LOCUS       DATILV010000001         1995 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2555739, whole genome shotgun sequence.
ACCESSION   DATILV010000001 DATILV010000000
VERSION     DATILV010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1995)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1995)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1995
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2555739"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1207)
                     /locus_tag="VLJ17_00005"
     CDS             complement(<1..1207)
                     /locus_tag="VLJ17_00005"
                     /inference="COORDINATES: protein motif:HMM:NF024800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSV21389.1"
                     /translation="MQGLASCGHCGRGLFTYYRGKKATPGYRCSANDLGEGGGHYCFS
                     VGAVGIDQAVAEAFLDAITPAAVEASVLALEQIEADRDAALQQWRLEVERARYEAQRA
                     ERRYKACDPENRLVARGLETEWEDRLRDLGAAENELRQREQQQPRQLTPEETQRIRTL
                     GVDLRQVWNAPTTMDRDRKELLRTLLEEVIIAIEEKPAYAKIRLRWKGGAMTSLEVAL
                     PHHAPPVLRTDEDTIQLLARLAPLYPDSVIAGILNRQGRKTARGERFTAGHVGNLRRS
                     HKMERFQPPADTSGELVTVQKAADILGVVPSTLHRWINAGVIAGEQLTPGAPWRIRMT
                     DELRARFVEQTPPDYLPMIEAGRKLGLPRQTVLQRVKRGELQAVYIRRGRRYGLRIRV
                     VEAQPNLFQQ"
BASE COUNT          401 a          658 c          513 g          423 t
ORIGIN      
        1 tttgctgaaa tagattcggc tgagcctcaa ccactctgat ccgtaagcca taacgtctac
       61 cgcgacggat atagaccgcc tgaagctcgc cgcgtttgac acgctgcaac acggtttggc
      121 gcggtagacc gagtttcctg cctgcttcga tcatcggcaa gtagtctggc ggcgtttgct
      181 ccacaaaccg agcacgtagt tcatctgtca tacggatgcg ccatggcgcg cccggagtca
      241 actgctcacc agcaatcaca cccgcgttaa tccatcgatg cagcgtcgat ggcacgacgc
      301 caagaatatc ggctgccttt tggaccgtca ccaattcgcc agaggtatcg gctgggggtt
      361 ggaaacgttc cattttgtga gagcgccgca gattgcctac gtgacccgcc gtgaatcgtt
      421 cgcccctggc cgttttccga ccctggcgat tcagaatgcc agcgatcaca ctgtctggat
      481 ataggggagc cagccgtgcc agaagctgga tcgtatcttc atcggtgcgg agaaccggag
      541 gtgcgtgatg cggcagcgca acttccagtg atgtcatcgc gccgcccttc cagcgcaggc
      601 ggattttcgc gtacgccggt ttttcttcga tggcgatgat cacttcctcc agaagagtcc
      661 gcagcagttc tttgcgatca cgatccatcg tcgtgggcgc attccaaacc tggcggaggt
      721 ccacgcccag cgtgcgaata cgttgggttt cctcaggcgt cagctggcgc ggctgttgtt
      781 gctcgcgttg acgcaattca ttttctgctg cccccaaatc gcgcagccgg tcctcccatt
      841 ccgtttccaa gccgcgagcc acaagacgat tttccgggtc gcatgctttg taacggcgtt
      901 ctgcgcgctg ggcctcataa cgcgcacgtt ccacctccag acgccactgt tggagcgcgg
      961 catcgcgatc ggcttcgatc tgctctaagg ctagtaccga cgcttctaca gcggctggcg
     1021 tgatggcatc cagaaacgcc tcggctacgg cttgatcgat gcccaccgca ccgacactga
     1081 aacaataatg gccgccaccc tcgcccagat cgtttgccga gcaccgatac ccgggcgtcg
     1141 ccttctttcc gcggtaatag gtgaacaggc cccggccaca gtgtccacaa ctggcgagcc
     1201 cttgcaacag agcgctgcct tctctcacgg cgcctccaga ctgatatcgt tcgacacggg
     1261 cgttgtttcg aatacgcacc tgattcgctt ggaacgtcgg ccaatccaga aacccaacat
     1321 gatgatcatg gatcaagacc ggccattccc tcatgggcaa gcgacggctt cgctttcgca
     1381 ctgcgccctg ttcatcgatg tatttctccg aacggttcct tccatacacg taagcgccgg
     1441 cgtagaccgg attcgtgagt acctgatgaa ccgattgata tgtcggcacg atccaccgga
     1501 tctcttccca agctctcgat tgtgaaggaa accgcaagcc ttgcccccga taccagagcc
     1561 aaacttgccg gaccgatccc atttccgcga aacgatccaa caccgtgcgg atcgcgccca
     1621 ccacggcctc gtccgcgtga aaacgcactt cgccatcctt atcgccccac accaatccca
     1681 ccggtaatcc gcgccgcagt tcgccacgtt ccgctttgtt tcgccggccc ccatcgagcc
     1741 gggcgcgaat gatgtgcagt tccgcttcgc tcatcgtccc tttcagccca agaatcagtc
     1801 gatcattgaa tagcgcagga tgatacaaac cgtcactatc gccgatcaac gtatcggtga
     1861 ctacgcacag gtccaacaga cgatgccaat cgcctccatt gcgcgccaga cgggaaacct
     1921 ccaggctgag gatgatcccc acccgcccca gcgccacttc cgacgtcatg cgtgcaaacc
     1981 cacctcgatg gcctg
//
LOCUS       DATILV010000002         5178 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_511363, whole genome shotgun sequence.
ACCESSION   DATILV010000002 DATILV010000000
VERSION     DATILV010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5178
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_511363"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(348..1274)
                     /gene="gcvA"
                     /locus_tag="VLJ17_00010"
     CDS             complement(348..1274)
                     /gene="gcvA"
                     /locus_tag="VLJ17_00010"
                     /inference="COORDINATES: protein motif:HMM:NF008352.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GcvA"
                     /protein_id="HSV21390.1"
                     /translation="MPNRRYSLPQLGFIQGFEAAARNLSFTKAAQELLITQSAVSRQV
                     KALEDHLGVALFERRQRALALTESGQALYRVATDVLERLQTAADQLRASGRTRQLSLT
                     TTTGFASLWLIPRLQRFTQLHPDIDVRISATTAVINLERSLVDLAIRYCRPEDVPEQA
                     TRLFGEEVVAVCSRSLLRDRSRPLRRPQDLKHHVLLHFDYAGAQQSLLDWGTWLTSLG
                     VGDLKPAGALHFSQYEQMIQAAISGQGVALGRQPLINDLLQSGALTAPFRRAVVGTRA
                     YFIIESEHGAAKPHVRQFAAWLVEEVKQNMLK"
     gene            1424..1723
                     /locus_tag="VLJ17_00015"
     CDS             1424..1723
                     /locus_tag="VLJ17_00015"
                     /inference="COORDINATES: protein motif:HMM:NF022592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2917 domain-containing protein"
                     /protein_id="HSV21391.1"
                     /translation="MTTHFADGPVRLNTGELLDINDGEGFVIKCLDGAVWITQSNDPR
                     DIVLGAAESFMLDKPGLALVCAAAGPAVIAVEASLRLLPWTRPWLRNAPHVRRAA"
     gene            1834..2472
                     /locus_tag="VLJ17_00020"
     CDS             1834..2472
                     /locus_tag="VLJ17_00020"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSV21392.1"
                     /translation="MNDLRSVEPPGLAFGRPDDKLRTQPHMVRLPDGEAAMVRAITPQ
                     DADRLQAYIRDLSASARRNRFLGGLSELAPTELVRLTHMDRPDELALIAFACVGGEEL
                     MVAEAVQVIAPERQRCEIALSVTDAWQRRGLGTLLLWNMECRARALGARYLIGEVLRT
                     NGAMKGLARKMGFEIRSPFTDALLVEIVKDLSMPQTGLPCREQFSERSSIAA"
     gene            2667..3092
                     /locus_tag="VLJ17_00025"
     CDS             2667..3092
                     /locus_tag="VLJ17_00025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21393.1"
                     /translation="MCDYSLEFVASRPAVVGDELVSTKFSNSITGGFAAAGEPNIAVC
                     LLPGTEIAFEKEVEYEQPLGFFPHLKPGKKLGAKVARFRQVKRDQPHVHHDALEFPDG
                     QIVLLTRLCEGQHATVLQLPAAPRTHEEAQEQKRVAIVA"
     gene            complement(3636..5066)
                     /gene="glnA"
                     /locus_tag="VLJ17_00030"
     CDS             complement(3636..5066)
                     /gene="glnA"
                     /locus_tag="VLJ17_00030"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HSV21394.1"
                     /translation="MFLNCATAQDVLKSIKDNNVRMIDLRFADLPGTWQHFSVPPNAL
                     SEDAMSEGIGFDGSSIRGFQEIQESDMLVVPDATTAFLDPFTMETTLVMVCNIRDPVT
                     GQSYSRDPRYIAQKAEDHLKRIGVADVSYFGPEAEFFVFNDVRYGQGINYAYHEIDSQ
                     EGIWNSGEEEGPNLGHKPRQKEGYFPVPPIDSMQDLRSEMALTMESLGIPVEAHHHEV
                     ATAGQAEIDMRFTTLTRMADSLMIYKYVVKNVANKHGMTATFMPKPLFEDNASGMHVH
                     QSLWRGSTNLFHSDRDYANLSELARFYIGGLLKHAWALCAFCAPTTNSYRRLVPGYEA
                     PINLVYSQRNRSACCRIPMYSPSPRAKRVEFRTPDPSCNGYLAFAAMLMAGLDGIANR
                     LDPGQPIDKNLYDLPPAEAKMVKSTPGSLSQALDALEADHSFLLRGEVFTADVIETWL
                     SYKRKKEVDAIALRPHPYEFHLYYDI"
BASE COUNT          993 a         1500 c         1631 g         1054 t
ORIGIN      
        1 ctttgttcag caaagagctt ggatggtttg gcccttggtg atacggctgt tcgtagaccg
       61 ggtagtcggc caaagcgtcg aacatacgtg ttctacactc tttgagatgc tcgggctcgt
      121 gacgaaatac acccaacatc aatttctcct gtgtattttc gatcagcggc tttcgctgtg
      181 ctcaagtcat ggcggcgtcg ctgtttggtg aggttaaggt caatcacgaa attgcctggg
      241 catgtgtttc accatgaagg caagccgcac ctacaaaacg cgttcgcatg cagcttgtct
      301 ttttgatcgc ccgcattcgt gacgccacga tccagatgtc cgcagcccta ttttagcata
      361 ttctgcttca cctcctccac aagccatgcg gcgaactgcc gaacgtgcgg ttttgcggcg
      421 ccgtgctcgg attcgatgat gaaatacgcc cgcgtcccga cgacggccct gcggaacggc
      481 gcggtcagcg cgcccgattg cagcaggtca ttgatcagcg gttgccgacc gagcgcaacg
      541 ccttggccgc tgatcgcggc ctggatcatc tgctcgtact ggctaaagtg cagcgcgccg
      601 gccggcttca agtcgccgac gccgagcgat gtcagccagg tgccccaatc caacagggac
      661 tgctgcgcgc ccgcgtagtc aaaatgcagc aagacgtggt gcttgagatc ctggggtcgc
      721 ctgagcgggc gcgaccggtc gcgtagcaac gatcggctac agaccgcgac cacttcttcg
      781 ccgaacaagc gggtggcctg ttccggcacg tcctccggac ggcaatagcg gatggcgaga
      841 tccacaaggc tgcgttccag gttgatcacc gccgtggtcg cagaaatgcg cacgtcgata
      901 tcggggtgga gctgggtgaa ccgttgcagg cgagggatca gccacaacga ggcgaacccg
      961 gtcgtggtcg tgagcgagag ttggcgggtt cggccggatg cgcgcaactg gtcagcggcc
     1021 gtctgcaggc gttcgagcac atcggtggcg acgcggtaga gcgcttggcc gctttcggtc
     1081 agcgccagcg cacgctgacg ccgctcgaag agcgccacgc cgaggtgatc ttcgagcgcc
     1141 ttgacctgcc ggctgacggc ggactgggtg attagcagct cttgcgcggc cttggtgaaa
     1201 ctcaggttgc gcgctgccgc ttcaaagccc tggatgaagc ctagttgcgg cagactatag
     1261 cgccggtttg gcattcgtag aactcatgga tggtgtgaga aatgttcgtt tgagccgcgc
     1321 ccgcgcacgg agcatcttag cgttcagacg caattggcgc gagtcgagcg gcaggttgca
     1381 tctgccccac tcatgcgccc cactcataca aggaaagacc gacatgacaa cgcattttgc
     1441 cgacggaccg gttcggctga acaccggcga actgctcgac atcaacgacg gtgaaggatt
     1501 tgtcataaag tgccttgacg gcgccgtttg gatcacccag tcgaacgatc cccgcgacat
     1561 cgtgcttggg gccgccgaat cctttatgct cgacaaaccg ggcctcgcgc tggtttgcgc
     1621 ggccgccggt ccggccgtga ttgcggtcga ggcttcgttg cggctgttgc cctggacgcg
     1681 cccatggctg cgaaacgccc cgcatgttcg acgtgcggcc tgaccgtgcc ccatgcgatg
     1741 gacgttacgc gtgttacttg ccgagcttca gcaaggcata gatggccggg acaagcccgg
     1801 cggtgacacc gtggatcgat caggaattgt gcgatgaacg atctgcgcag cgttgagcca
     1861 ccgggtctgg cctttggccg gcccgatgat aagctgcgca ctcagcctca catggtccgc
     1921 ctgccggacg gtgaggccgc aatggtgcgc gcaatcacgc cgcaggatgc ggatcggctg
     1981 caggcctata tccgcgatct ctccgcatcg gctcgccgca accgatttct cgggggcctg
     2041 agcgaactgg cgccgacgga gctcgtccgg ttgacgcaca tggaccgtcc cgacgaattg
     2101 gcgctgatcg ccttcgcatg cgtcggcggc gaagagctta tggttgccga ggcagttcag
     2161 gtgattgcgc cggagcgtca gcgctgcgaa atcgccctgt cggtgacaga cgcttggcag
     2221 cgccgaggtc taggcacgct gctgctgtgg aatatggaat gccgggcgag ggctctcggc
     2281 gctcgctatc ttatcggcga agtcttgcgg accaacggcg ccatgaaagg cttggcccgc
     2341 aagatgggat tcgaaattcg aagtcccttc acggacgcgc tgctggtgga gatcgtcaag
     2401 gatctctcga tgccgcagac cggactgccg tgccgcgagc agttctcgga gcgctcgtcg
     2461 attgcagctt gaggaggctg ccttcaaaag atgttgctgc gatgcaaaag catcttgctg
     2521 cttgtcacga tgtcgtgttt tgcaggcgcc ggatcatctc tcggcgctcg ccgcagctct
     2581 atcgacacga aaatgccacc gcagttgggc atccttgcag acaaaggaca accatactgg
     2641 ctgttcgcaa cagtggagga acttcaatgt gcgactacag tctggaattc gttgcatcac
     2701 gtcccgcagt ggtgggagac gaactggtat cgacgaaatt cagcaactca atcactggcg
     2761 gttttgccgc ggccggtgaa ccaaacattg cggtgtgcct tctgcccgga accgagatcg
     2821 cgtttgagaa ggaggttgaa tacgaacagc ctcttggatt cttcccgcac ttgaagcctg
     2881 ggaaaaagct tggggcgaaa gtggcgcggt tccggcaggt caagagggat cagccgcacg
     2941 tgcaccacga cgcactcgag ttccctgacg ggcagattgt gctgctcacc agactctgtg
     3001 aggggcagca cgcaactgtg ttgcaattgc ccgcggctcc acgcacgcac gaagaggcgc
     3061 aggagcagaa gcgggttgcc atcgtcgctt aatcgggtgg cacaacgcca gacgcgatcg
     3121 gcgtaggcaa agcggccggc ggcgggtttg gcatgatgcg aattccgccg tgcccaccgt
     3181 cggcgatgat gggggcacgg cgtgcggagc gcgccccttt gtgtccctac aagtgatacc
     3241 cgtcgacgga gggctttggc gcatttggga ctgttcgcca agttatgacg aagaaaacta
     3301 aaaccagagc ccgcgaccgg ctcgatgcag aacgtctgga aatggcgcag gcttaccgtg
     3361 gcccacttct tcgttgcgaa aacggctgac aagatcacaa tgcgcattct ggagggcgtt
     3421 gccgcctgaa ggttccgcct gcaaaaagca gctcgcaaga gaaaacgatc gatgccgcaa
     3481 taattcccca cgatttcatg gtttctcttc ctatcggcac ggatcgctgc gcgccaggcg
     3541 gcaggtgggt aaagacgcgc gaagagcgcg cccttgccca ccctacaagt gtcccgtcga
     3601 ccgaaacctt cttcgagaag cgaacgcggg cgcgatcaga tgtcgtaata gagatggaat
     3661 tcgtaagggt ggggccgcag cgctatggca tcgacctcct ttttgcgttt gtaggagagc
     3721 caggtttcga tcacgtccgc ggtgaagacc tcgccgcgca gcagaaacga atgatcagct
     3781 tcaagggcgt cgagcgcctg cgatagcgat ccgggcgttg acttcaccat cttggcctcc
     3841 gccggcggca ggtcatagag gttcttgtcg atcggctggc cgggatcgag gcggttggca
     3901 atgccgtcga ggccggccat cagcatcgcg gcgaacgcca agtagccgtt gcaggacggg
     3961 tcaggggtgc ggaactcgac gcgcttggcg cgcgggcttg gcgaatacat aggaatcctg
     4021 cagcaggccg agcggttgcg ttgcgaatac accagattga tcggcgcctc gtaacccggc
     4081 accagccggc gataggagtt cgtcgtcggc gcgcaaaatg cgcagagcgc ccaggcgtgt
     4141 ttgagtaggc cgccaatgta aaagcgggca agttcgctca ggttggcgta gtcgcgatcg
     4201 ctgtggaaca gattggtgct ccccctccac aagctctggt gcacgtgcat tcccgacgcg
     4261 ttgtcctcga acagcggctt cggcatgaaa gtcgccgtca tgccgtgctt attggcgacg
     4321 ttcttcacca cgtatttgta gatcatcagg ctgtcggcca tgcgcgtcag cgtggtgaac
     4381 cgcatatcaa tttccgcctg gcccgcggtc gccacctcgt ggtgatgggc ttcaaccgga
     4441 atgccgagtg actccatggt cagcgccatc tcactgcgca ggtcctgcat gctgtcgatc
     4501 gggggaaccg ggaagtagcc ctccttctgg cgcggcttgt ggccgagatt ggggccttct
     4561 tcttctcctg aattccaaat gccttcctga gagtcgatct cgtgataggc gtagttgatg
     4621 ccctggccat aacgcacgtc gttgaacacg aagaactccg cctccggccc gaaataggag
     4681 acatcggcaa cgccaatgcg cttgagatgg tcctcggctt tctgggcaat gtagcggggg
     4741 tcccggctgt aagattggcc ggtgaccggg tcgcggatgt tgcagaccat gaccagtgtc
     4801 gtttccatcg tgaacgggtc aagaaaggcc gtggtggcgt cgggtacgac cagcatgtcg
     4861 ctttcctgga tttcctgaaa gccgcggatt gacgacccgt cgaagccgat gccttcgctc
     4921 atggcgtctt cgctgagcgc gtttggcggg accgaaaaat gctgccaggt gccgggcaag
     4981 tcggcgaagc gcaagtcgat cattcgaacg ttgttgtcct ttatggactt gagaacatcc
     5041 tgggccgtcg cacaattaag aaacataggc tgcctcccgt ctccaatggc ggttccttgt
     5101 ttggttttcg gaaacgccgt tcagctttca gtcggtgcgc cagagcgcgc tccgatgaga
     5161 ttgtccttcc cccccgcc
//
LOCUS       DATILV010000003         1560 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2045220, whole genome shotgun sequence.
ACCESSION   DATILV010000003 DATILV010000000
VERSION     DATILV010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1560
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2045220"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            54..803
                     /locus_tag="VLJ17_00035"
     CDS             54..803
                     /locus_tag="VLJ17_00035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009026010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSV21395.1"
                     /translation="MGKLQGKIALVTGGNSGIGLATAKRFVNEGAYVFITGRRDPELL
                     AAAKEIGRNVTAIQGDVSNLDDLDRLFAQIKREKNKLDVVFANAGLAKFAPLGQITEQ
                     LYDSIFNVNVKGLLFTVQKALPLLPDGASIILNASIVASKGLPMNSVYSATKAAVRSF
                     ARTWTTDLKERRIRVNAVSPGSTDTPGLSDLLASTEVGQQRLKMISSSVPLGRLGTSD
                     EIAKAVVFLASDDSSYITGVELFVDGGMAQV"
     gene            complement(943..>1560)
                     /locus_tag="VLJ17_00040"
     CDS             complement(943..>1560)
                     /locus_tag="VLJ17_00040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21396.1"
                     /translation="SYTWSKVLDTTPDATSVVPGNAGDDAKVARDTLLPNLDRGPGAS
                     DIRHRLVLSGVWEINYANSISNPALRGFLNNWQLGLITQAQSGRAFNDITTGDPGNDS
                     NTANDRTPVVGRNTIRGPEFATVDVRLSKDVPLQSERVRLRLIAEMFNATNRANINGV
                     LTTRYSFSGGFFRPLANPAVPSTAFGYAQSSYDPRILQLAAKIIF"
BASE COUNT          339 a          424 c          475 g          322 t
ORIGIN      
        1 actggaattg cccttgcttc gcagttggat aaactaacag atcggagaaa catatgggca
       61 aactccaagg gaaaattgca ttggtcaccg gcggcaatag cggtattggc ctcgcaacag
      121 cgaagcggtt tgttaacgaa ggggcgtatg tcttcataac ggggcgtcgc gatccggagt
      181 tgttggcggc ggcaaaggaa atcggaagaa acgtaacggc tatacaaggg gacgtgtcga
      241 acctcgacga tctggatcgc ctctttgctc aaatcaagcg cgagaagaat aagctcgatg
      301 tggtgttcgc aaatgccggc ctcgcgaagt ttgcgcccct gggccagatc acggagcagt
      361 tgtacgactc gatcttcaac gtcaatgtca aaggccttct cttcactgtg cagaaagcgc
      421 ttcctctctt gcccgatggc gcgtcgatca tcttgaatgc atccattgtg gccagcaaag
      481 gattgccgat gaacagcgtg tatagcgcaa cgaaggcggc ggtgcgctct tttgcccgga
      541 catggacaac agacttgaag gaacgccgca ttcgcgtgaa cgccgtcagt ccgggatcga
      601 ctgacacgcc aggactcagt gacctgctcg cttccacaga agtgggccag caacgcttga
      661 agatgatctc cagcagcgtg ccgctaggcc ggctcggcac atctgatgag atcgcgaagg
      721 cggtggtgtt tctcgcgtcg gatgacagca gctacatcac gggcgtggaa ttgtttgtcg
      781 atggcgggat ggcgcaggtc taggcggtta attctggtaa acatgtccgc accatgctcg
      841 accgggtcat cgcatgggcc ggcgcgctaa agacgctgag aggctgatgc ggattcagcg
      901 gattgaaatc cgttgaatcc gcgtaatccg cgcagtccgc ggtcagaaga tgattttcgc
      961 agcgagctgg aggatgcggg gatcgtacga cgactgcgca taaccgaatg ccgtcgacgg
     1021 gaccgccgga ttcgccagcg gacggaagaa acctccgctg aagctgtagc gtgtggtcag
     1081 aaccccgttg atattggcgc gattggttgc attgaacatt tctgcaatga gccgcagccg
     1141 cacgcgctcg ctttgcagcg gcacgtcctt gctcaggcgt acgtccacgg tggcgaattc
     1201 gggaccgcgg atggtgttgc gtcccacaac cggcgtgcga tcgtttgctg tgttgctgtc
     1261 attaccggga tcgcccgtcg tgatgtcgtt gaacgcgcgg cccgactgag cctgcgtaat
     1321 gagcccgagc tgccaattgt tgagaaaccc tcgcaacgcc ggattcgata tcgaattcgc
     1381 gtaattgatt tcccagacgc ccgacaatac caaccggtga cggatgtcgg acgctcccgg
     1441 accgcgatcg agattgggca gcagcgtatc gcgcgccacc ttcgcatcgt ctcccgcatt
     1501 acccggcaca acggacgtgg catccggcgt cgtgtcgagc actttcgacc aggtataaga
//
LOCUS       DATILV010000004         5214 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2300894, whole genome shotgun sequence.
ACCESSION   DATILV010000004 DATILV010000000
VERSION     DATILV010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5214)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5214)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5214
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2300894"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(49..1758)
                     /locus_tag="VLJ17_00045"
     CDS             complement(49..1758)
                     /locus_tag="VLJ17_00045"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HSV21397.1"
                     /translation="MHSRYGHFNLLAGAALLVAAPAIAADVTPQRLVNADNETSNWLM
                     NHRTYDSQRYSPLDKINKTTVKNLRLAYAVAIGGAAVNENLEATPLAEDGFLYVVDAW
                     GVVYKIDARSGDAGRIVWRMDPGQEKMPDANRGAALWGGFVISVANYPPRVIATNKET
                     GKVAWETNLSDGQANLQFTAAPQAVKDKIILGASGGDNGARDFVVAVDAATGKFAWRQ
                     YIVPAPGEPGSETWKDKNNAWQTGGGALWVTGSYDATTNQILWGTGNPVPWSDPYYRP
                     GDNLFTESLISWDPDTGNMNWYHQYLPGDMWDYDEEGSNILIDGIVDGQPRKVVTHAA
                     RNGFLYTFERTNGLPLLAKPYVERINWTKGIDQKTGKPLDYDPNRDVQVYSGRQNYTL
                     AEPTKVLCPSLAGGNNYFPASYSKRTGLMYIPSMSMCNESTLDQEAIKKGVYFSRISK
                     QIERNESDIVVADPLTGEVKKRIHSVYPNVSGMLTTAGGLVLTGFADGTVAAYDDVTL
                     EQLWKLNVGTGINAPPMTFEAGGKQYIAILTGLSRPSKGRLLLTPELRDMRHQTMMFV
                     FAL"
     gene            complement(2021..3742)
                     /locus_tag="VLJ17_00050"
     CDS             complement(2021..3742)
                     /locus_tag="VLJ17_00050"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HSV21398.1"
                     /translation="MRSNHVFSPRQLLLASSFTMAVAPALAADVTSDRLVNADREPQN
                     WLMNHRTYDAQRYSPLDKINKANIKDLKLAYAVAIGGTSANENLESTPLAEDGFLYIV
                     DQWGVLYKIDARSGDAGRIMWRMDPGQEKVPLSNRGAALWGNFVITVANYPARAIATN
                     KETGKVAWEANLADGQTDLQLTAAPLAVKDKVIIGAAGGDRGVRDFIAALDGATGNVM
                     WKKYVIPAPGEPGSETWKDKNNAWQTGGGAMWITGSYDVGTNQVLWGTGNPVPMFDPY
                     YRPGDNLYTNSLISWDPDSGKMNWYHQYTPGDMWDYDASGTHILIDGQVAGQARKLVT
                     HSGRNGFLYAFDRANGQTLLAKPYLETINWTKGIDQKTGMPIDYDPNRDVQVYSGGQT
                     MTLADRTKKLCPSMSGGNNFWSAAYSPRTRLLYIPSATSCNEVSLDPNLSNKAGDWKG
                     ATFRHIERNESEIIVADPFTGEVKKRMHSAYPNNSAALTTAGGLLFTGLTDGTFMAYD
                     DMTFETLWKINVGTGFNAPPMTFETGGKQYVAILAGLSPIARRRHLFTPELREMRNQT
                     MLFVFGL"
     gene            complement(3812..4594)
                     /locus_tag="VLJ17_00055"
     CDS             complement(3812..4594)
                     /locus_tag="VLJ17_00055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21399.1"
                     /translation="MGRIVALSTGGALLAAGAVSGAVQSAGADTLVENSAEFRFQLDF
                     RVNDAALQKLLPAGWETVIATQGPAKDANLRLIFIDRVDVTNPDNTPKTTDQLVYIAI
                     PVKQTGTNNAGQMIINGLVSDAKEAPGPFGSYAHASSVKASRSFNTANGVTLGEENWE
                     FIGPNGERLETHIKYERGPARRNPSTEVKFFYPGNPSAYQIFKVDSGLDIMKNASVPV
                     KDRVKEFSYKATGGNIGALFDGTEKVLSWDSFHWYNRGIYMP"
     gene            complement(4681..>5214)
                     /locus_tag="VLJ17_00060"
     CDS             complement(4681..>5214)
                     /locus_tag="VLJ17_00060"
                     /inference="COORDINATES: protein motif:HMM:NF023742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSV21400.1"
                     /translation="ERKAALFRLYPTPQQASQMAQIAGACRFVYNLALEQRRDWYRAG
                     RTFTFASQCRELTQLRAQEDWLKAAPVHPLQQALRDLERAYRNWWEGRTRPPTPRRKG
                     INDSFRFPDPASLAVKRTGKSSGRIKLPKLGWIRLRERNWRAMPGEIRNVTISPHPVP
                     FPRKPGGGAARSVKKML"
BASE COUNT          931 a         1541 c         1628 g         1114 t
ORIGIN      
        1 acggcagctt cgagaatgcg cccgccctca atttgcgcct gccctcaatt acagtgcaaa
       61 cacgaacatc atcgtttgat ggcgcatgtc gcgaagctct ggcgtcaaca gcaaccgccc
      121 cttcgacggc cggctgaggc cggtcaggat ggcgatgtat tgcttgccgc ccgcctcgaa
      181 ggtcatgggt ggggcgttga tcccggtccc gacattgagc ttccacagtt gttcgagggt
      241 gacgtcgtca taggccgcga cggtaccatc ggcgaagccg gtcaacacga ggccgcccgc
      301 tgtcgtgagc atgccgctga cattcggata gacggaatga atgcgcttct tgacctcgcc
      361 ggtcagaggg tcggcgacca cgatgtcgga ttcgttgcgc tcaatctgct tagagatgcg
      421 gctgaagtag acgcccttct tgatcgcctc ctgatcgagc gtcgactcgt tgcacatcga
      481 catggagggg atgtacatga ggcctgtgcg cttgctgtag gacgccggga agtagttgtt
      541 gccacccgcc aaagatgggc acaacacctt ggttggctcc gccagggtgt agttctgccg
      601 gccggaataa acctgaacat cgcgattggg atcatagtcg agcggcttgc cggtcttctg
      661 atcgatgccc ttggtccagt tgatacgctc gacataaggc ttcgccaaca agggcagccc
      721 gttcgtgcgc tcgaaggtat agaggaagcc gttacgcgcc gcgtgggtga cgaccttgcg
      781 aggttggccg tcgacaattc cgtcgatcag tatgttcgag ccttcctcgt cgtagtccca
      841 catgtcgccg ggcagatact gatgatacca gttcatattg ccggtgtcgg gatcccagga
      901 gatgaggctt tctgtgaaca gattatcgcc cggccggtag taaggatcag accacggcac
      961 cggattgccg gtgccccata gaatctggtt tgtcgtggca tcataggagc cggtcaccca
     1021 cagggcaccg ccaccagtct gccacgcgtt gttcttgtcc ttccaggtct cgctgccggg
     1081 ctcgccgggc gccgggacga tgtattggcg ccaggcgaac tttccggtcg cggcatcgac
     1141 cgcaactacg aaatcgcgcg cgccgttatc gccgccggag gcaccgagaa tgatcttgtc
     1201 cttgacggcc tgaggtgccg cggtgaattg caggttggcc tgtccgtcgg agaggttggt
     1261 ttcccacgcg accttaccgg tttccttatt cgttgcaatc acacggggcg gatagtttgc
     1321 gaccgaaatc acaaagccgc cccacagcgc agcgccgcga ttggcatccg gcattttctc
     1381 ctggcccgga tccatgcgcc acacgatccg accggcgtcg cctgagcggg cgtcgatttt
     1441 atagacgacg ccccatgcat cgacgacata gagaaatccg tcctccgcaa gcggcgtcgc
     1501 ctcgagattt tcgttcaccg cagcgccgcc gattgcgacc gcgtaagcga gcctgagatt
     1561 cttgacggtc gtcttgttga tcttgtcaag cggagaatag cgctgggagt cataggtacg
     1621 gtgattcatc agccaattgc tggtctcgtt gtcggcattg acgagccgct gcggcgtaac
     1681 atcggcagcg atggccgggg ctgcgaccaa cagggcagcg cccgcgagca gattgaaatg
     1741 accgtaacgc gaatgcatgg tggcctccct gggttgtcgt tggcgccgcc tttacagcgt
     1801 taagtgccaa acctgatttg gcacggcgag gcgccttatt ttacctcccc cctgtgggga
     1861 gagcggattt ctgagcgtag cgaagaattc gggtgacggg tatctctctc catcgtccga
     1921 gcagccctcc ttgcaggcgc gcggagcctg tcatcgggcc ggccggaggc cggacccgtt
     1981 cgatcgccga caacctctct ctccgagcga ggtgaggggc tcacagcccg aacacgaaca
     2041 gcatggtctg gttgcgcatt tcacgcagct ccggcgtgaa caggtggcgc cgtcgtgcga
     2101 tcgggctcag ccccgccagg atcgctacgt attgcttgcc gccggtctcg aaggtcatcg
     2161 gtggcgcatt gaagccggtt ccgacgttta tcttccacag cgtttcgaac gtcatgtcgt
     2221 catacgccat gaatgtcccg tcggtgagac cagtgaacag caagccgccg gcggtcgtga
     2281 gcgccgcact gttgttggga tacgcgctgt gcatgcgctt cttgacctcg ccggtgaacg
     2341 gatccgcgac gatgatctcg gattcgttgc gctcgatatg cctaaacgtt gcgcctttcc
     2401 agtcgcccgc cttgttggag aggttggggt cgagcgagac ctcgttgcag gacgtggccg
     2461 acgggatgta aaggagcctg gttcgcgggc tgtaggccgc ggaccagaaa ttgttgccgc
     2521 cggacatcga cgggcacagc ttcttggtgc ggtccgccag cgtcatggtt tgcccgccgg
     2581 aatagacctg gacatcccgg ttcgggtcgt agtcgatcgg catgccggtc ttctggtcga
     2641 tgcccttcgt ccagttgatg gtttccagat atggtttggc gagcagcgtc tgtccgttgg
     2701 cgcggtcgaa cgcgtagagg aaaccattgc ggccggaatg ggtgacgagc ttgcgcgcct
     2761 ggccggcaac ctgtccgtcg atcaggatat gggtgccgga cgcatcgtaa tcccacatat
     2821 cgccgggcgt atattggtgg taccaattca tcttgccgct gtcgggatcc catgagatca
     2881 ggctgttggt atagagattg tcgcccgggc gataataggg atcgaacatt ggcaccggat
     2941 tgccggtgcc ccacagcacc tgattggtgc cgacgtcgta agagccggtg atccacatgg
     3001 cgccgccgcc ggtctgccag gcgttgttct tgtccttcca ggtctcgctg cccggctcgc
     3061 cgggggcggg gatgacgtac ttcttccaca tcacgttgcc ggtcgcaccg tcgagcgccg
     3121 caatgaaatc gcgcacgccg cggtcaccgc cggcggcacc gatgatgacc ttatccttca
     3181 cggcaagtgg agccgcggtg agttgcagat cggtttgacc atcggcgaga ttggcctccc
     3241 acgccacctt gccggtctcc ttgttggtgg cgatcgcgcg ggccggatag ttcgcgaccg
     3301 tgatgacgaa gttgccccac agggcggcgc cgcgattgga gagtggcacc ttctcctggc
     3361 ccggatccat gcgccacatg atgcgcccgg catcgccgga gcgagcgtcg atcttgtaga
     3421 gcacgcccca ttgatcgacg atatagagga aaccgtcctc ggcaagaggc gtcgattcaa
     3481 gattctcgtt cgccgaggtg ccgccgatcg ctaccgcata ggcgagcttc aaatccttga
     3541 tgttggcctt gttgatcttg tcgagcggcg aatagcgctg cgcatcatag gtgcgatgat
     3601 tcatcagcca attctgcggc tcacgatccg cattgaccaa gcggtcggat gtaacgtcgg
     3661 ccgcgagggc tggcgccacc gccatcgtga aggaactcgc gagcagcaac tggcgtggcg
     3721 aaaaaacgtg attggaacgc atgggcctcc tccctatttg atgtcgttgc acgacttgta
     3781 gcccagatgg agccaaggac aagagctact cctacggcat atatattccg cggttatacc
     3841 agtgaaacga atcccagctc agcaccttct cggtgccgtc gaatagtgca ccgatgttgc
     3901 cgccggtcgc cttgtaggaa aattctttca cccgatcctt caccggaacg gacgcgttct
     3961 tcatgatgtc gagccctgaa tcgaccttga agatctgata agcgctcgga ttgcctggat
     4021 agaagaactt gacttccgtg ctcggattgc gccgcgccgg accgcgttcg tattttatat
     4081 gcgtctccag gcgctcgcca ttggggccaa tgaactccca gttctcctcg cccaaggtca
     4141 ctccgttggc ggtgttgaac gagcgcgagg ccttgacgga agacgcgtgc gcgtagctgc
     4201 cgaatggacc tggtgcttcc ttggcgtcag agacgaggcc gttgatgatc atctggccgg
     4261 cgttgttggt tccggtctgt ttgaccggga tcgcgatata gacaagctga tcggtcgtct
     4321 tcggtgtgtt gtcggggttg gtgacgtcga ctcggtcaat gaaaatcagg cgcagattgg
     4381 cgtccttagc ggggccctgt gtggcaatca cggtctccca tccggccggc agcagcttct
     4441 gcagcgccgc atcgttgacg cggaaatcga gctggaagcg gaattccgcg ctgttttcga
     4501 ccaacgtgtc ggcacccgca gattgcacgg cgccgctcac cgcgccggct gctagcaacg
     4561 cgccacccgt gctcaaggcg acgatcctac ccatgacgtc ctcccatctt ggcgttgttc
     4621 gtccggcctg acggacggtt cgtacctggt gccattatca cgaagatagt gcccggctgg
     4681 ctagagcatt tttttgacgg accgtgcagc tccccctccc ggcttgcggg gaaacgggac
     4741 ggggtgaggc gagatcgtga cgttgcggat ttcgcccggc atcgcgcgcc agttgcgctc
     4801 acgcagccgt atccagccga gcttcggaag cttgatgcgc ccggatgatt tgccggtgcg
     4861 cttaaccgcc agcgacgccg gatcgggaaa gcggaaactg tcgttgatgc ctttccggcg
     4921 cggcgtcggt gggcgtgtcc gtccttccca ccagttccga taggcgcgct cgaggtcgcg
     4981 taacgcctgt tgcagcggat gaaccggcgc ggcctttaac caatcctcct gggcgcgcag
     5041 ttgggttagc tcgcggcatt gactggcaaa agtgaacgtg cggcccgcac gataccagtc
     5101 gcggcgctgc tcaagagcga ggttatagac gaaccggcac gcacccgcga tctgcgccat
     5161 ttgtgacgcc tgttgaggtg tcgggtagag gcggaacaga gcggccttgc gttc
//
LOCUS       DATILV010000005         2309 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1534320, whole genome shotgun sequence.
ACCESSION   DATILV010000005 DATILV010000000
VERSION     DATILV010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2309
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1534320"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2309)
                     /gene="polA"
                     /locus_tag="VLJ17_00065"
     CDS             complement(<1..>2309)
                     /gene="polA"
                     /locus_tag="VLJ17_00065"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HSV21401.1"
                     /translation="IPILEQKGFEADDLIGTLARKAAAESYLVYVVSSDKDMLQLVTD
                     KVLVLNPPKDNLIADAAKVEEILGVPPERVVDVMALRGDSIDNIPGAPGIGDKGSVEL
                     IKRFGTVEQALDRAAEVEKKTYRESLLNNREVVLFSKRMATIDCNVPVELDLNAMKAG
                     EPDIATLRQLFFELEFTSLLKELLPVVEVTEAQYTEAKSPADVEAILKSVTADEPLNI
                     ALEAASAAGLEEQEEVEEQELEDGMLPLQMGDPIEPALPITRNIAISSTTGTGTIVSL
                     NSEAGSKLKSALANERIAKSVHDYKAALHALNAAAIEFSGVHHDSRLYSYLLDPTYSS
                     HGLAEVALRRLNLKLSGNLAESADVTGRLAAALAHEVEQNGLMKTYRDIDLPLVPVLA
                     RMEEAGVKIDKDALARMSTRLEGEIDAKAREIYSQCGVEFNIGSPKQLGDVLFNKLNL
                     PKPVKYGKGKMISTAVDVLEGLAANHTVPRLVLEYRQLSKLKSTYVDTLPALLSPATG
                     RLHTTFDQTGTATGRLSSANPNLQNIPIRTELGREIRAAFTVEPGHVLLAADYSQIEL
                     RLLAHFSNDVLLVEAFNRGDDVHTLTASQVFGVPPLMVTPDHRRAAKVVNFGIVYGLS
                     PFGLSQNLGIEPGEAKQFINAYFEKYSGVRAFIAKTLDDARHQQHVKTLFGRIRPIPD
                     INAKNVQQRGFAERTAVNTPLQGTAADLIKIAMIRIDEAVRDRNLKSRMTLQVHDELV
                     FEVPEEELDVMRSLVREYMEKVYPLSVPLV"
BASE COUNT          449 a          667 c          685 g          508 t
ORIGIN      
        1 accaagggga cggagagtgg atacaccttc tccatatact cgcgaaccag ggaacgcatc
       61 acgtctaact cttcttccgg aacttcgaag accagttcgt catgcacttg cagggtcatg
      121 cgcgatttca gattgcggtc gcggacggct tcgtcaatgc ggatcatcgc aatcttgatc
      181 agatcggccg cggtgccttg cagcggcgtg ttgaccgccg tgcgttcggc gaaaccgcgc
      241 tgctgcacgt tcttcgcatt gatatcgggg atgggtcgaa tgcgtccgaa cagcgtcttg
      301 acatgttgct ggtggcgggc atcgtcgagc gtcttggcga tgaatgcacg cacgccgctg
      361 tacttctcaa agtaggcatt gatgaactgc ttggcctcgc cgggctcgat gccgagattt
      421 tgggacaagc cgaagggcga caggccgtac acaatcccga aattcacaac cttcgccgcg
      481 cgacggtggt ctggcgtgac catcaacgga ggcactccga acacttgcga cgcggtcagc
      541 gtatgcacat cgtcgccgcg attgaaggct tcaaccagaa ggacgtcgtt ggagaagtgc
      601 gccagcagcc ggagttcaat ctgcgagtag tcggcggcga gaagaacatg gccgggctcg
      661 accgtgaatg cggcgcgaat ctcgcgaccg agttcagtgc gaatgggaat gttctgcaga
      721 ttcggattgg cggacgagag acggcccgta gccgtgccgg tttgatcgaa cgtcgtgtgc
      781 agtcgcccgg tcgccgggct gagcagcgcg ggcagcgtat cgacgtaggt cgacttgagt
      841 ttcgagagct ggcggtactc gagcacgagg cgcggcaccg tgtgattcgc cgccagccct
      901 tccagcacat ccacagcggt tgaaatcatt ttgcccttgc cgtatttcac gggcttcggc
      961 aggttcagct tattgaaaag cacgtccccc agttgcttgg gcgatccgat gttgaactcg
     1021 acgccgcatt ggctgtagat ctctctggcc ttggcatcga tctcgccctc cagccgcgtg
     1081 gacatgcgcg cgagcgcgtc cttgtcgatc ttgacgccgg cttcctccat gcgtgcaagc
     1141 accgggacca gcggaaggtc gatgtcccgg taggttttca tcaatccatt ctgttcgacc
     1201 tcatgtgcga gggccgcagc caagcgcccg gttacatcag ccgattcggc aagattgccg
     1261 gagagcttca gattcaaacg acgcaaggca acctcagcca gaccatgaga cgagtaagtc
     1321 ggatccagca gataggaata aagccgcgaa tcatggtgta cgccggagaa ttcgatggcc
     1381 gcggcattga gcgcatgcag tgctgccttg tagtcgtgga cggatttcgc gattcgctcg
     1441 ttggccagcg ccgattttaa tttcgatccg gcttcggagt tgagggaaac gatggtgcct
     1501 gtgccggtgg ttgatgagat agcgatgttg cgcgtaatgg gcagcgccgg ctcgatagga
     1561 tcccccatct gcagaggtag catgccatct tcgagttctt gctcctcgac ctcttcctgc
     1621 tcctccaacc ctgccgcaga ggccgcctcg agggcgatgt tcagcggttc gtccgccgtc
     1681 acactcttca aaatggcctc gacgtccgcg ggcgattttg cctctgtata ctgcgcttcc
     1741 gtcacttcaa ccaccggtaa cagttctttc agcagtgacg tgaactccag ttcaaaaaaa
     1801 agttggcgca atgtcgcaat gtcgggctcg ccggctttca tcgcgttgag gtcaagttcg
     1861 accggcacat tgcagtcgat ggtcgccatg cgcttgctga acagaacgac ctcgcgattg
     1921 ttcaacaacg actcgcggta agtcttcttc tcgacttcgg cggcccgatc gagcgcctgc
     1981 tccaccgttc cgaaacgctt gatgagttcg actgaacctt tgtcgccgat gcccggagcg
     2041 cccgggatat tgtcgatcga gtctccacgc agagccatca cgtcgacgac ccgctcgggc
     2101 ggcacaccga gaatctcttc tactttcgct gcgtcggcga tgagattgtc tttcggcgga
     2161 ttcagaacca ggaccttgtc ggtgaccaac tgcagcatgt ccttgtcgct ggagacgacg
     2221 tagacgagat aggactcggc cgcggctttg cgcgctagcg ttccaatcag gtcgtcggct
     2281 tcgaacccct tttgctccag aataggtat
//
LOCUS       DATILV010000006         5239 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2556736, whole genome shotgun sequence.
ACCESSION   DATILV010000006 DATILV010000000
VERSION     DATILV010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5239)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5239)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5239
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2556736"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..635)
                     /gene="dapB"
                     /locus_tag="VLJ17_00070"
     CDS             complement(<1..635)
                     /gene="dapB"
                     /locus_tag="VLJ17_00070"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HSV21402.1"
                     /translation="MSDMRLVVAGAGGRMGRTVIKAIAETDGVVLTGAVEAPGAAEIG
                     RDAGELAGLGPNGIAVSTYAPTLLAQADGLIDFTIPVATMTLAEQGAAYGLVHIIGTT
                     GLAAKDEMIIAAAASQARIVKSGNMSLGVNLLAALVKRVAKTLDDEFDIEILEMHHGK
                     KIDAPSGTALLFGVAAAAGRGIDLAVRSVRARDGHTGARKAGDIGFASLRGG"
     gene            complement(688..990)
                     /locus_tag="VLJ17_00075"
     CDS             complement(688..990)
                     /locus_tag="VLJ17_00075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009031324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1330 domain-containing protein"
                     /protein_id="HSV21403.1"
                     /translation="MAKGYWFVQVDVADPERYKNYVTANQIAFRKYGARYVVRAGRYE
                     AVEGTCRPRLVVIEFADYETALACYRSPEYQHAITLRRGHAIADVAIVEGYDGPQP"
     gene            complement(1001..1702)
                     /gene="pyrF"
                     /locus_tag="VLJ17_00080"
     CDS             complement(1001..1702)
                     /gene="pyrF"
                     /locus_tag="VLJ17_00080"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0044205 - 'de novo' UMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HSV21404.1"
                     /translation="MLEARDRLIVALDVPSVAAAEAMVDRLGDTVAFYKIGYQLAFVG
                     GLPFAETLIRSGKRVFLDLKLHDIGNTVAKGVESVAQLGATFLTVHAYPQTMRAAVEA
                     RGDTGLRILAVTVLTSYDDADLAAAGYDFTVAELAAERAAQAHDIGVDGLVCSATEAA
                     KLRPIVGPSMALVTPGIRPVGVDTDDQKRVMTPAQAIAAGANYLVVGRPILEAPDPNA
                     VAATILKEIAAAAGN"
     gene            complement(1721..2302)
                     /locus_tag="VLJ17_00085"
     CDS             complement(1721..2302)
                     /locus_tag="VLJ17_00085"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HSV21405.1"
                     /translation="MRSPKILTFAGSTRTASFNARLAALAAKELALLNVDVTRISLLD
                     YPLPLYHGDLETEQGIPANAEKLKRLFGIHHGIFITSPEYNASITPLLKNALDWISRV
                     REPPEPPLAAYRERVFALGAASNGTFGGYRSLIALRHVLELGCGAIVLPQQIAVSEAA
                     TAFDDLDNLRDERHSEKLRSVLGKLVESARHFV"
     gene            complement(2335..2937)
                     /locus_tag="VLJ17_00090"
     CDS             complement(2335..2937)
                     /locus_tag="VLJ17_00090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA adenine N-6-methyltransferase family
                     protein"
                     /protein_id="HSV21406.1"
                     /translation="MSFQSTLSIAKRTLRLDDEVHFIRCWMEKPLATGAVMPSGKPLA
                     RAMAKCVDPKMEGPVIELGPGTGAVTAALVEQGIEPSRLVLVEFNPTFCRLLRTRYPE
                     ATVVQGDAYGIKRLLASLLRQPAAAVVSGLPLFTKPLKLRLRLLADAFTLLAPGAPFV
                     QFTYAVVPPIPRSYSGARALASERIWLNIPPARVWIYRKA"
     gene            complement(3026..4156)
                     /gene="dnaJ"
                     /locus_tag="VLJ17_00095"
     CDS             complement(3026..4156)
                     /gene="dnaJ"
                     /locus_tag="VLJ17_00095"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HSV21407.1"
                     /translation="MSKRDYYEVLGVQRDANDADLKTAYRKLAMKFHPDRNPGDDEAE
                     HRFKEVNEAYEVLKDGDKRAAYDRFGHAAFEQSGGGPGFGAEFASSFADIFDDFFGMG
                     GGRRSRGSGRERGADLRYNMELTLEEAFSGKGAQIRIPASVTCETCGGNGAKAGTKPK
                     VCATCGGQGKIRHAQGFFTLERTCPSCHGRGQVIDTPCGTCGGLGRTTRERALSVNIP
                     AGVEDGTRIRLSGEGEAGLRGGPAGDLYIFLSISAHPFFQRDGADLHCRAPISMTTAA
                     LGGEFEVPTIDGGRTRVKIPDGTQSGRRFRLQAKGMPVLRSKQLGDMYVQVVVETPQN
                     LTKRQRELLSEFQRLSSNETNPESAGFFGRVKEFFGTRAGSA"
     gene            complement(4332..>5239)
                     /locus_tag="VLJ17_00100"
     CDS             complement(4332..>5239)
                     /locus_tag="VLJ17_00100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012169221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Hsp70 family protein"
                     /protein_id="HSV21408.1"
                     /translation="MPKIQEVVKQFFGREPHKGVNPDEVVAVGAAIQAGVLQGDVKDV
                     LLLDVTPLSLGIETLGGVFTRIIDRNTTIPTKKSQVFSTAEDNQNAVTIRVFQGEREM
                     AADNKLLGQFDLVGIPPAPRGVPQIEVSFDIDANGIVNVQAKDKATGKEQQIRIQASG
                     GLSESEIQKMVKDAEAHAEEDKKRKAAVEAKNHAEALVHSTEKALSEHGTKVGEGERR
                     AIETALADLKEALKGDDTDAITAKMNALAQASMKLGEAMYKQTEGSPGAAGPEAGGPG
                     GSKKDDVVDAEFTEVDDDKKNKKSA"
BASE COUNT          996 a         1651 c         1573 g         1019 t
ORIGIN      
        1 ccgccacgca ggctcgcaaa gccgatgtcg ccagccttgc gggcgccggt gtgaccatcg
       61 cgcgcccgga cggagcgcac cgcgagatcg atgccgcggc ccgcagcagc cgccacgccg
      121 aacaacagcg cggtgccgga cggcgcgtct atttttttgc cgtgatgcat ctcgagaatc
      181 tcgatgtcga attcatcatc gagcgtcttg gcgacgcgct tgaccaatgc ggccaagaga
      241 ttgacgccga ggctcatgtt gccggatttg acgatgcggg cctggcttgc tgcagccgcg
      301 atgatcatct cgtccttcgc ggccaatccg gtggtgccga tgatgtggac tagaccatag
      361 gcggcgccct gttcggcgag cgtcatcgtg gcgacaggaa tcgtaaagtc gatcaaccca
      421 tccgcctggg cgagtaacgt cggggcatag gtgctcaccg caatgccgtt agggccgagg
      481 ccggccaatt cgccggcgtc gcgaccgatc tcggcagcgc ccggcgcttc gacggcgcct
      541 gtcagcacga cgccgtcggt ctctgcaatg gccttgatga cggtgcggcc cattcgcccc
      601 ccggcgccgg ccacgaccag ccgcatgtcg gacatggttt tcctccacta gaaggccgat
      661 atagcggcac ggcgtcggct tgaaaagcta gggctgaggg ccgtcatagc cttcgacaat
      721 cgcgacatcg gcgattgcat gaccgcgtcg cagcgttatg gcatgttgat attccggcga
      781 acgatagcag gcgagcgccg tttcgtagtc cgcaaactcg attaccacca agcgcggccg
      841 acaggtgccc tccacggcct catagcggcc cgcgcgaacc acataacgcg cgccgtattt
      901 gcggaacgcg atctggtttg ccgtcacata gttcttgtaa cgttccggat cggccacatc
      961 gacctgcacg aaccaatatc cttttgccat tggggcctcc tcaatttcct gcggcggccg
     1021 caatctcctt caagatggtg gcggcgacgg cgttcggatc cggcgcctcg aggatcggcc
     1081 gtcccacgac caagtagttg gcgccggccg caatcgcttg cgccggcgtc attacgcgct
     1141 tttggtcgtc cgtatcgacg ccgaccggcc ggataccagg ggtgaccaac gccatgcttg
     1201 gtcccacaat cggtcgcagc ttggcggctt ccgtggctga gcagacgaga ccgtcgacac
     1261 cgatgtcgtg ggcctgtgcg gcgcgctccg ctgcgagttc agccacggtg aagtcgtaac
     1321 cggctgccgc caaatcggca tcgtcgtacg atgtcaacac cgtgacggca agaattcgca
     1381 agccggtgtc gccgcgcgcc tccacggcag ccctcatggt ttgcggatag gcgtgcacgg
     1441 tcagaaacgt ggcgcccagc tgcgcgacgc tttcgacccc cttggccacg gtattgccga
     1501 tgtcgtgtag cttaagatcg agaaacacgc gtttgccgct gcgaatcaac gtttcagcga
     1561 acggcaggcc tcccacaaaa gccagctgat acccgatctt gtagaaagcg acggtatcgc
     1621 cgaggcggtc caccatcgct tcggctgccg caacggacgg cacatcaagg gctacgatca
     1681 gccggtcacg tgcttccagc atcgagcccc cctttccgcg tcatacgaag tgcctggcgg
     1741 attccacgag tttcccaagc accgaccgca gtttctctga gtggcgctcg tcgcgcaagt
     1801 tgtccaagtc gtcgaaagcg gtcgcagcct cgctaacggc aatctgctgc ggcagcacga
     1861 tcgcgccgca gccgagttcc agcacatggc gtagcgcgat cagcgaacga tagccgccaa
     1921 aggtcccgtt ggaagcagcg ccaagcgcga aaacacgctc tcgataggct gcgagcggtg
     1981 gttccggtgg ttcgcggaca cgggagatcc agtcgagcgc gttcttgagg agtggcgtaa
     2041 tcgaggcgtt gtattcgggg cttgtgatga aaataccgtg atggatgccg aacagtcttt
     2101 tcagtttctc ggcattcgcc gggataccct gttcagtttc gagatcgccg tgatagagcg
     2161 gcaggggata atcgaggagc gatatgcgtg tgacgtcgac gttcagcagc gcgagctcct
     2221 tggcggcgag ggccgcaagg cgcgcgttga aggacgcggt acgggtcgaa cccgcaaagg
     2281 tcagaatttt cggactacgc atcggaacat tctgcggcgc ttggcgggga aatactacgc
     2341 cttgcgatag atccacacgc gggcgggcgg aatattaagc caaatgcgct ccgaggcgag
     2401 ggcgcgggcg cccgaatagg aacgtggaat tggcggcacc accgcgtacg tgaattgaac
     2461 gaacggggcg ccgggtgcga gcaacgtaaa ggcatcggca agaagacgca gccgaagctt
     2521 gagcggtttg gtgaacaatg gcagacccga cactaccgcg gccgccggct ggcgcagcag
     2581 gctcgcgagc aggcgtttaa ttccgtaggc gtcgccctgc accaccgtgg cctcagggta
     2641 gcgcgtgcgc agcaaccggc aaaaagtcgg attaaactcc actaacacca atcgcgaggg
     2701 ctcgatacct tgctccacca acgccgccgt cacggccccg gttccgggtc cgagctcgat
     2761 caccggacct tccattttcg gatcgacgca tttcgccatc gcgcgcgcta acggctttcc
     2821 ggacggcatg acggcgccgg tcgcaagagg cttttccatc caacagcgga tgaaatgtac
     2881 ctcatcatcg agccgcagag ttctcttcgc gatactcagc gtggattgaa acgacatcta
     2941 gggaatcgat ttttgccgct gcccgccccg ggacccgtca cacagttgtc acgactatag
     3001 ggtagcggcg ccagggtcaa gaccattaag ccgatccggc gcgggtacca aaaaactcct
     3061 tgacccggcc gaagaagccg gcggactccg gattggtttc gtttgaggac aacctctgga
     3121 attcagagag aagctcccgt tgccgcttgg tgaggttctg cggcgtctcc accacgacct
     3181 gcacatacat atccccgagc tgctttgagc gtagcaccgg catgcctttg gcctgcaaac
     3241 ggaagcgccg ccccgattgc gtgccgtccg gaattttcac gcgagtcctg ccaccgtcga
     3301 tcgtcggtac ttcgaactct ccgccaagtg ccgcagtggt catagaaatc ggcgcccggc
     3361 agtgcagatc ggcaccgtcg cgttgaaaga agggatgagc tgagattgaa aggaaaatat
     3421 agagatctcc ggcagggccg ccgcgcaaac cggcctcacc ctcgccggaa agacggatac
     3481 gggtgccatc ttcgacaccc gccggaatat tgaccgagag ggcacgctcc cgcgtggtgc
     3541 ggccgaggcc cccgcacgtc ccacagggtg tatcgatcac ctggccgcgt ccgtggcagc
     3601 taggacaggt ccgctccaac gtgaagaacc cctgggcgtg ccggatctta ccctgccccc
     3661 cgcaggtcgc gcaaaccttg ggtttggtgc cggcctttgc gccgtttcca ccacaagttt
     3721 cgcacgtgac ggatgcgggt atgcggatct gagcgccttt gccgctgaag gcctcttcga
     3781 gggtcaattc catgttgtag cgcagatcgg cgccgcgctc gcggcccgaa ccgcggctgc
     3841 gccgaccgcc gcccatacca aaaaaatcat cgaaaatgtc agcgaaggaa gacgcgaatt
     3901 cagccccaaa gcccggccca ccgccgcttt gctcgaatgc cgcatgaccg aaacggtcgt
     3961 aggcggcacg cttatcgcca tccttgagga cctcataggc ctcgttgact tccttaaagc
     4021 gatgctcggc ctcatcgtcg cccggattgc gatccggatg gaatttcatg gcaagcttgc
     4081 ggtaagcggt cttcagatca gcatcgttgg catcgcgctg cacgccaagg acctcgtaat
     4141 aatcgcgctt gctcatgcga catcaccacg acgcaaggct aacgcccctt gccggatgcc
     4201 ggaagggcgc cgaacgagca ggcggtccgg gaaatggatc cgtgacatct ttcaggcgca
     4261 gcgcatacat ttataacccc cgggggtcct gggtgcgtga aggaccctgg attcccccgg
     4321 agaaatcagt tttaggccga ttttttgttc tttttgtcgt cgtccacttc ggtgaattct
     4381 gcgtcgacga catcatcctt cttggacccg cccggtccgc cagcttcggg gcccgcagcg
     4441 cccggcgatc cttccgtctg cttgtacatc gcttcgccaa gcttcatcga ggcctgagcc
     4501 agcgcattca tctttgccgt gatggcgtcg gtgtcgtcac cctttagggc ttccttgaga
     4561 tccgccaacg cggtctcgat ggcacgtcgc tcgccctcgc cgacctttgt gccgtgctcg
     4621 gaaagcgctt tctcagtcga atgcacgaga gcctcggcgt gattcttggc ttcgaccgcg
     4681 gccttgcgct tcttgtcttc ttcggcatgc gcctcggcgt ccttgaccat cttttggatc
     4741 tcggactcgg aaaggccgcc ggatgcctgg atgcggatct gctgctcctt gccggttgcc
     4801 ttgtccttgg cctggacatt gacaatgccg ttggcatcga tgtcgaacga cacctcgatc
     4861 tgcggcaccc cgcgcggagc tggcggaata ccgacaagat caaactgccc gagcaacttg
     4921 ttgtcggcgg ccatttcacg ctcgccttgg aacacgcgaa tcgtcacggc attctggttg
     4981 tcctcggcag tcgagaacac ctggctcttc ttggtcggaa tcgtagtatt gcgatcgatg
     5041 atgcgtgtga acacgccacc aagcgtctcg atgccaagcg acaacggcgt cacgtctagc
     5101 agcaatacgt ccttgacgtc gccctgtagc acgccggcct gaatggcagc gccgacggcg
     5161 accacttcat ccggattgac gcctttgtgg ggctcgcggc cgaagaactg cttcacgact
     5221 tcctggatct tcggcatgc
//
LOCUS       DATILV010000007         1714 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1023739, whole genome shotgun sequence.
ACCESSION   DATILV010000007 DATILV010000000
VERSION     DATILV010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1714
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1023739"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..660)
                     /locus_tag="VLJ17_00105"
     CDS             complement(<1..660)
                     /locus_tag="VLJ17_00105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017267458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxidase family protein"
                     /protein_id="HSV21409.1"
                     /translation="MSKSESENPVIPSPTPKRTRPRTNKDWWPDQLDLSILNAYSPVG
                     DPMGKDFNYAEEFKKLDVNALKKDIEQVMTTSQEWWPADYGHYGPLFIRMAWHAAGTY
                     RIADGRGGGGSGMQRFAPLNSWPDNANLDKARRLLWPIKQKYGNKISWADLIIFAGNC
                     AYESMGFKTFGFGFGREDRWEPDEIFWGPEDTWLGDARHAGDEKIQGPLGADHMGLIY
                     VN"
     gene            819..>1714
                     /locus_tag="VLJ17_00110"
     CDS             819..>1714
                     /locus_tag="VLJ17_00110"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HSV21410.1"
                     /translation="MNFSPHAFSLRQLQYIVAVADLLSFHRAADECHVSQPSLSLQIA
                     EVERVLAITIFERDPHRVALTAAGRDFVESARAVLHAADALAETARRCIDPFSGTLRI
                     GVIPTISPYWLPELTPALRKAYPHLKVIWLEDKTHILVHALQSGSIDAALLALEAEIG
                     DVEREVIAKDPFVLVAPAGNPLVAKNTPAKAAELRGATVMVLEDEHCFGKQALEFCFH
                     GQAQNHQFRGTSLATIISMVAGGVGVTLLPTLAVRSEVRINNLRVRRFADTEAARTIG
                     LVWRKKSSLAPALRKLATSMSQA"
BASE COUNT          339 a          495 c          479 g          401 t
ORIGIN      
        1 gttcacgtag atcaagccca tgtgatcagc gcccaaaggc ccctggatct tctcgtcgcc
       61 ggcgtggcgc gcgtctccaa gccaggtgtc ctcagggccc cagaagatct cgtcgggctc
      121 ccaacggtcc tcgcgcccaa agccgaagcc gaacgtcttg aagcccatcg actcataagc
      181 acagttgccg gcgaagataa tcaggtcggc ccaggagatc ttgttgccgt acttttgctt
      241 gatcggccac agtaaccggc gcgccttgtc gaggttcgcg ttgtccggcc aactgttgag
      301 gggagcaaag cgctgcatgc cgctgccgcc accgccccgg ccgtcggcaa tgcggtaagt
      361 gcccgcggca tgccacgcca tccggatgaa gagcggcccg tagtggccat agtcggccgg
      421 ccaccactcc tgcgatgtcg tcatcacctg ctcgatgtcc ttcttcaggg cattcacgtc
      481 aagtttcttg aactcctccg cgtagttgaa atccttgccc atcggatcgc cgacgggaga
      541 gtacgcgttg agaatggaga ggtccagctg atccggccac cagtccttgt tcgtcctggg
      601 ccgagtccgc ttgggagtcg gggaggggat tactgggttt tcgctttcgc ttttagacat
      661 atcgatcttt ctcctttctg gctgtgttgc ctgcaactaa tggcagatag cgaggcctat
      721 cttaccgctg attactgctt cgatacctag agatctaaca tctgcgaaca gggtttacaa
      781 atacatcttt taaatttttg tgataggctt tacctatcat gaatttcagt cctcacgcgt
      841 tctcccttcg tcagcttcaa tatattgtcg cggttgccga tttactgagc ttccatcgcg
      901 ccgccgatga gtgtcacgtg tctcaaccgt cgctgagctt acaaattgct gaggtcgagc
      961 gtgtattggc catcacaata tttgagcgcg atccccaccg tgttgctttg accgcggcgg
     1021 gtagggattt cgtcgagagt gcacgtgcgg tattgcacgc ggccgacgca ctcgctgaaa
     1081 ccgcccggcg ttgcatcgat ccgttctccg gcacgctacg catcggcgtc attccgacaa
     1141 tttcgcctta ttggttaccc gagttgacac cggccctgcg caaggcctat ccgcatctga
     1201 aggtgatctg gttagaagat aagactcata tacttgtgca cgcccttcaa tcaggttcga
     1261 tcgacgcggc tctgctggcg ctagaagcgg aaatcggcga tgtcgaacgc gaggtgatcg
     1321 caaaagatcc gtttgtcttg gtggcgccgg cgggaaatcc gctcgtggcg aaaaacacac
     1381 ccgccaaggc tgccgaattg cgcggagcaa ccgtgatggt actcgaagac gaacattgct
     1441 ttggcaagca ggctctggag ttttgctttc atggtcaagc gcaaaaccat cagttccgcg
     1501 gaacgagtct cgccaccatc atcagcatgg tcgcgggcgg cgtaggagtg acattgttgc
     1561 cgactctcgc ggtgcgcagc gaggtacgaa ttaataatct gcgtgtgcgc cgtttcgctg
     1621 acaccgaggc ggcgcggacc atcggtctag tgtggcgcaa gaaatcttca cttgcaccag
     1681 ccttgcgtaa gttagcgacc agcatgagtc aagc
//
LOCUS       DATILV010000008         2500 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1535378, whole genome shotgun sequence.
ACCESSION   DATILV010000008 DATILV010000000
VERSION     DATILV010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2500)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2500)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2500
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1535378"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..320
                     /locus_tag="VLJ17_00115"
     CDS             <1..320
                     /locus_tag="VLJ17_00115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HSV21411.1"
                     /translation="QGLQRSVLEGVRALKAVSADVVLMDLQYAPQVLASASYSTMEGI
                     IADVAKQERVGLFSRFALMRNSIHAGVAQSELVSFDGLHNTADGYDCIGRALARAIST
                     SAR"
     gene            complement(795..2282)
                     /locus_tag="VLJ17_00120"
     CDS             complement(795..2282)
                     /locus_tag="VLJ17_00120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008139227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HSV21412.1"
                     /translation="MARRFLKGHMQRRQFVTFLGTAAATALPLAARAQAPGRRPAQAA
                     AAGPVMNTLASYMAAARSRALPEEVVEPAKYHLIDTLAAMISGSELPPGQAAQRYIRE
                     HAGKGGTTVVASALTAAPLDAALANGVMAHADETDDSHNESRSHPGCAVVPAALALGE
                     EFVIDGVALLRAVTLGYDIGTRLVMAMGGAAFSYDSSLATHSIAGTFGATAAAACTAS
                     LDARQMRWALDYAAQQSSGIIAWRTDHIEKAFVFAGMPARNGVTAALVVKSGWNGVDD
                     IFSGPDNFFAAYAPKAQPDRLVEKLGERYEITQTDIKKWTVGSPIQGPLDAIEAIRKK
                     TPFEADSVKRVTVRLAPSVAAVVDNREIPDICLQHMVAVMLLDKTVSFHAAHDKSRMQ
                     DASVLRQRSKVNLVRDEELAKFLPSRETVVEVELNDGAKPSEHVSAVRGTPRNPMTKE
                     EVVEKASDLITPVLGRDASSRLIETVFGIETVTDIRNLRRLLQHG"
BASE COUNT          470 a          770 c          762 g          498 t
ORIGIN      
        1 accaagggct ccaaagaagc gttcttgagg gagtaagggc actcaaggcg gtgtccgccg
       61 acgtcgtgct gatggatctg caatatgcgc cacaggtgct cgcttcagcc agctactcga
      121 caatggaggg catcatcgcc gatgtcgcaa agcaggaacg ggtcgggctg ttctctcgtt
      181 ttgcactgat gcgaaactcc atccatgccg gagttgcgca aagcgagctt gtatcgtttg
      241 acggattgca caacaccgcc gatggctatg attgcattgg acgagccctt gccagggcta
      301 tctcgacgag cgcgcgttga gaggcccggg tcatgagttt ggccgcgggc cggaacagtg
      361 gcgccgaacg cgcagatgcc cgcgaacgtc agcgagatca attttcctcg acgatcaccg
      421 cgacacaccg gtcacaaccg gtgacagcaa ttcgcgctga tgctgtcagg aggcgcgcgc
      481 atgcaccatt atgccagcca acttattgac ctattgctgg tgcttgtcgc cgcgtggatg
      541 gtgctagccg tcatctttgt tatctacgca tatttcgcac gtcttaagta cccggtaagc
      601 gaatcggtct ttgggcgtgt ggtcgtcttt tccttcttca tcataaccac gtcgatttgg
      661 ctcccgatta ttgtgggcgc cctggtccta tcgctggccg gtcatttgtg gtcccgcttc
      721 aggacaaaac cacgcaagta gccaatgctt gcgagtacac gcagaacgtg ccgatgccag
      781 tcaccgaccc aaagtcaccc gtgctgaagc aatcggcgca ggttgcgaat atcggtcacg
      841 gtttcgattc cgaacacggt ttcgatcaag cggctcgagg catcgcgccc gagcaccggc
      901 gtgatcagat cgctcgcttt ttcgacgact tcctctttcg tcatcgggtt gcgcggcgtc
      961 ccgcgcacgg ccgagacatg ctccgacggt ttggctccgt cattcaattc gacctcgacc
     1021 acggtttcgc gtgaaggcaa gaactttgcc agttcctcgt cgcgcaccag attgaccttg
     1081 ctacgctggc gcaagacaga agcgtcctgc atgcgcgact tgtcgtgcgc ggcatgaaac
     1141 gacaccgtct tgtcgagcag catcacggcc accatgtgct gcaggcagat gtcgggaatc
     1201 tcgcggttgt cgaccaccgc cgcaaccgac ggcgcaaggc gaaccgtcac gcgcttgaca
     1261 gaatcggctt cgaaaggcgt tttcttgcgg atcgcctcga tcgcatcgag cggcccctgg
     1321 attggcgaac cgaccgtcca cttcttgatg tcggtttggg tgatttcata gcgctcgccg
     1381 agtttttcga cgagccgatc gggctgcgcc ttcggcgcat aggcggcgaa gaagttgtcg
     1441 ggaccggaga aaatgtcgtc gacgccgttc catcctgatt tgacgacgag cgccgcggta
     1501 accccattac gggccggcat gccggcaaac acgaacgcct tttcgatgtg gtcggtgcgc
     1561 caggcgatga tgccggagga ttgctgcgcg gcataatcga gcgcccagcg catctggcgc
     1621 gcatcgagcg aggcggtgca agccgccgcc gccgtggcac cgaacgtgcc ggcaatgctg
     1681 tgggtcgcaa gactgctgtc gtaactgaag gccgcacctc ccatggccat gaccaggcgc
     1741 gtgccgatgt cgtagccgag cgtaacggca cgaagcagag ccaccccgtc aatgacgaat
     1801 tcctcgccga gcgcaagcgc ggccggcacg accgcgcagc ccggatggga gcgcgattca
     1861 ttgtgcgagt cgtcggtctc atcggcatgc gccatgacgc cgttggccag cgcggcgtcg
     1921 agcggtgccg cggtcagcgc cgaggccacg accgtcgttc ctcccttgcc ggcgtgttcg
     1981 cggatgtagc gctgagccgc ctgacccggc ggcagttcgg agccggaaat catcgcggcc
     2041 agcgtatcga tcaggtggta tttcgccggc tcgacgacct cttccggcag cgcgcgtgat
     2101 cgtgccgccg ccatgtagct ggcaagcgta ttcatgaccg gccctgcagc tgctgcctgc
     2161 gccgggcggc gcccgggcgc ctgcgcccgc gccgccagag gcaaagccgt cgctgccgcg
     2221 gtgccgagaa acgtgacgaa ctggcgccgc tgcatgtgcc ccttcaagaa ccgacgtgcc
     2281 atcggaaagc cttcagcaca ctagtacccg ctttccgaag ttcgcaatcc gcctccgcat
     2341 tttcccaaac gaacttcgga aagcaaaggg tactagcaag cctttgaatg gtagtgccgc
     2401 ttttcgagtt gaagttcctg taggagtttg ccgcggatga tgcaggaact tcaaatcggc
     2461 ggcactaggc gccgccgcgg agcgatcaac gacatggtta
//
LOCUS       DATILV010000009         6530 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3069596, whole genome shotgun sequence.
ACCESSION   DATILV010000009 DATILV010000000
VERSION     DATILV010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6530
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3069596"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(153..1154)
                     /locus_tag="VLJ17_00125"
     CDS             complement(153..1154)
                     /locus_tag="VLJ17_00125"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HSV21413.1"
                     /translation="MAGSPHILVVGFGSAGRRHAQNLFRRGATISVVDTRSDRLSAEG
                     VHVQAAFAEIDAALSHGPYDGAVVATPTAFHVEQTERLLAGGCRVLLEKPVAVDLNSA
                     KRLAAAEADMGLPILLGYTWRWWPPLKEFRRRLRQGAIGRPLRAEFVMASHLEDWHPW
                     EPLKDFFMGRADLGGGALLDESHWIDQMVWMLGEPVEICAAVEKVSRLPIDSDDHVEL
                     QAYYPDGLRVRVHLDLYTRPTERSIVIVGDKGTLKWSFERNVIAEHHSDDRGWQETLF
                     AGERNDMFDALAGEFLDVRRGATSPSCTVADGLAVLRIVDAARMSQRRDGRKTAPAC"
     gene            complement(1162..2676)
                     /locus_tag="VLJ17_00130"
     CDS             complement(1162..2676)
                     /locus_tag="VLJ17_00130"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HSV21414.1"
                     /translation="MSGIADLAKIADGLAFGIPGGGASLEVADAVERQGGRFHTTRFE
                     GSAALMAGAVGRLRGSPGVAVSIKGPGLANLAAGLATAWLEDLPVVAIAEAFGKSEVA
                     ARMHKRLDHSSLVGAITKGRCGIDDSAGVARLASLAAAERPGPVLIELSDTASYFPPS
                     AALAPRDTDAVLRAIEGAQRPVVVAGGLAARRGLSDALNSLSVPVFSTAGAKGVVDET
                     RPYAAGVYTGVGRELAPEHAIIADADLVVGIGLRTHEVLAAGLPVPFINVDDLDAAPG
                     FSLSAVAPIDAAPRILAGLRESANWGRSEIAGSRDRMRTALLDGPFLPAQVFAALAEQ
                     LPRCSMVLDTGFFCTIGEHIWEVSAPELYLSSGQGRSMGAALPMAVAAALYRPEVPTV
                     LAIGDGGIGMFMTELTLAVTERLPLLVLFLSDGTYASVRDRAVWRGLAQRPLISPDLN
                     WIEIASGIGFAADRVATAADVSRFVQRWNGAGPAFLDVRFDPEPYRTMTTKLRA"
     gene            complement(2731..3693)
                     /locus_tag="VLJ17_00135"
     CDS             complement(2731..3693)
                     /locus_tag="VLJ17_00135"
                     /inference="COORDINATES: protein motif:HMM:NF014841.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSV21415.1"
                     /translation="MASDSPVLVFVGPEEGWAAVSNAISSAAQLVHVESTQQALAAAL
                     TNADGLIDAAIRIPLTDEMVRAAPRLKVVSCASTGADHVARAEIDRRGIVVRTLRDSP
                     DVIRGLTPAAELSWALVMACARKLPAAIAHVRAGGWAREQFPGVLLRGRQLGLIGCGR
                     IGGWMARYAEAFGMRVVGYDPHQADWPTNIVRISIEQLMKTSDVVSVHVPLNEETKGL
                     VSAALFACVKPGAIFINTSRGSIADEAALLAGLNSGRIGAAGLDVLDGEPAISNHPLL
                     AYARDHDNLLITPHCGGNSPDAIAIVSAHAARVAFEEIKRQGRS"
     gene            complement(4898..6169)
                     /locus_tag="VLJ17_00140"
     CDS             complement(4898..6169)
                     /locus_tag="VLJ17_00140"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HSV21416.1"
                     /translation="MTTLAETSAPVEAGVHVARYLLIATLIAMLVSTSLTIGLEFAVY
                     AVFLYFRSLRQRLWFVLRQPPALALTIFLAIVLIGTLHGVVSWPPRVVQIAAWRKALL
                     FFFAAAVFDDQESKRELTGIYFAVCLIAWVLSLVTFVFQIHIYRDLSDGIVIHNYATQ
                     SFAFSIAAGIAAVALVNPRQFADDPLLKHRLVAAIATGLFILNIAFVSRGRSGYLALV
                     VMAGTLAVMLGGQSRSTKMLSGVGVLAIMFAILAASGQVRDRVAQAIDEMRSIEYSPQ
                     PTSAGIRVVMWKNTLRMIGDHPVLGVGTGSFHDAYQKYVEGGAGWQAQEATDPHNQYL
                     KIWAEQGAIGLLALLAFIVAALATKGIAPYRELGIAILLAMSASSFFNSHFSTFFEGR
                     MLFFWVGALVATPVASKPLRVPRAKGVETSG"
BASE COUNT         1428 a         2057 c         1879 g         1166 t
ORIGIN      
        1 gaacactagg caagaaggct ggattgcgca aatccccagg atcagccggc ccacagaaag
       61 gccccttgcc ccgaacatcc ggcggtacgc ctccccgcga ggctgtgtcc ggttgaccgc
      121 cggccccttc ggtgcacggc aatgcggcaa ggtcagcatg ccggggcggt ctttcggccg
      181 tcccgccgtt ggctcatgcg tgccgcatca acaatccgca gcacagcaag gccgtccgca
      241 accgtgcagg atggcgacgt agcgcccctg cggacatcga gaaactcgcc tgccagtgcg
      301 tcgaacatgt cgttgcgctc gccggcaaac agagtctcct gccaacctcg atcatcggaa
      361 tgatgttcgg cgatgacatt gcgttcgaac gaccacttga gcgttccctt gtccccgacg
      421 attacgatcg agcgctcggt tggccgggtg tagaggtcga gatggacccg tacgcgcaat
      481 ccatcgggat aataggcctg cagttcaacg tgatcatcac tgtcgatcgg cagtcggctc
      541 accttttcga cagccgcaca aatctccacc ggctcaccaa gcatccacac catctggtcg
      601 atccagtgac tctcgtctag cagagcgccg ccgccgagat cggcgcgccc catgaaaaaa
      661 tccttgagcg gttcccacgg gtgccaatcc tccagatgcg aggccatgac gaattccgcg
      721 cgcaatggac ggccgatcgc gccttggcgc aaacgtctgc gaaattcctt caaagggggc
      781 caccatcgcc acgtgtaccc cagcaggata ggcaatccca tatcggcctc ggcagcagca
      841 agacgtttcg ctgagttgag atcgaccgcg acgggctttt cgagcagcac gcgacagccg
      901 ccggcgagta accgctccgt ctgctcgacg tgaaacgcgg ttggtgttgc cacgactgcg
      961 ccatcatagg gaccatgcga cagggcggca tcgatctcgg caaacgctgc ttgcacgtgc
     1021 accccttcag cgctcaaacg gtcgcttctc gtatcaacga cgctgatggt ggcgccgcgg
     1081 cgaaacaaat tttgcgcatg acgtcgcccg gcgctaccga aaccgacgac gagaatatgc
     1141 ggactcccgg ccataccagc ctcaggcgcg gagcttggtg gtcatggttc ggtatggctc
     1201 gggatcgaag cggacgtcga gaaatgcggg cccggcgccg ttccatcgct gcacaaagcg
     1261 cgagacgtca gcagcggtcg cgacgcggtc cgcagcaaat ccgatcccag atgcaatttc
     1321 gatccagttc agatcaggtg agatcaacgg acgttgcgca agccccctcc atacggcacg
     1381 atcgcggacg gacgcgtagg tgccgtccga aagaaatagt accaacagcg ggagccgttc
     1441 cgttaccgcg agggtcaatt cggtcataaa cattccgatt ccgccatcgc cgatcgcaag
     1501 gactgttggt acctctggtc ggtacagggc cgccgcgacg gccatcggaa gcgcggcccc
     1561 catagaccgg ccctggcccg aagaaagata aagttcgggc gcactgacct cccagatgtg
     1621 ctcaccgatg gtgcagaaaa accccgtatc aagcaccata ctgcatcgag gcagttgctc
     1681 ggcaagcgcc gcaaagacct gagctggaag gaaagggccg tcaagcaatg cagtccgcat
     1741 gcgatcgcgc gatccggcaa tctcgctgcg cccccagttt gcgctttccc tgagccccgc
     1801 caaaatgcgc ggagcggcgt cgatgggcgc cacagcggac aaagaaaatc ccggcgccgc
     1861 gtcgagatca tcgacgttaa tgaatggcac gggcaaccca gccgccaaaa cttcgtgggt
     1921 acgcagtccg attccgacga ccagatcggc atccgcgatg atggcgtgtt caggcgcgag
     1981 ctcacgcccg acgccggtat agacgccggc cgcatatggc cgcgtctcgt cgaccacgcc
     2041 tttagcgccc gctgtcgaga ataccggtac cgacaggctg ttgagggcat cgcttagacc
     2101 ccgccgggcc gcaagtccgc ctgcgacgac aaccggccgc tgggcacctt cgatcgcgcg
     2161 cagaaccgcg tctgtatcgc gaggcgctag ggccgccgaa ggaggaaaat atgaggcggt
     2221 atctgaaagc tcgatcaaga cgggacccgg ccgctccgcc gcggcaagcg atgcgagcct
     2281 tgcgacgcct gccgagtcat cgatcccgca tctgcccttt gtgatcgccc cgacgagcga
     2341 agaatgatcg agccgcttgt gcatccgcgc ggccacctcc gatttgccga aggcctccgc
     2401 aatcgccacc accggcaggt cctcaagcca cgcggtcgcg agccccgcgg caagattggc
     2461 aaggcctggc ccctttatcg aaacggctac acccggactg ccgcgcagtc gcccgaccgc
     2521 gccagccatc agggcggcag aaccttcgaa ccgagttgtg tggaagcgcc ctccctgccg
     2581 ctcgacggca tccgcaacct cgaggctagc ccctccccca gggatcccaa aggccaatcc
     2641 atcggcaatt ttggcaagat cggcaatgcc actcaccgtg atttttcctt ccgcggatat
     2701 cttgtccgca cttcgcattc tctgcgtcgc ttacgatctt ccttgccgct tgatttcctc
     2761 gaacgcaact cgcgccgcgt gcgctgacac aatcgcaatt gcatcgggac tgttgccgcc
     2821 gcaatgcggc gtaattaaca gattgtcgtg atcgcgggcg taggcgagca acggatgatt
     2881 cgaaatcgcc ggctcaccgt cgagcacatc gagccccgcg gctccaatcc gaccagaatt
     2941 gaggccagcc aacagcgcgg cctcgtccgc gatcgaaccg cgtgatgtat tgataaagat
     3001 tgccccaggt ttgacgcacg cgaacagtgc agccgagacg agccccttgg tttcctcgtt
     3061 aagcggcacg tgcacggaca cgacgtcgct cgttttcatc aattgttcga tcgagatgcg
     3121 gacgatattt gttggccaat cagcttggtg cggatcatac ccgacgacac gcattccgaa
     3181 cgcttccgca taacgggcca tccatccgcc gatgcggccg cagccgatta ggccgagctg
     3241 acgtccccta agcaatacgc caggaaattg ttcgcgggcc cagccgcctg cccgcacgtg
     3301 agcaatggct gcaggtagtt tgcgggcgca cgccatcacc aacgcccacg aaagctcagc
     3361 ggccggcgta agccctcgga tgacatcagg ggaatcgcgc aacgtacgga caacaatacc
     3421 ccgccgatcg atctccgcgc gcgccacatg gtcggcaccg gtggatgcac agctcacgac
     3481 cttcagtcga ggcgcggctc ggaccatttc atcggtcagc ggaatgcgga tcgcggcatc
     3541 gatcaacccg tcggcattgg tcaacgctgc cgcaagtgct tgttgcgtcg attcaacgtg
     3601 gacgagttgc gccgctgatg aaatggcatt gctgaccgct gcccaacctt cttcgggtcc
     3661 aacaaatacg agaacgggag agtcggatgc catggcagaa gttgacagac ctttatatcg
     3721 ggtacgagtc aatcgacagt ccaaaggcgt tggtaacctc gttcggccgc aagtcgaaat
     3781 cgccgacgga ggaagcgggt ctcaatactt gggctacaat catttgaacc gtgacaatcg
     3841 tgcctgatgc cgcgacccgt cacatggctt cttcggccga ttgacgaagc gcagaaagta
     3901 ctgcgcaagg cgaagtcgtt tgggctcgga tttagcccaa acgcattagc gtctactgcc
     3961 gggcggaacg acaagcgccc tgataccaat tgtacccggg agggcaccca cggccatatt
     4021 gatagccggg gtcaaatgtt ctggcggaca gacatcggcc gcccgccgga tcgaaattgt
     4081 aaccgggcgg acaggctccg cgaccatatc cgccgtagta acggggccca gggtcataaa
     4141 catcggccgg taggcattca ccgttcgccc aatcgaaatt gtaaccgcgc gggcatccct
     4201 gcgccaacac aaatggctcg gacgtcatgt gctccgattc acggcggtcg tggtcggcga
     4261 gctgctctac tcggacgcga gatggcgcca agcctgcagt acgcgcggca gcggaggccc
     4321 aaacagcaat ttcactggag gcggagcggg tatcggcggt ggctatcgtg gtggcaccga
     4381 gaacggccag cgcgacgagg gcgaacctcc cgccggaaac aaaaggcagc atgaccagca
     4441 tcccccaaat atgttttttt catcgtagta agcaatacca agaaagaagg ttccgtacca
     4501 gcttcaccgg ttgcgcaatg aggccctact ggtatttcac cgcgtgcgac cgagggggaa
     4561 gtcgtggctg ataatagcct gccgcagcat cagaattgct gggccttcgt gcgataaagg
     4621 cagcacgatc ggccgaaagg ctgcgtgtca cccgacgatg gcacgatgag cgcgcgacgt
     4681 cgacaaagcc gaacatgcca agccatgatt gcagagctct gatgctcggc aggtaggtga
     4741 cgttcgcgga cagatgataa ctctgggacg cagccttggt tgacggaaac cagatctcaa
     4801 cgcaattgtc attccgcgtc cgcgggcgtc gcgcgcgaga tccactcgac cctcatttta
     4861 gatcgcaagg accagccgcg gcaatggagc acggtgctta tccgctcgtc tcaacgccct
     4921 ttgcgcgggg aactcttaac ggcttacttg ctacaggggt tgccaccagg gcgccaaccc
     4981 aaaaaaataa catgcgaccc tcgaagaacg ttgaaaaatg cgagttgaag aagcttgacg
     5041 ccgacatggc gagcaggatt gcaatcccga gttcgcgata aggtgcgatg cctttggtgg
     5101 ccagcgcggc cacgatgaac gcaagaagcg ccaagaggcc gatcgcgccc tgctcggccc
     5161 agatcttcag gtattgattg tgcggatcgg tggcttcctg cgcctgccat ccggcgccgc
     5221 cttcaacata tttttggtag gcatcgtgga agctgccggt gccgacgccg agcaccggat
     5281 gatccccgat cattcgcaag gtattcttcc acatgaccac ccgtatgcca gccgaggtag
     5341 gctgaggcga gtactcaatg ctccgcatct cgtcaattgc ttgcgcaacc cggtccctca
     5401 cctgcccgct tgccgcaagg atcgcaaaca tgatggcgag aacgccaaca cccgacagca
     5461 tcttcgtcga tcttgattgt ccgcccagca tcacggcaag cgtcccagcc atcacgacaa
     5521 gcgctagata tccgcttcgt ccgcgcgaca cgaatgcaat attaaggata aagagaccgg
     5581 tggcgattgc cgcaaccagc cggtgcttca atagcggatc atccgcgaat tgccttggat
     5641 tcaccagcgc gaccgccgcg atgccggcgg caatcgaaaa ggcgaagctt tgcgttgcat
     5701 aattgtgaat gacgatgccg tcactgaggt ctctgtagat atgtatttgg aaaacaaatg
     5761 ttactaacga aaggacccac gcgatcaggc agacagcgaa ataaatcccc gtcagttctc
     5821 gcttggattc ttgatcgtcg aacactgcag ccgcaaagaa gaacagcagc gccttccgcc
     5881 aggccgcgat ctgtaccacc cgcggcggcc atgacaccac cccatgcaac gtaccaatca
     5941 gtacgattgc caggaaaatg gtgagcgcga gcgccggtgg ctggcgcaaa acaaaccaga
     6001 gcctttggcg taacgaccga aaatagagaa atacggcata gacggcaaat tcaagaccga
     6061 tcgtcagcga ggtcgagaca agcatggcga tcagtgtcgc gatcaagagg tagcgggcga
     6121 cgtgcacacc cgcctcaacg ggcgcgcttg tctcagcgag tgtcgtcata tgctgcttgc
     6181 ttccacctgg gatgctgccc atgtacccaa gcctgtgttg acttcagcgt ctaacatacc
     6241 ggcgcaggct cccgcctcct tgaattcttt cgtaagccta tgccgagccg gctgcccatg
     6301 ggggcggtgc cccgatcatg gagaaacggc aggaagtcct gcccgtgcgc ggccccgccg
     6361 ccgtcgaggt gcctcttgta atgcaccccg atcccgtcgt gacgcacatg ccaccagggc
     6421 tttaataccg cctccgcaat tccagacgct tgccattgcc gctcgcaaag ttgatttcgg
     6481 cggacatttg aggacgcgac tacacctgtc aaggctggcg tcgtcgataa
//
LOCUS       DATILV010000010         4018 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_258504, whole genome shotgun sequence.
ACCESSION   DATILV010000010 DATILV010000000
VERSION     DATILV010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4018
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_258504"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..813)
                     /locus_tag="VLJ17_00145"
     CDS             complement(<1..813)
                     /locus_tag="VLJ17_00145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0042398 - cellular modified amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-cysteine ligase family protein"
                     /protein_id="HSV21417.1"
                     /translation="MARDQVDVTPIESRDELVAWFAAGEKRRDQFRVGTEHEKFAFTL
                     ARNEPVHYQSPRSIRALLEGMQLLLGWDPIMEGPNIIGLSDVTGGGAISLEPGGQFEL
                     SGAPVKTVHRTCSELMAHLAQLREVAEPLGIGFLGIGMTPNWSRSQMPVMPKGRYRIM
                     TSYMPKVGRLGLDMMYRTCTVQANLDFSSEADMVKKLRVSLALQPVATALFANSPFTE
                     GKPNGFLSFRSEIWRDTDPDRSGMLPWAFEPGMGYERWTDYALDVPMYFVKRD"
     gene            1113..1463
                     /locus_tag="VLJ17_00150"
     CDS             1113..1463
                     /locus_tag="VLJ17_00150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21418.1"
                     /translation="MPIKLGATALLAATLGGCATSLDVDPFVAPAKFQFLRCEDIAKR
                     LVAAQTREQELRALMDRAETGVGGPAVNLLVYQPDFQTTQSELRQLREAAIEKHCPDE
                     TRKVAPKVDTGKPR"
     gene            complement(1516..2148)
                     /gene="metW"
                     /locus_tag="VLJ17_00155"
     CDS             complement(1516..2148)
                     /gene="metW"
                     /locus_tag="VLJ17_00155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008962109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine biosynthesis protein MetW"
                     /protein_id="HSV21419.1"
                     /translation="MAEAARGPGNARVDHLLVAEMIEPRSRVLDVGCGDGELLKLLES
                     RGVDGRGIELSREGVNECVAKGLAVIQGDADADLAEYPNDAFDYVVLSQTLQATRHPR
                     VVLEHMLRIGRRAVVSFPNFGHWRIRLLLMFGGRMPQTDNLPDTWYDTPNIHFCTIKD
                     FRDLCIMVGVKMERALALDAWGRPLRLNAPWWFWNLFGEQAVFLLSRRGD"
     gene            complement(2181..3371)
                     /locus_tag="VLJ17_00160"
     CDS             complement(2181..3371)
                     /locus_tag="VLJ17_00160"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HSV21420.1"
                     /translation="MPELKAVAGRTVVDREREADHPHSPVAAFGIDQPLRLDAGVELS
                     PFQVAYQSYGALNADRSNAVLICHALTGDQHVFNRHPVTGKSGWWETMVGPAKPIDTN
                     RYYVICPNVLGACMGTSGPASINPSTGAPWGLDFPVITIRDMVRAQAMLLDRLGINTL
                     LAVAGGSMGGMQVLQWAASFPERVFAALPIACATRHSAQNIAFHEVGRQAVMADPEWR
                     DGRYFAEGVSPRRGLAVARMGAHITYLSDAALHRKFGRRFQDRNNPTFSFDADFEVES
                     YLRHQGSSFVERFDANSYLYLTRAMDYFDLAADCDGVLANAFKDSKTRFCVISFTSDW
                     LFPTSESRAIVHALNAAGARVSFAEITTDKGHDAFLLDEPELFQIVAGFLDSAAAARG
                     IAKV"
     gene            3574..>4018
                     /locus_tag="VLJ17_00165"
     CDS             3574..>4018
                     /locus_tag="VLJ17_00165"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0046417 - chorismate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HSV21421.1"
                     /translation="MSPTDTPLADLRREIDCIDEAMHRLLMERGEIISRLIKTKRTTE
                     AGSAFRPAREADMMRRLVERHSGILPLDTAESIWRVIIATFTYVQAPFRIHVDFSAGE
                     AAMRDCERFHFGFTVPLAGHLGPAGVVAAVAAATGDLGLVPVQGSP"
BASE COUNT          784 a         1244 c         1260 g          730 t
ORIGIN      
        1 gtctcgtttg acgaagtaca tcggcacgtc cagcgcgtag tcggtccaac gctcgtatcc
       61 cataccgggc tcgaacgccc agggcagcat gccggagcgg tcaggatcgg tgtcgcgcca
      121 aatctcagag cggaacgaca gaaatccgtt tggcttgcct tcggtgaacg gcgaattggc
      181 gaacagggcg gtagcgaccg gctgcagggc aagcgacacc cgcagctttt tcaccatgtc
      241 ggcttccgac gaaaaatcga gattggcctg caccgtgcat gtccgataca tcatatcgag
      301 gccgagcctc ccgaccttgg gcatatagga ggtcatgatc cggtaacggc cctttggcat
      361 caccggcatc tggctgcggc tccaattggg cgtcatgccg atgcccagga agccgatacc
      421 gagcggttcc gcgacctcgc gcaattgcgc cagatgcgcc atcagctcgg agcaggtccg
      481 gtgaacagtc ttgacgggag ccccggacag ctcgaattgt ccgccgggct ccagcgaaat
      541 ggcgccgcca ccagtcacgt cggacaggcc gatgatattc ggcccttcca tgatcgggtc
      601 ccaaccgagc aataactgca tcccctctag cagcgcccgg atgctgcgcg ggctctgata
      661 gtgtacgggc tcgttccgcg cgagcgtgaa tgcgaatttt tcgtgttcgg tgccgactcg
      721 aaactgatcg cgccgctttt cgccggcggc gaaccatgcg acgagttcgt cccgcgattc
      781 gatcggcgtc acatcaacct ggtcgcgcgc cataaatcat aactgcccca acaaattagg
      841 gcgcgacctt acacgggctt cgcaaaagcg caaatgcccg aaggttacag cgcagggctt
      901 ccgcgggcat cttcccccgt accccgatca gccgaatttg cttaggacgc aaaggatcgt
      961 taagtgtgca tgactcgggt gggaattatg actgtaacgg gacattagag cgtgttttga
     1021 tcaagttgac gcagcttagg gtgggaaagg gtttcttcgc gccgctccga cacggctacg
     1081 gcttgccggg cagcacagga aacgggcgac cgatgccgat caagcttggc gcgacagcgc
     1141 tgttggcggc gactctcggg ggctgtgcga cctcgctcga cgtcgacccg ttcgtggcac
     1201 cggcaaaatt ccaatttctt cgctgcgagg acatcgcgaa gcggttggtg gctgcgcaga
     1261 ctcgggagca agagttacgc gccttgatgg accgcgccga aacgggagtc ggcgggcccg
     1321 ccgtgaactt actcgtgtat caaccggatt tccaaaccac gcaatccgaa ttgcggcagc
     1381 ttcgcgaggc cgcaatcgaa aagcattgcc ctgatgagac ccgcaaggtc gccccgaagg
     1441 tggataccgg caagccgcgt taggttagta ggcggcaata atccccgcga ccggacgcgg
     1501 cgccggttct gccgttcagt ctccgcgtcg gcttagcagg aacaccgcct gctcgccgaa
     1561 caggttccag aaccaccagg gcgcattaag gcgaagcggc cgcccccagg cgtcgagggc
     1621 gagcgcgcgt tccattttga ccccaaccat gatgcacaga tcgcgaaaat ccttgatggt
     1681 gcagaagtgg atgttggggg tgtcgtacca tgtgtccgga agattgtcgg tctgcggcat
     1741 tcggccgcca aacatcagca gcagccggat tcgccagtgg ccgaaattgg ggaacgacac
     1801 gactgcacgt cggccgatcc gcagcatgtg ctccagtacg acacggggat ggcgagtggc
     1861 ctgcaaggtc tgcgatagca ccacgtagtc gaaggcgtcg ttcggatact ccgcaaggtc
     1921 ggcgtcggcg tcgccctgga tcacggcgag gcccttggcg acgcactcgt tgacgccttc
     1981 gcgcgatagc tcgatgccgc gtccgtcgac gccacggctc tccaacagtt tcagcagttc
     2041 gccgtcaccg caaccgacat cgagtacgcg cgagcgcggc tcaatcatct cggccaccag
     2101 gagatggtcg acgcgggcgt tgccgggccc gcgcgcggct tccgccatgg tgagatcacg
     2161 ccgcgttcgc gacagcatgc ctataccttc gcgatgccgc gcgccgcggc ggcggaatcc
     2221 agaaaccctg cgacgatctg gaacagttcc ggctcgtcga gtaggaaggc gtcgtggccc
     2281 ttgtcggtgg tgatctcggc gaacgagacg cgcgctcctg cggcgttgag cgcgtgcacg
     2341 atcgcacgtg attccgaagt cggaaacagc cagtcgctgg tgaacgagat cacgcagaac
     2401 cgtgttttgc tatccttgaa ggcattggcg agcacgccgt cgcaatcggc cgcaagatcg
     2461 aagtagtcca tcgcgcgggt gagatagaga tagctgttgg cgtcgaaacg ttccacgaag
     2521 gacgagccct ggtggcgcag gtagctctcg acctcgaaat cggcatcgaa ggagaaggtc
     2581 ggattgttac gatcctgaaa cctcctaccg aatttgcgat ggagtgcagc gtccgacagg
     2641 taggtgatat gcgcacccat gcgggcgacc gcaagccctc gccgcgggct cacgccttcg
     2701 gcaaaatagc gcccgtcgcg ccattcggga tccgccatca cggcttggcg gccgacctcg
     2761 tggaacgcga tgttttgcgc cgaatgccgg gtcgcgcaag cgatcggcag cgccgcgaag
     2821 acgcgctcag gaaagctcgc cgcccattgc agcacctgca taccgcccat cgatccgccc
     2881 gcgaccgcca acagggtatt gatgccgagg cgatcgagca gcatcgcttg ggcccgcacc
     2941 atgtcgcgaa tcgtgatgac gggaaaatcg agaccccacg gggcacctgt gctcggattg
     3001 atcgaggccg gacctgaggt tcccatgcag gcgccgagca cattgggaca gatcacgtag
     3061 taacggttgg tatcgattgg cttagcgggc ccgaccattg tctcccacca gccggatttg
     3121 ccggtgacgg gatggcggtt gaagacatgc tgatcgccgg tgagcgcatg gcagatgagc
     3181 accgcattgc tgcggtcggc gttaagtgcg ccgtagctct ggtaggcgac ctggaacggg
     3241 ctgagctcga ccccggcatc gagccgaagc ggctggtcta ttccgaaagc cgcaacggga
     3301 gagtgcggat gatctgcttc ccgctcccga tccaccactg tgcggcccgc aacggctttt
     3361 aactccggca tctggctttc cggtcctccc gaacgcagct gattcggcag cggaactcgc
     3421 tgcaaagact aagatatctg gccggctgca aataagccgc caagtgtcgc ggtccaagtc
     3481 ctgctgtcaa tgttttcttt gcttttgggg cgtccacgcc ctatcaatgt ggccgccgtg
     3541 agctcgggcc aaatgcccat aaagattgaa caaatgagcc cgaccgacac cccgctcgct
     3601 gatctgcgcc gcgagatcga ctgcatcgac gaggccatgc atcgcctgct catggagcgc
     3661 ggcgagatca tcagccgact catcaagaca aagcgcacca ccgaagcggg ctcggccttc
     3721 cggccggcac gcgaggcaga catgatgcgg cgcctggtcg agcgccacag cgggattttg
     3781 ccgctcgata ccgccgaaag catctggcgg gtgattattg ccaccttcac ctacgtacag
     3841 gcgccgtttc gtatccatgt ggatttctcc gccggggaag ccgcgatgcg cgactgcgag
     3901 cggttccatt tcggcttcac ggtgccgctg gccggccatt tgggacccgc cggcgtagtg
     3961 gccgccgtcg cggccgcgac cggcgatctc ggcttggtgc cggtgcaggg gagcccca
//
LOCUS       DATILV010000011         5904 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1536481, whole genome shotgun sequence.
ACCESSION   DATILV010000011 DATILV010000000
VERSION     DATILV010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5904)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5904)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5904
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1536481"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            122..1627
                     /locus_tag="VLJ17_00170"
     CDS             122..1627
                     /locus_tag="VLJ17_00170"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HSV21422.1"
                     /translation="MALESTARRQVVNPTPSAPPYRAAPHNIELEQALLGAILVNNEA
                     FYRVSDFLEPRHFFEPVHQKLYEITSSLVRVGKTATPITLKTFLPPDLDIAGLTASQY
                     LARLAAEATTVINASDYGRTIYDLAIRRSLIVIGEEMVNAAYDAAVDERPRDQIEQAE
                     RNLYELAETGRYDGGFQRFAQALTTAVEMAAHAYQRDGKLSGLASGLKDLDRMMGGLQ
                     KSDLLILAGRPGMGKTALATNLAYNIAKAWEGGVRADGQMESTNGGIVGFFSLEMSAE
                     QLATRILSEQTEIASYRIRRGEITPSDFDRIAETAREMERIPLYIDETGGLSIAQLAA
                     RARRLKRQRGLDLLVIDYIQLLQGSSRRALEGRVQEVTEITTSLKALAKELGIPILAL
                     SQLSRAVENRDDKRPQLSDLRESGSIEQDADVVMFVFREEYYLKNKEPRPGTEEYFKW
                     QTDMEAVHGRAEVIIGKQRHGPTGTVPLQFKADVTRFSDLAQEDHMPERMS"
     gene            2293..3639
                     /gene="alr"
                     /locus_tag="VLJ17_00175"
     CDS             2293..3639
                     /gene="alr"
                     /locus_tag="VLJ17_00175"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HSV21423.1"
                     /translation="MKARFSPALAPSAQTSVAGQLGLPAVEQIASGQAVTTDAAVSET
                     ASAAIKPAAPAPASLEVAHGAPSVPAELETGGILTIDLTAIVKNWTALAQRVVPSDCA
                     AVIKADGYGCGIDRVAAVLNKAGCGTFFVANLAEARQARAAAPDAVVYVLNGFPPGTA
                     PTFAEINARPVIGSLAEFLEWDAYRTATLWRGGAALHFDTGMNRLGFAIEEAPLFAAR
                     LKMPDHGISLIMSHLACAETPSHALNAKQVALFRDLRFMFRGTPTSLANSSGIFLSPA
                     THCDMVRPGAALFGVNPTPATQNLMEPVVSLKARIVQVREVRRGETVGYGATWTAARP
                     SRVAVVSVGYGDGYPRAASSATGKGRVKPGVKSAAKSGAVALIANRRCPIAGRISMDL
                     MAFDVTSLPEDLVRRGAYVTLIGDGITVDDVAGWSSTIGYEVLTGLGRRYRRVWKP"
     gene            3659..4519
                     /locus_tag="VLJ17_00180"
     CDS             3659..4519
                     /locus_tag="VLJ17_00180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21424.1"
                     /translation="MMSYRGSTRVLAFAAALIATMGSAQADDESKYPDWKGQWTRFAV
                     RLPTQPSHDQTKPWGFGQQAPLTPEYEKVLADSIADQAIGGLGNFPTTLGRAAGMPHM
                     MMAFGPLELVVTPDVTYVLIGWYDHYRRIFTDGRDWPAEIEPTFQGYSIGKWIDTDGD
                     GRYDLLEVETRGFKGPRAYDEAGLPLHFDNQSVFKERIYRDKADPNILHDEITTIDHA
                     LTRPWTVDKKYVRNPNPRPDWPEYYISEGNGQVAVGKENYFLSAEGFLMPTKKNQAPP
                     DLRYFKQTQK"
     gene            complement(4829..5551)
                     /locus_tag="VLJ17_00185"
     CDS             complement(4829..5551)
                     /locus_tag="VLJ17_00185"
                     /inference="COORDINATES: protein motif:HMM:NF015823.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-type transport auxiliary lipoprotein family
                     protein"
                     /protein_id="HSV21425.1"
                     /translation="MTEAARQALRRIDSVLADNSDPLKSAIANLNTFTAALARNSDRV
                     DTILAGLERATGGSAKSAVPKYYDLAPPRTFPPPDKVAKSQLVVLEPTAMVALDTQRI
                     IIEVATGETAGPGNAQWSDTIPKLLQAKIVQSFENSNYLGAVARPMEGLTADYQLAID
                     VRSLQVSDGPDLPQQSAAGSMAHVAFAAKIVADNGRIIGSRTFDAFVPAPDLDAAAAA
                     AAINKAFAKAVTDLVMWTAGVI"
BASE COUNT         1172 a         1808 c         1821 g         1103 t
ORIGIN      
        1 tgagccttgt cggttaggcc ggggcgttgc acatcgatga tcatggcgca acgcggcacg
       61 ctttgattga accttgttcc cttgtgcagc cgttgactac caaaccaaga cgcgggacgc
      121 catggcgctc gaatcgactg cacgcaggca ggtggtgaat cccacgccct cggcgccgcc
      181 ctatcgcgcc gctccgcata acatcgaact agagcaagcg ctgctcggcg ccatcctggt
      241 gaacaacgaa gcgttctata gggtttcgga ttttctcgaa ccgcggcatt tcttcgagcc
      301 cgtccaccag aagctgtacg aaatcacctc aagcctcgta cgcgtaggca agaccgcaac
      361 cccaatcacg ttgaagacct tcctgccgcc cgacctggac atcgccggac tgacggcaag
      421 tcaatatctc gcccgcctcg ccgctgaagc gacgaccgtc atcaacgcgt cggactacgg
      481 tcgcaccatc tatgatctcg ctattcgtcg ctccctgatc gtgatcggcg aggagatggt
      541 caacgccgcc tacgatgctg cggtcgacga gcggccgcgg gatcagatcg agcaggcgga
      601 acgcaacctc tacgagcttg ccgagaccgg acgctacgac ggcgggttcc agcgcttcgc
      661 ccaggctctt acgaccgcgg tcgagatggc ggcgcacgcc taccagcggg acggaaaatt
      721 gtcggggctt gccagcggcc tcaaggacct cgaccgcatg atgggcggcc tgcagaaatc
      781 cgacctgctc atcctggcgg gtcgccccgg catgggcaag acagcgcttg ctaccaacct
      841 cgcatacaac atcgccaagg cctgggaggg cggtgtgcgc gccgacgggc aaatggagtc
      901 gaccaatggc ggcatcgtcg gatttttttc ccttgaaatg tcggcggagc agctcgcaac
      961 gcgcatcctt tcggagcaga ccgaaatcgc ctcctatcgg attcggcgtg gcgagataac
     1021 gccctccgac tttgaccgca ttgccgagac ggcgcgcgag atggagcgga ttccgcttta
     1081 tatcgacgag accggcggtc tttcaatcgc ccagctggcg gcgagggcgc gccggctcaa
     1141 gcgccagcgc ggtctcgacc tgctggtgat cgattatatc cagctcctgc agggatcgag
     1201 ccgtcgcgca ttggaaggtc gtgtccagga ggtgaccgag atcaccacaa gcctcaaagc
     1261 gctggccaaa gagctcggca ttccgatcct ggcgctgtcg cagctctccc gcgcggtcga
     1321 aaatcgcgat gacaagcgcc cgcaactctc ggacctgcgc gaatccggtt cgatcgagca
     1381 ggatgccgac gttgtcatgt ttgtgtttcg cgaagaatac taccttaaga ataaagaacc
     1441 gcgcccaggc actgaagagt acttcaagtg gcagacggat atggaagccg tgcatggccg
     1501 cgctgaggtt atcatcggca aacaacgcca cggcccgacc gggacggtgc cgctgcagtt
     1561 taaggccgac gtgacgcggt tctccgattt ggcgcaagag gatcatatgc cggagcggat
     1621 gtcgtaatct taagtcactg cggctttgac gcgattcccc ggtcacattt cgaaggacct
     1681 ctggggggac ccccgtactg acgagccaca acgcgaattg ccgaccggga tcagtatggc
     1741 gggattgccg accgggctcg tgcagcctaa caaggccccg cgaggccgat gaccttcatc
     1801 tggtcctgga attgcgcact gaccgcgcga tcgcgagatc atcgaattcc agcggcgcgg
     1861 ccactttggc aagcgtggag gccgtgcaag aacgcgaacg ccgtcggcgc ggacccaagt
     1921 tggatttggc cgtccacgaa agacatcgag ggtcacgacg acgtttgacg cgccgataac
     1981 gggtcattgg gcacagccac agcgcttaac cccgagatta agaaaaagat ttgcgagcga
     2041 aacctgccag ggcaccgtca taaatcctcg tcaataagaa cttcacgcgg cgactttctg
     2101 acttttcgga atcggcatat atcgagcgcc cccaatcgcg cgattgcgca gccgcgcccc
     2161 ctggttgccc gcaagagtgc agtcgccgca caagaatccg cacccgttct acccgccata
     2221 tggtaagtct gggtcagcgg caactgatga tatccaaatt cgcgggagag gcccattttg
     2281 gcgtttggca aattgaaagc gagatttagc ccggcgctcg ccccatcggc gcaaacatcg
     2341 gtcgccgggc agctcggctt gcccgcagtg gagcaaatcg cctccggcca agccgtgacc
     2401 accgatgcgg cagtctccga gactgcgtca gcggctatca agcccgccgc tcccgcgcca
     2461 gcatcacttg aagtggcgca cggcgcgcca tcagtcccgg ccgagctcga aacgggcggc
     2521 atcctcacca tcgatcttac cgcgatcgtc aagaactgga cggcgttggc gcaacgggtc
     2581 gttccgtcgg attgcgccgc ggtcatcaag gctgacggct atggctgcgg catcgatagg
     2641 gtggcggccg tactcaacaa ggccgggtgc ggcaccttct tcgtcgccaa cctcgccgag
     2701 gcgcgccaag cgcgtgcggc agcacccgac gccgttgttt atgttctcaa cggctttccg
     2761 cccggcactg ctccgacatt tgcggaaatc aatgcacggc cggtcatcgg cagtctcgcc
     2821 gaattcctcg aatgggatgc ataccgcacg gcgacgctgt ggcgcggcgg cgcggccctt
     2881 catttcgaca ccggtatgaa ccgactcggc ttcgcgatcg aagaggcacc gctgttcgct
     2941 gcgcgtttga agatgccgga ccacggcatt tcgcttatta tgagtcacct ggcctgcgcc
     3001 gaaaccccaa gccacgctct caatgctaag caggttgcgt tatttcgcga tttgcgtttc
     3061 atgttccgcg gcactccgac gtcgctcgcc aattcgtcgg gcatcttcct ctcccccgct
     3121 acccattgcg acatggtgcg tcctggcgcc gcgttgttcg gcgtgaaccc taccccggcg
     3181 acccagaatc tgatggagcc ggtggtcagc ctcaaggccc gcatcgtaca ggtgcgcgag
     3241 gtgcgacgcg gcgagacggt gggctacggg gcaacctgga cggccgcgcg gccgtctcgg
     3301 gtcgccgtcg tgtcggtcgg ctatggggac ggctatccgc gcgccgcgag tagtgccacg
     3361 gggaagggcc gcgtcaagcc gggcgtcaaa tcagccgcta aatccggtgc cgttgcgttg
     3421 atcgcaaacc ggcgctgccc catcgcgggt cgcatttcca tggatctgat ggcgttcgac
     3481 gtcaccagcc tgccggagga cttggtgcgc cgcggcgcct acgtgaccct gatcggcgac
     3541 ggcatcacgg tcgacgacgt agctggatgg agcagcacca tcgggtatga ggtgctgacc
     3601 gggctggggc gccggtatcg gcgagtgtgg aagccataga cgtgctgcag ggaggaccat
     3661 gatgtcgtac cgaggctcga cccgggtgct ggcattcgcc gctgcattga tcgcgacaat
     3721 gggcagcgca caggcggacg atgagtcgaa atatcccgat tggaagggtc agtggacgcg
     3781 gttcgcggtt cggcttccca cccagccatc tcacgaccag accaagcctt gggggttcgg
     3841 ccagcaagcc ccgctgactc cggagtatga aaaggtcctg gcggacagca tcgcggatca
     3901 ggccatcggg ggactgggca actttcccac cacgttaggc cgcgccgccg gcatgccgca
     3961 catgatgatg gcatttggac cgctggaatt ggtggtgacg ccggatgtca cctatgtctt
     4021 gatcgggtgg tatgatcact atcgtcggat ctttaccgac ggacgcgact ggcctgcgga
     4081 aatcgagccg accttccagg gctactcgat cggcaaatgg atcgataccg acggcgacgg
     4141 ccgctacgac ctactcgaag tcgagacgcg cggctttaag ggaccgcgcg cttacgatga
     4201 agccggccta cctctgcact ttgacaatca atcggtgttt aaggagcgca tctaccgcga
     4261 caaggccgat ccgaatatcc ttcatgacga aatcaccacg atcgaccatg ctttgacgcg
     4321 tccgtggacc gtggacaaaa aatacgtgcg caaccccaat ccgcggccgg actggccgga
     4381 atattacatt agcgagggca acgggcaggt tgccgtcggc aaggaaaact atttcctgag
     4441 cgcggagggc tttttgatgc cgaccaagaa gaatcaggcg ccgcccgatt tgagatattt
     4501 caagcaaacc cagaagtgat ggcggatgtt acgctgttgg cgtgcttgtg acgttgcgaa
     4561 gtcgcggtca tattgaacga aggtgctgtg aaatcagggc ctaagagttc tgtttctaaa
     4621 tatccatcag gaatcattct tccaaagcgt ctgtcattgc cggcgcttgc ggacgatctg
     4681 ggcgcgcgcg aggtcttggg gcgcgcgcgc gcgcgaggtc ggcgaacaat ggcaattgag
     4741 ctgccgtaga ccgctcaatg gttcatgcgg ttctacgcag tgcccggcac ccagcgccgg
     4801 cgcgctaatt ttctggcctg atcattattc aaataacgcc agcggtccac atgacgaggt
     4861 cggtgaccgc cttcgcgaat gccttgttga tagcagctgc tgcggcggcg gcgtcaaggt
     4921 ctggagccgg aacaaaggca tcaaatgtcc gcgagccgat gatacgtcca ttgtcggcca
     4981 caatctttgc ggcgaacgcg acgtgagcca ttgagccggc tgccgattgc tggggcaggt
     5041 cgggtccatc ggaaacctgc aagctgcgaa cgtcgatggc gagctgataa tcggcggtga
     5101 ggccctccat gggtctggca acggcgccga gatagttcga attctcgaaa ctctggacaa
     5161 tcttcgcctg gagcaacttc ggaatggtgt cgctccactg cgcattaccg ggacccgcgg
     5221 tctcgcctgt cgccacctca atgatgatcc tctgggtatc aagggcaacc atagccgtcg
     5281 gttcgagcac gacgagttga ctcttcgcca ccttgtcggg aggcggaaag gtccgcggcg
     5341 gtgcgaggtc gtagtatttc ggcaccgcgc tctttgctga cccgccggtc gcgcgctcaa
     5401 gaccagccag aatcgtgtcg acgcgatccg aattgcgtgc gagcgctgcg gtgaaagtgt
     5461 tgaggtttgc gattgcactc ttcagcgggt cggaattgtc cgccagcacg gaatcgatcc
     5521 ggcgcagcgc ctggcgtgcc gcctcggtca cgctttgccc tgccgtgggg tcggcccacg
     5581 aggatcggcg gctcggtcgg cgacggcgaa aacagcggcg ccgtggaagc accaccgagg
     5641 agcgaaacca cgggaacacc cgtcaggcca tggtactcca aaccggcctg cgtatcggtg
     5701 cggatcggcg tcgtcgatac gaccgcaatc gttgcagtga cctgccgagg attgcgcaga
     5761 tcaagactga ggccggtgac ttcgccgacc cgaatgccgt caaatagtac gggggcgccg
     5821 gtcagaaggc ctgacactgt gttctcgaaa cgcacgctgt aaaccgtccg ttcgccaaga
     5881 ccaccgctat tatgcagcca atag
//
LOCUS       DATILV010000012         3886 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2559797, whole genome shotgun sequence.
ACCESSION   DATILV010000012 DATILV010000000
VERSION     DATILV010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3886)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3886)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3886
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2559797"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..184
                     /locus_tag="VLJ17_00190"
     CDS             <1..184
                     /locus_tag="VLJ17_00190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019858915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HSV21426.1"
                     /translation="VAELEAIFGWQGGGMASLDTRAADRARLAKGAMAKLERTPSEQS
                     IPALSKKVRGSGGKDK"
     gene            249..482
                     /locus_tag="VLJ17_00195"
     CDS             249..482
                     /locus_tag="VLJ17_00195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21427.1"
                     /translation="MSRLLSATSNSVEGPLSADISDEVLEEQLYSTLGSKQGHRCHAE
                     PDFSRIHRELKRKHVTLSILWEEYIEQNPEDYR"
     gene            complement(875..1114)
                     /locus_tag="VLJ17_00200"
     CDS             complement(875..1114)
                     /locus_tag="VLJ17_00200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21428.1"
                     /translation="MYAKISVALATIVAITSGAFAAQKPHSINTAFDGTYVGAYADAG
                     VRAKNDVYYSNSLGRQSVANPDRDFSIENLSSHAN"
     gene            complement(1238..2008)
                     /locus_tag="VLJ17_00205"
     CDS             complement(1238..2008)
                     /locus_tag="VLJ17_00205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012592280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HSV21429.1"
                     /translation="MCGAAQSGAGTTKLMVVVRYNELTMRQKIETLAAVALFRSLDPN
                     KIRLLNTQCTWRQVPQNQWIIDYEDTGSDVVFVVSGVAHVKLQSISGREVMLREIKAG
                     EFFGELAAIDNLPRSAGIVAVTNVTIARMPASVFRATIHAHPDVCDQLLARLSAEIRK
                     LANRINEFTTLDARFRLYAELLRLARPAAGGQKDAVISPPPVHAQIAARISSRREAVA
                     RELKALERSGLVERRQGSLVLTDPDQLRNMIDRAANPD"
     gene            complement(2491..>3886)
                     /locus_tag="VLJ17_00210"
     CDS             complement(2491..>3886)
                     /locus_tag="VLJ17_00210"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HSV21430.1"
                     /translation="AVGVRVNFLDGLEITFQSVLYRFWIASPKTSLPWQFLLLVVLWS
                     HGCIGLRAWLCSKSWYRDLAKPLGLVAILVPIIALLGMVTAGFDLRDTVLHDPSKAAA
                     LSAAFAEEEAGNSANKRDVANGLSIGYLGLVIGTLALRRARDWRARRFQAVRITYPGH
                     RVVTVPPGFSVLEASRWAAIPHAAVCGGRSRCSTCRIRVIDGLETLAAPQAPELQTLQ
                     RIKAPLDVRLACQTRPRTDLSVEPLIPVGKDRPPKAARFEAALTGGRELTIGAMFVDM
                     RDSTRIASGRLPYDVLFLFDRYIQAVTGGVRHNGGRTISIAGDGVMSVFGIDRRPAIA
                     AQDALKAALDVWSGLEALNEEMVHELNQPLSIGIGIYFGLAVVGFVSVDDQQSLQFIG
                     DTGNLAAKLEAETKRLDCTLVVSVSVLSLAAADTSKIERRFVSIPGRADSVEAAVFRK
                     RRDLEGMLATLRKV"
BASE COUNT          861 a         1151 c         1082 g          792 t
ORIGIN      
        1 cgtcgccgag ttggaagcaa tctttggctg gcagggcggc gggatggcct cgctggacac
       61 ccgtgcagcg gacagagccc gattggcgaa aggcgcaatg gcgaagctgg agagaacacc
      121 cagcgaacaa tctattcccg cgctctcgaa aaaggtgcgg ggctcaggag gaaaagataa
      181 atgatttcca gtccttagcc gccaacacga ttttcgggct gaacgtcgcc gaaccgtcga
      241 tcgcaagatt gtctaggcta ttgtccgcca cgtcgaattc ggtcgagggg ccgctgagcg
      301 ccgacatcag cgacgaggtg ctggaggagc agctctacag cacgctcggc agcaagcaag
      361 gacaccgctg ccatgctgag ccagacttta gccggatcca tcgcgagctc aagcgcaagc
      421 atgtcacgct gtcgattcta tgggaggagt acatcgaaca gaatcccgag gactatcggt
      481 aagagagact gctgagcact catgtcggcc tccctttatg gtttgccgag gtgcgcgcct
      541 cgtccctgcc tgcgcgagct gggcggcgct acgtgaagta cctcaggtcc ggctacccct
      601 gccggctctc atctgaccca cgcgcgacgc gcaatttgct aacgcgaccc ttctccatgc
      661 cgtcatcctt gagcgcttgg tcgggcttgc ggctcgccgc caccagttaa gcctaacgcg
      721 gtccggattg catttgaaca gatcgatact ttcacacgtc acgatgtgcc accggcgacg
      781 gcagtctgcc tccggaaccc gcaaagtccg cgaccctgcc ccagtccgaa gcgcaaaact
      841 gccgacacgc gccgccgatt tgccgcgacc agcatcagtt tgcgtgtgac gacagatttt
      901 cgatgctgaa atctcgatct ggattggcga cagattggcg tcccagtgaa ttggagtaat
      961 agacatcgtt cttggctcga acgcccgcat ctgcgtatgc gccaacgtac gtgccgtcga
     1021 aggcggtgtt tatgctgtgc ggcttctgcg ccgcgaatgc accggaagta atcgcaacga
     1081 tagtggcgag agcaactgag atcttggcgt acatcgtaat gtctcctgtc tggaatttgt
     1141 cacaccgtcg ttggtgtgag gagacactag tccaggatcc ggaatgcgcc tgtgcgtaat
     1201 cgcacagtac cgttccctgc gtcgcgtctt gtacaactca gtccgggttg gctgcgcggt
     1261 caatcatgtt gcgcaactgg tccggatcgg tcaacacgag cgagccttgc cgacgctcaa
     1321 caagacctga ccgttcaagg gccttcagct cgcgtgcaac cgcctcacgg cggctgctga
     1381 tgcgcgcagc aatttgcgcg tggacaggcg ggggtgaaat gacggcgtcc ttctgcccac
     1441 ccgcagcggg ccgagccagg cgcagcagct cagcatagag acgaaagcgc gcgtccagtg
     1501 ttgtgaactc attgatccgg ttagccagct tacgtatctc ggccgagagg cgagcgagca
     1561 gctggtcaca gacatctgga tgagcatgaa tcgtggcgcg gaagactgag gctggcatgc
     1621 gcgcaatggt gacgttcgtc accgcgacga tgccagccga gcgtggtaga ttgtcaatag
     1681 cagccagctc gccaaagaac tcgccggcct tgatctcgcg caacatcacc tcgcgccctg
     1741 agatcgactg gagcttaacg tgcgccacgc cgctgacgac gaagacaaca tcgctgccgg
     1801 tatcctcgta gtcgataatc cattggttct gcggcacctg tcgccaggta cactgtgtat
     1861 tgagtaaccg tattttattt ggatcaagtg agcgaaaaag ggccacagca gccagggtct
     1921 cgatcttttg tctcatcgtc agctcgttat aacgcacgac aaccatgagt tttgtggtgc
     1981 ccgcgccgct ttgtgccgcg ccacacattg acgttttgtc aagccaaatt ccactgtgcg
     2041 attcagcaca cctatgatgc ggtggtcatc ctacttttgc ggttgttagc atcgatcact
     2101 gaatccctgt taggtcagga caacctgcaa tgtttacaaa atccccgttg cgaaacaaat
     2161 cggttattca aacggccatc tccactaccg ccatctcagt acttatcgca ctggcaatgc
     2221 tgtcagcagg aaaagccaac gagcaatgtc gccggccaac aacgatcttg tgcgagttga
     2281 agtcgccgct cgtccccttg cgttcgtcga tcgacgggta tgattggagt agtgacgagc
     2341 tttctggcca aaacagcacg acagggccga cattcccagt ttgttgcagg ctaatgtcgt
     2401 gaaggcgatt gttttcgaag cgagacctaa aagcggacga aatggaatct ccatttgcta
     2461 tttctgacct ccaattcgtg acaagcgcag ctagaccttg cgcaaggtcg caagcattcc
     2521 ctctaagtcg cgtcttttcc ggaacacggc tgcctcgaca gaatcggctc gtcctggaat
     2581 tgatacaaaa cgccgctcga tcttgctcgt gtctgccgcg gctaaactca agaccgatac
     2641 ggagacaaca agtgtacaat caagtcgctt ggtttccgcc tcaagctttg ccgcgagatt
     2701 gccagtgtcg ccgataaact gcagggactg ctggtcatcc accgagacga agccgacaac
     2761 cgccaagccg aagtaaatcc cgattccaat actgagcggc tggttaagct cgtgcaccat
     2821 ctcttcattg agggcctcca atccactcca gacatctaat gccgccttga gtgcatcttg
     2881 ggccgcgata gcaggccggc gatcgatacc gaacacgctc atcacgccgt ctccggcaat
     2941 gctgatcgtc cggccaccat tgtgtcgaac gcctccggtc acggcttgaa tgtagcgatc
     3001 gaacaaaaat agaacgtcat atggcaaccg accgctagca atccgagtcg agtccctcat
     3061 gtcaacgaac attgcaccaa tggtcagctc gcgccccccg gtcagcgcgg cctcgaaccg
     3121 agccgccttc ggcggccggt ccttgccgac tggtatgagc ggttcgaccg agaggtcggt
     3181 tcgtggccgt gtctgacatg caaggcggac atccaggggc gccttgatgc gttgtagcgt
     3241 ctgcagctct ggcgcttgcg gcgccgctag cgtttccaag ccgtcgatga cccggatgcg
     3301 acacgtggaa caacgactgc ggcctccaca aaccgcggca tgtggaatcg cggcccagcg
     3361 acttgcctct aacacggaaa agcccggcgg gacggtaaca acgcggtgtc caggataggt
     3421 tatgcgcacg gcctgaaaac gtctcgcccg ccaatctcgt gctcttctga gagccaacgt
     3481 tccaatcacc aagccgagat atccgatcga taacccatta gcgacgtcgc gcttgtttgc
     3541 ggaattaccc gcctcctcct cggcaaatgc agccgatagc gctgcagcct tggaggggtc
     3601 atgcaaaact gtgtcacgca ggtcaaatcc ggcggtaacc atccccaaca gggcgataat
     3661 tggtacgagg attgccacca agccgagcgg cttcgccagg tcgcgatacc aggatttgga
     3721 gcacagccat gctcgtaatc cgatgcaccc atgactccaa agcacgacta ggagcagaaa
     3781 ctgccaaggc agcgaagtct ttggtgaagc gatccagaat ctgtacagaa cgctttgaaa
     3841 ggtgatctcg agcccgtcga gaaagttgac ccggactcca actgca
//
LOCUS       DATILV010000013         1721 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2815197, whole genome shotgun sequence.
ACCESSION   DATILV010000013 DATILV010000000
VERSION     DATILV010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1721)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1721
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2815197"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(238..1401)
                     /locus_tag="VLJ17_00215"
     CDS             complement(238..1401)
                     /locus_tag="VLJ17_00215"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HSV21431.1"
                     /translation="MRKAGAGFLLAALVAASTAPLCSGLAFAQQLPTQAVASRPVPEA
                     DAPQSAQEPADQAAANCPGHPDALGTSRVLAIDPAQYRRIGHMQYSDSLPLADKEVVL
                     TFDDGPILPYSNQILDILASQCVKATYFLVGEMARAFPATVRRIYEEGHTIGTHSEHH
                     PTRFGQLPVERMRHEIDRGISDVSAALGDPKYLAPFFRIPGLARSRLVESELAARELS
                     VFSSDTDADDWHHRISGQQIIALAMRRLEAGGKGILLLHDIHPATVAALPGLLKELKD
                     KGFHIVQVVPAASYVIAMANKPKARTLASTLPGEASAPRKHKFVGRAEKRKQHIVHAD
                     KNERRTEHAHRPKRTHTSANGQHKKRRNAANLDDLAMSEVSPLPESDTEFVAC"
BASE COUNT          333 a          461 c          549 g          378 t
ORIGIN      
        1 cctcaccgaa gggcgcgcac taagaggcgc cgcgtggtgc aattaaggcg acagttcgat
       61 tagtttggga ctatcgcaaa gggccgggtc gaaacgtttt ttattgttgc tttttgtgat
      121 tgcaggccgg tctactacgt aaagtgggcg atgcccgcta ttcgcacaaa gcggaccctt
      181 cgtggctgag tcccaatgtg cgctttcgaa ggtaaagcga caacgcactc tcagttttta
      241 gcaagcgaca aattccgtgt cgctctcagg gagcggactt acctcggaca tcgccaaatc
      301 atcgagattc gctgcgttgc gccgcttttt gtgctgaccg ttggcactag tgtgggtgcg
      361 cttaggccga tgcgcatgct ccgtccgtcg ctcgtttttg tctgcgtgga cgatgtgttg
      421 ttttcgcttt tccgcgcgac cgacgaattt atgtttgcgg ggagccgacg cctcgccggg
      481 cagcgttgag gccagagtcc gggctttggg cttgttcgcc atcgcgatca cgtaggacgc
      541 ggccgggacc acttgcacaa tatggaaacc tttgtccttg agctccttga ggagcccggg
      601 cagcgcggcg acggtcgccg gatggatgtc gtggagaagc agaatgcctt tgcctcccgc
      661 ttcgagtcgt cgcatcgcca aagcaatgat ctgttggcca ctgatgcggt gatgccagtc
      721 gtccgcgtcg gtgtcggatg agaataccga cagctcgcgc gccgcgagtt cgctttcgac
      781 gagacgggat cgcgccagac cgggaatacg aaagaacggt gcgagatatt tgggatcgcc
      841 gagtgcggca ctgacgtcag aaatgccccg gtcgatctcg tgacgcattc tctcgactgg
      901 caattggccg aaccgggtcg gatgatgctc actgtgcgtc ccgatcgtgt gtccttcctc
      961 gtaaatgcgg cgcaccgtgg cgggaaaggc gcgggccatt tcaccgacca ggaaataagt
     1021 cgctttcacg cactgtgaag caagaatgtc gaggatctgg ttggaatagg gaagaatggg
     1081 accgtcgtcg aaagtcaaga ccacttcctt gtcggccagc ggcagcgagt ctgaatattg
     1141 catgtggccg atgcgccggt attgagccgg atcgatcgcg aggacgcggc tcgtgccgag
     1201 cgcgtcggga tgtcccggac agtttgcggc ggcttggtca gcaggttctt gagcagactg
     1261 cggtgcgtcg gcttcgggga cgggccgtga cgcgacggcc tgcgtgggca gctgttgcgc
     1321 gaaagccaaa ccagagcata gcggcgccgt gctcgccgcg acaagcgccg ccaacaagaa
     1381 gcctgctccg gccttcctca ttcccggccc gaaaaaccga cgattcggca atagcgccga
     1441 acggtcaggc ataatagatc acgaaatccc gcctgaattt tgagtgcagc agcctaaggt
     1501 aatgtgaacg cgagggctgc ccgtggggtg gggtggtgat acttggcggc tttcgcaggc
     1561 cgcactcaac ggtcggtgcg agagttaaca ggccaatgtc tgcttttggc acaaagcgga
     1621 catttctcga ttgagttcta atgtccgctt ttgggggtaa agcggacatc gttatttcaa
     1681 agcttcacgt ctgcttttga ccatagcgga catgcggcgg g
//
LOCUS       DATILV010000014         1948 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1026592, whole genome shotgun sequence.
ACCESSION   DATILV010000014 DATILV010000000
VERSION     DATILV010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1948)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1948)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1948
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1026592"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..280
                     /locus_tag="VLJ17_00220"
     CDS             <1..280
                     /locus_tag="VLJ17_00220"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012591024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0035550 - urease complex [Evidence IEA];
                     GO_process: GO:0043419 - urea catabolic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="urease subunit beta"
                     /protein_id="HSV21432.1"
                     /translation="AISLTVANTGDRPIQVGSHYHFAETNAALAFDRQAAIGYRLDIP
                     AGTAVRFEPGQSREVSLIPYQGARLIYGFNQAVMGSAASGFQRPGLFS"
     gene            300..>1948
                     /gene="ureC"
                     /locus_tag="VLJ17_00225"
     CDS             300..>1948
                     /gene="ureC"
                     /locus_tag="VLJ17_00225"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018236416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009039 - urease activity [Evidence IEA];
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0019627 - urea metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit alpha"
                     /protein_id="HSV21433.1"
                     /translation="MPYAMSRAAYAQMFGPTVGDKVRLADTNLIIEVEKDLTTYGEEV
                     KFGGGKVIRDGMGQSQRSRSEGAVDTVITNALILDHWGIVKADIGITDGRISAVGKAG
                     NPDVQPNVDIIIGPGTEVIAGEGKIVTAGGIDVHVHFICPQQIEEALYSGLTTMMGGG
                     TGPAAGTTATTCTPGPWHILRMLQSADAFPMNLGFFGKGNASLAAGLVEQIEAGACGL
                     KLHEDWGTTPAAIDRCLSVADDMDVQVLIHTDTLNESGFVENTIAAFKGRTIHTFHTE
                     GAGGGHAPDIIKVCGEANVLPSSTTPTRPYTVNTPEEALDMVMITHHLDRRIPEDVAF
                     AESRIRKETIAAEDILQDLGALSIVSSDSQAMGRVGEVIMRTWQTADKMKQQFGRLPE
                     EQGDNDNFRARRYIAKYTINPAVSQGISTYVGSIEVGKLADLCIWEPAFFGVKPDMVL
                     KCGMIAAAVMGDPNGSIPTPQPEYFRPMFAAYGRAMAESSVTFVSQALMQKSGNLELA
                     KKLLPVTNTRKIGKHSMVLNDATPRMEINAETYEVRADGRLL"
BASE COUNT          424 a          579 c          580 g          365 t
ORIGIN      
        1 cgccatctct ctgacggttg ccaacacggg tgaccggccg atccaggtag gcagtcatta
       61 tcatttcgcc gagaccaacg cggctctggc gtttgatcgg caggctgcta ttgggtatcg
      121 cctggacatt cccgcgggaa cggctgtgcg tttcgagccg gggcagtcgc gcgaagtttc
      181 gttgatcccg tatcagggtg cgcgcctgat ttatggcttc aaccaggcgg tcatgggtag
      241 cgctgcctcc ggtttccagc gccctggcct gttctcttga agcatcgagg taatcgaaaa
      301 tgccctacgc aatgagccgc gccgcgtatg cacagatgtt tggcccaaca gtcggcgaca
      361 aggtacgcct cgcggatacc aacctgatca tcgaggtgga aaaggacctc acgacctacg
      421 gtgaggaggt gaagttcgga ggcgggaaag tcatccgcga tggcatgggc cagtcgcagc
      481 gctcccgcag cgagggcgcc gttgatacgg tcatcaccaa cgcgctgatt ctcgatcact
      541 ggggaatcgt gaaggccgac atcggcatca ccgacggtcg catcagcgcc gtaggcaaag
      601 ctggcaatcc cgatgtccag ccgaacgtcg acatcatcat cggacctggg accgaagtga
      661 tcgcaggaga gggcaagatt gtgacggccg gcggcatcga cgtgcatgtc cactttatct
      721 gcccgcagca gatcgaggaa gcgctctact caggtctcac aacaatgatg ggcggtggga
      781 caggtccggc ggccggcacg actgcgacga cctgcactcc gggtccctgg cacattctgc
      841 ggatgctcca gtctgccgat gcgttcccta tgaatctagg cttcttcggc aaaggcaatg
      901 caagtttggc ggcgggcctc gttgaacaga tcgaagccgg ggcgtgcggc ttgaagctac
      961 atgaagactg gggcactacg cccgccgcca tcgatcgctg cctttccgtc gccgatgaca
     1021 tggacgttca ggtcctcatc cacaccgaca cgttgaacga aagcgggttt gtcgaaaata
     1081 ccatcgcagc cttcaaaggc agaacgattc acacctttca cacagaaggg gcgggtggcg
     1141 ggcatgctcc ggacatcatc aaggtgtgcg gcgaggccaa tgtgctcccg tcctccacca
     1201 ctccgacacg cccctacacc gtgaatacgc ctgaagaggc gctcgatatg gtcatgatca
     1261 cccatcacct cgacaggcgt atccctgagg atgtcgcctt cgccgagagc cgcatccgca
     1321 aagaaactat cgcggccgaa gacattttgc aagacctggg cgcgctctcg atcgtttcct
     1381 cggatagcca agccatgggc cgtgttggcg aagtcatcat gcggacctgg cagaccgccg
     1441 acaaaatgaa gcaacagttt ggacgcctgc ccgaagagca aggcgacaac gacaatttca
     1501 gggcgcgtcg ctacatcgcg aagtacacca tcaacccggc cgtgtctcaa ggcatttcaa
     1561 cgtatgtggg ctcgattgaa gttggaaagc ttgccgacct gtgtatctgg gagccggctt
     1621 tcttcggcgt gaagccagac atggtgctga aatgcgggat gatcgccgcc gctgtcatgg
     1681 gagatcccaa cggatccatt cctacaccgc agccagaata tttccgcccg atgttcgccg
     1741 cgtacggccg ggccatggcg gaaagctcag tgacattcgt cagccaggcc ctgatgcaga
     1801 aaagcgggaa cctggagctt gcaaagaaac tgctgccggt caccaacacg cgcaagatcg
     1861 gtaagcactc gatggtgcta aacgacgcca ccccgcgcat ggagattaac gcggaaactt
     1921 acgaagtgcg ggccgacggc cggcttct
//
LOCUS       DATILV010000015         1703 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3837595, whole genome shotgun sequence.
ACCESSION   DATILV010000015 DATILV010000000
VERSION     DATILV010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1703
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3837595"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(162..620)
                     /locus_tag="VLJ17_00230"
     CDS             complement(162..620)
                     /locus_tag="VLJ17_00230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21434.1"
                     /translation="MTKQTAEVDSGATAVSAMRSPVNDCADTGPIATTEEFKAALLAT
                     RDWIGISPTQLQMLQAQCRAPDATITAAQLADQLRFKNFAAARLQYGTLARAVAEKLG
                     YAPPQKGKGAVRWWFALSIGQDGHDDAGDGQLKWTMRPELVAALRAMKWA"
     gene            complement(626..850)
                     /locus_tag="VLJ17_00235"
     CDS             complement(626..850)
                     /locus_tag="VLJ17_00235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21435.1"
                     /translation="MTASIASGASCASPMLRDRFLNALDASDDALLRDLARHLQSCTN
                     TLPSTTCILLGLPEGSTYGVGALAVIKRQS"
     gene            1122..1346
                     /locus_tag="VLJ17_00240"
     CDS             1122..1346
                     /locus_tag="VLJ17_00240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000014591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HSV21436.1"
                     /translation="MTGKVDMGTGTVKWFNDGKGFGFITPDSGGKDLFAHFSAIQGEG
                     HKSLRENQKVSFDVTTGPKGDQATNIKPLD"
     gene            complement(1443..1649)
                     /locus_tag="VLJ17_00245"
     CDS             complement(1443..1649)
                     /locus_tag="VLJ17_00245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21437.1"
                     /translation="MAEVQVFPLSGASQLQPVAIASDHRMWSSGGKMVNYKKLIDPTG
                     RKALVIDAGWTAIDGPPTGLTQVG"
BASE COUNT          334 a          511 c          511 g          347 t
ORIGIN      
        1 tttcgtaaat cgccgccttg cgttgcatcg atggatcggc atcaagccgc atcgctgccg
       61 agcctgaatt gacccgaagg gtgcacggct ttgaacgcac gccacgccgt gacgtgatcc
      121 agcgcgagcc gtcactcagc gcgttggcgc agggtacggc ttcatgccca tttcattgcg
      181 cgcagcgccg caaccagctc gggtcgcatg gtccatttga gctggccgtc gccggcgtcg
      241 tcatgcccgt cttgtccgat cgacagcgcg aaccaccagc ggacggcgcc tttgcccttt
      301 tgcgggggcg cgtagccgag cttctcggcc acggcgcggg cgagcgtgcc gtactgcagg
      361 cgcgcggcgg cgaaattctt gaacctgagc tgatccgcga gctgcgccgc ggtgatcgtg
      421 gcatcgggcg cgcgacattg cgcctggagc atttgcaact gggtcggcga gatgccgatc
      481 caatcgcgcg tcgcaagcaa cgcagccttg aactcttcgg tcgtggcgat cggtccggta
      541 tcggcgcaat cgttcaccgg ggagcgcatc gcggaaaccg cggttgcgcc ggaatcaact
      601 tcagccgtct gtttggtcat gatagtcatg attgccgctt gatcactgcg agagcgccca
      661 cgccatacgt gcttccttcc ggaagtccga gcagtatgca ggtggtgctg gggagggtat
      721 tcgtgcagct ttgcagatgc ctggccaggt cgcggagcaa cgcgtcatcg ctggcatcga
      781 gcgcattgag gaatcgatcg cgcaacatcg gcgaggcgca gctggccccg gacgcgatgc
      841 ttgcggtcat gttcgggctc cgtaaatcga atatggaagg ccccgtattg attctcgcga
      901 aggcgtcgag cggcacatat tgcgactata taccggtatt gagctcgaat cccacgaatc
      961 cgacaaaaaa cgatttgacg caacgccagg atgcgtgtac aacgtaagtg caggttcctc
     1021 aagcgaattg tcagtccgtc gtagccgctc aggcggcact tcttcaggtc tttctttctc
     1081 ccttgatgtt cccgcaccgg gcgcgagccc gtcatttcat cattacagga aaagtagaca
     1141 tgggtacagg tacagttaaa tggttcaacg acggcaaggg ctttggtttc atcacgcccg
     1201 atagcggcgg caaggacctg tttgcacact tctcggcgat tcagggcgaa ggacacaaga
     1261 gccttcgcga aaaccagaag gtgtcctttg acgtaacgac cggccccaaa ggggaccagg
     1321 cgaccaacat caagccgctc gactgagccg ctcgaattac aggcaagaga agcccgggca
     1381 accgggcttt ttttcgtttg cgcaacgggt gaagaacccg catcgagcgc ggcgcaagat
     1441 tcttacccga cctgcgtcaa ccctgtcggt ggaccgtcga tcgcagtcca gcctgcgtcg
     1501 atcaccagcg ccttgcgccc ggtgggatcg atgagcttct tgtagttcac catcttgcct
     1561 cccgacgacc acatgcgatg atcgctcgct atggccactg gctgcaactg actcgcgccc
     1621 gacagcggga atacttgcac ttcggccata cgcgaaacgt ctgcttcgtg gtcgcccacg
     1681 tattggtgtt aagcgaactt aaa
//
LOCUS       DATILV010000016         1722 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3071373, whole genome shotgun sequence.
ACCESSION   DATILV010000016 DATILV010000000
VERSION     DATILV010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1722)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1722
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3071373"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(401..1258)
                     /locus_tag="VLJ17_00250"
     CDS             complement(401..1258)
                     /locus_tag="VLJ17_00250"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSV21438.1"
                     /translation="METTIRPARATDAAECGRIIYAAFTDIADRHGFSRPFPSPEVAT
                     GLATMRLTNPGFYGVVAEEAGNIVGSNFVYLRSPVAGISPITVDPAAQNRRIGRTLMQ
                     AVMDHATAQGKPSIRLVQAAYNNGSLCLYTTLGFQTKAPLSVMNGSPLNLHFPGYDVR
                     CATMADLAACNRICHAVHGFDRGDELRDAIAASTATVVEHLGRITGYATGIAFFAHAV
                     GETNQDLKALIGAARVFAGPGFLVPTQNYDLFAWCLANGLRLIMPMTLMSIGLYCEPD
                     GAWLPSIVY"
BASE COUNT          333 a          520 c          556 g          313 t
ORIGIN      
        1 ttcgccgctt ccggcggcga caaaactacg cgccgtgagc cgaccagttc cgatcggctc
       61 ccaatccatc ggagtgagtc tccaaccggc tattcctcgg cgggttgctc cccagcagag
      121 cccgcttccg cttcaccagt cgccgacaat aatacctcaa atcccggtcc ggcgaggcta
      181 tcaaattgcg ctgctcaact ccactgcggg atgcaggcaa actcgcgctc ctcggccaca
      241 cggggatgtc atctctactt tgcacgccgg gtgacatttc tatcttgcgc cgacacacac
      301 actcgccgca gactgcggcg agagcgtcgg ataagtctcg ttcccgcacc cctgcccaat
      361 gtccactcgc acgttttcag gccggcctca aagcagacgc tcaatagaca atggaaggaa
      421 gccaggctcc gtcgggttcg cagtagagtc cgatgctcat cagtgtcatc ggcatgataa
      481 ggcgcaggcc gttcgcgagg caccaggcga agagatcgta attctgtgtc ggcaccagaa
      541 agccggggcc ggcgaagacg cgcgcggcac cgattagtgc cttgagatcc tgattggttt
      601 cgccgaccgc gtgggcaaaa aaggcgatcc cggttgcgta tccggtgatc cgaccgagat
      661 gttctacgac tgtggcagtg ctggcggcga tcgcgtcgcg caactcatcg ccgcgatcga
      721 agccgtgcac ggcatgacag atgcggttgc aggccgcgag gtccgccatg gtggcacacc
      781 ggacatcgta gccggggaaa tgtaggttga gcggcgaacc gttcatcacc gatagtggtg
      841 cctttgtttg aaagccaagc gtcgtgtaga ggcagagcga gccgttattg taggccgcct
      901 gcacaaggcg gatggagggc ttcccctgtg ccgttgcgtg atccatgacc gcctgcatta
      961 gggtgcggcc gatgcggcgg ttttgcgcgg ccggatcaac cgtgatggga ctgatgccgg
     1021 caacaggcga gcgcagatag acgaaattgc tgccgacaat gtttcccgcc tcttccgcca
     1081 ccacgccata aaagcccggg ttggtcagcc gcatcgtcgc gagaccggtt gcgacctcgg
     1141 gcgaggggaa agggcgcgag aacccgtgcc gatcggcgat gtcagtaaag gcggcgtata
     1201 taatgcggcc gcactcggca gcgtcggtcg cgcgcgccgg acggatggtg gtttccattg
     1261 gatgctcctg ctcggaccgg ggcccccggc acgtagcacc ctcacggcag cggaatcaaa
     1321 cgtttcgctg cgtcgtgttg ggaaggggta gagtcgacat gtggcgcggt ggcgtgggtg
     1381 gaaactaacg gttcctctgc gaccgacccc ggcgcttgct gtcacaagcc cctccccctt
     1441 tgtaggccag cgcgtgcaac tggaggcgga ccgcgttggt agcgaacgtg cggcacgaca
     1501 gacgggtcca cttgatcgcg cccttgccgg gagtaagcga cgacggcagc gtgatacgct
     1561 caattcgtta cccggatcgg gagtatgcac cgagccgcca ggaaccgatg gttcgcagac
     1621 tctccgctgg agggagatgg attcgaacca tcggtcccgg gcacgaaaga gccggttttt
     1681 cgttgcggaa ggcgaattgc gggaccgaac ggggggcagc ca
//
LOCUS       DATILV010000017         7698 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2304757, whole genome shotgun sequence.
ACCESSION   DATILV010000017 DATILV010000000
VERSION     DATILV010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7698
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2304757"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            414..1937
                     /locus_tag="VLJ17_00255"
     CDS             414..1937
                     /locus_tag="VLJ17_00255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018263226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="altronate dehydratase family protein"
                     /protein_id="HSV21439.1"
                     /translation="MNVAVPRFLRLNQKDNVIVAIDALTPPVEIEGVGVRQRILRGHK
                     MATTAIAPGQSILKFGQVIGFASKAIAPGEWVHEHNVEMHAFDRDYQYAQGAVAVQFV
                     PNGARATFQGYRRANGKIGTRNYLAILTSVNCSASVANFVEQEVERSAILADYPGVDG
                     VISLVHGTGCGMADRGEGFDVLRRTQWGYASHPNMAGVLMIGLGCEVFQIEHLKSEYG
                     LVEGDTFRTLTIQTAGGTRKSVEAGVAAVREMLPMANKAQRETIPASELVLALQCGGS
                     DGYSGITANPALGAAVDLLVAHGGSAILSETPEIYGAEHLLTRRARNREVGEKIVELI
                     RWWEDYTARNGNEMNNNPSPGNKAGGLTTILEKSLGAVAKGGTTPVNEVYRYAEPVTA
                     KGFVYMDTPGYDPVSATGQVAGGANVLCFTTGRGSAYGCKPTPSIKLATNSDIYRRMI
                     DDMDINCGDVLDGVSIEAKGREIFNMILRVASGERSKSEQLGYGGAEFVPWQIGATM"
     gene            1958..3166
                     /locus_tag="VLJ17_00260"
     CDS             1958..3166
                     /locus_tag="VLJ17_00260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008966417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HSV21440.1"
                     /translation="MKPTFDFAPTSTLPRDGTAGALAGRVWRPELGGPSVVAIREDGV
                     FDITSLCPTTSALAAATSPAAVVRGAAGERIGDLAAILENTPAVTRDHTKPWLLAPID
                     LQVIKAAGVTFPVSMLERVIEEKARGNPASAAAIRAEVERLVGGDLAQLKPGSPEALH
                     LKEVLIKQDAWSQYLEVGIGPDAEIFTKAPVLSAVGSFMDGGLHPASTWNNPEPEVVL
                     IVAADGRITGATLGNDVNLRDIEGRSALLLSKAKDNNASCAIGPFLRFFDETFSLDDV
                     RRMTVGLIVRGTDGFVLEGKSSIEKIARDPEDLVRQTIGATHQYPDGFALFLGTMFAP
                     TGDREASGRGFTHKDGDLVQILAPQLGSLFNKMQSSAACEPWTFGISALMVNLAARGL
                     LGSAQRSRPI"
     gene            3765..4052
                     /locus_tag="VLJ17_00265"
     CDS             3765..4052
                     /locus_tag="VLJ17_00265"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HSV21441.1"
                     /translation="MRVRTDACKYSLATLTVRERQIVRLVSKGLSNREVASRLNLTEG
                     TIKAHLHNIYQKLPISNRTALAVLSVSLSWQLEATKASVGYPPPARSWSTD"
     gene            4208..5344
                     /locus_tag="VLJ17_00270"
                     /pseudo
     CDS             4208..5344
                     /locus_tag="VLJ17_00270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612008.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            5617..6483
                     /locus_tag="VLJ17_00275"
     CDS             5617..6483
                     /locus_tag="VLJ17_00275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012456557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV21442.1"
                     /translation="MRALGLHNSTRAAMERLLFETVLVSANALLREGLTRILGAAHFH
                     IVASGSFVDDDVLDSLPEEPAILLVIDATEDFDSAIGQIEPFKRRCPTGRVAILVGQH
                     QLQLPQMVSVFRAGANACFTSFTTSEAFISSIELVMRGETILPSAILTYMFDHQRGRN
                     RVKQNGPNTDEDGNGGDNGENGHNGGDDDFDVIEAISPDVVEGHYSPHLSVRQMAILQ
                     CLIEGDSNKVIARKMKIADTTVKVHVKAILRKIRVDNRTQAAIWAMRNGPLISANGNR
                     SFNGEDQLRLHR"
     gene            complement(6731..7399)
                     /locus_tag="VLJ17_00280"
     CDS             complement(6731..7399)
                     /locus_tag="VLJ17_00280"
                     /inference="COORDINATES: protein motif:HMM:NF014453.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HSV21443.1"
                     /translation="MLGGAIGIEMRRDLCLRHNQLLKRFIDILFAVPIALLVSPVVAL
                     LALAIKLVDPGPAAYVQLRVGRNTTPLRMFKLRTMYADAERRLKEHLSRNPQANAEWH
                     RFFKLTQDPRVLPIIGNFMRRTSLDELPQLLNVIRGDMSLVGPRPFPSYHMNYFDDEF
                     RAVRVSVKPGITGMWQVSSRSNGDLQVQKAQDLFYIRNWSLWLDIYILLQTVPAVLSA
                     KGAR"
BASE COUNT         1690 a         2209 c         2265 g         1534 t
ORIGIN      
        1 gagcttgtcg tgcccgactt ggctgctgcg gtaatccaca agaagcgacg accgtcgaga
       61 tcagccgttt tatgcagcag gcggccgaag gaactctcct ggtcgaaaag atgtgtcgac
      121 agtttcggca ctagcggacc aaacgaatcg agcaacgact actaccgagg aagtttgctc
      181 tgacgtcgcg catcaagccg ctgagctgcg cgatgccgtc gatcagttcc tcaaacgggt
      241 ctccggactt cagtaactat tcggtagacg acgctcgcct cacagctttc agcgccgccc
      301 tttgatcgcc gctcgatagt cgaacacgat gaggccactt agtcgctgcg aaactgctat
      361 gctggaatac tttagttctg ctttcgcact aacccatgct tgcgagcgcc cccatgaacg
      421 ttgccgttcc acgttttctg cgcttgaacc agaaggacaa tgtcatcgtc gcaatcgacg
      481 cacttacacc gccggtggag atcgagggcg tcggagtgcg tcagcgcatc ctgcgcgggc
      541 acaaaatggc gacgacagcc attgctccag gccaatcaat tctcaagttc ggccaggtga
      601 tcggcttcgc ctcgaaagcg atcgcgccag gcgagtgggt tcacgagcac aatgtcgaga
      661 tgcatgcttt cgatcgcgac taccagtacg cccagggcgc ggttgccgta caattcgtgc
      721 cgaatggcgc acgcgcgacg ttccaaggct atcgccgcgc aaacggcaag atcggcacgc
      781 gcaactatct cgcgatcttg accagcgtga actgctcggc gtcggtggcg aacttcgtcg
      841 agcaagaggt cgagcggtcc gccatcctcg ctgactatcc gggcgtcgac ggcgtgatct
      901 cgctagtgca cggcaccgga tgcggcatgg cggaccgggg agaaggattc gatgtactcc
      961 gtcgcaccca atggggctat gcctcgcatc ccaacatggc gggagtgctg atgatcggcc
     1021 tcggttgcga agtgtttcag atcgaacatc tgaagagcga atatggtctc gtcgagggcg
     1081 acacgttccg caccctgaca atccagaccg ccggcggcac gcgcaaatcg gttgaggccg
     1141 gcgtcgccgc tgtccgcgag atgctgccga tggcgaacaa ggctcagcgc gagacgatcc
     1201 cggcatcgga acttgtgctc gcgctgcagt gcggcggctc cgacggctat tccggcatca
     1261 cggccaatcc cgcgctcggt gccgccgtcg atctgctggt cgctcacggc ggtagcgcta
     1321 tcctgtcgga gacgccggag atctacggcg ccgaacattt gctgacaaga cgcgcgcgca
     1381 atcgcgaggt gggcgagaaa atcgtcgagc tgatccgctg gtgggaggac tacacagcgc
     1441 gtaacggcaa cgaaatgaat aacaatccgt cgccaggtaa taaagccggc ggcctgacga
     1501 caatcctcga gaagtcgctc ggcgcggtcg ccaagggcgg cacgacaccg gtcaacgagg
     1561 tctatcgcta cgccgaaccg gtgacggcga agggcttcgt ttacatggac acgccaggct
     1621 acgacccagt ctccgccacg ggccaggtcg cgggcggcgc caacgtgctc tgcttcacca
     1681 ccggacgcgg ctcggcttat ggctgcaagc cgacgccgtc gatcaagctg gcgaccaaca
     1741 gcgacatcta ccgccgcatg atcgacgaca tggatatcaa ctgcggcgac gtgctcgatg
     1801 gtgtaagcat cgaagccaaa ggccgcgaga tcttcaacat gatcctgcgc gtcgcctccg
     1861 gcgagcgctc gaaatcggag cagctgggct acggcggcgc ggagttcgtg ccctggcaga
     1921 tcggcgcaac gatgtaaatt tcggatgggt cattcaaatg aaaccaacat ttgacttcgc
     1981 gccgaccagc acccttcctc gcgacggcac cgcgggcgcg ctggctgggc gcgtctggcg
     2041 gccagagctt ggcggcccct ccgtcgtcgc gatccgcgaa gacggcgtct tcgacatcac
     2101 ctcgctctgc ccgacgacga gcgctctcgc agcagcgacg tcgccagccg cggtggtgcg
     2161 aggtgccgcg ggcgaacgca tcggcgatct cgccgccatc cttgagaaca cgccggcggt
     2221 gacgcgcgat cacaccaagc cgtggttgct tgcaccgatc gatctgcagg tgatcaaagc
     2281 cgccggcgtg acgtttccgg tttcgatgct cgaacgtgtg atagaggaga aggcgcgtgg
     2341 caatcccgca agcgcggccg caatccgtgc cgaggttgag cggctggtag gaggcgatct
     2401 cgcccagttg aagccaggtt ctcccgaagc gctgcatctg aaagaggtac tgatcaagca
     2461 agatgcctgg agtcagtatc tcgaagtcgg gattggaccc gacgccgaaa tcttcaccaa
     2521 ggcgccggtg ctatcagcgg tcggcagctt catggacggt gggctgcatc cggcatcgac
     2581 ctggaacaac ccggagcccg aggtcgtgct gatcgtcgcc gccgacggac gcatcaccgg
     2641 cgcgacactc ggcaacgacg tcaacctgcg cgacatcgaa gggcgctcgg cgctgttgct
     2701 gtcgaaagcc aaggataaca acgcgtcctg tgcgataggt ccgttcctcc gattcttcga
     2761 cgagactttc agcctagatg acgtgcgcag aatgacagta ggcctgatcg tgcgcggcac
     2821 ggacggtttt gtgctcgagg ggaagtcatc gatcgaaaag atcgcacgtg atccggaaga
     2881 tcttgtccga cagacgatcg gcgcaacgca tcagtaccct gacggcttcg cgctgttcct
     2941 tggtaccatg tttgcgccga ccggggatcg cgaggcgtcc ggccgcggct tcacccacaa
     3001 ggacggagac ctcgtgcaaa tcttggcacc gcaactcggt tcgctgttca acaagatgca
     3061 gtcttcggca gcttgcgagc cttggacttt cggcatcagc gcgctaatgg tcaatctcgc
     3121 cgcacgcggc ctgctcggca gtgcgcagcg gtcaagaccg atctaggcta gcgccttgga
     3181 agcagaaacg tagcgcggcg cgtatttcgg ctattctctt caatccctgg ctcgtgacac
     3241 catgcgtgcg gccaggaagc gccgggccgc gccgacgaat ggcggacgtt tgtcagaatg
     3301 agcagcagtc cgcttgtcag aatgaattgc ctggcagcgt ctaagttctt gaaaacattg
     3361 gagcagctga agggaatcga acccttgtca tcagcttgga agtcccttgc ggctgtcgtg
     3421 atttcaatgc ccgttctgac aaattgaccc ttttctgcgg ctttgaaccc aaacggttaa
     3481 ttcgcgttgt cagaacgtcg gccaagcgcg gccccggatc gtcagccgac aacacgggag
     3541 gcttggcagt tctgattgga gcgggactta ttccccatcg tcgcgtggtg aatgcgtagg
     3601 tggcggagga gtgctaccgg cgatgtcacc acgtcgtttt ccccagggaa gtggcctata
     3661 cattccaagc tgcatgagat gctaacccgc taccaggaag cattgacgtc gagctgtcac
     3721 cggtatgttc gagtttgagt ttccgagaga gacaggaggt ggaaatgcgc gtacgaacgg
     3781 atgcctgcaa atattcgctt gcgacgctta cggtgcgtga acgccagatt gtgcgcctgg
     3841 tatcaaaagg attgtcgaat agggaggtgg catctcggct gaatcttacc gaaggcacga
     3901 taaaagctca tttgcacaac atatatcaga agcttccaat cagcaaccga accgcgctcg
     3961 cggttttgag cgtttcctta tcatggcaac tcgaagccac caaggcgtcg gttgggtacc
     4021 caccgcccgc tcgatcttgg agtacggatt gaccggcaga gggggcggag tcgcgaggca
     4081 ctctccgcat gggaaggact gcagagcacc ctcgccgagt gaggtggctc cggaattttg
     4141 aacagggcgc taagtggaat ctcggcctga cggcaggcat gtttttgcct gcgaatcagg
     4201 agcgacgatg aagagacgag cccgccggaa ccacacagcg gccttcaagg cgaaagtggc
     4261 cttggctgcc ttgaagaatg atcgaacgat tgcgcaactt gctgagcagt tcgacgtgca
     4321 tcccaatcag atcacctcgt ggaaggagca gctattggaa ggggctactg acgtgtttga
     4381 acgcggtagc accgctaaat cgtcggcagc cgaagtcgac atcacctcgc tgcatgcaaa
     4441 aatcggcgag ctggtcctgg agaacgattt tctagaacgc gcgctcggca aggcgggatt
     4501 tccgagcgca aagcgatgat cgaccgtaac cacgatcttc cgctaatgaa aacaagcaac
     4561 gctcctcggc atcagccgag gcagcgtcta ctacgaaccg gtgccggtat cggccgcaga
     4621 ccttgcgctg atgcggcggc tcgacgagct gcatcttcag tcccctttcg caggttcgcg
     4681 tatgttgcgc ggcctgttgg ctgccgaggg gagcaagatc ggccggcgtc acgtcacaac
     4741 attgatgcgg aggatgggga tcgaagcgat ctatcgcagg cccaacacat cgaagcctgc
     4801 gccaggtcat cgcatctatc cgtatctgct gcgcggattg acgatcgatc gcccgaacca
     4861 tgtatgggcg agcgacatca cctacattcc gatggcacgt ggcttcgtct atcttgcggc
     4921 cgtgatggac tggttcgcgc gacgcatctt ggcctggcga ctgtcgaaca cgatggaggc
     4981 ttcgttctgc atcgatgccg tcgaggaagc tcttgcaaaa cacggctccc cgcaaatctt
     5041 caacaccgac cagggcagcc agttcaccag tgccgaattc accagcgtgc tgatcaacaa
     5101 cggcatctcg atcagcatgg acggcaaagg cgcatggcga gacaacgtct tcgtcgagcg
     5161 cttctggcga accgtcaagt acgaggaagt ctatctgcat gcctatgacg gcgtcggcga
     5221 agcacggcaa tagatcggtt gctaccttgc cttctacagc gcaagacgac ctcataccgc
     5281 ccttgacggc cgcacccccg atcaagccta cttccaccca ctgccgctcc gcacggcagc
     5341 ttaaccccgg ccgacgatgc acttagcaag gcggaaattt tgttcaaaga accggggcca
     5401 cctctgagct cgccggaact atatcggacg acataaccct tggcagtatg cttttgtgat
     5461 tgcgctcata agaagaatta cgtacacttt atgacagtat gtacgattca tgacattatc
     5521 gtcgtcacgc cggggatcat acggacatta ggtgaatcaa tctgacgccg agtatcttgg
     5581 aggtgggctc gtagggatga ctccaggcga agcaaaatgc gggcgctggg gctgcacaac
     5641 tcgacgaggg ctgcgatgga gcggttactt tttgaaaccg ttctggtcag cgcaaatgcg
     5701 ttgctcagag aagggttaac tcgaattcta ggcgcggctc actttcatat agtagcttcg
     5761 ggctctttcg ttgatgatga tgttctggat tcgctgccgg aggagccggc cattttgctc
     5821 gtcatcgatg ccaccgaaga tttcgattca gcaattggtc aaatcgaacc tttcaagcgg
     5881 cgttgtccaa ccgggcgggt cgccattctg gtgggccaac atcaacttca gcttccccag
     5941 atggtctcgg tatttcgggc aggcgccaat gcctgtttca cgagcttcac gacgtcggaa
     6001 gcattcatca gttctatcga gttggtgatg cgtggcgaaa ccattttacc gtcagcgata
     6061 ttgacctaca tgtttgacca tcaacgtggc cggaaccgcg ttaaacaaaa tggcccaaac
     6121 accgatgaag atggcaatgg gggtgataac ggagagaacg gccataacgg cggagatgat
     6181 gatttcgatg tgatcgaggc gatatcgccc gacgtcgtcg aaggtcatta ctcaccacac
     6241 ctctcggttc gacagatggc catcctgcaa tgtttgatcg agggcgactc caacaaagtc
     6301 atcgcacgca agatgaagat cgccgataca accgtaaagg ttcacgtcaa ggcgatcttg
     6361 cgcaagatac gcgtggacaa ccgtacgcag gcggcgattt gggcaatgcg caatggcccg
     6421 ttgatctcgg ccaatggtaa caggtcgttt aatggggagg atcagctccg acttcatcgg
     6481 tgaggcctat gtgactgcga ccgtcacggt ctgggacgag gatgtcacat caccgtccgg
     6541 ccgcaacggg cggtcaatcc gacggaaaaa cggcattatt cgaggtactc cccattcaat
     6601 tccccctcgg tcacaagcgt ccgcacaaaa agggcaggtc cttgaattca gccacaatca
     6661 gctgcagtca gattcctagg tcgatcaatt tctaagcaag aacaacttct gacatcgcgg
     6721 tgttagccaa ttacctcgca cctttggcgc tcagaacagc gggcacagtt tggagcagaa
     6781 tatagatgtc gagccacagt gaccagtttc ttatataaaa aaggtcctgc gctttttgaa
     6841 cctgcaaatc tccgttgctt cgtgacgata cctgccacat tcccgtaata cctggtttga
     6901 cgctcacccg gacggcccgg aattcgtcgt cgaagtaatt catatgatat gagggaaatg
     6961 gtctcggacc gacgagactc atgtcgccgc gaattacgtt caagagctgc ggcagctcgt
     7021 caaggctggt gcgccgcatg aagttgccga taatgggtag cacccgaggg tcttgggtaa
     7081 gcttgaagaa acgatgccat tcggcgttcg cctgcggatt gcggctcaga tgctctttca
     7141 gacgtcgctc ggcatccgcg tacatcgtcc gaagcttgaa cattcgcaac ggcgtggtgt
     7201 tgcgtccaac acgcaactga acataggccg ccgggcccgg atcgacgagc ttgatcgcca
     7261 gcgcgagcaa ggcaacgacc ggcgatacga gcagcgcgat agggaccgcg aagagtatat
     7321 cgataaagcg cttgagcaac tgattgtgtc gcagacagag gtcacgcctc atctcaatgc
     7381 cgatcgcgcc gccaagcatt cgagtgcgta accacaagct ttgaaaatcg tgcgcatcct
     7441 tcaccaggag gatccggcta gatgacatcc acgccggaaa gttggatgtg aacgctgaaa
     7501 gctcgtatgc ggaattaaag atcgcgaatt cgacatgccg ctggatgcga ctcgaatctg
     7561 cggttgcccc aagtaacggc agtggaagca ctgcgttctg caagtctctg tcgtgggagg
     7621 tctcaatgaa tccgatcggc cttaacccga gcgcaggctc acacatcagc agacgtgcca
     7681 gctttcggct attgccgc
//
LOCUS       DATILV010000018         3634 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2049486, whole genome shotgun sequence.
ACCESSION   DATILV010000018 DATILV010000000
VERSION     DATILV010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3634
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2049486"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..670)
                     /locus_tag="VLJ17_00285"
     CDS             complement(<1..670)
                     /locus_tag="VLJ17_00285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21444.1"
                     /translation="MATEFLSRLRAAAEHALRLTATATQPGANPEDPAPVAHSVLAHL
                     TSQTAELVCADESWRPTTPLIRVEIMASGPFDGLRGIRTAVNRLQANLVTAIRNGALE
                     LRLTEVRPACRHSTAWSREPVDPSASTTTWECFVDAFAADSDQGRTLFAQAFSESLRN
                     DVNHVIVFGDRFDDGLLFLGSAIQAFRQRGIRVSTFYLGDDFNSRNMYNLLAVSTGGI
                     FMHLS"
     gene            complement(613..1470)
                     /locus_tag="VLJ17_00290"
     CDS             complement(613..1470)
                     /locus_tag="VLJ17_00290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21445.1"
                     /translation="MTAASSNSSERDERVFIAAFGIMDSHQDGEAIAAFMRVRAILHR
                     HGSGFRRMLERSHEAELLNEQLGLQNAQLLRENTALRARDSRPASPSPVNAKDSFRTR
                     AMPEFRHWDIGLVGVIAILAKYGLLGFTASFTLTAAVLISAAFANWFSPMRFFAGVVF
                     GLMALGIVVFNQSASADAPALAVADPLATVTPATTGRAFANAMPPGPTFVDAAQPGQT
                     FADALSPRPTFAVTPPRQTFVEPRPRRGWGSHCGPYRLQPGFTCPRSTLWRRNFFPDY
                     VRPRNMRYG"
     gene            complement(1686..2900)
                     /locus_tag="VLJ17_00295"
     CDS             complement(1686..2900)
                     /locus_tag="VLJ17_00295"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HSV21446.1"
                     /translation="MPPSNFIAVPGGGEGNMPSSTKPSMCFVVDPEPGTRQVVHSVLK
                     GMKVEAESFDALPAMLERYAVRRPNLLFFDVTAGIGKVSRDMELLVAAKVDCPICIMS
                     GLNGLLTEEIRRNGVRRGLKVLPALAKPLRQQAIKNAAFELQQRPNRPRIRAGEVIEH
                     GWFDLWYQPRINLRSNMLAGVEALFRARHPELGTISADELLEGADDSDLLNLTTRVLG
                     RAMTDWKSFHKIGLPIEISINVPVCALKRLSLFSLLWEYGPSASDWPGITLELREDDI
                     IPNMPFAFKAITELRKQKIKLAIDSFGLSYEELSRHQELPFSEVKIDRSFVCNCDLDL
                     HNAGLCEIVVDFAHRYGAKVVAEGVETTGELKALRDMGCDYAQGYLLARPMSKADFVS
                     LLQQRTQKAKAT"
     gene            complement(2909..>3634)
                     /locus_tag="VLJ17_00300"
     CDS             complement(2909..>3634)
                     /locus_tag="VLJ17_00300"
                     /inference="COORDINATES: protein motif:HMM:NF021603.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2336 domain-containing protein"
                     /protein_id="HSV21447.1"
                     /translation="ISAREHIGYAVTDALVERGDRQVIRTVARNSGARFSSTGFGVLV
                     ERSQHDDILAESVGLRRDLPQDLFAKLFSEASEAVQQKLAAVNPAQVGDIRRVLSGIA
                     ADAVGAAEQPTRDYSAARIVVEALHESQALDESQVCSFAKLGSFEETAVALEMLCEFP
                     IDAIERVFQSENPELILILAKSNNFSWETTKHIMYLCPNSPYWSELKIETFQSHFDKL
                     QVATAQRVIRFYKVRQTASKVLS"
BASE COUNT          808 a         1014 c         1034 g          778 t
ORIGIN      
        1 cggacaaatg cataaagatt ccaccggtac tgacggcaag caaattgtac atattccggc
       61 tgttgaaatc gtcgccaaga taaaacgtag agacgcgaat cccgcgttgg cggaaagctt
      121 gtattgctga gcctaagaac aaaagaccgt catcgaagcg gtcgccgaac acgatcacat
      181 ggttgacatc attgcgcaga ctctcgctaa aggcctgcgc aaagagcgtt ctgccctggt
      241 cggaatcggc ggcgaacgcg tcgacaaaac actcccacgt cgtcgtgctg gcgctggggt
      301 cgacgggctc cctgctccac gccgtgctgt gccggcacgc aggccgaacc tctgtgaggc
      361 gtaattcaag cgcgccattg cggatagcgg tgacgaggtt ggcttgcaaa cgattgaccg
      421 cggttcttat accacgcagt ccgtcaaacg gaccgctcgc catgatttca acgcggatga
      481 gcggggtggt tggtcgccag ctttcgtcag cacacaccaa ctctgcggtc tgggatgtaa
      541 ggtgcgcaag caccgaatgt gcgacgggcg cgggatcctc cggattggct ccaggttgcg
      601 tcgcagttgc cgtcagccgt agcgcatgtt ccgcggccgc acgtagtctg gaaagaaatt
      661 ccgtcgccat agggtgctcc gtggacaggt aaaacccggc tgaaggcggt aggggccgca
      721 gtgggacccc cacccgcggc gcggccgcgg ttcgacgaag gtctggcgcg gcggcgttac
      781 ggcgaatgtc gggcggggcg atagcgcatc agcgaaagtc tggccgggct gtgctgcatc
      841 gacgaacgtc ggacccggcg gcatcgcatt ggcgaatgca cggccggtcg tggcaggcgt
      901 gacggttgca agagggtcgg caactgcgag cgctggtgcg tcggctgagg cagattgatt
      961 gaacacgaca attccaagcg ccatgagccc aaagacaaca ccggcaaaaa accgcatcgg
     1021 gctgaaccaa ttggcgaacg cagcgctgat caaaaccgcc gccgtcaacg tgaatgaagc
     1081 ggtaaagcca aggaggccgt atttggccaa gatggcgata acgccgacaa gaccgatgtc
     1141 ccaatgtctg aattccggca tcgctcgtgt gcggaaggag tctttggcgt tgaccggaga
     1201 tggcgaggcg gggcggctgt cgcgcgcacg gagcgcggta ttttcgcgaa gcaattgcgc
     1261 gttctgtagg ccgagctgtt cgttgagcag ctcggcctcg tgactgcgtt caagcatgcg
     1321 gcggaagcca ctgccgtggc ggtgaaggat ggcgcgcacc cgcataaacg cggctatcgc
     1381 ttcgccgtcc tgatgggaat ccatgatgcc aaacgccgca atgaaaaccc gttcgtcgcg
     1441 ttccgagcta ttggacgagg cggccgtcat agttgtaggt taattgactc acaccgccgg
     1501 ccgtgattca attgtttgtg actttgacgc ttcgagaatt cgacctatac tagtatgcgc
     1561 gacggtatcc ggagaaatac taggtatccg gagacggtgt gtggagggtt tggcggcatc
     1621 cagaaaccag ctggcgagtg ttcaagacgg aatcgaatta ccgttttgaa gcgccacgaa
     1681 ggtaatcagg tcgcttttgc cttttgagtt cgttgctgta gcaggctaac gaaatccgct
     1741 ttgctcattg gccgcgccag cagatagccc tgcgcataat cgcatcccat gtcccgcaga
     1801 gccttaagct cgcccgtggt ctctacgcct tcagcaacaa cctttgcccc atatcgatgc
     1861 gcgaagtcga cgacgatttc acataagccg gcattgtgca ggtcgaggtc gcaattacaa
     1921 acgaagctac gatcaatctt gacctcagaa aaaggcagct cttgatgcct agataattcc
     1981 tcgtaactta atccaaaact gtcgatggcg agcttaattt tctgctttct gagttcggtt
     2041 atcgctttga atgcaaacgg catgtttgga atgatgtcat cttcgcgcaa ttcaagggtg
     2101 atacccggcc aatccgatgc gcttgggccg tattcccaca aaaggctaaa tagtgatagc
     2161 cttttcaagg cgcaaaccgg cacgttgatg gaaatttcga tcggcaggcc gattttgtga
     2221 aatgatttcc aatccgtcat ggcgcggccg agcacgcgtg tcgttaaatt caataaatcc
     2281 gaatcatcgg cgccctccag caattcgtct gccgagatcg tcccgagttc tgggtgccgc
     2341 gcgcgaaaca atgcttccac gccggccaac atattcgatc ttaaattaat gcgcggctga
     2401 taccacagat cgaaccatcc gtgctcgata acctccccag cgcgtattcg cggcctgttt
     2461 gggcgttgct gcagttcaaa cgccgcgttc ttgatcgcct gctgacgcaa cggttttgca
     2521 agcgcgggaa gaaccttgag accgcgacgc accccgttgc ggcgaatttc ctccgtcaat
     2581 aacccattga ggccgctcat gatgcagatc ggacaatcga ccttcgctgc gaccaacaac
     2641 tccatgtcgc ggctaacttt gccgatgccg gccgttacat cgaagaaaag caggttggga
     2701 cgcctcactg catagcgctc aagcatcgcc ggcaatgcgt cgaaggattc cgcttcgacc
     2761 ttcattccct tcagcaccga atgtacgacc tgccgggtcc cgggttcggg gtcgacaaca
     2821 aagcacatcg agggttttgt agaactgggc atgttgccct caccacctcc gggcacggca
     2881 atgaaattcg acggcggcac gacctatcct aggaaagcac tttggatgcg gtttgccgca
     2941 ccttgtagaa tcgaatgacg cgctgtgcgg ttgcgacttg aagcttgtcg aaatgactct
     3001 gaaatgtctc aatcttcagc tccgaccaat agggggaatt cgggcacaga tacatgatgt
     3061 gctttgtggt ctcccatgag aaattgttcg atttagcgag aataaggatc aattctggat
     3121 tctcgctctg gaagacgcgt tcgatcgcat cgatcggaaa ttcacaaagc atctccaatg
     3181 cgacggccgt ttcttcgaaa cttcccaact tggcgaaact gcacacttga ctctcatcaa
     3241 gcgcttgtga ttcatgcagc gcttcaacga caattctcgc tgcggagtag tcgcgcgtcg
     3301 gctgttcggc ggcgccaacc gcgtccgcgg caattccgct caggacacgt ctgatgtcgc
     3361 cgacttgcgc cggattcacg gcggcaagtt tttgttggac ggcttcactc gcctcggaaa
     3421 acagctttgc aaataggtcc tgtggcaagt cccggcgcaa tcccacggat tccgcaagaa
     3481 tgtcgtcgtg ttgcgatcgc tcgacaagaa ccccaaatcc ggtgctagaa aatctggcgc
     3541 ctgaatttcg agctactgtg cgtatgacct gccgatcgcc gcgctcaacc agggcatccg
     3601 ttacggcgta accgatatgc tctctcgccg atat
//
LOCUS       DATILV010000019         1664 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2049715, whole genome shotgun sequence.
ACCESSION   DATILV010000019 DATILV010000000
VERSION     DATILV010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1664
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2049715"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(207..1379)
                     /locus_tag="VLJ17_00305"
     CDS             complement(207..1379)
                     /locus_tag="VLJ17_00305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21448.1"
                     /translation="MTAAREAARQTAYAMLTSGLSSEQAEEIESLLVAVDPSSDVPGT
                     EYEPGFRSRLEQFKTVAQKESPESLLTLLDQLKDIRLIGLTALPALGEVHPATRRLLA
                     GWGYRYNIWHLRRFTAPKRHAIVLCFLHAARAEITDSIIEMQDKLITSIHNKARKRYD
                     DVLRATEETRSRAVEVLEGMGTLVLNDAIPDHALRKHIFALLPSDDITRLVEGCRNLR
                     AGADGSPLGLIHHWYGYTRQYSPALLEKTPFQFAEGSPLGCAVTYVNHLNLDGKRQSF
                     ADAPVDFLPRRWVKHVVCKDAQGAIVLSRPHYEPALLTTLNERLKSGDVTVSHSRRWT
                     DFEEYLIPRPVWVAHRTAHYATLDLPLDVDAFLRRLNERLTTITAAVDQRVPQNKA"
     gene            complement(1389..>1664)
                     /locus_tag="VLJ17_00310"
     CDS             complement(1389..>1664)
                     /locus_tag="VLJ17_00310"
                     /inference="COORDINATES: protein motif:HMM:NF025079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4158 domain-containing protein"
                     /protein_id="HSV21449.1"
                     /translation="VPSAVIETIAWPLGVLPLPIDEYPHNDKTRWDHLERIRLHLGLV
                     PCDAGQRDRWLNHLTMLAHALPRSTALRQAACRWLTQEKIVRPGRTT"
BASE COUNT          328 a          472 c          514 g          350 t
ORIGIN      
        1 ggggcatacg tacaaatctt tgtgccatcc ttaacatgtc aaaatttctg tggttgacca
       61 ctagtgtcga tctcgatcag catgtcgact caatcaatct tttggagtct ggactcaagc
      121 aggtgtttca gcgtttgcac agcgtcgggc ttctccagag ccttgagggc agcgaggtgg
      181 cactcgcctt tcccagcatc aatcgttcag gccttgttct gcggcacgcg ctggtcaacg
      241 gccgccgtga tcgtcgtgag acgctcgttc aatcgcctca gaaaggcgtc gacatcaagc
      301 ggcaagtcga gggtcgcgta gtgcgcggtt cgatgcgcta cccacaccgg gcgggggatg
      361 agatactctt cgaaatcggt ccatcgccga gaatgggaga cggtcacatc acctgatttg
      421 aggcgctcat tcaacgtggt cagtaaggcc ggttcataat gcggtctcga gagaactatg
      481 gccccttgcg catccttgca aaccacgtgt ttgacccacc ggcggggcaa gaaatcgact
      541 ggcgcatcag cgaacgattg gcgctttcca tcgaggttca ggtggttcac ataggtgacc
      601 gcacacccga ggggagaacc ctcggcaaac tggaacgggg tcttctccag gagtgccggt
      661 gagtattggc gagtgtagcc gtaccagtga tggatgagac cgagcggaga gccatcagcc
      721 ccggcgcgta ggtttcggca accttccacc agtctggtga tatcgtcgct cgggagcagc
      781 gcgaaaatgt gcttccgcaa cgcgtgatcc gggatggcat cgttcagcac cagcgtgccc
      841 atcccctcca gcacttcgac agcacggctc ctggtttctt cggtcgctcg cagtacatcg
      901 tcatagcgtt tgcgcgcttt gttgtggata gaggtgatga gcttgtcttg catctcgata
      961 atgctgtcgg tgatctccgc acgcgccgcg tgcagaaaac agagcacgat ggcatgtcgc
     1021 ttgggcgcgg taaagcgacg gagatgccag atgttgtagc gataacccca gccagccaga
     1081 agccgccgcg tggcgggatg cacctcaccc agtgccggca acgcggtcag gccgatcaag
     1141 cgaatgtcct tgagctggtc gaggagcgtg aggagcgact ccggcgattc cttttgcgcc
     1201 actgtcttga actgctctag gcgtgaccgg aatcccggct cgtattctgt tcctgggaca
     1261 tctgacgagg ggtcgaccgc gaccaataac gattcgatct cttccgcctg ctctgaagat
     1321 aagccgctcg tcaacatcgc gtatgcggtt tgccgggcag cctcgcgagc ggcggtcatc
     1381 acgtcacgtc acgttgtgcg tccgggccgg acaattttct cttgcgtgag ccagcggcag
     1441 gccgcttgac ggagggcagt ggagcggggc aacgcgtgcg ccagcatggt gagatgattc
     1501 agccagcgat cccgctgacc ggcatcgcat ggcaccaaac cgagatgcag gcggatgcgc
     1561 tccaggtgat cccagcgggt cttgtcgttg tgcggatatt catcgatcgg gagcggtaac
     1621 acgccgagcg gccatgcgat cgtttcgatc acggccgaag ggac
//
LOCUS       DATILV010000020         2085 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_516559, whole genome shotgun sequence.
ACCESSION   DATILV010000020 DATILV010000000
VERSION     DATILV010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2085
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_516559"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..304
                     /locus_tag="VLJ17_00315"
     CDS             <1..304
                     /locus_tag="VLJ17_00315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008196838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="carboxyvinyl-carboxyphosphonate
                     phosphorylmutase"
                     /protein_id="HSV21450.1"
                     /translation="VPLMANMVEGGKTPLLAAPELEAIGFSLVIFPGGIVRALARTAS
                     EYYASLASHGSTEPFRPQMLDFDGINKLIGAEDMMALGKQYEPPTRPTAIKPTVRR"
     gene            419..1882
                     /locus_tag="VLJ17_00320"
     CDS             419..1882
                     /locus_tag="VLJ17_00320"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase family protein"
                     /protein_id="HSV21451.1"
                     /translation="MDKSFDLVIKNARVVRPNRTSVDCLDIAVKDGRIARVAPDIQAE
                     QAKEVFDARNFLAFPGCVDAHMHIGIYQPLAQDAVSESKAAATGGVTSSLNYIRTGQY
                     YLNRGGPYRDFMPEVLKQSDGRFWVDYSYHIAPIEAAHIDEMEHLALDYGITSFKIFM
                     FYGGYGLHGRSTNQNDFLMIGPEDRYDIAHFEFIMRGARRLMTEHPELADYISVSLHC
                     ELADILTAYTKIVEREGKLTGLHAYSAARPPHAEGLAIWIASYLANETNCLNINLLHL
                     SSRKAVDAAWTMQQVFPHIAFRREVTVGHLLLDTDCECAVQAKVNPPIRPREDVEALW
                     QAVLARKIDWIVSDHACCSNEQKWARDDPTNVWLAKSGFGGTEYLLSGILSEGSKRGM
                     SYNHMAELLSWKPAQRFGLLNKGDIASGFDADIALVDPHESFVVRAAHSESKQGYSPF
                     EGQQLTGRVKSTFLRGGLVYHDGKIIGPARGQYMRRP"
BASE COUNT          437 a          602 c          619 g          427 t
ORIGIN      
        1 cgtgccgttg atggcgaaca tggtcgaagg cggcaagacg ccgctattgg cggcgcccga
       61 attggaggcg atcggattct cgctcgtgat ctttcccggc gggattgtgc gcgcgctggc
      121 gcggacagcg agcgaatact atgcctcgct cgccagccac gggagcaccg agcctttccg
      181 cccgcaaatg ctcgatttcg atggaatcaa caagcttatt ggcgcggagg acatgatggc
      241 gctcggcaag caatacgaac cgcccactcg gccgaccgcc atcaagccga ctgtccgtcg
      301 ctgacatttc gcgacggcgg cggccgaggg tggctcgtgc ggatcgcgga tggaatggac
      361 gcacagctct gctgctatcg ccacgacggg cgcaaacgtc ggcaagaagg aatctcaaat
      421 ggataagtcc tttgatctcg tgatcaaaaa cgcccgagtt gtgcgcccca ataggacgtc
      481 ggtggattgc ctcgacatcg ctgtcaaaga tggacggatt gcgcgtgtcg ccccggacat
      541 ccaagcggaa caagccaaag aggtcttcga cgctaggaat tttctagcgt tccctggctg
      601 cgtcgatgct cacatgcaca ttggcatcta tcagccgttg gctcaggacg ccgtttcaga
      661 gagcaaagct gcggcaacgg gcggtgtaac gtcgagcctc aactacatcc gcaccgggca
      721 atactatctc aaccgtggcg gcccataccg cgacttcatg cccgaagtgc tcaagcagtc
      781 cgacggacga ttttgggtcg actacagcta tcacattgct ccgattgagg cggcgcatat
      841 tgacgagatg gaacatctcg ccctcgatta tggcatcact tcgttcaaga tattcatgtt
      901 ctatggtgga tacgggctgc acggacgatc gaccaaccag aatgacttcc tgatgattgg
      961 cccggaggac cgatacgaca tcgcgcattt cgaattcatc atgcgcggcg cccggcgtct
     1021 gatgaccgag catcccgagc ttgccgacta tatcagcgtc agccttcact gcgagcttgc
     1081 ggacattctc actgcctaca cgaagatcgt cgaacgcgag ggcaagctga ccgggctgca
     1141 tgcttacagt gccgcccgcc ctccgcacgc tgaagggctt gcgatctgga ttgcgtccta
     1201 tctggccaac gagaccaact gcctgaatat caatcttctg catctcagtt cgcgcaaggc
     1261 tgtggatgca gcgtggacga tgcagcaggt gtttccgcac attgcgttcc gccgcgaggt
     1321 gacggtgggt catcttttgc tggataccga ttgcgaatgc gctgttcaag ccaaggtcaa
     1381 cccgccgatc cggcctcggg aggacgtcga ggcgttatgg caagctgtac ttgcccgtaa
     1441 gatcgactgg atcgtcagcg accacgcctg ctgttcgaac gagcagaaat gggcgaggga
     1501 cgacccgacc aatgtatggc ttgccaaatc ggggttcggg ggaaccgagt accttctctc
     1561 cgggatcctg agcgaaggca gcaaacgggg catgtcttat aaccacatgg ctgagctatt
     1621 gagctggaag ccagcccagc gcttcggcct gcttaacaaa ggcgatatcg cttcaggctt
     1681 cgacgccgac attgctctcg tcgacccgca cgaaagcttt gtggttcgag cggcccactc
     1741 cgaatccaaa caaggatatt caccattcga ggggcagcaa ctcacgggcc gggtgaagag
     1801 cacttttctg cgcggcggcc tggtctacca tgatggcaag atcatcggac cggcccgtgg
     1861 tcaatacatg cggcggccgt gaaaggggtc gttcaggctc agccgatccc ttggtgtgaa
     1921 cgccgacttt ttcaatcagt tggtcgtgag gcgcgccgcg cagaagacaa cgccggaggc
     1981 atttggccaa cgtcctttcg tttggtcggt gtgcgacatg cagttggcgc ggcgcgttcc
     2041 ggccaagttg aatcggaaac gcgctctaga ttcttcagtt gatcg
//
LOCUS       DATILV010000021        10186 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4094634, whole genome shotgun sequence.
ACCESSION   DATILV010000021 DATILV010000000
VERSION     DATILV010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10186
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4094634"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..918)
                     /locus_tag="VLJ17_00325"
     CDS             complement(<1..918)
                     /locus_tag="VLJ17_00325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HSV21452.1"
                     /translation="MSLLLSSTVSLAQAPSPDGARLSGLEAQWKAKLNANTLSIVAGG
                     PGETYLDITHDLAVVLNNDSLRVLPIVGMDGAQNIRDVLYLKGVDAGITSSHILRYFA
                     STGELGAALDQRLTYITRMFQEEMHIVAGPGIKTLEDLTGKKASFSNPGSSTQITARD
                     VFGLLSIAVIEVNLSQADAIAKVKTGDIAAAVIISGKPAEMLSRISRDDNLHLLQVPY
                     TRPLQNNYVPAQLEWALYPNLIAEGQTVQTVAVDAVLITNNWLPTSERYHRIATFVES
                     FFSRFAELRKPPRHPKWLEVNLSAEFPGWQ"
     gene            complement(1382..2377)
                     /locus_tag="VLJ17_00330"
     CDS             complement(1382..2377)
                     /locus_tag="VLJ17_00330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21453.1"
                     /translation="MTEDFRDPSEEMKRLLRRIEEIDEAQQVQLPQAQSLEQFDFGER
                     TRPVSDSADQGKPALRRRGKQVGLRVWREFRRRRLIRTMTIAGIVAVVLAAILLDTEP
                     KVQPPLLATLNRINSEPAKQPHALATVALQKTSLQSDQVWPIGLPTAPGSDGTLVIKG
                     LAVGATLSVGRPLNANSWELKAKDLNGAFIIPPSGFAGTMDLTIDLSLGGTTVDEQRM
                     QVEWVGTTSAAPQVSTIRMEPGDITRLLTRGEALLASGEIAAARAMFKRLADNGEPRA
                     ALALAQTYEQSTLDRLGARGLAPEIEMARAWYERAKELGSTEAQRRLDALANRSK"
     gene            2897..5146
                     /locus_tag="VLJ17_00335"
     CDS             2897..5146
                     /locus_tag="VLJ17_00335"
                     /inference="COORDINATES: protein motif:HMM:NF012570.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dynamin family protein"
                     /protein_id="HSV21454.1"
                     /translation="MFGVGGMGGLAERQHILHSSVDAGYSDPGLRIGTSPARLREELI
                     RTGHLLREVLEPAGTGLVMDALRLLERQVCRVAVIGQIKAGKSSFINAFVQKPDLLPT
                     DVNPSTTAVTNLHFGSRQEPENSAVFEFFDTREWEQLANGGGKLRELTERLVPGFQPD
                     LLRRHVAVLKTRATSRLGPEFLDLLGRCHRFATLSPHIVRQYVCQGDSTGSIGANQTV
                     GRYSDITKSADIYLPAGPFDYPVTVIDTPGTNDPFLVRDEITRCSLESADLYMVVLTA
                     RQALAPSDVALLRILRGLHKERIIIFLNRIDELPDIAKDTETVVASVRLRLRHEFPGA
                     DIPLIPGSALWGNCAFAKKTRDFDHCVGRRAVNYLQDREFLQQGEFVHPAESDEHSSV
                     NFRRALLLASGLKPIYEALNEFLRASHYVNALRQVTACFSELARASDNVARQELKSLT
                     QDHTPLRNSATRTQDELSRLRGELQRLEEVSSIIDRSAALFYERQMRIVTTELSALRR
                     RLLDMVDARALKERDVLASKLLVGTALRTWTFDTQAMRRELADEFTDGFRRAEAQLLD
                     LQQETVPHLRQLLGVLVPNAGSAAESEIVRRPVPPPTLMPLGATIALDLDNSWWSQLW
                     RARPAPLQRGREVERLIKTEFRRAVEELVNACERNLTEHVVATTEWSFGTCSRIARSN
                     AQRHEQLLSHYKSLEQKIDGVADSQAVSEQQHYIRALNERLDRCEAVNRRLESIGRDM
                     VRDLLGARA"
     gene            5152..6072
                     /locus_tag="VLJ17_00340"
     CDS             5152..6072
                     /locus_tag="VLJ17_00340"
                     /inference="COORDINATES: protein motif:HMM:NF014036.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dynamin family protein"
                     /protein_id="HSV21455.1"
                     /translation="MGGTAIQGLLADLSEAQAKLRQRADCNPAFVEHADALAKLEARI
                     SVRPRVVVLGESNAGKTSLTNLLLDQTIVPESVIANTRRPLVLRYAETARLTGITCNG
                     KIDLTVSDAGPHQTSNLRSLEACIPNPRLAAFDLVDTPGLSTSAQLGALELRATDLVV
                     WCTPATQAWKESERRLWMSIPRRHHWDAILVATHRDHLRDDGEMRRVCARLATETAGC
                     FRSIVLVCASARGEARTGQQGDSGAAELDDRIEESLCAIAQRCHAAGYRLANRIVRKA
                     LKRMERPTAAAQVDGRVMRRFFGWRQGTTR"
     gene            6201..7196
                     /locus_tag="VLJ17_00345"
     CDS             6201..7196
                     /locus_tag="VLJ17_00345"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HSV21456.1"
                     /translation="MIRRILPTNMFVRIALFACALAPLLMAREINAQEALTVPAGLPD
                     WAFNIPDKIQPTAVRPEGIVRAPGSAKEYEWAKVAGNANPPDWFPDEHPAAPPSVTGG
                     PGVRFACGSCHLMSGQGHPESADIAGMPAEYLIRQMAYYKAGTRKDDARMGPIAKATA
                     DEHIRQAAEYFAALKPTMWVKVIETATPPKTFIATAGRHRQLHPDGGTEPIGRRILEI
                     PADPFRTEIRDPHSGFVAYVPPGSIAKGEALVKGGESAKTVQCAICHGEALKGLGEVP
                     RLAGLQPLYVARQLFDMQHGSSAGKAAELMKPVVANLSEDDIIAIASYLGSLPPQ"
     gene            complement(7501..>10186)
                     /locus_tag="VLJ17_00350"
     CDS             complement(7501..>10186)
                     /locus_tag="VLJ17_00350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018268011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0051139 - metal cation:proton antiporter
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CusA/CzcA family heavy metal efflux RND
                     transporter"
                     /protein_id="HSV21457.1"
                     /translation="GLRELSEIQRWMVVPAFKQVPGIADVTTFGGITTQFQLELDPAA
                     LTRFNISLKNVTDAIKANSANSGGSVMTRGELGYVIRSIGIVQTLDDLGNIVVTQRNG
                     TPIFVRDLGTLKLSNQERHGILGKDDRSDAVGGIVLLLRGENPSRVIDGIHQKVKELN
                     ARLKSQDVRIVAYLDRSDLVSATIDKVSHTIFEGIALVFIFLILFLGSPRSALIVAIT
                     IPMSMLIAFILMNLTKIPANLLSLGAIDFGIIVNAPIIVAEAVLRRREANPNQYLSEA
                     EALQAVHQIARPIFFATLIIITAYFPLFALQRVEAKLFLPMAYAVSYSVFGALLFSLT
                     VIPALAYLAYRKPHRAFRNPVLEWLEARYQGALRWCLFRLKIMYGLAVAATVAVVFLG
                     ATVGREFLPELDEGSIWLQVQLPTGISLDAASEMAKELRSAAREFPEVSYIVTQLGRN
                     DDGTDPWTPSHIEASVGLKPYASWPSGETKQDLIRRMSDRFLRLPGQTIGFSQPMIDG
                     VYDKIAGAHSQLVIKVYGENLDELRRIAGEIVDVLNATRGAAEVAIDQEPPLPQVVVQ
                     IDRAATARYGINVSDISDLIQTGIAGAAVSQVFIGDRQYSVTVRFPEVDRQNPEAIGN
                     LVLTSSTGALIPLSQVAGIKLQTGESTITHERNQRHLTVKLNYRDRDLSSLLAEAQKN
                     VTERVKFDENAYRIEWGGQFENQQRAQGRLALILLVMLGLMLILIYAEFALTRHALLI
                     LGVVPLATLGGLIALHVTDSTLNVASSVGFIALFGVAVENAIIMVSHLNRLRDSGAPL
                     YRAVLAGAGERLRPILMTASVATVGMLPAALATGIGSDVQRGLGIVIVGGLITTTLLT
                     VFMLPTFYFAFERRAVRRSSAVAPATADLPTIDQAAST"
BASE COUNT         2080 a         3010 c         3054 g         2042 t
ORIGIN      
        1 ctgccagcca gggaactctg cactcaggtt gacctccagc catttcgggt gcctcggcgg
       61 ctttctgagt tcggcaaatc gtgagaaaaa cgactccaca aacgttgcga tgcgatgata
      121 cctttcgctc gtcggcaacc aattgtttgt aataaggaca gcatcgaccg caaccgtctg
      181 aacagtctgc ccctcagcaa tcaaattcgg atagagagcc cactccagct gcgccggcac
      241 gtagttgttc tggagaggcc gcgtgtaagg aacttgcaat aagtgcagat tgtcatcacg
      301 ggagatgcgc gagagcatct cggcgggttt tccggagatt atgacggcgg cggcgatgtc
      361 cccggtcttg accttggcaa tcgcatctgc ctggctcagg ttgacttcga tgaccgcaat
      421 ggacagcaag ccgaacacat cgcgcgccgt gatttgcgtg ctggatcccg gattggaaaa
      481 actcgccttc ttgccggtga ggtcctcgag cgttttgatt cccggacctg ccacaatatg
      541 catctcttct tgaaacattc gggtgatata ggtcaaccgc tggtccaaag cggcgccgag
      601 ttcgcccgtg gaggcgaaat agcgcaatat gtgcgaagat gttatccctg cgtccactcc
      661 cttgaggtac aacacatcgc gaatattctg tgcgccatcc attccgacga tgggcaacac
      721 gcgcagactg tcgttgttga gaaccactgc gaggtcgtgg gtgatatcga ggtaggtttc
      781 gccagggcct ccagcgacga tcgaaagcgt attcgcgttg agcttggcct tccactgtgc
      841 ctccaggcct gagagacggg cgccgtcggg gctcggcgcc tgcgcaagcg aaacagtgct
      901 gcttagaagc aagctcatta gcgcaacggc gatcggaagg ggccgaacca gcgatggcgg
      961 agcgacttga atgcggtagc aaaaccgcat tgaggctcgc ttaaatattt gatatatcat
     1021 gattttacgc ccctggccat cgaacccatc tgctccaaga acgaaatcgt gggtgcgtcc
     1081 ctaaaaaatg ctatcactgg ttctgcgcct tttttttgtt cccattgtgg accggctagc
     1141 cgtcgcttaa ccgcacgctg gatcatgccg atggttgcgc ccgccgttac cagcgcggcg
     1201 gtatgatgcg cgagaaggcg cagaggacat ccgggcgagg cgtcgactta aacttagcgc
     1261 ttttcttgtc atccacctgc ttttagaggg ggcgtgcgcg catgttccgg caaagtgggc
     1321 gctggctcgc cgtcaagaac atccacaatg tcgcgcggcc cggggccgca aacgtgtcga
     1381 tttatttgct ccggttggcg agcgcgtcga ggcggcgttg cgcctcagtc gagccgagtt
     1441 ccttggccct ttcgtaccac gcccgcgcca tttcgatctc tggagcgagg ccccttgcac
     1501 ccaatcggtc gagggttgat tgctcgtagg tctgcgcaag tgccaaagcg gctcgtggct
     1561 cgccgttgtc ggccaaacgt ttgaacatgg ctctggctgc agcgatctcc ccgctggcca
     1621 ggagtgcctc tccacgcgtc agcaggcgag tgatgtcgcc aggctccatt cggatggtcg
     1681 agacttgcgg cgccgcagaa gtcgtcccca cccactcaac ctgcatacgc tgttcgtcga
     1741 cggtcgttcc gcccaagctg aggtcgatgg taagatccat tgtgccggcg aaaccactcg
     1801 gcggaatgat gaacgcgccg ttaaggtcct tggctttcag ctcccagctg tttgcgttca
     1861 atggccgacc gaccgagagc gttgctccca ccgcaagccc tttgataact aatgtgccat
     1921 cgcttccggg cgcggtaggc aggccgatcg gccagacctg atcgctttgt agagacgttt
     1981 tttgtaatgc tacggtggcg agcgcgtgtg gctgcttcgc gggttcggaa ttgatcctat
     2041 tgagcgtggc caacagaggc ggctgaactt tcggctcggt gtcgagcaag atcgcggcga
     2101 gaactacagc aacaatgccg gcgatcgtca ttgtacggat cagacgtcgt cttcgaaatt
     2161 ccctccacac tctcaggcct acttgtttgc cgcgccgccg caatgccggc ttgccctgat
     2221 cagccgaatc cgaaacgggg cgggttcgtt cgccaaagtc gaattgttcg agactttgtg
     2281 cttggggcaa ctgcacctgt tgcgcctcgt cgatctcttc gattcggcgc agcaaccgct
     2341 tcatttcctc gctcgggtcg cgaaaatctt cggtcacagc aggcctcgat tgcgcggctt
     2401 gcacagatgt ccaaaatttc gccctgtcgc tggcgcctgc atcacggctt cactctgcat
     2461 cggcgcgcgc tcaattgtgc ggctgtgccg attaccggac cccggatgtt gtggataacc
     2521 tgccacgctc atgacaagta aaaaccacaa cgagtccaat ttgagcatcc gctatcgtat
     2581 ttgaaatagg atttttttgg ggcgatatag ggtcaaaacg gagaaaacgt tgtggtttca
     2641 ccaaaagccg gggtaaacca ttttgacgaa gtcgaaaacc tgtggggcgc cgattgggcc
     2701 cccatgctca tacgtcggaa atagattgcg tccgcatcat ggcctccgcg cctgtcggat
     2761 ggccattcga tggatgtaca cgcgccgctt cccgcgggat tttggtcggg ctaaacctgc
     2821 cgccatgacg tgcaatttag ccataattcg ttgtcaggta gcaacgacct tatgactttg
     2881 gaacaagagc ccactcttgt tcggggtagg cggtatgggg ggattagccg aacgccagca
     2941 cattctccac tcctcagtgg acgccgggta ttccgatccg ggactaagaa ttggaacatc
     3001 acctgcacga ctgagggagg agctcatccg caccggccac ctcctgcgcg aggttctgga
     3061 gccggcaggc accggtctcg tgatggatgc gctgcgcctg ctggagcgcc aagtctgccg
     3121 cgtcgcggtg atcggacaaa tcaaggccgg caagagctcg ttcatcaacg ctttcgtcca
     3181 aaaacccgac ttgctcccga ccgacgtcaa tccgtcgacg accgccgtta cgaatctgca
     3241 ctttggctcc cggcaggaac cggaaaattc tgctgtattc gagttctttg acacccgcga
     3301 gtgggagcag ttggcgaatg gcggcggcaa gctcagagag ctgaccgagc ggctggttcc
     3361 aggattccag cccgatctgc tccgtcgaca cgtggctgtg ctaaagacgc gggcgacctc
     3421 gcgccttgga ccggagttcc tagatttgtt ggggcgatgt catcgcttcg cgacgctgtc
     3481 gccgcacatc gtgcgacaat acgtctgcca aggcgattcc acgggttcca tcggcgcaaa
     3541 ccaaacagtc ggccgttatt ccgatatcac gaagtcggca gatatctact tgccagcggg
     3601 ccccttcgat tatccggtta ctgtgatcga cactcctggc acgaacgatc cttttctcgt
     3661 gcgtgacgag atcacgcgtt gcagcctcga atcggccgat ttgtacatgg tggtgctcac
     3721 ggcccggcag gctctggcac cttccgatgt cgcgctgttg cgcattctgc gggggctcca
     3781 caaggagcgg atcattatct ttctcaaccg catcgacgaa ttgcccgaca tcgccaagga
     3841 caccgaaacg gtcgtcgcat cggtgcgact gcggctgcgc cacgaattcc ccggcgccga
     3901 catcccactg atccccggaa gcgctctgtg gggaaattgt gcgtttgcaa aaaagacgcg
     3961 ggatttcgac cattgcgtcg ggcgccgcgc ggtcaactac ctccaggata gggagttttt
     4021 gcagcaaggg gagttcgtcc atccggcaga aagcgacgaa cattcgagcg tcaatttccg
     4081 tcgcgcgctg ctcttggctt cggggctcaa gccgatctac gaggcgctaa acgagttcct
     4141 gcgcgccagc cactatgtca atgcgttgcg ccaggtgacg gcttgctttt ctgaacttgc
     4201 gcgcgccagc gacaacgttg cgcgtcaaga attgaaatct ctcacgcaag accacacccc
     4261 cttgcgcaat agcgccacgc gcacacaaga tgaattgtcg cgcctgcgcg gtgaattgca
     4321 gcgtctggag gaggtgtcat ccattatcga caggtccgcg gcgctgttct atgagcggca
     4381 gatgcgcatc gtcaccaccg agctctcggc gctgcgccgt cgtctgctcg acatggtaga
     4441 tgcccgtgcc ttgaaggagc gggatgtgct cgccagcaaa ttgttggttg gcacggcgtt
     4501 gcggacttgg accttcgaca cgcaggcaat gcggcgcgaa ctcgcggacg agttcaccga
     4561 tggttttcga cgcgccgagg ctcagctcct cgaccttcag caggagacag tgccgcacct
     4621 gcgccaattg ctgggggtgc tggtgccaaa cgccggctcc gcggcagagt ccgagatcgt
     4681 gcgccgcccg gtgccgcctc cgacgttgat gccgcttggc gccacgatcg cgctcgatct
     4741 tgacaattcc tggtggtcgc agctgtggcg ggcgcggccg gcaccgctgc agcgaggccg
     4801 cgaggtcgag cggctcatca agacggaatt ccgtcgcgcc gtagaggaac tcgtcaatgc
     4861 atgcgagcga aacctcaccg agcatgtcgt tgccaccaca gagtggtcgt tcggcacttg
     4921 ttcgcgcatc gcgcggtcga acgctcagcg ccacgagcag ttgctatcgc actacaagag
     4981 cctcgaacag aagatcgacg gggttgccga ttcacaggcc gtgtccgagc aacagcacta
     5041 catcagagca ctaaatgaac gtctggatag gtgcgaggcg gtgaaccgcc ggctggaatc
     5101 gatcggtcgc gacatggtgc gggacttgct tggcgctcgg gcatagccgt cgtggggggg
     5161 actgcaatac aagggctact ggcggacctg agcgaggctc aagcaaagct acgccagcgc
     5221 gccgattgca acccagcctt tgtcgagcat gccgatgctc tggcaaagct ggaggcgcgg
     5281 atatctgtcc ggcctcgcgt cgtcgtcctc ggcgagagca acgccggaaa gacgtcgctg
     5341 accaatctgc tgcttgacca aaccatagtg ccggagagcg tcattgccaa tacgcgccgg
     5401 ccgttggttc tgcgttacgc cgagacggcc cgcctgaccg gcatcacctg caacgggaag
     5461 atcgatctta cggtcagcga cgccgggccg catcaaacct cgaacttgag gagtctcgaa
     5521 gcctgtatac ccaatcccag attggccgca ttcgatctgg tcgatacgcc aggactttcg
     5581 acgtcggcgc aattgggtgc cctggagctt cgggcgaccg atctcgtggt ttggtgcact
     5641 cctgccactc aggcctggaa ggagagcgaa cgccgcctgt ggatgtcgat ccctcgcaga
     5701 catcattggg acgccatact ggtcgcgacc cacagggatc atctgcgaga tgacggtgaa
     5761 atgcgcagag tttgcgcccg gctcgccacc gagacagcgg gctgcttccg gtcaattgta
     5821 ctcgtttgcg cctctgcacg gggcgaagcc cgaaccggcc aacaggggga tagcggagcg
     5881 gccgaactcg acgatcggat agaggagagc ctctgcgcga tcgcacagcg ctgccacgct
     5941 gccggatacc ggctagcaaa ccgcattgtc cgcaaagcac tcaagcgcat ggagcggccg
     6001 actgcggcag cacaagtcga cggccgtgtc atgcggcggt tttttggctg gcggcagggt
     6061 accacgaggt gacgtcacaa agcagttcgc cgaagagtag attcggatcg tcctggtggg
     6121 tcttgcggct ttgatagacc tcgttatcct ccccgggata actgccgacc ttcgtccgag
     6181 aaggcgagag gagacccgcc gtgatccgcc gaattctccc gacaaacatg ttcgtccgca
     6241 tcgccctctt tgcatgcgcc ctcgctccgc tcctcatggc acgggagatc aacgcgcagg
     6301 aagcgcttac agtccccgcg ggacttcccg attgggcgtt caacatcccc gacaagatcc
     6361 agcctaccgc tgtgcgcccg gagggcatcg tgagggcgcc gggcagcgcg aaggaatacg
     6421 agtgggccaa ggtcgccggg aatgcgaatc cgccggactg gtttcctgat gaacaccccg
     6481 ccgcaccgcc gtcggtaacg ggtggccccg gggtcagatt tgcctgtggc tcgtgccatc
     6541 tgatgtcggg ccagggccat ccagaatccg ccgacatcgc cggcatgccc gccgagtact
     6601 tgattcggca gatggcgtat tacaaggcgg gcacgcgcaa ggacgacgca cgcatggggc
     6661 ccatcgcgaa ggccacggcg gacgagcaca tccgccaagc cgccgaatac tttgccgcgt
     6721 tgaagccgac catgtgggtg aaggttatcg agaccgccac gccgcccaag acgttcatcg
     6781 ccaccgcggg ccgtcatcgt cagctccatc ccgatggagg caccgagccg attggacgcc
     6841 gtatcctcga aatccccgca gatccgttcc gcacggaaat ccgggatccg cattccggtt
     6901 tcgtcgcata tgtgccacct ggcagcatcg cgaaaggcga agcgttggtc aaaggcggag
     6961 agtccgcaaa gacagtgcaa tgcgcgatct gtcacggcga ggcgctcaaa ggcctcggcg
     7021 aagtcccgcg gctcgcggga ctgcaaccgc tgtatgtcgc gcggcagctc ttcgatatgc
     7081 aacatggctc gagcgccggg aaagccgcag agttgatgaa gcccgtcgtc gccaatctgt
     7141 cggaagacga catcatcgcg atcgcctcat atctcggctc actgcctccg caataaggat
     7201 cacgccgcaa gctgccgccc atttcgggac tgaccgcctc ttcttgaacc aagcggcttg
     7261 caccaagccc gtctaggaaa gcggccattc tgctttcgca tgcgagccgt cgatgaggcc
     7321 tgtgaacagc cgcagcgaca cagcgcctgg ttgtgttacg gtgcgaccgg ctcggagaat
     7381 ttcgagggtg cgtgtcacgc ggaccattgc gttgtgataa aaattcgagc ggaccgcgcc
     7441 agtcaaacgc aggggtgtcg tgggcgacgc tgtcggaatt gcgccacccg cgtcgaggcg
     7501 ctacgtcgag gccgcctggt caattgtggg caaatccgcg gtcgcaggag ccacggcgga
     7561 cgaacgccgt accgcgcggc gttcgaatgc gaagtagaat gtaggtaaca tgaaaacggt
     7621 gagtagcgtg gtcgtgatga ggccgccaac aatcacgatt ccgagtccgc gctgcacgtc
     7681 gctgccgata cccgtcgcca aggccgctgg cagcatgccc actgttgcga cgctggcggt
     7741 cataaggatc ggccgcaggc gctcgccggc gccggccagc acggctctgt acaagggagc
     7801 tccgctgtcg cgaagacggt tgaggtgcga gaccatgatg atggcattct caacagcaac
     7861 gccgaacagc gcaatgaagc cgaccgaaga agcaacattg agcgtggaat cggtgacgtg
     7921 gagcgcgatc aaacctccaa gcgtggccag ggggacaacg ccgagaatta gtaatgcatg
     7981 acgtgtgagc gcgaactcgg cgtagatcag aatgagcatg aggcccagca tcaccaggag
     8041 aatcaatgcg aggcgaccct gcgcccgctg ctggttttcg aattgcccac cccattcgat
     8101 gcgataggca ttttcatcaa atttgacccg ttcagtcaca ttcttctggg cttccgcaag
     8161 caaggaagag agatcgcgat cgcgatagtt gagttttact gtgagatgcc gttgatttcg
     8221 ctcgtgcgta atggtgcttt cgccggtctg cagtttgatg ccggcaactt gtgacagagg
     8281 gatgagtgcg ccggtcgagg acgtcagcac caagttgccg atggcttcgg ggttttgccg
     8341 atccacttcc gggaaacgaa ccgtaacact gtattgccga tcgccgatga acacctggct
     8401 cacagccgcg cccgcaatac cagtctggat caggtcggaa atatcgctga cattgatgcc
     8461 atatcgagcg gtggccgcac gatcgatctg cacgacgacc tgcggcaatg gcggttcttg
     8521 atcgatcgcg acttccgctg cgcctcgcgt ggcgttgagg acatcgacga tttcgcccgc
     8581 gattcgccgc agctcgtcaa ggttctcgcc gtaaaccttg atgacgagtt gactatgcgc
     8641 cccagcaatc ttgtcgtata ccccatcgat catcggctga gaaaatccga tagtttgtcc
     8701 cggcagtcgg aggaaccgat cgctcatgcg gcggatcaga tcttgtttgg tctcgcctga
     8761 tggccagctg gcgtacggtt tgagtccaac gctggcttcg atgtgcgaag gagtccatgg
     8821 atcagtaccg tcgtcatttc ggccgagctg ggtgacaatg taggacactt cggggaattc
     8881 gcgcgcagcg ctacgcaatt cctttgccat ctcacttgcg gcgtcgaggg agatgccggt
     8941 cggcaactgc acctggagcc agatcgagcc ttcgtcaagt tcaggaagga attcacgccc
     9001 gaccgttgcg ccaagaaaca cgactgcgac cgtcgccgcc acggccagac cgtacatgat
     9061 cttcaggcga aagagacacc agcgcagcgc gccctgatac cgcgcttcca gccattccag
     9121 caccggattg cggaaagcgc ggtgaggctt gcgataggcc agataggcga gcgccggaat
     9181 cactgtcaat gagaacaata acgcgccaaa taccgaatat gaaaccgcgt aggccatcgg
     9241 caagaacaac ttcgcctcga cgcgctgaag tgcaaataaa ggaaaatagg cggtaatgat
     9301 gatcagggtc gcgaagaata tcggcctcgc gatctgatgg acggcttgaa gtgcttcagc
     9361 ttccgaaaga tattggttgg ggttcgcttc gcgacggcgc agcaccgcct cggccacgat
     9421 gatgggcgcg ttgacaataa ttccgaaatc aatggcgcca agcgacagca aattggccgg
     9481 gatcttcgtc agattcatca ggataaaggc gatcagcatc gacatcggga tcgtaatggc
     9541 gacgatcagc gcgctgcgcg ggctgcctaa gaacaagatg aggaaaatga agacaagagc
     9601 aattccctcg aagatcgtgt gagacacctt gtcgatggtg gcgctgacga gatccgagcg
     9661 atcgagatag gcaacgatcc gaacgtcctg ggacttcaac cgagcattta gctccttaac
     9721 cttctggtga atcccgtcga tgacccgcga cgggttctcg ccgcgcaaca ggagcacaat
     9781 gccgccgaca gcatcgctcc tgtcatcctt gccgagtatt ccatggcgct cttggttgct
     9841 cagcttcaat gtgcccaggt cgcgcacgaa gatcggtgtg ccgttgcgct gcgtgacaac
     9901 gatattgcca aggtcgtcga gcgtctgcac gatgcctatg ctgcgaatga catagcccag
     9961 ttcgccccgg gtcatgacac tgccgccaga gttcgcactg ttcgccttga tggcgtcagt
    10021 gacattcttc agcgagatgt tgaagcgggt gagcgctgcc ggatcgagct ccagttggaa
    10081 ttgcgtggtg atgccgccga acgttgtgac gtcggcgatg cccggcacct gcttgaacgc
    10141 cgggaccacc atccaccgct ggatttcaga aagctcgcgc aaacct
//
LOCUS       DATILV010000022         3088 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1539494, whole genome shotgun sequence.
ACCESSION   DATILV010000022 DATILV010000000
VERSION     DATILV010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3088
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1539494"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(95..625)
                     /locus_tag="VLJ17_00355"
     CDS             complement(95..625)
                     /locus_tag="VLJ17_00355"
                     /EC_number="1.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013756.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016646 - oxidoreductase activity, acting
                     on the CH-NH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HSV21458.1"
                     /translation="MMGTVIPRPIALVTSLSRDGVLNAAPFSQFVVISVTPPLLGFVA
                     HEGEHGLKDKVRNVIESGEYVINTVAEPTAKQVQICSENFPPSVSEVAEVGFHTWPSN
                     FVRPDRIAESSVHFECRLYRVFEFGHAHLIVGEIIAVHCADGMVSGHRVSHKAMNSLG
                     RIAGRSYCRTGDKFDV"
     gene            complement(1636..2643)
                     /locus_tag="VLJ17_00360"
     CDS             complement(1636..2643)
                     /locus_tag="VLJ17_00360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007763454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase family protein"
                     /protein_id="HSV21459.1"
                     /translation="MNLAILDDYQHVALKMADWSSIARQCQIDVIDKPLRGVSEAAEA
                     LKPYDIVCMLRERTAAPRALIEKLPNLKLLAITGPRHRTLDLAAATDHGICVCNSPVP
                     DDTQLGTPELAIGLMFAVTRRIPQEDKRLRQGLWQGSVGIQLHRRTLGIVGLGGIGRN
                     VARIAQALNMQVIAWSQNLTAEAAAAAGVTYVAKEELFKRADVVTLHLVLGDRNRGIV
                     GPRELALMKPTSFIINTARAALIDEQALVHALQNRSIAGAALDVFWEEPIPTDHPLLT
                     LDNVVVTPHLGYVVEESYRAFYEGLVETVSAFLAGKLIRLSNPEVVPRSGISVENPRT
                     V"
BASE COUNT          627 a          905 c          906 g          650 t
ORIGIN      
        1 aacacggatg cccgccagcg cagagggtac cgcaccgggc gcgaaagagg accatggcgt
       61 agatgccgcg ccggcgcccg catcgaccga agcgtcatac atcgaacttg tctccagttc
      121 ggcaatagct gcgaccggca atacgcccca gcgaattcat cgctttgtgg ctcacgcgat
      181 gcccagaaac catcccgtct gcgcaatgta cggcgatgat ttccccgacg atcagatgcg
      241 cgtgaccaaa ctcgaagacc cgatacaggc gacattcgaa atgaacggag gactctgcaa
      301 tccgatcagg ccgcacgaag ttcgagggcc aggtatggaa gccaacctcg gcaacttcgc
      361 tgaccgatgg cggaaagttt tcagagcaaa tttgaacttg cttcgccgtc ggttcggcga
      421 ccgtgttgat cacgtattcg ccggattcga taacgttgcg gaccttatcc ttcaggccat
      481 gctcgccctc atgggccacg aagccgagca gcggcggcgt cacggagatg acgacgaatt
      541 ggctgaaagg cgctgcgttc aggacgccgt ctcggctcaa tgaggtgacc agcgcgatgg
      601 ggcgcggaat gaccgtgccc atcatgaatt tgtagcgatc ggcctcgtcg aattgggaaa
      661 tgtcgagctg ggaatatgcc gcgtgaacca tgatcggcat ttctcggttt gttgacccgg
      721 tgccgacgat atgaggcgcc tcgtcgcccc aacaatgacg aagagtttgt ttctgatatt
      781 cagtttccgg acccgtccat gtgccgcata acagaaaata agtttttgat ttgttggccg
      841 tcgcgatcgc tcgatatcct cccgtcgcgt ttgcgacgag agctgcggcg gactgcgcga
      901 caaaccaaat cgagaccata caacagtgtg gggagctcac gttgcggcgg ccattggccc
      961 gtgtcgtttg ccgggcggaa gtcgggatag attctccgga atgagccttc cagactgccg
     1021 tcgagaaccg cgacgcgcac atcgaggaac ggctgcacgg tccatctctt ccagcgcatc
     1081 tgttgcttct tgttcatacg ccgggcgata attactatcg ctatgatcat catggtggct
     1141 ggtctatctg tacctgccgg tcggcgatac cggtctgctg ctcctcggga tccctctgaa
     1201 caccgcgatc ctaatgaagc acgcgcgcct tcgacctcct actggtcctg ctgcagtccg
     1261 acggcgcact ggccacaaag gggagcttct caaccgggtg tggccgggca ttgttgagaa
     1321 acggtcattg gaggcgatcg ggaagctcgc cgcctcactc aataacttcg tcggcggggg
     1381 cgagcagcaa ttgaggtagg gtgagaccga gtgtattcgc ggtttccaga tttatcacga
     1441 gttcgaattt ccgcgcctga tagggcagcc gtgcattggc ggcttgtcgg caagcgattg
     1501 atcgctttac cccgcgcggc acggccccgg acctgtcctg actcgccgtg cggcgaactt
     1561 ctcgatcaga cattcgtcca aaacttggac gcgctttggg agcggtctct cgctaatcgt
     1621 cagccacgtg ccgcgtcata cggttcgtgg attttctaca ctgataccgc tgcgcgggac
     1681 gacctccgga tttgagaggc gaattagctt gccggccagg aacgctgaaa ccgtctccac
     1741 taatccctcg tagaaagcgc ggtacgattc ctcgaccaca tatcccaaat gcggcgtgac
     1801 cacgacgtta tcaagcgtca gcagtgggtg atcagttgga atcggctctt cccagaagac
     1861 atccagagcc gcgccggcga tgctgcgatt ttgcaaggca tgaacaagag cttgctcgtc
     1921 tatcaaggcg gcgcgtgcgg tatttatgat gaacgaggtc ggcttcatca gggcaagctc
     1981 gcgtggtccg acaatgccgc gatttctatc gcccaatacg agatgtaacg tgacgacgtc
     2041 cgcccgtttg aagagctctt ccttcgcaac gtaggtgacg ccagccgctg ccgcggcttc
     2101 ggcagttagg ttctggctcc aggcgatcac ctgcatgttc agagcttgcg caatgcgagc
     2161 gacgtttcgg ccgattccgc cgagaccaac gatgccgagc gtgcgtcgat gcaattgaat
     2221 cccgacgcta ccttgccaga ggccttggcg caggcgctta tcctcctgtg gaatccggcg
     2281 tgtcacggcg aacatgagac cgatggcaag ttctggtgta ccgagctgcg tatcatccgg
     2341 aacgggtgaa ttgcagacgc atatgccatg gtctgttgca gcggcgaggt cgagcgtgcg
     2401 gtgtcttgga ccggtgatcg caagcaattt cagattcggc agtttttcaa tcagcgcgcg
     2461 cggcgccgcg gtgcgctcgc ggagcatgca aacgatgtcg tacggcttta gcgcttccgc
     2521 ggcctcgctc acgccgcgca gcggcttgtc gatgacatcg atctggcatt gtcgcgcgat
     2581 tgaagaccaa tcggccattt tcaatgccac atgctggtag tcgtcgagaa ttgccagatt
     2641 catctctttc gcccgcaccg aaaagcctgc acccattgac ctgggatcgt cagttccggc
     2701 tccgtactaa gccttatatc gtgcggccgc atgcgcctgc ctaggtcccg cgacagtgcg
     2761 acccgcgctg attgaaatgc ctcccattgc ccataagaag gaagagacgg cagagttacg
     2821 agttcgcgtc gatcgaaacc cattaaggct gggtccacca actcctccac cgccatgacg
     2881 acccgcagcg agccgacgtc acgcccggag cgctcccaga tttccgtgcg cgtagcgctc
     2941 ggcagaacga cttggacgta taggcctttg ggaagaagga cagcccgaat tcagcctgcc
     3001 cgtttaggct cgttgttatt agccgagatc gcagctgggc agccacgatg tcgtacactg
     3061 aacttggcgg actggtcctc gggaccgg
//
LOCUS       DATILV010000023         3294 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4350752, whole genome shotgun sequence.
ACCESSION   DATILV010000023 DATILV010000000
VERSION     DATILV010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3294
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4350752"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..255)
                     /locus_tag="VLJ17_00365"
     CDS             complement(<1..255)
                     /locus_tag="VLJ17_00365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017271433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01459 family HAD-type hydrolase"
                     /protein_id="HSV21460.1"
                     /translation="MSFFLLDSFSTVAPRYDVVLCDIWGVVHNGIAAHTAACDALMRY
                     RAGGGTVVLITNAPRPSPWVVHQLDRLGVPAGAYDDVMTSG"
     gene            complement(374..772)
                     /locus_tag="VLJ17_00370"
     CDS             complement(374..772)
                     /locus_tag="VLJ17_00370"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019863851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HSV21461.1"
                     /translation="MPKQQITSVKIRQPSGHFSQATMIEARGRLVFISGMTARRPDGT
                     VAGIGDIEAQTRQVCENLKAAIEAAGGTMDDICRVDVYVRNMEHFDQIHKVRREYFTA
                     PAPASTMVEVTKMTSPDYLIEINAIAVVAV"
     gene            complement(932..1330)
                     /locus_tag="VLJ17_00375"
     CDS             complement(932..1330)
                     /locus_tag="VLJ17_00375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019863853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSV21462.1"
                     /translation="MDLPTGAPKLEEILIDSSAMPWREKSLTGVSEKMLWRNPETGAS
                     VALIRFARGAGIPSPHYHPSNQFMICLSGRYEYTQTGIVLTAGSFYCNPKGNVHGPTI
                     AHEETIVVEIYDGPHYAVKPDWYTNEEDAR"
     gene            1618..1872
                     /locus_tag="VLJ17_00380"
     CDS             1618..1872
                     /locus_tag="VLJ17_00380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21463.1"
                     /translation="MRAGVALSIILLSIAAMAGPKEDVAAATLTWARAFGEDGVAALC
                     RRWGTLSPTVRTDRTAFAELFRDGLFKGSSRPQSIVSATN"
     gene            complement(2073..2567)
                     /locus_tag="VLJ17_00385"
     CDS             complement(2073..2567)
                     /locus_tag="VLJ17_00385"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSV21464.1"
                     /translation="MTPTLTNLAFLICLAIVVAAPARADDYAFGRRLFLDKAQCLYCH
                     GWAGDGAGEPQSNGGANLRVSPLKRDQLIEVIGCGVPGKAMPHFDEQAYTDKRCYGVT
                     EAELGRDTPALPPGATLNRREIEAVADYLLAKVIGRGAITREECEEAYGDGARQCARY
                     PAKS"
     gene            complement(2644..>3294)
                     /locus_tag="VLJ17_00390"
     CDS             complement(2644..>3294)
                     /locus_tag="VLJ17_00390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent dehydrogenase, methanol/ethanol
                     family"
                     /protein_id="HSV21465.1"
                     /translation="VQYAQKVNWTKGLDPKTGKPLDYDPGKDVQTYNHDWKSVTDTIK
                     NSCPDVHGGTNFWPPSYSDKTKLLYIGASEGCADITPDPTAHVRGKFGGGGYVNNERI
                     VGSLTVVDPLTAEVKARKELPYPDLSGVLTTAGGIVVTAMLDGTILAFDDQTLDKLWE
                     VNVGTGFVAPPMTYAVNGKQYIAIASGIGPVGKAKIARSPELKTQGNATMLFVFGL"
BASE COUNT          622 a          991 c         1031 g          650 t
ORIGIN      
        1 gcctgacgtc atcacgtcgt cgtaggcgcc cgccgggacg ccaagccgat cgagctgatg
       61 aaccacccaa ggcgacgggc gcggcgcatt ggtgatgaga actacggtgc cgccaccggc
      121 gcgataacgc ataagtgcat cgcaggccgc cgtgtgggcc gcgatcccat tatgaactac
      181 gccccatatg tcgcacagca caacgtcgta gcgcggcgca acggtcgaaa agctatcgag
      241 aagaaagaag gacatcgagt ctgagattag ccattaagga tcagggtggg atcaggcggc
      301 acttagagca cgttccgacg aaatcgaaca atcttcatgc ggacgttgga cgaatgtcgg
      361 cgggactccg ccgtcagacc gccaccaccg caatagcgtt aatctcgatc agataatccg
      421 gcgacgtcat cttcgtgacc tcgaccatgg tggaggccgg ggccggggcc gtaaagtatt
      481 cgcggcgcac tttgtggatc tggtcgaaat gctccatgtt gcgcacataa acgtcgaccc
      541 ggcagatgtc gtccatggtg ccgcccgccg cctcaatggc ggccttgagg ttctcgcaca
      601 cctgtcgggt ctgcgcctcg atatcgccga tgcctgcgac ggtgccgtcg gggcggcgcg
      661 ccgtcatgcc ggaaatgaac accagccgac cgcgcgcctc gatcattgtg gcttgggaaa
      721 aatggccgct gggctggcgg atttttaccg acgtgatttg ctgcttgggc atggttttcc
      781 tcggcgtcag agcatttccg ctctccgaaa cctacgcaaa gctgagctaa gctgcccctc
      841 ccccaccccg tcgcttcccc cacaagggga gggaaaagcg ggcgcgggca tgacgaagca
      901 cataattgat tcaatcatat ccggaacggc gctagcgggc gtcctcttcg ttggtgtacc
      961 aatccggctt caccgcatag tgaggtccgt cgtaaatctc gaccacgatg gtttcctcgt
     1021 gcgcgatggt tggcccgtgc acattgccct tgggattgca gtagaagctg ccggccgtga
     1081 gcacgatccc ggtctgggtg tactcgtacc ggcccgacag gcagatcatg aactggttgg
     1141 acggatgata gtgcggcgac gggattccag cgccccgcgc gaaccggatc aacgccaccg
     1201 acgccccggt ttctgggttc cgccacagca ttttttccga cacacctgtg agcgattttt
     1261 cccgccatgg catggcgctg ctgtcgatca ggatttcttc aagtttgggg gcgccggttg
     1321 gaaggtccat tcggtcctca atcgtcctgc tgctgcggcg cagggggcgg cgcgcgatgc
     1381 aagggcctgc tgtcgcgcag caactgcgcc ggaggatggg aaggccgaaa atccgaagtt
     1441 cttggggccg cttttggcaa cggggcagaa ttggacgtga gcatcggcac catcatccac
     1501 ccatccacgg cacggagaca agtagatatt catactcgca agacggcgca cggccaagtt
     1561 attggcaacg gatccagtcg caagggagcg tgctatgcaa tttctcttga aaaacttttg
     1621 cgtgctggag ttgccctgag catcatcctg ctgtcgattg ccgccatggc cgggccgaag
     1681 gaggacgtag cggccgcaac cttgacatgg gcgcgggcgt tcggcgaaga cggtgttgcc
     1741 gctctatgcc gccggtgggg aaccctgtcg ccgacggtgc gcaccgatcg aacagcgttt
     1801 gcggaattat ttcgcgacgg ccttttcaag ggttcttcga ggcctcaaag catcgtttcg
     1861 gcgaccaact gacccgcgtc tacgacgcta cggcggtcat accggctatt acacgttctc
     1921 cttgtcaagg aagagagaca aagaactcgc cagcgcgcta cagctttata tgtcaagaac
     1981 ggcgagcaat ggcgccgacc gccccgaaat agctcttccg atatcggcct tgggaggaag
     2041 cgatacgtga cgctcgttta gctggtgcgt ttttacgatt tcgccggata tcgcgcgcac
     2101 tggcgggcgc catcgccata agcttcctcg cactcctcgc gcgtgatcgc gccgcggccg
     2161 atgaccttgg cgaggagata gtccgcgacc gcctcgattt cgcggcgatt gagggtcgcg
     2221 cccggcggca gcgccggggt atcgcggccg agttcggcct cggtcactcc gtagcaacgc
     2281 ttgtccgtat aggcctgctc atcgaaatgc ggcatcgcct tgccgggcac gccgcatccg
     2341 atcacctcga tcaactggtc gcgcttgagc ggcgacaccc gcagattggc gccgccgttc
     2401 gactgcggct cgccggcgcc gtcaccggcc cagccgtggc aatacaggca ctgcgccttg
     2461 tcgagaaaca gccgacggcc gaaggcatag tcgtcggcac gcgcgggtgc ggcaaccacg
     2521 atggcaaggc agatgaggaa ggctagattc gtgagcgttg gtgtcatgaa tcaactgata
     2581 acctgttcgt cgcccagacg gcgttcccgc attgcgcgcc cgcaaaggcg gcgctccatg
     2641 ctcttacaac ccgaacacga acaacatggt cgcgttgccc tgggtcttga gttccggcga
     2701 gcgggcgatc tttgccttgc cgaccgggcc aatgccggaa gcaattgcga tgtattgctt
     2761 gccgttcacc gcataggtca tgggcggcgc cacgaagccg gtgccgacat tgacctccca
     2821 cagcttatcg agcgtctggt cgtcgaacgc caagatggtg ccgtcgagca tcgctgtgac
     2881 cacgatgccg ccggcggtag tcagcacgcc ggagaggtcc ggatagggca gctccttgcg
     2941 ggccttcact tccgcagtga gcggatcgac gaccgtcagg ctgcccacga tgcgctcgtt
     3001 gttgacatag ccgccgccgc cgaatttgcc gcgcacatga gcggtgggat cgggggtgat
     3061 gtcggcacag ccttcgctcg ccccgatata gaggagcttg gtcttgtcgg agtaggacgg
     3121 cggccagaag ttggtgccgc cgtggacgtc gggacacgag ttcttgatgg tgtcggtgac
     3181 ggatttccaa tcgtgattgt aggtctgcac gtccttgccg ggatcgtagt cgagcggctt
     3241 gccggtcttg ggatcgaggc ccttggtcca attcaccttc tgagcatatt gcac
//
LOCUS       DATILV010000024         1861 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2051073, whole genome shotgun sequence.
ACCESSION   DATILV010000024 DATILV010000000
VERSION     DATILV010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1861)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1861)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1861
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2051073"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..680
                     /locus_tag="VLJ17_00395"
     CDS             <1..680
                     /locus_tag="VLJ17_00395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008837429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nucleotidyl transferase AbiEii/AbiGii toxin
                     family protein"
                     /protein_id="HSV21466.1"
                     /translation="IDLVRTSSGPIGPVLDKIRDVLEPWLGHASFDQSPVAPKLRFRV
                     EAEDKTSPAPIRLKIEVHTREIVAYDPPRAMPFEVKNPWFSGRAEIATFSNEEILATK
                     LRALLQRDKGRDLIDLSHAAEVFKGLDHERVVALLQQYLATAGQGISRAQAEQRMFAK
                     LANPGFMADVRPLLSADEAERFDGATARAAFRAVFLSVVKRFPGQAWARTEEMAARFG
                     MAELAKD"
     gene            complement(999..>1861)
                     /locus_tag="VLJ17_00400"
     CDS             complement(999..>1861)
                     /locus_tag="VLJ17_00400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003523759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /protein_id="HSV21467.1"
                     /translation="VKGLANTDAATIVSTRAGQPFVSVDDLWRRAGVPSASLVQLAEA
                     DAFQPSLKLARREALWAIKALRDEPLPLFAAASARENETVPEIHEPLVALRPMTAGGE
                     VVEDYGHVGLTLRDHPVAFLREDLKRRRIITCREAMQAHDGRWVESAGLVLVRQMPGS
                     AKGVMFITIEDESGIANLVVWPTVFEKQRRVILSAGMMAVYGRIQREGDVVHLVAHRL
                     TDLSEELASVGDRDAAFPLPHGRGDEFHHGSPGLDPRSMPKGPKPRDIYDAYGHIDQI
                     KVMAARNPCL"
BASE COUNT          388 a          594 c          541 g          338 t
ORIGIN      
        1 acattgatct ggtcaggact tcctctggcc ccatcgggcc agtgctcgat aaaatcaggg
       61 atgtcctcga accatggctc ggccatgcca gtttcgatca aagccctgtt gcaccgaaat
      121 tgcgtttccg ggttgaagcc gaggacaaga cctcgccggc tcccatccgc ctgaagatcg
      181 aagttcatac gcgggagata gtggcctacg atccgccgcg cgcgatgccc ttcgaggtca
      241 aaaatccgtg gttttcgggc agagccgaaa ttgcgacgtt ttccaacgag gaaatccttg
      301 caaccaagct tcgtgcgctc ctccagcggg acaagggaag agacctgatt gacctttccc
      361 acgccgccga agtgtttaag ggtctcgatc acgaacgcgt ggtggccttg ctccagcaat
      421 atcttgctac ggccgggcag gggatttctc gggcgcaggc cgagcagcgc atgtttgcca
      481 agctggcgaa ccccggcttc atggccgacg tgcggccgtt gctgtccgcc gatgaagccg
      541 agagatttga cggcgctacc gcaagggccg cgttccgcgc ggtgtttcta tcagtcgtca
      601 agcgctttcc gggtcaggcc tgggcgcgga ccgaagagat ggcggcgcgc ttcggcatgg
      661 cggaactagc caaagattaa tgcgaccggc ccatgcgcca tcgcttctgg cggctcgttc
      721 cggccgtttt gcaaatccca cacgtcgaaa ttcaacccac cttcgacaac atcaccgaaa
      781 tcaaggacga aatctcatga caaaaccgac gctgaaactc gtgccgcaaa atccgccaac
      841 tgccgaaaat cggcaagtcc aacgtacgac gccgctgcgc aaaccgaact cggcgtacag
      901 atcccgggaa tatctcaccc cgacaaaaat ggatgcgatg ttggaagccg cacgcaagat
      961 gcgccaccgc caccgggacg ccacatgctc ctgatcgcct acaggcacgg gtttcgtgcg
     1021 gccatcacct tgatctgatc gatgtgacca taagcatcgt agatgtcacg cggcttcggg
     1081 ccttttggca tgcttcttgg atcaaggccg ggacttccat ggtggaattc gtctccacgc
     1141 ccatgcggca gcggaaacgc agcgtcccga tcgccgacgc ttgccaattc ctctgacagg
     1201 tcggtcagcc ggtgcgcaac aagatgcaca acatcgccct cgcgctggat gcggccatag
     1261 accgccatca tgccggccga cagaatgacc cgccgctgct tctcaaaaac agtcggccag
     1321 acgacgagat tggcgatgcc gctctcgtcc tcgatggtga tgaacatgac gcccttggcc
     1381 gaacccggca tttgccgtac cagcacaagt ccggcactct ccacccatcg gccatcgtgt
     1441 gcctgcatcg cctcgcgaca ggtgatgatg cgccgccgct tcaagtcttc gcgcagaaag
     1501 gcgacggggt gatcccgaag ggtcaagccg acatggccgt aatcctcgac cacctcgccg
     1561 ccggccgtca tcggccttaa cgcgacgagg ggctcgtgga tctcgggcac ggtttcattc
     1621 tcgcgggcgg aggcggctgc gaacaacggg agcggctcgt cgcgcaacgc cttgatcgcc
     1681 cacagcgcct cgcgccgggc aagtttcagc gagggttgga acgcatccgc ctcggcgagc
     1741 tggaccaatg aggcggaagg cacgccggcg cggcgccaca aatcatcaac ggagacaaac
     1801 ggttgacctg cccgcgtgct gacgatcgtg gcggcatcgg tattggcgag acccttgacc
     1861 a
//
LOCUS       DATILV010000025        13641 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_517752, whole genome shotgun sequence.
ACCESSION   DATILV010000025 DATILV010000000
VERSION     DATILV010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 13641)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13641)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13641
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_517752"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..550)
                     /locus_tag="VLJ17_00405"
     CDS             complement(<1..550)
                     /locus_tag="VLJ17_00405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21468.1"
                     /translation="MRLLVRGLLLAWAASPAFAGDIDNSWLRGSTSFPADPPTYRRWS
                     GAYGGGQIGLDSHSLQFNDNGNARITTLVDADPILAVARAPILGDLERSDARGLSYGG
                     FIGYNYQIDDTVLGLELNLNGSNINARTGSAKTATGALCPNAAAPCTITVNASNAATD
                     SLNEYGTLRARGGWAYGSFLPYV"
     gene            945..2354
                     /gene="thrC"
                     /locus_tag="VLJ17_00410"
     CDS             945..2354
                     /gene="thrC"
                     /locus_tag="VLJ17_00410"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008961897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HSV21469.1"
                     /translation="MRYISTRGEAPALGFIDVTLAGLARDGGLYVPETWPTIDAATIA
                     GFAGRSYADVACDVISRFTAEGIADLTRMTREAYDGFRHPAVTPLVQLGPNTFVLELF
                     HGPTLAFKDLAMQLLARLMDHALRARHQRTTIVVATSGDTGGAAVEAFGGRAQVDVVV
                     LFPNGRVSSVQRRMMTTSNRDNVHPIAVDGTFDDCQALVKSMFNHQTFRDRVRLSGVN
                     SINFARIAAQVVYYFVAAVALGAPHRRIAFTVPTGNFGDVFAGYVAARMGLPVQRLTI
                     ATNVNDILARALTTGTYEPREVTPTASPSMDIQVSSNFERLMFDAYGRDPQPVRGAMA
                     ALAQSRRFRIGERALTQMRSLFSADRALEDETAAAIRTTRRETGYLIDPHTAVAVAVT
                     EKANLDPAIPTVVLSTAHPAKFPDAVEKACGVHPGLPDWLADLASRPERVTVLPADLS
                     AVENHILVHSRAAREGVPA"
     gene            2351..3619
                     /locus_tag="VLJ17_00415"
     CDS             2351..3619
                     /locus_tag="VLJ17_00415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007599446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HSV21470.1"
                     /translation="MSVEVTRLPTGLVVVTDAMPHLQTASLGCWINCGSRNEHPDEHG
                     ISHFLEHMAFKGTARRTARQIAEEIEAVGGDLNAGTGVETTAYYARVLKADIGLGLDV
                     LSDILAHPSFDPDELTREKNVIVQEIGAVEDTPDDLVFEHLQATAFPGQPVGRSVLGT
                     KATVRSFDAKRLRAYLARNYRAPGMVVAAAGAVRHDAVVAEAERRFGGFVGPAAPAPE
                     PARFSGGVFTEERDLEQVHIALALEGVAQRDVAIYSLQVFANVLGGGMSSRLFQEVRE
                     LRGLCYSIYAFHAPYADTGMFGIYAGTDAIDAPELMRVVVDEITAAADTITETEIARA
                     KAQMKAGLLMALESSGTRAEQLARQIIVHGRPIPIEEIVGKVDAVTVESTRAAGRALI
                     ARSRPAVAALGPSGLDSAAAIAESLTQKAA"
     gene            3638..4234
                     /locus_tag="VLJ17_00420"
     CDS             3638..4234
                     /locus_tag="VLJ17_00420"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020176686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HSV21471.1"
                     /translation="MAFFRTSAFAETLPAIEGEQVILRQPQMSDYSEWAALRERSREF
                     LGPWEPVWPADDLTRGAFRRRLKRYTEDQRSDQAYSFFIFRKADGVLVGGITLSNVRR
                     GVAQAGSIGYWMGEPYARRGLMSMALRALIPFSFTTLRLHRLEAACITTNVASIRLLE
                     KSGFQREGYARQYLCINGMWQDHLLYARIKDDPPHLRR"
     gene            complement(4203..4718)
                     /locus_tag="VLJ17_00425"
     CDS             complement(4203..4718)
                     /locus_tag="VLJ17_00425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21472.1"
                     /translation="MVAAPWRYSTLGHSISAAGVPAAACGAAELRFSESPEKKDFTLL
                     ANEALDDAGAGVVDAGVGLVDAVDAAAGDGELSPLKPLNEEQAVKVAATTAAATAGRQ
                     TRPRAPSREMSALPSCRLRLSTLIMRNLHPQRHPYSSGTVTDQKPLGPLSGELARVGR
                     HFNGADAADRP"
     gene            4717..5142
                     /locus_tag="VLJ17_00430"
     CDS             4717..5142
                     /locus_tag="VLJ17_00430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21473.1"
                     /translation="MAVNSPGSENEALGLRYQASFTQTARECILRGNDLTIKVGVQGR
                     IVIGPAGAPGSINIPLRYALVREGKEPKTLWTKLFMVPVTVPENQLNLPWLHIEEEMT
                     VPRPSGDEIEAYVIYIGFDPEGATAKPKPVAKPKPARPR"
     gene            complement(5221..5715)
                     /locus_tag="VLJ17_00435"
     CDS             complement(5221..5715)
                     /locus_tag="VLJ17_00435"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011475212.1"
                     /note="Produces ATP from ADP in the presence of a proton
                     gradient across the membrane. Subunit B is part of the
                     membrane proton channel; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP F0F1 synthase subunit B"
                     /protein_id="HSV21474.1"
                     /translation="MIDFIYEPETWVAIAFAILVGILIRLGVPKLLFKRLDDRSARIK
                     AELDEALKLRQEAEGVLAEYRRKQSDAEKVAQSIILNARGEAERIAADAKAKVEEFIA
                     RRTKLAETKIARAEAQALADVRSAAADAAIAAAEAILVKTTHGPAAEALVTQGISDLK
                     AKLN"
     gene            complement(5725..6315)
                     /locus_tag="VLJ17_00440"
     CDS             complement(5725..6315)
                     /locus_tag="VLJ17_00440"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013169187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HSV21475.1"
                     /translation="MCRQSARPDREAEPAMAEQHLTGIDATPPSEHGGGFPPFQKDTF
                     GSQLLWLAIFFIALYFIASKLALPRVGSIIADRRKRISDDLAEAARMKDAADAAIATY
                     EKALADARVRAQTIAAETRDKVNAEAAASRRTAEASLRAKLTAAEQTIAATKTAAMAN
                     VQGIAQDAAIAIVAQLTGKAPSAASAAAAVKAAIKR"
     gene            complement(6337..6564)
                     /locus_tag="VLJ17_00445"
     CDS             complement(6337..6564)
                     /locus_tag="VLJ17_00445"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HSV21476.1"
                     /translation="MDPIAAKYIGAGIACIGMGGAGVGVGTIFGNYLAAALRNPSAAQ
                     GQFGNLIFGFAVTEALGIFSLLIALLLLFAL"
     gene            complement(6608..7357)
                     /locus_tag="VLJ17_00450"
     CDS             complement(6608..7357)
                     /locus_tag="VLJ17_00450"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HSV21477.1"
                     /translation="MADPIHQFQIVNYFSLGKIGSVDFAFTNSALYMGIAVGLTAALM
                     LGATAGRQLVPGRMQSIAELAYEFIADMIRNTIGEGGMRFFPFVFSLFMFILVSNLVG
                     LIPYNFTVASHIIVTAALALLVFFTVVVYGFWKNGLHFFDTVVPKGVPGYILPAIVFI
                     EIFSFLVRPLSHSVRLFANMLAGHITLKVFAGFVTMLGGLGFAGWIGATVPLALTVAL
                     TALELLVAFLQAYVFTILTCIYLNDALHPGH"
     gene            complement(7430..7798)
                     /locus_tag="VLJ17_00455"
     CDS             complement(7430..7798)
                     /locus_tag="VLJ17_00455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006615620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HSV21478.1"
                     /translation="MADNTRDSNDPERRRADEALFSRLRRLGDQLGQQRPVEPSESRG
                     GRPAADASGYARGFRLSSELVAGVVVGAAIGWALDRMLGISPWGLIIFLLLGFAGGVV
                     NVIRAAGVAPERDPGVPPER"
     gene            8044..8625
                     /locus_tag="VLJ17_00460"
     CDS             8044..8625
                     /locus_tag="VLJ17_00460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21479.1"
                     /translation="MTGTLYVIAILAVTAMLGAPLLAQEKSEAAPTQVPQSQPQVQPP
                     EFADPQFVFHRIDSGFVRLDLRTGAVASCSQNAAGWICIPGREERAALDREIARLQRD
                     NVVLKNALLEHGLPLPNEMKTDADAAVPAESIPRPPQSVPPAAPASPKSADSDRASRD
                     DAELERVMNAMEKLWRRLVEMMVNIQRDVLKKG"
     gene            8664..9131
                     /locus_tag="VLJ17_00465"
     CDS             8664..9131
                     /locus_tag="VLJ17_00465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018459989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="secondary thiamine-phosphate synthase enzyme
                     YjbQ"
                     /protein_id="HSV21480.1"
                     /translation="MNRLSAIAVTAPELIIAATLAIETRGEGFVEITQDIKDFIATTG
                     AGDGILLLFIRHTSASLVIQENADPDVRIDLGTALNRLAPVAAGWIHDAEGADDMPAH
                     VKTMLTGVSLHIPVREGILELGTWQGVFVAEHRAQPHRREVVLRYVGGRRRSA"
     gene            9320..9997
                     /locus_tag="VLJ17_00470"
     CDS             9320..9997
                     /locus_tag="VLJ17_00470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020181384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV21481.1"
                     /translation="MGASHYRLVIADDHPLFRGALREAVSGLFERDVIAEAGSFDDIS
                     KLLDRNNDVDLVLLDLAMPGIRGFSGLMYMRAQYPGIPVVIVSGNDDPAVIRRCMEFG
                     ASGFIPKTLGVDQIRKAIEQVLAGEIWTPPDVDLCARSDDDSAAILARLASLTPQQVR
                     VLMMLSEGLLNKQIAYELSVSEATVKAHVSAILQKLGVESRTQAVIVAAKIEVGHWPQ
                     APSPDSH"
     gene            complement(10009..13542)
                     /locus_tag="VLJ17_00475"
     CDS             complement(10009..13542)
                     /locus_tag="VLJ17_00475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012494527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NahK/ErcS family hybrid sensor histidine
                     kinase/response regulator"
                     /protein_id="HSV21482.1"
                     /translation="MLQGWFVIVIALVYIGLLFIIASYGDRRARLGATDRPRPLIYPL
                     SLAIYCTSWTFFGSVGLATRTGFDFLAIYIGPVAMIGLASPLIARITRLSKAQNIVSI
                     ADFIGARYGKHQGVAATVAIIAIIGMIPYIALQLKAVSSSLDTIVAPLATWAGPVQPM
                     LGDPPLFVAMSLAAFAVLFGTRHIDATEHQHGLMLAIAVESIVKLVAFVAVGIFVTFV
                     MFDGPVALFAEALERPDTTAVLTAGTSFGTMGAMTLLSLAAIILLPRQFHVTVVENKN
                     ESEIRRASLLFPVYLFLINLFVVPVAIAGMLTFSPGTVDSDMYVLALPISAGAEVLAL
                     ATFIGGLSAAAAMVIVESIALAIMVSNDIVVPLALTRRLGTNVGAHLLTIRRIAIFAV
                     LLFAYLYYRSAGEAQLAAIGLMAFAAIAQLAPAFFGGLMWRRATAGGALAGMTVGILV
                     WAYTLLLPSLTVSALGTTFLAEGPFGIEALRPQALFGLDLPPLVHGMMWSLTLNLLAY
                     VAVSLSRQPAAIERMQADLFVPRGLTPTPSFRLWRSAVTVEELTAAVGRFLGEEHTRT
                     SFEGFAAERRMRLEPGAQADFELLRYAERLLASAIGAASSRLVLSLLLRQRTVSTKAA
                     LRLLDDANAAIHYNREILQTALDHVRQGIAVFDKDTHLICWNQQFGELLQLPHEILRI
                     GINLAEILRFNAERGAFGPGNPEALVRERLPHYTADLQPFLERFLDRGLVIEVRVNRM
                     PDGGVVTTLTDITPSVAAAEALARANENLERRVRERTMELEHLNTELAKAKSAAEAAN
                     LSKTKFLAAASHDILQPLNAARLYVTSLVERLAPTLPSPASGRGEGGGEAQLVANIDA
                     SLEAVEDILTALLEISRLDAGAMKPEIASFRVDELLRRLEFDFAPLARNQGLDLVFVP
                     CSLNIRSDRRLLRRLLQNLVSNAVKYTRTGRVLVGCRRRGKHVRIDVFDTGIGIPPDK
                     RHAVFAEFHRLDQGAKVARGLGLGLSIVERIARVLDHPIALTSEVDRGTHFSIDVPVA
                     PTELGETRLPEPRIDRGRIAEILVLCIDNDPNVLDGMVTLLRGWGCETIQAADLAEAV
                     ATLRAAGKFPGGLLVDYHLDHGNGIEAVTELRRLFGAEIPAVLITADRSPEVREAARA
                     LTIQMLHKPLKPASLRAIMSQWTAHRFAAAE"
BASE COUNT         2703 a         4180 c         4295 g         2463 t
ORIGIN      
        1 caacgtaggg caggaagctg ccatacgccc agccaccgcg agcacgtagg gtgccgtatt
       61 cgttgagcga gtcggtcgca gcgttcgagg cgttgactgt gattgtacag ggggcagccg
      121 cgttcgggca gagggctcca gtcgccgttt tagcgctgcc ggtcctagca ttgatgttgc
      181 tgccattgag attgagttcg agtccgagca ccgtatcgtc gatctgatag ttgtagccga
      241 taaagccgcc atagctcagt cccctggcat cgctacgctc taaatcgccc aagatgggcg
      301 cacgggcgac agctaaaatt ggatctgcat ccacaagagt agtgatcctc gcgttgccgt
      361 tatcgttgaa ctggagcgag tgcgaatcca gaccgatctg cccaccgcca taggcgccgc
      421 tccagcgtcg ataagtgggc ggatcagccg ggaagctcgt cgagccgcgt agccacgaat
      481 tgtcgatatc gccggcgaag gccggcgatg ctgcccatgc aagcaataag ccacggacca
      541 agagacgcat gcttgcctcc atggcggtga cacgcgtcca tcgcccgaac cgcctcgaaa
      601 agatttagtc ccattaacct taacggagtg ttagctccgc cgcggtcggg gatgaagttc
      661 cgggaggtaa catgatgggg cgaaatggaa ggaaaaaaga tgtccaatca atggcttgca
      721 catatgccca aaagacgcga gccaacgggt cctcgcatag ctcatgcggc cttccgttcc
      781 ttgtgccggg ggccgcttat gattactctt gggaaacgcg gcggcaattc cgccggctgc
      841 ctgggattcc cgggaaatcg atggtttgag cggcaagcag ggactgcggc gagcagcccg
      901 gcctgatcgt ttttattcgg ctgaccgatt tttaaggacg gcgcgtgcgc tacatctcga
      961 cccgaggaga ggctccggca cttggtttca tcgacgtcac tcttgcgggt ttagcgcgcg
     1021 atggcggcct ctacgtgccc gagacgtggc cgaccattga tgctgccacg attgcgggat
     1081 ttgccggccg ctcctatgcg gacgttgcct gcgacgtgat ctcccggttc accgccgaag
     1141 gcatcgcgga cctcacccgc atgacgcgtg aagcctatga cgggtttcgc catccggcgg
     1201 tgacgccgct ggtgcaactc ggcccgaaca cgttcgtgtt ggagctgttt catgggccca
     1261 cgctcgcctt caaggatctg gcgatgcaac tgctggcccg cctgatggat catgcgctac
     1321 gggcgcgcca ccagcgcacc accatcgtgg tggcgacctc cggtgataca ggcggcgctg
     1381 ccgtagaagc atttggcggt cgagcgcagg tggacgtcgt cgtgctgttt cccaatggcc
     1441 gcgtctccag cgtgcagcgg cgtatgatga cgacatccaa tcgcgacaac gttcacccca
     1501 tcgccgtcga cggcaccttc gacgattgcc aggcgctggt gaagtcgatg ttcaatcatc
     1561 agactttcag ggatcgtgtg cgactgtcgg gcgtcaattc catcaacttc gcccgcatcg
     1621 ccgcccaggt ggtttattat tttgtcgctg ccgttgcact cggtgcgccc catcggagaa
     1681 tagccttcac ggtgccaacc ggaaacttcg gcgacgtgtt cgccggctat gtggcggccc
     1741 gtatgggcct gccggtccaa agactcacca tcgccaccaa cgtcaacgac attttggcac
     1801 gtgcgctgac gaccggcacc tacgagccgc gagaggtgac gccgaccgct tcgccctcaa
     1861 tggatatcca ggtttcgtcg aacttcgagc ggttgatgtt cgacgcctat gggcgcgatc
     1921 cgcagccggt gcgcggtgcc atggcggcgc tggcgcaatc gcgccggttc cgcatcggcg
     1981 agcgggcctt gacgcaaatg cgttctctct tctccgccga ccgcgcactc gaggatgaaa
     2041 ccgcggcggc gatccgaacc acacggcgcg aaaccggtta cctgatcgat ccccacaccg
     2101 cggtcgcggt tgcagtcacc gagaaagcaa acctcgatcc cgcaatcccc acggtggtgt
     2161 tgtcgaccgc ccatccggcg aagtttcccg atgccgtcga gaaggcctgc ggggtccacc
     2221 ccggtctgcc cgactggctc gcggatctcg cctccaggcc tgagcgtgtc acagtgctgc
     2281 cggccgacct gtccgccgtt gaaaatcata ttcttgtcca cagccgcgcc gcgcgcgaag
     2341 gagttcctgc atgagcgtcg aagttacccg tctgcccact ggactggtcg tagtcactga
     2401 cgcgatgccg catcttcaga ccgcctcgct aggctgctgg ataaactgcg gcagccgcaa
     2461 cgagcacccg gatgagcacg gcatttcgca ttttctcgag catatggcat tcaagggcac
     2521 cgcgcgccgc accgcccgcc agatcgccga ggaaatcgag gcggtcggcg gcgatctcaa
     2581 cgctggcacc ggcgttgaga cgacagccta ctatgcacgc gtcctcaagg ccgatattgg
     2641 cctcgggctc gacgtgctgt ccgacattct ggcgcatccg agcttcgatc ccgatgagct
     2701 cacccgcgaa aagaacgtca tcgtgcagga gatcggagcc gtcgaagata cgcccgacga
     2761 tctcgtgttc gagcacctgc aggcgaccgc gttccccggc cagccggtcg gccgatcagt
     2821 cctcggcacc aaggcgacgg tgcgttcgtt cgatgccaag cgcttgcgcg catacctggc
     2881 tcgcaactat cgggcgcccg gcatggtggt cgccgctgcc ggcgcggttc gtcacgacgc
     2941 ggtggtcgcc gaggcagagc gacgatttgg cggcttcgtc gggccagccg cacccgcgcc
     3001 cgaaccggcg cggttcagcg gtggcgtgtt cactgaggag cgcgatcttg aacaggttca
     3061 cattgcgctg gcgcttgagg gcgtcgcgca gcgcgatgtt gcgatctata gcctgcaggt
     3121 gtttgccaac gtgctagggg gcggaatgtc atcgcgcctc ttccaagagg ttcgcgaatt
     3181 gcgcgggctg tgttattcga tctacgcctt ccatgcgccc tatgcggaca ccggaatgtt
     3241 cggaatctat gcgggcaccg acgcgatcga cgcgcccgaa ttgatgcggg tcgtggtcga
     3301 cgagatcacg gccgcggccg acactattac ggagactgaa attgcccggg ccaaagcgca
     3361 gatgaaggcg gggctcctga tggccctcga aagctcggga acgcgtgccg aacagcttgc
     3421 gcggcaaatc atcgtccacg gccggccgat cccgatcgag gaaattgtcg gaaaggtaga
     3481 tgccgtcacg gtcgaaagta cgcgcgcggc cggtcgcgcc ctaatcgccc gctcacggcc
     3541 ggcggtcgcg gcgctcgggc cgtccgggct cgacagcgcg gcggcgattg ccgagagtct
     3601 cacccaaaag gccgcctaag ccccaggtcg cagtgcgatg gcgttcttcc gcacgagcgc
     3661 attcgccgag acgctgcccg cgatcgaggg cgagcaggtg atcctacgcc aaccgcaaat
     3721 gtcggactat tccgagtggg cggcgctgcg ggagcgcagc cgcgaattcc ttgggccgtg
     3781 ggaaccggtg tggccggcag atgacctgac ccgcggggcc tttcgccggc gcctcaaacg
     3841 ctatacggaa gatcagcgct ccgaccaagc ctactcgttc ttcatcttcc gcaaggccga
     3901 cggcgtgctg gtcggcggta taacgttatc caatgtgcgc cgcggcgtcg cccaggccgg
     3961 cagcatcggc tattggatgg gcgagcccta tgcgcgccga ggcctgatgt cgatggcgct
     4021 acgcgctctg atccctttca gcttcacgac tttgcgcctg caccggctcg aggcggcatg
     4081 catcaccacc aacgtagcat cgatccggct tctggaaaaa tctggtttcc agcgcgaagg
     4141 gtacgcccgg caatacctct gcatcaacgg catgtggcag gatcatctgc tttatgcgcg
     4201 aatcaaggac gatccgccgc atctgcgccg ttgaaatgtc ggcctaccct cgcaagctcg
     4261 ccgctgaggg ggccgagtgg cttttggtcc gtcacggttc cgctgctata agggtgccgc
     4321 tggggatgca gatttcgcat gatcaacgtc gacaatcgta accggcacga gggcaacgcc
     4381 gacatctcgc gcgagggggc gcgaggccgc gtttggcggc cggcagtcgc cgcggccgtg
     4441 gtcgcggcga ccttgacggc ttgttcctcg tttagcggct taagcggcga caactcgccg
     4501 tcgcccgccg cggcgtcgac ggcgtcgacg agacccacgc cggcgtcgac gacacccgcg
     4561 ccggcgtcgt ccaacgcttc gttcgccagc agagtaaagt ccttcttctc gggcgactcg
     4621 gaaaatctca attcggcggc gccgcaagcc gcggccggta caccggcggc ggatatcgaa
     4681 tgtccgagtg ttgagtatcg ccagggcgcg gccaccatgg cggtcaacag tcccggatcc
     4741 gagaacgagg cgctcggtct gcgctaccag gcaagcttca cgcagactgc ccgtgaatgc
     4801 atcctgcgcg gcaatgattt gactatcaag gtcggggtcc aggggcggat tgtgatcggt
     4861 ccggccggcg cacccgggtc aatcaacatt ccgctgcgct atgcgctggt tcgtgaaggc
     4921 aaggagccca aaaccttgtg gaccaagctc ttcatggttc cggtcacggt cccggaaaat
     4981 cagctcaatc tgccgtggct tcacatcgaa gaggagatga cggtgccgcg tccgtccggc
     5041 gacgagattg aggcctatgt gatctatatc ggcttcgatc ctgagggcgc gacggccaag
     5101 ccgaagcctg tggccaagcc gaagcccgcg cggccgcggt gaaatcgctg gtcgggctgg
     5161 attccggcct tgtgcaaagc gcgcgccccg gaatgactgg caggcgctga cacggcgcaa
     5221 tcaattcagt ttggctttga gatcgctgat accctgagtg acgagcgctt cggcggcggg
     5281 gccgtgcgtc gttttaacca atattgcttc ggcagccgcg atggccgcgt cagcggcggc
     5341 cgaacggacg tcggcaagcg cctgcgcctc tgcccgagcg atcttggtct ccgccagctt
     5401 ggtgcggcgg gcaatgaact cctcgacctt ggctttggcg tctgcggcga tgcgctcagc
     5461 ttcaccgcga gcgttgagga tgatcgactg ggccaccttt tcggcgtcgc tttgcttgcg
     5521 ccgatattct gccaacaccc cttctgcttc ctggcgcagc ttaagggctt cgtcgagctc
     5581 ggccttgatg cgggcgctgc ggtcgtcgag cctcttgaac agcagtttgg gtactccgag
     5641 cctgatcagg atgccgacca agatcgcaaa ggcgatcgcg acccaggttt ccggctcgta
     5701 aatgaaatcg atcatcgcaa gccctcagcg cttgatcgcg gctttgacgg cagcggcggc
     5761 gctcgccgcc gacggcgctt ttccggtaag ttgcgcaacg atggcaatgg ccgcgtcctg
     5821 tgctatgccc tgtacgttcg ccattgcggc cgtcttggtc gccgcaatcg tctgctcggc
     5881 ggcagtcagt ttggcacgga gactggcctc cgcggtcctg cggctcgctg cggcttcagc
     5941 gttgaccttg tcgcgggtct cggcggcgat ggtctgcgcg cgcacgcggg catcggccaa
     6001 tgccttctca tatgtcgcga tggcggcatc tgccgcatct ttcatgcgcg cggcttcggc
     6061 gagatcgtcc gaaatgcgct tgcgccgatc cgcgatgatc gatccgaccc gcggcaaggc
     6121 gagcttggat gcaatgaaat agagcgcgat gaagaagatc gcgagccata gcagctggga
     6181 gccgaacgtg tccttctgga aaggcggaaa accgccgccg tgttcggaag gaggcgttgc
     6241 gtcaatcccg gtcaaatgtt gttccgccat agcgggctcc gcttcgcggt ccggccgcgc
     6301 cgattggcgg cacaggttat ctttgcatgc gctattctag agagcaaaca gcagcaagag
     6361 cgcgatcagc agcgagaaga taccgagcgc ctcggtgacg gcgaagccga agatcaggtt
     6421 gccgaactgc ccctgcgcgg cggatggatt gcgtagcgcc gcggccagat agttgccgaa
     6481 gatggtgccg acgccgacac cggcgccacc catgccgata caggcaatac cggcgccgat
     6541 atatttggcg gctattggat ccatgatgaa gctccttttc caagtttgct ctaaagcgat
     6601 ggggccgtca gtggccgggg tgaagcgcat cgttgaggta gatgcaggtg aggatggtga
     6661 acacgtaagc ctgcaggaaa gcgaccagca gttcgagcgc ggtcaacgcg acagtaaggg
     6721 cgagcggtac cgttgcgccg atccagcccg cgaaaccaag cccgcccagc atggtgacga
     6781 atccagcgaa gactttgagc gtgatgtggc cggccagcat gttggcgaac agacgcacgc
     6841 tgtgggagag cggacgtacg aggaacgaga atatttcgat aaacacgatc gccggcaaaa
     6901 tgtagccggg gacgcctttg ggcacgaccg tgtcaaaaaa atgcaggccg tttttccaga
     6961 acccataaac cacaacagtg aagaaaacga ggagtgccag cgccgccgtg acgataatgt
     7021 ggctggccac cgtaaaatta tacgggatca gcccgaccaa gttcgaaacc aggatgaaca
     7081 tgaacagcga gaacacaaac gggaagaatc gcatcccgcc ctcgccgatc gtattgcgta
     7141 tcatgtcagc gatgaactcg taggcaagct cagcaatcga ttgcatgcgt ccgggcacaa
     7201 gctggcgtcc ggcggtggcg ccgagcatta gggcagcggt gagcccaacc gcgataccca
     7261 tgtacagggc ggaattggtg aaagcgaagt caaccgagcc gatcttgcca agcgaaaaat
     7321 agttgacgat ctggaattga tggatcggat cggccatgac cgcaatggtc ccctcagttc
     7381 ttcttcccaa cgccgccggc cgacatccca tcgtgccgca acgtccttcc tagcgctcgg
     7441 gcggaacacc cggatcacgt tcgggcgcaa cgccggccgc ccgtatcacg ttcaccacgc
     7501 cgcccgcgaa gccgagcagc aaaaatatga tcagccccca cggcgagatc cccagcatgc
     7561 ggtcaagggc ccagccgatg gcagcaccga cgacgacccc ggccacgagc tcgctggaga
     7621 gtcgaaatcc gcgtgcataa cccgatgcat cggcagccgg tcgaccaccg cgtgattcgg
     7681 acggttcgac cggccgttgc tggccgagtt gatcgccgag acgccggagc cttgagaaaa
     7741 gagcctcgtc ggccctgcgc cgttccggat cattgctatc gcgcgtgtta tcggccatcc
     7801 tgatgccact cgcgcgccac tgacgatccg gcgtcccccc ctcaaggccg cgcgaccata
     7861 cttattgggt gtggcatagt caagaatctg tgctgacgcg acaaacgtca gaggcgaaag
     7921 gatcatcatg ccatcatcga gctgccgtca aaccttgagg aatgactttg cgccgcaata
     7981 tggctggggg cgccgcgcct atgggcactc cgtcgcagcg cgcgtcgtgc aacggggagc
     8041 atcatgactg gaacccttta tgtaattgca atcctggccg tgacggcaat gctgggtgct
     8101 ccgctgctcg cccaggaaaa atccgaggca gcgccgacac aggtgcctca atcgcaacct
     8161 caagtgcagc cgccggaatt cgccgatccg cagtttgtgt ttcaccgcat cgatagtggc
     8221 ttcgtgcggc tcgatctccg caccggtgcg gtcgcctcgt gcagccagaa tgcggccggt
     8281 tggatctgta tcccgggccg cgaagagcgc gctgcccttg accgcgagat cgcgcggctg
     8341 cagcgagaca atgtggtctt gaaaaacgct ttgcttgagc acggcctgcc gttgccgaac
     8401 gaaatgaaga cggacgcgga cgcggcagta ccggcggagt ccataccgcg tcccccgcaa
     8461 tcggttccgc cagccgctcc agcatcgccg aaatcggccg actcggaccg tgcatcgcgc
     8521 gacgacgccg aacttgagcg cgtcatgaac gctatggaaa aactctggag acgtctcgtc
     8581 gaaatgatgg tgaacatcca gcgcgatgtg ctcaagaagg gatgagcggc cggtccggcg
     8641 gcgcgccgca aacaagaaat gtcatgaatc ggctctccgc tatcgcggtt acagctcccg
     8701 aattgatcat cgccgcaaca cttgcgatcg agacgcgcgg ggagggattc gtcgagatca
     8761 cgcaagacat taaagatttc atcgcgacca ccggcgcggg cgacggcatt ttgctgttgt
     8821 tcatccgtca cacctcggcc tcgttagtga tccaggagaa tgctgatccg gacgttcgca
     8881 tcgatctcgg taccgcgctg aaccgccttg cgccggtcgc tgccggctgg attcacgatg
     8941 ccgaaggggc ggacgacatg ccggctcacg tgaagaccat gttgaccggc gtttcgcttc
     9001 acattccggt tcgcgagggc atcctcgaac ttgggacgtg gcagggcgtt ttcgtggctg
     9061 agcatcgcgc gcagccgcat cgtcgcgaag tggtattgcg gtacgtcggc ggacggcgcc
     9121 gcagtgcgtg atcggatatt ggccggagca ccggcaacca tcggagaacc cgagcagatt
     9181 tcgataaagc agaaaccttt cgctgcgtcg ttctcgcgag cagcccagtg gcgaaatcta
     9241 tgcctcttgc atcggcaaca atgcggttac aaaatagtca caattttgag gaaccgaccg
     9301 caaaaggcac ggatcaggcg tgggcgcatc gcactaccgg ctggtaatcg ccgatgatca
     9361 tccgttgttc cgcggcgcat tacgcgaggc ggtgagtggg ctattcgaac gcgacgtcat
     9421 cgccgaggcg ggctcgttcg acgacatttc caagctgctt gaccgcaaca acgatgtcga
     9481 cctcgtcctg ctcgaccttg ccatgccggg tatacgtggc ttctccggcc tcatgtacat
     9541 gcgggcacag tatcccggca ttccggtggt aattgtatcc ggcaacgacg atccggcggt
     9601 gattcggcgt tgcatggaat tcggcgcgtc cgggttcatc cccaaaacgc tcggcgttga
     9661 ccagatccgc aaggcgatcg agcaggtgct cgccggcgaa atttggaccc cgcccgatgt
     9721 tgatctctgc gccagatccg acgacgacag cgccgccata ctggctcggc tggcctcgct
     9781 cacgccccag caggtgcgcg tgctcatgat gctgtcggaa gggctgctta acaagcaaat
     9841 cgcctatgag ctgagcgtct ccgaggcgac cgtcaaggcg cacgtatcgg cgatcctgca
     9901 gaagcttggc gttgaaagcc gcacccaggc cgttatcgtg gccgccaaga ttgaagtcgg
     9961 tcattggccg caagcaccgt cgccggactc tcattgaccg ccacgtcatc actcggcggc
    10021 cgcgaaccga tgcgcggtcc attgcgacat gatggcacgc aaggacgccg gcttgagcgg
    10081 cttatggagc atttggatgg tgagcgcgcg tgcagcctcg cgcacctccg gggagcgatc
    10141 ggccgtgatg agcacggctg gaatttccgc tccgaagagc cgccgcagct cagtgaccgc
    10201 ttcgataccg ttgccgtggt cgagatgata gtcgaccaga agcccgcccg ggaacttgcc
    10261 agcggcccgc aaggtcgcaa cggcttccgc cagatcggcc gcctgaatcg tctcgcatcc
    10321 ccagcctcgc agcaacgtca ccatcccgtc caggacattg ggatcgttat cgatacagag
    10381 cacgagaatt tcggcgatgc ggccgcggtc gatgcgcggc tccggcagac gcgtctcgcc
    10441 cagctccgtc ggcgcaaccg gaacgtcaat cgaaaaatgt gtacctcggt cgacctccga
    10501 agtgagtgca atcggatgat cgagaacacg ggcaatgcgt tccacgatcg agaggccgag
    10561 cccgagaccg cgggcgacct tggcgccctg gtcgaggcga tgaaactcgg cgaagacagc
    10621 atggcgtttg tcgggcggaa tgccaatgcc ggtatcgaac acatcgatac gtacatgctt
    10681 gccgcgacgc ctacaaccga ccagaacgcg gccggttcgg gtatatttga cggcgttgga
    10741 aacgagattc tgcagaagcc ggcgcagcaa tcgccgatca gaccgtatgt tgagcgagca
    10801 tggcacgaaa accagatcaa ggccctggtt gcgagcaagt ggcgcgaagt cgaattcgag
    10861 ccggcggagc aactcgtcga cccggaagct tgcaatctcg ggtttcatcg cgccggcatc
    10921 gagccgggag atttcgagca aagccgttag gatatcctcg acggcctcaa gtgaggcgtc
    10981 gatattggca acgagttgcg cctcgccccc accctcccct cgcccgctcg cgggggatgg
    11041 gagggtgggg gcgaggcgtt cgacgaggct tgtgacatag agccgcgcgg cgttcagagg
    11101 ttgaaggatg tcatgactcg cggcggcaag gaatttcgtc tttgacaagt tggcggcctc
    11161 ggcggccgac ttcgccttag cgagttccgt attgagatgc tcgagctcca tggtgcgctc
    11221 gcgcacgcgc cgttcaaggt tctcgttggc ccgggcaagc gcttcggctg ccgcgacgct
    11281 cggcgtgatg tcggtaagcg tggtgacgac gccgccgtcc ggcatgcgat tgacgcgtac
    11341 ctcgatgacg aggccgcgat cgagaaagcg ctccaggaat ggctgcagat cggccgtgta
    11401 gtgtggcagc ctctcgcgca ccagcgcttc gggattccca ggcccgaagg cgccgcgctc
    11461 ggcgttgaag cggagaattt ccgcaaggtt gatgccgatg cgtaaaattt cgtgaggcag
    11521 ttgaagcagt tcgccgaatt gctggttcca gcaaatgagg tgcgtatcct tgtcgaatac
    11581 cgcaataccc tggcgcacat gatcaagcgc agtctgcaga atctcgcggt tgtaatggat
    11641 ggcggcattg gcatcgtcga gcagtcttag cgccgccttg gtggaaaccg tgcgctgacg
    11701 cagcagcaac gacagcacaa ggcgggacga ggctgcaccg atggccgacg ccagaagtcg
    11761 ctccgcgtag cgcaacaact cgaagtccgc ttgggcgccg ggttcgaggc gcatacgccg
    11821 ttcggccgca aatccctcaa acgaggtacg cgtatgctcc tcgcccagaa accggccgac
    11881 cgcagccgtc aattcctcaa ccgtcaccgc cgatcgccaa agcctaaagc ttggagtcgg
    11941 cgtcagcccg cgcggcacga agaggtccgc ctgcatgcgc tcgatggcgg caggctgtcg
    12001 gctcaacgaa accgccacat aggccagaag gttgagggta agactccaca tcatgccgtg
    12061 aaccagtggc ggcaggtcga gcccgaacag tgcctgcggt cgcagggctt cgatcccaaa
    12121 gggtccttcg gctagaaaag tcgtccctaa tgcggaaacg gtgaggctgg gcaacagcag
    12181 cgtgtaagcc cataccagga tgccaaccgt catgccggca agggcgccgc cggcggtggc
    12241 gcgccgccac atcaaaccgc caaaaaatgc cggggcaagt tgcgcgatgg cggcgaacgc
    12301 catcagcccg atggcggcaa gctgggcttc cccagccgag cgataataga gatacgcgaa
    12361 cagcagcacg gcgaagatgg caattcgacg tattgtcaac agatgagcgc cgacgttggt
    12421 gccaagacgc cgggtcagcg cgagcggcac cacgatgtcg ttggatacca tgatggcgag
    12481 ggcgatcgat tcgacgatta ccatggcagc ggctgccgac aggccgccga tgaaggtcgc
    12541 gagcgcgagg acttccgccc cggccgagat cggcagcgca agcacataca tgtcgctgtc
    12601 caccgtaccg ggcgaaaagg tcagcatgcc ggcaatcgcg accggcacca cgaataggtt
    12661 gatgagaaac aggtaaacgg gaaacagcaa ggaagcgcga cggatctcgg attcattctt
    12721 gttctcgacc acggtgacgt ggaactggcg cggcaacagg atgatcgcag ccagcgacaa
    12781 cagtgtcatc gcccccatgg tgccgaagct tgtgccggcg gtcagcaccg cggtcgtatc
    12841 gggacgttcc aatgcctcag caaacagagc aaccggaccg tcgaacatta cgaatgtcac
    12901 gaagatgccc acggccacga aggccacgag tttgacgatc gattcgacgg cgatcgccaa
    12961 catgagaccg tgctgatgtt cggtggcatc gatatgccgc gtgccgaaca ggaccgcgaa
    13021 ggcagcgagc gacatggcga caaacagcgg aggatcgcca agcatgggct gcaccgggcc
    13081 cgcccatgtg gcgaggggtg ccacgatcgt gtcgagcgag gacgatacag ctttgagctg
    13141 aagcgcgatg taggggatca tgccgatgat cgcgatgatc gccacggtcg ccgccacgcc
    13201 ctgatgtttg ccatagcgcg cgccgataaa atccgcgatc gagacgatgt tctgcgcttt
    13261 ggaaaggcgg gtgatgcgcg cgatcagcgg ggaggccagc ccgatcatcg cgacgggacc
    13321 gatgtagatc gccaggaaat caaatcctgt ccgcgtggcg aggccgaccg agccgaaaaa
    13381 tgtccaggac gtgcagtata ttgcgagcga caaagggtaa atcagcggtc gcggacgatc
    13441 tgtcgcgccg agcctagctc tgcggtcgcc atagctcgcg atgatgaaca acagcccaat
    13501 ataaacgagt gcgatgacaa tgacgaacca gccctgcagc atgcggttct gttgctccaa
    13561 ccggctgcca ggacggcaca agctcggcgt acacccgaaa ggtcaacaca actcggcttt
    13621 gatgtccacc tgggcactcc a
//
LOCUS       DATILV010000026         2332 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2817772, whole genome shotgun sequence.
ACCESSION   DATILV010000026 DATILV010000000
VERSION     DATILV010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2332)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2332)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2332
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2817772"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            197..541
                     /locus_tag="VLJ17_00480"
     CDS             197..541
                     /locus_tag="VLJ17_00480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSV21483.1"
                     /translation="MYTHPQRRTDKLTQRLRSEAGLWLRDLREKCGVSQRELAQKVGA
                     EYYTFISQLENGRGRIPPDRYLVWASALGVEPREFVRGLMYYYDPVTYQIIFGPQSQA
                     PTKKAFARRSRS"
     gene            933..1331
                     /locus_tag="VLJ17_00485"
     CDS             933..1331
                     /locus_tag="VLJ17_00485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21484.1"
                     /translation="MSRSVVYLSGPRRRRGNWASEDLAQFRRAAGILRHLGLSIDIDN
                     GMTDEGDPWFVFCHADSGDVIAHCARINGIYVVCAPCLKASLQGLVLPALLERLLQGL
                     VPWPRHVGAAPPPHLLVPERPPRHFEGKRH"
     gene            2050..>2332
                     /locus_tag="VLJ17_00490"
     CDS             2050..>2332
                     /locus_tag="VLJ17_00490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012252820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSV21485.1"
                     /translation="MYTHPQRRSDKLTHKLRVEAGQWLRELREKRGLSQRELAQKVGA
                     EYYTFISQLENGRGRIPPDRYLDWASALGVDKREFVRGLMYYYDPVTYRI"
BASE COUNT          480 a          651 c          712 g          489 t
ORIGIN      
        1 gcatctatca tttctgttta ttgtggcata atgtattgcg ttttttatga cagttcatag
       61 cttatgatgt aatgtctgga gtttaaggtg atagaaggcc cactgctgac agcgactggt
      121 gtcgggggat tgaactcaca acggtgcggg ccgaatgccc ggcaatacca atcgacgtga
      181 atggatgttg cgacccatgt atacccatcc ccagcgacga acggacaagc taacacaaag
      241 actgcgaagc gaggcggggc tatggctgcg cgatctcaga gagaagtgcg gcgtgtccca
      301 gcgcgaattg gctcagaagg tcggagcaga gtattacacg ttcatttcgc agctcgagaa
      361 cggccgaggt cgtatcccgc cggaccgtta tctcgtttgg gctagcgcct tgggcgtcga
      421 gcctcgtgaa ttcgttcgcg ggctcatgta ctactatgac ccggtgactt atcagatcat
      481 cttcggacca cagtcccagg ccccgaccaa gaaggccttc gcccgccgca gtcggtcgta
      541 acgaggtcaa ggcgctcgca gtcgtctcgt ggcgacagct gacgttgggt ctgcgcgcgc
      601 gtctgcatcg gcgctatttt tcctacgacc cgcgatcgac gatgaaggga gacgatacgg
      661 caggtcatcg ccgtccggga gccgtcggca ccgcacaatc gggaatagac gattacgtaa
      721 cgcaattcct tgcaaatctt ttcggtcttg accgcaattt tcttgcgatc gcgcgcagga
      781 cgactatact gcgaatttaa taaaaagaag aacaagcaat agatccaggc tatcgaatat
      841 ttggggggtt gcgagaatat cgcaggggca aaggggagct tggcataggg caaccagtag
      901 cggcatcacg cgccaacgtg ggatggtgta ggatgagtag gagcgtggtt tatttgagcg
      961 gtccgcgtcg ccgtcgcgga aattgggcca gcgaggatct ggcacaattt cgccgtgcgg
     1021 caggcattct caggcatctt ggtctttcca tcgacatcga caacggaatg acggacgaag
     1081 gtgatccttg gttcgttttc tgtcatgccg attccggcga tgtgattgcg cattgcgcca
     1141 ggatcaacgg gatctatgtc gtatgcgccc cgtgcctgaa ggcctcgctt caaggacttg
     1201 tcttgccggc gctgctcgag cgcctgctcc agggcctcgt gccgtggccg cgccacgtgg
     1261 gtgcggcgcc tccgccgcac ttgctcgtgc cagagaggcc gccccgacat tttgaaggca
     1321 aaaggcattg atgagcgtgt gcgctggcgc ggccggagac gcgtgcggcg tgtgacgacc
     1381 cggccggatg tcgtgtggaa aatcagctga cacacgcgtg aacgcgagtt cgccggctgc
     1441 tgacgctgtg ccttccgaca tcgtagtcgg ccgatcaaca ccgccatccc tgaagcggga
     1501 cagctccgcc gagcgaggcc gtcgtcgccc gtacggtgtc accggaaaag ccggataggc
     1561 tgcgacgttt cacggggccg agttttcgcg cggcgatcga attcaattct ctcacagccc
     1621 gcgaattcct gatcggccat ctcagcgacg ccgggcgata gtgaaagccc atgcggtgcg
     1681 caggcgacac gccatacccg ttccgcctcg gtagggggag ccaggccaca aaatcggcca
     1741 cggccgcctc cgattctcct cgggcgtgcc gcaaatatcg gaaataatgg aaataatcat
     1801 gtgacgacat ttcgcgacgt agccagcgcc gctgttttgg cgatcgcttg ttgtacggac
     1861 catttggcgg caagagggcc gtgagatgct ggcttgctac tggcttgctg gtttatgacg
     1921 cgctatacgt atatacgtag ttgtacgcat caagcgacgt ccgcgaaagg ggcgctcgcg
     1981 ccgatctcac ggcgagtccg ccaatgctca aagggcgtca atttgacgtg aatggatacg
     2041 gccagcacca tgtacacgca cccccaacga cgttcggaca agctgacgca caaattgcgc
     2101 gtcgaggctg gacagtggct tcgcgagctg cgggagaagc gcggcttgtc tcagcgcgaa
     2161 ctcgcccaga aggttggcgc tgaatactac accttcattt cgcagcttga gaacggccga
     2221 ggccgcatcc cgcccgaccg gtatctcgat tgggccagcg ccctcggggt cgataagcgc
     2281 gaatttgttc gcggcctgat gtactactac gatcctgtta cctatcggat ta
//
LOCUS       DATILV010000027         2552 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3073606, whole genome shotgun sequence.
ACCESSION   DATILV010000027 DATILV010000000
VERSION     DATILV010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2552
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3073606"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1005)
                     /locus_tag="VLJ17_00495"
     CDS             complement(<1..1005)
                     /locus_tag="VLJ17_00495"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014531340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/NAD(P)-binding oxidoreductase"
                     /protein_id="HSV21486.1"
                     /translation="MTWTRRKFGCFAGAGCLAALGKRVARGQAHARVVVVGGGVGGAT
                     VARYLAASAATLDVTLVEPKERYTTCFFSNFYLAGLRSLESLSHGYERLAQQYGIKVI
                     HDTVTTIDPVVKTVALQGGGKLNYDRAVVAPGIAFEFDAIEGYDEAATQVLPHAWNAG
                     PQTKLLRQQLENMEDGGVFAIAAPPDPFRCPPGPYERACLVAYYFKQFKPRAKIIILD
                     AKDTFFEQDLFEDAWNRHYPGMIEWLPGQFTGGVKSVDVKARMIKTAGETFKVSVANI
                     IPPQMAGELAQRVGLSDKSGWCPIDPITFESKLQPGIHVVGDAISSGEMPKSAFATNS
                     Q"
     gene            complement(1002..1298)
                     /locus_tag="VLJ17_00500"
     CDS             complement(1002..1298)
                     /locus_tag="VLJ17_00500"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HSV21487.1"
                     /translation="MATGMLVLSASRGMAEDDSRGAQLAAICASCHRLDGHDKGIPSI
                     VGLDQKEFVDVMAAFKSGQRSSQIMHTIALSLSDGEIVALAAYLAAQPTGTKHR"
     gene            complement(1406..1720)
                     /gene="soxZ"
                     /locus_tag="VLJ17_00505"
     CDS             complement(1406..1720)
                     /gene="soxZ"
                     /locus_tag="VLJ17_00505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014331371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate oxidation carrier complex protein
                     SoxZ"
                     /protein_id="HSV21488.1"
                     /translation="MPRVQVPSTVTKGEIFQVKALISHQMETGLRHDSEGKVIPRKII
                     NKFVCRYNGLDVFAVDLHEAVAANPYFEFYLRATESGRLDFIWEEDGGGVYSLVQQLA
                     VS"
     gene            complement(1757..2218)
                     /locus_tag="VLJ17_00510"
     CDS             complement(1757..2218)
                     /locus_tag="VLJ17_00510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014766295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate oxidation carrier protein SoxY"
                     /protein_id="HSV21489.1"
                     /translation="MPEESKITDPTRRELLLTGVAGLATTITVSPASASDDATELIER
                     LTRKIPIESDRLHLAMPRTFPNGYTVPLTIEVDSPMTEDDHVKLVRVVAPRNPLIEVA
                     TFHFLPQCSQPRVSTRIRLAEPQHVLAVAEMSDGTLLMAKTWVEVATNGCA"
     gene            complement(2321..>2552)
                     /locus_tag="VLJ17_00515"
     CDS             complement(2321..>2552)
                     /locus_tag="VLJ17_00515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007602475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TCP-1/cpn60 chaperonin family protein"
                     /protein_id="HSV21490.1"
                     /translation="LENDTYAYGFDAQTGEFGDLLGKGIIDPAKVVRAALQGAASIAG
                     LLITTEAMIAEPRDETIPEGHPHPPHGGDIDF"
BASE COUNT          482 a          772 c          754 g          544 t
ORIGIN      
        1 ctgactgttt gtggcgaatg ctgatttcgg catttccccg ctgctgattg catcgccgac
       61 cacgtgaatg ccgggctgca acttcgactc gaacgttatc gggtcgattg ggcaccagcc
      121 agatttatca gacaagccga cgcgctgcgc cagttcgccc gccatttgcg gtgggataat
      181 attggcaacg ctgaccttga aggtctcgcc tgcagtcttg atcatgcggg ctttcacatc
      241 gaccgatttg actccgccgg taaactggcc cggaagccac tcgatcattc ctggataatg
      301 ccgattccag gcgtcctcga atagatcctg ctcgaagaaa gtatccttcg cgtcgagaat
      361 gataattttc gcccgcggct tgaactgctt gaaatagtag gccaccaggc aagcgcgctc
      421 gtagggaccg ggcggacagc gaaacgggtc gggcggagca gcgattgcga aaaccccacc
      481 gtcctccatg ttctcgagtt gctgccgcag caacttggtc tgcggcccag cattccaggc
      541 gtgcggcagg acctgagttg cggcttcgtc gtagccctct atggcatcga attcgaaggc
      601 gatgccgggc gcgactacgg cgcgatcgta attcagcttg ccgccccctt ggagcgctac
      661 cgtcttcacc accggatcga tcgttgtcac ggtgtcgtgg atgaccttga tgccgtactg
      721 ctgcgccaac ctctcatagc catggctgag cgattcgagc gagcgaaggc cggccagata
      781 gaagttgctg aagaagcagg tcgtgtatcg ctccttcggt tcgaccaacg tcacgtccag
      841 tgtcgcggcg ctcgcggcca aatacctggc gacggttgcg ccgccgacgc cacccccgac
      901 caccacgacg cgggcgtggg cttggcctct tgccaccctc ttgccaagcg ccgcgagaca
      961 gccggctccg gcaaagcagc cgaacttacg acgcgtccag gtcatcggtg cttggttcct
     1021 gttggctggg cggcgaggta tgccgcgagc gcgacgatct ccccatcact gagcgaaagg
     1081 gcgatcgtgt gcatgatctg gctggagcgc tgccccgatt tgaaggccgc catgacgtca
     1141 acaaattcct tctggtccag tccgacgatc gaagggatgc ctttgtcgtg gccgtcgagg
     1201 cggtggcacg acgcgcatat tgccgcaagc tgagcgcctc gactgtcgtc ctctgccatg
     1261 ccccggctcg cgctaagaac gagcatgccc gtcgccatga agagcacaat tatttggcgc
     1321 ctcaacgctc ttgcggttcg gcggtgcttt gcggccgagt gcgcctcgct cccggcgtca
     1381 aacagcgcaa cccttaccgc ggtcatcagg acaccgcgag ttgttgcacc agcgaataaa
     1441 cgccgccgcc gtcctcttcc cagatgaaat cgaggcggcc gctctcggta gcgcgcagat
     1501 agaactcgaa ataaggattg gcggcgacgg cttcgtgcaa atcgacggcg aacacgtcga
     1561 ggccgttata acggcagacg aacttgttga tgatcttgcg gggaataacc ttgccttcgc
     1621 tgtcgtgccg caggcccgtt tccatctgat ggctgatcag ggccttgact tgaaaaatct
     1681 cgccttttgt cacagtgctc ggcacttgta cgcgcggcat gggaccgacc ctgttctgcc
     1741 tcacttcaat aacggttcag gcgcaaccat tcgtcgcgac ctcgacccag gtcttcgcca
     1801 ttagcagcgt gccatcgctc atctcggcaa cggccaggac atgttgcggc tcggcaaggc
     1861 gaatgcgcgt cgatacgcgc ggttggctgc attgtggcaa gaagtgaaag gtggcaacct
     1921 cgatcagcgg attgcgcggt gctactacgc gcacgagctt gacatggtcg tcttcagtca
     1981 tagggctgtc gacctcaatc gtgagcggta cggtatagcc gtttggaaag gttcgcggca
     2041 tcgcaaggtg aaggcgatcc gattcaatgg gtatctttct ggtcagccgc tcaatcagct
     2101 ctgtcgcgtc atcgctcgcg ctggcgggcg agacggtgat cgttgtcgct aatcccgcga
     2161 caccggtcaa cagcaactcg cggcgtgtcg ggtctgttat tttactctct tccggcatgc
     2221 cagcactcca tctacattct acaggcgcct agtgtaacta gttgatctga aatcaaacac
     2281 ctaccttcag acgcgttgtt gcggacgcca atcccactgg tcagaagtcg atgtcgccgc
     2341 catgcggcgg atgcgggtgg ccttccggaa ttgtttcgtc acgcggctcg gcaatcatcg
     2401 cttcagtggt gatcagcagt cctgcgatcg aggcagcgcc ctgcaaagcg gcgcgcacga
     2461 ccttggcggg atcgatgatg cctttgccaa ggaggtcgcc gaattcgccg gtctgcgcgt
     2521 cgaaaccgta ggcgtaggtg tcgttctcca ga
//
LOCUS       DATILV010000028         4499 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2818264, whole genome shotgun sequence.
ACCESSION   DATILV010000028 DATILV010000000
VERSION     DATILV010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4499)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4499)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4499
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2818264"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..519)
                     /locus_tag="VLJ17_00520"
     CDS             complement(<1..519)
                     /locus_tag="VLJ17_00520"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acyltransferase"
                     /protein_id="HSV21491.1"
                     /translation="MKRAATLGRLGALEVRLARTSAEIRQAQKLRYDVFYKEMSATAD
                     ATAYFVRRDIDLFDAVCEHLLVIDHGAPKMRKVPAIVGTYRLLRQDIAERTGGFYSAG
                     EFDVESLVARHRDLKFLELGRSCVQPPYRNKRTVELLWHGIWTYVLEHRVDVMIGCAS
                     LDGTDPDRLALPL"
     gene            complement(774..2534)
                     /locus_tag="VLJ17_00525"
     CDS             complement(774..2534)
                     /locus_tag="VLJ17_00525"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV21492.1"
                     /translation="MITIPIGIGALLIMALGTIALLYRANRNLRRRNDTLAARIDALS
                     DREWERQAAHAANHAKSRFLAMASHEIRTPLNGILGMAELLLDTPLSPEQATYAKAVK
                     SSGGTLLSLIEEVLDFSKIEAGRLELDAKPFALRLLVEDTVELLAPRAQAKGIEIASF
                     VDNGLPRCCVGDAVRLRQILLNLVGNAIKFTETGGVSLVVERASHRSIGSTTDVVDFC
                     IRDTGIGIAPQAQGRIFQEFEQADSGSNRRFGGTGLGLAISKRLAKAMGGDIGVQSAP
                     DRGSIFNCTLPLPAIARCDALDIAPKTIPRLTGLEVLIISPAAIEAPLVARQLEVWGA
                     RTSIIASGAAAHDLLSTLRWDAVIVDSALGRRAAERIGQLIGLGVERKLVLVTPADRN
                     DLPALKAAGFTGYLVKPIRAASLAARFGADVGAEQSIEPSVLATEDAAVKQRGGLTIL
                     VAEDNDINALLARNLLLKLGHRPVMATNGSDAVTTCVAASTVGSPFDFVLMDVHMPGM
                     SGIEAVERIRAAERSGGARRTPIIALTADAFSETHDKCRAAGMDGFLTKPLDRDDLVA
                     ALAGRNVAHRIVANSDCMPL"
     gene            complement(2720..3673)
                     /locus_tag="VLJ17_00530"
     CDS             complement(2720..3673)
                     /locus_tag="VLJ17_00530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HSV21493.1"
                     /translation="MPSVDAALIALAGVVLFAAFVNGALGYGFSSLTVPVALVFYTNR
                     VLNPAVVVIEVFINLYVLLINLKGVPAVWKRVLPILIGLLPGIAVGAFVLASLQPGWI
                     KFGTYTVILPLILVQAAGWRRPIRSTWLVGLPFGTALGVLYSVTTISGPPLAILFNNQ
                     GLVKNEFRAGLALVRVAESSVTAIVYYQLGLFIPESESILLLLIPSVVVGIPLGAYLI
                     RRLDAETFRRICMSFDAWVVGFGLSRVLIDLNLMPSPWAYSVMAVTVLIDAYLLYIFF
                     TVLRAGSTQSQTPWRPLTAGVGTPLGPNQCSQPLPGRRALS"
     gene            complement(3741..3914)
                     /locus_tag="VLJ17_00535"
     CDS             complement(3741..3914)
                     /locus_tag="VLJ17_00535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21494.1"
                     /translation="MEFSQMRFLLDLAAVVRDALDRIAVGTEQLVQRQHCGALTISTL
                     PRPQWQWRGRYTK"
     gene            4031..4351
                     /locus_tag="VLJ17_00540"
     CDS             4031..4351
                     /locus_tag="VLJ17_00540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018181094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="HSV21495.1"
                     /translation="MFLLVIDHHGREHALPAVDGWRVMEVIRDWGIGLKASCGGACAC
                     AGCHVYVDQPWVGRLHPPSAEEEDRLDEAFGVEPTSRLCCQILMSSEISGLRVRLAPG
                     SELE"
     gene            4355..>4499
                     /locus_tag="VLJ17_00545"
     CDS             4355..>4499
                     /locus_tag="VLJ17_00545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011084292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase"
                     /protein_id="HSV21496.1"
                     /translation="MDRLDELEAQSIFIFREAFARMKKLALLWSLGKDSNVMIWLARK
                     AFFS"
BASE COUNT          985 a         1302 c         1332 g          880 t
ORIGIN      
        1 tagcggcaac gccagacgat ccggatcggt gccatcgagg ctcgcgcatc caatcatgac
       61 atcgacgcgg tgttccagca cgtaagtcca gatgccgtgc cacaacaatt ctacggtgcg
      121 tttattgcga tagggcggtt gcacgcaaga gcggccgagt tcgagaaact tcaaatcgcg
      181 atggcgcgcc accagggatt cgacatcgaa ttcgccggcg ctgtagaagc cgcccgttcg
      241 ctcggcgatg tcttgccgca acaagcggta agtgccaacg atcgccggta cttttcgcat
      301 cttcggcgct ccgtggtcga tcaccagaag gtgctcgcag acggcgtcaa agagatcgat
      361 gtcgcgccgc acaaaatatg ccgtcgcatc cgctgtggcg gacatttcct tatagaagac
      421 atcgtatcgc agcttttggg cttggcggat ttctgccgat gtgcgcgcga gccgcacctc
      481 aagggcgcca agtcgcccca aggtcgcagc acgtttcatc ttgggatcgg tgacccgaaa
      541 tccactgtag gccttgaata ccggaaccaa tttgccggcg aagcgtagcg acgtgttgaa
      601 ccggctagct ggctggttcg ggttttttgt gcgggaaagc atggtgactt attgtccccg
      661 ttttgcccat ctccccgaga tgcgcaactc cgcgggcgcg cgcttgcgac tcactacgcc
      721 tattgtggcg atatcagtaa accgaaagcc agcacagaat tatgacaagg ccgtcaaagc
      781 ggcatgcaat cagaatttgc gactatgcga tgcgcgacat tgcgaccggc gagcgcagcc
      841 acaagatcat cacggtcgag cggcttcgtc agaaaaccat ccatgccggc ggcccggcac
      901 ttgtcatggg tttctgaaaa tgcgtcggcc gtaagcgcga tgatcggcgt gcgccgtgcg
      961 ccccccgacc gttcggccgc gcgaatccgc tctacggcct cgatcccgct catgcccggc
     1021 atgtgcacgt ccatgaggac gaaatcaaac ggcgagccga cggtgctcgc ggcgacgcaa
     1081 gtcgtgacgg catcgcttcc attcgttgcc atgaccgggc gatgaccgag cttcaggagc
     1141 agattgcggg ccagcaaagc attgatgtcg ttgtcctccg cgaccaagat cgtgagtccg
     1201 ccgcgctgct tcacggcggc gtcttcggtt gcaaggacgg atggttcgat tgattgctcg
     1261 gcgccaacgt ctgcgccaaa ccgtgcggcc aatgaagcag ctcggatcgg cttaaccaga
     1321 tagccggtaa atcctgcggc tttcagggcc ggaaggtcgt tgcgatccgc cggagtcact
     1381 aacaccagct ttcgttccac cccgagtccg atcagctgac cgattcgttc ggctgcgcgg
     1441 cgtccgaggg cgctgtccac gatcacggca tcccaccgca gggtggatag cagatcatgt
     1501 gcagcagcgc ccgaggcaat gatgctggtg cgggcacccc aaacctctaa ctggcgtgca
     1561 accagcgggg cttcgatggc agctggtgaa atgatcaata cctcgagccc cgtcagccgc
     1621 ggtatcgtct tcggtgcaat gtccaacgcg tcacaacgtg caatagcagg taacggcagg
     1681 gtgcaattga agatcgatcc ccggtcgggt gcactttgca cgccaatgtc gccgcccatc
     1741 gccttggcca agcgttttga aatcgcgagc ccgaggcctg tgccgccaaa acgacggttc
     1801 gacccgctgt cggcctgctc gaattcctgg aaaatgcgcc cctgcgcctg gggggcgatc
     1861 ccaattccgg tgtcgcgaat gcagaaatcg acgacatctg tagtgcttcc aattgagcgg
     1921 tgcgatgccc gctcgacgac aagcgaaacg ccgcccgttt ccgtaaattt gatcgcatta
     1981 ccaaccaggt tgagcaaaat ttggcgcaac cgaacggcgt cgccgacaca acagcgcggc
     2041 aggccgttgt caacaaacga ggcaatttcg atacccttcg cctgggcacg cggcgctaaa
     2101 agttcgaccg tatcctcgac cagaagccgc agcgcgaatg gctttgcgtc aagctccagc
     2161 cgaccggcct cgatcttgga aaaatcgagg acctcttcga tcaacgacag cagagtgccg
     2221 cctgaggatt tgaccgcctt ggcataggtc gcttgttcgg gagaaagcgg ggtatcgagc
     2281 aacagctccg ccatgccgag aatgccgttg aggggcgtgc ggatctcgtg ggatgccatg
     2341 gcgagaaatc ggctcttggc gtggtttgcg gcatgtgccg cttggcgctc ccattcccga
     2401 tctgacagag cgtcgatgcg cgccgcaagc gtatcgttgc gacggcgcag gtttcgattt
     2461 gcccgataaa gcagcgcgat cgttccaagg gccatgatca ggagagcgcc gatgccgatt
     2521 gggatcgtga tcatagaccg agattttgat ggtgtttgct tgtcattccc tcctcaggtc
     2581 gacgagccga tgcctctcgt tatcggaatg gctgacggaa agttaacggc gcggtgcgca
     2641 gcgcccgtta tgcatcgttt ccggggtgcg agcggtctga cgccacagtc gaacgccgtt
     2701 ggtgcggata cgtaaagcgt tatgacaaag ccctacgccc tgggagcggc tgcgaacact
     2761 ggtttgggcc tagcggtgtc ccgacgccgg ctgtcagcgg cctccacggt gtttgcgatt
     2821 gcgttgagcc cgctctcagt accgtgaaaa agatgtacaa cagataggcg tctatcagga
     2881 cggtaaccgc catgacgctg taggcccacg ggcttggcat caaattcaga tcgatcaata
     2941 cccgggaaag accgaatccg acgacccatg catcgaagct catgcatatc cggcgaaacg
     3001 tttcggcatc cagccgtcgg atgagatagg cgccaagcgg tattccaacc acaacgctcg
     3061 gaataagcag caataagatg ctctcgcttt ccggtataaa caggccgagc tggtaatata
     3121 cgatggcggt gacgctcgac tcagccacgc gaaccaatgc gagaccggcc cgaaattcat
     3181 ttttgaccag gccttgatta ttgaacaaaa ttgccagagg gggtcctgaa atggtcgtta
     3241 ccgaatacag gacgcccagc gccgtcccaa aagggagacc gaccagccat gtcgaccgaa
     3301 tcggcctccg ccaacccgcc gcttggacca ggatgagggg cagaataacc gtgtaagtgc
     3361 cgaatttgat ccagccaggt tgaagggaag caagaacaaa ggctccgact gcgatgccgg
     3421 gcagcagtcc gataagaatg ggaagcaccc ttttccatac cgcaggaacg cctttcaggt
     3481 tgatgagtag gacgtacaaa ttaatgaaaa cttcgatcac aacgacggcg ggattcagga
     3541 cgcgatttgt ataaaaaacg agcgcgaccg gcacggtaag cgaggaaaat ccatacccaa
     3601 gggcaccgtt cacaaaggcc gcaaacaaga cgaccccggc aagagcgatc aaggcggcgt
     3661 caacggaagg catcttgggc ttctccaatt atcagcgagc ggtcccgaag cgcacggcat
     3721 caaagctcaa ccataaggag tcatttggtg taccggccgc gccattgcca ttgggggcga
     3781 ggcaacgtgc tgatcgtcag ggcgccgcag tgctggcgct gaacgagctg ttcggtgccc
     3841 accgcgatgc ggtcgagcgc atcccgcacc accgcggcaa gatctagcag gaaacgcatc
     3901 tgcgaaaatt ccacgttgac gagaatgatt ttctatatag atatgtaaaa tgcagctcaa
     3961 atagaaaatt ttccttttca acctgaggcc aatcttggaa caagttcccc ctcaagcaca
     4021 acccgatggc attttccttc tcgtgatcga ccatcacggc cgtgagcatg ctttgccggc
     4081 agtcgacggc tggcgcgtca tggaggtcat acgggattgg gggattggtc tcaaggcgag
     4141 ctgcggtggc gcctgcgctt gcgcaggctg tcatgtttat gtggatcagc cttgggtcgg
     4201 gcgtttgcat cctccgtccg ccgaagagga ggaccgactg gatgaggcct tcggggtcga
     4261 accaacctct cggctgtgct gccagatcct gatgtcgtcg gagatcagcg gactgcgggt
     4321 gcgcctggcg cccggatcag aattggagtg acgcatggac cggctcgacg agctcgaagc
     4381 ccaaagcatc ttcatcttcc gcgaggcgtt tgcccgcatg aagaagctcg ccttgctgtg
     4441 gtcgctcggc aaggactcca acgtgatgat atggctggcc cgcaaggcct tcttcagtc
//
LOCUS       DATILV010000029         5266 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4608288, whole genome shotgun sequence.
ACCESSION   DATILV010000029 DATILV010000000
VERSION     DATILV010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5266)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5266)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5266
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4608288"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..691
                     /locus_tag="VLJ17_00550"
     CDS             <1..691
                     /locus_tag="VLJ17_00550"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF044283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="UbiD family decarboxylase domain-containing
                     protein"
                     /protein_id="HSV21497.1"
                     /translation="EGPFGEYTGYFGGEQGLKHKVRVTAITHRDTPIFRGTLEGTMPK
                     MLNENSIMSSVQRAALAWNILERSGVPGVTDVHCPPANNGTTLMIQLKQTYRGQAKQA
                     AAAIWGSNAAHLRYKHIWVVNDDIDIHDYGAIDWAFAYRVNAAEDDIVFFPGTFGSAL
                     DPSTRLKFRDTNLYGTGKWTRVLIDATINLDFEPEANYDGDRYPPMVKPDERDWERVD
                     RRWQEYGFKRD"
     gene            693..2336
                     /locus_tag="VLJ17_00555"
     CDS             693..2336
                     /locus_tag="VLJ17_00555"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HSV21498.1"
                     /translation="MLERVPTPYDDRIYGPDWRAWVDPRVPDEIAPTALLLDRHLSTP
                     IEHKAALIVDGAATSYGALARLVAAVSAGLAAHGVVPEDRILLFGTDSLDYVAMWLGA
                     VRAGAIPAVVSDLYKAHELLYFLGDTAARICFIDSEQLGKLAEVAGELPPSLQAVIIR
                     GEPEAGVVAKLACRMVLRFAEIRDADAPAIPPRPRHRNDVTYMFFSGGTTGTAKGITH
                     LAHDFIIVPERHGHFWQYREGDVVFATSKKYFTHGLWPGLLIPLYWGATAVLIRCPPS
                     PAAVLRTIGETGVTKLVTVPTVLKNMIEHIRQSGKKPDFPTLDFVVSASEKIPPEIFS
                     SFQKQFGVELFDSIGSSEITYEWIANRQKEFKRGSLGKPVFGCEVRLVSPDHGDVTEP
                     NVPGEAWIKSKTACFFYWRKYDKSRETFIGEWTRTGDNLTFDEDGFFWFSGRNNDMFK
                     VKGLWVTPIEIEAALTGHPAVREAAVVSFTDSDGFTKPMAYVVLREGYGEGTALIVEL
                     CTAVRPLGGYKVPERYVFIDELPRTTLMKIDRKSLRQHR"
     gene            2522..4096
                     /locus_tag="VLJ17_00560"
     CDS             2522..4096
                     /locus_tag="VLJ17_00560"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HSV21499.1"
                     /translation="MNKRATAMKTLDWRRRDVKDGFILLGLSALIYLAAHVFDLPPKL
                     FQFALDHTDWEIDDVLFVIMMLSVALLFYIERRRRDLVVEVQARCAAEAESYHLARHD
                     PLTGLPNRRFFSEKLDEMLLQGAAAHERTAVLMLDLDGFKAINDVHGHGAGDQALIEF
                     TARINSVLRAGTFLARFGGDEFAIVISKIELDDPLRLAHRVVAALAKPLVVGGVSATL
                     GVCVGISIAPVDGTTREELVRRADLALYRAKADGRSVVRFFELEMDQDMERRALIERE
                     LRAAVAASAVAVHFQPLVTLEKDQIIGFEALGRWTSPSLGPISPQEFIGVAEECGLIG
                     ELGDQLLRIACSEAARWPANLMLAFNLSPIQLRDPGLGLRILAILSETGLDPRRLELE
                     VTESALLSDGDVARSSIDALRAVGVRIALDDFGTGYATMAQLLALRFDKIKIDRSFVD
                     RLGLDQQTGVIVRATIGLAKGLGLASTAEGVETANQLAILRADGCLQAQGFLLGQAVA
                     ASEIPDLLSRELQGVA"
     gene            4356..5069
                     /locus_tag="VLJ17_00565"
     CDS             4356..5069
                     /locus_tag="VLJ17_00565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018265131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione binding-like protein"
                     /protein_id="HSV21500.1"
                     /translation="MIDVHYWTTPNGHKVTIFLEEAGLPYKIFPVNIGKGEQFQRAFL
                     EISPNNRIPAIVDHDPPGGGAPISVFESGAILLYLAEKTGKFMAKDLRTRVQTLEWVF
                     WQMGNLGPMSGQNNHFAHYAVEKLPYAMDRYRNEVNRLYGVLNRRLADRPYLAGDYSI
                     ADMASYPWVVPHERQGQNIADFPNVKRWLDAIAARPAVVRAYALVKDINPAQGGIRTA
                     EERAILFGQTAASVQAAVR"
     gene            5066..5257
                     /locus_tag="VLJ17_00570"
     CDS             5066..5257
                     /locus_tag="VLJ17_00570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21501.1"
                     /translation="MKRRSKGPSKTLLQNFLLAARPAVVRAYALVKDINPAQGGIRTA
                     EERAILFGQTAASVQAAVR"
BASE COUNT         1044 a         1593 c         1590 g         1039 t
ORIGIN      
        1 ggaagggccg ttcggcgagt acacgggtta tttcggcggc gagcagggcc tcaagcacaa
       61 agtgcgagtg acggccatca cgcatcgcga cacgccgatc ttccgcggca cactggaagg
      121 caccatgccg aagatgctca acgagaacag catcatgagc tcggtgcaac gcgccgcgct
      181 ggcctggaac atcctggaac gctcgggcgt gcccggcgtc accgacgtgc attgcccacc
      241 ggccaataac ggcacgacgc tgatgatcca gctcaagcag acctatcgtg gtcaggccaa
      301 gcaggcggcg gccgcaatct ggggctcgaa cgccgcccat ctgcgctaca agcacatctg
      361 ggtggtcaac gacgacatcg atatccacga ttatggcgcc atcgattggg cttttgcgta
      421 tcgggtcaac gccgccgagg acgacatcgt gttctttccg ggcaccttcg gctcggcgct
      481 cgatccctca acgcgcttga aattccgcga caccaatctc tacggtaccg gtaagtggac
      541 ccgcgtgctg atcgacgcca ccatcaatct cgatttcgag ccggaggcaa actacgacgg
      601 cgaccgctac ccgcccatgg tcaagcctga cgagcgggat tgggagcggg tcgaccgccg
      661 ctggcaggaa tacggcttta agcgcgactg acatgctgga acgggtgccc accccctatg
      721 acgaccgtat ttacggcccg gactggcgcg cctgggtcga tccgcgtgta ccggacgaga
      781 tcgcgccaac cgcgctattg ctcgaccgtc atctgagtac gccgattgag cacaaggccg
      841 ccctcatcgt cgatggagcg gcgaccagct atggggcgct ggcaaggctc gtcgccgccg
      901 tgtcggccgg acttgccgcc catggcgttg tgccggaaga ccgtattttg ctgttcggta
      961 ctgacagcct cgactatgtg gcaatgtggc tgggcgccgt gcgcgctggc gccattccgg
     1021 ccgtggtgtc cgatctctac aaggcacacg agcttctcta ttttcttggc gacactgctg
     1081 cgcggatctg tttcatcgac agcgagcagt tgggcaagct cgcggaggtc gccggcgaac
     1141 tgccgccgtc actccaggcc gtcatcatcc gcggggagcc tgaagccggc gtcgtggcca
     1201 agctcgcatg ccggatggtg ttgcggtttg cggagatccg cgacgccgac gcgcccgcca
     1261 tcccgcctcg cccgcgtcat cgcaacgacg tcacctatat gttcttttcc ggcggcacca
     1321 ccggcaccgc caaaggcatc acccacctgg cccatgattt catcatcgtt cccgagcgcc
     1381 acggccattt ctggcaatat cgtgagggcg atgtggtgtt cgccacctcg aagaaatact
     1441 tcactcatgg attgtggccg gggctcctga tcccgcttta ttggggcgcc accgcagtgc
     1501 tgatccgctg tccgccgtcg cccgcggcgg tactgcgcac gataggagaa accggggtga
     1561 ccaagctcgt caccgtgcct accgtgctga aaaacatgat cgagcacatc cggcaatccg
     1621 gcaaaaaacc ggatttcccg acgcttgatt tcgtcgttag cgcttcggaa aagatcccgc
     1681 cggaaatctt ttccagcttc caaaagcaat tcggcgtgga gctattcgat tccattggta
     1741 gttccgaaat cacctatgag tggatcgcca accgccagaa ggaattcaaa cgcggcagcc
     1801 tcggcaagcc ggtgttcggt tgcgaggtgc gcctggtctc gcctgatcat ggcgatgtga
     1861 cggagcccaa tgtgccgggc gaagcctgga tcaaaagcaa gaccgcgtgc ttcttctact
     1921 ggcgcaaata cgacaagtcg cgcgagacct tcatcggcga atggacccgc accggcgaca
     1981 atctcacctt cgacgaggac ggcttcttct ggttctcggg ccgcaacaac gacatgttca
     2041 aggtgaaggg cctgtgggtc accccgatcg agatcgaggc ggcgctcacc ggccacccgg
     2101 cggtgcgcga ggccgccgta gtatcgttca ccgactccga cggcttcaca aagccgatgg
     2161 cctatgtggt gctgcgggag ggttatgggg aaggcaccgc actgatcgtc gagctatgca
     2221 ccgcggtgcg tccgctgggc ggctacaagg tgccggagcg ctacgtcttc atcgatgaac
     2281 tgccgcgcac cacgcttatg aagatcgacc gcaaatcatt acggcagcac cggtgattgc
     2341 cgtacggccg gctcggagca gatatcagca gcgacggcct ggcagcagat aagtcattat
     2401 taacctacat attatcgggg atggcgtttg cccattgccg gttcatcaac ctttgtcgtg
     2461 cataagacac gaaattccag cagggcttca cctcgtgaac agcacttttc tctttccaag
     2521 catgaacaaa cgcgccaccg cgatgaaaac cctcgattgg cgacgccgag atgtgaagga
     2581 tggattcatc ctgctcggcc tttcggcgtt gatctacctt gcggcgcatg tcttcgactt
     2641 accgccaaag ctcttccagt tcgccttgga tcacacggat tgggagatcg acgatgtact
     2701 atttgttatc atgatgttga gtgtggcgct gctcttttat atcgaacgcc gacgtcgcga
     2761 tctcgtcgta gaagtccaag cgcgctgtgc cgcggaggcg gaatcctatc atttggcacg
     2821 gcacgacccg ctgacgggct tacccaaccg gcgctttttt tccgaaaaac ttgatgaaat
     2881 gcttctgcag ggtgcagccg cgcacgagcg gaccgctgtg ctgatgctcg atcttgacgg
     2941 cttcaaagcg atcaacgatg tgcacggtca tggcgccgga gatcaagccc tgatcgagtt
     3001 caccgcccgg ataaactcgg tgctgcgtgc gggaaccttc ttagcgagat ttggaggcga
     3061 cgagttcgca atcgtaatat caaagatcga attggacgac cccttgcggc tcgcgcatcg
     3121 cgtcgtggca gcgctcgcca agccgcttgt tgtcggaggc gtgtcggcga cgcttggtgt
     3181 ttgcgtcggt atcagcatag ctcccgtcga cggcacgacc cgcgaggaac tggtacggcg
     3241 tgccgatttg gcgctttacc gtgcaaaggc agacgggcgc tcggtggtcc ggttttttga
     3301 acttgaaatg gaccaggata tggaacggcg ggcactgatc gagcgggagc tgcgggcggc
     3361 cgtcgccgcc agcgctgttg cggtccattt tcagccgctt gtcacgctcg aaaaggacca
     3421 gatcatcgga ttcgaggccc tcgggcgctg gaccagtccc agtcttggcc caatctctcc
     3481 gcaggagttt attggggtcg ctgaggagtg cggcttgatc ggggagctgg gtgaccagtt
     3541 gctgcgcatc gcttgctctg aggcagcacg atggccggcg aacctcatgc tggctttcaa
     3601 tctctcaccg atccaactgc gcgatccggg actcggattg cgcatcctag cgatcctcag
     3661 tgaaaccggg ctcgatccgc gtcggcttga attggaggtc acagaaagtg ctttgctcag
     3721 cgatggcgac gtggcgcgat catcaatcga cgcattgcgg gccgttggag tgagaattgc
     3781 gctcgacgac ttcggtaccg gatacgccac gatggcgcag ctgctggcgc tgcgttttga
     3841 caagatcaag atcgaccgaa gcttcgtcga caggctcgga ctggatcagc aaaccggcgt
     3901 gatcgtacgt gcgacgattg gtcttgccaa gggacttgga ttggcctcga cggcggaggg
     3961 tgttgagacc gccaatcagc ttgcaatcct gcgcgccgac ggctgcctgc aagcgcaagg
     4021 atttctgttg gggcaggccg tcgctgcaag cgaaatccct gatctgctca gtcgcgagct
     4081 gcagggcgta gcgtagctat cgtagcaatc acggcatgtg ggccatggcg ggaattcccc
     4141 gcccggcatt tcggaaacgc gcccgcagta cactggaatt tctacgcgaa ccgaccttca
     4201 gccgcaccga ccgcgtcgcg tgcatgcctg caacgcgaaa agttgaccag cgttcgagtt
     4261 gcaacgtcgg cgaaatgatc cgatatcacc ttggatttat cggccaagct aatcaaaaaa
     4321 gacccgtgaa gctccaaacc ggaggaacaa gttacatgat cgacgtgcat tactggacga
     4381 cgcccaacgg ccacaaggtt acgatttttc tcgaagaagc cggattgccg tataagattt
     4441 tccccgtaaa tatcggcaag ggagaacagt tccagcgggc attcctggag atttctccca
     4501 acaaccgaat tcctgccatc gtggatcacg atccgccggg cggaggcgcc ccgatctcgg
     4561 tgtttgaatc gggcgcaatt ctgctctatc tcgcggagaa gaccggcaag ttcatggcga
     4621 aagatttgcg aacccgggtg cagacgctcg aatgggtgtt ctggcagatg ggcaatctcg
     4681 gcccgatgtc cggacagaac aatcacttcg cccactacgc agtcgagaag ttgccctacg
     4741 cgatggaccg ctatcgcaac gaagtgaacc ggctctatgg ggtgctaaac cgccgtctcg
     4801 ccgaccggcc ttatctcgcc ggcgactact cgatcgccga catggcgagc tatccgtggg
     4861 tcgtgcccca cgagcgccag ggccagaaca ttgcggattt ccccaatgtg aaacgctggc
     4921 tcgacgccat cgcggcacgg cccgcggtgg tgcgcgccta cgcgctggtc aaggatatca
     4981 accctgccca gggcggcatc cgtaccgcgg aggaacgcgc catcctgttc ggccagaccg
     5041 cagcctcggt gcaggcggcg gtgcggtgaa gcgcagatcg aaagggccgt cgaagaccct
     5101 tctccagaat ttcctgctcg cggcgcggcc cgcagtggtg cgcgcctacg cgttggtcaa
     5161 ggacatcaac cctgcccagg gcggcatccg caccgcggag gaacgcgcca tcctgttcgg
     5221 ccagactgca gcctcggtac aggcggcggt gcgttgatcg gtcgat
//
LOCUS       DATILV010000030         8201 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4608444, whole genome shotgun sequence.
ACCESSION   DATILV010000030 DATILV010000000
VERSION     DATILV010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8201
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4608444"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            610..1422
                     /locus_tag="VLJ17_00575"
     CDS             610..1422
                     /locus_tag="VLJ17_00575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21502.1"
                     /translation="MVCASASALAQDFTAGKTPAQLFSSDCAECHHSPNGLARNRDVR
                     MLASFLREHYTTKSETAGALAVYVSAFAGGAPVARNRGTGVAVPANSASERSQADRRS
                     RSAGEANATADDATKPTEDSAGRHRRTTNLSGEGEKRRVRGDGDILRPPGSVGTTPSR
                     PSAGDSARRDASDPISRLRAYLSSGLGSEEAAKTGSPKARKRHNRSDTAEPATPDVQA
                     TAKTSAAASPPAAAAPSPPATVDATVPAAPPEDDASTASGLPPVTPRPRLEQ"
     gene            complement(1474..2079)
                     /gene="rplI"
                     /locus_tag="VLJ17_00580"
     CDS             complement(1474..2079)
                     /gene="rplI"
                     /locus_tag="VLJ17_00580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015339352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HSV21503.1"
                     /translation="MEVILLERVAKLGQMGEIVRVKDGFARNFLLPQGKALRATKDNR
                     VKYETMKGQLETRNLERRGDAEKVGAKLGGQSFIVIRQASETGQLYGSVSPRDIVAIL
                     TAGGFTVSRSQIALNTPIKNIGLHSVPVALHAEIEVSITLNVARSADEAERIARGENV
                     IAQRDERLVMVTGEAAAAEDFFENPENTKDEEKTTPDTKAE"
     gene            complement(2112..3119)
                     /locus_tag="VLJ17_00585"
     CDS             complement(2112..3119)
                     /locus_tag="VLJ17_00585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2232 domain-containing protein"
                     /protein_id="HSV21504.1"
                     /translation="MSMMQFVLIGVGAGTAAALLFASVTSGVGFILFYLAPLPILIAA
                     LGWSHWAGLAAAVAAAAMLGGVFGIFFFVTFLTSVGAPAWWLGYLALLSRPVANGGVM
                     HTEWYPPGRLVLWAAALGAGIIAGALAMFGADESTIRSGIRGALEQVLRLQTGIPADT
                     PLQFPGVGDADRLIDMLVVVLPPAAAVIATTTLIGNLWLSGQVVKLSSRLRRPWPNLT
                     ALAFPPRAPAFFAGAVAGAFVPNVLGLVASLFAATFAVAFAILGFSVVHAMTRNIDVR
                     RVTTGAVFRPRMIILTVIYVIVVVQGWPILIMMLIGLAETLFGLRARQTAQRPPAAPR
                     T"
     gene            complement(3219..3497)
                     /gene="rpsR"
                     /locus_tag="VLJ17_00590"
     CDS             complement(3219..3497)
                     /gene="rpsR"
                     /locus_tag="VLJ17_00590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004446294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HSV21505.1"
                     /translation="MSFEGGHGGREFGGGGGGARRPFFRRRKTCPFSGANAPKIDYKD
                     VRLLQRYISERGKIVPSRITAVSALKQRELARAIKRARFLGLLPYVIQ"
     gene            complement(3502..3942)
                     /gene="rpsF"
                     /locus_tag="VLJ17_00595"
     CDS             complement(3502..3942)
                     /gene="rpsF"
                     /locus_tag="VLJ17_00595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016917695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HSV21506.1"
                     /translation="MPLYEHVYLARQDLSQQQVDELTAHYKGLIEQMGGNVAKVEYWG
                     VKSLTYRIRKNRKAHFTLLNVDAPPAAISEVERQQHINEDVLRAMTVRVEELEAGPSA
                     MMRKVDRERDRDERRGERRRDRDGPPRGPREDRGDGDDIEMTEH"
     gene            4448..5395
                     /gene="fabD"
                     /locus_tag="VLJ17_00600"
     CDS             4448..5395
                     /gene="fabD"
                     /locus_tag="VLJ17_00600"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HSV21507.1"
                     /translation="MSIAFVFPGQGSQAVGMGKALAQAYPAALRVFDEVDTALGEHLS
                     ALIWEGPADRLTLTENAQPALMAVSMATLRVLETEAGVDPARDLRFVAGHSLGEYSAL
                     AAAGALSIADTARLLRIRGQAMQKAVPVGVGAMAALLGLEFDAVRAVAAEAAQGQVCQ
                     AANDNGGGQVVVSGDRAAVERAVEIAKSQGAKRASMLPVSAPFHCALMQPAADAMALA
                     LATVTIRKPSPPLVANVVARAVSDPPEILHRLVEQVTGTVRWRECVAYMAREGVTRFF
                     EIGAGKVLSGLVRRIAEGASATAIGAPEDVEAFRAVLPV"
     gene            5407..6144
                     /gene="fabG"
                     /locus_tag="VLJ17_00605"
     CDS             5407..6144
                     /gene="fabG"
                     /locus_tag="VLJ17_00605"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006610958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004316 - 3-oxoacyl-[acyl-carrier-protein]
                     reductase (NADPH) activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] reductase"
                     /protein_id="HSV21508.1"
                     /translation="MFDLTGRNALVTGATGGIGGAIARTLHVNGATVTISGTRIEMLD
                     SLAGQLGGRVYVVRCNLADQEDVENLVPAAEAAMGHVDILINNAAITRDNIFMRLKDE
                     DWDQVLAVDLTAAFRLARAAVRGMIRRRFGRIIGITSVVGVTGNAGQANYAAAKAGMI
                     GMTKSLAQEVASRGVTVNAVAPGFIETAMTDALSDKQKEMILARVPAGRLGSPNDVAA
                     AALYLASLEGAYVTGQTLHVNGGMAMI"
     gene            6387..6626
                     /locus_tag="VLJ17_00610"
     CDS             6387..6626
                     /locus_tag="VLJ17_00610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008130699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HSV21509.1"
                     /translation="MSDIGERVKKIVVEHLGVEPDKVTEAASFIDDLGADSLDTVELV
                     MAFEEEFGCEIPDDAAETILTVGDAVKFLEKNAKS"
     gene            6810..8075
                     /gene="fabF"
                     /locus_tag="VLJ17_00615"
     CDS             6810..8075
                     /gene="fabF"
                     /locus_tag="VLJ17_00615"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013913051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HSV21510.1"
                     /translation="MRRVVVTGMGMVTPLGCGVETTWRRLIASESGARKVDTFDVSDL
                     PAQIACMIPRGDGSHGTYNPTDWMEPKEQRKVDDFIAYAMCAATQAIDDAGCAPRTYE
                     EQIAIGVMIGSGIGGIGGIADTALVLKERGPRRVSPFFIPGRLINLASGYVSIAHGLK
                     GPNHAVVTACSTGAHAIGDAGRLIALGDAELMVAGGAESPLDRLSMAGFAACRALSTA
                     FNEEPTRASRPYDRDRDGFVMGEGAGVVVLEELGHARARGARIYAELIGYGMSGDAYH
                     ITAPAQDGDGALRCMTAAIRRAEITPAEIDYINAHGTSTPLGDEIELSAVQRLVGEEA
                     GRISMSSTKSSIGHLLGAAGAVEAIFSILAIRDKVAPPTLNLDHPSVKAVVDLVPHAA
                     REREIDVVLSNSFGFGGTNASLIFRRLHD"
BASE COUNT         1556 a         2468 c         2617 g         1560 t
ORIGIN      
        1 cttccaccat cgatccggaa acagaaccta agcgtttccg aagtttcgca tcacgcccac
       61 caacgagggg acgacccacc cgatccaaac gagacacccc agccaaggcg aaccgcttgc
      121 gctggtttta gggaaaccta ctcgtcttcg gtttgtaacc gttgattcga tctggtgctt
      181 caacctttga tttcatccac tcgtcgcccc gcgacttgat ctttgcgcaa agcgctgagc
      241 aggtaacccc ggagcccctg cggtcgcgcc tcaagcaccc tccctccagc gaggttacac
      301 agtgggtgtc gcctcgcgtt tttctctgtt ttcgccaggg tagcgccgat atctacaatt
      361 gtaacaatga tcagccaatc ccgcaatcca cctgcgcacg cccgcagatt tctggtggct
      421 acgcgcaggt ggggttttag gtgggcaagt gaaggaattt tggctaaatc gtggacgagg
      481 gtgcttacta tcgaaagaat aatctcgcgc agtcgcccga atgcgttatt aaggggaggg
      541 caacgcgacg cttcgaatca aggtggcggg caggtgaatc agatatcgat tatcgttttg
      601 ggatccgcga tggtttgtgc aagcgcttcg gcgctggcgc aagatttcac cgccggcaaa
      661 acgccggcgc agttgttcag ctcggattgt gccgagtgcc atcactcgcc aaacgggctt
      721 gccagaaatc gcgacgtgcg gatgctcgcc agctttctgc gcgagcatta tacgactaaa
      781 tcggagacgg cgggcgcact cgcggtctat gtgtccgcct ttgcgggtgg tgctccggtt
      841 gcgcgcaacc gcggtactgg cgttgcggta ccggcaaaca gcgccagtga gcggtcccag
      901 gccgatcggc gaagccgcag tgcgggcgag gcaaacgcaa ccgcagacga cgccacaaaa
      961 cctaccgaag actcggccgg acgacatcgg cgcaccacca acctgtcggg tgagggtgaa
     1021 aaacgacggg tgcgcggtga cggggacata ttgcggccgc ccggcagcgt tgggacaacc
     1081 ccgtcgagac cgtcggcggg agatagcgcg cgacgcgacg cttccgaccc gatttcgcga
     1141 ttgcgcgcct atttgtcgtc agggctgggc tctgaggaag ccgccaagac gggatcgcca
     1201 aaggctcgca agcgccacaa tcgttcggat accgccgagc ctgctacgcc cgacgtgcaa
     1261 gcaacggcca agacatcagc cgccgcgtcg ccgccagccg ccgccgcgcc gtcgccgccg
     1321 gccaccgtgg atgcgacggt tcctgcggcg ccgccagaag acgatgcctc gacagcttcc
     1381 ggcctgccgc ccgtcacacc gcggccgcgc ttggagcaat agcttcggcc tcctgcgcct
     1441 gacaagaggc tgtcggttga agtaggcgag gacttattcg gccttggtgt caggcgtcgt
     1501 tttttcctcg tccttggtgt tctctgggtt ctcgaagaag tcctcggcgg cagccgcttc
     1561 cccagtcacc atcaccaacc gttcgtcacg ctgcgcaatc acgttctcgc cccgggcaat
     1621 acgctcggcc tcgtcggcgc tgcgggcgac attgagggtg atcgacactt cgatctcggc
     1681 gtgcaaggcc accggcacac tgtggaggcc gatatttttg atcggcgtat tgagtgcgat
     1741 ctggctgcgc gacaccgtaa atccgccggc agtgaggatt gccacgatgt cgcgcggcga
     1801 gaccgagccg tagagctggc cggtttcgga cgcctggcgg atgacaatga agctttggcc
     1861 gccgagcttc gcgccgacct tctcggcatc gcctctgcgc tcgagattac gggtctccaa
     1921 ttgacccttc atggtttcgt acttgacgcg attgtccttg gtggcgcgca aggccttgcc
     1981 ttgcggcaac aggaaattgc gagcgaagcc gtctttgacg cgtacgatct ctcccatctg
     2041 gccgagcttg gccacgcgtt ccagcagaat gacttccatt acggtttctc ctttttgtgg
     2101 ttcggttggg tttaggtcct tggtgccgcc ggcggccgtt gcgcggtttg gcgcgcgcgc
     2161 aagccgaata acgtctcggc aaggccgatc agcatcatga tcagtatcgg ccacccctgc
     2221 acgacgacga tgacgtagat gaccgtaaga attatcatgc gcggtcggaa cacagctcca
     2281 gtcgtgacgc ggcggacgtc gatgtttcgt gtcatcgcat gaacaacgga gaatcccaag
     2341 attgcgaatg cgaccgcaaa cgtcgcggca aataagcttg cgacaagacc gagcacattg
     2401 ggcacgaacg cgccagcaac cgcgccggcg aaaaatgctg gagcacgcgg cggaaacgcc
     2461 aacgcggtga ggttgggcca cggacgccgg agccggctgg acagcttcac gacttgacca
     2521 gaaagccaca aattaccgat cagggttgtg gtggcgatca ccgccgctgc cggcggcagc
     2581 acgaccacga gcatgtcgat taggcgatcg gcgtccccaa cgcccggaaa ctgcaacggc
     2641 gtgtccgcag gtattccggt ctgcaggcga aggacctgtt caagtgcgcc tctgatgccg
     2701 ctcctgatgg tcgattcgtc ggccccaaac attgcgagcg cgcctgcgat tataccggcg
     2761 ccaagggctg cggcccacaa caccaagcga cccggtggat accattcggt gtgcatgacc
     2821 ccgccatttg cgaccgggcg actgagcaac gccaaatagc caagccacca agccggcgcc
     2881 ccaacggagg tcagaaaggt cacaaaaaag aatattccga acacgccgcc gagcatcgcg
     2941 gccgcagcca ccgcagcggc aaggccagcc caatggctcc agcccagcgc cgcgatcaag
     3001 atcggcagcg gcgcgagata aaacaggata aacccgacgc cggacgtcac ggacgcaaac
     3061 agcagcgccg ctgcggtgcc ggctccaacc cctatcagca cgaattgcat catcgacaag
     3121 ctgtcccgct cttggagcgg ttagagacgg atcgacgtcc gccccaacca ttgtcaggga
     3181 tcagtggtca gtcatcagaa agtttgtgat atccctgatc actggatgac gtagggcagc
     3241 agcccaagaa agcgggcgcg cttgatggca cgcgcaagct cgcgctgctt aagcgctgac
     3301 accgccgtga tgcggctcgg cacgatcttg ccgcgttcgg aaatgtaacg ctgcaacagg
     3361 cgcacgtcct tgtagtcgat cttcggcgcg ttagcaccag agaaaggaca tgtcttgcgc
     3421 cgccggaaga acggacggcg tgcgccgcca cctccgccac caaattcacg accaccgtgt
     3481 ccgccttcga agctcatggc gtcaatgctc cgtcatttcg atgtcatcgc catcaccgcg
     3541 atcctcgcgg gggccgcgcg gcggcccgtc gcggtcgcgt cggcgttcac cgcgccgctc
     3601 gtcgcgatcg cgttcgcgat cgacctttcg catcatcgcc gaagggccgg cttcgagctc
     3661 ctcgacccgt accgtcatgg cgcgcagtac atcctcgttg atgtgctgct gccgctcgac
     3721 ctcgctgata gctgcgggcg gcgcgtccac gttcaacaag gtgaaatggg ccttgcggtt
     3781 tttgcggatg cgatacgtaa gggacttgac gccccaatac tccacttttg cgacgttgcc
     3841 gcccatttgc tcgataaggc ccttgtagtg ggccgtcagc tcatcaacct gctgctgcga
     3901 cagatcctgc cgtgccaaat agacgtgttc gtacaatggc atacgagtgc ctctcctcaa
     3961 tttgtgcgcc gatccggcgc caagcccctc gtgcccttcg ggaaggctcg aaagcttaag
     4021 aaggcgggaa cacgggacgt cgaaccatgc ggtcctgccg ctgtcgtttc aaaccagagg
     4081 ccatctttta aggcatgtga ttcgcacaac ggccgtccgt tcagctcccg gccgggatcg
     4141 agcggaagcc gcggttatag atgctttggg ctggaaagca acttgaaagg tgagtcggga
     4201 atgccgattg gtcctcatga catggggaat gtctggcggc tcgatgatat accgaatgcc
     4261 acctggtcga ttttggcggt ttttctcggc taattaccgt ttgaccggcc tctgggggtt
     4321 gctctcggct tgacattggc cggatcggcg gtgtttttcc cgccaaatcg aagggcagca
     4381 gccctcccac acccagagac ggatcgaaac cggcagcggc cacttcggtc gtgaaggaac
     4441 cccaacaatg tcgattgcat tcgtgtttcc gggccagggc agccaagcag tcgggatggg
     4501 taaggcgctg gcgcaggcct atccggcggc gctacgggta ttcgatgaag tagatacggc
     4561 gctcggggag catctttcgg ccctcatctg ggagggcccc gccgacaggc tgacgctcac
     4621 ggaaaatgcc cagccggcct tgatggcggt ctcgatggcg acgctgcgcg tgttagaaac
     4681 cgaggccggc gtcgatccgg cgcgtgacct gcgtttcgtg gccggccact cgcttggaga
     4741 atattcggcg ttggctgccg cgggagcact aagcatcgca gataccgcgc ggctgttgcg
     4801 cattcgcggc caggcgatgc agaaggcagt gccggtcggg gtgggtgcca tggcagccct
     4861 gctgggcctt gaattcgatg ccgtccgggc ggtcgctgcc gaggcggcgc aagggcaggt
     4921 gtgtcaggcg gccaatgaca atggcggcgg tcaggtggtg gtatcgggcg acagagccgc
     4981 ggttgagcgc gctgtcgaaa tcgctaagag ccagggcgcc aagcgcgcct cgatgttgcc
     5041 ggtgtcggcg ccattccact gcgccctgat gcagcccgcc gcggacgcga tggcgctggc
     5101 gctcgccacg gtgacaatcc gcaagccatc gccgccgctg gtcgccaacg tggtggcacg
     5161 cgccgtctcg gatccgccag agatattgca ccgtttggtc gagcaggtca ccggaacggt
     5221 gcgctggcgc gaatgcgtcg cctacatggc ccgggagggc gtgaccaggt tcttcgagat
     5281 cggtgccggc aaagtgctga gcggtctcgt caggcgcatt gccgaagggg ctagcgcaac
     5341 cgcgatcggg gcgccggagg acgttgaggc attcagggcg gtattgcccg tttgaaggat
     5401 ggagcgatgt tcgaccttac gggcaggaac gcactggtaa ccggcgcaac cggcggcatc
     5461 ggcggcgcca tcgcgcgcac gctccacgtc aatggtgcga cggttacgat ttccggaacg
     5521 cgaatcgaaa tgctcgattc gctcgccggt caactgggcg gccgcgttta tgtggtgcgc
     5581 tgcaatctag ccgaccagga agatgtggaa aacctcgtgc cggctgcgga agccgcgatg
     5641 gggcacgtcg atattctgat caacaatgcg gctatcacgc gggacaacat ctttatgcgc
     5701 ctcaaggacg aggactggga tcaagttctc gccgtcgatc tcaccgccgc tttccgcctc
     5761 gcccgtgccg ccgtgcgcgg catgattcgc cgacgctttg gccgcatcat cgggatcacc
     5821 tcggtggtcg gggtgaccgg caatgccggc caagccaatt atgccgccgc caaggccgga
     5881 atgatcggga tgacaaaatc gctcgcccag gaggttgctt cgcgcggcgt caccgtaaac
     5941 gcggtcgcgc cgggtttcat cgaaacggcg atgaccgacg cgcttagcga caagcaaaag
     6001 gagatgattc tggctcgggt gccggcgggc aggctcggat cgcctaacga tgttgccgcg
     6061 gcagcgctct atctcgcttc cctggaaggc gcctacgtga ccggacaaac gctccatgtc
     6121 aacggcggga tggcaatgat ctgacggcgt tgcaacgcgg gttgcggcac cgtgcagggg
     6181 tattttgaga gggcttgcgc aatgctagtc aagccaattg aagtatgata acccccccaa
     6241 gacgactgga cgacgcggcg ggggcgctga gaaaatccga attccggtgt ttccctgttg
     6301 ccgtcggcca cgacgatgcc gcgtctgacc gattgcaaga tcgcttggcg ggccgagcca
     6361 atcaagaggc gcacgaggtt taagaaatga gtgacattgg cgagcgggta aaaaagatcg
     6421 tcgtggagca cctcggggtg gaacccgata aggtgacgga agctgcgagc ttcatcgacg
     6481 accttggcgc cgacagcctc gacaccgtcg agcttgtcat ggcattcgag gaggagtttg
     6541 gttgcgaaat tcccgatgac gccgcggaaa cgatcctgac cgttggcgac gcggtgaagt
     6601 tcctcgagaa gaacgccaaa agctgatcgc tgcgctcaca cgcggagtgc aacggtgccc
     6661 gcctcccgaa ggggatgttt tgacttgcgg ctttcggttg gtcggccgtc gatgcgtcgc
     6721 ggtcaggtcg gccggtgttt gcccgggcgc gatatttgcg cggaaccggc ggcgtcagga
     6781 agtcgtttgc aggccatgcg ggcggattca tgagacgggt cgtcgtgacc ggcatgggaa
     6841 tggttacacc gcttggttgt ggtgttgaga cgacgtggcg gcggctgatc gcaagcgaaa
     6901 gcggtgcacg caaggttgat accttcgacg tgtccgacct gcccgcgcag attgcgtgca
     6961 tgattccgcg tggcgatggc agccacggca cgtacaaccc caccgattgg atggagccta
     7021 aggagcagcg caaggtcgac gatttcatcg cttacgcaat gtgcgcggca acgcaggcaa
     7081 ttgacgatgc gggctgcgcg ccccgcacct acgaggagca gatcgccatc ggggtgatga
     7141 tcggctccgg gatcggtggt attggcggca ttgccgacac cgctttggtg ctcaaggaac
     7201 gaggtccgcg ccgcgtgtcc ccgttcttta tccccggacg cctcatcaat ctcgcatccg
     7261 gctacgtgtc gatcgcccac ggcctcaagg ggccgaatca tgcggttgtc actgcctgct
     7321 ccacgggggc gcacgccatc ggcgacgccg ggcgcctgat cgcacttggc gatgccgaac
     7381 tgatggtagc cggtggggct gaatcgcctc tagatcgctt gtcaatggcg ggctttgcgg
     7441 cctgtcgggc gctttcgacc gccttcaacg aggagccgac gcgggcatcg cggccatatg
     7501 accgcgatcg tgacggcttc gtgatgggcg agggggctgg cgtggtcgtg ttagaggagt
     7561 tggggcacgc tcgcgcgcgc ggcgccagga tttatgcgga actgatcggg tatggtatgt
     7621 caggcgacgc ctatcacatc actgcacccg cccaggatgg cgacggcgcg ttgcgttgca
     7681 tgaccgcggc catccgacgc gccgagatca cgcccgccga aatcgattac atcaatgctc
     7741 atggcacttc gacgccgctc ggcgacgaga tcgaactcag tgcggtgcaa cggctggtcg
     7801 gtgaggaggc tggccgtatt tcgatgtcgt ccactaaatc ttcgatcggc catctgctgg
     7861 gtgccgccgg tgccgtcgag gccatcttct cgattctggc aatacgcgac aaggttgcac
     7921 cgccgacgct caatctcgac cacccgtcgg tcaaggcagt ggtcgacctg gtgccgcatg
     7981 cggcgcgcga acgcgaaatc gatgtggtat tgtcgaactc gttcgggttt ggcggtacca
     8041 atgcgtcgct gatatttcgg cgtcttcacg attgacatcg atttacgcac cacggagtgg
     8101 caatgtaatc gccaaaagga cataattcat cgctgatctg gcgggtgagg gttgggcgcg
     8161 acgctgcgat ggcgttggtt ttgtcgtttt acacgggttg t
//
LOCUS       DATILV010000031        10318 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4096926, whole genome shotgun sequence.
ACCESSION   DATILV010000031 DATILV010000000
VERSION     DATILV010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10318
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4096926"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            136..1023
                     /locus_tag="VLJ17_00620"
     CDS             136..1023
                     /locus_tag="VLJ17_00620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008965146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HSV21511.1"
                     /translation="MSVADDKVARFLEGVPRKRREILTPEGVLLPVDLADHGERAVAL
                     VIDLFIWLCVTALLYVAIIALLVEGKAVEIAVTLILFIAFIVRNLYFAYFELAWQGAT
                     PGKWINGLRVIDRRGGPLTPSAVFARNLTREVEMFLPAGVLLSIGAGGNHWEQLALLA
                     WLGLFTALPLFNRDRMRGGDFIAGTFVIAIPKRMLLADLVESRNRYDFSRQQLAAYGA
                     FELQILEELLRRPRSAQTAALLAEVCGKICAKIAWPTPIPATDVVSFLTEFYSAERAF
                     LERERLFGRHREDKNSRPD"
     gene            complement(1043..1780)
                     /locus_tag="VLJ17_00625"
     CDS             complement(1043..1780)
                     /locus_tag="VLJ17_00625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21512.1"
                     /translation="MTDVAMAGTFRLADVFSKAVAIYGRRFVPFIILTMIASIPDYLA
                     LFAMGSPTGRPDFASFGAARLGLGLVDFATKSLASGAVIYGVVQELRGRAFSVADSIQ
                     IALRRLLPMLGVAICTTLAIAFGVALLIVPGIIWGCMYYVSMPVCVAERAGVFASMSR
                     SSFLTKGYRWQVFGTLLLILVGGLVVGSIIGMVFAMTGPTGMLIYSQALGAIIGSFNG
                     VLISVFYYELRVAKEGIDIDKIARVFD"
     gene            2437..3228
                     /locus_tag="VLJ17_00630"
     CDS             2437..3228
                     /locus_tag="VLJ17_00630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21513.1"
                     /translation="MADLFGKSFSLFGRHFVVFTTLAAVILSPFYLMLLAAVLFRPDG
                     NLGYVVVNLTVMLMLIICPTIANGAMTYGVIQDLSGRPVRILEMLRVLVGRFLPMIGV
                     AIVLLPLVPVSLLLTLIAWGAVAVFFQLVTAEPRYLLGLSVLLLILSYCTYFAAAPVC
                     IAEQAGIGVSLSRSKFLTKGHRWQIFRAFTLIFVCDLIVNVIARMVATRIGAHAGLVG
                     ADTERLIASYLVQAVFLAFIAVVAAVLYRQLRIAKGGSDIASVFD"
     gene            3407..4270
                     /locus_tag="VLJ17_00635"
     CDS             3407..4270
                     /locus_tag="VLJ17_00635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSV21514.1"
                     /translation="MTNRHALVHVALAVATLSLVTTGRAVELDPAAVAYVTPDQFKWR
                     DPTDETATNQTVLHGDPNKPELYIYINKFKPGRFGNPHYHPNDRFITVIDGAAWRGTG
                     SVLDPTHAVRVPKGTFMIDHATKAHWDGTKEESGAYLIAGIGPATNIEIPKSSGPWTG
                     GDPSAATIIFPEQIPWKDHGSFRLAILAGDPDKPGLFVQLLTLPKGTNFSRPHVHPGP
                     LFAAVLSGTWWVGTGNKYDPANLTVPMKQGTFVTHFGNRVHWDGAKDEDVTLLIIGEG
                     PVTTARVDEAR"
     gene            4722..5909
                     /locus_tag="VLJ17_00640"
     CDS             4722..5909
                     /locus_tag="VLJ17_00640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21515.1"
                     /translation="MRDRFSGSMMVTVAIAAAASAAISVSVTQASAQDPAVAGAALKT
                     PWGEPDLQGIWTEEFDTPLQRPLKYANQEFFTEAQRAELDKARSEVLGRFATERDING
                     AYNAATFFSTKHTGARTSKIVDPPNGRIPTLTPEAQKMAAAEREFRLALLQSTDTCKK
                     MLPGCAGGKYDPTTSPRRAEAPPRYNSARMNRNDGPEDSSLPERCLTGGLPEFGGATG
                     SFRRIVQTSGGIAVFYDVGQGQGWQRNIVMDGSPHLPANIRQWFGDSRGHWEGDTLVI
                     DVTNFSPKTDYQGSRENLHLVERWTRTGPTALAYEVTIEDPTVWTRPWTVKQEFSRQS
                     DQENRLYTEPRCLEGNFGLPGLLRGRRVEDVAFAERRGPDPASRDNTGALIDAEVPQD
                     PLQ"
     gene            6213..8351
                     /locus_tag="VLJ17_00645"
     CDS             6213..8351
                     /locus_tag="VLJ17_00645"
                     /inference="COORDINATES: protein motif:HMM:NF040438.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase domain-containing protein"
                     /protein_id="HSV21516.1"
                     /translation="MFDLKRVLALASATAVVLVTEAAEARITRIEIQRIEPAFSGRNF
                     GPTGAYERLIGKAYGEVDPQLPANAIIQDIDLAPQNAKGMVEYATDIDIVRPADRSKG
                     NGILFFNIHNRGNKGGIQLFNADVPLNLAEINNLANPGDGFLQRQGYTMIWFGWQPDV
                     LAGNQRMTMTVPVAHNPDGSPISGLVRSELTTIAPTTTLNLSSGWFTTLITASYPTAS
                     TDNKTPLADGFIPTLSVRSKEQEPRVPIPNTEWSFGTCPQGGNLVVSDTQICYPAGFK
                     PGRLYELIYRAQGPLVLGLGFAAARDLGAFLKAEPKDDDGRDNPAFIKDAKTIVMGSS
                     QSGRFVRTFIHLGFNRDERGRIVFDGAFPHIGGGLMPLNVRFGQPGRAAATEQIDRLY
                     PGASFPFAYGPETDPLTGARRGILDRCLATNTCPKIVHAATALEMWELRQSLGFTDPL
                     GIRDLIEPSNVRSYIMASTQHSAAPLPLAAKEPFGFCQQQPNPNPHTWTARALLQNLA
                     AWIKDGTEPPPSARPTIAAGTLVAPDQVHFPPIPANKYGDVSRPAVHFLRVHNPLHAH
                     DYGEDFRPEQASGLISVDPPKVSQAQYGTLVAQVDADGNDLDGIRNVFVQVPIGTYTG
                     WNLFNKSFYEDGFCTLQGSFIPFARTKAERIATGDPRLSLEERYPSKETYVAAIRKAA
                     EGLVDMRYLLAEDAARLLVEAERDGIRAAP"
     gene            complement(8637..9965)
                     /locus_tag="VLJ17_00650"
     CDS             complement(8637..9965)
                     /locus_tag="VLJ17_00650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006835 - dicarboxylic acid transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate/amino acid:cation symporter"
                     /protein_id="HSV21517.1"
                     /translation="MERSASTKDPTAPARRPWYTILYVHVLIAIGLGVVVGYLNPKLG
                     VALKPLGDGFIALIKMMIGPVIFCTIVHGIASMGDLKKVGRVGIKALLYFEAVSTLAL
                     GIGLIVGEVVAPGKGFDIDPTALDPNAVASYVSRAKEEGIVSHLLAIIPDSFFGALAK
                     GDLLQVLLISILTGFSISLMGEVGAPVVRAIDSAARVFFGIIRIVVRVAPIGAFGAMA
                     FTIGAQGVGALVKLGELILVFYLTSALFVLGVLGAIAYLAGFSILRFIAYIKDELLIV
                     LGTSSSETVLPHMMQKMEHLGASRSVVGLVIPTGYSFNLDGTNIYMTLATLFLAQATN
                     TPLSLSQELGILVIAMITSKGASGVTGAGFVTLAATLAIVPDIPIQSLALLLGIDKFM
                     SECRALTNLIGNGVATIVISRWEGELDAQAVHRMMAHPITRGEELERQAV"
     gene            complement(10135..>10318)
                     /locus_tag="VLJ17_00655"
     CDS             complement(10135..>10318)
                     /locus_tag="VLJ17_00655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21518.1"
                     /translation="RHPLPAFAGALRTQEQRVTLNDFSWIELHAVAMTGRVQLLNPHQ
                     GALRFDRGRRTRYCGC"
BASE COUNT         2149 a         3048 c         3037 g         2084 t
ORIGIN      
        1 tgttcttcct agccgggttg atcgaggggg ggctgcgcca gttgctggct gatactgccg
       61 ggcgctttgc catagccgct ctgaccgccg cggtgtggtt gagctatttc atttttgctg
      121 gtagagggcg aagccgtgag cgtggcagac gataaggtcg cacggttcct cgaaggcgtc
      181 ccgcgcaaac gtcgggaaat actgaccccc gaaggcgttt tactgccggt tgatctcgcc
      241 gatcacggcg aacgcgccgt cgccttggtc atcgatctgt tcatctggct atgtgtgacg
      301 gccctgctgt atgtggcaat catcgcattg ttggttgaag gcaaggcggt cgagatcgca
      361 gtgacgctga ttctgttcat cgcgttcata gtgcgcaacc tttacttcgc atacttcgag
      421 ctggcatggc aaggcgccac accgggaaaa tggatcaatg gtcttcgggt gatcgaccgc
      481 cgcggcggac cgctaactcc gtccgcggtg ttcgcgcgca acctgacccg cgaggtcgaa
      541 atgttcctac cggccggcgt gctgttgtcg atcggagcgg gcgggaacca ctgggagcag
      601 cttgcgcttc tggcgtggct cggacttttc accgccttgc cgctgttcaa ccgtgaccgc
      661 atgcgcggcg gcgactttat cgccggcacc ttcgtgatcg cgatccccaa gcgcatgctc
      721 ctggccgatc tcgtcgagag ccgtaatcgc tacgacttct cgcgccagca gctcgcagcg
      781 tacggcgcct tcgaactgca gattctcgag gaactcttgc gccggccgcg gtcggcccag
      841 accgcagccc tgctggcaga ggtgtgcggt aagatttgcg ccaagatcgc atggccaacg
      901 ccgattcccg cgaccgacgt ggtgagcttc ctgacggagt tctattccgc ggagcgcgcc
      961 ttcctcgagc gcgagcgtct attcggccgg catcgcgagg acaagaacag ccgccctgac
     1021 tgaatcgcgg cagtcctgcc gcttagtcga agacacgcgc aatcttatcg atatcgatgc
     1081 cttcctttgc gacccggagc tcgtaataga acacgctgat gaggacgccg ttgaaagagc
     1141 ctatgatcgc gcccaacgcc tgcgagtaga tcagcattcc ggtcggaccc gtcattgcaa
     1201 agaccatccc gatgatcgat ccaacgacca agccgccgac caggatcaga aggagcgtgc
     1261 cgaacacctg ccagcgatag cccttggtga ggaagctgct gcgggacatg cttgcaaaaa
     1321 caccggcccg ttcggcaacg cacaccggca tggagacata atacatacag ccccatatga
     1381 ttcctggaac gatcagcaag gcaacgccaa aagcgatggc gagcgtcgtg cagatcgcga
     1441 cgccgagcat gggcaacaag cggcgcaagg cgatttggat cgaatcggcc accgaaaatg
     1501 cccggccgcg gagctcctga acgacaccgt agatcaccgc gccgctggca agcgacttgg
     1561 tggcaaaatc aaccaggccc aggcccaacc ttgcagcgcc gaatgaagcg aagtccggcc
     1621 ttccagttgg ggaccccatc gcgaataagg caagatagtc gggaattgat gcgatcattg
     1681 tgagaatgat gaacggcacg aaccgccggc cgtaaatggc aacggccttg ctgaatacat
     1741 cggcgaggcg gaacgttccc gccatggcga catcggtcat gcggtacccc caaatatcta
     1801 tttgatgaaa ctgcctgttt tggcatgaac ccaccacatc gctcgatcgg ccagcgcagg
     1861 gccaaacgtg caacgtgatc cgtcggcgca ttgcgcaagc gcgatgccgt cggcgttcat
     1921 gccacaggtc gcatcgacat ccgccaaagc tgcgatacaa cttggcgcgg tttacgcgcg
     1981 atgtcgaggg ggttcaaggc gccggctatc atagcatggg ccgcctccac ccgagagaaa
     2041 gccgcccgac cacgtctcgt tctatcagac tcttcaccat cgttataacg gtcagccatt
     2101 gacaccggcg cgccgccaag ccgctaatcg gtgttctccc gatggcttcc gtgccggcaa
     2161 cggctgcgtc aggccaacaa gaaacgtgct gccaatttcg tcgaaccggc tcggcgacga
     2221 cctccgtcca cgggtacgcc acgcgatccg aatcggcttt ggctgctcaa gaggcgacag
     2281 ccgatttgac agcaagccat gctctggcac gttttggtct cagttgccgg cacgctgcga
     2341 gcgcgaatcg ttcatcctct gtttcggcga agatagttat ggctggaacc gccgaaccaa
     2401 tgggcgtggc gcttagcgtt gaagggaggt ttccgagtgg cagatttatt tgggaaatcg
     2461 ttcagcttat tcggcaggca tttcgttgtc ttcaccacgc tcgcggcggt tatcctgagt
     2521 ccattctatt tgatgctttt ggcagccgtc ctgttcaggc cagatggcaa cctcggatac
     2581 gtggtagtga acctcacggt aatgctgatg cttatcattt gcccaacgat cgcgaatggt
     2641 gcgatgacct atggcgttat tcaggatctc agtggccggc cggtgcgaat actcgagatg
     2701 ctcagggtcc tggtgggccg cttcctgccg atgatcggcg ttgcaattgt cctgctgccg
     2761 ctggtgcccg tgagcctttt gcttacgctg atcgcgtggg gcgccgtcgc agtttttttt
     2821 cagttggtta ccgcagaacc gcgatatctg ctcggattgt ccgtgctgct tctaatcctc
     2881 agctactgca catatttcgc agcggcgccg gtgtgcatag cggagcaagc cggcatcggc
     2941 gtcagcctct cacgtagcaa atttctcact aagggtcatc gttggcagat tttccgcgcc
     3001 ttcacactga ttttcgtctg cgatctgatc gtcaacgtca tagcaagaat ggtcgccact
     3061 cggattggcg cacatgctgg tcttgtcggc gcagacacgg aaagactgat tgcatcctat
     3121 ctcgtgcagg cagttttctt ggcctttatc gcggtcgttg cagcggtctt gtaccgtcag
     3181 ctgcgcatcg ccaagggtgg ctcagacatc gcgagcgtgt tcgactaaac tgttcaactt
     3241 gaccgagata taacacacgc tgttgttttc cgaccacatc cgctcaagct caagtgtgcg
     3301 gtccccttct tttagcaaac ccgcagacac gctaatgtaa gctcaaatcg ggagcgaccg
     3361 agagcgccat gcgcccgcca aaagcattga cacaagggag agagaaatga ccaatcgcca
     3421 cgctctggtg cacgttgcgc ttgcggttgc aactttgagc cttgtcacca cgggccgcgc
     3481 cgttgaactc gatccggcgg cggtcgccta tgtgacgcct gaccaattca agtggcgcga
     3541 tccgaccgac gagaccgcta ccaatcagac cgttcttcac ggggacccga ataagcccga
     3601 actttacatc tacatcaaca agttcaagcc cggccgcttt ggcaatccgc actatcaccc
     3661 gaacgaccgg ttcatcaccg taatcgacgg agccgcatgg cgaggcaccg ggtcggtgtt
     3721 ggaccccacg cacgcagtgc gggttccgaa gggaacattc atgatcgatc acgccacgaa
     3781 ggcgcattgg gacgggacca aggaggaaag cggtgcctac ctgatcgccg gcataggtcc
     3841 ggcaaccaat attgaaattc caaaaagcag cgggccctgg acgggcggcg atccctcggc
     3901 cgccaccatt atattccctg agcagattcc gtggaaggac catggcagtt ttcggcttgc
     3961 aatcctggcc ggtgatccag ataagccagg cctctttgtg caactgctca ccttgcccaa
     4021 gggcaccaat tttagccgcc cgcatgtcca cccgggtccc ctctttgccg ccgtgctctc
     4081 aggcacctgg tgggttggca ccggtaacaa atatgacccc gccaacctta cggtcccgat
     4141 gaagcaaggt acgtttgtca cccacttcgg caatcgtgtg cattgggatg gcgccaagga
     4201 tgaagacgtg acgcttctga tcatcggcga aggtccggtg acaaccgcgc gagtggacga
     4261 ggcaaggtaa caggcggccg aggcggctcg ccgcgggcgt gttcggctga actggaaaac
     4321 ttgaaccccg ccacttggtt ggccaaagcc gccaaacttg gatatgagat cccaaccagt
     4381 ttgtttcgac aggaaattcg caactgaacc tgcagcgagc gggagcacct ggtgttggca
     4441 tccaatcgtc cggagctgga gatagcccgc cgtgcgcctc cctgcctgtg aatgcggcag
     4501 gccgccttat atcgctcgct ttcggcaccg ccgccggccg ctgacggaag cagtgggcgc
     4561 aaaagggagc aatcgaagac attgcgccgg tacatcacgc aaaatcatct ttttcccgca
     4621 aaccaaaccg cgttacactc ggtcaagtcc acggagggca gttcgggttg gcgagagaat
     4681 ttcgttgcag taacacgctg caagacaaaa gggagatcat catgcgcgac cgtttctcag
     4741 gctcaatgat ggtaactgtc gccattgccg ctgctgctag cgcagccatt tcggtgtctg
     4801 ttacccaagc gtctgctcaa gatccagcag ttgccggcgc ggcactgaaa acgccttggg
     4861 gcgagcccga tctacagggg atttggaccg aggaatttga tacgccctta cagcgccctc
     4921 tcaaatatgc gaatcaagaa tttttcactg aggcgcaacg cgctgaattg gataaggcgc
     4981 gatcggaggt gctcggccgc ttcgcgactg agcgcgacat caacggtgcc tacaacgccg
     5041 cgacattctt ttccacgaag catactggag cgcgcacctc caagatcgtg gatccgccca
     5101 atggccggat tccgactctg acaccggagg ctcagaagat ggcggccgcc gaacgggaat
     5161 ttcgtctcgc gctgttgcaa tcgaccgata cgtgcaagaa aatgttgccg ggttgcgcgg
     5221 gtggaaaata cgacccgacg acctcgccgc gccgcgccga agctcctcct cgctacaata
     5281 gcgcgcgtat gaaccgcaac gacggtccgg aggacagttc gttgccggag cgctgcctga
     5341 ccggcggact gcctgagttt ggcggcgcca ccggcagttt ccgccggatt gtgcagacgt
     5401 cgggcggcat cgcggtcttc tacgacgtgg gtcaggggca agggtggcag cgtaacatcg
     5461 tcatggacgg gagccctcat ctgccggcca acatccgtca gtggtttggt gactcgcgcg
     5521 gccattggga gggtgacacc ctcgtcatcg acgtgaccaa cttcagtccg aaaaccgact
     5581 atcagggctc gcgcgagaac ctgcacctgg ttgagcgctg gacgcgcact gggccaacgg
     5641 cccttgctta cgaggtcacg atcgaagatc cgaccgtgtg gacgcgaccg tggacggtca
     5701 agcaagagtt cagcaggcaa agcgaccagg agaacagact gtataccgag ccgcgctgcc
     5761 tcgaaggcaa ctttggtctt ccggggctgc tgcgtggacg gcgcgtggaa gacgtcgcct
     5821 ttgcagagcg acgaggcccc gatcccgcaa gcagggacaa cacgggggcc cttatagatg
     5881 ctgaggttcc acaggaccca ttgcaataac atattcacgc atggttctct gcgtggctcg
     5941 ggctgaaatt atcggggccc acttagcagt gatggaagcg cccgagtcgc acttcggctt
     6001 cgggcacagg ctgtgtgaaa gcgtatttcg gaactggcag tccttcacgg tgcaccagta
     6061 gttggtgtag cttttgttgg tgagctttcc agcgggatga gccgaatttc cgtgaatttg
     6121 cggcagcgtg ttgcgcacgg cagtacaccg cctttgattg cgggcgccga cgctcggtga
     6181 gtacaaaagt aaattgtcag ggaggaacaa ccatgtttga tttgaagcgg gttttggctc
     6241 tggcctcggc tacagcagtg gtacttgtga ccgaagcagc cgaggcacgc atcacccgca
     6301 tcgaaatcca aaggattgaa ccggcgttct ccggccgcaa cttcgggcca acgggagcct
     6361 atgaacgact gatcgggaaa gcctacggcg aggtcgatcc gcagttgccg gccaatgcga
     6421 tcatccagga tatcgatctc gcaccgcaaa acgcgaaggg catggtcgaa tacgctaccg
     6481 acattgacat agtgagaccg gccgatcgct cgaagggcaa cggcattctt ttttttaaca
     6541 tccacaatcg cggcaataag ggcggtattc agctttttaa cgctgacgtt ccgctcaacc
     6601 tcgccgagat caacaacctc gccaacccgg gtgacggttt tttgcagcgg cagggctaca
     6661 ccatgatctg gttcggttgg cagcccgacg tgctggcggg caaccaacgc atgaccatga
     6721 cggtgccggt tgcgcacaat cctgatgggt ccccgatcag cggactggtt cgcagcgagc
     6781 tgacgacgat cgcgccgacc acgacgctca atctgtccag cgggtggttc acgacgctca
     6841 tcaccgcgtc gtacccgacg gccagcacgg ataacaaaac cccgctcgct gacggcttca
     6901 ttccgacgct ctcggttcgt tccaaggaac aggagccgcg cgtcccgatc ccgaacacgg
     6961 aatggtcgtt cggcacctgc ccgcaaggcg gaaacctcgt ggtgagcgac acgcaaattt
     7021 gttatccggc tggtttcaaa ccaggtcgcc tttatgaact gatttatcgc gcccagggtc
     7081 ccctcgtcct tggcctcggt tttgcggccg cgcgtgacct cggcgcgttt ttgaaggctg
     7141 agccaaagga cgatgacggt cgcgacaacc cggcgttcat caaggatgcc aagacgatcg
     7201 tgatgggcag ctcgcaaagc ggccgtttcg tgcgcacgtt catccacctt gggttcaatc
     7261 gcgatgaacg cggccgaatt gttttcgacg gcgcgtttcc gcacatcggt ggcggcctca
     7321 tgccgctcaa tgttcgattt ggacaaccgg gccgcgccgc cgcaacggag cagattgacc
     7381 gcctctatcc aggagccagc ttcccgtttg cctacgggcc cgagaccgat cctctgactg
     7441 gggcaagaag gggcattctc gatcggtgct tggcaaccaa cacatgcccg aagattgtgc
     7501 atgcggccac tgccctcgaa atgtgggagc tgcgccaatc gctcggcttc accgatccgc
     7561 tcggtatccg cgatctgatc gagccgtcca acgtacgcag ctacatcatg gcctcgacgc
     7621 agcatagtgc ggctccgttg ccgcttgccg caaaggagcc gttcggcttt tgccagcagc
     7681 agccgaatcc aaatccacac acctggacgg cgcgcgcgct cctgcagaac ttggctgctt
     7741 ggatcaaaga cgggacagag ccgccgccga gcgcgcgacc gacaatcgcc gctggaactt
     7801 tggtggcgcc cgatcaagtg catttcccgc cgataccggc caacaaatac ggcgatgttt
     7861 cgcggccggc tgtccacttc ttgcgtgtgc ataatccgct gcacgctcat gattatggcg
     7921 aggatttccg tcccgagcag gcatccggtc tgatctctgt cgatccgcca aaggtttcgc
     7981 aggctcaata tggcacactc gtggcgcagg tcgatgccga cggcaacgac ctcgatggca
     8041 tccgcaatgt cttcgttcag gttccgatcg gcacttacac ggggtggaac ttgttcaaca
     8101 agagcttcta cgaggatgga ttctgcacgc ttcagggaag cttcatcccg ttcgcgcgca
     8161 ctaaggcgga gcggatcgcg acgggtgatc cgaggctttc gcttgaggaa cggtatccct
     8221 caaaggagac gtatgtggcg gcgatccgga aggccgccga aggtctcgtt gatatgcgct
     8281 atttgcttgc tgaggatgcg gcccgcctat tggtcgaggc ggagcgtgac ggaataagag
     8341 cggctcctta gcacaattaa cccaggttct taaaggggca tgcggacagg gtacgctggc
     8401 tcggctcgcg ggcgccgtgc tggcttgggg ctacccggtc ggtgtcgaat ttgccgaaaa
     8461 agccgaattc agatggtcat ctactggacg tcgtatttgt ggtcctcagt tatcttgaac
     8521 gcggcggtcg cgtaaatcga gtttttcagc agcctgcgag ggtcgcgata cggtcgccgc
     8581 gtgaagctcg ggcggcatca acgtcgcacg cactaagcgg cctggaccac ggagggtcag
     8641 actgcctgcc gttcgagttc ttcgccgcgt gtgataggat gcgccatcat tctatgtaca
     8701 gcttgggcgt cgagctcacc ctcccatcgg ctgatcacga tagtggcgac cccgtttccg
     8761 atcagattgg ttagcgcgcg gcattcactc atgaacttgt cgatgccgag caagagtgcc
     8821 agcgattgga tcggaatatc ggggacgata gcgagcgtgg cggcgagcgt cacaaagcca
     8881 gcgccggtga cccctgatgc gcccttcgaa gtgatcatcg cgatcacgag gatgccgagt
     8941 tcttggctca agcttagcgg cgtgttggtc gcttgcgcga gaaatagcgt cgccagcgtc
     9001 atgtagatgt ttgtgccgtc gagattgaag ctatacccgg tcggaatgac gaggccgacg
     9061 actgatctcg acgctccaag atgctccatc ttctgcatca tgtgcggcag caccgtttcg
     9121 gacgaactgg tgcccagtac gatcagaagc tcgtccttga tgtaggcaat gaagcggaga
     9181 atcgagaagc cggcgaggta ggcgatcgct ccgagcacgc ccaggacgaa tagcgcagag
     9241 gtcaggtaga acaccagaat gagctcgccg agcttgacaa gcgcgccaac gccctgtgca
     9301 ccgattgtaa atgccatcgc accaaaggca ccgatcggcg ctacccgcac cacgattcgg
     9361 attattccaa agaacacccg cgctgcggaa tcgatagcgc gaaccaccgg tgcgccgacc
     9421 tcgcccatga gcgaaatcga gaagccggtc aggatagaga tcaacaagac ttgtagtagg
     9481 tcacccttgg cgagagcgcc aaaaaagcta tcaggaatga tcgccaatag atggctgacg
     9541 atgccctcct ccttggcgcg gctgacatag ctcgcgactg cattgggatc gagtgccgtc
     9601 ggatcgatat cgaagccctt gccaggggcg acgacctcgc caacgatcag cccaatgcca
     9661 agcgccagtg tcgacactgc ctcgaaatag agcagtgcct ttatcccgac gcggccgact
     9721 ttcttgagat cgcccatcga agcgatgcca tgcacgatgg tgcagaagat tactggtcca
     9781 atcatcatct tgatgagtgc aatgaatccg tcacccagcg gtttaagcgc cacgccgagt
     9841 ttcggattga gataaccgac gacaacccca aggccgattg cgatcagtac atggacgtag
     9901 agaatagtgt accagggccg gcgtgcgggg gcggtgggat ctttggtgct agccgatctt
     9961 tccatgacac caagcactcc tgtccacttt gaaaatcatg accggttccg aagccggagt
    10021 gatccggatg gagtcggaaa cagcgggctc catttatctt cgcttcagcg ctgcctattc
    10081 aaagcgcctt gcagcacatt ctatccgcgc ggcctctcct tctcggcacg agaatcagca
    10141 accacaatat cgagtgcggc gacctctatc aaacctgagc gcaccctggt gggggttgag
    10201 tagctggacg cggcccgtca tggcaacggc atgcagttcg atccacgaga aatcgttgag
    10261 ggttacgcgc tgctcttgag tcctcagcgc ccctgcgaac gcggggagtg gatgccta
//
LOCUS       DATILV010000032         3128 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1797744, whole genome shotgun sequence.
ACCESSION   DATILV010000032 DATILV010000000
VERSION     DATILV010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3128
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1797744"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..434)
                     /locus_tag="VLJ17_00660"
     CDS             complement(<1..434)
                     /locus_tag="VLJ17_00660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007801268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent malic enzyme"
                     /protein_id="HSV21519.1"
                     /translation="MVQTTNTQSKGHPTGYDLLRNPRLNKGTAFTDAERRKYRLEGLL
                     PPAVTKMELQAARRHTEIGNLGDDLQKYLVLSDLQARNETLFYALLMSDPATYMPLVY
                     TPTVGEACQKFGHIFREARGMYLPISARGRIGEILGNWPEKDV"
     gene            complement(454..1494)
                     /gene="adhP"
                     /locus_tag="VLJ17_00665"
     CDS             complement(454..1494)
                     /gene="adhP"
                     /locus_tag="VLJ17_00665"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014327462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase AdhP"
                     /protein_id="HSV21520.1"
                     /translation="MSKMMQAAVVESLEKPLVLQEVPVPEPGRGEILVRIEATGVCHT
                     DLHAAKGDWPVKPKPPFIPGHEGVGHVAALGPGVRGVKEGDRVGVPWLHTACGACEYC
                     RTGWETLCQSQINTGYSVNGSFAEYALADPAYVGHLPPKLEFGSAAPILCAGVTVYKG
                     LKETEVRPGEWVVVSGIGGLGHLAIQYAKAMGMHVAAVDVYPSKLDLARKLGADLVLD
                     GKADPASEMQSKIGGAHGVLVTAASSKAFEQAYWMLRPHGTMSLVGLPPGRFELPTVE
                     TVLRRITVRGSIVGTRQDLEEALAFAGEGKVTTHFSWDKLSNINAIFDRMEHGGIDGR
                     IVLGMSDIDPTK"
     gene            complement(1570..>3128)
                     /locus_tag="VLJ17_00670"
     CDS             complement(1570..>3128)
                     /locus_tag="VLJ17_00670"
                     /inference="COORDINATES: protein motif:HMM:NF012431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSV21521.1"
                     /translation="CCNELNCGYSAEGYARACGAAAAVVTFSVGGLSAINAVAGAYAE
                     NLPVILVSGAPNTNDRATEHLLHHTLATHDWSYQWEIAKKLTCAAVAITSAADAPHQI
                     DDAIRSALREKKPAYIEIACNIAAAPCATPGPVSALIGEEPSDAETLEAAITAAAKFL
                     HDSQKPVLLIGSKLRAAAAEKQAIELADALGCAVTVMSAAKSFFPEDHPQFAGIYWGA
                     ISTPGAREIVDWADAVVCIGTIFNDYSTVGWTAMPSGGGVLTADQSRVYLDGYDFSRV
                     RLRDFLSGLAHKVQKRDATAVQYKRIRAEPRFESEAAPETKLMRSEIVRQIQSLLTAD
                     TTIIAETGDSWFNGVALKLPGGTRFEVEMQWGSIGWSVPATFGYAVGAPNRRIIAMIG
                     DGSFQLTAQEVAQMIRRKLPVIIFLMNNHGYTIEVEIHDGPYNNIKNWDYAGLVQAFN
                     AGRSWTRHPRHQWWRAGRRDQGRARQPRWANADRMCHRSRRLLVRPHLVGPYGGSRQR
                     ASAPATIMLS"
BASE COUNT          600 a          984 c          917 g          627 t
ORIGIN      
        1 acgtcttttt ccggccagtt gccgaggatt tcgccaatcc ggccgcgggc gctgatcggc
       61 agatacatac cccgcgcctc acggaaaata tggccgaatt tctgacaagc ttcgccgacc
      121 gtcggcgtat agaccagcgg catgtaagtg gcggggtccg acatcagcag tgcgtaaaac
      181 aacgtctcgt tgcgcgcctg aaggtccgac aacacaagat atttttgcag gtcgtcaccg
      241 agattgccga tctccgtgtg ccgacgcgcc gcctgtagtt ccattttggt gacggcaggc
      301 ggcaagaggc cctcgagacg gtacttgcga cgctctgcgt cggtgaatgc cgtcccctta
      361 ttcaaacgcg ggttgcgaag aagatcatac cccgtagggt gtcccttgct ctgagtgttg
      421 gtggtctgga ccatatgatt tccctttctc tgcttacttg gtcggatcga tgtcactcat
      481 gcccagcaca atgcgcccat cgatgccgcc atgttccatg cgatcgaaga tcgcgttgat
      541 attggagagc ttgtcccaag agaaatgcgt ggtgactttg ccttctccgg cgaaggcgag
      601 cgcttcctcc agatcttggc gggtcccaac aatggatccg cgcaccgtta tgcgacgcag
      661 taccgtttcc acggtcggga gctcgaagcg accgggcggt agcccgacca aagacatggt
      721 tccgtgcggg cgcagcatcc aatatgcctg ctcgaacgcc ttcgacgagg cggcagtaac
      781 cagcacgccg tgcgcaccgc caattttcga ctgcatctcg gaggctgggt cggccttccc
      841 gtccaacacc agatcagccc cgagcttgcg cgccaaatcg agcttgctcg gatagacgtc
      901 gacggccgcg acatgcatgc ccatcgcctt ggcgtattgg atcgccaagt gaccgagccc
      961 gccgatgccg gaaacgacca cccactcccc aggcctgacc tcggtctctt tcaatccctt
     1021 ataaacggtg accccagcgc acaggatggg cgctgcggaa ccaaactcca gcttcggcgg
     1081 gagatgcccg acataggccg gatcggccaa tgcgtattcg gcaaagctgc cgttgacgga
     1141 atatcccgta ttgatttgcg actggcagag cgtttcccaa cccgtccggc agtactcgca
     1201 agcgccgcag gccgtatgca gccacggaac gccgacccgg tcgccctctt tgacgccacg
     1261 cacgcctggc ccaagggcag ccacgtgacc gacaccttcg tgacccggaa taaagggcgg
     1321 ctttggtttc actggccagt ctcccttggc agcatgcaaa tcggtgtggc agacgccggt
     1381 cgcctcgatg cgcacgagga tttcgcctcg ccctggttca ggaactggta cctcctggag
     1441 tacaagcggt ttctcgaggc tctcaacgac agccgcctgc atcattttcg acattttcat
     1501 ttctcctcta aaaaaagaac cattgtgtgc ctagcctcac agtggtcgcc gcgaggctat
     1561 gccgagtgat cacgagagca ttattgtggc cggggcggac gcgcgttggc ggctgccacc
     1621 atacggcccc acgagatgag gtcggacgag cagtcgtcgc gatcgatgac acattcgatc
     1681 agcgttggcc catcgtggtt ggcgagcgcg accttgatcg cgtcggccag ctctccacca
     1741 ttggtgacgc ggatgccgcg tccacgaccg tccggcgttg aaggcctgga ccaaaccggc
     1801 gtagtcccag ttcttgatgt tgttgtaggg accgtcgtgg atctcgacct cgatcgtgta
     1861 tccatgatta ttcatcagga aaatgatgac cggcaacttc cgccggatca tttgcgctac
     1921 ctcctgcgcc gtgagttgaa aggagccatc gccgatcatg gcgatgatcc gccggttcgg
     1981 cgcacccact gcgtagccga aggtggccgg cacggaccat ccgatcgaac cccattgcat
     2041 ctcgacctcg aagcgcgtgc cgcctggcag cttcagcgcc acgccgttga accacgagtc
     2101 gccggtctcg gcgataatcg tagtatcggc agtgaggagg gattggatct gccggactat
     2161 ttcggaccgc atcagcttgg tctcgggcgc agcctcgctt tcgaagcgcg gctcggcacg
     2221 gatgcgctta tattgcaccg ctgtcgcgtc acgcttctgc accttgtggg cgaggcccga
     2281 aaggaagtcg cgcagacgaa cccggctgaa atcgtacccg tcgaggtaga cgcggctctg
     2341 atccgctgtc agtacgccac caccgctggg catcgcagtc cacccaaccg tcgagtagtc
     2401 gttgaagatc gtaccgatgc agaccacagc gtccgcccaa tcgacaatct cgcgggcgcc
     2461 cggggtactg atcgcacccc aatagatgcc cgcgaattgc ggatggtctt cgggaaagaa
     2521 gcttttcgcc gcggacataa cagtgactgc gcagccgagc gcatcggcaa gctcgatcgc
     2581 ctgcttctcc gcagcagccg cccgcagctt gctgccgatc agcaacaccg gcttctggct
     2641 atcatgcagg aacttggccg ccgccgtgat ggccgcttcc aaggtttcgg cgtcactcgg
     2701 ctcctcacca atgagcgcgc tgaccggtcc cggcgttgcg cagggcgccg cggcaatgtt
     2761 gcacgcgatc tcgatatagg ccggcttctt ctcccgcaac gcggaacgga tcgcgtcgtc
     2821 gatctgatgg ggagcgtcgg ccgcggatgt gatagcgaca gccgcgcaag taagcttttt
     2881 ggcgatctcc cactggtatg accaatcgtg agtcgcgagc gtatggtgta gcagatgctc
     2941 cgtcgcgcga tcgttggtat tgggagcgcc ggacaccagg atgaccggca ggttctcggc
     3001 gtaggcgcct gcgaccgcat tgatcgcaga aagtccgccg acgctgaaag tgactaccgc
     3061 cgcagccgca ccacatgctc gggcgtatcc ttcggcgctg tagccacaat tcaattcgtt
     3121 acagcagt
//
LOCUS       DATILV010000033        17059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2053853, whole genome shotgun sequence.
ACCESSION   DATILV010000033 DATILV010000000
VERSION     DATILV010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 17059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17059
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2053853"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..238)
                     /locus_tag="VLJ17_00675"
     CDS             complement(<1..238)
                     /locus_tag="VLJ17_00675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018044133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     substrate-binding protein PotF"
                     /protein_id="HSV21522.1"
                     /translation="MRRTYVIATLALVAGALATVNDAPAQRERFVNVYNWSDYVEPTV
                     LDAFTKETGIRVRYDTFDSNDTLETKLLAGKSGYD"
     gene            complement(645..980)
                     /locus_tag="VLJ17_00680"
     CDS             complement(645..980)
                     /locus_tag="VLJ17_00680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011502498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HSV21523.1"
                     /translation="MYGLFGRGSIRDLMPEEVAEGLATDKIMLIDVREPNETARERIG
                     GALLAPLSQFDPIDLPDPQGRMVVFTCASGVRSIKAAEIAQAAGFTYDAHLAGGIKSW
                     KAAGLPVET"
     gene            complement(1039..2877)
                     /locus_tag="VLJ17_00685"
                     /pseudo
     CDS             complement(1039..2877)
                     /locus_tag="VLJ17_00685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011927514.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter Kup"
     gene            complement(3046..3873)
                     /locus_tag="VLJ17_00690"
     CDS             complement(3046..3873)
                     /locus_tag="VLJ17_00690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HSV21524.1"
                     /translation="MARKKGGGHGGGHGWFVTFADLMGLLMSFFVMLVAFSNQDQNKL
                     QIVAGSMRDAFGTQSNVRYSGIIEVPGLPTRPKLKQAQHIPPEEASATPQQDEHDRAE
                     ARGTRLKEDRAFALASASLRQALQDLPEITETSKHVMIEETKEGLNVEIVDQDGRSMF
                     PEGSKEPYERTRKVIEKIAAPLRATPYRIAITGHTSSSKLPARSSYGPWELSADRANV
                     VRRILQEEGVPETHFSQVAGKADTEPLFADDPYIAANRRVTITLTREEPPMPLGFKP"
     gene            complement(3907..4680)
                     /locus_tag="VLJ17_00695"
     CDS             complement(3907..4680)
                     /locus_tag="VLJ17_00695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HSV21525.1"
                     /translation="MDIATGLGLIAGMAVVCTLILMGGDFRMFYDVHALIVIFGGSFS
                     ATLIRFPLSAIFHGLPLGAKFAFTLRRQTQLELIEQLADIAETARKQGPTGLERIEVD
                     DAFLAKGVRLVADGYDATFIRDNLERDRDNFLTHLDEGQKIYRAIGDCAPAFGMIGTL
                     LGMVQMFANMTDPSKLGPFMAVALLATLYGALVANLVCLPIADKLHVKLTDEEINRTL
                     IIDGILMIRESKSPALVREMLIAYLPEKHRHEALEEATA"
     gene            complement(4972..6042)
                     /locus_tag="VLJ17_00700"
     CDS             complement(4972..6042)
                     /locus_tag="VLJ17_00700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21526.1"
                     /translation="MKTSLLVTVGTWAALAVLAQAFGMSTSWGQNGAPHYEVDASWPK
                     PMPDRWVLGGLGGVCVDAQDHVVILNRQDILEGELDAGRMAPAIIEFDPAGNVVNSWS
                     NPDLLDPRLHSCHFDKDHNFWVASAPSGVVQKFTHDGSKLLLRVGKKGVLDSSDGTIK
                     GTPLNSAFAQFHMPSSIFVDRDNGDVYVSDGEGRNSNRRVAVMDREGRFLRQWKPEGM
                     ETVHCMTIGRDGLVYVCNRDNARIQVYDKQGNLQRTIELPWTPVTMPADGKIKQFGGA
                     TVAIDFSPDPEQRYMFVVNQNNAQIDIVDRKSGKQLSSFGSIGKQPGQFDQAHGIAVD
                     SKGNVYVDENRGRRVHKFKIVQ"
     gene            complement(6180..6350)
                     /locus_tag="VLJ17_00705"
     CDS             complement(6180..6350)
                     /locus_tag="VLJ17_00705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21527.1"
                     /translation="MAKFGVVVLSMMLPIGIAASFSQYCLSEREIPYQPWPGLQQYSW
                     QDVAAIETSWYL"
     gene            6967..8463
                     /locus_tag="VLJ17_00710"
     CDS             6967..8463
                     /locus_tag="VLJ17_00710"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018478 - malonate-semialdehyde
                     dehydrogenase (acetylating) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-acylating methylmalonate-semialdehyde
                     dehydrogenase"
                     /protein_id="HSV21528.1"
                     /translation="MREIGHFVGGKEVKGISGRFGDVFNPNTGEVQAKVALANQAEVE
                     HAIGNAAAAQPAWAATNPQRRARVMFRFLELVNRNYDSLAALLSSEHGKTIADSRGDL
                     QRGLEVVEFACGVAHLMKGEYSTGAGPGIDLYSLRQPLGVVAGITPFNFPAMIPMWKF
                     APAIACGNAFVLKPSERDPSVPMRLAALMIDAGLPPGILNVVNGDKEAVDTLLADPRV
                     MAVGFVGSSAIAEYIYSTGCANGKRVQCFGGAKNHMIVMPDADMDQAVDALVGAGYGS
                     AGERCMAVSVAVPVGKKTADALVQRLVPRVEGLKVGPSSDPHADYGPLVTRTHLNKVK
                     SYVDMGVKEGAKLVVDGRGFRLQGYENGNFMGGCLFDEVRPDMRIYKEEIFGPVLCVV
                     RAKDYEEAVRLPSEHEYGNGVAIFTRDGDTARDFTERVNVGMVGVNFAIPVPLSYYTF
                     GGWKRSGFGDLNQHGPDSIRFYTKTKTVTSRWPSGTKEGAEFVIPTMR"
     gene            8873..9067
                     /locus_tag="VLJ17_00715"
     CDS             8873..9067
                     /locus_tag="VLJ17_00715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21529.1"
                     /translation="MNRRQFGTNQQAYPSRGDQNREIGLRAVAAAIRYQGDSNNVERS
                     LLRETPMPAAPTTQSSDHEP"
     gene            9539..10084
                     /locus_tag="VLJ17_00720"
     CDS             9539..10084
                     /locus_tag="VLJ17_00720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21530.1"
                     /translation="MDKTAIVGSSKRRWIGYVATIAAVLLGEFAIAMPAYSSDLYYPR
                     ARYGYGPYAPGPAAYYEGAAYRPSCSPCGCSRCGCIPRCAPPVHCCGSNVVERRWVDH
                     EYVERRFVGGPYYRPYGYAGYQPYGYGYGGPRYGGVPPHLGYGGINYDYGQYPISYEN
                     EYDAPRPPIGIPGPYNVGYVE"
     gene            complement(10181..10327)
                     /locus_tag="VLJ17_00725"
     CDS             complement(10181..10327)
                     /locus_tag="VLJ17_00725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21531.1"
                     /translation="MFNIFSVHIVSLLIAGLSVVAVFVPIPIVSDYAFWFLVAAYVMV
                     AGHR"
     gene            11523..12629
                     /locus_tag="VLJ17_00730"
     CDS             11523..12629
                     /locus_tag="VLJ17_00730"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HSV21532.1"
                     /translation="MRRSSVITTIALVIAVFATDAEAKLDLYVDKSTQQISIIQNGYL
                     LYVWPVSTGRDKFSTPSGVYTPERLERSWFSKAYYNAAMPHAIFFHNGYAIHGSYDIA
                     QLGGPASHGCVRLHPQDAALLFAMVQQEGPGNTTIVVGGDRTPGPSAQRYRGPDDQFG
                     SAYRGDGGIARGDYAPGPRMAPYYNADRMADRSAPRYRGLDDQFGSAYRGDGGIARGA
                     YASNPKMAPYYDADRMADRMAPYYNADRYVEAPGRRRIDNNQFAMRSIYPGVRPPAPR
                     RDAEVPPRPATGPRGSNRPPLATTKLSPKPDHEPDETANHHANASDPVKSPPPASPPP
                     SEPEQASTGYKIFPKSYWAGASWRWRPKSDEEPR"
     gene            13027..13338
                     /locus_tag="VLJ17_00735"
     CDS             13027..13338
                     /locus_tag="VLJ17_00735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21533.1"
                     /translation="MIKQTKHWGAELRSGAISEDPLILSGQIKNAVDEALLENVVNEA
                     WRLMELERNAATPKSARNIEARAMEAYIERRRRLSAQIRTENPFCSEEEIEARLEQFG
                     A"
     gene            13427..14068
                     /locus_tag="VLJ17_00740"
     CDS             13427..14068
                     /locus_tag="VLJ17_00740"
                     /EC_number="2.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006933612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043295 - glutathione binding [Evidence
                     IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HSV21534.1"
                     /translation="MPEYQLYCFAQSGNAYRVALMLNLIGADWTPIFVDFFAGGESRT
                     PKFRTEVNEMGEVPVLVHGARKLSQSGVCLTYLADRSGDFQPRGEDERLECLRWIIFD
                     NQKVNGFLGPYRFLRNFAPARDPGTEAFLRGRLANNLSIVDKRLTNAPYLLGARPTIA
                     DISLAGYMYYPPEEFDFDIGKDFPAIGAWKERVRALPGWRHPYELMPGYPLVK"
     gene            complement(14102..14665)
                     /locus_tag="VLJ17_00745"
     CDS             complement(14102..14665)
                     /locus_tag="VLJ17_00745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreE"
                     /protein_id="HSV21535.1"
                     /translation="MPRTQKVFTGGARAGASSGSPAGAKIVETLLLKFDDRCKQQGFV
                     FGSKGACIEFDFPAPPCLRTDDLLVLDDGQLVEVVADVEPVLEVRAKDFAAMARLVLT
                     LGNRHVPVQILANRIRLQRLPEIELLVAEHGLESVEMSAPFEPGPHGHTHEHGHDHGH
                     DHGHGHGHHHEHEQCGHDQGQESGRNK"
     gene            complement(14681..15643)
                     /locus_tag="VLJ17_00750"
     CDS             complement(14681..15643)
                     /locus_tag="VLJ17_00750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylcholine/phosphatidylserine synthase"
                     /protein_id="HSV21536.1"
                     /translation="MRYSLPSPFEPGLPPMRGRRFRAVPVRTLVPNVITLLALCAGLT
                     AIRLAAEGTFEWAVYAIVFAAVLDGIDGRVARLLKGTSRFGAELDSLADFVNFGVAPG
                     VTLYFWSLHEVKSAGWIAAMVFAIAAGLRLARFNVMIDDPNRPAWAGNFFVGMPAPAG
                     AITVLLPVYAHFLGVPLPAFIAPVTLVYTLLIGFLMVSRLPVYSGKRVGRRVPPDLVL
                     LVFISVVLFFALLIAYPWAVLTIGALTYLASLPFGWLSHRDYVRRDAEANAQGKSASP
                     QDQVTENVAAPSAPEASEPNPPTPSSENAAVLSFERGGERPSRR"
     gene            15870..16358
                     /locus_tag="VLJ17_00755"
     CDS             15870..16358
                     /locus_tag="VLJ17_00755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HSV21537.1"
                     /translation="MSETMTAKRHKRGGLYFEDFVDGQLFEHRYYRTVTQMDNMLFSN
                     MTLNPQPLHIDRHFCEQETEWGQPLMNSLFTLGLMIGMSVSDMTTGTTIANLGMSEVR
                     FPHPVFEGDTLHATTEVAGKRTSKSRAGAGIVELIHRCYNQDDKLVAECRRSAFILMR
                     PA"
     gene            16358..>17059
                     /locus_tag="VLJ17_00760"
     CDS             16358..>17059
                     /locus_tag="VLJ17_00760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HSV21538.1"
                     /translation="MRSLLFVPADSPGKLGKALGCGADAIILDLEDSIAPERKEAARA
                     GAAEFLAQSLSMPTRPHLIVRVNGLTTGLIDIDLDAVVPARPDAIMLPKAEGGASVVH
                     VDAKLTVREALHGFAEGIIRILPIATETAPALFVAGTYRGASPRLAALTWGAEDLSAE
                     LGAEANRDMQGQFLDPYRLARTLCIAAAAAADVPALDTVYVDFRNEAGLRRECEDARR
                     DGFQGKMAIHPVQVAT"
BASE COUNT         3546 a         5098 c         5071 g         3344 t
ORIGIN      
        1 cgtcgtagcc ggacttgccg gccaacagct tggtttccag tgtgtcattg gagtcgaagg
       61 tatcgtaacg cacccgaatg ccggtttcct tggtgaaagc gtccagcacc gtgggctcga
      121 catagtccga ccaattgtag acattgacga agcgctcgcg ctgtgccggc gcatcgttga
      181 cggtcgcgag cgcccccgca acgagtgcca acgttgcaat cacataggtt ctacgcatcc
      241 gcattccccg ctggatcaaa aggtgaccgg cgagcctcaa tgataagcgg aatcgaatcg
      301 ccgctttacc cgtcgcggtt ccgcaccggg cggatcgact gcataccgga aatttggcct
      361 acaaaaacca ccaacgccgc tgaccgattc ccagcactgc cgcatgcttg taaaggcgca
      421 cgacaagatg ttgctgtcgt catattgggc gcaccatggg agattgtagg cagccattgc
      481 cggctgcggc gcgaacgccg ccgttagcat caggatgatg agggccgcta ctcgcattgg
      541 atttttcctc ttgttggcca tcgagacggt attcgaggat tgcacgaatt cggcatccgc
      601 gccaagcagc ccctgcaaat ttcgatcgca ctaaaaggag ccgatcacgt ctccacaggc
      661 aatccagcgg ctttccagga cttgatgccg cccgcgaggt gagcgtcgta ggtgaatccc
      721 gccgcctggg caatctcggc ggctttgatg gaacgaacgc cggacgcaca ggtgaacacc
      781 accatgcggc cttgcgggtc cggcagatcg atcgggtcga attgcgatag cggcgccagc
      841 agcgcgccac cgatgcgttc ccgcgcggtc tcgttgggct cgcgtacgtc gatcagcatg
      901 atcttgtcgg tggccagtcc ctctgccacc tcttcaggca tcaaatcgcg aattgagccg
      961 cgaccgaaca atccgtacat cagtagaccc cttgccacca ttgcgacaga ccgaacatag
     1021 tcgaagcgga gcgtagactc agatcgtcac ctgggtgccc acctcgacca cgcgaccggt
     1081 gggaatttgg aaatagtccg tggcgtcgtt cgcggcacgc gccagcgaaa tgaagaggcg
     1141 gtcctgccac aacggcatgc cggaacgcgc cgccggacgc aacttacgac gcgacacgaa
     1201 gaacgaggtc gacatgatgt caaattgcca accgagcttg cgggcgatgc caagagcctg
     1261 cggtacgttg ggccgttcca tgtagccgaa ccgcagcgct acccgggaaa acgtctgccc
     1321 gaccggtgtc atgcgcgcac gttcaccatg tggcacgcgc ggcctgtgct cgatctcgat
     1381 ggaaagaatg acgtttttct cgtgcagcac cttgtaatgc ttgaggctgt gcatcagagc
     1441 ggtcggcgcg ctcacaggat cgctggtgag gaacaccgcg gtgccaggaa cgcgctgcgg
     1501 cggtttcttt tccagcatgg cgacgaggtc gcccagcgac atttcctgcc ggcgggtctt
     1561 ctcgaacagc agcttgctgc cgcgccgcca tgtgcacatg atcacgatca tcacactggc
     1621 gagcgtcagc gggaaccagc cgccatcgat cactttcatg aggtttgcgg agagaaacgt
     1681 cgcatccacg acaatgaacg gtacgatcac cgcaatggtc caggcaagcg atcgccccca
     1741 gaccctatga acgacgataa aggcgaggat tgcatcgacc accatcgtcc cggtcacggc
     1801 aatgccgtac gccgatgcga gcgcggttga tgagcggaac agcgcgacca acagcagtac
     1861 gcccaccaaa atcgagttgt tgacgcgcgg catgtagatt tgcccctcgt gctgggccga
     1921 ggtatggcgt atctccagtc gcggcagcag gccgagcgca atcgcctgcc gggtcagcga
     1981 ataggccccg gtgatcacgg cctgactcgc gatgacactc gccgcggtcg ccagcaatac
     2041 catcggcaac cgcaacattt ccggatagag cagaaaaaac ggattctcga tcgccttcgg
     2101 attggcaaga accagcgccc cctgcccaag atagttgcag gtcagcgcag gaaacaccag
     2161 cgccagccat gcggtctgga tcggcttgcg gccgaagtgc cccagatcgg catacagcgc
     2221 ctcggcgccc gtcaccgcaa gaaaaaccgc accgagcgtg acgagcccga taacgccgtg
     2281 cccggacagg aacaacagcc cataggtcgg actgagtgcc aacagaacgc tggggttgga
     2341 cacgatccaa accaatcccg gcaccgccat cgcggtgaac caaaccgtca tgatcggacc
     2401 aaagaagctt gcaacccccg cagtgcctcg cgattgaacg gcaaaaagca ccaccaggat
     2461 cgtcaccgtc aaaggcacga tgtagtggtc gaagctcggc gcaacgacct tcaatccctc
     2521 aatcgccgac agaactgaga ttgcgggggt gattagcgcg tcgccgaaga acagtgacgc
     2581 accgatgatg cccagcatca cgaccaccgg catgtggtcg ccggtggctt tgcgcgcaag
     2641 cgccatcagg gtgagggttc cgccttcgcc gttgttgtcg gcgcgaagca gcacgagaac
     2701 gtatttgagc gtgacgataa tgataagcgc ccacaagatg agcgacagca cgccatacac
     2761 cgccgcgggg gtcggcattg cgtcgggccc ggcggcggcg ttgacagcct cgcggaaggc
     2821 ataaagtggg ctggtgccga tgtccccgta aactacgccg atgctggcaa tggcaagccc
     2881 cagaaacccg gtcgcagatt gggccgaatc ttggccttcc gccttctccg cctcctcgcc
     2941 ccggcgaggg gcggcgatag tttcagacat attaatgaaa gccgatgttg cgtcgcacaa
     3001 agactatcgc ggttgtagca ccaagccggc tgggccgtct acccgctaag gtttgaaccc
     3061 gagtggcatc gggggctcct cgcgggtcaa cgtaatggtg acgcgccggt tggcggcaat
     3121 gtaaggatcg tcggcaaaca agggttcggt gtcggccttg ccggccacct gcgagaaatg
     3181 ggtttccggc accccctcct cctgaaggat ccgccgtacc acgttggcgc ggtcggcgga
     3241 cagttcccat ggtccgtagc tagacctggc aggtagcttg gagctcgaag tgtgcccggt
     3301 gatggcgatc cgatagggcg tcgcccgcag cggtgccgcg atcttctcga tcactttgcg
     3361 ggtgcgctca tatggctcct tcgagccctc gggaaacatg gagcggccgt cctggtcgac
     3421 gatctcgacg ttgagacctt ccttggtttc ttcgatcata acgtgctttg aagtctcagt
     3481 gatttcaggc aggtcctgca aggcttggcg cagcgacgcc gaggcgagcg cgaaggcgcg
     3541 atcttcttta agtcgtgtgc cacgtgcttc cgcccgatca tgttcatcct gctgtggagt
     3601 cgcggacgct tcctcgggtg gaatatgctg agcctgcttg agctttgggc gggtcggcag
     3661 ccccggcacc tcgatgatgc ccgagtagcg cacattgctc tgcgtaccaa aggcgtcgcg
     3721 catcgagccg gccacaatct ggagcttgtt ctggtcctgg ttcgaaaacg ccaccaacat
     3781 gacaaagaag ctcatgagca ggcccatgag gtccgcgaag gtcacgaacc agccgtggcc
     3841 gccgccatgc cctcccccct tcttcctcgc catggcgcaa tcaattcctt tggaccttca
     3901 cggcgatcaa gctgtcgctt cctcgagcgc ttcgtgccga tgcttctctg gcaggtaggc
     3961 aatcagcatc tcgcgcacaa gcgccggact ctttgactcg cgtatcatca aaataccatc
     4021 gatgatcagg gtgcggttta tctcctcgtc ggtcagcttg acgtgcagct tgtcggcaat
     4081 cggcaggcag accagattgg cgaccagggc gccgtaaagc gtcgccagca atgcgactgc
     4141 catgaacggg ccgagctttg acggatcggt catgttggcg aacatttgca ccatgccgag
     4201 cagcgttccg atcatgccga acgccggcgc acagtcgccg atggcgcggt agattttctg
     4261 gccttcatcg agatgggtga gaaaattgtc gcggtcgcgc tccaggttgt cgcggatgaa
     4321 ggtcgcgtca tagccgtcgg ctacaagacg cacacccttg gccaaaaacg cgtcgtcgac
     4381 ttcgatccgc tccaggcccg tcggcccctg cttacgtgca gtttccgcaa tgtcggcaag
     4441 ttgctcgatc aattcgagct gagtctggcg gcgtagcgtg aaggcgaact tggcgccgag
     4501 cgggaggccg tggaaaatcg cgctgagcgg aaagcgaatg agcgttgccg aaaacgagcc
     4561 gccgaaaatc acgatgaggg cgtgcacatc atagaacatg cggaagtcgc cgcccatcaa
     4621 gatcagggtg cagacaaccg ccatcccggc gatcaaccca aggccggtcg ctatatccat
     4681 gaacacactc cggacgccgt acgcacgcgc ccctcctggc catgcgctgt ctattaactg
     4741 gccgcgctta agggagcgtt acagctgcaa aacagggtta atcgcggctt acttccacgc
     4801 tgctcgccgg caactgcccg taaaatgctt ggcgctcaat tttcgatcgc tgagatctgc
     4861 ataaaataaa taacgttatc ggtgcagttc tgggcaacct gatgaaacca gaaaaagggc
     4921 cttcatcctc cccgtcaccc gccttcgcga gtgacgggag gaagacgaag ctcattgcac
     4981 gattttgaac ttgtgcaccc gtctgccgcg gttttcgtcg acgtagacat tgcccttgga
     5041 gtcaaccgca atgccatgcg cctggtcgaa ttgaccgggc tgttttccaa tgctgccgaa
     5101 gctcgacagc tgcttgccgg atttgcggtc gacgatatca atctgcgcat tgttctggtt
     5161 gacgacgaac atgtatctct gctcggggtc gggcgagaag tcgatcgcca ccgtggcgcc
     5221 gccgaactgc ttgattttgc cgtctgccgg catggtcacg ggcgtccagg gcagctcaat
     5281 ggtccgctgg agattgccct gcttgtcgta gacctggatg cgcgcgttgt cgcggttgca
     5341 gacatagacg aggccatctc gcccgatcgt catgcagtgc acggtctcca tgccttcggg
     5401 cttccattga cgcaggaacc ggccctcacg gtccatcacg gcgacgcggc ggttgctgtt
     5461 acggccttcg ccatcggaga catagacgtc gccgttgtcg cgatcgacga agatgctcga
     5521 cggcatgtga aattgagcga acgcggaatt gagcggcgtg cccttgatgg tgccgtcgga
     5581 ggaatccagc acgcccttct tgccgacccg tagcagcaac ttgctgccgt catgggtaaa
     5641 tttctgcacc acgccggagg gcgcggacgc cacccagaaa ttgtggtcct tgtcgaagtg
     5701 gcaactgtgg aggcgcggat cgagcaaatc tgggttgctc cacgaattga cgacgttgcc
     5761 ggccggatcg aactcgatga tcgcgggcgc catgcggccg gcatcgagct ctccctccag
     5821 aatatcctgc cgattgagga tgacgacgtg atcctgggcg tcgacgcaaa cgccgcccag
     5881 gccgcccaac acccatcgat ccggcatagg cttcggccat gacgcatcga cttcatagtg
     5941 aggtgcaccg ttctgccccc acgacgtaga catgccaaac gcttgagcca agaccgccaa
     6001 cgcggcccag gtcccgaccg tgacaagaag gcttgttttc atgatcgcgt ctcctccgct
     6061 cgccaatcga ttgctaggat tcgttgggcc ttcgaatttg gccgttatcg ttattaatgg
     6121 cccgactgcc catcttgcct cgctttcggc ctatgccgca atacgccgcg tgcgccgggc
     6181 tataggtacc aggaggtctc gatcgccgcg acgtcctgcc aggaatattg ctgcagaccg
     6241 ggccagggct gatagggaat ttctcgctcc gacaagcagt attgggagaa cgacgccgca
     6301 ataccgatcg gcagcatcat cgataacacc actaccccaa acttggccaa ttctcgccgc
     6361 gcccaaatag cagccaggcg cgctgtgccg gcgcactcaa tcgaagaaat tgcgtagagg
     6421 tggcaccagt gtgcaaatca attgatggcg aagaacccga atccgatcaa tgccaagaaa
     6481 attggaatga tctggcgagc cgtcgccccc tctcccgagg catagaggaa agtccccccg
     6541 gacagcaccg cgattgcaat gcttgatcag ccatacggca ccggcggaaa tcccaaccat
     6601 cagggcgaag gcgggcacga tgggcaggag gttcgccaag ctcttcctgc gcggcacagg
     6661 aggtgtgcgg ccacgtccta attgtgctgg agcttaccgc aaacgccgga tgccgaatat
     6721 atatcgccga gatatgcccg tctcaaaatt ttcgtaccaa aattagatcg ttgagccgtt
     6781 gggctttctt gttgcataaa tccggtgcag aattacgcga tgacctgcgc cgatgaaagc
     6841 tgcatgtcga ggggtgatgg ctacctcttg cggctcaaat gagcccgggc cgccagactt
     6901 gcgatattgg ccccccgcac gaaagtaaaa gtcggtcgcc accacatgtt tttctaggag
     6961 accacgatgc gcgaaatcgg ccattttgtc ggtggcaaag aggtcaaggg catttctggc
     7021 cgcttcgggg acgttttcaa tcccaacacc ggtgaggtcc aggccaaggt ggcgctcgcg
     7081 aaccaggctg aggtcgagca cgccatcggc aacgcggccg cggcacagcc ggcctgggcg
     7141 gcgaccaatc cgcagcgacg cgcccgcgtg atgttcaggt ttctcgagct cgtgaaccgg
     7201 aactatgaca gccttgccgc gttgctgtcg tctgaacatg gcaagaccat cgcggactcg
     7261 cgcggtgacc tccagcgcgg cctcgaagtg gtcgagttcg cctgcggcgt tgcgcatctg
     7321 atgaagggcg agtactcgac cggcgccggg ccgggcatcg atctctattc gctgcgccaa
     7381 ccgctcggcg tggtggccgg catcacgccg ttcaatttcc ccgccatgat cccgatgtgg
     7441 aaattcgcgc cggcgatcgc ctgcggcaat gccttcgttc tcaaaccgtc ggaacgggac
     7501 ccttcggtgc cgatgcggct cgcggctctg atgatcgatg ccgggctgcc gcccggcatc
     7561 cttaacgtag tcaacggcga caaggaggcg gtcgatacgc tacttgccga tccgcgggtg
     7621 atggcggtgg gtttcgtggg ctcttcggcg atcgccgaat atatctattc aaccggctgc
     7681 gccaacggca agcgtgtaca gtgtttcggc ggtgcaaaaa accacatgat cgtaatgccg
     7741 gacgccgaca tggaccaggc tgtcgatgcc ctggtgggcg ccggctacgg ctcggccggc
     7801 gagcgctgca tggcggtatc ggtcgcagtg ccggtcggga agaaaaccgc ggatgccctg
     7861 gtgcagaggt tggtcccgcg ggtagaaggc ctgaaggtcg gtccctcgtc cgacccccat
     7921 gcggactacg gcccgctggt gacgcgcacc cacctcaaca aggtcaagag ctatgtcgac
     7981 atgggcgtga aggagggcgc taaactcgtg gttgacggtc gcgggttcag gctgcagggc
     8041 tacgagaacg gcaacttcat gggcggctgc ctgttcgacg aggtgcggcc cgacatgcgc
     8101 atctacaagg aggagatttt cggcccagtg ctctgtgtgg tgcgggccaa agattatgag
     8161 gaggcggtgc ggctaccgtc cgagcacgag tacggcaacg gcgttgccat cttcactcgc
     8221 gacggcgaca ccgcgcggga tttcaccgag cgcgtcaatg tgggcatggt gggcgtgaat
     8281 ttcgccattc cggtgccgct gtcgtactac accttcggtg ggtggaaacg ctccggcttc
     8341 ggcgatctca atcagcacgg tccggactcg atccgatttt acaccaagac caaaaccgta
     8401 acatcgcgct ggccctctgg aaccaaggaa ggggcggagt ttgtcattcc gaccatgagg
     8461 tgacggtgcg tgacggcttc ggatcaaatt tagtgagcca caaatataat ataccattat
     8521 accaatatgt cttctttgcc acacttgaga agattttttt actaagctag tataaatttt
     8581 agtttgcaca ttgacttaag ccgcctctgg acgctcaatt caaaccgggc tgaggaacgc
     8641 ttgggacgtg gcacgtatcc cgtttggata gtttggaccg gggcattgag ttaggtcgtc
     8701 gacgtcgcgc tgataactgg cgcagttttg atgaccgtgt tcggtcgccg ttgtgcagac
     8761 ctgtagagcc accagcgtgt gtcggtggcg tgccgtcttt tcgacttccg cctgttcgac
     8821 aactctccaa ccgagcgcag ggggggagct tttattcgat gggagaacct taatgaatcg
     8881 acgccagttc gggacaaatc agcaagccta tccgagtcgt ggtgatcaaa accgtgagat
     8941 cggtctaagg gcggtcgcgg ccgcgatccg ctaccagggt gactccaata atgtggagcg
     9001 ctcgctgtta cgggagacgc ctatgcccgc tgctcccacg acgcagtcca gcgaccacga
     9061 accgtagctc ggatcgaacg cagaatattg ttgcgggacc gcgcgcagcc gttgcctgtg
     9121 catggcctga gtttcagctc ggccatgcag gggactgcga atgaactagc gatcagatcg
     9181 tggacgttcg cagctccgcg gcttgaggaa agggatttcc aggcgaatcg accccagcgt
     9241 cccgtatgaa ttatggctgc ccgcgacatc tttcttaata tatggttaac gcgccaaaca
     9301 agctcgtaca gcaaccgtga acgcgagcgc taaccggctg aaattttcgc acttttcgga
     9361 gttttgtgag cggtgtgacg gcacggctgg tcacgtcgcc gcagactgcg cgtgcccctc
     9421 aacgccgcaa atcgcgcctc tgtcacgcag tccgcctcaa tgtggccgtc gaatgaccca
     9481 ttttggtcgc ttctttttcg cctcaacgcc cgcaaaatgc gcggcacagg aggctgtcat
     9541 ggataaaact gcgatcgtcg gatcgtcgaa gcggcgctgg atcggctacg ttgcaaccat
     9601 cgccgcagtg ctgcttggcg aatttgccat tgcgatgccc gcatatagta gcgacctgta
     9661 ttacccccgt gcgcggtacg gatacggccc atatgcgccg gggccggcgg cctattatga
     9721 aggagctgcg taccgaccgt cttgctcccc atgcggctgc tcgcgctgcg gttgcattcc
     9781 gcgctgtgcc ccccccgtgc actgctgtgg tagcaatgtg gttgagcgcc gttgggttga
     9841 ccacgagtac gttgagcgac gcttcgtcgg cgggccttac tatcgaccct atggctacgc
     9901 aggttatcag ccttatggat acggatatgg gggacctcga tatggaggcg tcccacccca
     9961 tctcggatac ggaggcataa attatgatta tgggcaatat ccgatttcat atgaaaatga
    10021 gtatgacgcc ccgcgaccgc cgataggtat acccggtccc tataatgtcg gttacgtcga
    10081 atagccgacg ctgaaactat tgcgggatta cggagttgac gtcagactcg ggtagacggc
    10141 cggcgggcag cgcggccttt gaggccgcgc tgccacacga tcatctatgc cccgccacca
    10201 tgacataggc ggcgacgagg aaccaaaagg cgtaatcgct cacgatggga atgggcacga
    10261 atactgcaac aactgagagg cccgcgataa ggagcgaaac gatatgtacg ctgaaaatgt
    10321 tgaacatcgc cgatgccctt aagcccgcga aatcagcgcg tgattcaacc gcgcacgggc
    10381 tccgcgtttg caacgaggag tcttgattgg attggagacg agcataacaa cgacatcgct
    10441 atgtcggccg caccccgttg gagccaaaag cgcttctgat tctggcattt ttacggtctt
    10501 aggatggccg acgcagttat ccgtcacaat tcgacgtcgc aattcgacca ggcatcccaa
    10561 atgcaacttc accgaccgac gagatgtcac ccaccatcca tggggtattc caagacttgg
    10621 cctacctgcc ttggggctgc tcgatgacgg gtgccatgaa acaccgctcg ggaagctgga
    10681 tttttcaggt tcggccgcag tttgcttcgg cgccggaggt ggccacggca gtgtgcgtca
    10741 atcggcgccg caagactact tgacacgcat ttgcggcagg tgttgttcca accgtcctca
    10801 ctcaaccgaa gctagaggca acccatgata gtgacagagc agtatgccaa gcggtctatg
    10861 tggtgcccga tggcccgggt gcggtggaca tccagggttg ttgcattcaa tcgctcaaat
    10921 cccggccgct gggaccgggt gaagaacgcg atattccgga ccctttttcc gcggctgcat
    10981 tggctggctc gggcaaagtt cttcagatgc tttggctcgg gatgcatgat gtggagatgg
    11041 tcagacaagg actcgagaat gggattttgc ggactggcgg gaaatccgct gcaaaacctg
    11101 ttttccgatt agttcgcggt caaattgcgc cgacccgcgg ctgtgggtga accaagctta
    11161 cggcggcacg agggcgcttt ctttctcttg tttgcgtacg gctcctcttg tttgcgtacg
    11221 gctcgctcaa aacgattttt aaaatgccgc cgttaggaaa accggacggt atcttttacg
    11281 caaaaatgac accccttatt gctcaattat tcgcgagccc cgagcactcc ttttgtacgg
    11341 ttttccaata attaccatta tggttaatgc cgcgccgcat aagcaattac aacgcctttg
    11401 aacacgggca cggccgtcga tcgccacaat taaggcaact tcgccaaaaa tgcgcccgga
    11461 ttttcttacc acaataaaat gtcgaatagg tttgcgtcga taatcggctg agggagctcg
    11521 tgatgcgtcg cagttcggtc atcaccacaa tcgcactcgt catcgctgtc tttgcgaccg
    11581 acgccgaggc gaagctggac ctatatgtcg ataaatcgac ccaacagata tctattattc
    11641 aaaatggtta tttactctat gtttggccag tttcgaccgg gcgcgacaag ttttcaaccc
    11701 ccagcggcgt ttacacgccg gaacgcctgg agcggagctg gttctctaaa gcatattaca
    11761 acgccgcgat gccgcatgcg atcttcttcc ataacggcta tgcgattcac ggcagctacg
    11821 atatcgcgca attggggggg ccggcttcgc atggttgcgt tcggctccac ccgcaagacg
    11881 ctgcgctttt gtttgcgatg gtccagcagg aaggccctgg caataccacg attgtggtcg
    11941 gcggcgatcg tacaccgggt ccgtcggcac agcgctatcg tggtccagac gaccagttcg
    12001 gatcggcgta tcgcggtgac ggcgggattg cgcgcggtga ttacgcgccc ggcccaagga
    12061 tggcgcctta ttacaacgcg gatcgtatgg cggatcgttc ggcaccgcgc tatcgtggtc
    12121 tagacgacca gttcggatcg gcatatcgcg gcgacggcgg gattgcgcgc ggtgcctatg
    12181 cgtctaaccc aaagatggcg ccttattacg acgcggatcg tatggcggat cgtatggcgc
    12241 cttactacaa cgcggatcgt tacgtcgaag caccagggcg gcggcgaatc gataacaacc
    12301 aattcgccat gaggagcatt taccccgggg ttcggccacc cgcaccgcgt cgtgacgcgg
    12361 aagtgccgcc ccgccccgca accgggccgc gcgggagcaa ccggccgccg ctggcgacga
    12421 ccaaactcag cccgaagccc gatcacgaac cggatgagac cgcaaaccat cacgcaaacg
    12481 cgagcgaccc agtcaaatcg ccaccaccag catcaccgcc gccatccgaa ccggagcagg
    12541 cgagcaccgg gtacaagatc tttccgaagt cgtactgggc cggagcatct tggcgatggc
    12601 gaccgaaatc cgatgaggag cctcgctagc gagaacgtgc ttcgatttca ctagaaacgg
    12661 tgtttcgaca acgttgaacg gcagccgcgg gcttgacccg cgtgcctatt tgtttagcaa
    12721 aaatgtcagg ttgtacggcg ttgcgattgt tttgtcgtcc aaatgcaagc ccgcattgct
    12781 gcgcgattta agtagtgcaa caataaatgc aaacattcgg ggttggcagt tccgaatgtt
    12841 gcgatattcc ttgcaggcta atatgttgtt tgagtttata aattcgaata ttctaataga
    12901 ataattacga acaaggcgcg atttcaaaaa ttcgcccgca attcggctca aatttggcca
    12961 tctgaaataa caagaaacat tttttgaaga cacgggcggc gtgccggccc agcggggaag
    13021 aggccaatga tcaagcaaac gaaacactgg ggtgccgagc tgcgaagtgg agcgatttcg
    13081 gaggatccgt tgatattgtc gggacagatc aagaacgcag tggacgaagc tctgctcgag
    13141 aacgtggtga acgaagcctg gaggctgatg gagctggaac gcaatgcggc aacgcccaag
    13201 agcgcgcgca atatcgaagc ccgagccatg gaggcctata ttgaacggcg gagaagattg
    13261 tcagcccaga tcagaacaga aaatccgttt tgcagcgaag aagaaatcga agcacgcttg
    13321 gaacagtttg gagcttagag ccccggcggc ctgctgatcg atccataccg caaccgcacg
    13381 gcatcggctg ctgcacggag tgaggataaa atagcaagtg gccgcgatgc ctgaatatca
    13441 actctactgc tttgcgcagt ccggcaacgc ttatcgggtc gcactgatgc tcaacctgat
    13501 cggcgccgat tggacgccga tctttgttga cttcttcgcc ggcggcgagt cgcgcacgcc
    13561 gaaattccgc accgaggtca acgaaatggg cgaggtgccg gttctggtgc acggcgccag
    13621 gaaactcagc caatctggtg tctgcctcac ctacttggcc gaccgcagcg gtgatttcca
    13681 gcctcgcgga gaagacgagc gcctggaatg cctgcgctgg atcatttttg ataaccagaa
    13741 ggtcaacggc tttctggggc cgtaccggtt cctgcgtaac ttcgcacccg cgcgcgatcc
    13801 gggcaccgaa gcgttcctca ggggccgtct cgctaacaat ctcagcatcg tcgacaagcg
    13861 gctgactaac gccccttatc tcctaggcgc ccgccccacc atcgcggata tatcgctcgc
    13921 cggctacatg tattatccgc cggaggaatt cgacttcgat atcggcaagg attttcccgc
    13981 gatcggtgcc tggaaagaac gcgttagagc gctgccgggg tggcggcatc cttatgagct
    14041 gatgccgggc tatccgctgg tgaagtagaa cgctgttgct cggattgcgc cgggccgctg
    14101 gctatttgtt gcgaccgctt tcctgcccct ggtcatggcc gcactgctca tgttcatgat
    14161 gatgaccgtg gccgtggccg tgatcgtggc cgtgatcgtg cccatgttca tgcgtgtgcc
    14221 cgtgtgggcc cggctcgaac ggcgccgaca tctcgacgct ctcaagcccg tgctccgcca
    14281 ccagcagttc gatctccggt aacctctgta acctgatccg attggccagg atttgcaccg
    14341 gcacatggcg attgccaagc gtcaagacga ggcgcgccat cgcggcgaaa tccttggcgc
    14401 gcacctcgag caccggttcg acatcggcca cgacctcgac gagttggccg tcgtcaagca
    14461 ccagaaggtc gtcggtgcgt aggcacggcg gcgctggaaa atcgaactcg atgcatgcgc
    14521 ccttgctgcc gaacacaaag ccctgctgct tgcaacgatc atcgaatttc aacagcagcg
    14581 tttcgacgat cttggcccca gccggtgatc cactggacgc cccggcccgc gctcccccgg
    14641 tgaacacctt ttgcgtgcgc ggcatgttcg gcgccggcgc tcagcggcgc gacgggcgct
    14701 caccgccccg ctcgaacgac aggacagcgg cattttcgga cgaaggcgtc ggcggattgg
    14761 gttccgaagc ttcgggcgcc gagggagcgg cgacattttc ggtaacctgg tcctgcggag
    14821 acgcgctctt accctgcgca tttgcctcgg cgtcgcggcg gacgtagtca cgatgggaca
    14881 gccagccgaa cggcaggctc gccagatagg tcagggcgcc aatcgtgagt accgcccacg
    14941 gataggcaat caacagtgca aagaacagca cgacgctgat gaagacgaga agcactagat
    15001 cgggcggcac gcgcctccca acccgcttgc ccgaataaac cggcaggcgc gacaccataa
    15061 ggaatccgat gaggagggta tagacgagcg tgaccggagc aatgaaggcc ggtagcggca
    15121 ctccgagaaa atgcgcatag acaggcagca acaccgtaat ggcgcccgct ggcgccggca
    15181 tgccgacaaa aaaattaccc gcccaggccg gacgattggg atcgtctatc atcacgttga
    15241 aacgtgcgag ccgcagtccg gccgcgatcg cgaagaccat ggcggcgatc cagcccgccg
    15301 atttgacctc gtgcaagctc cagaaataga gggtcactcc aggcgcgacg ccgaaattca
    15361 cgaagtccgc aaggctgtcg agctcggcac cgaagcgcga ggtgcccttg agaagccgcg
    15421 ccacgcgccc atcgatgccg tcgagcacag cggcaaacac gatcgcatat acggcccatt
    15481 cgaacgtgcc ctcggcggca aggcggattg ccgtcaggcc cgcgcacaac gccagcagcg
    15541 tgatgacgtt cggcaccagg gtgcgcaccg gaacggcgcg gaagcggcgg ccccgcattg
    15601 gcggcagtcc gggctcaaag ggcgaaggta acgaatatcg catgttcgta atatagtaag
    15661 ttgcgcgccg attgcccagc cgcacgtcgc ttctcgccgc agctgagggc cattcgctgt
    15721 cccctcccca gcttgcaggc agggccagaa gtgctcggtt caaggggcta ccgttcggtt
    15781 ggacagtttg tcgcgcccgg ttgtacgaat cgaagcgatt gtttctcggc taagtccggc
    15841 gacaatcgcc ccacgcgaag gagacaacaa tgtccgaaac catgacggcg aaacggcaca
    15901 aacgcggtgg cctctatttc gaagatttcg tcgacggcca gcttttcgag catcgctact
    15961 accggaccgt gacccagatg gacaacatgt tgttttccaa catgacgctg aatccgcagc
    16021 cgttgcatat cgaccggcat ttttgtgagc aggaaaccga atggggccag ccgctgatga
    16081 actcgctgtt caccctgggc ctgatgatcg gtatgtcggt gtccgacatg accaccggca
    16141 ccaccatcgc caatctcggc atgagcgaag tgcgctttcc gcatccggta ttcgagggcg
    16201 acacactgca cgccaccacc gaagtggccg ggaagcgtac ctcaaaatct cgcgcgggtg
    16261 ccggcatcgt cgagctgatc caccgttgct ataaccagga cgacaagctg gtcgccgaat
    16321 gtcggcgcag cgccttcatt ctgatgcggc ccgcctgatg cggtcgctgc tgttcgttcc
    16381 ggccgactcg cccggcaagc tcggcaaggc gctgggttgc ggtgccgacg cgatcatcct
    16441 cgacctggag gattccatcg ctcccgaacg caaggaggct gcgcgtgcgg gcgcggcgga
    16501 atttcttgct cagtcactat ctatgccaac gcggccacac ctcatcgtgc gcgtcaacgg
    16561 cctcactaca gggctgatcg acatcgatct cgatgccgtc gttccggcac gcccggacgc
    16621 catcatgctg ccgaaagcgg agggcggcgc ttccgtcgtt catgtggacg ccaagcttac
    16681 cgtgcgtgag gcgctgcacg gcttcgccga gggcatcatc cggattttgc cgattgccac
    16741 cgaaacggcg ccggcgctgt ttgtggccgg cacctatcgg ggcgccagtc cgcggcttgc
    16801 tgccctcact tggggcgccg aggacctgtc ggccgaactt ggcgcagaag ctaaccgcga
    16861 catgcaaggc caatttctcg atccctatcg gctcgcccgc accctctgca tcgcagccgc
    16921 cgcggccgcc gacgtgccgg cgctcgatac cgtctatgtg gattttcgca acgaggccgg
    16981 cctgcgccgg gaatgcgagg acgcccgccg cgacggcttc cagggcaaga tggccatcca
    17041 tccggtccag gtcgcgacc
//
LOCUS       DATILV010000034         1822 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2564988, whole genome shotgun sequence.
ACCESSION   DATILV010000034 DATILV010000000
VERSION     DATILV010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1822
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2564988"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            77..835
                     /locus_tag="VLJ17_00765"
     CDS             77..835
                     /locus_tag="VLJ17_00765"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HSV21539.1"
                     /translation="MRSTLKQPPRRPCLVRGLSNAAAVLAIAAAIAVAPKAHAQGGTE
                     AVYAVTYLDVATNAVPQGVELIKKYRDLSHRDAANLEFTVLQETSRPNRFVIMEGWKD
                     QGAFEAHDKGAAKAEFQDALKPIRISPPDRHMLQPFANTPARPASAGGALYMVEHVDF
                     LGGDPAIAAAAAPLVRALAESSQKEAGAVRYEIYRQPPPRINHYEVVAAWTDAKAFEA
                     HETAAYTLQFRAATAKSGSAWRANLYDQRLYKAL"
     gene            1324..>1822
                     /locus_tag="VLJ17_00770"
     CDS             1324..>1822
                     /locus_tag="VLJ17_00770"
                     /inference="COORDINATES: protein motif:HMM:NF024140.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MCP four helix bundle domain-containing protein"
                     /protein_id="HSV21540.1"
                     /translation="MVFIRNLTLKSKLHVVITVLGLLSGITTAISFFLLKASDEAQVA
                     LDRASQGTIHLEHINGLVYAAVMESRGIYMSADAKQAEPFARNMTKQLAELQQRAGAW
                     KLTAIESERARIDTLSANIDEFVRFRTELIRLAREVSTAAARTFGDNDANRTVRSGLN
                     KQLEEL"
BASE COUNT          390 a          561 c          539 g          332 t
ORIGIN      
        1 gttgctcggc tcgccgttcg atgatcgcct ctatgtgccg atcaactgaa cgctgaccca
       61 tccggaggaa aagcccatgc gttccacttt gaagcagccg ccgcggcgtc catgcctcgt
      121 gcgcggtcta tccaatgcag ccgcagttct cgcgatcgcc gccgccattg cggttgcgcc
      181 taaggcgcat gcccaaggcg gcaccgaggc tgtctatgcg gtgacgtatc tcgacgtcgc
      241 gaccaatgcg gtgccccaag gcgtcgagct catcaagaaa tatcgcgatc tgagccaccg
      301 cgacgccgcg aatttagagt ttaccgttct acaggagacg agccggccca accgtttcgt
      361 catcatggaa ggctggaaag accagggcgc cttcgaggcc catgataagg gcgccgccaa
      421 agccgaattc caagatgcgc tcaagccgat ccgcatcagc ccgccggatc gccacatgct
      481 gcaacccttt gccaatacgc cggcgcggcc cgcgtctgcc ggcggcgcgc tctacatggt
      541 ggagcacgtg gattttctgg gcggcgaccc cgccatcgcg gcggctgccg ctccgctagt
      601 cagggcgctc gccgagtcca gtcagaagga ggcaggcgcg gtacgctacg agatctatcg
      661 gcagccgccg ccgcgcatca accattatga ggtcgtagcc gcatggacgg acgcgaaagc
      721 cttcgaggcc catgagaccg ccgcctatac gttgcaattc cgtgccgcca cggcgaagag
      781 cgggagtgcg tggcgggcaa atctttacga tcaacggcta tacaaggcgc tgtgaccgcg
      841 taaacgccaa atagcgccaa cagggcgagg taggccaaat caccaagccg gcaagccgaa
      901 ggcgcgaccg gctgtatcat cattgcgacg gcgacaccgt gcgcagccag gccgcgcctg
      961 caggtcgata tcgctcgagg cccacgaacc ccactggtgg cttcagcgcg agtccgtggc
     1021 gcccgatcgc ttgcgtgatc gcgcgcttga tcagctggtg cgatgtcctc ggtcggaatt
     1081 atcagcacac gatgccctgc gtgggatcac attcttgcgc ggcccaatcg ttggtaagat
     1141 catccgggcg aacggaacca ttcgggtacc acgaaaggag gtggcgaaag accacttaac
     1201 gagaaagaca agttgttaat aaatctcagg caggttgtgg cgaatctatg ccgctccggg
     1261 agctttcaac caatgcgatc tctgaccgga ttggatttgc cctcgatcct gccctgaaag
     1321 cacatggtat tcattcgcaa tctgaccctc aaatccaagc tccatgtcgt cattacggtg
     1381 ctcggattgc tgtcgggtat cacgacggcg atatcgttct ttctattgaa ggctagtgac
     1441 gaggcgcagg tcgcgctcga cagggcgagc cagggcacta ttcatctcga acatatcaac
     1501 ggcctcgttt acgcggcggt gatggagtcg cgcggcattt acatgtcggc cgatgccaag
     1561 caggctgagc cgttcgcccg aaatatgacc aagcaactcg ccgaattgca gcaacgcgcc
     1621 ggcgcctgga agttgaccgc gatcgaatcg gagcgcgcca ggattgatac gttatcggcg
     1681 aacatcgatg aattcgtccg gttcaggacc gaacttatac gcctcgccag agaagtcagc
     1741 acggccgcgg cacgaacatt cggcgataat gatgccaacc gaacggtgcg ctccggcctc
     1801 aacaagcagc tcgaagaact gg
//
LOCUS       DATILV010000035         2159 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_776608, whole genome shotgun sequence.
ACCESSION   DATILV010000035 DATILV010000000
VERSION     DATILV010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2159
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_776608"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..309
                     /locus_tag="VLJ17_00775"
     CDS             <1..309
                     /locus_tag="VLJ17_00775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013525273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HSV21541.1"
                     /translation="AGVTDPVVHGPILNHASMLIEAAVDGQGIALARTTLAARDIING
                     RLVRPIDVSLRMSNTYWIVCPKVTSSMPKIATFRNWLLAEAAEDARRLKAITFVGAAK
                     "
     gene            complement(478..1440)
                     /locus_tag="VLJ17_00780"
     CDS             complement(478..1440)
                     /locus_tag="VLJ17_00780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21542.1"
                     /translation="MAFDVQPINGSLARVAARLCNFPTGHAGLLPAHIEWLDSTLAPV
                     VRDLATPWVDIIGYASHLGDATFNQKLSFARCEAVRRRVETYSLKVLFPIEWGKGETE
                     STGGANDNSGYWRAVEVYAFGFKPAPKPTPPQVNYDRKVRLHFRSTAMPVVPEFTALA
                     NAQQVYDPCRVLLEFASGVSMGATGDDLLMLDASDGTCRWNDASDQQKLLEKLGGRQG
                     VGPNDVVVYYANQIQEKNGNHLNGCAGHRPNMAAVVVAAGGSPWTLAHELGHVLLGPN
                     FTPVHSTDSINIMFAPTTGITAPIPAFTPDQINQLRASPFCVPI"
     gene            1687..>2159
                     /locus_tag="VLJ17_00785"
     CDS             1687..>2159
                     /locus_tag="VLJ17_00785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016918401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HSV21543.1"
                     /translation="MADLAAARNLLHAVFGFASFRAGQAEIIDTILSGRDVLAVMPTG
                     SGKSLCYQLPALMRDGLTVVVSPLIALMRNQVAQLRSYGVAAASLNSTNDFDENRTIL
                     EQIARGELRLAYVAPERLAKPETIALLKRARVGMLAVDEAHCISQWGHDFRPEYM"
BASE COUNT          452 a          637 c          620 g          450 t
ORIGIN      
        1 gccggcgtca ccgatcccgt tgttcatggt ccgattctca accatgcgag catgttgata
       61 gaagctgccg tcgacggtca gggcattgcg ctggctcgca caacgctcgc ggcgcgggat
      121 atcataaatg gtcgtctcgt aaggccaatc gatgtttcct tgaggatgtc caacacgtac
      181 tggatcgtgt gcccgaaggt gacttcgagc atgcccaaga tcgcaacgtt ccggaattgg
      241 ctattggccg aggcggccga agacgcgcgc cgcttaaaag ctattacgtt cgtcggtgcc
      301 gccaaataag accaagacga cccctgctaa caacagacca ggcagtcccg ccccggcaat
      361 aggacccaag gagtccgcaa cgctgacgct gttgagccca atgtcattga gttgatccac
      421 gccggagaaa tcgacagtag cgcaagtgta cgttgcggtg aaaaggagcg tctccggcta
      481 aatcggcacg cagaacggac tggcgcggag ctggttgatc tgatcgggtg tgaaggccgg
      541 aataggtgcc gtgatgccgg tcgtcggcgc aaacataatg ttgatgctat cggtactgtg
      601 caccggtgtg aagttcgggc cgagcaggac atgaccgagt tcatgcgcca gcgtccatgg
      661 cgacccgccg gctgctacaa cgacagccgc catattcggt cgatgacccg cgcagccgtt
      721 caagtggttg ccgttctttt cctggatttg attggcgtaa taaacgacga cgtcgtttgg
      781 gccaacgccc tgccgaccac cgagtttttc caggagcttc tgctggtccg acgcatcatt
      841 ccaacggcag gtaccgtcgg acgcatcgag catcagcaga tcatctcccg ttgctcccat
      901 gctgacccct gaagcaaatt ccagcaaaac gcggcacggg tcgtaaactt gttgggcatt
      961 tgcgagcgcc gtaaattccg gaacgaccgg catcgccgtc gaacggaagt gcaagcgaac
     1021 tttgcgatca tagttcacct ggggcggggt cggctttgga gccggtttga aaccgaatgc
     1081 gtaaacctcg acggcgcgcc aatagcccga gttgtcattg gctccgcctg tgctttcagt
     1141 ctcgcctttt ccccactcaa tgggaaacag gaccttgaga ctgtaagtct ctacgcgccg
     1201 ccggacggct tcgcagcgtg caaaagacag cttttgattg aatgtcgcat caccaagatg
     1261 gctggcgtag ccgatgatat caacccatgg cgttgccaaa tcgcgcacga ctggcgcaag
     1321 cgtcgagtcg agccactcga tatgtgccgg gagtaggcca gcatgtccgg tcggaaaatt
     1381 gcacaaccgt gctgccacgc gagccaatga gccgttgatc ggctggacgt cgaacgccat
     1441 ttttcctccg attgtctgaa ttctcggcgc gaaacgaccg aattcatcat ctccgtgata
     1501 ccgcgtgcct ttgccggctc aagtttggtc gtttccagaa cccgtttggt tcacaaccga
     1561 tcggactttc ttccattgaa cttgtccttc gtggtcgagc gaaattgcgc aagccaaaca
     1621 ccgtggcaaa catttcgatg ccgcgttaga aagtggtggc cccgtattga gggaacgaaa
     1681 cttccaatgg ccgatcttgc cgccgcccga aacttgctgc acgccgtgtt cggctttgcg
     1741 tcgttccgcg ccggccaagc cgagatcatc gacacgatcc tctccggccg cgacgtgctt
     1801 gccgtcatgc cgaccggcag cgggaagtcg ctgtgctatc aattgccggc gctaatgcgc
     1861 gatgggctga ccgtcgtggt gtcgccgctg attgcactga tgcgcaacca ggttgcgcaa
     1921 ctgcggagct atggggtcgc ggccgcgagc ctcaattcca ccaatgattt cgacgaaaat
     1981 cgcactatcc tggagcagat cgcgcgcggc gaattgcgcc tcgcctacgt ggcgcccgag
     2041 cggctcgcca aaccggaaac cattgcgctt ctcaaacgcg ccagggtcgg catgctggcg
     2101 gtcgacgaag cccattgcat ctcccaatgg ggccacgatt ttcgccccga atacatgaa
//
LOCUS       DATILV010000036         2778 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4353827, whole genome shotgun sequence.
ACCESSION   DATILV010000036 DATILV010000000
VERSION     DATILV010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2778)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2778)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2778
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4353827"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2239)
                     /locus_tag="VLJ17_00790"
     CDS             complement(<1..2239)
                     /locus_tag="VLJ17_00790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional YncE family protein/alkaline
                     phosphatase family protein"
                     /protein_id="HSV21544.1"
                     /translation="MLSQDSAKKLTTPLPTSKGLAPAAGRTSSLNSFPATIAVSPDGR
                     YAAMVHAGFGTQKSLGRQSISIANLGSGEVKDFPDDRLADEAHQSFFVGLAFSGDGKH
                     LYASLGSISDPTGAKPGNTGNAIAVYSFRDGQVSPERLIKLGPTQLAAGKYVSVGLFK
                     TPKGTAIPYPAGLAVIPSDKGEKLLVANNLSDSAIVVDASTGHLDRQFDLSANRLVPS
                     AYPYTVVVSRDGRRAWCSLWNASQVAELDLISGEVVRRISLRKPESEIAPGSHPTAML
                     LSRDEKTLFVTLSNADLVAAISTADGTPTRWFSTRLPRQAYGGTSPVALAISGDGKQL
                     LVATAMLNAIAVFDLKEDQEGAHKDAPQAAAGFLPTEWYPTALAVHGDDVWFTTAKGR
                     GTGPNNGPNVIPEGKHHHPHPYIVTLLYGSLGRVNYAEASKKLGELTQQVEEANRLHA
                     EAGKFQFPGGSNPIKHVIYIIRENRTYDQILGDMKEANGDPSLTMYGRDITPNAHKLA
                     LQFGIFDNFYDSGEVSGNGHVWSTAAITSDYNEATWQIAYRSRERTYDFGGSVAEEYP
                     AERGVPNVDSPQTGYLWVNAASHGITYRDYGEFIESDFCPLKNAEATPQEGNPQPQGT
                     QCEHDAIRQGEPLPASLGTPKGGASPYPWPIPLSKRIIATMPELQGHTDMKYPPFNPD
                     YPDQLRADEFLNEFQGFVQARNEGKGEQLPNLVIMHLPNDHTGGTRPGKPTPSASVAD
                     NDLALG"
     gene            complement(2382..>2778)
                     /locus_tag="VLJ17_00795"
     CDS             complement(2382..>2778)
                     /locus_tag="VLJ17_00795"
                     /inference="COORDINATES: protein motif:HMM:NF014010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PhoU domain-containing protein"
                     /protein_id="HSV21545.1"
                     /translation="DMVSLPAVDLPVDISRMAAAVSAMVRRALESFIEAKAELAQAVL
                     EMDNVVDRMRDEAFIVLVKTMNEKPETTRQALDALLVARNLERVADHATNIAEDVIFW
                     VRGADVRHNVPQEASGQEEPAQRAATETH"
BASE COUNT          522 a          855 c          781 g          620 t
ORIGIN      
        1 tgccgagcgc cagatcgttg tcagcgaccg acgctgaagg cgtgggcttg cccggccgcg
       61 tcccgccggt gtgatcgttc ggcagatgca taatcaccag attcggcaat tgctcgccct
      121 tcccctcgtt gcgtgcttgc acaaatccct gaaactcatt caaaaactca tcggcccgca
      181 actggtcggg ataatccgga ttgaacggcg gatacttcat atcagtatgc ccttgcaact
      241 cgggcatggt tgcgatgatt cgcttgctca gcggaatcgg ccaggggtac ggacttgcac
      301 cgcctttcgg agttccgaga cttgccggca acggttctcc ttgccggatc gcatcatgtt
      361 cgcactgcgt gccctgcggt tgcggattcc cttcctgcgg tgtcgcttca gcattcttga
      421 gcggacagaa atcgctctcg atgaactcgc cgtaatcgcg atacgtgatc ccatgactgg
      481 cggcgttcac ccacaagtag ccggtttgtg gagaatccac gttcggaacg ccgcgttccg
      541 cgggatattc ctctgccacc gatcctccaa agtcgtaggt gcgctcacgg cttcggtagg
      601 caatctgcca ggtggcctcg ttgtagtcgg acgtgatggc ggccgtggac cacacatgac
      661 cgttgcctga gacttctccg ctatcgtaga agttgtcaaa gattccgaac tgcaacgcca
      721 gtttgtgtgc gttgggcgtg atgtcgcggc catacatcgt gagcgaggga tcgccgttcg
      781 cttccttcat atcgcccaaa atctgatcgt aggtgcgatt ctccctgatg atgtaaatca
      841 catgcttgat cggattgctt ccgcccggga actggaattt cccagcttct gcatgcaggc
      901 ggttggcttc ctccacctgc tgcgtcaact cgccaagctt cttgctggcc tccgcatagt
      961 tcacgcgccc gagagaaccg tacaaaagtg tcacgatgta aggatgagga tggtggtgct
     1021 tgccttccgg aatcacgttc ggcccgttat tcggcccggt tccccggcct ttggcggtcg
     1081 tgaaccacac gtcgtcgcca tgcacagcca gtgcggtcgg ataccactcg gtcggcagga
     1141 acccagccgc ggcctgcggc gcgtccttgt gcgctccttc ttgatcctcc ttgagatcga
     1201 agaccgcgat tgcgttcagc atcgcagtgg ctaccagcaa ttgctttcca tcaccagaaa
     1261 ttgccagtgc caccggcgac gtgccgccgt aggcttgccg cggcagcctg gtcgagaacc
     1321 agcgcgtcgg cgttccgtca gcggtcgata tcgcggccac caggtcggca ttcgatagcg
     1381 tcacgaacag cgtcttctcg tcgcggctca ggagcatcgc tgttggatgg gatcccggtg
     1441 cgatctccga ctcaggttta cgcagcgaaa ttcttcgcac aacctcgcca cttatcagat
     1501 ccagttcggc tacttgcgaa gcgttccaca gactgcacca tgcgcgtctt ccatcgcggg
     1561 aaacaactac cgtgtaggga tacgccgagg gcactaggcg gttggcgctg aggtcaaact
     1621 gccgatccag atgtccggtg gatgcgtcca ccacaattgc actatcagaa aggttgttag
     1681 ctaccagcag tttctcgccc ttatcagacg ggatgaccgc cagacctgct ggatatggga
     1741 tcgcagtccc tttgggcgtc ttgaataaac cgactgagac gtacttccct gccgcaagct
     1801 gtgtggggcc gagttttatc aaccgctccg gggagacttg cccatcgcga aaactgtaaa
     1861 ccgcaatcgc gttccccgtg ttccccggct tggcaccggt gggatccgag atcgagccga
     1921 gcgacgcgta taaatgcttg ccgtccccgc tgaaagccag accaacaaag aagctctggt
     1981 gcgcttcatc ggccaaccgg tcgtcgggaa aatccttcac ctcaccgctg cccagattgg
     2041 cgattgagat ggactgacgt cccaagctct tctgtgtccc gaagcccgcg tggaccatgg
     2101 cggcatagcg gccgtcggga cttaccgcaa tggttgcagg gaaactgttc agagaagacg
     2161 tgcgacctgc cgccggggcg agccctttgc tggtgggcag cggagttgtc agttttttgg
     2221 ctgagtcttg cgatagcaat gagctcccgc tcaataaagc tatgacggaa atcgctcgta
     2281 tccgcacagg aacctccggg gggcccgatg ctatctaacc ccccaaaaaa cgaaagccgg
     2341 tcagtatctc tgaccggctt actggtttgc aatcgctctc gctagtgcgt ttcggtggcg
     2401 gcgcgttgtg cgggctcttc ctgtccgctc gcttcctgag gcacgttatg ccggacatct
     2461 gcaccccgca cccagaaaat cacgtcttct gcaatgttag tggcgtggtc ggcgacccgt
     2521 tccaggttgc gcgccaccag taacgcatcc agtgcctgcc gggtggtttc gggcttttcg
     2581 ttcatcgttt tcacgaggac gataaaagcc tcgtcccgca tgcgatcgac gacgttatcc
     2641 atttccagga ccgcctgcgc cagttccgct ttcgcttcga taaacgactc gagcgcccga
     2701 cgaaccatcg cgctcacggc cgcagccata cggctgatgt ccaccggcaa gtccaccgcc
     2761 ggcaggctga ccatgtcc
//
LOCUS       DATILV010000037         4481 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1798753, whole genome shotgun sequence.
ACCESSION   DATILV010000037 DATILV010000000
VERSION     DATILV010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4481)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4481)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4481
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1798753"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            272..559
                     /locus_tag="VLJ17_00800"
     CDS             272..559
                     /locus_tag="VLJ17_00800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21546.1"
                     /translation="MTFENETVAVGAISVVAVLIWSTIQIWKRMRAIDAQVTKMQKEI
                     DILQMHESRRLMMDLKANSKVEGQKINPDNSPVETGDVVRLIKTPPTTPAQ"
     gene            complement(695..1420)
                     /locus_tag="VLJ17_00805"
     CDS             complement(695..1420)
                     /locus_tag="VLJ17_00805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21547.1"
                     /translation="MARGCVHRALLAGSITCCAAVGVAVAQEGAEVTEDLGNLYALAR
                     RTTSAGSIIQTLLFAGQAIVTDIAVPGPDTGVIAGTTGVSPEPGGSAHVARVDAEELR
                     LGLGPGFGGTWLTGEILDNYLILHRTRASGPVMHEVFHEGHKVGVVTEVSSSVGAARS
                     PGRNSFVFESTDDRFVVHLTQSDGTRIHATTERGRFSGQVVERVAAAKPPSEPLRGLV
                     KPSTGRNRNGSRDHRSPLSRNRP"
     gene            complement(1660..2958)
                     /locus_tag="VLJ17_00810"
     CDS             complement(1660..2958)
                     /locus_tag="VLJ17_00810"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSV21548.1"
                     /translation="MHDIRGPGAVVRASLAAVANLAIWAFVPLPPADAGIFAQWVELG
                     PDGTSSVRAITDELCPEVLFDGVPMSMSVRAEPGQKIENVKPAAFRVRGCEVPVPRGA
                     VAATLDGRALPLARPNPQRILIFGDTGCRLDRNAAQDCNDPAAWPFPRIAVAAANARP
                     DLVIHVGDYHYRELPCPAERSGCARSPWGYGFDAWHADFFEPAAPLLSAAPWIMVRGN
                     HEDCARAGEGWIRFLDWLPISATCRDLTGIFVARLGDFGIVVVDGARAEDPKGDMGAL
                     VGLLRGQLAEVAGKVSAEAWLVSHRPLNAMRSALDRRANEVENTVQELAFGSVMPEGV
                     RMTVAGHIHFFQAVDFGGLRPPQLVVGTGGDNLSLAPPLSIVGADINGRKVVSSVTYS
                     GFAYMVWDRTNNLWIGTLFDADGKTLNHCQLLARSLSCGP"
     gene            complement(3098..3328)
                     /locus_tag="VLJ17_00815"
     CDS             complement(3098..3328)
                     /locus_tag="VLJ17_00815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21549.1"
                     /translation="MSETSSAKAVGMGIAGGAIATALIDLLIAKGVISHEEARGVFED
                     AMYRAAMYTGTFEGLEATKIIGDFLEPEIPAK"
     gene            complement(3369..4289)
                     /locus_tag="VLJ17_00820"
     CDS             complement(3369..4289)
                     /locus_tag="VLJ17_00820"
                     /inference="COORDINATES: protein motif:HMM:NF013539.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HSV21550.1"
                     /translation="MVTRPTVEEVRAKASDSANVIEELRRRYDLLTHSQKRIAEYIVD
                     HSQAVAFSTVDQMAVRLGVNPSTIVRFCYRLGLNGFPDLQERMRQVVRGQLSRADEQA
                     ETGASGAHLQGTTFGDSLAHDVRNLQRTIMGLALDDLNRAVDQVVAARRVYVIAGFSA
                     FSLAHYVGLVLSRLRPDVHTLAADEGVSKVRLAEITASDCLLAFTFPRYAQFTQRAAL
                     WAREQKAAIVVVTDTPISAVGQIADTVLVASPTGTGLQNSMVAPMAVANALLNGVMAA
                     KGTGALDRYNSSDGLFDNLNSFLLKLDQAD"
BASE COUNT          923 a         1387 c         1299 g          872 t
ORIGIN      
        1 cgcgcctgac tggggggagg tagcagggca cggggtaact acccggggtt gatcaccggg
       61 ggcggtaatc tgcctcacgt cgttcgggca gcttgttcgg ctaagctctg ccttgatcct
      121 cgaaaatgga gccccaagat cacccgttcc ctcccccggc cttctcttaa ggtcgtccgc
      181 tatcgggtga ttcaaaatcc attgcgaacc tgtggatttc gcggcttggt tgtttatatt
      241 tgggcgtctg tgacggcaaa ggaataacac gatgaccttc gaaaacgaga cggtggcggt
      301 cggcgcgata tcggtcgttg cggtcttgat ctggagcaca attcaaatct ggaagcggat
      361 gcgcgcaatc gatgcacaag tcacgaaaat gcaaaaggaa atcgatatat tgcaaatgca
      421 tgagtcgcgc cgcttgatga tggacctgaa ggcgaattcc aaggtggagg ggcaaaaaat
      481 caatcccgac aatagtccgg tcgaaaccgg tgacgttgtg cggctgatca agacgcctcc
      541 caccacgccc gcgcaatagc cctgacctct tgactttctt tggttaggat atgtttgtta
      601 ctgctgcggc gtgcctgaca gcggccgcga tggctaggcg acagactggt tcagcttcgc
      661 tgcccatccg cactggatcc ggagcttgac gttttcacgg tcggtttcgg ctcagcggcg
      721 agcgatggtc tcgcgaaccg ttgcggttcc gaccggtgga cggtttgacc aatccacgca
      781 atggttccga aggcggcttt gcggcagcga cgcgctcaac cacttgaccg gagaaccggc
      841 cacgctccgt ggtggcgtga atcctcgttc catctgactg cgtgagatgc acaacaaagc
      901 ggtcatcggt ggattcgaac acgaacgaat ttcgacccgg cgaccttgcg gcgccgaccg
      961 acgagctgac ttcggtgaca accccgacct tgtgaccttc atggaaaact tcgtgcatga
     1021 cggggccgct tgcgcgagtg cgatgcaaga ttaggtagtt gtcgagaatt tccccggtca
     1081 accaagtgcc gccgaatcca ggccccaaac cgagccgtaa ctcctcagcg tcaacccgcg
     1141 cgacgtgcgc actgccgccc ggctccggag aaactccagt agtgccggcg atgacgcccg
     1201 tatctggccc cggcacggcg atgtcagtga ctatggcctg accggcgaag agcagtgttt
     1261 ggatgattga acccgcactc gtagtgcggc gcgccaacgc gtacagattg ccgagatcct
     1321 cggtcacctc ggcgccctcc tgcgcgaccg caacgcccac cgcggcgcag caggtgatcg
     1381 atcccgctaa gagggcacga tggacgcaac cgcgggccat attatatact cccgatatag
     1441 tatataatat aacaccacta acccgtgttc ggttgattat catctccgca tcaatgctca
     1501 aggaccttac ggtcccgacc ttcggtcgac tgctgcatgc ccagtaacgc cacatccaac
     1561 ttcaggatgc atttttttgg cgtggccatc aatgcagcct gccgatcatt gttttgcggt
     1621 tcgcggtgcg cgcgcgcctt gagctcgcat gccagcacct catggcccgc agctgagcga
     1681 gcgagcaagc aactggcaat ggttaagcgt ctttccatct gcgtcgaata gcgttccaat
     1741 ccaaagattg ttggtgcgat cccacaccat gtaggcgaaa cccgaatagg tcactgaact
     1801 gacgaccttg cggccgttga tgtcggcgcc cacgatactg agcggtggcg cgagggaaag
     1861 attgtcgccg ccggtaccga ccaccagctg aggcgggcgc agacctccga agtcgaccgc
     1921 ctgaaagaaa tgtatgtggc ccgcgaccgt catccgcacc ccttctggca taacgcttcc
     1981 gaacgccagt tcctgcaccg tgttttcgac ctcgtttgcc cggcgatcca acgcgctgcg
     2041 catagcgttg agtgggcggt gggacacaag ccaagcctcg gccgacacct tccccgccac
     2101 ctccgcaagc tggccgcgca acaaaccaac gagcgcaccc atatcgccct tcgggtcttc
     2161 cgcgcgtgcc ccgtccacca ccacaattcc gaaatcgccg agtcgcgcca cgaagattcc
     2221 tgtcaaatcg cgacaggtcg cgctgatcgg gagccaatcg agaaacctga tccacccttc
     2281 gccagcccgc gcgcagtcct cgtggttacc gcgcaccatg atccaaggcg ccgcggataa
     2341 caaaggcgct gctggctcga agaagtcagc atgccatgcg tcgaatccgt aaccccacgg
     2401 actgcgcgcg cagccgctgc gctctgccgg gcacggcaat tcgcgatagt gatagtcgcc
     2461 cacatggatc accaaatccg gccgcgcatt agccgccgct acagcgattc tcggaaaggg
     2521 ccatgccgcc ggatcgttgc agtcctgggc cgcgtttcgg tctagccggc agccggtatc
     2581 gccaaatatc aagatgcgtt gagggttcgg ccgtgcgagt ggcagcgccc tgccgtcgag
     2641 cgttgccgcc accgcgcctc gcggcaccgg cacctcgcaa ccgcgtaccc ggaacgcggc
     2701 cggtttgacg ttctcgatct tctgccccgg ctcggcgcga acgctcatag acatcggcac
     2761 gccgtcaaag agcacctcgg ggcaaagctc gtcagtgatc gcccttacgc tcgaagtgcc
     2821 gtccggcccg agttcgaccc actgggcaaa aatgcctgcg tcggcaggcg gcagcggtac
     2881 aaaagcccag atcgcgaggt tagctacagc ggcgaggctc gcgcggacga cggctccggg
     2941 accacggata tcatgcattt cgaacgagcc ctttcggctg atacgatttc gtggcggagt
     3001 tgtaacaacg ctcgaacgtt gtcctgcaac gtagaacaag actcaccgcc atgggagctt
     3061 gcgctgttta gcttaaggca aggatggcgc caatccacta ttttgcggga atctcgggct
     3121 ccagaaagtc gccgatgatc ttggttgcct cgaggccctc aaacgtgccg gtgtacattg
     3181 cggcccggta catagcgtct tcaaacacgc cacgtgcttc ctcgtgactg atcacaccct
     3241 ttgcaatcaa cagatcgatc agggccgtgg cgattgcgcc tccggcaatt cccattccta
     3301 cggcctttgc gcttgaagtt tcgctcatga cagtcctcct ggattgagga acggaccatc
     3361 cgtcctagtc agtccgcttg atcgagttta agcaggaatg agtttaaatt gtcgaacaag
     3421 ccgtcgctgc tgttgtagcg gtcaagcgcc ccggtgcctt tggcggccat cactccgttg
     3481 aggagcgcat tggcaaccgc catcggagcc accatggaat tttgcagtcc ggttccagtt
     3541 ggcgacgcca ccaacaccgt atcggcgatc tggccgaccg ccgagatggg cgtatcggtg
     3601 accacaacga tcgcggcctt ctgctcccgc gcccaaagcg ccgcccgctg agtaaactgg
     3661 gcatagcgcg gaaatgtgaa cgccagaagg cagtccgacg cggtgatctc ggcaagccgg
     3721 accttggaaa cgccctcgtc ggccgcgagc gtatggacgt cgggacgaag gcggctgagc
     3781 accagcccga cataatgtgc aagggaaaac gcggaaaaac ccgcgatcac gtacacgcgg
     3841 cgcgccgcca cgacttggtc gaccgcgcga ttgagatcat ccaaggcaag acccatgatg
     3901 gtgcgctgaa ggttgcgcac atcatgggca agtgaatcgc cgaaggtggt gccctgcaag
     3961 tgagcgccgc tggcgccggt ctcggcctgc tcgtcggcgc gcgacaactg cccgcgaacg
     4021 acttggcgca tacgctcctg caaatcggga aatccgttga ggccgaggcg atagcagaaa
     4081 cgcacgatgg ttgatggatt gactccaagc cgcacagcca tttgatcgac agtcgaaaat
     4141 gccactgcct gggaatggtc gacgatatat tcggcgatgc gcttttgcga atgggtgagc
     4201 agatcgtagc ggcggcgcag ttcctcgatc acatttgcag aatcggaggc cttcgcacgt
     4261 acctcttcga ccgtcggtct ggtcaccatg ggccttcccc tcgcggcctt acgtacttca
     4321 tactattaca tcacggcagc cgtcgttggt gcacacagag gcgcgccgca cgatgaggtc
     4381 gcgttcggag cgatgtcgtc tcaacggtct ataaagggcc aatcgttccg ttgcggacgg
     4441 cggtatcgac cgcaacttca acgtttgcgt cgcacaactt c
//
LOCUS       DATILV010000038         5608 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_521195, whole genome shotgun sequence.
ACCESSION   DATILV010000038 DATILV010000000
VERSION     DATILV010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5608
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_521195"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            304..1995
                     /locus_tag="VLJ17_00825"
     CDS             304..1995
                     /locus_tag="VLJ17_00825"
                     /inference="COORDINATES: protein motif:HMM:NF015803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HSV21551.1"
                     /translation="MYGVGKAARVIVVACLWVAAGLCAFPSAFAQVIPPSDQPGRERF
                     RFTEPPPPRAEPVGPRVNLPGTVAPEGADKIQLKILGIKIEGASVYRPEELKVLYQDM
                     IGQEVALSAVYDLAQRMTTKYGTDGYVLSRAIVPPQNLTKGGAVIRIQVIEGYVDKVV
                     WPESLARFRDFFSYYEAKILADRPANVRTIERYLLLAGDLPGLKFSTSLKASEKNPNA
                     ATLLVEATYKPVDLFARIDNRGTPSRGPLQYVGSVTANNFLGAHDAFNFTYAGVVPTR
                     ELTYVAASYRQVLTAEGLAAFVNVSDGFGKPGTAQLELLNYKTKTLYGDTGISYPLIR
                     SREKNLTLIGLFFASNSLSDVLDTPFSDDRIRGARFKVDADAADDWRGVTQLNVTVSQ
                     GFNGLGSTPTGSQLASPLNGRADFTKVEGTASRTQALFGPMSMYLAGYGQYATTSLLS
                     PEQCSFGGRFFGRAYDPSQLLGDSCYMGNAELRFDLPTFWNVSLAQLYGFTDGAELFT
                     REPGFGFPSWQRAASAGAGVRLGWLNDLNADLTVAKAIDGPRDDTRFFFAVTGKY"
     gene            2008..>5608
                     /locus_tag="VLJ17_00830"
     CDS             2008..>5608
                     /locus_tag="VLJ17_00830"
                     /inference="COORDINATES: protein motif:HMM:NF017658.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GLUG motif-containing protein"
                     /protein_id="HSV21552.1"
                     /translation="MNRRLHRLLLTTTALMPLGTWLAVADPLGGQVVGGSATIQGQGT
                     SIVTVTQSSQNAIINWNTFNIGAGEKTNINMPNASSVGLERVTGNLGPSTINGSLWSN
                     GILFLVNPNGIMFGQGAQVNVSGLLATTHDIKDSDFMAGRYNFNISGNPAASIVNQGS
                     ITAAQGGFAALVAPGVRNTGTITATLGTVGLAAGNGFTLDMYGDKLITLAVGDSVAGQ
                     VTDVATGQPLTSLVGNSGKLSANGGKVEITAAAAKTVVDSVINNTGVIEANTIADKGG
                     TIVLGAATDKSKPAGAPAQNVKLAGTISASGKNAGQKGGTIKVAGENIALNGAKLDAS
                     GQAGGGTVLVGGKGTTATATTVTADAATTINASATRNGDGGTVVVWADQLTSFAGLIK
                     ATGGELGGNGGFVETSGAAVNFANITVDTSAKAGVSGTWLVDPTDLTVDDSAAATITK
                     NLATTNVTLQTNTDGAIGPGIRTNGPGDIIINAPISWASNSTLSINAINAITVNAPIT
                     VNASTSGNSSGNLLLTSTFNSITVNAPITVNATNAAASNLALNAALGAVTVNATITIG
                     GHNGISMSVAGNPNAPRARQLSFGNGGSVQFTGTPRTGQSLFINNQGYTLLYSMDDVR
                     SINASAANLGGTYALAKPLDAKGVTDWTPIGSSTRPFTGAFQGLGNTISNLNINLPTT
                     TGVGLFGSIGQGGLIQNFGLVGGSVNGQITVGELAGFNNGGTVIQSYATGTVSGSDMV
                     GGLIGLNSGAVIQSSATGPVSGATTVGGLIGWNTNVVSQSYATGTVNGASGTEGGLVA
                     LNSGNITQSHATGAVAAGGSAEVGGLVGFNTGGAISGSYASGTVTVGEFSNAGGLVGL
                     TQGGSMSASYATGAVSSNAANVSLGGLVGLNFSGAITGSQAYGAVSSTANLLPNNANC
                     SSGGCQFVNVGGLVGQNYGTISGPSWATTPTACNAGFTCSNGTVTVGSGAVGGGLAGS
                     NDGIITNAFAIASVVGAAGTGTVSNGNQTTLGGLVGKNTGQITNSFAASTIGSPATSA
                     LEVGGLVGSNNGIISGSFASSAVSAGDNSVVGGLVGSNQPNNNPSCNGCPVGVGHNNT
                     ATITNSNAFGDVTGGASSIAGGLAGFAGGTDGSLGGGSVSNTTAHGAVIAGNNSFVGG
                     LIGVAATTISSSSAHNPSVASSGSNSIVGGLVGFNAGSVTTSSSTTPVSGTGNS"
BASE COUNT         1119 a         1717 c         1728 g         1044 t
ORIGIN      
        1 aaccacaggg gagtgtgaaa caacccggtc cgaaaacggg gcgcgaagga agtttgtcct
       61 ttcccttcag ctaaggaagg actgaaatcc aaagaaacat tgccacaatt caaggtcgta
      121 tttcggcact ttccaacggc aatttgtggc gcaattcgat tgcaggtgaa gcattatggc
      181 cacagctgcg gcgaattcag ccttgttgtc cacgatttcg aacctatttg gttaaatttg
      241 tgtttcgcct cttggcgttc cccattaccg ttgcgctcat ctcgttgggc ggaaatgtga
      301 atcgtgtacg gggttgggaa agctgcgaga gtcattgtgg tcgcgtgcct gtgggtcgca
      361 gccggacttt gcgcttttcc gtcagccttc gctcaagtga tcccgcccag cgatcagccg
      421 ggccgcgagc gctttcgctt caccgagccg ccgccaccgc gggccgagcc ggtcgggcca
      481 cgagtgaacc tgccgggcac ggtcgctccc gaaggggcag acaaaattca gctcaagata
      541 ctcggcatca agatcgaggg cgcgagcgtc taccgacctg aagagctaaa agttctttat
      601 caggatatga tcgggcagga ggtcgcgctg tcggcggtct acgatctcgc ccagcggatg
      661 acgaccaaat acggcaccga cggctatgtg ctgtcccgcg ccatcgtacc gccacagaac
      721 ctgaccaaag gcggcgccgt tatccgcatt caggtgatcg aaggctatgt ggacaaggtg
      781 gtgtggccgg agtcgctggc gcggttccgc gattttttct cctattacga agcaaaaatc
      841 ctcgccgatc ggccggcgaa tgtgcgcacc atcgagcgct atctgctgct cgccggcgat
      901 ttgccgggcc tgaaattctc gaccagtctc aaggcctcgg aaaagaaccc taatgcggca
      961 acgctgctgg tcgaggccac atacaagccg gtcgacctct tcgcgcgcat cgacaatcgc
     1021 ggtacgccgt cgcgaggccc cttgcagtat gtggggtccg tgacggccaa caacttcctg
     1081 ggagcccatg acgccttcaa tttcacctac gcaggcgtgg tgccgacccg tgagctcacc
     1141 tacgtggcgg ccagttatcg gcaggtactc accgcggaag gccttgcggc cttcgtcaat
     1201 gtgagcgacg gcttcggtaa acccggcacc gcgcaactgg aactcctcaa ctacaagacc
     1261 aaaacgctct atggcgatac cgggatcagc tatccgctca ttcgcagccg cgagaaaaac
     1321 ctgacactga tcggcctgtt cttcgccagc aacagcttga gcgacgtgct cgatacgccg
     1381 tttagcgacg atcgcatccg cggcgctcgc tttaaggtcg atgccgacgc ggcggacgac
     1441 tggcgcggcg tcacccagct caatgtcacg gtgagtcaag gtttcaacgg gctcggcagc
     1501 accccgaccg gcagtcagtt ggcctcgcct ctcaacgggc gggctgattt taccaaggtc
     1561 gaggggacgg cgagccgaac ccaggcgctg ttcggcccga tgtcgatgta tctcgcggga
     1621 tacgggcaat acgccacgac gtcgctgctc tcacctgagc aatgcagctt cggcggccgc
     1681 ttcttcggcc gtgcctacga cccttcccaa ttgttaggtg acagctgcta catgggcaac
     1741 gctgagctcc gctttgatct gccgacgttc tggaacgtca gcttggctca gctttacggg
     1801 ttcacggacg gagcagagct gttcacgcgc gagccaggtt tcggcttccc gtcttggcaa
     1861 cgcgcggcct ccgcgggtgc gggcgtgcgg ctcggctggc tcaacgacct gaatgccgat
     1921 ctcacggttg ccaaggcgat cgacgggccg cgcgatgata cgcggttctt cttcgctgtg
     1981 accggcaagt attaagggac cggaagaatg aaccgtcgcc ttcatcgact tctcctcacc
     2041 acgacggccc tgatgccgct ggggacatgg ctcgctgtcg ccgatccgct gggcggacag
     2101 gtggtgggtg gcagcgccac catccagggg caggggacat cgatcgtcac ggtgacgcag
     2161 tcctcgcaga acgccatcat taactggaac acgttcaaca tcggtgccgg cgagaagacg
     2221 aacatcaata tgccgaatgc gtcttcggtc ggcctggagc gggtaacggg caatctcggg
     2281 ccgtctacga tcaatgggag cctgtggtcc aacggcattt tgttcctggt caatcccaat
     2341 ggcatcatgt tcgggcaggg tgcgcaggtt aacgtgagcg gattgctcgc caccactcac
     2401 gacatcaagg acagcgactt catggcgggc cgctataact tcaacatttc cggcaaccca
     2461 gccgcctcga tcgtgaacca gggatccatc acggcggcgc agggggggtt cgcggcgttg
     2521 gtcgcgcccg gcgtgcgcaa taccggcaca atcacggcaa cacttgggac cgtcggtctc
     2581 gccgccggca acggcttcac cctcgacatg tacggcgaca agctgattac gctggcggtc
     2641 ggcgacagtg tcgccggcca ggtcacggat gtggcgaccg gccagccttt gacctcgctc
     2701 gtgggcaact ccggtaaact cagcgccaat ggcggcaagg tggagatcac ggcggccgcg
     2761 gccaagaccg tggttgattc agtgatcaac aataccggtg tgatcgaggc caacaccatc
     2821 gctgacaagg gcggcaccat cgtgcttggc gccgcgacgg acaaaagcaa gcccgctggc
     2881 gcgcccgccc agaatgtgaa gcttgcgggg actatctcgg cgtcgggcaa gaacgcggga
     2941 caaaagggcg ggaccatcaa ggtcgcaggc gagaacatcg cgctcaatgg tgcgaagctc
     3001 gacgcgtccg ggcaggccgg aggcggcact gtgctggtgg gtggcaaagg caccacagca
     3061 accgcaacga ctgtgacggc ggatgcagcg acgacgatca atgcgtcggc gacccgcaac
     3121 ggcgacggcg gcacagtcgt ggtgtgggcc gaccagctca cgagcttcgc cgggctgatc
     3181 aaggcgactg gcggggagct cggcggcaat ggcggatttg tggagacgtc cggggccgca
     3241 gtcaatttcg ccaacatcac ggtcgataca tcggcaaaag ctggcgtgtc cgggacctgg
     3301 cttgttgatc cgacggacct cacggtcgac gacagtgcgg cggcaacgat cacgaagaac
     3361 cttgccacca ccaacgtcac gctgcagacc aacaccgacg gcgccatcgg accgggcatc
     3421 cgcaccaatg gccccggcga catcatcatc aacgcgccga tctcgtgggc aagcaacagc
     3481 acgctttcga tcaacgccat taacgccatt accgtcaatg cgccgatcac cgtcaatgcg
     3541 tcgacctcgg ggaacagcag cggcaatctt ttgctcacct cgacttttaa ctcgatcacc
     3601 gtcaacgcgc cgatcaccgt caatgcgacg aacgcagcgg cgagcaatct tgcgctcaat
     3661 gccgctttgg gcgcggtcac cgtcaatgcc acgatcacca tcggggggca taatgggatt
     3721 agtatgtccg tggcgggtaa tcccaacgcc ccgcgggcgc ggcagctgag ctttggcaac
     3781 ggcgggagcg ttcagttcac cggtaccccg aggactggtc agtcactgtt catcaataat
     3841 caaggctaca cgttgctcta ctccatggac gatgtgcgga gcatcaatgc cagtgcggcg
     3901 aatctggggg gaacttacgc actcgcgaag ccgctcgatg caaaaggggt tacagactgg
     3961 acgccgattg ggagtagcac caggccgttt accggagctt ttcagggact cggcaacacg
     4021 atctccaacc tgaatatcaa tttgccgacg acaaccggcg tcgggctgtt cggctcaata
     4081 ggccaagggg gtcttattca aaacttcggt ctcgttggcg ggagtgtgaa tggccaaatc
     4141 accgtaggcg aattggccgg gttcaacaac ggcggcacgg tgatccagtc ttacgccacc
     4201 gggacggtga gcggttcgga tatggtgggc ggcttgatcg gactgaattc cggtgccgtg
     4261 atacaatcct ccgcgaccgg cccggtgagc ggcgccacga ctgtgggggg gctgattggg
     4321 tggaatacaa acgtcgtctc gcaatcatat gcaaccggta cggtgaacgg cgcctccggt
     4381 actgagggcg gcctggttgc gctcaattcc ggcaacatca cgcaatccca cgccaccggc
     4441 gccgtcgccg ccggagggag tgcggaggtg ggcggccttg tgggcttcaa tacgggcgga
     4501 gcgatctccg gctcctatgc aagcggcacc gtcactgtcg gagagttttc gaatgcgggc
     4561 ggccttgtcg gcctcactca gggcggctcg atgtctgcct cttatgccac cggggcagtc
     4621 agtagcaatg ccgccaatgt cagtctcggc ggcctcgttg gtttgaactt ttcgggggca
     4681 atcaccggtt cacaggccta tggcgccgtt tcgtcgaccg caaatcttct acccaacaac
     4741 gccaattgct ccagcggtgg ctgccagttc gtcaatgtcg gcggtctggt tgggcagaac
     4801 tatggaacga tctccggtcc aagctgggcg acaacgccca ccgcctgcaa cgccgggttc
     4861 acctgttcta acgggaccgt caccgtcggc tccggggcag ttggcggagg tcttgctggc
     4921 tccaatgacg gcatcatcac caacgcgttt gcgatcgcga gcgtcgtcgg tgcagccggc
     4981 accggcaccg ttagcaacgg caatcagacg acgctcggcg gcctcgtcgg caaaaacaca
     5041 gggcaaatca cgaattcgtt cgccgccagt accatcggct caccggcgac ctcagccctt
     5101 gaggttggcg ggctggtcgg cagcaacaac ggcatcattt cgggatcgtt cgccagcagc
     5161 gcggtgtcag ctggtgacaa cagcgttgtc ggtggtctcg tgggcagcaa tcagcccaac
     5221 aacaatccca gttgcaacgg ctgccctgtg ggcgttggcc ataacaacac tgcgaccatc
     5281 accaattcca acgcctttgg cgatgtcaca ggcggcgcat cgagcatcgc cggggggctc
     5341 gcgggattcg ccggcggcac ggacggtagc cttggcggcg gatcggtttc aaataccacc
     5401 gcccatggcg ccgtcatcgc cggaaacaac agctttgtcg gtggcttaat cggcgtcgcc
     5461 gccaccacga tctcctcttc gtccgcacac aatccgagcg tcgcaagcag cggctcgaac
     5521 agcatcgtcg ggggcctcgt cggcttcaac gccgggtcgg tgacaacttc aagttcgacc
     5581 accccggtca gcggaacggg gaacagtt
//
LOCUS       DATILV010000039         4060 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_10074, whole genome shotgun sequence.
ACCESSION   DATILV010000039 DATILV010000000
VERSION     DATILV010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4060)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4060)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4060
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10074"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(570..1847)
                     /gene="oxlT"
                     /locus_tag="VLJ17_00835"
     CDS             complement(570..1847)
                     /gene="oxlT"
                     /locus_tag="VLJ17_00835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxalate/formate MFS antiporter"
                     /protein_id="HSV21553.1"
                     /translation="MAMASASGPAATAQVSEATRWGQLLFGIICMVMIANLQYGWTLF
                     VNPIDQKYHWGRAAIQIAFTIFVLTETWLVPFEGYMIDKFGPKIMVACSGGLVAIAWV
                     INSMADSLFLLYVGAAIGGIGAGVIYGASVGNALKWFPDRRGLAAGLTAAGFGAGSAL
                     TVIPIANMIQSSGYEEAFLWFGLGQGIVVVLVALLLKAPEAGEVPAPASPAVQQTRRD
                     YGPAEAIRTPVFWVMYAMFVMVGAGGLMAIAQLAPIANDYKIASVPVSLLGLTLPALT
                     FALTIDRVLNGLCRPFFGWVSDHIGREHTMFVAFFIEGVGIYALLYFAANPVLFVILS
                     GLVFFAWGEIYSLFPATCTDIYGRKFATTNYGMLYTAKGTASLLVPLANVLTNATGSW
                     HAVFYVAAILNIIAAVMALFVLKPMRIRTMARS"
     gene            3504..3752
                     /locus_tag="VLJ17_00840"
     CDS             3504..3752
                     /locus_tag="VLJ17_00840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21554.1"
                     /translation="MEWPGRAPASVTTTLHRSRGGQFVAHVAALPGNPDDGHTRARQE
                     FQLIYVPLSMCNPNITIQSAPKEMPSIRAIAASSIQHS"
BASE COUNT          912 a         1174 c         1198 g          776 t
ORIGIN      
        1 acttggcagc gaagaaacgg atcaaccgga agattgtcct tgatgccctt gctcgcaagc
       61 tgcccccgtt cagttaaatg tgctcaatgt gctcaatctg atcaggctgg cgcgccaagc
      121 cgcaaagccc gcctccggcg gctgacggat tcggccatca gcctgagcga ggcgaagtca
      181 atcgcgaccg tgcaacgcga gagagtgtgt gtaacagcct ccgacctgtc taaaacaagc
      241 gtgaggatcg caaaggcgtg ccttaatttt ccagtctctt ttaaaatgga ctttcccaaa
      301 gcttcaaaat gttagtatca agccatcatc aaacgctggc acaatggtga gaagaaatac
      361 catggaaaga atgacgccga taaaactaaa cagacaaacc gcgtcgaatg acgagtcgaa
      421 tacggcgtcc cacctcttcc agtcctgaga atttgcttgt gacagctgta cgggcatgat
      481 tcctccctgc gtctaagacg aaattttgat ttcgtcgggg gtgaggctct caatcaaggt
      541 gacttggaca tgattgcacc cgcgccgcat cagctccgtg ccatcgtccg aatacgcatc
      601 ggcttcagta cgaacaatgc catgaccgcc gcgatgatat tgaggatcgc cgcaacatag
      661 aacacggcat gccaactgcc ggtcgcattg gtcagcacgt tggcgagcgg gacgagcaac
      721 gatgcggttc ccttggcggt gtacagcatg ccgtagttcg tggtcgcaaa cttgcggcca
      781 tagatgtcag tgcaggtcgc cgggaacagc gaatagatct ctccccaggc gaagaacacc
      841 aagcccgaca agatcacaaa aagtacgggg ttggcggcga aataaagcaa cgcgtagatg
      901 ccgacgcctt cgatgaagaa ggcgacgaac atcgtgtgtt cgcggccgat atggtcagag
      961 acccagccga agaacggccg gcacaggccg ttgagcacac ggtctatcgt tagtgcgaag
     1021 gtaagcgccg gcagcgtcaa tccaagaagc gacaccggta cgctcgcgat tttgtagtcg
     1081 ttggcaatgg gcgcgagttg cgcgatcgcc atcagaccgc cggcgccgac catgacgaac
     1141 atcgcgtaca tgacccagaa caccggcgtc cggatcgcct cagccgggcc gtagtcgcgc
     1201 cgcgtctgct gcacggccgg gctggctgga gccgggactt cgccagcctc aggtgctttc
     1261 agcagtagcg cgacaaggac aacaacgatg ccctgcccga ggccgaacca caggaaggcc
     1321 tcctcgtagc cgctcgactg gatcatgtta gcaatcggga taacggtcaa cgcggagccg
     1381 gcaccgaatc ccgcagcggt caagccggcg gcaagtccgc gccggtcggg gaaccacttc
     1441 agagcattgc cgaccgaagc tccgtaaatg acgccggccc caataccgcc aatcgcggca
     1501 ccgacataga ggaggaaaag cgagtcggcc atcgaattga tgacccaggc aatcgcgacc
     1561 aaaccgccgc tgcacgcgac catgattttt ggcccgaact tgtcaatcat atagccctcg
     1621 aagggcacca gccaagtttc ggtgaggacg aaaatggtga aggcgatttg gatcgccgcc
     1681 ctgccccaat gatatttctg atcgatcgga ttgacaaaca aagtccatcc atattgcagg
     1741 ttggcgatca tcaccatgca gatgatgccg aataggagct gaccccagcg cgtcgcttcc
     1801 gacacctgcg ccgtcgcggc gggtcccgat gctgaagcca tcgccattga atcagttccc
     1861 atgtgtcctg cgtcgacgca ccatgcgagt gcgtgcgcaa accgccgtat cgtcacggcg
     1921 taaaatccgt cacggacaga gtgcgtcctc gtgatcagga taggagcttc gatggaaagg
     1981 agtattcgta tcgatcgggt ggtaatacta cgaggtcacg catccgaggc gcattgcctg
     2041 ccgcgcgagc gcggcgacgc actctgagcg tgtagcacgc cgcagcagca gatctgcgac
     2101 gccgtacgat tccatgcttg gacctgcgtc ctacgggtca ccaccacgca gctcttgcac
     2161 tcagtcgcgg ctcggtgcca cagtcacgcg ccccatccga aggctgccgg cacgacagcc
     2221 gcagtacccc aacaggcggc cttagcaggc gcagtcagga atcctctgct gggggcctca
     2281 tcgcaggaac aatcgagagg ccaaatgcgc atcgtggtag ttgggacctc gggggctggc
     2341 aagacagcca tggccgcgag catcgctgcc gcgcttaagt tgccgtgtat agaactcgac
     2401 cgtctccatt gggaaccaaa ttgggaggcc ctgtctgaga ctcatccgga cgaatttgtt
     2461 cgtagggtga gcgctgccat atttgcatct gatgcgtggg taagcgatgg aaattacggt
     2521 gtggtccgtg acttgatttg gcgaactgcg acacatttgg tctggctgga ttacagtcgt
     2581 gtagtcgtta tgtatcgtgt catcaaacgg tcaattgccc gcgcgttcga tcaaaaggag
     2641 ctttggggcg gaaacagaga agattggcgc cgctggttgc gaccaagcca ccctatcaga
     2701 tgggcttgga gtacgtggag aggacggcgc ttacggtttg agcagctctt gggcaatgcg
     2761 gagtacaagc acctagtggt actaaggttg cggaccccac gcgatgcggc aaagctgatt
     2821 gatcagctta aggtgagcgc gacctaattg tgaagttgcg ttccacttac ggaagtctcc
     2881 gtcgggtcca ggacctgacc ttagcgccgg actacgatct cactagactc gtcttcgggc
     2941 agggcggttg aaagccacca tccgtctccc ctgaatcagc acgtatcatc gattgagtcg
     3001 tcgatacgaa atgaccgtac ggcatccaaa ttgccacgtg caaacacggc ggccaggcgt
     3061 cgaccagcat cttcgccttg aggtccggtg caggagataa aggctgcgac gcatacgaac
     3121 tttgcgggcc aaataaaccc atgccgctca agcttgaaga ggcggcgcgc aagatgacct
     3181 cttttcccgc tcggcggctc gggctcaacg aggcatgaga gcggatattg tggtgctcga
     3241 tcccgcgcgg gtgcgcgaca ccgccacgtt agacggccgc gcatccgagc cgggtcctct
     3301 acggtccagc tcccggttcc aagccagagc cgtaagtatc gccgtcgagg cccgtccagg
     3361 gcttgtatct ggaaccccac tcttccagtg ccgagaagaa acaggaagta gaattcgggg
     3421 ctggtcggta ttcgagtggt cgtgatgggt cggccgaaag gcgcaagacg tgaacttggg
     3481 cgaaaggacg atcatgtctc ctaatggaat ggcccggccg tgctcccgcc agcgtcacca
     3541 ccacgctgca tcgctcacgc ggcggccagt tcgtcgccca cgtggccgcg ctgcccggaa
     3601 accctgacga cggccacacg cgcgcccgcc aagaatttca gttgatttac gttccgctca
     3661 gcatgtgcaa tccgaatata acgatccaga gtgctccgaa ggaaatgccc agcatccggg
     3721 cgattgccgc gtcttccatc caacactcct gattagcctt tcatgaataa cggcgcggaa
     3781 ttgatttggt tcaaaacatt ctttgttgcc atggcagagc gacaggcagc ccgcgaaggt
     3841 ggcggatgga caactttggt ggggctggcc cacttctgtg tagatcgtcg atgtccgaat
     3901 cggccctgca accgggacgc attgactcgg cggcagcggg ggctgcgcct cgactgggcg
     3961 accggcaggt caagggcctg gtgcgcgtgc ggctcgatca actccagccg cggaaatgtg
     4021 gtcaccaggg tttcgattgt gtttgccgtt ctggacctca
//
LOCUS       DATILV010000040         4553 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4610736, whole genome shotgun sequence.
ACCESSION   DATILV010000040 DATILV010000000
VERSION     DATILV010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4553)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4553)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4553
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4610736"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..170)
                     /locus_tag="VLJ17_00845"
     CDS             complement(<1..170)
                     /locus_tag="VLJ17_00845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018260382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase N-terminal
                     domain-containing protein"
                     /protein_id="HSV21555.1"
                     /translation="MPIYKAPVEDTLFLLNDVFHIERFANLPGFADASPDVVEAILSA
                     AGKFCEDVLTPL"
     gene            522..3728
                     /locus_tag="VLJ17_00850"
     CDS             522..3728
                     /locus_tag="VLJ17_00850"
                     /inference="COORDINATES: protein motif:HMM:NF019843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21556.1"
                     /translation="MKRVPWHVKGVRPEVREVARDAARRSGLSVGAWLDSLIVDAAGQ
                     HDAAGGDRRQPAPPDPDTRGQPSRIGDAALAAIRKEIDELKRQMSRSQVRPAIFEQRL
                     HDIEARINALPSSTRGDDVAEILRRHFAEFGDTLKGASPVDDIAKVWRQDLVEISATL
                     RDAMPTSVIVALEEQVRALGERLESHRGAEAGTAATADIEQALAAIRDRLQALTPAEE
                     LAELSHAVKLLSHKADSIATESSAPEKMQQLEHAIGTLQGIANQVASRDVVAALSQDI
                     KALGDKIDCNSRPTLDSDFMNTLERRLAEIAEAVGHFRPNEAASVPANFEATIKALTD
                     RLEAVQIPTADQGVLKGLEQRLDTLVDKLENSETRMASREGIDRGMDELLTQLRELCA
                     QNENKFVAIQQQLATTASEAISGPADSIRRDVASLKEIQTSVDRRTQDTFEAVYGTIE
                     EMVGRLATIEEGLRDSQYVPHAGQSVDLPGWRGEPSASRVQSAPAMVSEAPTLVPSAA
                     PMADRATTRLRQPVVSDFAPDAPLEPGSAALRVRAVANAIDRIAASEAVNGAAKPPET
                     AAPVRANFVAAARRAAQAVASEQQRTPAARFEKPVADPQRNLQAGALRPRLKSIILSI
                     GMMMLVVGGLCLALVLFHNPWAPESGRPVTRMDDAAQPDGESIPSAPEPLTLEQPPTR
                     QGANLDSPTLPVLLNTNMFTAETALGSAPRSGVLPEVAALATVPRPVAAEPPAMIVGT
                     TAAALPEMAAPATNPRQVVTETPAMILGTTAVAPPEVAAPAAIPRPAVTATPTVIPQT
                     TASVPDMGASSLMRNPLLQAPVGRGRASQTAAPSAVPTRDLTEIPLPLTIGGTALIAA
                     ASAGEPGASYEVATRFAQGHNAPQDPAMAAAWFERAARSGLAPAQFRLGTMYEKGLGI
                     KKDLTEARRLYLAAADKGNAKAMHNLAVLYAEGGLDGKPDYAVASQWFRKAADHGIVD
                     SQYNLAILFARGVGVERNTAEAYKWFAVAAKGGDKEAVRRRDEIAARLDPKQLESAKL
                     NVESFVPEPQPEEAITIKAPAGGWDQVAAATTKAKVTR"
     gene            4051..>4553
                     /locus_tag="VLJ17_00855"
     CDS             4051..>4553
                     /locus_tag="VLJ17_00855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HSV21557.1"
                     /translation="MEIYLPIADLPVNVFLVFAMGLAVGFISGMFGIGGGFLMTPLLI
                     FIGIPPAVAVATVSTHIAASSFSGAAAYWRRRAIDLALALMLLVGGIVGTALGVWLFT
                     VLRRLGQLDITIGLSYVLLLGSVGAMMVAEGLRAMLRARQGKLVELRRPGSHTWVYGL
                     LFKIRFK"
BASE COUNT          894 a         1376 c         1421 g          862 t
ORIGIN      
        1 ttgagcgggg tgagaacatc ttcgcagaat ttgcctgccg cgctgaggat ggcttccacg
       61 acgtcgggcg acgcgtcggc gaacccaggc aggttggcga agcgttcgat atgaaagacg
      121 tcgttgagca ggaacagggt atcttcgacc ggcgccttat aaatgggcat ggatgtctcc
      181 tctggcggtc cgtaaaccgt cggcaacgct tcgggcgatt gatgcgatct gaaaccagcg
      241 gaaggtaggc gattctctcc ggcataatcg cataccgcaa cgaactcaaa caggttccgg
      301 ccgggcagga tctgtgcaag tgttcgccgc cagtcgatga agttgcttcg ccggatggaa
      361 atatcggctg caatcgtctg ggtgttaacc ccctctttac cctaatctgg agaaagtctg
      421 gattaaggtt gcggaccatt cgtgcggatt cggggtgttg ccgtccggct gggcctgccg
      481 aacatcccta cccgtccaaa gtcccaaacg tcggagtgag catgaagcgc gtgccttggc
      541 acgtaaaggg agttcgtccc gaggtgcgtg aagtcgcccg ggatgccgca cgccgttccg
      601 ggctatccgt cggtgcgtgg ctagattcgc tcatcgtcga cgctgcgggg cagcacgacg
      661 cggcgggggg cgatcgtcga cagcccgctc cgcctgaccc agatacccgt ggacaaccga
      721 gccgcatcgg cgatgcggcg ctcgccgcca tccgcaaaga aattgatgag ctcaagcggc
      781 agatgtcgcg gtcgcaagtc aggccggcca tttttgagca gcggcttcac gacatcgagg
      841 cgcgcatcaa tgcgctgccg agctcaaccc gcggcgatga tgtcgccgaa atcctgcgcc
      901 ggcattttgc cgaatttggc gacaccctaa agggcgcgtc gccagtcgat gatatcgcca
      961 aggtatggcg tcaggatctg gtagaaatca gcgcgacgct tcgagacgcg atgccaacaa
     1021 gtgtgattgt ggccctcgag gagcaggttc gggcgctggg ggaacggttg gagtcacacc
     1081 gaggggccga agccggcact gctgcgacgg ctgacatcga gcaagccttg gcggctatcc
     1141 gtgaccggtt gcaggcattg acgcctgccg aggaacttgc cgaactcagc cacgccgtca
     1201 agttgctgtc gcacaaggcc gattcgatcg caacggaaag ctcagcgccc gagaagatgc
     1261 agcagcttga gcatgccatc ggtacgctcc aggggatcgc taatcaggtc gcttcgcggg
     1321 atgtcgtcgc agcgctatcg caggatataa aggcgcttgg cgacaagatc gattgtaaca
     1381 gccggccgac tctcgattcc gacttcatga atacgctgga gcggcgtctg gctgaaatcg
     1441 cggaagccgt aggacacttc cgtccgaacg aagccgcttc agttccggcg aatttcgaag
     1501 ccaccattaa ggcactaacc gatcggctgg aagcggttca gatcccgacc gccgatcagg
     1561 gagtacttaa gggcctcgag caacggctcg atacgctcgt cgataagctg gagaattctg
     1621 agacccggat ggcctcccgg gaaggaattg atcgcggtat ggacgagttg cttacgcaac
     1681 tcagggaatt gtgtgcccag aacgaaaaca aatttgtggc catccaacag cagctcgcga
     1741 caaccgcgtc ggaggctatc agcggtccgg ccgattccat aaggcgcgac gtcgcatcgc
     1801 taaaggagat tcagacctcc gtggaccgac ggacgcagga cacgttcgag gcggtctatg
     1861 gcacaatcga agagatggtc ggccgcctcg ccaccatcga ggaaggactt cgagatagtc
     1921 aatatgtgcc acacgcaggt caatcggtcg atttgccagg atggcgtggc gagcctagcg
     1981 caagccgggt tcagtccgcg cccgcgatgg tttcggaagc tccgaccctt gtgccgtcgg
     2041 cggcgccaat ggcggatcgc gccaccaccc ggctgcgtca gccggtcgtg tccgactttg
     2101 cgcccgatgc gccgctcgaa cctggctccg ccgccctccg ggtcagggcg gtggccaatg
     2161 cgattgatcg aattgcagca tcggaggccg tgaatggggc cgcaaagccc ccggaaaccg
     2221 cggcaccagt gcgtgccaat tttgttgcgg cggcgcgccg tgccgcccag gccgtggcca
     2281 gcgagcagca gagaacgccg gcggctcggt tcgagaagcc tgttgcggac ccccaacgaa
     2341 atttacaagc cggcgcgttg aggccgcggc taaaatctat aattctcagc attggcatga
     2401 tgatgctggt ggtcggcggg ctctgcttgg cgctcgtttt attccacaat ccctgggctc
     2461 cggaatcggg ccggccggtt actcgaatgg acgacgctgc tcagcccgac ggcgaatcga
     2521 ttccgtccgc ccccgaaccg ctgacgcttg agcagccgcc gacccgtcaa ggtgccaacc
     2581 tcgactcgcc gacgttgcct gttctcctca acacaaacat gttcacggcc gagaccgcac
     2641 ttgggtcggc accaaggtcg ggtgtcctac ccgaagtggc agctctagcc acggtccccc
     2701 gtccagtcgc cgccgaaccg cccgccatga ttgtcgggac cacagccgct gccctgcccg
     2761 agatggcagc tccagccacg aacccgcgtc aggtcgtcac cgaaacgcct gccatgattc
     2821 tcgggaccac agccgttgcc ccgcccgagg tggcagctcc cgccgcgatc ccgcgtccag
     2881 ccgtcaccgc aacgcctacc gtcatccccc agaccacagc ctcggtaccc gatatgggcg
     2941 cgtcttcgct aatgcgaaat ccgcttctgc aagcgccggt cggtcgcggt cgggcgtcgc
     3001 aaaccgccgc cccgtcggcc gtgccaacgc gcgatctcac cgaaatacct ttgccgctga
     3061 cgattggcgg cacggctctt attgcggcag cttccgcggg tgaacccggc gccagctacg
     3121 aggtcgccac ccggtttgcg caaggccaca atgcacctca ggatcccgcg atggcggccg
     3181 catggttcga gcgcgcggcg cgaagcggct tagcgccggc ccagttccgc ctcggcacca
     3241 tgtacgagaa agggctcgga atcaaaaagg acctgacgga ggcacggcgt ctctatctcg
     3301 cggccgccga caagggcaat gccaaggcga tgcacaatct cgcggtgctt tatgctgaag
     3361 gaggtctcga cggtaagccg gattatgcgg tcgcgtcgca atggttccgc aaggccgctg
     3421 accacggaat cgtcgacagc caatacaatc tcgccatcct gtttgcccgg ggcgttggag
     3481 ttgagcgcaa taccgctgaa gcctacaagt ggtttgcggt ggctgcgaag ggcggtgata
     3541 aggaagccgt caggagacgc gatgagatcg ctgctcgtct tgacccgaaa caattggaaa
     3601 gtgccaagct gaacgttgaa tccttcgtgc ccgagcctca acctgaggaa gcgatcacca
     3661 tcaaagcacc ggcaggaggc tgggatcagg ttgcagctgc aacgacgaag gcaaaggtca
     3721 ctcgttaaaa tgtttccgag cggagtagaa atcgacgctc tctaggccca tgcgctaacg
     3781 ggaaagactt cggatcctat agaagctgaa gtccgcgcct gggcctgcta tatcgggtcg
     3841 gttgcaccgc cagcctggtt gggcggcgaa ttcgcgatga ccatggccaa aaagactttg
     3901 cggttgcacc gcaacgcgat cccgatttag cttgggtatc tcacacggct tcgtttgaga
     3961 tatcagggtt agcaggccgt cgcgattcca cggcgacccg cccattatgg cgaatctgtg
     4021 cgtcaaacga gataccgtcg gatcgaacct gtggaaatct accttccgat cgccgatctg
     4081 ccggtcaatg tatttctggt gtttgcgatg gggctagcgg tcggcttcat ctccggtatg
     4141 ttcggaatcg gcggcggatt tctaatgacg ccgctgctga tctttatcgg cattccgccg
     4201 gcggtcgcgg tggcgacggt atcaactcat atagcggcct cctcgttttc cggcgcagcc
     4261 gcgtattggc gccgtcgcgc gatcgacctt gcgctcgcct tgatgctgct cgtcggtggg
     4321 attgtcggga cggcattggg cgtctggttg ttcacggtat tgcgtcggct tgggcaactc
     4381 gacatcacca tcggactctc ctacgtgctg ctgctcggat cggtgggcgc catgatggtg
     4441 gccgagggcc tgcgggcgat gctgcgcgcg cggcagggca agctcgtgga actgcgtcgg
     4501 cctggcagcc atacctgggt ctatggtttg ttattcaaga tcagattcaa aca
//
LOCUS       DATILV010000041         2036 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2566386, whole genome shotgun sequence.
ACCESSION   DATILV010000041 DATILV010000000
VERSION     DATILV010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2036
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2566386"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(67..1425)
                     /gene="pcaB"
                     /locus_tag="VLJ17_00860"
     CDS             complement(67..1425)
                     /gene="pcaB"
                     /locus_tag="VLJ17_00860"
                     /EC_number="5.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047472 - 3-carboxy-cis,cis-muconate
                     cycloisomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-carboxy-cis,cis-muconate cycloisomerase"
                     /protein_id="HSV21558.1"
                     /translation="MTTVGVSSGIFRDIFSTEPMRRIFADENRIQKYLDIEAALARTQ
                     ARLGIIPQDACDEILRHCSIAEYDFAKLKTQTERIGYPVLPVVQQLVALCRDGLGEWC
                     HWGATTQDITDTAMILQIREALDLVEADLVAISDGLAALAQRYRDTPMAGRSNLQQAV
                     PITFGYKVATYLAAFERHLQRLKELRPRVLVGEFGGAAGTLASLGNRGLEVQAALMQE
                     LDLGQPEIAWHTVRDCIAEVGCFLGLVTGSCGKIALDVKLLMQTEVEEVYEPFHEGRG
                     SSSTMPQKRNPISSVYITATTSLVRQHVAALLDAMVEDHERATGPWEIEWIAVPEIFS
                     LASGALAQTRFVVSGLQVDEKKMRANLDITRGLIVSEAVMMGLGPHIGRQYAHDLVYD
                     ICRKVITTGRALLDLLAEDKEIAKHLDRAALEKLCDPANYLGQAGEMVDRALARRQKA
                     MS"
     gene            1682..1942
                     /locus_tag="VLJ17_00865"
     CDS             1682..1942
                     /locus_tag="VLJ17_00865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HSV21559.1"
                     /translation="MIVCSCNVISDHQVRSVTAERTVRATSEIYRCLGCSAECGRCTR
                     TIRRIMDEALGALGSHLTTGACICGSPETRPSGNSAEARSRD"
BASE COUNT          405 a          600 c          640 g          391 t
ORIGIN      
        1 ttcaacacgc cccagggatg gggggaaggc ccatacgagc tgctgctcac agtcgggcag
       61 cgctgatcag ctcatcgctt tctgccgccg cgccaacgcg cggtcgacca tttcgccggc
      121 ctggccaaga taattcgcag gatcgcagag cttttcgagc gcggcgcgat cgaggtgctt
      181 ggcgatctcc ttgtcttcgg ccagcaaatc gagcagcgcg cggccggtgg tgatcacttt
      241 gcggcaaatg tcgtagacga ggtcgtgggc atactggcgg ccgatgtgcg ggccgagacc
      301 catcatcacg gcttcggaca cgatcaggcc gcgggtgata tcgaggttcg cccgcatctt
      361 tttttcgtcg acctgcaggc ccgagaccac gaagcgggtc tgcgccaggg cgccggacgc
      421 caagctgaag atttccggca ccgcgatcca ctcgatctcc catgggccgg tggcgcgctc
      481 gtgatcctct accatggcat ccagcagtgc ggcgacgtgc tggcggacca gcgacgtggt
      541 cgccgtgata tagactgagg agatcgggtt gcgcttctgc ggcatggtgc tcgatgagcc
      601 gcggccttcg tggaacggct catagacctc ctcgacctcg gtctgcatca gcagcttcac
      661 gtcgagggcg atcttgccgc agctgccggt cacgaggcca aggaaacacc cgacttccgc
      721 aatgcagtcg cgcaccgtgt gccaggcaat ctcgggctgt ccgagatcaa gctcctgcat
      781 cagggcggcc tgaacttcga ggccacggtt gccgagcgat gccagcgttc cggcggcccc
      841 tccgaactcg ccgaccagaa cgcgggggcg caattctttc aggcgttgaa ggtggcgctc
      901 gaacgccgcc agataggtcg caaccttgta gccgaaggta atcggcaccg cctgctggag
      961 attgctacgg cccgccatag gggtgtcgcg gtagcgctgc gcgagcgccg caagcccatc
     1021 cgagatggcc accagatcag cctcaacgag atcaagcgct tcgcggattt gcaggatcat
     1081 agcggtatcc gtgatgtcct gagtggtagc accccaatga caccattcgc cgaggccgtc
     1141 ccggcacaag gcaacgagct gctggacgac cggcagcacc gggtagccga tgcgctcggt
     1201 ctgggtcttg agcttggcaa aatcgtattc ggcgatcgag caatggcgaa ggatctcgtc
     1261 gcatgcgtcc tgtggaatga tgccgagacg cgcctgtgtg cgggccagcg ccgcctcgat
     1321 gtcgagatat ttctggatgc gattttcgtc ggcaaagatg cggcgcatcg gctcagtgga
     1381 aaaaatatcg cggaagatgc cggaactcac tccaacggtg gtcattctgc agcctttcga
     1441 ggatggcagt gccgatcggt cgtcatccgt acaaaacggc cgagcgaacg tctatgtctg
     1501 acggtccgga gaagctaaca gattagaatc attatatttt acagtttaga acgatttcat
     1561 ttcatagagc ttgctaggcg tcaccgcaaa atggcaagga tacgttctcg tccggaagcg
     1621 atgcgctcgc aagtgcatcg gcgaaaatgc agcaatggcc ggatgaattg ggagcgcctt
     1681 cgtgatcgtg tgttcgtgca acgttatctc ggaccaccaa gtccgatccg ttacggccga
     1741 acgcaccgtg cgggcaacca gcgagatcta tcgttgtttg ggatgcagcg ccgaatgtgg
     1801 ccgttgtacc cgcacgatcc ggcgaatcat ggacgaggcc ctcggcgcgt tggggtcgca
     1861 cctcacgaca ggcgcctgca tttgcggttc accggaaaca aggccatccg ggaattcggc
     1921 tgaagcgaga agccgggatt gagcgcaggc ttgtcgatgg atatccacac gccgccaaac
     1981 catggggcgg caacgcgctc ggacctcttg atgcaatgca acattattgc gtaggc
//
LOCUS       DATILV010000042         5629 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3333364, whole genome shotgun sequence.
ACCESSION   DATILV010000042 DATILV010000000
VERSION     DATILV010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5629)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5629)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5629
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3333364"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..712
                     /locus_tag="VLJ17_00870"
     CDS             <1..712
                     /locus_tag="VLJ17_00870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21560.1"
                     /translation="LRAAFVLVTLALILPGALCAADATPDLSGIYWATEYHAKIQVVG
                     GGELPLTPEGKAAYDKNIAGLKDGSIIDNARRLCVPDGLPRVLANPYPFEIVYGPPGQ
                     ITIIYELSHQIRPVAMDKPMPSEDELETWPFYNGHSVGHFEGDTLVIETAGFNEKTFV
                     DATGAPHTDELRTVERIRKISPNELEDVITIHDPKYYTRDWQARFIYRLRNDIRIEDY
                     NCGEPHRDLSSVAGVRRP"
     gene            890..1765
                     /locus_tag="VLJ17_00875"
     CDS             890..1765
                     /locus_tag="VLJ17_00875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21561.1"
                     /translation="MQFPSNVERIQHATILTFVTFIGVAAVVPVLAQTPTKDVIPNLA
                     STRFAWLSGADWFDPPPGTGRGPIRQDPDYPYVGNVGANGRQVTVRLGNHKDPVLKPW
                     AAKQMRESNEEVISGKRSVGFAAQARCYPGGVPGQLLYPAEPMYFIQNPKQVWMIWQR
                     DHMVRRIYLTDKHSENVQPSWFGESIGRYENGELVVDTIGLSAKNSYIDNLRTPHTEK
                     EHVIERFKLSMDGNTLEAYVIVEDPDTFNEPLHMVQRWRKVKNPLLETVCAENNGDHF
                     KQNLFPLPEATTPDF"
     gene            1847..2656
                     /locus_tag="VLJ17_00880"
     CDS             1847..2656
                     /locus_tag="VLJ17_00880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014492753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HSV21562.1"
                     /translation="MGALTKSSFTKIAIGTALLIGSAYPIFAADALHDVVPTGALRVA
                     IAVGPAASTFWATRDPASGQARGVTVELAKAAAAKLRVPLKLVEYQNSGEIAAAAAKD
                     VWDLSFMPADAEREKFVDQGPPYVVYESTYLVRAGSDIKTLADVDRPGIRVGAIEGTA
                     TSRTVARSLKRASLATFPKPEAAAELLGKGALDALAMGTEALVDLAKGLPGTRVLEEP
                     VQSTGVVVTVPKNRPATRDWAVRFVEEAKQDGTVRRAFDSAGFAAVPVAPP"
     gene            2990..3066
                     /locus_tag="VLJ17_00885"
     tRNA            2990..3066
                     /locus_tag="VLJ17_00885"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3024..3026,aa:Asp,seq:gtc)
     gene            complement(3647..4996)
                     /locus_tag="VLJ17_00890"
     CDS             complement(3647..4996)
                     /locus_tag="VLJ17_00890"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase family protein"
                     /protein_id="HSV21563.1"
                     /translation="MKFTTQSIDNLRLPQGKTDQIAWDDDVPGFGLRLREGGSRNWVF
                     QYALGKKQRRMSLGSAAAITLVKARETAIELYAKVKLGHDPAGEKEQRKRQASEMFEA
                     VAKSYLALRKREMRPRAYDQIDRHLLKYCKRLHGLQLAGITQRTIATQISEIRDTSGD
                     VQANRARSSLLAFYGWAMEEGIVTENPVANTRRFEEKSRERTLTDAELREVWESAGND
                     HYGSIVKLLMLSGQRAEEMAGLRRSEIGKTEVPKARINGIELPAFTIDAIALPPERTK
                     NKRPHIVPLSAPDGERWATCAKPLPAQEILEKQPRRVNHNGKLRDLVFGIGERGFSGW
                     SKCKERLDERIHAARIKAWEEAGGQGDKPGPMSRWTHHDLRRTMATIMNDRLGIAPHV
                     VEAILNHVSSRQSDKSGVPGTYNTALYLRESTEALRMWADHIMALVGANVVSLKRAR"
     gene            5387..>5629
                     /locus_tag="VLJ17_00895"
     CDS             5387..>5629
                     /locus_tag="VLJ17_00895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21564.1"
                     /translation="MAAYVDGEWMMPVSSATIKTLSAIFCLSLVMPLQLARAQSPVKQ
                     QVLSYEEKKRQANDIAVTIVVSGLSCTCARFAEDIKN"
BASE COUNT         1084 a         1782 c         1656 g         1107 t
ORIGIN      
        1 cctgcgtgca gccttcgttc tggtcacgct cgccctcatc ttgccagggg ctctttgcgc
       61 ggccgacgcc acccctgatc tttccggaat ctattgggcg accgaatacc acgccaagat
      121 tcaggttgtc ggaggcggcg agctgccgct gaccccggag ggcaaagcag cctacgacaa
      181 gaacatcgcc ggcttgaagg acggttcgat catcgacaat gcccgcaggt tgtgcgtgcc
      241 cgatggcttg ccgcgggtgc tggccaaccc ttacccattc gaaatcgtct acggcccgcc
      301 cgggcagatc accatcatct acgagctcag ccaccagatc cgcccggtcg ccatggacaa
      361 gccgatgccg agcgaggacg agttggaaac gtggccattc tacaatggcc actcggtcgg
      421 ccatttcgag ggtgatacgc tggtgatcga aaccgccggc ttcaacgaaa agaccttcgt
      481 ggacgccact ggtgcaccgc acaccgacga gttgcgcacc gtcgaacgta tccgcaagat
      541 aagtccgaac gagctcgagg acgtcatcac cattcacgat ccgaaatatt acacccgcga
      601 ttggcaggcg cgcttcatct acaggctgcg caacgacatt cgcattgagg actataactg
      661 cggcgagccc caccgcgacc tttcctcggt ggcgggcgtg cgccgcccat aaggtcgcag
      721 gggtgggcaa agcgaggcgt gccacgccaa cgccggcggt gggcccggcg cgagagggcg
      781 tactcggcga gacaatgcca cacgcctttg cctgccctac acagtttcgc tcaaccgaat
      841 ccgcgcccgg ggcagcgcag cgttccagag gaaaatgaga ggtccgacaa tgcaatttcc
      901 ttccaacgtc gagcgcatcc agcacgccac catactcacg ttcgtgacct tcatcggcgt
      961 cgcggcggtc gtcccggtgt tggcgcagac cccgactaaa gacgtgatcc ccaatctcgc
     1021 gtcgacccgt ttcgcatggc tgtcgggcgc cgactggttc gatccgccgc ctggcaccgg
     1081 ccgcggcccg atcaggcagg acccggacta tccgtatgtg ggcaatgtcg gggccaatgg
     1141 caggcaggtg acggtgcgtc tcggcaacca caaggatccg gtgctcaaac cctgggccgc
     1201 caagcagatg cgcgagtcga acgaagaagt catcagcggc aagcggtcag tcgggttcgc
     1261 cgcccaggcg cgctgttatc cgggcggcgt gccggggcaa ctgctctatc cggccgagcc
     1321 catgtatttc attcaaaatc cgaagcaggt gtggatgatc tggcagcgcg accacatggt
     1381 ccgccgcatc tatctgaccg acaagcattc ggaaaatgtg caaccgtcgt ggtttggcga
     1441 atccataggc cgctatgaga acggcgaatt ggtggtcgac accatcgggc tgtccgccaa
     1501 gaacagctac atcgacaatc tgcgcacgcc gcacacggaa aaagagcatg tgatcgagcg
     1561 cttcaagctg tccatggacg gcaatacgct cgaggcctac gtgatcgtcg aggaccccga
     1621 caccttcaac gagccgcttc acatggtgca gcgctggcgc aaggtgaaga acccactgtt
     1681 ggaaacggtg tgcgccgaga acaacggtga tcacttcaag cagaacctgt tcccgcttcc
     1741 ggaggccaca acaccggatt tctgatgaac cgcgccggac gcaacagggg cgcagaaacc
     1801 ttcccggctt gccggggagg aaatagccaa agggaaatag atcgctatgg gcgcgctcac
     1861 caagtcgtcg ttcactaaaa tcgccattgg cacggccctg ctgattggct ccgcatatcc
     1921 cattttcgcg gccgacgcgt tgcacgacgt cgtccccacc ggcgcgctgc gcgtcgccat
     1981 cgcggtcggc ccggcggcat cgactttctg ggccacccgc gatccggcat ccggacaagc
     2041 gcgcggcgtt accgtcgagc tcgccaaagc cgccgccgcg aagctgcgcg tgccgctaaa
     2101 gctcgtcgaa tatcagaact caggcgagat cgctgctgcc gccgcgaagg atgtgtggga
     2161 tctctccttc atgccggccg atgccgaacg cgaaaaattc gtcgaccagg ggccgcctta
     2221 cgtggtctac gagagcacct acctggtgcg ggccggctcc gacatcaaaa cccttgcgga
     2281 tgttgatcgt cccggcatcc gggtcggcgc gattgaaggc acggcaacgt cgcgcacggt
     2341 ggcaaggtca ttgaaacgcg cctccctcgc cacgtttcca aagcccgaag cggctgctga
     2401 actgttggga aaaggcgcgc tcgatgccct tgcgatgggt accgaagcct tggtcgacct
     2461 cgccaagggc ctgcccggca cgcgcgtgct cgaagaaccc gtgcagtcga ctggggtcgt
     2521 ggtcacggtg cctaagaacc ggcccgcgac ccgcgactgg gcggtgcgct ttgtcgagga
     2581 ggccaagcag gacggcacgg tgcgccgagc gttcgacagt gctgggttcg ctgccgtgcc
     2641 ggtggcaccg ccttgaaggt gagatcatca aaggcgcgcg gtgcgggctc aacggcgagt
     2701 gggaaggcgg cactggcgaa gttggtgcga tcgtaccggg tcgacgggtt gagctgatcg
     2761 gcccggacga gaagccggca gcgcccggcc acagcggacg ggtccgtatt ttcgcctcct
     2821 ccgggccccc tacccttttt caaactcacg gagccacaag ccagcaggcg cagcgattga
     2881 ggggcgcaga gggcccccga tacctccccg tccgggcgat gcttgacttc aattctgccg
     2941 ggtcgtatcg aaccaaaccc gacgctgtga ggtttacgcg cggcatcgcg ggggcgtagc
     3001 tcagttggtt agagcgctag cctgtcacgc tagaggtcgc gggttcgagc cccgtcgctc
     3061 ccgccagaaa aatcaaagat ttagtcgaag tttcagagcc ctaatcttcc cagaaaatcg
     3121 aaccgggaag gccatgggaa gcggcggaat gccctggggg tcagtaaatg agaagtttcc
     3181 aagctccgcc aagccactga tgaccagagc gcggcgtcgt tagctgaaat cgaagacccg
     3241 aacgacgacg ccgcaagcct tactccggac gggggcgttt atctgaagcc tggcagggcc
     3301 agaactgcca aacagcttcc gttccgtttt ctgatcgagg gtgccgccct cagtctctgg
     3361 tgccggttgc cttgcggcgg ccgatgcggt cattccatcg gcgatcatga ccgcgaccat
     3421 cacatactcc gctggggctt gccgcaaggt catccttact gacgagatgt attcccctcg
     3481 ttttgctttg tcgtcgtcat tgagaactcg aagctctcgt gcgcgatctt caattccgcc
     3541 ttggccctcc ccgggctgca ctcgagacga tcgcggatca tttcttgcgc accggccggc
     3601 gcaatccatt gctcggcgct gttgtcacca catccatagc ggtcactcag cgggcgcgct
     3661 tcaatgacac gacgttggcg ccgaccagcg ccatgatgtg atcggcccac atgcggagcg
     3721 cttcggtact ttcccgtagg tacagcgccg tgttgtaggt gccagggacg ccactcttgt
     3781 cgctctggcg gctcgacacg tggttcaaaa tggcctcgac cacatgcggc gcaatcccga
     3841 gccgatcgtt catgatggta gccatagtcc gccgcaggtc gtggtgcgtc caacgcgaca
     3901 tgggccccgg cttatcgccc tgcccgccgg cctcctccca cgcctttatc ctggccgcat
     3961 ggatgcgctc gtctagccgc tccttgcact tcgaccagcc agagaaaccc cgctcgccga
     4021 tgccgaacac caggtcgcgg agcttaccgt tatggttcac ccgacgcggc tgcttttcca
     4081 ggatttcctg cgccggtaaa ggtttcgcgc atgtggccca gcgctcccca tccggcgccg
     4141 acagcggaac gatgtgcggc cgcttgttct tggtgcgctc tggcggcaac gcgatcgcat
     4201 caatagtgaa ggccggcagt tcgatgccgt tgatgcgcgc tttcggcact tcggtcttgc
     4261 cgatctccga tcgccgcaag cccgccattt cctcggcgcg ttggccgctc aacatcaaga
     4321 gcttgacgat cgagccgtag tgatcattac cagccgactc ccaaacctcc cgtagctcgg
     4381 catccgtcag ggtacgctcg cgtgacttct cctcgaacct gcgggtgttg gcgacggggt
     4441 tctcagtgac gatgccctcc tccatcgccc atccgtagaa tgcgagcaga gatgacctcg
     4501 cccggttggc ctgcacgtcg ccggatgtgt ccctgatttc actgatttgg gtcgcaatgg
     4561 tgcgttgggt gatgccggca agctgtagcc catgaagccg cttgcaatat tttagcaaat
     4621 gccgatcgat ctgatcgtaa gcgcgaggcc gcatttcccg ctttcgaagc gccagatagc
     4681 tttttgcgac cgcctcgaac atctcagacg cctgccgttt gcgttgctcc ttttccccgg
     4741 ccggatcatg tccgagcttc accttggcgt agagttcgat cgcggtctcg cgggccttga
     4801 ccagcgttat tgccgccgcc gaaccgagtg acatgcgccg ctgcttcttc ccaagcgcgt
     4861 actggaacac ccaattgcga ctaccgcctt cacgcagccg caggccgaaa ccgggcacat
     4921 catcatccca cgcgatttga tcggtcttgc cctgtggcag gcgtagattg tcgatcgact
     4981 gggtggtgaa tttcatggga gcgcccaagg ctgggaatac tatgggaagt tcgcagcagc
     5041 acatcggcgc cgcctcatca tacctatgac tggcgatctt cctgatttat catatacttg
     5101 caacacgttg agcatatttg tgcttagcta gaggtcgcgc tttcgggtcc cgtcgctccc
     5161 gccgctcgtg cctttccgag tacttccgaa ccaggtggat gcggacttcg gatccgcgtc
     5221 gccatcgttc gcatatatgt ccgaaatgtg actactgccg gattcacttc gcaaaaaata
     5281 tggcggtacg cgcctttctc gttgaaattg tataaaaaaa tatttcccgc ggacgccgtt
     5341 aaatgaccaa gatctactca gaattgtgtc acattccgat tgatatttgg ccgcctacgt
     5401 cgatggggag tggatgatgc ccgtatccag cgccactatt aagactcttt ctgccatatt
     5461 ctgcctgtcc ctggtcatgc cgttacagct ggcccgcgct caaagcccgg tgaagcagca
     5521 ggtcctcagt tacgaggaaa agaagcgtca ggccaatgac atcgcggtca ccattgtggt
     5581 gtcgggactc tcgtgcacct gtgcgcggtt tgctgaagac atcaagaac
//
LOCUS       DATILV010000043         9656 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1800321, whole genome shotgun sequence.
ACCESSION   DATILV010000043 DATILV010000000
VERSION     DATILV010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9656)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9656)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9656
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1800321"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(107..1021)
                     /locus_tag="VLJ17_00900"
     CDS             complement(107..1021)
                     /locus_tag="VLJ17_00900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014890126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV21565.1"
                     /translation="MTYVIDVHDLRKSFGAMKVVDGLSLQVSKGEICGFLGANGSGKT
                     TTIRMLCGLLTADSGYGTCLGFDIIRQASFIRRHVGYMTQKFSFYDDLTVFENLDLVA
                     RVYEMPRPREAVRRIMDRMGLADRSDQLAAQLSGGWKQRLALAACILHEPQLLLLDEP
                     TAGVDAKARREFWDLIHDMAGDGLTVLVSTHYMDEAERCNRIVYLANGRIVVQGGADE
                     VSHASGLITFEATGADVDAAARSLRRVPGVEAAAVFGRALHVAGTDRSALESAIRDAD
                     YDALSWHEVEPRLEDVFIHMLSQKGGES"
     gene            complement(1018..2025)
                     /locus_tag="VLJ17_00905"
     CDS             complement(1018..2025)
                     /locus_tag="VLJ17_00905"
                     /inference="COORDINATES: protein motif:HMM:NF024829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HSV21566.1"
                     /translation="MYGRFIALAAIVLLAAAGAGWWWTIRVVPPVEWQGYAEADFVKV
                     GPTQQGLLTSLYVARGSKVAVGAPLFDQDDTADRAARDQTERQLKQAEEQLANLRAGG
                     KPTEIQQAEASLADAKAARDKIEGDLRRNEILLKTFAATQQLVDQERADLRSAEAKVQ
                     GLNAALAQMRAPMGREGEIKAQQALIESLRAAVVMAQWRIDQRHVMAPAAGIVADVLA
                     RPGETIPAGGPVVSLLPPESIFVRFFVPETRLAEVHGGDKVALLCDRCPADLAATISF
                     ISPQAEFTPPVIYSEASRAKLVYMVEARPPREQATLINPGQPMAVRPLAPSPIARNGP
                     R"
     gene            2101..2751
                     /locus_tag="VLJ17_00910"
     CDS             2101..2751
                     /locus_tag="VLJ17_00910"
                     /inference="COORDINATES: protein motif:HMM:NF025605.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HSV21567.1"
                     /translation="MSDAPLEHGEFKRGPGGRPTRAEAERRHRSLLATAFKLFLEKGW
                     DGVSVEEISRQSGVAKGFIYARYADKGALFVEAIERLMVDAMGTLHLAGPMPDDVEQG
                     LYAFGRKMLDLVLQPEALAFHRQFIAEAGRFPELAKLFLARNRVRDLIIEVLQTYADR
                     GAIEIGDPKLTAEHFAILVVGIPRIMALLVGREPAAEEECRLRAAVRLFLKGCRAD"
     gene            2920..3387
                     /locus_tag="VLJ17_00915"
     CDS             2920..3387
                     /locus_tag="VLJ17_00915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HSV21568.1"
                     /translation="MAVSLKVNGATYSVPAEPDTPLLYVLRNDLALNGAKFGCGLAQC
                     GACTVLVDGKPVRSCVTQIGSLGQSEVTTLEGLGMVDKPHPLQQAFIEEQAVQCGYCI
                     NGMIMSAKALLDQNPRPTEAQVRDGLAGNLCRCGTHGRIIRAVLKTSQANGRI"
     gene            3387..5612
                     /locus_tag="VLJ17_00920"
     CDS             3387..5612
                     /locus_tag="VLJ17_00920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSV21569.1"
                     /translation="MSAHISRRDFAASLGVGLGGIVVAFTLAPKLSLSQQPAALPGSL
                     NGNRMLDAWIRVAADGGVTVCTGKVELGQGIVTALAQIAAEELDLPLARLHMISGDTE
                     KTPNEGVTSGSQSIENGGVALRLAGAEVRAILVDLAAKRLGVEASGLAVADGVISAVD
                     GRKLTYGELARDVDLHREVTAKAKPKSPSVHRIVGKSIARFDIPAKVTGGTAYVQDLR
                     LPGMLHGRVVRPPNYGAKLESIDEAKIKAMPGVVAVVRDGSFLGVIAEREERAIRASE
                     ALRQSAKWTAGPPLPDQATFYDHLLSLPDDPHVISEKQAALPDGAKVIEATYRKPYMC
                     HGSIGPSCAVAQFADGKMTVWTHSQGVFPLRGNLAMALKLPADRIHCIHAEGSGCYGH
                     NGADDVALDAALLARGAPGGRPVRLQWMRGDEFAWEPFGPAMVMKAKAALGADGRIVD
                     WNYDVWTNTHSTRPDPGGNNLLASWYLNEPQKPAPPGILPQPAGGGDRNAVPLYDFPR
                     QRVVHHFIKQMPLRVSALRTLGAYANVFAMESFLDELALAAGTDPVAFRLAHLKDPRA
                     RAVIEAVAKKASWKPGEKAGGGKGRGIGFAKYKNLATYVAVIADVEVDAANGKVSVPR
                     VWAAADSGLIINPDGLANQIEGGIIQSTSWTLHEEVKFDRNGIKSRDWLTYPILTVPE
                     APKVEVELINRPDERPLGSGEGSQGPAVAAIANAFAAATGKRMRELPLSPDRVRAVLQ
                     G"
     gene            5721..6599
                     /locus_tag="VLJ17_00925"
     CDS             5721..6599
                     /locus_tag="VLJ17_00925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21570.1"
                     /translation="MGIASVLRLSPEAKIRLPNVDEALNIGYAIHSADDPALRNMIAQ
                     QNARIVVKKFLSVETEAGSAEEAYLNCVRAIVHSQARGIARRKGQYIQDLKAAQMRRR
                     QQRSRIRQSRRSNDWLNSAWRLLGPLILGLTGYLLAHIIAVFVPEEVATQTGSRIPAI
                     LMGLVFVAIGRSIGFYMNEMQRNKIESEYNSRCYLAFLTYEIGKLKEFRQYRKQLCEA
                     WLQYTGEQYPITASYQMVMESDIETRRQLERHLQVYDTGYIRLIMRMVRILRGKRKHD
                     AEKLPPLPSELAAEKE"
     gene            complement(6615..7271)
                     /locus_tag="VLJ17_00930"
     CDS             complement(6615..7271)
                     /locus_tag="VLJ17_00930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018391127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV21571.1"
                     /translation="MTSVLIIDDHPIVLQGCRRVLEDAGLEPVLTAGDLLTGYRLYRR
                     HTPDVVIVDLAIQGKGLGGLDLIRRIRAHNARAHILVLSMHNDAMIVARSLEAGASGY
                     VLKDTSSEDLIKAVQQTATGAPYLDGELAMKMALAGSAGRGNPLSDLTPRELQVLALL
                     ADGKPYDRIANELNVSYKTVVNVSSQLKQKLQARNLPELVSTAVKLLAPQSWGGVDKA
                     "
     gene            complement(7268..8890)
                     /locus_tag="VLJ17_00935"
     CDS             complement(7268..8890)
                     /locus_tag="VLJ17_00935"
                     /inference="COORDINATES: protein motif:HMM:NF019350.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV21572.1"
                     /translation="MPWRLRALNALWFGRSVRTQILIVFIAINLVAASVAGSVIIYQA
                     GASTRIEIAASMRLAELMVSEAVQLIQQGTPAEQFLKTLPGQLRFIRHVRVGIRDAVG
                     QPVSEQAPERIELSREDNRVAAPAWFAMMIGPPIERHKVPVVVSGQTIGTVEIVSEPR
                     DEIAEVWANSIALAAVAAMTVLVSVGILYWVLGRVLDPLTALGTGLLGLERRDYKVRL
                     ARPKVLEFAAIVDRFNALARALDDVRTENLALNRRLITAQDDERRRTALELHDEVGPS
                     LFGLKANVASIAKAAIALPEAAAHTVAERVRDLTAIIDHLQSINRNILNRLRPMALGH
                     VPLREIIAELVRDRAREHRHIVFTHDVETLEHSYDDTVDLTLYRCIQESLTNAIRHAS
                     AKSIDVRVAVRCCVSSPSPRVGEGWGGEAGGDGTHAPGGLTPRPSPQRGGTGFAAPLS
                     LNIAPVGLPQAERGEGAQLELTVHDDGVGIAAGQAQGFGLRGMQERVQALGGEFAIET
                     GGGRGTCVRIVIPLPARPGGSAQPVDYANSSP"
     gene            9154..>9656
                     /locus_tag="VLJ17_00940"
     CDS             9154..>9656
                     /locus_tag="VLJ17_00940"
                     /inference="COORDINATES: protein motif:HMM:NF021778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-propeller fold lactonase family protein"
                     /protein_id="HSV21573.1"
                     /translation="MFNRRTVSAMFAGTVVAPSFALAGHNKQESAFYSGVGNELTHYE
                     VDVAKAELAKRGSVKMPGGIQYAWPHPSKKYLYVTSSTGGPGFNPGSGFPVDQHHLAA
                     FRIGPTGELTQHGDVVKLKWRPIHSSVDIAGEYVLVAYNFPAGLSVHQIKRDGTIGEE
                     VSQPDNL"
BASE COUNT         1830 a         2974 c         3116 g         1736 t
ORIGIN      
        1 agctgcatga ttggcaccgc gatgatgaag cgcaaggtga gcgcatcgcg catgacctgg
       61 gtccattcct tgcgcagcag ggcgtacagc cgcttgaagg agagcgtcat gattctcctc
      121 ctttctggct cagcatgtgg atgaaaacgt cttccaagcg cggctcgact tcgtgccacg
      181 atagcgcgtc gtagtcggcg tcgcgaatgg cgctttcaag cgcgctgcga tccgtcccgg
      241 cgacatggag tgcgcgtccg aacacggcgg cggcctcgac gccgggcacg cggcgcaggc
      301 tgcgcgcggc ggcatcaaca tctgctccgg tcgcctcgaa ggtaattagc cccgaggcgt
      361 gggagacttc gtcggcgccg ccctgcacca cgattcggcc gttggccaga tagacaatac
      421 ggttgcaacg ctcggcctcg tccatgtagt gagtcgagac caggaccgtg aggccgtcgc
      481 ccgccatatc gtggatgagg tcccaaaact cgcggcgtgc cttggcatcc acaccggcag
      541 tcggttcgtc tagcaacagc agctgcggct cgtgtaggat gcaggccgcg agtgcgagcc
      601 gctgcttcca gccaccggag agctgcgcgg caagctggtc actgcgatca gcaagcccca
      661 tgcggtccat gatgcggcgc accgcctcgc gcgggcgggg catttcgtag acgcgggcta
      721 cgagatcgag attctcgaac accgtgagat cgtcgtagaa gctgaacttc tgcgtcatgt
      781 agccgacatg gcggcggata aacgatgcct gccggatgat gtcgaagccg aggcaggtgc
      841 cgtacccgct gtcggcggtg aggaggccgc acagcatgcg aatggtggtg gttttgccgc
      901 tgccgttggc gccgagaaac ccgcagattt cccctttgct gacttgcagg ctgagaccgt
      961 cgacgacttt catggcgccg aagctctttc tcaggtcgtg gacgtcgatg acgtaggtca
     1021 tcgcgggcca ttccgcgcga tcggggacgg cgcgagcggt cgtactgcca tcggttggcc
     1081 cggattgatc agcgtagcct gctcgcgcgg cgggcgcgct tccaccatgt agacgagctt
     1141 ggcgcggctc gcctcgctgt aaatcaccgg cggcgtgaat tccgcttgtg gcgagatgaa
     1201 ggagatcgtg gcggcgagat cggccgggca gcggtcgcac aatagcgcga ccttgtcgcc
     1261 gccatggacc tcggcgagcc gcgtttcggg gacgaagaag cgtacgaaaa tgctttccgg
     1321 cggcagcaac gacacgacag ggccgccagc cgggatggtt tcaccggggc gggcaagaac
     1381 gtcggcgaca atgccggccg ccggcgccat gacgtggcgc tgatcaatcc tccactgcgc
     1441 catgacgact gcagcgcgca acgattcgat cagcgcttgt tgcgccttga tctcgccctc
     1501 tcgtcccatg ggggcgcgca tttgcgcgag cgcagcattt agaccctgga ccttcgcttc
     1561 ggcggagcgc agatcggcgc gctcctggtc gacgagctgt tgagttgcag cgaaagtctt
     1621 caacagaatt tcgttacgcc gcagatcccc ctcgatcttg tcgcgcgccg ctttggcgtc
     1681 ggcgaggctc gcctcggcct gctggatttc ggtcggcttg ccaccagctc gaagattggc
     1741 gagttgctcc tcagcctgct tgagttggcg ctccgtttgg tcacgggcgg cccggtcggc
     1801 ggtgtcgtcc tggtcgaaca gcggcgcccc gaccgcgacc ttggagccgc gggccacgta
     1861 cagcgatgtg aggagaccct gctgggtcgg gcccactttg acgaaatcgg cctccgcgta
     1921 gccctgccat tccaccggcg ggacaacgcg tatggtccac caccagccgg caccggccgc
     1981 ggcaagaaga acaatcgctg cgagggcgat aaagcgtccg tacacgggac ttgacctttt
     2041 gtaaccgaac ggtatcgttg cattaccatt attggtggat cgcagcaagg aacgggacgc
     2101 atgtccgatg cgccgttgga acatggcgag ttcaaacgag gccccggcgg ccggccgacc
     2161 cgtgcggagg cggagcgacg gcaccgcagc ctgctggcga ccgcgtttaa attgttcctg
     2221 gaaaaaggct gggacggcgt ctcagtcgaa gagatctccc gtcaatccgg cgtcgccaag
     2281 ggcttcatct acgcgcgtta cgccgacaag ggcgcattgt tcgtggaagc gatcgagcgc
     2341 ctgatggtcg atgccatggg gacattgcat ctggcggggc cgatgcccga tgatgtggag
     2401 cagggacttt atgcgtttgg ccgcaagatg ttggacctcg ttctgcagcc cgaggcgctg
     2461 gcattccacc ggcaattcat tgccgaagct ggtcgctttc cggagctcgc caaattattc
     2521 ctggcgcgca atcgggtgcg cgatctgatc atcgaagtgc tgcagaccta tgcggaccgc
     2581 ggtgcgattg aaatcggcga tcccaagttg accgcggaac atttcgccat cctggtggtt
     2641 ggcattcccc gtataatggc gctcctagtc ggtcgtgagc cggccgccga ggaggaatgc
     2701 cggctgcgcg cggccgtgcg gctattcctg aagggttgcc gtgccgattg atctctgctc
     2761 gctccccctc cgcaagggag aggagagaag aacggcgccg cgccaaatac cactgcccca
     2821 tcgcaggggc tcgacgccgc cgcgattgcg cggctaaatg gtcagaccaa attcgggacg
     2881 cgaaaagccc gggaagaccg ggccatcaag gagagcccca tggcggttag cctcaaggtg
     2941 aatggtgcga cgtacagcgt gccggcggaa ccggacacgc cgttgcttta tgtgctgcgc
     3001 aacgatctcg cacttaacgg tgccaagttc ggctgcgggc ttgcccaatg cggcgcctgc
     3061 acggtgttgg tggacggcaa gccggtgcgc tcctgcgtca cccagatcgg ctcgctcggg
     3121 caatccgagg tgaccaccct ggaagggctc ggtatggtgg acaaaccgca tccgctgcag
     3181 caggccttca tagaagagca ggccgtccaa tgcggctact gcatcaacgg catgatcatg
     3241 tcggcgaagg cgctgctcga tcagaatccg cgccccacgg aggcgcaggt gcgcgacggc
     3301 cttgccggca atctgtgccg ttgcggcacc catggccgca tcatccgcgc cgtgctcaag
     3361 accagccaag cgaacgggag gatctgatga gcgcgcacat ctcgcgacgg gattttgcag
     3421 ccagtcttgg tgtaggtctt ggcggcatcg tggttgcctt cacgctcgct ccgaagcttt
     3481 ccctctccca gcaaccggcc gcgctgccgg gtagcctcaa cggcaaccgc atgctcgatg
     3541 cctggatccg cgttgcggcc gacggcggcg tcacagtgtg cactggcaaa gtggaactcg
     3601 gccagggcat cgtgacggcg ctcgcgcaga tcgccgcgga ggaactcgac ctgccgctgg
     3661 cacgcttgca catgatctcc ggagacaccg agaaaacccc aaacgagggc gtcacgtccg
     3721 gcagccaatc gatcgaaaac ggcggcgtgg cgctgcgtct tgcgggcgcc gaggtgcgag
     3781 cgatcctcgt cgatctcgcg gcgaagcgcc ttggcgtcga ggcttcgggg ctcgcggtcg
     3841 cagatggcgt catcagtgcg gtcgacgggc gcaagctgac ttacggcgag ctcgcgcgcg
     3901 acgtcgacct gcatcgtgag gtcaccgcaa aggcaaaacc caaatcgcca tcggtccacc
     3961 ggatcgtcgg caaatcgatc gcgcgcttcg acatacccgc aaaggtcacc ggcggcaccg
     4021 cctatgttca agacttgcgg ctacccggca tgctgcatgg ccgcgtcgtg cgtccgccga
     4081 actacggcgc aaaactcgag tcaatcgatg aagccaagat caaggcgatg cccggcgtcg
     4141 tcgcggtggt gcgcgacggc agcttcctgg gggtcatcgc agagcgcgag gaacgggcta
     4201 ttcgggcgag cgaggcactg cgtcaaagcg ccaagtggac ggcagggccg ccgctgcccg
     4261 atcaggcgac attttacgat cacctgctat cgttgcccga cgatccccat gtgatcagcg
     4321 agaagcaggc ggcgctgccg gatggcgcca aggtgatcga ggcgacctat cgcaagcctt
     4381 acatgtgcca cggctcgatc gggccgtcct gcgccgttgc ccaattcgcc gacggcaaga
     4441 tgacggtgtg gacccatagc cagggcgtgt ttccgctgcg cggcaacctt gccatggcac
     4501 tgaagctgcc ggcagacaga atccactgca tccatgccga gggttcgggc tgctacggcc
     4561 acaacggcgc cgatgacgtg gcgctcgatg ccgcgctgct ggcgcgaggg gcgcccggcg
     4621 gccggccggt gcggctgcaa tggatgcggg gcgacgagtt cgcctgggag ccgttcggcc
     4681 ccgccatggt gatgaaggcc aaggccgcgc tgggtgcgga cggccgcatc gtcgactgga
     4741 attacgacgt gtggaccaac acccattcga cgcggccgga ccccggcggc aacaatctcc
     4801 tggcaagctg gtatctcaac gagccgcaga aaccggcgcc gccgggaatt ctaccgcaac
     4861 cggccggcgg cggcgaccgc aacgcggtgc cgctctacga cttcccgcgc cagcgagtgg
     4921 tgcatcattt catcaagcag atgccgctgc gcgtatccgc gctacgcacc ctcggcgctt
     4981 acgcgaacgt gttcgcgatg gagtccttct tggatgaact ggcgctcgcc gccgggaccg
     5041 acccggtggc gttccgcctc gcccatctca aggacccgcg cgcgcgggcc gttattgaag
     5101 cggtcgccaa gaaggccagc tggaaaccag gagaaaaggc cggcggcggc aagggccgtg
     5161 gtatcggctt tgcgaaatac aaaaacctcg ccacttatgt ggcggtgatc gccgatgtcg
     5221 aagtcgatgc tgccaacggc aaggtctctg tgccgcgcgt ctgggcagcc gccgattccg
     5281 gcctcatcat caacccggac ggccttgcca atcagatcga aggcggcatc atccaatcga
     5341 ccagctggac gctgcacgag gaggtaaagt tcgatcgtaa cggcatcaag tcgcgcgatt
     5401 ggctcaccta tccgatcctc accgtgccgg aagcgcccaa ggtcgaggtc gagctcatca
     5461 accgccccga cgagcgcccg cttggctccg gcgaggggtc gcaggggccg gcggtggcgg
     5521 ctatcgccaa cgcatttgcg gcggcgacgg ggaagcggat gcgggaactg ccgttgtcgc
     5581 cggaccgggt gagggcggtg ttgcaggggt aggggtgagt gcggcttaac gcggattggc
     5641 gtaatccgcc gcgccggtca ggtcatgatg gctaaagcga tcccgcctcg cgggctgcct
     5701 gcttcgccaa agggaagatc atgggcatcg cgtcggttct gcggctgtcg ccggaagcga
     5761 aaatcaggct tccgaatgtc gatgaggcgc tcaatatcgg ctatgccatt cattcggccg
     5821 acgatccggc gctcaggaac atgatcgccc agcagaacgc ccggatcgtg gtcaagaaat
     5881 tcctgtccgt tgaaaccgag gcaggatcgg ctgaggaagc ctatctcaac tgcgtgcggg
     5941 caatcgtgca ttcgcaagcg cgcggcatcg cgcgccgcaa gggacaatac atccaggacc
     6001 tgaaggccgc gcagatgcgg cggcgccagc agcgcagccg cattcgccaa tcacggcgca
     6061 gcaatgactg gctcaacagc gcctggcggc tgttggggcc attgatcctt ggcctgaccg
     6121 gatatctgtt ggcgcacatc atcgcggtgt tcgtgccgga ggaagtcgcg acccaaaccg
     6181 gaagtcggat acccgcgatc ctcatgggcc tggtgttcgt ggcgatcggc cgctcgatcg
     6241 gcttctacat gaacgagatg cagcgcaaca agatcgagtc cgagtacaat tcccgctgct
     6301 atttggcgtt tctcacctac gagatcggca agctcaagga gtttcgccag tatcgcaaac
     6361 aattgtgcga agcctggctg cagtataccg gcgagcagta tccgatcacc gcgtcctatc
     6421 agatggtaat ggagagcgac atcgagacgc gccgccagct agagcggcac ttgcaggtct
     6481 acgatactgg ctacatccgt ttgatcatgc gaatggtgcg catcctgcgc ggcaaacgga
     6541 aacacgacgc ggaaaagctc cccccgcttc cgagcgagct ggcggcggaa aaggaataag
     6601 catgcggatt gggatcacgc tttgtcgacg ccgccccaag actgcggcgc caggagcttt
     6661 acggcggtgc tgaccagctc aggaagattg cgcgcctgga gcttctgctt gagctgggag
     6721 ctgacgttga cgaccgtctt gtaacttaca ttgagttcgt ttgcgatgcg gtcataaggc
     6781 ttgccgtcgg caagcaacgc caacacttgc aattcgcgtg gcgtcagatc ggagagcggg
     6841 ttgcctcgcc cggcggagcc ggccagcgcc atcttcatgg caagctcgcc gtcaaggtag
     6901 ggtgccccgg tcgcggtctg ttgcacggcc ttgatcagat cctccgagga ggtgtccttg
     6961 agcacatagc cggatgcccc tgcctccagc gagcgcgcta cgatcatggc gtcattgtgc
     7021 atactgagca ccagtatgtg ggcgcgcgcg ttatgggcgc ggatgcggcg gatgagatcg
     7081 aggccgccga ggcccttgcc ctggatggca aggtcgacaa tgacgacatc gggggtatga
     7141 cgtcgataga gccgatagcc ggtgaggaga tcacctgccg tcagcaccgg ttccagcccg
     7201 gcatcttcga gcacacgacg gcatccctgc aatacgatag gatgatcatc gatgatgaga
     7261 actgaggtca tggggaactg ttagcatagt cgaccggctg cgccgagcca cccggccgtg
     7321 ccggcagcgg gataacgata cgaacgcagg tgccgcgccc gccccccgtt tcgatcgcaa
     7381 attcgccgcc aagcgcctgg acacgttcct gcatgcctcg caacccgaaa ccttgcgctt
     7441 gaccggcggc gatgccgacg ccgtcatcgt gtacggtgag ttctagctga gcgccttcac
     7501 ctcgctccgc ttgcgggagc cccacaggcg ctatgttaag cgacaacgga gcagcgaacc
     7561 ccgtccctcc cctttggggg gagggacggg gagtcaagcc gccgggcgcg tgcgtgccat
     7621 cacctcccgc ctccccaccc caaccctccc ccacacgagg ggagggggag gagacacagc
     7681 atcggaccgc caccctcacg tcgatggact tggcgctggc atgtcggatc gcattggtca
     7741 ggctttcttg aatacagcgg tagagcgtca gatccaccgt atcgtcgtag ctgtgctcga
     7801 gcgtctcgac atcgtgggtg aaaacgatat gccggtgttc tcgggcacga tcgcgcacaa
     7861 gttctgcgat aatttcccgc agcggcacat ggccaagggc catcggccgc aaccgattga
     7921 ggatgttgcg gttgatgctc tgcagatgat ctatgatcgc ggtgagatcg cgaacacgct
     7981 ccgccacagt gtgcgcggca gcctccggca aagcaatcgc tgccttcgca atcgaagcca
     8041 cattggcctt gaggccgaac aagcttggtc cgacttcgtc atgcagctcc agtgcggtgc
     8101 gtcgtcgctc gtcatcctgc gcggtgatca ggcgtcgatt gagcgcaagg ttctcggtgc
     8161 ggacgtcgtc gagcgcacgc gcgagcgcat tgaagcgatc gacgatggcg gcgaattcca
     8221 acaccttcgg gcgggccaac cgcaccttat agtcgcgccg ctccagaccc aacaacccag
     8281 taccgagagc ggtgagcgga tcgagcacgc ggccgagcac ccagtagagt atgccgacgg
     8341 agaccagcac ggtcatggcg gcgacggccg ccagcgcaat gctgtttgcc cagacctcgg
     8401 cgatctcgtc acgcggctcg ctgacgatct ccacggtgcc gatcgtctga ccgctgacga
     8461 ccaccggtac tttgtgtcgc tcgatcggcg gaccgatcat catggcgaac catgccgggg
     8521 cggcgacccg attgtcctcc cgcgatagct caattcgttc cggggcttgc tcggaaaccg
     8581 gttgcccaac cgcatctcgt atcccgacac gcacgtggcg gataaatcgc aactgacccg
     8641 gcaaggtttt caagaactgc tctgccgggg tgccctgttg gatgagctgg accgcttcgc
     8701 tgaccatcag ttcggcaaga cgcatggatg cggcgatctc gatgcgagtc gaggcaccag
     8761 cctggtagat gatgacgctg ccggcgaccg acgcggcgac cagattgatc gcgataaaga
     8821 cgatgagaat ctgagttcgc accgagcggc cgaaccacag ggcattcagt gcgcgaagac
     8881 gccagggcac taatgatcct tggttttttt gcacatctgc gcgaatggat atagctcccg
     8941 gcaaattctc aaacattgtc cactgcgggg cgggttcgct ctaatccgcc atatcgactg
     9001 taaatggcga ggttaaaggg aagctacact gctttcgtgg aatcaatcta ccacatgctc
     9061 cgggcttcac tcctcggttg cggatctgca cgtctcggcc caagatatgc gcaacgctac
     9121 ctacaacaag cgtgaattga gagagggctt acgatgttca accgtcgcac ggtgtcggcc
     9181 atgtttgcgg gtacggtggt ggcgccaagt ttcgctcttg ccgggcacaa taagcaagaa
     9241 tccgccttct actcaggggt cggaaacgag ttgacccatt acgaggtaga tgtcgctaag
     9301 gccgagcttg ccaagcgcgg ttcggtcaaa atgccgggcg gtatccaata tgcttggccg
     9361 catccgtcga aaaagtatct ctacgtcaca tcgagtaccg gcggacccgg gttcaatccc
     9421 gggtcaggct tcccggtcga tcagcaccat ctggcggcgt ttcggatcgg gcccaccggt
     9481 gagctgacgc agcacggcga tgtggtcaag ctgaaatggc ggccgatcca ttccagtgtc
     9541 gacatcgccg gcgaatatgt gctggtcgct tataactttc cggctggcct cagcgtgcac
     9601 cagatcaagc gcgatggaac gatcggcgag gaggtgagcc agccggacaa tttgga
//
LOCUS       DATILV010000044         5281 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4611651, whole genome shotgun sequence.
ACCESSION   DATILV010000044 DATILV010000000
VERSION     DATILV010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5281)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5281)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5281
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4611651"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..528)
                     /locus_tag="VLJ17_00945"
     CDS             complement(<1..528)
                     /locus_tag="VLJ17_00945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonopyruvate decarboxylase"
                     /protein_id="HSV21574.1"
                     /translation="MDDTSKTALHWPDAIYAQFRRVGIRQVGYVPDAGHSRLIELCVK
                     DPDIYDVVLTTEEEGVGLVAGAALGGQRAALLMQSSGVGNCINMFSLLKNCGFPCLIL
                     VTMRGEFAEFNPWQVPMGSITEASLKLCGFLTYRVEEPDDVDDVVSGGCDMAFNGNLP
                     VAVLLSQRLIGRKVWN"
     gene            complement(566..2047)
                     /locus_tag="VLJ17_00950"
     CDS             complement(566..2047)
                     /locus_tag="VLJ17_00950"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSV21575.1"
                     /translation="MDARSNYTPGIAYDDLREWLTLAEQLGEIRTVRGANWQEDIGLA
                     AEAVLRAENGPCVVFEDVPGCPKGFRLLLNVFAGRRRNMTFGFPDHLTKWELSEACRD
                     AYLKDMRVVPHEMVDTGPVLENIMMGDDIDVLKFPSPVWHERDGGRFIGTGTYSITRD
                     PEENWLNAGAYRAQVFDKKSVGVLMATGHHGYLHREKYWKRGEPLPLVMVLGGDPLAF
                     FYGGTEAPYGVFEIDIIGGWRGRPVRMVVGKITGLPFPADAEIVLEGYVTPERREVEG
                     PFGEWTGHYAGGAAPRPVLDIKAIYHRNDPILLGVPPMGAGPDEMARYRAVLRSAMVK
                     QNMTNAGVPEVQQVWCHEVGGSRLLHGVSIKQKYPGHAVQAGQIAAQCGAAAYASKYI
                     VVTDEDVDVTNLDHLIWAMLTRTDPKESIQFIEGSWDSPADPRLSPDKRAAGDMTHSV
                     AVINACKPYHWRDKFPPSNAPSAEVARRAKEKFGWLLDGERRS"
     gene            complement(2054..3115)
                     /locus_tag="VLJ17_00955"
     CDS             complement(2054..3115)
                     /locus_tag="VLJ17_00955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003531343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HSV21576.1"
                     /translation="MKIAVLPGDDIGPEITDATLSVLEAADRRFDLDLSFDVVEVGMA
                     AHRSTGTTLPPATIEAAHNADGIILGPCSVASYPPASDGGINVSGTIRRIFDLYANMR
                     PARSRPPLPRAVPGLDCLIVRENTEGFYADRALFRGPGEFMPTPDCALSFRKITAQAS
                     RRIAKVAFEAAQHRRGCITVVGKRHVLQATDGLFFNEVRNESVLHPNVIWREMDVDAM
                     AADLYTRPRDHDVILTTNMFGDILSNEALALSGSLGLAQSLNMGECHAAANAGHGSAP
                     DIAGHGTANPAGLMLSAAMLLRWLGERHQLREFGHAAASIEAAADAAMLNSASRTADL
                     GGSGKTRAFTNAVIRSLRD"
     gene            complement(3239..4270)
                     /locus_tag="VLJ17_00960"
     CDS             complement(3239..4270)
                     /locus_tag="VLJ17_00960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21577.1"
                     /translation="MTLGKLARSTMAAAAFFPVSSVQAQNPADFYKGKNVELYIGYSV
                     GGGYDLYARVLARHIGRHIPGNPTLVAKNMEGAGSLRLANWLYRVAPKDGSVFATIGR
                     GTGFDPLLGQQTAQFDGTKFTWIGSGNHEVSVCVAFEGRAGITKFEDLRTKEMTVGGT
                     GASADTDQFPKVVNGVLGTKMKIVSGYPGGNDVVLAMERGELQGRCGWSWSSVKATHG
                     SWIAEKKLNVLVQLSLQKHRDLPDIPLVTDFAKTDEELQILKLIFARQVMGRPFLAPP
                     GIPAERAEALRTAFMATMTDPAFTADAERSQLEVNPVAGDDLQKLVAEIYRTPAEVAK
                     KAAELLAVK"
     gene            4545..>5281
                     /locus_tag="VLJ17_00965"
     CDS             4545..>5281
                     /locus_tag="VLJ17_00965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007759285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HSV21578.1"
                     /translation="MAWHALALLLEPARLGILLIGVIIGLAIGVLPGLNGIVGMAMLI
                     PFTYNMDQHTAMALLLGMAAVITSSDFISAVLFGVPGHVGAAATVIDGHAMARNGEAG
                     RAFGAGFAASLAGGLIGAVVLALSIPILRPVLLAIGSPELLAFTLFGLSMVATLSGRA
                     PLKGLTVAGLGLMISMIGSRSESGTLRWTFDTLYLYDGVPLVPAMLGLFAMPELCELA
                     VARRKIAGEHASDINLSNQWLGVRDVGR"
BASE COUNT          942 a         1654 c         1650 g         1035 t
ORIGIN      
        1 gttccacacc ttgcggccga tcagccgttg cgacaacagg acggcgaccg gcaggttgcc
       61 gttgaacgcc atgtcgcaac cgccgctcac gacgtcgtcg acatcgtccg gctcctccac
      121 ccgataggtt aggaatccgc agagtttcag gctcgcttcg gtgatcgagc ccatcggcac
      181 ttgccacgga ttgaactcag cgaattcgcc ccgcatggtc acgaggatca ggcacggaaa
      241 gccgcagttc ttcaacagcg aaaacatatt gatgcagttg ccgacgccgc tgctttgcat
      301 cagcagcgca gcgcgctggc cgccgagtgc ggcgccggcc accaagccga cgccttcctc
      361 ttcggtcgtc agcaccacgt cgtagatgtc tgggtccttg acgcacagct cgatcaagcg
      421 actgtgcccg gcatccggca catagccgac ctggcggatg ccaacccggc ggaactgcgc
      481 atagatcgcg tcgggccagt gcaatgcggt tttcgaggtg tcgtccaagg ctggctccgg
      541 tcaggggcat gggcggagaa tcatctcaac tccgcctctc gccatcaagc agccagccga
      601 atttttcctt ggcgcgccgg gcgacctctg cgcttggcgc attgctgggt gggaatttat
      661 cgcgccagtg ataaggcttg caggcgttga tgacggcaac cgaatgggtc atgtcgccgg
      721 cagcgcgctt gtccggcgac aggcgcggat cggcaggcga atcccacgat ccctcgatga
      781 actggatcga ttcctttggg tcggtccggg tcagcatagc ccagatcagg tgatcaaggt
      841 tggtgacgtc cacgtcctcg tcggtcacga cgatgtattt cgacgcatag gcagcggcgc
      901 cgcactgtgc cgcgatctgg cccgcctgca ccgcatgccc gggatatttc tgcttgatcg
      961 aaacgccatg caacaggcgg gaaccgccga cctcatggca ccacacctgc tgcacctcgg
     1021 gcaccccggc gtttgtcatg ttctgcttga ccatggcgga gcgcaacact gcccggtagc
     1081 gcgccatctc gtcgggtccg gcgcccatgg gcggcacgcc gagcaggatt ggatcgttgc
     1141 ggtggtagat cgccttgatg tcgagcaccg ggcggggcgc ggcgccgccc gcatagtggc
     1201 cggtccattc gccgaacggc ccttcgactt cgcggcgctc tggcgtcacg tagccctcca
     1261 gcacgatttc ggcgtcggcc ggaaacggca ggccggtgat cttgcccacg accatccgga
     1321 ccggacggcc acgccacccg ccgatgatat cgatctcgaa cacaccgtag ggcgcctcag
     1381 tgccaccgta aaaaaacgcg agcgggtcgc cgcccagcac catgacaagc ggcaaaggct
     1441 cgccgcgttt ccagtatttc tcgcggtgca gatagccgtg atggccggtt gccatcagca
     1501 cgccaaccga tttcttgtcg aacacctgcg cgcggtaggc gccggcattg agccagtttt
     1561 cctccgggtc gcgggtgatg ctgtaggtcc cggtgccgat gaagcggccc ccgtcgcgtt
     1621 cgtgccaaac cggcgacggg aatttaagca cgtcgatatc gtcacccatc atgatgttct
     1681 cgagcaccgg gccggtgtcg accatctcat ggggaacgac gcgcatgtcc ttgagatagg
     1741 cgtcgcgaca cgcctcgctg agttcccatt tggtgagatg gtccgggaat ccgaaggtca
     1801 tgttgcgccg cctgccggcg aacacgttca acagcaggcg aaatccctta gggcaacccg
     1861 gaacgtcctc gaacaccacg caggggccgt tttcggcacg cagcacggct tcggccgcaa
     1921 gcccgatgtc ctcctgccag ttggcgccac ggacggtacg gatctcgcca agctgctcag
     1981 cgagtgtgag ccattcccgc agatcgtcat acgcaatgcc aggggtgtaa ttgctacgcg
     2041 cgtccatggg acctcaatcc cttagcgacc ggatcaccgc gttcgtgaac gccctggtct
     2101 tgccgctgcc gccgaggtca gcggtgcggc ttgccgaatt gagcatcgcg gcgtcggcgg
     2161 cggcctcgat gcttgcggcg gcgtggccaa attcacgcag ctgatggcgc tcgccgagcc
     2221 agcgcagcaa catggcggcc gaaagcatga gtccggcggg gttcgcggtg ccatgacctg
     2281 cgatatcggg cgccgaaccg tggcccgcgt tggcggcggc atgacattcg cccatgttca
     2341 gagattgcgc gaggccgagg cttcccgaca gcgccagcgc ctcgttggag agaatgtcgc
     2401 caaacatgtt ggtggtgagg atgacgtcat gatccctcgg ccgggtgtag agatcagccg
     2461 ccatggcatc cacatccatc tcgcgccaaa tcacgttcgg atggagcacg gattcattgc
     2521 gcacctcgtt gaagaagagg ccgtcggtcg cctgcaggac gtggcgcttg cccaccaccg
     2581 tgatgcaccc gcgccgatgc tgtgcagctt caaacgccac cttggcgatg cgccgtgacg
     2641 cctgggcggt gattttgcga aacgacagcg cgcaatcggg tgtcggcatg aactcgccgg
     2701 ggccgcggaa cagcgcgcga tcagcataga agccttcggt gttttcccgc acgatcagac
     2761 agtcgaggcc cgggaccgca cggggcagcg gcggccgcga tcgcgccgga cgcatattgg
     2821 catagagatc gaatattcgg cggatggtgc ccgaaacatt gatgccgccg tcgctcgccg
     2881 gcggataaga cgccacacta caggggccga ggataatgcc gtcggcattg tgggccgctt
     2941 cgatcgtagc cggtggcagc gtcgtgccag tgctgcggtg cgccgccatg ccgacttcga
     3001 ccacatcgaa actcagatca aggtcaaagc gccggtccgc ggcttccaac accgataagg
     3061 ttgcatccgt aatttccggg ccgatgtcat ctccggggag tactgcgatt ttcatccaag
     3121 gcattccgaa atcattgtgt cgcttaaagg aagttgagat tgctccgtga gcgcgggcgt
     3181 ttcgcccgtc tcttgtcgag ggtgggttgg gccgcgagac gcctgcgcag ccggaaactt
     3241 acttcaccgc cagcagctct gccgccttct tggccacctc cgccggcgta cggtagattt
     3301 ccgctaccag cttctgcaaa tcgtcgcccg cgaccgggtt aacctcaagc tgcgatcttt
     3361 ccgcatctgc cgtgaaggcc gggtccgtca tggtagccat gaacgcggtg cgcagcgcct
     3421 ctgcacgctc cgccgggatg ccaggtgggg caaggaatgg acgccccatg acctgacggg
     3481 cgaaaatcag cttcaggatc tgcagctcct cgtcggtctt ggcgaaatca gtgacgagcg
     3541 ggatgtcagg caggtcacga tgcttttgca acgatagttg taccaggacg ttgagcttct
     3601 tttctgcaat ccaggagccg tgggtcgcct tcacgctgga ccacgaccag ccgcagcggc
     3661 cttgcagctc gccacgctcc atagcgagca cgacgtcgtt gccgcccgga tagccgctga
     3721 cgattttcat tttggtgccg agcacgccgt tgaccacttt ggggaactgg tcggtgtcag
     3781 cgctggcgcc ggtgccaccg accgtcattt ccttggtgcg caaatcctcg aatttggtga
     3841 tgccggcgcg tccctcgaag gcgacacaga cgctgacctc gtgattgccg ctaccgatcc
     3901 aggtgaactt cgtgccgtcg aattgtgccg tctgctggcc gagcagcggg tcaaatccgg
     3961 taccgcgtcc gatggtggcg aacaccgagc cgtccttggg cgcgacacga tagagccagt
     4021 tggcgagccg caggctgccg gccccttcca tgttcttcgc caccaaggta gggttacccg
     4081 ggatgtgacg gccgatgtgc cgggcgagca cgcgggcata gagatcgtaa ccgccgccaa
     4141 cactgtagcc gatgtaaagc tcgacgttct tccccttata aaagtccgca ggattttgtg
     4201 cttgcactga ggagaccggg aaaaacgcag ccgccgccat cgttgagcgt gccaacttgc
     4261 caagcgtcat ttcgttttcc tccgcggcaa cactttcgtg ctgctttcgg tcgcagacaa
     4321 actagcagct ttgctgcctc ttgtcagaaa ggacccgggg aatcgcgacg acttgacgct
     4381 gtgcggactt tccgatgtaa acgtacaaag gacgcgcgat ccgcagcatt gatataagag
     4441 atgtaggatt ttcaggcctt aggcgcgtgc cttatttgac gggcaagggt gaggccctta
     4501 ccagacgggc gaggaacgct agaatgccgg ttgatatggc atcaatggct tggcatgccc
     4561 tggccctgct gctcgaaccg gcgcgtctcg gcattctatt gatcggggtg atcatcgggc
     4621 tcgcgatcgg cgtgttgccc ggccttaacg ggatcgtcgg catggcgatg ctgatccctt
     4681 tcacctacaa catggatcag cacaccgcga tggccctgct gctcggcatg gcagccgtca
     4741 tcacctcgtc ggatttcatc agtgccgttt tgttcggcgt cccgggtcat gtcggcgcag
     4801 ccgcgaccgt gattgatggg cacgccatgg cgcgtaatgg cgaggcgggg cgcgctttcg
     4861 gagcaggatt tgcagcttcc cttgccggcg gcctgatcgg cgctgtcgtg ctagcgctta
     4921 gcattccgat attgcgcccg gtgctactcg cgatcggttc tccggaactg ctcgccttca
     4981 cgttgttcgg attgtccatg gtggcgacac tgtcgggccg cgcgccgctg aaagggctca
     5041 ccgtggcggg cctcggcctg atgatttcca tgatcgggtc gcgctcggaa agcggcacgc
     5101 tgcgctggac cttcgatacg ctgtatctct atgacggagt gccactggtg ccggcgatgc
     5161 tcggactctt cgctatgccg gaactgtgcg aacttgccgt cgcgcgcagg aagatcgcgg
     5221 gcgaacacgc ctccgacatc aatctctcca accaatggtt gggcgtgcgg gacgtcggcc
     5281 g
//
LOCUS       DATILV010000045         3993 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1034302, whole genome shotgun sequence.
ACCESSION   DATILV010000045 DATILV010000000
VERSION     DATILV010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3993)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3993)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3993
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1034302"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..424)
                     /gene="tolB"
                     /locus_tag="VLJ17_00970"
     CDS             complement(<1..424)
                     /gene="tolB"
                     /locus_tag="VLJ17_00970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511883.1"
                     /note="forms dimers; may be involved in cell envelope
                     integrity; interacts with outer membrane proteins and with
                     the C-terminal domain of inner membrane protein TolA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolB"
                     /protein_id="HSV21579.1"
                     /translation="MASIIGFGGGPAGAVLRFDLNQGNVQPMPIALPDFLAGSSSEGE
                     SARGISQIITANLKRSGLFAPIDQAAFIEKITNTDVQPRYPDWRAINAQALVTGRVTR
                     QPDGRIKAEFRLWDVFGAVQLAGQQYFSTPDNFRRIAHI"
     gene            complement(586..1566)
                     /locus_tag="VLJ17_00975"
     CDS             complement(586..1566)
                     /locus_tag="VLJ17_00975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein TolA"
                     /protein_id="HSV21580.1"
                     /translation="MRTGYTISAIGHTLVLVWALVSFPAKPFDTEPTDAVMADVISER
                     ELSELTAGVKTARQVTKPQPIVDKIGDVKEPPKDLVAKQSDKPEVRTATAQPPAPQPD
                     VKPPDAKPPEPKPAEAKAVTPPTASADPKPEPEPDPIAEALKRDEAKKKEEAKKLEEA
                     RKREEARKREEARKREEARKREEVKSDLDRIETALLDKRAPQRQAVTGTMVNPTPSLG
                     SPIGNAPQLSQNELAMLKAQLMSCWNPPVGVSEARDLVVTVRFSLSRDGFLSGEPIVL
                     NHTRHALFQIAAESATRAVRRCQPFRLPASKYEAWQEVEVNFDPNDMFRG"
     gene            complement(1600..2052)
                     /gene="tolR"
                     /locus_tag="VLJ17_00980"
     CDS             complement(1600..2052)
                     /gene="tolR"
                     /locus_tag="VLJ17_00980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098567 - periplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0061024 - membrane organization [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein TolR"
                     /protein_id="HSV21581.1"
                     /translation="MGVGGVVAEAGSGRRRHRRKAVMSEINVTPMVDVMLVLLIIFMV
                     SAPLLTVGVPIDLPQTQAKSLDQDREPLTLSVNLQGKVFLQNSEIPIEELIPKLKAVT
                     DARGGYDERIYVRGDRKVDYGAVMRVMGRISSAGFRRVALVTEVEQGR"
     gene            complement(2064..2756)
                     /gene="tolQ"
                     /locus_tag="VLJ17_00985"
     CDS             complement(2064..2756)
                     /gene="tolQ"
                     /locus_tag="VLJ17_00985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein TolQ"
                     /protein_id="HSV21582.1"
                     /translation="MIPPDVAPSDLSIFTLFWQAHWIVKSVMIGLMACSVWVWAIAVD
                     KIILYSRTSRAMDGFEQSFWSGQSLEELYRMVSARPNHSMAALFVAAMREWKRSFEGT
                     PRSFAGLQMRIEKVMDVTIMREIERLERRLLVLATVGSAGPFVGLFGTVWGIMTSFQS
                     IAASKNTSLAVVAPGIAEALFATAIGLVAAIPATIFYNKFSSEVNKQAQRLEGFADEF
                     SAILSRQIDERA"
     gene            complement(3126..3575)
                     /locus_tag="VLJ17_00990"
     CDS             complement(3126..3575)
                     /locus_tag="VLJ17_00990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2852 domain-containing protein"
                     /protein_id="HSV21583.1"
                     /translation="MPIVAKLDELGRPAWIALMVLGFCLWWPLGLATLAFIIGSGRMS
                     CWNHHGMGRWQRKMERMQEKMDRMRGRMNPGGTWWGSPPSSGNHAFDEYRAETLRRLE
                     EEQREFHDFLDRLRHAKDKAEFDQFMTERRNRPPEANRPPEPQPQPH"
     gene            complement(3688..>3993)
                     /locus_tag="VLJ17_00995"
     CDS             complement(3688..>3993)
                     /locus_tag="VLJ17_00995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR-like C-terminal domain-containing protein"
                     /protein_id="HSV21584.1"
                     /translation="AMFEAGVPLDASQELREAGDRAFSAIRTAAERLVAPLPPAGRPP
                     ALMVALHVWAMAHGIASLFGRGDAGRRKVPMSPDELLEAGVLVYLRGLGLPNDAATP"
BASE COUNT          789 a         1255 c         1149 g          800 t
ORIGIN      
        1 tgatgtgagc gatgcggcgg aaattgtccg gcgtgctgaa atattgctgg ccggcgagtt
       61 ggacggcgcc gaacacgtcc caaagtcgga actcggcttt gatgcggccg tcgggttgac
      121 gggtgacccg cccggtcacg agggcttggg cattgatggc gcgccaatcc ggatagcgcg
      181 gctgtacatc cgtattggtg atcttctcaa taaatgccgc ctgatcaatc ggagcaaaaa
      241 gaccactgcg cttgagattc gccgtgatga tctgggaaat gccgcgcgcc gattctcctt
      301 cggatgagct gcccgcaaga aaatccggca gcgcgattgg catcggttgt acattgcctt
      361 gattgaggtc gaagcgaagc acagccccag ccggaccgcc gccaaatccg atgatgctgg
      421 cgataccggc ggcggtgccg agtacaatcg tgtgacgacg tgtcaacggg agattgcatc
      481 ggccgtcatc gggagaagtg ttgcggaaat tgcgcctacc ggattggtca tacatggcga
      541 aagtaccctg aagatgaaaa catttgttcc gacgcgacgc ccgcatcaac cgcggaacat
      601 gtcgttggga tcgaagttga cttcaacttc ctgccacgct tcgtatttcg aagccggaag
      661 acgaaacggt tggcagcggc gcacagccct ggtcgcgctt tctgcggcaa tctggaacag
      721 ggcatgcctt gtgtgattaa gcacaattgg ctcgccggag aggaacccgt cccggctgag
      781 cgagaacctc acggtaacca cgaggtctct cgcctccgag acccccacag gcgggttcca
      841 gcagctcatg agttgagcct tcaacatggc gagctcattc tgcgacaact gcggcgcatt
      901 gccgattggc gaaccgagcg acggcgtcgg attgaccatt gtgccggtca cggcctgacg
      961 ctgcggcgcg cgcttgtcaa gcaacgcggt ttcaatgcga tcgagatcag acttcacctc
     1021 ttcgcgtttt ctggcctcct cccgcttgcg tgcttcctca cgtttacgag cctcttcacg
     1081 cttcctggct tcttcgagct tcttggcttc ttccttcttt ttcgcctcgt cgcgcttgag
     1141 ggcttcggcg atcgggtcag gctccggctc cggcttcgga tccgccgagg ccgtgggcgg
     1201 cgtgactgcc tttgcttccg ctggttttgg ttcaggcggc ttggcgtcgg ggggtttcac
     1261 gtcgggttga ggcgcaggcg gctgcgcggt cgccgtgcgg acctccggct tgtccgattg
     1321 cttcgcaacc agatccttgg gcggctcctt gacgtcgccg atcttgtcga cgatcggctg
     1381 cggcttggtg acttgccgcg cggtctttac gcccgcagtc agctcggaca gctcacgctc
     1441 cgaaatgacg tccgccatca cggcgtcagt cggctcggtg tcgaacggct tggccggaaa
     1501 cgacaccagt gcccacacca gaacgagggt atgtccgatc gccgatatgg tgtagccggt
     1561 tctcatccca agcggttgcc ccaaagatcc tctaaacgtt catcgcccct gttcgacctc
     1621 ggtgacaagc gccacccgcc ggaacccggc cgatgatatc cgacccatca cccgcatcac
     1681 cgcaccgtaa tccactttac gatcgccccg cacatagatg cgctcatcat acccgcctcg
     1741 cgcatcggtc acagctttga gtttaggaat aagctcctca atcggaattt cgctgttttg
     1801 caagaacacc ttgccctgca ggttgaccga caaggtcaac ggctcgcggt cctggtcgag
     1861 gctcttcgcc tgggtttgcg gcaggtcgat cggcactccg accgtcaaga gcggcgccga
     1921 caccatgaag atgatgagca gcaccagcat cacgtccacc atcggggtga cgttgatctc
     1981 gctcatcacg gccttacgcc ggtgtcgtct tcggccgctc ccagcctcgg ccacaactcc
     2041 tccaactccc atgtgtgtcc ccgctacgcg cgctcgtcga tctgccgcga cagaatggcg
     2101 gaaaactcgt cggcgaaccc ttccaggcgc tgtgcctgct tgttcacctc cgaactgaat
     2161 ttgttgtaga aaatggtcgc cggtatggcg gccacaagcc cgatcgcagt ggcgaacagc
     2221 gcttccgcaa taccgggtgc aacgaccgca agcgacgtat tcttcgatgc cgcaatcgac
     2281 tgaaagctcg tcataattcc ccagaccgtg ccaaacaggc cgacgaacgg cccggcagac
     2341 ccgactgtgg cgagcaccag aagtctgcgc tccagacgtt cgatttcccg catgatggtg
     2401 acgtccatca ccttctcgat gcgcatttgc agccccgcga acgaacgcgg cgtcccttca
     2461 aaactacgtt tccattcccg catggcggcc acgaacaacg ccgccatgga gtgattcggc
     2521 cgcgccgaca ccatgcggta gagctcttcc aacgattgcc ctgaccagaa gctttgctcg
     2581 aatccatcca tggccctact ggtacgcgag tagagaatga tcttgtcgac cgcaatcgcc
     2641 catacccaga ccgaacaagc cataaggcca atcatcacgc tcttgacgat ccagtgggcc
     2701 tgccagaata gcgtgaagat agacagatcc gacggcgcca catcgggtgg gatcatgact
     2761 catcctttcg gctcgatggc cacagcgaac ccggccggcg ccgatgcgag gacctcccaa
     2821 aggggggcaa gttcggacct gattgggccc gtcaaccttc ggagtctcgc gtgaaatcga
     2881 tgagccgctg tcggcgatta cgaattcccc gcgaaaaatg tccaatcttt gacggcatcg
     2941 ccggtgatcg cccccaccca taacgcggca ttggtggtta acaaccggtt agcgcacacg
     3001 caagaatacc gtgagacggc catatgggcc gatggtcgca ccggggcgaa tccaaacaaa
     3061 gacgaccacc cgctgggcga gtggccgttc ggacttgcaa gccgcccctc gagccaagag
     3121 gagacttagt ggggttgcgg ttgcggctcc ggcgggcgat tggcctcggg cggccgattg
     3181 cggcgctccg tcatgaattg gtcgaattcg gccttgtcct tggcgtgccg caggcgatca
     3241 aggaaatcgt ggaactcgcg ttgctcttcc tctagtcggc gcagggtttc ggcgcggtat
     3301 tcatcgaagg catgattgcc gctggatggc ggactgcccc accaggtgcc accggggttc
     3361 attcttccgc gcatgcgatc catcttctct tgcatacgtt ccattttgcg ttgccaacga
     3421 cccataccgt gatgattcca gcagctcatt cgtccgctcc caatgatgaa ggccagtgtc
     3481 gcgaggccca gcggccacca aagacaaaac ccgaggacca taagggcgat ccaagcgggc
     3541 cttcctaact cgtccagctt tgcaacgatg ggcatgacaa gcctcacaat tgtgaatggg
     3601 gtcacttaag gcgtgaatgt taatcacatt tacatagata cgaggacctc tgggtgttgt
     3661 caagctggct tcaccccccc gacaaattca cggagtggca gcatcgtttg gcaacccaag
     3721 ccctcgtaaa tacacgagaa cgccggcctc caggagttca tcgggcgaca tcggaacctt
     3781 gcgccggcca gcatcaccgc gtccgaacag cgatgcaatg ccgtgcgcca tcgcccagac
     3841 atgcagtgcc accatgaggg ccggagggcg gccagccggc ggaagcggcg caaccaaccg
     3901 ttcagcggcg gtgcgaatcg ccgagaaggc gcgatcgccc gcctctcgca actcttggct
     3961 ggcatccagc ggcacgcccg cctcgaacat tgc
//
LOCUS       DATILV010000046         5299 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4100251, whole genome shotgun sequence.
ACCESSION   DATILV010000046 DATILV010000000
VERSION     DATILV010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5299)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5299)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5299
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4100251"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(413..766)
                     /locus_tag="VLJ17_01000"
     CDS             complement(413..766)
                     /locus_tag="VLJ17_01000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21585.1"
                     /translation="MVIGFVLVATPGHAQINPQALTVAGVSDCIKEAIGTSSVEDNGS
                     VIIFSCDAAKAKTLYNFVGRKVRVQIVQDRNGKFENRPFGNNACYHRIEDASGKAADE
                     FRCDLILAIGDILRD"
     gene            1155..1838
                     /locus_tag="VLJ17_01005"
     CDS             1155..1838
                     /locus_tag="VLJ17_01005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21586.1"
                     /translation="MHIRHIGGIVDFGKFALLRQVMQNRRLAVCWYLTGVNDKARDHE
                     RHFCYLRRRDEFRHLAPELFDQLAKLVADRCTLADPLTALQRSGVLGNAVFLRQEVPK
                     QTSLRPLWAEGIVHSVSGAGLVFLDPDNGIQGQRLTNRHVALAEIAALRRKDRVLIVG
                     HDQSGRKAEVKYLADQMKSLGCDIVEIIRLRLVTSRLYVIVDHDTAMAELTAIFVRKW
                     GHWVKSYRF"
     gene            complement(1915..3438)
                     /locus_tag="VLJ17_01010"
     CDS             complement(1915..3438)
                     /locus_tag="VLJ17_01010"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HSV21587.1"
                     /translation="MTSPKSPRCLLLAVMVSLGVITGSVVSFAQAPSDDSATIGAIDQ
                     AVRTGDFSRAATLLRKAAESGNAEAQYRLASLYRSGRGVPQDEALAFKWMKAAAEQNH
                     ANAQFNVANMYLAGRGVASDVGLATVWLKKAASHGHDEATKRLAEISTRRVVEPAAPN
                     AAPPPTLEGRREPAKIATSAQRSLANTPRTEGTEILTAAWRGQTDAVRKLISAGANIA
                     ARDDDGNTALSLAASIGKVDTVDALLSAGADVNTENRMGERPLMLAAARGHANIVDDL
                     LRRGADINATNRGGESALTVAARQCHEQVVKVLIGRGANLRVTLDRGVTTLMVAAACP
                     QNLLELLISNGAPIDAFDDARRTALWIAADRGNAGGVWALLKGKADQRIADKEGRTPL
                     HMALEHGKGDVAQLLIAISADVNAPTTAGNTPLILAAKSGMTEIVQLLLKKGARPDLR
                     NNLGYNALMMGSQEGQVEVVRALLNAGADRNLRNKKRETASDIATASGHAAIAQLLK"
     gene            3821..4795
                     /locus_tag="VLJ17_01015"
     CDS             3821..4795
                     /locus_tag="VLJ17_01015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridine nucleotide-disulfide oxidoreductase"
                     /protein_id="HSV21588.1"
                     /translation="MTHSAVSQLPVVEPQRRAADKAPIAAKASSEQTRAKPDFAQYRT
                     RLWANVGPLTFGITVAVVLWIGWRNREDSGLTPDSGIGYWLGIVGGSLMVLLLIYPLR
                     KRILSLRPLGTVTFWFRTHMIFGVLGPALILLHANFKLGSINSNMALVAMLAVATSGI
                     IGRYLYGKIHLGLYGRKVVAREIVADADALKGLIGAGLPVADRVVAQLTAFAQLGTAA
                     PKGVLTGLFLLPVISFRARVVRARLLADVRKVIAVEGKRIGWSRKVRRRQLAGVSDLV
                     TLHVAAVKKAAAFAFYERLFGLWHVFHLPLFCLLVIAAVIHVFAVHFF"
     gene            4811..>5299
                     /locus_tag="VLJ17_01020"
     CDS             4811..>5299
                     /locus_tag="VLJ17_01020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016920452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HSV21589.1"
                     /translation="MSRRFMQMLAIGLVLASAAASVVRSQNLFEKLVIPGPVVDGHAK
                     LEKDCGNCHEPFSRKSQTRLCLACHKETAADRQSVKKFHGRQPDAAKQECNHCHTDHK
                     GRKADIVQLDRETFNHTFANFELRDAHKAVQCDGCHAPTIKYRNTPGRCFDCHKMNEP
                     HKG"
BASE COUNT         1062 a         1540 c         1494 g         1203 t
ORIGIN      
        1 cgccgcaacc atggcatccg cctttgcccc ataaagggtg agggcgccac ctcgctcacg
       61 gccgctttgc ggtgcgttca tggtgctgac gagccgatgc tgggggggca ctctcggcgc
      121 cgcgagcacc cattgcgcgc cacaacagga gaaagcatcg ccaactaacg acgcggacga
      181 agtcacatcc agcatcgacc gtccaacaag ttgtcattcg caaatcccac cgtatttgaa
      241 tagccggccg gcaccacgca atgctcccca gtcctcatca aggccctgcc gctgttgatc
      301 ttgccgccgc gaacttgcca tgtcctccgg atcacggttg tgggatccgg ctcgccgctt
      361 ttgcggcgtg ccggcatgac accgcataag atttgatatt caaagtgctg ttctagtcgc
      421 gcaatatatc gccgatcgct aggatcaggt cgcagcggaa ttcatccgca gctttgccgc
      481 tcgcatcctc gattcgatgg tagcacgcat tatttccaaa cggtctgttc tcgaatttgc
      541 cattacggtc ttgaacgatt tggacgcgaa cctttctgcc gacaaaattg tacagggtct
      601 tggccttcgc tgcgtcacac gaaaaaatga tcaccgaacc gttgtcttcc acagaactgg
      661 tgccgatcgc ttctttgatg caatcgctca caccggccac agtcaacgct tgtggattta
      721 tctgtgcgtg gccgggtgtg gcgacaagca caaaaccgat taccactagc catctaccca
      781 tgtgcgcctc caaccggcag tcgcgtgtgg acgctgtcag cctagtacaa cttcgttccc
      841 gttcaactaa gctgttccat acttcgtttt cacctcaatg cccatgctct tgagaaaggt
      901 ggccggaaga attctgacca cgcagacagt gacgccgcgg ccccccaagc cgccgctttt
      961 gaccggcaac gtgatatggt cgaaaatctc ggcgccgaga acgctgcagg gctagagtat
     1021 catcttgcgc gatagccagt tcaataacca agatcgtctt ttaagatgtg atttgggagc
     1081 aacgttcggc ggaaatccgt tgtgataagc gcgcaagacc cgacgtcctc cgttatacgt
     1141 aaggggggcg cgctatgcat attcgccata ttggaggaat tgtcgacttt ggaaaatttg
     1201 ctctgcttcg gcaagttatg caaaatcgcc ggcttgccgt ttgctggtac ctaaccggag
     1261 tgaacgataa agcgcgggac cacgaaagac atttttgtta tcttagacga cgcgatgaat
     1321 tccggcacct cgctccagag ttatttgatc aactagcaaa attggttgcg gatcggtgta
     1381 cgctcgctga tccactgacg gccttgcaaa ggagtggtgt gttgggaaac gcagtattcc
     1441 tccgacagga agtccccaaa caaacgtcct tgcgtccgct ctgggccgag ggcatcgttc
     1501 attcggtgag cggtgccggc ctagtattcc tcgatcccga caacggaatt caggggcagc
     1561 gattgaccaa caggcatgtg gcattagccg aaatagcggc cctgcggcgc aaggataggg
     1621 tacttatagt cggtcacgac cagtccggcc gcaaagccga agtcaaatat cttgctgatc
     1681 aaatgaaatc tcttggttgc gatatcgtag agattattcg tctgcgcctc gttacgtcac
     1741 gcctttacgt cattgtggac cacgacacgg ccatggctga actcaccgcg atattcgtcc
     1801 ggaagtgggg tcattgggtc aagtcctacc gcttttgagg gccgctcgcg agtaggcttg
     1861 agcgcctcct cgacgccgcc gtgtgggtaa tttgtttggg ctaaaagccc gaagctactt
     1921 cagcaactgt gcgatcgccg catgcccgga ggccgtagcg atgtcgcttg cagtttcgcg
     1981 cttcttgttg cggagatttc gatcagcccc ggcattcaag agcgccctca cgacttccac
     2041 ttgcccttcc tgggagccca tcataagcgc attgtacccg agattgtttc gcagatcggg
     2101 gcgtgccccc tttttgagga gcaactgaac aatctccgtc atgccggatt tcgcggccaa
     2161 tattaatggc gtatttcccg ccgtcgtagg cgcgttaacg tcggcgctga tggcgatcag
     2221 aagctgggcc acgtcacctt tgccatgttc aagcgccatg tgtaatggcg ttcggccctc
     2281 cttatcggcg atacgttggt cggccttgcc cttgagcaac gcccatacgc cgcccgcgtt
     2341 gccacgatca gccgcgatcc acagggcggt tcgtctcgca tcgtcgaacg cgtcaattgg
     2401 tgctccgttc gaaatgagca attccaacag attctgtggg caggcggcgg caaccatcag
     2461 cgtcgtcacg cctcggtcta gagttacccg caagtttgcc ccgcggccga tcagaacttt
     2521 gacaacctgc tcgtgacatt ggcgcgccgc aacggttaag gcggattcgc caccgcggtt
     2581 tgtggcattt atgtctgccc cccgtcgaag cagatcatcg acgatattgg catgacctcg
     2641 cgccgccgcg agcatcaacg gccgctcgcc catgcgattt tccgtattga cgtcggcacc
     2701 ggccgacagc agggcgtcaa cggtatcaac tttgccaatg gatgctgcaa gtgaaagcgc
     2761 ggtgttgccg tcgtcatctc tggctgcgat atttgcgccg gcagagatca attttcggac
     2821 agcgtcggtt tgaccgcgcc aggcggcggt caatatttct gtgccttcgg ttcggggagt
     2881 attcgccaag ctgcgttgtg ctgacgtcgc gattttggcg ggttcgcgtc ttccctcaag
     2941 cgtcggcggt ggcgcggcgt ttggcgcggc cggctcgacc acgcgacgcg ttgagatctc
     3001 tgcaagacgc ttggtggctt cgtcgtgtcc atgtgaagct gccttcttga gccagacggt
     3061 ggcgaggccg acatccgatg ctacaccacg acccgccaga tacatgtttg cgacgttgaa
     3121 ttgagcgttg gcgtggtttt gctcggcggc ggccttcatc catttgaaag cgagagcttc
     3181 gtcttgaggc accccgcgtc cggagcggta cagcgaggcc agccggtatt gcgcttcagc
     3241 atttccggat tcggcagcct tgcgcagcag cgtagccgcg cggctgaaat cacctgtccg
     3301 aacggcctgg tcgattgcgc ctattgttgc gctgtcgtcg ctaggtgcct gcgcaaacga
     3361 caccacgctg ccggtaataa cgccgaggga caccattacg gcaagcaaaa ggcagcgcgg
     3421 tgatttgggc gaagtcatac ttcgtgctac acctaggtgt tcccccctag acaacggcta
     3481 caacgaaacg ccatgttttg catgatatcg ctaataatga tttcggcttg cggccgtctc
     3541 agacgtcgcg accgcgattc ttttgcattt gattgcggca gaatcttaac ttgaccgcac
     3601 caccagtcgc ttcccgtcat ccgtaactaa acctaggggc gcatccggat gcgtgcatac
     3661 catctgacag ctaattgtca gattccacaa aacggtcggt gttttttcaa gttgttgccc
     3721 ctctgggaag atcggatcag ccccaattgg cgaccaagcg ggaggctgag gtttcaaagg
     3781 ggggtgctga ataggcgcgc ggtcgcgcgg tggggaaaca atgacccatt cagcagtttc
     3841 acaattgccc gtcgtcgagc cgcagcgacg cgcagccgat aaagccccta tcgcagccaa
     3901 agcatctagc gaacagacgc gcgcaaagcc ggattttgct caataccgta cgcgtctgtg
     3961 ggccaacgtc ggacccttaa cgtttggcat cactgttgcc gtcgtcctct ggattggttg
     4021 gcgcaaccgt gaggacagcg gcctcacgcc tgacagcggc atcgggtatt ggctcggaat
     4081 tgtgggcggc agccttatgg ttctcttgct gatttacccg ctgcgcaaac gcatcctatc
     4141 tctgcggccg ttgggcacgg ttacgttctg gttccgcacc cacatgatct ttggtgtgct
     4201 cgggcctgcc ttgatcctgt tgcacgcaaa tttcaaactc ggctcgatca acagcaatat
     4261 ggccctcgtg gcgatgctcg cggtagccac cagcgggatc atcggacggt atctctatgg
     4321 caagatccat cttgggctgt acggacgcaa agtggtcgcg cgagagattg tggctgatgc
     4381 cgacgcgctg aagggactta tcggcgcagg tctgcccgtt gccgaccgcg tcgttgcaca
     4441 attaaccgcg tttgcgcagc ttggtacggc cgcgcccaag ggcgttctca cggggctttt
     4501 cttgctgcca gtgatcagct ttcgtgcacg ggtcgttcgc gcgcggctgc ttgccgacgt
     4561 gcgcaaggtc atcgcggtcg aaggcaagcg gattggatgg tcgcggaagg ttcgacgccg
     4621 gcagctcgcc ggcgtatccg accttgtgac gttgcatgtc gcggcggtaa agaaggccgc
     4681 ggcctttgca ttttacgaac gcctctttgg gctttggcat gtcttccatt taccgttgtt
     4741 ttgcctcctc gtgatcgctg ccgttattca cgtcttcgcg gtgcatttct tctgagcgga
     4801 ggctcgacca ttgagccggc gcttcatgca gatgctcgcg atcgggctgg tactcgccag
     4861 cgctgccgca tcggtcgtgc gttcgcagaa cttgtttgag aagcttgtca ttccgggacc
     4921 ggtcgtcgat ggacacgcca aactcgagaa agactgcggc aactgccacg agccgttctc
     4981 acgcaagtca caaacgcgac tatgcctggc atgccacaag gaaacggccg cggatcgcca
     5041 gtcagttaag aaatttcatg gtcgtcaacc ggatgcggcg aaacaggaat gcaaccattg
     5101 ccacaccgat cacaaggggc gaaaagccga catcgtgcag ctcgatcgcg agacgttcaa
     5161 tcacacgttc gcgaatttcg aactgcgtga cgctcacaag gccgttcagt gcgatggatg
     5221 ccacgcacca acgattaagt accgcaacac acccggacgc tgcttcgact gtcataaaat
     5281 gaacgaaccg cacaaggga
//
LOCUS       DATILV010000047         3633 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3078640, whole genome shotgun sequence.
ACCESSION   DATILV010000047 DATILV010000000
VERSION     DATILV010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3633
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3078640"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..385
                     /locus_tag="VLJ17_01025"
     CDS             <1..385
                     /locus_tag="VLJ17_01025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495540.1"
                     /note="FabF, beta-Ketoacyl-ACP synthase II, KASII;
                     catalyzes a condensation reaction in fatty acid
                     biosynthesis: addition of an acyl acceptor of two carbons
                     from malonyl-ACP; required for the elongation of
                     short-chain unsaturated acyl-ACP; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
                     /protein_id="HSV21590.1"
                     /translation="IRDAGLTPNDIDYVNAHGTSTPENDKMEYFGCASVFGERMKTLP
                     ISSNKSMIGHTLSAAGAVEAVFTLLTLQHQRIPPTINYITPDPAIPLDVVPNQARDAS
                     MRHAISNSFGFGGQNVSLVMGLEPA"
     gene            408..1430
                     /locus_tag="VLJ17_01030"
     CDS             408..1430
                     /locus_tag="VLJ17_01030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HSV21591.1"
                     /translation="MRVLRLIADRKLELADVPPPAPPGEGEVQIRIKAVALNHLDLWG
                     YRGMAFAKRQLPLVVGAEASGEIALVGKGVTGFKPADKVVMYGAMTCGRCAACRGGRD
                     NLCENVGGIMGFHIDGFARDRINLPARLVIPVPAGVSLRDAACAPIAFGTVEHMLFDN
                     AKLRPGETILVHAGGSGIGSVAITMAKALGCTVITTVGDDAKAEKAKALGADHVINYK
                     TERFEGVTRKLTAKKGVDVVFEHVGGEGFNGSLLCLKRGGRLVTCGSTAGPTVTINLM
                     QLFQQQYKIFGSFGASMKNIRDGLSKIAAGMTPIIDTEVELADFERGLARLESRQVFG
                     KVIVNF"
     gene            1502..2437
                     /locus_tag="VLJ17_01035"
     CDS             1502..2437
                     /locus_tag="VLJ17_01035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A biosynthesis lauroyl acyltransferase"
                     /protein_id="HSV21592.1"
                     /translation="MRRLIRRLRRGFKRACDALISTIAIGLLNGMRLTDPDKMADFAG
                     WMMRTIGPLLKESRIGRANLTKAFPEKSRAEIDATLYDCWDNLGRVGAEFAHLDRLWD
                     FDPDHPGSCGRIEITQQDMDRFARLLNDGKPALVFAAHLANWELPAVCAATYQLDSAV
                     LYRRPNIPGIDRWLRDTRTTSMGELISTGLEAPVKIASALERGAHVGMLVDQYYVRGV
                     PVTFFGRRTTANPLLARLARHFDCPIHGTRIIRLPGHRFRAELTEAVTPARDAEGKID
                     ITGTMQVITSIIEGWIREHPEQWLWLHRRWRSEDQ"
     gene            complement(2442..3512)
                     /locus_tag="VLJ17_01040"
     CDS             complement(2442..3512)
                     /locus_tag="VLJ17_01040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HSV21593.1"
                     /translation="MVLGFAVINVAAAQNTRVVNVYNWSDYIEPKVLEDFTKATGIKV
                     QYDTFDANETLETKLLAGRSGYDVVVPTAYFLERQIKAGVFQKLDKSKLSNLGSVWPE
                     IAKRLAVYDPGNQYAVNYMWGTTGIGYNVKAMRERLGTDAKIDSWDIVFKPDNLAKFK
                     SCGVQMLDSADDIIPAALHHLGLDPNSVDSKELEKAADLLMNIRSSVRKFHSSEYLNG
                     LAGGEICLVVGWSGDIKQAQKRALEAKNGVEIGYSIPKEGAQMFFDNFSIPKDAAHVA
                     EAHAFIDYLLKPEVAAKNSNLVSYANGNLASQKFIDKAVLDDKSIYPDAVTMSRLYIV
                     SARDQKSQRLLNRLWTKIKTGR"
BASE COUNT          746 a         1026 c         1047 g          814 t
ORIGIN      
        1 tattcgcgac gcgggtctta cgccgaatga tattgattac gtcaacgcgc acggcacgag
       61 cacgccggaa aatgacaaaa tggaatattt cgggtgtgcg agtgtcttcg gcgagcgcat
      121 gaagactctg ccgatttcgt ccaataaatc gatgatcggc catacgcttt cagcggctgg
      181 cgcggtagag gccgtgttta cgctgctcac tctccagcac cagcgcattc cgccgaccat
      241 caactacata acccccgacc cggcgatccc gcttgacgtc gtacccaatc aagcgcgcga
      301 cgcgagcatg cgccacgcta tttcgaattc gttcggtttc ggcgggcaaa acgtttcgct
      361 ggtcatgggg ctcgagccgg cctagtggct gtgtgagcca atccgccatg cgtgtgctga
      421 gactaatcgc cgatcgtaag ctcgagcttg ccgacgtgcc gccgcccgcg ccgcccggcg
      481 aaggcgaggt acaaattcgc atcaaggcag tcgcactcaa tcacctcgac ctgtggggct
      541 accgcggcat ggctttcgcc aagcgacagc taccgctggt cgtgggcgct gaagcctcag
      601 gcgaaattgc cttggtaggc aaaggcgtca caggcttcaa gcctgccgac aaggtcgtaa
      661 tgtacggcgc catgacttgt ggacgatgcg ctgcgtgtcg aggaggccgt gacaatttgt
      721 gcgaaaacgt cggcggcatc atgggtttcc atattgacgg ctttgcgcgc gaccgaatca
      781 acctgcccgc acgtctggtg attccggtac cggccggtgt ttcgctgcgg gatgccgctt
      841 gcgcacctat cgctttcggc actgtcgagc acatgctttt cgacaacgcg aagctcaggc
      901 ccggtgagac catccttgtg catgccggcg gttccggcat cggttcggtt gccatcacga
      961 tggcgaaggc ccttggctgc accgttatta ctacggttgg cgatgatgca aaggcagaga
     1021 aggcaaaagc gctcggcgcc gatcatgtga ttaactacaa gaccgaacgt ttcgaggggg
     1081 tcacccgtaa gctcactgcg aagaaaggtg tcgatgtcgt ttttgagcat gtcggtggcg
     1141 agggttttaa tggctccctc ctctgcctca agcgtggcgg gcggctagta acatgcggct
     1201 cgaccgcggg accgactgtg acaattaact tgatgcagtt gttccagcag caatacaaaa
     1261 tttttggctc atttggcgcc tcaatgaaaa acatacgaga cggtctgtcg aagatcgcgg
     1321 ctggcatgac gccgattatc gacactgagg ttgaactcgc cgattttgaa cgtggacttg
     1381 caaggctaga gagccgccag gtgttcggca aagtgatcgt gaatttctag cgcaagatcc
     1441 cgaaaaacgg ctcccgctgt ccggaaaaga tcatgtgcca cgacgctaca gactcattgc
     1501 gatgaggcga ctaattcgcc gcctgcgccg cggtttcaag cgcgcatgcg acgcgttgat
     1561 cagtacaatc gcgatcggcc tgctcaatgg catgcgtttg accgacccgg acaagatggc
     1621 cgattttgcc ggctggatga tgcgcacaat cggccccctg ctgaaggaaa gccggatcgg
     1681 tcgcgccaat ctcacgaaag ctttcccgga aaaatccaga gctgagatcg acgccacgtt
     1741 gtatgattgc tgggataatc ttggccgtgt gggcgccgag tttgcccatc tcgatcgttt
     1801 gtgggatttc gaccccgacc accccggatc gtgtggccgc atcgaaatca cgcaacagga
     1861 catggatcgt tttgcaaggc tgttgaatga cggcaagccc gcgctggtat ttgccgccca
     1921 tctcgccaat tgggaattgc cggcggtttg tgccgcgact tatcaactcg atagtgcggt
     1981 gctctaccga cggccaaaca ttcctggtat cgaccgttgg ctgcgcgaca cccgcacgac
     2041 cagtatgggt gagttgatct ccacgggtct tgaggcaccg gtgaagattg cctcggcgct
     2101 tgagcggggc gcccacgttg gtatgctggt cgatcagtac tacgtgcgtg gcgtgcctgt
     2161 gacctttttt ggtcgccgca ccacggccaa tcccttgctt gcgcggcttg cccgccattt
     2221 cgattgcccg atccacggca cccggattat ccgactgccc ggccaccggt ttcgcgcaga
     2281 gttaaccgaa gcggtcaccc cggcgcgcga cgctgagggc aagattgaca tcaccggcac
     2341 catgcaggtc atcacctcga taatcgaagg ctggatccgt gagcatccgg agcaatggct
     2401 ctggctacac cgccgctggc ggtccgaaga tcagtagccg gtcaacgccc ggtcttgatc
     2461 tttgtccata accggttcag cagacgttgt gatttctggt cgcgcgcgct gacgatatac
     2521 agccggctca tggtgacggc atccgggtag atgcttttat cgtcgagcac tgctttgtcg
     2581 atgaactttt ggctcgcaag atttccgttg gcgtaggaaa ccaggttgct gttcttcgca
     2641 gccacctcag gttttaaaag ataatcgatg aaggcgtgcg cttcggccac atgggctgcg
     2701 tccttcggta tggaaaaatt gtcgaagaac atttgcgcgc cttccttcgg gatcgaatag
     2761 ccgatctcga ctccgttctt ggcttcgagc gcacgctttt gcgcttgctt gatgtccccc
     2821 gaccagccaa ccaccaggca aatttccccg ccagccaaac cattgagata ttcggacgag
     2881 tggaatttgc gcactgaaga tcggatattc attagcagat cggcggcttt ttccagctct
     2941 ttcgaatcaa ccgaattcgg gtcaaggcca aggtgatgca gcgcggctgg tatgatgtca
     3001 tcggccgagt ctagcatttg aacgccgcag ctcttgaatt tcgccagatt gtccggcttg
     3061 aaaacaatgt cccagctgtc gatcttggcg tcggtaccga gccgctcacg catcgccttg
     3121 acgttgtagc cgatgccggt ggtgccccac atgtaattga cggcgtactg attgcccgga
     3181 tcgtaaaccg ctaaccgctt tgcaatctcg ggccagacgc tgccaagatt gctgagcttg
     3241 ctcttgtcga gtttctggaa cacaccggct ttgatctgcc gttccaggaa ataggcagtc
     3301 ggaaccacta catcgtaacc ggacctgccg gcgagcagtt tggtctcaag ggtctcgtta
     3361 gcatcgaaag tatcatattg aactttgatg ccggttgcct tggtaaagtc ctcaaggact
     3421 ttgggctcga tgtagtccga ccaattgtag acattgacca cgcgcgtatt ctgcgcggca
     3481 gccacattga taacggcgaa gccaagaacc attgcggcaa cggcgaatgc gcgacgcatg
     3541 aagcctcgga tcgatgtgtt tcaggtcttg gtcggaaggc cggccgcctt ccaggcgata
     3601 atgccaccgg cgagatgggc actgtaagga tat
//
LOCUS       DATILV010000048         1832 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4611925, whole genome shotgun sequence.
ACCESSION   DATILV010000048 DATILV010000000
VERSION     DATILV010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1832)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1832)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1832
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4611925"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            11..154
                     /locus_tag="VLJ17_01045"
     CDS             11..154
                     /locus_tag="VLJ17_01045"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate binding protein"
                     /protein_id="HSV21594.1"
                     /translation="MLKGEKPADLPFQQSTKVEFVINLKTAKALGLTIPYPLLGRADE
                     VIE"
     gene            320..1351
                     /locus_tag="VLJ17_01050"
     CDS             320..1351
                     /locus_tag="VLJ17_01050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012778812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HSV21595.1"
                     /translation="MQAITTIGLDIAKSVFQVHAVDAKGNVVLRRQIKRRYVLAFFQK
                     LPPCLVGIEASASAHHWSRQLQALGHTVRLMPPAYVTPYVKRHKNDAIDAEAICEAVT
                     RPNMRFVATKTREQQSCLTLQRTRHLLIRQQTSVINAIRAHLAEFGIVAPVGRNGVDQ
                     LLGIVADASDKRLPELARACVAALGTQLGTLKAQILQFDRLIMAWHRSSEASRRLDDI
                     PGVGPALATALVATVADPRAFRSGRNFSAWIGLVPKQHSSGGKDRLGSISKRGDRYLR
                     FLFVAGALAVIRYAKIHGTKHRPWLTALLARRHTKVAAIALANKIARMTWAIMAKGEH
                     YKEPVALAA"
BASE COUNT          371 a          569 c          551 g          341 t
ORIGIN      
        1 cgccgggaga atactcaagg gtgagaaacc ggctgatcta ccttttcaac agtcgacgaa
       61 agtcgagttc gtgataaatc tcaaaaccgc gaaagcgctg ggcctcacca tcccgtatcc
      121 gctgctcggc cgcgccgacg aggtgatcga ataacggcgt tttgtgctgc agtgcagaat
      181 gtctgctttt ggcacctaac ggacatggca cggttttcgg cgacgtctgc tttcgatgct
      241 gtggacggct cctccaccgg cacgggagtg ccatggaagt gggtgccgat aaggccccac
      301 gattcggagg agccaagtca tgcaagcgat tacgaccatc ggtctcgaca ttgcgaagtc
      361 ggttttccag gttcacgccg tcgatgcgaa gggcaatgtg gtgcttcgcc gccagatcaa
      421 gcggcgctac gttctggcgt ttttccagaa gctgccgccg tgcctggttg gcatcgaagc
      481 cagtgcctcg gcgcatcatt ggtcgcgcca actgcaagcg cttggccaca ccgttcgcct
      541 gatgccgccg gcctacgtga cgccctatgt gaagcggcat aagaacgatg cgattgacgc
      601 cgaggcgatc tgtgaggcag tcaccagacc caatatgcgg tttgtggcga ccaagacacg
      661 cgagcaacag agttgcctga cgctgcaacg gacccgccac ttgttgatcc gtcagcagac
      721 ctcggtgatc aatgccatcc gcgctcatct tgccgagttt ggcatcgtcg cgccggttgg
      781 gcgcaacggc gtagaccaac tgctaggcat cgtcgccgat gcaagcgaca agcggctacc
      841 cgagctcgcc cgggcgtgtg tcgccgctct cggcacccaa ttggggacgt tgaaggctca
      901 gattctgcag ttcgatcgtc tgatcatggc ctggcaccga tccagcgagg caagccggcg
      961 gctcgacgat ataccgggcg tcggtccggc actggccacc gctctggtcg ctaccgttgc
     1021 cgacccgcgg gcgttccgat caggacgcaa tttctcagcc tggatcggcc tcgtgccgaa
     1081 gcaacactcg agcgggggca aggaccggct cggcagtatc agcaaacgag gtgaccgcta
     1141 tctgcgcttc ctgtttgtgg ccggcgcact ggccgtcatc cgctatgcca agatccatgg
     1201 caccaagcac cggccctggc tcacagcatt gctggcgcgg cgccacacca aggtcgccgc
     1261 catcgcgctt gccaacaaga tcgcccggat gacatgggcg atcatggcca agggcgagca
     1321 ctataaggaa cccgtcgcgc tcgcggcata aacgagatcg cgccggacaa ccggcgtgat
     1381 gtgaaggttg ggaggacgaa cagcacgtaa tgcagagccg gtcgatccgg cgatcaggac
     1441 aacccagttg cccccaagca ttgtcgaatg cgggctttcg atcgggacct gatccgcgga
     1501 gggcattatg gccagcggtc gtgtgaaccg catctaaagg ccgaacacac gggcgcaccg
     1561 accaatgctg caaacgtgaa aaaagttctt gccaactcgg agccgtccac acacggggct
     1621 aaacgggctc ccgaccccga tctacaggcc gcgaggtgca gcttcaatat tgttgagcgc
     1681 gtggcgcgcg cccctcgcgc cacgaccttg gatatccgat caggtttcgt acttgaagga
     1741 gagcgccaca cgggtgcgga acgccgtgac ctttccacct tcgactttca tgtccatttt
     1801 caccacctcg gccacgcgca gatcgcgtat cg
//
LOCUS       DATILV010000049         3351 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4612320, whole genome shotgun sequence.
ACCESSION   DATILV010000049 DATILV010000000
VERSION     DATILV010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3351)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3351)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3351
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4612320"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1193
                     /locus_tag="VLJ17_01055"
     CDS             <1..1193
                     /locus_tag="VLJ17_01055"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HSV21596.1"
                     /translation="GAETWTGHMYSPQEAAHLSGIREIWAASEFAPFISALSKHQVYR
                     PAPENILLSSLPDTANANSFESLFGAAAKNEAGLYLLSFPPEGESKEYRQEQRFAAAW
                     TKDPGGFAIQNASPIFAQMRLRKSPMELELMQHAIDISIEAHQRAQAFASQAKWEYEV
                     DAQVAYTFKLRNADNWGYPDIVGCGPNATTLHYEESQGPVKTGQLMLMDVGAEYDHYS
                     ADVTRTFPVSGKFSKEQAEIYQIVYDAQEAAAKAAKPGATLSDAHRASLEVIKDGLLR
                     LGLITDRNSEQYRNWFMHSNGHWLGMNVHDVGGGARFEPGMTFTNEPGIYVRMDALDN
                     LPKTTENEKFIAAIKPAFEKYKGIGVRIEDDLVITPEGVRWMTAALPRSIADIEAFIA
                     RARR"
     gene            complement(1256..1714)
                     /locus_tag="VLJ17_01060"
     CDS             complement(1256..1714)
                     /locus_tag="VLJ17_01060"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon monoxide dehydrogenase subunit G"
                     /protein_id="HSV21597.1"
                     /translation="MKIEGVQKLHALREQVYSALTDPKILQRCIPGCESLEKTADNTY
                     AAILKAGVGAIKGTFKGEVRLEDIRPPEHYRIVVEGKGAVGFARGSADFDLTEEDSVT
                     LITYSGELQIGGTIAGVGQRMIEAAAKMMAARFFAALEAEVTADADAATR"
     gene            complement(1857..2720)
                     /locus_tag="VLJ17_01065"
     CDS             complement(1857..2720)
                     /locus_tag="VLJ17_01065"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HSV21598.1"
                     /translation="MISTQFDYVRAQTLDEALTLLAQNEDAKILAGGHSLIPAMKLRL
                     AMPPLLIDIGRIAELSYIRKEGSQIRLGAMTSHYQIESSELLKKICPLLPECAGQIGD
                     VQVRNKGTIGGSVAHSDPAGDWPAAVIALNAELVVAGKNGERSINADEFFVDLMTTAL
                     QPGEILREIRVNQTTGRTGQAYVKMHHPASGFAVVGVAANLALDDNGTCRKASIGITG
                     VSSKAYRAQAVEAALNGNSLDDQGTAKAATRATDGVDISGDLFASESYRRHLAAVYTR
                     RAVAIAVERAG"
     gene            complement(2866..>3351)
                     /locus_tag="VLJ17_01070"
     CDS             complement(2866..>3351)
                     /locus_tag="VLJ17_01070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSV21599.1"
                     /translation="LSATYFFEPKNFTFPFGTHICVVEIDKDTGETKFLRYVAVDDCG
                     KVINPLLVDGQVHGGIVQSIGQALYEEVVYDEQGQLVTGELMDYAIPRATQLPWFELD
                     RTETPSPVNPLGVKGVGEAGTIGATPAIVNAIVDALSPYGVKHLDMPARPEAVWKLIS
                     R"
BASE COUNT          729 a          969 c          931 g          722 t
ORIGIN      
        1 ccggcgcgga aacctggacg ggtcacatgt acagtccgca agaggctgcc cacctttccg
       61 gaatcaggga aatctgggca gccagcgagt ttgcaccgtt cattagcgcg ctgagcaagc
      121 accaggttta ccggcccgcg cctgaaaaca tcctgctctc gtccttgcca gacaccgcta
      181 acgcgaatag ttttgagtca ctcttcggag cggcagcaaa gaatgaggcc gggctgtacc
      241 tgctctcgtt tccacccgaa ggtgaaagta aagagtatcg tcaggagcaa aggttcgccg
      301 ccgcctggac gaaggatcca ggaggctttg cgattcagaa tgcctcgccg atctttgccc
      361 agatgcgttt gcgaaagtct ccgatggaac tcgagctaat gcagcatgcg atcgacatca
      421 gcatcgaggc gcatcagcgc gcgcaagcct tcgcgtcgca ggccaagtgg gaatacgaag
      481 ttgatgcgca ggtggcttac actttcaaac tgcgtaacgc agacaactgg ggttatccgg
      541 atatcgtcgg ctgtgggcct aatgccacga ctttgcacta cgaagaatca cagggaccag
      601 tgaagacggg tcagttaatg ttgatggacg tcggcgccga gtacgatcat tattccgccg
      661 acgtgacgcg cacgtttccg gtgagcggaa agtttagcaa agagcaagct gagatttatc
      721 aaatcgtcta cgatgcgcag gaagcagcgg cgaaagccgc aaaacccggg gcgaccctgt
      781 cagacgcgca ccgcgcgtct ttggaagtga tcaaggatgg gctgctgagg ttgggcttaa
      841 tcaccgatcg caattccgag caataccgga attggtttat gcattcgaac ggtcactggc
      901 tgggaatgaa tgttcacgat gtcggcggcg gcgcgcggtt cgaacccggc atgactttta
      961 cgaacgagcc gggcatatac gtccgcatgg atgccctcga taatctgccg aagactaccg
     1021 agaatgaaaa gttcattgcg gccatcaagc cggccttcga gaaatacaag gggatcggcg
     1081 tccgcatcga agatgacctg gtaatcactc ccgagggagt ccgatggatg accgctgcct
     1141 tgccgcgcag cattgccgac atcgaagcgt ttatcgcgag ggcgcggcgg taaccaaagc
     1201 aaagtctaaa aatcaaaccg aatctactcg agctagtttt ccgacgaaag caaattcagc
     1261 gggtggcagc gtccgcgtcg gctgtgactt cggcttccag cgcggcgaaa aatcgcgcgg
     1321 ccatcatttt cgcggccgcc tcgatcattc tttgcccgac tccggcaatc gtcccgccga
     1381 tttgcaactc tccggagtaa gtgatcagag tgacgctgtc ctcttctgtc aaatcgaaat
     1441 ctgcagagcc cctggcaaat ccaaccgcgc ctttgccttc gaccactatg cggtaatgct
     1501 cgggcggccg tatatcctcc agacgcacct cgcctttgaa ggtgcccttg atggccccga
     1561 caccggcctt caatattgcc gcatatgtgt tgtcggcggt tttttcgagg gactcacaac
     1621 caggaatgca gcgttgcaga atctttggat cggtcaatgc agagtagacc tgttcgcgaa
     1681 gcgcgtgtag tttctgaacc ccttcgattt tcatctctag tctacccgca gattgcgcgg
     1741 atacacagat caagacatgg cagccgagcg cgggagtggc atagcagact tccattcgcc
     1801 gcttttagaa tctcgcctgc ttatctatgt aatctgcgca atctacggac tgatttctat
     1861 cctgcccgct caaccgcaat cgcgaccgcc cgtcttgtat aaaccgcggc tagatgcctt
     1921 cgataacttt ctgacgcgaa cagatcgcca cttatgtcga cgccgtcagt ggcccgggta
     1981 gccgcctttg ctgtgccttg atcgtcgagc gaatttccat tcagcgccgc ctcaaccgcc
     2041 tgggcccgat atgcctttga cgagacgccg gtgatcccaa tgctcgcttt gcgacaggtg
     2101 ccgttatcgt caagcgcgag gttcgccgct acgccgacga cggcaaagcc cgacgcgggg
     2161 tggtgcatct tgacgtaagc ctgaccagtg cggccggtgg tttggttgac ccgaatctct
     2221 cgcagtatct cgcccggctg aagcgcggtc gtcatcaggt cgacgaaaaa ctcatcggcg
     2281 ttgatcgaac gctcgccatt cttgccggcg accaccagtt cggcgttgag cgcaatcacg
     2341 gccgcaggcc aatcgccggc cggatcagag tgggccacgc tgccgccaat tgtccccttg
     2401 tttcgcacct gcacgtcgcc aatttgtccg gcgcattcag gcagcaacgg acaaatcttc
     2461 ttgagcagct cggacgattc aatttgataa tgagaagtca tcgcgcccag acgtatctgg
     2521 ctgccctctt tgcgaatata agagagctcc gcaatgcggc cgatatcgat gagcagtggc
     2581 ggcatcgcca ggcgcaactt catcgccggg atcaggctgt gcccgccggc gagaattttg
     2641 gcgtcttcgt tttgcgccaa cagcgttaac gcttcatcga gtgtctgggc gcgcacataa
     2701 tcaaattgtg tcgagatcat gaaatctcct tttttggagt gcggtaactt gttaccgctt
     2761 tcgaaggccg cgacttgtcg cggctggcta gaggctgcag ttgcacggct tgcggcgaca
     2821 ggtcgccgca taccaaggcg ttgacaagtg agcgcactcc aaatgctaac ggctgatcaa
     2881 tttccaaact gcctcaggcc gcgccggcat atccagatgc ttcacgccgt acggcgacag
     2941 cgcatcgaca attgcattga cgatcgccgg tgtggcgccg atagttccgg cctcgccgac
     3001 gcctttcacc cccagcggat tgaccggcga aggcgtttcc gtgcgatcga gttcgaacca
     3061 cggaagctgc gttgccctgg gtatcgcata gtccatcaac tcgccggtga ccagttgccc
     3121 ttgttcgtcg tacaccactt cttcgtacag tgcctgaccg atcgactgca cgatgccacc
     3181 atgaacctgg ccatcgacca gcaaagggtt aatgactttg ccgcagtcat caaccgcgac
     3241 gtaacgcagg aactttgtct cgccggtgtc cttatcgatc tcgacgacgc agatatgcgt
     3301 gccgaaagga aaggtaaagt ttttcggctc gaagaaataa gttgcggaca a
//
LOCUS       DATILV010000050        11411 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3079353, whole genome shotgun sequence.
ACCESSION   DATILV010000050 DATILV010000000
VERSION     DATILV010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 11411)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11411)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11411
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3079353"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..469)
                     /locus_tag="VLJ17_01075"
     CDS             complement(<1..469)
                     /locus_tag="VLJ17_01075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012329566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HSV21600.1"
                     /translation="MSHQGIGAPLPRKEDDRYLRGEGQFVGDFYLPHMHDVVFLRSPV
                     AHARIKSIRIPPALRRHVFIAIDLAGVKAIRADTALVGFKSSVQPVLATEKVRHVGEP
                     IAMCVAPTTAEAEDIAAMIEVDFDALPPVHEMMAARRDEPSLVHESWGDNIFLT"
     gene            768..1913
                     /locus_tag="VLJ17_01080"
     CDS             768..1913
                     /locus_tag="VLJ17_01080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV21601.1"
                     /translation="MGRIFTMACALSSVLFAGSAIAQDTLKIGVTQPLTGAFAASGNY
                     VAQGAKIAEGDLNKAGGVLGKKIELIIEDNKSNPTEAVATAEKLIQKDKVPVMMGAWS
                     STLTLAVMPKLMEYEVPMLVETSSSGKITTSGNPWIFRISPTSEMEAKAFAPLLKSLG
                     IKKADLLSTNNDFGLGAAQEFSAMLKEAGVEIGARETMDPKAVDFSAQLAKIKASGGD
                     TLFVTTAVEQITLVLKQAKEQQLKARIITTGGSNAPDQLIEQAGEAANGSMHLVFFTP
                     WFPEAVKNGDLASKFVSDWKARGYNIGGLTEGFRGYDGILTIAAAIKSAGKAEPAAIQ
                     KALWNVKVAGVGGDIAFIKQGPAGQESAQNVPSVYLIKIENGKVTRM"
     gene            2039..2911
                     /locus_tag="VLJ17_01085"
     CDS             2039..2911
                     /locus_tag="VLJ17_01085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003525448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSV21602.1"
                     /translation="MDPFLQHCLNALMLGGTYALLGIGLTLIFGIMRVVNFTHGELYA
                     FGAYMMYALVMRSGVDFFLALALATILGGVLGAAIEFVLLRQLGTSDIDVTMLVMIGA
                     WIALQNAEQLAWTGVAQSIASPFPADPIVVGGLSVSWNRVFVFAVAIVLISATYFLVN
                     RTKLGLAMRATFQDRETAALMGVRIERIHTIVFALGSSLAAAAGALLGPVFLVTPTMG
                     DLAAAKAFAIVILGGLGNLIGATVGGFILSFAEEIGVGYISSGYRDAMGFLLIILILL
                     VRPTGLFAQKERTS"
     gene            2908..3951
                     /locus_tag="VLJ17_01090"
     CDS             2908..3951
                     /locus_tag="VLJ17_01090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSV21603.1"
                     /translation="MTRWKSVLIIGFLASIPVWVTSFYFLHVLITTGIFIIAAMSLNL
                     LLGFTGQLSLGHVAFFGIGAYASALLSLGFEVHITDNLALGVRPKPVWLAMMFGTLAA
                     GLCGLALGKIAFKVRGAYFVIVSISFAEVVHLVAVNWVDLTQGPMALNNIPPLKLGTP
                     ELFELSFLRKPAYFYLVLATAIACYVIIRRLVNSHGGRAMIALRENEPLAMSVGIDVT
                     RYLVLATVVSAAMAGSAGALYAHYVRIVDPDIFLFIYTVTMVIMVVTGGKGTLAGPIV
                     GGTIFGLLPELLRALAIKPEMQWIAFGALIILVVFLLPRGIVPALDNWWKSRSRRLPN
                     AKSPVQAASEAPQ"
     gene            3951..4739
                     /locus_tag="VLJ17_01095"
     CDS             3951..4739
                     /locus_tag="VLJ17_01095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV21604.1"
                     /translation="MPSAPIVLQVIGLSVRFGGLMAIDNVTFEVRDGEVLSLIGPNGA
                     GKTSVFNAITGFLRPQAGDVLYERRPLSDLPPHKIAAMGVVRTFQKTSLFSGQTVFNN
                     VLMGLHLSAKQRLLAIILGLSSVARDERKLNVSAWDILRFIGLESRADELSAALSYGE
                     QRLLEVAIALAARPKLLLLDEPVSGMNPAEKARFMKTLDKIRHAGTTILLVEHDMRTV
                     MGASDRIICLNHGRIIADGTPGEIQSHPEVIRAYLGERAARAGN"
     gene            4726..5436
                     /locus_tag="VLJ17_01100"
     CDS             4726..5436
                     /locus_tag="VLJ17_01100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015241772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV21605.1"
                     /translation="MLEIEGLECRYGAIAAVQGLSIAVRRAELVVLIGANGAGKTTTL
                     KAISGLMAPTVGSISFEGQDVTGAPSHRMLALGVAHCPEGRRVFPYLTVGENLRMGCY
                     LRSDGTGIKRDMSRIFDRFPILRERFDQAAGTLSGGEQQMLAIGRALMSRPKLLLLDE
                     PSLGLAPSLVAQTFEVVRQIRAEGVTVIMVEQNAFAALALCDRAYVLEQGCIIKTGTG
                     AELLSDPDVKSAYLGIGN"
     gene            5466..6743
                     /locus_tag="VLJ17_01105"
     CDS             5466..6743
                     /locus_tag="VLJ17_01105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008140628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_function: GO:0019213 - deacetylase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase/deacetylase family
                     metallohydrolase"
                     /protein_id="HSV21606.1"
                     /translation="MSATPVYDLILQGGHVMCPASGIDGIMDVAVAGGKIARVSEGIL
                     PSAAKQVIDVRGKLVLPGMIDTHAHIYRYVTGRFGLDADMVGVASGVTTLIDQGGASC
                     MTFPGFRHFVAEKAASRCFAFISAYLVGGLEGHYYPALYSPSGVDVPATVAAAKANRD
                     LVKGVKAHAEIGGFARWGTAVMEMASEIGREADLPVYVHFGQLWALPSEGANGVDADT
                     IVERTVRLLRPGDILAHPFTRHPGGFVDKNGKVHPIIQAAIDMGLKIDVGHGSHFSYR
                     LARKALDAGIVPHTLGADMHGYNTFIPSPPGTPEAHPDEENHPFAGQARFSLAQAMSS
                     MLALGLTLQQVVPMATSNAARMVGLADEIGALKPGFGADVSILNDLRGRFRLQDNENT
                     QIIAERLLEPVFCLRAGKRFEATAPILPRAVAA"
     gene            complement(6912..7148)
                     /locus_tag="VLJ17_01110"
     CDS             complement(6912..7148)
                     /locus_tag="VLJ17_01110"
                     /inference="COORDINATES: protein motif:HMM:NF024934.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSV21607.1"
                     /translation="MTAPQRMACFLIEMSRRLGGHPIVELPMPRQDIADYLGLSIETV
                     SRTFARFEANGLISLPTSRHIVLRDVGVLQRMHE"
     gene            7164..7583
                     /locus_tag="VLJ17_01115"
     CDS             7164..7583
                     /locus_tag="VLJ17_01115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21608.1"
                     /translation="MLLNAPQFARAGLPQLPNCFIIGGPDNRIASGNQYADIVDCFSA
                     EFPPFAGVKSKNVAAQPERFDFPAPLSQNLVAPHGAPDYLVYATGWFAFAEEFCIRTE
                     CPLFTAEWLNRFFNALKRGSNCDAIWCCIWAGINRLP"
     gene            complement(8006..8662)
                     /locus_tag="VLJ17_01120"
     CDS             complement(8006..8662)
                     /locus_tag="VLJ17_01120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV21609.1"
                     /translation="MNGKSEGVVYVLDDDAYVRQGLDSLLQSVGLEVETFASVKAFLA
                     CERPDVAGCLVLDIRMPGLSGLEFQNELIKLNIDIPIIFITGHGDIPMTVQAMKAGAI
                     EFLTKPIREQDLLHAVRIALDRDRGRRIKAKAITNMRARFESLTSRERDVVAWVTTGK
                     MNKQVAAEIGISEVAVKVHRHNAMKKLGAKSLADLVRMADAVGIGHTSDASGEGHNLV
                     "
     gene            8860..9033
                     /locus_tag="VLJ17_01125"
     CDS             8860..9033
                     /locus_tag="VLJ17_01125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21610.1"
                     /translation="MDKATLVQAEASCRTIILVECFLDSNHIKEPPKDAVFPSKRFLP
                     AIQHMIGFKESLN"
     gene            complement(9306..9962)
                     /locus_tag="VLJ17_01130"
     CDS             complement(9306..9962)
                     /locus_tag="VLJ17_01130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012384941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21611.1"
                     /translation="MPEEELTRATLKTPKAAAGAGIAFSVLLIIAFGLLRISAPADPL
                     EPGAWLKTSVNTVTLALNMVPFAGIAFLWFIGVLRDRLGRREDHFFATVFFGSGLLFL
                     ATLFVAAAVIGAIILAFAEQQPNELINSTSFHFARAVAYLIVNIYMIKIAGVFMITTS
                     TVAIYTELAPRWIALLGYGLALIIVFGGYYIEWSFIVFPLWVLLISTYILIDDLRRSP
                     "
     gene            complement(10047..10265)
                     /locus_tag="VLJ17_01135"
     CDS             complement(10047..10265)
                     /locus_tag="VLJ17_01135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21612.1"
                     /translation="MRWFYLAVIITFAVATIIFAAQNFQIVTMSFLGISARTPLALLV
                     VVVYLLGTVTGSSLLALLRRSVERARHA"
     gene            complement(10328..>11411)
                     /locus_tag="VLJ17_01140"
     CDS             complement(10328..>11411)
                     /locus_tag="VLJ17_01140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013946965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSV21613.1"
                     /translation="NQDPQLNRVFSTFSATNPSIYLDIDRDKVQVLGVQLSAVFQALQ
                     TSLGGYFVNNFNLYGRTWQVQVQAEASDRSRIDDIYRINVRNTEGKMIQLRSLVEVRV
                     VVGPPALIRYNNLRAVTVQGSPAAGVSSGQALKAMEEVAEKTLPAGYEGAWTDTAFQE
                     KRAEGKTAMILGFAMLFAYLFLVGLYESWTIPVPVLLSVSVGVLGSFIAIVIARLTLD
                     LYGQIGMVVLIGLAAKNGILIVEFAKEKREHGIPLLEAATEGARQRFRPVMMTSFAFI
                     LGLLPLVIATGASQLARRDVGTPVFGGMILASFIGIFVIPPLYVSFQAIRERLRPAAR
                     PRENLPGRPAPTDHGSHGISPRSAAE"
BASE COUNT         2293 a         3351 c         3324 g         2443 t
ORIGIN      
        1 tggtcaggaa gatgttgtct ccccacgact catgaacgag gctgggctcg tcccggcgtg
       61 ccgccatcat ctcgtggact ggcggcaagg cgtcgaaatc gacctcgatc atcgccgcaa
      121 tgtcctcggc ttcggcggtg gtcggcgcga cgcacatggc aatcggctcg ccgacatggc
      181 gtaccttttc ggtcgcaagc accggctgca ccgacgattt gaagccgacg agcgctgtat
      241 cggctcggat cgccttcacg ccggcaagat caatagcaat gaagacgtgc cggcgcaggg
      301 ctggcggaat acggatcgat ttgatccggg catgggcaac cgggctgcgc aggaacacga
      361 catcgtgcat gtgaggcagg tagaaatcgc cgacgaactg tccttcgcca cgaaggtagc
      421 ggtcgtcttc cttgcgcggc agaggggctc cgattccttg atggctcacg ttcgatgacc
      481 ctcgggcgat tttccgattc ggtttaacgc gcttcgtgcg atttcatttc caaaaatggt
      541 acgcggcacg gcgattccga ccaacgacaa tcgttcggta cgcaaagccc atgtgagcga
      601 atcgcctgtt ttttgtgcag gcatttcatc tgcccattgt ctaccctgtt aatctataag
      661 tacgcttgca agtccggttt tgcgctctcg cgccgcgttt gagtcgtcac aaatcgttgg
      721 cgagaccggg tgcttgtgct gaattcggag taaacggagg cagaactatg ggcaggatct
      781 ttaccatggc ttgtgcgctg agctcggtat tattcgccgg ctctgcgatt gcccaggaca
      841 cgctcaagat tggggtcacg cagccgctca ctggcgcttt tgcggcatcc ggcaattatg
      901 tcgcgcaagg cgccaagatt gccgagggcg acctcaacaa agctggcggc gtgcttggta
      961 agaaaatcga gctgatcatc gaggacaaca agtccaatcc aacggaggca gtcgccaccg
     1021 cggaaaagct catccagaag gataaggtcc cggtgatgat gggcgcctgg agttcgaccc
     1081 tcaccctggc ggtaatgcca aaactcatgg aatacgaggt cccgatgttg gtcgagacgt
     1141 cgtcatcggg caagatcacg acctccggca acccgtggat tttccgcatc agcccgacct
     1201 cggaaatgga ggcgaaggct ttcgcgcctc tgctcaagtc cctcggcatc aaaaaggcgg
     1261 acctcctgag caccaacaac gattttgggc ttggcgctgc gcaagaattc tcggcgatgc
     1321 tcaaggaggc gggcgtcgag atcggcgccc gggagacgat ggaccccaag gcggtggatt
     1381 tctcggcgca gctcgcgaag atcaaggctt ctggcggcga cacgttgttc gtcaccacgg
     1441 cggtcgaaca gatcacgctc gttctcaagc aggccaagga acagcagctc aaggcccgca
     1501 tcatcacgac cggcggctcc aatgctcccg atcagttaat tgaacaggcc ggcgaagccg
     1561 ccaatggctc gatgcatctc gtcttcttca caccgtggtt tcccgaggcg gtaaagaacg
     1621 gcgatctcgc atcgaagttc gtgagtgatt ggaaggcgcg cggctacaac atcggcggcc
     1681 tgaccgaggg tttccgtggc tatgacggga tattgaccat cgctgccgcc atcaaatcgg
     1741 ccgggaaagc cgaaccggcg gctattcaga aggcgctgtg gaacgtgaag gtcgccgggg
     1801 tcggcggcga catcgccttt atcaagcaag gtccggccgg ccaggagagc gcccaaaacg
     1861 tgccaagcgt ttatctgatc aagatcgaga acggcaaagt cacgaggatg taggtcgccg
     1921 ggcgaaccaa gggctgcggt gtttcgtggg gcgggcgcgc catcgctgat cgcaacgagg
     1981 cggtgtatgc tcggcgtcgg ttgttctgcc cgctgactgt tgcctcggaa tccgcgcttt
     2041 ggacccattc cttcagcact gcctcaatgc actcatgctg gggggcacct atgcgctcct
     2101 gggcatcggc ctcaccctga ttttcggcat catgcgcgtc gtgaacttca ctcacggcga
     2161 gctctacgcc ttcggcgcgt acatgatgta cgcgttagtc atgcggtcag gcgtcgactt
     2221 cttcttggcc ctcgcgctcg caacgatcct cggtggcgtt ctcggtgccg cgattgaatt
     2281 cgtgctgctg cggcaattgg ggacctcaga catcgacgtc accatgctgg tcatgatcgg
     2341 tgcgtggatt gcgcttcaaa acgccgaaca actggcttgg acaggcgttg cccaatcgat
     2401 tgcgagcccg tttcctgccg atccgatcgt ggtcggtggg ctgtcggtat cttggaatcg
     2461 cgtgtttgtt ttcgcggtgg cgatcgtatt gatttcggcg acatattttc tcgtcaaccg
     2521 caccaagctt ggcttggcta tgcgagcaac gttccaggac cgcgaaacag ctgccctgat
     2581 gggcgtacgg atcgaacgca tccacaccat tgtgttcgca ctgggctcca gccttgcggc
     2641 cgcggccggc gcgctgttgg ggccggtatt tcttgtcact ccgactatgg gtgatctcgc
     2701 tgccgccaag gccttcgcca tcgtgatcct cggcggcctg ggcaatctca tcggtgcgac
     2761 cgttgggggc ttcattcttt ccttcgccga ggagattggt gtcggctaca tctcatccgg
     2821 ctatcgggat gcgatgggct tcctgctcat catcctgata ttgctggttc gtccgaccgg
     2881 attgtttgcc cagaaggagc ggaccagttg acgcgctgga aatctgtgct gatcattgga
     2941 tttctggcat ccattccggt gtgggtcacg agtttctatt tcctccacgt ccttatcacg
     3001 accggaatat tcatcattgc cgccatgagc ttgaatctcc tgctcggctt caccggccag
     3061 ctctcgctcg gccatgtcgc cttttttggt atcggcgcct atgcgagcgc gctgctttcg
     3121 ctcggcttcg aagttcacat caccgacaac ttggcgctcg gcgttaggcc gaagccggtt
     3181 tggctcgcta tgatgtttgg tacgctcgct gccggactct gcggcctcgc gctcggcaag
     3241 atcgcattca aggtgcgcgg cgcttatttt gtgatcgtgt cgatcagctt tgccgaggtc
     3301 gtgcacctcg tcgcggtcaa ttgggtggac cttacgcaag ggccgatggc gctcaacaat
     3361 atcccgcccc tgaaactggg tacgcccgaa ttgttcgaac tgtcgtttct gcgcaagcct
     3421 gcctatttct atctggtcct tgctacagcg attgcctgct acgtgatcat tcgccgtctc
     3481 gtgaactcac atggcggccg cgccatgatc gcgttgcgcg agaacgagcc gctggcgatg
     3541 tcggtcggaa ttgacgtcac ccgctatctc gtcctggcga cggtcgtttc tgccgccatg
     3601 gccggctccg ccggcgcgct ttatgcgcac tacgtgcgta tcgtcgatcc ggatatcttt
     3661 ctcttcatct acaccgtgac aatggtgatc atggtggtga ccggcggcaa gggcacgctc
     3721 gccggtccga tcgttggcgg caccattttc ggtctgttgc ccgagctgct gcgcgcgctc
     3781 gccatcaagc cggaaatgca gtggattgcg tttggtgcgc tcataatctt ggtggtgttt
     3841 ctgttgccgc ggggaatcgt accggcgctc gacaattggt ggaaaagccg tagcaggcgc
     3901 ttgccaaatg ccaagtcgcc cgtgcaggca gcgtcggagg cgccacagtg atgccttctg
     3961 cgccgattgt gcttcaggtc atcgggcttt ccgtcaggtt cggcggactt atggcgatcg
     4021 acaacgtgac atttgaggtg cgagacggcg aagtgctctc gctgatcggc cctaacggcg
     4081 ccggcaagac gtcggtgttc aatgccatca ctggattttt gcgtccacaa gccggcgacg
     4141 tcctgtacga gcggcgcccc ttatccgatc tgccgcccca taaaatcgcc gccatgggtg
     4201 tcgtgcgcac cttccagaaa accagcctgt ttagcggcca gaccgtcttc aacaacgtgc
     4261 tcatgggcct gcatctcagc gcgaagcagc ggctgctcgc catcattctc ggcttgtcct
     4321 cggtggcgcg agatgaacgc aagctcaacg tctcagcgtg ggacatcctg cggttcatcg
     4381 gcttggagtc tcgcgccgat gaactcagcg ccgccctgtc gtacggcgag caacgcttgc
     4441 tcgaggtagc gattgcgctc gccgcccgtc caaagcttct cctcttggat gagccggtat
     4501 cgggcatgaa ccccgccgaa aaggctcgtt tcatgaagac cttggacaaa attcgccatg
     4561 ccggcaccac catcctcttg gtcgagcacg acatgcgcac cgtcatgggc gcatctgatc
     4621 ggatcatctg cctcaatcac gggcgcatca ttgctgacgg cacgccgggc gagatccagt
     4681 cacaccccga agtcattcgc gcttaccttg gagagagggc tgcacgtgct ggaaattgag
     4741 gggctggaat gccgatacgg tgcgatcgcg gcggtccagg gactctcgat cgcggtacgc
     4801 cgggccgagc ttgttgtcct gattggtgcc aacggagccg gcaagacgac gactttgaag
     4861 gcaatctcgg gattgatggc tcccaccgtc gggagcatct ctttcgaggg gcaggacgtg
     4921 accggcgcac cgagtcaccg catgcttgcg ctcggcgtcg cccattgtcc cgagggaagg
     4981 cgtgttttcc cctatctgac tgtaggtgaa aatctgcgaa tgggctgtta tcttcgctcg
     5041 gatgggaccg gcatcaaacg agacatgtca cgcatattcg atcgtttccc gatcctgcgg
     5101 gaacgtttcg accaggcggc cggcacgctg tcaggaggcg agcagcagat gttggccatc
     5161 ggccgagcat tgatgtcgcg ccctaaactc cttttgctcg atgagccatc gctgggtttg
     5221 gcgccaagcc tcgtcgccca aacattcgaa gtcgtccgcc agatccgcgc agaaggcgtg
     5281 acagtcatca tggtcgagca aaacgccttc gcggctctcg cgctatgcga tcgcgcctac
     5341 gtgctggagc aagggtgcat catcaaaacc gggacgggcg ccgaactgct gagcgacccg
     5401 gacgtcaaga gcgcttatct cggaattgga aattaggacc tatttgtccg acaggaggta
     5461 aagccatgag tgcaacgccc gtctacgatc tcatcctgca aggcggacac gtgatgtgtc
     5521 ccgcctccgg catcgacggc atcatggacg ttgcggtcgc cggcggaaag atcgctcgcg
     5581 tgagcgaagg cattctgcct tcagccgcga agcaggtcat cgatgttcgc ggcaaactgg
     5641 tgctgccggg gatgatcgac acccacgcgc acatctatcg ctatgtcacc gggcgctttg
     5701 ggctcgatgc cgatatggtc ggcgtcgcga gcggagtgac cactctgatt gaccagggcg
     5761 gcgcctcatg tatgacattc ccggggttcc gtcacttcgt ggcggagaag gcggcaagcc
     5821 gatgcttcgc cttcatctct gcctatttgg tcggtggcct cgaaggccat tactatccgg
     5881 cactgtattc cccgagcggc gtcgacgtgc cggcgaccgt cgctgctgcc aaggccaacc
     5941 gcgatctcgt taaaggtgtg aaggcacatg ccgagattgg tggctttgcg cgctggggga
     6001 cggcggtcat ggagatggca agcgagatcg gccgcgaagc cgacctgccg gtgtacgttc
     6061 attttggtca gttgtgggca ttgccgtcgg aaggagcaaa cggggtggat gctgacacca
     6121 tcgtcgagcg cacagtccgc ctattgcgcc ccggcgacat cctcgcccat ccgttcacgc
     6181 ggcatccggg cggtttcgtc gacaagaacg gtaaagtaca cccaatcatc caagccgcaa
     6241 tcgatatggg gctcaagatc gatgtcgggc acggcagcca cttctcttac cggcttgcga
     6301 gaaaggcatt ggacgccggg atcgtaccgc acacactggg tgccgacatg cacggctaca
     6361 acaccttcat tccgtcgccg ccggggacgc ccgaagcgca tccggacgag gagaaccatc
     6421 cattcgctgg gcaggcccgt ttcagccttg ctcaggcgat gagctctatg cttgccctcg
     6481 gtctgacgtt gcagcaggtc gtgccgatgg cgaccagcaa tgcggcacga atggtgggac
     6541 tggccgacga gatcggcgct ttgaaaccgg gctttggcgc cgatgtctca atactcaacg
     6601 atctccgcgg ccgattcaga ctccaggaca acgagaacac gcagatcatc gccgagcgct
     6661 tgctggagcc tgtgttttgt ctccgtgccg gcaagcggtt cgaggccacg gcgcctatcc
     6721 tgccacgcgc ggtcgcggcg tagcgacgct gcaaccgcca gcgctccgag atcagccggc
     6781 ctattcgtcg atggtgtgat cgcgcgcacc atgagagcgc tggtcggcga tgctttgtaa
     6841 gttattaaaa tgtctgtggc tggccggctc tctgggagcc ggccgcgctt ctttcgttat
     6901 cgaaaatttt gctattcgtg cattcgttgc agcacaccca catcacgcag cacgatatgg
     6961 cgtgatgtcg gcaatgagat gaggccattt gcctcgaatc gcgcaaaggt gcgcgatact
     7021 gtctcaatgg atagtcccaa atagtccgca atgtcttgtc gcggcatcgg tagctccaca
     7081 atagggtgcc cacctaaacg tcgcgacatc tcaatcaaaa aacacgccat acgctgcgga
     7141 gcagtcatcg caagcaatag cgcatgctgc tgaacgcgcc gcaattcgcg cgcgctggcc
     7201 tcccacagct cccgaattgt ttcataatcg gcggccccga caaccgtatt gcgtcgggca
     7261 atcaatacgc agacatcgtc gattgcttca gcgcagaatt cccgcccttt gccggagtca
     7321 aatccaaaaa cgtcgccgcg cagcctgaac gcttcgattt tcctgcgccc ctctcccaga
     7381 accttgtagc tccgcacggc gcccctgatt atcttgtata tgcaaccggc tggttcgcct
     7441 tcgctgaaga gttctgcatt cggactgaat gtcctctctt taccgcggaa tggctgaaca
     7501 gatttttcaa tgcgctcaaa cgcggttcga actgtgatgc catatggtgc tgcatatggg
     7561 cgggcatcaa ccgtctgcct tagcatggct cgtcctctcc gttatcaccg gccgcaaatc
     7621 gtcgccatga ggacagcatt cggcaatttg tgaaatgtag cctcgtagcg cctgtttgac
     7681 gctgatttcg cgatcagtag tcgttccgtt tttttgtgag cagcgtcgaa cgataacgct
     7741 gacaaatatc aattcgtatc gcttcctttg gatacgcatt atcgccttta ggaaagtcgc
     7801 tattaacctt cgttaaggag aaattgccgt tgcgcccgcc ctcacgtctt gaagtctcaa
     7861 cgccggacag tcaattgagg gcggtgcggg gcttgcatcc tcggcatggg gatgacccgg
     7921 gttgagcaat tttttcacga ccgggcacgg attcagatcg acttgaattc aacaagccgc
     7981 tggagcggat cgatcaataa tccgatcaaa ccaagttgtg gccttcgccg gatgcgtcgc
     8041 ttgtatgccc aattcccact gcatcggcca ttcgcaccaa gtctgccagc gatttcgcgc
     8101 ccaatttctt catcgcattg tgacgatgca cctttacggc gacctcgctg atgccaattt
     8161 cggcggcaac ctgcttattc attttgcccg ttgtcaccca tgctacgaca tcgcgctcac
     8221 gcgacgtgag ggattcgaag cgggcccgca tgttggtgat ggcttttgcc ttaatgcgac
     8281 gaccgcgatc gcggtcgagc gcaattcgaa ctgcgtgcaa aagatcctgc tcgcgaatcg
     8341 gctttgtaag gaattcgatg gccccggcct tcatcgcctg gacagtcatc gggatatcgc
     8401 cgtgtccggt aataaagatg atgggaatat cgatgttcaa tttgatgagc tcgttttgaa
     8461 actccagtcc gctcagccct ggcatccgga tatcaagcac aagacagcca gcaacgtctg
     8521 ggcgttcgca tgcaaggaat gccttgactg aggcgaaggt ttcaacctca aggcctacgg
     8581 actggagcag actgtcaagc ccctgccgta cgtaggcatc gtcgtcaaga acgtaaacaa
     8641 caccctccga cttcccgttc acgatccacc ctccgactga tcactcaatc gagcagccgt
     8701 agattgctcg gcaaagccaa aaacaacgtg cgtttcgggc cccaacttcg cgtcccaagc
     8761 agaacgtcct cccgcgcacc ggtcatgcta gcgacaatcg tgtcttttgc tcatcgagat
     8821 attctacctc gctggcagtc acattgatta gggacagaag tggacaaagc gacgcttgtc
     8881 caagcggagg cgagctgccg caccatcata ctagtggagt gcttccttga ttcgaatcac
     8941 atcaaagagc caccaaaaga tgcagttttt ccctcaaaac gcttccttcc tgccatccag
     9001 catatgatcg gtttcaagga atcgctgaac tagcctcaat ttgcgcgcgc tccggccgct
     9061 tccccgggtg attgtacaga cagcccgatg acctgacaat gacatcgaag gtcatgacat
     9121 cgatggcagc gcagcggcag cagcttggcg gtttggaggc aatgcgacgg gcgggctgcg
     9181 gcgtggcacg tcgcggagcg tatcaggggt acgccgtgtt gcaccttctc cggctcggtc
     9241 ggggagtcga gatcggcgat gattcgggcc gggagcctgc gcggccggca catcaatctt
     9301 tgaggtcacg gcgaacgccg caggtcgtcg atcagaatgt acgtgctgat caaaagaacc
     9361 cacaaaggaa agacgatgaa actccactcg atatagtagc cgccgaatac gatgatcagc
     9421 gccaatccat aaccgagaag cgcaatccac cgcggcgcca attcggtgta gatcgcgacg
     9481 gttgaagtcg tgatcatgaa tacgcccgcg atcttgatca tgtagatgtt gacaatcaga
     9541 taggcgacgg cgcgggcgaa atgaaagctg gtggaattaa tcagttcgtt gggctgctgc
     9601 tccgcgaagg ccagaataat tgcgccaatc actgccgcgg cgacaaacag cgttgccaga
     9661 aacagaagcc cactgccaaa gaaaacggtg gcaaaaaagt gatcttcacg tcgacccagc
     9721 cggtcacgca agaccccgat gaaccacagg aaggcaattc cggcgaatgg caccatgttg
     9781 agtgccagcg tgacggtgtt gacgctggtt ttgagccacg cccccggttc gagcggatct
     9841 gccggtgcgg aaatccgaag cagtccaaac gcgattataa gcagtaccga aaaagcaatg
     9901 ccggcacccg cggcagcctt tggtgtcttc agggttgccc gtgtcaactc ctcttcgggc
     9961 atcactgccg cctttccttg ctcctgccta tcctgacaag gcaagtatcc ggaaactcat
    10021 ttcacactcg ataatctctt ctgccgtcat gcatgtcttg ctctttcaac ggagcgacgc
    10081 agcagtgcca gcaggctgct gcccgtcacg gtgccaagca ggtagacgac aacaacaagg
    10141 agcgcgagtg gcgtccgcgc actgatgcca aggaatgaca tggtgacgat ctgaaagttc
    10201 tgcgcagcga aaataatggt ggcgaccgcg aacgtgataa tcaccgccag ataaaaccac
    10261 cgcatcgtca gctcccccta aaaggaattt tgagactgca atttgccatc ccggagtgga
    10321 tagcatgtca ctcggcggca cttcgcggcg aaatcccatg ggagccatgg tcggtgggcg
    10381 cgggacggcc gggcaaattt tcccttgggc gcgcagctgg gcgcagccgc tcccggattg
    10441 cctggaagga gacgtataat ggcgggatca cgaagatgcc gatgaaggaa gcgagaatca
    10501 tgccgccgaa caccggtgtg ccgacgtcgc gtcgcgccaa ctgtgacgca ccggtagcga
    10561 tcaccagcgg caacaggccg aggatgaagg cgaatgacgt catcatcacg ggtcggaacc
    10621 gctgtcgcgc gccttccgtc gcggcttcga gcagagggat gccgtgctcc cgcttctcct
    10681 ttgcaaactc gacgatgaga atcccgttct tagcggctag cccgatcagc accaccatgc
    10741 cgatctggcc atagaggtcc agtgtcagac gcgctatcac gatggcgatg aatgacccca
    10801 acacgccgac cgaaaccgac aacaataccg gcaccgggat ggtccagctc tcataaagtc
    10861 ccactagaaa caggtacgca aacagcatcg cgaaaccgag aatcatggcg gtcttgcctt
    10921 cggctcgctt ctcctggaag gcagtgtcgg tccatgcgcc ttcgtaaccg gccggaaggg
    10981 ttttttccgc gacttcttcc attgccttca gggcttggcc ggaggaaact cccgccgccg
    11041 ggctgccctg aaccgtaacg gcgcgcagat tgttgtagcg gatcagggcg gggggcccaa
    11101 ccaccactcg gacttccacc aggctgcgca gctgaatcat cttgccttct gtatttcgca
    11161 cattgatgcg ataaatgtcg tcgatgcggg accggtcgct ggcctcggcc tggacctgaa
    11221 cctgccaggt gcggccatac aagttgaaat tgttgacgaa gtagccgccg agtgaggtct
    11281 gcagcgcctg gaagacagcg ctcaactgca cgccgaggac ttgcaccttg tcgcggtcga
    11341 tgtcgagata gattgatggg ttggtggctg aaaacgtgga gaatacgcgg ttcaactgcg
    11401 ggtcctgatt g
//
LOCUS       DATILV010000051         1687 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3079674, whole genome shotgun sequence.
ACCESSION   DATILV010000051 DATILV010000000
VERSION     DATILV010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1687
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3079674"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..337)
                     /locus_tag="VLJ17_01145"
     CDS             complement(<1..337)
                     /locus_tag="VLJ17_01145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21614.1"
                     /translation="MLALSCCSMITVPSASAAASRGRTWIPGVRSPTGAEHKHPKHFL
                     FFSPSPQSQKAADAFLQRLGERQADRDTAVSDQTVQAQLTAIAKWGQAPNSSETLKQV
                     RHPVLIANGD"
     gene            complement(636..1583)
                     /locus_tag="VLJ17_01150"
     CDS             complement(636..1583)
                     /locus_tag="VLJ17_01150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003539108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase family protein"
                     /protein_id="HSV21615.1"
                     /translation="MKIAILDDYQNIALKLADWSTLARRAEITVFNDHIADPAAIIDR
                     LLPFDVVCVMRERTPLPRDIIQRLPRLKLIASTGPGNASIDMAAAAEHGVSVTATGYR
                     STPTIELTWALILAGARHIVPESKAVRAGGWQTTVGQELEGKVLGVVGLGRIGAQVAR
                     IGLAFRMKIIAWSQNMTPEIAGAAGATMVPKSELFRQADIVTVHLVLSKRTRGLIGAA
                     ELEVMKPTARLINTSRGPIVDEAALIAALQSHSIAGAALDVFDQEPLPAGHPFRSLDN
                     VLATPHIGYVGEDLYRTFYHDVVASISAWLDERATEEPQ"
BASE COUNT          323 a          547 c          498 g          319 t
ORIGIN      
        1 cgtcaccatt ggcgatcagg actgggtgcc ggacctgctt cagcgtctcg ctcgagttcg
       61 gcgcctggcc ccatttggcg attgccgtaa gctgggcctg gacggtctga tcgctgacgg
      121 ccgtgtcgcg atcggcctga cgctccccga gacgctgcag gaacgcatcc gccgccttct
      181 ggctttgagg ggaaggggag aagaacagga aatgcttcgg atgcttgtgt tcggcgccag
      241 tcggcgatct gacgccaggg atccacgtcc tgccgcggct cgccgccgct gacgccgaag
      301 gtacggtgat catggagcaa cacgacaaag ccagcatcgg cgaaggcctc tgcgaactta
      361 gcgatgccat gctccctcac gcccgcatag ccatgtgcca tcgtaatcgc agggctgggt
      421 agcctggcgc tcgccgggag aaatagccac gcgccaagtt ctatgccgcc atcagccata
      481 aatctgacat cgctgcgggt tgtcatcagg cccttctcct cagatcggct acacgtcgac
      541 cgctcggcct cgtcgcgtga ggttactcag cgcgttgctc accaatgacg ccgccccgac
      601 ggccgattga acgttgatcg gcgatcgcgc cgaaatcatt gcggctcctc ggtcgcccgc
      661 tcgtcaagcc atgccgaaat actggccacg acgtcgtgat agaacgttcg gtaaagatct
      721 tccccgacat atccgatgtg cggcgtcgcc agcacattgt ccaacgaccg gaacggatgc
      781 cctgccggca gcggttcctg gtcaaatacg tcaagcgcag ctcccgcgat cgagtgcgac
      841 tgcaaagccg cgattagggc agcttcatcc acgatcggac cgcgagacgt attgatcaat
      901 ctggccgtcg gcttcatgac ctcgagctcg gctgcgccaa tgaggcctcg cgtgcgcttg
      961 ctcagaacga ggtggaccgt cacgatgtcg gcttgacgga acagctcgga cttcggaacc
     1021 atcgtcgcgc ctgctgcacc cgcaatctcg ggcgtcatgt tctggctcca ggcaatgatc
     1081 ttcattcgga aggcaagacc gatgcgcgca acctgcgccc caattctccc caagccgacg
     1141 acacccagga ctttgccctc gagttcctga ccgacggtcg tctgccaacc accggcccga
     1201 accgccttgc tctcggggac aatgtgacgc gcccccgcaa gaataagcgc ccaggtcagc
     1261 tcgatcgtcg gtgtcgacct gtatccggtc gccgtcacgc tgactccgtg ctctgccgcc
     1321 gctgccatgt cgatcgaggc attcccgggg cccgtcgagg cgatcaactt gagccgcggg
     1381 aggcgttgga tgatgtcgcg tggtaacggc gtgcgttccc gcatgacaca aacgacatcg
     1441 aaaggaagaa gcctgtcgat aatggccgcc ggatcggcga tatgatcatt aaaaaccgtg
     1501 atttccgccc gccgagcgag agttgaccag tcggccagct tcagcgctat attctgatag
     1561 tcatcgagga tggcgatctt cacttggtac tcctttcagg acagcgccga taactgcgaa
     1621 ccgagcaccg cagctggtcg ggcggcccga ggtcggcccg aggcctcatg aacctgcctc
     1681 gacaatg
//
LOCUS       DATILV010000052         2381 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2057597, whole genome shotgun sequence.
ACCESSION   DATILV010000052 DATILV010000000
VERSION     DATILV010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2381)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2381)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2381
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2057597"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1391..1846)
                     /locus_tag="VLJ17_01155"
     CDS             complement(1391..1846)
                     /locus_tag="VLJ17_01155"
                     /inference="COORDINATES: protein motif:HMM:NF014608.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HSV21616.1"
                     /translation="MVVEETGEGNFQVEVLAGGLRFLADEPVEMGGLGSGPTPYDLLC
                     AALGACTAMTVRMYARRKEWPLRRVRVCVGHARTKEEDPPDGFLREVALEGDLTDEQR
                     SRLIEIAERCPVHASLKQGARVSTQQVGQIIPLADVEGAGQHAQDMTVD"
     gene            1992..>2381
                     /locus_tag="VLJ17_01160"
     CDS             1992..>2381
                     /locus_tag="VLJ17_01160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21617.1"
                     /translation="MARRSEDLRCVVDVYGAIHRRMEDEKGPSQAADPLPLIVRAQVV
                     DERTAHLESAAAQLHFGLALVKKRLEVFAKQSCDVLNVERRPDGRNGLHVGQIGGRGQ
                     YRRPAEAVTNKKGRLNAGTAHGAGCHQH"
BASE COUNT          464 a          741 c          704 g          472 t
ORIGIN      
        1 gcgctatgcc gaatcgaaca ccggggaggc tcgggccggg cgcagcgctc tccgaaacga
       61 cggcgtcgcg tagaggcctg cacagtgcaa attcatccta gttgtccggc tccagcctgt
      121 gccctaacga aagttatgcc ctgaagttga cgcgcctccg cgtttgcgac aggaacggct
      181 gcttccaaag atcattacga ccggttcgca gcgcccttgt cgtctgctcg gggtcgggga
      241 cggtccgtcg cttgacagcg atgaacggct gctccgccgc aagaccggcc gtcaagtcgt
      301 cgctgatcaa cgggcgcgtt cggccagaag cagccggtcc ccattgacgc ccagtttgcc
      361 cgcaagcagc cactcattca ggtctttggc tgaaaccgtg gtgacgaatg gtgatccgca
      421 agaggctacc gcaggggatc gccgatctag tccggctcaa ccccacttct ctccgaccac
      481 cacttcaccg gatgcggtgt cctcgatcca cactgttccc gtctaggcgt gccgtccatg
      541 acacgctccg ccagagattg aatcagctag gacatcaaag gcaaagcacg tttcgttctt
      601 gactcgataa acgtgactcg ccttcaattt gaccgtgctt tcataaaata cgcgaggaac
      661 cttgggcccc tggtatgcga tccggagcag ataatcgccg ggcgtgagct taaatgaatc
      721 tctcgagcca tctcgtttgg tgtcaaagag caattgcccg tccgctgccg aaatctgttc
      781 gatgcaaaaa gcacaacccc acccgtgctc cagagtcgcc acttgttgat cagaaagtgt
      841 aagtccgcgg taatttgtaa aggtaggaac cgcgcagctt gcaagggcga ttgggaagaa
      901 gatgaccggc aatgtgcaaa cgtaatttgg tcttctcatt ttctgcttcc ctgagaccga
      961 atgagtccgc gggcattgta cggccggttt cgggcagtgc tccgatttgg cgggtagggc
     1021 ccgtcccctc aggcgttgaa cggcggctcc acgacacaca agtcggttac cccttgacgg
     1081 ctgtcttgca ttgatcagcg gccgctcagt ccaatcgcat caatgccggc gaccggccaa
     1141 ctcctgccat tcgtgccctc aataactcac atcgggaatg gccggagtca aggcacagca
     1201 gacatagctc gtgtagcaac cgcagtgaag gaatctgcaa agcgggcgct caaagatcgg
     1261 tgaccctcgc cgcgtaaaga gccgatcgaa cgcccgctgt ttcagaaatc gaattggcgc
     1321 tatctacccg aagtagaccg tggtcctttg cgatttgcgg ttgcaaagcc gacggtcgag
     1381 agttcgcctt ctagtccacc gtcatgtcct gcgcatgctg gccggcaccc tctacgtcgg
     1441 caagggggat gatctggccc acctgttgtg tgctgacgcg cgccccttgc ttgagcgagg
     1501 cgtgaacagg acaacgctcg gcaatttcga ttagtcgcga gcgttgttcg tccgtcagat
     1561 cgccctctag ggcgacctcg cgcaggaagc cgtcaggcgg gtcttcctct tttgtccggg
     1621 cgtggcccac acacactcgc acgcggcgaa gcggccactc ttttcggcgt gcgtacattc
     1681 gtacggtcat tgcggtacac gcgcctaggg cggcacacag gaggtcataa ggcgtgggac
     1741 ccgatcccag cccgcccatc tcgacgggct cgtcggcaag gaagcggagc ccgccagcaa
     1801 gcacctcgac ctggaagttg ccttcgccgg tctcttcgac aaccacttcc cctggttcgc
     1861 ttgcgctgcg aggaggtggc ttcccgacat agcgcgcggc cccaggcgca gatgacctct
     1921 gccgcgtagg ccgagtccgc ggacctagtg agcaggtggt ccgcatcgtc tagggacaca
     1981 aagctcttcg ggtggcgcgc cgctcggaag atctgcgctg cgttgtcgat gtctacggtg
     2041 cgatccatcg gcgcatggag gacgagaagg gcccgtcgca agccgccgat ccgttgccct
     2101 tgatcgtgcg cgcccaggtc gtcgatgaac gaacggcgca tcttgaaagc gcggccgccc
     2161 aacttcactt cggcctcgcc ttggtcaaga agcgtctgga ggtcttcgcc aaacagtctt
     2221 gtgacgtgct gaacgtcgaa aggcgccccg atggtcgtaa tggccttcac gttgggcaga
     2281 tcggcggccg cggccaatac cgccgccccg ccgaggctgt gaccaataag aagggtcggc
     2341 tcaatgctgg cactgcgcat ggcgcgggct gccaccagca c
//
LOCUS       DATILV010000053         2994 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1291326, whole genome shotgun sequence.
ACCESSION   DATILV010000053 DATILV010000000
VERSION     DATILV010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2994)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2994)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2994
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1291326"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..310)
                     /locus_tag="VLJ17_01165"
     CDS             complement(<1..310)
                     /locus_tag="VLJ17_01165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate epimerase"
                     /protein_id="HSV21618.1"
                     /translation="MRDIDLKTTELYGIPSLVLMENAAAAVAQAVTALGGGADESILI
                     LCGPGNNGGDGAAAARLLALSGASVDVVLFGRIKDAKGDAQTNFERAKSYAPQVPIRF
                     F"
     gene            830..>2994
                     /locus_tag="VLJ17_01170"
     CDS             830..>2994
                     /locus_tag="VLJ17_01170"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HSV21619.1"
                     /translation="MSLLAGLLVTNNAKAQNIKQPETARKTALGKYAWDLTAAAEQGR
                     FDSLTERRDETNRAIEILSNSNKNNPVVLSESPAVRDLVASGVARRLVKADVPESLYG
                     KRLFKLNLDALFHDSKTARDLVSNISAILSEIAQFESKVILVVDPIQSLMGPSSAFDG
                     AASAMLRDAIKNGQVQCFGASTDIAFKESVTSDESLAPLFAGVEMQEVADASQQTEDS
                     LKAKDTANPNTEEFVGDKVSADLRELISNRRAPERIKAILQVDNTNSHALQAQLGAYG
                     VKVESRMAQFGTLAVDIPTKAIEKIAATGNYLSLDRRIDGLGHVEATTGDDAMLAQAG
                     NSSLDGSSIGVAVLDSGVSSRVKALSNRIVYSRDFTGEGTTEDPYGHGTFVASMVVSP
                     YGSYGGVAPAANLVNFRVLNSKGTGSMSALLAALDAVMTNRSTYNIRVVNVSLGTAAV
                     DSYKNDPLCRAVRRLVDAGIVVVAAAGNDGKDALHPKLYGRIHSPGNEPSALTVGAAN
                     TFGTDVRSDDGVTTYSSRGPTRSYWTDSAGVKHYDNLIKPDLVSPGNKIVGAAAPNSA
                     LVLLNPTLLVGRTNIRLSGTSVSAPIVAGAVAVLLEANPKLTPNLIKMILMYTAQPLA
                     NFNMLEQGAGELNLEGAVRLAKLVRTDLSSTTRVGAPLLTSAPPTPQSTIAGQTFKWS
                     QGVLFKYDWAKGTELITKYQGIYGLGVLLTDGVILTDSAL"
BASE COUNT          686 a          880 c          828 g          600 t
ORIGIN      
        1 cgaagaacct gatcggcacc tgaggcgcat agctttttgc cctctcgaaa tttgtctgcg
       61 catctccctt tgcatctttg atcctgccga acaagacaac gtcgacgctt gccccggaca
      121 gcgcgagtaa cctcgcggcc gccgcgccat cgccgccgtt atttccaggt ccgcacaaga
      181 tcaggatcga ttcgtccgcc ccgccaccca gtgctgtgac tgcctgcgca actgcggcag
      241 cggcgttttc catcagcact aacgatggaa tgccatagag ctcggttgtc ttcaagtcga
      301 tgtcgcgcat ctgcgccgaa gaaataacag gcttcacagc gggatgataa ggacaatgtc
      361 gcagacgggt caattaaggg cagaaaacaa atcggcgagt aatgccttcc gcgagcaaaa
      421 acaaaacgag gccgcccggg tccttacccc gccgccttgc cgctgctcca gcctatccgt
      481 ctttttggga tactgaggta aagaagtaat gccccgcctt ctccagaaat ttatcctggc
      541 caagccgagg ggctcgttcg aaactgaccg acccttcgtc attctgactt gaccagcctt
      601 cagaatgacc tcggctgact gacccttcca acctcaaaat ctcaaaaaca ggcctaaaaa
      661 tggggatctg agccttggca tacacgttgt aaaggaggag agcgccagca cccccaagtg
      721 ctgcgattga gatgaagtcc aaagcagtct ggtggagttt cgcatgataa gagaaagaag
      781 aacacggaag cggttaggtt ggcggtggct cacggctctc gggctggcga tgtcattact
      841 tgctggactc ctcgtaacca acaacgccaa agcgcagaat attaagcagc ccgaaacggc
      901 tcgcaaaaca gcgctgggca aatacgcctg ggatcttacc gccgcggccg agcagggccg
      961 ctttgattcg ttgactgagc gacgcgacga aaccaaccgc gccattgaaa tactctccaa
     1021 ctccaacaag aacaacccgg ttgtgctgag cgaatccccc gccgtgcgtg atctggtggc
     1081 gtctggtgta gcgcgacggc tcgtcaaagc agatgtgccc gaatcgttat atgggaagcg
     1141 cttattcaaa ttgaatctcg acgccttgtt tcacgattcc aaaactgccc gcgacctcgt
     1201 aagcaatatt tcagcaattc tctccgaaat cgcgcaattc gaatcaaaag tcattctcgt
     1261 cgtcgatccc atccagtctt tgatgggtcc ctcctccgct tttgacggcg ccgcttcggc
     1321 gatgttgcgc gatgcgatca agaacggcca ggtccagtgt ttcggcgctt cgaccgacat
     1381 agccttcaag gaaagcgtta ccagcgatga atcactggcg ccactctttg ccggcgtcga
     1441 gatgcaggaa gttgcagacg caagccagca gactgaggac agcctcaagg ccaaagacac
     1501 tgcgaaccca aacacggaag aattcgtggg cgacaaagtc tcggccgatt tgcgcgaatt
     1561 gatcagtaac cgccgtgctc ctgaacggat aaaggcgata ttgcaggtcg ataataccaa
     1621 cagtcacgcg ttgcaagcgc aacttggagc gtacggcgtc aaggttgaat cccgcatggc
     1681 gcagtttgga acgttggccg tcgatattcc caccaaagcc atcgagaaga tcgccgctac
     1741 cggcaattac ctatcgctcg atcgcagaat agatggcctc ggtcacgtag aagcgaccac
     1801 aggcgatgac gccatgttgg cgcaggcagg aaacagctcc ctggacggca gcagcatcgg
     1861 cgtcgccgtt ctcgactcgg gcgtctcgag cagggttaag gcactttcca atcggatcgt
     1921 gtacagcagg gacttcacag gcgaaggcac caccgaggat ccgtacggtc acgggacttt
     1981 cgtggcctcg atggttgttt cgccctatgg atcgtacggt ggcgtcgccc cggccgcgaa
     2041 cctcgttaat ttccgggtgc tcaattcaaa gggcacgggt tcaatgtcag cgcttcttgc
     2101 agcgctggac gcggtgatga ccaaccgcag cacctacaac attcgcgtag ttaatgtcag
     2161 tctgggaacg gctgcggttg attcctacaa gaacgatccg ctgtgccgcg ctgtccgccg
     2221 tctggttgac gccggtatcg tggtagtggc ggcggccggt aacgacggca aggacgcgct
     2281 gcatccaaag ctatacggac gtattcattc gccgggcaac gaaccttcgg cgctcacggt
     2341 aggtgcggct aacacctttg gtaccgatgt ccgaagcgat gacggtgtca cgacctacag
     2401 ctcgcgggga ccgactcgca gctactggac ggattcggcc ggcgtcaagc actacgacaa
     2461 cctgatcaag ccagacctgg tctctccagg caacaagatc gtcggcgctg cagcgcctaa
     2521 cagcgcgctg gtcctgctca atcctaccct gctcgttggc aggacaaata ttcggctgag
     2581 tggcacttcc gtttcggccc cgatcgttgc gggcgcggtc gcagtgctgt tggaagccaa
     2641 cccgaagctg acgccgaatc tgatcaaaat gatcctgatg tacaccgcgc agccgctggc
     2701 gaacttcaac atgctcgaac agggcgcagg cgaactgaac ctggaaggcg ccgtgcgttt
     2761 ggccaagctg gtgcggacgg atctttcatc gacgaccagg gtcggcgctc cccttctcac
     2821 gtccgctccg ccgacgcctc agagcacgat tgccggccag accttcaaat ggtcgcaggg
     2881 agtgctgttc aaatacgact gggcgaaagg cacggaacta atcaccaagt atcagggaat
     2941 ctacggtctt ggcgtcctgt taaccgacgg agtgatactt actgatagcg cgct
//
LOCUS       DATILV010000054         5831 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3590446, whole genome shotgun sequence.
ACCESSION   DATILV010000054 DATILV010000000
VERSION     DATILV010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5831
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3590446"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..356
                     /locus_tag="VLJ17_01175"
     CDS             <1..356
                     /locus_tag="VLJ17_01175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HSV21620.1"
                     /translation="AKEPTVAIFDHREVQGILGKEVRSAANENMGRIVDVIVDRTGRV
                     RAAIIDFGGFLGVGSRKIAVAWDALRFPSNEDKTERVVLELTRDQVRAASEYKPDKTV
                     VVLGATGSLEALPFP"
     gene            456..1733
                     /locus_tag="VLJ17_01180"
     CDS             456..1733
                     /locus_tag="VLJ17_01180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015687713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV21621.1"
                     /translation="MAAAPQGNAKGPAQNEPVPHPTRRSQRALDWFVFFVADVQTGFG
                     PFVAVYLTGEKWTQVDIGLVLTVGSLVALVGQMPGGVLVDAARSKRLAAGLATTVIAI
                     SALAYAASPVFAVVLAAAVLHAAASCVVGPAMAAISLGLVGHAAIGERLGRNARFAAI
                     GNGLAAAAMGACGYLLSARAVFFVTAILVAPALLALRLISSREIDPERAHGGPRELRA
                     DVPPNKLAGLKRTRPLLIFAGCVMLFHLANAAMLPLMGSVLTTRSSQWPTVLIAACIV
                     GPQLFVAILSPWVGRKSRTWGCRPLLLIAFAALLVRGLFFAAVANPYLLVAVQLLDGV
                     AAAVLAVTVPLIIADLTHGTGHFNLAQGVVGTGIGIGASLSTTYAGYLSDYFGSSIAF
                     LGLTAVAVLGWIAVWAKMPETRPRRESAIVGHE"
     gene            complement(1823..2899)
                     /locus_tag="VLJ17_01185"
     CDS             complement(1823..2899)
                     /locus_tag="VLJ17_01185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HSV21622.1"
                     /translation="MQIAQIAPLTEAIPPKLYGGTERVVYWLTEELVALGHDVTLYAS
                     ADSCTSARLEAPWPRSLRLDGSVRDPNALHMLMLEQVRRHADEFDFLHFHLDYYPFSL
                     FSRQPIPFVTTLHGRLDLPEHQPVFAAFSSVPVVSISDAQRRPLPQAGWVRTVYHGLP
                     EQLLSPLPVKPQYFAFLGRIAPEKGVDRAITIARNCGVPLRIAAKVDKVDREYFDERI
                     RPLLDGSNTEYIGEITDAEKSEFLSGAIALLDPIDWPEPFGLVMIEAMACGTPVIAFN
                     RGSVPEVVDDGLTGFIVEDEKGAIGAFDRLSQLSRKDIRKQFERRFTARRMAQEYLAV
                     YRGLAERKARSLRLVVDRTPMLQN"
     gene            3174..4940
                     /locus_tag="VLJ17_01190"
     CDS             3174..4940
                     /locus_tag="VLJ17_01190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008965890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV21623.1"
                     /translation="MQDLSRYTNRPVAFTLRFVYRRRVAHIAILTAVLTAVGCSVSTQ
                     YGIKLLVDTLANPADGTNGVEVAFGLLAALIAADNLLWRLASWIANSAFVGVTGDLRR
                     DLFRHLTGHAPGYFIERMPGTLASRVTATSNAVFTVENMFIWNVLPPCAATVAAILLV
                     AAVSVPMALVLMLVAGMIVVALVRLAAGGQPLHHDFAIKAANVDGEMVDIISNMPLVW
                     SFCGLSRERERFEAIVAREMKARRNSLLHLETLRIWHAAVTVVLAVGVLAWAIILWKR
                     GVATAGDVVLACTLGLAVLHATRDLAVALVDVTQHIARLSEALGTLLAPHELRDHPEA
                     GSLIRRGASVELTHISFCYPNGHAVFKGLDLKVEPGQRVGLVGPSGGGKSSLFALIQR
                     FYDLQEGRILIDGQDIARVTQESLRAAIAVVPQDLSMFHRSAMENIRYGRPDAADAEV
                     IEAAGFARCCEFIEALPQGFATVLGDRGVKLSGGQRQRIAIARAFLKDAPLLLLDEAT
                     SALDGESEEAIHGALQTLMHGRTVIAIAHRLSTVRNFDRIVVLQAGRIVQDGPPDQLI
                     HEEGIYRDLVLREMGRLARQAA"
     gene            complement(5527..>5831)
                     /locus_tag="VLJ17_01195"
     CDS             complement(5527..>5831)
                     /locus_tag="VLJ17_01195"
                     /inference="COORDINATES: protein motif:HMM:NF013173.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="trehalose-6-phosphate synthase"
                     /protein_id="HSV21624.1"
                     /translation="GAAIEFRRALLVNPYDPESVADAIAQALAMPIEERRARHQALLA
                     VISAYDVDQWQREFLISLQGDDDSRNLNTKMGAQHQRSESTYPGSGAIVAGVNSAR"
BASE COUNT         1131 a         1653 c         1761 g         1286 t
ORIGIN      
        1 ttgcgaaaga gccgaccgtg gcgatcttcg atcaccgcga ggttcagggt attctcggca
       61 aggaggtccg cagcgccgcc aacgagaata tggggcggat cgttgatgtc atcgtggata
      121 gaaccggacg cgtccgggcg gctatcatcg atttcggcgg cttcctgggt gtcggcagcc
      181 gcaagatagc ggtagcatgg gatgcattgc gcttcccatc caatgaagac aaaacagagc
      241 gcgttgtcct tgagttaacg cgcgatcagg tgcgagccgc gtcggaatac aagccagaca
      301 aaacggtcgt cgtgctgggg gcgacaggca gtcttgaagc gctgccattt ccgtaagagc
      361 agttccgacg gagcaatgca ctgtccgcga aaccatcatc gcgccccatt gaccggccgg
      421 atcggcgatc gccgccacga gaccagccgg atgacttggc agccgcgccg caagggaacg
      481 ccaaagggcc tgcgcagaac gaacccgttc cccatccaac gcggcgcagc cagcgcgcgt
      541 tggactggtt tgtcttcttc gttgccgatg tccaaaccgg cttcggtccc tttgttgccg
      601 tctatctgac cggagagaaa tggacgcaag tcgatatcgg cctcgtgctc acggttggga
      661 gcctcgtggc attggtcggg caaatgcctg gcggtgtgct cgtcgatgcc gccagatcaa
      721 agcgtttggc ggcgggtctc gccactacgg tcatcgccat cagcgccctt gcatatgcgg
      781 cctccccggt attcgccgta gtattggcag cggctgtgct gcacgctgcg gccagctgcg
      841 tggtgggacc cgcaatggca gcgatcagtc tcggccttgt gggccatgca gcgatcggcg
      901 agcggctcgg ccgcaatgct cgctttgctg ccatcgggaa cggactcgca gctgccgcga
      961 tgggagcatg cggatatttg ctgtcggctc gcgcggtctt tttcgtcacg gcgatattgg
     1021 tcgcgccggc gttgctggca cttcgcctga tctcatcacg ggaaatcgat cccgaacgag
     1081 cccatggcgg gcctcgtgag cttcgggccg atgtgccgcc aaacaaactc gcggggttga
     1141 agcggacccg cccactacta attttcgcgg gctgcgtcat gttgtttcat ctcgcgaatg
     1201 cggcgatgct tccgctcatg ggaagtgtct tgacgacccg ttcaagtcaa tggccaacgg
     1261 tcttgattgc tgcatgtatt gtcgggccgc agctttttgt cgcgatcctt tctccctggg
     1321 tcggcagaaa gagccgaaca tggggttgtc ggccgctgct gctcattgcg tttgcggcac
     1381 tactagtacg cgggctcttt tttgctgcgg tggcaaatcc ctacctgctg gtcgccgtgc
     1441 aactgctcga tggcgttgcc gccgcagtat tggccgtcac agttcccctc atcatcgccg
     1501 atctcaccca cggcaccggg catttcaatc tagctcaggg agtggtcggc accggcattg
     1561 gcataggcgc ctcgctgagc acaacctacg cggggtactt aagcgattat ttcggcagtt
     1621 cgatcgcttt ccttgggttg accgccgttg cggtgctcgg ttggatcgca gtgtgggcta
     1681 agatgccgga aaccaggccg agacgcgaga gtgcgatcgt tgggcatgaa tgaggcggcg
     1741 ttcagctcgt cgtgcctctc ccgagaagcc gcatgcacaa gtgaccgatg tcggtaggac
     1801 ccggtgttga tcagcgcgag ccctagttct ggagcatggg cgtccggtcc acgaccagcc
     1861 gaagcgagcg cgctttgcgt tcagccaggc ctcgatatac ggcgaggtat tcctgagcca
     1921 tacggcgcgc cgtgaatcga cgctcgaact gcttgcgaat gtccttgcga gacaattgcg
     1981 agaggcggtc gaaggcgccg attgcgcctt tttcgtcctc gacgatgaaa ccggtcagac
     2041 cgtcgtcaac gacttccggc accgatccgc ggttgaacgc aatgaccggc gtaccgcacg
     2101 ccatcgcttc gatcataaca aggccgaacg gctcaggcca atcgatagga tccaacagcg
     2161 caattgcgcc gctcaggaat tcggatttct cggcgtcggt gatctcgccg atatactcgg
     2221 tgttcgatcc gtccaacagc ggacggatcc tttcgtcgaa atattcgcga tctaccttgt
     2281 cgaccttcgc agcgatccgc agcggtaccc cgcaattccg agcaattgta atcgcacgat
     2341 caaccccctt ctccggtgca atgcggccga gaaaggcgaa gtattgcggt ttgaccggca
     2401 aaggcgacag taattgctcc gggagcccat gatagacggt tcgaacccaa ccggcttgcg
     2461 gaagtgggcg acgctgtgca tccgaaatcg aaaccaccgg aaccgatgag aatgccgcaa
     2521 agacgggctg gtgttcgggg aggtcgaggc ggccatgcaa ggtggtgacg aacgggattg
     2581 gctggcggga aaacagagag aatggataat agtccaggtg gaaatgtagg aaatcgaact
     2641 catccgcatg tcgccgcacc tgttccagca tcagcatgtg caacgcgttt ggatctcgga
     2701 ccgaaccatc aaggcgcagc gaccgcggcc acggcgcctc aagccttgcc gacgtgcagg
     2761 agtccgcgct ggcgtacagt gtcacgtcgt gtccgagcgc aaccagttcc tcagtcaacc
     2821 agtaaacgac ccgctcggtt ccgccgtaaa gcttcggcgg gatggcctca gtcaggggcg
     2881 caatctgagc gatctgcata tacgcgaact ccttatcggc tgctccccgc gcctgatatt
     2941 gatcaaagca ataaagagca attgagacgt gcaaagcaag aaacttattt tttgcggcga
     3001 cgggaacttt ttcgacggct gtacgtcaac gccctacaga gagttcacgg cgcgttgggg
     3061 gttatcctga caacctgctc accagagcgg aacgccgata aaaccttggc agctctccgg
     3121 ctttcgtgac gacatgccac gaaaattgca aactcttgag ttatgtcgcc acgatgcaag
     3181 atctaagtcg gtacaccaac cgtcccgtcg ctttcacgtt acggttcgtc taccgacggc
     3241 gtgtggcgca cattgccatt ctgacggctg tccttaccgc ggttggctgc tcggtaagca
     3301 cgcaatacgg catcaaactc cttgtcgata cgttggcgaa ccctgccgat gggacaaacg
     3361 gtgttgaagt tgccttcgga ctacttgccg cgctcattgc ggcggataac ttgttgtggc
     3421 gattagccag ttggattgcc aactcggctt tcgtcggggt tacaggcgat ctgcgccgag
     3481 atctgtttcg tcatctgacc ggtcatgcac cgggatactt cattgagcga atgccgggca
     3541 cattggcgag ccgcgtcacc gcaacttcaa acgccgtgtt taccgtcgaa aacatgttca
     3601 tttggaacgt cttgccccct tgcgctgcaa cggtcgcggc aattttgctc gtcgcggcgg
     3661 tcagcgtgcc gatggcgctc gttttgatgt tggttgcagg aatgatcgtt gtcgctctcg
     3721 tgcgattggc ggccgggggg caacccctgc accacgattt tgccatcaag gccgccaacg
     3781 tggatggcga aatggtcgac atcattagca atatgccgtt ggtttggtcg ttttgtggtc
     3841 tgagccgcga gcgtgaacgg ttcgaagcga tcgtcgcacg tgagatgaaa gctcgtcgga
     3901 acagtctgct tcatctggaa acgctgcgaa tttggcacgc cgccgtgacc gttgtgttgg
     3961 cggtcggagt gcttgcatgg gccattatcc tgtggaaacg cggtgtcgca accgcgggtg
     4021 acgttgtcct ggcatgcaca ttgggactgg ctgtcctgca cgcgacgcga gacttggcgg
     4081 tcgcactggt cgatgtaacc cagcacattg caaggctgtc agaagcgctg ggaacactct
     4141 tggcccccca cgagctgcgc gatcatcccg aggctgggtc gcttattcga cgaggtgcat
     4201 ccgtcgagct gacccatatc tcattttgtt atccgaacgg acacgctgtt ttcaaaggcc
     4261 tggatctgaa agtggagccg ggtcagcgcg tcggtcttgt cggaccgtcg ggcggaggca
     4321 aatcaagtct tttcgcgttg atccaacgct tttatgatct tcaggagggg cgaatcctaa
     4381 tcgatgggca ggacattgcg cgggtcacac aagagagcct gcgcgccgcc atcgctgtcg
     4441 tccctcaaga tctttcgatg ttccaccgtt ccgccatgga aaacatccgg tacggcaggc
     4501 ccgacgcggc ggatgccgag gtcatcgaag ccgcgggttt cgcgagatgc tgtgaattca
     4561 tcgaggcact gccgcagggc ttcgcaaccg ttcttggtga tcgcggcgtg aagctgtcgg
     4621 gcgggcagcg ccaacgtatc gcgatcgctc gtgccttcct gaaagatgcg ccgctgcttt
     4681 tgctggatga ggcaacgtca gcgcttgatg gggaatccga ggaagccatt catggggcgc
     4741 tccagacgtt gatgcacggg cgtaccgtca ttgcaatcgc gcatcgcctc tcgacggttc
     4801 gaaatttcga tcgcatcgtc gtgctgcagg ccggacgcat cgttcaggac gggccgccgg
     4861 accaattgat tcacgaggaa gggatctatc gcgatcttgt tttacgagag atggggcgtc
     4921 tcgcaaggca agcagcatga tttcaatgtg gtcatctgac cgattttttt agcctaaagc
     4981 atgcaaccgg gaacgaattt gcagttgagg cattgttatg ttgaccggcc gccatccccc
     5041 ctccccccgc gcgtggccgg ccaatctgag gcgcaatcgg caattgtgcc gattgcgcct
     5101 cggctcctgc accaatctgg ccagtagcgg cgaaatgttt tcgccgttga atgtttataa
     5161 ggcgaaagta ttttctgcta aatgttttcg ccgtggaatg tttataagcc gaaggtattt
     5221 tcgcgcggtc ggccgggtga gcgttgagat ttgaaccaat tgtcgccgta aacgttatct
     5281 cttgacttca gactcgccaa atttgccgat cggaattttc aaaggaggct ccatgtcgga
     5341 agaatttacc tgtcccaatt gccagcacca atcggtgatc tatcaggatg caagcaaaga
     5401 tgatgcaatt gtcgaatgtc gcacctgcgg cgcgttactc ggtaccctcg cacaattccg
     5461 gcgtttcgtt gagcgacgtg tgcggcgcga tggtggtgtt gtgagccgtt gctgaccgcg
     5521 ttcgccctat cgcgcggaat taacacctgc cacgatcgcg cctgaacccg gataggtgct
     5581 ctctgatctc tggtgttgcg cgcccatctt tgtattcaga ttcctcgagt cgtcgtcgcc
     5641 ttgcagggag attagaaatt cccgttgcca ctgatccacg tcataggcgg agatcacggc
     5701 aagcagtgcc tggtggcgtg cgcgccgttc ctcgatcggc atggccagcg cttgcgcgat
     5761 cgcatcggcg acagattccg gatcataggg gttgaccagc agagcgcgtc ggaattcgat
     5821 cgcggcgccg g
//
LOCUS       DATILV010000055         1536 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_268822, whole genome shotgun sequence.
ACCESSION   DATILV010000055 DATILV010000000
VERSION     DATILV010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1536
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_268822"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            398..1372
                     /locus_tag="VLJ17_01200"
     CDS             398..1372
                     /locus_tag="VLJ17_01200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007597973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HSV21625.1"
                     /translation="MRRRDFVAGIAGLACAWPRTAAESRDFRVADTQSNDHPTARALV
                     HMSELVSDRTQGRHRMLVYADGLLGEQEASFEQTRTGAIDINRTNMAPLASFVGKANI
                     FGLPFLFRSADHLHRILDGAIGDDILQSLEPHGFVGLAFFEAGARSVYTVRRPVRSID
                     DIKGLRIRLQQSDLMIEMFAALGAEPVVLPYTRTRTALATGLIDAAENNWPSYVASDH
                     YSVAPYFALTEHTMTPDVLIMSMKAWSSLSPTDQSIFRNAARDSSIFLRGQWKNWEAS
                     FRKQALNLGVTVIEIDRKPLEAALTGLYTKVLTDSHSRHLVESIQKDQ"
BASE COUNT          340 a          459 c          417 g          320 t
ORIGIN      
        1 gcggatactt cgcgtaccac gcagtaccaa cgaactcgcg agcactcggc gccttccgtt
       61 accacattgt tgacctctgg cggcgggcgc tccggcgccg cagccaaaag gatcacatga
      121 cgtggacgcg ggtcgagcgg atcgcggatg cctggctccc acagcctcga atccttcatc
      181 catggcccga ccggcgcttt gacgtcaaac acccgaggta ggagccgtat gcccgaatcg
      241 ggctcgtacg gatctgtgcg gggggtgctc agtaatgggc gtccctaccg cgatcgcaaa
      301 ttctcccttg ccctccatat cgcttgtcgc aaatttctgt tttgatgacc taagtttgaa
      361 gcccaaatac acagcagtcc cgagtttggg gaaagccatg cgacgacgcg atttcgttgc
      421 aggaattgct ggattagcgt gcgcgtggcc gcgcaccgcg gccgaatcaa gagactttag
      481 agtagccgac acccaatcga atgatcaccc gacagcgcga gcgctcgttc acatgagtga
      541 gctcgtgagc gaccggacgc aaggccggca tcgcatgctc gtttatgcag acggcctatt
      601 gggcgagcaa gaagcaagct tcgagcaaac gcgcactgga gcaatcgaca ttaatcgcac
      661 caacatggct cccctcgcca gctttgtcgg caaagcgaat attttcggtt tgcccttcct
      721 tttccggtcc gccgatcatc tccacaggat tctggacggc gcaatcggcg acgatatttt
      781 gcagagtctc gaaccccatg gattcgtcgg tctcgcattt ttcgaagctg gagcaaggtc
      841 ggtttacacg gtcagacggc ccgtgcgatc gattgacgac atcaaaggat tacgcattcg
      901 attgcaacag tcggatctca tgatcgagat gttcgcggca ctcggcgcag aacccgtcgt
      961 acttccctat acccgcacca ggaccgcatt ggcgaccggc ctcatcgacg ctgccgagaa
     1021 taactggccg tcttacgtag cttccgacca ttactccgtt gctccctact ttgcgcttac
     1081 cgagcatacc atgacgccgg acgtccttat catgtcgatg aaggcttgga gtagcctgag
     1141 ccccacggat caaagtatct tccgaaatgc ggcgcgagac tcgagtatat ttttgcgcgg
     1201 ccaatggaaa aattgggagg cgagtttccg caagcaagca ctgaacttgg gtgtgactgt
     1261 catagaaatc gaccggaagc cgctagaagc cgcattgacg ggcctctata cgaaagttct
     1321 gacggattca cactcaagac atcttgtcga gtccatccaa aaagaccaat aaagtttccg
     1381 ccgctcatta agtgcgcggc gctacctcgt cgagaaattg tctgaacaag ccacgcaact
     1441 caagcggcgc cccctcgctg ccgtccgata gcaacggcac ggcggcatag gtcgcgcaat
     1501 cgatgcgcca gccggtgatt gtcggcgccg gttcgc
//
LOCUS       DATILV010000056        26452 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1802222, whole genome shotgun sequence.
ACCESSION   DATILV010000056 DATILV010000000
VERSION     DATILV010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 26452)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26452)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26452
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1802222"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            505..1755
                     /locus_tag="VLJ17_01205"
     CDS             505..1755
                     /locus_tag="VLJ17_01205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HSV21626.1"
                     /translation="MDVRIAARMATVLGLTILGATGLEGEAFAQSYPPGPYSSGPYRV
                     PGPYTAAPPYRVVPLPPLPDDDDDQVPLPAPGPYGRPSNAPYPYDSQQRSPAGIQSEA
                     LPPPSSYGRPSGAPYPYDTQQRSPAGIQSEALPPPGAYGTQQRSSAGTQSGALPPSSP
                     PNVGTYPDVGSAPPGARGYSYGMWEPMRPPGEVYGPNDRGLSPGPGGRPFDYGNRDYG
                     RLPVDRPPVETTPSPPGSTGYAALPPDYQPEAGQPKEPPPQFRRQMVDYQTREPAGTI
                     IIDTPHTHLYLVLGGGKAMRYGIGVGREGFTWSGREKISRMSEWPDWHPPKEMIDRQP
                     YLPRFMAGGESNPLGARALYLGNTLYRIHGTNQPSTIGSFVSSGCIRLINADIEDLYG
                     RVTVGTRVVVLPGGKPPETTASVR"
     gene            1826..2131
                     /locus_tag="VLJ17_01210"
     CDS             1826..2131
                     /locus_tag="VLJ17_01210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21627.1"
                     /translation="MGQFRRPVVWGCIAWISTCPHFDVRSNALPLAYGMTPEVTAAAL
                     ESPLARLSGHQGSEIYYTERTTLTTAFILRERQRLWLQFRHRRLTGWKYDWDRPSAW"
     gene            complement(2197..4359)
                     /gene="pnp"
                     /locus_tag="VLJ17_01215"
     CDS             complement(2197..4359)
                     /gene="pnp"
                     /locus_tag="VLJ17_01215"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HSV21628.1"
                     /translation="MFNIHREELDWGGRKLVLETGKIARQADGAVFASYGETTVLATV
                     VAAKKPKEGIDFMPLTCNYQEKYFAAGRIPGGYFKREGRPTERETLTSRLMDRPIRPL
                     FAEGWRCDTQVIVTCMSHDQENDPDILAMVAASAALTISGVPFMGPMGAARVGFINNE
                     YVLNPQIDEMTESNLDLVVAGTQDAVLMVESEAKELPEEVMLGAVMFGHRHFQPVIEA
                     IIRLAEKAAKEPRDLVTADNAALEKEMLDVVEKELRSAYAIPDKMARHNAVDAAKAGV
                     MAHFFKPGGTSSPYDMERVAGVFKELEAKIVRWNILDTGRRIDGRDLKTVRPIVAEVG
                     VLPRAHGSALFTRGETQAFVVATLGTGEDEQFVDSLTGTYKESFMLHYNFPPFSVGET
                     GRLGSPGRREIGHGKLAWRAVRPMLPLKHEFPYTIRVVSEITESNGSSSMATVCGASL
                     ALMDAGVPLRAPTAGIAMGLILEDKRYAVLSDILGDEDHLGDMDFKVAGTEKGVTSLQ
                     MDIKIAGITEEIMGVALTQAKEGRLHILGEMAKAITSARAELGEHAPRIEVLTIPTDK
                     IREVIGSGGKVIREIVEKTGAKVDISDDGTVKVASSSGESIKAAINWIKSIASDPEVG
                     MIYDGTVVKVMDFGAFVNFFGSRDGLVHISQLAPRRVQKTTDVVKEGDKVKVKLLGFD
                     ERGKVRLSMKMVDQQTGEDLEAKQKAESEIHREAAGGE"
     gene            complement(4386..4655)
                     /gene="rpsO"
                     /locus_tag="VLJ17_01220"
     CDS             complement(4386..4655)
                     /gene="rpsO"
                     /locus_tag="VLJ17_01220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HSV21629.1"
                     /translation="MSITAERKSEVIKTHAKKAGDTGSPEVQVGILSERINNLTEHFK
                     KHVKDNHSRRGLLKLVSQRRQLLDYLKRADESRYKALIQKLGIRR"
     gene            complement(4658..5743)
                     /gene="truB"
                     /locus_tag="VLJ17_01225"
     CDS             complement(4658..5743)
                     /gene="truB"
                     /locus_tag="VLJ17_01225"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011470965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004730 - pseudouridylate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HSV21630.1"
                     /translation="MNPTIVDEYPVDADGSKVDAASPSASDPQPPLGRSRRANKAQQF
                     KREKFDVHGWVVLDKPIGMTSTHAVSVIKRLFAAKRAGHAGTLDPLASGCLPIALGEA
                     TKTVPFVIDGRKTYHFTVRWGEERDTDDAEGKVVASSAARPTPEAITALLPRFVGAIE
                     QVPPRFCAIKIEGERAYDIARDGEAFELKPRVVNINRLALVEMPDSDHTCFEAECGKG
                     TYVRALARDLGRMLGCHGYVAALRRTGVGPFAESDMISLEQIEALCHRAAAGEGGLAD
                     ALFPVATALDDIPALAVSRADAARLQGGQAVLMRGRDAPVVHGTVYVTASGNLIALAE
                     VDRGEIVPKRVFNLAGLQGRAGRQEGR"
     gene            complement(5740..6156)
                     /gene="rbfA"
                     /locus_tag="VLJ17_01230"
     CDS             complement(5740..6156)
                     /gene="rbfA"
                     /locus_tag="VLJ17_01230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HSV21631.1"
                     /translation="MSRGHAREPAKGPSQRSLRVGELVRHALSEILARGEVHDSVIET
                     HLITIPEVRMSPDLRVATVYILPLGGQDAAVVLAALDRNKRYLRGEVARRVNLKFAPD
                     IRFRVDERFDEAERIERLLRSPQVRRDLDNDPGEHK"
     gene            complement(6168..8804)
                     /gene="infB"
                     /locus_tag="VLJ17_01235"
     CDS             complement(6168..8804)
                     /gene="infB"
                     /locus_tag="VLJ17_01235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012494152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HSV21632.1"
                     /translation="MTETKNPGEKTLTVTPTKTLTLKRSVEQGVVRQSFSHGRTKAVV
                     VEKVKRRTVGPGDGKVTEAAPASTPAVSMPRRGAPGTRGAAGLTTGVAAPSAAPNVTG
                     GKPSGVVLRQLTDEERTARAHALAESKVSEIEERRIAEEAARRREEREAAERAEREAA
                     EARKREEDERRRHDEETRRKAETEAKKRFGDDETKPRTAAPAVGAAAAINARNIVQEP
                     DEEEAPRPARRGTGAARPTPAPKPTRGGAEKRRGRLTLVTALTADEERERSVASFRRR
                     TQRLKGHAVNEPKEKLVREVTIPEVITIQELANRMSERAVDVIKLLMKQGQMAKITDT
                     IDADTAQLIAEELGHSVRRVAESDVEEGLFDKADDPAMLYPRPPVVTIMGHVDHGKTS
                     LLDAIRATNVAGGEAGGITQHIGAYQVTSTLGSKITFIDTPGHAAFTSMRARGAKVTD
                     IVVLVVAADDGVMPQTVEAIQHAKAAKVPMIVAINKIDKPDAKPDRVRTELLQHEVQV
                     ESLGGDVLDVEVSATKKINLDKLLETIGLQSEILDLKANPDRPAEGTVIEAKLDRGRG
                     PVATVLVQRGTLRNGDIVVAGAEWGRVRALLSDTGLSVNSASPSTPVEILGFNGTPEA
                     GDRLAVVESEARAREVTEYRARQRREKVAARASGMRGSLEQMMTQLKSAGRKEFPLLV
                     KGDVQGSVEAIVGALEKLGNAEVGARIILAGVGGISESDITLAEASGAAVIGFNVRAH
                     KEAREMAEHDGVEIRYYNIIYDLVDDVKKAMSGLLAPTLRETMLGNAVILEIFNISKV
                     GKIAGCRVTEGTVERGANVRLIRDNVVIHEGKLSQLKRFKDDAREVVAGQECGMSFEN
                     YQDMRVGDVIECYRVETVQRSL"
     gene            complement(8804..9511)
                     /locus_tag="VLJ17_01240"
     CDS             complement(8804..9511)
                     /locus_tag="VLJ17_01240"
                     /inference="COORDINATES: protein motif:HMM:NF006622.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HSV21633.1"
                     /translation="MMQILAQDAETDRGSPAAAVVTQRLCIATRKVRPVGELIRFVAG
                     PDGAVVPDLKRRLPGRGVWITARRRLVEEAVQRRAFGRGLKVDVSAPTDLTDTLDRLL
                     ERSALDALSIAHKAGLVIMGFTRVETALGAAAPPVALIRARDAGAESGPKLAAAFRHR
                     VDHAAKGKIVEAFRSAQLDLALGRLNVVHAALLAGRASETFLARWRFLEYFRADDPDD
                     RGLGSRQPGDFIPDSGS"
     gene            complement(9528..11138)
                     /gene="nusA"
                     /locus_tag="VLJ17_01245"
     CDS             complement(9528..11138)
                     /gene="nusA"
                     /locus_tag="VLJ17_01245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HSV21634.1"
                     /translation="MAVSANRLELLQIADAVAREKAIDRGIVIAAMEDAIQKAARSRY
                     GSETEVRAEINPKTGEMRLSRLLLVVDQVENDAIHISVEDARRRNPAARVGDYIAEPL
                     PPLEYGRIAAQSAKQVIVQKVREAERDRQYQEFKDRIGDIVNGIVKRVEYGNVVADLG
                     RGEAIVRRDELLPRELFRNGDRIRAYIYDVRREPRGPQIFLSRTHPQFMAKLFAQEVP
                     EIYDGIVEVKAVARDPGSRAKIAVISRDSSVDPVGACVGMRGSRVQAVVNELQGEKID
                     IIPWSPDVATFVVNALAPAEVAKVVLDEDRERISVVVPDQQLSLAIGRRGQNVRLASQ
                     LTGWDIDILTEQEESERRQAEFEKRTKMFMEALNVDEVVGQLLASEGFNSVEELSVVD
                     QKDIALIEGFDDDTASELQTRARDYLAQIEAEYDAKRLELGVADALKEVPGVTAKMMV
                     ALGENGVKTVEDLAGCATDDLVGWTERKDGEATRNPGFLDGFDLTREECEQIIMRARV
                     KAGWITEADFAAQHAAPPETEAAAEQPV"
     gene            complement(11142..11873)
                     /gene="rimP"
                     /locus_tag="VLJ17_01250"
     CDS             complement(11142..11873)
                     /gene="rimP"
                     /locus_tag="VLJ17_01250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HSV21635.1"
                     /translation="MTTDTIPVTDTGPIDKRALAEPRLIAETGLASRIAAIVAPVLVD
                     LEFRLVRVKVSGLDGCTVQIMVERPDGTMAIEECEAVSRAISPVLDVADPIGPAYRLE
                     ISSPGLDRPLVRRSDFERHIGEIVKIELAVALDGRRRYRGNLVGIDNLAAHVRLEDGP
                     EGAADAQLPFDDMTDARLVLTEDLIAAALRRGKSSPPAGDGEVGAALRRSGESRPRYD
                     HASRQRMKNKRASGTPPAAPQPEGE"
     gene            complement(12257..12970)
                     /gene="trmB"
                     /locus_tag="VLJ17_01255"
     CDS             complement(12257..12970)
                     /gene="trmB"
                     /locus_tag="VLJ17_01255"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011470957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008176 - tRNA
                     (guanine(46)-N7)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HSV21636.1"
                     /translation="MAMPKDNDYAASRERAFFGRRKGHKLRSRQVDLMATLLPRLALA
                     LDRPPPDRLVDAFSLPLESVYLEIGFGGGENLVAEAAAHPAVGFIGCEPFVNGMAKIL
                     ALIEAGAMDNIRLYAGDAIDLLAWLPDASIARIDLLYPDPWPKRRHWKRRFVQNRTVA
                     MMARALQPGGMFRFATDIADYAAWTLEHLVHAPDFVWTAERADDWRQPWAGFRGTRYE
                     AKAKREGRTPCYLEFRRNG"
     gene            complement(13053..14246)
                     /gene="metK"
                     /locus_tag="VLJ17_01260"
     CDS             complement(13053..14246)
                     /gene="metK"
                     /locus_tag="VLJ17_01260"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HSV21637.1"
                     /translation="MSRASYLFTSESVSEGHPDKVCDRISDEVVDAFFEVGPRHGWDP
                     RHVRVACETLATTNRVIIAGETRGPTQITRDYIAHLARLAVKDIGYEQEGFHWEKASI
                     EVHLHAQSSDIAQGVDAAGNKDEGAGDQGIMFGYACRETPELMPAPIYYAHHILKTMS
                     QARRSGETQALGPDAKSQVTIRYESGKPVEATQIVVSTQHFDEKLSSHDIQAIVEPYV
                     RQALPPGWIGKHTVWHVNPTGKFVIGGPDGDCGLTGRKIIVDTYGGAAPHGGGAFSGK
                     DPTKVDRSAAYAARYLAKNVVAAGLADRCAIQIAYAIGVAKPLSLYVDCYGTGQVAET
                     RLEKLLDEVMDLSPRGIREHLSLNRPIYARTSAYGHFGRPPEPDGGFSWERTDLVDEL
                     RRSAN"
     gene            complement(14400..14816)
                     /locus_tag="VLJ17_01265"
     CDS             complement(14400..14816)
                     /locus_tag="VLJ17_01265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011923320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSV21638.1"
                     /translation="MTKKAPNPIDKHVGSRVRMRRMMLGMSQEKLGDALALTFQQVQK
                     YEKGTNRIGASRLQQISQILQVPVAFFFEGAPHLSGTFKEGAEDAPSPTYVSDFLATS
                     DGLSLTKAFMRIPDPKLRRRIVDLVQQIAGDDGDGK"
     gene            complement(15036..16601)
                     /gene="lnt"
                     /locus_tag="VLJ17_01270"
     CDS             complement(15036..16601)
                     /gene="lnt"
                     /locus_tag="VLJ17_01270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011470955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006497 - protein lipidation [Evidence
                     IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HSV21639.1"
                     /translation="MAFLAGAASTLALAPINLWPVMFVTFPPLVWLLDGVAAARWRGI
                     EAAFAIGWWFGFGYFLAGLYWIGSAFLVDAKTFGWLLPFAVTMLPAGLAVFTAGGFVV
                     ARLLWAPGRFRILTLAAALSSAEWLRGHLFTGFPWNAFGYALTTPLPLAESVAIFGIW
                     GLTFVAIAVFASPAVLADEVGSARQSWMPVILAGCALTTLAAYGGLRLARNPTEVVEG
                     VHLRIMQPNIPQDERFSYAAKPQIMSRYIEMSERTGKPGVQGRTTGGLDGVTHLIWPE
                     SAFPFFLTREPDALSMIADMLAPNTTLITGAARRAEPVPGRGVRAYNAIYVIDHNGTI
                     LASYDKLHLVPFGEYLPFQDLLERAGLTQLTNVPGGFLPGERRRKIAVPGAPDLLPLI
                     CYEIIFPGEAVPKGERPGWLLNLTNDAWFGISVGPYQHFQQAKVRAIEEGLPLIRAAN
                     SGVSAVIDPLGRVIAALPLGHDGLLDSALPRPAHITVYARMGDALFIVAVLGTMFASL
                     LIRSRREHSTHGY"
     gene            complement(16658..17836)
                     /locus_tag="VLJ17_01275"
     CDS             complement(16658..17836)
                     /locus_tag="VLJ17_01275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HSV21640.1"
                     /translation="MADTNARTIADSVATPAGQRDFPELARRSNGLSRGNRESWLNRM
                     MRAVFGWSPTSIRSDLKVLLDGAAVETGFSPDESRMLKSILSLRERRLDDLMVPRADI
                     VAVQQDIPLGELVKMFENAPHSRLVVYNDTLDEPVGMVHIRDLIAFMTARATVHQEMN
                     AARTEPLLAGLDFTALDLDMPLSATKIIRTILFVPPSMPAIDLLAKMQATRIHLALVI
                     DEYGGTDGLASIEDIVEEIVGDIEDEHDEATERTVVREPDGSYVAVGRASLDEAVAVI
                     GAEFDVGDAAEEVDTIGGYIVTLIGRVPVRGELLPGPGVFEIEILDADPRRVKRVRIY
                     PRKPAARSVERNPAARRPEAASRAATSPIVPQTEKGEPTSVPEAAEHSSLQAQVKSQP
                     "
     gene            complement(17847..18371)
                     /gene="ybeY"
                     /locus_tag="VLJ17_01280"
     CDS             complement(17847..18371)
                     /gene="ybeY"
                     /locus_tag="VLJ17_01280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HSV21641.1"
                     /translation="MKSSPSASPQPDPAIDVLIESEAWRMLPEAEDIVRRAIAFAATS
                     TVAVQYRNAEVAVLLCDDKMIAGLNARWRGQDRPTNVLSFPAPPRQGASPDGKIPLGD
                     IAIAYQTLAREAGEQGKTVFSHLSHLVVHGFLHLLGYDHHTNCEAERMERLERDILAR
                     IGIADPYALRNANI"
     gene            complement(18368..19378)
                     /locus_tag="VLJ17_01285"
     CDS             complement(18368..19378)
                     /locus_tag="VLJ17_01285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HSV21642.1"
                     /translation="MANPVSADTATQIVVAFDDNRLASALFGQYGQNLALIERRLDVV
                     AEQRGNHVTVAGSRDGCEQARHVLEGLYDELKRGHDLATGDVEGAIRLAIAQGSLFDF
                     DPATSRASFEEINLRKRPVRARTAGQDAYIRALRRNSLVFGVGPAGTGKTWLAVAYAI
                     ALFERKEVDRIILSRPAVEAGERLGFLPGDMREKVDPYLRPIYDALFDLMDSRIVERA
                     LQTNEIEIAPLAFMRGRTLANAVIILDEAQNTTSMQMKMFLTRLGENSRMVVTGDPSQ
                     VDLPSGQTSGLAEAVRLLAEVDGIGRVVFTHEDVIRHELVAKIVAAYDNAARPPRLRG
                     KE"
     gene            complement(19416..20795)
                     /gene="miaB"
                     /locus_tag="VLJ17_01290"
     CDS             complement(19416..20795)
                     /gene="miaB"
                     /locus_tag="VLJ17_01290"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041576618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HSV21643.1"
                     /translation="MRKLHVKSFGCQMNVYDSNRMTDLLTRDSYMETAAPEDADLIIL
                     NTCHIREKAAEKVYSELGRIRKLKREATRAGRKVIVAVAGCVAQAEGQEIVRRAPVVD
                     MVIGPQNYHRLPALLAQAERGARVVDTEFPIEDKFAHLTPPTAAAIRARGVSAFVTVQ
                     EGCDKFCTFCVVPYTRGAEASRPVAAIVAEVENLANAGVREITLIGQNVNAYHGEAAN
                     GRPVTLGHLMNSLAEVPGVLRLRYTTSHPRDVDDGLIAAHRDLAILMPQLHLPVQSGS
                     DRMLVAMNRRHTRAEYLNAIARLRAARHDMAFTSDFIVGFPGETEEDFSDTLRIVDEV
                     GFAGAFSFKYSPRPGTPAADRQDQIADEVKTERLARLQECIDRHQSAFNRNCMGRNLD
                     VLLEKPGKIPGQLVGRSPYLQPVQVMAPSSLIGEIATVQITGIGSNSLFGALCSTQAR
                     EPALAGAGG"
     gene            21259..21894
                     /locus_tag="VLJ17_01295"
     CDS             21259..21894
                     /locus_tag="VLJ17_01295"
                     /inference="COORDINATES: protein motif:HMM:NF017999.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HSV21644.1"
                     /translation="MEFDNSFEVPLRIDEAWKVLMDIRRIAPCMPGAALTDVIDERTY
                     RGRIGVRLGPVALTFVGTVKFEEVDDANHKARVAAQGNDAKGRGAANAIASFHLEPVS
                     GGTKVLVHTNLTLSGAVAQYGRGVGIIQMTAAQIITQFANNMKAQLAQDGVAGAGAAS
                     TTPPPPASAPPAPTIQSTAPAPPPPTAKPISGFTLMVKVLWVSLKRLFGRA"
     gene            22442..22954
                     /locus_tag="VLJ17_01300"
     CDS             22442..22954
                     /locus_tag="VLJ17_01300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21645.1"
                     /translation="MRAQFLAFTFLAAAVASSAMAQQAASPPTKTFMNNKEIMGLIDK
                     AKADRKGDAPLVVEPILSLAPYRAQLEYRPGKAPAALHEKDAELMVVLEGTGEIVTGG
                     KLADEKRTNANNLSGSSITDGNSQAVVKGDMLIVPANTPHQVIPTGGAPIVLMTLHVP
                     HPPTNWPPAN"
     gene            22995..23159
                     /locus_tag="VLJ17_01305"
     CDS             22995..23159
                     /locus_tag="VLJ17_01305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21646.1"
                     /translation="MAVISVNVSDLASPIHHIKRRLAALDDGCGDAAPEAAAALERFQ
                     ARAGVRLPRQ"
     gene            23653..24876
                     /locus_tag="VLJ17_01310"
     CDS             23653..24876
                     /locus_tag="VLJ17_01310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HSV21647.1"
                     /translation="MNRIGKYLRVAPAFAAALVTATAASAATDCRTSGSFESWLARFK
                     AEAAAQGIAKSAIDTASPYLVYDQRIVNIDRGQRIFAQSFLEFSGKMLPAYRLQQGAA
                     EIRKYQAIFDRADKQYGVPAAVTTAFWGLESDFGSNMGRDHSIKSLVSLAYDCRRAEM
                     FRGHLFDALRLIQRGDLNAAEMLGSWAGELGQTQMMPSEYIKYAVDYDGDGRRNLLRS
                     VPDVIGSTANYLVSLGWKRGEPWLREVRVPDNMPWDQADLAIQHPLAKWAEWGITLPD
                     GRPLQQENLQASLLLPMGRFGPSFLVFDNFQAYLKWNSSLVYSTTAAYYAARLAGAPP
                     MRRGNGTPPPPLAFEQARELQQLLIRAGYDVGGADGKLGISSRQATRAMQIKLGLPAD
                     SYPTVELLARMRAGR"
     gene            complement(24959..25762)
                     /locus_tag="VLJ17_01315"
     CDS             complement(24959..25762)
                     /locus_tag="VLJ17_01315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HSV21648.1"
                     /translation="MRAFFPMGAIVVVTLALLPFQWLAVRMNWPMRRRIPTFYHGIVC
                     WVLGIRITTVGRQSDDRPLLIVANHTSWLDISVITAAAPVVFVAKREVSTWPIFGLLA
                     KLQRSVFVDRTRRHKTRDVNSEIARRLADGDPVLLFGEGTSSDGNRVLPFRTALIGAA
                     RDAIAETEHVKRVWIQPLSVAYTAMLGLPLGRQSRCRVAWYGGASLLPHLRQLIARGA
                     IDVVVSWGDPVAYDEFFDRKSVARRLEGEVRAMTVAALRGRPFAPIEKA"
     gene            complement(25813..26247)
                     /locus_tag="VLJ17_01320"
     CDS             complement(25813..26247)
                     /locus_tag="VLJ17_01320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HSV21649.1"
                     /translation="MTDLQLSHIEAQCVARGMRMTEQRRVIARVLSGAEDHPDVEELF
                     RRCALIDSRISISTVYRTVKLFEDAGIVERHDFRAGRARYEQLRESHHDHLINLRTGE
                     VIEFESVEIERLQAEVARQLGYRLVDHRLELYAVPLDDKAKG"
BASE COUNT         5108 a         8366 c         7794 g         5184 t
ORIGIN      
        1 tccgctgcca aaccacaaaa agagacgaaa actggtgacc gtcagggcag aggctgctgt
       61 tgggccttag tccgaacttt acccagactt tgtgtaagtg cttgaagaga ctcaatactc
      121 gtaaaatctg tagtcataac gcgcgaaaca aatcacttga cgtcgcgtcc tctgagcatt
      181 cgaatcgttc gagctgggct ctcggtcgat tcttttcgtg cgcgactacg tccggagctc
      241 gccaaaagcc gaatgtagtc attgctcgcg agcgaaggcg agcaagttca agcacttgtc
      301 ctcagcaaag gcaaaattcg gcatacggca caatcgcgtc ccagcattgg cacgtgcggt
      361 cggtgcattc aaacagacgt atgcacgcaa aatcgacctc ctatgcacgc aaaatcgacc
      421 ccctaagtgg atgtttactg ttttttcgcc ttgttcctgc cctatcatat tgaatagtaa
      481 agtggcttca tggggattcc ggagatggat gtacgcatcg ctgccaggat ggcgaccgtg
      541 ttgggcctga ccattttggg tgcgacgggg cttgagggcg aggccttcgc ccagtcttat
      601 ccccccggcc cctactcgtc cggaccatat cgcgtgcccg gcccctacac agccgccccg
      661 ccgtaccgcg ttgtgccgct tccgccgctg ccggatgacg acgatgatca ggttcccttg
      721 ccggcaccgg gcccgtatgg ccgtccatcg aacgcgcctt atccctacga tagtcaacaa
      781 aggtcgcctg ctggcatcca gagcgaggcc ttgccaccgc caagctccta cggccgtcca
      841 tcgggcgcgc cttatcctta cgatactcaa caaaggtcgc ctgctggcat tcagagcgag
      901 gccttgccgc cgccgggcgc ctacggaacg cagcaacggt catctgctgg cacccagagc
      961 ggtgcgttgc cgccctcaag cccgcccaat gtgggcacct accccgacgt cggatcggcc
     1021 ccaccgggag cccgcggata cagctatggg atgtgggagc ccatgcgtcc gccgggcgag
     1081 gtgtatgggc ccaatgatcg ggggctgtcc ccaggtcccg gcggccgacc cttcgactat
     1141 ggcaataggg actatggcag gctcccggtc gacagaccgc ctgtcgagac aacaccaagc
     1201 ccccccggaa gcaccggcta tgcggccctt ccaccggact accagcccga ggcggggcaa
     1261 cccaaagaac cgccgccgca gtttcgtcgc cagatggtcg attatcagac ccgcgaaccg
     1321 gctggcacaa tcataatcga cacgccccat acccatttgt acttggtcct cggtggcggc
     1381 aaggcaatgc gctacggtat tggcgtgggt cgcgaaggtt tcacttggtc gggccgcgaa
     1441 aagatcagcc gaatgtcaga atggccggat tggcatccgc ccaaggaaat gattgaccgg
     1501 caaccgtatc tgccgcgttt catggcgggc ggggaaagca atcctctggg cgcgcgtgcg
     1561 ctctatctgg ggaacactct atatcgtatc cacggcacca atcagccgtc aactattggg
     1621 tcgttcgtgt cttccgggtg tatccgcctg atcaacgccg acatcgagga cctctatggt
     1681 cgggtcacgg tgggtacccg cgtggttgtg ctgcccgggg gcaagccgcc ggaaaccacc
     1741 gcaagtgtcc gatagacgcg ccgccgaagc agcacgatta tagtgtcgcc caaaattggc
     1801 aggtcacgcg atcggatttt agaaaatggg acagttccgg cggccagtgg tgtggggctg
     1861 catagcttgg atttccacct gtccgcattt cgacgtgcgc tcgaatgccc tgccactggc
     1921 gtacggcatg acgcctgagg tcaccgcggc ggcgcttgaa agtccgctgg ctcgcctgtc
     1981 cgggcaccag ggctcggaaa tctactacac cgagcggacc accctgacga cagccttcat
     2041 cctccgtgaa aggcagcgtt tgtggctgca gttccgccac cgccggctca ccggttggaa
     2101 atacgactgg gatcggcctt cggcgtggta gtcgttcggc tttactaaac actaggagcg
     2161 gcccggccgc cccccgggcg ctccgcgcaa tcgcggttat tctccaccag cagcttcgcg
     2221 atggatttcg ctttccgctt tctgcttggc ctcgagatct tcgccggttt gctggtcgac
     2281 catcttcatc gacaggcgaa ccttaccgcg ctcgtcgaag cccaatagtt tgaccttcac
     2341 cttgtcgcct tccttgacca catcggtggt cttttgcacc cgtcgtggtg cgagttggct
     2401 gatatgcaca aggccatctc gagagccaaa gaaatttacg aatgcgccaa agtccatcac
     2461 cttgacgacc gtcccgtcgt aaatcattcc aacctcggga tcggaggcaa tcgatttgat
     2521 ccagttgatg gccgccttga tcgactcacc cgatgaggaa gccaccttga cggtgccgtc
     2581 gtcggaaata tcgaccttgg ctccggtctt ctccacgatc tcccggatga ccttgccgcc
     2641 tgacccgatc acctcgcgga tcttgtcggt cggaatcgta agcacctcga tgcgcggcgc
     2701 atgttcacct agttcggcgc gggccgaggt gatcgccttc gccatttcgc ctagaatatg
     2761 cagccgcccc tccttggcct gggtcagggc gacccccatg atttcctcgg taatgcccgc
     2821 gatcttgatg tccatctgca gcgaggtgac acccttctcg gtgccggcga ccttgaagtc
     2881 catgtcgccc agatggtcct cgtcaccaag gatatcggag agaacggcgt aacgcttgtc
     2941 ttccaagata aggcccattg cgatgccagc cgttggtgcg cgcaacggaa cgccggcgtc
     3001 catcaaggcg agcgaagcgc cgcataccgt ggccatcgat gacgagccgt tcgattcagt
     3061 aatctccgaa acgacacgaa tcgtgtaggg gaattcgtgc ttaagcggca gcattgggcg
     3121 aacggcgcgc cacgcgagct tgccgtgacc aatttcgcgt cgccccggcg aaccgagacg
     3181 accggtttcg cccactgaaa acggcggaaa gttgtagtgc agcatgaagc tttctttata
     3241 agttccggtc agcgagtcga cgaactgctc gtcctcgccc gtgccgagcg tcgctaccac
     3301 gaaagcctgg gtttcaccgc gggtgaacag tgctgagcca tgggcccgcg gcagcacccc
     3361 gacctcggcc acgattggcc gtactgtctt gaggtcgcgt ccatcaatgc gacggcctgt
     3421 gtcgaggata ttccagcgca cgattttggc ttcgagttcc ttgaatacgc cggcaacccg
     3481 ctccatgtcg tagggcgagc tcgtcccacc tggcttgaag aagtgcgcca ttacgcctgc
     3541 cttggcggcg tccaccgcat tgtggcgtgc catcttatcg gggatcgcgt aggcggagcg
     3601 cagctccttc tcgaccacgt cgagcatttc cttttcaagc gccgcgttgt ccgcggtgac
     3661 caagtctcgc ggttctttgg cggccttctc ggcgagacgg atgatcgctt caatcaccgg
     3721 ctggaaatgc cgatggccga acatcacggc gcctagcata acttcctcgg gaagttcctt
     3781 tgcctcggat tcaaccatca gcaccgcgtc ctgggtgccg gcgaccacaa ggtcaaggtt
     3841 gctctccgtc atctcgtcga tttgcggatt gagaacatac tcgttgttga tgaagccgac
     3901 ccgggcggca cccattgggc ccatgaacgg cacaccggag atcgttaggg cggccgaggc
     3961 cgccaccatc gccagaatat ccggatcgtt ttcctgatcg tgcgacatgc acgtcacgat
     4021 gacctgagta tcgcagcgcc aaccttcggc gaataacgga cggatggggc ggtccatcaa
     4081 ccgcgacgtc aatgtctcgc gttcggtcgg gcgtccttcg cgtttgaagt agccgcccgg
     4141 aatgcgaccg gctgcaaaat atttttcctg gtagttgcag gtcagcggca tgaaatcgat
     4201 gccttcctta ggcttcttcg ccgccacgac ggtcgccaag accgtggtct cgccatagct
     4261 ggcgaacact gcgccgtccg cttgccgggc tatcttgccg gtttcgagaa cgagcttgcg
     4321 cccgccccaa tcgagttcct cacgatggat gttaaacata gctttcgact tctttcatga
     4381 tctgctcaac gacgaatgcc gagtttctgg atcagcgcct tgtagcggct ttcgtcagca
     4441 cgcttgaggt aatcgagcaa ctggcgacgc tgggatacaa gcttcagcaa gcctcgtcgt
     4501 gaatgattgt ctttaacgtg tttcttgaaa tgctcggtga gattgttaat gcgctccgaa
     4561 aggattccca cctggacctc aggtgacccg gtatcgcccg ccttcttggc atgcgttttg
     4621 atgacttcag atttacgctc ggcagtgatc gacatcgtca acgaccttcc tgtcggccgg
     4681 ctctaccctg gagtccggcg aggttgaaca cgcgcttggg gacgatttcg ccgcggtcga
     4741 cttcggctaa ggcaatcagg ttgcccgacg ccgtaacgta gaccgtgcca tggacgacgg
     4801 gggcgtcccg tccgcgcatc aaaacggctt gaccgccttg cagccttgcc gcgtcggccc
     4861 tgctgacggc tagcgccggg atgtcgtcca gcgcagtcgc aaccgggaac agtgcgtcgg
     4921 cgaggccgcc ctcgccggca gcggctctat ggcacaaagc ctcaatttgt tccagtgaaa
     4981 tcatgtccga ttcggcaaac ggcccgacgc cggtccgacg caatgccgct acatacccgt
     5041 ggcacccgag catccggccg agatcgcgcg ccaatgcccg cacgtaggtt cccttgccac
     5101 attccgcctc gaagcaggtg tgatctgaat ctggcatctc gaccagcgca agacgattga
     5161 tgttcaccac ccgcggtttg agctcgaacg cttcgccgtc gcgggcgatg tcataggcgc
     5221 gctcgccttc gatcttgatg gcgcaaaacc gcggtggcac ttgttcgatg gcgccaacga
     5281 atctcggtag aagcgccgtg atcgcttccg gcgtcggacg cgcggcactt gatgccacca
     5341 cttttccctc ggcgtcgtcg gtatctcgtt cctcgcccca ccgaaccgtg aagtgatagg
     5401 ttttgcgccc gtcgatcacg aacggtaccg tcttggtggc ctcccctaag gcgatcggca
     5461 agcatcccga cgccagcggg tcgagggtac cggcatgacc ggcccgtttg gctgcaaaca
     5521 ggcgctttat caccgacacc gcgtgagttg acgtcatgcc gattggtttg tcgagcacga
     5581 cccagccatg gacgtcgaat ttttcgcgtt tgaactgctg ggctttattg gcccgacggg
     5641 aacgacccag cggaggttgc ggatcggacg ccgatggcga ggcggcgtcg accttcgacc
     5701 catcggcatc aacggggtat tcatcgacaa ttgtgggatt catttatgct cgcctggatc
     5761 gttgtcgaga tcgcgtctga cttgcgggga gcgcagcaat cgttcaattc gctcggcttc
     5821 gtcgaagcgt tcatcgacgc gaaaccggat gtcgggcgca aatttgaggt tcacccggcg
     5881 agcgacttcg ccgcgaagat agcgcttgtt gcgatcgagc gcggcgagca cgaccgcagc
     5941 atcctggccg ccgagcggca gtatgtagac ggttgccacc cgtaaatccg gcgacatacg
     6001 aacctccggt atcgtgatga ggtgcgtttc gatcaccgaa tcatggactt cgccgcgcgc
     6061 cagaatttcc gagagcgcgt ggcgaaccag ttcgccgacg cgcagcgagc gctgggaagg
     6121 tcccttggcg ggttcacggg catgaccgcg cgacatattc tttgaactca aagcgagcgt
     6181 tgcaccgtct ccacccggta acactcgatg acgtcgccga cccgcatatc ctggtaattc
     6241 tcgaaagaca tgccgcattc ttggcccgcg accacttccc tggcatcatc cttgaagcgc
     6301 ttgagctgtg acagcttgcc ctcgtggatc acgacattgt cgcggatcag gcgcacgttg
     6361 gcgccccgct cgacggtacc ttcggtgacc cggcagcccg cgatcttgcc gaccttggag
     6421 atgttgaaga tctccaggat gacggcattg cccagcatcg tctctcgcaa tgtcggcgcc
     6481 agcaggccgg acatcgcttt tttcacgtcg tcgacgagat catagatgat gttgtaatat
     6541 cggatttcga cgccatcgtg ctcggccatt tcgcgcgctt ccttgtgggc gcgcacatta
     6601 aagccgatga cggcagcacc cgaggcttcg gcgagcgtaa tatcggactc gctgatgccg
     6661 ccgacgcccg ccaggatgat ccgcgcccct acttccgcgt tgccgagttt ctcaagcgca
     6721 ccgacgatag cttcgaccga accctgcacg tcgcccttga cgaggagtgg aaattccttg
     6781 cgacccgcac tcttgagctg ggtcatcatc tgttcgagcg acccgcgcat gccactggcc
     6841 cgcgccgcca ccttttcgcg cctttgacgg gcgcgatatt cggtcacctc gcgggcccgc
     6901 gcttcacttt ccaccaccgc caagcggtca ccggcctccg gcgttccgtt gaaaccgaga
     6961 atctccaccg gagtggacgg gctggcgctg ttcaccgaca gaccggtatc cgacaaaagg
     7021 gcccgcaccc gcccccattc ggcgccggcg accacgatat cgccgttgcg aagcgtgccg
     7081 cgttgaacca gcactgtcgc caccggaccg cgaccacggt caagcttggc ctcgatcacg
     7141 gtgccttcgg ccggccgatc gggattggcc ttaagatcga gaatttcgga ttgcaatccg
     7201 attgtttcca acagcttgtc gagattgatt ttcttggtgg ccgaaacctc aacatcaagc
     7261 acgtcgccgc ccagcgattc gacctgtacc tcgtgctgga gcagttcggt tcgcacccga
     7321 tcgggtttcg cgtccggctt atcgatcttg ttgatggcga caatcatcgg gaccttggcg
     7381 gccttggcgt gttggattgc ctcgaccgtc tgcggcatca caccgtcatc cgccgccacc
     7441 accaacacca cgatgtcggt aaccttggcg ccgcgcgccc gcatcgacgt gaacgccgca
     7501 tggccgggcg tatcgatgaa ggtgattttt gagccgagcg tcgaggtgac ctgataggcg
     7561 ccgatatgct gggtgatacc gcccgcctcc ccgcccgcca cattagtggc acggatcgca
     7621 tcgagcagcg aggtcttgcc gtgatccaca tgccccatga tggtcacgac cggcggccgt
     7681 ggatacagca tggcgggatc gtcggcctta tcgaacagac cctcttcaac gtccgattcg
     7741 gcgacgcgac ggaccgagtg acccaactcc tcagcgatga gctgcgccgt atcggcatcg
     7801 atcgtgtccg tgatcttggc catttgacct tgtttcatca ggagcttgat cacatcaacc
     7861 gcgcgttcgg acatgcggtt agcaagctcc tggatggtga tcacctccgg gatcgtaact
     7921 tcccgcacca acttttcctt cggctcattg acggcatggc ccttaagcct ctgagtgcgg
     7981 cgacggaacg acgcgactga gcgttcccgc tcctcgtcgg ccgtgagcgc ggtgaccagc
     8041 gtgagccgtc cacggcgctt ctccgccccg ccacgggtcg gctttggggc cggggtcgga
     8101 cgcgccgcac cggtgccacg acgtgccggt cgcggcgctt cctcctcgtc gggttcttga
     8161 acaatattgc gcgcattgat cgccgccgcc gcgccgacgg ccggcgcggc agtcctcggc
     8221 ttggtttcgt catctccgaa acgtttcttg gcctcggtct ccgccttacg cctggtctcc
     8281 tcgtcgtggc ggcgacgctc gtcctcttcg cgcttgcgcg cctcggccgc ctcgcgttcg
     8341 gctcgctcgg ccgcctccct ctcctcgcgt cgacgggcgg cttcctcggc gatccgccgc
     8401 tcctcgatct cgctaacctt cgattctgcc agcgcatggg cgcgagcggt gcgctcttcg
     8461 tcggtcaact ggcgcagtac tacaccagat ggtttgccgc cggtaacatt cggcgccgct
     8521 gacggtgcgg ccacaccggt tgtcaaacca gcggcccccc tggtgcccgg cgcgccgcgc
     8581 cgcggcatgg atacggctgg cgttgaggcc ggcgcggcct cggtaacctt gccgtcaccc
     8641 ggccccacag tccgccgctt cactttttcg accacaaccg cttttgtgcg accatggctg
     8701 aagctttggc gcaccacccc ttgctcgacg ctgcgcttaa gcgtcaacgt cttggtcgga
     8761 gtgaccgtca aggtcttctc gccgggattc ttggtttcag tcattacgat cctgagtccg
     8821 gaataaagtc gcctggctgc cgtgagccaa gaccccgatc atccgggtca tcagctcgga
     8881 agtattcgag aaaccgccag cgtgcgagaa atgtctcgct cgcccgaccg gccagcagcg
     8941 ctgcatgtac cacatttagg cggcccaatg ccaaatccaa ttgagccgat cggaaagctt
     9001 cgacaatttt tcccttcgct gcatggtcca cgcgatgcct gaatgcggcc gcaagcttgg
     9061 gaccactttc tgccccggca tcccgggctc tgataagggc caccgggggg gccgccgccc
     9121 ctagggcggt ctcgaccctg gtaaagccca tgatcacgag ccccgccttg tgggcaatcg
     9181 acagggcatc aagcgccgat cgctccaaaa gccggtcaag cgtatctgta aggtcggtcg
     9241 gggcactgac gtcgacctta aggccacgcc cgaaggcgcg ccgctggacc gcctcctcaa
     9301 cgaggcggcg gcgggccgtg atccacacgc cccgtcccgg cagcctgcgc ttaagatccg
     9361 gcaccacggc accgtcggga ccggcgacga accgtatgag ttcgccaaca gggcgcactt
     9421 tgcgggttgc aatgcacaac cgctgggtca ccacagcagc ggctggcgac cctcggtcgg
     9481 tttcggcatc ctgcgccagt atttgcatca taccccgtca cattagctca aaccggttgc
     9541 tccgcggcgg cttcggtctc cgggggtgcc gcatgctggg cggcaaaatc ggcctccgtg
     9601 atccagccgg ccttgacgcg agcccgcata atgatctgct cgcattcctc gcgcgtaaga
     9661 tcaaagccat cgagaaaacc agggttgcga gtagcttcgc cgtccttgcg ctcggtccag
     9721 ccgacgagat cgtcggtggc acaccccgcg aggtcttcca cggtctttac gccgttctcc
     9781 cccagggcga ccatcatttt ggctgtgacc ccgggcacct ccttgagcgc gtccgcaaca
     9841 ccaagctcca atcgtttggc gtcatattcg gcctcgatct gagccaaata gtcccgcgcg
     9901 cgcgtctgca gctcgctggc ggtatcgtca tcgaagcctt caatcaaggc gatgtccttc
     9961 tggtcgacca cggagagctc ctcgacggag ttgaaacctt ccgatgccag cagctggccg
    10021 accacttcgt cgacgttgag cgcttccatg aacattttgg tgcgtttttc gaactcggcc
    10081 tgccggcgct cggattcttc ttgctcggtg aggatgtcga tatcccagcc agtgagctgg
    10141 gaggccagtc gtacgttctg gccacgtcgt ccgattgcca gcgacagctg ctggtccggg
    10201 accaccaccg agatgcgttc gcgatcctcg tcgagtacca ctttggcaac ctcggccggt
    10261 gccagcgcgt taaccacgaa ggtggcaaca tcgggcgacc acggaattat atcgatcttc
    10321 tcaccctgca attcgttgac gaccgcctgc acgcgggacc cccgcatgcc aacgcaggcg
    10381 ccaaccgggt cgaccgagga atcccgcgag atgaccgcga tctttgcgcg cgaacccgga
    10441 tcgcgcgcca ccgccttcac ctcgacgatg ccgtcgtaga tttccggcac ctcctgggca
    10501 aatagcttag ccataaactg aggatgcgtg cgcgacaaaa aaatctgcgg gccgcgcggc
    10561 tcacgccgca catcgtaaat gtaggcgcgg atacggtcgc cgttgcggaa caattcacgc
    10621 ggcaacagtt cgtcgcgcct aacgatcgcc tcgccgcggc cgagatcggc gacgacgttg
    10681 ccgtattcca cccgcttgac aatgccgttg acgatatcgc cgatccgatc cttgaactcc
    10741 tggtattggc ggtcgcgctc ggcctcgcgc accttttgaa cgatcacctg cttggccgac
    10801 tgggccgcga tgcgtccata ttcgagtggc ggcaacggct cagctatata atcgcccacc
    10861 cgagcagccg gattacgtcg ccgcgcatcc tcgacactga tgtggatcgc gtcattctcg
    10921 acttgatcga ccacaagcaa cagccgcgac agccgcatct caccggtctt cggattgatt
    10981 tcggcgcgca cttcggtttc gctgccataa cgcgagcggg ccgccttctg gatcgcgtcc
    11041 tccatcgcgg cgatgacgat gccgcggtcg atcgccttct cgcgggcgac cgcatcggcg
    11101 atctgcaaga gctcgagccg gttggcgctg acggccatcg atcattctcc ttcaggctga
    11161 ggcgctgccg gaggtgttcc ggaagcgcgt ttatttttca tgcgttgacg cgaagcgtga
    11221 tcgtagcgag gtctggattc gccgctacgg cgcaaggccg cccccacctc tccgtccccc
    11281 gctggtggtg aggacttgcc gcggcgtaat gccgccgcaa tgaggtcttc ggtgagaacg
    11341 agcctggcgt cggtcatatc gtcgaacggc aattgcgcat cggcggcgcc ttcggggccg
    11401 tcttccagcc gaacgtgggc tgccaggtta tcgatgccga cgagattgcc gcggtagcgt
    11461 cggcggccgt ccaacgcaac cgcaagttcg atcttcacga tttcaccgat gtgccgttcg
    11521 aaatcggagc ggcgtaccag cggtcggtcg agaccgggcg aggaaatctc gagccggtag
    11581 gcgggaccga tcggatcggc gacatcgagc accggcgaga tagcgcgcga caccgcttcg
    11641 cactcctcga tcgccatcgt gccgtcgggc cgctcaacca tgatctgcac ggtgcagccg
    11701 tcgagccccg acaccttcac acgcaccaac cgaaactcaa gatcgacaag caccggcgcc
    11761 actatcgcgg cgatgcgcga cgccagcccg gtttccgcaa ttaggcgcgg ctcagccagg
    11821 gcccttttgt cgatcggccc cgtgtcagtg acagggatcg tgtcggtcgt catggtacgc
    11881 gcagcttgcc tttcatcgcg ccgccgcgtt gccgatccgc aggcaacgca ggtaataaaa
    11941 aagagcgggt cccggccggg gcccactctc acgagccgat caaatgatac gatcgttatg
    12001 agatgtccat gtgacgcata cgaatatagc gcattacgac tttaacgcaa gggtcgttcg
    12061 ttcgcgaatt ttcgcgacct cgtttgccgc ttaggacagc gaggctgccg ttccttggcc
    12121 tgcaagcgcc cgcctaaacc tctttgcttt cccggcgtcg gcacctccct gaccaatagg
    12181 tccgcgcttt tcgcaaggtg cacgcgcaag ctatcgcggc cgtacggcga gaaagcagga
    12241 agcatgatga cgcggttcac ccgttgcggc gaaattccag atagcagggc gtccgccctt
    12301 ctcgctttgc ctttgcctcg taccgggtcc cccgaaagcc ggcccacggc tggcgccaat
    12361 catcggcacg ttccgcagtc cagacaaaat ccggcgcgtg caccaaatgc tcaagcgtcc
    12421 aggcggcata gtccgcaatg tcggtggcaa agcgaaacat acctccgggc tgcaaggcac
    12481 gcgccatcat cgcgacggtg cggttctgca cgaatcgccg cttccaatgc cggcgcttcg
    12541 gccagggatc aggatagagg agatcgatcc gggcgatcga ggcatccggg agccaagcca
    12601 agagatcgat ggcatcgccc gcgtagagcc tgatgttgtc cattgcgccc gcctcgatca
    12661 atgccaggat cttggccatg ccgttgacga agggctcgca gccgatgaag ccaaccgcgg
    12721 ggtgtgcggc agcctccgcg accaaattct cgccgccgcc gaatccaatt tcgaggtaaa
    12781 cagactccaa tggaagcgag aatgcatcca cgagacgatc cggaggcggc cggtcaagcg
    12841 cgagcgcaag tcgcggcaac aatgttgcca tgaggtcgac ttggcgagag cgcaacttat
    12901 gacccttgcg gcggccgaaa aaggcgcgct cgcgggatgc ggcataatca ttgtctttgg
    12961 gcatcgccat agcgaattgg caatcgcacc aggccgcagc aatccggttc ggttgactga
    13021 gagccccccc tcgcgcgatg tcggcgtagc tttcagttcg cggaacggcg caactcgtcg
    13081 acgagatcgg tgcgttccca ggaaaagccg ccatcaggct ccggcgggcg gccgaaatgg
    13141 ccgtacgcgc tcgtgcgcgc atagatcggc cggttgaggc taagatgctc gcggatgccc
    13201 cgcggcgaca aatccatcac ctcgtcgagc agtttttcga ggcgcgtctc ggcaacctgg
    13261 ccggttccgt agcagtcgac gtaaagcgac agcggcttgg cgacaccgat tgcatacgcg
    13321 atctggatgg cacagcggtc agccaacccg gccgcgacca cgttcttggc gaggtagcgc
    13381 gccgcatagg cggcggagcg atcgactttg gtcggatcct tgccagagaa agcgccgccg
    13441 ccatgcggag ccgccccgcc ataggtatcc acaatgatct tgcgtccggt aaggccgcaa
    13501 tcaccgtccg gaccaccgat cacgaacttt ccagtgggat tgacgtgcca aaccgtatgc
    13561 ttgccaatcc aacccggcgg taaggcctgg cggacatacg gttccacaat ggcctggatg
    13621 tcgtgggacg atagcttttc gtcgaagtgc tgggtcgaga caacgatctg agtggcttcg
    13681 accggcttgc cgctttcgta gcggatcgtc acctggctct tggcgtccgg accgagtgcc
    13741 tgggtttcac cggagcggcg cgcctgcgac atcgtcttga gaatgtggtg agcataatag
    13801 atcggcgccg gcataagttc cggggtctcc cggcacgcat agccgaacat gatgccctgg
    13861 tcgccggccc cctcgtcctt gttgccggcg gcatctacac cctgcgcgat atcgctcgat
    13921 tgcgcatgca aatgcacttc gatcgaggcc ttttcccaat gaaagccctc ctgttcatac
    13981 ccgatgtctt tcacggcaag gcgggcgaga tgggcgatgt agtcgcgcgt aatctgcgtg
    14041 ggaccgcggg tctcgcccgc aattatcacc cgattggtgg tcgccagcgt ttcacacgcg
    14101 accctgacgt gacgtgggtc ccagccatgg cgagggccga cttcgaagaa agcgtcgaca
    14161 acctcatccg agatgcggtc gcaaaccttg tcgggatggc cctcggagac cgattcgctg
    14221 gtgaatagat agcttgcacg cgacaagatg cacctccatg ggctcggtcc gcgcgatgag
    14281 ccgcgtggtc gggggccggc cggtgttctt gcagcgacgc cgcttgcggt caagagttcg
    14341 cttaacgggc cgccagagcc ttagaaaacc cgccaccaat ttccccaagc agaagggact
    14401 tacttgccgt cgccgtcatc gccagcaatc tgttgaacga gatcaacgat gcggcgccgc
    14461 aacttgggat ccggaatacg catgaacgct ttggtgagcg acaagccgtc ggaggtcgca
    14521 agaaaatcag acacatatgt gggtgaaggg gcgtcttcgg cgccttcctt aaaggtcccc
    14581 gacaagtgcg gcgcgccctc aaaaaagaac gcaacaggca cctggagaat ttgagaaatc
    14641 tgttgcaacc gactcgcacc aatgcggttt gtgccttttt catacttttg cacttgctgg
    14701 aaggtaagcg cgagcgcgtc gccgagcttt tcctggctca ttcccagcat catacgacgc
    14761 atccttaccc ggctgcccac gtgcttatcg atggggttgg gagctttctt cgtcattatt
    14821 gtgttctcct attatttctc cctacgtctt gggcttgatg taacagatca agcgcaaacg
    14881 cgatcggtca cctccggaca cgaagctcgg atgttaatac acaaaataat atagtcataa
    14941 catgaattta tttgtgtttt cattaagcac aatgcacttt catcaagtgt aatgcacttt
    15001 ttgtacaatt caactttcct tatgccccct ctctgttagt agccgtgtgt cgaatgctcg
    15061 cgtcttgaac gaatgagcaa gcttgcaaac atggtcccca gcaccgcaac aatgaacaac
    15121 gcgtcgccca ttcgcgcata aacagtgata tgggcagggc ggggtagagc cgaatccaac
    15181 aatccatcgt ggccaagtgg aagcgctgca atgacccttc cgagcgggtc aatgacagca
    15241 gaaaccccac tgttggccgc acgtatcagc ggcaatcctt cttcgatcgc gcgaaccttt
    15301 gcctgttgaa aatgctgata ggggccgacg ctgatcccaa accaagcgtc gttggtgagg
    15361 ttcaagagcc agccgggccg ctcccccttc ggaaccgctt cgccgggaaa aatgatttcg
    15421 tagcaaatga ggggcagcaa gtcgggggcc cccggaacgg cgatcttgcg ccttctctcg
    15481 ccgggcagaa atccacctgg cacattggtc aactgcgtca acccggcgcg ttcgagcaaa
    15541 tcctggaacg gcaagtattc gccgaacggc acgagatgga gcttgtcgta gctcgccaga
    15601 atggtgccgt tgtgatcgat cacatagatt gcgttatagg cgcgcacccc gcggcccggc
    15661 acaggctcgg cgcgccgcgc cgcgcccgtg atgagcgtgg tgttcggcgc taacatgtca
    15721 gcaatcatag aaagcgcatc aggctcgcgt gtcagaaaaa atggaaacgc ggattccggc
    15781 cagatcaaat gagtgacgcc gtctaagccg ccggtggtcc ggccctgcac ccccggtttg
    15841 cccgtgcgtt ccgacatctc gatgtaacgg ctcataatct gcggcttggc ggcgtaactg
    15901 aatctttcat cctgcggtat gttgggctgc atgatccgta agtgcacacc ctccaccacc
    15961 tcggtcgggt tacgggcaag tcgtaatccg ccgtatgccg caagggttgt gagtgcgcag
    16021 ccggccagta tcaccggcat ccaggattgg cgcgcgctgc ctacctcatc cgccaaaacg
    16081 gcaggactgg cgaacaccgc gattgcaaca aaggtcagac cccagatgcc gaaaatcgca
    16141 acgctctcgg caagcggcag tggcgttgtt aacgcatagc cgaaggcatt ccacggaaac
    16201 cccgtgaaca ggtggccacg cagccattcg gcagacgaca gcgctgcggc cagcgtcaat
    16261 atccgaaatc ggcccggagc ccacagcaac cgcgccacca cgaagccgcc tgccgtgaac
    16321 acggcaagtc cggctggtag catggtaacg gcgaacggca acaaccatcc gaacgtcttg
    16381 gcgtcgacca agaaagcaga tccgatccaa tagagtccgg ccaggaagta cccgaaccca
    16441 aaccaccatc cgatcgcaaa ggcagcctcg atgccgcgcc accgcgccgc cgcaacgccg
    16501 tcaagaagcc aaacgagcgg cggaaaagtc acaaacatca cgggccaaag attgattggc
    16561 gccagcgcca gggttgaggc ggcgccggcc agaaatgcca tcagcgccct gcgccagccc
    16621 cacgccagaa tgaccggttt ggccaggctg aaccaattca cggttgcgat ttcacttgcg
    16681 cttgcagcga actgtgctcg gcggcttccg gaacggaagt tggttcaccc ttttcggttt
    16741 gcggcacaat cggcgatgtg gccgcgcgcg aagccgcctc cggtcggcgg gcggcggggt
    16801 tgcgctcaac gctacgagcc gccggcttgc gcggatatat ccggacccgc ttcacgcgcc
    16861 ggggatcggc gtcaaggatc tcgatctcga acacacctgg gccaggtagc aactcgccgc
    16921 gcaccggcac cctgccaatc agcgtaacga tatacccgcc aatggtatcg acctcctcgg
    16981 cggcatcgcc aacgtcgaat tccgcgccga tcaccgcgac cgcctcgtcg aggctggcgc
    17041 ggccaaccgc cacgtaggac ccgtccggct cacgcacgac ggtgcgctcg gtggcttcat
    17101 cgtgctcgtc ctcgatgtca ccgacgatct cctcgacgat gtcctcgatc gacgcaagac
    17161 catcagtacc gccatattcg tcgatcacga gcgcaagatg aatgcgggtc gcctgcattt
    17221 tggccagcag gtcaatcgcc ggcatggacg gcggcacaaa caagatcgta cggatgatct
    17281 tcgtcgccga cagcggcatg tcgagatcga gggcggtaaa gtcgagacca gccagcaacg
    17341 gttccgtccg tgctgcgttc atttcctgat ggacggtggc gcgcgccgtc atgaacgcga
    17401 tgagatctcg aatgtggacc atccccaccg gctcgtcgag cgtatcgtta tagacgacga
    17461 ggcgagaatg gggcgcattc tcgaacatct tgacgagttc accgagcggg atgtcttgct
    17521 gcaccgccac gatatctgcc cgcggcacca taagatcgtc gagacgccgt tcacgcagac
    17581 taaggatgct tttgagcatt cggctttcgt ccggcgagaa gccggtctcg acagccgcgc
    17641 catcaaggag gaccttgagg tcagatcgaa tcgaggtggg actccagccg aacactgccc
    17701 gcatcatacg attaagccac gattcgcgat ttccacgtga gagcccgttc gaacgccggg
    17761 ccaattctgg aaaatcgcgc tgcccggcgg gagtggccac tgaatcagcg atcgttcgcg
    17821 cgttggtatc ggccatagca gataaatcag atgttggcat tgcgaagggc atagggatcg
    17881 gcgatgccga tccgcgcgag gatgtcacgc tccagtcgtt ccatccgttc agcctcgcaa
    17941 ttggtatgat gatcgtatcc taacaggtgc agaaagccat ggactaccag gtgagaaagg
    18001 tgcgagaata ccgtcttccc ttgctcgccg gcttcacggg cgagcgtttg gtacgctatc
    18061 gcaatatcgc ccagcggtat ctttccgtcc ggggaggccc cctgccgcgg tggtgccggg
    18121 aacgacaaaa cattggtcgg cctgtcttgt ccacgccagc gcgcattgag gcccgcaatc
    18181 attttgtcgt cgcatagcag cacagcgacc tcggcgttcc gatattgaac cgcgaccgtt
    18241 gacgtcgccg cgaacgcgat cgcccgtcgt acgatgtcct cagcttcggg cagcattcgc
    18301 catgcctccg attcgatcaa gacatcgatg gcgggatccg gttgaggact tgccgatggc
    18361 gaacttttca ttcctttccc ctgaggcggg gagggcgggc tgcgttatcg taggcggcaa
    18421 caatctttgc caccaactcg tggcgtatga cgtcctcatg ggtgaatacc acgcggccga
    18481 ttccgtccac ctcggcgagc aaccgcaccg cctcagcaag gcccgacgtc tggccgctgg
    18541 gcagatcgac ttggctcgga tcgcccgtga cgaccatacg actgttctcg cccaaccggg
    18601 tcaggaacat cttcatttgc atggaggtgg tgttctgcgc ttcgtccagg atgatgactg
    18661 cgttggcgag cgtgcgtccg cgcatgaaag ccaacggggc gatttcaatt tcgttcgtct
    18721 gcagggcgcg ctcgacaatg cgggagtcca tcaagtcgaa caaggcatcg tatatcgggc
    18781 gcaggtaggg atccaccttc tcgcgcatgt cgccgggaag gaaacccaac cgctcgccgg
    18841 cctccaccgc cggtcgcgac aggatgatgc gatcgacttc tttgcgctca aacaacgcga
    18901 tcgcatatgc cactgcgagc caagtcttgc cggtgccggc cggaccgacg ccgaacacga
    18961 gcgaattgcg gcgcaaagcc ctgatatagg cgtcctgacc ggcggtacgt gcccgcaccg
    19021 ggcgcttgcg cagattgatt tcctcaaagc tcgcgcgtga tgtcgccggg tcgaaatcga
    19081 acagcgagcc ctgtgctatg gcgagccgga tcgctccttc gacatcgccg gttgcgaggt
    19141 catgaccgcg cttgagctcg tcatagagcc cttccaaaac gtggcgagct tgctcgcatc
    19201 cgtcccgcga gcccgcgacc gtgacatggt tgccgcgctg ttccgccacc acgtcgaggc
    19261 ggcgctcgat cagtgcaaga ttttgtccat attgtccgaa caacgcggaa gccagacggt
    19321 tgtcgtcaaa tgccaccacg atctgagtcg cggtatcggc gctgaccgga tttgccatca
    19381 acgatccggc atcaggggca cgtcttgcca atgatctaac ctcctgcgcc ggccaatgcc
    19441 ggctcacggg cctgcgtgga acacaaggcc ccgaacagac tgttcgatcc aattccggtg
    19501 atttgcacgg tcgcgatttc accgatcaaa gatgacggcg ccatgacttg cacgggctgc
    19561 aggtacggcg atcgaccgac caattggccc gggattttgc caggcttttc gagcaacacg
    19621 tcaaggtttc gtcccatgca atttcgattg aacgcgctct gatgacggtc gatgcactct
    19681 tgcaagcggg cgagacgctc cgtcttgacc tcatcggcga tctggtcctg gcgatcggcc
    19741 gcgggtgtcc ccgggcgggg tgaatatttg aacgagaacg ccccagcaaa accaacttcg
    19801 tcgactatgc gcagggtatc gctgaaatcc tcttccgtct cacccggaaa accgacaatg
    19861 aaatccgacg tgaaggccat gtcgtgccgg gcggcgcgca gccgcgcgat agcatttagg
    19921 tattcggccc gggtatggcg ccggttcatg gcgaccagca tgcggtctga accggactgc
    19981 accggcagat gcaactgcgg catcagaatc gccagatcgc gatgggcggc aatgagacca
    20041 tcgtccacat cgcgcggatg gctggtggtg taacgaagcc gcagaacgcc cggcacttcg
    20101 gcaaggctgt tcatcaggtg accgagcgtc accggccgac cgttcgcggc ctcgccatga
    20161 taggcgttaa cgttctgtcc gatcagcgtg atctcgcgta cgcccgcgtt cgcgagattt
    20221 tccacttcgg cgacgatcgc cgcgaccggt cgcgacgcct cggcgccgcg ggtgtagggc
    20281 accacgcaga acgtgcagaa cttgtcgcag ccctcctgaa ccgtcacgaa ggcgctaaca
    20341 ccgcgagcac gaattgccgc cgccgtcgga ggcgtaaggt gagcgaactt gtcctcgatg
    20401 gggaactcgg tatccactac ccgggcgcca cgttcggcct gcgccagcaa cgccggaagc
    20461 cggtgatagt tttgcggtcc gatcaccatg tcgaccaccg gcgcgcggcg aacaatctct
    20521 tgtccctcgg cttgggcgac gcatcccgcc accgcaacaa tgactttgcg gccggcgcgt
    20581 gtcgcctcac gcttgagctt gcggatacgg ccaagttccg aataaacttt ctcggccgcc
    20641 ttttcccgga tatggcaggt gttgaggatg atgagatcgg catcctcggg agcggcggtc
    20701 tccatatatg aatcacgggt cagaaggtcg gtcatacgat tggaatcgta gacattcatc
    20761 tgacagccaa aagatttaac gtggagctta cgcaagcccg tgttgttcct gaaaatttta
    20821 caaacagccg cgatcagcca gcggcccggt agctcatata ggattttgca ccaaaaggga
    20881 aatgcctggg aaggcccatc aagtgtgggg cccgtgaagg acggttaggg ctttgcggtc
    20941 ttgctagcgc gttggttaga ggtggtttcc tcgagcccgc ggcggcgagg tgcgcggccg
    21001 gcgcagggct tgagggcacc atcaacccat gacactctca acccatgatt ttcttgcgcg
    21061 gatcgcttcg ggctcaattc gattgcaaaa tgcgatcgca ccgtttcatc ataggaggcc
    21121 gcgggtaggg cacttactac gggggccgtg attaagactc tcgcaggtgg tgggattaca
    21181 cccgaacgga tccccaccct tggcgcccgc ataggatctc aacccatcct tgccgcggcg
    21241 tgcaactgag caggcgttat ggagttcgat aattcattcg aggtgccgtt gcggatcgat
    21301 gaggcctgga aggtcctgat ggatatccgg cgcatcgctc cgtgcatgcc gggcgccgcg
    21361 ctcaccgacg tcatcgacga gcgcacctac aggggccgga tcggcgtgcg cctagggccg
    21421 gtcgcgctga ccttcgtcgg cacggtgaag ttcgaagagg tcgatgacgc caatcacaag
    21481 gcacgcgtcg ccgcccaggg caacgacgcc aagggccgcg gcgcagcgaa tgctatcgcc
    21541 tcgtttcatc tcgaaccggt gagcggcggc accaaggtgc tggtgcatac caatctcaca
    21601 ctctccggcg ccgtcgccca atacggccgc ggcgtcggca tcatccagat gacagcggca
    21661 cagatcatca cgcagtttgc caacaacatg aaggctcaac tggcgcagga cggcgtggcc
    21721 ggtgcgggtg ccgcatcaac cacgccgcca ccgcccgcat cagcgccccc cgcaccgacc
    21781 attcaatcga ccgcgcctgc gccgccgccg cccaccgcaa aaccgatttc cggcttcacc
    21841 ttgatggtga aggtattgtg ggtgtcgcta aagcgactat tcggtcgcgc ataacggata
    21901 tcagtccagt tcggagccca ctgacaactc gctgagggca gggaaaatag tagggagtgt
    21961 gcggattttt cggccatttt gtttggccgg ccgcaacaca gatgcctgcg gcagttccag
    22021 tgcgctgtgc acatattccc tggtcgcccg aacagggatt ctttcgtctg aacaggtctc
    22081 tgtcggaaca gggatttcgt cgcccccgtc acaacggcaa gacagcgcga ttgcggcggc
    22141 cgcgtcccgc gcggtgtcgc aagatcaagg aagccttggg catgacgacg catccggagc
    22201 cttaagaggg gtgatccagg cgcaacgtat ccgatacaat aggattacgt tatcggacta
    22261 ttaggcctat tgtccatgct gccatttgtc acgattattt gcgcggtacc gtccacagct
    22321 cgggggccag tcattgcgcg ccccgcaatg acaccgcctc gagccaatgc ccctggcctt
    22381 gcaacgatag cggcggctgg ttacgcatac gacgcggcat ccggatgaca ggaggaaccc
    22441 catgcgcgcg caatttctgg ccttcacgtt tctcgctgct gccgtggctt cgagcgctat
    22501 ggcccaacag gctgcttcgc caccgacaaa gaccttcatg aataacaaag agatcatggg
    22561 cctgatcgac aaagcgaagg ccgaccgcaa gggtgacgcc ccgctggtgg tcgagccgat
    22621 cctgtcgctt gcgccctatc gggcccagct tgaataccgt cccggcaagg cgccggcggc
    22681 gctccatgag aaggacgcag agctgatggt cgtgctcgaa ggcaccggtg aaatcgtgac
    22741 aggtggcaag ctcgccgatg agaagcgcac caatgcaaac aatctgagcg gctcgtcgat
    22801 cacagacggc aactctcagg ccgtcgtcaa gggcgacatg ctcatcgtcc cggctaacac
    22861 gccgcaccaa gtcatcccaa ccggcggcgc tccaatcgtc ctgatgacgt tgcatgtgcc
    22921 gcatccgccg accaattggc cgccggcgaa ttgaggcggt gcatagcggc ttccgggccc
    22981 gatttgacaa gtaaatggcc gtcatttcgg tgaacgtcag cgatctcgcc agtcccatcc
    23041 atcacatcaa gcgccgactt gccgcgctcg acgacggctg cggcgacgct gcgccagagg
    23101 cagctgccgc gctcgagcgc ttccaggccc gcgccggtgt gcgcctgccg cggcaatagc
    23161 gcgctctcct ggtatccgcc ggatgccggc gtgccttcta gggaatggtg ccgcccggcc
    23221 atgctgccga ttggacggac aaaccgccgc cgatcgcgca tctcgtcatt tcccattcgc
    23281 caaagagtga atttgggaag atgatcccga aatcagtcgt ccgggagaag agtggacggc
    23341 agggatgcac gtgaaatagg tcgcgagcat gctctgggac cgacgactgc gcgctcaacg
    23401 gcgggggatt accggcaaga agcgcgtgaa gtctgggcga ttggagatgt tgggttagcg
    23461 ctcgctgagg agggggcagc gacggcgcgc ttcggcgaat gcgaggtcgc tgttctatga
    23521 tcgcttcccg ccggtgtcgt gaagaacgat cgcatcaatt gcccgggaag gtcggacggt
    23581 gtatcggggt gagcgcacgc tacgccgttg ccggccaagg actttcagcc cggcgaaata
    23641 ggtatcgcta caatgaatcg gattggcaag tacttgcgcg ttgccccggc gttcgcggca
    23701 gcgctcgtca ctgcaaccgc ggcttcggcg gccaccgact gccgcacgtc gggcagtttc
    23761 gaaagctggc tcgcgcgctt caaggccgaa gcggcggcgc aaggcattgc caagagcgcc
    23821 atcgacaccg cctcgccgta tctcgtctac gaccagcgca tcgtcaatat cgaccgcggc
    23881 cagcgcatct tcgctcagag ctttctcgaa ttctccggca agatgctgcc cgcctaccgg
    23941 ctccagcagg gcgctgcgga aatccggaaa taccaggcga tcttcgatcg tgccgacaag
    24001 cagtacggtg tcccggccgc cgtcaccacc gcattctggg ggctcgaaag cgatttcggc
    24061 tccaacatgg gcagggatca ttcgatcaag tcgctggtat cgctcgccta tgattgccgc
    24121 cgcgccgaga tgttccgcgg ccatctgttc gacgcgctgc gcctgatcca gcgcggcgat
    24181 ctcaatgcgg ccgaaatgct gggttcatgg gcgggcgaac tcggacagac ccaaatgatg
    24241 ccgtccgaat acatcaaata cgctgtcgat tatgatggcg acggcaggcg caacctcctg
    24301 cgcagcgtgc cggatgttat cgggtcgacc gcgaactacc tcgtcagtct cggctggaag
    24361 cgtggcgagc cctggctgcg ggaagtccgc gtgccggaca acatgccgtg ggatcaggca
    24421 gacctcgcca ttcagcatcc gcttgccaaa tgggccgaat ggggcatcac gctgcccgac
    24481 ggccgaccgt tgcagcaaga aaatctccag gcttctctgt tgctgcccat gggtcggttt
    24541 ggcccgtcgt tcctggtgtt cgacaacttc caggcctatc tcaaatggaa tagttcgctc
    24601 gtctattcca ccacggcggc gtattatgcg gcacgcttgg ccggcgcgcc gccgatgcga
    24661 cgcggcaacg gcacgccgcc gccgccgctt gcgttcgagc aggcgcgcga attgcagcag
    24721 cttttgatca gggccggcta tgacgtgggt ggtgccgacg gcaagctcgg catctcgtcg
    24781 cggcaggcga cccgggcgat gcagatcaag ctcggtctgc cggcggactc ctatccaacc
    24841 gtggagctgt tggcgcgaat gcgcgccggg cggtaaggta ctaaggatgg gttgaattgc
    24901 gttcaactca ttcatccttg ctacacacca atatcattcg aacgcgaaac cgctgaattc
    24961 aggctttttc gatcggggcg aacggccggc cgcgcaacgc cgcgactgtc atggcgcgga
    25021 cctcgccttc gagccgccgt gccacgctct tgcgatcgaa aaattcgtca taggcgaccg
    25081 gatcacccca actcaccacg acgtcgatcg caccgcgcgc tatcaattgc cgcagatgcg
    25141 gcagcagcga tgccccaccg taccaagcca cacggcagcg gctttgtcgc ccgagcggca
    25201 gtccgagcat ggccgtgtag gcgactgaaa gaggctgaat ccaaacccgc ttgacatgct
    25261 cggtttcggc gatcgcgtct cgcgccgcgc cgatcagggc ggtacgaaat gggagcacgc
    25321 ggttgccgtc gcttgatgtt ccctctccaa acagcagaac cgggtcgccg tcggccagcc
    25381 gccgggcgat ttcgctgttc acgtctctgg tcttgtgccg tcgcgtacgg tcgacgaata
    25441 ccgagcgctg cagcttggcc aaaagcccga agatcggcca ggtcgaaacc tcgcgcttgg
    25501 caacgaacac aaccggcgcg gccgccgtga tgacggaaat gtcgagccag gacgtgtggt
    25561 tcgcaacgat caagaggggc ctatcgtcgc tttggcggcc caccgttgtg atgcgaatgc
    25621 ccagaaccca gcagacgatg ccgtgataga aggtcggaat gcggcggcgc atcggccagt
    25681 tcatgcgcac tgccagccac tgaaatggca gcagcgccag ggtgacgaca acgatcgccc
    25741 ccatgggaaa aaaagcccgc acgttcggtc tcggattatc cgtgcaagta tacggtcagg
    25801 gacgccacga cgtcagcctt tcgccttatc gtcgagcggc acggcataga gctcaagccg
    25861 atggtcgacc aagcgatacc caagttgacg tgcgacttcg gcctgcaaac gctcgatttc
    25921 caccgattcg aattcgatca cttcgccagt gcgcaaattg atgagatgat catggtggct
    25981 ctcacgcaat tgctcgtagc gcgcccgacc ggcacgaaaa tcatgtcgct cgacaatacc
    26041 ggcatcttcg aacagtttca cggtgcggta gaccgtcgag atcgaaatcc gactgtcgat
    26101 caaggcgcaa cggcgaaaca actcctcgac atccgggtga tcctcggccc ccgacaacac
    26161 gcgcgcaatg acccgtcgtt gctcggtcat gcgcataccc ctggcaacgc attgagcctc
    26221 gatatgactg agttgtaggt ccgtcatccc gaattccgtc acccggatgc cgcagcggat
    26281 cgggttggta gaaccattct aaagtgatga ccgaaattcg tctacctggt cggcatgatc
    26341 gacggaggcg agttccaccg tatgagcatt cacagtccac ccggcgtcac gtagcaatac
    26401 acctgtcgct gcggcccgat gaagatgatg ccgtgcccgg tgggattgcc gg
//
LOCUS       DATILV010000057         2858 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3080606, whole genome shotgun sequence.
ACCESSION   DATILV010000057 DATILV010000000
VERSION     DATILV010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2858)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2858)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2858
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3080606"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(164..1129)
                     /locus_tag="VLJ17_01325"
     CDS             complement(164..1129)
                     /locus_tag="VLJ17_01325"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HSV21650.1"
                     /translation="MKSVSKAVLILASLLFICAGTAGDSKTGDHALILGGGGPVGEAW
                     ESGVIAGLTEKGIDLSRADLIIGTSAGAIVGARLASRMPPSDLINAALAPSDGSPPGQ
                     PDQRSSSPPPDLSFLAAKLQEMDTGKGSQQSIRAEIGEWAQRVRPVVSESQFVASYHR
                     RFPEKEWPGRAYECISVDAADGSLRVWSGSSGVPLPVAVASSCALPGVFAPVTINSHR
                     YIDGGVRSVTNADLARGCKIALVLAPTMGPNDALAKSFTRPLNGELRTLGDSGCKVEL
                     IVPDDASLKAFGATLGDETHRAPAVNAGRVEGRNMAGEIAKLWSD"
     gene            1472..1993
                     /locus_tag="VLJ17_01330"
     CDS             1472..1993
                     /locus_tag="VLJ17_01330"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012708709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HSV21651.1"
                     /translation="MRRFWAALGSLLFFVIAPGTIVGLVPWSITDWQLRPAFFGFEAL
                     RLAGAALVLLGLILLVESFARFVWKGFGTPAPIAPPTKLVMTGFYRRVRNPIYVGLVT
                     IVFGEALILGDARLVVYAAILWLFFHFWVLVIEEPTLERSFGDEFANFKANVPRWLPR
                     LTPWAGSAKDQAS"
     gene            complement(1953..2180)
                     /locus_tag="VLJ17_01335"
                     /pseudo
     CDS             complement(1953..2180)
                     /locus_tag="VLJ17_01335"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
     gene            complement(2449..>2858)
                     /locus_tag="VLJ17_01340"
     CDS             complement(2449..>2858)
                     /locus_tag="VLJ17_01340"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSV21652.1"
                     /translation="GRVSSPLGAAYSASKFALEALTESLHLEVRHFGIRCVLIEPGTI
                     ATGIKPIEPHKGPADYAGLWEQWAGANTKMTGPSGTGPEVVALAIASAIEDPATPFRV
                     PVGQDAEMILGLRRSLDDQAFEDAMRKAVGLTW"
BASE COUNT          538 a          865 c          841 g          614 t
ORIGIN      
        1 cactccacca tcgtcagcat caacggcgag agcttccggc tcaaggacaa gcgcaaggcc
       61 ggactgctcg ctgctccggg caagatggcg aagcattaga gcagctcgtg gctcgttgcc
      121 agcggcgacg actctaatcg cggcagtcta acgccgcgct cattcaatcg ctccagagct
      181 tggcaatctc gccagccatg tttcgtccct cgacgcgacc ggcattgact gctggagcgc
      241 ggtgggtttc gtcccccaac gttgcaccga atgccttaag acttgcgtca tccggaacga
      301 ttaactcgac cttgcacccg ctatcgccaa gagtccgcaa ctcgccgttg agagggcggg
      361 tgaagctctt cgcgagcgcg tcatttgggc ccatagtagg tgcgagcacc agggctattt
      421 tgcaaccgcg cgcgagatcg gcgttggtca cggatcgaac tcctccgtcg atgtaccgat
      481 gactattgat cgtgaccggt gcgaagacgc ccggcagcgc gcaactcgac gcgacagcga
      541 caggcaacgg aacaccagaa gatccactcc acacgcgcaa agatccgtcc gcggcgtcga
      601 cgctgatgca ttcgtacgcg cgacctggcc attccttctc cggaaaccgg cgatggtagc
      661 tcgcgacgaa ttgcgattcg cttacaactg gacggaccct ctgcgcccat tcgccgatct
      721 cggcgcggat cgattgctgc gaccccttgc ctgtgtccat ctcctgaagc ttggcggcca
      781 ggaaagacag gtctggcggc ggactggatg acctctgatc gggctgaccc ggcggggaac
      841 catcggacgg ggcgagtgcc gcattgatta agtccgaggg cggcattcgg ctcgcgagac
      901 gggcgccgac gatcgcacct gcagaagttc cgatgatcag gtccgcacgc gacaaatcga
      961 tgcccttctc cgtcagtccc gcaattactc cagattccca agcttctccg accgggcctc
     1021 cgccgcccag gatcagcgcg tggtccccgg tcttgctgtc gcccgcagtt ccggcgcaga
     1081 taaagagaag agaggccagg ataaggaccg ctttagatac ggacttcatg gcccagattc
     1141 tgagcggagc atgcatcatc ggtactgatc ctcgctccga accagctatg cgcttaatcg
     1201 tcccgctgca agacattcac ccttcaccag ttcaaaacct cccagagtcg cgatccgatt
     1261 gcattctcgg caagtgttta acggaacggc cagggggaag gtcccctcgc gctccccctg
     1321 ttcacagccg cgctgggtgg gtcagtttta cttcggcgat ctcgcgaaaa ggtgggtcaa
     1381 cttttaaccg gcgttgacaa ggtcatgttc ctctataatg cagcagcggc cggcgcgccg
     1441 tgtcgcgcgc agattcctgg ggagaaatcg catgagacgg ttctgggcag ctcttggctc
     1501 cttgctcttt ttcgtgattg cgccgggaac gattgtgggt ctcgttccat ggtccattac
     1561 ggactggcag ctgaggcctg ccttcttcgg cttcgaggca cttcgcttgg caggcgcagc
     1621 gctcgtgctc ctcggtctta ttttgctcgt cgagtctttc gcgcgcttcg tgtggaaggg
     1681 ctttggaacg cccgcaccga tcgcgccgcc gacaaagctc gtcatgaccg gtttctaccg
     1741 gcgcgtacgc aatccgattt atgtcggcct tgttacgatc gtcttcggtg aagcgctcat
     1801 tcttggcgat gccaggctcg tcgtctatgc agcaatcctc tggttgtttt ttcacttttg
     1861 ggtgctggtc atcgaggaac ccacgctcga gcgctcattt ggcgacgagt tcgcgaactt
     1921 caaggccaat gttccgcgtt ggttgccacg gcttacgcct tgggcggggt ctgcgaaaga
     1981 ccaagccagc tgaggatcgc gtcgcggttg gcgtcgagat cgggcgcagg cgcacgcgac
     2041 ggtggatcgt cgtaagccga gagcttgatc ggattgcctt gcatcttgat cgggcccagc
     2101 tcggggtctt ccgcactcac gaccatattg cgcgcctgaa cctgcgggtc cgccaggacg
     2161 tcggcgacgt tgttgagcgg accgcaagga acctctcaaa gatcaattca gcctagaact
     2221 aggcagggct ttagcggcgt ggagttattt ggaaactggt ctagcgacgt atttccagcg
     2281 cctcacacag atgcatgaag tgtcagcgcg tcgcgttttc tactcaatag gaggatttga
     2341 tggcagaaag cgcgccctca tggcggtcat tggttgggtt aagacccaac cagacataac
     2401 cccttaaccc cttcccacag aggagagggc agtgaggctt gcatctcatc accacgtaag
     2461 cccaacggcc tttctcatgg catcttcgaa tgcctgatcg tcgaggcttc ttcgcaagcc
     2521 caaaatcatc tcagcgtcct ggccgaccgg tacacggaaa ggtgtcgcgg ggtcttcgat
     2581 tgcactggcg atggccaatg cgacaacttc gggtccggtt ccagatgggc ccgtcatttt
     2641 ggtattggct ccggcccact gctcccaaag tccggcgtag tcggctggtc ccttatgagg
     2701 ctcgatcggt tttatgccgg tagcgatggt tccgggctcg atcaacacgc agcgtattcc
     2761 aaagtgacgg acttccaggt gcagtgactc cgtcaaggct tcgagcgcga acttggaggc
     2821 gctgtacgct gctccgagcg gcgaggagac ccggccgt
//
LOCUS       DATILV010000058         8179 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4357899, whole genome shotgun sequence.
ACCESSION   DATILV010000058 DATILV010000000
VERSION     DATILV010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8179)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8179)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8179
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4357899"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            407..715
                     /locus_tag="VLJ17_01345"
     CDS             407..715
                     /locus_tag="VLJ17_01345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018646242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1272 domain-containing protein"
                     /protein_id="HSV21653.1"
                     /translation="MLKLRPNCEYCDKDLPPQAMEAKICSYECTFWADCVEMVLFNVC
                     PNCGGGFVPRPIRPTTERRDGVSLARDPASTERVHLKWDRGELPAFIASVCSIAPERR
                     "
     gene            complement(733..1701)
                     /locus_tag="VLJ17_01350"
     CDS             complement(733..1701)
                     /locus_tag="VLJ17_01350"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV21654.1"
                     /translation="MKPPFIKAVTIAAAALAGSTATVGAQEAYPTKPIHFIATEVLGS
                     ATDIQARIIAKGMAPLLGQPIEIENIFGEPGLQRAIKSAPDGYTVVYGGAGTLALLPH
                     IKKVSFDPLRDLTPVGRFVISPTLLAVNPSLPVKNVEELVALMKANPGTLKMSTAGAG
                     TTGHFAGEMFIAMASVKPIVVHYPGGGPAIDAVVNNDSQWTMAPIAGRLPHVRTGKLR
                     ALATGGTTRLPALPDVPTVAESGYPAYNAVGWAGIYVPNGTPQPIIGKLNAAIVEAVA
                     LPEVKKEFAEQGVEGASSTPAEVAKMLQDDYVHLGELARSIGVRAQ"
     gene            2172..2531
                     /locus_tag="VLJ17_01355"
     CDS             2172..2531
                     /locus_tag="VLJ17_01355"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSV21655.1"
                     /translation="MRAQSREQRPPAFTQEQVERGKSIYQKNCQDCHGSTLDNGEFGG
                     APLKGAYFRQHWGSGDVSALFGYVNTLMPPDRPGQLSPQSYADLTAFLLSNNGYAAGT
                     EELTADEDAQRKMTMKK"
     gene            2560..3171
                     /locus_tag="VLJ17_01360"
     CDS             2560..3171
                     /locus_tag="VLJ17_01360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21656.1"
                     /translation="MIDLTLQQLVLRLIAYALIAAVHGLAVAAAAIAMGDQGPRHDGR
                     LRVNPVAHLDIIGTVSAVLFSVGWIRPIAIDPVRLRFGRVGLVVVVAAGAAATLLSAL
                     ALRLVRPLLLPLLPDTASVTVFGLIEIVGELSAWFALINILPLPPLTGAHLLTAAVPA
                     CDKVIARITPYAGFALAVIAATGVFAKTLAPGYRILRGLVLGA"
     gene            3624..5918
                     /locus_tag="VLJ17_01365"
     CDS             3624..5918
                     /locus_tag="VLJ17_01365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HSV21657.1"
                     /translation="MHELAESQRPNTYVGAPVERVEDLRFLRGRGCYLDDLSRSGQWH
                     AAFVRSPFAHGTIRRIDTRAARAKRGVRAVITGGDIGPAIPTIPFRRPNPTIAPYGQP
                     VIATEVVRYVGEPVAMVLADAPELAEDASLAVELDIAPLAVVIDRRAAVAGDTLLFPA
                     TTSNCATTFTAAIGDVEVAFRDAPYTRRDSLRVQRQTAFPMETRGLLAEWDGRRLTVS
                     GAAKLPFFNRRALAAMMGLPDTAVDYIEYDVGGGFGARGEFYPEDFLCAFAARRYGHP
                     IKWVEDRREHFMTIAHAREAEGDIEIALERDGTIRGIRGEIFVDIGAYVRPNGTTPVR
                     NVAQFLAGPYRVPHLRLQAHAMVSNKTPTGTFRGPGRFEGAFFCERLLDLAAGDLGLD
                     RLDIRRRNLLTATEMPYRLAPIVPDDGLGKTQCDSGDYTRTFDLCIAEFGWAEKVRLN
                     GRLIEGRYHGVGVACFIEGGGSGPREHARMEVEPDGTVAVYVGSSAVGQGVETIMGQI
                     AADALHVPMSRVRVLHASTTYLRDGVGSFGSRATVMGGSAIVDAANNLLDALRAAAAT
                     QLDVPPQELRLGDGIVQTGDGRGVTWAELAHAHLCVEGVFQSSRPTYSYGTAAVHVAV
                     DPRTGHVEILDYLVVDDVGRIVNPLTLHGQVIGAAVQGCGTVFGERLAYDADGQLLVA
                     SLADYLVPLAADYPNLRAVSLEEYPSPNNPLGVKGSGEGGIIPVGGAVANAVAAALSA
                     FGVEPRELPLSPPAVWQLIEQARA"
     gene            6056..6763
                     /locus_tag="VLJ17_01370"
     CDS             6056..6763
                     /locus_tag="VLJ17_01370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21658.1"
                     /translation="MNVGCVCGIGLSLALAINSAAGAGPDISATYWATSYSPNIQVLG
                     GGEPPLNAVGKAAYEMNRAGLKDGSIVDKARRVCVPDGVPRVLASPYPFEIFQVPAGQ
                     VTFLFEMNHQVRVIVMDKPLPSPHTLLVDPKYNGHSVGHWDGDTLVVESAGFNERTFL
                     DASGLPHSDGMTTVERIRKVGNQLEDIISIHDPAMYERDWQARFVYDERNDVRLEDYA
                     CNDKHRDLSGVKGIGVR"
     gene            6786..6944
                     /locus_tag="VLJ17_01375"
     CDS             6786..6944
                     /locus_tag="VLJ17_01375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21659.1"
                     /translation="MGAALAQSSGESGNLGSIAGIPGSLAYAGDDIGADTAAASARLP
                     LDVKGRSP"
     gene            6941..7867
                     /locus_tag="VLJ17_01380"
     CDS             6941..7867
                     /locus_tag="VLJ17_01380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21660.1"
                     /translation="MTTALRRMRSTLTGAIMLGALCGPAALPSVLAAEAPGTGAPPNL
                     DLSAPGVAWAGFAAPKEPNYAIARLFNDFANPATGVGPVTDGPAHPYVNNEVAREMRI
                     QPTYRVADLDNAAGKNLLPWVREALAKQNELALRGRNGETREARCWETGVPAFHLNPG
                     LMHIIQTPREVVLFLTGRARHIWLNVPHSANPKPSWYGESVGRYDGDTLVVDTIGLND
                     RTFVDSYRTPHTDKLHVIERFRLIDGGNRLEVAFTVEDPGAFYQPWSGTRNRHRVVNP
                     NVKPAEFDCAAFNDDYFNIGLEPVPTAQKVDF"
     gene            complement(7904..>8179)
                     /locus_tag="VLJ17_01385"
     CDS             complement(7904..>8179)
                     /locus_tag="VLJ17_01385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HSV21661.1"
                     /translation="QRTAKFVDAFFSKFSEFHKPPRHPLWKVVNLAATIPGWTRFAAA
                     EEWLRNSQAGQAKGPEVVKELMGDQPSKRTEEELYREFLMWRNRREK"
BASE COUNT         1424 a         2540 c         2585 g         1630 t
ORIGIN      
        1 caagagtttt gatcatcaac gaatcatgcc aaaaatatat cgtgtttacg gaaccttaat
       61 gccgcatttt ggcggacgcg tgcgattttg gcaggccatg aagggcgtgg cgcgtcgctg
      121 cgcaacaaga ggaattattg acgtctctta atcccatgtc tgcggcataa ctctggtgta
      181 agcacggctg caagtatgcg gtaagttcca aggagccatg cgccaggcgt atgacttaga
      241 tctgaatttt tcaggcgagc attcctcacg ggtttaagcc gcacgtcggc ctccgcgaat
      301 tggttgttat ggttatccct aagattattc cgtttatcga tttcgatcga cccgcgaagc
      361 cgggcggcac accgcacgta ccgcatgccg gcgacaggag accgtaatgc ttaagctcag
      421 gccgaattgc gaatattgcg acaaggacct ccctccgcag gcaatggagg cgaaaatctg
      481 tagctatgaa tgcactttct gggccgattg cgtcgagatg gtgctgttca atgtctgccc
      541 gaactgtggg ggcggatttg ttccccgccc gatccggcca acgaccgagc ggcgcgacgg
      601 cgtctcgctc gcgcgggatc cggcctcgac ggagcgggtg cacctcaaat gggaccgcgg
      661 cgagttaccc gccttcatcg cgagcgtttg cagcatcgct ccggagcgtc gatagtgcgc
      721 ccgcccgcaa cgtcattgcg cccgcacccc gatgcttcgc gccaattcgc cgagatgcac
      781 gtagtcgtcc tgcagcatct tcgccacttc cgccggcgtg ctgctggcgc cctcgacgcc
      841 ctgctcggca aattccttct tgacctccgg cagggcgaca gcctcgacga tggcggcgtt
      901 gagcttgccg atgatgggct gcggcgtgcc gttcggcacg tagatgccgg cccagccgac
      961 tgcgttgtaa gccgggtatc cggattccgc gactgtgggc acgtccggca gtgcgggcag
     1021 acgggtcgtc ccgccagtgg caagcgcgcg caacttccca gtacgcacgt ggggtaggcg
     1081 gcccgcgatg ggtgccatgg tccattgcga gtcgttgttg actaccgcat ctattgccgg
     1141 gccgccgccc ggataatgaa ccacgattgg ctttacgctg gccatggcga tgaacatctc
     1201 gccggcgaag tgaccggtcg tgccggcgcc cgccgtcgac attttgagcg tcccaggatt
     1261 ggccttcatc agggcaacca gttcctccac gttcttgacc ggcagcgacg gattgaccgc
     1321 aagcagcgtt gggctgatca cgaagcgtcc gaccggggtg agatcccgca acgggtcgaa
     1381 tgacactttc ttgatgtggg gtaacaacgc cagtgtcccg gcgcccccgt agaccacagt
     1441 gtagccgtcg ggtgcggatt tgatcgccct ctggagtccc ggctccccaa aaatgttctc
     1501 gatctcgatc ggctgaccaa gcagcggggc catgcccttg gcgatgatgc gcgcctggat
     1561 gtcggtcgcc gaacctaaaa cctcggtggc gatgaaatgg attggcttgg tcggataggc
     1621 ttcctgcgcg ccgaccgtgg cggtcgaacc ggcgagcgcc gcagccgcga tggtcaccgc
     1681 cttgatgaat ggtggtttca tatccttaac cttccgatgt gcgtttgctg ccgatttccg
     1741 atacaaatcc tcgccctgct ggcgtgcaaa agcaagccgg gcgcgcgatc cagcactgct
     1801 ggttgcagag ttgcccgatt cagtggaaca tgccggcaaa gcgccagttt agttctgtgc
     1861 tggaaatttg cacatctggc gctacatatt tgccagcgcg cggcattcgg agtgcctttg
     1921 tcatgtccat gtgcgatctg atcgaaagta taagagcccg tcccgctgac atccggccga
     1981 cgtcagtgcc gggcacgaca cagcaaacca tccgtctgcg aagaagacga acccgcgggt
     2041 caaaccagtg ggtgacgggt gaagggtgga tcaacgtcac gggggcgcgc tctagcttgg
     2101 gcaagttcat tcgtccgact atgctgtttc ttgtcgggtt ctcaatcgca acaacagccg
     2161 gcaccccaac catgcgcgcg cagagccgcg agcagcggcc gccggcgttt acgcaagagc
     2221 aggtggagcg cggcaagtcg atctatcaga agaactgcca ggattgtcac ggctcgaccc
     2281 tcgacaacgg tgagttcggc ggtgcaccgc ttaaaggcgc atatttccgt cagcactggg
     2341 gctctggcga cgtctcggcg ctgttcggtt atgtcaacac gttgatgcca ccggaccgac
     2401 ccgggcaact cagcccacaa tcctatgcgg atttgacggc ttttctcttg agcaacaacg
     2461 gctatgcggc cggcaccgag gaactgaccg ctgatgagga cgcacaacgc aaaatgacca
     2521 tgaagaaata ggtgcgagcg aagaccggac ggtggcggcg tgatcgattt gacgttgcaa
     2581 caactggtgc tgcgcctcat cgcctatgcg ctcatcgcgg ccgtccatgg ccttgcggtc
     2641 gcagccgccg caattgcgat gggagatcag gggccacgcc atgacgggcg gctgcgcgtc
     2701 aaccccgtag cgcatctcga tattatcggt acggtgtccg cagtgttgtt ctcggtcgga
     2761 tggatcaggc cgatcgccat cgatccggtc cggttgcgtt ttggccgcgt tggattggtc
     2821 gtggtcgtcg cagctggtgc cgccgctact ctgttgagcg cactggcgct gcggcttgtg
     2881 cgtccgctgc tgttgccgtt gctgcccgat acggcctccg tgaccgtctt tgggctcatc
     2941 gaaatcgtgg gagaactcag cgcgtggttc gcgttgatca acatcctacc gctgccgcct
     3001 ctgacgggtg ctcatttgct aacggcggcg gtgccggcat gcgacaaagt cattgccagg
     3061 atcacaccct atgccggatt tgcgctcgcc gttatcgccg ccaccggggt gttcgccaaa
     3121 acgttggctc cgggctatcg gattctcagg gggctggtcc ttggggcgtg acgcgacgtg
     3181 gccgtcgcgg atctggtaag atgtgtcggg gggccagcga gagtgaggta catgacccgt
     3241 tttgccattg cgtccctgat gctggcgggc agcgccatgc tggtgctcga agcggcctac
     3301 ggccaaggtg tgcaacatca attcaccccc ccgccgccga taacggcatt gccgtcatca
     3361 tcatcgccga gctatccgcc aatccccggg gtggcgccgc cagcgccggc gccgcggggg
     3421 tcgcacttga ctccttaccg tgttacgccg tcagtcgggt cgcctgggca gggggccaat
     3481 cgttccgttt atactgccca cggacgaagg gtcctggtgc cgacttcgcc ggctgagact
     3541 ttcggcgacc gcgtttccaa ctgtgctcac gccggtgcat ccgccgggtt gggccccaat
     3601 caactgggcg cattcatggg ccgatgcacg aattagcaga atcgcagcgc cctaacacct
     3661 atgtcggggc gccggtcgag cgcgtcgagg acttgcgttt cctgcgtggg cgcggctgct
     3721 atctcgacga tctttcgcgc tccggccagt ggcacgcggc gttcgtgcgc agcccgtttg
     3781 cgcacggcac cattcgacgg atcgacaccc gtgccgcgcg ggcaaagcga ggcgtgcgcg
     3841 cggtgatcac gggcggcgat atcggccccg cgatccccac cattccgttc cgccggccaa
     3901 acccgaccat tgcgccttat gggcagccgg tcatcgcaac ggaggtggtg cgctatgtgg
     3961 gcgagcccgt cgcgatggtg cttgccgacg cgccggagct tgccgaggac gcgtcgctcg
     4021 cagtcgaact cgatatcgcg cccttggcgg tggtcatcga tcgtcgcgcc gccgtggcgg
     4081 gtgacacctt gttgtttccc gctaccacga gcaactgtgc caccaccttc acggctgcga
     4141 tcggcgatgt cgaagttgcg tttcgcgacg ccccgtatac gcggcgggac tccttgcggg
     4201 tgcagcgcca gaccgcgttt ccgatggaaa cgcgcggact gctcgccgag tgggatggcc
     4261 ggcgccttac ggtgtcgggc gccgccaagt tgccgttctt caatcgccgt gcccttgccg
     4321 ccatgatggg gctgcccgac actgcggtcg attacatcga atacgatgtc ggcggcgggt
     4381 tcggggcacg cggcgagttt tatccggagg atttcctctg cgcgttcgcg gcgcgccgct
     4441 atggacaccc gatcaaatgg gtcgaggacc gccgtgagca tttcatgacc atcgcgcatg
     4501 cgcgcgaggc ggaaggcgat atcgagatcg cactcgaacg cgacggcacc atccgaggca
     4561 ttcgcggcga gatctttgtc gatataggcg cctatgtacg cccgaacggc accacgccgg
     4621 tgcgcaatgt ggcgcagttc ctcgccgggc cttaccgcgt gccccatttg cggcttcagg
     4681 cccacgccat ggtgagcaac aagacgccga ccggaacctt ccgggggccg ggccgcttcg
     4741 aaggcgcctt tttctgcgag cggctcctcg acctcgcggc gggcgacctt ggcctcgatc
     4801 gcctggacat ccgtcggcgc aatctcctca cggcgaccga gatgccctat cggctcgccc
     4861 cgatcgtacc cgacgacggc ctcggcaaga ctcaatgcga cagcggcgat tacactcgca
     4921 ccttcgacct gtgcattgcg gagttcggct gggccgagaa ggtgcgcctg aacggacggt
     4981 tgatagaggg ccgctatcac ggcgtgggtg tcgcctgctt catcgaaggc ggcggttcgg
     5041 gtccgcgcga acacgcccgc atggaagtcg agcccgacgg cacggtcgcg gtctatgtcg
     5101 ggtcgtccgc ggtcggccag ggcgtcgaga ccatcatggg acagatcgcg gccgatgccc
     5161 tgcatgtgcc gatgtcacgg gtcagggtgc tgcatgcctc taccacctat ttgcgcgacg
     5221 gcgtcggctc cttcgggtct cgcgccacag tgatgggtgg ttccgccatc gtggatgcgg
     5281 ccaacaatct gctcgatgcg ctgcgtgccg ccgctgcaac gcagctggat gtgccgccgc
     5341 aggaacttcg gctcggcgat ggcatcgtgc agactggcga cgggcgcggc gtgacctggg
     5401 cggagcttgc gcacgcacac ctctgcgttg aaggtgtctt ccagagttca agaccgacgt
     5461 acagctacgg tacggcggcc gtgcatgtgg cggttgatcc ccgcactggt catgtggaga
     5521 ttctcgacta tctcgtggtc gacgatgtcg gtcgtatcgt caacccgctg acgctccatg
     5581 gccaggtgat cggcgccgcc gtgcagggct gcggcactgt gttcggcgaa cgtcttgcct
     5641 atgatgcgga cggccaattg ctggtagcat cacttgcgga ttacctagtg ccgctcgctg
     5701 ccgactatcc gaacctgcgc gcagtgtcgt tggaggagta tccatcaccc aacaatccgc
     5761 tcggcgtcaa aggttccggt gaaggcggca tcattccggt cggcggtgcg gtcgccaatg
     5821 cggtagcggc ggcgctcagc gcattcgggg tcgagccccg cgagttgccg ctatcgccgc
     5881 cggcggtgtg gcagctcatt gaacaggcgc gcgcgtgagg cggttctggg tgggcaccgg
     5941 cagcgagtcc cccgcaagcg gggagaagga caaaggctgc gcctattgcg gtcccgcctg
     6001 gccgcgagtt acaaacctcc aaagtcgtaa aaattgcggg ggaggcgcgt gctctatgaa
     6061 cgtcggttgc gtttgcggca ttggcctttc gcttgcgctg gccatcaatt ccgccgcggg
     6121 cgccgggccg gacatctccg caacctattg ggcgaccagc tacagcccga atatccaagt
     6181 tttgggcggc ggcgagccac ccctcaacgc cgtcggcaag gccgcctatg aaatgaatcg
     6241 ggcgggcttg aaggacggtt ccatcgtcga caaggcgcgc cgcgtctgcg tgcccgacgg
     6301 tgtgccgcgc gtgctcgcct cgccctatcc gttcgaaatc ttccaggtgc cggcgggcca
     6361 agttacgttt ctctttgaga tgaaccatca ggtgcgcgtg atcgtcatgg acaagccatt
     6421 gccctcgccg cacaccttgc ttgtcgatcc taaatacaat ggccattcgg tcggccattg
     6481 ggacggcgac acactggtgg tggaatcagc cggcttcaac gagcgtactt tcctcgatgc
     6541 gagcggtctg cctcacagtg acgggatgac caccgtcgaa cgcattcgca aggtcggcaa
     6601 ccagctcgaa gatatcattt cgatccacga tccggcgatg tatgagcggg attggcaggc
     6661 gcgtttcgtt tatgacgagc gcaacgacgt gaggcttgaa gattacgcct gcaacgacaa
     6721 gcatcgtgat ctgtccggcg tgaagggcat aggggtccgt tgatctttga gcggatttcg
     6781 gtggaatggg cgctgcgctt gcccaatcct ccggcgaaag cgggaacctc ggcagcatcg
     6841 ccgggattcc cggctcgctc gcctatgcgg gtgacgacat cggtgcagat actgctgcag
     6901 ccagcgcgcg cttgccgctt gacgtgaaag ggagatcccc atgacaacag ctctgcggcg
     6961 catgcgcagc acgctcaccg gcgcaattat gctcggcgct ctgtgcggtc ccgcggcgtt
     7021 gccctctgtc cttgcggcag aggcgccggg aaccggagcg ccgccgaacc tcgacctttc
     7081 tgcgcccggc gtcgcctggg cggggttcgc ggcgccgaaa gagcccaatt acgcgattgc
     7141 gcgtctgttc aatgattttg ccaatccggc gaccggagtg gggccggtga ctgacgggcc
     7201 cgcccaccct tacgtcaaca acgaggtggc gcgggagatg cggatccaac cgacctatcg
     7261 ggtggcggac ctcgacaacg ctgcgggcaa gaacctcctg ccgtgggtca gggaagcgct
     7321 cgccaagcag aatgaactcg cgctccgggg ccgcaatggc gagacgcggg aggcgagatg
     7381 ctgggagacc ggcgttccgg ccttccatct caacccaggc ctcatgcata tcatccaaac
     7441 gcccagggag gtcgtgctgt tcctgacggg acgcgcccgc cacatctggc tcaacgtgcc
     7501 gcattcggcc aacccgaagc cgtcctggta cggagaatcg gtcggccgct atgacggcga
     7561 taccctggtc gtcgatacaa tcggccttaa tgacaggacc ttcgtagatt cctaccgcac
     7621 gccgcacact gacaagctgc atgtgatcga gcgattccgg ctgatcgacg gcggcaatag
     7681 actcgaagtc gctttcacgg tcgaagaccc cggcgccttc tatcagccct ggtcgggtac
     7741 gcggaaccgc caccgcgtgg tgaatccgaa cgtcaagccg gcggagttcg attgcgcggc
     7801 cttcaacgac gattatttca acatcggcct tgaaccggtg ccaactgcgc agaaggtgga
     7861 tttctgaatc cgggttgcac agctcccctg catgcgtcgc accttatttc tcccttctat
     7921 tcctccacat caggaattca cggtagagct cctcttctgt ccgtttcgat ggttgatcgc
     7981 ccataagctc tttgaccact tccggacctt tggcctggcc agcctgcgag tttctgagcc
     8041 attcctcggc agccgcaaaa cgggtccatc ccggaattgt cgcagccaag tttaccacct
     8101 tccaaagcgg gtgacgcggc ggcttgtgga actcgctgaa cttcgagaag aatgcatcga
     8161 cgaattttgc agtccgttg
//
LOCUS       DATILV010000059         2152 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1547640, whole genome shotgun sequence.
ACCESSION   DATILV010000059 DATILV010000000
VERSION     DATILV010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2152)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2152)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2152
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1547640"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..504
                     /locus_tag="VLJ17_01390"
     CDS             <1..504
                     /locus_tag="VLJ17_01390"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HSV21662.1"
                     /translation="QIISEEIDATVQGYRGQVNHSIFTGGSKTPGYDYYRTAMDAAIK
                     LFHECIAFIVPGKTTCGQLVDYYAQLAEKLDAEDRSGVVLHSSGIANLSRPRLGSSNS
                     RGESDIVLAPGMTFDFKPAIRMKRSAAQDVRKENRSVQIGEHVLVATASVSRLGKREL
                     KPLTTES"
     gene            672..1364
                     /locus_tag="VLJ17_01395"
     CDS             672..1364
                     /locus_tag="VLJ17_01395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010914190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VIT family protein"
                     /protein_id="HSV21663.1"
                     /translation="MMDQDDDDPTNRLAWLRAAVLGADDGIVSTAALMVGVAASNASP
                     QAVLTAGLAGLVAGAASMAAGEYVSVSSQRDLEQALRERENSLAKAYPNVALTELAIA
                     LQLQGVDPGLARKVAYEISAAEPIGANVRVKYGISERTAARPLQAALASAVSFAVGAI
                     VPLLGMLAHTPAARIQLTITLALFALAVCGALAAGAGGASRLRGSLRVVLGGGLAMAI
                     SALIGRIVGIVV"
     gene            1469..>2152
                     /locus_tag="VLJ17_01400"
     CDS             1469..>2152
                     /locus_tag="VLJ17_01400"
                     /inference="COORDINATES: protein motif:HMM:NF013648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV21664.1"
                     /translation="MRICSLLPSTTEIAFALGLGDQVVGVTHECDYPPEAEKKPVVVR
                     SAIDSHRLNSSEIDHRVGELLQTGKSLYTIDDEAFKAAAPDVILTQALCDVCALDYNE
                     VVKAAQRLPCKPTIVSLIPHCLTDVLDDILRVGEATQRHREAETLVLDLRRRIEAVRQ
                     RSARSSSRPRIACIEWFDPIYAAGHWVPEMVELAGAHDGLARKGEPSEKFQWTEILKF
                     QPEIVVLMPC"
BASE COUNT          449 a          617 c          617 g          469 t
ORIGIN      
        1 caaatcatca gcgaagaaat cgacgccacc gtccaaggct atcgcggaca agtaaatcat
       61 tcaattttca ccggcggatc taaaactcct ggatacgact actatcgaac cgcgatggac
      121 gctgccatca agctattcca cgaatgcatt gccttcattg ttccgggcaa gaccacgtgc
      181 ggtcagcttg tcgattatta cgcgcagttg gcagaaaaac tcgatgcaga agatcgttct
      241 ggcgtcgtgc tccattcgag cggcatcgcc aatctctctc gcccacgctt gggttcgtca
      301 aattccagag gagagtcaga catcgtcctt gctccaggca tgaccttcga ttttaaacct
      361 gccatccgca tgaagcggag cgcggcccaa gatgtacgga aggagaatcg ttccgtccag
      421 atcggcgagc acgtactggt cgctacggca agcgttagtc gtcttggaaa gcgcgagcta
      481 aaaccgttga ctacagaaag ctgagtctgt gttggcgttg cagtctatcg atccgataaa
      541 atcctcctcc ttcatcgatc gctgaccaaa aaccggtcac gcattttgtt ctttttgaca
      601 cgacaatgta atactatcgt cgtgaatttt ttggttggcg cgggcgccat aaagaaaggc
      661 gtgtgtaaga gatgatggat caagacgacg atgacccgac gaaccgttta gcctggcttc
      721 gcgccgctgt gcttggggcc gacgacggca tcgtctccac cgccgccctg atggttgggg
      781 tggcggcgtc aaatgcttcc ccgcaggcgg tgctgaccgc cggcctcgcc ggcctggttg
      841 cgggcgccgc atccatggct gccggtgaat acgtttcggt gagctcgcag cgagatctcg
      901 agcaggctct gcgcgagcgc gagaacagtc tggccaaggc atatcccaac gtagcattga
      961 ccgagttggc tatagcgctg caacttcaag gggtggatcc ggggctcgca cggaaagtgg
     1021 cctacgaaat ctcagcggct gaacccatcg gagccaatgt ccgcgtcaag tatggcatct
     1081 ctgaaaggac cgcggcacgc ccgcttcaag ccgctctcgc gtcggcggtc tcgtttgcgg
     1141 ttggcgctat cgttcccctt ctcggcatgc ttgcgcacac ccccgccgct cggatccaac
     1201 tcaccattac gttggcgctt ttcgccctcg cggtgtgcgg cgccctcgcg gccggcgccg
     1261 gcggcgcgtc gcggttgcgc ggttcactgc gagttgtgct gggcggcggg cttgccatgg
     1321 cgatctcagc acttatcggt cgcatcgtgg gaatcgtcgt gtgaagagcg ccgcgaaacg
     1381 agggctcgcc gcgttattag ggcaagtttt tattccatcg actttgcaag cgatggcgta
     1441 acgccttcct ttgcgctaat catcgatcat gcgcatctgt tcactgcttc ccagcaccac
     1501 cgaaatcgct tttgcgctcg gtctgggcga ccaagtggtc ggcgtgaccc acgaatgcga
     1561 ttaccccccg gaggcggaaa aaaaacccgt agtggtgcgc agcgccatcg attcgcatcg
     1621 gttgaacagc tctgagattg atcaccgggt aggggagctt ttgcaaaccg ggaaaagcct
     1681 gtacacaatc gatgacgagg ccttcaaagc agccgcaccc gacgtgatat tgacccaggc
     1741 gctgtgcgac gtttgcgccc ttgactacaa cgaagtagtg aaagcggctc agcgcttgcc
     1801 atgcaagccg acgatcgtgt cgttgattcc gcactgcctt acagacgtgt tggatgacat
     1861 cttgcgagtt ggcgaggcca cgcagcggca tagagaagcg gaaacgctcg ttctagatct
     1921 aagacgacgc atcgaagctg tgcgccagcg ctcagcccga tcctcgtcgc gtccacgaat
     1981 agcctgcata gaatggtttg atcccattta cgccgccggt cattgggtgc ccgaaatggt
     2041 tgagttggcc ggcgcgcatg atggtctagc ccgcaagggc gaaccgtcgg agaaattcca
     2101 gtggacagaa attctaaagt tccagcctga aattgttgtg ttaatgcctt gc
//
LOCUS       DATILV010000060        11363 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2570342, whole genome shotgun sequence.
ACCESSION   DATILV010000060 DATILV010000000
VERSION     DATILV010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 11363)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11363)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11363
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2570342"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1384)
                     /locus_tag="VLJ17_01405"
     CDS             complement(<1..1384)
                     /locus_tag="VLJ17_01405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21665.1"
                     /translation="MAIYSKKGKDPTEVALSAIQEALNIRESDLKPMRSAGPPETASA
                     AEAPDETRFRGARSTAREIPIETPATEPGHDQRDVVKAANDDRESIGLILQSLQRRPA
                     RTPFIIASLFTALWTIAALGLIYGLGGQLRQISGEAGWAPTVIGLSGAFSAPIVFFYA
                     LAHMVARLSELRIVSSSMAEATLRLAEPETLARDSIVTVGQAIRREVAAMGDGVERAL
                     ARAAELETLVNNEVAALERAYNDNEVRIRNLLDGLAQQRETLVGQAEQVRNAITNVHL
                     DLSHDITTVSELIAERVNESAQRITQSLADKGEQITVALGTAGDTMIEQLGERGSDLL
                     ERLERTSDETTQAIDMASDRLTSSLNFKSDHLNEQFLAIATNLQQSLASRLDDVVDGF
                     SQKSSSVLETVEIRTRELTETISDRSETVSRALIDTTGRLAETIALRADEVNNSLKTT
                     GESIVLDLSLR"
     gene            1767..2078
                     /locus_tag="VLJ17_01410"
     CDS             1767..2078
                     /locus_tag="VLJ17_01410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008192916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21666.1"
                     /translation="MGDQDKESLAALRPTEPQRRYLERGLSQPGGKLPLFDSEGREVA
                     SRTVQACLAHGWAEPWFNNPIKPDWQVCRLTAKGYAVLGQAPPDVVHEDAASKRHRMK
                     I"
     gene            2212..2637
                     /locus_tag="VLJ17_01415"
     CDS             2212..2637
                     /locus_tag="VLJ17_01415"
                     /inference="COORDINATES: protein motif:HMM:NF013767.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HSV21667.1"
                     /translation="MSDQPFFLKDLHQPFFLKESPSILGVEPPIDVEHLGRMTLGEQS
                     VEFEVLELFDRQAELLLGRMREVGPAGVATLAHTLTGSARGIGAWRVAEAAEALAHAA
                     TENRDLAPALETLDCAVIEARLAICAMLRISALAASGAS"
     gene            2779..3099
                     /locus_tag="VLJ17_01420"
     CDS             2779..3099
                     /locus_tag="VLJ17_01420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HSV21668.1"
                     /translation="MVKITFIDSTGKSRTIEAEPGSTVMETAIKHGVPGIEAECGGAC
                     ACATCHVYVDEAWREKTGPPSPMEEDMLDFGYDVRANSRLSCQIKVIDALDGLVVSTP
                     ERQA"
     gene            3244..4566
                     /gene="soxC"
                     /locus_tag="VLJ17_01425"
     CDS             3244..4566
                     /gene="soxC"
                     /locus_tag="VLJ17_01425"
                     /EC_number="1.8.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003612382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite dehydrogenase"
                     /protein_id="HSV21669.1"
                     /translation="MIQSRHRKGAHSVEHVAGNGLLHRRALLGRGVMLAGAMGAGTAG
                     SLTGAAAEALVDKPWSNEVGDVIAAYQTPSKFEKDVVRTVDNPKNEPRNSRARTPHHL
                     LKGIITPNGLHFTICHGGVPEIDPAQHKLVIHGMVERPLVFDLESLERYPMVSRIGFV
                     ECGGNSAPLFSNEPIQANVQALHGLASCAEWTGVLLSTLLDEAGVDPKAKWLIAEGAD
                     SPRLSRSVPLAKAMDDAMVAMYQNGERIQPGQGYPMRLWLPGYEGNMNVKYLRRVQVT
                     DQPALTMYEARTYAQILPDGKAYRFYFLQEVKSFISSPSHGLKLKEPGIYEITGVAYA
                     GTGRIAKVMVSADGGKSWADAALQEPRLPKAFTRFRMPWRWDGGPAILQSRAWDEAGN
                     MQPTREQFVAQRGQTTRPPSVLGFPSQHFNSITSWAVDAKGEVRHVYA"
     gene            4553..5083
                     /locus_tag="VLJ17_01430"
     CDS             4553..5083
                     /locus_tag="VLJ17_01430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003612381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSV21670.1"
                     /translation="MSMRKYAIAAGCVAVAVGAGAARAEGPNLGKPITPAELAPWDIN
                     VFPDGTNLPPGSGKAAEGAKVYAEKCATCHGDKGQGGVAGLLIGGPPRATLDGGKTIA
                     NFWPAATTLFDFIRRAMPYTAPRSLTDQEVYALTAYLLAANKLIGENDEINAKTLPQV
                     KMPNRDNFIVRFPDRI"
     gene            5448..6476
                     /locus_tag="VLJ17_01435"
     CDS             5448..6476
                     /locus_tag="VLJ17_01435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSV21671.1"
                     /translation="MSDPIKTDVLIIGAGPCGLFAVFELGLLDIKAHLVDILDKVGGQ
                     CAELYPEKPIYDIPALPVVSGQGLTNALMKQIEPFKPTFHLGEMVETIERIGDPQFRV
                     TTDQGKVFETKLIVVAAGGGSFQPKRPPVPGIEAYEGTSVFYAVRKMEQFRDKRLLIV
                     GGGDSALDWTLNLAPIARHLTLMHRRDQFRAAPDSVNKMRALVAGGKIDLKLGQITGL
                     EGEGGVLRAANAKPDKGEPYKIECDAMLPFFGLTMKLGPVANWGLNVAEDVIPVDTAA
                     FETNVQGIFAIGDISTYPGKLKLILCGFHEAALMAQKAYHYIFPDKRLVFQYTTSSTS
                     LQKKLGVM"
     gene            complement(6495..6971)
                     /locus_tag="VLJ17_01440"
     CDS             complement(6495..6971)
                     /locus_tag="VLJ17_01440"
                     /inference="COORDINATES: protein motif:HMM:NF024245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HSV21672.1"
                     /translation="MMMHRTAGFVGVLTLALTLLATQIPPAGAQGGKGLINPNTATES
                     DLQALPAMTPAIVKDMIERRPFKSVVELNKFLLDQKVTPEQAREFYRKAFVPINLNTG
                     TRDEFVLIPGVGSRMSAEFMEYRPWKNWTQFDKEIGKYVGQAETDRFKQYVVIPPN"
     gene            complement(6968..7447)
                     /locus_tag="VLJ17_01445"
     CDS             complement(6968..7447)
                     /locus_tag="VLJ17_01445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21673.1"
                     /translation="MDAQPPQAGADNMGSDRTELLRRWLLAILVLGLLGTVTELVLLE
                     HYEQPTQFVPLILIVAAIAVLAWEFRRHDLASRRAVQIVMALFVLAGFVGFVAHFYGS
                     AEYQLELNPDMSNWELLEKVLRAKAPPLLAPGMMLQLGLLGLAYVFSDSRFRRSEMK"
     gene            complement(7459..8229)
                     /locus_tag="VLJ17_01450"
     CDS             complement(7459..8229)
                     /locus_tag="VLJ17_01450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21674.1"
                     /translation="MVTHNVTAGLTGLFRRGGFGLFTALMMLGAASHTGAVEAAKPGE
                     RFDVTSVRAVRPTLVNTVAALQKGDIAGAKAAFEAYDSAWNGIEMFVNVRSKDMYDAL
                     EHVLQARIEKALNVPNPDVAALLADAQAILAKYDEAIDMVAKAPPLNPLWDDITRLRI
                     VRAHLREVVPALKAGNFDKARKSFAAFDTNWDSIEDMIKAHSADDYVAIEKGMIEIEK
                     ALMPEKPDAAAATALVNGVMAKYNVTVTEMIKEARSRP"
     gene            complement(8304..11243)
                     /locus_tag="VLJ17_01455"
     CDS             complement(8304..11243)
                     /locus_tag="VLJ17_01455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HSV21675.1"
                     /translation="MTATHGFELICEQKLSEINSTARYYRHIATGAELISLLNADENK
                     VFGISFGTPPTDSTGVAHILEHSVLCGSRKYPIKEPFVELMKSSLNTFLNAMTFPDKT
                     CYPVASQNVQDFYNLIDVYLDAVFHPRLTPQIFQQEGWHYELEAPDAPLVYKGVVFNE
                     MKGNYSSPDSMLSELSQQSLYPDITYGLDSGGDPKHIPDLTYEQLKDFHARHYHPSNA
                     KLFFYGDDDPDNRLRLLDKYLGEFNRIEVDANVPLQPRFDAPKRLTRTYAAGAAEEQP
                     QPGADTPKESMISVNWMIDEIVDIETALGFDILEQILIGNPAAPLYKALIDSGLGEGL
                     AGGGLNDGLRQPMFSIGLKGIDPADAEKIEQLITDTIGALADGGIDPLTVEAALNTVE
                     FHLRENNTGSFPRGIVFMLRALRTWLHGRDPLTALAFVAPLAAIKGHVARGESYFENL
                     LRRHFIDNPHRTVMVLKPDHEQAEREAQEEQGHLKAVRAGMTERDIGAVVEATRILKA
                     LQERPDPPEALATIPTLKLADLPRENKTIPIEVTSLRDTRVLYHDLFTNGVVYLDVGF
                     DLHTLPAELLAYVPLFGRALIETGVGNDDFVRLSQRIGRSTGGIHPMRWTSTQMGRAT
                     ATAWLNLRGKALPEQTGELLAILRDILAHARLDNRERFEQLVLEEKAALESRIVPAGS
                     GYVDRRMRANFHEADWADEQMGGVSYLFFLRKLADDVETGWDGVHAVLERIRATLVNR
                     AAIVCNVTAEYADWARLKPQLADFLGALPHAAVTAAPWRLADTPHSEGLVIPTKVNYV
                     GKGANLYREGVKPSGTHLVARAYLRTSWLWDKVRVQGGAYGGQCMFNRYSGDFTFVSY
                     RDPNLLATLDIYDRTAEFLKGTELGEAELTRNIIGTIGEVDTYRLPDAKGFASMQRYL
                     IGDTDAARQHMREEILSTTAADIRNFGDAMAQVAAKGRIIVLGSEQAIEAANAERPGL
                     LSVSRVM"
BASE COUNT         2166 a         3413 c         3521 g         2263 t
ORIGIN      
        1 cgcgcagact gagatcgaga acgatcgatt cgcccgtggt cttgagggag ttgttgacct
       61 cgtcggcgcg taacgcgatc gtttcggcga gccggccggt tgtatcgatc aatgcccgtg
      121 ataccgtctc ggagcggtcc gaaatcgttt cggtgagctc gcgcgtgcgg atttcgacgg
      181 tctccagtac cgaagagctc ttttgcgaga agccgtccac gacatcgtcc agacgagagg
      241 ccaacgactg ctgcaagttg gtggcgattg ccaggaattg ctcgttgaga tggtccgatt
      301 tgaaattgag actggaggtc agccgatcgc tggccatatc aatcgcttgg gtggtttcgt
      361 cgctggtgcg ttcgagccgc tccagcaggt cgctgccccg ttcgccgagt tgctcgatca
      421 tggtgtcgcc ggcggtgccg agcgcaaccg tgatctgctc gcccttgtcg gcgagcgact
      481 gggtgatgcg ctgcgccgat tcgttgacgc gctcagcgat cagttcactc accgtggtga
      541 tgtcgtgcga caggtcgaga tgcacatttg tgatggcatt gcggacctgc tcggcttgac
      601 cgaccagggt ctcgcgttgc tgcgcgaggc cgtcaagcag attgcggatg cgtacctcgt
      661 tgtcattata cgcgcgttcc agcgccgcga cttcgttgtt gacgagggtt tcgagctcgg
      721 cggcccgcgc cagtgcgcgt tctacgccgt cacccatagc ggcgacctca cggcgaatcg
      781 cctggccgac cgttacgatg gagtcacgag cgagggtttc aggctcggcg agacgcagcg
      841 tcgcttccgc cattgaactt gagacaatgc gcaattcgct caagcgcgcc accatgtggg
      901 cgagcgcgta aaagaacacg atcggagcac tgaatgcacc gctcaacccg atcacggtcg
      961 gcgcccaccc ggcttcccca gaaatttgac gcagctgccc tccaagacca taaatcaagc
     1021 ccagcgccgc gatggtccac agggccgtga acagacttgc aatgatgaac ggtgtgcgcg
     1081 ccggccggcg ctgcaacgac tgcaagatca ggccgatcga ttcgcgatca tcgttggcgg
     1141 ctttgacgac gtcgcgctgg tcgtggccag gctcggtcgc aggcgtctca atgggaatct
     1201 ctcttgcagt gctccgtgcg ccgcggaatc gggtttcatc cggagcttcc gcagcggacg
     1261 ccgtctcagg cggtccggcg ctgcgcattg gcttgagatc ggattcccga atgttgagcg
     1321 cctcctggat cgccgaaagc gcaacctcgg tcgggtcttt gcccttcttc gaatagatcg
     1381 ccatagttag gtagcctcac aaactacgcc cttcaggcgc aacaggctgt cgcctgcgct
     1441 ctgaatctgt gatgaatgtc gcgctgccgg ctgagatgga aatcagtccc cacaacccac
     1501 ctctctgtcg agcattttac tcgcggtgtg gcgaatcacg aagccaattc ttaacctctt
     1561 tttaatcatc gttaacacgt attatggtca aaattctaga agaagacaca gaatagacac
     1621 aattatagca ttgccgggcg ttcgatagcg gtacgaaagt cgctcggcgc cggcacatgc
     1681 ggggagctcc gccgagcgaa attctgctag gttagttgcc ccagggcgca tgacagatcg
     1741 gcgcttcctg tgaacaaaga aattccgtgg gcgatcaaga caaggagtca ctggctgccc
     1801 tgcggccaac cgagccgcag cgccgttatt tggagcgcgg cctgtctcag ccgggcggca
     1861 agctgccatt gttcgacagc gaaggccgcg aggtggcctc gcgtaccgtt caggcctgcc
     1921 tggctcatgg ttgggccgag ccatggttca acaatccgat caaaccggat tggcaggtgt
     1981 gccgcttgac cgcaaagggc tatgcggttc ttggccaagc gccgccagac gtcgtgcatg
     2041 aagacgccgc gtcaaaacga catcggatga aaatatagca aaagttaacc atggcggcac
     2101 agtcttgctg ccgaccatcg acgggaggcg tcattttacc gtttgtttcg atgtgttgct
     2161 tcaagctcac gttgcggaaa gaggcaacaa gtgcctcaat ggacaacggg tatgagcgat
     2221 cagccttttt tcctgaagga cttacatcaa ccctttttcc ttaaggaatc gccgtcgatc
     2281 ctcggggttg aaccgccgat cgatgttgaa cacctgggtc gcatgacgct cggcgagcag
     2341 agcgtcgaat tcgaggtgct ggaactgttc gaccgacaag cagaattgct gctcggcaga
     2401 atgcgggagg tgggaccggc aggggttgca acgcttgcgc atacgctcac cggatcggcg
     2461 cggggtatcg gggcttggcg ggtagcggag gcagctgagg ctttggcaca cgcggccacc
     2521 gagaatcgcg atttggcccc agcccttgag acgctcgact gcgcggtcat cgaggcccgg
     2581 ctcgctattt gcgcgatgct gcgcatttcg gctttagctg cgagcggagc aagctaaagc
     2641 cctccggata tccgcacagc ttttccggct tagcttgcgc cctggcgcac cgcgtaccga
     2701 gcggatatag gaatgcgccc ggccgatccg gctgcggcaa ttttcaggtt ggggcccgaa
     2761 tcgggctgtt cggcacgcat ggtcaaaatc actttcatcg acagcaccgg caagtcacgt
     2821 acgattgaag cggagcccgg atcgaccgtc atggaaacgg cgatcaagca cggcgtcccg
     2881 ggcatcgagg ccgaatgcgg cggggcctgc gcatgcgcga cctgccacgt ttacgtggac
     2941 gaagcttggc gcgagaagac cggtccgccc tccccgatgg aagaggatat gctcgatttc
     3001 ggttatgatg tacgggcgaa ttcgcgccta tcctgccaga tcaaggtgat cgacgcactc
     3061 gatggtcttg tcgtctcgac gccggagcga caggcctgac cattccgatc cccgtacgga
     3121 tccagggcca tcgcggtttc tactgcggcg ttctagacac cccgcggatt gtggcgcacc
     3181 atcgtcgatg tcgcatcggg atcggtgggt acccgacacg acggtctccg aggggagcaa
     3241 aacatgatcc aatccagaca tcgtaaaggt gctcattccg tcgaacacgt ggccggcaac
     3301 ggccttcttc accgccgcgc gctgctcggc cggggtgtca tgctcgccgg cgctatgggg
     3361 gcgggcacag ccggttccct gaccggcgcc gccgcagagg cgttggtgga caagccctgg
     3421 agcaacgagg tcggcgacgt cattgcggcc taccagaccc cctcaaagtt tgaaaaggac
     3481 gtggtgcgta cggtcgataa tccgaagaac gagccgcgca attcgcgcgc tcgaacgccg
     3541 catcatttgc tcaaaggcat catcacgccg aacggcctgc atttcaccat ttgccacggc
     3601 ggcgtgccgg aaattgatcc ggcgcagcac aaacttgtca tccacggcat ggtcgagcgg
     3661 ccgctggtgt tcgatctgga gtcgctggag cgctacccga tggtgtcgcg tatcggtttt
     3721 gtcgaatgcg gcggcaacag cgcgccgttg ttttccaacg agccgatcca agccaatgtg
     3781 caggcgctgc acggccttgc ctcatgcgcc gaatggaccg gggtcctgtt gtcgaccctg
     3841 ctcgacgagg cgggcgtcga ccccaaggcc aaatggctga ttgccgaggg cgcggattca
     3901 ccacggctct ctcgcagcgt gccgctcgcc aaggcgatgg atgacgccat ggtggccatg
     3961 tatcagaacg gtgagcgcat ccagcctggc cagggctatc cgatgcgact gtggttgccc
     4021 ggatacgaag gcaacatgaa cgtgaaatac cttcgccgtg tgcaggtcac cgaccagcca
     4081 gcactcacca tgtacgaggc gcgcacgtat gcgcaaatcc tgccggacgg aaaagcgtat
     4141 cgcttctact tcctgcagga ggtgaagtcg ttcatttcat cgccatcgca tggcctcaag
     4201 ctcaaggagc ccggcattta cgagattacc ggcgtcgcct atgcgggcac cgggcggatt
     4261 gccaaggtta tggtttcggc cgatggcggc aagagctggg cggatgcggc ccttcaggag
     4321 ccgcggctcc ccaaggcgtt cacccggttc cgtatgccgt ggcggtggga cggcggaccg
     4381 gcgattttgc agagccgcgc ctgggatgag gctggcaaca tgcagccgac ccgggaacag
     4441 ttcgtggcgc agcgcggcca gaccacgaga ccaccgtcgg tgctcggctt cccgagccag
     4501 catttcaatt ccatcaccag ttgggcggtc gacgccaagg gagaagtccg ccatgtctat
     4561 gcgtaagtac gcgatcgcgg caggctgtgt ggcagtcgcg gtcggcgccg gtgcggcacg
     4621 tgccgagggg ccgaaccttg gcaagccgat cacgccggcc gaacttgccc cctgggacat
     4681 caatgtgttc ccggacggca caaatctccc gcccggcagc ggcaaggcgg cggagggtgc
     4741 caaggtctac gcggagaaat gcgcgacctg ccatggtgac aagggccagg gcggcgtcgc
     4801 cggcctgttg atcggcggtc cgccgcgggc aaccctagac ggcggcaaga ccatcgcgaa
     4861 tttctggccc gccgccacca ccctgttcga cttcatacgc cgggcgatgc cctatacggc
     4921 gccgcgctcg ctcacggacc aggaggtcta tgccctgacg gcgtatcttc tcgccgccaa
     4981 caaactgatt ggcgagaacg acgagatcaa tgcgaagact ttacctcagg tgaaaatgcc
     5041 aaaccgggac aatttcatcg tgcggttccc ggaccggatt taacgggcgg gcgttgccaa
     5101 ggctggattg ctttgacctt gtggcgatct tgggaagggt aggcggggac gacgcagacg
     5161 accttttttg gtagcacata acgtttccga agcctcggcg acttttttta agatcatgcc
     5221 tttggcgcgt gcatggctgc cctgaccgaa acgccacaaa acctcggtgc tatgcggttc
     5281 tccgcatgca gcataactgg cccgcatccc gcggtttgac agtcgattca tgcttccgag
     5341 ccggtcacgc ttgcattttg tggccaaaag cgctctttgc cgagcggtga gccaaggcta
     5401 gacccttacc cctcagtctc atcatttcca ggccgcaaga accacgcatg tccgatccta
     5461 tcaagactga cgtactcatc attggcgccg gcccctgcgg tctttttgcc gtatttgaac
     5521 tcggcctgct cgacatcaag gcgcatctcg tcgacatcct cgacaaggtc ggcggccaat
     5581 gcgccgaact ctatcccgaa aagccgatct acgacattcc ggccttgcct gtggtgtcgg
     5641 gccaagggct gaccaacgcg ctgatgaagc agatcgagcc gttcaagccg acctttcatc
     5701 tcggtgagat ggtggagacg atcgagcgca tcggcgatcc tcaatttcgt gtcaccaccg
     5761 atcagggcaa ggtgttcgag acgaagctca tcgtggtggc agcgggcggt ggctcgtttc
     5821 agcctaagcg ccccccggtg cccggtatcg aggcctatga aggcacgtcg gtgttttacg
     5881 cggtacgcaa gatggagcag ttccgcgaca agcgcctgct catcgtcggc ggtggcgact
     5941 cggcgctcga ctggaccctc aatcttgcac cgattgcccg ccacctcacc ctcatgcatc
     6001 ggcgcgacca attccgcgcc gcgcccgata gcgtcaacaa gatgcgggcg ctggtggcag
     6061 gcggcaagat tgatctcaag ctcggccaaa tcacgggtct ggaaggcgag ggcggtgtgc
     6121 tgcgcgccgc caacgccaag cccgacaagg gcgagcccta caagatcgag tgcgatgcca
     6181 tgctgccgtt cttcggcctc accatgaagc tcggcccggt tgcgaattgg ggcctcaatg
     6241 tcgccgaaga cgtgatcccg gtggacaccg ccgcgttcga gaccaacgtg cagggcatct
     6301 tcgcgatcgg cgacatcagt acgtatccgg gcaagctcaa gctcatcctg tgcggcttcc
     6361 atgaggccgc cctgatggcc caaaaggcgt accactacat cttcccggac aagcgcctcg
     6421 tgttccagta cacgacgtcg tcgaccagcc tacagaagaa gcttggggtg atgtagcggc
     6481 tgcctgtgtc aacatcagtt cggcggaatg actacgtatt gcttgaatcg gtcggtttcc
     6541 gcctgcccca catatttgcc gatttcctta tcgaactgcg tccaattctt ccacggccga
     6601 tattccatga attcagccga catgcgcgag ccgacgccgg ggatcagcac gaattcatcg
     6661 cgcgtaccgg tgttaaggtt gatgggcacg aaggcctttc ggtagaactc ccgcgcctgc
     6721 tccggcgtca ctttctggtc gagcaggaac ttgttcagtt caaccacgct cttgaagggg
     6781 cgtctctcga tcatatcctt cacgatggcg ggcgtcatgg cgggcagggc ttgtaagtca
     6841 ctttcggtgg ctgtgtttgg gttgattagt cccttgccgc cctgggcgcc ggcgggcgga
     6901 atttgcgtcg ccagcagcgt cagagcaagt gtgagcactc caacaaaccc ggcggtccgg
     6961 tgcatcatca tttcatctca ctccggcgaa agcgggaatc cgaaaataca taggcgagac
     7021 cgagcaggcc cagctgcagc atcatgccgg gagcgagtaa ggggggcgcc ttggcgcgca
     7081 ggactttctc caagagttcc caattgctca tgtccggatt gagctcgagc tggtactcgg
     7141 ccgagccgta aaagtgcgcg acgaaaccga cgaagcccgc cagtacgaaa agcgccatca
     7201 cgatctgcac cgcgcgacgg ctcgccagat catgtcgtct gaactcccag gctagcaccg
     7261 cgatcgcggc aacaatcaag atcaggggca cgaactgcgt cggctgctcg taatgttcca
     7321 gcagcacgag ctcggtcacg gtgcccagga ggccgagcac gaggatagcg agaagccagc
     7381 ggcgcagcag ttcggtgcga tcgctcccca tgttatcggc gcccgcttgc ggtggttgcg
     7441 cgtccaccgg acgctcacct agggccggct ccgcgcctct ttgatcatct cagtcaccgt
     7501 gacgttgtat ttcgccatca caccgttgac caaggcggtc gctgcggcag catccggctt
     7561 ctcaggcatc agcgctttct cgatctcgat catacccttc tcgatcgcca cgtagtcgtc
     7621 ggcagagtgc gccttgatca tatcctcgat gctgtcccag ttggtatcga acgccgcgaa
     7681 ggatttccgc gccttgtcga aattgccagc cttgagggcg gggaccactt cgcgcaggtg
     7741 cgcccggacg atgcgcaggc gggtgatgtc gtcccagagt ggattgagcg gtggcgcctt
     7801 cgccaccata tcgatggctt cgtcatactt ggcaagaatg gcctgggcgt ccgcgagcag
     7861 cgctgcaacg tccggattgg ggacgttgag cgccttctcg atcctggcct ggagcacatg
     7921 ctccaaggca tcgtacatgt ccttgctgcg tacattgacg aacatctcga tgccgttcca
     7981 cgcggaatca taggcttcaa aggccgcctt ggcgcccgca atgtcacctt tttgcagcgc
     8041 cgcgacggtg ttcaccaagg tcggccgcac cgccctaacg ctggtgacat cgaagcgctc
     8101 gccgggcttt gcggcttcca cggcgccggt gtgactggct gcgccaagca tcatgagggc
     8161 ggtgaataga ccgaagccgc cacggcgaaa cagtccggtc aaccccgccg ttacgttatg
     8221 cgtgaccatt gtgtcctccc tcgtcgcgag cgttgtttcg aataagtcta aagaaatctc
     8281 tagacttagt cgaatacgaa atgtcacatc acccgggata cactcaataa ccccggccgt
     8341 tccgcattcg ctgcctcaat cgcctgctcg gagccgagca caatgatccg gcccttggcg
     8401 gcgacctgcg ccatggcgtc gccgaaattg cggatgtcgg ccgccgtggt ggacaggatt
     8461 tcttcgcgca tgtgctgacg cgctgcatcg gtgtcgccga tcaggtagcg ctgcattgag
     8521 gcgaagccct tggcgtcggg gagccggtag gtatcgacct ctccgatggt gccgatgatg
     8581 ttgcgagtca attccgcctc gccgagctcg gtgcctttga gaaactccgc cgtgcggtcg
     8641 tagatgtcga gggtggcgag caggttgggg tcgcggtaag agacgaaagt gaagtcgcct
     8701 gaatatcgat tgaacatgca ctggccgcca taggcgccgc cttgcacacg gactttgtcc
     8761 cacagccagc tggtgcgtag ataggcgcgt gccaccagat gggtaccgct cggcttcacg
     8821 ccctcacgat agaggttcgc acccttgccg acataattga ccttggtggg aatcaccagg
     8881 ccttcggagt gtggcgtgtc ggcaagccgc cacggcgcgg ccgtgacggc agcgtgagga
     8941 agcgcgccga ggaaatctgc aagctgaggc ttaagccgtg cccaatcggc gtactcggcc
     9001 gtgacgttgc acacgatggc ggcgcggttg accagcgtcg cgcggatgcg ctccagcacc
     9061 gcgtgcacgc cgtcccaacc ggtttccaca tcgtcggcga gcttgcgcag gaagaacagg
     9121 taactcaccc cgcccatctg ctcgtcggcc caatcggcct cgtggaaatt ggcgcgcata
     9181 cgccggtcca catagcccga tccggccggt acgatccggg attccagtgc tgccttctcc
     9241 tccaacacca gttgttcaaa tcgctcccga ttgtcgagcc gggcgtgggc caggatatcc
     9301 cgcaggatcg ccaacaattc gccggtctgt tccggcagcg ccttgccgcg caggttgagc
     9361 cacgctgtag cggtcgccct gcccatctgg gtcgaggtcc agcgcatcgg gtggatgccg
     9421 ccggtcgaac ggccgatccg ttgcgacagc cgtacaaaat cgtcgttgcc gacgccggtc
     9481 tcgatcaggg cgcggccaaa cagcggcacg tacgcgagaa gctcggccgg cagcgtgtga
     9541 aggtcgaagc cgacgtcgag atagacgacg ccgttggtaa agaggtcatg gtagagcacg
     9601 cgcgtgtcgc gcaggctcgt cacctcgatc gggatggtct tgttctcgcg cggcaagtcg
     9661 gcaagcttga gcgttgggat ggtggcgagc gcctcgggcg gatcgggccg ctcttgcagc
     9721 gccttgagga tgcgcgttgc ctccaccacg gcgccgatgt cgcgctccgt catgccggcg
     9781 cgcaccgcct tgagatgccc ctgttcctcc tgcgcctcgc gctcggcctg ttcgtggtcg
     9841 ggcttgagca ccatgacggt acggtgaggg ttgtcgatga aatgacggcg cagcagattt
     9901 tcgaaatagc tctcgccgcg tgcgacgtgc cccttgatgg cggcgagtgg tgccacgaag
     9961 gcgagcgcgg tgagcggatc gcgcccgtgc agccaggtgc ggagcgcccg cagcatgaac
    10021 acaatcccgc gtggaaatga cccggtattg ttctcgcgca ggtgaaattc cactgtgttg
    10081 agcgccgcct cgacggtcag cggatcgatg ccgccgtccg caagagcgcc gatcgtatcg
    10141 gtaatcagct gctcgatctt ttcggcgtcg gccggatcga tacccttcag cccgatcgag
    10201 aacataggct gccgcagccc gtcattgagg ccgccgccgg ccaagccttc gccgaggccg
    10261 gaatcgatca gcgccttgta gagcggcgcc gccggatttc cgatcaggat ctgctccagg
    10321 atgtcgaagc cgagcgcagt ttcgatgtcg acgatttcgt cgatcatcca gttcaccgag
    10381 atcattgact ctttcggggt gtcggctccg ggctgcggct gttcctcggc ggccccggcc
    10441 gcataggtac gggtcaaccg cttcggggca tcaaagcgcg gttgaagcgg cacgttcgca
    10501 tcaacttcga tccggttgaa ttcgccgaga tatttgtcga gcagacgcag ccggttgtcg
    10561 ggatcgtcgt cgccgtaaaa gaacagcttc gcgttggatg gatgataatg ccgcgcgtga
    10621 aagtccttga gctgctcgta ggtgaggtcc ggaatgtgct tcgggtcgcc gccggaatcg
    10681 agcccataag taatgtcggg ataaagcgac tgttgcgaca gctcgctgag catgctgtcc
    10741 ggggatgaat aatttccctt catctcgttg aacaccacgc ccttgtagac gagcggcgca
    10801 tccggcgcct caagctcgta atgccaacct tcctgctgaa agatctgcgg cgtcagtcgt
    10861 gggtggaaca ccgcatccag atagacatca atgagattgt agaaatcctg gacgttctgg
    10921 ctcgccaccg gatagcaagt cttatccgga aacgtcatgg cattgaggaa agtgttgagc
    10981 gagcttttca tcagctcgac gaacggctcc ttgatgggat atttgcgcga tccgcatagc
    11041 accgagtgct ccaggatgtg ggcaacaccg gtagaatccg tcggcggagt gccgaagctg
    11101 ataccaaaca ccttattttc gtcggcgttg agcagcgaga tcagttcggc gcccgtcgcg
    11161 atatggcggt agtagcgcgc cgtggagttg atttccgaca atttctgttc gcagatgagc
    11221 tcaaagccgt gggtcgcggt catcaatgcc tcgcaagttg aaggtggggg gagcggatgt
    11281 aattctgctg gatgataatc actcgggggg gatttgaaag ccccgaaaat atcggggcgc
    11341 atagggcggg ttagcccgag gtg
//
LOCUS       DATILV010000061         4873 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_781786, whole genome shotgun sequence.
ACCESSION   DATILV010000061 DATILV010000000
VERSION     DATILV010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4873)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4873)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4873
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_781786"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            205..2016
                     /locus_tag="VLJ17_01460"
     CDS             205..2016
                     /locus_tag="VLJ17_01460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase family protein"
                     /protein_id="HSV21676.1"
                     /translation="MSKINPNPFTTRPEIDGTFGVVTSTHWIATAVGMSMLEKGGNAF
                     DAACATAFTLQVVEPHLNGPGGDVPVILFDVRKGHPEVICGQGPAPAAATIAHYRSLG
                     LDMVPGTGLLAACVPGMFDTWMTLLRDYGTMRLADVLAPAIFYATEGHPLVERAAATI
                     ATVEQLFREHWPTSAAVYLRDGKVPPTGTLFTNQALAETYKRVLREASGPGSPEQEIE
                     RARKIWSQGFVAEAIDRFCRSQEIMDTSGQRNRGVLTGQDMAHWQATVELPLTYQYGR
                     YTVCKPGPWAQGPVMLQQLALLKGFQLDGLDVTGPEFIHTLVEASKLAFADREKFYGD
                     PEFEEIPIETLLSEAYNEERRRLIHHTASLELRPGSVEGFGAVVKLKQPPPLQAREGD
                     AFAAMGAGEPTVGRLGEVRGDTVHFDIVDRAGNMISATPSGGWLQSSPVIPELGFGLG
                     TRGQMFWLEDDHPASLKPGKRPRTTLSPTLALRDGEPYLAWGSPGGDQQDQWTTQFFL
                     RHVHAGLNLQEAIDAAAWHSEHFPISFWPRTARPGVLVMESRVPAESRKELEKRGHVV
                     EVGPAWSEGRLTAASRDGRRRKAAANPRGMQGYATGR"
     gene            2085..3059
                     /locus_tag="VLJ17_01465"
     CDS             2085..3059
                     /locus_tag="VLJ17_01465"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV21677.1"
                     /translation="MTGIFAAIFAMVMLCTALGTNAVAADYPTRPVNLIVAFTPGGPS
                     DVLARIVGRQLEKILGQPFVIDNRPGGAGNIAAETVAHAAPDGYTLLMGNNGLLATNQ
                     SLFRKLNFDAEKDFAPISLIGSQPNILVVNPKLGINSMAELIAYAKANPGKLNYANSG
                     FGAAAHLSAELFKSEAKVDIVSVSYKGAAPALQDLIAGHVQVMFATSASVVGFLKAGT
                     LRPLAVTTLKRFSLMPELPTIAELSLPGFDATTWHGLVAPSGTPRDVIATLNRATVQA
                     LKDADTLRQLHDLGVEVSSSTTEEFAAYIKSEIPKWAAVVKASGAQVE"
     gene            3638..4849
                     /locus_tag="VLJ17_01470"
     CDS             3638..4849
                     /locus_tag="VLJ17_01470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21678.1"
                     /translation="MSTATTAAAHVKWFVNCNASDEPLPVRDVFTARFFFCATLFLAV
                     FYTACEAEESAVGVAVSRLLDRWTAPLHRRTEDLLRAATAISFALLWADGSLILTPEL
                     KGSNFWLLAIQLLIPAYLFTRATLPAAGAGIFVLYGYGVATYGLFHMLDYWVFLGLGG
                     YFALSVSNNPRILGFRFDLLRWTVALSLLWPAMEKFVYPAWVAPIAITHPEVTFGFDV
                     ALVVTAAGVVEFGLSFALFWTPLVRRLAALAFAVLLTAATFDFGKVDGIGHMMVIIIL
                     LLVFADPGRKQACCSPPLAPVASCAAWAATIFLYTGAHTLYYRSWSEALAPLVGAAIS
                     LAFIFVRLRWASDVSLPTTARRPRPTVGDPRDGRGHRGPARALSPRDKYDDHRMPFPS
                     SRNDGRYHLVR"
BASE COUNT          912 a         1506 c         1472 g          983 t
ORIGIN      
        1 tcgatcgcag cggcaagccc gacaggaccg cccccgacga tcaatgcgaa agtttcagat
       61 tgcattaaac tcccgacatt tccttaaggg tctctggcac ccggttgagt accgatgcgg
      121 tcgttcgcag tggcggcgtc ccgaccgcaa cgatatgata tactgacgcc acgcgaggca
      181 gcccagaccc ctgaatcgga atccatgagc aagatcaatc ccaacccctt caccacgcgg
      241 cccgaaatcg acggcacgtt tggggtcgtg acctcgaccc attggattgc gactgcggtt
      301 ggcatgtcga tgttggaaaa aggcggcaac gccttcgacg ccgcatgcgc taccgcgttc
      361 acgcttcagg tggtggaacc acatctcaac ggaccgggcg gcgacgtgcc ggtgatcctg
      421 ttcgatgtgc gcaagggcca tccggaagtg atttgcggcc aaggtcccgc gccggcggcg
      481 gccaccattg ctcattaccg aagcctcgga ctcgacatgg tgcccggcac cggcttgctc
      541 gccgcctgcg taccaggaat gttcgacacc tggatgacgc tgctgcgcga ctacggcacc
      601 atgcggcttg ccgacgtgct cgcgcccgcg atcttctatg cgactgaggg gcatccgctg
      661 gtggaacgcg ctgctgccac catcgcgacc gtcgaacagc tgttccgtga gcattggccg
      721 acttcggctg ccgtctactt gcgcgacggc aaggtgccac cgaccggcac gctgtttacc
      781 aaccaggccc ttgccgaaac gtataaacgg gtgctgcgcg aggcgtcagg gcccggcagc
      841 cccgagcagg agatcgaacg cgctcgcaaa atatggtcgc aaggatttgt tgccgaggcg
      901 atcgatcgct tctgccgcag ccaagagatc atggacacca gcgggcagcg caatcgcggg
      961 gtgctgaccg gacaggatat ggcgcactgg caagccaccg tcgagctgcc actgacgtat
     1021 caatatggcc gctacacggt ctgcaaacct ggaccatggg cgcaggggcc cgtgatgctg
     1081 caacaactcg cattgctcaa gggatttcag ctcgacgggc tcgatgtcac gggtccggaa
     1141 ttcatccaca ccctcgtgga ggcatcgaag ctcgcgtttg cagaccgaga gaaattctac
     1201 ggcgatccag aattcgagga gataccgatc gagaccctgc tctccgaagc ctacaacgag
     1261 gagcgacgaa ggctcatcca tcacacggca tcgctagaac tgcggccggg ctcggtcgaa
     1321 ggcttcgggg ccgtcgtcaa gctcaagcag ccccctcccc tgcaagcaag agagggagac
     1381 gctttcgccg ccatgggggc gggcgagccg accgtcggcc gactcggcga agtgcgcggc
     1441 gatactgtgc atttcgatat cgtggatcgg gccggcaaca tgatttcagc gacaccctcg
     1501 ggcggctggc tgcaatcctc gccggtgatt ccggaactcg ggttcggtct cggcaccagg
     1561 ggccagatgt tctggctgga ggacgaccac ccggcctcgc tcaagcccgg caagcggccc
     1621 cgcaccacgc tttcgccgac gttggcgctg cgcgatggcg aaccctacct cgcctggggc
     1681 tcacctggtg gcgaccagca agatcaatgg acgacgcagt tcttcctgcg ccatgtgcac
     1741 gccggactca atctccagga ggcgatcgat gcggcggctt ggcattccga gcatttcccg
     1801 atctcgttct ggccccgtac ggcgcgaccc ggtgtgctgg tgatggaaag ccgtgtgcca
     1861 gcggagtcac gcaaggagtt ggaaaagcgc ggtcacgtgg tggaggtcgg gccggcctgg
     1921 tcggagggcc ggctcaccgc agcatcccgc gacggccgcc gccgcaaagc cgccgccaat
     1981 ccgcgcggca tgcagggcta cgcgacggga cggtaaagta ggctcgtagg atgagttgag
     2041 cgcggcgaaa cccatccgtg ctacgtaatt ggagtggtga gcccatgact ggaatttttg
     2101 ccgcaatatt cgctatggtc atgctttgca ccgctctcgg caccaacgcc gttgccgccg
     2161 actacccaac ccgccccgtc aacctcatcg ttgccttcac gccgggaggg ccgagcgatg
     2221 tgcttgcacg catcgtgggc cggcagctgg aaaagattct tgggcagccc ttcgtgatcg
     2281 acaaccggcc cggcggcgcc ggcaacattg cggccgagac ggtcgcgcat gcggcgcccg
     2341 acggctacac actgttgatg ggcaacaacg gactcctcgc caccaatcag agcctattcc
     2401 ggaagctcaa tttcgatgcc gaaaaggatt tcgcacccat cagcctgatc gggtcgcagc
     2461 caaacatcct cgtcgtcaat ccaaagctcg gcatcaacag catggccgag ttgatcgctt
     2521 acgcaaaggc caatcccggc aaactgaact acgccaattc gggcttcggc gcggctgcgc
     2581 acctgtcggc ggaattgttc aagtccgaag ccaaggtcga tatcgtgtcg gtgtcctaca
     2641 agggtgcagc gcctgccttg caggatctga tcgccggaca tgtgcaggtg atgtttgcga
     2701 cttccgcctc ggtggtgggc ttcctcaagg ccggcaccct gcggccgctc gccgtgacga
     2761 cactcaagcg cttctccctg atgccggagt tgccgacgat cgcggaactc agcctgccgg
     2821 ggttcgacgc caccacttgg cacgggctgg tggcgcccag cggcacgccg cgcgatgtca
     2881 tcgccacgct caatcgcgcc accgtgcaag ccctaaagga tgcagacacg ctgcgccagc
     2941 tccacgacct cggggtcgag gtcagctcca gcacgacgga agaattcgcc gcttacatta
     3001 agagcgaaat tcccaaatgg gccgccgtgg tgaaggcctc gggtgcgcaa gtggagtgag
     3061 gggccggacc gctgttgcga acctgacctt caaaagcgat ttgacgtctc gacaccgcgc
     3121 gcccgcctcc cttcggacgc aacatcaaca tggcgcgacg ctggcagatg gcgctgtgct
     3181 cttttgcatc acatttttcc cttgttgttc gccgcactgc aacaaaacat ccacatcgcg
     3241 gcccatggtt cgccattaga aacgcacaca ttcgttgcta tgcacaacgc acaactttcg
     3301 ttgctataca cgtgttgcta tgcacgtaac gcacacattc gttgcaatgc acaacgacac
     3361 attcgttgct atgcacaaag tattggggtg ggtccctgac gatacaattt cgtgttgtct
     3421 cctaccctgg ttcacccagg gaacgcagcc gtttgattga cggcagagaa agcgtcttct
     3481 gactcaaaat gaggagaatc gctgggcacc tattgtaggg cccaagcgcg agcatggttt
     3541 tcgcacggag cagagcttgc cgatgccaga tgccaaacat aatcgtcata gaataacgaa
     3601 gctgatggtc tttgcaggtt gcctggcgat cagttggatg tccacggcca ccaccgcagc
     3661 cgctcacgta aagtggtttg tgaactgcaa tgcttccgac gagccgctac cggtgcggga
     3721 tgtgttcacg gcgaggttct tcttctgcgc gacgctattc ctcgcggtgt tctataccgc
     3781 gtgcgaagcc gaggagagtg cggtcggtgt cgcagtctca cgactgctag atcgctggac
     3841 cgcgccgctg catcggcgta ccgaagacct tctgcgcgcc gcgacagcga tatcctttgc
     3901 cctgttgtgg gcggacggta gcctcattct cacgccggaa ctcaagggca gcaatttctg
     3961 gctgttagcg attcagctgc tgattccggc ctatctgttt acgcgggcga cgctcccggc
     4021 cgcgggggcg ggcatctttg tgctctacgg ttacggtgtc gccacctatg gtctcttcca
     4081 catgttggat tattgggtct ttctcgggct cggtggttac tttgcgcttt cggtgtcgaa
     4141 taatcccagg atactcggct ttcgtttcga tttgctgcga tggaccgtcg ccctctcgct
     4201 gttgtggccg gccatggaaa aattcgtgta tccagcttgg gtcgcgccga ttgcgataac
     4261 gcatccggag gtgactttcg gctttgacgt tgccctcgtt gtgactgcgg ccggggtcgt
     4321 ggaattcggc ttgtcgttcg cgttgttttg gacgccgctg gtgcgccgtc ttgctgccct
     4381 cgcattcgct gtgctgctca cggccgcgac attcgatttc ggcaaggtgg acgggatcgg
     4441 ccatatgatg gtcatcatca ttctgctgct cgtatttgct gatccgggaa gaaagcaggc
     4501 ctgctgtagc ccgccgcttg ctccggtcgc gagctgcgcg gcttgggcag ccaccatttt
     4561 tctctacacg ggcgcgcaca cgctttatta caggtcatgg agcgaggcgc tcgctcctct
     4621 tgtgggtgct gcgatatccc ttgcattcat ctttgtgagg ctgcggtggg cctcagacgt
     4681 ttccttaccg accacggcgc gccggccgcg accgaccgtg ggcgatccaa gggatggacg
     4741 aggtcaccgc gggccggcga gagccctctc gccgagagac aaatacgacg atcataggat
     4801 gccgtttccg tcgtcgcgca acgatggccg gtatcatctg gtgcgatgat ttgcgtatcc
     4861 tgtgagctca tgt
//
LOCUS       DATILV010000062         1559 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1292993, whole genome shotgun sequence.
ACCESSION   DATILV010000062 DATILV010000000
VERSION     DATILV010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1559
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1292993"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            190..897
                     /locus_tag="VLJ17_01475"
     CDS             190..897
                     /locus_tag="VLJ17_01475"
                     /inference="COORDINATES: protein motif:HMM:NF018473.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1223 domain-containing protein"
                     /protein_id="HSV21679.1"
                     /translation="MKRSLRECLAAAAMLCCVAATNAQPRPVVVELFTSQGCSSCPPA
                     DAYVGKLSARSDVLDLSFHVDYWDDLGWRDRFALTQSVERQKIYARNLRSSSVYTPQL
                     VVDGRDDYLGSDQKAIARALSENREGVPVGVSVRDAEILVEIGAQPNGPASDVMLVAY
                     LRHAVSAVGRGENAGRTLEEFNIVRDIRALGPWKGQVQTFHVARSSLPPDATDVAVLV
                     QPSGQGPIIGAAARALR"
     gene            complement(1085..1351)
                     /locus_tag="VLJ17_01480"
     CDS             complement(1085..1351)
                     /locus_tag="VLJ17_01480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21680.1"
                     /translation="MVLTSDGGSAQRKEWNFMSWAKDLTPCPLLVIGASKASGEENQR
                     FAEAVALSGGKVIAVTLSSDHSFQDHRIALAAEVVDWLQKLPNP"
     gene            1350..>1559
                     /locus_tag="VLJ17_01485"
     CDS             1350..>1559
                     /locus_tag="VLJ17_01485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21681.1"
                     /translation="MDSPPTSVDVATAGRWQQMQWPQDLGAGLIDSGGRCSHPFAFSS
                     QFPDRRRCAVQAPIDVRFDWELAQWG"
BASE COUNT          283 a          472 c          491 g          313 t
ORIGIN      
        1 cgatgttttg gcagcgaaac tgccatccgg ttgatcagga gccgatgagg gtctgcgtgg
       61 gcgccggctt tctgagatgc ccgcacttag ccggcaatcc tatggcggcc gatcagcact
      121 gacaggaacg ccatattcgg atggcgtgcc cggtctacgt gtcacggcaa tgctccgcga
      181 gggcttccca tgaaacgctc acttcgagaa tgcctggctg ctgcggcaat gctgtgctgc
      241 gtggcagcga cgaacgctca acctcgccct gtggtggtcg agctctttac ctcccaaggc
      301 tgcagctcat gtccccccgc ggatgcctac gtcggaaaat tgagtgcacg gtctgacgtc
      361 cttgacttgt cgtttcacgt ggactactgg gatgacctcg gctggcgtga tcggtttgcc
      421 ttgacccagt cggttgagcg gcagaagatt tacgctcgaa acctgcgcag ttcgtccgtg
      481 tatacgccgc agcttgtggt tgacggacgc gatgattatc tcggttccga tcagaaggcg
      541 attgccagag cgctgagcga gaatcgggaa ggcgtgccgg tcggagtctc ggtgcgcgac
      601 gcagagatac tggtagaaat cggtgcgcag ccgaacggcc ccgccagcga cgtcatgctc
      661 gttgcctacc tgcgccatgc ggtttcggcg gtcgggcgcg gggaaaacgc gggccgcacc
      721 ctggaggagt tcaacatcgt gcgtgacatc cgcgccctgg gtccgtggaa ggggcaagtg
      781 cagaccttcc acgtggcgcg gtcttcgctg ccgcccgatg cgaccgatgt ggcggtcctc
      841 gttcagccgt ccgggcaagg cccgatcatc ggagccgccg cccgcgcatt gcgctgagtg
      901 ggctcgtctg cggattcagt gccaagcaaa ggaaaacaaa attcgtgttc cgcagtagcc
      961 ctcgggcgca actgcaaacg caaaggaata gcgggaacgt catggccgcg ttaggccggt
     1021 gttgacccgt ttctgtcggt cacgaccgct gtcggggggg cggctcctgc tcagaacccc
     1081 caattcacgg gtttggaagc ttctgtaacc aatcaaccac ctccgccgca agagcaatgc
     1141 ggtgatcctg aaagctgtgg tcactcgaca aagtgacagc aatgaccttg ccaccggaga
     1201 gcgcgaccgc ttcagcaaac cgctggtttt cttctccgct tgccttcgat gccccgatca
     1261 ctagcagcgg acacggcgtc aggtccttgg cccatgacat gaagttccac tccttgcgct
     1321 gcgcgctacc gccgtcggac gttagtacca tggactcgcc gccgacctcg gtcgatgtcg
     1381 cgaccgccgg acgatggcag cagatgcagt ggcctcagga tctaggcgcc ggactgatcg
     1441 acagcggcgg acggtgctcc cacccatttg cgttctcgtc gcaatttccc gacagaagac
     1501 gttgcgctgt tcaggcgccg attgacgtac gcttcgattg ggagctggct caatggggg
//
LOCUS       DATILV010000063         5143 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3848367, whole genome shotgun sequence.
ACCESSION   DATILV010000063 DATILV010000000
VERSION     DATILV010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5143
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3848367"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1194)
                     /locus_tag="VLJ17_01490"
     CDS             complement(<1..1194)
                     /locus_tag="VLJ17_01490"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV21682.1"
                     /translation="MLGVTSLATALWAQEGGPGKPWRGAGAPPCYGSEGGTIKCVPAP
                     GVVAIRAGQLFDSKSGQMVSRQIILLQGERITEVGAEAQIKIPAGAQVIDLSQATVVP
                     GMIDAHTHMFNNPKPGMSRETSTLIAIQNLQADLYAGFTAARDMSSHGNGYGDVDIRN
                     AINEGRIDGPRFKVSGRGIVWGANPATAPVNPLTSIVVRSADEARAAVREHVEHDADW
                     IKLFPGGAYSFAPNGEPQYVTTYPLPVLQALIEESHRLGRKTGCHVFGGEGLTNAIVA
                     GCDTVEHAYGLIQEQADTMVAKGLFYDPTLVRYTEPYMDDNDNRNTGGKYRMIPIFEK
                     AVTMAGSTKGLRIMVGSGVDGSTFPHGTQALEIESFVKQAHMSPARAIQSATIINAEA
                     LGWQDQ"
     gene            complement(1630..3558)
                     /locus_tag="VLJ17_01495"
     CDS             complement(1630..3558)
                     /locus_tag="VLJ17_01495"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HSV21683.1"
                     /translation="MDYDSLTGLRRRLFIGTSAFVLASAALAASTHAAEPDKAVNAIK
                     TASPIKHVIIIVGENRSFDHLFATYAPKNAEAKVLNLLSQRIVNADGTPGPNFAKAHQ
                     FQITSAPNFGKFFVSADLKNKALYTTLPPPDIAGVPAVSPLAFILGIPGGDPGLPPQD
                     QFLFGTGGTGLAATLGPDTRIANVNTLPPGPFQLTGPTMPYDAFTGDTIHQFFQMYQQ
                     MDCAIDKEHVTRRNPTGCLHDLQSAITTTFATPPGGTPHDTGQTMAFFNMQKGDAPIT
                     KRLADQYTISDNYHQPVMGGTGPDSIPLGFADQIFFGDSTGKAATPIATRIYNPDPQP
                     ASLNFYTQRAQWFNCSDESAAGIKAIADYLKALPYEISPMCDPGHYYPAVNITPAFTP
                     GGLPNGVPNNTNPTNNIIPPVFIRSIGDELNDHNIPWKYYGGGYNLAVAGNPINGYCD
                     ICNPFEHQANYPSLRADHMRDVTDLFTDLKNGTLPAVSYVKPDGAMDGHPASSKWGLF
                     EAFADNIIKLAQSNKEQWKETAIFVTVDEGGGYYDSGFIQPVDFFGTGPRIPMIAVSP
                     FSTGGRVTHSYTEHSSFVKFVERNWHLGKLTTRSRDNLPDPKADDDSPYVPTNMPAIG
                     DLFDMFDFGDRDDDRDHK"
     gene            complement(3692..5044)
                     /locus_tag="VLJ17_01500"
     CDS             complement(3692..5044)
                     /locus_tag="VLJ17_01500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020091013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HSV21684.1"
                     /translation="MNLFAKLAARAESGNPVRIGVIGAGKFGSMFLSQAPRSPGLHIV
                     GIADLNVARARQSCARIGWSAERYAAGSLREAMRDGTACIVDDAEAVIAADGIDIIVE
                     ATGNPAAGIRHALMCCKHRRHIVMVNVEADVLAGPLLARRAAAAGILYSFAYGDQPAL
                     IVELIDWARTAGFEVICAGKGTKYLPIYHQSTPETVWGHYGFTEKQVAGGDFNAQMFN
                     SFLDGTKSALEMAAVANAAGLEPAAGGLVFPPCGVDDLPSVLRPQHDGGVLAQRGTVE
                     VVSSLERDGRPVFRDLRWGVYVTFEAPSDYVRKCFAEYGLKTDSTGRYAAMYKPCHLI
                     GLELGITVANIALRGEATGATRDFRGDVVATAKRDLAPGERLDGEGGYMVYGKLMPAA
                     QSLAVNGLPIGLAHDVVLKEAVRATQTVRWQDVAFDASNQAISVRREMEEMFRGKNCA
                     "
BASE COUNT          925 a         1519 c         1666 g         1033 t
ORIGIN      
        1 ctgatcctgc cagcccagcg cttcggcgtt gataatggtg gcggattgga tcgcccgtgc
       61 gggactcatg tgtgcctgct tcacgaacga ctcgatttcc agcgcctgcg tcccgtgcgg
      121 gaaggtcgag ccgtcgaccc cgctgccgac catgatcctg agccccttgg tgctgcccgc
      181 catagtaacg gccttctcga agatcgggat catgcggtac ttgccgccgg tattccggtt
      241 gtcgttgtcg tccatatagg gctcggtgta gcgcaccagc gtcgggtcgt agaagaggcc
      301 ctttgccacc atggtgtcgg cctgctcttg aattagcccg taggcgtgct ccaccgtgtc
      361 gcagccggcc acgatggcgt tcgtcagtcc ttcgcccccg aacacatggc agccggtctt
      421 gcggccaagg cggtgcgatt cctcgatcag cgcctgcaac accggcagcg gataggtggt
      481 gacgtattgg ggctcaccgt tgggcgcgaa cgaataagcg ccgccgggga acagcttgat
      541 ccaatcagcg tcgtgctcca catgctcgcg caccgccgcg cgggcttcat cggccgagcg
      601 caccacgatg ctggtcaacg ggttgacggg cgcggtcgcg ggattggcgc cccacacgat
      661 gccgcggccc gagaccttga agcgcggccc gtcgatgcgg ccctcgttga tggcgttacg
      721 gatatcgacg tcgccgtatc cattgccgtg cgagctcatg tcgcgcgccg ccgtgaagcc
      781 ggcgtagagg tcagcctgca aattctggat ggcgatgagg gtcgaggttt cccgcgacat
      841 gccgggcttg ggattgttga acatatgggt gtgcgcgtcg atcatgccgg gcacgacggt
      901 cgcctggctg aggtcgatca cctgggcgcc ggccggaatt ttgatctgcg cttccgcgcc
      961 gacctcggtg atgcgctcgc cctgcagcag gataatttgc cggctcacca tctggccgga
     1021 cttgctgtcg aacaactggc ctgcacggat cgccaccacg cccggggccg gtacgcattt
     1081 gatggtgccg ccctcggagc catagcacgg cggcgcgccc gcgcctcgcc agggctttcc
     1141 gggcccgccc tcttgcgccc acagcgccgt cgccagcgac gtgacgccca acattccaag
     1201 tgccgccctc ttcaatgccg atgtgcgcat cgcgtgatcc tccgcaggaa tcgatccccg
     1261 ggatttgtct tcgccatccg ggtaagcggg cattatacat cgagccgcgt ccggtgtggc
     1321 cagtcctttc gcggtcggca gctcacggtc tggctctaac gcttccgggg cgcggactct
     1381 cgctcgcgag ccacaaacca aggaatgatg cggaaggaaa atgcggttac agattccggg
     1441 ttcgcgcaac agcgtgctcc ggaatgaccc cgatggggac ggactgccag tgccatgaca
     1501 ataccagcgg gacgatctct gctagtctgc ctgcgctgag gtggcgcgtc gcgcctcggg
     1561 gccagtcctg aaatacttcg tgccgagacc atggagtctc ggcacgagaa cttatatccg
     1621 cgcaaaatct tatttgtggt cccggtcgtc gtcccgatcg ccgaagtcga acatgtcgaa
     1681 cagatcccca atcgccggca tgttagtcgg cacataggga ctatcatcgt ccgccttcgg
     1741 gtcgggcagg ttgtcacggc tgcgcgtcgt gagcttgccg agatgccaat tgcgttccac
     1801 gaacttcacg aaagacgaat gttccgtgta gctgtgcgta acgcggccgc cggtcgagaa
     1861 cggcgatacc gcgatcatcg gaatacgtgg accggtgccg aagaaatcga ccggctggat
     1921 gaagccggag tcgtagtagc cgccaccctc atcgacggtg acgaagatcg cggtctcctt
     1981 ccactgctcc ttgttgcttt gggcgagctt gatgatgttg tcggcaaacg cctcgaacaa
     2041 gccccacttg gaggatgctg gatggccgtc catggcgccg tccggtttta cataggacac
     2101 agccggcaag gtgccgttct tgagatcggt gaacagatcg gtcacgtcgc gcatgtggtc
     2161 ggcgcgcagc gacggatagt tcgcctgatg ctcgaacggg ttgcagatat cgcaatagcc
     2221 gttgatcggg ttaccggcga ccgccagatt gtagccgccg ccgtaatatt tccacgggat
     2281 gttgtggtcg ttgagttcat ccccgatgct gcggatgaag accggcggga tgatgttgtt
     2341 ggtcggattg gtgttgttgg gcaccccgtt cggaaggccg ccgggcgtga aggccggcgt
     2401 gatgttgacc gctgggtaat agtggcccgg atcgcacatg ggcgaaatct catagggcag
     2461 cgccttcaga taatccgcga tcgccttgat gcccgcggcg ctctcatccg agcaattgaa
     2521 ccattgtgcg cgctgcgtgt agaagtttag gcttgcgggt tgcggatcgg gattgtagat
     2581 gcgggttgcg attggggtgg cggccttgcc ggtcgagtcg ccaaaaaaga tctggtctgc
     2641 aaacccgagc ggaatgctgt cgggtccagt gccgcccatc accggctggt ggtagttgtc
     2701 gctgatggtg tactggtcgg caagccgctt ggtgatcggc gcgtccccct tctgcatgtt
     2761 gaagaacgcc atggtctggc ctgtgtcgtg gggtgttccg cccggcggcg ttgcgaaagt
     2821 tgtggtgatt gccgattgca gatcatgcag gcatccggtt gggttgcggc gcgtcacgtg
     2881 ctctttatcg atcgcgcaat ccatctgctg gtacatctgg aagaattgat ggatcgtgtc
     2941 gcccgtgaag gcgtcataag gcatcgtcgg ccccgtcaac tggaacggtc ccggcggaag
     3001 ggtgttgacg ttggcgatgc gcgtgtcggg gcccagcgtt gcggcgagcc ccgtaccgcc
     3061 ggtgccgaac aggaattgat cctgcggcgg caggcccgga tcgccacccg ggatgccgag
     3121 gatgaaagca agcggcgata ccgccggtac gcccgcgata tcgggtgggg gcagcgtcgt
     3181 gtaaagcgct ttgttcttga gatcggcgct gacgaagaat ttgccgaaat ttggcgccga
     3241 cgtaatctga aactgatggg ccttcgcaaa gtttggaccc ggcgtgccgt cggcgttgac
     3301 gattcgttgc gacagcaggt tcaggacttt cgcttctgca ttctttggcg cgtaggtggc
     3361 aaacagatga tcgaagctgc gattttcgcc gacgatgata atgacgtgtt tgatcggcga
     3421 tgcggttttg atcgcattga ccgccttgtc gggttcggcg gcgtgggtgg aagccgcaag
     3481 tgcagccgac gcaagcacga acgcggatgt gccgatgaat agtcgtcgac gcaatccagt
     3541 aagcgagtcg taatccattt aaacctccag ttttgagttg aaacaaaccc aaacgggaag
     3601 tttttattgg ctcgcgatga cggggatgtt ggagtcgcgt gacgcgacgg ataaactatt
     3661 gcgaaggaaa tgtgacaact gcgagcatgg ttcatgcgca attcttgccg cgaaacatct
     3721 cttccatttc gcgccgaacg ctgatcgcct gattgcttgc gtcgaacgcc acgtcctgcc
     3781 agcgcaccgt ctgcgtcgcc cgcacagctt ccttcagcac aacgtcatga gcgaggccga
     3841 tcggcaggcc gttgacggcc agcgactgtg cggccggcat tagcttgcca taaaccatgt
     3901 aaccgccttc gccatcgagg cgctcgccgg gcgcgagatc gcgcttcgcg gtcgccacca
     3961 cgtcgccgcg gaagtcgcgg gtcgcgcctg ttgcctcgcc gcgcagtgcg atgttggcga
     4021 ccgtgatccc gagctcgagg ccgatcagat gacagggctt gtacatggca gcgtaacggc
     4081 cagtggaatc ggttttgagg ccgtattcgg caaaacactt gcgcacatag tcggacggcg
     4141 cctcaaaggt gacgtagacg ccccagcgca gatcgcgaaa tacaggccgc ccgtcgcgct
     4201 ccaatgacga caccacttcg acggttcccc gctgtgccag aacgccgcca tcgtgttgcg
     4261 gccgcagcac gctcggtaag tcgtcgacgc cgcaaggcgg aaagacgagg ccgccggcgg
     4321 cgggttccag gcctgccgca ttggcgaccg cggccatttc cagcgctgac tttgtgccgt
     4381 cgaggaacga gttgaacatc tgggcattaa aatcgccgcc ggcgacctgt ttctccgtga
     4441 aaccgtagtg gccccacacc gtttcgggcg tcgactgatg atagatcggc agatacttcg
     4501 tgcctttacc ggcgcatatc acctcgaagc cggcggtgcg cgcccaatcg atgagttcga
     4561 cgatcagggc gggctgatct ccatacgcaa acgagtacag aatgccggct gcggcagcac
     4621 gacgggcgag cagggggcct gccagtacat cggcctcgac gttgaccata acgatgtgcc
     4681 gccgatgctt gcagcacatg agcgcgtgac ggatgccggc cgcagggttg ccggttgctt
     4741 cgacgatgat gtcgatgcca tcggccgcga taacggcctc ggcgtcgtcg acgatgcacg
     4801 cggtgccgtc gcgcatggcc tcccgtagcg agccggcggc gtaacgttcc gccgaccagc
     4861 caatccgggc gcaggattga cgcgcacgcg cgacgttgag gtccgcgatg ccgacgatat
     4921 ggagaccggg gctgcgcggg gcctgggaga gaaacatcga gccaaacttg ccggccccga
     4981 tgacgccgat tcgcacggga ttgccggatt cggcacgcgc ggcgagtttg gcaaacaagt
     5041 tcatgcggac atgactcttt gggattcagc ggagacggtt aatcgacgaa gcatcatggc
     5101 acgaaagcgt gccgtcgcag aagccgctac attctgttcg cgt
//
LOCUS       DATILV010000064         6871 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1548563, whole genome shotgun sequence.
ACCESSION   DATILV010000064 DATILV010000000
VERSION     DATILV010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6871)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6871)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6871
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1548563"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2376
                     /locus_tag="VLJ17_01505"
     CDS             <1..2376
                     /locus_tag="VLJ17_01505"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: protein motif:HMM:NF003467.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HSV21685.1"
                     /translation="ETILYCLWDMGLKVGHATRSIDMCIRLANADMTIRTAILEARFL
                     LGDRALFDEMVTRFDKQVVQGTAAEFVAAKLVEREDRHRRSGQSRYLVEPNVKDGKGG
                     LRDLHTLFWIAKYVYRVRDSEDLIAQGVFNRTEYRLFRRCEDFLWAVRCNMHFVAGRA
                     EERLSFDIQRSIARRLGYVERAGMRDVERFMKHYFLVAKDVGDLTAILCAKLESRQAK
                     SVPMLNRVVARLRPSGRRTLRECPDFVIDNNRISIADPEVFERDPINLIRMFRLAQRH
                     VLAFHPDALHRATQSLKLIDRSMREDRQANDLFREILTARNNAEIVLRRMNEAGVLGR
                     FVPEFGQVVSMMQFNMYHHYTVDEHLLRCIGVLAEIEAGVNPEYALANDLMRTIQPSN
                     RDALYIALFLHDIAKGRVEDHSIVGAHIARKLCPRFGCSPAETETIAWLVENHLVMST
                     VAQSRDLSDRKTIENFSSIVQSLERMKLLTILTTADIRAVGPGVWNGWKAQLLRALYY
                     ETEPDLTGGFSEVDRARRVTMAQAEFRAELSDWRPEDVEGYMARLYPAYWLKVDLPHK
                     IAHARFVRAAEQDGRRLLATNVGFDAARGVTELTVLAQDNHRLLSTLAGACATTGANI
                     VDAQIYTTTDGMALDTIAISRAFDRDEDEGRRANRIAATIEGALQGDLRLPEVVAKRD
                     LPKGRIGAFAVEPEVIINNQWSNRYTVIEISGLDRPGLLYELTSTLSKLNLNIASAHV
                     ATFGERAVDVFYVTDLTGAKISSPTRNAAVKRALINLFTLPQDGERAASGM"
     gene            complement(2492..4021)
                     /locus_tag="VLJ17_01510"
     CDS             complement(2492..4021)
                     /locus_tag="VLJ17_01510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21686.1"
                     /translation="MTGFLADVGRGCLSLAPLTALALGAGLSCSSAQAPDRPIVAVLP
                     LENIAGDAAQDFFADGMTDEIAVALTGVRNLDVVARSSSFQFKQRDRDIKAIGTALNV
                     SYVVQGAARLTADRVHLNISLIQVRDAVQLWLQKYDARRSDIFDLREEIARNIAAALK
                     ISANPDDVQVGSRTANFDAYLDFLRAKVAARPRGAKPLADAAVLLEQVVATDPDFAPA
                     AALLAYDYALTPLFAPSLRGGMPEDERKVVERTVPRSDALARRATTLDPNSAEGFVAL
                     GYVHMVQKRMLAAEDAFRQALALNPNQADGLHGYSQLLAALGRIKESLAMREHLQKGE
                     PFVTNYTADTAEIYWLDGATEKAVAMLQPFRPGRTLELALVQASAGHYREAAAAIREM
                     PATNYPAGMTEAAAKILESAPAPAHAPSALPRVGNLSFAYMHVGAPERVLEFYEDEIS
                     ANYFQPISATWFWHPTYAAVRKTERFKKVVRDLGLVAYWQARGWPAQCRPTGANDFIC
                     N"
     gene            complement(4285..5406)
                     /locus_tag="VLJ17_01515"
     CDS             complement(4285..5406)
                     /locus_tag="VLJ17_01515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007609282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21687.1"
                     /translation="MKHQSLTVAVVLTVGMAVALPGKYLLGSAAVAQTPRALPTFEME
                     KDWPKVPPQWKVGDVSSFTTDAQGNIWLIHRPRTLKGDDLKKAAPPVMVFDVSGNFIK
                     AWGGEGTGYEWPQREHGIYIDYKGFVWLGGNNCPSNGLENLKPVADDQLLKFTQDGKF
                     VMQIGHSNQSKGNADSQNLHRPADEQVYAPTNELFVADGYGNHRVVVFDADTGAFKRM
                     WGAFGNKPEDDDHCEIVRKTNFDAPGPQQLSVVHSLRVANDGIVYVADRENRRVQMFS
                     NDGKFIKQVIKADTLFARSVAFSPDQEQQFLYVGDGEAIAILDRKSLEILGSIKVPGM
                     QGGGHLINTDAKGNIYIANTGKGMQKLAFKGMSAATAAR"
     gene            5712..6539
                     /locus_tag="VLJ17_01520"
     CDS             5712..6539
                     /locus_tag="VLJ17_01520"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV21688.1"
                     /translation="MLGIQSTRVEANAPAPVAYGESRWRVIARTVFPFVVVAAVWEIL
                     AHAEIFPMQLFPPVEAVVETLVRLTVAGILPHHALDTVLRLSGGFMLAAVAGVAVGIA
                     MGRWRVAEDVFLPLISIGAPIPGLAYAPLFLLWFGLGNLSAVLLVGFVSTFPIIFNTW
                     TGVKAVKEIWVRSAQAMGADNRRLFRHVILPGALPYILTGLRLGLAQAWRILVGVEML
                     AAVPWGLGWLIFGAREFLNTDVMLAGIVIIAIIGLALEKLVFQRIEAFTIVRWGMMT"
     gene            6536..>6871
                     /locus_tag="VLJ17_01525"
     CDS             6536..>6871
                     /locus_tag="VLJ17_01525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21689.1"
                     /translation="MTASPERWRMIGRATATLLVAAVFYEAVAQSGIFPGVLVPTLPK
                     VGRTLVNLLGDGTMLRHVFYTLVRVMCGFAFAIMVGLPLGILMARIRAVENFLMPLAS
                     ALMPIPSLAW"
BASE COUNT         1243 a         2168 c         2092 g         1368 t
ORIGIN      
        1 gagaccatcc tctattgcct gtgggacatg gggctcaagg tcggccatgc gacacggtcc
       61 atcgacatgt gtattcgcct ggccaatgcc gacatgacca tccgcaccgc gatcttggag
      121 gcgcggttcc tgctcggcga ccgtgcattg ttcgacgaga tggtcacgcg cttcgacaag
      181 caggtggtgc aaggcaccgc cgctgaattc gtcgccgcca agcttgtgga acgcgaggac
      241 cgccatcgcc gcagcggcca atcgcggtac ttggtcgagc ccaatgtcaa ggacggcaag
      301 ggtgggctgc gcgaccttca caccctgttc tggatcgcca aatatgtcta ccgggtgcgc
      361 gattcagagg atttgatcgc gcaaggcgtg ttcaaccgta ccgaatatcg gttgttccga
      421 cgctgcgaag acttcctgtg ggcggtgcgc tgcaacatgc atttcgtcgc cggccgcgcg
      481 gaggagcgcc tgtcgttcga catccagcgc agcatcgcga gaaggctcgg ttatgtcgaa
      541 cgcgccggga tgcgcgatgt tgagcggttc atgaaacact acttcctggt ggccaaggat
      601 gtcggcgatc tcaccgcaat cttgtgcgcg aagctcgaaa gccggcaagc caaatccgtt
      661 ccgatgctca accgcgtggt cgcccgcttg cgaccaagcg gacggcggac gctgcgcgaa
      721 tgcccggatt tcgtgatcga caacaaccgc atcagcatcg ccgacccgga ggtgtttgag
      781 cgcgacccga tcaacctcat ccggatgttc cggctcgccc agcgccacgt gctggcattc
      841 catcctgatg cgctgcaccg ggcgacccag tcactcaagc tcatcgacag atcgatgcgc
      901 gaggacaggc aggccaacga cctcttccgc gaaatcctca ccgccaggaa caatgccgag
      961 atcgtgctgc ggcgcatgaa cgaggcgggc gtcctcggtc gcttcgtgcc ggaattcgga
     1021 caggtcgtgt cgatgatgca gttcaacatg tatcaccact acacggtcga cgagcatctg
     1081 ttgcgctgca tcggcgtgct cgccgaaatc gaggccggcg tcaatccgga atatgccctt
     1141 gccaacgacc tgatgcgcac gattcagccg agcaatcgcg acgcgctcta tattgcgctc
     1201 ttcctgcacg acatcgccaa gggccgggtg gaggaccatt cgatcgtcgg cgcccatatc
     1261 gcccggaagc tgtgtccgcg cttcggctgc tcaccggctg agaccgagac catcgcgtgg
     1321 ctggtcgaga accaccttgt gatgtcgaca gtggcccagt cgcgcgatct ttcggatcga
     1381 aagacgatcg agaatttctc gtcgattgtg cagtcgctcg aacggatgaa actgcttacc
     1441 atcttgacca ccgccgacat ccgcgccgtc ggccccggcg tgtggaacgg ctggaaggca
     1501 cagttgctac gcgcgctcta ttatgaaacc gagcccgacc tcacgggcgg cttctcagag
     1561 gtcgaccggg caagacgtgt cacaatggca caagcggaat ttcgtgccga gctatccgat
     1621 tggcgccccg aggacgtcga gggctacatg gctcgcctct atccggccta ttggctcaag
     1681 gtggatttgc cgcacaagat cgctcatgcg cggttcgtgc gcgccgccga acaggacggc
     1741 cgtaggcttc ttgccaccaa cgtaggattt gacgctgcgc gcggcgtcac cgagctcaca
     1801 gtcctcgcgc aagacaatca ccggctgttg tcgactctcg ctggcgcctg tgcaaccacg
     1861 ggcgccaaca ttgtggacgc ccagatctac accacgaccg acggcatggc cctcgacacc
     1921 atcgcgatca gccgggcatt tgaccgcgac gaggacgagg gacgccgcgc caaccgcatc
     1981 gccgcaacca tcgaaggggc gttgcagggc gacctacggt tgcccgaagt ggtggccaaa
     2041 cgggacttgc ccaaaggccg catcggtgca ttcgcagtcg aaccggaggt aatcatcaac
     2101 aaccaatggt cgaaccgcta cacggtcatc gaaatcagtg gattggaccg gcccggcttg
     2161 ctttacgagc tgacctccac tttatcgaag ctcaatctca atatcgcttc ggcccatgtg
     2221 gcgacgttcg gcgaacgtgc cgtcgacgtg ttttacgtga ccgatctcac tggcgcgaag
     2281 atctcctcgc cgacacgcaa tgctgcggtt aagcgcgcct tgatcaacct gttcacgctg
     2341 ccgcaggacg gggaaagagc agcgtccggg atgtaagcgc ctgaggcacc gccggtagga
     2401 acattgtcag ccgccgtacg gccggcaaag cgaagcgtgc ccaccccggc cttggtgagc
     2461 acgcttcgct tcccacccta cgaccgatcc gtcagttgca aataaaatcg ttcgctcccg
     2521 tcggacggca ctgcgccggc cagccgcgag cctgccaata cgcgaccagc cccagatcac
     2581 gcaccacctt tttgaaccgc tcggtcttac gcaccgccgc ataggtcgga tgccagaacc
     2641 aggtagcgga aatcggctgg aaatagtttg cgctgatctc gtcctcatag aattccagca
     2701 cgcgctccgg cgcccccaca tgcatgtagg cgaaactcag attaccgact cgcggcagag
     2761 cggacggcgc gtgagccggc gccggcgcgg attcgagaat ttttgccgca gcctccgtca
     2821 tgccggccgg atagttcgta gctggcattt cgcgaatcgc agccgcggct tcgcgataat
     2881 gcccggcaga ggcctggacc agtgcgagtt ccagggtgcg cccgggacgg aacggctgca
     2941 gcatcgcgac ggccttctcg gtcgcgccgt cgagccaata gatctcggcg gtgtccgccg
     3001 tgtagttggt aacgaacggc tcgcctttct gcaaatgctc acgcatcgcc agcgattctt
     3061 tgatgcgtcc gagcgcggcg agaagctggc tgtagccatg caatccatcg gcctggttcg
     3121 gattgagggc gagcgcctgc cggaaggcgt cctcggccgc cagcatccgc ttctgcacca
     3181 tatggacgta gccgagcgct acgaatcctt ctgcgctgtt cgggtcgagc gtggtggcgc
     3241 gccgggcaag agcatcgctg cgcggaaccg tccgctccac aactttgcgt tcgtcctcgg
     3301 gcatgccgcc gcgcagcgag ggcgcgaata gcggggtcag ggcatagtcg taagcaagca
     3361 gcgcagctgc gggtgcaaaa tcgggatcag tcgccaccac ttgctccagc aacacggcag
     3421 catcggccaa cggcttggcc ccgcgcgggc gagccgcgac cttggcacgc aaaaaatcca
     3481 gatatgcatc gaaattagcg gtgcggctgc ctacctgcac gtcgtcggga tttgcagata
     3541 tttttaaggc cgcggcgatg ttccgggcga tctcttccct taggtcgaag atatcggaac
     3601 gccgcgcatc gtatttctgc aaccacagct gtacagcatc acggacctgg atcaacgaga
     3661 tattcaagtg cacacgatcg gctgtgagcc gcgccgcgcc ctgtacgacg tagctcacgt
     3721 tcagtgctgt cccgatggcc ttgatatcgc ggtcgcgttg tttgaattga aatgacgacg
     3781 agcgcgccac gacgtcgagg ttccgcaccc cggtcagcgc aacggcaatc tcatcggtca
     3841 tcccgtcggc aaagaaatcc tgcgccgcat cgccggcaat gttttccagt ggaagcacgg
     3901 ccacgatcgg gcgatcaggt gcctgggcgg atgagcagga aagtcccgcg ccaagcgcga
     3961 gggccgttaa gggcgcaaga ctcaagcacc cccgccccac gtcagccaaa aacccggtca
     4021 ttcgtttacc ctcataggcg ctgcgttaga gcattttcga ctacgttgag ccattttcca
     4081 cggagtctcg gccgggttag ttcgaaccac gccttacttg ctcaagcccg gcaagaaaga
     4141 cgtggatgcc ccacgaagac ggggtccccg ccgcgcgact cggtgcctct gcgcgggcat
     4201 gatgagggga gagcttgatc gaaaacggac cgcaggccgc tgccggcggt ccgtcgcgtc
     4261 acccatcgcc cgcgcgctcg cgcctcaccg ggcggccgtc gcggccgaca ttcccttaaa
     4321 ggcaagcttc tgcatgccct ttccggtgtt cgcgatgtag atgttgccct tggcatcggt
     4381 gttgatcaga tggccgccgc cctgcatgcc gggcaccttg attgatccca gtatctcgag
     4441 ggacttgcga tccaggatcg caatcgcttc gccgtcaccc acatagagga actgctgctc
     4501 ctggtcgggc gagaatgcca ccgagcgcgc gaacagcgta tcggccttga tcacctgctt
     4561 gatgaatttg ccatcattgc tgaacatctg gacgcggcgg ttctcgcggt cggccacgta
     4621 gacaatgcca tcgttggcga cgcgcagcga atgcaccacg ctgagctgct gcgggcccgg
     4681 agcatcgaag ttggtcttgc gtacgatctc gcaatggtcg tcgtcctcag gcttgttgcc
     4741 gaaggcgccc cacatccgct tgaacgcgcc ggtgtcggcg tcgaacacga caacgcggtg
     4801 attgccgtaa ccgtccgcca cgaacagctc gttggtcggc gcatagacct gctcatcggc
     4861 ggggcgatgg aggttctggc tgtcggcgtt gcccttgctc tggttgctgt ggccgatctg
     4921 catgacgaac ttgccgtctt gagtgaactt taggagctga tcgtcggcca caggtttaag
     4981 attttcgagg ccgttgctgg ggcaattgtt gccgccgagc caaacgaaac ccttgtagtc
     5041 gatatagatg ccgtgctcgc gctgcggcca ctcataaccg gtgccttcgc ctccccaggc
     5101 cttgatgaag ttgccgctga cgtcgaacac catcacgggc ggcgcggcct tcttgaggtc
     5161 gtctccctta agtgtgcgcg gacggtgaat cagccagatg ttgccttgcg cgtcggtcgt
     5221 gaaacttgac acatcgccga ctttccattg cggcggtacc ttcggccaat ccttttccat
     5281 ctcgaaggtc ggcagcgccc gcggcgtctg agcaacagcg gccgagccga gcaaatactt
     5341 gcccggcaag gccaccgcca ttccgaccgt aagcacaacc gcaacagtga ggctttgatg
     5401 tttcatggct ttcctctctc agtttgttat tgggaattgc gcgaaaattg ttcgttgaat
     5461 ggcctgagcc ggtggccacc ttctgcccag acgtgtgttt tttttcgggg ctcggttgac
     5521 ccggaactgg acgcaaccgc agttcggact cctcaatcgc gacagcccca cacctcccac
     5581 ggtgggtagc gcttattggg ctcctggtgg cccctcgtgt caaggcgctg ccggcaacga
     5641 ccgccgcgac ttgctgcgct gctgcgggac cttaggcttg ccccaccgcg tcaactcggc
     5701 gacagttgcg catgcttggt atccagtcca cccgtgtcga agcgaatgcg ccggcaccag
     5761 tcgcctacgg cgaaagccga tggcgagtga tcgcacgcac cgttttcccg tttgtggtgg
     5821 tggcggcggt ctgggaaatt ctggcgcacg ccgaaatttt tcccatgcag ttgtttccgc
     5881 cagtcgaagc cgtggtcgag acgttggttc ggctgaccgt cgcgggcatt cttccacatc
     5941 acgccctcga caccgttctg cggctttcgg gcggcttcat gcttgccgca gtggccggcg
     6001 tcgcggtcgg gatcgccatg ggccgatggc gggtggccga agatgtgttc ctgccgctga
     6061 tcagtatcgg ggcaccgatt ccggggctcg cctatgcgcc gcttttcctg ctgtggttcg
     6121 gcctcggcaa cctgtcggcg gtgctgctgg tcggctttgt gtcgaccttc ccgattatct
     6181 tcaacacctg gaccggcgtg aaggccgtca aggaaatctg ggtgcggtcc gcccaggcca
     6241 tgggggccga caatcgacgg ctgttccgcc acgtcatctt gcccggcgcg ttgccctata
     6301 tcctcactgg cctgcggctc gggcttgccc aggcgtggcg catcctggtc ggggtcgaaa
     6361 tgctcgcggc cgtaccgtgg gggctcggct ggctcatatt cggggcgcgc gagttcctca
     6421 acaccgatgt aatgctggcc ggcatcgtga tcattgcgat catcggtctg gcactcgaaa
     6481 agctagtgtt tcaacggatc gaagctttca ccatcgtgcg atgggggatg atgacatgac
     6541 ggcctccccc gagcggtggc gcatgattgg ccgtgccacc gccaccttac tggtggcggc
     6601 ggtattctat gaagcggtgg cgcaaagcgg catcttcccg ggcgtactgg tgccgacgct
     6661 gccgaaggtc gggcgcacac tcgtcaacct cttgggcgac ggcaccatgt tgcggcatgt
     6721 tttctacacc ctcgtgcggg tcatgtgcgg cttcgcgttc gccatcatgg tgggactgcc
     6781 gctcggcata ctgatggcgc ggattcgtgc ggtcgagaac tttctcatgc cgctcgcgag
     6841 cgccttgatg ccgatcccgt cgctcgcctg g
//
LOCUS       DATILV010000065         2486 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3337995, whole genome shotgun sequence.
ACCESSION   DATILV010000065 DATILV010000000
VERSION     DATILV010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2486)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2486)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2486
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3337995"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1792)
                     /locus_tag="VLJ17_01530"
     CDS             complement(<1..1792)
                     /locus_tag="VLJ17_01530"
                     /inference="COORDINATES: protein motif:HMM:NF011501.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit B"
                     /protein_id="HSV21690.1"
                     /translation="MPQDLTLSQRSEKYDASKIDKLEGLAGVRQRPGMYIGPTDERGL
                     HHCVFEVLDNSIDEHLAGYCSRIDVTLHVDGSCSIKDNGRGIPVDIHPKFKVPAIELV
                     LTNLHAGGKFGQGAYKFSGGLHGVGAKCVNALSDWFKVEVSRDGKVYHMAFARGVTTQ
                     KLTVIGDLKNKKHTGTLITFLPDPTIFNITTEFQFPKLAARLRELAFLNPGLEINLTD
                     ERTEPPKHEQYLYKLGIEEFVRQLGENKQILHAKPIVLEGRRRVRFRNKDQQEVEDDM
                     FVDLVMQYNDSYNDQILCFTNAIPNPDGGTHATGFRTALTRAINQYARQNNLVKEKDP
                     PISGDDVREGLIAILSIKHPWPGFESQTKVKLVTPEVEGIVSSITYEGLMTFFDQTPS
                     VARRIVDKGLTAARAREAARKARETVRKGALTGGGLPGKLADCSERDPTLTELYIVEG
                     DSAGGSAKQGRDRRYQAILPIRGKLINVEKARLDKVLQNSEIQTMITAVGTGIGSGDQ
                     EGAFNIAKLRYGRIIIMTDADVDGSHIRTLLLTFFYRQMPELVKQGKIFIACPPLYLI
                     KRKKREEYVDDDAQLNRILISLGAEEVKLKN"
     gene            2074..>2486
                     /locus_tag="VLJ17_01535"
     CDS             2074..>2486
                     /locus_tag="VLJ17_01535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21691.1"
                     /translation="MTRARIIAEHPGTLVTRHAFENYPYGIRPHTTAPMDYLIVGFGR
                     LLGARVDLDLAGAWISPALGALLILLAGLWAEAMAIPYRWSMMVLLSTSPVILHGFAV
                     GRPDHQSLILLLTASGLMAEAVLWTRRSTALSFWWG"
BASE COUNT          477 a          705 c          700 g          604 t
ORIGIN      
        1 gattctttag tttgacctct tccgcgccga gagaaatcag gatccggttg agttgcgcat
       61 catcatccac gtattcctcg cgtttcttgc gcttgatcag atagagcggc gggcaagcga
      121 tgaaaatctt gccttgtttg acgagctccg gcatctgccg gtagaaaaac gtcagtaaca
      181 aggtgcgaat gtgcgatccg tcgacatcgg catccgtcat gataatgatg cggccatagc
      241 gcaacttggc gatgttgaat gcgccctcct ggtctccgct gccgatgccc gtgcccaccg
      301 ctgtgatcat ggtttggatc tccgagttct gcaggacctt gtccaagcgc gctttctcga
      361 cgttgatcag cttgccacga atcggcagaa tcgcttgata gcgacgatcg cggccttgct
      421 tggcggagcc tccggccgaa tcgccctcga caatgtacag ctcagtgagg gttggatcgc
      481 gctccgagca gtcagccagc ttgcccggga gccctcctcc ggttaaggca cccttgcgaa
      541 ccgtttcgcg tgcctttctg gctgcctcgc gggctcgggc cgccgtcagg cccttatcca
      601 caattcgcct ggccaccgac ggcgtctggt cgaagaatgt catcaatcct tcgtaagtga
      661 tcgaggagac gatgccctcg acctccggcg ttacgagctt cactttggtt tgggactcga
      721 agccgggcca cggatgcttg atcgagagaa tggcgatcag gccttcgcgg acgtcgtcgc
      781 ctgaaattgg cgggtctttc tccttcacca ggttattctg gcgggcatat tgattgatcg
      841 cccgcgtcaa agcggtgcga aacccagtcg cgtgcgtgcc gccatcaggg tttggaatgg
      901 cgttggtgaa gcagaggatc tgatcgttgt agctgtcgtt gtactgcatc acgagatcta
      961 caaacatgtc gtcctcgacc tcctgctggt ccttgttgcg aaatcggacc cgacgcctgc
     1021 cttcgagaac aatcggtttg gcgtgcagga tctgcttgtt ttcgcccagt tgtctgacga
     1081 attcctcgat cccgagttta tacaagtatt gctcgtgctt cggcggttcc gtgcgctcgt
     1141 cggtgagatt gatctccagt ccggggttaa gaaaggccaa ttcgcgcaat cgcgccgcga
     1201 gcttcggaaa ctggaactcg gtcgtgatgt taaagatcgt aggatcgggc aaaaacgtga
     1261 tgagcgtgcc ggtgtgcttc ttgttcttga gatcgccgat cacagtgagt ttctgcgtcg
     1321 tgacgccccg tgcgaaagcc atatgataga ccttgccgtc gcgagaaacc tccaccttga
     1381 accaatcgga aagcgcgttg acacacttcg cccctacccc gtgtaaccca ccggagaact
     1441 tgtaggctcc ttgcccaaac ttcccgcccg cgtgcaaatt tgtgaggaca agctcgatcg
     1501 ccggcacctt gaacttggga tgaatatcta ctggaatgcc gcgtccgtta tcctttatcg
     1561 agcatgatcc gtcgacatgc agggttacgt cgatgcgtga gcaatagcca gccagatgct
     1621 cgtcaatcga gttgtcgagc acctcaaaga cacagtggtg caagcctcgc tcgtcggtcg
     1681 gcccgatata cattcccggg cgctgacgga ccccggcaag cccctcgagc ttatctattt
     1741 tggaagcgtc gtacttttct gatctttggg aaagcgtcaa atcttggggc atcaaaatct
     1801 cggacaaatc tgcaagttcg tataaagcct ccaacatacg aatgctcggc ttgatacaca
     1861 atgttttttt accctagaaa gccgtccaat atgcagtatt tagtgggacc ggccgctggg
     1921 tcccacaaga tattggggct gacgagaaaa cttgcgtcgt tcgccggaat tgccgtttgc
     1981 ctgggcatct ttggctacct tcaggcccaa aaggctcggt ttgtgttctt gccggacgga
     2041 gtgcacttcg tagacgcgga ctgctattca cggatgacgc gagcgcgaat tatcgcggag
     2101 caccccggca ctctggtcac gcggcacgcg ttcgagaact atccctatgg aattcgtccg
     2161 cacacgactg cgccaatgga ctacttgatt gttggattcg gtcggcttct cggcgccaga
     2221 gtcgatctgg atctcgccgg tgcatggatc tcgccggccc ttggcgccct tctcatcctt
     2281 ctggcagggc tgtgggcaga ggcgatggcc atcccctatc gctggagcat gatggtgctt
     2341 ctttcgactt cgccagtaat ccttcacggt ttcgcggtcg gcaggcccga tcaccaatcg
     2401 ctgatcttac tcttgaccgc gagcggacta atggccgaag cggtcctgtg gacgcggcgg
     2461 tcgacggcgc tttcgttttg gtgggg
//
LOCUS       DATILV010000066         2295 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1293911, whole genome shotgun sequence.
ACCESSION   DATILV010000066 DATILV010000000
VERSION     DATILV010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2295)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2295)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2295
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1293911"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            149..988
                     /locus_tag="VLJ17_01540"
     CDS             149..988
                     /locus_tag="VLJ17_01540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV21692.1"
                     /translation="MQKPQPAGLRTVTAAASSPLLAVRNIDVVYDKVIMVLRSLSLEV
                     PMGEIVALLGANGAGKSTTLKAISGLLKTEDGEVTRGEILFRGERIDGLDPDRIVRHG
                     IFQVMEGRRIVSDMTPLENLRLGAFTRRDNEVAADIDMVFEYFPRLKERTGRAGYLSG
                     GEQQMLAIGRALMARPKMILMDEPSMGLSPLLVKEVFGIIKRINRDLGVTILLVEQNA
                     RAALSVARYGYVMEQGKVVLDGTADELRDNEDVKEFYLGGAGDQRKSFKNLKSFKRRK
                     RWL"
     gene            993..2216
                     /locus_tag="VLJ17_01545"
     CDS             993..2216
                     /locus_tag="VLJ17_01545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008136183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HSV21693.1"
                     /translation="MNAFYDSLETRDPAEREAHLFSCLPSVLRAAMAAPAYAERLRGI
                     DPAAIADRATLARLPVLRKSDLPALHKANPPFGGLVPQPPGSFARLFISPGPIFEPEG
                     TEHDVWRSARSLFAAGFRKGDIVINTFSYHLTPGGFIFDSAARALGCAVIPAGAGTLD
                     QQYELIEAYRPIDYCGTPDFLKILLDGGAKANRDTSSLKRALVSGAAFPTSLQGEVKS
                     RGIDAYQYYGTADLGLVAYETPAREGMVVNEGIILEVVRPGTGDPVADGEVGEVVVTT
                     LDPHSPWIRLALGDLSATLPGNSPCGRTNMRIRGWLGRADQTTKVKGMFVRPEQIAEI
                     GKRHPELGRLRLVVTRAGEVDVMTLKAECTASGEAIRDAVTATLRTVTKLGGTVELVT
                     PESLPNDGKVIADQR"
BASE COUNT          445 a          694 c          723 g          433 t
ORIGIN      
        1 gctcgggtgg tagcaagtaa atcttcgtcc ctgaaaaggg gaggatcgga gggtggggtc
       61 gcgcaaagtg attccccacc cagttggttt gcgcacacca attcccctct acaaacgagg
      121 taaccatcac cgattgagcg acaatctgat gcaaaaacct cagccagctg gtctccgcac
      181 tgtgacggct gccgcatcaa gcccgctgct cgcggtacgc aacatcgacg tcgtctacga
      241 caaggtcatt atggtgttgc ggagcttgag cctcgaagtg cctatgggcg agatcgtggc
      301 gcttctcggc gccaacggcg ccggcaagtc gacaacgttg aaggcgatct ctggcctgct
      361 caagaccgag gatggcgaag tcacccgggg cgagatcctc tttcgcggcg agcgcatcga
      421 tggcctcgat cccgaccgca tcgtccggca cggcatcttc caggtgatgg aggggcgccg
      481 catcgtcagt gacatgaccc cgcttgagaa tctgcggctt ggcgccttca ctcgccgcga
      541 caacgaggtc gccgctgaca tcgatatggt ctttgagtac ttcccgcggc tgaaggagcg
      601 cactggacgc gctgggtatc tctccggcgg cgagcagcaa atgctggcga tcggccgcgc
      661 attgatggcg cggccaaaga tgatcttgat ggacgagccg tcgatgggct tgtcacccct
      721 gctggtgaag gaggtatttg gcatcatcaa gcgcatcaac cgcgatctcg gggtcacaat
      781 tcttctggtc gagcagaatg cgcgagccgc actttcggtt gcgcgctacg gctacgtcat
      841 ggagcagggc aaggtcgtgc tcgacggcac tgccgacgaa ttgcgcgata acgaggacgt
      901 aaaggaattc taccttggcg gcgccggcga tcagcgcaag agcttcaaga atttgaagag
      961 cttcaagcgt cgcaaacgat ggttgtgagt cgatgaacgc gttctacgac tccctggaaa
     1021 cgcgcgatcc ggctgagcgc gaggcccacc tgttctcgtg cctgcccagc gtgctgcgcg
     1081 cggcgatggc ggctccggct tatgcggagc ggctcagagg aatcgatccc gccgccattg
     1141 ccgaccgggc cacgctagcg cgtctgccgg tcctgcgaaa atccgatctg ccggccttgc
     1201 acaaggccaa cccgccgttc ggcggcctcg tgccgcagcc gccaggatcg ttcgcgcggt
     1261 tgtttatttc gccggggcca atcttcgagc cggagggcac ggagcacgac gtctggcgca
     1321 gcgcacgctc gctctttgcc gccggattcc gcaagggcga catcgtcatc aacacattta
     1381 gttatcacct gacgcccggt ggcttcattt tcgatagcgc ggcccgtgcg ctcggctgcg
     1441 cagtgatccc ggcgggggcg ggcacccttg atcagcaata cgaattgatt gaagcctatc
     1501 gaccgatcga ctactgcggc acgccagatt ttctgaagat tctactcgac ggcggtgcga
     1561 aggcgaaccg cgacacgtca tcgctcaagc gtgcattggt gagcggtgca gcgtttccaa
     1621 cgtcgctgca aggcgaggtg aaatcccgtg gtatcgacgc ataccagtac tatggcaccg
     1681 ccgacttggg tctggttgcc tatgagacgc cagcgcgcga gggcatggtc gtcaacgagg
     1741 gcatcatcct cgaggtggtg cggcccggga ccggcgatcc tgttgccgac ggcgaagtcg
     1801 gggaggtcgt cgtcaccacg cttgatccac atagtccctg gatcaggctc gcccttggcg
     1861 acctcagcgc taccctgcca ggcaatagtc cgtgcggtcg caccaacatg cggatcaggg
     1921 gctggctcgg gcgtgctgac cagactacca aggtcaaggg catgtttgtc cgccctgagc
     1981 agattgccga gatcggcaaa cgtcatccgg agctcggaag gctccgactt gtggtcactc
     2041 gcgccggaga ggtcgacgtc atgacgctga aggcggaatg cactgcatcc ggcgaagcga
     2101 ttcgcgacgc ggtgaccgcc acccttcgaa cggtaacaaa gcttggcggt accgtcgagc
     2161 tggtgacgcc ggaatcgcta cccaacgacg gcaaggtgat tgccgaccag cggtaagcag
     2221 tctgaccttt atgcaggaaa gctgcagacg gacgcgttca acggctgccc acgccgccga
     2281 tttctctcac gaagt
//
LOCUS       DATILV010000067         3510 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1804564, whole genome shotgun sequence.
ACCESSION   DATILV010000067 DATILV010000000
VERSION     DATILV010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3510
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1804564"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..216)
                     /locus_tag="VLJ17_01550"
     CDS             complement(<1..216)
                     /locus_tag="VLJ17_01550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21694.1"
                     /translation="MLLLLLPCPAIMYLAASLEELNASSQCLSSPEAVRQEYPGAWPS
                     WTMQEPNHKGTKCWFPAMRENRSRRVET"
     gene            complement(604..987)
                     /locus_tag="VLJ17_01555"
     CDS             complement(604..987)
                     /locus_tag="VLJ17_01555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21695.1"
                     /translation="MSFAMRFVPLFALLFTPFCTSAQATDYEVGASLVCDTQAQVERF
                     VALFSGDAKAAIRVVNAEEQNPSACAIVKVAYMRGPQITMARNGESAFEIARILVVGV
                     ETEDGIQAVRPAVYFSLFGVKEYAI"
     gene            complement(1220..1705)
                     /locus_tag="VLJ17_01560"
     CDS             complement(1220..1705)
                     /locus_tag="VLJ17_01560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012029869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV21696.1"
                     /translation="MSKIARFISAGVILCIGAIPVAQAAYLSKENIRSDRLASPRRII
                     ALAHRGDAHAQAILGFMYEHGRGVPQSYNVAVDWYLQSAERGDPTGQYLLGLMYNKGF
                     GVTQNVILAYMWLNLAAAHTPLQQRENILRLREAVASKMTQAQLDLAQQLAVDFVPSR
                     P"
     gene            complement(1728..2372)
                     /locus_tag="VLJ17_01565"
     CDS             complement(1728..2372)
                     /locus_tag="VLJ17_01565"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A24 family peptidase"
                     /protein_id="HSV21697.1"
                     /translation="MILTPSLPSLARWCAVVSRTASAMRGGDIIVFAGAASVGIVTSV
                     ILAPDLRGILGAGLAVLMIAVAAADARRFIIPDELSAAALALGLVYAAMEDTEVWAQA
                     LAWSALRGATSALIFLGVRILYRRLRGRDGIGLGDVKLAGVAGVWLDWSFIPIAIEIA
                     AVAALGAYLIRHFYFRRAIRPTTRMPFGLFLAPAIWISWLLERILLLYPSATSF"
     gene            complement(2419..>3510)
                     /locus_tag="VLJ17_01570"
     CDS             complement(2419..>3510)
                     /locus_tag="VLJ17_01570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspD"
                     /protein_id="HSV21698.1"
                     /translation="SSFSTLGRQTQQATDTSALEGRAAGAGGGGQPLLEGVRITPDTA
                     GNALLIYASQENYQIIERTLVQLDRPQLQVAIDATVAEVTLNDQLTYGVQFFLQSKQS
                     GVRGTASNIPTSPPGLPSTSPFDGSLVNSAGLVGAALNRAFPGFNFLIGSESTPNVVL
                     DALHAVTTTKVLSNPSLVVIDNQVATLMVGSDVPISTGTANVLTTSNTIVNTIDYRTV
                     GIILRVVPRVNANGNVRLDIEQEISQVQNTTGTNTTNLTPTVTQRKVKSSIGVASGQT
                     VLLAGLIQEQQDLTRGGIPILDQIPGLGDAFSHQNKTNTRTELIVFIRPQIIRDSVDA
                     SFVGEELRTKLRGVIGPVAPDVMAAPKAR"
BASE COUNT          733 a         1048 c         1056 g          673 t
ORIGIN      
        1 tgtttctacg cggcgggaac gattttcgcg catcgctgga aaccagcact tggtcccctt
       61 gtgattgggc tcctgcatgg tccacgacgg ccatgcaccc ggatattcct gccgaacggc
      121 ctccggcgag gacagacact gtgaggaagc gttcaattcc tccaaggacg ctgccagata
      181 catgatggca ggacacggta gcagaagaag aagcacggta ccgcgggaca aagccatgca
      241 agcacccctt cctgtacaac ctcggatttg acacgacatc ggccacccgt gatgcaaggc
      301 aaccgatggt cctctattcc tccgatgaaa gggcatcgtc ggggctggga gacgtcccta
      361 attgggcttt ttgtcctgta gcggggctct tggatttcgg gatttccttg caaatcaatt
      421 taaatttgct gattcaatgg cagctttgcg gttgtttgtg cgacgcaacc ggtggtcacc
      481 gcggcacaaa ttgttgcatt ggccgaatca cctggcaaaa tttcaccgct ggatggggtg
      541 aaactcacca ctccggggcg agcggccggc gtccgtttcc acgtcacgcc ggtgccgcct
      601 cccttagatc gcgtactcct tgacgccaaa aagcgagaaa tagaccgcag gacgaaccgc
      661 ttggatgccg tcttcggttt cgaccccgac caccaggatg cgggcgatct cgaaagcgct
      721 ctcgccgttt cgcgccatgg tgatttgcgg gccgcgcata taagcgactt tcacgatcgc
      781 acaggcactg ggattttgtt cctcggcgtt cacgacgcga atggcggcct tcgcgtcacc
      841 ggagaacaag gcaacgaagc gttccacctg cgcttgggta tcgcagacga gactggcgcc
      901 gacctcataa tccgtggcct gcgccgacgt gcagaacggg gtgaacaaca gtgcgaacaa
      961 cggtacgaag cgcattgcga agctcatctg agcctcctgt catggcaagg ttcaattccc
     1021 ttcccacagt tgtcacgcgg cgccaggcgc aggttcattg cggtaatcgg caggcgcacg
     1081 cctgatgtga cgccggccgc accgcctggt ggacggccac aagatctccg acagtttgaa
     1141 ttgcagtggc gttcaggcgc gtcggtcagg ctgcacccgt cgacggcatc taaaacctgc
     1201 tcttattgcg acaccgcgat cagggccgac ttggcacgaa atccaccgcc agctgttggg
     1261 caaggtcgag ttgcgcctgg gtcattttgc tggccacggc ttcgcgcagc cgcaagatat
     1321 tttcacgctg ctgcagcggc gtatgtgctg ccgcaaggtt gagccacata taggccagaa
     1381 tgacattctg ggtgacgccg aagcctttat tgtacatgag cccgagcaga tactggccgg
     1441 tcggatcgcc ccgctcggcc gactgcaaat accagtcgac cgccacattg taggactgcg
     1501 gaacgccgcg gccgtgttca tacatgaagc ccaggatcgc ctgggcatgg gcatcgccgc
     1561 gatgagccaa tgcgatgatc cgtcttggcg aagccaatcg atcactgcga atgttctctt
     1621 tcgagaggta agcggcttgt gcaaccggga tggcgccgat gcaaagaatg actccggcag
     1681 agatgaaacg tgcgatcttc gacatgagtt ctctccggcg attctcctta gaacgaggtg
     1741 gctgaaggat ataggagcag tatcctttca agaagccagc tgatccagat tgctggcgcc
     1801 aggaacaggc cgaatggcat tcgcgtggtc ggcctgatag cgcggcggaa gtaaaagtgc
     1861 cggatcaggt aggcccccag cgctgcaacc gctgcgatct cgatcgcaat aggaatgaac
     1921 gaccagtcaa gccacacgcc ggcaacgccg gcgagcttga cgtcaccaag cccgatgcca
     1981 tcgcgtccgc gcagccggcg atagagaata cgcacgccga gaaaaatcag cgctgacgtg
     2041 gcgccacgca atgccgacca cgcaagggcc tgcgcccaga cttcggtatc ctccatcgcg
     2101 gcgtaaacga gaccaagcgc gagcgccgcg gcgctcaatt catccggaat gatgaagcga
     2161 cgggcatcgg ccgccgcgac cgcaatcatc aataccgcta gaccggcgcc caagatacca
     2221 cgcaaatcgg gggcgagaat gacgctggtg acgatgccaa cggaggcggc gcctgcgaac
     2281 acaatgatgt cgccgccccg catggccgat gcggttcgtg aaacaacggc gcaccagcgc
     2341 gccagcgatg gcaatgacgg tgtcaagatc atccacgcgc tcgacgatga cgtccaccca
     2401 ttccgcggca tcgcggaact aacgtgcttt cggtgcggcc ataacatccg gcgcaaccgg
     2461 tccgatgacg ccgcgcaact tggtacgcaa ctcctcgccg acgaaactgg cgtccacgct
     2521 gtcgcgaatg atctgcggcc gaatgaagac gatcagctcg gtgcgcgtgt tcgtcttgtt
     2581 ctgatgcgag aacgcgtcac ccaatccggg aatctgatca agtatcggaa tgccgccacg
     2641 ggtgagatcc tgctgttcct ggatcaagcc cgccagcaac acggtctggc cgctggcgac
     2701 cccaatcgaa ctcttcacct ttcgttgcgt gacggtcggc gtcagattcg tggtgttcgt
     2761 acctgtggta ttttgaacct ggctgatctc ctgctcgata tcgagccgca cattgccgtt
     2821 ggcattgacg cggggaacca cgcgcaggat gatgccaacg gtgcgatagt cgatggtgtt
     2881 gacaatggta ttgctggtcg tcagcacgtt cgccgtaccg gtcgagatcg gcacatcgct
     2941 gccgaccatc agggttgcta cctggttgtc gatgacgacg agtgaaggat tcgacagcac
     3001 cttggtggtg gtcacggcgt gcagggcgtc gagaaccacg tttggcgtgg attccgagcc
     3061 gatcaggaag ttgaaccccg gaaacgcccg attgagggcg gcgccgacca gcccggccga
     3121 gttcaccaac gagccgtcaa acggcgaggt cgatggcagg cccggcggcg acgtcggtat
     3181 gttcgacgcc gtgccgcgca caccgctttg tttgctctgg agaaagaact gaacgccgta
     3241 agtaagttga tcattgagcg tcacctcggc aacggtcgca tcgatggcga cctgcagctg
     3301 cggccgatca agttgcacca gggtccgctc gatgatctgg tagttttcct ggctcgcata
     3361 gatcagcaaa gcattgccgg ctgtgtcagg tgtgatgcgc accccttcca acaacggctg
     3421 accgccgcca ccggcgccag cagcgcggcc ctcgagggcg ctggtgtccg ttgcctgctg
     3481 cgtttgtcgg ccgagcgtgc tgaaagacga
//
LOCUS       DATILV010000068         2424 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2571946, whole genome shotgun sequence.
ACCESSION   DATILV010000068 DATILV010000000
VERSION     DATILV010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2424)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2424)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2424
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2571946"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(335..1099)
                     /locus_tag="VLJ17_01575"
     CDS             complement(335..1099)
                     /locus_tag="VLJ17_01575"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HSV21699.1"
                     /translation="MQKLNAATAVTAAFAGLALGAGAGAAELKILSAGAVQPGLNAAA
                     KIFFDKTGDLAKIAYDPATVLGKRVAGGEVADIIVSSPAVIAELTKTAKVLPEGQVPL
                     GKVGVGVVVREGAPAPDIASTQALKKALLDAEAVVYNTASSGAYVEDMLKKIGVFDEI
                     QGKLVRLFDGNAVMRRLVEGNGKEFGFGGITDIVLNRDKGVRLVGPLPAETQNYTSYT
                     AALIAILPNAQSARAFMTYLASRDGRALFAANGISE"
     gene            complement(1242..1364)
                     /locus_tag="VLJ17_01580"
     CDS             complement(1242..1364)
                     /locus_tag="VLJ17_01580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21700.1"
                     /translation="MACTLYALFAYRIGSYIPVPGIDPAAFERVMALKDRSVLS"
     gene            1561..>2424
                     /locus_tag="VLJ17_01585"
     CDS             1561..>2424
                     /locus_tag="VLJ17_01585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine acetyltransferase"
                     /protein_id="HSV21701.1"
                     /translation="MLKTFRAIGAVALLLVVNCASVYAPSQPPHQLYNEDDLKLESGE
                     VIKNFSISYVTHGTLNAKKSNAILMVTERQSSSSRLHDRTRQGARPGQIFHHRDRCHC
                     QRAAQQFDRAAAHVIPKVTIRDLVESRYRLLEEKFGIDQSSRSSVPRWAACRCRKWGV
                     SHPDMMDSLIAMVPLAKTPVWAVAVLETTVKAIMIDPAWNGGNYTSVPEKGVRLWLDI
                     LNLLAARTADQTQFKGGMHVLPWMAQQEDAMMKAFDANNWIYQTWAYEKHDIGTTPGF
                     DGNTAKALGSIK"
BASE COUNT          533 a          737 c          692 g          462 t
ORIGIN      
        1 acatgccagc gccggagcgg gtctctgctg agtttgattg atatcggctt tacgagagcc
       61 ctccctcagg agttttgctg aaagacggca gcactctccg tttactcacg cgaggccagc
      121 tgcggtcttg attgaatctt gagaaaatag ggctgggacg gagtttgcca tctattttcg
      181 tcaacattag acgcccaaca aggcctacaa tggcgtgagg gatcaaaaac ataaacgatc
      241 ggggcgcagg tccatcaatc tcggagcgcg cagtgaagac attgtctatc ggttcgaagg
      301 cggccccttt gcgtcagatg gaccagatgc ctgattattc cgagatgccg ttcgccgcaa
      361 acaaagcgcg gccgtcgcgc gaggcgagat aagtcatgaa cgctctcgcg ctctgcgcat
      421 tcggcaaaat ggcaattagc gcggcggtgt agctcgtgta gttctgagtc tcggccggca
      481 acgggccgac gagccgaacc cccttgtcgc ggttcagcac gatgtcggtg atcccgccga
      541 acccgaattc cttcccattg ccttcgacga gccgacgcat cacggcattg ccgtcgaaga
      601 gacgcacgag tttgccttga atctcgtcga agaccccgat cttcttcaac atatcctcga
      661 cataggcccc gctcgatgcc gtgttgtaca cgaccgcttc ggcatcgagg agcgccttct
      721 tcagcgcttg cgtgctcgct atgtcgggcg ccggagcgcc ctcgcggacg acgacgccga
      781 ccccgacctt gccgagcggg acttggccct ccggcagcac ctttgcggtt ttagtcaatt
      841 ccgcgatgac ggccggcgac gacacgatga tatcggcgac ctcgccgccg gcgacccgct
      901 tgccgagaac ggttgcgggg tcgtaggcga tctttgccaa atctccggtt ttgtcgaaaa
      961 aaatcttggc cgctgcattg agccccggct gcaccgcgcc ggcggacaaa atcttcagct
     1021 ccgccgcacc cgcgccggca ccaagcgcca gcccggcgaa cgctgcggtg accgcagtgg
     1081 cagcattgag cttttgcatt gcgacctccg cttcgttaaa gcaaatagca cgtagcacat
     1141 tgaccgaagc gacacgcggg atcgcgtcgc gtaggacaac ccagatatcg cttcgctgat
     1201 ccagattgca acgcgaccgg actgcgaaag ccgcgacaag gttacgacag caccgaacgg
     1261 tctttcaacg ccatcacgcg ctcgaaagcg gcgggatcaa taccgggaac cgggatatag
     1321 gagccgatac gataggcaaa gagagcgtat aaggtgcatg ccatgcgccg cccacgacag
     1381 accggcgccc gccggcagct ttccttgaag agagtatccg aaaagctgcg ccgccttggg
     1441 ccgcacctga gcttcgaaaa tcctcgccga gaccattgcg atggaatctt tgcccaactg
     1501 gcgaagatcg cctttacgaa ggccgcctgt ctgcgacgcg ttaataggcc atcggaagct
     1561 atgctgaaaa catttagagc catcggcgcg gttgccctgc tgctggtcgt caactgtgcc
     1621 agcgtctacg cacccagcca accgccgcat cagctctaca acgaggacga ccttaagctc
     1681 gaaagcggcg aggtcatcaa gaatttctca atctcgtacg ttacgcacgg gacactcaac
     1741 gccaagaagt cgaatgctat cttgatggtc acggagcggc aatcatcatc gtctcgactt
     1801 catgatcgga cgcggcaagg cgctcgaccc ggacaaatat ttcatcatcg cgaccgatgc
     1861 cattgccaac gggccgccca gcaattcgac cgtgcagccg cgcatgtcat tccaaaagtc
     1921 accatccgcg acctggtgga atcgcgatat cgcctgttgg aggaaaaatt cggcatcgac
     1981 cagtcgtcgc ggtcgtctgt ccctcgctgg gcagcatgca ggtgccgcaa atggggtgtc
     2041 agccatcccg atatgatgga cagcctgatt gcgatggtgc cgttggccaa gacgcccgtt
     2101 tgggccgttg cggtgctcga aaccacggtc aaagcgatca tgattgatcc cgcgtggaac
     2161 ggcggcaact acacgtcagt gccggaaaaa ggcgtccggc tgtggctcga tattctcaac
     2221 cttttggcgg cgcgaaccgc cgaccagacg cagttcaagg gcggcatgca cgtcctgccg
     2281 tggatggccc agcaggaaga tgccatgatg aaggccttcg acgccaacaa ttggatctac
     2341 cagacctggg catatgagaa acacgacatc ggcacgacac cgggctttga tggcaacacc
     2401 gcgaaggcac ttggctcgat caag
//
LOCUS       DATILV010000069         1600 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4616944, whole genome shotgun sequence.
ACCESSION   DATILV010000069 DATILV010000000
VERSION     DATILV010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1600
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4616944"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..757)
                     /locus_tag="VLJ17_01590"
     CDS             complement(<1..757)
                     /locus_tag="VLJ17_01590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21702.1"
                     /translation="MAYPSLLSFLSSGLVLMHGSASPKGVIVWVSVIASLTLALAVML
                     VSFVFGLALGSPHVRDDPAGCRARSIAHLAFATPTLYVGFGNVAYYLLQAPAAAPIAW
                     LAFWALVAMIALLGPRSSPIAPAMTPIGHRRLALAHGFSASAILLLFIGPHIVNHAAG
                     FWNGPVHIAIMNVVRRVYRNDIVQPVLLALIGFQILSGTALVRRRMRMPSDFLGTVQT
                     MSAVFVGVYFLAHMTAVFATRHAGTDTNWIWLTS"
     gene            complement(1057..1290)
                     /locus_tag="VLJ17_01595"
     CDS             complement(1057..1290)
                     /locus_tag="VLJ17_01595"
                     /inference="COORDINATES: protein motif:HMM:NF016107.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HSV21703.1"
                     /translation="MDAMPQRIIATGPYRYTRNPMYLGHIIFMAGLVLTFRRGLHSSC
                     LSPADFGFSAGFCRTRLGWNECSLLNIPRIEST"
     gene            complement(1188..>1600)
                     /locus_tag="VLJ17_01600"
     CDS             complement(1188..>1600)
                     /locus_tag="VLJ17_01600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21704.1"
                     /translation="PSGRGDGRGQTSEMALYVSYAQGGVSPMSDMRKPSSVRISRWLQ
                     HTPVHTFVMCPLFVVGFEHALNHGRLTFLPWGAPLLAWGYLQYRLVGNYRLPRAGGPP
                     AWMLCRSGSSRRAHIATRAIRCISATSSSWRDWS"
BASE COUNT          389 a          486 c          460 g          265 t
ORIGIN      
        1 ggctagtcaa ccagatccaa ttcgtgtccg tgcctgcatg gcgggtcgca aacaccgcag
       61 tcatatgggc cagaaaataa acgccgacaa atactgcgct catggtctgc acagtgccca
      121 ggaaatcgct cggcattctc atccgccgcc gcaccagtgc ggtgccgctt agaatctgaa
      181 aaccgatcaa cgccagcaac accggttgga caatgtcgtt gcgataaacg cggcgcacga
      241 cgttcattat tgcgatgtgt actggcccgt tccagaagcc ggccgcatgg ttcacaatgt
      301 gaggcccgat gaacagcagc agtatcgcgc tggcggaaaa accgtgggca agggctaacc
      361 ggcgatgtcc gatgggcgtc atcgcaggtg ctatcggcga tgacctgggg cctagcaggg
      421 ctatcatcgc aaccaacgcc caaaaggcca accaggcaat cggcgccgct gcaggcgctt
      481 gaagcaggta atacgcgaca tttccgaagc ccacatagag tgtgggagtg gcaaacgcca
      541 aatgggcaat gcttcgggca cgacagcccg cgggatcatc ccggacgtgc ggtgatccga
      601 gcgctagtcc aaagacaaag ctgaccagca tcaccgccag cgccagtgtc agggaagcaa
      661 tgacactgac ccaaacaatc acccccttgg gcgaggccga cccgtgcatc aggacaaggc
      721 cagaggacag gaagctcaac agtgacggat aagccaatgc gcagagcgca gggatgagta
      781 gccaaagacg acgaagcgat accgcgctca accctaataa gctatctggg ccggcgtctt
      841 cggacgcgat gattgctgaa agacggagcc tgccaggtcg attcatcgct tccgcctgga
      901 attcaatacg cccttgcgtt tgccgttcag aagatcggcc acgttgcctc ccgcgcactc
      961 tgagttaccg ggtcgcgtcg tgcacatctg tctgaggcac aggcgccacg agagatcacc
     1021 tcgttgcttg tcacgtgacg aacgggatcc atcgcctcac gtggattcga tacgcggaat
     1081 attcagcaag gaacattcgt tccagccgag tctcgtcctg cagaacccgg cgctgaaacc
     1141 aaaatccgcg ggcgataagc aggatgagtg caaaccacga cggaacgtca ggaccagtcc
     1201 cgccatgaag atgatgtggc cgagatacat cggattgcgc gtgtagcgat atgggcccgt
     1261 cgcgatgatc cgctgcggca tagcatccat gccggcggtc cgccggcccg aggtaaccga
     1321 taattcccaa ccagacgata ttgcagatat ccccacgcca gcagcggcgc gccccacggc
     1381 agaaacgtca gccggccatg gttgagcgca tgctcaaagc cgacgacgaa cagcgggcac
     1441 atgacgaacg tatgcacggg cgtgtgctgc agccacctgg aaattcggac gcttgacggc
     1501 ttgcgcatat ccgacatcgg gctcaccccg ccctgagcgt aggaaacata aagggccatc
     1561 tcggaagttt gccctctgcc atccccacgc ccactaggta
//
LOCUS       DATILV010000070         1870 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4105287, whole genome shotgun sequence.
ACCESSION   DATILV010000070 DATILV010000000
VERSION     DATILV010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1870)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1870)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1870
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4105287"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1363)
                     /locus_tag="VLJ17_01605"
     CDS             complement(<1..1363)
                     /locus_tag="VLJ17_01605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012494396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSV21705.1"
                     /translation="MTTVARIESVTQRYGKTSALSDLSLDIPAQCMAGLIGPDGVGKS
                     TLLALISGVRKIQTGKVMVLDGSMVDENHRRASYGRIAYMPQGLGRNLYPILSVFENI
                     DFFGRLFGQGAVERRERIDELLKATGLDPFADRPCGKLSGGMKQKVSLCCSLMHDPDL
                     LVLDEPTTGVDPLSRRQFWELIDSIRARRPLMSVIVATAYMDEASRFDWLAAMDDGKV
                     IANGAPKQILAQAQKPTLDEAFIALLPPEKRAQHQEVILRPLPASKDQTPVIEADGLT
                     RRFGDFVAVDHVSFRIGRGEIFGFLGSNGSGKSTTMKMLTGLLPASEGSAKLFGKPVD
                     ADDMKTRQTVGYMSQAFSLYGELTVRQNLELHAHLYHLPPNEIEPRINELLERYDLKD
                     VADAMPESLPLGIKQRLQLAVAVLHRPPLLILDEPTSGVDPVERDAFWRSLIELSRND
                     GVTI"
     gene            complement(1360..>1870)
                     /locus_tag="VLJ17_01610"
     CDS             complement(1360..>1870)
                     /locus_tag="VLJ17_01610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003599993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HSV21706.1"
                     /translation="QEAAEDSVKAAQADVERLQAVLVDLVLLSPRTGRVEYRLARAGE
                     VVAAGQRVLTILDLKDVYMTIYVPGDVAGKLALGDEVRWILDPVPQYVFPATISFVAT
                     EAQFTPKSVETAEERAKLTFRVKLQADPKVLDQYYQQVKTGIRGLGFVRRDPKVSWPD
                     DLQVKLPPQ"
BASE COUNT          362 a          555 c          578 g          375 t
ORIGIN      
        1 agatcgtgac cccatcgttg cgggagagtt cgattaggga gcgccagaag gcgtcacgtt
       61 cgaccggatc gacgcccgag gtgggctcgt cgagaatgag gaggggcggc cggtgcagca
      121 ccgcaaccgc aagctgcagc cgctgcttga tgccaagcgg caggctctcc ggcatggcat
      181 ctgctacatc cttgagatcg tagcgttcga gtagctcgtt aatccgtggt tcgatctcat
      241 tcggcggcaa gtggtagagg tgcgcatgca gctcgaggtt ctgccggacc gtaagctctc
      301 cgtacagcga aaacgcctgc gacatgtagc cgacggtttg acgcgttttc atgtcgtcgg
      361 cgtccaccgg cttgccgaac aatttagccg agccttcgct tgccggcaga agccccgtca
      421 gcattttcat ggtggtcgac ttgccggagc cgttcgagcc gaggaagcca aaaatctctc
      481 cccggccgat gcgaaagctg acatggtcga cagcaacgaa atcgccgaac cggcgcgtga
      541 gcccgtccgc ctcgatcacc ggtgtctggt ctttgctggc ggggagcggc cgaaggatga
      601 cctcctgatg ctgagcgcgc ttttccggcg gaagcagggc aatgaaggct tcgtcgaggg
      661 tgggcttctg cgcttgggca aggatttgct tgggcgcgcc attcgcgata actttgccat
      721 cgtccatggc ggcgagccaa tcgaaacggc tggcttcgtc catgtaagca gtcgcgacga
      781 tcacgctcat gagtgggcgg cgcgcccgga tcgaatcgat cagctcccag aactgccgcc
      841 gcgagagcgg atcgacgccc gtggtgggct catcgagaac gaggagatca ggatcgtgca
      901 tcagcgaaca gcagaggctg actttttgct tcatgccgcc cgagagcttg ccgcagggtc
      961 gatcggcaaa cgggtccagc cccgtggctt tcaggagctc gtcgatgcgt tcgcgccgct
     1021 cgactgcgcc ctggccgaac aggcgcccga aaaaatcgat gttttcgaaa acgcttagta
     1081 ttggatagag attgcggcca agcccctgcg gcatgtaggc aatgcggccg taactcgccc
     1141 ggcgatggtt ctcatccacc atgcttccat cgagcaccat gactttgccg gtttgaatct
     1201 tgcgcacccc agagatgagg gcgagcaagg tggatttgcc cactccgtcg ggcccaatca
     1261 gccccgccat gcactgcgca ggaatatcga gcgagaggtc actgagtgct gaggtctttc
     1321 cgtagcgttg cgttacgctt tcgatcctgg cgacggtggt cattgtggtg gtagcttaac
     1381 ctgaaggtcg tcaggccatg agaccttggg atccctgcgc acgaagccga gaccgcggat
     1441 gcctgtcttc acctgctgat agtactgatc caatactttg ggatcagcct gaagcttgac
     1501 acggaacgtc agtttcgcac gctcttcggc cgtctcgacg ctctttggcg tgaactgggc
     1561 ctcggttgcc acgaagctga tcgtcgccgg gaacacgtat tgcggaaccg gatcgaggat
     1621 ccaacgcacc tcatcaccta gcgcgagttt gccggcaaca tcaccaggga catagattgt
     1681 catgtacacg tccttgagat cgagaatggt caaaacgcgc tgtcctgcag cgaccacctc
     1741 accggcgcgc gccagccggt actccactcg tccggttcgc ggggatagga ggacgaggtc
     1801 gaccagaacc gcttgcagcc tttcgacgtc agcctgggca gccttgaccg aatcctcagc
     1861 cgcctcctgg
//
LOCUS       DATILV010000071         1507 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2317253, whole genome shotgun sequence.
ACCESSION   DATILV010000071 DATILV010000000
VERSION     DATILV010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2317253"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            267..1211
                     /locus_tag="VLJ17_01615"
     CDS             267..1211
                     /locus_tag="VLJ17_01615"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HSV21707.1"
                     /translation="MTMIKYFVLTAAAALVLTAYVGNALAAGANAANTATKPSRAAPT
                     KDALVTLEKSSYEAWKRKDAQFWDTFLSAKFVGYGSSGKLDKGSATKEYTGADCEIRS
                     YALSHEQMKPLGHDAALITHKTTVDGTCGGQQVPANSWAASVYVRDGAKWKAAFHAEA
                     PVVDPKAASAKPADKKETPINEKGEVKTAASNAAPDALLVAEKDIWEAWRAHDAKKLA
                     DLTTREISFINIFGTFFATKADALKDWTSEGCKVKSVSVTNATGTMLSPTAAILTFDG
                     GADGDCFGQKVGPIWGTSVYVKVGNTWKWTFGINLPAP"
BASE COUNT          362 a          412 c          422 g          311 t
ORIGIN      
        1 gcctagtctc gcggtaagcg gacgttccgc agcagcataa ggctgcgatg tcgcacacag
       61 acccgcaaat gacagaatgt gtgcaaatca tgtgcttaac gcgtgccgcg gcctatcacc
      121 attatcaatt catatacgga tgcgggagtc aacgcccgga taatcactgt tggaccgatt
      181 agcgtgagca taatcaccgt gacgtaaagt accggtaagg catctaacct ttgcgttcaa
      241 atttcagtag tatgagggga taagtcatga ccatgatcaa gtatttcgtt ctaaccgcgg
      301 cggccgctct cgtactcacc gcctacgtcg gcaatgcact ggcggctggt gcaaacgccg
      361 ccaacacggc tacaaagccg tctcgggccg cacctacaaa ggatgcactg gtgacgctcg
      421 agaagagttc atacgaggcc tggaagcgca aagacgcgca attttgggac acatttcttt
      481 cggccaagtt tgtcggctat ggttcatctg gcaagctcga taagggatct gcgaccaagg
      541 aatacactgg cgctgattgc gagatcagga gttacgcgct gtcccacgag cagatgaagc
      601 cgctcggtca tgatgcggcg ctcatcactc ataagacgac cgttgacggc acatgcggcg
      661 gacaacaggt ccctgctaac agttgggcgg cgagcgtata cgttcgcgac ggcgccaagt
      721 ggaaagcagc cttccacgcc gaagctccgg ttgtcgatcc caaagcggcg tctgcaaaac
      781 cggccgacaa gaaagaaacg cctattaatg agaaggggga ggtcaaaacc gccgcttcaa
      841 atgccgcccc cgatgccctg ctcgtcgccg aaaaggacat ctgggaagcc tggagagcac
      901 acgatgccaa aaaacttgcg gacctgacga ccagggaaat ttcatttatc aatatctttg
      961 gcaccttctt cgcaaccaag gccgatgctt taaaggattg gaccagcgaa ggatgcaagg
     1021 tcaagagcgt cagcgttacc aacgctacgg gcacgatgct ctcgccgacg gcggccatcc
     1081 tgacgtttga tggtggtgcc gacggcgact gcttcggcca gaaggttgga ccaatctggg
     1141 gtacgagcgt ctatgtcaag gtcggcaata cgtggaaatg gaccttcggc ataaatttgc
     1201 ctgcaccctg aggctgcgag tgttctacgg agccctgttg aggtcgcagt cgggagacac
     1261 tggcgattcc gcgtcataac agctcggaat agcgcgagtg tttatggttt tatggtaccg
     1321 aaccgttggc atacgcaaga gccgcgccaa ctcgtcgggc cgctcaactc aattgttaag
     1381 cactcacagc ctcgttctcg ttattgacga ggttgcgccg ctcttgcgta tgccaacggt
     1441 tcggtaccat aaacactcgc gctattccga gctgttatga cgcggaatcg ccagtgtctc
     1501 ccgactg
//
LOCUS       DATILV010000072         7753 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_272856, whole genome shotgun sequence.
ACCESSION   DATILV010000072 DATILV010000000
VERSION     DATILV010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7753)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7753
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_272856"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..244
                     /locus_tag="VLJ17_01620"
     CDS             <1..244
                     /locus_tag="VLJ17_01620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21708.1"
                     /translation="GPDLAAEPAWQLAEQLRKAISALEMVNSESIAADHVTASVAVAT
                     GRTSASLDGMHLLTNAITTVRNAEAAGGNRVVAVAV"
     gene            298..1104
                     /locus_tag="VLJ17_01625"
     CDS             298..1104
                     /locus_tag="VLJ17_01625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21709.1"
                     /translation="MRVGMGSKLGCVLVIGMTASPIAARAAAWTLDAGSGNAILTGTA
                     SSSDQIFNASRNTRPTPRYGKFELTGLVEYGATNWFTLMLSPQFQHIDIASPVDAQRT
                     GIGYTEFGGRAKFYDVNSWVFSAQATVRVPGAAPSSNPATIGYTDTQIDVRGLAGRSF
                     TVGTWPAFLDLQVAQRFRNGGAPDEFRADFSFGVRPSENWTLLSQSFNVVSEGAGTWG
                     LPSYDYFKVQLSAVYQMTPAVSLQFGGFTAYTGRNALQENGVVLGAWFKF"
     gene            complement(1105..2109)
                     /locus_tag="VLJ17_01630"
     CDS             complement(1105..2109)
                     /locus_tag="VLJ17_01630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21710.1"
                     /translation="MFLRLAGVLPVVTMLASAGFASADRLDGFNVIGTPDHPFGSASA
                     AIALARAKRVGATAIAIVPFLWQSSPSSFDIVRGADMPDETLRTAIRQARLAGFVVIV
                     KPHVWVPQSWAGAVAPTSESDWRAWFAGYRRSIESIGRIAAQEHADALAIGTELESTA
                     NRAEWFEIVATARAAFSGMLTYFAHNIEEAERIPFWARLDVIGITLYPPLGSDTDRTR
                     RIAKMRAVAEKLDALAAATGKRIVVGEVGLRSAVGAAAKPWESAEERASAPDPLLQAE
                     VLADWISVLDRPAIRGVLVWRWFTDPGAGGPADTDFTVQGKPAEGVLLCAWRLRCGAP
                     "
     gene            complement(2142..3308)
                     /locus_tag="VLJ17_01635"
     CDS             complement(2142..3308)
                     /locus_tag="VLJ17_01635"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0071111 - cyclic-guanylate-specific
                     phosphodiesterase activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing response regulator"
                     /protein_id="HSV21711.1"
                     /translation="MPESFPSIKRLSVGLSKRTPGLIFLDISLEGSDAIDGIRMLAKS
                     KFSGLVQLISGADRELLNDVRHVGEQYSLRMLPPLSKPLDPGTVKEVFGLLRSETDAT
                     ARSEREAPPASAIDLKEALQQSWLEFWYQPKIDLRKKMLVGAEMLARVQHPVHGVLGP
                     NTFMPTADKHSLFRLTEHALHEALRSGIEYDEAGFHLRLSINTPVSALMQLRVPAVVR
                     EYHRGRDNWPGLILEVTQDEVLDDPGLAHEIATQLKLYGVLLSIDDFGHAYSSLARIK
                     ALPVSELKIDPTFASNCAVDQRNAALCQTIVDLAHRFGCLACAEGIETADELRTLQAM
                     GCDCGQGFLFAPPMPKTRLIGALQQRARHARIPRPSTPELSTTNYGPRHRLVSH"
     gene            3705..4340
                     /locus_tag="VLJ17_01640"
     CDS             3705..4340
                     /locus_tag="VLJ17_01640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008192950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV21712.1"
                     /translation="MSLIDISSDEIFIVDDDAAVCDLLAVAFTVDGYRVTPFLDSMSF
                     MASARQRAPACALIDLFMPGKSGLDILRELDARNYPTPIFMMSGGGDIPTAVEAIKSG
                     AFDFLEKRLGTDAMIARVRRAIDSSDSWPNPDAGGGSLSRLFAGWDRLTQRERDVLSQ
                     VISAASSKEAARNLGISRRTVEIHRLHIMQKLGAKNAVDLVRMVLGNGRSA"
     gene            4619..6127
                     /locus_tag="VLJ17_01645"
     CDS             4619..6127
                     /locus_tag="VLJ17_01645"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSV21713.1"
                     /translation="MGPYGLQERLFAAIFESASYQIIGETLDGTITAWNPAAERLFHY
                     TAAEAVGRSIDMIIATDRIAEHQAILAKASRAELIENFETIRLSRDGQRIHVAINVCL
                     AKSDAGEVIGLVEIVRDLTAKRLVEEAFRLAVEACPGGVVMVDGAGRIGLVNGEIERQ
                     FGYSRVELIGQPVDILVPEKLRTQHVLLRENFVGRPEARRMGTGRDLFGRRRDGSEFP
                     VEVGLNPIETRDGPRVLGVIVDISERKRIERLKDEFVSTVSHELRTPLTSISASLGLL
                     TGAADAKLSETAKRLVTIAHSNSQRLVRLINDMLDMEKMESGKVVFNLERIDVRTLIA
                     QAIEANGAVAAEHGVGLRCEEAPPCEVRADSDRLMQVITNLLSNAIKFSPQDAEVVIA
                     VENSGEDVRVTVRDHGPGIPPEFRPRIFGKFAQADGSSARQNGGTGLGLNIVKQIITQ
                     LGGKVGFGDAPGGGAVFYFELPRLSSVAHASREYEERCNDRSDRDLVTHSSH"
     gene            6099..6782
                     /locus_tag="VLJ17_01650"
     CDS             6099..6782
                     /locus_tag="VLJ17_01650"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV21714.1"
                     /translation="MTSLRILHIDDEPDIREVVELSLGLDRAFSVRSCASGSDALATV
                     ADWPPDMILCDVMMPVMDGPATLLRLRECPQTVNTPVVFMTARAQTRELEHFKSLGAA
                     GVISKPFDPMTLADSVRGHLRTAGLAALREGFVRRMRTDAATLAQFRSSLTNGDDAVR
                     ALEQIKAFAHALGGSSGIFGFHEVSEAAVKLEATAIDQLTGSPTSGKIEHDIDALLNC
                     IGNATPSLR"
     gene            complement(6799..7350)
                     /locus_tag="VLJ17_01655"
     CDS             complement(6799..7350)
                     /locus_tag="VLJ17_01655"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV21715.1"
                     /translation="MAASQRRGIPMPEQISVSQLPRLLVVEDDDVERTIICRSGFQSG
                     FEVDAASTLQNAKQLVGERKFDCATIDIGLGADSGLMLLQTLAEQDRLIPVIVISNAD
                     PKMLEMTGKTAEALGFDSHVMSKPLNLIELRDILDDHYRNTPIRRSLDDLSKTAELRR
                     VEQQVGLIVDGWHSPIRDGASGR"
BASE COUNT         1641 a         2184 c         2302 g         1626 t
ORIGIN      
        1 cggtcctgac ctcgccgccg agcctgcctg gcagctcgca gagcaactgc gcaaggccat
       61 ctcggccctc gagatggtca actccgagtc gattgcggcg gatcatgtga cggcgagcgt
      121 ggcagtcgcg accggacgaa ccagcgcttc actcgatggc atgcatctgc tgaccaacgc
      181 aattaccacg gtccgcaatg ccgaagcggc cggcggaaat cgtgtggttg cggtggcggt
      241 ctgatgcgga gcgccgaggc ggtcgtggca tagcgtacag agtgtggcgt gatcgcgatg
      301 cgtgtcggaa tgggatcgaa actcggatgc gtcctggtca tcgggatgac ggcctcgccg
      361 atcgccgcac gggcagcggc ctggacgctc gacgccggta gcgggaatgc gatcctgacc
      421 ggaaccgcga gttcatccga ccaaatcttc aacgcctcac gaaatactcg gccgacgccg
      481 cgctatggca agttcgagct caccggattg gtcgaatatg gcgcgacgaa ctggtttact
      541 cttatgctgt cgccgcagtt tcagcatatc gacatcgctt ctccagttga cgctcagcgg
      601 actggaatag gctacaccga attcggtggc agggcgaagt tctacgacgt gaattcgtgg
      661 gttttttccg ctcaagccac agtgcgggtg cccggcgcgg cccccagctc caatccggcc
      721 acgatcggat atacggatac acagatcgat gtgcgcggtc tggcaggccg cagtttcacc
      781 gtaggcacgt ggccggcatt tcttgatttg caagttgctc agcgatttcg caacggaggc
      841 gctccggacg agtttcgcgc cgatttctcg ttcggggttc ggccgagcga aaattggacg
      901 ctcctttctc aatccttcaa cgtcgtttcc gagggggccg gcacgtgggg gcttccgagc
      961 tacgattatt tcaaggtcca gcttagcgcc gtctatcaga tgacgcctgc agtctccttg
     1021 cagttcggcg ggttcaccgc ctacacgggc cgcaacgcac tccaggagaa tggcgttgtg
     1081 ctgggcgcgt ggttcaaatt ctgatcatgg cgccccgcac cgcagacgcc aggcacacag
     1141 caggacgcct tcggcgggct tgccctgaac ggtgaaatcc gtgtcggcgg gaccgccggc
     1201 acccggatcg gtaaaccagc gccagaccag cacgccgcga atcgccgggc ggtcgagcac
     1261 cgaaatccag tcagcaagga cttccgcctg cagaagcgga tcgggcgcgc ttgcgcgttc
     1321 ctccgcgctc tcccacggct tggcggcggc gccgacggcc gatcgtagac caacttctcc
     1381 gaccacaata cgcttgccgg ttgcggctgc gagggcgtcg agcttttccg caacggcccg
     1441 cattttagca attcgcctgg tgcgatccgt gtcggaaccg agcggcggat agagcgtgat
     1501 gccgatgacg tcaagacgcg cccagaaggg aatccgttcg gcttcttcga tgttgtgcgc
     1561 gaaataagtg agcatgccgg aaaaagccgc ccgcgcagtc gcgacaatct caaaccactc
     1621 cgcccggttg gccgtgctct cgagttcggt gcctatcgcc agcgcatctg cgtgctcttg
     1681 cgcggcgatc cgtccaatac tctcgatcga tcggcggtag cccgcaaacc aagcccgcca
     1741 atcactctcc gaagttgggg cgaccgcccc ggcccagctt tgcgggaccc agacatgggg
     1801 cttcacgatg acgacaaagc ccgccagccg ggcttgccgt atggcggtgc gcagcgtttc
     1861 atctggcatg tcagcgccgc ggacgatgtc gaaactcgac ggactcgact gccacaagaa
     1921 cgggacgatc gcgattgcgg ttgcaccaac tcgttttgcg cgtgccaatg cgattgctgc
     1981 ggacgcactg ccaaacggat ggtccggagt cccgatcacg ttaaatccgt caagacggtc
     2041 agcagacgcg aaacctgcgc tcgcgagcat cgtcacgact ggtagtacgc cggcgaggcg
     2101 gagaaacatt ccggatgggc ggcccattct cgcggctggc ctcagtggga aacgagccga
     2161 tgccgaggtc cataattcgt cgtcgacagc tctggtgtgg agggccgggg gatgcgggcg
     2221 tgacgggcgc gctgttgcaa agccccgata agtcgggttt tcggcatcgg cggtgcaaag
     2281 aggaaaccct gcccgcagtc acaacccatg gcttgcaacg tgcgcagctc gtccgcagtc
     2341 tcaatgcctt cggcacaagc gaggcatcca aatctatggg cgaggtccac gatggtctgg
     2401 cacagggccg cattacgctg atccacagca caattcgacg caaatgtcgg gtcgatcttc
     2461 aattcagaaa ccggcaatgc ctttatccgt gccaatgatg aatatgcgtg accgaaatca
     2521 tcaatcgaca acagcacgcc gtacagcttg agctgagtcg cgatttcgtg agctagcccg
     2581 ggatcatcca atacctcatc ctgtgtcacc tcgaggatga gcccaggcca gttgtcgcgt
     2641 ccacgatgat attcacgcac gacagccggc acgcggagct gcatcagcgc gctgacgggc
     2701 gtgtttatcg aaaggcggag atggaacccc gcttcatcat actcgattcc cgaccgcaga
     2761 gcttcgtgca atgcgtgctc ggtgagtctg aagagactgt gtttgtcggc cgtcggcatg
     2821 aacgtattcg gacccaacac cccgtgaacc gggtgttgaa cccgcgcgag catttcggcg
     2881 cccaccagca ttttctttcg tagatcgatc ttaggctggt accagaactc caaccaagac
     2941 tgctgtaacg cttccttgag atcgatagcg ctggctgggg gagcttcccg ttccgaacgg
     3001 gcggtggcat cggtttccga gcgcagaaga ccgaagacct ctttcaccgt cccgggatcg
     3061 agcggctttg atagcggcgg cagcattcgc aacgaatact gttccccaac gtggcgcaca
     3121 tcgttcagca gctcgcggtc agcgccgctg atgagctgaa cgaggcccga aaatttagat
     3181 ttggcaagca tgcgaatacc gtcgatggca tccgatcctt ccagcgagat atcgagaaaa
     3241 attagtccgg gtgttcgttt cgataagccg accgacaggc gtttgattga gggaaacgat
     3301 tccggcattg cggcacattg agttgcagca tgtgaaagaa attggcaaat ggccggctcg
     3361 tcatcgacga tgaaacaaat tgaaggcgtg gcgttcggat caaaaccaga agatatattc
     3421 accgcagctt tgtccccacg tgaaacaagc ctatgcgact ctttagacat caaccttata
     3481 gtctagctac cgcgtcaacc gccttgcatt caaagtctgg cggagtttga ttaagggcaa
     3541 gtatattttg agcgctgtgg tcctgaggcg gcgcgcggca acacagtgca aggagcaaca
     3601 tggtacagtt ggcggttacg tagaaaatat tcaatcgtta accaaaaatc aaaagatggc
     3661 gtgcatgcct tcgggggagc cgcaacaaag tattaccatt gattatgtcc ttaatcgaca
     3721 tttccagcga cgagatcttc attgtcgacg atgacgcagc tgtatgcgac ttgctcgcag
     3781 tagcgttcac ggtcgacggc tatcgcgtga cgccttttct ggatagtatg tctttcatgg
     3841 cttcggcgcg gcagcgggcg cccgcgtgtg cgctgatcga tctatttatg cccggtaaat
     3901 ccggactaga catcctcagg gaactcgacg cccggaacta ccccacgccg atcttcatga
     3961 tgtccggtgg cggtgacatc ccgactgcag tcgaggcgat aaaaagcggc gcctttgatt
     4021 ttctggaaaa gcggctcggg actgacgcaa tgatcgcacg ggtacgccgg gccattgata
     4081 gctcggactc ttggcccaat ccggacgccg gcggcggatc cctgtcccga ctctttgccg
     4141 gctgggaccg actgacgcag cgcgaacgtg acgtactgag ccaagtcatt tccgccgcct
     4201 ccagcaagga agcggcaaga aatctcggta ttagccgacg cactgtcgag atccatcgct
     4261 tgcatatcat gcagaaatta ggcgccaaga acgcggtgga tctcgttcgc atggtgctgg
     4321 gcaatggacg ctccgcgtga tggcggcgcg cgtgcctatt caatggctgt ttttaaagga
     4381 atttttgttg tggcgaaggt attttaaatt tattatataa atattttccc ctgcggcgat
     4441 tttaaggcaa tattattgtc ttggttgcag catcgcacat cagtggttaa ctttgacggg
     4501 gcctcctcgt gtcaccgatt cctaccccgc agaatcggct caacggcatt catgtgaggg
     4561 gtcgtctttt cggcggagca agctgcggca actagctacc ggcatatcga ggactgatat
     4621 ggggccgtac gggctgcagg aacgcttgtt tgccgccatc tttgagtcgg caagctatca
     4681 gatcattggg gagacgcttg atggcacaat cacggcgtgg aatcccgcag ccgagcggct
     4741 cttccattat acggcagccg aagcggttgg cagaagcatc gatatgatca tcgcgacaga
     4801 ccgtatcgca gaacatcagg cgattctcgc caaagcttcc agagcagaac tgatcgaaaa
     4861 ctttgagacc attcggctga gcagggacgg gcagagaatc catgttgcta tcaacgtttg
     4921 cctggccaaa tccgacgcgg gcgaggtcat cgggctagtg gaaatcgtgc gtgacctcac
     4981 agcaaagagg ttggtggagg aagcatttcg cctcgccgtc gaggcatgtc cgggcggagt
     5041 ggtgatggtt gatggcgccg gcaggattgg gctggtcaac ggcgagatcg agcgccagtt
     5101 tggctatagc cgcgtcgaat tgattggaca gcccgtcgat atcctcgtgc cagaaaaatt
     5161 gcgcacgcaa catgtgctgc ttcgcgaaaa tttcgtcggc aggcccgaag cacgtcggat
     5221 ggggactggc cgcgaccttt tcggtcggcg cagggatggc agcgaatttc cggtcgaggt
     5281 cgggctcaat ccgatagaaa cccgcgatgg accgcgggtg ttgggggtca tcgtcgatat
     5341 tagtgagcgc aagcgcattg agcgcctaaa ggatgaattc gtctcaacgg tcagccacga
     5401 gctacgcacg ccgctgactt ccatttccgc ctcgcttggc cttcttaccg gtgctgcgga
     5461 cgccaagctt tccgaaaccg cgaagcgtct cgtcacaatc gcgcattcga acagccagcg
     5521 gctggttcgc ttgatcaatg acatgttgga catggaaaag atggagtctg gcaaagtcgt
     5581 cttcaatctg gaacgcatcg atgtacgaac attgatcgcg caggcgatcg aggctaatgg
     5641 tgcggtcgcc gcagagcacg gcgtgggcct tcgctgcgag gaagcaccac catgcgaagt
     5701 gcgtgccgat tccgatcggc tcatgcaggt tatcaccaat ctgctctcga atgcgatcaa
     5761 gttctcgccg caagacgcag aggtcgtcat cgcagttgag aactctggtg aagatgttcg
     5821 ggtcaccgtc agggatcacg gaccggggat tccgcccgaa ttcaggcccc ggattttcgg
     5881 caagttcgct caggccgatg gctccagtgc acggcaaaac ggcggcacag gcctcgggct
     5941 caacatcgtg aagcagatca ttacgcaact cggcggcaag gttggcttcg gtgatgcccc
     6001 tggcggaggc gcggtgttct acttcgagct tccgcgtctt agttccgtcg cccatgccag
     6061 tagggaatac gaagagagat gcaacgacag gagcgatcgt gacctcgtta cgcattcttc
     6121 acattgatga cgagccggac atccgcgaag tcgtcgagct ttcgcttggc ctcgatcggg
     6181 ctttttcggt tcgtagttgc gcttccggct ccgacgcgct cgccacagtg gcagactggc
     6241 ctcccgatat gatcctgtgc gacgttatga tgccggtgat ggacggaccg gcgacgctgc
     6301 tgcggctgcg ggagtgtccg caaaccgtca acacgcccgt cgtgttcatg actgcccgcg
     6361 cacaaacacg cgaacttgag catttcaaat cactcggtgc tgccggggtg atctccaaac
     6421 cgttcgatcc gatgacgttg gccgattcgg tgcggggcca tttacgtacg gcggggcttg
     6481 ccgcattgcg agagggcttt gttaggcgaa tgcggacgga tgcggcaacg ctcgctcaat
     6541 tccgatcaag cctgacaaac ggagacgacg ctgtgcgggc gctcgaacag attaaggcct
     6601 ttgcacacgc gcttgggggg tccagcggca ttttcggctt ccacgaggtg agcgaagccg
     6661 ccgtgaagct cgaagccact gcgatcgacc agcttaccgg cagccccaca tcaggaaaga
     6721 tcgagcacga catcgacgcg ctgctcaatt gcatcggcaa cgcaacgcca agcttacgat
     6781 agatgagggc gccgagcgct aacgtccact cgctccatcg cgaatggggc tatgccatcc
     6841 gtcgacaatc aaccctactt gctgttcgac gcgcctgagt tcggcggttt tacttaagtc
     6901 gtccaagctg cgcctaatcg gcgtgttgcg gtaatgatcg tcaagaatgt cgcgaagctc
     6961 gatgaggttt agtggtttgg acatgacatg tgaatcgaag ccaagcgctt cggcggtttt
     7021 ccctgtcatc tccaacattt ttgggtccgc attgctgatc acgatgacgg gaatcaggcg
     7081 gtcttgctcc gcaagggtct gaagcaacat cagcccggaa tcggcgccga gaccgatatc
     7141 gattgtggcg caatcgaact tccgctcacc gacaagctgc ttcgcgtttt gcagcgttga
     7201 cgcggcgtct acttcaaatc cggattgaaa gccgctccgg cagatgatcg tgcgctcgac
     7261 gtcatcgtcc tctactacca gcaatctagg tagttgcgat acgctgattt gttctggcat
     7321 agggatgccc cgcctttgag acgcggccat tgatggtcgc gaacggtttg gaaacgactc
     7381 ggagtgccta tattcacatt taaaaatggc agatccgata atttacctgg taaaactgat
     7441 cgataaagat acctaaaata caaaatactc agtatacatt gtatgcgcga tatgctggcg
     7501 ccagtagacc acgatgcggc gataaatgga tgggtttctt gagctcaaac catggcattt
     7561 gtgatgcaga aaaattcacc gggcggaccg cgccgctcgg tgaatggctt tcatcaaaaa
     7621 gttgatactc agttctcgct gcccaactgg aaatcagggt tcaagccgtt gctcggatag
     7681 gcttgtacct tcacgtcggg ggaatacacc gtgacggcag ccgtatttgg gttggcggaa
     7741 gcatgcgcat cgg
//
LOCUS       DATILV010000073         2270 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2573454, whole genome shotgun sequence.
ACCESSION   DATILV010000073 DATILV010000000
VERSION     DATILV010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2270
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2573454"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            421..1194
                     /locus_tag="VLJ17_01660"
     CDS             421..1194
                     /locus_tag="VLJ17_01660"
                     /EC_number="4.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019964247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HSV21716.1"
                     /translation="MPLQHLVVETKGRVGVIGLNRPQALNALNTALMSELSASLDVFE
                     TDAAIGCVVITGSEKAFAAGADIKEMVGKSYLDAFMGDFAGTWDRVAHARKPVIAAVA
                     GFALGGGCELALQCDLIIAADNAKFGQPEIKLGVIPGIGGTQRLTRAIGKAKAMDLIL
                     TGRTMDAAEAERCGLVARVVPLAELMNEAMKAADTIAAMSLPSVMAAKEAVNRAFEVS
                     LAEGVAFERRMFHALFATEDQKEGMAAFVEKRPARFKNR"
     gene            complement(1201..>2270)
                     /locus_tag="VLJ17_01665"
     CDS             complement(1201..>2270)
                     /locus_tag="VLJ17_01665"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV21717.1"
                     /translation="RRSRNHPEGRLMQNTGTPAIHGGEDVRFHRLDRRQFLRLAGTAS
                     AVAAGANVALSQAYPSRQVRMIVPFSPGGAVDIIGRVIAQKLSDSLGAQFYVENIPAG
                     ATNVANVMTAKSPPDGHTLLFVTSSFVINPSYYRKINYDPIKEFTPIALTAVSPHVLS
                     VNSGVLATNVNELIALVKQNPGKYSYASAGTGQSAQLAAELFKLAYGLDIVHVPFNGG
                     APAMAATVGGHTQIAFNALPTAASFIKDRQVRALAMTGRKRDPAFPDVPTFAEQGVPD
                     QESAFFVGLVAPAGTPSDIVNLLNRELVRVGALPEVTEQLTLMGYTGETGSAGEFAAR
                     IKAEIIQWAKVIRDSKMQQVE"
BASE COUNT          423 a          670 c          720 g          457 t
ORIGIN      
        1 actggtcatg aatccggctt ggaacatcgc ctgcaatacg cgcgacggcg gcacccgcgc
       61 actgccgtgc aatcagccgg tatgggtcta tggcagcccg tgcgaaatcg gtctcggccg
      121 cgggtactac cggaattgcg actgaaattg gaatgatcaa tccacgcacg gggcgtcatg
      181 cacgaccaca gcttgccgcc ccggtagatg ccgatgagtc gattgttgaa gatcttctgc
      241 tcgtaatcta ttgccttgcc ggcttcggct tcttttgagg aatgtcagta attccatcca
      301 atttgtcgtt cgcgcggcaa gccataatgt ttattgtgcg gcgtgccgac ggcccgactg
      361 gctcaacggc accgggccgg atagtgatag cgccgcgcca tgaacctcga agagacatcc
      421 atgcccctcc agcacctcgt cgttgaaaca aagggccggg tcggcgtcat cggcctcaac
      481 cgcccgcagg cgctcaatgc cctcaataca gcactgatgt cggaattgag cgcctccttg
      541 gacgtcttcg agaccgatgc tgcgatcggc tgcgtggtca ttaccggatc cgaaaaagcg
      601 ttcgcggccg gggccgacat caaggagatg gtggggaagt cctacctgga cgcctttatg
      661 ggtgattttg ccggcacgtg ggatcgcgtc gcgcatgcgc gcaagccggt catcgcagcg
      721 gtcgcgggct ttgcgctcgg gggtggctgc gagcttgccc tgcagtgcga tctcattata
      781 gcggccgaca atgcgaaatt cgggcagccg gagatcaagc tcggcgtcat cccgggcatc
      841 ggcggtaccc agcgcctgac ccgcgcgatc ggcaaagcca aggccatgga cctgatcctc
      901 accgggcgca cgatggatgc cgctgaggcg gagcgctgcg gcctggtggc gcgggtcgtg
      961 ccgcttgccg agttaatgaa cgaggccatg aaggcggccg ataccatcgc ggcgatgtcg
     1021 ctgccgtccg ttatggcggc caaggaggcg gtgaatcgcg cgttcgaggt gtcgctcgcc
     1081 gaaggcgttg cgttcgagcg gcgcatgttc cacgctctat ttgccaccga ggatcagaag
     1141 gaaggcatgg cggccttcgt ggagaaacgc ccggcacgtt ttaagaatcg atgagagacg
     1201 tcactccacc tgctgcatct tcgaatccct aatgactttg gcccactgga taatctcggc
     1261 ctttatcctc gcggcgaatt cgcccgcgga gcctgtttcg ccggtgtagc ccatgagggt
     1321 cagttgctcc gtcacttccg gcaaggcgcc gacgcgtacc agttcgcgat tgagaagatt
     1381 gacaatatcc gagggcgtcc cggccggcgc gacgaggccg acgaagaagg cgctttcctg
     1441 atccggcacg ccttgttccg cgaaagtcgg aacatcggga aatgccggat cgcgttttcg
     1501 gcctgtcatg gcgagcgcgc gtacctggcg gtccttgatg aagcttgcgg cagtcggtag
     1561 tgcgttgaag gcgatctggg tgtgtccccc gacggtcgcc gccatcgcgg gggcgccgcc
     1621 gttgaacggc acgtgtacga tgtcgagccc gtaggcgagc ttgaagagtt ccgccgcaag
     1681 ctgtgccgac tgtccggttc cggccgaggc atagctgtat ttgccgggat tttgcttcac
     1741 gagcgcgatc agctcattga cgttggtggc caacacccct gagttcacgc tcaacacgtg
     1801 gggcgaaacc gccgtcaagg caatcggggt gaactccttg atggggtcgt agttgatttt
     1861 tctatagtag cttggattga tcacgaagct tgaagtaacg aacagcagcg tatggccgtc
     1921 cggtggcgat ttcgccgtca tgacattggc cacgttggtg gcaccggccg gaatgttttc
     1981 cacatagaac tgcgcgccga ggctatcgga gagcttctgc gcgatgacgc gcccgatgat
     2041 gtcgactgcg ccgcctggcg agaaaggaac gatcatccgt acctgccgcg acggataggc
     2101 ctgcgataaa gctacgttcg cgcccgccgc aacggccgaa gcggtccccg caagtcgcag
     2161 gaactgacga cgatccagcc gatgaaatct gacatcctcc cccccatgaa tagcgggggt
     2221 tccagtgttc tgcatcaagc ggccctccgg atggttcctg cttcgtcggg
//
LOCUS       DATILV010000074         2592 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2062380, whole genome shotgun sequence.
ACCESSION   DATILV010000074 DATILV010000000
VERSION     DATILV010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2592)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2592)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2592
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2062380"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..216
                     /locus_tag="VLJ17_01670"
     CDS             <1..216
                     /locus_tag="VLJ17_01670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21718.1"
                     /translation="VVRESRHCVIANSLRKELSMEGRNDIHHEGDALDRELNALVREM
                     EQEEVIRRVVIKMLVMLGSDEMLEHDI"
     gene            218..397
                     /locus_tag="VLJ17_01675"
     CDS             218..397
                     /locus_tag="VLJ17_01675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21719.1"
                     /translation="MLEPFAIRWVGENYNAPWPIAPYGLMLLFAGVAYFIFTKALIAH
                     HGASSRLATSIGKSP"
     gene            697..1692
                     /locus_tag="VLJ17_01680"
     CDS             697..1692
                     /locus_tag="VLJ17_01680"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HSV21720.1"
                     /translation="MQFTKFGRTGLIVSRFCLGTATFGRQTDERVSHQILDKAADAGI
                     NFIDTANFYPMAAEPTQLGSTEEITGRWLKGKRDRFIVATKAGAPMGPSPWDQGASRK
                     HLLDAIDASLRRLGTDYVDLYQLHFDDPGTPLDETLEAFDVIVRTGKARYVGVSNILA
                     YRLARAVGRSDVLRVGRFVSVQPRYNLLFREIERELLPLAQEEQLAVIPFNPLAGGLL
                     TGKYRHEQTPDKGRFSVEVGKFREIYQDRYWHKRQFETVEKLGDIAKLRGEPLAKLSI
                     AWVLANPVITSAILGASRLDQLTDTLAAVDLQLDGELKKHLDELTVEYRRGDAIL"
     gene            1933..>2592
                     /locus_tag="VLJ17_01685"
     CDS             1933..>2592
                     /locus_tag="VLJ17_01685"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSV21721.1"
                     /translation="MTDANKQATSHWAVGNVKITRVIELEYVGFPPGFLFDGLTEDRV
                     KSIGWLHPHYADPDGIIRISIHAYVIESQGRRIIVDTCVGDDKPRSIENWNMMKVPFL
                     ERLAEAGFTPDQIDFVLCTHLHLDHIGWNTRWNGKRWVPTFPNARYIFGRLEWDHWSN
                     ENRGKGTMEIPQPLYEDLDIAISDSVLPVVEAGLHDLVETDHRLTEEVSLFPTPGHTP
                     GH"
BASE COUNT          557 a          751 c          734 g          550 t
ORIGIN      
        1 gttgtacgag agtcgcgcca ctgcgttatc gcaaatagct taagaaagga gttgtcaatg
       61 gaaggccgca atgatattca ccacgaaggc gacgcgcttg accgcgagct aaatgccctt
      121 gtccgggaaa tggaacaaga ggaagtcatt cgccgggtgg tcattaagat gctggtgatg
      181 ttggggagcg acgagatgct tgagcacgac atctgagatg cttgagccgt tcgcgatcag
      241 atgggtcggc gagaattaca acgcgccatg gccgatcgcg ccctatggtc tgatgctgct
      301 ctttgcgggc gtcgcctact tcatttttac gaaggcactc atcgcgcatc acggggcctc
      361 ctcgcggctg gcgacctcca tcggaaagtc gccgtgactg gtggtggcct gttcgatccg
      421 tctgcctatt gatgccggta ctggcaatcc cgacccgacc ttctctgccg aagcgtcccg
      481 tcggacactg agttcctctt ctcgtgcggc ggctccacga cttttcctgc atcgtttaga
      541 tgttggccga catccaacat cgtgagcggt tgttacggtg actattcaag aggaactcgg
      601 cgacgggggc gcatgtgcca gcggcccgtt ttcgtgtgct tgctccgccg ggcgcaaacg
      661 gtgggaccgc gcgggttaaa ttctccagga ctatctatgc aattcacgaa gtttggccgc
      721 actggcctga tcgtctcccg tttctgcctc ggtacagcga ccttcggcag gcaaactgac
      781 gaacgcgtgt cgcatcagat ccttgacaag gccgcagacg ccggcatcaa tttcattgac
      841 accgccaact tctatccgat ggccgccgag ccgacgcagc tcgggagcac tgaagagata
      901 accgggcgtt ggttaaaggg caagcgcgac cgcttcattg tcgcaacaaa ggccggggct
      961 cccatgggcc cctcaccgtg ggaccagggc gcatcacgca agcatttgct cgacgcaatc
     1021 gatgcctcgc tgcgccgtct tggcaccgac tatgtagatc tctaccagct ccacttcgat
     1081 gatcccggaa cgcccctcga cgaaacgctg gaagctttcg atgttatcgt ccgcactgga
     1141 aaagcccgct atgtaggcgt ttcgaatatt cttgcgtatc gtctcgcccg agctgtcggc
     1201 cgttcggacg tattgcgtgt cggacgcttc gtctcggtac agccgcgcta caacctgttg
     1261 ttccgcgaga ttgagcgtga gttactgccg cttgcccagg aagaacaatt ggccgtcatt
     1321 ccgttcaatc ctctcgctgg cggcctgttg accggcaaat accggcacga acagacgcca
     1381 gacaagggac gtttctctgt cgaggtcggc aaattccgcg agatatatca ggaccgttac
     1441 tggcacaagc gccaattcga aacggtcgag aaacttggtg atatcgcgaa gctgcgcggc
     1501 gaaccgctgg cgaagctctc gatcgcctgg gtactcgcaa atccggtgat aacctcggcg
     1561 atcctgggcg ccagccgcct cgaccaattg actgacacgt tggcggccgt cgatctccag
     1621 ctcgatggcg aactcaaaaa gcatttggac gagctaacgg tcgagtaccg ccgcggggac
     1681 gcgattcttt aaatcgcgag cgcttcgaca tgtcatcagc gctcgaccgc gagctgaacg
     1741 aggccattgt caacggtgac attggcaata gttacgaaga gttcctggca attcgatcat
     1801 tgccagatcg gcggaccgct gacgtctatt gactttggcc tggacgggcc ccgcgccacc
     1861 ttgccaatac caagccctct cgaggtagcg gccatatcgc cggacagaag cgaccaaacg
     1921 aaggagcgtt tcatgacaga tgcaaacaaa caagcaacca gccactgggc agttggaaat
     1981 gtgaagatca cccgtgtaat cgagttagag tacgttggtt tcccaccggg cttcttgttc
     2041 gacggattga cagaagatcg ggtcaaatcg attggctggc tccacccgca ctatgcggac
     2101 cccgacggca tcattcgaat ttcgattcac gcctacgtca tcgaatccca ggggcggcga
     2161 atcatcgtgg acacatgcgt cggcgacgac aagccgcgta gcattgagaa ctggaacatg
     2221 atgaaggttc cattcctgga gcgcctggcc gaggccggat ttacgccgga ccagattgat
     2281 ttcgtcttgt gtacgcatct ccacctggac cacattggtt ggaatacacg ctggaatggc
     2341 aagagatggg tgccgacctt ccccaatgca cgctatatct tcggccgact tgagtgggat
     2401 cactggagta acgagaaccg cggcaaaggg actatggaga taccgcagcc tctctatgag
     2461 gatctggata tagctatctc tgactccgta ctgcccgtcg tcgaagccgg cctgcacgac
     2521 ctcgtggaaa ccgatcatcg attgacagaa gaagtctcgc ttttcccaac gccgggccac
     2581 acgcccggtc ac
//
LOCUS       DATILV010000075         4909 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1040408, whole genome shotgun sequence.
ACCESSION   DATILV010000075 DATILV010000000
VERSION     DATILV010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4909)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4909)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4909
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1040408"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..815
                     /locus_tag="VLJ17_01690"
     CDS             <1..815
                     /locus_tag="VLJ17_01690"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV21722.1"
                     /translation="NVKAGPNLGRLLINIARTGVVQGGELHDMIRADVSLARGAISRN
                     RDVIIGVKARLSNNVVGNADLEALRRAQEAAAPFDLPVMIHIGQSYSPLRAILPLLKR
                     GDIVTHMYAPPPNGILDDNGRVLPEVLAARRRGIWFDFGNGVADHFNWDVVERAMKQG
                     FAPDTFSTDWNTMSRTTGVVDFPNVMSKFLMFGMPLDQVIARATVNAARVFEAFNDRG
                     TLNLGAPADVAVLELREGSFEFLDNYQGKRTGRQRLLPIATVIGGKRAPPRA"
     gene            1016..1933
                     /gene="bla"
                     /locus_tag="VLJ17_01695"
     CDS             1016..1933
                     /gene="bla"
                     /locus_tag="VLJ17_01695"
                     /EC_number="3.5.2.6"
                     /inference="COORDINATES: protein motif:HMM:NF033105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="subclass B3 metallo-beta-lactamase"
                     /protein_id="HSV21723.1"
                     /translation="MKDSPMRSLRSLAYLLGVLILCPSASLAQAVPPPDHPTVTVKGQ
                     TYTPRSILARNMGTEADRITAFPPHRIVGNIYYVGTNTLSSFLIVTPQGHVLIDSTYE
                     RNVPTIEKSVVQLGFKFSDIKVLLGNHAHGDHQEGDALVKQMTGAQVIAMAEDVPALQ
                     AMKPGGKEHPIDRILHDAETVTLGGTTLVAHLTPGHTPGCTTWTTTAQEGERTYNVMF
                     GCSLRPPAVLTSALVDQFNHAFKTVRALPCDVQLGDHGAQYNMQEKYAKLRDGGPNPF
                     IDPATCTLEADIQEAMFHAILAEQQAARP"
     gene            2074..2541
                     /locus_tag="VLJ17_01700"
     CDS             2074..2541
                     /locus_tag="VLJ17_01700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018391405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 domain-containing protein"
                     /protein_id="HSV21724.1"
                     /translation="MKPLFTIGYEQSTASAFFDALTQARIGLLVDVRAVAASRRPGFS
                     KRQLAAGLDEHGIGYVHLQKLGTPKEGRLAARSGDADTMLRIFERHLATPEAQHELDE
                     LTALAKASLARSGRPLCLLCYERDPAHCHRQRLADALHVRLGLKVEHLFCAPA"
     gene            complement(2763..4205)
                     /locus_tag="VLJ17_01705"
     CDS             complement(2763..4205)
                     /locus_tag="VLJ17_01705"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV21725.1"
                     /translation="MGLGVDQLLLKDYRYPDSPTPGRTHPASAIGLIAAGIVLMLLAV
                     KSKSKFPRFVAMELLSFAVAAIGVIGIAEHVTPAGFAHAWGGSFRIATPNAASFTMLG
                     TGLLMVIWLYHGAGITPKPFWIPALLSLMVLLLDMSTPHGLEAGICYIPIMFYSLWFT
                     APHTPFIFAAIASALTALGRFATQPTNFDFLFEVTNRVMTIGSFWFVAILIYQRRQTE
                     HALRDQKRRNQELDDFAYIAAHDLKEPLRGQLIHAQLLLEDYQDKFDEDGKRRLKRLV
                     QLGQRMQQLVNDLLHFSRLGTSALSVQETDPNAIIADIRLIMEDFLKENCARIIVPHA
                     LPRIACDKAGVTEVFRNLITNAVKYNNKAERLMEIGFLDSVNTSEGGERNVFYVKDNG
                     VGIETEFHEEIFRIFKRLQSVPDRQEAGTGVGLTFAKRIIERHGGRIWLRSEPGQGTT
                     FYFNLNCEIVKPARHVHEQHTVPIPAHSRG"
BASE COUNT         1027 a         1508 c         1432 g          942 t
ORIGIN      
        1 ccaatgtgaa ggcagggccg aacctcggcc gcctgttgat caacatcgcc agaacgggtg
       61 ttgtgcaagg cggcgagctg cacgacatga tccgtgccga cgtgagcttg gcgcgtgggg
      121 cgatctcgcg caaccgcgac gtcatcatag gcgtcaaggc gcgattgtcc aataacgtgg
      181 tcggcaacgc cgatctggag gcgctcaggc gtgctcagga ggctgccgcc cccttcgatt
      241 tgccggtgat gatccacatt ggccagtcct attcgccgct gcgggcgatc ctcccattgc
      301 tcaagcgcgg cgacatcgtc acgcatatgt atgcaccccc gccgaacggc attctcgacg
      361 acaacggccg cgtgctgccg gaggtgctcg ccgcccgccg tcgcggtatc tggtttgact
      421 tcggcaacgg ggtagcagat cacttcaatt gggacgtggt tgagcgcgcg atgaagcagg
      481 gctttgcgcc cgatactttc tccaccgatt ggaacacgat gtcgcggacc accggggtag
      541 tcgattttcc gaacgtgatg tccaagttcc tgatgttcgg catgccgctc gaccaggtga
      601 tcgcacgcgc caccgtcaac gccgcgcggg tattcgaggc gtttaatgac cgcggcacac
      661 tcaatttggg cgcgccggcc gacgtcgccg tgctggagct gcgggaagga tcgttcgaat
      721 tcctcgacaa ctatcagggc aaacgcaccg gccgccagcg gctgctcccg atcgccaccg
      781 tgataggcgg aaaaagggcg ccgccgcggg cgtagcgccg tttccgatgc ggtttaaatc
      841 aactttccgc tgtcatgccc gcgcagagac atcgcgccgc gtcacgcggc gcggactcgt
      901 ctccgcggac atccacgtct tttctgccga gcttcagcaa gccaggcgtg aatggccgga
      961 aacaagccca gacatgaccc tgagaaaatg gctcgctgga acaccggagg gcgcgatgaa
     1021 agattcccct atgagatcac tgagatcact cgcatatctc ctcggcgtgc tcatcctctg
     1081 tccgagcgcg agccttgcgc aggccgtacc cccgcccgac catccgaccg tcaccgtcaa
     1141 ggggcagacc tatacgccgc ggtcgatatt ggcacgcaat atgggcacgg aggccgatcg
     1201 aataactgct ttcccgcccc accggatcgt cggcaacatc tattatgtgg ggaccaatac
     1261 actcagctct ttcctcatcg tgacaccgca aggacatgtg ttgatcgaca gcacgtatga
     1321 gcgcaacgtg ccgacgatcg agaagtcggt cgtgcaactc ggcttcaagt tctccgatat
     1381 caaagtcctg ctcggcaacc acgcccacgg ggaccatcag gaaggtgatg ccctggttaa
     1441 gcagatgacc ggcgcgcagg tgatagctat ggccgaggac gtgccggcgc tgcaggcgat
     1501 gaagcccggc ggcaaggaac atccgatcga ccggatattg catgatgcag agacggtgac
     1561 gctcggcggc acgacgctcg tcgcacatct cacgccgggc cacacccccg gctgcacaac
     1621 ctggaccacg acggcgcagg agggcgagag aacctacaac gtgatgttcg gatgcagctt
     1681 gcgcccgccc gcagtgttga cgtctgcgct ggtcgaccag ttcaaccacg cgtttaagac
     1741 cgtgcgcgcg ctgccctgcg acgtgcagct cggcgaccac ggcgcccaat acaacatgca
     1801 ggagaaatac gcgaagctca gagacggcgg cccgaacccc tttatcgacc ctgcgacctg
     1861 cacgctggag gcggatatcc aggaggccat gttccacgcg atcctggccg agcaacaggc
     1921 ggctcggcca tagagtgcgt tccgcgcgga tcggctatac gccgtcatac cgcgcttgtc
     1981 gtgggcatcc acgctttact tgccgagctt cggcacaacg agccggggta ggactccgga
     2041 taaatggttt gatatccaca tagaacagat ctcgtgaaac ccctattcac catcggatac
     2101 gagcaatcga ccgccagtgc gttttttgat gcgctgacgc aggcgcgtat cgggctactg
     2161 gtcgatgtac gcgctgtggc ggcctcgcgc cggcccgggt tttcgaaacg ccagctcgcg
     2221 gcggggctcg atgagcacgg tatcggctat gtgcatctgc aaaagctagg cactccgaaa
     2281 gaagggaggc tcgctgcgcg cagcggagac gcggatacaa tgttgcgcat cttcgagcgc
     2341 catctcgcga cgcccgaggc gcagcacgag ctcgatgaac tgacagcgct cgccaaagct
     2401 tcgctcgcac gatcgggccg gccgctctgc ctgctgtgct acgagcgcga ccctgcccat
     2461 tgccaccgcc agcggctcgc cgacgcgctt cacgtccgcc tcggcctcaa ggtcgagcac
     2521 ctgttctgcg cgccggcgta gtggggcgta ggatggcttg agtgcagcgt cttgcggtcg
     2581 tcgaggcccg gcatattcag atcgagcaaa accagccccg gcgagtcgtt gcccgctcct
     2641 cggcgcacgc gcgcttcagg ccgtcgagcg cgtcctggcc cgacctgcac caagcgatag
     2701 gacaattcag cccgaccttc ttgaaggcac ggactattgc ctcatagtca tcctcgctgt
     2761 cgtcaaccac gagaatgggc tgggatgggg acggtatgtt gctcatgaac gtgtctcgct
     2821 ggcttcacga tctcgcagtt cagattgaag tagaacgtcg tgccctgtcc cggctcggat
     2881 cgaagccaga ttcggccgcc atggcgctcg atgattcgct tggcaaaggt cagtccgacg
     2941 ccggtgccgg cctcctgccg gtcggggacg ctctgcagtc gcttgaagat gcggaagatt
     3001 tcctcgtgga attcagtttc gataccgacg ccattgtcct tgacgtaaaa tacgtttcgc
     3061 tcaccgccct cactggtgtt gaccgaatcc aaaaatccga tttccatcag gcgttctgcc
     3121 ttgttgttat acttgaccgc attggtaata agattgcgga atacctcggt aactccggcc
     3181 ttgtcgcagg caatgcgtgg caaggcatgg ggcacgatga tgcgcgcgca attctcctta
     3241 agaaaatctt ccattatcag ccgaatatcg gcaatgatcg cgttgggatc ggtctcttgt
     3301 accgaaagcg cggaggtccc tagccgtgaa aaatgcaaca ggtcattgac tagttgctgc
     3361 atgcgctgac cgagttgcac caggcgcttg agacgacgct tgccatcttc gtcgaacttg
     3421 tcctgatagt cctccaacaa gagctgagcg tgaatgagct gtccccgcag cggctccttg
     3481 aggtcatgcg ccgcgatata ggcgaaatcg tccagctcct ggttgcggcg cttctggtct
     3541 cgcaaagcat gctcggtctg gcggcgctga tagatcagta tcgcgacaaa ccaaaatgaa
     3601 cctatcgtca tcacacgatt ggtgacttcg aacaaaaaat caaaattggt gggctgagtg
     3661 gcaaaacggc ccaacgcggt cagtgcgctc gcgatagctg caaaaataaa tggagtatgc
     3721 ggcgcagtaa accacagact gtaaaacatg atcgggatat aacagatgcc cgcctcgagc
     3781 ccgtgtggag ttgacatgtc gagcaacaac accatcaaac tcaagagcgc aggtatccaa
     3841 aagggcttcg gggtgatacc tgcgccgtga tataaccaaa taaccataag caggccggtc
     3901 cccagcatcg tgaagctcgc ggcgttaggc gttgcgatac gaaaggaacc gccccaggcg
     3961 tgagcaaaac cggctggcgt cacatgctcg gctatcccta tcacgccgat cgccgccacc
     4021 gcaaaactga gcaattccat cgcgacaaaa cgcggaaatt tgcttttact cttgacagcc
     4081 aacagcatca gcacgatgcc ggcagctatg aggcctatcg ccgaagctgg atgcgttcga
     4141 cctggagttg gactgtccgg gtaccgatag tccttcagca gcagttgatc gacgccgagg
     4201 cccattccgg cgatgtgttc ggttagggcc ataccgccaa acgccagcgc gaccgccccg
     4261 gccgcaatga cgtaaggtgt ctttctccag acgcatgcta gcaagccgac gccggaagcc
     4321 gcgattgcca atgatgtatt gaatttcatt tcaaacatgc cgggaaacaa aacccccggc
     4381 cattcgctgt ggctgagcca tgcagccgcc gtaacgccac cgatcgcgat cgtgagccat
     4441 gcggcgccca acgcgaccag acgaaactca gttctttggc ggtgtcggtt cggtgacatt
     4501 gtcgccaggc ttctgtgctc cggcatgcag tgaatgttgt cataccgtga tacgcgcaaa
     4561 tcagttatcg gcgcgtaaac tagttgttaa tacgtaggcc tgcgtttacc tgcgcattct
     4621 tcacctctcc ccatcgcgaa aaggtcggta ccgagcgcaa gcgagggcgg gtgcggggcg
     4681 ctcgcacaat gatcgaggcc gagaatccct gatccggatt cctcgctgca cttggaatcc
     4741 gacctctccc gacggcaagc gttaaggcaa ccgctctaaa cggcttgagc cagccacgac
     4801 tggacgaaac ggaattgaac cagtaccacg cttgccgcga tggggcgccg caccattcgg
     4861 gcgtaatcgc gccccgctgg caggtcgcag cccctttttc gccgacgca
//
LOCUS       DATILV010000076         7389 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2573792, whole genome shotgun sequence.
ACCESSION   DATILV010000076 DATILV010000000
VERSION     DATILV010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7389)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7389)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7389
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2573792"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(166..2046)
                     /locus_tag="VLJ17_01710"
     CDS             complement(166..2046)
                     /locus_tag="VLJ17_01710"
                     /inference="COORDINATES: protein motif:HMM:NF014763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HSV21726.1"
                     /translation="MVNTTPARSRQRPRAIRTRLMLIVVTLVIPAWIAVVIAIVNIYR
                     HDRENASQSTIAIARALAAAVDRELAGATATAQVLAASPHLASDDLAAFQREGTAELM
                     SLGFGNNFILSDIGGQQLVNALIPFGQPLSMRADLTTHRKAIETRKPMVSDVFTGNVV
                     ARPLIGIVVPVIRHDEVKYTLGLGLFTEYFSELLVHQQLRPGWHAAIFDSSGATVATH
                     KNRSLVGHRGSPVLLTAMAQAAAGTIETTLDGVPVLLAFSRSEISNWAVAIWIPVAEL
                     SGDFYVHLLASVSGALILLGVGLGLAGFQSTQIARAMHDLIPPALALGQGEVPAIPRL
                     PVHEADNVAQALDRAAELLRNRTVERDRAEREKRIAESVARMKDEFIANVSHELRTPL
                     TSIVGSLGLLNSGSGVQLPAGVVRLISIAHTNAQRLGRLVNDILDIEKMESGKITMNL
                     SPIDLGTAVERAIEANIGFAEKYGVGLRLDPDTQSCVVRADLDRLIQVVTNLLSNAIK
                     FSPRGQKVVVSIKPQGEVARVTVRDHGPGIPLEFKPRLFEKFAQADTADARQNSGSGL
                     GLSIVKEIVTRHGGTVGFEEAPDGGSIFHFEIPLWHGANAAPCDENTDGARAVNWAQG
                     AA"
     gene            2457..3212
                     /locus_tag="VLJ17_01715"
     CDS             2457..3212
                     /locus_tag="VLJ17_01715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV21727.1"
                     /translation="MTAQTILETEGLTKDFAGFLAVTGVNLRVARGTIHALIGPNGAG
                     KTTCFNLLTKFLKPTRGRIVYKGEDITALAPAEVARLGLVRSFQISAVFPHLTVLENV
                     RIALQRKRGGSFDFWRSNRVLDHLNDRAMALITDVGLAAYAGTTAIELSYGRKRALEL
                     AATLALDPEMLLLDEPTSGIGHEDIDRITALIKAVAANRTVLMVEHNLSVVATLSDRI
                     TVLTRGRILAEGNYQDVSANPEVREAYMGVGHD"
     gene            3205..3909
                     /locus_tag="VLJ17_01720"
     CDS             3205..3909
                     /locus_tag="VLJ17_01720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012707179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV21728.1"
                     /translation="MTSPLLSVNALQAWYGESHVLHGVSFDVNAGEVVTLLGRNGAGK
                     TTTLKSIMGMVGKCTGSVKFGGRELVGLSSNAIARAGIAICPEERGIFASLDVEENLE
                     LPPAVHPGGLTRERIFELFPNLKERLRSQGTKLSGGEQQMLAIGRILRTGARMLLLDE
                     PTEGLAPVIIQQIGRTIRALKEQGFTIVLVEQNFHFAATVADHYYVMERGRVAERFAQ
                     PELDANRNKLHEYLGV"
     gene            4094..5305
                     /locus_tag="VLJ17_01725"
     CDS             4094..5305
                     /locus_tag="VLJ17_01725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV21729.1"
                     /translation="MKMTRNMIVTAALLASSSAFAQNTDGVVKIGVLSDMSSLYSDIG
                     GAGSVAAAKLAVEDFGAAAKGMKVEIVSGDHQNKPDIGSNIAGTWFDVDKVDVIVDVP
                     NSGVALAVSEIARQKNKLFLVSGAAASDLTGPKCNANTIHWTYDTWALANGTGKAVVK
                     TGGDSWFFITADYAFGHALERDTAAVVEANGGKVVGKVRVPLNNNDFSSFLLQAQASK
                     AKVIGLANAGGDTINSIKQASEFGIVRGGQSLAGLLVFATDVAALGLPTAQGLIMTEA
                     WYWDMNDANRTWTKRWQVERPGKYPSMVQAGVYSAVLHYLKAVEALKSDADGKAVVAK
                     MKEMPTDDRLFGKGTIRPDGRKIHDLYLFEVKKPAESKYPGDFYKTRATIPAAEAFRP
                     LKEGGCPLVQG"
     gene            6198..7175
                     /locus_tag="VLJ17_01730"
     CDS             6198..7175
                     /locus_tag="VLJ17_01730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV21730.1"
                     /translation="MRLPRRRFLGLAASAPALPAVSRLARAQTYPVRPVRLVVGVPPG
                     GTFDIVARLIGQWLSERFGQQFIIENRPGAGTNIGTDVVAHAPADGYTLLLAGSPAAI
                     NATLYDNLNFNFIRDIAPVASIERMPLVMAVNPALPLKTVPEFINYAKANPGKINMGS
                     GGIGSTGYVSGVLFTMMAGIKIAQVPYRGEAPALTDLIGAQVQVVFATAGSVIQHVRS
                     GALRALAITTSVPLDALPGVPSLADFLPGYEATAWIGIGAPINTPAEIVTRLNHAINA
                     ALADPQIKAQLADLGASILAGSPADFGKFIADETEKWGKVVKFSGAKPE"
BASE COUNT         1445 a         2234 c         2243 g         1467 t
ORIGIN      
        1 gctgtcgatt actcaaactc aacgcaagtc ttgcctgatc ggggagcgct cttgcccgag
       61 cccgcaatcc ataaccaccg gccgaggtca tggattgcgg aaccgctact tgacggtgac
      121 gcgccggaat gaccgagaca aagcgttagg acgccagtcg gcccgctaag ccgcgccctg
      181 cgcccaattg acggctcgtg cgccgtctgt gttttcgtcg cagggcgctg cgttcgcacc
      241 atgccaaagc ggaatttcaa agtgaaagat tgagccaccg tccggcgcct cctcaaatcc
      301 gacggtgcca ccgtgtcggg taacaatctc tttgacaata ctaagcccaa gacccgaccc
      361 gctgttctgc cgtgcgtctg cggtatcggc ctgcgcgaac ttttcgaaaa gacggggctt
      421 gaattcgagc ggaatgccgg ggccatgatc gcgcacagtg acgcgggcga cctccccttg
      481 cggcttgatc gagacaacga ctttctggcc gcgcggcgag aacttgattg cattcgacaa
      541 caagttggta acaacctgga tcagccgatc gaggtctgcg cgcactacgc aggactgcgt
      601 atccggatcg agcctgagac cgacaccgta tttctccgcg aagccgatat tggcttcgat
      661 cgcccgctcg actgccgtgc ccaggtcaat tggtgagagg ttcatcgtta tcttgccgga
      721 ctccattttc tcgatgtcca gaatgtcgtt gacgaggcgc cccaatcgtt gcgcgttggt
      781 atgggcgatc gagatgaggc ggacaacgcc ggccggcaat tggacgccag agccgctatt
      841 cagcagcccg agagagccga caatcgaggt cagcggcgta cgaagctcgt ggctcacgtt
      901 cgcgatgaat tcgtctttca tgcgcgcaac agattcggct atccgtttct ctcgttcggc
      961 gcgatcgcgt tcgacggttc ggttccgcag gagttcggca gcccgatcca gcgcttgcgc
     1021 cacgttgtcg gcctcgtgga cgggaagccg cggaatggcc ggcacctcgc cttgcccgag
     1081 cgcgagggcg ggcgggatca agtcgtgcat ggcgcgtgcg atctgggtcg attggaagcc
     1141 ggccaatccc agcccgacgc caaggagaat taatgcgccc gagacgctgg ccaggagatg
     1201 cacgtagaag tcacccgata gctctgcaac cggtatccag atcgcgacgg cccaattcga
     1261 aatctccgag cggctgaacg ccagcaaaac cggaacgcca tcgagcgtcg tttcgatggt
     1321 gccggcggcc gcctgcgcca tcgcggtcaa taggaccggc gacccgcgat gtccgaccaa
     1381 acttcggttt ttatgggtcg caaccgtcgc gcccgaggaa tcaaaaatgg ctgcgtgcca
     1441 acccggccgc agctgttgat ggaccagtaa ttcactgaag tattcggtaa acaggccgag
     1501 ccccagcgtg tacttgactt cgtcgtggcg aatcaccgga accacgatac cgatcagcgg
     1561 cctggcaacg acgtttcctg tgaagacgtc ggacaccatg ggcttgcgcg tctcaatcgc
     1621 cttacggtgg gtcgtcagat ctgctctcat cgacagcggc tgaccaaagg gaattaacgc
     1681 attgacgagt tgttggccac ctatgtcgga gagtatgaag ttgttcccaa acccaagact
     1741 cataagttcg gctgtgccct cgcgttgaaa tgcggcgaga tcgtccgacg cgaggtgcgg
     1801 cgatgccgca aggacctgag cggtcgcggt tgcgccggcc aactcgcgat caaccgcagc
     1861 cgcgagcgct cgtgcgatcg cgatcgtgct ttgcgaagcg ttctcgcggt catgccggta
     1921 gatgttgaca atggcgatca ccacggcgat ccaggccggg atgaccaagg tgacaacaat
     1981 cagcataagc cgcgtgcgga tcgcgcgtgg gcgctggcgc gatcgagccg gggtagtatt
     2041 caccatgctg cgtccatgtg tggtgctctg ggccggagga accctttgac cacgcgtcaa
     2101 atagacgctc ggttaccggc tttctcgacc aaaaccaacg tgatgaggtg tccgccgcct
     2161 ccaattgcgc gttaccttac cccgcgacgt attgcaaatt cgtaagagat agccggcggt
     2221 gcgtaaacaa aatgcgaatt tgcgcatgcg gggcctgaca ggaaatgtta atgtttgctc
     2281 cgaggagacg gagctagctt tcggcagcgg gtttcatctc gacaagcggg tgccaggcgg
     2341 catcaaattg ggggtgtgat gaaacgtcct ttcaccttcg cgcttgcggc tgtcgccgga
     2401 aaagcgttcg acgaaagcgc ccaggtggcg cggctcaggc tgccgcagcc aggttgatga
     2461 ccgcgcagac gatccttgag accgagggtc tcaccaagga cttcgctggg tttttggctg
     2521 tgacgggcgt aaacctgcgt gtcgcgcgcg gcaccatcca tgcactgatc ggtccgaacg
     2581 gtgccggcaa gaccacttgc ttcaatctgc tcaccaagtt tctcaagccc acccgcggtc
     2641 gcatcgtcta caaaggcgaa gacatcacgg cgctggcgcc ggccgaggtg gcgcggctcg
     2701 ggctggtgcg ctcgttccag atctcggcgg tatttccgca tctcaccgtg ctggagaacg
     2761 tccgcatcgc gctgcagcgc aagcgcggcg gctcgttcga tttctggcgg tcgaaccggg
     2821 tgctggatca ccttaacgat cgcgccatgg ctttgatcac cgatgttggc ctggccgcct
     2881 atgcgggcac gactgcgatc gaactatcct atggccgcaa gcgggcgctg gaacttgccg
     2941 ccactctggc gctcgatccc gaaatgctgc tgctcgatga gccaacctcc ggcatcgggc
     3001 acgaggacat cgatcgcatt acggcattga tcaaggcggt cgcggcgaat cggaccgttc
     3061 ttatggtgga gcacaatttg agcgtggttg cgacgctgtc cgaccggatc accgtgttga
     3121 cgcgcggccg cattctcgct gaaggcaatt accaggacgt ctccgccaac ccggaggtgc
     3181 gcgaggccta catgggagtg gggcatgact agtccgctcc tctccgtcaa cgcactgcag
     3241 gcttggtacg gcgagtcgca cgtgctgcac ggcgtgagct tcgacgtcaa tgccggcgag
     3301 gtggtcacgc tgctcggtcg caacggcgcc ggcaagacta cgacgctcaa gtccatcatg
     3361 gggatggtag gtaaatgcac cggatcggtg aaatttggtg gtcgcgaact cgtcggcctt
     3421 tcgtcgaacg ccatcgcccg cgctggcatt gcgatctgcc cggaagagcg cggcatcttc
     3481 gctagtctcg atgttgagga aaacctggag ttgccgccag cggtgcaccc gggtggtctc
     3541 acgcgcgaac gcattttcga attgtttccg aacctcaagg agcggctgcg cagccagggc
     3601 accaagctat ccggcggcga acagcagatg ctggcaatcg gtcgcatcct gcgcaccggg
     3661 gcgcgcatgc tattgcttga cgagccgacc gaggggttgg cgccggtgat cattcagcag
     3721 atcggccgga ccattagagc cctcaaggag caggggttta ccatcgtttt ggtcgagcag
     3781 aattttcatt tcgccgcgac tgtggcggat cactactatg ttatggagcg tggccgtgtg
     3841 gccgaacgct ttgctcaacc cgaattagac gccaatcgga acaagctgca cgaatatctc
     3901 ggcgtttaga acggtttccc atatggtcgg atcgacttgt caccatcatg cctccacttg
     3961 tcgcgggcat ccacgccttt cttgcggcgt tccggcgaac tgggcatgga tggccgggac
     4021 aagcctggac aagcccggcc gtgactccgg aaagaagcag cttcgggccg caggcccgac
     4081 atggaggacg aggatgaaaa tgacacgcaa catgatcgtg acggcggcgt tgctcgcaag
     4141 cagttccgcc tttgcgcaaa ataccgatgg cgtcgtcaag atcggtgtct tgagcgacat
     4201 gtcgagtctc tactctgaca tcggcggcgc cggctcggtg gcggccgcga agctcgcggt
     4261 cgaggatttc ggagcggccg ccaagggcat gaaggtcgag atcgtcagcg gtgatcatca
     4321 aaacaagcct gacatcggct cgaatatcgc cggcacctgg ttcgatgtcg acaaggttga
     4381 tgtaattgtc gacgtgccga attcgggtgt tgcactcgcg gtgagcgaga tcgctcgcca
     4441 gaagaacaag ctgttcctgg tgtcgggcgc cgcggcgtcc gacctcaccg gtccgaaatg
     4501 caacgccaat acaatccatt ggacctacga cacctgggca ctcgccaacg gtaccggcaa
     4561 ggcggtggtc aagacgggcg gggacagttg gttcttcatt actgccgact acgccttcgg
     4621 gcatgcgctc gaacgcgaca ccgccgcggt cgtcgaagcc aatgggggca aagtcgttgg
     4681 caaggtccgc gtcccactta acaacaacga cttttcctca ttcctgctgc aggctcaggc
     4741 gtccaaggcc aaggtgatcg gtctcgccaa tgccggcggc gataccatca attcgatcaa
     4801 gcaggcttcc gagttcggca tcgtcagagg cggccagagt ctcgccggac tcctggtgtt
     4861 cgcaaccgac gtggcggcgc tgggcctgcc gactgctcaa ggtctcatca tgacggaggc
     4921 gtggtattgg gacatgaacg acgccaaccg gacctggacc aagcgctggc aggttgagcg
     4981 acccggcaag tacccctcca tggtgcaggc tggggtctat tcggcggtgc tgcattatct
     5041 caaagccgtc gaggcgctca aatccgacgc cgacggcaaa gcggtcgtcg cgaagatgaa
     5101 ggagatgccg accgacgacc gcctgttcgg caagggcacg atccgtcccg acggccgcaa
     5161 gattcacgac ctctatctgt ttgaagttaa gaagcccgcc gagtccaagt atccgggcga
     5221 cttctacaag actcgcgcca cgatcccggc cgcggaggcc ttccggccac tcaaagaagg
     5281 cggctgcccc ctggtccaag ggtgaacttt cttctttgct cttccctctt ctttcctccc
     5341 cgttgggcag ggcaatcgca tttggccgcc gcggccttca cctctccccg cttgcgggga
     5401 gagtcgcgct tgcgcgatcc ggatgagggg cctctccgca agtctgagct tatggggagg
     5461 cttaagcttt tcgacagaac cccgcccctc tccatagtcc gtcgaagacg ggtgtaaacg
     5521 ccctgatggc aacagggaga gggagtagag gcgcgtgctg gccataccca ttgcgctcgg
     5581 ttcgttgcag ggggagttac ttatcggacc tgctgcgact aataagggga tatattaatt
     5641 ctgccgtccg tcacgaattg ttaacctaaa atccgtgcag ctcccgtctc cggggcccaa
     5701 tccaatcacc cggtccagtg atcgtattta aaacgctgcg actttctttg acgttggcct
     5761 tgacataagc cactcaaagt atgagtcgat cctagtctct tccgctaccg tggtgagctt
     5821 tccgcaatcg agacaccggt aggtgctaag catcggacgt ccacctgcgc cgataacttt
     5881 catcgtaccc ctacaaaatg gacacatgcg agaccccgtc attgcacgcg cggtcgctgg
     5941 ccgtcccgta tggtggctac actccaccct gttgcgcggg cggcaactgc ggccgtcaag
     6001 gtcaatatcg gggggaaagt aatttcggac aaggccctga agggcaatac caaagtgcaa
     6061 tatgcacgtg ccacaaggac agctgaccgt cgtggttacg ttttggctgc attggccgat
     6121 atgcgaaatt gatttgttgt gtgttaacgg gcactctctg cctttaacgg gggtacccca
     6181 acggcctagg aggcaccatg aggcttcccc gtcgtcgatt cttgggcttg gccgccagcg
     6241 ccccggcgtt gccagccgtt tcgcgcctcg cgcgggctca aacctatccg gtgcggccgg
     6301 tgcgcctcgt cgttggcgtt cctccaggtg gcacgttcga catcgtggca cgtctgatcg
     6361 gccaatggct gtcggagcgg tttggacagc aatttatcat cgagaaccgg cccggcgccg
     6421 gcaccaatat cggcaccgac gtggtcgccc atgcgcccgc cgacggctat acgcttcttc
     6481 ttgccggctc gccggcggcc atcaacgcga cgctctatga taaccttaat ttcaacttca
     6541 tacgcgatat cgcgccggtc gcgagcatcg aacgcatgcc cctggtcatg gcagtcaatc
     6601 ccgcgctgcc tctcaagacc gttccagagt tcatcaacta tgccaaggcc aatcccggca
     6661 agatcaacat gggctcgggc ggtatcggct cgaccggtta cgtttccggc gtgctgttca
     6721 ccatgatggc gggcatcaag atcgctcagg tgccatatcg cggagaggcg ccggcgctga
     6781 ccgacctcat cggcgcgcag gtgcaggtcg tattcgcgac cgcaggctcg gtaatccagc
     6841 atgtcaggtc cggcgcattg cgggcgcttg ccatcactac cagcgtgccg ttggatgctt
     6901 tgcccggcgt gccgtcgctc gcggactttc tccccggtta cgaagcgacc gcgtggatcg
     6961 gcattggtgc gcccatcaat acgcccgccg agatcgttac caggctcaac cacgcgatca
     7021 acgcggcgct tgcggatccc caaatcaagg cacaactcgc agacctcggc gcctctatcc
     7081 tcgcaggctc gcctgccgat ttcggcaagt tcatcgccga cgaaaccgag aagtggggca
     7141 aggtggttaa attctcgggt gccaagccgg agtaattcgc tctcagatcc gagcgcaggg
     7201 acgagacggt ggcgaccctc agagcggggg catatcatct tctcgcgctc ggacttccga
     7261 tgggacaaga agcgcggcgt ctatgtatcc ccgacggcaa gctactacgc accaggtgct
     7321 tggcggccgc acacagctct atcgtgcatt gaagcgggac gagcgatcac tgcgtgggag
     7381 cacggtcgc
//
LOCUS       DATILV010000077         2841 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2318373, whole genome shotgun sequence.
ACCESSION   DATILV010000077 DATILV010000000
VERSION     DATILV010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2841)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2841)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2841
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2318373"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            93..2144
                     /locus_tag="VLJ17_01735"
     CDS             93..2144
                     /locus_tag="VLJ17_01735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012030538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HSV21731.1"
                     /translation="MRIGIRLAITSLVLASIIVSAIGVHLLWWRTAEGNSQALAATIN
                     EQIVSAVGKELETITTQARAAHTAIRTLFVQNVLETREADKREFVFLSQLQAQPGISW
                     VAFGWPDGAFFSAHKLGDLGLEMMEIARTDGVLKRRIDQYQVVVGDIQFEKRRFENTD
                     YLVTDQQWYREGIKNDEPSWFEVTAYPVGLRPSIAYAGPIDVYQKRQGVLAVIIENTR
                     LAQFLSQLSVGKSGAAFILRRGGAVIAAPDPDADETNMQRSDQPLLPIAQAAIKQADV
                     ADGNDKSARQVRLVAAGNAYAVTLTPLAFPGWTLATVIPEAEFLGPVETTIRHLLVGL
                     AVLVAAAAVLSAWLARRLLAKPLITVMEEVKHVERFELGQVRRHPSRVTELANLSNAI
                     ADMAGGLAAFRKYIPADLVRMLVREGVEPRPGGSVRTLTVMFADIAGFTGLSERLGDQ
                     IIPLLSKYLDIMSREVNSHGGTIDKFIGDAVMAFWGAPVTNADHAVDACRAALACQHS
                     LRASGPTDDGGRPLKVRIGINSGNMLVGNIGSEFRLNYTVIGDAVNVASRLESANKEY
                     GTDIIIGEEARRLAGDRICVRELDRLMVYGRSGGLAIYELLDVDDAATVLPRWVTLYE
                     RALAAYRSQDFAGAMLLFRQVLAEREADQPARLMLARCSEFLSSPPGQDWQATNAMKV
                     K"
     gene            2416..2649
                     /locus_tag="VLJ17_01740"
     CDS             2416..2649
                     /locus_tag="VLJ17_01740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012589353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2282 domain-containing protein"
                     /protein_id="HSV21732.1"
                     /translation="MLTAPAAAGPKPPQPTMDKCFGIALKGDNDCAAGPGTTCAGTAA
                     ADYQGNAWKYVPKGTCETIKTPKGMGSLQPIKS"
BASE COUNT          583 a          830 c          859 g          569 t
ORIGIN      
        1 ttgaggaggt ctggaacgtg acgcgtccgt gaatgctgga agcccatctt atgaggcgcg
       61 ccggcggtag aacgccgagc cgaagaagcc aaatgcgaat tggaattcgc ctcgccatta
      121 ccagtctcgt gctcgcctcc atcatcgtca gcgctatcgg cgtccatctg ctgtggtggc
      181 ggacggcaga gggaaatagt caagccctcg cggcgaccat caacgagcag atcgtctcgg
      241 ccgtaggaaa agagcttgag accatcacga cgcaagcgcg cgccgcgcac actgccattc
      301 gaaccttatt cgttcaaaat gtgctagaga cacgcgaggc agacaagcgg gagtttgtct
      361 ttctctctca gctgcaggcg caaccgggca tatcctgggt ggcgttcggt tggcccgacg
      421 gcgccttttt ctccgcccat aaactaggcg atctcggcct cgaaatgatg gaaatcgcgc
      481 ggaccgacgg cgttctcaaa cgccgcatcg atcagtatca ggtggttgtc ggagatatcc
      541 aattcgagaa acgccggttc gaaaataccg attacttggt caccgatcag caatggtatc
      601 gcgaagggat aaaaaacgac gagccgagct ggtttgaagt cactgcatat ccagtcggat
      661 tgcgcccgtc catcgcttac gccggcccaa ttgacgtgta ccaaaaacgc cagggagttc
      721 tggcagtcat catcgaaaat acgcggctgg cgcaattcct ctcgcaattg tcggtaggaa
      781 agtcgggtgc agcctttatc ctccgccgtg gcggagccgt aatcgccgcg cccgatccgg
      841 atgccgatga aacaaatatg cagcgatcgg atcagcctct gctaccgatc gcgcaagcgg
      901 ctatcaagca ggcggatgtc gcggacggga atgataaaag cgcgcgtcag gtacggctgg
      961 tcgccgccgg aaatgcctat gcggtcacgc taaccccgct cgcctttcca ggatggacgc
     1021 tggcgaccgt gatcccggag gccgaatttc tcggcccggt tgaaacgacg atccgccatt
     1081 tgctcgttgg cctggcagtt cttgtggcgg ctgcggctgt tctatcggcc tggctcgcgc
     1141 ggcgcctgct ggccaagccg ctaataacgg tcatggagga agtcaaacac gtcgagcgat
     1201 tcgaactcgg ccaagtgcga cgccatccct cgcgcgtcac tgaactcgcc aatctatcca
     1261 acgccatagc cgacatggcc ggcggtttgg cggcttttcg aaaatatata ccggcggatc
     1321 tcgtgaggat gctggtgcgc gagggcgtcg agccgcggcc ggggggctcg gtgcgaacgc
     1381 tgacggtgat gttcgcggac attgccggct ttaccggatt gtccgaacgg cttggcgatc
     1441 agatcattcc gctgctctcc aagtatctcg atattatgtc gcgcgaggtc aacagccacg
     1501 gcggcacaat cgacaaattc attggcgacg cggtcatggc gttttggggc gctccggtaa
     1561 cgaacgccga ccacgccgtc gatgcctgcc gcgctgcgct cgcctgccag cattcgctgc
     1621 gggcctcggg accgaccgat gacggcggcc ggccgctgaa agtccgtatc gggatcaatt
     1681 ccggcaacat gctggtcggc aatatcggtt cggaattccg gctcaactac accgtgatcg
     1741 gcgatgcggt gaatgtggca agccgcttgg aaagcgccaa taaagaatat ggcaccgata
     1801 tcatcatcgg cgaggaagcg cgtcggctcg ctggtgatcg gatctgcgtg cgcgaactgg
     1861 accgactgat ggtctacggc cgctcaggtg ggctagcaat ttacgaattg ctggacgtcg
     1921 acgacgcggc cacggtgctg ccgcgctggg ttacgcttta tgagcgtgcc ctggccgcct
     1981 atcgctcgca ggatttcgcc ggcgccatgc tgctctttcg gcaggttttg gcagagcgcg
     2041 aagcggatca gccggcgcgc ctcatgctag cgcggtgcag tgaatttctc agttcgccgc
     2101 cgggacaaga ttggcaagca acaaatgcaa tgaaggtgaa gtagcggatc agcttttatg
     2161 gtatgcaacg gtccgtggct tgcgcattca tcgtgcgtgc attgaaacac ctttatatgg
     2221 accgccgatt gccatcacag ggttgtgacg cgattgtcat caaacatgat ggcgggatgc
     2281 gctccaggcc ctgctatgaa atgcgcgcag caagtgcctc gcaacgccag tttctctgga
     2341 gaggagaatc ccatggggtc tagaaacatc gtcagcactg ctaccatcgt cggttccttc
     2401 gccgccgcgt tgaccatgct cactgcgccg gcagctgccg ggccgaagcc cccgcagccc
     2461 acaatggaca aatgcttcgg cattgcgctg aagggcgaca acgattgcgc cgccggcccc
     2521 ggcaccacct gcgcagggac tgcggccgcc gactatcagg gcaatgcctg gaagtatgtt
     2581 ccgaagggaa cgtgcgagac gatcaagacg ccaaaaggca tgggctcgct tcaaccgatc
     2641 aagtcttgat tttgtaaggg aggggcaccg cacctgcgcg cctctcattg gtcgctccca
     2701 gctactttat tagatgctga acgtacgcaa ggcctcgaaa cttccggcgc gtgctggcgt
     2761 cagcttcaag ccggtgcatt ttcgcgccat tctcgtcgag ccgcagccaa tcggcttctt
     2821 cgaggtgcac gcggagaatt a
//
LOCUS       DATILV010000078         3691 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2318795, whole genome shotgun sequence.
ACCESSION   DATILV010000078 DATILV010000000
VERSION     DATILV010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3691
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2318795"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..484)
                     /locus_tag="VLJ17_01745"
     CDS             complement(<1..484)
                     /locus_tag="VLJ17_01745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008967963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSV21733.1"
                     /translation="MASAEGQFTGRRVDRIELSILIPCLNEAETIERCIEKAKAFIAR
                     ADINGEVVIADNGSTDGSIALATTTGARVVQVVERGYGAALRAGIFAARGRYVIIGDG
                     DDSYDFLNLDPFVAKLRDGFDLVIGNRFRGGIEPGAMPFLHRYLGNPVLSLIGRTFFD
                     A"
     gene            complement(513..1379)
                     /locus_tag="VLJ17_01750"
     CDS             complement(513..1379)
                     /locus_tag="VLJ17_01750"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family A protein"
                     /protein_id="HSV21734.1"
                     /translation="MAASISVIIPAYNRAAVIGAAIDSVVNQALPSPECTLDIIVVDD
                     ASDDDLAATLRPFKQRIRLIRHDRNGGAAAARNTAIAVADSDLLAFLDSDDIWLPGKL
                     ARQMAAMHQNGWEASCTAYLLSRPGTRDHISPRLSTGLIGLEQMAWGCFVSPGSTLLC
                     RRSLFEEIGRFDTGLRRLEDWDWLLRYASVRSFGFLAEPLARIAPSFGGRADKVIPAL
                     DRMWRKHASGFAPQTQRHFAAALDIERAAAYHRSGNRAAAAKSLSRSLLRVPFGNRAF
                     AAILHNRLARTA"
     gene            complement(1518..2801)
                     /locus_tag="VLJ17_01755"
     CDS             complement(1518..2801)
                     /locus_tag="VLJ17_01755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003979 - UDP-glucose 6-dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HSV21735.1"
                     /translation="MKHNRRIAVIGLGYVGLPVAVSFARSAARVIGFDIDPSRIAELR
                     SGHDRTREVDCRDLQQISLEFTTDAKLLHEANFYIVTVPTPIDDAFRPDLNAMLSASR
                     TVGTALKRGDIVVYESTVYPGAVEEECVPVLEEVTGLTAGLDFTVGYSPERINPGDRT
                     HRFETIKKVVASQDKKTLDIIADVYGSVVRAGVHRAPSIKVAEAAKVIENTQRDLNIA
                     LMNELSAICQALGIDTGDVLETAKTKWNFLPFVPGLVGGHCIGVDPYYLTHRAERAGY
                     HPEIILAGRRINDGVGPRIARECVRLLLRAGASDATVTVLGLTFKEDVPDIRNSKVVD
                     IVDELKSFGIDVQVHDPLALPGDAEREYQINLLSKDALRPADAVIFAVAHEAFVRDGW
                     PLVTGLLKQGMGVVLDVRGRLDRAARPPGVELWRL"
     gene            complement(2823..>3691)
                     /gene="wecB"
                     /locus_tag="VLJ17_01760"
     CDS             complement(2823..>3691)
                     /gene="wecB"
                     /locus_tag="VLJ17_01760"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: protein motif:HMM:NF014411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008761 - UDP-N-acetylglucosamine
                     2-epimerase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HSV21736.1"
                     /translation="AVMTAYERVCQSDRPDWVIVVGDVNSTMAATLVAKKLVLQVAHL
                     EAGLRSFDRTMPEEINRLVTDVLADLLWTPSSDADANLLREGIPQQKITFVGNIMIDA
                     FEMLREEIAASRWPARHGLVEGEFAVATLHRPSNVDDPERLERLVGALERIARRLPVV
                     LPLHPRTRRRLEETRLMSRVEAASGLRLTPPLGYVEFMSVVVPARFALTDSGGVQEET
                     TYLGVPCLTLRNNTERPITVSKGSNQLVQLASLEADVDRVLSGPRQIGTRPDLWDGAT
                     AGRVVASLLAHI"
BASE COUNT          787 a         1131 c         1070 g          703 t
ORIGIN      
        1 gcgcgtcgaa gaacgtccgg ccgatcaggc tcagcacagg attgccaaga tagcgatgca
       61 ggaacggcat cgcgccaggt tcgatgccgc cgcggaatcg gttaccgatt acgagatcga
      121 aaccgtcacg cagtttggca acaaacggat cgaggttgag aaaatcgtag ctgtcgtcac
      181 catcacctat gatgacgtag cgcccgcgcg cagcgaaaat tccggcgcgc agcgctgcgc
      241 cgtagccgcg ttccacgacc tgaacaacgc gggcgcctgt ggtggtcgcg agcgcgatcg
      301 acccgtcggt tgagccatta tcagcgatca ccacctcgcc gttaatgtcg gcacgggcga
      361 taaaagcctt cgctttttca atgcagcgct caatggtttc cgcctcattg aggcaaggta
      421 tcaaaatact aagctcgatc cgatcgacac gccgaccagt gaattggcct tcagcgctcg
      481 ccatgggtgg aatccccgta gtattgcggg cctcaggcgg tcctggccag gcgattgtgc
      541 aaaatagccg cgaaggcccg attgccgaac ggaacacgca gcagcgacct cgacagcgac
      601 ttggcggccg ccgcacgatt gccgctacga tggtaggcag ccgcgcgttc gatgtcgagg
      661 gctgctgcaa aatgacgctg tgtctgcggc gcgaaccccg acgcatgctt gcgccacatg
      721 cgatcgagtg ccgggatgac cttatcggcg cggccgccga atgaaggggc gatgcgggca
      781 aggggctcgg cgagaaaacc gaacgatcgc acactcgcgt accgcagcag ccagtcccaa
      841 tcttcaagtc gtcgcaagcc tgtatcgaag cgcccgatct cctcgaacaa cgaacgacgg
      901 cacaacagcg tcgagcccgg actgacaaag catccccacg ccatttgctc caatccaatg
      961 aggccggtcg aaagacgcgg cgaaatgtga tcgcgggttc cggggcgaga tagcaagtag
     1021 gcggtgcagc ttgcctccca accgttctgg tgcattgccg ccatctggcg cgccagtttt
     1081 cccggcaacc agatgtcgtc ggagtcgagg aatgccaaaa gatcgctgtc ggccaccgcg
     1141 attgctgtat tacgcgcagc cgcggcgccc ccgtttctgt cgtgcctgat taggcgtatg
     1201 cgttgcttga acgggcgtag agttgccgca agatcgtcat ctgaggcatc gtcgaccacg
     1261 atgatgtcga gggtgcattc aggtgatggc aatgcctggt tgaccacact gtcgatggct
     1321 gcgccaatca ccgcggcacg gttgtaggct gggataatca ccgaaatcga ggcggccaac
     1381 acgaaggctc ctgtcaccgc tgcatcagcc agcccaagct ttagccagca aagaccgctg
     1441 gccacaaggg ttcaaagcgc gtcgcacgcg ccggctggaa ggccgaaaca catattttgg
     1501 cggcgctcaa tgcaacatca aaggcgccat agttcgacgc caggtggccg cgcggctcga
     1561 tcaagtctcc ctctaacgtc aagcaccact cccatcccct gcttcaataa gcctgtcact
     1621 aacggccacc cgtcgcgtac gaatgcttca tgtgccactg caaaaatcac ggcatcggcc
     1681 ggtcgcagtg cgtccttgct gagaagattg atctggtatt cccgctcagc atccccaggc
     1741 aaggccaacg gatcgtgcac ctgcacgtct atgccaaatg acttcaattc gtcgacaata
     1801 tcaacgacct tggaattgcg gatgtccgga acatcctcct tgaaggtcag ccccaatacc
     1861 gtaacggttg cgtcgctcgc gccggcgcgc agcaacaatc gcacgcactc gcgtgcgatg
     1921 cgagggccga caccgtcatt gatgcgccgg ccggcaagga tgatctccgg atggtacccg
     1981 gcccgctcgg cccgatgagt cagataatag ggatcgactc cgatgcagtg accgcccacc
     2041 aagccaggaa cgaacggcag aaaattccat ttggtctttg ccgtctccaa tacgtcgccg
     2101 gtatcaatgc ccagtgcctg acagatagcg gagagctcat tcatgagggc gatattgagg
     2161 tcgcgttgcg tgttctcaat caccttggcg gcctccgcca ccttgataga gggggcacgg
     2221 tggacgcctg cccgcaccac ggagccgtaa acgtccgcaa tgatgtcgag cgtctttttg
     2281 tcctggctgg caacgacttt cttgatggtt tcgaagcggt gagttctgtc gccgggattg
     2341 atccgttccg gcgagtagcc cacggtgaaa tccaacccgg cggtgagccc tgttacttcc
     2401 tcgagcacgg gaacacattc ttcttcgacg gcacctggat agacggtcga ctcgtaaaca
     2461 acgatgtcac cacgcttgag tgcagtgccg acggtccgcg acgcggagag cattgcgttc
     2521 aggtcgggac ggaaagcatc gtcgattggt gtcggtacag ttacgatata aaaattggcc
     2581 tcgtgcagca gtttcgcgtc ggttgtaaat tccaacgata tctgctgaag atctcggcag
     2641 tcaacttcgc gggtacggtc atgcccgctg cgcagctctg cgatacgact cggatcgatg
     2701 tcgaatccaa tgacccgcgc tgccgatcgc gcgaagctca ccgccacggg taggccgacg
     2761 tagccaagcc cgataacagc aattctccga ttgtgtttca cgccgattcc tgtttcagct
     2821 tgtcaaatat gtgcaaggag gctcgccacg acacgacccg cggtcgctcc atcccagaga
     2881 tccggacggg ttccgatctg ccgcggccct gacaaaacgc gatcgacatc ggcctccagc
     2941 gaggcgagtt gaaccagctg attgctgcct ttgctcaccg ttatgggccg ctcggtgtta
     3001 tttcgcagtg tgaggcatgg aacgccgaga taggtggtct cttcctgaac gcctccggaa
     3061 tccgtcagag caaagcgtgc agggacgacg actgacataa actccacata cccgagcggc
     3121 ggcgtcagcc gcaaccccga cgcggcctcc acgcggctca tgagacgggt ctcttcgagc
     3181 cggcgccgcg tgcgcggatg caatgggagc acgaccggca gccggcgggc gatgcgctct
     3241 agcgcaccca ccagcctctc cagccgttcc ggatcatcga cattgctcgg tcgatgcaaa
     3301 gtggcgacgg cgaattcgcc ctctacgagg ccatggcgcg ctggccatcg cgacgccgcg
     3361 atctcctccc gaagcatctc gaatgcatcg atcatgatgt tgccaacgaa agtgatcttc
     3421 tgttgcggaa taccttcgcg cagcaagttt gcatcggcgt cggaagacgg tgtccaaagc
     3481 agatccgcca ggacgtcggt aacgaggcga ttgatctctt ccggcatggt gcgatcaaag
     3541 ctgcgcagcc ctgcctccag atgagcaact tggaggacga gtttcttggc aacgagcgtc
     3601 gctgccattg tcgagttcac atcacctacc acaataaccc agtctggccg gtccgactgg
     3661 caaacacgtt cgtaggccgt cattacggca g
//
LOCUS       DATILV010000079         1632 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2574428, whole genome shotgun sequence.
ACCESSION   DATILV010000079 DATILV010000000
VERSION     DATILV010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1632)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1632)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1632
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2574428"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            64..264
                     /locus_tag="VLJ17_01765"
     CDS             64..264
                     /locus_tag="VLJ17_01765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21737.1"
                     /translation="MTSAIRTVFARFAELGSVRRVWLWLRSEGRRGLFQKDYVGPTLR
                     DNLGLAILRATDWHAAHRAPVR"
     gene            603..1022
                     /locus_tag="VLJ17_01770"
     CDS             603..1022
                     /locus_tag="VLJ17_01770"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HSV21738.1"
                     /translation="MTIASDLLQQHIQTLVADNARWQTLIADDLVWELPYGPGIGDPA
                     RLAGREEVMRHVTWFLGAVENVRFFDLQVHAFADPEAAVAEVKAEALIKPTRRTYSQQ
                     YVVFLRAAGGKIAFLREYFDPTRAAKAMNRPILGLES"
BASE COUNT          284 a          497 c          531 g          320 t
ORIGIN      
        1 cgcagttccc agcctgcacc acccggataa gtcaaaaact tactttttca ccccgatgcg
       61 gcggtgacct cggcaatccg caccgtcttt gcgcgctttg ccgaactcgg ttcggtgcgt
      121 cgggtctggc tttggctgcg cagcgagggg cgccgtgggt tgttccaaaa ggactatgtc
      181 ggcccgacat tgcgcgacaa tctggggttg gcgatactca gggccaccga ttggcacgcg
      241 gcgcatcgag cgcctgtgcg atgaagatct ccgccgttgc gctatcctgg gccacacgca
      301 tcgggtgccg ccgaaatgaa accagcctct ccgccgttac gcagttttct gttcgcgccg
      361 ggcaatcatg ccaggcgcgt ggccaatgca tttgaggcgc gacttgctca acggccggtc
      421 tttgatcata caaataagta gtgaaatcag gttgcggaac tgccgcggga gcacggccgc
      481 gccagctcca ccaatctggc ctgggagctg cagctgctct cagggcgctt gggcaccggt
      541 gtctgacgcc ggagcggata gcccgggcgg ccaaggccgc acactccaag gaggaggctt
      601 cgatgactat cgcgtccgat ctcctgcagc aacacatcca gacgctcgtg gccgacaacg
      661 cgcgatggca aacgctgatc gccgatgacc tcgtgtggga gctcccctat ggtcccggca
      721 tcggcgaccc agcgcggcta gcggggcggg aagaggtgat gcgccacgtg acgtggtttc
      781 tgggggcggt ggagaacgtc cgcttcttcg accttcaggt gcatgccttc gctgatccag
      841 aggcggcggt cgccgaggtc aaagcggagg cgctcatcaa gccgacgcgc cgcacctaca
      901 gccagcagta cgtggtgttc ctccgtgccg cgggcggcaa gatcgcgttt ctgcgggaat
      961 acttcgaccc cacgcgtgca gccaaggcga tgaacaggcc gattctcggc ctcgaatcct
     1021 gaggatgggc ggcggaaggc tccgctggag cgcgcaagat tacaacggtc gccggacgtc
     1081 cgctctccac ccgacatcgc cgttccccga tcgcgccggc aaggtctctt taggggcaat
     1141 gaagagcggt tcccgccacc aaggctgagc ggccggtgtg ggtttagaaa gcggtcagtg
     1201 gctattgatg attaggcgac gtaggctggg tcaggttctt aggcgactgg cgcgtgccta
     1261 actctaccca tgcgattccg agtcgagcac ttacgtagcc gccgcatgtg caccgcgatt
     1321 aggtgcgcgc tcgggtgatc gaaccttcgg agagttcggc gcggatgcga atgattggag
     1381 actgcaccaa tgtttcgcgg tcagcgcgcg agctttcccg tcgacgtggg gcgttgagaa
     1441 ttcaccggtg aacgtgtttt gaccgaaacg ttcggcagtt tggtgtcgct tctctttctg
     1501 gggtttctcc tcggcatccg gcacgccacc gacccggacc acgtcgtcgc catcgccacc
     1561 atcgtgagcc gccagcgtaa tttgcggggt tcggcgatga ttggtgcggt atgggggctg
     1621 ggccacacgc tc
//
LOCUS       DATILV010000080        10280 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3851986, whole genome shotgun sequence.
ACCESSION   DATILV010000080 DATILV010000000
VERSION     DATILV010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10280)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10280)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10280
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3851986"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1011)
                     /locus_tag="VLJ17_01775"
     CDS             complement(<1..1011)
                     /locus_tag="VLJ17_01775"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HSV21739.1"
                     /translation="MTAAPLRAPPGTLPPLTVRTVQTVAVTVPMRFALGTSAATVREA
                     PLLLVDLLTEEGIIGRSYVFCYRPSGSIAIAAVLREAVGLIAGDQLAPGAIAAKLERR
                     YALIGVTGVVRMALAVLDMALWDALAVAAGLPLAVLLGATPRPLPAYNSCGLGLMTPE
                     AAADEAEQLLEGGFQAVKLRLGYATLAQDLAVTRAVRRRLADSIAIMVDYNQALTVVE
                     AMARGLAMADEGVYWIEEPIRHDNIAGYAKLTRKLALPIQLGENFDGAKAMTAALDAA
                     ACNFVMPDAGRIGGVTGWLQAAGVAASRDVEMSSHLLPEVSAHLLAATPTAHWLEYVD
                     WAN"
     gene            complement(1008..1934)
                     /locus_tag="VLJ17_01780"
     CDS             complement(1008..1934)
                     /locus_tag="VLJ17_01780"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: protein motif:HMM:TIGR00745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008677 - 2-dehydropantoate 2-reductase
                     activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HSV21740.1"
                     /translation="MKIVVMGSGGVGGYFGARLAKGGADVTFVARGAHLAAMRQHGLA
                     VEGGPDDIYLPTVKAVEDPAAIGIVDLVMFAVKLWDTESAIAHIRPIVGPDTAVISFQ
                     NGVLKDKYLAHAFGLPRIMGGVCYVATAIARPGVIGRTGTLERMVFGEFDGAASARAT
                     RFLDACLASGIKAELANDIRREIWEKFVFLVALSGATTTMRSAIGPIRTNPQTRAFLL
                     DVMREVVAVGRAQSINLPEDYAERRLRLADDLAPDMTSSMHHDLERGNRLEVRWLSGS
                     VVELGHAVGVPTPLNRAIADILALRAEGASVR"
     gene            2466..2987
                     /locus_tag="VLJ17_01785"
     CDS             2466..2987
                     /locus_tag="VLJ17_01785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock domain-containing protein"
                     /protein_id="HSV21741.1"
                     /translation="MPTGPERQAKVKWFNGEKGFGFVELTDGSGEAFLHISVVEGAGH
                     AALESGTTLTVRVGQGAKGPQITEITAVDTSTAEPSRGPRPGGRPPPRERSFDRPTGP
                     AEEVDGQVKWYDPKKGFGFVAVDGSKDVFIHRSVLAREGINDLPEGQRIRMKVVPGAK
                     GLEAIGLSLKNDS"
     gene            complement(3104..6223)
                     /locus_tag="VLJ17_01790"
     CDS             complement(3104..6223)
                     /locus_tag="VLJ17_01790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018430693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSV21742.1"
                     /translation="MTLPMLCIERPVMTTLLTMAIVVVGSVGYFFLPVAALPQVDFPT
                     IAVSTTLPGASPATMAASISTPLEREFSAIAGIDSITSVSGLGIGRITVQFNLNRSID
                     AAAQDIQAAIGNAARKLPAEMTTPPSYRKINPGASAVLQLTLVSNSLPASTVNEFAEI
                     NIGQRLSTLPGVAQVAIFGPQKYAVRVQVDPDLLASRGISMDEIQRAIAAASSTTPVG
                     ALSGPQKAATLQADTQLTQASGYLPLIVAYRNGAPVQLGDVAKVIDSVQVRESWNWYN
                     GSRAITVAVFRQPDANTVEVVNQVKALIPVFRAELPGAIDINVLQNRAAPIQAAVADV
                     QRTLMLTVFLVVLVIYLFVRRLSATIIAALALPVSIIGTFGAMYLGGYSLNNVSLLAL
                     TLAVGFVVDDAIVMLENIVRHTEAGLEPMEAALKGSREITFTIMSMTISLVAVFIPVF
                     FMGGVVGRVFHEFAIVIGIAILASGLVSLTLTPMLCSRFLRSHLHQAPDRPIARLLER
                     GFAGMLRGYEISLGWVLRHQRVTTVVTLLTIAITGYLFYSIPKGFFPIEDTGYIIGGS
                     ETAEDTSFAGMLDKQIKLEAVLRASPHVVSYNLEVSLGGSRFGINSGDLYIQLKPRGQ
                     RPPIGEVIQELRRQAGAIAGLNVFLNPAQNLQIGARPSKSLYQYTLQAGNLDELYRFA
                     PLVDTEIRKLAVLQDISSDLQIKSPQAILNVDRRKAAALGLTSEQIRTTLYDSFGSRQ
                     VATIYTASNDYAVILEIDPAFQQRSDDLSKVFVRSSAGQLIPLGTVATFTHGAGPLTV
                     NHQGQLPAVTISFNLAPGVALGEAIERIQEMERQLVFPPTITAGFAGTAQVFQQSLRG
                     QGWLLLATVLVIYVVLGILYESFIHPITILSGLPAAGVGALLTLMLFKMDLSVIAIIG
                     VIMLVGIVKKNAIMMVDFAIAAQRDHGEPPQRAIHRACLLRFRPIMMTTVAAIMGGLP
                     IALGLGVGAELRQPLGVAVVGGLLTSQLLTLYITPVIYLSLESMRGRQPSFASGGRSV
                     RPAAAEAAE"
     gene            complement(6220..7395)
                     /locus_tag="VLJ17_01795"
     CDS             complement(6220..7395)
                     /locus_tag="VLJ17_01795"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSV21743.1"
                     /translation="MKRLLLATLLMAAVGSGYYYRDYFFGTATETRPARPPAAQPVVA
                     DVAAEISAPIEVTAIGNVQSIATVMVRSRIDGEIAQVHFEEGQEVNSGDLLFSLDDRV
                     ARAQLQLSEANLERDRAQLRRFQLEVARQTGLANRGVAPAQKLDDVTTSAAVFEATVR
                     ASEAAVETARINLNFTTIRAPIAGRTGSVALKRGNVVKAVDTLPTVMPLVTITQLRPI
                     YVTFTVPERHLGDLRTALALGRLPVVATIPSSPLNPVAGQLTFIDNLVDAATGTIALK
                     STFANDDARLWPGQFVNVTVTLRVQANALAVPNAAIQIGQNGPYVFVIKPDSTVELRL
                     VRVDRTVANKTVIAEGLAAGDRVVVDGQLRLTNGTRIAVQRSEEPAPKAQPVAEQAP"
     gene            complement(7495..8550)
                     /locus_tag="VLJ17_01800"
     CDS             complement(7495..8550)
                     /locus_tag="VLJ17_01800"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV21744.1"
                     /translation="MSTHLQSEQIQEGLSRRGLVQALAAGAAAASVATPSLAQQTAVL
                     AEATSADYARDPTRWGSPEVAALFPGFKHLDVRTKGAVIRLRHGGSGAPLLLLHGNPN
                     NHVLWYAVAARLAERYHVVLADLRGYGDSSLPEPGPNLINYSFRVMAEDMIEVMEGLG
                     HQRFFLAGHDRGARLSHRLCLDHPDRVMKLCLLDMLPNYHVWTNANMKWGLNTWHWLF
                     MAQPEPFPETLMSSVPAEWFLKSRGSSRQVPKIVFDEYIRCYTKKTITGSCRDYRAGA
                     TIDFEMDAADKDRQIGMPLLILWGTRGAPPTQEFPTVWGKFASNLIDAQPLPTGHYLQ
                     EEAPDRVIDHFLKFFTT"
     gene            8925..9776
                     /locus_tag="VLJ17_01805"
     CDS             8925..9776
                     /locus_tag="VLJ17_01805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21745.1"
                     /translation="MPTLASSAKLLAGGVLTGFACAALSAGAAAQQKASPPDFSSSSA
                     GWLTFNVDFSIVPGGTSPMRSDPAHPRVSNQEAAATGKQPTYFIADLSNIAILKPWVV
                     ERMKKDNAEVLAGKIAFTPHSSCTHAGVPGFHLYGFQPLYFVQTPKEVVMIYSNDQQV
                     RHVYLDVPHSANPTPSWYGESVGYYEGDTLVVDTIALNDRTFVNNFRTPHTEKLHVVE
                     RFKLVDDGKAMQVDITFEDPDAFNAPWSVVQRYDRIQRPMVEEICAENNQHLFDYHMP
                     VANNPDF"
     gene            complement(9845..>10280)
                     /locus_tag="VLJ17_01810"
     CDS             complement(9845..>10280)
                     /locus_tag="VLJ17_01810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21746.1"
                     /translation="REIGTPFPWSQGPRRMGIDREHGIIWVANSWSGTLGRIDAETLQ
                     TTLIPLPNTFTNQPYAAIPDKHQNVWTPLWTTDQIAKYDSKSGTWTMFDLPTRGTEVR
                     IPALLERGDNVEVVFAYARSSKIAVLSVRSDADMAAAQARAQ"
BASE COUNT         2037 a         3079 c         3217 g         1947 t
ORIGIN      
        1 gttcgcccag tccacatatt cgagccaatg ggcagttggg gtcgcagcaa gcagatgggc
       61 gctcacctcc ggcagcagat gcgaagacat ttcgacatcg cgcgatgctg ccaccccggc
      121 agcctgcagc cacccggtga cgccgccgat gcggcctgcg tcgggcatca cgaaattgca
      181 ggccgccgca tcaagcgctg cagtcatcgc cttggcaccg tcgaaattct cgccgagttg
      241 gattggcaaa gcgagcttgc gggtgagctt ggcgtagccc gcgatgttgt cgtgacggat
      301 tggctcttcg atccaataga ccccttcatc cgccatcgcc aatccgcgtg ccattgcctc
      361 caccaccgtg agggcttggt tgtagtcgac catgatggcg atggagtcgg cgaggcgccg
      421 ccgcaccgcg cgggtgacgg cgagatcttg cgcaagcgtc gcatagccga gcctgagctt
      481 gacagcctga aacccgcctt caagaagctg ctccgcttcg tcggctgcgg cttccggcgt
      541 catcagcccg agcccgcatg aattgtaggc cggcagcggc cgcggcgtgg cacctagcaa
      601 gacggcaagt ggaagcccag ccgcgacggc gagtgcatcc cacagcgcca tgtcgagcac
      661 cgcgagcgcc atgcggacga cgccggtgac gccaatgagc gcatagcgac gttcgagctt
      721 ggcggcaatc gcccccggcg ccagctgatc gccggcgatc aagccgaccg cttcacgcaa
      781 tactgcggcg attgcgatac taccgcttgg gcggtaacaa aatacatagc tgcgcccgat
      841 gatgccttcc tcggtcagaa ggtcgacgag cagcagcggc gcttcgcgca cggtcgcggc
      901 gctggtgccg agcgcgaatc gcatcggaac cgtgaccgcg accgtctgca cggtgcgtac
      961 cgtcagcggc ggcagcgtac caggaggcgc gcgaaggggc gcagctgtca tcgtacgctt
     1021 gcgccttcag cgcgcagtgc caggatatcg gcgatcgccc ggttgagtgg ggtcggcacc
     1081 ccgaccgcgt ggccaagttc gaccacactg cccgacagcc agcgcacctc aagccggttg
     1141 ccgcgctcta ggtcatggtg catcgacgaa gtcatgtctg gggcaaggtc atcggcgagc
     1201 cgaagccggc gctccgcgta atcctccggt aagttgatgc tttgcgcgcg gccgaccgcc
     1261 accacctcgc gcatcacatc gagcaggaag gcgcgggtct gcggattggt gcgaatcggc
     1321 ccgatcgcac ttcgcatggt ggtggtcgct cccgaaaggg cgaccaggaa gacgaatttt
     1381 tcccagattt cgcggcgaat gtcgttggcg agttcggcct tgatgccgct cgccaagcag
     1441 gcatcgagaa aacgggtcgc gcgcgctgac gccgcaccgt cgaattcacc gaacaccata
     1501 cgctccagcg tgccggtgcg tccgatcaca ccgggccgtg cgatcgcggt tgccacgtag
     1561 cataccccgc ccatgatccg gggtaggccg aacgcgtggg ccaaatattt atccttcaga
     1621 acgccgtttt ggaaagaaat cactgctgta tctggcccca cgatcggcct gatgtgggcg
     1681 atcgccgatt cggtgtccca gagcttgacg gcaaacatga caagatcaac gatgccaatc
     1741 gctgccgggt cctcgaccgc cttcaccgtc ggcaggtaaa tgtcgtccgg ccccccttct
     1801 actgcgaggc cgtgctggcg catggcggcc agatgggcgc cacgcgccac aaaggtcacg
     1861 tcggcgccac ccttggcgag ccgtgcaccg aaataaccgc cgacgccgcc tgagcccatc
     1921 acgacaattt tcacgtacgt gctcctcacc ggtccgaccg gcagtaatgg cggcctggcc
     1981 gccgctatag cattttttcc gcttcgtccg tgcttggctc accggtgaga agtgtcaccc
     2041 ggttgtggtg cggcggccgc caataagaat atgatttatt tcagtatttt atccatgagg
     2101 gcgacgaatc gctgcgcaga tcgggcgtcg agcgccatgc atttgtgggt aatctcagcg
     2161 cgacactaac caagtcctct gttctgccat tgataacgtt ttcttgatcc ccctagtgtg
     2221 tttgcctggg tccggcgcga ccccggcgaa agatgtttca tttcttgatt tcccatctgg
     2281 cgtacattcg cgcgatatgc gattgttcag ccttgaacga cttagacaga tcgaagatgg
     2341 gacgaggcaa agatttccgc gatcgtcggc gcggttattc cgacgaacca ccagaacccc
     2401 ctccttcatt tggacgccct ccgccgcggt cgttcgaccg tccggcgcgg gaggcgtctc
     2461 ggcctgtgcc caccgggccg gaacggcagg ccaaggtgaa gtggtttaac ggcgagaagg
     2521 gattcgggtt cgtcgagttg accgatgggt ccggcgaagc ctttctgcac atcagcgttg
     2581 tagagggtgc cgggcacgcc gcgctcgaat cgggcaccac cttgacggtg cgagtggggc
     2641 agggggcgaa gggtccccag atcactgaaa tcaccgccgt ggatacgagt acggccgagc
     2701 cgtctcgcgg tccgcgacct ggcggtcggc cgccgccgcg ggagcgctcc ttcgaccggc
     2761 cgaccgggcc cgcggaggaa gtcgacggcc aagtcaaatg gtacgatccg aagaagggct
     2821 tcggcttcgt tgcggtggac ggcagcaagg atgtcttcat ccaccgttcg gtgctcgccc
     2881 gcgaaggcat caatgatctg ccggaaggcc agcgcatccg catgaaggtg gtgccgggcg
     2941 ccaagggcct cgaagctatc ggattgtctc tcaagaacga cagctaagtg ccgccgccct
     3001 gaaatcaaac tgaaatcaaa aagaggtgag ggcccttttt gatttcagta atccgcagaa
     3061 ggttaggcgc gcgccctccg ttcaagcagg aaccgggggt gatttactcc gccgcctcgg
     3121 ccgccgccgg ccgaacgctc cgcccgccac ttgcgaagct cggctgcctg ccgcgcatac
     3181 tctctaacga gagatagatg acgggggtga tgtagagcgt gaggagttgc gaagtcagga
     3241 gcccgccgac cacggcaacg cccaagggct gccgaagctc ggccccaacg ccaagtccaa
     3301 gtgcaatcgg caggccgccc atgattgccg ccaccgtcgt catcatgatg gggcggaagc
     3361 gcaacaagca tgcgcgatga atggctcgtt ggggcggttc gccatggtcg cgttgcgcgg
     3421 cgatcgcgaa atcgaccatc atgattgcgt ttttcttgac gataccgacc agcatgatga
     3481 cgccgatgat ggcgatgacg ctgagatcca tcttgaagag catcagggtc aagagcgcac
     3541 ccacgcccgc tgccggaagg ccggaaagga tcgtgatcgg gtggataaag ctctcgtaga
     3601 gaatgccgag cacaacgtag atgaccagaa cggtcgccaa cagtagccag ccctgtcccc
     3661 gtaacgactg ctggaacacc tgtgcggtgc cggcaaatcc tgccgtgatg gtcggcggga
     3721 ataccagctg ccgctccatc tcctggatgc gctcgatcgc ctcgccaagt gcaacaccgg
     3781 gcgcgaggtt aaatgaaatc gtcacggctg gaagttggcc ctggtggttg accgtcaagg
     3841 gaccggcgcc gtgagtaaaa gttgcgaccg tgccgagcgg aatgagctgg ccagcgctcg
     3901 atcggacgaa caccttcgac aggtcgtctg aacgctgctg gaacgctgga tcgatttcca
     3961 aaatcaccgc gtagtcgttg ctggccgtat agatggtcgc gacctgccgt gatccaaacg
     4021 agtcgtaaag cgtggtgcgg atttgctctg acgtcaggcc gagagccgcc gccttccgac
     4081 ggtcgacgtt aagaatggct tgcgggctct tgatctgtag atccgaagat atgtcctgca
     4141 gcaccgcgag cttgcggatt tccgtgtcga cgaggggcgc aaagcggtat agttcgtcga
     4201 gattgccggc ctgcaaggtg tactggtaaa ggcttttgct cgggcgggca ccgatctgga
     4261 gattctgggc gggattcaag aatacattca agcccgcaat ggcgccggcc tggcggcgca
     4321 attcctgaat tacctcgccg atgggcggtc gctgcccacg cggtttgagc tggatgtaca
     4381 aatcgccgct gtttattccg aatctgctgc cgccgaggct gacctccaag ttgtatgaca
     4441 cgacgtgggg actagcgcgc aacacggctt cgagttttat ctgcttgtcg agcataccgg
     4501 caaacgacgt atcctccgcc gtttcgctgc cgccgatgat gtatccggtg tcctcgatgg
     4561 ggaagaagcc ctttggaatt gagtaaaaca gatatccggt gatcgcaatg gtcagcagcg
     4621 tcacaacggt cgtgacgcgc tgatggcgca gcacccagcc gagcgagatt tcatagccac
     4681 ggagcatgcc ggcaaagccc cgttcgagca ggcgcgcgat cggtcgatca ggggcttgat
     4741 gaaggtgcga gcgcaggaat cgactgcaca gcattggtgt caacgtcagc gacaccaatc
     4801 ccgacgctag aatcgcgatg ccgatcacaa tggcaaattc atggaacacc cgcccgacca
     4861 cgccgcccat gaagaaaacc ggaatgaaga cggccaccag ggagatggtc atggacatga
     4921 ttgtgaaggt gatctcgcgc gaacctttga gggccgcttc catcggttcc aaaccggctt
     4981 cggtgtggcg gacgatgttt tcgagcatca cgatggcatc gtcgaccaca aacccgaccg
     5041 cgagcgtaag ggcgagcagc gaaacattgt tgagcgaata tccgccgaga tacatggcgc
     5101 cgaacgtgcc gatgatcgat accggcaggg cgagcgccgc aatgatggtt gccgacaggc
     5161 gtcggacgaa caaatagatg accagtacca ccagaaagac ggtgagcatc aacgtccgct
     5221 ggacgtcggc gacggcggcc tggatcggtg cggcacgatt ctgcagaaca ttgatgtcga
     5281 tggcaccggg gagttcggcg cgaaaaaccg ggattagggc tttgacctga ttgacgacct
     5341 caacggtatt tgcgtcgggc tgacgaaata ccgcaaccgt gatggcgcgc gagccgttgt
     5401 accagttcca ggattcgcgg acctggacgc tatcgatgac ctttgcgacg tcgccaagct
     5461 gcactggcgc gccgttgcga taggcgacga tgagcggcag atatccggac gcctgagtca
     5521 gctgggtatc cgcctgcaga gtcgcggcct tttgcgggcc actgagcgcc ccgaccggtg
     5581 tcgtcgaact ggctgccgcg atcgcgcgtt gaatctcgtc catggagatg ccgcggctgg
     5641 ccagcaagtc gggatcgact tggaccctta cggcatattt ttgggggccg aagatagcga
     5701 cctgcgcgac gccgggcagc gtggaaagcc gctggccgat attgatttcc gcaaattcgt
     5761 tgacggttga agccgggagg ctgttggaaa cgagggtcag ctgcagcacc gccgaagcac
     5821 ccggatttat ctttcgataa gacggcggcg tcgtcatctc ggccgggagc ttgcgcgcgg
     5881 cattcccgat cgctgcttga atatcctgag ccgcggcgtc gatgcttcga ttgaggttga
     5941 actgcacggt gatgcggccg atgccgagcc cgctgactga tgtgatcgag tcgatgcccg
     6001 cgatggcaga aaattctcgc tcaagcggcg ttgagatcga cgccgccatc gtcgcggggc
     6061 tggcgcccgg cagggtggtc gaaaccgcga tggtcgggaa gtcaacttgc ggcagtgccg
     6121 ccaccggcaa gaagaaatag ccgacgctgc cgacgaccac gatcgccatg gtcaacaggg
     6181 tcgtcatcac cggacgctcg atgcacagca tcggaagcgt catggcgcct gctccgccac
     6241 cggctgcgcc ttcggcgcag gctcttcgga gcgctgaacg gcaatgcgtg tcccgttagt
     6301 aagccgcagc tggccatcga cgacgacgcg atcgccggcc gcaagccctt cggcgatcac
     6361 agttttgttg gcgacagtgc gatcgacgcg gacaagccgt agctcgacgg tcgagtccgg
     6421 tttgatcaca aacacgtacg ggccgttctg cccgatctgg atggccgcgt tcggtacggc
     6481 gagagcgttc gcttggacgc gaagggtgac ggtcacgttg acgaactggc caggccacaa
     6541 ccgtgcatcg tcattggcga acgtcgactt gagggcgatc gtgccggtcg cggcatcgac
     6601 cagattgtcg atgaaggtca actgtccggc gaccggattt agcggcgagc tcggtatagt
     6661 cgcgacaacg ggcaggcgtc ccaatgccag ggccgtgcga agatcgccaa gatgcctttc
     6721 aggcaccgtg aacgtaacgt agatcggccg caactgggtg atggtgacca agggcatgac
     6781 cgtcggcagg gtatcgaccg ctttgacgac attaccccgc ttgagcgcga cggatccggt
     6841 tcgccccgca attggcgccc gaatggtcgt gaagttcagg ttgatgcgcg cggtttcgac
     6901 ggccgcttcg cttgcccgca ctgtcgcttc aaagaccgcc gcgcttgtcg tcacatcgtc
     6961 gagcttttgc gccggcgcaa cgccccggtt tgccagtccg gtctggcgcg caacttccaa
     7021 ttggaaccgc cgcagttgag cgcggtcgcg ctccagattg gcctcactta gttgcagctg
     7081 cgcgcgagcg acgcggtcat cgagactgaa gagaagatcg ccgctgttga cctcctgacc
     7141 ttcctcgaaa tgaacctgcg cgatctctcc gtcgatgcga gatctgacca tcacggtcgc
     7201 gatggactgg acattgccga tggcggtgac ctcgatcggc gccgagattt ccgccgcgac
     7261 gtcggccacc acgggctgag ctgctggagg ccgtgcgggt cgggtttccg tcgcggttcc
     7321 gaagaaatag tcccgataat aatacccgga gccgacggca gccatcaaaa gcgtggccag
     7381 caacagcctc ttcatggcac gtttccccgg tcgcgccact tctgagagcg gcgtcgccgg
     7441 ggtcaatttg acccctagcc atcagcgagc gcaaggacca aatcgctttg ccgttcacgt
     7501 cgtgaagaat ttgaggaaat ggtcgatgac gcggtcgggg gcttcttctt gaaggtagtg
     7561 gccggtcggg agcggttgag catcgatgag gttgctggcg aacttgcccc acaccgtggg
     7621 aaactcctgg gtcggcggtg cccccctggt tccccacagt atcaatagcg gcattccgat
     7681 ctggcgatcc ttgtcggctg catccatctc gaaatcgatg gtggcgccgg cccgatagtc
     7741 gcggcaggag ccggtgatcg tctttttggt gtagcagcgg atatattcgt cgaacacgat
     7801 tttgggcacc tgcctgctgc tgccgcggct tttcaggaac cattcggccg gaacagagct
     7861 catcagcgtt tcgggaaacg gctccggttg cgccatgaac aaccagtgcc aggtgttgag
     7921 accccacttc atgtttgcgt tggtccacac gtgataattc ggcagcatgt ccaggaggca
     7981 gagcttcatg acccgatcgg gatggtcgag gcacaggcga tggctcaaac gcgcgccgcg
     8041 atcgtggccg gccaggaaga agcgctgatg accaaggcct tccatgactt caatcatgtc
     8101 ttccgccatg acgcgaaagc tgtagttgat gagattggga ccgggctcgg gcagcgagct
     8161 gtcgccgtag ccgcgcagat cggcgagaac cacgtgatag cgttccgcaa gccgtgccgc
     8221 gaccgcgtac cacaacacgt gattgttcgg attgccatgc aggagcagca ggggcgcgcc
     8281 ggaaccgcca tggcgtagcc gaatgacggc acccttggtg cgcacgtcga gatgtttgaa
     8341 tcccgggaag agggctgcga cttccgggct gccccagcgc gtcggatcgc gggcatagtc
     8401 ggcagacgtc gcctcggcca gcaccgccgt ttgctgagcc aatgacggcg tcgcgacgct
     8461 cgccgcggcg gcgcctgcgg ccaaggcctg aaccaagccg cggcggctca agccttcttg
     8521 gatttgttcg gattggagat gcgtgctcat ttcggcctca ctcttttgcg tgttggcaaa
     8581 aacgacagcg cagcttaggt ggcggaccgc ctgaattcca gcagaattac tcgcagattt
     8641 agctcacaat tactcgcaga catagctcac aagatcacaa tcaagctgac ggtctcgcgc
     8701 aaggaacttg tgtgacagca cgatcacgca agttgatcac cgccagctca atgtctggcc
     8761 cgcgacctcg atcgctcatg cctcccgcgt accgcgtgac gaatgtgccg aagcgacgta
     8821 agatgaacga attcgctctg aggacaaacc ctgcagccat gataacgaga ggtaacgaac
     8881 tctcgcccac gagaaccggc ggggtcatgc gaaggaggta aaccatgccc acattggctt
     8941 cgagcgcaaa actgcttgcc ggtggcgtct tgaccggctt cgcctgcgcg gcgctcagcg
     9001 ctggggcggc ggcgcaacag aaggcgtcgc cgccggattt ctcgtcgagc agcgccgggt
     9061 ggctgacctt caatgtcgat ttttcaattg tccccggcgg gaccagtccg atgcgcagtg
     9121 atcccgccca tccgcgcgtc agcaatcaag aggccgcggc aaccggcaag cagccgacct
     9181 attttattgc cgatctcagc aacattgcaa ttctcaagcc ctgggtcgtt gagcgcatga
     9241 agaaggacaa tgcggaagtg ctggcaggaa agatcgcctt tacaccgcac tccagctgta
     9301 cgcacgccgg cgttcccggc tttcatctct atgggttcca gccgctctac ttcgttcaga
     9361 cgccgaagga agtcgtcatg atatattcga acgaccaaca ggttcggcac gtgtatctcg
     9421 acgtgcctca ttcggcgaat ccgacgccgt cttggtacgg cgagtcagtc ggctattacg
     9481 agggagacac gctggtggtc gacacgatcg cgttgaacga caggactttc gtcaataact
     9541 tccgcacgcc gcacaccgag aagctgcacg tcgtcgagcg ctttaaactg gtcgacgacg
     9601 gcaaggcgat gcaagtcgac atcacgtttg aggatccgga tgctttcaac gcgccatggt
     9661 cggtggtgca gcgttatgat cgaattcagc gaccgatggt cgaggaaatt tgcgccgaga
     9721 acaaccagca tctgttcgac tatcacatgc cggtagcaaa caacccggac ttctgagcgc
     9781 ggggcaggat tttcgctgcg ctcaatccgg ccttatgagc ttcatccgcg ctacaagctg
     9841 agccctactg cgcccgggct tgcgcggccg ccatgtcggc atcgctgcgc accgaaagca
     9901 ctgcgatctt gctcgagcgc gcataggcga acactacctc gacattgtca ccgcgctcga
     9961 gcagcgcggg gatccggact tcggtgccac gggtcggcaa gtcgaacatt gtccatgtgc
    10021 cggacttgga gtcgtatttg gcgatctggt cggtggtcca cagtggcgtc cacacgttct
    10081 gatgtttatc cggaatggcg gcatagggct gattagtaaa agtgttgggc aatggaatga
    10141 gggtcgtctg cagagtttcg gcatcgattc tgcccagcgt tccgctccac gaattcgcaa
    10201 cccaaatgat gccgtgctcg cgatcgattc ccatgcggcg cggcccttgt gaccacggga
    10261 acggcgtgcc gatttcgcgc
//
LOCUS       DATILV010000081         4144 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3085700, whole genome shotgun sequence.
ACCESSION   DATILV010000081 DATILV010000000
VERSION     DATILV010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4144
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3085700"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(91..732)
                     /locus_tag="VLJ17_01815"
     CDS             complement(91..732)
                     /locus_tag="VLJ17_01815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HSV21747.1"
                     /translation="MAEASKPIDVEQTRIVLGLLEYVERGGEQSQRRLASELGVALGL
                     ANAYLKRCIKKGLVKVSQAPARRYAYYLTPHGFAEKTRLTLEFMSYSFALFRRAKTDC
                     TAALQAARERGYSRIALLGASDLAEIAAICALDGGFIVSAVVDPELESPRFAGALVVS
                     DIDLIAPPPDALLITDMRSARTSAQAAVTKFGFERVLVPALLGVRPSDLCGGA"
     gene            complement(1013..1252)
                     /locus_tag="VLJ17_01820"
     CDS             complement(1013..1252)
                     /locus_tag="VLJ17_01820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21748.1"
                     /translation="MAERLEIEPGQLTTSGYPMGASFLFLCQLLLVGLVGALGYVGIS
                     SAVALLGLFLFIFVMVLLIVGCTAPETWLGPHRHG"
     gene            complement(1412..2044)
                     /locus_tag="VLJ17_01825"
     CDS             complement(1412..2044)
                     /locus_tag="VLJ17_01825"
                     /inference="COORDINATES: protein motif:HMM:NF012967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-homoserine-lactone synthase"
                     /protein_id="HSV21749.1"
                     /translation="MIVVIESHNAHEYSGLMDEMFRLRARVFRDRLGWDVQVINGKER
                     DKYDDMTPVYIICTDERAREVKGCLRLLPTTGPTVLADNFFDTLPDGVHLSAPTIWEC
                     TRFCLDDRLLIEGHRDELLSVSGALIAGLGEVAIRAGIESILGNFDAAMLRIYRRIGC
                     EVEVLGSTLRYGRPVYLGLFPISEPILRNVKARLRDAQLLAATPHTRASA"
     gene            complement(2320..3045)
                     /locus_tag="VLJ17_01830"
     CDS             complement(2320..3045)
                     /locus_tag="VLJ17_01830"
                     /inference="COORDINATES: protein motif:HMM:NF015437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR family transcriptional regulator"
                     /protein_id="HSV21750.1"
                     /translation="MATSLPNEEMLLKAFAIVDNTPDMEMMIAELRDLLDVDHIVYHS
                     SKLGASPSADPYIRLTYPAAWIKRYLQMGYIDIDPVIREGFRRALPFDWSELKIQGAE
                     EVSFLTDALAHGVGPHGLSIPLQSKYGHRALFSISFSRSKDEWTKFVKTSLPALIEIA
                     NRIHRRVIYEVFGEDRPHLSLRELECLRWIACGKDTCEIAIILDISAHTARDYLKSAR
                     YKLDSVTSAQAVTKAVKLGLLIL"
     gene            complement(3662..3976)
                     /locus_tag="VLJ17_01835"
     CDS             complement(3662..3976)
                     /locus_tag="VLJ17_01835"
                     /inference="COORDINATES: protein motif:HMM:NF018151.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HdeA/HdeB family chaperone"
                     /protein_id="HSV21751.1"
                     /translation="MFARTVIIATLGLMLTASRASLAQEIDMTALKCAEFVKSSRETV
                     TSIMLWLSGYYTYEDDLPVISASKISNKENQLKQYCADHPALPLLEASEIFMDKKYNK
                     DK"
BASE COUNT          972 a         1191 c         1046 g          935 t
ORIGIN      
        1 ttggatagcc ctggcgctcc aaatgcgtgg ccgcctttcc ctccgcatgg ggatgcgtct
       61 gcacaacaaa ccatgacgac gctgccgtat tcatgcgccc ccacacaaat cgctgggtcg
      121 cacgcccaaa agcgcgggca ccagaacgcg ttcgaagcca aatttcgtga ccgccgcttg
      181 tgctgaggta cgggcggagc gcatgtcggt gatcagcaga gcatcaggcg gcggcgctat
      241 gagatcgata tcgctaacga cgagtgcacc tgcaaatcgc ggcgattcca gctcaggatc
      301 cacgactgca gagacaatga acccgccgtc caaagcacaa atcgcggcaa tctccgcaag
      361 gtcggaagcc ccaagcaggg cgatccgcga gtagccgcgc tcacgagccg cctgcagcgc
      421 ggccgtgcag tcggtcttcg cccgccggaa tagcgcgaaa gagtaggaca taaactcgag
      481 ggtgagccgg gttttttcgg caaatccgtg aggggtcagg tagtaggcgt atcgccgggc
      541 gggcgcctgg ctgaccttga caagcccttt cttgatgcaa cgcttgaggt aagcgttggc
      601 aagcccaagt gcgacgccga gttccgatgc aagccgacgc tgcgactgct cgccaccgcg
      661 ctccacatat tccagcaacc cgagaacgat ccgggtctgc tcaacatcga ttggctttga
      721 cgcctcagcc atcacccctg cctcccgaag gggcacagct atagcgttca tcttgtgaac
      781 gtcaagccat tcgttcactt tgtgaacaat gatttcagat tgtaaccatt tgtttggaca
      841 tcacaatcca aataagcgtc cggtagagct gtccgtctgc accgccaaat gcgttccgaa
      901 tgtcttgtca actaaatgcg ttccgatgtc ttgtcaattg tagtggctgt gcgtttcccc
      961 ttcccaccgc cgatgcctac ctcatcataa cagccggctt tcttggcgag gtttatccgt
     1021 ggcgatgggg cccaagccaa gtctcggggg ccgtgcaccc gacaatcagc agcaccataa
     1081 cgaagatgaa caggaacaat cccagtagtg cgactgccga cgatattccg acatatccca
     1141 gcgcgccgac aagtccgacg agcagaagct ggcagaggaa taagaatgac gcccccatcg
     1201 ggtatccgga cgttgttagt tgacccggct cgatctctaa acgctcggcc acggcattgt
     1261 cattcccctc acttgagggg gacgcgccgg atcgttgcgc aacgcgtggc gcaataacct
     1321 cagccgcgcg cgctcttggc gacctagcgt cgcagcgggg caatccaccg aatgcacacc
     1381 ttcgatcaca agtcggaaac gaagcggcct atcaagccga tgcccgcgta tgtggcgttg
     1441 ctgccaacaa ctgggcatcc ctcagtcttg cctttacatt acggagaatt ggctcggaaa
     1501 ttgggaagag cccgagatag acgggtcgac cgtaccgcag cgtcgaaccc agcacctcga
     1561 cctcgcaccc gatgcgccgg tagatacgca gcattgctgc atcgaagttc ccgagaatcg
     1621 attcgatacc ggctcttatg gccacctcgc ccaagccagc gatcaaagcg ccagagacag
     1681 aaagcagttc gtcccgatgc ccctcgatta gcaacctgtc atcgagacaa aacctggtac
     1741 attcccaaat cgttggggca ctgagatgca ctccgtccgg gagtgtatcg aaaaaattgt
     1801 cagcgagaac agtcggcccc gtcgtaggta acaggcgcaa gcagcccttg acttcccgtg
     1861 ccctctcgtc ggtacatatg atataaactg gcgtcatgtc gtcgtattta tcgcgctcct
     1921 ttccatttat cacctgaaca tcccatccca accggtcacg aaagacgcgc gctctcagtc
     1981 gaaacatttc atccatcaaa cctgaatact cgtgagcatt atgtgattca atcacaacaa
     2041 tcatgccgca cgctccttcg tcgccttaat tccctccgca gcttcaatct gctgatccgc
     2101 catggttttc atggtcgtag ccagacgagg ttaaggcaag gcgattgcgg ttacgccgtt
     2161 agtgatcaat tgacggaagg cgcagaactt aaaatagttt tttatttaac agttatttca
     2221 ccacataact gatataattg ctggtgaaat taagcatgaa ctactcgatc gttcgacaaa
     2281 gactgtaata accctatcga aacacgctct aaatgcactc tataaaatca gcagtccaag
     2341 ctttacggcc ttggtcaccg cttgagccga tgtaaccgag tccagcttgt aacgggctga
     2401 cttcaaataa tcgcgcgctg tgtgcgcgga aatatccaaa ataattgcga tctcgcatgt
     2461 atctttgccg cacgcaatcc agcgcaagca ttcgagttcc cgcaacgaaa ggtgcggccg
     2521 gtcctcaccg aatacttcat agatgactcg ccgatgaatc cggttcgcta tttcaataag
     2581 ggcgggcagg ctcgttttca caaatttggt ccattcgtct ttcgagcgtg aaaacgaaat
     2641 agaaaaaaga gcccgatgtc cgtacttgct ttgaagcgga attgaaagcc catggggtcc
     2701 gacgccatgc gccagagcgt cggtcagaaa ggacacttct tccgcgccct gaattttcaa
     2761 ctcgctccaa tcgaacggaa gggcgcgcct aaagccttcg cgaataacag ggtcgatgtc
     2821 gatatatccc atttgcaggt agcgcttgat ccaggcggcc ggataggtca agcggatgta
     2881 aggatcggcc gacgggctcg ctccgagctt cgacgagtgg tacacgatat ggtcgacgtc
     2941 caacagatcc cggagttcgg caatcatcat ttccatatcc ggtgtgttgt cgacgatcgc
     3001 gaatgctttc aagagcattt cttcgttggg cagactggta gccatgtact gatccgatct
     3061 atggcattct cctgtcgggc agcgcatatt ccgcacttgt gtacgctgag catagcggcc
     3121 cgcttcgatt gcccgccgac ctctgcagct taaccccaat acgcgccgcg agtaatcgca
     3181 gggaaccgcc cgagcagtgg catctgtcgg caggtgccaa gcttgctaaa aacgcggtcc
     3241 aaacgagaga atatggcccg acttcatatc tgattcttca cccgaggttc gactgaaatc
     3301 tgtgatgaaa gtgattgtaa ttttacgctg tggacagcat ctctgctcgc ttgtcgatcg
     3361 aggtcaagcg tcgattggtt tgtcagcgat atactagcgg gctccgatgc cccgatgcca
     3421 cgcattaacc cgggtcttga ggatgcttcg ggttaacttg cggcgtagcg agctccaagg
     3481 gcgagaagcc cgcctcaccg ctgatcgctg tcattcccat gcctcggagc cgtctcggcg
     3541 gggccgaacg cagggagaca gccatcagga tgggggtata ttatgagtgg agaaaaacta
     3601 ttttgatctg tggttctgat gcccgcggcg ataccaaccg tatcagccta aaaaacatca
     3661 tctatttatc tttattatac tttttgtcca tgaatatttc agatgcttct aaaagcggca
     3721 acgccggatg atcggcacaa tattgtttga gctgattttc tttgttactt atcttggacg
     3781 cactgataac tggcagatca tcttcgtatg tgtaatatcc actcaaccac agcatgatgc
     3841 tcgtcaccgt ttcccggctg cttttcacaa actcggcgca tttcaacgcc gtcatgtcga
     3901 tttcttgtgc aagacttgcc cgtgacgcag tcaacataag gccgagcgtc gcaataatta
     3961 ccgtcctcgc aaacatagcc gctccaaatt tgttggtggc cctatggcgc agaccgcact
     4021 ccggacgtaa ctacccctta tccataaatt ttttgttaca acgcacaatt taccgcaccg
     4081 aaatttgccg cgcaagtctc atcttacctc acggcatttc ggcgatcgcc tgcccgtcct
     4141 tgcg
//
LOCUS       DATILV010000082         4097 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_529960, whole genome shotgun sequence.
ACCESSION   DATILV010000082 DATILV010000000
VERSION     DATILV010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4097
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_529960"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..355)
                     /locus_tag="VLJ17_01840"
     CDS             complement(<1..355)
                     /locus_tag="VLJ17_01840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HSV21752.1"
                     /translation="MYSFNYHRATGLRQATNMLGKFADAKLLAGGQTLLPTMKQRLAS
                     PSDIIDLNKIEGMSTIEVKGRNLVIGAMTRHADVASSPVVQQAIPALAALAHMIGDPA
                     VRHRGTIGGSIANNDP"
     gene            complement(449..946)
                     /locus_tag="VLJ17_01845"
     CDS             complement(449..946)
                     /locus_tag="VLJ17_01845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018261277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HSV21753.1"
                     /translation="MPAVSLTVNGKAVKATVEPRTLLVQLLREQLRLTGTHVGCDTSQ
                     CGCCVVHVDGKAIKSCTMLALQAEGADVLTIEGLATADKLHPMQEAFRENHGLQCGFC
                     TPGMIMTAVDMVHRLGHELDERTIREELEGNICRCTGYHNIVKSIAAGAKAMRGDAHS
                     HQAAE"
     gene            1591..2349
                     /locus_tag="VLJ17_01850"
     CDS             1591..2349
                     /locus_tag="VLJ17_01850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein TolA"
                     /protein_id="HSV21754.1"
                     /translation="MVAPKLLARSGFAISFLGHVAALTVGLFFAGAHPFDSAPAEAIM
                     VDIISPYEIGQAAGAPETTSAFYTPTPAAAAELPPTPPPTLRPNPEDGTPQTPPPLQP
                     METGHLVQSLPPDPATQEPNIADMFGLPLALPDGRLGGGFDAPAIDRAKISVEKIATF
                     REHLRTCLSRPGSIAPTDKVRVVLRVLLKPDGMLAATPTLIEASASAKGPVLMESAIR
                     ALRACQPYAMLPANKYEEWKVLDLNFTPQDFTGG"
     gene            complement(2361..3314)
                     /locus_tag="VLJ17_01855"
     CDS             complement(2361..3314)
                     /locus_tag="VLJ17_01855"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSV21755.1"
                     /translation="MQTATSLWRFPAKMRYTGAMLRSSTLPLFHLYGDPPDDQAFDFI
                     HVETISSRSSIHDWTIRAHRHRNLFQILLIARGGGDMTFETQVIPFEAPTAIIVPATI
                     AHGFRFRPDATEGWVLTFTEDVARALGGGSGEAISGLRALAADPVVPLSGEAEVDRIS
                     RLCADLHEERFLAREGYRFAMRGYLALIAIAVARLAASRARSGAATLMPADPTVDALR
                     YLVEEHFRKERRLTFYAGKLAMTPDRLNDHVKRAAGVTAGHLIRQRVLTEAKRQLVFT
                     NQPIHEIAYDLTFADPSHFARFFRKQTGVTPQAFRDQGDSA"
     gene            complement(3320..3970)
                     /locus_tag="VLJ17_01860"
     CDS             complement(3320..3970)
                     /locus_tag="VLJ17_01860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21756.1"
                     /translation="MIAAGAAVFAWSQSVDTETRQISSELLDRFNSDEMWKARLTLER
                     YYYLLSGDKITPGDLAKLTEEYFRAFVYQKAVPIPGKLADRIKFGNDREKQEEFLRQV
                     DQSRRRVKNFYEDIIVFTEGRLITNAFREKVLKGRFYRNTGDFLECFWLPVELGQNAA
                     LYQGRKADNDKRACQLVDWYREKFPVAGRSTTPCVAYAARQPDFCVDPKAEPLTSE"
BASE COUNT          793 a         1274 c         1234 g          796 t
ORIGIN      
        1 tggggtcgtt gttggcgatc gaaccgccga tcgtgccccg atggcggacc gccggatcgc
       61 cgatcatatg ggcaagcgcc gccagcgccg ggatggcctg ctgcaccacc ggcgatgagg
      121 ctacgtccgc gtggcgcgtc atggcgccga tcaccagatt gcggcctttg acctcgattg
      181 tggacatccc ctcgatcttg ttgaggtcga tgatgtcgga gggcgaggca agacgctgtt
      241 tcatcgtggg cagcagtgtc tgtccaccgg ccaacagctt ggcatccgca aacttgccaa
      301 gcatgttcgt cgcctgccgc agcccggtgg cacgatgata gttgaaactg tacatccgac
      361 gtctccgtgg ccctccggcc ttccccgctg cgaggccggg gcaattcgtt ttagccgcgc
      421 tcctccccca ggggatgagg agcgcgcctt attcggctgc ctggtgcgaa tgggcgtcac
      481 ccctcatggc tttggcgccc gccgcgatcg acttgacgat gttgtggtag ccggtgcacc
      541 ggcagatatt gccttcgagc tcttcccgga tggtgcgctc gtcgagctcg tggccgagac
      601 gatgtaccat gtcgaccgcc gtcatgatca tgccgggtgt gcagaacccg cattgcagcc
      661 cgtggttctc gcggaatgcc tcctgcatag ggtgcagctt gtcggcagtg gcaagcccct
      721 cgatggtgag gacatctgct ccctcagcct gcagcgccag catagtgcaa gatttgatgg
      781 ccttgccatc gacatggacg acgcagcagc cgcattgcga ggtatcgcag cccacgtgcg
      841 ttccggtcag gcgcaactgc tcgcgcagca gctgcaccag gagggtgcgc ggctcgacgg
      901 tggccttgac ggctttgccg ttcacggtaa gcgaaacggc aggcatggca acctcctcat
      961 gtgaggatca aacaacctct atggccgaca aacgtgacgg caggaaaaca ggcaagtaac
     1021 ctaatcgact agccggatca agcggttgcc tctctgtcca ttggggaccg ggcaggaatg
     1081 tgcccgccac gccgcccggg gtcaagtgag tcgctggatg cgattccact caatgtgggc
     1141 gggcccctgg atggctgccc ggtcggggcg gtcatgctgt tcttggtcta ttcgcgggag
     1201 catcggccgg tttgctcgtg ctggcggcga acaactggct agcagcgatc accatctgcg
     1261 cttcggcagg cggattgggc acgctgcttt gttcgggcct acccgttgcg ggccgtgcga
     1321 tcgtccatcg gcgcattccc cgccatcgcg cctaattgcg caatgctcac gaagacatag
     1381 ccggcaatga tcgtgtcacg tgtgaggcat ctccttgttt ctcaggcaaa tgcccctgag
     1441 ggaaagcctg cgcgtgtgtc cccagagctc ccgcattgcg ggctggactt gacgccaggt
     1501 attccttcag caatcacgca gtgcggcaaa tgccccacgc cgggttaacg ccatagctgc
     1561 cggcacgggc atcgaacaac gttgaccagg atggttgcgc caaagctcct cgcgcgctcc
     1621 ggcttcgcga tatcgttcct cgggcatgtg gcggccctga cagtgggcct cttctttgcc
     1681 ggtgcgcatc cgttcgattc ggcgccggcc gaggcgatta tggtcgatat catctcaccg
     1741 tacgagatcg ggcaggccgc cggtgcgccg gaaacgacaa gtgcatttta tacccctaca
     1801 cccgctgcag cggcggagct gccgccaacg cccccaccga cgctccgccc aaatccagag
     1861 gacggtacgc cgcaaacccc gccaccattg caaccgatgg agacgggtca tttggtgcaa
     1921 tctctgccgc cggatcccgc gactcaagag cccaatatcg ccgatatgtt cgggcttccc
     1981 cttgcgctgc ccgacggtag actcggcggc ggcttcgatg ccccagcgat cgatcgtgcc
     2041 aagatctcag tcgaaaaaat cgcgacattc cgggaacact tgaggacctg cctgtcgcgg
     2101 ccgggatcga ttgcgccaac cgataaggtc agagtggtgc tgcgtgtgct cctcaagccg
     2161 gacggcatgc tggccgcgac gccgacattg atcgaagcta gcgcttccgc aaaggggccg
     2221 gtgctgatgg aaagcgcgat ccgtgccctg cgagcatgcc agccctacgc catgctgcca
     2281 gcgaacaaat acgaggagtg gaaagtactc gacctcaact tcacgccaca agatttcacc
     2341 ggcggataac gggtcttgcc tcacgcgctg tccccctggt cacgaaacgc ctgcggggtg
     2401 acgccggtct gcttgcggaa aaagcgggcg aaatgtgaag gatcggcaaa ggtaagatcg
     2461 taagcaatct cgtggatcgg ctgattggtg aagacgagtt ggcgcttcgc ctcggttagc
     2521 acacgctgac ggatgagatg gccggcggta acgccagcgg cgcgtttgac atgatcgttg
     2581 aggcggtccg gcgtcatggc aagtttgcca gcatagaagg tcaggcggcg ctccttgcgg
     2641 aagtgctcct cgaccaagta gcgcagcgca tcgaccgtcg ggtcggccgg catcagcgtc
     2701 gcggcaccgc tgcgggcccg gctcgcggcc agccgcgcaa ccgcgatagc gataagagca
     2761 agatagccac gcatggcgaa acggtagccc tcgcgggcga gaaaacgctc ttcatggaga
     2821 tcagcgcata gccggctgat ccgatccacc tcggcttcgc ccgacaacgg caccaccgga
     2881 tcggcggcga gggcacgcag acctgagatc gcctcgcccg agccgccgcc aagcgctcgc
     2941 gcgacatctt cagtgaaagt cagcacccag ccctcggtcg cgtccgggcg aaagcggaag
     3001 ccgtgggcga tggtagccgg cacgatgatg gcggtcggtg cctcaaacgg gatcacctgc
     3061 gtctcgaagg tcatgtcgcc tccgccccgc gcgatcaaca ggatttgaaa cagatttcgg
     3121 tggcgatgcg cccggatcgt ccaatcgtgg atcgatgagc gcgaggaaat ggtttcgacg
     3181 tggatgaagt cgaacgcctg atcgtccggc ggatcgccat agagatggaa caacggcagg
     3241 gtcgaactgc gcagcatggc gccagtgtag cgcattttcg ccggaaagcg ccaaagtgat
     3301 gtggctgtct gcactcaccc tattccgacg tcagcggctc agcttttgga tctacacaaa
     3361 aatccggctg acgcgcggca tatgcgacgc agggagtggt agaccgaccc gccacaggaa
     3421 acttttctcg gtaccaatcc accaactggc atgcccgctt gtcgttgtca gctttgcggc
     3481 cttgatacag cgcagcgttt tgccctaatt cgaccggaag ccaaaagcac tccaggaaat
     3541 cacccgtatt gcgatagaaa cgccccttga ggaccttctc cctgaatgcg ttggtgatca
     3601 gcctcccttc ggtaaacacg atgatatcct catagaaatt ctttactctg cgtcggcttt
     3661 gatcgacttg ccgcaagaac tcctcttgct tttctctatc attgccgaat ttgatgcggt
     3721 ctgccaattt gccgggtatg ggcacagctt tttgataaac aaaagccctg aaatactcct
     3781 cagtcagctt ggcgagatcg cccggcgtga tcttgtcgcc cgacagaaga taataataac
     3841 gctccagggt cagccttgct ttccacatct cgtcggaatt gaaccggtca agcagttcgc
     3901 tcgatatctg ccgcgtctcg gtgtcgacgg attgactcca agcaaacact gctgccccag
     3961 ccgcgatcac cgcagccagt gcagtcgcgg cctcccaccg catcaaattg cggagaaaac
     4021 ctgccgccgc tcctatcatg gccgcggtct tccaccacgc agtcttcgaa tgggctgaca
     4081 tccagcggat ggcacct
//
LOCUS       DATILV010000083        12867 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2575445, whole genome shotgun sequence.
ACCESSION   DATILV010000083 DATILV010000000
VERSION     DATILV010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 12867)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12867)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12867
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2575445"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..219)
                     /locus_tag="VLJ17_01865"
     CDS             complement(<1..219)
                     /locus_tag="VLJ17_01865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21757.1"
                     /translation="MSGMRSEVFIALVVSIASCLGAEAADVNVPLKAPMTAPPGFDWS
                     GFYVGGHAGLARVERHTDNFDSTGAFTGS"
     gene            complement(706..3921)
                     /locus_tag="VLJ17_01870"
     CDS             complement(706..3921)
                     /locus_tag="VLJ17_01870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSV21758.1"
                     /translation="MNISETCIRRPVMTTLITASLIVFGIFGYRLLSVAALPAVDFPT
                     IQITATLPGASPETMGASVAGPIERQLSTIAGITSMTSVSSLGLATIVIQFDLNRNID
                     GAALDVQTALTVAARKLPIEMTVPPYFRKVNPGDSPIIMFSLVSATLPLSAVDDYGQI
                     TLAQQISQLPGIAQVQVFGSQKFAVRVQVDPLAAASRGIALDDVRTFVTKTNSNTPVG
                     TVAGAKQNTILTATAAMRNAAEYRELVAAYRNGQPVKLKDIASVVDGVENDKTANFFN
                     DERSIVLAVFKQPSANTVEIIDSIYARLPTYRAQIPAAVKMELLADRSVSIRDSVEDV
                     KMTLGIAVSLVVLVIFLFLRSATATAIPALAVPISLIATCAAMYLFGYSINNMTLLAL
                     TLSVGFVVDDAIVMLENIVRHIEGGMRPFEAALKGSREIGFTIISITLALIAVFIPVL
                     LMGGMVGRVFREFAVTITVAIVLSGFVSLTLTPMLCARVLKEHHEGERQNFVLRIFEA
                     IFKSWLRGYEVTLDVFLKYKSIVLVAMIGTLIGTVWLYIVIPKGFFPVEDTGFIQATT
                     EGPSDISFQAMFDRQMEIAAIMRKDPAVDYINATVGAGGPNPTNNYGRFFIALKPRHE
                     RNENSTAVIQRLRASTNTVTGMATYYQNVQNINITGRISKSEFQYTLQSSDTETLYRV
                     GPEMLEKVSKLPGLRDVTGDLYVKNPQMTMQIDREAAAVYGVSIDQVRQELYNCFGAR
                     QVATIYTDSNDYQVILECDKNIQVDTTGLSKIYLKTNLNGQPTGGGLIAPASGSGING
                     STTPTGPVIPLSAVTKLVPTVGALQVNHQGQQPSMTISFNLAPGYALGAAVDDIRQIE
                     RETNLPASIVSGFQGAAQVFQDSLKGQGVLVLAAVFASFVVLGILYESFIHPITIISG
                     LPSAGVGALIVLIMFKMDLTVIAMIGIVMLVGIVKKNAIMMIDFALQRRAVGLAAEEA
                     IREACLLRFRPIMMTSLAAIFGALPIALGAGAGAELRQPLGVAVVGGLLVSQLLTLYI
                     TPVVYIYLDKVDRMLRRRLEPPEDSSQEHELAHRPHAVAAE"
     gene            complement(3923..5101)
                     /locus_tag="VLJ17_01875"
     CDS             complement(3923..5101)
                     /locus_tag="VLJ17_01875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSV21759.1"
                     /translation="MTRSKALVGLLVVAVAGGAAASGIFGTEQLANWIPPLKWLTGDK
                     AVAQSPQGRPGPRAVAVEVSQAVKKKTPVVLESLGNVTTMASVAVKPRIDSEIVGVHF
                     SDGAFVKRGDLLVTLDSRALEAQIAQAEGTLERDQAQLDGAERDFRRYTELVAKGATP
                     ILSLENAKTQADTFRAAIKADAAALENLKVQLSYCSIRAPISGRISQAAVKVGNFVRQ
                     ADTVPIATINQLAPIYVTFTVAQRVLPELRVAMAETGALVDVVVPGEKRHARGNVAMI
                     ENAIDATTGMATVRANIPNVDELLWPGTLVSVQVTLRTEDAVVVPTLAVQVSQQGNFV
                     YVVKDNVATVTPVKVARLLGEETVIESGLSDGDVVVTDGHLLLVNGVRVTVREHKAGA
                     "
     gene            5453..6235
                     /gene="xth"
                     /locus_tag="VLJ17_01880"
     CDS             5453..6235
                     /gene="xth"
                     /locus_tag="VLJ17_01880"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008311 - double-stranded DNA 3'-5' DNA
                     exonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HSV21760.1"
                     /translation="MLIATWNINSIKQRLDNVLTWLKERQPDVVCLQETKCVDEAFPR
                     EAIEALGYNVAVHGQRAFNGVAVLSKLRFDEVTPRLLGDEEDDHARFLEVVLSKNSRS
                     LRIASIYLPNGNPPETDKYIYKLRWMDRLSRYADARLRLEEPLLLAGDYNVIPAPMDA
                     HNPAAWAGDALFLPQTRAKFGALLNLGLTEAVRATTDADGIYTFWDYQAGAWQKNAGI
                     RIDHLLLSPQAADLLAAAGIDKHVRGWEKPSDHVPVWVELNL"
     gene            complement(6255..7121)
                     /locus_tag="VLJ17_01885"
     CDS             complement(6255..7121)
                     /locus_tag="VLJ17_01885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV21761.1"
                     /translation="MRISEHILSVALFSAGLGLATAYAFDGTRSPADVAPAVGVEVAP
                     ETVPGVGVGRITPFQAFQKGARALRAGDTKTGLDALEFAARNGDIPALWKLGRMYADG
                     EGVKQSDLRAFEYFRTLADSHADEIPGTAQARFVANAFVTLGGFYLAGIPNSDIKPDA
                     VHAREMFSYAAIYFGDSDAQYRLGRMYLDGQGTNKDLKQAVRWLFAAASKGQYQAQAV
                     FGALLFKGESSVPRQAALGLMWLILARDAAAPREGWITDLYNAALKQATEDERAVALV
                     HVERWIKGRRGE"
     gene            complement(7108..8832)
                     /gene="ilvD"
                     /locus_tag="VLJ17_01890"
     CDS             complement(7108..8832)
                     /gene="ilvD"
                     /locus_tag="VLJ17_01890"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004160 - dihydroxy-acid dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HSV21762.1"
                     /translation="MDAKTNLKSRLPSRHVTEGPARAPHRSYYYAMGLTGEQIHQPFV
                     GVASCWNEAAPCNISLMRQAQAVKKGVAAAGGTPREFCTITVTDGLAMGHDGMRSSLP
                     SREVIADSVELTIRGHCYDALVGIAGCDKSLPGMMMAMCRLNVPSIFIYGGSILPGTF
                     RGKPVTVQDVFEAVGKHSVGQMSDDDLDVLEQYACPSAGACGAQFTANTMATVSEAIG
                     LALPYSAGAPAPYEFRDQFCMTAGEKVLDLVKLNLRPRQIVTRKALENAAAVVAASGG
                     STNAALHLPAIAHECGIAFDLFDVAEVFKRTPYIADLKPAGRFVAKDLFEAGGVPLLM
                     KTLLDNGFMHGTCMTVTGCTLAENLKRVTWNSEQAVVRPADRPLTTTGGVVGLRGNLA
                     PEGAIVKVAGMDNLKFSGPARCFDGEEVCFEAVKNRKYQEGDVLVIRYEGPKGGPGMR
                     EMLATTAALYGQGTGGKVALITDGRFSGATRGFCVGHVGPEAAVGGPIALVRDGDIIA
                     IDADRGSLEVQLTDAELEKRRAAWQPRGSAFGSGYLWKYAQQVGSARHGAVTHPGGAA
                     EKACYADI"
     gene            8985..9602
                     /locus_tag="VLJ17_01895"
     CDS             8985..9602
                     /locus_tag="VLJ17_01895"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009797495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003905 - alkylbase DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HSV21763.1"
                     /translation="MLPVRKTSRFHQLTQLLRRRFLARSVHEVAPDLIGATFLVDGVG
                     GPIVEVEAYHHTDPAAHSYGGPTARNAVMFGPPGYVYVYRSYGIHWCANFVCEAEGSA
                     SAVLIRALMPTEGLAVMRRRRGVCDERLLCAGPGRLCQALAITDAHNGLAIDRAPFTL
                     FARTAPVEIVAGPRIGISKAVDLPWRYGLAGSRFLSRPFKPSRSS"
     gene            10199..10957
                     /locus_tag="VLJ17_01900"
     CDS             10199..10957
                     /locus_tag="VLJ17_01900"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HSV21764.1"
                     /translation="MNKRVLPAIALGFLALAAAPAPAAEINIISAGAVEPGVVAATDV
                     FRKETGTEVKIKFATAPAIRQRVGGGEAADVVIAPPAVIEELAKAGKLDGSGGAPVGR
                     VGVGVLVRRDAAKPDVSSADALRRALLDAESVVYNKASTGLYLEKLFERLGVETQVRA
                     KETRYADGAAVMEHVIHGKGKEIGFGAITEIRLYGDKGAQFVGPLPGDAQNYTSYAAA
                     PSAVPANRDGAAAFMKFLSTPAATAAFLAKGIEQ"
     gene            complement(10976..11665)
                     /locus_tag="VLJ17_01905"
     CDS             complement(10976..11665)
                     /locus_tag="VLJ17_01905"
                     /inference="COORDINATES: protein motif:HMM:NF020498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1906 domain-containing protein"
                     /protein_id="HSV21765.1"
                     /translation="MSLPGTVARAPQGIIGFDSATKINSAQAKQYFAKGFRFCVRYVS
                     RDNASRKNNEKKGTPDLSTKEARTILDSGMAIMAVQHVANPGWHPTAQLGRTYGQNAS
                     TYAADAGLPSGVNLWLDLEGIAQGTSHQDIVAYCNEWFDAATTSGYVPGVYVGFDVFL
                     SPDELFFDLKTKHYWRADGNIPDISHRGYQLFQHVQHPNTPSEFDRNVTKNDALGGSV
                     IWLTENSALIA"
     gene            11822..12118
                     /locus_tag="VLJ17_01910"
     CDS             11822..12118
                     /locus_tag="VLJ17_01910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21766.1"
                     /translation="MRGLMVLAALVVSSSVFGQECIRPEWGKCVSFPNGGSHSGMSIQ
                     KEKIQAEVTPGADICVVNEEEIGGYTFARFARNGVPWPNPDWAANVDDFCFFKK"
     gene            complement(12289..>12867)
                     /locus_tag="VLJ17_01915"
     CDS             complement(12289..>12867)
                     /locus_tag="VLJ17_01915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21767.1"
                     /translation="LNKRVAVIDADTGKMKRYWGAYGNKPDDTNLGPYDPKAPPAQQF
                     RNPVHCIERSVDDLVYVCDRQNDRLQVFRPDGTFVKEHFYAKNTKGAGAVWDIVFSKD
                     PQQRFIMLADGQNERVRVIVRETLEEITSFGDGGRQPGQFYGVHSLASDSKGNLYTTE
                     TYEGKRVQKFNYKGIGSVPLGYQGVPWPRKTT"
BASE COUNT         2663 a         3903 c         3757 g         2544 t
ORIGIN      
        1 gctgccggtg aaagccccgg tactatcaaa gttatcggtg tgacgttcaa cccgtgccaa
       61 tccggcatga ccgccgacat aaaacccgct ccaatcaaag ccgggcggtg ccgtcattgg
      121 cgcctttaaa ggcacgttca cgtctgccgc ttcggctccc agacaagacg caatcgacac
      181 aaccaatgcg ataaaaactt cactacgcat accactcata taaacacctc cattaacgcc
      241 tacgatcaaa cgcctccgaa tctcgatttc ggttaaataa caccactcgc ccgccattaa
      301 tgagtcaatt gatggacagc gcttttttac ctctattggt tgaatcctac caggtgtggc
      361 aatgctgcaa cttaagaata ccttgtgtcc atttccagtg tggatgcacc cagggttgtt
      421 tctcgaaata agaagtgaga ccgcccccgc tgcggctcga tgcaagacaa gatctagcca
      481 taatagcggc aacccgaggc gcatggtgcg cgtgcgtgct tgtcaagcac gcacagacaa
      541 acctaatgac tgttcggccg catgctcacc gcgccggccg aaatcgaaga cattgcgctg
      601 ctgaccgccg aaccggtctt tcgccaattc gacgttgagg accttgggtg acggcacggg
      661 caccgaaggt gcgcggacgc cggttttgac cgaagcaagc ccttgttatt ccgccgcaac
      721 ggcgtggggt cggtgtgcga gttcgtgctc ttgcgaggaa tcctccggcg gctcgagacg
      781 acgccgcagc atgcggtcca ctttgtcgag gtagatataa accaccggcg tgatgtacag
      841 cgtcagcagc tgcgacacca ggaggccacc gaccacagcg acaccgagcg gctggcgcaa
      901 ctcggcaccg gcgccggcgc cgagcgcgat cggcaatgcg ccgaagatcg ccgccaagct
      961 cgtcatcatg atgggccgga accgcagcaa gcaagcttcg cgtatagcct cttcggccgc
     1021 aagtccgact gcacggcgct gcagcgcgaa gtcgatcatc atgatggcat tcttcttcac
     1081 gatgccaaca agcatcacaa tgccgatcat agcgatgacc gtgagatcca tcttgaacat
     1141 tatcaacacg atcagtgcgc cgacgcccgc tgatggtagg ccggagatga tcgtgatcgg
     1201 atggatgaag ctctcataca gaataccgag caccacaaag gaggcgaaca ccgctgcgag
     1261 taccagcacg ccctgccctt ttagggaatc ctggaacacc tgggcggcgc cctggaaccc
     1321 cgacacgatc gaggccggca gattggtctc ccgttcgatt tggcggatgt cgtcgacggc
     1381 ggcgcccagc gcgtagcctg gcgccaagtt gaacgaaatc gtcatagaag gctgctggcc
     1441 ctggtgattg acctgcagcg ctccaaccgt cggcaccagc ttagtgaccg cagacaacgg
     1501 gatcaccggc ccggtcggcg tggtggagcc attgatgccc gagcctgacg ccggcgcgat
     1561 caggccgccg cccgtcggct gcccgttgag gttggtcttt agatagattt tgctgagccc
     1621 ggtcgtgtca acctgaatgt tcttgtcgca ttccaggatc acttggtagt cgtttgaatc
     1681 cgtatagatc gtcgccacct gcctggcgcc gaaacagttg tacagttcct gacgcacctg
     1741 atcgatcgat accccgtaga ccgccgcggc ttcgcggtcg atttgcatcg tcatctgtgg
     1801 attcttgacg taaagatcgc cagtaacgtc acgcagtccc gggagcttgg agactttctc
     1861 cagcatttcc ggcccgacgc gataaagcgt ttccgtgtcg ctggattgca acgtatattg
     1921 gaattcgctc tttgaaatac ggcccgtgat attgatgttc tgcacgtttt ggtaataggt
     1981 cgccatgccg gtgaccgtat tggtactcgc ccgtaggcgc tgaatcaccg cggtcgagtt
     2041 ttcgttgcgc tcgtggcggg gcttgagggc aataaagaaa cgcccgtagt tgttggtcgg
     2101 gttggggcca ccagcgccca ccgtagcatt gatgtaatca accgccgggt ccttgcgcat
     2161 gatcgcggcg atttccatct ggcgatcgaa cattgcctgg aacgaaatgt cggacggtcc
     2221 ctccgtggtg gcttgaatga agccggtatc ctcgaccgga aaaaagccct ttggaatgac
     2281 aatatagagc cagacggttc cgatcagcgt gccgatcatc gccacaagga cgatggactt
     2341 gtatttgagg aacacgtcga gcgtcacttc gtagccgcgc agccacgact tgaatatcgc
     2401 ctcgaagata cgcaggacga aattttggcg ctcgccctcg tgatgctcct tgagcacccg
     2461 cgcgcatagc atcggcgtga gggtcaagga tacaaagcca gagaggacaa tggcgaccgt
     2521 gatggtcacg gcgaattcgc ggaacacccg cccgaccatg ccgcccatca gaagcaccgg
     2581 gatgaacacc gcgattagcg ctaaggtgat cgatataatg gtaaagccga tttcgcgcga
     2641 gcccttcagc gccgcctcga acggccgcat acccccttcg atatggcgga cgatattttc
     2701 cagcatcacg atggcgtcgt cgaccacgaa tccgaccgac agggtcagcg cgagcagcgt
     2761 catgttgttg atcgagtacc caaacaagta catggcggcg catgttgcaa tcagcgagat
     2821 tggcaccgct aacgccggaa tcgcggtggc agtcgcggaa cgcaggaata agaaaatcac
     2881 cagcacgacc aagctgaccg caatcccaag tgtcatcttc acgtcttcga cggagtcgcg
     2941 aatcgacacc gaccgatcgg ccagcaattc catcttgacc gccgccggta tctgagcgcg
     3001 gtaggtcgga agtcgcgcgt agatggagtc gatgatctcc accgtattgg cggacggctg
     3061 cttgaagact gctaaaacga tcgaacgttc gtcattgaag aaattggcag tcttgtcatt
     3121 ctcgacgcca tcgacgacgc tggcgatgtc cttgagcttg accggctgac cattgcgata
     3181 tgccgcgacc agctcacgat actctgcagc gttacgcatc gcggcagtcg ccgtcaggat
     3241 ggtattctgc ttggcccccg caacggtgcc gacaggtgta ttggaatttg tcttggtgac
     3301 aaacgtcctt acatcatcaa gcgcgatgcc gcgcgacgcg gccgcgagcg gatcgacttg
     3361 cacccgcacg gcaaatttct gcgagccgaa cacctgaacc tgcgcgatac cgggcaactg
     3421 cgaaatctgt tgcgccagcg tgatctggcc ataatcgtcg accgccgaca gcggcagcgt
     3481 cgccgacacc aggctgaaca tgatgatagg cgaatcgccc ggattgacct tgcggaagta
     3541 cggcggaacc gtcatttcga tcggaagctt gcgagccgcg acagtgagcg cggtctgaac
     3601 gtcaagtgcg gcgccatcga tattgcggtt gagatcgaat tgaatgacga tggtggcgag
     3661 gcccagcgag gacaccgagg tcatcgacgt gatcccggcg atggtcgaaa gctgccgctc
     3721 gatcggaccc gcaaccgagg cccccatcgt ctcggggctc gcacccggca atgtggcggt
     3781 gatctggatg gtggggaaat ccaccgccgg taacgctgcc accgacagca gccggtagcc
     3841 gaagatgcca aatacgatca atgacgccgt aatcagcgtc gtcatcactg gacgacgaat
     3901 acaggtttcg gagatgttca tgtcacgctc cggccttgtg ctcgcgcaca gtcacgcgta
     3961 ccccgttcac cagcagcaga tgtccgtcgg tcaccaccac gtcgccgtca ctcaggccgg
     4021 actcgatcac agtttcctcg ccgagcagcc gtgccacctt gacgggcgta acagtggcga
     4081 cgttgtcctt gaccacgtac acgaaattgc cctgctggct gacctgcacg gccaacgttg
     4141 gaacgacgac ggcatcctcg gttcgcagcg tgacctgcac ggagaccagc gtgccgggcc
     4201 acaacagctc gtccacattg ggaatgttgg cacgtaccgt tgccattccg gtggtggcgt
     4261 caatggcatt ttcgatcatc gcaacgttgc ctcgagcgtg gcgcttctcg cccggaacca
     4321 ccacgtcgac caacgcaccg gtctccgcca ttgcgacacg caactcgggc aagacgcgtt
     4381 gcgccaccgt aaacgtcaca taaatcggcg ccaattgatt gatggtggcg atgggcaccg
     4441 tatcggcctg gcgcacgaaa ttgccgacct tgacggcggc ctggctgatc cgaccgctga
     4501 tgggggccct gatgctgcaa tagctcagct ggaccttgag attttccagc gctgcggcgt
     4561 ccgcttttat ggcggcacgg aaggtgtcgg cctgcgtctt ggcgttttcc aaactgagta
     4621 tcggagtcgc gcccttcgca accagctcgg tgtaacgacg gaaatcacgt tccgcgccgt
     4681 caagctgcgc ctgatcacgc tcgagtgtgc cttccgcctg ggcgatttgc gcctcaagcg
     4741 cgcggctgtc gagggtaacg agcagatctc ctcgcttcac gaaggcgcca tcagaaaagt
     4801 ggacgcccac gatctcgctg tcgatgcgcg gcttgaccgc aacgctcgcc atcgtggtga
     4861 cattaccaag cgattccaga acaaccggcg ttttcttttt aacggcctgg ctgacctcca
     4921 ccgcgaccgc gcgcggtccc ggtcggcctt gaggcgactg ggcgaccgcc ttgtcgccag
     4981 tcaaccattt gaggggcgga atccaattgg ccagctgttc agtgccgaaa attccagatg
     5041 ctgctgcccc acccgccacc gcgaccacca acaatccgac taaggctttg cttctggtca
     5101 ttttgcgcgt cccgccgcag cgcgtaactg ccgtgcggag ttccctggct agcgttcact
     5161 cccgccgaag attcgatacc gtgcgatgca caacggtcgt tcgataggta atcgtaatcg
     5221 ccggcaatga attttgttac tttaggtaac acattctgcc tctttttgca ccccgcgaaa
     5281 tgacatggcc gcataaaatt acggatatgc cggcataaat ttacggatat actgcactgc
     5341 actggtgcgt ctctgtcgcc atcaccgtca gtcaatgttt gttggaaccc aaggtcgcgt
     5401 cgatacacac ctcagtcact ggcgactgct tcgagcccgt cggaagagtg caatgctgat
     5461 agcgacctgg aacatcaatt cgatcaagca acgcctggac aatgtcctga cctggctgaa
     5521 ggaacgtcag cctgacgtgg tctgcctgca ggagaccaaa tgcgttgacg aggccttccc
     5581 ccgcgaagcc attgaagcgc tgggctacaa tgttgcggtg cacgggcaaa gggcatttaa
     5641 tggggtcgcg gtgctctcca agttgcgttt cgacgaggtg accccgcggc tgcttggcga
     5701 tgaggaagac gaccacgcgc gctttctaga agttgttcta tctaaaaatt cgcgttcatt
     5761 gcgcattgcg tcgatctacc ttcccaacgg aaatcctccc gagaccgaca aatatatcta
     5821 taaactccga tggatggatc ggctttcccg ttatgcggat gcccggctgc ggctggagga
     5881 gccgctactc ctggctggcg actacaacgt gatcccggcg ccgatggatg cccacaaccc
     5941 ggctgcgtgg gctggcgacg cgctgttctt gccgcagacc cgtgcgaaat ttggcgccct
     6001 gttaaatctt ggcctcaccg aggccgtacg ggccaccacc gacgccgacg ggatctatac
     6061 gttttgggac taccaggccg gtgcgtggca gaagaacgcg ggcatccgga tcgaccattt
     6121 actgctgtcg ccccaggctg cggatctcct ggctgcagca ggcatcgaca agcacgtccg
     6181 cggctgggaa aagccgtccg accatgtgcc tgtctgggtc gaactcaatt tgtagatttg
     6241 tagaagatcg cgccttactc tcctcggcgg cccttgatcc agcgctccac gtgcaccaac
     6301 gccaccgcac gctcgtcttc cgtggcctgc ttcaaggcgg cgttgtacaa atccgtgatc
     6361 catccctcgc gaggcgccgc cgcatcccgt gcaagtatca gccacatcag gcccagcgcg
     6421 gcttgacgtg gtaccgatga ttcgccctta aataacaggg caccaaacac cgcctgagcc
     6481 tgatattgac ctttgctggc tgcggcgaac agccatcgca ctgcctgctt aagatccttg
     6541 ttggtgccct ggccgtccag atacatgcgg cccagacgat actgggcatc ggaatcgcca
     6601 aaatagattg ctgcgtacga aaacatctcg cgggcgtgga cggcatcggg cttgatgtcg
     6661 gaattgggga tgccggcaag ataaaagcca ccgagggtca cgaaggcgtt agcgacaaag
     6721 cgggcttgag cggtgcccgg aatttcatcc gcatgggaat ccgcgagggt acggaaatat
     6781 tcaaacgcac gcagatcgct ctgcttgacg ccctcgccat cggcatacat gcgacccaac
     6841 ttccacagcg ccggaatatc gccgttgcga gccgcaaatt ccagcgcatc cagtccggtt
     6901 ttggtgtcgc cggcccgcag cgcccgagcg cctttttgga aagcctggaa cggggttata
     6961 cgcccgacgc ctacgccggg caccgtctct ggcgcaactt ctacgcccac cgcaggagcg
     7021 acgtccgcgg ggcttcgggt gccgtcaaac gcgtaggctg tggccaaccc gaggcccgcg
     7081 ctgaacaacg ccaccgacaa aatatgctca gatatccgca tagcacgcct tctcggccgc
     7141 cccgcccggg tgcgtgacag cgccgtggcg cgctgacccg acctgctggg catatttcca
     7201 gaggtacccc gacccaaacg ccgatccccg cggttgccac gccgcccggc gtttctctaa
     7261 ctccgcatca gtcaactgaa cttcgaggct accgcgatcc gcatcgatcg cgatgatgtc
     7321 gccgtcacgc acgagcgcaa tcggtccgcc aacagccgcc tccgggccca catgaccgac
     7381 acagaaacct cgcgtggcgc cggagaatcg gccgtcagta atcaaagcaa ctttgccgcc
     7441 ggtaccctga ccgtagagtg cggccgtggt ggcaagcatt tcacgcatgc cggggccacc
     7501 tttggggcct tcgtaacgaa tgaccaggac gtcgccttcc tggtatttcc ggttcttgac
     7561 ggcttcaaag caaacttcct cgccgtcgaa gcaacgtgca ggaccggaga atttcagatt
     7621 gtccattccg gccactttga cgatggcgcc ctccggcgcg agattgccgc gcaacccaac
     7681 aacgccaccg gtagtggtca acggccggtc ggccggacga acgacggcct gctcggaatt
     7741 ccaggtcacg cgtttcaggt tttcggccaa agtacacccg gtcacggtca tgcaagtgcc
     7801 gtgcatgaaa ccattgtcaa gcaaggtctt catcagcaat ggaacgccgc cagcttcaaa
     7861 taaatctttg gcgacaaaac ggccggccgg tttcaaatct gcgatgtaag gtgttcgttt
     7921 aaagacttcc gccacgtcaa agagatcgaa cgcgattcca cattcatgtg cgatggcggg
     7981 aagatgcagt gcagcattcg tagagccgcc ggacgccgcc accacggccg cagcattttc
     8041 caacgccttt cgggtgacga tctggcgtgg gcgcaaattc aacttgacca agtcgaggac
     8101 tttttcgccg gccgtcatgc agaactggtc gcggaattca taaggcgccg gtgcgcctgc
     8161 cgaatagggg agcgcgaggc cgattgcctc cgacacggtc gccattgtgt tggcggtgaa
     8221 ctgcgctccg caggcgccgg cggacgggca agcgtactgt tcaagaacat cgaggtcatc
     8281 atcggacatc tgaccgacgg agtgcttgcc aactgcctcg aatacgtcct ggacggtgac
     8341 cggcttgccc cggaaggtac ccggaaggat cgacccgccg taaatgaaga tcgacggcac
     8401 gttgagtcgg cacatcgcca tcatcatgcc gggcaatgac ttgtcgcaac ccgcgatccc
     8461 caccaaggca tcgtagcagt gcccccgtat ggtgagttca accgaatctg cgatcacttc
     8521 acgcgacggt agcgacgacc gcatgccgtc gtgccccatc gcgagaccgt cggtgaccgt
     8581 gatggtgcag aactcgcgcg gcgttccgcc cgccgccgct acgcccttct tgaccgcctg
     8641 ggcttggcgc atcagcgata tgttgcatgg cgccgcctcg ttccagcagc ttgcaacccc
     8701 gacgaaaggc tgatgaatct gttcgccggt cagccccatc gcgtagtaat aggagcggtg
     8761 cggcgcacgt gctggccctt cagtcacatg ccgactggga agcctgctct taaggttggt
     8821 tttggcgtcc ataaaattgc accgcaccta aaatgcgcgc caaacaggca tcacacctac
     8881 gcaccggaac gttgtacatg gaaatcatgg actcctgtgg cggaaaaggg gcgatcaaag
     8941 gtcagagtaa caaatcttgt aaacatgtga cgtaaacgca acatatgttg cctgtccgaa
     9001 aaacgtcgag atttcaccaa ctaacgcaac tcctcaggcg gcggttcctg gcccggagcg
     9061 tccacgaggt ggcgccggac ctcatcggtg caacgtttct tgtcgacggt gtcgggggac
     9121 cgatcgtcga agtcgaggcc tatcatcata ccgacccggc ggcgcatagt tatggcggcc
     9181 cgaccgcgcg caatgccgtc atgtttggac cgcccggcta tgtgtacgtc tatcgctcct
     9241 acggcatcca ttggtgcgcc aatttcgtgt gcgaagctga aggcagcgcc agcgcggtgc
     9301 tcatccgcgc cctgatgccg acggaaggtc tcgccgttat gcgccgccgc cgcggcgtct
     9361 gcgacgagcg actgctgtgt gccggacccg gccggctgtg ccaggcactc gccatcactg
     9421 acgcgcataa tggactggcg atcgataggg ctccgtttac gttgtttgcc agaaccgccc
     9481 ccgtggaaat cgtggccggc ccgcggatcg gcatttccaa ggccgtcgat ctaccgtggc
     9541 gttatgggct cgcgggatcg cggtttttaa gccggccgtt caaacccagc cggtcatcct
     9601 gagcgatggt cacgcgcgag cctcacctcg aatccccatg tcatgggaag acccggggga
     9661 attccgatct acatattgtt cgagaacctc gccgacggca tctcgcgcga tgagagtttg
     9721 ggagtcctca agggttgagg atccgttgcg gcgattgcaa ttgcgatggc cagcgaaggc
     9781 gcaaaaaaat cgcacatgac aacgtgcata ttccgctgga ccgattgcgc cgttcggccg
     9841 ggcattcggg gacacatgaa acgttcccgg agccaatttt tgtttctcgc tgcggacgcc
     9901 gccgcgctcc cgaccgctgc gcgcatcgcg accgtgcaaa gctatccgac gcgaccaagc
     9961 tcggcgcctt gcgagagggt tgaggtcgaa gtggccgatt atcaaggagg ctggcatcaa
    10021 gctgaaagga tgaaaatctc aaccgaagaa aacctccttc gttgaaacct gactgcggct
    10081 attgcggcac ctcgcctctg cggcagtggc tcaatgcaat tgacgaaccg cctccccggc
    10141 gtattgtcgc caccgatcgt tcgacgattt cgccattgac agcacggagg ggacccggat
    10201 gaacaagcgc gtgcttcccg caatcgcact gggctttttg gcgctggccg ccgccccggc
    10261 tcccgccgct gagatcaaca ttatcagtgc tggcgcggtc gaacccggcg tcgtggcagc
    10321 gacggacgtg ttccgcaagg agaccggcac cgaggttaag atcaaatttg caaccgcccc
    10381 ggcgatccgg cagcgggtcg ggggcggcga agccgccgat gtggtgatcg cgccgcctgc
    10441 cgtcatcgag gaactggcaa aggccggcaa gctcgacgga tcggggggcg ctccggttgg
    10501 acgggtcggg gtcggggtgc tggtccgccg tgatgcggcg aagcccgatg tatcgtccgc
    10561 cgatgcgcta aggcgcgctt tgctcgacgc cgaatcggtc gtctataaca aggcgtcgac
    10621 cggcctctat cttgaaaagc tattcgagcg cctcggcgtt gaaacgcagg tcagagccaa
    10681 ggagacacgc tatgcggacg gcgccgccgt aatggagcac gtcatacacg gcaagggcaa
    10741 ggagatcggc ttcggcgcca tcacggagat cagactctat ggtgacaagg gcgcgcaatt
    10801 cgtcgggccg ctgccgggcg atgcgcagaa ctacacgagc tatgcggccg cgccttcagc
    10861 cgtgcccgcg aaccgcgatg gcgcggcggc gttcatgaaa tttctcagca ctccggccgc
    10921 gacggctgcg tttctggcaa agggcatcga acagtagtcg aaccgatcag cccagtcagg
    10981 ctatcaacgc ggaattctcc gtcagccata ttaccgaacc gcccaaggcg tcatttttag
    11041 tgacgttgcg atcgaactcg cttggcgtat tgggatgttg aacgtgttga aacagttgat
    11101 agccgcggtg cgaaatgtcg ggaatattgc cgtcggcgcg ccaataatgc tttgtcttga
    11161 ggtcgaaaaa cagctcgtcg ggcgacaaga agacgtcgaa acccacatat acgccgggca
    11221 cataaccaga cgtcgtcgcc gcgtcaaacc attcgttgca atacgcgaca atgtcctgat
    11281 gagaggtgcc ttgcgcaatg ccctcaagat cgagccaaag attgaccccg cttggaagcc
    11341 cggcatcggc cgcatatgtg gatgcattct ggccgtaagt tcggccgagc tgcgcggtcg
    11401 gatgccaccc gggattggcc acatgctgga cggccatgat cgccatgccg gagtccaaaa
    11461 tggtccgcgc ttccttggtc gagaggtcgg gcgtcccttt cttctcgttg ttcttgcggc
    11521 tggcattgtc tcggctgaca taccgcacgc aaaaccgaaa tcccttggcg aaatactgct
    11581 tggcctgggc cgaattgatt ttggtggcag agtcaaatcc gatgattcct tgcggggcac
    11641 gggcaacggt accgggcaaa ctcatagaca tctccaggtt gtcgcaacgg caaaggcaag
    11701 atttcccgtg tagatggtag catgcacgac tgcaagcccg ctcgggttgc tgcactcagt
    11761 gcgggcaagc tcccagccgt gttatgcccg gtgtcggact tcgccaaaca ggagaacgtg
    11821 aatgcgaggc ttgatggttt tggcggcctt ggtggtcagc tcaagcgtat tcggacagga
    11881 gtgcattcgg cccgaatggg gaaagtgcgt gtcgtttccg aacggcggat cgcacagcgg
    11941 catgtcgatc caaaaagaaa aaatccaagc agaagtcacg ccgggtgcag atatttgcgt
    12001 cgtcaacgag gaggaaatcg gcggctacac gtttgcacga tttgcacgca atggcgtccc
    12061 gtggccgaac ccggattggg ccgcaaacgt cgatgatttt tgttttttca aaaagtgatg
    12121 gtgctttctt ctcccgcccc ctcgggaagg tggcgcacag cgccgggtgc gtgactgtgc
    12181 catggaacaa gctctacccc cccgcgcgcg ccgaggacgg gagggaaacc caccttataa
    12241 agaaagcccc ggcaaacgcc ggggccgaga gtgctgcggc gctgatcgct atgtcgtctt
    12301 cctcggccac ggcacgccct gatagccgag cggtaccgag ccgatgccct tgtagttgaa
    12361 cttctgtacg cgcttaccct cgtaggtctc cgtggtgtat aggttcccct tcgaatccga
    12421 cgctaagctg tgcacgccgt agaactggcc cggctggcgt ccgccatcgc cgaacgaggt
    12481 gatttcctca agcgtctcgc gcacgatcac gcgcacccgc tcgttctgtc cgtcggccag
    12541 catgatgaag cgctgctgcg gatccttcga gaacacgata tcccacaccg cgccggcgcc
    12601 cttggtattc ttggcgtaaa agtgctcttt cacgaaggtg ccgtcgggcc ggaacacttg
    12661 caggcgatcg ttctgccggt cgcagacata gacgaggtcg tcgaccgagc gctcaatgca
    12721 gtgcaccgga ttgcggaact gttgcgccgg tggcgcctta ggatcatagg gtccaagatt
    12781 ggtgtcgtcg ggcttgttgc cgtaggcgcc ccagtagcgc ttcatcttgc cggtgtcggc
    12841 gtcgatcacc gcgacgcgct tgttgag
//
LOCUS       DATILV010000084         7175 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4874893, whole genome shotgun sequence.
ACCESSION   DATILV010000084 DATILV010000000
VERSION     DATILV010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7175
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4874893"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..198)
                     /gene="tssK"
                     /locus_tag="VLJ17_01920"
     CDS             complement(<1..198)
                     /gene="tssK"
                     /locus_tag="VLJ17_01920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018457628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssK"
                     /protein_id="HSV21768.1"
                     /translation="MSWYTKVAWTEGLFLRPHHFQQNDRYHEHLLESRVRFATPYPWG
                     FSYLEIDRDLAQQSKFALRRAA"
     gene            complement(261..1751)
                     /gene="tagH"
                     /locus_tag="VLJ17_01925"
     CDS             complement(261..1751)
                     /gene="tagH"
                     /locus_tag="VLJ17_01925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system-associated FHA domain
                     protein TagH"
                     /protein_id="HSV21769.1"
                     /translation="MGLTLTIENQTSLPDGGPLSVSIQGKRGIDIGRDQYLDWTLPDP
                     SRFISGKHCEVRWHDGGYWLHDISTNGTFLDGADSRLKQPHRLRNGDRFAVGHYIIVA
                     TVDDEGSEVGPKAALADSSPSYEDLWNPVGEVAPPIDPKQLKAPRDLRPVRPDFLDWA
                     IDVPNPDTSPPPAPPSGSPRSGRGPTSWDASPPPATDDWAQGTPRPPPPEPQVVPVPS
                     PRRPVWVSTEPEGPWASPPVPPAYPEAAANTLAAAQALAASAAGTPVPAEPPLYDRGA
                     EAPRREGARQTTSAGSAPIDAAHAAAMQDFVRLFARGAGLPEDILAARDPAELAEQLG
                     QLMRLITENMKQLLEARQTAKRLARSSNQTMVQALNNNPLKFAPSTEDALRIMFGPQT
                     RSYLDARRALTQSFDDLKSHQVRTFSAMQQALRLILGEFDPDVIENTSTGVRGLAAVV
                     GSRKARLWDIYVARWQARTQSHADGLLSAFMNYFADCYDHDEDRVR"
     gene            complement(1910..2461)
                     /locus_tag="VLJ17_01930"
     CDS             complement(1910..2461)
                     /locus_tag="VLJ17_01930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21770.1"
                     /translation="MSRVRFATARALYETFPEVSEKIGIAPTDQFPIDFLKELVSQGK
                     LDEAVAFCAYLLPRREAVWWACSCARTSLGEIPRDRGACLLAAEAWVYDPDDEHRKAA
                     LEIGTQGDSNDPLTWLALAAGWSGGLLVAFPSLPVPVPTYMTARAARIAVLLSAANAG
                     KDQRSDRLHGCIVDGMKLAETGL"
     gene            complement(2597..4498)
                     /gene="tssI"
                     /locus_tag="VLJ17_01935"
     CDS             complement(2597..4498)
                     /gene="tssI"
                     /locus_tag="VLJ17_01935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tip protein TssI/VgrG"
                     /protein_id="HSV21771.1"
                     /translation="MAGKLDQSECVAELKTPLGKDVLVLVRFDGTEGLGELFEYNIEA
                     LSEEENIDFDKAIGQSCTVKLNAFKGKERIYDGVLTEARWIGMRQDFFHYRLVLRPWL
                     WLLGHKADSRIFLDKNVKDIIQDVFTKAGFSDYEFRTSGDYDKIEYCVQYRETDLAFV
                     CRLMEQFGIYYFFEPSDGKHLLVLADSRSSHKPIPELSTVPYYPLIDKNLHMEQHLNE
                     WMWERRFRTGKVHFNDYDYLQPKKDLKAPKEASEKYQHSKLEVYDYPGKYDEKGKGEK
                     FAQYRLEAEQALDRRRYPNGHAPCLYPGGLVTVEKHPTQAENKEYLIIRSSHVFSSQY
                     YRSGGAEAGSDPDQNYYGHYEFLQSDRPFRNLPLTPKPRIYGIQTAKVVPKKGEDSEE
                     ISTDEHGRIWVQFFWDREPQKSCPIRVAEVHASKQWGGQFIPRVGMEVVVQFIEGDPD
                     RPLVTGCVYNGDNKHPYDLPSNKTQMGWKSDSSKGHSGYNEFMFEDKAGSELIRMHAE
                     KDHEVKIKHDDTWNIDNNRSVTIQQGNDSLELQMGNQTITLDMGSQTTTAMQGITLSV
                     SFGMSTIIINPASITLLSPTINLTAEAALNIQTPVFTVNAAATAFVGGPVGIAPGPLA
                     AFGAVIPPA"
     gene            4820..5884
                     /locus_tag="VLJ17_01940"
     CDS             4820..5884
                     /locus_tag="VLJ17_01940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21772.1"
                     /translation="MPTAYRDDVRALSAQHPFGVVLSFLGKFVVLIPARWSKSNYGDA
                     RLVDESIIRKALSGFRADFTVIDRLRRLVADSTSAANSASLLNGNQVMEAVTTAIVAG
                     HIYAVIAGTPANRVVHHAIDHPPAINYRTLAARYLWPNGAPGDVMREAGFFAFLLQHL
                     PNLCCDAYALMPGPGGEIVQLTDHGYQFLFDLGAERVVAAFGVTQYNPGRRDSARMAD
                     FLGQVTGTTQLQRIAGQAGSAQAAHDRVEKAKLTWRDRFFQTYGHKYDRGHFMSHRQG
                     GGLDINLFPQRADINQGRTGLGADYRAMEMACVARAGVAPVFCCSRPIYDDGSWVPAQ
                     LEYAVIYNPNRMNVRTFPNK"
     gene            5964..>7175
                     /locus_tag="VLJ17_01945"
     CDS             5964..>7175
                     /locus_tag="VLJ17_01945"
                     /inference="COORDINATES: protein motif:HMM:NF017026.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HSV21773.1"
                     /translation="MDELPIRIGTPAEFACVRSFFGGIQFNDRAVCAALKIRDIAGSR
                     NLRPGEIDWDSASPALRLAITLFVLGASAPREDFRKICGDEIFAAFTALGLVRDMRRC
                     DATIVCPVWLYPVDGFIVASDRRDDPDGEEYRPPADVVFPGLDAGTLRLLRLLPQMRG
                     GDALDLCGGCGIGALHLSRTAERAVSADITRRSSFFAAFNAGLNGVNIESLEGDLYAP
                     VMGRYFDVIAAHPPWVPSTGDAIVFRDGGDGGETIIRRIVEGIPRYLHQGGTAIIVSL
                     GRDTIEAPYERRARGWLGEGGRDCDVILGIEKMLTIEEVVGSVRKLHLNDDHRQADRL
                     AAHLRTLGTEKFIYGALFIRRTDELVAEPPLRLRMLSRAVAADFDRLLAWRRQRRTAA
                     FRDWMKLAKPRL"
BASE COUNT         1354 a         2123 c         2134 g         1564 t
ORIGIN      
        1 ggccgcgcgg cgcaatgcga atttgctttg ctgggcaagg tcgcggtcaa tttccagata
       61 agagaagccc cacggatagg gagtggcgaa acgcacgcgc gattcaagca gatgctcatg
      121 gtagcggtcg ttttgctgaa aatggtgggg ccgaaggaag aggccttccg tccacgccac
      181 cttggtgtac caggacataa gttgtctcta ttgttttcaa ctatggatat taggtcacgt
      241 ttttcgcaac cgccggcaac tcagcgtacc ctatcctcat catggtcgta acaatcggcg
      301 aaatagttca tgaaagcact gagcaagccg tccgcatggc tttgcgtgcg ggcttgccag
      361 cgcgccacat agatgtccca caaacgcgcc ttgcgcgatc cgaccaccgc ggccaagccg
      421 cgcacgccgg tgcttgtgtt ctcgatgaca tcggggtcga attcccccag tatcagcctc
      481 aaggcttgct gcatggcgga aaaagttctg acttgatggc tcttcaggtc atcgaagctc
      541 tgagtcaagg cgcgccgggc atccagatag cttcttgtct gcggcccgaa catgatgcgc
      601 agggcatctt cagtgctagg agcgaatttg agaggattgt tgttgagcgc ctggaccatc
      661 gtctggttcg agctgcgggc gaggcgcttg gccgtttggc gcgcttcgag gagttgcttc
      721 atgttctcgg tgatcagacg cattaattgg ccgagctgct cggcaagctc ggccggatcg
      781 cgcgccgcga ggatatcttc cggcaggccg gcgccgcgcg cgaacaggcg aacgaaatct
      841 tgcatcgccg cggcgtgcgc tgcgtcaatc ggggcggaac cggcggaagt cgtttggcgc
      901 gccccttcgc gcctcggcgc ctcggcgcct cgatcataaa gcggaggttc ggccggaacc
      961 ggggtaccgg ccgcagatgc tgcgagcgcc tgagcggccg caagcgtgtt cgccgcggcc
     1021 tccgggtagg ccggcggcac cggcggtgag gcccaagggc cttccggttc ggtcgatacc
     1081 cacacgggac ggcgcgggct cggcaccgga accacctgcg gttccggcgg aggcggcctc
     1141 ggggtgcctt gagcccaatc gtcggtcgca ggcggcggtg aagcatccca tgacgtcggt
     1201 ccgcgacccg atcgcggcga tccggatggc ggtgccggcg gcggcgaagt gtccgggttc
     1261 ggcacatcga tcgcccaatc gagaaaatcc ggacgaaccg gtcgtaggtc gcggggcgcc
     1321 ttgagctgct tagggtcgat gggcggcgcc acttcaccga ccggattcca caaatcctcg
     1381 tagcttggcg acgagtccgc aagcgcggct tttggcccga cctcggagcc ttcgtcatcg
     1441 acggtagcca caatgatata gtggccaacc gcgaagcgat cgccgttgcg caacctgtgc
     1501 ggttgcttca gtcgactgtc ggcgccgtcg aggaacgtac cattggttga tatgtcgtgc
     1561 agccaatatc cgccgtcgtg ccagcgcact tcgcaatgct tgccggagat gaaacggctc
     1621 gggtccggca aggtccagtc gaggtactga tcgcgtccga tatcgatgcc gcgcttaccc
     1681 tggatcgata cactcagggg accgccgtcc ggcaggctcg tttgattttc gattgtaagc
     1741 gtcaggccca tcggcggctt ctttgcagtc gactaacctc tgcggttgcc atatcggacc
     1801 ggacgataac ccaaagcttg gagcgaacgg ttgtccgcaa atacggttta ggtctagtcc
     1861 ggttatcatt caagccatac gggccctcaa cgatctatcc ccaatccagt catagcccgg
     1921 tttccgcaag cttcatgccg tccacgatac agccatgcag gcgatccgat cgctggtcct
     1981 tgcctgcgtt tgcggcgctc aacaagacag cgatgcgagc agcgcgggcc gtcatgtatg
     2041 tgggtaccgg aacgggtagg ctcgggaatg cgacaagcaa tccgccggac catccggcag
     2101 ccagagcgag ccacgtcagc ggatcgttgc tgtcgccttg ggtcccgatc tcgagcgccg
     2161 ccttcctgtg ttcgtcgtcg ggatcataga cccacgcctc ggcagcaaga aggcacgccc
     2221 cccggtctcg cgggatctcg cccaatgacg tccgggcgca actgcaagcc caccacaccg
     2281 cttcgcggcg cggcaacagg taagcgcaga acgccaccgc ttcgtcgagc ttgccctgcg
     2341 acaccagctc cttcaggaaa tcaatcggaa attgatcggt tggcgcgatg ccgatctttt
     2401 cggacacctc cggaaaggtc tcgtataggg ctcgagcagt ggcaaaacgg acacgggaca
     2461 tagaggaacc tcggatggaa ttggggcaat cagccgtaga ccgacgcccc aaacatggag
     2521 ccggcggggc gggccttcgc gccggcaacg cctgctagta ctactgaatc ataaagccac
     2581 cgggggctca gtcgtactag gccggcggta tgaccgctcc gaaggcggca agcggacccg
     2641 gcgcgatacc cacgggccct cccacgaatg cggtggcggc ggcgttgacc gtgaaaaccg
     2701 gggtctggat attgagcgcg gcctccgccg tcaggttgat ggtcggggac agtagcgtaa
     2761 ttgaggccgg gttgattatg atcgtgctca ttccgaagct caccgaaagc gttattccct
     2821 gcatcgcggt cgtggtctgg ctgcccatat cgagggtgat ggtctgattc cccatctgga
     2881 gttccaggct gtcattgccc tgttgaatag ttaccgatcg gttgttgtcg atgttccacg
     2941 tatcgtcgtg cttgatcttg acctcatggt ccttttcggc atgcatccga atgagctcag
     3001 agcccgcctt gtcctcgaac atgaactcgt tatagccgct gtgccccttt gaggagtccg
     3061 atttccagcc catctgggtc ttgttggagg gaagatcata ggggtgtttg ttgtcgccgt
     3121 tgtagacgca accggtcacc agcggccggt cggggtcgcc ttcgatgaat tggactacca
     3181 cctccatgcc gacgcgcggg atgaattgtc cgccccattg tttgctcgcg tgaacctcgg
     3241 cgacacggat cggacagctt ttctgtggct cgcggtccca aaagaattga acccagatcc
     3301 gtccatgctc gtcggtgctg atctcttcgc tgtcttcgcc cttcttgggc acaaccttgg
     3361 cggtctggat gccgtagatg cgcggcttcg gcgtcagcgg caagttacgg aagggccgat
     3421 cgctttgcag gaactcatag tgtccgtagt agttttggtc aggatcgctg ccggcttccg
     3481 cgccgccgct gcggtagtac tgggacgaaa acacgtgact ggaccgaata atcaggtatt
     3541 ccttattctc cgcctgcgtc ggatgctttt ccaccgtgac tagcccgccc ggatagaggc
     3601 acggcgcatg gccattgggg tatcgccgac ggtctagtgc ttgctccgcc tcaaggcgat
     3661 attgcgcaaa cttctcacct ttccccttct cgtcatattt gcccgggtag tcgtagactt
     3721 cgagcttgga atgctgatat ttttcggacg cctctttggg cgccttcaag tcctttttcg
     3781 gctgcagata atcatagtca ttgaagtgga ccttaccggt gcggaagcgg cgctcccaca
     3841 tccattcatt taggtgctgc tccatatgca agttcttgtc tatcaggggg tagtagggga
     3901 cggtggagag ttccggaatc ggcttgtgag atgaacgtga atctgccaac accagcaaat
     3961 gcttaccatc cgagggctca aagaaatagt agattccgaa ctgttccatc aaccggcaga
     4021 cgaaggccaa atcggtctcg cggtactgca cgcagtattc gatcttgtcg tagtcgccgc
     4081 tggtccggaa ttcgtagtcg ctaaagcccg ccttcgtgaa tacgtcctgg atgatgtcct
     4141 tgacgttttt atccaggaag atccgggaat ccgctttgtg cccaaggagc caaagccacg
     4201 gccgcaacac cagccgatag tggaaaaaat cctgcctcat gccgatccac cgtgcttccg
     4261 tgagcacgcc atcgtagatg cgttctttcc ccttaaaggc attgagcttg acggtgcatg
     4321 attggccgat cgccttatcg aaatcgatat tttcttcttc gctaagcgct tcaatattgt
     4381 attcgaacaa ctcgccaagc ccttcggtac cgtcgaaacg caccaggaca aggacgtcct
     4441 tgccaagcgg cgtctttagc tcggccacgc attcgctctg atcaagcttt ccggccatta
     4501 ataattcctc gcttcccgac gataatcggc cgatcgacga tatcgatacc tctcagcgta
     4561 gtcgagcggc tcgccgattc ggttcagatg ccgaccgaag gcgtcaattc acggccaatt
     4621 cgagccgtgt gacgacccgt taatatttga ttctcaacca cgcttgaact ccagccggga
     4681 cttctgtcac tatttcaaag agcataggct cgcaacgaac actcggagtc cgtcccggtc
     4741 ggtctctcct gtggctttac gctccagaca cttgcgatgc actcgctccg gggtaacggt
     4801 ttgagtaagc agggccaaca tgccaacagc gtaccgcgat gatgtccgtg ccctgtcggc
     4861 gcaacatcct tttggagttg tactgtcctt cctgggaaaa tttgttgttc taatcccggc
     4921 acggtggagt aaatccaatt atggcgacgc caggcttgtt gatgaaagca ttatccgcaa
     4981 agcactatct ggatttagag cggattttac cgtgatcgac agactaaggc gcctggtagc
     5041 ggacagcacg tctgcggcca atagcgcgag tcttctcaac ggcaaccagg tgatggaggc
     5101 cgtcacaaca gccatcgttg ccggtcacat ttatgcggtg atcgccggga ctcccgcaaa
     5161 ccgtgtcgtc catcacgcca ttgaccatcc tccggctatc aactacagga cacttgcagc
     5221 ccgttatctt tggccgaacg gcgcgcccgg cgacgtgatg cgagaggctg gtttcttcgc
     5281 gttcctgctc cagcatttgc caaacctttg ctgcgatgcc tacgcgctca tgccgggccc
     5341 tggcggtgag atcgttcagc tcaccgatca tggttatcaa tttcttttcg atctcggcgc
     5401 cgaacgcgtc gttgccgctt ttggggtcac gcaatacaac ccaggccgac gggattccgc
     5461 ccggatggcg gattttctcg gccaggtgac cggcaccaca caactgcaga ggatcgccgg
     5521 ccaagcaggg tccgcacaag ccgcgcacga tcgtgtggag aaggccaagt tgacgtggcg
     5581 tgaccgtttc tttcagactt acgggcacaa atacgatcgc ggacatttca tgagtcatcg
     5641 ccagggcggc gggctcgata tcaacctgtt tccgcaacgc gccgatatca atcagggccg
     5701 cacaggactc ggcgccgatt accgggccat ggaaatggcg tgcgtcgcta gagccggcgt
     5761 agcccccgtg ttttgttgct cgcgccccat ctacgatgac ggcagttggg ttccggcaca
     5821 acttgaatat gctgtgatct acaatccgaa tcggatgaat gtgcgtacct ttccgaacaa
     5881 ataggaaatt ggcggctacc ccggcgggtc aaccggcggg ccgaagcagc gtttttcggg
     5941 ccataactat gtcgaatcca tccttggacg agcttccgat tcgtatcggc acgccggccg
     6001 agttcgcgtg tgtccgcagc ttcttcggcg gtatacagtt caatgatcgc gcggtctgcg
     6061 ccgcgctgaa aatccgcgat atcgccggct cccgcaattt gcggccgggc gaaatcgatt
     6121 gggattcggc gtctccggcg ctgcgtcttg ccatcacgct gtttgtactc ggcgcttctg
     6181 cccctaggga agatttccgt aagatttgcg gcgacgagat tttcgcggcg ttcaccgccc
     6241 tcgggcttgt tcgtgatatg cggcgatgcg acgcgaccat tgtgtgcccg gtttggctgt
     6301 atccggtcga tggcttcatc gtcgcctccg atcggcgcga cgatccggac ggtgaagagt
     6361 atcgcccgcc cgccgatgtg gtgtttcctg gactggatgc cggtacattg cggctgctgc
     6421 ggctgttgcc acagatgcgc ggcggcgacg cgcttgatct ctgcggcgga tgtggcattg
     6481 gcgcgctgca tctttcccgc accgcagagc gggcggtttc cgcagatatc acgcgacgat
     6541 catcgttctt tgccgcgttc aacgccgggc tgaacggggt aaacatcgaa agtctcgagg
     6601 gcgatctata tgcccccgtg atgggccgat atttcgacgt catcgcggcc catccgcctt
     6661 gggtgccttc gaccggggat gccatagtgt ttcgggacgg cggcgatggt ggtgagacca
     6721 tcatccgtcg catcgttgaa ggaattccgc ggtatttgca tcagggtggc accgccatca
     6781 tcgtttcgct cgggcgagat acaatcgagg ccccctacga aaggcgcgct cgcggctggc
     6841 tcggcgaagg cgggcgggat tgcgacgtga tcctcggcat cgagaagatg ttgaccatcg
     6901 aggaggtcgt cggctcggtc cgcaagcttc acctcaacga cgaccatcgg caagcggatc
     6961 ggctcgctgc ccacctgcgc acgcttggca ccgaaaaatt catttacggc gccctgttca
     7021 tcaggcggac cgacgaactg gttgcagaac caccgctgcg cctgcgtatg ttgtcgcgcg
     7081 ccgtggcggc tgattttgat cgcctactcg catggcgaag gcagcgccga accgccgcct
     7141 tccgcgactg gatgaaattg gccaagccgc ggctt
//
LOCUS       DATILV010000085         4246 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_19611, whole genome shotgun sequence.
ACCESSION   DATILV010000085 DATILV010000000
VERSION     DATILV010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4246
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19611"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            82..1059
                     /locus_tag="VLJ17_01950"
     CDS             82..1059
                     /locus_tag="VLJ17_01950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV21774.1"
                     /translation="MKLPRRRFLHLVTGAAAMPAVSRFARAQTYPSRPVRLLIGFSAG
                     GGADIVGRLIGQWLQERLGQPVVIENRPGAGTNVATEALVRAPADGYTLGLIGLPNAI
                     NATLYDKLSFNFIRDVTPVAGILRTPEIMVVNLSVPAKTLSEFIAHAKANPGKINMGS
                     AGNGSVSHVAGELFMFKAGLRMVHVPYRGAAPALTDLLGGQVQIMFGAATATMPYIST
                     GKVRALAVTGTARSELLPDIPTVGELVPGYEASAWYGIGAPKGTPVEIVDRLNTAMNE
                     SLADPELKARLADLGATVLTGSSADLGKLIADETEKWAKVIEFAKIKAE"
     gene            1168..2721
                     /gene="tcuA"
                     /locus_tag="VLJ17_01955"
     CDS             1168..2721
                     /gene="tcuA"
                     /locus_tag="VLJ17_01955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent tricarballylate dehydrogenase
                     TcuA"
                     /protein_id="HSV21775.1"
                     /translation="MTSAELPGVAPDVLVVGAGNAALCAAISAHQNGARVLMLEAAPF
                     EERGGNSHFTGGAFRFAFAGVDDLLAVLPSLAQERLENVDFGTYTQDQFFDDLFALTQ
                     YRSDPDLLEILVRGSLDTAKWIAQQGVKLQPGLGRQAYQVDGKFKFWGGLALHIWGGG
                     PELLNALYANVERRGIPILYETPATSLIRENGRLAGVIAEHQGAPVAIRAGAVVLACG
                     SFESNPEMRAKYLGPGWEMARVRGTRFNMGAGLNMAMAIGARPYGHWSGSHSVAWDIN
                     APPYGDLTVGDQFQKHNYPFGILINAKGERYVDEGANFHSHTYAKYGGEIIKLPGMFA
                     WQVFDAKVSHLLRSEYRIRRVTKAEANTLEELAGKLDGVDPEGFLRTVREFNAACRVD
                     TPFNPNVLDGRRTQGLAINKTNWANPLDTPPFHAYHVTTGVTFTFGGLKISQKGEVED
                     LYGRIIPGLYAAGEMVGGLFFHNYASGTGLMSGATFGRLAGRSAAAFARPPASRAAQV
                     RHDAEGAAP"
     gene            2718..4124
                     /locus_tag="VLJ17_01960"
     CDS             2718..4124
                     /locus_tag="VLJ17_01960"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HSV21776.1"
                     /translation="MTIATELARRIRAFTYDGLPDAALEWAKTGILDTVGVTLAGSAE
                     PCAQIMLRVCTATGPALVFGSAQRLSVTDAALVNGTASHALDFDDCSNTLGGHPSVPI
                     LPGLFALADAMPVSGRDFLAAYVAGFETETRIARAVNFHHYDKGWHPTATLGIFGATA
                     AASRLLELTQDQTATALAIAASFSSGLKANFGTMTKPLHVGHCARNGVMAAMLARAGM
                     TASHDVFEHRQGFFNVFNGAGNYDADAVLRDWAEPLDIITPGIAIKSYPCCGSTHPAI
                     DAMLDLVRAHRLTPENVAHVVSWTHPRRLAHTNRPSLRSALDAKFSVQYCLARALVDG
                     QVVLSHFNDDAYLDARVADVMARIEAAPHPQMSSAGTAHFGAEVTVTTTDGRRLVKVV
                     DSALGRTSEQPLSRFALEAKYRDCAGRVLTPDAVDRSLDLVADMETLDRASVLADTLA
                     AGCACDQAGGPAALARAS"
BASE COUNT          753 a         1382 c         1360 g          751 t
ORIGIN      
        1 ccatgggcga gcagacataa aaaaaatcag acgtgcgtcg agcgaggcga tcaacgcccg
       61 cacagaattt tggaggacgc catgaaactt ccccgccgca gattcttgca tctggtcaca
      121 ggtgccgccg cgatgccggc cgtgtcgcgc tttgcgaggg cgcagactta tccgtcgcgt
      181 ccggtgcgct tgctcatagg cttttccgcc ggcggagggg ccgatatcgt cgggcgcctg
      241 atcggtcaat ggctgcaaga acggctgggc caacccgtcg tcattgagaa ccggcctggc
      301 gccgggacca acgttgccac cgaggcgctc gtacgcgcgc cggccgacgg ctatacgctc
      361 ggccttatcg gcctgccgaa cgcgatcaac gcgaccttgt acgacaagct cagcttcaat
      421 ttcatccgcg acgtgacgcc agtcgcaggc atcctgcgca cgcccgaaat catggtcgtc
      481 aatctgtcgg ttccggccaa aaccctttcc gagttcatcg cccacgccaa ggccaatccg
      541 ggcaagatca atatggggtc ggccggcaat gggagcgtgt cacatgtcgc cggcgagctg
      601 ttcatgttca aggccggcct cagaatggtg catgtgcctt atcgcggcgc ggcccccgcg
      661 ctcaccgacc tgctaggcgg ccaagtgcag atcatgttcg gggccgcgac cgcgacaatg
      721 ccctacatca gtacaggaaa ggtgcgtgcg ctggcggtca ccggcaccgc gcgctcagaa
      781 ctgttgccag acatcccaac cgtgggcgaa ttggtcccgg gctacgaggc gagcgcctgg
      841 tacggcatcg gggcgcccaa aggcacgccc gtcgagattg tcgatcggct caacacggcg
      901 atgaatgagt cgctcgccga tcccgaattg aaagcgcggc tcgcggacct gggcgccacc
      961 gtgctgactg gctcgtccgc cgacctcggc aagctcatcg ctgacgaaac cgagaaatgg
     1021 gcgaaggtga tcgagtttgc gaaaataaaa gcggagtgag cggcgcagac gttctaaaaa
     1081 tgccgttcgg cgaactcgtc cgtaggacca gggcaatgat cgaacgtttg aagcgccgtt
     1141 ttgtgatcct cgcattcggg aggaagcatg acatctgccg aactgccggg cgtggcgccg
     1201 gacgtgctgg tggtcggggc aggcaatgcg gccttgtgcg ccgcgatctc ggcgcaccag
     1261 aatggagcgc gcgtgctgat gctcgaggcc gcgccgttcg aggagcgcgg cggcaactca
     1321 cattttaccg gcggcgcctt ccggttcgcg ttcgcaggcg tcgacgatct cctcgctgtg
     1381 ctgccatcgc tggcgcagga gcgtctcgag aacgtcgact ttggaaccta cacgcaagac
     1441 cagttttttg acgacctttt cgcgttgacc caataccggt ccgacccgga tctcttggaa
     1501 attctcgtgc gcggcagtct ggacactgcc aaatggatcg cccagcaggg tgtgaagctg
     1561 cagccggggt tgggacggca ggcctaccag gtcgacggaa aattcaaatt ctggggcggt
     1621 ctcgcactgc acatctgggg cggcgggccg gagctcctca acgcgctcta tgccaatgtg
     1681 gagcggcgcg gcatcccgat tctctatgag acgcccgcca ccagtctcat ccgtgaaaac
     1741 gggcggctcg cgggcgtcat cgcggaacac caaggcgcgc cggtcgcgat ccgggccggc
     1801 gctgtggtgc tcgcctgcgg cagcttcgag tccaatccgg aaatgcgggc aaagtacctt
     1861 ggccccggtt gggaaatggc gcgggtgcgc ggtacgcgat tcaatatggg cgccgggctc
     1921 aacatggcga tggcgatcgg cgcaaggccc tacggccatt ggtccggttc ccattcggtg
     1981 gcgtgggaca tcaacgctcc gccctatggc gatctcacgg tcggtgatca gttccagaag
     2041 cacaactacc cgttcggcat tctgatcaac gccaagggcg agcgctacgt cgatgagggc
     2101 gccaactttc acagccatac ctatgcgaaa tatggcggcg agatcatcaa gcttccgggc
     2161 atgtttgcct ggcaggtgtt cgacgccaag gtgagccatc tgctgcgcag cgagtatcgc
     2221 atccgccggg tgaccaaggc ggaagccaac acgctcgaag aactggccgg caagctcgac
     2281 ggcgtggatc ccgagggttt ccttcgcacc gtgcgggaat tcaacgccgc ctgccgcgtc
     2341 gacactccgt tcaatcccaa tgtcctggat ggccgcagga cccaaggcct cgccatcaac
     2401 aagaccaatt gggccaatcc gctcgatact ccgccgttcc acgcctatca tgtgacgacc
     2461 ggcgtgacct ttacgttcgg cggcctcaag atttcccaga agggcgaggt cgaggatctt
     2521 tacggccgga ttattccagg cctctatgcg gcgggcgaaa tggtcggcgg gctgttcttc
     2581 cacaactatg ccagcgggac gggcctgatg tcgggcgcga cctttggccg gctggcggga
     2641 cgcagcgccg cggcgttcgc gcggccgccg gcctcgcgcg cagcgcaggt ccgccacgat
     2701 gctgaaggag ctgctccatg accattgcca ccgagctcgc gcggcgcatt cgcgccttca
     2761 cgtatgacgg cctgccggat gccgcgttgg aatgggcgaa gaccggcatt ctcgataccg
     2821 tgggggtcac gctcgccgga tctgccgagc cgtgcgccca gatcatgctg cgcgtgtgca
     2881 ccgccacggg cccggccctg gtgttcggct ccgcgcagcg cctgtcggtt acggacgcgg
     2941 cgctggtgaa tggcaccgcc tcccatgcgc tcgacttcga cgattgcagc aacacactcg
     3001 gcggccatcc ttcggtgccg atcctgccgg gcctgttcgc cttggccgac gcgatgccag
     3061 tcagcgggcg cgatttcctg gccgcctatg tggcgggctt cgagaccgaa acgcgcatcg
     3121 cccgcgccgt caacttccac cattacgaca agggctggca cccgaccgca acgctgggca
     3181 tattcggcgc caccgcagcg gcctcgcggc tcctcgagct gacgcaggat cagaccgcaa
     3241 ccgcgctcgc catcgcggct tcgttttcgt ccggcctcaa ggccaacttc ggcaccatga
     3301 ccaagccgct gcatgtgggt cactgcgccc gcaacggcgt gatggccgcg atgctcgcgc
     3361 gcgcgggtat gacggcgagc cacgatgtgt tcgagcaccg gcaaggcttt ttcaatgtct
     3421 tcaacggcgc cggcaactac gatgccgacg ccgtgctgcg cgactgggcg gaaccgctcg
     3481 acatcatcac gccgggcatc gccatcaaga gctatccgtg ttgcggcagc acccacccgg
     3541 ccatcgacgc catgctcgat ctggtgcgcg cgcatcgcct gacgcccgag aatgtcgctc
     3601 atgtggtgtc ctggacgcat ccgcgacgtc tcgcgcacac caaccgtccg agcctgcgca
     3661 gcgcgctcga tgcgaagttc agtgtgcaat actgcctggc ccgcgcgctg gtggacggcc
     3721 aagtggtgct gtcgcatttc aacgacgacg cttatctcga cgcgcgggtg gcggatgtga
     3781 tggcccgcat cgaagcggcg ccgcatccgc agatgtcatc cgccggcacc gcgcatttcg
     3841 gtgccgaggt gacggtcacg accaccgacg gacgacgctt ggtgaaggtg gtggacagcg
     3901 cgctcggacg cacgtcggaa cagccgctgt cccggtttgc cctcgaggca aagtatcgcg
     3961 attgcgccgg ccgtgtgctg acccctgacg cggtggaccg gtcgctcgat ctggtggcgg
     4021 acatggaaac gctcgaccgc gcgtccgtgc ttgccgacac actggccgcg ggatgcgcct
     4081 gcgatcaggc gggcggacct gccgccctgg cgcgggcaag ctgacagttt ctgacttcgg
     4141 tttgcgcacc atgaaaaact tacggagcac acggtcactc atcgcgagcc tcgcggcagc
     4201 gccgatcatg atggccgcgg cctgccacaa tgctgttcgc aatctg
//
LOCUS       DATILV010000086         4380 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1809301, whole genome shotgun sequence.
ACCESSION   DATILV010000086 DATILV010000000
VERSION     DATILV010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4380)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4380)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4380
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1809301"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..301
                     /locus_tag="VLJ17_01965"
     CDS             <1..301
                     /locus_tag="VLJ17_01965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HSV21777.1"
                     /translation="RRVLSCLNLALMHDGEEITTVEGLGTPDAMHPMQASFLACDAYQ
                     CGYCTSGQIMSAVALLQEPCGPDDASVKELMSGNICRCGAYANIVAAIQQVRKTA"
     gene            319..1320
                     /locus_tag="VLJ17_01970"
     CDS             319..1320
                     /locus_tag="VLJ17_01970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008839696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HSV21778.1"
                     /translation="MRIFEFIRPTDPAAAIAAAAQSKTAQQGADVRFMGGGTTLIDLM
                     KLNVETPDRVLDINRLPLDKIEATPDGGLKIGATVRNSDLAQHPKVEKDYLVLSQAIL
                     NGASAQIRNMATVGGNLLQRTRCVYFRDTAMSCNKREPGTGCPAITGHNRTLAILGTS
                     EHCIATNPSDMCVAMAALEATIHVQGPKGSRAIPFGDFHLLPANTPHRETVLEPGDLI
                     THVTLPPPVVGGKQLYLKLRDRASYEFALVSAAVVLTIAGGNITRARIALGGVGTKPW
                     RSPDAERALTGKTANEATFRQAAEAALRGAKPQSENGFKIELARRCLTYALRTAAAS"
     gene            1337..3595
                     /locus_tag="VLJ17_01975"
     CDS             1337..3595
                     /locus_tag="VLJ17_01975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HSV21779.1"
                     /translation="MATTHPSLATSPIGRDTPRVDGPRKVTGLAQYTSDFHFPEMLYA
                     VPVEATIANGKLLALDAAAAEKMVGVRAVFHRGNIGKIFRSTPAPGFDRICEERRPPF
                     EDDVIRYYGQYIALAVADTFEAAKAAADVVRATYAKEKPNVEARLEAGNDPDVVLTTY
                     GPVPRLQSKRGDPEGSFENAPVKLDETYVTPAETHNPLELHATIAIWDVDMLTLYDST
                     QGVVNARSVLAQMFGLPKENVRVISKFLGSGFGGKLYPWTHVPLAVAAARQLGKPVKL
                     VVSRKMMFQSVGHRAHTQQRVRLGANRDGKLVSLMHDYVYHMSILDDYHEDCGEATPF
                     HYSVPNLRVSFGRARRNIGAASDMRGPGAVPGLYATESAMNEMADRLKMDPVQLRILN
                     EPKLDESNGLPFSSRHYVECLNLGAEKFGWSKRNPTPGSMKRDGLTLGWGMAGAAWPA
                     ARLAAEANVQLRDDGTVRVASATQDIGTGTYTILAQLAAEKTGVPIDNVEVVLGDSSL
                     PDGPISGASMATESLIPAVFGAANEAIASLLIIAVTSPGSPFLGHKPDDLAFANGRVF
                     VKAEGPGKGVPFGDVLRRANVRLVSGAGKGEQTFFVPGQKFSTHSFGCHFVEVTWQPE
                     IARLRVSRVVTVMDAGRILNPLAGRNQIQGAVVMGIGMALFEETTYDPQNGAPINSNL
                     ADYMMTVNADAPPIDVTFLDHPDKEINELGARGIGEIGLAGIAAAITAAVHHATGVRV
                     RELPVKIENLLV"
     gene            3888..4322
                     /locus_tag="VLJ17_01980"
     CDS             3888..4322
                     /locus_tag="VLJ17_01980"
                     /inference="COORDINATES: protein motif:HMM:NF019590.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NIPSNAP family protein"
                     /protein_id="HSV21780.1"
                     /translation="MAKLSGIKAWSLLSFIGGAAVTLGVSNLGGSNTSHHVYELRLYH
                     VNEGKMNALKARFGDHTDAIFKRHNMKSIGYWVPEDPPYSQNLFVYILEHPSREEARK
                     NWSVFQNDPEWKKVKADSETQGPLVDHIDSYFMDPTSFSALK"
BASE COUNT          936 a         1282 c         1328 g          834 t
ORIGIN      
        1 caggcgagtg ctttcctgcc tcaacctggc cctgatgcac gatggagaag agatcacgac
       61 tgtggaaggc ctgggtacac ctgacgcaat gcatccgatg caggcgtcat tccttgcctg
      121 cgacgcttat cagtgcggct attgcacgtc cggccagatc atgtcggcgg tcgccctgct
      181 ccaggagccg tgcggtcccg atgacgcgtc ggtgaaggaa ctgatgagcg gcaacatctg
      241 ccgctgcggt gcttacgcca atatcgtggc cgcgatccaa caagttcgca aaaccgccta
      301 gcgagggagg gattttcgat gcgcatcttt gagttcatcc gaccgacgga tccggcagcg
      361 gccattgcgg ccgccgcgca atcgaaaacg gcccagcagg gcgcggacgt gcggttcatg
      421 ggcggaggca cgacgctgat cgatctgatg aagctgaacg tggagacgcc cgaccgtgtg
      481 ctcgacatca atcgcctccc gctcgacaag attgaggcga cgcctgatgg tggcctgaag
      541 atcggggcga cggtgcggaa ttccgatctc gcacagcacc cgaaggtgga gaaagattac
      601 ctggtgttgt cgcaggcgat tctgaacggc gcctcggcac agatccgcaa tatggccacg
      661 gttggcggca acctgctgca gcgcacacgc tgtgtctact tccgtgacac ggccatgtct
      721 tgcaacaagc gtgaacccgg cactgggtgt ccggcgatca ccgggcacaa tcgcacgctc
      781 gcaatcctgg gtaccagcga acattgcatc gcgacgaatc cctcggatat gtgcgtggcg
      841 atggcagcgc tggaggcaac gatacacgtg caggggccaa agggatcgcg cgccataccg
      901 ttcggcgatt ttcatcttct accggccaac acgccccacc gcgaaaccgt attggagccg
      961 ggcgacctga ttacccacgt aacgctccca ccaccggtcg tcggaggcaa gcagctgtat
     1021 ttgaagctgc gcgatcgagc gtcgtacgaa tttgcgcttg tctccgcagc ggtggtgctc
     1081 acgatcgccg gcggcaatat cacgcgtgcc cgcatcgccc tcggcggcgt gggcacaaaa
     1141 ccgtggcgat cgccggacgc cgagcgtgcg ctaaccggca aaaccgcaaa cgaagcgacc
     1201 ttccgccaag cggccgaggc agcgctgcgc ggggccaagc cccagagcga gaacggtttc
     1261 aagatcgaat tggccaggcg ctgcctcacc tatgcgttac gaacggcggc agccagctga
     1321 ttcctaagga gcaaccatgg cgaccacaca tccatcgctc gcgacttctc cgatcggccg
     1381 agacacacct cgtgtcgatg gcccgcgcaa agtcacgggt ttggcgcagt acacctccga
     1441 tttccatttc cccgaaatgc tctacgccgt tcccgttgag gcgacgatcg cgaatggcaa
     1501 attgctcgcg ctggatgctg cggccgcgga gaaaatggtt ggcgtgcgcg ccgtttttca
     1561 tcgcgggaac attggcaaga tctttcgttc cactccggcg cccggtttcg atcgcatctg
     1621 tgaagagcgg cggccaccat tcgaagatga tgtgatccgt tactacggcc agtacatcgc
     1681 gctggcggtg gccgacacct tcgaagccgc caaagccgca gccgatgtgg tccgtgcgac
     1741 ctacgccaaa gaaaagccga acgtagaagc tcgtctggaa gccggcaacg atccggatgt
     1801 ggtgctcaca acctacggac ccgtgccaag gttgcaaagc aagcgcggag accccgaagg
     1861 ttcattcgag aacgcacccg tcaagctcga cgaaacctat gttacgcctg cggaaacgca
     1921 caaccccctt gagctgcacg caaccatcgc gatctgggat gtggacatgc tgactttgta
     1981 tgactcgacg caaggggttg taaatgcgcg cagcgtgctg gcgcaaatgt tcggcttgcc
     2041 gaaggagaat gttcgggtca tttcgaagtt tctggggtcg gggttcggcg ggaaacttta
     2101 tccgtggacg cacgttccgc tcgccgtcgc tgcagcgcgg caattaggca agccggtgaa
     2161 gctggttgtc agccgcaaaa tgatgtttca gtcggtcggg catcgtgcgc atacgcagca
     2221 gcgtgtgcgc ctgggcgcga accgcgatgg caaactcgtt tcgctcatgc acgactacgt
     2281 ctaccacatg tcgatactgg acgattacca cgaagactgc ggtgaagcga cgccgttcca
     2341 ttacagcgtg cccaacctac gcgtgagctt cggccgcgcg cggcgcaata tcggtgcagc
     2401 gtcggacatg cgcggtccgg gcgccgtccc tggcttgtat gcgacggaat cggcgatgaa
     2461 cgagatggcc gaccggctca agatggatcc cgtccaactc cgcattctta atgagccgaa
     2521 gcttgacgaa tcaaatggtc tccccttttc ttcccgccat tacgtcgaat gcttaaatct
     2581 gggcgccgag aagttcggct ggtcgaagcg caacccaaca cccggctcga tgaaacgcga
     2641 cggtcttact ctgggctggg gaatggcggg cgccgcgtgg ccggcggcgc gattagcggc
     2701 ggaagctaac gttcaactgc gagatgacgg caccgttcgg gtcgcctcgg cgacgcagga
     2761 catcggcacg ggcacgtaca cgattctggc gcagcttgcg gccgagaaga ccggcgttcc
     2821 aattgacaac gttgaggtcg tgctgggcga tagctcgctt cccgacggtc cgatctctgg
     2881 cgcttcgatg gccaccgagt cattgatccc agcggtgttt ggagcagcca acgaggcgat
     2941 cgcatcgctg ctcatcattg ccgtcaccag tccgggctcg ccgttcctcg gacataagcc
     3001 cgacgatctt gcctttgcca atggccgcgt attcgtgaag gccgaaggtc ctgggaaagg
     3061 tgttcccttt ggggacgtac tccgccgcgc caacgtccgg ttggtctcag gggctggcaa
     3121 gggtgagcag acgttttttg tccctgggca aaagttctct actcactcat tcggctgtca
     3181 ctttgtcgaa gtgacgtggc aaccggagat cgcgcgcttg cgcgtcagcc gcgttgtgac
     3241 ggtgatggat gccggccgga tcttgaaccc gctcgccggc cggaatcaga tccagggcgc
     3301 ggtggtgatg ggcatcggca tggccttgtt tgaagaaacc acttacgatc cgcagaacgg
     3361 cgcacctatc aacagcaatc tggccgatta tatgatgacg gtcaacgccg acgcgccgcc
     3421 catcgacgta acgttcctgg accatcccga taaggagatt aacgaactcg gcgcgcgcgg
     3481 aatcggcgag atcggcctgg ccggcattgc tgctgcgatt acggcggcgg tccatcacgc
     3541 aaccggagtt cgtgtgcgcg aactgccggt gaagatcgag aacttgttgg tgtgaattag
     3601 agttagcggg tccacctgga aatcagcaaa gagccggtcc gcgacgcgcg ttgacgatcc
     3661 gaagacgcga ccacggatta cggggacgta gagatgtatg ccgctctcaa cagtcaatat
     3721 tccgaatgac gcgagtgcga ttgtcagcac agacgagatc gtagcgccga tctcttcgct
     3781 ttagattatc cactaaccga accagtagag gtaattaaag tcgagaattg atcggaggac
     3841 attttatgga acctgtaagc gtggcaatag ccacaatgaa ggtcgcagtg gcaaagctga
     3901 gcggcatcaa ggcatggtcg cttttatcgt ttattggcgg cgccgcagtg acactcggcg
     3961 tcagcaatct gggcggatcc aacacatccc accacgtcta cgaactgcgc ctgtatcacg
     4021 ttaacgaggg caaaatgaat gcgctaaaag ctcgctttgg cgatcacacc gacgccattt
     4081 ttaagcgcca taacatgaag agcattggct attgggttcc ggaagacccg ccgtattcgc
     4141 agaacctctt tgtctacatc ctggagcatc cgagccgcga ggaagcccgg aagaattgga
     4201 gcgttttcca aaacgatccg gaatggaaaa aggtgaaggc cgactcagag actcaggggc
     4261 cattagtgga ccatatcgac agctacttca tggatccgac cagcttctca gcgctcaagt
     4321 agaaagccgg ggcgctgaca agcggccgaa ggctacgaac aaatgcaagc ggacgagtgc
//
LOCUS       DATILV010000087         1559 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_787909, whole genome shotgun sequence.
ACCESSION   DATILV010000087 DATILV010000000
VERSION     DATILV010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1559
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_787909"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..188)
                     /locus_tag="VLJ17_01985"
     CDS             complement(<1..188)
                     /locus_tag="VLJ17_01985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HSV21781.1"
                     /translation="MAISLKVNGATRSVDAEPDTPLLYVLRNDLELNGAKYGCGMTQC
                     GACTVLVNGAARRSCVTPV"
     gene            459..881
                     /locus_tag="VLJ17_01990"
                     /pseudo
     CDS             459..881
                     /locus_tag="VLJ17_01990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558143.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(948..1265)
                     /locus_tag="VLJ17_01995"
     CDS             complement(948..1265)
                     /locus_tag="VLJ17_01995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21782.1"
                     /translation="MTIREHFKQRFRWAIAAAFGSWILIAVFAMTHTGDGATPLFFVG
                     FAIFIGAILFMNFGIRCPKCRGNLGMTIGHAFMTFGASKHRIGFCPFCGTSIDENIVR
                     DGK"
     gene            complement(1375..>1559)
                     /locus_tag="VLJ17_02000"
     CDS             complement(1375..>1559)
                     /locus_tag="VLJ17_02000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21783.1"
                     /translation="AVGAFVASIIIILTGYRLSISVWSLMLALLPMMIPGFVLEIERY
                     KALDDKADENSNGRYQ"
BASE COUNT          326 a          432 c          492 g          309 t
ORIGIN      
        1 accggcgtca cgcaggagcg tctagccgcg ccgttgacca gcaccgtgca ggcgccgcat
       61 tgcgtcatgc cgcagccgta tttggcgcca ttgagctcga gatcgttgcg cagcacgtag
      121 agcagcggcg tgtccggctc ggcatcgacc gagcgggtcg ccccgttgac cttcaggctg
      181 atggccattg tgggtctcct cgaagatggc agcgcgctct gcgcattttc ccctcaatga
      241 ttctactttg cgtcggcgag ggaagtcgcg tcgaggccgc cggagatcga gtccttccag
      301 ccccaccatt atccaacgag gattgttccg gtaaccggat ccatgcggtc taacgaatga
      361 aagggacttc ccctactcga agcgggtttg agcccgcacg gcatcgaagt gccaagattg
      421 agtttgcgtt gttcaatctg ataacgagag gggaagtcat ggagaagatt actactgtgg
      481 gaatcgatct ggcaaaggct gtgttctcgc tgcacggggt ggataggacg gggcggatgg
      541 tgctccggcg tacggtacgg cgcgatcagc tggtggaggt ggtggcaggg ttatcgccgt
      601 gtctgaccgg catggaagcc tgcagcggtg cgcacgagtg gggccggcgg ttccaggagt
      661 tggggcacac agtgcggctg atggcgccga agttcgtggt gccctacagg aagagcggca
      721 agaacgacgg caacgatgct gaggccatct gcgaggcggt gcagcgcctg atgaagatcc
      781 gcggcatcgg gcccacaacg gccctggcca tcgttgccac cgtgggcgac gcacgcgaat
      841 tcaagaatgg ccggcagttc gccgcctgga tcggcttagt gcggccggct gcggaccgtg
      901 aacccggcca cgctggttca cggtccgctc gaacgtgttg ttaggcgtca tttcccgtcc
      961 cgaacaatgt tctcgtcgat tgatgtgcca cagaagggac agaatcctat tcggtgcttt
     1021 gatgcgccaa atgtcataaa ggcgtggcca atggtcatgc cgagattgcc ccggcacttc
     1081 ggacagcgga ttccgaaatt catgaaaagg atagcgccga taaatatagc aaagccgacg
     1141 aagaacaacg gtgttgcgcc atcaccagta tgggtcatag caaacaccgc aattaggatc
     1201 caagagccga atgccgccgc aatcgcccaa cggaagcgct gcttgaagtg ttcgcgaatg
     1261 gtcacgaatg acgcctaacg ttcgcggcca cgcgcgggcg cggagaatgg ttgaccgaag
     1321 cgcgacgctt ctcgcccgtc gcggtggggc gcgctgttag agcgcgcgga attgctactg
     1381 gtatctcccg ttgctgttct catccgcttt gtcatccaac gccttgtatc tctctatttc
     1441 gagtacaaat ccgggaatca tcattggcaa taacgcgagc atcagcgacc aaaccgaaat
     1501 gcttaaccga taacctgtga gaatgatgat tatgctagcc acgaaggcgc cgacggcat
//
LOCUS       DATILV010000088         6722 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1554241, whole genome shotgun sequence.
ACCESSION   DATILV010000088 DATILV010000000
VERSION     DATILV010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6722)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6722
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1554241"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(9..1301)
                     /locus_tag="VLJ17_02005"
     CDS             complement(9..1301)
                     /locus_tag="VLJ17_02005"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HSV21784.1"
                     /translation="MANVVVVGSQWGDEGKGKIVDWLSEQADIVVRFQGGHNAGHTLV
                     IDGVTYKLSLLPSGVVRPGKLSVIGNGVVLDPAALIEEIGRLKRQGVEVTPDSLRIAE
                     NVTLILPLHQELDVLRESSNAGTQIGTTRRGIGPAYEDKVGRRAIRLMDLADLSVLGA
                     KIDRLLAHHNTLRRGMNLPELEPKAIYDVLAAVAPLILPYMDSVWLLLDRKRRDGKRI
                     LFEGAQGALLDVDHGTYPYVTSSNTVASQAATGSGLGPSAVGYVLGISKAYTTRVGAG
                     PFPTEQDNEIGRTIGERGREFGTVTGRRRRCGWFDAVMVRQTVRTSGIDGLALTKLDI
                     LDGFSEIKVCVGYRFDGRTVDYLPASEHAQARVEPVYETIAGWQERTAGARSFAELPA
                     PAIKYVRRIEELVGCPLALLSTSPEREDTILLRNPFET"
     gene            complement(1577..3238)
                     /locus_tag="VLJ17_02010"
     CDS             complement(1577..3238)
                     /locus_tag="VLJ17_02010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014492474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mucoidy inhibitor MuiA family protein"
                     /protein_id="HSV21785.1"
                     /translation="MRCSATTLCLIFGLAAPAAAQTDVTSAIESVTVYPDGATVTRRI
                     RVDLAQGDSVLRAGDFPPSLDPASLRVEGEAQARLTIGAIDARPPRAERPPADPALDE
                     RIEALRDDRARLDGKIAAATARRKFAERFSEQAPAGMGEKGEARPLSEWRAAFAAVED
                     EVMAADAAIREARIMQRHLDRELARLDAERTANPPRKMEVRIDINSEAATTTTLLVSY
                     TVRGARWSPMYDARLETGGRDRKPSIDLVRRAEIVQTTGEDWRDVQLAVSTVRTAKGG
                     SAPELRPLIVRYPTPPRPLAEGAARAPISTFAPPPAAPRQEGMAQDELARKADRIVAE
                     EQEATADTGGFQAVYRIPGRVSVSASEGAKNFRISSAVIAPDLVVRAAPAIDATAFLE
                     ASFRHGEDAPLLPGRVAIYRDGIYVGRGQMTMTSKDENVRLGFGTDDHVKITRSTTRQ
                     IEGSAGIINSAKTERREFKTSIRNGHDMPIRVVIEDQVPVSEIDEVKVELLPMTTAPT
                     EKDVRNRRGVMAWNLEVAPSEAKEIRIAWRVRWPADKAVIFAPGQ"
     gene            complement(3446..5032)
                     /gene="serA"
                     /locus_tag="VLJ17_02015"
     CDS             complement(3446..5032)
                     /gene="serA"
                     /locus_tag="VLJ17_02015"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007614731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004617 - phosphoglycerate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HSV21786.1"
                     /translation="MTPRVLISDALSPAAVQIFKDRGVEVDFQPDLGRDKDKLAAVIG
                     RFDGLAVRSATKVTPKILERADRLKVIGRAGIGVDNVDITAATSKGIIVMNTPFGNSI
                     TTAEHAITLMLSLARHIPQADASTQAGKWEKNRFMGVEITGKTIGIIGCGNIGSIVAD
                     RAIGLRMHVIAYDPFLSPERAMTLGVDKVELADLFRRADFITLHTPLTDKTRNILSAE
                     AIAATRKGVRIINCARGGLVDEKALRAALDAGHVAGAAFDVFTEEPATANPLFGHPNV
                     VCTPHLGAATTEAQENVALQIAEQMSDHLLRGAITNAVNFPSITAEEAPRLRPFITLA
                     EKLGSFAGQLTETGISKVQIAYDGEVAKMNTRALTLAAIAGLLRPMLQNVNVVSAAVV
                     AKERGIAVEETKREGECDYESLITVTLTTERMTRDVSGTVFADGRPRIVNIKGIRMDA
                     EFGTSMLYITNLDKPGFIGRFSSVLGDAGINIATFHVGREAPGANAVALIEVDGELPA
                     DVLAKVEALPQVRQAKLLRF"
     gene            complement(5191..6363)
                     /locus_tag="VLJ17_02020"
     CDS             complement(5191..6363)
                     /locus_tag="VLJ17_02020"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004648 -
                     O-phospho-L-serine:2-oxoglutarate aminotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HSV21787.1"
                     /translation="MTNAMPSVRPQFPHFSSGPCAKRPGWSLQALTDAALGRSHRAKL
                     GRAKLKRAIDLTREVLEVPADYRIGIVPASDTGAVEMALWSLLGARPITMLAWESFGE
                     GWVSDVLKELKLKDVTVLKAGYGELPDLTSVDWSTDVVFTWNGTTSGVRVPNGEWIAV
                     DREGLAICDATSAAFAQPLDWVKLDVATFSWQKALGGEAAHGMLVLSPRAVARLETYK
                     PAWPLPKIFRLTKGGKLNEGVFEGETINTPSMLCVEDYLDALQWAKSIGGLKALMARA
                     DANTKAVASWVARTPWVDFLADDPTIRSNTSVCLKIIDPAVTALSKEAQSAFAKALAG
                     AVEKEGAGYDIAHYRDAPPGLRIWCGASVEAADVEILTRWLDWAFTKTRDALPKAA"
     gene            complement(6501..>6722)
                     /locus_tag="VLJ17_02025"
     CDS             complement(6501..>6722)
                     /locus_tag="VLJ17_02025"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HSV21788.1"
                     /translation="VSASYSVVHSTQGKGAIGFSLGVGVDYALYQNVFLRGEFEYLQF
                     GDIGHGNSNSTSLLNLNAMSLRTGLGMKF"
BASE COUNT         1228 a         2144 c         2060 g         1290 t
ORIGIN      
        1 acatcttatt acgtttcgaa cggattgcgc aggaggattg tgtcctcccg ctctggactt
       61 gtcgacagca gcgctagggg gcagccaact agttcctcga tccgcctcac atattttatg
      121 gcaggcgctg gcagttccgc aaaggatctc gcccccgccg tccgttcctg ccagcctgct
      181 atcgtttcat agaccggctc gacccgcgcc tgggcgtgtt cgctggccgg caggtaatcg
      241 acggtgcgac cgtcgaatcg gtaaccgaca caaaccttta tctccgaaaa cccgtccaga
      301 atatcgagct tggtgagcgc gagtccgtca attccactgg tgcggacagt ttgccgcacc
      361 atcacggcat cgaaccagcc gcagcggcgt cgacgccccg taacggttcc gaattcgcgg
      421 cctcgctcgc cgatggtccg accaatctcg ttgtcctgct cggtcgggaa aggccccgcc
      481 ccgacccgtg ttgtgtaggc cttgctgatt ccgagcacat agcccactgc cgacggtcct
      541 aggcccgagc cggtcgccgc ctgagacgca accgtgttgg acgacgtcac atacggataa
      601 gtgccatgat caacatccag cagcgcgccc tgggctccct cgaacaggat tcgcttaccg
      661 tcacgtcgtt tgcgatcgag cagcagccag accgaatcca tatagggcaa gatgagcggc
      721 gcgactgcgg cgagcacatc gtaaatcgcc ttgggctcaa gctcgggaag attcatgccg
      781 cgcctcaagg tgttatgatg cgccagcagc cggtcaatct tggcgccgag gaccgagagg
      841 tcggcgaggt ccatcaggcg aatcgcccgc cgcccgacct tgtcttcgta agccggtccg
      901 attccgcgcc gggttgtgcc gatttgggtg cccgcattgg aggactcgcg caagacgtca
      961 agttcctggt gcaacggtag aatcaaggtc acgttctcgg caatgcgcag cgaatctggc
     1021 gtcacctcaa cgccctggcg tttgagcctc ccgatttcct cgatcagggc ggcaggatcg
     1081 agcaccaccc cgttcccgat caccgaaagt ttgccgggtc gcaccacgcc ggacgggagc
     1141 aatgatagct tgtaagtgac cccatctatt acgagcgtat ggccagcatt gtggccaccc
     1201 tggaaacgca ccacgatgtc ggcctgctcg gagagccaat caacaatctt gcccttgcct
     1261 tcgtcccccc attgggagcc gacgacgacc acattcgcca tggcgcaccc ttaaaattca
     1321 cacccgttga atgcggagtg gcgccggccg aattcgagcg ggccctgcga ttcgattaag
     1381 gaaccgctgc cacctccctt ggagggagga cgagctttgc ctgaaagcgc agaaggagct
     1441 aacaccaatg cccgcatccg tttatgggat accggatgat ggcgccacag gcaagttgca
     1501 aaactgagct cgcgccgcca gataaaggtc caacctgttg attcggtggt atttttggtg
     1561 gccgtctacc cgaatctcac tgccccggag cgaagatcac cgccttgtcg gcgggccagc
     1621 gcactcgcca ggcgattcga atctcctttg cctcgctcgg tgcgacctcc aggttccacg
     1681 ccatgacgcc acgccggttg cgcacgtcct tttcggtcgg cgcagttgtc atcggcaaca
     1741 actcaacctt gacctcatca atttcgctca ccgggacctg atcctcaatg acgacccgga
     1801 tcggcatatc atggccattg cggatcgacg ttttgaattc ccggcgctcg gtcttggcag
     1861 agttgatgat gccggccgaa ccttcgatct gtcgtgttgt gctgcgcgta atcttgacat
     1921 gatcgtcggt gccgaagccg agccgcacat tctcgtcctt tgaagtcatc gtcatctggc
     1981 cgcggccgac atatattccg tcgcgataga tcgcgacccg cccgggcaat agcggcgcgt
     2041 cctcgccgtg cctaaagctc gcctccagga acgccgtggc gtcgattgcg ggcgctgcgc
     2101 gcaccacaag atccggcgct atcacggcgg aggaaatgcg aaaattcttg gcaccctcgc
     2161 tagctgagac gctgacgcgg ccaggaatcc gatagaccgc ctggaacccg ccggtgtcgg
     2221 ccgtcgcttc ctgttcctca gccacgatgc ggtcagcctt tctggcgagt tcgtcttgcg
     2281 ccatgccttc ctgccgcggt gccgcgggcg gcggggcaaa ggtgctgatg ggcgccctgg
     2341 ccgccccttc ggcgagcggg cgcggcggtg tcggataacg cacgatgagc gggcgcagct
     2401 ccggcgcgct gccgccttta gccgtgcgca ccgtcgatac ggcaagctgc acgtctcgcc
     2461 agtcctcgcc tgtggtctgg acgatctcgg cgcggcgaac aagatcgatc gacggcttgc
     2521 ggtcgcgccc gccggtctca agccgcgcat catacatcgg cgaccagcgc gcgccccgca
     2581 ccgtgtaaga aaccagcaat gtcgtggtcg tcgcggcctc ggaattgatg tcgatccgca
     2641 cctccatctt gcgcggcggg ttggcggtac gctcggcgtc gagccgcgcc agctcgcggt
     2701 cgaggtgtcg ttgcatgatc cgtgcctcgc ggatcgccgc gtcggcggcc atgacttcgt
     2761 cttctactgc cgcgaacgcc gcccgccact cgctgagcgg ccgtgcctcg cctttttcgc
     2821 ccatgccggc cggtgcctgt tcggaaaagc gctcggcaaa tttgcgacgc gcggtggcgg
     2881 ctgcgatctt gccgtcaagg cgcgcgcggt cgtcgcgcaa cgcttcgatg cgctcgtcga
     2941 gagccggatc tgccggtgga cgttcagcgc gcggcggcct tgcatcgatg gcaccgatgg
     3001 tgagccgcgc ctgcgcctcg ccctcaaccc gcagcgatgc ggggtcgagc gagggcggaa
     3061 agtcgccagc acgcagcacg ctgtcgccct gtgccagatc gaccctgatc cgacgcgtga
     3121 ccgtcgcgcc atcgggatag actgtcaccg attcgattgc cgatgtgacg tcggtttgcg
     3181 ccgcggccgg cgccgcgagc ccgaaaatca agcacaatgt ggtcgctgaa cagcgcatgg
     3241 ggcgtccttt gtgttccctg gcccatcgtc aggggcccga caatggaata cctgccggga
     3301 tcgcgatgag ccgtttcaac agctctcgcg actccagcgt ggtcgtgacg aacgcggcgg
     3361 cacgggatcg cgatcgtctt acgagtcagt ttcggcagcg gcgcgtcggg tccacgtcgt
     3421 gcgcaaagtc ggggtcatgt cgtgttcaaa accgcaaaag cttggcctgc cgcacctgcg
     3481 gcagcgcctc taccttggcg agcacgtccg ccgggagctc gccatccacc tcgatcagcg
     3541 ccaccgcatt ggcgccaggc gcctcgcggc cgacatgaaa tgtcgcaatg ttgatgccag
     3601 catcaccaag caccgaggag aagcggccga taaaaccggg tttgtccaga ttggtgatgt
     3661 agagcatgga cgtgccaaac tcggcgtcca tgcgaattcc cttaatgttg acgatgcgcg
     3721 ggcggccgtc cgcgaacacg gtgccggaga cgtcgcgagt cattcgctcg gttgtcaacg
     3781 tcacggtgat aaggctctcg taatcgcatt cgccttctcg cttcgtctcc tcgaccgcaa
     3841 tgccgcgttc cttggcgacg accgcggccg acaccacgtt gacgttctgc agcatcggac
     3901 gcagcaggcc ggcgatcgcc gctaaggtca gcgcccgcgt gttcatcttg gcgacctcgc
     3961 cgtcataggc gatctgcacc ttggaaatgc cggtctcggt gagctgtccg gcgaatgagc
     4021 cgagcttctc ggcgagcgta atgaaaggcc gcagccgcgg cgcctcctcg gccgtaatag
     4081 aggggaaatt caccgcattc gtgatggcac cccgcagcag gtggtcggac atttgttcgg
     4141 cgatttgcaa tgccacgttc tcctgcgctt ccgtggtagc agcgccgaga tgaggcgtgc
     4201 acacgacgtt cggatggccg aacagcggat tggcggtggc cggctcctcg gtgaaaacgt
     4261 cgaaggctgc ccccgccacg tggccagcat cgagggccgc ccgcagggcc ttctcgtcca
     4321 cgaggccacc gcgcgcgcaa ttgatgatgc ggacgccctt gcgcgtcgcc gcaatcgcct
     4381 cggcactgag gatgttccgg gtcttgtcgg ttaggggcgt gtgcagcgtg atgaaatcgg
     4441 cacgtcggaa aagatcggcc agttcgacct tatcaacacc gagcgtcatc gcccgctcgg
     4501 gcgacaggaa cgggtcatag gcgattacat gcatcctcag cccgatggca cggtccgcta
     4561 cgatcgagcc gatattgccg cagccgatga tgccaatcgt tttgccagtg atctcgacgc
     4621 ccatgaacct gttcttctcc cacttgccgg cctgggtcga cgcgtcggcc tgggggatat
     4681 gccgggcgag cgacagcatc aaagtaatgg cgtgctcggc agtggtgatc gaattgccga
     4741 acggcgtgtt catcacgatg atgcctttgg aggtcgcggc cgtgatgtcg acattgtcga
     4801 ccccaatgcc ggcgcgtccg atgaccttga gccggtcggc gcgttcgagg attttcggcg
     4861 taaccttagt ggcggagcga accgccaggc cgtcaaatct gccgatgacg gcggcaagtt
     4921 tgtccttgtc cctgccgaga tcgggctgaa aatcgacttc gacgccgcga tccttgaaga
     4981 tctggacggc ggcaggcgag agtgcgtcag agatgagaac gcgaggagtc atggtatccg
     5041 cccgtgaatt ggttgctggt gatacaggct ttctactccc ctcccccgtg tggggagagg
     5101 tttggggtgg ggtcggggga ggcagcacac cagtgccaca tggctcccca tcccgaccct
     5161 cccccgcacg cgggggaggg ggaagattcg tcacgccgcc ttgggcagcg catccctagt
     5221 cttggtgaag gcccaatcaa gccaccgggt caatatctcg acgtctgctg cctcgacgct
     5281 ggcgccgcac cagatgcgca agccaggtgg cgcatcacga tagtgggcga tatcgtagcc
     5341 ggcaccttcc ttttcgaccg cgcccgcaag cgccttggcg aacgccgact gggcttcctt
     5401 ggaaagcgcc gtcacggccg gatcgatgat tttcaggcag accgaagtat tggagcggat
     5461 cgtcggatcg tcagcgagaa aatccaccca aggggtacgc gccacccaac tggcgacggc
     5521 ttttgtgttg gcgtcggcgc gggccatcag agccttcaat ccgccgatcg atttcgccca
     5581 ttgcagagca tcgagataat cctcgacaca cagcatggag ggcgtgttga tggtctcgcc
     5641 ttcaaagaca ccttcgttga gcttgccgcc cttggtcaga cgaaagatct ttggcagcgg
     5701 ccatgccggc ttgtaggttt cgagccgcgc caccgcgcgc ggcgacaaca ccagcatgcc
     5761 atgggccgct tcaccaccca gcgccttttg ccacgagaag gtcgcgacat cgagcttcac
     5821 ccaatcgagc ggctgcgcaa aggccgccga ggttgcatca cagatcgcca ggccttcgcg
     5881 atccaccgca atccattcac cgttgggcac gcgaacacct gaagtggtcc cgttccaggt
     5941 gaacaccacg tcggtcgacc aatcgaccga agtgagatcg ggcaattcgc catagccggc
     6001 tttaagaacc gtgacatcct tgagcttgag ctcctttagg acgtcgctca cccagccctc
     6061 gccgaatgat tcccaggcca gcatggtgat gggccttgcg ccgagcagcg accacagcgc
     6121 catctcgacc gccccggtat cggaagccgg cacgattcca atccggtaat cagccggcac
     6181 ttcgagcact tcgcgcgtga gatcaatggc gcgtttgagc ttcgccctgc cgagcttggc
     6241 ccgatgcgaa cgtccgagag cggcgtcggt gagggcttgg agactccagc ccgggcgctt
     6301 ggcacagggg ccggaagaaa aatgcggaaa ctgcggccgc acgctcggca tcgcgttggt
     6361 catgtctcta tcctttcaga taggcgcccc ccggtgggga ggggtgtccc gaagcgggga
     6421 ttaggggagc gcaagcgcgc cgtcaagcct catcgataga agcgttgtgt ttggcacctt
     6481 tgcccaatcg agcgcgcgaa tcagaatttc attccgaggc cggtgcgcag gctcatggca
     6541 ttcagattga gcaggctcgt ggaattcgaa ttgccgtggc ctatgtcacc gaattgcaga
     6601 tattcaaact cgccgcgaag gaaaacattc tggtaaaggg cgtagtcgac gcccacgcct
     6661 aaggaaaacc cgatggcgcc tttcccttgc gtcgaatgga cgactgagta gctcgcgctg
     6721 ac
//
LOCUS       DATILV010000089         5136 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4109160, whole genome shotgun sequence.
ACCESSION   DATILV010000089 DATILV010000000
VERSION     DATILV010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5136)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5136)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5136
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4109160"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..454)
                     /locus_tag="VLJ17_02030"
     CDS             complement(<1..454)
                     /locus_tag="VLJ17_02030"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HSV21789.1"
                     /translation="MTTPAYISDTGRRGGRLLRILGVGFGIAVGVGATIGGGILRTPG
                     EVAGYMGTAGLTSAIWLVGGVYTLLCSGAVSELATMLPRAGGWYVYSERAFGKRVGFV
                     VGCCDWMNQTVGIAFLAVALGEFAAELHPALSPYTTAIAITGLSALFLL"
     gene            complement(870..2765)
                     /locus_tag="VLJ17_02035"
     CDS             complement(870..2765)
                     /locus_tag="VLJ17_02035"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family oligoendopeptidase"
                     /protein_id="HSV21790.1"
                     /translation="MRPLNTGFAALWLAAVVLPMMTLAADSQTNLQADNPAYRWDLGE
                     LYPSLQAWTMERDKILAQANALDKYKDTLGRSAGDMLTALTAISGAKKESVRLSTYAS
                     LKGDENVTIGINQERVQAAQVLATAIDETTAWLRPEIIKLGADKVHAFERESPELARR
                     FGFFLDNALRYAPHTLGTEAEGVMAAAGNVLSQPNIIYSQLANGELPVPTVTLSDGSM
                     IRLDGAAYIRYREAPHRADRKKVFDAFWQAHSAFQGVFGATLTTQVMGEELDANMRHF
                     QDALADATFADNMPESVYRTLVSEANKNLPVLHRYLKLRKDALGITDDLRYYDLYAPI
                     IELKSPPHFTVDQSKAIALAVTRVYGPEYAGLLKQGFAGRWMDLYPHPGKARGAYMNP
                     GAYDVHPYLLFNNHDDYESLATFVHEWGHAVHSLLANKAQPFENASYSPFIAETASIT
                     NEMLLDDYLVARASDDAEKLYYLGQELDLIRVDFFRQSMFAEFQLAIHQEMEKGGTLS
                     GEGMTGLYCGLLKKYYGDTQGVLKVDPAYCVEWAYISHFYYGFYVYQNATSMAGAAAF
                     ADALQKEGAPAQMRFIAMLKAGGSDYPYALYKKAGLDMATQAPYEALAARMNRILDQI
                     DAIKIKK"
     gene            complement(2885..3097)
                     /locus_tag="VLJ17_02040"
     CDS             complement(2885..3097)
                     /locus_tag="VLJ17_02040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21791.1"
                     /translation="MYTLLNAESNGVDSTFETKLTPTVKEASCANPDLRPLIDQGVVV
                     VLEYRGKQGNPIGTVNINRETCGALR"
     gene            complement(3537..4457)
                     /locus_tag="VLJ17_02045"
     CDS             complement(3537..4457)
                     /locus_tag="VLJ17_02045"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSV21792.1"
                     /translation="MHRMILVSLMLFAALPVGSNAANTSDQKQKAILVTGASTGIGRK
                     ITERLAAHGYFVYAGARKETDLQALGAIPNVRAVRLDVTKPEDIDVAVETVTKAGRGL
                     YGLVNNAGIYTEAPLIDTAPEEFDLVMKVNLYGPYRVTKAFAPMIKASHGRIINIGSI
                     SGILNETGGGAYQMSKHALETFSATMAQELISSGVQVSIVEPGAYKSEIMRNTKNRSG
                     TVTQQDVDHNAKLPEPDDVAAAVEMAFSEPKPKLRYMVVPEADQAEYTIKVQIEQLVQ
                     LNEGQPYTYDRTALIKMLDAALVGARPRSK"
BASE COUNT         1001 a         1501 c         1495 g         1139 t
ORIGIN      
        1 tcaggaggaa aagcgccgat agcccggtga ttgcaatcgc agtcgtgtac ggtgacaggg
       61 ccggatgaag ctcggccgca aactctccca atgccaccgc aagaaacgca atgccaaccg
      121 tctggttcat ccaatcgcag cagccaacaa cgaatccgac gcgcttgccg aaggctcgct
      181 cggagtacac gtaccagcca cccgcgcgtg gcagcatagt ggcaagctcg ctcacggcac
      241 cgctgcacag cagcgtgtac acgccaccca cgagccagat cgcagaggtc agccctgcgg
      301 tgcccatgta cccggcgact tcacccggag tccgcaggat gccacctccg attgtggcgc
      361 caacgccgac agcgatccca aagccgactc cgagtattcg cagcagtcgg ccgccgcgtc
      421 ggccagtgtc ggagatgtac gcaggggtgg tcatctgtgt tgttgctgtt gcgacgcctg
      481 cgccgaatct tatcaggcga tcacgtcgag ggactgattc tgtgcacgcc agatggttgc
      541 ccaggcgagc agcggcaagt gcagcccgag tgtccgctgc gtcatttctg actgtccgct
      601 aacgagcgat cgaactgtcg ctgaagggtc gattcgagtc aatcagccaa cagtcgcagt
      661 cggccagaag tcgcctgtcg gcctcgatgc ttagttctcc cgcaagcggc cgcttggctc
      721 gactgggaag cccttctctg tatttaccac agtgagagcg acacccttgg cagacctgcg
      781 gagtgaacga accgttgggt cacgtaatcg agatacgtta cttaggtcgt gcaaccgcat
      841 agagacggtc ggcctcgctt agcgtagcct cacttcttta tcttgatcgc gtcgatttgg
      901 tccaaaatcc ggttcatacg cgcggccagc gcctcgtagg gtgcttgcgt tgccatgtcg
      961 aggccggcct tcttatagag cgcgtacgga tagtccgatc cgccggcctt cagcatcgcg
     1021 atgaaacgca tctgcgcggg cgcgccttcc ttttgcagcg cgtcggcgaa cgcagcggcg
     1081 ccggccatag atgtcgcgtt ttggtaaaca tagaagccgt agtagaaatg cgagatgtat
     1141 gcccattcca cgcaataggc cgggtccacc ttcagcacgc cttgcgtgtc cccgtagtac
     1201 ttcttgagta gtccgcaata taggccggtc attccctcac ccgacagcgt gccacccttt
     1261 tccatttcct ggtgaatggc caactgaaat tcggcaaaca tgctttggcg gaagaaatcg
     1321 acgcggatta ggtccagttc ttggcctaga tagtagagct tctcggcatc gtcgctggca
     1381 cgcgccacca agtagtcgtc gagcagcatc tcattggtga tcgaggcggt ctcggcaatg
     1441 aagggggaat agctcgcatt ctcgaagggc tgcgccttgt ttgccagcaa cgaatggacg
     1501 gcatgccccc attcgtgcac gaaggtcgcc agcgattcgt aatcgtcatg attgttgaaa
     1561 agcaggtaag gatgcacgtc gtaggcgcct gggttcatgt aggcacccct ggccttgccg
     1621 ggatgcggat acaggtccat ccatcggccc gcaaaaccct gttttaggag ccccgcgtat
     1681 tctggcccgt agacgcgggt cacagcgagt gcgatcgcct tcgactgatc aaccgtgaaa
     1741 tgcggcggcg atttgagctc gatgatcggc gcatagagat cgtagtagcg cagatcatca
     1801 gtgatgccga gcgcgtcctt gcgcagcttc aaatagcggt gcagtaccgg caggttctta
     1861 ttggcctcgg agactagcgt gcgatagacc gactccggca tgttgtctgc gaacgtcgca
     1921 tcggccagcg catcttggaa atggcgcatg ttggcgtcga gttcttcgcc catcacctgc
     1981 gtcgtcagcg tggcgccgaa caccccctga aaggcgctgt gagcctgcca gaatgcatcg
     2041 aacaccttct tgcggtcggc gcgatgaggc gcctcgcgat atcggatata agcggcgccg
     2101 tcgagcctga tcatgctgcc gtccgacaag gtgaccgtcg ggaccggcag ttcgccattg
     2161 gcaagctgac tgtagattat attaggctgg ctcagcacgt tgcccgccgc cgccatgacc
     2221 ccttcggcct ccgtacctag ggtatgcggt gcgtagcgca gcgcattgtc gagaaagaat
     2281 ccgaagcggc gcgccagttc gggtgattcc cgctcgaaag cgtgaacctt gtcggcgccc
     2341 agcttaatga tttccggcct cagccaggcg gttgtttcgt caatagccgt ggcgagaact
     2401 tgagccgcct gcacgcgttc ttggtttatg ccgatcgtga cattctcatc gcccttcaac
     2461 gaggcataag tgctgaggcg cactgactct ttctttgcac cgctgatcgc ggtcagggct
     2521 gtaagcatgt cgcctgcgct gcggccaagc gtatctttgt atttgtctag cgcgttcgct
     2581 tgcgccaaga tcttatcgcg ttccatggtc cacgcctgca gcgagggata gagttcgccg
     2641 agatcccaac ggtacgcggg attgtcggcc tggaggtttg tttggctgtc cgctgccaac
     2701 gtcatcatcg gcaggaccac cgcggcaagc cacagcgccg caaaacccgt gttcaatgga
     2761 cgcatggtgt actccacgca gtgctcagcg cctgcgattg atcgcgtcag ttaagtaacg
     2821 accggtacac attgccgcat ccgtgcctcg agaccaaatt gacgttgacg ttccggcgcg
     2881 cggctcacct aagtgcaccg caggtttcgc gattgatgtt gaccgttcct attgggttgc
     2941 cttgctttcc gcggtactcc aaaaccacaa cgacgccttg gtcgatcagc ggccgcaagt
     3001 cagggtttgc gcagctggct tcctttaccg tcggagttaa tttcgtctcg aatgtactat
     3061 cgacgccatt cgattcggcg ttcaggagcg tgtacatgat ggtcagtctt agtcctggcc
     3121 cggccctcgc gctatccaat ctggtatccg ggtcgatttc agcgggggcg gcgccgttag
     3181 cctggccggc gatctccgag agtctccttt gcagcgaccg ggctgaatta aggtcttgca
     3241 tgtcacacgc tgccagagta gcgcacacaa ttcccaagca gccgagctgc tttctaaatc
     3301 tcacgcgagg tctcagtccc gctctcattt actctcctgt actagagtgt agtcggcaga
     3361 caatgacgag acggttaagc tgcagcagct caatctcatt aggagaagca ggtggctcac
     3421 aactgctccc gcctttaacg acacctcatg catcatagcg attccgctcg tgatggccgc
     3481 cgaaccttcc gggctcctgt cagaggcgtt cgttgcaatc cggcaatgcc gctcagtcac
     3541 ttcgatcgtg gtcgtgcacc cacgagcgcg gcatcgagca tcttgatgag cgcggtacga
     3601 tcgtaggtgt acggctgccc ttcgttgagt tgaacgagct gctcgatctg gaccttgatc
     3661 gtgtactcgg cctggtctgc ctcgggcacc accatgtacc gcagcttcgg tttgggctcg
     3721 gagaaagcca tctctactgc cgctgcgaca tcatcaggct cggggagctt ggcattgtga
     3781 tctacgtctt gctgagtaac cgtgcccgat cgattcttgg tattccgcat gatttcggac
     3841 ttgtaggctc cgggctcgac gatgctgacc tgcacgccgg aagaaatcag ttcctgggcc
     3901 atcgtggcac tgaaggtctc cagggcgtgc ttgctcatct gataggctcc tcccccggtc
     3961 tcgttgagaa tgccgctgat ggagccaatg ttgatgatgc ggccatgact ggccttgatc
     4021 atcggcgcaa atgccttcgt cacacgatag ggtccgtaga gattcacttt catcaccaaa
     4081 tcgaattcct caggcgctgt gtcgatcaat ggtgcttccg tatatatgcc cgcattgttt
     4141 accaacccat agaggccacg gccggccttg gtcaccgttt caacggcgac atcgatgtcc
     4201 tccggtttgg ttacgtccag gcgcaccgcg cgaacgttcg gtatcgctcc aagcgcctgg
     4261 agatcggttt ccttgcgggc tcccgcatag acgaaatatc catgcgccgc gagtcgctcg
     4321 gtgatcttgc ggccgatgcc cgtgctggcc ccggtgacga gaatggcttt ctgtttctga
     4381 tcagatgtat tagcggcgtt actgccgacc ggcagtgcgg cgaacagcat gagcgagacg
     4441 agaatcatgc ggtgcatggt gcgccccctg agaatgcgtt ttgatggcac tgtaggccgg
     4501 cgccccagat tctgaaggca tatggccgtc gtcggcagtt ggcaatgccc gttcacggct
     4561 gtagaggcgt gcgtgctcga tcagaatgag gttgtccggt cagtcacatg atatccgacg
     4621 tctgtccagc gggtgcccag cgtcgcgcgc cgcaaatgct ggcgcgccgc gtcggcggac
     4681 gacctccctt tgcgcccgaa atccggcgca agtcggccaa aagccgaagt tcacgcccgc
     4741 gaaatggctg cccccaagct gacatttctc atgaccgacg ccaaaccagt cgtttagtcg
     4801 ttaaaaggtt gcggcggtcg gcggacgctt tgtggtcagt aatgcagcac aacggagtgt
     4861 tgcccgttag cgcattgcaa atgctgcaac gcgacgccag ctgagatgag cgaggttagg
     4921 aatctattca aactttggcc tttgaatgcg cgtataagtg gcacacacgg ccgttgttct
     4981 ttggccgata tttcgcaatc tcaagaagta aggggaagac tatgaagaat accaaggtgt
     5041 ggtgtttgct tggtttgctt tcactggcaa gtgcaccagt ttcgcaggct cagcagacca
     5101 gtggggcgac tgagaaagcc gtcatggcat tggaga
//
LOCUS       DATILV010000090         6134 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_788149, whole genome shotgun sequence.
ACCESSION   DATILV010000090 DATILV010000000
VERSION     DATILV010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6134
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_788149"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..713)
                     /locus_tag="VLJ17_02050"
     CDS             complement(<1..713)
                     /locus_tag="VLJ17_02050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21793.1"
                     /translation="MSAEIVMGPKNTSLRGRSDSGELADRYHISFRRRLRVGAIGLLV
                     VNLALGLFARQQQHGTIDYAINIFDTSFISTNYIHLAQISFQHYVDDRIRAVEPDEIA
                     KANVLLENVLDEVEVAIERSTSSRSRELGLEIKAQIAALPNGGLALPDLADRIANIQQ
                     AMEQLSTRNTDVGLKARDDVEAISFESDLLLLGSIVTSVMLAGLALTLLHRMISSFKQ
                     RSSAQLSAALEGMPQGLSM"
     gene            1196..2467
                     /locus_tag="VLJ17_02055"
     CDS             1196..2467
                     /locus_tag="VLJ17_02055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21794.1"
                     /translation="MRPALAVPSFAIQTSQPCAACHIGAYGPHLTPAGRDFKLHGYIR
                     SDGQDHGLPLAFTTQTSFTHTATSVPGGAAPGFKPNDNVAVDEVAAYYAGRITSEIGG
                     FIAFKFDGVAQQAQIDVIDIRHVREGQLFGQDALFGITVNDGPTVQDAWNSTPFWGYP
                     WSRSALAPTPMASTLVDGGLDQRVIGAGAYMLWNDLLYLEADAYKGLNTTALRAFGQP
                     VDDSDRTTTFMPYARLAVIRDWEKHHVEFGAFALSASVVPGNDQTSGLSLRKTDVAFD
                     ATYQYITDPAKVTSDRLSAHATYIHETASMDTGDAVLRGALPDHSLDTMRADVSYSFG
                     ATVTPSMQYFRTTGTADVTYWATPNGSPNSDGMIFEVAYVPWGKPDSPFPNVNLRLAV
                     QYVNYFSFDGSPVNARSNNNFYFGFQTAVKF"
     gene            2504..2830
                     /locus_tag="VLJ17_02060"
     CDS             2504..2830
                     /locus_tag="VLJ17_02060"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HSV21795.1"
                     /translation="MTIRFAATVAFLMGIIVAVQAAATITIGQRGLVFTQSSASLAKG
                     DRIIFSNEDDVTHNIHVFGPAVDESADLGLQKAGVTLTYKFDKIGAYRVRCNIHPSMK
                     MEVTVK"
     gene            3210..3389
                     /locus_tag="VLJ17_02065"
     CDS             3210..3389
                     /locus_tag="VLJ17_02065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21796.1"
                     /translation="MKRTILFLAGFGIVFLASAVQTFGKNWLGQVCPYPGRALTRNGS
                     LSAACYQPPPTLLGR"
     gene            complement(3458..5236)
                     /locus_tag="VLJ17_02070"
     CDS             complement(3458..5236)
                     /locus_tag="VLJ17_02070"
                     /EC_number="1.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020174929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent dehydrogenase, methanol/ethanol
                     family"
                     /protein_id="HSV21797.1"
                     /translation="MFETRRLMRGICTAAAIMAAAVGTAAAQQTIAPASATPVPGPMP
                     DVLQKYTPVTAERLRQPEDRNWLLFRRTYDGWGYSPLSQITPSNVGQLQLVWSFATGQ
                     VEGHQAPPIVNNGVMFVATPGNQVIAIEAKTGNLLWRYKRPLPDDLTNLHPTSRGVGL
                     YGDRLFFASADAVLVALDAKTGKEVWTAKVAEYKNGYYTSIMPLVADGKVMMGTSGGE
                     LGIRGFVAAYDAETGKEAWRTFMVPEPGQPGSETWPKGDQWKTGGGSVWVPGTYDPDT
                     NLAFWGTGNGGPWMGDQRPGDNLYTASTVALDGSTGQIKGHFQYHQNDSWDWDEVSPP
                     ILVDYKFKDKTIKGLVDVARNGYLWQLERTAGKINFITAQNFVSHNVFMGIQSNTGRP
                     IVDPDHKPGTNKLATFCPSLWGGKDWPPAAYSPKTRLIYIPANENLCTELNAEVPKYA
                     PGERYTGVTTNVLRIRSGADHIGELQAWNLDTGKRVWTTNLPSENWGPVLATGGGVLF
                     SGGTADRLFRAFDAQTGKILWQYPTLSGVNGVPVSFAVGGKQYIAVQSGWGVDAARMQ
                     GRLNLLFPGKYLDVPPGGAVYVFAVK"
     gene            complement(5329..5964)
                     /locus_tag="VLJ17_02075"
     CDS             complement(5329..5964)
                     /locus_tag="VLJ17_02075"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske (2Fe-2S) protein"
                     /protein_id="HSV21798.1"
                     /translation="MSAERSNLLNWAASQVSVAQAGRTNGAERGCNVQASRRDVLAAA
                     ALLGVNAVVPATADPADERPKEGDYLVAIDDTNLDALSPKHIVGPQIIAWPMDPMARL
                     IRNGSRLNKVLLVRLDPATLVGVTRERTAEGVVAYSAICPHAGCEVSGWVEEQKILEC
                     PCHNSRYNPREGGAIIDGPSTRGLAALPLKIIDDKLIVAKPFIGRVGIAPA"
BASE COUNT         1224 a         1885 c         1750 g         1275 t
ORIGIN      
        1 aacatgctga gcccctgcgg catgccctcc agagccgcag agagctgagc gcttgatcgc
       61 tgtttgaacg agctgatcat gcggtgaagg agtgtgagcg ccagccccgc caacatcacg
      121 ctggtgacga tcgaacccag caacaggaga tcggactcga aggaaattgc ttcgacgtcg
      181 tctcgagctt tcaagccaac atcggtgttc cgcgtgctta actgctccat cgcctgctga
      241 atattggcta tccgatccgc cagatccgga agggccaatc cgccattggg gagcgctgca
      301 atctgggcct tgatttccag tcccagttcg cgcgagcggg aggaagtcga cctttcgatc
      361 gcaacttcca cctcgtccag tacgttctcc aaaagaacat tggccttggc aatctcgtcc
      421 ggctccacgg cacggatgcg gtcgtcgaca taatgttgaa atgatatctg cgcgaggtgg
      481 atgtagttag tggagatgaa tgaagtatca aatatgttga tggcgtaatc gatggtcccg
      541 tgttgctgtt ggcgggcaaa caggccgagc gcaagattga cgaccagcag cccgatcgcc
      601 cccactcgga gccgtcgacg aaacgagata tgatatctgt cggctaactc gccggaatcg
      661 gagcgtcctc ggagcgaagt atttttcggt cccataacaa tctcggcaga catcactgtg
      721 tgatactccc gtactcaata ttcaggctcg gcaactgata gatgtaaact cgttgtatta
      781 aagctacgtt cagatgatgt gataatctcg cacttcgtca ggcgcccaat accgcccgat
      841 tgggtaggca atccaacctg tcggcgccga gcgcactcga ctgcgtcacg gaccagacag
      901 agaccagcac aagcgcggat ttccagcaaa atgagacacc gccacgcctc cagaaatctg
      961 cggcgcagtg gcactcatca cttgttaacc atgttcactt acgtggtcgg tgtttttgat
     1021 ccgcgaagag cggcttgctg agatgggttt ccgactcatg attacgcgac acagagcgat
     1081 acctcccgag accgcggcta cggtcgaaca gagtccccat tgggggtggg gggcggccat
     1141 cgcattttgc gcctcggggt ttctaatccc gctactgcta tccgcagccc tgggaatgag
     1201 accggcgctc gctgtgccgt cgttcgcgat ccagacctcc caaccctgcg ccgcttgcca
     1261 tatcggggcg tacggcccgc atctgacgcc agcagggcga gactttaagc tgcacggcta
     1321 tatccgcagc gacggccagg accatggact gcctctggcg tttacgacgc aaacttcctt
     1381 cacccacacc gcgacatcgg tgccaggcgg ggcggcgccc ggcttcaagc caaacgacaa
     1441 cgtcgctgtt gatgaggtgg cggcatacta tgcgggacga attacgtctg aaataggtgg
     1501 gttcattgcg ttcaagttcg atggcgtggc ccaacaggct cagatcgacg ttatcgatat
     1561 tcgccatgtg cgcgagggcc agttattcgg ccaggatgct ctttttggca taaccgtcaa
     1621 cgacggtccg acggtgcagg atgcctggaa ttcgacaccg ttttgggggt acccctggag
     1681 tcggtccgcc ttagcaccga cgccgatggc ctcgactctg gtcgacggcg gtctcgatca
     1741 gcgcgtcatc ggtgctggcg cctacatgct gtggaacgat ctgttgtatt tggaggccga
     1801 cgcctacaag ggccttaaca ccaccgccct gagagctttc ggccagcccg tagacgacag
     1861 cgaccgcacg acaaccttca tgccctatgc acggctagcc gttattcggg actgggagaa
     1921 gcatcacgtg gagttcggcg cgtttgcatt atccgccagc gtcgttcccg gtaacgacca
     1981 gacctccggg ctcagcctcc gcaagaccga cgtggccttt gatgcaacct atcagtacat
     2041 aaccgatccc gccaaggtga ccagcgacag gctctccgct catgcaactt atatccacga
     2101 gactgccagt atggacaccg gcgacgcggt gctgcgtggc gcgttgcccg accattcgct
     2161 ggacacgatg cgggccgacg tctcctatag tttcggcgct acagtgacac cgtcgatgca
     2221 atactttcgc acaaccggga cggccgatgt aacctactgg gccaccccga atggcagtcc
     2281 caactcagat ggcatgatct tcgaagtcgc ctacgtgccc tggggcaagc cggattcgcc
     2341 gtttccgaat gtgaacttgc ggctggccgt gcagtatgtg aactatttta gctttgacgg
     2401 cagccctgtt aacgcccgca gcaacaataa tttctatttc ggtttccaga ccgccgtgaa
     2461 attctagccg ttccgttccc ctctctctga tacggaaatc gtcatgacca ttcgcttcgc
     2521 cgccactgtt gccttcttga tggggattat cgttgccgtg caagccgcgg ctacaattac
     2581 gattggacag cgcgggttgg tattcaccca gagttcggcg tcgctggcaa agggcgaccg
     2641 gatcatcttc tccaatgaag acgacgtcac acacaatatc cacgtcttcg ggccggcagt
     2701 tgacgagtct gccgaccttg gtctgcagaa ggcgggcgtc accctgacct ataaattcga
     2761 caagatcggc gcctacaggg tacggtgcaa tatccatccg tcgatgaaaa tggaagtgac
     2821 agtcaagtga ggcgacgcgc aggtgaaccg gagcgaatgc gaatgaacaa gctcgcgagc
     2881 cactgcgcga tttatccatt ccatggtgcg gctgtccgct gtcgtccgtc gaagtcgaaa
     2941 cgcaggtttc caatcgaagt cgcgctcgcc agcccccctc gaaaagacat ggcctgccgc
     3001 aagctgcgct cctcggggca gaaccgcgcc tgccgcgctg tttcgccagc cgacgacagt
     3061 taccatcgag cgcatcaaga caacttgcgc cagcaacctt cactcatccc ggccgcctgt
     3121 ttcacacggc gcttgatgtt gcgccaaccc ggtggcgttg gccgtgccgt tgcaaacaag
     3181 cagctggtcc aattcaggcg ccgtttccga tgaaaagaac gatcctattc ctcgcaggtt
     3241 tcggcatcgt ttttctcgca agcgccgtcc agacctttgg caagaattgg ctcggccagg
     3301 tatgtcccta tccgggtcgt gctttgaccc gcaatggctc gctgtcggcg gcgtgctatc
     3361 agccgccgcc tacgctgctt ggaagatagt ccgaagccgt cattaaaaga ctacggtcga
     3421 tacaagcggg caccgtacaa cgtcggtcga ccgcgcgcta cttcacggca aacacataca
     3481 ccgcaccgcc cggcggcaca tcgagatact ttccgggaaa tagcaggttc aaccgcccct
     3541 gcatacgagc ggcgtccacg ccccagcctg actggaccgc aatatattgc ttgccgccca
     3601 ccgcaaacga taccggcacg ccgttgacgc ccgatagagt cgggtattgc caaagaattt
     3661 tgccggtctg ggcatcgaaa gcgcgaaaca ggcgatccgc agtgccgccg gagaacagca
     3721 cgccgccgcc tgtcgccagc accgggcccc aattctccga tggcaggttg gtggtccaca
     3781 cgcgctttcc ggtgtcgaga ttccacgcct gtaattcgcc gatgtgatcg gcgcccgacc
     3841 ggatgcgcaa cacgttggtg gtgacgccgg tgtaacgttc gccgggggcg tatttcggca
     3901 cctcggcatt aagctcggtg caaaggttct cgtttgccgg gatgtagatc agccgtgttt
     3961 tcggactgta cgcggcgggc ggccaatcct tgccccccca caggctcgga cagaatgtgg
     4021 cgagcttgtt ggtgccgggc ttgtgatcgg ggtcgacaat cggacgtccc gtgttggatt
     4081 ggatacccat gaacacgttg tgactgacaa agttctgcgc cgtgatgaaa ttgatcttgc
     4141 cagcggtgcg ttcaagctgc cacaggtaac cgttgcgcgc tacgtcaacc aaccccttta
     4201 tggtcttgtc cttgaacttg tagtcgacca ggatcggcgg ggagacttca tcccaatccc
     4261 aggaatcgtt ctggtgatat tggaagtgcc ccttgatctg tccggtgctg ccgtccagtg
     4321 cgaccgttga ggcggtatag agattgtcgc cggggcgctg atcccccatc caggggccac
     4381 cattgccggt gccccagaag gccagattgg tgtccgggtc ataggtgccg gggacccaga
     4441 ccgaaccgcc gccggtcttc cactggtcgc ccttcggcca cgtttcgctg cccggctgtc
     4501 ctggctccgg aaccatgaat gttcgccatg cttccttgcc ggtttctgca tcataggcgg
     4561 caacgaagcc acgtattccg agctcgccgc ccgacgtgcc catcatgact ttgccgtcgg
     4621 cgaccagcgg catgatcgag gtgtagtagc cgttcttgta ctctgcgact ttggcggtcc
     4681 acacttcctt gccggtcttg gcatcaagcg cgaccaggac cgcgtcggcg gaggcaaaga
     4741 aaagcctatc gccataaagc ccgacaccgc ggctggtcgg atgcaagttc gtcaaatcat
     4801 cggggagtgg ccgcttatag cgccacagga gattgccggt cttcgcctcg atggcaatga
     4861 cttggttgcc tggcgtcgcc acgaacataa cgccattgtt gacaatgggc ggcgcctgat
     4921 ggccttccac ctggccggtc gcaaagctcc atacaagctg gagctggccg acattggacg
     4981 gcgtgatctg tgaaagcgga ctgtagcccc agccatcgta ggtgcggcgg aacaacaacc
     5041 agttgcggtc ctccggctgg cgcagacgct cggccgtgac cggcgtatat ttttgcaaga
     5101 catcgggcat tggcccaggc accggcgtcg ccgacgcggg tgcgatcgtc tgctgcgcgg
     5161 ctgccgtgcc gacagccgct gccataatcg ccgcagcggt gcatatgccc cgcattaatc
     5221 ttctggtttc aaacatggcc cttcctccta gcagccggct ttgtcggctg ttcaccttgg
     5281 catgctgcta ccatgatttg aagcctcgaa cccagctcca agggcgcctc acgccggcgc
     5341 gatgccgacg cgtccgataa acggcttggc aacaataagc ttgtcatcga tgattttcag
     5401 gggaagcgcc gccaggccgc gcgtgctcgg tccgtcgatg attgccccac cctcgcgcgg
     5461 attgtagcga gaattgtgac aggggcattc gaggatcttc tgctcctcca cccaaccgct
     5521 gacttcacag cccgcatgtg gacaaattgc cgaataggcg accacaccct cggctgtacg
     5581 ctcccgcgta acaccgacga gtgttgcggg atcgagacga accaacagga ccttgttgag
     5641 ccgagaaccg ttgcggataa gcctagccat cgggtccatt ggccatgcga tgatctgagg
     5701 ccctacaatg tgcttgggcg aaagggcatc caggtttgtg tcatcgatag cgaccagata
     5761 atcgccttct ttcgggcgct cgtccgcggg atccgccgtc gcgggcacaa cggcgttgac
     5821 accgagcagc gccgctgccg ccagaacgtc gcggcggctc gcctgcacgt tgcaaccccg
     5881 ctccgctccg tttgtacgtc ccgcctgtgc gacgctcacc tggcttgccg cccaattcaa
     5941 aagattgctg cgctccgccg acatttttta atctgccaaa gatcgatgaa aggacacagc
     6001 ccatgatgac atctttgcga gcactcgtca tcgtggagtg aggcttgaaa cgacggtatt
     6061 cgtcgccgcc caaacgctcc cccggaggcc cggcggcccc gcagccgtat cgtccggagc
     6121 tcggcgatct catg
//
LOCUS       DATILV010000091         3443 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_20405, whole genome shotgun sequence.
ACCESSION   DATILV010000091 DATILV010000000
VERSION     DATILV010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3443)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3443)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3443
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20405"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2217)
                     /locus_tag="VLJ17_02080"
     CDS             complement(<1..2217)
                     /locus_tag="VLJ17_02080"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSV21799.1"
                     /translation="MNVSAPFIIRPIATTLLMIGLTLLGVVAYFALPIAGVPQVDVPT
                     IRVSARLPGANAETMATSVATPLEGQLSLISGVTLISSASSLGVTQIQVEFDLGRSIE
                     GAAQDVQTAISAAGGLLPKNLPSPPTYEKVNPADAQLMSIAVMSSDLPISKVDEYVEN
                     FLTPQISRITGVGLVDFHGQQKPAIRIQINPAAAAAIGITLEDVRAALSTTTVNSPKG
                     TLDGPKQSLTLDTTDQVFDSATFNDAIVAYRNGAPVRVRDLGKAIDGVETTREAAWVG
                     GQRAVIIDVHKQPGYNINQTVRRVKDALPDLQRPLPPSIKLQIMGDRTQTIRASVVDV
                     QVTMAISIGLVVLVMFLFLRRVRATLIPSVTIPVSLLATCAVMYLAGYTLDNVSLMAL
                     TIAVGFIIDDAVVMIENIMRHIEAGERPLQAALVGSREIGFTIVSMTLSLTAVFIPLL
                     LMGGLIGRLFREFAVTVSMAIIISGVVSLTLTPMMCAWLLRPHQAGDKEGRIVVALER
                     GFRATLDWYATSLRWSLRHRLFIVSLMAATMAATVYLYVVIPKGFFPQQDNGLIQGTT
                     EAAQDISYTAMVERVHELAKVVMADPDVATVYYWVGANPTVNTGRLQIDLKPIAERKA
                     TATEVINRLRRATLVVSGIALFGQARQDVQIGARVSKTQYQYTLQDPNVAELFQWAPI
                     VLAKLAALPQLQDVTGDLQATAPRMMLKIDRNSIGRFGITPQAIDDTLYDSFGQRQV"
     gene            complement(2242..3387)
                     /locus_tag="VLJ17_02085"
     CDS             complement(2242..3387)
                     /locus_tag="VLJ17_02085"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSV21800.1"
                     /translation="MMRKWTVIGALLLAAGLAHYFGAARGSIPFLAPSAAPRPAAIPV
                     PVSAAPAQRRDVPIYLTGLGTVQAYNSVLVKSRVDGQIVKINFSEGKDVRAGDVLVEI
                     DARPYEAALNQALANKLKDEAQLDNARLDLDRLTRLVATNAVSKQQADTARALVAQLD
                     ATVKADQALIDMARTQLDYTKIHSPIDGRAGTRLIDIGNMIRATDTAGIVTINQLNPI
                     FVNFALPADSLPPVRARTKDGDVPVVAQDSNLVDLATGALTVIDNQVNAATGTVTYKA
                     TFANGDEVLWPGQFVNVRVELDIRRDVLAVPVRAVQQGPDGPFVFVVGPGRIVEKRPI
                     KVGLLSKATAIVNTGLQPGELVVTDGQYRIQSGTLVELLANPVEAPS"
BASE COUNT          668 a         1024 c         1091 g          660 t
ORIGIN      
        1 cacctgccgc tgcccgaagg agtcatataa tgtgtcgtcg atggcttgcg gggtaattcc
       61 gaatcggccg atggagttgc ggtcgatctt cagcatcatg cgcggcgcgg tcgcctgcag
      121 atcgcctgtt acgtcctgca actgtggaag cgcggcgagt ttggccaaca cgatgggcgc
      181 ccactggaac aactccgcca cgttggggtc ctgcagcgtg tattgatatt gggttttgct
      241 cacccgtgca ccgatctgca cgtcctggcg tgcttgcccg aacaacgcta tgccggatac
      301 cacaagcgtt gcccgccgca gccggttgat cacctccgtc gcagttgcct tgcgctcagc
      361 gatcggcttg aggtcgatct gcaggcgacc agtgttgacg gtcggattgg cgccgaccca
      421 gtagtacacg gtggcgacat cagggtccgc catcacgacc ttggcaagct cgtgcacgcg
      481 ctcgaccatg gcggtgtagg agatgtcctg ggccgcttcg gtagtgccct ggatcaaccc
      541 gttgtcctgt tgcgggaaga atcctttcgg aatgacgaca taaagataga cggttgccgc
      601 catggtcgcg gccatcaggc tcacgatgaa cagacgatgg cgcagggacc agcgcaggct
      661 cgtcgcatac cagtcgagcg tggcgcggaa tccacgttcg agcgcgacca cgatgcggcc
      721 ctccttgtca cccgcctggt gtgggcgcaa cagccacgcg cacatcatgg gcgtgagggt
      781 gagcgagacc acgcccgaaa tgatgatggc catgctgacc gtgacggcaa actcgcgaaa
      841 caggcgcccg atcagaccgc ccatcaacag cagcgggatg aagacggcgg tgagcgaaag
      901 cgtcatcgat acgatggtga agccgatttc acgcgacccc accagggcag cttgcagcgg
      961 ccgttcgccc gcttcgatgt ggcgcatgat attctcgatc atcacgacgg cgtcgtcgat
     1021 aatgaagccg accgcaatgg tcagcgccat cagcgacacg ttgtcgagcg tgtagccggc
     1081 gagatacatc acggcgcagg tggcgagcag cgacaccggg atggtaacgc tcggaatgag
     1141 cgtcgcccgg acacgccgca aaaacaggaa cataaccagc accacgagac caatgctgat
     1201 cgccattgtg acctgcacgt cgaccaccga ggcccggatg gtttgggtgc ggtcgcccat
     1261 gatctgcagc ttgatcgagg gcggcaaggg gcgctggagg tccggcaatg catctttgac
     1321 gcgccgaacc gtttgattaa tgttgtagcc gggctgtttg tgaacatcga tgataacggc
     1381 gcgctggccg ccgacccaag ccgcttcccg ggttgtctca acgccgtcga tggctttgcc
     1441 gagatcacga acgcgcaccg gcgcgccgtt gcgataggcc acgattgcgt cgttgaacgt
     1501 cgcggaatcg aaaacctgat cggtagtgtc gagcgtcaga gactgcttcg gcccgtccag
     1561 cgttcccttc ggcgagttga ccgttgtggt agagagcgct gcacggacgt cttcgagggt
     1621 aataccgatg gcggcggccg ccgcaggatt gatctgaatc cggatcgcgg gtttctgctg
     1681 gccgtggaaa tcaacaaggc cgaccccggt gatccgggaa atctgcggcg tcaggaaatt
     1741 ctcgacatat tcatcgacct tggaaatcgg gaggtctgat gacatgacgg cgatcgacat
     1801 cagctgtgcg tcggccggat tgaccttctc ataggtcggc gggctcggca ggttctttgg
     1861 caacagaccg cccgccgcgc tgatggccgt ctgcacgtcc tgagctgcgc cttcgatact
     1921 ccggccgaga tcgaattcca cctgaatctg cgtgacaccc agcgagcttg cggaactgat
     1981 caaggtgacg cccgaaatca aggacagctg accttcgagc ggcgtcgcta ccgaagtcgc
     2041 catggtctcc gcattggcac ccggaagcct tgcgctgacg cgtatcgtcg gcacgtccac
     2101 ctgcggcacg ccggcgatcg gcaatgcaaa ataagcaacg acgcccaaca gcgtaagacc
     2161 gatcatcagc aaggtcgtag cgatcgggcg aatgataaag ggcgctgaaa cgttcatgcg
     2221 tggccttaag attgccgagg attagctggg cgcctccacc ggattggcga ggagttctac
     2281 aagggtcccg ctctggattc gatattggcc gtcggttacc accaactctc ccggttgcag
     2341 cccagtattc acgatggcgg tggccttgct caacagcccg accttgatgg gtcgcttctc
     2401 aacgatccgg cccggcccga ccacgaaaac aaatgggccg tccggccctt gctggacggc
     2461 cctgaccggc accgcgagca catctcgccg gatatcgagt tcaacccgca cattgacgaa
     2521 ttggccgggc cacagcactt catcgccatt ggcaaaagtc gccttatagg tgacagtgcc
     2581 ggtcgccgca ttgacctgat tatcgatgac cgtgagcgcg ccggttgcga ggtcgacgag
     2641 gttgctatcc tgggcgacaa ccggaacgtc accgtccttc gtccttgcgc gcaccggcgg
     2701 caacgaatcg gccggcaacg caaagttcac aaagatcggg ttcagctgat tgatggtgac
     2761 gatgccggcg gtgtcggtcg cgcggatcat gtttccgata tcgatcagcc gggtgccggc
     2821 gcggccgtcg atgggcgaat ggattttggt gtaatccaat tgcgtccgcg ccatgtcgat
     2881 caacgcctgg tcggctttga cggtggcatc aagctgcgcc acgagggcac gagcggtgtc
     2941 ggcttgctgt ttgctcacgg cgttggtggc gacgagccgg gtgaggcgat cgagatcgag
     3001 gcgcgcattg tcgagttgcg cctcgtcctt gagcttgttc gcaagcgctt ggtttagcgc
     3061 cgcctcgtac ggccgcgcat cgatttccac gagcacgtcg ccggcacgaa cgtccttgcc
     3121 ctcggagaag ttgatcttga cgatttggcc gtcgacgcgc gacttcacca gcacgctgtt
     3181 gtaggcctgc acggtgccga ggccggtgag atagatgggt acgtcgcgcc gttgtgccgg
     3241 ggctgccgat accggtaccg gtatcgcggc tggcctgggg gcggcggatg gcgccaggaa
     3301 cggaatcgag cctcgtgcgg cgccgaaata atgtgcgagg ccggcggcca agagcaaagc
     3361 cccaatgact gtccacttgc gcatcattct cgtgtcaacg cgacggagga atgttcacct
     3421 ccatgggtca atacggcaat ctg
//
LOCUS       DATILV010000092         3011 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3854693, whole genome shotgun sequence.
ACCESSION   DATILV010000092 DATILV010000000
VERSION     DATILV010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3011
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3854693"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..412)
                     /locus_tag="VLJ17_02090"
     CDS             complement(<1..412)
                     /locus_tag="VLJ17_02090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018260809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HSV21801.1"
                     /translation="MRDPVGFWADASGEIDWYEPATRVFDPTMGVYGRWFVGATCNTC
                     FNAVDRHVARGRGAQSAIIYDSPVTGVKRAISYAELLVEVKTLAAILHDFGVRKGDRV
                     VIYMPMVPEAAVAMLACARIGAIHSVVFGGFAATE"
     gene            632..1051
                     /locus_tag="VLJ17_02095"
     CDS             632..1051
                     /locus_tag="VLJ17_02095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YkvA family protein"
                     /protein_id="HSV21802.1"
                     /translation="MMTTWRERWQERAHRLKRDVVAIAFAVRDPRVPWYAKAMGACVV
                     AYALSPIDLIPDFIPVLGYLDDLVLVPLGLLLVMHLIPADILAEHRVAAAKVVDRPIS
                     RAGAVAVIAVWVLAAALLVSLVGRVFGIRMLGGSASS"
     gene            1048..2676
                     /locus_tag="VLJ17_02100"
     CDS             1048..2676
                     /locus_tag="VLJ17_02100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003599070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase"
                     /protein_id="HSV21803.1"
                     /translation="MTNTIYDIDLARNPANFQPLTPLSFLERAAAVFPRRAAIVHGAR
                     TWTYGEFYARARRLASALAKHGIGRGDTVSVMLANTPAMLDAHYGVAMTGAVLNALNT
                     RLDATILAFTLDHAETKVLITDREYANVIKDALGVAKTKPLVIDYDDPEYSGPGERLG
                     AVEYEDLLQQGDPDFSWLRPGDEWDAIALNYTSGTTGDPKGVVYHHRGAYLLAMGNVL
                     TCAMGRHPVYLWTLPMFHCNGWCFPWTISIVAGVHVCLRQVRAAPIYDAIARHKVTHL
                     CGAPIVMSTLLNASEAEKKSLPHTVEFVTAAAPPPEAVLAAMRAAGFNVTHVYGLTEV
                     YGPASVNEWHTEWDTLPATEQAAKKARQGVRYPVLEGLDVRNPDTMQPVARDGETLGE
                     VMFRGNVVMRGYLKNKASTEKAFAGGWFHSGDLGVMHPDGYIQLKDRSKDIIISGGEN
                     ISSIEVEDALYRHPAVQAAAVVAKPDDKWGETPCAFVELKPGASTTAEDLIAWCRKHL
                     AGYKCPRYVMFTELPKTSTGKIQKFRLREMARKG"
     gene            complement(2719..>3011)
                     /locus_tag="VLJ17_02105"
     CDS             complement(2719..>3011)
                     /locus_tag="VLJ17_02105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="laccase domain-containing protein"
                     /protein_id="HSV21804.1"
                     /translation="PMIRQPNYETGTDVRDRFVAADPANARFFRPAARERHFMFDLAG
                     YVVARLAAAGIGTIEDVDACTYADAEKFFSYRRMTHRGEADYGRHVNAIVLV"
BASE COUNT          540 a          948 c          945 g          578 t
ORIGIN      
        1 gttcggtcgc tgcgaagccg ccgaacacca ccgagtggat ggccccaatg cgtgcgcaag
       61 ccagcatcgc aactgcggcc tccggcacca tcggcatgta aattacgacg cgatcaccct
      121 tgcggacgcc gaaatcgtga aggatggcgg cgagggtctt cacctcgaca agcaactccg
      181 catagctgat ggcgcgcttt acgccggtga ccggcgaatc gtagatgata gcgctttgcg
      241 cgccgcgtcc ccgcgccaca tggcggtcga ccgcattgaa gcacgtattg caggtggcgc
      301 ccacgaacca gcggccgtag acgcccatgg tggggtcgaa aaccctggtt gccggctcat
      361 accaatcgat ttcgcctgag gcgtcggccc agaaaccgac cgggtcgcgc atggagcgag
      421 catagatttc gtgatagcgg ctttggccgg ggtgctgttg cgataccgaa actgtgctca
      481 cttggaacct ctctctcgcg gtccggctct accccaccgt gatgttctac cgcatcgctt
      541 gtgttctggt gttcgtggtc tctttggcgc cgctacggtc aggcagagcc tatcggccta
      601 attggcgcac ctctcgcggt gtgacgagca gatgatgacg acttggcgag agcgttggca
      661 agagcgcgcg caccgtctca aacgggacgt cgtggcgatt gcgttcgcgg tgcgcgaccc
      721 gcgggtgccc tggtatgcca aggcgatggg ggcttgcgtc gtggcttatg ctctgtcgcc
      781 gatcgatctc atcccagact tcatcccggt gctcggttat cttgacgatc tggtgctggt
      841 gccgctggga ttgctcctgg ttatgcacct gatcccggcc gatattctcg ccgagcaccg
      901 cgttgcggcg gccaaagtcg tggaccggcc gatcagccgc gccggcgctg tggcggtgat
      961 tgcggtttgg gtgttggcgg cggcgttgct ggtctccctc gttgggaggg tgttcggcat
     1021 caggatgctt ggaggttctg cgtcgtcatg accaacacca tttatgacat tgatctcgcc
     1081 cgtaatccgg cgaactttca gccgctaaca ccgctgtcgt tcctggagcg tgccgcggcg
     1141 gtgtttccgc ggcgcgccgc catcgtacat ggcgcccgca cctggaccta tggggagttc
     1201 tacgctcgcg cccgccgcct cgcctcggcg cttgccaagc atggaatcgg gcgcggcgac
     1261 accgtttcgg tgatgctcgc caatacgccc gcgatgctcg atgcccatta cggggtcgcc
     1321 atgacgggcg ccgtgctcaa tgcgctcaac acccggctcg atgccacaat tctcgccttc
     1381 acgctcgatc acgcagaaac caaagtgctc atcacggacc gcgaatacgc gaacgtcatc
     1441 aaggacgccc tgggtgtcgc caagaccaag ccgctggtca tcgactacga cgatccggaa
     1501 tattccggtc ccggcgaacg gctgggcgcc gtagaatacg aggacctgct ccaacagggc
     1561 gatccggatt tctcctggct aaggccaggt gatgagtggg acgctatcgc tctcaactac
     1621 acctccggca ccaccggcga tcccaagggc gtcgtctatc accatcgcgg cgcctacctg
     1681 cttgcgatgg gcaatgtcct gacctgtgcc atgggccgac acccggtcta tctctggact
     1741 ctaccaatgt tccactgcaa tggttggtgc ttcccttgga cgatttcgat tgttgccggc
     1801 gtccatgtgt gtctgcgcca ggtgcgcgcc gccccgatct atgacgctat tgcgcgccac
     1861 aaggtgacgc atctgtgcgg cgccccgatc gtgatgtcga cgctcctcaa tgcgagcgag
     1921 gccgagaaga aatcgttgcc ccacacggtg gagttcgtca ccgcggcggc gccaccgccc
     1981 gaagccgtgc tcgccgccat gcgtgccgcc gggttcaacg tcacccatgt ctacgggctc
     2041 accgaggttt acggccccgc gagcgtaaac gagtggcaca ccgaatggga cacgctgccg
     2101 gccaccgaac aagcggccaa gaaggcccgt cagggcgtgc gctaccctgt gttggaaggt
     2161 cttgacgtac gcaaccccga taccatgcaa ccggtcgccc gcgacggcga gacgctcggc
     2221 gaggtgatgt tccgcggcaa cgtggtgatg cgcggctacc tcaagaacaa ggcctcgaca
     2281 gagaaggcct ttgcgggcgg ctggttccat tcgggcgatc tcggcgtcat gcatccggac
     2341 ggctacatcc aactcaaaga ccgctccaag gacatcatca tctcgggcgg tgagaacatc
     2401 tcctctatcg aggttgaaga tgcgttgtac cggcatccgg ccgtacaggc cgccgccgtg
     2461 gtggcaaagc ctgacgacaa atggggcgag acgccctgcg ccttcgtgga attgaagcca
     2521 ggtgcgagta ccacggccga ggatttgatt gcgtggtgcc gcaagcatct cgccggctac
     2581 aaatgcccgc gctatgtgat gttcacggaa ctgccgaaga cctctaccgg caagattcag
     2641 aaattcaggc tgcgggagat ggcgaggaag ggttaaagag gcggagcggt gtgccgtcgt
     2701 cgcgacaagc gcctcccatc acactaacac gatcgcgttg acatgccggc cgtaatcggc
     2761 ctcgccgcga tgggtcatgc gccgatagct gaagaatttt tccgcatccg cgtaggtgca
     2821 ggcatcgaca tcctcgatcg taccgatacc agccgcggcg agccgcgcca ccacgtagcc
     2881 ggcgagatcg aacatgaaat gccgctcgcg tgcggccggg cggaagaagc gcgcgttggc
     2941 ggggtcggcg gcgacgaaac ggtcccggac gtcggttccg gtttcgtagt tcggctgccg
     3001 gatcatcggg c
//
LOCUS       DATILV010000093         2233 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2321964, whole genome shotgun sequence.
ACCESSION   DATILV010000093 DATILV010000000
VERSION     DATILV010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2233
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2321964"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            188..334
                     /locus_tag="VLJ17_02110"
     CDS             188..334
                     /locus_tag="VLJ17_02110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21805.1"
                     /translation="MRGLSGDQPMRVLAILALALLLAGCEGDRIKNGSMNERQAQPQS
                     TVLT"
     gene            complement(521..862)
                     /locus_tag="VLJ17_02115"
     CDS             complement(521..862)
                     /locus_tag="VLJ17_02115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21806.1"
                     /translation="MSDPSAPSELEKRSTETTASTPLKFSVLRLALAFVIAGVSDVIG
                     AFASLAPPIGWAIDVVTAALLFVVLGWQWLLLPGLVLEAIPGIGVVPFWLLVVGAIAV
                     LGTPRPKIGQR"
     gene            complement(1236..>2233)
                     /locus_tag="VLJ17_02120"
     CDS             complement(1236..>2233)
                     /locus_tag="VLJ17_02120"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HSV21807.1"
                     /translation="MIAHDYPMELSSLSGVHATATTIVIRYATMTSPPAIATVDVNTG
                     AVSPIKLLVSSASLQEFENYFSTPQSIEFRTGDGEIAHAFYYPPYNPDWRAPASERPP
                     LLVKSHGGPTTATDSALDLSVQFWTSRGFGVLDVNYRGSTGYGRKYRERLYGQWGVID
                     VVDCISGAKFLAARGDVDDGRLAVRGGSAGGYTTLCGLTFHTEFAAGASYYGISDLIA
                     LATETHKFELHYTDWLIEPFVSDSALYHDRSPINFADRLSAPVIFLHGKDDPVVPINQ
                     AQSMYSALQRRNVPTCLLIFQDEKHGFRQSAHLRQALEAELLFYSMNLTRAPLTS"
BASE COUNT          510 a          628 c          662 g          433 t
ORIGIN      
        1 agcatcggct acggtggagg aagctgccgc aatgtttagg acctcgatcg agacaattga
       61 gcgaaaggcc aaaaagctgg gcattctgcg cgccgaccga aagcggttat cggcgcgcta
      121 tgtgctgaag gtgaaaaaat gatcagtacc gccgctgctt tggcgggatg ccgactagga
      181 ggttccaatg cggggactct cgggagatca gcctatgcgc gtcttagcga tcctggctct
      241 agcactgttg ctggccggct gcgagggcga ccgtatcaag aatggcagca tgaacgagcg
      301 ccaagcgcag ccacaaagca ctgtgctcac ctaggctagg gccacaagcg gactcacgtt
      361 tctcggctga agccacgcgt gcttgccgcg gcggtccatc atttgcgaga tgcgctcact
      421 cgaccattgt cgagagcgtc ccagtccagc aagcgtgagc ctgccctcag ggccaaattg
      481 ccatagagtg cgccaaatcg ctgcccacgg gggcgacgcc tcagcgctgt ccaatcttcg
      541 gccgaggcgt gcctaataca gcaattgctc caactaccag cagccagaat ggaactaccc
      601 cgatgcccgg tatcgcctct aggaccagcc ccggcaaaag cagccactgc cagcccagca
      661 cgacgaacaa cagcgcggca gtcacgacat cgatcgccca tccgatcggc ggcgccaagc
      721 tcgcgaaagc gccaatcaca tcggatacac ccgcgatgac gaaggcgagc gcaagtcgca
      781 ataccgaaaa tttgaggggc gttgaggctg tcgtctcggt tgaccgcttt tctaattccg
      841 agggagcaga aggatcggac attttcaact gtcgctcttc ggcttgtagg atcgggagcc
      901 gatgatacac caccttcggc gccgcggaac tcgaagctgt gtcagctctg ggtcttggca
      961 gggtcaaaat gcgacctcac ggggagggca gcttttgacg caaaggggcc gctctagacg
     1021 gggtttgcat ctgttcacat gcgcctgtgg ctggcgagaa gcccgatcta ttggctaact
     1081 gaagcgcttc ggcgcggggc cgaagaacga gagccaccta gaacataatc cggcgcagtg
     1141 cgaagcggct ttccaagaag atgacgctca aacaacagcc taacgcgcga tgcaattctg
     1201 tgcagcatcg aatgctcgat agctctgtcg tgacatcacg acgtaagcgg ggcccgtgtc
     1261 aggttcatgg aatagaacag gagctccgct tcaagcgcct ggcgaagatg tgcggactga
     1321 cgaaatccgt gcttctcgtc ctggaatata aggagacagg tcgggacgtt tcggcgttga
     1381 agcgcggagt acatgctttg ggcctgattg atcggcacga cgggatcgtc cttaccgtga
     1441 agaaatatca ctggggcgga gagcctgtca gcgaaattga tcggcgaacg gtcgtggtaa
     1501 agtgcgctgt cggacacaaa tggctcaatg agccagtcgg tgtagtgtaa ctcgaactta
     1561 tgcgtctcgg tggcgagtgc aatcagatca ctgattccgt agtagctcgc accggcggca
     1621 aactcggtat gaaaggtgag cccgcacaac gtcgtatagc cgccagcgct gccgcccctg
     1681 actgctagcc ttccgtcgtc gacatcgcca cgagcggcaa ggaatttcgc gcccgaaatg
     1741 caatccacga cgtcaatgac accccattgg ccgtaaagcc tttcccggta tttccttcca
     1801 tacccagtgc ttccacgata attcacgtca agaacaccga atccccgact ggtccagaat
     1861 tgcaccgaaa gatcgagcgc cgaatcggtc gcggtggttg gcccgccatg gcttttcacg
     1921 agtagcggag gtctttccga ggccggcgcc cgccagtctg gattgtaggg aggataatag
     1981 aaggcatggg caatttcgcc atcgcctgtt cgaaattcga tcgattgcgg cgtcgaaaag
     2041 tagttctcga attcttgcaa gctggctgat gagaccaaga gcttgatcgg cgaaaccgct
     2101 cccgtgttca catcgacggt cgcgattgcc ggcggcgagg tcatggtggc ataacggatc
     2161 actattgtcg ttgccgtcgc atgcacaccc gacaaggagg aaagttccat cggatagtcg
     2221 tgagcgatca ttg
//
LOCUS       DATILV010000094         1985 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4876581, whole genome shotgun sequence.
ACCESSION   DATILV010000094 DATILV010000000
VERSION     DATILV010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1985)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1985)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1985
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4876581"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..210
                     /locus_tag="VLJ17_02125"
     CDS             <1..210
                     /locus_tag="VLJ17_02125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21808.1"
                     /translation="SQPLVTKFFDCGPATFSDQAVEVHAASPFTSPDDHCPVSWMSIL
                     CDAVPQMSSLNPFPLSLAWRHCWPI"
     gene            256..423
                     /locus_tag="VLJ17_02130"
     CDS             256..423
                     /locus_tag="VLJ17_02130"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: protein motif:HMM:NF012585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HSV21809.1"
                     /translation="MAIKRIGILTGGGDVPGINAVIKSATYRRSENDVEIFGLRRGWD
                     ALTHLNRGREQ"
     gene            complement(434..1636)
                     /locus_tag="VLJ17_02135"
     CDS             complement(434..1636)
                     /locus_tag="VLJ17_02135"
                     /EC_number="2.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012494593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HSV21810.1"
                     /translation="MRAFATLDDADIKNKRVLVRVDLNVPVVGGKVTDRTRIERIAPT
                     IIELVDKGGKVILLSHFGRPSGHDPKQSLKLLVPAIADVLKRPVAFAEDCIGKEATAA
                     VAAMNPGDIVCLENTRFHVGEEENDPDFVAKLAALGDIFVNDAFSVAHRAHASVEGLG
                     HKLPSYAGRTMQAELEALTKVLETPSPPLAAIVGGAKVSTKLGLLRNLLARVNVLIIG
                     GGMANTFLAALGHNVGRSLCEYDLLSTAREIMAHAEAKGREIVLPVDAVVAQKLEANV
                     QSRVVSVNEIGAFDMILDIGPRSVQRVISVLAQAKTLVWNGPFGAFEVKPFDQGTIEV
                     AKATAELTEAGKLVSVAGGGDTVAALNSAIVAERFTYVSTAGGAFLEWLEGKALPGVE
                     MLAANRCP"
     gene            complement(1685..>1985)
                     /locus_tag="VLJ17_02140"
     CDS             complement(1685..>1985)
                     /locus_tag="VLJ17_02140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate binding protein"
                     /protein_id="HSV21811.1"
                     /translation="LTTDRVGISILAVGARLPTISGQREFVDVGTLISYGPNFPDLFR
                     RAGDFVNKILRGAKPADLTIEQPTKFDLVVNLTTAKALGLTMPRNVLAVANEVIE"
BASE COUNT          424 a          591 c          547 g          423 t
ORIGIN      
        1 tcgcagccgc ttgtgaccaa gttttttgac tgtggaccag ccactttctc agatcaagcg
       61 gttgaagttc atgcagcatc gccttttact tctcccgatg accattgccc agtatcttgg
      121 atgtcgattt tgtgcgatgc cgttccacaa atgtcatcac tcaacccatt cccgctttca
      181 ttggcttggc ggcactgttg gccgatctga ctcattaacg ttggcggaag cgcgcatgtt
      241 gctgaggagc agctaatggc tataaagcgt atcggtattc ttaccggtgg cggcgatgtt
      301 ccgggcatca acgccgtaat caagagcgct acctaccgta ggagcgagaa cgacgtcgag
      361 atttttggtc tccgtcgtgg ctgggacgcg ctcacgcatc tgaatcgagg acgcgagcag
      421 taggttgcaa tgtttacggg caacggtttg cggcgagcat ctctacacca ggcagggcct
      481 taccctccag ccattccagg aaggcgccgc cggcggtcga aacataagta aatcgctcgg
      541 ccacaatcgc gctattaagg gccgcgaccg tgtccccgcc gccggcgacc gagacgagct
      601 tgccagcctc ggtcagctct gccgtcgctt tcgcgacttc aattgtaccc tggtcgaatg
      661 gcttcacctc gaaggcgccg aacggcccgt tccacacaag cgtcttcgcc tgcgctaaca
      721 ccgaaataac acgctgtacg ctacgagggc cgatatcgag aatcatatcg aaggcaccaa
      781 tctcattcac ggagacgacc cgcgactgga cgtttgcctc caatttctgt gccaccacgg
      841 cgtcaaccgg aagcacgatc tcgcggcctt tcgcctccgc gtgagccata atctctcgcg
      901 ccgtggagag gagatcgtac tcacacagcg atctaccgac attatgaccc agtgcggcca
      961 agaacgtgtt cgccattccg cccccaataa tgaggacgtt cacccgggcc aaaagattgc
     1021 ggagcaggcc aagcttggtg gagaccttgg cgccgcccac gatcgccgcg agcggaggac
     1081 tcggcgtctc cagcactttg gtcagcgcct cgagttcggc ttgcatggtg cggccagcat
     1141 agctgggcag cttgtggcca agcccctcga ccgaggcatg cgcgcgatgc gccaccgaaa
     1201 aggcatcatt gacgaaaatg tcgccgagcg ccgcgagctt cgcaacgaaa tcaggatcgt
     1261 tctcttcctc gcccacatga aaccgagtgt tttccaggca tacgatgtcg ccagggttca
     1321 tagcggcgac cgctgcggtt gcttctttcc ctatgcagtc ctcagcgaag gcaaccggcc
     1381 gcttcaggac gtcggcaatc gccgggacca acagcttgag tgactgcttg ggatcatgtc
     1441 cgctcgggcg accgaaatgg gagagcaaaa tgactttgcc tcctttgtcg accaactcaa
     1501 tgatagttgg ggcgatacgt tcgatacggg tcctatcggt gaccttgccg cctacgaccg
     1561 gtacgttgag gtccacgcgt accagcacgc gtttgttctt gatatcagcg tcgtcaagcg
     1621 tcgcaaacgc tctcatgctc gcctctcccg aagacggcac caaccaatac cagagttggc
     1681 aaagttattc gatcacctcg ttggcgaccg cgagtacgtt ccgcggcatg gtaagaccga
     1741 gcgctttggc ggtcgtgaga ttgacgacga gatcgaattt cgtcggctgc tcaatcgtaa
     1801 ggtcggctgg cttggctcca cgcagaatct tattgacgaa atcgccagct cgtcgaaaca
     1861 ggtccggaaa attgggaccg taggagatca aggtacccac gtcgacaaat tcccgttggc
     1921 cagagattgt cggaagtctt gcgccaacag ctaaaatgct aataccgacc cgatcagtgg
     1981 tgagt
//
LOCUS       DATILV010000095         2554 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2322238, whole genome shotgun sequence.
ACCESSION   DATILV010000095 DATILV010000000
VERSION     DATILV010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2554)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2554)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2554
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2322238"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..543
                     /locus_tag="VLJ17_02145"
     CDS             <1..543
                     /locus_tag="VLJ17_02145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21812.1"
                     /translation="TAAAKKKPRRHKAKATPAADAGEASTSGMAMPAKKTGRCDPTQQ
                     EQTDLSGTYAGKVKHGDEPVQDATLTVTGNNFTMTSGSDTHSGRITAVTTCGYTAVTV
                     MMGDLTPPPPGPNPPAALPAMSLRAKKVGDSLTLTSVPGEPKKVWFTTGGGMAKHAPR
                     KHKSKAKTTTGTPPPPPPQQ"
     gene            691..2058
                     /locus_tag="VLJ17_02150"
     CDS             691..2058
                     /locus_tag="VLJ17_02150"
                     /inference="COORDINATES: protein motif:HMM:NF018938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyclic terpene utilization AtuA family protein"
                     /protein_id="HSV21813.1"
                     /translation="MREKIRIAAGQGFWGDLPDAPVRQVEGGPIDYLMLDYLAEVTMS
                     ILQKQKARDPNAGYARDFVPLMKQILPACVERNIRVTANAGGVNVEGCAKAVRDVAIE
                     LGLAGKLRIGIVTGDDIMGKLDELLSRGVELRNMDTGAGLSNVRERIQSANVYLGAAP
                     MVEALDRGAQIVITGRATDTGLTLAPLMHEFGWAPDDWNRMAAGTIAGHIIECGAQCT
                     GGNCQYEWRSIPSLANVGFPIVEAAPDGTFVVTKHEGTGGWVIIPSIKEQLVYEMGDP
                     HSYITPDCSADFTTVRLEYEGRDRVRVFGIEGRPATDTFKVSISYSAGYKAVGTLVYS
                     WPEAYDKARAADRILRARLDRLGLKFDQILTEFVGANATHGPLAGEPPADLPEVQLRV
                     GVRSENRSAVEKFTKEIAPLVLTGPPGVTGFAGGRPKVEEIVAYWPALIPKSEITSHV
                     EVIEV"
     gene            2111..2470
                     /locus_tag="VLJ17_02155"
     CDS             2111..2470
                     /locus_tag="VLJ17_02155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21814.1"
                     /translation="MSDGKKMQIQLTKLAHARSGDKGDTANIGLIALHDDFYPLLVRE
                     VTAARVKEHFRGICKGEVERFELPNLGALNFLLHESLGGGGTLSLMTDAQGKTFSTAL
                     LRMKIDVPDEEAKTLGL"
BASE COUNT          574 a          689 c          786 g          505 t
ORIGIN      
        1 acggccgccg cgaagaagaa accgcgtcga cacaaagcca aggccacacc cgctgcggac
       61 gcaggcgaag cgagtacttc cggaatggct atgccggcca agaaaaccgg ccgttgcgat
      121 ccgacgcaac aggagcagac cgatctatcc gggacgtatg ccggcaaggt caagcatggc
      181 gatgaaccag ttcaggatgc gacgctgacg gtcacgggca ataactttac gatgacctct
      241 ggctcggaca cgcattcagg acgcatcacg gcggtcacga cgtgtggcta taccgcagtc
      301 accgtaatga tgggtgacct gacgccgcca ccgccagggc cgaatccgcc agccgccctt
      361 ccggcaatgt cgctgcgcgc caagaaggtg ggcgacagct taaccttgac gagcgtgcct
      421 ggcgagccga agaaagtttg gttcacaacg ggcggtggca tggcgaaaca cgcgccacgg
      481 aaacataagt cgaaggccaa gacgacaacg ggcacgccgc cgcccccacc gccgcagcag
      541 tagtctgagt ccgcagagtc gaacgagaca cgggaacacg gcgagacaga tttgaagctg
      601 ttgcagggtc cgaaagtatg atcgccaatc tgtccgcgct gggtcttccc gtgtcttctt
      661 ctgtaaacta gccaaacgcg atccagcaaa atgagagaga agattcgtat tgccgcgggc
      721 cagggtttct ggggcgatct gcctgatgcg cccgtgcgcc aggtcgaagg cggtcccatc
      781 gattatctga tgctcgacta tctggctgag gttacgatgt cgatcttgca gaaacagaag
      841 gcgcgtgatc ccaatgccgg ttacgcgcgc gacttcgtgc cgctgatgaa gcagattctc
      901 ccggcctgcg tggaacgcaa tatccgggtt acggcaaatg cggggggcgt caacgttgag
      961 ggttgcgcga aagcggtgcg agacgtcgct atcgagcttg gcctggcagg caaacttcgc
     1021 attggcattg ttaccggcga cgacatcatg gggaaactgg acgaactcct cagccgtgga
     1081 gtcgagctac gcaacatgga cactggcgcc gggttgtcta acgtgcgcga acgaattcaa
     1141 agcgcgaacg tctatctggg cgcggcgccg atggtggagg ccctggatcg cggcgcgcag
     1201 atcgtgatta ccggccgggc cacagacacg ggtttgacgc ttgcgccgct gatgcacgag
     1261 tttggctggg caccggatga ctggaacaga atggcggccg ggacgattgc cggccacatc
     1321 attgaatgcg gcgcgcaatg cacgggtggt aactgtcagt atgaatggcg cagcattccg
     1381 agtctcgcca atgttggttt tccgatcgtc gaggccgcgc ctgacggcac cttcgtcgta
     1441 acaaaacatg aaggcaccgg tggctgggtg attattccgt caatcaaaga acagttggtt
     1501 tacgagatgg gcgatccgca ttcctacatc acgcccgatt gctcggcgga ctttactacc
     1561 gtgcgtctcg agtacgaggg tcgcgatcgt gttcgtgtat tcggcatcga gggacggccg
     1621 gcaaccgata ctttcaaggt gtcgataagt tattcagccg gctacaaagc tgtgggcaca
     1681 ctcgtctact cgtggcccga ggcttatgac aaggcacggg ccgcagacag gatactgcga
     1741 gcacgcctgg atcggctggg attgaagttc gatcaaatcc tgacggaatt tgtgggcgcc
     1801 aatgcgacac atggcccgct ggctggtgaa cccccggctg acttgccgga agttcaattg
     1861 cgcgtcggcg tgcgcagtga aaatcggtcc gcggtagaga aattcaccaa agagatcgcg
     1921 ccactggtat tgaccgggcc accgggtgtg actggttttg ccggaggccg gccaaaggtt
     1981 gaggagatcg ttgcttactg gccggccctg attccaaaga gtgagatcac ttcgcatgtt
     2041 gaggtaatcg aagtgtagtt gaaggatatc tttggccttc ctctgtcggt acagagaggt
     2101 ccaccgagaa atgagtgacg gaaagaagat gcaaattcaa ttaaccaaac ttgctcacgc
     2161 gcgttccggc gataagggcg ataccgccaa tatcggcctt atcgccttgc acgatgattt
     2221 ctatccgttg ctggttcgcg aagtgactgc cgcacgcgtc aaagaacatt tccgagggat
     2281 ctgcaaaggt gaagttgaac gatttgaatt gccgaatctc ggggcgctca attttctcct
     2341 gcatgaaagt ctcggcggcg gcggcacgct ttcgctgatg accgatgcgc agggaaagac
     2401 attttccacc gctctcctcc ggatgaaaat tgacgttcct gacgaggaag caaaaactct
     2461 cggactttaa gtgctgattc ggctcgccgg tcggtgttat cccaatgaag cctgagcgcg
     2521 agtttgccat caaacatggt ttcgcagatg ttgg
//
LOCUS       DATILV010000096         1882 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1811045, whole genome shotgun sequence.
ACCESSION   DATILV010000096 DATILV010000000
VERSION     DATILV010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1882
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1811045"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..693
                     /locus_tag="VLJ17_02160"
     CDS             <1..693
                     /locus_tag="VLJ17_02160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HSV21815.1"
                     /translation="FGAQTILSGISLDVMRGEVICIIGPSGAGKSTLLRCINALVPID
                     RGSILVAGQEVHDAKLDKIALRRKVGMVFQQYNLFPHRTALENIMMAPIHVLKRDRAE
                     VDVLARALMRKVRLEGKEGFYPGELSGGQQQRVAIARSLAMQPDAMLFDEVTAALDPE
                     TVKEVLVAIRELAEDGMTCVIVTHEMGFAREVADQIYFTDRGVVVEHGPPAEFFTQCR
                     DDRTRQFLSQIL"
     gene            1128..>1882
                     /locus_tag="VLJ17_02165"
     CDS             1128..>1882
                     /locus_tag="VLJ17_02165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSV21816.1"
                     /translation="MELLRRQFLQLAASAAALPSLSRTARAQTYPTRPVRLIIGYVPG
                     GSADVTARLMGQWLSERLGQPVIVESRPGAGSNIGTEAVVRAPADGYTLLLVAPANAI
                     NASLYDKLNYNFLRDIVLVAGLIRFPNIMEVNLSVPVKTVPEFIAYAKANPGKINMAS
                     SGNGSTIHMSGELFKMMTGVDMVHVPYRGAAPALTDMMGGRVQVMFDNVPTSLEFIRT
                     GKLRPLAVTGATRSEVLPDLPTVADFVPGYEASA"
BASE COUNT          358 a          589 c          582 g          353 t
ORIGIN      
        1 tttggcgcac agacaatctt gagcggcatc tcgctcgatg tgatgagggg cgaagtgatc
       61 tgcatcatcg gcccttcggg tgccggcaag tcgaccctgc tccgttgcat caatgcgctg
      121 gtaccgatcg atcgcggctc aattctggtc gcgggccagg aagtgcatga tgccaagctc
      181 gacaagattg cgttgcggcg caaggtcggc atggtgtttc agcaatacaa tttgtttcct
      241 caccgcaccg ccctcgaaaa catcatgatg gcgccgatcc atgtgcttaa gcgcgatcgc
      301 gcggaagtcg acgtcctggc ccgtgcgctg atgcgaaagg tccgccttga gggcaaggaa
      361 ggtttctatc ccggcgagct ttccggcggc caacaacagc gcgtcgccat tgcgagaagc
      421 cttgcgatgc agcccgatgc catgctgttc gacgaggtta cggctgcgct tgatccggaa
      481 accgtgaagg aagttctggt tgctatccgc gagctcgccg aggacggcat gacctgcgtc
      541 atcgtcaccc acgaaatggg ctttgcccgc gaagtcgccg accagattta tttcacagac
      601 cgcggcgtgg tggtcgagca cgggccacca gcggaattct tcacccaatg ccgcgacgac
      661 cgcacgcggc aatttctcag tcagatacta tgatcaccat gcaataaacc attggcacaa
      721 tgatgggcga aggcggtcaa gttttccggg gaagccgcaa tttctgggac cgatgaccgc
      781 ttcgcgtcat caaccgccga gcggtcgggc ctcgccgcgt ggccgcagta ccttcagcac
      841 cggacgcatg gctcgtgggg gccgatagcc ggctagactc gtgacgctgc gcggcgggtt
      901 cacccaagta actggccgtc ctggccgact gccagctcgg cggccttggg ccagggcaca
      961 acagcggtgg tcccaaccac ctcgacaccg actgggcagc gtcgccacgg ccgttccgag
     1021 tgagcaatct tatacagacc ccgcagactg aaggcgccta agttcgcttg ggctaagccc
     1081 ggctaagccg cagtattttc agcactacca tttcaaaggg agccgatatg gaacttctcc
     1141 gtcggcaatt tctgcaactg gcagcgagcg ctgccgcgct cccgtcctta tcgcggaccg
     1201 cgagggcgca gacctatccg acgcggccgg tgcggttgat catcggctat gtccccggcg
     1261 gctcggccga cgtcaccgcg cgcctgatgg gtcaatggct ctcggagcgg ctcggccaac
     1321 cggtgatcgt cgaaagccgg ccgggcgcgg gcagcaatat cggcaccgag gcggtagtgc
     1381 gcgcgccggc ggatggctac acgctcctgc tggtcgctcc agcgaacgca atcaatgcga
     1441 gcctctatga caagctcaac tacaatttcc tccgcgacat agtgctggtc gcaggcctca
     1501 tccgctttcc caacatcatg gaggtgaatc tatcggtgcc ggtgaagacg gttccggaat
     1561 tcatcgctta tgccaaggcc aacccgggca agatcaacat ggcgtcgtcc ggcaacggct
     1621 ccacgatcca tatgtccggc gagctgttca agatgatgac cggcgtcgac atggttcacg
     1681 tgccctatcg cggcgcggcg ccggcgctga ccgacatgat gggcggacgg gttcaggtga
     1741 tgttcgacaa cgtcccgacg tccctcgagt tcatcaggac cggcaagctg cggcccctgg
     1801 cggtgaccgg cgcgacgcga tcggaggtgc tgccggactt acccaccgtg gccgatttcg
     1861 tgccgggcta cgaggcgagc gc
//
LOCUS       DATILV010000097         2758 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_789629, whole genome shotgun sequence.
ACCESSION   DATILV010000097 DATILV010000000
VERSION     DATILV010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2758)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2758)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2758
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_789629"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..531)
                     /locus_tag="VLJ17_02170"
     CDS             complement(<1..531)
                     /locus_tag="VLJ17_02170"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HSV21817.1"
                     /translation="MAHAPKSPLTAAREEASKIPLADLDVVILCGGQGTRLREETEIK
                     PKPMVEIGGRPILWHIMKIYSHFGVRNFILCLGYKGEIIRDHFLNYRHNRSDLAVDLH
                     TNSVEVLGNAPLEDWRIILADTGEATQTGARIRMVTKYLRHDRFLATYGDGVCDIALD
                     ALYKRHITGGCQATVTA"
     gene            complement(542..1984)
                     /locus_tag="VLJ17_02175"
     CDS             complement(542..1984)
                     /locus_tag="VLJ17_02175"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSV21818.1"
                     /translation="MVRFSIVLTTTDRPELLPAAVRAVLEMEFQDFELLVSDNFSRIP
                     AAKILADVQDKRLRIIRTDRRLPVTDHWEFVWEYIRGEYVMYLGDDNALHPTILTFAD
                     RAIRDYDLDILSWRVCLYFHPDWDIEYEALPNQGNILGFDPGTTHQLYECRSEAVLKK
                     FCSDIRASGCFPCMLNFLFRKSAADMIRKRTGRLFWAPNPDISSSYLMLGVIRPGRYA
                     FFDGFGGIGGRSRNSNLASLLSRGKASTKAREYVTEFRGQDLLPLHEPKFVAMANSLA
                     ATISQAKTLMPDYFKRFDFDRTKLARETIDDIYVHRNQPWIDDLDFLAEVDRFIDSLP
                     AADAIEVFRYRDERLAEVQKSNNAGPGGKNYVRNYEEARVSLLDFWQKADSKDKAFAW
                     RLFRETGRNPLGRYWNFGVTTYVDMALFGGRDIADAARKLPHILAAFDRDRGQFADYY
                     EQIGILGKVLGAEPQECSSATVAESMVEAL"
     gene            2250..>2758
                     /locus_tag="VLJ17_02180"
     CDS             2250..>2758
                     /locus_tag="VLJ17_02180"
                     /inference="COORDINATES: protein motif:HMM:NF020013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HSV21819.1"
                     /translation="MMPIVPAEITEITGCRACGSAPLESVLSLGRSPLANALEQPDIR
                     KPPQPRYPLEVLRCPACSLVQLSISIAPEILFDEYVYLSSISDAFLSHARALVERVVS
                     TRNLDGTSLVVEVASNDGYLLQHYREPGIPVLGIEPARNIARIAREQRGIDTIEEFFG
                     RDLAERLVS"
BASE COUNT          621 a          758 c          758 g          621 t
ORIGIN      
        1 cgccgtcacc gttgcttggc atcctcccgt aatgtggcgc ttgtacaatg cgtcaagcgc
       61 aatatcgcag acaccgtcgc cataagttgc caggaagcgg tcgtgtcgta gatacttcgt
      121 gaccatccga atgcgtgcac cagtctgagt cgcttctccg gtgtcggcga gaatgatccg
      181 ccaatcttca agcggcgcgt ttcccaggac ttcaaccgag ttggtatgca aatcgacagc
      241 gagatccgat cgattgtggc gatagttgag aaaatgatcg cgaatgatct cgcccttata
      301 accaaggcag aggataaaat ttcgcacgcc gaagtgcgaa tagattttca tgatgtgcca
      361 caggatcggt cgcccaccga tttccaccat cggttttggt ttgatttcag tttcctcacg
      421 taatcgcgtc ccctgtcctc cacagaggat gacgacgtca agatccgcaa gcggaatctt
      481 cgatgcttcc tcccgggcgg cggtcagtgg tgattttggt gcgtgtgcca tcgtcggata
      541 tctacagggc ttcaaccatg ctctcggcaa cggtggcaga cgagcattct tgcggctcag
      601 ccccgagaac tttgccgagt atgccgatct gttcgtagta atcagcaaat tggccacggt
      661 ctcgatcgaa ggccgccaat atgtgaggca atttgcgcgc ggcatcggca atgtcgcggc
      721 caccgaaaag cgccatatcc acgtaggtcg ttactccgaa attccaatac cggcccaacg
      781 gattgcggcc ggtctcgcgg aacaaacgcc aggcgaatgc cttgtctttt gaatccgctt
      841 tctgccaaaa atcgaggagc gatacgcgtg cctcctcgta gttgcgcaca taattttttc
      901 cacctgggcc ggcgttattc gacttttgta cctccgccag gcgctcgtct cgatagcgaa
      961 acacctcaat ggcgtcggca gcgggaagcg aatcgatgaa ccgatccact tcggcaagga
     1021 agtcgaggtc atcaatccac ggctgattgc gatgaacgta aatatcatcg atggtctcac
     1081 gggcgagttt cgtgcggtcg aaatcgaagc gtttgaaata atcaggcatg agagtcttcg
     1141 cctgcgagat ggttgccgcc aacgaattgg ccatcgccac aaatttcggc tcatgcagcg
     1201 ggagcaggtc ctgaccgcga aattccgtca cgtattcgcg ggccttcgtg cttgcctttc
     1261 cgcgcgacag caatgatgca agattcgaat tccgtgagcg gccgccgatg ccaccgaacc
     1321 cgtcaaagaa ggcgtaacga ccgggacgga tcacgccaag catgaggtag ctcgatgaaa
     1381 tatcgggatt gggtgcccaa aagagccgcc ccgttcgctt gcggatcatg tccgcagcag
     1441 atttgcggaa caggaaattg agcatgcagg ggaagcagcc ggaagctcga atatcactac
     1501 agaatttttt caggaccgcc tcggagcgac actcatagag ctgatgcgtc gttccgggat
     1561 caaatcccaa tatattgcct tggttaggca atgcttcata ttcgatgtcc cagtccggat
     1621 ggaaataaag acagacgcgc cacgacaaga tgtccaggtc ataatccctg atcgcgcggt
     1681 cggcgaatgt aagaatggta ggatgcagag cattgtcgtc gccgaggtac atcacgtact
     1741 cgccccggat gtactcccaa acaaattccc aatggtcggt taccggaaga cggcgatcag
     1801 tacgaatgat gcgcagccgc ttgtcttgca catccgccag aattttggcc gcgggaattc
     1861 gtgagaaatt atcagaaacc agaagctcga aatcttggaa ctccatttcc agtacggctc
     1921 ggacagctgc cggcaatagc tccggtcgat cggtggtggt caagacaatg gaaaaacgca
     1981 ccatcaatgc accaaactca cgcgtcaggt agcgaagccg tacaactcat agcttcccat
     2041 gaattcttgg gaaagcaaag tcttcagttt tgcagcaagc ggccgagcag atttggcttc
     2101 gcgcagacag tccgagcagc ggatttgagt gcaggacatc agttgtactc cggatgagcc
     2161 atagtgtacg ctgagttcta tcctgtttct cgacgaagga gcgctgatcc gttggcggat
     2221 gcgcagtgcg gtggcgacgc gatgatcaga tgatgccgat tgtgcccgcc gagattaccg
     2281 aaattaccgg ttgtcgtgcg tgcgggtccg cgccacttga atccgtcctt tcgctcgggc
     2341 gatctccgct ggccaacgcc ctcgagcagc ccgatatacg caaaccgccg cagccccgtt
     2401 atccgctgga agtcttacgt tgtccggcct gcagtctcgt tcagctatcg atttcgatcg
     2461 cgcccgaaat cttgttcgat gagtacgtct atttgtcgtc catctccgat gcgtttttgt
     2521 cgcatgcgcg cgcactcgtt gagcgcgttg tcagcacgcg taatttggat ggtacatctc
     2581 tcgttgtcga ggtagccagc aacgacggat accttttgca gcattatcgc gagccgggga
     2641 taccggtgct gggcatcgag cccgcccgca atatcgcccg cattgcgcgt gagcaacgcg
     2701 gtatcgatac gatagaggag ttcttcggcc gcgaccttgc tgaacgcttg gtgtccga
//
LOCUS       DATILV010000098         1617 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4110662, whole genome shotgun sequence.
ACCESSION   DATILV010000098 DATILV010000000
VERSION     DATILV010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1617)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1617)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1617
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4110662"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1569
                     /locus_tag="VLJ17_02185"
     CDS             <1..1569
                     /locus_tag="VLJ17_02185"
                     /inference="COORDINATES: protein motif:HMM:NF013799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HSV21820.1"
                     /translation="HGKLTLVSTMLQAAQAKGLTTAAVGKFGAAFIQDYKRGGIILDE
                     DAAVPLGFAKELQQAGYPLPRNSGNAYAAGALTLAKDNGDPTAPIPIQRLKDGQTANP
                     LDRTGALSRRGFTYLTDVFVDYILPNKKPHLTIFWSKEPDATNHAYGPGAFNSIDATR
                     MNDEILGRVMAKIRQLGWEQSTDIIITQDHNHSTVSGDVAHFPLRSIVDRGVGPHDPH
                     GHSVSGFVRTAELLTRDGLKAYDGAGCRDIPILSGIMFDGTHLQPNKDDQHGNVCGLA
                     QKYTSPAYLVPKPIPAGAIVVAANAGSDYLFVPDGNIGTVKAAVASLQGRLQFGAIFV
                     SDKYGEVAGTLPMSLIKTENSGNGRAPDIIVSFNFDDNVAVAGKTGISYASSVNRRGD
                     HGSFSQTDTHISLLAHGPDFKSGLYDTLPTANVDIAPTVAHILKFSMPGVQGRVLEEA
                     LQGGPRVTEYAVLNKMHRSSTKTGLTMKLPTDLDGRSNDPSLTTYAVELKTKVLTRGG
                     KSYTYFDHAKAIRE"
BASE COUNT          353 a          500 c          476 g          288 t
ORIGIN      
        1 cacggcaagc tcacgcttgt ttcaacaatg cttcaagccg cacaagccaa agggctgacg
       61 acagcggctg tcggcaagtt cggcgccgcc ttcatccagg attacaagcg cggcgggatc
      121 attctcgacg aagacgcggc ggttccgctt ggtttcgcca aggaattgca acaggccggg
      181 tacccgcttc cgcgaaacag cggcaatgcg tatgcggcgg gtgcgttgac gctcgccaaa
      241 gataacggcg atccgacggc tccgattccc attcagcgac tcaaggatgg gcagaccgct
      301 aatcccctcg accgcaccgg agcgctttcc cggcgcggct tcacctacct gacggacgtt
      361 ttcgtcgatt acattctgcc gaacaagaag ccgcacttga ccatcttctg gtcgaaggag
      421 ccggatgcga ccaatcatgc gtatggaccg ggggccttca attcgatcga tgcgaccagg
      481 atgaatgacg agatcctggg ccgagtcatg gcgaagatcc gccaacttgg ttgggagcaa
      541 tccaccgaca tcatcatcac tcaggatcac aatcacagca cggtttccgg tgacgttgcg
      601 cattttccat tacgatcaat tgtcgatcgc ggcgtcggac cgcatgatcc gcacggccac
      661 tcggtctcag gattcgtgcg gaccgccgag ctgctgaccc gggacgggtt gaaggcttat
      721 gatggcgcgg gctgccgcga cataccgatc ttgtcgggta tcatgttcga tggcacgcac
      781 cttcagccca acaaggatga ccagcacggc aacgtttgcg gcctggcgca aaaatacacc
      841 tcgccagcct atttggtccc gaagccgatt ccggcggggg ccatcgtcgt ggccgcgaac
      901 gcgggcagcg actatctgtt cgtcccggat ggcaatatcg gcaccgtcaa ggctgccgtg
      961 gcgagcctgc agggccgcct gcaattcggc gcgatcttcg taagcgacaa gtatggcgag
     1021 gtcgccggga cgctccccat gagcctcatc aagaccgaga acagcggcaa cggccgggcg
     1081 ccggacatca tcgtcagctt caacttcgat gacaacgtag ctgtggccgg aaaaaccggc
     1141 atcagctatg ccagctcggt caaccgcaga ggtgatcacg gcagcttctc gcagaccgac
     1201 acgcacattt cattgttggc acacgggcca gactttaagt cgggtcttta cgacacgctg
     1261 cccacggcga atgtggacat cgcgcctacc gtcgcgcaca tcctcaagtt cagcatgccg
     1321 ggcgttcagg gacgcgtgct cgaggaagcg ctgcagggcg gaccgcgcgt cacggaatac
     1381 gcggtgctga acaagatgca ccggtcctca acaaagactg ggttgacgat gaagctgccg
     1441 accgacttgg acggccggag caatgatccc agcctgacga catatgccgt cgagctaaag
     1501 accaaggtgc tcacccgcgg cggcaagagc tacacttact tcgatcacgc caaggccatc
     1561 cgcgagtaac cggcgacagc atggtgctgg aggcatcgga ttgccgccag accaaca
//
LOCUS       DATILV010000099         5147 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3599275, whole genome shotgun sequence.
ACCESSION   DATILV010000099 DATILV010000000
VERSION     DATILV010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5147)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5147)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5147
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3599275"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1261
                     /gene="dnaA"
                     /locus_tag="VLJ17_02190"
     CDS             <1..1261
                     /gene="dnaA"
                     /locus_tag="VLJ17_02190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HSV21821.1"
                     /translation="HYVERLLNCWQSERPAVTRIDLSVRSAMIRSAPPCAVISPAAVG
                     HLEKREINQFRHEIKSISTSSPVVQDSRGGSPLDPRLTFESFVVGRSNTLAHAASKQV
                     ATARRGDSVMFNPLYIHAGVGLGKTHLLQAVALKINSSGERNALYLTAERFMYGFASA
                     LRSQTALAFKDALRGIDVLVVDDLQFLQGKNSQAEFSHTLNSLIDGGRQVVVAADRPP
                     TELESLDERIRSRLAGGLVVEIGLLGEELRLEILSARVQAARAHHPGFDVPAPVLGYI
                     ARTVTHNGRDLEGALNRLLAHSKLTGQPITMELAERELRDLVRPLELKRVRIEEIQRI
                     VARHYNVSRSDLLSSRRTANVVRPRQIAMYLAKTLTLRSLPEIGRRFGGRDHTTVLHA
                     VRKIETLIGTDNALAAEIEALKGQLQE"
     gene            1463..2581
                     /gene="dnaN"
                     /locus_tag="VLJ17_02195"
     CDS             1463..2581
                     /gene="dnaN"
                     /locus_tag="VLJ17_02195"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HSV21822.1"
                     /translation="MRVTIERADLLKSLSHVHRVVERRNTIPILGNVLLRAQSADLSL
                     KATDLDLEVVETIAAEVNSGGVTTVPAHMFYEIVRKLPEGAQIVLEAAGDRAMMSIRA
                     GRSRFTLQTLPDSDFPDLAAGELTHKFALGAADLKRLIDKTQFAISTEETRYYLNGIY
                     LHAVDTGNGLMLRAVATDGHRLAQFELVAPAGAEGMPGVIVPRKTVGEVQRLIDNSVG
                     EITIELSQSKIRLALDGVVLTSKLIDGTFPDYSRVIPLSNDKQLEVDKKEFEQAVDRV
                     STVASERGRAVKLALSAGRLVLSVTNPDSGSATEELEVGYEADPLDIGFNSRYLLDIA
                     AQLEGDTAVLKLADPGSPTLLSDKEAKGALYVLMPMRV"
     gene            2608..3807
                     /gene="recF"
                     /locus_tag="VLJ17_02200"
     CDS             2608..3807
                     /gene="recF"
                     /locus_tag="VLJ17_02200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="HSV21823.1"
                     /translation="MTNAARIGRLTLTNFRSYRAATMAPKTNLVALTGPNGAGKTNVL
                     EAISFLSPGRGLRRAQLDEVTFADGNGEKGDCRRGLYDRARNRFWAVSAEVDGALGLA
                     MLGTGIEPGMTEEAALSRRYRIDREPVASATAFADHLRVVWLVPTMDGLFLGPASERR
                     RFLDRLVLAVDATHASRVSALERALRSRNRLLENRDPDDHWLDAAEHETAEIAVAVAA
                     ARAETVRRLAAALAARREVQGTFPSADISLDGWIEAMVLTRPAVEVEDRYRMALKQNR
                     GRDAASGRTLEGPHLTDLVVQYREKAIAASNASTGEQKALLIGLVLAHAGLVGSMTGT
                     APVLLLDEVVAHLDPDRRAALFDALGQLGSQVWMTGADPIAFVDIASRADVIDVRTIS
                     EARRSPV"
     gene            4081..>5147
                     /locus_tag="VLJ17_02205"
     CDS             4081..>5147
                     /locus_tag="VLJ17_02205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020091680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV21824.1"
                     /translation="MAESARKTDVSDYGAESIKVLKGLDAVRKRPGMYIGDTDDGSGL
                     HHMVYEVVDNAIDEALGGYAKEVTVTLNPDGSCTVRDDGRGIPTDIHSEGVSAAEVIM
                     TQLHAGGKFNQDAYKVAGGLHGVGVSVVNALSSWLRLKIWRDGKEHAMEFRDGDAVAP
                     LAETGPAFERRGTEVTFLPSPRTFTMTEFDWATLEHRLRELAFLNSGVRIVLSDKRHA
                     VEKREEILYEGGVEAFVRYLDRNKTPLVSKPIMVRADRDGIGVECALWWNDGYHEAVL
                     CFTNNIPQRDGGTHLAGFRGALTRQVTSYAEQGGVAKKEKVALTGDDCREGLTAVLSV
                     KVPDPKFSSQTKDKLVSSEVRP"
BASE COUNT          976 a         1554 c         1581 g         1036 t
ORIGIN      
        1 gcactatgtg gagcggctgc tcaactgttg gcaatccgaa cgcccagcgg tgacgcggat
       61 cgacctatcg gtgcgttcgg caatgatccg cagcgcccca ccttgcgccg tcatctcccc
      121 ggccgcggtt ggccatttgg aaaagcggga gatcaatcag tttcggcacg aaatcaaatc
      181 catctccacg tccagcccgg tcgtccagga ttctcggggc ggctcgcccc tcgacccacg
      241 attaaccttc gaatcctttg tggtcgggcg ctccaatacg ctcgctcacg ccgcatccaa
      301 gcaggtcgca acggcacgtc gtggcgattc ggtgatgttc aatcctctct acattcatgc
      361 cggcgtgggc ctgggcaaga cacatctgct tcaggccgtg gcgctcaaga tcaatagttc
      421 gggcgagcgc aacgcgctct atctcaccgc cgaacgcttt atgtacggct tcgcgtccgc
      481 gttgcggagc cagaccgccc tcgccttcaa ggacgcgctg cgcggcatcg acgttcttgt
      541 ggtcgacgac ttacaatttc ttcaaggcaa aaacagccaa gcggaatttt cccatactct
      601 taattcactc atcgacggcg gccgccaggt tgtggtagcg gctgatcgcc cccccaccga
      661 gcttgaaagc cttgacgagc gcatccgttc gcgcctcgct ggcggcttgg tggtcgagat
      721 cggcctgctt ggtgaggagt tacggcttga gattctgtcc gcccgcgttc aggcagcgcg
      781 cgcgcatcat cccggttttg atgtgcccgc gccggttctc ggctacatcg ctcgcaccgt
      841 cacgcataac gggcgcgatc ttgagggcgc gttgaaccga ttgctcgccc atagcaagct
      901 caccggccaa ccaatcacca tggaactcgc cgaacgcgaa ttgcgcgatc tggtgcgtcc
      961 gctggagctt aagcgggtcc gaattgagga gatccaacgt attgtagccc gtcactacaa
     1021 cgtcagtcgc agcgatctat tgtcgtcgcg gcgtaccgcc aacgtggtgc gaccgcgcca
     1081 gatagccatg taccttgcca aaactctgac gttacgttcc ttgccggaaa tcggccgccg
     1141 ctttggcgga cgggaccata cgacggtctt gcatgcagtc cgcaagatcg aaacgttgat
     1201 aggaaccgat aacgcgcttg cggccgaaat cgaggcgttg aaaggccaat tacaggagtg
     1261 acctgcaccg gccggggttg aaaacaccgg gcccctcggg gcccggatcg attccccggg
     1321 gcacccgtgc gggggttttg tccccaccta attgccttgt cgaatcgaca ttgacgaggc
     1381 agtttccgat attgacgccc aggcgccgcc ggtgcaccgc tccggcggcc ggatttatgt
     1441 gcaaaggcaa gcggggttcc gcatgagggt gacgatcgaa cgcgccgatt tgctcaagtc
     1501 gctatcccat gtgcatcgcg tggtcgagcg tcgcaacacg attccgattc tcggcaatgt
     1561 cctgttgcgt gcacagagcg ccgatctctc tttgaaggct accgacctcg atctcgaagt
     1621 cgtagaaacc atagcggccg aggtcaattc gggtggggtt accacggtgc cggcgcacat
     1681 gttttatgag atcgtgcgca agctgccgga aggcgcccag atcgtgctgg aggcggccgg
     1741 cgaccgtgcc atgatgtcga ttcgcgcggg gcgctcgcgg ttcactttgc agacattgcc
     1801 ggacagcgat tttcccgacc ttgcagcggg cgagcttacc cacaagttcg cgcttggcgc
     1861 tgccgatctc aagcgtttga tcgacaaaac acagttcgca atttccaccg aagagaccag
     1921 gtattatctt aacggcattt atctccatgc cgttgatacg ggtaacggct tgatgttgcg
     1981 tgcagttgcg acagacggcc atcgacttgc tcaattcgaa ctcgtggcac cggccggcgc
     2041 cgagggcatg ccgggcgtta tcgttccacg caaaacggtg ggcgaggtgc agcggttgat
     2101 cgacaacagc gtcggcgaaa tcaccattga attgtcgcaa tctaagatcc gcctagcgct
     2161 tgacggtgtc gtcctgacct caaagctgat cgacggcaca ttcccggact atagtcgcgt
     2221 cattccgctc agcaacgaca agcagctcga agttgacaaa aaggaattcg agcaggccgt
     2281 agatcgggtg tcgacggtgg cgagcgagcg cggccgcgcc gtcaagctcg cgctttcggc
     2341 cgggcgattg gtgctgtcag tcaccaaccc ggattccggt agcgctaccg aggaacttga
     2401 ggtcggctat gaagccgatc cgctcgatat agggtttaac tcgcgatacc tactcgatat
     2461 cgcggcccag ctcgaaggcg ataccgcggt gctcaagtta gccgaccctg gctcaccgac
     2521 cttgctctcc gacaaggagg ccaagggtgc actctatgtg ttgatgccga tgcgggtata
     2581 gtgcgcagcg gccaagaggc cgagttcgtg accaacgccg cccgcatagg ccgactaacg
     2641 ctcaccaact ttcgcagcta tcgcgccgcc accatggcgc ccaagacaaa tctggtggcg
     2701 ctcaccggtc ccaacggtgc tgggaagacc aatgtgctgg aggcaatctc gttcctatca
     2761 cccggtcggg ggttgcgccg cgcccagctt gatgaagtca ctttcgcgga cggcaatggc
     2821 gagaagggcg attgcaggcg tgggctttat gatcgtgctc gtaatcgttt ttgggcggtg
     2881 tccgccgagg tcgacggtgc tttagggctt gctatgctcg gtactggcat cgagccgggc
     2941 atgaccgagg aagcggcgtt gtcgcggcgg taccgcattg atcgtgaacc cgtcgcgtcg
     3001 gcgaccgcgt ttgcggatca tttgcgtgtg gtgtggcttg tcccgaccat ggatggctta
     3061 tttctcgggc ctgcatcgga gcggaggcga tttctggatc gcctcgtgct tgcggtcgat
     3121 gcaactcatg cctcgcgggt gtcagcgttg gagcgcgcct tgcgatcgcg caaccggctg
     3181 ttggagaacc gcgatcctga tgaccattgg ctcgatgccg ccgagcacga gaccgccgaa
     3241 attgcggtcg cggttgcggc cgcccgagcc gaaacggtgc ggcgccttgc tgccgctctg
     3301 gcggcgcggc gcgaggtgca aggcacgttt ccgtctgccg atatctcgct cgacggctgg
     3361 atcgaggcga tggtgctgac acgccccgcc gtcgaggtgg aagaccgcta tcggatggcg
     3421 ctcaagcaaa accgtggtcg tgatgctgcc tctggccgca ccctggaagg gccacatttg
     3481 accgaccttg tggtgcagta tcgggaaaag gccattgcgg caagcaacgc ttccaccggt
     3541 gagcagaaag cgctgttgat cggactggtg ctcgcccatg cggggttggt cgggagcatg
     3601 acgggtaccg cgccggtgct tctgctcgac gaggtggtgg cacatcttga tccggacagg
     3661 cgcgccgcgc tcttcgatgc cctcggtcag ctcggatcac aagtgtggat gaccggcgcc
     3721 gatccgattg cgttcgtgga tatcgcgtcg cgcgccgacg tgatcgatgt gcgaacgatc
     3781 tccgaggcgc gtcgatcacc ggtttgagct ccgaagtcgg ctgagctgag gctaacggaa
     3841 aattatcgcg tggtacgatc tcggcggccc agtcttcaca tcgccgtcgc ggttcggggc
     3901 tgattcctac gctgatttcg caccgcggcg acggcccgac aaaacccctg ggctaccctt
     3961 gaaatttcgt tgcaagacaa ccacttaaag catgtcaatt tgcgctgtac gctgccccag
     4021 attcgtgtca caggaagagc cgcgcaagcg tcgcacccca gaaccggacg aaatcctttc
     4081 atggctgaat ccgcccgcaa aaccgacgtt tccgactatg gcgcggaatc gatcaaggtc
     4141 ctcaagggcc ttgatgcggt gcgcaagcgc ccgggcatgt atatcggcga taccgatgat
     4201 ggttccggcc tgcaccacat ggtctatgaa gtggtcgaca atgcgatcga tgaggcgctc
     4261 ggcggctacg ccaaggaggt caccgtcacg ctcaatccgg acggttcgtg cacggtacgc
     4321 gacgatggcc gcggtattcc gaccgacatt cacagcgaag gggtatcggc cgccgaagtg
     4381 atcatgaccc agcttcacgc cggcggcaaa ttcaatcagg acgcatacaa ggttgcaggc
     4441 ggcctgcatg gcgtcggcgt ttccgtcgtc aatgcgctgt cgagctggct caggcttaag
     4501 atctggcgtg acggcaagga acacgccatg gagtttcgcg acggcgacgc cgtcgcgccc
     4561 ttggccgaga ccgggccggc cttcgaacgg cgtggcaccg aggtaacgtt cctgccgtcg
     4621 ccccgaacct tcaccatgac ggagtttgat tgggcaacgc tggaacatcg tttgcgcgag
     4681 cttgcctttc tcaactcagg cgtccgcatc gtgttgtcgg acaagcgtca tgccgtcgag
     4741 aaacgcgagg aaattctcta tgagggcggt gtcgaggcct tcgtgcgcta cctcgaccgc
     4801 aacaagactc cgctcgtttc caagccaatt atggtcaggg ccgatcgcga cggtatcggc
     4861 gtggagtgcg cgctgtggtg gaacgacggc tatcacgagg ccgtgctctg cttcaccaat
     4921 aatatcccgc agcgcgacgg cggcacgcat ctcgccggtt ttcgcggcgc tctgacccgc
     4981 caggtgacca gctatgccga acagggcggg gtcgcaaaaa aagaaaaggt cgcactcacc
     5041 ggagacgact gccgtgaagg ccttacggcc gtcttgtccg tcaaggtacc ggacccgaag
     5101 ttttcctcac agaccaagga caagctggtt tcctccgagg tgcgtcc
//
LOCUS       DATILV010000100         2351 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2578892, whole genome shotgun sequence.
ACCESSION   DATILV010000100 DATILV010000000
VERSION     DATILV010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2351)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2351)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2351
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2578892"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2351)
                     /locus_tag="VLJ17_02210"
     CDS             complement(<1..>2351)
                     /locus_tag="VLJ17_02210"
                     /inference="COORDINATES: protein motif:HMM:NF028467.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HSV21825.1"
                     /translation="RLGALLVLACGYLFSALIIIPHALTFPGAFSPTGLLGAGLQTTA
                     SLYWFWHLLFPVALLGYGLMRDENPDPAPAQPSLLAVIVRGIALVLVLVCGLTLLATA
                     GNDYLPPLFADRVDFTPAARLAAATTMLTSASAVAVLWLRRRSLLDEWLMIVALAALL
                     EMALGAMFVSERFSLGFYAGRAFSLLTSTIVLVVLLAETTRLYANVTRSNEGKIRCLV
                     DANILGICISNLEGAIVEANEAFLRMLQFSREDIASRRLRWTDLTPADWREQSERAVA
                     ELRSTGTFHPVEKEYFRKDGSRVPVLIGGALFEKSRNEGVVFVLDLTELKSAEQAVRN
                     SERKLRQFVESVPCHFWSANPNGEPTYVNRRLLDYFGMRFEDQKSSDWQAVLHPDDVP
                     ETERALYYAFRTGESFQRVHRLRRADGEYRWHRARAEPQRDHSGNNIQWYGFSIDIDE
                     GKKAEDALRESERSLRSAIDGIAGLIAILAANGEFETVNRQLFEYCSRSWEELQNWAT
                     NDIVHPEDLPRILELFKRSIAAGIPFQFELRLRRFDGDYRWFENRIVPIRDDSGRIIR
                     WYALLVDIEDRTRALERLQQLQSDFAHMNRVNMMGELAASLSHEITQPIASARNNARA
                     AQNFLHKQTSDLREVEETLDCVVADADRAGDIVDRIRDHIRKAPPRKALCDLNAAINE
                     VVVLARSPIVQNGVSVQSRLAEGLSPVHGDRVQLQQVVLNLILNAVEAMGSTSKAGAR
                     ELLISTEQDHNCILVAVCDSGPGIDPAHFERVFDAFYTTKPKG"
BASE COUNT          521 a          676 c          679 g          475 t
ORIGIN      
        1 accctttggc ttggtggtgt aaaatgcatc gaacacgcgc tcaaaatgtg ctggatcaat
       61 gcccggcccg gaatcgcaca cggccacgag gatgcagttg tggtcttgtt cggtgctgat
      121 caacaactct cgtgcccctg ccttgctcgt cgagcccatt gcttcgaccg cattcaggat
      181 caagttcagg acgacctgtt gcaattgaac gcgatcgccg tgaacgggag acaatccctc
      241 agcaagccgg ctctgaacgg aaacgccatt ttgtacgatt ggactccgcg ccaggacaac
      301 cacttcgttg atcgccgcat taagatcgca gagagccttt cggggcggcg ctttcctgat
      361 gtgatcgcgg attcggtcga cgatgtctcc agcgcgatcg gcatcggcca cgacgcagtc
      421 aagcgtctcc tcgacctccc tcaaatccga cgtctgcttg tgcagaaaat tctgggccgc
      481 gcgggcattg ttgcgggcgc tggctatcgg ttgcgtaatt tcgtgagaca gggatgcagc
      541 caattccccc atcatgttca cgcggttcat gtgagcgaaa tctgattgca gttgctgcaa
      601 tcgctccagc gctcgcgtgc gatcctcgat gtccaccaac agagcgtacc agcgtatgat
      661 acgccccgag tcatctcgaa ttgggacgat gcggttttca aaccaccgat agtcaccgtc
      721 gaagcgccgc aggcgtagtt caaattggaa gggaatgccg gcggcgatcg atctcttgaa
      781 aagttcaagg atacggggaa ggtcttcagg atgtacaata tcgtttgtcg cccagttctg
      841 cagctcttcc catgaccggc tacaatactc gaagagctgt cgattgacgg tttcgaattc
      901 accgttcgca gccaggatcg caatgagacc agcgatcccg tcaattgccg accgtaagct
      961 tctctcactt tcacgcagcg cgtcttcggc cttcttgcct tcatcgatgt caatggagaa
     1021 accgtaccat tggatgttgt ttccactatg gtcgcgctga ggctcagcgc gtgcacgatg
     1081 ccagcgatac tcgccgtccg cccggcgtaa acggtgcaca cgctgaaagg actctccagt
     1141 tcgaaatgcg taataaagag ctctttcggt ttctgggacg tcgtccgggt gcaggaccgc
     1201 ctgccagtca ctagatttct gatcttcaaa tcgcatccca aaatagtcga gaaggcgcct
     1261 attgacataa gtcggttcgc cgttggggtt cgctgaccag aagtgacatg gaacgctctc
     1321 gacgaattgg cggagcttgc gttcgctgtt ccggacggct tgctctgcac tcttaagctc
     1381 ggtcaaatcg agcacgaaga caacgccctc gttgcggctt ttttcgaaga gcgccccgcc
     1441 aattagcacc ggcacacgac tgccatcttt gcgaaaatac tctttctcga ccggatgaaa
     1501 agtcccggtt gagcgtagtt cggctactgc gcgttcactc tgctcacgcc aatcggctgg
     1561 cgtcagatcg gtccagcgca agcgacgcga agcaatatct tcgcgactga actgcagcat
     1621 gcgcagaaac gcttcgttgg cttcgacgat ggcaccttca agattcgaaa tgcagatccc
     1681 cagaatgttg gcgtcgacca ggcagcggat cttgccttcg ttggagcggg tgacgttggc
     1741 gtaaagccgc gtcgtctccg ctagtagaac gaccaggacg atcgtcgagg tgagcaacga
     1801 aaacgcgcgc cctgcataaa agccaaggct gaagcgctcg ctgacaaaca tggcgccgag
     1861 tgccatttcc aaaagtgccg cgagggcgac gatcatcagc cattcatcga gcagcgagcg
     1921 ccggcgaagc cacaggaccg cgaccgcgct cgcggacgtc agcatcgtgg tcgcggcggc
     1981 caggcgagcc gcgggcgtga aatcaaccct gtccgcgaat aacggcggca ggtagtcgtt
     2041 gccggcggtg gcgagcaggg tcaatccgca gacgagcaca agaacgagcg cgatgcctct
     2101 gacgatcacg gcgagcaacg acggctgagc cggtgccgga tcggggtttt cgtccctcat
     2161 caatccgtag cccagcagcg ccacggggaa aagcaagtgc caaaaccaat agagcgatgc
     2221 tgtggtctga aggccggcgc caagcagacc ggtcggagaa aatgcgcccg gaaacgtgag
     2281 cgcgtgggga atgattatca aagccgaaaa gaggtagccg caggcgagga cgaggagagc
     2341 gcccagccga t
//
LOCUS       DATILV010000101         1844 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4366815, whole genome shotgun sequence.
ACCESSION   DATILV010000101 DATILV010000000
VERSION     DATILV010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1844)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1844)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1844
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4366815"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..479
                     /locus_tag="VLJ17_02215"
     CDS             <1..479
                     /locus_tag="VLJ17_02215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21826.1"
                     /translation="ATSIGITSSRGHGIGPLSASKDHRGRDVYINPFTILQFETGVSA
                     TDPTCTPANLSNCTVPPKGSAFYPFYALRTGEGDDRKHGREDDEAEGCVLIFGNFSGR
                     GINNFGGDAQYGSPDVARAFQEHVSSLQLNPCLPRFDRDEQEARNGREARNERDDR"
     gene            complement(626..>1844)
                     /locus_tag="VLJ17_02220"
     CDS             complement(626..>1844)
                     /locus_tag="VLJ17_02220"
                     /EC_number="6.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA carboxylase subunit beta"
                     /protein_id="HSV21827.1"
                     /translation="QKITKIQDMAMKARAPIIGLFDAGGARIQEGVAALGGYGEVFKR
                     NVIASGVIPQISVIMGPCAGGDVYSPAMTDFIFMVKDTSYMFVTGPDVVKTVTNEVVT
                     AEELGGALVHTTKSSVADGAYENDVECLLQMRRLIDFLPSSAAAGPPEWPSFDDIERE
                     DASLDTLVPDHPNKPYDIKELILKVVDEGDFFEISQAFARNMVTGFGRLAGRTVGFVA
                     NQPMVLAGVLDADASRKAARFVRFCDAFDIPIVTFVDVPGFLPGTAQEYGGLIKHGAK
                     LLFAYSQSTVPLITVITRKAFGGAYDVMASKHVGGDINYAWPSAQIAVMGAKGAVEII
                     FRSDLGDPEKIAARTKEYEDRFLSPFVAAERGYIDEVIMPRATRKRLARALGMLRGKK
                     VEMPARKHDNLPV"
BASE COUNT          351 a          588 c          554 g          351 t
ORIGIN      
        1 atgcaacgtc gatcggcatt acatcgtcgc gcggccacgg cattggtccc ctaagcgcat
       61 cgaaggatca ccgcggaagg gatgtctaca tcaatccctt tacgatcctt cagtttgaga
      121 ccggtgtctc tgcgactgat cccacttgta cccccgccaa cctgagcaat tgcaccgttc
      181 cgcccaaagg ctcagcgttc tatccgttct acgcgcttcg caccggcgaa ggggacgatc
      241 gcaagcacgg cagagaggac gatgaggcag aggggtgcgt cctgatcttc ggaaatttca
      301 gcggccgtgg gatcaacaat ttcggcgggg acgcgcaata cggctcacct gacgtggctc
      361 gggcctttca ggagcatgta tcctcgcttc agctcaaccc atgccttccg cggttcgacc
      421 gagacgagca agaagcgcga aacgggcgag aagcgcgaaa cgagcgtgat gaccgctagg
      481 gcgttgccgg gcgcgtagct ccggttgacg gatatgcatt tccgggcggg ccccctccgg
      541 cgccgcctat ttcaccaaga cctggtccgc tcgccgcacg atgatgtggc ttgcgtcggc
      601 gccgcgtgca gtcacttaac gtcactcaca ccggcaaatt gtcatgcttc ctcgccggca
      661 tctccacctt cttgcccctg agcataccca gcgcccgcgc cagccgcttg cgcgtcgcgc
      721 gcggcatgat cacctcgtcg atatagccac gctcggcggc cacgaacggt gacagaaagc
      781 ggtcttcgta ttccttggtg cgcgccgcaa tcttttcggg gtcgccgagg tcggagcgga
      841 agatgatttc gaccgcgccc ttcgccccca ttacggcgat ctgggcggat ggccaagcgt
      901 agttgatgtc gccgccgaca tgcttggacg ccatcacgtc ataggcgccg ccgaacgcct
      961 tgcgggtaat gaccgtgatc agcggtaccg tgctctggct gtaggcgaac aatagcttcg
     1021 ccccatgctt gatgagaccg ccatattctt gagcagttcc gggtaggaac cccggtacgt
     1081 ccacaaacgt gacgatcggg atatcgaagg cgtcgcagaa gcgcacgaaa cgtgccgcct
     1141 tgcggctggc gtcggcatcg agcacgccgg ccagcaccat gggctggttc gccacgaatc
     1201 caaccgtgcg ccccgcaagg cggccgaagc ccgtgaccat gttgcgggcg aaggcctggc
     1261 tgatctcgaa gaaatcgccc tcgtccacca ccttgagaat gagttccttg atgtcatagg
     1321 gcttgttggg gtggtccggc accagcgtat cgagcgaggc atcctcgcgc tcgatgtcgt
     1381 cgaaggacgg ccattcgggc gggcccgcag ccgcgctgga cggcaaaaaa tcgatcagcc
     1441 ggcgcatctg cagcaggcac tcgacgtcgt tctcataggc gccgtcggcg accgaggatt
     1501 tggtcgtatg gaccaaggcg cctcccagtt cctcggccgt caccacctcg ttggtcacgg
     1561 tcttgaccac gtccggaccg gtgacgaaca tgtaactcgt atcctttacc atgaagataa
     1621 agtccgtcat ggcgggcgaa tagacatcgc cgccggcaca cggacccatg ataacggaaa
     1681 tctgcgggat gaccccggac gcgatcacgt tgcgtttgaa cacttcgccg taaccaccca
     1741 gcgccgcgac accttcctgg atgcgggcgc cgccggcatc gaacaggccg atgatcgggg
     1801 cgcgggcctt catggccatg tcttggatct tggtgatctt ctgg
//
LOCUS       DATILV010000102         2033 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_22778, whole genome shotgun sequence.
ACCESSION   DATILV010000102 DATILV010000000
VERSION     DATILV010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2033)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2033)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2033
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22778"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..200)
                     /locus_tag="VLJ17_02225"
     CDS             complement(<1..200)
                     /locus_tag="VLJ17_02225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21828.1"
                     /translation="MKANVIHSGSSAVHVSHRPLAVGLALVAAAIVLSEQHTCAETAV
                     PGSREVPARTLPVPTTVSAQMQ"
     gene            complement(322..810)
                     /locus_tag="VLJ17_02230"
     CDS             complement(322..810)
                     /locus_tag="VLJ17_02230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012092675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF411 domain-containing protein"
                     /protein_id="HSV21829.1"
                     /translation="MRFALTRRATLAAIAGLATASYSHFSKAGPSATKITVTKDPNCG
                     CCSGWVDHLRQAEFSVDVVENSELDQVKTRLGVPQALAACHTAEVDGYVIEGHVPAVC
                     IRRLLAEQPKAKGVAVPGMPVGSPGMEVHGARPDTYTVFLFGPFGRRPYARFEGTQEL
                     PI"
     gene            complement(1271..1525)
                     /gene="merF"
                     /locus_tag="VLJ17_02235"
     CDS             complement(1271..1525)
                     /gene="merF"
                     /locus_tag="VLJ17_02235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007068548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mercury resistance system transport protein
                     MerF"
                     /protein_id="HSV21830.1"
                     /translation="MTFGIFALVTVGGLIGGMTDRRLLMTGCIGVGVAALCCFTPVLV
                     ALLGVVGLSAAAGWLDFVLLPVMAVFVAIIVYALIRKRPA"
     gene            complement(1549..1914)
                     /locus_tag="VLJ17_02240"
     CDS             complement(1549..1914)
                     /locus_tag="VLJ17_02240"
                     /inference="COORDINATES: protein motif:HMM:NF013540.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSV21831.1"
                     /translation="MHTHVTARRRSDPRTQTLRNEAGRWLCELRNKRGLSQSQLAQRV
                     GEKSYMIISQFENGRARVHPDRYLVWAYALGVEPRRFVRELMSYYDPVTYGIIFGPRS
                     PSHSGRALRVSASTGTTAE"
BASE COUNT          427 a          643 c          587 g          376 t
ORIGIN      
        1 ttctgcattt gcgcgctgac ggtggtcggg accggcagcg tgcgcgccgg cacctcacgc
       61 gatcccggga cagccgtctc ggcgcatgta tgctgctccg acaggacaat tgctgctgcg
      121 acaagggcaa ggcccaccgc aagcgggcga tgcgagacat gaacggcgga tgagcctgaa
      181 tgaatgacgt tagctttcat ggagccctcc gacgatattt ttcccgccgc tcacacggtg
      241 atgattccat caccgagctc acggtaagag ttcaactggg agctaccgca aaaatgctgg
      301 tcgagcgcgc ttgcgcgcct gtcagattgg cagttcttgc gtgccctcga aacgagcgta
      361 tggccgccgg ccgaatgggc cgaacaggaa taccgtgtat gtgtcgggtc gcgcgccatg
      421 gacctccatc cctggcgagc cgaccggcat accgggtacc gccacacctt tcgctttcgg
      481 ctgctcggcg agcagacggc gaatgcaaac ggccggtaca tgcccttcga tgacgtaacc
      541 gtcgacttcc gcggtgtggc aggccgccag agcctgtggg acgcccaaac gcgttttcac
      601 ctgatcgagt tcagaattct caacgacatc cactgaaaat tcggcctgcc gcagatggtc
      661 tacccagccg ctgcaacacc cgcaattcgg atcttttgtg acagtgatct tcgttgccga
      721 tgggcccgcc ttggaaaaat gggaatagga cgcagtcgcc aagccggcaa tcgccgcgag
      781 cgtcgcgcgt cgcgtcagtg cgaatctcat caccgatctc ctagcgacgt gatttttgcg
      841 ttcaaatcgc acccatcgac aatacatcgt tgccgaatag ttgtctgcga catcgatgat
      901 cgttctggcg acgccgacac ccgtggcgtg gctatttctt ccgcccttgg gctgaccgcc
      961 gccagcgcta gcgcatgttc cggcgacgtg gatgccggtt catagacaag aacatgcgcc
     1021 actcgcgctc gacagccatt cctgagtaaa tctgcaacga gatccggttc cattcgatcg
     1081 gaaaaggcgc ttttcaactg accgcgggcc gttggattgg tgggcacggc acggaaccgt
     1141 atgagcagca cgcgcagcag tcgcccgcct ttcgcttcag ccgtgtgccg ccgccccgca
     1201 ccaataaaag aattggcaag cacacgcgcc tgatgcccgc acatcggaac ggtgacggcg
     1261 cattccagga tcatgccggc ctcttgcgga tcagcgcata gacgatgatc gcgacaaaga
     1321 cagccatgac cgggagcaat acgaagtcca gccaaccggc cgcggccgag agtccaacca
     1381 cgcccaatag agcaacgaga accggagtga agcagcacag ggcggccaca cccactccga
     1441 tacagcccgt catcagcaag cgcctgtcgg tcatgccccc tattagcccg ccgactgtaa
     1501 cgagggcaaa aattccgaat gtcatctatc cgaaacgacg ggcggccctc attccgcggt
     1561 cgtaccggtg gatgcgctaa ccctcaacgc cctccccgag tggctcggag atcgcggccc
     1621 gaagatgatc ccgtatgtca ctggatcgta atacgacata agctcgcgaa cgaagcgacg
     1681 aggctcaact cccagggcat acgcccaaac cagatagcgg tccggatgaa cgcgggcccg
     1741 cccgttctcg aactgggaaa tgatcatgta ggatttctct cccacccgct gggccagctg
     1801 ggattgggac aagccgcgct tgttcctcaa ctcgcacaac cagcgacccg cctcgttgcg
     1861 aagcgtctgc gttcgtgggt cggatcggcg ccgggcagta acatgggtgt gcattgcaga
     1921 ctttcccgtc ttgttagacc attgtcgacc tcttcgcctg gaccggcgga cagggggtgg
     1981 acccgtagga acagaaaacg cagcagtcgc ccggctctgg cttcaattgc gtg
//
LOCUS       DATILV010000103         5372 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3856579, whole genome shotgun sequence.
ACCESSION   DATILV010000103 DATILV010000000
VERSION     DATILV010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5372)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5372)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5372
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3856579"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1617
                     /locus_tag="VLJ17_02245"
     CDS             <1..1617
                     /locus_tag="VLJ17_02245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015116 - sulfate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HSV21832.1"
                     /translation="DVVAGVTLAAYAIPVSLAYAGLAGLPPHVGVYGYLLGGLGYALF
                     GSSRQLAIGPTSAISLMIAGTVGAMADGDAQRYAQIASLAGFTVAALCLLAWLLRLSV
                     LVKLISDSILVGFKAGAALTIAMTQLPSLFGVAGGGHNFFERAVIMTGQLGQMHYIVF
                     VVGVVAIMLLVFGERLLPGRPIALGVVALSIVAASVLGFHDLGVPTTGKIPAGLPTLG
                     GPALRLHDVEGIVPLAAGCLLLAYIEGVSAARTFAAKHGYALDPRQEFLGIGAANLAT
                     ALGHGYPVAGGLSQSAVNDKAGARTPLALVFASITLALCLLFLTGLLENLPKAVLAAV
                     VLTAVYGLLDIPALLRMWRVSQLDFYAAAIALGGVLLLGILQGILLAALASILLMLTR
                     VSSPHVAFLGRIPGTNQYSDLVRHPENETLAGVIAFRPEASLIYLNADAVLESVLNRL
                     RAAGPSKVRLVVCDLSASPNIDLAGSRMLHELQAELTAPGIALRVVGAHGRVRDLLRA
                     DGMAEKVEGLDRLVTLDSLLGDSQTPSSTR"
     gene            complement(1603..2232)
                     /gene="cmk"
                     /locus_tag="VLJ17_02250"
     CDS             complement(1603..2232)
                     /gene="cmk"
                     /locus_tag="VLJ17_02250"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - cytidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HSV21833.1"
                     /translation="MIIAIDGPAASGKGTLGKRLAAHYGLRHLDTGLLYRAVAQAVLD
                     SGHRLDDAAYAAAAAQALDPSQFDEVALKNHAAGEAASVVSAIPAVRAALFQLQQDFA
                     AVPPGAVLDGRDIGTVICPFADAKIFVTASPEVRAKRRAIEMRSLGLTADETAILADI
                     RRRDERDSQRAIAPLKPATDAHILDTSNLDIDAVVREAIAIVEKTLAGT"
     gene            complement(2229..3539)
                     /gene="aroA"
                     /locus_tag="VLJ17_02255"
     CDS             complement(2229..3539)
                     /gene="aroA"
                     /locus_tag="VLJ17_02255"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003866 - 3-phosphoshikimate
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HSV21834.1"
                     /translation="MTARRGRPLAGRIRVPGDKSISHRALILGALAVGSTRISGLLEG
                     EDVLKTATAMRSLGARVERVGDGAWRVDGVGVAGFAEPATPLDFGNSGTGCRLVLGAV
                     AGCPIAATFDGDASLRKRPMRRVLDPLALMGARATNAAEGGRLPIRLVGARDPLPILY
                     RTPVPSAQIKSAVLLAGLAAPGTTIVIETEASRDHTELMLAHFGAEVRSEPEGAHGRK
                     ISLTGQPELVPSTVAVPADPSSAAFPMVAALLVPDSDIFLPDVMTNPLRTGLIATLRQ
                     MGASISQEELRDDGGEGMAGFRVRHSPLRGIEVPPERAPAMIDEYPILAVAAAFADGT
                     TVMRGLKELRVKESDRLAATAAMLRVNGIDVEISGDDMAVRGRGHTPGGGLVATHMDH
                     RIAMAALVLGLAADQPVTVDDASFISTSFPGFADLMRGLGGDLV"
     gene            3748..4149
                     /locus_tag="VLJ17_02260"
     CDS             3748..4149
                     /locus_tag="VLJ17_02260"
                     /inference="COORDINATES: protein motif:HMM:TIGR02300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02300 family protein"
                     /protein_id="HSV21835.1"
                     /translation="MAKPELGTKRLCAHCGARFYDLNHAPITCPKCGTVFEATVVAPR
                     GRPDAARATSREVEAVVPETHEAEFVSLEEADAEAQGKKKPAGEPIEADDDVEIDDES
                     LDDATFIEETEEEDTDVTEIIGGDIENEEET"
     gene            4293..4368
                     /locus_tag="VLJ17_02265"
     tRNA            4293..4368
                     /locus_tag="VLJ17_02265"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4326..4328,aa:Ala,seq:ggc)
     gene            complement(4648..>5372)
                     /locus_tag="VLJ17_02270"
     CDS             complement(4648..>5372)
                     /locus_tag="VLJ17_02270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008452 - RNA ligase activity [Evidence
                     IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="RtcB family protein"
                     /protein_id="HSV21836.1"
                     /translation="SGNHYVDLMRDEAGFVWIGVHFGSRGLGHTSATRYLKAAGGKDG
                     MNVPPAVIDEDSEIGRRYIAAMELAGRYAHAGREWVIERVRKIIGGAVTDSVHNHHNY
                     AWRERHGDLDLWVVRKGATPAFPGQRGFVGGSMGDDAVIIEGIDSEESRAALYSTVHG
                     AGRLFGRKEAKRRFTRAEMDAWLRDRGVVLIGADLDESPMAYRRLPEVIAEHAGTVRV
                     LHTLQPFAVAMAGSGEFDPWKD"
BASE COUNT          965 a         1709 c         1703 g          995 t
ORIGIN      
        1 gatgtcgtcg ccggagtgac gctcgcggcc tatgcgatcc cggtttctct tgcctatgcc
       61 ggacttgcag gcctgcctcc acacgtcggc gtatacggct atctgctcgg tgggctcggc
      121 tacgcgctct tcgggtcgtc gcgtcaactg gcgatcggac ctacctctgc gatctcactc
      181 atgatcgccg gcacagtggg ggcgatggcg gacggcgatg cgcaacgcta cgcacagatt
      241 gccagcctcg cgggcttcac agtggctgcg ctttgcctgc tcgcttggct attgcgactg
      301 agcgtgctcg ttaagttgat cagcgacagt atcctcgtgg gtttcaaggc cggcgccgcg
      361 ttaaccatcg ccatgaccca gctgccaagc ctgtttggag tggcaggtgg tgggcacaat
      421 ttttttgaac gagccgtgat catgaccggg cagctcggcc aaatgcacta cattgtattt
      481 gtcgtcggcg ttgtcgcgat catgctgctc gtgttcggtg aacgcttgct gcctggaaga
      541 ccgatcgcac tcggggttgt cgcgctatca atcgttgctg cctccgtgct tggattccac
      601 gatcttgggg tgccaacgac gggaaagatc ccggccggtc ttcccaccct gggaggccca
      661 gcgctgcggc tgcacgatgt ggaaggcatt gttccgctgg cggccggatg cctgctgctc
      721 gcctatatag aaggcgtctc tgccgcccgt acttttgctg caaagcacgg gtacgcgctg
      781 gatccgcggc aggagtttct cggcatcggg gcagcaaatc tcgcaacagc gttgggacat
      841 ggctaccccg tggccggcgg tctgtcccaa tctgccgtga acgacaaggc cggcgcacgc
      901 accccactcg ctcttgtctt tgcgtcaatt acgcttgccc tgtgcctact cttcctcaca
      961 gggctgcttg aaaaccttcc gaaagccgta ctggctgcgg tggtattgac ggcggtgtac
     1021 ggactgctgg atattccggc gctgttgcgc atgtggcgcg tgagccagct ggacttctac
     1081 gctgcggcga tcgctctcgg cggggtgctg ctgctgggga tattgcaggg tatcctactt
     1141 gctgcactgg cctctatact tttgatgctg acccgtgtgt ccagtccaca tgtggcattc
     1201 cttgggcgca ttcccggaac gaatcaatat tccgacctcg tccgccatcc cgaaaatgag
     1261 acgctagcag gcgtgattgc cttccgtcct gaagcgtcgc tgatctatct caatgcggac
     1321 gctgtcttgg aatctgtttt aaatcgcctg cgcgcagcag gcccgtccaa ggtccgattg
     1381 gtggtatgcg atctctcggc atcgccaaat atcgacctcg ccggttcgcg catgctccat
     1441 gaacttcagg ccgaacttac cgctcccggc attgcattgc gggtcgtcgg ggcgcatgga
     1501 cgggtacgcg atctcctgcg agccgacggc atggccgaaa aggttgaagg gctcgacagg
     1561 ctcgtgacgc tcgatagtct gcttggcgat agccagacgc catcaagtac ccgctagagt
     1621 tttttccacg atggcaatgg cttcgcgtac cacagcgtcg atgtcgagat ttgacgtgtc
     1681 gaggatgtga gcatccgttg ccggtttaag cggcgcaatc gcccgttggg agtcgcgctc
     1741 gtcgcggcgc cggatgtcgg cgaggattgc ggtctcgtct gccgtcagac ccaagctgcg
     1801 catctcgatg gcgcgacgct tcgcccgcac ttcgggcgag gcggttacga aaatcttggc
     1861 atccgcaaac gggcagatga cggtgccgat gtcgcgtcca tccagaacgg caccaggtgg
     1921 gacggcggca aaatcctgct gcaattggaa cagcgccgcc cgtaccgccg gaatagctga
     1981 aacaacggag gcagcctcgc cggccgcatg gtttttcagc gccacttcgt cgaattggct
     2041 aggatcgaga gcttgggccg ccgctgcagc gtaggcggcg tcgtcgagcc ggtgcccgga
     2101 gtcaagcacc gcctgtgcca ccgcccggta gagcaggcca gtatcgagat gccgcagccc
     2161 gtagtgggcc gcgaggcgtt tgccgagagt gcccttgccg gaggccgccg gaccatcgat
     2221 ggcgatgatc ataccagatc gcctccgagt ccgcgcatca ggtcggcgaa gcccggaaag
     2281 cttgttgaaa tgaaggaggc gtcgtcgacc gtcacgggct gatcggccgc gaggcccagc
     2341 accagcgccg ccatggcaat gcgatgatcc atgtgggtgg cgacgaggcc gccgcctggc
     2401 gtatggccgc gcccccgcac ggccatatcg tcgccggaaa tctcgacatc gataccgttg
     2461 acgcgcaaca tggcggcagt ggcggccagg cggtcggatt ccttaacccg cagttctttt
     2521 aacccgcgca tcaccgtggt gccgtccgcg aaggctgccg caaccgcgag gatcgggtac
     2581 tcgtcgatca tggcgggggc gcgctcgggc ggcacctcga tgccgcgcaa cgggctgtgc
     2641 ctcacccgaa acccggccat gccttcgccg ccgtcgtctc gcagctcctc ctgggaaata
     2701 gaggcgccca tctggcgcaa ggttgcaatc agtccggtac gcagcgggtt ggtcatgaca
     2761 tccggcagga agatgtccga atccggcacg agcagcgccg ccaccatcgg gaatgcggcc
     2821 gacgacggat cggctggtac tgcgaccgtg ctgggcacca actcgggctg gccggtgagc
     2881 gaaattttgc gcccgtgggc gccctccggt tccgacctca cctcggcgcc gaaatgcgcc
     2941 agcatcaatt cggtgtgatc gcggctcgct tcggtttcga tgacgatggt ggtaccgggg
     3001 gccgccagac cggccagcag cacggccgac ttgatctgcg ccgatggcac tggcgtgcgg
     3061 taaaggattg gcagcgggtc gcgggcgccg acaagcctga tcggcagccg gccaccctcg
     3121 gcggcgttcg tcgcgcgggc ccccatgagg gcgagggggt cgagaacgcg gcgcatcggc
     3181 cgcttgcgca gagaggcatc gccatcaaag gtggctgcta tcgggcatcc cgccaccgct
     3241 cccaagacta ggcggcaacc ggtaccagaa ttaccaaaat caaggggcgt ggccggctcg
     3301 gcaaagcccg ccacgccgac gccatcgacc ctccaggcac cgtcgccgac tcgttcgacc
     3361 cgggcgccga gcgagcgcat cgctgttgcg gttttgagca cgtcctcgcc ttccagcagg
     3421 ccggaaatcc gcgtgctccc caccgccagg gcgccaagaa tcagggcgcg gtgggaaatc
     3481 gacttgtccc caggcacgcg gatgcgacca gccagcggcc ggccgcgtcg cgcggtcatc
     3541 gggatgggag gtaatgcgtg atccaagggc cgcttccaat ttagggcgcg tcctagcacg
     3601 cagcaaaacg ccggtcacgc ggtcgcttgc agcgtcatgc gaacagcgca ggggcgttca
     3661 cgggataccc caatcgtcta ttgacagagc cgtcgcgaaa cgccaagggg aggaccgctt
     3721 tcaacgaccc ttgaggattg cgaatccgtg gcaaagcctg agctcggtac aaagcgctta
     3781 tgtgcacatt gcggcgccag gttttatgac ctgaaccacg cccccatcac ctgcccaaaa
     3841 tgcggcaccg tcttcgaggc gacagtggtc gccccgcgcg ggcgtccgga cgccgcgcga
     3901 gccacctcgc gggaagtcga agccgtggtg ccggaaacgc acgaggccga attcgtctcc
     3961 ctcgaagagg ctgatgccga agcgcaaggc aagaagaagc cggcgggcga gccgattgag
     4021 gcagacgatg acgtcgagat cgatgatgaa agtctcgacg acgccacttt catcgaggag
     4081 accgaggagg aggataccga cgtcaccgaa atcatcggcg gcgacatcga gaacgaggag
     4141 gagacttgag ggctttgcca gtatatgatt tcaggacttg cggctgacgc acagacgcgg
     4201 cagcgccgga cgatgggccg gggtctcgac ctagccgagt tcctgccagg ctccggtcac
     4261 ggaaaggcac ggagtcccat gccgtgcaaa gtggggccat agctcagttg ggagagcgct
     4321 tgaatggcat tcaagaggtc aggggttcga ctccccttgg ctccaccaag accctctctt
     4381 tacaatccat cgtaatccat cgctgacagc caaaaaaacc tgactccgac gccgcggcgg
     4441 gggggccgct ccgagttgga ggcgtgtgac gccaaaggtg ccctgccccc cgagctgccc
     4501 cactggacta ctcgggcggc acggacgcgc agatatgaag ggtagcacgc cggcccgaac
     4561 cgaggattct gcccgagtcc gctcccgaat caacatacgc gcaatggcta ctggcgctgt
     4621 accgtaatga gtttctcgag gttcgggtta atccttccac ggatcaaatt ccccgctgcc
     4681 cgccattgcc acggcaaaag gctgcagtgt gtgcagcacg cgcactgtgc ctgcatgttc
     4741 cgcgatcact tcgggcaagc gtcgataagc catcgggctt tcatcgaggt cggcgccaat
     4801 caacacgacc ccccgatccc ggagccatgc gtccatttcg gcgcgcgtga agcgccgctt
     4861 cgcttcctta cgaccgaaca gccggccggc gccatgcacc gtcgaataga gcgcggcccg
     4921 ggattcttcg ctgtcgatcc cttcgatgat cacggcgtcg tcgcccatgg agccgcctac
     4981 gaagccgcgt tgtcccggaa acgccggggt cgcgcccttg cgcaccaccc acagatcgag
     5041 gtcaccgtgg cgctcgcgcc aggcgtagtt gtgatggtta tgcacgctgt cggtgactgc
     5101 gccgccgatg attttgcgca cccgctcgat cacccactcg cgccccgcat gggcatagcg
     5161 gccggcaagc tccattgcgg cgatgtaccg gcgcccgatc tcgctgtcct catcgatcac
     5221 tgccggcggg acattcatgc cgtccttgcc gccggcggcc ttgagataac gcgtcgcgct
     5281 ggtgtgaccg aggccgcgcg agccgaaatg cactccgatc cagacgaagc cggcctcatc
     5341 acgcatcagg tcgacataat gattgccgga gc
//
LOCUS       DATILV010000104         3405 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3856641, whole genome shotgun sequence.
ACCESSION   DATILV010000104 DATILV010000000
VERSION     DATILV010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3405
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3856641"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..232)
                     /gene="yajC"
                     /locus_tag="VLJ17_02275"
     CDS             complement(<1..232)
                     /gene="yajC"
                     /locus_tag="VLJ17_02275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HSV21837.1"
                     /translation="MITPAYAQGVGGSSPDLLYQLLPFALIFVIMYFLILRPQQKRAK
                     QHQEMVKNVRRGDTLVTSGGLVGKVTKVVDDDQ"
     gene            566..1483
                     /locus_tag="VLJ17_02280"
     CDS             566..1483
                     /locus_tag="VLJ17_02280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV21838.1"
                     /translation="MSLAKKPLVSPTVVSSTAPADVLERIADALERIAPPSPRAPDFT
                     VTDAYIWYPSGRMLAPVPHVNRVDMSLLKGIDRMRDILVENTQRFARGLPANNALLWG
                     ARGMGKSSLVKAAHAAVNAGLGRDAGLLKLVEIHREDIESLPDLMALLRGAPFRFLVF
                     CDDLSFDVQDTSYKSLKAVLEGGIEGRPDNVILYATSNRRHLMSRDMIENERSSAINP
                     GEAVEEKVSLSDRFGLWLGFHRCSQDEFLAMVDGYVRYYSVPIDGETLRREALEWATT
                     RGSRSGRVAWQYVQDVAGRLGVTLMDKSP"
     gene            complement(1567..2343)
                     /locus_tag="VLJ17_02285"
     CDS             complement(1567..2343)
                     /locus_tag="VLJ17_02285"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HSV21839.1"
                     /translation="MAGASAQTLLPAPPVHTVASGDTLAKVAHKYRVSVNDIAVANGI
                     ASETPLKIGMHLTVPVKTPSTRPGKLQFTSPMAQTKPTSAPYTAVAPAPGKLASSEPA
                     ANVRMASPVATSSEDASPNGANGAPPFRWPARGRVINNFGAKVNGSANDGIDLAVPEG
                     TQVRAADDGVVAYAGNELKGYGNLVLVRHSNGFVTAYANASELLVRRNDQVHKGQVIL
                     KSGQTGNAVTPQLHFEIRKNSAPVDPMQFLPTDKTASAPL"
     gene            2342..2497
                     /locus_tag="VLJ17_02290"
     CDS             2342..2497
                     /locus_tag="VLJ17_02290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21840.1"
                     /translation="MAVGAGVPTCAGAGATGAIAADGDLRGAAACASFAPAWGGLQLL
                     PVRVAPE"
     gene            2544..2855
                     /locus_tag="VLJ17_02295"
     CDS             2544..2855
                     /locus_tag="VLJ17_02295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21841.1"
                     /translation="MAAAHTERGHTEAERIEAERIEVKCIEVGGIEADCIEADCIEVE
                     GIEADCTEVEVGDIEANCIEVEVGRIEAARTAMRPAQADIEVAPIAPAVMAGVPRLRR
                     V"
     gene            complement(3185..>3405)
                     /locus_tag="VLJ17_02300"
     CDS             complement(3185..>3405)
                     /locus_tag="VLJ17_02300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HSV21842.1"
                     /translation="PFDRIIVTAAAAAVPQPLVDQLVMNGIMVLPLGPQDEHQMLVKL
                     ARTKDGVTRTELIGVRFVPLLPGQAQEL"
BASE COUNT          608 a         1013 c         1111 g          673 t
ORIGIN      
        1 cctgatcgtc atccaccacc ttggtgacct ttccgaccaa cccgcccgag gtgacgaggg
       61 tgtcgccgcg acgcacgttc ttgaccattt cctggtgctg ctttgcccgc ttctgctggg
      121 ggcgcagaat gaggaaatac atgatgacaa aaataagcgc gaaaggcagc aactggtaca
      181 gcaaatccgg gctgctgcct cccacgccct gtgcgtaggc aggtgtgatc atgcgcgcaa
      241 ttctcctttg cgggtttcct aaacatccgt ccgtcaggcc cggaaacccg ccgaagcgga
      301 agtcgcgcgg actatagccg ccaccggccc gattgcaacg acgcacggcc ggccaccgcc
      361 cccttaaagg ggaaaaggtc ggcccgcttt agcgggccgg gaggggtgaa agtgcttcag
      421 ccataggctg cgccgccgtt accctggttt cggccacccg accctcccct ctgctgcgga
      481 tgaaacgacg tacctcggca aatgctgtgc cttgcggcat ttcctgtagc ccgctattgg
      541 gggacgcgat cacaaaggca actcaatgtc acttgcgaaa aagcccttgg tctcacccac
      601 ggtcgtttca tccaccgccc cggcggatgt cctcgaacgc atcgccgacg ccttagagcg
      661 catcgcccca ccctctccgc gggcgcccga ttttacggtc actgatgcct acatctggta
      721 tccgtccggc cgcatgctag ccccggtgcc gcacgtcaac cgcgttgata tgtcgcttct
      781 caagggcatc gaccgcatgc gcgacattct agtggagaat acccagcggt tcgcgcgcgg
      841 cctgccggcc aacaacgccc tgctgtgggg tgcccgcggc atgggaaaat cgtcactggt
      901 caaggccgcc catgcggcgg tgaatgcggg attgggacgt gatgccgggc tcttgaagct
      961 ggtcgaaatc caccgggagg atatcgagag tctgcccgac ctgatggcgc ttctgcgcgg
     1021 cgcgccgttt cgattcttgg tgttctgcga cgatctctcc ttcgacgtcc aggatacctc
     1081 gtataagtcg ctcaaggcgg tgctcgaagg cggcatcgag ggccgacccg acaacgtcat
     1141 tctctatgcc acctcgaacc ggcggcatct gatgtctcgc gacatgatcg agaacgaacg
     1201 gtcgagcgcc atcaatcccg gcgaagcggt cgaagagaag gtatcgctgt cggaccgttt
     1261 cggcctttgg ctcggctttc atcgctgcag ccaggacgag ttccttgcca tggtggatgg
     1321 ttatgtccgt tactatagcg tgccaattga tggcgaaacg ctgcgtcgcg aagcgctcga
     1381 atgggcaacc acgcgcggat cacgctccgg ccgcgtcgcc tggcaatatg ttcaggacgt
     1441 cgccggtcgg cttggcgtga cccttatgga caagagcccg taagggcacc tttggtatgg
     1501 cctctcgcgc gatgccaaac cggccgtact tcggccgcct ttgcgatcct accgatcagg
     1561 caaactttac aacggcgccg atgcggtctt atccgtcgga aggaactgca tcgggtcgac
     1621 tggggcggag ttcttgcgga tttcgaaatg gagctgcggg gtaacggcgt tgccggtttg
     1681 ccctgatttc aagattacct gccccttgtg aacctgatcg ttgcgcctga ccaacagctc
     1741 actcgcgttg gcataggcgg tgacgaagcc gttggaatgg cgcaccaaaa caaggttgcc
     1801 gtagcccttg agctcgttgc ccgcgtaggc aacgacgccg tcatcggcgg cgcgcacctg
     1861 ggtgccttcg ggcaccgcga ggtcgatgcc gtcattggcc gagccgttca ccttggcgcc
     1921 gaagttgttg atgactcgac cacgcgctgg ccaccggaac ggcggggcgc cgttcgcacc
     1981 gttcgggctg gcgtcctcgg acgatgtcgc gaccggcgat gccatgcgga cattcgccgc
     2041 gggctctgac gatgccagtt tcccaggcgc cggcgcaacg gccgtgtaag gagccgaggt
     2101 cggcttcgtt tgagccatcg gagaggtgaa ttgcagcttg ccgggtcgag tgctcggcgt
     2161 tttgaccggc accgtgaggt gcataccgat cttcagcggc gtttcagatg cgatgccgtt
     2221 ggcaaccgcg atatcgttga cgctgacccg gtatttgtgg gcaaccttag ccaatgtgtc
     2281 gcctgacgct accgtgtgca caggtggcgc aggcagcagg gtttgggccg aggctcccgc
     2341 catggccgtc ggcgcgggtg tgccgacctg cgcaggcgct ggggcaaccg gcgcaattgc
     2401 cgctgacggc gacctacgcg gcgcagccgc atgcgcgagc ttcgcgccgg catggggtgg
     2461 gctccaattg ctgccggtgc gggtcgctcc ggagtaatcg ggcgttgccc gcggcgccgg
     2521 cggctcatat ggcggcggct catatggcgg cggcgcatac cgagcggggg catactgagg
     2581 cggaacgtat tgaggcggag cgtattgagg tgaagtgtat cgaggtgggg ggtattgagg
     2641 cggactgtat tgaggcggac tgtattgagg tggagggtat tgaggcggac tgtactgagg
     2701 ttgaggtggg ggatattgag gcgaactgta ttgaggttga ggtggggcgt attgaggctg
     2761 ctcgtacggc gatgcggccg gcgcaggcgg atatagaggt tgcgccgatt gcacctgcgg
     2821 taatggctgg cgttccacgg ctgcggcgcg tgtaggctgt attggcacgg ccggcggctg
     2881 attggttggt gcgcgcgaag cgtaagcact gccgctggga ttttcgccga agcgggacac
     2941 gtcgccactg caacctgcgg tgccgatcgt cacagcggac agcgcgcccc agaaaaaggc
     3001 gcaacgcaat cgccgcctgg caatacattt gtacatattc gaacccacgc agcagcacga
     3061 ccctgcgggc agtaagacat tgccgaagta aacatctctt taaattttca ggaatcggtt
     3121 aaggctgatg gtaaatattt ggttatcagt cagcgcttct ccggctggcg gggagcggcg
     3181 ccactcacag ctcctgcgct tggccgggca gcaacggcac gaagcgcacg ccgatcaact
     3241 cggtccgcgt gacgccatct ttggtgcgcg cgagtttcac cagcatttgg tgctcatctt
     3301 gggggccgag cggcaacacc atgatgccgt tcatcaccag ctgatccacc agcggttggg
     3361 gaacggccgc ggccgccgca gtcacgatga tgcgatcgaa cggcg
//
LOCUS       DATILV010000105         6073 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4367322, whole genome shotgun sequence.
ACCESSION   DATILV010000105 DATILV010000000
VERSION     DATILV010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6073)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6073)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6073
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4367322"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1027)
                     /locus_tag="VLJ17_02305"
     CDS             complement(<1..1027)
                     /locus_tag="VLJ17_02305"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR01930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HSV21843.1"
                     /translation="MANIEQTVWLAAGVRTPFVGVDGPFAHRDSLALSVPVVQAMAER
                     SHGQIDFAVWGAVAVNLAYANLAREVWLDAKLDPHVPTFTTVMQCSTSMVGVFEAAGM
                     LGRGRPGLALVGGVESMSRVQVGLGQNLSDWLRRIVRARSAKQRIGLLRKLRPSDIRL
                     FVPQVRNRVTGRSMGEHTEDMAKTWNIGRQEQDELAFHGHQKTIAAQDRGFFADLIIP
                     LDGTNKDHFPRRDTSMEKLAKLRPVFDRTGGRGSLTAGNSSPLTDGAAAIWVATDEGL
                     SRLPSAIPRVRLVDFEMAAVDIFNEGLLMAPVSAIPRLLTRGGLKFDDVALWEIHEAF
                     SAQVLCHI"
     gene            complement(1081..2664)
                     /locus_tag="VLJ17_02310"
     CDS             complement(1081..2664)
                     /locus_tag="VLJ17_02310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV21844.1"
                     /translation="MTASVTSPWSPFRHVTFTVLWTATVISNIGGWMYSAASGWLMTT
                     LNPDPFIVSMVQVATSLPMFLFAVPAGALADIVDRRKFLITAEIAITAVSAIFAAIVW
                     FGLATPGNLLLFTFVFGVGSALTAPAWQSIVPQLVPKQDLHPAVAANSVGVNVSRAVG
                     PALGGVIVAKLGIAAPFWLDAISNLGIIGALLWWRPPQKGARHLPVERFSSAIRTGFR
                     HARNNAHLRATLIRGAAFFLFASAYWALLPLVARSQIAGGPDLYGFLLGAIGAGAVGG
                     AFALPWLKAKLGPDRLVAGGTLGTAVAMVLFGLARDSATALSASIIAGMSWIAVLSSL
                     NVSAQVALPEWVRGRGLAMFVTAFFGAISLGSAVWGQVAGMVGLPAAHFMAAAAALVA
                     IPLTWRWKLQTGAEIDLTPSMHWPVPVVTHEVEQDQGPVLVTVEYRIDPQDREPFLVA
                     LKKLGHERRRDGAYAWGVFEDAAEEGRMVETFLVESWLEHLRQHERVTNADRLLQDTV
                     KKFHSAGDPKVTHFIAVDF"
     gene            3304..3825
                     /locus_tag="VLJ17_02315"
     CDS             3304..3825
                     /locus_tag="VLJ17_02315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017957232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSV21845.1"
                     /translation="MSCPIARSLERVGEWWSMLIMRDALHGMTRFDEFQKSLGIAPNI
                     LTRRLNALVEAGLLERRRYSDHPPRNEYVPTARGRDFRPVIVSLLAWGNKHFAPEGPS
                     VILLNRKTGAAVDPIVADPATGLPVDEPDYALAAGPAAGPRTRQRYRAIDDALARKRG
                     AAGSKPTSQARSK"
     gene            3997..4104
                     /locus_tag="VLJ17_02320"
                     /pseudo
     CDS             3997..4104
                     /locus_tag="VLJ17_02320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018244418.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
     gene            4206..4385
                     /locus_tag="VLJ17_02325"
     CDS             4206..4385
                     /locus_tag="VLJ17_02325"
                     /inference="COORDINATES: protein motif:HMM:NF023665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3606 domain-containing protein"
                     /protein_id="HSV21846.1"
                     /translation="MADDKTKRGAQDRTRINTSERYEMDYWKKKFRVSGQQLAGAIRA
                     VGPSVKKVEKYLKEK"
     gene            5060..5965
                     /locus_tag="VLJ17_02330"
     CDS             5060..5965
                     /locus_tag="VLJ17_02330"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: protein motif:HMM:NF012699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid desaturase"
                     /protein_id="HSV21847.1"
                     /translation="MKIKNDALGGFLVGHLIAALAIFPWFFSWTGVALFAVGIYVFGV
                     LGINIGYHRLITHRSFSCPLWLEHTLVGFGACSLQFAPAFWAAIHRRHHHFADDEQDP
                     HSPVVSFFWAHFGWLLARPADMRPGPLTERYAKDLLRDTFYAWLGRRKNWMKLAFLSW
                     AAFFVAGLGVAALSGASMPGAIQFGSSLLVWGGALRTVVVWHTTWSVNSVTHIWGYRN
                     YDTPDSSRNNAIVALLAGGEGWHNNHHADPGSARHGHNWWEFDLSWLTVRVLMLLGLA
                     TNVVLPSTHRVAMFNAHAKSRQTPV"
BASE COUNT         1255 a         1859 c         1812 g         1147 t
ORIGIN      
        1 tgatgtggca gagcacttgc gccgaaaacg cttcatgaat ctcccaaagt gcgacgtcat
       61 cgaactttag accgccgcgc gtgagcaacc gcggaatcgc ggacaccggc gccatgagga
      121 gcccttcgtt gaagatgtcg actgcggcca tctcgaaatc tacaagacgc acgcgtggta
      181 tcgcgctggg caatcgagac aagccttcgt cagtcgcgac ccagatcgca gccgctccat
      241 cagtcagcgg cgagctgtta cctgctgtga gcgagcctcg tccgccggtt cgatcaaaca
      301 ccggcctcaa ttttgcgagc ttctccatcg acgtatcgcg gcgtgggaag tggtctttgt
      361 ttgttccgtc gagggggatg atgagatcag cgaagaagcc gcgatcctgt gcggcgatag
      421 tcttttgatg gccgtggaaa gcaagctcat cttgttcctg acggccaatg ttccaggtct
      481 tagccatgtc ctccgtatgt tcacccatgc tccgcccggt gacgcggttc ctcacttggg
      541 gtacgaaaag ccgaatatcc gatggacgta gctttcgcag aagcccgatg cgttgtttgg
      601 cgctgcgcgc ccgaacaatg cgacgcagcc aatccgatag attttgtccc agtccgactt
      661 gaacgcgact catgctctcg acgccgccca ccaatgcgag ccctgggcgg ccccgtccga
      721 gcattccggc cgcttcgaat acgccgacca tacttgtgct gcattgcatg accgtcgtga
      781 acgtcgggac gtgcggatcg agtttggcgt caagccacac ctcacgcgcc agattggcat
      841 acgccaggtt caccgccacc gccccccaga ccgcgaaatc aatctggcca tgcgatcgct
      901 ccgccatggc ctgcacaacc ggcactgaca acgccaatga gtcgcggtgc gcaaacggcc
      961 catccacacc aacgaacggc gtgcgtacgc ccgcggccaa ccaaaccgtt tgttcgatgt
     1021 tcgccatcgc gccgttatat catgcctcgt accgtgtacc cgaagcgaac atctcagcaa
     1081 ctagaaatca acagcaataa aatgtgtgac cttgggatcg cccgccgaat gaaatttttt
     1141 cacggtatcc tgcagcaggc ggtcggcatt cgtgacgcgc tcgtgctgac gcaagtgttc
     1201 aagccaggat tccacaagaa aggtctccac catccgtcct tcctcggcag cgtcttcgaa
     1261 tacgccccac gcatacgcgc catcacgtcg acgctcgtga ccaagcttct tgagcgcgac
     1321 gaggaatggt tcgcgatctt gtggatcgat ccgatattcg accgtgacca gcaccggtcc
     1381 ctgatcttgc tcgacctcat gcgtgacgac aggtactggc cagtgcatcg acggtgttag
     1441 atcgatttct gcaccagttt ggagcttcca ccgccacgtc agaggaatcg cgaccaaggc
     1501 ggccgcggcg gccatgaagt gtgcagcggg caggccgacc atcccggcga cttgtcccca
     1561 aaccgcactg ccaagggaaa tggctccgaa gaaagccgtt acaaacattg cgagcccacg
     1621 accgcgcacc cattccggta gggcgacctg ggcagagacg ttaaggctcg acaagacggc
     1681 aatccaagac atcccggcaa taatgcttgc tgacagggct gtggctgaat cgcgggctaa
     1741 cccgaatagc accatcgcaa ctgccgtgcc gagagttccc cccgccacaa gccgatcggg
     1801 tcccagtttt gctttcaacc aaggcagcgc aaaagcaccg cccactgcgc cggctccgat
     1861 tgcgcccagc agaaaaccgt agaggtccgg ccctccggcg atctggctgc gtgcaacgag
     1921 tggaagcaat gcccaatagg cgcttgcgaa tagaaagaaa gccgcgcctc ggatcaatgt
     1981 cgcgcggagg tgcgcattgt tcctcgcatg ccgaaaccct gttcgaatgg cactgctgaa
     2041 gcgctcaacc ggcaagtgcc gagctccctt ctgcggtgga cgccaccaca gcagcgctcc
     2101 gatgatgcca agattgctga tggcgtcgag ccagaaaggc gcagctatgc ccagcttagc
     2161 gacaatgacg ccgcccaacg ccggaccgac tgcgcggctg acattgacgc cgacgctgtt
     2221 cgccgccacc gcgggatgga gatcctgttt gggaacgagt tgaggaacaa tcgattgcca
     2281 agctggagcc gtcagcgcac taccgacgcc gaagacaaac gtgaacagca acaaattgcc
     2341 gggcgttgcg aggccaaacc aaacgatcgc tgcgaatatg gcagaaacgg cagttatcgc
     2401 gatttcggcg gtgataagaa atttgcgtcg gtcgacgatg tccgcaagcg cccccgccgg
     2461 cactgcgaac aggaacatcg gtaggcttgt agccacttgc accatcgata cgatgaacgg
     2521 gtcaggattg agagtcgtca tcagccatcc ggatgcagcg ctgtacatcc agccgccgat
     2581 gtttgagatg acggtcgccg tccatagcac cgtgaacgta acatgacgga acgggctcca
     2641 tggcgacgtc actgatgccg tcaaggtcgc aggaggattc gggcttgtgc tcaagccagg
     2701 cccccgaggt gggaacgccc ggcacgaaca accgaacgcg ccccggactg cctggtcgtc
     2761 cgagattgaa acgttggcgc tccgggaacg cgcgtgcaag cggccgtaag tactgcaagc
     2821 atagttgcac ccgcaagctt cggtgaagcc gttggctttg taccgttttc agtgcgtcgc
     2881 cgatagctct gcattacgag gctatgagcc cgttgcgccg gcgcttgatc gaagacatgg
     2941 cgatccgcaa gttagcgccg aaaacccaac aaggctacat ccgcactgtc aaagtcttcg
     3001 ggccgatcgc ctgacacggc gagcttcaag gacgtacggc gttttccact gcatcggatc
     3061 gcgaacggcg cacctacgcc tattctcaat cacgccgcgg ctgcactgcg gttcttttca
     3121 ggatcccgct tcggcggaag cgcgatgcac ctcactttgc ggatatcagc aaaatcctgg
     3181 gagcgcgaaa cggccatggg acatctccca gataagcggg tccagaagcg gccgtccgcg
     3241 ttacttgcat aatagtagtt actgccctag attatgtcaa tgcagcgcaa gagctttggc
     3301 aaaatgtcat gtccgatcgc ccgtagcctg gagcgcgtag gcgagtggtg gagcatgctc
     3361 atcatgcgcg acgccctgca tgggatgacg cgcttcgacg aattccagaa gagcctcgga
     3421 atcgcaccga atatcctcac tcggcgactc aatgcgctgg tcgaggccgg acttctcgaa
     3481 cgccgccgct acagcgatca cccgccgcgc aacgaatacg tgccgaccgc gcgcggccgc
     3541 gattttcgtc ccgttattgt ttcgctgttg gcctggggca acaaacactt cgcgcctgaa
     3601 ggcccaagcg tcatccttct caaccgcaag actggcgcag cagtcgatcc catcgttgcc
     3661 gaccccgcca ccgggctgcc ggtcgacgaa ccggactacg cgctcgcggc cgggccggcc
     3721 gcggggcccc ggactcggca gagatatcgc gccattgatg atgcactggc gcgaaagcgc
     3781 ggggcggccg gcagcaagcc gacgtcccaa gcgaggagca aatgatccga acgcgatcgt
     3841 tgtgggtgtc ggagccgaac gtgggctcgg cgcagcgctg tgccagcgat ctgcgcaaat
     3901 taatggaccg cgcttcgcgc aggcaatcct gaccaccgag gagctgccgg ccttgctacc
     3961 gcactaaacc aacaaacgac atacaaggag aaatccatgg gcaagcttga aggaaaaatt
     4021 gccctcatca ccggtggcaa tggcggcatt ggccttgcaa cggcgaagcc gtttgtgaat
     4081 gagggcgcgt acgtgttcat gacagcctaa gcgatgtgaa ggagaagcga gcacgcccgc
     4141 catggatgat tgaccggatg gaacgtccgc ggtttgatgg tcgccgttaa ttgcaggagc
     4201 aggtcatggc tgatgacaag accaagcgcg gcgcgcagga tcggacccga atcaatacca
     4261 gcgaacgcta cgagatggac tactggaaga aaaagtttcg cgtttcgggc cagcagctcg
     4321 cgggcgccat ccgcgcggtt ggaccatcgg tgaagaaagt ggagaagtac ctgaaggaga
     4381 agtgactggt gctcgacgcg caagtgaagg tctcgcgccc gaccgcattt gcgcgaggcc
     4441 gcgtttgctg acgcgcggac aggccggcgg tcattgtcat tcaggcagcg gccggcccac
     4501 gtcggattcg gctgtgaggt tttcaagacg cgctcgggcg acgtcgccaa catctcatcg
     4561 aggatggccg tgcgacccgg ttggatgagg gccagctgtc tatcgccgca acctgcttac
     4621 ccccaaccct cgcccggcag gcgctgacgg gagcaggtga gaagctcgca cgagagccct
     4681 gcagctcgct tccggtaagt aagcgctgat cgagcgtgcg cacgacttca cgctcgtgcc
     4741 gtggcgatgc gttggatcgg cacgctccag acgtcggccg agaaggaagc cggcgcgcag
     4801 ccggactgag attcgacggg atgattcgac gagatcgcgc cgagatgtgt ctaacggtcg
     4861 caccggaatt aatcaaattg tgacgacaac ccggccgttt gtcgaatgtt ttcgcgagca
     4921 atcccgagaa acgttgctat ggtgccctcg ggcagtcgga cgattccagt cagacgcgga
     4981 cacgatatgc gcccggcacg aacggccggc gccgccgatg cgttcgcgca ttcaacggca
     5041 atagagcggg aagcgcggca tgaagatcaa gaacgacgcg ctcgggggct ttcttgtcgg
     5101 tcatttgatt gcggcgttgg cgatcttccc gtggttcttc agctggacgg gcgtcgcgct
     5161 ttttgccgtc ggcatttacg tgtttggcgt gcttggaatc aatatcggct accatcggct
     5221 catcacccat cgcagcttct cgtgtccgct ctggctggag cacacgctgg taggcttcgg
     5281 tgcttgctcg ttgcagttcg cgccggcctt ttgggccgcg atccaccgcc gccaccacca
     5341 ttttgccgat gacgagcagg atccacattc cccggtcgtc agcttctttt gggctcattt
     5401 cggctggctg ctggcgcgac ctgccgacat gcggcccggc cccctgaccg agcgctacgc
     5461 caaggacctc ttgcgggata ctttctatgc atggctcggg cggagaaaaa actggatgaa
     5521 gctcgctttc ttatcgtggg ccgcgttttt tgtcgccggg ttgggcgttg ccgcactgtc
     5581 gggggcaagc atgcctggtg cgatccaatt cggttcaagt cttttggttt gggggggcgc
     5641 gttgcggacg gtggtcgtgt ggcacacgac gtggtcggtc aattcggtga cacacatttg
     5701 gggataccgc aattacgaca cccccgacag cagtcgcaac aacgccatcg tcgcgttgct
     5761 cgccggcggc gaaggttggc acaacaacca ccacgccgat cctggctcgg cgcgacacgg
     5821 tcacaattgg tgggaattcg atttgtcctg gttgacggtg cgtgtcctca tgctgcttgg
     5881 gcttgcgacc aacgtcgtcc taccgtcgac gcaccgcgtg gcgatgttta atgcgcacgc
     5941 aaaatcgcgc cagacacccg tgtagtttcg cctggccaca tcgccggcgg tctcatcgct
     6001 cctctctggc ccacgttgcg gcaaggctgc cgatcagcag cacaagcccg agcagaccgg
     6061 cgagtgtgaa tcg
//
LOCUS       DATILV010000106         2656 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2068784, whole genome shotgun sequence.
ACCESSION   DATILV010000106 DATILV010000000
VERSION     DATILV010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2656)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2656)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2656
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2068784"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..627)
                     /locus_tag="VLJ17_02335"
     CDS             complement(<1..627)
                     /locus_tag="VLJ17_02335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HSV21848.1"
                     /translation="MAGVAVCAALPFAAPLAWGETLESALVASYQNNPSLNSQRAATR
                     AIDEGVPQALSGYRPKITVTGIGGEQTSSTTSKTTTAGAPPTYSTVAGYNSPASAAAT
                     ITQTLYNGFQTANKTRQAESQVLAARATLRVTEQTVLLAAATAYMNLLRDTAILDLQR
                     RNVEVLQEQLRQVRDRFNVGEVTRTDVAQSESRLAAGRSQVLTAEANYK"
     gene            complement(837..1496)
                     /locus_tag="VLJ17_02340"
     CDS             complement(837..1496)
                     /locus_tag="VLJ17_02340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HSV21849.1"
                     /translation="MTDFAAARHHMVDGQVRTADVTDLRLISAMQEVARERFVPPAVA
                     ALAYIDLDVPVGEGASASRRLLKPMVLAKLIQAADLTATDRVLDVGCATGYAAAVLAR
                     IAGQVIALEQDAGLAKTADAALASLPNVSVVSGPLPEGWVQGAPYDVVVLEGATEVVP
                     QALCRQLKDGGRLVCVLGSGPGSKAMLYRRSGEETGGRPIFDASAAVLPGFVKPAVFA
                     F"
     gene            1666..1739
                     /locus_tag="VLJ17_02345"
     tRNA            1666..1739
                     /locus_tag="VLJ17_02345"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1698..1700,aa:Cys,seq:gca)
     gene            1851..1925
                     /locus_tag="VLJ17_02350"
     tRNA            1851..1925
                     /locus_tag="VLJ17_02350"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1883..1885,aa:Asn,seq:gtt)
     gene            2053..>2656
                     /locus_tag="VLJ17_02355"
     CDS             2053..>2656
                     /locus_tag="VLJ17_02355"
                     /inference="COORDINATES: protein motif:HMM:NF036998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HSV21850.1"
                     /translation="MIQAYLDRGEEGEAVFEFFVRRLPARRGFLLAAGLDDALRYLET
                     LQFSKAEIDWLKSTGKFRKNLLDYLSAFRFTGDVHAISEGTVCFPNEPLLRITAPLPQ
                     AQLVETRLINILHFQTLIASKAARMVLAAPGKVLADFGLRTAHGAEAGLFSARASYLA
                     GFGGAANVLAGERYGVPIVGTMAHSFVQVHGDEMQAFENFA"
BASE COUNT          484 a          820 c          842 g          510 t
ORIGIN      
        1 cttgtaattg gcttccgcgg tcaacacctg cgagcggccg gcggccagcc gtgattccga
       61 ctgtgcgacg tcggtgcgcg tcacctcgcc gacattgaag cggtcgcgta cctgtcgcaa
      121 ttgttcctgc aacacctcga cgttgcgccg ctgcagatcg agaatcgcgg tgtcgcgcaa
      181 aagattcatg taggcggtcg ctgcggcgag cagcacggtc tgctcggtga cgcgcaaggt
      241 ggcgcgcgca gccaacacct gggactcggc ctgacgggtt ttgttggcgg tctggaaacc
      301 gttgtaaagt gtctgggtga tcgtcgcagc ggccgacgcc ggcgagttgt agccggcgac
      361 agtgctatag gttggcggcg cgcccgctgt tgtagtcttc gatgtggtcg acgacgtctg
      421 ctcgccaccg atcccggtca ctgtaatctt cggacgataa cccgacagcg cctgcggcac
      481 gccttcgtcg atggcgcgtg tggcggcacg ttgcgaattg agcgaagggt tattctgata
      541 ggacgctacc agcgcggatt cgagggtttc gccccacgcc aacggcgcag caaacggcaa
      601 tgctgcgcat acagcgacgc cggccaagag cccgctcacc cacctgttac gtccctgacg
      661 cgacattccg cgacctaacc ccccgcctgt acggcgctat tcaccctttt taactaaata
      721 gaccaactgg gcaccatatg cggacaggcc gggggttaaa acccccctgg tggggcccgc
      781 ccacagaatt gctacatctt gaggcttttg ggccactctt gaaacgggag gcactattag
      841 aatgcaaaaa ccgcaggttt cacgaagccc ggcaggaccg ctgcgctggc atcgaagatc
      901 ggccggccac cggtctcttc gccactgcgg cggtacagca tggccttgga accgggcccc
      961 gaacccaaca cgcagaccaa ccggccaccg tccttgagtt gccgacagag cgcctgcggc
     1021 acgacttcgg ttgcgccttc gagcacgacc acgtcatagg gggccccttg cacccagccc
     1081 tcggggagcg ggccgctgac cacgctgaca ttcggcagcg aagccaacgc cgcgtccgcc
     1141 gtcttggcca ggccggcgtc ctgttcgagc gcgatcacct gaccggcgat gcgggcgagc
     1201 acggcggcgg cgtagccggt ggcgcagccg acatcgagca cgcgatcggt cgcggtcaga
     1261 tcggcagcct gaatcagctt ggcgagcacc atcggcttga gcaggcggcg agaagctgac
     1321 gcgccctcgc cgaccggcac gtcgagatcg atataggcga gcgcggccac agccggcggt
     1381 acgaaacgct cacgcgcaac ctcctgcatg gcggaaatca gccgcagatc ggtgacgtcg
     1441 gcggtgcgga cctgtccgtc caccatatgg tggcgtgcgg cggcaaagtc ggtcatcgcg
     1501 atcctcgaca aaggcgaagg caaagatgga ggaatgcgcg gcttttgtgc ggcaagcttg
     1561 cgcaaaaggc aagccagggg cgaagttgtc ggagcgactt tgctcctata taggctagag
     1621 aattgggcgg gagcgcgcgg ttttcggccg ggcgtgctgt ctgatggcca cgtggcggag
     1681 tggttacgca gaggactgca aatccttgca cgccggttcg attccggccg tggcctccac
     1741 tcacaattgc cggggatttg gcggatttgg cgtcggccca agccggccgt tcacgctttg
     1801 caaagcgttt gggctttgtt ataggcccgt tgcgtaagac cccggcttgt tcctcggtag
     1861 ctcagcggta gagcgttcga ctgttaatcg aaatgtcgct ggttcgatcc cagcccgagg
     1921 agccattctt ttcagcaatc gaggcaaggc caatcgcgga tccaattttt gcgatagtct
     1981 aaagcccgtt ttttgcgagg ggccatgatg ccctcgacca gtcccctgct caccgacctc
     2041 tacgaactca acatgatcca ggcctatctg gatcgtggcg aggaaggcga ggcagttttc
     2101 gaattcttcg tgcggcgact gccggcgcgg cgcggatttt tgctggcagc cgggcttgac
     2161 gatgcgctcc gctatcttga aacgctgcaa ttctccaaag ccgagatcga ttggctcaaa
     2221 agcaccggca agtttcgcaa aaacctgctc gattatctca gcgccttccg atttaccggc
     2281 gacgtgcacg caatctccga aggcaccgtc tgctttccca acgagccgct gctgcgcatc
     2341 accgcaccgt tgccgcaggc gcaactggtg gaaacgcggc tgatcaatat tttgcatttc
     2401 cagacgctga tcgcgtcgaa agccgcgcgc atggtgctgg ccgcgccggg caaggtgctg
     2461 gccgatttcg gtctgcgcac cgcccatggt gctgaggccg ggcttttttc ggcgcgcgca
     2521 agttacctcg cgggctttgg cggcgccgcc aatgtgctgg cgggcgagcg ctacggtgtg
     2581 ccgatcgtcg gcaccatggc gcattccttt gtgcaggtgc acggcgacga gatgcaggcg
     2641 ttcgagaatt tcgcgc
//
LOCUS       DATILV010000107         3376 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4112581, whole genome shotgun sequence.
ACCESSION   DATILV010000107 DATILV010000000
VERSION     DATILV010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3376)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3376)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3376
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4112581"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            460..1143
                     /locus_tag="VLJ17_02360"
     CDS             460..1143
                     /locus_tag="VLJ17_02360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HSV21851.1"
                     /translation="MVNSNCRPAEVIWNYDRVELIADGIVHAIGVSLGLAGAIVIVVV
                     AVNSMHTAGISSIVVYSVGLLSMLGFSAAYNTWPVSQAKWVLRRFDHSAIFVMIAGTY
                     TPFIAQMKGDLVAMGLLIGVWLTAVVGIILKLLWPGRFDRLAVVLYLLLGWSGAAVYE
                     PAVAALPSLSIWLLAVGGALYSTGVVFYAWRSLRFQNVIWHAFVLAAACCHFSAVLFC
                     IARSSVKSS"
     gene            complement(1668..>3376)
                     /locus_tag="VLJ17_02365"
     CDS             complement(1668..>3376)
                     /locus_tag="VLJ17_02365"
                     /inference="COORDINATES: protein motif:HMM:NF013173.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="trehalose-6-phosphate synthase"
                     /protein_id="HSV21852.1"
                     /translation="GRNCHGPGSPLRRLFRTVDGLSPPPDRGKDIGVARRDDALVAEP
                     GGSILARLVVVSNRVSVPSGDGAKRAGGLEVALRPALQHNGGIWFGWSGKVAPADQLE
                     THSVRHKNVEYVVTDLSKDDFEEYYNGFANRVLWPILHYRLDLAEFARRDLSGYFRVN
                     YHFATELEKIIEEDDLIWVHDYHLIPIADALRRCGHANRIGFFLHIPFPSPEVLTSLP
                     KHEQLIPLLLQYDVIGFQTEGDAGNFVRYLLSECDQLREMGLFQTADDQITLSLNGRQ
                     TRIGSFPVGIEPRVFQRLARRNVRSPLVKNLVASLGDRDLVIGVDRLDYSKGLIQRLD
                     AFDIFLTNHSDWIGKVTYLQITPKSRSEIPEYAELAEGLGSAAGRINGKYGEVSWTPI
                     RYVNRVYSRSVLAGLYRTARVGLVTPLRDGMNLVAKEYVAAQDADDPGVLILSRFAGA
                     AIEFRRALLVNPYDAESVAGAIAQALTMPLDERRARHHALLAAISEYDVDRWQREFLA
                     ALRRDDGVREEFPVPAPPMRPRRGRFETAYPDTAAVHWNPAVKVQAHQRLVSAPARGA
                     SR"
BASE COUNT          649 a         1004 c          983 g          740 t
ORIGIN      
        1 ctttagggcg gtttgttcaa tccggcgcgt tgccccccgc gatcgttgga tttttcgctg
       61 acttgcggcg aacttgatcc acaacagcgc gagcccttac atagggattt ctccataccg
      121 gcccttgccg ctgtacattt atacaagcac gctttctgat gggcgcctga gcaaaattgc
      181 tcatttcacg agccccccga ttcatacaac tcgccgcgga ggctagcctc aaaagaaagg
      241 gcctcgccgt tgagcgcgga gacacagcgg ccgttgccac cacatccgac catcaagcgt
      301 accggcggcg tcgaataagt ctgcgcactt gcgacgcgcg agatgtgcag atcttcatgc
      361 aattcatcga tttatacttc gacaatggct gagacaggag gcttgctgtc attcaaaggt
      421 ccgaattcag tgcaataggt ctagagcgga gaagcactca tggtcaattc gaattgccgg
      481 ccggcagagg tcatctggaa ctatgatcgt gtcgagttga tcgctgacgg catcgtccat
      541 gcaatcggag tgagcctcgg gttggctgga gcgattgtga tcgtcgtcgt tgcggtcaat
      601 tcgatgcaca ccgctggaat ctcgtccatc gtagtctact ctgtcggctt gctctcgatg
      661 ctcggtttct cggctgccta caacacatgg cctgtttcgc aagcgaagtg ggttctgcgc
      721 cgcttcgatc actccgcgat tttcgtgatg atcgccggaa cctacacgcc attcatagcg
      781 cagatgaaag gcgaccttgt tgcgatgggc cttctcatcg gtgtctggct tacagcggtc
      841 gtgggcatca ttcttaagct gctgtggcct ggtcgcttcg accgtctggc cgttgttctc
      901 tacctgcttc ttggttggag tggcgcggct gtttacgagc cggccgtggc agctctcccg
      961 agtttgagca tttggcttct cgcggtaggt ggcgcgcttt actccacggg cgtggtcttt
     1021 tatgcgtggc ggagtttgcg atttcaaaat gtgatctggc atgccttcgt actggctgcc
     1081 gcatgctgtc acttttcggc cgtgctcttt tgtattgcga gaagctcggt gaaatcctcc
     1141 taatgttccc gagcggtacg caaacgagga aaatattgcc ttcgggcgtg gtaccacgac
     1201 tgtcgcgccc caccctcggg tttggcttgt gactgccctc tttcaaggcc cgaagcaaat
     1261 gcaaaccggg cacctcctgt accatctttc cgcgacagac ggggcacata ctggactcca
     1321 gttcgtcttc aaacgacacg gcacgtccta ccctcagcca tcgtctagat acaaacaatc
     1381 ggcgcgattc tcccggcgga aagtggccgg ccacacgaaa ttgcaattag gacaccttac
     1441 gtttcgggcc ttaatgcaaa acatagccgt gctgatcgag ttacgtctgt acaaaattgc
     1501 tgaagagggc ggccgggctt ctcgacagga tcgagcgtgg cattcgccgg tcccaactgt
     1561 cggcgtcagt cggtcatcta tccggatgtg acgcaagaac gcggtcgcgt catttgtcgc
     1621 acttgcggca cctttctcga tacgctcgcg caattccacc gtttcgttca gcggcttgcg
     1681 ccacgggccg gcgcggatac gagccgttgg tgcgcctgca cctttacggc tggattccaa
     1741 tgcaccgcgg ctgtgtctgg ataggcggtt tcaaatcttc cacgtcgggg tctcatcggc
     1801 ggcgccggga ccggaaactc ctccctcacg ccgtcgtcgc gccgcagggc cgcaaggaat
     1861 tccctttgcc accgatcgac gtcgtattcg gagatagcag caagcagcgc atggtggcgg
     1921 gcgcgtcttt catcgagcgg catcgtgagc gcttgcgcga tcgcgccggc caccgattcc
     1981 gcatcatagg gattgaccag cagcgcgcgc cggaattcga tggcggcgcc agcgaagcgg
     2041 gacaagatga ggacgcccgg atcgtccgcg tcctgagcgg cgacatattc cttcgcaacg
     2101 aggttcatgc cgtcgcgcag cggcgtcact aggccgacgc gtgccgtccg atagagcccc
     2161 gccaggaccg accggctgta gacgcggttc acatagcgga tcggcgtcca tgacacttca
     2221 ccgtatttgc cgttgatacg gccagcggcg gagcccaagc cctctgccaa ttcggcatat
     2281 tcgggaattt ccgagcggct tttcggcgtg atttgcaggt atgtcacctt gccgatccaa
     2341 tcgctgtgat tcgtaaggaa gatgtcgaaa gcatcgagac gctggatcag gcccttggaa
     2401 tagtctaggc ggtcgacccc gatcacgagg tcgcggtcac cgaggctcgc caccaggttc
     2461 ttcaccaagg gagaccgcac attgcggcgc gccaatcgtt gaaatacccg cggctcgatt
     2521 ccgaccggaa aactgccgat ccgggtctgc cgcccgttca ggctcagggt gatctggtcg
     2581 tcggccgtct ggaatagtcc catttcccgc agttgatcgc attcagagag caggtagcga
     2641 acgaaattcc cggcatcgcc ttcggtctgg aagccgatga cgtcgtattg cagcagcaat
     2701 ggtatcagct gctcgtgctt cggcagcgag gtcagaacct ccggcgaggg aaatgggatg
     2761 tgcaggaaaa acccgatccg gttagcgtgg ccgcagcgcc gcaacgcgtc cgcgatgggg
     2821 atcagatggt agtcatgaac ccaaatcaga tcgtcttctt cgatgatctt ttccagttcg
     2881 gtcgcgaaat gatagttgac ccggaaatag ccgctgagat cccggcgcgc gaactcggcg
     2941 aggtccaacc gataatgcag gattggccag agcacgcgat tagcgaagcc attgtagtac
     3001 tcctcaaagt cgtccttcga caggtcggtg acgacatatt cgacattctt gtgccggacg
     3061 gagtgcgttt ccaactggtc cgcgggcgcg accttgccgc tccagccgaa ccagataccg
     3121 ccgttgtgct ggagcgccgg tcgcaacgcg acttcgagcc cgccggcgcg cttggcgcca
     3181 tcgccggaag gaactgaaac gcggttcgaa acgaccacta gtcgcgccaa tatcgatcct
     3241 cccggctccg cgacaagggc atcgtccctc cttgcgactc caatatcctt gccgcgatcg
     3301 gggggcggcg acaacccgtc gacagttctg aacaaccgcc gcaatggtga ccccgggccg
     3361 tggcaattgc ggccgg
//
LOCUS       DATILV010000108         4733 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_791925, whole genome shotgun sequence.
ACCESSION   DATILV010000108 DATILV010000000
VERSION     DATILV010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4733)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4733)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4733
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_791925"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..543)
                     /locus_tag="VLJ17_02370"
     CDS             complement(<1..543)
                     /locus_tag="VLJ17_02370"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV21853.1"
                     /translation="MLARFATGRDIGALLTARLLCLLLLITTPVQAANLQGVGAVFLH
                     GKGVWTGAFDGGIPAALEAEGAVTAAPEMPWSLGRIYGATYDEAMREIDAAVGGLRAK
                     GATRIVIIGHSLGANAAIGYAARRRGVAAVVALSPGHLPETTEMRARTGAAIVEARAL
                     LAAGEKSRRVWPDRIQGVPTF"
     gene            complement(548..1312)
                     /locus_tag="VLJ17_02375"
     CDS             complement(548..1312)
                     /locus_tag="VLJ17_02375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018391358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HSV21854.1"
                     /translation="MKDEAQIVTAGMLVIGDEILSGRTKDRNIGYIAEYLTTIGIDLR
                     EVRVVADEEDAIVEALNALRLRYTYVFTTGGIGPTHDDITADSVAKAFGVAIDVDPRA
                     VALLKERYAAMGTELNEARMRMTRVPKGAELVPNKVSAAPGFWIGNVIVMAGVPSIMQ
                     AMLDAVAPKLRTGIKMLSETVRADCREGDLGTELGEVAKAHPEVMIGSYPFVDDVRGP
                     NTNIVVRGRDPERLVAAKAAVEDMLEKVRARIVAQG"
     gene            1562..3439
                     /locus_tag="VLJ17_02380"
     CDS             1562..3439
                     /locus_tag="VLJ17_02380"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="feruloyl-CoA synthase"
                     /protein_id="HSV21855.1"
                     /translation="MDPTTRETESAPYRPIDFGPVNIVCNSLPDGGYRLRSRIPLASY
                     TPSLGRLFRAAVEARPDQVFLAERFGDGWRTLTYAACRPIVDAIAAEFVERGLSAQRP
                     AMVLSGNSIDHALLMLAAYTAGIPIAPISVAYSLQSRDHAKLKQIAALLQPGLIYVAD
                     TAPFASALSALDLAGVEILASRNSAKLEGVVLLASLIATRPGGAVERAFASSNTATIA
                     KFLCTSGSTGHPKGVFYTHGMLTANQQQIAQIWPFLAEEPPVLVDWLPWNHTFGGNHN
                     FNLVLRHAGTLYIDGGKPMPGLVGETVRNLSEVSPTVYFNVPAGYAALLPHLERDEAF
                     AKSFFAKLRFIFYAGAALPQDLWTRLEAAAVWATGKRIPLTSSWGTTETAPLATASHF
                     LTDRSGMIGVPAPGVEVKLVPRDDKLEIRVRGPNVTPGYWKRPDLTAEAFDEEGFYRP
                     GDAVRFADPDDVAKGVMFDGRLKEDFKLATGIWVHVGGLRVGVLAAASPALLDAIVVG
                     ENLPFIGLLAWLNPAGCYRLTGWDASLVELARHPKVRDHLRSAMSHWNAAHPGSSERI
                     SRVLLLPDTPSIDANEITDKGYINQRAATAFRHREIALLYAEVPGPEIIEVGTADSSI
                     A"
     gene            3902..>4733
                     /locus_tag="VLJ17_02385"
     CDS             3902..>4733
                     /locus_tag="VLJ17_02385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008965411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="circularly permuted type 2 ATP-grasp protein"
                     /protein_id="HSV21856.1"
                     /translation="MAAFDEMRDGDGRVRPVYAGLDKWLGELAPDVLDHRRREAEFLF
                     RRIGITFAVYGEADSTERLIPFDVLPRIISACEWNTLRTGLQQRVKAINLYIKDVYGR
                     REILRAGIMPDDLVFQNPVFRPEMNGLHVPHDIYVHIAGIDIVRVDADFYVLEDNART
                     PSGVSYMLENREIMMRLFPELFSRHRVAPVENYPDELLATLKSVAPKTASSDPTVALL
                     TPGIYNSAYYEHSFLADKLGVELVEGRDVVVKGQVAYMRTTEGLKRIDVIYRRIDDDF
                     L"
BASE COUNT          837 a         1574 c         1395 g          927 t
ORIGIN      
        1 aaaggtcgga acgccttgaa ttcgatcggg ccacacacgt cgcgattttt ctccggcggc
       61 cagcaatgcc cgcgcctcga cgatggccgc accggtgcgg gcgcgcattt cggtggtctc
      121 cggcaagtgc ccaggcgaaa gtgccaccac cgcggcgacc ccgcgacggc gcgccgcgta
      181 gccgatcgcc gcattggcgc cgaggctgtg gccgatgatg acgatgcggg tcgcgccctt
      241 ggccctgagc cccccgacgg ccgcatcgat ctctcgcatc gcctcgtcat aggttgctcc
      301 gtagatgcgg cctaacgacc atggcatctc cggggctgcc gttactgcgc cttccgcctc
      361 gagcgccgcc ggaataccgc cgtcgaaggc gcccgtccat acgcccttgc cgtgcagaaa
      421 taccgcgccg accccctgca ggttcgcggc ctgaacgggc gttgtgatca gcaacaacag
      481 acagagcagc cgcgccgtca agagcgcgcc gatatcgcga ccagtagcaa accttgccag
      541 catctctcta tccctgcgcc acaatccgcg cgcgtacctt ctcaagcatg tcttcgaccg
      601 cggccttggc ggccacaagt cgctccggat cacgtccgcg tacaacgata ttggtgttcg
      661 ggccgcgcac atcgtcgacg aacgggtagc tgcctatcat gacctccgga tgggccttgg
      721 ccacctcgcc gagctcggtt cccaagtcgc cttcgcggca atctgcccgc acggtctcgg
      781 acaacatctt gatgccagtc ctgagtttcg gcgccaccgc atcgagcatg gcctgcatga
      841 tcgaaggtac gcccgccatc acaatcacgt tgccgatcca gaagccaggc gccgccgaaa
      901 ccttgttcgg tacaagttca gcgccctttg gcacgcgcgt catacgcatg cgcgcctcgt
      961 tcagctcggt ccccatagcg gcgtagcgct ctttcaacaa ggcaaccgcg cgcggatcga
     1021 cgtcgatcgc aaccccgaac gccttggcga cgctgtcggc cgtgatgtcg tcatgggtcg
     1081 gcccgatgcc gccggtggtg aatacgtaag tgtaacggag gcgcagcgcg ttgagcgctt
     1141 cgacaatcgc atcctcttcg tcggcaacga cgcggacttc ccgcaggtcg atgccgatcg
     1201 tcgtcaggta ttcggcgatg tagccaatgt tcctgtcctt tgtgcgcccg gacaggatct
     1261 cgtcgccgat caccagcatg ccggccgtga cgatctgcgc ctcatctttc atcgcatgtt
     1321 ccgcttggct gccattgtgg tgacaacaga ttttgcagcc accgtctatg gtcaagtcag
     1381 gacttcatag actgatcctc agcctttcca caacacaggc acccaccgct cgaagcccca
     1441 ggggcagaaa gcaatcccgg gtttcggtct gcagagctgg cgggcattgt cagaggccta
     1501 tgcggcggac tacaaagcgc agattgcgtc ggcggagtgt agtcgtaacg tattagaacc
     1561 catggaccca acgacacgcg agaccgagtc agccccttac cgaccgatcg atttcgggcc
     1621 ggtaaacatc gtatgcaact ccctaccgga cggcggctat cggctgcggt cgcgcatacc
     1681 gctcgcgtcg tacaccccga gcctcggccg cttgtttcgc gccgcggtgg aggcgcggcc
     1741 cgatcaggtg tttcttgccg aacgcttcgg tgatggctgg cgcaccctca cctatgcggc
     1801 ctgccgtccg atcgtcgatg cgattgcggc cgaattcgtc gagcgtggac tatctgcgca
     1861 acggcccgcg atggttctgt cgggcaacag catcgatcat gcgctgctga tgcttgccgc
     1921 ctatacggcc ggcattccga tcgcgcccat ctcggtcgct tattcgttgc aaagccgcga
     1981 tcatgccaag ctcaagcaga tcgcggccct gcttcagccg ggcctgatct atgtggccga
     2041 taccgccccg ttcgcgagcg cgctgagcgc gcttgatctt gctggcgtcg agatcctggc
     2101 gagccgcaac agcgccaagc ttgagggtgt tgtcctactg gcgtctctca tcgccactcg
     2161 gcccggcggc gccgtcgagc gggcattcgc atcaagcaat accgccacca tcgcgaaatt
     2221 cctgtgcacg tcgggctcga ccgggcatcc caagggcgtc ttctacaccc acggcatgct
     2281 gacagccaat cagcagcaga tcgcccaaat ctggccgttc ctcgccgagg agccgcccgt
     2341 cttggtggac tggctgccgt ggaatcacac cttcggcggc aaccacaatt tcaacctcgt
     2401 cctgcgccac gccggcaccc tctacatcga cggcggtaag cccatgcctg ggttggtcgg
     2461 cgagaccgtg cgtaaccttt cggaagtttc cccaaccgtc tatttcaacg tgccggccgg
     2521 ctatgcggca ttgctgccgc acctcgagcg cgacgaagca ttcgcaaaaa gcttctttgc
     2581 caagcttcga ttcattttct atgcgggcgc ggcgctgccg caggatttat ggacgcgtct
     2641 cgaagccgcc gcggtctggg caacaggcaa gcgtattccg ttgacttcgt cctggggcac
     2701 taccgaaact gcgccgctcg ccaccgcgtc gcatttcctt accgaccggt ccggcatgat
     2761 cggggttccg gcgccaggcg tcgaggtgaa gctcgtgccc cgggacgaca agctcgaaat
     2821 acgggtgcgc ggccccaatg tgacgcccgg ctattggaaa cggccggacc tgaccgccga
     2881 ggcgttcgac gaggagggct tctatcggcc gggcgatgcg gtgcgtttcg cggatccgga
     2941 cgacgtcgct aaaggcgtaa tgttcgacgg gcgcttgaag gaggatttca aactcgcaac
     3001 cggcatttgg gtccatgtgg gcggactgcg ggtcggcgtg ctcgccgccg cctcgccggc
     3061 cctgctggac gccattgtgg tcggcgaaaa ccttccgttc atcggcctgc tcgcctggct
     3121 gaaccccgcc ggctgttacc gcctgaccgg atgggacgca agccttgtcg agcttgcccg
     3181 gcatccaaag gtgcgggatc atctccgcag cgccatgtcg cattggaacg ccgcacaccc
     3241 gggctcctcg gaacgtatct ctcgggtgct gttgctcccc gatacgccat cgatcgacgc
     3301 caatgagatc actgacaaag gctacatcaa ccagcgcgcc gccaccgctt tccgtcaccg
     3361 cgaaatcgcg ctgctatacg ccgaagtgcc tgggccggag atcattgagg tgggaacggc
     3421 cgattcatcg attgcctaaa tattaagcga ttagtggata gcattcgatc tccgtttagg
     3481 gggcgttttc aaatgcaatg gcattttggc caggggcggg tgatgggcct ctccgcgagt
     3541 ccgagcttgc cgaaaagccc tctcaccccg tgcctgctcc taggcgctag gttaggtcgt
     3601 ggccgagccg ctgcggctct cctcgcccct tatgggggga gggcacgtac gcgccccacg
     3661 actcgccctc cacccccgac ttctccctac ggggaggagt tcgcagcgcc gtcatcgctt
     3721 acccggagag ggggtagagg cgccgtgcca aatgcgactg ctccatatcc ttgcccagac
     3781 ctccttgcgt tgtccccgaa tgaggctgaa tctgccatag atcacgtgca tttggcgcaa
     3841 agcttgctac gctcactttc atcgaacagg gctcgcaaac cgtggagccg ccgaggcggc
     3901 gatggcagca tttgacgaaa tgagagacgg cgacggccgg gtgcgaccgg tttacgcagg
     3961 cctcgacaag tggctgggcg agctagcccc cgacgtgctc gaccatcgcc gtcgcgaggc
     4021 ggaattcctg tttcggcgca tcggcatcac cttcgcggtc tatggcgagg cggactcgac
     4081 cgaacgattg attcccttcg atgtgctccc gcgcatcatc tcggcctgcg aatggaacac
     4141 gctgcgcacc ggcctccaac agcgcgtcaa ggcgatcaat ctctacatca aggatgtcta
     4201 cgggcgtcgc gaaatattgc gtgccggcat catgccggat gatctcgtgt tccagaaccc
     4261 ggtcttccgt ccggaaatga acgggcttca cgttccccac gatatctatg ttcatatcgc
     4321 cggcatcgac atcgtgcggg tggacgccga cttctacgtt ctggaggaca atgcccgcac
     4381 gccctccggc gtctcctata tgctggagaa ccgcgagatc atgatgcggc tatttcccga
     4441 gctgttctcg cgccatcgcg tggcgccggt cgagaactac ccggatgaat tgctcgccac
     4501 cctgaagtcg gtggcgccca agacggcttc ctctgatccg acggtggcgc tgctcacgcc
     4561 cggcatctac aattcggcct attacgaaca ctccttcctc gccgacaagc tcggtgtcga
     4621 actggtcgaa ggtcgcgacg tggtcgtcaa gggccaggtc gcctatatgc gtaccactga
     4681 ggggctcaag cgcatcgatg tcatctaccg gcggatcgat gacgacttcc tcg
//
LOCUS       DATILV010000109         4184 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2069801, whole genome shotgun sequence.
ACCESSION   DATILV010000109 DATILV010000000
VERSION     DATILV010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4184
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2069801"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1142
                     /locus_tag="VLJ17_02390"
     CDS             <1..1142
                     /locus_tag="VLJ17_02390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21857.1"
                     /translation="ASAGTDPIFRLVDGATCPTDDVSTLDAKAQAYSLLNDKGLIRVG
                     LPLPSAPDLEFSVASVDDPYGCITDPATGLTSPTTGIVSTYRRPLPSTNLGFLSTIMW
                     DGRESSFMQQAIDATLGHAQADVAPTVDQQQQMVDFETGIFTAQISDDNAGSLEAHGA
                     TGGPVALSQQLAKFFIGVNDPVGLNPTGAPFDPNIFDLYKTWLALGFGDHKLKHRLSI
                     ARGEEVFNTTPINITGVTGLNDALNLPSIAGFCGTCHDTPNVGNHSVKAPLNIGIANA
                     GADSPPALDISGLPVLTLQCNSGPLAGQTFVVTDPGRALISGKCADIGKLKGPILRGL
                     ASRAPYFHNGSAATLADVVDFYDLRFGIGFTAQEKTDLVNFLNAL"
     gene            1669..3123
                     /locus_tag="VLJ17_02395"
     CDS             1669..3123
                     /locus_tag="VLJ17_02395"
                     /inference="COORDINATES: protein motif:HMM:NF021523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2252 domain-containing protein"
                     /protein_id="HSV21858.1"
                     /translation="MEKVIKAVRLKANVDPSFYRMLGARGEQALVESFMMKRPSVIQR
                     MAAGKTLRERVPRASHATHDKRADRLDPIEILERQNATRVQKLVPVRYGRMLATPFAF
                     LRGSAAVMASDLSTSPVSGILVAACGDMHVKNFGVYASAERDLVFSINDFDEIYVGPW
                     EWDLKRLAASAAVAAQFMGGNEAQSEEAARECVRSYRKRIRRYAQMGYLEVWYDRIDE
                     RAVLDSLTPKARRIARHIMEKARGRGHISTLDRLTEQVNGRHRFIEDVPLIVRETRTA
                     RGNPIKPELDHLLHAYIDSLNYDRKVLLSRYRIVDVARKVVGVGSVGTECWVLLLRGV
                     NDDDPVFLQVKEAQPSVLAPYVDVKLPFDHQGHRVVFGQRLTQGSPDIFLGWGTAEGR
                     EFYIRQLADMKGGADLNNIEILSDYCGLCGWALALAHAKSGDAAMIAGYCGRSAALDE
                     AIGKFAISYARQTEQDHEALAQAKRIGRIRVAIE"
     gene            3281..4078
                     /locus_tag="VLJ17_02400"
     CDS             3281..4078
                     /locus_tag="VLJ17_02400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSV21859.1"
                     /translation="MTILKWIVVLAGVGYFAFVAFLYLAQRTLLYHPRSTHPSPAGAG
                     LPMAEEVVLDTADGERVIVWQVPPRGEKPVVIYFHGNAEIVASRAERHRELTADGVGL
                     VALSYRGYMGSTGSPTEEGLLRDAEAAYRFATMRHPSSPIVLWGHSLGSGVAVALASR
                     HSVAKIILEAPFSSTVDVAAGMFPFAPVRRLMRDQFRSDQRIDAVRAPLLIMHGAQDW
                     VVPIRLGERLFELAHEPKRFVRFPNGGHDDLDRYGASAQVRQFIAER"
BASE COUNT          814 a         1271 c         1274 g          825 t
ORIGIN      
        1 ccgctagtgc gggcacagat ccgatttttc gcctggtcga tggcgccacc tgtccgaccg
       61 acgatgtatc gacgctcgat gccaaggccc aagcctatag tttgctgaac gacaaaggct
      121 tgatccgcgt cggactacca ctgccgtcgg caccggattt ggagttctcg gtcgcctccg
      181 tggacgatcc ctacggctgc ataaccgacc cggccaccgg cctgacgtcg ccgacaacgg
      241 gtatcgtatc gacttatcgc cgcccgctgc cttcaaccaa tctcggcttc ttgagtacaa
      301 ttatgtggga tggacgcgag tccagcttca tgcaacaggc catcgacgcc accctcggcc
      361 atgcacaagc cgatgtggcg ccgacagtcg accagcaaca gcaaatggtc gacttcgaga
      421 ccggtatttt caccgcgcag atttccgacg acaacgcagg cagcctggag gcacacgggg
      481 caaccggcgg ccccgttgcg ctttcacagc agcttgccaa attcttcatc ggggtgaacg
      541 atccggttgg gctcaatccc actggcgcgc ccttcgatcc aaatattttc gatttgtata
      601 agacgtggct ggccctcggg ttcggagacc acaagttgaa acatcgcttg tcgatcgcgc
      661 gaggcgagga ggtgttcaac accacgccga tcaacatcac cggggtgaca ggccttaatg
      721 acgcgctcaa cctgccgagc atcgcgggat tctgcggcac ctgccacgat acccccaatg
      781 tcggcaatca ttcggtcaag gcacccttga acatcggcat cgccaatgcc ggcgccgata
      841 gtcctccggc actcgatatt tcgggattgc ccgtcctcac cctgcagtgc aatagcggtc
      901 cgctcgcggg gcagactttt gtggtgacgg atccgggtcg cgcactcatt tccgggaaat
      961 gcgccgacat cggcaagctc aaaggcccca tcttgcgtgg cttggcctcg cgcgcgccgt
     1021 attttcacaa cggctccgca gccacgctgg cggacgtggt agatttttat gacctgcggt
     1081 tcggcattgg cttcaccgcg caggagaaga ccgacctggt caattttctc aacgctctct
     1141 aatttgctga gagcgttccc gaatcgattg aatcaagtgc cctttcgtca tgcccgcgca
     1201 aaaacacccc gccgcgtcac gcggcgggga ccccgtcttc gcgggcatcc acgtccttct
     1261 tgctgcgctt cagccagcaa ggcgtagatg gcccggacaa gcaccgccat gactccggag
     1321 aaaattgctc accgtaatcg ggaagtgtta agggcgccgt tgctccgaat tccggactgc
     1381 acaatttcgt caacagggct ccccacggcc agtgtgcggc tgcgttctaa agcagagcct
     1441 gcaggacaac agcccggcgc gcgcattccg atcatccggt attcaatagg aaccaacgaa
     1501 tgctttgttc caagcagttc aagtactagc atatgcggga gcaacaccgc tcctgttggg
     1561 actctcgcga gcggtggggc gcgccgacgt atcgggcgaa tcaatacgca gcataaatgc
     1621 cggccggccg cgcgccacgc aggggccggc acgaaagcgt catagcaagt ggagaaggtc
     1681 ataaaggcag ttcgcctgaa ggccaatgtc gatccgagtt tctaccgcat gctcggggcg
     1741 cgtggggaac aggccttggt cgaaagcttc atgatgaagc gcccctcggt catccagcgt
     1801 atggctgccg gcaagacatt gcgtgagcgg gtgccacgtg cgtcgcatgc aacccacgac
     1861 aaacgcgcgg accggctcga tccaattgag attttggagc ggcagaacgc tacgcgcgta
     1921 caaaagctcg tgcccgttcg ctatggccgc atgcttgcaa ccccatttgc attcttgcgt
     1981 ggctcggcgg cggtcatggc gagcgacctg tcgacctcgc cggtgtccgg cattctggtc
     2041 gcggcatgcg gtgacatgca cgtgaagaac tttggcgtct acgcatcggc cgaacgcgat
     2101 ctggtctttt cgatcaacga cttcgacgag atctatgtcg gcccttggga gtgggacctc
     2161 aagcggctgg cggctagcgc ggctgttgcg gcgcaattta tgggcggcaa tgaggcgcaa
     2221 tccgaagagg cggcccgcga atgcgtgcgt tcctaccgca agcgcatccg tcgctatgcc
     2281 cagatgggat acctggaagt ctggtatgac cgcatcgacg agcgcgccgt gctcgactcc
     2341 ctgacgccaa aggcgcgccg aatcgcccga cacatcatgg aaaaggcgcg ggggagggga
     2401 catatcagca cgctcgatag attaaccgag caggtgaacg gccggcatcg cttcatcgag
     2461 gatgttccgc tgatcgtgcg cgaaacgcgt accgcgaggg gcaatccgat caagccggag
     2521 ctggaccact tgctgcacgc ttatatcgat tcattgaatt acgatcgcaa ggtgttgctg
     2581 tcacgctacc ggatcgttga cgtggcgcgc aaagtggtgg gcgtcggaag tgtcggcacg
     2641 gagtgctggg tgcttctgct gcggggtgtc aacgatgacg atccggtttt tctccaggtc
     2701 aaggaagcac agccgtccgt cctggcgccc tatgtcgacg tcaagctgcc attcgaccat
     2761 cagggtcacc gggttgtctt tgggcaacgc cttacacaag gctcgcccga catttttctg
     2821 gggtggggaa cggctgaagg aagggaattt tacattcgtc agcttgcaga catgaagggc
     2881 ggtgccgatc tgaataatat tgagattcta tccgactact gcggtctgtg tggctgggca
     2941 ttggcactag cgcacgccaa gtcgggcgac gcggcgatga tcgcgggtta ttgcggcaga
     3001 agcgccgcac ttgacgaagc gatcggcaag ttcgcgatca gctatgcgcg gcagaccgaa
     3061 caggaccacg aggcgctcgc gcaagccaag cgcatcggcc ggatcagggt cgcgatagaa
     3121 tgagctccag ggcggcgctg cctgcgccgg acgcggtagc actcaaagga tcatcgtgac
     3181 aacagacgat acgccgagta cgacagggat cgcggcgatc actatggcgt acaagcagtg
     3241 attctgccag cgatcgatcg gtagcgtcgg gcctgcttcc atgaccattc tgaaatggat
     3301 cgttgtgctt gccggcgtgg gctatttcgc ctttgtcgca tttctctacc tggcacagcg
     3361 cacgctttta tatcatccgc gatctacgca cccttcacca gccggcgccg gattgccgat
     3421 ggccgaggaa gtcgtcctcg acaccgctga tggcgagcga gttatcgtgt ggcaggtgcc
     3481 gccgcgcggc gaaaagcctg tggtgatcta ttttcacggc aacgccgaaa tcgtggcctc
     3541 acgtgccgag cggcaccgcg agttgacggc ggacggcgtc ggcctcgttg cgctctccta
     3601 ccgcggctac atgggctcaa ccggaagccc gaccgaggag ggcctgctgc gcgacgccga
     3661 ggcggcgtac cggttcgcga caatgcgcca cccatcgagc ccaatcgtgt tgtggggaca
     3721 ttcgctcgga tctggcgtgg cggtagcgct ggccagccgg cattcggtcg ccaagattat
     3781 cctggaggcg ccgttttcat cgaccgtcga cgtcgccgcc gggatgtttc ccttcgcgcc
     3841 agtccgacgg ctgatgcgcg accagttccg gtcggaccag cgcattgacg cggtgcgggc
     3901 tccgctgctg atcatgcatg gcgcgcagga ctgggtggtt ccgatccggt tgggcgagcg
     3961 gctgttcgaa ctcgcccacg aacccaaacg ttttgtgcgc tttcccaatg gcgggcacga
     4021 cgatcttgat cgatatggcg ccagtgcgca ggttcgacaa tttatcgcgg agcgctagga
     4081 atagccgtcg aaacttgccc tgtctcggcg ccgccgcgct cttccacggg cggtcagcac
     4141 gatccgagaa gatttcatgg ccccgccgtt ctcgacgcgc acca
//
LOCUS       DATILV010000110         4417 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1558767, whole genome shotgun sequence.
ACCESSION   DATILV010000110 DATILV010000000
VERSION     DATILV010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4417)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4417)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4417
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1558767"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..209
                     /locus_tag="VLJ17_02405"
     CDS             <1..209
                     /locus_tag="VLJ17_02405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21860.1"
                     /translation="GSADGSSDVGSGTQWLLRDLFARLANMGQGDALEKMRAGEVGAT
                     ILTSEQRNKLFSDYLEWTRTRERR"
     gene            complement(340..1746)
                     /locus_tag="VLJ17_02410"
     CDS             complement(340..1746)
                     /locus_tag="VLJ17_02410"
                     /inference="COORDINATES: protein motif:HMM:NF038122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NF038122 family metalloprotease"
                     /protein_id="HSV21861.1"
                     /translation="MPAAAQAAFNNLIQLYENTFSNPITIKLDVRFGNTGLGSSSTNT
                     VSVPYSVWVDHLKANATANPQNTFENEALSNLPVSDPLGDGNVILTTADARAIGISQG
                     EVIAGNLTPQFDSTITFSSHANVNFEYNQVATSGHFDFMDVAAHELNEALGIGSALTN
                     LANNGTVPVGDFEAEDYFRYQTGSTARDITLNPTADVSFSYDGGKTDVAQFNQDDDFG
                     DRNDWIYGNGSSPPSNPFVQDAVAFPGQVAPILISSAGQTPESTVLSVLGYDEMPCYY
                     EGSLIRTPNGEIPVEALCDSDYVLTADGHPAAVTWIGHRRVSARFADPLRAYPIRIKA
                     NALAENVPSRDLLLSPDHAILVDNILIQAGALVNGVSILRESVVPQVFTYYHIELNDH
                     SLILAENTPAETFIDNIDRAAFENWGDHEALYPGGKSLIEMPYPRAKSYRQVPQRIRQ
                     RLLERGIALFGKAAENVA"
     gene            complement(2338..3111)
                     /locus_tag="VLJ17_02415"
     CDS             complement(2338..3111)
                     /locus_tag="VLJ17_02415"
                     /inference="COORDINATES: protein motif:HMM:NF024986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HSV21862.1"
                     /translation="MLDCLLPRAVLAVTLVIAFGASVSRADGEVDFLAGKTRACVKCV
                     LEKAQLKRRDLAGVDLSGANLTRAVFHRSRLVGADFAGADLAGANLNKTDLKNASFAN
                     ANVPNGMFYEADLSVANFTGAILVEAKMGKARMVRTILDNAKLTEAILTGARLDDAAL
                     KGAELQRANLIGVTLRRANLEGANLEDSGLIDAVMREANLKGANLSGADLFGADLTGA
                     DLTGADLSESRLSRAILTDAKLDGVNFKGALMPDGSTHE"
     gene            3210..3953
                     /locus_tag="VLJ17_02420"
     CDS             3210..3953
                     /locus_tag="VLJ17_02420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21863.1"
                     /translation="MPNVARLNASMCRFGFLIAAAVLAGAPGVLLAQRTDERPVRREV
                     WDIQLGAKVADLPDDFVDYACGTNGGPPSTPLTGWKDYRRCRGDVNGLREVYFRYDDE
                     LEYWAKANNLTAQMEQYVGTKTYGFPINVSVLIGDDVVRGIRIVSDPRDPTGDREEAY
                     LLRNFLSARFGREGWLCEDLAAEPGETPVTGIFIKQRCQKDMEGGVHGLMVTRHLRKP
                     GQSQFDPQSGKETTNQFESNVRFELTKMK"
     gene            complement(3962..4375)
                     /locus_tag="VLJ17_02425"
     CDS             complement(3962..4375)
                     /locus_tag="VLJ17_02425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21864.1"
                     /translation="MNICKFIVPAVAAAIQLSPASAQDVSFGDRLFHDKADCQFCHGP
                     NGDGRGDPRSPGRAANLHETKLNRVQLIEVIACGRPATEMPHFDKYAYEDSDCYGLKG
                     KDLGADAPRDPHSTPLTKREIEAVTDYIIKTFVGK"
BASE COUNT          938 a         1228 c         1313 g          938 t
ORIGIN      
        1 gtggcagtgc ggacggctcg agcgatgtcg gcagcggtac gcaatggctg ctgcgggacc
       61 tgttcgcacg cctcgccaac atgggtcagg gtgacgccct tgagaaaatg agggccggtg
      121 aggtcggcgc gaccattctg accagcgaac agcgcaataa gctgttcagc gactatctcg
      181 aatggactcg cacgcgcgag cgccgctaga tggacgcccg gatgcggcga ccgcctcttt
      241 gcggtcgctg catgacctca ccttcgcaaa atgaacacgc gccatagttt cgcagattgg
      301 gcgccgcatg gggcgcgtgt tacggtcgaa cgcctaaatc taggcaacgt tctccgcagc
      361 tttgccaaat agcgcaatgc cacgctccag aaggcgctgg cggattcgtt gaggcacttg
      421 acggtaggat ttggccctcg gatacggcat ctcgatcaga gacttgcctc ctggataaag
      481 tgcctcatga tcgccccaat tttcaaatgc tgcgcgatcg atattgtcga tgaacgtttc
      541 ggcaggtgtg ttctcggcga gaattaagga atgatcattg agttcgatgt ggtagtaggt
      601 gaacacctgc ggcacaacgg attctcgcaa gatcgacacg ccgttgacca gtgctccggc
      661 ctgaatcaat atattatcga ctaagattgc atgatctgga gacaatagca gatcgcgaga
      721 aggcacattt tcagccaatg cgtttgcttt tattctgatc ggatacgcgc gaagcggatc
      781 ggcaaagcga gccgatactc tcctatgccc gatccaagtc actgctgcgg ggtgtccgtc
      841 ggccgtgagc acatagtcgc tatcgcaaag cgcttcgacc ggtatttcgc catttggcgt
      901 gcggatcaac gaaccctcat agtagcaggg catctcgtca tagccaagaa cgctgagcac
      961 ggtcgactcg ggagtttggc ccgcagaaga aatcaaaatt ggagctactt gtcctgggaa
     1021 cgctaccgca tcttggacaa aagggtttga tggtggggag cttccatttc cgtaaatcca
     1081 gtcattacgg tcgccgaagt catcatcctg gttaaactgg gccacatcag ttttaccgcc
     1141 atcgtaggag aaagatacgt ccgcggtcgg attgagtgta atgtcacgag cggtcgatcc
     1201 tgtttgatag cggaaataat cctccgcttc gaaatctccc accggaacag taccgttatt
     1261 tgccaaattt gtcagagcag aaccaattcc aagcgcctcg ttgagctcgt gggctgcaac
     1321 gtccatgaaa tcaaaatgcc cagaggtcgc aacttgatta tattcgaagt tcacattggc
     1381 atgagagctg aaggtaattg tgctgtcgaa ttgtggtgta aggttgccag cgataacctc
     1441 cccttggctg atgccaattg ctcttgcatc agcggttgta agtatcacat tgccgtcgcc
     1501 cagcggatcg ctgactggca aattggataa agcctcgttt tcgaaagtgt tctgtggatt
     1561 ggcggtagca ttggccttga ggtgatcgac ccagacagaa taagggaccg atacggtgtt
     1621 cgtactgctt gatccaagac ctgtgttgcc aaaacggaca tccagtttga ttgtaatcgg
     1681 gttactaaag gtattctcat aaagctggat cagattgttg aaggccgcct gcgccgcggc
     1741 gggcaccgac gcctcatacg tcggaacgat aattagccca gttggaacgc taacgtcgtc
     1801 gactggactg atggtcccgc tgattgtttg acccgccgac agtgtcgtcg ttgtcaacgt
     1861 gttctcaggt gtgaggtcgg ctgacacagc tcgcaatcct tgattgtacg gcgccttcga
     1921 ttgcaggctt ctgcggttgt gagagtggct gacggaacag gagaaaacct cgtcagcgtg
     1981 ttgcgtgaat tcacgactca aactcattcg cgtataaatt gcatttcaag tcaatagtca
     2041 agttcgtctc atcagcgcgt cgtgtcggcg gacgacttcg ttctcattca gaggagctct
     2101 accgcgcggg tcaaaattct tctgccaata tgaagggatt gggggcatcg acccgagtca
     2161 caaggcccga ggggcacgct cgtgcgggtg gcctccaaca tagcacgctg caggggcgcc
     2221 tcttgaggtc gcccggtttg cgcagggcat gctaggacct tcgtgctgat cgttccgccg
     2281 ggggagggcg accacaagtg gcgccctaca tcatccttta cgtgggcaaa gcgcggacta
     2341 ctcgtgcgtg gagccgtcgg gcatcagcgc gcccttgaaa tttacgccgt cgagcttagc
     2401 gtcagtcagg atcgcgcgcg acaaccgcga ctccgaaagg tcggcaccgg tgaggtcggc
     2461 gccggtgagg tcggcgccga acaggtcggc accagaaagg tttgcgcctt tcaggttggc
     2521 ctcgcgcatg accgcgtcga tgaggcccga atcctcaagg ttcgcaccct ccagattggc
     2581 gcggcgcaac gtcaccccga tgaggttggc gcgttgcagt tcggcgccct tgagcgcggc
     2641 atcgtcgagc cgtgcgccgg tcaggatcgc ctctgtgagc ttggcgttgt cgaggattgt
     2701 ccgcaccatc cgggccttgc ccatcttcgc ctcgacaagg attgcacccg tgaaattggc
     2761 gacactcaaa tcggcttcgt agaacattcc gttgggcacg ttggcgttgg cgaatgaagc
     2821 gttcttgaga tcagtcttgt tcaggttggc gccggcaagg tcggcgccag caaagtcggc
     2881 gccgaccagc cggctccggt gaaataccgc gcgggtgaga ttggcgccgg acaaatccac
     2941 cccagcaaga tcgcgtcgct tcagctgggc cttttcgagc acgcatttga cgcaagctct
     3001 ggttttgccg gcaaggaaat cgacttctcc gtccgcccgc gaaacggagg caccaaacgc
     3061 aatcaccaag gtaacagcga gcaccgcacg aggcagtagg caatccagca tggccttcaa
     3121 ttccgcttcg tcaaccaata tgatgacacg ttttcacgcg ccaccaaagc gggccgttcg
     3181 cccaagtgaa acaggccagg aagtccatca tgccgaacgt tgcaaggctg aacgcttcga
     3241 tgtgtcggtt tggtttcctc atcgccgccg cggtccttgc cggcgcgccg ggagtactgc
     3301 tcgcccaacg gaccgacgaa cggccggtca ggcgcgaagt gtgggatatc caactgggcg
     3361 ccaaggtcgc cgatctaccg gacgatttcg tcgactacgc ctgcggcacc aacggcggtc
     3421 cgccgtcgac gcccttaacc ggttggaagg attatcggcg ctgccggggt gacgtgaatg
     3481 ggctgcgcga ggtgtatttc cgctatgacg acgaacttga atattgggcc aaggccaaca
     3541 atctcactgc ccagatggag cagtatgtcg gcaccaagac ctacggtttt ccgatcaatg
     3601 tgtctgttct gatcggcgac gacgtggtgc gcggcatccg tatcgtcagc gacccgcgcg
     3661 acccgaccgg cgaccgcgag gaggcctatc tgctgcgcaa cttcctcagt gcgcggttcg
     3721 gccgtgaagg ctggctatgc gaggaccttg ccgccgaacc cggcgagacg ccagtcacgg
     3781 gtatcttcat caagcaacgc tgccagaagg atatggaggg cggcgtgcac ggcctaatgg
     3841 tgacgcgcca tctgcgcaag ccaggccaga gtcaattcga cccgcaatcc ggcaaggaaa
     3901 ccacgaacca gttcgagagc aatgtgcggt tcgaattgac caagatgaag taaacgatca
     3961 cctatttccc tacgaacgtt ttgataatgt agtccgtcac ggcttcgatc tcgcgttttg
     4021 tcagcggcgt cgaatgcgga tcgcggggcg cgtcagcgcc caaatccttg cccttcagcc
     4081 cgtagcaatc cgaatcctcg taggcgtatt tgtcgaagtg cggcatctcg gtggcaggcc
     4141 gcccgcaggc gatgacctct atcaactgga cgcggttgag cttggtctcg tgcagattgg
     4201 cggctcggcc gggcgagcgc ggatcgccgc gtccatcgcc gttcggaccg tggcagaatt
     4261 gacaatcggc cttgtcgtgg aacaagcggt cgccgaaaga gacgtcctgt gcggaggccg
     4321 gggagagttg aatggcggcg gccacggcgg ggacgatgaa tttgcagatg ttcacacaaa
     4381 actcctggct tccaagcaca ctcagtgaca atcatgc
//
LOCUS       DATILV010000111         2484 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4879999, whole genome shotgun sequence.
ACCESSION   DATILV010000111 DATILV010000000
VERSION     DATILV010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2484)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2484)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2484
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4879999"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            447..1031
                     /locus_tag="VLJ17_02430"
     CDS             447..1031
                     /locus_tag="VLJ17_02430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006468203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI/OmpD-associated family protein"
                     /protein_id="HSV21865.1"
                     /translation="MTEKRSGLPVLGFADQRSFERWLAAQPADAVGVWIKFAKKAATR
                     AKLTKTEAIDAALCHGWIDGKLEKYDNQHWLVRFTPRKSRSKWSALNRNRALTLIKEG
                     RMRPAGFAQIEAAKADGRWEGAYAPASRAEVPIDLQKALDNNPKASAFFATLNSRNRY
                     AILYRIGNVKKAETRARKITEFVAMLERGETIHG"
     gene            complement(1347..>2484)
                     /locus_tag="VLJ17_02435"
     CDS             complement(1347..>2484)
                     /locus_tag="VLJ17_02435"
                     /inference="COORDINATES: protein motif:HMM:NF013595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21866.1"
                     /translation="VLGLGAVVLVATQNIDTRAQPQTSNARSAMTGNAVTGEGLPNPA
                     PVVTRNWGELPAGRKWGTTAGIDVDPIDGNIWAYERCGAATAGGGPVDCDNTPVDPIF
                     KFDRKTGAVLANFGKGIMVTPHGIAVDMQGNVWIADFAGNQAGTKGHQVHKFSPKGEK
                     LMSLGVAGKASNADGEFNQPNDVVIGPDGSIYVSDGHEGQGMTTANAVADGIKRGATA
                     RISKFSPDGKFIKSWGGLGVRHGEFRTPHAMVFDGRGRLWVADRGNHRIEIFDQNGTY
                     LESRYMFGRISGLFIKGDTVYAIDSESGPYNHGNWRNGVRIGPVDEDRVTGFIPPFER
                     SDRVYQGAAGEGVAVDAEGNVYAAEGPNSFVQAGGAFTKYSVGR"
BASE COUNT          489 a          778 c          750 g          467 t
ORIGIN      
        1 tcacgactgt gaactcgtca gcgagtaaat cggcagttcg cgtgaaattg ccggcgtcgc
       61 cggtcgagcc ggcaattaag agcaacgccg gcccatttcc ctgcttctcg taataaagga
      121 gggtttggtt gacggcggcg aggtctgtga ccttttcgat agtcgccatg acggcatccg
      181 ttcgaagcta tcgcgaccgt accgcaattc atcgcaatcg agaagagaac gacttccgct
      241 gttggcacaa agccgacatg ccaatggcgt ttcgcgatgt ctgctttcgg gggtaaagcg
      301 gacatggcga tttcagagca ggatgtctgc ttttgaccca aagcggtcat ggaaccgttt
      361 agcggcggag acgacaattg cgcgtgtgga cctcagcacg gattcgggca gtatcggtcc
      421 cggtcgatag agaagcaggg ctctttatga cggaaaagcg atcaggcttg ccggttcttg
      481 gcttcgcgga tcaaaggtcg ttcgaaagat ggctcgcggc tcaaccagct gatgcggttg
      541 gcgtttggat taagttcgcc aagaaggcgg cgacaagagc gaaactgacg aaaacagaag
      601 cgattgacgc tgcgctctgt cacggatgga tcgatggaaa gctggaaaag tatgacaacc
      661 aacactggct tgttcgcttc acgccacgga aatcgcgcag caagtggtcg gcgctgaacc
      721 gcaacagagc gctgacgctc atcaaggagg gccgcatgag acctgcgggc ttcgcgcaaa
      781 tcgaagccgc taaggcagat ggtcggtggg agggcgccta cgccccggcg agtcgggccg
      841 aagtacccat cgacctccag aaggccctgg acaacaaccc gaaggcgtcc gcattctttg
      901 caacattgaa cagtcgaaat cgctacgcaa tcctgtaccg aatcggcaac gtcaaaaaag
      961 ccgagacgag ggcgcgcaag attacggaat tcgtagccat gctcgagcgt ggcgaaacaa
     1021 tccacgggta ggaaagatgc tgattatcgc gtgccgatcc cgacgagcca atcccacatg
     1081 atgcttttgc ggcaccgcac ttggtccggt tgtggcccga agcgacgccg tcgctcagaa
     1141 ccaaaagcgt caacaagccc gcgccccaca gtgtgggtcc cgccatcgct tccacccgct
     1201 ctcgtagagg ctcgtgcggc tgccgccagc ttttgcgcgc cgacttccgt catcatcgat
     1261 gcgcgcacca agcccctaac ctaagcaagc cgcctgcgaa tacggtgctg accggatctg
     1321 gatggcgcat ctacaccggc gttccgctac cgcccgacgg agtatttcgt gaacgcgccg
     1381 cccgcctgaa cgaacgagtt cggcccttcg gcggcgtaga cgttgccttc ggcatccacc
     1441 gccacgcctt caccagctgc accctgatac acccggtcgg agcgttcgaa cggcgggatg
     1501 aagccggtca cacgatcctc atcgaccggg ccgatccgga cgccgttacg ccagttgcca
     1561 tggttgtagg ggcccgactc cgagtcgatc gcatagaccg tatcgccctt gatgaagagg
     1621 ccactaatgc ggccgaacat atagcgcgac tctagatagg ttccgttctg atcgaaaatt
     1681 tcgatgcggt ggttgccgcg gtcggccacc cacaggcggc cgcggccgtc gaacaccatc
     1741 gcgtgcggcg tgcggaactc gccgtgccgc acgcccaagc cgccccatga cttgatgaac
     1801 ttgccatcgg gcgaaaactt gctgatccgc gccgtggcgc cgcgcttgat gccgtcggcg
     1861 accgcgttcg cggtggtcat gccctgccct tcgtgtccat ccgacacata gatgctgccg
     1921 tcggggccga tcacgacatc gttcggctgg ttgaactcac cgtcggcgtt gctggccttg
     1981 ccggcgacgc ccaggctcat cagcttctca cccttcgggc tgaacttgtg aacctgatgt
     2041 cccttggtgc ccgcctggtt gcccgcgaaa tcggcgatcc acacattgcc ctgcatgtcc
     2101 acagcgatgc cgtgcggcgt gaccatgatg cccttgccga agttcgcgag caccgcgccg
     2161 gtcttgcgat cgaacttgaa gatgggatcg actggcgtgt tgtcgcagtc gacgggacca
     2221 ccgccggccg ttgccgcgcc gcagcgctcg taggcccaga tgttgccgtc gatgggatcg
     2281 acgtcgatgc ccgcggtggt gccccacttg cggcccgccg gcagctcacc ccagttccgg
     2341 gtcacgaccg gagccgggtt cggcagtccc tctccggtga ctgcattccc cgtcatcgcg
     2401 ctccgcgcgt tcgacgtctg cggctgggcg cgggtgtcga tattctgcgt cgccacgaga
     2461 accacagcgc cgaggcccag aacg
//
LOCUS       DATILV010000112         3434 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1048244, whole genome shotgun sequence.
ACCESSION   DATILV010000112 DATILV010000000
VERSION     DATILV010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3434)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3434)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3434
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1048244"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(142..1581)
                     /locus_tag="VLJ17_02440"
     CDS             complement(142..1581)
                     /locus_tag="VLJ17_02440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21867.1"
                     /translation="MKITLSDDLSVDAVEYASRANAILGIRDSGKTYTATLLAEQLFI
                     AGVPSFAFDPIGRWRFLKTPNEKGGRGFPFVVAGGAKPDLDLTPESAPKLIRAAMAAG
                     VSMVIDLYSVHLSKADWRKIVRSSIETILYEGEGHGQRHVFLEEAAEFIPQKPYDGET
                     YAAIEKLARMGGNIGVGLTLVNQRAEEVNKAVLELCDNLLLHRQRGKNSLLSLRKWLD
                     AGNVDTSKEISKSLADLPTGECWAWFKDEGDPRRIHIARKQSFDPNRRTLATNKSGPT
                     PGAVDVSAFVEDMKAALAGKPVAATAPIKSQPKPKEEPDVKESEARALREENARLRDR
                     LGQLEATSSSPPAPPAATKSNATAATDMDAIYAEVKRRLLQEPSVLRVALVKPEIEIA
                     VKRHVVEMDGASQRGRFARLIASGFFDDGATNTAVRAEMKRTGGDMAPPTISKFFDEF
                     TTMGFLSRDGTTYTTVAGMKANVVEREAA"
     gene            complement(1581..2945)
                     /locus_tag="VLJ17_02445"
     CDS             complement(1581..2945)
                     /locus_tag="VLJ17_02445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21868.1"
                     /translation="MIDETEVREPEVRTAFNEARQAAELIPVGSGGVAVQNFAQQVDF
                     AKWLAKADFAIPKHLRGNVGACLAIAEIAGNTGLSSYGVANATYVQNDKLCFESKLVH
                     AIVERSGLLKGRLKVRYEGSGGDLTCYVYGTLKGDAEPSEWPLPGQAIPLKDLHPGYS
                     LAKREGNETSKKHMTYAEGEALKAAGLPQGAELHCKGSPLWSRKPHVQLFYDHCRDWA
                     RVYTPEALLGIFTGDEMDEYEGQIGPDRAKDVTPNDPGASLHERLKAAGRGEDGFREG
                     VVESGLNGHASNNTTQSSAPADVGAAVGTASVASLNSSQDNAPLSSPETKPAPSADAP
                     LLAGAGTTQSLGAPSVERKASSGEERQATESGHDAPQSDSAGLPELPEDWPRQYAAAL
                     NRAQKIGSLSKYAAEFWKAHGGWDAHKSGPHAATAIAIYDAFANNFADAEARNTILHE
                     LGAA"
     gene            complement(2942..3178)
                     /locus_tag="VLJ17_02450"
     CDS             complement(2942..3178)
                     /locus_tag="VLJ17_02450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21869.1"
                     /translation="MYPTLEQVDAADRYQLCSWWRFLPSPGSRVLSRPNYKQEDFNRA
                     LEAEAKIMDRISARMNEVGGMTPEISKSLGWGNQ"
     gene            complement(3181..>3434)
                     /locus_tag="VLJ17_02455"
     CDS             complement(3181..>3434)
                     /locus_tag="VLJ17_02455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21870.1"
                     /translation="GRPRYKIPPHTDIINVVVNGNQRHNQMVAYALVQVAFGYDGKPK
                     GQLGMPRQFAIIGSKIEFWPIPDKAYQVKVRYTPPIQEF"
BASE COUNT          606 a         1054 c         1027 g          747 t
ORIGIN      
        1 ggccatcggc ccggacattc accgcgaagc tatcggtgac gttccctgcg tcattgcata
       61 gcgcagcggc catcctaacg caccacacgg atttggtggc gccagggagg ccgcttgtgg
      121 cgatgctgac gtgcaggacg gtcatgctgc ctcgcgctcg acaacattgg ccttcatgcc
      181 agcgacggtg gtgtaggtcg ttccgtcgcg gctcaggaac cccatcgtag tgaactcatc
      241 aaaaaacttg gaaatggtag gcggagccat gtcgccgccc gttcgcttca tctccgcgcg
      301 gacggccgtg ttcgtcgcgc cgtcatcaaa gaacccactc gcgattagcc gagcgaaccg
      361 cccgcgttgc gatgcgccat ccatttcaac gacgtgccgt ttcacggcaa tttcgatctc
      421 aggcttcacc agggcgaccc gcagaacgga tggctcttgc agcagacgac gcttcacctc
      481 ggcatagatc gcgtccatgt ctgtggccgc ggtcgcgttg ctcttggttg ccgcaggggg
      541 cgcgggtggt gaacttgatg ttgcttcgag ctgaccaagg cgatccctca gccgtgcatt
      601 ttcttcgcgc aacgcgcggg cttcggactc cttcacgtca ggctcctctt ttggtttcgg
      661 ctgtgactta attggggcgg tcgccgcgac gggtttcccc gcgagcgcgg ccttcatgtc
      721 ttcgacgaaa gcagacacat cgacggcgcc cggcgtggga ccgctcttgt tggttgccag
      781 cgtgcgtcgg ttcggatcga acgactgctt gcgggcgatg tgaatgcggc gcgggtcgcc
      841 ttcatccttg aaccatgccc agcattcgcc cgtgggcaga tcggcgaggc tcttggaaat
      901 ctctttcgag gtatcgacgt tgccagcgtc cagccatttg cggagcgaga ggagcgaatt
      961 cttgccgcgc tgccggtgca ggagcagatt gtcgcaaagc tccagaaccg ctttgttcac
     1021 ttcctcggcg cgctgattca ccaacgtcag gccaacgccg atattgccgc ccatgcgcgc
     1081 gagcttttcg atggcggcgt aggtctcgcc gtcatagggc ttctgaggga tgaattcggc
     1141 ggcctcctca agaaagacgt gccgctgccc gtggccttcg ccctcgtaaa ggatcgtctc
     1201 gattgaggaa cggacaatct tgcgccagtc ggccttggac aggtgaaccg agtacaggtc
     1261 gatcaccatt gacacgccag ccgccatcgc agcgcggatc agcttcggag ccgattccgg
     1321 cgtcaggtcc aagtcgggct tggctccgcc agccacaaca aacgggaagc ctcgtccgcc
     1381 cttttcattc ggcgttttca ggaaccgcca gcggccaatg ggatcgaagg caaaggatgg
     1441 caccccagcg atgaatagct gttcggccag cagagtcgcc gtgtacgtct tgccgctgtc
     1501 tcgaatgcct aaaatggcat tcgcacggct ggcatactcc accgcatcaa cagatagatc
     1561 gtcgctgagc gtgatcttca ttatgcggcg cccagttcat gcaagatcgt gttccgcgct
     1621 tccgcatcgg cgaaattgtt ggcgaatgcg tcatagatcg cgattgccgt tgcggcgtgc
     1681 gggccggact tgtgggcatc ccaaccaccg tgcgctttcc agaactccgc cgcgtatttc
     1741 gacaaagagc cgattttctg agcgcgatta agcgccgccg cgtactggcg cggccaatcc
     1801 tccggtaatt caggcaggcc agcggaatca ctctgtgggg cgtcatgccc ggactccgtg
     1861 gcctgccgtt cctcgccaga tgaagccttc cgttcgacgg agggtgcacc tagcgattga
     1921 gttgtgcccg cgccggccaa caggggggcg tcagcgctcg gcgcgggctt cgtctcaggt
     1981 gaggatagag gggcgttgtc ctgagacgaa ttaagtgagg cgacggacgc agtacctacc
     2041 gccgccccga catcggccgg agccgatgat tgtgtggtgt tgttcgacgc gtggccgttc
     2101 agcccgctct caacgacacc ctcgcggaat ccatcttcgc ctcggccggc ggccttgagc
     2161 cgttcatgca gagatgcgcc gggatcgttg ggcgtgacgt ccttggcccg atctggcccg
     2221 atctggccct cgtattcgtc catctcgtcc ccggtaaaga tgcccagcaa tgcctcgggg
     2281 gtgtagaccc gcgcccaatc ccggcagtgg tcatagaaaa gctgaacgtg aggtttccgg
     2341 gaccaaaggg gcgatccctt gcagtgcagt tcggccccct gcggtagccc agccgccttc
     2401 aacgcctcgc cctcggcgta ggtcatgtgt tttttgctgg tctcgttgcc ctcgcgcttg
     2461 gcaagagagt agccggggtg aaggtctttc agtgggatgg cttggcctgg cagcggccac
     2521 tcgctcggct cggcgtcgcc cttcagggtg ccgtacacgt agcaagtcaa gtcgccgcct
     2581 gatccttcgt accggacctt caggcgcccc ttcaacagac cgctgcgctc cacaatcgca
     2641 tgaaccagtt tggactcgaa acacagtttg tcgttctgga cataggtcgc attggcgaca
     2701 ccataggatg atagcccggt attgccggct atctcggcta tggccaagca cgcgccgaca
     2761 ttccctctca ggtgttttgg gatggcgaag tcggcttttg ccagccactt cgcaaaatcg
     2821 acctgttggg cgaagttctg aacggcaacg ccacccgaac caactggaat caactcagcc
     2881 gcctgccgcg cctcgttgaa tgccgtgcga acctctggct cgcggacttc ggtttcgtcg
     2941 atcattggtt gccccatccc agcgacttgc tgatttccgg cgtcatgccg ccgacctcgt
     3001 tcatgcgcgc cgaaatgcgg tccatgatct tggcttccgc ctcaagcgcg cggttgaaat
     3061 cttcctgctt gtagttgggg cgcgacagaa cgcggcttcc gggtgacggc agaaagcgcc
     3121 accacgagca caattgatag cgatcggcag catcaacctg ttcgagcgtc ggatacatct
     3181 tcaaaattcc tgtattggag gcgtgtagcg gactttcact tggtacgctt tgtcggggat
     3241 gggccagaac tcaatcttgc tgccgatgat ggcaaactgc cgtggcatgc ccaactgtcc
     3301 cttcggtttt ccgtcatatc cgaatgcgac ttgcaccaag gcatacgcca ccatttgatt
     3361 gtgccgttga ttgccgttca ccacgacgtt gataatgtcg gtgtgcggcg ggattttgta
     3421 tcgtggacga cctt
//
LOCUS       DATILV010000113         2283 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2581595, whole genome shotgun sequence.
ACCESSION   DATILV010000113 DATILV010000000
VERSION     DATILV010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2283)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2283)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2283
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2581595"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..146
                     /locus_tag="VLJ17_02460"
     CDS             <1..146
                     /locus_tag="VLJ17_02460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009026869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HSV21871.1"
                     /translation="MQAVAFLNGTKKPTDQQIDEAMAGNICRCGTYQRIRAAIKTAAE
                     GKV"
     gene            143..>2283
                     /locus_tag="VLJ17_02465"
     CDS             143..>2283
                     /locus_tag="VLJ17_02465"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSV21872.1"
                     /translation="MNAIENVSRRSFLKGLVSAGALVLGAHYYPKLVSAQGLPKDTDA
                     DRATLHPNVFVGINTDGTVWIVAHRSEMGTAIRTSLPLVVADELDADWKRVKIDQAIG
                     DPRYGDQNTDGSHSIRSFYDVMRQAGATARFMLIQAAAQKWNVAPGECVTELHVVVHR
                     PTGRRLGYGELAASAAKLPVPKQEQLQLKSKNSWRYIGKGMPSYDLEQLCNGKAVYGM
                     DAHVDGMVYASIEHPPVIGGKVKSYDDKEALKVTGVRQTISIDPFKPPPAFQPLGGIA
                     VIADNTWAAFQGRKKLNIVWDNGPNETYDSAQYKKELQDTARKPAKVVRSEGDVDAAF
                     AKGGKIMEAEYYVPLLAHASMEPMVALADFRDGRATIWAPTQNPQAAQDIVSKELGIA
                     KENVICHVTLLGGGFGRKSKPDYVAEAAVLSKKVGRPVKLVWTREDDVKFDYYNAVAA
                     MYMKATLDANGKPTAWLQRSVFPPITSIFDVNAVYGDPSHLQQGWTDIPFDIANLRVE
                     NGAAKAHVRIGWLRSVANIYHAFAVQSFADELAHAAGRDPLDYLLDLIGKPRTIDFKN
                     VDYPNYGASLETYPWETGRLRRVTEMVAEKAGWGKRKLGKGAGLGIAAHKSFLTYVAT
                     IVEVEVNDQGEIKIPRVDTVVDAGLVVNPEITRAQFEGAAVFGTSVAKTGEITATKGA
                     INQSNFSDYPVARIDEAPLQTNVYLVDSSAPP"
BASE COUNT          520 a          639 c          687 g          437 t
ORIGIN      
        1 tcatgcaggc ggtggctttc ttgaatggca caaagaaacc caccgatcag cagatcgatg
       61 aagcgatggc cgggaatatc tgccgctgtg gaacctacca gcgaattcgc gcggcgatca
      121 aaacggcagc ggagggaaaa gtatgaacgc gattgagaat gtcagccggc gcagtttcct
      181 caagggactt gtctcagcgg gagcactcgt gctcggcgcg cactattacc cgaaacttgt
      241 ctcggcccaa ggcttgccga aagatacgga cgccgatcgc gcgaccctgc atcccaacgt
      301 gtttgtcggg atcaatacag acggcaccgt gtggattgtc gctcatcgct cagagatggg
      361 taccgcgatt cgcacttctc tgccgctagt ggttgccgat gagttggacg ccgactggaa
      421 gcgagtgaag atcgaccagg cgatcggcga tccacgttac ggcgatcaga acaccgatgg
      481 atcccattcg atcagaagct tttatgatgt catgcgacag gccggcgcga ccgcgcggtt
      541 catgctcatt caggcagccg cgcagaaatg gaacgttgca ccgggggagt gcgtgactga
      601 gctccacgtc gtggtgcatc ggccgactgg ccggcgcttg ggctacggcg agcttgccgc
      661 cagcgctgcg aaactgccgg ttcccaaaca ggaacaattg cagctcaagt cgaagaactc
      721 atggcgctat atcggcaagg gtatgcccag ctacgatctg gagcagttgt gcaacgggaa
      781 agctgtctat ggcatggacg cccacgtaga cggcatggtc tacgcctcca tcgagcatcc
      841 gcccgttatc ggcggcaaag tgaaatccta cgacgataaa gaggcgttga aagtaaccgg
      901 agttcgtcaa acgatttcca tcgatccgtt caagccgcct cccgccttcc agccgctggg
      961 tggcatcgcg gtgatcgcgg ataacacttg ggcagcattt cagggtcgca agaaactgaa
     1021 tatcgtctgg gacaacgggc cgaacgaaac ctacgattcc gcgcaataca agaaggagct
     1081 gcaggatacc gcccgcaaac cggcgaaggt cgttcgcagc gaaggcgatg tggacgctgc
     1141 ttttgccaaa ggcggcaaga ttatggaagc cgagtattac gtcccgctcc tggcccatgc
     1201 ttccatggaa ccgatggtag cactggcgga ttttcgcgac ggcagagcga cgatctgggc
     1261 gccgacgcaa aatcctcaag ccgcgcaaga tatcgtgtcg aaggagttag gcatcgccaa
     1321 ggagaacgtc atctgtcacg tcaccttgct cggcggcggc tttggccgca aatccaaacc
     1381 cgactacgtc gccgaggcgg cggtgctgtc caaaaaagtc ggccgcccgg tgaaactggt
     1441 ctggacgcgc gaagatgacg tgaagttcga ctactacaac gcggtggcgg cgatgtacat
     1501 gaaagcgacg ctggacgcga atggcaagcc gaccgcgtgg ctccagcgct cggtctttcc
     1561 gccgatcact tcgatcttcg atgtcaatgc cgtgtacggc gacccgagtc atctgcaaca
     1621 aggttggacc gatattccct tcgacattgc caatctgcgt gtcgagaacg gcgcggccaa
     1681 agcccacgtg cgcatcggtt ggctgcgctc ggtggcgaat atttatcatg ccttcgccgt
     1741 gcaatcattc gccgatgagc tcgcgcatgc agcaggacgc gatcccctcg attatttact
     1801 cgacctgatt ggcaaaccgc gcacgatcga tttcaaaaat gtagattacc cgaattatgg
     1861 cgcttcgctc gaaacctatc catgggaaac cggtcgtctg cggcgggtga ccgagatggt
     1921 cgcggagaaa gccggctggg gaaaacgcaa gctcggcaaa ggcgcgggat taggtatcgc
     1981 ggcgcataag agttttttga cttatgtcgc gacgatcgtc gaagtcgagg tgaacgatca
     2041 aggcgagatc aagattccgc gcgtcgatac tgtcgtggat gccggcttgg tcgttaatcc
     2101 ggaaatcacc cgcgcgcaat tcgagggcgc cgcggtgttc ggcacgagcg tggcaaaaac
     2161 gggcgagatc acggcaacca aaggcgccat caaccaatcc aatttttccg attatccggt
     2221 tgcccggatc gatgaggcgc cgttgcagac gaatgtgtat ctcgtcgaca gcagcgcgcc
     2281 gcc
//
LOCUS       DATILV010000114         7090 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2070977, whole genome shotgun sequence.
ACCESSION   DATILV010000114 DATILV010000000
VERSION     DATILV010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7090
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2070977"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..791)
                     /locus_tag="VLJ17_02470"
     CDS             complement(<1..791)
                     /locus_tag="VLJ17_02470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="heme peroxidase"
                     /protein_id="HSV21873.1"
                     /translation="MAVQFIRSDLEFILAQIEIAERNAAGESLLDILPNVEVPYGLRT
                     VDGTLNNIVPTQTEFGAADNTFPRLTDPVFRPADPVAFDPDGPGGQAVGDPTSYAQTS
                     GVVFDSQPRTISNLIVDQTANNPAAYATAFDPGPDGILHTADDFLKDGVQIVTSPGLD
                     GLFGTTDDRDVFFFPNVSPDVGLSAPFNPWFTFFGQFFDHGLDLVTKGGNGFVFIPLQ
                     ADDPLIAGADGIFGTADDLPAQQRFMVETRATMLPGPDGILGTAD"
     gene            1129..1521
                     /locus_tag="VLJ17_02475"
     CDS             1129..1521
                     /locus_tag="VLJ17_02475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019998693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSV21874.1"
                     /translation="MYTQHGRGCELNQERRNQAGIWLRKLRKSRGLSQQKLAALVGAE
                     YYTFISQLETGRGRIPPDRYLIWARALEIDKREFVRTLMSYYDPVTYGILFDQAPEVE
                     QADMNTRGLPRAIPGGDSGTEKMQASHI"
     gene            2271..2948
                     /locus_tag="VLJ17_02480"
                     /pseudo
     CDS             2271..2948
                     /locus_tag="VLJ17_02480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008878139.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            3177..4673
                     /locus_tag="VLJ17_02485"
     CDS             3177..4673
                     /locus_tag="VLJ17_02485"
                     /EC_number="3.2.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012042867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008714 - AMP nucleosidase activity
                     [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA];
                     GO_process: GO:0044209 - AMP salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AMP nucleosidase"
                     /protein_id="HSV21875.1"
                     /translation="MPAALSVRTPRRIATEPFTDAGAAVARLEEIYERNAHFLRDCFE
                     AYANGEPLTTRVRATYPFVRVTTSTHARLDSRLSYGFIARPGAHETTVTRPDLFRGYL
                     TEQIRLLIENHSVPVEIGESSEPIPVHFSYRRDVNIGAVLSGGAKSMLDQPLRDVFDT
                     PDLAAMDDAIANGTLQLPPGSPEPLALFRAARIDYSLHRLYHYTGTDPEHFQNFVIFT
                     NYQFYVDAFARLCQERVGSGQPGFEAFVAPGNVIMRNARLGGAKVGVGPERMPQMPAY
                     HLVEPGYRGITLINIGTGPSNARTITDHVAVLRPHAWLMLGHCAGLSDTQKLGDYVLA
                     HGYVREDHVLDQELPLWAPIPALAEMQVALEQAVSEITGLGGFELKRVMRTGTIASVD
                     NRNWEIGDPAIIRRLSQSRAIALDMESAAIAANGFRFRVPYGTLLCVSDKPLHGEIKL
                     AGMADEFYRQRVGQHLEIGLTALEKLKSQEWERLHSRKLRSFAEVAFQ"
     gene            complement(5076..5405)
                     /locus_tag="VLJ17_02490"
     CDS             complement(5076..5405)
                     /locus_tag="VLJ17_02490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21876.1"
                     /translation="MHASHSNRHSNRSFRFATNTSFDGISVEEQTAVVLPACGFHVDT
                     EARFPREAMEVAEHADAEERSSPRAALACCDVGLEADFDSDGADAIHAVEEASRSAAK
                     NLFNPLI"
     gene            complement(5563..5916)
                     /locus_tag="VLJ17_02495"
     CDS             complement(5563..5916)
                     /locus_tag="VLJ17_02495"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSV21877.1"
                     /translation="MRQKAASPQGASGAFRRAAAGAVALALFAALHATLAAEPDLIEQ
                     GRDLYADTCATCHGRDMVIFGGLAFDLRKFPKDDFARFRDSVLNGKNEVMPAWRDKIT
                     DEDLAALWAYVRSGG"
     gene            complement(5924..>7090)
                     /locus_tag="VLJ17_02500"
     CDS             complement(5924..>7090)
                     /locus_tag="VLJ17_02500"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSV21878.1"
                     /translation="VDEAAKLLVEARMPLMIVGDEIYKVKAAGKAVRLAELLGMPVTQ
                     VRQLYANFPETHPLWVGNTPTANLASLTFPRNPDVVINVGNKFQHNGAAPIVPRGPKF
                     IDMRIDFASMGNVMLTEVPLVADVALGLDDLFAAVEQLMTPALKAKATERAAEVKKFA
                     EQARALRALVINNPEWDHSPLIADRVTYEIAKFADPDAIIVNEAGSVAMHSFDFDPNG
                     GRELFFYYGSHLGSGVGTAAGVKLARPNQQVICLVGDGSFIFGPTALWNMARLELPVI
                     VVVYNNHAYSGPHSRVIANVPSGRMVQTGQYVHDYLGNPDMNMADIARGFGVKGEVVE
                     SPAQLREALARARAHTVEGRPYLIDVQVARRGVGWADKPWVPPIRVAEIRQKRG"
BASE COUNT         1491 a         2114 c         2088 g         1397 t
ORIGIN      
        1 tcgtcggcgg tgccgaggat gccgtcgggg ccgggcagca tggtggcccg cgtctcgacc
       61 atgaaccgct gttgcgcggg caaatcatcg gcggttccga agataccgtc agcccccgca
      121 atgagcggat cgtcagcctg cagcggaata aagacgaacc cattgccccc cttggtgacg
      181 agatcgagac cgtgatcgaa gaactggccg aagaacgtga accacggatt gaacggcgcc
      241 gacaagccga cgtctggcga cacgttcggg aagaagaaaa catctcgatc gtcggtggtg
      301 ccaaataggc cgtccaggcc agggctggtg acgatctgga cgccgtcttt gaggaaatcg
      361 tcggcggtgt ggagaatgcc gtccgggcct ggatcgaacg ccgttgcgta ggctgccgga
      421 ttgttggcag tctggtcgac gatcaaatta ctgattgtgc gcggctgcga atcaaacaca
      481 acgccgctgg tttgtgcata ggaggtcgga tcaccaacgg cctgcccgcc ggggccatcg
      541 ggatcgaatg caacgggatc cgccgggcgg aacaccggat cggtcagtcg cggaaaggtg
      601 ttgtcggcgg cgccgaactc ggtctgagtc ggtacgatat tgttgagtgt gccgtcgacc
      661 gtccgcaggc catacggcac ctcgacgttt ggtagtatgt cgaggaggct ttcaccggca
      721 gcattccgtt ctgcgatctc gatctgagca aggatgaact cgaggtctga acggatgaat
      781 tgaacggcca tgatgtgcct ccttcttccc cccggcgcga ctgcgcgccg atgtcacata
      841 cagcaaacat aataccactt aaattttttg tatagtaaat atctattcgt tgcgtcaacg
      901 tgcccagtag tatggaaaaa tgcatacaaa aaagggggac gttacccagg aaactgcccc
      961 caaaaagggg gatactaccc aggaaactgt cctcaaaagg gggcactacc taggaaactg
     1021 ccctctcata aggaagcgtt ccatctctga aaatgtatgg cgccgagtgc tgaagacgtg
     1081 gagcaaatct ttcgtgagag caccatcgac aagtgagata ggttgaaaat gtacactcag
     1141 catggacgag gctgtgagct taaccaggag cggcgcaatc aggcggggat atggctgcgc
     1201 aaattgcgaa agagccgtgg cttatctcag cagaagttgg ctgctctggt gggcgcggag
     1261 tactacacat tcatttccca gcttgagact gggcgaggtc gtattcctcc tgatcgttat
     1321 ctgatttggg cgcgcgccct cgaaatcgac aagcgcgagt tcgtccgcac cctcatgtcc
     1381 tattacgatc ctgtgacata cggcatcctc tttgaccaag caccggaggt cgaacaagcg
     1441 gacatgaaca ccagaggctt acctagggct attcctgggg gcgacagcgg gactgagaaa
     1501 atgcaagcca gtcatatata aacgagatac tgcaggcgac tctttgcatc gtcatcatca
     1561 taaggaacgt ctgtagacta cgtcgactgg ccagcttgtt ctcgacattg cgtggcgtat
     1621 cggcctcgct gtggcatggg ccaaatggtg cttcggcacg gcgataatcg tgccaaacgt
     1681 taggttgtga agtttttcaa cggagccagg ctgggtcctt gatgattttc gacgatgacg
     1741 ctccgtagat ctgcgataac tccacccccg tagatctacg atgatcttcc cgttagatcc
     1801 aacgcgcgac gtcgcctgcc cgtgccatgt ggtcgcgggc agcgattgtt tataatggct
     1861 tttcggacaa aataaatgtg ccgccctcgc ataggtttcg catggataat caatattggc
     1921 ttgcataaat aaggttgtgg agtgataaaa gttagccgtt ggattgaaat tgtagcctcg
     1981 gtcagcaata gtgcgagcct acgctgatat gatgtttacg gtagagacgc tatcgatatt
     2041 aaaattattt tgtaagcggt cgggtggctt ggacgaacat tacgcaccta ccacgaagaa
     2101 cgaagaacga aagcgacaca tggcataggc ggacgcaaac accaaacgca aacgcctcga
     2161 atcacagctt ggcgagctca accggaaaat cgaccggctg cttgacgcga aggctacgct
     2221 ttgggcccgc gagtgcatgg cgggccgggt cccgatgcca aacggccgcc cttggccgcg
     2281 tcatccgcga catcacccgc aagatcgcag gcgatgactg gctgcaaacc aagttcgcct
     2341 ggctgctcaa cctcgcccgc agaatgcgtg agcaggagcg cggccagcgc ggcccgaagg
     2401 tctacagcct gcacgccccc gaggtcgaat gcatcggcaa aggtaagccg cacaagccct
     2461 atgagttcgg cgtcaaggtg cgcgtcgcca ccacgctcaa gcgctgcaag ggcgggcagt
     2521 tcgccatccg tgcaaaggcg ctgccgagca atccttatga cggccacacc ctggcgaaga
     2581 tcattccggc catcgaacaa ctcatcggca acgagatcga gcggctccat gctgatgccg
     2641 gctatcgcgg ccacaacgcg ccgcccaact accggttcaa agtctacacc tcaaagcaga
     2701 agcgccgcct caccccgcag atcaagcgcg agatgcggtg ccgctccgcc gtcgagccag
     2761 taattggcca catcaagaac gaacatcgca tgggccgcaa ctaccttcac catcgccacg
     2821 gtgatgccaa caacgccatt ctcgccgccg tcggctacaa cttcagcctc ctcatcaagt
     2881 ggctgaggat tttattgtgc ctcgtcatgg tcgcgatctt ggccccgcca aaatccgcca
     2941 cagcgtgaaa gacggttctt cacggacgac tgatttactt caggctgggc tgattggggc
     3001 tccggcccca atcagaaatg caccaaaatt gcgtcacagc cccgattacc taccgattga
     3061 caagtgcact cctatggtcg tgctagaggt tggcgcctcc attcctattg tatatatagc
     3121 acctccacca agcctgcccg cgttcgttgc ttccacagaa ccgaactttc cacgacatgc
     3181 ccgccgcact gagcgttcga accccccggc gcatcgcgac cgagcccttc actgatgctg
     3241 gtgctgcggt agcccgcctt gaggagatct acgagcgcaa tgcccacttc ctgcgtgatt
     3301 gctttgaggc atatgccaac ggcgagccgc tcacaacgcg cgtacgcgcc acctacccat
     3361 ttgtgcgcgt caccacttcg acgcatgcgc ggctcgattc acgcctctcc tacggcttca
     3421 tcgcccgacc aggcgcgcac gagacgaccg tgacgcggcc agaccttttc cgtggctatc
     3481 tcacggagca gatcaggctg ctgattgaaa accacagcgt cccggtcgaa atcggcgagt
     3541 cgagtgagcc catcccggtt catttctcct atcgccgcga cgtcaatatc ggagcggtgc
     3601 tctccggtgg cgcaaagtcg atgctcgacc aaccgctgcg cgacgtgttc gacacgccag
     3661 acctcgccgc catggatgat gcgatcgcca acggcacgct gcagctgccg cctggctcac
     3721 cggagccgct ggcattattc cgcgcggcgc gcatcgacta ttcgctacac cggctttatc
     3781 actacaccgg caccgatccg gagcacttcc agaacttcgt gatcttcacg aattatcagt
     3841 tctacgtcga cgcatttgcg cggctgtgcc aggaacgcgt gggctcgggc caacccggct
     3901 tcgaggcctt cgtcgcccct ggcaatgtaa tcatgcgcaa cgctcggctt ggcggagcca
     3961 aagtcggagt tggcccagag cgcatgccgc agatgccggc ctatcatctc gtcgaacccg
     4021 gctatcgggg aatcacgttg atcaacatcg gcaccggccc gtccaacgcc cgcaccatca
     4081 ccgaccatgt tgccgtactg cggccgcatg cctggttgat gctggggcac tgtgcgggcc
     4141 tcagtgacac gcagaagctc ggcgattacg tcctcgctca cggttatgtg cgggaggacc
     4201 atgtgctcga ccaggaactg ccgctgtggg cgccgatacc agcgttagcc gagatgcaag
     4261 tagcgcttga gcaagcagtc agcgagatca ccgggctcgg ggggttcgag ttaaagcgtg
     4321 tgatgcgcac cgggaccatc gcgagcgtag acaatcgcaa ttgggagatt ggcgaccccg
     4381 ccatcattcg acgcctgtca cagtcgcgag ctattgcact cgacatggag tcggcagcaa
     4441 tcgccgccaa cggctttcgc ttccgcgtgc cctacggcac attactttgc gtgtcggata
     4501 aaccgctcca tggagaaatc aagctcgccg gtatggctga cgaattctac cggcagcgtg
     4561 tcggccagca tcttgagatc ggtttgacgg cgctagaaaa gctcaaatcc caggaatggg
     4621 agcgcctgca ttcgcggaaa ctgcgaagct ttgccgaggt tgcattccag taacatttga
     4681 actcgcgcgc ggcccgagcg gctgttagga gcaggggcgc agctctaagc tgcgccgctc
     4741 aatgcggcga agcattaaag cgcatcataa tcatctcttg atctatttat atagatcaac
     4801 ggaacagctt tcggtgtcag cccccggaag ctctcctcta ccgcgatcag gcccacgccg
     4861 acacagagcg gctcgctggt gcgttggaac ggcttgggcc gagtatccgg caggctctca
     4921 agacatttgc cagcaactga gaaagggtct ctggcccctg tcagcatccg ctgccgggcg
     4981 gcgttctttt gaggatgagc ctgttgggcg ttgcccgaca gcaatgaacg ctgaggcgat
     5041 cttgcgagcc gcatggactc gcgtcagcgg ctgtttcaaa tcaagggatt gaagagattt
     5101 ttggcggccg aacgagaagc ctcctcaacg gcatggattg catcagcgcc gtcgctatcg
     5161 aaatccgctt ccagcccaac gtcgcagcag gcgagcgcgg cgcgaggtga actgcgctcc
     5221 tcggcgtccg cgtgctcagc gacctccatc gcttcccgcg ggaatctggc ctcggtgtct
     5281 acgtgaaacc cgcaagccgg caagaccacg gctgtctgtt cctcaacgga aatgccatcg
     5341 aatgacgtat tggttgcaaa gcggaaagaa cgattggaat ggcgattaga gtgcgatgca
     5401 tgcaattctt ccaccgattt tagtgaggtg agggacgtgg cagctcgggt ccgattttcg
     5461 cgatcgacga ggctcgacgg cagcgtgagg cgagagtgtg acggacttct gcagcggcgc
     5521 ctgcgatggc gggagcgcta aatatctaat agtcccgagc ggtcacccac cgctgcgcac
     5581 ataggcccaa agggccgcaa ggtcctcgtc ggtgatcttg tcgcgccatg ccggcatcac
     5641 ttcatttttg ccgttgagca cggaatcgcg aaagcgcgcg aaatcgtcct tggggaattt
     5701 gcgcaggtcg aacgccagtc ctccgaaaat caccatgtcg cgaccgtgac aggtcgcgca
     5761 ggtgtcggca tagagatcgc ggccttgctc gatgagatcg ggttcggcag caagggttgc
     5821 gtgcagcgcg gcgaagagtg cgagagcgac ggcaccagcc gccgcccttc gaaatgcgcc
     5881 gcttgcgccc tgaggcgatg cagctttctg cctcacgtgg tcctcacccc cgcttctgcc
     5941 ggatttcagc gacacggatc ggcggcaccc acggcttgtc ggcccagccg acgccgcggc
     6001 gggcgacttg cacatcgatg agatagggcc taccctcaac ggtgtgtgca cgggcgcgcg
     6061 ccagcgcctc gcgaagttgc gctgggctct ccacgacctc gcccttgacc ccgaaaccgc
     6121 gggcgatatc ggccatgttc atgtcgggat tgcccaggta gtcgtgcacg tactgccctg
     6181 tctgtaccat acggccgctc ggcacgttgg cgatcacgcg gctgtgcggt cccgaatagg
     6241 catggttgtt gtagacgacg acgatcaccg gcagctcgag ccgtgccatg ttccacagcg
     6301 cagtcggacc gaagatgaag gagccgtcac cgaccagaca gatgacctgc tggttcggcc
     6361 gcgccagctt gacgcccgcc gctgtgccga ccccggagcc aaggtgggag ccgtaataga
     6421 aaaacagctc acgtccgccg ttcgggtcga aatcgaaact gtgcatcgcc accgagccgg
     6481 cctcgttgac gatgatggcg tcgggatcgg caaactttgc gatttcgtag gtgacacgat
     6541 cggcgatcag cgggctatga tcccattccg gattgttgat gacgagcgcc cgcaaggccc
     6601 gcgcctgctc ggcgaatttc ttcacttccg cggcgcgctc tgttgccttg gccttgagtg
     6661 cgggcgtcat cagctgctcg acggccgcga agagatcgtc gaggcccaga gctacatcgg
     6721 cgaccagcgg cacttcggtg agcatcacat tgcccatgct ggcaaagtcg atgcgcatgt
     6781 cgatgaactt cggcccgcgc ggcacgatcg gcgccgcacc gttgtgctgg aacttgttgc
     6841 cgacgttgat gaccacgtca ggatttctcg gaaatgtcag cgaggcgaga ttggcggtgg
     6901 gtgtattgcc gacccacagc ggatgggtct cggggaaatt ggcgtagagc tggcgcacct
     6961 gcgtgaccgg catgcccaag agctcggcga gccttacggc cttgcctgcc gcctttacct
     7021 tgtagatttc gtcgccgacg atcatgagcg gcatccgggc ttccaccagg agcttggcgg
     7081 cctcatcgac
//
LOCUS       DATILV010000115         2528 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1560491, whole genome shotgun sequence.
ACCESSION   DATILV010000115 DATILV010000000
VERSION     DATILV010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2528
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1560491"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..274
                     /locus_tag="VLJ17_02505"
     CDS             <1..274
                     /locus_tag="VLJ17_02505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21879.1"
                     /translation="WQSYGGPAREAIARWSPLLGWLAPPAAPVAQTASTVSASAPPDQ
                     LKATSLALAAVRQSVDKLATEISKLQVQGPDRTSASPHSRSGSRRP"
     gene            complement(806..1057)
                     /locus_tag="VLJ17_02510"
     CDS             complement(806..1057)
                     /locus_tag="VLJ17_02510"
                     /inference="COORDINATES: protein motif:HMM:NF023494.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3551 domain-containing protein"
                     /protein_id="HSV21880.1"
                     /translation="MRTPIIMLFVIAAALLGATQVSNAQSPYSYPWCALGGPKNSNAL
                     SCYYTSWQQCMTTLSGIGGLCVESPYYHAQLNSRRTARR"
     gene            complement(2225..>2528)
                     /locus_tag="VLJ17_02515"
     CDS             complement(2225..>2528)
                     /locus_tag="VLJ17_02515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21881.1"
                     /translation="DDTCAVIAGPGGHSYAEFLANCEECSAVEGIYIAWAQGFMAALN
                     IERTLRGAPAKNVFVHTDFEQAALIRQLHEWRHPEGYYLAVAAYFKSLPDGVALTH"
BASE COUNT          487 a          755 c          759 g          527 t
ORIGIN      
        1 ttggcagtcc tacggcggcc cagccagaga ggcaatcgcg agatggtctc cactgcttgg
       61 ctggttggca ccgccggcag ccccggttgc gcagaccgct tcaaccgtgt ccgctagtgc
      121 tcctcctgat cagctcaaag cgacctcgct cgctcttgcc gcggtacggc aaagcgtcga
      181 caagctcgcc accgagatta gcaagctgca ggtgcagggt cctgacagga cctcagcgtc
      241 tcctcattcg cggtcggggt cccggcgccc ctgacgcgct gtcgccccaa gccgctaaaa
      301 tggctgccgg ccgggttggt gaaggcaaga tccgccacca ggcgttcgcc tctgagaacg
      361 ccaccgtcgc gatcctcaat cagcgggcgc gacgccacgg ggaagcgact tgaaatacgt
      421 ggccacggtg aagaaatggc ccgcatccgg aagtcgccgc tcatggcgtt ctcgaacatg
      481 ggcagcttgt ttcaaagtcg gcatgggcac ggaaattaag gcggcctaga cgccattatt
      541 tcttcacata gttggccccg atctctcggg ctttaggggc ggggattaaa agagatcggg
      601 gccgtgccct gttaggatca gagcatcgcc attatagcgc cgacatcatg gcaaaattgt
      661 aaccgcgggg acgcatctga tccggatgat ggttgccgcc gctgatctag ccgtcgttct
      721 ctctcggcaa tctttcttag cagcagcttc gccccccagt taacagcgaa ttcgcctgtt
      781 aggcggggcg tgcgccggcg cggcttcacc gacgggcggt gcggcgactg tttagctgcg
      841 cgtggtaata cgggctctcg acgcagagtc ccccgatgcc ggacagcgtt gtcatgcact
      901 gctgccagct cgtgtaatag caggacaggg cattcgagtt cttggggcca ccgagcgcgc
      961 accatggata agaataaggc gattgcgcat tgctcacttg cgttgcgccc agcaacgcag
     1021 cggcaatgac aaaaagcatg atgatcggtg tgcgcattgc tgtttctctc cctgtcggcg
     1081 ttttctgtcg tcgttttcgc ttgcctcgca tatcatatca gttttgccga tatggcgaaa
     1141 ccctcggggc ttacatgaag gtgaggccgt gcatcacagg gcaggtcgat gtcccctgac
     1201 gcaacaagcc cgctctgcat tcgcgcacca actgccgtca catacccaaa catcgcgttt
     1261 gtgtgcctac ccacaattgg tcgttagccg agcagtccgg cggagtcaca ttctcggaga
     1321 atgtgagccg aaatcaccgg tggccggaca agcccattgc aacattgacc ggcgtcagtt
     1381 tgtccaagcg cttcgcgagc catcccgcgg gcagatcaac cttgccgaac ggttacgttt
     1441 gtccgtgtca ggatcacgga ccggattgca agagcgcgcc ccccggcgat caggtcgtca
     1501 caaaaaaatt ggcgacggtt cctcttgtgc ccgccgaatt caattctacg ttgccagagg
     1561 gggcgggaaa gagaatcccg agatgaaact gtcaatcacg ttcattgtgg tgggggcgat
     1621 cgtgttggcg agagcgatcc ccgtgcaagc ccaatctgtc gcggagaccg aggggattcc
     1681 tcgtctccca agcgtgttta aaaactgtga ggaaccgctt ccgtggtatt gtataaggcc
     1741 gtctggatcg ctctggttcg gttcgactga gacacttcaa cgctgccgcc gagccgcttc
     1801 attccgggcc aacccagagt ctttgcgccg atgttcggat tggaagcctg gccccaggtg
     1861 agcctcgcat gtggccacct ttcaacgagg cttttgcggt ttccagcccg cacggatgtt
     1921 gatcgatagc gccccacgcg cttcttgccg ggtgtcccgc cgggctgctt gcgctgaccg
     1981 gtacctgctc gcgtctgcgg gaaccttggt gctggggttg tgatgttcgt agtgcctcgg
     2041 ctctgcgccg atgccggtac tcaccgggct gcacgctccc gccagcttgc gcgagtcgat
     2101 cggataggcg acagggtggg tcgccgggcc ggacggccca aaaattcccg tcaaatgcgg
     2161 gacttcttta cgctgaaaga tagacaaatc tgggcggcag atttcggcgc ggcggcaagg
     2221 ctgctcaatg ggtgagcgcg acgccatcgg gaagcgactt gaaatacgcg gccacggcca
     2281 ggtaatagcc ctccggatgg cgccactcat ggagctgtcg aataagggcg gcttgttcaa
     2341 agtcggtatg gacaaagaca tttttcgcgg gcgccccccg aagcgtgcgc tctatattca
     2401 aggcagccat gaagccctga gcccaagcga tgtagattcc ttccactgcc gagcattcct
     2461 cgcaattggc gagaaattcg gcgtacgagt gtccgccagg acccgctatt accgcacatg
     2521 tgtcatct
//
LOCUS       DATILV010000116        10220 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_26470, whole genome shotgun sequence.
ACCESSION   DATILV010000116 DATILV010000000
VERSION     DATILV010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10220
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26470"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..597)
                     /locus_tag="VLJ17_02520"
     CDS             complement(<1..597)
                     /locus_tag="VLJ17_02520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitase family protein"
                     /protein_id="HSV21882.1"
                     /translation="MAARTLYDKIWGDHLVDEQPDGTCLIYIDRHLVHEVTSPQAFEG
                     LRLAGRKVHAPEKTLLVVDHNVPTTDRTKPNPDPESAAQIAYLAENAKLFGLEYFDEF
                     DKRQGIVHIIGPEQGFTLPGTTIVCGDSHTATHGAFGALAYGIGTSEVEHVLATQTLY
                     QKKSKNMRAVIDGKLPQGVTAKDIILAIIGEIGTAGGTG"
     gene            complement(606..995)
                     /gene="rplS"
                     /locus_tag="VLJ17_02525"
     CDS             complement(606..995)
                     /gene="rplS"
                     /locus_tag="VLJ17_02525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HSV21883.1"
                     /translation="MNIIQELEKEQMAKLSAGKEIPDFGPGDTVLVNVKVVEGDRTRV
                     QAYEGVCIGRSGGGLNENFTVRKISYGEGVERVFPLYSPMVDSIRVVRRGKVRRAKLY
                     YLRERRGKSARIGERQERSTEATEAAQ"
     gene            complement(1092..1811)
                     /gene="trmD"
                     /locus_tag="VLJ17_02530"
     CDS             complement(1092..1811)
                     /gene="trmD"
                     /locus_tag="VLJ17_02530"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052906 - tRNA
                     (guanine(37)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HSV21884.1"
                     /translation="MWRATVLTIFPELYPGPLGASLAGKASANGLWSLATVNIRDFAP
                     DKHRTVDDTPAGGGPGMIMKADVLGRAIDAAATDDRPRLLMSPRGRLLTQAQVREFMR
                     GPGIVAVCGRFEGVDERVIEGRGLIEVSIGDYVLAGGDLAAMVLIEACVRLIPGVMGS
                     ESSGAEESFSANLIEYPQFTRPQVWEGLTIPEVLTSGDHGRVDAWRRAEAERLTRERR
                     PDLWVAYRAEQQTGKKGVPKE"
     gene            complement(1815..2453)
                     /gene="rimM"
                     /locus_tag="VLJ17_02535"
     CDS             complement(1815..2453)
                     /gene="rimM"
                     /locus_tag="VLJ17_02535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717967.1"
                     /note="Essential for efficient processing of 16S rRNA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HSV21885.1"
                     /translation="MSGVKYGQPVESSAAPTRSPDKSMRNCVCVAKIGAAHGTGGEVR
                     LWPFTTKPEAVGAYGILQTADGKQAFEIETLRPAGEFLVVRFRGVTDRAAAERLRNIE
                     LYVPRERLPVPDPDEFYYADLIGLQVHDTGGKTVGIVIAVHNFGAGDLLEIAPADGGE
                     SVMLPFSVSTVPTVEIAAGRIVVDLPEGWVAPDPSEAAARSSTLGTVKDTGR"
     gene            complement(2466..2849)
                     /gene="rpsP"
                     /locus_tag="VLJ17_02540"
     CDS             complement(2466..2849)
                     /gene="rpsP"
                     /locus_tag="VLJ17_02540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HSV21886.1"
                     /translation="MSLKIRMARAGTKKRPVYHIVVADSRYPRDGRFIERLGYFNPLL
                     PKDNADRIKFDIEKAKSWLAKGATPSDRILRFLDAAGVRKRPTRNNPERAVPRKERKA
                     RAEAAAKAAAAAPKPAAKPAAPATS"
     gene            complement(2890..4452)
                     /gene="ffh"
                     /locus_tag="VLJ17_02545"
     CDS             complement(2890..4452)
                     /gene="ffh"
                     /locus_tag="VLJ17_02545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0048501 - signal recognition particle,
                     plasma membrane targeting [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005048 - signal sequence binding
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HSV21887.1"
                     /translation="MFEGLSDKLSGILDRLTRRGALTVADVDAASLEVRRALLEADVA
                     LDVVREFVGKLRERAVGVEVVKSVTPGQMVVKIVHDQLIETLGGTADPIDLNAPVPVP
                     IMMVGLQGSGKTTTTAKIARRLNENMRRKTLMASLDTRRPAAMEQLAVLGQQVGISTL
                     PIVPAQTPVQIARRAIEAARLGGYDVVLLDTAGRTTLDDALMTEATEVKAAAHPHEVL
                     LVADSLTGQDAVNLARAFDQRVGLTGIVLTRVDGDGRGGAALSMRAVTGKPIKLIGTG
                     EKLDALEDFHPARIADRILGMGDIVSLVEKAAATIDAEKAMRTAERMRKGAFDLNDLR
                     EQLEQMQKMGGLGGLMGMLPGIAKIKNQIAAANLDDKILKRQVAIIQSMTVEERRRPD
                     VLKASRKKRIAAGSGTKVEEINKLLKMHRGMSDMMKAMGGAKRGPLAGLANALGMGPG
                     MPSPEEMAKLAEKMPGGLPGGLSNMPQLPTGMTELPPQFPRSPGGLPGLGGPKGPGLP
                     GLGGFPGSGKKK"
     gene            complement(4974..5555)
                     /locus_tag="VLJ17_02550"
     CDS             complement(4974..5555)
                     /locus_tag="VLJ17_02550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GyrI-like domain-containing protein"
                     /protein_id="HSV21888.1"
                     /translation="MLVSRNLRLPLAAALVVGFGLSSAVAQTPRSPPAVTVAPNDPFG
                     EEVMMTEMTIIYLAGSGLWDSAFETIVEAFKSVYSAMDKLGAKPNGAPMTIYTATDDT
                     GFQFQAAVPVAQPPATLPGGDIKVGKSPIGKALKFVHRGSYDAMDTTYEAITNYLDEK
                     RLEAKDLFVEQYLKDPVTTPEDDLVIEVYVPLK"
     gene            5717..6589
                     /gene="dapF"
                     /locus_tag="VLJ17_02555"
     CDS             5717..6589
                     /gene="dapF"
                     /locus_tag="VLJ17_02555"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008837 - diaminopimelate epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HSV21889.1"
                     /translation="MSALSNHPFVKMNGLGNAIVVVDMRTKPQPITAGDARAAALAAP
                     YDQLMAVYPPRVTGTDAYVRIFNNDGSEAGACGNGMRCVADILFKASRKTVLTVETRA
                     GVLNCWQGETPLTCTVDMGLPRFKWNEVPLSEEFYDTRAIELQIGPIDRPILHSPSVV
                     SMGNPHAVFWVGDVNAYDLGKIGPLLENHPIFPERANISLARVISPSQVIVRTWERGV
                     GLTQACGSAACAAVVCAARTGRTGRKAVVTLPGGDLGIEWREDDHVLMTGPIAYEFEG
                     RFDPALFTTVGGAP"
     gene            6586..7872
                     /gene="mtaB"
                     /locus_tag="VLJ17_02560"
     CDS             6586..7872
                     /gene="mtaB"
                     /locus_tag="VLJ17_02560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019964395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-
                     methylthiotransferase MtaB"
                     /protein_id="HSV21890.1"
                     /translation="MSVDIVTFGCRLNSYESEVIRRHAAAAGLGTGNDVVIVNTCAVT
                     AEAERQARQTIRRLKRERPKVRIVVTGCAAQINPDHFAAMPQVDRVVGNDLKMHGDAW
                     TEAQSIFARAPDFGIGLDEKVAVNDIMSVRETAGHLIEGIEGRARAYVQVQNGCDHRC
                     TFCIIPFGRGNSRSTPMGGVVEEVRCLARNGYREVVLTGVDLTSYGADLPGAPKLGTL
                     VRQILKHVAGLERLRLSSLDCVEIDDALMEAFSEEDRLMPHLHLSLQAGDDLILKRMK
                     RRHSRADAIVLCQELRRRRPGMVFGADIIAGFPTETEDMFRRSLDLVEECSLTHLHVF
                     PYSPRPGTPAARMPQVPRDVIKDRARRLRRRGEAALRRHLDGEIGSVRRVLTESTAGG
                     RSEHFTQVRFDAAVEPGIIVERKMIGHDGSRLIAAA"
     gene            7886..8518
                     /locus_tag="VLJ17_02565"
     CDS             7886..8518
                     /locus_tag="VLJ17_02565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HSV21891.1"
                     /translation="MTTDGSSHHFVTSIDELEAVYGQPVGPSVVKEIDHVNADYRAFI
                     EAAPFCAMATSGPGGLDCTPRGDPPGFVRVKDEKTLLIPDRRGNNRIDSLRNLIADPR
                     ISLLFLIPGCGETIRVNGCAVISIEPALCESFIFAGKVPRSVIVVTVDRVYYQCAKAI
                     VRSRLWDPATQIDRRELPSSGTILAGISKGAIGGPEHDRTAPERLKATIY"
     gene            complement(8512..9366)
                     /locus_tag="VLJ17_02570"
     CDS             complement(8512..9366)
                     /locus_tag="VLJ17_02570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pseudouridine synthase"
                     /protein_id="HSV21892.1"
                     /translation="MPLKEITPDDMLARVLYRDGLMLIVDKPAGLPVHRGPKGGASLE
                     DYFDVLRFGLPRPPALAHRLDKDTSGCLVLGRHRKALAHLGLLFKHGKVGKTYWAIVE
                     GGPDTDEGTIDLPLGRLDETRGWWMKPDPRGLPSVTTWKVLGRGSSLTVTDLRHNSAP
                     NFSSPPCDEGEAPVRTAPKGMALTSPRCPASGDGEMTWLALTPVTGRTHQLRVHCAAS
                     GWSIVGDNIYGTAPRFGRPLQQLHAREIVVPISKNKPPVRVTAPTPAHMRDLLRACGW
                     TGETPAAQ"
     gene            9394..>10220
                     /gene="ftsY"
                     /locus_tag="VLJ17_02575"
     CDS             9394..>10220
                     /gene="ftsY"
                     /locus_tag="VLJ17_02575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HSV21893.1"
                     /translation="MNDSTSEVTGDPRQTWWRRLRGGLSRTSAAITTAISDLVFKRKL
                     DTGVVEELEELLIRADFGVDVAARVAAAVGEGRYDKMISPDEVKAILATEIEKILAPV
                     AKPLTIDGGCRPFVILVAGVNGSGKTTTIGKLASRYSREGHHVMLAAGDTFRAAAIEQ
                     LKIWGERTASPVVAGTQGADAAGLVYEALAAARTQAIDVLIVDTAGRLQNKAGLMDEL
                     QKIVRVIRKLDPTAPHAVLLVLDATVGQNALSQVGEFSRTAGVTGLVMTKLDGTAKGG
                     "
BASE COUNT         1869 a         3190 c         3148 g         2013 t
ORIGIN      
        1 gccggtgccg cccgcggtac cgatctcgcc aataatggca aggataatgt ccttggcggt
       61 aacaccttgc ggcagcttgc cgtcaatgac ggcgcgcatg ttttttgatt tcttctggta
      121 gagcgtctgg gtcgccagta catgctcgac ttccgacgta ccgatgccat aggcgagcgc
      181 cccgaacgcc ccatgagttg cggtatggct gtcaccgcac acgatcgtcg tgcccggcag
      241 cgtaaagccc tgctccggcc cgatgatgtg gacgatgccc tgtcgcttgt cgaactcgtc
      301 gaaatattcc agtccgaaca gtttggcgtt ctcagccaag taggcaatct gagccgcgct
      361 ttcgggatcc gggtttggct tggtgcggtc ggtggtaggg acattgtggt cgaccacgag
      421 cagcgttttc tcgggcgcat ggaccttgcg gccagcaaga cgcagtccct caaacgcctg
      481 ggggctcgtg acctcgtgga cgagatgccg atcgatgtag atcaggcagg tgccgtccgg
      541 ttgctcgtcg accagatggt ctccccagat cttatcgtag agggtacggg cggccatgga
      601 acccgtcact gcgccgcttc ggtcgcttcc gtgctgcgct cctggcgctc gccaatgcgt
      661 gccgatttac cgcgccgctc gcgcaggtaa tacagcttgg cgcggcgcac cttgccgcgg
      721 cgcaccactc ggatcgagtc gaccatcggc gaatagagcg gaaatacccg ctcgacgcct
      781 tccccgtagg aaatcttgcg caccgtgaag ttctcgttga ggccgccgcc cgaccggccg
      841 atgcagacgc cctcataggc ctgcacgcgc gtacggtcac cttcgaccac cttgacgttt
      901 accaataccg tatcgccggg cccaaaatcc gggatttcct tgccggcgga aagcttcgcc
      961 atctgctctt tttcgagctc ctggattatg ttcatgaaaa atctccgtcg gcagctcccg
     1021 atcccgggac agcttaaggg gaggcagggg tgccttttcg gggccgccta tacgacaaag
     1081 tcacggcttt gtcactcttt cggcacgcct ttcttgccgg tttgctgctc agctcgatac
     1141 gccacccaaa ggtctggccg ccgctctcgg gtcagacgtt cggcctctgc ccgccgccaa
     1201 gcgtcgaccc ggccgtggtc tccggaagtg agcacctccg ggatggtgag gccttcccaa
     1261 acctgcggcc gggtgaattg agggtattcg atgagattgg cggagaagct ttcttccgcc
     1321 cccgaagact cgctccccat gacgccggga atcaaccgta cgcaagcctc gatcagcacc
     1381 atggcggcga ggtcgccgcc cgccagcacg tagtcgccga tcgacacttc gatcaggccg
     1441 cgcccttcga tgaccctctc gtcgacccct tcgaagcgac cgcacaccgc cacaatcccg
     1501 ggtccccgca tgaattcccg cacctgcgct tgggtcagca gccgaccgcg cggcgacatc
     1561 agcaagcgcg ggcgatcgtc agtcgccgcg gcatcgatcg cccggccgag tacatcagcc
     1621 ttcatgatca tgccgggacc acccccagcc ggggtatcat cgacagtgcg gtgcttgtcg
     1681 ggggcaaaat cacggatatt gactgttgca agcgaccaaa ggccgttggc gcttgccttg
     1741 ccggcgaggc ttgcccccaa tggtcccgga tacagttcag gaaagattgt aaggacagtg
     1801 gcgcgccaca tcggttaacg gccggtatcc tttacggtcc ccagggttga ggagcgcgct
     1861 gcggcttccg acgggtctgg cgcaacccac ccctccggca ggtcgacgac gatacgcccg
     1921 gctgcaatct caaccgtcgg gacggtgctt accgagaatg gcagcattac ggattccccg
     1981 ccatctgctg gtgcgatttc caagagatcg ccggcgccaa aattatgaac cgcgataacg
     2041 atgccaaccg tctttccgcc cgtgtcgtgc acttggagtc cgatcaggtc ggcataatag
     2101 aattcgtccg gatccgggac cggcaaccgc tcacgcggca cgtagagctc aatattgcgc
     2161 aaccgttcgg cagccgcacg gtcagtcacg cctctaaagc ggacaaccaa gaattccccg
     2221 gctggccgca gggtttcgat ctcgaatgcc tgctttccat cggccgtttg tagaatgcca
     2281 taagctccga cggcctccgg tttggtcgtg aatggccaca gcctgacctc gccgcctgta
     2341 ccatgcgccg ccccaatttt ggcgacacag acgcaatttc gcatcgactt atctggcgat
     2401 cgtgtcggcg ccgcggagga ctcaacgggc tgcccatact tcacgcccga catggggggc
     2461 tatgctcagc ttgtcgccgg ggccgctggc tttgcggcgg gctttggagc cgcggcggcc
     2521 gctttggcgg cagcttcggc tctggccttg cgctctttgc ggggaaccgc ccgctcggga
     2581 ttgttgcgcg tggggcgttt gcgcacgccg gcggcatcga ggaaacgcag gatgcgatcg
     2641 gacggagtcg cgccctttgc gagccagctc ttggccttct cgatatcgaa tttgatccgg
     2701 tccgcattgt ccttcggcag caagggattg aaatagccca gccgttcgat gaaacggccg
     2761 tcgcgcggat agcggctgtc cgccaccacg atgtgataga caggccgctt cttggtgccg
     2821 gcacgggcca tccggatctt cagagacatt tggcgtcctt tctcggtgcg atcaatcgtg
     2881 tgggcaagct catttctttt tgccggagcc cggaaagccg ccgagacccg gtaatcctgg
     2941 tcccttgggg ccaccgagcc ccggcaagcc acccggtgaa cggggaaatt gcggggggag
     3001 ctccgtcatt ccggtcggga gctgcggcat gttggagagg ccgcccggca gaccgccagg
     3061 cattttttcg gcgagctttg ccatttcctc ggggcttggc atgccggggc ccatcccaag
     3121 cgcattggcg aggcccgcga gcggaccacg cttggcgccg cccatggcct tcatcatgtc
     3181 ggacatgccc cggtgcatct tcaggagctt gttgatttcc tcaaccttgg tgccggagcc
     3241 ggcggcgatg cgcttcttgc gactggcctt gagcacatcg gggcgacgcc gctcctcgac
     3301 cgtcatcgac tggatgatag cgacctggcg cttgagaatc ttgtcgtcga ggttcgcggc
     3361 ggcgatctgg ttcttgatct tcgcaatgcc cggcagcatg cccatcaatc cgcccaggcc
     3421 gcccatcttc tgcatctgct cgagctgctc gcgcagatcg ttgagatcga acgcgccctt
     3481 acgcatacgc tccgcggtcc gcatggcctt ctcggcatcg atcgttgccg cggccttctc
     3541 gaccaacgaa acgatgtcgc ccatgccgag gatccggtcg gcgatgcggg ccggatggaa
     3601 atcctccagc gcatcgagct tttcgccggt gccgatgagc ttgatcggct tgccggtgac
     3661 agcccgcatg gacagcgctg cgccgccgcg cccgtcgcca tcgaccctcg tcagcacgat
     3721 gccggtaagg ccgacccgct ggtcgaacgc gcgcgcgaga ttgacggcgt cctggccggt
     3781 gagactgtcg gccaccagaa gcacttcgtg cgggtgggca gccgccttca cctcggtggc
     3841 ctccgtcatc aaggcgtcgt caagcgtcgt gcggccggcg gtgtcgagca gcaccacgtc
     3901 atagccgcca aggcgagcgg cctcgatggc gcgtcgcgcg atctgcaccg gcgtttgtgc
     3961 gggaacgatt ggcagggtgc tgatcccgac ctgctgcccc agaaccgcca gctgctccat
     4021 ggcggccggg cggcgcgtgt caagcgacgc catcagggtc ttgcgccgca tgttctcgtt
     4081 gaggcgccgc gctatcttgg cagttgtggt ggtcttgccc gagccttgca ggccgaccat
     4141 catgatcgga accggcaccg gcgcgttgag atcgatggga tcggcggtac ccccgagcgt
     4201 ctcgatcagc tggtcgtgaa cgatctttac caccatctgg ccgggtgtta ccgacttcac
     4261 cacctcgacg ccgaccgccc gttcacgcag tttaccgacg aactcacgca ccacgtcgag
     4321 cgcgacatcg gcctcgagca gtgcacgccg gacctccagt gacgccgcgt cgacatcggc
     4381 aaccgtaagg gcgccacgcc gcgtcaaccg gtcaagaatg ccggacaact tgtcggacaa
     4441 gccttcgaac atccaaaaca cctagatcgc ccgagggcgc atagcgctgt cggacgttgg
     4501 cctccgatct cacgggaccg ggcggcggct cactcacggc tcattcgaga gcccggcaga
     4561 cttatggccg gcgggtcgca aagtcaacga tgggttcgat tgtcgttacc gcaactgtgc
     4621 ctggccggcc atcatcactg gttgagccga actcgccgag ccggcctgcg cattggttcg
     4681 ttccgggatc gataggtccg gtccggccaa gcggtacctc cgcgggcgtg gtccttggcg
     4741 cagaattggc agctaccgat tcatcatgat tgatggcggt tgcaatgatt tccgcacagt
     4801 cgcgtcgtcg atcgcgtgaa tggccgccaa agccttatcg cgcgtcgact ccagcgtttg
     4861 ccacgcggct ccgcacctcc agcacgccgt cgggacagtc gatggccggt tattgatccc
     4921 gtccgattcg aggacgtttc gacgctatgt gccgataaac aatccgcttt tactcactta
     4981 agcggcacat agacctcgat cacgaggtcg tcttccggcg tcgttaccgg gtccttcaaa
     5041 tattgctcga caaacaaatc cttggcttcg agcctctttt catcgaggta gttggtgatt
     5101 gcctcatagg tggtatccat cgcgtcgtag gagccgcgat ggacaaattt gagcgccttg
     5161 ccgatcggcg atttgcccac cttgatgtcg ccgcctggca gcgtggcagg tggctgtgca
     5221 accgggactg cggcctgaaa ttgaaatccc gtatcgtcgg tagccgtgta gatggtcatg
     5281 ggcgccccgt tgggtttggc gccaagtttg tccattgcgc tataaaccga cttgaacgct
     5341 tccacgatcg tttcgaatgc ggaatcccat aggccggaac cggcgagata gatgatggtc
     5401 atctcggtca tcatcacttc ttcgccgaaa ggatcgttgg gtgcgacggt gaccgcgggt
     5461 ggggaccggg gtgtctgcgc aacagcgcta gacaggccga agcccaccac caatgctgcc
     5521 gcgaggggca gccgcaaatt tcgcgacacg agcattgaaa tctcccccag gtccattttc
     5581 ccggcgacgc tgtcattcgg gcatatctgg acccggcacg gtgggccggc cactgatttt
     5641 atacacgatt gcgcaagcgg ctggccatga aatcgctggc cccatataac cggaaacata
     5701 tcggcaagat cgaggcatga gcgctttatc caatcatccc ttcgtgaaga tgaacggtct
     5761 cggcaacgcg atcgtggtgg tggatatgcg gacgaagccg cagcccatta ccgctggtga
     5821 tgcacgtgcg gccgcgctgg ccgcaccgta cgaccaactg atggcagtct atccgccgcg
     5881 tgtgaccgga actgatgcct acgtgcgcat cttcaataat gacggttccg aggccggtgc
     5941 ctgcggcaac ggtatgcgct gtgttgccga tattttattc aaagcaagcc gcaagaccgt
     6001 gctgacggtc gaaactcgcg ccggtgtgct gaattgttgg cagggcgaga caccattgac
     6061 gtgcacagtc gacatggggc taccccggtt taaatggaat gaagttccct tatcagagga
     6121 gttttacgac acccgggcaa tcgaattgca aatcggaccg attgatcggc cgatcctgca
     6181 ttcgccctcg gtcgtcagca tgggcaaccc tcatgcggtg ttctgggtcg gcgacgtgaa
     6241 tgcctatgat ctgggcaaga ttgggccgtt gctggaaaac catccgatct ttccggagcg
     6301 cgccaacatt tctctcgcca gggtgatttc gccctcgcag gtgatcgtac ggacctggga
     6361 gcgtggcgtc gggctgaccc aagcatgcgg ctctgcggct tgcgcagcgg tggtatgcgc
     6421 tgcgcgcacg gggcgcacgg ggcgcaaggc tgtcgttacg ttaccgggag gcgatttggg
     6481 catcgaatgg cgtgaagatg atcatgtatt gatgactggg ccgatcgcat atgagtttga
     6541 aggccgtttc gatccggcgc tgttcacaac ggtgggcggc gccccatgag tgtcgatatc
     6601 gtcacattcg ggtgtcggct caactcctat gaatcggagg tgattcgtcg tcatgccgcg
     6661 gccgccggcc ttgggacagg caacgacgta gtgatcgtca atacttgcgc cgttacggcc
     6721 gaggccgaac gccaagcgcg ccagaccatt cgtcggctca agcgtgaacg cccgaaggtg
     6781 cgaatcgtcg tcacgggctg cgcggcacag atcaatcccg accacttcgc cgcaatgccg
     6841 caggtggatc gcgtggtcgg aaacgaccta aaaatgcatg gcgacgcttg gactgaagca
     6901 caaagcattt tcgcccgtgc cccggatttc ggcatcggcc tggacgagaa ggtcgccgtc
     6961 aacgatatca tgtcggtaag ggaaaccgcg gggcacctga tcgaaggcat cgaagggcgt
     7021 gcccgcgcct atgtgcaggt ccagaatggc tgcgaccatc gctgcacctt ctgcatcatc
     7081 ccattcgggc gcggaaactc tcgctcgaca ccgatgggcg gggtggtcga agaggtgcga
     7141 tgcctcgccc gcaatggcta tcgcgaggtt gttctgaccg gcgtcgatct cacgagctac
     7201 ggcgccgatc tgccgggggc gcccaagctc ggaacgctag tccggcaaat tctcaagcat
     7261 gtggcgggtc tcgaacggct gaggttgtcc tcgctcgatt gcgtcgagat tgatgatgcc
     7321 ctgatggaag cgttttccga ggaggacaga ttgatgccgc acttgcattt gtcgctgcag
     7381 gccggtgatg acctcatcct caagcgcatg aagcggcgcc attcgcgtgc ggacgccatc
     7441 gtgctttgcc aagaactgcg ccgccggcgt cccggcatgg tgtttggcgc cgacatcatt
     7501 gcgggatttc cgaccgaaac cgaggacatg ttccgccgtt cccttgacct cgtcgaagaa
     7561 tgcagcctta cacatctcca cgtattccca tactcaccac gccccggcac gcccgcagcc
     7621 cgcatgccgc aagtgccgcg tgatgtcatc aaagatcgtg cccgccgcct gcgccgccgc
     7681 ggcgaggccg cgttgcgccg ccatctcgac ggcgagattg ggtcggtgcg tcgcgttttg
     7741 acggagtcca ccgcaggcgg ccgcagcgag catttcacgc aggtccgttt cgatgctgct
     7801 gtcgaacccg gaatcattgt cgagaggaaa atgatcggcc atgatggtag tcgcctgatc
     7861 gcggctgcat gaaagggaat ggggcatgac gactgacgga tcgagtcatc atttcgtcac
     7921 ctcgattgac gagcttgaag cagtttacgg gcagccggtt ggaccgtcgg tcgtgaagga
     7981 gatcgatcac gtcaatgccg actatcgcgc cttcatcgaa gcggcgccat tctgcgcgat
     8041 ggcaactagc ggtcctggcg ggctcgattg cacgccgagg ggcgatccgc cgggctttgt
     8101 gcgcgtcaag gatgaaaaga cactgctgat tccggatcgc cgcggcaaca atcgcatcga
     8161 cagcctgcgt aacctcatcg cagatccgcg catctcgttg ctgttcttga tccccggctg
     8221 cggtgagacg attcgagtca acgggtgcgc cgtgatctcg atcgagccgg cactgtgtga
     8281 aagcttcatt ttcgccggaa aggtgccacg cagcgtcatc gtcgtcacgg tggatcgtgt
     8341 ctattaccag tgcgccaagg cgatcgtgcg gtccaggctg tgggacccgg caacgcagat
     8401 cgaccgcaga gagctcccat cttccggtac cattctggcc ggcatcagca agggcgcaat
     8461 cggtggtccg gaacacgatc gaaccgcgcc ggaacgcctg aaggccacca tctattgagc
     8521 cgccggcgtc tcgccggtcc agccgcacgc tcgcagtaga tcgcgcatgt gggccggtgt
     8581 cggtgcggtg acacgcacag gcggcttatt ttttgagatc ggcacgacga tttcacgtgc
     8641 gtggagttgt tgcagcggtc ggccgaagcg cggcgcggtg ccgtagatat tgtcgcccac
     8701 gatcgaccat ccggaagccg cgcagtgcac ccgcaattga tgcgtccggc cggtcaccgg
     8761 tgtaagcgca agccaagtca tttccccgtc cccgcttgcg gggcagcgcg gggaggtcag
     8821 ggccatcccc ttaggcgctg tccgaactgg agcctcccct tcgtcacaag ggggagagga
     8881 gaagttaggc gcgctgttat ggcgtaaatc agtaaccgta agcgaggaac cccgccctag
     8941 caccttccaa gttgtcaccg aaggcaggcc ccgcgggtcg ggcttcatcc accagccccg
     9001 ggtttcgtcg aggcgaccaa gcggcagatc gatcgtgcct tcatcggtat ccggcccccc
     9061 ttctacaatg gcccaatagg tcttgcccac cttgccgtgc ttgaacaaaa gccccaggtg
     9121 agcaagtgcc ttgcgatggc gcccaagcac gaggcatccg gaagtgtcct tgtcgaggcg
     9181 atgtgccagg gcaggcgggc gcggcaggcc gaaccgcagg acgtcgaaat agtcctcgag
     9241 gctcgctccc cctttcggtc cgcgatgaac cgggagcccg gcgggcttgt cgacaatcag
     9301 catcaggcca tcgcgataaa gcacgcgagc cagcatatcg tcgggagtaa tctctttaag
     9361 tggcatgacg aaaccggtat cacggccgcc gacatgaatg acagcacatc cgaagtgact
     9421 ggcgaccccc gtcaaacctg gtggcgccgt ctgcgcggtg gcctgagccg cacctcggcc
     9481 gccattacca ccgcaatctc ggacctcgtt ttcaagcgca agctcgatac cggggtggtc
     9541 gaggaactcg aggaattgct tattcgtgcc gattttggtg tcgatgttgc ggctcgcgtc
     9601 gcggcagcgg tgggtgaagg ccgctacgac aagatgatca gccccgacga ggtcaaggca
     9661 attcttgcaa cagagatcga gaagatccta gccccggtcg caaagccgct tactatcgac
     9721 ggcggatgcc ggccattcgt catcctggtg gccggcgtca atgggtcggg caagaccacg
     9781 accatcggca agcttgcctc aagatattca cgcgaaggcc accatgtgat gttggcggcc
     9841 ggcgacacct tccgggccgc ggccatcgaa cagctgaaga tctggggaga gcgcaccgca
     9901 agccccgtcg ttgccggcac ccaaggcgcc gatgccgccg gacttgtata tgaggcgctg
     9961 gcggcggctc gtactcaagc aatcgacgta ctgatcgtcg ataccgccgg acgtctgcag
    10021 aacaaggcag gcttgatgga cgaattgcaa aaaatcgttc gcgtcatccg aaagctcgac
    10081 cccacggcgc cccacgcggt gctgctggtg ctcgacgcga cagtaggcca gaatgcccta
    10141 tctcaggtcg gggaattctc ccggaccgca ggcgttaccg gccttgtcat gaccaagctg
    10201 gacggtaccg ccaagggcgg
//
LOCUS       DATILV010000117         2544 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3860244, whole genome shotgun sequence.
ACCESSION   DATILV010000117 DATILV010000000
VERSION     DATILV010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2544)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2544)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2544
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3860244"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1466)
                     /gene="gcl"
                     /locus_tag="VLJ17_02580"
     CDS             complement(<1..1466)
                     /gene="gcl"
                     /locus_tag="VLJ17_02580"
                     /EC_number="4.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011969935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009028 - tartronate-semialdehyde synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate carboligase"
                     /protein_id="HSV21894.1"
                     /translation="MTKMTAAAAAVCVMEQEGVRCAFGVPGAAINPLYAALRPRNEIN
                     HFLARHVEAASHMAEGYTRAKPGNIGVCIGTSGPAGTDMITGLYSAWADSIPILCITG
                     QAPRARLYKEDFQAVDIESIAKPVTKWAVTVREPALVPRVFQQAFHLMRSGRPGPVLI
                     DLPFDVQMGEVEFDIETYEPLPVYRPKATRAQTEKALTMLNASERPLIVAGGGIINAD
                     ACSLLVEFAEITGIPVVPTLMGWGSIPDDHALMVGMVGLQTAHQYGNATLLASDFVLG
                     IGNRWANRHTGSIDVYTKGRTFVHVDIEPTQIGRVFAPDYGIVSDAKAALELFVAISR
                     EWKASGKLKDRADWVAECRERKRKMLRRTHFDDVPLKPQRVYEEMNKAFGRDTCYVST
                     IGLSQIAAAQFLHVYHPRHWINCGQAGPLGWTIPAALGVRAADPDRRIVAISGDYDFQ
                     FMMEELAVGAHFKLPYLHVVVNNSYLGLIRQSQRGFNM"
     gene            1602..>2544
                     /locus_tag="VLJ17_02585"
     CDS             1602..>2544
                     /locus_tag="VLJ17_02585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003526409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HSV21895.1"
                     /translation="MELRHLRYFLVVAEELSFTAAAARLRISQPPLSQQIQDLETELK
                     TPLFLRTSRKVELTPAGIAFLDHVRSILGQVGQAVEQTQAIGSGKSGKLDIGATGSVL
                     LGPLASIIAHYSRQHPEVLVRLHEMAPLAQFDSLHARKTDISFLRSPTEDPELVTEVA
                     WREQVWVALPTGHRLSKRDRLRLADLRNDDHVFLRLEDSPFAQYLRNCCVEAGFIPRI
                     SQQVVEAYSLTSLVAGGLGVALVPESVRHLSRRGVIYRPLCEPAPAADVKMVFRPDGN
                     PVVARFVELARELLLAAPSLETVVAQATKIRVNKTSGD"
BASE COUNT          501 a          764 c          752 g          527 t
ORIGIN      
        1 tccatattga aaccgcgctg cgattgtcgg atcaggccga ggtacgagtt gttcacgacg
       61 acatgcagat agggcagctt gaaatgggcg ccaaccgcta gctcctccat catgaattgg
      121 aagtcgtaat cgccggagat cgcgacaatt cgccgatcag gatccgcggc tcgcacgcct
      181 agcgctgccg gaatggtcca gccgagaggg cctgcctgac cgcaattgat ccaatggcgc
      241 gggtgataga cgtgcaggaa ttgtgcggca gcgatctggg agagaccaat cgtgctgaca
      301 tagcaggtgt cgcggccgaa tgctttgttc atctcctcat agacgcgttg cggcttgagc
      361 ggcacgtcgt caaaatgcgt gcgccgcagc atcttgcgct tgcgctcgcg gcactccgcg
      421 acccaatccg ctcgatcctt gagcttgccg gacgccttcc actcgcggga aatcgcaacg
      481 aacagctcga gcgctgcttt tgcatccgag acgatgccgt agtcgggtgc aaagacgcgg
      541 ccgatctggg tgggctcgat gtcaacgtga acaaacgtcc ggcctttggt gtagacatcg
      601 atcgagccgg tgtgccgatt ggcccagcga ttgccgatgc cgagaacgaa atccgaagca
      661 agtagcgtcg cgttcccgta ctgatgtgca gtctgcagac cgaccatgcc gaccatcagc
      721 gcatggtcgt ccggaatcga accccagccc atgagagttg ggacgacggg gatacccgtg
      781 atctcggcga attcgacgag cagcgagcaa gcgtccgcat tgatgatgcc gccgcccgca
      841 acaatgagcg gacgctccga cgcgttcagc atcgtgaggg ctttctcggt ctgcgcccgc
      901 gtggctttcg gcctatagac cggcagtggc tcatacgttt cgatgtcgaa ttccacctcg
      961 cccatctgca cgtcgaaagg aagatcaatc agcacgggcc cgggacggcc cgagcgcatc
     1021 aggtgaaatg cctgttggaa aacccgtggc acaagcgcag gctcccgcac cgtgaccgcc
     1081 cattttgtca ccggcttggc gatcgactcg atgtccaccg cctgaaagtc ttctttgtag
     1141 agccgggcac gcggtgcctg cccggtaatg caaaggattg gaatggaatc cgcccacgcg
     1201 gaatagagac ccgtgatcat atcggttcca gctggacccg aggtgccgat gcacacgccg
     1261 atgttgcccg gctttgctcg agtatagcct tcggccatgt gcgaggcagc ttcgacgtgc
     1321 cgggcgagaa aatgattgat ctcgttgcga gggcgtagag cggcgtaaag cggattgata
     1381 gctgctccgg gcacgccgaa ggcgcatcgg acgccttcct gctccatgac gcacaccgcc
     1441 gccgctgccg cagtcatctt cgtcatcgtt tcctcccgtt attcgcctct cattgttctt
     1501 attgctgagg cgtgaccgcg agcatggcac ttgactatca agtcgtctaa tatattgttc
     1561 gaataaatcc atatgtatgt catatcgttt cgggggccga agtggagctt cgccaccttc
     1621 gctatttcct cgtcgtcgcc gaggagttga gttttacggc agcggctgct cggttgcgga
     1681 tctcgcagcc cccgctcagt cagcagattc aagatctcga aactgagttg aagacgccgc
     1741 tttttctgcg caccagccgt aaggtcgagc tgacgccggc cgggattgcg ttccttgacc
     1801 acgtacgatc gatattgggc caagtcgggc aggccgtcga acagacgcag gcgatcggtt
     1861 cgggcaagag cggcaagctc gacatcggcg ctaccggctc cgtgttgctg ggcccgcttg
     1921 cttcaatcat cgcccactat agcaggcaac atccggaagt attggtgcgg ctgcatgaga
     1981 tggcgccgct tgcccaattc gactccctgc atgcccgaaa aaccgacatc agctttcttc
     2041 gaagcccgac ggaggatccc gagctcgtca ccgaagtcgc ctggcgggag caggtctggg
     2101 tcgctcttcc aacaggtcat cgcctatcca agcgcgatcg cctgcgtctt gccgatctgc
     2161 gcaatgacga ccacgtgttt cttcgtctcg aggattcgcc atttgctcaa taccttcgca
     2221 actgctgtgt cgaggcggga ttcatcccac gcataagcca gcaagtggtc gaggcatatt
     2281 cgttgacaag tcttgtcgcc ggcggtctgg gcgtggcgct ggtgccggag agcgttcgcc
     2341 acctttcgcg acgaggcgtc atctatcgcc ccctctgtga gcccgcgccg gcggccgacg
     2401 tgaaaatggt cttccggccc gacggcaacc ccgttgtggc aagatttgtc gagcttgcac
     2461 gcgagctact gctagccgcc ccatcacttg agacggtcgt agcccaggct acaaaaattc
     2521 gagtgaacaa gactagcggt gaca
//
LOCUS       DATILV010000118         3705 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2583305, whole genome shotgun sequence.
ACCESSION   DATILV010000118 DATILV010000000
VERSION     DATILV010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3705)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3705)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3705
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2583305"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1022
                     /locus_tag="VLJ17_02590"
     CDS             <1..1022
                     /locus_tag="VLJ17_02590"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV21896.1"
                     /translation="MQLFLFGYAINTNPQHLPTGLLSVEHSKYERTIIAALHNSGYYD
                     IRMLASEVEAERALAQGELMFVIAFPPNFDRAVDRGDRPSVLIDADATDPSAIGNATA
                     ALATIATVLNRDLPPVIRATPVAPAFQFVVHARYNPEQLTVLNIVPGLICIVLMMSTL
                     FMTTLSITKERERGTMENLLAMPVRPIEVMLAKIVPYVVIGYIQVVLILVASALFFQL
                     PLRGSLVTLLMALGLFIAGNLALGITFSTVSANQMQAMQFAQFTLLPSFMLSGFMFPF
                     RGMPLWAQWVGEVFPTTHAMRIVRGVLIKGNGTPDIVPELWPIAVFVVAVIAVAVWCY
                     RETLE"
     gene            complement(1056..2099)
                     /locus_tag="VLJ17_02595"
     CDS             complement(1056..2099)
                     /locus_tag="VLJ17_02595"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HSV21897.1"
                     /translation="MRVLILDDSASSVMLLVQLVGKIDGCTAVPFTDPAKALSEVEAN
                     AIDLALVDYMMPGLNGIDVVKTLRAMPGGAELPVVMLTGRDAIRYAALDAGVTDFLTK
                     PFDTVEVKLRIRNMLKLRETQNKLRDKASWLAEEVRKATAALTLREEEVIFRLSRAAE
                     YRDVDTGQHIERMARYSLLIAEALGLDGEACRSIYLACPMHDVGKIAIRDAILLKPGR
                     YSAEERATMKEHTIHGYEILANSNSTLIQTAAVIALSHHEQWDGAGYPRGLSRNEIPL
                     FARIAAVADVFDALTSERPYKNAWSIEEALSHIRESSGKQFDPACVAAFIQRWNDVRI
                     IHGRHRSPLRAVG"
     gene            complement(2241..>3705)
                     /locus_tag="VLJ17_02600"
     CDS             complement(2241..>3705)
                     /locus_tag="VLJ17_02600"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV21898.1"
                     /translation="ILDISKLEEQKIEFEAIPFSPAAIVDDVISIMCPRIEEKGLAWS
                     LSPDQAMPQALLGDPTRIRQVLINLVGNAAKFTEAGTVELAFQCSSCVDGIATIEFSV
                     RDSGIGIAPDRLSGLFQYFTQADESINRRFGGTGLGLAISKRIIEQMGGEIDVKSTLG
                     VGSTFSFRLTLPTSDIALPEPCKDSDRLDPARRTLTERVEPLRILLAEDSTTNQLVVS
                     RLLQEFKVIITVASNGHEAVKQAASGTFDVIFMDMRMPEMDGLEATRTIRALGGALAD
                     LPIIALTANAFAEDVNACRAAGMSDFVAKPIRKNILVEKLAAAVSAHLRPPKQAKEIA
                     IESPCPGAPARGTLAIVPPAAVAIIDVAPIFNYSALKEFVQEIGADGARATFDVFFTE
                     TSARLKLLQGLSSVSDRDSIETEAHTVKGASGTFSLVQVSELAEKLEHSAQTISPDEY
                     RELLDRLQASFETARDEVENALVWCTLDVQDGARATA"
BASE COUNT          731 a         1142 c         1025 g          807 t
ORIGIN      
        1 tcatgcagct gttcctgttc ggctacgcca ttaacaccaa tccgcaacat ctgcccacgg
       61 gcctgttgtc agtcgagcac tcgaaatacg agcgcaccat tatcgcggcg ctgcacaaca
      121 gcggctatta cgacatacgc atgttggcga gcgaggtaga agccgagcgg gcgctggcgc
      181 agggcgagtt aatgttcgtc atcgcgtttc cgccaaactt cgaccgcgcg gtcgaccgcg
      241 gcgaccggcc ctcggtgctg atcgacgcag acgctaccga ccccagcgca atcggcaacg
      301 cgacggcagc actcgcaacg atcgcgaccg tgctcaaccg cgacctaccg ccggtcatac
      361 gcgcaacgcc ggtggcgccc gcgtttcagt tcgtggtcca cgctcgttac aatcccgaac
      421 aactgaccgt gctcaacatc gtgccggggc tgatctgcat cgtgctgatg atgtcgacgc
      481 tgttcatgac gacgctgtcg atcaccaagg agcgtgagcg cggcaccatg gagaacctgc
      541 tggccatgcc agtgcggccg atcgaggtca tgctcgccaa gatcgtaccc tatgtagtta
      601 taggctacat ccaggtggtg ctgatcctgg tcgcttcagc gctgttcttc cagctgccgc
      661 tgcgcggctc gctggtcacg ctcctcatgg cgctgggtct cttcatagcc ggcaatctcg
      721 cgctcgggat cactttctcg acggtgtcgg cgaaccagat gcaggccatg cagttcgctc
      781 aattcactct gctaccgtcc ttcatgctgt ccggcttcat gttcccgttc cgcggcatgc
      841 ccctgtgggc ccaatgggtc ggcgaagtgt ttccaaccac ccatgccatg cggatcgtac
      901 ggggcgtgct catcaagggt aacggcaccc ccgacatcgt ccccgaatta tggccgatcg
      961 cagtcttcgt ggtggcggtg atcgcggtcg cggtgtggtg ctatcgtgag acgctggagt
     1021 gagggcctag gcctgtttgc gcgctgctgc ctgcgtcagc ccaccgcgcg caacgggctt
     1081 cggtgtctgc catggatgat ccggacgtca ttccaacgtt gtataaacgc cgccacgcag
     1141 gccggatcaa actgcttgcc gctgctttcc ctgatgtgag agagcgcctc ctcgatcgac
     1201 catgcgttct tgtacggccg ctcagacgtc agcgcgtcga acacatcagc gaccgccgcg
     1261 atccgcgcaa acagcggaat ctcgttgcga gacaagcccc gcggataacc cgctccgtcc
     1321 cattgttcgt gatgcgataa tgcgatgacg gctgcagtct gaatgagtgt ggagttgcta
     1381 ttggcaagaa tttcatagcc gtgaatcgta tgctctttca tcgttgcccg ttcttcggcc
     1441 gaatatcttc ccggttttag caggatcgcg tcacggatag caattttgcc gacgtcgtgc
     1501 attgggcacg caagataaat gctacggcac gcctctccat caagacccag cgcctcggcg
     1561 atcagcaggc tatatcgagc catacgttcg atgtgctggc ctgtatccac atcgcggtat
     1621 tccgccgctc gcgaaagacg aaaaatgact tcttcctcgc gcaacgtcag cgcggcagtt
     1681 gctttcctga cttcttcggc gagccaggag gctttgtctc tcagtttgtt ctgcgtttca
     1741 cgaagcttta acatatttct gatgcgcaat ttcacctcga cggtatcgaa aggcttcgtc
     1801 agaaaatccg tgacgccggc atccagggcg gcatatcgaa tcgcatcacg gccggtcaac
     1861 atgacgaccg gcagttctgc acctccaggc atcgcacgaa gtgtcttgac aacatcgatc
     1921 ccattaagcc caggcatcat gtagtctacc agcgcaagat caattgcgtt ggcctcgacc
     1981 tccgaaagtg ctttggcggg gtctgtgaaa ggcaccgctg tacagccgtc aattttgcca
     2041 acgagctgca ctaagagcat cacgctgctt gcactatcgt cgagaatgag aacacgcata
     2101 gctgcgccct gctccattat ttaatcgcta agctaccact gaacctcttc gataaaccct
     2161 aaagcccgcc gaggtaccgc gtctcaatca tcgacgatta agaatgtctt accgccgttc
     2221 ccgacttgca tgagatttga ctacgcggtc gctcgcgcgc cgtcctgcac atcaagcgtg
     2281 caccaaacca gcgcgttttc aacttcgtcg cgcgccgtct cgaagctcgc ttgcagccgg
     2341 tcgagcaact cacggtattc gtccggcgaa atggtttgcg cgctatgttc cagcttctcg
     2401 gccagttccg acacctggac caggctgaag gtgccggaag cccctttcac ggtatgggcc
     2461 tcggtttcga tgctgtcccg gtcgcttacg ctcgacagac cctgcagcag cttcaggcgc
     2521 gcagatgtct ctgtaaaaaa tacgtcgaag gtcgcacgcg caccatccgc cccgatctct
     2581 tgtacgaact ccttgagcgc tgagtaattg aagatcggcg cgacatcgat gatggcgact
     2641 gccgcgggcg gcacgatcgc aagagttccc cgtgcgggcg cacccggaca gggtgattct
     2701 atggcgatct ccttggcctg ttttggcggt cgcagatgag cagacacagc cgctgccaac
     2761 ttctcgacca ggatattttt gcggatcggc ttggcgacga agtcgctcat cccggcggca
     2821 cggcatgcat tgacgtcttc ggcgaacgcg ttcgcggtca gtgcgatgat tgggaggtcg
     2881 gccagcgccc cgccgagtgc gcggattgtc cgtgtcgcct cgaggccgtc catctccggc
     2941 atccgcatgt ccatgaaaat gacgtcgaat gtgccgctag ctgcctgctt cacggcctcg
     3001 tgcccgttgc tcgcaaccgt gataatcacc ttgaattcct gcaacagcct gctgacgaca
     3061 agttgattgg tcgtgctgtc ttcggcgagc aggatgcgca ggggttcgac ccgttcggtc
     3121 aaggtgcgcc tggccggatc gagccgatcg gagtccttgc aaggttcagg cagtgcgata
     3181 tcagaagttg gcaacgtcag cctaaacgag aatgtcgagc cgacgccaag cgtcgatttg
     3241 acgtcgatct caccgcccat ttgctcgatg atgcgcttgc tgatcgcgag cccgagaccc
     3301 gtaccgccga accgccgatt gatcgattcg tctgcttgcg tgaaatattg aaacagtccg
     3361 ctgagacggt caggagcaat tccgatgccg gaatcccgta ccgaaaattc aatggtcgcg
     3421 ataccgtcaa cgcacgacga gcattggaat gcaagctcca ccgtgcccgc ctccgtgaac
     3481 ttggccgcat tgccgacgag attgatcaat acctggcgga tgcgagtcgg atcaccgagc
     3541 aacgcctgcg gcatcgcttg gtccggcgac aaactccagg caagtccctt ttcttcgatc
     3601 ctcggacaca tgatgctgat aacatcgtcg acgatcgccg caggtgagaa gggaatcgcc
     3661 tcaaactcga tcttttgctc ctccagcttt gaaatatcga gaata
//
LOCUS       DATILV010000119         2366 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1305934, whole genome shotgun sequence.
ACCESSION   DATILV010000119 DATILV010000000
VERSION     DATILV010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2366)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2366)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2366
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1305934"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(102..>2366)
                     /locus_tag="VLJ17_02605"
     CDS             complement(102..>2366)
                     /locus_tag="VLJ17_02605"
                     /inference="COORDINATES: protein motif:HMM:NF013727.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015616 - DNA translocase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HSV21899.1"
                     /translation="NSASILTGSHAARNWIGIFGAYLSDIILQFWGVGSFLLPIFMSM
                     LGMRWFRSRAVQTPIAKTLGGIWMLMFVPALLAILPVHFRWMGAIPIEGLVGRIVGDV
                     LIRYLNVAGAYIVCTTVLAVALYLTTAFSFSAIEVWAPTRFAFILALRDRFRDWQDER
                     ERRRQQKELEKRRAEKPNVTAQLVPARPDAARYESAAAAHTGLGRTGIQRMAEEDDSA
                     FAPLPQTSQAASGNEVKVKVNDRGDTEHKARTTLPKIAGSYKLPPSSLLHRPDEQQSV
                     HEEELKLIAQVLTAKYAEFEVHGQVTQINPGPVVTTFEFKPEAGIKYSRIISLTDDLC
                     LALRAESILVERMPGKSTVGIQVPNREREIIWLRENIESQEFLGTKSKLTIAMGKDIN
                     GRIAAADLAGMPHLLIAGSTGTGKSVAINAMIMSILYKSTPDEVRLVLVDPKRLELGN
                     YEGVPHLYTPIITEPKLAANALRNAVREMERRLKLLAAKGVRNIDSYNRLFDDTPSLF
                     SEQSSDEGPLPKIVIIIDELADLMMLDGNNVEESITRLAQMARAVGIHLVLATQRPSV
                     DVITGLIKANFPARVSFRVATKVDSRTILDANGAESLLGRGDMLYLPAGSARVHRLHA
                     PYVTEKEIAGVVEFWKAQGQAQYQEKFLETPKEDRESSAADGDSGEVSAGDNDNDNDN
                     DPLFNDAVRLVIEFGKASTSLLQRRLRIGYGRAAHLIDLMERDGIVGAADGPKPREVL
                     KRPDWISEIEESMR"
BASE COUNT          419 a          637 c          805 g          505 t
ORIGIN      
        1 ggccaaccgc ctaagtttcg actcgaaagt tgctgcggcc gctggcggat ggcgagcttt
       61 gctcggcttg gacgggcgag ggcgcccgtc cctacacgac cttagcgcat cgactcttcg
      121 atttcggaga tccagtcagg ccgcttcagc acttcgcggg gtttggggcc gtcggcggcg
      181 cctacgatgc cgtcgcgttc catgaggtcg atgaggtgcg cggcgcgtcc gtagccgatg
      241 cgcaggcggc gctgcagcag ggaagtggag gctttgccga actcaatcac gaggcgaacg
      301 gcatcgttga agagcggatc gttatcattg tcattatcat tgtcgccggc ggaaacttct
      361 ccggaatcgc cgtcagcggc ggacgactcc cgatcttctt tcggcgtctc caggaatttc
      421 tcttgatatt gcgcctgtcc ctgcgccttc cagaattcca cgacgcctgc gatttccttt
      481 tcggttacat acggcgcatg gaggcggtgg acgcgcgcgg agccggcagg cagatagagc
      541 atgtcgccgc gtccgaggag cgattcggcg ccgttggcat caagaatcgt gcgcgagtcg
      601 actttagtcg cgacccggaa cgaaacgcgc gccgggaagt ttgccttgat caggccggtg
      661 attacatcga ccgatggccg ttgcgtcgcg agcacgaggt gaatgccgac ggcgcgggcc
      721 atttgcgcca gccgcgtgat ggactcttcc acgttgttgc cgtcgagcat catcagatca
      781 gccaactcgt cgatgatgat gacgattttg ggaaggggcc cttcatcgga ggattgctca
      841 ctgaacagac taggcgtgtc gtcaaacagc cggttgtagc tatcaatgtt gcggacgcct
      901 ttggcggcga gcagtttgag gcggcgctcc atttcgcgga cggcgttgcg cagagcgttc
      961 gcggcaagtt taggctcggt gatgatgggc gtgtagaggt gtgggacgcc ttcgtaattg
     1021 ccgagttcga ggcgcttcgg gtccacgagc acgagccgca cttcgtcggg tgtcgatttg
     1081 tagagaatcg acatgatcat ggcgttgatg gccacgctct tgcccgtgcc ggtcgagccg
     1141 gcgatcaaca ggtgcggcat gccggccaag tcggcggcgg cgatgcgtcc gttgatgtcc
     1201 ttgcccatgg cgatcgtgag tttcgacttg gtgccgagga attcctgcga ctcgatgttc
     1261 tcgcgcagcc agatgatttc gcgctcgcgg ttcggcacct ggatgccgac cgtgctcttg
     1321 ccgggcatgc gttcgacgag gatgctttcg gcgcgcaggg cgaggcagag atcgtcggtg
     1381 aggctgataa tgcggctgta cttgatgccg gcttcgggtt tgaattcgaa ggtggtcacg
     1441 actgggccgg gattgatctg agtgacctgg ccatggactt caaattccgc gtacttcgcg
     1501 gtcaggacct gggcgatgag tttgagttcc tcttcgtgga cggattgctg ctcgtcggga
     1561 cggtgcagca ggctcgaagg cgggagcttg taactgcccg caattttggg gagggtcgtc
     1621 cttgccttgt gctcggtgtc gccgcggtca ttgaccttga ctttgacttc gtttccagag
     1681 gcagcttgcg aagtctgtgg cagtggagcg aaagcggagt cgtcctcctc ggccatgcgt
     1741 tggatgccgg tgcggccgag gcccgtgtgc gcggctgcgg cggattcgta gcgagcggca
     1801 tcgggacgcg cgggcacgag ttgtgccgtt acgtttggct tttcagcgcg gcgcttttcg
     1861 agttctttct gttgacgcct gcgctcacgc tcgtcctgcc agtctctaaa gcggtctctg
     1921 agcgccagga tgaaggcgaa gcgagtgggt gcccagactt caatcgccga gaacgagaag
     1981 gcggtggtga ggtagagcgc gacggccaaa acagttgtgc agacaatgta tgcaccggca
     2041 acattaaggt aacggattaa gacatcgccg acgatgcggc cgaccaggcc ttcgatgggg
     2101 atggcgccca tccagcgaaa atgcacgggc aggatggcga gcagcgcggg cacgaacatg
     2161 agcatccaga ttccgcctag cgtcttcgcg attggagtct gcacggctcg cgagcgaaac
     2221 cagcgcatac cgagcatgga catgaagatg ggcagcaaga atgatccgac tccccagaat
     2281 tgcaggatga tgtcggaaag ataggctccg aagatgccga tccagttgcg ggcggcgtgc
     2341 gatccggtga ggatggaggc gctgtt
//
LOCUS       DATILV010000120        10446 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4882320, whole genome shotgun sequence.
ACCESSION   DATILV010000120 DATILV010000000
VERSION     DATILV010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10446)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10446)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10446
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4882320"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..276
                     /locus_tag="VLJ17_02610"
     CDS             <1..276
                     /locus_tag="VLJ17_02610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21900.1"
                     /translation="VTSPLRLFTRQKVTYGCLGRNAGAHLVARPQRTPFWATFVATFP
                     DQALDIQVLSEARIQFPKADFDFSAQLSECINSPQQFAAELLLCRFR"
     gene            complement(682..1470)
                     /locus_tag="VLJ17_02615"
     CDS             complement(682..1470)
                     /locus_tag="VLJ17_02615"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV21901.1"
                     /translation="MTNTMHRLAWSTARLLPIVALIVAWEIFARSGAVTPFMLPAPSA
                     VAERIYDDALDGDLFINIAVTLYRALIGFAIATVGGVVLGTAMARNTAARWFFDPIIS
                     VGFPMPKIAFLPVIILWLGLYDVSKITMVVLDAIFPVVTATIAGIAGVEKELLWSARN
                     MGAKDREMLWQILLPAALPQILTGLQVALPIALIVVVVTEMQMGGYGLGGAMMQASRF
                     ANSRGVFAGIVEIAVIGYALVAAMAVLRRRLLAWHQEAQEGAGV"
     gene            complement(1467..2240)
                     /locus_tag="VLJ17_02620"
     CDS             complement(1467..2240)
                     /locus_tag="VLJ17_02620"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV21902.1"
                     /translation="MSDGLAPKAAASNALVRYAPLLFLALAWEAASRLHLVSSLALPP
                     LTDVAQAWVELVQSGELVTNGLSSLYRAEAGLALAIVVGGALGIFMASSRLANAMLGP
                     LVELFYPMPKSALIPVTVLWLGFGDGSKILLIFLGCMLPVTIGAYNGARGSDRHLIWS
                     ARSMGAHRLRMIWDVVVPSALPEFLNGVRTALALSFILLVSSELIVSRQGFGYLIGYL
                     GANGSYEAMFAVVLTVAFTGFLADRVFQFVVMVLLRWRE"
     gene            complement(2237..3031)
                     /locus_tag="VLJ17_02625"
     CDS             complement(2237..3031)
                     /locus_tag="VLJ17_02625"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV21903.1"
                     /translation="MSDAAQIIVEDVCHHYRPSVGREVLALENVSLEVREREFLALLG
                     PSGCGKSTLLYLIGGFLPIESGKVLVDGKPVAGPGPDRGIVFQNFALFPWKTVRKNVL
                     YGLERQPLRREEREKRAQAFIDLVGLTGFEESYPSQLSGGMKQRAAIARTLAFDPRML
                     LMDEPFGALDAQTRSLMQSELLAIWEKTRKTVIFVTHDVHEAVFLAERVAVMSARPGR
                     IKTIVDTRFDKADPEIHRTKMFVDKVDEVWNLVREEAIKALEKRLS"
     gene            complement(3068..4009)
                     /locus_tag="VLJ17_02630"
     CDS             complement(3068..4009)
                     /locus_tag="VLJ17_02630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016737045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HSV21904.1"
                     /translation="MKPVVLSLGVFPQATMSTLAELFELHHFTVYPLPEGTLSSELEG
                     RIVAIATEANRGATRALITALPKLEIISCFGVGVDGIDLAAARERAIPVTNTPGILAD
                     ECADLAIGMMLASARQIVFADRYVRSGEWLKGPIRLGHSVGGKTIGIVGLGGIGRAIA
                     DRAHAFRMKVLWHGPRPKPHAPYEYVTDLIELARRSDFLMVACKGGEATRNLISAPVI
                     DALGPEGTLINIARGTVVDEPAMIERLRDGRLGFAALDVFLNSPRIAADFLELPNVLL
                     QPHHGSATIETRTAMGQLMIDNLTAHFAGRKLPTPVT"
     gene            complement(4048..5232)
                     /locus_tag="VLJ17_02635"
     CDS             complement(4048..5232)
                     /locus_tag="VLJ17_02635"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HSV21905.1"
                     /translation="MNERLLNPVSNAELDRRWAAVRNAMADRGVDALIVQSNNDWLGG
                     YSKWLTDHPATNGYPKTVVFHASDWMTVVDMGPRGGRRRLGGNDEVHRGVGEILTTPA
                     FTSVAYTDEYQAELVVSDIKSRNYGAIGVAGGGALPHKFIARIERELAPARFIDMTEA
                     IDGLKAIKSPEEIVAIRKAAHMQDEIFARLLTKVKPGMRDTDITALAQYEGRLLGSEQ
                     GLFLGTSAPLGVRSGFADRYQQGRTLKPGEHFTILIENNGPGGFYTELARTMVFGKAS
                     QQLLDGFAAMKAAQDHTLSLIKPGASCRDIAAAHDAYMHSNNFPPELRLYCHGQGYDL
                     VERPLVRSDETMTLAAGMNLAVHPGYETDALFAVVCDNYLVETNGPSECLHKTEKKIF
                     EI"
     gene            complement(5269..6285)
                     /locus_tag="VLJ17_02640"
     CDS             complement(5269..6285)
                     /locus_tag="VLJ17_02640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase"
                     /protein_id="HSV21906.1"
                     /translation="MPAPPILVTGAAGFVGFHVARLLLADGRDVVGIDNLNTYYDPKL
                     KEARLAELAHHKTFRFRKLDLSHRDGMASLFAEHRFAQVVHLAAQAGVRHSLSAPHDY
                     IDSNIYGFLNVLEGCRRVQTRHLLYASSSSVYGANTKLPFSVMQNVDHPLSLYGASKK
                     SNELMAHAYSHLFDLPVTGLRFFTVYGPWGRPDMAMWLFAAAILKDQPIKLFNGGDMR
                     RDFTYVDDVAISVVKLIDHVAQGNSAWSGDNPDPATSRAPWRVYNIGNHTPVDLVEVV
                     RLLETALGKKAIRELMPMQPGDVRETCADVEDLRKAVGFCPNTPIAVGIGKFVDWFRA
                     FHGV"
     gene            6569..7732
                     /locus_tag="VLJ17_02645"
     CDS             6569..7732
                     /locus_tag="VLJ17_02645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HSV21907.1"
                     /translation="MLEVRRPSRMDARPAPRLIYVVTEDWYFLSHRLPMARAAREAGF
                     EVHVATNIGEDGANIRGEGFILHPVRFARGRLSPFRTLRTILALRRLYRVVDPVIVHH
                     VAMQPTLLGIIASFGYRFAIVYAITGLGHAFVANSGKARSLRRWFRWLLRFGLNRRRA
                     VGLVQNPDDREVLAKLGVKPERIALIPGSGIDADQFRPIPEPDGPVTVAFVGRMLADK
                     GVRSLVEAQRILRASNIPCDLLLAGAPDPANPTSISQIEVAGWGRESGVTWLGHVDDI
                     ATIWRRAHIAVLPSRGGEGVPKSLLEAAAFGRPLIATDVPGCREIVIHEKTGLLVPVD
                     DPPALAAAILRLVRSSQQRVRFGVAARRLVDERFAADLIGQAAVALYRRLLTS"
     gene            7749..8756
                     /locus_tag="VLJ17_02650"
     CDS             7749..8756
                     /locus_tag="VLJ17_02650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HSV21908.1"
                     /translation="MRWREFELIVTAALCSAVLILLLLPLFRRYALARPNSRSSHSAP
                     TPQGGGVAVILAAMVALGIDSAFVGLERVVPGDTLPLGAAVVLLTVLGAIDDIVPITP
                     LWRLAVQAIAVVLAVANMPAELRAIPIVPISVERVAEFVAGLWFVNLVNFMDGIDWIT
                     VVETVPCTASIFIFALLGAAPPPAGSVALALCGAMLGFAPFNRPVAKLFLGDVGSLPI
                     GLLLFWLLLQLAGSGHLAAAILLPLYYVADTTITLLLRIVRGERITEAHRTHFYQLAV
                     VRGFSVLTVVQSVFAVNIALAVLAALSIRISSVAFDLFALVVGSTLVATLLVIMGRGK
                     R"
     gene            8753..9667
                     /locus_tag="VLJ17_02655"
     CDS             8753..9667
                     /locus_tag="VLJ17_02655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015599162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSV21909.1"
                     /translation="MSRVLVTGASGFIGRALVPALLTAGYDVRAAVRRSPAPFLPPVE
                     VVAQHDLSADVDWRPLMADVDFIVHLAGIAHTGPGVSEARYDRVNHLATAALAAAARA
                     AVVKRVVFISTIRAQTGPRSDHVLTEAEVPRPTDPYGRSKLAAEIALARSGADFTVLR
                     PVLVYGHGVKGNLHALVRLAALPLPLPFGAFTNMRSVVSVNNLVAAIAHVLHHAASGG
                     ETYVVADPQPVSLADMVTALRAGLGKAPRLFTVPTGLIRLGLAILGRSHNWDQLDGQL
                     VVDPNKLIATGWRPNLDTTAALAAMAGD"
     gene            complement(9675..>10446)
                     /locus_tag="VLJ17_02660"
     CDS             complement(9675..>10446)
                     /locus_tag="VLJ17_02660"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV21910.1"
                     /translation="TDLRYQPPSAPLTAYLSIAHRLSLTRFVFVQPSAYGLDNACMLD
                     AMAEVDPAVRRGIVHLDETHAKDADLARWHDHGVRGIRINISPIRKPEAGLADVLRPK
                     ITRTAHICRELGWHVDLLLPGWLVSELMRTLHELPVAFSVAHMGLFPAADGPSQQGFR
                     DLLALANDGSKRCWVKLTGIYRFSQAPEYADVKPFAAALIATVPDQLIWGSDFPHLSF
                     HEKVGTIELYNKLADWAPDVAVRQRILVDNPARLFGFG"
BASE COUNT         1946 a         3260 c         3226 g         2014 t
ORIGIN      
        1 gtgacctcgc cgctgcgatt gttcacgcga caaaaagtga catacggatg cctgggacgg
       61 aacgcaggtg cccacctcgt cgcgcgcccg caacgcacgc ccttttgggc cacattcgtg
      121 gcaaccttcc cggatcaagc cctcgatatc caggtcctct ctgaggcccg catccagttc
      181 ccgaaggccg atttcgattt cagcgcgcaa ctcagcgagt gcatcaattc gcctcagcaa
      241 ttcgcggcgg agttgctcct gtgccgcttc cgatagattc gcggctttga tgttgccaat
      301 tcgagcgtct agccatgccg cccctcaggc aggccggtaa cgattgaaaa cagccttgat
      361 cgtctattgc gaaattttcc cttgctgcac gtcttcggcg ctgcgcgata gcgcctgatc
      421 gatttcgttc cagtaggcat tcatctcatc atcggacacg ccctcgctgc gcagagcccg
      481 ctcaaaacct tcacgcccac tcctcgtcac tcatgatgta gctggccttc gcgtcgcgct
      541 tcgatttcgc gtgcggtccc tgcaagctcc tcctgcccct catgcgggct acgcacgttt
      601 tctagcagtg cgtgtgtcag ctgctttgtc atacctaaac gatacacatt gaaggaatgt
      661 gcatggcaaa gcttttttaa ttcagacccc tgccccctct tgcgcctcct ggtgccacgc
      721 caacaaccgc cgacgcagca ccgccatcgc ggccacgagc gcgtatccga tgaccgcgat
      781 ctcgacgatg ccggcgaata cgccgcgcga gttggcgaag cgggaggcct gcatcatggc
      841 gccgccgagg ccgtagccgc ccatctgcat ttcggtcacc accaccacga tcagggcgat
      901 cggcagggcg acttgcagcc cagtgaggat ttgcggcagc gcggccggca gcagaatttg
      961 ccacagcatc tcgcgatcct tggcgcccat gttgcgggct gaccacagga gctccttctc
     1021 gacgcccgcg atgcccgcga tggtggcggt caccaccgga aaaatggcgt ccagcaccac
     1081 catggtgatc ttcgacacat catagaggcc gagccagagg atgatcaccg gcaggaacgc
     1141 aatcttgggc atcgggaagc cgaccgaaat aatcggatcg aaaaaccacc gcgctgccgt
     1201 gttgcgcgcc atagcggtgc ccagcacgac gccgccgacc gtcgcaatgg cgaagcctat
     1261 gagcgcgcga tagagcgtca ccgcgatatt gatgaagaga tcgccgtcga gcgcatcgtc
     1321 gtagatacgc tcggctacag cgctcggcgc cggcaacatg aacggcgtga ctgccccgct
     1381 gcgagcaaag atttcccaag ccacaatcag cgcaacgatg ggcaaaaggc gggccgtgct
     1441 ccaggcaaga cggtgcatgg tgttcgtcat tcccgccatc gcagcagcac catcaccacg
     1501 aactgaaaaa cgcggtcggc caggaagccg gtgaacgcca ccgtcagtac caccgcgaac
     1561 atcgcctcgt aggagccatt ggcaccgagg tacccgatca gatagccgaa gccctggcgc
     1621 gacacgatca actccgaact caccaacagg atgaatgaaa gggccagggc ggtgcgaacg
     1681 ccattgagaa attccggcaa cgcgctcggc acaaccacgt cccaaatcat gcgcaaccga
     1741 tgggcgccca tgctgcgggc ggaccatatg aggtgcctat cgctgccgcg cgcgccgtta
     1801 taagccccga tggtgacggg cagcatgcag ccgagaaaga tcaacaggat tttcgagcca
     1861 tcgccgaagc ccagccacaa caccgtgacc ggaattaggg ccgatttcgg catcggatag
     1921 aacagctcga ccagcggccc aagcatggca ttcgcgagtc gcgagcttgc catgaagatg
     1981 ccgagcgcgc caccgacaac gatcgcaagc gcaaggccag cctcggcacg atagagcgag
     2041 gacaatccgt tggtgacaag ctcacccgat tggacgagtt cgacccatgc ttgcgcgacg
     2101 tcggtgagcg gcggtagcgc cagcgacgaa acgagatgca gccgcgatgc ggcctcccaa
     2161 gccaacgcca ggaacaggag cggcgcatag cgaacgaggg cattagaagc ggcagccttg
     2221 ggagccagcc catcgctcat gacagccgtt tctccaaagc cttgatggcc tcctcgcgga
     2281 ccaggttcca gacctcgtcg accttgtcta cgaacatctt ggtgcggtga atctccgggt
     2341 cggccttgtc gaaccgcgta tccacgatgg ttttgatccg tccggggcgc gccgacatca
     2401 cggcgacccg ctcggcgaga aagaccgcct cgtgcacgtc gtgggtgacg aagatcacgg
     2461 ttttgcgggt cttctcccaa atggcgagca gttcgctctg catcaggctg cgggtctgcg
     2521 cgtcgagcgc gccgaatggt tcgtccatca agagcatgcg ggggtcgaag gcaagcgtgc
     2581 gggcaatggc ggcgcgctgt ttcatgccgc ccgaaagctg cgacggatag ctctcctcga
     2641 acccagtcag gccgaccaga tcgatgaaag cctgcgcccg cttttcgcgc tcctcgcgcc
     2701 gcagcggctg gcgttccagg ccataaagca cgttcttgcg caccgtcttc cacgggaaca
     2761 gcgcgaaatt ctggaacacg atgccgcggt ccggccccgg cccggccacc ggtttgccgt
     2821 cgaccaggac ctttccgctt tcgattggca gaaatccgcc gatgagatag agcaaggttg
     2881 acttgccgca cccggaaggg cccagcaaag cgaggaactc gcgctcccgc acttcgagcg
     2941 acacgttttc gagcgccagc acctcccggc caaccgacgg gcggtaatgg tgacagacgt
     3001 cttcgacaat gatctgagcc gcatcgctca tagaaatcct tcgcgcaccg cgccagcgaa
     3061 cctcatgtca cgtcaccggt gtcggaagct ttcgaccggc gaaatgcgcc gtcaagttgt
     3121 caatcatcaa ttggcccatc gcggtgcggg tctcgatcgt cgcgctgcca tggtgcggct
     3181 gcaggaggac attgggcagt tcgaggaaat ccgccgcgat gcgcggagaa ttcaggaaca
     3241 cgtcaagcgc cgcaaagccg agccgtccgt cacgcaggcg ctcgatcata gcgggctcgt
     3301 ccaccacggt gccgcgcgcg atattgatta gggtcccctc gggaccaagc gcgtcgatca
     3361 ccggtgccga gatgagattt cgcgtcgcct ctccgccctt gcacgccacc atcaggaaat
     3421 cgctgcgacg cgccagttcg atgaggtccg tcacatattc gtagggcgca tgcggcttcg
     3481 gtcgcggccc atgccacaac accttcatac ggaacgcgtg ggcgcgatcc gcgatggcgc
     3541 ggccgatgcc gccgagcccc actatgccga tcgtcttgcc gccgacgctg tggccgagcc
     3601 ggatcggccc cttgagccat tcgccactgc gcacataacg atcagcaaat acgatctgcc
     3661 gtgccgaggc cagcatcatg ccgatggcga gatcggcgca ttcgtccgcc aggatgcccg
     3721 gcgtgttagt gacggggatt gcgcgctcgc gggccgccgc aagatcgatc ccatcgacgc
     3781 ccacgccaaa gcacgaaatg atttcaagct tcggcagcgc agtgatgagc gcccgggtgg
     3841 cgccgcgatt ggcctcggtg gcgatagcca cgatgcgtcc ctcgagctcg gagctgagcg
     3901 ttccctccgg cagcgggtag acggtgaagt ggtgaagctc gaatagctcc gcaagcgtgc
     3961 tcatggtagc ctgtggaaac acgccgagcg acagaacgac gggcttcatg aggactccgc
     4021 gatttgggtt ggtttgaacg gacgctatca aatctcgaag atcttttttt cggtcttatg
     4081 taggcattcg ctcggcccat tcgtttcgac aagatagttg tcgcagacca ccgcgaacaa
     4141 ggcatccgtc tcgtaacccg gatgcacggc tagattcatg cccgccgcaa gcgtcatggt
     4201 ttcgtcagat cgcaccagcg gccgttcgac caaatcgtat ccctggccgt ggcaatagag
     4261 gcgcagctcc ggtgggaaat tattgctatg catgtatgca tcatgggcgg ccgcgatatc
     4321 gcggcacgac gcgccgggct tgatcaagga caaagtatgg tcctgcgcgg ccttcatagc
     4381 ggcgaacccg tcgagaagtt gctgcgacgc cttgccgaac accatggtgc gggccagctc
     4441 ggtatagaag ccgcccggac cgttgttctc gatcagtatg gtgaaatgct cgccgggctt
     4501 aagggtgcgc ccctgctgat aacggtccgc aaatccagaa cgtacgccca gcggtgccga
     4561 cgtgccgaga aacaacccct gctcgctgcc gagcaggcgg ccctcatatt gggctagggc
     4621 cgtgatatcg gtgtcgcgca tgccgggctt caccttggtg agcagccgag cgaagatttc
     4681 gtcctgcatg tgcgccgcct tgcggatggc gacgatttcc tccgggctct tgatagcctt
     4741 gagcccgtcg atggcttccg tcatgtcgat gaaccgcgcc ggcgccaatt ccctctcgat
     4801 tcgggcaatg aatttgtgcg ggagcgcacc accgccggcg acgccgatcg ccccataatt
     4861 ccgcgacttg atatccgaca ccaccagctc ggcctggtat tcgtccgtgt aggctaccga
     4921 ggtgaacgcc ggcgtggtga ggatctcccc gactccgcga tggacctcgt cgttaccacc
     4981 gagccttcga cggccgccgc gcggccccat gtcgacgacc gtcatccagt cacttgcgtg
     5041 aaataccacg gtctttggat aaccattagt agcaggatga tcagtcaacc acttggaata
     5101 gccacccaac cagtcgttgt tactttgcac gataagcgca tcgacaccgc ggtccgccat
     5161 cgcgttgcgc acggccgccc aacggcggtc aagctcggca ttcgacaccg gattgagcag
     5221 tctttcgttc atttagcgca gtcctcgttc ggatcgcgac cgggccgctc aaacaccgtg
     5281 gaaggcgcga aaccaatcga cgaacttccc gatgccgacg gcaattggcg tattggggca
     5341 aaatcctact gctttgcgca agtcctccac gtccgcgcag gtctcgcgta cgtcgcctgg
     5401 ctgcatcggc atcagctccc ggatcgcctt cttgccgagc gcggtttcaa gcaggcgcac
     5461 cacctctacg agatcgacgg gggtgtgatt gccgatgtta tagacgcgcc acggcgcgcg
     5521 gctcgtcgcc ggatccgggt tgtcgcctga ccacgcggaa tttccctgcg ccacatgatc
     5581 gatgagcttg acgacggaaa tcgcgacgtc gtccacgtag gtgaaatcgc gtcgcatgtc
     5641 gccgccattg aacagcttta tcggttggtc cttgagaatc gctgccgcaa acagccacat
     5701 cgccatgtcg ggccggcccc atggcccata cacggtgaaa aagcgcaagc cggtgaccgg
     5761 caggtcaaac agatgcgaat aggcgtgcgc catcagttca tttgactttt tggacgcgcc
     5821 atagaggctg agcggatggt cgacattctg catcacgctg aacggcagct tggtgttggc
     5881 gccataaacc gaggaggagg acgcatagag gagatggcgg gtctgcaccc gccggcagcc
     5941 ctccagcacg ttcaggaagc cgtagatgtt ggaatcgatg tagtcgtgag gagctgacaa
     6001 cgaatggcgt acacccgctt gggcggcaag gtggaccact tgggcaaaac ggtgctcagc
     6061 gaataaggac gccatgccgt cgcggtggct gaggtcgagc ttgcggaacc ggaacgtctt
     6121 atgatgcgcg agttctgcga gccgcgcctc cttgagcttg ggatcgtagt acgtattgag
     6181 gttgtcgatt ccgacgacgt cgcgaccgtc cgccagcagc agtcgcgcca catggaagcc
     6241 aacaaatccg gcagcgccag tgaccaaaat cggcggagcc ggcatgcgat caaatcctta
     6301 tccttcgccc gcgcctgcgt cattccgggt gcgggcgagc gcgcgcccgg attccataac
     6361 cacaagtgga gatgatgcat agggcatcgg gctaatgatt ccgggctggt gggcaagaat
     6421 gacgaatagg cgttcggctc agcgcactag gacgttctcg gccccaacgt caagtctgtt
     6481 gcacggaaca cgatcgatgc tatcgatttc gtgccggcgc cgcgcagcgg aaacgcccgg
     6541 aaccagcgag gggccaacgg ggcacgatat gctagaggtc aggcggccat caagaatgga
     6601 tgcgcgcccg gcgccgcgcc taatttacgt cgtgaccgag gattggtact ttctgtcaca
     6661 tcgcttgccg atggcacgcg ccgcccgcga agcaggcttc gaagttcacg tcgccacgaa
     6721 tattggggag gatggcgcaa atatccgcgg ggaaggtttc attcttcacc cggtacgttt
     6781 cgcgcgtgga cgtctgtcac cgttccggac cctgcgcacc atcctggcat tgcgcaggct
     6841 ctatcgtgtt gtcgatccgg tgatcgtcca ccacgtcgcc atgcagccaa ccttgttggg
     6901 gattattgcg tcgttcggtt acaggttcgc gattgtgtat gccattaccg ggctgggcca
     6961 tgctttcgtc gcgaattccg gcaaggcacg atcgttgcgc cgatggtttc gctggttgct
     7021 gcgcttcggt ttgaatcgcc gccgcgcggt cggattggtt cagaacccgg acgaccgcga
     7081 agtgctcgct aaacttgggg tcaagccgga acgtatcgca ctgatcccgg ggtccggtat
     7141 cgatgcggac cagtttcggc caatcccgga accggatggc ccggtgacgg tggctttcgt
     7201 tgggcggatg ctcgccgaca agggcgtgcg cagtttagta gaggcgcagc gaatattgcg
     7261 ggcctccaat atcccatgcg atctcctact cgccggtgct cccgacccgg cgaacccgac
     7321 cagcatttcg cagatcgagg ttgccgggtg gggccgcgaa tcgggagtta cttggctcgg
     7381 gcatgttgac gacatcgcca cgatctggcg gcgtgcccat atcgcggtat tgccgtcccg
     7441 tggcggcgaa ggcgtgccca aaagtctgct tgaagcggcg gccttcggcc gccccctgat
     7501 tgccaccgac gttccgggat gccgtgaaat cgtgatccac gaaaaaaccg gattgctggt
     7561 gccggtcgac gatccgcccg cgctagctgc cgcaatcctg cggcttgtgc gttcgtcgca
     7621 acagcgtgtg cgattcggtg tcgcggcgcg gcgcctggtc gatgagcgct tcgccgccga
     7681 cctcatcgga caggcggcgg ttgcactcta tcggcgcctt ttgacctctt gatgctgggc
     7741 ggtccgtgat gaggtggcga gaattcgagc tgatcgtcac ggcggcgctt tgcagcgccg
     7801 tgctgatctt gctgctgctg ccgctgttcc ggcgctatgc tttggcacgg ccgaattcgc
     7861 gctcctcgca tagcgcgccc actcctcaag gcggtggtgt cgccgtcatt ctggccgcca
     7921 tggttgcgct cggcatcgac agcgcgttcg tcggattgga gcgggtggtg cccggcgaca
     7981 cgctgccact gggcgcggcc gtcgttttgc tgacggtctt gggcgctatc gacgacatcg
     8041 tcccgattac gccgctatgg cgcctcgccg tgcaagcgat tgctgtagtt ctggcagttg
     8101 cgaacatgcc ggcggaactg cgtgcgatcc cgatcgtgcc gatttcggtc gagcgcgtcg
     8161 ccgagtttgt cgccgggctg tggttcgtca atctggtcaa ctttatggac ggcatagact
     8221 ggatcacggt cgtcgaaacg gtgccgtgta cggcaagcat cttcatcttc gcgctgctcg
     8281 gcgccgcgcc gccgccggcc ggatcggtgg cgctcgcgct atgcggcgcc atgctgggct
     8341 ttgctccatt taatcgaccg gttgctaagc tgttcctcgg tgatgtcggc agtctaccga
     8401 tcggcttgct gctgttctgg ctgctactgc agttggccgg cagcgggcat ctggcggcag
     8461 cgattcttct gccgctctat tacgtggccg ataccaccat tacgttgctg ctacgcatcg
     8521 tgcgtggcga acgcatcacc gaggctcatc gcactcattt ttatcagctt gccgtggtcc
     8581 gaggattttc cgtgctgacc gtagtgcaat cggtattcgc cgtgaacatc gcgcttgcgg
     8641 tgcttgcagc gctgtcgata cgtatttcgt cggtggcgtt cgatctgttc gcactcgtgg
     8701 ttggcagcac tttggtggcg actttgttgg ttataatggg gcgaggcaaa cggtgagccg
     8761 ggttctcgtc accggggcat cgggtttcat cggccgtgcc ctcgtgccgg cgctcttgac
     8821 cgcaggctac gacgtgcggg cggcagtccg ccgctcgccg gcaccgtttt tgccgccggt
     8881 agaggtcgtg gcccaacacg acctcagcgc ggatgttgac tggcggccgc tgatggccga
     8941 cgtggatttt atcgttcact tagccggtat cgcacacacc gggcccggcg tctcggaagc
     9001 gcgttacgac cgcgtcaatc acttggcgac ggcggcgctt gccgcagccg cgcgggccgc
     9061 cgtggtcaag cgcgtggtct ttatatcgac catcagggcg cagaccgggc cgcgatcgga
     9121 tcacgtcttg accgaggccg aagtgccgcg gcccaccgac ccctacgggc gctccaagct
     9181 tgcggccgag atcgcgttgg cgcggtcggg tgcagatttt accgtgctgc gccccgtcct
     9241 ggtgtacggt cacggggtga agggcaatct ccatgcgttg gtgcggttgg cggccctgcc
     9301 attgcctctg ccattcgggg catttaccaa catgcgctca gtggtgagcg tgaacaatct
     9361 ggtggctgcg atcgcccatg tgctccatca tgctgcgagc ggcggcgaaa cctacgtggt
     9421 ggcggatccg cagccggtat cgcttgccga tatggtgacg gcgctgcggg ccggcctggg
     9481 taaggcgccc cggctgttca cagtgccgac ggggctgatc cgtctcggcc tcgcgatcct
     9541 cggtcgcagc cacaactggg accaactcga cgggcaactg gtcgtcgatc cgaataagct
     9601 gattgccaca ggatggcgcc caaacttgga cacaacggct gcgctcgccg ccatggcggg
     9661 cgattgagag cctctcagcc gaagccgaac aaccgcgctg gattgtcgac gaggatccgc
     9721 tgtcgaacgg ccacgtcggg cgcccaatcc gccagcttgt tgtaaagctc gatggtgccg
     9781 accttttcgt ggaaggaaag gtgggggaaa tcgctacccc agatcagttg atcaggcacg
     9841 gtcgcaatca gtgccgcggc gaacggcttg acgtcagcat attcgggagc ttgcgagaac
     9901 cggtagatgc cggtgagctt cacccagcat cgcttcgaac catcatttgc cagcgccagc
     9961 aggtcgcgga agccctgctg cgacggcccg tctgcggccg ggaacaaccc catatgggca
    10021 accgagaacg caaccggcag ttcgtgcagc gtccgcatca actcgctgac tagccagccc
    10081 ggcaagagca ggtcgacgtg ccagccaagc tcgcggcaaa tatgcgccgt gcgcgtgatt
    10141 ttgggccgca gtacatcggc aagccccgcc tccggcttgc ggatcggtga gatgttgatc
    10201 cggatgccgc gcacgccatg gtcatgccag cgagcaagat cggcgtcctt tgcgtgcgtc
    10261 tcatcaagat gcacgatgcc gcgtcgcacg gcagggtcga cttccgccat ggcgtccaac
    10321 atgcaggcgt tgtcgagacc gtatgcgctc ggttgcacga atacaaagcg ggtcaagctg
    10381 aggcggtgcg caattgacag atacgcggtg agtggcgcag agggcggctg gtagcgtagg
    10441 tcggtg
//
LOCUS       DATILV010000121         9297 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4882661, whole genome shotgun sequence.
ACCESSION   DATILV010000121 DATILV010000000
VERSION     DATILV010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9297
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4882661"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..494)
                     /gene="nadA"
                     /locus_tag="VLJ17_02665"
     CDS             complement(<1..494)
                     /gene="nadA"
                     /locus_tag="VLJ17_02665"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020174202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008987 - quinolinate synthetase A
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HSV21911.1"
                     /translation="MLTETATPDLLARTAALYGRVKAVIPPIEWPFFARDIDAILDLK
                     RTRNAVILAHNYQTPEIFHCVADIVGDSLALARQATRVDADVIVLAGVHFMAETAKLL
                     NPRKTVLLPDTAAGCSLAASITPADVRLLRQRYPGVPIVTYVNTSAAVKAESDICCTS
                     GNAR"
     gene            complement(691..1623)
                     /locus_tag="VLJ17_02670"
     CDS             complement(691..1623)
                     /locus_tag="VLJ17_02670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008967922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21912.1"
                     /translation="MRGKANHNAVPIDLTAVIVAVTEEEPRVLTIQDSQALPTGPFKS
                     GHRTLQIGLRSWVERQTHHPLGYIEQLYTFADRDRTHDGAGERLVSISYLGLTREERT
                     SGARAPRWQSWYRFLPWEDWRSGQPAVVARVIAPRLRVWAKGADDGATRRERTSRIEV
                     AFGLSGRPWNEELTLQRYELLYEAGLVPEAKRHGPASPLPGAAMKHDHRRILATGIAR
                     LRAKIKYRPVVFELMPASFTLLALQRAVEALAGQRLHKQNFRRLIDQQGLVEDTGGIT
                     TQTGGRPAKLVRFRREVLLERAVVGTKLPLSRPV"
     gene            complement(1620..1862)
                     /locus_tag="VLJ17_02675"
     CDS             complement(1620..1862)
                     /locus_tag="VLJ17_02675"
                     /inference="COORDINATES: protein motif:HMM:NF024240.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSV21913.1"
                     /translation="MPKGIINLWVAGRCDSSDTKVHGSIRAQSAADMMGQAAAAGAVQ
                     SIRKGNRNLDTEQLVVTLRANGAYRPQRELSKVMTR"
     gene            2094..3014
                     /locus_tag="VLJ17_02680"
     CDS             2094..3014
                     /locus_tag="VLJ17_02680"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV21914.1"
                     /translation="MKLAVPDMISNSYFPAIAAAELGLFKQEGLDVEVELLFPVDKAY
                     VALRDGAVDFVGGSAHSALAAFREWQGVKLICAQAQGMYWFLVMHKDLGVKRGDVAGV
                     KGRSIGAAPWVEMGLRRLLIEAGIDLARDAVKIAPVPGALAAGVNFGVTAAKSLEERK
                     IDGFWANGMGAEVAVRRGIGTVVLDIRRGDGPNACFNYTMASIATTERLLTRTPEIAS
                     AAVRAVVKTQAALKNDVSLATSIGRKLFPSQEAELIAELIRRDLPYYDAKITPEFVAG
                     MNRFARDVGILAGEVPYERVVATQFAELWR"
     gene            complement(3074..3448)
                     /locus_tag="VLJ17_02685"
     CDS             complement(3074..3448)
                     /locus_tag="VLJ17_02685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006338109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DCC1-like thiol-disulfide oxidoreductase family
                     protein"
                     /protein_id="HSV21915.1"
                     /translation="MRSKLTVWYNTKCPVCNGGIKWQHRRLVRAAQAGAIEFRDINLE
                     PAALSRFGSGIEDVRRRLHGVAEGRLFIGADCAIEIWLRTPGDAWLAQLLGFPVARQI
                     ARFGYDRFADLLYTCNRRKGRW"
     gene            3592..4608
                     /locus_tag="VLJ17_02690"
     CDS             3592..4608
                     /locus_tag="VLJ17_02690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase family protein"
                     /protein_id="HSV21916.1"
                     /translation="MLPTCLVGSYPQPEWLIDRARLSKQVPRVRARDLWLIAPDKLEA
                     AQDDATLLAIRDQERAGIDIISDGEQRRESYSNHFATALDGVDIDNPGTAMSRMGRPI
                     QVPRITGPIRRRRQVEVRDVQLLRANTDRRIKATVPGPFTMSRQAQDDYYGDEEAMAI
                     DFADAVNREIKDLFAAGADVVQIDEPWMQQYPDKARAFGLKALNRALDGVSGTVAVHL
                     CFGYAAVVHDKPTGYSFLAELETSKAQQISIEAAQPRLDLKVLRNLPGKTIILGVIDL
                     ADLTIETPQTVADRIRAALPHVPPQRLVIAPDCGMKYLPRTVAYGKMKAMVDGARIVR
                     QELG"
     gene            4630..5505
                     /locus_tag="VLJ17_02695"
     CDS             4630..5505
                     /locus_tag="VLJ17_02695"
                     /inference="COORDINATES: protein motif:HMM:NF012976.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0018576 - catechol 1,2-dioxygenase
                     activity [Evidence IEA];
                     GO_process: GO:0009712 - catechol-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dioxygenase"
                     /protein_id="HSV21917.1"
                     /translation="MPYVTEQNLTDVVLERWKAIADPRLRQVMQSFIKHLHAFVRDIE
                     PSEAEWATAIDFLTRIGKKCDDKRQEFILFSDVMGVSMLVDALNHRLESGATPTTVEG
                     PFHVPDAPSFPDGGNMAAACPGIACFITGTVKGLDGRPVANAKLDLWQTDGEGLYEAQ
                     RDVTEPWMRGVFYSKADGSYAIRTVAPIGYSIPMDGPIGELVERTDISKMRPAHIHFC
                     IEAPGYRRVVTHLFQRDCPYLDTDVVYGVKAPLIVDFVENPPGAAPDGENIATTFYTI
                     RYDFVLQPEAEAAAA"
     gene            6055..6252
                     /locus_tag="VLJ17_02700"
     CDS             6055..6252
                     /locus_tag="VLJ17_02700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21918.1"
                     /translation="MTRKLNPPGASIGKAALMLALPIVPTLVATVLPAGVTLFTLTTA
                     MLMTAKDLVVMRWLDSGQFRG"
     gene            complement(6268..7044)
                     /locus_tag="VLJ17_02705"
     CDS             complement(6268..7044)
                     /locus_tag="VLJ17_02705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21919.1"
                     /translation="MSALSLDRYIDFRPELSRRDGPAPIYVVCSPNRQVGKTMLARLL
                     TEHYLADARPVAAFDLADEGPGLADFLNRHVTIPNINDMRGQVQFFDGLIESADVPKI
                     IDLSHREFANFFTIVDKIGLFEEARRRSIEPLILFLIDPSPVAANTYGLLRRRFSGTS
                     LLPVRNLTVAKGLRYGASFPHGSTLVVSLEMSVLGPAARALVERESFSFLELGERAWR
                     YPDVSARTRSELQAWFRRARFQFREMELSLMRERILTGLR"
     gene            complement(7081..7875)
                     /locus_tag="VLJ17_02710"
     CDS             complement(7081..7875)
                     /locus_tag="VLJ17_02710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21920.1"
                     /translation="MERPAVILVGADKGGVGKTTVSRTLLDYFASRKIATRAFDTEFP
                     KGTLKRFHPTITDVVDVTSVPDQMKIFDTVESSNAQVTLIDIRAGLMTPTLEALRDIG
                     FIDMTKRDELTFAVFHILGPSIASLDEIAETSKFLLDARYFLVKNFINNTTFFDWDER
                     TYNSYFNKIPHAVEVVVPKLSEMACEQVELSAVPFATFIADKKANGEPAGNSFVLRGY
                     VRHWLNNVFAEYDRVRLLDLLQAQDLASKLRGSAKITELSPQRANS"
     gene            complement(7977..>9297)
                     /locus_tag="VLJ17_02715"
     CDS             complement(7977..>9297)
                     /locus_tag="VLJ17_02715"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HSV21921.1"
                     /translation="SDWPTPELPCNISQMALEKILRGCAECMNAGNIHFGWRLESFHV
                     EDRGVRASILSTAGEQHQIRARYLLGIDGAASTVRRALGFNMLGEDGRQARAFMGGTM
                     LSWYVRVPTLIVASKRPPTHMTWIINSDLRAMMYAQDGRETWVVHYQVPRDIDWREVD
                     VTATLRAIFGADIPFELISGGPWTGGLALVAEHYQSGPVFLAGDSAHLFTPLGGLGMN
                     TGIGDVMNLGWKIAAVYQGWAGPHLLASYEIERRPIGERNIKLGVQCTRVMDRWTPPP
                     DAEDDTESGAAARKEFGLRIMADDRPQYLTVGIQLGERYEDSPLISRDGTPRPPDSWD
                     VYTPSDRPGGRAPHFEILPGRPAYDECGPGFTLFASPDGEPSELQAFSAAAAYRKVPL
                     KVVRRVAPTGLYAKKFALLRPDCHIAWRGDKVSDPIGLIDRARGSCT"
BASE COUNT         1849 a         2823 c         2824 g         1801 t
ORIGIN      
        1 ttcctcgcgt tgccggaggt gcagcagatg tccgattcgg cctttacggc tgccgacgta
       61 ttgacgtagg tcacgatcgg aacgcccgga tagcgctgac gtaacagccg cacatcggca
      121 ggcgtgatcg aggcggcgag cgagcagccg gcggcggtat ctgggagcag caccgtcttt
      181 ctcggattga gcaatttcgc cgtctcggcc atgaagtgca cgccggccag aacgatgacg
      241 tcggcgtcca cgcgcgtcgc ctggcgcgcg agcgccagac tgtcgccgac aatatccgcc
      301 acacagtgga agatctcggg cgtctggtag ttatgcgcaa ggatgaccgc gttgcgggtg
      361 cgcttgaggt caagaatcgc gtcgatgtcc cgggcgaaga aaggccactc gatcggcggg
      421 atgacggcct tgacacgtcc gtaaagcgcc gcggtacggg caagcaggtc aggcgtagcg
      481 gtctcggtaa gcatacggca cctttgtgct catttggagc attataagat ataaaacggt
      541 tacgcgctcg acaccaacgt attatgctaa atgtgagcaa aacggatcga tgtcaagctg
      601 gctacgtatg gcggtacgcc gctaagaggc tgcgaaacat ttacaacctc gtcctgtgag
      661 cgcaaagacc cggggttgta tgacacgccc tcagaccggg cgggagagcg gcagcttggt
      721 cccgacgaca gctctctcaa gcagcacctc gcgccggaac cggaccagct tggccggtcg
      781 accgccggtc tgcgtcgtaa tgcctccggt atcctcgacc agtccctgct gatcgatcag
      841 ccggcggaaa ttttgcttgt gtagccgctg tccggcaagg gcctcgacgg cgcgctgcag
      901 cgcaagcaat gtgaaactcg ctggcatcaa ctcgaaaacg acggggcggt atttgatttt
      961 ggccctcagc cgcgcgatcc cggttgccag gatgcggcga tgatcatgct tcatcgctgc
     1021 acccggtaac ggactcgctg gtccatgccg cttcgcctca ggcaccagac cggcttcgta
     1081 tagaagctca tagcgctgca gcgtcagctc ctcattccag gggcggccgg acaggccgaa
     1141 ggcgacctcg atgcggctcg tacgctcgcg tcgggtcgca ccgtcatcgg cacccttcgc
     1201 ccatacgcgc agccgcgggg caatgacccg cgcaacgact gccggctggc cggagcgcca
     1261 atcctcccag ggcaagaacc ggtaccagct ctgccagcgc ggagcgcgcg ctcccgatgt
     1321 gcgctcctcc cgggtcagcc cgagatagct gatcgacacc agacgctcgc cagctccgtc
     1381 gtgggtgcga tcgcggtccg cgaaggtata gagctgctcg atatagccca gcgggtgatg
     1441 ggtctgccgc tcgacccaag accgcagacc gatctggagt gtccgatgcc ccgacttgaa
     1501 cgggccggtg ggcagcgctt gcgagtcctg gatcgtgagg acgcgcggct cctcctcggt
     1561 gacagcgacg atcaccgcgg tcagatcgat cggcacggcg ttatgattgg ctttacctct
     1621 caccgagtca tcactttgct tagctcgcgt tgcggccgat acgcaccatt ggcgcgcaga
     1681 gtgacgacca gttgctcggt gtcaagatta cggttcccct tgcggatcga ttgcacggcc
     1741 ccggccgcag cggcctggcc catcatgtcg gcggccgatt gggcgcggat cgagccgtgc
     1801 accttggtgt cactcgaatc gcagcgccca gccacccata gattgataat tcccttcggc
     1861 accgatgcgc ccgacaaccc acagccacat caacgctgcg acaccgaacc ggcctgcctc
     1921 gcgtcgaatg cgtcccatac gagcgtcgcg cggtcccgcc ggctctccgg ccaggctgta
     1981 gaaactgctg gcggctcgtc atgcggcgtg gcaaatcgca tttggccgcg gcagatgccc
     2041 caacagtggt tatagattca ggggatgctg cgccgttatc gcgaggccaa gctatgaaac
     2101 tcgccgttcc cgatatgatt tcgaactcct acttcccggc aattgcagcc gcggaactcg
     2161 gattattcaa gcaggaagga ctggacgtcg aagtggagct tctgtttccg gtcgataagg
     2221 cctatgtggc gctgcgcgac ggcgcggtcg atttcgtcgg cggatcggct cattcggcgc
     2281 tggcggcgtt tcgggaatgg cagggcgtga agttgatctg cgcccaggcc caagggatgt
     2341 actggtttct ggtcatgcac aaggatctcg gcgtgaaacg cggcgacgtc gcgggcgtaa
     2401 agggccgcag catcggcgcc gccccatggg ttgaaatggg attgcgccgc ctactcatcg
     2461 aagctgggat cgatcttgca cgcgatgcag tgaagatcgc gccagtgccg ggcgcactgg
     2521 cagccggtgt caatttcggt gtcacggccg ccaaatctct ggaagaacgt aagatcgacg
     2581 gcttctgggc caacggcatg ggtgccgagg ttgcggtccg gcgcggcatc ggcacggtgg
     2641 tgctcgacat tcgccgaggc gacggcccga atgcttgctt taactacacc atggcgtcga
     2701 tcgccacgac cgagcgcttg ctcacccgca cgcccgagat tgcgtcggcg gccgtgcgcg
     2761 ccgtcgtcaa gacgcaagcc gcattgaaaa acgacgtgtc gctcgccacc agcatcgggc
     2821 gcaagctgtt tccatcgcaa gaggcggaat tgatcgccga attaatccgc cgcgatctgc
     2881 cctattacga tgcgaaaatc acgccggaat ttgtcgccgg catgaaccgc tttgcccgcg
     2941 acgtcgggat tctcgcaggt gaggtgccgt atgagcgcgt cgtagcgaca cagtttgcag
     3001 aattgtggcg gtgacgttgg gcgctgcgac cgatcgaatt tggcgttccg ttctgatcgc
     3061 cgaaatgaca acttcaccaa cggcctttgc ggcggttgca agtgtagaga aggtcggcga
     3121 agcgatcata cccaaaacga gcgatctggc gtgcgaccgg gaaaccaagc agctgagcga
     3181 gccatgcatc ccccggagtg cgcagccaga tctcgattgc gcagtctgcg cctatgaaga
     3241 gccgcccttc ggcgaccccg tgcagccggc ggcgcacgtc ctcgatcccg gaaccgaagc
     3301 gcgagagagc tgcgggttcc agattgatgt cacggaactc gatcgcgccg gcttgcgcgg
     3361 cccgcacaag tcgcctgtgc tgccacttga taccgccgtt acaaaccggg catttggtgt
     3421 tgtaccagac ggtgagctta gagcgcatcg acagagcttc ccaaccgggg ccccgtcaat
     3481 ctaacgcacg tcgcatgttt gatataacag aattcagttg gccttatgct ggcggttcac
     3541 gcctttcctt cctggcttcg gccggaagtc agcgcgacaa aggagaacct gatgctcccc
     3601 acttgtctgg tcggttccta cccgcaaccc gaatggctga tcgaccgggc gcgtctgtcg
     3661 aagcaggtac cgcgggtgcg ggcgcgcgat ctctggctga tcgcacccga caaacttgag
     3721 gccgcccagg acgacgccac tctgctagcg atccgcgacc aggaacgtgc cggcatcgac
     3781 atcatcagcg acggcgagca gcgccgcgaa agctactcca atcattttgc caccgccctc
     3841 gacggcgtcg acatcgacaa tcccggcacg gccatgagtc gcatgggccg gcccatccag
     3901 gtgccgcgca tcaccggtcc gatcaggcgg cgccgacagg tcgaggtgcg cgatgtgcaa
     3961 ttgctgcgcg ccaacacgga ccgccgcatc aaggcgacgg tgcccggccc cttcaccatg
     4021 agccgccagg cacaggacga ctattacggc gacgaggagg ccatggcgat agacttcgcc
     4081 gacgccgtca atcgcgagat caaggacctg ttcgccgccg gcgccgatgt ggtgcagatc
     4141 gacgagccat ggatgcaaca gtatcccgac aaggcccgcg ccttcggcct caaggcgctt
     4201 aatcgggcgc ttgacggcgt ttccggcacc gtggcggtgc acctgtgctt cggctatgcg
     4261 gccgtggttc acgacaagcc gaccggctac tcgttcctgg ccgagcttga aacctcaaag
     4321 gcccagcaga tctcgattga ggcggcgcaa ccacggcttg acctcaaagt cctgagaaac
     4381 ctgcccggca agaccatcat tctgggcgtg attgacctcg ccgatttgac catcgaaacg
     4441 ccacagaccg tggccgatcg cattcgcgcg gcgttgccac acgtgccgcc gcaacgcctc
     4501 gtcatcgcgc cggattgcgg catgaaatat ctgccccgca cggtggcata cggcaagatg
     4561 aaagccatgg tagacggcgc ccgaatcgtg cggcaagaat tgggctgaac agcctaaaga
     4621 gagcacccga tgccctatgt taccgaacag aacctgaccg atgtggttct cgaacgctgg
     4681 aaggcgattg cggaccctcg cctgcgccaa gtgatgcaat cattcatcaa gcatctgcac
     4741 gcgttcgtcc gcgacatcga gccgagcgag gccgagtggg cgaccgcgat cgattttctg
     4801 actcggatcg gcaagaaatg cgacgacaag cggcaggagt tcatcctgtt ctcggacgtc
     4861 atgggcgtga gcatgctggt cgatgccctc aatcaccgcc tggagagtgg tgccacgcct
     4921 acgaccgtcg aaggtccctt tcatgtcccc gacgcaccct ctttcccgga cggtggcaat
     4981 atggccgcgg cgtgccccgg cattgcgtgc ttcatcaccg gcaccgtgaa aggcctcgat
     5041 ggcaggccag tcgcgaatgc caagctcgac ctgtggcaga ccgacggcga gggcctttac
     5101 gaagcccagc gcgacgtgac cgagccgtgg atgcgcggcg tgttctactc caaggccgac
     5161 ggctcatacg cgatccgcac cgtcgcgccg atcggctact cgatcccgat ggacgggccg
     5221 atcggcgaac tcgtggagcg gaccgacatc tcgaaaatgc gcccggccca catccacttc
     5281 tgcatcgagg cacccggcta tcgccgcgtc gtcacgcatc tgtttcagcg cgactgcccc
     5341 tatctcgata ccgatgtcgt ctatggtgtg aaggcgccgc tgatcgtcga tttcgtcgaa
     5401 aacccgcccg gagcggcgcc ggacggcgag aacatcgcaa cgacgttcta cactatcagg
     5461 tatgactttg tgctgcagcc ggaggcggaa gcagcggctg catgagtttg tgctgcggtc
     5521 gccggcgggc caatcgcaga tgcggtactt cgtggtgcgc cctctggcac tgccgcctcg
     5581 ctttggctcg tatggactag atgattacga acgctcttgc atgcgttccg ccgttcattg
     5641 ccgcggtggt tagcggatac gaccttgcta ttgtggtatt gacggttgcg ttctatttgc
     5701 tgctcgcacc gtttgcgtat gtgggccggc ggacgattca tcagattcag caggcccaac
     5761 cggcaattgg cgaattgaga cgccgcttca agggcgatag gcgggagctc aatcgcgcgc
     5821 tcttggtgct gtatcgggat cgcggcatac ctccagcccg gttttgtttg gctggattcc
     5881 tatggttgcc caggtcctca tgggaattgt gctctatctt cacctactgt catagccaca
     5941 tggcgagatg gatcggatcg ttttatcatc ccgtggctcg acaacttatc aattgccgat
     6001 cggacctacg ttcttccgct gcttttaggc ttggttctcg ggctgaaatg gcacttgaca
     6061 cgcaagctca atcctcccgg agcaagcatc gggaaagcgg cattgatgct cgccctgccg
     6121 attgtaccga cgctcgtagc gacggtgctc cccgcggggg tcacgttgtt cacactgaca
     6181 accgctatgt tgatgaccgc caaggacctt gttgtgatgc gatggctgga ttccggccaa
     6241 ttccgaggct gagctcgctc cgcacgccta ccgcagcccc gttaaaatcc gctcgcgcat
     6301 caacgacagt tccatttcgc gaaactgaaa acgggcacgc cgaaaccagg cttggagttc
     6361 ggagcgcgtc cgggccgaca catcgggata acgccaagcc cgctcgccca attccaagaa
     6421 agaaaacgac tcgcgttcga cgagcgctct cgcggcaggc cccagcactg acatttcgag
     6481 tgaaaccaca agcgtgctgc catgcgggaa agaggcgccg tagcgtaagc ctttggcaac
     6541 cgtgagattg cgtaccggca gcagcgaggt tccggaaaag cggcggcgca gcaggccata
     6601 ggtgttcgcc gcgaccgggc tcggatcgat caggaacagg atcagcggtt cgatcgagcg
     6661 gcgccgcgcc tcttcaaaca gtccgatctt gtcgacgatc gtaaagaaat ttgcgaattc
     6721 ccgatggctc aaatcaatga ttttcggaac gtcggcggat tcgatcaaac cgtcgaaaaa
     6781 ctgtacctga ccgcgcatgt cgttgatgtt cggaatagtg acatgacggt tcaagaagtc
     6841 tgccaacccg ggcccttcgt cggcgagatc aaaagccgcg accgggcggg cgtccgccaa
     6901 gtaatgctcg gtgagaagcc gcgccaacat ggtcttgccc acctgtcggt tcggcgagca
     6961 caccacatag atcggcgctg gtccgtcccg gcgcgataac tccgggcgaa agtcgatgta
     7021 gcgatcgagg cttagggcac tcatgcacgg ccccatccga atccatgctg cgatgcggga
     7081 tcaggaattc gcgcgctgtg gcgacagctc cgtaatcttg gccgaaccgc gcaatttact
     7141 tgccaaatcc tgtgcctgca gaaggtcgag aagccgcacg cgatcgtatt cggcaaatac
     7201 gttgttgagc caatggcgga cgtagccgcg gagcacgaag gagtttccgg ccggttcgcc
     7261 attggccttc ttgtcagcaa tgaaggtggc gaatggcacg gccgaaagct caacctgctc
     7321 gcaggccatc tcgctgagct tggggacgac aacctcgacg gcatgaggaa tcttgttgaa
     7381 ataggaattg taggttctct catcccagtc gaagaaggtt gtattattta tgaaattttt
     7441 gaccagaaaa tagcgggcat caaggaggaa tttcgacgtt tctgcgatct cgtcaagcga
     7501 cgcgattgaa ggccccagga tgtgaaagac cgcgaaggtg agttcatcgc gcttcgtcat
     7561 atcgatgaag ccgatgtcac gtaacgcctc caatgtgggc gtcatcaggc ccgctcgaat
     7621 gtcgatcagc gtgacctgag cattggaaga ttcgacggta tcgaaaatct tcatttggtc
     7681 gggcaccgag gtgacgtcga ccacgtcagt gatggtcgga tggaaacgct taagcgttcc
     7741 tttcgggaat tcggtatcga aggcgcgggt ggcgattttt cgcgatgcga aatagtcgag
     7801 cagtgtgcgc gacaccgtcg tttttccgac cccgccctta tcggcgccaa ccaaaattac
     7861 cgctggtctt tccatgccac agactccccg tttggccgtc gtttttacgc tacatcgggt
     7921 cgcgagagga gcgaaataat ggcaaaatga aagcaaagat gtgaattatt atactttcag
     7981 gtgcagctcc cccgggcgcg atcaattaac cctatgggat cgctgacctt atcaccccgc
     8041 catgcaatat ggcaatctgg cctaagtagt gcaaattttt ttgcatagag ccccgtcgga
     8101 gcgacacggc ggacaacttt cagtggcact ttgcggtatg ctgctgccgc cgaaaacgcc
     8161 tgcaactcgg atggctcacc gtcagggctg gcgaacagtg tgaaacctgg cccgcattcg
     8221 tcgtaggcag gacgacccgg caaaatctcg aaatgcggcg cgcgtccgcc cggccggtcc
     8281 gaaggtgtgt agacgtccca ggagtcgggc gggcgcgggg tgccgtcgcg cgagatcagg
     8341 ggcgagtcct cgtaacgttc ccccaactga atgccgacgg tcaggtattg cggccggtcg
     8401 tctgccatga tgcgtaggcc gaattctttt cgcgccgcag caccagattc agtgtcgtcc
     8461 tcagcgtcgg ggggcggtgt ccaccgatcc atcacacggg tgcattggac tccaagcttg
     8521 atattgcgct cgccgatcgg gcgacgttcg atttcgtagc tcgcaaggag gtgtggcccg
     8581 gcccagcctt ggtagacagc cgcaatcttc cagccgaggt tcatgacatc gccgataccg
     8641 gtgttcatgc caaggccccc gaggggtgtg aacagatgcg ctgaatcgcc ggcgagaaac
     8701 actggcccag actgataatg ctcggccacc aaggcgagac ctccggtcca tgggccgccg
     8761 gaaatcaatt cgaaaggaat gtcggcaccg aatatcgccc gcaatgtcgc cgtgacatcg
     8821 acctcgcgcc aatcgatgtc tctagggact tggtaatgca cgacccaggt ctcgcggccg
     8881 tcctgggcat acatcattgc gcgcaggtcg gaattgatga tccaggtcat gtgtgtcggc
     8941 ggccgcttgc tggcgactat cagcgtagga acgcggacat accaggacag catggtacct
     9001 cccatgaacg cgcgcgcttg cctgccgtct tcgccgagca tgttgaatcc cagcgcacgg
     9061 cgcacagtgc tggcggcgcc atcgatgccc aggagatagc gcgccctgat ctggtgctgt
     9121 tcgccagccg tgctcaagat cgaagccctc actcctctgt cttcgacgtg aaaggactcc
     9181 agccgccagc caaaatgaat attgccggcg ttcatgcatt cggcgcagcc acgcaggatt
     9241 ttttctagcg ccatctggga gatgttgcag ggcagttccg gggtcggcca atcggac
//
LOCUS       DATILV010000122         4815 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3350572, whole genome shotgun sequence.
ACCESSION   DATILV010000122 DATILV010000000
VERSION     DATILV010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4815)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4815)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4815
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3350572"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..797
                     /locus_tag="VLJ17_02720"
     CDS             <1..797
                     /locus_tag="VLJ17_02720"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HSV21922.1"
                     /translation="DPSVAAFWQSWLALPFWPSGPPWFLWQLLVLNIAAAAVHKFAPR
                     WGKLLGRLASFGGAHPNRLFAGLVIASALAYVPLAIIFTPWEWLQLGPFALQLCRPLH
                     YAVYFFAGVGVGAHGIDNDLFASTGLLARRWAGWLAAAVAAFLLWIASTALTIELRDT
                     APLGLQIIADLGFVLSCASSSFFLIAMFVHFARNRSRILDSLSGNAYGIYLIHYVFVI
                     WLQYGLLNAPFFAVAKAAIVFVVTLVLSWAIMAALRQLPLRFGCAA"
     gene            838..1971
                     /locus_tag="VLJ17_02725"
     CDS             838..1971
                     /locus_tag="VLJ17_02725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008960575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV21923.1"
                     /translation="MSLIFRLSWRNLFHDRLRFVATIIGIVFSIVLVTVQMGLFLSFD
                     RMVTTMIDHAQADLWIVPLGTKCFEDPSLVDERERFRALSINGVTEALPIVIGFAQWR
                     LPSGGTTPVFIVSSDTRVGGLHPWNLVEGSLADLAVPGAVAIDQSYFDRLGTKGLGAN
                     AEIRDQKVEVMAVTKGIRAFTTTPYVFTSLDQARAFIGTPPNKATYFLVRLAPDADIA
                     SVRSRLRTILSESEVLTPSEFRRRSRSFWLFGTGAGAALFAGALLGIIVGTVVVAQTL
                     YSSTKDHLNEFATLRAMGSSARYIHKVIICQALLSAVIGFCIAAGIGLIIVDATAESA
                     LPVLMTPAMSVGLLLLTVAMCVLSSTSAIVQVMRIDPAVVFTR"
     gene            1968..2684
                     /locus_tag="VLJ17_02730"
     CDS             1968..2684
                     /locus_tag="VLJ17_02730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV21924.1"
                     /translation="MTEAVMEAVDVVKTLGRGPSQVQALRGVSLALAGGELTLLMGPS
                     GSGKTTLLSILGCILSPTSGIVRVCGQSTAHIQPEDMARLRRDHVGFIFQSYHLFPTL
                     TALDNVRLALDVRDEPSAAAIFKAKEALATVGLSHKMKSFPRALSGGEQQRVAIARAI
                     VGNPSAVLADEPTSALDGDNGQAIMKVLAQIAKEQSCGVLVVTHDPRIFRFASRIVRI
                     EDGRIVGEERAAQDSIEKRG"
     gene            2696..3712
                     /locus_tag="VLJ17_02735"
     CDS             2696..3712
                     /locus_tag="VLJ17_02735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006613691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSV21925.1"
                     /translation="MTEPTHKIFVMTAACGFMLAAVSSDWRGEAAETPDNKLWQAVAP
                     GRVEPWSGEIKIAAPIVGRIGDVLVKVNDKVFAGEPLIRLDDDEIQARLLVGQGQVAV
                     RKRARNDQRASNRASARRQAEDAVADSEQAVVEARSALDKAAAVRRAGKGSEDDIDAA
                     RARLTRAQDRLKQQKVDLRRLETDFGAPLPSQTEGQLTIARAELLGIEAAIEKMTIRA
                     PIGATVLQINAKAGELATPSAAQPLLLLGDISAMRVRAELDERDFGDIKIGQTVLVRA
                     AAFREREFAGKVLSIAPIVQSSRISVRDQRNVTDVSVAEVLVDLAEPGPLKVGMKVDV
                     YFRR"
     gene            4186..>4815
                     /locus_tag="VLJ17_02740"
     CDS             4186..>4815
                     /locus_tag="VLJ17_02740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HSV21926.1"
                     /translation="MAPASVARASTSADSIKGLAQAVAKPAYRRLLGAEPALRRAVPL
                     LIITFLVTMAVGTGVQVLDHRRQTLAAVTAEIEILADILNLRLDGATAGAKENVKDAT
                     RVAQDAITATIQQYGVGGTILVSDAEGTVVAAEPSHYAVGRALIDVLGPGRPLTTFGA
                     VVGPPEMPLSDGTGAMMTVRNLRSPLGQVAFVRPKAQALSAWSSDTALTV"
BASE COUNT          914 a         1401 c         1480 g         1020 t
ORIGIN      
        1 tcgacccgag cgtcgctgca ttctggcaaa gctggctcgc actgccattc tggccaagcg
       61 ggccgccgtg gttcttgtgg caactgttgg tgttgaacat cgctgccgcc gccgttcaca
      121 aatttgctcc ccgctgggga aagcttcttg gccggctggc gtccttcggg ggcgcccatc
      181 cgaaccggct ttttgcaggc ctggtgatcg cctcggcttt ggcctatgta cctctggcca
      241 ttatatttac gccgtgggag tggttgcaac tcgggccgtt cgccctccaa ctctgtcggc
      301 cgcttcacta cgcggtctat ttttttgccg gtgtcggcgt cggtgcccat gggatcgaca
      361 acgacctctt tgcgtccacc ggtttgctgg cgcgacgttg ggcggggtgg cttgcagctg
      421 cagtcgcagc gttcttgctc tggatcgctt caactgcgct gacaatcgag ctccgagaca
      481 cagccccact tggtttgcaa atcatagcag atctcggctt cgtgctgtcc tgtgcgagca
      541 gctctttttt cctcatagca atgttcgtgc atttcgccag gaaccgctcg aggatactcg
      601 acagcctttc ggggaatgcc tatggcatct atctgatcca ctatgtattc gtcatctggt
      661 tgcaatacgg gctgctgaac gcgccatttt ttgccgttgc gaaagccgca atcgtatttg
      721 tcgtcacact ggttctgagc tgggctataa tggcggcctt gcggcaactc ccgctccgct
      781 ttggctgcgc ggcataaacg atgagcgatt ggccaaagcg ccgacggagc ggcatacatg
      841 tcattgattt ttaggctttc ctggcgaaac ctgtttcacg atcggctgcg atttgtcgcc
      901 acgatcattg ggatcgtctt ctccatcgtt ctcgtaaccg tgcaaatggg cctgttcctg
      961 agtttcgatc gcatggtgac gaccatgatc gaccatgcgc aagccgacct ttggattgtc
     1021 cccctcggca cgaagtgttt tgaagatccg tcgcttgtcg atgaacgcga aagatttcgc
     1081 gccctgtcga tcaacggggt tacggaggcg ctgccaatcg taatcggctt tgcccaatgg
     1141 cgattaccga gcggcggcac gacgcccgtt ttcattgtta gttcggacac cagggtcggg
     1201 ggattgcacc cttggaattt ggtggaaggc agccttgccg atcttgccgt tccgggcgcg
     1261 gtggcaatcg atcaatctta tttcgatcgg ctcggaacca aggggctcgg cgcgaatgcc
     1321 gagattcgag atcaaaaggt cgaagtgatg gcagtgacca aaggtattcg cgcgttcacg
     1381 acgacgccgt atgtcttcac gtccctggac caggcgcgcg cctttatagg cacgccaccg
     1441 aacaaagcga cgtatttcct ggtgcgtctt gcccccgatg cggatatcgc aagcgtgcgc
     1501 agccgactgc ggacgattct gtccgaatcc gaagtcctca cgcccagcga atttcgacga
     1561 cgcagccggt ctttctggtt attcggcacc ggagccggcg ctgccctctt cgcgggcgcc
     1621 ttgctcggca tcatcgtagg gaccgtcgtc gtcgcacaga ccctgtattc cagcaccaag
     1681 gatcacttga acgagtttgc gacactgcgg gcgatggggt cttcagcgag atatattcac
     1741 aaggtgatta tctgtcaggc gctcttgagc gccgtcatcg gattctgcat cgcggctggc
     1801 atcggtttga tcattgtcga tgcgacggca gagtcggcat tgccagtact catgacacca
     1861 gcgatgagcg tgggtttgtt gctgctgacc gtcgccatgt gcgtcttgtc ctcgacttcc
     1921 gctattgtgc aggtgatgcg catcgatccg gccgtggtct ttacgcgatg acagaagccg
     1981 taatggaggc ggtcgacgtc gtaaaaactc tcggacgcgg cccaagtcag gtgcaagccc
     2041 tccggggcgt gagtcttgcg cttgcgggcg gtgaactaac ccttttgatg ggcccctctg
     2101 gcagcggcaa gacgacgctt ctctccatac ttggatgcat tctgtcgccg acgagcggta
     2161 ttgttcgcgt ctgcggccaa tcaacagcac acatacaacc cgaagatatg gcgaggctca
     2221 gacgcgatca cgtcgggttc atttttcaat cctaccatct gtttccgaca ttgacggcgc
     2281 tagacaatgt tcggctggcg ctggacgtgc gtgatgagcc atcggcggcc gcaattttca
     2341 aggcaaagga agcgctggcc accgtcggcc tttcgcacaa gatgaagtca tttccgcgtg
     2401 cgctcagcgg cggtgaacaa caacgcgtcg caattgcgcg cgccattgtg ggcaatccct
     2461 cagccgtcct ggcggacgag ccaacatcgg cgctggacgg cgacaatggg caggccatca
     2521 tgaaggtgct ggctcagatc gccaaagagc agtcgtgcgg cgtattggtc gtcacgcacg
     2581 atcctcgtat ctttcggttt gccagtcgga tcgtccggat cgaagacgga cgcatcgtcg
     2641 gcgaggaaag ggcagcgcag gactcaattg aaaagagggg gtaaatgtga gttccatgac
     2701 tgagccaacg cacaagatct ttgtcatgac cgcggcgtgt gggttcatgc ttgccgcggt
     2761 ctcctcggat tggcgggggg aagcggcgga gacacccgat aataagctct ggcaagcggt
     2821 tgcccctggg cgcgtcgagc cctggtcggg cgaaatcaag atcgcggcgc cgattgtcgg
     2881 tcgcatcggc gatgtgctgg tcaaggtcaa tgacaaggtg tttgccggag aaccgttgat
     2941 acgcctcgat gacgacgaaa tccaggcgcg gttgcttgtc gggcaaggac aggtcgcggt
     3001 gcgcaagcgt gcgcggaacg accagcgcgc ttcgaacaga gcctctgccc gccgccaggc
     3061 ggaggacgcg gtagctgaca gcgaacaggc cgttgtcgag gcgcgttcgg ccctcgacaa
     3121 ggcggccgcc gtcaggaggg ccgggaaggg ctcggaggat gacatcgacg ccgcacgcgc
     3181 cagactaacg cgcgcgcagg atcgtttaaa gcaacaaaaa gtcgatcttc gtcggctcga
     3241 gaccgatttc ggcgctcctt tgccgagcca gacggaaggg caactcacta tcgcacgcgc
     3301 tgaactgtta ggcatcgagg cggcgattga aaagatgaca attcgcgcgc ctattggcgc
     3361 cactgtgctt cagatcaacg ccaaggcggg agaactggca acgccgtcgg cggcgcagcc
     3421 gcttttgttg ctcggcgata tttccgctat gcgcgtacgc gcagaactgg atgaacgcga
     3481 ctttggggac atcaagatcg ggcaaacggt actcgtacgt gcggcagctt tccgcgagcg
     3541 cgaatttgcc gggaaggtcc tctcgatcgc tccaatcgtc caatccagcc gcatcagcgt
     3601 gcgtgatcaa cgcaatgtca ccgacgtcag cgtggcggaa gtcctagtcg atttggccga
     3661 accaggaccg ctcaaggtgg gaatgaaggt ggacgtctac ttccgcaggt gaaatcacgc
     3721 cgggcgcgga cctcgcaacc gcggcgggcg ccaccgccca ataccgcaac gccgccgcca
     3781 acgctgagat tgcggcgcgg ttgatgagcg cgttcccatc gtggcgcgcc ctcgaatccg
     3841 agcgcgcgac agagcagaag ccgcactcag gcgggttgcc gccagcacgt cgctttgaca
     3901 ccgataactg cgacatcgca ttgcgcacgc ccggcactgg cagagtttga aacctgtcaa
     3961 gcgctaaaat accgtcgcga ggcgacctct ggacaacttc agaaatacct gtgccgtcgt
     4021 tacttttgct gtatttgcaa caggcaagat ttttttaacg attgtggcgg cgcgactctc
     4081 gacaaagaat cccgattcgg attcttatga tggcgattcg ggagcgtcgg gggcgacatc
     4141 cttccggagc aggggctaaa atctgttttc ggatgggggc aagcgatggc gccagccagt
     4201 gttgcgcgcg cgtcgacgag tgcggattcg atcaagggac ttgcgcaggc cgtagcaaag
     4261 cccgcgtacc gacgccttct tggcgccgag cccgcgttgc gccgtgcggt gccgctgctg
     4321 atcatcacct ttctggtcac aatggcggtc ggcaccggcg tacaagtcct tgatcaccga
     4381 cgccaaacgc tcgccgccgt cacggcagaa atcgaaatcc tggccgacat tctcaatctg
     4441 cgtcttgacg gcgcgaccgc cggtgccaaa gagaacgtga aggatgccac gcgtgtggcg
     4501 caggatgcga tcacagccac gatccagcaa tatggcgtag gcgggacgat cttggtttcc
     4561 gacgcggaag gcaccgtagt ggcggcggag ccgtcgcact atgcggtcgg ccgagcgttg
     4621 atcgacgtgc tcggccccgg ccgaccgctt accaccttcg gtgcggtcgt cggtcccccg
     4681 gaaatgccgt tgtcggatgg tacgggcgcg atgatgacgg tacgcaatct gaggagcccg
     4741 ctcggccagg tcgccttcgt aaggcccaaa gcacaagcgc tgtcagcgtg gagttcggac
     4801 accgccctta cggtg
//
LOCUS       DATILV010000123         1774 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3351577, whole genome shotgun sequence.
ACCESSION   DATILV010000123 DATILV010000000
VERSION     DATILV010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1774
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3351577"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            20..1324
                     /locus_tag="VLJ17_02745"
     CDS             20..1324
                     /locus_tag="VLJ17_02745"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009338035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HSV21927.1"
                     /translation="MRVAMIGSGYVGLVSGACFADFGHHVTCVDKDADKIARLRKGEM
                     PIFEPDLDRLVVGNTREKRLDFSTELSGPVAEADAVFIAVGTPSRRGDGHADLSYVHA
                     AAAEIAAALTGFTVVITKSTVPVGTGDEVERIIRELRPNADAAVVSNPEFLREGAAIQ
                     DFKHPDRIVVGTEDERARRVMAELYRPLYLNQAPILFTSRRTAELTKYAANAFLATKI
                     TFINEIAELCEKVGADVQQVARGIGLDNRIGSKFLHAGPGYGGSCFPKDTVALIKTGQ
                     DYEAPLRIVETVAAVNEARKRGMFRKIAAALGGSLRGKTIAVLGLTFKPNTDDMRDAP
                     SIPLITALTDMGAIVRAYDPIGMDQARQLLAGIEFCDGPYVCAKGADALVIVTEWEQF
                     RALDFDRLKGVMKQAVLVDLRNVYRPEDLQGFAYYGIGRSSG"
BASE COUNT          374 a          522 c          535 g          343 t
ORIGIN      
        1 caagcacacg gaacatctta tgcgcgttgc gatgatcggc tccggctatg ttggcctcgt
       61 gtcgggggct tgctttgcgg atttcggcca tcacgtcacc tgtgttgaca aggatgccga
      121 caagatcgcg cggctgcgga agggcgaaat gcccattttc gagccggacc tcgaccgtct
      181 ggttgttggc aacacgcgcg agaaacggct cgatttcagc accgaactct ccggtccggt
      241 tgcggaggcg gacgccgtgt tcatcgcggt gggcacgccg tcgcgccgcg gcgacggcca
      301 cgcggacctt tcctacgtcc atgcggccgc agctgagatc gccgcagcgc tcactggctt
      361 tacggtggtg atcaccaaat cgaccgtacc ggtgggcacc ggagacgagg tcgaacgcat
      421 catccgggaa ttgcgcccca acgcggatgc ggcagtggtg tcgaatccgg aatttctgcg
      481 cgagggggcg gcaattcagg attttaagca cccggatcgc atcgtagtcg gcaccgagga
      541 cgaacgcgcc cgcagggtga tggcggaatt atatcggccg ctctacctca accaagcgcc
      601 gatcctcttt accagccggc gcaccgcgga actgaccaaa tacgccgcca atgcgtttct
      661 ggccaccaag atcaccttca tcaacgagat cgcagagcta tgcgaaaaag tgggggccga
      721 cgtgcaacag gtggcgcgcg ggatcgggct cgacaaccga atcggcagta aatttctgca
      781 cgccgggcct gggtatggcg gatcgtgctt ccccaaagac acggtcgcat tgatcaagac
      841 cggacaggac tacgaagcac cgctgcgcat cgtcgagacg gttgcggccg tcaacgaagc
      901 ccgcaagcgc ggcatgtttc gcaagatcgc cgccgccctc ggcggcagcc tgcgcggtaa
      961 gaccatcgca gtgctcggcc tcaccttcaa acccaatacc gacgacatgc gtgatgcgcc
     1021 ctctattcca ctgatcacag cgctcaccga catgggggcg atcgtgcggg catatgatcc
     1081 gatcgggatg gatcaggccc ggcagttgct tgctggaatc gaattctgcg atggccctta
     1141 tgtgtgcgcc aagggcgctg acgcgcttgt cattgtcacc gagtgggagc aattccgcgc
     1201 actcgacttc gatcgcctca agggcgtgat gaagcaagca gtgctggtcg acctgcgcaa
     1261 cgtctaccgg cccgaagact tgcaagggtt tgcgtattat ggcatcgggc gatcgtcagg
     1321 gtgagcgatg acacgcggcg gcggtcccgg ctgctgaatt gagccgctac acgtgatcga
     1381 attcatgcaa tttgccactc ttagataacg actttgtagg tacgaaggta caaggctccg
     1441 cggcgttaac cccgtgataa ccataaggga tttatgaacg ttgggtatga catgcgtaac
     1501 gacccccagt caggatgcaa aaccagaatt atactctggc agtatttcct gtacttcgct
     1561 ccgtcaggaa gcccccaata cgcaagttaa aagattgcta tctcgcccgc cgctgtgcag
     1621 cttgtcgggc acaccagcga aattggccgg cataaccgga atatttatcg cacttctgct
     1681 gggttcaaat ctggtgcccg cgaaggctgg aacggaagtg ctgggagagc tcgacgcgtt
     1741 gcaatttcgc gccgagaacg cctcgacacg cgaa
//
LOCUS       DATILV010000124        13597 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3862611, whole genome shotgun sequence.
ACCESSION   DATILV010000124 DATILV010000000
VERSION     DATILV010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 13597)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13597)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13597
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3862611"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            219..497
                     /locus_tag="VLJ17_02750"
     CDS             219..497
                     /locus_tag="VLJ17_02750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal/formaldehyde-sensitive transcriptional
                     repressor"
                     /protein_id="HSV21928.1"
                     /translation="MTHTIREKTKLLNRVRRIRGQIEAVERALDQEIGCADVLQLIAG
                     ARGAINGLMAEVMEDHIRAHIIDPVHEADAQRAHAAEELIDVVRSYLK"
     gene            complement(585..1196)
                     /locus_tag="VLJ17_02755"
     CDS             complement(585..1196)
                     /locus_tag="VLJ17_02755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015665156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor
                     SspB"
                     /protein_id="HSV21929.1"
                     /translation="MSVDHIRYDLLTQDALRGVIRTVLTDVAVKGLPGEHHFFITFDT
                     RADGVRMSARLKASYPGEMTIVLQHQFWDLAVGEDDFDVGLAFNGIPERLHIPFKAVR
                     AFMDPSVQFGLQFTVDVEAAKEADPDVPADAPAAMTKPARGEKPTPAKQGPVAKSPKP
                     PKPSKKEPGPQTGTDATEPVPLATTNKGPSTGEVVRLDRFRKK"
     gene            complement(1236..1670)
                     /gene="ssrA"
                     /locus_tag="VLJ17_02760"
     tmRNA           complement(1236..1670)
                     /gene="ssrA"
                     /locus_tag="VLJ17_02760"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01849"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="alphaproteobacterial-type; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF01849"
     gene            1787..2395
                     /locus_tag="VLJ17_02765"
     CDS             1787..2395
                     /locus_tag="VLJ17_02765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009029401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate transporter"
                     /protein_id="HSV21930.1"
                     /translation="MSKSDPMPSEIPADALDAPSAAAPPSIVDLFLAFAGLSLSGFGG
                     VLAWARRMLVENKRWMTAEEFNHLLALCQFLPGPNIVNFCAVFGVRARGVPGALACLT
                     GLLGPSVVLMIAAGTLYRRFGALPKLHGVLSGLAAAAAGMIMATVVKLAEPLFRFRLG
                     PEHAVAIATFVAIGVLRLSLPLVLLVIVPTSIALAWRRTNDK"
     gene            2385..2918
                     /locus_tag="VLJ17_02770"
     CDS             2385..2918
                     /locus_tag="VLJ17_02770"
                     /inference="COORDINATES: protein motif:HMM:NF014471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate transporter"
                     /protein_id="HSV21931.1"
                     /translation="MTNDSATLAALFLQFAILSFFAVGGGGSAVPEMHRQTVEIAQWL
                     TDRQFSELFAVAQAAPGPNIMFVALLGHFIAGVPGAVVATVAMCGPSCVLAYAVSHVV
                     DRFREARWRIAVQAGLVPVTIGLIAASALIIARAADNNWVGFAITAGTFAFVHWTRLS
                     PLVAFACAALVGLGGFV"
     gene            3014..3547
                     /locus_tag="VLJ17_02775"
     CDS             3014..3547
                     /locus_tag="VLJ17_02775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HSV21932.1"
                     /translation="MSENVSGVPEPENRRSFVRAPREFYGGLLLLALALFAIWASWDL
                     PGRRGFAFGPGTAPFIFAMALGALGIAVAVTGVLTKGPDIDRFYFRGPFFVTLSVVLF
                     AWLVRPLGLVIASFLSIVAAAGATPEARLLETLIWGAVLTAFCCLLFPYALNLPMQMW
                     PNNWDLATILKGLSSIR"
     gene            3594..5099
                     /locus_tag="VLJ17_02780"
     CDS             3594..5099
                     /locus_tag="VLJ17_02780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008974511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HSV21933.1"
                     /translation="MLDLLHNLALGFGVALSPMNVFLCLIGAMVGTLIGVLPGVGPLA
                     TIAMLLPITFGLPPVGALIMLAGIYYGAQYGGSTTSILINIPGEASSVITTLDGHQMA
                     KRGRAGPALAIAAIGSFFAGCVSTVLVAALGGPLTSVALLFGPAEYFSLMTLGLCFAV
                     VLARGSVLKALAMVLLGLLLSMVGSDIETGQSRMAFDIPELSDGIGFVVVAMGVFGFA
                     EIMRNLEQTGTRDVINAKLSGLMPTWPDLKASAGAIGRGTLLGAILGILPGGGAVIAA
                     FAAYTFEKKMSKDPSRFGHGAIEGVAAPESANNAAAQTSFIPLLTLGIPPNAVMALMV
                     GAMTIHGIVPGPQVMTKQPELFWGMVASMWLGNLMLIIINLPMVGMWVKLLQVPYRFL
                     FPAILIFCSIGVYSINNAPFDCVITAVFGLVGYWLVKHDFEPAPMLLGFVLGPLMEEN
                     LRRAMLIARGDPTTFLTRPISGVLIGLAVVLLVLAALPMIAKKRDEVFVED"
     gene            5249..6043
                     /locus_tag="VLJ17_02785"
     CDS             5249..6043
                     /locus_tag="VLJ17_02785"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004799 - thymidylate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006231 - dTMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HSV21934.1"
                     /translation="MRQYLDLMERVLVDGVEKRDRTGTGTLSVFGHQMRFDLSAGFPL
                     VTTKKLHLKSIIYELLWFLAGDTNVKYLNDHGVSIWDEWADARGELGPVYGHQWRSWP
                     TRDGRAIDQIANVIDAIRRNPDSRRLIVTAWNPADIDRMALPPCHCLFQFYVAKGRLS
                     CQLYQRSADVFLGVPFNIASYALLTMMAAQVTGLAPGEFIHTVGDAHLYLNHLDQARL
                     QLARTPRPLPVLRIKPAAVDLFAFGFEDFVLEGYDPHPHIKAKVAV"
     gene            complement(6061..6759)
                     /locus_tag="VLJ17_02790"
     CDS             complement(6061..6759)
                     /locus_tag="VLJ17_02790"
                     /EC_number="1.5.1.3"
                     /inference="COORDINATES: protein motif:HMM:NF012413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004146 - dihydrofolate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HSV21935.1"
                     /translation="MARSSPHNIIGRENELPWHLRTDLQRFKAITIGHPIIMGRRTFL
                     SIGRPLPDRVNIVLSRRSEFDPKNCFWHQNGTMLLWAENRESALFFADVISISKEKLD
                     FFVIGGAEMYRIFEDLFNKIYLTEVLTGDSFRREPNDAVFDYKIDNRQWKTIETQSLP
                     SGDQDDFPSRFTVLERKTKYVRYIEVKNYLTEVYSKNKWINDQLDFFDKFKTANPSKP
                     LKVPYQYQLFSDSA"
     gene            7104..8246
                     /gene="hflK"
                     /locus_tag="VLJ17_02795"
     CDS             7104..8246
                     /gene="hflK"
                     /locus_tag="VLJ17_02795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007613356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0045861 - negative regulation of
                     proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease activity modulator HflK"
                     /protein_id="HSV21936.1"
                     /translation="MPWSNQGGGPWGSGPKGPWGSGSPPSGSSPPDLEELLRRGQDKL
                     RNVLPGGNFSAAGALFITLLAIVLWLFSGIFQVAPDERGLVMRFGKFNRIADPGLSYH
                     LPYPIESVEIPKVTRVTPISIGLRLVEDTRRGTQTRDVPEESLMLTGDENIVDVDFTV
                     FWVVAAGATGVTDFRFNMQNPEGTVKAVAESAMREVIGRSELEPVLTGGRQRIETEVH
                     ELVQKTLDQYKAGITVTQVQMLKVEAPTQVIDAFRDVQVAQADQERAQNDARNYAGRV
                     VPEARGRAAQLLQSADAYREQTVAEATGQTARFNKIYEEYKKAPDVTRQRLYLETMER
                     LFGGTDKIILDSSGQGSGVVPYLPLPELRNRPPAAQPPQPTTGGNR"
     gene            8243..9148
                     /gene="hflC"
                     /locus_tag="VLJ17_02800"
     CDS             8243..9148
                     /gene="hflC"
                     /locus_tag="VLJ17_02800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0045861 - negative regulation of
                     proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HSV21937.1"
                     /translation="MKFNFVGAFLVVVAFLLIAAYGSLFTVYQTRQALVVRLGEPVRI
                     ITEPGLHVKYPIIDTVIPIDNRILDLENAAQEVFASDQRRLVVDAFARYRITDALRFY
                     QTVGSIEGANSRLSSLLNAALRRVLGEATLIHVVRDERAALMARVRDQLDREARAFGI
                     EVVDVRIRRADLPEQNSQAVFQRMQTERQRQAAAIRAEGNQKSQEIRAKADRDVTVLV
                     AEAQSRAEQIRGEGDAERNRIFAEAYTKDPDFFAFYRSMQAYEAGLRASDTRLVLRPD
                     SDFFKYFGNPTGKETPREAPRATAQ"
     gene            9176..9361
                     /locus_tag="VLJ17_02805"
     CDS             9176..9361
                     /locus_tag="VLJ17_02805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008876587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2065 domain-containing protein"
                     /protein_id="HSV21938.1"
                     /translation="MTDFLAALGLVFVIEGLVFAAFPGTAKRAVAAMAQTPDQGLRLV
                     GLFSAVVGLLILWLVRG"
     gene            9483..11003
                     /locus_tag="VLJ17_02810"
     CDS             9483..11003
                     /locus_tag="VLJ17_02810"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Do family serine endopeptidase"
                     /protein_id="HSV21939.1"
                     /translation="MAGFPPPYFGNSLIRSTCRLALAAAAAVTVAVPLAAGPAHARGP
                     DNIADVAEKVINAVVNVSTSQSVDNRNSATPPPLLPPGSPFEEFFDEFFKNRRGQQGD
                     NNQNRPNGPRRQNSLGSGFIIDPSGIVVTNNHVISDADEVTVILNDGSRLKAEIIGRD
                     TKVDLALLRVKSEKPLTAVQFGDSEKLRLGEWVVAIGNPFSLGGTVTAGIVSARNRDI
                     NSGPYDNYIQTDAAINRGNSGGPLFNLDGEVIGVNTAIISPSGGSIGIGFAVPSKTAI
                     AVIDQLRQFGETRRGWLGVRIQQVTDDIADSLNIKPARGALVAGIDEKGPAKPAGIEA
                     GDVIIKFDGKEIKEMKDLPRIVADTPVGKDVDVVIVRKGKEESRSVKLGRLEDGEKQA
                     ALTPNKDAAPQEKTVVQKTLGLNLANMTDDLRKRYKIKDNVKGVVITGIEAQSPAADK
                     RLTAGDVVVEVSQEAVSDTDALQKRVDQLKKEGRKTALLLVANADGELRFVALTLQ"
     gene            complement(11110..12009)
                     /gene="serB"
                     /locus_tag="VLJ17_02815"
     CDS             complement(11110..12009)
                     /gene="serB"
                     /locus_tag="VLJ17_02815"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018319718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036424 - L-phosphoserine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HSV21940.1"
                     /translation="MTHVATLIAHPAQGIPDNIGPRAARKLPAAGVPAWLNPGVALDI
                     PFTPSSENDNRMTAESLRAALGGAPIDVVVQHAGRRRKRLFLADMDSTMIGQECINEL
                     ADFVGQKARVAAITERAMRGEIEFAPALRERVALLAGLPATVVDDVIAKRITLTPGGR
                     TLVQTMRRHGAHTCLVSGGFTVFTTRIAALIGFDENRGNHLTITNDGCFLGTVAEPVM
                     DRDAKLETLKELRSSLGLARDETLVVGDGANDLAMIGDAGLGIAFRAKPLVAEAAAAR
                     IDHGDLTALLYAQGYCQDEFVEG"
     gene            12067..12996
                     /gene="miaA"
                     /locus_tag="VLJ17_02820"
     CDS             12067..12996
                     /gene="miaA"
                     /locus_tag="VLJ17_02820"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008131505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0052381 - tRNA dimethylallyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HSV21941.1"
                     /translation="MQDNAREKVAVLIAGPTASGKSALALAVAERIGGIVVNTDSMQV
                     YGDLAIITARPGGAELARVPHLLYGHVDAAENYSVGRFLGDAAAALEAARAERRIPIF
                     TGGSGLYFKALTAGLAAIPPVPPEIRATVRSRLEASGPVALHAELSRRDPVMAARLRP
                     ADRTRIARALEVVEATGRSIVDWQQKGMPPLLDITRIAKIFLAPDRAALFGRIDTRFD
                     AMLSAGALDEVRALAARRLDPLLPAMKAHGVPWLIRHLGGEISLAAAATEAKKDTRHY
                     AKRQFTWFRHQLADWPRVDPAVACDVLMRNIGR"
     gene            complement(12998..>13597)
                     /locus_tag="VLJ17_02825"
     CDS             complement(12998..>13597)
                     /locus_tag="VLJ17_02825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020175336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RMD1 family protein"
                     /protein_id="HSV21942.1"
                     /translation="LRGIRARVTAPSAKIEDEVATIEIAPERDDQIVIGGPISVKDLT
                     PPRLLVIADVLAKNVGLVRDEREVNKVLELIEPFASRLAATGRAPFNRRNMLRLIGQA
                     LLVHHRMSGRIAIEEKPDVLWDRSDLERLYARLEDEYELKERAIALRHKLQVIEETTR
                     ALTDIIDTERSARLEFVIAILIVVEILIAFYELFYRVPR"
BASE COUNT         2550 a         3969 c         4174 g         2904 t
ORIGIN      
        1 actgatcgcg tcgggaacat cggcgagcca catatgcgcc tccagttgac acgatacacc
       61 agtcggccgg accccgaaaa ggggcccttg gactaagtga ccaaagtcaa ttaaattgtc
      121 gcaatccaag gtatcgcggt cgatgtctcg tgcgcctttg tttccgctga ctgcatgggt
      181 ccgaatgatg acacggagaa caacccccgg agcttaaagt gactcacacc attcgtgaaa
      241 aaaccaaatt gctcaatcgt gtgcgacgta ttcgcggaca gatcgaagcc gtcgaacggg
      301 cactcgatca ggaaataggt tgtgctgacg tgctgcagct catcgccggt gcccgtggcg
      361 ccatcaatgg gctaatggcc gaggtgatgg aagatcacat tcgtgcgcat atcatcgatc
      421 cggtacacga ggccgatgcg caacgcgccc acgccgctga agaactgatc gatgtggtgc
      481 gttcctatct aaaatagctg acgctcgggg atggacgttt ccggaaaacc cgcggcccct
      541 gaggtatttc tgtcaggctt caatccgatc gatcacaaca gcggttactt tttgcgaaag
      601 cgatcgaggc ggacgacttc gccggtcgac ggtcctttat tggttgtcgc aagaggaaca
      661 ggttctgtcg cgtctgtgcc ggtctggggc ccaggttcct ttttagacgg ctttggcggc
      721 tttggcgact ttgccactgg gccttgtttt gcaggcgtgg gtttttcgcc ccgtgctggc
      781 tttgtcatgg cggctggggc atccgccggc acatccgggt ccgcctcttt ggcggcctcc
      841 acgtcgacgg tgaactgcag tccgaattga acggatggat ccataaacgc tctcacagcc
      901 ttgaacggga tgtggagccg ttccgggatg ccattgaaag caagcccgac atcgaagtca
      961 tcctctccaa ctgcaagatc ccagaactgg tgttggagca cgatggtcat ctcgcccgga
     1021 taactcgcct taaggcgcgc cgacatgcgc acaccgtcgg cgcgggtgtc gaaggtgatg
     1081 aaaaaatgat gctcccccgg caggccctta acggccacat cagtgagcac ggtgcgaatg
     1141 acgccacgca gcgcgtcctg ggtcagaaga tcgtagcgaa tgtggtcaac cgacatgaca
     1201 ggctcttgaa gaaagtggga ggcccttaaa gtcaaagtgg gggcttctgt tgccaggtgc
     1261 ccccgaaccc cgcctgacgc tgctaagacg tcaggacttt aagatcggtc tttcaagccg
     1321 cttacgcggc cagagcaacc ggagcatagt tgtcgttggc aactattgca gtggcccgat
     1381 aacggcggaa ccataccgag caaaagcacg tcctttacgc cctcgtcgat cctatttcgc
     1441 ccccgttatc aggtatcagt ggccagtaat ctgtgatcag aacaccacgg cacttcacga
     1501 tcgggctgaa gctattgttc tgattacaga ttactgaaca ctgcctcctg atggtggagg
     1561 cgccgggtac cgcccccggg tccgaatggt ttattgcgac ggccatttat cgccatagcc
     1621 ggcaagccgg catgtctaat atagtggcta acgggggaag gagaaagagt gggcttggcg
     1681 gttgtgcaaa cctggccggg tacctgaggc ttcagatctc ccgcttcggc gacatgatcg
     1741 gcatcgcgat ctcgtcatcg acaaattcaa gcggtaaccg gttaacatgt caaaatcaga
     1801 tcccatgcca tctgaaatcc ccgcggacgc gctggacgcg ccctcggccg cggcgccgcc
     1861 ttcgatcgtg gatttgtttc tggcctttgc gggcctttcg ctatcgggct tcggtggcgt
     1921 gttggcatgg gcgcggcgca tgctggttga aaataaacgt tggatgacgg ccgaggagtt
     1981 caatcacctc ttggcgctgt gccagtttct gcccggaccg aacatcgtca acttctgtgc
     2041 cgttttcggg gtaagggcgc gcggcgttcc gggtgcgctg gcgtgcctaa cgggactgct
     2101 cggcccatcg gtcgtgctga tgatcgcggc gggtacgctt taccgtcgct tcggggcctt
     2161 gccgaaactg cacggtgtgc tgtcgggcct agccgccgcg gcggccggga tgattatggc
     2221 gactgtcgtc aagctggccg agccgctttt tcgctttcgc ctgggcccgg agcacgctgt
     2281 ggcgatcgcg acatttgtgg cgatcggggt gctgcgtctg agcctccccc tggtgttgtt
     2341 ggtgatcgtg ccgacgagca tcgcacttgc ctggcggcgc accaatgaca aatgactcag
     2401 ccaccctggc cgcgctgttc ctgcagttcg cgatcttgtc gttcttcgcg gttggcggcg
     2461 gcggctcggc agtgccagaa atgcatcgcc agacagtcga gatcgcgcaa tggctcacgg
     2521 atcgccagtt cagtgaattg ttcgccgtgg cgcaggcagc gccgggacct aacatcatgt
     2581 tcgtcgcctt gctgggacat tttatcgcgg gggtgccggg cgctgtggtt gcgacggtgg
     2641 cgatgtgcgg cccgagttgt gtcctggcct atgcggtgtc gcatgttgtc gatcgctttc
     2701 gcgaggcgcg ctggcgcatt gcggttcagg ctggcctcgt gcccgtgacg atcgggctca
     2761 ttgcggccag tgcgctgatc atcgcgcggg cggccgataa taactgggtc ggcttcgcca
     2821 tcacggcggg aacattcgca tttgtccact ggacccggct ctcaccgctg gtagcgtttg
     2881 catgtgcagc gctcgtgggc ctgggcggat tcgtgtgacg tcggtaacga aggctttcgg
     2941 cacagccccg ccttgtgcta ggtataagct agggcataac ttggcaaact gagtgtgtgc
     3001 agggagggag tggatgtcgg agaatgtcag cggcgtaccg gagccggaga accgcagatc
     3061 gttcgtccga gcgccgcggg agttctacgg cggccttctg ttgctagctc ttgcgttatt
     3121 cgcaatttgg gcgtcttggg acctgccggg taggcgcggc tttgctttcg gacccggcac
     3181 ggcgccgttc atattcgcta tggcgctcgg agcgctgggc attgcggtgg cggtgacggg
     3241 ggtactcacc aaggggccgg acattgatcg tttctatttt cgcgggccat tcttcgtcac
     3301 cttgtcggtg gtattgttcg cttggttggt gcgcccgctc ggccttgtta tcgcgagctt
     3361 cctaagcatc gtggcggccg ctggcgcaac gccggaagca cgccttctcg aaacgctcat
     3421 ttggggtgcg gtgctgacgg ccttctgctg cctgctgttc ccttatgcgc tcaatctgcc
     3481 gatgcagatg tggccgaata attgggattt ggcgaccatc ctcaaaggtc tttcgtcaat
     3541 ccgatgaatg acatgccggc tgcggtccac atcaacagcg taagtaacca gccatgctag
     3601 acctccttca caatcttgcc cttggttttg gcgtcgccct gtcgccgatg aatgttttcc
     3661 tatgcctaat cggggccatg gtgggcacct tgatcggcgt gttgcccggc gtgggtccgc
     3721 tcgccacgat cgccatgctg ctgccgatta ctttcggtct gccgccggtc ggcgcattga
     3781 tcatgctggc cgggatctat tacggcgccc aatatggtgg ctcaaccacc tcgatcctca
     3841 tcaacattcc gggtgaggcg tcttcggtga tcacaacgct tgacgggcac cagatggcaa
     3901 aaaggggccg cgccggtccg gcactcgcca tcgcggcgat cggatcgttc ttcgcgggct
     3961 gcgtatcgac cgtgctggtc gccgcgctgg gcggaccgct gacgtcggtg gcgctgctgt
     4021 tcggtcccgc ggaatatttc tcgctgatga cgctcggcct gtgcttcgcc gtggtgctcg
     4081 ccagagggtc ggttctcaag gcgctcgcca tggtgctgtt ggggctcttg ctgtcgatgg
     4141 tgggctccga catcgaaacc ggtcaatccc gtatggcttt cgacattccg gaactgtccg
     4201 atggcattgg cttcgtggtc gtggccatgg gtgtgttcgg atttgccgag attatgcgca
     4261 acctggagca gactggcacg cgcgacgtca tcaacgccaa gctgagtggc ctgatgccga
     4321 cttggccgga tttgaaggcc tccgcgggtg caatcgggcg cggaaccttg ctcggcgcga
     4381 tcctcggcat tcttcccggc ggcggcgctg tgatcgcggc tttcgccgcc tatacgtttg
     4441 aaaagaagat gtcgaaggat ccgtcgcgct tcggccacgg cgccattgag ggcgtcgcgg
     4501 cgccggaaag cgccaataac gcagccgcgc aaacgtcgtt catccccctg ctcacccttg
     4561 gcattccgcc taatgccgtg atggccctga tggtcggcgc catgacgatt catggcatcg
     4621 ttccaggccc ccaggtgatg accaagcagc cggagttgtt ctggggcatg gtcgcatcaa
     4681 tgtggctcgg caatttgatg ctgatcatca tcaatctgcc gatggtcgga atgtgggtga
     4741 agctgttgca agttccgtac cgcttcctgt tcccggcaat tctgatcttc tgttcgatcg
     4801 gcgtctactc catcaacaat gcaccgttcg actgtgtgat aacggcagtg ttcggcttgg
     4861 tcggttactg gctggtcaag catgacttcg agccggcccc catgctgctt ggtttcgtgc
     4921 tgggaccgct gatggaagag aacctccgcc gtgccatgct gatcgctcgc ggcgatccaa
     4981 cgaccttttt gacccgcccg atctccggcg tcttgatcgg ccttgcggtg gtgctgctgg
     5041 tcttagcggc gttgccgatg atcgccaaaa agcgcgacga ggtgttcgtc gaagactgac
     5101 gaggtatcgc atcgtcaggg gttccggcgg gcatgtcccg ccggtttttt tggcacctga
     5161 ggaaatcgag ccgagggctt gcgttcgggc cgccaccgga gcgttactcg ttggctctag
     5221 ccgaatcgct gcctggacga gccgatctat gcgccaatat ctcgacctga tggaacgcgt
     5281 tcttgtcgac ggcgtcgaga agcgcgaccg caccggaacc ggcaccctgt cggtgttcgg
     5341 ccatcagatg cggttcgatc tctcggccgg atttccgctg gtcaccacca agaaattgca
     5401 ccttaaatca atcatctatg agctgctttg gttcctggcc ggggacacca atgtcaaata
     5461 cctcaatgat cacggcgttt cgatctggga cgaatgggcc gacgcgcgcg gtgagctcgg
     5521 cccggtgtac ggccatcaat ggcgctcctg gccgacccgg gatgggcgag ccatcgacca
     5581 gatcgccaat gtgatcgatg ccatccgccg caatccggat tcgcgccgtc tcatcgtgac
     5641 cgcatggaat cccgcggata tcgacaggat ggcgctgcca ccctgccact gcctgttcca
     5701 gttctacgtg gcgaagggca ggctttcgtg tcagctctat cagcgctccg ccgacgtctt
     5761 tctcggtgta ccgttcaaca tagcgtctta tgccctgctg accatgatgg cagcgcaggt
     5821 cactggtctc gcgcccgggg aattcattca cacggtcggc gacgcccatc tatatctcaa
     5881 ccaccttgat caggcacggc tccaacttgc ccgcacgccg cggccgctgc cggtattgcg
     5941 catcaagccg gctgcggtgg acctgttcgc gttcggcttc gaggattttg tcctcgaagg
     6001 ttatgatccg caccctcata tcaaggcgaa ggttgcggtg tgacgaggag atcaggagcg
     6061 ttaagcgctg tcgctgaaca gctggtattg ataaggaact tttaggggct tgctgggatt
     6121 tgccgtcttg aatttatcaa agaagtctag ctggtcgttg atccatttgt tctttgaata
     6181 tacttctgta aggtagtttt ttacttctat ataccggacg tattttgttt ttctctcaag
     6241 tacagtgaat cttgacggaa aatcgtcctg gtcgccagaa ggtaggcttt gcgtttcgat
     6301 cgttttccac tgtcgattat caattttgta gtcaaagact gcatcatttg gttcgcggcg
     6361 gaacgaatcg cctgtcaaca cctctgtcaa gtagatctta ttaaacaaat cttcaaaaat
     6421 ccgatacatt tcggccccgc caattacgaa gaagtctaat ttttcctttg agattgaaat
     6481 cacatcagca aaaaataacg cgctctcccg gttttcggcc caaagaagca tcgttccatt
     6541 ttgatgccag aagcagttct taggatcaaa ttccgatctg cgtgacaaga ctatattgac
     6601 tcggtccggc aacggtcgtc cgattgatag aaacgtccta cggcccatga tgataggatg
     6661 cccgatggta attgctttga agcgctgcaa gtccgttcgg agatgccatg gcagttcgtt
     6721 ctcacgacct atgatattat gaggcgaact gcgagccacg atataagaga ttgacggaag
     6781 tcttatacgc accgcgacag cgccttctcc gttgaatttg gcttaggata cacgatatcg
     6841 agcgcactat gtcgcacgag ttggtttacc gatcgtgtta caagcctatc atcgtgtgcg
     6901 cccgcgagca ccatgttacc gggattgcca actgagatgg tttagttcgg tcgcgttgtg
     6961 cccaagccct cgctccccta taagcttgcg aagcgggcac ctccgcgttt tcgcggtaga
     7021 tggcaacaag agacaagttt gagaagaccg cggagcagtt aaggcagcgg ccggtggttt
     7081 gcgcaaggta tggagggtag gcgatgccgt ggagtaatca agggggtggc ccttggggct
     7141 cgggtccgaa ggggccgtgg ggctcaggtt ccccgccgtc gggttcgtca ccacccgacc
     7201 tcgaagaatt gctgcgccgc ggccaagaca agctgcgtaa cgtgctgcca gggggcaatt
     7261 tcagtgctgc cggggccctg ttcatcacgc tgctggccat cgttttgtgg ctcttttccg
     7321 gaattttcca ggtcgcaccc gacgaacgtg gtttggtcat gcggtttggc aaatttaacc
     7381 gaattgctga tcccggcctg agctaccacc tcccgtatcc gatcgaatca gtggagatcc
     7441 ccaaggtcac gcgggtgacc cccatctcga tcgggctgcg acttgtcgag gacactcgcc
     7501 gcgggaccca gacgcgcgat gtgccggagg agagtttaat gctcaccggc gatgaaaaca
     7561 tcgtggacgt ggactttact gtattttggg tggtcgcggc gggggccaca ggtgtaaccg
     7621 actttcgctt caatatgcaa aatccggaag gtacagtgaa ggcggtggcc gaaagcgcca
     7681 tgcgcgaagt gatcgggcgt tccgaactcg aacctgtcct caccggagga cgccagcgaa
     7741 tcgaaaccga agtacacgaa ctcgtgcaga agacgctgga tcaatacaag gctggcatta
     7801 cggtcactca ggtgcaaatg ttgaaggtgg aagcgccgac gcaggttatc gatgcgttcc
     7861 gcgatgttca ggtagcccag gccgatcagg aacgtgcaca gaatgacgca cgcaactatg
     7921 cgggtcgcgt ggttccggag gctcgtggtc gcgccgcaca gttgctgcag tcggccgacg
     7981 cctatcgcga gcaaaccgtc gccgaggcca ccggccagac cgcacggttc aataagatct
     8041 atgaggagta caagaaggca ccggatgtga cccgccagcg tctctatctt gagaccatgg
     8101 aacgtctgtt cggcggcacc gacaagatta tcttggattc atccgggcag ggcagtggcg
     8161 tggttccgta tctgccgctg ccagaactgc gcaaccggcc gccagcagcc cagccgccgc
     8221 aaccgaccac tggaggcaac cgatgaagtt caattttgtc ggcgctttcc tggtcgtcgt
     8281 cgcgttcctg ctgattgctg cgtacggatc gctgttcacc gtctatcaga cccggcaggc
     8341 gctggttgtt cgcctcggcg aaccggtgcg gatcatcacc gagccgggtc ttcacgtgaa
     8401 gtacccgatt atcgatactg ttatccccat cgacaaccgc atccttgatc tcgagaatgc
     8461 agcccaggaa gtcttcgctt ccgatcaacg gcgcctcgtg gttgatgcgt ttgctcgcta
     8521 tcgcatcacc gatgcgctgc gtttctacca gaccgtcggt agcatcgagg gggccaattc
     8581 gcggctttca agcctgttga acgcggcgct gcgccgtgtg ctcggggaag ccaccttgat
     8641 ccatgtggtg cgcgatgagc gcgccgccct gatggcacgc gttcgtgatc agctcgatcg
     8701 cgaagcccgc gccttcggca tcgaagtggt cgacgtgcgc atcaggcgcg ccgatctgcc
     8761 ggagcagaac agccaggctg tgtttcagcg catgcagacc gagcggcagc ggcaagccgc
     8821 agcaatccgc gcagagggca accagaaaag ccaggaaatc cgagccaagg ccgaccgcga
     8881 cgtcacggtg ttggtggccg aagcgcagtc gcgcgccgag cagatacgcg gcgagggcga
     8941 tgcggaacgc aaccgtatct tcgccgaagc ttataccaaa gacccggatt tctttgcctt
     9001 ctaccgttcc atgcaagcct atgaggcggg actgcgcgcc agcgacaccc ggctcgtgct
     9061 gcggccggat tccgatttct tcaagtattt cggcaatccg actggcaagg aaacgccccg
     9121 agaggcgccc agggcaactg ctcaataagt cagtggcgtc tcactgaaac gccaaatgac
     9181 cgattttttg gcagcgcttg ggctggtctt cgtcatcgag gggcttgttt tcgcggcatt
     9241 cccgggaacg gccaaacggg ccgtggcggc aatggcgcaa acgcctgacc aagggttgcg
     9301 actggtcggg cttttcagcg ccgtagtggg cttgctgatt ttgtggctgg tgcgggggta
     9361 gcggcgcccg aggtcgattt tccgccggag tcctcgctat ctgggtcagc gatcattacg
     9421 ctcttgcgcg acgccgctga caggcgcact cttagctgat cttccgagga gaccagacgc
     9481 ccatggccgg ctttccgccc ccctattttg gcaattccct tatccgttcg acctgtcgcc
     9541 tggcgctggc ggcagcggcc gcagtcaccg tagctgttcc gcttgcggcg ggacccgccc
     9601 acgcgcgcgg cccggacaac atcgcggacg tggccgaaaa agtcatcaac gcggtcgtca
     9661 acgtgtcgac atctcagagc gtcgacaatc gaaatagcgc gacgccgccg ccactgctgc
     9721 ctcctggatc gccattcgag gagttcttcg acgaattctt caaaaatcgc cgtggtcaac
     9781 agggcgacaa caaccagaac cggccaaatg ggccgcgtcg ccagaattct ttgggctccg
     9841 gcttcatcat tgatccgtcc ggcattgtgg tgacgaacaa ccacgtcatc tccgacgccg
     9901 acgaggtgac cgtaatcctt aatgacggct cgcgattgaa ggcggaaatc attggacgcg
     9961 acaccaaagt tgatctcgcc ttgttgcggg tgaagtcgga aaaaccactc accgcagttc
    10021 agttcggcga ctccgaaaag ctgcggcttg gcgaatgggt ggtggcgatc ggcaatccgt
    10081 tcagtctcgg cgggacggtg acggctggca tcgtgtcggc gcgaaaccgc gacatcaatt
    10141 ctggccctta tgacaactac atccagaccg acgctgccat caatcgtggc aactcgggcg
    10201 gtccgctgtt caatctcgat ggcgaggtca ttggcgtcaa caccgcgata atctcgccgt
    10261 ccggcggctc catcggcatc gggttcgcgg tgccgtccaa gacggcaatt gccgtaatcg
    10321 accaactccg ccagttcggc gagacgcggc gcggctggct gggcgtgcgc attcagcaag
    10381 tcactgacga catcgccgac agcctcaata tcaaaccggc gcgtggcgcg ctggtggccg
    10441 gcatcgacga aaagggaccg gctaagccag cgggaatcga ggccggcgac gtcatcatca
    10501 agttcgatgg taaagaaatc aaagaaatga aggacttgcc acgtatcgtg gccgatacgc
    10561 ctgtcggcaa agatgtggac gtcgtcatcg tacggaaagg caaggaagag agccgcagtg
    10621 tgaagctggg gcgtctcgag gacggcgaga agcaggcggc gctgacgccc aacaaggatg
    10681 ccgcgcctca ggaaaagacg gtcgtgcaaa agacgctcgg cctcaacctc gccaacatga
    10741 ccgacgacct gcgcaagcgt tacaagatca aggacaacgt taagggcgtc gtgatcactg
    10801 gcatagaagc ccagtcgccc gccgccgaca agcggctcac tgcgggtgat gttgtggttg
    10861 aggtgtctca ggaggcggtc agcgatacgg acgcgctgca aaagcgcgtt gaccaactca
    10921 agaaggaggg ccgcaagaca gcactgctcc tggtggccaa tgcggacgga gagcttcgct
    10981 tcgtggcgct aactctgcag tagttgtcca tcgccgtcct cggggagggc agggtgcggt
    11041 cttttcgagg gcagggcctt gcccatgtca ccgccacccc gacgttcggc gccaccctcc
    11101 ccgaaggagc tacccttcga caaattcatc ttggcagtag ccctgcgcgt aaagaagtgc
    11161 agtgagatcg ccatggtcga tgcgcgcagc ggcagcttcg gctaccagcg gcttggcccg
    11221 gaaggcgatg cctagtccgg cgtcgccgat catcgcgagg tcattcgcac catccccgac
    11281 caccagggtc tcgtcccggg caagaccgag actgctgcgc aattccttaa gggtctcaag
    11341 cttggcgtcg cgatccatca ccggctccgc aaccgtgccc aaaaagcatc cgtcgttggt
    11401 gattgtgagg tgattgccgc ggttctcgtc gaatccgatc agcgccgcaa tcctcgtggt
    11461 gaacaccgtg aaccctccgg acaccagaca cgtatgggcg ccgtggcgac gcatggtctg
    11521 gaccagggtg cgaccgcccg gtgtgagagt gattcgcttc gcgattacgt cgtcgaccac
    11581 agtggcaggc aacccagcca gcaatgcgac gcgctcgcgt aacgccgggg cgaattcgat
    11641 ctcacctcgc attgcgcgct ccgtaatggc ggccacacgc gctttttgcc caacgaaatc
    11701 tgccagttcg ttgatgcatt cctggccgat cattgtggaa tccatgtcgg cgaggaacag
    11761 gcgcttgcgt cgtctaccgg cgtgttgcac caccacgtcg ataggcgccc cgcccagggc
    11821 cgcgcgcaag ctttcggccg tcatgcgatt gtcgttttcg ctggacgggg taaacgggat
    11881 atcgagcgcc acgccgggat tgagccatgc gggaacgccg gcagccggca gtttgcgtgc
    11941 cgcacgcggt ccaatgttat ccggtatgcc ctgtgcgggg tgtgcgatca aagtggcgac
    12001 gtgggtcatg tgacgcgagt agcggggtga gcgtgcgcgg ggccgaatgc agggccgagt
    12061 accaccatgc aagacaacgc acgtgagaag gttgcggtgc ttatcgcagg gccgactgcc
    12121 agcggcaagt cggcgcttgc gcttgcggtg gccgagcgca tcggcggcat cgtggtcaac
    12181 accgactcga tgcaggttta tggcgacctc gcaatcatta cggcgcggcc gggcggcgcc
    12241 gagttggcgc gcgtgccgca cctgctctac ggacatgtgg acgccgcgga aaattattcg
    12301 gttggccggt ttctgggcga tgcggccgcg gcgcttgaag ctgcgcgtgc cgaacgtcgg
    12361 atcccgatct ttaccggtgg cagcgggcta tatttcaagg cgctcaccgc cggactcgcc
    12421 gcaatcccgc ccgtgccgcc ggaaattcga gccacggtgc gctcaaggct cgaagcgtcc
    12481 gggccggtgg cgctccatgc agaactctcg cgccgcgatc ccgttatggc ggcgcggttg
    12541 cgccctgcgg accggacccg aattgcgcgc gcgctcgagg ttgtcgaggc aaccggacgc
    12601 tcgattgtgg attggcagca gaagggcatg ccgccgctgc tcgatatcac ccgcattgca
    12661 aagatctttc tcgcgcctga tcgcgcagcg ctgttcggtc ggatcgacac gcggttcgat
    12721 gccatgctgt cggctggcgc ccttgatgag gtgcgggcac tggcggcgcg acgtcttgat
    12781 ccgctgttgc ccgccatgaa ggcccacgga gtgccgtggt taatccgcca tctcggcggc
    12841 gaaatatccc tcgccgccgc cgccaccgag gccaaaaagg atacccgcca ctacgccaag
    12901 cgccagttca catggttccg ccatcagctt gccgactggc ctcgtgtcga tccggcggtt
    12961 gcgtgcgatg tgctcatgcg taacatcggt cgctgagcta cctcggaacg cgatagaaca
    13021 gttcgtaaaa cgcaatcaat atctcgacta cgatcaggat cgcgatgacg aattcaagcc
    13081 gcgcgctgcg ctcggtgtcg atgatgtcgg tcagggcgcg agtggtttct tcaatgacct
    13141 ggagcttgtg gcgcagcgca atcgcccgtt ccttgagttc gtattcgtct tcaaggcgag
    13201 cataaagccg ttcgaggtca ctgcgatccc acagcacgtc cggcttttcc tcgatcgcga
    13261 tgcggccgga catgcggtga tgaaccagca gtgcttggcc gatgagccgc agcatgttgc
    13321 ggcgattaaa gggggcgcga ccggtggcgg cgagtcggct cgcaaacggt tcgatcagct
    13381 cgagaacctt gttaacctcg cgttcgtcgc gcaccaagcc gacgtttttt gccagcacgt
    13441 cggctatcac caggagccgt ggcggcgtca gatccttcac cgaaatcgga ccgccgatga
    13501 cgatctgatc gtcgcgctcg ggcgcgattt cgatggtcgc aacctcgtcc tcgatctttg
    13561 cagaaggggc cgtcacgcgt gcccggatgc cgcggag
//
LOCUS       DATILV010000125         7618 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2074731, whole genome shotgun sequence.
ACCESSION   DATILV010000125 DATILV010000000
VERSION     DATILV010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7618
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2074731"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..306)
                     /locus_tag="VLJ17_02830"
     CDS             complement(<1..306)
                     /locus_tag="VLJ17_02830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21943.1"
                     /translation="MGNPSNQCWPEPPPFIYKQALVLILQQPDTITMVYSGNMDVRRV
                     RMNQPHKDTPALYGDSVGHYEGDTLVIDTVGIRTDRKYAMIDLFGTPYTKALHMVERY
                     "
     gene            complement(1035..1238)
                     /locus_tag="VLJ17_02835"
     CDS             complement(1035..1238)
                     /locus_tag="VLJ17_02835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21944.1"
                     /translation="MSKEAMRQESERLVREALARNVTITQGKTRLDVKCGRCGAPNRV
                     SAEVDHGRVEYVCKECGHKQKTL"
     gene            1653..3098
                     /locus_tag="VLJ17_02840"
     CDS             1653..3098
                     /locus_tag="VLJ17_02840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV21945.1"
                     /translation="MSIAIHVSCDAAAARAVKAEANPQHPDLILATTVCASSLAFIDG
                     SVVNVGLPAIGRELAADAGALQWVVNAYLLPLSALLLLGGAAGDRYGRRRLLIFGTSL
                     FALASIGCTIAPGLVGLLGARLMQGASAAVLMPNSLAILGQTFAGEAKGRAIGIWAAA
                     GAAAGAIGPVLGGWLIDLGSWRAIFLLNVPIAAGAILLAWRYVPPDADDDGKALDVRG
                     GVLATLGLGALTFALTIGSGPSGWTTPAIVSVGAAVALLIAFVAAEKQRGDGAMMPVG
                     LFASSDFIGLTLLTLFLYGALGALFVLIPYMLIDAGGYLGTAAGAALLPLPLLLAVGS
                     PLMGRLAAKIGPRLPLSIGPLVVAAGFLLAFRIGLSANYWTDVMPAILVIAIGMSGAV
                     APLTTAVLSSVEARHTGSASGFNSAVARTGGLIATALLGSVLAAQGEQLIASFRVAML
                     AGALACVAASISAFMLLGGNVRNTEGRAAVK"
     gene            3488..4231
                     /locus_tag="VLJ17_02845"
     CDS             3488..4231
                     /locus_tag="VLJ17_02845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21946.1"
                     /translation="MAGEKNVVFRYNLKTRSQESVYEIRGDQATIWFNLSCFSSHRWA
                     LYVERVVNNAHLRHWVLVDWKDIRNPTETETEIGLARINPADCLTDTDVLPAEPIRVA
                     FDKQRNRFFGYTTPRGFNGPVQAGWLGRLGEKLVVQSTVKLPAGPWVQGHSFFKSLSC
                     FSCGCDCYSFFNVYVGNDRVFAMVWGRGVADGQSGIYELVKSSQEVNWKKLVAEQSET
                     TANMVFSPDGCKVAYSFGMAVTLLEVCSR"
     gene            complement(4829..5734)
                     /locus_tag="VLJ17_02850"
     CDS             complement(4829..5734)
                     /locus_tag="VLJ17_02850"
                     /inference="COORDINATES: protein motif:HMM:NF015210.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF262 domain-containing protein"
                     /protein_id="HSV21947.1"
                     /translation="MPPCSGQSKNKALTAAKPVPIGASSGRAPESSVDRIEELAGRVL
                     RGDILLPKFQRDFVWERHQIIDLLDSVANNYPIGSVLLWRSHEKLRSERNIADLEIAP
                     TPHGYPVNYLLDGQQRLPTICVALYSHGADSHSRWNLAYDLRDKKFVHLDSLDDPPLQ
                     LIRLNKITDASAYFQHVAGLKTLGAADVQPLEARAKELFDRFKDYKIATVTLHEMSIQ
                     AVAPIFERINSRRITTGVASKLSAALRSTFLSNIGREAELPQQNDLEVCRGSVLQHAR
                     MRLLVTLQKDCRSFVRECDVLRSTN"
     gene            complement(5845..6270)
                     /locus_tag="VLJ17_02855"
     CDS             complement(5845..6270)
                     /locus_tag="VLJ17_02855"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: protein motif:HMM:NF009084.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HSV21948.1"
                     /translation="MNQISQHPHTTSHDIAPRDGRIAYIQSCWHKEIVDQCRAAFVVE
                     LRRLGRPEHLTDFFEVPGAFEIPLQAKLLARTNRYVAIVAAGSVVDGGVYRHEFVSDA
                     VISALMRVQSETDVPIISAVLTPQRFCYQRREFHPKPSD"
     regulatory      complement(6354..6504)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            complement(6926..>7618)
                     /locus_tag="VLJ17_02860"
     CDS             complement(6926..>7618)
                     /locus_tag="VLJ17_02860"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HSV21949.1"
                     /translation="VVAAGMMIAAAVLPAAAADLPVRAPIAPLAVPTYNWTGLYLGLN
                     GGGGWGSQDPLNIITDRFDSLGTNISGGMFGGTVGAQVQVSHVVMGLEADLDWADITG
                     SRTITPSIFGVPLGTFNASTKLDWIGTARARAGYAQDNWLFYVTGGATLAEAKTNLTG
                     VNGSVCGIANEPFCSGSGRKVGAAAGVGVEWGITPNLSAKLEYLHMTAISTDVSRIDS
                     VRLGLNYRFGGF"
BASE COUNT         1485 a         2200 c         2288 g         1645 t
ORIGIN      
        1 atagcgttcg accatatgca gagcctttgt atatggcgtg ccgaacaggt cgatcatcgc
       61 atatttccgg tcagtcctga tgccgacggt gtcgatcacc agcgtgtcgc cctcgtaatg
      121 gccgactgaa tctccgtaca aggccggcgt gtctttgtga ggctggttca tgcgcacgcg
      181 gcgcacgtcc atgtttccgc tgtacaccat cgtgatggtg tccggctgtt ggaggatcaa
      241 cacaagggct tgcttgtaga tgaacggcgg cggttcgggc caacattggt tcgacggatt
      301 ccccataggt gatgcccgcg cgcgacattt cgccgaactt cttgacgact tccgccgccc
      361 aaggctgcaa gatcggattg gtgtagtccc cgacgagctg gtcatagtcg ctgatgccgt
      421 cttccccgtc cttaagcgga ggcagtgcca atgtgccggc ctctaccagc gaaccgaaca
      481 cccggggcca gcgtaccttg ttcgtcaccg gtccgggacc ggaggccggc ggctcgaacc
      541 agggaaaggc cggatgattc cacatcccgg taaagtccgg gatcgatgcg gtaccgtttg
      601 ttgcggtgct ggcctgcgta acgggcgccg tttgtgccag ggcgggcgtc tcagccatcc
      661 acgctagtgc gaggaatcca aggaaattgc actgtctgtt catgccaacc tccctttcgt
      721 ggttgcgaaa tcattaggtg ctcgcatggt cgcccggatc ggatgaaatc ttgaagtgcc
      781 gccgcgcaca cccgccctgt cggtcattga cgggcttttc aagcttaaac catctttgcg
      841 cgcctccgga aggaggctgc aatatttccg caccggcctg ccgacttgcg cggcgcacca
      901 aagtcgtcag ctgtctgaag tactaccgac gtgccagtcg aacgtccgcc atagccgttt
      961 ttgacccaaa cgggccattt gctcgcgcac tgagttgcag acgcgattga ccaaagaccc
     1021 accgggtctt ctggtcacaa ggtcttttgt ttatggccgc attccttgca gacgtattcc
     1081 acccggccat ggtccacctc cgcgctaacg cgattgggcg caccgcacct accgcatttc
     1141 acgtccagcc gggtcttgcc ctgcgtgatg gtcacgttcc gtgccaacgc ctctcttacc
     1201 aggcgttcgg actcctggcg catagcttcc tttgacatcg caggcgctcg cggtttccgc
     1261 accatcaatt cccctcctcc gaagaactcg gtctctagcc tacttttcca ccgcgcccaa
     1321 accgcttcct ttcccctccg cttggggtcg aacgtctcaa ccacgaatcg ccgcataaac
     1381 agatcgagcg tgctcatgca tctacgatgc aatataccgc gtaccactgg cgttgtgctc
     1441 cccgcgggca aaacgacagt gcggcaagcc ccacgcgacc gaagccgtcg tggcccgtgc
     1501 ctaggcggcc accgcacgcg gaaagacacg acgcaggact gatcaggcat tccgtaagcc
     1561 gaaaagtgac cggcgatacg aatgttgcgg gagtgttgca atccggacac ttctggtaga
     1621 tcttcgggcg cgcgaagcgg gaaaacacgt ccatgagtat tgcgatccac gtttcatgcg
     1681 atgcggctgc cgcacgcgcc gtgaaggcgg aggcaaatcc acagcatcca gatttaatac
     1741 ttgcgacgac cgtctgcgct tccagcctag cctttatcga tggttcggtg gtcaatgtcg
     1801 gcctgccggc gatcgggcga gaactcgccg cggatgctgg cgcgttacaa tgggtggtca
     1861 acgcctacct gctgccgctg agtgcacttc tgctgctcgg aggggccgct ggcgatcggt
     1921 acgggcgccg acggctgctc atttttggaa cctcgctgtt cgcactcgcc tcgattggtt
     1981 gcacgatcgc gcctggcctc gtcgggctgc tcggggcgcg gctgatgcaa ggcgcaagcg
     2041 ccgcggtgct gatgccgaac agccttgcga ttctgggaca gaccttcgcg ggcgaggcca
     2101 agggccgagc gatcggcatc tgggccgccg cgggcgctgc cgcaggtgcg atcgggccgg
     2161 tgcttggagg ttggctcatt gatctcggca gttggcgcgc gatttttctt ctcaatgtcc
     2221 cgatcgccgc tggcgccatt ctgttggcgt ggcgctacgt cccgcccgat gcggacgacg
     2281 atggaaaagc gcttgacgta agaggcggcg tcttggcgac gctcgggctc ggtgccctga
     2341 ccttcgcact caccatcggt tccggcccca gcggctggac aacgccggcg atcgtttctg
     2401 tcggcgcggc cgtcgccttg ctgatcgcgt ttgttgccgc cgagaagcaa cgcggcgacg
     2461 gcgccatgat gcccgtcggt ctgttcgcct cgagtgactt tatcggcctg acactgctca
     2521 ctctatttct ctacggtgcg ctcggcgcgt tgttcgtgtt gatcccttac atgctgatcg
     2581 atgccggggg ctatttgggg acggccgcgg gcgccgcgct gctgccgctg ccattgttac
     2641 tcgccgtcgg atcgccactc atggggaggc tggccgccaa gatcgggccg cggcttccgt
     2701 tgtccatcgg tccactggtg gtcgccgcgg gcttcctgct tgctttccgc ataggtttgt
     2761 ccgcgaacta ctggacagac gtcatgcccg ctattttggt gatcgcgatc ggcatgagcg
     2821 gcgcggtcgc gcccttgacg accgcagtcc tgagttcggt cgaagcccga cataccgggt
     2881 cggcctccgg gttcaacagt gccgttgcac gcacgggagg actgattgcg acggctcttc
     2941 tcggatcggt cttggcggcg cagggagagc agttgatcgc ttcttttcgc gtcgcaatgt
     3001 tggcaggcgc gttagcctgc gtggcagcat ctatcagcgc gtttatgttg cttggaggaa
     3061 atgtcagaaa caccgagggt cgagcggccg tcaagtgagc gaagagtctt tcagttcatg
     3121 gcgcctgatc ctgctgcacg cccaccttga ccttctgcac ttggcccgag gccgaaacgc
     3181 ctgatcaacc cgagcatttg cgttcattag ggggagagcg gccgatgttg gcccctcggc
     3241 gattttccgc gctactgacc ccaaacggtc atcgatctta tcggaaaagt cgaatatcaa
     3301 tgattcggct ttcgcgaaat tgggaagcgg tcatgggtgt ccgtggcaaa gtcattgccg
     3361 gctgcctctt cgcagctcta gtagctcttt tctttgcgtg gcacgctccg cagcaatctg
     3421 ggctacaacg ttcaattacg acgacgcttg cggctctccc ttgctatggg tcgacgagga
     3481 tacgttgttg gcaggcgaaa aaaacgtcgt gtttcgctac aatttgaaaa cgaggtcgca
     3541 ggagagcgtt tacgaaattc gtggcgacca agcaacgata tggtttaact tatcgtgctt
     3601 cagcagtcat cgttgggcat tgtatgtcga gcgagttgtc aacaacgcgc atttacgaca
     3661 ttgggtgctc gtcgattgga aggatatacg aaatccgacg gagaccgaaa cagagattgg
     3721 gctcgcacgg ataaatccag ccgactgcct cacagacacg gacgtgcttc ctgctgaacc
     3781 gataagagta gcctttgata agcagcgaaa tcgtttcttt gggtacacga cgcctcgggg
     3841 attcaacggg ccggttcaag cggggtggct tgggcggctt ggagagaagc tggtggttca
     3901 gtcgaccgtt aaattgccag cagggccgtg ggttcaaggg cacagttttt tcaaaagctt
     3961 aagttgcttt tcgtgcggat gcgattgcta ctcatttttt aatgtatacg tgggcaacga
     4021 tcgcgtgttc gccatggttt ggggcagagg tgttgcagac gggcagagcg gaatctatga
     4081 gctcgtcaaa tcgtcccaag aagttaattg gaagaagctg gtagccgagc aatcagaaac
     4141 aacggcgaac atggtctttt cgcccgacgg ctgcaaagtc gcatattcct tcgggatggc
     4201 agttaccttg ctggaagtgt gttcccgata gccgatgctc ggcggcggca aagggtacgt
     4261 agcgtgcccg ttttcggctt ttggcccgac ggagaccccg aggaatgtct gctgcgaccg
     4321 ccgctgttcc ggggataagc ggacgaggcg cgatgggacc gaaaacaacg tgattggccc
     4381 cgtgcgggag ccgtcccggc ctcgaatctt cccagcccgc cgtcggatga tggcccctag
     4441 agaaactgga gttggggcag taggctccct ggattgccct ggaagacctc agggcggaca
     4501 tcaggcggtg cagtgtcaat gaccgatcgg acccaacgaa ttgcgatttg tcacctgttg
     4561 ctgcggggag cccggtggat gcccgtgagc gtgaacagaa agctcggccc aaatgaccgt
     4621 tgtgccccgg gcggggcggt tatcagcgca gttctctgcg cagtcgttga gggagatgca
     4681 gtcgttggat gggcggagaa ctccggattc atggctagag aaatcggaac ggatggcact
     4741 ctagctccgc tagatctcac gcctgcggct ctggcattga acgcacggta cttcgatgca
     4801 agcgcagccg cagcaggagc tgttggtgtc agttcgttga tcgcagaacg tcgcattcac
     4861 gaacaaaaga ccggcaatct ttctgtaggg ttacgagaag ccgcattcgt gcgtgctgaa
     4921 gtacagatcc tcgacaaact tcaaggtcat tctgttgtgg gagttctgct tctcgaccaa
     4981 tgttagaaag gaaagtgctg cgcagagcag cgctcagctt tgaggcaact cctgtcgtaa
     5041 tgcgtcggct attgatgcgc tcgaagatcg gggcaaccgc ttggattgac atctcatgaa
     5101 gcgtgacagt cgcgatcttg tagtccttga aacgatcgaa aagctctttc gcgcgagctt
     5161 ccaagggctg cacgtcggca gctccaagcg ttttcaggcc tgctacatgc tggaaatagg
     5221 cggacgcatc ggtgatcttg tttagtcgga tcagttgcaa tggcggatcg tcaaggctgt
     5281 cgagatggac gaatttcttg tctcgcaggt catacgcaag gttccaacgg ctgtgcgaat
     5341 cagccccgtg cgaatagagt gccacgcaga ttgtgggtag acgctgctga ccatccagca
     5401 agtagttcac ggggtatccg tgtggggtcg gtgcaatttc gagatcggca atgtttctct
     5461 cgctgcgcag cttctcatgg ctgcgccaca acagcacgct gccaatcgga tagttatttg
     5521 caacactgtc cagcaagtcg atgatttgat ggcgctccca aacgaagtcg cgctggaatt
     5581 tgggaaggag gatgtcgcca cgcaaaacac gacccgcgag ttcttctatc cggtcaacgc
     5641 tggattcggg agctcggccc gaactagcac caattggcac aggtttcgca gctgtcagag
     5701 ctttgttctt tgactggccc gagcacggcg gcatgcttga tcggtcgggt gccgcaggct
     5761 gccactaccg agccacagcg cgcgccccac caccacacaa gcattacgaa gggcgtcaaa
     5821 aagggcgcgc aatcaccgcg aatttcaatc cgatggtttt ggatgaaatt cacgccgctg
     5881 gtaacaaaaa cgctggggcg tcaacactgc ggagatgatc ggcacgtcag tttccgattg
     5941 tacgcgcatc aatgcgctga tgaccgcgtc ggagacaaat tcgtgccgat agacgccgcc
     6001 atctaccaca gaacccgcgg cgacgatcgc aacgtagcga ttcgttcgcg cgagtagttt
     6061 ggcttgcagc gggatttcga acgcgcccgg cacctcgaaa aagtcggtca aatgctcggg
     6121 tcgaccgagc cggcgaagct ccacgacaaa tgcggcccgg cattgatcga cgatctcctt
     6181 gtgccaacac gattggatgt aggcgatccg tccatcacgt ggagcgatgt cgtgcgaggt
     6241 agtgtgaggg tgttgcgaga tctgattcat ggttgtcctc aaaagttgag accagaatca
     6301 ggacgtacgg gcacgctcca atggtccgcc gaagcggatc gtcgccgagc ttgtcccgtt
     6361 ctctttcatc cggactgtta ccgtcggcct cggagttgca ccgagtctgc tgccctgccg
     6421 gtttaagccg gcgggcgctc gcgggctctg cgatttcgcg caattagcgc cggtggggac
     6481 ttccaccccg ccctgagaac gaacgccgcc cgatgcttcg tggcggccag actgaaatct
     6541 ccgcggaggt caattacgcc agatcagcgg ctcggatgcc atgtccgcac gaccgccaat
     6601 tcgctacacc gcagcggcgc agccggctgt ctgggcgggt gcttgacgtg ggctccggcg
     6661 tcggagggcc ctcgcactat ctcgcaaaga ggaatgctta gcgcttcgtt cgctcacaaa
     6721 cgagtggctg cgtcgagcag tagcattcct ctatttgatt agcgactgag tggcaaatcc
     6781 tgatgccgcg agacgtaaat cagcctggaa ccgcaaagga aagcggatac aaaaaaggat
     6841 cggtccgctc tgcgcataac cgatccattg gcaaggctga gccgcggccg atgagccgcc
     6901 ggtcagccgg agatagaaag agtgattaga atccgccgaa cctatagttg agacccagcc
     6961 ggacggaatc gatccgcgaa acatcggtcg atatagccgt catatgcagg tattccagct
     7021 ttgcgctgag attcggggtg atgccccact caactcctac gcccgcggcg gcacccactt
     7081 tgcgacccga gccagaacag aagggctcat tagcgatgcc gcacacagat ccgttcactc
     7141 ccgtcaggtt ggtcttcgct tcagctaacg tggcgccgcc ggttacatag aagagccagt
     7201 tgtcctgggc gtatccggcg cgggctctcg cggtaccaat ccagtccagc ttggtggatg
     7261 cgttgaatgt cccaagtgga acaccgaata tgctcggtgt aatggttctc gatcccgtga
     7321 tatcggccca atccaagtcg gcttcaagac ccatcaccac atgggacact tgcacctgtg
     7381 cccccacggt cccaccgaac attcctccgg agatgtttgt accaaggctg tcgaatcgat
     7441 cggtgatgat attcagggga tcctgcgagc cccaaccgcc gccgccattc aaaccgagat
     7501 atagccccgt ccagttgtat gtcgggaccg ctaggggtgc tatcggcgcc ctcaccggaa
     7561 gatccgcggc cgcggcaggg agaactgctg cggcgatcat catgcctgct gctacgac
//
LOCUS       DATILV010000126         1813 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1818718, whole genome shotgun sequence.
ACCESSION   DATILV010000126 DATILV010000000
VERSION     DATILV010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1813)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1813)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1813
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1818718"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(257..1607)
                     /locus_tag="VLJ17_02865"
                     /pseudo
     CDS             complement(257..1607)
                     /locus_tag="VLJ17_02865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007677524.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1380 family transposase"
BASE COUNT          325 a          625 c          553 g          310 t
ORIGIN      
        1 gggcggttaa tctgcgtcaa tcgtcactta agacgacatt tcccggatag gagcgctttt
       61 ggtgccttcg gacaatacgt gcaaccacgt atacgaagaa ccgggtgaat gcagacgcaa
      121 ccggcatccc cgctaccggt gccaggcgcc gccagagctg tgagtagctt gcctcgcggg
      181 ggtggcgacc gctggtttgc cttcatcaag gcgcacctca gccttcgttg cccgtcgcat
      241 ttgatcccgg gccctctcac gctggtgcgg gcgacgcccg caaccgggca atgagcgaca
      301 ggatctcctg gaacatctgc cgcgacaccg cgacctcggc catctggaag gtcacatacc
      361 ggccgtggct gacgaccttc gcgccgatct tgatcagctt ctcgcgcaag ctggtcagcg
      421 accacggctc cgccgtcttc ggcatggcca gcgtccgcat gaaattgccg aggttatagg
      481 cgagggcatg aagctgaagg cgtacggaat tcgcggcgaa ggatcggcac gacagccgtg
      541 tccacttgac cgcgcccttg ccctccttga tgtactgctc gcaggtgccg cggtggttgt
      601 agaaggcgac cacgcgctcc gctggacgcg ccaggttggt gacgatgaag ccgacccgcg
      661 gataaagctc gccggggtgc cactcgacct tggccaccac tcgccggggc ttgctccatg
      721 agccggcccg gtagctgaag ctggaatagt agcggcgcac ctcctgcggc ggtcgcccga
      781 ccgggcgctt caacaggtag ccgatcttgt cctgcaacac ccggttggcc ggcagacgga
      841 tcgcataacc cattccttcg gcttcgagga actcgtagat ctccgggttg gcgaaggccg
      901 cgtcgccgcg aaaatagagg cgcttcgccg tgccccggta gcgggcgatc accggctcca
      961 gcaccgcgcg ccagccctca gcgctgtgca cgttgcccga acgcagcgca caccgctcca
     1021 gatcgccgag ttggttgaac acgaacagcg ggtgatagca ggtgcacccg aaatggccgt
     1081 tgtaggtgct gccttcctgc tcgcccatag gtcgggctct cgctcgaatc catgtcgagc
     1141 acgacgaccc gcggctgacg ccgctggtgc accgcgtcga tccactggcc cggcagatca
     1201 gcgagggcgg cgaggttcac cggacgggtc agccattcgg tctcgaagcg ccccatctgg
     1261 ctggccgagg ccgcccgacc catcggcgct ccgccgccga ctacccaacg catcgccgga
     1321 tcgcgacaca accgctcggc gtcgttcacg tcctcgtaac cggccagccg cccgaatacc
     1381 gactgccgca gcaatccgac caacaggtgc cgccggttct tgccggtgcg tgcctccgcc
     1441 aatctctcgc caccgcttgc ggtcagagcg agcgcgtcgt ccagttcgcg ataggcgagc
     1501 aatccgccat cggaggtgat cacggaaccg cggaaccgaa gcatcaggcg gcggtcgaaa
     1561 tcgagcctca gcgcgcccct gtccgcttca cccgccgggt ccgccatcgc cgccccgttc
     1621 gatctcgcac aacatgttgt atcttatacg ataatcagga ccattgcgcc gcaaaatacg
     1681 gtatcatccg gggaatccgg gctggttcgc cggtggcgcc gagctcccgc agcgccgtgg
     1741 ctgcggctcc gagcgtaggt tcgcgcgaga tcaaccaaat tcccccgatt atcagcccgc
     1801 catagaacac aag
//
LOCUS       DATILV010000127         5215 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2074920, whole genome shotgun sequence.
ACCESSION   DATILV010000127 DATILV010000000
VERSION     DATILV010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5215
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2074920"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            105..2237
                     /gene="uvrC"
                     /locus_tag="VLJ17_02870"
     CDS             105..2237
                     /gene="uvrC"
                     /locus_tag="VLJ17_02870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HSV21950.1"
                     /translation="MQKKNIEPDIELKDDEEDAQLPDLPDDGGLDLAVPPDAGVGAGR
                     NVISEFAKHAPRAPGVYRMIGASGEVLYVGKAKNIRKRILSYARPTGQVTRIARMVAI
                     TASIEFVTTATETEALLLEANLIKRLRPRFNVLLRDDKSFPYILISNGDRPAQILKHR
                     GARNRAGDYFGPFAAVNAVNRTITALERAFLIRSCSDAVFDSRTRPCLLYQIKRCSAP
                     CTHEISRPAYEELVREAKAFLSGKSRVVKEELAREMDRAAEALDFERAAVLRDRLAAL
                     AAVQARQDINPRDIEEADVFAIFQDGSFFCIEVFFFRSGQNWGNRAYFPRADRSLGLG
                     EVLGAFLAQFYDDKPCPRLVLLSGDIEERELLAQALTAKSDHKVDISVPRRGAKRDII
                     EHALANAREALGRKLAEAASQQRLLAALAGSFGLAAPPRRIEVYDNSHIQGTNAVGAM
                     IVAGPEGLRKNQYRKFNIKAANITPGDDFGMMREVLNRRFKRLINEAPRADNPPLEGE
                     GRTTKGGPGWSAARAVPSPPGDDPPRDAETPTPSPRGADERSPSDDKDAEQPWPDLVL
                     FDGGEGQLGAARETLAGLGIANIPLVGIAKGPDRDAGRETFYMADREPFRLPPRDPVL
                     YFVQRLRDEAHRFAVGSHRQRRARDIREAGLQEIAGIGPARKRALLRHFGTLKAIERA
                     SISDLSQVPGVNAETARRIYDFFHETAD"
     gene            complement(2240..>5215)
                     /locus_tag="VLJ17_02875"
     CDS             complement(2240..>5215)
                     /locus_tag="VLJ17_02875"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HSV21951.1"
                     /translation="LEWRKQEADARKELQSIAEIGARAVDTYFDVLQRSLKGLVDTLP
                     EVRQHDIDSAEFKSRAHDVIAVFHATHPELTNVVLIRADGQVIVAANRPFNAPSVSVA
                     EQPSFKNYLNTFHWETDIGRPMYGSVAKEWVVPVRFSVVDGSANLLYFIGASVPVDFI
                     ANFWRDASIVSKASLGVFRDDGYLLSRYPNPELSDEVELYGSPRTGGFMIYLRENEFP
                     HSGFTTGVASADGTKNVLAFRRLLHFPVTFFVIMPMQELWKTWWLDARVSLTLTLILL
                     LGGIAASVLFARVQNANNGALHQALELSKRIAGERDIAINSMTQGLCMFDANQRLIIC
                     NKQYRDLYKLTEEQVKIGATLRQILKSRSTRGMTPEEEAKYIERRVAQLSKVDPHSIT
                     NQLNDGRFIYVVHQPMQGGGWVATHEDVTEKRKVEVEQHRAKAFSDTIVQNIPMPIVI
                     KDAASGKFILVNKAFEAFVNLPREKIIGQTVFELYAQEAAAKMQALDLEAMSAENPLH
                     SNEISAETKAKAQLFIRTIRLVVRDNEQQPQYLIVLIDDITERRKAEAKIEQLAHYDA
                     LTNLANRNLFKKRIDESLEKLERLGVEFAIFLLDLDRFKVVNDTWGHQTGDALLKKVA
                     DRIRATINQVDIAARLGGDEFALIVVLGEDASPEALASLAKRLIDSISAPCEIDGHPV
                     AVGCSIGIAFAPAHGSRSDELLKNADLALYKSKSAGRDCFHVYTDEFRTEADRRNALE
                     NDLREAIWRGDLDLYYQPVIDITNGRIRAVEALVRWRHETKGFIAPSEFIPLAEEAGL
                     IIQLGQWVLIKACQDAMKMPDEIKVAVNLSPVQFTKSNLVDAVIFALADSQLPPKRLE
                     VEITEGVLFEETEQNLETLRQMKSAGISIALDDFGVGYSSLSYLTAFPFDKVKIDKSF
                     VDKLDRIESRAVMSSIVQLSQSLNLAVVAEGIETGEQLVGLRALGIELGQGFLFSKAV
                     PLDELEFKSFDVSAKSEAA"
BASE COUNT         1121 a         1530 c         1438 g         1126 t
ORIGIN      
        1 tcacggggga gaccatcgcg gtggatggcg gccagcatct cagttggcag gccatcaggg
       61 gcgagtgcaa cgaggaatag gattttgcag cccggcaata cgacatgcag aagaagaaca
      121 tcgaacccga catcgagctg aaggacgacg aagaggacgc gcagcttccc gatctgcccg
      181 atgacggcgg ccttgatctt gcagtgccgc ctgacgccgg cgtcggggcc gggcgcaacg
      241 tcatctcgga gttcgccaag cacgcgcccc gggcgcctgg ggtttaccgc atgatcggcg
      301 cctcgggcga ggtgctctat gtgggtaagg ccaagaacat caggaaacgt atcctctcgt
      361 atgcacgccc gacgggccaa gtgacccgca ttgcccgtat ggtggcgatc acggcttcga
      421 tcgagttcgt caccaccgcg acggagaccg aggcgttgct gctcgaggcg aatttgatca
      481 agcgactgcg gccgcgtttc aacgtgctgc tgcgcgacga caagtcgttt ccgtatatcc
      541 tgatttccaa cggcgaccgg ccggcgcaaa tcttgaagca tcgtggcgcg cgcaatcgcg
      601 cgggcgacta ttttgggccg ttcgcggccg tcaacgcagt gaatcggacc atcacggcgc
      661 tggagcgcgc gttcctgatc cgctcctgtt cggatgcggt gttcgacagc cgtacccggc
      721 catgcctgct ttaccagatc aagcgctgct cggcaccatg cacgcacgag atatcgcgtc
      781 ctgcctatga ggagttggtg cgtgaggcaa aggcgttcct gtcgggcaag agccgtgtcg
      841 tgaaagaaga gctggcacgc gaaatggacc gcgcggccga ggcgctcgat ttcgagcgcg
      901 ccgcggtgtt gcgcgaccgg ctggcggcgc tagcagccgt gcaggcgcgc caagacatca
      961 acccgcgtga catcgaagag gcggatgtat tcgcgatttt ccaggacggc agcttcttct
     1021 gcatcgaggt gttcttcttt cgctccggcc agaattgggg taaccgcgcc tatttccccc
     1081 gcgccgaccg gtcgctcggc cttggtgagg tgctgggcgc atttctcgca cagttctacg
     1141 acgacaagcc gtgtccgcgc ctcgtcctat tgtccggcga catcgaggag cgcgaattgc
     1201 ttgcacaagc gctgaccgca aagagcgacc acaaggtcga catcagcgtg ccgcgtcggg
     1261 gcgccaaacg cgatatcatc gaacacgcgc ttgccaatgc ccgcgaggcg ctcggccgca
     1321 agctggccga ggcggcctcc cagcaacggc tccttgccgc gctcgccggt agcttcgggt
     1381 tggcagcgcc gcctcgccgc atcgaggtct acgataacag ccacatccag ggcacgaacg
     1441 cggtcggtgc catgatcgtc gccggaccag agggcttgcg caagaatcaa taccgcaagt
     1501 tcaacatcaa agccgcgaac atcacaccgg gtgacgattt cggcatgatg cgcgaagtgc
     1561 tgaatcgacg attcaagcgg ctcatcaatg aagcgccgcg cgctgataac cctccgctgg
     1621 agggggaagg tcggaccacc aaaggtggtc ccgggtggag cgccgcccgc gcggtccctt
     1681 cccctccagg ggacgaccca ccgcgtgatg cagaaacgcc gacgccctct ccaagggggg
     1741 ctgatgaacg ctccccatcc gacgataagg acgccgagca gccatggcct gaccttgttc
     1801 tcttcgatgg cggtgagggg cagcttggtg cggcgcgcga gacgctggcc gggctcggga
     1861 ttgcgaatat tccgctggta ggcatcgcca aggggcctga tcgcgacgcc gggcgcgaga
     1921 cgttctacat ggcggaccgg gaaccgttcc gcctacctcc gcgcgatcct gtcctctatt
     1981 tcgttcaacg cctacgcgac gaggcccatc gatttgctgt cgggtcgcac cgtcaacgcc
     2041 gtgcccgcga cattcgcgaa gccggattgc aagagattgc cggcatcggc ccggctcgca
     2101 aacgggcctt gctacgccat ttcggtacgc tcaaagccat cgagcgggcc tcgatttccg
     2161 atttgagcca agttccgggt gtcaacgccg agaccgcccg ccgcatatat gacttttttc
     2221 acgaaaccgc ggactagagc tacgctgctt cggatttggc cgatacatca aacgacttga
     2281 actcgagctc gtccagcggc accgccttgg aaaagaggaa tccctggcca agttcgatac
     2341 ccaacgccct taatcccacg agctgctcgc cggtttcgat cccctctgcc accacggcca
     2401 aattgaggga ctgtgacaat tgaacgatcg atgacatgac cgcccgggat tctatccgat
     2461 caagtttgtc aacgaatgat ttatcgatct tgaccttatc gaaggggaat gccgtaagat
     2521 aagaaagtga cgaatagcca accccaaagt cgtcgagtgc aatcgatatg ccggcactct
     2581 tcatttgccg cagcgtttcg agattttgtt cggtctcttc aaatagcacg ccttcggtga
     2641 tttcaacctc aaggcgcttg ggcggcaact gcgaatccgc cagcgcaaaa atgaccgcat
     2701 cgacgaggtt tgatttagta aactgcaccg gggacagatt taccgccact ttgatttcgt
     2761 caggcatctt catggcgtcc tgacacgctt tgatcagaac ccactggcct agctggatga
     2821 tcagcccggc ttcctccgcc aacggtataa actcactcgg cgcgatgaac ccttttgttt
     2881 cgtgtcgcca tcgcaccagt gcttccacgg ccctaatccg cccgttggtg atgtcgataa
     2941 caggctggta gtacagatcc aaatctccac gccaaattgc ctcgcggaga tcattttcca
     3001 gggcgtttcg ccgatcagcc tccgtcctga actcatccgt gtaaacgtga aaacaatcgc
     3061 gtcccgcact cttggactta tagagcgcaa gatccgcgtt cttcaaaagc tcatcgcttc
     3121 gactgccgtg cgcaggggca aacgcaatcc caatgctgca tccgaccgca accggatgac
     3181 cgtcgatctc acagggcgcg cttatggaat caatgagccg cttcgccagc gaagccaagg
     3241 cttccggcga ggcgtcctca ccaagcacca caatcagggc aaactcgtca cctcccagtc
     3301 gggcggctat atcgacttga ttgattgtgg ctctgatccg gtcagcgacc tttttaagga
     3361 gcgcatcacc ggtttggtgc ccccacgtgt cgttgaccac tttgaatcta tcgagatcga
     3421 gcaagaaaat cgcgaactcg actccaagtc gctcaagctt ctccaacgac tcatcgatcc
     3481 gctttttgaa gaggtttcga ttggcgagat tcgtaagcgc atcataatga gcgagctgct
     3541 caatcttggc ttccgccttt cttcgttcgg taatatcatc gatcaggaca atcaaatatt
     3601 gaggctgctg ctcattgtcc cgaacgacga gtctgatggt tcgaatgaaa agctgcgcct
     3661 tcgccttagt ctctgcagag atctcgttcg aatgcagtgg gttctcggca ctcatagctt
     3721 cgagatcaag agcttgcatc ttggcagccg cctcttgggc gtacagctcg aagacagtct
     3781 gtcctatgat tttttccctg ggaagattga cgaacgcttc gaaagccttg ttcactaaaa
     3841 taaattttcc agatgctgca tctttgatga cgatcggcat cggaatgttt tggacgatgg
     3901 tatccgagaa agccttagcg cggtgttgct ctacttcaac ctttcgtttc tcagtaacat
     3961 cttcatgtgt agcgacccac ccgccaccct gcattggctg atggacgaca taaataaaac
     4021 gcccgtcgtt caattgatta gtaatgctat gagggtcgac tttgctcaac tgagcaacgc
     4081 gcctttcaat gtacttcgcc tcctcttcgg gtgtcatccc gcgggtagat cggcttttga
     4141 gaatttgtcg aagcgtggca ccgattttga cttgctcctc cgtcagttta tataaatcac
     4201 gatactgctt gttgcagatg atcaagcgct gatttgcgtc gaacatacaa agcccttggg
     4261 tcatactatt gatcgctatg tcgcgctcgc cagcgatccg cttggataac tccagagctt
     4321 gatgcaaggc gccattgttg gcgttctgca cacgcgcaaa aagcacggaa gccgcaattc
     4381 cgcccaacag caggatcaat gtcagcgtta agctaaccct agcgtccagc caccacgtct
     4441 tccagagttc ttgcatcggc ataatgacaa agaatgtgac tggaaaatgc agcagccgac
     4501 gaaaggcgag gacatttttg gtaccgtcag cggatgcaac tccggtggtg aaaccactgt
     4561 gcggaaactc attctcccgc agatagatca tgaagccacc ggttcttggg cttccataaa
     4621 gttcaacttc gtcacttagc tccggatttg gataacggct caggaggtaa ccgtcgtcac
     4681 gaaatacgcc cagcgatgcc tttgagacga tggatgcgtc tcgccaaaag ttagcaatga
     4741 agtctaccgg cacgcttgcg ccaatgaaat atagtagatt ggcggagccg tccaccacac
     4801 taaatctaac gggaacgacc cattctttcg ctaccgatcc gtacatcggt cggccgatgt
     4861 cggtttccca atgaaatgtg ttgagataat tcttaaacga aggttgctcg gcgacggaca
     4921 ccgacggcgc attgaagggt ctatttgccg caacgataac ttgcccgtct gcacgtatca
     4981 atactacgtt tgtgagttca gggtgcgtag cgtgaaagac tgcaataacg tcgtgcgctc
     5041 gacttttgaa ttcagcggaa tctatatcgt gttggcgaac ttccggcagc gtgtcgacaa
     5101 gccccttcag tgagcgttgc agcacgtcga aataggtgtc gacagcgcgt gccccgatct
     5161 cggcgatgga ctgcagctct ttgcgtgcgt cagcctcttg cttacgccat tccag
//
LOCUS       DATILV010000128         6212 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3097631, whole genome shotgun sequence.
ACCESSION   DATILV010000128 DATILV010000000
VERSION     DATILV010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6212
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3097631"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..802)
                     /locus_tag="VLJ17_02880"
     CDS             complement(<1..802)
                     /locus_tag="VLJ17_02880"
                     /inference="COORDINATES: protein motif:HMM:NF024257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HSV21952.1"
                     /translation="MMASNPSHAQSVTLRSSDGSVTISGPLIRFDGNAYTIKSGANGQ
                     LSFQVSDFSCISESCPGPNAFGIHGSNTIGAELMPRLIEAYAQSRGERAKISSGTSAE
                     VAEIKVLGGDGKSRATIDLQSHGSGTAAPGLASGRAAIGMASRALNAAELLQLTQEGL
                     GDMRSPENEHVVGLDGIVVIVSPRNPVAKLSLQQLQAIFSGAVSDWSQVGGTPGPINV
                     YARDAKSGTFDTFKTLVLDPGKQKLVSSAQRMESSNELSDMVANDPNSI"
     gene            complement(867..1952)
                     /locus_tag="VLJ17_02885"
     CDS             complement(867..1952)
                     /locus_tag="VLJ17_02885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21953.1"
                     /translation="MWHALWPRIVINLSPNQFKPLVAHFFCACKTRNNSPSGREQKLR
                     HLVIVRRQPARIAVMKAIESHFRCHRVSRCGSGATLMRVQVLLKVCPAVMLLATLTPP
                     LLSHAGVPPCAAPTIEIAFQAGGQLQFKIQSPCRKGELVVGRYGEIVIMERFDGGGNL
                     AFQLDCFLGNREIDLTFMDNSRTTNHACSATERAITKVAIVWQDRVDLDLHAFEYAAS
                     PGSDHDRSAGNPGSYQTAQSEYARSSRSHGFMSTVSDGQQLGHNIEVYTLLHHPAEPR
                     GLIAMAVGLGSHNNVARRESCSNGRQERLRVDLDVYVLEHGTKLRSYEREFAAQPCDG
                     GPARFVTNLVPSIVLGNAPVGGNGNAE"
     gene            complement(2000..2686)
                     /locus_tag="VLJ17_02890"
     CDS             complement(2000..2686)
                     /locus_tag="VLJ17_02890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21954.1"
                     /translation="MMFDRFSSSMRRQIGVALYSAVLRPAVLGFLASSSLAIAPALCR
                     DGGANTKPATTPAFPATLAAGSADAGRDRRIYSSIKELMESIIDPSADVLWGAVGTIM
                     DKQGVQELVPKTPEEWLDLRRAAVRIIEGGNLLMMPGREAAPAGTKSEAPGVELEPLE
                     ITALIKRKRKNFDAYARALQALGLEALRASEGKNAVLLVEIGGRMEDVCESCHKTFWY
                     PQEKHVFTRN"
     gene            complement(2960..5404)
                     /locus_tag="VLJ17_02895"
     CDS             complement(2960..5404)
                     /locus_tag="VLJ17_02895"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HSV21955.1"
                     /translation="MPTGSNCVVAEDDLREAERLRALASAAVEALIVCDGHIIAAVNN
                     SFMALAGVDEREALGAKLEKYLPDETLRRALLEHPIKSVETGLRHSNGSTISVETIFR
                     SIDFAGQPHLAIAIRDLRARKQTAQPLERAERFLATVIENAPVPIAVKEPATKKIVLV
                     NRAYEQFTGECRDEVIGKTVHEIFPPPQAKIIAELDEEAIQSGREVRSEFALETPRNG
                     RRTISTTRILIRDDGDTPQYLILVFEDVTERSCAEEKLREQKLLTETAVSNMSQGLVM
                     FDAQHRIVLCNTRYIEIYNMNPEVVRPGCTLQQLNQHRKEIGLFSGDPQKRASDIVAG
                     VGQGQAWTEVVTLPNGRSVQKITQPLTGGGWVATHEDITERKLADERIEYLAHHDALT
                     GLANRTLLREQLGYYLRDVKRGATLAVLCLDLDYFKQVNDTLGHPIGDALLCAVGKRL
                     HECIRDTDFVARLGGDEFAIIQTGVEQPTSASVLAQRLVDAMARPFDADGHEIVVGTS
                     VGISVAPDDSMDPDILMKSADMALYRAKEHGRNGFSFFEAGMDTKMHERRTLEIDLRK
                     AITVGEFELFYQPVMNLAHNTVSGFEALLRWNHPTRGVVSPATFIPLAEETGLIIPIG
                     EWVLRQACAEAAKWPDDIKVAVNLSPAQFRNKNLVSMVTLAVANSGIAANRLELEITE
                     TIMLQNSEATLAVLHMLRSFGVRISMDDFGTGYSSLSYLRSFPFDKIKIDQSFVRDLD
                     KGGEAIAIIHAVSWLGKSFGMTTTVEGVETKSQLEQVRSEGCTEAQGYLFAKPQPASE
                     VPRLLSSLGRKSQAAA"
     gene            complement(5784..>6212)
                     /locus_tag="VLJ17_02900"
     CDS             complement(5784..>6212)
                     /locus_tag="VLJ17_02900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003603580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HSV21956.1"
                     /translation="GFDACIDHRAADMTHQLAAACPAGIDVYFENVGGAVQQAVWPLL
                     NDFARIPVCGLIAQYNAATPMPGPDMFSVLRKRLTLRGFIVSDLGAKQADFLRDLSEW
                     VHSGRLKYREDVVEGLENAPAAFLGLLQGKNFGKLLVHVA"
BASE COUNT         1352 a         1846 c         1687 g         1327 t
ORIGIN      
        1 cgatgctgtt tggatcattg gcgaccatat cagatagttc gttgctcgat tccatgcgtt
       61 gggcgctact gacaagcttc tgttttccgg gatccaagac cagcgtcttg aaggtatcaa
      121 atgttccgga cttcgcgtca cgggcgtaaa cattgattgg gccaggtgtt ccgccaactt
      181 gtgaccaatc ggagacggcg cccgagaaaa ttgcctgcaa ctgctgcaac gacaatttgg
      241 cgacgggatt tctcggagaa acgatgacga caatgccatc gagaccgact acgtgctcgt
      301 tctcagggct gcgcatatcg cccaaaccct cttgggtcag ttgcaaaagc tcggccgcat
      361 tcaaggccct ggacgccatt ccgatagcag cccgtccgct ggcaagaccg ggagctgcgg
      421 taccggagcc gtgagactgc aggtcgatgg tggcgcgact ttttccatca cctcccagca
      481 ccttgatttc agccacttcc gcagatgtcc cactggagat tttggcccgc tcgccgcgcg
      541 actgcgcata ggcctcaata agccgcggca tcaattcggc cccgatcgtg tttgacccat
      601 gaatgccgaa cgcattgggg ccaggacatg attcggaaat gcacgaaaaa tcagagacct
      661 ggaaactcag ttggccgttt gccccacttt tgatcgtgta tgcgttaccg tcaaaacgaa
      721 tgagcggtcc ggaaatggtc acgcttccat cagacgagcg cagtgtcacg gattgagcat
      781 gcgaaggatt actggccatc atcggaacaa tcagcgtcgc agccagtggg gcggcgacca
      841 acagcgcggt tcgcaggaaa ccgaggtcac tcggcatttc cgttgccccc gaccggcgca
      901 tttccgagaa caatgcttgg aaccaggttg gtgacaaagc gagccggacc gccgtcgcac
      961 ggttgcgccg cgaactcgcg ttcatagctg cgcagcttgg ttccgtgctc tagaacatag
     1021 acatcgagat caacgcgaag tcgctcctga cggccattgc tgcaagactc gcggcgcgcc
     1081 acgttattat gcgaacccaa accaacggcc atcgcgatca gcccccgcgg ttcagccgga
     1141 tggtgcagca gggtgtatac ttcgatattg tgccccagct gttgcccatc actcacagtg
     1201 ctcatgaaac cgtggctgcg gctggagcga gcgtattccg attgcgccgt ctggtacgaa
     1261 ccaggattgc ccgccgagcg gtcgtgatca gaaccaggcg atgcggcgta ttcaaatgcg
     1321 tgaagatcca agtccacgcg atcctgccag acgatcgcaa ccttcgttat cgccctctca
     1381 gttgctgagc acgcatgatt ggtggtgcgc gaattgtcca tgaatgtcag atcaatttca
     1441 cgattgccca ggaagcaatc gagctgaaat gccaaattgc cacctccgtc aaaccgctcc
     1501 atgatcacga tctcgccata gcgaccgaca acgagttcgc cctttcggca tggagattga
     1561 attttgaatt gcagttggcc gccggcctgg aacgcgatct caattgtcgg cgccgcacac
     1621 ggcgggactc ccgcgtggga tagaaggggc ggcgtcagag tcgccaacag cataacggcg
     1681 ggacatacct tcaacagaac ttgaactctc atcaatgtgg ccccgcttcc acacctcgac
     1741 acgcgatgac aacgaaaatg actttcgatg gccttcatca cagcgatgcg cgcaggctga
     1801 cgacgaacaa tcacaaggtg tcgcagcttc tgttcacgac cactggggct attatttctc
     1861 gttttgcacg cacaaaaaaa atgcgcgacc agaggtttaa attggtttgg tgacaggttg
     1921 atgacaatgc gaggccagag ggcatgccac aaaaatgggc aaatcacgtc cgcagcgacg
     1981 tccccgctac tgtcatatac taattgcgag taaaaacatg cttctcctgc gggtaccaga
     2041 atgttttatg gcagctctcg cagacatcct ccattcggcc accaatttcc actagtaaaa
     2101 ccgcgttttt cccttcactt gcccgcaacg cttctaggcc gagagcttgc aatgccctgg
     2161 catatgcatc aaaattcttt cgtttcctct ttataagcgc ggttatctcg agcggctcca
     2221 gctcaacccc cggagcctcc gatttggttc cggcaggggc tgcttcgcga ccaggcatca
     2281 tcagtaagtt acccccctcg attattcgaa cagcggcacg acgcaaatcg agccattcct
     2341 ccggcgtttt aggaactaac tcctgaacac cctgcttatc cataatggtc cccaccgctc
     2401 cccaaagtac atctgcggac ggatcgataa tggattccat aagttccttg atggaggagt
     2461 agattcggcg atccctgccg gcatcggcgg agcccgccgc gagagtggca gggaatgccg
     2521 gagtggtggc aggcttggtg ttggcgccac cgtcgcggca tagagccggg gcgatggcga
     2581 gcgaggatga tgctaaaaat cccaagaccg ccgggcgcag cactgccgag tacaaggcca
     2641 ccccgatctg ccttctcatc gagctcgaga agcggtcgaa catcatggtc tcctcccgcc
     2701 cgtgcaccca cgcaacgcca gcgatgcgcc gatcgacttc agtcgaatgc gtgtctcata
     2761 cttccagcta cccaacacca ggcccgacaa ttcgctatgc cgcaacttgt atcattatca
     2821 tcggggagtg gatcactgtc caccacactg atacgtaccg gcatttcgag cggcacacca
     2881 tgaggccgcg ggagatttcc aaaagttccc cgccaatttc cctgtaacca cgtaattcgc
     2941 ggtctcagtg agcgctgcct cacgctgcag cctggctttt ccttccaagg ctcgacagca
     3001 gccgcggcac ttccgaggcc ggctgcggtt tggcgaaaag atatccctgc gcctccgtgc
     3061 acccctccga tcggacctgc tcaagctggc tttttgtttc gacgccctcg accgtcgttg
     3121 tcatgccgaa gctctttccg agccacgata cagcgtgaat gatagcgata gcttcgccgc
     3181 ccttatcgag atcgcgaaca aatgactgat caatcttgat cttatcgaat gggaagctgc
     3241 gcaggtaact caacgatgag tagcccgtac cgaagtcgtc catggagata cggacaccga
     3301 agctgcgcag catgtgcagg acagcaagcg tcgcctcgct gttctgcaac ataattgttt
     3361 cggtgatttc gagttccagg cgatttgccg ctatgccgga atttgctacc gccaacgtga
     3421 ccatggaaac aaggttcttg ttgcggaact gtgcgggcga cagattgacc gcgaccttga
     3481 tgtcatccgg ccacttcgcg gcctcagcac aagcctgtcg cagcacccac tcgccaatcg
     3541 ggatgatgag accggtttcc tccgccaacg gaatgaacgt tgcaggcgaa accacgccgc
     3601 gcgtcgggtg gttccacctc aaaagagcct cgaacccgct aaccgtgttg tgtgcaagat
     3661 tcatcacggg ctgatagaaa agctcgaact ccccgacggt tatggcttta cgaagatcga
     3721 tttcgagggt gcggcgttca tgcattttcg tgtccattcc ggcctcgaaa aagctgaacc
     3781 cgttccggcc gtgctccttg gctcggtaaa gggccatatc ggcgcttttc atcaggatat
     3841 ctggatccat actatcgtcc ggcgcgaccg aaatgccgac gctggtgccg acgacgatct
     3901 catggccatc cgcatcgaac ggccttgcca ttgcatccac aaggcgctgc gccaagacac
     3961 tggccgaggt cggttgctcg acgccggtct gtatgattgc aaattcgtcg ccgcccaggc
     4021 gagccacaaa atcagtatcg cgaatgcatt cgtgcaatcg tttcccaacg gcacacagca
     4081 aggcgtcgcc aatgggatgg cccagtgtgt cgttgacctg cttgaagtag tcgaggtcga
     4141 ggcacaaaac agcgagcgtt gcgccgcgtt tgacgtctct gagatagtag cccaattgtt
     4201 cgcgcagcag tgtacgattt gctaatccag tcagcgcatc gtgatgcgcc aggtattcga
     4261 tgcgctcgtc cgcaagctta cgctccgtaa tgtcctcgtg cgtggcgacc catccgccgc
     4321 ccgtcaatgg ttgggtaatt ttttgaacgg aacgcccatt cggcagcgta acgacctcag
     4381 tccaagcctg tccctgcccg acaccagcaa cgatgtcact ggcacgtttt tgcggatcgc
     4441 ccgagaacag cccaatttct ttgcggtgtt ggttaagttg ctgcaacgtg caccccggcc
     4501 tcacgacctc cggattcata ttgtaaattt caatgtagcg ggtgttgcaa aggactattc
     4561 gatgctgcgc atcgaacatc acgagtccct gcgacatgtt gcttacggcg gtctccgtca
     4621 acagcttctg ttcgcgaagc ttctcttcag cgcagctgcg ttcggtgaca tcctcaaaga
     4681 ccaggatcag gtattgcggc gtgtcaccat cgtcccggat gaggattctg gtcgtcgaaa
     4741 tagtgcgacg accgttgcgg ggcgtctcca atgcaaattc gctcctgact tcgcggccgg
     4801 attggattgc ttcttcatcg agctcagcga taatcttcgc ttgcggcggc ggaaaaatct
     4861 cgtgaaccgt ctttccgatt acctcgtcac ggcattcccc agtgaattgc tcgtatgcgc
     4921 gattgaccaa aacgattttt ttggtcgccg gttctttaac cgcgattggt accggagcat
     4981 tctcaataac ggtggccaaa aatcgttccg cccgctcgag cggctgagcc gtctgtttgc
     5041 gtgcccgcaa gtcccggatt gcgatcgcca aatggggctg gcctgcaaag tcaatcgaac
     5101 ggaaaatggt ttcgacggaa attgtcgatc cgttgctgtg gcgcagtccg gtttcaaccg
     5161 acttgatggg atgctccaga agcgctcggc gcaaagtctc gtcggggagg tatttctcaa
     5221 gcttcgcgcc gagcgcttca cgctcgtcaa cgcctgccag agccataaag ctattgttga
     5281 cagcggcaat tatatgccca tcgcaaacga tgagcgcctc cacggctgcg cttgcgaggg
     5341 cgcgcaacct ctcggcttcg cgcaaatcat cttcggcgac aacgcaatta gaccctgtgg
     5401 gcatgcggag ccttcttgaa cgtcaaagca gccgaaacgt aaggcatacc cctcatgacg
     5461 tacctcatgt ttacctaaca ggaggtaaga accaatgaat ggatatcact aaccggtctt
     5521 taccgagtcc caagcatagc tgaagctacc cgagctggca ccggcgtatg cagggcgccg
     5581 tgcaaaaggt tgatcgcttc cacgcgggct tagggctgcg caccccatca gcacgagatt
     5641 gcgcccatag agcgtgcatc cgcggcgtca atgtcgacgc ggcggtctca agaaatatgc
     5701 ccaacagcgc tgctgaagtc gttcaatgcg gacgattgag tcgaccacgc gcttgcgacg
     5761 tgactacaga tgcgagaatc tgctcacgcg acgtgcacca gcagcttgcc gaagttcttg
     5821 ccctggagca ggccgaggaa cgcggccggc gcgttttcca ggccctcgac cacatcctcg
     5881 cgatatttga gccgaccgct gtgcacccat tcgctaagat cacgcaggaa atcggcctgc
     5941 ttggcgccga ggtccgacac gatgaagccg cgcagcgtga gccgcttgcg tagcaccgag
     6001 aacatgtcgg gcccgggcat tggcgtcgca gcgttgtact gggcgatcaa cccgcacacc
     6061 ggaatgcggg cgaagtcgtt aagcagcggc cacacggctt gctggaccgc accgcccaca
     6121 ttttcgaaat agacgtcgat gccggccgga cacgcagctg caagttggtg cgtcatgtcg
     6181 gcggcgcgat ggtcgatgca ggcatcgaag cc
//
LOCUS       DATILV010000129         7466 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3098116, whole genome shotgun sequence.
ACCESSION   DATILV010000129 DATILV010000000
VERSION     DATILV010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7466)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7466)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7466
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3098116"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..483
                     /locus_tag="VLJ17_02905"
     CDS             <1..483
                     /locus_tag="VLJ17_02905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007751678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSV21957.1"
                     /translation="GEARNAIAACMGALVNVKNIYVVDPDIDITSDEQMDWAMATRFQ
                     PDRDLVVLSGMRTLPLDPSITGGRVGAKAGFDLTWPFGAANRLETRVPEPPCFEGKRF
                     ASIAAALADGPKYFEQLMTAVGSRDGREIVRELEALRTRVNVNRDGDGRYLIKPTSDP
                     "
     gene            632..1678
                     /locus_tag="VLJ17_02910"
     CDS             632..1678
                     /locus_tag="VLJ17_02910"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV21958.1"
                     /translation="MTTLRSIRSVAYGFAVAVCVVTLASAQETIRIGIARSVSNGAEL
                     IAIEKGYFRDVGIKVEIDDVDTSANTIALLATNRLQVLAGGISAGYFNAIEKDLPIAI
                     IADRVSTPIGHNLMLRPDLKDRITSLAGLKGKVIASNGTGSVSTYEVGKMLETAGVSI
                     ADVDVKIIPFTQMSVAFANKAIDAGIVIPPFVSQFLEQGHAVGFAEPDMLVKPKPMTI
                     AVIMVNTDWAKRNAELLGSYYTAYLRGVRDYCNAYHGAPIKEEIIAALIRHGSERRPE
                     LLHKYPWPARSPDGRINTASLLDMQDWYIKNGFSRAKLPAERLVDASYAEFAVQKLGP
                     FVPINKDSKLDGCR"
     gene            1707..2501
                     /locus_tag="VLJ17_02915"
     CDS             1707..2501
                     /locus_tag="VLJ17_02915"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011471323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV21959.1"
                     /translation="MQGRRGAAIAIANLRKEYGDGLRRVVAVDGIDLTIVPGEFVCVV
                     GPSGCGKSTLLRILAGLDRASSGTIDIDAAGWPVANAMVFQDSGLFPWMNVEKNVGFG
                     LMTRGVPSDEADRRIDAALRLVGLTRFRHHYPHQLSGGMRQRGAIARAFVTDPGMLLM
                     DEPFAALDAQNRMILQAELVRIWEETGKTVVYVTHSIDEALLLGDRTVVMTAQPGRVK
                     KIIDIPFRRPRNVMELSATTEFGTLKLAIWRTLEDEVMRARAEIEG"
     gene            2498..3265
                     /locus_tag="VLJ17_02920"
     CDS             2498..3265
                     /locus_tag="VLJ17_02920"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV21960.1"
                     /translation="MSDPSSKLKERLLYLASPIGLLALWEMLVVLGFGDRRFVPAPSD
                     IAVRFWELTINGELARHTAVTLWRVFAGFVIGAVPAIAVGLLMAMFRPARIFFDPLIA
                     ALMPIPKVALMPLLLLALGFGDASKIALVATAVFFPVIVNTYAGAANIDRIYWDVARN
                     FGASSYVMFTRVVFFGALPLIFAGLKIALAVSFVVLVAAEFVASKTGIGYLIWNSWEL
                     LQVDYMFVGIVLIGILGLITTALFQEIERKIIPWKAD"
     gene            complement(3272..3904)
                     /locus_tag="VLJ17_02925"
     CDS             complement(3272..3904)
                     /locus_tag="VLJ17_02925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HSV21961.1"
                     /translation="MLTLYSMQRSGNCYKVRLALAQLSLAYELVEIDILKGDTYTPEF
                     LAKNPSGHVPLLGAAPGRYLPESGAILWYLAEGTPLVPADRLDRAEMLQWMFFEQHSL
                     EPYVGTAHFWLVLIKGGRELQVHAIEEWMEKGYQALRVMEQHLENHRFFAAGRYTIAD
                     IALYAFTHVANECGFDLTGFPAVRSWLKRISEQPGHVRMDWHPTALEIAE"
     gene            complement(4095..5330)
                     /locus_tag="VLJ17_02930"
     CDS             complement(4095..5330)
                     /locus_tag="VLJ17_02930"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011504614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 87 protein"
                     /protein_id="HSV21962.1"
                     /translation="MGATLEILRCGALVTRERMRLVGYALLATFTVAIAILAATSDGP
                     NDVLGRPLGTDFSNVYAAGTYVLEGRPQAPFDPALQLAREKTIFGTATPFYGWHYPPF
                     FLFIAALLALMPYVPALLTWQAASIGLYLLTIRAVLVAPGKASTTAATDPLWLLLALA
                     FPAVFVNLGHGHNGLLTAALFGAALAVLDRRPLLAGVLFGLLAYKPQFGVLIPLVLVA
                     TGRWRTVAAATGTVAALAAVTTFAFGLPVWDAFLESTHFTRTVVLESGQTGWHKIQST
                     FALVRMWGGSVQLAYAVQTVVTLALAAALVWLWRLRVDFNLKAAALIVAAILATPYSL
                     DYDMTTLAPAIAFLVVHGLSCGFAPWEKTALAALWLAPLVARGITGATLLPVGVSIMA
                     VVLGLVLRRAAAISGLSRR"
     gene            5640..6845
                     /locus_tag="VLJ17_02935"
     CDS             5640..6845
                     /locus_tag="VLJ17_02935"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007596745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HSV21963.1"
                     /translation="MGFLADSLQRIKPSATIAVTDKARALKLAGRDVIGLGAGEPDFD
                     TPENIKEAAIRAIRDGRSSKYTNVDGIAELKAAVAAKFKRENGLDYKQSQITVGAGGK
                     QVLYNALMATLNQGDEVLIPAPYWVSYPDMVLLAGGTPVAISTSAETGFKLKPDQLEA
                     AITAKTKWIILNSPSNPTGAAYTRTELKALTDVLVRHSHVWVMTDDMYEHLVYDDFVF
                     TTPAQIEPRLYERTLTVNGVSKAYCMTGWRIGFAGGPEPLIKTMAMIQSQSTSNPAAV
                     SQWASVEALNGPQDFIPKHNKIFKERRDLCVAMLNQANGIKCPKPEGAFYVYPSCAGT
                     VGKRAPSGNKISTDEDFVTELLEAEGVAVVQGTPFGVGQSFRISYATATSSLEQACER
                     IQRFCANLR"
     gene            6879..7349
                     /locus_tag="VLJ17_02940"
     CDS             6879..7349
                     /locus_tag="VLJ17_02940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF992 domain-containing protein"
                     /protein_id="HSV21964.1"
                     /translation="MRRFAKLAVIGIASALFGTATAQERVQAGQLTCDISGGVGLIFG
                     SQRALNCTFTPSVPGPVEFYAGTLTKLGVDIGVTAGGVLVWAVYAPTSRPAGALSGSY
                     GGATAEATVVGGVGANVLIGGSNRTVELQPVSLQGQAGLNVAAGIAGIDLRWVR"
BASE COUNT         1499 a         2133 c         2365 g         1469 t
ORIGIN      
        1 ggcgaggcgc gcaacgcgat cgcggcctgc atgggcgcgc tcgtcaatgt gaagaacatc
       61 tacgtggtcg atcccgacat cgacattacc tcggacgagc agatggattg ggcgatggcg
      121 accaggtttc agcccgaccg cgatcttgtc gtcctgtccg ggatgcgcac gctgccgctc
      181 gatccgtcca tcaccggagg ccgggtcggt gccaaggcgg gcttcgatct cacttggccg
      241 tttggcgccg caaaccgcct cgaaacccgg gtaccggaac cgccatgctt cgaaggcaag
      301 cgcttcgcct cgatcgcggc ggcgctcgcc gatgggccga aatatttcga acagctcatg
      361 accgcggtgg gaagccgcga cggccgtgag atcgtacgcg agctcgaagc gttgcggacc
      421 cgcgtaaacg tcaatcgcga tggtgacggg cgctatctta tcaagccaac cagcgatcca
      481 tgagccagat gatgcgcgct gttgacgcaa aggatgtggc cctgaggtgt gataacaaca
      541 accgtggcgc gagcgaattg ctgaaccgac ttgctgaacc gacttgctga accgacttgg
      601 aattagactt ggagtgcgga ttagacgaac catgacaacg ttgcgttcaa tccggtcggt
      661 cgcatacggc tttgccgttg cggtttgcgt ggtgacgctc gcgtcagcgc aagagaccat
      721 ccgaatcggg atagcgcgct cggtgtcgaa cggcgctgaa ttgattgcga tcgagaaagg
      781 ctatttccgg gatgtcggca tcaaggtcga aattgatgac gtcgacacat ctgcgaacac
      841 catcgcgttg ctcgccacca accgcctgca ggttctcgcc ggcggcatct cggccggcta
      901 tttcaatgcg attgagaagg accttccgat cgccattatt gcggaccggg tgtcgacgcc
      961 gatcggccat aacttgatgt tgcgacccga tctcaaagac aggatcacaa gtctagcggg
     1021 gctcaagggc aaggtgatcg ccagcaacgg cacgggctcg gtgtcaacct atgaggttgg
     1081 taagatgctg gagactgcgg gtgtctcgat tgccgacgtc gacgtgaaga taattccgtt
     1141 cacccagatg tcggtcgcct tcgccaacaa ggctatcgat gccggtatcg tgattccgcc
     1201 cttcgtatcg cagtttcttg agcagggtca tgcggtgggc ttcgccgagc ccgatatgct
     1261 cgtcaagccg aaaccgatga cgatcgcggt tattatggtc aataccgact gggcaaaaag
     1321 gaatgccgag ttgctaggca gctactacac cgcttacctg cgtggcgtac gtgactactg
     1381 caacgcctat cacggcgccc ccatcaagga ggagatcatc gcggcgttga tccggcatgg
     1441 ctctgagcgt cggccggaac tgctgcacaa atatccatgg ccggcgcgca gcccggacgg
     1501 ccgcatcaac accgccagtt tgctcgatat gcaggactgg tacatcaaga atggcttttc
     1561 gcgggcgaag ctcccggcag agcgtctggt cgacgccagc tatgcggagt tcgccgtgca
     1621 gaagctcggg ccgttcgttc ccatcaacaa ggactccaaa cttgatggat gccgctgacc
     1681 caccttccct tggggtgaga aagcacatgc aaggacggcg tggcgcggca atcgcaatcg
     1741 caaatctgcg caaggaatac ggcgatgggc tgcggcgcgt cgttgcagtc gacggtatcg
     1801 atctgaccat cgtgcccggc gagtttgtct gcgtggtagg cccgagcggc tgcggaaaat
     1861 cgacgctgct gcgcattctg gcgggcctcg atcgcgccag cagcggaacg attgacatcg
     1921 acgcggcggg ctggccggtc gccaacgcca tggtgttcca ggacagcgga ctgtttcctt
     1981 ggatgaacgt ggaaaaaaac gtgggcttcg ggctgatgac gcgcggtgtt ccgtccgacg
     2041 aggccgatcg gcgcatcgat gctgcgctgc gtctcgtcgg actcacacga ttccgccatc
     2101 actatccaca tcagttgtcc ggcgggatgc gccagcgcgg cgccattgcg cgcgctttcg
     2161 tgaccgatcc cggcatgctt ttgatggacg agccgttcgc ggctctcgat gcgcagaacc
     2221 gcatgatcct gcaggccgag ctggtgcgca tttgggagga gacaggcaag accgtggtct
     2281 acgtcaccca ttccatcgac gaagctctgc tgctcggcga ccgcaccgtg gtgatgacgg
     2341 cgcagccggg ccgcgtcaag aagatcatcg acattccgtt tcggcgtccg cgcaatgtga
     2401 tggagctgtc ggcgacgacg gagttcggca ccctcaagct tgcgatctgg cgtaccctgg
     2461 aggacgaggt gatgcgggcc agggcggaga tcgagggatg agtgatccgt cgtcgaagct
     2521 caaggaacgg ctgctctacc tcgcctcgcc gatcgggctg ctggcgttgt gggagatgct
     2581 ggtggtgctc ggcttcggtg accgtcgttt tgtgccggcg ccgagcgata tcgcggtgcg
     2641 gttctgggaa ctcaccatta atggcgaact ggcccggcat acagcggtga cgctgtggcg
     2701 ggtgttcgcc ggattcgtca tcggggcggt accagcgatc gcggtcggcc tcttgatggc
     2761 gatgttccgg ccggcgcgga ttttcttcga tccgctaatt gcagcgctga tgccgattcc
     2821 caaggtagcc ctgatgccat tgttgctgtt ggctctcggg ttcggcgatg catccaagat
     2881 cgcgctcgtg gctaccgcgg tgttttttcc ggtgatcgtc aacacctacg cgggcgccgc
     2941 taatatcgac cgcatctact gggatgtggc aaggaacttc ggcgccagca gctatgtgat
     3001 gtttacccgc gtggtgttct tcggtgcgtt gccgttgatc ttcgccggcc tcaagatcgc
     3061 actcgcggtg tccttcgttg tacttgttgc agccgagttc gtggcttcga agaccggaat
     3121 cggttatttg atttggaact catgggaact cctgcaggtc gactacatgt tcgtcggcat
     3181 cgtgttgatc ggaatattgg gtctgatcac cacggccctg tttcaggaaa tcgagcgcaa
     3241 gatcatcccg tggaaggccg attgagctgg ctcactccgc gatctccaaa gcggtcgggt
     3301 gccaatccat gcggacgtga ccaggctgct cggaaatgcg cttgagccac gagcggacgg
     3361 ccggaaagcc ggtaagatcg aaaccgcatt cgttggcgac atgggtgaag gcgtagagcg
     3421 cgatgtccgc aatggtgtag cggccggcag cgaaaaagcg atggttttcg aggtgctgtt
     3481 ccatcacgcg tagcgcctga tatcccttct ccatccactc ctcgatggca tgcacctgaa
     3541 gttcgcgtcc acctttgatg agcacaagcc agaaatgggc ggtgcctaca tatggctcaa
     3601 ggctgtgttg ttcaaagaac atccattgca gcatctcggc gcgatcgagt cggtccgccg
     3661 gcacaagcgg cgtgccttcg gcgagatacc acaagatggc accggattcc ggcagatagc
     3721 ggccgggcgc agctccgagc agcgggacgt gcccactcgg gttcttggcg aggaactctg
     3781 gcgtgtaagt atcgcccttg agaatgtcga tctccaccaa ctcgtaggca agggagagct
     3841 gcgccagcgc gagccgcacc ttatagcagt tgccggagcg ctgcatcgaa tagagcgtca
     3901 acattcccgt gtctcgacct cagttgctgg agacctcagt tgctggagcg ggctcccgct
     3961 acgcatcatc gaagcgcgcc cggcgaacta gcgtggcaaa tgcgacgtca atgcggcttg
     4021 gccttgccgc gatctgtcgc actccccgcg tacccggtcg gcgcatacca tcttaccaag
     4081 cactgcacca aatgctaccg tcgcgacaat ccgcttattg ctgcagcgcg tcgtagcacg
     4141 agaccaagca cgacagccat gatggatact cctaccggaa gcagcgtcgc tccggtgatt
     4201 cctcgggcaa caagtggagc gagccaaagg gccgcgagcg cggtcttttc ccaaggagca
     4261 aatccgcaac tcaatccgtg aacgactagg aacgcgatcg cgggggcgag cgtcgtcatg
     4321 tcgtagtcga ggctgtaggg tgtggcgagg attgcggcta cgatcaatgc ggcagccttg
     4381 aggttgaaat ccacccgcaa ccgccacagc cacaccagcg ccgctgcaag cgcgagcgtg
     4441 acgacggttt ggaccgcata ggcaagctgc accgatccgc cccacatccg cactagggcg
     4501 aatgtgctct ggatcttgtg ccagccggtt tggccggatt cgagcacgac agtgcgggtg
     4561 aaatgcgtag attccaggaa cgcatcccac accggtaggc cgaacgcaaa ggtcgtaaca
     4621 gcggccaatg ccgccaccgt gccggttgcg gccgcaacgg tgcgccatcg tccagtggcg
     4681 accagcacca gtggaataag gacgccgaat tgaggcttat aggcgagcaa accgaacaga
     4741 acaccggcaa gcaatgggcg tcgatccagg acagcaagcg cggcgccgaa gagggccgcg
     4801 gtgagtaggc cgttatgacc gtgtcccagg ttgacgaaca cggccgggaa cgcgagggcg
     4861 agcaggagcc acagggggtc ggttgcggcc gttgtggaag ctttgccggg ggcaacgaga
     4921 accgcccgga tcgtcaaaag gtaaagtcca atcgaggctg cttgccacgt gaggagagcc
     4981 ggcacatatg gcatcagtgc cagcagcgca gcgatgaaca ggaagaaggg tggatagtgc
     5041 cagccgtaga agggcgttgc ggttccgaaa attgtctttt cgcgcgccaa ctgcaaggcg
     5101 ggatcgaagg gggcttgtgg ccggccttcg agcacatagg tgccggccgc atagacgttg
     5161 gagaagtcgg tgccaagcgg ccggccgagc acatcgttgg ggccgtccga ggtcgcggcc
     5221 aggatggcga tcgccaccgt gaaggtcgcc agcaacgcgt atcccacaag ccgcatgcgc
     5281 tcgcgcgtca ccaacgcgcc gcagcgcaga atttccagcg ttgcgcccat gcgagtcctc
     5341 gggtcgctgt ccttcgagcc ggcgtccggc tggcctcctt agaaagaggt ctgtgaaccg
     5401 ttacggtgag gcaaccggtg ctcgttacgg ggcatcacca aacggcgagc gtgagggtat
     5461 ccctagcgga cgcaaattaa gggagagttg aatgggcggc cagattttct gagcttttgt
     5521 tgcaattcga aggtttgtac ttgccgttcc gtcctcagga cattaggaaa acgattcatc
     5581 gcggtagctg gcccgattat cagcaatttt ttgggggtcg cactgtcaag gaggtcatct
     5641 tggggtttct tgccgactcg ctgcagcgca tcaagccgtc agccaccata gcggttaccg
     5701 acaaggcgcg ggcgctcaaa ctggcaggtc gcgacgtcat tggtcttggc gccggggagc
     5761 ccgatttcga taccccggaa aatatcaagg aggccgccat cagggcgatc cgggacggcc
     5821 gatcgtcgaa atacaccaat gtagacggca tcgccgagct caaggcggcg gtggcagcga
     5881 aatttaagcg ggagaacggg cttgactaca agcagagcca aatcacggtc ggggctggtg
     5941 gtaaacaggt gctttacaac gccctaatgg cgacgctcaa tcaaggcgac gaggtcctca
     6001 tcccggcacc ttactgggtc agctatcccg atatggtgct gctcgccggc ggcacgccgg
     6061 tggcgatttc cacatcggct gagaccggtt tcaagctcaa gcccgatcag cttgaggccg
     6121 cgatcacagc caagaccaag tggatcatcc tcaattcgcc ttccaatccg accggagcag
     6181 cttatacgcg cactgaattg aaggcgttga cggatgtgct ggtacggcat tcccacgttt
     6241 gggtgatgac ggacgacatg tacgagcatc tcgtctacga cgattttgtc ttcactacac
     6301 cggcgcagat tgagccgcgt ctttacgagc gcaccctcac ggtcaacgga gtgtcgaagg
     6361 cctactgcat gacgggttgg cgcatcggct ttgcgggtgg accggagccg ctgatcaaga
     6421 ccatggcgat gattcagtcg caatcgacct ccaatccggc ggcggtatcg caatgggcct
     6481 cggtggaggc gctcaacggt cctcaggact ttattccgaa gcacaataag atcttcaaag
     6541 agcgccgtga cttgtgcgtc gccatgctca accaagcaaa cggcatcaaa tgccctaagc
     6601 ccgaaggggc attttacgtc tatccgtctt gcgccgggac cgtgggcaaa agagcgccct
     6661 cgggaaacaa gatcagcacc gacgaggatt ttgtcaccga acttttggaa gccgaaggcg
     6721 tcgccgtggt gcagggcaca cccttcgggg ttggccaatc ttttcgaatc tcgtatgcga
     6781 ccgcgacatc gtcgctagag caggcatgcg agcgcatcca gcggttttgc gccaatttgc
     6841 ggtaacggta ctgtgccgga gggcaaaggg ggacgttcat gcgaaggttc gcaaagcttg
     6901 cggtaattgg aattgcatcg gcgttgttcg gaacggcgac ggcgcaggag cgggttcagg
     6961 ctggtcaact tacctgcgac atttccggtg gggtcggctt gatcttcggc tcgcaacggg
     7021 cgctgaattg cacgttcacg ccgtccgttc cgggaccggt cgaattttat gccggtacgt
     7081 tgaccaagct tggggttgat atcggggtta cagcaggcgg cgtattggtg tgggcggttt
     7141 acgccccgac ctcacggccg gccggtgcgc tttcggggag ctatggcggc gccaccgccg
     7201 aagccactgt ggtaggaggc gtcggagcga atgtgcttat cggcggttcc aatcgcaccg
     7261 tcgaattaca accggtgtcg ctgcaaggcc aagccggttt gaacgtcgct gccggcattg
     7321 ccggcatcga tctgcgctgg gtgcgttaac caccgatttc ctgtccaaaa ggggctcatc
     7381 caaacaagag gggaattgtc atgactctac gtgcggcatg tctttctgcg atcgcgaccg
     7441 caatgctaat ggccagtgcg ccaacc
//
LOCUS       DATILV010000130         5780 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2841170, whole genome shotgun sequence.
ACCESSION   DATILV010000130 DATILV010000000
VERSION     DATILV010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5780)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5780)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5780
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2841170"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..238)
                     /locus_tag="VLJ17_02945"
     CDS             complement(<1..238)
                     /locus_tag="VLJ17_02945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21965.1"
                     /translation="MLVVAKDEHDLRSVSVIRYGAYEVRLVEPPSASDTFAFWIELFD
                     HNCQSSIDGGGANDFERALATAEYLASYAKQLGKR"
     gene            complement(592..1632)
                     /locus_tag="VLJ17_02950"
     CDS             complement(592..1632)
                     /locus_tag="VLJ17_02950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HSV21966.1"
                     /translation="MHELYTRHLGALPTTIGKLTRLACARAQAAGIEPGPLLKKAGLT
                     TQQIEDPGARLSVQRQINFLKLAASALQDEFLGFHLAQPPDLRELGLLYYVPASSEIL
                     GEALRRVTRYSSMANESLSLRYQEDKDLRITFNYVGVARHLDRHQVEFCLTVLIRLCR
                     KLTGCRVEPSRVRFIHRCPGNFSEFAAFIGCDMEFGAAVDEVVFAAPVAQMPVISADP
                     YLNELLIANCEETLSRRPTKQGPFRSIVENTIAPLLPHGNVQASEIARQLGLSQRTLA
                     RRLTSESLMFSDVLNSLRRDLATQYLADHALSISQIAWLLGYQEVSAFTNAFKRWTGK
                     TPREARSRPLLS"
     gene            2085..3335
                     /locus_tag="VLJ17_02955"
     CDS             2085..3335
                     /locus_tag="VLJ17_02955"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vanadium-dependent haloperoxidase"
                     /protein_id="HSV21967.1"
                     /translation="MHANLRKVLLAATIIGTASPAFANVITDWDEKAVSVVMPMGPGG
                     VTQQVYTAQRIMGMVHAAMFDAVNSIERRYRPYLVQLPATPTTSKEAAAAAAAAAVLA
                     TIDEKTASEMKAALATYLGSIPDGVGKSDGVKLGEAVAAKVLEARANDGSNAPDAYRP
                     RTTPGVYVPTAITAASNWSNVKPFAMTRGSQFRPGPPISLESKEWATDYNELKDYGGR
                     NSVKRSAQQTETARFWLMAGPPAYHPFLRQLVAAKQMNVADSARFMALAALGLNEALI
                     AVFDAKYHYEFWRPITAIRNGDIDRNPETEREATWQPIDNTPMHPEYPCAHCILSGSV
                     AGVVKTVLGTADIPEIAITSPTAPGVTHRWTTMTAFTEEVANARIWAGFHYRFSTRVG
                     AGMGLQIGEYVVKNLMQPVETASR"
     gene            3477..4481
                     /locus_tag="VLJ17_02960"
     CDS             3477..4481
                     /locus_tag="VLJ17_02960"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV21968.1"
                     /translation="MDTQNRRRFIAALTATGAAGLIRPPLLKAQDERLETTTVRIVKS
                     IGICTAPDYVADELLRAEGFTDIRYVPEDGGLPSVLAVARGEVDFTTNFSPPLIIAID
                     AGEPITIVAGEHVGCFEVFARQGIRGIPDLKGKTVGVQGLRSSQYTFLSGMASYVGLD
                     PTKDIRWITSSSPKPMELFADGKIDAFLGLPPEPQELRARNIGRVIFNSATERPWSQY
                     FCCMLAGNRDYVRKYPVATKRFLRAVFKAADLCATQPEWAAQRIVDAGFTPRYDYALR
                     TLKEIQYANWREYDAEDTIRFYALRLREAGFIKATPDKILADGTDWRLLNELKRELKG
                     "
     gene            4526..5536
                     /locus_tag="VLJ17_02965"
     CDS             4526..5536
                     /locus_tag="VLJ17_02965"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV21969.1"
                     /translation="MTRIAQSRRRFLGTLAATAAASLIGPPYLRAQDGQLETTNIRIG
                     KIAGICIAPQYVADELLRAEGFTDVRYVATEPGTPSALALAHGEIDFTMNFSPPLIVA
                     IDAGDPITIVGGEHAGCFELFAREGIRSISDLKGKTVGVQALRSSQYLFLSGMASYVG
                     LDPAKDIRWVTSLSPKPMELFAEGKIDAFLGLPPEPQELHARNTGHVIFNSATERPWS
                     QYFCCMLAGNRDYVRKYPVATKRVLRAVIKATDLCVSEPERVARRLVDGGFTPRYDYA
                     LQTLKEIQYAKWREYDAEDTVRFYSLRLRESGLIRATPNKILADGTDWRFFNELKREL
                     KA"
     gene            5539..>5780
                     /locus_tag="VLJ17_02970"
     CDS             5539..>5780
                     /locus_tag="VLJ17_02970"
                     /inference="COORDINATES: protein motif:HMM:NF014667.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HSV21970.1"
                     /translation="MRAPAVLALVMLVSALIPSAVLVGPSRDVAQEASQTPPLPKIAP
                     APGFTLTSQDGAQISLADLRGKVVAVTFIFTRCTAT"
BASE COUNT         1224 a         1753 c         1678 g         1125 t
ORIGIN      
        1 gccttttgcc caactgcttt gcatatgaag cgaggtattc ggctgttgcc aaggcccgct
       61 caaaatcgtt cgcgcccccg ccgtctatcg aagactgaca gttgtgatcg aacaactcga
      121 tccaaaaggc gaaggtatcg gacgccgaag gcggctcgac gagccgaact tcatatgcgc
      181 cgtatcgtat cacggatacg gacctcaaat catgctcgtc ttttgcaaca acgagcatcg
      241 tgatgtacgc ttgagccaga cgcgcttcga gggtcatctt ttgcaacgac gtccaaaaag
      301 tgactttgtc ctggaggaca aagtcttgcg tgctctgttt ccttgatcga aaccgtgccg
      361 atccaaacgt ccaacgcgac gcccgtttgg ttgcggtatc gttttaacgc aaacgatccc
      421 ctgccggcag cgaacagtgc tctaacacag actgctcgat tgcgtcttgc tactttgagc
      481 caaaggtttg attagccatg ccaagtttcg aattgcaggc aatcgcatgc agcatcccga
      541 tttccggtaa tcgtcgctga ccgtcagaac cgaaagagat cgcgtttatc actacgagag
      601 cagcggtcgg gaacgtgctt cccgaggggt tttgcccgtc caacgtttaa atgcattggt
      661 gaatgcgctg acttcctgat acccgagaag ccacgcaatt tgtgatatcg acaaggcgtg
      721 gtcggctaga tattgcgtgg ccaggtcgcg cctcaggcta ttcaaaacgt ccgagaacat
      781 caaactttct gatgtgagac ggcgcgcaag ggttcgctga ctcaaaccga gctggcgggc
      841 aatttcgctc gcttgcacgt taccgtgcgg caacagcgga gcaatcgtat tctcgacgat
      901 cgatcggaac ggcccctgct tcgtcggccg gcgggacagc gtctcctcgc agttcgcgat
      961 caaaagctcg ttgaggtacg ggtcggcgct gataaccggc atttgggcga ctggcgctgc
     1021 gaacacgact tcatcgactg cggcaccaaa ttccatgtca cagccaatga acgcagcgaa
     1081 ttcggaaaaa ttgccggggc aacgatggat gaatctcacg cggctcggtt ccacgcgaca
     1141 gcctgtcaat ttccggcata gacggatcaa cacggtcagg cagaactcaa cctgatgccg
     1201 atccaaatgc cgcgcaaccc caacgtaatt aaacgttatc ctgagatctt tgtcttcttg
     1261 atacctcagg gacaggcttt cattggccat tgagctgtat cgcgttaccc gtcgcaaggc
     1321 ctcgcccaaa atttccgagg aagccgggac gtagtaaagt agccccaatt cccgaagatc
     1381 aggcggctga gcgaggtgaa agccaagaaa ctcgtcctgc agcgcgctcg cggcgagttt
     1441 caaaaagttg atctgacgct ggacactaag tcgggcacca gggtcctcga tttgttgtgt
     1501 ggtcaacccc gctttcttca acagcggccc cggctcgatc cctgccgcct gcgcgcgcgc
     1561 gcaggcaagc cgcgtgagct tcccgatcgt ggtcgggagc gcgccgagat gtctggtgta
     1621 gagttcgtgc acagtcttgt cctttatcgg tcaaaactga cacaagctgg cacgtgccga
     1681 caaggtcttg agggaaattg caaaaacttc ccgccaaccg ggaggacgtt caatccagcg
     1741 tccgccggaa ccatatcacg gcgatcgtgc tggcaatccc catcagaccg cttgtcgacg
     1801 tgtaggtccg ccaaggacga gcccttgagc gtgatgctgc catcacacga aggggcgaca
     1861 cttaatcgta ccggcacttc agtcgtagca ccgttggatc gctccgccgg ccgcagcaag
     1921 attaagaaaa gtgtagaacg gacaacgagt tagaccggtc gtccgggatc gcggccaggt
     1981 ccaaaggcga tccgtcaggc tcatttacgc caaatgcgcg caccgacaag gttgtgacag
     2041 cgatccgcag acgcggattg ccgacacaac cagaggagag caacatgcac gccaatcttc
     2101 gcaaggtgct gcttgccgcc accatcatcg gcactgcgtc accggcattc gccaatgtca
     2161 tcaccgattg ggacgagaaa gccgtctcgg tcgtcatgcc aatggggccc ggcggagtga
     2221 cccagcaggt ctacacagct cagcggatca tggggatggt ccacgccgcg atgttcgacg
     2281 cggtcaattc gatcgagcgg cgttatcgac cgtatctggt tcagctgccc gcgaccccca
     2341 caacatccaa ggaagccgct gctgccgcag ccgctgcagc ggtcctggcg acaattgatg
     2401 aaaagacggc gagcgaaatg aaagccgctc ttgcgaccta cctcgggtcg atccccgatg
     2461 gcgtggggaa atcggacggc gtcaagcttg gcgaagcggt tgcggcgaag gtgttggaag
     2521 cgcgggcgaa cgacggctcc aatgcgcccg atgcctaccg gccgaggacc acgcctggcg
     2581 tctacgtgcc gaccgcgatc acggcggcct cgaactggtc gaacgtaaag ccattcgcga
     2641 tgaccagggg atcccaattt cggccaggcc cgccgatttc gctggagagc aaggaatggg
     2701 caacagacta caatgagctc aaagactatg gcggacggaa cagcgtgaag cgatcggcgc
     2761 agcagaccga aaccgcccgg ttctggctca tggccggtcc gccagcctat catccgttcc
     2821 tacgccagct cgtggcagca aagcagatga atgtcgccga tagcgcgcgg ttcatggcgc
     2881 tcgcggcgct tgggctcaac gaagcgctga tcgctgtgtt cgacgccaag tatcattacg
     2941 agttctggcg cccgatcacc gcaatccgca acggcgacat tgatcgcaat ccggagactg
     3001 agcgtgaggc gacctggcag ccgatcgaca acaccccgat gcaccccgaa tatccgtgcg
     3061 cccattgcat cctgagcggc agcgtcgcgg gtgtcgtaaa gacggtactc ggaactgcgg
     3121 acattccgga gattgcgata accagcccga cggcacctgg cgtcacccac cgttggacca
     3181 ccatgacggc ctttaccgaa gaggttgcaa acgctcgcat ctgggccggc ttccactatc
     3241 gcttctcgac ccgcgtcggg gccggtatgg ggcttcagat cggtgagtac gtcgtgaaaa
     3301 acctgatgca gccggtcgag accgcctcgc gatgacgccg tacgccgggc ccgcacaaca
     3361 catgcgggcc tcacgaaatc accctcatga gccgacaagc ggctcatggt cgacggtcgt
     3421 cgccgcatgc taggctgaag gatgtgcgtg cgcgaacggc accgggagag atcgccatgg
     3481 atacccagaa tcgacgccgc ttcatcgcgg cgctcaccgc gaccggcgcc gccgggctca
     3541 tccgcccgcc gcttttgaag gctcaagatg aacggctgga aacaaccact gtccggatcg
     3601 tgaaatccat tggcatctgc accgcgcccg attatgtcgc tgacgaactg ttgcgtgcgg
     3661 agggcttcac cgatatccgc tatgtgccgg aagatggcgg attgccgtcc gtccttgcgg
     3721 tcgcccgtgg agaggtcgac ttcacaacga acttctcgcc acccctcatc atcgcgatcg
     3781 atgccggcga accgatcacg atcgtcgctg gcgagcacgt cggctgcttc gaagtgtttg
     3841 ccagacaagg tatccgcggc atcccggacc tgaagggcaa gaccgtgggc gtacaaggct
     3901 tgcggtcaag ccaatatacg tttttgagtg gcatggcttc gtatgtcggg cttgatccca
     3961 cgaaggatat ccgctggata accagttcct cgcccaagcc gatggaattg ttcgcggacg
     4021 gcaagatcga tgcgtttctc gggcttccgc ccgagccgca ggaattgcgc gcccgcaaca
     4081 tcgggcgcgt gatcttcaac agcgccacag agcgtccatg gtcgcaatac ttctgctgca
     4141 tgctggcggg aaaccgcgac tatgtccgca aatatcccgt cgcaactaag cgctttctgc
     4201 gtgcggtttt caaagcggcg gatctgtgcg ctacccagcc ggagtgggcg gcacagcgga
     4261 tcgtcgacgc cggatttacc ccccgctatg actatgcgct tcggacgctc aaggaaatcc
     4321 aatacgcaaa ttggcgggag tatgacgccg aggacaccat ccggttctac gcgctgcggc
     4381 tgcgcgaggc cggttttatc aaggcgaccc ccgacaagat tcttgccgac ggcacggatt
     4441 ggcgtttgct caacgagctc aaacgcgagc tgaagggttg accgtgcgca ccacgtttgt
     4501 acctcacgtt cagagaggaa atcacatgac acgcatcgca caaagtcgcc gccgtttttt
     4561 gggcacgctt gctgcgaccg ccgccgcaag cctcattggc ccgccatatt tgagggctca
     4621 agacggacag ctggaaacga ccaacatccg cattgggaaa atcgccggca tctgcatcgc
     4681 gcctcagtat gtggccgacg aactgctgcg cgccgagggc tttaccgacg tccggtatgt
     4741 ggcaactgag cccggtacac cgtccgctct tgcactcgcc cacggtgaga tcgacttcac
     4801 gatgaacttc tcgccacccc tgatcgttgc gatcgatgcc ggcgacccga ttacgatcgt
     4861 cggcggcgaa cacgcgggct gcttcgaact atttgcgcga gagggcatcc gcagcatctc
     4921 agacctcaag ggcaagacgg tgggcgtgca agccttgcgt tcaagccagt acttgttttt
     4981 gagcggcatg gcttcgtatg tcgggctcga tcccgcaaag gatattcgct gggtcacgag
     5041 tttatcgccc aagccgatgg agctattcgc ggaaggaaag atcgacgcgt ttctcggcct
     5101 tccgcccgaa ccccaggaat tgcacgcccg caacaccggc catgtgatct tcaacagcgc
     5161 cacggagcgt ccgtggtcac aatacttctg ctgtatgctg gcgggaaacc gcgattatgt
     5221 ccgcaaatat ccggtcgcca ccaaacgcgt cctgcgtgcg gtcatcaagg cgactgatct
     5281 ttgtgtcagc gagccggagc gggtcgcccg acggctggtc gatggggggt ttacgccgcg
     5341 ctacgactat gcgctccaaa cgctcaagga aattcaatac gcgaagtggc gggagtacga
     5401 cgccgaggac accgtccggt tctattcgct gcggctgcgc gagtcggggc ttatccgggc
     5461 gaccccgaac aagattcttg ccgatggcac tgactggcgt ttcttcaatg agcttaagcg
     5521 cgagttgaag gcttgaccat gcgcgcgcca gctgtcctcg cgctcgtcat gctggtatcg
     5581 gccctgattc cgtcggcggt gttggtggga ccgtcacgcg acgttgccca agaggcctcc
     5641 cagacacctc cactgccaaa gatcgcaccg gcgccaggct tcacgctgac ctcgcaagat
     5701 ggtgcacaga tttcgctggc cgacctccgc ggcaaggtgg ttgccgtgac cttcattttc
     5761 acgcgctgta ccgccacctg
//
LOCUS       DATILV010000131         3563 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4631633, whole genome shotgun sequence.
ACCESSION   DATILV010000131 DATILV010000000
VERSION     DATILV010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3563
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4631633"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..837
                     /locus_tag="VLJ17_02975"
     CDS             <1..837
                     /locus_tag="VLJ17_02975"
                     /inference="COORDINATES: protein motif:HMM:NF023701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GSU2403 family nucleotidyltransferase fold
                     protein"
                     /protein_id="HSV21971.1"
                     /translation="EIEPSFRAVPNLHSPTTAATYVNAQNYRVELLTDNRGPESDRLT
                     PLPALQTHAQPLRFLDYLLADAIRAAVLWDGGILVNVPQPERYAVHKLIVAERRTASA
                     IAKRQKDLHQASSLFDALAEHRAHDLAAAWKEAYERGPQWRKHLLAALSHLDQLGRDR
                     LLYAIGQRRSIVTGLDVEFRDVPPRYDFLRDVVLVPGGGHRQPDYAISREALDDWFGS
                     EGVGQEPRIKAFRNHRAEIEALAREAYVNEPVPADGAIVITTADVPRLRTRIKSTARR
                     RK"
     gene            complement(1591..2256)
                     /locus_tag="VLJ17_02980"
     CDS             complement(1591..2256)
                     /locus_tag="VLJ17_02980"
                     /inference="COORDINATES: protein motif:HMM:NF025063.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
                     /protein_id="HSV21972.1"
                     /translation="MWGAPRIHGELLKLGFKIAESTVSKYMVQHRGPPSQTWRTFLRN
                     HADAIAAIDLCVVPTLTFECLFAFLVVGHGRRQLLWFAVTRHPTAEWLAQQIVEAFPW
                     NTAPTYLVRDNDGIYGQTFTRRVRTMGIRDRPISPRSPWQTPYIERLIGTLRRECLDH
                     VLIFSERHLRRTLTSYSLYYNGTRTHLGLGKDAPLRRAVQRCGTIVTMPILSGLHHRY
                     ARI"
     gene            2841..2987
                     /locus_tag="VLJ17_02985"
     CDS             2841..2987
                     /locus_tag="VLJ17_02985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21973.1"
                     /translation="MEQVVAINRNDWSSSIGTGGRHQSVRAIERNIGQNNSNRGKDLR
                     RRTQ"
BASE COUNT          770 a         1045 c         1027 g          721 t
ORIGIN      
        1 gaaatcgaac cttcatttcg ggctgtcccc aatctccata gccctaccac ggcggcgacc
       61 tatgtaaacg cccagaacta tcgcgtcgaa ctgctcacgg ataatcgagg cccagagagc
      121 gaccgtctga caccccttcc cgcgctacaa acgcacgcac agccgttgcg atttcttgac
      181 tatcttctcg ccgacgcaat tcgggcagcc gttctctggg acggcggcat ccttgttaat
      241 gttccacaac ctgaacgata cgcagtacac aagctgatag tcgccgaacg gcggaccgca
      301 tcagccatcg ccaaacggca aaaggacctg caccaagcgt cttcgctttt cgacgctctg
      361 gctgagcatc gagcgcacga tcttgccgca gcgtggaaag aagcatacga gcgcggccca
      421 caatggcgaa aacaccttct tgctgcccta tcgcatttag atcagcttgg tcgtgaccga
      481 ctactctatg caattggcca aagacgatcg atcgttaccg gactcgacgt tgaatttcgt
      541 gatgtgcctc cccgttatga ttttttgcgc gacgtagtgc tggttccggg cggggggcat
      601 agacagcctg attatgcgat tagccgagaa gcactcgacg attggttcgg ttctgaagga
      661 gtggggcaag agccacgcat aaaggcattt cgcaaccatc gagcagaaat tgaggcgcta
      721 gcacgcgaag cctacgtcaa tgaacctgtg cccgccgatg gcgctatagt gatcacaacg
      781 gccgatgttc ctcgcttgcg gacaagaatt aaatccacgg cgcgtcgacg caaatagagt
      841 tccggtgttg tagtattgat tgttgttttg attgttattg tcattggcaa cgctcggcaa
      901 atccgtccac ccttgcgccg gctggtcgtc ggtggtcgag gtcgccggct gggtggtgcc
      961 ggatgactcc gtggccggat cgggcaacgc gctggtccac ggcgtgtcgg gctgctgttg
     1021 ctgctaagcc gctgagtcat ctaccgacaa ctgctcctgc ggcaccgtgg tcgtagccga
     1081 ttcctgcccg ctcgtttcgg gagcggtcca ggatgactcg gaccatgcca tggctgctcc
     1141 tcgcgggaac gccacccgga tacgccgtgt cagaccagcc agctaacaag gagcgaactg
     1201 cgccggcgtt gccagagagc ttcgatgtcg agacacgctc tcattccgct taaagggcag
     1261 ttgccaaaat cgcctttggg ctagcgaacc acagctccag taatgagatc gcgcaccgcg
     1321 ttaaccctgg tgccaccgcc tgagcaaatc tgccgcggtg ctttgggcta ccagtggcag
     1381 gtgcgccaaa gtcagcggcc aggtcggcgc ggcgtgctgg cttttttagg gcaagcggcc
     1441 gcgagttgaa gtcgtgccag tcgaacgaga caaacggctg atatggagcg ggcaaaccct
     1501 tatagtccat cttcatcgac cgtggcgtcc atgcacgcca gagagcgact cagctttcta
     1561 tcgacgccaa tctcctgtcc ttcccgaaaa tcatatccgg gcgtatctgt gatgcaatcc
     1621 ggataagatt ggcatggtga cgatggtccc acatcgttgg acggctcgtc gtagcggtgc
     1681 gtccttgccc aaccccaggt gcgtgcgcgt cccgttgtaa tagagcgaat acgaggtcag
     1741 ggtccggcgc aaatgccgtt cgctgaagat caggacatga tccaagcatt cgcgccgcag
     1801 cgtcccgatc aggcgctcaa tatagggcgt ttgccagggc gacctcggtg atatcgggcg
     1861 gtcccgaatc cccattgtcc ggactcgacg tgtaaaggtc tgcccataga tgccatcatt
     1921 gtcgcgcacc aaataggtcg gtgccgtgtt ccaagggaat gcctccacga tctgttgcgc
     1981 cagccactcc gccgtcgggt gccgggtcac tgcaaaccaa aggagctgtc gtcgaccgtg
     2041 acccacgacg agaaacgcaa acaagcactc gaatgtcagg gtcggaacga cgcagagatc
     2101 gatcgccgcg atggcgtccg catggttgcg caggaatgtc cgccaggtct gtgatggcgg
     2161 cccgcggtgc tggaccatgt atttcgatac ggtcgactcg gcgattttaa acccgagctt
     2221 gagtagttcg ccatggatgc gcggggcgcc ccacaatggg ttctccttgc tcatctggtg
     2281 gataagatca cgcagctcac ggctaactct gggcctccct gaccgaccgc gagatttcca
     2341 gcgccagtag gcccgaaacc ctgctcgatg ccaccgcagg atcgtgtcag gctgaacgat
     2401 gcgggacaaa ccgagcaggc ttggccagag ccaagtcatc cataccaaca acgccctgtc
     2461 actcccgcga agctgccgac ggtgcggtgc acgcctcagg gcgatattga gctgatgccg
     2521 gagaaatagg ttctcgactt ccagccgacg cctcgacctg cacaggttgg cgacaaacgt
     2581 cctaagcagc tggaagattg caagcattgc gccggatgat gcgctgattc tgcctcatca
     2641 cgcgaatccg cgcggatgaa attttcggga acgacagcgg tctattccag atgccaatca
     2701 cagcgtgatt tacgaattcg ccatggacac gtctaccacg tatcgacggg aagcgagata
     2761 cagatgtccc cctccgtgga caaccgcgcg ttctcgtgcg agcggccgca caaatcactc
     2821 ggatgcggta gagtcatcaa ttggaacagg tggtcgccat caatcgaaac gactggtcgt
     2881 cttcaatcgg aacaggtggt cgccatcaat cggtgcgcgc aatagagcgc aacatcggtc
     2941 aaaacaacag caatcgcggg aaagacctgc gtcggcgcac gcagtaaatt aatcctcaca
     3001 actgctgcag caaccaccgc attgcagcgt taatggaggt aagagatgaa aggctcttca
     3061 gtgcttattc tcgcggccgt cgcatcgttg gctgctttct ccgtctcggc tcagactcag
     3121 acaagtggca gccgagaggc aacgattcac aagtgcatac ttaaagcggt cgccgaatat
     3181 cctcgcggcc cagacagcaa cgactcggca cgaacggctg tatacaaggc gtgcatggcg
     3241 gatgccggaa tggctcctta atcattggct gccagcagct gaacgtcgcc cggtcgaggc
     3301 cgcctgcgcg cgcgtcctcg tcgacccggg gccccggggg gctggcatct acagcgccac
     3361 cgagctaaag gtcaaggata tgccgcgggg cgtgttccgc gatggttcgt tgtgcgttca
     3421 taggcgtaag caaatctgat caagtagggg cttgggacgt tcgtcgctaa cctgtccatg
     3481 gcgaattcgt aaatcctcgc aaaaaacgga gcggtgcgga cagtcttgtg agatgtcgac
     3541 atcgtgctac cgtccatgtc gat
//
LOCUS       DATILV010000132         2772 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4375112, whole genome shotgun sequence.
ACCESSION   DATILV010000132 DATILV010000000
VERSION     DATILV010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2772)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2772)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2772
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4375112"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..580)
                     /locus_tag="VLJ17_02990"
     CDS             complement(<1..580)
                     /locus_tag="VLJ17_02990"
                     /inference="COORDINATES: protein motif:HMM:NF017021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HSV21974.1"
                     /translation="MQTTLLSIGIAIILALAAAPVAPVFIDWSQYRAEIEAEAGRMVG
                     LPVRIGGAIDVRLLPMPSLRLSDVQIGPPASAQTMSISGLAMEFGLGTLMRGEFRANQ
                     VVLDRPEMRVGLDRSGAVQMPSLSFRFDADRFAVERLAINDGRLVLTDAVSGARLAID
                     RLSLSGEVGSLVGPFKVEGSFTAEGEQYAYRLF"
     gene            complement(639..2051)
                     /locus_tag="VLJ17_02995"
     CDS             complement(639..2051)
                     /locus_tag="VLJ17_02995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HSV21975.1"
                     /translation="MTTAVLTAAASADLRTAALAALAQRFGERLSVALAAREQHANTT
                     TWVANQPPDAVAYPASAEEVQAIVRICAAHGLPVIPFGTGTSLEGQVNAPFGGISIDF
                     RDMNRVLAVHPEDLDCVVEPGVTRKQLNAFLRDDGVFFPIDPGADASIGGMAATRASG
                     TNAVRYGTMKDNVLALKAVLANGDMIATSRRARKSAAGYDLTRLLVGSEGTLGVITEI
                     TLKLHGIPEAIAGGICPFPSVEAACEATIATIQSGIPVARIELLDALQVKAVNIYSNL
                     TLPERPMLCLEFHGSPTGVAEQSARFGDIAADLGGGPFEWATKAEDRTRLWQARHDAY
                     WAALGLRPGAKAIASDVCVPISRLAECVTATQADVAASQLIAPIVGHVGDGNFHLSIL
                     VDMADADELRRTEGLLERLVERALAMEGTCTGEHGVGQGKMKYLRAEYGDAALLAMRA
                     IKTALDPQNIMNPGKIITLG"
     gene            2240..2749
                     /locus_tag="VLJ17_03000"
     CDS             2240..2749
                     /locus_tag="VLJ17_03000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HSV21976.1"
                     /translation="MLDRAEIAPLFFAPFVSSVMRVEPQWTDYNGHLNMAYYNVLFDR
                     AVDETYELIGVGADYAASRRLSIFTAEVHICYLRELHAGDPVRVTFQLLDYDAKRIHY
                     FEQLFHAEEGFVSATSENLSLHVDMTSKKTAAFPCEVVAQLAEMKASHALLPIPGAAG
                     RSVGMDWRR"
BASE COUNT          539 a          874 c          826 g          533 t
ORIGIN      
        1 cgaacaaccg ataggcatac tgctcacctt ccgccgtgaa actaccttca accttgaacg
       61 gaccaacgag cgaacccact tcaccgctca agctcaatct gtcgatggca agcctggcgc
      121 cgctcacggc gtccgtgagg acgagccggc cgtcgttgat agcaagtcgt tcgacggcga
      181 agcgatccgc atcgaatcgg aagctcaggc tcggcatttg cacagcgccc gaacggtcaa
      241 gccccacacg catttcagga cgatcgagta cgacttggtt ggcgcgaaat tcgccccgca
      301 tcaaagtgcc gaggccgaac tccatcgcca gcccgcttat gctcatcgtc tgggccgatg
      361 ctggagggcc gatctgcaca tcgctgagcc tgagggatgg catcggcagc aggcgtacat
      421 cgattgcccc gccaatccgc accggaaggc caaccatccg gccggcctca gcctcgatct
      481 ccgcgcgata ttgactccaa tcgatgaaaa ccggtgccac cggcgctgcc gccagtgcca
      541 ggattatggc tatgccaata ctcagaaggg tcgtctgcac caatgtgctc ccacagtgat
      601 tgttataagt cgtccatgtc gacttaccta agcatgtttt accccagtgt gatgatcttg
      661 ccgggattca tgatgttctg ggggtcgagc gctgtcttga tggcccgcat cgcgagcagc
      721 gccgcatccc catactcggc cctgaggtat ttcatcttgc cttggccgac gccgtgctcg
      781 cccgtacagg tgccctccat ggccaaagcc cgctccacca gccgttccaa caagccttcg
      841 gtgcggcgca gttcgtcggc atccgccata tcgacgagaa tcgacaggtg gaaattgccg
      901 tcgcccacat gccccacaat cggggcgata agctggctcg ccgcaacatc cgcctgggtc
      961 gctgtgacgc attcggcaag ccgggatatc ggcacgcaga catcgctagc tatcgccttg
     1021 gcgccgggcc gcaagccgag cgccgcccaa taggcgtcat gccgggcctg ccatagccgg
     1081 gtgcgatcct ccgccttggt ggcccactcg aacgggccgc cgccgagatc ggccgcgata
     1141 tcgccgaaac gcgcggattg ctcggcaacg cccgtgggac taccgtgaaa ttcaaggcac
     1201 agcatcggac gttccggcaa cgtcaaattc gaatagatat tgacggcctt gacctgaagg
     1261 gcgtcgagca actcgatgcg agcgaccggg ataccggatt ggatggtcgc aatggttgcc
     1321 tcgcacgctg cttcaaccga cggaaacggg cagatgccgc ccgctatggc ttccgggatg
     1381 ccatggagct taagggtgat ttccgtgatg actccaaggg tgccttcgga gccgacaagc
     1441 agccgggtga gatcgtagcc cgccgccgac ttacgggcgc ggcgcgatgt cgcgatcatg
     1501 tctccattgg cgagcactgc tttaagtgcc agcacattgt ccttcatggt gccatagcgg
     1561 accgcattgg tgccggaggc gcgggtcgcc gccatgcctc cgatcgaggc gtcggcaccc
     1621 ggatcgatgg ggaagaacac cccgtcatcg cgcagaaagg cgttgagctg cttgcgcgtc
     1681 accccaggct cgaccacgca atcaaggtcc tcgggatgaa ccgccaacac gcgattcatg
     1741 tcgcggaaat cgatggatat gcctccgaac ggtgcattga cctggccttc gagcgacgtc
     1801 ccggtgccga acgggatgac cggcagccca tgggcggcac agatacgcac gatcgcctgc
     1861 acctcctccg ccgaggccgg atacgccacc gcgtcggggg gttggttcgc tacccacgtg
     1921 gttgtatttg catgctgctc gcgtgcggca agtgcaaccg acaggcgttc gccaaaccgc
     1981 tgcgccagtg ccgcgagtgc ggcagtgcgc aaatcagcac tggccgccgc ggtcaggacc
     2041 gcggttgtca tacgattttc tcccagctgt tctttttgcc gttcgtattt tcgatacgga
     2101 cacgcgatcg aatcggtgcg attcatcata acgccacgat gacattcatc ataacgccat
     2161 taacggctgc agcgcgcttc gatttggcga gacaggccta aatttcctgt cataatgaat
     2221 gccggggagt agcgacggga tgcttgatcg ggctgagatt gcgccattgt tctttgcgcc
     2281 gttcgtgtcg tcggtcatgc gggtcgaacc gcagtggact gactacaacg gccacctcaa
     2341 tatggcatat tacaacgtgc tgttcgaccg cgccgtcgac gaaacttacg agttgatcgg
     2401 agtcggggcg gactatgcgg cgagccgccg tctgtcgatt tttaccgccg aggtccacat
     2461 ctgttacctg cgcgagctgc acgccggcga cccggtgcgg gtcacgttcc agctgctcga
     2521 ctacgacgcc aagcggatcc attacttcga gcagttgttt catgccgaag agggctttgt
     2581 gtcggcaacc tcggagaacc tgtcgctgca tgtcgacatg acgtcgaaaa agaccgcggc
     2641 cttcccgtgc gaggtcgtgg cccagcttgc cgagatgaaa gcctcccatg cactcctgcc
     2701 gattccagga gcggcggggc ggagcgtcgg gatggactgg agacgttgag acgccgcgcc
     2761 ccgatgcggc gc
//
LOCUS       DATILV010000133         7246 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_542067, whole genome shotgun sequence.
ACCESSION   DATILV010000133 DATILV010000000
VERSION     DATILV010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7246
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_542067"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1180)
                     /locus_tag="VLJ17_03005"
     CDS             complement(<1..1180)
                     /locus_tag="VLJ17_03005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tex-like N-terminal domain-containing protein"
                     /protein_id="HSV21977.1"
                     /translation="MRISINRQIARELDVREEQIAAAVALLDEGATVPFIARYRKEVT
                     GALDDTQLRSLDERLRYLRELEERRTVILDSIREQGKLDDALQAAIYAADSKSRLEDI
                     YLPFKPRRRTKAEMAREAGLEPLADVLLTRPENDPLVAAASFIDGEKVADVAAALDGA
                     RAILVERFAEDADLIGALREEMWSVGRLVSKVRDGKQEAGAKFSDYFDFAEDLAKAPS
                     HRVLALFRAEKEEILDVSMEPESPTANAGPNRYELRIMHRCGISDRGRPGDKWLMDTA
                     RKAWRSKIQVHLGIDLRLRLWNAAEQEAVRVFAANLRDLLLAAPAGARPTLGLDPGFR
                     TGVKVAVVDGTGKVVATSVIYPHEPQRQWNEALAILGKLVKQHKVELISIGNGTASRE
                     T"
     gene            complement(1390..2376)
                     /locus_tag="VLJ17_03010"
     CDS             complement(1390..2376)
                     /locus_tag="VLJ17_03010"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV21978.1"
                     /translation="MNYWLMIERMFKSCLCLLVGTAMLASAAAQGLSNRPITIVVPYS
                     PGTGPDVMARIVGEELQKRWNQAVVIDNKPGATGNIGTQIVARAAPDGHTLLMASNPF
                     TMNVSLFSPLPYDPIKSFVPIIDVGAGALALCVHPAVPATTVSEFIDYVRQHHGELNY
                     GSPGVGGPHHLAMELLKQITKIDIRHVPYRGSAGATQDIVGGHVAGGFLSLSIAAPLA
                     RNGSLRILGVASKERVRTAAELPTLAEQGLAGFEAELWFGLLAPAGTPREIIERYNKV
                     VNEIVREPHVVELAANQGVVTRGGTSEQLAEFLVRDIATWQQVVKEIGIKVE"
     gene            2498..4033
                     /locus_tag="VLJ17_03015"
     CDS             2498..4033
                     /locus_tag="VLJ17_03015"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSV21979.1"
                     /translation="MEELTALQSAPATALKDYSPVRWRDLREWLALIDDKGQLLCIKE
                     PVDPDQELAAITFMATRRETAPALLFDKLEGDRFGARVLSNMLGSSKERYALAVGLDP
                     DLSITEMIVATRFIMSRRIAPERVAAATAPVNEIVLRGEDIDLTAFPAPKFWPGDGGR
                     YIGTGDITLTANPDSGRVNVGVYRQMLHGPRRIGLYCSPGKHGLLDREAWWARGEPCE
                     VVAAYGIDPVLFMLGAQAFGTNESELDVAGGIMGRAVELTDAEYVRLPILANAELVIE
                     GVLYPGDLEPEGPLGEFTGYYGRERSPQPVIEVKALHARRSPILTAALMAKYPSCEIG
                     AYYAIMRSARILDDLERIGVSGVVGAYAHPAAASGWGIVVVAMKQQHAGHAAQVLALA
                     AQCPAAAYYTKWIIAVDEDVDPTDFNEVMWALSTRCHPAEDIDVLRHTWSTGLDPSQY
                     ITEQRPYGSKALINACKPHRYIKQFPPSTLLRRDLYERVTARWAELGFVDQPPKLNVF
                     HQE"
     gene            complement(4202..5143)
                     /gene="hypB"
                     /locus_tag="VLJ17_03020"
     CDS             complement(4202..5143)
                     /gene="hypB"
                     /locus_tag="VLJ17_03020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016530 - metallochaperone activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase nickel incorporation protein HypB"
                     /protein_id="HSV21980.1"
                     /translation="MCGHCGCGISANATIHDLQTGKETMMEHRLADPTRHGAHHHRHA
                     DGRGHSHDHGHHQEDDHLHADGMPLEHGPHHELISGHGGPHLSVVELEARILAKNDAL
                     AMRNRAWFAGREILALNLVSSPGSGKTTLLERTIRDLKSELNLFVVEGDQATANDAER
                     IRAAGAPVVQVNTGAGCHLEADMVARGVRELRPGTGSIVMVENVGNLVCPAMFDLGEW
                     AKIVILSVTEGEDKPLKYPHMFRAAKVMILNKIDLIPYVEFDMERADAYAREVNPDIV
                     TLRLSALTDNGLSAWYEWLRQEIAAARSAAFDPRSVS"
     gene            complement(5157..6224)
                     /gene="hypE"
                     /locus_tag="VLJ17_03025"
     CDS             complement(5157..6224)
                     /gene="hypE"
                     /locus_tag="VLJ17_03025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013896566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase expression/formation protein HypE"
                     /protein_id="HSV21981.1"
                     /translation="MNIAPIVHMRRPGKVHVPAVTLAHGGGGKAMKDLIDDVFVETFG
                     HALLAPLEDQARFDLGSLAVHGDRLAFTTDSFVVDPLFFPGGDIGKLAVCGTVNDLAV
                     GGAVPLYLSCAIIIEEGVRIELLRKIAQSMATTAQRAGVSIVTGDTKVVQKGACDKLF
                     ITTTGIGVIRRGIDLGVHKARTGDVVLVNGLLGDHGAAILGARGDMALDSPIESDCAP
                     LNDLVNDLVIAAPNIRFVRDATRGGAATVLNEIAQASQVSIEIDEGATPIREQVKAFC
                     EILGLDPLYLANEGKIVAITSPTEAKAALAAMRAHPLGGGAAIIGNVVEGEAGRVTMR
                     TVFGGRRIVDMLVGEQLPRIC"
     gene            complement(6221..>7246)
                     /gene="hypD"
                     /locus_tag="VLJ17_03030"
     CDS             complement(6221..>7246)
                     /gene="hypD"
                     /locus_tag="VLJ17_03030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012592701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016530 - metallochaperone activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase formation protein HypD"
                     /protein_id="HSV21982.1"
                     /translation="QIMEVCGGHTHSIFRYGIEGMLPKAIELVHGPGCPVCVLPMGRV
                     DDCVAIADRPEVIFTTFGDAMRVPGSRKSLLQAKADGADIRMVYSPMDALTIARKNPD
                     REIVFFAIGFETTMPSTALTILQAESDGIANFSVFCNHITIVPTIKAILDSPDLQLDG
                     FLGPGHVSMVIGTSPYQFIAEFYRKPMVVAGFEPLDILQSIWMVLKQIKEGRAEIENQ
                     YARVVSEAGNSPALQAVLRVYELRQFFEWRGLGSIDHSGIKLRDSYAHFDAERKFAIP
                     NAKIADPKSCQCGEVLKGVIKPWQCKVFGSACTPETPVGALMVSSEGACAAYYQYGGV
                     KSHGAVA"
BASE COUNT         1458 a         2205 c         2109 g         1474 t
ORIGIN      
        1 cggtttcacg cgatgcggtg ccgttgccaa tggagatcag ttcgaccttg tgctgcttga
       61 caagcttgcc gagaatggcg agggcctcgt tccactggcg ctgcggttcg tgcgggtaga
      121 tcacagacgt cgcaaccacc ttgccggtgc catccaccac cgcgaccttg actccggtgc
      181 ggaaacccgg gtcgagaccc agggtgggac gtgcaccggc gggagcggcg agcagcaaat
      241 cccggagatt ggcggcaaat acacggaccg cctcctgctc ggccgcattc cacagccgca
      301 gccgcagatc gataccgaga tggacttgga ttttggaacg ccacgccttg cgggcggtat
      361 ccattagcca tttatcgccg ggacgtccgc gatcactgat accgcagcgg tgcataatcc
      421 gcagctcgta gcggtttggc ccggcgttcg ccgtggggct ctccggttcc atggagacgt
      481 ccaggatctc ttccttttcg gctcgaaaca gcgccagaac gcggtgcgac ggcgccttgg
      541 ccaggtcttc ggcgaagtcg aaatagtcgc tgaatttcgc gccagcttcc tgtttgccgt
      601 cgcgcacctt ggagacgagg cggcccaccg accacatctc ctcgcgcagc gccccaatca
      661 ggtcggcgtc ctcggcaaag cgttcgacca agatcgcgcg cgcaccgtcg agcgcagcgg
      721 ccacgtcggc aaccttctcg ccatcaatga agctcgcggc cgcgaccaac ggatcgtttt
      781 ccggtcgcgt cagcaacaca tcggccagcg gctcaaggcc cgcctcccgg gccatctcag
      841 ccttggtgcg acgcctcggt ttgaatggca gatagatgtc ttcgagccgg ctcttgctgt
      901 ctgcggcata aatcgccgct tggagagcgt cgtcaagctt gccctgttcg cggatcgaat
      961 cgaggatgac agtgcgccgc tcctcaagct cacgcaaata gcgcagacgc tcatcgagcg
     1021 agcgcaattg cgtgtcgtca agcgcaccgg tcacctcctt gcgatagcgg gcgatgaacg
     1081 gtaccgtcgc gccttcgtca agcagcgcca ccgcggcggc aatctgctcc tcgcggacgt
     1141 caagctctcg cgcgatctgt cggttaatgg aaattctcac gcacacacct attgctgcca
     1201 aaggggctca gagaccgccg cagcggcggc tcgactgcat attcctgccg gggcattgat
     1261 tcttcaaccc cgccgacaaa aaccttagat aaactggcaa gcatcagcac ctccagcgct
     1321 ccgcggcgcg acacgccgac gtcgcaaatt gctgccgtgc tgccgtgaca ccacaccatc
     1381 gatggttcat tactcaacct tgatgccgat ttcctttaca acttgctgcc aggtcgcaat
     1441 atcgcggacc aggaattcgg ccagttgctc agatgtcccg ccgcgcgtaa cgacgccttg
     1501 gttcgcggcg agttcgacca cgtgcggctc gcgtacgatc tcgttgacca ccttattata
     1561 gcgctcgata atctcgcgcg gcgttccggc tggcgccaac agcccgaacc atagttccgc
     1621 ttcgaatccc gctagacctt gttcggcaag cgtcggtagt tccgcagccg tgcgcacccg
     1681 ctctttgctg gcaacgccga gaatgcgcaa cgaaccattt ctcgccagcg gcgccgcgat
     1741 gctgagcgaa agaaatccgc ctgcgacgtg gccgccgaca atgtcctgtg tcgcgccggc
     1801 ggaacctcgg tacggcacat gcctgatatc gatcttcgtg atctgcttga gcaactccat
     1861 ggcgagatgg tgcggaccgc cgactccagg cgatccgtag ttcaattcgc cgtggtgctg
     1921 tctgacatag tcaataaact cgctcacggt cgttgctggc actgccggat gtacgcataa
     1981 cgcaagcgcg ccggccccga catcgatgat cggcacgaag cttttgatcg gatcgtaggg
     2041 cagggggctg aacaggctta cgttcatcgt gaatggatta cttgccatca gcagcgtgtg
     2101 cccgtcgggc gccgcccttg ccactatctg ggtgccgata ttgccggtag cgcccggctt
     2161 gttgtcaatc acgacggctt ggttccaacg cttctgaagc tcttcaccca ctatgcgcgc
     2221 cattacatcc ggcccggtcc ccggcgagta ggggacaaca atcgtgatcg gtcggttcga
     2281 caagccttga gccgcggcag atgcgagcat cgcggtgcca acaagcaggc atagacatga
     2341 tttgaacatt cgttcgatca tgagccaata gttcatggct gtcctcgtca gtgtgaacgc
     2401 gggggtacat taatatgagt aatagaactt agtcggtgta tacctgcatt gaagactaac
     2461 tgtggcgcga cgagcaacgc aagggcgaca ccttatcatg gaagagttga cagctttaca
     2521 atccgcgccg gctaccgcat tgaaggatta ctcgcccgtt cgttggcgag atctccggga
     2581 gtggctagcc ttaatcgacg acaagggcca gctgctctgc atcaaggagc ccgttgatcc
     2641 ggatcaggag ttggcggcca tcacatttat ggctacacgg cgcgagacag ctcccgcttt
     2701 gctgttcgat aaactcgaag gtgaccgctt cggcgctcgc gtgctctcaa acatgctcgg
     2761 ttccagcaaa gagcgttatg cgctcgcggt cggtctagac cccgatctct cgatcacaga
     2821 aatgattgtg gccacccgct tcattatgag ccgacgtatc gcgcctgagc gcgttgcggc
     2881 ggcgaccgcg ccggtcaacg aaatcgtcct gcggggcgaa gacatcgatc tgaccgcgtt
     2941 tccggcgccg aaattctggc cgggcgacgg cgggcgttat atcggtactg gcgacatcac
     3001 gttaacggcg aatccggata gcggtcgcgt caatgtcggg gtgtaccggc agatgctgca
     3061 tgggcctcgg cggatcgggc tctattgttc ccccggcaag cacggactgc tcgaccgcga
     3121 agcttggtgg gcacgtggag agccatgcga ggtggtcgcc gcctatggga ttgaccccgt
     3181 cctcttcatg ttgggcgcgc aggcgttcgg cacaaacgaa tccgaactcg acgtcgccgg
     3241 cggcatcatg gggcgcgcgg tcgagctaac ggacgcggag tacgtgcgcc tgccaatcct
     3301 cgcgaatgcc gaactggtga tcgagggcgt tttgtacccc ggagatctgg agccggaagg
     3361 cccgcttggc gagttcacgg ggtactatgg gcgcgaacgc tcaccgcagc ccgtcatcga
     3421 ggtgaaggcc cttcatgcac gccgttcccc aattctcacc gcagccttga tggcaaaata
     3481 tccatcctgc gagattggcg cgtattatgc catcatgcgc tccgcccgca ttctcgatga
     3541 cctggaacgg atcggcgtct ccggagtggt gggggcctat gcgcatccgg ccgccgcctc
     3601 cggttggggt atcgtggtgg ttgcgatgaa acagcaacat gccggccacg cggcccaagt
     3661 gctcgcgctc gcagcgcagt gtccagctgc ggcttattat accaagtgga tcatcgccgt
     3721 ggacgaagac gtcgatccga cggatttcaa cgaggtgatg tgggcgctaa gcacgcgctg
     3781 ccatcccgcc gaggacatcg acgtgttgcg ccacacgtgg tccaccggtc tcgatcccag
     3841 ccagtacatc accgaacaac ggccctacgg ctcgaaggcg ttgatcaacg cctgcaagcc
     3901 gcatcgctat atcaagcagt tcccgccttc gacattactg cgacgtgacc tttatgagcg
     3961 cgttacggcg cgctgggccg aacttggatt cgtggaccag ccacccaagc tcaacgtatt
     4021 tcaccaagaa tagtcacaat ccctgatagg ccgaaaccgc gaaaacagca cgcaatccct
     4081 aagtccgcga tgcgatcaag cttacattgg cgctttcggg ctgtctggag tcacaccggt
     4141 tgccggattt tcgatctcgc tgctcgaaca agctcggccg gtggaagggt tttgacatcg
     4201 gtcaactcac ggatctcgga tcaaacgctg cggagcgggc cgccgcgatt tcttggcgga
     4261 gccattcgta ccaggcactt aagccgttgt cggtaagtgc cgaaagtcgc agtgtgacaa
     4321 tgtcgggatt gacctctcgc gcgtaagcat cggcacgctc catatcgaac tcgacgtatg
     4381 gaatgaggtc gatcttgttt aggatcataa ctttagccgc gcggaacata tgggggtact
     4441 tcagcggctt atcctcgccc tcagtgaccg aaagaataac gattttcgcc cactctccga
     4501 gatcgaacat ggcggggcaa acaagatttc cgacgttttc gaccataacg attgatccgg
     4561 ttcccggtct cagttcgcga acgccgcgcg cgaccatatc ggcctcgaga tgacaaccgg
     4621 ccccggtgtt tacctgcacg accggtgcac cagcggcccg gatacgttct gcgtcgtttg
     4681 cggtggcctg gtcgccctcc acgacaaaaa gattcagttc ggactttagg tcacggatcg
     4741 tgcgctccag caatgtggtc tttcctgacc ccggcgaact gaccaaattg agcgccagaa
     4801 tttcgcgtcc cgcaaaccag gcccggtttc gcatggccaa ggcgtcgttt ttagccagga
     4861 tgcgagcctc cagttcgacg acggacagat gcggaccgcc atggccggag atcaactcat
     4921 gatgcgggcc gtgttcaagc ggcatgccgt cagcatgaag atggtcatcc tcttggtgat
     4981 ggccgtgatc gtgcgaatgg ccgcgtccgt ccgcgtgtcg gtgatgatgc gcgccatgac
     5041 gggttggatc ggccaggcga tgctccatca tcgtctcttt gccggtctgg agatcgtgga
     5101 tggtcgcatt tgcggaaatt ccgcatccac agtgtccgca catgagaccc tctcctctag
     5161 cagattcggg gcaattgctc gccgaccagc atgtcaacga tgcgtcgtcc gccgaaaacg
     5221 gtgcgcatgg tgacgcgacc cgcctcgccc tcgaccacat tgccgatgat ggcggcgccg
     5281 cctccaagcg gatgcgcgcg catcgcggca agcgccgcct tggcttccgt cggcgaggtg
     5341 attgcgacaa tcttgccttc gttcgcaaga tagagcggat cgagacccag gatttcgcaa
     5401 aaagccttga cctgttcgcg aattggggtc gccccttcat cgatctctat tgaaacctgc
     5461 gacgcttggg caatttcatt gagaaccgtc gcagcgccgc cgcgggttgc atcgcggacg
     5521 aaccggatgt ttggcgcggc gatcaccaga tcgttgacga gatcgttcaa cggcgcgcag
     5581 tcgctctcga tcggactatc gagggccata tcgcctcggg cgcccaggat cgccgcaccg
     5641 tggtcgccga gaagcccgtt gacgaggaca acatcgcctg tgcgtgcttt gtggacgccg
     5701 agatcgatgc ccctgcggat gacgccgatc cctgttgtgg taatgaaaag cttgtcgcag
     5761 gcgcctttct ggacgacctt ggtgtcacca gtgacaatgg agacaccggc acgttgggcg
     5821 gttgtcgcca tcgactgagc gattttccgc aacagttcga tgcgcacacc ttcttcaatg
     5881 atgatcgcgc aggagaggta cagcggaacc gctccgccaa ccgcaaggtc gttgacggtg
     5941 ccacaaacgg cgagttttcc aatgtcgccg cctggaaaaa acagagggtc aaccacgaat
     6001 gaatcagtcg tgaacgcgag acggtcgcca tgaaccgcca gtgaccccaa atcaaagcga
     6061 gcttggtcct ccaatggagc gagcagggca tggccgaagg tttcgacgaa aacgtcgtcg
     6121 atcaaatcct tcatggcctt accgccgccg ccatgagcca acgttacggc gggcacatgg
     6181 accttgcccg gtcgtcgcat gtggacgatg ggggcaatat tcatgctacg gccccgtgcg
     6241 acttgacgcc cccatactga tagtaagcgg cgcacgcgcc ttcggatgaa accatcaggg
     6301 cgccgaccgg cgtttccggc gtgcaggccg atccgaatac tttgcactgc cacggcttga
     6361 tgaccccctt gaggacttcg ccgcattgac aggacttcgg atcagcaatc tttgcgttgg
     6421 ggattgcgaa cttccgttca gcgtcgaaat gcgcatagct gtcgcgaagt ttgatgcccg
     6481 aatggtcgat ggaaccaagt cctctccact caaaaaattg ccgcagctca tacacccgca
     6541 agacggcttg cagcgccggg gagttgcccg cttcggacac gacccgagcg tattggtttt
     6601 cgatttctgc acggccttcc ttgatctgct tcaagaccat ccaaatcgat tgaaggatgt
     6661 cgagaggctc gaagcccgct acgaccatcg gcttgcggta gaactcggcg ataaattggt
     6721 acggtgacgt gccaataacc atcgatacat ggccaggccc cagaaacccg tcgagttgaa
     6781 gatctggact gtcgagaata gccttgatgg tcggcacgat ggtgatgtga ttgcaaaaca
     6841 ccgaaaaatt ggcgatgcca tcactctctg cctgcaagat tgtcaaggca gttgacggca
     6901 tcgtcgtctc aaacccgata gcgaaaaata cgatctcccg gtccggattc ttgcgcgcaa
     6961 tggtaagggc gtccatcggg gagtatacca tgcgtatgtc agcgccatcg gctttcgctt
     7021 gcagcaaact ctttctcgaa ccgggcaccc gcatggcgtc accgaaagtg gtgaagataa
     7081 cctccggtcg gtcggcaatc gccacacaat catccactct gcccattggg agcacgcaaa
     7141 ccgggcaacc cggtccgtgg accagttcga ttgctttggg cagcatacct tcgatgccgt
     7201 aacggaagat cgagtgggta tggccgccac acacttccat gatctg
//
LOCUS       DATILV010000134         1938 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2331951, whole genome shotgun sequence.
ACCESSION   DATILV010000134 DATILV010000000
VERSION     DATILV010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1938)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1938)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1938
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2331951"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..301
                     /locus_tag="VLJ17_03035"
     CDS             <1..301
                     /locus_tag="VLJ17_03035"
                     /inference="COORDINATES: protein motif:HMM:NF028004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome P460 family protein"
                     /protein_id="HSV21983.1"
                     /translation="NSVGESALRKGGPYPNGTVFLTDLHEFLLVDGAYVEGALKGLAV
                     MAKDSKKCASTGGWGFQFWAGGDPKKPIVTDAAKQCFECHQPKKDQDYVYSTYIP"
     gene            316..1320
                     /locus_tag="VLJ17_03040"
     CDS             316..1320
                     /locus_tag="VLJ17_03040"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV21984.1"
                     /translation="MKDAFENNSCGAVGMEGPRVSRRTGLKLGAAALGAPLLPALPAA
                     AQSQTTSDIRRTSMNSYVKVGQENSTPIEVYYEDHGSGRPVVLIHGWPLNGDAWEKQT
                     AALLSAGHRVITYDRRGFGRSSKPGIGYNYDTFATDLDALLNALNLTDVSLVGHSMGT
                     GEITRYIGKYGTKRLRKAVLIGTLGPYLVKAPDNPDGVDPKVFDDTRAGIKADRAVAL
                     MEFLKNFYSVGGADGKRVSERVIQANWAVAIGASPIGTLACVDSWIEDFRKDIARNNL
                     PTMIIHGDDDRILPADATSRRQAKMIKGVTYIEIKGGSHGIAWTRAEEINAELVKFLG
                     "
     gene            1344..1814
                     /locus_tag="VLJ17_03045"
     CDS             1344..1814
                     /locus_tag="VLJ17_03045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012591459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HSV21985.1"
                     /translation="MAFTIKVNSNTHAVDVDGDTPLLWVLRDVVGMTGTKFGCGRALC
                     GACTVHIDGVATRSCVTSIDSIGKSQVTTIEAIGATPAGAKVQKAWLEHEVVQCGYCQ
                     SGQIMSAAALLASNPHPTDADIDAAMSGNVCRCGTYGRIREAIKLAAQADQRGG"
     gene            1817..>1938
                     /locus_tag="VLJ17_03050"
     CDS             1817..>1938
                     /locus_tag="VLJ17_03050"
                     /inference="COORDINATES: protein motif:HMM:TIGR01409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HSV21986.1"
                     /translation="MVVDRIASRACQSRRTFLATSAAAGGGLMLNLSLPLSRSEA"
BASE COUNT          407 a          573 c          615 g          343 t
ORIGIN      
        1 caattcggta ggagaatccg cgctccggaa aggcggccca tatcccaacg ggaccgtgtt
       61 cttgactgac ttgcatgagt ttttgctggt cgacggcgct tacgtggagg gcgccctgaa
      121 gggtttggcc gtaatggcga aggattcgaa aaaatgtgcg tcgacgggtg gttggggctt
      181 tcaattctgg gcgggaggag atcccaagaa gccaatcgtg acggatgccg ccaaacaatg
      241 cttcgaatgt catcaaccaa agaaggatca ggactatgtc tattcgacct acattccctg
      301 agaggacata gtccgatgaa agatgcattc gaaaacaact cttgcggtgc ggtcgggatg
      361 gagggccccc gcgtgagtcg gcgtaccggt ctcaagcttg gggcagcagc tttgggcgca
      421 ccgttgctgc cggcattgcc cgcagcggcg caatcccaaa cgaccagcga catcaggagg
      481 acttccatga acagctatgt caaagtcggg caggaaaact ccacgcccat cgaggtctat
      541 tacgaggatc acggctcggg tcggccggtc gtactcattc acggctggcc cctgaacggc
      601 gacgcgtggg aaaagcagac cgcggcgctc ctgtccgccg gccatcgcgt gatcacgtat
      661 gatcgccgcg gcttcggccg atcgagcaag ccgggcatcg gctacaacta cgatactttc
      721 gcgactgatc tcgatgctct gttgaacgcc ttgaatctta ccgatgtgtc gctggtcgga
      781 cactccatgg gtaccggcga gatcacaaga tacatcggca aatacggcac caagcggctc
      841 cgcaaggccg tgctgatcgg cacgctcggt ccttacctgg tcaaggcgcc cgacaatccg
      901 gacggcgtcg atccgaaagt gttcgacgac acccgcgccg gcatcaaggc ggaccgggcg
      961 gtcgcgctca tggagttttt gaagaacttc tacagtgttg gcggggctga cggaaagcgg
     1021 gtcagcgagc gcgtcattca agccaactgg gcggtcgcaa tcggagcgtc gccgatcggc
     1081 accttggcct gcgtcgattc ttggatcgag gacttccgta aagacatcgc ccgcaacaac
     1141 ctgccgacca tgatcatcca tggcgatgac gatcgcatcc tgccggcgga cgcaacgtcg
     1201 agacggcagg caaagatgat caagggcgtc acgtacatcg agatcaaggg cggttcgcac
     1261 gggatagcct ggacccgcgc ggaggagatc aacgccgaac tcgtcaagtt cctcggctag
     1321 acgcagcctt cacggtggca gccatggcat tcaccatcaa agtcaacagc aatacgcacg
     1381 ccgtcgatgt cgatggcgac acgccgctcc tgtgggtgtt gcgcgacgtg gtcggcatga
     1441 ccggaacgaa gttcggttgc ggcagggcgc tgtgcggcgc ctgcaccgtg catatcgacg
     1501 gtgtcgccac tcgatcctgc gtcacatcga tcgacagcat cggcaagtcg caagtgacga
     1561 ccatcgaggc gatcggcgcg acgccggcag gcgcgaaggt ccagaaagcg tggcttgagc
     1621 atgaagtcgt ccaatgcggt tactgccaat cggggcagat catgtcggcc gcggcgctgc
     1681 tggcgagcaa cccgcatccg accgatgcgg acatcgacgc ggccatgagc ggcaatgtct
     1741 gccgctgcgg aacctatggg cgcatccgcg aagcgatcaa gctcgctgcg caagcggatc
     1801 aaagaggagg ctgaccatgg tcgtcgatcg catcgcttcc cgcgcctgcc agtcgcggcg
     1861 gaccttcttg gccacgagcg cggccgccgg cggcgggttg atgctgaacc tgagcctgcc
     1921 gctcagccga agcgaggc
//
LOCUS       DATILV010000135         9583 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1820528, whole genome shotgun sequence.
ACCESSION   DATILV010000135 DATILV010000000
VERSION     DATILV010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9583)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9583)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9583
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1820528"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            68..763
                     /locus_tag="VLJ17_03055"
     CDS             68..763
                     /locus_tag="VLJ17_03055"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSV21987.1"
                     /translation="MLRVLCARSMHVAVTALAQQFGANSGAAPDIVFEPMGALQARLA
                     AGDPADVLILAAPAIDALVRSGAIISASCADVARAPIGVAIREGAPAPDITTPEAFEA
                     ALIAARTIALSEPAVGGSAGIYLRDLFGRMGLAELIAAKTAPQKSGVAAADAVGRGEA
                     ELALTFIPELLQGRGVRILGPLPPPYHHATAYVAAILAHTGLLDAARAFLAALTAPDA
                     RGVWVTAGFEVGS"
     gene            complement(850..1479)
                     /locus_tag="VLJ17_03060"
     CDS             complement(850..1479)
                     /locus_tag="VLJ17_03060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009209234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HSV21988.1"
                     /translation="MIDLYTWTTPNGRKASIVLEELGLPYVAHAIDIGKDEQFKPEFL
                     KISPNNRIPAIVDRDNGFSLMESGAILLYLAEKAGRLLPTDKLKRYRVIEWLMWQMGG
                     PGPMFGQVHHFVKYNKGKAPYAEERYLKEAQRLYGVLDRRLADHEFVADDYSVADIAI
                     WPWVSRFEWQTIDLNQFPNVRRWYVTMADRPAVRKGYDVPKKVQEIPMP"
     gene            complement(1823..3640)
                     /locus_tag="VLJ17_03065"
     CDS             complement(1823..3640)
                     /locus_tag="VLJ17_03065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSV21989.1"
                     /translation="MGAPLLQLSRIALTFGGTPLLEDVDLVVSAGERLCLVGRNGSGK
                     STLLKIAARLIEPDRGTTFLKPDATIRYLPQEPDLSGFAAVADYVEAGLGPNDDRHAA
                     HYLMEQLGLRGDANPAALSGGAVRRAALARVLAPSPDILLLDEPTNHLDLPAIEWLER
                     ELDARQGAHVIISHDRRFLANLSDVTIWLDRGRARRTERGFAGFEAWRDDILVEEERD
                     RRKLDRKIEAEEHWMRYGVTARRKRNMRRVAGLQALRQRRRDARRAAGTVTMSVAESE
                     RSGALVIEAKGVSKRYGADPIVTDFSTRIVRGDRVGVVGPNGSGKTTLVDILTGTLAP
                     DGGTVRLGTNLQMATLDQHRESLNPDWTVSEALTGGRGDTVMIGGQAKHVVSYMRDFL
                     FTPEQARTPLRVLSGGERGRLMLARALAKPSNVLVLDEPTNDLDLETLDVLEEMIGDY
                     AGTVLLISHDRDFLDRVVDDVVAPEGNGKWLEYAGGYTDMLAQRGDDLRKIGAKPTAR
                     AAESNKSKSPRTTADLVKRKLNFNEKHALETLPGTIATLEIEIGRLQKLMADTTLYAR
                     DRATFDQVSSAMAAKQSELAVAEERWLELELLRDEINSA"
     gene            complement(3973..5472)
                     /locus_tag="VLJ17_03070"
     CDS             complement(3973..5472)
                     /locus_tag="VLJ17_03070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009029504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HSV21990.1"
                     /translation="MFPIPKPALSPNTYAYESEPMVKATGFREYDARWLFEREINLMG
                     VQALGMGLGTLIRQMQVRPEVVTGHDFRSYSASIKYALISGLMATGCKVQDIGLAVTP
                     MAYFAQFDLDVPCVAMVTASHNDNGWTGMKMGVNRPLTFGPDEMTRLKEIVLSARFDL
                     RGGGSYQFVENFPARYIADLTNRPKLKRRLKVVAACGNGTAGAFAPRVLEAIGCEIVP
                     LDCTLDHTFPRYNPNPEDMKMLHAIRDAVLANHADVGLGFDGDGDRCGVVDNNGDEIF
                     ADKVGVMLARDMSALHPGAKFVVDVKSTGLFVTDPVLQQNGVKVDYWKTGHSYMKRRT
                     HEAGALAGFEKSGHFFFNAPYGRGYDDGLVSAIAICDMLDRNPKKKMSDLKDALPKTW
                     QSPTMSPHCADETKYNIVDQVVKHFEVARASGESVAGQPIRDLVTVNGVRVTVQDGTW
                     GLIRASSNKPELVVVVESPVSDARMHDMFKALNGVLRTHKEVGAYNQTI"
     gene            complement(5605..6126)
                     /locus_tag="VLJ17_03075"
     CDS             complement(5605..6126)
                     /locus_tag="VLJ17_03075"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR02281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02281 family clan AA aspartic protease"
                     /protein_id="HSV21991.1"
                     /translation="MAAINSLDALIMGQIFFLVLVVFAAAVFAPRYLTPPQQNAVIAK
                     ASPEAAGPRSISISRGQSGHFWVDGRVDGRRLNFMVDTGASSIALREADAARLGIHPA
                     RREYTARVSTANGVVAAAPVVLSRVEIGDVIVRDVAAMVLPDDALGENLLGMSFLGQV
                     HWQYQSGKLVLEQ"
     gene            complement(6261..8825)
                     /gene="hrpB"
                     /locus_tag="VLJ17_03080"
     CDS             complement(6261..8825)
                     /gene="hrpB"
                     /locus_tag="VLJ17_03080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase HrpB"
                     /protein_id="HSV21992.1"
                     /translation="MPELIAALARSATVVLVAPPGAGKTTRVPLMLAAESWAGNKKIL
                     VLEPRRLAARAAAARMAKTLGERVGDTVGYRVRFGTKVSKRTRIEVVTQGVFTGLILD
                     DPSLEGISAVLFDEFHERALDADLGLALARDAQQGLREDLRLVVMSATIDGARIAKAL
                     GNAPVIASEGRAFDVETHYLGRDPTKPIESQVTDAVLRALRAEAGSILAFLPGAAEIR
                     RTQAMVRERCTDPAVDVFALHGALDFNAQDSAIAPAPLGRRKVVLATSIAETSLTIEG
                     VRVVVDSGLARVPRYEPDVGLTRLETVRVSRAAADQRRGRAGRVEPGVCYRIWDEPQT
                     AALEPFPQPEILAADLSSLVLDLAQWGVTDPVQLVFLDPPPTASLDEARTLLTDLGAI
                     DRSGRITPEGRLLNRLPLPPRLARMVVDADQEGAGHVAAQIAAVLTERELGGNDVDLR
                     HRVDALRRDRSARAEEARHMAKRWAEMAARPSPSRLVGEGRGDGGLRATVPHLPTPSL
                     QGGGERKRSVARGKGRPPPADGEPSLGAILALAYPERIAKNRGTTAGAFLLANGRGAY
                     VDPASPLAREPFLAVAELIGGAAQSRITLATAIDLADIEIRFADRLEDVEEVTCDPKT
                     LTLRARRLRRIGAVTLIEQPLPIRPNEVTAKLLVAAIVKVGLDRLPWTKALRQWRDRV
                     LFLRRAEGAEWPDMSNAGLAATAEAWLMPLLSDTTALDTLTASDFEQALHNMLPHNLR
                     RRLEAEAPTHFDAPSGSRVPIDYGAQEGPKLAIRVQELFGLSRHPAIAGGRVPLVIEL
                     LSPAHRPVQVTRDLPNFWRGSYAAVKSEMRGRYPRHPWPDDPTSAPATRRAKPRGG"
     gene            8999..>9583
                     /locus_tag="VLJ17_03085"
     CDS             8999..>9583
                     /locus_tag="VLJ17_03085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012497842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HSV21993.1"
                     /translation="MPTSSPTPHKGDHVFLVDGSSYIYRAFHALPPLTRKSDGLQLGA
                     VYGFCGMLLKLLRDMAPDQRPTHLAVVFDKSEKTFRNQLYPDYKAHRPDTPADLVPQF
                     GLIREAVLAFDLPSLEQLGYEADDLMATYVREACEAGARATIVSSDKDLMQLVNDRVV
                     MYDTMKDRRIGPAEVVEKFGVPPDKVIEVQALIGD"
BASE COUNT         1827 a         3034 c         2898 g         1824 t
ORIGIN      
        1 cgtctaattc caacttgtat cttcttcaaa gtaaaatgcc agagctcgca ccaccaggaa
       61 ggatgcaatg ctgagggttc tttgtgcccg gtcgatgcat gtggcggtaa ccgcattggc
      121 gcagcagttt ggagcgaact cgggcgcggc acccgacatc gtgtttgaac cgatgggtgc
      181 gctgcaggca cggcttgcgg ccggcgaccc tgcggatgtg ctgatcttgg ccgcgccggc
      241 catcgatgcg cttgtcagat ccggtgcgat tatttccgct agctgcgccg acgttgcgcg
      301 cgctccgatc ggtgttgcga tccgcgaggg tgcgcccgcg cccgatatca cgacgcctga
      361 agccttcgag gctgctttga ttgccgcacg caccatcgcg ttgagcgagc cggcggtagg
      421 tggctcggcc ggcatctact tacgcgattt gttcggacgc atgggccttg cggagttgat
      481 cgccgccaaa acagcaccac agaagagcgg cgtcgcggcg gctgatgcgg tcggccgcgg
      541 cgaagcggaa ctcgcgctca cgttcattcc ggaattgttg cagggcagag gcgtccgcat
      601 cctcggcccg ctgccgccgc catatcatca cgccacggct tacgtggccg caatattagc
      661 acataccggg ctcttggacg cagcgcgcgc attcctagcg gcgctgacgg cgcccgatgc
      721 acgcggcgtg tgggtgacag cgggatttga agtgggctcg taaataggca aaggagcccg
      781 tcccgcccgc tcttcaacgt ccacaagaaa gaggcaggcg ggacgcctgc agtcccccag
      841 ggtttctcct cacggcatcg gtatttcctg caccttcttt ggcacgtcat agccttttcg
      901 caccgccggg cgatcggcca tcgtcacata ccagcgccta acgttgggga attggttgag
      961 gtcgatagtc tgccattcga atcgcgaaac ccacggccag attgcaatgt cggctaccga
     1021 atagtcatcg gcaacgaatt catggtccgc caaccgtcgg tccaagaccc cgtagaggcg
     1081 ttgggcttcc ttgagatagc gctcctcggc atatggcgcc ttgcccttgt tgtatttcac
     1141 gaagtggtga acctgtccga acatcgggcc cggaccgccc atctgccaca tcagccactc
     1201 gatcacgcga tagcgcttga gcttgtccgt cggcaagagc ctgccggcct tctcggcgag
     1261 gtagagcagg atggcgcccg actccattaa actgaaacca ttgtcacggt cgacgatcgc
     1321 cggaatacga ttgttcggac tgatcttgag aaactccggc ttaaattgct cgtccttgcc
     1381 gatgtcgatc gcatgcgcca cgtaggggag gccgagttcc tcaagcacaa tagacgcctt
     1441 gcggccattt ggcgtggtcc aggtatagag atcgatcacg tttgaaggtt ccttcccgat
     1501 tgatccgcac gtcgtcgctg cggtgcctaa atcattcttc gaggcatcgc gagccaacgc
     1561 gcaatcgcgc ttgggcctgc gatgccctgc ggacgggctg acgtcctaat gggcaccgac
     1621 taaagggaca cggagcagtc gccaccatgt acctctgccc gattgttgcg tttcatccag
     1681 ttgcgtatgt tacgggcgtc ttggctttcc tcccgagacg gttcttgact aggcggcccc
     1741 accaagcaga catctcccat ctggtgcggg ccgctccttt cgccccgcat ttttttaagg
     1801 cggcgggggg atccccgcca actcaagcgc tgttgatttc gtcacgcagc agttccaact
     1861 ccagccatcg ctcctccgcc accgcgagtt ccgattgctt tgccgccatg gcggatgaaa
     1921 cctgatcgaa ggtggcgcgg tcccgcgcat agagcgtggt gtcggccatc aatttctgca
     1981 agcgtccaat ttcgatctcg agcgttgcga tcgttcccgg caacgtttcc aacgcatgct
     2041 tttcgttgaa gttcagcttg cgtttgacca gatcggcggt cgttcgtggt gatttggact
     2101 tgttcgattc ggccgctctg gcagttggct tggcgccgat cttgcgtaga tcgtcgccac
     2161 gttgcgccag catatccgta tatccgccgg cgtattccag ccatttgccg tttccttccg
     2221 gtgcgacgac gtcgtcgacc acccgatcga gaaagtcgcg atcgtgacta atgagaagca
     2281 cagtcccggc ataatcgccg atcatttctt ccaacacatc gagcgtttca agatcgagat
     2341 cgttggtcgg ctcgtcgagt acgagaacat tggacggctt tgccagcgcc cgggcaagca
     2401 tcagacggcc gcgctcgccg ccagagagta cgcgcaacgg cgtgcgcgcc tgctcggggg
     2461 tgaacaggaa gtcgcgcatg taactgacga cgtgtttcgc ctgtcctcct atcataacgg
     2521 tatcaccgcg accgcccgtg agggcctcgc ttacggtcca gtccggattg aggctttcgc
     2581 gatgctggtc gagagtggcc atttgcagat tggtgcccag ccgcaccgtg ccgccgtccg
     2641 gcgcgagtgt accggtaaga atatcgacaa gcgtggtttt gccgctgcca ttggggccaa
     2701 cgacaccaac tcgatcgccg cgcacgatgc gggtggaaaa atcggtcacg atggggtccg
     2761 cgccatagcg tttggagacg cccttcgcct cgatcaccaa tgctcccgac cgttctgact
     2821 cggccaccga catggtgacc gtaccggcgg cacgccgggc atcgcgtcgg cgttgacgca
     2881 aggcctgcag gccggccaca cggcgcatgt tgcgcttgcg ccgcgcggtg acgccgtagc
     2941 gcatccaatg ctcttctgct tcgatcttgc ggtcgagctt gcgacggtcg cgctcctcct
     3001 cgacaagtat gtcatcacgc caggcctcga accccgcaaa accacgctcg gtgcggcgcg
     3061 ccctgccgcg gtcaagccaa atggtgacgt cagaaagatt ggcgagaaag cgccggtcat
     3121 ggctgatgat gacgtgcgct ccttgccgcg cgtcaagttc cctctcgagc cattcgatgg
     3181 ccggaaggtc cagatgattg gtcggctcgt ccagcagcag gatatcgggg gacggcgcca
     3241 acacccgcgc caaagccgcg cgccgcaccg cgccgcctga gagggcagcc ggatttgcgt
     3301 cgccgcgcag tccaagttgc tccatgagat agtgagccgc atggcgatcg tcgttggggc
     3361 cgagacccgc ctccacataa tccgccacgg cagcaaatcc agaaagatca ggctcttgcg
     3421 gcaggtatcg gatggtcgcg tcgggcttaa ggaacgtcgt tccgcggtcg ggctcgatca
     3481 gccgagccgc aatcttgagt agggtggatt tgcccgatcc gttgcggccg acgaggcaca
     3541 gacgctcgcc ggccgagaca acgaggtcga cgtcttccaa cagcggcgtg ccgccaaagg
     3601 tcagcgcgat gcggctgagc tggagcagcg gtgcgcccat cttaaattcg gatcggatag
     3661 gtttcgttca tggcgctgat ttataccgcg ccgcgtcaaa gaagaagggc cacccggcgg
     3721 gcagcccttc cattgtcgaa ccgcggtccg gcatgcagac cgtgacgcct ggaatcacgc
     3781 ggcctggacc tcggtagagg caaggatcca gctcgcggtt gccggtgaac gcggcgatag
     3841 acaatgagac actggatcac ctcctttcgg ttggttgacg acgaatcaca ggctaatcgg
     3901 aaaagcttaa caatgtaaac tgttcacagc agcggagcac gtgattcgcc tctgcgtagt
     3961 gaaaactcat tttcatattg tctggttgta cgcgccgacc tctttgtggg tacgaagcac
     4021 accattaagc gccttgaaca tgtcatgcat gcgggcatcg gacacggggc tttccaccac
     4081 caccacgagt tccggcttgt tggaggaggc acggatcaag ccccaggtgc cgtcctgaac
     4141 tgtaacgcgc acgccgttga cggtgacgag atcgcggatc ggctggcccg ccacgctctc
     4201 gccgctggcc cgtgccacct cgaagtgctt caccacctga tcgacgatgt tgtacttggt
     4261 ctcatcggca caatgcggcg acatagtggg cgactgccac gtcttaggca gcgcgtcctt
     4321 gaggtctgac atcttctttt taggattgcg gtcgagcatg tcacagatgg cgatcgcaga
     4381 gacaaggccg tcgtcgtaac cgcggccgta cggcgcgttg aagaagaagt ggccagactt
     4441 ttcgaatccc gcaagcgcgc cggcttcgtg ggtgcggcgc ttcatgtagg aatgacccgt
     4501 cttccaatag tcgaccttga cgccgttctg ctgcagcact gggtcggtga cgaacaggcc
     4561 agtcgatttg acgtcgacaa cgaacttcgc acccggatga agcgccgaca tgtcgcgcgc
     4621 caacatgacg ccgaccttgt cggcgaagat ctcgtcgcca ttgttatcga ccacaccgca
     4681 gcggtcgccg tctccgtcaa agccaagacc gacatcagcg tggtttgcca gcaccgcgtc
     4741 gcggatcgcg tgcagcatct tcatatcttc gggattggga ttatagcgcg gaaaagtgtg
     4801 gtcgagcgtg caatcgaggg gaacaatttc gcagccgatc gcttcgagca cgcgcggtgc
     4861 aaacgctccg gcagtgccat taccgcaagc ggccaccacc ttgagccggc gcttgagctt
     4921 cggccggttg gtgagatccg caatatagcg ggccgggaag ttctcgacga actgatagga
     4981 accgccgccg cgcaaatcga accttgcact gagcacgatt tccttgagcc gcgtcatttc
     5041 atccggccca aaggtaagcg gccgattaac gcccattttc atcccggtcc agccattgtc
     5101 attgtgtgaa gccgtcacca tggcaacgca cggcacatcc aggtcgaact gagcaaaata
     5161 cgccatcggg gtgacagcca gtccgatgtc ttggactttg catcccgtcg ccatcaggcc
     5221 ggagatgagg gcatatttga tcgacgccga gtaactgcgg aaatcatggc ctgtgacgac
     5281 ttccggccgc acttgcattt ggcgaataag cgtaccgagg cccatgccca gcgcctgcac
     5341 gcccatcaga ttgatttccc tctcgaataa ccagcgtgca tcgtattcac gaaaccccgt
     5401 agccttcacc atgggctcgg attcataagc atatgtatta ggagacaggg caggcttcgg
     5461 gatggggaac atgtagacct caaacgggca ttgctggcgc acaggacata gccgatgcgg
     5521 cgcgctccgc aaagccttcg cgatgtgata cgacgtcctg gcccgaaacc gcacgccttt
     5581 gcggccggag tcaaatctgc ggcttcattg ctccagcaca agcttgccgg actggtactg
     5641 ccagtgtacc tggccaagaa aggacatgcc aagcagattt tccccgagcg cgtcgtcagg
     5701 caacaccatg gcggcaacgt cacgcacgat gacgtcgccg atttcgacgc gactaagcac
     5761 gaccggggcc gccgcgacga caccgttcgc cgtcgaaact ctggccgtgt attcgcgccg
     5821 agccggatga atgccaagtc gcgccgcatc agcttcgcgc agcgcaatgg aagacgcgcc
     5881 ggtatcgacc ataaaattga gacgccgtcc gtcaaccctg ccgtcgaccc aaaaatgacc
     5941 actttggccg cgcgagatcg agatcgaccg cggacccgcc gcctccggac tagcctttgc
     6001 gatcaccgcg ttctgctgcg gaggtgtgag atatcgcggc gcaaacaccg cagcggcgaa
     6061 aacgacaagc acgagaaaga aaatctgccc catgataagc gcatccaggc tgttgatcgc
     6121 cgccatcaca gcatgtcaac tctcggcgcc gcgctaacag gcttcgatca agtcgatggt
     6181 ttccaccccg atgcccaatg cgtggtcgcc acggtcatta aaattttacg gaacttgcgg
     6241 gctcggcgca ccgatgcggg ttaacccccg cgaggcttgg cacgccgtgt cgctggcgcc
     6301 gaagtcgggt cgtcgggcca gggatggcga ggataacggc cgcgcatttc ggattttaca
     6361 gcggcgtagc tgccgcgcca gaaattcggc aagtcccgag tcacctgcac tgggcgatga
     6421 gcgggcgaca gtaattcgat caccagcggt acgcggcctc ccgcaattgc cggatggcga
     6481 ctgagcccga acaattcttg cacgcggatt gcgagtttcg gaccttcctg cgccccatag
     6541 tcgatcggca cccgcgaccc ggatggcgca tcgaaatggg ttggcgcctc ggcctccagg
     6601 cgtcgacgta gattgtgggg caacatgttg tgaagcgcct gctcgaaatc cgatgcagtg
     6661 agcgtatcga gagccgtcgt gtcggataac agcggcatca gccacgcctc ggccgttgcc
     6721 gcaagtcctg cattggacat gtccggccat tccgcaccct cggcgcggcg cagaaacaag
     6781 acccgatcgc gccactgcct tagcgccttg gtccagggca atcggtcgag cccgaccttg
     6841 acgatcgccg caacgagcag cttcgcggtc acctcgttcg gtctaatcgg gagcggttgc
     6901 tcgatgagcg tgacggctcc gatacggcgc aaccggcgag cccgcaacgt cagcgttttc
     6961 ggatcgcagg taacctcctc gacgtcttca agtcgatccg cgaagcgtat ctcaatgtcc
     7021 gcaaggtcga tggccgttgc cagggtgatt cggctttgcg cggccccccc gatcagttcg
     7081 gcgaccgcca agaacggttc ccgcgccagc ggcgaagccg gatcgacata ggcgccgcgg
     7141 ccattggcca ggagaaatgc gcctgcggtc gtgccacggt tcttggcaat gcgttccgga
     7201 tacgcgaggg ccaggatggc cccgagcgat ggctcaccgt ctgctggagg tgggcggccc
     7261 ttgccccgcg cgacactgcg cttgcgctcc cctccccctt gtagggaggg ggtcgggaga
     7321 tggggcaccg tcgcgcgtaa acccccgtca ccccgcccct cccccacaag gcgggagggg
     7381 gaaggacgtg cagccatctc ggcccatcgc tttgccatat gtcgcgcttc ttcggcgcgc
     7441 gcggagcgat cgcgacgcag cgcatcaacg cgatgtcgca gatcgacgtc gttgccgccg
     7501 agttcgcgct ccgtgaggac agcggcgatc tgggccgcca catgacccgc cccctcctga
     7561 tctgcgtcaa ccaccatgcg ggcgaggcga ggcgggagcg gcaggcgatt gaggagtctg
     7621 ccttcggggg taatgcggcc ggacctatcg atggcaccaa gatcggtgag aagcgtgcgg
     7681 gcttcatcga gggatgcggt cggcggcgga tcaagaaata cgagctggac cggatcagta
     7741 acgccccact gggcgaggtc gagcaccagc gaagacagat cggccgcgag gatttccggc
     7801 tgcggaaagg gttcgagcgc cgcagtctgt ggttcgtccc atatccggta gcaaacaccc
     7861 ggttcgacac ggccggcacg gccgcggcgc tgatccgcgg ccgcacgaga tacccgcaca
     7921 gtttcaagac gcgtgagacc cacatcgggc tcgtagcgcg gcactcgggc gagtccggaa
     7981 tcgaccacca cccgcacgcc ttcaatagtc agcgacgttt cggcgatcga ggtcgccagc
     8041 accaccttgc gccggccgag cggcgccggc gcaatggcgc tgtcctgggc attgaagtca
     8101 agcgctccgt gaagcgcgaa gacgtcgacc gccggatcgg tgcagcgctc ccggaccatg
     8161 gcctgagtgc ggcggatttc ggcggctcct ggcagaaatg ccaggatcga cccggcttcg
     8221 gcgcgcaatg cgcgcaatac cgcatcggtg acttgagact cgatcggctt tgtaggatcg
     8281 cgacccagat agtgcgtctc gacatcgaac gcccggcctt cactggcgat caccggcgca
     8341 ttgcccagcg ccttggcgat gcgtgccccg tcgatcgtcg ccgacatcac gaccagtcgc
     8401 aaatcctcgc gcaggccctg ctgagcatcg cgcgcaagcg caaggccgag atcggcgtcg
     8461 agggcgcgct catggaattc gtcgaacagc acggcactaa tgccctcgag cgacggatcg
     8521 tcgagaatga gccccgtgaa gacgccctgc gtgacaacct cgatgcgggt tcgcttcgat
     8581 accttggtgc caaaccggac ccgatagccg accgtgtcgc cgaccctttc gcctagcgtc
     8641 ttcgccatac gggctgcggc ggcgcgcgcg gcgagcctcc gcggctccaa caccaggatt
     8701 ttcttgttcc ccgcccacga ctctgcggcc aacatgagcg gcaccctggt ggtcttgcca
     8761 gcgcccggcg gagcaaccaa cacaacagtc gcgcttcgcg ccagggcagc gatgagttcg
     8821 ggcatcgccg tatcgattgg aaggggcgca aacgcgtcca ctgggcgctc gttactgtct
     8881 tgtcgtgggg gcaccgcctc atcccttctt acacagcttc gcgcgccgcc tgtgcattgt
     8941 cttgcagccg gcggaatagc ccgttgccat tccgctcaca acactccaca ttgccgccat
     9001 gccgacaagc tcccctaccc cccacaaggg cgaccacgtc ttcctggtcg atggatcgtc
     9061 ctacatctac cgcgcctttc acgccctacc gccgctgacg cgcaagtcgg acgggttgca
     9121 gcttggcgcc gtctacggct tctgcggcat gctgttgaaa ctgttgcgcg acatggcgcc
     9181 ggatcaacgc ccgacccacc ttgcggtggt attcgacaaa tccgaaaaga ccttccgcaa
     9241 ccagctgtat cccgactaca aggcgcaccg gccggacaca ccggcggacc tggttccaca
     9301 gttcggcctc atccgcgagg cggtgctcgc tttcgatctg ccgagcctcg aacagttggg
     9361 ctatgaggcc gacgatctaa tggccactta cgtccgggaa gcttgcgaag ctggggcgcg
     9421 cgcaaccatc gtatcatccg acaaggacct catgcagctc gtgaacgatc gcgtggtcat
     9481 gtacgacacc atgaaggatc gccgtatcgg acccgccgag gtggtggaga aattcggtgt
     9541 gccgcccgac aaggtgatcg aggtgcaagc cttaatcggc gac
//
LOCUS       DATILV010000136         6003 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2587747, whole genome shotgun sequence.
ACCESSION   DATILV010000136 DATILV010000000
VERSION     DATILV010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6003
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2587747"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..263)
                     /locus_tag="VLJ17_03090"
     CDS             complement(<1..263)
                     /locus_tag="VLJ17_03090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21994.1"
                     /translation="MNTRHPGKHLRQMTALAIASTFLTQNFAWAVCSDGLSFPPGQQG
                     YVNTLLPPSLANMSPNIFTGTAGSVFVPDNSTFEGNNPATGTST"
     gene            957..1829
                     /locus_tag="VLJ17_03095"
     CDS             957..1829
                     /locus_tag="VLJ17_03095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSV21995.1"
                     /translation="MSLKGKTLFITGASRGIGLAVALRAARDGANVAIAAKTQTPHSK
                     LPGTIHTAAAEIEAAGGRALALAVDVREEEAVKDAIARTAAHFNGIDIVVNNASAISL
                     NRVADTDMRRFDLMHQINTRGTFMVSKYAIPYLAKAQNPHILMMSPPLDMAEKWFAPH
                     TAYTMAKFGMSMVVLGLAGELRPQGIAVNALWPRTTIATAAIKNLLGGEEIMRRSRRP
                     DILADAAYRIFAKPSKSFSGQFLIDDTFLASEGVSGFEQYRVDPQEPLASDFFVPGHI
                     EPPPGVVVPPREER"
     gene            1854..2039
                     /locus_tag="VLJ17_03100"
     CDS             1854..2039
                     /locus_tag="VLJ17_03100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV21996.1"
                     /translation="MNATISENDDDLPAEIDFQRWYARQVLSTKGETPEGHRRPNKIN
                     NAHARPGGFALRRHDAL"
     gene            2081..3010
                     /locus_tag="VLJ17_03105"
     CDS             2081..3010
                     /locus_tag="VLJ17_03105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase family protein"
                     /protein_id="HSV21997.1"
                     /translation="MTTLLVTHPACLDHLTPPGHPERPDRLRAIDRALEDERFQALAR
                     EQAPAATLDMITYCHPRDYVEEIRNANPRQGMVRLDADTSMSPGTFEAVLRAVGGAAM
                     ATDEVMAGKVDNAFCAMRPPGHHAETVRAMGFCFFNTAAIIARHAQKIHGAERVAVVD
                     FDVHHGNGTQQIFWSDPTVMYCSTHEMPLYPGTGARSERGLHNNIVNAPLRPGDGGEE
                     FRAAFESVILPRAAAFSPDFVVISAGFDAHMRDPLANLNLLEPDFAWATQKLMEIADA
                     SAKGRIVSVLEGGYDLQGLSASAAAHVTTLMRG"
     gene            3082..3333
                     /locus_tag="VLJ17_03110"
     CDS             3082..3333
                     /locus_tag="VLJ17_03110"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HSV21998.1"
                     /translation="MPENTNADVDQLSFERAIEELEAIVKRLEDGKVPLEESVAIYER
                     GEILKRRCEHLLRQAEARVEKITLDASAKPKGTEPLNVK"
     gene            complement(3335..3981)
                     /locus_tag="VLJ17_03115"
                     /pseudo
     CDS             complement(3335..3981)
                     /locus_tag="VLJ17_03115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018428028.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
     gene            complement(4107..4691)
                     /locus_tag="VLJ17_03120"
     CDS             complement(4107..4691)
                     /locus_tag="VLJ17_03120"
                     /EC_number="2.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004671 - protein C-terminal
                     S-isoprenylcysteine carboxyl O-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-S-isoprenylcysteine O-methyltransferase"
                     /protein_id="HSV21999.1"
                     /translation="MTPLIAKLAWGAGIVGWYVIRYPHQRRSRKTPIASRRERMREYV
                     LLAISFVGLFIVPVIYVTTGEPRVAGYPFHPLLAWVGTLVFAFALLLFHRTHRDLGRF
                     WSVTLEIRQTHQLVTTGIYRHVRHPMYAAFFLWAIAQALLLPNWVAGLAGLIGFGTLF
                     AFRVRREEQMMEATFGDAYRAYAAHTWRVVPGLF"
     gene            complement(4688..5911)
                     /locus_tag="VLJ17_03125"
     CDS             complement(4688..5911)
                     /locus_tag="VLJ17_03125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22000.1"
                     /translation="MVQKRYFFHASGFDPYDATGRYRRFVREVARFATTWNVKAQVCP
                     THENGAGDGHWTVTTQGPDWRVLTSFELLDWSDIVRSEVRQPAARLLRQGTATLADLV
                     VTGTASRYFAANWRYGIFFLVPFLNVFLFAAAALATGGCFAAAITAAFASVIFGVVAG
                     AWVAALVFAALMRWPGERLRVAQGLADWIFAREYMRGRHSEMEARIEAFVARVVACAR
                     RADVDEIVVAGHSLGATVAVDVLARAFDRDPALGRHGPKLCLLTIGATIPKLALHPGG
                     GWLREKARRLAAEPSLAWAEYQARDDIISFHKFHPVRLTRLVESDALGRPVIRRVQAH
                     QMLCAPTLRRFRFNYMRLHYQFVMANERRTVYDYFMLMCGPAPFFHTIMQPNGPDDLY
                     AADGSLRDVVESRVS"
BASE COUNT         1253 a         1859 c         1831 g         1060 t
ORIGIN      
        1 gtgctcgttc ccgtggccgg attattgccc tcgaaggtcg aattatccgg gacgaagacc
       61 gatccagccg tgcctgtgaa aatgttcgga gacatgttcg ccagcgatgg cggaagcaac
      121 gtattcacgt agccttgttg cccaggcgga aagctcagcc cgtccgagca caccgcccaa
      181 gcgaagttct gggtcagaaa ggttgaggcg atcgccaaag cagtcatttg gcggagatgt
      241 ttgccggggt gtcgcgtgtt catatcaagc cctcgttgta agcgaattat caggattggc
      301 gtgatagctt tccaagagac ggtttttgtt cgaatgcttg ttttgggtcg aatgtggccg
      361 gggcaagctg gaccacatcc tggttgcgaa caatcggcaa gaggtcgagg gtggtcgggc
      421 gaaggtcgga ggcgttgcgg cgcgccgccg gcttttgatc actgcacttt aggctgaacg
      481 ccgtttccct ttagtccgaa ccgcaatccc gaaatcaccg tttgagcggc catatttctt
      541 tgacgcgtcg gcagcaaagg tgtgcctggc caagcgcttc actgtgaaat ggggcacgca
      601 ttggccggct gaccgaggtc gcggggacca gacggacaat tctctgtgcc cctggataaa
      661 ttccctgccc gcacaaaaaa atccatgccc ctaaattgca gggaagttgc cgctatgcgc
      721 tggaattgca gcacgaattg acgtcggagc cgtcgaaacg gctgcagagt tgcaaaagtc
      781 tccaaattcc ctgccagcag gggatttcgc gagaccaagg cgggctatgg gggaaccgac
      841 cacgtcggag cgcccagggg cctcgcaacc tatctgaagc ttgtgggccc acctaggatc
      901 gcttcgcgat tcgctgtctt cccggcatag ttcgcaacct gacgcaggag ccccccatgt
      961 cgctcaaggg taagacgctg ttcatcaccg gtgcctcgcg cggcatcggg cttgcggtgg
     1021 cgctgcgcgc cgcgcgcgac ggcgccaatg tcgcaatcgc ggcgaagacg cagacgcccc
     1081 attccaagct gcccggtacc atccacaccg cagcggccga gatcgaggcg gcaggcgggc
     1141 gggcgctcgc gctcgcggtc gacgtgcgtg aggaagaagc cgtcaaggat gcgatcgcgc
     1201 gcaccgcggc gcacttcaac ggcatcgaca tcgtggtcaa caatgcgagc gccatctcgc
     1261 tcaaccgtgt cgccgacacc gatatgcgcc gcttcgacct gatgcatcag atcaatacgc
     1321 gcggcacgtt catggtgtcg aaatacgcga tcccgtatct cgccaaggcc cagaacccgc
     1381 acatcctgat gatgtcccct cccctcgaca tggcggaaaa atggtttgct ccgcacaccg
     1441 cctacaccat ggccaagttc ggcatgagca tggtggtgct ggggctggcg ggcgaattgc
     1501 ggccgcaggg catcgccgtc aatgcgctgt ggccgcgcac caccatcgcg accgcggcga
     1561 taaagaacct cctgggcggc gaagagatca tgcgccgctc gcgccgcccc gatattctcg
     1621 ccgatgccgc gtaccgcatc ttcgccaagc cgtccaagag cttctcgggg caatttctga
     1681 tcgacgacac tttcctggcg agcgaaggcg tcagcggctt cgaacagtat cgtgtcgatc
     1741 cgcaggagcc gctggcgtcg gatttcttcg tcccgggcca catcgagccg ccgcccggcg
     1801 tcgtggtgcc gccgcgcgag gagcggtgat gaagcctatg tgagggaacc gcaatgaacg
     1861 caaccatctc ggaaaacgac gacgatctgc ctgctgaaat cgattttcag cggtggtacg
     1921 cgcggcaagt tctatcaacc aaaggcgaga ctccagaagg ccatcgccgt ccaaacaaaa
     1981 taaacaacgc acatgcaaga cctggcggct ttgcgcttcg caggcacgac gcgctataag
     2041 gcgtcaccat tcgcagcgct ttcgaagaat cggccgctcc atgacgaccc tcctggtcac
     2101 ccacccggcc tgcctcgatc atctgactcc gcccgggcat ccggaacggc ccgaccggct
     2161 gcgtgcgatc gaccgggcac tagaggatga gcgctttcag gccctcgcac gcgagcaggc
     2221 cccggccgcg acgctcgaca tgatcacgta ctgccacccc cgcgactacg tggaggaaat
     2281 tcgcaacgcc aacccccgcc aaggaatggt gcggctcgac gccgacacct ccatgtcgcc
     2341 cggcaccttc gaggcggtgt tgcgggccgt cgggggtgcc gccatggcga ccgacgaggt
     2401 gatggccggc aaggtcgaca acgcgttctg tgccatgcgc ccaccgggcc accatgccga
     2461 gaccgtgcgg gcgatgggct tctgcttttt caacaccgcc gcgatcattg cccgccatgc
     2521 ccagaaaatt cacggcgccg aacgcgtcgc ggttgtggat tttgacgttc accacggcaa
     2581 cggcacccag cagattttct ggtccgatcc gactgtaatg tattgctcga cccacgaaat
     2641 gccgctttat cctggcaccg gcgcgcgatc cgagcgcggc ctgcacaaca acatcgtcaa
     2701 tgcgccgctg cggcccggcg acggcggtga agagttccgc gcggccttcg agagcgtgat
     2761 cctgccgcgt gctgccgcct tcagtccgga cttcgtggtg atctcggctg ggttcgacgc
     2821 tcacatgcgc gatccgctcg ccaatctcaa tctgctggag ccggatttcg cctgggccac
     2881 ccaaaagctc atggagatcg ccgacgcgag cgccaagggc cgcattgtct cagtgctgga
     2941 aggcggctac gacctgcagg gcctgtccgc ctcggcggca gcgcacgtca ccacgctaat
     3001 gcggggttga acgacaaagc cattgacgga ggaaatttgg tccgtgaaga attgtccgag
     3061 aatgacctgt tggagaacaa cttgcctgag aataccaacg ccgatgtcga ccaattgagt
     3121 ttcgagcggg cgatcgagga actggaggcg atcgtcaagc gcctcgaaga cggcaaggta
     3181 ccgctcgaag aatccgtcgc catctacgag cgcggcgaaa tccttaagcg gcgctgcgag
     3241 cacctgttgc ggcaggccga agcgcgggtc gaaaagatca cgctcgatgc gtcggccaag
     3301 ccgaagggaa ccgagcccct gaatgtgaaa tagatcagtc agctggaccg gcgaacagcg
     3361 cgagattgcc gtctgggtct ttgacgatga aggttttagc gccccagggc tccctcctga
     3421 gcgtttgaaa aaatataaca cccgcctgaa actccaggaa aagctgcttg atctcatcat
     3481 gcgtctcgac gcccatatcg gcggacagca agctctcccg gtccctgcgt gcgggatcga
     3541 tgaccggatc atcaacgcat tggaggttga tgagcccgcg gtctcgtctc acctgggcat
     3601 aaaagggcgg ctcgccgtat gtgaagacga tggagaagcc gagcttgcgg gtgaagaaat
     3661 ctcatgacgc cttgatgtct gtgacaaaca gttgcgcagc cgtcgcggcg atcatggcct
     3721 tgggtgtggt ctcagcggct tgatccagca tggtcgaaag tccttccttg agtgcgtgcc
     3781 agcacggaaa gccgtgtagc cgagcgacca gctcgtgggc atcactgagc ttgaatctgt
     3841 gcgcgccaaa acttcaggat cgctcaaatg tcggaaacga ggcaggacac gtctgatctg
     3901 ctccgcgacc ggatagtatc ggttgcgatg ccggcgcaga atgagcttgg cctgcttttt
     3961 gaggttgtcg agattacgca tggcgcacta cgttgacgtt tgcgatttac gtctcgtagg
     4021 tgggctttgc gccttcggca ccgcggccga tgcgccctac agcaaccgag caagattggc
     4081 gaagccaaac cgagacgtca acagcatcaa aacagacccg gcacgacccg ccaggtgtgc
     4141 gccgcgtagg cccgatacgc atccccaaaa gtcgcctcca tcatctgttc ctctcgcctg
     4201 acccggaacg cgaacagcgt accgaagcca ataaggccgg cgaggccggc gacccagttg
     4261 ggcagcagca gggcctgcgc gatcgcccac aggaagaacg ccgcatacat tggatgacgc
     4321 acatgacgat agatgccggt ggtgaccaac tgatgggtct gccggatttc cagcgtcacc
     4381 gaccagaacc ggccgagatc gcggtgggtg cggtggaaca ggaggagcgc aaaggcgaat
     4441 accaaggttc caacccacgc tagcagcgga tggaacggat agcccgcaac ccgtggctcg
     4501 ccggttgtca cgtagatcac gggcacgatg aacagtccga cgaacgagat cgccagcagt
     4561 acgtattccc gcatgcgctc gcgccgcgac gcgatcgggg ttttgcgcga acgtcgttgg
     4621 tgcggataac ggatcacata ccagccaacg attccggcac cccacgccag cttggcgatg
     4681 agcggcgtca cgagacacgg ctttctacga cgtcgcgcaa cgaaccgtcg gcggcgtaca
     4741 gatcgtcggg tccattcggc tgcatgatgg tgtgaaaaaa gggcgccgga ccgcacatca
     4801 gcatgaaata atcgtagacc gtgcgccgtt cgttcgccat cacgaactgg tagtgcagcc
     4861 gcatgtagtt gaagcgaaac cggcgcagtg tcggggcgca cagcatttgg tgagcctgca
     4921 cccggcggat gaccggacgg ccaagtgcat cggactcaac cagacgggtg agcctcacgg
     4981 gatggaattt gtgaaagctg atgatgtcgt cgcgcgcctg gtattcggcc caggcgagcg
     5041 aaggctcggc tgccaggcgc cgcgccttct cgcgcaacca tccgcccccc ggatgcaggg
     5101 cgagcttggg gatggtcgcc ccgatggtga gcaggcatag cttcggcccg tgacgcccaa
     5161 gcgctggatc acgatcaaag gcgcgcgcca acacatcgac cgcgaccgta gcaccgagac
     5221 tgtggccagc gacgacgatc tcgtccacat cggcgcggcg cgcgcacgcg acgacgcgtg
     5281 cgacgaaagc ctcgattctc gcctccattt cggaatgccg gccccgcatg tattcgcggg
     5341 cgaagatcca gtccgcgagc ccctgagcga cgcgcaagcg ctcacccggc caccgcatca
     5401 acgccgcaaa taccagcgcg gcaacccacg cgcccgcaac aacgccaaaa atgacggacg
     5461 caaacgctgc ggtaatcgct gccgcgaaac atccgccggt agcaagcgcc gccgcagcga
     5521 acaggaacac gttgaggaac ggcaccagga aaaatatccc gtagcgccaa ttggctgcga
     5581 aatagcgcga tgccgtgccg gtgacgacga ggtcagcgag ggtcgctgtg ccttgccgca
     5641 gcagccgggc ggctggctgc ctgacctcgc tgcgcacgat gtcgctccaa tcaagcagct
     5701 caaacgaggt aaggacccgc cagtctggac cttgcgtggt cacagtccaa tggccgtcgc
     5761 cggcgccgtt ttcgtgcgtc ggacaaacct gtgctttcac gttccaggtc gtggcaaatc
     5821 gggccacttc tcgcacaaat cggcgatatc ggccggtagc atcgtacgga tcgaatcccg
     5881 acgcatgaaa aaagtaacgt ttttgaacca tcgttccgga ttcgcattct tgattaggta
     5941 tgtacttcgc tcacccgttt agccgatccg gcggggaccg ccagcaccga aatattctgg
     6001 tag
//
LOCUS       DATILV010000137         4448 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4375489, whole genome shotgun sequence.
ACCESSION   DATILV010000137 DATILV010000000
VERSION     DATILV010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4448)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4448)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4448
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4375489"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..340
                     /locus_tag="VLJ17_03130"
     CDS             <1..340
                     /locus_tag="VLJ17_03130"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF012439.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HSV22001.1"
                     /translation="LVDGSLDEDRVRKVVRLVLQSKRRGWVALVWDFRRLVKLDCSRR
                     TANVESATPLPADLQASVRSDLERVYGPKLSISFARNQALIGGMRVKVGSDVYDNSVK
                     ARLAALESRF"
     gene            387..1904
                     /gene="atpA"
                     /locus_tag="VLJ17_03135"
     CDS             387..1904
                     /gene="atpA"
                     /locus_tag="VLJ17_03135"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF009884.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HSV22002.1"
                     /translation="MEIEAEIDAARAATAKQNVGVIREIADGVARIEGLTEAMLNEMI
                     DLGHGITGLALNLDQNEVGVIILGDYTQLGEGDEVRTTGKLLQVPVGKGLLGRVVNTL
                     GQPLDGDGPIKSDTAYPVEKLAPGIVRRRPVGQPVQTGIMSIDAMIPIGRGQRELIIG
                     DRSTGKTTICIDTIINQARLNKAAEAAGDKDYRPLYCIYVAIGQKQSSVARIVSVFEE
                     AGAMPYTIVLASPASDSATNQYLAPFAGTAMGEWFMDNGMDALIVFDDLSKHAVAYRQ
                     VSLVLKRPSGREAYPGDVFYLHSRLLERAARVGEKYGNGSLTALPIIETQAGDVSAYI
                     PTNVISITDGQIYLETDLFYQGIRPAISVGLSVSRVGSAAQLKAMKQVAGQLKGDLAQ
                     FRELAAFTQFGSELDARTKAQIDRGKRIIEIFKQPQYNPIPVEVQVSVIWAVQNGYMD
                     SVPLDRIKEYQAKLSDFLTTRKTDLLHKIVHEKALSDAIREELKAAADTFQKTWQ"
     gene            1935..2801
                     /gene="atpG"
                     /locus_tag="VLJ17_03140"
     CDS             1935..2801
                     /gene="atpG"
                     /locus_tag="VLJ17_03140"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit gamma"
                     /protein_id="HSV22003.1"
                     /translation="MHSTRDLRHRIRSVGNTARITKAMQMVAASKMRKAQQAAIAGRP
                     FVRLLYRMQREVTTGIGDLSHPLLERREVRKRAIILIGTDRGLCGALNSNVFRLALQF
                     DPVSTLFIAVGRKAAQLVASTRRTLAAEFVYGDTPRFEEARAIASFARDLFLKKEVDE
                     VRVVTTEFVNTITQKAINLEFLPVGEIKNLEIPGAEPEDRLTGDTAEFVFEPQPKAIL
                     SYLLSHYLNIYIYEALLNAKASEQSARMVSMKNATDNANTLIKDLTIEYNKLRQGNIT
                     NELLEIAGGQAA"
     gene            2848..4257
                     /gene="atpD"
                     /locus_tag="VLJ17_03145"
     CDS             2848..4257
                     /gene="atpD"
                     /locus_tag="VLJ17_03145"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019519448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HSV22004.1"
                     /translation="MSTGKIVQVVGPVVDVEFPDALPGIYNALTVEYGIQDGPVKLTL
                     EVQQHLGDNLVRAISMSGTEGLKRGFDVVDSGGPIHMPVGDGVMGRMFNVTGDPVDER
                     GPVQADKYYPIHRLPPPLVDQSVSPQILPTGIKVIDLICPFLKGGKVGAFGGAGVGKT
                     VVIMELINNVAKLHGGVSVFAGVGERTREGNDLYNEMSAAGVINQKDLSASKIALVYG
                     QMNEPPGARLRVALSGLAITEYFRDEKNQDVLLFIDNIFRFSQAGSEVSSLLGRTASA
                     VGYQPTLAAEMGALQERITSTANGSITSFQAVYVPADDLTDPAPATTFAHLDATIVLE
                     RAIAELGIYPAVDPLASTSRALAPEIVGEEHYAVARGVQKVLQRFKDLQDIIAILGID
                     ELSPEDKQTVFRARKIQRFLSQPFSVAQVFTGRDGRQVPVAETVRGFREILDGKHDAV
                     PEDNFYMKGGIDDVIAAQA"
     gene            4259..>4448
                     /locus_tag="VLJ17_03150"
     CDS             4259..>4448
                     /locus_tag="VLJ17_03150"
                     /inference="COORDINATES: protein motif:HMM:NF014838.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HSV22005.1"
                     /translation="MAATLTLEIVTPSAVAYSRDVEMVTLPAVDGQIGVYPQHVPLMT
                     RIVPGEIVVRRDGRDEYLA"
BASE COUNT          977 a         1238 c         1321 g          912 t
ORIGIN      
        1 cctcgtcgat ggatcgctcg atgaggaccg cgttcgtaag gttgtccggc tagtcctcca
       61 atccaagcgc cgtggttggg tcgcccttgt gtgggatttt cggcgcctgg tgaagctcga
      121 ttgttcccgg cgcacggcga acgtcgaaag cgccacaccc ttaccggctg atttgcaagc
      181 gagcgtgcgg tcggatctcg agcgagtgta tggcccgaag ctaagcatct cgttcgcacg
      241 taaccaggcg ttgatcggcg gcatgcgcgt caaagtgggc agtgatgttt atgacaacag
      301 cgtcaaggcc agactggccg ctcttgaaag tcgcttttga atctaagcag ttgtcaggtg
      361 aggaatagca tatggctgac cttttgatgg aaattgaagc tgaaattgac gcagcacggg
      421 cagcgacggc gaagcaaaat gtaggtgtca ttcgagagat cgctgacggc gtcgctcgaa
      481 tcgaaggcct caccgaggca atgctcaacg agatgatcga tctcggccac ggcattacgg
      541 gcctggcgct aaacctcgat cagaatgaag tcggagtgat cattttaggc gactacacgc
      601 agctcggcga gggagacgag gtccgcacta cgggcaagct gctgcaggta cctgtcggca
      661 aaggcctcct cgggcgtgtc gtgaacacgc tgggacagcc actggatggg gatgggccca
      721 ttaagagtga cacggcttat cccgtcgaga aactcgctcc tggcatcgtt cggcgacggc
      781 cggttggaca gcctgtgcaa acgggcatca tgtcgattga cgcgatgatt ccaattggcc
      841 gcggccagcg cgaactgatc atcggtgatc gttcgacggg gaagacgacc atctgtatcg
      901 acaccatcat taatcaggct cgtctgaaca aagcggctga ggcagcaggc gataaggact
      961 atcggccgct atactgcatt tacgttgcga tcggccagaa gcaatccagt gttgccagga
     1021 tcgtcagcgt attcgaagaa gccggcgcga tgccttacac catcgtcctc gcttcacccg
     1081 cgtccgattc cgccaccaat cagtacctgg cgccattcgc cggaacggcc atgggcgagt
     1141 ggttcatgga taacggcatg gacgcactga ttgtctttga cgatctgtcg aaacacgctg
     1201 tggcttaccg ccaggtcagc ctggttctaa agcggccttc gggtcgtgaa gcgtatcccg
     1261 gcgacgtttt ttatctacat agccggttgc tcgaacgtgc agcccgggtc ggagaaaagt
     1321 atggtaacgg ttcccttacg gcgctcccca tcattgaaac gcaggctggg gatgtctctg
     1381 cttacatccc aaccaacgtt atatcgatta cggatggaca aatctattta gagaccgatc
     1441 tgttctatca agggatccgc cctgcgattt cggtcggctt gtcggtttcg cgagtgggat
     1501 ccgcggcgca gctgaaagcc atgaagcaag ttgccgggca gctcaagggc gatcttgctc
     1561 aatttcggga attggctgcg ttcacgcagt tcggttcaga actggatgcc aggacgaaag
     1621 cacagattga tcgcggcaag cgcatcatcg aaatcttcaa gcagccccaa tacaatccga
     1681 ttcccgttga agtccaggta tcggtgatct gggcagttca gaacggttat atggattctg
     1741 tgccgctgga ccgtatcaag gagtaccagg caaagcttag cgacttcctc accacacgca
     1801 agacggacct gcttcataaa atcgtgcacg aaaaggcgct cagcgacgcc atacgtgagg
     1861 aattgaaggc tgcggccgac actttccaaa aaacgtggca atgagcgccg catttcagtt
     1921 tgtgagtatc gaccatgcat agcacccgcg acctccgcca ccgcattcgg tctgtgggga
     1981 atacagcacg tattactaaa gcgatgcaga tggtggccgc atccaagatg cgcaaggcac
     2041 aacaggcggc tattgctgga cgaccttttg tgcgcctctt gtatcgcatg cagcgtgagg
     2101 ttacgacagg gatcggcgac ttgagccatc cgctgctcga acggcgcgag gtccgcaagc
     2161 gcgcgatcat cttgatcgga acagacagag gcttatgcgg agcgctcaac agcaacgtgt
     2221 ttcgcctggc gctccaattc gatccggtgt ccacgctctt tatcgcggtt ggacgcaaag
     2281 ccgcgcagct cgtggcttcg acccgccgga ctcttgctgc cgaatttgtc tatggcgaca
     2341 cgccacgatt cgaagaagca cgggcaattg caagttttgc ccgcgacctt ttcttgaaaa
     2401 aggaagtaga cgaagtgcgc gtcgtgacga cggagttcgt taacacgatt acgcagaagg
     2461 cgatcaacct ggagtttctg ccggtcggcg aaatcaaaaa tctggagata cctggagcgg
     2521 agccggaaga ccgactgacg ggcgacaccg cggagttcgt ctttgaacct caaccaaagg
     2581 ctatcctgag ctatctccta tcgcactatc tcaacatcta catttatgag gcgctgctga
     2641 atgccaaagc gagtgagcaa agcgcccgca tggtatcgat gaagaacgcc acggataatg
     2701 ccaatactct gatcaaagac ttgacgatcg aatacaacaa gctgcgtcag ggcaatatca
     2761 cgaacgagtt gttggagatt gccggcggtc aggccgcttg atcggaaatc atttcgactg
     2821 cgcatttatt gagacgaggt tcttcacatg agcacaggca aaatcgttca agtcgtcggt
     2881 ccggtcgtgg acgtggaatt ccccgacgca ctacctggga tctataacgc cttgactgtt
     2941 gaatacggga ttcaggatgg tcccgtaaag ctgacacttg aagtgcagca gcatcttggg
     3001 gacaacctgg ttcgggcaat ctccatgtcg ggaaccgaag gtcttaaacg cggctttgac
     3061 gttgtggata gcggcggccc aatacacatg ccggtcggag acggtgtcat ggggcgtatg
     3121 tttaacgtca ctggagatcc agtcgacgag cgcggaccgg ttcaagcgga taaatattat
     3181 ccgatccatc gtcttcctcc accgctggtt gaccaatccg tatcaccaca gatcctccct
     3241 accggcatca aagtcatcga cctgatttgc cccttcctga aaggcggcaa ggtgggagcg
     3301 ttcggcggcg ccggagtcgg caagacagtg gtcatcatgg agcttattaa taatgtcgcc
     3361 aagctgcatg gcggagtgtc ggtctttgcg ggtgttgggg aacgcacacg cgaaggaaac
     3421 gatctctaca acgaaatgtc tgcagctgga gtcatcaatc agaaagacct gagcgcttcc
     3481 aaaatcgctc tggtgtatgg ccagatgaac gaaccgcccg gcgcgcggct gcgcgtggct
     3541 ttgtcgggcc ttgcgatcac cgaatacttt cgggatgaga agaatcagga cgttttgctc
     3601 ttcatcgaca atatctttcg gttttctcaa gccggatcgg aagtatcgtc actgctcgga
     3661 cgcaccgcca gcgcggttgg atatcagcca acacttgctg ctgaaatggg tgccctgcag
     3721 gagcgcatca cgtccacggc gaacggttcg atcacgtcgt tccaggcggt gtacgtgccg
     3781 gccgacgacc tgaccgaccc ggcgccggcg acgaccttcg cgcatctcga tgcgacgatc
     3841 gtcctcgagc gcgccatcgc ggagctcggc atctatccgg ccgtcgatcc gctcgcgtcc
     3901 acctcgcgcg cgctggcgcc ggagatcgtc ggcgaggagc actacgccgt cgcgcgcggc
     3961 gtgcagaagg tgctgcagcg attcaaggat ctgcaggaca tcatcgcgat tctcggcatc
     4021 gacgagctct cacccgagga caagcagacc gtctttcgcg cgaggaagat ccagcgcttc
     4081 ctcagccagc cgttcagcgt cgcccaggtg ttcacggggc gcgacggccg gcaggtgccg
     4141 gtggccgaaa ccgtgcgcgg cttcagggag attctcgacg ggaagcatga cgcggtgccg
     4201 gaggacaact tctacatgaa gggcggcatc gacgacgtga tcgccgcgca ggcgtgacgt
     4261 ggccgccacg ctgacgctcg aaatcgtgac gccgtccgcc gtcgcctact ccagggacgt
     4321 ggagatggtg acgctgcccg ccgtcgacgg gcagattggc gtctacccgc agcacgttcc
     4381 gctgatgacg cgcatcgtgc ccggcgagat cgtcgtgcgc agggacggcc gcgacgagta
     4441 cctcgccg
//
LOCUS       DATILV010000138         1974 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2841723, whole genome shotgun sequence.
ACCESSION   DATILV010000138 DATILV010000000
VERSION     DATILV010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1974)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1974)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1974
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2841723"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..598)
                     /locus_tag="VLJ17_03155"
     CDS             complement(<1..598)
                     /locus_tag="VLJ17_03155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV22006.1"
                     /translation="MAQNDLPTTTDIPARLDRLPWGRFHTLVVVALGITWILDGLEVT
                     LAGSLAGALKESPSLRFSNTDIGLASSAYLAGAVLGAIFFGWLTDRLGRKKLFFLTLA
                     VYLTATAATAFSWSIASFAFFRFLTGAGIGGEYSAINSTIQELVPARVRGWTDLVING
                     SFWIGAAVGALGSLVLLDPRVINPDFGWRLGFLIGAGLA"
     gene            848..>1974
                     /locus_tag="VLJ17_03160"
     CDS             848..>1974
                     /locus_tag="VLJ17_03160"
                     /inference="COORDINATES: protein motif:HMM:NF014763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HSV22007.1"
                     /translation="MIKLATIWQPLVRHRSVLLGALLIGAVWISLSFFLANERNSAER
                     AEVQNSTNLAGALASHLSNSLGEVDRTLSVIATLYAQRPENFDLLGSLKSNRSLSDAI
                     SRVSIVDRNGIVRLSSDASPRGTNVKDRAYFKSQAEAAADGLFVGKPILSQTPGKWTL
                     ELSRRIKRADGQFDGVVAASLDSGYLTQIYNSVNIGEKGYIRVIGLDGIVRATSGDTM
                     YVLGKDFSRADLFTNLSSAPGGWYYTGSGLSDSVQRLIAYRVANDYPFVVTVGAAVPE
                     IFARVEAKRRTGYFIAGLLTLLIACVTTLSIRGQMQREAAKKRLEHTNMLLSATLANM
                     PQGICMFGADGKLVLANDLYSTMYGLDPVAAKPGMTLTEIL"
BASE COUNT          456 a          531 c          569 g          418 t
ORIGIN      
        1 aggccagacc ggcgccgatc aggaatccga gtcgccagcc gaaatccggg ttgatcaccc
       61 gcggatcaag caaaaccagg gaaccaagag cgccaacggc tgcaccaatc cagaagctcc
      121 cgttgatgac gaggtcggtc catccgcgca cgcgtgcggg aacgagctcc tgaatggtgg
      181 agttgattgc ggagtattcg ccgccaattc cggcgccggt caggaatcga aaaaacgcga
      241 agctcgcaat gctccaggag aatgctgttg cggcagttgc cgtcaggtac acggcaagcg
      301 tcagaaaaaa cagcttcttg cggcccagcc gatcagtcaa ccagccgaaa aaaattgcac
      361 caagcaccgc tccggcgaga taggcgctgc tcgcaagtcc gatatcggta ttcgaaaaac
      421 gaagcgacgg gctttctttc agcgcaccgg ccaggctgcc tgcaagcgtc acttcaaggc
      481 catcgaggat ccatgtgatg ccgagggcga caacgacaag agtatgaaaa cgtccccacg
      541 gcaaccggtc gagtcgcgcc gggatgtcag ttgtcgtcgg aaggtcgttc tgtgccatgg
      601 cgcggatgac ctatctggca cgcggaatag ttgccgcggg tggccttgaa tgcctgcgat
      661 ggccggatct acgtaacgca aaataaagct taacgatccc cggaagcgtt tttggtgctg
      721 ttttcgggcg tgcacagtat cgtccgaagg gaccaaaaga tgcgtcatat aacggaatat
      781 caatggcttt ccgctaattt ttctcgatgt ttgcagtgtg gcctcgaggg ttggcggcac
      841 ctcgcagatg atcaaactcg ccacgatatg gcagcctctc gtcaggcatc gatcggtgct
      901 gcttggagcg ctgttgatcg gcgctgtctg gatttcgctg tcgttttttc ttgccaacga
      961 acgcaatagc gccgaacgcg cagaggttca gaattcaaca aacctcgccg gggctttggc
     1021 aagccacctt tccaattcgt tgggtgaagt cgaccgtacg ctgagcgtca tcgccaccct
     1081 ttacgctcaa cggcctgaga atttcgatct gctgggctca ctcaagagca accggtcttt
     1141 gtcggatgca atatcgcgag ttagcatcgt cgatcgcaat ggaattgtgc ggctcagcag
     1201 cgatgcaagc ccgcgcggca caaatgtgaa agaccgcgca tacttcaaga gtcaagccga
     1261 agctgcggcc gacggacttt tcgtcggcaa gccaatcttg tcacagacgc ccggcaagtg
     1321 gacgcttgaa ctctcccggc ggatcaaacg tgcggatggt cagttcgatg gagttgtcgc
     1381 tgcctccctt gattcaggat atctgaccca aatctataat tcggtgaaca tcggcgagaa
     1441 gggatatata cgcgtcatcg gtctcgacgg aattgtccgc gccacgagcg gcgacacgat
     1501 gtacgtattg gggaaggatt tttctcgagc cgatctgttt acgaatttat cgtcggcacc
     1561 aggaggatgg tattataccg gaagcggttt gagcgacagc gttcaacggc ttatcgccta
     1621 tagagtcgcc aacgactatc cttttgtcgt cactgtcgga gctgctgttc cggaaatctt
     1681 tgcacgcgtg gaggccaaaa gaaggaccgg ctatttcatt gcgggattgc tgactcttct
     1741 gatcgcgtgc gtcacgacgc ttagcatcag ggggcaaatg caacgcgagg cggcaaagaa
     1801 gcgcctcgaa cataccaaca tgcttctgag cgcgacgctt gcgaacatgc cgcagggcat
     1861 ttgtatgttt ggggccgatg ggaaacttgt gctggcaaac gatctttaca gcacgatgta
     1921 tggccttgat cccgttgccg caaaaccagg gatgacgctt acggagatcc tgca
//
LOCUS       DATILV010000139         1961 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_31351, whole genome shotgun sequence.
ACCESSION   DATILV010000139 DATILV010000000
VERSION     DATILV010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1961)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1961)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1961
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31351"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..243
                     /locus_tag="VLJ17_03165"
     CDS             <1..243
                     /locus_tag="VLJ17_03165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015950340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate ABC transporter"
                     /protein_id="HSV22008.1"
                     /translation="QDTIMALGTELEQFGTKEAMADDQKVAEVYAKKGAKVSDLDEAT
                     VDKWRAIARDTAWKDYAQKTALSAELLKLAEQVHVS"
     gene            442..990
                     /locus_tag="VLJ17_03170"
     CDS             442..990
                     /locus_tag="VLJ17_03170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HSV22009.1"
                     /translation="MVHTLDAIETSPAPAIVAGGPVERALALVNHVIVVLSSIALVVA
                     SFVLTYSVASRYFLHFSTDWQDELSVFLIVGAVFMSSASIQARRGHVAIEAIVGLLPP
                     GVNHARQIVVDGASFVFCAFFAWKSWLLLHEAWTENFHSESTWAPPLWIPYSLMSVGM
                     TLLALQLLMQIVLALAPARRPE"
     gene            987..>1961
                     /locus_tag="VLJ17_03175"
     CDS             987..>1961
                     /locus_tag="VLJ17_03175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HSV22010.1"
                     /translation="MTTATIGLLYGTATLLVMFAGMPIAFALGAVATVFMIVFMPASS
                     VDTITQNVYEEMASITLLSIPLFILKGSAIGRSRAGQDLYGALHAWMHRIPGGLGIAN
                     VFACALFAAMAGSSPATCSAIGSAGIPEMRKRGYSGGFAAGIIAAGGTLGILLPPSIT
                     MILYAVAAEQSLGRLFLAAIGPALLLVVLFAGYTGWHFRVEYRAALAAQKRTDVRSEL
                     LRPDDLTLRDRFALLPRVLPFVILLTGVMIALYGGFATPSETAGLGAVLALSLIASIY
                     GVWRASELAPILTATLRESTMLMFIIGMSLLYSYVMSYLHISQSTAEWI"
BASE COUNT          309 a          612 c          589 g          451 t
ORIGIN      
        1 caagatacca tcatggcgct cggcaccgag ctcgaacaat tcggcaccaa ggaggctatg
       61 gctgacgacc aaaaggttgc cgaggtctat gccaagaagg gcgccaaggt gtcggacctc
      121 gacgaggcga ccgtcgacaa atggcgggcc atcgcgcgcg acactgcgtg gaaggattac
      181 gctcagaaga ccgccctatc tgccgagttg ctcaagctcg ccgaacaggt gcatgtgtcc
      241 taagctgcgc aatgaatgca cctttcaagg gggcgtcgcc atccgcgcac tcgcacaggg
      301 gaattgagtg aaccgggcag cattttctcc cttgccgatt gcgggggagg gtcggggtgg
      361 gtggtgccgt gcggcaacgc tgtgccacat ctcccgaccc ccgactcctc ccaaggggga
      421 gaggagcatc gggggcgttt gatggttcac acgctcgacg cgattgaaac ctcgcccgcg
      481 cctgccatag tcgcgggcgg accggttgag cgtgcacttg ccttggtcaa tcacgtgatc
      541 gtggtgttgt cgtcgatcgc cctcgtcgtc gcctcgttcg tgctcaccta cagcgtcgcc
      601 agccgctatt tcctgcactt ctcgactgac tggcaggacg aattgtcggt gtttctcatc
      661 gtcggggcgg tgttcatgtc gtcggcttcg atccaggcac ggcgcgggca tgtggccatc
      721 gaggcgattg tgggcctgtt gccgccaggt gtgaaccatg ctcgacagat cgtggtagat
      781 ggtgcgagct tcgtcttctg cgcgttcttt gcctggaaat cctggttgct gctgcatgag
      841 gcgtggaccg agaactttca ttcagagtcc acttgggcgc cgccactgtg gatcccgtat
      901 tcgctcatgt cggtcggtat gactctcctg gccttgcaat tgctgatgca gattgttctc
      961 gcactggcgc cggcaaggcg gcccgaatga cgaccgccac gatagggctc ctctacggca
     1021 cggccacact tctcgtcatg ttcgccggca tgcccatcgc cttcgcgctc ggcgcggtcg
     1081 ccactgtatt catgatcgta ttcatgccgg cgtcctcggt cgataccatc acgcaaaacg
     1141 tctatgagga gatggcgtcc atcaccttgc tgtcgatccc gctcttcatc ctcaagggct
     1201 cagcgatcgg ccgttcccgc gctggtcaag acctctatgg cgcgctccat gcctggatgc
     1261 atcgcatccc cggtgggctc ggcatcgcca atgtgttcgc ttgcgcactg ttcgccgcca
     1321 tggccgggtc gtcgccagcg acctgttcgg cgattggttc ggccggtatc ccggaaatgc
     1381 gcaagcgcgg ttattcgggc ggcttcgcgg ccggaatcat tgctgccggt ggcacgttgg
     1441 gtatcttgct gccgccctcc atcaccatga tcctttatgc ggttgcggcc gagcaatcgc
     1501 tcggccgcct gttcctcgcc gccatcggcc cggccttgtt gctggtcgtc ttgtttgccg
     1561 gttatacggg ctggcatttc cgggtcgaat atagggcggc cttagcagct caaaagcgca
     1621 ccgacgtcag gtccgaattg cttcgccctg acgatctcac cttgcgcgac cgcttcgcgc
     1681 tgctgccacg tgttctaccg tttgtgattc tcctcaccgg cgtgatgatc gcgctctatg
     1741 gcggcttcgc gaccccgtcg gagacggccg gccttggcgc ggttcttgct ctctctctga
     1801 tcgcatctat ctacggcgtg tggagggcca gcgagcttgc ccccatcctc acggccacgc
     1861 tgcgcgaatc caccatgctg atgttcatca tcggcatgtc gctgctttat tcctatgtca
     1921 tgagctatct gcatataagt cagtcgacgg cggaatggat c
//
LOCUS       DATILV010000140         8869 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_542878, whole genome shotgun sequence.
ACCESSION   DATILV010000140 DATILV010000000
VERSION     DATILV010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8869)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8869)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8869
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_542878"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1813
                     /locus_tag="VLJ17_03180"
     CDS             <1..1813
                     /locus_tag="VLJ17_03180"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008961314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HSV22011.1"
                     /translation="KTVLDPPEADSHLVLLDVNATDAASAMAAGWANYRPDANRPLRI
                     ATPQAPYNGWEERHVYSYETSPNEKAVVYGLAWRAGGAWTVVIVEATRSTFEKRNAAF
                     SLTIGSLRPRGYQREMFAGRKAHLLDADRIALLKEFVQNVMRDFGIPGVGLSLVDGGK
                     VVFQGGLGVKTLGKPDPVDADTLFLAASNTKAMTTLLLAELVDERKLRWDEPVTEAYP
                     DFRLGDADTTRQVLVKHLVCACTGLPRQDFEWLFNFGAATPASSLASLGTMQPTSRFG
                     EIFQYSNLMVTAAGYVGASVASPKQELGAAYDEVMRSKVFGPLGMTHTTFDFAMALSG
                     NFASPHDDDVDGKTTPARMDMNYSVVPIRPAGGMWTSARDLSKYVEMELALGQLSDGK
                     QLVSKESLLERRKGQVQSGEDTTYGMGLVVSMQYGIPVVSHGGSLFGYKSDMIFLPDQ
                     GVGAVILTNSDTGGYLTGPFRRRFLEVLFDGKPEAIEQAKAANAQRIAARDKNRERLM
                     VPADRGEVRKLASGYSSPALGAFRVRIEDGATIFDFGKWRSSVASRKNDDGTMSFISI
                     DPTVDGFNFVVSERDGKRALIIRDAQHEYAFVESPFP"
     gene            1996..3561
                     /locus_tag="VLJ17_03185"
     CDS             1996..3561
                     /locus_tag="VLJ17_03185"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HSV22012.1"
                     /translation="MTSISANAGLLPERVEKAAQERIAAGIYQTLVFGVVDGDKSEVV
                     VFGELDDGKAPDGDTVYELASATKTFTGTLLAHAVLSGRVTLDTPVAKLLPDFKIPSR
                     GGQEITLEHLATHHAGLPREGLGDYRAAKLKAYLAAYQLPRDPGAAYEYSNGGFALLG
                     YALAQLEHTTYDALTDKEILKPLNMAVSGAVVTEAMHTRLAPGHDHTGKAASQDADAL
                     VGAGAIRSTANDMLRYLKANMGIDPSPLAAAMKLAQQPRRDMGNAMRVGLAWITTAKG
                     IVWHNGMNAGHRSFLGFTVDGRRGVVILGNTAVDADDLGFATLDADAPLAPAYKAIVL
                     PAASLDDYVGTYKLADKFLLNVFRMNGGLFARATGQGAIPIFPSAPNEFFAKVVQASI
                     SFTRDPNGVVNGLVLHQNGDRAAPKLSASELPPELKEIALDAAALGDYVGTYRFDFGA
                     IFDVTFKSDHLEAQLTGQAAFPIFASATDKFFYKIVDAQLDFERETGGKVVAVVLHQN
                     GRDMRAPRMATQR"
     gene            4091..5866
                     /locus_tag="VLJ17_03190"
     CDS             4091..5866
                     /locus_tag="VLJ17_03190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22013.1"
                     /translation="MANAQRISKLIVGAIISAAIHVDALAEKALRKAWLSYALILLIQ
                     SKVIWRIWDIKDITSGDTSSYFGTAKKWADGFLVDIVWSPLYTAFYGSLLFVTADTYN
                     VTIMHRVVIVLAAAVGVLFVMRQLLPPNLALLGAAWWAILPINYNTLYEVHLFAVLPI
                     LLVWALVLGKDAAWARGAGLATLATCAVLVRNEFLVAAIAMLLLSTFYEWRCSRKEAH
                     CAVAYGIPLVSGVTLCGLAYWRSFIKLPEIWPHLEMKHTLNMCQVYAFGYQQRHPEWT
                     ASPWTECQTLANSTFGVDYPSIGHMLWSNPMAMFAHFWWNLRLVPNGLEVLLFNARAG
                     SFEPDYPPTRLATYPLILGVLVIVSLAAGVILAWRARSKAPLFWICNRTAIAFLPLLT
                     MAVPVVLTQRPRPSYFFYVSIIIIAATMNAIRLILRRWPGIRRILNIGALAAASALIL
                     LMPRYSLPPYLPSGRPILQKLEHLAPHRTVLLKAQGRIILGNWASDILNYLDLNLSAG
                     NPFEGSQVVFGNDLLRRWEGTTPLEEFLAEQRVHVLYLDASELAWLRTQQQAKPMLDN
                     PRGTGWLDLAHEDRGAGSWALLTKM"
     gene            complement(6184..6408)
                     /locus_tag="VLJ17_03195"
     CDS             complement(6184..6408)
                     /locus_tag="VLJ17_03195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014498628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22014.1"
                     /translation="MTARALMACRSRDGSVAITVAVLEECLDRAALLIAESGNKGVVY
                     LPIYDRLEVELETLKAREDRMAHIRARIRR"
     gene            complement(6829..>8869)
                     /locus_tag="VLJ17_03200"
     CDS             complement(6829..>8869)
                     /locus_tag="VLJ17_03200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_021312368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSV22015.1"
                     /translation="VPVSVVGTFAVLYLLGFSINTLSLFGLVLAIGIVVDDAIVVVEN
                     VERNIEEGRSPLEAAHQAMTEVSGPIVAIALVLCAVFVPMAFLTGVTGTFYKQFAVTI
                     AISTVISAINSLTLSPALAAKLLRSHDAPKDMLSRLIERLLGWFFRPFNRFFKASSDS
                     YQGAVSRALGRRGVVFMVYVVLLAGTGLMFNAVPRGFIPTQDKLYLIAGVKLPEGSSL
                     ERTDAVLQRMKDVALGVDGVAHVIGLTGFNPTQQTNTPNYAVAFPILKPFNERHRSAK
                     EIAADIQAKIAEIKEGFAFVLNPPPVLGLGQGAGYSLFVEDRAGAGYGALQQAANALQ
                     TAAVKTPGMGFPFVGYQSNVPQLDIQVDRVKAKAQGVALTNLFETLQVYLGSSYVNDF
                     NLFGRTWRVYAQADGDFRRRVEDIANLKTRNDKGEMVPIGSMVKIGQTYGPDPVLRYN
                     GYPAADFIGEANPAMLSSAQAMGTMAELARRVLPNGMTIEWTDLSFQEATQGNAALLV
                     FPVSVLLAFLVLAALYESWVLPLAVILIVPMCMLSALAGVKLYGSDNNTFVQVGLVVL
                     MGLACKNAILIVEFARELEFQGKSIVEAALEACRLRLRPIVMTSVAFIAGTIPLVLSH
                     GAGAEVRSATGVTVFAGMIGVTLFGLFLTPVFYVGLRKLSGRKRIQRGEVSHSHG"
BASE COUNT         1787 a         2644 c         2680 g         1758 t
ORIGIN      
        1 caagactgtc cttgatccgc cggaggcgga ctcgcatctg gtactgctcg atgtgaacgc
       61 cacggatgcc gcctccgcga tggcggccgg ttgggctaac taccgtcccg acgccaaccg
      121 accgctcagg attgcgacac cacaggcgcc gtacaatggc tgggaggagc ggcatgtcta
      181 ctcttacgag acctcgccca acgaaaaggc cgtggtctat gggttggcgt ggcgtgcggg
      241 cggggcttgg acggttgtca tcgtcgaagc gacccggtcg actttcgaaa aacgcaacgc
      301 cgccttctcg ttgacgatag ggagcttgcg cccgagggga tatcagcgcg agatgttcgc
      361 cgggaggaaa gcccatctgt tggacgctga ccgcatcgct ctgctcaagg agtttgtcca
      421 gaatgtcatg cgggacttcg ggattcccgg cgtgggcctg agcctcgtcg atggcggcaa
      481 ggttgtgttt caggggggcc tcggggtgaa gactcttggc aagccggatc cggtcgatgc
      541 cgatacgctc ttcctggccg cctccaacac caaagcgatg acgacgctgc tcctcgccga
      601 gttggtcgac gagcgcaaat tgcggtggga tgagcccgtt actgaggcct atcctgactt
      661 ccgattgggc gatgccgata ccacgcggca ggtgttggtg aagcacctgg tatgcgcctg
      721 caccggactt ccccgccagg attttgaatg gctgttcaat ttcggagcgg caacgccggc
      781 gtcatcgctt gcgtctctcg gcaccatgca gccgaccagc cgctttggag agatctttca
      841 gtacagcaat ctgatggtga ctgccgcagg ctatgttggg gcatctgtgg ctagccctaa
      901 gcaggaactc ggcgccgcct atgacgaggt tatgcgatcg aaagtgttcg ggccgctcgg
      961 aatgacgcac accaccttcg attttgcgat ggcgctgagc ggcaattttg caagccccca
     1021 cgacgacgac gtggatggca agaccacacc agcacggatg gatatgaact actcggtagt
     1081 acccattcgc ccggctgggg ggatgtggac cagtgctcgc gatctatcga aatacgtaga
     1141 gatggaactt gcgctcggtc agttgtccga tggaaagcaa ttggtctcca aagagagcct
     1201 gctcgagcga cgcaaggggc aagttcaatc tggtgaggac acgacctatg gaatggggct
     1261 cgtggtcagc atgcaatatg gtattccggt cgtaagtcat gggggcagcc tgttcggata
     1321 caagagcgac atgatattcc ttccggacca gggcgtcggc gcggtgatcc tgacgaactc
     1381 ggacactggc ggctacctca ccggcccttt tcggcgccgc ttcctcgagg tgctgttcga
     1441 cggcaaaccc gaagcgatcg agcaagcaaa ggccgcgaat gcgcagagga tcgcggccag
     1501 agacaagaac cgcgagcggc tgatggtacc agcggatcgg ggggaggtcc gcaagttggc
     1561 cagtggctat tcttccccgg cgcttggcgc gttccgcgtc cgcatcgagg atggcgcaac
     1621 aattttcgat tttggcaaat ggcgcagctc ggtcgcctcg cgcaagaacg atgacgggac
     1681 catgtccttc atctcgatcg atcccacggt cgatggtttc aatttcgtag tcagcgagcg
     1741 ggatgggaaa agagcgctga tcatccgcga tgcccagcac gagtacgcct ttgtcgagtc
     1801 gccatttcca taatccccgc catgtgaggg atgaaatgcc cgccggggcg gccccaatcg
     1861 aacgagagca ccagaggagc tgcacgtccc gggccatcat ggccgatcta ccattgcgcc
     1921 cgaactaagc gggagggagc tgtgctttca tcgctgaatc gccgtatcgc agcatggtct
     1981 cttgggatgt gcttcatgac gagcatctcg gcaaacgccg gactgttgcc cgagcgcgtg
     2041 gagaaggccg cgcaggaacg catagcggcg ggcatctacc agacgctggt cttcggcgtg
     2101 gtggacggcg acaagagcga ggtcgtggtc ttcggcgagc tcgatgacgg caaggcaccc
     2161 gatggcgaca cggtttatga acttgcatcg gcaacgaaga ccttcaccgg caccctcttg
     2221 gcccatgctg tgctctctgg gcgcgtgacg ctcgacacgc cggtggcaaa gcttctgccc
     2281 gacttcaaaa tcccatcacg cggcggccag gagattacac tcgagcatct cgccacgcat
     2341 cacgccggtc tgccgcggga ggggttgggc gactacaggg cggcgaagct gaaggcttat
     2401 cttgcggcat accaactgcc gcgcgatccg ggcgctgctt acgaatactc caatgggggc
     2461 tttgctctcc tgggttatgc gctggcgcaa ctggagcaca caacctatga cgccctgacc
     2521 gacaaggaga ttctcaagcc gctgaacatg gcggtgagcg gcgcggtggt cacggaagcc
     2581 atgcataccc gtctcgcacc cggtcacgac cacacgggta aggcggccag ccaggacgcc
     2641 gacgcactgg tgggcgccgg cgccatccgt tccaccgcca acgatatgct gcgctatctg
     2701 aaagccaaca tgggcatcga tccatcgcca ttggcggctg cgatgaaact cgcccagcag
     2761 ccgcgccgtg atatgggcaa cgccatgcgc gtcgggctgg cctggatcac aaccgctaaa
     2821 ggaatcgtat ggcacaacgg tatgaacgcg ggccacagaa gctttctcgg tttcaccgtc
     2881 gatgggcgcc ggggcgtcgt catcctcggc aacacagccg tggacgccga cgatctgggt
     2941 tttgccacgc tcgatgcgga cgcgccgctg gcgcccgcat ataaggcgat cgtcttgccc
     3001 gctgcgtcgc tcgacgacta cgttggaact tacaagcttg ccgacaaatt cctgctcaat
     3061 gtgtttcgca tgaacggcgg gcttttcgcc cgggccactg ggcaaggtgc gatccccatt
     3121 ttcccgtctg cgcccaacga gtttttcgcc aaggttgtcc aagccagcat cagcttcaca
     3181 cgcgatccca atggcgtcgt gaacggactt gtcctgcacc agaacggcga ccgtgcggct
     3241 ccgaaactga gcgcatccga gcttccgccc gaactcaaag aaatcgcgct cgacgccgcc
     3301 gcgctcggcg attacgtcgg cacataccgg ttcgatttcg gtgcgatatt cgatgtcacg
     3361 ttcaagagcg atcatctcga agcgcagctg accgggcagg ccgcattccc gatcttcgcc
     3421 agcgccacgg acaagttctt ttataagatt gtcgacgccc aactcgactt cgaacgtgag
     3481 acgggcggaa aggtcgttgc ggtggtgctg caccaaaacg gacgtgatat gcgggcgccc
     3541 cgcatggcga ctcagcgatg acatcggttt gatgaagcac gccgcacaac cggcgcgctt
     3601 cgacccgatc gtcaaccagt acaatcagtt gggcgagctg tttcgaattg aaggtcgttg
     3661 ccagccggga tgcacgctgt ttctttggca tcaagaacgt ctgcggcgag cgcggggcga
     3721 aatttccggg gccactcctc ttgccaaaaa cgcgcgcgtc tgcctccacc gcttccgcgt
     3781 tagctcttca gtgtgagact cgccttgcag gaaccaccga caggttcggc gccatctcct
     3841 ctccggcata cccgtcccaa atcgatcggg ccgcccgccg ccgtcccaaa aaaagtcagc
     3901 ggtatgagaa atccagcatc taggagccgt caaagcagct gtgggatcgc cgacgcgccc
     3961 caggttcaat agccacctag gcccatcatt ctctcccggg caggcgtcca tattcaccca
     4021 tattcatgtg actgattatt tgtggcagaa cgcgcctgcg ggtggccaca aaagcaaaac
     4081 ggggggggac atggctaacg cccaacggat cagcaagttg atcgtaggcg ctattatttc
     4141 cgcagcgatc cacgttgatg ctctcgctga gaaggcgctc aggaaggcat ggctgagcta
     4201 tgcgttgatc ttattaatac agagcaaagt catctggcgc atttgggaca tcaaagatat
     4261 tacctccggc gataccagca gctattttgg gaccgcaaag aaatgggctg atggatttct
     4321 cgtagatatc gtctggtcgc cgctctacac agcattttac ggctccttgc tgttcgtgac
     4381 tgccgacaca tataacgtga cgatcatgca tcgcgtggtt atcgtgctgg ctgcggctgt
     4441 cggcgtgctg ttcgtgatgc gccagctttt gccgccgaac ctagcgctcc tgggggcagc
     4501 gtggtgggcc attctgccaa tcaactacaa tacgctgtac gaggtccacc ttttcgctgt
     4561 cctgccaata ctgttggtgt gggcgttggt actgggtaag gacgcagcat gggcacgcgg
     4621 cgcagggttg gcaaccttgg cgacgtgcgc ggtcctggtg cgtaatgaat ttctcgtcgc
     4681 tgccatcgcc atgcttttgc taagtacttt ttatgaatgg cgttgttcgc ggaaagaagc
     4741 gcattgtgct gttgcctacg gaattccact tgtatccggg gtcacattat gtggtctggc
     4801 gtactggaga tcattcataa agcttccgga aatttggcca catcttgaaa tgaagcacac
     4861 gctcaacatg tgccaagtct acgccttcgg atatcaacag cgccaccccg aatggactgc
     4921 aagcccgtgg accgaatgcc agacgctcgc aaactcgacc ttcggcgtcg attatccgtc
     4981 gatcggccac atgctctggt cgaatcccat ggcgatgttc gcgcactttt ggtggaatct
     5041 gcgtttggtc ccgaatggct tggaggtgct gctgttcaat gcgagggccg ggagctttga
     5101 gccggattat ccgccgactc gtctggcgac ctatccgctt atcctaggcg tgctggtcat
     5161 cgtgtccctc gccgcgggag taatacttgc gtggcgtgcg cggtcgaaag cgcctttgtt
     5221 ctggatatgc aatcggacgg caatcgcttt tctgcccctg ttgacgatgg ccgttcccgt
     5281 ggtgttgacg caacgccctc ggccttccta ttttttttac gtttccatta tcatcatagc
     5341 tgcaaccatg aacgcgatac gcttaatcct tcggcgctgg ccgggaatcc gtcgaatcct
     5401 gaatattggc gcgctagcgg ctgcaagtgc gctgatcctg ttaatgccgc gctatagcct
     5461 gcctccatat ctgccgagcg gccgcccgat tctgcaaaaa cttgaacatc tggcacctca
     5521 tcgaacggtg ctgcttaaag cccagggccg catcattctc ggtaattggg cctccgacat
     5581 cctgaattac ttggatctga acctgtccgc cggaaatccc ttcgaagggt cgcaagtcgt
     5641 tttcgggaac gacctgttgc ggagatggga aggaacgact ccgcttgagg agtttctggc
     5701 cgaacagcgg gtccatgttc tttatcttga tgctagcgag ttggcgtggc tgcgcacgca
     5761 acagcaagcc aaacccatgc tcgacaaccc gcgcggcacg ggctggctcg atctcgcgca
     5821 cgaggaccga ggcgccggga gctgggcctt gctgactaaa atgtagaggc tagtgccttt
     5881 gattggaagg gcctcgccgc catgaacaaa tttccgaacg gcttcccccg ctacaagaac
     5941 aaagaagcga gcatgtctgg cgctctcagt tctttcgtga gaacaagctg tttccgaccc
     6001 cgagtcacaa aatctattcg ttcaggcaca cgttcgaaga ccggctgaag gaagcgggtg
     6061 ttgacgatga actgcggcgc ctgttgatgg ggcatgcaat cgatcgtccc aaataccgct
     6121 ccggtgggtc actggaatgg cggcagactg aactgcgaaa aatcgaattg gcctttgagc
     6181 cgtctatcgt ctaatccgtg ctcggatgtg cgccatgcga tcctcccttg ccttgagcgt
     6241 ctccaattcc acctccaacc gatcgtagat aggtaggtac acgacgcctt tgttcccgct
     6301 ctccgcgatc aacaacgctg cgcgatcaag gcactcctcc aaaactgcga cggtgatggc
     6361 tactgacccg tcgcgcgagc gacacgccat caacgcgcgg gcagtcatgc acgtgcctct
     6421 tcgagtcact gcgattgatt ttgcttagcg aatgcgggtc gaacggcaat agaaaggcgc
     6481 ggaccgttag gatcgtggaa ttggatgcga tggagtgcaa atagcgatgt tcgcgatgcc
     6541 tcgcggtcgc gggagaaaga ggagaccgac actctgttgc tgtgcgttcg aatcgcatgc
     6601 cgcgtccacg gaaccggtat ccactcagcc attcacatcc gatctgcgtg tcgggggggc
     6661 aaatcactgg agcgctaccg tcaatatcgc gctgcgactg tcttcatttg ctaagcatcc
     6721 gacccgcaag aacattcgcc ggcaccattt cgcttggggg gcgaatcaaa cgacggcacg
     6781 ggccggagcg accgcgatat tcgcggccgc ccaggcgcct gtcgggcttc acccgtgcga
     6841 gtgactgacc tcgccgcgct ggatccgttt gcgcccggac agcttgcgca ggccgacata
     6901 gaacaccggc gtcaggaaca ggccgaacag ggtgaccccg atcatgccgg cgaacacggt
     6961 gacccctgtc gccgagcgca cctcggcgcc ggcgccgtgc gagagcacca gcgggatcgt
     7021 gccggcgatg aaggccaccg aagtcatcac gatgggccgc agccgcagcc ggcaggcttc
     7081 cagcgcggcc tcgacaatgc tcttgccctg gaattcgagt tcgcgcgcaa actccacgat
     7141 caggatcgcg ttcttgcaag cgaggcccat cagcacgacg agcccgacct ggacgaaggt
     7201 gttgttgtcg ctgccataca gcttcacacc ggccagcgcc gagagcatgc acatcggaac
     7261 gatcaggatc accgcgagcg gcaacaccca gctctcatag agcgccgcta gcaccaggaa
     7321 ggcaagcaga accgagacgg gaaacaccag tagggccgcg ttgccctggg tggcttcctg
     7381 gaagctaagg tcggtccatt cgatggtcat gccgttgggc aacacccgcc tggcgagctc
     7441 ggccatcgtg cccatcgcct gcgccgagga cagcatggcc ggattcgcct cgccgatgaa
     7501 atcggccgcg ggatagccgt tatagcgcaa caccggatcg ggaccgtagg tctggccgat
     7561 cttcaccatc gagccgatcg ggaccatctc gcccttgtcg ttgcgcgtct tcaggttggc
     7621 gatgtcctcc acccgcctgc ggaagtcgcc atcggcctgc gcatagacgc gccaggtgcg
     7681 gccgaacagg ttgaagtcgt tgacatagga cgagccgaga tagacctgga gtgtctcgaa
     7741 caggttggtc aacgctacgc cctgcgcctt ggccttgacg cgatcgacct ggatatcaag
     7801 ttgcggcacg ttggactggt agccgacgaa gggaaagccc atgcctggcg tcttcaccgc
     7861 cgcggtttgc agcgcgttgg ccgcttgctg gagtgcgcca tagccggcgc ccgcgcggtc
     7921 ttcgacgaac agcgaatagc ctgcgccttg gccgagaccg aggaccggcg gcgggttcag
     7981 cacgaaggca aagccttcct tgatctccgc gatcttggcc tggatgtcgg cggcgatttc
     8041 cttggcgctg cggtggcgct cgttgaacgg ttttaggatt ggaaaggcaa cggcataatt
     8101 cggcgtattg gtctgctgtg tggggttgaa accagtcagc ccgatcacgt gggcgacacc
     8161 gtccacgccg agcgcaacgt ccttcatccg ttgcagcacc gcatcggtgc gttccagcga
     8221 ggatccctcg ggcagcttca cgccggcgat cagatagagc ttgtcctggg tcggaatgaa
     8281 gccacgcggc accgcgttga acatcagccc ggtgccggcc agcagcacga cataaaccat
     8341 gaataccaca ccgcgtcgcc cgagcgcgcg cgaaacggcg ccctgatagc tgtccgaact
     8401 cgccttgaag aagcgattga acggccggaa gaaccagccg agcaggcgtt cgatcaggcg
     8461 cgaaagcata tccttcgggg cgtcgtgcga acgcagcaat ttggcggcga gcgccggcga
     8521 caaggtcagc gaattgatcg ccgagatcac ggtcgagatc gcgatcgtca ctgcgaactg
     8581 cttgtagaag gtgcctgtga cgccggtcag gaacgccatc ggaacgaaca ccgcgcacag
     8641 cacgagcgcg atcgcgacga tcggcccgga tacttcggtc atcgcctggt gcgcggcctc
     8701 aagcggcgag cggccttcct caatgttacg ctcgacattc tcgaccacga cgatcgcgtc
     8761 atcgacgacg atgccgatcg cgagcaccag gccgaacagc gagagcgtgt taatggaaaa
     8821 gccgagcaga tagagcacgg cgaaggtgcc gacgaccgat accggcacg
//
LOCUS       DATILV010000141         2735 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4887340, whole genome shotgun sequence.
ACCESSION   DATILV010000141 DATILV010000000
VERSION     DATILV010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2735
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4887340"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(131..622)
                     /locus_tag="VLJ17_03205"
     CDS             complement(131..622)
                     /locus_tag="VLJ17_03205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22016.1"
                     /translation="MKTIAVSAIALAIAAVGFSSGAQAQAQQAKKLFFEGDIVRHALP
                     DQAGPFCVLVNQYKRKEAVAFRIRVLQPNGEVADEKVLKSVVVELGNGQRLPAGYKPH
                     GAPPTDHFWSMFWTIPADHPTGSIGYKVIATMNDGSTVEWKPFNRPTTALMVVAGEPD
                     MKK"
     gene            874..2280
                     /locus_tag="VLJ17_03210"
     CDS             874..2280
                     /locus_tag="VLJ17_03210"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Do family serine endopeptidase"
                     /protein_id="HSV22017.1"
                     /translation="MRMFLRLIAYLSLMMSALSAPAFAQEVRVPSSAGEIKLSYAPVV
                     KLVSPAVVNVYAARVVESRMPLFDDPIFRRFFGGGGLGGPREQVQRSLGSGVIVDPSG
                     LVVTNFHVIENADQIKVSLIDKREFEADIVLKDQRSDLAVLRLKDVHERFAAIDLGDS
                     DALQVGDVVLALGNPFGVGQTVTHGIVSAVARTQVGITDYQFFIQTDAAINPGNSGGA
                     LVDLSGRLVGINTAIFSRSGGSQGIGFAIPANMVRGVIASAQGGSAVVRRPWLGAKLQ
                     AVTPEIAESLNLKRPAGALVSSVLARGPAARAGLHTGDLVVSVDGQAVDDVNAFDYRF
                     ATKRLGGEANIGVIRNGREFKLAVALETAPETPREETVIKARSPFFGAKVANLSPLLA
                     EELRLDSETKGVVVTDVEIGSTAQTFGLQKGDIVVAVNNTRIETTQDLVRAVSQPSRI
                     WRLTIRRGGQQISATFSG"
     gene            2277..>2735
                     /locus_tag="VLJ17_03215"
     CDS             2277..>2735
                     /locus_tag="VLJ17_03215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012045021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSV22018.1"
                     /translation="MSPRGKREAGGLFAAAGLDRDAPRPLADKLRPQKLSEVVGQDHL
                     VGPDGVLTRMLETRTLGSLVFWGPPGTGKTTVARLLADATALHFEQISAVFSGVADLK
                     KVFEAARARRETGLGTLLFVDEVHRFNRAQQDSFLPVMEDGTVVLVGATTE"
BASE COUNT          462 a          830 c          891 g          552 t
ORIGIN      
        1 actcctggcc cgagggcggc cgcgggggcc ccggctgccg gcgtttggga catcagcgcc
       61 ggcgatgcta gcgcacacaa ccatccggcc agccagccgc cgccaaacct catgataacc
      121 tcttggaatc ttatttcttc atgtctggtt cgccggccac caccatcaat gccgtggtcg
      181 gacgattgaa cggcttccat tcaaccgtgg agccgtcgtt catggtcgct atgaccttgt
      241 atccgatcga gccggtcgga tggtcagccg gaatggtcca gaacatcgac cagaaatgat
      301 cggtcggcgg ggcgccgtga ggcttatagc cggctggcag ccgctggccg ttgccaagtt
      361 cgaccaccac gctcttgagc accttttcgt ctgccacttc accgttcggc tgcagcacgc
      421 gaatgcggaa cgccacggcc tccttacgct tatattggtt gaccagcaca cagaacgggc
      481 cagcctgatc gggtaatgcg tgacgaacga tatcaccctc gaagaatagc tttttcgctt
      541 gctgagcctg ggcttgagcg ccagagctaa agccgacggc ggcaatggcc aatgcaatag
      601 cggagacagc gattgttttc atttgagggc gccctttcca acctagcaag ttcgttattc
      661 ggatgcattc gcatcaatat tttggtggat catagccgga ttttggtttc gccggaaggg
      721 ggctttgaag gtgagggggc tttgaaggtg aggggccttt gaaaggcccg ttctcgtctg
      781 ccctgaaggg gggcgtgccg ggtgcgtcgc ccttcaaatc cttagccgcg cattctatat
      841 ctcgcccacg cgggtgccgg aatggattcg catatgcgca tgtttctacg tctgattgca
      901 tacctctccc tgatgatgtc ggcgctgtcg gcgccggctt tcgcccagga ggtgcgcgtg
      961 ccatcctccg cgggcgagat caagctgtct tatgcgccgg tcgtgaagct ggtgtcgccc
     1021 gcggtcgtca acgtctatgc ggcccgcgtg gtcgagagtc gcatgccgct gttcgacgac
     1081 ccgattttcc gccgcttctt cggcggcggc ggcctgggcg gtccgcgcga gcaggtccag
     1141 cggtcgctcg gctccggggt gattgtcgat ccctctggcc ttgtggtgac gaacttccac
     1201 gtcattgaaa atgctgacca gattaaggtt tctctcatcg ataagcgcga gttcgaggcc
     1261 gacatcgtgc tcaaggatca gcgctctgat ttagcggtgc tgcgcctcaa ggacgtccat
     1321 gaaaggttcg cggcgattga tctcggcgat tcggacgcgc ttcaagtcgg cgacgtggtg
     1381 ttagcgctcg gcaatccgtt cggcgtcggc cagacagtga cccacggcat cgtgtcggcg
     1441 gtggcgcgca cccaggtcgg cataaccgac tatcagttct tcatccagac ggatgcggcc
     1501 atcaatccgg gtaattccgg cggcgcgctg gtcgatctca gcggccggct ggttggcatc
     1561 aatacggcga tcttctcgcg ctccggcggc tctcagggca tcgggtttgc gatcccggcc
     1621 aacatggtgc gcggcgtgat cgcctccgcc cagggcggca gcgcggtggt gcgaaggcct
     1681 tggctcggtg ccaagctgca agccgtcacc cccgagatcg ccgaaagcct caacctcaag
     1741 cggccggcag gcgccctagt gtcaagcgtt ttggccagag gtccggccgc tcgcgcgggg
     1801 ctgcacaccg gcgatcttgt ggtttcggtg gatggccagg cggtcgacga tgtcaatgct
     1861 tttgactatc gctttgccac caaacggctc ggcggcgagg ccaatatcgg cgtcatacgc
     1921 aacgggcgcg agttcaagct cgcggttgcg ctggaaacgg cgcccgaaac gccgcgcgag
     1981 gagactgtca tcaaggcgcg ctcgccgttc tttggcgcca aggtcgcgaa cctgtcgcct
     2041 ttgctcgccg aggaattgcg attggattcc gagaccaagg gggtcgtggt gacggacgtc
     2101 gaaatcggct cgacggcgca gacctttggg cttcagaaag gcgacatcgt ggtcgcggtc
     2161 aacaacacca ggatcgaaac cacgcaggac ctcgtgcgcg ccgtcagcca gccgagccgg
     2221 atatggcggc tcaccatccg acgcggcggg cagcagattt ccgccacgtt cagtggatga
     2281 gcccccgcgg caagcgcgag gccggagggc tgttcgcggc agccgggctt gatcgtgatg
     2341 cgccgcgccc gctcgctgac aagctgcgac cgcagaaact ttccgaagtg gtgggccagg
     2401 accatttggt cggccctgac ggtgtgctca cgcgcatgct ggagacccgc accctcggat
     2461 cgctggtgtt ttgggggccg ccgggcaccg gcaagaccac ggtggcgcgg ctgctggcgg
     2521 acgcgaccgc gctccatttc gagcagattt ccgcggtgtt ttccggcgtc gccgatctca
     2581 agaaggtttt cgaagcggcg cgggcgcggc gcgagaccgg gctcggaacg ctgctgttcg
     2641 tcgacgaggt gcatcgcttc aaccgggcgc aacaggattc gtttcttccc gtgatggagg
     2701 acggcaccgt ggtgctggtc ggggctacca cggaa
//
LOCUS       DATILV010000142         5050 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3609905, whole genome shotgun sequence.
ACCESSION   DATILV010000142 DATILV010000000
VERSION     DATILV010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5050)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5050)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5050
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3609905"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..918
                     /gene="phnD"
                     /locus_tag="VLJ17_03220"
     CDS             <1..918
                     /gene="phnD"
                     /locus_tag="VLJ17_03220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013419175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0043168 - anion binding [Evidence IEA];
                     GO_function: GO:0043225 - ATPase-coupled inorganic anion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate/phosphite/phosphonate ABC transporter
                     substrate-binding protein"
                     /protein_id="HSV22019.1"
                     /translation="YSTDYAGVIEAMRFNKIQVAWYGNKSGMEAADRAGAEVFAQIVS
                     RDGNIGYYSHVIVHRDSAFTKLDDILKCDKSLDFGIGDPNSTSGFLVPTSYVFAARNI
                     DPKSCFKTVRNANHQANAMAVANRQVNAATNNSEDLQRLAATAPDARERIRVIWTSPL
                     IPLDPLMWRKDLDPAIKGSLYTFLMSYGHIGTDTQIKTAREILANLIWSPFHPSSDNQ
                     LLAIRKLEANRDLLKLKGDAKLSDDEKAKQIGMIRARLAKLDELESKAEADPFRSRVA
                     AFIEAEKAERQDDMKRMIAEFAARYARTN"
     gene            926..1738
                     /gene="phnE"
                     /locus_tag="VLJ17_03225"
     CDS             926..1738
                     /gene="phnE"
                     /locus_tag="VLJ17_03225"
                     /EC_number="7.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013419174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015416 - ABC-type phosphonate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015716 - organic phosphonate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter, permease protein
                     PhnE"
                     /protein_id="HSV22020.1"
                     /translation="MAADVADVTTPPEVPRQPPTRRLLGWLFWFTIVALLAWAWTPAE
                     MYRAVDLIHDWRNMAEFGSAFLRPNFHDWGSYLSDMVVTLQIAVWGTALAVLLGAPFS
                     ILSAANVCPPWMVQPVRRLMDACRAINEIVFALMFVVAVGLGPFAGVMALAVHNLGVF
                     AKLFSEAVESIDPRPVEGIRATGAGRIQEVIFGVVPQVTPLWSSLTLYRLETNVRSAT
                     TLGIVGAGGIGQTLYESIRSFHYAETAAQVIIVVATVMAIDLLSARLRKALV"
     gene            complement(1841..3640)
                     /locus_tag="VLJ17_03230"
     CDS             complement(1841..3640)
                     /locus_tag="VLJ17_03230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008134810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HSV22021.1"
                     /translation="MSSNELNGAQVIVDFLIQQKAPYVFGLCGHGNIQFIDALYERRG
                     DIKTVSVRHESVAGFMADVYYRVCGQPIATFTSCGPGSANLPISLANAFLDSVPFMAV
                     TGNVPTAQFNRGAFQELYRHYQADFPSTVRSYCKKVFQPTRGEMVPLAVRQAWKTMVT
                     GRPGPVVLDVPFDVFLEAAATEAPKPEEWTANISCRCGADPDGVVKAVDMLLSADRPV
                     IIVGQGVRWGGACDELLRLAERLQIPVAASASGLGAIDTHHPLALGLVARGGHYQANH
                     ATRQADVLLALGMRFDDRTSSSWIPGYSFTIPPTKLIHVDIDPEEIGRNYPVALGLMA
                     DVRTFLRQLHAELDRREDLNEFAAERQKWLNAIDGYRKEWDRLVAPGFNDDSQPINPQ
                     RAAFEIDQGLPDDAILISDIGVHHNWLLGYCKPRRPDSLIGSMGFGPMGFGVAGVLGA
                     KFAAPDRPCVSVCGDGAFFMHANVLGTAVEYDLPVVWVVWNNYAYASIRGLQRGYLGG
                     RELATDFHHPKTGERYNPDFAAMARSAGVDGVRVDRAADLAEAVRKAVEANKPYLIDV
                     DIAADINPAGAGVWELPGLGHNKPSIGARYQPS"
     gene            3772..4146
                     /locus_tag="VLJ17_03235"
     CDS             3772..4146
                     /locus_tag="VLJ17_03235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007751922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSV22022.1"
                     /translation="MAIERNWFIRNIAQVPWRQFPDHFGGALSKPLVMPETAGSQHLD
                     YRISTYRPMAYVKMHKHAVQEQVYHVIEGEGLIHIDGEDHVVRKHDFVFLPPGIDHSI
                     TNTGLVDLVFLVVTSPVTDDVS"
     gene            4654..>5050
                     /locus_tag="VLJ17_03240"
     CDS             4654..>5050
                     /locus_tag="VLJ17_03240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008134811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSV22023.1"
                     /translation="MKTQASTKIRPKELATAPRKLPRLREASPTDINQEAEDRQRVGV
                     QSLGRAFAILEEVARHREGIGLADLSKLVGLHNSTTFHLAKTLVSLGYMRQEQDSKRY
                     RVGRPLFVLAANALDEIEMVKLAMPVLEDL"
BASE COUNT         1050 a         1540 c         1484 g          976 t
ORIGIN      
        1 tattcaaccg actacgctgg cgttatcgag gccatgcgct tcaacaagat ccaagtagcg
       61 tggtacggca ataagtccgg catggaggcg gccgaccgtg ccggtgccga agtcttcgcc
      121 cagatcgtct cccgcgacgg caacattggg tactactctc acgtcatcgt ccaccgcgac
      181 agtgcattca ccaaacttga cgacattctc aaatgcgata agtcgctgga cttcggcatc
      241 ggcgacccca attcgacttc gggttttttg gtcccgacct cctatgtatt cgccgcccgc
      301 aatatcgatc cgaaatcctg ctttaagacg gtgcgcaacg ccaaccatca agccaatgct
      361 atggcggtgg cgaaccgcca ggtcaacgcg gcgaccaaca atagcgagga tttgcagcgg
      421 ctcgccgcca ccgcgccaga cgcccgagaa cggatcagag tcatctggac gtcgccgctc
      481 attccgcttg atccgctgat gtggcgcaaa gacctcgatc cagccatcaa gggcagcctc
      541 tacacatttc tgatgagcta cggccacata ggcaccgata cgcagattaa gaccgcccgg
      601 gaaatcctcg ccaatctcat atggtcgcct tttcatccct catccgataa ccagctgctt
      661 gcgatccgca agctcgaagc gaaccgggac ctcctcaagt tgaaaggcga cgccaagctc
      721 tccgacgatg aaaaggcgaa gcagataggc atgatccggg cccggctggc caagctcgat
      781 gaattggaaa gcaaagctga ggccgacccg tttcgcagcc gcgttgcggc attcattgag
      841 gccgagaagg ccgagcgtca ggacgacatg aaacgcatga tcgcggagtt tgcggcgagg
      901 tacgcccgca ccaactgacg ggcgcatggc ggcggatgtg gcagacgtta cgacgccccc
      961 cgaagtgccg cgacagccgc cgacgcggcg gttgctcggc tggctgtttt ggttcacgat
     1021 tgtagccttg ttggcctggg cctggacgcc ggccgaaatg tatcgcgccg tcgatctcat
     1081 ccacgactgg cgcaacatgg cagaattcgg ctcagctttt ctgcggccga acttccacga
     1141 ctggggcagc tatctctccg atatggtggt caccctccag atcgccgtct ggggaacggc
     1201 gcttgcagtg ctgctcggcg cgccgttctc gattctgagc gccgccaatg tatgtccgcc
     1261 ctggatggtg caaccggtgc gccgcttgat ggatgcgtgc cgcgcgatca acgaaattgt
     1321 gttcgcgctg atgttcgtgg tcgcggtcgg cctcggtccg ttcgccggcg tcatggcgct
     1381 ggccgtgcat aatctcggcg tgttcgcaaa gctgttctcg gaggccgtgg agtcgattga
     1441 cccgcggcca gtcgaaggca tcagagcgac gggtgccgga cgcatccagg aggtgatttt
     1501 cggggttgtt ccccaggtga cgccgctgtg gagttcgctt acgctctacc ggctcgaaac
     1561 caatgtgcgt tcggccacga cgctcggcat cgttggcgcc ggcggaatcg gccagacgct
     1621 ctatgaaagc atccgcagct tccattatgc ggagaccgcc gcccaggtga tcatcgtcgt
     1681 tgcaacggtg atggcgatcg accttctaag cgcacgtctt cgcaaggcgc tcgtgtaacg
     1741 acgtcactgc ctcgccgaat tttagccctt cttccccgca agccgcatgg acttctcaat
     1801 tcaatcattg gagcgggtta ttgctgatcc gggaaaaacc tcaacttggc tgataacggg
     1861 ccccaatgga cggtttgtta tgcccaaggc cgggcaactc ccacacgccg gcgccggccg
     1921 gattgatatc ggcagcaata tcgacatcga tcagataggg cttgttggct tcgacagctt
     1981 tgcgaacggc ttcggcgaga tccgcggcac gatcgacgcg tacgccgtca acgcccgctg
     2041 agcgtgccat cgcggcaaag tctggattat agcgctcgcc cgtcttggga tgatgaaagt
     2101 cggttgccag ttcccgcccc cccaagtaac cgcgctgaag gccgcggatc gacgcatagg
     2161 cgtagttgtt ccaaaccacc caaaccaccg gtaaatcgta ctccaccgcg gtgccgagca
     2221 cgttcgcatg cataaagaag gcgccgtcac cacagaccga tacacagggc cgatcagggg
     2281 cggcaaactt tgcgcccaaa acgcctgcaa cgccgaaacc cattggccca aagcccatgg
     2341 aaccgatcag cgaatcgggg cggcgcggct tgcagtagcc gagcagccag ttgtgatgca
     2401 cgccgatgtc actgattaga atggcgtcgt caggtagccc ctggtcaatt tcgaaagctg
     2461 cgcgctgcgg attgatcggt tggctgtcgt cgttaaaacc gggggcgact aatcggtccc
     2521 attcctttcg gtagccgtcg atcgcgttca gccacttctg ccgctcggcg gcgaactcat
     2581 tgagatcctc gcgacggtca agctcggcgt gcagctgtcg aagaaacgtg cgcacgtcgg
     2641 ccatgaggcc gagagcaacc ggatagtttc ggccgatctc ctccggatcg atgtcaacat
     2701 ggatgagctt ggtcggcgga atggtgaacg agtagcctgg aatccaagaa cttgaggtcc
     2761 gatcgtcgaa gcgcatccca agtgcgagca acacatcggc ctggcgcgtc gcgtggttgg
     2821 cctggtagtg acccccgcgt gcgaccaatc cgagggcgag cggatgatgc gtatcgatgg
     2881 caccaaggcc gctcgccgac gcagccaccg gaatctgcag ccgctcggcc agccgaagca
     2941 attcgtcgca agcgccaccc cagcgcactc cctgcccgac aatgatgacc ggccgatcgg
     3001 cggacagcag catgtcgacc gccttcacga ccccgtccgg atcggcaccg caacggcagg
     3061 agatgttggc tgtccattct tcaggttttg gcgcttccgt cgcggccgct tccaaaaaca
     3121 catcgaatgg cacgtcgagc accactggcc caggacgccc agtcaccatc gttttccacg
     3181 cttggcgcac tgcaagcggc accatctcgc cgcgcgtggg ttggaatact ttcttgcagt
     3241 aagagcgcac ggtcgaaggg aagtcagcct ggtagtggcg gtacaattcc tggaacgctc
     3301 cgcggttgaa ctgggcggtc ggcacgttac cggtgaccgc catgaacggc accgagtcaa
     3361 ggaaggcatt agctagcgag atcggcagat tcgcggagcc cgggccgcac gatgtgaaag
     3421 tcgcgatggg ttggccgcag acgcggtaat aaacatcggc catgaagccg gcaacgcttt
     3481 catggcgcac cgaaacggtc ttgatatcgc cccggcgctc gtagagcgca tcgatgaact
     3541 ggatattccc gtggccacac aggccgaaga cataaggcgc cttctgctgg attaaaaagt
     3601 cgacaatgac ctgtgccccg ttgagctcgt tactcgacat cgatagcgat ctccttatga
     3661 ccgcgccggc tggccgatgt ggcggtccga cggcaaccta tttctcataa tgctagacgt
     3721 caatttatat tgtggtatgc cctcatgcgt ctctcgacgg gaggagttgc tatggccatc
     3781 gaacggaatt ggttcatccg aaacatcgct caagtgccgt ggcgacagtt cccggatcat
     3841 ttcggcggtg cactgtcgaa gcctctcgtc atgcccgaga cggccggctc gcagcacctc
     3901 gactatcgaa tctcgacgta ccggccgatg gcctacgtga agatgcacaa acatgcggta
     3961 caagaacagg tctatcacgt gatcgagggc gaggggctga tccacatcga cggtgaggac
     4021 catgtcgttc gcaaacacga tttcgttttc ctgccgcctg gtatcgatca ttcgatcacc
     4081 aacaccgggc tggtcgacct cgtttttctc gttgtgacgt cgccggtcac ggatgatgta
     4141 agctaaaact cggtgatccg ctcgagcctg ggacagacgt aggcaccctg atcgacgagc
     4201 gcgccgcgga gcgggtggaa acctccgatc agtgaggcga ggataggcgg agcgcgcgtg
     4261 ctgaccgctg gaaggcatca cggtgccgct aacgaaccaa ccgtaatcgc cgatgcgaag
     4321 ccacccatgg aggtcgtgcg cgaccaggtg tttggacctg tcgcgagcct cttgccatat
     4381 gaacatatcg aggacgtctt tggcaccgtc agcgccggcc actatggcct gcagactggc
     4441 atttttacaa cctcgatgga gcttgccatc cgcgcggccc gcagcctgcg gacccggggg
     4501 cgtaatcctc aacggttcat cgacttggcg caccgatcag ctagcatatg gcggggtcaa
     4561 ggatgcaggc gttggccgag ggaccgcgat acgcgatccg tgatatgacc gaagaacgcg
     4621 tcgtgctgtt taattactga attggagatc gctttgaaaa cccaggccag cacaaagata
     4681 agaccgaaag aacttgcaac cgccccacgt aagctgccac gcctgcgtga agcgtcgcca
     4741 accgacatta accaagaggc agaagaccgc cagcgcgtgg gcgtccagtc cctcggccgc
     4801 gctttcgcaa tcctcgaaga agtcgctcga catcgcgagg gcatcggact cgccgatttg
     4861 agcaagctcg tcggcctcca caactccacg acgtttcacc tcgccaagac gctggtctcg
     4921 ctcggctata tgcgccagga acaagattcc aagcggtatc gggtcggtcg tccgctcttc
     4981 gtactcgccg caaatgcgct cgacgaaatc gagatggtca agctcgctat gccggtgctg
     5041 gaagatctat
//
LOCUS       DATILV010000143         2312 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_32704, whole genome shotgun sequence.
ACCESSION   DATILV010000143 DATILV010000000
VERSION     DATILV010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2312)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2312)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2312
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32704"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1123)
                     /locus_tag="VLJ17_03245"
     CDS             complement(<1..1123)
                     /locus_tag="VLJ17_03245"
                     /inference="COORDINATES: protein motif:HMM:NF019850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HSV22024.1"
                     /translation="MIIQARGGRVEGSDRALDQGRNAEKFDFLRARGVLLHPQDGSGV
                     SRAGQILVTSAAVEETVPDVLAAHRVGAAVTTRARLLAELFNCAALGVGVAGTSGKST
                     TVGMIGWILHRAGKNPTIMNGADMKNFIDMGSPFASARIGEGEAFVSEVDESDGSIAF
                     FEPRVAVVNNIALDHKSLDELRTLFRDFIAKAQTVVLNLDNAETAALSVDLKPGQAVT
                     YSLGAAQAHLLASPPVRSPTRIAFQVKARDTGEVVEVDLKVPGLHNMANALAALSAAN
                     ACGVALAEAAAHLGEFSGIRRRLEVVGTANEITVIDDFAHNPHKISATLETMHAFPGR
                     LLLMFQPHGYGPIRLMRDALVGCFASGMRDEDVLVMPEPV"
     gene            1240..2082
                     /locus_tag="VLJ17_03250"
     CDS             1240..2082
                     /locus_tag="VLJ17_03250"
                     /inference="COORDINATES: protein motif:HMM:NF014114.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HSV22025.1"
                     /translation="MSKERCRIGVVAPASRMSPEVAERVPTLAGSLYPDRTPEIFFHP
                     QCFAAHGHFAGDDEMRAQSFLDIANDESYDAVWFARGGYGSCRVVEAVMCRLTEPSRR
                     KAYVGYSDAGILLAALYRAGFEAVAHGPVAQDILRDAGDAAVGRALAWIIDRAPEALE
                     PTVRTAKKTAAFNMTVLSQLLGTPLQPDLDGHVLMLEEVGEAMYRIDRSLFHITTNVE
                     IRRVSGIMLGRCSAITPNEPDFGMNEEEIARYWCRRSGIPWLGRADIGHDTNNKIVPF
                     GTSV"
BASE COUNT          468 a          696 c          718 g          430 t
ORIGIN      
        1 aaacgggttc gggcatgacc agaacatcct catcgcgcat gccgcttgcg aagcaaccca
       61 ctaaggcatc cctcatcaaa cgaatcgggc cgtagccatg gggctgaaac atcagcaaca
      121 agcggccggg aaacgcgtgc atggtttcca gcgtggccga tatcttgtgg gggttgtggg
      181 caaagtcgtc gatcacggtt atttcatttg cggtgcccac gacctccagt cgccgacgga
      241 tgccgctgaa ctcgcccagg tgggccgcgg cctctgcgag ggccacgccg catgcattcg
      301 cagcgctcag agcggcgagt gcgttggcca tattatgcag ccccggaact ttcaggtcta
      361 cctcgacgac ctcaccggta tcgcgcgcct tcacttggaa cgcgattctg gtcggcgacc
      421 ggaccggcgg agacgcgagg agatgggctt gcgcagcacc cagactgtaa gtcaccgctt
      481 gccccggctt caaatcgacc gagagcgccg cggtttccgc gttatcgaga ttcagcacca
      541 ccgtctgcgc cttggcgatg aaatcgcgga aaagggtgcg cagctcgtcc agcgatttat
      601 ggtctagggc gatgttgttc actaccgcga cgcggggctc gaaaaacgca atcgagccgt
      661 cgctctcgtc cacttcactg acgaaggcct cgccctcgcc gatcctggcg ctggcaaaag
      721 gcgagcccat gtcgatgaag ttcttcatat ccgcgccgtt catgatcgtt gggttctttc
      781 cagcgcggtg cagaatccag ccgatcatgc cgaccgtcgt ggacttaccg ctcgtaccgg
      841 cgacaccaac gcccaaggcg gcacagttga agagttcggc gagaagcctt gcgcgggtgg
      901 tgacggcggc accgacacga tgcgcggcta gcacgtcggg aaccgtctcc tcaacagcgg
      961 cggaggtgac caagatctga ccggcccggc taacgccgct gccatcctgc ggatggagca
     1021 gcacgccacg tgcacgcaga aaatcgaact tttcggcatt gcgcccctgg tcgagcgcgc
     1081 ggtcagaacc ctcaacccgt ccgcccctgg cttggatgat caaagcgagg gggctcatgc
     1141 cactaccgcc gacgccgcaa aaaaagtaat ctccaagtcg ggacatcggc gaaatttaca
     1201 agcgttgccg atgaagtgca acgcaggcgg ggcgcttgga tgagcaagga gaggtgcagg
     1261 atcggcgtag tcgcgccagc ttcgcgcatg tctccggaag ttgctgagag agtgccgacg
     1321 ttggccggat cgctgtaccc ggacaggacg cccgagatct tcttccatcc ccagtgcttc
     1381 gctgcgcacg gccatttcgc gggcgatgac gaaatgcgcg cacagtcctt cctcgacatc
     1441 gctaacgacg aaagctacga cgcggtgtgg ttcgcgcgcg gcggttacgg ttcctgccgc
     1501 gtggtggagg cggtcatgtg taggttgacg gagccgtcca gacgaaaagc ctacgtgggc
     1561 tatagtgatg ccggtatact gcttgccgcc ttgtaccggg ctgggttcga ggccgtggcg
     1621 cacggtcctg tggcgcagga catcctccga gacgcggggg acgcagcggt tgggcgggcg
     1681 ctcgcttgga taatcgatcg ggcgccagag gcgttggagc cgaccgtgcg cactgcaaag
     1741 aagacagcag cattcaacat gacggtcctt agccagttgc ttggcacgcc gctgcaacct
     1801 gacctcgatg gacatgtact catgttggag gaggtggggg aggctatgta caggattgac
     1861 aggtcgctat ttcacatcac cactaacgtt gagatcaggc gggtctcggg catcatgctt
     1921 ggccgttgca gcgccattac gccgaacgaa ccggatttcg gaatgaacga agaggagatc
     1981 gcccgttact ggtgccggag gtccgggatt ccgtggttgg gacgcgccga catcgggcat
     2041 gacaccaaca acaagattgt gcccttcggg accagcgtat gacgaaacct aggcaagtgg
     2101 ccccggccag cgcataattc gcgttgcgac cacccataag gggcacccgt gctgacggta
     2161 gacaagatct accgcgctat cgccacgcga tacgacaagc tcgccccgct ccttcctcga
     2221 cgcgcttcat attgccgcta tccgcagatg cctacggtac gcaactctgt aacagggcct
     2281 agctttgaat tgtggcggca gacttcaatc ta
//
LOCUS       DATILV010000144         2541 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_288095, whole genome shotgun sequence.
ACCESSION   DATILV010000144 DATILV010000000
VERSION     DATILV010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2541
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_288095"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..523)
                     /locus_tag="VLJ17_03255"
     CDS             complement(<1..523)
                     /locus_tag="VLJ17_03255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22026.1"
                     /translation="MGRLDPRVRDAALRIIDEGIDLAKWGGSPDRAKRAEAIVKARDK
                     LLLPLPPACPMPRPLPIQLADWKVGEVVGYRLNNGRLGLFHVVRFSRCSRCKAKAPAV
                     SFLNWFRNEMPTQEEVASLTNISNPLAPSGIQTMPKLILATPRGRPLDSTRFVPPGLF
                     LDLLPGERIGSGSS"
     gene            709..2052
                     /locus_tag="VLJ17_03260"
     CDS             709..2052
                     /locus_tag="VLJ17_03260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011578756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1380 family transposase"
                     /protein_id="HSV22027.1"
                     /translation="MSVDTLLPFDLPSVARKKVSVAFDGGLLSSNGGVLLLRGVERRL
                     GLAARLAACLKDRRKPESIRHSVEEMLRLRMFAIAAGYEDADDCDALRHDPIFKMALG
                     RAPDRGEALCSQPTMSRLENAPSKIEIARLMTAMIDQFCESYRRPPAAVTLDIDDTFD
                     AVHGRQQLSLFNAHYDERCFLPIHIYEGSSGKPVAVILREGKTPSGTEVRTILKHVVT
                     RIRRHWPKVHILVRADGHYGRREAMAWCEQTPGIDYVFGLPGNPVLDAMTRPLADALC
                     VERAIGAAQTLRRFAKLRYGARSWNKERRVVARLEATTLGLDIRYIVTSLEGSAAYLY
                     ETVYCGRGQAENFIKLHKAQLASDRTSCRDPKANQLRLILHTAAYWLLHTLRAAAPKS
                     SAAAKAEFATLRLRLLKIAARVIEGAARIRVCLPTACPDAGLFKLLAGRFAATGP"
BASE COUNT          481 a          810 c          788 g          462 t
ORIGIN      
        1 tgctgcttcc agaacctatc cgttcccccg gaaggaggtc taagaatagc cccggaggca
       61 caaaccgagt cgaatcgagc ggccgtcctc ggggagtagc caatatcagc ttcggcatgg
      121 tctgaatgcc cgaaggggcc aacggattac tgatgttcgt gagcgaggca acttcctctt
      181 gcgtgggcat ttcattccgg aaccagttga gaaaggagac ggcaggcgct ttcgccttgc
      241 aacgcgagca ccggctgaaa cgcaccacat gaaacaaccc caatcgcccg ttgttcaggc
      301 gatagcccac gacctcaccg accttccaat cggcaagctg gatcggcagg ggccggggca
      361 ttggacaggc cggcggcagt ggcaagagaa gcttgtcgcg ggcctttaca atcgcttccg
      421 ctcgcttggc ccggtccggt gagccccccc atttcgcgag atcgatgcct tcgtcgatga
      481 tgcgcagagc agcatctcta acgcgggggt caagtcgtcc catgctccac tgcgttagtg
      541 ccagtcccaa ccaaaacgcc gtcgcggtgc tgagattctc gtagctagcc cgtcttattc
      601 acgcagacta gcgaagtgag cgacggatgt agcggaaagc cgcaattcga ttcatgattc
      661 tggttgcgac accgattcat ggtcggattg aggagcgcca cacccgtcat gagcgtagat
      721 actctcctgc cgttcgatct tccatcggtt gcgcgcaaga aggtgagcgt ggcgttcgac
      781 ggcggcctgt tgtcgtcgaa cgggggcgtg cttcttctgc gcggtgtgga gcggcggctg
      841 gggttggcgg cccggctggc ggcgtgcctg aaggaccggc gcaagcctga gagcatccgg
      901 cacagcgtgg aggagatgct gcggctgcgg atgttcgcga ttgcggcggg ctatgaggat
      961 gccgacgatt gcgatgcgct gcggcacgac ccgattttca agatggcgct gggccgtgcg
     1021 cccgacaggg gcgaggcgct gtgctcgcag ccgaccatgt cgcggctgga gaatgcgcca
     1081 tcgaagatcg agatcgcgcg tttgatgacg gcgatgatcg accagttctg cgagagctac
     1141 cgccggccgc cagccgcggt cactctggac atcgacgaca ccttcgatgc ggtgcacggc
     1201 cggcagcaac tgtcgctgtt caacgcccac tacgacgagc gctgctttct gccgatccac
     1261 atctacgaag gaagcagcgg caagccggtg gcggtgatcc tgcgcgaggg caagacgcct
     1321 tcgggaacgg aggtgcgcac catcttgaag catgtggtca ctcgcatccg ccggcactgg
     1381 cccaaggtgc acatcctggt gcgcgccgac ggccattacg ggcgtcgcga agcgatggcc
     1441 tggtgcgagc aaacccccgg gatcgactat gttttcggcc tgcccggcaa cccggtgctc
     1501 gacgccatga cccggcccct ggccgatgcg ctgtgcgtcg aacgcgccat cggcgcggcc
     1561 cagacgctgc gccgctttgc caagctgcgc tacggcgcca ggagctggaa caaggagcgc
     1621 cgggtcgtcg cacgcctgga agccaccacg ctcggcctgg acatccgcta catcgtcacc
     1681 tcgctcgagg gatcggccgc ctatctttac gagaccgtct attgcgggcg cggccaagcg
     1741 gagaacttca tcaagctgca caaggcgcag cttgcctccg accgtacctc gtgccgcgat
     1801 cccaaggcca accagctccg tctgatcctg cataccgccg cctattggtt gctccacacc
     1861 ctgcgcgcgg cggcgccgaa aagttccgcc gcagccaagg cggagttcgc aaccttgcgc
     1921 ctgcgtctgc tcaagatcgc cgcccgcgtg atcgaagggg ccgcccgcat tcgcgtctgc
     1981 ctgccaacgg cgtgtccgga tgcgggcctc ttcaaattgc tcgccggccg attcgcggcc
     2041 acaggaccct aagcgccgcg gcgctgtcgc cgcgatccga accctccctc gaaacctcca
     2101 acgcctccca gccgaacacc aacaacacat aaacgccgaa cgtggccgcg ttcgacgccg
     2161 ggcacccctt gcgtgtcgcg aaagaatgtc gcccccgcgc gaaaatccgc taaatccggt
     2221 gaataagaca ggtaaaccgc ttcagttgct ggcctgatcg ggcgaaattc ggaaggcttc
     2281 agccgaggtg tcgcgcggtt attcagatga agttacctgg ttcgcgatgt gaattggcaa
     2341 attggcaaag cgattcggtt cgagttaaaa tagagtgata tgcacatcct cgtaagtcgg
     2401 tcgatctttc gcgggaagaa gcctctcaga tgccgaccgc cttgcttggc tgccctgcca
     2461 tgttgatgcc ggcgcagact gccgaatacg ccacccacgg atggacgacg ggcggtccgc
     2521 tgctttcttc gaatagcctc c
//
LOCUS       DATILV010000145         2747 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2078718, whole genome shotgun sequence.
ACCESSION   DATILV010000145 DATILV010000000
VERSION     DATILV010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2747)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2747)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2747
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2078718"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            174..602
                     /locus_tag="VLJ17_03265"
     CDS             174..602
                     /locus_tag="VLJ17_03265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22028.1"
                     /translation="MLRFRMSLREDRDWAASIYRDRAELVDADEDVACFFLESYSEIC
                     RYLRVIGYGSKGKADSVEDQVARGLALGRYCSLRTTIRGKRSTQDIALFIYYDLDAHL
                     VGSGLVVLSFDTGAEVAGQFADAWFEKTDAFVRDVLSNQE"
     gene            complement(860..2590)
                     /locus_tag="VLJ17_03270"
     CDS             complement(860..2590)
                     /locus_tag="VLJ17_03270"
                     /inference="COORDINATES: protein motif:HMM:NF014068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HSV22029.1"
                     /translation="MTAPVFGALALTGRGAGVRPPPGQGDATLAERQAQAFVDALKPH
                     RPGKPVIAIVALNEGTEMTDFLLPHAVLQRAGVADVQSVAPRRGRLLLYPALQVEVAQ
                     DLASFDQAYPSGADYVIVPAMADDNNPAITAWLKQQADRGARILGVCAGALVVGRAGL
                     LDGRRCTTHWYFRRILLKRHPSAVYVPHQRYVIDGSVATTTGVTASVPTMLALVEAIG
                     GHEKAQALATELGVASWSLAHDSSLFGLTANRAWNYLLNKAAFWRHERWSVDVWDGMD
                     DIPLAFAADAWSRTGRVSIEAAASGPVALRSGLVLLAQPAAEGTARLRLTSGLKPMQQ
                     LDRTLSEIADRFGAARSEWVMMELEYVGSTSDVASDDPQGQSSLPTDAPGGPSRFPEK
                     RLGTSSLSNKMQNIEVTISQPQLNFMKEPADAAAVRIFPPAVPLFSILLGIGLNRLCP
                     FKWPLKVSRLAHYGSGGAIVCFAVLVLGLYPVILLRRTGQSENPLTPTTEIVKDGPFR
                     FTRNPLYLQMVLGCIGFSIILRNIWILLLTPLCAWVLQVFAILPEEEYLERKFGESYR
                     SYKGHVRRWL"
BASE COUNT          584 a          788 c          822 g          553 t
ORIGIN      
        1 ccgagcgagt ccaacgaaaa catatatgag gcgaaacaag tgggtccgga cagctccgcg
       61 cccccagaca gcgtgactat gagccaaacc aaggagccgg aggaggtcaa gcaaattagg
      121 ttgcctcgat tctgcgatta acagttaacc tgacttgcga catttcgaaa aacttgcttc
      181 gttttcgtat gagcctgcgc gaggatcgag attgggcggc cagtatttac cgagatcgcg
      241 cggagcttgt tgatgccgac gaagacgtcg cctgcttctt cctcgaaagc tattcggaga
      301 tctgccgtta cctgcgcgtt atcggctacg gctccaaagg taaggctgac agcgtggagg
      361 atcaggtggc gcgggggctt gcgctgggac gctattgctc gcttcgcacg acgatccgag
      421 gaaagcgatc tactcaggat attgcccttt ttatctatta cgatcttgat gctcatttgg
      481 tcggctctgg tctggtcgtg ctgagctttg ataccggtgc cgaagttgcc ggccagttcg
      541 ccgatgcttg gttcgaaaag accgacgcat ttgtcaggga cgttctttcg aatcaggagt
      601 gaaagaaagc ctgactttct ccattgggaa agcatgaagg ccgattagaa gcggcgggct
      661 cagttaggcg agactttgcc tcttgcgacc gttcctcatg gtcgagggcc accgcggcgc
      721 ctggacccgg ctacgctgcg cagtcctcca atagctaaac cggctggctg gggactcctg
      781 aatggccgcc ccgcaccaga aatgtcgttt cagcatgacg ccatgtgagg gcagaagaaa
      841 tgggcaatga tagcttagtc taaagccaac gacgaacatg gcctttgtat gatcggtagc
      901 tctccccgaa tttccgctcc aaatattcct cttcgggcag aatggcgaat acctgaagca
      961 cccatgcgca gagcggggtc aatagcaaga tccagatatt tctaaggatg attgaaaagc
     1021 cgatacagcc caaaaccatc tgcaagtaca gcggattacg tgtaaatctg aaggggccgt
     1081 ctttcactat ctctgtcgtc ggggtcaagg ggttttcgct ttgtccagtg cgacgcagga
     1141 gaatgacggg gtagagaccg agaacaagaa cggcgaaaca gacgatcgct ccaccacttc
     1201 catagtgcgc aagccgagat acctttagcg gccacttgaa tgggcaaagg cggttaaggc
     1261 ctatcccgag gagaatactg aaaagcggca ctgccggagg aaatatacgc accgcggcag
     1321 catctgctgg ctccttcata aagttcaatt gtggctgtga tattgtgact tcaatgtttt
     1381 gcattttgtt tgaaaggctt gaagtgccca atcgcttttc gggaaaacgt gaaggtcctc
     1441 ccggagcgtc ggtcggcagg cttgattgac cttgagggtc gtcactggcc acgtcgctgg
     1501 tagagcctac gtattccagt tccatcatga cccactcgga tcgtgccgcg ccgaagcggt
     1561 cggcgatctc ggacagcgtc cggtcaagct gctgcatcgg cttgagtccg gacgtcaacc
     1621 gcaagcgcgc tgtgccttcg gcagcaggct gcgccaggag caccaatccg ctgcggagcg
     1681 ccacgggacc ggaagccgcg gcctcgatgc tgacccggcc ggtgcgcgac caggcgtccg
     1741 ccgcgaacgc gagagggatg tcgtccatgc catcccacac atcgacgctc cagcgctcgt
     1801 ggcgccagaa ggccgctttg ttgaggagat agttccatgc tcgattggcc gtgagtccga
     1861 aaagcgagct gtcgtgcgcc aggctccatg aggccacccc tagctccgta gcgagcgcct
     1921 gcgctttttc gtgcccgccg attgcctcca ccaaagcaag catagtcgga accgaggcgg
     1981 taacgcccgt ggtcgtggcg actgaaccgt cgatgacgta gcgctggtgc ggcacgtaga
     2041 cggcactggg atggcgctta agcaagatgc ggcgaaaata ccaatgggtc gtgcagcgcc
     2101 gcccatcgag cagcccggcg cggccgacaa ccagcgcacc cgcgcagacg ccgaggatgc
     2161 gggcgcctcg atccgcctgc tgcttcagcc aggccgtgat cgcagggttg ttgtcgtcgg
     2221 ccattgccgg aacaatcacg tagtcggcac ctgagggata agcctggtca aagctggcga
     2281 gatcctgcgc cacctcgacc tgtagtgccg gatacaacaa gaggcgaccc cgacgcggcg
     2341 ccaccgattg cacgtcggca acgccggcac gctgcagcac cgcatgcggc agcaggaagt
     2401 cggtcatttc cgtgccttca ttgagcgcca cgattgcgat gaccggcttg ccggggcggt
     2461 gcggtttcaa agcgtcgacg aacgcctgcg cttggcgttc ggcgagcgtc gcatcgccct
     2521 gccccggcgg tggtcgaaca cccgctccgc ggcctgtcag cgctagcgct ccgaatacag
     2581 gtgcggtcaa cgggcgccta ttcaaccttc cgtagaatgc caccaagaaa cctacgcatc
     2641 ctcgctttgc gtgacgaggt cgtaagaaaa tcggtgggaa tcgaagcgag ctcaccgtct
     2701 acggagcgac ttttttcttc ggaccccttt tcctgtgtcg caatcga
//
LOCUS       DATILV010000146         5455 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2078920, whole genome shotgun sequence.
ACCESSION   DATILV010000146 DATILV010000000
VERSION     DATILV010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5455)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5455)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5455
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2078920"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..180)
                     /locus_tag="VLJ17_03275"
     CDS             complement(<1..180)
                     /locus_tag="VLJ17_03275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair exonuclease"
                     /protein_id="HSV22030.1"
                     /translation="MKFVHAADLHLDSPLLALSRHDALQVERMRRATREAFERMIDLC
                     IEQEVALLVLAGDLYD"
     gene            complement(1076..1387)
                     /locus_tag="VLJ17_03280"
     CDS             complement(1076..1387)
                     /locus_tag="VLJ17_03280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22031.1"
                     /translation="MKFALMVHDLIPVTHSSWFSHELIRWWSEKLKELIRLADHVFAN
                     SQFTAEEVRSFASENKLPIRPITTVRLGDLTFTRASSAAHLGKANGGAAPQYGGERTS
                     F"
     gene            1897..2958
                     /locus_tag="VLJ17_03285"
     CDS             1897..2958
                     /locus_tag="VLJ17_03285"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021127.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0045227 - capsule polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HSV22032.1"
                     /translation="MTAANMIMTGDVNLMKVADPSVPFAQVADEFRNTDVVFSNLECC
                     LYETPPGHSAANEGFFADPKSGKALTLAGIQVVGIANNVHYGEAPILASIARLDELGV
                     LHTGAGSNLTAARAPVVVERAGIRYGFLQRSSVYWPTNHEAQPDAAGIAVIRGHTAYH
                     VPVFKTRIGVPPPNRPGLAPQIITWADADYLGRFCDDIAALRPRVDLLVASCHWGLGK
                     EVLQYMKEIAHAAIDAGANIVVGHGPHYSLAVEVYKGRPIFYGLGSFSFHTGHDGRRH
                     DSWVGMMVRIAARQGGVASATFQFVRHNDRNETYLCRLADEAEALAEITSASDPLGTR
                     LMPEGDQVRVAGLTGEHRC"
     gene            2952..3851
                     /locus_tag="VLJ17_03290"
     CDS             2952..3851
                     /locus_tag="VLJ17_03290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007566934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HSV22033.1"
                     /translation="MLKLPSHSRYTYSPIVKRPDYTWPNGKRLAFYVAINIEHFAFQA
                     GLGMDPVRSGQQTTRNFAWRDYGNRIGNWRLFEILDELKLPATVLLNSAVCYNYPEIV
                     DKIKARGDDVVGHGRTNAELLRGMWEDDERRAIAECTEVIEKHVGVRPTGWMGPGALE
                     SSVTPDLLKETGYTHLLDWPFDDQPIWMQTRAGPLLSVPYPMELNDAGTLAHRDHTGR
                     EFADMIVDQFEEMLDQSERQPLVCALSLHGFIVGQPFRLRPLRQAIRHCVAHKDKDRV
                     WYTRAGDIAKYCFAMPKGIIPGS"
     gene            complement(3876..>5455)
                     /locus_tag="VLJ17_03295"
     CDS             complement(3876..>5455)
                     /locus_tag="VLJ17_03295"
                     /inference="COORDINATES: protein motif:HMM:NF040438.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta hydrolase domain-containing protein"
                     /protein_id="HSV22034.1"
                     /translation="AITGGAMARIMNASGKNSRPMMVHSNPMPYRPASLDTKRASLTT
                     HASETIDGVIVGAADIASADWAFAKCSAESPFPGTPDPTQICLKNGFDPNLLYEVTFT
                     AKDPPVLGIGFAAFRDVGAFFRNAAQDDVGTLNPIAGRVSWAITRGVSQSGNFVRGFI
                     HLGFNQDEAGRQVYDGAWPIIAGRRIALNYRFALPDGVLRLYEAGSEGPQWWADAVDP
                     VRGLPAGGILARCNASHSCPKIIEHFGAAEVWGLKLTPEWVGSAGDVDLPLPGNVRRY
                     YIPSTQHGGGPGGFSTTAAPAPACPSFGWGTGVLPSNPVPHTQTVNAIRAHFRNWVMK
                     EVAPPPSRYPTLAAGTLVDATSEAMGFPALPGLPGHAPSGLINPGLDYDFGPEFNYMD
                     VSGVQSVVPPRIKQVIRLKVPRVDADGNEMGGVPVVLRDAPLGTYLGWNITAAGFHKG
                     HICNYAGGMIPFSKSKAERTTNEDPRPSLEERYVNHAGYVAAVEAAARKAVAEGFLLE
                     QDAKALIAAADASDVLK"
BASE COUNT         1067 a         1635 c         1647 g         1106 t
ORIGIN      
        1 gtcgtagagg tctccggcga gcaccagcaa cgcgacctct tgttcgatgc acagatcgat
       61 catgcgctcg aaggcttcgc gcgtggcgcg ccgcattcgc tcgacctgga gcgcatcatg
      121 acgcgataac gccaatagcg ggctgtccag atggagatct gcggcgtgaa caaatttcat
      181 tgcattgacc cggcttgcgc ctttgcccat cgatgcactt cttcccgggg gaagcattag
      241 cagcgatgcg ggccccggcc caaacgagtg ggcggcaggc ttgtggatgg atatcaagaa
      301 gccagtgcgc gaccggacga agtccctgct ccgacggaat aatttttgcc cgtgcgcatg
      361 aattctccgc ccccgggcgc gcgattcccc gcgccgcaag ggtaggaaga atcatgctct
      421 cttgcgaatc accgggccga accaggtgct gtcgtttagg atgggttgag cgctggcgaa
      481 ttcattcgat ctggcgaacg cgattggaat tggcttggat atccattcgg cgaagcggcg
      541 cttcaggagt tgcgccaggc tgttgcatct tactcaacgc cgcgaggatg gccctgttgc
      601 ccattctgtt ggtcgatatt ggttggcaat aatcgactca agtcgagcca tctcggctgg
      661 attaacgatc aagctgctaa tgaggttgta agcgccattc gagtcattta ccgcgaaata
      721 ggaaacgaga tctccgccga cctccggaat ggaatcaaca tccgacgaaa cacaaacttt
      781 tccaaatgac aggctctccg ccaccgggaa gcccagccct ccgcgagact ggggaacacc
      841 gtgaacaatg ctttctgata ataccaagca agctcgttgt cttggacgct gttgaggacg
      901 acgaccttta attccggact gttatccagc aaagactgaa actcactact gcggttgcca
      961 ttcttgccga tcagaaggag gtccggcgtg gcctctcgtc caagctcgcg tatcagacgg
     1021 ctccagatcg gaagctggaa cttttgattt ttgcgtatat cgaaactgga taccatcaaa
     1081 acgaagttcg ttcccccccg tattgtgggg cagcgccgcc gttggccttg ccgagatgcg
     1141 cggcactcga agcccgcgtg aatgtcaggt cgccgagtct cacagtcgtg attggcctga
     1201 ttggtaactt gttctcagag gcaaagctgc ggacttcttc ggccgtgaat tgcgaatttg
     1261 caaaaacatg atcggccagt cggattagtt ccttgagttt ttctgaccac caacggatca
     1321 actcgtgcga gaaccaagag gaatgagtga ccggaatgag atcgtgaacc atcagcgcaa
     1381 acttcatgtc gttgacgaaa accgctttct gtattctgtc gacgtgatct agattgtgcc
     1441 agaaggctcc aaggaaaata aaaatatcac ctcggtgaaa gtctgctttg gactcgatcg
     1501 gaatccttct tcttgtcgcc ggcttttttc cctatcccga gcgtgctcct aagttttctg
     1561 ggtacgagtg aaactgccgt cttgacgatt cgcctcttga cccgattcgc ctggcctgtg
     1621 tgttttcata tcgctccgcg taagtcagca catcttcgaa ggacaccgtc ttgaaaaccg
     1681 cgtcttcctc gcaatacgtg cagatctggc aatgacgagg caccgcgcac atcgcggcag
     1741 tcaggtcaag cgtggcacgc tggattgcgg tctccgatgg cgcagttgca agaaaatcga
     1801 taacgtcggt gatattggtc cacgtcatgg tgccggccga cattgaagaa ttgcaagtgg
     1861 cttaggctca acgcaacaac atcaggacat tgtggaatga ccgcggccaa catgatcatg
     1921 actggtgacg tgaatttgat gaaagttgcc gacccaagtg tacccttcgc gcaggttgca
     1981 gatgaatttc gcaacacgga tgtggtgttc agcaatcttg agtgctgtct ctacgaaacg
     2041 ccgcctggcc attcggccgc caacgagggc tttttcgccg atccgaaatc cggcaaagca
     2101 ctgacgctcg ctggcattca ggtggtcggc atcgccaata acgtgcatta cggagaagct
     2161 cccattctgg cctcgattgc ccgcctcgac gaactcggcg tgttgcatac cggcgccggc
     2221 agcaacctga cggctgcacg ggcgccggtc gtggttgagc gggcgggcat ccgctacggc
     2281 tttctgcaac gcagttcggt ctattggccg accaaccacg aagcccaacc agatgccgcc
     2341 ggcattgcgg tgatccgcgg tcacaccgcc tatcacgtgc cggtgttcaa gacccggatt
     2401 ggggttccgc cacccaaccg cccgggcctt gcgccgcaga tcatcacctg ggccgatgcc
     2461 gactatctgg gtcggttttg cgacgacatt gctgccctac gtccgcgtgt ggacctgttg
     2521 gtggcctcat gccactgggg gcttggcaaa gaggtcttgc aatacatgaa ggagatcgcc
     2581 catgcggcga tcgacgcggg cgccaatatc gtggtcggtc acggcccgca ttattcgttg
     2641 gcggtcgagg tctacaaggg acggccaatc ttctacgggc tcggtagctt ttcgttccac
     2701 accggccacg acggacggcg gcacgacagc tgggtcggca tgatggtgcg tattgcggcc
     2761 cgccagggcg gcgttgcatc cgcgacgttc cagttcgttc ggcacaacga tcgcaatgag
     2821 acctatctgt gccggctcgc ggacgaggcc gaggcgctcg ccgagatcac cagcgccagc
     2881 gatccactcg gcaccaggtt gatgcccgag ggagaccagg tgcgggttgc agggctgaca
     2941 ggagaacacc gatgctgaaa cttcccagcc actcacgcta cacctattcg ccgatcgtaa
     3001 agcgaccgga ttatacttgg ccgaacggca agcgcctcgc tttctatgtc gcgatcaata
     3061 tcgaacattt cgcgtttcag gccgggctcg gtatggatcc ggtgcggagc ggccagcaga
     3121 cgacgcgtaa tttcgcatgg cgcgattatg gcaaccgcat cggcaattgg cgtctgttcg
     3181 aaatccttga cgagcttaag ctgcccgcga cggtcctgct caacagcgcg gtctgctaca
     3241 attatccaga gatcgtcgac aagatcaaag cgcgcggcga cgacgtggtc ggccatggcc
     3301 gcaccaatgc cgagcttttg cgcggcatgt gggaagacga cgagcgtcgc gcgattgcgg
     3361 aatgcaccga ggtcatcgag aaacatgtgg gcgtgcggcc gactgggtgg atgggcccgg
     3421 gggcgctcga atccagcgtc acgcccgacc tcctcaaaga gaccggctac actcatctgt
     3481 tagattggcc gtttgatgac cagccgattt ggatgcagac gcgcgccggg ccgctgcttt
     3541 cggtaccata tccgatggaa ctgaacgacg ccggtacgtt ggcgcatcgc gaccacaccg
     3601 gccgcgagtt cgccgacatg atcgtcgacc agttcgagga aatgctcgat cagtccgagc
     3661 gccaaccgct ggtttgtgcg ctgtcgctgc acggattcat cgtcggccag ccgttccgtt
     3721 tgcgcccgct gcgccaagcg attcgccatt gcgtcgcgca caaagacaag gatcgcgttt
     3781 ggtacacccg cgctggcgac atcgcgaagt attgctttgc gatgccgaag gggatcatcc
     3841 cgggaagttg aaccagcgat gtgggtgcgc ctctcttatt tcagcacgtc gctcgcgtca
     3901 gccgccgcga tcagcgcttt ggcgtcctgc tccaacagga acccttccgc aaccgccttg
     3961 cgggcggcgg cctcgacggc ggcgacgtag ccggcgtggt tgacgtagcg ctcctccagt
     4021 gacggacgcg ggtcttcgtt agtagtccgt tccgccttgg acttgctgaa cgggatcatg
     4081 ccgcccgcgt agttgcagat gtggcccttg tggaagcccg ccgccgtgat gttccagccc
     4141 agataggtgc cgagcggcgc atcgcgcagt acaaccggta cgccgcccat ttcgttgccg
     4201 tcggcatcga cccgcggcac cttcagccgg atgacttgct tgatgcgggg tggcaccacg
     4261 gactgcacgc ccgaaacatc catgtagttg aactcggggc cgaagtcata gtcgagcccc
     4321 ggattgatga ggccactcgg tgcgtgcccc ggcaggcccg gcagcgccgg gaaacccatc
     4381 gcctcgctgg tggcatcgac gagcgttccg gcggcgagcg tcgggtaacg gctcggcggc
     4441 ggcgccactt ctttcatcac ccaattgcgg aagtgcgccc ggatcgcatt caccgtctga
     4501 gtatgcggta ccggattgct cggtagcaca ccggtgcccc atccgaagct cgggcaagca
     4561 ggcgccggtg ccgccgtggt gctgaatccg cccgggccgc cgccatgttg ggtgctcggg
     4621 atgtagtagc ggcgcacgtt gcccggtagc ggcaggtcga catcgccggc cgagcccacc
     4681 cattccggcg tgagcttcaa gccccagacc tccgcagcac cgaaatgctc gatgatcttc
     4741 ggacagctgt ggctagcgtt gcagcgggcg aggatgccgc cggcgggcag gccgcgcacc
     4801 gggtcgactg cgtccgccca ccattgcgga ccttcgctgc cggcctcata gagcctgagc
     4861 acgccgtccg gcaacgcgaa gcgatagttc agcgcgatcc gtcgtcccgc aatgatgggc
     4921 caggcgccgt catagacctg tcggccggct tcgtcctggt tgaagcccaa atggataaag
     4981 ccgcgcacga aattgccgga ctgcgagacc ccgcgcgtga tcgcccacga caccctgccc
     5041 gcgatcggat tgagcgtgcc gacatcatcc tgagcggcgt tgcggaagaa cgcgcccaca
     5101 tcgcggaatg ccgcgaagcc aatgccgagt accggcggat ccttggcggt gaacgtcacc
     5161 tcataaagga gattcggatc gaagccgttc ttgagacaaa tctgggtcgg atcgggtgtg
     5221 ccagggaacg gactttcggc actacacttg gcgaacgccc agtcggcaga cgcaatgtcg
     5281 gcggccccca cgatgacgcc gtcgattgtt tcagaggcgt gggtggtaag gctcgccctc
     5341 ttggtgtcga ggctcgccgg ccgatacggc atcgggttgc tgtggaccat catcggccgc
     5401 gagtttttgc cggacgcatt catgatccgc gccatggcgc cgccggtgat cgccg
//
LOCUS       DATILV010000147         3784 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4121772, whole genome shotgun sequence.
ACCESSION   DATILV010000147 DATILV010000000
VERSION     DATILV010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3784)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3784)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3784
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4121772"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1716)
                     /gene="poxB"
                     /locus_tag="VLJ17_03300"
     CDS             complement(<1..1716)
                     /gene="poxB"
                     /locus_tag="VLJ17_03300"
                     /EC_number="1.2.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012494991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_function: GO:0052737 - pyruvate dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_process: GO:0006090 - pyruvate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone-dependent pyruvate dehydrogenase"
                     /protein_id="HSV22035.1"
                     /translation="MKAADVITEVLHSVGVRRIYGVVGDSLNGITESLRRRGDIDWIH
                     TRHEEAAAFAAGAEAHLTGDLAVCAGSCGPGNLHLINGLFDCHRSRVPVLAIAAHIPS
                     AEIGRGYFQETHPESLFRECSHYCELVSHPEQLPSVMESAMRAAVGHRGVAVVVIPGD
                     VALQSLSAPVSAGSSIAIRQPVVVPVEHDLDALAALLNESKRTTLLCGRGCAGAHEML
                     LKLADTLKSPIVHALGGKEYVEYDNPFDVGMTGLIGFSSGYHAMLDCDTLLMLGTDFP
                     YRQFYPTNSKIAQIDIRPENLGRRTRLDQGLVGDVAATIGALLPKLKTKTDRSHLDDG
                     LANYRKARAGLDELATGKPGRRPIHPQYVAKLIDKHAADDAVFTFDVGTPTIWAARYL
                     KMNGRRRMIGSLAHGSMANAMPQAIGAQAAFPGRQVISLSGDGGFAMLMGDFLTLVQQ
                     KLPVKIVVFDNRVLGFVALEMKASGFLEIGTSLTNPDFAAMARAIGVHALRVEDPGEL
                     EDAIKDVFAHNGPALLDVVTNTQELAMPPSISLEQVKGFGLWAIQAVISGRGTELIDL
                     ARTNLL"
     gene            complement(1806..3206)
                     /locus_tag="VLJ17_03305"
     CDS             complement(1806..3206)
                     /locus_tag="VLJ17_03305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HSV22036.1"
                     /translation="MTELWRLPATELAQLVRTRKVSAREASEAALQRLDAVNPKINAV
                     VAHRPDLVLQQADRIDQMVARGEDPGVLAGVPVTVKVNIDQAGFATTNGTLLQKDLIA
                     KTNSPAVDNLVRAGAVLLGRSNAPTFALRWFTSNLVHGHTSNPRNPALTPGGSTGGGA
                     AAVTAGIGHLAVGTDTGGSLRYPAYACGVHGLRPTLGRVPAYNASSPERAIGPQLMSA
                     TGLIGRTVEDLRVALAVMSAPDPRDPWWVPAPLQGPAAPLRATMCLRPGGLPIVQEVE
                     AAVLDAGRRLADAGWQVEEIEDVPSLSEAAGVQARLWLGDGFAELSEAAARDGDPGAL
                     AVVSAFRTKAATFGCDVVARALLQRATVTREWRLFLAEHPVLLLPVSAELPFPDGLDL
                     EGDAGFWRVWKAQLVQRALPAMGLPGLTVSTNLIGSIPVGVQIVAGHFREDLCLLAGK
                     AIEARGTPVAPIDPGG"
     gene            complement(3297..3686)
                     /locus_tag="VLJ17_03310"
     CDS             complement(3297..3686)
                     /locus_tag="VLJ17_03310"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HSV22037.1"
                     /translation="MKDQAATIVVTKDAPSPTGPYVQGLAGAGLVFVSGQLPIRPDGT
                     GLQDKGFDAQVRQALANVFAIVRAGGSAPERILKVTAFIVGAEHQPLFNKIYADAFGD
                     HRPTRSLVPVSGLNNGSLIEIEAIALK"
BASE COUNT          722 a         1203 c         1172 g          687 t
ORIGIN      
        1 caacagattg gtccgcgcta ggtcgatcaa ctctgtgccg cgcccgctaa tgacggcttg
       61 tatggcccag agaccgaagc ccttcacctg ctccagactg atgctcggag gcatggctaa
      121 ctcttgagta ttcgtcacca cgtcgagcaa cgccggtccg ttgtgtgcga aaacgtcctt
      181 gatggcgtct tccagttcac cggggtcctc aacgcgcagg gcatgaacgc cgatggcccg
      241 ggccatcgcc gcgaaatctg gattggtcag agaggttccg atctccagaa acccgctggc
      301 cttcatttcc agtgcgacaa accccaatac acggttgtcg aacactacga ttttgacagg
      361 cagcttttgc tgcaccaggg tcaggaagtc gcccatcaac atagcgaaac cgccgtctcc
      421 cgagaggctg atgacctgcc gccccggaaa agcggcctgc gcaccgatcg cctgcggcat
      481 cgcattggcc atcgagccgt gtgcgagtga tccgatcatc cggcgtcggc cgttcatctt
      541 caaatagcgc gccgcccaaa tggtcggtgt gcccacatcg aaggtgaata ccgcatcatc
      601 tgcggcgtgt ttgtcgatca gcttggcgac gtattgcggg tgaatcggtc tgcggccggg
      661 ctttccggta gcgagttcgt cgaggccagc gcgtgccttg cgataattgg caagcccgtc
      721 atcgaggtgg gatcgatcgg tcttggtctt cagcttgggc aacagcgcgc caattgtcgc
      781 cgccacatcg ccgacgagac cctggtccag ccgcgtgcgt cgtcccagat tctccggacg
      841 aatgtcgatc tgcgcgatct ttgaattggt cgggtagaat tgccggtacg ggaaatccgt
      901 acccagcatt aacagcgtgt cgcaatccag catggcgtga tagccggagc tgaagccgat
      961 caaaccggtc atgccgacgt cgaagggatt atcgtattcg acatattcct tgccgcccaa
     1021 ggcatgtacg atcggcgatt tcagcgtatc agccagtttt agcaacatct cgtgcgcgcc
     1081 ggcgcagcct cgcccgcaca gcagcgttgt ccgcttgctt tcattaagca gtgcggccaa
     1141 cgcgtcgaga tcgtgctcca ccggaaccac gaccggctga cgaatcgcga tcgagctacc
     1201 ggcggaaacc ggtgccgaca acgattgcag cgccacgtca ccgggaatca cgacgacggc
     1261 cacgccgcga tgaccaaccg ccgcccgcat tgccgattcc atgacagagg gaagctgttc
     1321 cggatgggag acgagttcgc agtaatggct gcactcacgg aacaacgatt cgggatgtgt
     1381 ttcctggaaa tagccgcggc cgatttccgc gctcggaata tgcgctgcaa tggccaacac
     1441 tggcactcgc gagcgatgac aatcaaaaag gccgttgatc aggtgcaggt tgccggggcc
     1501 acagctgccg gcacagacgg cgagatcgcc ggtcagatgc gcttccgcgc cagcagcgaa
     1561 tgcggcggct tcctcatgcc tggtatggat ccagtcgata tcgccgcgtc ggcgcaacga
     1621 ttccgtgatg ccgttgagac tatcgcccac gacgccatag atacggcgga cgccgaccga
     1681 atggagcact tctgtgataa cgtcagccgc tttcatggtc ttctccagga gtgaggaact
     1741 attggttcct tgacgggcga tgagttgccg ttccaggcgt cctaattgtc atcctgcatt
     1801 tgcgatcacc cgccaggatc gatcggggca acgggcgtac cgcgagcctc gatcgccttg
     1861 cccgcgagca aacacaaatc ttcccggaag tgaccggcga cgatctgtac gccgaccggg
     1921 atggagccta tcaggttggt cgagacggtc aggcccggca accccatggc cggcagtgct
     1981 ctctgcacga gctgcgcctt ccagacgcgc cagaagcctg catcaccctc gaggtcgagc
     2041 ccgtcgggaa acggcagttc ggccgagacc ggcagcaaca gcaccgggtg ctcggcgagg
     2101 aacaaccgcc attcgcgcgt cacggtggcg cgctgtagca gcgcgcgggc gaccacatcg
     2161 cagccaaatg tcgcggcctt ggtgcgaaat gccgagacaa ccgcgagcgc accgggatcg
     2221 ccatcacgcg cggcggcctc cgacagttcc gcaaaaccgt cgccgagcca caaacgcgcc
     2281 tgcacgccgg cggcctcgct caacgaaggg acgtcctcga tttcttccac ctgccatccg
     2341 gcatcggcaa gccttcgtcc ggcgtcgagc acggcggctt cgacctcctg gacgatcggc
     2401 aagccaccag ggcgcaggca catcgtggcg cgaagcggcg ccgcgggacc ttgcagtggc
     2461 gccggcaccc accaggggtc gcgaggatcg ggagccgaca ttactgcgag cgcaacgcga
     2521 agatcctcga ccgtgcggcc aatcagcccg gtcgcggaca tcagttgcgg gccgatggcc
     2581 cgctccggag aggacgcgtt ataggccgga acccgcccga gagtcggccg cagcccgtgg
     2641 actccacagg cataggccgg atagcgcagc gaaccgccgg tatcggtacc gacggccaga
     2701 tggccgatcc cggcagtcac ggctgcggcc ccgcccccgg tcgagccgcc cggtgtgagc
     2761 gccggattgc gcggattact ggtgtgacca tggaccagat tgctcgtgaa ccagcgcaac
     2821 gcaaaggtcg gtgcgttgct gcggccgagc agcaccgcgc cggcgcgtac cagattgtcg
     2881 acggcagggc tgttggtttt cgcgatcagg tccttttgca gaagtgtgcc gttggtggtg
     2941 gcgaatcccg cctgatcgat gttgaccttc accgtcacgg gaacgccggc caggacgccc
     3001 gggtcctcgc cgcgggccac catttgatcg atccggtcgg cctgttgcag caccagatcc
     3061 ggccggtggg cgacgactgc attgatcttc gggttgacgg catcgagccg ttgcagcgca
     3121 gcctcggaag cctcgcgggc ggagaccttg cgcgtgcgca cgagctgggc caattcggtc
     3181 gcgggaagac gccagagttc ggtcatgatc tttccaatct ctgaatgaga ccgccaccgc
     3241 gtcggatgcg tcagccccca acctgtcacg agctagcggt cacagcattc gattgttcat
     3301 ttcaatgcga tggcttcgat ttcgatcagg cttccattgt tcagtccgga caccggcacc
     3361 agcgaccggg ttggacgatg gtcgccaaag gcgtccgcgt agatcttgtt gaacaaaggc
     3421 tggtgttccg caccgacgat gaaagcggtc accttgagaa tccgctcagg tgcggagccg
     3481 ccggcccgga cgatggcgaa cacgttcgca agagcctgcc ggacctgcgc atcgaatccc
     3541 ttgtcttgaa ggccggtccc gtccggtcgg atcggaagct gaccggacac gaacacaagc
     3601 cctgcgccgg ccagcccttg gacatagggg ccggtcggtg acggcgcatc tttcgtcact
     3661 acaattgtcg ctgcctggtc tttcatgttc aaaactcctc gagctgccgt tggcgcgtgg
     3721 ggcgccctgc ggaccggtta cgtcggcctg cagggcgaac ccagctatga cgatcaggtt
     3781 tcgg
//
LOCUS       DATILV010000148         3216 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2844002, whole genome shotgun sequence.
ACCESSION   DATILV010000148 DATILV010000000
VERSION     DATILV010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3216)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3216)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3216
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2844002"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..383)
                     /locus_tag="VLJ17_03315"
     CDS             complement(<1..383)
                     /locus_tag="VLJ17_03315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22038.1"
                     /translation="MGKQRREQPQDGIFGDNPFVDGFLEWMGSREGQQCIEIHDVLWD
                     LLEDVQLDAKQRQLIWPDAERTARKQRLDLDQSVQRIQKLHSDFARGEVEEFLLDWID
                     MGYDPENYSQAQLDELDGLTERWVA"
     gene            613..2043
                     /locus_tag="VLJ17_03320"
     CDS             613..2043
                     /locus_tag="VLJ17_03320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSV22039.1"
                     /translation="MPDRALSLSLSLWGIWWNAILVLRPAFSRLRTFMWFVTAVAGLT
                     VRVDLLGVTSVVRALNLRSRLYTKLLQHFHSSGIKLDRLSALWARTVLQLFPSPVRVN
                     GRLVLVGDGVKAPKRGKKMPAVKLLHQQSESNTKPEYIMGHSMQAVGLLVHAAKSVFS
                     VPLAVRIHEGLVWSNRDKRTLLDKMLGLLDILAIKVPFYFVADAYYAAGKVVNGLLKQ
                     GNHLVTRVKSNAVAYAPATQKKGRRKKGRPKTYGKKIKLKSLLANVKSMQQVASPVYG
                     ERNVTLRCRVCDLLWRPAGRLVRFVAVIHPTRGSCILMCTDTSLSAVEIIRLYGLRFK
                     IECSFKQAVRQIGSFAYHFWMKDMTPLRYRNGNQYLHRKSDDYRNRVKRKMRAYHTFI
                     QAGVVAQGLLQYLAVAAPKLVWDTFGSWLRTIRPGIPPSEFVVANALRQTLPEFLMAP
                     AKSDSLTKFIAERQDTENMRIFRLAS"
     gene            2137..3096
                     /locus_tag="VLJ17_03325"
     CDS             2137..3096
                     /locus_tag="VLJ17_03325"
                     /inference="COORDINATES: protein motif:HMM:NF033563.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS30 family transposase"
                     /protein_id="HSV22040.1"
                     /translation="MSNYRRIMYEDRCQIHALSKRGASQESIAEVLGISQSAVSREMC
                     RNRGQRGYRFKQAEAKAQARQAIRSKTRKLTAPLRRRIEAKLRQMRWSPEQISGWLCE
                     QGIKLSHECIYQMIWQDKRDGGDLWRGLRRRGKRYNKRAGKNAGRGLIPNRIDISERP
                     AIVVRKTRLGDWEGDTVVSAGRKGGLLTLVERKTKLTKIAKLPRATARATQKAAVRRL
                     KPIADFVHTITFDNGKEFATHQDITHALKATIFFATPYHAWERGLNENTNGLIRDFFP
                     KGTDFSTIANAEIAKVERLLNARPRKSLGFRSPQEVFHSLAYS"
BASE COUNT          688 a          957 c          894 g          677 t
ORIGIN      
        1 tcggcgaccc atcgctctgt gaggccgtca agttcgtcga gttgcgcctg ggagtagttt
       61 tccggatcgt agcccatgtc aatccagtca agtaagaact cctcgacctc gccgcgggca
      121 aaatctgagt gcagtttctg gatgcgctgg acggattgat cgagatcgag ccgttgtttt
      181 cgcgccgtac gttctgcgtc aggccagatc agttggcgtt gtttggcgtc gagttgcacg
      241 tcctccagca aatcccagag gacatcgtgt atctctatgc attgctggcc ctcacgcgaa
      301 cccatccact caaggaatcc gtcgacaaag gggttgtccc cgaagatacc gtcttgtggt
      361 tgttcgcgac gttgcttgcc catgaggtcc tcaaacaggt tgggccgtca cggcccgttt
      421 tgtattggcg cggtggcgcg tgctcccgga tatccatcgt gccggcgagg cgccggaata
      481 ctcgtggcct ccgattcccg caacgcagcg cgtctcgtct tatccggatc atgagcccga
      541 tcatggttaa cgaattgtga atctatggtg cctattgggt gacccgaccc aacttgaacc
      601 atggatacga ccatgccgga tcgggcactg tcactatcgc tatcgttgtg gggcatctgg
      661 tggaatgcaa tccttgtttt gcgcccggca ttctcgcgtc tgcgcacctt catgtggttc
      721 gtcaccgccg tggccggcct gaccgtgcgg gtggatttgc tcggcgtcac cagcgtcgtg
      781 cgcgccttga atctgcgatc caggctctac accaagctgc tccaacactt tcacagcagc
      841 ggcatcaagc tcgaccggct ttcggccttg tgggcgcgaa ctgtgctgca gctgttccca
      901 agccccgtgc gggtcaatgg ccggctggtt ctggtcgggg acggcgtcaa agcccccaag
      961 cgcggcaaga aaatgccagc cgtaaagctt ttgcatcagc aatcggaatc gaacaccaag
     1021 cccgagtaca tcatggggca ttccatgcag gctgtcggct tgctcgtcca tgcggccaag
     1081 agcgtctttt ccgtgccgct cgccgtgcgc atccatgaag gtctggtatg gtccaaccgc
     1141 gataagcgca ccttgctcga caagatgctc ggcctgctcg atatcctggc tatcaaggtt
     1201 ccgttctact ttgtcgccga tgcctactac gccgccggca aggtagtgaa cggcctgctc
     1261 aagcaaggca accatctggt gacccgggtc aaatccaatg cggtggccta cgctcccgct
     1321 acgcagaaga aaggccgaag gaaaaagggg cgacccaaga cctacggcaa gaaaataaag
     1381 ctcaagtctt tgctcgcgaa tgtgaaatcg atgcagcagg ttgccagtcc ggtttacggc
     1441 gagcgcaacg tcactctgcg ctgccgcgtc tgtgatctgt tgtggcgccc ggcgggtcgg
     1501 ctcgtacgct ttgtggccgt catccacccc actagggggt cttgcatcct gatgtgcacc
     1561 gatacgtcgc tcagcgccgt cgagatcatt cgtctctatg gcctgcgctt caagatcgag
     1621 tgcagcttca agcaggccgt acgccagatc ggttcattcg cctaccattt ctggatgaag
     1681 gacatgactc cgttgcgcta ccgcaatggc aatcaatatc ttcatcgcaa gtcggacgat
     1741 taccgaaacc gtgtcaaacg caaaatgcgc gcctatcata ccttcatcca ggccggcgtt
     1801 gtcgcccagg ggttgctcca atatctcgct gtcgctgctc ccaagctggt ttgggatacc
     1861 ttcgggtcct ggctgcgaac cattcgtccc ggcatcccgc cctccgaatt cgtcgtggca
     1921 aacgcgctgc gccagacgct tcccgaattt ctcatggctc ccgcaaaaag cgattctctc
     1981 acgaaattca tcgctgagcg gcaggacaca gaaaatatgc ggattttccg cttggcttcg
     2041 tgaacaaaaa gacggactct tgaggattca actacccagt gcataattga gtaaggccac
     2101 gaaggggtag cctcttgaga tttcgagagg ctgccgatga gcaactaccg acggataatg
     2161 tatgaggatc gctgccagat tcatgcgctg agcaagcgtg gggccagcca agaaagcatc
     2221 gctgaagttt taggcataag ccagagcgcg gtgtcccgag agatgtgccg caaccggggg
     2281 cagcgcggct atcggttcaa gcaagcggaa gcgaaggctc aggcacgcca ggcaatacgg
     2341 agtaagaccc gcaagctgac tgcgccgttg cggcgtagga tcgaggcaaa gttgcgccaa
     2401 atgcgctggt cgccggagca gatcagcggc tggctctgcg aacagggcat caagctgagc
     2461 catgaatgca tctaccagat gatctggcag gacaaacgcg acggcggcga cttgtggcgc
     2521 ggtctacgcc gacgcggaaa acgttataac aaacgtgccg gtaagaacgc cgggcgcggc
     2581 ctgatcccca atagaatcga catttccgag cgcccggcaa tcgtcgtgcg caaaactcgt
     2641 ctgggagact gggagggtga tacagtcgtc agcgctggac gcaagggcgg cttgctcacg
     2701 ctggtcgagc gcaaaaccaa actgaccaaa atcgccaagt tgccccgtgc caccgcccgc
     2761 gcaacccaga aagcagccgt gcgccgcctc aagcctattg cggacttcgt gcacaccatc
     2821 acattcgaca acggaaagga gtttgccacg catcaggaca tcacccatgc cctaaaggcc
     2881 acaatctttt tcgccacgcc gtatcatgca tgggagcgcg gcttgaatga aaacaccaat
     2941 ggtctcatcc gcgacttctt tccaaagggt acagacttct ctacaatcgc caatgccgaa
     3001 attgccaagg tcgaacgttt actcaacgcg agaccccgca aatccctcgg cttccgttca
     3061 ccgcaagagg tttttcactc cctcgcttac tcttaaattt ctatgcgctg gctacttgaa
     3121 tccgcgctag tattgatgga cactcacgag cacttattcg acgaccgcac gccgggcgtc
     3181 gaggagcatg agccgacagc cagctacctg acatat
//
LOCUS       DATILV010000149         6276 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2590384, whole genome shotgun sequence.
ACCESSION   DATILV010000149 DATILV010000000
VERSION     DATILV010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6276)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6276)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6276
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2590384"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            105..272
                     /locus_tag="VLJ17_03330"
     CDS             105..272
                     /locus_tag="VLJ17_03330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22041.1"
                     /translation="MLSVRFSGGHACNPVALALDLSPTGEVKRQTLANKNNGRAAVNA
                     GSIPLILSPAA"
     gene            complement(250..1317)
                     /locus_tag="VLJ17_03335"
     CDS             complement(250..1317)
                     /locus_tag="VLJ17_03335"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV22042.1"
                     /translation="MLSILIVDDDDGDRRLLRRALNQAGLSYNCVEAVSVEKAMEVCG
                     QRAFDCAIVDYRMPSCNGLEGIAALHRLNPYMPIIMGTGQGDELVATEAMKRGATDYM
                     PKGTIHAESIKRGIENAMEKAALRRKLAEQQQELENFARVLVHDLKAPITAIQSFAAF
                     AEKSIAEGKSEQGTAHCRRIVKASQRMDALIDTLHQYTKADTQIEFEPVEMSGVLKGV
                     LSNLRPVIDERGALVTQDPLPAVTGHAPQLVQLLQNLIGNGIKYCEAQCPSVHIAAAA
                     QRGGEWLLSVKDNGIGIPEQYYQEVFEPFKRLDGAGRYEGSGLGLATCKKIVERHGGT
                     IRCESVMGEGSTFFFTLRGTG"
     gene            complement(1328..1774)
                     /locus_tag="VLJ17_03340"
     CDS             complement(1328..1774)
                     /locus_tag="VLJ17_03340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012322125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV22043.1"
                     /translation="MTVTNGSGQPLTILLVEDDDGDARAIERAFVRAKIANPITRVVD
                     GIAGLEALKGQNGRAPLRSPYVMLVDLNMPRMNGIQLVEALRQDEKLRRSIVFMLTTS
                     KRDEDKIAAYNLNVAGYITKQTAGEDFVNLVTLIGAYWRIVEMPPS"
     gene            complement(1774..4638)
                     /locus_tag="VLJ17_03345"
     CDS             complement(1774..4638)
                     /locus_tag="VLJ17_03345"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSV22044.1"
                     /translation="MPPEALMGQHATWNRIAVGSACFVLVLGAAMETVWVVGGTKVGA
                     LWPGFFDIKFNTALAFCSCGIGLAAALRNQKTWTLAAAGLLLVVSATTLVEYVTSLDL
                     GIDQLLMRDFSDPAALHPGRMSAATALAFACAGLHLLLIADNRQWGIIGVVALQLLGL
                     LIFSLAATAAVGHLQGNEFAYSWSSYAHMSPQTAVGLVAVSVGLLAVEWRRSRPGIAH
                     IPLWVPCFVCVLVLQLDLATPRGVAMGIAYIPLIFCALWFASPHVSFVFAAFATALVT
                     IAFFGKPSNYSDPWNALFNRGLTIAALWFVAALVYLRCKSELALSESAAALKMLAVIV
                     KSSNDAIISKTLDGTICSWNVGAERLFGYSPDEMVGQSVMRLIPPALHPEEAFIISQL
                     RQGKTVEHFQTTRLRKDGSAVELSLTVSPIHDDTGQIIGASKIARDITLLRNAERELR
                     KREQRYDLALQSMSVGLWDWDIAANQLYWSARFKEILGVEDRTFMANFEEFESRLHPE
                     DRAHTLAMLDMHLRRHGSFDVECRLRRQDGNYIWIHAAGRATWDETGKPRRMVAAIDD
                     ISARKHAEEKFRTIVQFTPCAMVMVDHTGTIEVVNHEAERMFGYSEDELMGQKVEVLV
                     PERDRDRHRRHRANHFATSVESDPKVSAMAGWRELFGLRRDGSEFPIEVSLIPLRTDS
                     GIAVLSTVFDVTERNAIRDRERQFSETLEKQVAQRTAQLNAANRALNDFAYAASHDLR
                     APLRVIDNASKWLEEDLRDHLTDESRKDMTMLRGRVRRMEKLLDDLLEYARVGWTKDE
                     RHSEVVAGNELINDILALLSLSKNCTIEVSPGFADIQVCRMPLQQILMNLISNAIKHH
                     DKDEKHVAVTVEDAGASYAFAVRDDGPGIPVQFHSEIFKMFQTLKPRDEVEGSGMGLA
                     MVRKNIEIAGGTLNLESSEGKGSIFRFTLPKQQEITGAAA"
     gene            5131..6216
                     /locus_tag="VLJ17_03350"
     CDS             5131..6216
                     /locus_tag="VLJ17_03350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22045.1"
                     /translation="MSRIACRIALIGFIAAALLHPAQAEPPKFQVDPSWPQPLPSNWI
                     IGTIGGIFVDAQDHVWINQRPSSLDAREKRASTATNVICCVPAPPVIEFDQDGKVVQG
                     WGGDGPDYKWGNDGHGIFVDHNNFVWVADNVETGGHVYKFTRDGKFVMRLGKPGTPGG
                     SNDVEHFNRPADMAVDRETNEIFVADGYANHRVIVFDAATGAYKRHWGAYGKPPTDEK
                     VTFDPKGQPPQQFGNPVHCITITNDGLVLVCDRSHNRMQMFRKDGTFVREISVLKESA
                     PGTIGSIAKWPDANETYLLVVDDPNGQFHVINRTDGDLMASYGRVGHQVGEFYNLHFI
                     GIDRKGNVYSAEVQGKRVQKFRNLSGL"
BASE COUNT         1246 a         1940 c         1840 g         1250 t
ORIGIN      
        1 tctggtagcc agaatggacg acaaccaaag acggcgtttc atcacttaca tcagggagat
       61 ttacgaataa ccgtcagtca aatgagccgt cggccacagc tcacatgctt tcggtccgct
      121 tcagtggcgg ccacgcctgc aacccggtgg cgctcgccct cgacctctcc ccgacgggag
      181 aggtgaagag gcagacgctc gccaacaaga acaacggtcg cgctgcggtc aatgccggct
      241 ccatacccct tatcctgtcc cccgcagcgt gaagaaaaac gtactacctt cgcccatcac
      301 ggattcgcag cggatggtgc cgccgtgacg ctcgacgatc ttcttgcaag tcgccagccc
      361 aagcccgcta ccctcatatc tgccggcgcc gtccaagcgt ttgaacggct cgaacacctc
      421 ctggtaatat tgctcgggta tgccgatgcc gttgtccttc accgaaagca gccattctcc
      481 gcctcgctgc gcggccgccg cgatgtggac ggaggggcat tgtgcttcgc aatacttgat
      541 accattgccg atcaaattct gcagcagctg caccaattga ggcgcatggc cggtgaccgc
      601 cggcaatggg tcctgcgtca cgagcgcgcc gcgttcgtcg atgaccggcc gcaggttgga
      661 cagcaccccc ttgagaacac cactcatctc caccggctca aattcaattt gtgtgtctgc
      721 cttcgtgtat tggtgcaagg tatcgatcaa agcatccatg cgctgtgacg ctttgacgat
      781 gcgccggcag tgcgcggtgc cctgctccga ttttccctcg gcaatgctct tttccgcaaa
      841 tgccgcaaag ctttgaatgg cggtgatcgg cgctttgaga tcatgcacca acacccgggc
      901 gaaattttcc agctcctgct gctgctcagc cagtttgcgc cgcagggccg ccttctccat
      961 ggcattctcg atgccgcgct tgatcgactc ggcgtgaatg gtgcccttcg gcatatagtc
     1021 cgtggcaccc cgtttcatcg cctcggttgc gaccaattca tcaccttggc cggttcccat
     1081 gatgatcggc atatagggat tgagccgatg caatgcggcg atgccttcca ggccgttgca
     1141 cgaaggcatc cgatagtcga cgatggcgca atcgaaggcg cgttgaccgc acacttccat
     1201 tgctttttcg acgcttaccg cctcgacgca gttgtacgat agcccggcct gattgagcgc
     1261 acgcctgagc agcctgcggt cgccgtcgtc gtcatccacg atcaaaatgc tcagcatggc
     1321 acgtctttca gcttggaggc atttccacga tgcgccagta ggccccgatc agcgtaacca
     1381 gattcacaaa atcctcgccc gcagtctgct tggtgatata accggcgaca ttgagattgt
     1441 aggcggcgat cttgtcctcg tcccgcttgg acgtcgtgag catgaaaacg atgcttcgcc
     1501 ggagtttttc atcctgacgc aaagcttcta cgagttggat gccgttcatc ctcggcatgt
     1561 tcaagtccac cagcatcaca tagggggacc gcagcggcgc cctgccgttc tgccctttca
     1621 gggcttccag ccccgcgata ccgtcaacca cccgcgtaat cggattggcg atcttggccc
     1681 tgacaaaggc ccgctcgatt gccctggcat cgccatcgtc gtcctccacc agcagaatgg
     1741 tgagcggttg tcctgatcca tttgtcactg tcatcaagct gctgctcccg taatttcctg
     1801 ctgtttcggc aaggtgaagc ggaaaatgct tcccttgcct tcagacgatt cgaggttgag
     1861 cgtgccgccg gcgatctcga tgttcttgcg caccatggcg aggcccatgc cgctgccttc
     1921 cacttcgtct ctaggtttga gggtttggaa catcttgaag atttcgctgt gaaattgcac
     1981 cggaatgcct gggccgtcgt ccctcaccgc gaaagcgtag gacgccccgg cgtcctcgac
     2041 cgtcacggcg acgtgcttct cgtccttgtc gtgatgcttg atggcattgc tgatgaggtt
     2101 catgaggatc tgctgcagcg gcatgcggca cacctggata tcggcgaagc cggggctcac
     2161 ctcaatggtg cagtttttcg acagcgatag cagggccaga atgtcgttta tcagctcatt
     2221 gccggcaaca acttcggaat gacgttcgtc cttggtccac ccgacacggg catattccaa
     2281 cagatcgtcg agcagcttct ccatgcgtcg gacccgcccg cgcagcatgg tcatgtcctt
     2341 gcgcgattcg tcggtcagat gatcgcgtaa atcctcttcc aaccacttgg acgcattgtc
     2401 gatgacgcgc agtggcgcgc gcaaatcatg cgacgccgca taggcgaaat cgttgagcgc
     2461 gcggttggcg gcgttgagct gcgcggtgcg ctgggcgacc tgcttctcca acgtctcgct
     2521 gaactggcgc tcccggtcgc ggattgcgtt gcgttcggtg acgtcgaaga ccgtgctaag
     2581 caccgctatc ccgctgtcgg tgcgcagtgg aatcaagctg acctcgatgg gaaattcgct
     2641 gccgtcacgg cgcagtccga ataactcgcg ccaccccgcc atggccgata ctttcggatc
     2701 gctctccaca gaggtggcaa aatgattggc gcggtggcgt cgatgcctat cacggtcgcg
     2761 ctccggcacc agcacctcca ccttctgccc catgagctcg tcttcactgt agccgaacat
     2821 gcgctcagcc tcgtggttga ccacctcgat cgtgcccgtg tggtcgacca tcaccatggc
     2881 gcacggcgtg aattgaacga tggtgcggaa tttctcttcc gcgtgctttc gtgcgctgat
     2941 gtcgtcaatc gccgccacca tccgccgtgg cttgccggtc tcgtcccacg tcgcccgtcc
     3001 ggcagcatgg atccagatat agtttccgtc ctgccggcgc aggcgacact ccacatcaaa
     3061 ggacccatgt ctgcgcaggt gcatgtcgag catcgcaaga gtatgggccc ggtcctccgg
     3121 atgaaggcgc gattcgaact cctcgaaatt cgccatgaag gtgcggtcct cgacgccgag
     3181 gatctccttg aagcgtgccg accaatagag ctggttagcg gcgatgtccc aatcccacaa
     3241 ccccacgctc atgctctgca gggcgaggtc atagcgctgt tcccgcttgc gcagctcgcg
     3301 ctccgcgttc ctcagcaggg taatgtcacg cgcgatcttg gacgcgccga tgatttgtcc
     3361 ggtgtcatcg tggatgggcg agaccgtgag cgagagctcg accgccgagc catccttgcg
     3421 caggcgggtg gtttggaagt gttcgacggt tttgccctgt cgcaactggc tgatgataaa
     3481 cgcttcttcg gggtgcagtg ccggcgggat gagccgcatc acggattggc cgaccatctc
     3541 gtcgggggag tatccgaaca atcgctcggc gccgacattc catgagcaga tggtgccgtc
     3601 gagtgttttg ctaatgatgg cgtcgttgga cgatttgacg atgaccgcga gcatcttcag
     3661 cgcagctgcg gattcgctca aagcaagttc gctcttgcac cgcaggtaga cgagtgcggc
     3721 gacgaaccac agcgcggcga tcgtgaggcc gcggttgaac aacgcgttcc aggggtcgct
     3781 atagttgctt ggcttgccaa aaaacgcgat cgttaccaga gcggtggcga atgcggcaaa
     3841 aacgaacgac acgtgcgggc tggcgaacca cagcgcgcag aagatgagcg ggatataagc
     3901 gatgcccatg gccacgccgc gcggcgtagc gaggtcgagc tgcagaacca ggacacatac
     3961 aaagcagggc acccatagcg gaatatgcgc gatgcctggg cgcgaccggc gccattccac
     4021 ggccagcagc ccgacgctca ccgccaccag gcccaccgcc gtctgcggcg acatgtgcgc
     4081 atagctcgac cagctgtaag cgaattcgtt accttggaga tgccccaccg ccgcggtggc
     4141 cgcgaggctg aatatcagca ggcccaagag ttgaagtgcc acaacgccga taatgcccca
     4201 ctggcgattg tccgcaatca gcaacaggtg caggccggca caagcgaatg cgagcgcagt
     4261 cgcagctgac atgcggccgg gatgcaatgc ggcggggtcg gaaaaatccc tcatcaacag
     4321 ttgatcgatg cccagatcaa ggctcgtgac gtattccacc aatgtggttg cgctgacaac
     4381 cagcaagagg cccgcggcag ccagcgtcca ggtcttctga ttgcgcaggg cagcggcaag
     4441 gccgatgccg caactgcaga atgccagcgc tgtgttgaat tttatatcga agaagccggg
     4501 ccacagggcg ccgaccttag tgcctcccac aacccagacc gtctccatgg cggcaccaag
     4561 caccaggacg aagcatgccg aaccgactgc gatgcggttc catgtcgcgt gctgccccat
     4621 aagcgcttca ggcggcatga ggagcctccg ctgcatggag atcaacggtg cgaggggagc
     4681 gacgttgcat aggggtgccg gacgatagcg ttagcgcgcg gtgctgccgg cttgtgagtt
     4741 aaacgcattc gagttaacga gttcccaatg atgtattcgc agcgggtttc gcactgatgg
     4801 agatcaaatg gccgctgggt gtcatccccc gaaagcgggg aaccacggtg atgccgtgga
     4861 gctggattgc cgctttcgcg ggaatgaaac aggagagttg gtcaagattg acgtgaagcc
     4921 gcaacgctcg ataacattac gtatgccgaa agcgacgcgc ttgcttacct ctccccgctg
     4981 ggagaggtaa acggcgagcg gaacgagacg gcgggtgagg gcacttccga tcatggcgag
     5041 cgcgacaact cctcacccga attccttgct gcgctcggaa tccgacctct ccaaccggga
     5101 gaggtaaaga ccagttccag ggaggcacaa atgtcgcgca tcgcatgcag gattgctttg
     5161 atcggtttca tcgctgccgc tctgctgcac ccggcccagg cggagccgcc taaattccag
     5221 gtcgacccga gctggccaca gccgctgccg agcaactgga tcatcggcac catcgggggc
     5281 atcttcgtcg atgcacaaga ccatgtctgg atcaaccagc gcccaagctc gctcgatgcc
     5341 cgtgagaagc gcgcgtcgac ggcgaccaac gtgatctgct gcgtgccggc gccgccggtg
     5401 atcgagttcg accaggacgg caaggtggtg caaggctggg gcggcgatgg ccccgattac
     5461 aagtggggca acgacggaca cggcatcttc gtcgaccaca acaatttcgt ctgggtcgcc
     5521 gacaacgtcg agactggcgg gcacgtttac aagttcaccc gcgacggcaa gttcgtcatg
     5581 cggctgggca aacccggcac gcccggcggg tcgaacgacg tcgagcactt caaccgcccg
     5641 gccgacatgg cggtcgatcg cgagaccaac gagatttttg ttgccgacgg ctacgccaac
     5701 catcgtgtca tcgtgttcga tgccgcgacc ggtgcttaca agcgccactg gggcgcctac
     5761 ggcaagccgc cgaccgatga aaaggtcact ttcgacccca agggacaacc gccccaacag
     5821 ttcggcaatc cggtgcattg catcaccatc accaacgacg ggctggtgct ggtgtgcgac
     5881 cgcagccata accgtatgca gatgttccgc aaggacggga cgttcgtgcg cgaaatctca
     5941 gtcctcaaag agagcgcccc cggcaccatc ggctcgatcg caaagtggcc ggacgcgaac
     6001 gagacctatc tcctggtggt cgacgacccc aacggccagt tccatgtcat taatcgcacc
     6061 gatggtgatc tgatggcatc ctacggtcgc gtcggccatc aggtcggcga gttctataac
     6121 ctccatttca ttggcatcga ccgcaagggt aatgtctaca gcgccgaggt gcagggcaag
     6181 cgtgtgcaga aattccgcaa tctcagcggg ctgtgacggc ttcacctctc ccctgcgggg
     6241 gagaggtgaa gcccatgcgt caactcatcc gaatac
//
LOCUS       DATILV010000150         4241 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2590600, whole genome shotgun sequence.
ACCESSION   DATILV010000150 DATILV010000000
VERSION     DATILV010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4241
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2590600"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..709
                     /locus_tag="VLJ17_03355"
     CDS             <1..709
                     /locus_tag="VLJ17_03355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008139681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DapH/DapD/GlmU-related protein"
                     /protein_id="HSV22046.1"
                     /translation="AVALEAEEDEVRGVNTQGQLAEAEAVLQRRLRAAAHEAGVTIVA
                     PETVYLCADTKLGRDVTIEPYVVFGPGVTVEDGALIRSFSHLEGAHVGRGARVGPFAR
                     LRPGANLEVDVHVGNFVEVKEARLEAGAKANHLAYIGDARVGAGANIGAGTITCNYDG
                     FKKHVTEIGREAFIGSNSALVAPVKIGDGTYVASGSVITRDVPANSLAFGRARQVIKE
                     GLATQLRAVLRAGKNKS"
     gene            1804..2760
                     /locus_tag="VLJ17_03360"
     CDS             1804..2760
                     /locus_tag="VLJ17_03360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22047.1"
                     /translation="MIDAIKAGQVNLDDPAVTVQLLKLNAVVGVIGKVVAPNDTLATI
                     GITCALCHSTVDNAVAPGIGRRLDGWPNRTLNAGAIIALSPAVINKTPFQSWGPGKFD
                     PRLEYFDGKNIVSLNSPTIPVVIPPAFGLKGVGFETYTGDGPISYWNNYVGAMEMGGH
                     GSFSDPRIGISVTQTPDLVTPKLPALLQYQLGLKAPPPPEGSFNEKAARRGEEVFNGA
                     GRCARCHKPPLLTDVLSGPNPRVPFLHSPFEIGTEPVYASRSATKMYRTTPLRALWQH
                     PPYFHDGSAPDLLAVVNHYNTVFQLGLRDREKTDLVEYLKTL"
     gene            complement(3326..>4241)
                     /locus_tag="VLJ17_03365"
     CDS             complement(3326..>4241)
                     /locus_tag="VLJ17_03365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013895497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSV22048.1"
                     /translation="NVAGIDIRSRKVMLAEGSNIGYDRLLLATGAEPVRLSIPGAAAQ
                     QLLMLRSLADSRAIIERAKTARRAVVLGASFIGLEVAASLRARHIEVHVVAPEKRPME
                     RILGPQIGDFVRALHEEHGVVFHLEDTAASIDGNRVVLKSGGTLDAELVVAGVGVRPR
                     TELAEQAGLRLDRGVIVDAYLETSAPGIFAAGDIARWPDPHSGENIRVEHWVVAERHG
                     QTAALNMLGRREKFAAVPFFWSQHYDVPINYVGHAEKWDELTVDGDVMAKDCLVRYKR
                     NGRVLAVASIYRDVESLEAEVEMEREVA"
BASE COUNT          848 a         1342 c         1250 g          801 t
ORIGIN      
        1 cgcagtggca ctggaagccg aggaagacga ggtgcgtggt gtgaacacac aaggtcagct
       61 ggccgaggcc gaggccgtcc tgcagcgccg cctgcgggcg gctgcccatg aggcgggtgt
      121 caccatcgtg gcgcccgaga ccgtctatct gtgcgccgac accaagctcg gccgcgacgt
      181 caccatcgag ccttatgtgg tgttcggacc cggtgtgacg gtcgaggacg gcgcactgat
      241 ccgctcgttt tctcatctcg aaggcgccca tgtaggacgc ggcgcgcggg tcgggccgtt
      301 cgcccggctc cggccgggcg caaaccttga ggttgacgtc cacgtgggca attttgtcga
      361 ggtgaaggag gcgcgcctcg aagccggcgc caaggccaac cacctcgcct acatcggcga
      421 cgcgcgcgtc ggcgcaggag ccaatatcgg ggccggaacc atcacgtgca attacgacgg
      481 cttcaaaaaa cacgtcactg agattgggag ggaagccttc atcggctcca attcggccct
      541 ggttgcaccg gtcaagatcg gcgatggtac ctatgtggct tcgggctccg tgattacccg
      601 cgacgtgccg gcgaattcgc tcgctttcgg ccgggcacga caggttatta aggagggctt
      661 ggcgacgcag ctgcgcgccg tcctgcgcgc cggcaagaac aagtcgtgaa gggcggcatt
      721 cttctgcttc ttcccttgca gccctggcgc agctggccag caaacatccc tcgagcccag
      781 cgaacaggcg cgggcagcac aatggcgccc ccttgagccg cccgtcggga gcaagaagcc
      841 gtccgccaga acctttcacg gcaaggaatc caggtctatt tcgagcagga ggtttcgagc
      901 gagaacttgg tgtcccagct tgcgctcttt cggcgcgttt tgacgcttct cttgcgtttg
      961 ttggcgcgca cgagaccgag gcgatgtggc ctcccgccac ccaacccgca aaacagcgcc
     1021 cgaacaggat cggatcgacc cggttgacga gcttgcgcag cccagcgttc acacgcaatg
     1081 cagtgatgga actccgcgaa cctgcgtaag aaatcgaggt gctgcctgcc ccaggcgcaa
     1141 atatcgtcga aatcgtcaca agacgcgatc atcgcacaga cgaccagcag caacactttc
     1201 ttgagcgggt acccggttat ccccaagcgc ggaaaaatgc tccagcagaa cgggccgcgc
     1261 gtgcccgcgg gacctcatcg tccaggtagc cgtgaaggcg atcatgtttg cgctccatcc
     1321 ccgatcaaag cgcgcacgca atcatagccc gcccgtctat acaaaatttg ccccaagcgc
     1381 ccgttacccc tgagtttcct gccatgggga acctttctcg gcatcgtgca tctaatcgtt
     1441 gcgtgcgggc gctcgatacc gcgcgtgatc ccagcccccg cataaccggt aaatgagggg
     1501 ctgggatctt ttaggatcac agggaaaggg gaggcatgag gaggagctat gtcccgattc
     1561 atattttcat cggtagccgt atcggtggcg atcctgtgtt ttaccccttt gccagggcag
     1621 tcacagagtc aagggcagtc gcagagtagt gccgacggaa aatcgatctt tcggttcgat
     1681 acctatggtg acgaacagct ttggaccgat gtgctgcagc tgcaaaatgt catcaagaac
     1741 gtaagcccgc ggacggcttt atcggtcggg ctgaaagtcg actcggatgc gcttcctaag
     1801 gcggtgatcg acgccatcaa ggcgggtcag gtgaatctcg acgatcccgc ggtgacggtc
     1861 caattgctga aactcaatgc cgtcgtcggc gtgattggaa aagtggtggc accaaatgac
     1921 acgcttgcga caattggcat tacctgcgcg ctctgtcatt caacagtcga taacgccgtc
     1981 gcgccgggga tcggcaggcg tctcgatggt tggcccaacc gcacactgaa cgcgggcgca
     2041 atcatcgcgc tgtcgcccgc cgtcatcaac aaaaccccat ttcaaagctg gggtcccggc
     2101 aagttcgacc cgcgtcttga atacttcgat ggcaagaaca tcgtctccct gaacagcccc
     2161 acgatccccg tcgtcattcc acccgccttc ggattaaaag gcgtcggttt tgagacgtac
     2221 accggcgatg gcccgatttc ctactggaac aactatgtgg gcgcgatgga gatgggcggg
     2281 catggcagct tcagcgatcc tcggattggg atcagcgtca cgcagacccc cgatttagtg
     2341 acgcccaagc ttcctgcgtt gttacagtat cagctcggtc tgaaggcgcc cccaccgccc
     2401 gaaggcagtt tcaatgagaa ggcggcgcga cgcggcgagg aggtattcaa cggtgccggt
     2461 aggtgcgcac gatgccacaa accgccgctg ctcaccgatg tgctgagcgg acctaatccc
     2521 cgcgtgccgt tcttgcactc acccttcgaa ataggaaccg agccagtata cgcgtcgcgc
     2581 agcgccacca agatgtaccg tacgaccccg ctgcgcgcgc tctggcagca tccgccgtac
     2641 tttcacgatg gcagcgcccc cgatctgctc gccgtggtca atcattacaa tacggtgttt
     2701 cagctcggcc tgcgcgatag ggagaagact gacctcgtcg aatatctgaa aacgttatag
     2761 aggcgccgcg tgcggaactt tccgactcct cgatggccgg accagtcccg gccaccgggg
     2821 agatcaacgg gatcgccgcc gggcccaaaa cgtccactcc agcgtcgctt ccgccttgag
     2881 gctttcgatc cccgtagatc gagacgaccg ccctaccgac tctttccata aggccgttgt
     2941 acaatggtta cgacagcctt gctctacgat ccgtgatcac atcgatcggg cggtggatca
     3001 tttctctcgt tctggacgtt ttactgagct cctttcggcc attgtacatt gtggtgccgt
     3061 gcagctcgat ctcgtgtgct tcatcgaggc ccccgctaca actcgatcaa gagcagtgat
     3121 taaatggtat aagcgcctcg caaagatggt tatgcccgca agcgcaaaat agttttcctt
     3181 cgaattgcct gccgaaccag aaccgtccac gtaaaagaca tgcatggcgc gcgcctcccg
     3241 cgcgtgaaaa tgtaggtcaa agaagtagat caaagaaaat gcagccgagt ggaccggcca
     3301 agcctgttct accgcgaggc cactcctacg ccacctcccg ctccatctcc acttccgcct
     3361 cgagactctc gacatcgcga tagatcgaag cgaccgcgag cacgcggccg ttgcgcttgt
     3421 atcgtaccaa gcagtccttc gccatgacgt caccgtcgac cgtcagctcg tcccattttt
     3481 cggcgtggcc gacatagttg atggggacat catagtgctg actccagaag aagggcacgg
     3541 cggcgaactt ctcgcgccgt cccagcatgt tgagcgcggc ggtctggccg tggcgctcag
     3601 cgacgaccca gtgctcgaca cggatattct cgccactgtg cggatcgggc caacgcgcaa
     3661 tgtcgcccgc cgcgaaaatg ccaggtgcgc tggtttccag ataggcatcc acgattaccc
     3721 cgcggtcgag cctgaggccg gcttgttcgg caagttcggt gcgcgggcgc acgccgacac
     3781 cggcgaccac gagctcggca tcaagcgtgc cgccgctttt caacaccacc cgattgccgt
     3841 cgatggaggc ggccgtgtct tcgaggtgga agaccacgcc gtgctcctcg tgcagggcgc
     3901 gcacgaaatc gccgatctgc gggccgagaa tacgctccat cggccgcttt tccggcgcca
     3961 ccacgtgaac ctcgatgtgg cgggcgcgca gcgaggccgc aacctcaagc ccgatgaagc
     4021 tcgcacccag cacaaccgcc cgacgggcag tcttggcgcg ctcgattatg gcgcggctgt
     4081 ccgccagcga tcgcagcatc aatagctgtt gggcggccgc acccggaatc gacagccgga
     4141 ccggctcggc gcccgtcgcg agcaacagcc ggtcgtaacc gatgttgctc ccttcggcga
     4201 gcatgacttt gcgcgaacgg atgtcgatcc cggcaacgtt c
//
LOCUS       DATILV010000151         2862 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_802644, whole genome shotgun sequence.
ACCESSION   DATILV010000151 DATILV010000000
VERSION     DATILV010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2862
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_802644"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1004)
                     /gene="plsX"
                     /locus_tag="VLJ17_03370"
     CDS             complement(<1..1004)
                     /gene="plsX"
                     /locus_tag="VLJ17_03370"
                     /EC_number="2.3.1.274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043811 - phosphate:acyl-[acyl carrier
                     protein] acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HSV22049.1"
                     /translation="MPHKVRIALDAMGGDYGPPVVTAGADISLDRHPDTEFVIVGNRA
                     VLEPLLANRPRLRAVSRIIHTDVAVKMDDKPSQALRRGRWKSSMWVAIDAVKKGDADV
                     AISAGNTGALMAMAKFHLKTTAGIDRPAIAALWPTLRGESIVLDVGATIGADTKHLVD
                     LAVMGGAMARVLFDLERPTVGLLNIGVEEAKGLEEVRQAGLILRETRRPDLDYVGFVE
                     GDDIGKGTVDVVVTEGFAGNIALKTAEGTAKQLGEYLRNAMSRTLFAKLGYLLARNAF
                     AALKEKMDPRKVNGGVFLGLNGVVIKSHGGTDAEGFAAAVDLGYDMARYELQAKISQT
                     "
     gene            complement(1163..1681)
                     /locus_tag="VLJ17_03375"
     CDS             complement(1163..1681)
                     /locus_tag="VLJ17_03375"
                     /inference="COORDINATES: protein motif:HMM:NF014657.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HSV22050.1"
                     /translation="MTEPAQPWHVPVRLEDVPETGLHLDLVADAQVRAGVAALAGVRD
                     VPRLEAAVDLARQGMSLRVTGRVCATIGQTCVVTLEPMENLVDEPIDVTFASCPTGDV
                     ADHNAAFEAGDPPEVLSDGTADLGAVATEFLLLGIDRYPRKPGVKFAPPLEESAGASP
                     FAVLAKLKDARN"
     gene            2060..2458
                     /gene="bamE"
                     /locus_tag="VLJ17_03380"
     CDS             2060..2458
                     /gene="bamE"
                     /locus_tag="VLJ17_03380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HSV22051.1"
                     /translation="MGAAVLTGAFVGGCAQVYHHGYMVPEGALEQLPLGSSQDQVLIV
                     LGTPSTVATISGEVFYYISQRAEQISFLPQKEVDRRVIAVYFDKNRKVQRLADYGLKD
                     GKIFDYISRTTPSGGAEQNYLGLVFHIVKS"
     gene            complement(2455..>2862)
                     /locus_tag="VLJ17_03385"
     CDS             complement(2455..>2862)
                     /locus_tag="VLJ17_03385"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV22052.1"
                     /translation="GGGTFPYLSTRLRLMDELENRRPPFPRFGAGRPFQERFPEGVRP
                     WLGRFYYDVALCGGGPPMAALTELAGPMRILYGSDWPFVKRDFVVDQLDDLMSMRHFA
                     GEAFGAMARGNAQLLFGRFASPFHTRKLTDGSG"
BASE COUNT          578 a          903 c          848 g          533 t
ORIGIN      
        1 aaggtctgcg aaatctttgc ctgcagctcg taacgggcca tatcgtagcc gagatcgacc
       61 gcagcggcga agccttcggc atcggtaccg ccatggctct tgatgacgac gccgttgagg
      121 ccgaggaaca ccccgccatt gaccttgcgt ggatccatct tttccttcaa tgccgcgaac
      181 gcattgcggg cgagcaggta gccgagtttg gcgaacaagg tccggctcat ggcgttgcgc
      241 aaatattcgc caagctgttt ggcggttcct tcggcagttt tcaaggcgat attgccggcg
      301 aagccctcgg tgaccacaac atccaccgtc cctttgccga tatcgtcgcc ttccacaaag
      361 cccacatagt cgagatccgg cctcctcgtt tcgcgcaaga tgaggccggc ctggcggacc
      421 tcttcgagac ccttggcctc ctcgaccccg atattgagga gcccgaccgt cggccgctca
      481 agatcgaaca gcacccgggc catagcgccg cccatgacgg cgagatcgac aagatgcttg
      541 gtatctgccc cgatcgtggc tccgacatcg agaacgatcg attcgccccg tagcgtcggc
      601 cacaaggccg cgatcgccgg ccgatcgatg cctgccgtgg tcttgagatg gaatttcgcc
      661 atcgccatca aggcaccggt attgccggcc gagattgcga cgtccgcatc acccttcttg
      721 accgcatcga tcgccaccca catggacgat ttccagcggc cgcggcgcaa cgcctggctg
      781 ggtttatcgt ccatcttgac cgcaacatcg gtatggatga tgcgcgagac agcgcgcagc
      841 ctcggccgat tcgccagcaa cggttcgagc accgcccgat taccgacgat gacaaattcg
      901 gtgtccggat gccgatcgag agaaatgtcg gcgcccgccg tcacaactgg ggggccgtaa
      961 tcgcctccca tggcgtcgag agcaatgcgt actttgtgtg gcatcgatcg accttggcgg
     1021 ggccagcgcc agatttcggt tccgccgacc gggtgcccgt ttgaagcgcg ggaccatagc
     1081 gtgtcagatt gtcaggggcc agtggttaga agccaccacc gagactgcga gggtttgagg
     1141 tgacggcttt tcgaacggac catcaatttc tcgcatcctt gagtttggcc agtaccgcaa
     1201 acggactcgc cccggcgctt tcctcgagtg gcggcgcaaa cttcacaccc ggcttgcggg
     1261 gatagcgatc gatgccaagg agcagaaatt cggtggcgac agcgccgaga tcggccgtcc
     1321 catccgatag aacctccggc ggatcgccag cttcgaaagc cgcgttgtgg tccgccacat
     1381 cgcctgtcgg gcaagacgca aaggtcacgt cgattggttc atctaccaga ttctccatcg
     1441 gttcgagcgt gaccacgcag gtttgtccga tcgtcgcgca aacgcggccg gtcacccgca
     1501 agctcatgcc ttggcgcgcg agatcgacgg ctgcctcaag tcggggcacg tcgcgcaccc
     1561 ccgcaagtgc ggcaacaccg gcacgcactt gggcatcggc gacaagatcg agatgcagcc
     1621 cggtttccgg gacatcctca agccggaccg ggacgtgcca cggctgcgca ggctcggtca
     1681 tgggaacgat taccctcgtt tcgcgaaaag gatcagcatc ggccaaaatg gcgtccgaac
     1741 caaaaaatgc aagccgccgc acgccgaagc ggccgtgtct tatcgacctt cgaggatatc
     1801 ggtgaatgcc aaggatcggt gccgaagacg ggcaagcgca ccctgcgcca cgatggcgcc
     1861 atagaggccc tcgaatgtgg acatggcgca ctgccgaaat gggcgtagaa tcatggggtt
     1921 cgggtgcggc gcgcacaccc gttgtaattt gtgtgggtgc gcgttaggtc atctgaactc
     1981 atagacgtat gggagatgcc agaagttgag tgaggttaac gatttcaagg ctcgtttcaa
     2041 cgtctggcgg tcgttcgccg tgggcgcagc ggtgctgacc ggcgctttcg ttggcggttg
     2101 cgcccaggtc taccatcacg gttacatggt tccggaaggg gcgctggagc aacttccgct
     2161 cggctcctcc caggatcaag ttttgatcgt gctcggcacg ccatcgacgg tcgccaccat
     2221 cagcggcgag gtgttctact atatttcgca acgcgccgag caaatctcgt ttctgcctca
     2281 gaaagaagtc gaccgtcgcg tcatcgcggt ctatttcgac aagaaccgca aagtgcagcg
     2341 gctcgccgat tacggcctca aggacggcaa aatcttcgac tacatcagtc gcaccacgcc
     2401 gtccggcggc gccgagcaga actatctggg tctcgtgttc cacatcgtga agagctagcc
     2461 cgaaccgtcc gttaatttcc gcgtatggaa cgggctggcg aagcgaccaa acagcaactg
     2521 cgcattgcca cgcgccatgg cgccgaacgc ttccccggcg aaatgccgca tgctcatgag
     2581 atcgtcgagt tgatcgacca caaagtcacg cttcacgaac ggccaatcgc tgccataaag
     2641 aattcgcatg gggccagcga gttccgtgag cgccgccatc ggcggcccgc cgccgcacag
     2701 cgccacatcg tagtaaaacc gaccgagcca tggtcgcacg ccctcgggaa accgctcttg
     2761 aaacggccgc ccggcgccga acctcggaaa cggcggccga cggttttcga gctcgtccat
     2821 caaccgcaga cgcgtcgaaa gatacggaaa ggttccgccc cc
//
LOCUS       DATILV010000152         3702 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4635675, whole genome shotgun sequence.
ACCESSION   DATILV010000152 DATILV010000000
VERSION     DATILV010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3702)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3702)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3702
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4635675"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            28..1560
                     /gene="atpA"
                     /locus_tag="VLJ17_03390"
     CDS             28..1560
                     /gene="atpA"
                     /locus_tag="VLJ17_03390"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF009884.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HSV22053.1"
                     /translation="MANLLREIEAQIAGVKTTTAKQNVGVIREIGDGVAKVEGLTDAM
                     LNEMIDLGHGITGLALNLEETEVGVIILGDYTQLEEGGEARTTGKLLQTPVGKGLLGR
                     VVNTLGEPIDGKGPIQSSVAYPVEKLAPGIIRRQSVNQPVQTGIMAIDAMIPIGRGQR
                     ELIIGDRSTGKTTICVDTIINQARLNKAAEAAGDKSHRPLYCIYVAIGQKQSSIARVI
                     SVLEEAGAMPYTIIVASPAADSATNQYLAPFAGAAMGEWFMDNGMDALIVFDDLSKHA
                     VAYRQVSLVLKRPSGREAYPGDVFYLHSRLLERAARVGEKYGNGSLTALPIIETQAGD
                     VSAYIPTNVISITDGQIYLETDLFYQGVRPAISVGLSVSRVGSAAQLKAVKQVAGELK
                     GDLAQFRELAAFAQFGSELDAKTQAKIDGGKRIIEIFKQPQYSPIPVALQVAVIWTVQ
                     NGYVNDVPVERVKEFQNRLTEYLSMRKTELLRKIENEKALTDALAAELKAAADEFKQT
                     WK"
     gene            1576..2442
                     /gene="atpG"
                     /locus_tag="VLJ17_03395"
     CDS             1576..2442
                     /gene="atpG"
                     /locus_tag="VLJ17_03395"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit gamma"
                     /protein_id="HSV22054.1"
                     /translation="MHSIRDLRRRIRSISSTAQITKAMQMVAGSKMRKAQQAALAGRP
                     FAYLLYRIQREATTRMGEFTHPLLEVRDVRKKAVILIGADKGLCGALNTNLFRVASQF
                     DPQSTVFITAGRKAAQFVAHSGRRLAAEFEYADTPQFSEASAIAAFARDLFLKGEVDQ
                     VEIVATRFVNTLTQHPITIDFLPVGEIKTLQFPGMESEKELAEDNNESLFEPNPEAVL
                     GYMLSHYLNFYIYQVLLNAKASEQSARMVSMKNATDSADHLIRDLSLEYNKQRQGNIT
                     KELLEIAGGQAE"
     gene            2477..>3702
                     /gene="atpD"
                     /locus_tag="VLJ17_03400"
     CDS             2477..>3702
                     /gene="atpD"
                     /locus_tag="VLJ17_03400"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004280997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HSV22055.1"
                     /translation="MNIGKIVKVAGPVVDVEFPAALPGIYHALTVEYKLQNQPAKLTL
                     EVQQHLGDKLVRAISMAGTEGLKRGFDVTDSGGPISMPVGEGVMGRIFDVTGNPVDER
                     GPVKAEKYYPIHRTPPPLVDQSTSPQVLATGIKVLDLICPFLKGGKVGAFGGAGVGKT
                     VVIMELIHNIAKLHGGVSVFAGVGERTREGNDLYHDMSDSGVIKQDNLGESKIALVYG
                     QMNEPPGARLRVALSALAMTEYFRDEKNQDVLLFIDNIFRFSQAGSEVSALLGRTASA
                     VGYQPTLAAEMGALQERITSTKKGSITSFQAVYVPADDLTDPAPATTFAHLDATIVLE
                     RAIAELGIYPAVDPLASTSRALAPEIVGQEHYDVARGVQKVLQRYKDLQDIIAILGMD
                     EISPEDKLTVFRARKI"
BASE COUNT          868 a         1012 c         1060 g          762 t
ORIGIN      
        1 ggaaaaagag tttgaactaa ggtaactatg gcaaaccttc taagagaaat tgaagcgcaa
       61 atagcgggcg taaagacgac gactgcgaaa caaaacgtag gcgtcatccg cgagattggc
      121 gacggcgttg ccaaggtcga aggcctgacc gatgccatgc ttaacgagat gatcgacctc
      181 ggtcacggca tcactggcct agcgctgaac ctggaggaga ccgaggtcgg cgtaatcatc
      241 ctgggcgatt acactcaact cgaagagggc ggtgaggctc gcaccaccgg caagcttctg
      301 cagacgcccg tcggcaaggg tctgctggga cgcgtggtga atacgttagg cgaacctatc
      361 gatggcaaag ggcccattca aagtagcgtc gcctatccgg tcgagaagct ggcgcccgga
      421 atcattcgcc gccaatcggt caaccagccg gtgcagaccg gcattatggc aattgatgca
      481 atgattccga ttggccgcgg ccagcgggaa ctgatcatcg gcgatcggtc gaccggcaag
      541 acaaccatct gtgtcgacac catcatcaac caggcgcgtc tcaacaaggc cgctgaagct
      601 gccggcgaca agtcgcatcg ccccctgtat tgcatttacg tagcgattgg tcagaagcaa
      661 tccagcattg cccgcgtcat ctcggtgctc gaggaggcgg gggcgatgcc gtacacgatc
      721 atcgttgcat ctcctgccgc cgactcggcc acgaatcagt atttggctcc attcgctgga
      781 gcggcgatgg gcgagtggtt tatggacaac ggcatggatg cgttgatcgt gtttgacgat
      841 ctctccaagc atgcagtggc ttacaggcag gtgtcgctgg tgttgaagcg gccgtcgggc
      901 cgcgaagcgt atcccggcga cgtgttctat ctacatagcc ggctgcttga gcgcgcggcg
      961 cgtgttggag agaaatatgg caacggatca ctgacggctt tgccgattat tgaaacgcag
     1021 gctggcgacg tatccgctta tatccctacc aacgtcatct cgattacgga cggccagatc
     1081 tatctcgaaa cggatttgtt ctaccagggc gtccgtcccg ccatttcggt aggcctctca
     1141 gtctcccgcg ttggttccgc ggcgcagctc aaagccgtga agcaagttgc cggagagctc
     1201 aaaggcgatc tcgcccaatt tcgcgaactc gcagcgttcg cgcagttcgg ctcggaactg
     1261 gacgcgaaga cgcaggcgaa gatcgacggc ggcaagcgca tcatcgagat cttcaagcaa
     1321 cctcagtaca gcccgattcc cgttgcgctt caggtggctg tcatttggac ggtccaaaac
     1381 gggtatgtga atgatgtgcc agtggagcga gtcaaggagt tccaaaatag gctgactgag
     1441 tatctaagca tgcgcaagac tgagctactg cggaaaatcg aaaacgagaa ggcacttacg
     1501 gacgccttag cggcggagtt gaaagctgca gccgacgaat ttaagcagac atggaaatga
     1561 gcgccaactc taatcatgca tagtatccgc gatttacgcc gacgcatccg gtccatcagc
     1621 agcactgcgc aaatcaccaa ggcaatgcag atggtggcgg gatcgaaaat gcgcaaagcc
     1681 cagcaggctg cgttggccgg ccgtccattt gcgtacctgt tgtaccgcat tcagcgcgaa
     1741 gcgacgacgc gtatgggcga gttcacccat cccctgcttg aggtgcgtga cgtccgcaaa
     1801 aaagccgtta tcctcatcgg cgctgataag ggcttgtgcg gagcactcaa cacaaacttg
     1861 ttccgagtgg cctcccagtt cgatccgcaa tcaacagtct tcatcacggc cggacgcaaa
     1921 gctgcgcaat tcgttgctca cagcggccga cggcttgccg ccgagttcga gtacgctgac
     1981 acgccccagt tctccgaagc ttccgcgatt gcggcattcg cccgcgatct attcctaaaa
     2041 ggggaagtcg accaggtcga gatcgtggct acgcgattcg tcaacacact tactcaacat
     2101 ccgatcacaa tcgactttct gccagtgggc gaaatcaaga cgctgcagtt tcccggtatg
     2161 gaatcggaaa aggaattagc agaggacaat aacgagtcgc tgttcgagcc taatccagaa
     2221 gcggttctcg gttatatgct ctcgcactat ctgaactttt acatctatca ggtcttgctg
     2281 aatgcgaaag ccagtgagca aagcgcgcgc atggtgtcaa tgaagaatgc caccgatagc
     2341 gccgaccacc tgattagaga cttgtcgctt gaatacaaca agcaacggca gggcaatatc
     2401 acgaaggagt tactggaaat cgccggcggt caggctgagt gagcgaactc actgcccgtc
     2461 gcagatcggt atcaatatga acataggcaa gatcgtaaaa gttgcaggtc cggtagtgga
     2521 tgttgagttc cccgcagcat tgcctgggat ctatcacgcg ttgaccgttg aatacaaatt
     2581 gcagaaccag cccgctaagc tgacgctcga agtgcagcaa cacctcggcg ataaattggt
     2641 ccgggcaatt tccatggccg gtaccgaggg actcaaacgc ggcttcgacg tcacagatag
     2701 cggtggcccg atttccatgc ccgtcggtga aggtgtcatg ggtcggatat tcgatgtaac
     2761 cggcaatccg gtggatgagc gcgggcccgt taaggctgag aagtattatc cgatccaccg
     2821 cacgccgcca ccgcttgtgg accaatcaac ttctccgcag gtgctcgcca ctggaatcaa
     2881 agttctcgat ttgatctgtc ctttcctgaa gggcggcaaa gtcggcgcct ttggtggcgc
     2941 tggagtgggc aaaacggttg tgatcatgga gttgatacac aacatcgcga agctccatgg
     3001 aggcgtgtcg gtatttgcag gcgttggcga acgcactcgg gagggcaacg atctttacca
     3061 cgacatgtcc gactctggag ttatcaaaca ggacaacctg ggcgagtcca aaatcgcgct
     3121 ggtatacggt cagatgaacg aaccgccggg tgcgcgtctg cgcgtagcgc tttccgccct
     3181 tgctatgacc gagtactttc gcgatgagaa gaaccaggat gtgttgctct ttattgacaa
     3241 catcttccgc ttttcccaag ccggatctga ggtatcagca ctgctaggtc gcacggccag
     3301 cgccgtcggt taccagccaa ctctcgccgc tgagatgggg gcgttacaag agcggattac
     3361 ctcaacaaag aaaggctcaa tcacgtcgtt tcaggccgtg tacgttcctg ctgacgatct
     3421 gaccgacccg gcgccggcca caacctttgc acacctggac gcgaccatcg tactggagcg
     3481 tgcgattgcc gaattgggaa tctatccagc agtggatccg ttggcttcga cttctcgcgc
     3541 tctcgcacct gaaatcgtgg ggcaggagca ttatgacgtt gcccgtggcg tacagaaggt
     3601 acttcagcgc tacaaggacc tgcaggacat catcgcgatt ctgggcatgg atgaaatttc
     3661 gccggaagac aaactgacgg tctttcgtgc acgcaagatt ca
//
LOCUS       DATILV010000153         6793 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_546159, whole genome shotgun sequence.
ACCESSION   DATILV010000153 DATILV010000000
VERSION     DATILV010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6793)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6793)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6793
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_546159"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            70..1761
                     /locus_tag="VLJ17_03405"
     CDS             70..1761
                     /locus_tag="VLJ17_03405"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HSV22056.1"
                     /translation="MLGHNRRKMLGAECMADMLNGYGVTHVFHVPAVLRRSFVEMERR
                     TDIKRLHVHGEKSAAYMADGYARASGKPGICMAQVIGALNLAAGLRDAWLAHAPVIAM
                     TGGREPRTKFRKVYQEVDDMPAFEPVTKFNATVDDVARFPDMVRQAFRVAVSGTPGPV
                     HLQFRGNEGQVDAEEAEMEPLCEPQFRCVPPFRPEPDQASVLEALKVLEAAERPVIVA
                     GGGVRASNAQAEVVLFAEALQIPLATSLNGKDTIPGTHPLSVGVVGSYSRESANRVVN
                     HADLICFIGSESGGMTTHFWTVPPIGTPAIQIDINPEALGRNYPLRAAVNGDAKVTLE
                     RMLSAADRGSAGKRKAWVEAARKICAEWREKYQALLTSDAVPIRPERLCSELTQHVPD
                     DAIVVVDTGHAGMWMGGMYDLTSPRQSYMRSAGHLGWAFPAGLGAKCACPERPVVTFT
                     GDAGFWYHIGEIETAVRWHINAVTVVNNNGGGNQSKRGFDRVYGGTQTEGGRTLWTFN
                     KMNFARIAEDMGALGIRVENASAFPAALAQALTADRPAVIDVVTDIDALAPLAVS"
     gene            1834..3441
                     /locus_tag="VLJ17_03410"
     CDS             1834..3441
                     /locus_tag="VLJ17_03410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006724929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HSV22057.1"
                     /translation="MAILDSPVDAKSLEFRTNAAQMRALVDDLNRRRAEAALGGPARA
                     RERHTARGKLLPRERVLRLIDPGTPFLELSPLAANGMYEDAIHGAGLISGIGRVEGRE
                     CVIIANDATIKGGTYFPMTVKKHLRAQEIAFENRLPCIYLVDSGGANLPRQTEVFPDR
                     EHFGRIFYNQANLSAAGIAQIAAVMGSCTAGGAYVPAMSDETVIVRNQGTIFLGGPPL
                     VKAATGETVSAEDLGGAEVHTRRSGVADHYAADDNHALAICRRIVANINVSKRADVAF
                     MAPADPVRDPAELDGLVPADPRKSFDIRAVITRLVDGSVLDEFKSLYGTTLVTGFGHL
                     GGIPIGVVANNGILFSESALKGTHFIELCCQRRIPLLFLQNIAGFMVGSQYEAGGIAK
                     DGAKMVTAVACARVPKITVIVGGSHGAGNYSMCGRAFGPRFLFTWPNARISVMGGEQA
                     ASVLATVKRENIEADGGKWSEVEEEEFKQPIREQYDVEGNPYYATARLWDDGIITPAE
                     TRRVLMLAFSATLNAPIPRTRYGVFRM"
     gene            complement(3448..3834)
                     /locus_tag="VLJ17_03415"
     CDS             complement(3448..3834)
                     /locus_tag="VLJ17_03415"
                     /inference="COORDINATES: protein motif:HMM:NF013304.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HSV22058.1"
                     /translation="MSLELTLLVWSAALTFIQMLVAVSGCALQFGLPRLSGNREDLPP
                     ADGWAGRAQRAHSNMLESLVLFAVLVLVTEAANRNSAVTGLGAQLFFWARVAYAVIYL
                     AGIPWVRTAVWTVSMIGLILIFLQLI"
     gene            4057..4311
                     /locus_tag="VLJ17_03420"
     CDS             4057..4311
                     /locus_tag="VLJ17_03420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22059.1"
                     /translation="MTFKVYSSPAGTDAVSPIHKDRMLFKEFPNFDEALSWASHIKET
                     GRMAVLIEDETGRTFDKREIAAALADREARDIRGVTAHRG"
     gene            complement(4319..5005)
                     /locus_tag="VLJ17_03425"
     CDS             complement(4319..5005)
                     /locus_tag="VLJ17_03425"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HSV22060.1"
                     /translation="MRVFGSVLVAAGAVAVASAAMAQAPAGGAAYMVTYIEVLPSAQG
                     EVAGLLKQVAAASRKEAGNQRYDILQRIDRKNQFVILEAWTDLKAAEAHTGGGALKQF
                     KDKLKPMQASFYDERPSNGVAVAPSTASVGRGAIYAVTHVDVTPPNKDDCIVMLKKLA
                     DDARKEPDSLQFEAWQQNNRANHFTVAEIWKNRAAVDSHIVTASTKEFREKLGPMSGA
                     LYDERLYKSL"
     gene            complement(5119..5310)
                     /locus_tag="VLJ17_03430"
     CDS             complement(5119..5310)
                     /locus_tag="VLJ17_03430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22061.1"
                     /translation="MRFIFGLIVGVGLTIGGAAIHDNMDPGASKPLVNWTTANELQQT
                     AFDYVRSQFDRLMKWATSS"
     gene            complement(5562..5780)
                     /locus_tag="VLJ17_03435"
     CDS             complement(5562..5780)
                     /locus_tag="VLJ17_03435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur globule protein precursor"
                     /protein_id="HSV22062.1"
                     /translation="MFRKLSLAAVAAIALGTAALTPTSASAWWYGGWHPHHHGWWSGG
                     PGSYYGAYSYGCRRWVETPWGPRRRWVC"
     gene            6054..6476
                     /gene="ndk"
                     /locus_tag="VLJ17_03440"
     CDS             6054..6476
                     /gene="ndk"
                     /locus_tag="VLJ17_03440"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HSV22063.1"
                     /translation="MAIERTFSIIKPDATARNLTGAVNAMIEQSGLRIIAQKRTRITR
                     EQAETFYAVHRDRPFFGELVDFMISGPVVVQVLEGENAITKYRDIMGATDPAKAAQGT
                     IRKVYAKSIGENSVHGSDAATTAAQEIGQFFAGNEIVG"
BASE COUNT         1314 a         2071 c         2094 g         1314 t
ORIGIN      
        1 gtaggagcgt cggagctcag ttcgttgcct acggacaagc ggtggcgctg agccgccgga
       61 ggaacctgaa tgctcggaca caatcgcagg aaaatgctcg gtgccgagtg catggcggac
      121 atgctcaacg gctacggcgt cacccacgtt ttccacgtac cggccgtgct gcgaaggagc
      181 ttcgtggaga tggagcgccg caccgacata aagcggctgc atgtgcatgg cgagaaatcc
      241 gccgcctata tggcggacgg ctatgcacgc gcctccggca agcccggcat ctgcatggcg
      301 caggtgatcg gtgcgctcaa cctcgcggcc ggcctgcgtg atgcttggct tgcgcacgct
      361 ccggtgatcg ccatgacggg ggggcgcgaa ccgcgtacca aattccgcaa ggtctaccag
      421 gaggtcgacg acatgccggc gttcgagccg gtgaccaaat tcaacgccac ggtggatgat
      481 gtggcgcgct ttcccgacat ggtgcgccaa gctttccggg tcgcggtgtc gggcacgccc
      541 ggcccagtgc acctgcagtt tcgcggcaac gagggtcagg ttgacgccga ggaagccgag
      601 atggaaccct tgtgcgagcc gcaattccgc tgcgttcccc cgtttcgtcc cgagcccgac
      661 caggcgagcg tgcttgaggc gctgaaggtt ctcgaggccg ccgaacgccc cgtgattgtt
      721 gcgggtggag gcgtgcgcgc ttcaaacgct caagccgagg tggttttgtt cgccgaagcg
      781 ctgcagattc ccctcgcgac ctcgctcaat ggcaaggaca ccatcccggg cacccatcca
      841 ctgtcggtcg gagtcgtggg ttcctattcg cgcgagagcg cgaaccgcgt cgtcaaccat
      901 gcagatctca tctgcttcat cggtagcgag tccgggggca tgaccacgca tttctggacg
      961 gtgccgccga tcggaacacc cgcgatccag atcgacatca atcccgaggc gcttgggcgc
     1021 aattatccgc tgcgcgccgc tgtcaacggc gatgccaagg tcacgctcga gcgcatgttg
     1081 agtgcggctg accgtggcag cgccggtaag cgcaaggcct gggtcgaggc ggcacgaaaa
     1141 atttgtgccg agtggcggga gaaataccaa gcgctgctca cctccgacgc ggtgccaatc
     1201 cgtccggagc ggctgtgcag cgagctcacg caacatgttc ccgatgatgc gatcgtggtg
     1261 gtcgacaccg gtcatgctgg catgtggatg ggcggcatgt acgatctgac gagcccgcgc
     1321 cagagctata tgcgtagcgc cggccacctg ggctgggcct tcccggccgg gctcggcgcc
     1381 aaatgcgcgt gcccggagcg gccggtggta acattcacag gcgatgctgg attctggtat
     1441 cacatcggcg agatcgagac cgcggtacgc tggcacatca acgccgtcac ggtcgttaac
     1501 aacaatggtg gcggcaacca gagcaagcgc ggcttcgacc gcgtctatgg cggcacccag
     1561 accgaaggcg gccgcactct gtggaccttc aacaagatga acttcgcccg cattgccgag
     1621 gacatgggcg cgctcggcat ccgggtcgag aacgcgagcg ctttcccggc ggcactcgct
     1681 caggcgctga ctgccgatcg acccgccgtg atcgacgtgg tgacggatat cgacgcactg
     1741 gcgccgctgg ccgtgagcta acgcccgact ctttacttca tatttgcgtt catcaccgtg
     1801 tcaaggcagg ttcccgggaa tcggaggccc actatggcga ttctcgattc gccggtcgac
     1861 gctaagagtc tcgaattccg caccaacgcg gcgcagatgc gcgcgctggt ggatgatttg
     1921 aaccgccgcc gcgccgaagc ggcgctgggt gggccggccc gggcacgcga acgccacacc
     1981 gcgcgcggca agttgttgcc gcgcgagcgg gtgttgcggc tcatcgatcc cggaacgccg
     2041 tttctggaac tgtcgccatt ggcggcgaac ggtatgtatg aggacgccat tcacggcgcc
     2101 ggattgatta gcggcattgg tcgggttgaa gggagagaat gtgtcatcat tgccaacgat
     2161 gccaccatta agggcggcac ctattttccg atgacggtga agaagcacct gcgtgcacaa
     2221 gagatcgcgt tcgaaaaccg attgccgtgc atttatctgg ttgattctgg cggcgccaac
     2281 ctgccacgcc agaccgaagt gtttcctgat cgcgagcact tcggccgcat cttctacaac
     2341 caagccaatc tttccgccgc cggcatcgcc cagattgccg ccgtgatggg ctcatgcacg
     2401 gctggcggcg cttatgtacc ggcgatgtcg gatgagaccg tcatcgtgcg caatcagggc
     2461 accatttttc tcggcggtcc gccgctcgtg aaggccgcaa ccggggagac cgtgagtgcc
     2521 gaggatctag gcggcgccga ggtccacacg cgccgctccg gcgttgccga tcattacgcg
     2581 gccgacgaca atcacgcgct ggcaatctgc cgccgcatcg tcgccaatat caacgttagt
     2641 aagcgcgccg acgttgcctt catggcgccg gccgatccgg tccgcgatcc ggccgagctt
     2701 gatggccttg taccagccga tccaaggaag tcgttcgaca tccgtgcggt catcacccgg
     2761 ttggtcgacg gctccgtgct cgacgagttc aaatcacttt acggcaccac cttagtcacc
     2821 ggctttgggc atctcggcgg aattccgatc ggcgtcgtcg ccaacaacgg catcctattt
     2881 tccgaatcgg ccctcaaggg tacccatttc attgaactgt gctgccagcg ccgcattccg
     2941 ctgctgttcc tacagaacat tgccgggttc atggtcggta gccaatacga agcgggcgga
     3001 atcgctaagg atggtgccaa gatggtgacg gccgttgcct gcgcgcgcgt gccgaagatc
     3061 acggtgatcg ttggcgggtc ccacggcgcc ggcaactact ccatgtgcgg ccgcgcgttc
     3121 gggccgcggt ttctgttcac atggcctaat gcacgcattt cggtgatggg cggcgagcag
     3181 gcggccagtg tgctcgccac ggtgaagcgc gaaaatatcg aggccgatgg cggcaagtgg
     3241 tcggaggtgg aagaggaaga attcaagcag ccgatccgtg agcaatacga tgtggagggt
     3301 aatccatatt atgccaccgc ccgcctgtgg gacgacggca tcatcacgcc cgccgagacc
     3361 cgccgtgttc tgatgctggc gttctcggcg acgctcaatg ccccgatccc gcgtacgcgg
     3421 tacggggtgt ttcgaatgta ggcgcagtca gatgagctga aggaaaatca agatcagccc
     3481 gatcatcgaa acggtccaaa cggcggttcg cacccacggg ataccggcga ggtatatgac
     3541 ggcgtaagcg actctcgccc agaaaaacaa ctgcgcccct agtcccgtta cggcactgtt
     3601 ccggttggcg gcttcggtca cgagtaccaa tactgcgaag agcacgaggc tctcgagcat
     3661 gttgctatgg gcgcgttgcg ctcgtccggc ccagccgtcc gccggcggaa ggtcctcccg
     3721 gttgcccgaa agtcttggca ggccgaattg caaggcgcac ccggacaccg cgacgagcat
     3781 ctggataaag gtcagtgccg ctgaccaaac gagcaatgtg agttcaagcg acatggttgt
     3841 cccccctttg gtaacttcgc cttgctaccc gatttttccg cgatctaggt gcgggccatt
     3901 tcgccgcagc cgcaatactg ggcggtgaac gtttgtaagg catcggaaca ttgtcgggtt
     3961 gcggccgtca tagccggcgc ctatctgcag gcgatcgctt cttgcggtcg tgccacaaaa
     4021 gcttgcgagg gaggggggct gaacggagta agtgtgatga cattcaaagt ctacagcagt
     4081 ccggccggga ctgacgccgt ttcaccaatt cacaaggatc gcatgctgtt caaggaattc
     4141 ccgaactttg acgaggcctt gtcgtgggca agccacatca aggaaaccgg gcggatggcg
     4201 gttttgatcg aagacgagac cggcaggaca tttgacaagc gcgaaattgc ggcggcactt
     4261 gccgatcgcg aggcgcgtga catacgcggt gtcaccgcgc atcgcgggta gggcggcgct
     4321 acaagctctt gtagagccgc tcgtcgtaca gtgccccgct catcgggccg agcttctcgc
     4381 ggaattcttt ggtgctggca gttacgatat gggagtcgac tgcggcacgg ttcttccata
     4441 tttccgcgac cgtgaagtgg ttggcccggt tgttctgttg ccacgcctcg aattgcaggg
     4501 aatcgggttc cttgcgagcg tcgtcggcga gctttttgag catgacgatg caatcgtcct
     4561 tgttgggcgg ggtaacgtcc acatgggtca cggcatagat cgcgcccctg ccgaccgacg
     4621 cagttgacgg cgcaactgcg acgccgttgc tggggcgctc gtcatagaag cttgcctgca
     4681 tcggcttgag cttgtccttg aattgcttca gagcaccgcc gcctgtatgg gcttcagccg
     4741 ccttcaaatc cgtccacgcc tccaggatga cgaactgatt cttgcggtcg atgcgttgca
     4801 gaatgtcgta gcgctgattg ccggcttcct tacggctggc ggcggcgacc tgcttgagga
     4861 ggccggcaac ttcaccctgg gctgacggca acacctcgat atacgtgacc atataggcgg
     4921 ctccgccggc cggggcttgc gccattgcgg ccgatgcaac cgccactgcg ccagccgcga
     4981 ccagcaccga tccaaacacc ctcatcgttt ctctccttag aatatcgagc cgtccacacg
     5041 gtcttattcg cggcaaaacg tatcgccgcc aaccagcgtc cgtcaacaat gggatggcgt
     5101 ctcgcggaga gacccggttt agctggaggt cgcccatttc atcaagcgat caaattgtga
     5161 cctgacataa tcaaatgctg tttgctggag ttcgttggcg gtggtccagt tcaccagggg
     5221 tttcgacgcg cctgggtcca tgttgtcgtg gatagcagcg cccccgatcg tcaaccccac
     5281 accgacgatc aacccgaaga taaatcgcat tgcccatact cccttgctag tggctcgtca
     5341 cggcactttc cggcacggcg gccgccgccc cgccgctgca agcctcttta catgcaaaag
     5401 ttcctccccg ggtaatcata cgtgattgca cgtggcggga acatgcccga tccggagatt
     5461 gttttgatcc ggagatgagg tggaaatacg aaattcagaa aaaattcaag gccccggatt
     5521 ttcttaatcc ggggcctggc tcaaagatcc ggcaaagccg atcagcacac ccaacgacgc
     5581 cgtggccccc acggggtttc tacccagcgc cggcagccat agctgtaggc gccataataa
     5641 gagcccgggc cgcccgacca ccagccatga tgatgaggat gccagcctcc gtaccaccag
     5701 gccgaagcag acgtcggggt gagcgcggcg gtgccgaggg caattgccgc aacggcggcc
     5761 aaagaaagct tgcggaacat gttcgatctc tcctcttttt ggacggaatg cgaattgtcg
     5821 catcatcctg catcttggtc gtcccggctg acccagcggt tcagcttgtg gcgaaaatat
     5881 cggtttccgt ctgaacctag cctgagcccg aaatttctcg tgtattcagt aacatgaatg
     5941 gtcagcgcgg gcggcattca tactgcgttc acgaatcccg caatgccttg ctggttgtgg
     6001 agctcgccgc tataagcgcc gcgacattgc atccctgacg tgaaggatac ggcatggcga
     6061 tagagcgcac attttcgatc atcaagcccg acgcgaccgc gcgcaatctg accggcgccg
     6121 tcaatgccat gatcgagcaa tccggcctgc gcatcattgc ccagaagcgg acacgaatca
     6181 cccgcgaaca ggcggagacc ttctacgcgg ttcaccgcga ccgaccattt ttcggcgagc
     6241 tcgtggactt catgatatca ggtccggtgg tggtgcaggt gctcgaaggc gaaaacgcca
     6301 tcaccaagta tcgtgacatc atgggggcga ccgatcccgc gaaggcggcg cagggcacaa
     6361 ttcgcaaggt ctacgccaag tcgatcggtg agaattcggt gcatggctcc gacgccgcta
     6421 cgaccgccgc gcaagaaatc ggtcagttct ttgctggcaa cgagatcgtg ggctgatgtc
     6481 acgttgatgg cgtgattgcg tcgcgttttc gccgccagag cgcgttccgg gcaggtcctt
     6541 tactccgccc cacttacgag ggtcggatcg cgcccttggg cgcgatccgg gtgaggggac
     6601 ttctgcgcga ggcggagctt tatggaaagc gcccttaacc ccgacctctg gccctcgaac
     6661 accagcgaaa acgccatgat ggcaaggccc gcgaggtagc cacaccaggc gcctgcatac
     6721 gaatctacat caccgaaatc tgctctagcc accttcccac gtggccctgt agactatcgc
     6781 cgcgccgaca aac
//
LOCUS       DATILV010000154         2653 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2336246, whole genome shotgun sequence.
ACCESSION   DATILV010000154 DATILV010000000
VERSION     DATILV010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2653
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2336246"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..296)
                     /locus_tag="VLJ17_03445"
     CDS             complement(<1..296)
                     /locus_tag="VLJ17_03445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22064.1"
                     /translation="MGKFTIQPHGRLQEWIAHEQGYFRDENLDYEFRGGLSAERKKEV
                     DGAGKVVDVLSGAFESYEQGRGNKGVKSDVSCACHWAVNQASSRQIGTMWGKSYV"
     gene            complement(406..828)
                     /locus_tag="VLJ17_03450"
     CDS             complement(406..828)
                     /locus_tag="VLJ17_03450"
                     /inference="COORDINATES: protein motif:HMM:NF023123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3291 domain-containing protein"
                     /protein_id="HSV22065.1"
                     /translation="MPLVSITRLRVRAWRYLPAFVAGTFRSALQVRASSGSLAVSILS
                     DSNFAFWTRTVWNDEKALRSFMLAGAHKKVMPRLLEWCDEAAVVRWLQESRDPPTWPE
                     AHRRMQSEGRRSKVDHPSAAQERFEIPHPRTTVALKLK"
     gene            933..2307
                     /locus_tag="VLJ17_03455"
                     /pseudo
     CDS             933..2307
                     /locus_tag="VLJ17_03455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087945.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS701 family transposase"
     gene            complement(2328..>2653)
                     /locus_tag="VLJ17_03460"
     CDS             complement(2328..>2653)
                     /locus_tag="VLJ17_03460"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HSV22066.1"
                     /translation="MGRNQIGDIEAGVLKTTAPTVSNDVDFFPGSSLKWGFGHMINMQ
                     PVADGRTAGSLTWGGLFNTYYWIDPGRRIAAVFMTQVLPFADHRSLRIYRQFERGIYA
                     AVKAG"
BASE COUNT          505 a          808 c          839 g          501 t
ORIGIN      
        1 acgtaggatt tgccccacat cgtcccgatc tgccgggagg aggcctggtt gacggcccag
       61 tggcacgcgc acgagacgtc cgatttgacg cccttgttcc cgcggccctg ctcgtaggat
      121 tcgaatgcgc cggagaggac gtcgacgacc ttgccggcgc cgtcgacctc tttcttgcgt
      181 tccgccgaca ggccgccgcg gaattcataa tcgaggttct cgtcgcggaa gtagccctgc
      241 tcgtgggcta tccattcctg caagcggccg tgcggctgga tcgtgaattt tcccatggcg
      301 ctttctccga atggccggat cgttccacaa tgatggcgcc gctgcaattg tcgaccaatg
      361 gacggcgccc cggctccgcg accgcactgc ctgccggcgg ccgggtcatt tcaatttcaa
      421 tgcgacggtc gtcctcggat gcggaatctc gaagcgttct tgcgccgcgg aaggatgatc
      481 gaccttcgag cgccggccct cgctctgcat gcgccgatgc gcctccggcc acgtcggcgg
      541 atcccgcgat tcctgcagcc agcggacgac cgcggcctca tcgcaccact ccaggaggcg
      601 aggcatcacc tttttgtgcg cgcccgcaag catgaaggag cgcaaggcct tctcgtcatt
      661 ccacaccgta cgggtccaga aggcgaaatt ggaatcgctc aggatggaga ccgccaggct
      721 tccggatgaa gccctgacct gcagcgccga ccgaaacgta ccggcgacga aggcgggcag
      781 atagcgccac gcccgcacgc gcaggcgcgt gatcgatacc agcggcatgc gggcgccata
      841 gcaagcgccc gccgcaccgg caagattggc cctcgtccta gcactacttt ggcagatttt
      901 cgcgggcgcg ggattcccaa atcagttttt ctgtgactca tgggcggtcg gcttttggag
      961 gggccgacca tggttagcag gacgtcggat tggagaggcg agcttggacg ttggctcaag
     1021 ccgtttctgg atcggttggg tcacaaagca cggcgacaaa tgtgcccgct ctatgtgtcg
     1081 ggactgatcg gccctggcga tcgcaagagc gttcagccga tggcggagcg ggttgcactt
     1141 ggcgactacg atcaattgca ccacttcatc gcggccgggg tctgggatgc cgggccggtg
     1201 gagacagaac ttctggttca agcggataag cttgtcggcg gcagcgatgc cgtgctggtg
     1261 atcgacgaca ccgcgatacc caagaaaggc acgcattcgg taggtgtcgc tgcgcagtat
     1321 gcttcggcgc tgggcaagac cgcgaactgc cagaccctgg tgtcgctgac actggcgcga
     1381 ggtgaagtac cagtcatgct ggcgttgcgg ttgtttcttc ccgagagttg gacgagcaat
     1441 cgggcccggt tggatcgagc gggtgtcccg gccgaatgtc gaacggcacg aacgaaaccg
     1501 gaattggctc tggcggagat tgatcgtgcc atcgcggccg gtgtgcgctt tggctgcgtc
     1561 ttagcggatg ccggttatgg gatgagcgcg ccgttccgtc aggggctcac aggtcgcaaa
     1621 cttgcctggg cagtcggtat tccgcggcac ctcaaggtgt accctgccga tgtgcggatg
     1681 atctggccgg ttgccaagcg cggtcgtccc cgtcagcggc acgttcctga cattctatcg
     1741 ataccggctg aagacatgct ggccaacgcc aaatggcgca ccatcagttg gcgcaccggc
     1801 acgaaaggaa agctcaaggc tcgtttcgcc gctgtgcggg tgcgggtcgc cgacggacca
     1861 ccacagcgga tcagagacaa aggccggcaa catttacccg gcgacgaggc ttggcttatc
     1921 ggcgaacaca ggatgtcggg agagaagaaa tactatctcg ccaacctgcc ggcgaagact
     1981 gacctgcgga ccctagcggc caccatcaag gcgcggtgga tttgcgagca ggctcaccag
     2041 cagctgaaag aagaacttgg tctcgatcac ttcgagggcc gatcctggca gggcctgcat
     2101 cgtcatgcgc tcatgacgat gatcgcctac gctttcctcc agcatcgccg gctcgcaaca
     2161 gcaaggcggg aaaaaaagaa tcaacgggcc gccgcctcag ccaactttgc ccgccgtacg
     2221 ccacgccatc ctcgaactct tcgctcgact accgccgcgg cgatgcccgc attgtcgaaa
     2281 atggatttgc aacgagcggc ggcgtgagta aatctgccaa agtagtgcta gcccgctttc
     2341 acggctgcgt agataccgcg ttcgaattga cggtagatcc gcaatgaccg gtgatccgca
     2401 aacggcaaca cctgcgtcat gaaaacggcc gcgatgcgtc ttccgggatc gatccagtag
     2461 taggtgttga acaggccgcc ccaggtcagg cttccggcag tgcggccgtc cgcaacgggt
     2521 tgcatgttga tcatgtgacc gaagccccac ttgagactgc ttccgggaaa gaaatcgaca
     2581 tcgttggaga ccgtcggggc cgtcgttttc aggacgccgg cctcgatgtc gccgatctgg
     2641 ttccgaccca tga
//
LOCUS       DATILV010000155         1505 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_35016, whole genome shotgun sequence.
ACCESSION   DATILV010000155 DATILV010000000
VERSION     DATILV010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1505
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35016"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            19..1311
                     /gene="shc"
                     /locus_tag="VLJ17_03465"
     CDS             19..1311
                     /gene="shc"
                     /locus_tag="VLJ17_03465"
                     /EC_number="5.4.99.17"
                     /inference="COORDINATES: protein motif:HMM:TIGR01507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051007 - squalene-hopene cyclase activity
                     [Evidence IEA];
                     GO_process: GO:0019746 - hopanoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="squalene--hopene cyclase"
                     /protein_id="HSV22067.1"
                     /translation="MHLHWDKKKISWRNFFLVLDRVTHWAERVHIRPLRTIALRKAEK
                     WMLERFEMSDGLGAIYPSMMNAIIALRCLGYSVDDPQVIRALDEFEKLGIEEEDTFRM
                     QPCMSPVWDTAYALFALGEAGVPPTDPRMVKAADWILQKQVRKPGDWTVNNKKGKPGG
                     WYFEFNNEFYPDVDDTAMVAIGLSKVEHPNGRYQLESVERAIDWILSMQCKNGGFASF
                     DKDNDRMVFQYIPFADHNAMLDPPTVDITGRILEMFATYGYDQNHRAVKRALKFVRDQ
                     QEPDGSWFGRWGVNYVYGTALVLRGLEAIGIDHHEPYVQQAAEWLRMVQNPDGGWGET
                     CGSYDDPNTKGVGPSTPSQTAWAVMGLLAANDTRSDSVAKGVAYLLKTQKKDGSWDEP
                     WYTGTGFPRVFYLMYHMYRQYFPLIALTTYKKVMIEKN"
BASE COUNT          347 a          446 c          425 g          287 t
ORIGIN      
        1 gggcgcgaca agtcgcgcat gcatctgcac tgggacaaaa agaaaatctc ctggcgcaat
       61 ttctttcttg ttctggatcg cgttactcat tgggccgagc gagtccatat ccggccgctg
      121 cgtacgattg cgctccgcaa ggctgagaaa tggatgctgg aacgcttcga gatgagcgat
      181 gggctgggcg caatttatcc gtcgatgatg aatgcgatta tcgcgctgcg gtgcctgggt
      241 tactcggtag acgatccgca agtcattcgc gcgcttgacg agttcgaaaa acttggcatt
      301 gaagaagaag acacgttccg catgcagccc tgcatgtctc ctgtatggga cacggcgtac
      361 gcgctctttg ccctgggcga ggctggcgtg ccgccgaccg atccgcgcat ggtgaaagcc
      421 gccgattgga tcctgcaaaa gcaagtccgc aagcccggcg actggacggt gaacaataaa
      481 aaaggcaagc ccggcggctg gtacttcgaa ttcaacaatg agttttatcc cgacgtcgat
      541 gacacggcca tggtcgcgat tggactgtcg aaggtcgagc atcctaacgg ccgctatcag
      601 ctcgaatcgg tcgagcgcgc tatcgactgg atcctctcca tgcagtgcaa gaacggcggc
      661 tttgcgtcct tcgacaaaga caacgaccgc atggtctttc agtacattcc cttcgccgat
      721 cacaatgcca tgctcgatcc gccgaccgtc gacatcaccg gccgcattct tgaaatgttt
      781 gcgacctatg gatacgacca aaatcatcgc gccgtgaaac gcgccctgaa gtttgttcgc
      841 gaccaacaag aacccgacgg ctcatggttc ggacgctggg gcgtgaacta cgtttacggc
      901 acagctctgg ttcttcgcgg actcgaagcc atcggcatcg atcaccacga gccttacgtg
      961 cagcaggctg ccgaatggct gcgcatggtg caaaatcccg acggcggttg gggagaaact
     1021 tgcggctcct acgacgatcc caacaccaag ggcgtcggcc cgagcacgcc ctcacagacc
     1081 gcatgggcag tcatgggcct gctcgccgcc aacgacaccc gcagcgactc agtcgccaaa
     1141 ggcgtcgcct acctcctaaa aacccagaaa aaagacggct cctgggacga accctggtac
     1201 accggcaccg gcttcccccg cgtcttctac ctcatgtacc acatgtaccg ccaatacttc
     1261 cccctgatcg cgttgaccac gtacaagaaa gtgatgatcg agaagaatta ggtggcgaag
     1321 cgagggacct cgatgctcag ttcctccaag ctgaggaggt ccatcgtgcc cccctggagc
     1381 acggatcaca ggatcgcgat ggcggcggca gtctccgcta gggcgaggta gagggcgagt
     1441 gggcccaccc gtccgatagg cgtagacttc gtgctatgac aaacagcgat aataaaaaga
     1501 aaaga
//
LOCUS       DATILV010000156        13860 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3612921, whole genome shotgun sequence.
ACCESSION   DATILV010000156 DATILV010000000
VERSION     DATILV010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 13860)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13860)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13860
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3612921"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..938
                     /locus_tag="VLJ17_03470"
     CDS             <1..938
                     /locus_tag="VLJ17_03470"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV22068.1"
                     /translation="YPGFALDKIRQGYQTNIWGMPTYYLTRSGILQKHGINFEEFPVP
                     SGNLTMQQMVARQVDLGTYAGQSMILGHDKGGLVGIAQIELVGKTTRVMARKDLNITS
                     IAQLRGKKIANQTGSSIGNVFVDTIAPMHGLRKGDFQEVRMDVNNMVAAMAAKTVDAM
                     VNVEPYNMIAEADGIASEIMDFSSVDKMPLFMAATPDFVQKSPDTVIAYLKAWLDAAR
                     DFKTAPDKVADVIFGFYADKGYKMARDTFQKALSRVEVDPGFPSDLKPYMQEQAEILL
                     KARIISAIPDWGKVLRSEFMAKAQAGEEVTGTIPR"
     gene            935..1114
                     /locus_tag="VLJ17_03475"
     CDS             935..1114
                     /locus_tag="VLJ17_03475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22069.1"
                     /translation="MNDLVRLLAEITGLCLFGRIDALACRLEAIPNRPVDIIIEPVYK
                     ERLRREVDRDRTVGF"
     gene            1301..2548
                     /locus_tag="VLJ17_03480"
     CDS             1301..2548
                     /locus_tag="VLJ17_03480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018701191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22070.1"
                     /translation="MASGVLNKSLSESVCWNFKLLAHHELAGFGGMGEGMAIQVAKDG
                     RRIMWLAHESAPKNFTGVDVSDPRQPKLVVQTDLPESFMRSNSLELTGDIMAVAYQTQ
                     KVGQKPAGFELFDIAVPEEPKSIAFVDASGPMSRGVHQLWFCDGEYVHLAAGAADFKP
                     THPQDDQFYRIFDVRNPSKPAEVGRWWLPGTREGDGASPPARHQAPLLDRGFRAHNTN
                     VYPQRPDRCYLGYIDAGMFVLDISDKARPKPICQWDNSPPYTGFTHTVVPLFDRDLLI
                     VTDESTNDNASDWPKLVWILDARDERHPVPISTCPMPPVDAYKSRGGRFGAHNIHENT
                     PSPYAWHSEDIVIGTFFNGGLRAYDITNPYQPKEVAAFVPPAPAMSPVGSIQLNDCFA
                     DERKIVYTVDRFSGGLYILEMDF"
     gene            complement(2674..3279)
                     /locus_tag="VLJ17_03485"
     CDS             complement(2674..3279)
                     /locus_tag="VLJ17_03485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22071.1"
                     /translation="MSTMIVHDTRLKGQTPLNYNYVLVVNQTKSIHHILSVVANCARR
                     QRKLSLLHIFCHGYEADWNMGQQICTPGAAGGFGLQLGREGLSLYNATQTTMWKGLID
                     RIVLFACAPADTGRGNEGTAGDGRRFCGELALWSGAEVIAARETQYYNTIQAHYRGGR
                     TANNTIDFGAWEGPVYSFDPNSGQPRQITPQAYDMANPAVI"
     gene            3461..4483
                     /locus_tag="VLJ17_03490"
     CDS             3461..4483
                     /locus_tag="VLJ17_03490"
                     /inference="COORDINATES: protein motif:HMM:NF014542.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HSV22072.1"
                     /translation="MLKLFPSPTAGPFGRRLRRERGSRVPVTVVTGFLGAGKTTLLRH
                     FLGLPEGAGTAVIVNEFGETGIDNALLCNSSDNIALLGNGCLCCTVRSDLQVTLHRLV
                     ADRERGVVPYFGRIVIETSGLADPLPILTTFATDRALGGEFHVEAVIAVIAAQNGAGT
                     VENFMEARRQIILADRIVISKTDIADEDAPLVLTRTLRDLNPRAHIIEAVAGKVDPQW
                     ILAERTGEFTGGFIVDPAIHTDDITSFTLIEDEPIAWDTFARAMETLIALRGPDLLRV
                     KGFLNVAGCAGPVVVQFVQHLAHPPVELDCWPGGDRTSRVVFIARNLSKGQVKALFAA
                     VRAVAV"
     gene            complement(4603..5430)
                     /locus_tag="VLJ17_03495"
     CDS             complement(4603..5430)
                     /locus_tag="VLJ17_03495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014332836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HSV22073.1"
                     /translation="MAQVVDSRTQAESEAMAGDARRGVPGWIITLSSLVVLTLLWEWF
                     GRGINPVFGSYPSAIAEAFWDLAQSGKLLAAMSESLRPFAVGYGLAILFGVPLGLVIG
                     RYRVAEAALGVYVTAGYAMPLVALVPLLVLWLGLGFAVKAAVVFLMSVFPICINTWLG
                     VTAVPKTLIEVGKSFVASNTVILRRIILPATLPYMAGIRLAVGRAVVAMVIAEFFTTI
                     SGLGAIIINSANNFDTATMFVPIVVLMVMAIGLNGLIGFVERRVAPWQAEIAGRDRE"
     gene            complement(5621..6418)
                     /locus_tag="VLJ17_03500"
     CDS             complement(5621..6418)
                     /locus_tag="VLJ17_03500"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020087400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV22074.1"
                     /translation="MNAMGEVSLIEVSKRFTLRVGHEVQTVQALLRVSFTVQDGEIVS
                     LIGPSGCGKTTALRIAMGLELATAGRVMVDGHQVTGCGHDRGMVFQHAELLPWLTAMQ
                     NVMFGLEMKGMRGAELRETAAKYLDLVGLASSKNRRPHQLSGGMQQRVGIARALAIDP
                     KVLLMDEPFGALDAQTRETMQEELLQVHARTRKTILFVTHDLDEAVLIADRVVIMREG
                     RIQEILKVPLPRPRGDLGVARGTKEFADTRYHVWKALHAAPEVPMVH"
     gene            complement(6415..7413)
                     /locus_tag="VLJ17_03505"
     CDS             complement(6415..7413)
                     /locus_tag="VLJ17_03505"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV22075.1"
                     /translation="MMVCKRSWGLLFCTMLAVPVALGGALAQNLKPWRHGIIEAKSDA
                     GILYMASKRDFAGKLGLKLNFVQLKNDTIALKALLAGELDSYEGGAGGAMMAAARGAD
                     VRIVGCNWLAAPHGVYVRPNIASMADLKGKSVAVSTPGSFPEIFARAAFEKAGIPAGQ
                     VRFAAMGSDTDRYKALIAGVVDGAIITNEFVPISGKDGIRDLMPAIEVMPNFVRICLE
                     MTDQTLAARRDDAVKFVAAEIEGLRFAMSHRDETIRITHEIIGAKPDDPRPAFVFDEA
                     VRTKVIGTDLPIPLEKLEFMQKQLISSGMLARPGELEKMTDRSVREQALALLAKGQ"
     gene            7647..8114
                     /locus_tag="VLJ17_03510"
     CDS             7647..8114
                     /locus_tag="VLJ17_03510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HSV22076.1"
                     /translation="MAQKFALNVNGKDHTVDADPDMPLLYALRNDIGLNNPHFGCGLA
                     QCGACTVHLDGQAIRSCVTPVSAVGNGKVVTLAGLGTPEKPHPLQTAYVEEQVPQCGY
                     CINGWVMTAAAFLRDNKKPTEAQIKTALEGLKCRCGTHMGILRAVKRAGEMMG"
     gene            8126..10429
                     /locus_tag="VLJ17_03515"
     CDS             8126..10429
                     /locus_tag="VLJ17_03515"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSV22077.1"
                     /translation="MTRFEKPAAFSRRAMLKSGGALVVSIGTPIGLDTVLGISEANAQ
                     GAGQLAAAVKPPLTPDQLSSYIAVNGDGTVAAFFGKMDMGHGITVAIAQMVAEELDVP
                     FKAVKMYLADTATSVHQGGASGSTGIQLGGKQMRMAAAEARRVLVEMAAERLSVPADQ
                     LTVVDGVVQSKTDATKKASYAELIGGRYFNVPLEWNKQYGNTLYAPGKAQPKKPSEYK
                     IVGRPIKREDVAPKVFAQEDFCTDVKLPGMVHARMLRPAVAGSVPVKVDESSIKDIPG
                     ARMVWQNAFLGVVADKEWDAIQAMQKLKVEWSQVPPPFPPQASLYDHIRKSTVRKRSV
                     DKENGNVDEAFKAAAKVIEAEYEWPFQSHAGMGPACALVDVKDGFATCYTGSQKSHFV
                     QAGIAATLELPLEKVHAIWATGPGSYGRNDADDCAMDAAVLSKAVGKPVRLQYMREQG
                     TGWDPKGPASVHRARMAFDAAGNITAYEFTSKGFSRIDVDTNGGKPQDTLAGHTRGVA
                     LKSGDGFGVPAESYEFPNKRLAWETIPPLLDRASPLRSSHLRDPVGPQIHFASESFMD
                     EVAAALNLDPIEFRLRHLKDPRDIAVVKAAAEKAGWQPRPSPQRQTGVKVNGRGIAYA
                     QRNGTRVAVIAEVEVDRSSGKIYARRFVVAHDCGQVINPDGLAKCIEGNIVQGISRTL
                     WEEVKFSDKTVTTVDWISYPILDITETPDKIETVLIDHPEIAPSGAGEPSIRPVAAAI
                     ANAIFDATGVRMRRVPFSPDRVKQAMA"
     gene            10680..11765
                     /locus_tag="VLJ17_03520"
     CDS             10680..11765
                     /locus_tag="VLJ17_03520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HSV22078.1"
                     /translation="MDLLEAAVIGTGWCGGIRAETLARSALCRKLHICEIRPDRLAEV
                     KALTNPASATLDYQDIVRNPDISVVYICTTPEHTHFPITRDCLRAGKHVLLEKPIAME
                     LFEADELIATAKRNNVKFTIGYSQRFNAKIAYAKKKIADGTLGKPVSVMVSRHITRSL
                     GKRIAGRTRLSPAAMESTHDLDFVFWLLEPAKPARVYAQGAYGFMKDINGSFDIMWST
                     VTMDDGTLVAIGGGWNLPPSYPNYCATWIEITGTEGSLFLDDTQRDNWLNTVAEGTRF
                     PMSTMPGEQVDHVFAGQMGPETLHFLESVMLDRPPMVSPEGARRVMECYLAADLSAEW
                     GEPIDVPMNNQALAAVQDLYKKFRAPV"
     gene            complement(11860..12366)
                     /locus_tag="VLJ17_03525"
     CDS             complement(11860..12366)
                     /locus_tag="VLJ17_03525"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006725 - cellular aromatic compound
                     metabolic process [Evidence IEA];
                     GO_process: GO:0019439 - aromatic compound catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic-ring-hydroxylating dioxygenase subunit
                     beta"
                     /protein_id="HSV22079.1"
                     /translation="MNKPLDEAATVSRAEIEDFLFHEADLLDNWKLDDWLALLTDDAA
                     YYVPPNDQPNADHRFTLFTIADDIVRLRERLIRLKDPNCHAEYPPSRTRRLITNVRII
                     GIDGDTIGVAANFVVYRYRRGEPVREFVGHYRHKLRRIAGVLKIAERRAILDAHELGA
                     MGAVSFIL"
     gene            complement(12363..13688)
                     /locus_tag="VLJ17_03530"
     CDS             complement(12363..13688)
                     /locus_tag="VLJ17_03530"
                     /inference="COORDINATES: protein motif:HMM:NF013044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HSV22080.1"
                     /translation="MNDHHAGHHTGPESHNGNGRPLVRESRENLSFSVNREVFVSREI
                     FAREQRAIFDRCWIYIGHASQVPNPGDFKTCSVAGRPMIFCRDRDGQVRGLINSCRHR
                     GAVVCREREGNARGFYCMYHGWTYNTDGTLRGVPDEDSYPPSFDKSAMGLAPVPRLES
                     YKDFYFANFDRDAVDLDTYLAGAKAYIDLVVDQSPSGRMEIISGVQEYDIKANWKLLV
                     ENSVDDYHLIATHATWLNYMRNSGVSMSPPKGSGLLLPTKGLGKDLGNGHLTTDNPNY
                     RGRPVARWISVYGEDAKADIEAIRAELVARLGEARAARIADTNRNLAIFPNLVINDGS
                     SVTVRNFTPVAPDLMHVTAWALGPVEETETQRARRLHAFLTFYGPGGFATPDDVAALE
                     NAQQGYASWREVPWNDLSRGMGKNEQTNTDEEHLRVFWRRWNELMEGRG"
BASE COUNT         2667 a         4324 c         4291 g         2578 t
ORIGIN      
        1 cctatccggg gttcgcgctc gacaaaatcc gccaaggcta ccagaccaat atctggggca
       61 tgccgaccta ctatctgaca cgatccggca tcctccaaaa gcatggaatc aacttcgagg
      121 agttcccggt tccgtccggc aatctcacca tgcagcaaat ggtggcccgc caagtcgatc
      181 tcggcaccta tgcggggcag tcgatgatcc tcggccatga caaaggtgga cttgtgggca
      241 ttgcccagat cgagttggtg ggcaagacca cccgagtgat ggcacgcaag gacctcaata
      301 tcacgtccat cgcgcagctt cggggcaaga aaatcgccaa ccagaccggc tcgtcgatcg
      361 gcaatgtgtt cgtcgacact atcgcaccga tgcatggcct tcggaagggc gactttcagg
      421 aagtccgcat ggatgtcaac aacatggtgg ccgccatggc ggccaagacg gtcgacgcca
      481 tggtcaatgt cgagccgtac aacatgattg ccgaggcgga cggcatcgcc agcgaaatca
      541 tggatttttc gtccgtggac aagatgccgt tgtttatggc cgcaactccc gatttcgtgc
      601 agaagagtcc ggatacggtg atcgcctatc tcaaagcatg gcttgatgca gcgcgcgact
      661 tcaagaccgc gcccgacaaa gtcgccgacg tgatcttcgg attttatgcc gacaagggct
      721 acaagatggc ccgtgatacc ttccagaagg cattgtcccg ggtcgaggtc gacccgggct
      781 tcccgagtga cctcaagccc tacatgcagg agcaggcgga aatcctgctg aaggcgcgga
      841 tcatttcggc aatccccgat tggggtaagg tgctgcggtc ggagttcatg gccaaggcac
      901 aagccgggga ggaggtcacc gggacgattc cgagatgaat gatctcgtgc ggctgcttgc
      961 ggaaatcaca gggctttgcc tattcggcag aatcgacgcg cttgcatgtc gcctcgaagc
     1021 aattcccaac cgacctgtcg acatcattat tgagcccgtc tacaaggagc gtctgcgccg
     1081 cgaggtcgac agggatcgca cagttggctt ctgataagcc gctctttcgt ctggccgatg
     1141 ttgttgagaa catcgatcgc atttggacgt atacggaaca atacacgttg gtcgctttgt
     1201 cagcgacccg aaatgtcagg atgcggtcga acgttgtcaa ctgcgtgtga accgctccgc
     1261 gcaaccttgc atatcatctt caaaattcgt ggagacgtga atggccagcg gggtgttgaa
     1321 caaaagcttg tcggagagtg tgtgctggaa cttcaagctg ctcgctcatc atgagctggc
     1381 cggcttcggc ggcatgggcg agggcatggc gattcaggtt gccaaagacg gccgccgcat
     1441 catgtggctc gcccatgaga gcgcgccgaa gaatttcacc ggggtcgacg tctccgatcc
     1501 gcgccagccg aaactcgtgg tgcagaccga tctgcccgaa agcttcatgc ggtcgaattc
     1561 gctggagctc accggcgaca ttatggcggt cgcctaccag acccagaagg tcgggcagaa
     1621 gccagccggc ttcgagctgt tcgatattgc ggtaccggaa gagccgaaat ccattgcctt
     1681 tgtggacgcc tccggtccta tgtcgcgggg cgtgcatcag ctgtggttct gcgacggcga
     1741 atatgtgcac ctcgcagccg gtgcggctga ttttaagccg acccatccac aggacgacca
     1801 gttctaccgc atcttcgatg tgcgcaatcc gtcgaagccg gctgaagtcg ggcgctggtg
     1861 gttgcccggg acccgcgagg gcgacggcgc atcgccgccg gcgcggcatc aggcgccgct
     1921 gctagaccgt ggcttccgcg ctcacaacac caatgtgtac ccgcagcgcc ccgaccgctg
     1981 ctatctcggc tacatcgatg ccggcatgtt cgtgctggac atctccgaca aggcgcgccc
     2041 gaagccgatc tgtcagtggg acaactcgcc gccttacacg ggcttcaccc acacggtggt
     2101 gcccctattc gatcgcgatc tcttgatcgt caccgacgag tcgaccaacg acaatgcctc
     2161 agactggccg aagcttgtat ggattctcga cgcccgcgac gagcggcatc cggtaccgat
     2221 ctcgacctgc ccgatgccgc cggtcgacgc ctacaagagc cgcggcggcc ggttcggcgc
     2281 ccacaacatc catgagaaca cgccgtcgcc ctatgcgtgg cactcggaag acattgtcat
     2341 cggcacgttc ttcaacggcg gcttgcgcgc ctacgacatc accaatccgt atcaacccaa
     2401 ggaggtcgct gccttcgtgc cgccggcgcc cgcgatgtct ccagttggct cgatccagct
     2461 caacgactgc ttcgcggatg aacgcaagat cgtctacaca gtcgatcgct tcagcggcgg
     2521 gctctacatc ctcgagatgg atttctaggc ccgctacctg taccccggat ggagcgtagt
     2581 gacaccgggg acggccgggc aatcgctagg ctgaccctgg atttcgttgc gctcatccgg
     2641 gcacgaattt gttgcggctg gcatgggggg actctagatg acggcgggat ttgccatatc
     2701 gtaggcttgc ggcgtaattt gccgcggctg tccgctattc ggatcaaaac tgtagaccgg
     2761 tccctcccaa gctccgaagt caatggtgtt gtttgctgtt ctgccacccc gatagtgcgc
     2821 ctggatcgtg ttgtagtact gagtttcgcg agctgcgatc acttctgctc ccgaccagag
     2881 tgccagttct ccgcaaaagc gccgcccatc gcccgcagtg ccctcgtttc cgcgaccagt
     2941 gtcggcggga gcgcaggcaa acaacacgat gcggtcgatc aagcctttcc acatcgtggt
     3001 ttgtgtcgca ttgtacaacg ataagccttc cctgcccaac tgcaggccga acccaccggc
     3061 agcgccgggc gtacagattt gctgacccat attccagtcg gcttcatagc catgacagaa
     3121 aatatgcagg agagacagct tgcgttgccg gcgggcgcag ttagctacca cactcaaaat
     3181 gtgatggatc gatttggttt ggttaacgac aagcacgtag ttgtagttca acggggtctg
     3241 ccccttcaag cgagtgtcgt gaacaatcat ggtcgacatg aaaagcccct cgctgatcca
     3301 caaagccacc gcagattcgc gaatcggctt tgtaaaatcg gcggcggttg ccggtcaata
     3361 tgctcatccc ttatggttgt tccttgatga tgcttggcgc tggtaacgcg aggctctcgt
     3421 tgctgacacc attggactat agcgggtcgc ggttagcgca atgctcaaac tcttcccctc
     3481 tcctaccgcc ggcccatttg ggcgacggct ccggcgcgag cgcggctcgc gggtgccggt
     3541 tacggtggtg acgggatttc tcggtgccgg caagaccacg ttgttgcgtc actttctcgg
     3601 cctcccggag ggcgccggaa ccgccgtgat cgtcaacgag ttcggcgaaa ccggcatcga
     3661 caatgcgctg ctgtgcaatt ccagcgacaa tatcgcgctg cttggcaacg gctgcctgtg
     3721 ctgcacggtg cgctccgatc ttcaggtgac tctgcatcgc ttggtggcag atcgcgagcg
     3781 cggcgtcgtc ccgtatttcg gccgcatcgt catcgagacg agcgggctcg ccgacccgtt
     3841 gcccatcctg actacctttg cgaccgaccg ggcgctcggc ggcgaattcc atgtggaagc
     3901 cgtcatagcg gtgatcgccg cgcagaatgg cgccggcacc gtcgagaact ttatggaagc
     3961 gcgacgtcaa atcatcctcg ccgaccgcat cgtcatttcc aagaccgata tcgccgacga
     4021 agatgcgccc ttggtgctga cgaggacgct gcgcgacctc aacccacgcg cccacatcat
     4081 tgaggcggtg gccggcaagg tcgatccgca atggattctc gccgagcgca ccggcgaatt
     4141 caccggaggc tttatcgtgg atccggcgat ccacacggac gacattacga gcttcaccct
     4201 gatcgaggat gagccgatcg cctgggacac cttcgcacgc gccatggaga cgttgatcgc
     4261 gctgcgcggc cccgatctct tgcgggtaaa gggtttcctt aacgtggccg gctgcgccgg
     4321 gccggtcgtg gtgcagttcg tgcaacacct tgcccatccg ccggtcgagc ttgactgctg
     4381 gcccggtggt gatcgcacga gccgtgttgt tttcatcgct agaaatttga gcaagggtca
     4441 ggtgaaggca ctgtttgcgg cagtgcgggc ggtggccgtc tgatccgtct cccgtcttcg
     4501 ggaagggtgg cctcgcgaag cgagatcggg tgggcttcgt ccgcgccagt ccccacccgg
     4561 cgcctacggc gccaccctcc cgaagaggcg gagggataat ggctactccc tgtcccgccc
     4621 cgcgatctcc gcctgccacg gcgcgactcg gcgctcgaca aagccgatca ggccattgag
     4681 gccgatcgcc atcaccatca gcaccacgat tggcacgaac atggtggcag tatcgaaatt
     4741 gttggctgag ttgatgatga tggcgcccag ccccgagatg gtggtgaaga actccgcgat
     4801 caccatggcg accaccgcgc ggccgaccgc gaggcgaatg ccggccatgt agggcagcgt
     4861 tgcgggcaga atgatccgac gcaggatgac ggtgttggac gcgacgaacg acttgccgac
     4921 ctcgatgagc gttttcggca cagcagtgac gccaagccag gtgttgatgc agatgggaaa
     4981 caccgacatc aggaatacga ctgcggcttt cacggcgaaa ccgagaccga gccacaacac
     5041 caggagtggc accagcgcca ccagtggcat cgcatagccg gccgtcacat agacgcccaa
     5101 cgcggcctcg gcgacgcggt agcgaccgat gacgagaccg agtggcacgc cgaacagaat
     5161 cgcgagccca tagccgaccg caaacggccg cagactctcc gacatggcag ccaggagctt
     5221 gccggattga gcgagatccc agaacgcctc ggcaattgcg ctcgggtagg agccgaacac
     5281 cggattgatg ccgcggccaa accattccca cagcagggtc aggaccacca acgacgacag
     5341 cgtgatgatc catcccggca ccccgcgccg ggcgtcgccg gccatggcct cgctttccgc
     5401 ttgggtcctg ctatcgacga cctgcgccat ctgctattcc gaattcaact atcccatggt
     5461 gtcatgcccc gcgactgcgg cgcacctgtg tgccatcaat tgaacttatg ctgtgcacaa
     5521 gcccgaggtg tttactgggt cgccgctttc acgggcgatg gcaactgcac ggagcgccga
     5581 agacggtaaa ctgtcgtgtc gtcttcgaat ctgtttcgga tcaatgaacc atgggcacct
     5641 ccggcgcggc atgcagcgcc ttccatacgt gataccgggt gtcggcgaac tccttggtgc
     5701 cgcgggcgac gccaagatcg ccgcgcggtc gcggcagtgg caccttcagg atctcctgga
     5761 tgcggccttc gcgcatgatc acgacgcggt cggcgatcag cacggcttcg tcgagatcgt
     5821 gggtgacgaa cagaatggtc ttgcgcgtgc gcgcatggac ttgcagcagc tcctcctgca
     5881 tggtttcacg cgtctgggcg tcaagcgccc cgaacggttc atccattagg aggacttttg
     5941 gatcgatggc cagggctcgg gcgatgccaa cgcgctgctg catgccgccg gacaattgat
     6001 gcgggcggcg gttcttcgag ctcgcgaggc caacgagatc gagatatttc gcggcggttt
     6061 cgcgcaactc agccccgcgc atgcccttca tttcgagtcc gaacatcacg ttctgcatag
     6121 ctgtcagcca cggcagtagt tcagcatgct ggaacaccat accgcgatca tgaccgcagc
     6181 ccgtaacctg gtgcccatcc accatgacgc ggccggcggt cgcaagctca agacccatgg
     6241 cgatgcgcag cgccgtggtc ttgccgcagc ccgacgggcc gatcagggag acgatttcac
     6301 cgtcctgcac cgtgaagctc acccgcaaca gtgcctgcac ggtttgcacc tcatggccga
     6361 cccgcaacgt gaagcgctta gacacctcga tgaggctaac ctcacccatc gcgttcattg
     6421 ccccttcgcc aacagcgcca acgcttgttc acgaacgctc ctgtcggtca tcttttcaag
     6481 ttcacccggc cgcgccaaca tcccggagct gatgagctgc ttttgcatga attcgagctt
     6541 ctcaagcggg attggtagat cggtcccgat gaccttggtg cggaccgcct cgtcaaacac
     6601 gaaagcgggc cgcggatcgt cgggcttggc gccgatgatc tcgtgggtga tgcggatggt
     6661 ctcgtcgcga tgactcatgg cgaagcgcag cccttcgatc tccgccgcaa cgaacttgac
     6721 cgcatcgtca cgccgcgccg ccagggtctg atcagtcatc tccaggcaga tgcggacgaa
     6781 atttggcatc acctcgattg ccggcatgag atcgcgaatg ccgtccttgc cggaaatcgg
     6841 aacgaactcg ttggtgatga tggcgccgtc cacgacgccg gcgatcaggg ccttgtagcg
     6901 atccgtgtcc gaccccattg cggcgaaccg gacttgcccg gccggaatgc ccgccttctc
     6961 gaacgcagcc cgggcaaaaa tttccggaaa ggatccgggc gtggacaccg cgacggattt
     7021 gcccttgaga tcggccatgg aagcgatgtt aggccgcacg tagacgccgt ggggcgccgc
     7081 cagccagttg cagccgacga tgcgtacgtc cgcgccgcgc gcggctgcca tcatggcgcc
     7141 gccggcgccc ccttcatagc tgtcgagctc gcctgcaagg agcgccttga gggcgatagt
     7201 gtcgttcttg agctggacaa aattgagctt gagaccgagc ttaccggcaa agtcgcgctt
     7261 gctcgccatg tagaggatgc cggcgtcgct cttggcctcg ataatgccat gacgccaagg
     7321 cttgaggttt tgcgccaacg cgccgcccag tgcgactggc accgccagca ttgtgcagaa
     7381 cagcagcccc catgagcgtt tgcagaccat catgcgcgcc tcccatggtt cgtatgttcc
     7441 ggccttttcg gcgttaggga attaaagcat tttaccgtca ggctggccat tcggtacggc
     7501 atctcccgaa ttcagatttg ctgcgcccaa tccaggctgc gcttgggcag gcggggaggc
     7561 ccgcggtccg gtcgcgccgg gcaccggttt ccatttggcc attgttggat tactcttgcc
     7621 ggaaagcccc actgcggagg aacaccatgg cgcaaaaatt cgccctcaat gtcaacggca
     7681 aggaccacac agtcgatgct gatccggaca tgccgctgct ttacgcgctg cgtaacgaca
     7741 tcggcctcaa caatccccat tttggctgcg gcctcgcgca atgcggtgcc tgcacggttc
     7801 atctcgacgg ccaggcgatc cgttcctgcg tgacgccggt gtcggcggtg ggcaacggca
     7861 aagtggtgac gctcgcgggc ctcggcacgc ccgagaagcc gcatccgctc cagaccgcgt
     7921 atgtggaaga gcaggtgccg cagtgcggct actgcatcaa tggctgggtc atgacggccg
     7981 ccgccttctt gcgggacaac aagaagccca ccgaggcgca gatcaagacc gcgctcgaag
     8041 gcctgaaatg ccgttgcggg acccacatgg gtatcctgcg cgccgtcaag cgtgccggcg
     8101 agatgatggg ttgagggagg atgtcatgac gagatttgaa aaacccgccg ccttctcccg
     8161 ccgcgccatg ctcaagtcgg gcggcgcgct cgtggtttcg atcggcacgc cgatcggcct
     8221 cgataccgtg ctgggcataa gcgaagccaa tgcccagggc gccggccaac tggccgcggc
     8281 cgtcaagccc ccgctcaccc cggaccaact ctcctcctac atcgcggtga atggtgacgg
     8341 caccgtggcg gccttcttcg gcaagatgga catgggccac ggcataacgg tcgccattgc
     8401 ccagatggtg gccgaggaac tcgacgtccc gttcaaagcc gtcaagatgt atctcgccga
     8461 caccgccacc agcgtgcacc agggtggtgc ttcgggctcg accggcattc agttgggtgg
     8521 caagcagatg cgcatggcgg cggccgaagc gcgccgcgta ctggtcgaga tggcggccga
     8581 gagactctcg gttccggctg accagttgac tgtggtcgac ggcgtcgtgc agtcgaagac
     8641 cgatgccaca aagaaggcat cttacgcgga actgatcggc gggcgttact tcaacgtccc
     8701 actcgaatgg aacaagcagt acggcaacac gctctatgcg cccggcaagg cgcagccgaa
     8761 gaagccaagc gaatacaaaa tcgtcggcag gccgatcaaa cgcgaggacg tggccccgaa
     8821 agtgttcgcg caagaggact tctgcaccga tgtcaagttg cccggcatgg tgcatgcccg
     8881 catgctgcgt cccgcggtcg ccggcagtgt cccggtgaaa gtcgacgaga gttccatcaa
     8941 ggacatccct ggcgcccgca tggtttggca gaacgccttc ctgggggtgg tggcagacaa
     9001 ggaatgggac gccatccagg ccatgcagaa gctcaaggtg gaatggtcgc aggtgccccc
     9061 gccgttcccg ccccaggcgt cattgtacga ccacatccgc aagtccacgg tgcgcaagcg
     9121 ctccgttgac aaggagaacg gcaatgtgga tgaagccttc aaggccgccg ccaaggtaat
     9181 cgaggcggaa tacgagtggc cgttccaatc ccacgccggc atggggccgg cttgtgcatt
     9241 ggtcgacgtc aaggacggct tcgcaacctg ttacaccggc agccagaagt cgcatttcgt
     9301 ccaggccggc attgcggcga cgcttgagct gccgctggag aaagtccacg ccatatgggc
     9361 gacaggcccc ggcagctacg gccgcaacga tgctgacgac tgcgccatgg atgccgcggt
     9421 gctgtccaag gcggtcggca aaccggtacg gctgcaatac atgcgcgagc agggcacggg
     9481 ctgggatccc aaggggccgg cgtcggtcca cagggcgcgc atggccttcg atgcggccgg
     9541 caacatcacg gcgtatgagt tcaccagcaa gggcttctcg cggatcgacg tcgacaccaa
     9601 cggcggcaag ccacaggaca cgctcgcggg tcatacccgc ggcgtcgcgc tgaaatccgg
     9661 cgacggattc ggcgtgccgg ccgagtccta cgagttcccc aacaagcggc tggcgtggga
     9721 gaccattccg ccgctgctcg accgtgcctc gccgctgcgc tcatcgcatt tacgcgatcc
     9781 ggtcggtccg caaatccact tcgcgagcga atccttcatg gatgaagtgg cggccgcgct
     9841 taatctcgat ccgatcgagt tccggcttag gcacctcaag gacccgcgcg acatcgcggt
     9901 cgttaaggcg gcggccgaga aggccggctg gcagccgcgt ccgtcaccgc agcgccagac
     9961 cggcgtgaag gtcaacggtc gcggcattgc ctatgcgcaa cgcaacggca cccgcgtggc
    10021 ggtgattgcc gaggtagagg tcgatcgctc gtccggcaaa atctacgccc gccgcttcgt
    10081 ggtcgcccat gactgcggcc aggtgatcaa tccggacgga ttggccaagt gcatcgaggg
    10141 caacatcgtg cagggcatca gccgcaccct gtgggaggag gtcaagttca gcgataagac
    10201 cgtgaccacg gtggactgga tcagctaccc gatcctcgac atcaccgaga cccctgataa
    10261 gatcgaaacc gtgctgatcg accatccgga aatcgcccca tccggcgccg gcgaaccgtc
    10321 gatccggccc gtcgccgccg ccatcgccaa cgcgatcttc gacgccaccg gcgtgcgcat
    10381 gcgccgcgtg ccgttctccc cggaccgcgt caagcaggcg atggcgtgag aggccgcacg
    10441 gttcagtgcc atgagacgga gggccggtcc tgcgggctgg cccttttcat tcatcagcat
    10501 tcgtgattta ccggcaagcc ataattattg gctcgtcatg cccggccctg tgccgggcat
    10561 ccacgtctag cagcacttca agctggcaag acgaggatgg ccgggacccc accatgccta
    10621 acttagcgcc tattggggac aagaccggcc atgaccccgc atgatcgatg ggggcgttgg
    10681 tggacctact cgaagctgcc gtgatcggca ccggctggtg cggcggcatc cgcgccgaaa
    10741 ccttggcacg ctcggcgttg tgccggaagc tgcatatttg cgaaattcgc cccgaccggc
    10801 ttgcggaagt caaagccctc accaatccgg cgagcgcaac gctcgactat caggacatcg
    10861 tccgcaatcc cgacatcagc gtcgtgtata tctgcacgac gcccgagcac actcactttc
    10921 cgatcacgcg cgactgcctg cgcgccggca agcacgtgct gttggaaaag ccgatcgcca
    10981 tggaactgtt cgaggcggac gaactgatcg caactgccaa gcgcaacaac gtcaagttca
    11041 ccatcgggta ttcgcaacgc ttcaacgcta agatcgccta cgccaagaaa aagattgccg
    11101 acggcacgct cggcaagccc gtgtccgtca tggtgagccg gcatatcacc cgcagcctcg
    11161 gcaagcggat cgcgggccgg acgcgcctgt cgcccgccgc aatggagtcg actcacgacc
    11221 tcgatttcgt gttctggctg ctggagcctg caaagccggc gcgggtctat gcgcaagggg
    11281 cctacggctt catgaaggac atcaacggtt cgttcgacat catgtggagt accgtgacca
    11341 tggacgatgg caccttggtg gccatcggcg gcggctggaa cttgccgccg agctatccga
    11401 actactgcgc cacctggatc gagatcaccg gcaccgaggg ttcgcttttc ctcgatgaca
    11461 ctcagcgcga caactggctc aacaccgttg cggagggcac gcggtttccc atgtccacca
    11521 tgccgggcga gcaggtcgac cacgtgttcg ccggccagat gggaccggag acgctgcact
    11581 ttctggagtc agtgatgctc gaccggccac ccatggtgtc gcccgagggc gcgcgccgcg
    11641 tgatggaatg ctatctggcg gcggatttgt ccgcggaatg gggcgagccg atcgatgtgc
    11701 cgatgaacaa ccaggcgctg gcggccgtgc aggatttgta taagaagttc agggcgccgg
    11761 tgtagtgata ggcgcgcagc gtgtggcctg gattgagcgc agcgaaatcc gggagaggct
    11821 gtcggcgcaa tttcgctgcg ctcaacgcgg gctacgggct cacaaaataa aactcaccgc
    11881 ccccatcgcg cccagctcat gagcatcgag aatcgcgcgc cgctcagcga tcttcagtac
    11941 cccggcgatc cggcgcagct tgtggcgata gtggccgaca aattcgcgca ctggctcgcc
    12001 gcggcgatag cgatagacca cgaaattggc cgcaaccccg atggtgtcgc cgtctatgcc
    12061 aatgatccgt acattggtga tcagacgccg cgtgcgcgac ggcggatatt cggcgtggca
    12121 gttggggtct ttgaggcgga tcaggcgctc gcgcaggcgc acgatgtcgt ccgcgatggt
    12181 gaacagagtg aaccggtgat cggcgttcgg ctggtcgtta ggcggaacat aataggcggc
    12241 atcgtcagtc agcagcgcga gccagtcgtc gagcttccag ttgtcgagca gatcggcctc
    12301 gtgaaacaga aagtcttcga tctcggcccg cgaaaccgtc gcggcctcat ccagcggctt
    12361 gttcacccgc gcccctccat cagctcgttc cagcgccgcc agaacacgcg tagatgctct
    12421 tcgtcggtgt tggtctgctc gttcttgccc atgccgcgcg agagatcgtt ccacggcact
    12481 tcgcgccagc ttgcatagcc ctgctgggcg ttctccagcg ccgcaacgtc gtcgggcgtc
    12541 gcaaagccgc cggggccgta gaaggtcagg aacgcatgga ggcggcgggc ccgctgcgtc
    12601 tcggtctcct ccactgggcc gagcgcccag gcggtgacat gcatgaggtc gggagcgaca
    12661 ggcgtgaagt tgcgcactgt cacggacgag ccgtcattga tgacgagatt gggaaagatc
    12721 gcgagattgc ggttggtgtc ggcaatgcgg gccgcgcgtg cctcgccgag gcgagcgacc
    12781 aactcggccc ggatcgcctc gatgtcggcc ttggcgtcct cgccatagac cgaaatccac
    12841 cgcgccaccg gccggccgcg ataattcgga ttgtcggtgg tgaggtggcc gttgccgagg
    12901 tccttaccca ggcccttggt gggcaacaac agccccgagc ccttcggcgg gctcatgctg
    12961 acgccggaat tgcgcatgta gttgagccag gtcgcgtgcg tagcgatcag gtgataatcg
    13021 tcgacgctgt tttccaccaa cagcttccag ttggccttga tgtcgtattc ctggacgccg
    13081 gaaataatct ccatgcggcc ggacggtgac tggtcgacca caaggtcgat ataggccttg
    13141 gcgccggcca gataggtgtc gagatcgacg gcgtcgcgat cgaaattggc gaagtagaaa
    13201 tccttatagg attcaagcct cggcaccggc gcgagcccca tggcggattt atcgaagctc
    13261 ggcggatagg agtcctcgtc cggcacgccg cgcagggtgc cgtcggtgtt gtaggtccag
    13321 ccgtgataca tgcagtagaa accgcgtgca ttgccctcgc gctcccggca cacgacggcg
    13381 ccgcggtggc ggcatgagtt gatcaggcca cgcacctgtc cgtcacgatc gcggcaaaag
    13441 atcatcggcc ggcctgcgac cgagcacgtc ttgaaatcgc ccgggttggg cacctgcgag
    13501 gcgtggccga tgtaaatcca acaacgatcg aagatagccc gttgctcgcg agcgaaaatc
    13561 tcgcgcgaca cgaacacctc gcgattgacc gagaaggata gattctcgcg gctctcgcgc
    13621 actagcggtc ggccattgcc gttatggctt tcgggaccgg tgtggtgacc ggcatgatga
    13681 tcgttcatgg cgggggctcc tgaccgggag gattatataa cgggcggcgg gagactgcag
    13741 tgttggggcg tgttgtgtag gccgtatttt cccgtccctc gccggcgggc acggcaatcg
    13801 ttatttggga gggcgcagcc ttcacctctg cgccgcgtgc ggggagaggt cggatcgcgc
//
LOCUS       DATILV010000157         7869 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2592784, whole genome shotgun sequence.
ACCESSION   DATILV010000157 DATILV010000000
VERSION     DATILV010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7869)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7869)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7869
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2592784"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            206..1372
                     /locus_tag="VLJ17_03535"
     CDS             206..1372
                     /locus_tag="VLJ17_03535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002724150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HSV22081.1"
                     /translation="MRIVDIRETVIPLKSNLKNSSFDFSEMTTSVVAVITDIVRGGRP
                     VVGFAFNSTGRYACGAQMRERFIPRILRADPVTLVDDDGDNLDPARLLAVMMAREKIG
                     ADAERSIGIGTIEVAVWDAVAKIADRPLHHVLAERYSDGQLLDKVFCYVGGGWYWPGQ
                     TIADLQDEMRRHVAAGYTMVKMKVGGLPLDEDCRRIEAVLEVLGSERHLAVDANGKFD
                     RAAALAYAKALKPFGLKWLEEPCHPLDYALYAEIAAAYDAPLATGENLFSIKDVQNLV
                     QFGGLRAGCDFIQVDPPQAYGIVQYGKTVAMLESEGWSRANLFPHGGNQMSLAITAGF
                     GLGGAESYPGVFGAFGGFADDAKVENGFITLSDRPGIGFEGQAALYRLMRSLTE"
     gene            complement(1452..2132)
                     /locus_tag="VLJ17_03540"
     CDS             complement(1452..2132)
                     /locus_tag="VLJ17_03540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007611354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HSV22082.1"
                     /translation="MALHLTIGNKNYSSWSFRPWLALKVAAIPFEETVIPIHYPGSKE
                     KFLEHSPAGKVPILKDGAVTVWESLAILEYVAEKFPDAALWPRDAAARAHSRTIASEM
                     HAGFVPLRRQCPMNMWRPVKKLELSAETAANVARIDAMWSDCRARFGGDGPFLFGRFG
                     GADAMYAPVVSRFHTYAVEVSAVSSAYMQTMMALPAWQEWYDAALKEEWLLAEDEVDW
                     PTVLRVNS"
     gene            complement(2197..2607)
                     /locus_tag="VLJ17_03545"
     CDS             complement(2197..2607)
                     /locus_tag="VLJ17_03545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HSV22083.1"
                     /translation="MAQNIVLHVEDMVAAAEREIETLEVLDAIRLHGSGDVTFIDLRD
                     IRELNREGRVPGAFHCPRGMLEFWLDPASKYHKQAFAADKKFVFFCAGGARSALAAHT
                     AQRMGLKPVAHIGGGFGAWRDAGGPVEQPDVTTK"
     gene            2738..3481
                     /locus_tag="VLJ17_03550"
     CDS             2738..3481
                     /locus_tag="VLJ17_03550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF599 domain-containing protein"
                     /protein_id="HSV22084.1"
                     /translation="MNFLPALDLAALAYFVMAWIGYAVAVERGQQRHGGLNARMHRYR
                     EVWMRRTLSRDARMVDMQIMAALQNGTAFFASTTLLAIGGTLTIMRSTGEVLTVVATL
                     PFGIASTPAQWEMKTIGLIVIFIYAFFKFAWSYRLFNYVAIMLGAMPFASDKHTPEAE
                     CHVLRTTKLFQSAGQNFNRGQRAFFFALGYLGWFAGPWILFASTTAVVIVMWRRQFVS
                     SAQRALMTELPAQAPSPVMAPETAPSSAP"
     gene            complement(3444..4238)
                     /locus_tag="VLJ17_03555"
     CDS             complement(3444..4238)
                     /locus_tag="VLJ17_03555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HSV22085.1"
                     /translation="MFFVLSKILGFFALPSNLMLALGLIGIALMRTRFAQVGRGLVTG
                     SIVLFAGFGLLPLGKALILPLEERFPRWDAARGPPDGIVVLGGAIDPEFVTARGVPDL
                     NEAAERVTVVAELARKYPSARILYSGGNGRLVFQGGTEAQFAGAMIETFGVPESRLIL
                     EDQSRNTAENAIFSLRLAMPKSGQRWLLVTSAFHMPRSMGAFRKAGFAVEAYPVDYRT
                     RGAADLLIPFDDMASGLRRTDTAAREWIGLVAYWLTGRSSALFPGP"
     gene            complement(4253..4954)
                     /locus_tag="VLJ17_03560"
     CDS             complement(4253..4954)
                     /locus_tag="VLJ17_03560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease activity regulator RraA"
                     /protein_id="HSV22086.1"
                     /translation="MSSATFDVLRKVTTATITTMLLKKGIRRCWMHGPKPLVLGGPRL
                     IGPAFTLRFVPAREDLATPESWGKPISTRAAIEAMPEGAIAVADAMGIETAGIFGDIL
                     CARMHKRNVTALVTDGALRDRTGVLASGLAVWCAGMAAPASVNGLTFVGWNEPIGCGG
                     AAIFPDDIIVADDDGAVVIPKDLLEFVAHEGAEHELYESWVFTEVEKGVKLPGLYPPN
                     DEAKARYADWRKRPG"
     gene            complement(5297..6121)
                     /locus_tag="VLJ17_03565"
     CDS             complement(5297..6121)
                     /locus_tag="VLJ17_03565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008961051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HSV22087.1"
                     /translation="MDIPVVAAGGARIPVIGLGTWDLRGRACARVVEQALRLGYRHVD
                     TAEMYGNEREVGEGLRASGVRRNDVFITTKVWQDHLAPAEFERATKESLAKLRLSEVD
                     LLLIHWPSPRIPLAETMGALCRMKQAGFARHIGISNFTVPLIEEAMRLATEPLVTNQI
                     EWHPYLDQSKVVAACRRQGLAVTAYSPIARGRAGGDAQLRLIGMHHRRTAAQVSLRFL
                     VQEGAVVIPRTAKRERLEENMAIFDFELDPAEMDEIRGLARRGERVVDWSGAPNWD"
     gene            6339..>7869
                     /locus_tag="VLJ17_03570"
     CDS             6339..>7869
                     /locus_tag="VLJ17_03570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018267219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HSV22088.1"
                     /translation="MTDITLTGTISVSSSPKPKLDQPINPLTLILFLSVLAAGFLFVA
                     YSLYVDVDETGTKVTTYLPFVLLVVALVIALGFEFVNGFHDTANAVATVIYTHSLPAP
                     IAVVWSGFFNFLGVLISSGAVAFGIVSLLPVELILQVGSAAGFAMVFALLIAAIIWNL
                     GTWYLGLPASSSHTLIGSIIGVGVANALMRGLDGTSGVDWAKATEIGQALLFSPVVGF
                     CAAALLLIVIKFVIRNPALYSEPKGSQPPPWWIRGVLILTCTSVSFAHGSNDGQKGMG
                     LIMLILIGTVPTAYALNRAMPASQMTEFRITSTAAATVIAQKAAGYNVLGDTRPAVTL
                     YVSQRKINEGTYPSLAVLVKEISAQVAQYSTLAKVPAEAVGNTRNDMYLASEAIRFLM
                     KDKENDLSKDDIAALNSYKKSLDNATKFIPTWVKIAVAIALGLGTMIGWKRIVITVGE
                     KIGKTHLTYGQGASAELVAAATIAAADAYGLPVSTTHVLSSGIAGTMAANGSGLQWST
                     VR"
BASE COUNT         1482 a         2557 c         2358 g         1472 t
ORIGIN      
        1 cgtagaaagg taacaggggc aaaacgcgcg gcggtcgatt cctcatcgcc gggcgtgtcc
       61 cggcgatctc gatcaggaca gcacagcgcg cgattatcgc gatggccggg acaagcccga
      121 caatgaccaa atacgaatcg ccacgagttt tgcccccgtt accgcgcggc agagtatcac
      181 cctcgcccaa ccccggatag atcccatgcg catcgtcgat atccgcgaaa ccgtgatccc
      241 gctcaaatcg aacctcaaga attcgagctt cgacttctcc gaaatgacga cgtcggtcgt
      301 cgccgtcatc accgatatcg tgcggggcgg ccggccggtc gtgggctttg cgttcaattc
      361 gaccggccgc tacgcttgcg gggcgcagat gcgtgagcgg ttcattcccc gcatcctgcg
      421 ggctgatccc gtgacgctgg tcgacgacga cggcgataat ctcgatcccg cacgtttgtt
      481 ggccgtgatg atggcgcgcg aaaaaatcgg cgccgacgcc gagcgttcga tcgggatcgg
      541 caccatcgag gtcgcggtgt gggatgcggt ggccaagatc gccgaccggc cgcttcatca
      601 cgtgctggcc gagcgataca gcgacggcca gctgctcgac aaggtatttt gctatgtggg
      661 cggcggctgg tactggccgg gccagaccat cgccgacttg caggacgaga tgcgccgcca
      721 tgtcgcggcc ggctacacca tggtcaagat gaaggtcggc ggcctgccgc tcgacgagga
      781 ttgccgccga atcgaagcgg tgctggaggt gctgggaagc gaacgccacc tcgcggtcga
      841 tgccaacggc aagtttgatc gcgccgccgc gctggcctac gccaaggcgc tcaagccctt
      901 tggtctcaaa tggctcgaag agccgtgcca tccgctcgac tacgcgctct atgcggaaat
      961 cgccgcggcc tatgatgcgc cgctggcgac cggtgagaac cttttttcca tcaaagacgt
     1021 gcaaaacttg gtgcaattcg gcggcctgcg ggcgggctgc gatttcattc aggtcgaccc
     1081 gccccaggcc tacggtatcg tccaatacgg aaaaaccgtc gccatgctgg aatccgaggg
     1141 ctggagccgc gccaacctgt ttcctcatgg cggcaaccag atgtcgctcg ccatcacggc
     1201 tggtttcggc ctcggcggcg ccgagtccta tcctggtgtg tttggggcat tcggtggctt
     1261 tgccgatgat gccaaagtgg agaatggttt catcacactg tcggaccggc ccggcatcgg
     1321 atttgaaggg caagccgcgc tataccggct gatgcgatcg ctgacagagt gaggtgggaa
     1381 cgcgggcaac cgcccgctct ccctatgtat aacaaagggc gggcgagacg ccgccctcgt
     1441 cttcgcccac cctacgaatt cacccgcaac accgtcggcc aatccacctc gtcctcggca
     1501 agcagccatt cctccttcag cgcggcatcg taccattcct gccacgccgg cagcgccatc
     1561 atggtctgca tataggcgga ggacaccgcg ctgacctcga ctgcgtaggt gtggaagcgt
     1621 gacaccaccg gcgcatacat ggcatcggcg ccgccgaagc ggccgaacag gaacggcccg
     1681 tcaccgccga agcgggcgcg gcagtcggac cacatagcgt cgatgcgcgc cacattggcg
     1741 gctgtctcgg cgctcagctc aagctttttc accgggcgcc acatgttcat cgggcactgg
     1801 cggcgcagcg gcacaaagcc ggcgtgcatc tcgctcgcaa ttgttcggga atgcgcccgg
     1861 gctgccgcgt cgcgcggcca cagtgcggca tcggggaact tttccgcaac atattccagg
     1921 atcgcgagcg actcccatac cgtcacggcg ccatccttaa ggatcggcac ttttccggca
     1981 ggcgagtgct ccaggaattt ttccttgctg cccggataat ggatcgggat cacggtttcc
     2041 tcgaagggga tcgccgcgac cttgagggcg agccacggcc ggaacgacca tgacgaatag
     2101 ttcttgttgc cgatagtgag atggagagcc atgacggttc caaagggcga tgttggacgg
     2161 caaagcccga ggttgcttcc agtcgacgaa aaggcgctac ttcgtcgtaa cgtccggctg
     2221 ctcgacgggc ccgccggcgt cgcgccacgc gccgaaacca ccgccgatat gggcgaccgg
     2281 cttcaaaccc atgcgctgcg ccgtgtgggc ggcgagcgcc gagcgcgcgc cgccggcgca
     2341 gaagaacacg aatttcttgt ccgccgcaaa cgcctgcttg tgatacttgc tggccgggtc
     2401 gagccagaat tccagcatgc cgcgcgggca atggaacgcg ccgggaacgc gcccctcacg
     2461 gttgagctct cggatgtcgc gcagatcaat gaaggtcaca tcgcccgaac cgtgaagcct
     2521 gatggcatcc aacacctcca aggtttcaat ttcgcgctcg gcggctgcca ccatgtcttc
     2581 cacgtgcagg acaatgtttt gggccatcac ggctctccgg tcgtgtggca atgtggcaga
     2641 gcggcggcga cggtcaagcc cccaggcgga ttggatcatg acaaggtttg ctccggtctc
     2701 aaaccggggt caccacgccg aatcaaggag ccgtccaatg aacttcttgc ctgcactcga
     2761 tctcgccgct ctcgcctact tcgtcatggc ctggatcggc tatgcggtcg cggtcgaacg
     2821 cggtcagcag cgccatggcg gcctcaacgc ccgcatgcat cgctatcgcg aggtgtggat
     2881 gcgccggacg ctgagccggg atgctcgcat ggtcgacatg cagatcatgg cggcgctgca
     2941 gaacggcacc gccttctttg cctcgacgac cttgctggcg atcggtggca cgctgaccat
     3001 catgcgctcg actggcgaag tgctcacggt ggtagcgacg ctgccattcg gcatcgcgtc
     3061 gacgccggcg caatgggaga tgaaaaccat cggcctcatc gtgatcttca tctatgcctt
     3121 cttcaagttt gcctggtcct accgcctgtt caattacgtg gccatcatgc tcggcgcgat
     3181 gccgttcgcc agcgacaagc ataccccgga agccgaatgc cacgtgctcc gcactaccaa
     3241 gctgttccaa tcggcgggac agaatttcaa ccgcggccag cgcgctttct tcttcgcgct
     3301 cggctatcta ggatggtttg cgggcccgtg gatcctgttc gcctcgacca ccgctgtggt
     3361 cattgtcatg tggcgtcggc agttcgtctc ttcggcgcag cgcgccctta tgaccgaact
     3421 gccggcccag gcgccatccc cggtcatggc cccggaaaca gcgccgagct ccgccccgtg
     3481 agccagtagg ccacgagccc gatccactcg cgggcggccg tgtcggtgcg gcgcagcccg
     3541 gacgccatgt cgtcgaacgg aatcagcaga tctgctgcac ccctggtgcg gtagtcgacc
     3601 gggtaggcct cgaccgcgaa gccggctttg cggaatgctc ccatcgaccg cggcatatgg
     3661 aaggcggagg tgaccagcag ccatcgttgg ccggacttgg gcatcgccag ccgcagggag
     3721 aagatcgcgt tctctgcggt gttgcgcgac tggtcctcca ggatcaaccg actctccggc
     3781 acgccgaaag tctcgatcat cgcgcctgcg aattgcgcct ccgtgccgcc ctgaaacacc
     3841 agccgtccat tgccgccgct atagaggatg cgggccgacg gatatttccg ggcgagttcc
     3901 gccacgacgg tgacgcgctc ggccgcttcg ttgagatcgg ggacgccccg cgccgtgacg
     3961 aattccggat cgatcgcgcc accaagcact acgatgccgt caggcgggcc acgtgctgca
     4021 tcccaccgcg gaaatcgctc ctccagcggc aagattagcg ccttgccgag tggcagcagt
     4081 ccgaacccag cgaacagcac gatcgatccg gtcacaagac cgcgcccgac ctgtgcgaaa
     4141 cgcgtgcgca tcaaagcgat cccaatgagc ccgagcgcca acatgagatt ggacggcagt
     4201 gcgaaaaatc ccagtatctt ggagaggacg aaaaacatcg gcctacgcca gctcaaccgg
     4261 gtcgcttgcg ccaatccgca tagcgcgcct tggcttcgtc attcggcgga tagaggcccg
     4321 gcagcttcac gcctttctcg acctcagtga acacccagct ctcatagagc tcatgctcgg
     4381 cgccttcatg ggcgacaaat tccaataaat ccttcgggat cactacagcg ccgtcgtcgt
     4441 cggccacaat gatgtcatcg ggaaagatcg cagcgccgcc acatccgatc ggctcgttcc
     4501 agcccacgaa agtgagaccg ttgaccgacg ctggcgccgc catgccggcg caccataccg
     4561 caagaccgct cgccaacacg ccggtgcggt cgcgcaatgc gccgtcggtg accaacgccg
     4621 tgacgttgcg cttatgcatg cgggcgcaca ggatgtcgcc gaaaatgcct gcggtttcaa
     4681 tccccatggc gtcggccacg gcgatcgcgc cctccggcat cgcctcgatg gcagcgcggg
     4741 tggagatcgg tttgccccag ctttccggtg tcgccaggtc ttcgcgcgcc ggtacgaaac
     4801 gcagcgtaaa cgcgggaccg atcagccgcg gcccacccag caccagcggc ttcggtccgt
     4861 gcatccagca ccgcctgatg ccctttttga gcaacatggt ggtgatggtg gcggtcgtga
     4921 ccttgcgcaa aacatcgaag gtggcggaac tcatggaaac cctcgtggtt tgaaagccga
     4981 agcctcgcat accacctctg cccgctgact gggagaggtc ggatcgcgcg tctgtgcgct
     5041 tgaacgccaa ttcgagtggt gtcgggcccc agaagatttt ttgatgcttg ttcaagcaga
     5101 ttgcctcgac tgggagctgt ccaaaagcaa taacgcctca aaggtctccg cgtcctgaaa
     5161 atacctccca atgctcgcca agcaggttcg tgaagatcaa aattgtaatt ccgtgccgtg
     5221 cagcccgcgg atgcggatgt agagactggc gtcgctggcg ggcctaccct ccaggaaaac
     5281 ggggcgggac taaacctcaa tcccaattcg gcgcgcccga ccaatcgacc acgcgctcac
     5341 ctcgacgcgc gagcccgcga atctcgtcca tttcggcggg atcgagctca aaatcgaaga
     5401 tcgccatatt ctcctccagg cgctcgcgct tggcggtccg cgggatcacg actgcgcctt
     5461 cctggacgag aaaccgcagg ctgacctgcg cggccgtcct gcggtgatgc atgccgatca
     5521 gccgcagttg cgcatcgcct ccggcgcggc cacgggcaat cgggctgtat gcggtgaccg
     5581 ccaggccttg acggcggcat gcggcgacca ccttcgattg gtcgagatac ggatgccatt
     5641 cgatctggtt ggtgacgagc ggctcggtcg ccagccgcat cgcctcctcg atgagcggta
     5701 cggtgaaatt cgaaattccg atgtgtcggg caaagcccgc ctgcttcatc cggcacagcg
     5761 cacccatggt ttcggccagc ggaatccgcg ggctcggcca gtggatcaac agcaggtcga
     5821 cctcggaaag gcgcagcttg gccaggctct ccttggtggc acgctcgaat tcggcgggcg
     5881 caagatgatc ctgccacacc tttgtggtga tgaagacatc gttgcgcctc acaccggacg
     5941 cgcgcaatcc ctcgccgacc tcgcgttcgt tgccgtacat ttcagcggtg tcgacgtggc
     6001 ggtaaccgag ccgcaacgcc tgctcaacca cgcgggcgca ggcgcggccg cgcagatccc
     6061 aggtgccgag tccgatcacc ggaatgcggg ccccgcccgc tgccacgaca ggtatgtcca
     6121 tgattttaac ctgagaagat cgctccaacg caatcaaatc tgtgccaatg aggtcgagcg
     6181 ccttgttctc cttccaacgc cccggcccac cacatgcctg ctaatagcac ggttttcaag
     6241 gacgaccgag cacgtgccca ggccagccaa ttaccgtcat cgagcggtca taccaattcg
     6301 ccacatttga acatcgagac atatacgcgg gacttatcat gaccgacata acattgacgg
     6361 gaacgatcag tgtatccagt tcaccgaaac cgaaactcga tcagccaatc aacccgctga
     6421 ccttaattct ctttcttagc gttctggcgg ccgggttcct gttcgtcgcc tatagcctct
     6481 atgtcgatgt ggacgagacc ggcaccaagg tcacgaccta ccttccattc gtcctgttgg
     6541 tcgttgcgct cgtcattgcg ctcggttttg aattcgtcaa tggcttccac gacaccgcaa
     6601 acgcggtcgc aaccgtcatt tatacgcatt ccctgccggc gccgatcgcg gtggtatggt
     6661 cgggcttctt caacttcttg ggcgtgctga tctcctcggg cgcggtagca tttggtatcg
     6721 tgtcgctgtt accggttgag ctgatcctgc aggttggcag cgcggcgggc ttcgccatgg
     6781 tgtttgcgtt gctcatcgcg gccatcatct ggaatctcgg cacttggtat ctcggcctgc
     6841 cggcttcaag ctcgcatacc ctgatcggct ccatcatcgg cgtcggtgtc gccaacgcac
     6901 tgatgcgcgg cctggacggc acgtccggcg tggactgggc caaagccacc gaaatcggtc
     6961 aagctctgct gttttctccg gtcgtcgggt tctgcgccgc ggcgctgctg ctcattgtca
     7021 taaagttcgt catccgcaac ccggcgctct attcagaacc caagggcagt cagccgccgc
     7081 cgtggtggat ccgcggcgtt ctgatcctca cctgcacgag tgtcagcttc gcccacggct
     7141 ccaacgacgg ccagaagggc atgggcctca tcatgctgat cctgatcggc acggtgccga
     7201 ccgcctatgc gctcaaccgc gccatgccag cgagccagat gacggagttc cgcatcacgt
     7261 cgacggccgc cgccaccgtc atcgcgcaaa aggcagccgg ctataacgtg ctcggtgaca
     7321 cgcgccccgc cgtgacgctc tatgtgtcgc agcgcaagat caacgagggc acctatccgt
     7381 cgctcgcggt cctggtgaag gagatcagcg cccaggtcgc tcagtacagc acgctggcga
     7441 aagtaccggc ggaggccgtc ggaaataccc gcaacgacat gtacctcgcc tctgaggcga
     7501 tccgcttctt gatgaaggac aaggagaacg acctttccaa ggacgatatc gcggcgctca
     7561 acagttacaa gaagtccctc gacaacgcga cgaagttcat cccgacgtgg gtcaagatcg
     7621 cggtcgccat tgcgcttggt ctcggcacca tgatcgggtg gaagcggatt gtgatcacgg
     7681 tcggggagaa gatcggcaag acccatttga cctacgggca aggcgcgtcg gcagaactcg
     7741 ttgccgccgc gactattgcg gctgcggacg cctacggtct tccagtatca acaacccatg
     7801 tgctctcgtc cggtatcgcc ggtaccatgg cggccaacgg ctcgggcctg caatggtcaa
     7861 ccgtgcgca
//
LOCUS       DATILV010000158         7968 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2592968, whole genome shotgun sequence.
ACCESSION   DATILV010000158 DATILV010000000
VERSION     DATILV010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7968)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7968)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7968
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2592968"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..537
                     /locus_tag="VLJ17_03575"
     CDS             <1..537
                     /locus_tag="VLJ17_03575"
                     /inference="COORDINATES: protein motif:HMM:NF024739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSV22089.1"
                     /translation="YDDLLDPKWKGKLGIEADDSDWFGALMGQLGEERGLQLFRRIAT
                     TNGISVRKGHTLLANLIISGEVPLAITTYAYRVEQLKKSGAPVDWFTIPPVIARFEGV
                     GVARRAPHPDAAVLFFDFMLTDGQQLLRNREYFPASREGRPLPDGIMVSFLDPVRDLD
                     ESQKWSKSYRDIIIKQAR"
     gene            559..1113
                     /locus_tag="VLJ17_03580"
     CDS             559..1113
                     /locus_tag="VLJ17_03580"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSV22090.1"
                     /translation="MGNQQHDPDRERVFVRALTGAYSLKQELDRLRGLPRVIKGKDLK
                     LDGGPQHFSRHYVEPEDGRTQTLHIHLEEYAPGGKTQKHGHVNEAAFYILDGAGYEIH
                     DGIRYDWKAGDVAIVHNNCVHQHFNASEREPARALVIKTKPMYLFMNMLFQHTVEKRP
                     KTPSPTQGNFVPRDDEEDHNHPTD"
     gene            1308..1922
                     /locus_tag="VLJ17_03585"
     CDS             1308..1922
                     /locus_tag="VLJ17_03585"
                     /inference="COORDINATES: protein motif:HMM:NF014136.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22091.1"
                     /translation="MAWDEAKAWMKGTLNQRLYEGLLEHATELPARLAGRKKILHPED
                     MPWEMSRQGLLKHLLNEQMNTRMETVDAYMQVIPPGSRSGKHRHLAEECLYVLEGHGY
                     DLHQDCDVEITDSYEWKPQAEIKRYEWEAGDVIYVPPCTIHQHFNGDPRRPARLISCI
                     NRIYKNSGLNDLMQIEDAPEYDPNVVLTAELVKRYLAVPVSEPA"
     gene            2135..3190
                     /locus_tag="VLJ17_03590"
     CDS             2135..3190
                     /locus_tag="VLJ17_03590"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSV22092.1"
                     /translation="MCRRWAALFTLFALAVPEARADAVADFYKGKLIKVVVGFASGGG
                     YDVYARLLARHFGKYIPGNPSLVVQNMPGAGGLRAANFIYTAAPKDGTTIGTFSRDMP
                     LLAVLGTNAGVQFDPRKFTWIGSSSSFVDDAYVLIVRADAPATSIAAARRPGGPPLVL
                     AGSAEGAPGNDVPMILRDTIGLNAKVVGGYPDSSTMFLAMERGEVNGRTVDLSTLRTF
                     RSAWLKPDSGMHVLVQFARTTRHPELREIPTARELAPTDEALALIDLAELPYSMARPF
                     AAPPEVPEDRAQALRAAFLATHKDPQYLEEAAKLKIDVSPVGGADMLAMIERIAGASP
                     RIVDHLRKLLAENKGGG"
     gene            complement(3206..4834)
                     /locus_tag="VLJ17_03595"
     CDS             complement(3206..4834)
                     /locus_tag="VLJ17_03595"
                     /inference="COORDINATES: protein motif:HMM:NF006052.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HSV22093.1"
                     /translation="MGTAGELIVDSLVANGIDRVFCVPGESYLGLLDALYGRADIDTV
                     VCRHEAGAGFMAIADARLTGRPGVVCVSRGPGASNAAIALHTAQQDEVPFILMIGQVA
                     ARNVRRDSFQEIDYRQMYGAIAKWCAEVTDPARMAETMLRAIQTATTGTPGPVVIAVP
                     EDVLTAPTHGAPVGPQAMVRAAAVPADVAMLRGWLENAARPLVLCGRSLDRPGGREVL
                     RNFLEQWNLPAVVSFRSQDLLPHKHRLYAGDMGLANPPDQMMVLRQADLLLVLGARLT
                     DITTQGYTYPDLVRPQMRLAHVHADPSAIGTHFAADLAVVCDPQELMAALGAPAQWPD
                     GVARAKWLDALERERRKIVTPRRVDVDDGVPFEDVVALIGQNLPPDAIVTVDAGTFGV
                     PVYRVIPFTPPQRLLAPIAGAMGFGVPAAVAAGLREPARPITCLVGDGGFLMTGNELA
                     VAMERKLPLKVVLSENCSYASIWIQQERDYPGRAIGTMFMNPDFALIGRAFGFDVTRI
                     KSRSDLEILPDVLAQRGPQFVIVRTSLDAVRPTR"
     gene            complement(4952..5566)
                     /locus_tag="VLJ17_03600"
     CDS             complement(4952..5566)
                     /locus_tag="VLJ17_03600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008547508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HSV22094.1"
                     /translation="MPMILRSSPTSPFARKARMAILHLGLADKIELVRADAMNPEDML
                     RRDNPLGKIPTLVTTDGKAIYDSRVILEYLDHMAGGGIIIPDAWPARLGVLTTQAMCD
                     GIMDACVLIVYEARHRPETIRHPPWLDYQRGKVVRALTAFAKQTPDPAHFNVGTLTAA
                     CMLGYLDLRKHVDWRNDFATLVPWLDAFRAKHPEYDATVPPESA"
     gene            complement(5576..>7968)
                     /locus_tag="VLJ17_03605"
     CDS             complement(5576..>7968)
                     /locus_tag="VLJ17_03605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007761916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HSV22095.1"
                     /translation="RLKTSMADKPTSARIGQPVRRREDLRLVTGKGSYTDDVNLPGQA
                     YAVMVRSPHAHARIRAIDIAPAMATPGLLAVLTGRDLLADGLRPIPHKVWSQHPAEIM
                     LREHNGFKTFTAPHYALPSDKVRFVGEAVAMVIATTVAAAKDGAELVETDYDVLPAVT
                     DTLEAARPDAPRLFDEAESNVVVDGELGDRAATEAAFARAAHVVKFETWVQRVTGVPL
                     EPRAAVGEFDPATGRYTLYAGNGGAWRLKDDLATILGVPADQVRVVMRDIGGNFGTRG
                     MIYAEFALVAWAARRVGRPVKWTSDRHEAFLCDYQARDLAVTAELAIDRDGNFLGLRG
                     SNVSNAGAHTTNYSPLQKGVEIMTTIYRIPAAHFRARAVVSNTSPTRPYRSAGRPEVM
                     YVMERLIDLACQEHDFDRVEIRQRNLVKETEFPYKNALGMVYDSGAYHHTMNWALKTG
                     DWDGFPGRRAAARARGKHRGIAVANYIDTATGVARERAEMTVHPDGWIDVVIGTTSQG
                     QGHETTFAQLVNEWYDVPIENVRIITHDTDIVKFGGGAHSGRGMRLASLIMWKATQEI
                     IARGKRVAALLLQSKPEAVAFSGGHFVVGGTDQAIDLFAVSAAMLRRTDLPEELRGQL
                     AATCDEVVPEASYPFGSHLCEVEIDPELGTVKIVKYSAVDDVGRAVNPMIVDGQTHGG
                     IVQGVGQALIEQCFYDARTGQLLSGSFMDYAMPRADMFPFFDTGISEIPTPTHPLGIR
                     PAGEGGTTPALAVTINAIVDALREFGVRHVEMPATPERIWRAIHGKPPRPQTLERK"
BASE COUNT         1555 a         2463 c         2481 g         1469 t
ORIGIN      
        1 tacgacgatc tcctggaccc caaatggaag ggcaagttgg gaatcgaggc cgatgacagc
       61 gactggtttg gcgcgttgat gggccaattg ggggaggaac ggggtctcca gctgtttcgc
      121 cgcattgcca ccaccaacgg aatatcggtg cgcaaggggc ataccttgct ggcaaacctc
      181 atcatatccg gagaggtgcc gcttgcgatc acgacttacg catatcgcgt cgagcaactg
      241 aaaaagagcg gtgcgccagt cgattggttt actattccgc cggtgatcgc gcgctttgaa
      301 ggggtcggcg tcgcgcgacg cgctcctcat ccagatgccg cggtcttgtt tttcgacttc
      361 atgctgacag acgggcagca gctcttgcgc aaccgtgagt actttccagc cagccgagag
      421 ggccgacctc tgcccgacgg gattatggtt tcatttctcg atccagtccg ggacctggac
      481 gaaagtcaga agtggagcaa atcataccgc gacatcatta tcaaacaggc gcgatgatgc
      541 gccctcacga gggaacgcat gggcaaccaa cagcatgatc cggatcggga gcgggttttc
      601 gtacgcgccc tcaccggcgc ctatagtctc aagcaggaac tcgatcggct gcgggggttg
      661 ccgcgcgtta tcaagggaaa ggatctcaag ctggacggtg gcccgcaaca tttcagccgg
      721 cactatgtcg agcccgagga cgggcgcacc cagacgcttc acattcatct cgaggaatat
      781 gcgcctggtg gcaagaccca gaagcacgga cacgtaaacg aggcggcgtt ctacattctc
      841 gatggcgcgg gctacgaaat ccacgacggc attcgctacg attggaaggc cggtgatgtc
      901 gcgattgtcc ataacaactg cgtgcaccaa catttcaatg ccagcgaaag ggagcctgcc
      961 cgcgccttgg tgatcaaaac caagccgatg tatttgttca tgaacatgct gttccagcat
     1021 acggtcgaga agcggccgaa aacgccctcc ccgactcagg gcaatttcgt gccgcgggat
     1081 gacgaagaag accacaatca tccgaccgac tagggcgcat tccaatgaga tcgaatcccc
     1141 tcttcgccgt catgcccgct tgtcgcggca tgacggcttt cgtgcgggca ttcggcaagc
     1201 aagacgagca tggcgtcgac aagcgcggcc aagactcgga agaaatctgt tcaatatggc
     1261 cggaacgcgc tctagggcgc gtccgtaatc acaggaatag ctgaacgatg gcttgggatg
     1321 aagcaaaagc atggatgaag ggcacgctga accagaggct ctacgaaggc ttgctggaac
     1381 atgcgacgga actgccggcg cgcctggcgg gtcgtaaaaa gatccttcat ccggaagaca
     1441 tgccgtggga aatgtcgcgg caaggcctgc tgaaacatct cctgaatgag caaatgaaca
     1501 cccgcatgga gacagtggac gcttacatgc aggtgattcc gccggggagc cgctccggca
     1561 agcaccggca ccttgccgag gaatgcctct acgtgctcga gggccacggc tacgacctcc
     1621 atcaggactg cgacgtcgag atcaccgact cttatgagtg gaagccgcag gccgaaatca
     1681 agcgctacga atgggaagcg ggtgacgtca tttacgttcc accgtgcaca attcatcagc
     1741 acttcaacgg tgatccgcga cggcccgcgc gactgatctc gtgcatcaat cgcatctaca
     1801 agaacagcgg actgaacgac ttgatgcaaa tcgaggacgc gcccgaatac gatccaaacg
     1861 tcgtgctgac ggccgagttg gtgaagcgct accttgcggt cccggtcagc gagcccgcct
     1921 gacggaaaga acattggcgc gccgccaaag tgccgccatg gaataggtac accaccaatt
     1981 ctccaggtgt catgccggtg aacgcgggac ttcagttact ccgcgcgtcg ggtttagtgg
     2041 gtcgcccgcc tttgtgggcg atgacacata tgggtgtctc caccaggacg gattctgctt
     2101 caatttcggg gtaactgaac cggagagata tcaaatgtgc aggcgatggg ccgcgctttt
     2161 cacccttttc gcgctggctg tgcccgaggc acgagccgac gccgtcgccg acttctacaa
     2221 ggggaagctc atcaaggtcg tggtcggctt tgcgtccggc ggcgggtacg acgtctatgc
     2281 gcgcctcctc gcacggcact tcggcaagta cattcctggc aacccgagct tggtggtgca
     2341 gaacatgccg ggtgccggag ggttgcgtgc cgccaatttt atttatactg ccgcccccaa
     2401 ggacggcacc accatcggga ccttttcgcg cgacatgccg cttctcgcgg tactgggcac
     2461 taacgcgggc gtccagttcg atccacgaaa attcacctgg atcggctcgt cgtcaagctt
     2521 cgtcgacgac gcctacgtcc tgatcgttcg ggcggatgcg ccggcgacct cgatcgcagc
     2581 ggcgcgccgt ccgggcggcc cgccgctcgt gcttgccggc agcgccgagg gtgcgcccgg
     2641 caatgacgtc ccgatgatcc tgcgcgacac catcgggctc aacgccaagg tcgtcggtgg
     2701 ctacccggac agcagcacga tgttcctggc catggagcgc ggcgaggtga atggacgcac
     2761 tgtcgatctg tcaacgttgc gaacatttcg ctcggcttgg ctcaagccgg acagcggcat
     2821 gcacgtgctt gtgcagtttg cgcggacgac gcgccacccc gagttgcgcg agattccgac
     2881 ggcgcgcgaa cttgcgccca ccgatgaggc gctggccctg atcgacctgg ccgagctgcc
     2941 ttattcaatg gcacgtccgt tcgctgcacc accggaggtg ccggaggacc gggcccaggc
     3001 gctgcgggcc gcatttctcg ccacccacaa ggatccgcag tatttggagg aagccgcgaa
     3061 gctcaagatc gatgtaagcc cggtcggcgg cgcggacatg ctggcgatga tcgagcgcat
     3121 cgcaggcgcc tcaccgcgga tcgtcgatca tttgaggaaa ctgctcgccg aaaacaaagg
     3181 cggcggctga ggcccacagg ccgtcctatc tcgtcggccg taccgcatct aggctcgtgc
     3241 gcacgatcac aaactgcggc cctctctggg cgaggacatc cggcaggatt tccaagtcgc
     3301 tgcgcgactt tatccgcgtt acgtcaaagc cgaaggcacg gccgatcaat gcaaagtccg
     3361 ggttcataaa catcgtgccg atagcgcgcc ctggataatc gcgctcctgc tgaatccaga
     3421 tcgaggcgta actgcaattc tcggacagaa ccactttgag cggcaactta cgttccatcg
     3481 cgaccgcaag ctcattgccg gtcataagga atccgccgtc gccgaccaaa caggtgatgg
     3541 ggcgcgccgg ttcgcgcaat ccggccgcca ccgcggccgg gacgccgaac cccatggcac
     3601 ctgcgatcgg ggccaggagc cgttgcgggg gtgtgaacgg gataacgcgg tataccggca
     3661 ccccgaaggt gccagcatcg acagtaacga tggcgtccgg cggcaggttc tggcctatga
     3721 gcgctaccac gtcctcgaac ggcacgccgt catcgacatc gacccgtcgc ggcgtgacga
     3781 tcttgcgccg ctcgcgctca agcgcatcga gccattttgc ccgcgcgacg ccgtccggcc
     3841 actgcgccgg cgcacccagc gctgccatca gttcttgagg atcacacacc acggcgaggt
     3901 cggcagcgaa atgtgtcccg atggccgacg gatcagcatg cacatgagca agccgcatct
     3961 gtggccgcac caagtccgga taagtatagc cctgggtggt gatgtcggtc agacgggcgc
     4021 cgagcaccag cagcaggtcg gcttggcgta gcaccatcat ctgatcggga gggtttgcga
     4081 ggcccatgtc gcccgcatag agccgatgct tatgggggag gaggtcctgg gagcggaacg
     4141 aaaccaccgc cggcaagttc cattgctcca ggaaattccg cagcacctcg cgtcctcccg
     4201 gacggtcgag gctgcgcccg cacagtacca gtgggcgggc cgcgttctca agccacccac
     4261 gcagcattgc gacatcggcg ggcaccgcgg ctgcacggac catggcctgc ggaccaaccg
     4321 gtgcgccatg ggtaggtgcc gtcagtacgt cctcgggcac cgcaattacc acagggcctg
     4381 gcgtgccggt ggtggcggtc tggatcgccc gtaacatggt ttccgccata cgggccgggt
     4441 cggtgacctc ggcgcaccac ttggcgatgg caccatacat ttgccgatag tcgatctcct
     4501 gaaaagaatc gcggcggaca ttccgtgccg cgacctgtcc gatcatcaag atgaacggga
     4561 cttcgtcctg ctgggcggta tgcagtgcga tcgcggcatt gctcgccccg gggccgcggc
     4621 tcacgcagac aacgcctggc cggccggtca accgcgcatc cgcaatcgcc atgaagcccg
     4681 cgccggcctc gtgccggcac accacggtat cgatatcggc gcgaccgtag agcgcgtcca
     4741 gcaatcctag atagctctcg cccggcacac agaagacacg gtcgatgccg ttcgccacca
     4801 agctgtcgac gatcagttca cctgccgtgc ccactcggcg ctccgttgtt tccgcttttt
     4861 ttgatggttt gaagcggagc gaaacccatc atcggccgcg cgacgcggag aagctcacaa
     4921 tgggttcgca acagcaaacc catcctcgga tctacgcgct ctccggtggc acggttgcat
     4981 catattccgg atgcttggcc cgaaaggcgt cgagccaggg caccagcgtg gcgaaatcgt
     5041 tgcgccagtc gacgtgtttg cgcaggtcaa gatagccaag catacatgct gccgtgaggg
     5101 ttccgacgtt gaaatgagct gggtccggcg tctgtttggc gaatgccgtg agcgcacgta
     5161 ccaccttgcc acgctgatag tcgagccaag gtgggtggcg gatcgtttcc ggtcgatgtc
     5221 gggcctcata gacgatgagg acgcaggcat ccatgatgcc gtcgcacatg gcctgtgtgg
     5281 tcaagacgcc gagccgcgcc ggccaggcgt ccggaatgat gatgccgccg ccagccatgt
     5341 gatcgagata ttcgaggatg acgcggctgt cgtagatcgc cttgccgtcc gttgtgacga
     5401 gcgtcggaat tttaccgagc gggttgtccc gtcggagcat atcttcggga ttcattgcgt
     5461 cggcgcgcac caactcgatc ttgtccgcaa ggccgagatg caggattgcc atgcgcgctt
     5521 tgcgggcgaa cggcgatgtt ggagagctgc gcaggatcat cggcatgtag attcctcact
     5581 tgcgttcgag tgtctgcgga cgtggcggct tgccgtgtat ggcacgccag atgcgctcgg
     5641 gcgttgccgg catttccacg tggcgcacgc cgaattcccg cagcgcgtcg acgatggcgt
     5701 tgatggtaac ggcgagtgca ggtgtcgtcc cgccttcacc cgccggacga atgccgagcg
     5761 gatgggtcgg cgtcggtatt tcgctgatgc cggtgtcgaa gaacggaaac atgtccgccc
     5821 gcggcatggc atagtccatg aacgagcctg acaggagctg accggtcctg gcatcgtaaa
     5881 agcactgctc gatcaatgcc tgcccaacac cttggacgat gccaccgtga gtctggccat
     5941 cgacaatcat cggattgacg gcgcggccga cgtcgtcgac ggcggagtat ttcacgatct
     6001 tgaccgtacc aagttcgggg tcgatctcga cctcgcagag atgcgatccg aacggatagc
     6061 tcgcttccgg cacgacctca tcacaggttg ccgcgagctg cccgcgtagt tcctccggca
     6121 ggtcagtccg gcgcagcatc gcggccgaca ccgcgaaaag atcgattgcc tgatcggtcc
     6181 ctccgaccac gaaatgaccg ccgctaaatg cgacggcctc gggcttcgat tgtaaaagca
     6241 atgcggcgac gcgcttgccg cgcgcaataa tttcctgcgt cgccttccac atgatcaggc
     6301 tcgcgagccg catgccgcgc cctgaatggg caccgccgcc gaacttcacg atatcggtat
     6361 cgtgagtaat gatgcgcacg ttctcgatcg gcacgtcgta ccactcgttg acaagttgcg
     6421 cgaaggtggt ctcatggccc tgtccttgcg aggtcgtgcc gatgacgaca tcgatccaac
     6481 cgtcagggtg aacggtcatc tcagcgcgct cgcgcgccac cccggtggcc gtatcgatat
     6541 agttggcaac cgcaatacct cggtgcttgc cgcgggcgcg ggcggcggca cgacggcccg
     6601 ggaagccatc ccaatcgccg gtcttcagtg cccaattcat cgtgtgatga taagccccgc
     6661 tatcgtagac catgccaagg gcattcttgt agggaaactc cgtttccttc accagattgc
     6721 gctgtctaat ttcgacccga tcgaaatcgt gctcctgaca ggcgagatca atcagccgct
     6781 ccatcacata catgacctcc ggacggccgg cgctgcgata ggggcgggtc ggcgaggtgt
     6841 tgctcaccac ggcgcgggcg cgaaaatgcg ccgccgggat tcggtagatc gtggtcatga
     6901 tctcgacgcc tttttgcagc ggcgagtaat ttgtcgtgtg ggcgccggcg ttgctgacgt
     6961 tcgagccgcg cagccccaag aaattaccgt cccggtcaat ggcgagttcc gccgtcacgg
     7021 caaggtcgcg ggcctggtaa tcgcacagaa atgcctcatg ccggtctgat gtccatttga
     7081 ctggccgccc cacgcggcgg gccgcccacg ccacgagggc gaattccgca tagatcatgc
     7141 cgcgggtgcc gaaattgcca ccgatgtcgc gcatgaccac gcgcacctgg tcggctggta
     7201 cgccgagaat cgtggcaaga tcgtccttga gccgccacgc gccgccgttg ccggcataca
     7261 gcgtatagcg tccggtggca ggatcgaatt cgcccacagc ggcgcgaggc tccaacggca
     7321 cgccggtgac gcgctggacc catgtctcga atttcacgac gtgagcggcg cgcgcgaagg
     7381 ccgcctcggt agcggcgcgg tcgccgagtt cgccgtccac gaccacgttc gattctgctt
     7441 catcgaacag gcgcggcgca tccggacgtg ccgcctcaag cgtgtcggtg acagcaggca
     7501 atacgtcgta atcggtttcg acaagctcgg ccccgtcctt tgcggccgcg accgtagtgg
     7561 cgatcaccat ggcgaccgct tcgcctacaa agcgtacctt gtcggatggc agcgcataat
     7621 ggggcgccgt gaaggtcttg aagccgttgt gttcccgcaa catgatttcg gcgggatgct
     7681 gcgaccacac cttgtggggg atcggccgga gtccatcggc caagaggtct cgcccggtga
     7741 gcacggcgag caggccaggc gttgccatcg cgggggcgat atcgatcgcc cgaatgcgcg
     7801 catgggcgtg aggcgaacgc accatcacgg cataggcctg tccaggcagg ttgacgtcgt
     7861 cggtgtaact gcccttgccg gtgacgagcc ggagatcctc cctgcggcgg accggttgtc
     7921 caatgcgggc gctggtcggt ttatcggcca tactggtctt cagccgag
//
LOCUS       DATILV010000159         5703 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3359321, whole genome shotgun sequence.
ACCESSION   DATILV010000159 DATILV010000000
VERSION     DATILV010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5703
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3359321"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..166)
                     /locus_tag="VLJ17_03610"
     CDS             complement(<1..166)
                     /locus_tag="VLJ17_03610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019861233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HSV22096.1"
                     /translation="MTIEALIIWLVIGAVAGWLAGLLVKGYGFGLIGNIVVGIVGAIV
                     AGWLLPRIGFV"
     gene            848..1228
                     /locus_tag="VLJ17_03615"
     CDS             848..1228
                     /locus_tag="VLJ17_03615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22097.1"
                     /translation="MPEHDPPRSQELAARMRADAADREARDKAKRVVESWNAAIAAGQ
                     GALWSPTIRCAVIAGMPWLDVHCPSCGTSGAIDIRTIDRHPLASVGSLVLGLRCSMCP
                     GATPMPVLHGLHTASPAAKRSETI"
     gene            complement(1370..1561)
                     /locus_tag="VLJ17_03620"
     CDS             complement(1370..1561)
                     /locus_tag="VLJ17_03620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22098.1"
                     /translation="MDSNDCRELSKRCIEAANLAPDGTQSTLFEIAGAWLRLAAELDG
                     NQVFGDQMKGFEIFPRVYG"
     gene            complement(3184..3432)
                     /locus_tag="VLJ17_03625"
     CDS             complement(3184..3432)
                     /locus_tag="VLJ17_03625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22099.1"
                     /translation="MKQLAFGFVCAAAVAMMTFPAVAQVGVRIGEDGVGVRVGRDRAE
                     YRDREYRERDHYREHRYARECNTFWRDGHRVRVCRDNY"
     gene            4409..4726
                     /locus_tag="VLJ17_03630"
     CDS             4409..4726
                     /locus_tag="VLJ17_03630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011512257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid stabilization protein"
                     /protein_id="HSV22100.1"
                     /translation="MPRGDKSKYTNKQKRKAEHIEEGYRDRGVPEAEAERRAWATVNK
                     ESGGGKKSGAGRGHPETHVASRRGGRLGGKAAASRPVAARSRSAKKGAETRRKRVRAE
                     RRS"
     gene            5447..>5703
                     /locus_tag="VLJ17_03635"
     CDS             5447..>5703
                     /locus_tag="VLJ17_03635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22101.1"
                     /translation="MSIESQLREKLRKIEALFAGAGTAGERLAAEAALERVRARLAEL
                     GRRDPPVEIQFSMPDQWSRHLFLALCRRYGLKPYRLHRQRR"
BASE COUNT         1199 a         1720 c         1741 g         1043 t
ORIGIN      
        1 ggacaaatcc gatgcgcggc aatagccagc cggcaacgat ggcgccgaca atgcccacca
       61 cgatgtttcc gatgagtcca aagccgtagc ccttaacgag caggcccgcc agccatccgg
      121 caaccgcgcc aataaccagc caaataatca gagcctcgat tgtcatgatc gtcccctccc
      181 acggtgcgcc gacacacgac cggcgattac cattttcaaa cacggaattt tagagcgcgt
      241 tgtcggcgca aatccaggca agcgagcacg atatcatcgg aaagcgtgac gactgttgcc
      301 acgatgcaac ggtacggccg cgctcgctgt ccgcctcgtc gaagccgcgg ccgtcaacgc
      361 gatggcgagg gggcaccgca aagcgccatg cgtgcaatca gtcaccggat cgcccgctcg
      421 ctgtcggcgc tggcaccgat cagctcggcg agcggccctc gcggccacgc tggtgcgttc
      481 cgacttggcg ggacgccgcg gcaatgcggt tatcggaata gcagcggccc cctcgttcgc
      541 gtggaaagcg aatccggcac caatagagcc gtcggcgagc acgctcttga aatttgcacg
      601 acgccgttga ccactggcgt cggtagcaga cgcctatccc gacggtgtcg gatgcaattc
      661 gcgtgttggt cgagcgtggt ttagcgatga aacccgcggt tgctaagccg cgtcggccgg
      721 tgaagcgggg gaccaccggt aagcccggtt gggcgccgaa ttatccttcc gggagaacga
      781 tccccggcaa ggaggacacg atgacacctc cggcgaggcc gcggccggcg gtacactacc
      841 tctcgtcatg ccggagcacg acccgccacg cagccaggaa ctcgccgccc gcatgcgcgc
      901 cgacgcggcc gacagggaag cgcgtgacaa agcgaagcgc gtggtcgaga gctggaatgc
      961 cgctattgca gctgggcaag gcgcgctctg gtcgccgaca atccgctgtg cagtcatcgc
     1021 cggcatgccg tggcttgacg tgcactgtcc tagttgcggc acaagcggcg cgatcgatat
     1081 ccggacgata gaccgtcatc cgctggcctc ggtcggtagc cttgtgctgg ggctgcggtg
     1141 ctctatgtgc ccaggcgcga ccccgatgcc ggtgcttcat gggttgcaca ccgcatcgcc
     1201 ggcagccaag cgcagcgaga cgatttaata gcgcgcaagc cgcaagcacg gccgctgcgc
     1261 tgggaatcta ccgcgctgcc gccaaggcca aatagaccgg cacaggcaat caaggaagcc
     1321 gccaaagaat tcaggattcc ccgcggaggc tcatcgcggt gcagcggacc taaccataga
     1381 cgcgagggaa aatctcgaag cccttcatct ggtccccaaa aacttggttg ccgtccagtt
     1441 cggccgcaag ccgcagccat gcccctgcaa tctcaaacag cgtcgattgc gtgccgtcgg
     1501 gcgcgaggtt agccgcctcg atgcagcgct tggaaagttc acggcaatcg ttcgagtcca
     1561 cggacgtccc cttcgacaat ggatgcacga ctaatacctc gcccgacgtc cgtcagcaat
     1621 ttgtcctaag gtccgaaaat tgaggaggag gccggagccg acccctcctg ataggacgcg
     1681 tggcgtcgcc aggtggtatg taatgtatgg atgcttcact caacgctacg cgtggcgcga
     1741 aatccacgac tcgtgcgatc tcacggctgc cgcgcgcaat ttgcaggctc attacaacat
     1801 tgcgccgacc aacgccgtcg aggtcgtgag gactcccgat tgcgtcaccg agcttgcgcc
     1861 gatgcgctgg ggcacattcc ctggcggagg aaaaaaagcc gttgaaacag ctgcctgcga
     1921 ccttcaatgc gcgagcggtt atgacgcatg ggctcgacgg gaagcaaccg tatttcatca
     1981 gtgccgcgga ctgcagcgcg ctgagctttg cgggcccgtg ggatcgatga aagaatcccg
     2041 aggcccggca agcctttggc gtcgtgcaca atcatcgtta cgacgccaac gagctgacgc
     2101 ggccaattca cgaccgcatg ccggtggtcc tcgacaaggc agatttcgcg gcgcggcttg
     2161 gcgcggcggg attgaatttt tcgccagaaa atattcttcc atcccttcca ggggatatgg
     2221 gacggcgaaa cggcttcgcg gccgcggcca agcccgcgcg ttctttccat ttgctgcgcg
     2281 agaggttcac ggttgaaggt cgcttgcgtt cggtaacttc tgcaagggct tcctcgaacc
     2341 cggcaggccg gtggaggcgg agcagatttc tgcgcccgca aatgtccccc gcttacctgc
     2401 cagttaagcc gatcacctga cgataccaat ttgtcactgg gcggcgtagg aagcgtcgcg
     2461 tgcgcaggaa gagctgcatt caccggcgac gatgcaatgg gcaattgcag tagcttgctg
     2521 gtcggggctt agtctggtca gcagaacaat acacccgacg gaaaactcca aggcatcgta
     2581 atgctcatac ttccggtcgg ggttgatccg cctaaatcgc tgttgctccc gagattttcg
     2641 atcggaaaag actcaagtgg gcgttcacat tcaatgtcgg tgtcaaatgc aagttccgtc
     2701 cccggcacca gccaaaccgt cacgccgggg ttcccaatcg cgacgaaccc acgcctggca
     2761 ggctaaccgg tatcagtgcc gctgcagatg cgacgccgga cgggcatccc gatatcgtag
     2821 cactgatctc cgtcggcgct gtcacgccgg cgcagctcga tcgtctgcgg tgccgcatgg
     2881 cgcgaaccgt tcctccccag gtggtcatcg gatattggga cgaacagacg gccctcccga
     2941 acgaagtgga gagaacgccg aaggcatccg ctatgctaac tccgtcgcat cgctagtcgg
     3001 atttatcggg cgaatcatcc acgaacgcca gatgtcacct cacaccgcaa ggaactttca
     3061 acacatgagg ccgccgttcc cgcgataaca ccaaaagggt aggccgccaa aattcgatgc
     3121 gctcccaaac gcagtggatt gtcgggcgca agcccacgac gaggaaatgc gcccggaaaa
     3181 cttctagtag ttgtcgcggc aaaccctcac gcgatgtccg tcacgccaaa aggtgttgca
     3241 ctcgcgagca taccggtgct cacgatagtg gtccctttca cgatactcac ggtcacgata
     3301 ctccgcacgg tcgcgcccca cgcggacacc gaccccatcc tcaccaatgc gaacgccgac
     3361 ttgcgcgact gccgggaagg tcatcattgc gaccgcggca gcgcatacaa atccgaaagc
     3421 gagttgtttc atttccatct cctagacaag gttgccgata cggggaacac ctacggggaa
     3481 cgcgcgaagc cgacgaaggt ttcgtcaaaa atgcgttgaa acgaatcggc cgtcgcgcag
     3541 cataacggct ttgatagatt gcctatttgg tggtttgcga catttggagc gatgcgcgat
     3601 tcgagcggat aggtggaaca aagcggtgct gtcgtcgttg agatagattg ctgacagctg
     3661 ctcatcatga acctggcaag tcgcgacgca ccgacatccg gttgcttcgt ccctgcgcgc
     3721 cggcactacg cgaaaaagcc gctgggactg atttcgctca ttggtcaacc ggcgtaaatc
     3781 cgatcgggcg ttgggccgaa aagcactttg aagaaccaag cgttactgtt gtactgccgt
     3841 ttgggtacgc ggttttggtt cacgaaccaa gagccattcg tcgcgttctt ctggagaaca
     3901 ccgtcaacta tcccaaaggg ttcgctgcaa cgcccggttt tttgtcggct gggttgaacg
     3961 acaggctgct cagcgccgag ggggcacggt ggcaggtgca acgccgggcg ctcgcgccca
     4021 tgttcacccc gaggaccacc atgagttttg cgccatattt gccagtcggt ttcgtccagg
     4081 tgaacgcaat gagattgacg cttcgcctat ccgcccttcg gcgccggacc gcgaacgtgc
     4141 agcggctcgg cccttgcgtt gcaagaggcg gtcctcgtgc tggcgaccat cgtgaaaaag
     4201 ttccgactgg acctcgcatc cggatgcgcc gtttggccct tgctgagggt aacgctgcgg
     4261 ccggcgcatg ggcttcgtat gatcgccagt cccaggtgag cgggacggcc agacggagtg
     4321 tgtgtgccgg accaaaaagg ccacaggaac gctgaaaatg ctcacacgtt ccttgaaaac
     4381 aatcgaacgt cacagcatgg aggatgcgat gcctcggggc gataaatcca agtataccaa
     4441 caagcaaaag cgtaaggccg agcacattga agaaggttat cgcgataggg gcgtgcctga
     4501 agccgaggcg gaacgccgcg cctgggctac cgtcaataaa gagagtggag gcggcaagaa
     4561 gagtggggcc gggcgtggcc atcctgaaac acacgtcgcg tctcgccgcg gcggcaggct
     4621 tggcggaaag gccgcggctt cgcggccggt ggcagcaagg tcacgctcgg ccaaaaaagg
     4681 cgccgagaca cgccggaaaa gggttcgcgc tgaacgtcga tcgtagagcg gttggatcgg
     4741 atttgccccc tgcgctgcac aaactcgcac gatccccaac gctgtcatgc ccacggcaag
     4801 gtgtcagtca tctcgggttt agaggggctc gtcggatacg ctcggcataa gttcaattgc
     4861 gccaccgcgt gctctcgcgt ttgcgcgccg gagccaagga tatagcagcc gcgaggcgca
     4921 cgatcttcac gctcgcggcg catagccgcc caatcgatgg tcaacatccg tgcctgcttc
     4981 acacttgaag cagggccgct cagtgcggcc ttctagtact attgagtcat aaggcccggt
     5041 cggctggtcg catacgagtt cggtacggtg aaaggcctgg gcgatccggt ctgctggcag
     5101 aatcaccgca gcgacgtcgg gagcaatgag gtcagatgtt gccacaaagt tccaatatac
     5161 cgggccgtcg ccgacgtacg taggacaatc gcgattacgg ccggccttac tgtttgcgcg
     5221 agctcagcaa gacctgaaaa tacgattgcg tttgctcaag actggcaagc cgacacaaat
     5281 ggggtgtgcc caagtcgtaa gcgtttcgcg ggacgcacgg caatttccct tgcaatcggc
     5341 gaatcgacca gtttggaaat aacgtggata gcgcagccga gcttattgac gtcgagacgg
     5401 ctggatgtag ggctgtgggc tgcaagccca gtgacgaggc cgcttgatgt cgatcgaatc
     5461 ccaattgcgc gagaagctac gtaagatcga ggcattgttc gccggcgccg ggacagctgg
     5521 cgagcgattg gccgcggagg cggcactgga gcgggtccgt gcgcgtctgg ccgagctcgg
     5581 ccggcgggat ccaccagtcg agattcaatt ctcgatgccc gaccaatggt cgcggcatct
     5641 atttctcgct ctttgccggc gttacgggct gaagccctat cgtcttcatc ggcaacggcg
     5701 caa
//
LOCUS       DATILV010000160         6072 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1571205, whole genome shotgun sequence.
ACCESSION   DATILV010000160 DATILV010000000
VERSION     DATILV010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6072
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1571205"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..186)
                     /locus_tag="VLJ17_03640"
     CDS             complement(<1..186)
                     /locus_tag="VLJ17_03640"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSV22102.1"
                     /translation="MSTNESSIRNGEIAKRLKLRRLQLGLSQESLSRALGVTFEQVQK
                     YETGTDRIEVGRLQQIAE"
     gene            complement(248..1252)
                     /locus_tag="VLJ17_03645"
     CDS             complement(248..1252)
                     /locus_tag="VLJ17_03645"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HSV22103.1"
                     /translation="MASDGAAPDWESIRIFLEVARASSFRTAASRLRMTGHGIARRIE
                     QLEHQIGAILFTRHRYGVRLTTAGHQLLSCAEQMEEASLGFVRRRGMLAQPLRGEVRI
                     ACTEGLGTFWVTPRLLEFVRAHPQILVDLHCSMLRPDDLVARAQADLAIQIEQPERRD
                     LIIRRIGRMHILPCASKSYIATYGLPAAKQEIGERHRIVLMNAEQGRASEYYDQQFPE
                     RQQTGFVAMRTNVSTALYAAIVNGVAVGWLPTYYFAIGAPVVPLDIDWIYSFDIWLSY
                     HPDLGQVPRVRRMIDWAIEEFDPQKCPWFRDDFVHPGAFGQHLGARSPGAIDAAFGRP
                     "
     gene            1364..2617
                     /locus_tag="VLJ17_03650"
     CDS             1364..2617
                     /locus_tag="VLJ17_03650"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSV22104.1"
                     /translation="MTVHDVRVSGSGKLAYDDAQRSTRRLDDPAILTLARRLVVFNTV
                     GEEIARLMELARQAIPALTTADIVQRVASYNPDCFWAIAHRDKFDVKAPVGEGYVAFL
                     PLTKQGLNQLLDGTLDRKNPPLSVISPQHERPAGIYVWHVYAPGKLAAGAPLIMQKMW
                     GPHCHDVDVYSWSINNEAARFVEGMGFRLAPKLAGSTAPQFHLFRRSRPRHQEATLCA
                     LPTRHVPEPYLSVRVARTIDDFMRAAVIRGAVFIGEQKCPYDEEFDGNDFSATHLIGY
                     VGNEPAGCLRIRYFSDFVKLERLVVRREFRSSGLARQLVNAGVELCRTKGYTRMCTYA
                     QKRLVKFWGKCGFSISDTPRELVFSDFDYVEMVCNTESAATTISFETDPYVVIRPEGS
                     WERTGILEHSRGRGVSRPSAEGAAA"
     gene            2614..3213
                     /locus_tag="VLJ17_03655"
     CDS             2614..3213
                     /locus_tag="VLJ17_03655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007562167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HSV22105.1"
                     /translation="MNQVIYLRALSDSSVAPCLVLVDMQQEYVAGSRLMALPNADAAL
                     ANCRAVLDHARSRGFPVAFLRQVSRSAYFNPATTFCGWIRGFEPTGADMVFEREYPSC
                     YSSKLFAQFMEGCGGHFALAGFAGETACLSTAIDAFHRGHRFSYLADASASHGLGELS
                     AADVQNAVTGIVGVYGDIVSTRAWINQSPTNTELLRVRR"
     gene            3210..3494
                     /locus_tag="VLJ17_03660"
     CDS             3210..3494
                     /locus_tag="VLJ17_03660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22106.1"
                     /translation="MITDRNQQIHTLIESLSHSARLAQGLSLDDTARLIAMALLDLQT
                     KLHSISPQELRSFTRTVANVVEFKVREPANDTKRAEAVESGPHEQMPFAR"
     gene            3737..4363
                     /locus_tag="VLJ17_03665"
     CDS             3737..4363
                     /locus_tag="VLJ17_03665"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22107.1"
                     /translation="MLQAYARTDFGVAYVVVRAVIPPTLFVIGSIFMNQPGGLYAVQG
                     LALVVMSLLLFAFSRQTIRDCPTGGMLMAVTAGGALAFALVFDVNGIRACGGGVDCLI
                     PFAVTSSLVTAIGLGLVCGVERTNPFAVLWNHATLCYAGAILLLSSYLCGMWAYVHGP
                     LGSVAALRESGIVFGGALAVLVLRESVSSLQWMAVGLATIGVVLVQVG"
     gene            4360..5100
                     /locus_tag="VLJ17_03670"
     CDS             4360..5100
                     /locus_tag="VLJ17_03670"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV22108.1"
                     /translation="MSIFKMPSTQLPPHARRRRAIIAASIGNAFEWFDFIIYGFFAMV
                     IAKLFFPVANESASLVLTFASFGVTFVMRPLGAIVLGHLADRRGRKTALTLTFLMMMA
                     GTALTAFAPTYSSIGVWAPIMIVVARLIQGFSVGGEFGSATVFLAEQNPKQRGFYASW
                     QFAGQGLSAVLATGFGVVLNSALTAEQMEMWGWRIPFLFGLLIGPVGYYIRRHVDETL
                     EFQSAQTTSAPLRETLVNEKTRLLIALG"
     gene            5101..5637
                     /locus_tag="VLJ17_03675"
     CDS             5101..5637
                     /locus_tag="VLJ17_03675"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV22109.1"
                     /translation="MALQTAAAYTNLYMPTYAVHQLGLPPAVGFLAGLLAGAIQIVIV
                     PVSGTLSDRLGRLPIAAAAIAATLVSVQPLFAWLVARPTIGWLLVVQATIGVFIAVYV
                     GPISVLICELFPAHVRTTAVSTSYSLAVAIFGGFAPLIMASLINLTGSSLVPSYYLMF
                     AAVISLAALGAANRLGFR"
     gene            5843..>6072
                     /locus_tag="VLJ17_03680"
     CDS             5843..>6072
                     /locus_tag="VLJ17_03680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007592772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22110.1"
                     /translation="MRYAALCCCVLAASLLLVVGAANAQLRGHGGPVRALAVAPDGRG
                     LMSGSFDTSVIRWSLERDAAEDVLRFHDGAVNA"
BASE COUNT         1134 a         1731 c         1811 g         1396 t
ORIGIN      
        1 ctcagcgatt tgttgcagcc gaccgacctc gatgcggtcg gttcccgttt cgtacttttg
       61 cacctgctcg aatgtcacgc cgagtgcacg actcaatgac tcttgcgaga ggccgagctg
      121 caggcgccgc aatttaagac gcttggcgat ttcgccgttt cgaatggatg attcattggt
      181 cgacatatgc ggagccattc ttagagagct cgaaaattca gtgaccaact acgccgacgg
      241 ttctttttta tggtcgcccg aaggcggcat caattgctcc cggcgaacgc gctcccagat
      301 gttgcccgaa cgcgcccggg tgaacaaaat catcgcggaa ccagggacat ttctgcggat
      361 cgaattcctc gatagcccag tcgatcatcc ggcgaacccg cggcacctgt ccaagatcag
      421 gatgatagct cagccaaatg tcgaaggaat aaatccaatc gatgtcgaga gggaccaccg
      481 gcgccccgat tgcgaaataa tatgtcggta gccaaccgac cgcaacccca ttaacgatcg
      541 ccgcgtagag tgcggtgctc acatttgtgc gcattgcaac gaagccggtc tgctgtcgtt
      601 ctggaaactg ctgatcgtag tattcgctcg ctctgccctg ctcagcattc atcaagacga
      661 tgcgatgacg ttcgccgatc tcctgcttcg ccgcgggcaa gccataggtg gcgatgtagg
      721 acttcgatgc gcatggcaag atgtgcatcc ggccgatcct gcggataatg aggtcacgtc
      781 gctcaggctg ctcgatttgg atggcgagat cggcctgcgc ccgcgccacc aaatcgtcgg
      841 gccgcagcat cgagcaatgg agatcgacca ggatctgagg atgggcgcgc acaaattcga
      901 gaagtcgcgg cgtgacccag aacgttccga gtccttccgt gcatgcaatc ctgacttcgc
      961 cccgtaaggg ctgtgcaagc ataccgcggc ggcgcacgaa tcccagcgag gcctcttcca
     1021 tttgctcggc gcatgacaac agctggtgac cggccgtggt caagcggaca ccgtaacggt
     1081 gccgcgtgaa cagtatcgcg ccgatctgat gctccagttg ttcgatccgc cgcgcaatgc
     1141 cgtgaccggt catgcgtaat cgggatgctg cggtgcggaa actgctggcc cgcgccacct
     1201 cgagaaagat cctaatactc tcccagtccg gcgctgctcc gtcggacgcc atgtgacgct
     1261 caatttcgtg agcaccgata gtcgaattcg atcgcaccgt gtcacctcaa accaagctac
     1321 gtagggacca caacaagaca caatcgtaga ggggagattt gtgatgactg tacatgacgt
     1381 cagggtgtcc gggagcggga agcttgcata cgacgacgca cagcgatcga cccgaaggct
     1441 agatgatccg gcaatcctta cgctcgcacg tcgcctcgtc gtgttcaata ccgtcggtga
     1501 agaaatcgct cgccttatgg agctcgcccg acaggcgatt cccgcactca caacggcaga
     1561 tattgttcag cgcgtcgcat cctacaaccc ggattgtttc tgggccattg cgcaccgcga
     1621 caagttcgac gtcaaggcgc ccgttggcga gggatatgtt gcatttttgc cactaacaaa
     1681 gcaggggttg aatcagctgc tcgatggaac gctagatcgt aaaaacccgc ctctgtccgt
     1741 tatttcgccc caacatgagc ggcctgccgg catttacgtt tggcatgtct atgcccccgg
     1801 caagctggcg gcgggggcgc cgctgatcat gcagaagatg tggggtccgc actgtcacga
     1861 cgtcgatgtt tacagctggt cgatcaacaa tgaggccgcc cgcttcgtcg agggcatggg
     1921 gtttcggctc gcccctaagc tggccggcag tacggcgccc caattccatc tgttccgtcg
     1981 ttcccggccg cgccaccaag aagccaccct ttgcgcatta ccgacccgac acgtgcctga
     2041 accgtatctc tcggtccggg tcgcgcggac aatcgacgat tttatgcgcg cagcggtgat
     2101 ccgaggggcc gtgttcattg gcgagcagaa atgcccctat gatgaagaat tcgacgggaa
     2161 tgattttagc gcgacccatc tgattggcta tgtgggaaac gaaccggccg gctgcctgcg
     2221 cattcgttat ttttccgatt ttgtcaaatt ggaacggttg gtggttcgta gggagttccg
     2281 aagctcgggc ttggcgcggc agcttgtcaa cgctggcgtc gagctttgtc gaacgaaagg
     2341 ctacacccgc atgtgcacct acgcacagaa gcggctggtc aagttctggg gcaagtgtgg
     2401 cttttcgatt tctgacactc cccgggagtt ggtgttctcg gatttcgact atgtcgagat
     2461 ggtgtgcaac acggaatctg cggccacgac gatatcgttc gaaaccgatc cctacgtggt
     2521 cattcgccct gaaggcagtt gggagagaac gggaattctg gagcactcga ggggccgcgg
     2581 cgtcagccgg ccttccgcgg aaggagctgc cgcatgaacc aggtcattta tctgcgggca
     2641 ttgtccgatt catcggtcgc cccgtgcctc gttctggtcg acatgcagca ggaatatgtc
     2701 gccggttccc gcctcatggc cctaccgaac gccgatgcgg cactcgccaa ctgtcgcgcc
     2761 gtgctcgatc acgcgaggtc gaggggtttt ccggtggcgt tcctgcgcca ggtaagccgg
     2821 tcggcctact ttaaccccgc cacgacattc tgcggatgga tacgcggatt tgaaccgacc
     2881 ggcgccgaca tggtgttcga gcgagaatat ccgtcttgct attccagcaa gctgtttgcg
     2941 cagttcatgg agggctgcgg cggtcatttt gcccttgccg gatttgccgg ggaaaccgca
     3001 tgtctctcca ccgcgatcga cgcgttccat cgcgggcacc gtttttcgta tttggcggac
     3061 gcttcggcaa gccacgggct cggcgaactt tcagccgcag acgtgcaaaa cgcggtaacc
     3121 ggcattgtcg gcgtttacgg cgacatcgta agcacgcgcg cctggatcaa ccagagcccg
     3181 acaaatactg aattgttgag ggtaagaaga tgatcactga tcgcaaccaa caaattcata
     3241 ctctgattga gagtctgtcg catagcgcca gactggccca agggctgtcg ctcgacgata
     3301 cggcgcggct catcgctatg gcgttgctcg atcttcagac gaagttgcat tcgatttcgc
     3361 cgcaagagct tcgcagcttc acccgcacgg tcgcaaacgt ggtggaattc aaggtgagag
     3421 agccggccaa cgataccaag cgcgcggaag ctgtcgagag cggtccgcac gaacaaatgc
     3481 cgttcgcccg ctaaggctaa gggcgttggt cttgacgtgg gcggtgttca ttgctgccgt
     3541 cgcaagcgcg cttttgcatg cgtgttggaa tgttctggca aagctgcacg cggcgcccag
     3601 agatttgctc cgtggcatca ttttcgcgac cgccagtctt tccagcgtcc tattgccctt
     3661 cgtgggcgtg cctcctcata acacttggcc ttggattgcg gctgcgagcg tttgcaacgt
     3721 tgtcttcacg caagcaatgc tccaggccta cgctcgcacc gatttcggag ttgcctatgt
     3781 ggtcgtgcga gccgtcatcc cgccgactct atttgtaatc ggctcgatat tcatgaacca
     3841 gcccggcgga ctgtatgcag ttcaaggctt ggcgcttgtg gtgatgagct tgctgctatt
     3901 tgcgttttcg aggcagacga ttcgcgactg cccaacaggc ggaatgctga tggcagttac
     3961 tgccggcggg gcactggcgt ttgcgcttgt gtttgatgtg aatggcatcc gcgcgtgcgg
     4021 tggcggggtc gactgcctga tcccctttgc ggttacgagc tcgcttgtca ctgcaatcgg
     4081 tttgggattg gtttgtggcg tcgaacgcac aaatccattt gccgtgctgt ggaaccacgc
     4141 tacgctttgc tatgcgggtg caatcttgct gctgtcgtcc tatttgtgcg gcatgtgggc
     4201 ctatgttcat gggcctctcg gctcggtcgc ggccttacgt gaaagtggaa ttgtctttgg
     4261 cggtgcgctc gccgtgttgg tcttgcgcga gtctgtcagc agcctgcaat ggatggccgt
     4321 agggctggcg accatcgggg tcgtcctcgt tcaggttgga tgagtatttt caagatgccg
     4381 tcgacgcagt tgccgcctca tgcacggcgc cggcgcgcga tcatcgctgc atccattggc
     4441 aacgcgttcg agtggttcga ttttatcatc tacggttttt ttgcgatggt gatcgcaaag
     4501 ctgttctttc cggttgcaaa cgaatccgca tcgctcgtgc tgacgttcgc gtccttcggc
     4561 gtcactttcg ttatgcgccc gctcggcgcc atcgtgctag ggcatctcgc cgatcgccga
     4621 gggcgaaaga cagccttgac attgaccttc ttgatgatga tggccggaac cgcattgacg
     4681 gcgtttgcgc cgacatattc gtcgatcggc gtatgggcgc caatcatgat cgttgtcgcg
     4741 cgcttgatcc agggcttttc ggtaggcggc gaattcggca gcgcaacggt cttcctggcg
     4801 gagcagaatc caaagcagcg aggcttttac gcgagttggc aatttgccgg tcagggactg
     4861 tcggcagttc tcgcgaccgg tttcggtgtc gtcctcaaca gcgcgttgac ggccgaacag
     4921 atggagatgt ggggatggcg aatccccttc ctgttcgggc tgttgatcgg gccggtcggc
     4981 tactacatcc ggcggcacgt cgacgaaacg ctggaatttc aatcggcgca aacaacttct
     5041 gcaccacttc gagaaacgct cgtcaatgag aagacgagac tgctaatagc acttggatag
     5101 atcgccctcc aaacggccgc tgcctacacg aatttgtata tgcccactta tgcggtacac
     5161 caactcggtt tgccaccggc cgtaggattc ttggccggct tgcttgccgg cgcaatccag
     5221 atcgtcatcg tcccggtgtc tggcacactc tccgacaggc tcgggcggct gccgatcgcc
     5281 gccgccgcca ttgccgccac attggtgtcg gttcaaccgt tgttcgcgtg gttggtcgct
     5341 cggccgacga tcggttggtt gttggtcgtc caggcgacta tcggtgtctt cattgccgtt
     5401 tatgttgggc cgatttccgt gcttatttgt gaactgttcc ccgcccatgt gcgcaccacg
     5461 gccgtgtcga cgagctattc actggcggtg gcaatttttg gcgggttcgc accattgatc
     5521 atggcgtcgc tgatcaatct taccggcagc agcctggtgc ccagctacta tcttatgttt
     5581 gcagctgtga ttagcctcgc ggctcttggg gccgcgaatc ggcttggatt tagatgaaaa
     5641 tttgatcttg cgaggccttg ttcgtcccct catggagcgg aacgctctga cgcggctcgc
     5701 aagagccgca tgaaacgggc ctcgaagaag caggaaccga acggcattgg cgagctttgc
     5761 gaaagcttag ctcaactttg cgtaggtttc gtagagggga gccttgtgaa atcttgcgcc
     5821 agccttcaga ctgccgcgca agatgagata cgctgcgtta tgttgttgcg tgttggcggc
     5881 aagtttgctg ttggtagtcg gcgccgcaaa cgcacagttg cgcggtcacg gcgggccggt
     5941 tcgcgccctt gcggtagcgc ccgacggcag ggggctgatg tcggggagtt tcgatacctc
     6001 agtgatccgc tggtcgctcg aacgcgatgc cgccgaagat gtgctgcgct tccatgacgg
     6061 cgccgtcaat gc
//
LOCUS       DATILV010000161         2059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2083033, whole genome shotgun sequence.
ACCESSION   DATILV010000161 DATILV010000000
VERSION     DATILV010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2059
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2083033"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(110..343)
                     /locus_tag="VLJ17_03685"
     CDS             complement(110..343)
                     /locus_tag="VLJ17_03685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22111.1"
                     /translation="MRVQVDPQAAPRTLYWGERRITIVEVIDQWYGPGYRYVKVKGYD
                     RNVYILRFDQIRDTWDLIMFSSERAPRLSTGAA"
     gene            496..1032
                     /locus_tag="VLJ17_03690"
     CDS             496..1032
                     /locus_tag="VLJ17_03690"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002710870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HSV22112.1"
                     /translation="MTFTERSFRDALGLFPTGVAVVTTVATDGARIGATVSSFNSVSL
                     SPPLVLFSIARTSRSFAAWSGADTYAINLLHEHQHDFSTRFARSLAEKWEGIIPLSGQ
                     TGAPLIPGALASFECENYARYDGGDHLILVGKVCALTTATAGDVRPLIFYRGSYQKIE
                     RDYDPNTPSDFYYLLNGW"
     gene            complement(1050..>2059)
                     /locus_tag="VLJ17_03695"
     CDS             complement(1050..>2059)
                     /locus_tag="VLJ17_03695"
                     /inference="COORDINATES: protein motif:HMM:NF015214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase C-terminal
                     domain-containing protein"
                     /protein_id="HSV22113.1"
                     /translation="YQRQNIPVPTLRVIREDDSGVVISGMKMLATGAVFANEIWIGNL
                     LPLAPDQKNEAITCAIPCNAPGLKLWSRQPFELGCTSEFDSPLAYRYDETDSMLLCDE
                     VKVPWERVFVHGDALLARNIYVTTPSHCFGNHQSNVRYWSKMRLLVGLCSKIAHATGA
                     DQVPAVREALGRISSYEAMIAGMVNGQINAFEDWPGDGYVCFNRRIMYAALEWCTQNY
                     SKFIDELRELCGGGVFQMPANISVMRDADLARDFQTYWQTPQSDAVTRMKLFKLAWDM
                     VGSEFAGRHLQYEKFYAGASFIVRNHAFRETDWASFNKVAEDLMASYDHNGGIARIAA
                     E"
BASE COUNT          432 a          590 c          562 g          475 t
ORIGIN      
        1 ttcaccgcca agctgaggcg ctgatgttac tcgtgttcca cataaacgac tggcaggacg
       61 agcgaacgat cggggatcct ggtttgcgcc taaggctgga cgagccaagt catgccgctc
      121 ccgttgaaag gcgtggggca cgctccgacg agaacatgat taggtcccag gtatcgcgga
      181 tttggtcgaa gcggaggatg tacacgttgc ggtcgtatcc tttgactttg acgtagcgat
      241 acccgggccc ataccactga tcgataactt cgacgatggt gatccgacgc tcgccccaat
      301 aaagggttcg cggcgccgcc tgcgggtcaa cttgaacgcg catgatttct ttttatacga
      361 atgtccgatg tagtccatcg gcccgtgggg cgtcccatgg accgccggca gtttgtaccg
      421 agccacaatc gcttgctctg acgacgtaag tagacaaaca tcggcgagtc tatttgccgc
      481 aaaaaggtac gccaaatgac cttcacggag cgaagcttcc gagatgctct tgggctcttt
      541 ccgacgggcg tagccgtcgt aactactgtg gcgacggacg gcgctcgtat cggtgcgacg
      601 gtgagctcgt tcaattctgt gtcgttgtcg ccgccgcttg tcctcttcag cattgcgcgg
      661 acctcgagat catttgcagc ttggagcggc gccgacactt atgcgatcaa cttactgcat
      721 gaacatcagc atgatttttc cacacgcttt gcccgctctc ttgcggaaaa atgggaaggc
      781 atcattcccc tttccggcca gaccggtgcg ccgctcattc cgggcgcgct tgcctcattc
      841 gaatgcgaga attacgcccg ctatgacggt ggggatcact tgatactcgt tggcaaggtc
      901 tgtgctctaa cgacggcaac tgccggtgat gttcggccgc ttatctttta cagaggctcc
      961 taccaaaaaa ttgagcgcga ctacgatccc aacacgccat cggatttcta ttacttgttg
     1021 aatggatggt agctggtcag tccaaccgct tactctgccg caatcctagc gattccgccg
     1081 ttgtggtcgt aactcgccat caaatcctcg gcgactttat tgaatgaggc ccagtcggtt
     1141 tcgcggaacg catggttccg tacaataaaa gatgcgccgg catagaactt ttcgtactgc
     1201 aggtgccgac cggcgaactc ggagccaacc atgtcccagg caagcttaaa cagcttcatg
     1261 cgcgtcaccg catcgctttg aggggtctgc cagtaagtct gaaagtctcg cgcgagatct
     1321 gcgtcgcgca taaccgaaat gttcgccggc atctggaaca cgccgccgcc gcataattca
     1381 cgaagttcgt caatgaattt gctgtagttc tgcgtgcacc attccagcgc cgcgtacatg
     1441 atgcggcggt taaaacagac atagccgtcg cccggccaat cctcgaaggc gtttatttga
     1501 ccgttcacca ttccggctat catcgcctca taggacgaga ttctacccaa cgcctcgcga
     1561 accgccggca cctgatcggc accggttgcg tgtgcaatct tgctgcacag gcccaccaag
     1621 agccgcatct tcgaccaata acgcacgttg gactgatggt tgccaaaaca gtggcttggt
     1681 gtcgtgacgt agatgttgcg cgccaaaagc gcatcgccat gcacaaagac gcgttcccat
     1741 ggcaccttga cctcgtcgca cagcagcatg ctgtctgttt cgtcgtagcg gtaggcgaga
     1801 ggcgagtcga attccgacgt gcagccgagt tcgaatggtt gccgtgacca caatttcagc
     1861 cccggtgcgt tgcacgggat tgcacaggtt atagcctcgt tcttctgatc gggtgccaga
     1921 ggtagcaaat tgccgatcca gatttcgttg gcgaatacgg cgccggtggc cagcatcttc
     1981 atgcctgaga tgaccacgcc ggagtcgtcc tcgcggatca ctcgcaatgt cggtactgga
     2041 atattctgcc gttgataaa
//
LOCUS       DATILV010000162         1519 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2848367, whole genome shotgun sequence.
ACCESSION   DATILV010000162 DATILV010000000
VERSION     DATILV010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1519
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2848367"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..266)
                     /locus_tag="VLJ17_03700"
     CDS             complement(<1..266)
                     /locus_tag="VLJ17_03700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1036 domain-containing protein"
                     /protein_id="HSV22114.1"
                     /translation="MDARDKPGYDEEKKIFFQASALLAAVIFFILPTSARADLKLCNR
                     MSYVIEAAIGIDDKSATATRGWFRIDPAACRVVVQGTLTADRILL"
     gene            complement(347..1243)
                     /gene="argB"
                     /locus_tag="VLJ17_03705"
     CDS             complement(347..1243)
                     /gene="argB"
                     /locus_tag="VLJ17_03705"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HSV22115.1"
                     /translation="MTDVPHISPLDQARILSEALPHMQQYDDETIVIKYGGHAMGAED
                     VAKAFARDIVLLEQTAINPVVVHGGGPQIATMLKRLGIQSEFAAGLRITDAATIEIVE
                     MVLAGSINKQLVGYINEAGGKAVGLCGKDGNMVMASKATRTMVDPDSHIEKVVDLGFV
                     GEPEKVDLTLLNQLIGYELIPVLAPLATSRSGQTFNVNADTFAGAVAGALKAKRLLLL
                     TDVPGVLDKSKKLISEISIKDARKLIADGTISGGMIPKVETCIYALEQGVQGVVIIDG
                     KLPHAVLLELFTNQGTGTLIHK"
BASE COUNT          278 a          454 c          467 g          320 t
ORIGIN      
        1 agcaggatac ggtctgcggt cagcgtgcct tgaacgacca cgcggcaggc cgccggatcg
       61 atgcgaaacc atccgcgggt tgcagtcgcc gacttgtcgt cgatgccaat cgcggcctcg
      121 atcacgtagc tcatgcgatt gcagagcttg aggtcggcac gggccgaggt cgggagaatg
      181 aaaaagataa cggcggccaa aagggcagat gcctgaaaga atattttctt ttcttcgtca
      241 tacccgggct tgtcccgggc atccatgtcc tcctgacgtt ctcgccgcca gcaagacgcg
      301 gatggccgga ataaatccgg ccatgacgaa gaatggtttc gcttcatcac ttgtggatca
      361 gcgtgccggt gccctgattg gtaaagagct cgagcagcac cgcgtgcggt agtttaccgt
      421 cgatgatgac gacgccctgc acgccctgtt ccagggcgta gatgcaggtt tcgaccttcg
      481 gaatcatgcc gcccgaaatg gtgccgtcgg cgatcagctt gcgcgcgtcc ttgatcgaaa
      541 tctccgaaat cagcttcttc gatttgtcga gcacgccggg cacgtcggtc aacagcaaca
      601 gccgcttggc cttcaaggcg ccggccaccg caccggcaaa cgtgtccgcg ttgacgttga
      661 aggtctgccc cgagcgcgag gtcgcaagcg gagccagaac cgggatcagt tcatagccga
      721 tcaactgatt gagcagcgtc aaatcgacct tctcgggctc gccgacgaag ccgagatcga
      781 ccaccttttc gatatgcgaa tcaggatcga ccatggtgcg cgtcgccttc gaggccatca
      841 ccatgttgcc gtccttgccg cacagtccca ccgccttgcc gccggcctcg ttaatgtagc
      901 ccacgagctg cttgttgatc gaacccgcaa gcaccatctc gacgatctcg atggtcgcgg
      961 cgtcggtgat gcgcaggcct gcggcgaatt cggattgaat gcctagccgc ttcaacatgg
     1021 tcgcgatctg cgggccgccg ccatgcacca ccaccggatt gatcgcggtc tgctccagaa
     1081 gcacgatgtc gcgggcgaag gccttggcga cgtcttcggc acccatggca tggccgccat
     1141 atttgatgac gatggtttca tcgtcatatt gctgcatgtg cggcagtgcc tcggacagga
     1201 tgcgggcctg atcgagcgga ctgatgtggg gcacgtcggt catgaagcgg gtctcgcggt
     1261 ctccagatta agcatgatct tttcggaaaa ccggtaccca cttttccgga tcatgctgta
     1321 ggtggggcgg tttctatccg attggcgggc acggcgcaaa ggatggtctg cactctttac
     1381 ccgcgttacc cgcgttcccc ggatgctgcg cagcgcgcgg ggtccctgtg tctgatggtt
     1441 ctgtcatgat ggggtgggcg ggaagccgtt gggtccctgg cgcttgacgc cgtgagccgg
     1501 ctcggtctcc cgcccgttt
//
LOCUS       DATILV010000163         3828 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4639063, whole genome shotgun sequence.
ACCESSION   DATILV010000163 DATILV010000000
VERSION     DATILV010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3828)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3828)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3828
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4639063"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            849..1106
                     /locus_tag="VLJ17_03710"
     CDS             849..1106
                     /locus_tag="VLJ17_03710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22116.1"
                     /translation="MTKFASQAGTEAAKSARHVASNVAGQVGGAVNDLSSEGAEMASA
                     ASKQAKTLASELENIARRNPLGAIAGAVVLGALIGLMGRRS"
     gene            1106..1798
                     /locus_tag="VLJ17_03715"
     CDS             1106..1798
                     /locus_tag="VLJ17_03715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22117.1"
                     /translation="MLFKILKLFGIDVPAQMASLERRVEEAADHVKQVAREAAIIAAL
                     TAIAGIATTMAVGIGLIALYRWTADAYGVYAGLEVTAGIMVAIALLSGVGAAIKGKSL
                     SSKEASVPDAIQFESSDVDWRPAEPTSADRPATHGEPAVAAIQTSGTAASDVIEPLAL
                     LLSKIVRYPSLGNPVVDRLIDSLRVTSHGAADETINSAAHVIRNGDRTNLVLVLTGAA
                     FIGWLLSHHAEP"
     gene            complement(1815..2942)
                     /locus_tag="VLJ17_03720"
     CDS             complement(1815..2942)
                     /locus_tag="VLJ17_03720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HSV22118.1"
                     /translation="MQKLPQIQTQATFVKSLLIVAAAFALSAFEKDLSRRAPRPFEAQ
                     APNREPLARQMERARELGRGREAVSPSHIPWKGWKDIFWRTHSRVSQSRLVAISAAVV
                     FYGLLALFPAITALVSSYGLFAAPATIRGHLSFAAEMIPTDAFSVVQDQIARVVAKGE
                     VKLSFAFVFGFGLALWSANSGMKAIIDALNVVYEEQEKRGLIRLNLLSLGFTACAIAA
                     MLTAVGAVVITPLLLDRIGLGALTESIVRILRWPTLALGMLAGLAVLYRYGPSRHRAR
                     WEWLSVGAVFATVAWFVGSAALSYYLANYANYDVTYGSLGAAIGTMIWMWMSAIVILF
                     GAALNSEIEHQTARDTTVGKEKPLGARGAIMADTVGAAQLL"
     gene            3729..>3828
                     /locus_tag="VLJ17_03725"
     CDS             3729..>3828
                     /locus_tag="VLJ17_03725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020487478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3309 family protein"
                     /protein_id="HSV22119.1"
                     /translation="MLSTILIIVLILLLIGALPHWPYSGGWGYGPGG"
BASE COUNT          837 a         1082 c         1112 g          797 t
ORIGIN      
        1 atgatagagg gcagcgcatc ggctcaggta tattttggtg gcccgggctt cgacgtcggg
       61 tttggcgcac cgtactacga ggaccggtat tatcggtact atgacgagcc ctactacgga
      121 tagtacgggt attatccgta ccggcactgg cgtcaccgcc accggcatcc gtattaagct
      181 aacgtgaaag cgtgaccttg ggtgggcgcg accgggggcc ggtaagcatt cgctgttttg
      241 cgattgggag tggggggctg cgcgacgcgc gcctccactt tttgcgaacg ctgctcaatc
      301 ggcatctggc gcgccgggtt gtattcttgg ttcagcagcc cgaatgcaga gtggtcatgg
      361 aggatcacgg tttctactga tggaacctaa cattcgctcg cacgttagat cttatattct
      421 ggccaaaacg gaggtgatca tagtttcggc cgaggcgtga aatcttggtc ttcaggaagc
      481 cgaggcgtga aatcttggtc ttcaggaaat cgtgtgaccg tggccttcag gaaatgccac
      541 ttcctaacat cattccgcca gcattgttag ctgatggcgc tgcaacacat cgcgtcacac
      601 gttgccaacg gccaaagcaa acaagcccgc agacgcgaac tccgtaatcc ataaagcatg
      661 gtgaagaaat ggaaaagagc gcacaattcg aatccaagca tggcggcgcg atcagctcgg
      721 aagccacgat ttcagagtcg atggcgcgag gcaaagatgc cattggcgct gccgcgaacg
      781 aggcgatgac tgctgcgaga tctgatctgc agtcattacg gtctgaccta aacagcttga
      841 gagataccgt gacgaagttt gcatcccagg ctggaaccga agccgcgaaa tctgctcggc
      901 acgtagcctc gaacgtggcc ggccaggttg gcggcgctgt aaacgattta tccagcgagg
      961 gagccgagat ggcgtccgcg gcctccaaac aggcaaaaac ccttgcatct gagttggaaa
     1021 acatagcccg ccgcaatccg cttggagcga ttgccggcgc tgtcgtgttg ggtgctttga
     1081 tcggcctgat gggacgacgc agctgatgct gttcaagatc ctgaagctgt tcgggattga
     1141 tgttcccgcc cagatggcga gcctcgagcg gcgagtcgag gaggcggccg accacgtcaa
     1201 gcaggtcgcg cgggaggccg cgataatcgc cgcactgact gcgattgccg gcatcgcgac
     1261 tacgatggcg gtgggaatcg ggttgatcgc actctatcgt tggacagccg acgcttacgg
     1321 tgtttatgca gggcttgaag ttacagccgg gattatggtg gcaatcgccc tcctctccgg
     1381 tgttggtgcc gccatcaaag gcaagtctct gagttccaag gaggctagcg taccagacgc
     1441 tattcaattt gagagttccg acgtcgattg gaggccagct gagcctacct cagcggatcg
     1501 gccggcgacg cacggagagc ccgcggttgc agcaattcag acatctggga ctgcggcgag
     1561 cgacgtcatt gagccacttg cattactgtt atcgaagatc gtgagatacc caagccttgg
     1621 caatccggtc gtcgataggc tgatcgacag tctgcgggtg accagccacg gcgcggcaga
     1681 cgagacgatc aacagcgccg cgcacgtgat acgcaatggc gaccgaacaa acttggtgct
     1741 ggttctgacc ggagcggcat ttattgggtg gctgctatcg catcacgccg agccatgact
     1801 ccggaaccgc aactttagag cagttgagca gccccaaccg tatccgccat gatggcgccg
     1861 cgggcgccca ggggcttctc cttcccaacg gtcgtgtccc ttgcggtctg atgctcgatc
     1921 tcggaattca gcgctgcacc gaacaagatg acgattgccg acatccacat ccagatcatg
     1981 gttccgatgg cggctcccag cgatccataa gtaacgtcat agttggcgta gttggccaga
     2041 tagtaggaca gggcggcgga gccaacaaac caggcaaccg tcgcgaagac ggctccgacg
     2101 ctcagccact cccaccttgc cctgtggcga cttgggccat agcgatagag caccgcaagg
     2161 cccgccaaca taccaagcgc gagcgtcggc caacgcagga tccgcacgat gctttccgtc
     2221 aatgcgccga gcccaatccg atccagcaat aacggggtga tcacgactgc tccgaccgca
     2281 gtgagcattg ccgcaatcgc acatgccgtg aaacccaatg aaagaagatt gagccgaatg
     2341 agcccgcgtt tttcttgttc ctcgtaaacc acgtttagcg cgtcgatgat tgccttcatg
     2401 cccgaattgg cgctccagag cgccaatcca aaaccgaata caaatgcgaa gctcaacttt
     2461 acttcgcctt tggcgacgac gcgcgcgatt tgatcctgaa caaccgaaaa ggcatcggtc
     2521 ggtatcatct cggccgcgaa ggagagatgg ccgcgaatgg tcgccggagc agcgaacaat
     2581 ccgtaagagg agaccagtgc ggtaatggcc gggaacaacg ccagtagacc atagaacaca
     2641 actgcagccg agatagctac caaccggctt tgtgacactc gactgtgggt tcgccagaaa
     2701 atatccttcc atcccttcca ggggatatgg gacggcgaga cggcttcgcg gccgcggcca
     2761 agctcccgcg ctctttccat ttgccgcgcg agaggttcac gattgggcgc ctgcgcctcg
     2821 aagggacgcg gcgcacgccg cgacaagtcc ttttcgaagg ccgacagcgc aaatgccgcc
     2881 gcgacgatca aaagcgactt cacaaaggtc gcttgcgttt ggatctgcgg taacttctgc
     2941 aaagcttcct cgaaccccgc aggccggtgc aggctgagca gatttctgcg tacgcaaatg
     3001 tcccccgctt acctgccagt taagccaatc acggtaacgg taccaatttc tcactgggcg
     3061 gcgtaggaag ggtcgcgtgc ccaggaagag tcgctttcac cggcgacgac gctatgggca
     3121 attgcagtac ggtagcatgc tgaccgggtc ttagtctggt cagcagaacg atacgtcccg
     3181 acggaagctc cagggcatcg tgatgctcgt acttccggtt agggttaatc cgcctaaatc
     3241 gtgctgtttt ctccccgaga ttttcgattg ggaaagaacc aagtggatgt tcacattcaa
     3301 tatcgttgtc aaatgcaagt tccgtccccg gcgccaggca caccgccacg ccggggttgc
     3361 aaattgcggc gaacccacgc gtaatggcgt taccgaatgt tgtcgacgtg agctgatcgc
     3421 ctaccttcgc agggcggctt tgtacgcttt ccaaactgta gtcgcacatg tgcggctcct
     3481 gttctgtcca ttattatcag aaattcgctc gatcgacatt ttgttccctt gcacagaggg
     3541 tttgatctac tagcaattgt ctccggcgtc aggatttcgt caccgcctac cggaaccgca
     3601 gtctcggagc aggcgttata tctcatgtct cgaccactat atctcatgtc ccgacgaccg
     3661 gtatttcggc atctatgcta tttacccgga gattgggctg acggtggcgg cacacggagg
     3721 tctgcaaaat gctttcgacg atcctaatta ttgtcctgat cttgctgctt attggagcat
     3781 tgccgcattg gccctacagc ggaggctggg gctacggtcc cggcggac
//
LOCUS       DATILV010000164         2549 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_38195, whole genome shotgun sequence.
ACCESSION   DATILV010000164 DATILV010000000
VERSION     DATILV010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2549
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38195"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..613
                     /locus_tag="VLJ17_03730"
     CDS             <1..613
                     /locus_tag="VLJ17_03730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011582631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HSV22120.1"
                     /translation="DILVEKLIPRVESLKIGPSSDPQADYGPLVTKTHLNKVKDYVDL
                     GIKEGAKLVVDGRGFKLQGYENGNFLGGCLFDEVKPNMRIYKEEIFGPVLSVVRAKDY
                     EEAVRLPSEHEYGNGVAIFTRDGDTARDFVNRVQIGMVGVNFAIPVPLAYHTFGGWKR
                     SGFGDLNQHGPDSIRFYTKTKTVTSRWPTGTKEGAEFVIPTMK"
     gene            1021..1668
                     /locus_tag="VLJ17_03735"
     CDS             1021..1668
                     /locus_tag="VLJ17_03735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006933612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HSV22121.1"
                     /translation="MADFQLYCFAQSGNAYRAALMLNLIGADWKPVWIDFFRKGVQRT
                     PEYRTDVNEMGEVPVLVHGKKKLTQSGVILTYLSELTGKFKPQGEDEQLEALRWIIFD
                     NQKVNGFLGPFRFLKNYAKPPGDPAVLAFLKGRIDNNLAIVNKRLSGRQFLISDRPTI
                     ADISMTAYLYYPSDEFGFEIAKDHPAIAAWLDRMKALSGWKHPYELMPGHPLGTH"
     gene            complement(1671..2549)
                     /gene="pssA"
                     /locus_tag="VLJ17_03740"
     CDS             complement(1671..2549)
                     /gene="pssA"
                     /locus_tag="VLJ17_03740"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003882 - CDP-diacylglycerol-serine
                     O-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HSV22122.1"
                     /translation="MVFPPFDPAPPPFRRRFKAIPVRTLLPNLITLLALCAGLTAIRV
                     AVENKLDLALAAIVFAALLDGIDGRIARMLKGTSRFGAELDSLADFVNFGVAPALILY
                     FWGLHDLKSAGWIAALVFAICAGLRLARFNVMIDDPNKPAWAANFFTGIPAPAGAITV
                     LLPIYLDFLGVSAGLVTVWLTFLYTLVIAVLMVSRLPVFSGKRVGKRVPPEMVLPVFV
                     MVVLFFALLVSYPWQVLTVGTVVYLACLPLGWLSYREYQRKDATTAAASESASAGFSP
                     GVTEVDPDNDRPARLN"
BASE COUNT          598 a          756 c          712 g          483 t
ORIGIN      
        1 cgacatcttg gtcgagaagc tgatcccgcg cgtggaaagc ctgaagatcg gcccctccag
       61 cgacccccaa gccgactacg gcccgctcgt aaccaagacg catctcaaca aggtgaaaga
      121 ctacgtggat ctcgggatca aggaaggcgc aaagctcgtg gtcgacggtc gcggtttcaa
      181 gctgcaaggc tacgagaacg gtaacttctt gggcggctgc ctgttcgatg aagtgaagcc
      241 aaacatgcgc atttacaagg aggaaatctt tggccccgtg ctgtcagtgg tgcgcgccaa
      301 ggattacgag gaagcagtga ggctgccatc ggagcacgaa tacggaaacg gcgttgcgat
      361 ctttacccgc gatggcgaca ctgcacgcga cttcgtcaac cgcgtacaaa tcggtatggt
      421 gggtgtcaat ttcgcgattc ccgtgccgct cgcctatcac acatttggcg gctggaaacg
      481 ctccggcttc ggcgacctta accagcacgg cccggattca atccgctttt acaccaagac
      541 caagactgtc acctcgcgct ggcctaccgg caccaaggaa ggcgccgaat tcgttattcc
      601 aaccatgaag tgaggatgac ggtcaggacc acatctggca ccgtccttgt cgtcatgacc
      661 ctgacgggct gcgcaggcga acaggtttct ttgagctcgt ccgctcctgc cccggcaccg
      721 atcgatgcat ctttggtggg ccgttgggtt ttgaccgcac cgaatgcacc ctcttgcggt
      781 cttgaattta acggcgcttc gagcgcacgt gccggtaccg tcacaccgga tggaggttgc
      841 ccgggaaatt tttacacgag ccgacgctgg gcgatggaag gtgacgctct taccattgcc
      901 aacgacgaaa accagccact agcgcaattg aagtctgccg gcacccattt cgaaggacgg
      961 tccgctgccg gcatagcgct cacactgtca cgttaaacca ccttcaaccc gggacacctc
     1021 atggccgatt ttcagcttta ttgtttcgcc cagtccggca atgcctatcg cgccgcactt
     1081 atgctcaatc tgatcggcgc tgactggaag ccagtctgga tcgatttttt ccggaagggc
     1141 gttcaacgca cgcccgaata tcgaaccgat gtcaatgaga tgggcgaggt gccggttctt
     1201 gtccacggta agaaaaagct cactcaatca ggcgtgatac tcacgtacct gtcggaactt
     1261 accggaaaat tcaaaccgca aggtgaagat gagcaactgg aagcactgcg ttggatcatt
     1321 ttcgacaatc agaaggtcaa tggctttctc ggcccatttc gttttctgaa gaactatgcc
     1381 aagccgcctg gcgatcccgc cgtgttggcg ttcctcaagg ggcgcatcga taacaatctc
     1441 gccatcgtca ataagcggct gagcggtaga caattcctca tcagcgacag accgacgatc
     1501 gccgacattt cgatgaccgc ttacctctac tacccatcgg atgagttcgg cttcgagatc
     1561 gccaaggatc atccggctat tgcagcctgg ctcgatcgca tgaaagcctt aagcggctgg
     1621 aaacatcctt acgaattgat gccgggccac ccgctgggga cgcactgacg tcagttcagg
     1681 cgcgctggcc gatcgttatc ggggtcgact tccgtaacac caggcgagaa acccgccgag
     1741 gctgattcgc tcgcggcagc ggttgttgca tccttgcgct gatattcgcg gtaggacagc
     1801 caaccgagcg gcaggcaggc aagatagacg accgtgccga cagtcagcac ctgccacgga
     1861 tagctgacca gcaaggcgaa gaacagcacg accataacaa aaactggcaa gaccatttcg
     1921 ggtggcacgc gtttgccaac gcgttttccc gagaacaccg gcaaccgcga caccatcaac
     1981 accgcaatca ccagagtata gaggaaggtt agccacaccg tgacgaggcc cgccgacacg
     2041 ccgaggaaat ccaggtagat cggcagcagc acggtaatgg cgcctgctgg cgctggaatg
     2101 cctgtaaaga aatttgccgc ccacgctggc ttgtttgggt cgtcaatcat cacgttgaag
     2161 cgcgccagcc gaagcccggc gcatattgcg aacaccagcg cagcgatcca gcccgccgat
     2221 ttgaggtcgt gcagccccca gaaataaagt atcagcgccg gcgccacgcc aaaattgaca
     2281 aagtctgcaa ggctgtcgag ttccgcgccg aagcgcgacg tacctttgag catgcgtgca
     2341 atccggccat cgatgccatc aagcaacgcc gcaaacacga tcgcggccag cgcaagatca
     2401 agcttgttct ccaccgcaac gcgaatcgcg gtgagccccg cgcatagcgc tagcaaagta
     2461 ataagatttg gcagcagcgt gcgaaccgga atcgccttga aacggcggcg aaacggcggc
     2521 ggggcggggt cgaagggcgg aaataccat
//
LOCUS       DATILV010000165         3050 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1573090, whole genome shotgun sequence.
ACCESSION   DATILV010000165 DATILV010000000
VERSION     DATILV010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3050)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3050)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3050
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1573090"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(32..541)
                     /locus_tag="VLJ17_03745"
     CDS             complement(32..541)
                     /locus_tag="VLJ17_03745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22123.1"
                     /translation="MRHLFIATATMVALLATGAFPDRAGAADVVPSPYGPPPAYGPQS
                     GYGPRDDYGPPPAYGPPPAYSPSPRYNSRDDYGPPPAYGPPRRYDPPDDYGPPSDYGP
                     PPRPPHAIPYGASPVRPACDMQWRCAEGGPWACGWRRVCYPRSSAEVYARPYRGYGPP
                     RGPGYYGPY"
     gene            1176..1418
                     /locus_tag="VLJ17_03750"
     CDS             1176..1418
                     /locus_tag="VLJ17_03750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22124.1"
                     /translation="MTVVACESARLVVTRFGEISEAEIISRNAKHCNPLHRITEPFGR
                     RYASASLVSVLVLSSHGTNRSRFETLPQRQGSRNLV"
     gene            1771..2091
                     /locus_tag="VLJ17_03755"
     CDS             1771..2091
                     /locus_tag="VLJ17_03755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22125.1"
                     /translation="MRVRNKMTTEERGAMVDLSFQASGNDFLITAYSERGRQWLVDYT
                     NTITIEPEADAGRPPVTVGKCWIETKAEFERLYARAAAAGSGFTVAISPPVVASNSAC
                     EARQ"
     gene            2371..2649
                     /locus_tag="VLJ17_03760"
     CDS             2371..2649
                     /locus_tag="VLJ17_03760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22126.1"
                     /translation="MTIILRTQREQERVDGRQHIINWQADDFAVLDGETRIGRIYRTK
                     LPAGDKWMWVLQILGAQPPLTGSTDTLDDAEAGIAARYETVRSQWRRC"
     gene            2634..2825
                     /locus_tag="VLJ17_03765"
     CDS             2634..2825
                     /locus_tag="VLJ17_03765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22127.1"
                     /translation="MAKVLRLPPKPQAPPTRWDIYRAAARAILIGTVEAPDADAAIKE
                     AAKEFNIQDTKKLIAVRRR"
     gene            2822..3010
                     /locus_tag="VLJ17_03770"
     CDS             2822..3010
                     /locus_tag="VLJ17_03770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22128.1"
                     /translation="MMTQPHLKAQIAEELYIAMERLGAGPDLLSIIGSYGDTLDDEEI
                     FALLREYNATEQALKRSQ"
BASE COUNT          664 a          911 c          934 g          541 t
ORIGIN      
        1 aggacggatc accgagtgct aaatcgtccc ctcaataggg accgtaatag cctggaccac
       61 gtggcggacc atagccgcgg taaggtctcg catagacctc cgcggagcta cgcggatagc
      121 acacccgccg ccatccacag gcccagggac cgccttcggc gcagcgccac tgcatatcgc
      181 atgcggggcg tacgggcgaa gcaccatacg gaattgcgtg gggcgggcgt ggcggcgggc
      241 cgtaatcaga tggcgggcca tagtcgtctg gcgggtcata gcggcgtggc ggaccgtagg
      301 ccggtggcgg gccatagtcg tcgcgcgaat tgtagcgggg cgatgggcta taagcgggag
      361 gcggaccata ggccggtggc ggcccgtagt cgtcacgcgg gccatagccg gattgcgggc
      421 cataagcagg aggcggaccg tagggtgatg gaactacgtc cgcggctccg gcgcgatcgg
      481 gaaaagctcc cgtcgcgagc aacgctacca tggtggcggt ggcaatgaag agatggcgca
      541 tggcatcctc tattcgacct tgcctctatc gccctcaaaa accgcatagc gcagctcagg
      601 ggcttttttg tgagcaggct attggggcga ccgcgcggtt gtagcggacg atgaggccgg
      661 cgcgatcgca cacatagact cccactcccc ggcagaggaa cccgcaatca gattcatatc
      721 ggcgccaacg cgcctcagcg cctacctccg gcatgaaacc ccgcagctcg ctgcgctaaa
      781 attcttggtc agaccttgcc cgtcgggtca ccgagcggtg gcccagggtc ggcatcatca
      841 tgacgtcggg tcacccacga cctgaagaac tcccgttggc aatacgcttt cctagcaaac
      901 cctatgaacc gacagcgtgc tccgggaggc cgaggaaatg ccaaatcctc cgctcgagcg
      961 ccaagtgtaa gcgtatttct cgtgcgcacg acctatccga gtccggatca atcgcgtcat
     1021 ttctgacgct acctggacac gtcagctcaa tcctaataac cggactttat atgcctccta
     1081 attggcgagc tcacgggcga gccggcgtga actgtctagg cacgtgaacg gtcaagccaa
     1141 cgcgtccgcg tgttctcgct cttgcgagat ttgccatgac ggtcgttgcc tgcgaatctg
     1201 cccggctggt tgttacgcgc ttcggcgaaa tcagcgaggc tgagataatc tcgcgcaatg
     1261 caaagcattg caacccgctc caccggatca ctgaaccatt cggtcgtcgc tatgcaagtg
     1321 cgagccttgt ctctgtactg gtcttgagca gccatggcac caatcgctct cgttttgaaa
     1381 cgctccctca aaggcaaggt tccaggaatt tagtgtgacg agagccgcac gccggcggcc
     1441 agcgcgatat gccttgaatc gtccaagccc ccgtcggcgc ggctggtaac gggggctttg
     1501 ccgtcatgct gaagaacggg ccaatttgcc cccaaacttt gtttttgcaa ttaccaggcg
     1561 tgaaggctat tgtatgtcaa acgtatggcc tgggggaggc tggcgacttg actcacgctg
     1621 atgaacgatc cgaagtatcg gcgcgactgc gccgaggaaa tcggattcaa gccgagcaaa
     1681 tcggcgacga cgaaaccagt cggatgatgc tggagatggc gggatatgag cgtcgcgcaa
     1741 agcgcgccca cccaagatcg cgcgaaacca gtgagagtac ggaataagat gacgaccgag
     1801 gagcgggggg cgatggtcga cttgagcttt caagcatcgg ggaacgattt cctgattacg
     1861 gcatactctg aacgtggccg acaatggctt gttgactaca caaacacgat caccatcgag
     1921 ccggaggccg acgcaggccg accgccggtc acggttggaa aatgctggat cgaaaccaaa
     1981 gctgagttcg agcggctcta cgcccgggcg gcggcagctg gcagcggctt caccgtagcg
     2041 ataagccctc ccgtggtcgc gtcaaatagc gcatgcgagg cgcgccaata aatgcccggt
     2101 tgcggtaatg atagagcccg ctctcgaaat catacctccg ctcgcgtccc gtgaacatgt
     2161 aggcgtcgct ggtgttggtg ggcaggggtc ttaacgcgct ttggcctttg agtgtcgcgc
     2221 cgcacattga tccgtcaggg cgcatgcgag cgcgattttt gcgacgccgg cttggcgccg
     2281 cgaatctacc attccgggat gacagaccgc gcacaggggg acaaaccgcc acgctgacgg
     2341 ccttgttgcc ggcggcagat acttgcggtc atgaccatca tccttcgcac acagcgcgaa
     2401 caggaacgcg tcgacggccg ccaacacatc atcaattggc aagctgatga cttcgctgtg
     2461 cttgacggcg agaccaggat cgggcgcatc taccgaacaa agctcccggc cggcgacaag
     2521 tggatgtggg tcctacagat attgggcgcg cagcctccgc taaccggctc caccgatacg
     2581 ctcgacgatg cagaggctgg aatcgccgcc cgctacgaaa cagtgcgatc gcaatggcga
     2641 aggtgctgag gctgccgccc aagccgcaag cgccgccgac gcgctgggat atctatcgcg
     2701 ccgccgcccg agccatattg atcggcaccg tcgaggcacc cgacgcagat gccgcgatca
     2761 aagaagccgc caaagagttc aacatccagg acaccaagaa gctgatcgcg gtgcggcgca
     2821 gatgatgacg cagcctcacc ttaaggcaca aattgccgaa gaactttaca tcgccatgga
     2881 gcggctcggc gccggaccgg acctcctgtc catcatcggg agctacggcg atacattaga
     2941 tgacgaggaa atttttgcac tcctgcgaga gtacaatgcg acggaacaag ctctaaagcg
     3001 atcacaatag ccgcaacagc tgagacgccc gggggcatct gatcaaccag
//
LOCUS       DATILV010000166         9187 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_550617, whole genome shotgun sequence.
ACCESSION   DATILV010000166 DATILV010000000
VERSION     DATILV010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9187)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9187)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9187
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_550617"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..864
                     /locus_tag="VLJ17_03775"
     CDS             <1..864
                     /locus_tag="VLJ17_03775"
                     /inference="COORDINATES: protein motif:HMM:NF015500.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endo alpha-1,4 polygalactosaminidase"
                     /protein_id="HSV22129.1"
                     /translation="RTRRGFLKATAAFLSAPRSANLTVVNGLRMSANSIRWLAFYGER
                     ADEAILATYDIVVLDRGFQGSISMVAEEGARVCSYLSLGEIQTSDPLLDFVDRTVLLG
                     ENPDWPGTHRVDVRHPSWRSFVLDRTIPSIFAKGFKGLMFDTLETAPYLEQTDPARYH
                     GMRAAAVELVATIRARWPEVKLIVNRGYTLMPDLVDKIDAVIAESLITSPDQRSGGFA
                     WVDPRQVELQLSLLKPAVQRSPPLPILSLDYWFPDDAGTIAEIYRRERGLGHHPYVAT
                     QLLDQIVAEVR"
     gene            1105..2157
                     /locus_tag="VLJ17_03780"
     CDS             1105..2157
                     /locus_tag="VLJ17_03780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22130.1"
                     /translation="MSTTSIEDRFVLPAVPRDCEVGAGYGPKDHCAAGGEPRLLEMLS
                     LSHWQRLTLETLAFLASIAALKHRSFGITEIPGMPHPYWLVVLLASSQYGLIGGMIAT
                     VAASVFYLFELSPQSAAQDFYDYAGTIAVQPTVWLATALVLGGLRSLQIYHTVELAGR
                     LATCRQRASGLADGLERALAEIDALERRIAVDMSSVAALSRSFSKIDLSDRLAAAASF
                     GELFRVGADTTTFTIYLKSSDRYVPVLAIEDDVPVPTKSFEPLLPMTIDAMMKEDAGC
                     NARGQVRKSEFDLRRKVYLIPPSDVSTESLAAIVCQTQPPLQDSRQVHRRIEELSRAF
                     AAILSACPDRPSGGGR"
     gene            2154..3056
                     /locus_tag="VLJ17_03785"
     CDS             2154..3056
                     /locus_tag="VLJ17_03785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22131.1"
                     /translation="MNPAIALSGGPVSTAQGGYFPTGFVSRLLGFVVALLGWQIALLV
                     ALLCGLVELGAYLAIHLASGLVLVAWLVWRRSAVPVDSLCAAALQIVVWSAVAGPFGT
                     FVAAALAFRPASIRAPVMTGGDGESLRADTSEIKRATHVHLAMLDHRIRLEGAHHSRP
                     LMDVIAEGSQLEKLEALAVVYRKYDAGLAAVLKRALRDRDTSIRVLAATITAKLNGTF
                     SRKIGDCQAAVAAMPDLAQSWRNIAEARLAYANSGLLEASRARIEIESAIGDLARAAE
                     LDPIDRSTGDRLDGARHQLVAWRM"
     gene            3108..4592
                     /gene="pelF"
                     /locus_tag="VLJ17_03790"
     CDS             3108..4592
                     /gene="pelF"
                     /locus_tag="VLJ17_03790"
                     /inference="COORDINATES: protein motif:HMM:NF038011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GT4 family glycosyltransferase PelF"
                     /protein_id="HSV22132.1"
                     /translation="MAARTDVCMIIEGGYPYLVGGVASWADAFMRASPQLTFHVMAIS
                     ISGQARRRNFVVPENVVAVTDVLLDVCPPGQTLTYRNADRVEHVLQLIQNALTAGAGS
                     IFEELVEQLRITGFGQAALLDSKPGWRAMEKAYSRLLPNGPILDFFWSWRFLVRSLLA
                     VVSAPLPQARVFHAVATGFAGLVGSYAKIAAMRPLLLTEHGIYTNERRIDLAVADWLF
                     DSGAGGFDVSVRPVELRSIWLDAFRSFSRISYAFADVITTQYRANQAFQRTDGAPDDK
                     LRIIPNGIDATKFAAFPREAAPGPPIVLLIGRIVPIKDIRTFIMAVTLLKDLVPEVVA
                     VIIGPEDEDPGYAASCRELVHQLGIGASIQFLGRVPDVLKYLLTADVLALSSISEAQP
                     IALLEAAAIGLPVVSTDVGSCREIIEGFDGDPVEGCGGIVVTPCNPKALAEALASILL
                     HDEMRSQMGDVMRRRAANYYHKDRVKCLYEELYADLMAKPARFH"
     gene            4604..5980
                     /gene="pelG"
                     /locus_tag="VLJ17_03795"
     CDS             4604..5980
                     /gene="pelG"
                     /locus_tag="VLJ17_03795"
                     /inference="COORDINATES: protein motif:HMM:NF028243.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolysaccharide Pel transporter PelG"
                     /protein_id="HSV22133.1"
                     /translation="MTSVNITIESMTRQGSISSVFGAYLYAALLVAGPWIFTVLGLFF
                     LSAAACDGSCPDLTIFRSIIIYNSMYALIITSPLAFFSGRYVSEQLHRGCNDSVFYAL
                     VLSLLIFALLSIGLAVPFYFWATTLNATERIASIYNIVMIGCAWLIIPFIGALRAYNA
                     VLVAFGAAGLSMLVLGCMLHDPSATSLLLAFNGSFAIANSILLATVVLRFGTEITIDS
                     LLTNGLRRTWELPVAGMAYALGLWVDKIIMWYSAPSGGLIVAGALHTMPSYDTAMFWS
                     QLSSIPVIAVFFVHVETRFSALIQKFHARLQQRASLRELNEIIRKIATHVLSNLVGLF
                     AALVIVAGMMILLSFVFMTQLGLRPAYMVVLRVSLCSMTFYTSAMFCFNFLLHLDLRR
                     PALLIVLTYLGLNSVLTLAFLSFGPDLYGYGNLVASAVSLLVGLGLLLKELPWLHYHA
                     FIINNASL"
     gene            6003..6989
                     /locus_tag="VLJ17_03800"
     CDS             6003..6989
                     /locus_tag="VLJ17_03800"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012254789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HSV22134.1"
                     /translation="MWSKKKVVVTGAGGFIGSHLVEALVAAGAATTAVVRYNSGSLIG
                     NLAFMDAETRKTMRVVSGNIEDSDFVYQTIKGHDIVFHLAALIAIPYSYEAPRSYVRT
                     NVEGTLNVLEAARHYDVARVVHTSTSEVYGTALKTPIDESHPLQGQSPYSASKIAADK
                     LAESYYRSFATPVMTLRPFNTFGPRQSARAFIPTIISQALDCDEVRLGALTPERDMTY
                     VSDTVAGFMAAATAPGIEGMTINLGIGETYSVGWFAKRILNLMTIDKPIIQEEQRLRP
                     TQSEVMKLVSDNTRARDIMGWSPKVSLDDGLRRAIEFVRKYRSFYQTDGYVR"
     gene            7136..8494
                     /locus_tag="VLJ17_03805"
     CDS             7136..8494
                     /locus_tag="VLJ17_03805"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV22135.1"
                     /translation="MRAAPQFVLLVIVLLVLAAILLSPRRAEHFARLADEGRHKEVIA
                     LLQRRLAEQPRDPSLLAALGRSYAALGEYQNAVDTLDAYLAVRPDDFAARERQAELFV
                     QNGSIDRYLDALRRLVAARPSPTRITRLIELYRLYGRVEDELATLRVYADRAMLDPAQ
                     LERLGALLAERSNWPEARRWLELADQKAPPGGSAGRFLLLEVLLQSNEVDQAYRRAQA
                     WMTAWRNPYLSGKLIVRMAQSGFAVPASELAFKYADLMPEGILDMAGLFVRKEFPDLA
                     RQMLARWVDRTTNPTEEQLSAFVHASARVGDVHGPIVELVWLVRNGADPATQGRLAEE
                     LANAFGKSALVSIRPLLSNEALLTKPLFAAELSLFEGNREMARWFLNRTEPTRLLPEQ
                     RATWLALLQRVETHAGVFNRLAALWSDGRLPGELVRPFADEALKVGQVGMYDLVWNSM
                     RR"
     gene            8875..>9187
                     /locus_tag="VLJ17_03810"
     CDS             8875..>9187
                     /locus_tag="VLJ17_03810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22136.1"
                     /translation="MGTIARGIGMAIAGTAVVAVALADRAPCCRDLSSQQSASNGSPP
                     APTSSGKVALGIGDKLPTSSGKVALGIGDKLPTSSGKVALGIGDKLPTSSGKVALGIG
                     DK"
BASE COUNT         1789 a         2633 c         2659 g         2106 t
ORIGIN      
        1 cggacacgac ggggattcct gaaggccacc gcagcattcc tatcggcgcc gcgatccgcc
       61 aacctaacgg tggtcaatgg tcttcgcatg tcggcaaatt caattcgatg gttggcattt
      121 tacggcgagc gcgccgacga ggccatcctg gcgacatacg atatagtggt attggaccgc
      181 ggctttcagg gctcaatcag catggttgcc gaggagggag cacgagtgtg cagctatctc
      241 agcctcggcg agatccagac ctcagacccg ctccttgatt tcgtggatcg tacggtcctg
      301 ctaggggaga acccagactg gccaggaacc catcgcgtcg atgtcagaca tccctcatgg
      361 cgttcatttg ttcttgatag aacgattcca tctatcttcg ccaaaggctt taagggtctg
      421 atgttcgata cgctcgagac agcgccctac ctcgaacaga cggaccccgc ccggtaccac
      481 ggcatgcgag cagccgccgt cgagcttgtg gctactatcc gtgcgcgctg gccagaggtg
      541 aaactgatcg tcaatcgcgg ctacactttg atgcccgatt tggttgacaa gatcgatgct
      601 gtgattgcgg aaagcctcat cacgtcacca gaccagcgga gcggaggctt cgcctgggtt
      661 gatccccgcc aagtggagct gcagctttcg ctgctgaaac cggctgtaca gagaagcccg
      721 ccgctgccga ttctgagcct cgactactgg tttcctgacg acgccgggac aatcgcagaa
      781 atctaccgtc gggagcgcgg cctcggtcac catccatatg tcgcaacgca gttgctcgac
      841 caaatcgtgg cggaggtccg ctgattgcga gtgctaccgg cgctttgcag gcgctcgtta
      901 ggccgacgac agggggaggc aattcttacc tgactcaaat cagagttctt cattggcttt
      961 cttcgcggtc aacgaataat gaatgaacgg gcgtgcgtgg tttgcgcccg acaagtgagt
     1021 tcgccctgaa aattgcggtc ggccgataag attggattgt cgcccacgtc attgtttgcg
     1081 agcgagcgct ggcgagaaca aagcatgtcg acgacctcca tcgaggatag gtttgtgctt
     1141 ccggcagtcc ctcgagattg cgaggtcggg gcgggttacg ggcccaaaga ccactgcgca
     1201 gctggtgggg aaccgcggtt gcttgagatg ctctcgctct cccactggca gagactcacg
     1261 ctggaaactc ttgcgtttct tgcctcaatt gccgccttga agcaccggtc ttttggcatc
     1321 accgagatcc cgggtatgcc gcacccctat tggcttgtcg ttctgctggc ctccagccag
     1381 tacgggttga tcggcggcat gatcgcgacc gtcgcggcct ccgtgtttta tttatttgaa
     1441 ctttcgccgc agtcggccgc ccaggatttt tatgattatg ccggaacgat agccgttcag
     1501 cccaccgttt ggttggccac ggcgcttgtc ctcggcgggc tgcgcagtct gcaaatttat
     1561 cacaccgtcg agcttgccgg ccgtcttgct acgtgccgcc aacgtgcgag cggccttgcc
     1621 gatgggctcg agcgtgcttt ggcggaaatc gatgcccttg agcggcgcat cgccgttgac
     1681 atgagtagtg tggcggcttt gtcacgtagc ttctctaaaa tcgacttaag cgatcggttg
     1741 gctgccgcgg cgagctttgg tgagctattt cgggttggcg cagacacaac cacctttacg
     1801 atctacctga agagttccga ccgttacgtg cctgtgctgg cgatcgagga cgacgtgccc
     1861 gttcctacga aatcgttcga gccccttctc ccaatgacaa tcgatgccat gatgaaggag
     1921 gacgcggggt gcaatgcaag aggacaagtt cgaaaaagcg agttcgacct tagacgcaaa
     1981 gtctatctca tcccgccctc cgacgtttct accgagtcgc tggcggcgat cgtgtgccaa
     2041 acccagcctc cgctgcagga ctcaagacag gtccatcgcc gtatcgagga actcagtcgt
     2101 gctttcgcgg cgattctatc cgcatgcccc gaccgaccat ccgggggcgg gcgatgaatc
     2161 cagccatagc gctctctggc ggccccgttt ccaccgcgca gggaggctat ttcccaaccg
     2221 gattcgtaag ccgcctactg ggtttcgttg ttgcgctgct tggctggcaa atcgcgttgc
     2281 tggtcgcgtt gctgtgtgga cttgtcgaac tcggcgccta cttagcaatc catctcgcca
     2341 gcggcctcgt cttagtggcg tggctggttt ggcgacggag cgccgtcccg gttgacagtc
     2401 tgtgcgccgc ggccctgcag atcgttgtct ggtcggccgt cgccggaccg ttcggcacgt
     2461 ttgtggcggc tgctctcgcg ttcagaccgg cgagtattcg agcgcccgtc atgaccggcg
     2521 gtgacggtga aagcctgagg gccgatacct cagagatcaa gcgggccaca catgtgcacc
     2581 tcgccatgct ggaccaccgc atccgcctcg agggcgctca tcacagccgc ccgttgatgg
     2641 acgtcatcgc cgagggttcg cagttggaaa agcttgaggc actggctgtc gtgtaccgga
     2701 aatatgatgc cggattagcc gccgtgctga aacgcgcact acgggaccgt gacacatcga
     2761 ttcgcgtgtt ggccgccacc ataacggcca aactgaatgg cacattcagc cgcaaaatcg
     2821 gcgattgtca ggccgcagtg gcggctatgc ccgacctcgc gcaaagctgg agaaacatcg
     2881 ccgaagcccg acttgcctac gccaacagcg ggctcctcga agcgtcacgg gcacgcatag
     2941 aaatcgaatc tgctatcggg gatctggcgc gggcggccga acttgatccg atcgatcgaa
     3001 gtacaggcga tcgcctcgat ggggcgcgcc accagctggt ggcttggagg atgtaacggt
     3061 gctctgtgcg cctgtcgcgc caagcaagtt aggacaacgg gattgaaatg gccgcccgta
     3121 ctgacgtttg catgattatc gaaggtggtt atccctacct agtcggcggg gtggcctctt
     3181 gggccgatgc gttcatgcga gcgtctccgc agctcacctt ccatgtcatg gccatcagta
     3241 tttctggtca agcgcgtcgc agaaactttg tggttcccga aaacgtcgtc gctgtcaccg
     3301 atgttctcct cgatgtgtgc cccccagggc agacgttgac ataccgaaat gcggatcgag
     3361 tcgaacacgt tcttcagctt atacaaaatg cgctcacggc cggcgccggc tccatctttg
     3421 aagaactcgt tgaacagctg cgcattactg gcttcggcca ggcggcattg cttgactcca
     3481 agcccggctg gcgagcgatg gagaaagcct atagcagatt gctgcccaat gggcctatcc
     3541 tcgacttctt ttggtcctgg cgttttctag tgcgcagcct gttggcggtg gtgagcgcgc
     3601 cgttgccgca agcccgagtg ttccatgcgg tcgcgaccgg ctttgccggt ctggtgggca
     3661 gctacgcaaa aatagccgca atgcggcccc ttctcttgac cgagcacgga atctatacca
     3721 atgagcgtcg catcgacctt gcggtcgccg attggctgtt cgactccggc gccggcggtt
     3781 ttgacgtctc cgtcagacca gtagagctgc gctcgatttg gctggacgca ttccgatcct
     3841 tctcacgcat cagctacgcg tttgctgatg tcatcacaac tcaataccgc gccaatcagg
     3901 cctttcagcg taccgacggt gcaccggacg acaagcttcg tatcatcccc aatgggatcg
     3961 acgccaccaa atttgcggct ttcccgcgcg aggcggctcc cgggccccct atcgtgctac
     4021 tgatcgggcg catcgtgcca ataaaggata ttcgcacgtt cataatggct gtcacactgc
     4081 ttaaggatct cgtgccggaa gtggtggcgg ttatcattgg accggaggac gaggaccctg
     4141 gatatgcggc tagctgccgc gaactcgtcc atcaactcgg aatcggcgcg tcgatacaat
     4201 tcctcggtcg cgtacccgac gtgctaaaat atttgttgac ggcagacgta ctggccctgt
     4261 ccagcatcag cgaggcacag ccgatcgcgc tgctggaagc agctgcgatc gggctgccag
     4321 tcgtttcgac cgacgttgga tcgtgccggg agatcatcga gggttttgac ggcgaccccg
     4381 tcgaaggatg cggcggcatc gttgtcacgc catgcaatcc gaaagcgttg gccgaagcac
     4441 tcgcctcaat cctgcttcac gacgaaatgc ggtcgcagat gggagatgta atgcggcgcc
     4501 gtgccgccaa ttactatcac aaggaccggg tcaagtgcct ttacgaggag ctttacgccg
     4561 accttatggc gaagcccgct cgctttcact gatcacaaga atcatgacca gcgtcaatat
     4621 caccattgag tcgatgacac gacaaggcag tatttcgagc gtattcggcg cgtatctata
     4681 tgctgctctt ctcgttgccg gaccgtggat atttaccgtg ctaggcctct ttttcctcag
     4741 cgcagcggcg tgcgatggct cttgtccgga cctgaccata ttccggtcga tcatcatcta
     4801 caattccatg tatgcgctga tcatcaccag cccgctggcc ttttttagcg gtcgatacgt
     4861 ttccgagcag ctccatcgcg gctgcaatga cagcgttttt tatgcacttg ttctctcgct
     4921 cttaatcttc gctctgttga gtatcgggct cgctgtccct ttctatttct gggcgaccac
     4981 gcttaatgcc accgagcgga ttgcgagtat ttacaatatc gtcatgatcg gatgcgcgtg
     5041 gctcatcatt cccttcatcg gggccctgcg ggcgtacaat gcagtgcttg tcgccttcgg
     5101 cgcggccggc ctttcaatgc tcgtcctcgg atgcatgctc cacgatccgt cggcaacctc
     5161 gcttctgctg gcgtttaacg gcagtttcgc gattgccaat tcaatcctgc ttgccaccgt
     5221 ggtgttgcgt ttcggcaccg agatcaccat cgattctcta ttgacgaatg ggttgcgcag
     5281 gacgtgggaa cttccggtcg ccggtatggc ctacgccttg gggctgtggg tcgacaagat
     5341 cattatgtgg tactcagcac catccggtgg gctgatcgtt gccggtgccc tccacacgat
     5401 gcccagctac gataccgcga tgttctggtc gcaattgtct tccataccgg tcattgctgt
     5461 gttcttcgtc cacgtagaga ctcgtttctc cgctctaatt cagaagtttc atgcaaggct
     5521 gcaacagcgt gcaagcctac gcgagttaaa cgagattatt agaaaaatag caactcacgt
     5581 gctctcaaac ctggttggcc tgtttgctgc gctcgtgatt gttgccggga tgatgatctt
     5641 gctctcgttc gtattcatga cacagcttgg cctgcgccca gcctacatgg tcgtattgcg
     5701 ggtctcctta tgctccatga cgttttatac aagcgcaatg ttctgcttta atttcctgct
     5761 gcacctcgat ttgcgccgac cggctttgct gatcgttctc acttatctcg ggcttaacag
     5821 tgtcctgacc ttggcttttt tatcattcgg tccggatctc tatggatatg gaaatttggt
     5881 cgcttccgcg gtgagtttgc tcgtcgggct cggcttgctc ttgaaggagc tgccgtggct
     5941 tcactatcac gcattcatca tcaacaacgc ttcgctgtga acgaaaacga gtcaggtgac
     6001 cgatgtggag caaaaaaaag gtagtggtga ccggtgctgg cggtttcatc ggcagtcacc
     6061 tcgtcgaagc gcttgttgcg gccggagcgg caaccactgc ggttgttcga tataattccg
     6121 gatcgttgat aggcaatctc gcttttatgg acgccgaaac ccgcaagacg atgcgggtgg
     6181 tgagcgggaa tatcgaagac agcgacttcg tttatcagac cataaagggc cacgacattg
     6241 tctttcactt ggccgcccta atcgcaattc cctattccta tgaggcgccc cgtagctacg
     6301 tacgtaccaa tgtggaaggt acgctgaatg tactcgaggc cgctcggcac tacgatgtcg
     6361 cccgggtggt gcacaccagc acatcggagg tctatggcac agcgcttaag acgcccatcg
     6421 acgagagcca tccgctacag ggacagtcgc cgtactctgc ttcgaaaatc gctgctgata
     6481 agctggcaga gagctactat cggtctttcg caacgccggt gatgacgctg cgcccattca
     6541 acacctttgg ccctcgtcag agcgcgcgcg cgttcattcc gacaatcatt tcacaggcgc
     6601 ttgactgtga cgaagtccgg ctcggcgctc tcactcctga gcgggatatg acttacgtaa
     6661 gtgacaccgt ggccggcttc atggccgccg cgacggcccc cggcatagag ggcatgacga
     6721 tcaatctcgg catcggcgag acttattccg ttggctggtt tgccaagcgt atcctcaacc
     6781 tcatgaccat cgataagccg attatccagg aggagcagcg attgcggccg acgcagagcg
     6841 aagtcatgaa gctcgtctcg gataacacgc gggctcgcga tatcatgggc tggtcaccaa
     6901 aggtatcgct cgacgatggt ttaaggcggg ccatcgaatt cgtccgaaaa tatcgctcat
     6961 tttaccagac tgacggatac gtcagatgac tgccggcatc gaatcggaat ggctgcgtcc
     7021 ggccggggcc tgcgctgcgg ctttgttcga ctttccttga gatgaggaat tacattggcg
     7081 ctctgcaagc tgtttggacg gcgctgccgt tgcgctgaag tgacgggtca ttcacatgag
     7141 agcagcccct cagttcgtcc tgttggtgat cgtcctgctg gttctcgctg ctattttgtt
     7201 atcgccccgg cgtgcagaac actttgccag gcttgctgat gaaggtcggc acaaagaggt
     7261 catcgcgctc ctccagcgcc gattggcgga gcaaccccgc gacccaagcc tgctagccgc
     7321 gctcggccgc tcctatgctg cgctcggcga atatcaaaat gccgtagaca cactcgatgc
     7381 gtacttggcg gtgcgtcccg atgatttcgc ggcccgcgag aggcaggctg aactgttcgt
     7441 gcagaacgga tcaattgatc gttatctcga tgcgctaagg cggttggttg cggcccgccc
     7501 gtcccccact cgtatcaccc gtctcatcga actctatcgt ctgtacgggc gtgtggagga
     7561 cgaattggcc acgctgcgcg tctatgccga ccgcgcgatg ttggaccccg cccaattaga
     7621 gagactcggg gcacttctcg ccgaacggag caattggccc gaggctcggc gatggctgga
     7681 attggcagat cagaaagctc caccgggggg cagcgccgga cgatttctgc tgctggaggt
     7741 actcttacaa agcaacgagg ttgatcaggc atatcggcgg gcacaggcct ggatgacggc
     7801 ttggcgcaat ccataccttt ccggaaagct gatcgttagg atggcgcagt ccgggtttgc
     7861 tgtgccagca tccgaattgg catttaaata tgcggacttg atgcctgaag gaatactgga
     7921 catggccggc ctctttgtcc gcaaagagtt cccagatctg gcacgccaga tgcttgcccg
     7981 atgggtcgat cgcacgacca atccgactga agaacaattg agtgcgtttg ttcatgcatc
     8041 ggcgcgcgtc ggcgacgtcc atggaccgat cgtggagttg gtgtggttgg tgcgcaacgg
     8101 cgcagatccg gccacgcaag gacgcttagc cgaggaattg gcgaatgcat ttggcaaatc
     8161 tgccttagtt tctatccggc ccttgctgtc gaatgaggcg ctactcacga agccgttgtt
     8221 cgcagcggaa ctctcgctgt tcgagggcaa tcgggaaatg gcgcggtggt ttcttaatcg
     8281 aaccgaaccc actcggcttc taccggagca aagggcgacg tggcttgcac tattgcagcg
     8341 tgtagaaacg catgcaggcg tgttcaatcg cctcgcggcg ctgtggagcg atggacgtct
     8401 gccaggagag ttggtccgcc catttgctga cgaagcgctg aaggtgggcc aagtgggaat
     8461 gtacgactta gtctggaatt caatgaggcg gtgaccgacc gatcggagca gccatggcgc
     8521 cagtttgctg tgttgctctg tgtgcgcgcg ctacggtaag tctgttgcaa atcagagttt
     8581 tgcactggct ttgccaaagt aacaaactaa aacagaatcg aaccgtggtt tcgtgccggc
     8641 tgtcgatgcg agtcggtgcg gtgaccctca attgtgattg cctcgcacgt tgcggaccgg
     8701 taactctgtg ctgtcgatcg acgcagtagc cctgtacacc gtgccaacga acgcaagttc
     8761 gactgtaatt tcgcaacagc aattcaaact caccaaagag attttttttc gaaacagtat
     8821 cgcggccatg caaagccatt gcatgcaaat ccattgtaag agtggagcga tttgatgggc
     8881 accatagcca gaggcatcgg catggcgatt gcaggcactg cggtagtcgc cgtcgcgctc
     8941 gctgaccgcg cgccctgctg tcgagatctc tcctcccagc aatcggcgtc caacggatcc
     9001 ccgccggcgc cgacttcgtc gggaaaagtg gcgctcggaa ttggcgataa actgccgact
     9061 tcgtcgggaa aagtggcgct cggaattggc gacaaactgc cgacttcgtc gggaaaagtg
     9121 gcgctcggaa ttggcgacaa actgccgact tcgtcgggaa aagtggcgct cggaattggc
     9181 gacaaac
//
LOCUS       DATILV010000167         6455 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3107360, whole genome shotgun sequence.
ACCESSION   DATILV010000167 DATILV010000000
VERSION     DATILV010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6455)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6455)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6455
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3107360"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..968
                     /gene="tolB"
                     /locus_tag="VLJ17_03815"
     CDS             <1..968
                     /gene="tolB"
                     /locus_tag="VLJ17_03815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Tol-Pal system beta propeller repeat protein
                     TolB"
                     /protein_id="HSV22137.1"
                     /translation="RIKAEFRLWDVFGGAQLAGQQYFSTPDNFRRIAHIISDQIYERL
                     TGEKGYFDSRIVFVDETGPKDRRIKRLAMMDQDGAGVRYLTNGGDLVLTPRFSPSTQE
                     ITYMSFGQGDPRVYLFNTETQQREIVGNFPGMTFSPRFTPDGQRVIMSLQQGGNSNLF
                     VMDLRSKATTRLTDTAAIDTAPCYSPDGSRICFESDRGGQPQIYIMSANGGPAQRISF
                     GEGSYSTPVWSPRGDLIAFTKQSRGSFAIGVMGVDGKGERILTEGYHNEGPTFAPNGR
                     VLMFFRDPGGNAGPSLYTIDITGRNELRVPTPSFASDPAWSPLLA"
     gene            1242..1739
                     /gene="pal"
                     /locus_tag="VLJ17_03820"
     CDS             1242..1739
                     /gene="pal"
                     /locus_tag="VLJ17_03820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008136891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HSV22138.1"
                     /translation="MPKVMRLVRNAKFAVALAAALAAAACANKANELAAGVGGGGAAA
                     PGSQQDFVVNVGDRVFFESDSTDLTSQSRATLDKQAQWLSTYNRYAFIIEGHADERGT
                     REYNIALGARRSQAVRDYLASRGIEPSRMRTISYGKERPVAVCNDISCWSQNRRAVTV
                     LNASS"
     gene            1910..2809
                     /gene="ybgF"
                     /locus_tag="VLJ17_03825"
     CDS             1910..2809
                     /gene="ybgF"
                     /locus_tag="VLJ17_03825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014492411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system protein YbgF"
                     /protein_id="HSV22139.1"
                     /translation="MMLNRAAFAAITASWFLVSPTVAFAQVGTAELLVRIDRLENQIR
                     LLTGQLEQMQYRNQQLEAAVKRLQDDNEFRFQELAGRTGSRVTTTRPGTAPPIQPISP
                     GGRRSDAFDPVENPGAPGAPRALGSISPQPAPSISAQGLVGEEPIPRGPMGPSPRTPG
                     AAGPYAVATAPTSSPRDIFDIGNGYLQSKDYPLAEEAFREFLKKYPSDRLAAEAQYGL
                     GESLFQRQSYHDAANAFVVLSKKYETSVKAPDALLRLGQSLAAINEKELACVAFSDVG
                     RKYPRAPLSLKQAIEREQKRVRC"
     gene            2796..3941
                     /gene="tilS"
                     /locus_tag="VLJ17_03830"
     CDS             2796..3941
                     /gene="tilS"
                     /locus_tag="VLJ17_03830"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HSV22140.1"
                     /translation="MSAVDGPVGDVEADALFADLAAEPALILAISGGPDSTALLYLVA
                     RWRARRRLAPHLVAVSIDHGLRPQARHEAAVVKRLSEKLGVEHRTMRWSGAKPSNGIQ
                     AAARLARYRLLRTAARRARANCVLTAHTLDDQAETVLFRIARGSGLTGICGMARTVLI
                     DDLAAGFERPAAAARSARDGAGRNSGRSTTGRPNDVLLIRPLLDLPKARLIVTLKEAG
                     IAYVDDPSNADPRFARSRLRKLMPALVREGLTPQCLVRLARRVRRSEAAHEAAVSEAA
                     RRFGLGANSRNVALDRADWREIPAEIALRLLGRAIGTIGNEGPVEFGKLEALSNALGS
                     ALAGETPRFRRTLAGAMVSLRENCIVIEQAPARRFRPQDQELRRAGL"
     gene            4202..6121
                     /gene="ftsH"
                     /locus_tag="VLJ17_03835"
     CDS             4202..6121
                     /gene="ftsH"
                     /locus_tag="VLJ17_03835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HSV22141.1"
                     /translation="MNANLRNFALWVIIVLLLLALFTVFQNPGQRSVSQDISFSQLLN
                     DVDQGKVRDVVIQGPEIHGTYTDGHGFNTYAPNDPTLVQRLYGKGVTITARPLQDNVP
                     WFVSLLISWLPFIALIGVWIFLSRQMQGAGGKALGFGKSRAKLLTEAHGRVTFEDVAG
                     VDEAKQDLQEIVEFLRDPGKFQRLGGRIPRGVLLVGPPGTGKTLIARAVAGEANVPFF
                     TISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRHRGAGLGGGNDERE
                     QTLNQLLVEMDGFEANEGIILIAATNRPDVLDPALLRPGRFDRQVVVPNPDIVGREQI
                     LKVHVRKVPLAPDVNLKTTARGTPGFSGADLANLVNEAALMAARRNKRMVTQQEFEDA
                     KDKVMMGPERRSMAMTEEEKTLTAYHEAGHAIVGLNVPSHDPIHKATIIPRGRALGMV
                     MSLPERDRLSYSRDYCISRLASWFGGREAEILKFGPDKVTNGATGDIQGATQFARAMV
                     MQWGMSDKLGRVRYQGNEQEVFLGHSVTQTVNMSEETAEAIDSEIRSLIENAEKTARR
                     ILTEKREDFETLAQALLEFETLSGEEIKDLLAGRRPRRDTMVEPTAPRGSAVPPAGKP
                     RPRPETGGMEPQPQA"
     gene            complement(6161..>6455)
                     /locus_tag="VLJ17_03840"
     CDS             complement(6161..>6455)
                     /locus_tag="VLJ17_03840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22142.1"
                     /translation="ASPVAVIVLGLAVCAGCGMLCQATSTGYVTASAHEGRSSAIGLY
                     VSCFYIGGSIGGYMAGTAWSQAGWRGVVALSAIVLLIMGTIVTFVWSVQPTRK"
BASE COUNT         1252 a         1927 c         2032 g         1244 t
ORIGIN      
        1 gccgcatcaa agcggagttc cgcctgtggg acgtattcgg cggtgcccaa ctcgccggcc
       61 agcaatattt ctcaacgccg gacaatttcc gtcgcatcgc tcacatcatt tcggaccaga
      121 tctacgagag actaacgggc gagaagggct acttcgactc gcgtatcgtg ttcgtggacg
      181 agaccgggcc caaagaccgg cggatcaagc gtctcgccat gatggatcag gacggcgccg
      241 gtgtgcgcta tcttaccaat ggcggtgatc tcgtgctgac cccgcgcttc tcgccgtcga
      301 cccaggaaat cacctatatg tcgtttggcc aaggcgatcc gcgcgtctat ctgttcaata
      361 ccgaaaccca acagcgggaa atcgtcggca acttcccggg catgacattt tcgccgcgct
      421 tcacgccgga cggtcagcgc gtgatcatga gcttgcagca gggcggcaac tcgaatctat
      481 tcgtgatgga tctgcgttcc aaggcgacca cgaggctcac cgatacggcc gccatcgata
      541 ccgcgccgtg ctactctccg gacggcagcc gtatctgctt tgagtccgac cgcggcggac
      601 agccgcagat ctacattatg tccgcaaacg gcggaccagc gcaacgcatc agcttcggag
      661 aggggagcta ttcaaccccg gtgtggtctc cgcgcggtga tctcatcgcg ttcaccaagc
      721 agagccgggg cagcttcgca atcggcgtca tgggtgtcga tgggaagggt gaacgcattc
      781 ttaccgaggg ctatcacaat gagggcccga cgtttgctcc caatggccgg gtgctgatgt
      841 tctttcgcga tccgggcggc aacgcaggac cgtccctcta tacaatcgac atcaccggcc
      901 gcaacgaatt gagggtgccg acgccaagtt ttgcatcgga ccccgcatgg tcgccattgt
      961 tggcgtgaaa cagtcgtgtc ggtgacgcga ttaaaaaaaa tagttccgcc ttgacctcag
     1021 gtggacatct ccaaccgaga cgcttcgttg cctcgctatc gcctcgttaa ggcttcacta
     1081 accattcgaa ttggtttcca acaaatgagc accattagcg ggacgcagca acgcgatatc
     1141 aaggttgaca aaaccttcgc ttaacgaacg ccctgttaaa tcgaggggcg cgacccaggg
     1201 gctgggacca cgtggactgt gccaacagaa ggagaaaacg catgccgaaa gtcatgcgcc
     1261 tcgtccgcaa cgcgaaattt gccgtcgctc tggcggcggc gcttgcggcg gcggcctgtg
     1321 ccaacaaggc gaacgaactc gcggcgggag ttggcggcgg tggcgctgcc gctcccggga
     1381 gccagcagga cttcgtggtg aatgtgggcg atcgggtctt tttcgaatcc gattccaccg
     1441 atctcacttc gcaatcgcgt gcgaccctcg ataagcaggc gcagtggctc agcacctaca
     1501 accgttatgc cttcatcatc gaaggccatg cggatgaacg cggcacgcgc gagtacaaca
     1561 tcgctcttgg agctcggcgc tctcaggcgg tgcgggacta tctggcgtca cgaggcattg
     1621 aaccctcgcg gatgcggacg atctcctatg gcaaagagcg gccggttgca gtgtgcaacg
     1681 atatctcgtg ctggtcgcag aatcgtcgtg ccgtcacggt gcttaacgcg agctcttgat
     1741 cgtggggtaa tttcacgaaa cggaaagatt gtgcactttg tgggcaccgg ttgcgttcca
     1801 ggtacaggat aaggcaggtg cgcccttgag gttggcgtgc tgaagtcaca atttcgacgc
     1861 agctttggct attatttgcg actttccgtc agccatcaaa gatgtgcgaa tgatgttgaa
     1921 ccgtgccgcc tttgccgcaa ttacggccag ttggttcctg gtgagcccga ctgtcgcatt
     1981 cgcgcaagtc gggaccgctg agcttttggt caggatcgat cggctggaga atcagattcg
     2041 tctgctcacc gggcagcttg agcagatgca gtaccgaaat cagcagcttg aggcggcggt
     2101 caaacggctt caggacgaca acgaattccg gtttcaggag cttgccggcc gtactggatc
     2161 gcgcgtcact accacccgtc cgggaactgc accgccaatt caaccgatct cacccggcgg
     2221 tcggcgctcc gatgcgtttg atcctgtgga aaatcccggc gctccgggag cgcctcgtgc
     2281 actcggttca atctcccctc aacctgcgcc ctcgatctct gcgcagggat tagttggcga
     2341 agagccgatt cctcgcgggc ctatggggcc gtcgccgcga acccctggag cggccggccc
     2401 ttatgctgtt gcgacagcgc cgacatcgtc gccgcgggat attttcgata tcggcaatgg
     2461 gtacctgcag agcaaagact atccgctcgc cgaggaggcg ttccgcgagt tcttgaagaa
     2521 gtatccgtct gacaggctgg cggcggaagc ccagtatgga cttggtgaaa gcctgttcca
     2581 acgccagagc tatcatgatg ccgccaatgc attcgttgtg ttgtcaaaaa aatatgaaac
     2641 cagtgtcaaa gcgccggatg cgctactgcg gctcggccaa tcactcgccg ccataaatga
     2701 gaaggagctt gcgtgcgtgg ccttcagcga cgtgggccgc aagtacccgc gcgcgccgct
     2761 tagcctgaag caggcgatcg agcgggaaca aaagcgtgtc cgctgttgac ggcccagttg
     2821 gtgacgtcga ggccgacgca ttgttcgccg acctcgctgc cgaaccggcc ctgatactgg
     2881 cgatttccgg cgggcccgat tcgacggctt tgctatatct tgtggcacgt tggcgcgcgc
     2941 ggcggcggtt ggcgccgcac ttggtcgccg tatcgatcga tcacggcctg aggccgcaag
     3001 cccggcacga ggctgctgtc gtgaagcgcc tttccgaaaa gctcggcgtg gaacatcgca
     3061 ccatgcgctg gagcggcgcc aaaccttcaa atgggattca ggcggccgcg cggttggcgc
     3121 gttaccgcct gctgcgtact gcggcacgcc gcgcccgggc caattgtgtc cttacggccc
     3181 atacgctcga cgatcaggct gagaccgtgc tgtttcgcat agcccgcggc agcggcctta
     3241 ccggtatctg cggaatggcg cgcacggtgc tgattgacga tcttgctgcc gggttcgaac
     3301 ggccggccgc cgcggcccgt tctgcgcgcg atggggctgg gcgaaattcc ggcaggagca
     3361 ccacaggccg cccgaacgat gtgttgctga ttcggcctct gctcgacctg ccaaaagcgc
     3421 ggctgatcgt cacgttgaag gaggccggaa ttgcctatgt ggatgaccca agcaacgctg
     3481 atccgcgttt cgctcgctcc cgcttacgca agcttatgcc ggcgctggtg cgggaggggc
     3541 taacacccca atgcctcgtc cgtttggcgc ggcgggtgcg gcgcagcgag gctgcacacg
     3601 aagccgctgt gagcgaggcc gcaaggcggt tcggtctagg agcgaactct cggaatgtcg
     3661 cgttggacag ggctgattgg cgggaaattc ctgccgaaat tgctctacgc ctgcttggcc
     3721 gtgcaattgg aacgatcggg aacgaagggc ccgtcgagtt cggcaagctc gaggccctga
     3781 gcaatgcact gggatcggcc ttggcgggag aaaccccgcg attccgccgc acgctggcgg
     3841 gcgccatggt gtcgctgcga gagaattgca tagttattga gcaggcgccg gcacgccgat
     3901 tccgccccca ggatcaagaa ttgcgccggg ccgggctgtg acgcaccgca caaccaggct
     3961 ggcccgtaaa attcgctggg gcggaaaagc cctattcacc aacggagtgc aataattgcc
     4021 gaaatcagat agggctgctt ggcaggggca gggcgtgtac ctacattgtc gctgcggggg
     4081 ggccgagggg ttgcctaatc gtcgcgtcgt taaagtagct ggtttgtcgt aggctcaatg
     4141 cccaaggcaa acgatggtaa ggtgggcgat tgaaggtacc tcgcaccatg agggtcgctg
     4201 gatgaatgcc aatttgcgca atttcgccct ctgggtgatt atcgtgctgt tgctgctggc
     4261 gctgttcacg gttttccaga atcccgggca gcggtcggta tcgcaggata tttcattctc
     4321 ccaactgctt aatgacgttg atcagggcaa agtccgagac gttgtgatcc aggggccgga
     4381 aatccacggc acctatacgg acgggcacgg ctttaacacc tatgcgccga atgatccgac
     4441 gctggtgcag cgtctctacg gcaagggtgt caccatcacg gcgcgcccgc tgcaggataa
     4501 tgttccgtgg ttcgtttcgc tgctgatttc ctggctgccg ttcattgcgc tcattggcgt
     4561 atggatattc ctgtcccgcc agatgcaggg ggcgggcggt aaagctctcg gcttcggcaa
     4621 gtcgcgggcg aaacttttga cggaagcgca tggccgcgtc accttcgagg acgttgccgg
     4681 cgtcgacgag gcgaagcagg acctccagga gatcgttgaa ttccttcgcg atccgggcaa
     4741 gttccagcgc cttggcggcc ggatcccgcg cggcgtgctg ctggtcggtc ctcccggcac
     4801 cggcaagacg ctgatcgcgc gtgcggttgc gggcgaagcc aacgtgccgt tcttcacgat
     4861 ttcgggctcc gacttcgtcg agatgttcgt cggcgtcggt gcgagccgcg tgcgcgacat
     4921 gttcgaacag gcgaagaaga acgctccctg catcatcttc attgacgaga tcgatgcggt
     4981 cggccgtcac cgcggtgccg gcctaggcgg cggcaatgac gagcgtgagc agaccctgaa
     5041 ccagttgctg gtggagatgg acggcttcga ggcgaacgag ggcatcattc tcatcgcggc
     5101 caccaaccgt cccgatgtgc tcgatccggc attgctgcgc cccggccggt tcgatcgcca
     5161 agtggtggtg ccgaaccctg acatcgtcgg ccgcgagcaa atcctcaagg ttcacgttcg
     5221 caaggtgccg cttgcacccg acgtcaatct caagacaaca gcgcgcggca cccccggttt
     5281 ttccggtgcc gatctggcga acctcgtgaa cgaagctgcc ttgatggcgg cgcggcgcaa
     5341 caagcgcatg gtgacccagc aggaattcga agacgccaag gacaaggtga tgatgggtcc
     5401 ggagcgtcgg tccatggcca tgaccgagga ggagaagacg ctgacggcct atcacgaggc
     5461 tggccatgcg attgtaggcc ttaatgtgcc gagccatgat ccgatccaca aagcgacgat
     5521 catcccacgc gggcgcgcgc tcggcatggt catgtcgctg ccggagcgcg accgcctcag
     5581 ctacagccga gactattgca tatcgaggct tgccagttgg tttgggggcc gagaggcaga
     5641 aattctcaag ttcggcccag acaaggtcac caacggtgct accggcgaca tccagggcgc
     5701 gacccagttc gcccgtgcca tggtcatgca atggggcatg tcggacaagc ttggccgggt
     5761 gcgctaccag ggcaatgaac aggaggtgtt cctcggacat tcggtgacgc agacggtcaa
     5821 catgtcggag gagacggcgg aagctatcga ttcggagatt cgttcgctga tcgagaatgc
     5881 tgaaaaaacc gcacgccgga tcctgaccga aaagcgcgag gacttcgaaa ccctcgccca
     5941 ggcgctgctc gaattcgaga cactgtcggg tgaggagatc aaggatttgc tcgctggccg
     6001 tcgccctcgg cgcgacacga tggtggaacc aacggcgcca cgtgggtcgg ctgtgccgcc
     6061 tgccggcaag ccgcgcccac ggcccgaaac cggcggcatg gaacctcagc cccaggcgta
     6121 ggaggttcga ggcagaaaac gccgggcgtc gcccggcgtt tcattttcgt gttggctgca
     6181 ccgaccagac gaaggtgacg atggttccca ttatcaagag gacgatggcc gacagcgcga
     6241 ccacgccccg ccagcccgcc tggctccaag ctgtgcccgc catgtagccc ccaatgctgc
     6301 cgccgatgta gaagcagctc acatagagtc cgatcgcgga tgagcgcccc tcatgggcgc
     6361 tcgccgtcac gtatccggtt gaggtcgctt ggcatagcat cccgcagccg gcgcacactg
     6421 cgagaccgag cacgatcacc gctaccggcg acgcc
//
LOCUS       DATILV010000168         4488 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2340836, whole genome shotgun sequence.
ACCESSION   DATILV010000168 DATILV010000000
VERSION     DATILV010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4488)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4488)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4488
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2340836"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..673
                     /locus_tag="VLJ17_03845"
     CDS             <1..673
                     /locus_tag="VLJ17_03845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014493454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV22143.1"
                     /translation="ASLAHEITQPIASARNNARAGLNFLDRRPPKLSEVREALNCVVG
                     DADRAGSIVDRIRDQVRKTPPRKLHFDLNESLDEVLTLARSEITKNGVSVQIRLADGL
                     LPVYGDRVQLQQVLLNLILNAAEAMGSVKEGPRELSISTERDQAKGVLVAICDSGPGI
                     DPANRERVFQAFYTTKPSGVGMGLSICRSIIEAHGGHLWADPNQPRGAAFRFTFPGAE
                     NELTN"
     gene            complement(1196..1286)
                     /locus_tag="VLJ17_03850"
     tRNA            complement(1196..1286)
                     /locus_tag="VLJ17_03850"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1250..1252),aa:Ser,seq:tga)
     gene            2076..3578
                     /gene="istA"
                     /locus_tag="VLJ17_03855"
     CDS             2076..3578
                     /gene="istA"
                     /locus_tag="VLJ17_03855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HSV22144.1"
                     /translation="MRLYMEHRTTHDATVAAAKSGLSRASGYRIESDPRLPSQKKTPR
                     GRRRPDPLAAFWDSEIVPILQAAPGIRAIAVFEELRRRHPEITANVRRTLERRIRSWR
                     ALSGPERDVIFRQVHEPGRLGLSDFTDTSELRVTVAGAVLAHRLYHFRLAFSGFEHAH
                     VVLGGESYVALAEGLQNALWGLGGVPREHRSDSLSAAFCNMDRNTQEDLTQRYQELMR
                     HYGMTPTRNNLGVAHENGSIESSHGHLKKALEDALLLRGSRDFDDLDCYRRFVDEIVG
                     RHNANNRKRIELERPMLGPLPKRRTADYEEKIVIVTSSGGFMLRRVFYTAPSRLIGHR
                     LRVRLYDDRLECFLGATPMMTLRRGRPVSEQKGGHVVDYRHVIHALRKKPMALNNLVY
                     RDQLFPRPAYARAFEALHQTVGDKRACKLTVELLALAHDRGCEAELAKLIDAELDAGR
                     LPDLAILRERFAPNPTSMPAINVTFVPLSSYDELAAVHAVKATSNLEVAA"
     gene            3575..4399
                     /gene="istB"
                     /locus_tag="VLJ17_03860"
     CDS             3575..4399
                     /gene="istB"
                     /locus_tag="VLJ17_03860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HSV22145.1"
                     /translation="MTTTNNTVDAARVELLLNELRLPSMRLRWAKLAEQSDKEGWPAA
                     RFLATLVEHEVADRSCRRIERHLAEARLPAGKTLATFDFEAVPMVSKAQVMALASGDA
                     WLEKGANMLLFGPPGGGKSHLSAALGLALVENGWRVLFTRTTDLVQRLQVARRELSLE
                     NAITKIERYDLLILDDITYVTKDQAETSVLFELIAARYERRSMLITANQPFGEWGKIF
                     PDQAMTLAAIDRLVHHSTILEMNVESYRRREALDRKRGRGRPATHATIKKTEKSED"
BASE COUNT          938 a         1315 c         1353 g          882 t
ORIGIN      
        1 cgcatcgctg gcccatgaaa tcacgcagcc gattgcctcg gcgcgcaaca acgctcgcgc
       61 gggcctgaat ttcctcgaca gacggccgcc gaagttaagc gaagtcaggg aagcactcaa
      121 ctgcgtcgtc ggcgacgccg accgcgccgg aagcatcgtc gaccgcatcc gcgatcaggt
      181 cagaaagaca ccgccacgta agctgcattt tgatctgaac gaatctcttg atgaggttct
      241 cacgttggca cgaagtgaga tcaccaagaa tggagtctcg gtccagatac gcctcgcgga
      301 tggcttgctg cccgtttatg gggaccgggt tcaattgcaa caagtcctct tgaacttaat
      361 cctgaacgcg gccgaagcaa tgggctcggt taaagagggc ccacgcgagc tgtcgatcag
      421 caccgagcga gaccaagcga agggtgtgct cgtagcaata tgcgactccg ggcctggcat
      481 cgatccggca aatcgcgagc gcgttttcca ggctttctac accacgaagc ccagcggagt
      541 ggggatgggg ctgtcgattt gccggtccat catcgaagcc catgggggcc acttgtgggc
      601 ggatcccaat caacctcgag gcgctgcttt tcggttcaca ttcccgggtg cggaaaatga
      661 gctcacgaat tgaaagccgc acgaagacat cgtttcaact gctcgtcgtc aattggtttg
      721 cgaagaaaac agataactct ttctcagagc gcgtggcgcg cctcctcatc atcgggatag
      781 gctgtcacca ggatcgtcgg aatcgcatgc agtctcgatg aggtgcctct agagtttcaa
      841 atgggggatg cgttgtgcat cacagcaaaa acggatcgcc gacggcagag atgggtcact
      901 ttgagaccaa acctacactt tgatcgcagc accttgctgg tctcatgttc cctcatgagc
      961 tgacgttcta acgccttgcc gctgagcggc ttcgttccga gtggcaactc acaataggac
     1021 ccacgaaggg agagagcgtc gcgtgtgacc taacacctgc cgcaggttgc cgagtttggc
     1081 tctccgcgcc ctggaccccg cgagcacgtc tgggagcgat gatcgaggat ttcgggcacc
     1141 ttctccaaag tcaacccatg gcggagaccg tacgaagggc cgcgaatgaa gtgcttggcg
     1201 gaaggggtgg gattcgaacc cacgagggag cgtaaccccc tgccggtttt caagaccggt
     1261 gccttaaacc actcggccac ccttccctac caatgatctc aataacttag acgctgttcg
     1321 gttggaacgt tctgggaacg gaatcaggct ttggacccaa cttggaccca aagccttcta
     1381 ctccgcgcag gctttggcga acaaggcctc catcacttcg gccgccttgt cgtcagtgtt
     1441 cgtaaacagg tggccgtaga cgctcaatgt aattgttggc gatgcgtgcc cgaggcgccc
     1501 gtcttcgcgc ggtcatgcat cttacagatc acttcgcagg cagggtcatc gggagcgcaa
     1561 gaaagagtac aagaaaaacc tggcggcagg ttagccgtct gccgactgtg gctcgcacac
     1621 aggtgaagaa ttgctttgcg ttgttcgtct attgtaggcg gcggaacatc acgaggcggc
     1681 gacacgtctt ggccccgaac cggcgtcgcc gcagcaagta taacttatgt gaaggccgcg
     1741 aaaaatatat tgcgcatctt tgcccctcat gcctcaacgg tacctctcat cattcaaaaa
     1801 ggtgaccaga cctcgccggg ccacattctg ccccgcgaca atcaaggtga gacggcaacg
     1861 acaatcagga tgagactcag ccggggctgg gcggacggag cgagggcgta gcccgagcga
     1921 cggccggcca gccccggcgg cgcatttttc ctgtgggtta tcgctgcggg agggatgcgc
     1981 gctggcggtc gtgagcggcc cggaaaagtg tctggttcat ctccgaatcg ggggggaatc
     2041 agtctttgcc gggccgtcac atcaacgacc accagatgag gctttacatg gaacatcgaa
     2101 cgacacatga cgcgacggtt gcggccgcca aatccggctt gagccgggcg agcggctacc
     2161 ggatcgagag tgatccgcgg ctgccatcgc agaagaaaac accccgcggg agacgaaggc
     2221 cggatccgtt ggcggcattt tgggacagtg agatcgtgcc gattttgcaa gcggcgcctg
     2281 gcatccgggc gatcgcagtg ttcgaagaac ttcgtcggcg ccatcccgag atcacagcaa
     2341 acgttcgccg cacactggag cgccgcatac gcagctggcg cgcactatcg gggcccgagc
     2401 gagatgtgat ctttcggcag gtgcatgagc ctggccgtct tggcctgtca gacttcaccg
     2461 atacgagtga gcttcgcgtt acggtcgcag gggctgtgtt ggcgcatcgg ctctaccact
     2521 tccggctggc gttctccggc tttgaacatg cgcatgtggt gcttggtggc gagagctatg
     2581 tggcactggc agagggattg cagaacgcgt tgtggggcct tggtggcgtt ccccgcgagc
     2641 atcgtagtga cagtctctcg gcggcattct gcaacatgga tcgcaacact caggaagacc
     2701 tgacgcagcg ctatcaggag ctcatgcgcc attacggcat gacaccgacg cgcaacaatc
     2761 tgggtgtcgc acacgagaat ggttcgatcg agagctcgca cggccatctc aagaaagccc
     2821 tggaggatgc gctgttgctt cgtggcagtc gagacttcga tgacctggac tgctaccgcc
     2881 gttttgtcga tgagatcgtt ggccgacaca acgccaacaa tcgcaagcgc atcgagctgg
     2941 agcggccaat gctaggtccg cttcccaagc gtcggacagc cgactacgag gagaagattg
     3001 tcatcgtcac gtcgagtggc ggcttcatgc tgcgtcgagt cttctacacg gcgccgtcgc
     3061 ggctcattgg ccaccgcctg cgcgtgcgac tttacgatga tcggctcgag tgctttctcg
     3121 gcgcaacccc gatgatgacg ctacggcgcg ggcgaccggt gtcggagcaa aaaggcggcc
     3181 acgtcgttga ttatcggcac gtgatccacg cgttgcgcaa gaagccgatg gcgctgaaca
     3241 atctggtcta ccgcgatcag ttattcccgc gtcctgccta cgcgcgagcc ttcgaggcat
     3301 tgcatcagac tgtgggcgac aagcgtgcct gcaagttgac agtggagttg ctggcgctcg
     3361 ctcatgatcg cggctgcgaa gctgagctgg caaagttgat cgacgccgag cttgacgcgg
     3421 gtcgattgcc ggatctggcg atactgcgcg agcggtttgc gccaaatccg acatccatgc
     3481 cggcaatcaa cgtgacgttc gttccattga gttcttacga tgaacttgcc gctgttcatg
     3541 ccgtcaaagc aacctccaat ctggaggtcg cggcatgaca acgacgaaca acaccgttga
     3601 tgctgctcgt gtcgaactgt tgctcaacga attgcggttg ccgagcatgc gactgcgatg
     3661 ggccaaactt gcagagcaat ccgacaagga aggctggccg gcagcacgtt tcctggcgac
     3721 gctggtcgag catgaagtcg ccgaccgcag ttgccgccgc atcgagcgcc atctcgccga
     3781 ggcgcgtctg cctgccggca agacgctcgc tacgttcgac ttcgaggccg tgccaatggt
     3841 ctcgaaagct caggtcatgg cgctggcatc aggcgatgcc tggttggaga agggcgccaa
     3901 catgctgctc ttcggcccgc ccggcggcgg caaaagccat ctctcggctg cgcttggact
     3961 tgccttggtc gagaatggat ggcgcgtgtt gttcacgcgt acaaccgatc tcgtacaacg
     4021 gctccaggtc gctcgtcgcg agctctccct tgaaaacgcg atcaccaaga tcgaacgcta
     4081 cgatctactc atcctcgatg acatcaccta cgtcacgaaa gatcaggctg aaaccagcgt
     4141 gttgttcgaa ttgatcgcag cgcgttacga acggcgttcg atgctgatta cggccaacca
     4201 gccgttcggc gaatggggca agatctttcc cgaccaggcg atgacccttg cggctatcga
     4261 ccgcctcgtt catcactcca caatcctgga gatgaacgtc gagagctatc gccgccgcga
     4321 agccctcgac cgcaaacgcg gccgcggccg gccagcgacg cacgcgacca tcaagaaaac
     4381 cgagaagtcc gaagactgat tgacgttccg cgtcaatcaa agcgcgacaa tcaggcgttg
     4441 gccgagattg tcgcgttgat cggcggccgg ccacggcctc gcttgcgt
//
LOCUS       DATILV010000169         2239 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2850417, whole genome shotgun sequence.
ACCESSION   DATILV010000169 DATILV010000000
VERSION     DATILV010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2239)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2239)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2239
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2850417"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(78..1871)
                     /locus_tag="VLJ17_03865"
     CDS             complement(78..1871)
                     /locus_tag="VLJ17_03865"
                     /inference="COORDINATES: protein motif:HMM:TIGR03710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase subunit alpha"
                     /protein_id="HSV22146.1"
                     /translation="MKQTFAIGIGGAAGQGVATPGDIFAKIFSRRGLHLNAYNAYQSI
                     IRGGHTFLTIRTGPESVTNMGDRIDLLIPLNQDSMDRHLQLLTPGAACIYNSDTIKPG
                     PAADGVQLCPLPVSELVDITRNKVAQNTLAMGAALHMMGIGFQALEDVIREQFKKKGE
                     AVVTENVGVARAGIDYAAAHFAGFADPLPKTENRYAILSGNTAMAMGGAAAGVKFYCA
                     YPMSPSTGVLHWMAAHARKAGIMVRQVEDEIGVINMTIGAAHAGVRAMCATSGGGFAL
                     MSEGLGMSAMIETPVVVINCQRAGPSTGVPTKTEQGDLWQMLGAAFGDYPRVIAAPLD
                     IADCFKLIPEIFNIADRFQCPGLVLCDLLLSEGRLSVDPKDLDFGPPIERGELIADAN
                     GASSGVATNGDYKRYKFTESGISPRAIPGVPGHIHTVATDEHMEDGVLISDEFTNPVK
                     RRAMMEKRMRKVAGIEAAVPRPTLFGPRDADVTLIGWGSTKGVIEESCELLNDQGISA
                     NQLQIRWLVPLHGDAILETLKDSRHTIIVENNYSGQFARYLRSETSFVPDGHIRKYDG
                     EPFMPHHIVEAVKEQLAGQTKLSVPMHEIVV"
BASE COUNT          433 a          653 c          667 g          486 t
ORIGIN      
        1 gatcgactct gcctttcata tcggccacag tcaattgact ggcacgctgt acgctggtcg
       61 ccatatgctt ctcctcttca gaccacaatc tcgtgcatgg ggacggagag tttcgtttgc
      121 ccggcgagtt gttcttttac agcctccaca atgtggtgcg gcatgaaggg ttcgccgtcg
      181 tacttgcgaa tgtggccgtc tggcacaaag ctggtctcgc tgcgcaggta gcgcgcaaac
      241 tgaccgctgt agttattttc gacgatgatg gtgtgccgag agtctttcag agtttctaga
      301 attgcatcgc cgtgcaacgg cacaagccag cgaatttgca gctgattggc tgagatccct
      361 tgatcattga gaagctcaca ggattcctcg atcacaccct tcgttgaacc ccagccgatc
      421 aacgtaacgt cggcgtcgcg cggcccgaaa agcgtcggcc ggggaacagc cgcttcaatg
      481 ccggccacct tgcgcatgcg cttttccatc atcgcgcggc gtttgacggg attggtgaat
      541 tcgtcgctaa tcaatacgcc gtcttccatg tgttcgtccg tggcaacggt gtggatgtgg
      601 ccgggtacgc cgggaatagc gcggggggaa atgccgctct cggtgaattt gtagcgtttg
      661 taatccccat tcgtggcaac cccggacgac gcaccgttgg cgtcggcaat gagctcgccg
      721 cgctctatgg gggggccgaa atccagatct ttcggatcta cgctgagcct gccttccgac
      781 agcagcaaat cgcaaagcac cagacccggg cactggaagc ggtcggcgat gttgaatatc
      841 tcggggatga gcttgaagca atctgcgatg tccagcggag ctgcaatcac tcggggatag
      901 tcgccaaatg cggcgccgag catttgccaa aggtcgcctt gctcggtctt ggtggggacg
      961 cccgtggagg ggccggctcg ctggcaattg ataaccacca ccggcgtttc gatcatggcg
     1021 gacatgccaa ggccctcgct catcagggcg aagccgccgc ccgacgttgc acacatagcg
     1081 cggacgcccg cgtgggccgc gccgatcgtc atgttaatca cgccgatctc gtcctccact
     1141 tggcggacca tgattccggc cttacgtgcg tgtgctgcca tccagtgcaa aacgccagtc
     1201 gaagggctca tggggtaggc acagtagaac ttcacgcctg ctgccgcgcc acccatagcc
     1261 atcgcggtat tgccgctcag gatcgcatag cgattttctg tcttggggag tggatccgcg
     1321 aaccccgcga agtgggcggc ggcgtaatca atgccggccc gcgcaactcc aacgttttcg
     1381 gttaccacgg cctcaccctt tttcttgaac tgctcgcgga tgacgtcctc taacgcctgg
     1441 aacccgatac ccatcatgtg gagggcggca cccatcgcga gggtgttctg cgcaaccttg
     1501 ttccgggtga tgtcaaccaa ctctgaaacc ggaagcgggc agagttgcac gccgtcggcg
     1561 gcagggccgg gcttaatggt gtccgaattg tagatgcacg cagcgccggg agtgagcaac
     1621 tgcaagtggc gatccatgga gtcctggttg agcggaataa gcaggtcgat ccggtcaccc
     1681 atgtttgtga cgctttccgg gcccgttcga atcgtcagaa atgtatggcc gccgcgaatg
     1741 atggattgat aggcattgta ggcgttcaag tgaaggcccc gccggctgaa gatctttgca
     1801 aaaatatccc cgggcgtggc gacaccttgt ccggccgcgc ctccgatccc gatagcgaag
     1861 gtctgtttca tgacaccctc agtagagtgc tggccgatct acgaggcccc ggcgctcggc
     1921 caggctcaat tggttaagtt tattcgcgcg cgccagactc cttgtccgaa tgtccgggtt
     1981 gctcatccgg gtagccggag tatacaccca atccttcggt atgttcgttg gcaacacgcg
     2041 tattgaggag gagaatagcc ggctgccgcg attggtccaa gcagggttcg ttccgttgca
     2101 gctatcggcc gcgcacggag atgttgaggg cgcatgctgt cgaactgacc tcttgcatcg
     2161 acccagtgct agacgtaaga ttctggcacc aaccacgccg cacctctgag ccattcaatc
     2221 tgatcgggat gcaccatac
//
LOCUS       DATILV010000170         1660 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_808354, whole genome shotgun sequence.
ACCESSION   DATILV010000170 DATILV010000000
VERSION     DATILV010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1660
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_808354"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..261)
                     /locus_tag="VLJ17_03870"
     CDS             complement(<1..261)
                     /locus_tag="VLJ17_03870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006337800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HSV22147.1"
                     /translation="MNVQFQPHFRTAERRLPFECVALVLQGGGALGAYQAGVYEALAE
                     ADINPDWVAGVSIGAINSAIIAGNEPAERIAKLRTFWREITAN"
     gene            566..1261
                     /locus_tag="VLJ17_03875"
     CDS             566..1261
                     /locus_tag="VLJ17_03875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007534377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HSV22148.1"
                     /translation="MATPDVNNQDRPYHHGDLRRAIVSAALEILSETQSVEFSLRELA
                     RRAGVSHNAPYKHFADKRELLAAVSAAGFEALTKRMTREIAGHSNARAQLFAMLRAYV
                     RQGVENPALYRLMFGGYLSGPLDERPAIERAAAEKTKALFAEAIIDGALGQAIPNTSR
                     NERKIAGAILACWSLAHGLTLLLADGLVGPRKKSDELGESLVQGMLDGLQAKLPILPP
                     GTWIGGQAPRPSR"
BASE COUNT          335 a          504 c          479 g          342 t
ORIGIN      
        1 gttggcggtg atctcccgcc agaaggtacg cagcttcgcg atgcgctcgg ccggctcgtt
       61 tcccgcgatg atggctgagt tgatggcgcc aatggagacg ccggcgaccc agtcgggatt
      121 gatatctgcc tccgcaagag cctcgtagac tccggcctgg taggccccga gcgcaccccc
      181 accctgcaac accagggcga cacattcgaa cgggagacgc cgttcggctg ttcgaaaatg
      241 cggctggaat tgaacattca tggtgtggct ttcctttcaa gcagcccggc caccacgtcc
      301 gctggagcgc gtacgcgcgt cgccatggcc atcatgttct gtcccgaagc cggtcctcga
      361 atcttcacga tcgtattacg gcttaagttg acatcgccaa cttaggcgca taagtggtca
      421 gtgtcaactt cacttatttg tgaggtcgcc tgccgcgcgg acctcgaaaa aaatcggttg
      481 tggagcgtag gaaacccatc cttggtatgt tgacatcgcc aacttaagca gctaagtctc
      541 gataataaga tggattagcg cagctatggc cacgcccgac gtcaataacc aggatcgtcc
      601 ataccaccac ggggacttgc gccgtgccat tgtcagcgcc gcgcttgaga tcctgagcga
      661 aacgcagagt gtcgaatttt cgctccgtga actcgcccgc cgcgccggcg tcagtcacaa
      721 tgccccttac aagcactttg ccgataagcg agagttgctg gcggccgtct cggccgccgg
      781 gttcgaggcg ctgacgaagc gcatgacccg cgagattgcc gggcacagta atgcgcgcgc
      841 gcagctattc gccatgcttc gcgcatacgt tcgccagggg gtcgagaacc cagcgctgta
      901 tcgattgatg ttcggaggct acttgagcgg cccgcttgat gaacgccccg ctatagaacg
      961 agccgcggcc gagaagacga aggccttgtt tgcagaagca atcattgacg gcgctctggg
     1021 acaggccatt ccgaatacct caagaaatga gcggaagatt gccggcgcta ttctggcgtg
     1081 ctggtcgctc gcgcacggcc tcacgctgct tctcgccgac gggctcgttg gcccaagaaa
     1141 aaagtccgac gaactgggtg aaagcctcgt gcaggggatg ctcgacggac tgcaggccaa
     1201 attacccatc ttgccgcccg ggacctggat aggcggtcaa gcaccgcgtc catcgagatg
     1261 accccgaggc cagccagtca gctctctcct acgcttggtc gatggtgttg aaaaactcgt
     1321 cggcgagatc gtcttggctc tcgatggaat gcgcacatta acaactgatc cgtttccaaa
     1381 attggcccga ggccgaaatg tctgatcaac ccgagcatta ccggtcattg gggttgaccg
     1441 gacggccatc ggcgcagcga tcgtcgcttt tcttatcgct ttgtgggtgt tgcatttcct
     1501 cctgccggct ccgccaccga ccatcccgtg atcgtttgcc gcgattgtcg tccatgaagc
     1561 tcagatcacg ggagggtcag ctcgctcaac gccaaagccc gcaccgctcc gtttgtgcga
     1621 gaatttacga attcgccatg gacaggctgc cctcgaacgc
//
LOCUS       DATILV010000171         2474 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2850592, whole genome shotgun sequence.
ACCESSION   DATILV010000171 DATILV010000000
VERSION     DATILV010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2474)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2474)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2474
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2850592"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..727
                     /locus_tag="VLJ17_03880"
     CDS             <1..727
                     /locus_tag="VLJ17_03880"
                     /EC_number="1.1.1.3"
                     /inference="COORDINATES: protein motif:HMM:NF004976.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004412 - homoserine dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HSV22149.1"
                     /translation="TLDINGWDAAHKAIILASLAYGFWLDPSKIFVCGIDKVTASDIR
                     FADDLGYRIKLLATIKAGAGNAIEVRVCPTLIPKSHVLASVNGVYNAIAVRGDIVGET
                     LFYGRGAGQDPTSSSVLSDLAEASMGLQSPRFCYGFTSHDLYGKCQPIEDSVSKYYLR
                     LTVDDRPGVLAQIAGALGEAEIGILSVIQPETHFEGTAVLVLMIHDALFGAMAAAVAR
                     ISALGCVKAPPALLHVESLPQPA"
     gene            800..1897
                     /gene="thrC"
                     /locus_tag="VLJ17_03885"
     CDS             800..1897
                     /gene="thrC"
                     /locus_tag="VLJ17_03885"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HSV22150.1"
                     /translation="MAPESIVARNRREELMPPLYDHGVISRFRQHLPVSETTPIISLN
                     EGSTPLIHSPRLSERAEAEVFIKYEGLNPTGSFKDRGMTVAVSKALERGARTAICAST
                     GNTSAAAAAYAARANILCAVLLPAGKIASGKLVQAYLYGARVIALRGNFDDALRLVRE
                     LGGLEGIAIVNSINPDRIEGQKTAAFEIIEELGDAPDLHVLPVGNAGNITAYWKGYRE
                     FFVQSKATKLPRMMGFQASGSAPIFHNRIIESPNTVATAIRIGNPASWQSATSALQES
                     HGSIGVVTDQEILAAQSWLAKSEGIFVEPASAASIAGLFQLGKTGAHRIVLTATGHGL
                     KDPDTAMTTGDYRPIEAQPNLVSIRNILENA"
     gene            1931..>2474
                     /locus_tag="VLJ17_03890"
     CDS             1931..>2474
                     /locus_tag="VLJ17_03890"
                     /inference="COORDINATES: protein motif:HMM:NF012899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HSV22151.1"
                     /translation="MPLLVQKYGGTSVGTTERIQNVARRVLDTQQAGNSVVVVVSAMS
                     GVTDNLIKLARQLAPYPTERELDVLLATGEQTTIALTAMTLNAIGGKAVSLTGAQAGI
                     LTDGLHTKAKIANISPRQIRRYLADGFICIVAGFQGQTLQGQITTLGRGGSDLTAIAI
                     AAALRADHCEIYTDVDGVYSC"
BASE COUNT          518 a          766 c          681 g          509 t
ORIGIN      
        1 gacgctggat atcaatggtt gggacgctgc tcacaaggcg atcattctgg cctcgctcgc
       61 atatggcttc tggctggacc cctcgaagat cttcgtctgc ggcatcgaca aggtgacggc
      121 ctcagatatt cggttcgccg atgacttagg ctaccgaatc aagttactgg ccacgatcaa
      181 ggccggagcg ggcaatgcga tcgaggtgcg cgtctgccca accctgatcc caaaaagcca
      241 cgtcctggct tcggtcaacg gcgtctacaa cgccatcgcc gtgcgtggcg acatcgtcgg
      301 agagacgctt ttctacggac gcggcgccgg acaggatcca acatcgagct cggtcttgag
      361 cgatcttgcc gaggcctcga tggggctgca aagtccaaga ttctgttacg gcttcacttc
      421 gcatgactta tacgggaaat gtcaacccat cgaagattcc gtttccaagt actatctgcg
      481 cttaaccgtc gatgaccggc ctggtgtcct ggcgcagatc gcgggtgcgc tcggggaggc
      541 cgaaatcgga attctctcgg tcattcagcc ggaaacgcac tttgaaggca ccgcagtgct
      601 ggtcttgatg atccatgatg cccttttcgg cgccatggcc gccgccgtgg cccggatctc
      661 cgcactcggt tgtgtcaagg ctcccccggc acttctgcac gtggaatcct tgcctcagcc
      721 tgcttgatga gaaaatgaac tcggctcccc tgcaactctc attgccgaag gtggcttttt
      781 ttccgccctg aaaaacgcca tggcccccga atccatcgtc gcgcgcaacc gtcgggaaga
      841 gcttatgcca ccgctctacg atcatggtgt catcagccgc tttcggcagc accttccggt
      901 atcggagaca acaccgatca tttcgttaaa cgagggttcg acaccgctca tccattctcc
      961 gcgtctgagc gaacgcgccg aagccgaggt gtttatcaag tacgagggcc tgaatccaac
     1021 cggctccttc aaggaccgtg ggatgaccgt ggccgtctcc aaggcgctgg aacgcggcgc
     1081 acgcaccgct atttgcgcct ccacgggcaa tacctctgcg gctgccgcgg cttacgccgc
     1141 ccgcgccaat atcctttgcg cggtcctgct ccccgcgggc aagatcgcga gcggcaagct
     1201 cgtgcaggcg tacctttatg gagcaagagt gatcgccctg cgcggtaact ttgacgatgc
     1261 cttgcggctg gtccgtgaac tcggcggact cgaggggatt gccatcgtca attctatcaa
     1321 tccggaccgg atcgaaggtc aaaaaacagc cgcttttgag attattgaag aacttggaga
     1381 cgcccctgat ctccacgttc ttcccgttgg aaacgccggc aacatcaccg cctattggaa
     1441 gggctatcgt gagttttttg ttcaaagtaa ggcgacgaag ctgccccgga tgatgggctt
     1501 ccaagcgtca gggtccgccc ccattttcca caatcgaatc attgaatcgc ccaacacggt
     1561 tgcgacagcg attcgcatcg gcaatccagc cagctggcaa tccgctacct ccgccctgca
     1621 agagagtcac ggctcgatcg gcgttgtgac cgaccaggag attcttgccg cgcagagctg
     1681 gcttgcaaag agcgaaggga ttttcgtcga gccagccagc gcggcttcca ttgccggcct
     1741 gttccagctt gggaaaacag gcgcgcatcg gatcgtcctt accgctaccg gccatggact
     1801 caaagacccc gacaccgcaa tgaccaccgg cgactaccga ccgatagagg ctcagcccaa
     1861 tctggtctct attcggaaca tcctcgaaaa cgcctgaccg gaattcggga cacttcgaag
     1921 accatctaca atgccacttc ttgttcagaa atacggcgga acctcagtcg ggactaccga
     1981 acgcattcaa aacgtcgctc gacgtgtgct cgacacccag caagcgggaa actcggtcgt
     2041 ggtggtggtc tccgccatgt caggggtcac cgacaatttg atcaaacttg cccggcaact
     2101 ggcgccctac cccaccgaac gcgagttgga cgtcctcctg gcgacggggg aacagacaac
     2161 cattgccctc accgcaatga ctctcaacgc catcggggga aaggcagttt cgctcacggg
     2221 cgcccaggcc ggaattctga cggacggact ccataccaag gcaaagattg ccaacatttc
     2281 tccgcgccag attcgtagat acttggcgga tggattcatc tgcatcgttg cagggtttca
     2341 aggtcagaca ctgcagggac aaatcactac gctcggtcgc ggcggcagtg atcttacggc
     2401 gatcgccatt gcggccgctt tgagagccga ccactgtgag atctacaccg atgtggacgg
     2461 cgtctactcc tgcg
//
LOCUS       DATILV010000172         2124 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4128735, whole genome shotgun sequence.
ACCESSION   DATILV010000172 DATILV010000000
VERSION     DATILV010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2124)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2124)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2124
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4128735"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..593
                     /locus_tag="VLJ17_03895"
     CDS             <1..593
                     /locus_tag="VLJ17_03895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HSV22152.1"
                     /translation="RLICGFFSCDVRPFNPLLDSLPRFMRVGRDSLASHSLLDEFIRF
                     ATTEMGNRRAGSQSVLNRLSELMFVEVIRLYMDQLEGGNTGWLAGLRDPLVGRALTLL
                     HARPSHAWTLEQLASEAAASRSVLADRFNDLVGYPPIQYLTRWRMQIAARRLMDPTAR
                     IAGVAHEVGYESEAAFSRAFKKFVGQSPGQWRTRSS"
     gene            complement(715..1035)
                     /locus_tag="VLJ17_03900"
     CDS             complement(715..1035)
                     /locus_tag="VLJ17_03900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22153.1"
                     /translation="MATDENASVITAPQIVAFKRNTIITPLIDFGRLRRRAGARAFFS
                     SPLLRYSSSERDDGRDGRKPMNTKIMCRRLVDPPRFHLANDRQFFVICGIFAGNSDCQ
                     PRYK"
     gene            1007..1462
                     /locus_tag="VLJ17_03905"
     CDS             1007..1462
                     /locus_tag="VLJ17_03905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007608065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HSV22154.1"
                     /translation="MTLAFSSVAMAQNDIDAVHSNAVVIAVSGAAITGAASMYNPYRS
                     GYREGGVHTASGERYDSSTWAAAIKTNLRKEFGGVRYGARPKYALVEGAGKKAIIKIN
                     DVGPLTPGRIIDFNERTMRYFDPSLRRGVIDDVRVTPLSGDDWTPGPVA"
     gene            1746..>2124
                     /locus_tag="VLJ17_03910"
     CDS             1746..>2124
                     /locus_tag="VLJ17_03910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSV22155.1"
                     /translation="MTTIIECIPPAAGKPNPDLKALKSRQQAAWSSGDYAVIGTTLQI
                     VGERLAESMDLRAGQTVLDVAAGNGNATLAAARRGCEVTSTDYVESLLARARRRAEAE
                     EVQFKVADAENLPFASASFDAVVS"
BASE COUNT          453 a          601 c          634 g          436 t
ORIGIN      
        1 cgcggctgat atgcggcttc ttcagttgcg acgtgcgtcc gttcaatccg ctgctggatt
       61 ccctgccgcg cttcatgcgg gttgggcgtg actcgttggc ttcgcacagt ctgctcgatg
      121 aattcatccg ttttgccacc actgagatgg gcaatcgacg ggctggcagc caaagtgtcc
      181 tcaatcgtct ttcggagttg atgtttgtcg aggtcattcg gctctacatg gaccaacttg
      241 aaggcggcaa taccggctgg ctcgcgggat tacgcgatcc tctggtcggg cgcgcgctga
      301 cgctgctgca cgcgcggccg tcgcacgcct ggacactgga gcagctcgcc tcggaggccg
      361 ccgcctcaag gtcggtcttg gccgatcgat tcaatgatct ggtcggatac ccgccgattc
      421 aatatctcac ccgatggcgg atgcagatcg ctgccaggcg tctgatggat ccgactgccc
      481 gcattgccgg tgtggctcat gaagtcggct acgagtccga agctgcattc agccgggcct
      541 tcaaaaaatt cgtcggccaa tcaccaggcc aatggcgaac ccgttcgagc tagggcgcga
      601 ccgacccaca caacgcaacg ggcaatcgcg gttctcgatc tgtcagttta tccagcaaat
      661 ccggaagcgc agatcagcgt caataagcgg aagtgatcgc ttattggccc ttcgtcattt
      721 gtagcgcggc tgacaatcag agttgccagc gaagatgccg caaataacaa aaaattggcg
      781 gtcattcgca agatggaacc gcggtggatc gactaaacgc cggcacatga tctttgtgtt
      841 catcggcttg cgaccatcac gaccatcgtc gcgctcgctg ctgctgtagc gcagtagcgg
      901 ggatgaaaaa aaggcgcgcg ctccagcacg ccgacgaagc cgaccaaaat caatcaaagg
      961 agtgataatg gtgtttcgct tgaacgccac aatttgcggc gccgtaatga cacttgcatt
     1021 ttcatctgtt gccatggctc aaaatgatat cgatgcagtg cattcaaatg ctgtcgttat
     1081 cgccgtatct ggggccgcga tcactggcgc agcatccatg tataatccgt accggtccgg
     1141 atatcgggag ggcggcgtgc ataccgcttc aggggagcgc tatgattcct ctacgtgggc
     1201 ggctgccatc aaaactaatt tgcgaaagga atttggcggg gtccgttatg gcgcgaggcc
     1261 gaaatatgcc ctcgttgagg gtgcaggcaa gaaggccatc atcaaaataa atgatgtggg
     1321 gcctttgacg cctggtcgca tcattgattt caatgagcgg acgatgcgct atttcgatcc
     1381 aagcctgcga cggggagtaa ttgatgacgt aagggttaca ccactttccg gcgacgattg
     1441 gacgcccgga ccagtcgcat agaaacgatc gcagtgagaa cggtgctgca gcactgcctc
     1501 aagggcattg ggagtcgcct cgcaagcttc ctcctcctgg aatatcggag ggccgggcaa
     1561 gcttgccgca caatcggcag gcacgatgac gaatacggac gtttgagcaa aacgtccagc
     1621 atcctggtca ttcagcgtca gcggcgattt gcatagtgat tggatcaagg atgcacaccg
     1681 agtgcacctc gatgaatcgc ctggcgcaaa gcatcgcaac ccccgaattc ccagagagag
     1741 ccatcatgac tacgatcatt gaatgcatcc cgcccgcggc cgggaagcca aatccggacc
     1801 tgaaggccct gaagtcaagg cagcaggcag cctggtcgtc cggcgactat gccgtgatcg
     1861 gtacgacgtt gcagattgtc ggtgaacgct tggcggagag catggatttg cgcgccggcc
     1921 agaccgtgct cgatgtcgcc gccggcaacg gcaacgctac gctcgcggcc gcccggcgcg
     1981 ggtgcgaggt cacaagcacc gactatgtcg agtcgctctt ggcgcgcgca cgcaggcgcg
     2041 ccgaggcgga agaagtccag ttcaaggttg ccgacgccga gaacctgccg tttgcgagtg
     2101 cgtccttcga cgccgtggtt tcga
//
LOCUS       DATILV010000173         2792 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3108698, whole genome shotgun sequence.
ACCESSION   DATILV010000173 DATILV010000000
VERSION     DATILV010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2792
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3108698"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(694..1299)
                     /locus_tag="VLJ17_03915"
     CDS             complement(694..1299)
                     /locus_tag="VLJ17_03915"
                     /inference="COORDINATES: protein motif:HMM:NF024487.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA domain-containing protein"
                     /protein_id="HSV22156.1"
                     /translation="MAQVGTVDRFQGQEAAVVQISISMATSSGDDLPRQIEFHYSRNR
                     LNVAISRARCLVVIVASPRLPVRPSRASARPWPSSDFYMMLLPLPLIAIGPKPRSLRS
                     SRVAQLIDRLIHATIRQRRNKRLTAPKCGRTDGYASSLKLPRSERGATGFGITPVRCI
                     QLAPPLISGGTESSQTRRWSEVDSNPRSHLRHHRLEIALVI"
     gene            complement(1545..1895)
                     /locus_tag="VLJ17_03920"
     CDS             complement(1545..1895)
                     /locus_tag="VLJ17_03920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22157.1"
                     /translation="MQPTSGQGSSTEKSELTGQLDSIARAIFIIWTGTAMLVAMPWGW
                     FLVGLGILILAAQLARSRMNIKIEGFRVAWGTVFLVGGLWTVLNLASWPLAPIVFILL
                     GIVLLGKAVISIRR"
     gene            1942..2718
                     /locus_tag="VLJ17_03925"
     CDS             1942..2718
                     /locus_tag="VLJ17_03925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018784 - (S)-2-haloacid dehalogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006805 - xenobiotic metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="haloacid dehalogenase type II"
                     /protein_id="HSV22158.1"
                     /translation="MHSIGSVLGLKIGGGSPQGFEGTTMAQADDLRASIKVCMFDQYG
                     TVVDMQTGLTEAAAPFLAAKGWEGDPNSFVTWWRLTHFENSMIDALLHREHTSYREVG
                     HRSVAFVLERAGIPYTLDEVRDLVAHIERLRPFPEVPEALARLQTRYPLVVLSNGDPD
                     MLETAKRYHNIPFDRVISVAEAGSFKPHVATYTKAADLLGLPMDQILFVANHAFDCIG
                     AKSAGMRTAFIDRRSRPFGETPHQPDILMPTMADLADAIV"
BASE COUNT          591 a          801 c          868 g          532 t
ORIGIN      
        1 tattgggttg ttccgtcata acagcggcct gacgtctagc ggtagggcac cgagttttat
       61 cgggggaagg atggtgctag cgccgctcga agctccgggg gttgcggagc ggcggcacag
      121 ccgggaatca gcatgcccca ccagggcatc ttgcagacgg tggacgcctc aggtgtctcg
      181 gccggggccc atgttcgaga agccgtcgcc tcggccgatc ggccgtaggt agtttccgaa
      241 gctatccgtg atcggatctt gccggcatgt tcaataggtg cgagcaccca aggggcgtgc
      301 gggtgggttt gaaaatcctc taccgaaatc cccgacgacc cggcgaggcc ggcatcaagc
      361 tcgtccccga tcagtcgcag aaagcggcag agagggagat cctggaacga ttgggcttca
      421 ccgtagtcga gatcacgcct gcgcccttca ctctcacgcg ccatacccgg ccggcaattt
      481 gccgagaaca ttggagggta agatgaacga tttcggtcga cttcgtcgcg ggcggccatc
      541 gcggcctcaa cctaccgagg cgcgtcctcg aggtcatggc aaagagggtc aacgcaggtt
      601 cgtacatgac tccccgctgg agggagacgg attcgaacct tcggttcccc gttcgcgaag
      661 tggtgatttc cgctttccca aagtggaccg ggtctagatg acaagagcta tctcgagacg
      721 atgatgccta aggtgggacc tagggttcga atccacttcg ctccagcggc gagtctgcga
      781 actctcggtc cccccggaga tgagaggggg cgcgagctga atgcagcgca ccggggtaat
      841 cccgaatccg gtagcgccgc gctcagatct gggcagctta agcgaagagg cgtagccgtc
      901 ggttcggccg cacttcggcg cggttagccg cttgttccga cgttgccgga tggtggcatg
      961 gatcagtcgg tcaataagtt gggctaccct cgacgaccgt aacgagcggg gtttggggcc
     1021 gatcgctata agaggtagag gcagaagcat catatagaaa tcggaggaag gccatggtcg
     1081 ggcgcttgca cgagaaggtc gcactggtag ccgcggcgaa gcgacaatta ccacaaggca
     1141 tcgtgcccgc gagatcgcca cattcagccg gttgcgtgag tagtggaatt cgatttgccg
     1201 aggcagatcg tcgcccgaag atgtcgccat cgagatcgag atctgcacga ctgcggcttc
     1261 ctggccctgg aatctatcga ccgtgccgac ctgagcgatt ggtcagggct tcccagcgat
     1321 gggtgaaacg atcgagtcga gaaaatggca tgccgggagg taagaaccga ggagatatgg
     1381 gtgacgattt ccggggctga tctagtggtc aaaatcacgc gcttgagtcc gggtagtccg
     1441 caaccagaag cagccatcgc cgtccagccg gacgagcctc cacttagacc agaaatcgct
     1501 tgcaggagca tttgcttcga gccgacatga ccaagaatct gaggtcagcg cctgatgctg
     1561 ataacggctt taccgagcag cacaattcca agcaagataa aaactatcgg ggccagtggc
     1621 caagaagcta aattaagaac tgtccatagt ccgccgacga gaaacaccgt cccccaggcg
     1681 acccggaagc cttcaatctt gatgttcatc cgcgagcgag caagctgcgc ggccaggatg
     1741 agaatgccga ggcccacgag aaaccacccc caaggcatcg ccactaacat ggctgtaccg
     1801 gtccaaatga tgaagatggc ccgagcgata gaatcaagtt gcccggtaag ctcgcttttt
     1861 tcggtagacg atccctgacc ggaggttggt tgcacgctat tcatccctct tgcactcctc
     1921 cggctttagc ggggcatagt gatgcacagc atcggcagcg tgttgggttt gaagatcggc
     1981 ggtggctcgc cacaaggctt cgagggaaca acgatggcgc aggcggatga tctgagggct
     2041 tccatcaagg tttgcatgtt cgaccaatat ggaaccgtgg tcgacatgca gactggattg
     2101 accgaagccg cagccccttt cctggcggcg aaggggtggg aaggcgatcc caattccttc
     2161 gtaacatggt ggcgtctgac ccatttcgag aactcgatga tcgacgcgct gctgcaccgg
     2221 gaacatacct cgtatcgaga ggtcggccat cgctctgtcg ctttcgtcct agagcgcgcg
     2281 ggtattccgt atacgcttga cgaggtgcgc gacctcgttg ctcacatcga gcggctgcga
     2341 ccgtttcccg aggtgcccga ggcgctcgct cgactacaaa cgcgttatcc gctggtggtc
     2401 ctttccaatg gtgacccgga catgctggag acggcgaagc gctatcacaa tatcccgttc
     2461 gaccgcgtca tctcggtggc cgaagccggc tccttcaagc cgcatgtcgc gacctacacc
     2521 aaggccgcgg atctgttggg cttgccgatg gatcagatcc tgttcgtcgc caaccacgcc
     2581 ttcgattgca tcggcgccaa atccgccggc atgcgcaccg ccttcatcga ccgccgcagc
     2641 cggccgtttg gcgagacgcc gcatcagccc gacatcctga tgccgacgat ggcggacctc
     2701 gccgacgcga tcgtgtagga cggagctgga tggcaggagg gatcaatgac cacgaaagcg
     2761 gagttcaatc gcagcctcgg cctcaggatc aa
//
LOCUS       DATILV010000174        11392 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1830413, whole genome shotgun sequence.
ACCESSION   DATILV010000174 DATILV010000000
VERSION     DATILV010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 11392)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11392)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11392
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1830413"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..276
                     /locus_tag="VLJ17_03930"
     CDS             <1..276
                     /locus_tag="VLJ17_03930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22159.1"
                     /translation="QKRTLPLILCDGGSPTKEPAKTAKRERRHASDALSIHITVPPST
                     RVSDLQIVHLGKWFRQLDRVPDDGLHWQDRIHSGHTPKACKSIRFSQ"
     gene            534..1592
                     /locus_tag="VLJ17_03935"
     CDS             534..1592
                     /locus_tag="VLJ17_03935"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSV22160.1"
                     /translation="MRLRFFASIAGLCVAPLTAQAQPVTQSYPVVQGSAYKFEKIADG
                     VYYATVTRPGLGSNNVVIVNDSDVVIVDSGTSPAAARAFIEDIKKLTDKPIRYVVNTH
                     WHYDHTAGNQVFGPDVQIIATDYLYQMLATVDVLHREPFLTSQVTTLSARIDTLNRQI
                     EAEGNAPQKAALQKDLADAQRIQQNNSEIKVTPPTIHYSTKMVLNRGGREIDLLFLGR
                     GHTGGDTVIYLPKERIVCTGDLMESRLAYMGDAFFSEWITTLEALKKLDFAVDLPGHG
                     VPFTNKSLITAYQAYLTDLINQVTKLKNEGVSPDDAAKRVDLTAHAKDFPQITGLGAE
                     IRGVRRMYAWLDEQRAAK"
     gene            complement(1784..3496)
                     /locus_tag="VLJ17_03940"
     CDS             complement(1784..3496)
                     /locus_tag="VLJ17_03940"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HSV22161.1"
                     /translation="MARRKVPFQAAFLAGSMLAGSAVAADVTADRLVNPDKEPQNWLM
                     NHRTYDGQRYSPLSRINRDNVKNLKLAYAVPLGGSAGNEFTNATPLAEDGFLYVTDSW
                     NVLYKIDAHSGDVGRIVWRMDPKQDRQMRSRGAALWGNLVITGAGGFGNSPRIIATDK
                     ESGKVVWESSFSDTPEVTFTAAPLAIKDKIIVGAANGDQGVRDWIAGLDAATGKRLWR
                     QFTIPAPGEPGSESWKGNTNAWLTGGGALWVTGTYDPATNQTIWGTGNPVPMFDPFHR
                     PGDNLYTNSAISYDPDTGKMNWYFQFTPGDLWDYDEVGTHILIDGTIAGQVRKLITHS
                     ARNGFLYTYERSNGQPILAKPYMEVNWTKGIDQKTGKPLDYDPTKDVQTYAGIGNVIP
                     GEPLKKVCPSIAGGNNYWPSSYSPKTKLIYIPVLTACMFVSIDREKHTKERGWNGGSY
                     TTDERLESNLTAIDPTTGDIKKNVHLRYPNYSGTLATGGGLIFLALLDGTVAAFDDTT
                     LDEVWKINVGSGFSAPPMTFEAGGKQYIAIASGPSPSAKSRLVNTPELKEQRNALVLY
                     VFGL"
     gene            complement(3761..4954)
                     /locus_tag="VLJ17_03945"
     CDS             complement(3761..4954)
                     /locus_tag="VLJ17_03945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22162.1"
                     /translation="MRVRFSGSMLAVIAASGAVILVPVVPTAAQTPAPPATASAPVLT
                     TPWGEPDLQGIWTDETDAPLQRSPKYASQEFFTKEQRAELDKVRSGFIGRDRRSERGT
                     EADVAGAYNAVFTPLKPTGARTSRIVDPPNGRLPPLTAEAQKLAAAERDFRVALLQST
                     ETCKNNETACSGGKYDPKPSPRFADLSPRYNLGRMNRHDGPEDGTPPDRCLTAGLPEF
                     GGGIGSFRRIVQTPGGISIFYDVGQGQGWQRNIVMGGSSHLPASIRQWYGDSRGHWEG
                     STLVIDVTNFSPKTDFQGARENLHLVERWTPTGPNSLAYEVTVEDPTVWTRPWTAKQE
                     FTRQSDQENRIYTEPRCVEGNFGLPGLLHGRRVEELAFAEGRGSDPRTRDSIKGVEFE
                     QDPLQ"
     gene            5775..7730
                     /locus_tag="VLJ17_03950"
     CDS             5775..7730
                     /locus_tag="VLJ17_03950"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HSV22163.1"
                     /translation="MLRQLAFASFILLTPPPASAQTAKFQIEEATIDDIQVAIQRGEL
                     TSTRVVQLYLNRIRAYNGTCVNQPDGVLGLGPIAPIKNAHQLNALMTLNLRPPKREEL
                     GFDPRKARSMTDPVDADPAMFDALEVAAQQDAHFASTARLIGALHGVVFSIKDQYDTF
                     DMRTTAGMDAGYANDRPPRDATFVKRLREAGAIILAKANLGEMGTPNSRSSFGGPFCN
                     PYDTERSPGTSSGGSASSVAANLVTCSIGEETGGSIHHPAKNNSIVGLAPTQELVSRD
                     GMVGAGLNTRVGPLCRTVRDAARVLEVIAGYDPKDELTAFSVGRLPSEPYRSFANERT
                     LTGMRIGVIREHMDKKALNEADVAAIDLAEHAIGDLRQLGATIVDPGAGGALFQSCIY
                     KYVPLYRNRAFIEQYPNLFPADASGKPSTDRMSLLVDMFFDPSRVPAGFTIRNIAPAS
                     NAGLTKYMLDRYLRERGDAKIKSLRDLIDKSNYYRDIRPEAGFVDRKAALEEINSNVT
                     LDLANVFQERFVNQQVVLQCMAQENLDALVSPAGNIPAYILGAPVGPPLAGRTNSVWG
                     LLGQHGFSTLSVPMGFTTHVFDRVRDATARDGTRLVGPIPAKLPLGIMFFGRPFSEPT
                     LIRIASAYEAATKHRIPPPDFGPVPEP"
     gene            complement(7831..8061)
                     /locus_tag="VLJ17_03955"
     CDS             complement(7831..8061)
                     /locus_tag="VLJ17_03955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22164.1"
                     /translation="MRNHLIIVQKCGGVCLETPAKIRAVVRSLAKLPQVLAADQVARL
                     IEAPPGPGLQQKAALSSAYGAGLVVVGSSCRG"
     gene            complement(8062..9246)
                     /gene="nagA"
                     /locus_tag="VLJ17_03960"
     CDS             complement(8062..9246)
                     /gene="nagA"
                     /locus_tag="VLJ17_03960"
                     /EC_number="3.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018645977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008448 - N-acetylglucosamine-6-phosphate
                     deacetylase activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HSV22165.1"
                     /translation="MGQPASSVPVTIAAQRIFDGTDIRGPGSVRISQGRIESVTFGEA
                     EARASVHLPVDAILAPGFIDIQVNGGGGVLLNDQPTEAGVRCLVEAHRKEGTTGCLPT
                     LITDRSEVIERLATVAQACLKIPGVFGFHLEGPALNRSRKGIHPEAEIRVPDRRDLAA
                     IKSFGGCGRSIVTLAPECVPASMIDELIGTGLRIAAGHSDATAAEIRQAVDRGVSGVT
                     HLFNAMSQLNAREPGLVGAALEDDRLFAGIICDGIHVDRAGLRVAFRCKGRNRLMLVT
                     DAMPLVGTNDQQFMLQGRQITLHENRLTGPDGTLAGAHLTMIEAVRNAVSLIGTSLVD
                     ALIMASQTPAAFLGLTSQLGRIAPGYRADLVAFNPNFEVVGTWIGGVGSMDEANEASH
                     RG"
     gene            9362..10285
                     /locus_tag="VLJ17_03965"
     CDS             9362..10285
                     /locus_tag="VLJ17_03965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007601187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BadF/BadG/BcrA/BcrD ATPase family protein"
                     /protein_id="HSV22166.1"
                     /translation="MGTKRTTYLGIDGGGSRCRARIEDENGRVLGEANSGPATTRIGF
                     ERAWRSIMEAAEAAAAQAGLTRQDFALMHAGIGLAGLGRRGAEAALTKIAHPFASVIF
                     ISDGLAACLGAHRGADGAIVVAGTGSVGVGLIDGREIRLAGYGFPVSDEGSGADIGLQ
                     VIRLALRAVDCRGELTPLLSEVLGAFDHDPYQAVAWSEEARATDYAAFAPIVMRHANQ
                     GDPVGRRIVERAADAIGDLLDLFLARGIDRLSLVGGLADAMTPWLTPDLRARLRRPDA
                     DAAAGALLVARGRLDLPKRETDHEQASKLRV"
     gene            10305..11237
                     /locus_tag="VLJ17_03970"
     CDS             10305..11237
                     /locus_tag="VLJ17_03970"
                     /EC_number="4.2.1.126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018645975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016835 - carbon-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046348 - amino sugar catabolic process
                     [Evidence IEA];
                     GO_process: GO:0097173 - N-acetylmuramic acid catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HSV22167.1"
                     /translation="MATEEVDPRFADLDAWSLTSAMEAMWEGQLAAVAVIGPALPAIT
                     AATEAAKAALGDRGRIVYVGAGTSGRVAVQDGAELMPTFAWPNERVRFVVAGGDSAFV
                     TSIEGAEDDVDDAVTQINAVRLTAHDVVIAVAASGTTPFTVAALQQAGSFGAVTIGVA
                     NNRGTALLASAKFPILIETGRELIAGSTRMKAGTAQKVVLNLISSGIMLLLGRVYRGM
                     MVNIQPTNAKLKRRAEAMVAQIANCDPSHAARSLEQAEGNIKTAVLLALGVDRVDAET
                     ILKNCDGNLRRVFAELAKGRPVSQGSRSRSTRSD"
BASE COUNT         2223 a         3446 c         3487 g         2236 t
ORIGIN      
        1 cagaagcgta ccttgcctct gatcctgtgc gatggcggtt cgcccacaaa agagcccgct
       61 aagacagcca agcgcgagag acgccatgcc agcgatgcgt tgtctattca tatcacagtt
      121 cctccctcca ccagagtgtc cgatcttcag atcgtacatc ttgggaaatg gtttaggcag
      181 ttggatcggg tcccggacga tggcctgcac tggcaagatc gcattcatag cggccataca
      241 cccaaggcat gcaaaagcat ccgcttctct caatagtgcc tgccagaatc atattccgac
      301 ttttccaacg ctcaccgcca tggcttttga ctacgcaggc ttgcggtggc ttgagatctg
      361 cacttgattg ccgacctcga agggcctcca gtcgtgcatt cgtgatacaa gaccccaggc
      421 ggactcgtgg gtacagtcca aagcgtttcc cgcatcccct caaagaggga ttcgtgctag
      481 aaatgctcaa catcgggccg cactcattgc tcacgaaaac gagggaggtt gtcatgaggc
      541 tacgcttttt tgcatcgatc gcgggccttt gcgtcgcgcc tcttacggca caggcgcaac
      601 ccgtgacgca aagctatccc gtggtgcagg ggagcgcata caagttcgag aagatcgccg
      661 atggcgtcta ttacgcgact gttacccggc ctgggcttgg cagcaacaac gtggtgatcg
      721 tcaacgattc ggatgttgtg attgtggatt ccggcacctc gcccgcggcg gcacgggcct
      781 tcatcgaaga tatcaagaaa ctcactgaca agccgatacg atacgtcgtc aacacgcact
      841 ggcactatga tcatactgct ggcaaccagg tcttcgggcc ggacgtgcag atcatcgcga
      901 ccgactatct ctatcaaatg cttgcaacag tcgacgtgct tcatcgcgag ccgttcctga
      961 cgtcacaggt gaccacattg tcggcgcgga tcgataccct gaacaggcag atcgaggcgg
     1021 agggaaatgc accacagaag gcggccttgc agaaggattt ggccgatgcc caacgcattc
     1081 agcagaataa cagcgagatc aaggtaaccc ctccgaccat ccattattcc acgaagatgg
     1141 tgctcaacag gggcggtcgg gagatcgacc ttttgttctt gggccggggc catacgggcg
     1201 gcgacacggt catctatctt ccgaaggagc gcatcgtctg cacaggcgac ctgatggaaa
     1261 gccggctcgc ttacatgggt gacgccttct tcagcgaatg gatcaccact ttggaagcac
     1321 tgaagaagct cgatttcgcg gtggatctgc ctgggcatgg cgtgcccttc accaataaga
     1381 gcctcatcac ggcctaccag gcatatctga ccgatctgat caatcaggta accaagctca
     1441 aaaacgaagg cgtttcccct gatgacgccg caaagcgcgt cgatctcacc gcgcacgcca
     1501 aggactttcc acaaatcacc ggacttggcg ccgagattcg cggcgttcgc cgcatgtatg
     1561 cgtggctgga tgagcagcgt gccgcgaagt gatctgtagc cacacggaag ctataggttt
     1621 gagctggtat tggcgtcgac acgagtcatg gtcaaggtga ccaatggcga cgccgagagt
     1681 gcaacccagc aaagatgccg gacgttgcgg ggggcgagga tttctccacc acacgcagta
     1741 cttcggttgc tcgccgcccc attggcgatg accttgggct cagctacagc ccgaacacgt
     1801 atagtacaag cgcattgcgc tgctccttga gttctggcgt gttaacaagt ctgctttttg
     1861 ccgaagggct cggccctgac gcaatcgcaa tatattgttt cccgccggcc tcgaaagtca
     1921 tgggcggggc ggaaaagcca gacccaacat tgattttcca tacttcgtcg agcgtagtgt
     1981 cgtcgaaagc cgcgaccgtt ccatcgagca gcgcaaggaa gataagaccg ccgccggtcg
     2041 cgagcgtacc gctgtagttg ggataacgca ggtgcacgtt cttcttgatg tctcctgtcg
     2101 tcggatcgat agcagtcaga ttgctctcta gccgctcgtc ggtcgtatag gaacctccgt
     2161 tccaacctct ttccttcgtg tgcttttccc gatcgatcga cacgaacatg caggcggtca
     2221 agaccgggat gtagataagc ttggtcttgg ggctataaga cgacggccaa tagttgttgc
     2281 cgccggcgat cgatgggcag accttcttga gcggctcacc cggaatgacg ttgccaatgc
     2341 ccgcataggt ctggacgtcc ttggtcggat cgtaatcgag cggcttgccg gtcttctgat
     2401 cgatgccctt tgtccaattg acctccatgt agggcttggc aagtatgggc tggccgttgc
     2461 tgcgttcata ggtgtaaaga aaaccattgc gcgccgaatg ggtaatgagc ttgcgtactt
     2521 gcccggcgat agtgccgtcg atcaggatat gggtgccgac ttcgtcgtaa tcccacaggt
     2581 ctcctggcgt gaattgaaaa taccaattca tcttgccggt gtcgggatcg taggagatgg
     2641 cactgttggt gtagagattg tcgcccggtc gatggaatgg gtcgaacatc ggcaccggat
     2701 tgccggtgcc ccagatggtc tgattggtag ccggatcgta ggtgccggtc acccacaggg
     2761 cgccgccgcc ggtcagccag gcattggtgt tgcccttcca gctctcgctg ccaggctcgc
     2821 caggggccgg aatggtgaat tggcgccaga gacgcttgcc ggtagcggca tcgaggccgg
     2881 caatccagtc gcgcacgccc tggtcgccgt tggcggcgcc aacgatgatc ttgtccttga
     2941 tggcaagcgg cgccgccgtg aaggttacct ccggcgtgtc cgagaacgaa ctctcccaga
     3001 ccaccttgcc gctctccttg tcggtcgcga tgatgcgcgg cgagttgccg aagccgccgg
     3061 cgccggtgat gacgagattg ccccacagcg ccgcaccgcg gctgcgcatc tggcgatcct
     3121 gcttggggtc catgcgccaa acgatgcggc cgacgtcgcc tgagtgagca tcgatcttgt
     3181 agagaacgtt ccaggaatca gtgacgtaaa ggaaaccgtc ctccgcgagc ggcgttgcgt
     3241 tggtgaactc gttgccggcg ctgccgccga gcggcaccgc atatgcgagc ttgaggttct
     3301 tgacgttgtc acggttgatg cgggaaagcg gcgaatagcg ctggccgtca taggttcggt
     3361 ggttcatcag ccagttctgt ggctccttgt cgggattcac gagccggtcc gctgtaacgt
     3421 cggcagccac tgcggacccg gccaacatgc tgcctgccag aaatgcagcc tgaaacggga
     3481 ctttgcgtct tgccatgaag gcctcccatc gcgtttgcgc gccgcttcgc cgcgatcgcg
     3541 cttgacgcga gactacatga tccgcaaggc ggtgtccggc agcaaacgcc aggcgtcctt
     3601 cggacacggc cgctatcgga gagtaggccg ctgaaccggc ccaaatagcc cggactctcc
     3661 accgcccgag gcagaccggc cgtcagaagg ccgggttccc gacgaaccga ttgcgcggca
     3721 tgcgcgtccg tcgggcgccg gcccaggcgt tcaattggcg ttactgtagt ggatcctgct
     3781 caaactcaac gccctttata ctatctcggg ttctcgggtc ggagccgcgt ccctccgcaa
     3841 aagcgagctc ttcgacccgc cgtccatgca gcagccccgg gagaccaaag tttccttcga
     3901 cgcagcgcgg ctcggtgtaa attctgttct cctgatcgct ctgtcgggtg aactcctgct
     3961 tggcggtcca cggccgtgtc cacacagtcg ggtcttcgac agtgacctcg tatgcgagcg
     4021 agttcggccc cgtcggcgtc caacgctcga ccaagtgcag gttttcacgc gccccttgga
     4081 agtcggtctt cgggctgaaa ttcgtcacgt cgatgacgag ggtgctgccc tcccagtgtc
     4141 cgcgcgagtc gccataccac tgacggatgc tggccggcag gtgcgagctc ccacccatga
     4201 cgatgttgcg ttgccacccc tgaccctgac cgacgtcgta gaagatcgag atgccgcccg
     4261 gggtctgcac gatgcggcgg aaactgccaa taccgccgcc gaactccggc agcccggcgg
     4321 tcaagcagcg gtcgggcggc gtgccatcct ccggaccatc atggcgattc atacgcccta
     4381 gattgtagcg tggagaaagg tcggcaaatc gcggcgaggg cttcggatcg tacttgccgc
     4441 cgctacatgc cgtctcattg ttcttgcatg tttccgtcga ctgcagcaga gcgacacgaa
     4501 agtcgcgctc ggcggcggcg agcttctgcg cctcggcggt cagcggcgga aggcggccgt
     4561 tgggtggatc cacgatgcgc gaggtgcggg cgccggtagg cttcaggggg gtgaacaccg
     4621 cattgtaggc gccggcgacg tcggcttcgg tgccgcgctc cgaccgccga tcccggccga
     4681 tgaagccgga tcgcacctta tccaattccg cgcgctgttc cttggtgaag aactcctggc
     4741 tcgcatattt cggcgagcgc tgcagaggcg cgtcggtttc gtcggtccaa atgccctgca
     4801 ggtccggttc gccccatgga gtagtcaaca cgggggctga cgccgtggca ggaggagctg
     4861 gagtttgggc cgctgtcgga acgaccggca ccaaaatgac ggcgccggat gcagcaatga
     4921 ccgccaacat cgaacctgag aacctgacgc gcatgatagc ctcccatttg cgttcagctc
     4981 gctactctcc cgaagtttcc ccgatagcgt tgatgatagc gaccttcggc actggccgat
     5041 agcccggacg caaggtcgtt ctggggcccg ccgtgcggtg cggtcatctg cgcgtgttgc
     5101 ggcgttcgac ccagccgagc atcgccagcc gctcgcgaag cgcggtaatg ataggctgaa
     5161 cgagcgtcat ccccgcaaag cgcctacacg gcgcgcaggc tccgccgcta cgcccgcgcc
     5221 gcggccacgt tgcggctacg cctgtgaggt ctgcgatcaa atcccggcgc cgcatgattt
     5281 ttgctccgca gcaagttggt tgagcttcac tcagccgccc tgtccgcccg ttgccttaag
     5341 cgggcgcgca tgaggtcgat atgatttcgt agggtgcgca ccaccaaacc ggcctttgcg
     5401 gtgatcaagg tcacgtcgct tggcggctga tccttcgcca agtctctcac gcctctgggc
     5461 accaccacct tgttcggaaa cggatagagc gcgacaaggt atctgcctgg ggatagccgg
     5521 caagcccgat gcgctcgttg gcaggaacat gaatgccgcc gggcgtcttc aacttgatat
     5581 cacaataaca tagtgctcga tcctacggtt attgaggttc tctgcttgcg aagatgatgg
     5641 acccgcagat caattccggg acgcgagtga tgtacaaccg gagatcgacg tcgccggaac
     5701 gcgctttaaa gcacatcgtg gctggccgag gtgttccggc ggcgccgtga tgcaaagaaa
     5761 aggagaacgc caccatgctc cgtcaactgg cattcgcatc attcatcttg ctcacgccac
     5821 cgccggcctc tgcgcagaca gcaaaattcc aaatcgagga agcgacgatc gacgatattc
     5881 aagtggcgat ccagcgcggc gaattgacat cgacgcgggt ggtgcagctc tacttgaacc
     5941 gcatcagggc ctacaacggc acgtgcgtca atcagccgga tggggttctc gggctcggac
     6001 cgatcgcacc catcaagaat gcgcatcaac tcaatgcctt gatgaccttg aatttgcgac
     6061 cacccaaacg tgaagagttg gggttcgatc ctcgaaaagc acgtagcatg accgatccgg
     6121 tggatgctga tccggcgatg ttcgatgcac tggaagtcgc ggcgcaacag gacgcgcact
     6181 ttgcatccac cgccaggctc atcggcgctc tccacggcgt ggtgttctcc atcaaggacc
     6241 agtacgacac ctttgatatg cgcacgaccg cgggcatgga tgccggttat gcgaacgatc
     6301 gtccgccgcg cgacgcaacc ttcgtcaagc gcctgcggga ggcgggtgcg atcatcttgg
     6361 caaaggccaa cctcggagaa atggggacgc cgaactcgcg aagctccttt ggcggcccgt
     6421 tttgcaatcc ttacgatacg gagcgcagtc ccggcacctc cagcggcggc tccgcatcat
     6481 cggttgccgc aaacctggtg acgtgctcga tcggagagga aaccgggggc tctatccatc
     6541 accccgccaa gaataacagc attgtgggcc tcgcgccgac gcaggaactc gtcagtcgcg
     6601 atggaatggt tggcgctgga ctgaatacgc gcgtcggacc gctctgccgc accgtgaggg
     6661 atgccgcccg cgtgctcgaa gtgatcgccg gttacgatcc aaaagatgag ctgacggctt
     6721 tcagcgttgg ccgactgccc tcggagccct atcgaagctt cgcaaatgag cggacgctga
     6781 ctgggatgcg gatcggcgtc attcgcgagc acatggacaa gaaagcgttg aacgaggccg
     6841 acgttgctgc catcgatctc gccgagcatg ccattggcga tctgcgccaa ctgggggcca
     6901 cgatcgtcga cccgggtgcg ggcggagcac tgtttcaaag ctgcatctac aagtatgttc
     6961 cactctatcg caaccgggcg ttcatcgaac aatatcccaa tctcttcccg gcggatgcca
     7021 gcgggaaacc gtcgacggac cgcatgtctc tgctcgtgga tatgttcttc gatccatcgc
     7081 gcgtgcccgc aggtttcacg atccgaaata ttgctccggc gtccaatgcc gggctgacta
     7141 aatacatgct ggaccgctat ctcagggagc gcggcgatgc gaagatcaag tccctgaggg
     7201 acttgatcga caaatcgaat tactatcggg acatccgtcc agaggcgggt tttgtggatc
     7261 gaaaagccgc gctcgaggag atcaacagca atgtaacgct cgatttggca aacgtctttc
     7321 aagagaggtt tgtcaatcag caagtcgttc tgcaatgcat ggcacaagag aacctcgacg
     7381 ccctggtttc tccggcgggg aacattccgg cttatatcct gggtgcaccc gtcgggccgc
     7441 cattggcagg caggactaat tccgtctggg gcctcttggg acagcacggt ttttctacac
     7501 tatccgtgcc tatgggtttc accacgcatg ttttcgatcg cgtccgcgat gccacggctc
     7561 gtgatggtac gcgcctggtc gggcccattc cggcaaaact tccgctcggg atcatgttct
     7621 tcggacggcc gttctcggag ccgacgctca ttcggatcgc ttcggcctac gaggcagcaa
     7681 ccaaacaccg cattccgccg ccggacttcg gaccggttcc ggaaccgtag tggcctcgcc
     7741 acggccgcga agttcaaatg gcccggcgtt gccgacctgc gccgcgcgca aagtgtttgg
     7801 gcttgagcat gcgcttggaa tcgatatcgc ctacccgcgg catgacgacc ccaccaccac
     7861 cagaccagcc ccgtaggcgc tgctgagtgc ggccttctgc tggagaccgg ggccgggtgg
     7921 ggcctcgatc agccgggcga cctgatccgc ggcgagcacc tgcggcagct tggcgagact
     7981 gcgcacaacc gctcgaattt tcgccggtgt ttctagacag acaccgccac atttttgcac
     8041 gataatgaga tggttgcgca tctaacctcg gtgagaagct tcgttcgcct cgtccatcga
     8101 accgacacca cctatccatg tgccgacgac ttcaaagttc ggattgaagg cgacaaggtc
     8161 cgcgcggtat ccgggcgcga tccgtccaag ctgggacgta aggcccagaa atgccgctgg
     8221 cgtctgagag gccatgatga gagcatcgac aagggaggtt ccgatcagcg aaacagcgtt
     8281 gcgcaccgcc tcgatcatgg tgaggtgagc gcccgcgagt gtgccatcag ggccggtcag
     8341 gcgattttcg tgcaacgtga tctgccttcc ttgcagcatg aattgctggt cgtttgtacc
     8401 caccaatggc atggcatccg tgaccagcat caatcgattg cgtcccttgc agcggaaggc
     8461 aacacgcaaa ccggcgcggt cgacgtggat gccgtcgcag atgattcccg caaacagccg
     8521 gtcgtcctca agcgcggcgc ccaccaagcc tggctcccgg gcgttcaact gcgacatggc
     8581 attgaacaga tgggtcaccc cagagacacc gcgatcgacc gcctgtcgga tttcggctgc
     8641 ggtggcgtcg ctgtgaccag ccgcgatacg caatccggtg ccgatcaatt catcgatcat
     8701 ggacgccggc acgcattccg gggccaaggt cacaatagag cggccgcagc ccccaaaact
     8761 tttgatggcg gcgagatcgc gccgatcggg cacgcgtatc tcggcttccg gatgaatgcc
     8821 cttgcgagac ctgttgagcg ccggcccttc cagatgaaag ccgaacacgc cgggaatctt
     8881 cagacaagcc tgggcgactg tagccaatcg ctcgatcacc tcgctgcgat cggtgatgag
     8941 ggtcggcaag cagcccgtgg tcccctcctt gcggtgcgcc tcaacgaggc atcgaacgcc
     9001 agcctccgtt ggctggtcgt tgagaagaac gcccccgcct ccgttcacct ggatgtcgat
     9061 gaatccgggt gcaaggatcg cgtctaccgg aaggtggact gaggcgcgcg cctctgcctc
     9121 gccgaaggtg acgctttcaa tccgcccctg cgagatcctg accgaccccg gtccgcggat
     9181 gtcggtacca tcaaagatac gctgggcggc aatcgtgaca gggacggaag acgcaggttg
     9241 gcccatcagt attcatctca gaatggcagt cacggactcg tgaggagtcc cgtacaagac
     9301 ttcatacgta caccaaggca ctttgggagg acccggaacg aaaccttcgc gttaactctc
     9361 gatgggaaca aaacgtacca cgtatctcgg cattgatggg ggcggaagcc gctgccgcgc
     9421 ccgaatcgag gacgaaaacg gcagggtact cggtgaagcg aactccgggc ctgccacgac
     9481 acggattggc ttcgagaggg cctggcggtc catcatggag gccgctgaag cggcagccgc
     9541 acaggccgga ctgacgcgcc aggatttcgc gctgatgcac gccggaattg gccttgccgg
     9601 tcttggtcgc cggggcgcgg aagcggcgct caccaaaatc gcccatccct ttgcttccgt
     9661 catcttcatc agcgatggtc tagcggcttg tctcggcgcc catagaggcg cggacggagc
     9721 catcgtggta gccggtacag gctcggtggg ggtcggcctg atcgacggcc gcgaaatccg
     9781 tctcgcgggt tacggctttc ccgtctcgga cgaaggcagc ggcgccgaca tcggcttgca
     9841 ggttattcga ctggcgctgc gggccgtgga ttgccgcggc gagcttacgc cattgctttc
     9901 agaggtgctt ggcgcattcg atcatgatcc ttatcaagcg gtggcctggt ctgaagaagc
     9961 cagggccaca gactacgctg cgttcgcgcc gatcgtgatg cggcacgcca atcagggcga
    10021 tccggtcggc cgtcgcattg tcgaacgcgc ggccgatgcc attggcgatc tgctcgatct
    10081 gttcctggcg agaggaattg accggctctc gctggtgggc ggactcgcgg atgccatgac
    10141 gccctggctg acgcctgacc tgcgcgcccg cctgaggcgt cctgacgccg acgcggcggc
    10201 cggcgcgtta ctggtggcgc gagggcggct tgacctgccc aagagagaaa ctgaccatga
    10261 acaggcttca aagctccgcg tttaagggcg catggatcaa ctatatggct accgaagaag
    10321 tcgatccccg ttttgccgat cttgatgcat ggtcgctgac gtcagcgatg gaggccatgt
    10381 gggagggcca gcttgcggca gtcgctgtga tcggtcctgc ccttcccgcg atcactgcgg
    10441 cgacggaagc ggccaaggcg gcgttgggtg atcgcggacg cattgtgtat gtcggcgccg
    10501 gcacctcggg ccgcgtagcg gtccaagacg gcgccgagtt gatgccgacg ttcgcctggc
    10561 ccaacgagcg cgtccgcttc gtcgtcgccg gcggagacag cgcgttcgtc accagcatcg
    10621 agggcgcgga ggacgatgtc gatgatgcag tcacgcagat caatgccgtg cggctcactg
    10681 cgcacgacgt ggtgatcgcc gttgccgcca gcgggacaac accattcacg gtcgcggcgc
    10741 tgcaacaggc aggctctttc ggtgcagtga cgatcggggt cgccaacaat cgaggcaccg
    10801 cactgctggc atcggcaaag tttccgatct tgatcgagac cggccgcgag ctgatcgccg
    10861 gctccacgcg gatgaaggcg ggcaccgcac agaaggttgt gctcaacctg atctcctcag
    10921 ggatcatgct gctccttggc cgggtgtatc gcggcatgat ggtgaacatt cagccgacca
    10981 atgccaagct gaaacggcgc gccgaggcca tggtagcgca aatcgccaac tgtgatccgt
    11041 ctcacgcggc acgctcgctt gagcaggcgg agggaaacat caagacggca gtccttctgg
    11101 cgttgggtgt cgacagggtt gatgccgaga ccattctgaa aaactgtgac ggcaaccttc
    11161 ggcgtgtgtt tgctgagctc gccaagggtc gaccggtatc ccaaggtagc cgtagccgat
    11221 caacgcggag cgattgagcc gtgacgacat ccgcaatggc gagcgaaatc ggggaaagcg
    11281 ctgatgttgt cgccaaaatc gttcgtaacc gccccgccat gcgcgacatc gcacagcgaa
    11341 ttgggattgg cgctgccccc ctgtgcgtcg tgtgcggtcg gggaagctct gg
//
LOCUS       DATILV010000175        10806 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_552316, whole genome shotgun sequence.
ACCESSION   DATILV010000175 DATILV010000000
VERSION     DATILV010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10806
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_552316"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..1254)
                     /locus_tag="VLJ17_03975"
     CDS             complement(139..1254)
                     /locus_tag="VLJ17_03975"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV22168.1"
                     /translation="MRKMGVSRRFFAACGCCGGLASATVREDDATISRRNFVTGGVAA
                     LGLGAAASAGMPAKMLAQAKPLRIDVHHHLSPPPWVDALKKAGLETPPVTSWTPQRSL
                     DDMDKAGVATSILSAQTPGIGFLGSTEAAAVARASNEYAKTLAADHPGRFGTFALLPM
                     PHVDETLREIEYALDTLKADGVGFMTSYGDKFLGDAVFAPVMDELHRRKATAYTHPNN
                     PACCQNLAGIPPTIIEWGTDTTRTIASLIFSGTSARCRDVNFIFSHGGGTVTSLTDRF
                     SVQLPMNPKYKSFTHEGVIAELARFYYDTAQAANPIAMASLIRMVTTSQIVFGSDYPY
                     RTGAEHVKGLAEIFGPDDLRNIERENALKLVPRWRSA"
     gene            complement(1361..1936)
                     /locus_tag="VLJ17_03980"
     CDS             complement(1361..1936)
                     /locus_tag="VLJ17_03980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3828 domain-containing protein"
                     /protein_id="HSV22169.1"
                     /translation="MRVSKKMNNVGRAALSRRHIVAGFMVVIVVAVPAALTGKALARA
                     SHESAVKVFLSSIYQHYLGKSSGTAAGVELTNAKLVRSYFTVGLASLILEDRAAAATR
                     GEPPALDGDPFVGHQEWDISDLSIEVKDTGALKTTGIVTFTNSGKAEKVVLELLRSGK
                     DWRIADIQWDSGTLRGLYRRNAVQHSGAAPN"
     gene            2208..2480
                     /locus_tag="VLJ17_03985"
     CDS             2208..2480
                     /locus_tag="VLJ17_03985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22170.1"
                     /translation="MRWMLSIAVILTPFAAHAVVVRAGLTGNDTGGIIQWTPETDLTY
                     LDIATAHCARWNRYASITSVHRMYGDYIGFQCVVDRRYDPRRGWAH"
     gene            complement(2502..5045)
                     /locus_tag="VLJ17_03990"
     CDS             complement(2502..5045)
                     /locus_tag="VLJ17_03990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HSV22171.1"
                     /translation="MVDRNERRGSIALVLLVAAGLIVAASGLMLVGHNQAGSYVMFLL
                     AVLGMIGVFSLFALAAGILRISGREASNSTLEQVVEHAHEGIVVTDADGRVLYANAAY
                     RAFSGAVGMPDVRPVERVFVGDPEASEAVYRLLKASRDGRRLQEEVRITAQHGEPARW
                     LRLRVRPLGAVGAPDGAQKASVWTVADVTRDRERQENVFQELQQAIDYLDHAPAGFFS
                     VDGNGDIGYINATLAGWLDYDLAQVGSGVLRLADLLPGDSAALLTTLSAHPGEVKTDI
                     LDLDLRRRDGRTLPVRLYHKVAFAADATPGASRTLVLNRAGGASTDALRDAEVRFVRF
                     FNNTPMAIATVDRNGRIARNNALFAHLFQNVLKGEAAPPLGRAIRGVVAERDRAALDD
                     ALAQAASGRGDITPIDAALAHGGERWARFYVTPVEEAERDSEAAIVYAIETTEQRVLQ
                     RQFDQAQKMESAGKLAGGIAHDFNNVLSSIMMATDFLLTAHKPSDPSFQDIIQIKHDA
                     NRAAGLVRHLLAFSRRQTLRPQVLDLGEALSDLSMLLRRLIGERIMLDLVPPGSDLWA
                     VKADLSQFEQVIVNLAVNARDAMPEGGKLTLRAANVTGAESRHPALKGMPPGEYVLVE
                     VSDSGTGISDDIIDQIFEPFFSTKEVGKGTGLGLSTVYGIVKQTGGFIYPESTIGRGT
                     TFRIFLPRHIPTAEETAPDAAAEQGVPIRLDKLAPKPADDTGQGTILLVEDEESLRGL
                     NARGLTSRGYTVLQAANGSEAVEAFDSYFGKIDLVVSDVVMPEMDGPTLLTKLRSRDP
                     NVKIIFVSGYAEEAFEKHLPEGEKYRYNFLAKPFTLKQLVGAVKETMGK"
     gene            complement(5547..6593)
                     /locus_tag="VLJ17_03995"
     CDS             complement(5547..6593)
                     /locus_tag="VLJ17_03995"
                     /inference="COORDINATES: protein motif:HMM:NF024039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HSV22172.1"
                     /translation="MTSRHVSDSSGLAELPTAVGGIARLAYAKCERAGIKAGALLHKA
                     GLTRVQIDDPQTRLKVASQIKFLNLAAKALGDEFLGFHLAQAFDLREIGLLHYVMASS
                     DVLGDALQRCAHYSMINNEGVRVIYRAAENIAVGFEYIGVTRHSDRHQIEFFMTTLIR
                     GCRQLTGRQLRPQRITLTHLRTEVSNELKKYFGCTVVFGGAVDEVTFPKMIERLPISG
                     ADPFLNALLRRYCDEARAVRALKPSALRSSIENAIVPLLPHNKIRATKISSALGISKR
                     TLVRRLTSEGLSFAGILHDLRYDLAKRYLRETGLPISTIAWLLGYEEVSSFTHAFKRW
                     TGKTPKQLRLTGMS"
     gene            6830..7150
                     /locus_tag="VLJ17_04000"
     CDS             6830..7150
                     /locus_tag="VLJ17_04000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22173.1"
                     /translation="MTVEARLVWAHIELQIRPTDLCDVKFMPVARYGLYEVRLVEPPH
                     DAAANTFDFWLELFDHGQKISVDSGGADDLETAVTIAEAFVADAKELNKTRPESDCAR
                     PPRL"
     gene            7676..7960
                     /locus_tag="VLJ17_04005"
     CDS             7676..7960
                     /locus_tag="VLJ17_04005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22174.1"
                     /translation="MTLEARLLQAHIELEVTPKDEHDVKSVPLARYGEYEVRLVESAH
                     GSPANTFDFWLELFDHRRMISVDSGGANDLEGAVAIAETLIAHAKELSKK"
     gene            complement(8125..9195)
                     /gene="flhB"
                     /locus_tag="VLJ17_04010"
     CDS             complement(8125..9195)
                     /gene="flhB"
                     /locus_tag="VLJ17_04010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhB"
                     /protein_id="HSV22175.1"
                     /translation="MAEEADDTEKTEDPSQRRLDEALRYGDVAKSQEVNVWFVTAASA
                     LMLLSFSASAAGDLRSMLRNLLANSHQIPFDGAALAGLLRHLGARAIAAVAIPIFLLT
                     LAAICGNMVQHRLVWSVDALMPKLNRISPMAGMKRLVSKQALANFVKGLLKLALVGSL
                     FAILMWPERRRFEGMVTLDPEGLLPLTRTLALKLFGAVVAILAIIAAADYLFQYRQWF
                     ERQKMSLREVRDEYKQNDGDPKIKAKIRQLRASRARKRMMAAVPKATVVITNPTHFAV
                     ALQYEHGMSAPVCVAKGVDLIALNIREVARAHNVAVVENPPLARTLYTAVEIDEEIPA
                     EHYKAVAEVIGYVMRLNGALSG"
     gene            complement(9205..10005)
                     /gene="fliR"
                     /locus_tag="VLJ17_04015"
     CDS             complement(9205..10005)
                     /gene="fliR"
                     /locus_tag="VLJ17_04015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008133452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0044780 - bacterial-type flagellum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliR"
                     /protein_id="HSV22176.1"
                     /translation="MTIDISFLPGLAAAYLLIFARIGAMLMLLPGLGELSIPPRMRLS
                     AALVLAILIMPLHRSAYRVDLTMLAPVLTMLGEELLIGALLGMTARLTIGTLQVTGSI
                     VAQQLGLGFVTAVDPTQGQQGVIIGNFLTLTGITLVFATDLHYLAISALEDSYMLFAP
                     GAVPLTGDMAAHITSTVGGAFRIGVQLSAPFLAFGLLFNLGLGILSRLMPQMQVFFVG
                     MPLSILGGLTLLILVIGAMMVTFLGHLEGVMHALAPSVSQPSLPREGG"
     gene            complement(10185..10448)
                     /gene="fliQ"
                     /locus_tag="VLJ17_04020"
     CDS             complement(10185..10448)
                     /gene="fliQ"
                     /locus_tag="VLJ17_04020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FliQ"
                     /protein_id="HSV22177.1"
                     /translation="MTAPEVLDVARDAIYTLVLVSSPLMLVGLAVGVIISLFQALTQI
                     QETTLVFVPKIMAIFAAMLIALPFMADAMAAHMARVVAHIVSG"
     gene            complement(10530..10805)
                     /gene="fliE"
                     /locus_tag="VLJ17_04025"
     CDS             complement(10530..10805)
                     /gene="fliE"
                     /locus_tag="VLJ17_04025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein FliE"
                     /protein_id="HSV22178.1"
                     /translation="MTDQGGGLARTIGDDVSGHGPNFGSLLKEAIDGVSAAGRKSDTQ
                     VQAMASGKANVVDLVTAVAEAETAISALVAVRDNVIQSYQEIMRMTI"
BASE COUNT         2248 a         3325 c         3161 g         2072 t
ORIGIN      
        1 cgccaaacga gaacaaaatc cccattacag ccgctataac gtccaatggg cagggccggt
       61 ggtcacacgt tgactgttga ccgagcgcct ttccgtgccg ggggggcggg ttacgcctta
      121 ggctaaccca actacaaatt acgctgaccg ccagcgcggc accagcttta gcgcattctc
      181 acgctcgatg ttgcgcagat cgtccggccc gaagatctct gcgagcccct tcacgtgctc
      241 cgcaccggtg cgataggggt aatcggaacc gaacacaatc tgcgatgtcg tgaccatcct
      301 gatcaacgac gccatcgcga tcgggttggc ggcctgcgcg gtatcgtaat agaagcgcgc
      361 gagctccgct atcacgcctt catgcgtgaa ggatttatat ttcgggttca ttgggagctg
      421 cacgctaaac cggtcggtca gcgacgtgac ggttccgccg ccatgagaga agatgaaatt
      481 gacgtcccgg cagcgtgccg acgtcccgga gaagatcagg ctcgcgatgg tgcgggtcgt
      541 gtcggtcccc cattcgatga tggtgggcgg gatgccggcg aggttttggc agcacgccgg
      601 gttgttggga tgcgtgtagg ccgttgcctt gcggcgatga agttcatcca tcacgggcgc
      661 gaagacggca tcgcccagaa acttgtcgcc gtaacttgtc atgaagccca ccccatcagc
      721 cttcagggta tcaagggcat actcgatctc ccgcagcgtc tcgtccacat ggggcatcgg
      781 cagcagcgcg aaggtgccga agcggcccgg atgatccgcc gccagcgtct tcgcgtattc
      841 attggaggcg cgcgccacgg cggcagcttc cgtagagccg agaaatccga tgcccggcgt
      901 ttgggccgac aaaatcgacg tcgcgacgcc ggccttgtcc atgtcgtcga gcgaacgctg
      961 cggcgtccag ctggtgaccg gcggggtctc aagcccagcc ttcttgagcg catcgaccca
     1021 gggcggtggg gagagatggt ggtggacatc gatgcggagc ggctttgcct gcgccagcat
     1081 cttcgccggc atgccggccg aagcggccgc gccgagccca agcgccgcga caccaccggt
     1141 gacgaagttg cgccggctga tcgtcgcgtc atcctctctc acggtagccg aagcaaggcc
     1201 tccgcagcac ccgcacgcgg caaaaaatcg acgtgaaacg cccatcttgc gcatcggcac
     1261 ctccccggct gtcgcggcat cgccgctttg tttgatttgg tgaggacgtt ggcacaaacc
     1321 ggcatgcggt caagacaatt cggaagcccc atacgggtct tcagttcggc gcggcgccgc
     1381 tgtgctggac ggcattgcgg cggtagaggc cgcgcagggt gccggaatcc cactgaatat
     1441 ctgcgatgcg ccaatccttg ccggagcgga gcagttcaag aacaaccttt tccgctttac
     1501 cggaatttgt gaaggttacg atcccagtcg tcttgagcgc accggtatcc ttgacctcaa
     1561 tggacagatc cgagatgtcc cattcctgat gacctacgaa cggatcgcca tcgagcgccg
     1621 gtggctcgcc gcgcgttgcc gccgcggccc ggtcctccaa aatgagagaa gcaagaccga
     1681 ccgtgaaata gctacgcacc aatttagcgt tggtgagctc gaccccggcc gctgttccgg
     1741 acgatttgcc aagatagtgc tgatagatcg aactgaggaa taccttgacg gccgactcgt
     1801 gactggcacg ggccagcgcc ttgccggtca acgccgcagg gacggcaacc acgatcacaa
     1861 ccatgaaacc ggccacgatg tggcgacgcg ataaggcagc acgcccaaca ttgttcatct
     1921 tcttcgaaac tctcattgat cggccgatcc tgctacggcc gtcatggacg tcaatgcggt
     1981 gcggaaaagc gccaagatgg cgatgccaag cctcggctta atgccggtaa tatagccgtt
     2041 ggaaccgcct gcgccaagcg tccaaggcgt cgcagggaga tatggcgggg ccacaacagt
     2101 tgcgtccaaa tcgtcaattc gccggcttga atgcttgaaa tctgcgttgc agtggcagac
     2161 agtttaaaaa tcgatcgtgc tatatggcat tggcaggagc tcatcccatg cgctggatgc
     2221 tatcaattgc tgtgattctc accccttttg ccgctcatgc agtcgtcgtc agggccggcc
     2281 tgaccggaaa tgacaccggc ggcatcattc agtggacgcc ggagaccgac ctcacctacc
     2341 tcgacatcgc gaccgcacat tgcgcccgtt ggaaccggta cgccagcatc actagcgtgc
     2401 accgcatgta cggcgactat atcggcttcc aatgcgtcgt cgatcgccga tatgatccgc
     2461 gcaggggctg ggcccattaa aaattaccaa actaccgaca attacttgcc catcgtttcc
     2521 ttcaccgccc cgacaagttg cttgagggta aaaggcttcg caaggaagtt gtacctgtat
     2581 ttttcaccct ccgggaggtg cttctcgaac gcctcttcgg catagccgga cacgaagatg
     2641 atcttaacat tgggatcgcg gctacgcagt ttggtcagaa gagtcggccc gtccatctcg
     2701 ggcatgacca cgtcggaaac cacgagatca atcttgccga aatagctatc gaacgcctcg
     2761 accgcctcgg agccgtttgc cgcctggagc accgtatagc cgcgcgaggt cagtccgcgc
     2821 gcattgagac cgcgcaaact ctcttcgtct tcgaccagta ggatggtgcc ctgcccggtg
     2881 tcgtctgccg gtttcggcgc cagcttgtca aggcggatag gaacgccttg ttctgccgcg
     2941 gcatccggcg ccgtttcctc agccgtcgga atatggcggg gcagaaagat acggaacgtc
     3001 gtaccccttc caatggttga ctccggatag atgaaaccac cggtctgctt gacgatgcca
     3061 taaactgtcg aaaggccgag gccggttccc ttgccgacct ccttggtgga gaagaacggc
     3121 tcaaagatct gatcgataat gtcgtcggaa atgccggttc cagaatcgct gacctccacc
     3181 aatacatact cgcctggtgg catccccttg agggccggat gccggctttc cgcaccagtg
     3241 acattcgcgg cccgcaacgt cagcttgccg ccttctggca tagcgtcgcg agcattgacc
     3301 gcgagattga cgatcacctg ttcgaactgg gacaggtcag ctttgacagc ccacaggtca
     3361 ctgccggggg ggacgagatc gagcatgatc cgctcaccaa tcaaccggcg cagcagcatc
     3421 gaaagatccg acagcgcctc gccgagatcc agcacctgag ggcgcagcgt ctgccggcgc
     3481 gagaacgcca gcaagtggcg caccaagccg gcagcccgat tagcatcgtg cttgatctgt
     3541 atgatgtcct ggaaggacgg atcggacggc ttgtgtgcgg tgagcagaaa gtcggtcgcc
     3601 atcatgatcg aggaaagcac gttgttgaaa tcatgcgcaa tgccgcccgc gagcttgccg
     3661 gccgactcca tcttctgtgc ctgatcaaac tggcgttgca gcacgcgctg ctcggtggtc
     3721 tctatcgcat agacgatcgc ggcctcggaa tcgcgttcag cctcttcgac cggtgtgaca
     3781 tagaaacgcg cccaccgttc gcccccgtgg gcgagtgcgg cgtcgatggg cgtgatatcg
     3841 ccgcgaccgc tcgcagcctg cgccagcgca tcatcgagtg cagcacgatc gcgctcggcg
     3901 accaccccgc ggatggcgcg ccctagtggc ggcgcagcct cgcccttgag cacgttctga
     3961 aacagatgcg cgaacaatgc attgttgcgg gctatgcggc cattgcgatc gacagtcgcg
     4021 atcgccattg gggtattgtt gaagaagcgc acgaagcgca cttcggcgtc gcgcagcgcg
     4081 tcggtgctgg cgccgccggc gcgattgaga accagcgtgc gcgacgcacc tggggtggca
     4141 tcggccgcaa acgcgacctt gtgataaagc cgcaccggca gggtacggcc gtcacggcga
     4201 cgcagatcga gatcgagaat gtcggtcttg acctcgcccg gatgcgccga cagcgtcgtc
     4261 aacagcgccg cgctgtcgcc cggcaggaga tcagcgagcc ggagcactcc tgagccgacc
     4321 tgggcaagat cgtaatcgag ccagccggcg agcgtggcgt tgatatagcc gatgtcacca
     4381 ttgccatcga ccgagaaaaa gccggccggc gcatgatcga gatagtcaat cgcttgctgt
     4441 aactcctgaa acacgttctc ctgacgctcg cggtcgcggg tcacgtcggc gacagtccac
     4501 accgaggcct tctgggcccc gtcgggagcc cccactgccc cgagggggcg cacccgcagc
     4561 cgaagccatc gcgccggctc cccgtgttgg gcggtgatcc gcacctcctc ttggagtcgc
     4621 ctgccgtctc ggctcgcttt gagcaggcga tagaccgcct cggaggcttc cggatcgccg
     4681 acgaacacgc gctctaccgg gcgaacgtcc ggcattccga ccgcccccga aaacgcccgg
     4741 taggccgcat tggcataaag gacgcgcccg tcggcgtcag tcaccacgat gccttcatgg
     4801 gcgtgttcga ccacctgctc gagcgttgaa ttggacgcct cccggccgga aatccgaagt
     4861 atcccggcgg cgagggcaaa cagcgagaaa accccaatca tgccgagaac ggccaacaga
     4921 aacatcacat aggaaccagc ctgattgtgc ccgaccaaca tcagaccgga ggcagcgacg
     4981 atcagaccgg cggcgaccag caagactaac gcaatgctgc cccggcgttc gttgcggtct
     5041 accattgtgg tgctcaggcc ctgcattgcc atatcggtcc gaacctgcct cgcatcggac
     5101 ggcctccgcg tcgacgggtc ccgcacgtcc cccagtgcac cagccgacca gccggcgcaa
     5161 gaccgcgtcc ggcgccaacc ccccgatgac cttccttaaa tgattctctc cggatgcggg
     5221 accacgcgaa catgccggcg tagccaagcg ccgcaccaag ccagggccac ggggcagggc
     5281 ctcgccggcg gaattcgttg ccgctggcaa cttgacgcgt gcttctatcc gattggccgg
     5341 atcaagcgcc cgaagacggc cgcggtattg gccgaatttc gaagggtcct tgcaatacat
     5401 tgattcggcg ccaaattttg gggcatctcg ctgtgccaaa atcagccgga cgcggggctg
     5461 cgcctgatgc ggtcatgagg atggcgatct gaccgtggcg cccggcaccc gaaagcgcct
     5521 tcgcagaagc cgaccgatca aatcggtcaa ctcattccgg tcaaacgcag ttgtttgggc
     5581 gttttgcccg tccaccgttt gaacgcgtgc gtaaatgagc tgacttcctc gtaacccagc
     5641 aaccatgcga tcgttgaaat aggcagccct gtctctctca agtaccgttt tgccaaatcg
     5701 tatctaaggt catgtaaaat tccggcgaag ctcagtccct ccgacgtcag acgtcgaaca
     5761 agcgttcgct tgcttatacc tagcgcgctg gaaatcttcg ttgctcgtat tttgttgtgc
     5821 ggcaacagtg ggacaatggc attctcgata ctcgatcgca gtgcgctggg cttaagggca
     5881 cggactgctc gagcttcatc gcagtatctg cgcagcagcg cattaagaaa tggatcagca
     5941 ccagatatcg gcaaacgctc gatcatcttc ggaaacgtaa cctcatcaac ggcaccgccg
     6001 aagacgacgg tacagccaaa atacttcttt agctcgttgg atacctcggt tcgaagatgc
     6061 gtgagcgtta tgcgttgcgg ccgcaactgg cggcccgtca attgccgaca gccgcggatt
     6121 aacgttgtca tgaaaaattc gatctgatgt cgatctgaat ggcgcgtcac gccaatatat
     6181 tcgaagccga cagcaatgtt ttccgcggcg cgataaatca cgcgcacgcc ttcgttattt
     6241 atcatgctgt agtgcgcgca cctttgcaaa gcatcgccaa gcacatcaga agaagccatc
     6301 acataatgca gcagcccgat ctcgcgaaga tcaaaagctt gcgcaagatg aaagccgagg
     6361 aattcgtcac caagcgcttt ggcagccaag ttcagaaatt tgatctggct cgccaccttc
     6421 agccgagttt gtgggtcatc aatttggaca cgggtcaaac cggccttgtg aagcaaagcg
     6481 ccagccttta ttcccgcacg ttcacatttc gcataggcga ggcgcgcaat cccgccaacg
     6541 gccgtcggaa gctccgccag cccacttgaa tccgagacat gacggctagt caccttctgc
     6601 tcttttgtcg ttggggctgg cacattcgaa caagtttttg gcgcaaaata tcaagacgac
     6661 cccaaaccct agccgctaga ccagcgcgtt cgcggcaatc ggcgctccaa cccctgaaaa
     6721 tcataccata ccgcggaccg caccgcgaca ggggttggat tgccggtcca cggccgaatg
     6781 ggggacctcg acctccgtcc tgagccggac cagaagggcc attgtggaaa tgactgttga
     6841 agcacgcctt gtatgggctc acatcgagct gcagatcagg ccaacagacc tgtgtgacgt
     6901 gaagttcatg ccggtggcgc gctacggtct ttatgaagtc cgccttgttg agccgccgca
     6961 tgatgctgcc gccaacacgt tcgacttctg gctcgaattg tttgatcacg gccaaaaaat
     7021 ttcggtggac agcggcggcg cggacgatct tgagaccgct gtgacaatag ccgaagcatt
     7081 tgttgcagat gctaaagaac tgaacaaaac acggccggaa tccgattgcg cgcgtccgcc
     7141 gaggctgtga agtctagcag tttgatcccc ccgacagcct tggatccaaa gcaatgtgcg
     7201 acctcattaa tgctctaatg ttgcctggct gttgccacga aataggcatg ctgctatata
     7261 ggcagcgatc tagtcgcttt tgttcgaaaa ccgactgggc gcggagcgca gggttggttt
     7321 gcaaaagact gggtgcccga tgccgccgca gcggcaaacg taaatgcttt tcagcggcgt
     7381 ttgaccgcaa tggacttgat tcgcccaaat gatctgcggc cttcgacggg tcgtccgcct
     7441 tcgggatcgg aaagacccgc ccctctgcga gcggctcgac ggcttatcct tcgatagccg
     7501 gtgggccgac tggcgagggc ctttgcacct tcgcaatcgc tgcagtcgcc gagggcccag
     7561 cgcaactgcg ttcatggtct gctcctccgc tacattcgga cgccgggaac acgcggagat
     7621 accccccctc gatttgcgtt tccggccctt gcagatcggg aaggccgccg tagacatgac
     7681 tcttgaagca cgacttcttc aggctcacat cgagcttgag gttacgccaa aagacgagca
     7741 cgacgtgaag tctgtgccgt tggcgcggta cggtgagtat gaggtcaggc tcgttgaatc
     7801 ggcgcatggc tctcccgcca acacattcga cttttggctt gaattgtttg atcatcgccg
     7861 aatgatttcg gtggatagcg gtggcgcgaa cgatctcgag ggagctgtgg caatagccga
     7921 aacactgatt gcacatgcca aagagctgag caaaaaataa catgatcgat cgtcaaagac
     7981 gcccggtgca atattcctcg gaacagctgc gttagcgctt cctggaactt ttatttcaat
     8041 ggccacctga actgctctcg cacgagcatt ctgctcgatt gcggattcga cttcaacgca
     8101 atctaaccga ccgcgccgcc ccgctcaccc gctcagcgcc ccattgagcc gcattacgta
     8161 accaatcacc tcggcgaccg ccttgtaatg ttccgcaggt atctcctcat cgatttctac
     8221 ggccgtgtag agggtacggg cgagcggcgg attttccacc accgcgacgt tatgcgcgcg
     8281 agcgacttcg cggatgttca aggcgatcaa atcgacgccc ttggcgacgc agacgggcgc
     8341 gctcatgccg tgctcgtatt gcagtgcgac cgcaaagtgc gtcggattgg taatgaccac
     8401 agtcgccttg ggcacagcag ccatcatgcg tttcctcgcc cggctggcgc gcagctgccg
     8461 aatcttggcc ttgattttgg gatcgccatc gttctgctta tactcgtccc tgacctcgcg
     8521 cagcgacatc ttctgccgct caaaccattg acggtattgg aatagatagt cagcggccgc
     8581 gatgatggcg aggatcgcca ccacggcgcc gaaaagcttg agcgcaagcg tgcgggtgag
     8641 cggcagcagc ccttcaggat cgagcgtcac catgccctcg aaacggcgac gctccggcca
     8701 catcaagatg gcgaacagcg agccgacaag ggcgagcttc agtagtcctt tgacgaagtt
     8761 ggccagcgcc tgcttggaga ccaaccgctt catgcccgcc atcggggaaa tgcggttgag
     8821 cttcggcatc agcgcatcaa ccgaccatac cagccggtgc tggaccatgt tgccacagat
     8881 cgccgccagc gtgagcagaa aaatcggtat cgcaaccgcg gcgatcgctc gggcgccgag
     8941 gtggcgcagc agccccgcaa gcgcggcgcc gtcgaagggg atctgatggg aattagccag
     9001 cagattgcgc agcatggacc gcagatcgcc tgccgccgag gcggaaaagc tcagcaacat
     9061 cagggcggac gccgccgtca cgaaccagac attgacctcc tggctcttgg cgacgtcgcc
     9121 ataccgtagc gcctcatcga gtcgcctctg actggggtct tcggtttttt cggtatcgtc
     9181 ggcttcttcg gccatacctc ctccctaacc tccttcgcgc gggagggaag gctgggagac
     9241 agacggcgcc agcgcgtgca tcacgccctc gaggtggccc agaaacgtca ccatcatggc
     9301 cccgatgaca aggatcagca gcgtgaggcc gccgaggatc gacagcggca tgccgacgaa
     9361 gaacacctgc atctgcggca tgaggcgcga caggatgccc aatccgagat tgaagaggag
     9421 cccgaacgcc agaaatggtg ccgacagctg cacgccaatg cggaatgcgc cgccgacggt
     9481 cgacgtgata tgggcagcca tgtcgccggt aagcggcaca gctcccggcg cgaacagcat
     9541 gtagctgtct tcgagcgccg atatcgcgag atagtgtagg tcggtcgcaa ataccagcgt
     9601 tatgcccgtc aaggtgagaa agttgccgat gatgacgcct tgctggccct gggtcggatc
     9661 gaccgcggtg acgaaaccaa ggccgagctg ctgggcgacg atcgatccgg tcacctggag
     9721 cgttccgatc gtcagccgcg ccgtcatgcc taagagcgcg ccgatcagca attcttcgcc
     9781 aagcatggta agcaccggcg ccagcatggt gagatcgacc cgataggcgc tgcggtgcag
     9841 cggcataatc agaatggcga gcacaagcgc cgccgacagg cgcatccgcg gcggaatgct
     9901 gagctcgccg agccccggca acagcatcaa catggcgccg atgcgcgcga atatcaggag
     9961 atacgcggct gcaagccccg gcagaaacga tatgtcgatc gtcaccaccg cggtcccgaa
    10021 cgctcagaga cggagtgaca ttcgcggacc tcattctgag aagtccgcct tctcgggtag
    10081 ccgtctcgaa ggatgagcgc gtgttcgtgc catgcgtcta tccttcgaga gacgctcttg
    10141 cgggcgttcc ccaagatgag gtccgaattg cgtctcacgc gcgctcagcc cgacacgata
    10201 tgggccacaa cccgcgccat atgagccgcc atggcatcgg ccatgaacgg cagggcaatc
    10261 agcatggcgg caaagatggc catgatcttg ggaacgaaca ccagcgttgt ttcctggatc
    10321 tgcgtgagcg cctggaatag cgaaataatc accccaacgg cgagaccgac caacatcagc
    10381 ggactcgaca ccagcaccag cgtgtagata gcgtcgcgtg cgacatcgag aacttcaggc
    10441 gccgtcatca tggtcggtat ttcgcttaaa tctttcgtgg tcttcgctgc gttcttctgc
    10501 ctccccatct ttggtgaggg agaaggggct tagatcgtca tgcgcatgat ttcctgatag
    10561 gattgaataa cgttatcgcg caccgctacc agagcgctaa tcgcagtctc tgcctctgca
    10621 accgcggtga cgagatcgac cacgttggcc tttccgctcg ccatggcctg cacctgagtg
    10681 tcggatttgc gaccggctgc gctcactccg tcgatcgcct ccttgagcaa agagccgaaa
    10741 ttcggtccat gcccgctgac gtcgtcgcca atcgtcctcg cgagcccacc tccttggtca
    10801 gtgatg
//
LOCUS       DATILV010000176         3002 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1063915, whole genome shotgun sequence.
ACCESSION   DATILV010000176 DATILV010000000
VERSION     DATILV010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3002
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1063915"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            555..1001
                     /locus_tag="VLJ17_04030"
     CDS             555..1001
                     /locus_tag="VLJ17_04030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22179.1"
                     /translation="MGAQVDQELLARNEYLAAENRILKAQLQGRLKLSDADRATLGEI
                     GHRLGRAVLAEVATVARPDTILAWYRKLVARKFDGSRARRGPGRPRINREVEQLIVRM
                     AIENRDFCNGPWFVNPSFHLRDYPSARDLASVRGRCDAATLWGSRG"
     gene            complement(1289..2311)
                     /locus_tag="VLJ17_04035"
     CDS             complement(1289..2311)
                     /locus_tag="VLJ17_04035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018261390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HSV22180.1"
                     /translation="MNHYAGIDVSLEQASVCVIDASGKIVREGKVPSEPEALIAWFGA
                     LGIGVTRIGLEAGPLSQWLYAALRGAGLAIELLETRHVRTAFKIMPVKTDRKDAHGIA
                     ELMRLGWFRPVHCKSMEAQETRAILTSRKLVQKMLHETEMSLRGVLRNFGLKVGKVTV
                     ARFEFRIRELVEGHPTLAMIATSLLATRATLRREFNALEKRLRATARHDTRARLLMTT
                     PGVGTIVSLTYVAAIDDPARFNSSKIVGAHFGLTPSRYQSGETDRSGRISRVGDATVR
                     AALYEAAHVILTKPVKGCTALKSWAMRIAKRAGMAKAKVALARKLAVIMHRMLADGTP
                     FTTQPA"
     gene            2463..>3002
                     /locus_tag="VLJ17_04040"
     CDS             2463..>3002
                     /locus_tag="VLJ17_04040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22181.1"
                     /translation="MANLGYEICDQTVGNILERHGLPPAPERNRTTPWLVFIRTHLAL
                     LAGTDFFTAEVLTLRGLVTYYVLFFIHLESRKVDFAGIAIHPNEPWMKQIARNATMEG
                     CGVLRGCRYLLHDRDTKFTCAFRAIIASGQVKPLRLPARSPNLNAFTERWVRSVKEEC
                     LSKVILFGERSLRRALSEYI"
BASE COUNT          561 a          927 c          898 g          616 t
ORIGIN      
        1 ttcttcgcag caacaattgc tcaaatgagg tcgcgggcgg tattgtcgtg gcgacggcga
       61 aagatgtcaa agcccccaaa gaagccaaac ttacctacag ggtcaagtac aagacgttgg
      121 agggtgaccg tcaaatcgct agggtctacc tggtgtcgct ttttccgtaa ccacggcgag
      181 accatgcccc gcgcgtggta gccatcccac tggcatttcg gcgtgttagg tcggtgaacc
      241 ctgattgaaa ggcagcgagt tgtgtgaagt ggagactttc cgtcgcctcg cgttttggtc
      301 gccccgcgac gctaagcgcc acctcgcaac cggccattgc gaaaacccca actatgaaat
      361 tcttcggcag attcgcagcg ccagcccgaa tcaaattagg gagcaggtga aagtcgttag
      421 gtcaaaaaac tcaaacggcc ggtaaaacgg tcagttatcc acggtcagaa tagcggagtc
      481 ggaggtcgtc ctgtacattt tagggtgatc gatggaggcg tcacgggttg gtgtgggcag
      541 gggctcggta tggattgggc gcgcaggtcg accaagagct gctggcgcgt aatgaatatc
      601 tggccgccga aaaccgcatc ctgaaggccc agttgcaagg ccggctgaag ctgtcggacg
      661 cggaccgagc cacgctcggc gagatcggtc atcggctcgg gcgtgcggtt ctcgccgagg
      721 tcgcaaccgt cgcccggccg gacaccatcc ttgcctggta tcgcaagctt gttgcacgca
      781 aattcgatgg ctcgagggct cgtcgaggcc cgggccggcc gcggatcaac cgcgaggtcg
      841 agcagctgat cgttcgtatg gccatcgaga accgggactt ctgtaacggg ccttggtttg
      901 tcaatccctc tttccacttg cgagattatc cttctgcccg ggatcttgct tctgtccgtg
      961 gtcggtgcga tgccgccacc ttatggggtt cgagaggata ggtcggccaa tctgcggtgc
     1021 gcgtggtctt tagccacgac ccggttcgcg gcctgacctg atccatcgtc ccgggcatcg
     1081 ggacctcgct tcgggaaggc tggtgtcatg accaccccga gagcccttcg atctgttctc
     1141 cttctctaaa tctattcctt tgttcgaccg cgactgacat tcctttgtcc cgacctaaga
     1201 ctctcggagc gtcgcgcgca ggcgccgtca aggatggccg aaggccaccg ccgcaggcgg
     1261 cttgtccttg acggcgccga gcacggcgct acgctggttg ggtcgtgaac ggcgtgccat
     1321 cggcgagcat cctatgcatg atgacggcga gtttgcgggc aagcgccacc tttgctttgg
     1381 ccataccggc ccgcttggcg atgcgcatcg cccagctctt gagcgccgtg cagcccttga
     1441 ccggcttggt caggatcaca tgggcggcct cataaagcgc ggcgcgcacc gtggcgtccc
     1501 caacccttga gatgcggccg gagcggtcgg tttcgcccga ttgatagcgg ctcggcgtca
     1561 ggccgaaatg cgccccgacg atcttggagg agttaaaccg ggcaggatcg tcaatcgccg
     1621 ccacataggt gagcgagacg atggtgccga cgccaggtgt cgtcatcaac agccgtgcgc
     1681 gcgtatcgtg gcgtgcggtg gcgcgcaatc gcttttccaa ggcattgaac tcgcgtcgca
     1741 acgtcgcacg tgtcgccaac agtgaggtcg ctatcatcgc caaggttgga tgaccttcga
     1801 caagctcgcg aatgcggaac tcgaaccgcg ccaccgtgac cttgccgacc ttgagcccaa
     1861 aattgcgtag cacgccgcgc aggctcatct cggtctcgtg aagcatcttc tgcaccagct
     1921 tgcgcgatgt cagaatggca cgcgtctcct gcgcctccat cgacttgcag tgcaccggac
     1981 ggaaccagcc cagccgcatc agctctgcga tgccgtgggc atccttgcgg tccgtcttca
     2041 ccggcatgat cttgaacgcc gtgcgcacat gccgcgtctc caacagctcg attgcaagtc
     2101 ccgcaccgcg cagcgccgca taaagccatt gcgatagcgg ccccgcttca agcccgatcc
     2161 gcgtcacacc gatccccagc gctccgaacc aggcaatcaa tgcctccggc tcgctcggca
     2221 ccttcccttc ccggacaatc ttgccgcttg cgtcgatgac gcacacgcta gcctgttcca
     2281 aagacacgtc gattcctgca taatggttca tggtcgtccc tcgatgatgc ttggagcagg
     2341 caatccctga ctccgttgtt ttgacaccat caatttgagg gacgacttcc aaaccgccaa
     2401 gccgccgcct accgcaaagt gcccgttacc ccatctgggg ctatgaccgg atagtaggcg
     2461 ccttggccaa cctcgggtat gagatttgcg atcaaacagt tggcaatatc ctggagcgtc
     2521 acggtctgcc gcccgcgccg gagcgcaacc gcacgacccc atggctggtt ttcattcgga
     2581 cccatctggc gctgttggcg gggaccgact tcttcaccgc ggaggtgctg accctgcgcg
     2641 ggctggtgac gtactacgtg ctgtttttca ttcatcttga gagccgcaag gtcgacttcg
     2701 ccgggatcgc catccacccg aacgagccgt ggatgaaaca aatcgcgcgg aacgccacga
     2761 tggagggatg tggcgtcctt cgcggctgtc gctatctcct gcatgatcgg gacaccaagt
     2821 tcacctgcgc gttccgagcg atcattgcct cgggtcaagt caagccgctc cgcttgcctg
     2881 cgcgaagtcc gaacttgaac gcgtttacgg agcgctgggt gaggtcagtg aaagaggagt
     2941 gcctgtcgaa ggtgatcctc tttggcgagc gctccttgcg gcgggcgctg agcgaatata
     3001 tc
//
LOCUS       DATILV010000177         2981 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1830736, whole genome shotgun sequence.
ACCESSION   DATILV010000177 DATILV010000000
VERSION     DATILV010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2981)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2981)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2981
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1830736"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(346..477)
                     /locus_tag="VLJ17_04045"
     CDS             complement(346..477)
                     /locus_tag="VLJ17_04045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22182.1"
                     /translation="MDVVEDVSVAVLFVIDGVICTGVEVDEINGGAFSMYEPDGWTA"
     gene            583..879
                     /locus_tag="VLJ17_04050"
     CDS             583..879
                     /locus_tag="VLJ17_04050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22183.1"
                     /translation="MNPDQLAELKSNEVVRKRLAKLMARDCLRNSTKLENMHAADQID
                     DEEMQDLMIDAVDHCYDFLMELCSPQGAEIIEDLKQRDKVPNWNDPRPMIFRHL"
     gene            complement(1990..2169)
                     /locus_tag="VLJ17_04055"
     CDS             complement(1990..2169)
                     /locus_tag="VLJ17_04055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22184.1"
                     /translation="MEKPIVDGSGTIGIDDTVWRITGADIPAGSRVRVARDDGTALHL
                     ELVRDHERVAARGGK"
BASE COUNT          629 a          929 c          844 g          579 t
ORIGIN      
        1 tcggtcttgc aaagaccggc cgctctgcga agcgcgcgaa gacgaaatcg cgcactctat
       61 gcgtagaccg ctggcgaaca cgctggtccg ttctttccgc gcgcggctca tcgctacata
      121 gagagggcag caatccctca ccatcgctca gactgacgcg ctgagacatc ttagccggcg
      181 gtatgcctga tcccggcccg gcctgagctt cgatctgaaa ggcctccgct ctatgcctgc
      241 tccgggtcat aagcgggagc gccgaccacg tcggtggcct gcctgggtcc acacaagcgg
      301 cggatatttg tactacacgc cgagcggcga gcttaaggtt ggcgattatg ccgtccagcc
      361 gtccggctcg tacatcgaga acgctccccc atttatttcg tccacctcga caccggtgca
      421 gatcacgccg tcaataacga acagcaccgc gacggatacg tcctcaacca catccactgt
      481 tgcatcccct tccgcacccg acgcgtccac atctaccgcc cggtccccag cggacaattc
      541 tccgagcacg acgacgagct ccgaaccgat gccgcctact ctatgaaccc cgaccagtta
      601 gcggaactga agagcaatga agtcgtccgg aagcgccttg ctaagctgat ggcccgcgac
      661 tgccttcgga atagtacgaa actggaaaac atgcacgcag cggatcaaat cgacgatgag
      721 gaaatgcaag acctcatgat cgacgcggtg gatcactgct acgacttcct catggaactg
      781 tgcagcccac agggcgcgga gatcattgaa gacctcaagc agcgcgacaa ggtgccgaac
      841 tggaacgatc caaggccgat gatattcaga catctgtgac tgccgttctc atggcagcgg
      901 agttttccgt tcgctggggc gctcttcatt gtttgccgga gattgccgtc gacaagatcg
      961 agcgcggcgc gcgaaagagg ccttcagcgc cgccgtcgcg tgctgcagcc gcggcgacgg
     1021 cgcggattgg ctcgcattac caaacggaca gcgcgcttgc gcgacccccg actacacgtc
     1081 ctgtgcgaac cgtggttgcc tgatcaacag aatacgggac ctcgtgcatt gcggatacct
     1141 gcattcgaac ctgaccgtgt tgacgccgga ttcgtccgct tcgatgggga caagccgcat
     1201 cgaggacccg cacgaattac agataaccga gccgtattga ttgaacgtcg ttgctctcca
     1261 tgcgtgcccc cgggccggcc catcggttcc agaagcggct ggcgcgtatg tgcaagattg
     1321 ctcaatgacc ggagttatcc ccgctaatcc ctgcgccgcg acaaaggaaa agcggcaacc
     1381 acggcggcgg ccccacggtc tgcgggcacc tgggacgtga cgtcggactg gtttccaaag
     1441 ctcttggtgc gcgttacgct gtacaattca cgtctctcgc acgcaaactg ctgctgggaa
     1501 caaacgacac tgctattggt tgagctgaga ggcacttgga gattttcaat gtggctgcaa
     1561 acatcggtct ttaagaaatt gtggtctgcc attatcgggt cacgttcctc gcggcctgga
     1621 gtcatcgttc acgatccggc ttcgtcgaaa cctcacgacc tcgacgaccc gttcttcgac
     1681 aggaaagtac aggaacgggt aggccaagca attgcgaacg ccgctcagaa aaatcatccg
     1741 agggcatgag tgaactgctc gataagctcc gaaccgattc cgcctactct atgaacaccg
     1801 accaattagc ggagctgaag gcggatcagc gacggcaccc ttacaatacc ggcgtatatg
     1861 catgaagcgc ttggcgagca attcgcgagt ggtacttgtc aatgcgccgg tcgcgagcgg
     1921 actttgcggt tgcgtaagaa atgcccaagc gccgtcgaag gcatcgcagg cctttgacca
     1981 acttatggcc tatttgcccc cccttgcggc aacccgctca tggtccctga ccagctccag
     2041 atggagcgcc gttccgtcgt cccgcgcaac cctgacgcgg ctgccggccg ggatgtcggc
     2101 cccggtgatc cgccatacgg tatcgtcgat accgattgtg ccggagccgt ccacgatcgg
     2161 cttctccaac gtaaagtacg gccgatgaat gcttcggcgc gacgattgag aaagggctga
     2221 tcggtctgcg ccccaacctc catggcgaca cgctgccaca gcgggaccgc cgccacggaa
     2281 aataccgcga agacgatgaa ttgcgcctgc caggcccagt cgacgtacag cgattttctt
     2341 gggcggtact tggtcggctt gtgaccgatg ttgtcgaaaa aatcatcgca aagaagctgt
     2401 aaaataggaa tgcgcaagtt tcgcatctgt ggctgatctt gaattaatat tgctcgcagg
     2461 tgctcgcaaa atctttttcg acagtatcga ccgtcaaccg acatgccgct cttttggatg
     2521 acgttcgcga actggcgtta gttcacgaag ttcattttcg cccaaggcgg cgcctccgaa
     2581 tatccgccgc ttctgacggg agctatcctg cgtcgcgaaa tcggccggcg agatgccgct
     2641 acggccaaat ctcttgcggt aggtccctgg cgtcgacccc actgacttgc gaaaaacgcg
     2701 ggcaaatgag gccacatcct cgtagccggg ggattgggca atctgcttct gcgaggtgtc
     2761 cccgccctcc aggagctcgc gcgcgcgggc aacgcgaaca gcccgacaat actcgatcgg
     2821 ggtcatgcct gttgcaggtg gcgaaccgcc gcaacagcgt gcgccggtcc agtcccgcaa
     2881 ccgccgccat ggtggcaaga gaaacgcgtc gtccgtcccg catgtggacc cactcctgcg
     2941 ccttcagcac ggctctatct cggtgcgtct gcggaggcgc a
//
LOCUS       DATILV010000178         2518 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1575847, whole genome shotgun sequence.
ACCESSION   DATILV010000178 DATILV010000000
VERSION     DATILV010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2518
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1575847"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            64..327
                     /locus_tag="VLJ17_04060"
                     /pseudo
     CDS             64..327
                     /locus_tag="VLJ17_04060"
                     /inference="COORDINATES: protein motif:HMM:NF019845.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
     gene            349..957
                     /locus_tag="VLJ17_04065"
     CDS             349..957
                     /locus_tag="VLJ17_04065"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HSV22185.1"
                     /translation="MPDGLSDAEAAPLLCAGITTYNALRHSGAVPGDLVAVLGIGGLG
                     HLGIQFANKFGYKVAAIGRGAESAALAKKLGASVYIDNKVTNVAEELQKLGGAQVVLA
                     TAPSSKAMSEVINGLGPNGKLMVVGAAFDPIEVTPVQLITGSRSLQGWASGTPADAED
                     ALNFAELTGVRPMIETYPLEKAAEAYARMMSGHAQFRVVLTM"
     gene            1132..2025
                     /locus_tag="VLJ17_04070"
     CDS             1132..2025
                     /locus_tag="VLJ17_04070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010684037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV22186.1"
                     /translation="MKYPTLYRTVQIDGLAIFYREAGPKDAPTLLLLHGLPSSSRMFE
                     PLFARLSDRYHLVAPDYPGFGHSDWPDPKKFAYTFDHIAEITNHLTEALGLSHYTLYM
                     QDYGGPVGFRMALAHPDRIKALIVQDAIAHNEGLGANWKTRRAFWADRAANESALRTN
                     LLSLPTTRTRHVGNDPNVERYDPDLWTDEFYFLNQPGQADIQSDLFSDYRTNVENYPK
                     WQAWMRKKQPRLLVIWGKYDLSFDLSEPEAYRHDVPNAQVHVLDAGHFALDTAADEIA
                     ALVRSFATSAGAAWGTPAADH"
     gene            2132..>2518
                     /locus_tag="VLJ17_04075"
     CDS             2132..>2518
                     /locus_tag="VLJ17_04075"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family membrane protein"
                     /protein_id="HSV22187.1"
                     /translation="MAKFSSVFLRLAPGISFLSAVADRFGIWDAYGQPNVSWGDYARF
                     VTYTAKLNWFLPAAMISTLAMIATAAETIFGLLLVLGWKTRIAALLSGLLLITFALTM
                     TLALGVKAPRNLSVFSAAGGHCSWGRV"
BASE COUNT          511 a          771 c          735 g          501 t
ORIGIN      
        1 cgccctggag cggcgaaacc ggccgaattg atcgcgagat gatgaagcga cacctgtggt
       61 gtctgccaca gtgacatgtt cacgaaagaa ggcgcttggc caggaattca gtatccccgt
      121 gttccgggac acgaagtcgc gggcatcatc gatgaactcg gtgccggtgt ttccggctgg
      181 aagaagggcc agcgcgttgg catcggctgg cacggcggcc atgacggtac gtgtcgctca
      241 tgccgccgcg gagattttgg caattgccag aacctgaaaa tcgcgggcat cagctacgac
      301 ggcggatacc agcaatacat ggtggcgccc gtggaggcgg cgacggcaat gcccgacggc
      361 ctaagtgacg ccgaggcagc gccgctcctc tgcgccggaa ttaccaccta caacgcgttg
      421 cgccacagtg gcgcggtgcc cggcgatctt gttgccgtgc tgggcatcgg cggtctgggt
      481 cacctcggaa ttcaattcgc caacaagttt ggttataagg tcgcggccat cggacgcggg
      541 gccgaaagcg cggcgctcgc aaagaaactc ggggcgagcg tgtacatcga taacaaagtg
      601 acaaatgtag cagaggaatt gcaaaaactc ggcggcgcac aggtcgttct agccaccgcg
      661 ccaagctcga aagcgatgtc cgaagtaatc aacggtctgg gcccgaacgg caagctcatg
      721 gtagtgggtg cggcatttga tcccattgag gtcacgccgg tacagctcat taccggaagt
      781 cgcagtctgc aaggctgggc ctccggaacg ccagctgacg ccgaggacgc attaaacttc
      841 gccgaactaa ccggtgtgcg tcccatgatt gagacctatc cgctcgaaaa agcggccgag
      901 gcttacgcgc gcatgatgag cggccacgcg cagttccgcg tcgtcctgac gatgtgaaat
      961 cgacgtcact ccaaaacacg gcaaacgacc gctgcacagg tgctgcatga tgcgtcgttt
     1021 cagctcgccc cattggtccg gatgcttgca ggtctgccgc atggccgtgc tgtgctccgc
     1081 gatgctcgga tcaattcaat tgccagccca agcccaagaa aaggaacgcc catgaagtac
     1141 cccactcttt atcgcaccgt acagatcgat gggctcgcca tcttttacag agaggccggc
     1201 ccgaaagacg cgccgacgct tctcctgctg cacggactgc cctcttcgtc acgaatgttc
     1261 gagccgctgt tcgcccggct ttccgaccgc tatcaccttg tcgcgcccga ttaccccggc
     1321 ttcgggcaca gcgactggcc ggatccgaaa aaattcgcgt acacgttcga tcacatcgcc
     1381 gagatcacca atcacctcac cgaggcgctc ggcctctccc actacaccct ttacatgcag
     1441 gattatggcg gccccgtggg ttttcgcatg gccttggctc atcccgaccg catcaaggct
     1501 ctcattgtcc aggacgctat cgcgcacaat gaaggtctcg gagcgaattg gaagacgcga
     1561 cgcgcctttt gggccgatcg cgccgccaac gaaagcgcgc tgcgcacaaa tctgctgtcg
     1621 ctgccgacca cgcgcacgcg ccatgtcggc aacgatccca acgtcgaacg ctatgacccg
     1681 gatctctgga ccgatgaatt ttattttctc aaccagcccg gccaggccga cattcaaagc
     1741 gacctcttct ccgactaccg cacgaacgtg gagaattacc ctaagtggca ggcctggatg
     1801 cgcaaaaagc agccgcgcct gctggtgatc tggggcaagt atgacctctc gttcgatctc
     1861 tcggagccgg aggcctatcg ccacgatgtg ccgaacgctc aggttcacgt tctcgacgcc
     1921 ggtcatttcg cattagacac ggcggcggat gaaatcgccg cactggtccg aagctttgcc
     1981 acgtcggctg gggccgcttg gggaacgcca gccgcggacc attaaaattg cgcgatcacc
     2041 gcgcacatta gaaagccggc tcggtactgc cggaccggga ctggaatcga acctggacca
     2101 aggaacgacg atgagcccac gatcgacggc attggcgaag ttcagctcgg tcttcctacg
     2161 gctcgcaccg ggaatctctt tcctgtctgc cgttgcggac cgctttggca tctgggacgc
     2221 ctatggacag cccaatgtgt cgtggggcga ttacgcccgg ttcgtgacct acacagccaa
     2281 gctcaattgg tttttgccgg cggcaatgat ttcgacgtta gcgatgattg ccacggctgc
     2341 tgaaactatc ttcgggcttc tccttgttct cggttggaaa actcgcatcg ctgctttgct
     2401 aagcggactt cttctgatca cttttgcact gacgatgacc ttggctttgg gtgtgaaggc
     2461 gcctcgcaat ctctcggttt tttcggccgc cggggggcac tgctcctggg ggcgtgtg
//
LOCUS       DATILV010000179         3008 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3109705, whole genome shotgun sequence.
ACCESSION   DATILV010000179 DATILV010000000
VERSION     DATILV010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3008
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3109705"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            467..679
                     /locus_tag="VLJ17_04080"
     CDS             467..679
                     /locus_tag="VLJ17_04080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22188.1"
                     /translation="MLKADGIDLSTNYGDKWPGDPAYAPVFDELNRRKAVVYFHPTGP
                     NCCRDLIPNVPYVLTELTARHHPRDH"
     gene            complement(933..1178)
                     /locus_tag="VLJ17_04085"
     CDS             complement(933..1178)
                     /locus_tag="VLJ17_04085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002964913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HSV22189.1"
                     /translation="MNFLWFLIVGLVAGWLAGTLVKGGGFGFVGDLVVGVVGAFLGGF
                     LFSTLGVSTGGGLIGSIIVATIGAVVLLFLIRLIKRA"
     gene            complement(1541..2611)
                     /locus_tag="VLJ17_04090"
     CDS             complement(1541..2611)
                     /locus_tag="VLJ17_04090"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012336119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase family protein"
                     /protein_id="HSV22190.1"
                     /translation="MSIRNRTSEFCDRFGLRVPLLLAPMAGASAPALSIAVANAGGLG
                     ACGALLMARSEIVAWADEVRTASNGRFQVNLWIPDPSPVRNAAHEKLVREFLAKWGPV
                     VAEDAGDARPPDFTAQCEALLEARPPIVSSVMGLYPSEFVNRLRSLGIAWFANTSTVA
                     ESRAAEAAGAEVVVVQGMEAGGHRGCFDSNNAERELVGLASLVPAVVDAVRIPVVATG
                     GIADGRGVAAALALGASAAQVGTGFLRAPEAGIHPAWAEALARAAPEDTVVSRAFSGR
                     AGRSLSTDYVRAAISDDAPQPAPYSVQRGLTAAMRVAAVKAGDVSRMQAWAGQSAGLA
                     RAEPARKILERLWDDALAILRY"
BASE COUNT          619 a          953 c          881 g          555 t
ORIGIN      
        1 gttccagacg agagtttcac catagcgggg ctcggtgtca gcgcattcgt gccggggcat
       61 cattgatcgc gcagacatcc gcgtccacca cgcagtcgcg tctgatcgat ctgcaccacc
      121 acatcctgcc cccggtgtac ttgtccgaag tgcgggaaat gctaatcgcc tcctggaagc
      181 tctcgtcgcg acaggagagc tatttgccgg cgagggtgct ggaatggtca ccgaaaaatt
      241 ctcttgccga gatagatcgg aacggtgtgg cgaccagcat cgtctcgatt tcggccccgg
      301 gcatttggtt cggcagtgtg ccagcgtcgc gcaatctggc tcacgagatc aacgattacg
      361 cggcgcagct cgtcaaggac taccctggcc ggttcggttt cttcgccaca gcgcctctgc
      421 ccgacaccga aggcagcttg cgggagatcg aatacacgct ctcgatgtgc tcaaggccga
      481 tggcatcgac ttgtcgacga actatggtga taaatggccc ggcgatcccg cctacgcccc
      541 ggtgttcgac gaactcaatc gtcgcaaggc cgtcgtgtat ttccatccga ccggaccgaa
      601 ttgctgtcgc gacctaatcc ccaacgttcc ctacgtgctc acggagttga ccgcacgaca
      661 ccacccgcgc gatcactagc ggccgaactt cgggtgattg ggcgcgataa cgcaatagca
      721 gtcctgccgc gcctcaaggc gtaagcgcac ggctcggtct gggcatcacg aggctatggt
      781 ctgtttgcgt gccaaggcta cccaggcggc tctggcgcga gccgccggag gatcagcgaa
      841 taacgtgata gcgggggccc gctttgatga cccgtcgagg tgcaccgcga tgtccggcgc
      901 aaattaaaat cgcggaaggt gatctcgatt gactacgctc gcttgatcag acggatcagg
      961 aacaacaaga ccacggcccc tatggtcgcg acaatgatgc tgccgatcag cccaccaccg
     1021 gtagagacgc ccagggtgct gaacaggaag ccgccgagaa aggcgcctac gacgccgacg
     1081 accaagtcgc cgacgaagcc gaagccgccg cctttaacca acgtgccagc cagccagccc
     1141 gctaccaacc caactatcaa aaaccacaga aagttcatgt gtcatctcca gcaagtctcg
     1201 aaagtaacgc agacgccgcg ggcatgccgt cccgcgacca gccaccatac ccgctcggct
     1261 gcaaacaatg tcacccttcg ttgctgcgcc gccgaatgcc ttgcctgccg atgaagcatg
     1321 aactaggacg caagctcagg cgcacaggtt gattcgccgg cacgttgtgc ccgcgcgcga
     1381 gcacagcggc gaggaagcga tctaaggcgg ctcgcaagaa gtctgcactt ggtccgtaag
     1441 gcgacggtca cgaacgtttg ctgtccggcg gcgataccgc ctgcagggtt cggcttagga
     1501 actgcggaaa ttcgatcgtc ccaaatctgt ccccggtacg tcagtaacgg agaatcgcga
     1561 gtgcgtcgtc ccaaaggcgc tctaagattt ttcgggccgg ctccgcgcgc gcgaggcctg
     1621 cggattgtcc tgcccacgcc tgcatgcgac tcacgtctcc cgctttcact gcggcgactc
     1681 tcatcgcagc ggtgagaccg cgctgaaccg aatagggtgc aggttgcggt gcatcgtcgg
     1741 aaatggcggc acgtacgtaa tcggttgaca gactgcggcc ggcgcgcccg ctgaaagccc
     1801 tgctaacgac ggtgtcttcc ggcgccgccc tcgcgagcgc ctccgcccat gccggatgaa
     1861 tgcccgcttc cggtgcgcgc aggaatcctg tgccgacctg cgctgcactc gcgcccaatg
     1921 caagcgctgc ggcgacacct cggccgtcgg caatgcctcc ggtagcgacg accggaatcc
     1981 taacagcgtc gacgactgcc ggaacaaggg aagccaatcc caccagttcg cgctcggcat
     2041 tattggaatc aaagcagccg cggtggccgc cggcctccat tccttgaacc acaaccactt
     2101 ctgcgccagc cgcctctgcg gcccttgatt cagcgacggt cgacgtattg gcgaaccacg
     2161 cgatgccaag ggacctaagc cgattcacga attcggatgg gtaaagtccc attaccgaag
     2221 agactatcgg tgggcgggcc tcgagcagcg cctcgcattg cgcggtgaag tctggtggcc
     2281 tggcatcacc cgcgtcttct gcgaccaccg gcccccactt cgcaagaaat tcgcgcacga
     2341 gcttttcgtg ggccgcattg cggactgggg aagggtcggg aatccagaga ttgacttgaa
     2401 atctgccgtt gctcgcggtt cgcacctcat cggcccaggc aacaatttcg gaacgcgcca
     2461 ttaagagcgc gccacaggcg cccaggccac ctgcgtttgc aacggcaatt gatagagcag
     2521 gagcgcttgc accggccatg ggagccaaaa gcagcggtac gcgcagacca aatctgtcgc
     2581 aaaattcgct tgtacgattg cgaatgctca tggcgcggcc caatggttcc tccaattgcc
     2641 gttgcggaga aatatcaaag ctatcatctt tcttcgatct cgaatgtctg cttcacggcg
     2701 gagattttac tgggtcgact gcctactctt ggccggccag cgaccgtcag acgaactcat
     2761 tgggacagac gggtcgcccc aactggcgga tcggcggaag gtcgctagtt gacccgcagc
     2821 ggtccgttgc gaccgaccgc tctcgggaag ccagactcga ggatgaaact tcgccggccc
     2881 gctactcagg cagattcatc ttgcggagga acgtcttata gcgcggatcg ctgaccagat
     2941 tgccaaacag tgggtcgcct ttgataagcc aaagatagat gtccttctgg gcgtaggctc
     3001 tgtccagc
//
LOCUS       DATILV010000180         9315 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2087848, whole genome shotgun sequence.
ACCESSION   DATILV010000180 DATILV010000000
VERSION     DATILV010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9315)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9315)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9315
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2087848"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..489)
                     /locus_tag="VLJ17_04095"
     CDS             complement(<1..489)
                     /locus_tag="VLJ17_04095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007565222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV22191.1"
                     /translation="MPSSSPVPQPATAPRQDFIRDFVAAADAPVAAIPLTTWERLYNS
                     TVARKSFIVVMLAIAWQAYADWLDNVLLFPTLNATFAALWNGFASGELVARSAVSISV
                     LLIGYGAGVVLAFGFTILAMTSRIGNDLLETLTAMFNPLPAIALLPLALLWFGLGNNS
                     IIF"
     gene            complement(476..1309)
                     /locus_tag="VLJ17_04100"
     CDS             complement(476..1309)
                     /locus_tag="VLJ17_04100"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV22192.1"
                     /translation="METEPPMPYATGPNLPAPLLRVRGVTIQYKTPQTLLTAVYRIDF
                     DIMRSDRYVVLGPSGCGKSTLLKAVGGYIRPIEGCITLSGREISRPGPDRVMVFQEFD
                     QLLPWKTVKQNVTFALRISGTLTGRAADEKALACIEKVGLARFADVYPHMLSGGMKAR
                     VAIARGLAMEPDILLMDEPFAALDALSRRQMQDELLALWDDTRFTVLFVTHSISEAVL
                     IGNRILLLSAHPGRVKAELGSNGRDDIHPLTGAKLSDSIHRLLFERGCDTSEEARRAL
                     V"
     gene            1405..2262
                     /locus_tag="VLJ17_04105"
     CDS             1405..2262
                     /locus_tag="VLJ17_04105"
                     /inference="COORDINATES: protein motif:HMM:NF025091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HSV22193.1"
                     /translation="MRATTKFKSMLGGAIVVAPGAFDGLSARLVEQAGFAAVYASGGA
                     IARSTGVPDIGLITPDEIVQRLAEMVEAVGVPVIADADTGYGNALTAQRAARAFERAG
                     VAALHLEDQTFPKKCGHYDDKALVPTSEMVQRLHAVRDALHDPDFIVIGRTDAIAVEG
                     YAAALDRASAYLQAGADMIFVEAPTSEEQIADIARRLPGYKLINMFHGGKTPLLPASR
                     LQDFGYHVVIIPSDTQRAAIKAMQRVLATIGRDGSAAAMIDDMASFKDREAVVDTAGF
                     LARDRRYSA"
     gene            2259..3665
                     /locus_tag="VLJ17_04110"
     CDS             2259..3665
                     /locus_tag="VLJ17_04110"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HSV22194.1"
                     /translation="MSHGSGGGNPYTTGIAAFVAGLTYERIPGDVIARIKLLILDSLG
                     CALYGTALPWSRILMTTLGGLDQTTACTVWGTDRCLSAPHAALVNGTLVQSFELDDVH
                     RAGVLHVGAVTLPSLMAVAELRSGVSGRDFLRAAVAGYEIGPRVGLCMGPEHIGQGWH
                     SGATVGVFAAAAGAAAGLRLPIDQTVHALGIAGTQAAGLMAAQYGAMVKRMHAGRAAQ
                     SGLYGALLAEAGFTGIVDVFESPYGGFCSTFSRSSDRFNLAELTAGLGERFETLGVAL
                     KFYSCVGSNHTTLDAIRTISARRRFRAEEVARILVHGSQATVDHVGWPYKPQGLTSAQ
                     MNLPFCIATLLAEGDVFVDQFSDAAVTDPRRMGLAAKVEVVHDPAITSRGAKLRHMVR
                     VEMHFTDGTLESETVEAPRGSEQKFASEADVVEKFRKLARHTCGDAQAERIVELVLGC
                     DKLADIGALVSALMKKKP"
     gene            complement(3942..5054)
                     /locus_tag="VLJ17_04115"
     CDS             complement(3942..5054)
                     /locus_tag="VLJ17_04115"
                     /inference="COORDINATES: protein motif:HMM:TIGR02276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22195.1"
                     /translation="MKALPHLKFAIPVLAVALAPVPASANMVRIYITNSAGDSIHVVD
                     PATNKVVQEIKGIEGAHGVNFSPDGARVYVSNEETSSLDVFDRKSGKLIKKVPLSDRP
                     NNIAVTKNGDRIAVAVARGKGGLDIVDAATLTLKKTISTNGGRLHNVYITPDSKYVIG
                     GSIPAKKLYVFDLATEDLAWDLQMDLGVRPMAIEANPDGSTKRIFIQMSNLNGFSVVD
                     FAERKELTKVPLPEPPQQFDHGGYRTNEPSHGIGVAPDNKTLWVTSIPNNAVYVYALD
                     TLKQIGSVELPSIKVAGNPMPISAVANWTTFTPDGKYLYVSNAGQRSVSVIDVAGMKF
                     VKAITVGEVPKRINTMVIPDGGHAATGKPGKRASLR"
     gene            5296..7407
                     /gene="ligA"
                     /locus_tag="VLJ17_04120"
     CDS             5296..7407
                     /gene="ligA"
                     /locus_tag="VLJ17_04120"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016846443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HSV22196.1"
                     /translation="MPSKNFSAIAPDALNETQAKAELKRLAAEITAHDKRYYQEDAPT
                     VSDAEYDALRQRNAAIEARFRDLVRPDSPSRRVGAAPAAKFAKVRHAVPMLSLDNAFA
                     EQDVVDFASRIRRFLRLGEGDKIAFSAEPKIDGLSMSLRYENGKLVVGATRGDGNEGE
                     DVTANVKTLKDIPHRLKARGVPQVCEVRGEIYMTKAAFLALNKRQSDIGGQVFANPRN
                     SAAGSLRQKDPSITASRPLAFFAYAWGDMSEMPADTQSGMINWFASCGFKTNPLARMC
                     QSVEALLEFHREIEVQRAVLDYDIDGVVYKVDRLDWQERLGFVSRNPRWAIAHKFPAE
                     KATTVVKDIEIQVGRTGALTPVAKLEPVTVGGVVVQNATLHNADEIKRLDIRVGDTVT
                     IQRAGDVIPQVLGVVEDLPRGATPYQFPTHCPCHLHTEVIRERTATGEEGAVARCSGE
                     FACPYQTVEHLKHFVSRRAFDIEGLGEKQIELFYEQKWIQEPADIFTLEARNEEMRLQ
                     EVEGFGETSVRNLFGAIAARREISLERFIYALGIRHVGETTAVALARGYGTWEAFHEA
                     CLKLARGDEETKEEMDALDQIGDTVIESLRDYFGEPHNVKRIERLVEQVRIRDAEKPR
                     SDSPVAGKTVVFTGSLEKMTRDEAKAMAERLGAKVAGSVSKKTDYVVAGPGAGSKLDK
                     AREAGVNVLTEDEWLALVGER"
     gene            complement(7528..8625)
                     /locus_tag="VLJ17_04125"
     CDS             complement(7528..8625)
                     /locus_tag="VLJ17_04125"
                     /inference="COORDINATES: protein motif:HMM:NF039236.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HSV22197.1"
                     /translation="MTRATGLETQLIENKKKMASGTYLRNAWYVAAWSDDLQEGQLLS
                     RTILKEPVVLYRQADGHVAALQDRCPHRFAPLHMGKVVHGDRVQCPYHGLEFDATGAC
                     AFNPHGQHIPSRLRVRSYPVTEKHKAIWIWMGERAADLSKVPDFSVLDYVPEAHATKR
                     DRITIRANYELIIDNLLDLSHTCFLHEGILGNADTVDAEISVEQEGDDIIVGRHAANA
                     TAPGLFAILMPSLPERVDKFTRLRWMAPSTMRLLTGICLPGAVYESGTGYHAIHMLTP
                     ESDRTTHYFFTAVRFNVLTMDDELNAQIQEKISATRRFAFEEQDAPVIEAQQEMIDNA
                     ETSVDPVILSIDVGPVQYKRILQKMIASEQP"
     gene            8830..>9315
                     /locus_tag="VLJ17_04130"
     CDS             8830..>9315
                     /locus_tag="VLJ17_04130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22198.1"
                     /translation="MQYALGAIGLVLVATSSVAQAFDDAKYPDLWGQWVGVRIPGVGG
                     QPAFDPTKPWGLGQQAPLTPEYRKVLEESIAEQAKGNQGNWLSGISCLPPGMPAMMTL
                     YRPMEIVVLPDVTYIRIDHTHQSHRRIFTDGRDWPEDFLPSFRGYSIGQWIDTDGDGK
                     YD"
BASE COUNT         1757 a         2825 c         2997 g         1736 t
ORIGIN      
        1 aaagatgatg ctgttgttgc cgagcccgaa ccacaacagc gccagaggca acagtgcgat
       61 cgccggtagc ggattgaaca tcgcggtcag agtttcgagg agatcgttgc cgatccgcga
      121 ggtcatcgcg agaatcgtaa aaccgaacgc cagtacgacg cccgccccgt agccgatgag
      181 caacacgctg atcgacactg cgctccgcgc taccaattcg ccgctggcaa agccgttcca
      241 tagcgccgcg aatgtggcat tgagcgttgg aaacaacagc acattgtcga gccagtccgc
      301 ataagcctgc cacgcaatcg ccagcattac gacgatgaag ctcttgcgcg caacggtcga
      361 attgtagagc cgctcccagg tggtgagcgg gatggcggcg accggcgcgt cggctgcagc
      421 cacaaagtcg cgaatgaagt cctggcgtgg cgccgtcgcc ggctgtggaa ctgggctaga
      481 cgagggcacg gcgcgcctcc tcacttgtgt cgcagccgcg ttcgaacagc agccggtgga
      541 tggaatccga cagcttcgcg ccggtcagcg gatggatatc atctcgaccg tttgatccaa
      601 gctctgcctt gacgcggccc ggatgtgccg acaacagaag gatccggttt ccgatcaaga
      661 ccgcctcgga aatcgagtgg gtgacgaaca ggacggtgaa acgcgtgtcg tcccacagtg
      721 ccaggagttc gtcctgcatc tggcgccgcg acaacgcgtc cagggcggcg aacggctcgt
      781 ccatcagcaa tatatcgggc tccatggcga ggccgcgggc gatcgcgacc cgtgccttca
      841 tcccgcccga cagcatgtgt ggatagacgt ctgcaaagcg cgccagcccg accttctcga
      901 tgcaggcaag cgccttttca tcggcagccc gaccggtaag cgtgccgctg atgcgcagcg
      961 cgaaggtgac gttttgcttg acggtcttcc acggcaggag ctggtcgaac tcctggaaga
     1021 ccatgacgcg atctggcccg ggccgcgaga tctcacgtcc gctgagcgtg atgcaacctt
     1081 cgattggcct gatgtagccc ccgaccgcct tgagcaaagt cgacttgcca caacctgacg
     1141 gcccgagcac gacgtagcga tccgagcgca tgatgtcgaa atcgatgcgg tagactgcgg
     1201 tcaacagtgt ctgcggcgtc ttgtattgga tagtgacgcc gcggacccgc agtaggggag
     1261 ccggaagatt cgggccagta gcatacggca tcggcggttc cgtctccatg tcgcttctcg
     1321 gaacctccta gatatcgctt tgcctgcatg ttaggagcgg cagttacgac ggtcaattgc
     1381 gccccgggga cagcggaggc cagcgtgcgc gccaccacca aattcaaatc catgctgggc
     1441 ggcgccattg tggtcgcccc gggggcgttc gacggcctgt cggcgcgcct tgtcgagcag
     1501 gcgggctttg cagccgtcta tgcgagcggc ggcgccattg cgcgctcaac tggtgtgccc
     1561 gacattgggc tgatcacgcc ggatgaaatt gtccagcgac tggccgagat ggtcgaagcc
     1621 gtaggcgttc cggtgatcgc cgatgccgat accggctatg gcaatgcgct cactgcacag
     1681 cgcgctgccc gtgccttcga gcgcgccggc gttgcggcgc tccatctgga ggaccagacc
     1741 ttcccgaaga agtgcggcca ctacgacgat aaggcgctcg tgcctacgtc cgagatggtg
     1801 cagcggctgc atgcggtgcg cgacgcactg cacgacccgg atttcatcgt cattggtcgc
     1861 accgacgcca ttgcggtcga aggctacgct gcggcgcttg accgcgcctc tgcgtatctc
     1921 caagccggtg ccgacatgat cttcgtcgaa gcgccgacca gcgaggagca gatcgccgac
     1981 atcgcgcggc gcctgccggg gtacaagctg atcaatatgt tccatggcgg caagacgccg
     2041 ctcttgccgg cctcgcgcct gcaggatttc ggctatcacg tggtcatcat tccgagcgat
     2101 acccaacgcg ctgccatcaa ggcgatgcaa cgggtgctgg cgacaattgg gcgcgacggc
     2161 agcgctgccg ccatgatcga cgacatggcg tcctttaagg atcgcgaagc tgtcgtcgac
     2221 accgccggat ttctggcgcg tgaccggcgg tattccgcat gagccacggc tccggcggtg
     2281 gcaatcctta taccacaggt atcgcggcgt tcgtcgccgg tcttacctat gagcgcattc
     2341 cgggcgacgt gattgcgcgc atcaagctgc tgatcctcga ttcgctcggc tgtgcgctct
     2401 acggcaccgc actgccgtgg agccggatcc tgatgacgac gctgggtggg ctcgaccaga
     2461 ccacggcctg caccgtgtgg ggcactgacc ggtgtctgtc cgccccccac gcggcgctcg
     2521 tcaacggcac cctggtgcag agcttcgaac tcgacgacgt ccatcgggcg ggcgtgctcc
     2581 atgtgggtgc tgtgacgctg ccgtcgctta tggcggtggc ggagttgcgc tccggcgtga
     2641 gcgggcgaga cttcttgcgc gccgcagtgg ccggctacga gatcgggccg cgcgttggct
     2701 tatgcatggg gccagagcac attggccagg gctggcactc cggcgcgaca gtcggggtgt
     2761 tcgcggcagc ggcaggcgcc gcagcggggc tgcggcttcc gatcgaccag acggtgcacg
     2821 cgctcggcat agccggcacg caggccgccg gcctgatggc ggcgcaatac ggcgccatgg
     2881 tcaagcgcat gcacgcgggc cgcgccgcgc agagcggtct ttatggagca ttgctggccg
     2941 aggcgggctt caccggcatc gtggacgtgt tcgagagtcc gtatgggggc ttctgcagca
     3001 ccttctcacg ctcctccgat cgcttcaact tggccgagct taccgcaggt ctcggcgagc
     3061 ggttcgagac gttgggcgtt gcgctcaagt tctattcctg cgtgggcagc aatcacacga
     3121 cgctagacgc catccggacc atcagcgcgc gtcgccggtt ccgggcggaa gaggttgccc
     3181 ggatattggt ccacggctcg caggcgaccg tcgatcatgt cggctggccg tataagccgc
     3241 aaggtctcac ctcggcgcag atgaacctgc cgttctgcat cgccacactg ctggccgaag
     3301 gtgacgtctt cgtcgatcag ttctccgacg ccgccgttac cgacccacgc cgcatggggc
     3361 tcgccgccaa ggtggaggtg gtgcacgatc ctgctatcac atcgcgcggc gccaagctcc
     3421 gccatatggt gcgtgtcgaa atgcacttca ccgacggcac actagagagc gagaccgtgg
     3481 aggcgccgcg cggcagcgag cagaagttcg cgagcgaagc cgatgtcgtc gaaaaattcc
     3541 gcaagctcgc gcgccacacc tgcggcgacg cgcaggccga gcggattgtc gaactggtat
     3601 taggatgcga caaactggcc gatatcggcg cactggtatc ggcgctcatg aagaagaaac
     3661 cataagaaca acgcgggcac gcgccttcga caggaggaag gccccgatga agggcaaggc
     3721 attggcacta agccggagcc tcgccgcgtt tgcggtcggg ccgggacggg gaggtcgagc
     3781 cggctatcag gccgggagga ggcgacaacc gcgcaatgat taagatgccg cgtttgggcg
     3841 ctgagcccac gcggcacctg aggcgtcggc ggatgggcac gctttgccca tcgtagtggc
     3901 ctcctttaga aggagggcgg gacgccgctc tgcttcttgc ctcagcgcaa tgaggcccgc
     3961 ttacccggct tgcccgtcgc cgcgtggccg ccatcgggga tcaccatggt gttgatgcgc
     4021 ttgggcacct caccgaccgt aatagccttg acgaacttca tgcccgcaac atcgatcacc
     4081 gacacggaac gctgcccggc gttggaaacg tagagatact tgccgtcggg cgtgaacgtg
     4141 gtccagttcg ccaccgccga gatgggcatt gggtttccgg cgactttgat gctcggcagt
     4201 tcgacgctgc cgatctgctt taaggtgtcg agcgcataga cgtaaaccgc gttattcggg
     4261 atgctggtaa cccacagggt cttgttgtcg ggcgccacgc cgatcccgtg ggacggctca
     4321 ttggtgcggt agccgccatg gtcgaactgc tgtgggggct ccggcagcgg aaccttggta
     4381 agttccttgc gctcggcgaa atccaccacc gagaagccgt tgagattgga catctggatg
     4441 aagattcgct tggtcgagcc gtccggattg gcctcgatgg ccatcgggcg gacgccgagg
     4501 tccatctgca gatcccacgc gaggtcctcg gtggcgagat caaacacata gagcttcttg
     4561 gccggaatcg agccgccgat gacatatttg ctgtccggcg tgatgtagac gttgtgcagg
     4621 cgtccgccgt tggtcgagat ggtcttcttg agcgtcaggg tcgcggcgtc gacgatgtcg
     4681 agaccaccct tcccgcgcgc caccgccacc gcgatacggt cgccgttctt ggtcaccgcg
     4741 atgttgttgg ggcgatcgct caacggcacc ttcttgatca gcttgccgga cttgcgatcg
     4801 aacacgtcaa gggacgaggt ctcctcgttg ctgacataga cgcgcgcgcc gtccggcgag
     4861 aagttgacgc catgggctcc ttcgatgccc ttgatctcct gcacgacctt gttggtcgcc
     4921 ggatcgacca cgtgaatgct gtcaccggcg ctgttggtga tgtagatgcg aaccatgttc
     4981 gccgacgccg gcaccggcgc caacgccacg gccaggaccg gtatcgcaaa tttgagatgg
     5041 ggtaaggcct tcatgggacg tccgctcctt ggatttgtaa ttgcccccgc aggctacgcg
     5101 gacgggtcgg gatacacaag gtcgtcgtcc cgaggctggt cattccggag cgccctcttg
     5161 ggcgagcccg gaatccataa ccacaggtgg aaatgggacg gggataatca gtcgaaaaac
     5221 tgatacgcag gggttatggg ttgcgtgttc gccgcttcgc ggcgccccgg aatcacgacg
     5281 aggggtgtac atttcatgcc gtccaaaaac ttctccgcca tcgcccctga tgcacttaac
     5341 gaaacgcagg ccaaggccga gctcaagcgg cttgcggccg agatcaccgc acacgacaaa
     5401 cgttattacc aggaagacgc gcccaccgtt tcggacgccg aatatgatgc tctgcggcaa
     5461 cgcaatgccg cgattgaggc gcggttccgg gacctcgtcc gccccgattc accgagccgc
     5521 cgggtcgggg cggcgccagc ggcaaaattc gccaaggttc ggcacgccgt gccgatgctt
     5581 tctctcgaca acgccttcgc ggaacaggac gttgtcgatt ttgcgagtcg cattcgccgt
     5641 ttcttgcgcc tcggagaggg cgacaaaatt gccttcagcg ctgagccgaa aatcgacggc
     5701 ctgtcgatgt cgctgcgcta tgagaacggc aagcttgtcg tcggtgccac acgtggcgac
     5761 ggcaacgagg gcgaggacgt caccgccaac gtcaaaaccc taaaggacat tccgcaccgg
     5821 cttaaggcaa ggggcgtacc gcaggtgtgc gaagttcgcg gcgaaatcta catgaccaag
     5881 gccgctttcc tcgccctcaa taaacgtcaa tccgacattg gcgggcaggt atttgccaat
     5941 ccgcgcaact cggcggccgg ctcgcttcgg cagaaggatc cgtcgatcac ggcatcgcgg
     6001 ccgctcgctt tcttcgccta tgcatggggc gatatgagcg aaatgccggc cgatactcag
     6061 tccgggatga tcaactggtt cgcatcctgc ggctttaaga caaatccgct tgcgaggatg
     6121 tgccaatcgg tcgaagcgtt gctggaattt catcgcgaga tcgaggtgca gcgtgctgtg
     6181 ctcgactacg atatcgacgg cgtggtctac aaagtagatc gcctcgactg gcaggagcgt
     6241 ctcgggttcg tttcacgtaa tccacgttgg gcgatcgctc acaaatttcc ggccgagaag
     6301 gcgacgaccg ttgtcaagga catcgagatt caggtcggcc gcaccggagc gctcacgccg
     6361 gttgcgaagc ttgagcccgt gacggtaggc ggcgtcgtgg tgcagaacgc aacgctgcac
     6421 aatgccgacg agatcaagcg gttggatatc cgggtcggcg ataccgtgac gatccagcga
     6481 gcaggtgacg tcattccgca ggtactgggc gtggtcgagg acctgccgcg cggggccacg
     6541 ccgtatcaat ttccgaccca ctgtccatgt catctgcata ccgaggtgat ccgcgaaagg
     6601 acagcgaccg gagaggaagg ggcggtcgcc cgctgcagcg gcgaattcgc ctgcccctat
     6661 caaaccgtcg agcatctcaa gcatttcgtg tctcgccgcg ccttcgacat cgaaggtctg
     6721 ggcgagaaac agattgagct tttctacgaa cagaaatgga ttcaggaacc ggccgatata
     6781 ttcacgctgg aggcgcgcaa cgaagaaatg cgtctccagg aggtagaggg atttggcgaa
     6841 acctcggtgc gtaacctgtt cggcgccatt gcggcgcgcc gagaaatttc gctggagcgg
     6901 ttcatctatg cgctcggcat ccgacatgtg ggcgagacca ctgcggtagc gctcgcgcgc
     6961 ggctatggca cctgggaggc cttccatgaa gcgtgcctca agctcgccag gggcgacgag
     7021 gagacgaagg aggagatgga tgcgctcgat cagatcggcg acacggtaat cgagagcctg
     7081 cgtgactatt tcggcgagcc gcacaacgtc aagcgcattg aacgtctggt cgagcaggtg
     7141 cggattcgcg atgccgaaaa gccgcgctcg gattccccgg ttgccggcaa gaccgtggtg
     7201 ttcaccggct cacttgaaaa aatgacgcgt gacgaggcca aggccatggc ggaacggctc
     7261 ggcgccaagg tggccggttc ggtgtcgaag aagaccgact atgtggtcgc cggcccgggc
     7321 gcgggttcaa agctcgacaa ggcgcgggag gcgggagtca acgtgctcac cgaggacgag
     7381 tggttagcgt tggtcgggga gcgataggct gtcaatccgg ctctcgggtg ggcaaaagca
     7441 aaggcgcgcc caccatggcc gagcctggtg ggcagggcgc gattggcaag cgtagccacc
     7501 gacacggcgg caggcgcctt ttccacccta cggctgctcg ctcgcaatca ttttctgcaa
     7561 gatgcgcttg tattgcaccg gaccgacatc gatcgacaag atgacgggat cgaccgatgt
     7621 ttccgcgtta tcgatcatct cctgttgcgc ttcgatgacg ggcgcatcct gctcctcgaa
     7681 ggcaaagcgg cgggtcgccg atatcttttc ttgaatctgc gcgttcaact catcgtccat
     7741 cgtcaggacg ttgaaccgca cggccgtgaa gaaatagtgg gtggtgcggt cgctttccgg
     7801 cgtcagcata tggatggcgt gatagccggt gccgctttca tagaccgcgc ccggcaagca
     7861 gatgccggtc aggagacgca tggtgctcgg cgccatccag cgcaagcggg tgaatttgtc
     7921 gacccgttcg ggcagtgacg gcatcagaat tgcgaacaac ccaggcgccg tggcattggc
     7981 ggcgtggcgg ccgacaatga tgtcgtcgcc ttcctgctcc acggaaatct ccgcatcgac
     8041 ggtgtcggca ttgcccagaa tgccttcatg caggaaacag gtgtggctga gatcgagcag
     8101 gttatcgatg atgagctcgt agttcgctcg gatcgtgatc cgatcgcgct tggtggcatg
     8161 cgcttccggt acgtaatcga gcacgctgaa atccggcact ttcgacagat cggcggcgcg
     8221 ctcgcccatc cagatccaga tcgccttgtg cttctcggtg accggatagc tgcggacgcg
     8281 taaccttgaa ggaatatgct gcccgtgcgg gttgaacgcg caggcgcccg tcgcatcgaa
     8341 ttcaagcccg tgataggggc actggacgcg gtcgccgtgg accaccttgc ccatatgcag
     8401 gggcgcaaac cgatgcgggc agcgatcttg cagcgccgcg acatggccat cggcttggcg
     8461 atagagaacg accggctcct tcaggatcgt gcggctcagc aattgcccct cctggaggtc
     8521 gtccgaccac gccgccacat accacgcgtt gcgcagatag gtgccgctcg ccatcttctt
     8581 cttgttttca atgagctgcg tttcgaggcc agttgcgcgg gtcatcgcgt gttctccctc
     8641 catcggcgaa cgccgaatat ctttcggcct ttccgcgccg gtcaaggccg cgtcagcgcc
     8701 ttcacacctg cgcacccgtg gagaggcatt gactttaccg attgcagttg ccgtgtcagg
     8761 atcataccgg cccgcaaggc ggcacgacat aacgattgaa aaaataaatc gatgacgagg
     8821 gaaaacgcca tgcaatacgc gctcggtgcg attggattgg tactggtcgc gacctcatcg
     8881 gtcgcacagg ccttcgacga tgcgaagtat ccggacctgt ggggccagtg ggttggtgtc
     8941 cgcattccgg gcgtcggcgg ccagccggcg ttcgatccga ccaagccgtg ggggctgggc
     9001 cagcaggcgc cgctgacgcc cgaataccgc aaggtgttgg aggagagcat tgccgagcag
     9061 gccaagggca atcagggcaa ctggttgtcc ggcatctcct gcctgccgcc cggcatgcct
     9121 gcgatgatga cgctctatcg tccgatggaa atcgtcgtgc tgccggacgt cacctacatc
     9181 cggatcgacc acacgcacca atcgcaccgc cggattttca ccgacggccg cgactggccc
     9241 gaggatttcc taccaagctt ccgcggctat tcgatcggcc aatggatcga caccgatggc
     9301 gatggcaagt acgac
//
LOCUS       DATILV010000181         6499 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4642852, whole genome shotgun sequence.
ACCESSION   DATILV010000181 DATILV010000000
VERSION     DATILV010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6499)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6499)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6499
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4642852"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..302)
                     /locus_tag="VLJ17_04135"
     CDS             complement(<1..302)
                     /locus_tag="VLJ17_04135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22199.1"
                     /translation="MFNLTDEFFHITVINDAQAPALYCHAQTAGRKGTDEHHLFGVLA
                     DVDESAGPREPGSELTHVQIALLIRLGKSKKGRIEASAVVEVELIGLIDDGLRIGRR"
     gene            369..935
                     /locus_tag="VLJ17_04140"
     CDS             369..935
                     /locus_tag="VLJ17_04140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22200.1"
                     /translation="MFKLTPDGLELVEAAPGIDIERDIFAQMEFKPIVRNDPVIMDER
                     IFSSEPMRLRDDLTRIPLERRFTFHPQENIFFVNFEGHVVRNHNDVEQVRHIVETMLS
                     GLGRKVYAIVNYDNFTILPDIIDEYSAMVRDLVDKFYFGVTRYTTSGFLRAKLGDALK
                     QRAVAPHIYESAQEASAHLRELERKDTG"
     gene            955..2805
                     /gene="phaC"
                     /locus_tag="VLJ17_04145"
     CDS             955..2805
                     /gene="phaC"
                     /locus_tag="VLJ17_04145"
                     /inference="COORDINATES: protein motif:HMM:TIGR01838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0042619 - poly-hydroxybutyrate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I poly(R)-hydroxyalkanoic acid synthase"
                     /protein_id="HSV22201.1"
                     /translation="MNKPTKPVAGPNSRGRDATKAAQNDVTAMLSPGAIDALADIAKR
                     TTQLTRLGAERLKGDDGYQVIDPRTVATTFQEFVQTAQADSAQLVKEQFKLWTDMTLL
                     WQKTASRFLFNAPVEPVISPSPQDKRFKSELWVENCFFDYMKQCYLLMSRYVQASVHS
                     VRGVDPHTQHKAEFYTRQFLNALSPTNFAATNPAVLKTTIASRGENLIKGIRNLIEDI
                     ERGGGRLSLKMSDLSAFQFGKNIAISPGKVIFQNQLMQLIQYAPSTPAVHRRPLLIVP
                     PWINKFYILDLKPKNSFIKWCTDQGHTVFVISWVNPGTELADKGFADYLLEGPVEALD
                     AIERATGEAEANVIGYCIGGTLAASTLAYMAVRKDRRIASATLFTTLLDFADVGDISV
                     FLDDAQLQLADEHMNRLGYLEGHHMAEAFNLLRENDLIWFFVVNNYLMGRDPAAFDLL
                     YWNADSTRMPATMHSFYLRNMYHKNVLKEAGGINLANVPIDLRKIEIPVYFLSTREDH
                     IAPWRATYAGARLVSGPVRFVLGASGHVAGVINPPSANKYGYWTSKTLPADADNWLNG
                     GEFHQGSWWTDWAEWIAGYGGGQVPAREPGSGELAAIEDAPGSYVKVRAV"
     gene            2907..4451
                     /locus_tag="VLJ17_04150"
     CDS             2907..4451
                     /locus_tag="VLJ17_04150"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003941 - L-serine ammonia-lyase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009063 - amino acid catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HSV22202.1"
                     /translation="MNVDRRSFLMRNAAISAAAVMTGSTWTPQARAQQAAKEAVAPKL
                     GATLSPDLDVVAKSKGPVMTVADEFYKVGPGPSSSHTIGPMRISYDFYQRCTKLPADQ
                     LAQATGLKVHLFGSLSATGKGHGTERASLAGLVGKEPATVDPLFLDEMAAKPTQAYPV
                     KLGDKTFNLTLADIVYDETKGDFPHPNTMTCKLMAGDKAIYEQEYYSVGGGFIEWKGY
                     QPPKKGRPKYPYATMKELRQHAENNNLSIAQIVMANEVAVSGKTEDEINAFLDKIAGA
                     MLATVKSGLSVKEGVLPGPIKLHAKAATVWERAQDEKYESDRAIAQVAACALAASEEN
                     ARGHLVITAPTGGSAGVMPAVVYALVESRRKVPMEKIREGLLAGLAVGYLCKHNATLA
                     AAEGGCQSEIGVASAMAAALIAQAMNSSPLVIENAAESALEHHLGMTCDPVAGYVQVP
                     CIERCAFGAVKAWTAFMVATNEIASRHRVDLDTTIKTLADTGRDMNAKYKETSEAGLA
                     ANLVLC"
     gene            5019..5801
                     /gene="fabI"
                     /locus_tag="VLJ17_04155"
     CDS             5019..5801
                     /gene="fabI"
                     /locus_tag="VLJ17_04155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018117199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004318 - enoyl-[acyl-carrier-protein]
                     reductase (NADH) activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HSV22203.1"
                     /translation="MIPPVKAKLLEGKRGLVVGIANDRSIAWGCAKAFRAFGAELAVT
                     YLNEKAKKYVEPLARELEAPIMMPLDVDAPGQIEAVFERIGDVWGKLDFVVHSIAFSP
                     KDTLQGRVVDVPRDGFLTTMDVSCWTFIRMAHLAEPLMRKGGTLFTMTYYGSQMVVKN
                     YNVMGVAKAALESAVRYIAAELGPKGIRVHAISPGPLATRAASGIPEFDALLDKARAK
                     APARSLVTIEDVGIATAFLAHDAARLITGETLYIDGGYHIID"
     gene            5871..6329
                     /locus_tag="VLJ17_04160"
     CDS             5871..6329
                     /locus_tag="VLJ17_04160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HSV22204.1"
                     /translation="MRVFKDFSEIKAAVGAEVGVSDWEQVTQERIEQFAQATGDDQWI
                     HVDVERAKRELPGRTTIAHGLFTLALVPEFVRSVMHLEGVKNTLNYGANRVRYLAPVP
                     AGSLLRARVTIVAADDAPSNGLRVTYGVTIEIQDADRPACVAEVIAVHYR"
BASE COUNT         1501 a         1792 c         1881 g         1325 t
ORIGIN      
        1 cggcgaccaa tgcgcaaacc atcatcgatc aaccctatca gttcgacttc tacgacggcg
       61 gaggcctcga tgcggccttt cttggacttg cccaagcgga tcaacaaggc aatctgaacg
      121 tgagtaagtt cggaccccgg ctcgcggggg ccggcggatt catcaacatc agccagaacg
      181 ccaaaaaggt ggtgttcgtc ggtaccttta cggccggccg tctgcgcgtg gcaatagagg
      241 gcgggcgcct gcgcatcatt aatgacggtg atgtgaaaaa attcgtccgt gaggttgaac
      301 atcggacatt ctctggcagc gtttcggtgc gcaggggaca accggtgctc tacgtaacgg
      361 agcgctgtgt gttcaagctg acgccagatg gcctggagct tgtcgaagca gcgcctggaa
      421 tcgatatcga acgcgacatt tttgctcaaa tggaattcaa gccgatcgtc cggaacgatc
      481 cagtcatcat ggatgaacgc atattctcga gtgagccaat gcgattgcgc gacgacctaa
      541 ctcgtatccc gctcgaacgc cgttttacct ttcatccgca ggaaaatatt ttctttgtta
      601 atttcgaagg acacgtggtt cgcaatcaca acgacgtcga gcaggttcgt cacattgtcg
      661 aaactatgct ctccgggctg ggacgcaagg tctacgctat cgtcaactat gataatttta
      721 caattcttcc cgacataatc gacgagtatt cggcaatggt acgtgacctc gtcgacaaat
      781 tttatttcgg cgtcacgcgc tatacaacca gcggcttctt gcgagccaag ttgggcgatg
      841 cgctcaaaca gcgcgcggtg gcgccacata tctacgagag cgcgcaagaa gcaagcgccc
      901 acctgcgcga gctggaacgc aaagacacag gttgaacagc cgacgagata tcgcatgaac
      961 aagccaacga aacccgtcgc cgggccaaac tcccgggggc gagatgccac gaaagcggcg
     1021 cagaacgacg tcacagcgat gttgagcccg ggcgccatcg acgccctcgc ggacattgcc
     1081 aaacgaacaa cccagctgac ccgtctgggt gctgaaaggc ttaagggcga cgatggctat
     1141 caggtgatcg acccccgaac agtcgctact acgttccagg agttcgtcca gaccgcccaa
     1201 gctgattccg cacagctcgt taaagagcag ttcaaacttt ggacggatat gacgctgctc
     1261 tggcagaaaa cggcctcgcg ctttctattc aatgcgccgg tcgagccggt tatttcgcct
     1321 agtccacaag ataagcgttt taaaagtgaa ctgtgggtcg agaattgttt ctttgactac
     1381 atgaagcaat gctaccttct gatgtcgcgg tacgttcaag catcggtgca cagcgtccgg
     1441 ggcgttgatc cgcacaccca acacaaagca gaattttata ctcgccagtt cctcaatgct
     1501 ttgtcgccta ctaacttcgc tgccactaat ccggctgtgc tcaaaacaac gatagcgtct
     1561 cggggggaaa acctgatcaa ggggatcagg aatttgatcg aagacattga gcgtggcggc
     1621 ggccggctaa gtctgaagat gagcgatctg tcggcctttc aatttggcaa gaatattgcg
     1681 atttctcccg gtaaggtcat ttttcaaaat cagcttatgc aacttatcca atacgccccg
     1741 tcaaccccag cagtccaccg gcggcctttg cttattgtgc cgccttggat caataaattc
     1801 tatatcttgg acctcaagcc aaaaaactcg ttcatcaaat ggtgcaccga ccagggtcac
     1861 acagtgtttg tgatctcctg ggttaatccc ggaacagaac tcgcggacaa gggatttgcc
     1921 gattatttgc ttgagggacc ggtggaggct cttgatgcaa tcgagcgggc gaccggggaa
     1981 gcggaggcca acgtcattgg atattgcatc ggcggtacgc ttgccgccag cactcttgcc
     2041 tatatggcgg tgaggaaaga tagacgcata gcctcagcga ccttgttcac aacccttctc
     2101 gactttgctg acgtaggcga tatctcggta ttccttgacg atgctcagct ccaacttgcc
     2161 gacgagcata tgaatcgcct tggttatctt gaaggtcacc acatggcaga ggcatttaat
     2221 cttctgcggg aaaatgatct gatctggttc tttgtggtga ataactattt gatgggtcgc
     2281 gacccggctg cgtttgacct tttgtattgg aatgcggatt cgacacgcat gccggcgacg
     2341 atgcacagct tctatctgcg caatatgtat cacaagaacg ttttgaagga agcgggaggg
     2401 atcaatctcg ccaatgtacc catcgatctg cgaaaaatcg agatccctgt ttactttcta
     2461 tcaactcgcg aagaccacat cgcgccgtgg cgcgcgacct atgcgggggc gcggctggtc
     2521 tcagggccgg ttcgtttcgt actcggcgct tcaggtcatg tcgccggcgt aatcaatccg
     2581 ccgtcagcaa ataaatatgg ctattggacc agcaagactt tgccggccga cgcagataat
     2641 tggctcaacg gcggcgagtt tcaccaaggc tcctggtgga ccgattgggc cgaatggatt
     2701 gccggttatg ggggtgggca agtcccggcg cgggagccag ggagcggaga actcgcggca
     2761 atcgaggatg ctcccggctc gtacgtcaaa gtgcgcgccg tctgaacacc aaagcgcaaa
     2821 ttcacaacca ggagagtatc gtgatgagta gctcaagcaa gtatgacgag ccgttcccgg
     2881 cattgcccga ggtatcaggc ctcccgttga acgtcgaccg ccgatccttc ctcatgcgca
     2941 acgccgccat cagcgcggcg gcggtgatga ccggcagcac ctggacgccg caggcacgcg
     3001 cccagcaggc ggcaaaagag gcggtggcac ccaaattggg ggccacgctc tcccctgatc
     3061 tcgacgtggt ggcgaagtcc aaaggtccgg tgatgaccgt ggcggacgaa ttctacaagg
     3121 taggtcccgg cccctccagt tcgcatacga tcgggccgat gcgcatttcc tacgactttt
     3181 accaacgctg cacgaagctg ccggccgacc aattggcgca ggccaccgga ctcaaggtcc
     3241 atctgttcgg cagcctgagc gccaccggca agggacacgg caccgagcgt gcctcgctgg
     3301 cggggttggt gggtaaggaa ccggccacgg tggacccgtt attcctggac gagatggctg
     3361 ccaaacccac gcaggcctac ccggtaaagc ttggcgacaa gacgttcaac ctgacactgg
     3421 ctgacatcgt ctacgacgag accaagggcg acttcccgca cccgaacacg atgacctgca
     3481 aacttatggc tggagacaag gcgatctacg agcaggagta ctattccgta gggggtggct
     3541 tcattgagtg gaaaggctac cagccgccca agaaaggccg gccgaagtat ccttacgcaa
     3601 ccatgaagga gctacgtcag cacgcggaga acaacaacct ctcgatcgca cagatcgtta
     3661 tggcgaacga ggtggctgtg tccggcaaga ccgaggatga gatcaacgct tttttggaca
     3721 agatcgccgg cgcgatgctg gcgaccgtga aatctgggct ctccgtgaaa gagggcgttc
     3781 tgcccggccc catcaagctg cacgcaaagg cggccaccgt gtgggagcgg gcccaggacg
     3841 agaagtacga gagcgaccgc gccattgcgc aggtcgccgc ctgcgccctg gccgcctcgg
     3901 aggagaacgc tcgcggtcat ctggtcatca cggctccgac gggcggctca gccggcgtga
     3961 tgcccgcggt cgtctacgcc ctcgtggaga gcagacgcaa ggtaccaatg gagaagattc
     4021 gtgaggggct gctcgccggt ctagccgttg gctatttgtg caaacacaac gcaactctcg
     4081 ccgccgctga gggcggatgc cagtccgaga tcggtgtcgc atcggccatg gctgccgcac
     4141 tcattgccca agccatgaat agctcgccgc tggttatcga aaacgctgca gagtcagcac
     4201 tcgagcatca cctcggcatg acttgcgatc cggtcgccgg ctacgtgcag gttccttgca
     4261 tcgagcgctg cgcctttggc gcggtgaagg cttggactgc cttcatggtc gcgaccaacg
     4321 agatcgcgtc acggcaccgc gtcgatctcg acaccacgat taagaccctg gccgatacgg
     4381 gacgggacat gaacgcgaag tacaaggaga cgagcgaagc cggactggct gcaaacctag
     4441 tgctttgctg aggtgaagca agcgggaagg tgcgtgcgcg catgtaggcc cggacgcacc
     4501 atttctggag acttgatttt aattagacgc tgcaaggaaa aagcgccgac ccagcagcat
     4561 cctgggcatc acccaagcgc tcttgagaag ggtggccgca atatcatgtt gaatggctag
     4621 ggggaagcat cggcaatcga acagaagcgc gactgcgccg tagtcggctg ccaggcccgc
     4681 gaaagctctc gggcgaccgg cagaagaaca gcgataggtg gcaatctgca aatgaggacc
     4741 gaacaatgaa ttcaacgaca ctgaattgga aagtgaagga gggcttggca gttggaaagg
     4801 gcgccacagt tcaggggttt gtcgccatcg tgggaaacaa gaaacttgag atagacgttg
     4861 ccccttgggg cgatggccat ttgaaggcca atggccggga gatcgcccac gttaacgacg
     4921 ccaaggatag acgccaagcc tttcgcaaac tcgcgaagat cgctgaggat tatttgcagg
     4981 ggaacgtaat caaacccgaa agcaagaagt catcttctat gattcccccc gtcaaggcta
     5041 aactcctcga agggaaaaga ggtctcgttg ttggcattgc caatgacagg tcgatcgcct
     5101 ggggctgtgc caaggctttt cgagcatttg gagccgagct agcggtaacc tatctcaatg
     5161 aaaaggcgaa gaaatatgtc gagccgctcg cccgcgagct agaagctccg atcatgatgc
     5221 cgctcgatgt cgatgcgccc ggccagatag aggcagtatt tgaacgcata ggcgacgttt
     5281 ggggcaagct agacttcgtc gtgcactcca tcgctttttc gccgaaggac acgttgcaag
     5341 gacgtgtcgt cgatgtgccg cgggatggtt ttcttaccac aatggatgtg tcctgctgga
     5401 catttattcg catggcacat ctggcggagc cgttgatgcg caaaggcgga actctgttca
     5461 cgatgactta ttacggcagc cagatggtcg ttaagaacta caacgtcatg ggggttgcca
     5521 aggcagcgct cgaaagcgcg gtccgctata ttgcggccga gcttggacca aagggcatcc
     5581 gcgtccatgc catctctccc gggccgctcg cgacacgggc tgcctcaggt attcctgagt
     5641 tcgatgcttt gctcgacaaa gcacgagcga aagcaccagc tcgcagcctc gtcactatcg
     5701 aagacgtagg tattgctacc gctttcctgg cccatgacgc ggcgcgatta atcaccggcg
     5761 aaacgcttta tattgatgga ggctaccaca tcattgatta gggccccctt tgcagtcgtc
     5821 gcgttggctt ggccgatgag actgtattgt tgaaagacag gtgttgcagc atgcgagttt
     5881 tcaaagattt cagcgaaata aaagctgcag ttggtgccga agtcggcgtg agcgattggg
     5941 agcaagtgac gcaggaacgt atcgagcaat tcgcccaggc gaccggcgac gatcagtgga
     6001 ttcacgtcga cgtcgagcgg gcgaagcggg agttgccagg ccgcacaacg atcgcccatg
     6061 gtctctttac attggcgttg gtaccagaat tcgttcgctc ggtgatgcac ctggagggag
     6121 tgaagaacac cctcaattat ggggcgaatc gcgttcggta cttggccccg gtgcccgctg
     6181 gttcactgct gcgggcccgg gttacaatcg tggcggcaga cgatgcaccg tctaatgggc
     6241 tgcgcgtcac ttacggcgtc accattgaga ttcaagacgc tgatcgccct gcttgtgttg
     6301 cagaggtgat cgcggttcat tatcgatgaa actgccacac aaagctaatc ggcgacgcac
     6361 cgtgaaatgc tcccgccaag ctttccggag ccagtatcca aaacggacct gcctctggtc
     6421 agatctgaaa ctccccggag atcaattcgc acccacgtat gtataataat accaattcac
     6481 cccccaggtc gccgagata
//
LOCUS       DATILV010000182        11063 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4386593, whole genome shotgun sequence.
ACCESSION   DATILV010000182 DATILV010000000
VERSION     DATILV010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 11063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11063
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4386593"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..246)
                     /locus_tag="VLJ17_04165"
     CDS             complement(<1..246)
                     /locus_tag="VLJ17_04165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsfS/YbeB/iojap family protein"
                     /protein_id="HSV22205.1"
                     /translation="MPRGSASRSPDLVSKVRPDANETLRIVLSRLDEMKAEDTTTIDL
                     RADSAIADYMVVTSGRSNRHVGAVADQVLGGLHDAGLT"
     gene            complement(452..1174)
                     /locus_tag="VLJ17_04170"
     CDS             complement(452..1174)
                     /locus_tag="VLJ17_04170"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003610125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HSV22206.1"
                     /translation="MTMAAGAVAVPGCGLGAAGKSNRTVSNDAYYRIPPHYPGQRIGL
                     FGGTFDPPHEAHLAASLLAMKRLALDRVWWLVTPGNPLKDTMELAPLDERVMAAREIA
                     RHPRIDVTGVEAEIGVRYSYDTIRYLVSHCTGIRFVWIMGADNLRTFHRWQKWQRIAE
                     LIPFVVVDRLGPSLDATGSVAAQALGRWRVAESEAALLPNRRPPAWVFLHGLKSALSS
                     TALRAERNSQKLRATDTKTDRP"
     gene            complement(1171..2472)
                     /locus_tag="VLJ17_04175"
     CDS             complement(1171..2472)
                     /locus_tag="VLJ17_04175"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004350 - glutamate-5-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HSV22207.1"
                     /translation="MSVLLKKPIEEPEVGDISAIMRPIGANARAAAGILATIGPNEKE
                     CAIKAMAQAVRVATPAILVANGEDVEQAEKAGETAAFVDRLKLDEKRVAAMADGIDTV
                     AALPDPIGTVMSAWDRPNGMRIERVRVPLGVIGVIYESRPNVTADAGALGFKAGNAVI
                     LRGGSDSFRTSCAIHAAIATGLSGAGMPETAIQLVPTRDRDAVGLMLAGLDGAIDVIV
                     PRGGKGLVARVQAEARLPVFAHLDGNCHVYVDKAADLTMAKSIVLNSKMRRTGVCGAA
                     ETLLIDRGAAPTHLVALVRMLIDAGCEVRGDRDTQAADPRVKRATEEDWSTEYLDAII
                     AVKLVDGIDEAITHVERYGSHHTDAIVTADRVAAEKFLGRVDSAIVLHNASTQFADGG
                     EFGFGAEIGIATGRLHARGPVGVEQLTTFKYRVRGSGQTRS"
     gene            complement(3077..5233)
                     /locus_tag="VLJ17_04180"
     CDS             complement(3077..5233)
                     /locus_tag="VLJ17_04180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HSV22208.1"
                     /translation="MAAKRELHLGVAAVALGLALGLGVASTPVSAQQDAPAVSIAATD
                     IGGVVRGPNGPEAGVWVIAETTDLPTRMSKIVVTDDQGRYVIPDLPKANYVVWSRGYG
                     LVDSAKTTSEPGKIVNITAVPAANAAAAAEYYPAIYWYAMLNIPGKEMFPGTGPNGNG
                     MATTMKSQLQWLDQVKTNGCYGCHQLGNKATRAIPSGLGTFKTSVEAWERRVQSGQAM
                     VNMAAALGRQDTKVSLANFANWTDRIAAGELPFAKPDRPQGIERNVVITQWDWADPKA
                     YLHDQVSTDKRKPTVNAFGRNYGATEESTDYFPILDSQANRASMVKMPVRDADMETTK
                     NNTMAPSPYWGEEAIWDSHNSMHNPMMDERGDVWFTSRVGKPENPAFCQAGSDHPSAK
                     AFPIKQSTRHLAFYDPKTGNTKLIRTCFNTHHLVFAEDADNTLWTSAGGPQQGVIGWL
                     NRKVYEETGDEAKAQGWLPIIIDTNGNGKVDDYVQPNQPVDPTKDKRINAGFYGVGAN
                     PVDGTIWGSVLGYPGYVIRLDPKTQLSEVYEPPFPGFGPRGFDIDRNGVAYVPLSSGH
                     MGQFDRRKCKGPLNGPQAAEGKLCPEGWTLIPFPGPQFKNVAESGSAEASYYTWVDQF
                     NTSGLGANVPMATGNANESLMAWVDGKWVNMRVPYPLGFFAKWMDGRIDDPNAGWKGR
                     GVWTTDGNRTPFHRETGKGTQPKVVKFQVRPDPLAR"
     gene            complement(5550..6578)
                     /locus_tag="VLJ17_04185"
     CDS             complement(5550..6578)
                     /locus_tag="VLJ17_04185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22209.1"
                     /translation="MKDNTPLYNLDSATPAQNDSDTPNEINDFGKLRDILSRSRSGDV
                     YCHSALYFAFTGRGTVWTIKHGDNYLVLVRHPNAIGILLVFFPFISDLVDLTEQVQAL
                     CNCKSFLNRFQEVLLARIPESIATEIAKKEVGHNSIDYKLKIIDEVKLDWAYPSYDVC
                     LKRLVGPSESNLKTYRKKVRKFCDQGIEVVEPKAFDQREWRNAVNHVNISWIQTKLKS
                     NNSPQNLGISLADLKDPYRALAELDFTLEIDGLILKRKGAYVAFSLWERPGNGGIVPC
                     IAALPCSHERGLSEYLYYCIAHQLLNEGYDRMCIGGSETLGLDQFKRKLAPIKVHRLR
                     TIRLSPRD"
     gene            complement(6575..7243)
                     /locus_tag="VLJ17_04190"
     CDS             complement(6575..7243)
                     /locus_tag="VLJ17_04190"
                     /inference="COORDINATES: protein motif:HMM:NF013540.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSV22210.1"
                     /translation="MATFLITSRQIRAARGLIGWTQADLAKSAGLARSTVAALEKEGA
                     NPTVDIFNRIRTVLENNQVEFLSQDGVRIRHPMISQDDLPDANRRLLEDIYHVSSQFK
                     DRTGHGDILIFGLQEEDAQKSVGDYLTDHMERLKQAGLHEKILCGPNTRTFVAPRSSY
                     RRLSELDPSQSPIHIYGDKIAVVHWSPKEVVITIESQPIATALRSMFYQIWNTQGGIE
                     GDNL"
     gene            7659..8684
                     /locus_tag="VLJ17_04195"
     CDS             7659..8684
                     /locus_tag="VLJ17_04195"
                     /inference="COORDINATES: protein motif:HMM:NF014062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HSV22211.1"
                     /translation="MTGKTRRGSMSVNPCSAWLLRLVARQFLRRLEADGAIVTVNTPV
                     MAYQKKAVATGRCLSVPLSVGFVVLLSAAVLLAYFAVEPANARQDFSFHVARLSPSDW
                     PTKGPRPFRKRLDAAPGGNGECDRKADPRRPLCQFGNDVATLPDSATSWASVRPLETE
                     PVRNIDGSNSSTSMVRSTLLAPSNPTIVSPSSPTSGLSSQLPSFQGWTWFIVAAILTL
                     GAPFAVVLCFFGLAAVLVGCISLCFDLSWQLQLIAFAVLGIISALLWQRLDRLLSDRN
                     DLIGRCPHALVGRVFRLQSPIVDGIGAVTIGGTLWRVAGRNCAAGEQVKVVDAEGTLL
                     IVDPLEA"
     gene            complement(8791..10944)
                     /locus_tag="VLJ17_04200"
     CDS             complement(8791..10944)
                     /locus_tag="VLJ17_04200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HSV22212.1"
                     /translation="MKTRNSMYLGVAAIAIALAFGAVPTTVMAQQAAPVSIGATDIGG
                     VVQGPNGPEAGVWVIAETTDLPTKMSKTVVTDDQGRYVVPDLPKANYIVWARGYGLVD
                     SAKTTTEPGKIVNITAVPAPNEAAAAELYPAIYWFAMLHIPEKSKFPGTGTGANGNGI
                     PTAMKSQLQWADQVKTNGCYACHQLGNRATRVIPKELGTFKNSVEAWERRVQSGQAMV
                     QMAAALGRQEPKLSIGNLANWTDRIAAGELPFAKPARPQGIERNVVITQWDWGDAKSY
                     LHDQVSTDKRKPTVNPFGRHYGATEESAEWFPVFDSKTNTPTKVTMPIRDPSTESSKN
                     NTMAPSPYWGDEAIWDARTSIHSLIMDERGDVWFTSRVGKPENPAFCQAGSDHPSAKA
                     FPIKESTRHLSVFDPKTNTTKLIRTCYNTHHVVLAEDADNTVWISQGGPQQGVMGWLN
                     RRIYEETGDEAKAQGWAPIVIDTNGNGKVDEYVQPNQPVDPTKDKRINAGLYGVGVNP
                     ADGTVWGSVLGYPGYVLRFDPTTKLSEIYEPPFPGFGPRGFDIDRNGVAYVPLSSGHL
                     GAFDRRKCKGPLNGPQAAEGKLCPEGWTLTPFPGPQFRDIAESGSAEASYYTWVDQQN
                     TAGLGNNVPLATGNANESLMALVDGKWVNMVVPYPLGFFAKWIDGRIDDPNAGWKGRG
                     LWTTDGNRTPFHRETGKGTLPKIVKFQVRPDPLAH"
BASE COUNT         2100 a         3198 c         3276 g         2489 t
ORIGIN      
        1 ggtaagccca gcgtcatgaa ggccccccag cacctgatcg gccaccgccc cgacatggcg
       61 attggacctt ccggaggtca caaccatgta gtcggcgatc gcggaatcag cgcgcaaatc
      121 gattgtcgtg gtatcctccg ccttcatttc gtcgaggcga gagaggacga tgcgaagcgt
      181 ctcattggcg tctggacgca cctttgagac gaggtcagga ctgcggctgg cgctgccccg
      241 cgggattgta actgtcgaca gaggtccttc cctttcggtt ccgctgccca aggcaccctg
      301 cccggggcca ccaccataag ataagagcaa ctggttaaca gtttcaactg ccttctgatc
      361 ctcagccgcc cgttcgagtt gatgcgcgtt gattcttcac catttacata ttcgcctgtg
      421 attgcagtcc tgtcgttgag aaagggttgg cttaagggcg atctgttttg gtgtccgttg
      481 cgcgaagctt ttgcgagtta cgttcggcac gcaacgccgt agaggacaag gctgatttca
      541 acccatgcag aaaaacccag gcgggcgggc gccggttcgg caacaatgca gcctcgcttt
      601 ccgcgacgcg ccaacgaccc agcgcctgag ccgcaacgct gccagtcgca tcgaggctgg
      661 gacccagccg atctaccacg acgaacggaa tcaattccgc aatgcgttgc cacttttgcc
      721 agcggtggaa ggtgcgcaga ttgtcggctc ccatgatcca aacgaagcgg atcccggtac
      781 agtgagatac gagatatcgg atcgtgtcat acgaatagcg tacaccgatc tcagcttcga
      841 caccggtaac gtcgatgcgt gggtgtcggg cgatctcgcg cgcggccatg actcgctcgt
      901 cgagtggggc aagctccatc gtgtctttga gcggatttcc gggcgtcacc agccaccaca
      961 cccgatcgag agcgagccgt ttcattgcca gcaggctggc agcaaggtgc gcctcgtggg
     1021 gcgggtcgaa ggtcccaccg aacaatccga ttcgctggcc gggataatgt ggtggaatgc
     1081 ggtaataggc gtcattcgaa acggttcggt ttgatttccc ggcagcgcca agaccgcagc
     1141 ccggcaccgc gacggcaccg gccgccatgg tcatgaacgt gtctgcccag agccgcgcac
     1201 gcgatattta aaggtcgtga gttgttcgac gccaaccgga ccgcgcgcat gcaggcgtcc
     1261 ggtggcgatc ccgatctctg ctccgaagcc gaattcaccg ccgtcggcga attgcgttga
     1321 ggcgttgtgc agcacgattg ccgaatcgac ccgacccaaa aatttctcgg cggcgacgcg
     1381 gtcggctgtc acgattgcgt cggtgtggtg ggagccatag cgttcgacat gggtaatggc
     1441 ctcgtcgatt ccatcgacca gcttcacggc gatgatggcg tcgagatatt cggtgctcca
     1501 atcttcctcg gtggcccgct ttacccgagg gtcggccgcc tgcgtgtcgc ggtcgccgcg
     1561 tacttcgcat ccggcatcaa taagcatgcg taccagcgct acgagatgcg tcggcgcggc
     1621 gcctcggtcg atgagtaaag tctcggcggc gccgcaaacg cctgtgcgcc gcatcttgga
     1681 attcagcacg atcgattttg ccatcgtgag gtcggctgcc ttgtctacat agacgtggca
     1741 attaccgtcg agatgggcaa aaaccggcaa acgtgcttcg gcttgcacgc gggccaccaa
     1801 tcccttgcca ccgcgtggga cgatcacgtc tattgcgccg tcgagcccag ctagcatcag
     1861 acccacggcg tcgcgatccc gggtcggcac caattgaatc gcagtctccg gcatgccggc
     1921 gccggacagc cccgtcgcaa tggcggcgtg aatggcgcag gaggttcgaa agctgtctga
     1981 gccgccgcgg agaatgactg cattcccggc cttgaagccg agtgccccgg cgtccgccgt
     2041 gacgttcggg cgactctcgt agatgacccc aatgacgccg agcgggacgc gtacccgctc
     2101 gatgcgcatt ccgttcggcc gatcccaggc cgacattacg gtaccgatgg gatcaggcag
     2161 cgccgcgaca gtgtcgatgc catcagccat ggcggcaacg cgcttctcat caagcttgag
     2221 acggtcgacg aaggcggcgg tctcgcccgc cttctcggct tgctccacat cttcgccatt
     2281 agccaccagg attgccgggg ttgcgaccct gacggcctga gccatggctt tgatcgcaca
     2341 ttccttttcg ttcggcccga tggttgccag aataccggcg gcggcacgtg cgttggcgcc
     2401 gatcggccgc attatggcgg agatatcccc aacttcgggt tcttcgatgg gttttttcag
     2461 caagacgctc atctcggcca ctttctggtc acgatgcctt cctagcacgt caagtaccgg
     2521 gcggcgagcc tgcgtacggc gccaaagggt ctgttcgcat tactcgcaaa ccggaaccgg
     2581 aaccaagtct gggacgagag atcttaccag aagtagtgag gcgttgcgtt cgacgttatc
     2641 agaagtgttg cgttcgtcag aagtgttgcg tttttcgaaa ctggttgcat ctcgcgttga
     2701 ttgcggttga gttccgagtg tgatggatgg agcgatgata atggccacgc agtctcggct
     2761 tcccgcgcgg ttcccggtag ggacgcgcta cgttgtggaa ggcgagccag gtataggcgg
     2821 cgaattacga attgtatcac gttacgtgat catgccgagc ggggcacgct gtgacctgac
     2881 gatgcccgag cgagtgcgga attgggccca tctcgctcac aagcggtgtg gcagtcaata
     2941 gcgtgctggg gactacgcag cgtcgcgccg ggtaaatccg tcgcgccgca tcggtgcgca
     3001 tccgtccaga gacactcgtg cccggccggt ggccgggcac ttttttcggt ggtggccgaa
     3061 tcaaatcaaa gttgcattac cgggccaagg gatccggacg aacttggaac ttgacgacct
     3121 tgggttgggt tcctttgccg gtttcgcgat ggaacggtgt gcggtttcca tcggtcgtcc
     3181 agacgccgcg gcccttccag ccggcatttg gatcgtcgat gcgaccatcc atccatttcg
     3241 cgaaaaagcc gagcggatat ggaacacgca tgttgaccca cttgccatca acccaggcca
     3301 ttagcgactc attggcgttg ccggtcgcca tcgggacatt ggcgccaagt ccggacgtgt
     3361 tgaattggtc gacccaggtg taatagcttg cctcggcgct gccgctctcg gccacgttct
     3421 tgaactgcgg ccccgggaac gggatcagtg tccagccctc tggacacagc ttgccctcgg
     3481 cggcctgtgg tccgttgagc gggcccttgc acttacggcg atcgaactga cccatgtgac
     3541 cgcttgagag cggtacatat gcgacgccgt tacggtcgat gtcgaagccg cgcggtccga
     3601 atcccgggaa cggcggttca tagacttccg agagttgcgt cttcgggtcg agccggatca
     3661 cgtagcccgg atagccgagc accgagcccc agatcgtgcc gtcgaccggg tttgcgccta
     3721 cgccatagaa accggcattg atgcgcttat ccttggtggg atcgaccggc tggttcggtt
     3781 gcacgtagtc atcgactttg ccattgccgt tggtgtcgat gatgatcggc agccagcctt
     3841 gggcctttgc ctcgtcgccg gtctcttcat atactttgcg gttcagccag ccgatgacgc
     3901 cctgttgcgg gccgccggcg ctggtccaca aagtattgtc ggcgtcttcc gcaaacacga
     3961 ggtggtgggt attaaagcag gtccggatca gcttggtgtt gccggtcttc gggtcataga
     4021 aggccaagtg tcgtgtcgat tgcttgatcg ggaacgcttt ggcagacgga tgatccgagc
     4081 cggcctggca gaatgccggg ttctctggtt tgccgacgcg cgacgtaaac cacacgtcgc
     4141 cacgctcatc catcatggga ttatgcatgc tgttgtggct gtcccagatc gcttcctcgc
     4201 cccaataggg cgaaggtgcc atggtgttgt tcttggtcgt ctccatgtcg gcgtcgcgca
     4261 ccggcatctt gaccatgctg gcacggttgg cctgcgaatc caggatcggg aaatagtcgg
     4321 tgctctcctc ggtggcgcca tagttcctgc cgaaggcatt gacagtcggc tttcgcttgt
     4381 cggtcgagac ctggtcgtgc agataggcct tggggtcggc ccagtcccat tgggtaatca
     4441 cgacgttacg ctcgatccct tgcgggcgat ccggcttggc aaacggcagt tcgccggccg
     4501 cgatccggtc ggtccagttg gcgaagttgg cgagcgacac cttagtgtcc tgcctgccca
     4561 acgccgcggc catattcacc atcgcctgcc cggattggac gcgacgttcc caggcctcga
     4621 ccgaggtctt gaatgtgccg agccccgatg ggatcgcgcg cgtcgccttg ttgccgagct
     4681 ggtggcagcc atagcaaccg ttggtcttaa cctggtcgag ccactgcagc tgactcttca
     4741 tcgtggtggc cataccgttg ccgttcggcc cggtaccggg gaacatctcc ttgccgggta
     4801 tgttgagcat cgcgtaccag taaatggccg gataatattc cgctgcggct gcggcattcg
     4861 ctgccggcac cgccgtaatg ttgacgatct tgccgggctc gctcgtggtc ttagcggaat
     4921 ccaccaagcc atagccgcgt gaccagacga cgtaattggc cttcggcaga tcgggaatca
     4981 cgtagcgccc ttggtcgtcg gtcaccacga tcttgctcat ccgggtcggc agatcggtgg
     5041 tctccgcaat cacccacacg ccggcttccg gcccattcgg cccacgcacg acgccgccga
     5101 tatcggttgc cgcgatactt accgcgggag cgtcttgttg cgcgctgacg ggtgtcgatg
     5161 cgaccccaag cccaagcgca agcccaagcg caaccgccgc cacgcctaag tgcaattcgc
     5221 gttttgctgc catgtgaatc ctccaagtgc tgcatttctg ggcaaatgca accgaaatca
     5281 tgtccgatcc atgtgaaacc ggtggttcgg ttgtcggttc ttttttggat cgtatagacg
     5341 cataatttcg gcggttttgc aaagagatgg gcgccgcccg gtgccgcgca cgggacgccg
     5401 aagggcggca cggacgatct gcgccgcgac ggtgccgcac atcttcgtcc gactgtttgg
     5461 atctgcagga gcccagcgaa tacagcgcgt aaagcggaaa gcccggatcg gacgcgccga
     5521 ttgggcgctt ctttattgtg aatggttcct tagtcccgcg gcgaaagcct tattgtgcgc
     5581 agtctgtgga ccttgattgg agcaagcttt cgcttgaatt gatccaaacc aagagtttct
     5641 gaaccgccta tacacatcct atcgtagcct tcattgagca attgatgcgc aatacagtaa
     5701 tataaatact cggaaagtcc tctttcgtga gagcagggca gcgccgcgat gcacggaacg
     5761 atacccccat ttcccgggcg ttcccacagg ctgaatgcaa cataagcgcc ctttcttttt
     5821 agaatcaatc catcgatttc aagcgtaaag tcgagctcag ctaaagcccg gtaagggtct
     5881 ttcaaatcgg ccagcgagat acctaaattc tgaggtgaat tgttgctctt caattttgtt
     5941 tgaatccagc ttatgttaac gtggttcacg gcattccgcc attctcgctg atcgaaagct
     6001 ttcggctcga caacttctat gccttgatca caaaactttc tgactttctt cctgtaggtc
     6061 ttaaggttgc tttcgctggg gcccacgaga cgcttcaagc agacatcata ggatggatag
     6121 gcccaatcca acttcacttc atctatgatt tttagcttgt aatctatgct gttatgtcca
     6181 acctctttct ttgcgatttc cgtcgcgatc gattcaggta tgcgagctag aaggacttcc
     6241 tgaaatctgt tcaaaaagga cttgcaattg catagtgctt gaacttgctc ggtaagatcg
     6301 actaggtcag aaataaacgg gaaaaataca agcaggattc caatcgcatt aggatggcgc
     6361 accaaaacca aatagttgtc gccatgtttt atagtccaga ccgtgcccct accggtgaat
     6421 gcgaaataca acgctgagtg acaatataca tctccgctac gacttcgtga aagaatatca
     6481 cgcagtttgc caaaatcgtt gatctcattt ggagtatcac tatcgttttg agctggcgtc
     6541 gcagaatcca ggttatagag cggtgtattg tctttcataa gttgtccccc tctattcccc
     6601 cttgtgtgtt ccatatttga taaaacatgg aacgcagagc agtggcaatc ggttggcttt
     6661 caatcgtgat tacaacttct tttggactcc aatgcaccac cgcaatctta tcaccgtaga
     6721 tgtgaatcgg gctttgagaa ggatcaagtt ccgacaggcg tcggtacgat gaacgcggcg
     6781 ccacaaaggt tcgggtattc ggcccgcaca agatcttctc atgtaatcca gcctgcttaa
     6841 gtcgctccat gtgatccgta agatagtcac ccaccgattt ttgggcatct tcttcctgta
     6901 agccgaaaat aaggatgtcg ccatggcctg tcctgtcttt gaattgagac gacacatggt
     6961 agatgtcctc aagaagtctc ctattcgcat cgggcaggtc gtcctgggaa atcatcggat
     7021 ggcggatccg cacgccgtcc tgcgacaaga attcgacctg attgttttca agaaccgtgc
     7081 gtattcggtt gaaaatatcg acggttggat tggctccttc tttctcgagt gccgcaactg
     7141 tgcttcgggc aagtccggcc gacttagcaa ggtcggcctg cgtccacccg atcaagccgc
     7201 gcgcagcccg aatctgacga gatgtaataa ggaaggtcgc cacggcgcat ccgattcaat
     7261 cggctaggaa gtaacgccac accatttgga cggctgggaa gtagaaaagt gtcagcgcgt
     7321 tagcatattg acgcccaagg ggcaacaaat atctggacgc cgcgtaaatt tctgttaata
     7381 tgtttttgcg gctacggccg atcatcgtag ctcagtcgac aaaaagggga ggtgtctgga
     7441 ccgaaagaaa tggtcaaaag gtgcagcttg gttgcaccgg tagagggcaa acgggctgca
     7501 ggaaaaggcg gacagcgtcg ataatgccct gcagagcaac atgctctccg cctctccgat
     7561 ggtgaggctt agagttggtt ggtcgccctg aggcgcacca aaaacctcac gagtgtgacg
     7621 tttgcacgac ggaggtcctc aagaggtgtt tggatgcgat gacgggcaag acccggaggg
     7681 ggtcaatgtc tgtcaatcca tgttccgcat ggcttttgag actggttgcc cggcaatttt
     7741 tgcgacgact tgaggccgat ggtgcgattg tgaccgtcaa caccccggtc atggcatatc
     7801 agaagaaagc tgttgctacc ggtcgttgcc tgtcggtgcc tctgtcggta ggctttgttg
     7861 ttctgctgtc ggccgccgtg ctgcttgctt attttgcggt agaacccgca aatgcccgac
     7921 aagacttctc atttcacgta gcccgactaa gtccgtcgga ttggccgacg aaaggaccgc
     7981 gtcctttccg aaaacggctc gatgccgcgc ccggcggcaa cggggagtgc gatcgaaagg
     8041 cggatccgcg gcggcccctt tgccaattcg gcaacgacgt ggcgacactg ccggattctg
     8101 cgacatcttg ggccagcgtg agacccctcg agacggagcc ggtcagaaac atcgacggtt
     8161 ccaattcatc aacttcgatg gtccgttcga ctcttttggc tccctcaaat ccgacaattg
     8221 tctcgccttc gtcgccgacg agtgggttgt catctcagtt gccatcgttt cagggatgga
     8281 cctggttcat cgtggccgcc attcttaccc tcggcgcacc atttgctgtc gtcttatgct
     8341 tcttcggact ggcggcggtc ctggttggct gcatctcgtt gtgctttgat ctgagctggc
     8401 agttgcagct catcgcattt gcggtgttgg ggattatttc ggcgttgctg tggcagcgac
     8461 tagaccgatt attgagcgac aggaacgacc ttattggccg ttgtccgcac gccttggtcg
     8521 ggcgtgtgtt caggctgcag tcgcccatcg tggatgggat tggggcggta acaatcggcg
     8581 gcaccctatg gcgcgtcgcg ggcagaaact gtgcggcggg cgagcaagta aaagtggtcg
     8641 atgcagaagg gacgctgctt atcgtcgacc cgctggaggc ttgaacgcgc agggacgaac
     8701 aaccattaca acacgaatgc ccggcaactg gccgggcatt cggttagaat tgggccgggt
     8761 caagtcggac ccgccccaaa atcgtcgggc tcagtgcgcc aatgggtccg gccgaacctg
     8821 gaacttgaca atcttcggca gcgtgccttt gccggtttcg cgatggaacg gcgtccgatt
     8881 gccgtcggtg gtccacaggc cgcggccttt ccagccggca ttcggatcgt cgatgcggcc
     8941 gtcgatccac ttggcgaaga agccgagcgg ataggggacg accatgttga cccacttgcc
     9001 gtctaccagc gccatcagcg attcgttggc gttaccggtc gccagcggaa cgttattgcc
     9061 gaggccggcg gtgttttgct ggtcgaccca ggtatagtag ctcgcctcgg cgctgccgct
     9121 ttcggcgatg tcgcggaact gcgggcccgg gaatggggtc agcgtccagc cttcaggaca
     9181 cagcttgcct tcagcggcct gcgggccgtt gagtgggccc ttgcacttgc ggcggtcgaa
     9241 ggcgccgagg tgaccgcttg agagcggcac ataggcgacg ccgttgcggt cgatgtcgaa
     9301 gccgcgtggc ccgaagcccg ggaacggcgg ctcgtagatt tccgacagct tggtcgtcgg
     9361 atcaaaccga agcacgtagc cgggatatcc gagcacggag ccccagactg tgccgtccgc
     9421 gggattcaca ccgacgccat aaagcccggc gttgatacgc ttgtccttag tgggatcaac
     9481 gggttggttc ggttgcacgt actcgtcgac cttgccgttg ccgttggtgt cgatgacgat
     9541 cggggcccag ccctgggctt tcgcctcgtc gccggtctct tcgtagattc ggcggttcag
     9601 ccagcccatt acgccctgct gcggtccgcc ttggctgatc caaaccgtgt tatcggcatc
     9661 ctccgccaac accacgtgat gggtgttgta gcaggtccgg atcagcttgg tggtattggt
     9721 cttgggatcg aacactgaaa ggtgccgtgt cgattccttg atcgggaaag ccttggccga
     9781 cgggtgatcc gacccggcct ggcagaacgc cgggttctcc ggcttgccga cgcgggaggt
     9841 gaaccagaca tcgccgcgct cgtccatgat gaggctgtgg atgctggtcc ttgcgtccca
     9901 gatcgcttca tcaccccaat agggcgacgg cgccatcgtg ttgttcttgc tcgattcggt
     9961 gctggggtca cgtataggca tcgtaacctt ggtgggcgta ttggtcttcg aatcgaacac
    10021 cgggaaccac tcagcgctct cctcggttgc gccataatgc ctgccaaagg ggttgaccgt
    10081 cggcttgcgc ttgtcggtgg aaacttggtc gtgcaagtac gacttagcat caccccaatc
    10141 ccattgggtg atcacgacgt tacgctcgat gccctgcgga cgcgcgggct tcgcgaaagg
    10201 cagttcgccc gctgcaatcc ggtcggtcca gttggcgaga tttccaattg aaagcttggg
    10261 ctcttgtcgt cccaaggcgg cggccatttg caccatcgcc tgtccggatt ggacgcgccg
    10321 ttcccaggcc tcgaccgaat tcttgaacgt gccgagttcc ttcgggatca cgcgggtcgc
    10381 ccggttgccg agctggtgac acgcatagca gccattggtc ttgacctggt cggcccactg
    10441 aagctggctc ttcatcgcgg tcggaatgcc gttgccattc gccccggtgc cggtgcccgg
    10501 gaacttgctc ttttccggga tgtgaagcat ggcgaaccaa tagattgcgg gataaagttc
    10561 ggccgccgcc gcttcatttg gtgccggcac cgcggtgatg ttcacgatct tgccgggttc
    10621 agtggtcgtc ttagcggaat cgacaaggcc gtagccgcgc gcccacacga tgtaattggc
    10681 cttaggcaga tccggcacca catagcgacc ctgatcgtcg gtcaccacgg tcttactcat
    10741 cttggtcgga agatcggtgg tttccgcaat gacccacacg cccgcttccg gtccattcgg
    10801 accctgcacc accccaccga tatccgtcgc cccaatgctg accggggcag cctgctgcgc
    10861 catgacggtc gtcggcaccg cgccgaacgc cagggcaata gcgatcgccg ccacgcctaa
    10921 atacatactg tttcgtgtct tcatgtcttc tcctccactc tcggtttccg agattacgtc
    10981 ggcaatgcca aaaccggtcg tcgaggacga ccgccggcgg gcttcgttct tttgcggtat
    11041 aatgcgcata tttcagagtc gtt
//
LOCUS       DATILV010000183         2270 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3364830, whole genome shotgun sequence.
ACCESSION   DATILV010000183 DATILV010000000
VERSION     DATILV010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2270
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3364830"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(272..2041)
                     /locus_tag="VLJ17_04205"
     CDS             complement(272..2041)
                     /locus_tag="VLJ17_04205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HSV22213.1"
                     /translation="MYLRCNRRRKDGKEHCYWNIVESKRCAGGKVVQRNVLYLGEIND
                     SQREAWCQVIEAFDEGTKQPTQLALFPAERAVPEHARAYGVQVRLNEMQLHHPRQWGA
                     CWLACVLYELLGLNEFWASRLPDSREGTCWRQILQTLVCYRLIDPGSEWRLHRLWFEQ
                     SAMGDLLGADDALVEKNGLYRCLDRLLPHKAELFNHLRERWQDLFGARFDVLLYDLTS
                     TYFESDPPADATDKRRYGYSRDKRSDCVQVVIALIVTPEGFPLGYEVLPGNTADNTTL
                     RSFLQKIEIQYGKAQRIWIMDRGIPTEDVLAEMRQADPPVSYLVGTPKGRLAKLEQAL
                     VGLPWHAVRDGVAVKLLPQDQDLYVLAQSRTRIHKERAMRRRQLKRLWARLKRLSGMR
                     LKREALLMKLGAARANAPAAWRLIDITLAPKGGNFTFALDRQKLREVRRREGRYLLRT
                     NLRGQDPAQLWQFYIQLVEIEAAFKNLKDDLGLRPIYHQLEERIEAHIFVAFMAYCLH
                     VTLRARLKLLAGGLTPRAVLDKLSAIQMLDVHFPTTDGRTLILSRRTELTSDQKLIVR
                     QLKLTLPPQPPPRITTAGRLASA"
BASE COUNT          437 a          662 c          699 g          472 t
ORIGIN      
        1 gccgatgaaa ttcatgtcga aagtgtagac gtcggccgtc atgccgtcgg tcgaggtcac
       61 gggtatgcat ccggtgaagg ccgctgggta gtccggtttt gggcgggtgg cggattgttc
      121 gctcacgcag cttcagtgcc gactctcgtt cttgccgcct ttgagtctgt acagcgtggg
      181 caaaggctaa cccgactttc tcaactggag ggtttgaggc tgataaaagc ccataaagcg
      241 gggcttcgga ttaaaaggtc tccactacat ctcatgcgct ggcgaggcgg ccggcggtgg
      301 tgatccgtgg cgggggttgc ggtggcagcg tgagcttgag ctggcgcacg atgagctttt
      361 gatcgctggt gagctcggtg cggcgactaa ggatcaaggt gcggccgtcg gtcgtgggga
      421 agtgaacgtc gagcatctgg atcgccgaga gcttgtcgag caccgcccga ggggttaagc
      481 cgccggcgag caacttgagc ctcgcgcgca gcgtcacgtg caggcaataa gccatgaagg
      541 cgacgaagat gtgcgcttcg atgcgttctt ccagttggtg gtagatcggg cgcaagccga
      601 gatcgtcctt gagattcttg aaggcggcct cgatctcgac cagctggata tagaactgcc
      661 acagctgggc cgggtcttgt ccacgcaggt tggtgcgcag caggtagcgt ccttcccgcc
      721 gccggacctc tcgcagcttt tgccgatcga gcgcaaaggt gaagttgcca ccctttggcg
      781 ccagcgtgat gtcgatcagg cgccaggcgg ctggcgcatt ggcgcgtgcg gcaccaagct
      841 tcatcagcaa ggcttcgcgc ttgagccgca tgccggagag ccgtttgagc cgcgcccaca
      901 gccgcttcaa ctggcgtcgg cgcatggcgc gttccttgtg aatgcgcgtg cggctctggg
      961 ccagaacata gagatcctga tcctgcggca agagcttcac cgcgacaccg tcacgcacgg
     1021 catgccaggg caatccgacg agcgcctgtt ccagtttggc gagccgcccc ttgggggtgc
     1081 caacgagata tgagacaggc ggatcggctt gccgcatctc ggccagcacg tcttcggtcg
     1141 gaatgccgcg atccatgatc cagatgcgct gcgccttgcc gtattggatt tcgatctttt
     1201 gcaggaacga gcgcagcgtc gtgttgtctg ccgtgtttcc cggcaggacc tcataaccca
     1261 gcggaaaacc ctccggcgtc acgatcagcg cgataacgac ttgcacgcag tcgctgcgct
     1321 tgtcgcggct gtagccgtac cggcgcttgt ccgttgcatc ggccggcgga tcggattcga
     1381 aataggtgct ggtgaggtca tagagcagga catcgaagcg tgccccgaac aggtcctgcc
     1441 agcgttcgcg caaatgattg aacagctccg ccttgtgggg caacagccgg tcgaggcaac
     1501 ggtaaagccc attcttctcg accagcgcgt cgtcggcgcc gagaagatca cccatcgcgc
     1561 tctgctcaaa ccagagccgg tgcagtcgcc actcgctgcc aggatcaatc agccgatagc
     1621 acacaagtgt ctgcaggatt tgacgccaac atgtgccttc ccgagaatcc ggcaagcggc
     1681 ttgcccagaa ttcattcagt ccaagcagct catacagaac gcatgccaac caacacgcgc
     1741 cccactgacg cggatgatgc agttgcatct cgttgagccg cacctgcacg ccatacgctc
     1801 tggcatgctc cggcaccgct cgttcagcgg gaaacagcgc caactgcgtg ggctgtttcg
     1861 ttccttcatc gaacgcttcg ataacctgac accacgcctc gcgctggctg tcatttatct
     1921 cgccaaggta cagcacgttg cgctgcacca ccttgccgcc agcacaacgc ttgctctcga
     1981 caatattcca atagcagtgt tctttgccgt ccttgcgccg tcggttgcat ctcaaataca
     2041 tgcccgctga tgcaacgaga atcagtcctt tgaaaagggg cttggtctac actacagacg
     2101 ctttgaattt gtcagccctt gttttgactc gcgtttcttg tcgccagagg tcaaaaattg
     2161 gcgatttccg gatccagttg agaagaccgg gctaggctgc tgtgcggcga gacgacgtgt
     2221 cattgagatg cggcggaatg aaggtgacgc tcgacaagag gaatgcgtgg
//
LOCUS       DATILV010000184         3278 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4130854, whole genome shotgun sequence.
ACCESSION   DATILV010000184 DATILV010000000
VERSION     DATILV010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3278
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4130854"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..520
                     /locus_tag="VLJ17_04210"
     CDS             <1..520
                     /locus_tag="VLJ17_04210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV22214.1"
                     /translation="AVARLIDKTHADVVLADSPPVDQLTEWRARHNATAFIVMVDDPS
                     EDGLGALYAGADAILPRSADDRDIAAAIQAVKSGLAVMSRHLLDTLIGAGSPDVPRRN
                     AGEAHAPLTPRELEVLASMADGASNKTIARRLGISFHTVKFHVAAILVKLDADSRTEA
                     VAKAAQLGLVML"
     gene            563..685
                     /locus_tag="VLJ17_04215"
                     /pseudo
     CDS             563..685
                     /locus_tag="VLJ17_04215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012384276.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ArsR family transcriptional regulator"
     gene            735..1613
                     /locus_tag="VLJ17_04220"
     CDS             735..1613
                     /locus_tag="VLJ17_04220"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008839735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSV22215.1"
                     /translation="MSDAQVVAAQPRSQYVEFWNNILVPKFVRWRHILVGGLTLHSER
                     IFPSLLVNMGDKVIDAGCGFGDTAIELARLVGPTGSVLAVDCCEGFLEYGRRDARAVG
                     VNNVTFLEADVQTYPFQPVYDFCFSRFGTQFFENPVAGLRNMRSSLKPGGLMTMVVWR
                     GIKDNPWLGHAKDVVLKFLPPPGENAQTCGPGPFSMADTGVVTKQLEIAGYRDIKFEQ
                     VDAQVFVGRDLDDAAAFQLAIGPAGEVYREAGKLAEQRHDEIAGALKSELAKYQRSNG
                     VMMDSSSWKVTARNPS"
     gene            complement(1967..>3278)
                     /locus_tag="VLJ17_04225"
     CDS             complement(1967..>3278)
                     /locus_tag="VLJ17_04225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007800318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="arylsulfatase"
                     /protein_id="HSV22216.1"
                     /translation="FAELVPFNGINPSVAENLKFYDAWGSNETYPHYAIAWAWAFDTP
                     FKWTKQIPSFFGGTRNGMAISWPAKISDKGGIRTQFHHVIDVVPTILEATGIPAPVMV
                     DGIAQKPIEGVSMAYTFDKANAATPSRHRTQYFEMMGVQGLYNHGWMLSAVPIRPPWE
                     LAGKAVDDPATAFKMELYDVRGDWTQSTDVAAANPNKVREMRDLMFGEFAKYQVLPLD
                     ASAATRLASARPSVTAGRKVFTYSTPITGLPDSVAPQLLNTSYTITADIDVPQGGGEG
                     SIVSEGGRFGGYGMYLLKGKPVFTWNLLGLDRVRWESPQALSPGKHTIVFDFKYDGLG
                     FATLAFNNMSGIGRAGTGTLMVDGKPVATRTMERTVPLILPVDETFDVGSKTGTPVDD
                     RDYQTPFTFTGKINKLTVSVEPPKLTPQDEKKLSEALRAAQDAK"
BASE COUNT          626 a          992 c          996 g          664 t
ORIGIN      
        1 ggccgtggcg cgattgatcg acaagaccca cgccgacgtc gtgctggctg actcaccgcc
       61 agtggatcag ctgaccgaat ggcgtgcgcg gcacaacgca acggccttca tcgtcatggt
      121 cgacgacccc agcgaggacg gcctcggcgc gctctacgcc ggcgccgacg cgatcctgcc
      181 gcgctcggcg gacgaccgtg acattgcggc agccattcag gcggtcaagt ccggtcttgc
      241 cgtcatgtcg cgtcacctgc tcgatacgct gattggcgca ggttcaccgg atgtgccgcg
      301 ccggaatgct ggcgaggccc acgcgccact cacgccccgc gagctcgaag tgctcgcgtc
      361 gatggccgac ggcgcgtcca acaagacgat cgcgcgacgg ctcggaatat cattccacac
      421 cgtcaagttt cacgtcgctg ccattctggt gaaactcgat gctgacagcc gcaccgaagc
      481 ggtcgccaag gccgcgcaac tcggtctcgt gatgctgtga tcggggcgcg cctcgcgata
      541 ggtggagctt gcgaaactca tctgtgtgct gtcctatgaa gcggtcgctg ctctgcgtcg
      601 actaggcttc aaggctcgcc ggttggagga cggcttaccg gaatggcggg cagcatggct
      661 gccggtggtc actggtggcg cataggccat caatagacat ttgtcttccc ctgaatcaac
      721 ctatgagggc taccatgagt gatgcacagg tcgtcgcggc gcagccaaga agccaatatg
      781 tggaattttg gaacaatatt ctggtgccaa aattcgtgcg ttggcggcac atcctcgtgg
      841 gcgggctgac tctccatagc gaaagaattt ttccctcgtt gctggtgaac atgggcgaca
      901 aggtgatcga tgccggctgc ggctttgggg atacggcgat tgaattggcc cgtttggttg
      961 ggccgaccgg gtcggtgctc gcggtagact gctgcgaagg ctttctcgaa tacgggcggc
     1021 gcgatgcgcg cgccgtaggt gttaacaacg tcacgttcct cgaagctgat gtgcaaacct
     1081 atccgttcca gccggtgtat gacttctgct tttcccgctt cggcacccag tttttcgaaa
     1141 atccggtcgc tgggttgcgc aacatgcgct caagtctcaa gcccggcggg ctcatgacaa
     1201 tggtcgtctg gcgcggcatc aaggacaatc catggcttgg tcatgccaaa gacgtcgtgc
     1261 tgaagttctt gccgcctccg ggtgaaaacg cgcagacgtg tggaccgggg ccgttttcca
     1321 tggccgacac gggtgtcgtc acgaaacagc tcgaaattgc cggctaccga gacataaaat
     1381 tcgagcaggt ggacgcgcaa gtatttgtcg gcagggacct cgacgacgcg gcagccttcc
     1441 agcttgcaat cggacccgcg ggcgaggtgt atcgggaggc cggcaagctc gcggagcagc
     1501 gccatgacga gattgcaggc gcgctcaaat cggaacttgc aaaatatcag cgttcgaatg
     1561 gagtaatgat ggattccagc tcatggaagg tgacggctag aaatccatcg taggtaccta
     1621 tctcgcgctc gctctcttcg ctggttctca accggccgca gcagcactcg cccaaacatc
     1681 caagtgtcgg accaattcgc gcagcaatct tcgtcgttcg acccgcacag ccacctgctc
     1741 attgccgcat cgccgtctgt caatcggttg caccgcgctg ccctctatca cgcgtagcat
     1801 ccgccgcgct caaatcccca cagcgctcgc cgcaccgccg cagcccatct ctcgcggttt
     1861 cgtcccttgg aggttttcgt acgccggctc caggagtacg tgcgcgcccg cgcatgggcc
     1921 ggcatccgaa aaccttcaca acagcggaca cggcactatc tgccgatcat ttcgcgtcct
     1981 gggccgcgcg caaagcctcc gagagcttct tctcgtcctg cggcgtcagc ttgggcggct
     2041 cgacggagac tgtcagtttg ttgatcttgc cggtgaacgt aaaaggcgtt tggtaatcgc
     2101 ggtcatccac cggtgtgccg gttttcgagc cgacgtcgaa ggtttcgtcg actggcagga
     2161 ttaacgggac ggtgcgctcc atggttcgcg ttgcgaccgg cttgccgtcc accattagag
     2221 ttccggtacc ggcacggccg atgccgctca tgttgttgaa ggcaagggta gcaaaaccga
     2281 ggccgtcgta tttgaagtcg aaaacgatgg tgtgcttccc gggcgaaagc gcttgcgggc
     2341 tttcccagcg gacacgatca agaccgagca ggttccacgt gaagacaggc ttgcccttaa
     2401 ggaggtacat cccatagcca ccgaaccgac caccttccga gacaatcgag ccttcgccgc
     2461 cgccttgcgg cacgtcgatg tcagcggtga tggtgtagga cgtgttgaga agctgcggtg
     2521 ccacgctgtc gggtaagccg gttatcggcg ttgagtaggt aaacaccttc cgtcctgccg
     2581 tcacagaagg ccgcgcggaa gccaaacgag tcgcagccga agcatccagc ggcagcacct
     2641 gatacttggc gaactcgcca aacatcagat ccctcatctc gcgcaccttg tttggattgg
     2701 ctgcggccac gtcggtggac tgcgtccagt caccccggac atcgtacagc tccatcttga
     2761 acgcagtggc cgggtcatcg accgccttac ccgccagctc ccaaggcgga cggatcggca
     2821 ccgcgctcag catccagccg tggttataga gaccctgaac acccatcatc tcgaaatatt
     2881 gggtgcggtg tcgcgatggg gtggcggcat tggccttatc gaaggtgtag gccatgctga
     2941 cgccttcaat cggcttctgc gcgatgccgt cgaccatgac gggcgcggga ataccagttg
     3001 cctccaggat cgtcggcacg acgtcgatca catgatggaa ctgggtgcgg ataccgccct
     3061 tgtcgctgat ctttgccggc caggagatcg ccatgccgtt gcgcgtgccg ccgaagaacg
     3121 aggggatctg cttggtccat ttgaacggcg tgtcgaacgc ccaggcccag gcaatcgcgt
     3181 agtgtggata ggtttcgtta ctgccccaag cgtcgtagaa cttcagattc tcggcaaccg
     3241 acggattaat cccgttgaat ggtacgagct cggcgaac
//
LOCUS       DATILV010000185         1555 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2088572, whole genome shotgun sequence.
ACCESSION   DATILV010000185 DATILV010000000
VERSION     DATILV010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1555)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1555)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1555
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2088572"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(143..>1555)
                     /locus_tag="VLJ17_04230"
     CDS             complement(143..>1555)
                     /locus_tag="VLJ17_04230"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HSV22217.1"
                     /translation="TYEVRNPATGAVVDTAPKGNEKDVLQAIQAAETAFKEWSDVTAE
                     DRGNALMSACELIKKNSGEIAQLLTQEQGKTLFEAGLEIHHLVHGLEFYAGLASKVRG
                     AHVPLPQKGAYGMVVRQPIGICGGIVPWNFPLTLMGTKLGPALAAGNTIIIKPASTTP
                     LATVRAIELIQQATFGEGKAQKQMTKGAVNVVTGPGSTVGEEILRNPRIRRIAFTGST
                     PVGRHVMEVAGREIKRVTLELGGSDPMIVMEDANLDMAVKMADIGRFFNCGQMCLGVK
                     RLFLHESVAEKFVGGLVEILKKKTVGNGMSKETRMGPIHIESQRQEVEEQVEDAKSRG
                     AKTIFGGERAKGGDLDKGYFYLPTLLSDVPDDARVTKEEVFGPALPVYTFKTIDEAIE
                     KSNASEFGLGSSIWTRNLVYANKAIDKLQAGNVWVNSLHYGYDELPFGGVKSSGVGRE
                     HGPEALDYYLEPKGVVIVNV"
BASE COUNT          299 a          449 c          457 g          350 t
ORIGIN      
        1 gcggttctac cagtgtcgcg gtgcggacgc agtagccctt cgacatgcaa acgttgagaa
       61 ctgttcaccg cagaggcgcc gagttcacag agatcggaat atttctgcgg ttggccacac
      121 gaaatcctga ggacctaaga atttaaacgt tgacgataac gacgcccttg ggctcgagat
      181 agtagtcaag ggcttcggga ccgtgctcgc ggccgacgcc gctggacttc acgccgccga
      241 agggcagctc atcgtagcca tagtgaagtg agttcaccca gacattgcca gcctggagct
      301 tgtcgattgc tttgttagcg tagactaaat tgcgcgtcca gattgaagag ccgaggccaa
      361 attctgaagc attggatttt tcgatggcct catcgatagt cttgaacgtg tagacaggca
      421 gcgccggacc aaaaacctct tccttggtga cacgggcatc gtcgggaacg tcgctgagca
      481 atgttggcag atagaaatag cccttgtcga ggtcgccgcc cttggcccgc tcgccaccga
      541 aaatcgtctt ggcgccgcgg gacttggcat cctccacctg ctcttcgact tcttgccgtt
      601 gggactcgat atggatcggg cccatgcggg tttctttgct catgccgttg ccaacggttt
      661 tcttcttgag aatttccacc aggccgccga cgaacttctc ggcgacggat tcatggagga
      721 acaggcgttt gacgccaaga cacatttgac cgcagttaaa gaaccggccg atgtcggcca
      781 tcttcacggc catatccaga ttggcgtctt ccatgacgat catcggatcg ctgccgccaa
      841 gctctagagt aacgcgtttg atctcacggc ccgcgacttc catgacgtga cgcccgacgg
      901 gagtcgagcc ggtgaaggcg atgcggcgaa tccgcggatt gcgcaggatc tcttctccca
      961 cggtgctgcc cgggccggtg accacgttga ccgcgccctt ggtcatttgc ttttgggctt
     1021 tgccttcacc aaacgtcgcc tgctggatca attcgatggc gcggacggtt gcgaggggag
     1081 tggtactggc cggcttgatg atgatcgtgt tgccggcggc caatgcgggc cccaacttgg
     1141 tgcccatcag ggtcaaggga aaattccagg gcacgatccc gccgcagatg ccgatgggct
     1201 gccgcacgac catgccgtag gcaccttttt gcggcagcgg cacgtgagcg ccgcggactt
     1261 tcgaggcgag cccggcataa aattccaggc cgtgaaccag gtggtgaatt tccaaaccgg
     1321 cttcaaacag agtcttgccc tgctcttggg tcagtagttg ggcgatctcg ccgctgttct
     1381 ttttgatcaa ctcgcaggcg ctcatgagcg cgttgccgcg atcttcggcg gtgacatcgg
     1441 accattcctt gaaagcggtc tctgccgcct ggatcgcttg cagaacgtct ttctcgttgc
     1501 ccttaggagc cgtgtccact acggcacccg tcgccggatt gcggacttcg taagt
//
LOCUS       DATILV010000186         1680 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2853201, whole genome shotgun sequence.
ACCESSION   DATILV010000186 DATILV010000000
VERSION     DATILV010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1680)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1680)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1680
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2853201"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            305..1254
                     /locus_tag="VLJ17_04235"
     CDS             join(305..641,641..1254)
                     /locus_tag="VLJ17_04235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012605261.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HSV22218.1"
                     /translation="MGKPYSQDLRERVIAAVDRGTGAYVAALLFQVSVSYIYKALIRR
                     RKTGEVTARRSGCGPKPKLAPHDDALRARVAAEPDITLAELQAWLLAERKVDVSIGCL
                     WNRLKFLKLPPQKKSERAAEQDRSDVAQARDEWRASQSELNPERLVFIDETGAATDMA
                     RRYGRCPRGQRLVSSVPWGHWKTTTFVAALRVGEIAAPCVFDGPMDGPSFRAYVEQFV
                     VPILRLGDIVVMDNLPSHKVAGIREAIEAAGAELRYLPSYSPDFNPIEQFFAKLKALL
                     RKVAARTIEALIAAIAEALTKVSPQECENYLANQGYRRQL"
BASE COUNT          340 a          498 c          504 g          338 t
ORIGIN      
        1 aggcttcgcg gcccaagtaa ttgtcgacgg gcagataccc tttggctgca ccgctgcgat
       61 ccaattttgg attcgaggct gatgggtcat tttcgaccga tcgacggtgt ctgcgcgatg
      121 tccgctttca tccgatatct accaaattgc tgcattacag caaccgccgt tttggaccaa
      181 cagcggagga ggaaagtcgt cgataccact gctagagcgt tttcagggtt gacggaatcg
      241 gcggttttct cgctgtgctg gatttgtgat tcaaccttcg tgtcgaatcg acacggaggc
      301 tgtgatgggc aagccatatt ctcaggactt gcgtgagcgt gtgattgcgg cagttgatag
      361 gggaactggc gcttatgtgg ccgcgctact gtttcaggtc agcgtctcct atatttacaa
      421 ggctctgatc cggcggcgga agaccggcga agtgaccgcg cgccggtccg gctgcggtcc
      481 gaaaccaaag ctggcgccgc acgatgatgc ccttcgtgca cgcgttgcgg ccgagcccga
      541 catcacgctc gccgaactgc aggcttggct actcgccgag cgcaaggtcg atgtcagcat
      601 cgggtgcctg tggaacaggc tcaagtttct caaactcccg ctcaaaaaaa gtcggagcga
      661 gccgccgagc aggatcgctc agatgtggcc caagcgcgtg atgagtggcg tgcgagccag
      721 agcgaactga acccggaacg cctggttttc atcgacgaga ctggcgcagc gaccgacatg
      781 gcgcgtcgct atggccgctg cccgcgcggt caacgcctgg tgtccagcgt accgtgggga
      841 cactggaaga ccacgacatt cgtcgccgcg ctgcgtgtcg gcgagatcgc cgcgccttgt
      901 gtgttcgacg gaccgatgga tgggccgagc tttcgcgcct atgtcgagca gttcgtggtc
      961 ccgatcctgc gcctgggcga tatcgttgtg atggacaatc tccccagcca caaagtcgcc
     1021 ggcatccgcg aagccatcga ggccgccggc gccgagctgc gctacttgcc ctcgtacagc
     1081 ccagacttca accccatcga acagttcttc gctaaactca aagccctgct gcgaaaggtc
     1141 gccgccagaa ccatcgaagc gctcatcgca gcaatcgccg aagccctcac caaagtcagt
     1201 ccgcaagagt gcgaaaacta ccttgcgaac caaggctatc gccgccaatt atgaaaatgc
     1261 tctagtcgtc gttttgcgac ggccgctgag gcaattcgct tcgcggttga ggattttccc
     1321 gcaattcgct cccttggcgc ttggatgcag gtcagaaatg agcgcttcga cggcgaagac
     1381 atccatcgcc tctacgagag ccggcttttt cctctacgac gccgactgga ctaagcgctc
     1441 gtctgccggt ggggcttgtc aaactaatag agaatcactg ggtccgactg ggaccgggac
     1501 gaggcgcgac gagcaacccc gagaaccatc ctggacaccc tctctgcggc ggacgatgat
     1561 gttcaacaac agtatgggcg ccgacatgga cgtggcaagc tggctgcgga gcctcggcct
     1621 cgaaaggtat gaggctgcgt ttcgggacaa tgagatcacc gaaaaggtcc tgccccggct
//
LOCUS       DATILV010000187         4357 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2088772, whole genome shotgun sequence.
ACCESSION   DATILV010000187 DATILV010000000
VERSION     DATILV010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4357)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4357)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4357
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2088772"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2314
                     /locus_tag="VLJ17_04240"
     CDS             <1..2314
                     /locus_tag="VLJ17_04240"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSV22219.1"
                     /translation="AAAIGLYQLPGSNAVQASDAVRAFMKEAKQRFPADMDYAISLDQ
                     TDSVREGMREIVKTLVEAILFVVVVVFIFLQGWRATLIPLCAVPVSLVGTFVFFPLFG
                     FSINTLSLFGLILAIGLVVDDAIVVVEAVEHHIEHGMAPREATLLAMRQVSGPVIGVA
                     CVLAAVFIPTVFLPGITGRLYQQFAITIAISVILSAFNALSLSPALSALLLRPRKEAR
                     GPLGWFFRGFNRVFSSVTNGYVSWSRHAIRKSALSLGLLVLFFVGAGWFGGKLPRSFL
                     PEEDQGYVYMALQLPDAASLDRTDEAARKIEDVLSKIPGIKYTTTVVGFSLLSIVQNS
                     YSAFFFVTLEPWEERKKPEEQYEAIKLRINKELSGLTDGIAFAFPPPAIPGVGTSGGF
                     TFLLQDRAGRDIGFLAENLNKFMTAARKRPELAGLFSTFLPNVPQLFVDVDRDKVLKQ
                     GIDISEVYQTLQTFMGGYFVNYFNRFGRTWQTYIEAEGDYRDDPKNVGQFYVRNSNND
                     PVPLDAVATIRNINGPEFTLRFNEYRSAQINGVAAPGYSSSQAMKALEETFQQTMPSE
                     MGFNYMGMSFQEKKAEKGVSSIAVFGLSLVFVFLILAALYESWSLPFSVLLSTPVAVF
                     GAFLTLFLRHMENDVYVQIGLVMLIGLAAKNAILIVEFAKAEYEKGKPLIDAALEGAR
                     LRLRPILMTSFAFICGCLPLWFASGSGAVARRVLGSTVIGGMIAASGIAIFLIPVTFF
                     VVERLSSRGHVTPQAPQPEPQAAPASALPS"
     gene            complement(2394..2645)
                     /locus_tag="VLJ17_04245"
     CDS             complement(2394..2645)
                     /locus_tag="VLJ17_04245"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: protein motif:HMM:NF013296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016832 - aldehyde-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HSV22220.1"
                     /translation="MKLRPKVLKECQDAVVKTYGEAARFYLVFYGGSGSTQEEIHEAL
                     DYGVVKMNVDNDMQYAFTRAVAGQMFKNDDGRVAIKFPE"
     gene            complement(2655..3974)
                     /locus_tag="VLJ17_04250"
     CDS             complement(2655..3974)
                     /locus_tag="VLJ17_04250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003577888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucoamylase family protein"
                     /protein_id="HSV22221.1"
                     /translation="MADTPGVDNDLNRLPTDRDLNLLQLSTVLYYLHETNPDNGLVRD
                     KTDPSAPVSIASCGMALATIPVVIERGVLFRDFAAKITRKRLRYLLECPQGPEPDASG
                     YKGFFYHFLDIETGRRVWQCELSTIDSAFLFAGALTVGAYFDRDTPDEVEIRSLADAL
                     YRRADWNWARDGGPTLTHGWRPENGFIPHRYEGYDEGLLLYILGLGSPTHPLPPESYR
                     AYCATYQWKQIYDRELLYSGPLFTHQLSHMWIDFRGIRDEFMRSRGSDYFENSRQATF
                     VQQEYAIRNPMNFVGYGEHCWGFTACDGPGWAKRVVNGVEREFFDYAARGAPFGPDDG
                     TVAPWVLVASLPFAPEIVIPTVRHFAQMELGMTEKYGFKPSFNQSFALQDSPTGWWVT
                     PYHFGIDQGPIVLMVENYRTGLLWNIMRRCPTVVTGLRRAGFTRGWL"
     gene            complement(3992..>4357)
                     /locus_tag="VLJ17_04255"
     CDS             complement(3992..>4357)
                     /locus_tag="VLJ17_04255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014531862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase family 65 protein"
                     /protein_id="HSV22222.1"
                     /translation="YKVEPYVVCADVYGAPPHTGRGGWTWYTGSASWLYRVAIETILG
                     FRLRGGTLRFEPCVPPRWPGFELSYRHRSATYRILVDNSAGMGRGVKSVELDGQPLSD
                     GNVPLGDDGKTHNVRVRLG"
BASE COUNT          891 a         1240 c         1212 g         1014 t
ORIGIN      
        1 agccgcggcg atcggtctgt atcagctacc cggtagtaat gccgtgcaag cttcggacgc
       61 tgtgcgcgca ttcatgaagg aagcgaagca gcgatttccc gctgacatgg attacgccat
      121 ctcactcgac cagaccgatt ccgtgcgcga agggatgcgc gagattgtta agacattggt
      181 cgaagcgatc ctatttgtgg tggtcgttgt attcatcttt ctacaaggtt ggcgcgcaac
      241 tctgatccca ttgtgcgccg tgcccgtttc gctggttgga acctttgtgt tcttcccgtt
      301 attcggcttc tcgatcaata cgctttcgct tttcggcctg attctagcca taggtctggt
      361 agtcgatgat gccattgtcg tagtcgaagc cgtcgagcat cacatagaac atggcatggc
      421 gccacgcgaa gcgaccttgc tggcaatgcg tcaggtatct ggaccggtca tcggtgtagc
      481 ctgtgtgctt gcggcagtct ttatacctac cgtgtttctt ccggggatca ctgggagatt
      541 ataccagcag tttgccataa ccattgcaat ttcggttatc ctttccgcgt tcaatgcact
      601 gtcgctaagt ccagcgcttt cagcgctctt gcttcggccg cggaaggaag cccgtgggcc
      661 gctcggctgg ttttttcgcg gctttaatcg cgtctttagc agcgtaacta atggttacgt
      721 cagttggtcg cgccacgcta ttcgaaagag tgcgctcagt cttggattgc tcgttctctt
      781 ttttgtcggc gcagggtggt tcggcggtaa gctaccgcgc agctttcttc ccgaagaaga
      841 ccagggctac gtttatatgg cccttcaatt accggacgcc gcttcgctcg accgcacgga
      901 tgaggcagcg cgtaaaatcg aagacgttct gagtaagata ccgggcatca aatatactac
      961 gactgtcgtc gggtttagcc ttctcagcat cgttcagaac agttacagcg cgttcttctt
     1021 cgttaccctg gagccttggg aggagcgtaa aaagccggag gaacaatacg aggcaatcaa
     1081 gttgcggata aacaaggagc tgtccggtct taccgatggt attgcttttg cctttccacc
     1141 acctgctatt cccggcgtcg gcacctccgg cgggtttacg tttcttttgc aagaccgcgc
     1201 cggcagagat atcggctttc ttgccgaaaa tttaaacaag ttcatgacgg cagcgcgaaa
     1261 acgcccggaa cttgcgggac tgttctccac gtttctgccc aacgtgccgc aactctttgt
     1321 ggacgtcgat cgcgacaagg tgctcaagca aggcatcgac ataagtgagg tgtatcaaac
     1381 actacagacc ttcatgggcg gttacttcgt caactacttc aaccggttcg ggcgcacctg
     1441 gcagacctac atcgaagcag aaggcgatta ccgcgatgat cccaagaatg taggtcagtt
     1501 ctatgttcgg aattcgaaca atgaccctgt tccactcgac gccgtggcga cgatcaggaa
     1561 tattaacgga cccgaattca ccttgcgctt caacgagtat cgatccgccc aaatcaacgg
     1621 tgtcgccgcg ccgggctata gctcatcaca agcaatgaag gcgttggaag aaacttttca
     1681 gcaaaccatg ccatctgaaa tgggctttaa ctatatgggc atgtcattcc aggaaaagaa
     1741 agcagagaaa ggtgtttcct ctatcgccgt gttcggctta tcgctcgtct ttgttttcct
     1801 cattctggct gccctctacg aaagctggtc cttgccgttt agcgttctac ttagcacacc
     1861 ggttgcggtg ttcggtgcat ttctaactct ctttctgcgg cacatggaga acgacgttta
     1921 tgtgcagata ggtcttgtta tgctcattgg tctggcggcc aagaatgcga ttttgatcgt
     1981 ggaatttgcc aaggccgaat acgaaaaagg caagccgctc atcgacgctg cgctggaagg
     2041 tgcgcgcctg cgcctgcgac ctatcctgat gacctctttt gccttcatct gtggctgctt
     2101 gccgttgtgg tttgccagtg gctccggagc ggtggcgcgt cgcgttctcg gttcaacagt
     2161 tatcggcgga atgatcgccg cttccggcat cgcgatcttc cttatcccgg taaccttctt
     2221 cgtggtggag cgactctctt cacgcgggca cgtcacccct caagcgccac agccggaacc
     2281 acaggccgct ccggcctcgg cactgccatc atgagtgact ccggcgatgg gtttcgattc
     2341 ctattcgcca caatcacaac tgatgcattg ctcgaagcta tctcacgtct acctcactcg
     2401 ggaaatttta tcgcaacacg cccgtcgtcg ttcttgaaca tctgcccggc gaccgcgcgt
     2461 gtgaatgcgt attgcatgtc gttatcgaca ttcattttca cgacgccgta atcgagcgcc
     2521 tcgtggatct cctcctgcgt cgaacctgag ccgccgtaaa aaacgaggta aaatctcgca
     2581 gcttcgccgt atgttttcac cacggcgtcc tggcattcct tcaaaacttt tggccgcagc
     2641 ttcacgtgac cgggctaaag ccaaccgcgc gtaaatcccg ccctccgcag cccggtgacg
     2701 accgtcgggc aacggcgcat gatgttccac agtaggccgg tccggtagtt ctcgaccatc
     2761 agcacgatcg gtccttgatc gattccgaag tgatacggcg tgacccacca accggtgggg
     2821 ctatcctgca gggcaaaaga ttgattgaac gacggcttga acccatactt ttccgtcatt
     2881 cccaattcca tctgtgcaaa gtgccgaacg gtcgggatga cgatttcagg ggcaaacggt
     2941 agcgaggcga ccagcaccca cggcgcgaca gtgccgtcgt cgggaccgaa tggggcgcct
     3001 cgagcggcat agtcgaaaaa ctcgcgttcg acgccgttga ccacccgctt cgcccaaccg
     3061 ggcccgtcgc aggccgtgaa cccccaacag tgttcgccgt agccgacaaa attcatgggg
     3121 ttgcggatcg cgtattcctg ctgcacaaac gtagcctgcc ggctgttctc gaagtagtcg
     3181 ctgcctcgcg aacgcatgaa ttcgtcgcgg atgccgcgaa agtcgatcca catgtgagag
     3241 agttgatgcg tgaacagcgg ccccgagtaa agcaattcac gatcgtagat ttgcttccac
     3301 tggtaggtcg cgcaataggc gcgataactc tcgggcggca acgggtgcgt tggcgaaccg
     3361 agtccgagga tgtacagcag caaaccttcg tcgtagcctt cgtagcggtg tgggatgaac
     3421 ccgttctccg gccgccagcc atgggtaaga gtcggtccac cgtctcgggc ccaattccag
     3481 tcggcccgac ggtaaagagc atcggccaag cttctaatct cgacctcgtc gggcgtatca
     3541 cggtcgaaat aggcgccgac tgtcaaggcg cccgcgaaga gaaaggccga gtcgatggtg
     3601 gaaagctcgc actgccagac gcggcgaccc gtttcgatat ctaggaagtg gtagaaaaag
     3661 cctttgtaac cggaggcgtc cggttcggga ccttgcgggc attcgagcag gtaacgcagt
     3721 cgtttccggg tgatcttggc ggcgaaatct cggaacagga cgccacgctc gatgacgact
     3781 gggatcgtgg ccagtgccat gccgcaggag gcgatgctga ccggggcgct cggatccgtc
     3841 ttgtcgcgga ccagcccgtt gtccgggttg gtttcgtgta gatagtacag gaccgttgac
     3901 agttgcagca ggttcagatc tctgtcggtg ggcagtcgat ttaaatcgtt gtcgacaccg
     3961 ggagtatcgg ccatgggtcc gttgctctcc atcagcccaa tcgtacgcgg acgttgtgag
     4021 ttttcccgtc gtcgcccaaa ggcacattgc cgtccgacaa tggttgcccg tccaactcga
     4081 ccgatttgac gccgcgaccc atgccagccg agttgtccac cagaattcgg tatgtcgcgg
     4141 accggtggcg atagctcagt tcaaacccgg gccatctcgg cgggacacat ggctcgaaac
     4201 gaagggtgcc gccccgcaat cggaaaccca ggatcgtttc aatggcgacg cgatagagcc
     4261 agctcgccga gccggtgtac cacgtccagc cgccgcggcc cgtgtgaggt ggggcgccat
     4321 atacgtcggc acaaaccaca tacggctcaa ctttgta
//
LOCUS       DATILV010000188         2110 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1577598, whole genome shotgun sequence.
ACCESSION   DATILV010000188 DATILV010000000
VERSION     DATILV010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2110
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1577598"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..221
                     /locus_tag="VLJ17_04260"
     CDS             <1..221
                     /locus_tag="VLJ17_04260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016552455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pirin-like C-terminal cupin domain-containing
                     protein"
                     /protein_id="HSV22223.1"
                     /translation="IRERTGNRSLVLFDSGDEVTIEAGDEGIRFLLVSGKPIEEPVAW
                     YGPIVMNTKAELQQAVAELNAGTFIKHG"
     gene            354..1346
                     /locus_tag="VLJ17_04265"
     CDS             354..1346
                     /locus_tag="VLJ17_04265"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV22224.1"
                     /translation="MNRFRVALCAVYACFALVLAPASPSPASAQASWPQRTVRFVLPL
                     GPGSGVDIGARLFADRLASRWGKPVVVENRPGGDGIVAITAFVSAHDDHTLLLSPAST
                     FTAHPFLHDKLPYNQADLLPISRVSNTLVVIVVPMTLKVGSLAELMALVRAEPGKLNW
                     ATATGISDFLFASLLKQANLSMSKVPYRDTVQPSTDVAEGRIQFYWGALAIVRPHVQA
                     GKARLLAVSNGVHIPDEPAVPTVKEAGFPTLAFDGLVGLFGPRDMADDIRERIADDIR
                     AVADDPAIGARLLSTGQLLSPGRPAEFAASIDEQRAVVATIAREMGIKPAQQPQ"
     gene            1361..1894
                     /locus_tag="VLJ17_04270"
     CDS             1361..1894
                     /locus_tag="VLJ17_04270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSV22225.1"
                     /translation="MSTRPYLVAKPLAENPHPIVAGARIGHVHLKVADLDRALAFYTG
                     VLGFELMQRYGSQAAFISAGGYHHHIGLNTWESKGGVPPAPGTTGLYHVAILYPTRAD
                     LAGALRRLMAAKIPLDGASDHGVSEALYLRDPDQNGVELYWDRPEAQWPRNPDGNINM
                     KTEPLDLRNLLAEANAA"
BASE COUNT          387 a          659 c          658 g          406 t
ORIGIN      
        1 ttatccgcga acgtaccggc aaccgttcac tggtgctgtt tgacagcggc gacgaagtga
       61 cgatcgaggc cggcgacgag ggcatccggt tcctgcttgt ctccggcaaa cctattgagg
      121 agccagtcgc ctggtatggg ccgatcgtga tgaacaccaa ggctgagctg cagcaggcgg
      181 tcgccgagtt gaacgccggt accttcatca aacatgggtg aaaatggggg cgtgccatcg
      241 ttggtgcgac acgggggccc gtgcctatcg aaccggcgcc gtggtaactt cgccggccaa
      301 cttggcgtgc agtcctgcgc ccggagcgag gggagtgtcc gggggagatg ttcatgaatc
      361 gatttcgcgt cgcgctatgc gccgtgtacg cctgctttgc actggtattg gcccctgcat
      421 ccccgtcgcc ggcatccgcc caagcgtcgt ggcctcagcg caccgtgcgt tttgtgctgc
      481 cgctgggccc cggcagcggc gtcgacatcg gggcacggct gttcgcggac cggctggcgt
      541 cgcgctgggg caaaccggtg gtggtcgaga accgtcccgg cggcgacggt atcgtggcaa
      601 tcacggcatt cgtcagcgcc cacgatgatc atacgttgct gctctcaccc gcctcgacat
      661 tcacggccca cccgtttctt cacgacaagc tcccttacaa tcaggccgac cttttaccaa
      721 tctcacgggt atccaacacc ctcgtcgtca ttgtggtgcc gatgaccctg aaggtcggct
      781 cgcttgccga gttgatggcg ctcgtccgcg cggagcccgg caagctcaac tgggcgaccg
      841 cgaccggcat cagcgatttt ctgttcgcgt cgctcctgaa acaagccaat ctcagcatgt
      901 ccaaagtccc ctatcgcgac actgttcaac cctccacgga tgtcgccgaa ggacgcatcc
      961 agttttattg gggagcgctc gccatcgtgc ggccccatgt gcaagccggc aaggcgaggc
     1021 tcctcgccgt gagtaacggc gtgcacattc ccgatgagcc tgccgttccg acggtcaagg
     1081 aggcaggttt tcccacgctg gcattcgacg gcctggtcgg actgttcggc ccgcgtgaca
     1141 tggccgacga tattcgcgag cgcattgccg acgatatccg tgcggttgcc gacgatcctg
     1201 cgatcggggc gcgccttcta agtaccggcc agttgctcag cccgggacgg ccggccgaat
     1261 ttgcggcatc aatcgatgaa cagcgcgccg tggtcgcgac gatcgcaagg gagatgggga
     1321 tcaaacccgc gcagcagccg caatagatgt ggagcaatcg atgtcgacac gaccttatct
     1381 cgttgccaaa cccctcgcag aaaatccgca tcccatcgtt gcgggcgcga ggatcggcca
     1441 cgtgcacctg aaagtcgccg atctcgaccg tgctctcgca ttctatacgg gcgtgctggg
     1501 tttcgagctg atgcagcgct acggcagcca agcggctttc atctcggccg gcggatatca
     1561 ccaccacatc ggccttaata cgtgggagag taaaggcggc gtgccgccag ccccaggcac
     1621 cactggactt tatcatgtgg cgatcctgta cccgacccgc gccgacctcg ccggcgcttt
     1681 gcggcgattg atggcggcga aaatacctct ggatggtgcg agcgatcacg gcgtgagcga
     1741 ggcgttgtat ctgcgcgatc cggaccagaa tggcgtcgag ctatattggg accggccaga
     1801 ggcccaatgg ccacgcaacc cggatggaaa cattaatatg aagacggagc cgcttgacct
     1861 gcggaacctg ctcgccgagg cgaacgccgc gtagggcggc ggttcgcttt aaccgccaaa
     1921 cacacttagg atgggcacag cgaagcgtgc gcgccgcggc gtttcaatgc acttctagag
     1981 catagtgtga tcgattcgat ggcgcgaccc cggagggcac gcttcgcttt gcgacgactt
     2041 gcgggagaaa gcgctatctc gtcggcacag gcttgtcgcc acgatagtcg tagaacccgc
     2101 gtttggtctt
//
LOCUS       DATILV010000189         2997 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1577791, whole genome shotgun sequence.
ACCESSION   DATILV010000189 DATILV010000000
VERSION     DATILV010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2997)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2997)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2997
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1577791"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2991)
                     /locus_tag="VLJ17_04275"
     CDS             complement(<1..2991)
                     /locus_tag="VLJ17_04275"
                     /inference="COORDINATES: protein motif:HMM:NF042646.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6603 domain-containing protein"
                     /protein_id="HSV22226.1"
                     /translation="MPDAIDHLLHDPAAHVQAAVADGAQQTVLANGLTQLLSGIPGLT
                     VDLAGRRLVLDTGGVPGERGMVNWAAHVEASATGTLNALVVLGSAGTTAAGGAVVRLE
                     TGPFRVMLEWHRPGLAVPQNISLWPTPDAVALGSVIGRLLPAECARLGLEYLRSLDDT
                     AKPIIDVALDSIGLLGPAVRGQRSVLFPLGLFHDPAGWFAHDSAFGGSGGYIAPRVVA
                     LLDALKPILGVAGNPGEWNLANGVTVLADSDNGHLRLGLQVDTTVLTPISGAAGRLVS
                     TGTFHLTLAPEGSPRPSATLSLGLAGAAPGRRAIYVELADHIRLYLRPDTGADISLYP
                     DPPGLAALASGAVTQALPLVLDALASQTGANLQGRVGEIVRSVGDGLNLRSGAPLKFD
                     GTKLQAWATDPVASLVAAVPTLTSGALNAIANALGPALPAGVTANATAGKVTVSAGGV
                     SLTWQPSPLQFELSGTVTGIPAIDRVHGSIVLDGSGLKSLTAQAGPCVIDAGTVNLRP
                     YLAAAVGQAPAGGRRIELGLALDGAGTQLVAGRWNIDGAGLGLIAVDGTTTFTDAEHV
                     AIMVVEAVLDLVASFVISTSTVQALLNNSVGGTTVRGVLTNAVLAPGPGNHLLPNLFD
                     PAQLLQRVQTLASNLAGASPSISIGGGLTFGLSKAGPVVQITVGVNGRIPLVQNDIVV
                     SIEADSRWIEGQPPAGITIGVFDAASMSFAPSLSANGIGIRIGKGSGPLLNLGLSLGS
                     VAVHLYGAIAPGSVSGGVQVQLSDLAVGVAGAQGGNPVARGLMGDSGSGQNKLAPSFS
                     PALAVQKRSGGGFKVSLSAGDGSGPWWLVMQKGFGPIYIEQVGFGVTVDQDQLKTISL
                     LLDGRVSIFGLTAAVDELQLTFVIASDASLFDPSRWAIDLAGLAINADMAGIVLSGGM
                     RKFGDGDNVEYVGMLLARFAVYGLSVYGGYGSAVVNGQRFSAFFAFGAINGPIGGPPA
                     FFLTGIGGGLGINRDLIFPSDLSRF"
BASE COUNT          597 a         1002 c          918 g          480 t
ORIGIN      
        1 gaagcgcgac aagtcactgg ggaagatcag gtcgcgattg atgcccagtc cgccgccgat
       61 gccggtgagg aagaacgcgg gcggacctcc gatgggacca ttaatcgcgc cgaaagcgaa
      121 gaacgccgag aagcgttggc cgttcaccac cgcgctgccg tagccgccgt agacgctcag
      181 cccatagacg gcgaagcggg ccagcagcat tcccacatac tccacattgt cgccatcgcc
      241 aaacttgcgc atgccgccgg aaagcacgat tccggccata tcggcattga tcgccagccc
      301 tgcgagatcg atggcccagc gactgggatc gaacagcgat gcgtccgagg cgattacgaa
      361 ggtgagctgc agttcgtcca ccgccgcggt caatccaaaa atcgaaaccc gtccgtcaag
      421 caaaagcgaa atcgtcttca gttggtcctg gtccacagtg acgccgaagc cgacctgctc
      481 aatgtaaatc ggtccaaagc ctttctgcat gaccagccac catggaccgc ttccgtcgcc
      541 ggccgagagc gaaaccttga acccgccgcc gctgcgcttc tgtaccgcca gtgccggact
      601 gaacgacggc gcgagcttat tttgtccgct gcccgaatcg cccatcaggc ctcgcgctac
      661 cgggttgccg ccctgcgcgc cggccactcc caccgcgaga tcgctcaact gcacctgcac
      721 gccaccggaa accgagcccg gagcgattgc gccgtacaag tgcacggcca ccgatcccag
      781 agacaatccc aggttgagca gcgggccact gccctttcca attcgtatgc cgatgccatt
      841 ggccgaaagg ctgggcgcga agctcatgct ggcggcgtcg aatacgccaa tcgtaattcc
      901 cgcagggggc tgtccttcga tccagcggct gtctgcctcg atggacacaa cgatgtcgtt
      961 ctgcaccagg ggtattcggc cgttcacccc gaccgtgatc tgaactaccg ggccagcttt
     1021 ggaaagcccg aaggtcagtc ccccgccaat gctgatcgac ggactggctc ctgccagatt
     1081 ggaggccagc gtctgcacgc gttgcaggag ttgcgccgga tcgaagaggt tgggcagcag
     1141 gtgattcccg ggtccgggag ccagcacagc gttggtcagt accccacgca ccgtggtgcc
     1201 accgacagaa ttgttcagca gcgcctgaac cgtcgaggtg gaaatcacga agctcgccac
     1261 cagatcgagg accgcctcca ccaccatgat cgcgacgtgc tcggcgtcgg tgaaggtggt
     1321 tgtgccatcc acggcaatta ggccgagacc agcgccatcg atgttccagc ggccggctac
     1381 cagctgggtg cctgcgccgt cgagcgccag acccaattcg atgcgccgcc cgcctgcagg
     1441 agcctgaccg accgcagccg caagatacgg tcgcaggttt acggttccgg catcgatgac
     1501 gcaaggaccg gcctgcgccg tcagcgactt caatccgctg ccgtcgagaa cgatggagcc
     1561 atgcacgcga tcgatggcgg gaatgccggt cacggttccg cttaactcga attgcagcgg
     1621 agagggttgc caggtcagcg aaacgcctcc cgcactgacc gtcacctttc ccgcagtggc
     1681 gttggcggtc acgccggccg gcagtgcagg accgagcgcg ttggcgatgg cgttcagcgc
     1741 gccgctggtg agagtgggca ccgccgccac cagcgatgcg acgggatcgg tcgcccaagc
     1801 ttgcagcttg gtcccatcaa acttcagtgg cgctccgctg cgcagattca atccgtcacc
     1861 cacgctgcga acgatctcgc cgacgcgtcc ttgcagattc gctcccgtct ggctcgccaa
     1921 cgcgtccagc accagcggca atgcctgggt cacggctcct gacgcgagcg ctgcgagtcc
     1981 cggaggatcg ggatacaacg agatgtcggc gcccgtgtca ggccgcagat aaaggcgaat
     2041 gtggtccgcg agttcgacgt agattgcgcg tcgtcccggc gctgctcctg caagccccaa
     2101 cgacaacgtc gcacttggcc tcggagatcc ttccggcgca agcgttaggt ggaacgttcc
     2161 ggttgagacc agccgtcccg ccgcaccgct aatcggtgta agaacggtgg tatcaacctg
     2221 taagccgagg cgcaaatggc cattgtcgga atccgccagc acagtaacgc cattggcgag
     2281 gttccattcg ccgggattgc cagcgactcc tagaatcggc ttcaacgcgt cgagtaatgc
     2341 caccacgcga ggcgcgatgt agccaccgga gccgccaaag gcgctgtcgt gcgcgaacca
     2401 gcccgcagga tcgtggaaga gtccgagagg aaacagcacg gagcgctggc ctcggacggc
     2461 gggtcccagc agtccgattg aatcgagggc cacatcaatg atgggcttgg cggtgtcgtc
     2521 aagcgaacgc aggtactcga gtccgagccg cgcacactcg gccggaagca gccgtccaat
     2581 cacgctgcca agtgcgaccg catccggagt aggccacagc gaaatgttct gcggcaccgc
     2641 caggccgggc cggtgccatt ccagcatcac gcggaaagga ccggtctcca accgcaccac
     2701 tgcgccgccc gcggcggtgg tacctgccga cccgaggacc accagcgcat tcagcgtccc
     2761 ggtggcggaa gcttccacgt gggccgccca gttcaccatg ccgcgctctc cgggaacccc
     2821 gccggtgtcc agcaccagcc gacggcccgc aagatccacg gtaagtcccg gaatgccaga
     2881 gagcaactgc gtcaatccgt ttgcgagtac agtttgctgt gcgccatcgg cgaccgccgc
     2941 ctgcacgtga gcggcaggat cgtgcagcaa atgatcgata gcatcgggca cggctcc
//
LOCUS       DATILV010000190         3440 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4644508, whole genome shotgun sequence.
ACCESSION   DATILV010000190 DATILV010000000
VERSION     DATILV010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3440)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3440)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3440
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4644508"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..238
                     /locus_tag="VLJ17_04280"
     CDS             <1..238
                     /locus_tag="VLJ17_04280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22227.1"
                     /translation="PTNRGVQRIIRPQPPTFLEQLMSSGGDDDDAQVLTKQDQAMLAA
                     LPDDVRHVFHYAQLLDGVKRGDVLYLLPFDLRIR"
     gene            345..1553
                     /locus_tag="VLJ17_04285"
     CDS             345..1553
                     /locus_tag="VLJ17_04285"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HSV22228.1"
                     /translation="MACACLGARGQTPTPSPRPSAIGLTFESIYQIAERDNLLINAVR
                     LRRAVAEADIIIAGERPNPDFITAYTRTQPRLNTFYSQLVELGGKRGRRIDVARNELQ
                     LTELELDAALRTLRHDVRAAYFNVLLARDNLDLGRDILAQAKQLAEIAQARFDAGDIA
                     HFEVLQVNLGVARITNEVARLEDAERVARSTVNQLLNRAPDAPLDLSDTLSVKIQTAS
                     TPDLIQQALIQNVELKTAEHQIATEESRLRLARAQRVPDVTVQPGLEYFDSAYPGRPG
                     FNMQVTVPLPIFNRQKGEIQKSNATLDQLRAERDATRQRIAAEVGRAALNLDSARRQV
                     DFYETKLLPDAERVRQMAVESYQAGQTGILSVIDATRNARDVRQAYLQALLDYQSAVA
                     DLEQAAGVKF"
     gene            1685..2971
                     /locus_tag="VLJ17_04290"
     CDS             1685..2971
                     /locus_tag="VLJ17_04290"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSV22229.1"
                     /translation="MFLIVGIWIIARRGAGEEEVEPIVEVEVAPTQRLEVREYVEGNG
                     SLNAMPGHEASFSAATAGKVTHVLVQVGQHVSAGQTVALLDRSVLAAQVRQQQAALQQ
                     AQFSAAQARRVSGSQTPIATDQLRQAEATLATARSNQTLAENNFARQQRLFERGIAAR
                     KDVEEAQNQITVTTEAVRQAESALAAARVTAERGLGEAHTQASVSAGAVNAAQAALDV
                     SRAELSRATIRSPIAGTITKRLVNDGEAVDPATPAFEVIDASSLDVVANLPAEYLGRV
                     KTGDLAVVHVEASDKEFSGGVVQVAPSVDPQTNTVAVRVRLPNESGELKAGVYANARI
                     AVEIHQNALVVPESALVVQGDETFVFVPHSDKVEKRKVTVGIRDSGHAEITEGLKDKE
                     QVVVAGAFGLGDGTKIKIVQPEEKKEGEKKSESEKP"
     gene            3019..>3440
                     /locus_tag="VLJ17_04295"
     CDS             3019..>3440
                     /locus_tag="VLJ17_04295"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSV22230.1"
                     /translation="MNVARFAERHHKATYLVLALLCVAGLYSVTQLPSSIYPEVEFPR
                     IIVVAEGVQYEPRNMITAVARPLEDALSALQGVQIARITTRAVRGSAQISVQFSPDTD
                     MQLALQLAQTKVGEIQPELPAGVTVDVQRLTPSVFPII"
BASE COUNT          785 a          977 c          999 g          679 t
ORIGIN      
        1 tcccacaaat cgaggcgtgc aaaggatcat tcggcctcag ccgccgactt tcctggagca
       61 actgatgagc agtggcggag atgatgacga cgcccaggtc ctgacgaagc aggaccaggc
      121 tatgctggct gctttacctg acgacgtccg gcacgttttt cattacgccc aactgctgga
      181 cggcgtgaag cggggcgacg tcctgtactt gctgccgttc gatttgcgga tcagataggc
      241 ttcatcttac attactcccg ctctaatact attctccccc ttcgggagac tgattgttca
      301 acgtgccccg atcgactggc cgaagcctat cgactctgat cttgatggcg tgcgcttgtc
      361 tgggagcgcg cggtcagact ccgacgccat cacctagacc gtccgcaatc ggcctgacgt
      421 ttgaaagcat ctaccaaatc gccgaacgcg acaacctgct gataaatgca gtgcggctgc
      481 ggcgcgccgt tgccgaggca gacatcatca ttgccggtga gcggcctaat cctgatttta
      541 ttaccgccta cacccgaacg cagccacggt tgaatacttt ctattcgcag ttggttgaat
      601 tgggaggcaa gcgtggtcga cgaattgatg ttgcgcgcaa cgagctgcaa ctgactgagc
      661 ttgaattgga cgctgcgctg cgcactttgc ggcatgacgt gcgggcggct tatttcaacg
      721 ttctgctggc cagggacaat ctcgatctcg gccgcgatat tctggcccaa gcaaaacaac
      781 ttgcagagat cgcccaggcg cgctttgatg ccggcgacat tgcgcatttc gaagtcttgc
      841 aagtgaatct gggtgttgcg cggataacca acgaagtggc cagactggaa gatgctgagc
      901 gcgtggcgcg ctcgactgtc aatcagctac tgaatcgcgc gccggatgca cccctggatc
      961 tgagcgatac gctgtcagtg aaaatccaaa ccgcctcaac gccggatctg attcaacagg
     1021 cgttgatcca aaacgtcgag ttaaagactg ccgaacacca gattgccacc gaagaaagcc
     1081 ggttgcggct ggcccgcgcg cagcgagttc ccgatgtcac ggtacaacct ggactcgaat
     1141 atttcgattc tgcttatcct ggccgtcccg gtttcaacat gcaagtgact gtgccgctgc
     1201 caatcttcaa tcgacagaaa ggtgaaattc agaagagcaa cgctacgctg gaccagttgc
     1261 gcgccgagcg cgacgcgact cgtcaacgca ttgcggcaga ggtaggccgc gcggcgctaa
     1321 acctggattc tgcccgccgg caggttgact tctatgaaac gaaattgctc cccgacgcgg
     1381 aacgcgtgcg tcaaatggcg gttgaatcct atcaggcggg ccaaactgga atcctatcgg
     1441 ttattgatgc gacacgaaac gcgcgcgacg tgcggcaggc ttacctgcaa gctcttttag
     1501 attaccagtc ggccgtcgcc gatctggaac aggccgcggg agtcaaattt tgatcaacga
     1561 ccaccacact tcaaaggacg accgaacgac tggctccgtc gaggtaaacg aatatcactt
     1621 gcggaccaca aaggccccgc gccggttgcg accgttgcca atcgcgatcg ccgccatagt
     1681 cgtggtgttc ctgatcgtgg gcatttggat catcgcgcgc cgcggtgcgg gagaagagga
     1741 agtagaaccg attgtcgagg tcgaagttgc ccccactcaa cgcctggaag ttcgcgaata
     1801 tgtagagggg aacggcagcc tcaatgcaat gcccggtcac gaagcaagtt ttagcgccgc
     1861 gactgctgga aaagttaccc atgttctggt tcaggtgggc caacacgtta gtgcgggtca
     1921 aacggtcgcg ctgcttgacc gcagcgtcct ggccgcccag gtaagacagc aacaagcggc
     1981 cttgcagcaa gcccagttta gcgcagccca ggcgcgcagg gtctcagggt cgcagactcc
     2041 gattgcgact gatcaactgc gacaggctga agctaccttg gctaccgcgc gttcaaatca
     2101 aactcttgcg gaaaacaact ttgcgcgcca gcaaagatta ttcgaacgcg gtatcgcggc
     2161 ccgaaaagat gtcgaagagg cacaaaacca aatcaccgta acgaccgaag ccgtccggca
     2221 ggccgagtca gcgctggcgg cggcccgcgt aaccgcagag cgaggcctgg gcgaagcgca
     2281 tacccaggcc tcagtctctg ccggagcggt gaatgcagcg caggctgcgc tggatgtctc
     2341 acgagcggag ttgtcccgag ccacaattcg ttcgccaatt gccggcacta tcaccaagcg
     2401 cctggtaaat gacggcgaag cagtcgatcc ggcgacgccg gcgtttgaag taatcgatgc
     2461 ctcgtcgctt gatgtagtcg caaatctgcc ggcggagtat ctcggacgag ttaagacggg
     2521 cgacctggcc gtcgttcacg tggaagccag cgataaagag ttctcgggtg gcgtagtcca
     2581 ggtcgctccc tcagtcgatc cccaaacgaa tacggtcgcc gtgcgtgttc gtctgccaaa
     2641 tgagagcggc gagttgaaag ccggagttta cgccaacgca cgtattgccg tcgaaattca
     2701 tcagaatgca ctggtggttc cggaaagcgc tttggtggtt cagggtgacg aaactttcgt
     2761 gttcgtgcca cacagcgaca aagttgaaaa gcgcaaggta acagtgggaa tccgggacag
     2821 cggccacgcc gagatcacgg aaggtctcaa agacaaagag caggtcgtag tagcgggagc
     2881 ttttggttta ggcgacggca ccaaaattaa aattgtgcag ccggaggaga aaaaagaagg
     2941 cgaaaagaaa tcagaaagtg agaagccgtg aatcggctgg cgcacattaa gcagcacaac
     3001 cgtcaacggc cgtaggtcat gaacgtcgct cgtttcgctg aacgtcacca taaagccact
     3061 tatctggtgc tcgcgttgtt gtgcgtagcc ggactgtaca gcgtaacgca actcccctcg
     3121 tcaatttatc ctgaagtcga attcccgcgg attatcgtcg tggccgaagg cgtccagtac
     3181 gaaccacgca acatgatcac cgccgtggcc cggccgttgg aagacgccct cagcgcattg
     3241 caaggcgtgc aaatagcccg catcaccacc cgagccgtgc gcggctcggc ccagatttcg
     3301 gtccagtttt ctcctgatac tgatatgcag cttgcgctgc agttggccca gacgaaggtc
     3361 ggcgaaatcc agcccgagct gcccgcgggt gtgacggtcg atgtgcaacg cctgacgccg
     3421 tccgtgtttc cgattatcag
//
LOCUS       DATILV010000191         4044 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4389035, whole genome shotgun sequence.
ACCESSION   DATILV010000191 DATILV010000000
VERSION     DATILV010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4044
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4389035"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(553..867)
                     /locus_tag="VLJ17_04300"
     CDS             complement(553..867)
                     /locus_tag="VLJ17_04300"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HSV22231.1"
                     /translation="MAVIDNDKKKSFTNKRKHSRVALVYGGRLVARDGSFGSKCVVLD
                     ISEMGARLKIDDAAAVPDEVVLLLSRGGETQRHCTVVWRGRDEMGVRFEKGPAEASAD
                     PA"
     gene            1045..1539
                     /locus_tag="VLJ17_04305"
     CDS             1045..1539
                     /locus_tag="VLJ17_04305"
                     /inference="COORDINATES: protein motif:HMM:NF012415.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HSV22232.1"
                     /translation="MKMIVVIMLILVSGPALAQGGAAQTISQYRQRHGLSAVRSDPVL
                     TQLAQQQARAMAAAGVMDHSIAGSFSSRIAGANASTAAENIAAGTRDFSSTFDLWQRS
                     PGHNANLLRPGVTRIGIASASAPNTRMKIYWALILAGNAERGPAPKGRQSKGPSGLRL
                     LVPQ"
     gene            1642..2142
                     /locus_tag="VLJ17_04310"
     CDS             1642..2142
                     /locus_tag="VLJ17_04310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018264235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HSV22233.1"
                     /translation="MIDLAYVRRMARYNRWQNENLYGVADRLPDNERRRERGAFFGSI
                     HKTLSHLLWADRAWMSRFADLPRPQGGIAQSVSLYPDWDPLKHGRAEFDRTMLAWAEQ
                     LDSSWLVGDLTWYSGTVQAEVTRPKWLLVAHMFNHQTHHRGQVHCMLTQAGGRPHETD
                     LPFTPD"
     gene            complement(2148..2291)
                     /locus_tag="VLJ17_04315"
     CDS             complement(2148..2291)
                     /locus_tag="VLJ17_04315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22234.1"
                     /translation="MNDHDGFLGYVLGSTLVLVAMLLIIGDIGRHGGANRSDTTITGT
                     TGR"
     gene            complement(2992..3183)
                     /locus_tag="VLJ17_04320"
     CDS             complement(2992..3183)
                     /locus_tag="VLJ17_04320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22235.1"
                     /translation="MNAHIRVQSADPVAIGSTSRFGGEKSKGRTTRLGASVLVISWLV
                     LTPVGIALFAWVLSHIVYL"
     gene            3356..3754
                     /locus_tag="VLJ17_04325"
     CDS             3356..3754
                     /locus_tag="VLJ17_04325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22236.1"
                     /translation="MTKGLTRARSRCSARASAWGRVHVAVFVFSATHQREHVATHMRP
                     LRSAFACISASAASRQMRSALRAAVTRHGLSCGAVLGKVRIVTIFPVAWSFGARQERQ
                     PVAAIRSARPDLLSQTFRRRRQRFAARRLN"
BASE COUNT          747 a         1255 c         1266 g          776 t
ORIGIN      
        1 ggatgcggcg cgcgccgtag gatgtgagtc ttctggccgc atgtttcgca atacggcgcc
       61 ggaggcagat gttggaaccc gtgttgcatc gggacggaac cgttctggcc gtgagttcgc
      121 tccgacaccg acggttggcc cgcgcggtcc cgttgtcaat gcggccggct taggttcacg
      181 cgtctagggt tgtgaattgc ctaagcaaca cgggcgaaat tgttctgtgt tcgatgcact
      241 ggcagtgccg gacggtcgat cggccggaaa tcgtcgaatg atcaaaattg aaacgaaatt
      301 gatcgagggt gtcgcttggt cgtgatggca ataagaacaa cggacgagga aagagcgaac
      361 ggccccggcc cgacggagag tcagaaagcc ggggccgttc taaccaccaa gcgggcagtg
      421 gtgctcgatg gctgcaggga aaacgttggc cgctttcgca cggttccgct catcgcgcga
      481 tgattgtaaa ttcgccgtca cggtttcgga accatcgtcg gtcgcttgca aaggcggaaa
      541 ccaggcgacg actcacgccg gatcggcaga agcttcggcc ggcccctttt caaagcgtac
      601 gcccatttcg tctcgtcctc gccacacgac tgtgcagtgc cgttgcgttt cgccgccgcg
      661 cgaaagcagg agaacgacct cgtctggcac agctgccgca tcgtcgatct tgagccgcgc
      721 ccccatttcc gaaatgtcga gaaccacgca cttgctccca aacgatccat cgcgcgccac
      781 cagccgcccg ccgtacacga gggcgacgcg cgaatgcttg cgcttgttgg taaacgactt
      841 cttcttgtcg ttgtcgatga cagccatggc tcatcccgcg gcgaggaagc gttcagtagg
      901 ttcatgggga ttgtagcgca gatggacccc gcgtgtccgg tttgcccggc gcgtggccga
      961 ccaacaggcg gcccagccat ccggacgcca caatcgtccg atgttgagga ccggcgcttt
     1021 catcgtttac gcaggtcccc agccatgaaa atgattgtcg tcatcatgct gattctcgtc
     1081 tcgggcccag ctttggccca gggcggggca gcgcagacta tctcgcagta tcgtcaacgg
     1141 cacggcctgt cggccgtcag gtcggatccg gtgttgacgc agctggcaca gcagcaggcc
     1201 cgcgcaatgg ctgcggccgg cgtcatggac cacagcattg cagggtcttt ttcctctcgg
     1261 atcgcggggg ccaatgccag caccgccgcg gagaacatcg cggccggcac cagggatttt
     1321 tcgtccacgt tcgatttgtg gcaacgctcg ccggggcaca acgccaattt gctgcgaccc
     1381 ggcgtcacgc gaatcggtat cgcctccgcc tcggcgccga acacgcggat gaagatctac
     1441 tgggcgctga tcctagcggg aaacgccgag cgcggacctg cgcccaaagg tcggcaatcg
     1501 aaggggccct ccggactgcg tctcttggtg ccccaataag cgcccttgca gtgatggcgt
     1561 cggtggcctg aatgtctgtc caaacagatg ggtcgcgtct gtttgggtgg catcatgagg
     1621 atgtaggttg gggagcaacc catgatcgat cttgcctatg tccgacggat ggcgcgttac
     1681 aatcgctggc agaacgaaaa cctgtacggc gtcgccgacc gccttcccga caacgagcgg
     1741 cggcgtgaac gcggtgcgtt ctttggctcc atccacaaga ccctaagcca tctgctatgg
     1801 gccgatcgcg cgtggatgag ccgatttgcc gacctgccgc ggccccaggg tggcattgcg
     1861 caatcggtat cgctctatcc cgattgggac ccgctgaagc acggacgtgc cgaatttgat
     1921 cgaacaatgc tggcgtgggc cgagcaattg gattcgtcgt ggctggtcgg cgacctgaca
     1981 tggtactccg gtacggtcca ggccgaggtc acgaggccga aatggctgct ggtcgcccac
     2041 atgttcaatc accagaccca ccatcgcggg caggttcact gcatgctgac gcaagccggc
     2101 ggcaggccgc acgagaccga cttgccgttc acgccggatt gacgcggcta cctgccggtg
     2161 gtgccggtga ttgtcgtatc agaacggttg gcgccgccgt ggcgcccgat atcgccaatg
     2221 atcagcagca tcgcaaccaa gacgagtgtg gatcccagca cgtatcccag gaaaccgtca
     2281 tgatcgttca tagtgccccc aagccgtctt ccgacggccg tcgatcccga cactggtgcc
     2341 ggcgcgtccc acgcggatcg gctgataagg ctagcgcgca gatacgcatg gccgtttaag
     2401 agatttggtt aaatttttcc ggcacctccg ccgagacatc cgatgtacga cccgcaccgc
     2461 ccgcacgatg ccctgggccg gacgggccat tggcccgatg atccgggaac cggctcgcct
     2521 tcacgcacgc ctgcgcttat cctgaagggg gttagggtgt tgtgctcggt catgcccgat
     2581 ctcaaagacg gtcagatttg ggacgagtga ccttgcgggt acggcgatgg cgataaaggg
     2641 tgtgagccgg ctcacagtct gcgcgtccgg ccgatgctat aatccctgaa gcaaacaacc
     2701 tttctcgacg tgtcaacgaa acggtcgttc cgcaatggct gcgttcaaac tatcgggcac
     2761 tgatcactgg ccggagccac ccgtgctcta ccaggcagtc gccattgtca tcttcctgtt
     2821 gattatcggg atgatgccgc tcgtttcccg ttagcactaa cctccgagtg ccggcttgcg
     2881 tgcgccggca ctcggcctgt tcacctgcgg ccgcaagaaa cgaccggcgc aacccatcgg
     2941 tcacgccggc ccgacagcgt caagcctgca ctcatgcaca ggcctgcgcg ctcacagata
     3001 gacgatgtgg ctgaggaccc aagcgaacag ggcgatcccg accggggtca acaccagcca
     3061 gctaatgacc aagaccgacg cgcccagtcg ggtcgtccgg cctttgcttt tttcgccgcc
     3121 gaaccgcgag gtcgaaccaa ttgcgaccgg gtcagcagat tggactcgta tgtgcgcgtt
     3181 catgggcggt actccgagat agaaccgaca ctccacacac cgccacattt ccctagggcg
     3241 ctgcgttatg tgtcatattg gtacacgccg tgccgggact tggctgtgat gcgggtcaca
     3301 ggccataaca tattgaaaat gaattcatat ttctgatttc cgcaagggca gacaagtgac
     3361 aaaggggctg acacgcgcga ggtcgcgatg cagcgcaagg gcaagcgcct ggggccgtgt
     3421 ccacgtcgcc gtattcgttt tcagcgccac gcatcagcgc gagcatgtcg ccacccacat
     3481 gcgccccctg cgcagcgcct tcgcatgcat cagcgcttcg gcagcatcgc ggcagatgcg
     3541 gtcggcattg cgcgccgcag tgacgcgcca cggtctctcc tgcggcgccg tgctcggcaa
     3601 ggtgcgcatc gtgacgatct tcccggtcgc ctggtcgttc ggcgcgcgcc aagaacggca
     3661 gcctgtcgcg gcaattcgct cggcgcgtcc ggacctcttg tcccaaacat tccgccggcg
     3721 gcggcagcgt ttcgctgctc gccgattgaa ttgacggccg acgcttgtcg ctggcctcac
     3781 ggtgatccga caggcgagga ttttgccttc tgctgggcgc gcacgctgtc acgccgatgc
     3841 tattgcgcct agggcagcct gcggactgag ctcaacgcct cggtcaaggt gtcggtggct
     3901 gctctcgata tggatgacga tcgccaccgg gggaaggcgg ggcaggggcg gtcccgatcc
     3961 gttggggact ggggtgggga cggggcggga tcgggaccgt gcttccagaa gcaagccacc
     4021 gtaggcccga tcgccggcgc ttag
//
LOCUS       DATILV010000192        11528 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2346012, whole genome shotgun sequence.
ACCESSION   DATILV010000192 DATILV010000000
VERSION     DATILV010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 11528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11528
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2346012"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..686)
                     /locus_tag="VLJ17_04330"
     CDS             complement(<1..686)
                     /locus_tag="VLJ17_04330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018456546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS-domain containing protein"
                     /protein_id="HSV22237.1"
                     /translation="MLMIGGLSAGAFVIAYLWMSSGNAQHIHRSNQRLDDANEALDVA
                     NKRLRSENARFDMALNYMSQGLCFFDGAQRLIFCNSRYTDMYDLPRDKVRPGITLKEI
                     VDLRYEVGSCPAMTREEYLDWRNSIEISNKSCDTVVELKNGRIVQIFHRPLPNGGWVA
                     THEDITEKRRAEIALAAAQANTERAKQEAQAAHARLLDAFEVVPEGLVLLDGDDRLVM
                     WNRKYAEIYP"
     gene            complement(1170..2045)
                     /locus_tag="VLJ17_04335"
     CDS             complement(1170..2045)
                     /locus_tag="VLJ17_04335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22238.1"
                     /translation="MSQSANFVSKSVLAASTLFGYLSVGAACSPALAVEAMGAVPDFA
                     PDSSTAWIPDRPTGDDFLPPLNGPGPVMSAKDHPYIPNGRGVQPTYRIADLTNPILKP
                     WAVERMKKANDEVLAGKIPYITRERCWPAGVPGFIVYTRVQALYFYQTPTKVTLISEL
                     NQQPRHIYLNVPHSQNPKPSWYGESVGHYEGDELVVDTIGLNDKTHVDNYRTPHTEQI
                     HVVERFKMIEGGKTLQAVVTVDDPGAFNISWSAIQRWRRVSDRPIREMICAENNLNFF
                     NYVVVPIPQADTPDF"
     gene            complement(2080..2946)
                     /locus_tag="VLJ17_04340"
     CDS             complement(2080..2946)
                     /locus_tag="VLJ17_04340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22239.1"
                     /translation="MGSMFVATNAIRAALVVSLWAATAVAALAAPPNQSPIPNFAPNS
                     HTSWALDQTIDDLLPPSSGPGPITFDPAHPYIPNFRGAQPTYRVADLTNPILQPWIRE
                     RMRRANDEVLAGKVPFRARERCWPIGVPGFVIYSLIEGFYFLQTPHKVTIINPGGPEV
                     RQILMNVPHSADPKPSWYGESIGHYEGDDTLVIDTIGITDKTFVDNYRTPHTTELHVV
                     ERLKLTEGGSRVQISVTVDDPGAFTIPWSATQRWRRVDRGPLSETPCNENNANYFQKY
                     GVPTPTADRPDF"
     gene            complement(3002..3733)
                     /locus_tag="VLJ17_04345"
     CDS             complement(3002..3733)
                     /locus_tag="VLJ17_04345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22240.1"
                     /translation="MGIFWVFAGAGSTLTALLAISVLSVPARAQTPDISGTYWATEYH
                     AKIQIVGGGDLPLTPAGKAAYEKNMAGLKDGSITDTARKFCVPDGLPRVLATPYPFEI
                     IQAPPGQVTIIHELNHQVRVVAMGKPMPTVRELTTFPFYNGHSVGHFEGDTLVIHTAG
                     FNEKTFIDATGAPHTDEMTTLERIRRINPTQIENVITIHDPQYYSRDWQARFVYNLRN
                     DVRLEDYVCGEPHRDLSSVAGVRRP"
     gene            4018..4434
                     /locus_tag="VLJ17_04350"
     CDS             4018..4434
                     /locus_tag="VLJ17_04350"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HSV22241.1"
                     /translation="MKSRTLGLAGIVVAMSAIPAVAHHSFAMFDAEKSKTLEGTVKEF
                     QWTNPHSWILLMVNNDQGQPEQWAIEMGGPGGLARQGWVPKTLTPGMKIKTVIHPLRD
                     GTNGGQFMAVTLPDGTLMGNPNAAPSANAGAAAPNQ"
     gene            4642..5496
                     /locus_tag="VLJ17_04355"
     CDS             4642..5496
                     /locus_tag="VLJ17_04355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22242.1"
                     /translation="MKLAFGTLVRVLVVNVVCTAAALWPALGTEAGKVPNFAPDSLTG
                     WQLLDDEFIPPPSGAGPILSDPVHPYLSFYRFPRNPKPSFRVADLSNPILQPWAREHL
                     RKVNERSLSGKVVAIPKERCWPVGVPGFLLLPATPVYFLQTPKQVSMIWMQNHQVRRV
                     YLDVPHSANVNPSWYGESVGHYEGDALVVDTIGISGKSYVDNYQTPHTDQLHVVERFH
                     MIEDGKSLEVNVHVEDPGAFTTPWDAIQRYRRTDRSPLSEVVCAENNDDHFRQGLEPM
                     PQADKPDF"
     gene            5526..6041
                     /locus_tag="VLJ17_04360"
     CDS             5526..6041
                     /locus_tag="VLJ17_04360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22243.1"
                     /translation="MRRIAFLLVLAFVASPATAQSWKEYAYPADAFSVAFPADPKIET
                     TTYQTADGRPVEARVYSVSQDGGVFKMTVADLPDPTMQENTVLDHAVRMLSQGAQITV
                     DIPHRISRVYGRQLSLAAPDGSRSSIAVFYHKQRLYQIEGTVLPTGTNATSDAIRFQQ
                     SLVFTDDSTNR"
     gene            complement(6177..7346)
                     /locus_tag="VLJ17_04365"
     CDS             complement(6177..7346)
                     /locus_tag="VLJ17_04365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018647140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2336 domain-containing protein"
                     /protein_id="HSV22244.1"
                     /translation="MIIRRFLHWVRTASAGERAEATRALARAYLYSDLSPDDRAAAES
                     AMITLLDDPSPLVRRALAEGLAASPDAPHAVIHALASDHCDVAAIVLARSPLLIDADL
                     VDLVATRNGTLQAAIAARAPLQRAVAAAVAEVGSAEACLVAIENPCADVAPSSIARII
                     DRFGHLGAIRESLFARPDLPLAARQSLVRQLSGALARFVADRAWLERDRAEEVGREAC
                     EKATIAIAALRPGDDTRALIRHLRESGQLTAGLMLRALLSGNMAMFEDTLAELTGLPL
                     RRVQALVHDRGNAGFRAVFDKAGLPASTYVGFREALSAAREAHHNGEIFGMSRLKRRM
                     VERALTSCERCDLGDIEPLMILLRRFATEAAREDARINCKQLVAEGRIEHDLAAA"
     gene            complement(7660..8706)
                     /locus_tag="VLJ17_04370"
     CDS             complement(7660..8706)
                     /locus_tag="VLJ17_04370"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HSV22245.1"
                     /translation="MTRRSTRSMDIGGIFGGPRPQSVNGAIQSAATATGASFEYLLAA
                     AQAESGLNPQAASPSSSARGLYQFIDQTWFGTVKRAGPALGYGKYADAIVQDGSGHFD
                     VPNPAMRRDIMALRFDPTANAAMAGAYTRDNAAALAEGLGRKASDGELYIAHVLGAAG
                     AIKLTSLAVSNPGAPADAAFPAAADTNRAIFYDRMGRPRSVLDVYGVLVGRFDGARNP
                     AASSFKLNPFNRAAETARVAGASAAAAVSVGAPLTIVPGMPAIGPRSAPVAVADSNAA
                     PDVAGQKSAPLFSGLFSDRSDPVSRGVQDLWAPRVRLSGDAAPSRAASLVSSSGSEQP
                     FLSQSTDRSSLFGR"
     gene            8879..9019
                     /locus_tag="VLJ17_04375"
     CDS             8879..9019
                     /locus_tag="VLJ17_04375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22246.1"
                     /translation="MERILDINAAADVLGVSFSTLRGPQEPREPGLEEAGTNGIGELC
                     PA"
     gene            9240..10067
                     /locus_tag="VLJ17_04380"
     CDS             9240..10067
                     /locus_tag="VLJ17_04380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22247.1"
                     /translation="MSESFETQRNIWAQLSISACALLLPPIALGAAVFSMLPARDDGA
                     ERLAAGAAAEAQEATSKSWVQAVQARSVKADSPPATHENAPLAASKAASDGRSVSSAN
                     ARQEAVSKKDMARVLSSVPVRVTVVTPPAAGNPSLAIDVDSVSTGAIGVQPWQSTAVE
                     TPTALLPRALTPPVQVAPVQVAPVQLVPQLSATQGAATQMPTADRSSAEGRPPPASTT
                     RKRAQLSYLRTLAGRSGARADARGETQAVHRNAQPQQTFSLKDWLQKLGTAPRDPRS"
     gene            10297..11154
                     /locus_tag="VLJ17_04385"
     CDS             10297..11154
                     /locus_tag="VLJ17_04385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22248.1"
                     /translation="MPDQGGAATRASATTASSVAALLVFIAGAVAFDQSKYPDWGGQW
                     KRPRGVATQWDQTMPSGLAQQAPLTAEFETKLEASIKDQATGGQGGDTHVSCLTNGMP
                     RIMTATFPIAFVITPAVTYIHFEAFMPRRIYTDGREFPKDEEPSYQGYSIGKWLDTDG
                     DGRYDTLEVETRNFKGPRTYENSGLPLHPDNESVIHERLSLDRDNPDLMHNEITSIDH
                     ALTRPWTITKTYRRDRNELWQDYNCGEANNHVVIGKENYFLSGDGLLMPTKKDQPPPD
                     LRYFKQTGK"
     gene            11251..>11528
                     /locus_tag="VLJ17_04390"
     CDS             11251..>11528
                     /locus_tag="VLJ17_04390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22249.1"
                     /translation="MLDRNPIGVLALIVTLASSATSADAFDDAKYPDWDGQWRRPRGL
                     ATQWDPTKPPGLAQKPPLIAEYQAIFEASVADQANGGQGADLHVKCIT"
BASE COUNT         2370 a         3445 c         3500 g         2213 t
ORIGIN      
        1 ctcgggtata tttcggcgta tttgcggttc cacatcacca gacggtcatc gccatccaaa
       61 agcaccaggc cttcgggcac gacctcgaaa gcatcaagaa gtcgcgcgtg ggcggcttga
      121 gcctcctgct tggcacgctc ggtattagcc tgcgctgccg cgagtgcaat ttcggcacgc
      181 cgcttttcag tgatgtcttc gtgcgtcgct acccagcccc cgttcgggag tggtcgatga
      241 aaaatctgga caattcgacc attcttcagc tcgaccacgg tatcgcatga cttgttagaa
      301 atctcgatgg aattccgcca atcgagatat tcctcacgag tcatggccgg acaactgcca
      361 acctcatagc gaagatcgac gatttcttta agggtgattc cgggccgtac tttatcgcgt
      421 ggcagatcat acatgtcggt gtaacggctg ttgcaaaaga tcagccgctg cgctccgtcg
      481 aagaagcaca aaccttggga catgtagttg agcgccatat caaagcgcgc attttcggag
      541 cgcaggcgct tgttggcgac atcgagcgct tcgttcgcgt catcaagccg ttggttgctg
      601 cgatggatgt gctgggcgtt accgctggac atccacaaat atgcaatcac aaaggccccg
      661 gcggagagac cgccgatcat gagcatcagg gaagcgtaat cggcagcggt ccacaataca
      721 tcggccgttg ttgccgtagc gaatcccgag ctctggcgct gaaagatgag gaacgaacta
      781 taaacggata gtaccaatcc aataacgcaa acggcggtgc tcggcaggac aagccgaccg
      841 cgccgggacg cggcgttgct gtccggcgat ttactcgggc caaagttgct cgattggaat
      901 ttgcttcgat tccttgaacg cactccggcc ctcatcatgt aaggcacacg aagatgatgc
      961 ccacctcgct ccaattctga gacgaagcgt agaaatatcc gctgtacgaa gacgtgtgag
     1021 gaggtttttc ttgaccggtc tggttagtga gacgtgccca agataggcgc cttggcggca
     1081 aattccttta cgacctgttc accatcgcgc aacgcgtgga ttaccaggcg cctactccaa
     1141 gagaggcgca ctgggcgccc ccgcggcttt cagaaatccg gcgtgtcggc ctgtggaatc
     1201 ggcacgacga cgtagttgaa aaagtttaag ttgttctcgg cacagatcat ttccctgata
     1261 ggtcggtcgg atacgcgtcg ccagcgttga atcgccgacc atgaaatgtt gaaggcaccg
     1321 gggtcatcga cggttacgac cgcctgcaac gtcttgccgc cctcgatcat cttgaagcgc
     1381 tcgacgacgt ggatctgttc cgtgtgcggc gtgcggtaat tgtccacatg ggtcttgtcg
     1441 ttgagaccga tggtgtcgac tacgagttca tcgccctcat aatggccgac cgattcgcca
     1501 taccacgatg gttttggatt ttgcgaatgc ggtacattca aataaatgtg ccgtggctgc
     1561 tggttgagct cactgatgag cgtgaccttg gtcggggtct gatagaagta caaggcttgg
     1621 acccgcgtat agacgataaa gcccggaaca cccgccggcc agcatcgctc ccgcgtgata
     1681 tacgggattt ttccagccaa tacttcgtcg ttggcttttt tcatcctttc gacagcccag
     1741 ggcttcagaa tgggattggt gagatccgcg attcgatagg tcggctgaac gccgcggccg
     1801 tttggaatat agggatggtc tttggcggac atcaccggcc ccggcccgtt aagcggcggc
     1861 agaaaatcgt cacccgtagg gcgatccgga atccaggccg tgctgctgtc aggcgcgaag
     1921 tcgggcactg cgcccattgc ttcgacggca agcgctggtg aacaggcggc tccgacgctg
     1981 agatatccga acagcgtgct ggcggccaat acagatttcg acacgaaatt tgccgattgg
     2041 gacaacacgc tctccctcgt tttcttgcag ccgactggct cagaaatccg gccggtccgc
     2101 ggtcggcgtc gggacgccgt atttctgaaa ataattggcg ttgttctcgt tgcatggcgt
     2161 ctcagagagc gggccacgat ccacccgccg ccagcgctgc gtggccgacc acggtatggt
     2221 gaaagcgccc ggatcgtcca ccgtgacgga aatctgcact ctgctgccgc cctcagtcag
     2281 cttcaggcgt tcaacgacgt gaagctctgt ggtgtgcggc gtgcggtagt tatcgacaaa
     2341 ggtcttgtcg gtgatcccga tggtatcaat gaccagcgtg tcgtcacctt catagtggcc
     2401 gatcgattca ccataccagg acggcttcgg gtcggcggag tgcggcacgt tcatgagaat
     2461 ttgccgcact tcgggaccgc ccggattgat gatcgtcacc ttgtgcggcg tttgaaggaa
     2521 atagaacccc tcgatgagcg aatagatcac gaagccgggc acgccgatcg gccagcacct
     2581 ctcccgcgcc cggaatggaa ccttgcccgc cagcacctcg tcgttggcgc gccgcatccg
     2641 ctccctgatc caaggctgca ggatgggatt ggtcagatcg gcgacccggt aggtcggctg
     2701 agcgccgcgg aaattaggaa tatagggatg ggccggatcg aaggtgatgg ggcccgggcc
     2761 cgaggaaggc ggcagcaggt cgtcgatcgt ctgatctaac gcccaggagg tgtggctgtt
     2821 cggcgcgaaa ttggggatcg ggctttggtt tggcggcgcc gcaagtgccg ctaccgcggt
     2881 cgctgcccac agtgagacga ccagagccgc gcggatcgcg ttcgttgcga cgaacatcga
     2941 gcccatcgaa tggccgctcc ggcctatgcc aagcgatgac ccgagcccgc caatgtcgcc
     3001 ctcatggccg gcgcacaccc gccaccgagg acaagtcgcg gtgcggctcg ccgcagacgt
     3061 agtcttcaag acggacgtca ttacgcaaat tgtagacgaa tcgcgcctgc caatccctgc
     3121 tgtaatattg gggatcatga atggtgatga cgttctcgat ctgggtcgga ttgattcggc
     3181 gaatgcgctc gagcgttgtc atctcgtcgg tgtgtggggc gccggtggcg tcgatgaatg
     3241 tcttttcgtt gaagccagcg gtgtggatca ccagcgtatc gccctcgaaa tgaccgaccg
     3301 agtgaccgtt gtagaacggg aatgtggtca gctccctcac agtgggcatc ggcttgccca
     3361 tagcgaccac gcggacctga tggttgagtt catggatgat ggttacttgc ccgggcggcg
     3421 cctggatgat ctcaaacgga tacggtgtgg caagcacgcg gggcaacccg tcgggcacac
     3481 agaattttct ggcggtatcg gtgatcgagc cgtccttgag gcccgccatg ttcttttcat
     3541 aggcggcctt gccggccggc gttaggggca ggtcgccgcc gccaacgatc tgaattttag
     3601 cgtgatattc ggttgcccaa taggttccgg aaatatccgg cgtttgggca cgggctggaa
     3661 cggaaagaac cgatatcgca agcagcgccg tcaacgtcga gccagcacca gcaaaaaccc
     3721 aaaagattcc catctgcccc tcccgattaa atttatcgac cgacccgctg catcgaagca
     3781 aagtcacggt tccggtcctc aacgctagca tcccgtgcgg ctggaaaaaa gggccacact
     3841 gctgtcagcg aaaatccggg attccaccac gcgaaaaacc tgaaccggtt gcaagagacg
     3901 gcatttgaac gcaccactcg tgacttcaaa ttatttcgag cgagagattg aagaggctgg
     3961 taccaacgcc gaaatcccct taaaataagg tgttgtaaaa atcagtggga gacgccaatg
     4021 aaatcccgaa cgctcggcct cgccggtatc gtggtagcca tgtcggcaat tccggcggtt
     4081 gcgcatcact cctttgccat gttcgacgcc gaaaagtcca aaacgctgga aggcaccgtc
     4141 aaggaattcc agtggaccaa tccgcacagc tggattctgt tgatggtcaa caatgaccaa
     4201 gggcagccgg aacaatgggc gatcgagatg ggtggccccg gcggcttggc gcggcagggc
     4261 tgggttccca agacgctcac gccaggcatg aaaatcaaga cggtcatcca tccgcttcgg
     4321 gacggaacca atggtggcca gtttatggcg gtgacgcttc ccgatggaac cctgatgggg
     4381 aatccgaacg ctgcgccgag cgccaatgcc ggagccgccg cccccaatca gtgagccgat
     4441 gctagcggat cattcacagc cgctcgcagc ggcgtgactt tgccggaatg gcgccgttcc
     4501 gatgatcacg gaacggccgg ccggtgtggc gatcggtcat tttgccatcg cgcatttgtg
     4561 cggtcgaggc cacgaagccg ttgccgctgt cgcgcgagta ttcgcgagaa cagcaggaga
     4621 aggttagtgt gcggcccggc gttgaaactc gcgtttggca cccttgtgag ggtccttgtt
     4681 gtcaatgtgg tttgcaccgc cgcagcgctg tggccggcgc tcggcaccga agccggaaag
     4741 gtcccgaatt ttgcccccga cagcttgact ggctggcagc tcctggacga cgagttcatc
     4801 ccaccgccta gcggagccgg cccgatcctg tccgatccgg tccatccgta cctgagcttt
     4861 tacaggtttc cccgcaaccc gaagccgtca ttccgcgttg cggacttgag caacccgatc
     4921 ctgcagcctt gggcccggga gcatctgcgg aaggtcaatg aacgatcgtt gtccggcaag
     4981 gtcgtggcga tcccgaagga gaggtgctgg ccagttggcg tgccgggctt tctgctgctg
     5041 cccgcaacgc cggtgtattt tctccaaacc ccaaagcagg tttcgatgat ctggatgcag
     5101 aaccatcagg tacgccgcgt ctacttggac gtaccgcatt cggcgaacgt gaacccgtca
     5161 tggtatggtg agtcagtcgg tcattacgag ggcgacgctc ttgtggtcga cacgatcgga
     5221 atctccggca aatcctacgt cgacaactat cagacgccac acaccgacca gttgcatgtt
     5281 gtggagcgct tccacatgat cgaagatggc aagtcgctcg aggtgaatgt ccacgtcgaa
     5341 gaccccggtg ccttcacgac accatgggat gcgatccagc gttatcggcg cacggaccgc
     5401 agcccgctga gcgaagtcgt ctgcgccgag aacaacgatg atcattttcg ccaaggcctt
     5461 gagccgatgc cgcaagcgga caaaccggat ttctagcccg tgtgattcta gcaaccgaac
     5521 cccacatgcg ccggatcgcc tttcttcttg tgttagcttt tgttgccagc cccgcgaccg
     5581 cgcagagttg gaaggaatac gcctatccgg cggacgcctt ctcggtcgca tttccggccg
     5641 accctaaaat cgagaccacc acgtaccaga ctgccgatgg tcgcccggtt gaagcgcgcg
     5701 tctattcggt gtcgcaggac ggcggtgtgt tcaagatgac agtcgccgat ctgccggatc
     5761 ccaccatgca ggaaaacacc gtgttagacc atgcggtgcg gatgctgtcc caaggcgccc
     5821 agatcacggt cgacattccg caccgcatca gccgtgtata cggccgccag ctcagcttag
     5881 cggcgccgga cggcagccgt tcgtcgatcg cagtattcta tcacaagcag cgactctatc
     5941 agatcgaggg aactgtgctt cccacaggca ccaacgcaac gtccgacgcc attcgattcc
     6001 agcaatcgct ggtcttcacg gacgattcga caaaccggtg accggggtcg gtcggatcgc
     6061 taggtcatat tgatggccgg gtctttcttg gctgaaactc ggcaaaaaag acgtggatgc
     6121 ccgcaacaag cgcgggcata acggtacagg ggcgattcaa ctacgtcgga acgcggtcat
     6181 gccgccgcga ggtcatgctc tatccggccc tccgcgacga gctgcttgca attgatgcgg
     6241 gcatcctcgc gcgctgcctc cgtggcaaag cggcgaagca ggatcatgag cggttcgatg
     6301 tcgcccagat cgcagcgctc gcagctggta agggcgcgct ccaccatgcg ccgcttgagg
     6361 cggctcatgc cgaatatctc gccgttgtga tgcgcctccc gagccgctga cagagcttcg
     6421 cgaaacccca cataggtcga ggcgggcagg ccggccttgt cgaatacggc gcgaaatcca
     6481 gcattgcccc gatcatggac aagcgcttgc acacgccgca acggcaaacc ggtaagctct
     6541 gcgagcgtgt cctcgaacat cgccatgttg cccgacagca gggctcgcag catcaggccg
     6601 gcagtaagtt gtccgctctc gcgcaaatga cggattagcg cacgggtatc atcaccgggg
     6661 cggagcgccg cgatggcgat ggtcgccttc tcgcatgctt cacggcccac ctcctcggca
     6721 cgatcacgct cgagccatgc gcggtcggcg acgaagcggg ccaacgcgcc ggacaattgc
     6781 cgcactagcg attgacgtgc tgcaagcggc agatcaggtc gcgcgaacaa cgactcgcga
     6841 atagcgccga gatggccgaa ccgatcgatg atgcgggcaa tcgaggacgg ggcgacatcg
     6901 gcgcaaggat tttcaatggc gaccaagcag gcttcggcgc tgcccacctc ggcgaccgcg
     6961 gccgcgaccg cacgctgcag cggcgcacgc gccgcgatgg cggcttggag ggtgccgttg
     7021 cgggttgcca cgaggtcgac gagatcagcg tcgatcagca acggcgaacg cgccagcacg
     7081 atcgccgcga catcacaatg gtcggacgca agcgcatgaa taaccgcatg gggcgcatcg
     7141 ggactggcgg caagtccctc ggccagtgcg cgtcggacca gcggcgacgg gtcatccaga
     7201 agcgtgatca tggcgctttc ggccgcggcg cgatcatcgg gtgagagatc ggaatacaaa
     7261 taggcgcgcg ccaaggcgcg ggtcgcttcg gcacgctcgc cggccgaggc ggtgcggacc
     7321 caatgaagaa accgcctaat gatcatgatg caaccattct gttgcaatga aagcggcttc
     7381 gcattttcag cgaaaccaga aatcgctttc gttttgcgca tcttacgccg cttcttcacc
     7441 ccccaccggc cttcgcagga attggtctgc gcacgccggc tcgaattacc gaactaccca
     7501 caagggtgcc gatcgacccc agtgtaggtg gcgaaactta acaaaaggtt caccatgaat
     7561 tttcaccaag gcgaaaggtt tgcgatgtgc gcgactggga gcagctttcg tcccctgcag
     7621 gcgcgtcgga ggagaaggaa atggagcggc tactggcccc tagcgaccga acaggctcga
     7681 acggtctgtc gactgcgaca ggaacggttg ttcgctaccg ctcgatgaaa ccagggacgc
     7741 cgcgcgggat ggtgccgcgt cgccggacag ccgcacacgc ggggcccaca agtcttggac
     7801 gccacgcgac actggatcgc tgcggtcgct gaatagaccg ctgaacaggg gcgccgattt
     7861 ctgccccgcg acatccgggg ctgcgttgga gtctgccacg gcaacgggcg ccgaccgcgg
     7921 accgatcgcg ggcatgccgg gaacgatcgt cagcggtgcc cccacggaca cggcggcagc
     7981 tgcggacgcg cctgcgacgc gcgcggtttc ggcggcgcga ttgaacggat ttagtttgaa
     8041 tgacgatgca gccgggttgc gagcgccgtc gaagcggccg accaacacgc cgtagacatc
     8101 taggacgctg cgcgggcggc ccatgcggtc atagaaaatc gcacgattag tatcggctgc
     8161 tgctggaaac gccgcatccg ccggggcacc tggattggac acagcgagcg atgtcaactt
     8221 gatggctccg gcggcaccga gcacgtgtgc gatgtagagt tcgccgtcgc ttgccttgcg
     8281 gccgaggccc tcagcgagcg ccgccgcgtt gtcccgggtg taggcgcccg ccatggccgc
     8341 gttggcggtc ggatcgaacc gcagtgccat gatgtcacga cgcattgcgg gatttggtac
     8401 gtcgaaatga ccagatccat cttgaacgat ggcgtcggcg tatttgccat agccgagagc
     8461 cgggccggcg cgcttcacgg tgccaaacca ggtctggtcg atgaactgat agagccctcg
     8521 cgccgaggag ctcggtgagg ctgcttgcgg gttgagacca gattcggcct gcgcggcggc
     8581 aagcaaatac tcgaagctgg cgccggtcgc agtcgcggcg ctctggattg caccgttgac
     8641 gctttgcggc cgaggcccgc cgaatatgcc gccgatatcc atgctgcgcg tgctgcgtcg
     8701 agtcacggcc cgcctgcctg ggccgaccgc gttgccattc tgcagcatcg gcatttatgg
     8761 taaacaaagc gttaacacgc ggctcgaaac ccaccgttgc ttccctttcc ctcgcttgtg
     8821 ggcaagggct aagatagtaa ttttgtaatc tacgcgaatc tgtgcaattc cctgcaatat
     8881 ggagaggatt cttgacatca acgcggcagc ggacgtgctg ggcgtgtcgt tttcgacgct
     8941 gcggggcccg caagagccgc gtgagccagg cctcgaagaa gcaggaacca acggcattgg
     9001 cgagctttgt ccagcttagc tcaactttgc gtaggtttcg gagagcggca agtaattgcg
     9061 tccgaggatt tgattgaagg aggttaattc gcggcagcct aagcttgtgg taattatcgc
     9121 ccatttaggc ggcaacgggc caccgcaaaa ctggcgccga cgcgtggtcc atcctacctg
     9181 tgtacaaacg ccggcctggt tgttttacaa atcgccgtgt cggagatact ctgactttca
     9241 tgtcagagtc gttcgaaact cagcgaaaca tttgggcaca gctcagcatc agcgcttgcg
     9301 cattgctgct gccgccgata gccctcggcg ctgccgtttt ttccatgctg cccgcgcgtg
     9361 acgatggcgc ggagcgtctt gccgccggcg cggctgccga ggcgcaagag gcaacgtcca
     9421 aatcctgggt ccaggcggtg caagcgcggt ccgtcaaagc ggattcacca cctgcaactc
     9481 atgagaacgc ccccctggct gcgagcaagg cggcctcaga tggacgttcg gtatcctcgg
     9541 ccaacgcccg ccaggaggcg gtcagcaaga aggatatggc gcgggtcttg agttctgttc
     9601 cggttcgcgt cacagtcgtg acgccgcccg cagctgggaa tccgtcccta gcgatagatg
     9661 ttgacagcgt ctcaacgggc gcgattggcg tgcagccgtg gcagtccacc gccgtagaga
     9721 caccaacggc ccttttgccg cgcgcactca ctccgcccgt ccaagtggcg cccgtccaag
     9781 tggcgcccgt tcaactggtc cctcaactgt cggccactca aggtgcggcc actcagatgc
     9841 ccacagcgga ccgttcatcc gccgaggggc gacctccgcc agcatcgaca acgcgtaagc
     9901 gtgctcagct ttcctatctg aggactctcg cgggacgcag cggagcacgc gctgacgcac
     9961 ggggcgagac gcaggccgtc caccgcaatg cccagccgca gcagacgttt tcgctgaaag
    10021 attggctgca aaagcttggg acggcgccgc gcgacccgcg cagctagagc ggatttcgat
    10081 cgactggacc aacaacgttc ggcgggcaaa gccaagcacg ccgccgcgca ggaattcttg
    10141 cgggggggca ggctttgccc tccccggaat acttgcgaac acttccgttt tgggccgcaa
    10201 tcggtgtatt cttgcgccca caaaaaagcc ggcgcttgtt ttagtacgat gagtatccgg
    10261 gctttgtgcg cggcgtgccg cgagggagaa aatcacatgc ccgatcaagg cggtgctgca
    10321 acgcgtgctt ctgcgaccac cgcgtcgtcc gtggcggcgc tcctcgtgtt cattgcaggc
    10381 gccgtcgcct tcgaccaatc caaatatccc gattggggcg gacagtggaa gcggccgcgc
    10441 ggcgtggcaa cccaatggga ccagaccatg ccttccggac ttgcccaaca ggcaccactg
    10501 accgctgaat tcgaaaccaa actagaggcg agcatcaagg atcaagcgac cggcggccag
    10561 ggcggagaca cccacgtgtc ctgcctcacc aacggcatgc cacggatcat gactgcgacg
    10621 tttccgatag cgttcgtgat tacgccggct gttacctata tccattttga ggcttttatg
    10681 ccgcgtcgca tttacaccga cggtcgtgaa ttcccgaaag acgaagagcc gagctaccaa
    10741 ggctattcta ttggcaaatg gctcgatacg gacggcgatg gccgctacga cacgctcgaa
    10801 gtggaaaccc gcaatttcaa agggccccgt acctacgaga acagcggcct gcctctgcac
    10861 cccgataatg agtccgtcat ccatgagcgg ctctctctcg acagggacaa cccggacctc
    10921 atgcacaatg agatcacctc aattgaccat gcgttgacgc gaccatggac gatcaccaag
    10981 acctatcggc gcgaccgcaa cgagctgtgg caggactaca attgcggcga ggccaacaat
    11041 catgtggtga tcggtaagga aaattatttc ctttccggcg acggcctcct gatgcctacg
    11101 aaaaaggatc agccgccgcc ggatttgcgc tatttcaaac agaccgggaa gtgaggcgta
    11161 aaggctaagg atggacgcgt agcctggatt gaacgcagcg aaatccggaa gcggcatttc
    11221 agatggagaa gccggcctcg aggtgacgta atgcttgacc gaaacccgat cggtgtcctc
    11281 gcgcttattg tcacgctcgc ctcgtcggcg acctccgccg atgccttcga cgacgcaaaa
    11341 tatcccgatt gggacggcca gtggcgtcgg ccgcgtgggc tagcaaccca gtgggacccc
    11401 accaaaccgc ctggtcttgc ccagaagccg ccactgatag cggaatatca ggccatcttc
    11461 gaggcaagcg tcgccgacca agcgaacggc ggacagggag cggacctcca tgtcaaatgc
    11521 atcaccaa
//
LOCUS       DATILV010000193         3413 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4133118, whole genome shotgun sequence.
ACCESSION   DATILV010000193 DATILV010000000
VERSION     DATILV010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3413)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3413)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3413
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4133118"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1367)
                     /locus_tag="VLJ17_04395"
     CDS             complement(<1..1367)
                     /locus_tag="VLJ17_04395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011155765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HSV22250.1"
                     /translation="MNAPVNLPMRAPDRKASAGLIFRLALRELRGGMRGFYIFISCIA
                     LGVAAIAAVGSFANGLAEGLAREGRVILGGDVAFSLIQRETSTAEHAFLSSRGELSST
                     ATMRAMARTTDGRTALVELKAVDSAYPLYGSVVTEPAADLPTLLARREGAFGAVADPA
                     LLTRLDLRPGAQLTVGDAAIELRAALAGEPDKLASGIGFGPRLLISEEALRATGLLRP
                     GSLVRWLYRLRLPANLAEDAVTQTIEAAKAQFPEAGWEIRSRNNAAPQLERNIERFSQ
                     YLTLVGLTALLVGGVGVANSTKHFLDRKRDVIAIMKSIGATGSRVVAINFVEVMMLAS
                     IGIIIGLVVGAALPFGAAIVLHSIIPLPLAPALYPDQLALAVTYGLLTAATFSLWPLG
                     RAHDVPVSALFRDQIAPQRRLPRVRYLVAVVVAAAAFAVLGVAAAFDRKIATIFIVAA
                     LTVFG"
     gene            complement(1364..2077)
                     /locus_tag="VLJ17_04400"
     CDS             complement(1364..2077)
                     /locus_tag="VLJ17_04400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV22251.1"
                     /translation="MDDTSTAMGPLIPAISLTGVNLSLGQGAARVHILKNVSLDIGRG
                     EAVGLVGPSGSGKSTLLMVIAGLERPDQGRVTVAGQDIGSFDEDALARFRGRQIGIVF
                     QSFHLIPTMTALENVAVPLELAGASDAFGRAMSELEAVGLGARTAHYPAQLSGGEQQR
                     VALARALAPNPAILVADEPTGNLDEATGREIIDLMFARFSAQAMTLVLVTHDAPLAQR
                     CDRVIRLRSGHVEEEVATA"
     gene            2154..2807
                     /locus_tag="VLJ17_04405"
     CDS             2154..2807
                     /locus_tag="VLJ17_04405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015857352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HSV22252.1"
                     /translation="MKIVGLAAIVTVFGVIGAGTTYSPAAERAINIVAFGDSLTAGYG
                     LPANEAFPAQLQRALDAKGLAVKVVNAGVSGDTAAGGLSRLDWSVPDGTDAVILELGA
                     NDALRGFDPEITRKALDTMLRRLKERKISVLLCGMVAPPNLGAEYGRAFNSIFPDLAA
                     ETGAILYPFFLSGVATDPKLNQRDGLHPTAAGVAVIVDRILPQVEHLIARAKASHAP"
     gene            2929..>3413
                     /gene="thpR"
                     /locus_tag="VLJ17_04410"
     CDS             2929..>3413
                     /gene="thpR"
                     /locus_tag="VLJ17_04410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008143563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008664 - 2'-5'-RNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2',3'-cyclic phosphodiesterase"
                     /protein_id="HSV22253.1"
                     /translation="MPRLFTALEIPSEVGQSLALLRGGLPGARWVAPENYHLTLRFIG
                     DIDDALAEEIADLLGKVERPAFDLRIEGLQSFGGNKPRAVVAAVPAVAQLVELQADHE
                     RIMQRIGLQPERKYKPHVTLARLRDTSSRQVADFLSTRQPFRSSSFPVSRFVLFSSRA
                     SV"
BASE COUNT          675 a         1076 c         1027 g          635 t
ORIGIN      
        1 atgccaaaaa ccgtgagagc ggcgacgatg aaaatggttg caattttgcg atcaaatgcg
       61 gccgcgacac ccaataccgc gaatgcggcc gcggccacaa cgactgcaac gagataacga
      121 acgcgcggca gacgccgctg cggcgcgatt tggtcgcgaa acagcgccga aaccggcacg
      181 tcatgggcgc ggccgagcgg ccaaagcgaa aatgtcgcgg cggtcaacag gccatatgtc
      241 acggcaagcg ccagttggtc tggataaagc gcgggtgcaa gcggcagcgg aatgattgag
      301 tgcaacacta tcgcggcgcc aaacggtaag gccgcgccga caacaaggcc gatgatgatt
      361 ccgatcgagg ctaacatcat cacctcgacg aaattgatcg ctaccactcg agaaccggtg
      421 gcgccgatcg acttcatgat agcgattaca tcgcgtttac ggtcgagaaa gtgcttggtc
      481 gaattggcga ccccaacgcc gcctaccagc aaggccgtca acccgaccaa ggtcagatat
      541 tgcgagaatc gttcgatatt gcgttcgagt tgcggagctg cgttgttgcg gctacgaatc
      601 tcccatcccg cctcgggaaa ctgcgccttt gcggcttcga ttgtttgtgt gaccgcatcc
      661 tctgcgaggt ttgccggcag ccgcaaacga tagagccacc gcaccaggct gcccggtcgc
      721 aacaatcccg tggccctcaa tgcttcttcg ctgatcagaa gtcgaggccc gaatccgatg
      781 ccgctggcga gtttgtccgg ctcgcccgcc agtgcggcgc ggagctcgat cgcggcatct
      841 ccgaccgtga gctgtgcgcc cggccgcaag tccagccgtg tcagcaaagc cgggtcggct
      901 accgccccaa aggcaccctc gcggcgggcc agcaatgtgg ggagatcggc agcgggctcg
      961 gttacgacgc tgccgtaaag cggataggcg ctgtccaccg ccttgagctc cactagagcc
     1021 gtgcgcccat cggttgttcg agccatcgcg cgcattgtgg cggtgctcga caactcgccg
     1081 cgggagctga ggaatgcgtg ttcggccgtc gacgtctccc gttggatcag cgagaacgcc
     1141 acgtcgccgc cgaggatcac ccgaccttcg cgcgccaacc cctccgcaag accattggcg
     1201 aacgagccta ccgccgcaat cgccgcgacg ccaagcgcga tgcaggaaat gaagatgtaa
     1261 aaaccacgca ttccgccgcg cagctcgcgg agcgccagtc gaaatatcag gccagcgctg
     1321 gctttgcggt ccggggcccg catcggcaaa ttcaccggag cgttcatgcg gtcgcgacct
     1381 cttcctcgac gtgcccggaa cgcaggcgaa tcacgcgatc gcagcgctgt gccagtggcg
     1441 cgtcatgtgt gaccagaacc aaagtcatcg cctgagcgga gaagcgcgcg aacatcagat
     1501 cgatgatttc tctgccagta gcctcatcga gattgccggt cggctcgtcg gccaccagga
     1561 ttgcgggatt gggtgccagc gcccgcgcaa gcgcgacgcg ttgctgttcg cctcctgaca
     1621 gttgggccgg gtagtgggcc gtgcgtgcgc caaggccgac cgcctcaagc tcgctcatgg
     1681 cgcgcccgaa tgcatcggag gcgccggcca gctccagcgg gacggctaca ttttccaatg
     1741 ccgtcatggt tggaatgagg tggaaggact ggaacacgat gccaatctgg cgaccacgga
     1801 aacgtgccaa cgcgtcctcg tcaaatgagc cgatatcctg gccggcgacc gtcacgcgac
     1861 cctggtccgg tcgttcgaga cccgcaatca ccatcaacag cgtcgacttg cccgatccgg
     1921 acgggccgac gaggccgacc gcctcgccgc ggcctatatc aagagacaca ttcttgagga
     1981 tgtgaacgcg cgcagccccc tggccgagcg agaggttgac gcccgtcaag gatattgccg
     2041 gtataagggg ccccatagct gtcgaggtgt catccatgtg gtttcagttt tcgcgccagg
     2101 ttcggaatcg ttcggcacgg ccgtcgtggt catatgggga attcccccga cgaatgaaga
     2161 tcgttgggtt ggcagctatt gtcacagtgt ttggcgttat cggcgccggc accacatact
     2221 caccggcggc cgagcgcgcc atcaacatcg tggcgtttgg cgattcgctt acggccgggt
     2281 atggtctgcc cgccaatgag gcatttccgg cccaattgca gcgggcgctc gacgccaagg
     2341 gactggccgt taaggtggtc aatgccggcg tatccggaga cacggccgca ggtggattat
     2401 cgcggctcga ttggtcggtc ccagacggca ccgacgccgt catcctggaa ctcggcgcca
     2461 atgatgcgct ccgcggtttc gatcctgaaa tcacccgcaa agcattggac acgatgcttc
     2521 gccgtctcaa ggaacgaaaa atttcggtcc tgttgtgcgg catggtggcg cccccgaatc
     2581 taggcgctga atacggccgt gccttcaact ccatctttcc ggatctcgcc gccgaaaccg
     2641 gcgccatctt gtatccattc tttctctccg gtgtcgccac cgatcccaag ctcaatcagc
     2701 gcgacgggct ccacccgacc gccgccgggg tcgctgtgat cgtcgatcgg atattgccgc
     2761 aagtcgagca tttgatcgcc cgtgccaaag cgtctcacgc tccgtgaaag gcgctggcga
     2821 gcatgccagt tgcattgcgt cagaaaatcc tcacataaca gaaaatcatc acatcgctga
     2881 cataacagca aatcctcaca taaaggtgat tcgctacaga tttcggccat gccccgcctt
     2941 ttcactgccc tcgagattcc ctctgaagtc ggacagtccc tggcactctt gcgaggaggc
     3001 ttgcccgggg cccgttgggt cgcgccggaa aactaccacc tgaccctgcg ttttatcggc
     3061 gacatcgacg atgctttggc ggaggaaatc gccgacctgc tcggcaaggt cgaacggccg
     3121 gcattcgatt tgcggatcga gggactccag tcgtttggcg gcaacaagcc acgtgccgtc
     3181 gtggctgcgg tgccggcagt ggcgcagctg gtggaacttc aagccgacca tgagcggatc
     3241 atgcaacgca ttgggctcca gccggagcgt aaatacaaac cccatgtgac gcttgccagg
     3301 ctgcgcgata cgtcgagccg ccaagtggcc gattttctct cgaccaggca gccgttccgc
     3361 tcgtcgtcat ttccggtgtc gcgcttcgtt ctattttcct cgcgcgcttc tgt
//
LOCUS       DATILV010000194        13549 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1580073, whole genome shotgun sequence.
ACCESSION   DATILV010000194 DATILV010000000
VERSION     DATILV010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 13549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13549
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1580073"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1010)
                     /gene="ispG"
                     /locus_tag="VLJ17_04415"
                     /gene_synonym="gcpE"
     CDS             complement(<1..1010)
                     /gene="ispG"
                     /locus_tag="VLJ17_04415"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HSV22254.1"
                     /translation="MNVVATAATAAPLSRHKTVPVRVGGVTVGGGAPIVVQSMTNTDT
                     ADVEATTSQVAALARAGSEMVRITVDRDAAAAAVPHIKERLLRMGVTAPIIGDFHYIG
                     HKLLADHPACAEALDKYRINPGNVGFKEKKDRQFGAIIDMALKHGKPVRIGANWGSLD
                     QALLTHLMDENAKLPQPADMRAVTREAMVQSALMSATRAEEMGMPRSHIILSAKVSAV
                     QDLIAVYIELVRRSDYAIHLGLTEAGMGSKGIVASSAAMGILLQQGIGDTVRISLTPE
                     PGGDRTVEVKVAQELLQTMGFRVFVPLVAACPGCGRTTSTTFQELAGEIQDFIHRSMP
                     EW"
     gene            1259..3280
                     /locus_tag="VLJ17_04420"
     CDS             1259..3280
                     /locus_tag="VLJ17_04420"
                     /inference="COORDINATES: protein motif:HMM:NF028467.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MASE4 domain-containing protein"
                     /protein_id="HSV22255.1"
                     /translation="MVRRVVAERPVFLSTAPAERGDRRLALVVVVLSSLVFLGLAPFA
                     RQPLPQVWAFIPIYESAVTISDLITAAILFIQFNILRSRALLALACGYLFTGLMVIPH
                     MLTFPDLFSPTGLLGAGSQSTAWLYMFWHGGFPLTVISYALLKDRDDAAGLPGESARP
                     ALLMCVGATLGAVVGLTLLATTGEALLPTIMMGHKMTAALTGVILTIWILTLVALLIL
                     WLRPSHAVLDVWLMVVMSVWLFDMALSALLNAGRFDLGFYGGRAYGLLAGTFVLLILL
                     LETGALYAQLARLFEVERTERRHQAEERRRIFETSLDLILVVDREGTILRVSPSSRAI
                     LGYEPIDMGGRNAAEFVHPDDLDAIRDEMRHARLGHLIRDFATRYVHNDGHIVTLAWS
                     GVWSEPEQRHFLIGRDVTEQKRTARMKDEFIATVSHELRTPVTSIAGPIGLLAGGAAG
                     ALPDSVKRFVTMAQNNCNRLVQLLNDILDLEKIEAGGMTLNFQRVELKRLVEQAIDLN
                     RALAEKYGVPVRLDTDATNMAVRADSERLMQVLTNLLSNAVKFSPPGEEAVISIEPRD
                     NHVRIAVRDHGPGIPVEYQTLVFEKFAQIDGTDARQKGGVGLGLSIVRQIMIRLGGSV
                     GHTAASSGGTIFYVDVPLWTEESVPERTSDAQDPLADQPDQRPVRGSAA"
     gene            complement(3288..4625)
                     /locus_tag="VLJ17_04425"
     CDS             complement(3288..4625)
                     /locus_tag="VLJ17_04425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HSV22256.1"
                     /translation="MLWFRKVVTGAAVGAAFFMLGLNSGHTQAGPTGTPAPSAEISRQ
                     IELLSKVLGIVRSDYVDKPDDEKLVAAAVDGIVKSLDPHSSYMDAKSYRDMQTTTSGQ
                     FGGLGMQVNMEDGLLKVVSPIDDTPAARAGILAGDVIAQVDGMPVKGMTLAQAVEKMR
                     GTPGTEVRLEIMRKDRSAPLNLTLTREIIKVSAVRQQLEGDDVGYVRITQFTGRAADE
                     LKQAIEAITAKTPPEQIKGYILDLRNNPGGLLDQAVRVAGAFLISGEIVSIRGRDAAQ
                     VQRFNAVPGDLIDGKPLIVLINGGSASASEIVAGALQDQKRATIIGSRTFGKASVQTI
                     IPLGPGNGALRLTTARYYTPSGHSIQAQGIAPDIEVFQDVPKEVAAQLQTRSEANLPG
                     HLKAEGDEQTGSQAFVPRDRNDDKALQTALALIRGTATNPAFPPNPKQAASVH"
     gene            4851..6005
                     /locus_tag="VLJ17_04430"
     CDS             4851..6005
                     /locus_tag="VLJ17_04430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HSV22257.1"
                     /translation="MTSATSIDIHTRADSLVAAFARAGYQRVSPAILQPAEPFLDLSG
                     EDMRRHMYLVTDATGREFCLRPDLTIPVARDYLASTVAAQPAGFCYLGPVFRDRGTAS
                     GEFLQAGIESFGRADKAAADAEALALGIVATSRYGLAAPRIVMGDVALFVALIAALDL
                     APAWKRRLLKDFNRKTTLAQDLERLTLASRQKRSEYHGVLAALANANPKAAQALVTDL
                     LSIAGKTAVGGRSIGEIADRFVEQAELGASSALPSETCALIARFLDITGAPPSAAAAL
                     RALAGEACISLNGALDLFESRIGLLAERGVDVDRIEFATAFGRGVDYYSGFVFELHDP
                     AGRVDGQLAAGGRYDVLLSRLGSPQPVAAVGFAAWIERLEALATHSGEKP"
     gene            6002..6970
                     /gene="hisG"
                     /locus_tag="VLJ17_04435"
     CDS             6002..6970
                     /gene="hisG"
                     /locus_tag="VLJ17_04435"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HSV22258.1"
                     /translation="MSMLILAVPAKGRLQANAEAFFDHAGLELVKPRGARDYRGAIAR
                     LDGIEVAFLSAAEITEQLADGAVHFGITGEDLVREMIPAADDKVVLLEGLGFGHANVV
                     AAVPEAWIDVRDMADLDDVAISFRSKHDRRLRVATKYINLTRGFFSHHGIIDYRIVES
                     TGATEGAPAAGTAELIVDITTTGTTLAANGLKVVEDGVILRSQANLVAARGATWGKME
                     LEIARLILDRISAQARARLFREVRTRFSGWNDVLHGLAREKFGVTTPFGGPTSSELLT
                     LHCPPDAVHGLASFLRQHGADTVTVASIDYVFTRDNPLFAKLVAAL"
     gene            complement(7313..7894)
                     /locus_tag="VLJ17_04440"
     CDS             complement(7313..7894)
                     /locus_tag="VLJ17_04440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GtrA family protein"
                     /protein_id="HSV22259.1"
                     /translation="MLSKTKLPIDRLRARFPRATALVEPHFDMLRKAISFALIGVVNV
                     GVDTTVFLLVYSYLKSHEGALRPLELLALWCACTSRDTLLLITANIIAWVVAVSGSYM
                     MNSFITFAAESGRRLRWLDYGTFVASGILGAIASTTALVIAAHFMPVLPAKGCAILTA
                     FVVNFSMSHFVVFRPRRAAAEDSQGAFRPTELG"
     gene            8035..9102
                     /locus_tag="VLJ17_04445"
     CDS             8035..9102
                     /locus_tag="VLJ17_04445"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSV22260.1"
                     /translation="MAPDQRAPQGRDNFATVARRDPVGSAGLSIVVPVYNEAAGLAQL
                     HAHISEIAAKLHTRWGLACEVVYVDDGSGDASLDVARGLPAIAADIQVVSLSRNFGKE
                     AALLAGLDHARRGAVLFMDADGQHPPALIEKLAAHWLNDGYDVVYTAKAHRENEPTLL
                     RLAVRGFYALINWGARQKIPADAGDFRLLSPRAALALRQMPERNRFFKGLASWIGFRQ
                     LRVDYEPAARTHGRTSWSLGSLIGLSVEGLTSFSVAPLRLAALLGTLLAAGALVFSVW
                     TLIETFVYERTVPGYPSVIIGIMVIGGVQLLMIGVMGEYIGKVLSEIKHRPAYFVAEH
                     TFKRAQDESGAADSATRDAAE"
     gene            9089..10003
                     /locus_tag="VLJ17_04450"
     CDS             9089..10003
                     /locus_tag="VLJ17_04450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008966855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ChbG/HpnK family deacetylase"
                     /protein_id="HSV22261.1"
                     /translation="MPRNSFVEASTARQVSCAAISGNAASQRLRKLWLCADDYGISPA
                     VNRAIQDLIARGRINATSVMVTAPSFSATEARALCGLGGPHRHAAIGLHFTLTAPFRP
                     ATRAYRPIAQDGAFLSLARTLAAGLVRRLDPDALAAEATGQFAAFQAAFGRPPDFIDG
                     HQHVQLLPQVSDAVLAAMKRLAPDAWIRQCGRSMPVRRRWSDPKGLLLDILSARLRAR
                     SAACGIRTNPAFAGTYNFTRAAEFEALFGSFLQSLPDGGLVMCHPGFVDAELQRLDRF
                     TNMREQEHAFFAGERFPALLAAHGMVLA"
     gene            10144..10947
                     /locus_tag="VLJ17_04455"
     CDS             10144..10947
                     /locus_tag="VLJ17_04455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2076 domain-containing protein"
                     /protein_id="HSV22262.1"
                     /translation="MTPQEQQLVADLFERLASLEGQRRDPDAERLIREGLGRAPNSVY
                     ALVQSVLVQDEALKRANARIEELEQAAAPPNESGGFLDTMRNAITGREPARASVPSVR
                     TGGQGSSGVWGPRPEASQPPPQVGYPQAGYPQAGYPSGAPMGGGSSFLGTAAATVAGV
                     VGGALLLNGIRSMMGGHQGFAGDYDRASAGAAHASSPWDSGGDRGGSGDLGRDAGLDD
                     IGGGRRAAAHDDSSRSGFFSDTAENESGDAPDDEFDVGDAGDSGDVDTA"
     gene            complement(11031..11540)
                     /locus_tag="VLJ17_04460"
     CDS             complement(11031..11540)
                     /locus_tag="VLJ17_04460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014492218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyryl-CoA dehydratase"
                     /protein_id="HSV22263.1"
                     /translation="MLPMPIVDLLERGRQLALRGERVSVLWQEPESLAFVARGREYRS
                     EFHINPSDEVMLMIKGEMRLHYRTPDGNEEIAVVPEGSTIYTPAGTPHSPRFPPDAYL
                     LVIERQRRPGEIDRFCWFCPNCDELLHEETAQVHDYRADPVSKAYAQFFGSEAHRTCK
                     ACGHVMPQP"
     gene            complement(11562..12428)
                     /locus_tag="VLJ17_04465"
     CDS             complement(11562..12428)
                     /locus_tag="VLJ17_04465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSV22264.1"
                     /translation="MAASAYLTRLTILTASLFCLIRIEAFTQPAAPEESPQQPGAKPE
                     MTESCPGLVASERPQVLPAAFRPTALAPNEARITYAGHSTFLIESPKLVRIATDYNDY
                     VRPPVLPDIATMNHAHSTHYTDRPDPDIKFVLRGWRPDGKPANHDVTYSDVHVRSVST
                     NIRDWNGGTERNGNSIFIFEVGSLCIAHLGHLHHTLTQQQLNDIGHIDILLVPVDGGF
                     TMDLEGMVEVIQAMKAPLMMPMHYFSTFTLRRFLERVNRQYEVEFAETPSLVVSKTTL
                     PSKGKFLVLPGH"
     gene            complement(12490..13491)
                     /locus_tag="VLJ17_04470"
     CDS             complement(12490..13491)
                     /locus_tag="VLJ17_04470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine kinase"
                     /protein_id="HSV22265.1"
                     /translation="MNSVRYDVLGLGNAIVDVITRADDDFLLKHAMRKGSMSLIDEAR
                     AAQIYDAMGPAVEISGGSAANTIVGVAGFGARAAFIGRVKDDPLGTVFAHDIRAAGVA
                     FDTAPSAAGPSTGRCYVLVTPDGERTMHTFLGAAQDLHPRDIDDEVVASAAITYLEGY
                     LWDPHHAKEAFRKAATVAHEAKRLVALTLSDAFCVDRWRDEFLHLLRSGTVDLLFCNE
                     AELHSLYQTADFDTAIAALRGDARRAVVTRSAKGCVVIEGAQATATPAFPVERVVDTT
                     GAGDLFAAGFLFGMASGFSDDRAARLGALAAAEIISHLGARPERSLRALAQENGLLK"
BASE COUNT         2501 a         4229 c         4239 g         2580 t
ORIGIN      
        1 ttccattccg gcattgagcg atggatgaaa tcctggattt cgccagcgag ttcctggaac
       61 gtggtggagg tggtgcgtcc acagcccgga cacgcggcga ccaacggcac gaacacccgg
      121 aagcccatgg tctgtaagag ttcctgcgcg accttgacct ccacggtacg gtcgccgccg
      181 ggctccggcg tcagcgaaat gcgcaccgtg tccccgatgc cttgctgcag caggataccc
      241 atggcggcgg aggatgccac aatgcccttc gagcccatgc cggcctcggt aaggccgaga
      301 tggatggcat agtcggagcg ccgcaccagt tcgatgtaga ccgcgatcaa atcctgcacg
      361 gccgacacct tggctgacag aatgatgtgc gaccgcggca tgcccatttc ctcagcccgc
      421 gtcgccgaca tcagcgccga ttgcaccatc gcctcgcgcg tcacggcgcg catatcggcg
      481 ggctgcggga gcttggcatt ctcatccatc aggtgcgtca gcagcgcctg atccagcgat
      541 ccccaattgg cgccgatgcg caccggctta ccatgcttga gcgccatatc gatgattgcg
      601 ccaaactggc ggtctttctt ttccttgaaa ccgacattgc cgggattgat gcggtactta
      661 tcgagcgcct ccgcacaggc cgggtgatca gccaagagct tgtgtccgat atagtggaag
      721 tcaccgatga tgggcgccgt cacccccatc cgaaggaggc gctccttgat atggggcacc
      781 gcagcggcgg ccgcgtcgcg atcgaccgtg atgcgcacca tctcggaccc ggcccgtgcc
      841 aatgcggcca cctggctggt ggtggcctcc acgtccgccg tgtcggtgtt ggtcatggac
      901 tggaccacga tcggagcgcc accgcccacc gtcacaccgc cgacccggac cggtacggtc
      961 ttgtgccgcg aaaggggggc ggcggttgcg gcggtggcga ctacgttcat tgcaaactcc
     1021 tgggcagcgc aaactcctgg gcagcgtcac cccagacata agccaggagc aagcccgcaa
     1081 caacatatgg gaatcatttc cgatgcaatt cagaataggg ttttgacgac ccgccacctg
     1141 atgatcgatc ttgccgcggc cttcaccaaa aattcattgc agcgcgcttt tactcgccat
     1201 ttgacaggat gtctcgcagc cagcgacccc agttccaacc ctcacggtgg agagacgaat
     1261 ggtgcgccga gtcgtcgccg agcgaccggt attcctttcg accgcgccag ctgagcgggg
     1321 agatcgcagg cttgcccttg tggtcgtagt cctctcatcg ctggtttttc tcggcttagc
     1381 tccatttgcc cgtcagccgc tgccgcaggt gtgggcgttc ataccgattt acgaatccgc
     1441 agtcactatc agtgatctga ttacagccgc cattcttttc atccagttca acatcctgcg
     1501 gtcgcgcgcc ctcctggcac ttgcttgcgg atacctgttc accgggttga tggtgattcc
     1561 gcacatgctt acctttccgg atctgttttc gccaacggga ttgctcggtg caggatcaca
     1621 aagcaccgcg tggctctaca tgttctggca cggcggcttt cctctcacag tcatctccta
     1681 tgcgctgttg aaggatcgag acgatgcagc gggtttgcca ggcgaatccg ctcgacccgc
     1741 gctcttgatg tgtgtcggcg cgacccttgg cgcggtggtc ggtctgaccc tgctagctac
     1801 aactggcgaa gcgcttctgc caacgatcat gatgggtcac aagatgaccg ccgcgctgac
     1861 cggcgtcatt ttgaccatct ggattctgac cctcgttgcg ctcctgattt tgtggctacg
     1921 gccgagccac gccgtactcg acgtctggct aatggtcgtc atgagcgtgt ggctgttcga
     1981 tatggcactc agcgccctcc tcaatgccgg ccgcttcgat ctcggtttct atggtggccg
     2041 cgcatatgga cttctggccg gcacttttgt gctgctcatc ctgctgctcg aaacaggggc
     2101 actctacgct caactcgcca gactattcga agtggagcgc accgagcgca ggcatcaggc
     2161 agaggagcgc cgtcgcatct tcgagacttc gctcgacctg atcttggtgg tggaccgaga
     2221 aggcaccatc cttcgcgtta gcccaagctc acgggcgatt ctcgggtatg agcccatcga
     2281 catgggcggc cgcaacgctg ccgagttcgt gcacccggac gatctcgacg ccatccgcga
     2341 cgagatgcgt catgcgcggc tgggccacct gatccgcgac tttgcgacgc ggtacgttca
     2401 caacgatgga cacatcgtga cgctcgcctg gtcgggggta tggtccgaac ccgagcaacg
     2461 acattttttg atcggtcgcg acgtaacaga gcagaagcgc actgcgcgca tgaaggacga
     2521 attcatagcg accgtgagtc acgaattgcg gaccccggtg acttcgatcg caggtccgat
     2581 cggtctcctg gcgggtgggg ctgccggcgc actgcccgat tcggtcaaac gcttcgtcac
     2641 gatggcgcaa aacaattgca atagattggt acagttactc aacgacattc tcgacctcga
     2701 aaagatcgag gccggaggaa tgacgcttaa ttttcagcgg gtcgagctaa agcgtctggt
     2761 cgagcaagcg atcgatctca atcgcgcatt ggccgaaaaa tatggtgtgc cggtgcgtct
     2821 ggacactgac gctacaaata tggccgtccg cgccgatagc gaaaggctca tgcaggtgct
     2881 aacgaatctc ctctccaacg cggtcaaatt ctctccgccc ggtgaagaag cggtgatctc
     2941 aatcgagccg cgggacaatc acgtgcggat cgcagtgcgc gatcacggcc ccggcatccc
     3001 ggtcgaatac cagacccttg tcttcgaaaa attcgctcaa atcgatggga ccgacgcgcg
     3061 gcagaaaggc ggcgtcggcc ttgggttgag tatcgttaga cagatcatga tccggctggg
     3121 cggtagcgtc ggccacacgg ccgcatcgtc gggaggcacc attttctatg tcgacgtgcc
     3181 gctttggacc gaggagtcgg tcccagaacg aacgtcagat gctcaagatc cccttgccga
     3241 tcaacctgat cagcgaccag ttcgcggcag cgccgcctga aaccgcgtta atgcaccgag
     3301 gcagcctgct tcggattggg cgggaaggcc ggattggtcg cggtgccgcg gatcagcgcc
     3361 agcgcagtct gtagcgcttt gtcgtcattc ctgtcccttg gcacaaaggc ctgcgagccg
     3421 gtctgctcgt caccttccgc tttgaggtgt ccgggcagat tcgcttcgct ccgtgtttgc
     3481 agctgcgctg ccacctcctt cggcacgtcc tgaaacacct cgatgtccgg tgcgatgcct
     3541 tgcgcttgga tggaatgtcc cgacggggtg taatagcgcg ccgtggtcag ccgcagtgcg
     3601 ccgttgcccg ggcccagcgg aatgatggtc tgcaccgacg ccttaccaaa ggttcgggag
     3661 ccgataatgg ttgcgcgctt ttggtcctgc agggcgccgg cgacgatttc cgaggccgaa
     3721 gccgagccgc cattgatcag cacgatcagc ggcttgccgt cgatgagatc acccggcacg
     3781 gcgttgaacc gctggacctg agcagcatcg cgcccccgga tcgagacgat ttcgccactg
     3841 atcagaaacg cacccgccac ccgaaccgcc tgatccaaga ggccgcccgg attgttgcgc
     3901 aggtcgagaa tgtagccctt gatctgctct ggcggagtct ttgccgttat cgcttcgatg
     3961 gcctgcttga gttcatctgc cgcgcggcca gtgaactggg tgatccgaac atatccgacg
     4021 tcatcccctt cgagctgctg acgcaccgcg ctcaccttga tgatttcgcg ggtcagcgtg
     4081 agattgagcg gcgccgatct atccttgcgc atgatctcca gccgaacctc cgtgccgggc
     4141 gtaccgcgca tcttttccac tgcctgggca agggtcatac ctttgaccgg catgccgtcc
     4201 acctgggcga taacatcgcc ggccagaatt ccagccctcg cggctggcgt gtcgtcgatc
     4261 ggagatacta ccttaaggag accatcctcc atgttgacct gcatgccgag gccgccgaac
     4321 tggccgctgg tcgtcgtctg catgtcacgg taactcttcg catccatata gctcgaatgc
     4381 ggatcaagcg acttgacgat gccgtcgacg gccgccgcaa cgagcttctc atcgtcaggt
     4441 ttgtccacat agtcggaacg cacgatgccc agcaccttgc tgagcaactc gatctgccgg
     4501 ctgatttcgg cgctgggcgc gggggtcccg gtaggtccgg cctgggtatg ccccgaattg
     4561 aggccgagca taaaaaaggc ggcgcccacc gccgccccgg tgacaacttt gcggaaccac
     4621 aacatgacgt ctttcctcgc tggcgagggg ggcgcacgag accttcgccc accgcttccg
     4681 cccaatccca gttccatcca tttcaattca attatgcaca cgcatcaatt agggcaaact
     4741 tatcacagct tcacgatatc gtgtgttgcg ccggctcggc tccgttaatc cggtccgcga
     4801 ccagccatcg caaccttaac tcagccgtgc taagagcccg gccgaaacct atgaccagcg
     4861 cgacatccat cgacatccac acccgcgccg acagcttggt cgctgccttt gcacgcgccg
     4921 gctatcagcg cgtgtcgccc gcaattctgc agcctgcgga accgtttctc gatctttctg
     4981 gcgaggacat gcgccggcac atgtatctcg tcaccgacgc gaccgggcgc gagttctgcc
     5041 tgcggccgga cctcacgatc ccggtggcgc gggattacct cgcttccacg gtggcggcgc
     5101 agccggcggg cttttgttat ttggggccgg tgtttcgcga ccgcggcacc gcctcgggcg
     5161 agttcctgca ggcgggcatt gaatccttcg gccgcgccga caaggcagcg gccgatgcgg
     5221 aagcgctggc tctcggcatc gtggccacct cccgttacgg cttggcggcg ccccggatcg
     5281 tgatggggga tgtcgcccta ttcgtggcgt tgatagcagc actcgatctc gcacccgcct
     5341 ggaagcgccg cctacttaag gatttcaatc gcaagacgac gctggcgcag gacctcgagc
     5401 ggttgacgct ggccagccgc caaaagcgca gcgaatacca cggcgtgctc gccgcgctcg
     5461 ccaatgccaa tccgaaggct gcccaggcgc tggtgaccga tctgttgtcg atcgccggca
     5521 aaaccgcagt cgggggacgc agcatcgggg aaatcgccga ccgcttcgtt gagcaggccg
     5581 agcttggcgc atcgagcgcg ctgccgtcgg aaacctgcgc cctgattgcg cgctttctcg
     5641 acatcaccgg cgcgccgccc agtgcggcag cagcgctgcg cgccctggca ggggaggcat
     5701 gcatctcgct caatggcgcc ctcgacctgt tcgaaagccg catcgggctg ctggccgagc
     5761 gcggtgtcga cgtggaccgc atcgagtttg ccaccgcgtt cggacgcgga gttgattact
     5821 acagcggctt cgtgtttgag ctacacgatc cggccggccg ggtcgacggc caattggcgg
     5881 ccggggggcg ctacgacgtc ctgctgtcaa ggcttggcag cccgcagccg gttgcggcgg
     5941 tcgggtttgc ggcgtggatc gaacggctgg aagcgctggc gacacatagc ggggaaaagc
     6001 catgagcatg ctcatcctcg cagtgccggc gaagggtcgc ttgcaggcaa acgcggaggc
     6061 gtttttcgac catgccgggc tggaactcgt caagccccgc ggagcacgtg attatcgcgg
     6121 cgccatcgcg cgcctcgacg gcatcgaggt ggcgtttctc tcggcggcag aaatcaccga
     6181 gcaactcgcc gacggcgcgg tgcatttcgg catcacgggc gaggacttgg tgcgggagat
     6241 gattcccgcg gccgacgaca aggtggtgct gctggagggg cttggattcg gccatgccaa
     6301 cgtggtggcg gcggtgccgg aggcctggat tgacgtgcgc gacatggcgg acctcgatga
     6361 cgtggcaatc tcgttccgca gcaagcatga ccgccgcctg cgcgttgcca ccaaatatat
     6421 caatctcacg cgcggctttt tctcccacca cggcattatc gactatcgca tcgtcgagag
     6481 taccggggcg accgaaggtg cgcctgcggc cggcaccgcg gagttgatcg tcgacatcac
     6541 caccactggc acgacgctcg ccgccaacgg cctcaaggtg gtcgaagacg gcgtgatact
     6601 gcgatcgcag gccaacctgg tggcagcgcg gggtgcgacc tggggcaaga tggagcttga
     6661 aatcgcacgt cttatcctcg atcgcatctc ggcacaggcg cgagcgcggc tgtttcggga
     6721 ggtgcggacg cgattttcgg gttggaacga tgtcctgcac ggcctcgcca gggaaaagtt
     6781 cggcgtgaca acgccattcg gcgggccgac gtcatccgaa ttgcttaccc tgcactgccc
     6841 gcccgatgcg gttcacgggc ttgcgagctt tctgcgccag cacggcgccg acaccgtcac
     6901 ggtggcgtcg atcgactatg tgttcacccg ggataatccg ctgtttgcca agctggtggc
     6961 ggcgttgtag ggcagcgttc gagcggtttt acgcgctcgt ttgtcacaag cagcaacaac
     7021 aacaatttga agcaatgaat ggacttgagg caaacatgcg tcctgaagtc tgctgggtcg
     7081 acgttgctgg agccgggaaa ggacgtatgg ctgtcatgcc acgcccgcgc gctggcgatt
     7141 ggcttaatga tgagattgtg gactggcaat gggaaggaaa ttacacacgt ggtcggtttg
     7201 ctcgaatctc ataaagttgc cgatgttggc cttgagcaag aagccaagct ctgacgccct
     7261 gcgaggctgc gatcggagtc acctttcggt ttgtagctgc gttaatgaag catcaaccca
     7321 attcagttgg ccggaatgcc ccttgggagt cttcggcggc agcacgtcgc gggcggaaca
     7381 ccacgaaatg cgacatcgag aagttgacca caaacgccgt cagaatggca cagcccttgg
     7441 cgggcagcac aggcatgaaa tgcgccgcaa taaccagcgc agtggtgctg gcaatggcac
     7501 cgagaattcc cgacgctaca aatgttccgt aatccagcca gcgcagccgg cggcccgatt
     7561 cggccgcaaa ggtgatgaag gaattcatca tataggagcc cgacaccgcc accacccagg
     7621 cgatgatgtt ggcggtaatg agaagcagcg tgtcgcggct ggtgcaagcg caccatagcg
     7681 ccaatagctc gagcgggcgc aacgccccct cgtgtgactt gaggtacgag tagacaagca
     7741 gaaaaaccgt cgtatcaacg ccgacattga cgacgccgat caacgcaaag ctgatcgcct
     7801 tgcgtagcat gtcgaagtgc ggctcgacca atgcggtggc gcgcgggaac ctggcccgga
     7861 ggcgatcaat cggaagcttc gttttcgaaa gcatggcttc gcttagcacg tctcgccggg
     7921 cccgccgagc ccggattttg cgcgtgaagc tgccgccccg accggcagat gccgcgacat
     7981 cggccggccc atggggtatg atggcgtatc gacaaaccgc aagacgtgaa acccatggca
     8041 cccgatcaac gcgcccccca ggggcgagat aacttcgcaa cggtagcccg ccgcgacccg
     8101 gtggggagcg ccgggctgtc gatcgtggtg cccgtctata acgaggcagc cgggctggcg
     8161 cagcttcatg cgcacatcag tgaaattgcc gcgaaactgc ataccagatg ggggcttgcc
     8221 tgcgaagtcg tatatgtgga cgacggcagc ggcgacgcat cgctcgatgt ggcgcgcgga
     8281 ctgccggcca tcgccgcaga cattcaggtg gtgtcattgt cgcgcaattt cggcaaggaa
     8341 gcggcgcttc tcgccgggct cgatcacgcc cgccgcggcg ccgtgctgtt tatggacgcc
     8401 gacggccagc acccacccgc gctgatcgaa aagctggctg cgcattggct caatgacgga
     8461 tacgacgtcg tatacaccgc caaggcgcat cgagaaaacg agccgacgct gctgcgcctt
     8521 gctgtcaggg gcttctatgc gctgatcaac tggggcgcac gccagaagat ccctgcggat
     8581 gccggcgatt tccgcctgct ttcgccgcgt gctgctctcg cgctgcgcca gatgccggag
     8641 cgcaaccgct tcttcaaggg cctcgccagt tggatcgggt tccgacagtt gcgtgttgac
     8701 tacgagcccg ccgcccgcac ccatggacgc accagctgga gcctgggttc gctgatcggc
     8761 ctatcggtcg agggcctgac ctccttctcg gtggcgccgc tgcgccttgc agccctgctc
     8821 ggcaccctgc tcgccgccgg cgcactcgtc tttagcgtct ggaccctgat tgaaaccttc
     8881 gtttacgagc gcaccgtgcc gggctacccg tcggtcatca tcggcatcat ggtaatcggt
     8941 ggcgtccagc tgctgatgat cggcgtaatg ggcgaatata tcggcaaggt gttgtccgag
     9001 atcaaacatc ggccggccta tttcgtcgcc gaacacacct tcaaacgcgc gcaggacgag
     9061 agcggtgcgg ccgacagcgc aacgcgcgat gccgcggaat agcttcgtgg aagcatcgac
     9121 cgcgcgccaa gtctcgtgtg ctgccatatc cggcaatgcg gcgtcacagc gactgcgaaa
     9181 attgtggctc tgcgcggacg actacggcat ctcgcctgcg gtcaaccgcg ccatccaaga
     9241 tttgatcgcg cgcggtcgga tcaacgccac atccgtgatg gtgacagcgc cgagcttctc
     9301 ggccactgag gcgcgggcgc tttgcggcct cggcggaccc caccgccacg ccgccatagg
     9361 gttgcatttc acgctgacgg cgccgttccg gccagcgaca cgcgcctacc gccccatcgc
     9421 ccaggatggc gcattcttga gccttgcgcg cacactcgcg gccggattgg tgcgccggct
     9481 cgatcccgat gcgctggcag ccgaagccac aggtcagttc gcggcattcc aggcagcctt
     9541 tgggcggccg ccggatttca tcgatggcca ccagcacgtc cagcttttgc cgcaggtcag
     9601 cgacgcggtg cttgccgcca tgaagcggct ggcacccgat gcctggatcc ggcaatgcgg
     9661 acgctcgatg ccagtgcggc gacgatggag cgaccccaag ggtctcctgc tcgacatcct
     9721 gagcgcccgc ctgcgcgcgc gcagcgccgc atgcgggatt cgaaccaatc cggccttcgc
     9781 cggcacctac aatttcacgc gcgccgccga gtttgaggcg ctgtttggat cgttcctgca
     9841 aagtctgccc gatggcggcc tcgtgatgtg ccatccggga tttgtcgatg cggaattgca
     9901 gcggctcgac agattcacca acatgcgcga gcaggagcac gcttttttcg cgggtgaacg
     9961 gtttccagcg ctgctcgcgg cgcatggcat ggtgctggct tgatcctgcg gcggtggggt
    10021 ggcgaggccg cagccaagcc agcgatgtgt ggtgcgacgg cctgtctcac catcaatcgc
    10081 ccacgggtgc tatacggctc cccatatgag gaccggacgc catccggcaa aggagaggaa
    10141 acgatgaccc cgcaggaaca gcagcttgtt gcggatctgt tcgagcgcct tgcctcactg
    10201 gaaggccagc gccgcgaccc cgatgccgaa cgactgattc gcgaagggct cggccgcgcg
    10261 cccaattcgg tttacgcgct ggtgcagtcg gtcctggtac aggacgaagc cctcaagcgt
    10321 gccaacgccc gtatcgaaga actcgaacaa gctgccgctc cacccaacga gagcggcggc
    10381 tttctggaca cgatgcgcaa cgcgatcacg ggacgcgagc cggcacgggc ctcggtgccg
    10441 tcggtgcgga ccggcggtca gggctcgagc ggggtgtggg gcccacggcc agaggcgagc
    10501 cagccccctc cgcaggtcgg atatccgcag gcgggttacc cacaggccgg atatccatca
    10561 ggcgctccga tgggtggcgg cagctcgttt cttggcaccg cggccgcaac tgtggcgggc
    10621 gtggttgggg gcgcgctgct gctcaacggc atccgttcca tgatgggcgg ccatcaaggc
    10681 tttgcgggcg attatgatcg cgcaagcgcc ggcgcggcgc acgcgtcatc gccgtgggac
    10741 agcgggggcg atcgcggcgg cagcggcgat ctggggcgcg atgcggggct cgacgacatc
    10801 ggcggcggcc gccgggcggc agcgcatgat gattccagcc gcagcggttt cttcagcgat
    10861 actgccgaga atgagtcggg cgatgcacca gacgatgaat tcgatgtcgg ggacgccggg
    10921 gacagcggcg atgtcgacac cgcgtgacgg agctgacatt ctccggttca tggaatgaat
    10981 agaacggctg cggcagacaa cgccgtcgtc gtgtcaagat aacagacaag ttacggctgc
    11041 ggcatgacat gaccacaggc cttgcaggtg cggtgcgcct cactgccgaa aaattgcgcg
    11101 tatgcctttg agaccggatc ggcgcgataa tcgtgcactt gcgcggtttc ctcatgcaac
    11161 aattcatcgc agttcggaca gaaccagcaa aaccgatcga tttcgcccgg tcgccgttgc
    11221 cgttcgatga ccagcagata cgcgtcgggc ggaaagcgcg gagaatgcgg cgtgccggcc
    11281 ggcgtataga tggtcgaccc ttcggggacg acagcgattt cctcattgcc gtcgggggtg
    11341 cggtaatgca atcgcatctc ccctttgatc atcagcatga cctcgtcgct gggattgata
    11401 tggaactccg agcgatattc gcgaccacgc gccacaaagg cgagcgattc gggctcctgc
    11461 cacagcacgc tgacccgctc gccccgaaga gcgagctggc ggccacgttc gagcaggtcg
    11521 acgatcggca tcggcagcat gcgaaggttc ctcgacgatg atcaatgtcc cggcagcacc
    11581 aggaatttcc ctttgctcgg cagcgtcgtc ttcgacacca ccagggacgg tgtttcggcg
    11641 aattcgacct cgtattggcg gttgacgcgt tcgaggaacc ggcgcagcgt gaaggtgctg
    11701 aaataatgca tcggcatcat caacggcgcc ttcatggctt gtatcacttc caccatgcct
    11761 tccagatcca tggtaaagcc gccgtccacc ggcacgagca atatgtcgat atggccgatg
    11821 tcattgagtt gttgttgcgt cagggtgtgg tgcagatggc ccagatgggc gatgcataga
    11881 ctgcccacct cgaagatgaa gatggaattg ccgtttcgct cggtgccgcc gttccaatcc
    11941 cggatattgg tggaaacgct gcgcacgtgg acatccgaat aggtcacgtc gtggttggcc
    12001 ggcttgccgt cagggcgcca gccgcgcaac acgaacttga tgtccggatc gggccgatcg
    12061 gtgtagtggg tagagtgggc gtggttcatg gtggcgatgt caggtaacac cggcggcctt
    12121 acgtaatcat tgtagtccgt ggcgatgcgc accagtttcg ggctctcgat cagaaaggtc
    12181 gagtggcccg cataggtgat tcgtgcctca ttgggtgcaa gcgccgtcgg tcggaatgcc
    12241 gcgggaagaa cttgcggacg ctccgatgcc acgagccccg ggcagctttc ggtcatttcg
    12301 ggcttggcgc cgggttgctg aggcgattct tcaggcgcgg caggctgggt aaatgcctca
    12361 attcggatca gacagaacaa gctcgccgtg aggatcgtca gtcgcgtcaa ataggctgat
    12421 gcggccatgg aacgctccgt gaagttgcct tcatggagct taactcaagt agcggccgat
    12481 cgccctgttt tatttaagca gtccgttctc ttgcgcgagg gcgcgcagcg atctctctgg
    12541 tcttgctccg agatgcgaaa tgatctcggc ggccgccagt gcaccgagtc gcgccgccct
    12601 gtcatcgcta aatccgctgg ccatcccgaa cagaaatccg gccgcgaaca ggtcgcccgc
    12661 gccggtagta tcgaccacgc gttctaccgg aaaagccggt gtcgcagtgg cttgcgcgcc
    12721 ttcaatgacg acgcagcctt tggcgctgcg cgtcaccacg gcgcgtcggg cgtcgccgcg
    12781 cagggccgcg atcgcggtat cgaaatccgc cgtctggtag aggctatgca attcggcctc
    12841 gttgcaaaac aaaagatcga ccgtgccgga gcgcagtaga tgcaggaact cgtcacgcca
    12901 ccgatcgacg cagaaggcat ccgacagcgt cagggccacc agtcgcttcg cctcatgggc
    12961 gacggtcgca gctttgcgga acgcctcctt ggcgtgatgg ggatcccaca ggtagccttc
    13021 gagatacgtg atcgcggcac ttgccaccac ctcatcgtcg atgtcacgcg gatgcaggtc
    13081 ctgggcagcg cccaggaagg tgtgcatggt acgctcgccg tccggcgtca ccagcacata
    13141 gcagcgcccg gtggacggcc ccgcagccga cggcgccgta tcgaacgcca cgccggcggc
    13201 gcggatatcg tgagcgaaca cggttccgag cggatcgtcc ttgacgcggc cgatgaaggc
    13261 cgcgcgggcg ccgaagcccg ccacccccac gatggtattg gccgcagagc ctccggaaat
    13321 ctccaccgca ggccccatgg catcgtagat ctgggcggca cgtgcctcat cgatcagcga
    13381 catcgacccc ttgcgcatcg catgctttaa gaggaagtcg tcgtcggcac gcgtgatcac
    13441 gtcgacaatt gcgttgccaa gtccgagaac gtcatagcgg acggagttca tgtgagcata
    13501 atatccgatt cggaggccag ggaatgtcca ttgcgcgcga tgtcacgac
//
LOCUS       DATILV010000195         5058 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2856620, whole genome shotgun sequence.
ACCESSION   DATILV010000195 DATILV010000000
VERSION     DATILV010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5058
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2856620"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(816..2234)
                     /locus_tag="VLJ17_04475"
     CDS             complement(816..2234)
                     /locus_tag="VLJ17_04475"
                     /inference="COORDINATES: protein motif:HMM:NF021982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHB depolymerase family esterase"
                     /protein_id="HSV22266.1"
                     /translation="MLLRRTVIALAYATVAVVPALAAEPLVLRGYNATIEESSISGIS
                     SGAFMAVQFATAWSSVIKGVGVVAGGPFWCAKADADDVINFYTLPMMTATGPCMKGPP
                     PDLNDLLAKANAKAASGDIDPTQNLSRQKVYLFHGYNDAVVAKSVTDAAASFYRHYLG
                     DANRGNLYYQTALGAGHSLVVRREPHVNGLNDCKDNESPYIDRCGYDQAGIILQHIYG
                     ALNPPNLDHLAGTMKRFDQSMYSKPDDTSPLSLGDTGYVFVPKDCDDGGACRVHVVLH
                     GCKQDVGDIGRRFIDDTGYNSWADTNHLIVLYPQTESSWYLPYNPDACWDWWSYVNHE
                     DSYVTKSGSQIRTIKAMLDALTAGTTPVRGSAAVPGMAPDALTVVDTSDTSAALAWAP
                     VRGATAYHIRRSEADGTFVPVGRVVGPSFGDSGLTPQTAYRWRVSAVVDGVDGPTSTE
                     TAAATRPTPAPCDTPGSCPISR"
     gene            complement(2560..3561)
                     /locus_tag="VLJ17_04480"
     CDS             complement(2560..3561)
                     /locus_tag="VLJ17_04480"
                     /inference="COORDINATES: protein motif:HMM:NF025878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HSV22267.1"
                     /translation="MSTSSGVATVGNRDCKLVRFSTADYAPRERSDAWREIYGRTLQK
                     MDIEPLPAEQPHAEATLLRMPGFAMMAGRRSAAIYRRSPQFIDHDDVSITWARSSGYQ
                     TQQLGRTLDLVRGEAIVLTAGEAGQLRVPKLDDYVNLLVPRCCLSPLIADLDDAYGRR
                     PIPADSPALQLLTRYLGILQEAGTFAVPELRRQAVAHIHDLIALAIGATPDAAEIAKS
                     RGARAARLRAIKQDIATLLDQPDLSVATIAARHRIKPRWVQRLLESEGTTFTEYVLAQ
                     RLVRAHRLLTDPLHANEKVSSIALDIGFGDLSYFNRAFRRRYGMTPSELRAAARYAN"
     gene            3939..4664
                     /locus_tag="VLJ17_04485"
     CDS             3939..4664
                     /locus_tag="VLJ17_04485"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HSV22268.1"
                     /translation="MVKTGDILYHPDPLPGGPSILPGEGIGGGKPPLPAHYVMGHDDR
                     GRERLALQASILNPFTEELLRRAGISTGMRVLDLGCGIGEVSLMAARLVGRHGAVTAI
                     DIDQAALATAADRAREQALGNLKFVEASIDQYEPERVFDAVIGRHILIHSRDPLAILS
                     KAYECLSQAGVAVFRDFFGTMTQGNIGTRLLHLLLEAGFRAPDCRRVPHGWRRGQSIL
                     RMDRGKLPQHCSARCGGRICQRV"
BASE COUNT          932 a         1529 c         1564 g         1033 t
ORIGIN      
        1 cttcgaggct ttcgtcagta cgatcccgat cgcgtccggc gggtccgctt actgaggtgc
       61 acctgccgcg ccggtcacga agcgtggcgg ctcattttga cgcacagcgg aagcggagtg
      121 gcggccgcgt catccgcgcc accaacgttt gatgacaaaa cagccttcgg cttcccaagc
      181 gatcagcccg cctgcgagcg cctgcgcggt ttcaaagctg cgcacctcag aggtgtcgct
      241 tccgaaaccc tatccgtcgg agtggcggcg gctatcgaat cagaacatga ttgcgccgat
      301 gatcgcaatt gccctccgtt ttgttcgcat gctgcgcgac tgcttcaggg cgcgacggca
      361 gcccgaagct gaagttctgg ttcgcacccg atccttggtg ggctccaccg ttcgatacgc
      421 acgaatctag ttttggaaac gacaggctgc tcttcgcggt tccccgcgtc ggcgccaaaa
      481 ccggtgcgcc tcgcgaccca gcaggtgtag tggagaactt tcgggatcgc ggcgttgatt
      541 ttattcattt tttgccgcca gttggtaaag ttgggttggc tgggtccgcg agcttttgtc
      601 ggtcggaatt ttcggaaggc tagtaactcc ctagccgacg gcttgggagt taccggaaac
      661 gaaactaatg tgctcgataa ccggaattca taaaaatttg aatgcgaact tttattttgc
      721 cgcgaaccgt cggctatttt gccgcgaacc gtcggcaacg ccccgttgcg ggaccccaac
      781 acccgggtga tatttgtcag ggacatattt gcttctcatc ggctaatcgg gcagctgcca
      841 ggagtgtcgc aaggagccgg agtgggccga gtggcggcag cagtctccgt ggaggttggc
      901 ccatcaactc cgtccaccac ggccgaaacc cgccagcggt aagccgtctg gggcgtcagg
      961 ccggagtcgc cgaaactagg ccccacaacc ctgcctacag gcacgaacgt accgtcggct
     1021 tcggagcgcc tgatgtggta ggccgtcgct ccccttacgg gggcccaagc cagcgctgcg
     1081 ctcgtatcgg aggtgtcgac caccgtgagc gcatcaggcg ccatcccggg caccgccgca
     1141 gatcccctca ccggggttgt gcccgcagtg agagcgtcca gcatggcttt gatcgtcctg
     1201 atctgcgatc cggacttcgt gacatagctg tcctcgtggt tgacgtaact ccaccagtcc
     1261 cagcacgcat ccggattgta aggcaagtac cagctggact cggtctgcgg gtagagcaca
     1321 atgagatggt tggtatcagc ccacgaattg taacccgtgt catcgatgaa ccgtcggccg
     1381 atgtcgccaa cgtcctgctt gcatccatgg agcacgacat ggacgcggca cgccccgccg
     1441 tcgtcgcagt ctttggggac gaaaacatag ccggtgtcgc ccaggcttag cgggctggtg
     1501 tcgtcgggct tgctgtacat agactggtcg aagcgcttca tcgtcccagc caggtggtct
     1561 aggttgggcg ggttcaaggc gccgtaaata tgctgcagga tgatcccggc ctggtcatag
     1621 ccacaccggt cgatatacgg gctttcattg tctttgcagt cgttcaggcc attgacgtgc
     1681 ggctcccgcc gcacgaccag cgaatgcccg gccccgagcg cggtctggta gtagagattg
     1741 ccacggttgg cgtcgcccag ataatggcga tagaagctgg cggccgcgtc cgtgaccgac
     1801 ttggccacca cggcgtcgtt gtagccgtgg aagagatata ctttctgccg gctgaggttc
     1861 tgcgtcggat caatgtcgcc ggacgccgcc tttgcgttgg ccttcgcgag aaggtcgttc
     1921 aggtccggcg gcggcccctt catgcatggg cctgtcgcgg tcatcattgg tagcgtatag
     1981 aagttgataa cgtcgtccgc gtccgctttt gcgcaccaga acggcccgcc ggcgaccacc
     2041 cccacgccct tgataaccga agaccaggcg gtggcgaact gaaccgccat aaatgcgccg
     2101 gacgatatgc cagaaatcga actttcctcg atggtagcgt tataaccgcg tagcaccagg
     2161 ggctccgcgg cgagagccgg gacgacggcg accgtcgcgt aggccagggc aataacagtt
     2221 ctgcgcaaca gcatggtctc ctttttctaa ttccaatcgc gggaccgctc gcgggatatg
     2281 accgggatca ccggcatgcg cgatttggtc gatgtattgt accgcgatgc tgtaagtcat
     2341 cccggcttca ctacgtttac actctatgac ttcgacggtt aatcctcggt gacgtccgag
     2401 cctgttcccg cggacgatac gcgttccgaa atgtggtatt actggaactc ctcgcatttc
     2461 aaggcgaacg acgcggctat tctgcttcac ggcgccacgc ggcggccatc actgccgccc
     2521 caccttcgct atgggccgcg acccgggatt cgctgtcggt caattggcgt accttgctgc
     2581 ggcgcgtagt tccgagggcg tcatgccata gcgtcggcga aacgcgcggt taaaatagga
     2641 cagatccccg aacccgatat cgagcgctat actgctgacc ttttcgttgg cgtggagggg
     2701 atccgtcagc agccgatggg cgcggacaag acgctgcgcg agcacatact ctgtgaaggt
     2761 cgtaccttcg ctctccaaca gccgttggac ccaccgcggc ttgatccgat gacgtgcggc
     2821 gattgtcgcc accgacaggt cgggttggtc gagcagggtt gcgatgtcct gcttaatcgc
     2881 gcgcaaacgc gccgcccgcg cgccccggct cttggcgatc tcggcagcat ccggcgtcgc
     2941 tccgatggcg agcgcaataa ggtcgtgaat gtgcgctacg gcctgccttc gcagttcagg
     3001 aaccgcgaag gttcctgcct cctggaggat gccgaggtag cgggtcagaa gctgcaaagc
     3061 agggctgtcg gcaggtattg gccgacgacc atacgcgtca tcgagatcgg caatgagcgg
     3121 cgacaaacag caccgcggca ccagcaagtt gacgtagtcg tcgagctttg gaacccgcaa
     3181 ctgtcctgct tcccctgcgg tcaagacaat cgcctccccg cgaaccaaat cgagggttcg
     3241 accgagctgt tgcgtctggt agccggagct gcgtgcccat gtgatactga catcatcgtg
     3301 gtcgatgaat tgcgggctgc ggcgatagat cgcggcggaa cggcggcccg ccatcatggc
     3361 gaaacccggc atccgcagca gagtcgcttc ggcatggggc tgctcggccg ggaggggctc
     3421 gatgtccatc ttctgcaggg tccggccgta gatttcgcgc cacgcgtcag aacgctcccg
     3481 cggtgcataa tccgcagtcg agaaccgaac gagcttgcaa tccctgttgc cgacagttgc
     3541 gacgccgctc gaagtgctca tggccagact ccgctcgctc tgcgctatct gcgcgcgagc
     3601 tgccagacgt ccaccttagt cggtcgacag acgcgagcgg ttcaaggttc cggcgaattt
     3661 ttttcacctg gatggctcgt ggcgggagcg aaataggttc atcgtctccc gatccttgag
     3721 atgcctttcg attttccaaa gggaatgcgg acgagggcga tggcgtgtcc ctccttatca
     3781 atgaaagtcc ctatcaactg gccgctacgg tcctagtcaa ttgtcgcgcc agtccaagaa
     3841 cggatgcgcc gagatcgcta tgggaattgc ggccagcgcg accgtgcggc cgcgagtgtg
     3901 aagaagaacg gctctacgag gcgatcaagg acaagaatat ggtcaagacg ggcgatatcc
     3961 tctaccaccc cgatccgctg cccggcgggc cttccattct cccaggggaa ggcattggcg
     4021 gaggcaaacc gccgttgcca gcgcactatg tcatgggaca cgacgaccgc ggacgggagc
     4081 gtctcgccct gcaagcttcc atcctgaacc cgttcaccga agagcttttg cggcgcgcgg
     4141 ggatttcgac cgggatgcgc gtgctggatt tggggtgcgg tatcggcgag gtttcgctga
     4201 tggcggcccg gctggtgggg cgccacggcg cggtaaccgc gatcgatatc gatcaggcgg
     4261 cattagcgac cgccgcggat cgtgcccggg agcaggcgct ggggaatctt aagttcgtgg
     4321 aggccagcat cgatcagtat gagccggagc gcgtcttcga tgccgtcatc ggccgccaca
     4381 tcctgattca ttcgcgggat ccgctcgcga ttctttcgaa ggcgtacgaa tgcctgtccc
     4441 aggcgggtgt ggcggtgttc cgggatttct ttggtacaat gacgcagggc aacatcggga
     4501 cgcggttgct tcacctcttg ctcgaggcgg gcttccgagc gcccgactgc cgtcgagtac
     4561 cccatggatg gcggcgcgga cagtccattt tacgaatgga tcgtggaaag cttccgcagc
     4621 attgctccgc gcgctgtggc ggtcggattt gtcaaagagt ctgagttcaa catcgatgca
     4681 ctcgagcagc aattacggca ggaagccgct tcgtgcaatg caagcatccc gggacctacc
     4741 atggtgggct gctttgcgcg aaagccttga ggtgcctgct ctccggcgcc tagaattccc
     4801 tcgagggatt gcgccggaca cgcacgctcg gatcgacaat agatactgtg atctttggtt
     4861 gccaaatgcc atcgctgagc ttacgcggca ccaccgtgcc ggtcacaacg attcgcgcca
     4921 atgatccttg atcgccgagt atccgacatt cgctcgcatc ggccgctcgg cctgacgtga
     4981 tcggtgcaac tccgctgcag ccgcctttgc gccttcgctc aatgccatca cgatcgcgtt
     5041 cggcgagcgg cgaagccg
//
LOCUS       DATILV010000196         2780 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1069488, whole genome shotgun sequence.
ACCESSION   DATILV010000196 DATILV010000000
VERSION     DATILV010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2780)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2780)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2780
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1069488"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2466)
                     /locus_tag="VLJ17_04490"
     CDS             complement(<1..2466)
                     /locus_tag="VLJ17_04490"
                     /inference="COORDINATES: protein motif:HMM:TIGR02074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PBP1A family penicillin-binding protein"
                     /protein_id="HSV22269.1"
                     /translation="MAAKPPGSRLKSYTPQAIVSAPPNERKHILRRFWFPAVILLALA
                     AGGLTGIIAAYQLNYSQAASEVAALATYRPSVVTRIYADDGQTVIGEFALEKRIPLKY
                     EEIPPNVKNAILAVEDARFYDHIGIDPIRIVGATWKNLTSDKVEGGSTLTQQLAKNLF
                     LTREQTLKRKMNEWLLALQIERYYTKNQIMELYANHIFLGANAYGVEAGAETYFGKQA
                     KDLTLEEAALLAGIPKAPSEYSPTANPAKAKERRDLILDLMAKTGFANQSDVDAAKAK
                     PIQLADSAYYQAPQALSPAFDYPVEYIRQDLEDKYTTRVAQTGLAVYSTINVAAQKKA
                     YEVVRSGLRRYDKGHGGWRSSYEAIPSSANNGTPTAQELASFKYPDWYRNDYVTGRYL
                     RGLVMKVDQGRNEATVRFGNYTATVTAADTGWGKRAPRTEFKPGYLAEFEIKEVDKKA
                     HHLKVELVQVPAVQGAMMTLNAKTGEIITMIGGYDFLTNKFNNAVQAYRQTGSAFKPF
                     IYTAAIEWGMTPDTTVSGAGININGWQPHNYDGSTSCADMPLKTALAHSMNIPAVHLL
                     QTVGIQTGAQMVRRFGVKVPMAPYLPSALGATEVPLDQMVSAYSAFPNKGVRVEPHMI
                     RRVLDRDGAVMEEWERTTYKVVSEYVALTMVSMMRGVVQGGTASSAQVLGVPLAGKTG
                     TVNDHTDVWFLGYTPTYVTGVWMGYPGRKKPLGNEMTGAVGALPYFIEFMKDFLKDKG
                     KEDFPKAPSMPEDMKEMYKQRQRELALERAQMTTEADETKTDENANPSAITEPRLEDN
                     TVPAPKTEAPTEPRTNTETPKKTE"
BASE COUNT          538 a          782 c          783 g          677 t
ORIGIN      
        1 ctccgttttc ttgggagtct cggtgttggt gcgcggctct gttggtgctt cggtcttcgg
       61 cgcgggtacg gtgttgtctt cgaggcgtgg ctcagtaatc gcgctcggat tagcgttttc
      121 gtccgtcttg gtttcgtcgg cctcagtcgt catctgggct cgctccagag cgagttcgcg
      181 ctggcgctgc ttatacatct ctttcatatc ttcaggcatc gacggcgcct tcggaaaatc
      241 ttccttgccc ttgtccttca gaaaatcttt catgaactcg atgaagtaag gcagggcccc
      301 gaccgccccg gtcatttcgt tgccgagcgg tttctttctt cccggataac ccatccaaac
      361 accggtcaca taagtcggtg tgtagccgag aaaccaaacg tccgtatgat cgttgacagt
      421 gccggtcttg ccagccagtg gcacacccag aacctgcgcc gaagaggcgg tgccgccttg
      481 cacgacgccg cgcatcatcg aaaccatcgt cagtgctacg tactcactga cgactttgta
      541 ggtggtcctt tcccactctt ccatcaccgc gccatcgcga tccagcacgc ggcgaatcat
      601 gtgcggctcg acccgtacgc ctttgtttgg aaaggcagaa taggccgaga ccatctgatc
      661 aagcggtact tcggtcgccc ccagagcgga tggcagatag ggagccatcg gcactttgac
      721 accaaagcgg cgcaccatct gggcgccggt ttgaattcct accgtttgca gcaagtgtac
      781 tgcgggaatg ttcattgaat gcgccaaagc cgttttcaga ggcatgtcgg cacaactggt
      841 cgacccgtca tagttatgcg gctgccagcc gttgatgtta atgccagcgc cacttacggt
      901 cgtgtccggt gtcatgcccc actcgatcgc ggcggtgtaa atgaaaggct tgaacgcgga
      961 acccgtctga cgataagcct gcaccgcgtt attgaatttg ttcgtgagaa aatcatagcc
     1021 gccgatcatc gtaatgattt cgccggtctt cgcgttcaat gtcatcatcg cgccctgcac
     1081 ggcggggacc tggaccagct cgaccttcag atgatgagct ttcttatcaa cctctttgat
     1141 ttcgaactca gccagatagc ccggcttgaa ttcagtacgc ggcgcgcgct tgccccaacc
     1201 tgtatcggcg gccgtgacgg ttgccgtgta gttgccaaag cgcacagtag cttcgtttct
     1261 gccctgatca actttcatca ccaggcccct caggtaacgg cccgtcacgt aatcgttgcg
     1321 ataccaatca ggatatttga agctggccaa ttcctgggcg gtcggtgttc cattgttggc
     1381 agagctggga attgcttcat aggaagagcg ccacccgccg tgtcctttgt catagcggcg
     1441 caggcccgag cgcacgactt cataagcttt cttctgcgcg gcgacgttga tagtcgagta
     1501 cacggccagg ccggtttgcg ccacgcgcgt agtgtacttg tcttcaagat cctgccggat
     1561 gtattccacc ggataatcga aagccggaga gagtgcctgg ggcgcctgat agtaggccga
     1621 atcggcgagc tgaatcggtt tcgctttggc agcgtcgaca tctgattgat tggcaaagcc
     1681 ggtcttggcc atcaagtcga gaattaaatc gcgccgttct ttggctttcg caggattcgc
     1741 ggtcggcgag tattcgctgg gcgctttggg aatgccggcc agcagggccg cctcttccag
     1801 cgtcaaatct ttcgcctgct tgccaaagta ggtttcggcg ccggcctcaa caccgtatgc
     1861 gttcgcgccc agaaaaatat ggttcgcgta caactccatg atctggtttt tggtgtaata
     1921 gcgttcgatt tgcagcgcga gcagccattc gttcatcttg cgcttcaacg tttgttcgcg
     1981 cgtcaggaat aaatttttgg cgagttgttg agtcagcgtc gagccgcctt cgactttatc
     2041 gctggtcagg ttcttccagg tagcgccgac gatgcgaatc ggatcgatgc cgatgtgatc
     2101 atagaagcgc gcgtcttcaa ccgcgaggat tgcgttcttc acattgggtg ggatttcttc
     2161 atacttcaac gggatacgtt tttccagcgc aaactcgcca atcaccgtct ggccgtcgtc
     2221 cgcatagata cgcgtgacca cgctgggccg gtacgttgcg agcgcggcaa cttcgctggc
     2281 cgcctgcgaa tagttgagct ggtacgcagc gatgatgccg gttagtccgc cggcggccag
     2341 ggccagcaga atcactgccg ggaaccaaaa ccgtcgcagg atgtgcttgc gctcattggg
     2401 cggggcactg acgattgcct gcggcgtata tgatttcaaa cgcgaacctg gaggttttgc
     2461 agccatgata attccaacct ttttagaata acgttgcctc agctcccttc ttgcgggcaa
     2521 cgtggattcc cacagtcgcc cactttctgc cggtttgggg caaatggatt atagcttagc
     2581 cgggtcctaa cctcgatgcg ataaggtcgc aagtggggaa gtcggcgtca aggagccgcg
     2641 aagccggcgg cagagtttga ccgcgggcgt aagtccgggg atcagcgcaa agatttccca
     2701 gccgctttag cgggcgacag aagttcgagt gctatgatga ctcatccgca atgaggacta
     2761 cccataacct ctaatctctg
//
LOCUS       DATILV010000197         2166 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4134961, whole genome shotgun sequence.
ACCESSION   DATILV010000197 DATILV010000000
VERSION     DATILV010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2166
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4134961"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..395)
                     /locus_tag="VLJ17_04495"
     CDS             complement(<1..395)
                     /locus_tag="VLJ17_04495"
                     /inference="COORDINATES: protein motif:HMM:NF016246.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 family protein"
                     /protein_id="HSV22270.1"
                     /translation="MPVAVKRVYEEPSRADGTRALIDRLWPRGLSKDRAQVHTWLREL
                     APSNELRKWFHAHREAWPEFRKRYLKELTRPDAAKALEELHDLAADVKRVTLLFASKD
                     ENHNNAVVLKELLEGMRKPPTGTGPGAIGT"
     gene            469..867
                     /locus_tag="VLJ17_04500"
     CDS             469..867
                     /locus_tag="VLJ17_04500"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSV22271.1"
                     /translation="MDGNWDLWKLQSKLEHRRLWCLGIAFLMSTFACKVERRKTDVEL
                     GLTPQQAAGRRVYDDRCDRCHEPYSTRGKKGPSLKGIFKRPYMPESGLPANDERATDI
                     IRYGRSKMPGFSEVLTQEQMDDLLAYMHTL"
     gene            1204..>2166
                     /gene="selA"
                     /locus_tag="VLJ17_04505"
     CDS             1204..>2166
                     /gene="selA"
                     /locus_tag="VLJ17_04505"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF015780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004125 - L-seryl-tRNA(Sec) selenium
                     transferase activity [Evidence IEA];
                     GO_process: GO:0016260 - selenocysteine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HSV22272.1"
                     /translation="MINATGVILHTNLGRAPLAQSAIDHIHETALNYSNLEFDLTAGE
                     RGKRDIHVDRLFHKLLNREVVGGSAERTQNGTHPAPDVATIVVNNNAAAVLLALNALA
                     DGAEVIVSRGELVEIGGSFRIPEVMAKSGAILREVGTTNRTRLADYERAINDKTRLVL
                     RVHRSNFQITGFTEQPKLEELTALAHRRSIPLIEDLGSGALIDLQSLGIWGEPSVSNS
                     LRAGVDVVAYSGDKLLGGPQCGILSGHADLIARMRSNPVFRALRVDKLIYAALEATLL
                     AYVKQDHDAIPAIRMMRVSKEEIGRRAESLAKELESSNLSAEIID"
BASE COUNT          468 a          626 c          628 g          444 t
ORIGIN      
        1 gtaccgatgg ctcccggacc ggtccccgtg gggggcttgc gcatgccttc cagcagctct
       61 tttaatacga cggcgttgtt atgattttcg tccttggagg cgaacagcag ggtaacccgc
      121 tttacatccg cagccagatc atgcagttct tccagcgcct ttgccgcatc gggccgtgtc
      181 agttccttca gataacgctt gcggaactct ggccacgctt cgcgatgcgc gtgaaaccat
      241 ttacgcaatt cattcgaggg cgccagctcg cgcagccagg tatgcacctg cgccctgtcc
      301 ttgctcaagc cacgcggcca gagacgatcg atgagagctc gcgtgccatc ggcacgcgac
      361 ggttcctcgt agacgcgctt caccgcaacc ggcatggcgt tgctctatta ttgtacgtcg
      421 gaaagaactc gtgcgggcta agcacactaa aacggctgag aggagtggat ggacggaaac
      481 tgggatctgt ggaaattgca atcaaaacta gagcaccgtc ggttatggtg tctcggcatc
      541 gcgtttttga tgtcaacctt tgcctgcaaa gtggagcgtc gcaagaccga cgtagaactc
      601 ggccttacac cgcagcaggc cgccggccgc cgagtctacg atgaccggtg cgaccgctgc
      661 catgagcctt attcgacgcg gggcaaaaag ggcccaagcc tgaaaggcat attcaagaga
      721 ccttatatgc ccgaaagcgg cttaccggcg aacgacgaac gcgcgaccga catcatccga
      781 tacggacgca gcaaaatgcc cggtttcagc gaggtgctta cccaggagca gatggatgac
      841 cttcttgcct acatgcacac gctgtgagtg tgaggtccca aacaaagcat tcatctgtga
      901 tgcggctgaa gcggggcgcc agcgtgggat aatcgggctt ttgtgaaagc catctccaaa
      961 tccgaactgt ttcgcaaact ccccgcggtc gacgagctga tgcggcaacc ggatgtgatg
     1021 ctcctcgtgc agcgagaggg tcatagcgca gtgactgatg ccgcacgctc tgtactcgcc
     1081 cgcttgcggc aagaaatctc cgcgggatgc ctggattccc cagcgctcgc gatcgcgctc
     1141 ggtggcttgt cagaagcggt cgagtggcag gtgcatcaaa acttgcgcta ctcgctgtgt
     1201 gccgtgatca atgccaccgg cgtgatattg catacaaatt tgggtcgtgc gcccctggcc
     1261 cagtcggcga ttgaccatat ccatgagact gctctcaact attcaaatct ggagttcgat
     1321 ttaaccgcgg gagaacgcgg caaacgagac atccacgtcg atcgactctt tcacaagttg
     1381 ctcaatcgcg aggtcgtggg cggctcggct gagcgaacgc aaaacggaac tcaccccgca
     1441 ccagacgtgg cgacgatcgt cgtcaacaat aatgcagcgg cggttctact ggcgctcaac
     1501 gctctggcgg acggcgctga agtcattgtc tcccgcggcg aactggtcga gatcggcggg
     1561 tcattccgta ttcctgaggt catggcgaaa tccggcgcca tcctccgaga agtcggtacc
     1621 accaaccgca ctcggctggc cgattacgag cgcgccatca atgacaaaac ccggctcgtg
     1681 ctgcgagtgc atcgttcgaa ttttcagatc accggcttca ctgaacaacc caagctggag
     1741 gaattgaccg cgctcgcgca ccggcgaagc attcccctca ttgaagacct gggtagtggt
     1801 gccttaattg atttgcagtc gctcgggatc tggggcgagc ccagcgtgtc gaacagtctg
     1861 cgggcgggag tcgacgtggt cgcctatagc ggtgataagc tcctgggagg tccacaatgc
     1921 ggcatcctca gcggtcatgc agatctcatc gcgcgcatgc ggtccaaccc ggtgtttcgt
     1981 gctctgcgag ttgacaagct gatttacgct gcactggaag ccacgctcct ggcttatgtt
     2041 aagcaagatc acgacgccat tccggcaatc cgaatgatgc gcgtttccaa agaagagatt
     2101 ggacggcgag ccgaatcgct ggcaaaggaa ctggagtcat caaacttgtc ggcagagatc
     2161 atcgat
//
LOCUS       DATILV010000198         2788 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1326908, whole genome shotgun sequence.
ACCESSION   DATILV010000198 DATILV010000000
VERSION     DATILV010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2788
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1326908"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..757
                     /locus_tag="VLJ17_04510"
     CDS             <1..757
                     /locus_tag="VLJ17_04510"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HSV22273.1"
                     /translation="AGGIRGLMAELRERLDLTCLTVTGKPLAEGLDGAKVHLRDIIHS
                     LNDPISIAGATAVLTGNLAPRGCVMKPSAADPRLLKHRGPALAFEDYNHMAREIDRDD
                     LDVTPDHVIVLKNAGPKGGPGMPEWGMLPIPRKLLKAGVRDMLRLSDARMSGTSYGAC
                     ILHVAPESYVGGPLAFVCSGDEIEVDVDARRIHLHVSEEELTRRRGAWHPPAPHYQRG
                     YGAMYAAHIGQADEGCDFDFLLAGERTPEPEIH"
     gene            1019..1723
                     /locus_tag="VLJ17_04515"
     CDS             1019..1723
                     /locus_tag="VLJ17_04515"
                     /inference="COORDINATES: protein motif:HMM:NF012401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HSV22274.1"
                     /translation="MKMSRRETMQFSATALAGLSLAGLRPDRLAAQAAQPQPDGLVET
                     QLRSISTLPLKPDGSAVEYTPQEAGAIAGVLWRTKNQTPDGEYDVRKMKIKVDARGTA
                     KLSGTLTFDVLEKLPRHSYVVRLQCGAPMPRGTVKWTGVRFSDFTQAVGAQNFAHYGR
                     LVGSDGYFIDEDMTTLMHPQVILAWQLNDEPIPPQHGAPLRLIIPFRYGARSLKAIQE
                     IQFTATTFTPPKPWPT"
     gene            complement(1816..>2788)
                     /locus_tag="VLJ17_04520"
     CDS             complement(1816..>2788)
                     /locus_tag="VLJ17_04520"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HSV22275.1"
                     /translation="ASVWQTASYDHTANLLYFGTGDAFPTFDPEYRPGDNLYTASTLA
                     VDADTGKIAWFFQETPNEHWDFDTPSPKMLYETIINGESRKVVANFSRNGFFYTLDRA
                     SGQFIRADQYQDKVTWTKGIDPKTGKPLDYDPNSDVQRYAGLGQRRGKPGQEACPWYN
                     GSPTFFPPTFDAKRMIAYVSGAEGCSGGTIVQTPMDEKKDWVGLRMCCQEQGRATAHG
                     ALWALDVRTGKIVGKTTYPIPNQSGMLSTDGDLVFMGHSTGRFSAYDADTIKEVWSFS
                     LGTPITAPPMTFSVGGKQYVAVVAGGDAELRGAALYQPSAFVAAFGL"
BASE COUNT          515 a          852 c          893 g          528 t
ORIGIN      
        1 tgcgggcggc atccgcggcc tgatggcgga actgcgtgag cgcctcgacc tcacctgcct
       61 caccgtgacc ggcaagccgc tcgccgaggg cctcgacggc gccaaggtgc atctgcgcga
      121 catcatccat tcactcaacg atccgatctc aatcgccggc gcgacagcgg tgctgaccgg
      181 caacttggcg ccgcgcggtt gcgtcatgaa gccgtcagcg gccgatccgc ggctgctcaa
      241 gcatcgcggg ccggcgctcg ccttcgagga ctacaaccac atggcccgcg agatcgatcg
      301 cgatgatctc gacgtcacac cggaccatgt catcgtactc aagaatgccg gtcccaaagg
      361 cggccccggc atgccggaat ggggcatgct gccaatcccc cggaagctct tgaaggcggg
      421 cgtgcgcgac atgttgcgtc tgtctgatgc aagaatgagc ggcaccagtt acggcgcctg
      481 cattctgcac gtggcgccgg aaagctatgt gggcgggcct ctcgccttcg tgtgctccgg
      541 ggacgagatc gaggtcgacg tcgacgcgcg acgcattcat ctgcacgtct ccgaggagga
      601 actcacccgc cgccgcggcg cctggcatcc gccggcgcca cattatcagc gtggctacgg
      661 ggcgatgtac gcggcccata tcggacaggc cgacgagggg tgcgatttcg attttctgct
      721 cgcgggcgag agaacgccgg agccggagat tcattgagaa agtgcagtat ctatgcgcct
      781 gcaatatccg ctatattggg acaggcttca tcccgatgga actactcagc cgtgtcatcg
      841 cctgcggaat gcgggcggca gagtgaccct ggcgatgctg cggagtactt ccgctttcgc
      901 gggaatgacg cccaagaatt ggcaaccgca atgccggtcc cacttcaccg aaagcacgtt
      961 ctgatgatca ccgccgcgtt ttcttcaaaa aatggcggcc aacaacggga ggcgcgcgat
     1021 gaaaatgtct cgacgcgaga ccatgcaatt ctctgctacg gcgctggctg ggttgtcgct
     1081 tgcggggctt cggcccgacc gacttgcggc ccaagcggcg cagccgcagc ccgacggctt
     1141 ggtggagacc cagcttcgta gcatctcgac gctgccgctc aagccggacg ggtccgccgt
     1201 cgagtacacg cctcaggagg cgggcgcgat cgccggcgtg ctgtggcgca caaaaaatca
     1261 aacgccggat ggcgagtacg atgtgcgcaa gatgaaaatc aaggtcgacg cacgcggcac
     1321 cgcgaaattg tccgggacct tgacgttcga cgttctcgaa aagctgccgc gccattctta
     1381 cgtggtgcgg ctgcaatgcg gtgcgccgat gccgcgcggt accgtcaagt ggacgggggt
     1441 ccgtttctcc gattttaccc aagcggtggg cgctcagaac ttcgcccatt atggccggtt
     1501 ggtgggttcg gatggatatt tcattgatga ggatatgacc acgctgatgc atccgcaggt
     1561 cattctggca tggcagctca atgatgagcc cattccgcca cagcacggcg cgccgctgcg
     1621 tcttatcatc ccgttccgct acggcgcccg cagcctcaag gcgattcagg agatccagtt
     1681 caccgcaacg acgttcacgc cgccgaagcc gtggccgacg tgacaagagt gaggcgtagg
     1741 ctgggcaaag gcacaatagg tccatcgtag gggtgcgccg tggccaacgc ctttgggcac
     1801 cctgtcggct gatcactaca gcccgaatgc cgctacgaat gccgagggtt ggtaaagtgc
     1861 tgcgccgcgc agctccgcgt caccgccggc cacgaccgcg acgtattgct tgccgccgac
     1921 gctgaaggtc atcggtgggg ccgtaatcgg cgttccgagg ctgaaactcc acacctcctt
     1981 gatggtatcg gcatcatagg ccgagaagcg tccggtggaa tgccccatga agacgaggtc
     2041 gccgtcggtt gacagcatgc ccgattggtt ggggatcgga taggtcgtct tgccgacgat
     2101 cttgccggtg cgcacgtcca gtgcccacag cgcgccatgg gcggtggcgc ggccctgttc
     2161 ctgacagcac atgcgcaggc cgacccagtc cttcttctcg tccatcgggg tctgcacgat
     2221 cgtgccgccc gagcagcctt cggcaccgga cacataggcg atcatgcgct tggcgtcgaa
     2281 agtcggcgga aagaatgtgg gcgagccatt gtaccacggg caggcttcct gtccgggctt
     2341 gccgcgccgc tggcctagtc cggcatagcg ctgcacatcg ctgttgggat cgtagtcaag
     2401 aggcttgccg gtcttgggat cgataccctt ggtccaggtg accttatcct ggtactggtc
     2461 ggcgcggatg aactggccgc tggcgcgatc aagtgtgtaa aagaaaccat tgcgagagaa
     2521 gttcgccacc accttgcggc tctcgccgtt gatgatcgtc tcgtagagca ttttagggct
     2581 tggcgtgtcg aaatcccaat gctcgttggg cgtctcttgg aagaaccacg caatcttgcc
     2641 cgtatcggcg tcgaccgcga gcgtgctcgc ggtgtaaaga ttgtcgcccg ggcgatattc
     2701 cggatcgaag gtcgggaatg cgtcgcctgt gccgaaatag agtaagttgg cggtatgatc
     2761 gtaggaggcg gtctgccaca cgctggcg
//
LOCUS       DATILV010000199         2036 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_48077, whole genome shotgun sequence.
ACCESSION   DATILV010000199 DATILV010000000
VERSION     DATILV010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2036
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48077"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            191..1180
                     /gene="moaA"
                     /locus_tag="VLJ17_04525"
     CDS             191..1180
                     /gene="moaA"
                     /locus_tag="VLJ17_04525"
                     /EC_number="4.1.99.22"
                     /inference="COORDINATES: protein motif:HMM:TIGR02666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HSV22276.1"
                     /translation="MRSQAPLLIDTFGRRIEYLRLSVTDRCDLRCSYCIPKGFRGFQE
                     PTSWLRFEEIERLISIMASRGLKRIRLTGGEPLVRRDLPNLAARLAAIPGIDDLSLST
                     NATRLHAFAALLKEAGVRRVNVSLDSLRADRVAAICGRDVLDQILAGLAAAKEAGFAP
                     IKINMVAMRGVNDDEIDDMVDFCIEQGFVLRLIEAMPMGATGRNTQYLDLQPIRRRLQ
                     QERGLVAGDVPGGGPARYMKAPDGRFSIGFITALSEHFCATCNRVRLAADGTMYLCLG
                     QREQMAFGPLLRRGASDEEIVEALRSAMMLKPERHEFNEKPEKILRIMAATGG"
     gene            1312..1521
                     /locus_tag="VLJ17_04530"
     CDS             1312..1521
                     /locus_tag="VLJ17_04530"
                     /inference="COORDINATES: protein motif:HMM:NF024634.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HSV22277.1"
                     /translation="MYIDPIACVDCAACVPACPVQAISESADLSKDELMWVQINAEKS
                     RSTPVIRTKQTPLAGAEERRAALGF"
     gene            1589..>2036
                     /locus_tag="VLJ17_04535"
     CDS             1589..>2036
                     /locus_tag="VLJ17_04535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSV22278.1"
                     /translation="MRVAIVGSGPSGFYAAEALLQSEHTTEVDILERLPVPYGLVRYG
                     VAPDHPRLKDVADTYAEIARHPRFSFIGNASFGKDFTLKELADCYHAVIFATGAATDR
                     KLGIPGEDIQGCHAASCFVGWYNGHPDYRDLEFDLSGESAIIIGQGN"
BASE COUNT          423 a          573 c          603 g          437 t
ORIGIN      
        1 aatccatcga ctcactcgaa ttgagtaccg gtagccgcga atctcttggt gccgggtcgc
       61 tttgcgatcc ggccggactc aggcctttca tttgtaccgg tacttcacgg accaagctct
      121 cgggtcggat catcaacgat cgctgggtca cgcgcttttc ataccgagaa agggccgcgg
      181 caacatcatc atgagatcgc aagccccact gctgatagac acgttcgggc gccgaattga
      241 gtacttgcgg ctttcggtca ccgaccgatg cgacttgcgc tgcagttatt gcattccaaa
      301 ggggtttcgt gggtttcagg aaccaacctc ctggttgcgg ttcgaggaaa tcgagcgcct
      361 gatctcgatt atggcttctc gtggactgaa gcgtatccga cttacaggtg gcgagccgct
      421 cgtgcggcgt gacttgccaa atcttgcggc gagacttgca gccataccgg gcatcgacga
      481 cctatctttg agcaccaacg cgacccgatt gcatgcattc gcggcgctgt tgaaggaggc
      541 cggtgtacgg cgcgtcaacg ttagtctgga ttctcttcgg gccgatcgcg tcgccgcgat
      601 ctgcgggcgt gatgttctcg accaaatcct ggccggcctg gcggccgcca aggaggccgg
      661 cttcgcgccg ataaaaatca atatggtcgc gatgcgcggc gtgaatgacg atgaaatcga
      721 cgacatggtc gatttctgca tcgagcaagg atttgttctt cgcctgatcg aagcgatgcc
      781 aatgggcgcg acaggtcgca atacccagta tctcgacctc caaccgatcc gccgccgcct
      841 gcagcaagaa cgcggcctcg tcgcaggcga cgtgcctggc ggaggaccgg cccgatacat
      901 gaaagcgcca gatgggcgat ttagcatcgg ctttatcacc gcgctgtctg aacatttctg
      961 cgccacttgc aatcgagtac ggctggcagc cgacgggacg atgtatcttt gcctcggtca
     1021 gcgcgaacag atggccttcg gtccactgtt gcgccgcggc gccagcgacg aggagatcgt
     1081 ggaggccctt cgttcagcaa tgatgctaaa accggagcgc cacgagttca acgaaaagcc
     1141 tgagaaaatc ttgcggatca tggcagcaac tggcggttga tccaccgcca agcgacattc
     1201 gaatgaggaa cgaccatgcc ccacgtggtt actgggaact gtaacggttg tagattcacg
     1261 gattgcgttc cgacctgtcc agtggcgtgt ttccatggcg acgatcagcg catgtacatt
     1321 gatccgatag catgcgtcga ttgtgcggca tgtgttccag cttgccctgt tcaagctatc
     1381 agcgaaagcg cggatctttc gaaggacgag ctgatgtggg ttcaaataaa cgctgagaaa
     1441 tcgcgcagca cgcccgtgat ccggaccaag caaacgccat tggcaggcgc cgaggagcgg
     1501 cgagccgccc tgggcttctg agccacagaa gcgtatttaa acaggctggt ggcccgctgt
     1561 gaacggaatt ggaacagtcg ataacccctt gcgtgttgcg atcgtgggaa gcggtccaag
     1621 cggtttttac gctgccgagg ctctcctgca atcggaacac acgaccgagg tcgacattct
     1681 cgaacgcctc ccggtccctt atgggttggt ccgctatggt gtcgcgcccg atcacccgcg
     1741 attgaaggat gtcgcggaca cctacgcaga gatcgctcgc cacccgcgtt tttcgttcat
     1801 tggcaatgcg tcattcggca aggatttcac actcaaagag ttggcagatt gctatcacgc
     1861 ggtgattttc gccacaggag cggcaacgga ccggaagctt ggaatccccg gtgaagatat
     1921 tcaggggtgt cacgcagcga gttgttttgt cgggtggtac aatggacatc ctgactatcg
     1981 cgatctcgag ttcgatttgt cgggcgaatc cgccatcatc atcggccagg gcaacg
//
LOCUS       DATILV010000200         1523 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4136728, whole genome shotgun sequence.
ACCESSION   DATILV010000200 DATILV010000000
VERSION     DATILV010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1523
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4136728"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            291..1460
                     /locus_tag="VLJ17_04540"
     CDS             291..1460
                     /locus_tag="VLJ17_04540"
                     /inference="COORDINATES: protein motif:HMM:NF012870.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS481 family transposase"
                     /protein_id="HSV22279.1"
                     /translation="MPWKETCAMEEREAFVHAWLSREFTMSELCERFGVSRPTGYKWL
                     LRFQAEGSQGLHDRSCAPHLQVQATPAAQVAAIVALKRRHLSWGPLTLRDWLRREQPQ
                     QQWPAVSTVGEVLKRHGLVQPRRRRHHTPPHTQPFASVCTANDVWSADFKGQFTLGDA
                     RVCYPLTITDNHSRFLLCCQGLYHPGMKLTRACFERTFRDHGLPRAVRTDNGPPFASV
                     ALGGLSGLSIWLLKLGVLPERIAPGQPQQNGRHERMHRTLKAATAQPPKANLSAQQRA
                     FNRFRLEYNEERPHRSLGGGRRPSDLFRPSPRPYPSKLPAVLYPDDFTLRKVKPGGYM
                     KWHGHIIYVTKALDGEYVGLKPLDHDRYELYFAQLPLGVFDARTSKIIKPRQSWV"
BASE COUNT          302 a          467 c          461 g          293 t
ORIGIN      
        1 actcttcggg tttcttggtt tggagcgcta cgagatcggc gagcccctcg agagtcttct
       61 tctcgacgtc caacgatccc cagacgtagt cggtcaggac gactttcgcc tttgcatcca
      121 tgtggactcc tcgctcgacg aatgagtcgt cggaatgcac ctcaattcgt cattcccgcg
      181 gaagcgggaa tccattgtca caaggtatga accgggcaca tggtttacac aggaaaccgg
      241 gcacatggtt tacaggttga gtacggtacg gggcaaggag gactgccccc atgccttgga
      301 aagagacctg tgccatggaa gagagagaag cgtttgtaca tgcgtggtta agccgtgagt
      361 tcacgatgag cgagctgtgt gagcgctttg gggtgagtcg tccgaccggt tacaaatggc
      421 tgctgcgctt tcaagccgaa ggtagccaag ggttgcacga tcgctcgtgc gcgccgcacc
      481 tgcaggtgca ggcgaccccg gcggcgcagg tggcggcgat tgtggcgctc aagcgtcggc
      541 atctgagctg gggaccattg acgctgcgcg actggctgcg ccgggaacag ccgcagcagc
      601 agtggccggc agtgagtacg gtcggcgaag tgctgaagcg tcatggcttg gtccaaccgc
      661 gccggcgccg ccatcacacg ccaccgcata cgcaaccgtt tgccagcgtg tgcacggcca
      721 acgacgtgtg gagcgcagac ttcaagggcc agttcacgct cggtgatgcc cgcgtgtgtt
      781 atccgttgac cattaccgac aaccatagcc gctttctgct gtgttgccag gggctgtatc
      841 acccagggat gaagctcact cgagcctgct ttgagcgcac ctttcgcgac cacggcttgc
      901 cccgcgccgt acgcaccgac aatggaccgc cctttgccag tgttgccttg ggcgggttga
      961 gtgggctctc gatctggctg ttgaagctcg gcgtgctgcc cgagcgcatt gcccctggac
     1021 agccgcagca gaacggtcgc catgaacgca tgcatcgcac cctcaaagcg gccaccgcgc
     1081 aaccaccgaa ggccaacttg agcgcccagc aacgcgcctt caatcgcttc cgcctcgaat
     1141 acaacgaaga gcggccgcat cgcagtctgg gcggcggccg ccgccccagc gacctgttcc
     1201 ggccctcgcc acgtccctat ccgtccaagt tgcccgccgt gctgtacccg gatgatttca
     1261 ccctgcgcaa agtcaagccg ggcggctaca tgaagtggca tggccacatc atctacgtca
     1321 ccaaagccct ggacggcgag tacgtcggct tgaagccact ggaccatgat cgctatgagt
     1381 tgtactttgc gcagttaccg ctgggggtgt tcgatgccag aaccagcaaa atcatcaagc
     1441 cgcggcaatc ttgggtgtaa acaatgtgcc cggtttcgaa tgtaaacgat ctgcccgaac
     1501 cgacaacggg tgcacgacaa acg
//
LOCUS       DATILV010000201         2446 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_560005, whole genome shotgun sequence.
ACCESSION   DATILV010000201 DATILV010000000
VERSION     DATILV010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2446)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2446)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2446
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_560005"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(107..526)
                     /locus_tag="VLJ17_04545"
     CDS             complement(107..526)
                     /locus_tag="VLJ17_04545"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV22280.1"
                     /translation="MIQGSATFPGVLANRHALVVEDDKDALDLLATILKIAGANVAAA
                     DSFDSALEALKRFTPDVLVLDIGMPKYNGYALIAKIRSQALTQHIPAVAVTGFATPTD
                     RDTALSAGFQAYISKPFEPENLLRVITQLLLKHHKTA"
     gene            complement(530..2104)
                     /locus_tag="VLJ17_04550"
     CDS             complement(530..2104)
                     /locus_tag="VLJ17_04550"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV22281.1"
                     /translation="MNILLVDDDEVDRLAIRRALRASGMDASVEDAQSAAEALDMLAS
                     NSFDCVLLDYNLPSSDGLQVMRQMREKEIRTAVVALTGHGDEQTAVELMKAGAADYLS
                     KKSLSPDRLVQSLRYATDRQRLERERDELLVREQEARHEAERANLAKDQFLAVVSHEL
                     RTPLNAILGWTRILLANPRSEMTPRGLEVIDRNARVQVQLIEDLLDVSRIISSKLRLE
                     LRSIEPVKVCESAVESVRPMADEKDIRIEEDLDLNAGPIVGDADRLQQVIWNLLTNAI
                     KFTNKGGTLQIKLRRRESEIEVMVSDTGCGIAPEFLPHIFERFTQADHGSRRGSGLGL
                     GLTIVRSVIELHGGVTFAESDGEGRGARFYVRLPMSATALPDSQWRAPAPTITPPTHK
                     LDGVLEGLKILFIDDSADARELVTAILRPYGASVKTCGSTDEALATLVKDRPDVVISD
                     IAMPGRDGYQFIRALRVREDPADRIPAIALTAYTGTEDRIGMLAAGFQLHVPKPIDPI
                     ELVTVVATLSGRSIEG"
     gene            complement(2119..>2446)
                     /locus_tag="VLJ17_04555"
     CDS             complement(2119..>2446)
                     /locus_tag="VLJ17_04555"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV22282.1"
                     /translation="TNPLYVAFNGIQGLDMLRKGEVPKNRRLVLLDLNMPRMNGIEFL
                     RELRKDSELRSIPVVVLTTSDAEKDKIEAFDLNVAGYLVKPITFPGFAELMATLNKYW
                     TLVDMP"
BASE COUNT          548 a          674 c          646 g          578 t
ORIGIN      
        1 ttcattcatc tatccctgga gtgcgcccac cttcttcagc ttacactcca cagtctcaaa
       61 aggctctttc tgggatgggg ggacgctcgt aaggcgcgtc gaaattctag gcagtcttgt
      121 gatgcttcaa tagaagctgc gtgattactc gcaggagatt ttccggctca aatggcttac
      181 tgatgtatgc ttggaagcct gcgctgagcg ccgtatcccg atccgtaggc gtagcaaatc
      241 cggttacagc aacggcgggt atgtgctggg tgagcgcttg cgatcgaatc ttcgcgatga
      301 gcgcatatcc gttgtatttg ggcataccga tatctaagac gagcacgtcc ggtgtgaacc
      361 gtttgagtgc ttcgagcgca gaatcaaatg aatctgcggc agccacgttc gctccggcga
      421 ttttgaggat agttgcgaga agatcaagag catccttatc gtcttcgacg acaagggcgt
      481 gtctgtttgc cagaactcct ggaaacgttg ccgagccttg aatcacaaat taaccctcga
      541 tcgagcggcc ggaaagcgtc gctacaacag tgacaagttc tatcggatcg atcggcttag
      601 gcacgtgaag ttggaacccc gccgccagca ttccgatgcg gtcctctgtt cccgtatacg
      661 cagtaagtgc aatcgctgga attcggtcgg ctgggtcttc tctaacccga agtgcacgga
      721 tgaattgata accatctcta cctggcatag cgatgtcgga gatcacaaca tctggtctgt
      781 ccttaaccag tgtagcgagt gcttcgtcgg ttgaaccaca ggtcttaacg gaagcaccat
      841 acgggcgcag gatcgcagtt acaagttcgc gcgcatcggc gctgtcatca atgaacagaa
      901 tctttagtcc ttcgagcaca ccgtccagtt tgtgggtcgg cggcgttatc gtcggtgctg
      961 gcgcccgcca ctgcgaatcc ggcaaagcgg tggccgacat cggaagacgc acatagaacc
     1021 gggcgccgcg gccctcacca tcactctcgg caaacgtcac gccgccatga agttcaatga
     1081 cgctgcgcac aatcgtcaag cctagcccca aaccgctacc gcgtctgctt ccatgatccg
     1141 cctgagtaaa gcgttcgaaa atatgcggaa ggaactcggg agcgatgccg cagccagtat
     1201 cggacaccat gacttcgatt tccgattccc ttcgccgcaa tttgatttgt agtgtcccac
     1261 ctttgttggt gaatttgatc gcgttggtca gcaaattcca gatgacctgt tgtaaacggt
     1321 cggcatctcc aacgattggg ccagcattca ggtctagatc ttcctcaatc cgaatgtctt
     1381 tttcgtctgc cattggacgc accgattcca ccgcgctctc gcagactttg acgggctcga
     1441 tggatcggag ttccagacgc aacttgctgc tgataatccg cgacacgtcg agcaggtcct
     1501 caataagttg gacttgaacc cgcgcgttgc gatcaataac ctccaatcca cggggagtca
     1561 tctcgctccg gggatttgca agtaatatcc gcgtccaacc cagaatcgcg ttcaacggcg
     1621 tgcgcagttc gtgggacacg acggctaaga actgatcttt cgctaaattc gctctctcgg
     1681 cttcatgccg cgcctcctgc tctcgaacaa gcaattcgtc acgctcccgc tccagacgct
     1741 ggcgatcggt ggcgtaacgt agactttgga ccagtcggtc aggagacagc gatttcttcg
     1801 aaaggtaatc ggcagctccg gccttcatca gctcgaccgc cgtttgctcg tcaccatggc
     1861 cggtcaaggc gacgacggcc gtgcggatct ctttttcccg catttgtcgc atgacttgca
     1921 aaccgtcgct ggatggcaag ttataatcga gcagcacgca gtcgaaggaa ttcgatgcga
     1981 gcatatccag agcctccgca gcggattggg cgtcctcaac agacgcgtcc ataccggatg
     2041 cacgaagggc gcgccggatg gctaggcgat cgacttcatc atcatcgacc aacagaatat
     2101 tcatttgggt ctccagcctc acggcatgtc tacaagcgtc cagtatttgt ttagggtcgc
     2161 cataagttcg gcgaaacctg gaaaggtgat tggtttcaca agataaccag ccacgttgag
     2221 atcgaaagct tcaatcttgt ctttttcagc atctgaagtg gtcagaacaa caacgggaat
     2281 ggagcgtaat tctgagtctt ttcgcaattc acgaaggaat tcgatcccat tcatgcgcgg
     2341 catgttcaga tcaagcagca cgaggcgcct attcttgggg acttctcctt tgcgaagcat
     2401 gtcgaggccc tgaataccgt tgaatgcgac atacaatgga ttggtg
//
LOCUS       DATILV010000202         9928 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1839547, whole genome shotgun sequence.
ACCESSION   DATILV010000202 DATILV010000000
VERSION     DATILV010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9928)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9928)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9928
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1839547"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..433
                     /locus_tag="VLJ17_04560"
     CDS             <1..433
                     /locus_tag="VLJ17_04560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012386273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HSV22283.1"
                     /translation="VDNDTPLLWVIRDNLGLTGTKFGCGIGMCGACTVHVGGRPTRSC
                     ITPVSSVTDADVTTIEGLDPEGQHPLQKAWVDLQVPQCGYCQSGQIMQAAALLKDFAH
                     PSDQDIDAVMTGNLCRCMTYVRIRKAIKKAAAELRKDAANG"
     gene            426..2705
                     /locus_tag="VLJ17_04565"
     CDS             426..2705
                     /locus_tag="VLJ17_04565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012386272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSV22284.1"
                     /translation="MARLQDRTDALVLSRRSFLIGVAGTGVAFGFAAGEGLAATSSAP
                     VTSRFDPTIWYSVDRDGVVTVNIIRAEMGQHIGTALARVLADELETDWNKIRIDAVDT
                     DPKWGLMVTGGSWSVWQTFPVFSQAGAAGRIALVEAGAKLLGVPVDRCQARNSAVVTG
                     DRSIAYAEIVSRGLTRTFTADELAQMPIKAASERRLIGRNVAAMDIPAKTNGTTRYGI
                     DATVEGMVYARPKIPPTRNGAKVRSIDDSAARKVKGYISSLALEDPSNTVPGWVMVFA
                     SSYPAAIRAADLVKVDWIAGDGAKISEQDVLDHGKAQIADPNGGVLLVDDSGLEPAFR
                     GASSTLERTYTTSSVLHYQLEPVNALAFEKDGIFEIHTGNQWQSLILPVLAKALGLPQ
                     EQIVMRTYALGGGFGRRLNGDYAVPAALAAKALGKPVKMVLTRPDDTRFDSFRSPSIQ
                     TLRMAFDGSGKVAAMDHHASAGWPTIVMAPGFMAKGLYGKTYDPFAIAGADHWYSVGA
                     QRVRALSNDVANTAFRPGWLRSVGPGWTNWAVESFMDEAAHMAGVDPVVFRIRMLDGK
                     GRNAGSAPSSVHGAKRQAAVLQRAAQKVGWGTAVPKDAGLGIATTFGQERDMPTWTAC
                     VARVRVNRSNGVVTVEKLTLVLDAGTIVDPDGALAQVEGASLWGISMALHEGTEFIKG
                     QVKDVNLDTYTPMRIGDVPELDIEFMDSSEAPVGLGEPATTVVAPAIGNAIFAAVGVR
                     LRHLPIRPNAVLKALTQKS"
     gene            2823..3323
                     /locus_tag="VLJ17_04570"
     CDS             2823..3323
                     /locus_tag="VLJ17_04570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22285.1"
                     /translation="MRLAGSDVPGADMQIDPALLSTISGLLGALIGGSASLTAAVYTQ
                     RYQDRLQRVAREATKRETVYADFIMSASKLLLNAYLLDGFQLDSDGQHLLGLANRMRL
                     FAPPNIIDEAEAVIRQLIEISLKPSVDLRKLAMVELSKKRDSDLLLQFSLACRADLDK
                     VYRTFH"
     gene            3610..5358
                     /locus_tag="VLJ17_04575"
     CDS             3610..5358
                     /locus_tag="VLJ17_04575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HSV22286.1"
                     /translation="MLDALTYAKAKRAAVTPSADVNSYTVGSYLAERLSQIGLKHHFA
                     VAGDYNLALLDQLLSNKALEQVYCSNELNCGFSAEGYARAHGAAAAVVTFSVGALSAF
                     NAIAGAYAENLPVILISGAPNSNDRASEHLLHHTLGTHDFSYQLEMAKKITCAAVSIT
                     SATDAPALIDHAIRSALREKKPAYIEIACNISGASCAAPGPISGVLAEEPSDSETLHA
                     AVEAAAAFLREKEKPVLLIGSRLRAAGAEKEAIQLADALGCSVAVMAAAKSFFPEDHP
                     QFVGIYWGEISAPGAREIVDWSDSLVCIGTIFNDYSTVGWTAMPTGAGVLTADTNRVH
                     FGKFDFSRIHLRDFLAALARKVEKRGATMVEYKRIRAERPPEKPAKPDAKLMRAEIVR
                     QIRPLVTSDTTVLAETGDSWFNGMQLKMPGNARFEIEMQYGHIGWSVPATFGYALGAP
                     DRRVIAMIGDGSFQLTAQEVAQMIRLKLPVIIFLINNHGYTIEVEIHDGPYNNIKNWD
                     YAGLIDAFNAEDGHGRGLRATTGGELAEAIKVALANKQGPTLIECVIDRDDCTADLIS
                     WGRRVSAANARPPRPQ"
     gene            5480..6733
                     /locus_tag="VLJ17_04580"
     CDS             5480..6733
                     /locus_tag="VLJ17_04580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012591965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV22287.1"
                     /translation="MVKPAAAAIRRPYIWAWLLVCLFYFMQYALRSAPGVMMPELTSA
                     FGLTALGVSSLLGLYFYTYSVFGLVAGASLDRYGAKLPITIGVFCVAVGSVLFGLGSI
                     GSAESGRLLQGAGSAFAFNGAVFLASHGFSDRWLATAVGFTQLFGMLGGFAGQFVVDP
                     LVHGPMTWQSFWIYGGMLVAVVAVCVLVVTPGRTEKAQGSIWAMFAPYKVVLKNPQSY
                     LCGLVGGLMFMPTNIGDMIWGVPFLQSLGVEHAEAIARSSMVPLGWVIGAPLCGYVAD
                     RLGRRKPVVLTGIVVMLLTFIGIVYMPGLLPPYIGGLVFGIGSGAAMITYTMIKEVNP
                     DNVKGSATGAMNFLVFSLSALLAPAFGLLLVRFAGGQPPNLGTFQSTDLVWVGAIVLA
                     FILTLFLRETGSAEQSVPPARPSRT"
     gene            6827..8041
                     /locus_tag="VLJ17_04585"
     CDS             6827..8041
                     /locus_tag="VLJ17_04585"
                     /inference="COORDINATES: protein motif:HMM:NF016513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HSV22288.1"
                     /translation="MKRFANLASPLSKPRLRFCLRVTISAVLAFALARFFTIPLHGLW
                     AVLTAVVVTQMSVGGSLKATADYVIGTIGGAVYASAVAALVPHPTAVTAAGVLALAIA
                     PLAYAAALNASFRVAPFTAVLVLMISSQLGEGPIESAFYRLLEVAIGGAVAMAVSVFV
                     FPARAHSLGLAAAARVLENLAQVLPVLLTRFRTKIDTFENQHIQDEIGRTVNAFEDIA
                     VEAQRERLINLVAEPDPAMLARALLRLRHDLVIIGRVGAVPLPDRIAERLGPPLARIG
                     AAASDFLLASAAALVARRPPPPLSAVETAFADCVSEIAALREAGLMRALPGSELERIF
                     TLGFALQQLQQDLLDLARSVREWAQDPDLTRASLRPDAQTLFGIFVIPPLYVIASALS
                     KYADCCIAKAVT"
     gene            complement(7978..8430)
                     /locus_tag="VLJ17_04590"
     CDS             complement(7978..8430)
                     /locus_tag="VLJ17_04590"
                     /inference="COORDINATES: protein motif:HMM:NF016513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HSV22289.1"
                     /translation="MFALAQYGELFVIAAAIWICFCNFAAGRCAILRRMAFNWPVTRW
                     RSSASRQPFNRMEPIVWWEARFTEIVLGIICAAVVSRLFFVRELSPNLVELVHSLTRR
                     ADRFVTALLDADADRARVADERNVLINDYVTALAMQQSAYFESAEAMT"
     gene            9134..>9928
                     /locus_tag="VLJ17_04595"
     CDS             9134..>9928
                     /locus_tag="VLJ17_04595"
                     /inference="COORDINATES: protein motif:HMM:NF020037.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HSV22290.1"
                     /translation="MGNGARSKHKTRRRKMTVDLDEGKKAEEQPGFVAQLRATLNVIP
                     AYTWYAAPAGGLTFVNKRTADYLGLPKDHPLRFGIDIGAQWDAHIPLLHPDDREESRK
                     AWSTCLRTGEAAEFSQRVRNAEGGYRWFLSRAEPLRASDGTLLQWVGVNLDIEELKRT
                     EQALRESKYRLRQVIDTVPGLLWSTAPDGELTQINQWVLDYSGMRFEDFLHRGWYQFH
                     HPDDLSDVINAFSHAMQTGTSYQTLSRLRRADGEYRWHHIRAEPLRD"
BASE COUNT         1952 a         2928 c         2974 g         2074 t
ORIGIN      
        1 tgtcgacaat gacacgccgc tgttgtgggt catccgggat aacctcggcc tcaccggcac
       61 gaaatttggc tgcggcatcg gcatgtgcgg cgcctgcaca gtgcacgtgg gaggacgccc
      121 cacccgctct tgcatcacgc ctgtaagcag cgtcaccgat gcggacgtca cgacaattga
      181 agggctcgat cccgaagggc aacaccccct gcaaaaggcc tgggtcgatc tccaggttcc
      241 gcagtgcggc tattgccagt ccggacagat catgcaggcg gcagcacttt tgaaggattt
      301 cgcgcatccg agcgatcagg acatcgatgc tgtcatgacc ggcaatctgt gcaggtgcat
      361 gacctatgtc cgtattcgca aagccatcaa gaaagctgct gccgagttac ggaaggacgc
      421 cgcgaatggc taggctccaa gatcggacag atgcgctcgt gctgtcgcgc cgcagctttt
      481 tgatcggcgt ggcgggaacc ggggttgcct ttggttttgc ggctggcgaa gggctagcgg
      541 ccacttcgtc cgcacccgtg acgagccggt tcgacccgac gatctggtac agcgtcgatc
      601 gggacggcgt cgtgaccgtc aacattattc gcgccgagat gggacaacat attggcacgg
      661 cgctcgcccg cgttcttgcc gacgagctcg agacagactg gaacaagatc cggatcgacg
      721 ctgtcgatac ggatccaaag tggggtttaa tggtcactgg cggcagctgg tcggtttggc
      781 agacttttcc cgtctttagc caggcgggtg cggccggacg gatcgcgctg gtcgaggcgg
      841 gagctaagct ccttggtgta ccagttgacc gatgccaagc gcggaatagc gcggtcgtca
      901 caggcgaccg gtccattgca tacgcggaaa tcgtcagtcg cggtttgacg cgcaccttca
      961 ccgccgacga attggcgcag atgccgataa aggccgcctc ggagcgccgc ttgattggcc
     1021 gcaatgtcgc cgcgatggat attcctgcga agacaaacgg taccacccgg tacggcatcg
     1081 acgcgaccgt cgaaggcatg gtctatgcgc ggcccaaaat tccgccgacg cgcaacggcg
     1141 cgaaggtgcg ctcaatcgat gattcggctg ccaggaaggt caaagggtat attagcagtc
     1201 tcgcgcttga ggacccatcc aatacggttc cgggttgggt gatggtgttc gcgagttctt
     1261 atcccgccgc catccgcgcc gctgatcttg ttaaagtcga ctggatagcg ggcgatggcg
     1321 cgaagatctc cgagcaggac gttctcgacc atggcaaagc acagattgca gatccgaacg
     1381 gcggcgtcct gctggtggac gattcggggc ttgagccggc cttccgaggc gcgagttcta
     1441 cgctggagcg aacctatacc acgagcagcg tgctccacta ccaactcgag cccgtcaatg
     1501 cgcttgcctt cgaaaaagac ggtattttcg aaattcatac cggcaaccag tggcagagcc
     1561 ttatactgcc cgtgctcgct aaggcgcttg gcctgccaca ggagcagatc gtgatgcgca
     1621 cctatgcgct cggtggcggc ttcggtcggc gactgaacgg cgattacgcc gtgccggctg
     1681 cgcttgccgc caaggctctt ggcaaaccag tgaagatggt gctgacgcgt cccgacgaca
     1741 cacgcttcga ctcgtttcgc tcgccatcga tccagactct ccgcatggca ttcgacggca
     1801 gcggcaaggt cgcggcgatg gatcatcacg cctctgctgg ctggccaacg atcgtcatgg
     1861 cgccgggatt catggcgaag ggtctatacg ggaagaccta tgatccgttc gcgatcgcag
     1921 gtgcagacca ttggtacagt gtcggtgcgc agcgcgtccg cgcgttatcg aacgatgttg
     1981 ccaacaccgc attccggccc ggctggctgc gttccgtcgg acccggctgg accaattggg
     2041 cggtcgagtc attcatggac gaggcagcgc atatggctgg cgtagatccc gtcgtcttcc
     2101 gcatccgcat gttggatggc aaaggacgaa acgccggctc agcaccgagc tccgtccacg
     2161 gagccaagcg gcaagcagca gttctccaac gcgcggcgca gaaggtgggt tggggcactg
     2221 ccgtgccgaa ggacgcaggt cttggcatcg cgacaacgtt tggccaggaa cgcgacatgc
     2281 cgacgtggac cgcttgtgtc gcccgcgtgc gtgtcaaccg aagcaacggc gtggtcaccg
     2341 ttgaaaagct aaccctcgtt ctcgacgccg gtacgattgt agacccggat ggcgctctcg
     2401 cgcaggtcga gggcgcctcg ctttggggga tcagcatggc cctgcatgaa ggcaccgagt
     2461 ttatcaaagg ccaggtgaag gacgtaaacc tcgacaccta cacgccgatg cgcattggcg
     2521 acgtgcccga actcgacatc gaatttatgg atagcagcga ggcccctgtt ggtctcggtg
     2581 agccggcgac aaccgttgtc gcccctgcga tcggcaatgc gatcttcgcc gccgtcggag
     2641 tgcggctccg gcatttgccg attaggccaa atgccgtgct caaagctcta acccaaaaga
     2701 gctgattcct agggacaccc cgcgcgagat catggcttat gtggagtact cactgggtgt
     2761 gacgcgaggg gccaactttg aacccggcgt gaccgtgtgg gtgagccgct gagtcggcgc
     2821 tgttgcggct ggctggcagc gacgttcctg gagccgatat gcagatagat ccagccctgc
     2881 tcagtacgat ttcgggactc cttggggcgc tcataggagg tagcgcctcg ctgaccgccg
     2941 ccgtttacac tcagcgctac caagatcgac tgcagcgagt cgcgcgtgag gccacgaagc
     3001 gggagacggt ctacgcagat ttcatcatga gcgcttcgaa attgcttctg aacgcttacc
     3061 tgcttgacgg attccaactg gacagcgatg gacagcacct cctcgggctt gcaaaccgaa
     3121 tgaggctctt tgcgccgccg aacatcattg atgaagcaga ggcggtgatc agacagctga
     3181 tcgagatctc gctaaagccg agcgtggacc ttcggaaact cgcgatggtg gagctgtcca
     3241 agaaacggga ttccgacctt cttctacagt tcagcctggc ttgccgggcg gacctggata
     3301 aggtgtaccg tacttttcac tgagtaagac gaactttcga ccgcggacct cccgcttgcg
     3361 cttgtttcgc ccaaggtgaa gcttggcgag tttgccgcat tgatgcgtgc ttgcgcgcca
     3421 agacgttttt gcggcggcgc gcctgcgtgc ctgacatgat ccttaaatcc gaatttagtg
     3481 ttgtgaacgc gtgtttaatg gtggcagtca accgcccttc gtaagctcgc aacattgaca
     3541 tcggatgtcg tactcacccg cattggcggt tcacgcaagc ggaagcgcgg cacgcaaagg
     3601 agatccgaca tgttggacgc cctcacctac gcgaaagcga aacgcgccgc tgtgactccc
     3661 tccgcagacg ttaactctta caccgtgggg agctacctcg cagaacgtct ttcccaaata
     3721 ggtttaaagc atcatttcgc cgttgcaggc gattataatc tcgctctcct cgaccagctc
     3781 ctgtcgaaca aggccttgga acaggtctat tgctcgaacg aattgaattg cggatttagc
     3841 gcggaaggtt atgcgcgggc gcacggtgcg gccgctgccg tggtcacatt cagcgttggg
     3901 gcgctttcgg cgttcaacgc gattgctggc gcctatgccg agaacctgcc ggtcatcctg
     3961 atttccggcg ccccgaacag caacgaccgt gcatcggaac atcttctgca tcacacgctc
     4021 ggtacgcacg atttttcgta ccaactcgag atggcgaaga agatcacctg cgccgccgtc
     4081 tccataacct cggcgaccga cgccccggcg ctgatcgatc acgcaattcg ctcagcgctt
     4141 cgcgagaaga aaccggccta tatcgagatt gcctgcaaca tttctggcgc ttcctgtgct
     4201 gcacccggcc caatcagcgg tgtcctcgct gaggagccga gcgattccga gacgctgcac
     4261 gccgcggtgg aagcggcagc cgcttttctg agggaaaagg aaaagcccgt gttactgatc
     4321 ggcagcaggt tgcgtgccgc cggcgcggaa aaggaagcca tccagctcgc ggatgcgctc
     4381 ggctgctccg tggctgtaat ggctgcggcc aagagtttct ttccggaaga ccacccgcag
     4441 ttcgtcggaa tttactgggg cgagatcagt gcgccgggcg cacgtgaaat tgtcgattgg
     4501 tccgactctc tcgtctgcat cggaacgatc ttcaacgatt attcgaccgt cggttggacg
     4561 gcaatgccga ccggtgcggg cgttctgacg gcggacacca atcgtgtcca ctttggcaaa
     4621 ttcgacttca gcaggatcca cctgcgtgac tttcttgcgg cccttgcccg caaggtcgag
     4681 aagcgcggtg cgacgatggt cgagtataaa cggattcgcg cggagcgccc tcctgaaaaa
     4741 cctgccaaac cggacgcaaa gctcatgcgc gccgaaatcg tccggcagat tcgtccgctc
     4801 gttacctccg ataccacagt tctcgcggag accggcgatt cctggttcaa cggtatgcag
     4861 ctaaaaatgc cggggaatgc ccgcttcgaa attgaaatgc aatatggtca tatcggttgg
     4921 tcggtgccag caaccttcgg ttatgcccta ggggcgcctg atcgccgcgt catcgcaatg
     4981 atcggtgacg gctcttttca gctcacggct caggaagtcg cacagatgat ccggctgaaa
     5041 ctgccggtca tcatattcct gatcaacaat catggttaca cgattgaggt cgagatccat
     5101 gacgggccct acaacaacat caagaactgg gactatgcgg gcttgatcga tgccttcaac
     5161 gccgaagacg gccacggccg cggactgcgg gccactacag gcggcgagct cgcagaagcg
     5221 atcaaggtag cgctcgccaa taagcagggc ccgacgctca tcgaatgtgt catcgaccgt
     5281 gatgactgca cggctgatct catttcgtgg ggccgtcgcg tttcagccgc aaacgcacgt
     5341 ccaccgcgcc cgcaataacg acgcctgtgc gctgatggcc cgatgacggc attgcagcgc
     5401 accggatgct caaaatcaaa cctttgaccg aggaatcgat ccaatgtcgt cgcaggtctt
     5461 agaagcgaaa ctccctacga tggtgaagcc tgcggcggca gcgattcgcc ggccgtacat
     5521 ctgggcctgg ctgctcgtct gcctgttcta tttcatgcaa tatgcgctcc gctccgcgcc
     5581 cggcgtgatg atgcccgagc tgacctccgc cttcggtttg acggcgctgg gtgtcagctc
     5641 gctgctaggc ctatatttct acacttactc ggtgttcggc ctcgttgccg gcgcgtcgct
     5701 cgaccgctat ggcgccaagc ttccgatcac gatcggtgtc ttttgcgtcg cggtcggcag
     5761 tgtcctgttc gggctcggct cgatcggatc ggctgagagc ggtcggctgc tgcaaggcgc
     5821 gggatcggct tttgccttca atggagcggt ttttctcgcc tcgcacggtt tctccgaccg
     5881 ctggctcgct actgcggtcg gcttcaccca gctcttcggc atgctcggcg gcttcgccgg
     5941 ccaattcgtg gtggatccgc tcgtgcatgg gcccatgacc tggcaatcgt tctggatcta
     6001 cggcggcatg ctggtggcgg tcgtcgccgt ctgcgtgctg gtcgttacgc ccggccgaac
     6061 ggaaaaggca cagggctcca tctgggcaat gttcgcgccg tacaaggtgg tgctgaagaa
     6121 ccctcaatcc tatctctgcg gccttgtcgg cggcctgatg ttcatgccca ccaatattgg
     6181 cgatatgatc tggggcgtcc cgttcctgca aagccttggt gtcgaacacg cggaggcaat
     6241 cgcacgatct tcgatggtgc cgcttggatg ggtgatcggc gcgccgctat gcggttatgt
     6301 cgccgatcgg ttggggcgcc gcaagccggt ggtgctcacc ggaattgtcg tgatgctttt
     6361 gaccttcatc ggcatcgtct acatgcccgg tcttcttccc ccctatattg gcggcctcgt
     6421 attcggcatt ggttccggcg cagcgatgat cacctacacc atgatcaaag aggtcaatcc
     6481 cgacaacgtg aaaggaagtg ccacgggcgc catgaacttc ctggtgttca gcttgagcgc
     6541 cctcctggcg cctgccttcg gcctcctgct ggtgcgcttc gccggcggac agccgccgaa
     6601 cctcgggacg ttccagtcga ccgacttggt ctgggtcggt gcgatcgtgt tggctttcat
     6661 tctgacgctg ttcctgcgtg agaccggttc tgcagaacaa tccgtgccgc cggcccggcc
     6721 gtcacgaacg tgaactgtta ttcgtgggat tgggactcgg ccgcatggct ggaacacaac
     6781 atcgcgtggc taaggtcgct gaatgcggcg gcagatccta tccggcatga aaagatttgc
     6841 gaatttggcg tcgccgctct ccaaaccccg cttgcgcttc tgtttgcgag tgacgatcag
     6901 cgctgtcttg gcgtttgcct tggcgcggtt cttcacaatt cctctgcatg gactgtgggc
     6961 cgtgcttacg gccgttgtgg tgactcaaat gagtgtcgga ggatcgctca aggcgaccgc
     7021 cgactacgtc atcggaacga tcggcggggc cgtctacgcc agtgcggtcg cggcgctggt
     7081 gccacatccc acggccgtaa cagctgccgg cgttctcgcg cttgccatag ctccgctggc
     7141 ctatgcagca gccctcaacg caagttttcg cgtcgcgccg ttcacagccg tcctggtact
     7201 catgatctcg agccagcttg gtgaagggcc gatcgagtcg gcattctatc gcttgctaga
     7261 ggtggccatc gggggcgcgg tggcaatggc cgtttcggtc tttgtctttc ccgcacgcgc
     7321 tcattccctg gggcttgctg ctgctgcccg cgtgctggaa aatctggcac aggtgctgcc
     7381 ggtcctgctc acaagattcc gaacaaagat cgataccttc gagaaccaac acattcagga
     7441 tgagatcggc cgcaccgtca atgcgtttga ggacatcgcg gtcgaggccc aacgcgagcg
     7501 gttgatcaat ctcgtcgctg agcccgatcc ggcgatgctt gcgcgagccc tgctgcggtt
     7561 gcgtcatgat ctcgtcatca tcggtcgcgt cggcgccgtg ccgctacccg atcgcattgc
     7621 cgagcgtcta ggtccaccgc ttgcgcggat tggcgcggcc gcaagcgatt ttcttttggc
     7681 aagtgctgct gcgctggtag cgcggcgccc accacctcct ctcagcgcgg tcgaaactgc
     7741 gttcgcggat tgtgtttccg agattgcggc cctccgcgaa gcggggctga tgcgggcatt
     7801 gcccggcagc gaactcgagc gcatttttac gcttgggttt gcactccagc agctacagca
     7861 ggacttgttg gatcttgcgc ggtccgtgcg ggagtgggcg caagatccag acctgacgag
     7921 agcaagcttg cggcctgacg cgcagactct attcgggata tttgtgatcc cgccgcttta
     7981 cgtcatcgcc tcagcgctct caaaatacgc cgactgctgc atcgccaagg ccgttacata
     8041 atcatttatc agcacgttgc gctcgtcagc gacgcgggca cggtcggcat cggcgtcgag
     8101 cagtgcggtc acaaagcggt cagcgcgccg ggtcagtgaa tgtacgagct caaccaaatt
     8161 tggtgaaagc tcgcggacga aaaacaggcg gctgactacc gcggcgcaaa taataccaag
     8221 cacgatctct gtgaatcgcg cttcccacca gacgataggc tccatccggt tgaagggctg
     8281 ccgggatgcc gacgatcgcc accgtgtaac cggccagttg aaagccatac gacgcaaaat
     8341 tgcgcaccgc ccggcggcaa agttgcagaa gcaaatccag atagcggctg caatcacaaa
     8401 gagctcgccg tattgagcaa gagcaaacat gagcgcagtc gtaacgaaca gcctgcagta
     8461 gtaccgagaa tgcgatcgaa actcttggtc agaacgaagc cgctatccgg ccgcgaaacg
     8521 acaaagactg tcagaaatga ccaccgcgga tcgtcaagcc caagccagaa tggaatatcc
     8581 agcgcaagca aggaggcgac gtaggtcttg actgcaaatg tcagtccgac ttctgtccca
     8641 tgattcaacc agcctttttt tgaacaggct gccgctcgcc ggtgcgcttg agaggacgcc
     8701 tctcatcaat tgaactgctt ttggccatct ctactgtcac cacttgcttc gtaaggcgag
     8761 ttaagcgatt taaagccgat taaattttta gaaatacacg tgcaccacat cgggtcctga
     8821 gcggtccaaa atcggtacaa tggcggcggg cctgtccctg tgccggagac gaagtacgtc
     8881 tcgtgtctct ttgtggcgat caaccgatgg ctggcaattc tcaggcgatg cggtaagatt
     8941 tcttcacggc cgacaacggc cgcggtgcgt ggcgcaggtc aggctttgtc agccgaattc
     9001 aagttggaag ctccatgccg gagctgacag atggtgccgc attcgatgaa cggcgcgtac
     9061 tcggacggcg cctctcacga attttttgcg ataagtttgc ctgactaatg tatgcagagc
     9121 gaaagagcta gccatgggca acggcgctcg gtcgaagcac aaaacccgca gacgcaagat
     9181 gactgtcgac cttgatgagg gcaagaaggc cgaagaacag ccgggattcg tggcacagtt
     9241 gcgagccact ctaaatgtga ttccggcgta tacttggtac gcggctccgg ccggcgggct
     9301 caccttcgtg aacaaacgaa ctgcggatta ccttggtctt ccgaaagatc atcccctacg
     9361 cttcggcatc gacattggcg cacagtggga cgcccatatc ccgttgttgc atcccgacga
     9421 ccgcgaagaa tcacgcaaag cctggtcaac ctgtctgcgc acgggcgagg ccgctgagtt
     9481 tagtcagcga gttcgtaacg ctgaaggagg ctaccgctgg ttcctcagtc gcgccgaacc
     9541 gctccgggca agcgatggaa cgctgctgca gtgggtcggg gtgaatctgg atattgaaga
     9601 gctcaagcgc acagagcaag cactgcgaga aagcaaatac aggctccgtc aggtcatcga
     9661 tacggtgccc ggcttgctct ggtcaacagc gcccgatggc gaactaactc aaatcaatca
     9721 atgggtttta gactatagcg gtatgcgatt tgaggatttc ctgcatcgtg gttggtacca
     9781 attccaccat ccggatgatc tttccgacgt tataaatgcc ttctctcacg cgatgcagac
     9841 cggaacttcc taccagacct tgtcccggct acgtcgggcg gacggcgagt atcgttggca
     9901 tcatatccgt gctgagcctc tacgtgat
//
LOCUS       DATILV010000203         2552 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1072196, whole genome shotgun sequence.
ACCESSION   DATILV010000203 DATILV010000000
VERSION     DATILV010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2552
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1072196"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            392..1195
                     /locus_tag="VLJ17_04600"
     CDS             392..1195
                     /locus_tag="VLJ17_04600"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HSV22291.1"
                     /translation="MPKSWFAVAAAFAMVSGAGANTREGRTCETCTKHAAVEAHQTAE
                     ERSLKGYDIASTGLQPSYPKNYMCPPLTSLYASWIDVDGTRRKERHSGVDGGRLGDPV
                     LAPAPGKVRRVWVADWGEGHEGAVLLRHTREDLNLADGPRFFYSEFDHVKYSDVSSLK
                     EGQRIERGERIGQVFRPGGKSIYLPEVHFEVYEVDDDNALEWRVNERGTEFFTNPKSR
                     LIDPLYLLSLEVRPSSQLEAPIQPFETDRSYRGFKGFTYFLECRKRGLR"
     gene            complement(1268..1516)
                     /locus_tag="VLJ17_04605"
     CDS             complement(1268..1516)
                     /locus_tag="VLJ17_04605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22292.1"
                     /translation="MEMIQAGSTSSDKPYLLVGRNSRGHWIVRDRSCRHGGLFASLAA
                     AQRYARLQSVSRDATIVMVPGCLELDLSAPSPHVHEHS"
     gene            1962..>2552
                     /locus_tag="VLJ17_04610"
     CDS             1962..>2552
                     /locus_tag="VLJ17_04610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HSV22293.1"
                     /translation="MTAPINKRPAAIRVALPFVFRHWLNQPAVALTVAGGLLGATVAD
                     LFMPVFSGRLVDALTRGAADPAARRATLSAFGAIVTLGLLSVILRLTGLRAIVPFTLR
                     IMCDVARDAFVRVQRFSTDWHANSFAGSTVRKITRGMWALDLLNDTILMALLPSLVVL
                     LGSMILLGLHWAALGLVVGLGALVYVSMTTVFSTRYI"
BASE COUNT          499 a          733 c          765 g          555 t
ORIGIN      
        1 ttgattggag tagcggcgct taccgaggac gggtcatagg gatcataaat cagcagcccg
       61 gcaaatacgg cggtcacaag cattacgaca gagattctcc acatgacaca ctcgctacgc
      121 ttgtatgact atattttctt gatgtcggcg gaaaaacgta tctatgtttt agtcgaccgc
      181 atcactgctt cggttcaatg ccaagcttgc gcgatgcaca aattcctgga tagacaattg
      241 gcttcgaaaa aagtgcgaaa tcactgattt cttttgcgaa agtgaatagc cctgaagagc
      301 ctcaagctgg cactaggttt tctgctcccg gtggatgttg gctggatgcg gcggcaacca
      361 tataatgcag cgtaagctgg cggagttccg gatgccaaag agctggtttg ctgtggcggc
      421 agcatttgcg atggtctcag gagcaggcgc aaatacgcgc gagggtcgca cttgcgaaac
      481 ctgcacgaag cacgccgcgg tggaagccca ccagacggcg gaggaaaggt ccctcaaagg
      541 ctatgacatt gccagcacgg gacttcagcc cagttaccca aagaattaca tgtgcccgcc
      601 gctcacttcg ctctatgcga gctggattga tgtcgacggc acccggcgca aggagcgtca
      661 ctccggcgtc gacggtgggc gcttgggcga tccggtcctt gcaccggcgc ccggcaaggt
      721 gcgccgcgtc tgggtcgccg actggggcga gggtcacgag ggtgccgtgc tgttgcggca
      781 cacgcgcgaa gatctcaacc tcgcggacgg gccgaggttc ttctactcag agtttgatca
      841 cgttaagtac agcgatgtca gcagcctcaa ggaaggccaa cgaatcgagc ggggcgagcg
      901 gatcggtcaa gtgtttcgtc ccgggggcaa aagcatctat ttgccggagg tgcacttcga
      961 agtttacgag gtcgacgacg acaacgcctt agagtggagg gtgaacgagc gaggcaccga
     1021 atttttcaca aatccgaagt ctcgactgat cgacccgctg tatcttctgt cacttgaggt
     1081 gcgcccgagc agccagctcg aagctccgat ccagccgttc gagaccgatc gaagctaccg
     1141 tggattcaaa gggttcacgt atttcttgga gtgtagaaag cgcggacttc ggtaacgtcc
     1201 ggttacgatt gcgtggcctt ggacaagaac ctcacgattg aggcggccct accccgtttg
     1261 gtctcgatta ggaatgctcg tgcacatgtg gcgagggagc cgataggtcg agttcgaggc
     1321 agcccggaac catgacgatc gttgcatcgc ggctaacgct ttgcaggcgc gcatatcgct
     1381 gcgcggcggc cagactggca aagagcccgc catgccgaca ggagcgatca cgcacaatcc
     1441 agtgaccgcg gctgttcctg cccaccagca agtatggctt gtccgacgat gtcgatcctg
     1501 cttgaatcat ttccataata ggcggctcct cgagaaaatc agacattctt gacaattagt
     1561 caccaacagc gccgtttggt tcgaagcggc gctctcgttt aatcccgtta ttttcagaga
     1621 gctccataaa cgcaggcaaa cgctgggatt tcgcgcagca ttggggacag tttcgattgc
     1681 caaacctccc cgatgcattt atattaaacg ggtcgtcgct cgaaccgggg aggatttgca
     1741 tgttcatgtc ttattcgcac atcgtatcct cgcgtccgaa gcccatgctg gatgcccgcg
     1801 tcgccctttg agggcgtttt tcgacagcat cgatcgggct gacatcccga tctctaactt
     1861 ccaagcaagt cactgatttc tttaacgacg ctggcgttcg gcttgtttgc cgccgcgcgt
     1921 caccgaatgg agccggcgtg tgcgcatagc cggatgacga catgaccgcc ccaatcaaca
     1981 agcgacccgc cgcgatacgc gtagcgctgc cttttgtttt tcgccactgg ctgaatcagc
     2041 cggccgttgc cctcaccgtg gccggcggcc tgttaggggc gaccgtcgcc gacctgttca
     2101 tgccggtgtt ctcgggccgt ttggtcgatg cgctgacgcg tggcgcggcc gaccccgccg
     2161 cccgccgcgc cacgctatcg gccttcggcg ccatcgttac gctcggcctg ctgtcggtaa
     2221 tcctgcgctt gactggattg cgggcgatcg tgccgttcac gttgcggatc atgtgcgacg
     2281 tggcacgcga cgccttcgtg cgggtgcagc gtttctcgac cgactggcac gccaacagct
     2341 ttgccggctc gaccgtgcgc aagatcacgc gcggcatgtg ggcgctcgac ctgcttaacg
     2401 acaccatcct gatggcgctg ttgccgtcgc tggttgtgct gttggggtcg atgatcctgc
     2461 tcgggctgca ctgggccgcg ctcggcctgg tggtcggact gggcgccctg gtctacgtgt
     2521 cgatgacgac cgtgttctcg acgcgctata tc
//
LOCUS       DATILV010000204         2068 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1839939, whole genome shotgun sequence.
ACCESSION   DATILV010000204 DATILV010000000
VERSION     DATILV010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2068
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1839939"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(93..1781)
                     /locus_tag="VLJ17_04615"
     CDS             complement(93..1781)
                     /locus_tag="VLJ17_04615"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HSV22294.1"
                     /translation="MPVAGSDSHPPPFATVAAAQAAEPSLEPEDAVLLTTGASGITIK
                     PETTNGQPNGVRNPDTRILNVTNLPNGPFQQTAKDAQGNGLAYDAYTEDTIHRFFQMW
                     QQSDCSITHATPENPSGCLADLLPYVITTFAGLAEEGMGTSMAFFNMNQGDAPVLKKL
                     AQEFSIADNYHQAVMGGTGANHIMIGTGDVYFFNNTFAENGIFNANSFQPVPPPPVPG
                     AILGLPSFVTISLVANPDPVQGSNNVYKNDIAATLGEYVNCSDPAQPGVPAITSYLAT
                     LPYKLSPTSCAQNTFYAINNFFPGYHPNGTPANPLSPKQAADGSDFFFIPPQNLPTIG
                     DALNAKNVSWAYYGGGFNAAVAGLPNAFCPICNPMQYAASIYGNPAQIKAHTGDITDF
                     FTAVANDNLPSVAFVKPSGLVDGHPQSSKLNLFEALLDNIVDQVKGKLELFAETAIIV
                     TWDESGGFYDSGFIQPVDFFGDGPRVPLLVISPFSHGGRVVHTYYDHVSITKFIERNW
                     GLKPLSSRSRDNLPNPIMDEDDNRYVPRNMPAIGDLMEMFHFGDHDDQGHDHDG"
     gene            complement(1920..2033)
                     /locus_tag="VLJ17_04620"
                     /pseudo
     CDS             complement(1920..2033)
                     /locus_tag="VLJ17_04620"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
BASE COUNT          380 a          566 c          688 g          434 t
ORIGIN      
        1 gatttgcacc ggacgatgct tcgcatcgcc aggagcaaat cgacctctcc ccagcgggga
       61 gaggtgaacc gaaccctttc aagcactaac gcctagccat cgtggtcgtg accctggtcg
      121 tcatgatcgc cgaagtggaa catctccatg aggtcgccga tcgccggcat gttgcgcggc
      181 acgtagcgat tgtcatcctc gtccatgatt ggattgggaa gattatcgcg gctgcgagag
      241 ctcaacggct ttagccccca gttgcgctcg atgaacttgg tgatcgagac gtggtcgtaa
      301 taggtgtgga ccacgcggcc gccgtgcgag aacggcgaga ttacgagtag cggcacgcgc
      361 gggccgtcgc cgaagaagtc gaccggctgg ataaagcccg aatcgtagaa gccgccgctt
      421 tcatcccagg tgacgatgat cgcggtctcc gcaaacaact ccagctttcc cttgacctga
      481 tcgacgatat tgtcgagcag cgcctcgaac aggttcaact tggaggattg cgggtgtccg
      541 tccacgaggc cgctgggctt gacgaaggca accgacggca ggttgtcgtt ggccactgca
      601 gtgaagaagt cggtgatgtc acccgtgtgc gccttgatct gggcgggatt gccgtagatc
      661 gaagccgcat actgcatcgg gttgcagatc gggcagaacg cgttgggcag accggcaacc
      721 gctgcattaa agccgccgcc ataataagcc cacgagacat ttttcgcgtt cagcgcatcg
      781 ccaatggtcg gcaggttttg cggcggaatg aagaagaagt cgctgccgtc cgccgcctgc
      841 ttgggcgaca acggattcgc cggcgtaccg ttggggtggt aaccggggaa gaagttgttg
      901 atcgcgtaga aggtgttttg cgcgcaactc gttggcgaca gcttgtaggg tagcgttgcc
      961 agatagctgg tgatggcggg aacgccgggc tgggccggat ccgagcagtt gacatattcc
     1021 ccgagcgtgg cggcgatgtc gttcttgtag acgttgttgg agccctgcac cgggtccgga
     1081 ttcgccacca gcgagatggt cacgaaagac ggcaatccca ggatcgcgcc cggcaccggc
     1141 ggcggcggca cgggctggaa gctgttcgcg ttgaagatgc cgttttccgc gaaggtattg
     1201 ttgaagaagt agacatcgcc ggtaccgatc atgatgtgat tggcgccggt gccgcccatc
     1261 accgcctggt gataattgtc ggcgatcgag aattcctgcg caagcttctt cagaacgggc
     1321 gcatcgccct ggttcatgtt gaagaaggcc atcgacgtgc ccatgccttc ttccgccaga
     1381 cccgcaaagg tcgtgatcac atagggcaga aggtcggcaa gacagccgga cggattttcg
     1441 ggtgtcgcgt gcgtgatgct gcagtcggat tgctgccaca tctggaagaa gcggtgaatg
     1501 gtgtcttcgg tgtaggcgtc gtaggcaagc ccgttgccct gcgcgtcctt tgccgtctgc
     1561 tggaacggcc cgttcggcag attggtgacg ttgaggatgc gcgtgtcggg attgcgcacg
     1621 ccgttgggct gcccgttcgt cgtttccggc ttgatcgtga tgccgcttgc accggtcgtc
     1681 aacagcacgg cgtcctcggg ctctaggctc ggctcggccg cctgtgctgc ggcaacagtg
     1741 gcaaacggcg gcgggtgact atcgctgcct gccaccggca cgccattcag gtcaggtggc
     1801 ggcagcgtcg tgaaggcggt tttgctgaca tccggcgcgc tgatgaaata tttgggctgc
     1861 tgcgacaccg tgaactgggc ggccttcttg aagttcggtc ccggcgtgcc gtcagtgttg
     1921 acgatgccct tggacaggag attggcaata tgctgaccat cgcgcgggcg gaacgtcccg
     1981 aaggcgtgat cgaagctgga attctcggcg atgacgacga tgacatgctt gatcggcgtc
     2041 gtcgtgggtg tcttgtcgac gctcttgt
//
LOCUS       DATILV010000205        14312 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2607083, whole genome shotgun sequence.
ACCESSION   DATILV010000205 DATILV010000000
VERSION     DATILV010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 14312)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14312)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14312
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2607083"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(67..1374)
                     /locus_tag="VLJ17_04625"
     CDS             complement(67..1374)
                     /locus_tag="VLJ17_04625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22295.1"
                     /translation="MALTATDLFNDATTREIGGVGPDQVNLIVSDLIGVQQMLSAADP
                     QINNLSDLHTHVIINQLNEEIASVENANAPTTGTITAGTDLGQFVGRSINDIHRDIID
                     IAQGDAGVQALFNPTPLPALNTPAAPFHDNADQTKFITQWIQDSNHLGQAAITIENNG
                     FTGDIAGLVQQIQTYASNSNAFDQAQGGLWSARFWNEFRTDGTSGTAAAALIEGLQTK
                     NAGEINAAAEQLAANSGDVAGNNLMGDGGSFAGVVADAQATAVTPASNGGGAAGGGAA
                     GGGAAGDGAAGGGAAGGVAAGGGAAGGGAAGGGAAGGGAAGGGGDGGAGGGGGTTQQG
                     GDPHSGGNQAGTPGSSPDHLVADLTALLQGGGQNSLAAVFADLQAVAQAAGVQNNGVT
                     TLLTDLLVGAAGQPGSGAASSGDPGPADPAPVHHHGFEHMWHH"
     gene            1948..3741
                     /locus_tag="VLJ17_04630"
     CDS             1948..3741
                     /locus_tag="VLJ17_04630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I secretion system permease/ATPase"
                     /protein_id="HSV22296.1"
                     /translation="MNLRFDLNSDDPVTAGLRASARQLLGVAAFSGVVNLLTLSGSLY
                     MLQVYDRVIPSRNVATLAGLSLIVLFAYILQGYFDALRTRMLARIGTLFDAGLQKPIY
                     QALAILPLRGVRPIVAQQPLRDLDQVRTFLSGVGPTAFLDMPWIPIFLVALYIFHPAI
                     GVAATFGAAAIIAVTLATERQARGPAQAAMETSAHRQVLADATRQNADIIRALGMTDR
                     FTERWLRGNERFLEINIRTMDTHANLGSGAKVLRYVLQSSMLGIGAYLVVIDQASGGI
                     MIASSIMMGRALAPIEVALSTWKQLVAARQGIVRLREIIKATAQPQSPAVTLPPPRQG
                     LMVRDLTVFAPGTNRQIVSNISFSLEAGMGLALLGPSASGKSSLARALVGIWPAAKGA
                     VRLDGAALEQWHCDDLGQHLGYLPQNVALFDGTIADNIARFDPSASSDSIIEAAQIAG
                     AHDMILRLPDGYATQIGESGASLSSGQRQRIGLARAVFGNPFLVVLDEPDANLDTEGE
                     VALTRTIAALRTAGRIPIVVSHRANVLGALNMAMLLYNGRMLSFGSRDQVFEHIARAA
                     GRQVPVAPVNHGATAEVSMGQQLSRGAHATA"
     gene            3728..5515
                     /locus_tag="VLJ17_04635"
     CDS             3728..5515
                     /locus_tag="VLJ17_04635"
                     /inference="COORDINATES: protein motif:HMM:TIGR01843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030253 - protein secretion by the type I
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HSV22297.1"
                     /translation="MQPRSTRPNDRVYPANGRLRGYAGRRPAKDNAVIVGVGAAARPE
                     ARGQILTDNSSKGYDGIVVVVGRKSGARSHRLPISVIHSSVREALHRATAGSFPVLKR
                     VGNFFLNRGDGTDESISVIHSPVREAVHRATAVCSPVLKRVGDFFLNPSDGAGESRAD
                     GAGLKAYILRSFERERVAGRRVLAAALIVAGGWATFVPLSGAVVISGTVVTESNIKNI
                     QHPSGGIIARIAVRDGMRVREGDLLAKLDDTQVRANFQVVTTQLDEIRARIARLTAER
                     DDRTGRALLRPVTFTNREDDREQLLTSESSLLRARADARKSQRELLRNRIDQLNQEIS
                     GLDAQIKSKRTQSELIGRELEGIQSLYDKGLTTLPRLTSLQREAARLDGERGQLVSTI
                     AETRAKISESELQLVKLDQDFRADVMKDLREAQDKEAELAERVVAARDQLDHIDLRAP
                     TAGIVHQLSVHTIGGVVRPAEVIMVIVPESDELQIDARLPANEIDQVYRGQRTLVRFS
                     AFNQRTTPELSGVVSHVSADITRDAQSNISYYTVRISLPGEELARLSGLQLISGMPAE
                     VFVQTGSRTMMSYLFKPINDQLHRMFRER"
     gene            complement(5489..6580)
                     /locus_tag="VLJ17_04640"
     CDS             complement(5489..6580)
                     /locus_tag="VLJ17_04640"
                     /inference="COORDINATES: protein motif:HMM:NF012402.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HSV22298.1"
                     /translation="MRKNCRVTIDDQVLFAACGDVLLDAALRNGVDIPHDCRSGHCGT
                     CQVRVLEGLTIGGECGEPGAVRACQSRIISDLKLEIEALPDVQMATGQVRAIKKRAPD
                     VVEIDIEPSRPVVYLPGQYLRVQFRGYPMRCYSPTASMENFAEREFLHLQVRRIRRGR
                     VSAAIGSDIRVGHRVRMQGPFGSAFLRPASLNRLVLVASGTGFAPIFSIAIAAIREHR
                     RRRIALVVGAQTIESLYMTNALCKLARYPNVTIIPVVKMPQNLTTVLRTGNVPDHIPE
                     LSLEDTVHACGPPRLVEAVSRMAAEVGATCHCDPFIPQDANGNALSRALDWFNGVKRS
                     PAAADDVTRRSPPLQPVVSNVSPFAEHAV"
     gene            complement(6580..8457)
                     /locus_tag="VLJ17_04645"
     CDS             complement(6580..8457)
                     /locus_tag="VLJ17_04645"
                     /inference="COORDINATES: protein motif:HMM:NF021010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ethylbenzene dehydrogenase-related protein"
                     /protein_id="HSV22299.1"
                     /translation="MRRLAVRRRTDIGTILLHWLVVITLVTSIATGLRIAADEPEHAW
                     LLAFDRLLPKQVVWTGHLPAALILCALAVAYVAYIMSARLFSRIQIDFVRMAGLFKTA
                     QARWSAINVLLCWIFFAAMVAEFVTGAQLYFGQASYVVVQIHLLGTWIILACAPAHIA
                     THWAIGGFLQLVRIFRPSGFASAPPPFDPMALVAELNSKVAELNSQVAHAKRDQMKAN
                     RSGQKPPESSRPQMDDDPRGRHRPRGAGTTIQANPLVVALAAALLTVGFVLPADRAIQ
                     DRLYIRKIATTELPILDGDASDPVWLTVKPLTVWTAFGGNFAGKGETKIDVRAVHDGE
                     RVYFCFVWDDPTRSLKHLPLIKENDGWHVLQDRYDVADAHEYHEDKLAVLLTQADTIV
                     PGDRTFHVGPAPLADKPATLSGRGLHYTRDPNASIEVWQWKASSSGQYGWIDQDRFGV
                     PVAPTPAQSEGRSPYRGGFIADPRGAKVYAMNFEPQLLGGYRQAVQPRRLPKNWKATW
                     EALGRVDLDPNHSESDGARWWMTEAESEPYSRERDNQIPVGAIIPGLIVGNPPNENAG
                     EVRGVARWAAGRWMLEASRSLKGGAVPIATGTRMRLSAFDHAQIHHTRHLRPIFLEVE
                     Q"
     gene            complement(8853..10232)
                     /gene="der"
                     /locus_tag="VLJ17_04650"
     CDS             complement(8853..10232)
                     /gene="der"
                     /locus_tag="VLJ17_04650"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HSV22300.1"
                     /translation="MSLTVAIVGRPNVGKSTLFNRLVGRRVALVEDTPGVTRDWRDGA
                     ARLGDLTFTIIDTAGLEESGPESLSARMRVQTVTAIARADAVFFLIDARVGIMPDDRV
                     FANVLRRIGTPTILVANKAEGRKGLAGAYEAFDLGLGEPVAISAEHGDGLADLYDALR
                     AAVPTQIGMPGEDIEENGDQEESAAPKKPIRIAVVGRPNAGKSTLINRLLGEERLLTG
                     PEVGITRDSIAVPLTWRGRHFLVHDTAGLRRRSRVEGKLEKLSVADALEAIRFAEVVI
                     LLIDATVAFEEQDLRIADLIEREGRALVLGINKWDLQEAAPGAIAKLRQQADRLLTQV
                     RGVPIAAVSGLTGAGLDHLIKAVLDIHALWNKRIVTNALNRWLDEVRAAHPPPAVSGR
                     RLKLNYITQPKTRPPSFVLFCSRADAVPDSYRRYLVNALRESFALPGVPIRLTLREKA
                     NPYAGKEKR"
     gene            complement(10278..10754)
                     /locus_tag="VLJ17_04655"
     CDS             complement(10278..10754)
                     /locus_tag="VLJ17_04655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22301.1"
                     /translation="MRPLARLALAAVLAAAVPILSACESLDTFDIFDNKKKLAGERKP
                     VFPEGVPGVATGVPPELVKGYHEPEGGTPDPAKAAAQAAAEPVAKPKPKSKPAPQRTA
                     SKPAPQPQAPADPYAAAPTRAPASQPAPQPAPQATAPWPAVQPQAAWPGAPGAVAR"
     gene            complement(10764..11417)
                     /locus_tag="VLJ17_04660"
     CDS             complement(10764..11417)
                     /locus_tag="VLJ17_04660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV22302.1"
                     /translation="MSDIFTEVDEEVRREQLKKLWERYGNYAVAAAFLVVAAVAAWRG
                     YDYWQTRRAAEAGAAYDAAARLAEEGNHGEAEAAFAKLVTEGTAGYRLLARLREAAEI
                     SERDPKAAVAAYDQIAGETTGQPLISELAAVRAAFLLVDTAKLDEMTQRLEPLAGPSG
                     VFRHTARELLALAAWRNHDTAAMRRWTVAAKNDPEAPSGVRSRMDVLASLLPEAGKP"
     gene            complement(11750..12589)
                     /gene="panB"
                     /locus_tag="VLJ17_04665"
     CDS             complement(11750..12589)
                     /gene="panB"
                     /locus_tag="VLJ17_04665"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HSV22303.1"
                     /translation="MSTHVPPGQTTQKRLTAPDIRARKGGAPVVMLTSYHAHTARILD
                     AHCDVILVGDSLGMVMHGLETTIPVTLDMMILQGHAVMRGSRRALVVVDLPFGSYEVS
                     REQAFMTAARVLKETGCGAIKLEGGQRMAETIRFLTERGVPVMGHVGLTPQSVNALGG
                     FRAQGRDRADWAPIEADARAVAEAGAFSVVLEALAEPLAAQITREIAIPTIGIGASPA
                     CDGQVLVLEDMLGLSPWVPKFVKRYTSLGPAIEAAVSAYAAEVRNRTFPGPDNVYAVK
                     KKV"
     gene            complement(12591..13190)
                     /locus_tag="VLJ17_04670"
     CDS             complement(12591..13190)
                     /locus_tag="VLJ17_04670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrU family protein"
                     /protein_id="HSV22304.1"
                     /translation="MGLLVLVLGLVLFLGPHVFVTMRPHRDAAMKRLGEWPYKGAFAA
                     VSIIGLYVTGKGFGMYDAAGPIVLWTPPAWTRHITEALMLPACIFVAAAYLPGNIKRV
                     LKHPMLVGVKTWAVAHLAANGDLGGIILFGLVLAWAVYDRITLKRRSDPGGPLIPQGG
                     RNNDIAAVVVGVILYLALGLVFHPLVVGRHVFGATAFGT"
     gene            13608..14036
                     /locus_tag="VLJ17_04675"
     CDS             13608..14036
                     /locus_tag="VLJ17_04675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22305.1"
                     /translation="MAEFSLDETADKVFDALDSVDIQDCWDRAGGSRDGYTSPDEAAV
                     DIVEEELQPFFDQVERYHALDMPEQEAAYCMGVILGIYRFENESKSEFKQLAEDIPVE
                     CAGNLLEEWQERNPEPAGIEAMDAFMRERCPKWAEWLKDQ"
     gene            14120..>14312
                     /locus_tag="VLJ17_04680"
     CDS             14120..>14312
                     /locus_tag="VLJ17_04680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22306.1"
                     /translation="MSTLVAGIHVFLAALEQARPRRDKPGHDSGKVVQYGRIPAAGPQ
                     QYQKSCCPCKEAAIFSATVG"
BASE COUNT         2829 a         4402 c         4272 g         2809 t
ORIGIN      
        1 ccaaacgcta gcgcccggca acgattggac ggggcatgtc cttgccccgt ctgtcgcgcc
       61 gtaacgttag tggtgccaca tgtgttcgaa cccgtgatgg tgtactgggg ccggatcagc
      121 cggtccaggg tcacctgacg atgcagcacc gctgcccggc tgccccgctg cacccaccaa
      181 cagatcggtc aacaacgtcg tcacgccatt gttttgaacg ccagcagcct gggccaccgc
      241 ctggaggtcg gcaaagaccg ccgcaaggct gttttggccg ccgccctgga gaagagctgt
      301 caggtccgcc accaagtggt ccgggctgct gcccggagtg cccgcttgat tcccccctga
      361 gtgtgggtcg ccgccttgtt gcgtcgtacc gccgccaccg cccgctccgc cgtcgcctcc
      421 accgcctgct gcaccgccgc ctgctgctcc accgcctgct gcaccgccgc ctgctgcacc
      481 gccgcctgcc gcaacgccgc ctgctgcacc gccgcctgct gcaccgtcgc ctgctgcacc
      541 gccgcctgct gcaccgccgc ctgctgctcc accgccattg ctcgccggtg tcacggccgt
      601 tgcctgcgcg tccgctacca cacccgcaaa gcttccgccg tcacccatga ggttgttgcc
      661 cgccacatcc ccggagttcg cagcgagctg ctctgcggct gcattgattt ccccggcatt
      721 tttcgtctgc aatccctcga tcagcgcagc cgctgccgta cccgacgtgc catctgtccg
      781 aaattcgttc cagaagcgcg ccgaccataa gccgccttga gcctggtcga aggcgttcga
      841 attactcgcg taggtctgta tttgctggac cagtccagca atgtcaccgg tgaagccatt
      901 attctcgatc gtgatcgccg cctgcccgag atggttactg tcttggatcc attgagtaat
      961 aaatttcgtt tggtctgcat tgtcatggaa cggtgcagcg ggggtgttca aggctgggag
     1021 aggcgtcggg ttaaacagcg cttgaacacc cgcgtcgcct tgagcgatat caataatatc
     1081 ccggtggata tcattgatcg agcgcccaac aaattgtccg agatctgttc ccgccgtaat
     1141 tgtgcccgtt gttggagcgt tcgcgttctc gacggatgca atctcttcat tgagctgatt
     1201 gatgatgacg tgcgtgtgca gatcgctgag gttattgatc tgcggatctg cggcacttaa
     1261 catctgctgc acgccgatca ggtccgagac gatcaggttg acctgatccg gaccgacgcc
     1321 gccaatctca cgggtcgttg cgtcattgaa aagatccgtt gctgtcagag ccatctatct
     1381 tgtctccccg cttatgaacg ttagtccgaa tcgatcacaa tgccagccgc attgcgacta
     1441 atttgcccct gagtagaagg cgatcgatgc cgcatcggaa aaggttagta ttgttatgat
     1501 tacaacaagg ttcccccgtg ttcgtttgcc cgccatcatc gtggcagcat tgcatttgca
     1561 atggcaatac gacaacaacg agaaccgctg cgttcgattg agtgatcata tgaaggttaa
     1621 ttagaggcag gcctaccgcg ttatcgacgt tatcgacatt aatataattg ctggagattg
     1681 ttgacgcggc gatttcgctt gtgacgcgcg ttcgttagcg catttttttg aacgtgccgt
     1741 tctttcaccc gatttgttag ttacgcaagc gtcgcattat tgaccaggtc gtagatacct
     1801 atgaggtcag ggttaacttc gatggttagc ttcgacgctt ggcacgtttg ttgaacttga
     1861 gcgtgcgcga agaaggactg cgatatcaat gttaaagcaa ctgaatttga tgacctgcac
     1921 gctgccgtgt tgtccgaggg gcaagcgatg aatctgagat tcgacttgaa ttcggatgac
     1981 cccgttactg cgggattacg ggcgagtgcg cgacaattgt tgggcgtggc ggcgttcagc
     2041 ggtgtcgtaa atttgctcac attatcgggt tcgttgtata tgttacaggt gtacgatcgc
     2101 gtgattccca gccgcaatgt ggcgacgctg gcgggccttt cccttatcgt cctgttcgca
     2161 tacatattac agggttattt tgatgcgctg cggacccgca tgctggcacg catcggcacc
     2221 ctgttcgacg caggattgca aaagcccatc tatcaggcgc tcgctattct tccgctgagg
     2281 ggcgtccggc ccattgtggc gcagcagccg ttacgcgatc tagatcaagt gcgcaccttc
     2341 ctttccggcg tcggcccgac ggcgtttctc gatatgccgt ggataccgat ctttctcgtc
     2401 gctctttaca tctttcaccc tgcgatcgga gttgccgcga cgtttggtgc ggctgcgatc
     2461 attgcggtga cccttgcgac cgagcgccaa gcgcgaggtc cggctcaagc cgcaatggag
     2521 acgagcgcgc atcgccaagt gctggcagac gcaacccgtc agaatgccga catcattcgc
     2581 gcgctcggaa tgactgatcg tttcaccgaa cgatggcttc gcggcaatga acgttttctt
     2641 gagatcaaca tccggaccat ggatacccat gccaatctgg gatcaggcgc gaaagtcctg
     2701 cgatatgtgc tgcagtcatc gatgctggga attggcgcgt atctcgtggt catcgaccaa
     2761 gcttcaggcg gaatcatgat cgcctcatcg atcatgatgg gccgcgccct tgcgccgatc
     2821 gaggtggcgc tgagcacttg gaagcaactc gtcgcggcac ggcaaggcat cgtcaggttg
     2881 cgtgaaatca tcaaagctac ggcgcagccc caaagtccgg cggttacgct gccgcccccg
     2941 cgtcaggggt tgatggttcg cgatttaacg gtatttgctc caggcaccaa ccggcagatc
     3001 gtctcaaaca tttcgttctc gctcgaagcc gggatggggt tggcactact tggtccgagc
     3061 gcttcgggaa agtcatcgct tgcgcgcgcc ctggtgggga tctggcctgc ggcgaagggt
     3121 gcggtgcgac tcgacggcgc ggccctcgaa cagtggcatt gcgatgatct cggacaacac
     3181 ctcggatatt tgccgcagaa tgttgcgctg ttcgacggta ccatcgcgga taacattgcg
     3241 cgctttgatc cctctgcgtc gtcggattcg atcatcgagg ccgctcagat cgccggcgcg
     3301 catgacatga tcctacgact ccccgacgga tacgcgactc aaatcggtga gagcggagct
     3361 tctttgtcct ccggccagcg gcagagaatt ggtctcgcgc gggccgtctt cggcaatcca
     3421 ttcctggtgg tgctcgacga gccggacgcc aatctcgata ccgaaggcga agtagcgttg
     3481 acgcggacga ttgccgcgct gcggaccgct gggcgaattc ccattgttgt gtcgcaccgt
     3541 gcaaacgtgt tgggggcatt aaatatggcg atgctgctct ataatgggag aatgctgagc
     3601 ttcggaagcc gcgatcaggt cttcgaacat atcgctcgag cggcggggcg acaggtgccg
     3661 gttgccccgg tcaaccatgg agccacagcc gaggtctcaa tgggccagca gctatcccga
     3721 ggggcgcatg caaccgcgta gtactcgacc taacgaccgc gtgtatccag cgaacggccg
     3781 tttgcggggc tatgctggtc ggcggcccgc aaaggacaat gcggttatcg taggtgtcgg
     3841 cgcggcagcc cgtccggaag ctcgcgggca aatccttaca gacaattcga gtaaaggcta
     3901 tgacggcatc gtggtggtcg tcggcagaaa atccggtgcg cgaagtcacc gcctgccgat
     3961 ttcggttatt cattcatcgg tacgcgaggc actgcaccgc gcgacggccg gctctttccc
     4021 tgttctgaaa cgggtcggca atttttttct caatcgcggc gacggcacgg acgaaagcat
     4081 ttcggttatt cattcgcccg tacgcgaggc agtccaccgc gcgacggccg tctgctcccc
     4141 tgttctcaaa cgcgttggcg atttctttct caatcccagc gacggcgcgg gcgagagtcg
     4201 ggccgacggc gctggtttga aagcctatat cctgcgttca ttcgaacgcg agcgcgtggc
     4261 tggtcgacgg gtgcttgccg cggcgttgat cgtggccgga ggctgggcga ccttcgtgcc
     4321 gctttcggga gcggtcgtta tttccggcac agtggtgacc gagtcgaaca tcaaaaacat
     4381 ccagcatccg agcggcggca tcatcgccag gatcgcggtg cgcgacggga tgcgcgtacg
     4441 ggaaggcgac ctgctcgcca agctggacga tacgcaggta cgtgcgaatt tccaagtggt
     4501 caccacacag cttgacgaga ttagagccag aattgcgagg ctcacggctg aacgcgatga
     4561 tcgcaccggg cgcgctttgc ttcgcccagt gaccttcaca aatcgcgagg acgatagaga
     4621 gcagctgctg acatcggaaa gctccctgct tagggccagg gccgacgccc gcaagagtca
     4681 aagggagctg ttgcgcaacc gaatcgacca gctgaaccaa gagatcagcg gtctcgacgc
     4741 gcaaatcaag tcgaaacgga cccagtccga actgatcggt cgagagctcg aaggtatcca
     4801 gtccctctac gacaagggcc tcacgacgtt gccgcgactg acatcactgc agcgcgaggc
     4861 cgcgcggctt gacggcgagc gcgggcaatt ggtttccacc atcgctgaga cacgcgctaa
     4921 gatcagtgaa tccgaactgc agctggtgaa gttagatcag gatttccgcg ccgacgtcat
     4981 gaaggacctt cgtgaggccc aggacaagga ggctgaattg gccgaacggg tggtggccgc
     5041 acgagatcaa ttggatcaca tcgatcttcg cgcaccaacg gcggggatcg ttcatcaact
     5101 ctccgttcac acgattggcg gcgtcgtaag gcccgccgag gtcatcatgg ttattgttcc
     5161 cgaatcggac gaattgcaga tcgacgcgcg acttccggcg aacgaaatcg atcaggtata
     5221 tagaggccaa cgcacgctgg ttcgcttttc cgcattcaac cagcgaacca cacccgaact
     5281 cagcggtgtc gtctcccatg tctctgcgga catcacccgc gacgcgcaat ccaacatcag
     5341 ctattatacg gtgcggatca gtttgccggg cgaagaactg gcacgcctga gcggactgca
     5401 gctcatttcc ggaatgccgg ccgaagtctt tgttcagacc gggagccgga ccatgatgag
     5461 ttaccttttc aagcccatca acgatcagct acaccgcatg ttccgcgaac ggtgagacat
     5521 ttgagacaac aggctgaagc ggaggtgagc ggcgcgtaac gtcatcggca gcggccggag
     5581 agcgtttcac gccgttgaac caatcgagcg cgcgcgacag cgcgtttccg ttggcatctt
     5641 gagggatgaa cggatcgcag tggcaggtgg cgccgacttc cgcggccatg cgactcacag
     5701 cctcgacaag ccgcggcggt ccgcatgcgt ggaccgtatc ttctagcgac agctccggaa
     5761 tgtgatcggg gacgtttccg gtgcgcagga cggtagtgag attctgcggc attttgacaa
     5821 ccggaatgat tgtcacgttc ggataacgcg ccagcttaca gagcgcattg gtcatataaa
     5881 gagattcgat ggtttgagca ccgaccacca aggcgatacg gcggcgccga tgctctcgga
     5941 tcgcagcgat cgcaatagaa aagatcggcg caaaccccgt tccgctggcg acgagcacta
     6001 atcggttgag ggacgctgga cgcagaaacg ccgagccaaa cggcccctgc atcctcaccc
     6061 gatgtcccac acggatgtcg ctaccgatgg cggcagatac ccggccacgg cgaatacgcc
     6121 gcacctgcaa atggagaaat tccctttcgg caaaattctc catcgaggcc gttggactgt
     6181 agcagcgcat cggataacca cgaaactgca cccgcagata ctgccctggt aaatacacga
     6241 ccggtcgcga cggctcgata tcgatctcga caacgtccgg cgcacgcttt ttgattgcgc
     6301 gcacttggcc ggtcgccatc tggacatccg gcaacgcctc aatttcaagc ttcaggtccg
     6361 agatgatccg actctggcat gcccgcaccg cacccggctc tccgcattct ccaccaattg
     6421 tcaatccctc gaggactcgc acctgacagg tgccgcaatg ccctgagcgg cagtcatgcg
     6481 gaatgtcgac tccgttccgg agcgccgcat cgagcaggac gtcgccgcag gcagcgaaca
     6541 acacctggtc atcgatcgtc acacggcaat tcttccgcat tattgttcca cctccagaaa
     6601 aataggcctc aggtgccgtg tgtgatggat ctgcgcgtga tcgaaagccg agagccgcat
     6661 acgggttccg gtcgcgattg gaaccgcgcc gcccttgagg cttcgactgg cctcaagcat
     6721 ccaccggccg gccgcccatc gggccacacc gcgcacttcg ccagcgtttt cgttcggcgg
     6781 atttcccacg atgagccctg gaataatggc acccacggga atctggttgt cgcgttcgcg
     6841 cgagtagggc tccgattcgg cctccgtcat ccaccatctt gcgccgtcac tctcgctgtg
     6901 attggggtca agatcgacac gcccgagtgc ctcccacgtc gccttccaat ttttcggcaa
     6961 gcggcgcggt tgaacagcct gacggtaccc gccaaggagc tgcggttcga agttcatcgc
     7021 gtaaactttc gccccacgcg ggtccgcaat gaatccgcca cgatatggac tgcgaccttc
     7081 agactgcgcg ggagtgggcg cgacgggcac cccgaagcgg tcctggtcga tccacccgta
     7141 ttgtccgctg ctcgaagcct tccattgcca cacctcaatc gatgcattgg ggtcacgggt
     7201 gtaatggagg cctcggccgg acaaggtcgc cggcttatcc gcaagcggtg ccggccccac
     7261 atgaaatgta cgatcccccg gcacaatggt gtcggcttgc gtcagcaaga cagcaagctt
     7321 atcctcgtga tactcatgcg catcggcaac gtcgtagcga tcttgaagaa cgtgccaacc
     7381 atcgttttcc ttgatcaacg gcaaatgctt gagtgaacgc gtgggatcgt cccaaacgaa
     7441 gcagaaataa acgcgttcgc cgtcgtgtac ggcacgcaca tcaatcttcg tttcgccttt
     7501 gccggcaaaa tttccgccaa acgccgtcca aaccgtgagc ggcttgacgg tcagccaaac
     7561 cgggtccgac gcatcgccgt cgaggatcgg caactctgtt gttgcaatct ttcgaatata
     7621 cagccgatct tgaatcgccc tatccgccgg tagcacaaat ccgacggtga ggagcgcggc
     7681 ggcgagcgcg accacgagtg gattggcctg aatggtcgtt cccgcacctc gtggccggtg
     7741 tcgacctctc gggtcatcat ccatttgtgg acgactggat tccggcggct tttggcccga
     7801 ccggttggcc ttcatctggt ccctttttgc atgagcgact tggctgttga gctccgccac
     7861 cttgctgttg agctccgcca ccaatgccat tggatcgaat ggcggtgggg ctgacgcaaa
     7921 tccactcgga cggaaaatgc gcacgagttg tagaaagccg ccaattgccc aatgcgtcgc
     7981 aatgtgcgcc ggcgcacaag caagaatgat ccatgtgccc aacagatgga tctgcaccac
     8041 gacgtaacta gcctgtccaa agtagagctg ggctccggtg acgaattcgg ccaccatcgc
     8101 ggcaaagaaa atccagcaaa gcaaaacgtt gatggcactc catcgcgctt gagctgtctt
     8161 gaacaatccg gccatgcgca cgaaatcgat ttgaatacga ctaaataatc gggcactcat
     8221 gatataggcg acataggcga cagcaagcgc acaaagaatg agtgccgccg gcaagtggcc
     8281 ggtccatacg acctgtttgg gcaacagacg atcgaaggcg agcagccaag catgctcggg
     8341 ttcgtcggct gcgattctca gtccagtagc gatcgacgtc accaacgtaa tgacgacgag
     8401 ccaatgaagc aaaatcgtgc cgatatccgt ccgcctccga acagcgagcc ggcgcatcca
     8461 gagttcccca cctcaacgct ttggcggcaa gtccccgggc cccgccgctg ccccgctgga
     8521 tcagttttgt ttgacgttcc gttgccccat caacggtcgg atgagatatc gcagcaatac
     8581 atgtgatgaa gctcttgcat atcccccacc acattttggc aaatttaagc tagttcactc
     8641 aaactgccgc ttaactatct atcatacatc aatgcggcga tttgctgatg tgaatgcatc
     8701 cgaacacgtg cttgacctgg gataaagatg ggcgggtcca tgcaatctct gtggtagcat
     8761 ccaaatgctg acgaaatgtt cgcatttcga tatgttaatc gcacctcgtc ccacaaccgc
     8821 tatcacaacc aaccacaact aacgccacct ccttacctct tctctttccc ggcatacggg
     8881 ttcgccttct ccctcaatgt tagccgtatc ggcacccctg gcagcgcgaa actttctcgc
     8941 aacgcgttaa cgaggtagcg ccgatagctg tccggcaccg catcggcgcg gctgcaaaac
     9001 agcacgaagc tcggcgggcg ggttttcggc tgggtgatgt agttgagctt gaggcggcgg
     9061 cccgacaccg cgggcggtgg gtgcgcggcc cgcacttcat cgagccagcg gttgagcgca
     9121 ttggtgacaa tgcgcttgtt ccacagcgcg tggatatcca gcactgcctt tatgaggtga
     9181 tcgagcccag cgccggtgag gcccgacacg gcggcaatcg gcacgcccct gacctgcgtc
     9241 agcaggcggt ccgcctgctg acgcagtttg gcgattgcgc ccggtgcggc ctcctggagg
     9301 tcccatttgt tgatgccgag caccagcgcg cggccttcgc gctcgatgag atcggcgatg
     9361 cgcaaatcct gctcctcgaa cgcaacggta gcgtcgatga gcaaaatcac cacctcggcg
     9421 aagcggatcg cttcgagcgc atcggcgacg gacagctttt cgagcttgcc ctcgactcgg
     9481 gagcggcgcc gcaggccggc ggtgtcgtga accaggaaat gccgtccgcg ccaagtgagc
     9541 ggcaccgcga tggagtctcg cgtgatgccg acttcaggac cggtgagcag gcgctcctcg
     9601 ccgagcaggc ggttgatcaa cgtcgatttg ccggcgttgg ggcgccccac cacggcgata
     9661 cggatcggtt ttttcggagc agcagattct tcctggtcgc cattctcctc aatgtcttca
     9721 cccggcatcc cgatttgcgt cggcacggcg gcgcgcagcg catcgtagag atccgcaaga
     9781 ccgtcgccgt gttcggccga gatcgccacc ggctcaccga gcccgagatc gaatgcttcg
     9841 taggcgccgg ccaagccctt gcgaccctcg gccttgtttg cgacgagaat cgtcggcgtg
     9901 ccgatgcggc gcagcacatt cgcaaacacg cggtcgtctg gcatgatgcc gacacgggca
     9961 tcaatcagga agaacaccgc atcggcacgc gcaatcgcgg tcacggtctg gacccgcatg
    10021 cgggcggaga ggctctcggg accggattct tccaagccgg ctgtgtcgat gatggtgaag
    10081 gtcaaatcgc cgagccgcgc tgcgccatca cgccaatcac gggtgacgcc tggggtatcc
    10141 tcgaccaacg caacacgccg gccgacaagg cgattgaaca gcgtcgattt cccgacatta
    10201 ggccggccga caatcgcaac ggtgaggctc atgaaggtgc aaccttcccc ctcgcccgct
    10261 tgcggggagg gaagcgctca gcgtgccacg gcgccgggag cacccggcca ggcggcctgt
    10321 ggctgcaccg ccggccaggg tgcggtagct tgcggagcag gctgcggggc tggttgcgag
    10381 gcgggcgcgc gcgttggcgc cgccgcatag ggatcggccg gggcctgcgg ctgcggagcc
    10441 ggcttactcg ccgtacgctg aggtgccggc ttggatttgg gcttcggctt cgcgaccggt
    10501 tcggctgcag cctgcgcggc ggccttggcg ggatcgggcg tgccgccttc gggctcgtga
    10561 tatcccttca ccagctcagg tggtacgccg gtcgcaactc ccggcacgcc ttcgggaaac
    10621 accggcttgc gctcgcctgc aagtttcttc ttgttgtcaa atatatcgaa cgtatcaagc
    10681 gactcgcagg cggaaaggat cggcaccgcg gcagccagga cggcggcaag agccaggcgt
    10741 gcaagaggtc gcatcggcgt ctcctaaggc ttgccggctt caggcaggag ggaggcgagc
    10801 acgtccatgc gagaccgcac gcccgacggc gcttccggat cgttcttggc cgcgaccgtc
    10861 catcgtcgca tggcggcggt gtcgtggttg cgccaggccg caagcgccag caattctcgc
    10921 gcggtgtgac ggaacacgcc cgaaggtccc gccaacggct cgagacgctg ggtcatttcg
    10981 tcgagttttg cggtgtcgac cagcaaaaac gcggcgcgaa ccgcagcaag ctcgctgatc
    11041 aacggctgcc cggtggtttc gcccgcgatc tggtcatagg ccgcgaccgc ggccttggga
    11101 tcccgctcag atatctcggc agcctcgcgc agcctcgcga gtaaccgata gccagccgtg
    11161 ccctcggtga cgagcttggc gaaggccgct tcggcttcgc catggttgcc ctcttcggcg
    11221 aggcgggcgg cagcatcata ggcggctccg gcctcggcgg cgcgacgggt ctgccaatag
    11281 tcatagccgc gccatgccgc gaccgcggcg accaccaaaa aggctgccgc cacggcatag
    11341 ttgccatagc gctcccacag cttcttgagc tgttcgcggc gtacttcctc atcgacctca
    11401 gtgaaaatat ccgacacgga gccactccgc ctgttggcgc attacccgaa tacactgcct
    11461 gtcccgcagg tgtgtccgcg gagcttgcag gccgaaaacg actccggcct gaatcacgcg
    11521 ccgacaccat agtttaaggc gcgcaaacag gcaaaatcgg atcatcgccg cggtggcctt
    11581 tatgataagg ttatggcgac ggcgtggcaa acgcgtgccg aagggaaaga ctgcgacctt
    11641 aggtctgctt accccctcct cccgggggcc gactccgtga cactgactcg ctgcacgcgc
    11701 ccctccttac cccagcgcaa gccggcggag tgaaaaactt gctgtgtcct cacaccttct
    11761 tcttcaccgc atacacgttg tctggccccg gaaacgtccg gttccttacc tcggccgcat
    11821 aggccgagac cgcggcctcg atcgccgggc cgaggctcgt gtaacgcttg acaaatttcg
    11881 gcacccacgg cgacaggccg agcatgtctt caagcaccaa gacttggccg tcgcaggcgg
    11941 ggctcgcccc gatgccgatg gtggggatgg cgatctcgcg ggtaatttgc gcggcaagcg
    12001 gttccgccag cgcctcgagt acgaccgaga atgcgccggc ctctgcaacc gcacgggcat
    12061 cggcctcgat cggcgcccaa tcagcccgat cgcgcccttg ggcgcgaaag ccaccgagcg
    12121 cattgacgga ttgcggcgtc agccccacgt ggcccatgac cgggacgccc cgctcggtga
    12181 ggaacctgat agtttccgcc atgcgctggc cgccttcaag cttgatggcg ccgcacccgg
    12241 tctccttaag gacgcgtgca gccgtcatga aggcctgctc ccgcgacact tcgtaggagc
    12301 cgaacggcag gtcgaccacg accagcgcgc gccgcgagcc gcgcattact gcgtggccct
    12361 gcaggatcat catgtcgagc gtcactggga tggtggtctc aagcccgtgc atcaccatgc
    12421 cgagcgaatc cccgaccaag atcacgtcgc agtgcgcatc gaggatgcgt gccgtatggg
    12481 cgtgatagga tgtcagcatc acgaccggcg cgccgccctt gcgggcacgg atatcgggtg
    12541 cggtaagacg cttttgcgtg gtctggccgg gtggtacgtg cgtcgacatg tcaggtcccg
    12601 aatgcggtgg cgccgaaaac atgccgcccg accaccagcg ggtggaacac caggccgagc
    12661 gcgagataaa ggatgacacc gacgaccacg gccgcgatgt cattgttgcg cccgccttgg
    12721 ggaatcagcg gcccgcccgg atcgctgcgg cgcttgagcg tgatgcggtc gtagaccgcc
    12781 caggccaaca ccagtccaaa caagatgatt ccaccgagat cgccattggc agcgaggtgt
    12841 gccactgccc aggtcttcac gccgaccagc atagggtgtt tcagcacgcg tttgatgttg
    12901 cccggaaggt aggctgcggc aacgaaaatg caagctggca acatcaaggc ctcggtgatg
    12961 tgcctcgtcc aggccggcgg agtccacagc acaatcggac cagcggcgtc gtacatccca
    13021 aagcccttgc cggtcacata gaggccgatg atcgagaccg cggcgaacgc gcccttatag
    13081 ggccactcgc cgagtcgctt catcgcggcg tcgcggtgcg gccgcatggt cacgaacacg
    13141 tgcgggccaa gaaacagaac caatccgaga acgagtacca aaaggcccat tgtggtatct
    13201 ccgccggggg ctgaaattgc gccgcgcagt agaggcgaag gcgggcgcgg aagcaagtcg
    13261 cgttctactc ccttccgtct tcagccaggg ggttctttgc acggcacggg cttacctgga
    13321 tcgccccgcc cggcgcttcg cgccaccatc cccgaagacg ggacggagaa gtacggcccc
    13381 gatcatgcct tcaaatcccg gatcaccgac cgccgtcgca tgagcgcacg gacacttggt
    13441 cgccgcagcg ttcctgtgct tctatgaggc gaatcgggca gctgggggac cgcatgagcg
    13501 acgtaatcgg taagctgaca tccgaacaag ccttgctaat tatcgaacgg ctgtgccgaa
    13561 aaggcggcga gattcgcgaa accatcgccg ccgaggcgat gagtctcttg gccgaattca
    13621 gcctggatga aacagccgac aaggtgttcg acgctctcga ctcggtcgac atacaggatt
    13681 gctgggatcg ggcgggcggt tcgcgcgacg gctatacatc acccgacgaa gcggcagtcg
    13741 acatcgttga ggaagagttg caaccgtttt ttgatcaagt cgaacgctat catgccctgg
    13801 atatgcctga gcaggaggcg gcctattgca tgggcgtgat tctcggaatc taccgttttg
    13861 aaaacgagtc caaatcggaa ttcaagcaat tggccgagga cattccggtt gaatgcgccg
    13921 gcaacctgct agaggagtgg caggagcgca acccggaacc cgccggcatc gaggcgatgg
    13981 acgcgtttat gcgcgaacgc tgtccgaagt gggctgaatg gctgaaggac caataggacg
    14041 agacaaagtc aagttggagg cagcaattta gagagcgctc cgatgagatc gaatagtctc
    14101 cctaccgtca tacccgcgct tgtcgacgct tgtcgcgggc atccacgtct ttcttgccgc
    14161 gctcgagcag gcaagaccaa gacgggacaa gcccggccat gactccggaa aggtggttca
    14221 atatggccgg atacccgctg caggaccgca gcaatatcaa aaatcttgct gcccctgcaa
    14281 ggaggcagca atcttctccg cgacagtcgg ca
//
LOCUS       DATILV010000206         2959 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4650573, whole genome shotgun sequence.
ACCESSION   DATILV010000206 DATILV010000000
VERSION     DATILV010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2959)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2959)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2959
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4650573"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..147)
                     /locus_tag="VLJ17_04685"
     CDS             complement(<1..147)
                     /locus_tag="VLJ17_04685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HSV22307.1"
                     /translation="MTELFAPEAIAALFQVVMIDLTLAGDNAIVVGMAAAGLPEQQRT
                     RASLF"
     gene            complement(152..499)
                     /locus_tag="VLJ17_04690"
     CDS             complement(152..499)
                     /locus_tag="VLJ17_04690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22308.1"
                     /translation="MAQRKMDSGFERKLVIEVPLRFQGLIRLIAVTAAPAFMLFLLIP
                     APLVLPVLSILSFVIACVAAMYALFINANRDAQGSTIWNIVYVFTFTWIVAGMISNPK
                     HVLDWFDNLPMVP"
     gene            complement(640..1254)
                     /locus_tag="VLJ17_04695"
     CDS             complement(640..1254)
                     /locus_tag="VLJ17_04695"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV22309.1"
                     /translation="MATPMVFLIDDHASVRDALGEMLGVLGYSVKAYESADAFLAAID
                     EGELGCIVADVRMPGTDGIGLVRELARRGIPMPVVLISGHADVPMAVAAIKSGAQDFI
                     EKPVDDRQLVAAINRALARSFEHLDLQRAQSALDARFARLTPRQIEIFDLVVDGFTSH
                     AIADKLNISVRTVDSYRAEVMEKMQAESVAGLVRQAIRLGRIAP"
     gene            complement(1257..>2959)
                     /locus_tag="VLJ17_04700"
     CDS             complement(1257..>2959)
                     /locus_tag="VLJ17_04700"
                     /inference="COORDINATES: protein motif:HMM:NF017081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV22310.1"
                     /translation="ELTAGAPERDMSAPVLQREWLQFRSSEHASKLAVAVLYLAAYII
                     LEWASFIHVHKGLPITPWDPGLGVAFALMIRGGPLGGLILFAGMVVAETIVLQNDVDW
                     PTDLGVAVITATSYASVAALLHRYFRIDADLTHLRDVLLLLAAGLAGAVLNTVLLSAF
                     LLAVGQFDITDVVQVARPLLIGDTIGIAVITPLLLRFRIRERLKTRRLRSLALESALY
                     LCLIGVALWLIIGSEEAHGFRLFYLLFVPVVIAAVRHGVDGACFSLAVTQFSLIGLLH
                     FSGYDAGEFTEFQTLLLVLTVTGLIVGVVISERRNSDQIALDARARLAERQAEAAQVA
                     RVNLVSGMASALAHEINQPMTAARALGRSAQHLLRTPGGDLSRADSNLTTMLTHIDHA
                     GDILRRVRNFIRRGHPHVSTINTRDMLEEAMTLAQAEASARHVRVDLDAPADLPDLHG
                     DRVQLEQIVLNLVHNAVDAIAAAGQSPGHVHVMARHHAAPARIEIGVLDNGPGIEDES
                     AGRLFDPLTTTKQDGLGLGLSICASIVEAHGGRVWLHSGKPGATEFRFSVPLDRSRER
                     "
BASE COUNT          630 a          901 c          876 g          552 t
ORIGIN      
        1 gaacaaactc gcccgtgtgc gctgttgctc cggcaatccg gccgcggcca taccgacgac
       61 gatggcgttg tcaccggcca gagtgaggtc aatcatcacg acctggaaaa gtgcggcaat
      121 ggcctcgggt gcaaataact ccgtcattgc ttcaggggac catcggaaga ttgtcgaacc
      181 agtcgagcac gtgcttggga ttgcttatca tcccggcgac gatccaggtg aaagtgaata
      241 cgtaaacgat attccagatc gttgagcctt gggcgtcacg gttggcgttt atgaagagcg
      301 cgtacatggc ggcaacgcat gcgatcacaa acgacaggat gctgagtacg ggcagcacca
      361 gcggcgcggg aatcaaaagg aagagcatga aagccggcgc cgcggtgacc gcgatcaggc
      421 gaatcaggcc ctggaaacga agcgggactt cgataacgag tttgcgttca aatccgctgt
      481 ccattttcct ttgagccatt gaaacgctcc tttgccggtg cgcgctggtt gcgcgccacg
      541 tcgcggaatg caggcttcgt cgagaaccgc ccgcgtcccg tcccgttcag gataggagcg
      601 ccgttcgata tgggcattcg tattgatcgg gtggtaattc tacggggcta ttcgcccgag
      661 ccggattgcc tgccgcacca gtccggcaac gctttcggcc tgcatcttct ccatgacctc
      721 agcgcgatag ctatcaaccg ttcgcacgct gatgttaagc ttgtccgcaa tggcgtggct
      781 ggtgaatccg tccaccacca gatcgaaaat ttcgatttgg cgcggcgtca accgggcaaa
      841 tcgagcgtcg agcgcgcttt gcgccctttg caaatccagg tgttcgaagc tccgggcaag
      901 cgcgcgattg atcgccgcaa ccagttgcct gtcgtcaacc ggcttttcga tgaagtcttg
      961 tgcccccgac ttgattgctg ccaccgccat tggcacatcg gcgtgacctg agatcagtac
     1021 cacaggcatt gggatgccac gtcgggccag ctcccgcacc agtcctatgc cgtccgtgcc
     1081 gggcatcctc acatcggcga cgatgcaacc cagttcccct tcgtcgatcg ccgccagaaa
     1141 cgcgtcggcc gactcataag ccttcaccga atatcccaaa acgccaagca tctcgcccag
     1201 ggcgtcgcga acagaggcat gatcgtcaat cagaaagacc atcggagtgg ccacggtcaa
     1261 cgctcccgcg atcgatcgag cggcaccgag aatcggaact ccgttgcgcc aggcttgccg
     1321 gaatgcagcc acacacgccc gccgtgcgct tccacgatgg aagcacaaat cgaaaggccg
     1381 agtcccaggc catcttgctt tgtcgttgtc agaggatcga acagacgacc tgccgattcg
     1441 tcctcgatgc caggtccatt atccagcacg ccaatctcga tgcgcgctgg cgcggcgtga
     1501 tggcgagcca tgacatgtac gtgaccaggc gattggcccg ccgccgcaat ggcatcgacg
     1561 gcgttgtgca caagattgag cacgatttgc tccaattgaa cccgatcacc atgcaaatct
     1621 ggcaagtcgg cgggcgcgtc gagatcgacg cgtacatgcc tggcggatgc ctccgcctgg
     1681 gccagagtca ttgcctcctc gagcatgtcc cgcgtgttga tcgtgctgac gtggggatgc
     1741 ccgcgacgaa tgaaattccg cacgcgccgc aggatgtcgc cggcgtggtc gatgtgcgtc
     1801 agcatggttg tcagattgct gtcggcccgg gacagatcgc cgcccggggt gcgcaaaaga
     1861 tgttgcgcgg atcgtccgag cgctcgcgcc gccgtcatgg gttggttgat ctcgtgggcg
     1921 agcgctgacg ccattccgct caccaggttg acgcgcgcga cttgcgccgc ttccgcctgt
     1981 cgttcagcaa gacgtgctcg ggcatcgaga gcaatctgat cggagttcct gcgttcgctg
     2041 atgacgacgc caacgatgag cccggtcacc gtcagcacca gcagcaaagt ctggaattcg
     2101 gtgaattcgc ccgcatcgta tccggagaag tgcaggagcc cgatgaggct gaactgggtt
     2161 acggcaaggc tgaagcaggc gccgtcgacg ccatggcgaa cggcggcgat cacaaccgga
     2221 acgaacagca ggtaaaacag cctgaatcca tgcgcctctt cgctgccgat aatcagccaa
     2281 agtgcgacgc cgatgaggca gaggtatagt gcactttcca gggccagcga acgcaggcga
     2341 cgtgttttca gccgctcccg aattctgaac cgcagcagga gcggcgttat cacggcaatg
     2401 ccgatcgtgt cgccgatcag cagcggacgc gcgacctgca cgacatcagt gatgtcgaat
     2461 tgtccgacgg cgagcaggaa cgcgctcaga agaaccgtat tgagcacggc tccggcaagc
     2521 ccggctgcga gcagcaaaag gacgtcacga agatgggtta gatccgcatc gatccgaaaa
     2581 tatcggtgca gcagtgcggc taccgatgcg tagctcgtcg ctgtaattac ggccaccccc
     2641 aagtcggtcg gccagtccac gtcgttttgc aggacgatcg tctctgcgac aaccattccc
     2701 gcaaacagga tcaatccgcc cagaggcccg ccacggatca tcagcgcgaa ggccactcca
     2761 agacctggat cccacggcgt aatcggcaag cccttgtgga cgtgaatgaa gctcgcccat
     2821 tcgagaatga tgtaggccgc cagatacagg acagcgacag ccaatttcga agcatgctcc
     2881 gatgaacgga actgcaacca ttccctttgc agcactgggg cggacatgtc tctctctggc
     2941 gcgccggctg tcaactcag
//
LOCUS       DATILV010000207         2926 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_49951, whole genome shotgun sequence.
ACCESSION   DATILV010000207 DATILV010000000
VERSION     DATILV010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2926)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2926)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2926
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49951"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..381)
                     /locus_tag="VLJ17_04705"
     CDS             complement(<1..381)
                     /locus_tag="VLJ17_04705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HSV22311.1"
                     /translation="MRVDAFTHFIPKKFFEAVERIPGAGTDIGKRMRGVPCVYDLDER
                     RRIVSLFPDYVQILSYPMPPLENFASGDLLNDLCRMINDGFADIVRQHADQFPGFVAQ
                     VSLAAPAAAVREAERAIHDLGACGV"
     gene            735..1268
                     /locus_tag="VLJ17_04710"
     CDS             735..1268
                     /locus_tag="VLJ17_04710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonopyruvate decarboxylase"
                     /protein_id="HSV22312.1"
                     /translation="MAEAQPRGEPAGWQDEVFDLLRRHQVTQFAYVPDAGHKILIDRS
                     LADPDVYSIPLTTEEEGVALLAGTDLGGGRGVLLMQSSGVGNCVNMLSLINSGRFPFL
                     TLVSMRGDFGEANAWQYPMGQATVSVLEAMGVMCLRADNPAEAIATVDAALTMVFRAG
                     RAVAVLFTQKLLGAKRF"
     gene            1281..1904
                     /locus_tag="VLJ17_04715"
     CDS             1281..1904
                     /locus_tag="VLJ17_04715"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSV22313.1"
                     /translation="MAPHRASRDLTAATAPSFVLDRREAIPALLGRHEDFLIVAGLSG
                     TSRDVAALTNNGTHAYILTGAMGAACMMGLGLALGRPDRRVLVVTGDGELLMNIGALA
                     TIAVMNPPNLSIVCVDNGHYGETGYQRSHTSLGTDLERMAAGAGIRLTRTIEQQADIA
                     AGARLIREGNATSFVLLRVKPTEPPRDQRLLDPTGGRIRFRASLLGG"
     gene            1910..2905
                     /locus_tag="VLJ17_04720"
     CDS             1910..2905
                     /locus_tag="VLJ17_04720"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020175438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HSV22314.1"
                     /translation="MKPRHGTALILGASGQDGAYLAELLVRRGLNVHGTSRDKEVSGY
                     TGLHGLGIYDRIALHSVVLSDFRSVVTVLNNVRPALIFNLAAQSSVGLSFEQPVETID
                     SIMHGTINVMEAMRFLALDAKFYNSASSECFGNTNKDCPADETTRFSPRSPYAVGKAA
                     SFWAAANYREAYGLFVCNGLMFNHESPLRPARYVTQKIVRGVVAIAAGRAHTLELGML
                     NCARDWGWAPEYVDAMARMLDRETPEDFVIATGETNTLEDFVAAAFAYVGRNWRDYVI
                     ANPALHRPIDILYSGGNPSKAARLLGWKAEKKMADIVGLLVEAEARRCSAKGVKR"
BASE COUNT          543 a          852 c          927 g          604 t
ORIGIN      
        1 cactccgcag gcgccgaggt cgtggatcgc ccgctcggcc tccctgacgg ctgcggcggg
       61 ggcagcgagc gatacttgcg cgacgaagcc cgggaactgg tcggcgtgtt gacgcacaat
      121 gtcagcgaaa ccgtcgttga tcatccggca caggtcgttg aggagatcgc cgctggcgaa
      181 gttctccagt ggcggcatcg ggtaggacaa aatctgcacg taatccggga acaaactgac
      241 gatccgacgg cgctcgtcga ggtcgtaaac gcacggcacg ccgcgcatgc gcttgccgat
      301 atccgtgccg gcgccgggaa ttctttccac cgcctcgaag aatttcttcg gaatgaaatg
      361 ggtgaacgcg tccacgcgca taggtcgttc ctccggcttg cgtgaagccg cgcgcagcgg
      421 ccaaggtgtt tgtgatgacg acgggcggac ttcagggccg gtaggggcac gcaacgcagg
      481 cggatgtcaa gggacgcctc acctcccccg tggggagtgg tcgacggcga gcgccagcga
      541 gtcgtcggat gtacctagtt ggaaacgcgg ccgcttcgac ctcctgatat caggattgag
      601 ctgtaggcta aacaccgccg acaccggctc ttccgcgagt cttaagaaca ggtgtagcct
      661 tgtccaagag ttggcgacgg cgcatatcac tcattcctta cggtgatcgc cccgacgatc
      721 aggagcggat aatgatggct gaagctcaac ctcgcgggga gccagccggc tggcaggacg
      781 aggtattcga tttgctgcgc cggcatcagg tcacgcagtt cgcctatgtg cccgatgccg
      841 ggcacaaaat cctgatcgat cgttcgcttg ccgatcccga cgtctattcg atcccgctga
      901 caacggaaga ggagggcgtg gctctgctcg cgggcactga tctcggtggt gggcgcgggg
      961 ttctgttgat gcagagcagc ggagtgggca attgcgtcaa catgctgtca ttgatcaaca
     1021 gtggccgctt tccatttctg acgctggtca gcatgcgcgg cgatttcggc gaggccaatg
     1081 cgtggcaata tcccatgggg caggccaccg tttcggtgct ggaagccatg ggcgtgatgt
     1141 gcctgcgggc cgataatccg gcggaggcca tagcgacggt cgatgccgcg ttgaccatgg
     1201 tgttccgagc cggtcgcgcc gtcgcggtgc tgtttacgca gaaactgctc ggcgccaaac
     1261 gcttttagag gaaggccatc atggctccgc accgtgcttc ccgtgacctg acggccgcta
     1321 ctgcgccaag ttttgtgctg gaccggcgtg aggccattcc ggcgctgctc ggtcggcatg
     1381 aagatttcct tatcgttgcc gggctttccg gaacatcgcg ggatgttgcg gcgctcacca
     1441 ataacggcac tcacgcctat attttgaccg gagcgatggg tgccgcttgc atgatggggc
     1501 tgggcctcgc cctgggccgc cccgaccgcc gtgtgcttgt ggtcacgggc gacggagagc
     1561 tgttgatgaa tatcggcgcg ctcgccacca ttgccgtcat gaatccaccc aatctttcga
     1621 tcgtgtgtgt cgacaacggc cattatggcg aaaccggcta tcagcgaagt cacaccagtc
     1681 tggggacaga ccttgagagg atggcggcgg gcgcgggcat ccggctcacc cgcacgattg
     1741 agcagcaagc cgacattgcc gccggcgcgc gtcttattcg tgaaggcaat gccacctcgt
     1801 ttgttctgtt gcgggtcaag ccgaccgagc cgccgcgcga ccaacgtctg ttggatccga
     1861 caggggggcg cattcgcttc cgtgcctcac tattgggtgg gtgataacta tgaaaccccg
     1921 gcacggcacc gcacttattc tgggagcgtc tggccaggac ggagcctatc tggcagaact
     1981 tttggttcgg cgcggcctca acgttcatgg aacatcgcgc gacaaagagg tttccggcta
     2041 tacgggactt cacggacttg gcatctatga ccgcatcgcg cttcattcag ttgtgctcag
     2101 cgacttccgc agcgtggtca cagtgctcaa caatgttcgg ccggcgctaa tcttcaatct
     2161 tgccgctcag tcttcggtcg gtctgtcgtt cgagcaaccg gtggagacca tcgacagcat
     2221 catgcatggc accatcaacg tcatggaggc catgcgattc ctcgcactgg acgcgaaatt
     2281 ttacaactcg gcttccagcg agtgctttgg caataccaat aaggactgcc cggccgacga
     2341 gaccacgaga ttctcgccgc gcagtcccta tgccgtgggc aaggcggcgt cattttgggc
     2401 ggcggcaaac tatcgtgagg cttacggcct gtttgtttgt aacgggctaa tgttcaatca
     2461 cgaatcgccg ctgcggccgg cccgatacgt cacgcaaaag attgtccgcg gagtcgtggc
     2521 gatcgcggcg ggccgtgccc acaccctcga actgggcatg ttgaattgcg cgcgcgattg
     2581 gggctgggcg ccggaatatg tcgatgctat ggcccgcatg ctcgatcgcg agacgccgga
     2641 ggattttgtc atcgcgactg gagagaccaa cacgcttgag gatttcgtcg cggctgcgtt
     2701 cgcttacgtc ggacgtaatt ggcgcgacta tgtcatcgcc aatccggcgc ttcatcgccc
     2761 gatcgatatc ctttattccg gcggcaaccc gtcgaaagct gcgcgtctcc tcggttggaa
     2821 agccgagaag aagatggccg atatcgtggg cctcctggtc gaggccgagg cgcgacgctg
     2881 ttctgcaaag ggggtaaaac ggtaattttt aatctgcgcg aatctt
//
LOCUS       DATILV010000208         1509 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3628802, whole genome shotgun sequence.
ACCESSION   DATILV010000208 DATILV010000000
VERSION     DATILV010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3628802"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..669)
                     /gene="yidC"
                     /locus_tag="VLJ17_04725"
     CDS             complement(<1..669)
                     /gene="yidC"
                     /locus_tag="VLJ17_04725"
                     /inference="COORDINATES: protein motif:HMM:TIGR03593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0051205 - protein insertion into membrane
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HSV22315.1"
                     /translation="MDENNRNFILAIVLSIGVLFAWQYFFVPKHPPQQQTAEQPQKPA
                     EPGPPQPRAEGETPSPAGTAVAPGGAQAVTETREQALASSQRVAIDSPGIKGSINLKG
                     GRIDDVVLKKYHETVDPSSPNVVLLSPAGSPHPYYVEHGWVAETGKDTTVPGPDTVWN
                     AESKGPLTVSTPVTLSYDNGKGLVFTRTIGIDDNFMFAVTDAVANAGSEPVTLYPYGL
                     VSRLG"
     gene            complement(751..1110)
                     /gene="rnpA"
                     /locus_tag="VLJ17_04730"
     CDS             complement(751..1110)
                     /gene="rnpA"
                     /locus_tag="VLJ17_04730"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HSV22316.1"
                     /translation="MTAIERLKTRAEFLHVREGSRFAAPSLVLQARARGEQGGALLGV
                     ARFGFTASKALGGAVMRNRARRRLKEAVRIVGPDHAIPGYDYVLIARAGTVQRRFTEI
                     TKDLERALTKVHQAPRP"
     gene            complement(1143..1277)
                     /gene="rpmH"
                     /locus_tag="VLJ17_04735"
     CDS             complement(1143..1277)
                     /gene="rpmH"
                     /locus_tag="VLJ17_04735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010659431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HSV22317.1"
                     /translation="MKRTYQPSRLVRKRRHGFRARMATTGGRKVLARRRAKGRKRLSA
                     "
BASE COUNT          235 a          472 c          523 g          279 t
ORIGIN      
        1 gccgagcctg gagacgaggc cgtaggggta aagcgtcacc ggctccgaac cggcgttggc
       61 caccgcgtcg gtcaccgcga acatgaaatt gtcgtcgatg ccgatggtac gggtgaagac
      121 gagccccttg ccgttgtcat agctgagcgt gaccggggtt gagacggtga gcgggccctt
      181 cgactctgcg ttccacaccg tgtcggggcc aggcaccgtc gtgtccttgc ccgtctcggc
      241 gacccagcca tgctccacat aatagggatg cggcgagccg gccggagaca gcagcaccac
      301 gttcgggctg ctcgggtcga cggtctcgtg gtacttcttg agcaccacgt cgtcgatgcg
      361 ccctcccttc agattgatcg agcccttgat gcccggggag tcgatggcga cccgttggct
      421 tgaggcaagc gcctgctcgc gggtttccgt gacggcttgg gcgccaccgg gcgcaactgc
      481 cgtgccggcc ggagacgggg tctcgccttc ggcgcgcggc tgcggggggc ctggctctgc
      541 cggcttctgc ggctgctctg ccgtctgctg ctgcggcgga tgcttgggca cgaagaaata
      601 ttgccacgcg aacagcacgc cgatggacaa gacgatggcg agtataaaat tgcggttgtt
      661 ttcgtccatg tcgctttcgc tgttggccgc gggctgcgcg gtcagagtgg caagggccta
      721 agggtcttgt ctgaaggctt tcagcgctgt ctagggcctc ggcgcctgat ggaccttggt
      781 cagcgcccgt tcaaggtcct tggtaatctc ggtgaagcgc cgttgtaccg tgccagcccg
      841 agcgatcaag acataatcgt agccgggaat ggcgtggtcc ggaccaacaa tccgcaccgc
      901 ctccttcagc cgccgccgcg cccggttgcg catgactgcc ccgcctaagg ccttgctcgc
      961 ggtgaagccg aagcgggcga cgccaagcag ggcgccgccc tgctcacccc gcgcgcgggc
     1021 ctgcagcacg agcgaaggcg cggcaaaacg cgatccttct cttacatgca gaaactcagc
     1081 gcgggtcttg aggcgttcga ttgccgtcac cgtggaggcg gggctcccgc gctagcggcc
     1141 gatcaagccg acaggcgctt tcgtcccttg gccctgcgcc gtgccagcac cttgcggccg
     1201 cctgtggtcg ccatgcgggc gcgaaagccg tggcgccgct tgcggacgag tcgcgatggt
     1261 tgataggtgc gtttcacgcc aaatctccga tggatgcagg gtttggcggc ttataggtgg
     1321 caggaacggc caagtcaatc cgcgggcatg acggttgcga ggctgcatcc ctccccaaaa
     1381 cggaggaggg atgcggcagg cgtgaaatca ctcaggctgg tctgatgggg gcggggcatc
     1441 gtcgccgcta tcaccgccgc tattgtcgtc aggcgcggta gcggtgtcat cctccggcgg
     1501 aggggccgc
//
LOCUS       DATILV010000209         3590 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4905162, whole genome shotgun sequence.
ACCESSION   DATILV010000209 DATILV010000000
VERSION     DATILV010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3590)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3590)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3590
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4905162"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..516
                     /locus_tag="VLJ17_04740"
     CDS             <1..516
                     /locus_tag="VLJ17_04740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22318.1"
                     /translation="CRDTDDRRDDGRCNYITGAEAQLERALTDPTHTARSGLRACGAV
                     RAATQCRRRETKMRKQMTSRTGEITPKRIDQEYPRQIEISIPSGGLGTRLNDHHEFCR
                     SRRLRYATRGIGKVRRIEERDAVRYCFKNACDAYAFQAAFGGERRVAPAAEKSPAPSI
                     GRGGLWSKRRT"
     gene            complement(1328..1714)
                     /locus_tag="VLJ17_04745"
     CDS             complement(1328..1714)
                     /locus_tag="VLJ17_04745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018045411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HSV22319.1"
                     /translation="MTDTLARNKRNVTAFYDLMFNQGRPGEAVEQYVGTEYIQHNPRV
                     ADGKQAFIDYFEDAAREYPNKRVEFMRVIAEGNYVVLHCRQEWPGNATWAGVDIFRLD
                     EKGRIVEHWDVLQIVPDKSANSNTMF"
BASE COUNT          749 a         1091 c         1064 g          686 t
ORIGIN      
        1 tgccgcgata ctgatgaccg ccgcgacgac ggccggtgca actacatcac cggcgccgag
       61 gcacagcttg agcgcgcgtt gacagatccg acacacacag ctcgatcagg tttgcgggcc
      121 tgcggcgccg tgcgtgcagc gacccagtgc aggcgtcgag aaacgaagat gcgcaaacaa
      181 atgacctccc gcacaggcga aataacaccg aaacggatcg atcaggagta tccgcgtcag
      241 atcgagattt cgattccgtc cggtggcctc ggtaccaggc tgaatgacca tcacgaattt
      301 tgccgatcgc ggcgactccg atacgcaacg cgcggcatcg gcaaggtgag gcgcatcgaa
      361 gagcgcgacg ccgtgcgcta ctgcttcaag aatgcttgcg atgcttatgc gttccaggcg
      421 gcattcggcg gcgagcggcg cgtggcacca gctgccgaga aatcaccggc tccctcgatc
      481 ggacgcggcg ggctttggag caaacggcgg acctaagaat ttgtgtgcga cgcaagagca
      541 ttttctggaa aggtgggtac cgcagaaaac gcgaccaact ggaacacttt tcgccgatca
      601 cgctgcgagt tgatggtcaa cgtaaacgat aagtgtggct aaccgggtgc gcgtcgtcgg
      661 ctatgcggcc gatcacgatg ggcgcaatga aggtggccaa aaataaagga ccgcaggggg
      721 aaaccagggg aatgccggcg gccaatcaag ggacaacggc tccgtgggcg tgccgccatc
      781 caatgaacca atgaccaaaa caggtggcag gatcggcgcg atcccgggtt gtttccgtaa
      841 cgcgtcggta acccgcgccc gacagcgcca cgagcccgcg cctcccacgc agttccaatg
      901 gcggttggtc ccttagccaa caatagagag ggcaaacaga agcaaggagc cgaaaatgcc
      961 aacgcatggc cgtacgcgga cccccaaagg gtaccctgga ggggggccat cccaactcca
     1021 gggcccggcg gtttacccag gtgcgcacaa gcatgacccg gaggccgcca aagccacata
     1081 acgttgttgc ggagagagat cgcaattcac tttgacatac ctgtagcggc tacaggtatg
     1141 tcgtgccgcg gggtctgctc gtcggcctcg agcccgctgg tatcatcaag ttcgcactcg
     1201 gggcgttcgc gatctggtcg gcatcgaagg tctttgccga tcatcgccaa actcgcgggt
     1261 catgtttgaa atccgcatga cgtgggcggc gttgccgatc acatctcgcc tttggtctcg
     1321 gggcatctca gaacatcgtg ttagagttgg ccgacttgtc agggacgatc tgtaacacat
     1381 cccagtgctc aacgatcctg cccttctcat ccagacggaa aatgtcgacg ccagcccatg
     1441 tggcgttgcc cggccattcc tgccgacagt gaaggaccac gtagttgccc tcggcgataa
     1501 cccgcatgaa ctcgacccgc ttgttcgggt actcgcgcgc cgcgtcctcg aaatagtcga
     1561 tgaaggcttg tttgccatcc gcgaccctcg ggttgtgctg gatgtattcg gtcccaacgt
     1621 actgctcgac cgcctcgccc gggcggccct ggttgaacat caggtcatag aatgcggtga
     1681 cgttgcgttt gttgcgggcc aaggtgtcgg tcatgggatc atgagcgacc caaatggcct
     1741 gagctgtcaa cgttgcttta aactgaggcc cgaccggcgg ggggcggtgt aggagaaggg
     1801 aagggtggtg tctcagggtc actaccatcg ttatgccaaa tcatcatcga gactctttgt
     1861 tgaagctgat ttttccccga ggggtccagg atagtgtgat aggagatggt ggtttcgctc
     1921 ttaataatct cgcattctga agattctctg cgccaaatat tgagttgtcg cgtcaccgct
     1981 ccgccgccta agccatcgcg cgtccaccgg agtcggtggg tctaagcgat gcgagagagc
     2041 gatcaccgtc tgttgggtga gcaattttat acagattccc ggtcgaggac gagcgtagac
     2101 tttggcagct cgagcgccga cgcaaggcgc cgagccatca tctggaatcc aattttgagt
     2161 tccttcgctc cgaagccacg ggaggccaca catgcatgct ccaactcacg atccaccatc
     2221 gatcgaacgc tgtcagatct gctgtcgaaa gctagttctc gatacgatcg cgccgcatgt
     2281 cctacgcggc tgcgagattc aaaccttccg gtgctcgcag tgcggctcgg tcaaatccaa
     2341 aattgtttcg acccgaccac cgctgggcga cgcggcactc caagcgcttt gaaagggtcg
     2401 cggcggatgt gcgcctgggc gacgagctga ccaagcagcc gaaggcgaag ggcacgcttc
     2461 gccgcggggg cccacaatgg caatgttggc tggcgcctga ttcatcaaac ccgcgatgcc
     2521 ggcgacaatc tgtcctaatc atggctcttg tgcttctcgt gttccgcccc cacgtacaac
     2581 ggcagtggtc cgccagtaat ctagttccag gcacacacga agccgcctcg accccttgtg
     2641 gtcgaacagg catagagcct tggtcgtaag cacggaccag ctcatctccc gccctcatca
     2701 cttacgcgct gatctcggat gtcggtggcc gggcttcgac gatgccgtca tcgaagtcag
     2761 cagcacaatt gaatgcggcc aggactctcc tcgccggctt cgttgcacga tcgcgacgcg
     2821 ccgctgccgg gcatcgcgaa gcttcgcgac atctgattgc gccttctcgc cgacgtcatc
     2881 gcccatgacg cccacgcact cacgcacgca gtcgaacatg catcatgata gtaccgtggg
     2941 agcttttatc cactgccgtc ctgacccttg ccggagtgct caattttgaa cagcctccac
     3001 gtcgcaatca gtgcacgctt gtgcaggcag ctcgaagccg cccgcgcaag gcgccgagca
     3061 tccacctgaa tcctattttg atttccttcg ctccgaagcc acgggaggcc acacatgcat
     3121 gctccgacga acgatccacc atcgatcgac gcgtgtccga tttgcgcgcg accattggcg
     3181 ctggagacaa tcgagccaca ccgcttcctt cacggctgcg acgttcaccg gtaccggtgt
     3241 cccgagtgcg ggcccatgag attgaagatt gtttcgagga agacggctcc gcagcacgcg
     3301 acggcatagg ccaacacagc ggacgtcgcg cctatcgatt gctgatcgct ggttgggagt
     3361 tcagtgggaa gtgggctttg aacgaatttt ccggacgttg ccggccgggt cggcgcatga
     3421 gggggcgacg caatgagcga atccaggcac cgacacttcc acaagtagcc ctttccacca
     3481 gccgatcagc gaggcgagcc gcgcggtaga gcgttctgcg gcggcgaatt ctgaccatcc
     3541 gcaaaatatc cgcccggcgc cgacgcaacc agcgcagccg cgccaatcgc
//
LOCUS       DATILV010000210        13527 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1840758, whole genome shotgun sequence.
ACCESSION   DATILV010000210 DATILV010000000
VERSION     DATILV010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 13527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13527
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1840758"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..379)
                     /locus_tag="VLJ17_04750"
     CDS             complement(<1..379)
                     /locus_tag="VLJ17_04750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22320.1"
                     /translation="MAALKLHLFHVLDRVFFREFGFEANIDINLVRPAQCPAVTFVSS
                     TRDLSAATPRRYIAIDIDESKLKTDGVLMGSIAGIGGGNFYLLLVADDGNVRNLTRPL
                     KSNGTASSFEADLPPSKNGSLAPQ"
     gene            complement(413..1429)
                     /locus_tag="VLJ17_04755"
     CDS             complement(413..1429)
                     /locus_tag="VLJ17_04755"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSV22321.1"
                     /translation="MGEIYRGHAIENGELVAIKVMRSDLADDETALALFRKEAKALHA
                     LHHEAIVRYFVFSNDPGIRRHYLAMEFVHGERLSHIVQRRRLDFDQVRQLQQRLAAAL
                     HEAHRSGIIHRDVSPDNVLVPDGDVGRAKIIDFGIARSTRRDDTTVIGGGFAGKYNYV
                     SPEQVGLFGGEVTAQSDIYSLGLVCAECLLGQPIDMRGSEFEVVEKRRVVPDLQPVDA
                     RFRPLLARMLQRDPKDRPISMAAIAAWQPVGEAASESLPAGPGEERNGARTLRTFKDT
                     QSKSARRATLIFLTSLLLLAGGAVFYLMSGWSFGLFRRPIQPRELCISSKPMTAAIAF
                     GSIQ"
     gene            1428..2165
                     /locus_tag="VLJ17_04760"
     CDS             1428..2165
                     /locus_tag="VLJ17_04760"
                     /EC_number="3.1.1.106"
                     /inference="COORDINATES: protein motif:HMM:NF001664.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetyl-ADP-ribose deacetylase"
                     /protein_id="HSV22322.1"
                     /translation="MPPAPKCWSISKMALSRVPGERRTPGWASGRSAGICITLNRQHH
                     SFIERTPFDPTESGGSFCCPLDVEKGGHAMNARMIIVLGDIARQQVDAIVNAANTGLW
                     PGAGVCGAIHDAAGPELEQACAALKGCQTGDAKITPGFRLPARWVIHAVGPVWQGGEL
                     QEDALLASCYRKSLELAERHDIQTIAFPAISTGIYGFPLKRATDIAVSETKRFLEGHT
                     VPEKVTFVCFSKHDQQVYLDSVQRLIG"
     gene            complement(2194..2583)
                     /locus_tag="VLJ17_04765"
     CDS             complement(2194..2583)
                     /locus_tag="VLJ17_04765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020176495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SgcJ/EcaC family oxidoreductase"
                     /protein_id="HSV22323.1"
                     /translation="MNEATDDDRAIRELVRTWMSASKAGDLSTVLDLIADDAIFMVPG
                     RAPFGKDAFAAASQGQSNVQFEGTSDIQEIQILGKWAFLRNHITLTISTPDGQSNRRS
                     GYTLTILHKQPSGRWVLVRDANLMTSA"
     gene            complement(2686..3459)
                     /locus_tag="VLJ17_04770"
     CDS             complement(2686..3459)
                     /locus_tag="VLJ17_04770"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003951 - NAD+ kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006741 - NADP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019674 - NAD metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD kinase"
                     /protein_id="HSV22324.1"
                     /translation="MSQRRNRIAFVTSAIPEAEMARDTLTRRYGDVPPADADVIVALG
                     GDGLMLQTLHKFMEAGKPIYGMNRGTVGFMMNEYREDALKDRLAAAEESVIHPLVMHA
                     VDVDGKVHTARAVNEVSLFRQIYLVARLRILVDGKERLAQLDGDGVMVATPAGSTAYN
                     LSAQGPIIPIGAALLALTPINPFRPRRWRGALLPDAAVVTIEVLDPDKRPVAAVADHH
                     EVRFVRTVDIGMEHKIAMRMLFDPGHNLDERILREQFGV"
     gene            3505..3837
                     /gene="cutA"
                     /locus_tag="VLJ17_04775"
     CDS             3505..3837
                     /gene="cutA"
                     /locus_tag="VLJ17_04775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010038 - response to metal ion [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="divalent-cation tolerance protein CutA"
                     /protein_id="HSV22325.1"
                     /translation="MERAVFVYTTFPSVVEAEKAGNTLVEARLAACVNILPGMISVYR
                     WQGAVERAEEAVMIVKTRASLAEAVRASVKATHPYDTPAIVVLPVESVDERYFAWILA
                     ATTPVESA"
     gene            4163..4576
                     /locus_tag="VLJ17_04780"
     CDS             4163..4576
                     /locus_tag="VLJ17_04780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22326.1"
                     /translation="MFRNIAAALVAASVIAAPVLAQEAVSGANKGSPAVPAPAATVKD
                     SKIAPVPATTVKDSKIAPAPATTVKTVKADKAVTKHRKVAHHHRHGTKMVKQVNHGKY
                     AHHMKHSGTTAKQVSNKPDPVNQVSTKPATKSGVN"
     gene            complement(4677..5345)
                     /locus_tag="VLJ17_04785"
     CDS             complement(4677..5345)
                     /locus_tag="VLJ17_04785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008837282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HSV22327.1"
                     /translation="MSTSHPKLALFAQFAAVAKSLAHAHRLELLEQLAQGERNVEVLA
                     DRTCLSIANASQHLQQMRRAGMVTARREGKFVYYGLADDTILDLLAAIRRIAERNVAE
                     VDRLVRSYFTDRDALEPVSREELLQRSRAGTVTVLDVRPADEFALGHLPGAVNIPLRA
                     LEARLSELEPSLEIVAYCRSPYCVLSYEAVAALRSRGFTARRLEDGLPEWRAAGLPIV
                     IGTA"
     gene            5438..6268
                     /locus_tag="VLJ17_04790"
     CDS             5438..6268
                     /locus_tag="VLJ17_04790"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sterol desaturase family protein"
                     /protein_id="HSV22328.1"
                     /translation="MRNAMLAYEPHIRLTAFAGVFVVMATWEFIGPRREQTVGRGWRW
                     PNNLGVVVVDALLVRIIFPTTAVALALFAEARGLGLFNVVALPTWFGLVASVILLDLA
                     IYFQHVLFHAVPVLWRLHRMHHADLEIDVTTGLRFHPIEILLSMVIKLTVVVAVGAPA
                     VAVLIFEVILNATSMFNHSNVRMRDGFDRVLRWLVVTPDMHRIHHSILSCETNSNFGF
                     NLPWWDRLFGTYRAQPAADHEHMTIGIDQFRDPRELGLDRMLLQPFRGDAGGYPLGNR
                     "
     gene            6415..6870
                     /locus_tag="VLJ17_04795"
     CDS             6415..6870
                     /locus_tag="VLJ17_04795"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HSV22329.1"
                     /translation="MMAFVLGVVFALAGALFGPLWGSLWNLTDATFGATLALLIPRYV
                     ARDWIARRSGGPLKAADARRRSRGPALHRLCAARPYFPFNLSNDALGLTGSPLHHYVI
                     ATFVCMAPSVVAYGGSGMTDAERLAAKRMRCATACLHLVYSQPLGCCRD"
     gene            6942..8066
                     /locus_tag="VLJ17_04800"
     CDS             6942..8066
                     /locus_tag="VLJ17_04800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009337774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase family protein"
                     /protein_id="HSV22330.1"
                     /translation="MRIYLDHNASTPIDPAVALAMQPLLADHFGNPSSGHWAATTAKT
                     ALETARRQVAALLGCQSDEVVFTSGGSEANNLALKGVFFVLRHKGDHIITTGVEHPAI
                     IEPCRFLERTGARLTYLPVDGTGRIDPRDLHKAITPGTILISIMHANNEVGTIQPIAD
                     CARIAHAHGVLLHTDAAQSIGKVPTDVNELGVDLLSLAGHKLYAPKGIGALFVRRGVL
                     LEPLIHGAGHESGRRAGTESPLLAAGLGEACVRARDLAKMDRVRILRDSFWQMLRVQF
                     GDRVVLNGHPTHRLPNTLNISFVGQSGAQILGRLEDVAASTGSACHSGRIELSPVLAA
                     MGIAPEVGMGAVRFSLGRETTRSEIDAVVERLVNVLATAE"
     gene            complement(8192..11593)
                     /locus_tag="VLJ17_04805"
     CDS             complement(8192..11593)
                     /locus_tag="VLJ17_04805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020093717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-[ACP]--phospholipid O-acyltransferase"
                     /protein_id="HSV22331.1"
                     /translation="MSSSLLATRRFAPLFWCQFFSAFNDNFLKNALAFLILFKWAGPN
                     SEKLIALSGAIFIFPFFILSAIGGEVADRFDKAVVARRLKLVEIAVAGIAIAGFWFDS
                     PELLFVALFLIGIIAALFGPIKYGILPDHLAEAELPRGNALIEGATFVAILTGTIVAG
                     FASKDGGNPASFAGLMMGFALACWISALFIPRTGEAAPNLAIDFNIARSTWTLLRELY
                     RESHLWWGGMVVSWFWLVGIVVMTLLPPLVKNALGGNEEVVNAYLAVFSIAVAVGSGF
                     AAWLASGRIVLIPTVFGAVLLAVFAIDLGWLTSGMVAVHQGSGIVEVFRAGPGAHVAV
                     DLAGLAIGGGLFIVPSFAAVQAWAGADRRARVVAAVNVLNALFMTVASLSLIALKAQG
                     ISTSTILIGLGVLNVVAAIVILRTMPASPVRDLLSMIFRTFFRLEVTGVENVAKAGPN
                     AIIALNHVSFLDAAVALSLLEREPVFAIDSGIAQRWWVKPFLKLTRALPIDPTKPLAT
                     RTLINAVKAGAPLIIFPEGRITVTGSLMKVYDGTAMIADKSEALLVPVRIRGLEKTYF
                     TYLASSQVRRRLVPKVTVTILEPVRLSVDPALRGKKRRMAAGAMLYTIMSDLIYRTTS
                     TDRTIVEAVIEAAADNGRNRVAVEDPVSGSLTYKRLLVGVAVLGRKLMRLGETGDAIG
                     VMLPNANGAVVTILAAMSAGRVPAMINFTAGLMNIRSGCSAAKIEHIVTSRVFVEKAH
                     LEKIVDALAPDFSITFLEDIRGDINFGDKLRGLLAAKRSLVKRSADDPAAILFTSGSE
                     GTPKGVVLSHRNILTNAAQAQARIDFGRTDKVFNILPMFHSFGLTVGLILPLVSGVRI
                     YLYPSPLHYRIVPEMIYGVNATIMFGTDTFLAGYARSAHAYDFRSLRYIMAGAEPVKE
                     TTRRTYMEKFGHRILEGYGVTETAPVLALNTPMFNKFGTVGRLLPGMEARLEPVPGVE
                     EGGRLFVRGPNVMLGYMRAENPGMIERPPDGWHDTGDIVTIDPEGFIAIRGRAKRFAK
                     IGGEMISLAAVEALAAELWPDAMSGAATVPDARKGERLVLVTTKTDPKRSDLLAFARA
                     RGASEMMVPTEVLILEKLPLLGSGKIDNIALTNFVRERAKLEGAA"
     gene            11838..12167
                     /locus_tag="VLJ17_04810"
     CDS             11838..12167
                     /locus_tag="VLJ17_04810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22332.1"
                     /translation="MAALNGEFHGRQALTDTPGRDLREHVLPAFDMSVTGATKALGVS
                     RQQVHRVMSEKAPTTPEMALHLGKVLRQWALIRGCECKVLMICGVRGINFNESFIAYQ
                     KVATKAA"
     gene            12420..12725
                     /locus_tag="VLJ17_04815"
     CDS             12420..12725
                     /locus_tag="VLJ17_04815"
                     /inference="COORDINATES: protein motif:HMM:NF025178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-heme iron oxygenase ferredoxin subunit"
                     /protein_id="HSV22333.1"
                     /translation="MAWTRAAAVADVKERGVMDVDVGGEEIALYWVDDAVYATHNVCT
                     HAFARLSEGFLDGDCIECPIHQALFNVKTGEAVGPPAYTAVKTYPCRIEGNDVLVDI"
     gene            complement(13272..>13527)
                     /locus_tag="VLJ17_04820"
     CDS             complement(13272..>13527)
                     /locus_tag="VLJ17_04820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019171181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HpcH/HpaI aldolase/citrate lyase family protein"
                     /protein_id="HSV22334.1"
                     /translation="RECEDACRDGFIGKMAIHPRQVATINDAFTPKPAAIAKAQAIVA
                     AFAAAPDAGVIGIDGVMYDRPHIAKAERLLTRAKAAGVLP"
BASE COUNT         2639 a         4011 c         4192 g         2685 t
ORIGIN      
        1 gttgtggcgc gagcgatccg ttcttggacg gaggcaagtc ggcctcgaac gaactcgcgg
       61 tgccgttcga cttgagcggt ctggtcaggt tgcgaacgtt tccgtcgtcg gcgacaagca
      121 ggagatagaa gttgccgccg ccgatgcccg cgatcgagcc catcaagacg ccgtcggtct
      181 tcagcttgct ttcgtcgatg tcgatagcga tatagcggcg tggcgttgca gcggacagat
      241 cgcgtgtgct tgagacaaac gttaccgcag ggcactgggc cggcctaacc aagtttatgt
      301 cgatattggc ctcaaagccg aattcgcgaa agaatacgcg atctagcacg tgaaataaat
      361 ggagcttgag cgctgccaag gccgtaaagc ttcgtctgtt gttccgtgac ggttactgga
      421 tggacccaaa agcaatcgcc gccgtcatag gcttcgatga aatgcacaat tcgcgcggct
      481 ggatcgggcg gcgaaacaac ccgaacgacc agcccgacat caggtaaaag acggctccgc
      541 cggcgagcaa caacaacgac gtcaagaaga tcagcgtggc gcggcgcgcc gacttcgatt
      601 gtgtgtcttt gaaagtccgc agagtacgcg cgccattcct ttcttcgccg gggcctgccg
      661 ggagtgactc agacgccgct tccccgaccg gttgccacgc cgcaatcgcc gccatggaga
      721 tcggccgatc tttcgggtct cgttgcagca tgcgggccaa cagaggtcgg aaacgtgcgt
      781 ctacgggctg gaggtcgggg accacgcggc gcttctcgac gacctcgaat tcgctgccgc
      841 gcatatcgat gggctggccc aacaagcatt cagcacacac aaggccgagg ctgtagatgt
      901 cagattgcgc cgtgacctcg ccgccgaaca ggccgacctg ctccggcgac acgtagttgt
      961 acttaccggc aaacccgccg ccgatgacgg tggtgtcgtc gcgtcgggtc gagcgcgcga
     1021 tgccgaaatc gatgattttg gcgcggccaa catcgccgtc cgggacaagg acgttgtcgg
     1081 gcgaaacgtc gcgatggatg atgccgctcc ggtgtgcctc atgaagcgca gcggctagtc
     1141 gctgctgcaa ttgccgcacc tgatcgaagt caagtcggcg gcgttggacg atatgcgaca
     1201 accgctcacc gtgaacaaat tccatggcga gatagtgccg cctgatccca ggatcgttgg
     1261 aaaacacgaa ataccggacg atcgcctcat ggtggagggc gtgcagcgcc ttggcttcct
     1321 tccggaacag ggcaagcgcc gtttcatcat cggcgaggtc gctgcgcatc actttgattg
     1381 cgaccagctc gccgttctcg atggcatggc ctctgtagat ttctcccatg ccgccggcgc
     1441 ccaagtgctg gtcgatctca aaaatggcat tgagccgcgt ccctggggag aggcggacac
     1501 cgggttgggc gtcagggcga tcagccggta tctgcattac tctcaaccgt cagcatcatt
     1561 cgtttattga acggacacca ttcgatccca cagaaagcgg cggcagtttt tgctgcccgc
     1621 ttgatgttga aaaaggaggg catgcgatga acgcgagaat gatcatagtg ctgggcgaca
     1681 ttgcgcggca acaggttgat gccatcgtca atgcggccaa taccggcttg tggccgggag
     1741 ccggtgtatg cggggcaatt cacgatgcgg cggggccgga attggagcag gcgtgcgccg
     1801 cactgaaggg ctgccaaacc ggcgatgcaa agattacgcc cggcttcagg cttccggccc
     1861 gttgggtgat tcatgccgtt ggtcccgtct ggcagggtgg cgagcttcag gaggatgcgt
     1921 tgctggcgag ttgctatcga aagagcctgg aactcgccga gcgacacgac attcagacta
     1981 tcgcgtttcc ggcgatcagc actggcatct acggctttcc gctcaaacgc gccaccgata
     2041 tcgcggtgtc agaaaccaag cgctttctgg aggggcacac ggtgcctgaa aaagtgacct
     2101 ttgtgtgttt cagcaagcat gatcagcaag tttatctgga cagtgtgcag cgcttgattg
     2161 gttaacgcct catccggcgc cggaagtgga gcgtcacgcg gatgtcatca gattagcgtc
     2221 gcggacgagc acccacctcc ctgacggctg tttgtgcagg atcgtcagag tgtaaccgga
     2281 acgccggttc gattgtccgt cgggcgtgct gatcgtcaac gtgatatggt ttcgcaagaa
     2341 cgcccactta ccgaggattt ggatctcctg gatgtcgctc gtgccttcaa actggacatt
     2401 cgactgacct tgggacgccg ccgcaaatgc atctttgccg aacggtgcgc ggcccggaac
     2461 catgaaaatt gcatcgtccg cgatcaggtc cagtaccgtg gaaaggtcgc cggctttgct
     2521 ggcgctcatc caagtacgga ccaattcgcg aattgcacga tcgtcatccg tcgcttcatt
     2581 catccggttg cctctcgttt tcttaaaatc cgacctgcgg gatcggcagc gcagttcacc
     2641 gccgttgttt gactggtcgg gggcgcagca gccgttcagc ccgcatcaca ccccaaactg
     2701 ctcacgcaat atccgctcgt cgagattatg gcccgggtcg aacaacatgc gcatggcgat
     2761 tttgtgctcc atgccaatgt cgaccgtgcg tacgaaacgg acctcgtgat gatcggcgac
     2821 ggcggcgact gggcgcttgt cggggtccag cacctcgatg gtgacgacgg cggcgtccgg
     2881 caacagggcg ccgcgccagc gccgcggccg gaacgggttg attggcgtga gcgccagaag
     2941 cgccgccccg atcgggatga tcggcccttg ggccgagaga ttgtaggcgg tcgagccagc
     3001 cggcgtcgcc accatgacgc catcgccatc gagttgagcg aggcgttcct tgccgtccac
     3061 caagatgcgc agacgcgcca ccaggtaaat ctggcggaac agcgatactt cgttgacggc
     3121 gcgcgccgtg tggaccttgc cgtcgacatc gacggcgtgc atgacgagcg gatgaatcac
     3181 gctttcctcg gcggcagcca ggcgatcctt gagagcatct tcgcggtatt cgttcatcat
     3241 gaagccgacg gtgccgcggt tcatgccgta gatcggcttg ccggcctcca tgaatttgtg
     3301 cagggtctgc agcatcaggc cgtcgccgcc gagcgccacg atgacgtcgg cgtcggcggg
     3361 ggggacgtcg ccataacggc gcgtgagcgt gtcgcgcgcc atttcagcct ctggtatggc
     3421 gctcgtgacg aacgcaatgc ggttgcggcg ttggctcatg ggtgccggct ctttcgttga
     3481 aaacggcttt ggagggctcg cggcatggaa cgcgcggtgt tcgtgtacac aacctttcct
     3541 tcggttgtcg aggctgagaa ggctggcaat accttggtgg aggcgcgcct agcggcctgt
     3601 gtcaacatcc tgcccggcat gatttcggtc taccggtggc aaggtgcggt cgagcgcgcc
     3661 gaggaagccg tgatgatcgt caagacgcgt gcctcacttg ccgaagcggt acgcgccagc
     3721 gtcaaggcga cgcatccata tgataccccc gccattgtgg tgctgccggt cgagagcgtt
     3781 gacgagcgct atttcgcctg gattctcgca gcgaccacac ccgtggagag cgcctagccc
     3841 acggccgaaa acgcctcgat gaatttagct gaatacgttg caggttcaat tagatatacg
     3901 tcttcggatc caatcaatag agatcctgct gcccggcgaa tgcctgaact accgccgccc
     3961 gtccccgatg tagggcgtct gaacggcaga caacgacgcc gctagcgttg cttcatctac
     4021 atgaacggtg ccgctcaagt ggcttcagga cgagttcagc gcggccattc atagtagccg
     4081 ccaagatcgg tcatgagccg gtcgatcaga tccctagggg ctggcaaatg aaggccccaa
     4141 gatttcacag aaaggtcacg tcatgttccg caatatcgct gccgcgcttg tcgccgcgag
     4201 cgtcatcgcc gctccggttt tggcgcaaga agccgtgtcc ggcgccaata agggctcccc
     4261 ggccgtgccc gcaccggcgg ccaccgtcaa ggactcgaag atcgcgcccg taccggcgac
     4321 caccgtcaag gactcgaaga tcgcgcccgc accggcgacc accgtcaaga ccgtgaaggc
     4381 cgacaaggca gtcaccaagc atcgcaaggt cgcccatcat catcgccacg gcaccaaaat
     4441 ggtcaagcag gtcaaccacg ggaaatatgc ccaccacatg aagcacagcg ggaccacggc
     4501 caagcaggtg tccaataagc ctgatcctgt gaaccaagtt tccacaaagc cggcaaccaa
     4561 gtcgggcgta aactaaaccc caagaatccc gacttcagat ccgagcggag gccgaccctg
     4621 gggccggcct ccagctattg gggcgatatc ctcctgtagt tttatcttac ttgttatcac
     4681 gcagtcccaa tcacgatcgg tagtcccgcg gcgcgccact ccggaagacc gtcttccagt
     4741 cggcgggcgg tgaagccccg cgaacgcagt gctgcaaccg cttcgtagga cagcacgcaa
     4801 taagggctgc gacagtatgc gacgatctcg agtgaaggtt cgagttctga aagccgcgcc
     4861 tcaagggcgc gcagcggaat gttcaccgcg cccggcagat gtcccaacgc gaattcgtcc
     4921 gccgggcgca catcgagcac agtgacggtc ccggcgcgtg atctctggag aagttcttcg
     4981 cgggaaacgg gttccaaagc gtcacgatca gtgaaatagc tgcgaaccaa ccgatcgacc
     5041 tcggccacat tgcgctcagc gattcggcgt atcgctgcca gcaagtcgag aatggtgtcg
     5101 tcggcaagcc cgtaatagac aaatttgcct tcccgccttg ccgtcaccat gccggcacgt
     5161 cgcatctgct ggagatgctg tgaagcattg gcaatcgaaa ggcaggtacg atcggccagc
     5221 acctctacgt tgcgctcacc ctgggcgagt tgctccaaga gttcgaggcg gtgggcatgt
     5281 gccagcgact tggcgacagc ggcgaactgg gcgaacagcg ccaattttgg atgactggtt
     5341 gacatggcgg ccgaattatc ctaattcatt caatggaatg atttaatcat agtgatttca
     5401 atttgttggt caagatttaa aggggccctt agcaaccatg cgcaacgcga tgctggctta
     5461 tgaaccccat atccgtctga ccgcctttgc cggcgtgttt gtcgtaatgg caacttggga
     5521 attcatcggt ccgcgacggg agcaaaccgt tggacgtggc tggcgttggc ccaacaatct
     5581 tggggtggtg gtggttgatg cgctactggt ccggattatc tttcccacca cggccgtggc
     5641 tcttgccctc tttgccgagg cccgtggtct cggccttttt aacgtggtcg cgcttcccac
     5701 ctggtttggt ttggtcgctt cagttatcct cctcgacctc gcgatctact ttcagcatgt
     5761 gctcttccac gccgtgcctg tgctgtggcg gctgcatcgc atgcatcacg cggacctcga
     5821 aatcgacgtg acaaccggac tgcgcttcca tccaatagag atactgctgt cgatggtcat
     5881 taagctcaca gtggtcgtag ctgtcggggc gccggcagtg gccgtgctga tttttgaggt
     5941 gattctcaac gccacgtcga tgttcaacca cagcaacgtg cgtatgcgtg atggctttga
     6001 ccgtgtgctg cgctggctcg ttgtaactcc ggacatgcac cggatacatc actcgattct
     6061 gtcgtgcgaa accaacagca atttcggatt caatttacct tggtgggacc gtttgttcgg
     6121 cacctacaga gcgcagcctg cggccgacca cgaacacatg acaatcggca tcgaccagtt
     6181 ccgcgatccg cgcgaacttg gtctcgatcg catgttgctc cagcccttcc gcggagatgc
     6241 aggcggatat ccgctcggaa atagataatt tggacaatga ggatgggccg cctcctgggc
     6301 gttagcagca gtgtcggcga tgatttttcg cgatcaattc aatctgacgg cgctgaatgt
     6361 gtggctcggt tcactcggcg tttgcgctcc cgttggctat atgattcttt tgccatgatg
     6421 gctttcgttc tcggcgtggt ctttgccctt gccggcgcct tgttcggacc actgtggggc
     6481 agtctttgga acctcacgga tgccacgttt ggcgctactc tggcgctctt gatcccgcgc
     6541 tatgtcgcgc gagactggat tgcgcgcagg tctggcgggc cgcttaaagc ggctgatgcg
     6601 aggcgtcgaa gcagggggcc ggcgcttcat cgcctttgtg cggctcgtcc ttattttccc
     6661 ttcaacttgt cgaatgacgc gctggggctc accggcagcc cgctccacca ctacgttatt
     6721 gccacattcg tctgtatggc acctagcgta gtcgcctatg gtggctcggg catgacggac
     6781 gcggagcgct tggcggcgaa gcggatgcgg tgcgcgacgg cctgcttgca cttggtctac
     6841 tcacagccat tgggctgctg ccgcgactga tcgggtggct gcgcggttcg ttcgaggttg
     6901 gcgaactgtg acggaaggca aaagacattg gtgttctgat catgcgcatc tatctcgacc
     6961 ataacgcgag cacgccgatc gatcccgcgg tggcgcttgc gatgcaaccg cttcttgcgg
     7021 atcatttcgg aaatccttcg agtggacatt gggctgcgac cacagcgaag acggctctgg
     7081 agaccgcgcg gcgccaagtg gccgctcttc tcggctgcca gagcgatgag gtcgttttca
     7141 cgagcggcgg cagcgaggcc aacaatcttg cccttaaagg cgtgttcttt gtgcttcgtc
     7201 ataagggtga ccacatcatc accaccgggg tcgagcatcc agcaatcatc gaaccatgcc
     7261 ggtttctcga acgcacgggt gcgcgcttga cctacttgcc cgttgacggc acagggcgga
     7321 tcgatccccg cgaccttcac aaagccatca cgcccggcac gattttgatt agcatcatgc
     7381 atgccaacaa tgaggttgga accatccagc cgattgcgga ttgcgcccga attgcccacg
     7441 cgcacggcgt tctgttgcac accgatgctg ctcagtctat cggcaaggtt ccaaccgacg
     7501 tcaatgagct cggtgtcgat cttttgtcgc ttgcgggcca caagctctac gcgcccaaag
     7561 gcattggcgc cctgttcgtg cgccgtggcg tcttgctcga accgctgatt cacggtgccg
     7621 gtcacgagag tggccggcga gcaggtactg agagcccgct gcttgcggca ggtctcggcg
     7681 aggcctgtgt gcgtgcacgc gatctcgcca agatggatcg ggtccgcatt ttgcgcgaca
     7741 gcttctggca aatgctgcgc gtgcaatttg gagatcgtgt ggtcctcaac ggacatccca
     7801 cgcatcgctt gccaaacacg ctcaatattt cgttcgtcgg ccagagcggc gcccaaatat
     7861 tggggcggtt ggaggacgtt gcagcctcta cgggatcggc gtgtcactcc ggccgcatcg
     7921 agctgtcacc cgtgttggcg gccatgggaa tcgcgccaga ggtcggtatg ggcgctgtcc
     7981 gtttcagcct ggggcgcgaa acaacgcgca gtgagattga tgcggtggtc gaacgtctgg
     8041 tcaacgtact tgctacggcc gaatgacagg acgtccgatc acaacgggcc aaggcggccg
     8101 ttcaaacagc ctatggtcac tgcatcatcg acaaaggagc cgagtccgat gcccggtggc
     8161 gatcgggcct gcccggctgg ttatcggtgc gctacgccgc cccctcaagc ttcgcgcgtt
     8221 cgcgcacgaa attcgtcagc gcgatgttgt caatcttgcc ggagccgagc agcggcagct
     8281 tttccaggat cagcacctcg gtcggcacca tcatctcgga ggcgccgcgg gcgcgcgcaa
     8341 aggccagcaa atcggagcgc ttggggtctg tcttggtggt gacgagcaca agtcgctcgc
     8401 ctttgcgggc atccggaacc gtagcggcac ccgacatggc gtctggccac agctcggcag
     8461 cgagcgcctc cacggcggcg agcgaaatca tttcgccgcc gatcttggcg aagcgcttgg
     8521 cgcggcccct gatggcgatg aacccctccg ggtcgatcgt cacgatgtcg ccggtgtcgt
     8581 gccagccatc gggcgggcgt tcgatcatgc ccgggttttc ggcgcgcata tagccgagca
     8641 ttacattcgg gccgcgcacg aagaggcggc cgccttcctc gacaccaggg accggctcga
     8701 gccgtgcctc catgccgggc aggagccgcc cgaccgtgcc gaacttgttg aacatcgggg
     8761 tgttgagcgc cagcaccggt gcggtctcgg tgacaccgta gccttccaga atgcgatggc
     8821 cgaatttttc catataggtg cggcgggtcg tctccttcac gggctcagcg ccggccatga
     8881 tgtagcgcag cgaacggaag tcgtaggcgt gggcgctgcg ggcgtagccg gccaggaacg
     8941 tatccgtgcc gaacatgatg gtagcgttca caccatagat catctccggc acgatgcggt
     9001 aatgcagcgg cgaaggatag agatagattc gcacgccgct cacgagtggc agaatgaggc
     9061 cgaccgtcag gccgaaggaa tggaacatcg gcaggatgtt gaacaccttg tcggtgcggc
     9121 cgaagtcgat gcgtgcctgc gcctgtgccg cattggtgag aatgttgcga tgggataaca
     9181 ctacgccctt cggcgtgccc tccgagccag aggtaaacag aatagcggcg gggtcatcgg
     9241 ctgaacgttt caccagtgat cgcttggcgg ccaggaggcc gcgcagcttg tcgccgaagt
     9301 tgatatcgcc acggatgtcc tcaagaaacg taatgctgaa atcaggtgcg agcgcgtcga
     9361 cgatcttttc gagatgcgcc ttttcgacga acacccggga cgtcacgatg tgctcgatct
     9421 tcgccgcgct gcaaccgctg cggatattca tcagaccagc tgtgaaattg atcattgccg
     9481 gcacccgtcc ggccgacatc gcggcgagga tcgtgaccac cgcgccattg gcgttaggca
     9541 gcatgacgcc gatcgcgtca ccggtttctc cgagccgcat cagcttgcga ccaagcaccg
     9601 cgacaccgac cagaaggcgt ttataggtga gcgagccgga aaccgggtct tccacggcaa
     9661 cccgattgcg gccgttgtcg gccgccgcct cgatcaccgc ctcgacgatg gtgcggtcgg
     9721 tcgaggtggt gcgatagatg aggtcggaca tgatggtgta gagcatggcg ccggccgcca
     9781 tgcgccgctt cttgccccgc agcgccggat cgactgagag ccgcacgggc tccaggatag
     9841 tgacggtgac tttcggcacc aaacgtcgcc gcacctggct gctggcgagg taggtgaagt
     9901 aggtcttctc aaggcccctg atgcgcaccg gcaccagcag ggcttccgac ttgtcggcga
     9961 tcattgcggt gccgtcatag accttcatca ggctacctgt gacggtgatg cggccttccg
    10021 gaaagataat gaggggagcg cccgccttga ccgcgttgat gagggtgcgg gtcgccaggg
    10081 gcttggtggg gtcgatcggc aatgcgcggg tgagcttcag gaacggcttc acccaccagc
    10141 gctgggcgat gccactgtcg atggcaaaca cgggctcgcg ttcgagcagc gacaacgcca
    10201 cggcggcatc gagaaagctc acatggttga gggcgatgat ggcgttggga ccggctttgg
    10261 cgacgttttc aacgcccgtc acctcgagcc ggaaaaacgt gcggaaaatc atcgatagca
    10321 ggtcgcgcac cgggctggcc ggcatggtgc gcaggatcac gatggcagcc acgacgttga
    10381 ggacacccaa gccgatcagg atcgtgctgg tcgagatgcc ctgcgccttc agggcgatga
    10441 ggctcaacga ggcgaccgtc atgaacaggg cgttgagcac gttgacggcg gccaccacgc
    10501 gggcgcggcg gtcggccccg gcccaagcct gtacggccgc gaacgatggc acgatgaaca
    10561 acccgccgcc gatcgcgagg ccggcaaggt cgacggcgac gtgggcgccc gggccggcgc
    10621 ggaagacttc gacgatgccg ctgccctggt ggaccgcgac catgccgctc gtcagccagc
    10681 cgagatcaat ggcgaacacc gccagcagta ccgcgccgaa taccgtcggg atcagaacga
    10741 tgcgcccgct ggcgagccaa gccgcgaagc ctgatccgac tgcgaccgct atcgagaaca
    10801 cggccaaata ggcgttgacg acctcctcat tgccgccgag tgcgttcttg accaacggcg
    10861 gcagcagcgt catcaccacg attccgacga gccagaacca gctcaccacc atgccgcccc
    10921 accacaagtg ggactcgcgg tagagttcac gtagcaatgt ccaggtcgac cgcgcaatat
    10981 tgaagtcgat cgcgaggttc ggcgccgcct cgccggtgcg cggaatgaaa agcgcggaaa
    11041 tccagcatgc caacgcaaac cccatcatca agcccgcaaa agacgccgga tttcctccat
    11101 ccttggaggc gaagccggcc acgatggtgc cggttaggat ggcgacgaag gtagcgccct
    11161 cgatcagcgc gttgccgcgc ggcagttcgg cttcggcaag gtgatcgggc agaatgccgt
    11221 atttgatcgg cccgaacagg gccgcaatga tcccgatcag aaacagggcg acgaacagca
    11281 gttccggcga atcgaaccag aagccggcga tcgcgatgcc ggccactgcg atttcaacga
    11341 gcttgagcct ccgcgccacg accgccttgt caaaacggtc agcaacctcg ccgccgattg
    11401 ccgagaggat gaaaaacggg aaaatgaaga tcgcgcccga gagcgcgatc agcttctcgg
    11461 agtttggccc ggcccatttg aacaggatca ggaaggcgag tgcgttcttc agaaaattgt
    11521 cgttgaaggc actgaagaac tggcaccaga acagcggcgc aaatcgccgt gtggccaata
    11581 ggctggaaga cattcgtggg tccgagcgtt gaagttttgt gatcccctaa cctacgcatt
    11641 ctgtggcccg gtcgccagtc tattggctct gcggtattgt cccaatttga agcgccaacg
    11701 aagccgaagg cagggatgca cgtcattgaa cttcatgccg acgcttggcg ttgcatacgt
    11761 ggaaggccgg ttgacggcac ggtttgcaca tcgcagcccc tccgttaatg tcgtgccgcg
    11821 actagccgcc actacgcgtg gctgcgttga acggagagtt ccatggccgt caagcgctca
    11881 ccgacacacc cggacgcgat cttcgtgaac atgtgttgcc agcgttcgac atgtccgtta
    11941 ccggtgctac gaaagcgctt ggcgtatcgc gtcagcaggt acatcgagtc atgtccgaga
    12001 aggcgccgac caccccggag atggcgttgc acctaggcaa agttctgcgg caatgggccc
    12061 tgattcgtgg ctgcgaatgc aaagtactta tgatctgtgg cgtgcgcggc ataaacttca
    12121 acgagagctt catcgcgtat caaaaggtgg cgaccaaagc ggcgtgaggg agcgccatcg
    12181 ctatcatctc tgaaggcccg cgccttagcg cggccgaatg tctgtttgag ccggtgtcgt
    12241 gtatgagggg cagggcgtct gtgcgcggca atttccgcgg ccgttcgcga tctgaatacc
    12301 caagattgcg cttggcggca ctcgtttgcc aatcgccgct cctcgtctat tgtcgcgccc
    12361 gcgcccggcg agcgctgcgc tggctgcgcc aatggatggg gaccacgtca ggagggcaga
    12421 tggcttggac acgtgcggcc gcagtggccg atgtcaagga gcgcggtgtc atggatgtcg
    12481 acgtcggagg agaggaaatc gcgctctact gggtcgatga cgccgtctat gcgacccaca
    12541 atgtatgcac ccatgccttt gcgcgcctgt cggagggatt tctggatggt gattgcatcg
    12601 aatgcccgat tcaccaggcc ctgttcaatg taaagaccgg cgaagcggta gggcctccgg
    12661 cctacacggc ggtaaagacc tatccgtgcc ggatcgaagg caacgacgtg ctcgtcgata
    12721 tttgagccga gcaaatttgg ctcgagcaaa gtcgggcgaa atccatccca tcaacgattt
    12781 tttggcttcg cgacgttggt gtgatttccg ccgctgcacc gacagcctta cgccatggcg
    12841 ttgtcggcgg ccggcatact ttgcgcggac gacgaacgcc accgcacggt ggtgcgaaac
    12901 tcatgcccgc aggtttcgca ggcccaccaa tggcgaacct cgttggaatt cacgtgctgt
    12961 gattttgttg cggctatgat caagtcttgg cactgcggac agtacaatcg tgaaacttgg
    13021 taaggtgcaa tcgaaaacgc cgacgccgtc ccatggtact tcatgtgact gtccttcctt
    13081 ttcgactatc gcgccccaat cccgcctggc ggctacatgc gctgcacatt tgggcgttaa
    13141 caaggcacaa ggacgaagga tgcatgaaat atgacgcgcg cgccgcattg caataaattt
    13201 tgccatcgcg gtgtcgtaat gcgcagccgc tttcatggtc gcgccgcaat gtgcgcatgc
    13261 gtgctctttc gctacggaag tacccccgca gcttttgcgc gcgtcagcag ccgctctgct
    13321 ttcgcgatat gcgggcggtc atacattacc ccgtcgatgc cgatgacacc ggcatcgggg
    13381 gctgccgcaa acgccgcgac gatggcttgt gccttggcga tcgctgcggg cttgggtgta
    13441 aacgcatcat tgatggtcgc gacctgtcta gggtggatcg ccatcttgcc gatgaagcca
    13501 tcgcggcagg catcctcgca ttcgcgg
//
LOCUS       DATILV010000211        18797 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4905691, whole genome shotgun sequence.
ACCESSION   DATILV010000211 DATILV010000000
VERSION     DATILV010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 18797)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18797)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18797
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4905691"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..161
                     /locus_tag="VLJ17_04825"
     CDS             <1..161
                     /locus_tag="VLJ17_04825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001278583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSV22335.1"
                     /translation="PRYRKGVLWSPSYFAASCGGAPISIIRQYIERQRNPQSDSYRAN
                     APQRLSPA"
     gene            558..1781
                     /locus_tag="VLJ17_04830"
     CDS             558..1781
                     /locus_tag="VLJ17_04830"
                     /EC_number="2.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine transaminase"
                     /protein_id="HSV22336.1"
                     /translation="MVRSQTRPEPNGTHDSFDALMEITRRPPVVFIEGRGSWMRDSSG
                     KEYLDFIQGWAVNCLGHCHDAVTHAITAQAGRLLNCSPSFYNEPMIRLAELIARYSGL
                     HRTFFTNSGAEAIEGAIKLARKWGQKYRNGAYEIITMDHGFHGRTLAAMSASGKPRWN
                     QLFEPKVPGFPKVPLNDLEKVEQAITNRTAAVMLEPIQGEAGVFAASDSFLRNLRTLT
                     KRENILLILDEIQTGIGRTGKFFGFEHAGVTPDIMTLGKGLGGGLPLGALVAHEDVCC
                     FDHGDQGGTFNGNAFATAVGCAVMNEIAKPGFLPRVVQTGAYLADSLEALSRKHQGGG
                     LRGKGLLLAIDLGREIGPVVVAEALRRGLLINAPRPQSLRLMPALTVTHDEIDQMISI
                     LDATLEQVTDTRAEA"
     gene            1914..2531
                     /locus_tag="VLJ17_04835"
     CDS             1914..2531
                     /locus_tag="VLJ17_04835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22337.1"
                     /translation="MLRCTSRRGAAAGRAARRARTTLAIAGGGLAVAACTTVDRPVLD
                     ATSIGPSGLRTVAFESIDGPPETLFHKLVTQLAKEANARQVAIVSRESPAQYRIRGYV
                     AAHVQGKRTTITWVWDIYGADRERAMRLTGEAPGASPQRAWAAADDGVVTRMARDGMS
                     RLAAFLASPGPAPTEVLPARDEPSPNVASVPGTEGTLAFLPPSRP"
     gene            2820..3773
                     /locus_tag="VLJ17_04840"
     CDS             2820..3773
                     /locus_tag="VLJ17_04840"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_028174674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0006015 - 5-phosphoribose 1-diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009156 - ribonucleoside monophosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009165 - nucleotide biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HSV22338.1"
                     /translation="MAGTNGAIKLVAGNSNPRLAEAIGARLRTPIAKAPVRRFADMEI
                     FVEILENVRGTDVFVIQSTSYPANDHLMELLIIIDALRRASARRITAVVPYFGYARQD
                     RKVGPRTPISAKLVANLITHAGADRVLTLDLHAGQIQGFFDIPTDNLYAAPVMVRDIR
                     ERFDLSTVMVVSPDVGGVVRARGLAKRINAPLAIIDKRRERAGDSEVMNVIGEVEGRT
                     CVLVDDIVDSGGTLINAADALLEKGAKEVYAYITHGVLSGGAVARITASQLKELVITD
                     SIQATEAVRVAVNIRSLSIATLIGDAIGRTAAEESVSSLFD"
     gene            4118..4615
                     /locus_tag="VLJ17_04845"
     CDS             4118..4615
                     /locus_tag="VLJ17_04845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007569163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjN domain-containing protein"
                     /protein_id="HSV22339.1"
                     /translation="MSLVDIEEQSNNPVDVVERLAAFHEWSFARASDDEVTLLVSGQW
                     TDYQVSFTWMHDIEALHLACAFDLKVPERRRAEVIELAALINEQLWVGHFDVWINDGI
                     IMFRHALVLTGGVAAADAQCEALLGIALDACERHYQAFQLVLWAGKSPREALASMMFE
                     TAGEA"
     gene            complement(4746..5450)
                     /locus_tag="VLJ17_04850"
     CDS             complement(4746..5450)
                     /locus_tag="VLJ17_04850"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HSV22340.1"
                     /translation="MTHDDIKQKLILAGKVLVAEGQDDFTRGHISMRLPDNPMLFFMK
                     PHSVGLDELTKENILVIDLDGNVVGGTSRRHSEVYIHSEIFKARPDVHSVIHTHPPYA
                     VALSASGRALKCYSQPSALFFEALGVYTDTSALIRTQAMGKGVATALGPHRAVLLKNH
                     GVAVVGASIEEAVITVIMLESAAMVQMITEAAGPPGAEFPRADIEKLRQEISQPEQFM
                     VNFDYLARRVHRKEMG"
     gene            complement(5571..7595)
                     /locus_tag="VLJ17_04855"
     CDS             complement(5571..7595)
                     /locus_tag="VLJ17_04855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HSV22341.1"
                     /translation="MKHTIPLPAERPAVMLPPELAAVKQAIELVRQHQLGEANALVAS
                     NSDPVAQKLVEWVLLRRSDSEAALERYAAFIRTNPDWPSIPLLRRRAEEKLWQNRRDA
                     ATVRGFFDGGPTSAVGRLTLARVLMSEGNRGGAEREVRGAWRAAALSDELEAAVLAAF
                     PGVLTRADHLARMDRRIGAKDFGAAMRAAKHIGDDQVAIVKACSAVEAKSTKGGTLLD
                     AVRADAREDLGYALCRLHWLQRNDMPGLNLHGRIVTPKADIAAAVKLVLAASPEDLQW
                     QDTDEWWRERRVLARRLIDLGDAGTAYRVVRAAAPPANPYYRAEFHFMAGWIALRFMA
                     DSATALEHFAQVDQGSADPIVLARAAYWRGRAAEAAGQFNEMRAYYGDAARFPTAYYG
                     QLARARLGLGDIAPLRPPPESLPGEASELVHAADILYAIGERDLVRSFVTDLAQESKD
                     TALLAALGQLTAQRNDAQSMLLIGKTALARGLAIDPYAFPDIGVPSYSSIGPKLDRCI
                     VYSIVRTESGFDQRDISSAKAVGLMQVTPEAGRDTAKRFSISYDWNRLVSDPVYNTQM
                     GVAEVAALLQEYRGSYVMTFAGYNAGRGRVQQWVAQHGDPRDPKVDAVDWIERIPFSE
                     TRNYVQRVMENLQVYRARFGSNATMVEPNLHRAAAIESRAEPVLLETGPQ"
     gene            complement(8183..8536)
                     /locus_tag="VLJ17_04860"
     CDS             complement(8183..8536)
                     /locus_tag="VLJ17_04860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22342.1"
                     /translation="MPNALRKLLRTIAILLIGLGGLTVLAILVFRQAAWMRETETGAA
                     IAPENGRWVSTPKGAVFTLEAGLRNGHAIALTHGTAAWSGLWQETLDMLGAEDYDTIT
                     VDFAPFGFSDRMNVE"
     gene            8766..10241
                     /locus_tag="VLJ17_04865"
     CDS             8766..10241
                     /locus_tag="VLJ17_04865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018324805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HSV22343.1"
                     /translation="MKNVSRRHVLKGMGAAVAVPMLSGAARSGQVTAEQRTIINDASQ
                     LNPTPVYRHWVVKPDQDALFIERLRGELKEAAAEKRPVAIAAARHTMGGQSIPKNGTA
                     ITVENIRCEPNTAGTSFLVNAGTRWHQVISTLDPLGFSPAVMQSNSDFGVASTFCVNA
                     HGWPVPYGPFGSTVRAIKLMVADGTILDCSRTQNPELFSLAMGGYGLLGIILEVEAEM
                     TENLLLRPKFELMPADDFAHRFLSVIDSDPNVRMAYGRFNVERRTFFKEALMITYRPE
                     PKPKEGLPKADRGGLLSAVSRKVYRAQVGSETGKHLRWMAETVAGPHASSGIGTRNSF
                     MNEPVSNLASPDRRRTDILHEYFVPPERFGEFLIACREIIPARKAEFLNVTLRYVAAD
                     DTSILAFAPTRRIAAVMSFSQEFSPEAEAEMLQMTQALIERVIAIGGSFYLPYRLHAR
                     RDQVERVYVKAAHFVDLKLRYDPGRLFRNAMWDTYFAPSKT"
     gene            complement(10217..10408)
                     /locus_tag="VLJ17_04870"
     CDS             complement(10217..10408)
                     /locus_tag="VLJ17_04870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22344.1"
                     /translation="MEKIIEKIKPKNAKCAPLRIRQARYVAQGGYARENNSKAKCNTA
                     DAVHLKFFPAAVQVFDGAK"
     gene            10445..10666
                     /locus_tag="VLJ17_04875"
     CDS             10445..10666
                     /locus_tag="VLJ17_04875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22345.1"
                     /translation="MSRRAATSFLKIFGTLYFLDGAMGVAIGSGFLDLGVIRNGILDQ
                     PLSFKLLASAPHLILGGVAMYSGFVLARR"
     gene            10678..11757
                     /locus_tag="VLJ17_04880"
     CDS             10678..11757
                     /locus_tag="VLJ17_04880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22346.1"
                     /translation="MRKALKLAVMVVAVLAVLALAPVLWVEASCYVEAEPDRAPFQSS
                     LDAGDRRDEVNTYLTYPEWSIVYAYEDFAGVTRMGSESDFAYFRSIRSYWTSLCSVTR
                     IASRRGMVPSDTKSMLYVIGISFAAEMGIKGAYEETIGRITSVIRGEVRTAEDDFALM
                     VADDYAGFLRQTPWYQYPFGERLKAFWSETPLLGSNFIRKIERRFALTLEYGVKAVYA
                     KFIGFLAGLDPAPLSIRSVVTGLDARDIDSLRNVLIVKALPGDASIIETPRYRTFTEI
                     IRVLAVRGENFTEIAGNRDILVTVLAREDLKIDLPAAKPLFEVPLQAQPGWHRVGLDV
                     EVTSLTELIRNIAGPDIRLEHVYDY"
     gene            11747..12097
                     /locus_tag="VLJ17_04885"
     CDS             11747..12097
                     /locus_tag="VLJ17_04885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22347.1"
                     /translation="MTIERAIDRAAVRFVAALVGVALVWFAGLAVFTVVFEPPTFVIF
                     FGPPSAVLSAVSQHDMRIVSGGRGFLVVANGGAGYVRSLYRSGAWLVLPTARDGCGLT
                     DVLSKRQRLATASL"
     gene            complement(12178..13806)
                     /locus_tag="VLJ17_04890"
     CDS             complement(12178..13806)
                     /locus_tag="VLJ17_04890"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HSV22348.1"
                     /translation="MSRGIRITHRLVAIVGFALVVLPAYSAHLTGGPQGVVKSTKGEL
                     LEGIMVQLIAKKNAVRTTVYSNADGRYEFPVLDAGTYTLHIARPREFLPFVKEGVDIN
                     GATPLADIALEYVTDQDTLPPLPEIMAQMTGSEWLLSLSGTGSEKKLLTNNCNWCHSY
                     QQIFRNRYDEEGWRKIVYRMIHGAGSPLININERGRWGNDEEPRLVKWLASVRGPDVN
                     DPQFVMLPRPQGRQTRVVITEYELPRLETATHDVTGDSKGNLWYSTHRSSYIGQLNPA
                     TGAVKEFHVPPVAEGVLPGTHWIYADKNDIIWGSENWAHSIWRLDPKTEEFTRIPWKV
                     REPPNTPMGGNYAIDPDGFIWKARERKVTKVAALTGDPVTSYVLKKFAGTYGSAMSRD
                     GRYFGGGAWPRDGVVVVDTQTANVFEPDTSPRSGPARGEFDLHNNYWAGGRGGQLIKF
                     DTTEKRIHEYPLPTPYASMYSAQTDRNGEVWAGEMHAGRYLRFNPKTVSFTEYVLPEP
                     YGIDRETWIDNSTDPVTVWYVDHEGWLVRIQPMD"
     gene            complement(13964..14437)
                     /locus_tag="VLJ17_04895"
     CDS             complement(13964..14437)
                     /locus_tag="VLJ17_04895"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSV22349.1"
                     /translation="MSLNAQGRWWTGALTTTIWLLASPTTAQQAPLQGTAPKPIAKDY
                     YQRSLETYEFRKAAQSGPERGREIFYYKCWFCHNEFAKTAPQLSGLYQRGTLLSGLPV
                     NDDNVKERIRNGGAAMAAYKYTLSEADLNDLVSFVREKCCWDSDAPPLNPRYQAR"
     gene            14682..15617
                     /locus_tag="VLJ17_04900"
     CDS             14682..15617
                     /locus_tag="VLJ17_04900"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HSV22350.1"
                     /translation="MRALISIAVLGFLAVPVQAAELPGWAYPVNPTPKPPDATKPIQL
                     PGSTKSYTQAQIDDGFNPPDWYADDHPQMPDVVARGRKETNARACALCHLTSGGGHPE
                     SAGISGLPAAYIVRQMNEFKSGARKGARAVAMLPIAKGLDEEDFKAAAEYFAAIKYPV
                     WYKVAETDTVPVSYLGNGAMRFPVEHGGTEPLGNRIIELPQNDLSAESRDPRTGFVAN
                     VPIGSIKKGEEIVTTGAGGKTIQCAICHGSELKGLGEVPPIVGRSPMYIYRQLNDIKI
                     GTRTGAWTPLMKAVVDKLDDADMIAIAAYLVSKGP"
     gene            15744..16757
                     /locus_tag="VLJ17_04905"
     CDS             15744..16757
                     /locus_tag="VLJ17_04905"
                     /inference="COORDINATES: protein motif:HMM:NF015445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HSV22351.1"
                     /translation="MKRPWTRRALLTGAIATGTTIVVKQARAADYRFIQYHNQSEIST
                     LHKNLVAVWEAIRLETNGRVETTVHAENNKLAAGDPAALKMLIAGEIQFFTLMGGIIG
                     TVVPMAEVQQVPFAFRSAADAHKAIDSPLGAYMGEEMAAKGMYLFPVAGFDNGMRQVT
                     TVARPVNKPDDLAGVKIRVPPGQMIFDTFQAFGAEPVTTSANLIYDSIKTGKVGAQEN
                     PLAILENFRIYEVVKYVSMTNHMWSGFNQMAHLATWRGLPDDVKDAITRNVTKYVRQQ
                     RIDQGNVNAGLRDKFIAAGLIFNEVDQSPFRAKLANVYATWKDKLGSKCWILLEAEVG
                     KLG"
     gene            16870..17796
                     /locus_tag="VLJ17_04910"
     CDS             16870..17796
                     /locus_tag="VLJ17_04910"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HSV22352.1"
                     /translation="MLFFALTIHTSGAAEADCRELDRNYTAAKADLASIQLNAMLFAS
                     AAKDCAALARRLIAAGASLQARDRTGAMPLAHAARGGHVALVEKFVAEGAAIDARDLN
                     GATALYAAAEAERPATVAVLLVRGADPNLTGRGGVSPLAAAAFRGNDRIVELLLSRDA
                     DPDHVDGTGKTPIVYAAARGFSLVVRRLLDAGVDAKARYGNDLTALMWAAGHEDGVGA
                     AAAVAVVELLIERGATLDSADNRGRTALMIAAERGDAAVVETLIMHGADRNLRDRSGK
                     AAHDLAGDAVVKAKLAGVSPTSIDRPDTARVP"
     gene            complement(17762..18454)
                     /locus_tag="VLJ17_04915"
     CDS             complement(17762..18454)
                     /locus_tag="VLJ17_04915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013949352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HSV22353.1"
                     /translation="MRATPCVGWVELWRNPSSIPPRDVVPGRFRGVYHRAGRRPGPQS
                     ILRGFVVAALAVVPFAATAQAIEDKAQACAACHGEAGVPSDKSWPVIWGQHQGYLYLQ
                     LRDFKSGARKSDLMGPIAQALGRDDMLALALYFSRKAWPNLRQPLAPEAVAVQAARAN
                     ASVGCTGCHQAGYLGEGTQPRLAGQRADYILKSMMDFRTRSRGNNPGMSDLMSATSED
                     DLKALARYLAGL"
     gene            complement(18470..>18797)
                     /locus_tag="VLJ17_04920"
     CDS             complement(18470..>18797)
                     /locus_tag="VLJ17_04920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HSV22354.1"
                     /translation="SEQQSGNITAVDYNTGKIRWQVKTPQPMIGGILATAGGLVFAGE
                     GNGRFRAYDSKTGKVLWTFNAGAGVNAPPSSYAVDGKQYVVVAAGGNVQLDYKRGNNI
                     IAFTLE"
BASE COUNT         3544 a         5630 c         5813 g         3810 t
ORIGIN      
        1 ggccgcgata ccgcaaaggc gttctgtggt cgccaagcta ttttgctgca tcctgtggcg
       61 gtgcgcccat cagcatcatt cgccaataca tcgaacggca gagaaacccg caatcagact
      121 catatcgggc caacgcgcct cagcgcctat ctccggcgtg aaaccccgca gcttgctgcg
      181 cgaaaattct tggtcaacgt ggcacgcaaa aacggcgtcc ggtgtcctgg tgctggcgga
      241 ggaaacaccg aacagtgttc tcgaattcga ggggctgggc aaggcggtgg ctgcgctcat
      301 taaaaggagc agcccccgtt tccattaaaa tccgttccct attgacactt cgcccccgag
      361 ccgtcatcca tcacgctatg aactattcgc aacttgcccg ccgcagttcc gcacgtgcgc
      421 gccgcttttc agcgggggtg tggaatatgc ggatccgttg agctgatctc aagtaaacca
      481 ctaaggcccc cgccggcgac agcgggggcc tttggttttt ggtccccgtc tcttccggcg
      541 cattgcagga gaacgagatg gtacgatcac aaaccaggcc cgagccgaac ggaacgcacg
      601 attcgttcga cgccttgatg gagatcacgc gtcgcccgcc ggtggtgttc atcgaagggc
      661 gtgggtcgtg gatgcgcgac agcagcggaa aggaatatct ggatttcatc caaggctggg
      721 ccgtgaactg cctcggccat tgccatgacg cggtcactca cgcgatcacc gcccaggcgg
      781 ggcgtttact gaactgcagc ccctcctttt ataacgagcc gatgatccgc ttggcggaac
      841 tgatcgcacg atacagcggc ctgcaccgga cgttcttcac aaacagcggt gcggaagcga
      901 tcgagggagc gatcaagctc gcccggaaat ggggacaaaa atatcgcaac ggcgcctacg
      961 agattatcac catggaccac ggcttccacg ggcgaacgct ggcggcaatg tcggcatctg
     1021 gaaagccgcg gtggaaccag ctgttcgaac ccaaggtgcc aggatttccc aaagtgccgt
     1081 tgaacgatct cgagaaggtc gagcaggcaa tcacaaatcg cacggccgcc gtgatgctgg
     1141 agccgatcca gggtgaggcc ggcgtgtttg cggcgtccga tagcttcttg cggaacctcc
     1201 gcactctgac gaagcgcgag aacatccttc tgatccttga tgaaatccaa accggcatcg
     1261 gaagaacggg gaaattcttc ggcttcgaac atgccggagt cacgccagac atcatgactc
     1321 tgggcaaagg tctcggcggt ggacttccgc tgggcgcgct ggtcgcgcac gaggacgtct
     1381 gttgtttcga tcatggcgac cagggcggca ccttcaatgg caacgccttt gcaacggccg
     1441 tcggctgcgc ggtcatgaat gagatcgcca aaccgggatt tctaccccgg gtcgtgcaga
     1501 cgggagcgta tcttgccgac agcctggagg cgttatcgcg caaacatcaa ggcggtggcc
     1561 tacgcggcaa aggcctgctc cttgcgattg atcttgggcg cgaaatcgga ccggttgtgg
     1621 ttgccgaggc gttgcggcgc gggctgttga ttaacgcgcc gcgtccgcag tcgttgcgtt
     1681 tgatgccggc acttacggtg actcacgatg agatcgacca gatgatcagt atcctggacg
     1741 cgacgctcga gcaggtgacc gacactcgag ctgaggcctg agctcgcgat ctcgcaaacg
     1801 aaagtggaat ccctggacct gggcgcgatt tctgagtatc cctgcatcgg gcgcggcacg
     1861 ttccagtact tgagacccat aaaacggaac ggccggtggg acagggatcg gcgatgttgc
     1921 gttgcacctc tcggcgcggc gctgcggcag ggcgtgccgc gcgcagggca cggacgacgc
     1981 tcgcgatcgc gggcggcggc ctcgcggttg ctgcgtgcac gacagtcgac cggccagtgc
     2041 tggatgcgac gagcattggc ccatcgggcc tacgtaccgt tgcctttgag tcgatagacg
     2101 gcccacccga aaccttattc cataagctcg ttacgcaatt agccaaagag gcgaacgccc
     2161 gccaagtcgc gatagtgtca cgggaatcgc ccgcccaata ccggattcgc ggctatgtgg
     2221 cggcccatgt gcaagggaag agaaccacca tcacttgggt gtgggacatt tacggcgccg
     2281 accgcgagcg cgcgatgcgg ctcactggcg aggcgccggg cgcctcgcct cagcgtgcct
     2341 gggcggcggc cgacgatggg gtggtgaccc gcatggcccg cgacggcatg agcaggctgg
     2401 cggcattcct ggccagccca ggtccggcgc cgacggaagt cttgcccgcg cgcgatgagc
     2461 cttcgccgaa tgtggcgtcc gtacccggta ccgaagggac gttagcgttc ctgccgccgt
     2521 cgcggccata acttggcatc gatgccgcca caaacagccg cggcagggcg agatcacgtg
     2581 caaaatcaat gggatttgag cgttatcggc cccccgctga gacgatcgcc cgccgcgctc
     2641 gatgacaaaa ccaccgggag aacgacttac ctcgtattgc cattgccatt gtgtaattgt
     2701 tatgaacgcc gcgcttggac tttgaattca cggcgttttc cggtggcgaa cctgtgattg
     2761 cttggcctga aaatgccggg acggttactc ccgcaacttc gaccatcagg gagacgtgaa
     2821 tggcgggcac gaacggggcg atcaagctcg ttgccggcaa ttccaatccg cgcctcgccg
     2881 aggccattgg ggcgcgtttg cgcacgccga tcgccaaagc accggtgcgg cgcttcgccg
     2941 atatggagat ctttgtcgag attttggaaa acgtccgcgg caccgacgtt ttcgtcatcc
     3001 agtcgacctc ctatccggcc aatgaccatc tgatggagct gctgatcatc atcgatgcgc
     3061 tgcgtcgtgc ctctgcgcgt cgcataacgg cggtggtacc ctatttcggc tatgcccgtc
     3121 aggaccgcaa agtcggcccg cgcactccga tctcggcaaa gctcgtagcc aacctcatca
     3181 cccacgcggg cgccgatcgg gtgctaacac tcgacctcca tgccgggcag attcaaggtt
     3241 ttttcgacat tccaaccgac aatctttatg ccgccccggt gatggtgcgc gacatccgcg
     3301 agcgctttga cctctcgacc gtcatggtgg tgtcgcccga cgtgggtggc gtcgtgcgcg
     3361 cccgcggcct cgctaagcgg atcaatgccc cgctcgccat catcgacaag cgacgcgagc
     3421 gggcaggtga ctccgaggtc atgaacgtga tcggcgaggt cgaggggcgc acctgcgtcc
     3481 tggtcgacga tatcgtggat tccggtggca cgctgataaa cgccgccgat gcgctgctcg
     3541 aaaagggcgc caaggaggtt tacgcctaca tcacccacgg ggtgctgtcg ggcggtgcgg
     3601 tagcgcgcat cacggcatcc cagctcaagg aactggtgat caccgattcg attcaggcga
     3661 ccgaagccgt acgggtcgcc gtgaatatta ggagcctgtc gatcgcaact ctgatcggcg
     3721 atgccatcgg gcgaactgcg gccgaagagt cggtgtcaag tttgtttgat tgacggccga
     3781 gagagcgtcc cgcccgcgct tttttaagag cgccagcgcg cgcggcggac cccagggccg
     3841 acccacccga gtcaacttgt cgcacgcgtt attggaggcg cgcttgtgga agggcgttcg
     3901 gatggcattg cgggatcgcg gcgaatccta gaacagtcga cacgtcaaat acttccagcg
     3961 gcagaaatga tcagcggccc gagagggccg ctgatgattc aaggcccgcc ataggcggtc
     4021 gccgggccgt gtcggatgga tcgtaggcgc cgccgcagca ccatcgcgcg tgtgcccagt
     4081 cgggttgaaa tggtttcaaa caataggtgg tccggacatg tcgctggtgg atatcgaaga
     4141 gcagagcaac aacccggtcg acgtcgtcga acggctggcg gccttccacg agtggtcgtt
     4201 cgcccgtgcc agcgacgacg aggtgaccct gttggtcagc ggtcaatgga ccgactacca
     4261 ggtgtccttt acctggatgc acgacatcga ggcgctacat cttgcctgcg cattcgatct
     4321 caaggtgccg gagcgccgcc gtgccgaggt gattgagctc gccgcgctca tcaacgagca
     4381 actttgggtc ggccatttcg acgtgtggat caacgacggc atcatcatgt tccgtcatgc
     4441 gctggtgctc accggcggcg tcgcggcggc ggacgcccag tgtgaggctt tgctcggcat
     4501 cgcactcgat gcctgcgagc gccactacca ggccttccaa ctggtgttgt gggccggcaa
     4561 gagcccccgc gaagcgcttg caagtatgat gttcgaaact gccggagagg cgtgacacag
     4621 gccggcagtt tggcgcgccc gcagcaggat tggtcgagct tttgcggagt tcattccatg
     4681 tgcgcttagc ggcctctgat gggtttcgcg gacttatcat cgggccggcc gaaggccggg
     4741 gtggctcaac ccatctcttt gcggtgcact cggcgcgcca gataatcgaa attgaccatg
     4801 aactgctcag gttgggaaat ttcctgcctg agcttctcaa tgtcagcgcg cgggaattcc
     4861 gcgccggggg ggccggcggc ttcggtgatc atctgcacca tggcggcgct ttccagcatg
     4921 atcacggtga tcaccgcctc ctcgatggag gcgccgacga cggcgacgcc gtggttcttg
     4981 aggagtactg cgcggtgtgg gcctagcgcg gtcgcgaccc cctttcccat ggcctgggtg
     5041 cgaatgagtg cgctggtgtc ggtataaacg ccaagcgctt caaagaacag cgcgctcggc
     5101 tggctgtagc acttgagcgc acgcccgctt gccgacagcg caacggcata cggcggatgg
     5161 gtgtgaatca cactgtgcac atccggccgt gccttgaaga tttccgaatg aatgtagacc
     5221 tcgctgtggc gtcgcgacgt gccacccaca acattgccgt cgagatcgat gacgaggatg
     5281 ttctccttcg taagctcgtc aagcccgacg ctgtgcggct tcatgaagaa cagcatggga
     5341 ttgtcaggca accgcatcga aatgtgaccg cgcgtaaagt catcctgtcc ttcggcgacc
     5401 agcaccttgc cggcgagaat tagtttttgc ttgatatcgt catgagtcat cgtgacggga
     5461 tcctggattg gcggcctcgt agtgtgggta atggcgtcca ccgcggctcg caaggccggc
     5521 tgcgccggtc cgccgtcgtt accggagctt cacctggaac gagttctacg tcactgggga
     5581 ccggtttcca gcaagaccgg ttctgcccgt gattcgatcg ccgccgcgcg gtgcagattg
     5641 ggctcgacca tcgtggcgtt ggagccgaag cgcgcgcggt aaacttgcaa attttccatt
     5701 acgcgttgga cgtagttgcg cgtctcagag aacgggatgc gctcgatcca atcgaccgca
     5761 tcgaccttgg gatcgcgcgg atcgccgtgc tgcgccaccc attgctgaac ccggccgcga
     5821 ccggcattgt aaccggcgaa cgtcatgacg tacgagccgc gatactcctg gagcaaggcg
     5881 gcgacctcgg cgacgcccat ctgggtgttg taaaccgggt cggacacgag ccggttccaa
     5941 tcataggaga tgctgaaccg ctttgcggtg tcacgaccgg cttccggagt gacctgcatc
     6001 agccccacgg ccttggccga ggatatgtcg cgctgatcga agccactttc tgtgcgtacg
     6061 atcgaataga cgatgcagcg atcgagtttc gggccgatgg agctatagga cgggacgccg
     6121 atgtcgggaa acgcatacgg gtcgatcgcg aggcctcgcg ccagcgccgt cttaccgatg
     6181 agaagcatcg actgcgcgtc gttgcgttgc gcagtgagct gccccagcgc tgcaagtagg
     6241 gcagtgtcct tgctctcttg ggcgagatcg gtcacgaacg acctgacgag gtcgcgttcg
     6301 cctatcgcat aaaggatgtc tgcggcgtgc acgagttcgg acgcctcgcc gggaagcgat
     6361 tccgggggag gacggagcgg tgcaatgtcg ccgaggccga gccgggcacg ggccaattgg
     6421 ccataatagg cagtgggaaa tcgagcagcg tccccatagt acgcgcgcat ctcgttgaat
     6481 tggccggccg cctcggcagc gcggccgcgc caataggcag cacgcgcgag gacgattgga
     6541 tcagcagagc cttgatcgac ttgcgcgaaa tgctccagtg cggtggccga atcggccata
     6601 aaacgcagcg cgatccagcc ggccatgaag tgaaattcgg cccggtaata gggattagcc
     6661 gggggcgcgg cggcgcgcac gacacggtac gcggtgcctg catcgccgag atcgatgagc
     6721 ctgcgggcga gcacgcgacg ctcgcgccac cattcatcgg tgtcctgcca ctgcaaatcc
     6781 tccggcgatg ccgcgagcac aagtttgact gctgccgcaa tgtctgcttt gggagttaca
     6841 atgcggccgt gaagatttaa gccgggcatg tcgttgcgct gcagccaatg cagacggcat
     6901 aatgcgtagc ctagatcctc gcgcgcgtcg gcgcggactg catcgagcag cgtcccgcct
     6961 ttggtggact tcgcctccac ggcgctgcat gccttgacga tcgcaacttg atcgtcgccg
     7021 atgtgtttgg cagcacgcat cgcagcgcca aaatccttgg caccgatgcg ccggtccatg
     7081 cgcgccaaat ggtcggcgcg ggtcagcacg cctgggaatg ccgctagcac tgcggcttcc
     7141 agttcgtccg acaatgccgc cgcccgccat gctccgcgaa cctcgcgctc agcgccgcca
     7201 cggttgccct cgctcatcag aacgcgcgcg agcgtgaggc ggcccactgc gctagttggc
     7261 ccgccgtcaa agaaaccgcg caccgtggcg gcatcgcgcc gattctgcca aagcttctct
     7321 tcggcacgac gacgcaatag cggaatgctc ggccagtcgg gattggtgcg gatgaaggcg
     7381 gcgtagcgct ccaaggcggc ttcgctgtca gagcgccgta gcagcaccca ttcgaccagc
     7441 ttctgtgcga ccgggtcgct atttgatgcc accagcgcgt ttgcttcacc cagctgatgc
     7501 tggcgcacca gctcaatcgc ctgcttcacg gcagcgagtt cgggcggcag catcactgcc
     7561 ggtcgttcag cgggcagggg gatcgtatgt ttcacacttt tacgttcgga tcgctgtgcg
     7621 gctgtgctgc gcttcgctgc cggcgcgatg ccgcccttat gatgctctgc ccgggccgtt
     7681 ttgctggttt gcttcggtat gggcttgtgg ctttgagccg ccaccgcatg aagcgttccg
     7741 gccgcggctg tagccagagc gagcagccag actgcggcgc aacctcgcat tcgcgtcgac
     7801 cgcggctgat cggcggcatg cgcgcttgtg ccccgaacgt gcgcggcaac acaaagtcga
     7861 tctaagctta gcttcgaggc acgaatcgtc ccaccctccc acttccttac ggcagagtct
     7921 aacatgcccg cccggatatc aaccatactc gcccgaatat caacaccggt gaatccctta
     7981 agcttctggg gcctctccat ccaaggaggg gggtaagcta tcgagaatcc gtgtgctgcg
     8041 tcactttaga acgaaagcag agacacgctc gggagaacga atttccacta cagcgccagc
     8101 gccgaaagaa tgcccgagca ccgcgcgctc aaggcccttc gattacacct ttgatccgat
     8161 cgggttggtc cgtacgtgtc acctactcga cgttcatgcg gtcagaaaaa ccaaagggcg
     8221 caaaatcgac cgtgatggta tcatagtcct ccgcgccaag catatcgagc gtttcttgcc
     8281 atagtccgct ccatgccgct gttccatgcg tcagggcgat agcgtgcccg ttgcggagcc
     8341 cggcctccaa ggtgaagact gcgcctttgg gtgttgacac ccaccgtcca ttctccggcg
     8401 ctattgcggc accagtttcg gtttcgcgca tccatgcggc ttgtcgaaac accaaaattg
     8461 ccaaaaccgt caagccgccc aatccgatca gcagaattgc gattgttcgc agcaattttc
     8521 gtaaagcatt cggcatcacg aattggctcc cttgagctgt gcatgaatat tgtttgacgg
     8581 attgtcgcag caggcggctg aaagtatacg ccctcatagt attcgatcgg ctgccgcgcg
     8641 tgctgtcctt aacgcagttt ctgcgatttg gcatcatgcg ggcgaaaggc acggtcggcc
     8701 tgcggacaaa tatcgacact cagctgaatt tattctggct atgacgcatc acagagagaa
     8761 cgcacatgaa aaatgtctcc agacgtcatg tattgaaggg aatgggtgcg gccgtcgctg
     8821 ttccgatgct gtccggtgcc gcacgatccg ggcaggtcac tgctgaacag cgtacgatca
     8881 tcaacgatgc gagccagctc aatcccactc ctgtataccg ccactgggtg gtaaagccgg
     8941 atcaagacgc gctgttcatt gagaggttgc gcggcgagct caaggaggcc gcggccgaaa
     9001 agcgccccgt agccatcgcg gcggcgcggc acaccatggg tggacaaagc attccaaaga
     9061 atggcacggc gattaccgtc gaaaatatcc gttgtgaacc aaataccgcg ggcacgagct
     9121 ttctggtcaa tgccgggacc cgctggcatc aagtcatcag cacgctcgac ccgctcgggt
     9181 tttctcctgc ggtcatgcag tcgaacagcg attttggggt tgcgagtaca ttttgcgtca
     9241 atgcccatgg ctggcccgtg ccctatggcc catttggttc cacggtccgt gcgatcaagc
     9301 tgatggtggc cgacgggacc atcctcgact gctcgcgaac acaaaatccg gagcttttca
     9361 gtttggcgat gggcggctac ggccttctcg gcattattct cgaggtcgag gccgagatga
     9421 ctgaaaatct attgctgcgg cccaaattcg aattgatgcc ggcagatgat ttcgcgcacc
     9481 ggtttctaag cgttatcgat agcgacccaa atgtcagaat ggcatatggc cgtttcaacg
     9541 tggaacgccg tactttcttc aaagaagcat taatgatcac ctatcggccc gagccaaaac
     9601 ccaaggaagg cctgccgaag gccgaccgcg gtggattgct ctctgcggta tctcgtaaag
     9661 tctatcgcgc ccaagtcggt tcggagaccg gcaagcacct gcgctggatg gcggaaacag
     9721 tagctggccc gcatgcatcg tcgggcattg gcacccgcaa ttcgttcatg aatgaacccg
     9781 tgtccaattt ggcgagcccg gacaggcgcc gaaccgacat tctgcacgaa tatttcgttc
     9841 caccagagcg gttcggcgag tttttgatcg cgtgtcgcga aatcattccg gcgagaaaag
     9901 ccgaattcct caatgtcacg cttcgatacg tggcggcgga tgacaccagc attttggcat
     9961 ttgccccaac ccggcgtatt gctgctgtca tgtcgttctc gcaggagttc tcgccggagg
    10021 ccgaagccga gatgctgcag atgacgcaag cgcttatcga gcgggtgatc gccattggcg
    10081 gcagtttcta tctcccttat cgcctgcatg cgcgccgcga tcaggtcgaa cgggtctatg
    10141 tcaaagcggc gcacttcgtc gatctgaagc tgcgctacga tccaggccgg ttgttccgca
    10201 acgccatgtg ggatacctat tttgcgccgt cgaaaacctg aacagctgct gggaaaaact
    10261 tcagatggac agcatccgca gtattgcact tggctttgct gttgttctcg cgtgcgtaac
    10321 cgccttgagc tacataccgg gcttgacgga tgcgcaaggg cgcacatttg gcatttttag
    10381 gcttaatctt ttcaatgatc ttctccatgg cggctccgcg ctctgggctg cgatcgccgc
    10441 gctgatgtcg cgacgagccg caacatcgtt cctgaaaatt ttcggtacgc tgtatttcct
    10501 cgacggcgca atgggggtcg ccatcggctc cggcttcctc gatcttggcg tgatccgcaa
    10561 tggcatcctc gatcagccgc ttagcttcaa gttgttggcc agcgcaccgc atttgattct
    10621 tggcggcgtg gcgatgtaca gcggtttcgt tcttgctagg cgatagtgct aaagcgtatg
    10681 cgcaaggcgt tgaagcttgc cgttatggtc gtcgccgttt tggcggtttt ggccctcgcg
    10741 ccggtgcttt gggtggaggc ctcctgctat gtcgaggccg aacccgatag ggcgccattt
    10801 caatcatcgc tcgatgcggg cgatcgtcgg gatgaggtga atacctatct gacctatcct
    10861 gaatggtcta tcgtttacgc ttacgaggat ttcgcgggcg tgacacggat gggaagcgaa
    10921 tccgattttg cttatttccg ctccatcagg tcttattgga cgagcctttg tagcgtcacg
    10981 cgcattgcgt cacgccgtgg catggtaccg agcgatacca agagcatgct ttatgtgatt
    11041 gggatcagtt ttgctgccga aatgggaatc aagggtgcat acgaagagac gatcggccgg
    11101 atcacatctg tgatcagagg tgaagtccgc accgcagagg acgacttcgc actcatggtt
    11161 gcggacgatt atgccggctt tctccggcag actccctggt accagtatcc gttcggagaa
    11221 agactgaaag ctttctggtc ggagactccg ctgctgggca gcaacttcat ccgaaaaatc
    11281 gaaagacgat ttgcgcttac gctcgaatac ggcgtcaagg ccgtctatgc caaattcatt
    11341 ggctttcttg ccggtctgga tcctgcgccg ctgagcatcc gcagcgtggt caccggcctt
    11401 gatgcgcgcg acatcgattc cctcaggaac gtcctcatcg ttaaagctct tcccggagat
    11461 gcaagcatca tcgagacacc acgctatcgg acgtttacgg aaattatacg cgttcttgca
    11521 gtgcgcggag agaattttac cgagattgcc ggaaatcgtg atattcttgt tacggtcctt
    11581 gccagggagg acttaaagat tgatctaccg gcagcaaaac ccctgttcga ggttccgctg
    11641 caagcccagc ctggctggca tcgggttggc ctcgacgttg aggtgacgtc attgaccgag
    11701 ctgatcagaa atatcgccgg cccggatatt cggctggagc atgtctatga ctattgagcg
    11761 agcgattgat cgcgctgcgg tgcgctttgt ggctgcgctg gttggtgtcg cgctcgtatg
    11821 gtttgctggc cttgcggtgt tcaccgtggt tttcgagcct ccgactttcg ttatcttttt
    11881 tgggccgccg tccgcggtgc tttcagccgt aagccaacac gacatgcgca ttgtttccgg
    11941 cgggcgcggg tttcttgttg tggcgaatgg tggggccgga tatgtgcgat ccttgtatcg
    12001 ttccggcgcg tggcttgtcc ttccgacagc gagagacggc tgcggactga cggacgtgtt
    12061 gagcaaacgg cagcggctgg ccaccgcgtc gctctgattt cgctgttccg cgaagaaccg
    12121 ttttccggag tttccagcat cgcggctggc accattgcga tggctgttcg ccggcctcta
    12181 atccatcggc tgaatgcgaa ccagccagcc ttcgtggtcc acgtaccaga ccgtcaccgg
    12241 atcggttgag ttgtcgatcc aggtttcgcg gtcgatgccg tacggttcgg gcagaacgta
    12301 ttcggtgaag ctcacggttt tcgggttaaa gcgcaaatag cggcccgcgt gcatttcgcc
    12361 ggcccaaacc tcgccattcc ggtcggtctg ggccgaatac atggaggcgt agggcgtcgg
    12421 cagcgggtat tcgtggatgc gcttttccgt ggtgtcgaac ttgatgagct gaccgccgcg
    12481 gccgcccgcc caatagttgt tgtgcaggtc gaattcgccg cgcgccgggc cggagcgcgg
    12541 cgaggtgtcg ggctcgaaca cgttcgctgt ctgggtgtcc accaccacga cgccgtcgcg
    12601 cggccaggcg ccgccgccga aatagcggcc gtcgcggctc atggcgctcc cataggtgcc
    12661 ggcaaacttc ttgagtacgt agcttgtcac cggatcgcca gtgagggccg ctaccttggt
    12721 gaccttgcgc tcacgcgcct tccagatgaa accgtccgga tcgatcgcat agttgccgcc
    12781 catcggggtg ttgggcggct cccgcacctt ccaggggatg cgcgtgaact cttcagtctt
    12841 cgggtcaagc cgccagatgc tgtgagccca gttttccgag ccccagatga tgtcgttctt
    12901 gtccgcatag atccaatgcg tgccgggcag cacgccctcc gccaccggcg gcacgtgaaa
    12961 ttctttgacg gcgccggtcg cgggattgag ctggccgata taggagctgc ggtgcgtcga
    13021 gtaccacaga ttgcccttgg aatcgccagt gacgtcatgg gtcgcggtct cgagccgcgg
    13081 cagttcgtat tcggtgatca cgacgcgggt ctgccgaccc tgcggacggg gcagcatcac
    13141 gaattgtggg tcgttcacat ccggaccgcg taccgaggcc agccatttca cgaggcgggg
    13201 ctcctcgtca ttgccccaac ggccgcgctc gttgatgttg atcagcggtg agccggcgcc
    13261 gtggatcatg cgatagacaa tcttgcgcca gccttcctca tcgtagcggt tgcggaagat
    13321 ctgttggtag gagtggcacc agttgcagtt gttggtgagc agtttctttt ccgagccggt
    13381 accggacagg ctcagcagcc attccgaccc ggtcatttgt gccatgatct ccgggagcgg
    13441 cggcaacgta tcttgatcgg tgacgtattc gagcgcgata tcggcgagcg gcgttgcccc
    13501 atttatgtcg acgccttctt tcacgaaggg gaggaactcg cgcggtcgcg cgatgtgcag
    13561 cgtgtaggtg ccggcgtcga ggaccgggaa ttcataacgt ccgtcggcat tgctgtagac
    13621 cgtagtgcgc accgcattct tcttggcgat gagctgcacc atgatgcctt cgagcagctc
    13681 gcccttagtg gacttcacca cgccctgagg gccgcccgtg aggtgggcgg aataggccgg
    13741 cagtaccaca agggcaaatc ccacgattgc gacgagccgg tgggtgatgc ggatacctct
    13801 cgacatgatg ccctcctgat gaaccttcat ctttggtcgc ggcccttatc cttccccgac
    13861 ttcggggagg gataaggggg cgcggcaccg ccttgcctat gtcacccttc tcggcgctct
    13921 gcgccaccct tgccgagacg gtaagggata agaaaaggac cgctcacctc gcttgatagc
    13981 gcggattgag tggtggcgca tcggagtccc agcagcactt ctcccgcacg aagctcacca
    14041 gatcgttcaa gtccgcttcg ctgagcgtat atttgtaggc tgccattgcg gcgccgccat
    14101 tgcggatccg ctctttgacg ttgtcgtcat tcaccggcaa tccggacagc agcgtgccgc
    14161 gctggtagag cccactaagc tgcggggcgg tcttggcgaa ttcgttgtgg caaaaccaac
    14221 acttatagta gaagatttca cgcccgcgct ccggtccgct ctgggcggct ttgcggaact
    14281 cgtaggtctc aagcgagcgc tgatagtagt ccttggcgat gggcttgggc gccgtccctt
    14341 gcagtggcgc ctgctgtgcg gtggttggtg acgcgagcag ccaaatcgtg gtcgtcaacg
    14401 cgccggtcca ccatcgccct tgcgcgttga gactcatgac ttcccccttg cgtctgacgc
    14461 cggatgtggc ttgttttgcc ccaataatag caaatttctt ggtgcgtttg gcgagaaatt
    14521 gcctcgctgg agggcgggtt ccgttcagcc tgccccctat cgtcaaccgc gacggcgtcc
    14581 gctaaactcg tgctgcagtc cgggccggcg cccagccgcg agatatccgg tcgcgcgtcc
    14641 gtgatgaacg gtcacataaa aacacagaag ggaggtttaa gatgagggca ttgatttcca
    14701 tcgcggtgct cggcttcttg gccgtgccgg tgcaagccgc ggagcttccg ggttgggcct
    14761 atccggtcaa tccgacaccg aagccgccgg atgccaccaa gccgatccag ttgccgggca
    14821 gcactaaatc ctacacccag gctcagatcg acgatgggtt caatccgccg gactggtatg
    14881 cggacgacca tccgcagatg ccggatgtcg ttgcccgtgg ccgcaaggaa acaaacgcac
    14941 gggcctgcgc cctgtgtcat ctgacgagcg gtggtgggca tccggaatcc gccggcatct
    15001 ccgggctgcc ggccgcatac atcgttcgcc agatgaatga gttcaaaagc ggcgcgcgca
    15061 agggtgcgcg tgcggttgcg atgcttccga tcgctaaggg tctcgatgaa gaagacttta
    15121 aggcggcggc tgaatacttc gccgccatca agtacccggt gtggtacaag gtggccgaaa
    15181 ccgacaccgt gcccgtttca tacctcggca acggcgccat gcgcttcccg gtggaacacg
    15241 gcggcacgga gccgctcggc aatcgcatca tcgagttgcc acagaacgac ctttccgccg
    15301 agagccgcga tccgcgcacc ggcttcgtgg ccaatgtgcc gatcggcagc atcaagaagg
    15361 gcgaggagat cgtcaccacc ggcgcgggcg gcaagaccat ccaatgcgcg atctgccatg
    15421 gtagcgaact caagggcctc ggcgaggttc cgccgatcgt tggacgctcg cccatgtaca
    15481 tctatcgcca gctcaacgac atcaagatcg gcacccgtac cggtgcctgg acgccgttga
    15541 tgaaggcggt ggtggacaag ctcgacgatg ccgacatgat cgcgatcgcg gcgtatctcg
    15601 tatccaaagg gccgtaggag gcgcagcgca agaccggggg gtgggcaaag gtgtgtcttc
    15661 gcgccgtgcc cgcctgcagc gatggtgggc gcccttcgtt ttgcccacct acgaggacgg
    15721 attgcccacg cggagggaac acgatgaaga ggccctggac gcgacgcgcg ctgttgaccg
    15781 gagcaatagc gacgggaacg accatcgttg tcaaacaagc acgtgccgct gactacagat
    15841 tcatccagta tcacaatcag tccgagatca gtacactcca caagaatttg gtcgccgtgt
    15901 gggaagcgat ccgcctggag accaacggac gcgtggagac caccgtccac gcggaaaaca
    15961 acaagcttgc agccggcgat ccggcggcgt tgaagatgct gatcgcgggt gaaatccagt
    16021 tcttcactct gatgggcggc attatcggca cggtggtgcc catggccgaa gtgcaacagg
    16081 tgccgttcgc attccgctcc gccgccgacg cgcacaaagc catcgacagt ccgctcggcg
    16141 cctatatggg cgaggaaatg gccgcgaagg gcatgtatct gtttccagtc gcgggtttcg
    16201 acaacgggat gcgccaagtc accaccgtgg cgcgcccggt caacaaaccg gacgacctcg
    16261 ccggcgtgaa aatccgcgtc ccgccagggc agatgatctt cgacacattc caggcgttcg
    16321 gcgccgaacc ggtgacgaca tcagcaaacc tcatctacga ctccatcaag accggcaagg
    16381 tcggggcgca ggaaaatccg ctcgccatcc tggagaattt ccgtatctac gaggtggtga
    16441 agtacgtaag tatgactaac cacatgtggt cgggtttcaa tcagatggca catcttgcca
    16501 cttggcgcgg cctgcctgac gacgtcaaag atgcaatcac ccgcaacgtt accaaatacg
    16561 tacgtcagca acgcatcgac cagggcaatg tcaacgctgg cctgcgcgac aagttcatcg
    16621 ccgccggtct tatcttcaat gaggtcgacc agtcgccgtt ccgcgctaag ctcgcgaacg
    16681 tctacgccac ctggaaggac aagctcgggt cgaagtgctg gatactgctg gaggcggagg
    16741 ttgggaaatt ggggtaaatg tcatgcgccg cttgaagcga tcgtcttcgg tggcgcaatg
    16801 cggggacgac ctcgccaggg gcactgccgg tcccggattt cgcttcgctt cacctgggct
    16861 acgagcttgg tgctcttttt tgcgttgacg attcacactt ccggcgccgc cgaagcggac
    16921 tgccgtgagc ttgatcggaa ctacacggcg gcaaaggccg acctcgcctc gatccaactc
    16981 aacgccatgc tgttcgcctc ggccgcgaag gattgcgctg ccctggcgcg acggctcatc
    17041 gctgccggcg cgtcattgca agcgcgcgat cggacgggcg ccatgccgct tgctcacgca
    17101 gcgcgtggcg ggcatgtggc gctggtcgaa aagttcgtcg ctgagggggc cgcgatcgat
    17161 gcacgtgatc tcaacggcgc aaccgctctt tatgcggccg ccgaggcaga gcggcccgcc
    17221 accgtggcgg tgctgcttgt tcggggcgcc gatcccaatt tgacaggacg cggcggcgta
    17281 tccccgctcg ccgccgcggc ctttcggggc aatgaccgta tcgtcgaact tctgctttct
    17341 cgcgacgccg atccggatca cgtggatggg accggtaaga cgcccatcgt ttatgcggcc
    17401 gctcgcggtt tctcgctcgt cgtgcgccgt ctgctcgacg ctggcgtcga cgccaaggcc
    17461 cgctacggca atgatctgac ggcgttaatg tgggcggctg gtcacgaaga cggcgtcggc
    17521 gcggcagcag ccgtcgcggt cgtcgaactt ttgatcgagc gcggcgccac cttggactcc
    17581 gccgataatc gcggccgcac ggccctcatg atcgcggcgg agcgcggcga tgctgccgtg
    17641 gtggagacgc tcataatgca cggtgccgac cgtaacctcc gcgacagatc cggtaaggcc
    17701 gcccatgatc tcgccggtga tgccgtggtg aaggcaaagc ttgccggcgt ttcgcccact
    17761 tctatagacc ggccagatac cgcgcgagtg ccttgagatc atcctccgat gtcgcgctca
    17821 tgaggtccga catgccggga ttgttaccgc gggaacgggt gcggaaatcc atcatgctct
    17881 tcaagatgta gtcggcccgc tgtccggcaa ggcgcggctg ggttccctcg cctaggtatc
    17941 cggcctgatg gcagccggtg cagccgactg atgcattggc acgcgcggct tgcaccgcaa
    18001 ctgcctctgg ggcgaggggt tggcgcagat tgggccatgc tttccgtgaa aaataaagcg
    18061 cgagcgccaa catgtcgtcg cgccccaaag cctgggcgat cggccccatc agatcacttt
    18121 tgcgggcgcc actcttgaag tcgcgcagtt gtagatacag gtagccttgg tgctggcccc
    18181 agattaccgg ccacgatttg tccgatggaa cgccggcctc gccgtggcag gctgcacaag
    18241 cctgcgcctt atcctcaatt gcttgggcgg ttgcggcaaa cggaacaacc gccagcgctg
    18301 cgacgacgaa gcctcgtagg atggattgcg ggcccggcct tcggccggcc cgatgataaa
    18361 ccccgcgaaa cctacccggg acgacgtcgc gcggagggat cgaggatggg tttcgccaca
    18421 gttcaaccca tcctacgcac ggcgtcgctc tcatttttgc aagcccaaat tactccagcg
    18481 tgaaggcgat aatattgttg ccccgcttgt agtcgagctg gacattgccg cctgcggcga
    18541 cgacgacgta ttgcttgccg tcgaccgcat aggaggacgg cggcgcattg acaccggcgc
    18601 cagcgttgaa agtccataac accttgccgg ttttggagtc ataggcgcgg aagcgcccat
    18661 tgccctcgcc ggcaaacacg aggccgccgg ctgtcgccag aatgccgccg atcatcggct
    18721 gcggcgtctt cacctgccag cgaatcttgc cggtgttgta atcgaccgcc gtgatgttgc
    18781 cggactgctg ttcggac
//
LOCUS       DATILV010000212         4165 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2608494, whole genome shotgun sequence.
ACCESSION   DATILV010000212 DATILV010000000
VERSION     DATILV010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4165
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2608494"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..617
                     /locus_tag="VLJ17_04925"
     CDS             <1..617
                     /locus_tag="VLJ17_04925"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HSV22355.1"
                     /translation="FFGWQHPRQLTRSICVYVDPRLIVVDPDCRFDEVDLQPKMLFED
                     IDLWQTVGKLKAQIGSCDPSSRLYAEALGGVLAHELLLLNGTIDVSKQAHRGGLARWQ
                     QRRIIDFMEEHLAEDISLGALAGLVRLSPYHFVRSFKQSFGKPPHRYWTDRRIDRAKA
                     LLSNPAASITQIALDLGFRTTSAFSATFRRVMGETPTNYRRGLR"
     gene            826..2337
                     /locus_tag="VLJ17_04930"
     CDS             826..2337
                     /locus_tag="VLJ17_04930"
                     /inference="COORDINATES: protein motif:HMM:NF009120.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HSV22356.1"
                     /translation="MRSRFVNPKREQIRVRPAHLTFAALVALIATGDQVDAASRRSGR
                     PVESITSRTAGEPILAIVSLRNQQVTVYDANGWILRAPVSSGQKGRETPAGIFSIIQK
                     EAEHYSNMYDDAYMPHMQRITWSGIALHGGPLPGYPASHGCVRMPFDFAERLFDATRL
                     GMRVIVAPGDVAPVEIAHPALFRSKRGAGAFAAARAAEADEAARKADEARLAAVTASR
                     EAMRATISVRVAENLKLRAETQLAAAETARGTAVSAEAKERAEDAKAKAVARIADLQA
                     QLALAKAELQPKLDAVAPARDAAVAAETARGAAAEAAREAARELEPVSVFISRKTQRL
                     YVRRAFQPILESPVTIRDPDRPMGTHVFTAIERINGDSDVRWSVVSLDAARPQGAVVK
                     PHGRTRGGRDIEPVSTDQGGASTALDRIVIPQDVLDRLAGMASPQSSLILSDEALSSE
                     TGKGTDFVVVLSDEPQGGIKFRRRAPRTEVRYERTRNRLPYSRSPFAGPFSIW"
     gene            3070..>4165
                     /locus_tag="VLJ17_04935"
     CDS             3070..>4165
                     /locus_tag="VLJ17_04935"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV22357.1"
                     /translation="MKITLSLALLGVLIFATVADAQTTVLRGARVIDGTGGPPLENAT
                     IVVRDESIVAIGPSANTSVPDGAEIVDYAGKSIIPGLISAHSHIGIFVGLKAAAENYN
                     RESILRQLKQLEAYGVTTVMSLGLNGPLFYELRPELHAGRVPGADLFGADSGIGVVGG
                     QPSAAVVPVGDNQIVRPDGTEAARLAIREMAARKADMVKIWLDDAGRSLPAKVTPEVY
                     SAVIDEAHKNGLRVAAHIYDLDDAKAIVRAGVDIIAHGVRDKPVDAEFIDMMKARSLW
                     YVSTIVLDYTNYVFAEQPPWMREPFFQRALHPAVRTLLDDPAYRERTLGLPAAAKNRA
                     AVATNKQNLKALHDAGVQIALGSDSGVGLRI"
BASE COUNT          810 a         1263 c         1289 g          803 t
ORIGIN      
        1 ggttttttgg ctggcaacat ccgaggcaac tgacgcgatc gatatgcgtg tatgtcgatc
       61 cccggttgat tgttgtcgat cccgattgcc gctttgatga ggtcgacctt cagcccaaga
      121 tgttgtttga ggacatcgac ctttggcaaa ccgtcggtaa actcaaggcc cagattggca
      181 gttgtgatcc atcatcacgc ctgtatgcgg aggcacttgg cggagttttg gcgcacgagc
      241 tcttgcttct taacggcaca atcgatgtgt caaagcaagc tcaccgaggg ggactcgcga
      301 gatggcaaca gaggcggatc atcgatttca tggaggagca tctcgcggag gacatttcgc
      361 tgggcgcact tgccggactc gttcggttga gcccttacca ttttgtgaga tcgttcaagc
      421 agtcttttgg gaaaccgcca caccgttact ggacggatcg ccgcatcgat cgcgcaaagg
      481 cgttgctctc caatcctgct gcatcgatta cccagatcgc gttggatttg ggtttcagga
      541 cgacaagcgc attcagcgcc acgttccgtc gggtgatggg agagacgcca acgaattacc
      601 gccgcgggct acgatgacca aaactatttt ggtcggctca acattagttg atcggcccgc
      661 tgccgtggcg gcctttcctt tcatcgcagg cccgacggag ggatcgacgg aaacgcgcgg
      721 accggtcgag aaacgccggg acttccaatt ggaagatttg acgaatggcg ctatgagacg
      781 ctgagtgcag gcaggcgtgg cccaaggaat ggaacgagta tgagtatgag gtctcgtttc
      841 gtgaacccaa agcgggagca gatacgggtg cggcccgcac atctcacctt tgcggctttg
      901 gtcgcgctga tcgcgacggg ggatcaggtg gacgccgcaa gccgtcgaag cggccgcccg
      961 gtcgagtcca tcacatcgcg caccgccggc gagcccatct tggcgatcgt ttcgctgcgc
     1021 aaccagcagg tcaccgtcta cgatgccaat ggctggatcc tgcgagcgcc ggtgtccagc
     1081 ggccaaaagg ggcgcgagac gcccgcaggc atcttcagca tcatccagaa ggaagcggag
     1141 cactactcga acatgtacga cgatgcctac atgccccaca tgcagcgcat cacctggtcg
     1201 ggcattgcgc tccacggcgg ccccctgccg ggatatccgg catcccatgg ctgcgtccgg
     1261 atgcccttcg acttcgcgga gcgcctgttc gacgcgaccc gactgggcat gcgtgtgatc
     1321 gtggcgccgg gcgatgtggc gcccgttgag atcgctcacc cggctctatt ccgatcaaag
     1381 cgtggtgccg gcgcgttcgc cgccgcccgt gccgcggaag cggacgaggc ggccaggaag
     1441 gcggatgagg caagactcgc cgccgtgaca gcctcgcggg aagccatgcg ggcgacgata
     1501 tcggtgcgtg tggcggaaaa tctgaagctc agagccgaga cgcaattggc ggccgccgag
     1561 actgcgcgcg gcactgcagt ctcggccgag gcaaaggagc gggctgagga cgccaaggcg
     1621 aaggccgttg ccaggatcgc cgacttgcag gcgcaattgg ccctcgccaa ggccgagctg
     1681 caaccgaagc tcgatgctgt cgcgcctgcg cgtgatgccg ccgtcgctgc agagaccgcg
     1741 cggggcgcgg cagccgaggc ggcgcgcgag gcagcgcgcg agctcgagcc ggtatcggtg
     1801 ttcatcagcc gcaagaccca acgtctttat gtccggcggg ccttccaacc gatcctggag
     1861 agtccggtca cgatccggga tcccgatcgc ccgatgggca cgcatgtctt cacggccata
     1921 gagcggatca acggcgacag cgacgtgcga tggagtgtcg tctcattgga cgccgcacgt
     1981 ccacagggcg cagtggtcaa gccgcatggg cggacccgcg ggggtcgtga catcgagccg
     2041 gtgtcgacgg accagggcgg cgcgagcacc gcgctcgacc gaattgtcat tccgcaggac
     2101 gtactggatc gtctcgccgg catggcgtct ccgcaatctt ccctgatcct ctccgacgag
     2161 gcgttgagct cagagaccgg caaaggcacg gatttcgtgg ttgtcctgag cgacgagccg
     2221 caaggcggca tcaagttccg acggcgcgct ccgaggaccg aagtccgtta cgagcgcaca
     2281 cgcaatcgcc tgccttattc gcgctcgcct ttcgcaggtc cgttttcgat ttggtgagcc
     2341 ctgttctttt cgtcgctgct tccctctcgg cggcgtcgat tgaatccgcc tcaaacttca
     2401 cgacttccga ccttcgctac aggtctttct ttgacatttc ggtctgcggt ggggctgaaa
     2461 aattccattc aatcaatgag cagaaacaag ttatattaga caagagattt ttcgatttag
     2521 gaaattcgga cggagcgccg acaggcagtg cagtagctcg ttgatggcct gcaatggccg
     2581 tcaacccggc ggtggcaacc agcaggcagc gtgcggcgcc aatgcttcgc gtgatgttcg
     2641 ctgttggcac tgagcataac tgccggggcc tggcggctat gacagcagtc gaatgaattg
     2701 cggacgagat ttgctcgccg cgaacctttc agccaatgac ccgaagcggc cctccactct
     2761 ctcttcggca aggggacgac tttcctcggc gtgtcacgtc acataccgta acggccgcct
     2821 gagctggagc acggccggac catcccatta gcggacctgg accatgggca gatttcagag
     2881 aaattctggg tcccacacca ggactcgcca gtcaagttac tccattactg gccgttgcgg
     2941 cggttgtcag atcggctctt caaccagcaa aaagaactat tgataaagcc tgctgtttga
     3001 cgtgccgaac cagtctacta cgatcgcgac atccgcaatt gcgataggca tggggaggaa
     3061 gaaatcgcca tgaagatcac attgagtctt gccttgttgg gcgtattgat tttcgcaacc
     3121 gttgctgatg cccaaacgac ggtcctccgc ggggcgcgcg tcatcgatgg aaccggcggg
     3181 cctccgctcg aaaacgccac aatcgttgtc cgggacgaga gcatcgtcgc catcggtccg
     3241 tcggccaaca catcggttcc cgatggagcc gagattgtcg actacgccgg caagtccatc
     3301 atccctggtc tcatctcggc gcactcgcat atcggaatct tcgtcggcct caaggcggcc
     3361 gccgagaact acaatcgcga atctatcctg cggcagttga aacagctcga ggcctatggc
     3421 gtcaccaccg tgatgtcact tggtctcaat gggccgttat tttatgagct gcgtccggaa
     3481 ttgcacgccg gccgcgtacc cggcgcggac ctgttcggag ccgacagcgg catcggggtt
     3541 gtcggcggcc agccttcggc ggcggtcgtg ccagttggcg acaaccaaat cgtccggccc
     3601 gacgggacgg aggcggcgcg tcttgcgatc cgcgagatgg cggcccgaaa agccgatatg
     3661 gtcaagatct ggctggatga tgccggcagg tcgctgccgg ccaaggtcac gccggaagtc
     3721 tattccgcgg tgatcgacga ggcgcacaag aacggcttgc gtgtagccgc ccacatatac
     3781 gacctcgatg atgccaaggc gatcgtgcgt gcaggcgtcg atatcattgc tcacggtgtc
     3841 cgcgacaaac ccgtggacgc cgaattcatc gacatgatga aagcgcgctc gctctggtac
     3901 gtctccacca tcgtgctcga ttacaccaac tacgtattcg ccgagcagcc gccctggatg
     3961 cgcgagccat tcttccagcg ggcgctacat cccgccgtgc gcacgctttt ggatgatccc
     4021 gcctatcgcg agcgcacgct cggactgcct gcggccgcga aaaaccgggc ggcagtcgcg
     4081 accaacaagc agaacctgaa ggcgctccac gatgccggcg ttcaaatcgc gctcggctcc
     4141 gactctggcg tgggcctccg cattc
//
LOCUS       DATILV010000213         4184 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2097634, whole genome shotgun sequence.
ACCESSION   DATILV010000213 DATILV010000000
VERSION     DATILV010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4184
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2097634"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..286)
                     /locus_tag="VLJ17_04940"
     CDS             complement(<1..286)
                     /locus_tag="VLJ17_04940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22358.1"
                     /translation="MPGTVNIYYIWYGPWNTTTDTTQTLLTNFAKHVGGTPYFNINKS
                     YYDATNATVSGAVNFGGATYDLGSQGTVLRSWPGLAQPPRLCFAPNLKARG"
     gene            1231..2181
                     /locus_tag="VLJ17_04945"
     CDS             1231..2181
                     /locus_tag="VLJ17_04945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018429160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSV22359.1"
                     /translation="MGQDENDGIDRRGALECMIWAGTGVLWTMTGGVPRSSSLLGISQ
                     AKAQAASGFTFLQISDSHIGFKAAANPNPMATLDEAIAKIDALPQKPAFMIHTGDITH
                     LSKPEEFDNADQAIGKARLDTFYVPGEHDIIDADLGKAYMERYGKRVQAKGTGWYSFD
                     QNGVHFVGLVNVANLKSGGMGTLGAEQLAWLTDDLKGKSDSTPIVLFAHIPLWTVAEN
                     WGWGTGDAAQALGLVKRFGSVTVLNGHIHQIMQKVEGAVTFHTARSTAFPQPAPGSAP
                     SPGPMRVPDDKLRSVLGITTVAVKRGTQPLAITDSELVKA"
     gene            2280..2612
                     /locus_tag="VLJ17_04950"
     CDS             2280..2612
                     /locus_tag="VLJ17_04950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006613867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin family copper-binding protein"
                     /protein_id="HSV22360.1"
                     /translation="MSLLRDSLRAFAAGAAVCCVCAALAAPGETHLTIDNFTFTPDAI
                     TVPVGTRIVWENNDDIPHSVVETTGKFHSAALDTEDKFSFTFDRVGTFEYFCGLHPHM
                     TGKIVVAP"
     gene            2691..3488
                     /locus_tag="VLJ17_04955"
     CDS             2691..3488
                     /locus_tag="VLJ17_04955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008973828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HSV22361.1"
                     /translation="MGYFRSLSLPGIVAMLAWQAAPAAADECTQPSAPIATDRPDTTN
                     SSVVVPVGSLQNENGINVSRRGGSDIFDGTNTRWRLGIAPCFEVLIDLPNYVGTFRGA
                     GASGFGNVAPAFKWQISPVPGKIDLSVTAGAGLPTGAVAIAGHGVQPYLQFPWSVELG
                     GGWGITGMVTNFFTPDDPINKYANQTTLVLEREFGERSFLFVEYVGDFPVKGGTGQLI
                     NSGGGYRITHTQQIDFHLGFGLNRNSPTYIFGVGYSFRLDGLFNSLR"
     gene            complement(3529..>4184)
                     /locus_tag="VLJ17_04960"
     CDS             complement(3529..>4184)
                     /locus_tag="VLJ17_04960"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV22362.1"
                     /translation="HVGGFMVTALRHLPVHANEYMKLYHAIEERGLVLSFHSATNWGE
                     NVFRGLNRFLSVHALGFPFYNMLHCTNWVVNGLGERFPQLPVIWIEAGLAWIPFLMQR
                     LDHEYMMRPSECPLLRKKPSEYMRDMYYSSQPMEIQDHAAMEQTFRMMDAENHLLYAS
                     DYPHWDFDLPSTIWDLPFLSERAKHNILGGTAARLFKLAPRNGKQRANLLKYGNLTA"
BASE COUNT          849 a         1238 c         1243 g          854 t
ORIGIN      
        1 gaccccgagc tttgaggttc ggagcaaagc acaatcgggg tggctgggcc aagcccggcc
       61 acgacctcag caccgtacct tggctgccca gatcatacgt ggcgccgcca aagttcacgg
      121 cgccggagac cgttgcgttg gtggcgtcgt agtagctctt gttgatattg aagtacggcg
      181 ttccgccgac gtgcttggca aaattggtga gcagcgtttg cgtggtatca gtcgtcgtat
      241 tccagggccc gtaccaaata taatagatat tgacggtgcc cggcatgatc gggccgccat
      301 gatataaaat ggcattggtc gatgtcgacg aaaatcgcgc agcccgccgc tccacctctc
      361 cgctcggatc atgctcgtca attcatcgtc ccgttggcgc gaggtgcaag tcatcgtgac
      421 gacgaatgtc acctgcctcg actaatccgc atggtcccaa ataacctgtg acgaggccca
      481 ccatcatggc caaatgtaat tttttgcctg cgcgcaatgg aaaaaaagcg ctgccgccat
      541 gccgttctcc tgttgtcgcc gccgcccatt ctgtcattgt gtgggagggc gcggcttgag
      601 acggcaacgc ggcataaact tcttagacga aatttgcgac cgatatgtca attcgtcgta
      661 agtccatgat aaatatgagg cgtgatactt atttagacct ctcgacctcg cgtgggcact
      721 ggttatttta ttcaaaagtc gttttgatcg agttgacgct ggattaaatc caatgtttgt
      781 taaatcagag cggattttcg atcgacgggg atcacttgag cagtgagcag aggcgagctc
      841 ttcgcgccgg gtcgatacgg tccggccgtg gcaggcacgc gacgcagtca tcgggccggg
      901 acaaaggctg gacccgttaa ctttgcccat cggcgccttt ccaaatgagg agcgactgtg
      961 cggccacgcg cgcagcgcaa tgcgacccgc agtttcgcgg gtgggcgccg aagagagtgc
     1021 gataagcgca ccgccaaccg caaatcgaca cgcccagcac gtccgctgcc ttgctgatgc
     1081 ctgttttagc ccttcgacca cagggtgagg ttcgtttcgt ttgcaatcac ggcgatgtga
     1141 acaaggctgt ctggtcattg ggaataaatc gcccaatccg gcagtctccc ccgcagtcgg
     1201 cccccttata ggccgcggag gagaatgcaa atgggacagg atgaaaatga cggcatcgac
     1261 cgtcgcggtg cattggaatg catgatctgg gcaggaaccg gcgtgttatg gacgatgaca
     1321 ggcggcgtgc cgcggtcatc atcgttactg ggaatttcac aggccaaggc gcaggctgca
     1381 agcggcttca ccttcctgca gatttccgac agccacatcg gtttcaaagc ggcggcgaac
     1441 cccaatccga tggcaacgct cgacgaagcc atcgccaaga tcgacgcttt gccgcaaaag
     1501 ccagccttca tgatccacac cggggacatc acacatctgt ccaagcccga ggaattcgac
     1561 aacgccgacc aggccattgg caaggcacga ctcgatacct tctatgttcc gggcgagcat
     1621 gacatcatcg atgccgacct cggtaaggcc tacatggagc gttacggcaa gcgggtccag
     1681 gccaagggta cgggctggta ttcgttcgac caaaacggcg tgcacttcgt cggccttgtc
     1741 aatgtggcca acctcaagtc gggcggcatg ggaacgctcg gcgccgagca actcgcgtgg
     1801 cttaccgacg atctgaaagg caaatcggac tcgaccccga tcgtgttgtt tgcccatatc
     1861 ccgctgtgga ctgtggcaga gaactggggc tggggcaccg gtgatgcggc tcaagcactc
     1921 ggcctcgtta agcgcttcgg gtcggtgact gtgctcaacg gccatatcca ccaaatcatg
     1981 cagaaggtgg agggggcggt gaccttccat accgcccgct cgacggcctt cccgcaaccg
     2041 gcacccggct ccgccccgtc gcccggccct atgcgggtgc ctgacgacaa gctgcgctcc
     2101 gtcctcggca tcaccactgt cgcggtaaag cggggcaccc agccccttgc cattacggac
     2161 agcgaactcg tcaaggcgtg atctcctgcg ctcaaatgat cttccctttc cggtgcgccg
     2221 gaaagggacc gcacagttga tcgatcgccg ttccttgcaa caaagaaggc ctctctcata
     2281 tgtccttgct ccgtgatagc ctgcgcgcat tcgccgcggg cgcggcggtg tgttgcgtct
     2341 gcgccgcact cgcagcacct ggcgaaaccc acctcaccat tgacaatttt actttcacgc
     2401 ccgacgccat cacggtcccg gtcggaaccc ggatcgtgtg ggaaaacaat gatgacattc
     2461 cgcattcggt cgtcgagaca acgggtaagt tccactcggc agcactggac accgaggaca
     2521 aattcagctt caccttcgac agggttggta ccttcgaata tttttgcggc cttcatccgc
     2581 acatgacggg caagattgtg gtggcaccgt gaagcggtct ggaagatcgc ggccaaagca
     2641 cctgcgcgtc gtttcgccgg gggtggtgcg cgcgcagcca ggagaagggc atggggtatt
     2701 ttcgatcact gtcgttgccg ggtatcgtcg cgatgcttgc ctggcaggct gcccctgcgg
     2761 cggcggacga atgcacccag ccgagcgcgc ccattgcgac cgaccggccg gacaccacca
     2821 attccagcgt cgtggtgccg gtgggcagcc tccagaacga gaacggcatc aacgtgagcc
     2881 ggcgcggcgg cagcgatatc tttgacggta ccaacacccg gtggcgtctc ggtatcgcgc
     2941 cgtgcttcga ggtgctgatc gatttgccga attatgtggg cacctttcgc ggcgccggcg
     3001 cgtcgggctt cggcaatgtg gcgccggcat tcaaatggca gatcagtccg gtgccgggca
     3061 agatcgatct ctccgtgacg gccggagccg ggctaccgac cggcgctgtg gcgattgcgg
     3121 gccacggcgt gcagccctat ctccagtttc catggtcggt agagctgggc ggcggctggg
     3181 gcatcaccgg catggtgacg aattttttca cgccggacga tccgatcaac aaatacgcta
     3241 atcaaacgac cctcgtgctc gagcgggaat tcggcgaacg atcctttcta ttcgtcgaat
     3301 atgtcggcga ctttcccgtc aagggaggaa ccggccagct catcaattcc ggcggcggct
     3361 accgtatcac ccatacccag cagatcgatt ttcacctagg attcggcctc aaccgcaatt
     3421 cgcccaccta tattttcggc gtgggctatt cattccggtt ggacgggctg ttcaactcgc
     3481 ttcggtaatt cgtcgggggt gagcgacggc gcacgcttgg caccacgctt acgccgtcag
     3541 atttccgtat ttcagcaagt tggccctctg cttgccgtta cgcggcgcca gcttgaacag
     3601 gcgcgccgcg gtcccgccga gaatgttgtg cttggccctc tcggagagga acggcaggtc
     3661 ccagatggtc gatggcagat cgaaatccca atgcgggtag tcggaggcat agagcagatg
     3721 attctccgca tccatcatac ggaaggtctg ctccatggcg gcatgatcct ggatctccat
     3781 tggctgtgag gaatagtaca tgtcgcgcat gtactcgctc ggctttttgc ggagcagcgg
     3841 acattccgag ggccgcatca tgtattcatg atcgagccgc tgcatcagga acgggatcca
     3901 ggcgagcccg gcttcgatcc agatcaccgg caactgagga aagcgctcgc ccaagccatt
     3961 gaccacccaa ttggtgcagt ggagcatatt gtagaaggga aatccgagcg cgtgcacgga
     4021 gaggaagcgg ttgaggcctc gaaagacgtt ctcgccccaa ttggtagccg agtggaacga
     4081 cagcaccaac ccgcgctcct cgatggcgtg gtaaagcttc atgtattcgt tggcatgcac
     4141 gggtaggtgg cgtaacgctg tcaccatgaa gccgcccaca tgcc
//
LOCUS       DATILV010000214         1542 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_306865, whole genome shotgun sequence.
ACCESSION   DATILV010000214 DATILV010000000
VERSION     DATILV010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1542
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_306865"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..519)
                     /locus_tag="VLJ17_04965"
     CDS             complement(<1..519)
                     /locus_tag="VLJ17_04965"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HSV22363.1"
                     /translation="MTQVESLAKYAARASFADLSAESRRQLPIHILDSLACSIAALGA
                     GPVDACRAQVTEFGGTGPSTLIGGGQANPIYAAFWHTALVRYVDFMDNFLAPTETCHT
                     ADNFGVALTIADYVGGSGRDLMLAVALGYTVQSRLVDHANFMSSGFDHTSQLAFSLNA
                     AAGRLLGLSEQQI"
     gene            complement(559..>1542)
                     /locus_tag="VLJ17_04970"
     CDS             complement(559..>1542)
                     /locus_tag="VLJ17_04970"
                     /inference="COORDINATES: protein motif:HMM:NF015509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HSV22364.1"
                     /translation="NTILSALLPMVVTFLLGFVAAWRHDFGSKDAPTLNRMVLLYAVP
                     LALFAGTVTTSRAALGQDIPLVVALCVAIIGFYGVVFLLCRLVFRMQLSNCALAALTA
                     SAPAVPFVGPAVLGDLFGGLSAIPVAIASLVINLTVVPVTILLLALGSTAKDQQENTP
                     VAQDGPHSPSSAKSYASVFAAKLVETVKEPMVWAPILAFIIVLCGFHIPLLIVHAFSL
                     LGQASGGVALFACGIVLASGKIKVNRYILLFVFLKNIMQPALVLGGLRWIGYGNPIAS
                     EAVLTTAIPTMPIVIMLALQYRTAQAEAASAVFLSVMGSVVTMGVFIALTH"
BASE COUNT          363 a          418 c          483 g          278 t
ORIGIN      
        1 gatctgctgc tcgctcagac cgagcagccg gccggcggcg gcgttgagcg agaaggccag
       61 ttgtgaggtg tggtcgaagc cgctgctcat gaagttggca tgatcaacca aacgggattg
      121 caccgtgtag cctaatgcga ccgcgagcat caaatcgcgt ccgctaccgc ccacgtagtc
      181 ggcgatggtc agcgccaccc cgaaattgtc cgccgtgtgg caggtttcgg ttggggccag
      241 gaaattgtcc atgaaatcga cgtagcgcac gagtgcggtg tgccagaacg cagcgtagat
      301 agggtttgct tgtcccccgc cgatcagcgt actgggtccg gtaccgccga actccgtgac
      361 ctgggcgcga catgcgtcga ccgggcccgc gcccagtgca gcgatgctgc aagccagcga
      421 gtctagaata tgaattggta actgcctgcg cgattcggcc gaaaggtcgg cgaaggaagc
      481 gcgggcggca tacttggcga gagattcaac ttgagtcatg atttgtatcc tccgtttcta
      541 gttggtgagt tcatttgttt agtgggttag ggcgatgaaa acccccatcg tgaccaccga
      601 gcccatcacg ctgaggaaca cggcggaggc tgcctccgct tgtgcggtgc ggtactgcag
      661 agccaacata atcacaatcg gcatggtcgg aatggccgtc gtcagaaccg cctcgctggc
      721 aatgggattg ccatagccga tccatcgcaa accacccagg accagggccg gttgcatgat
      781 gtttttcagg aatacgaata acaagatgta ccggttgact ttgattttgc cggatgcaag
      841 cacaatcccg caggcaaaca gggcgacgcc cccggatgct tgccctaaca gcgaaaacgc
      901 gtggacgatg agtagaggaa tgtgaaagcc gcacagcacg ataatgaaag cgagaatggg
      961 tgcccaaacc ataggttctt tgaccgtttc cacgagcttg gcagcgaaaa ccgaggcgta
     1021 agacttggcg gatgatggcg aatgcgggcc gtcctgcgcg acgggagtgt tttcctgttg
     1081 gtctttcgcc gtcgaaccca aagcgagaag cagaatcgtc actggcacga ctgtgaggtt
     1141 gatgacgaga ctggctatgg cgactgggat agcgctgagc cctccgaaca gatcgccaag
     1201 gacggcggga cctacgaaag gcactgctgg cgcggaagcc gtcagcgcgg ccagagcgca
     1261 gttgctgagt tgcatgcgga aaacaagacg gcacaataga aacacgacac cgtagaagcc
     1321 gatgatggcg acgcacaagg caacgaccag cgggatgtcc tgaccgagtg ccgcacgcga
     1381 cgtggtaacc gttccggcaa aaagcgccag cggcacggcg taaagcagca ccatccgatt
     1441 cagggttggg gcatcctttg acccaaaatc gtgtcgccac gccgccacaa aaccgagcag
     1501 gaaggtgacg accattggta ggagtgcgct caaaatcgta tt
//
LOCUS       DATILV010000215         2254 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4140322, whole genome shotgun sequence.
ACCESSION   DATILV010000215 DATILV010000000
VERSION     DATILV010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2254
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4140322"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..219
                     /locus_tag="VLJ17_04975"
     CDS             <1..219
                     /locus_tag="VLJ17_04975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22365.1"
                     /translation="SSPEMNKLAGHLKSKHLYAFSRFNMLWVCPPLIITEDELRQGLD
                     IIEEGLAVVDAALSPASAAQPTEVLARK"
     gene            292..843
                     /locus_tag="VLJ17_04980"
     CDS             292..843
                     /locus_tag="VLJ17_04980"
                     /inference="COORDINATES: protein motif:HMM:NF013918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric reductase-like transmembrane
                     domain-containing protein"
                     /protein_id="HSV22366.1"
                     /translation="MSISVLDICAYVGLVAVGAVAFNMVLGMLMAVRYRPVRSWPHRR
                     FNYFQLHNWSGYVALAAAILHPLILLLNKPTRFRMVDVVYPVRSPSQPLENTVGAVVL
                     YTVAIVVVTSYLRVRLGRRLWKSVHFTIYFAAIAVFWHSLFTDPDLKNSPVQWFDGGK
                     VFIEFCFRQGIKLLSAVHLLQLF"
     gene            1056..1922
                     /locus_tag="VLJ17_04985"
     CDS             1056..1922
                     /locus_tag="VLJ17_04985"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSV22367.1"
                     /translation="MRGFPVILFAMGMGLLMQERKVEPTWLYRDVAALREQQNDLSSE
                     SCHYTAIFGEGDAEPKLPQSVARFGELTVAPHGNCQMVEYPREEELYFVLGGSGMLHY
                     GEQSHSLAQNDFAYVPPTVKHSVSNPSSQALRVVVTTVRIPQDTPLSPPTALTVANLA
                     ELKEETVGGHPNSVLYKLLIGPRTGARDRINATYTVADFFLMDFAPGGTNTPHHHEAA
                     EEIYLVLDGEGQMAAGGGMDGIEGLHHAKAGDAYYFRPNCTVGFYNQKASAAKAHILA
                     VRVFVPMPKNPD"
     gene            complement(1931..>2254)
                     /locus_tag="VLJ17_04990"
     CDS             complement(1931..>2254)
                     /locus_tag="VLJ17_04990"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HSV22368.1"
                     /translation="NGGVYAASTKDQTRQTMRNLLDNLEEADMNFDPVVCTTIYLDNL
                     KELSQFATVHQKYFKGSLPSQTTVQQLAPAERNPDKDDHYPDLEQMSLVAVRGRSSST
                     MRPVP"
BASE COUNT          468 a          572 c          661 g          553 t
ORIGIN      
        1 agtagcccgg agatgaacaa gcttgccggc cacttgaaga gcaagcatct ttatgcgttc
       61 agccggttca atatgttgtg ggtttgcccg ccgttgatca tcaccgagga tgaactgcgc
      121 caaggtctgg acatcattga agaaggatta gccgtggtgg atgcggcgct gtctccggcc
      181 tccgctgccc agccaaccga ggtcctggca cgaaagtaga aacgccagaa gcgctgcgcg
      241 cagcttctcg cttttcttgt gcaagatatc tgatcaattg ggtacacgct agtgagcatc
      301 agcgttctag acatctgtgc gtacgtgggt ctagttgcgg taggggcggt tgccttcaac
      361 atggtgctcg gaatgctcat ggcggttcgt tacaggcctg ttcgcagctg gccgcatcgc
      421 aggttcaact attttcaact gcacaactgg tctgggtatg tggctttagc ggccgcgatt
      481 ctacacccgc tgattcttct gcttaacaag ccaacgcggt ttcgcatggt tgacgtcgtt
      541 tacccggtac gctcgccgag ccagccgctt gaaaacaccg ttggcgcagt cgtgttgtat
      601 acggttgcca tcgtagtagt cacttcctat ttgcgcgtcc ggctaggccg ccgactttgg
      661 aagtcggtgc acttcaccat ctatttcgcg gcgatcgcgg tgttttggca tagccttttc
      721 accgatcccg atctgaaaaa ttcgccggtg cagtggttcg acggtggaaa ggtattcata
      781 gagttttgtt ttcgccaagg gatcaagctg ttgtcggcgg tccatctctt gcaactcttc
      841 tagtgcgtgc tcggccttgc tctgctgaaa tgtgtctcag tcctagcgcg gcatagtgca
      901 aagaagtccc aagatgaacg cgtgggtata gtgttttgtc gcagtattgg aacagggctt
      961 cgggcacata tcaggccagg cggaccccat gagcaaaccc ctggatgtac ggtgctcgtt
     1021 gagggagaat gtgtcgaatt cactggagga cacgcatgcg ggggttccct gtaatccttt
     1081 tcgcgatggg gatggggctg ctcatgcaag agaggaaagt cgagcccacg tggttgtacc
     1141 gcgacgttgc agctcttaga gagcagcaga atgatttgtc cagcgagtcc tgccattaca
     1201 ccgcgatctt tggtgaggga gacgctgagc caaaactgcc gcaaagcgta gcgcgctttg
     1261 gagagttgac agtggcgcca catggcaact gccagatggt cgaatatcca cgggaagaag
     1321 aactgtattt cgttctaggc ggcagcggaa tgcttcacta cggtgagcaa tcgcattcgt
     1381 tggcgcagaa tgatttcgcc tatgtgcctc cgacagtcaa gcacagcgtt tccaatccgt
     1441 cgagccaagc gcttcgtgtg gtggtgacca cagttcgaat ccctcaagac actccactct
     1501 cgcctccgac agcattgaca gtagctaatt tagccgagct caaggaagag actgtcggag
     1561 gtcatccgaa ctccgtgctc tacaaacttc tgatcgggcc gcgtacgggc gcgcgtgacc
     1621 gaattaacgc gacctatact gtggctgatt ttttcctgat ggactttgcg ccgggcggta
     1681 caaatactcc gcaccaccac gaggcggcgg aagagattta tctagtgctg gatggagaag
     1741 ggcaaatggc cgctggcggc gggatggatg gaatcgaggg cttacatcac gccaaggcgg
     1801 gagacgctta ttattttcgg ccgaactgta ccgtcgggtt ctacaatcag aaggcttccg
     1861 cggcgaaggc gcacattctg gctgtgaggg tttttgtgcc gatgcctaag aatcccgatt
     1921 gaggttgaat ctacggcaca ggacgcatcg ttgagctgct tcgtccacgc acggcgacga
     1981 gtgacatttg ctccaaatcg gggtagtggt cgtctttgtc gggattccgt tcggccggcg
     2041 cgagctgctg aactgtcgtt tgtgaaggca acgatccctt gaaatatttt tggtggacag
     2101 tggcaaattg cgacagttcc ttcagattat ccaagtaaat cgtagtgcag accaccggat
     2161 cgaaattcat gtctgcttcc tctagattgt cgaggaggtt gcgcatggtc tggcgggtct
     2221 ggtcctttgt cgaagcggcg tacacacctc cgtt
//
LOCUS       DATILV010000216         6553 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4396405, whole genome shotgun sequence.
ACCESSION   DATILV010000216 DATILV010000000
VERSION     DATILV010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6553)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6553)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6553
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4396405"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..989)
                     /locus_tag="VLJ17_04995"
     CDS             complement(<1..989)
                     /locus_tag="VLJ17_04995"
                     /inference="COORDINATES: protein motif:HMM:NF024994.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HSV22369.1"
                     /translation="MDTKSIATKADVAKSALVPVSRLLRPRSIAIVGISPEPGSFGAT
                     MLSSLKSFDYRGAIHLVSRSRSEAFGQPCAPSIDDLPMDIDLAVLCLPCAGVRDAITA
                     CGRRRIGSAIAFASGFAETGAAGLAEQRAVGETARRAGIALLGPNCLGFINHVDGIAL
                     CMALPEPCRDRNPTVGFIAQSGAMMLAAVEVVRAKGIGYTHVISTGNEAVAGVEDFLA
                     ALIDDEATRVITLFIEQIRRPLLFLELAARARERRKPIVMFHSGRTSASRAAALSHTG
                     ALAGDFRVMAALTAHQGVILVESFDELIDVAALLVRFPDPPTKGVGVISNSGA"
     gene            complement(1018..2013)
                     /locus_tag="VLJ17_05000"
     CDS             complement(1018..2013)
                     /locus_tag="VLJ17_05000"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV22370.1"
                     /translation="MKFVGLRWIQLGIAATFAAIVFLHANGARAAESFPVKPIRVIVT
                     FPPGGSTDLMARIVQPQLEERLSQPIVVDNRPGAGGATGVDAIAKAAPDGYVIGIGAA
                     GALAVNLSLNEKLPYNPFTDLVPISGLAQSPFVLAASLSFPGNSIADVIALAKTAPQS
                     LSIGHGGNGTAMHLTARLFNHWAGLDNTLVPYRGSGPVTQDLMAGHIPLGITDIASSV
                     SQIQARQIKVIGITSRDRFATMPDIPTFAESGLPGYESIGWFGFVAPAGTPPEVVATL
                     NGAIVATLRDPAMRDQIRAMGAEPMPGSPAEFGKFIRSEYEKWARLVAQSGARSR"
     gene            complement(2240..2641)
                     /locus_tag="VLJ17_05005"
     CDS             complement(2240..2641)
                     /locus_tag="VLJ17_05005"
                     /inference="COORDINATES: protein motif:HMM:NF019428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TadE family protein"
                     /protein_id="HSV22371.1"
                     /translation="MMTGIGNIDLARAWDDNYGTSALEFAIVAPVFIALVIGTFFLCM
                     GLFVVASMHFAVEEGARCASINQAVCSNATATIAFAKSRYYGPSGAMPTFTYNAAASC
                     GYSISASINYAADLGLTKVTIPFAVTSCFPQ"
     gene            complement(2793..3347)
                     /locus_tag="VLJ17_05010"
     CDS             complement(2793..3347)
                     /locus_tag="VLJ17_05010"
                     /inference="COORDINATES: protein motif:HMM:NF019428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TadE/TadG family type IV pilus assembly protein"
                     /protein_id="HSV22372.1"
                     /translation="MQQLWRCLTCSEEIALLKADRRGAVAIEFAIFAGLLSVAILNVV
                     DVSIYIFQRMQIENATQMAAQAASNNCGDATKLPAMTNCSALNSAVQIAVSSTSLGTR
                     IALQSGSPSEGYYCVNSSNALQYVSDVSSKPADCGTAGMSSLQPGDYIKITTTFSYAP
                     LFPGITVTKSFATPIVRTAIMRLG"
     gene            complement(3357..4766)
                     /locus_tag="VLJ17_05015"
     CDS             complement(3357..4766)
                     /locus_tag="VLJ17_05015"
                     /inference="COORDINATES: protein motif:HMM:NF024792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein TadG-related protein"
                     /protein_id="HSV22373.1"
                     /translation="MSTIANKISTYREVLARKLTLFHADRSGNVAIMSAFLMVPLVGA
                     LGLGFEVSNWYLTTRAMQNAADAAAISAATNAANGGSNYDVEARAVAAQYGFVNGSHN
                     TTVNVAKVSNTTTCSSGCYSVTIRGTVPLYLSQVIGFKGDTSTTTTTSTTTTDATMNG
                     GGLAGKSLTSSAFATTQMSGATPYCLLALGSSGAAGITTNGAPKANMTGCSVMSNTSA
                     TCNGHNLGATVGAAHATNNGCGINQLSNVAVVKDPYSGLAANIPDNTCSSYAQEPAKN
                     KDPSLPNSNLWSGSKSLSGNVQICGDLQLTGDVTINAPSGAVLVIENGQLDTNGYTLS
                     TSSGSALTVVFSGTNSGSYTHAPTGGGTLNITAPTTGAWKGVAIYQDPNLTSGVDISA
                     AGNSPTWDITGLVYLPHASVTFSGAVNKSSNGQSCFVLVADNVTINGTGSILANGQCA
                     AAGLTMPSGSVPKVQLVSF"
     gene            5537..6400
                     /locus_tag="VLJ17_05020"
     CDS             5537..6400
                     /locus_tag="VLJ17_05020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase electron transfer
                     subunit"
                     /protein_id="HSV22374.1"
                     /translation="MAEVFASAPFVVGKSEPSPTEADIPAEEALCPVISHDWVNDEYK
                     HLVVAASPKALAVKPGQFFNLLCPSPDAGELWLRRPQSVYRIDGARNRIEFLYKCVGR
                     GTRGLATLKKGDMLNMVGPLGIGFHLDPSWRNIAVLGRGVGLATLAPISQLAARYGVG
                     VTAILSARNRDLVMADDLFAKVGTVVPVLDIDRTSDVENVERILRELIAANCADAFFT
                     CGSNRLMQLMKRLAKQHGIPGQVAMEQVMACGLGPCYVCVRTFEVNGRKELRRVCIEG
                     PVFDLQEAVGW"
BASE COUNT         1300 a         1926 c         2002 g         1325 t
ORIGIN      
        1 aacgcgcccg aattgctgat gacccccaca cctttcgtcg gcgggtcagg aaatctgacg
       61 agcaaagctg cgacatcgat caactcgtcg aagctctcga cgagaattac gccctgatgc
      121 gcggtgagtg ccgccatcac ccggaaatcg cccgccagcg cgccggtgtg cgaaagcgcc
      181 gctgcgcggg acgccgaggt gcggccggaa tggaacatca caatgggctt gcggcgttcg
      241 cgcgcccggg cggcaagttc gagaaaaagc agcggccgac gaatttgctc gatgaacagc
      301 gtaatgacgc gggttgcctc gtcgtcgatc agcgccgcga gaaaatcctc gacaccggcg
      361 acggcctcgt tgccggtcga gatgacgtgg gtgtagccga tgcccttggc gcggaccacc
      421 tcgacggccg ccagcatcat ggcgccgctc tgggcgatga acccgacggt cggattgcgg
      481 tcgcggcatg gctcgggcaa cgccatacac agcgcgatgc cgtccacatg gttgatgaag
      541 ccgagacagt tcggccccaa gagcgcaatt ccggcgcggc gtgccgtctc gccgaccgcc
      601 cgttgctccg ccaacccggc cgcaccagtc tccgcgaagc cggatgcaaa tgcgatcgcg
      661 ctgccaatac ggcggcgccc acacgccgtg atagcatcgc gcacgccggc gcacggcagg
      721 cataacactg cgagatcgat gtccatcggc agatcgtcga tcgacggcgc acagggctgc
      781 ccgaacgcct cgctgcggct gcggctgaca aggtgaatgg cgccccggta atcaaaactt
      841 ttcaagctcg acagcatagt ggcaccgaac gaaccgggtt caggtgatat gccgacgatc
      901 gcgatcgacc tcgggcgcag cagccgactg accggcacga gagcagattt cgccacatcg
      961 gccttcgtgg cgatagattt cgtgtccatg ttaggagagc ctgattgcaa ccttgcgtta
     1021 ccgcgatcgc gcgccggact gggccaccaa gcgggcccac ttttcatatt cgctgcggat
     1081 gaatttgcca aattctgccg ggctcccggg catcggctcg gcacccatgg cgcgaatttg
     1141 atcccgcatc gccggatcgc gtagcgtcgc cacgatcgcg ccgtttagcg tggcgacgac
     1201 ctcgggtggt gtgccggcag gagccacaaa cccgaaccag ccgatcgact cgtagcccgg
     1261 caagccggat tccgcgaagg tgggaatgtc cggcattgtg gcaaagcgat cacggcttgt
     1321 tattccgatc accttgattt gccgcgcctg gatctgtgac accgagctcg caatgtcggt
     1381 gatgccgagc ggaatgtgcc ccgccatcaa atcctgcgtt accggcccgc tgccgcgata
     1441 gggaaccagc gtgttgtcga ggccggccca gtgattgaac agtcgcgctg tcagatgcat
     1501 ggcggtgcca ttgccgccgt ggccgatcga aaggctttgc ggcgctgtct ttgcgagcgc
     1561 aatcacgtcc gcaatcgagt tgcccggaaa cgataacgat gcggccagca cgaacggcga
     1621 ctgcgcgagg ccgctgatcg gcacgaggtc ggtgaaggga ttgtacggca gcttctcgtt
     1681 gaggctgaga ttgacggcga gggcgccggc cgccccgatg ccgatcacgt aaccgtccgg
     1741 cgccgccttt gcgatggcat cgactccggt ggctccgccc gctcccggcc gattgtcgac
     1801 aacgatgggc tggctcagtc gctcttccaa ctgcggctgc acgatgcgcg ccatgagatc
     1861 ggtcgagccg cccggcggaa atgtcacgat gacgcggatc ggcttgaccg gaaaggactc
     1921 ggcggcgcga gcgccattcg cgtgaagaaa aacgatggcg gcgaatgtgg ccgcaatgcc
     1981 cagctgtatc cagcgcagcc caacgaactt cattgaggaa cctcgaactg aggctgaaat
     2041 ctaaacgcag cccggtgcga gcgcgagcga aatcacttta tcggtcagtt tcccgcgcct
     2101 cggggatgcg gggcaacggc aagacatcga accggaaggc tgcgccagaa ggacaaccag
     2161 attcgcaaaa taggataatt cacgcggcta taccattcgg cagccaataa ccacaaaggt
     2221 gcgtgcggcc ggtggagatc tattgaggga agcacgaggt gaccgcgaac ggaatggtta
     2281 ccttggtgag gcccaaatct gccgcgtagt tgatcgacgc gcttatcgaa tacccgcagg
     2341 aggcggccgc gttataggtg aaggtcggca ttgcgccgct aggcccataa tagcggcttt
     2401 ttgcaaaagc tatggttgcg gttgcattgc tgcagacggc ttgattgatc gaggcgcaac
     2461 gcgcgccttc ttcgacggcg aaatgcatac ttgcgaccac gaacagaccc atgcagagaa
     2521 agaacgttcc gattacgagg gcgatgaaaa ccggcgccac tatggcgaat tccaaggcac
     2581 tggtgccgta attgtcatcc cacgctctcg cgagatcgat gttaccgatc cccgtcatca
     2641 tcccgatcgt gccttgcttg ttgatgtcca gcaagcaaga cgtggatgcc tgcgaagacg
     2701 ggatcccggc cgcgcgacgc gacggggtgt ctctgcgcgg gcatgacggt gcgcaggtga
     2761 ttcgacccga tcggagtgcg cggtagacat cgtcacccca atctcattat tgcggttcgc
     2821 acgatcgggg tcgcgaagct tttggtgacc gtgatgccgg gaaaaagtgg cgcataggaa
     2881 aacgtcgttg tgattttgat ataatcgccg ggctgcaggc tcgacattcc ggcggtcccg
     2941 cagtccgccg gcttgctgct aacgtcgctc acatattgca gcgcgttcga tgagttgacg
     3001 cagtagtatc cttctgacgg tgaaccggat tgcagagcga tgcgcgttcc cagcgaagtg
     3061 ctcgaaaccg caatctgcac ggcgctgttc aacgccgagc aattcgtcat cgctggaagt
     3121 ttggtcgcat cgccgcaatt gttcgaggct gcctgcgcgg ccatttgcgt tgcgttttcg
     3181 atctgcatac gttggaagat gtatattgag acatcgacga cattgagaat tgcaacggac
     3241 aggaggcccg caaaaatcgc aaattcaatt gcgactgcgc cccgccggtc cgccttgagg
     3301 agcgcgatct cctcgctgca cgtcaggcat ctccacaatt gctgcatctt ggcgcctcaa
     3361 aaagaaacca gctgaacttt gggcaccgat ccgctgggca tcgtcaatcc agccgctgcg
     3421 cactggccgt tggccagaat actgcctgtg ccattgatcg tgacattgtc cgccaccagc
     3481 acgaagcaag actgcccgtt gctcgacttg ttgacggcgc cgctgaaagt gacgctcgca
     3541 tgcggcagat agaccaggcc ggttatgtcc caggtcggac tgtttccggc cgccgagata
     3601 tcaactcccg aggtcaggtt cggatcctga tagatggcga cgcccttcca ggcgcctgtg
     3661 gtcggcgccg taatgttcag cgtgccgccg ccggtcggcg catgcgtata cgatcccgaa
     3721 ttcgtgccac taaacaccac tgtgagcgca gaaccactgg atgtgctcag ggtgtatccg
     3781 ttggtgtcga gttgtccgtt ttcgatgacg aggacagcac cggacggcgc attgatggtg
     3841 acgtcgccgg tcagctgcag gtccccgcag atctgcacat tgccgcttag gcttttagat
     3901 cccgaccaca gattgctgtt gggcagcgac gggtctttgt tcttggcagg ctcttgcgca
     3961 tatgaactgc aggtattgtc ggggatattg gctgctaagc ccgaataagg atccttgacg
     4021 accgctacat tggaaagctg gttgatgcca cagccgttgt tcgttgcgtg agcagcgccg
     4081 acagtagcgc ctaggttatg gccattgcag gtggccgacg tattggacat gacactgcag
     4141 ccagtcatgt tggctttcgg tgccccgttg gtggtgatac cggcggcgcc gctgctgccg
     4201 agggccaaca ggcaatacgg cgttgcgccc gacatctgtg ttgtggcaaa tgccgagctt
     4261 gtcaacgact tgccggcaag accaccaccg ttcatggtgg catcagtggt ggtggtcgat
     4321 gtagtggtcg tggtactggt gtcacccttg aatccgatca cttgggacaa atacagcggt
     4381 acggtgcctc taatcgtgac gctgtagcaa cctgacgagc aagtcgtggt gtttgagacc
     4441 ttcgcgacgt tcaccgtggt gttgtggctg ccattgacaa acccgtactg ggccgccact
     4501 gccctggctt caacatcgta gttggagccg ccgttggccg cattggtggc cgcggaaatc
     4561 gccgccgcat ctgcggcatt ctgcatggcg cgtgtcgtca ggtaccagtt tgaaacctca
     4621 aatccaagcc ccaaagcgcc gaccagcgga accatgagaa acgcgctcat gatggccaca
     4681 ttgccgctac gatccgcgtg aaacagagtg agcttgcggg cgagtacctc tcgataggtc
     4741 gaaattttat tggcaatcgt cgacatagcc atacctacct ttggccgcgt tgagagcttc
     4801 tctcatgggc aaatcgcctg gttatcaata aaaacattta aaaaacccat ccgactaatg
     4861 ggtggtattg tattcaattt ttccgcgatg tgttttgcgt ctgggggtct tgaatttgat
     4921 gaccggcacg accttgcttc gcgctaatgc atcctggcgc ttcaattggt gacgccatcg
     4981 caacttgaat atcgttggca atcgttaatg tggcgttata tgcgattacg atcgcggtga
     5041 tgatccggtc tggagactat ccggttcagc caccagagtt gctatctctg cgtcgtacag
     5101 ccaggcgctt tctggcagga gccacacgga tgacgacgac cagcgcggct tcgccttcga
     5161 gcgacgaggc gtatcgtttc ccaaaacacg gccggcagct cggattgagc cttaagcgcg
     5221 attaggcgcg tcttcggatg cgcttttggc gaaatccgga ccgcccatca atgcggcgat
     5281 gccggtcccg ggcttcgcgt agcgcaatcc aggtttctgc cgcagaccga cgattctgcc
     5341 ctctttcaaa aaccttgacg catttgcgcc gagtctcgtt cgttaagcga agcgacctga
     5401 cgcgcccgcg tgaaccggct ttcttagaag cggtccgggc gtgttcacaa tggggaacta
     5461 ttattgattt tggcccgatc ggggtatagt tcggagccat gaagttcgaa caggtaaggg
     5521 gcaaggtcga agtgtgatgg ctgaagtctt cgcgtcagcg ccgttcgtcg tcggcaaaag
     5581 cgagccgtct ccgaccgaag ccgatattcc ggctgaggag gccctgtgcc cagtgatctc
     5641 acacgattgg gtcaatgacg aatacaagca tcttgtggtc gcagcgtccc caaaggcgct
     5701 tgccgtcaaa ccgggccagt ttttcaacct cctgtgtccc tcgccagacg cgggcgagtt
     5761 atggctacgg cggccgcaaa gcgtctatcg catcgatggc gcacgcaacc gcatcgagtt
     5821 tctctacaag tgcgtcggcc gtggcaccag gggcctggcg accctgaaaa aaggcgacat
     5881 gctcaacatg gtcggcccgc tcggcatcgg attccatctc gatccatcgt ggcgcaacat
     5941 cgcggtgttg ggccgcggcg tcggcctcgc caccctggcc ccgatctcgc agcttgccgc
     6001 ccgttacggc gtcggcgtca ccgcaattct gtcggcgcgc aatcgtgatc tcgtcatggc
     6061 ggacgacctg ttcgcgaaag tcggaaccgt ggttccggtg ctcgatattg accgcaccag
     6121 cgatgttgag aatgttgagc gtatccttcg cgagttgatc gcggccaatt gcgccgacgc
     6181 tttcttcacc tgcggctcca atcggctgat gcagttgatg aagcggctcg ccaagcagca
     6241 cggcattccg ggtcaggtcg caatggagca ggtcatggcg tgcgggctcg ggccctgtta
     6301 cgtctgcgtg cgcaccttcg aggtcaacgg tcgcaaggag ctgcgccgcg tctgcatcga
     6361 agggcctgtg ttcgatctcc aggaggcggt cggatggtag acatgacggt gagggtcggg
     6421 aacgtcaccc tgaaaaaccc gatcatgccg gcgtccggcg ccttttccac cgatctcgcg
     6481 caggtgatgg acgtcaaccg gctcggcgcc ctggtggcga aaaccgtatc gcgcgaattt
     6541 cgcatcggca acc
//
LOCUS       DATILV010000217         2657 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3631070, whole genome shotgun sequence.
ACCESSION   DATILV010000217 DATILV010000000
VERSION     DATILV010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2657)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2657)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2657
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3631070"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..546)
                     /locus_tag="VLJ17_05025"
     CDS             complement(<1..546)
                     /locus_tag="VLJ17_05025"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSV22375.1"
                     /translation="MMTIHANKVQNLTTSADLKQRAELMAAAAAAAADNVDQEARFPS
                     EAFSVAKTHRLLGIQVPIELGGEGASVSDVADLCYLLGRACASTAMVFAMHQIMVTIL
                     VRHAPNSAWHRRMLRRLCAEQLLLASSTTEGQGGGDLRSSVCAVESAGAGITVAKSAT
                     VMSYGAEADGVVTTARRAPDAA"
     gene            1108..1371
                     /locus_tag="VLJ17_05030"
     CDS             1108..1371
                     /locus_tag="VLJ17_05030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017483500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopantetheine-binding protein"
                     /protein_id="HSV22376.1"
                     /translation="MLDHHTPTDRVTALVNRMLTERSLKFPACPDDDLRSIGLSSLDM
                     VNLVLSVEAEFDVSIPDADITPSKFRSISTIATLVTALVCEVN"
     gene            1651..2586
                     /locus_tag="VLJ17_05035"
     CDS             1651..2586
                     /locus_tag="VLJ17_05035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV22377.1"
                     /translation="MPLDPHAKRLLDMVAAGKTDISRLSPEAMRQAIDKLAQLLDVKN
                     VSIGAIENRQIPGPVCGLPVRIYTPVVETSGRLPALIYFHGGTGVFCSIETHDGLCRM
                     LANGSGCRVFSVGYRLAPEHKFPAAIEDSYAAAEWILAHNEELEIDPKRTAVGGDSAG
                     ATLATAVCQLAKQAGGPEFALQVLICPVTDLLRDSASRRSFSEGYFFDMATLDWALQH
                     YLTADADRSDSRLSPLRAVDLRALPAAHIHTAEFDPFRDDGKAYADALEGAGVPVIYT
                     CHEGLIHHFYCMSGAIPRGRVVVKGIGNSVKAALV"
BASE COUNT          526 a          792 c          763 g          576 t
ORIGIN      
        1 cgctgcgtcc ggcgcccgtc gtgccgtggt cacgacacca tctgcttctg ccccgtagga
       61 cattacggtg gcgctcttcg ccaccgtaat gccggccccg gcgctttcca ctgcgcagac
      121 gctggaacga aggtcgccgc cgccttggcc ttccgtcgtt gacgaggcga gaagcaattg
      181 ctccgcgcaa aggcgacgga gcatccgcct gtgccatgcg ctgttaggag catgtcgcac
      241 caggatcgtt accatgatct ggtgcattgc aaagaccatc gcagtcgaag cgcaggcacg
      301 cccgagcaaa tagcacaggt cggcgacgtc ggagacgctg gcgccttccc cgccaagttc
      361 gatcgggact tgaattccga gcaagcggtg cgtcttcgcg acagaaaacg cctcggatgg
      421 aaacctcgcc tcctggtcga cgttgtcggc agcggcagcc gccgcagctg ccatcaactc
      481 ggctcgctgc ttgagatctg cggaagtagt gagattctgc accttgttgg catgaatggt
      541 catcatgttc gcttactcgg ctcgtgacta catgaacagc acaggattgt gcatgccttc
      601 ccaaacatca gcccacccag cgcgcccgca aaggcgcttt aacgcgcaat ttcccgaacg
      661 ccagccggtg gccccgaggt cacacgcgct tcccccggac gttccggtgc ggcaccgcaa
      721 tgtacacctt tgagataaca caacgtgttt gtggcatcaa gaattaacga tatgaggtta
      781 tcattgtgtg gcgattaata ctaattgcgc catcgctcaa tgacgtgcca gccgtctgtg
      841 cggcaggtcg gccgagccgg tcattcagga cgatgcggtt ggcaaaaatg ccttaataat
      901 cagatagata tgtgaatttc gccggtacga gtgcagcggc tgcaaggcac ttgaaatcgc
      961 gattatggca gtggcgctac catctgcgca cttccttgca taacaaagta ccagcctaag
     1021 cggttgctgt ctgataatat ttcatgttaa gtcgttgcct ggatgcaacc gtgccgcgcc
     1081 agcggtacta cgtcggacag cgccgaaatg cttgatcatc acacgccaac ggacagggtc
     1141 accgcactgg tcaatcgcat gctgacggag cgatcgctga agtttcctgc gtgccccgac
     1201 gacgacctgc gttctatcgg actcagttcg ctggatatgg tcaatctcgt gctctccgta
     1261 gaggctgagt tcgatgtgag cattccggac gcagacatta ccccatctaa gttccgatcg
     1321 atttcgacga ttgccacgtt ggtcacagcg ttggtgtgcg aagtcaattg aggcgaccgt
     1381 cggcgagtgt ttattgccca gggcgatcat taaggcatcc gttactgtcg gagaataaga
     1441 cagccttcga ttcggcacgg ctgaccgcgg gcacctgcgt ttggtctcca caatgtcgat
     1501 tgtgctgacg aaatctgctg aacgccgcag ctgcgtgcga ggcgcccttg gtgtcgggac
     1561 ccaaatttaa tgccgcaact tccggaccca agtttgacgg ccggtgcccc tacgcgccgc
     1621 caccgttgac tattggtcag aaacatcatc atgccgctcg atcctcacgc taaaagactg
     1681 ctcgatatgg tggcggctgg gaaaaccgac atatcacggc tttcaccgga ggccatgcgt
     1741 caggcgatcg acaagctcgc gcaactcctc gacgtcaaga atgtctcgat tggggctatc
     1801 gaaaatcgcc aaatcccagg gccggtatgc gggcttccgg tccgcatcta tacccccgtc
     1861 gtggagacga gcggcaggtt acccgccctg atctattttc acggtgggac cggcgtcttt
     1921 tgcagcatcg aaacccacga cgggctttgt cgcatgctcg ccaacgggag cggctgtcgg
     1981 gtgttttcgg tcggctatcg gctcgcgccc gaacacaagt ttccggctgc catcgaggat
     2041 agctacgcgg cggccgaatg gatccttgcc cataacgaag aactggagat cgatccaaaa
     2101 cgtaccgcag tcggggggga ttctgccgga gccaccctcg caactgctgt ctgccagctc
     2161 gcaaagcagg cgggcggccc cgaattcgcg ctgcaggttt tgatttgtcc ggtgaccgat
     2221 ctcttgcggg attctgcgtc gcgtcggtca ttttcagaag gctatttctt tgacatggcg
     2281 acgttggatt gggcgctgca gcactacctc actgcggatg cggaccgatc ggattcacgc
     2341 ttgtcgccgc ttcgtgcggt tgatcttcgc gcgcttccgg ccgcccacat tcacaccgct
     2401 gaattcgatc ccttccgtga cgacggcaag gcttacgctg acgcactcga gggcgccggt
     2461 gtgcccgtca tttatacgtg ccacgaaggc ctgatccatc atttctattg tatgtccggc
     2521 gcgatccccc gtgggcgcgt cgtcgttaaa ggcatcggaa attcggtcaa ggcagcgctc
     2581 gtgtagcgtc tgtgtcccgg agcgtgaaac gacgccggca atgagcgcca ggtcggcgat
     2641 cgattgcagt cattcgc
//
LOCUS       DATILV010000218         3026 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_307636, whole genome shotgun sequence.
ACCESSION   DATILV010000218 DATILV010000000
VERSION     DATILV010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3026
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_307636"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(61..345)
                     /locus_tag="VLJ17_05040"
     CDS             complement(61..345)
                     /locus_tag="VLJ17_05040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22378.1"
                     /translation="MSRFLLLADGRRLETLADARQLILSLPARDQAQERWQRAAAMLM
                     TAATTGRRDHIVVATGMIERAVTEPTQGAVSEKKPPARSIRRRTGGKKRA"
     gene            761..979
                     /locus_tag="VLJ17_05045"
     CDS             761..979
                     /locus_tag="VLJ17_05045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22379.1"
                     /translation="MHDPLTRAARYWERAVECLRLADASSRDDLKAEYRRLAEHYATL
                     AEGEQKIAAYLKRIATNGRGTKRTRGPR"
     gene            complement(1725..1997)
                     /locus_tag="VLJ17_05050"
     CDS             complement(1725..1997)
                     /locus_tag="VLJ17_05050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22380.1"
                     /translation="MIKPILSSIIDKATARSGGFGVPSAAPAVCRRVETKQRWRESIK
                     NQVVGLFPTPNHAARERLLGHNLIGHLVNEIAKPSSVANAKSDRRY"
     gene            2241..2447
                     /locus_tag="VLJ17_05055"
     CDS             2241..2447
                     /locus_tag="VLJ17_05055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22381.1"
                     /translation="MATMMTRCPNTGRAVSTGVSTSSVKFDTLPDVGVRMHCPACGRD
                     HVWRKREAWLGHDGESTRANESAA"
     gene            complement(2842..>3026)
                     /locus_tag="VLJ17_05060"
     CDS             complement(2842..>3026)
                     /locus_tag="VLJ17_05060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22382.1"
                     /translation="DAAHLGNRTSEVEQIAIEGFCRLLGHVHVSLRRGHWWCDPKPMV
                     SICSGMSPRSFNALAD"
BASE COUNT          583 a          907 c          938 g          598 t
ORIGIN      
        1 attcgttcag ttggtcgtat ttctgcagaa aaccggttac ccacttttcc ggaaaatgct
       61 ttaggcgcgt ttcttgccgc cggtccgtcg tctgatcgat cgcgctggcg gcttcttctc
      121 cgagaccgcg ccctgcgtcg gctcagtgac tgcacgctcg atcatgccgg tggcgacaac
      181 gatatgatcg cgccggcccg tggtcgcggc ggtcatcagc atcgccgcgg cgcgttgcca
      241 tcgctcctgc gcctggtcgc gggccggtag cgacaggatc agttgccgcg catcggcgag
      301 ggtttccagg cggcgaccat ctgccaacag gaggaacctg ctcaagctcg cgtaccacat
      361 gctcagatgc cataagcagc ggccgacgat cgaagtgtac gcccgaccgt ccgccaggcg
      421 ctcggagtgg ggggcattgg gggactggct ccgagcgccg cgacttgagc gtacgcgcat
      481 tcttggggtt ggtacaagtc ggctcaggag gcgcatgacg ccgggccgac actccaattt
      541 cgcgagcacg tgaacggttc gtctgttgtg agtgcgactc gtcgcccgtg gttcctcggg
      601 cacgagttca tccgcggccc cgcggccgtg gtgcaccgca agaggcttcc cgacgcccct
      661 gtgcgaatcg cctaccctgt agtcggtacg ggaattgcca tctgctgtcc ccgcctagat
      721 attccgcact ttgaaggatg cgtagtgaag ggtgcgtagc gtgcatgatc ccttgacgag
      781 agcggcccgg tactgggagc gtgcggtcga atgcctgcga ctcgcagacg cctcgagccg
      841 agatgatctc aaggccgagt accgccggtt ggcagagcac tacgcgacgc ttgcagaggg
      901 cgaacaaaag atcgccgcgt acctcaagcg cattgccacc aacgggcggg gcacaaagcg
      961 cacgcgcggg ccgcgatgag ccctggttcc cggtgcgtta ccgaaacgtc acggggttgc
     1021 gccgatctgt gatctgtttg gttattgcgg aatgcctgcg gctcgctaac gcgtccgtcg
     1081 aaacgatctc aaggtcgggt actttgacat ggccaagcac tacgcggcgc gtggtgaggg
     1141 cgagcagaag atcgacgtga gcctcaagcg cattgcagcg gccgaggagc cgcccgcaaa
     1201 aaacgggccg cgttgagcct gcgggctatt gccgcaacga ccgatcgaaa tcgatgtaac
     1261 gataaatcga tataacgatg ttgtgcactc tgcggccttt gggattacct cctggtgcgc
     1321 ctagaataaa ccgccgggcc ccggagctga atgccctccg tccagggtgc ccgctggggc
     1381 acagtgttct gaaacgcgtt agcagcccag tggcggacgg ccctttgcgc ccgaccgtcc
     1441 gccggatgac tcagagtgct gtggggtgct tctccgagtc atcgggatca gcgctacggc
     1501 accactttat cgcaattgtg gaagcgccag cattgtttgc cgaaagggtt aaccccggta
     1561 gtgcgacctc gacgatgtgc gggaagtcgc gttcgttgag gcgggcggtg ttcgcctttg
     1621 cgacgcgtca ttggcgcttg ccatcaagca actcgctatg gagttgaatc gatgctgttg
     1681 gtgctcggcc ggcgaaacga cccttttggc tcatgatctc ggtattagta gcgccggtcc
     1741 gattttgcat tcgcgaccga gctcggtttc gcgatttcat tgacgagatg gccgatcagg
     1801 ttgtgaccga ggagccgttc tcgagccgca tgattggggg tcggaaacaa tcccacgact
     1861 tggttcttga tcgattcgcg ccatcgctgc ttcgtttcca cgcgccggca tactgctgga
     1921 gccgcgctgg gcacaccaaa cccgccggac cttgccgttg ccttgtcaat gatcgatgac
     1981 aggatcggct tgatcatttt cccgaaaaag cgcccccgga cttcatcctg gacttcatcc
     2041 gggggtggac accggctttc cgaaagaaaa tgcgagaaga agaggcggcg gctcattgca
     2101 cgttggagta tgtctaaagg tgacaagcgg ccgtacgccg cggcacttgt ccacaggtgc
     2161 caattattgc ggattgactc tggacgaggc ggcgacgttg agtcgatctc ggatgcatgg
     2221 cgactgattg gagaccgccc atggccacca tgatgacccg gtgccccaac acggggcgtg
     2281 cagtctcgac gggagtcagc acctcgtccg tcaaattcga caccctgccg gatgtcggcg
     2341 tgcgcatgca ttgccccgcg tgtggtcgcg atcacgtctg gcgaaagcgc gaagcctggc
     2401 tgggtcatga cggcgagtcc acgcgagcga acgaaagcgc cgcatagcct ttccggcccg
     2461 ctcgcgcagc agggccacct cagagcacat ttagtttcgc cggaaacggc accttggttt
     2521 cgtcgcattt tcggacggcc cgctgcgcaa agcgctagcg cggcgagaaa accggattcc
     2581 accccggatc aagtccggcg ctcgtgaaaa tgctcttgct tcgcatatga ccttcgcgcg
     2641 aaacgcgaaa aggtctgcac tcatttcata ccggctgcga attgtcatcg aactgtctca
     2701 cgactcgatg agtatcgcct gagtacgcgt gatcgcaaca cgacccgatc gcagcgcttc
     2761 agcaacaacc tgacatatgc aatcgcggcg acgtaccagc ggcctgaccc caacatttgg
     2821 cttgccagat gttagggcaa gtcagtccgc caacgcattg aagctgcggg gcgacatacc
     2881 cgaacagatg gaaaccatag gtttggggtc gcaccaccag tggccgcgcc gtagggacac
     2941 gtgaacatgc ccgagcaaac gacaaaagcc ttcgatagca atctgctcga cctcagacgt
     3001 acgattgccg agatgggcgg catcgc
//
LOCUS       DATILV010000219         5170 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4141059, whole genome shotgun sequence.
ACCESSION   DATILV010000219 DATILV010000000
VERSION     DATILV010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5170
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4141059"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..931)
                     /gene="pyk"
                     /locus_tag="VLJ17_05065"
     CDS             complement(<1..931)
                     /gene="pyk"
                     /locus_tag="VLJ17_05065"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HSV22383.1"
                     /translation="MRRQRRTKIVATLGPASSQRSVMEALFAAGADVFRINMSHTTHD
                     RMRELVRFIRDIEREHGRPIAALVDLQGPKLRIGTFKDDAVALAASANFVLDADPAPG
                     DHDRVYLPHPEILTALKPGHRLLLDDGKIRLLVLETSPNRAVTQVEVGGKLSARKGVS
                     VPNTVLGFSALTGKDHSDLEAALDAGTDWIALSFVQRPEDIAEAKKIARGRAAVMAKM
                     EKPQAVEHLAEIIDAADGLMVARGDLGVELPVEKVPALQKQMTRAARRAGKPVVVATQ
                     MLESMIVSPVPTRAEVSDVATAIYEGADAVMLSA"
     gene            complement(928..1401)
                     /locus_tag="VLJ17_05070"
     CDS             complement(928..1401)
                     /locus_tag="VLJ17_05070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011924334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1036 domain-containing protein"
                     /protein_id="HSV22384.1"
                     /translation="MLALMATRAAADFRICNITKSRVGIALGYKDGEGWATEGWWNLT
                     AGNCETVLRGNLAARFYYIYAVDYDRGGEWSGQAFMCTRDKEFTIRGTGDCLARGFDR
                     TGFFEVDTGEQQTWTVQLTEAGETARQQGAPGKTPVPAPGARSLQSLPSAGSSAR"
     gene            complement(1512..2801)
                     /locus_tag="VLJ17_05075"
     CDS             complement(1512..2801)
                     /locus_tag="VLJ17_05075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HSV22385.1"
                     /translation="MHSLRTFLDELYRIAVAAAHPASCLVPRLPDPPAAGRLIILAAG
                     KAAGSMTEIAERHYLDDLRLSSSRLVGAAVTRRGYGRPTRIVTVTEAGHPVPDDASLA
                     AAERALSLAEGATADDLVLVLLSGGASANWIAPSVGLTLAEKQAVNRALLRSGATISE
                     INAVRKHLSRIKGGRLGRLAYPARMVTLAVSDVSGDDPAVIGSGPSVPDPTTLADARA
                     VMARFRLDISPAIGRALADPANETPKPQDPAFDRTAFRLIARPKEAFRAAEAAIRAHG
                     YECKFLGDRIEGEARDVAVAQARLAKSMRARGQRGVIVSGGELTVTIRGKGRGGPNQE
                     YALALAQALQGTPGIAAIAGDTDGTDGGAGSPNDPAGAFIDDTTLARAKKLGLDPAAF
                     LAENDSTGFFERLGDLLQPGPTYTNVNDFRAIFVDPQ"
     gene            2954..3256
                     /locus_tag="VLJ17_05080"
     CDS             2954..3256
                     /locus_tag="VLJ17_05080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1244 domain-containing protein"
                     /protein_id="HSV22386.1"
                     /translation="MDIDEKTRVELEAAVYRRLVEHLRQRTDVQNIDLMNLAGFCRNC
                     LSNWMKDAADAKGFSMTKDMSREIVYGMPYDEWRAKHQREASNEQKAEFEKTQHKH"
     gene            3384..3674
                     /locus_tag="VLJ17_05085"
     CDS             3384..3674
                     /locus_tag="VLJ17_05085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2312 domain-containing protein"
                     /protein_id="HSV22387.1"
                     /translation="MSAVTAATAIKDKPKEGTSTRFAKDQLKAIVERIEHLEEEKKAI
                     SDDIRDVYAEAKGNGYDVKALRTVIRLRKQDKDERAEQEAILETYLHALGMI"
     gene            complement(3681..>5170)
                     /locus_tag="VLJ17_05090"
     CDS             complement(3681..>5170)
                     /locus_tag="VLJ17_05090"
                     /inference="COORDINATES: protein motif:HMM:NF017736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF882 domain-containing protein"
                     /protein_id="HSV22388.1"
                     /translation="TDEDITITYKRDGRYDDEALKRLDRFVRDWRKEEDIHMDPRLFD
                     VIWEVSREVGGDKTIHVVCGYRSPSTNAMLRRRSSGVAQFSQHTLGKAMDFYIPGASL
                     EELREAGLRLQRGGVGYYPSSGSPFVHLDVGSVRHWPRMTHDQLARVFPNGRTVHVPS
                     DGHPLSGYALALADIEKRGSSVPSQMSLSAAQAAGVDTGAAQGTRKKSLLATLFHLDD
                     DEDNDSAHAAPGVTTSTGPASRAGSFSLASVDSKPVRSVSVPVPPARPQRSAATSALV
                     AYAGNDSAVMPGPAGGDQWALGLTDSPPAPVQPIPRAPMSHPDTAGSLMPWPIREADN
                     DRVPLDMVLAYATQPPHGGDVSAAHAEQPMEQGPIRAAAPALAPREPISTVPKKSFAR
                     TTVAGSIARAKLVVQAAKPGMRYDDPWLRAMILAPRLSDSMTATLYGEPDFTELRALM
                     NKPTTSVAMSFANDPYPGITTDSFSGEAVVFLTTYAFPQRTAWLQ"
BASE COUNT         1048 a         1579 c         1599 g          944 t
ORIGIN      
        1 ccgccgacag cattacggca tctgcgccct cgtagatcgc ggtggcgacg tcggatactt
       61 cagcgcgcgt gggcaccggg ctaacaatca tcgattccag catctgagtt gccaccacta
      121 cgggcttgcc ggcgcgccgt gcggcccgcg tcatctgttt ctgcaaggcc gggactttct
      181 ccaccggcaa ctcgacacca agatcgccgc gcgccaccat caagccgtca gctgcatcga
      241 taatttcagc gaggtgctca acggcctgcg gcttctccat cttcgccatc acggcggcgc
      301 gtccacgagc gatcttcttg gcttccgcaa tatcctcggg gcgctgaacg aaagacaacg
      361 caatccaatc ggtgccggca tcgagcgcgg cctcgaggtc ggaatgatcc ttgccggtca
      421 gggctgaaaa ccccagcacc gtattgggaa cactgacacc cttgcgagcc gatagcttgc
      481 ccccaacttc gacctgcgtg accgcgcgat tcggcgaggt ttccagtacc agaagcctga
      541 tcttgccgtc gtcgagtagc agcctatggc ctggcttgag ggctgtgagg atttccggat
      601 gtggaagata gacccgatcg tgatcccccg gcgccggatc ggcgtcgagc acgaagtttg
      661 cactcgccgc tagggcgacg gcatcgtctt tgaacgtgcc aatgcgcagt ttcggtccct
      721 gcagatcgac aagcgccgcg atcggtcggc cgtgctcccg ctcgatgtcg cggatgaagc
      781 gcacaagctc gcgcatgcga tcgtgcgtgg tatggctcat gttgatgcgg aacacatcag
      841 cgcccgcagc aaacagagcc tccatgacgg aacgttgaga agacgctggc ccaagagtcg
      901 cgacaatttt ggtgcgacgc tgccgcctca tcgtgcggaa cttccagctg aaggcagcga
      961 ttgtaacgag cgcgcgccgg gcgccggcac cggcgttttg ccgggcgcgc cctgctgccg
     1021 ggccgtttcg ccggcctcgg tcaactgcac ggtccaggtc tgctgttcac cggtgtcgac
     1081 ttcgaaaaag ccggttcggt cgaaaccgcg cgcgaggcag tctccggttc ctcggatggt
     1141 gaactccttg tcgcgcgtac acatgaaagc ttggcccgac cattcgccgc cacggtcata
     1201 atcgaccgca tagatgtagt agaagcgcgc cgcgagattg ccgcgaagta ccgtttcgca
     1261 gttgcctgcc gtcagattcc accagccctc agtggcccag ccttcgccgt ccttgtagcc
     1321 gagcgcaata ccaacgcgac tcttggtgat attgcagatg cggaaatcgg cggcagcgcg
     1381 cgtcgccatc aatgccagca tgaaagtcaa gacaccgcag agcgagcggg ccggaccagc
     1441 gtatgaccgc gtataggcga ttcgcaaagg tatatccatg cctcattggc ggttcgcgcc
     1501 atcgccctag attactgcgg gtcaacaaaa atggcacgga aatcgttgac attagtgtaa
     1561 gtaggccccg gttgaagcag gtcaccgagg cgttcaaaaa atcccgtgga atcgttttcg
     1621 gcaagaaacg cggcgggatc gaggccgagt ttcttggcac gagcaagcgt ggtgtcgtca
     1681 atgaaagcgc cggccgggtc gttcggactt ccggcgccgc catcagtgcc gtcagtgtca
     1741 ccggcgatcg ccgcaatccc gggcgtgccc tggagcgcct gcgcgagcgc tagcgcatat
     1801 tcctgattcg gaccgccacg gcctttgcca cgaatggtca cggtaagctc gccgcccgac
     1861 acaatgacgc cgcgttgccc ccttgcccgc atgctcttgg ccagcctggc ttgggccaca
     1921 gctacgtcgc gagcttcacc ctcgattcga tcgccgagaa atttgcattc atagccgtga
     1981 gctcgtatcg ccgcttcggc ggcgcgaaag gcctccttcg gacgggcgat aaggcgaaag
     2041 gcggtacggt cgaaagctgg atcctgcggc tttggcgttt cgttggccgg atcggccaat
     2101 gcccgaccga tcgcaggcga aatatcaagc cggaatcgcg ccatcacggc gcgggcatcc
     2161 gcaagcgtgg tcggatccgg tacggagggt cctgaaccga tcaccgccgg atcgtcgccg
     2221 gacacgtccg acacggcgag tgtgaccatc cgtgccggat acgcaagcct gccgagccgt
     2281 cctcccttga tgcgtgatag atgcttgcgc acagcattga tctcgctgat ggtcgctccc
     2341 gatctaagca gcgctcgatt gacggcctgc ttttcggcaa gcgtcaggcc gacggaaggg
     2401 gcaatccagt ttgccgaagc tccacccgat aacaacacga gtacgaggtc gtccgcggtg
     2461 gctccttcgg caaggctcag cgcgcgttcc gccgccgcaa ggctcgcgtc atctggaacc
     2521 gggtgaccgg cttccgtcac tgtgacaatt cgggtggggc gaccatatcc gcgccgagtg
     2581 accgccgctc caaccagccg tgacgacgaa agacgcaaat catcgagata atgtcgctcg
     2641 gcaatctccg tcatcgagcc cgccgccttg ccggccgcga gaatgattaa gcgtccagcc
     2701 gctggcggat ccggaagtcg gggaacgaga cagcttgccg ggtgggcagc cgccaccgca
     2761 atgcggtaga gttcgtcgag gaaagtgcgc agggagtgca tatgtgaagt cagatcgtat
     2821 cccgggttgc aaaggggccc cggcctatcg gattggctgg tgcgagatgc ggatacctca
     2881 aaattcagcc cgcgcaatgt gacatgcagc cccggatgct tatgttcagc ccgttatgga
     2941 gcatcgaaac aagatggaca ttgacgaaaa aacccgcgta gagcttgaag ccgccgtata
     3001 ccgccgcctg gtggagcatc tccgccaacg tactgacgta cagaacatcg acctgatgaa
     3061 ccttgcgggc ttctgccgca actgcctgtc caactggatg aaggatgctg ctgatgccaa
     3121 aggattctcg atgaccaagg atatgagccg ggaaatcgtc tacggcatgc catatgacga
     3181 gtggcgcgcc aagcatcagc gcgaagcgag caacgagcag aaggccgaat tcgaaaagac
     3241 gcagcacaag cactgataga tgcagggggc acgacgctat tgtggatgac tggcgtctgc
     3301 gtcggatcat gccttgcgaa accgcggcgg cttgcgcaac gttctaccgt gcaaatccgt
     3361 tgcgtcaacg cagggagtcc ttcatgtccg ccgtaaccgc cgccaccgcc atcaaggaca
     3421 agcccaagga aggcacgtcc acgcgcttcg caaaggatca gctcaaggcg atcgtcgagc
     3481 gcatcgagca tcttgaagaa gaaaaaaagg ccatttctga cgacatccgc gacgtttatg
     3541 ccgaggccaa aggcaacggc tatgacgtca aggcgcttcg tacggtcatt cgcttgcgca
     3601 agcaggataa agacgaacgc gccgagcagg aggcgatcct ggaaacctat ctgcatgcgc
     3661 tcggcatgat ttgaataagt ttattgcagc cacgctgtgc gttgggggaa cgcgtaggtg
     3721 gtcaggaaga ccaccgcctc gccactgaaa ctgtccgtcg taatccccgg ataggggtcg
     3781 ttcgcaaacg acattgcgac ggacgtagtg ggcttgttca tcaaggccct cagctcggtg
     3841 aaatcaggct cgccatagag cgttgccgtc atcgaatcgg ataggcgtgg ggcgagaatc
     3901 atcgctcgca gccacggatc gtcgtagcgc atgccgggtt ttgctgcttg gaccaccagc
     3961 ttggcgcgcg cgatcgaccc cgccactgtc gtgcgggcaa aacttttctt tggcacggtg
     4021 gagatgggtt cacgcggcgc cagagccggt gcggcggcgc gaatcggtcc ctgctccata
     4081 ggctgctcgg cgtgggcagc cgaaacgtcg ccgccatgcg gcggttgggt cgcataggcc
     4141 aataccatat cgagcggaac gcggtcgtta tcagcctcgc gaatcggcca gggcatcaaa
     4201 ctgccagcgg tatctgggtg cgacatcggg gcacgaggga tcggttgtac tggtgcgggc
     4261 ggggagtcgg taagacctaa agcccattga tcgccgccgg caggtccggg catgacagcg
     4321 gagtcgttgc ccgcatacgc tactagggcc gaggtcgcag cagatcgttg cgggcgcgcc
     4381 ggcgggaccg gtaccgagac gctgcggacc ggcttggagt caacagaggc gaggctgaac
     4441 gagccggcac gggaagccgg ccccgtcgaa gtagtgacgc ccggcgccgc gtgagccgag
     4501 tcgttatctt cgtcgtcatc caaatgaaac aaggtggcaa gcaggctctt cttgcgggtg
     4561 ccttgggccg ccccggtatc gactcccgcc gcctgtgcgg cactgagcga catttgcgaa
     4621 ggaaccgacg agccgcgctt ctcgatatcc gctagggcca atgcgtatcc ggatagtgga
     4681 tgaccgtcgg acgggacgtg aacagtccgc ccattcggga agacacgggc aagttgatcg
     4741 tgggtcatgc gcggccaatg acgaacactg cccacatcga ggtggacgaa cggcgatccc
     4801 gaggaggggt agtagcccac cccgccgcgc tgcaagcgca ggccagcctc ccgtaactcc
     4861 tccagcgagg cgcccgggat atagaagtcc atcgccttgc ccagcgtgtg ctggctgaat
     4921 tgcgccaccc cactgctacg gcggcgcagc atggcgttag tggatggcga acgatagccg
     4981 cacaccacat ggatcgtctt gtcgccgccg acctcccggg acacctccca gatcacgtcg
     5041 aacagacgcg ggtccatatg aatatcttct tccttgcgcc agtcacgaac gaaccgatca
     5101 agccttttga gcgcctcgtc gtcatagcga ccgtcgcgtt tataggtgat cgtaatgtct
     5161 tcgtcggtat
//
LOCUS       DATILV010000220         2497 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2610187, whole genome shotgun sequence.
ACCESSION   DATILV010000220 DATILV010000000
VERSION     DATILV010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2497)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2497)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2497
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2610187"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1564
                     /locus_tag="VLJ17_05095"
     CDS             <1..1564
                     /locus_tag="VLJ17_05095"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSV22389.1"
                     /translation="KPTIRREVSMFWSIRLALLSLVIVLAAAQVPGYAQSSAAALLQQ
                     SANAMGGLTALRALKTQVIESEGKQFDSSSTPQPLGPTRQITTFRYTLTRDLTQPRFR
                     LQWEGQSLAGDQTVRFVEIIDGSAGMLQEGGGKQIRLHPGRLATRLREEQRNPVRLIL
                     VALNQKSLRQRGDAEIDGKRYTVLSFTESGDEFRIYIDAQTRLPAQTEILEDDPLEGD
                     SSYMLRYGDWRKVDRVLLPFSLRYELNGRALQEEQIKSIRHDAPLAGDVFAIPESVRS
                     EKTDAKPIASQWILRRVAGNVSYQDMGRAPVIQWVELAPGVHKIQGSSHATILVEMRD
                     HLVAIEGPLYEARTAPVIKSIKERFPGKPIRYAIPTHHHLDHAGGIRAFMAESAAIIV
                     PFNAQAFYAKVARAPHTRNPDSLERNKGAIVIEGFGGGPRVLSDGARQVEVYPLPTSH
                     AEDLVVVYLPKERLLIEADHISPRDGQVRPGPRVKEFVQELDKLKLDVATIVGIHGDQ
                     ASLEATRAAAKK"
     gene            1680..2099
                     /locus_tag="VLJ17_05100"
     CDS             1680..2099
                     /locus_tag="VLJ17_05100"
                     /inference="COORDINATES: protein motif:HMM:TIGR03618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03618 family F420-dependent PPOX class
                     oxidoreductase"
                     /protein_id="HSV22390.1"
                     /translation="MEWKEALPLLQGNHSGVAISVTPKGRAQSTVVSTAVLDGKVGFA
                     SRPHTVKVKNIQRTGRATVTVIKLDTRRYVTVEGPASIEPWQDTPAHIKRLKDLYTAM
                     GRAPKGDEEFARQMRDEQRSLVLVTPERVYGSLRSGA"
     gene            2371..>2497
                     /locus_tag="VLJ17_05105"
     CDS             2371..>2497
                     /locus_tag="VLJ17_05105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015319107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HSV22391.1"
                     /translation="MHLPVNPPVLPMLAKRASELPVGGTWIYEPKWDGFRALVFRD"
BASE COUNT          557 a          723 c          739 g          478 t
ORIGIN      
        1 caaaccaacc atccgaaggg aggtatctat gttctggagc attcgtcttg cgctattgtc
       61 tctagtcatt gtgctcgcgg ccgcgcaggt gcccgggtat gctcagtcgt ccgccgccgc
      121 gctgctccag caatcggcaa atgccatggg cggcctaacg gcgctgcgcg cgctgaagac
      181 ccaggtgatt gaaagcgaag gcaaacagtt tgattcctct tcgacgccgc agccgttagg
      241 tccgacccgg caaataacaa cttttcgcta taccctcacg cgcgatctca cccaaccccg
      301 attccggttg caatgggagg gacaaagctt ggcgggcgat caaaccgtcc gctttgttga
      361 aatcatcgat ggctctgccg gaatgctgca ggaaggcgga ggcaagcaaa tccgcctgca
      421 tcccgggcgt ttggcaacgc gcctgcgcga ggagcagcgt aacccggtaa ggctcatttt
      481 ggtcgccttg aaccagaaga gtttgcggca acgcggcgac gccgagattg atggcaaacg
      541 ttacacggtg ttgtcattta cggaaagcgg cgatgagttt cgcatctaca tcgatgcgca
      601 aacgcggcta ccggcgcaaa ccgaaattct cgaagacgac cctctcgaag gcgacagcag
      661 ctacatgttg cgttacggcg actggcgcaa agttgaccga gttctgctgc cgtttagttt
      721 gcgctacgaa ctgaacggca gagcgctgca agaggaacaa atcaaatcga tacgccacga
      781 tgcgccgctg gccggcgatg tcttcgctat cccggaatcc gtgcggagcg aaaagaccga
      841 cgccaagccc atcgcatccc aatggattct gcgtcgcgtc gcgggcaatg tcagttatca
      901 agatatgggg cgcgcgcccg tgatccaatg ggtggaactc gctcccggcg tgcacaagat
      961 tcaaggcagc tcccatgcga cgatcttggt cgagatgcgc gatcatctgg tcgccatcga
     1021 agggccgctg tatgaagccc gcaccgcgcc cgtgatcaag tcgatcaaag aacgattccc
     1081 cggcaagccg atccgttacg cgatcccgac ccatcatcat cttgaccacg caggcggcat
     1141 tcgagcgttt atggccgaga gcgcggcgat aatcgtgccg tttaacgccc aggcgttcta
     1201 tgcgaaagtc gcgcgtgcgc cacatacgcg taatcccgac agtctggagc gcaacaaagg
     1261 agccattgtc atcgaagggt ttggcggcgg ccccagagta ctcagcgacg gcgcgcgcca
     1321 ggtcgaggta tatccgctcc ctacctctca cgcagaagat ttggtcgtgg tatatctacc
     1381 caaggaacga cttcttatcg aagccgacca catcagccct cgtgacggtc aggtgaggcc
     1441 gggccctcgg gtgaaggaat ttgtccaaga gctcgacaag cttaagctcg acgtagcgac
     1501 gatcgtcggt attcacggtg accaggcgag tctcgaggcc acccgggcgg cagccaagaa
     1561 ataggtggcg acgcttaacg cgaggcggta ttgagtgtgg ctcaggtttg ctgccccgct
     1621 aagtaccgag ttcatcgcgg ttgaggcaac aaaactttaa cgttcggagg aacgactaga
     1681 tggaatggaa agaagcactc ccgttgttgc agggaaatca cagcggtgtc gcgatcagcg
     1741 tcacgccgaa gggccgtgcg cagtcgaccg tcgtctcgac ggctgtgctg gatggcaagg
     1801 tcgggttcgc gtcgcggccg cacaccgtga aggttaagaa catccaacgg acaggccgag
     1861 cgactgtcac agtcatcaag ctcgacaccc ggcgctacgt caccgtcgag ggcccagcgt
     1921 ccatcgagcc ttggcaagac acgccggcgc acatcaagcg tctgaaggac ctctacactg
     1981 ccatgggcag agcccccaag ggtgacgagg aatttgcccg gcaaatgcgg gatgaacagc
     2041 gaagcctggt tctagttacc cccgagcgcg tctatggcag cctccgatca ggcgcctagc
     2101 aggccgagat agctaaagtc gtgctcgtct ctcgtgctcg tgctcgtttt tttcgaacac
     2161 gaaccgcgaa cacgacaaac cagcacgatt cgtttcggag caaagtcccg tgcgttcacc
     2221 gatccggttg cggcggcgtt cgtttccgtg attcgtcaaa cgatttgaac aaagcgaagc
     2281 gattgaacgg ctgaaacgac ttgaaccttc ggtatgccga gagccctgga acgtttggaa
     2341 cggctggaac caacactaag agattgagct atgcatcttc ccgtgaaccc gccagtcttg
     2401 ccgatgctcg ccaagcgggc cagtgagtta ccggtaggcg gaacatggat ctacgaaccg
     2461 aagtgggatg ggtttcgtgc cctggtgttt cgcgacg
//
LOCUS       DATILV010000221         3527 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1587542, whole genome shotgun sequence.
ACCESSION   DATILV010000221 DATILV010000000
VERSION     DATILV010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3527
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1587542"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..163)
                     /locus_tag="VLJ17_05110"
     CDS             complement(<1..163)
                     /locus_tag="VLJ17_05110"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017263697.1"
                     /note="part of NADH-ubiquinone oxidoreductase complex I;
                     shuttles electrons from NADH, via FMN and iron-sulfur
                     (Fe-S) centers, to quinones in the respiratory chain; NuoF
                     is part of the soluble NADH dehydrogenase fragment, which
                     represents the electron input part of NADH dehydrogenase;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit F"
                     /protein_id="HSV22392.1"
                     /translation="MRPDGSAMDLRAYQQAGGYEAVRRVLHGGMTPKAVTSEVKEANL
                     RGRGGAGFPT"
     gene            complement(196..660)
                     /gene="nuoE"
                     /locus_tag="VLJ17_05115"
     CDS             complement(196..660)
                     /gene="nuoE"
                     /locus_tag="VLJ17_05115"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF013426.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HSV22393.1"
                     /translation="MLRPEEISEIEAEAAHYPTREAVCIDAMKIVQRHRGWVSDESLH
                     DIAAHLGMSPTDLDSVATFYNLIFRKPVGRHVIMLCDSVSCWMMGYDRMCEHLGQRLG
                     IGLGETTPDKRFTLLPIVCLGCCDRAPALMVNDDLHTNLDPQRIDRALETYQ"
     gene            complement(673..2418)
                     /gene="nuoC"
                     /locus_tag="VLJ17_05120"
     CDS             complement(673..2418)
                     /gene="nuoC"
                     /locus_tag="VLJ17_05120"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013504134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030964 - NADH dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C/D"
                     /protein_id="HSV22394.1"
                     /translation="MIATPTIGDAIMARFGSAAVVQQTCDRIPTFWVKKEQAHGFLRH
                     LKYDVDRPYKMLYDLTAIDERMRTHRDGQPPSDFTVVYHLLSFDRNEYVRIKVPLDHT
                     QLSLPSIVDLWPAANWYEREVWDMFGIVFDGHPHLQRILMPKSWVGHPLRKDHPARAT
                     EMGPYHLSPEKELAEQEALRFKPEDWGMSRERDDADFVFLNVGPQHPGTHGVLRIALQ
                     LDGEEIVDAVPDIGFHHRGAEKMGERQSWHTYIPYTDRIDYLGGVMNNLPYLMAVETL
                     AGIEVPPRAQVIRMMLAELFRINSHLVWYGTLAQDLGQMSPVFYTFNDRERTFAIIEA
                     VCGGRMHPEWFRIGGVEADLPRGWERMFRDFIAYLPPRLAEYDREVMQNRIFKGRTKG
                     IGTYTVDEAIEWGVTGPNLRACGFGWDFRKRQPYSGYEQFEFEIPTAETGDCYGRAVV
                     RVEEMRQSLRIIEQCVTNMPEGPYKSDHPLTTPPVKPRTMHDIETLITHFLSVSWGPV
                     IPPGEALGAIEATKGNNGYYLVSDGSTVSYRTRIRTPSFPHMQMLPVISRGTMVPDLI
                     AILGAMDFVLADIDR"
     gene            complement(2415..3056)
                     /locus_tag="VLJ17_05125"
     CDS             complement(2415..3056)
                     /locus_tag="VLJ17_05125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004280778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HSV22395.1"
                     /translation="MQWSLTKPDITGLVAHPDHEAFEQAVRRSVVLSRLEDLVAWSRK
                     NSLWPFNFGLSCCYVEMATSITSKFDISRFGAEVIRGTPREADLMVVAGTVFIKMAPI
                     VQRLYEQMMEPRWVISMGSCANSGGMYDIYSVVQGVDKFLPVDVYVPGCPPRPEAFVE
                     GLLLLQKLVQVERRPLSWVVGQQQTTRPPLPSMRDLMQPTRREASVLREPDEV"
     gene            complement(3069..3452)
                     /gene="ndhC"
                     /locus_tag="VLJ17_05130"
     CDS             complement(3069..3452)
                     /gene="ndhC"
                     /locus_tag="VLJ17_05130"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF012717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HSV22396.1"
                     /translation="MELLGSQELPLIVYSALVVFVTAAMLASYVLGQRHWEQATNTPY
                     ESGIVSEGSTHVRFSARFYLVAMFFVVFDLEAVFLFAWAVAAREAGWAGYWEVVIFIG
                     VLVAALIYLWGVGALDWATERANRR"
BASE COUNT          678 a         1149 c         1032 g          668 t
ORIGIN      
        1 ccgtcgggaa cccggcgccg ccccggccgc gcaggttcgc ctctttcacc tcgctggtga
       61 cggccttcgg cgtcatgccg ccgtgcagga ccctgcggac cgcctcgtat ccgccggcct
      121 gctggtaggc ccggaggtcc atcgccgaac cgtccggtcg catgttcttg gtcagcggct
      181 tttcggcgac agacgtcatt ggtaggtctc cagcgcgcgg tcgatcctct gtggatccag
      241 gttggtgtgc agatcgtcgt tcaccatcaa ggccggagcc cggtcgcaac agccgaggca
      301 cacgatcggc agcagcgtga atcgtttgtc cggggtggtt tcaccaagcc cgatgccgag
      361 gcgctggccg agatgctcgc acatccggtc gtagcccatc atccagcagc tcacgctgtc
      421 gcagagcatg atcacatggc gccccacggg cttgcgaaaa atgaggttat aaaaggtggc
      481 gacactatcc aggtccgtgg gcgacatgcc gagatgcgcg gcgatatcat gcaggctttc
      541 gtcggacacc cagccccggt gccgctgcac gattttcatc gcatcaatgc acaccgcttc
      601 acgtgtggga tagtgcgcgg cttccgcctc gatctcgctg atttcctcag gcctcaacat
      661 ggcaccgcct ccttatcgat caatgtccgc gagcacaaaa tccatcgcgc ctaaaatggc
      721 aatcagatcc ggcaccatcg tgccccggga gatcaccggc agcatttgca tgtgcgggaa
      781 cgacggcgta cgaatgcgcg tgcggtagga caccgtgctg ccgtcgctga ccaggtagta
      841 gccgttgttc cctttggtcg cctcgatggc gccaagcgcc tctccgggcg gaatcacggg
      901 gccccagctc acgctcagga agtgggtgat gagggtttcg atgtcgtgca tcgttcgggg
      961 cttcaccggc ggcgtggtga ggggatgatc cgatttgtac gggccttcag gcatgttagt
     1021 cacgcactgc tcgatgatgc gaagactctg ccgcatctcc tccactcgca ccactgctcg
     1081 gccgtagcaa tcgccggtct ccgcggtggg gatctcgaac tcgaactgtt cgtagccgga
     1141 gtagggttgt cgcttgcgaa agtcccatcc gaacccgcag gcgcgaaggt tcggcccggt
     1201 cacaccccac tcgatggcct catcgacggt gtaggtgccg atccccttcg tccgcccttt
     1261 gaagatgcgg ttctgcatca cttcccggtc gtactccgcc aatcggggcg gaaggtacgc
     1321 gatgaaatct ctgaacatcc gctcccagcc tctgggcaga tccgcctcca cgccgccgat
     1381 tcgaaaccat tccggatgca tgcgcccgcc gcagacggcc tcgatgatcg cgaacgtgcg
     1441 ctcgcgatcg ttgaacgtat agaacaccgg cgacatctgc cccaggtcct gggccagcgt
     1501 gccataccag accagatggc tgttgatgcg aaacaattcc gccagcatca tccgaatgac
     1561 ctgggcccgg ggcgggacct ctataccggc cagcgtctcc accgccataa gataaggcag
     1621 gttgttcatc acgccgccga gatagtcgat gcgatcggta tacgggatgt aggtgtgcca
     1681 ggattgacgc tcccccatct tttccgcccc ccggtgatgg aacccgatgt ccggcaccgc
     1741 gtcgacgatc tcttcgccgt cgagttgcaa ggcgatccgc agcacgccat gcgtgcccgg
     1801 gtgctggggg ccgacattga gaaatacgaa atcggcgtca tcgcgctcgc ggctcatgcc
     1861 ccagtcctcg ggtttgaaac gcagcgcctc ctgctcggcc agttccttct ccggcgacaa
     1921 gtgatacggc cccatctcgg tcgcgcgcgc ggggtggtcc ttgcgcaagg ggtggcccac
     1981 ccagctcttg ggcatcagaa tgcgctggag atgcggatga ccgtcaaaga cgatcccgaa
     2041 catgtcccac acttcgcgct cgtaccaatt ggcggcgggc cagaggtcca caatgctggg
     2101 caaggacagt tgtgtgtggt cgagcggtac cttgatgcgt acatactcgt tgcgatcgaa
     2161 cgacagcaga tgatagacca cggtgaaatc gctggggggc tggccgtcac ggtgcgtgcg
     2221 catgcgctcg tcgatcgcgg tgaggtcgta gagcattttg tacggccggt ccacgtcgta
     2281 tttcaggtgc ctgagaaagc catgcgcctg ctctttcttg acccaaaatg tagggatccg
     2341 gtcgcaggtt tgttggacaa cagccgccga cccgaaccgg gccatgatgg cgtcgccgat
     2401 ggttggcgtg gcgatcatac ttcgtccggc tcccgcagca cgctggcctc ccgccgagtc
     2461 ggctgcatca agtcacgcat ggagggaagc ggcggccgcg tggtctgctg ctgccccacc
     2521 acccagctca acggccggcg ttctacctgc accagttttt gcaagagaag caggccctcc
     2581 acaaaggctt ctggacgcgg cgggcacccc ggcacataca catcgacagg aaggaactta
     2641 tccacgccct gaaccacact gtagatatcg tacatgccgc cggaattcgc gcacgaaccc
     2701 atggaaatca cccagcgtgg ctccatcatc tgctcgtaca gccgctgcac gatcggcgcc
     2761 atcttgatga acaccgtccc tgcgaccacc atgagatccg cctcgcgggg tgtcccgcga
     2821 atcacttccg cgccgaagcg ggagatatca aacttgctgg taatgctggt ggccatctcc
     2881 acgtaacaac aggacagccc gaagttgaac ggccacaggg agttcttacg actccaggcg
     2941 accagatcct ccaggcgcga gagaaccaca ctgcggcgta cagcctgttc gaacgcttcg
     3001 tggtccgggt gagccaccag gccagtgatg tccggtttcg tcagcgacca ctgcatagac
     3061 tgcctccgtt atcgacggtt ggcccgctcc gtggcccaat cgagcgcgcc gacgccccat
     3121 agatagatga gtgccgccac cagcacaccg atgaaaatca ccacttccca atagcctgcc
     3181 cagccggctt cgcgtgccgc gaccgcccag gcaaacagaa acaccgcttc cagatcgaac
     3241 accacgaaga acatggcgac gagatagaag cgcgccgaga agcgcacatg tgtggagcct
     3301 tctgagacaa tgccggactc gtacggcgtg ttggtcgctt gttcccaatg ccgttgtccc
     3361 agcacatatg aagccagcat ggcggcggtc acaaatacca ccagcgcgga gtacacgatc
     3421 agcggcagct cttgcgaacc taatagttcc atcgcacttc ctctctaact agctcttccc
     3481 cgccttcgcc cgggtgccaa gcagttccag cagcacggca gcgtcca
//
LOCUS       DATILV010000222         5712 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3121818, whole genome shotgun sequence.
ACCESSION   DATILV010000222 DATILV010000000
VERSION     DATILV010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5712)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5712)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5712
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3121818"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..652
                     /locus_tag="VLJ17_05135"
     CDS             <1..652
                     /locus_tag="VLJ17_05135"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSV22397.1"
                     /translation="RPPYSTLRDFAPISNLASFPLILSIHPSHPSKNVQELVAWLKAN
                     PDKSNYATSSSAFTLATELFKLKTGAPGTGIPYKSSNEMLVSVIAQQSLFTITDPPPT
                     APQVKAGQVRALAVTAAKRLEDLPDVPTMAEAGVSGMEVGLWSGVFAPAATPPSIVRK
                     LEAELRKIMQMADVKEKFRAMATPTVGSTAAEFAHLIDTETRMWGEVGRAANVKLE"
     gene            complement(726..2435)
                     /locus_tag="VLJ17_05140"
     CDS             complement(726..2435)
                     /locus_tag="VLJ17_05140"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HSV22398.1"
                     /translation="MTNRLAPLAVLTIVISAVSAHAQAPAADAILVNGKIITVDDASS
                     IVQAMAIRDGKVLAVGSNEDIRKRADGRTTVVDLGGRTVVPGLMDSHIHALRAGLTYS
                     VELSWIGVPSLAKGLDLIREAARTSPPDAWIKIGGGWTELQFPEKRGPTIEELIAAAP
                     NRPVYVQRLYNTAWITPAGVKLMKLMADTEIPGGKAEKDAGSNLTGVFTGVNRTFNFF
                     TAKIPGPSFSDQVAGTQKYFRELNRLGMTAVNDFPGGGMFPQDFRAIQTLWSRGEMTL
                     RVAFHISSNSQHTLEDFKSLTLFTPMNFGDDMLRYRGIGESLTQGIYDGSTVGLPYNP
                     SAKDWEEFCTVAKWAADHGITVHQHAASDRAAAQILDCFEAVNKEIPITSLRWQIAHI
                     ENASDETLRRMKALNMGWAVQDRLVYSGQIVSKVLGPEASRRAPPIKTALKMGLHVAA
                     GTDSDQVAPYNPFVSIRWLLDGKVIDGTPMRGPEESPNREEALRMYSLDAAWFTFDEA
                     KRGSLEAGKYADLAVLSEDYMTVPVEKVSELHAVLTMVGGRAVYGEGPFATLEAGGSR
                     RAD"
     gene            complement(2539..3036)
                     /locus_tag="VLJ17_05145"
     CDS             complement(2539..3036)
                     /locus_tag="VLJ17_05145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018457574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HSV22399.1"
                     /translation="MPELSEKLMRGAALVAQRLRERRETVAIAESSTGGLISAALLAV
                     PGASAYFLGGAVVYTQAARRALLNIPDSAMVGMRASTELYALLLARTARERFSATWAL
                     SETGAAGPTGNRYGDAAGHSCIAVSGAKECALTIETGSDDRAANMQTFTNAALDLLAA
                     TLERA"
     gene            3131..4756
                     /locus_tag="VLJ17_05150"
     CDS             3131..4756
                     /locus_tag="VLJ17_05150"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HSV22400.1"
                     /translation="MNNADLIVATLKAAGIDYGFGIPSGNVLPLMEAMRTGGIDFVLT
                     AHEGSAGFAADVSGRMTGRPGLCIATLGPGATNLTTGVGCAYLDRSPLIAITCNLYTD
                     QLGRRIQMWIDHHALFAPITKGTFRLENGRITQTLQNAIRIALTQPLGPVHLDLPEDV
                     ALAPAQEKVAPPAAPVRIAAAANATIERAAQLIASAKRPVAVLGASAARVDDPDRLRG
                     IIEHLGLPFATTTMAKGMIDEDHPLAIGCIERACRQVQRRLLRSADLVVGIGYDTVEV
                     EYEAWIGDVPLVHVDIEPADVVPAVNLVHQVIGDLEASLAQLAATSGTANEWSAAMLA
                     DHRRSFQAALRPQSQLTSASKSVAFTAHAAIDAVRRALPREGILTFDVGAHTHQIASQ
                     WTAHAPKTFQITNGWSSMGFGLPAAIAAKLARPDLPVVCLIGDGCFQMTCGEVATAKR
                     LSLTLPIVVLDDKWLALIKVKQMRRQFPLYGTELQPEEYREPPAHYFGVPAIGVRSAT
                     DLEAVVAKALAADGPTVIEAVVDSGHYVDTVYD"
     regulatory      5036..5144
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00442"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="guanidine-I (ykkC/yxkD leader) riboswitch;
                     Guanidine-I riboswitches control genes whose products are
                     involved in modification or pumping out guanidine as a
                     toxic compound from bacteria; This is class of guanidine
                     riboswitches is based on the ykkC/yxkD leader; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="guanidine"
                     /db_xref="RFAM:RF00442"
     gene            5223..>5712
                     /locus_tag="VLJ17_05155"
     CDS             5223..>5712
                     /locus_tag="VLJ17_05155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012030259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid kinase"
                     /protein_id="HSV22401.1"
                     /translation="MKPVSRLLPVFVAATLIAQGFCSPAHAVTKKEFNIAWTIYVGWM
                     PWPYAAEAGIVKKWADKYGITINITQINDYVESINQYTAGKFDGVTLTNMDALTIPAA
                     GGVDTSAIIMGDFSNGNDGVVLKSGKTLSDIKGRKINIVELSVSHYLLARGLATIHLK
                     EKD"
BASE COUNT         1125 a         1766 c         1697 g         1124 t
ORIGIN      
        1 gcggccaccc tattcaacgc tcagggattt cgcgccgatc tccaaccttg cctcgttccc
       61 gctgattctc tcgattcatc cgtcgcatcc gtcaaaaaat gttcaagaac tggtggcgtg
      121 gttgaaggcc aatccggaca agtccaacta cgccacgtct tcgtcggcgt tcaccttggc
      181 gacggaactt ttcaagctga agacgggcgc gcccggcacg gggattccct acaaaagcag
      241 caatgaaatg ttggtcagtg ttattgccca gcagtcgcta ttcaccatta cggatccgcc
      301 accaacagcg ccgcaggtga aggccggaca ggtccgcgcg ctggcggtca cggccgccaa
      361 gcggctggaa gacctgcctg acgtgcccac catggcggag gcaggtgtat ccggcatgga
      421 ggttggcttg tggagcgggg tgttcgcgcc ggccgcaacg ccgccgtcca tcgtccgcaa
      481 gctcgaagcc gagctacgca agatcatgca gatggcggac gtgaaggaga agttcagggc
      541 catggcgacg ccgaccgtcg gcagcaccgc cgccgagttc gcgcacctca tagacacgga
      601 aaccaggatg tggggtgaag tcggtcgcgc cgccaacgtg aagctagagt gatctcggga
      661 cgcttagggc ggggtttgct ttagccccgc cgcacttctg ttctgcgggt ggattacgcc
      721 ttcggttaat ccgccctccg acttccgccc gcctccagcg tcgcgaacgg cccctcaccg
      781 tataccgccc tgccgcccac catggtcagc accgcgtgca actcggagac cttctcgacc
      841 ggcaccgtca tgtagtcttc cgacagcacc gcaagatcgg catatttgcc ggcttccagc
      901 gagccgcgct tggcttcgtc gaaggtgaac cacgccgcat cgagcgaata catgcgcagc
      961 gcctcctcac ggttgggcga ctcctctggt ccgcgcatgg gcgtgccatc gatcaccttg
     1021 ccgtcgagga gccagcgaat tgagacgaac gggttatagg gcgcgacctg atcggaatcg
     1081 gtgccggccg ccacatgcag acccatcttg agtgcggtct tgatcggggg cgctcgcctc
     1141 gaagcctcag gccctagcac cttcgaaacg atttgtcccg aatagaccag acgatcctgc
     1201 acggcccagc ccatgttcag tgccttcatg cgccgtagcg tttcgtcgga agcgttttct
     1261 atgtgggcga tctgccaacg caggctggta atcgggattt ccttgttcac cgcctcaaaa
     1321 cagtcgagaa tttgcgcggc ggcccgatcg ctcgctgcgt gctgatgaac cgtaatgccg
     1381 tgatcggcag cccatttcgc caccgtgcag aactcctccc agtccttggc gctcggattg
     1441 tagggcaatc caaccgtgga tccgtcgtag atgccctggg tcagcgattc cccaataccg
     1501 cgatagcgca acatatcgtc gccgaaattc atcggtgtaa acaacgtcag cgatttgaaa
     1561 tcctcaagcg tatgctggct gttcgaggaa atatggaagg cgacccgcag cgtcatttcg
     1621 ccccgggacc ataacgtttg aatcgcgcga aaatcttgcg ggaacatgcc gccgcccggg
     1681 aagtcgttga cggccgtcat gccgagccga ttgagctcgc ggaaatattt ctgggtgccg
     1741 gcaacctgat cggaaaagct cggtcccgga attttcgcgg tgaagaaatt gaacgtgcga
     1801 ttgacgccgg tgaacacacc ggtgaggttg ctgccggcat ccttctcggc cttgccgcct
     1861 ggaatctcgg tatccgccat aagcttcatc agcttgacgc cagccggcgt gatccaggcc
     1921 gtattgtaaa ggcgctgcac atagaccggc cgattgggtg ccgcggcgat gagctcctcg
     1981 atcgtcgggc cgcgtttctc tgggaactgc aattcggtcc agccgccgcc gatcttgatc
     2041 caagcgtctg gcggcgatgt tcgtgcagcc tcgcggatga gatcgaggcc cttggcaagg
     2101 ctcggcacgc cgatccagct cagctcaacc gagtaggtga ggcccgcccg cagcgcatga
     2161 atgtgggaat ccatcaggcc cggcaccacc gttcggccgc cgagatcgac gacggtggtg
     2221 cgcccatcgg cgcgtttgcg gatgtcctcg ttggagccaa ccgccaggac ctttccatcg
     2281 cgaatcgcca tcgcttggac gatcgaagag gcgtcgtcga ctgtgatgat tttgccattt
     2341 accagaattg cgtctgcggc gggcgcctgg gcgtgagcgg acacagccga aatcacaatg
     2401 gtaagcacgg cgagcggcgc aagacggttc gtcattgctt tcctccgata aattcatgcg
     2461 gtcggacaca caaccaaaaa gggccgcccc cgccgtttgg cagcagctta acatggacgc
     2521 atgacggtca atacgcgatc aggcgcgctc cagcgtcgcg gcaagtagat cgagtgccgc
     2581 gttcgtgaat gtctgcatgt tggcggcgcg atcgtcactg ccggtctcga tcgtgagggc
     2641 gcactctttc gccccggata ccgcaataca actatggccg gccgcatcgc cgtagcgatt
     2701 gccggtcggc ccggcagcgc cggtttcgga caatgcccag gtcgcggaaa atcgttcgcg
     2761 agctgtacgt gccaacagca gcgcatagag ctccgtcgag gcccgcattc caaccatggc
     2821 ggagtctgga atattcaaca aggcgcgtcg cgcggcctgc gtgtagacaa cagcgccgcc
     2881 aagaaaatag gccgacgcgc ctggcaccgc cagcagcgcg gccgaaatca ggccaccggt
     2941 tgacgattcg gcaatggcga cggtctcgcg acgctccctt aggcgctgcg ccacgagtgc
     3001 cgcgcctctc ataagcttct ccgatagctc cggcatgggg tctcccgtaa catttgtggc
     3061 gccgcgcacc gcgatttaat aggttctccc tctgccacac caaccacctg aatgtgaagt
     3121 ctcaaacccg atgaacaacg ccgatttgat cgtcgccacc ctcaaggcgg ccggaatcga
     3181 ctacggcttc ggaattccaa gcggcaacgt tttgccgctg atggaagcga tgcggacggg
     3241 cggcatcgac ttcgtgctca ccgcgcatga gggctcggcg ggatttgcag ccgatgtgtc
     3301 tgggcgaatg accggcaggc cgggcctctg catagcgacg ctcggtcccg gcgccaccaa
     3361 cctcaccacc ggcgtcggct gcgcctattt ggatcgctcg cccctgatcg cgatcacctg
     3421 caatctttac accgatcagc ttggccggcg catccagatg tggatcgatc accatgcgct
     3481 atttgcgccg attaccaaag gcacctttcg gctcgaaaac ggacgcatta cgcagacgct
     3541 acagaatgca attcgcatcg cattgacgca gccgctgggg cccgttcatc tcgatctgcc
     3601 cgaggacgtg gcgttggcgc cggcgcaaga gaaggttgcg ccgcccgcgg ctccggtaag
     3661 aatcgcggcg gcagcgaatg ccaccatcga acgcgccgcc caactcattg caagtgccaa
     3721 gcggccggtc gctgtgctcg gtgcatcggc tgcgcgtgtc gacgatccgg atagactgcg
     3781 gggcatcatc gaacatctcg gcctgccctt cgccaccacc acaatggcga agggcatgat
     3841 cgatgaagat catccgcttg cgatcggctg cattgaacgg gcgtgccgac aggtgcagcg
     3901 ccgcctgctg cgctccgccg acctggttgt cggcatcgga tatgacaccg tcgaggtcga
     3961 atatgaagcc tggatcggcg acgtccccct cgtccatgtc gacatcgaac ccgcggacgt
     4021 cgttccggcc gtgaacctcg ttcatcaggt gattggtgat cttgaggcct cgctggcgca
     4081 gctggccgcc acatcgggca cggccaacga atggtcggcc gccatgcttg ccgatcaccg
     4141 ccgatcgttc caagcggcgc tgcggccgca gtcccagctg acgtccgcgt cgaagtcagt
     4201 agccttcacg gcgcatgcgg cgatcgacgc cgtgcgaagg gcgttgccgc gcgaaggcat
     4261 tttaacgttc gatgttggcg cgcataccca tcagattgcg agccagtgga ccgcacatgc
     4321 gccgaaaacg tttcagatca ccaacggctg gtcttctatg ggcttcggtc taccggcagc
     4381 catcgcggca aagctggcgc ggcccgatct gccggttgtc tgtctgatcg gcgacggatg
     4441 cttccagatg acctgtggcg aagttgcaac cgcaaagcgc ttatcgctta cgcttccgat
     4501 cgtcgtgctc gacgacaaat ggcttgccct catcaaggtc aagcagatgc gccgtcagtt
     4561 tccgctttac ggaaccgaac ttcagcctga ggaataccgc gagccgccgg cgcactactt
     4621 cggtgttcct gccatcggcg ttcgcagcgc aaccgacctc gaggcggtgg tagcaaaagc
     4681 acttgctgcc gatggcccaa ctgtgatcga ggccgtagtc gactccggtc actacgtgga
     4741 cactgtttat gactgatacg tttcgcagtc tggcagccat cgttggatgg ggtgagcgct
     4801 tcgcgctctg cgacaagctt gtcgtccggc actgcttgag ccagacaggt tcgggtcggt
     4861 agccgagata tcggtgggac cgacgatgtg gatgtgactg tcgcagcaca tgtgcattgc
     4921 cttgcggcgt gtgctttcgc cttgggcggc agtgccgcca atttaggcgg ttgaccggca
     4981 ggttgattga aaatcaacac aattcccgtt ggcatggata ttgcgatcgt cacatcgagt
     5041 tggtggctag ggttccgacc ctcatcacag ggtgtctggt ccaagagcca ccgcttgggc
     5101 agggaaatcg cccaagtgca cggcgggata aaagcccggg agacctcgat cgccggattg
     5161 gcgtcgatgt gtcttgccaa tcctcgatcc cacgaattcc gatggacagc gaggattgtc
     5221 ccatgaaacc agtctcacgc ctgctacccg tttttgtcgc ggcaacgctc atcgcgcagg
     5281 gattctgctc gcccgcgcac gccgtcacca agaaggaatt caacattgcc tggacgattt
     5341 atgttggctg gatgccttgg ccctatgcgg ccgaggcggg aattgtcaag aaatgggccg
     5401 ataaatacgg cattaccatc aacattacgc agatcaacga ttacgtcgaa tcgatcaatc
     5461 aatacactgc cggcaaattc gatggcgtca ccctcaccaa tatggacgca ctaacgatac
     5521 cggcggcggg tggggtcgat acttccgcga tcatcatggg cgatttttcc aacggcaatg
     5581 acggtgtcgt gctcaagagc ggcaagacgc tcagcgacat caagggacgc aagatcaata
     5641 tcgttgaact atcagtgtcg cattatctgc tagctcgggg actggcgacc attcacctca
     5701 aggaaaagga ca
//
LOCUS       DATILV010000223         4957 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3888931, whole genome shotgun sequence.
ACCESSION   DATILV010000223 DATILV010000000
VERSION     DATILV010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4957)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4957)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4957
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3888931"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..468)
                     /locus_tag="VLJ17_05160"
     CDS             complement(<1..468)
                     /locus_tag="VLJ17_05160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011996048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indolepyruvate ferredoxin oxidoreductase family
                     protein"
                     /protein_id="HSV22402.1"
                     /translation="MSLKPVSLDDKYDLGKSRVFVTGFQALVRLTLMQKERDRRAGLN
                     TAGYVTGYRGSPLGTLDQQFLRAGGVLTKNDIKFHAATNEDLAATALSGAQHAELRGE
                     GRFDGVFGMWYGKGPGVDRSGDAFRHANFAGTSKYGGVIALMGDDHTAESSTTA"
     gene            complement(663..1439)
                     /locus_tag="VLJ17_05165"
     CDS             complement(663..1439)
                     /locus_tag="VLJ17_05165"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010683557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HSV22403.1"
                     /translation="MKASELFNLHGRVALVTGASSGLGARFAAVLAANGAAVGLVARR
                     RDRLTEVSARIEAAGGRAAAVDADVLDRAAMNRAFDAVEAAFGTITILINNAGVAHAN
                     RAVDMPEAEWRQVLGTNLDAVFFCAQEAARRMLAAGKPGAIVNIASVLGFGVAKGVVA
                     YTTAKAGVVQMTKALGLELAFKGIRVNAIAPGWFVTDLNRHYLASEAGDKLKREIPAG
                     RFGQDGDLDGALLLLASDAGRFIAGTTIVVDGGQMVALRG"
     gene            1523..2563
                     /locus_tag="VLJ17_05170"
     CDS             1523..2563
                     /locus_tag="VLJ17_05170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HSV22404.1"
                     /translation="MTDTVPAEKIPVTVLTGYLGAGKTTLLNRILSEPHGQKYAVIVN
                     EFGELGIDNDLIVGADEEIFEMNNGCICCTVRGDLIRIIQGLMRRKGKFDAIIVETTG
                     LADPAPVAQTFFVDQEIGRKAKLDAVITVTDAKWLKDRLRDAPEAKNQIAFADVILIN
                     KTDLVGDADLREIEARIRAINPYARLHHTQRCAIPLAEVLHRNAFDLDRILDVEPQFL
                     EAGDDHGHHHDHADGHHHDHEHGGLKHYHDEDMQSLSLKIDKALDPDKFFPWIQNLVA
                     QEGKNILRTKGILAFKDDPKRFAFQGVHMMLDGDHQRDWRDSEKRESRIVFIGRELPQ
                     SMIRKGFEECVA"
     gene            2651..3709
                     /locus_tag="VLJ17_05175"
     CDS             2651..3709
                     /locus_tag="VLJ17_05175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="WD40 repeat domain-containing protein"
                     /protein_id="HSV22405.1"
                     /translation="MARTSPAMTALQPVVPAQACPMATADTPSVVDRTRVVATEAPVV
                     GVYFLGSTAVFVLGDEALLFAAREPQRITVHSGGILAAVCDGERIVTGGDDGKVVATK
                     ADMTLVAIGADPKHRWIDHVAIAPDGTVAWSAGRDAFVQFRKGEPRKLEAPSTVGGLA
                     FAPKGLRLAIAHYHGVTLWFPNAEAPPERLEWKGSHLDVTFSPDGRYLVTAMQEPTLH
                     GWRLVEGRHMRMAGYSAKVRSMAWTADGKALATSGAPQLVVWPFASKDGPMGKEPQML
                     APNEHPVCVVACHPQKEVTAVGYEDGLVLLVRMTDGAEVLARRSDGVPVSALAWNARG
                     TALAFGTENGQGGVVDLT"
     gene            3896..>4957
                     /locus_tag="VLJ17_05180"
     CDS             3896..>4957
                     /locus_tag="VLJ17_05180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007594720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSV22406.1"
                     /translation="MTPAEPKIVKSASREARASFRWDDPLRFDDQLTEDERLIRDTAR
                     SYAQDKLLPRVIDAYLEEKTDRTIFNEMGALGLLGVTIPETYGGAEASYVSYGLVARE
                     IERVDSGFRSMMSVQSSLTMYPIYAYGDETQRKKYLPKLATGEWVGCFGLTEPDAGSD
                     PAGMKTYAERVSDGYRLTGTKTWITTAPLADVFVIWAKSAAHGDDIRGFVLEKGMKGL
                     SAPKIGGKLSLRTSTTGEVVMDGVVVPESSLLPNVSGLKGPFGCLNQARYGIAMGVMG
                     AAEDCWHRARQYTLDRKQFGRPLAATQLVQKKLADMETEIALGLQASLRVGRLMDEGK
                     MAPEMISIVKRNNCGKALDI"
BASE COUNT         1006 a         1518 c         1561 g          872 t
ORIGIN      
        1 cgcggtggta gacgattcgg ccgtatggtc gtcgcccatc agagcgatga caccgccata
       61 ctttgaggtg ccggcgaaat tggcgtgacg aaatgcatcc cccgaacggt cgacgcccgg
      121 ccccttgccg taccacatgc cgaacacacc atcgaacctt ccctcgccgc gcagctccgc
      181 gtgctgggcc cccgacagtg cggtcgcggc gagatcctcg ttggtggcag cgtggaactt
      241 gatgtcgttt ttggtgagca cgccaccggc acgcaagaat tgttggtcga gggtgccgag
      301 cggcgagccg cgatagcccg ttacgtagcc ggccgtgttg aggccggccc gccggtcacg
      361 ctccttctgc atcaacgtca gccgcaccag cgcctgaaag cccgtcacga agacgcggct
      421 tttcccgaga tcatatttgt catcaaggct gactggcttg agcgacatgg cccattctcc
      481 gcgacccgaa agcgaagggg tagctcaagt gcgcgatata gtcaccgtcc gggccgtcaa
      541 ggaggctgac atttcaacgc aagggggcaa atttggtgca tatgattgat aataagtgga
      601 aaaatctccg ccggcgcgcc ctgaccggcc cggatcgagt cgggaaatgc cggcccggcc
      661 ccctaaccac gcagtgcgac catctggcca ccatcgacca cgatggtggt gccggcgatg
      721 aagcggccgg catcggaggc aagcaacagg agcgcaccgt cgaggtcgcc gtcctggccg
      781 aagcggccgg ccggaatctc gcgtttaagt ttatcgccgg cctcgctcgc cagatagtgg
      841 cggttgagat cggtcacgaa ccagccgggc gcgatagcgt tgacgcgaat gcccttaaaa
      901 gcaagttcaa ggccgagcgc cttggtcatc tgcaccaccc cggctttggc ggtcgtatag
      961 gccaccaccc ccttcgcgac accgaagccc agcaccgagg cgatattgac gatggctccg
     1021 ggcttgccgg ctgccaacat gcgcctcgcc gcctcctggg cgcagaagaa aaccgcatcg
     1081 aggttggtcc cgagaacctg tcgccactcc gcttccggca tgtcgacggc gcgattcgca
     1141 tgcgccaccc cggcattatt aatcaagatg gtgatggtgc cgaatgccgc ctcgacagcg
     1201 tcgaacgcgc ggttcatggc ggcgcgatca agcacgtcag cgtcgaccgc agcagcgcgg
     1261 ccgcccgccg cctcgatccg ggcactcacc tcagtgagcc gatcccggcg ccgcgccacc
     1321 aacccaacgg ccgcaccgtt tgccgccagc accgcggcaa accgagcccc aaggccgctc
     1381 gatgcgcctg tcaccagcgc cacccggcca tgaaggttga acaattcgga tgctttcatg
     1441 ccgatgaccg cctttggaaa acgcagcgat tttgcgtagc gcgaaaaatg cctatatgag
     1501 ggcgaaactt tggagtgttt gcatgaccga cacggttccc gccgaaaaga tccctgtcac
     1561 ggtcctaacc ggctatctgg gggccggcaa gacgacgctg ctcaatcgca tcttgtcgga
     1621 accgcatggg cagaaatacg ccgtcatcgt caacgagttc ggcgaattgg gcatcgataa
     1681 cgacctgatc gtgggtgctg atgaagaaat cttcgagatg aacaacggct gtatctgctg
     1741 cacggtgcgg ggcgacttga tccgcatcat ccaaggcctg atgcgacgca aggggaagtt
     1801 cgacgccatc attgtggaga ccacggggct cgctgacccg gcgccggtcg cccagacctt
     1861 cttcgtggac caagagatcg gtcgcaaggc gaagctcgac gcagtcatca cggtcacgga
     1921 tgccaagtgg ctcaaggacc ggttgcgcga cgctccggag gccaagaacc aaatcgcatt
     1981 cgcagacgtg attctgatca acaaaacgga cctcgtgggc gacgcggacc tgcgggagat
     2041 cgaagcacgt atccgcgcca tcaatccgta cgcgaggctt catcacacgc aacgctgcgc
     2101 aataccgctc gccgaagtgc tacaccgcaa cgccttcgat ctcgaccgca ttctcgatgt
     2161 cgagccccag tttctggaag cgggcgacga ccacggtcat caccacgatc acgccgacgg
     2221 ccaccatcac gatcacgaac atggtgggct caagcactac cacgacgagg acatgcaatc
     2281 gctgtcgctc aagatcgaca aggcgctcga tcctgacaag ttctttcctt ggatccagaa
     2341 tctggtagcc caggagggca aaaacattct gcgcaccaaa ggtatcctgg cgtttaagga
     2401 cgatccgaaa cgcttcgcct tccagggcgt ccatatgatg ctggacggcg accatcagcg
     2461 cgactggcgc gatagcgaaa aacgcgaaag ccggatcgta ttcatcggtc gcgaattgcc
     2521 ccagagcatg atccgtaaag gtttcgagga atgcgtggcg tgatgccgac attcgcgacc
     2581 tctgaagaat catgcccggc cttgtgccgg gcatccacgc ctttagcgcc gcgcacgctc
     2641 gaacatgcag atggccagga caagcccggc catgacggcg ttgcagcctg tcgtaccagc
     2701 ccaagcgtgc ccgatggcaa ccgctgacac gccgtccgtc gttgatcgga cgcgagttgt
     2761 tgccacagaa gcgccggtgg tcggcgtgta ttttctcggc tctaccgctg tcttcgtgct
     2821 tggcgacgaa gcccttctat tcgcggcccg tgaaccccaa cgcatcacgg ttcatagtgg
     2881 cggtattctg gcggcggtgt gcgacggcga gcgtatcgtg acgggcggcg atgacggcaa
     2941 ggttgtggcg accaaggcag atatgacgct agtcgccatt ggggccgatc ccaaacatcg
     3001 ctggatcgat cacgtggcca tcgcgccgga tggtacggtc gcctggtcag ccgggcgaga
     3061 cgccttcgtg caatttcgca aaggcgagcc acgcaaactt gaagcgccgt cgaccgtcgg
     3121 cgggctcgcg tttgcgccca agggcttgcg gcttgcgatt gcgcactacc atggggtaac
     3181 gctgtggttt cccaatgccg aggcgccgcc ggaacggctg gaatggaagg gctcccacct
     3241 cgacgtaacc ttcagcccgg atggacgcta tctggtcacc gccatgcagg agccgacact
     3301 ccatggctgg cgcctggtcg agggcaggca catgcgcatg gctggctact ctgccaaagt
     3361 tcgctcgatg gcatggacag ctgacggcaa agcgctggca acgtccggag cgccccaact
     3421 cgtcgtatgg ccgttcgcca gtaaggacgg gccaatggga aaagagccac agatgctggc
     3481 gcccaacgag catcccgtct gcgtggtggc ctgccatccg cagaaagagg tgacggcggt
     3541 cggttatgag gatggcttgg tgcttcttgt ccgcatgacc gatggcgccg aggttctggc
     3601 gcggcggtcg gacggagtgc ccgtatcggc cttggcgtgg aatgccagag gcaccgcgtt
     3661 ggcctttgga accgagaatg gccaaggggg cgtcgtcgat ctcacctgag atgggaaatc
     3721 gcaacggtaa gatcggtctg agcgctgacg tggacctcat cggcttccga ctatacattg
     3781 agcttgacgc cgccgctcat cgggcacctt gtccgggtgc aattggtgcg aaagagtagc
     3841 ggcgtgaggc caggaactga acaatgatcg cagcgcaacg ctcaaggagc cgcgcatgac
     3901 ccccgccgaa ccgaagatcg tcaaatccgc ctcccgggag gcacgggcat cgtttcgctg
     3961 ggacgacccg ttgcgcttcg acgatcaatt gactgaggac gagcggctga tccgcgacac
     4021 cgcgcgatcc tatgcgcagg ataaattgct gccgcgcgtc atcgacgcct acttggagga
     4081 gaaaaccgac cgcacgatct tcaatgagat gggcgcgctg ggacttttgg gcgtgaccat
     4141 cccggaaacc tatggcgggg cagaagccag ctatgtctcc tacgggctgg ttgcgcgcga
     4201 gatcgagcgg gtcgattccg gtttccgctc gatgatgagc gtgcagtctt cgctcacgat
     4261 gtatccgatc tacgcttacg gagacgagac gcagcgcaag aaatatctgc ccaaactcgc
     4321 gactggcgaa tgggtgggct gtttcggact aaccgaaccc gatgcgggtt ccgacccggc
     4381 cggcatgaag acatacgccg aaagagtttc cgacggttac aggctgaccg gaacgaaaac
     4441 gtggattacc accgcgccgc tcgccgacgt gttcgtgatc tgggcaaagt cggctgcaca
     4501 tggtgacgac atccgcggct tcgttctgga aaagggcatg aaggggctgt cggccccgaa
     4561 gatcggcggc aagctgtcgt tgcgcacgtc gaccaccggc gaggtggtga tggacggcgt
     4621 ggtggtgccg gagtcgagtc tcttgcccaa tgtgtcaggt ctcaagggcc cgttcggctg
     4681 cctgaaccag gcccgctacg gcatcgccat gggggtgatg ggcgcggcgg aagactgctg
     4741 gcatcgggcg cggcagtaca cgctcgatcg caagcagttc ggccggccgc tggcggcgac
     4801 gcagctggtg cagaagaagc tcgccgacat ggagaccgag atcgcgctgg gcttgcaggc
     4861 gagcttgcgg gtcggccggc tgatggacga gggcaagatg gcgccggaga tgatctcgat
     4921 cgtcaagcgc aacaattgcg gcaaggcgct cgacatc
//
LOCUS       DATILV010000224         1560 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_54551, whole genome shotgun sequence.
ACCESSION   DATILV010000224 DATILV010000000
VERSION     DATILV010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1560
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54551"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..414)
                     /locus_tag="VLJ17_05185"
     CDS             complement(<1..414)
                     /locus_tag="VLJ17_05185"
                     /inference="COORDINATES: protein motif:HMM:NF018979.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HSV22407.1"
                     /translation="MKREIIGCTFWLLFSFYFAIESYRLGLSMAHRPGPGFFPFIATV
                     GIGLIAAWRLIANVRNGAPDDSADAGMRDELGLVACVIAGIIAYAVLLDTLGFLVCTF
                     LLVAFYLKVIAARRWLVSLSFAATVALAAHSFFDVL"
     gene            complement(779..>1560)
                     /locus_tag="VLJ17_05190"
     CDS             complement(779..>1560)
                     /locus_tag="VLJ17_05190"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HSV22408.1"
                     /translation="TASADQIVLSAGVYHSPQILMLSGIGPRAELERHGIAVAHTLEG
                     VGENYQDHPVITMTFKAKTGGLKSAPRGRSTLKLYFKSDPARACLDFHIILREVTNVA
                     GLGDMISFSCHLLEQTNRGRLSLASADPSDLPVIDPQMLEHPKDIQAMVSAMKFVQKL
                     ADTEPLNHYCGELFSPAPDEDWAKFARSSYTSYFHGVGTCKMGPVSDRTAVVDQHLRV
                     HGMDNLWIGDASIMPTVAHANTNLTCMMIGERAADFIKTYS"
BASE COUNT          363 a          443 c          448 g          306 t
ORIGIN      
        1 caacacgtcg aaaaaggaat gcgccgccag cgctaccgtt gccgcaaagc tcaggctcac
       61 aagccaacgg cgcgccgcga tgactttcaa gtagaaggcg acgagtagaa acgtgcagac
      121 caaaaatccc agagtgtcga gcaacaccgc atatgcaatg atgccggcaa tgacgcaggc
      181 gaccaagcct aattcgtcgc gcatgccagc gtcggcggaa tcatccggcg ctccgttgcg
      241 cacgttcgcg atcaagcgcc atgccgcgat caggccgatc ccgacggtgg caatgaacgg
      301 gaaaaatccg ggcccgggcc gatgggccat gctcaagcca agccgatagg attcgatggc
      361 aaagtagaac gagaaaagca gccaaaaggt acagccaatg atttctcttt tcatccagaa
      421 ttccgcggtg gaaagccaag tcgtgagcta tgtcctgttg tcaaagttcg gacaataaat
      481 cagtgagccc ccgccgtcat acccgcgaaa gcatgtcctg agtgcggtcg aagggcgggt
      541 atctggtagg ggcgggtttc aaacccgccc ttacatctgg attccggctc gcgcaacccc
      601 ggactgtgat ccggggttgc ccggaatgac gatgcacttt tgttgcgaac ttcggttgca
      661 cgacactaaa gcctttttac acgatctcgc gctcagggcg aacggatttt agttgctcaa
      721 atcgagactc tccgccaact ctcactctca acgtcgctaa tccgcattca tggcggagtt
      781 acgaatatgt tttgatgaag tcggcggcac gttcgccgat catcatgcag gtgagattgg
      841 tattggcgtg ggcaacggtc ggcatgatcg aagcgtcgcc gatccagagg ttatccatac
      901 cgtggacgcg cagatgttga tcgaccaccg ccgtgcggtc ggacaccggg cccatcttgc
      961 aggtgccgac gccatgaaaa tagctcgtgt aactggagcg cgcgaacttg gcccagtctt
     1021 cgtccggtgc cggcgaaaac agctctccgc aatagtgatt caacggctcg gtatcggcga
     1081 gcttttgcac gaacttcatc gccgatacca tggcctgaat gtccttggga tgctctaaca
     1141 tttgcggatc gatgactggc aagtcactcg gatcggcact ggcgagcgac agccgcccgc
     1201 gattggtctg ctccaataaa tgacacgaga acgaaatcat atcgcccaaa cccgccacgt
     1261 tcgtgacttc gcgcaagata atatggaagt cgagacaagc gcgagcgggg tcgctcttga
     1321 aatacaactt gagcgttgag cggccgcgcg gcgcggactt gagaccgccg gttttcgcct
     1381 tgaacgtcat cgtgatcaca ggatggtctt gataattttc tcccacgcct tccagggtat
     1441 gggcgaccgc aatcccgtgc cgttcgagct cggcgcgcgg gccgatgccc gaaagcatga
     1501 ggatctgcgg ggaatgataa acgcccgcgc tgagcacaat ctgatccgcc gaggcggtga
//
LOCUS       DATILV010000225         1543 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1077485, whole genome shotgun sequence.
ACCESSION   DATILV010000225 DATILV010000000
VERSION     DATILV010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1543
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1077485"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..399)
                     /locus_tag="VLJ17_05195"
     CDS             complement(<1..399)
                     /locus_tag="VLJ17_05195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22409.1"
                     /translation="MNHQDRPAATTYGAWNPGLESELPREYLPLATMFRAENVATSVA
                     KACELRDYCGLPAHELVAFRPERLIVHELLVRVTSDLHVPDGSDYEDLGRNFRRIAST
                     ILDQHITPHRAQLTELFERLRSSALALIARE"
     gene            572..844
                     /locus_tag="VLJ17_05200"
     CDS             572..844
                     /locus_tag="VLJ17_05200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007752652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HSV22410.1"
                     /translation="MIKGFKHKGLQELFERGTTAKVQKTLHARCLRRLDALKDATRPE
                     DLNLPGFDFHALKGGRRYTVHVNGLWCIIFEFADGDADRVDLEQYH"
     gene            857..1171
                     /locus_tag="VLJ17_05205"
     CDS             857..1171
                     /locus_tag="VLJ17_05205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008138713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antitoxin"
                     /protein_id="HSV22411.1"
                     /translation="MATKVSTRAPTHPGAILREDVLPAIDMPVSEVAKALGVSRQQLH
                     RILAETAPITPEMALRIGKFCGNGPDLWLRMQATCDLWHARQNLADKLNRIPTAKAKA
                     AA"
     gene            1337..>1543
                     /locus_tag="VLJ17_05210"
     CDS             1337..>1543
                     /locus_tag="VLJ17_05210"
                     /inference="COORDINATES: protein motif:HMM:NF025390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4240 domain-containing protein"
                     /protein_id="HSV22412.1"
                     /translation="MDESSFWEIVERVHDQSGGDMDEKREAIKNAIATLPKEEAEAFC
                     HLFDATMDKAYTWPLWGAAYVINGG"
BASE COUNT          334 a          439 c          470 g          300 t
ORIGIN      
        1 ctcccgcgcg atcagcgcca gagctgagct ccgcaggcgc tcgaacagct ccgtcaattg
       61 ggcgcgatga ggcgtaatat gctggtcgag aatggtcgaa gcgatgcgac gaaaattcct
      121 gccaaggtcc tcatagtcgg acccgtcggg cacatgaaga tcgctggtta cgcgaaccag
      181 cagctcatgg acgatcagcc gctcggggcg aaacgcgacg agttcgtgag caggcagacc
      241 gcaatagtcg cgcagctcgc aggctttggc cacgctggtc gcaacgttct cggccctgaa
      301 catcgtcgca aggggcaaat actcgcgcgg cagctccgat tccaagcctg gattccaagc
      361 gccgtacgtc gtggcagcgg gtcggtcctg atggttcacc gaggcatcct catacccatg
      421 gtaccgagat atgcgtgaac gagccttcca gcgcggcgtc ggtcatcgtc gagtgtcatt
      481 gttccccaag ggtcgatttg taggtcaccg ccggcggtag cgcgtgagtg gtatcttgac
      541 ggactgtaac ttaatatgtt acacatcgtc aatgatcaag ggcttcaagc ataagggcct
      601 gcaagagctg ttcgaacggg gcacgacagc gaaggttcag aagaccttgc atgcgcggtg
      661 tctgcggcgg ctcgatgctt tgaaggacgc gacccgcccc gaagatttga atctgcccgg
      721 cttcgacttc catgccctca agggcggccg gcgctacacg gtccacgtca acggcctgtg
      781 gtgcataata ttcgaattcg ccgatggcga tgccgatcgc gtcgatcttg agcaatacca
      841 ctgaggaact taatctatgg cgacaaaagt ctcgacccgc gcgcccacgc atccaggcgc
      901 gattcttcgt gaggacgttt tgccggcgat cgatatgccg gtctccgagg ttgccaaggc
      961 gcttggcgtg tcgcgccagc agctacaccg cattctcgcg gagactgcgc cgatcacacc
     1021 agagatggca ctgcgtatcg gcaagttttg cggcaatggt cctgatctgt ggctaaggat
     1081 gcaggccacg tgcgacttgt ggcatgcgcg gcaaaatctc gcggacaagc tcaatcgtat
     1141 cccgaccgca aaggcgaaag cggcggcgtg attttcaaac caggtcgcga aatggtcctt
     1201 gccccaaaga ggcgacacag atcaggcgac cttcgagccc ggcaaaagtg gctcgcccca
     1261 attccggcat aagccggaat acagcggccc cactcagtcg tggccgtatc ggcggccggc
     1321 ttaggaggag acttccgtgg acgaatcgag tttttgggag attgttgagc gcgtgcacga
     1381 tcaatcaggt ggtgacatgg acgagaagcg cgaagcaatc aagaacgcga ttgcaacgtt
     1441 gcccaaggaa gaagccgaag ctttctgcca cctctttgat gcgacgatgg ataaggccta
     1501 tacgtggcca ctctggggtg ccgcttatgt catcaacggt ggc
//
LOCUS       DATILV010000226         3382 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2612360, whole genome shotgun sequence.
ACCESSION   DATILV010000226 DATILV010000000
VERSION     DATILV010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3382)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3382)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3382
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2612360"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(120..1094)
                     /locus_tag="VLJ17_05215"
     CDS             complement(120..1094)
                     /locus_tag="VLJ17_05215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007590887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone oxidoreductase"
                     /protein_id="HSV22413.1"
                     /translation="MAKAVRVHKVGGPEALVYEDVDVPAPGPGEIRIRQHAVGLNFID
                     VYFRTGLYKAPGLPFIAGNEAAGEVLAVGAGVTNFHPGDRVAYYTSLGGYSSERNMPW
                     EKLVKLPDHITYEQGAVLMLKGLTVWYLLHKTFRVEPHHRVLIHAAAGGIGLLACQWA
                     SALGAHVIGTVGSKAKADLALANGCDHVILYNEEDFVARVKQISRNELCDVVYDGVGK
                     STFPGSLSCLKPRGLFVSFGNASGPVPPFAIAELNNHGSLFATRPKLNDYIGKRSDLL
                     EGADTLFAAVINGKLHVPINHAYALKDAAKAHVDLESRATTGASILKP"
     gene            complement(1189..1920)
                     /locus_tag="VLJ17_05220"
     CDS             complement(1189..1920)
                     /locus_tag="VLJ17_05220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007590885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HSV22414.1"
                     /translation="MIELLTSTEAWAALLTLTALEIVLGIDNVIFLSVIVSGIPPAQA
                     KQARQIGLALALVFRILLLSILVWLIGLTEAVFTVSGSPFSWRDIILIGGGLFLIAKA
                     THEIHNEVEVSDETNGENRRSSAFFLVIVQIIIVDMVFSLDSIITAIGMAQDLAIMIT
                     AVIIACIVMYVASGPVARFVGEHPTTKMLALAFLVLIGVALVADGFKFHIPRGYIYFA
                     IAFSAAVEFFNVLAKRNRKKPTLTN"
     gene            complement(1917..2648)
                     /locus_tag="VLJ17_05225"
     CDS             complement(1917..2648)
                     /locus_tag="VLJ17_05225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HSV22415.1"
                     /translation="MDHATRQDSSHAPLLRAAAFSVHIFTALGAGVALIALLEAVREH
                     WAAMFWWLGAALVIDGLDGPVARRLDVVHLQPNWSGDVLDLVVDFVTYVFVPAYAITA
                     SGLLLPIAAPFLGIGIAVSGALYFSDRRMKSTDNHFRGFPGLWNIAAFYLFLLRLPPV
                     WSSLAVAILIVLTFVPFHVIHPVRVVRLRWLTLSLIGAWTALAMVALTNDFQAGTAVN
                     LALCAIAVYVVGCDAAIRFVRSLNT"
     gene            2801..>3382
                     /locus_tag="VLJ17_05230"
     CDS             2801..>3382
                     /locus_tag="VLJ17_05230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018457925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSV22416.1"
                     /translation="MNDASIAYDVVVVGGGPAGLACAIALAQTGARTALIARRAHYAD
                     NRTTALLDGSIDFLQALQVWPRCKDNAAALRVMRLVDDTGRLIRAPEVRFCCEEIGLD
                     VFGYNIENRVLVSALEERAAELSNLTRFDDDAATVAPEDRLVAIHLVGGGSLFALLAV
                     GADGRQSLCREAAGIGVKRRELHQTALTFNVSHS"
BASE COUNT          708 a         1013 c         1050 g          611 t
ORIGIN      
        1 tcgtcatgca caggcttggc agaggatccc gaacaacacc gtatgcttcg agatcatgcc
       61 ggacgacttg gagtcgctta gcggcaaatg gcgcgatctc tggcacagcg tgaggtgggt
      121 cacggcttga ggatcgaggc acccgtcgtc gcccggcttt ccagatcgac atgggccttg
      181 gcggcgtcct tgagcgcata ggcatggttg atgggcacat gcagtttgcc gttgatgacg
      241 gcagcaaaca gcgtgtcggc gccttcgagc agatccgagc gcttgccaat gtagtcattg
      301 agtttgggcc gggtcgcaaa caacgagccg tgattgttga gttcggcgat cgcgaacggc
      361 ggcaccggcc ccgacgcgtt accaaaactc acgaacaggc cgcgcggctt gaggcaggac
      421 agcgagccag gaaaggtcga cttgccgacg ccgtcataga ccacgtcgca tagctcgttc
      481 cggctgatct gtttgacgcg cgcgacaaaa tcctcctcat tgtagaggat gacgtgatcg
      541 cagccattgg ccagcgcgag gtcggccttg gccttggagc cgaccgtgcc gatgacgtgt
      601 gcccccagcg cgctcgccca ttggcaagcg agcaggccga tcccgccggc cgcggcgtgg
      661 atcaataccc gatggtgcgg ctcgaccctg aaggtcttgt gcaggaggta ccagaccgtc
      721 agtcccttca gcatcaacac cgcgccctgc tcgtaagtga tgtgatcggg cagtttgacc
      781 agtttttccc agggcatgtt acgctcgctg gaatagccgc cgaggctggt gtagtaggcg
      841 acgcgatcgc cgggatggaa attcgtcacg ccggcgccta cggcgagtac ctcgccggcc
      901 gcttcattgc cggcgatgaa cggcagcccc ggcgccttgt agagaccggt gcgaaaatag
      961 acgtcgatga agttcagccc gacggcgtgc tggcggatgc gtatctcgcc ggggccgggc
     1021 gcgggcacgt caacgtcttc gtagaccagg gcctccgggc cccctacctt gtgcacgcgc
     1081 acggccttgg ccatcttgcg gtcctctccg gcatttttca cccaaggtga gcgaaagcca
     1141 tcaaggccgc aatgtcaact cgttgatctc aagcgcgtcg cgttagaatc aattggttaa
     1201 cgtcggcttc tttcggttac gcttggcaag aacgttgaag aattcaaccg ccgcggaaaa
     1261 cgctatggca aaatagatat agccgcgcgg aatatggaat ttgaacccgt ccgccaccag
     1321 cgcgacgccg atcaacacca gaaaggcgag cgccagcatc ttggtggtag gatgctcccc
     1381 gacaaatcgt gccaccggac cggacgccac atacatcacg atgcaggcga tgatgaccgc
     1441 tgtaatcatg attgccagat cctgggccat gccgatcgcg gtgatgatcg agtccagtga
     1501 aaacaccatg tcgacgatga tgatctggac gatcaccaag aaaaacgccg acgatcttcg
     1561 gttctcgccg ttcgtttcgt cgcttacctc cacctcgttg tgaatttcgt gggtcgcctt
     1621 tgcgatcaaa aacagaccgc cgccaatcag gatgatgtcg cgccaggaga atggtgagcc
     1681 gctcacggta aagacggctt cggtgagacc gatcagccat accagaatgc tgagcaacag
     1741 gatccggaat accagcgcca gcgccagccc gatctgccgc gcctgcttcg cctgcgccgg
     1801 cgggatgccg gagacgatga ccgacaggaa gatgacatta tcgatgccga gaacgatctc
     1861 gagcgccgtc agcgtcaaca gcgccgccca cgcttcggtg ctggtcaaca actcgatcat
     1921 gtgttgagcg atcggacgaa ccggatggcc gcgtcgcatc cgaccacgta gacggcgatt
     1981 gcgcagagcg ccaggttgac ggcagtgccg gcctgaaaat cgtttgtcaa cgccaccatc
     2041 gcgagtgccg tccaggcacc gatcagggat aacgtcaacc agcgcaggcg cacgacccgg
     2101 accggatgaa tgacatgaaa cggaacgaag gtcagaacga tcaggatggc gacggcaagg
     2161 ctcgaccaga ccggtggcaa gcgaagcagg aacaaataga aagccgcgat gttccacaag
     2221 ccgggaaagc cgcgaaagtg attatcggtg gatttcatgc ggcgatcgga aaaatacagc
     2281 gcgccggaaa cggcgatacc tatgcccagg aagggcgctg cgatcggcag caacagaccg
     2341 ctggcggtga tggcgtaagc cggcacgaag acgtaagtga cgaaatcgac cacgaggtcg
     2401 agcacgtcac ccgaccaatt gggctgcaga tgcaccacgt ccagccggcg cgcgaccgga
     2461 ccgtctagcc cgtcgatgac gagagctgcc ccgagccacc agaacattgc agcccaatgt
     2521 tcgcgtaccg cctcaagcaa ggcgatcagg gcgacgccgg cgcccaacgc ggtgaaaata
     2581 tgcactgaaa atgccgccgc gcgcagcagc ggcgcatgag aggaatcctg cctggttgcg
     2641 tgatccatgt tgactgctgg tcgccgggtt ccggtcagtg ctatcagaaa tcgccgtcat
     2701 ttgtacatgc gcagttgtcg cgctttctga ctgccgtttg ttgaaaagcc ggccgggcga
     2761 cgggcttgaa attgccgccg ggaatgtcat ctgttctgat atgaacgacg catccatcgc
     2821 ctatgacgtg gtcgtggtcg gtggcgggcc cgcgggactc gcctgcgcga ttgcgttggc
     2881 gcagaccgga gcgcgcacgg ccctgattgc caggcgtgcg cactacgccg acaaccggac
     2941 caccgcgctt ctggatggtt cgatcgattt tctgcaggca ctgcaagtct ggccgcgctg
     3001 caaggacaac gccgcagcct tgcgcgtcat gcgtctcgtc gatgacaccg gccgtctgat
     3061 ccgggcccct gaggtgcgct tttgctgcga ggagatcggg ctcgacgtgt tcggctacaa
     3121 catcgagaac cgcgttctgg tatcggcact ggaagaacgc gccgccgagc tttcgaacct
     3181 gacgcggttc gacgacgatg cggccaccgt tgcccccgaa gacaggttgg tggcgattca
     3241 cctcgtcggt ggcggatccc tttttgctct gctggcggtc ggcgctgacg gacggcagtc
     3301 gctttgccgt gaggctgcgg gcatcggagt caaacgtcgg gaactccatc agaccgcact
     3361 gaccttcaac gtcagccact cg
//
LOCUS       DATILV010000227         2625 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_54925, whole genome shotgun sequence.
ACCESSION   DATILV010000227 DATILV010000000
VERSION     DATILV010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2625
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54925"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..103
                     /locus_tag="VLJ17_05235"
                     /pseudo
     CDS             1..103
                     /locus_tag="VLJ17_05235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010875348.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
     gene            complement(128..2200)
                     /locus_tag="VLJ17_05240"
     CDS             complement(128..2200)
                     /locus_tag="VLJ17_05240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004675975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HSV22417.1"
                     /translation="MTSAEVIPAVVLKRKAVVYVRQSTQSQVMTNLESKRRQYDLVDV
                     ARQRGFVDVEIIDDDLGRSASGTVARPGFDRLVAWLCAGKVGAVLCFDASRLARNGRD
                     WHHLLELCGLVEARIIDLDGVYNPCRPNDRLLLGMKGSISEFELGVLRARMLDAARSK
                     ASRGELRLSVPFGYIWHREAGLGLDPDLRLQEVIRIIFTRFRELGSARQVLLSMKADQ
                     IHFPRPSDEGRMTSFDWVPIRYRNVIAVLKNPFYAGVYVYGKSEKRTSIVEGRARRSY
                     GHGKPIGTWEVMIKDHHEGYIGWAEYERNQKQLALNNYGRAGGAKSGRGGRALLSGMM
                     TCGRCGRRLSVAYTGNPQSRPVYRCDKPNLMMGLPRCMTFGGPRVDAAIARELLQAVE
                     PMAIEAAFEAERMHREQQEDQQRIIDLEMQQARYEASLAERRYAACDPDNRLIAAQLE
                     KNWEAALRRVRDLETRQPAERPSDVKVDPSAFTNLADNLSTAWNAPGVTMRARQQLLR
                     TLITEIVVDVDDDARDVVLTIHWRGGQHSELRVHKPRTGEHGCATTEDALAVMRSMAG
                     RWSDEHIAASLNRMGLPTGQGKTWTAHRVASVRRVRGIHAYRSAEKDGEWLTMTEAAK
                     VLGVTNHAIRRLIKAGVLPAVQVVPGAPHQIRADDLASEPVKTAVARNGRQCRVVDAD
                     TLPMFTDT"
     gene            complement(2187..2366)
                     /locus_tag="VLJ17_05245"
     CDS             complement(2187..2366)
                     /locus_tag="VLJ17_05245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018268642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22418.1"
                     /translation="MKSLRLPAAAPSRQMNFLFDNSRLEGVASVERDKIISVLAQILM
                     QAAGLSVEELEDDQR"
BASE COUNT          488 a          836 c          772 g          529 t
ORIGIN      
        1 ctacatgctc aagcgctggg acggcttcgc ccgcttcgtc catgacggcc ggatttgtct
       61 gaccaacaat gcggcggaaa gagcgctgcg aagtttggcg atgcgcgagt cattatgcac
      121 tccctcgtca agtgtctgta aacattggaa gcgtgtccgc gtcgacaacg cgacactggc
      181 gaccgttccg ggccaccgcc gttttgaccg gctccgacgc caggtcgtcg gcacggattt
      241 gatgcggtgc gccgggaaca acctgcacag ccggaaggac gccggctttg ataaggcgcc
      301 gtatcgcgtg gtttgtgacg cctaacacct ttgccgcttc ggtcatggtg agccattcgc
      361 catctttttc cgcggatcga taggcatgga ttccacgcac gcgtcgaacg gaagcgacgc
      421 ggtgcgccgt ccaggtcttg ccttggccgg tgggcaagcc cattcggtta agcgacgcgg
      481 cgatatgttc gtcagaccag cggccggcca tgctgcgcat gaccgccaaa gcgtcttcgg
      541 tcgttgcgca accatgttca ccggtccgtg gcttatggac gcgcagctcg gagtgctggc
      601 caccacgcca atggatcgtg agcacgacat cgcgcgcgtc atcatcgaca tcgacgacga
      661 tctcggtgat caatgtccgc agcagttgct ggcgggcacg cattgtaaca cccggtgcat
      721 tccacgccgt tgatagattg tccgccagat tggtgaaggc gctgggatcg accttgacgt
      781 ctgatggcct ttcagcaggc tggcgtgttt ccagatcccg gacccgccgg agcgcggcct
      841 cccagttctt ctccaactgt gcggcaatga gacgattgtc aggatcgcag gcggcgtagc
      901 gacgctcggc caggcttgcc tcgtagcggg cctgctgcat ttccaagtct atgatgcgtt
      961 gctgatcttc ctgttgttcc cggtgcatcc gctccgcctc gaacgcggct tcgatcgcca
     1021 ttggctccac cgcctgcaac aactcccggg cgatcgcggc atcaacccgc gggccgccga
     1081 aggtcatgca ccggggcaga cccatcataa ggtttggttt gtcgcagcga tataccggtc
     1141 ggctctgcgg attgccggtg taggcaacgc tcagccgccg cccgcatcgc ccgcaggtca
     1201 tcattcctga caggagtgcc ctgccacccc ggccggactt tgcacctccg gcacgaccgt
     1261 aattgttgag ggcgagttgc ttctggttgc gctcatattc ggcccagccg atatagcctt
     1321 cgtgatgatc tttgatcatc acctcccatg tcccgatcgg cttgccatgc ccgtagctcc
     1381 gccgtgccct cccttcgacg atcgaggtgc gtttctcact tttcccgtac acgtaaaccc
     1441 ctgcgtaaaa gggattcttg agaaccgcga tgacgttgcg gtagcggatc ggcacccagt
     1501 cgaagctggt catgcgacct tcgtcggagg gccgcgggaa gtggatctga tcggctttca
     1561 tcgagagcaa cacctggcgc gcgctgccga gctcgcggaa gcgcgtgaag atgattcgga
     1621 tcacttcctg gagacgtaga tcgggatcga gaccaagccc cgcttcacgg tgccaaatgt
     1681 agccgaacgg aaccgataac cgcagctcgc cccggctggc tttggaccgg gcggcgtcca
     1741 gcattctcgc gcgcagcacg ccgagctcga actcgctgat actgcctttc atgccaagga
     1801 gcaggcgatc gtttggccga cacggattat agacgccgtc gagatcgatg atgcgggctt
     1861 cgacaagccc acataattcg agcaggtgat gccaatcgcg accgtttcgc gcgagcctgg
     1921 acgcatcgaa gcatagaacg gcgccgacct tgccggcgca tagccatgcg accaagcggt
     1981 cgaagccggg gcgtgccacc gttccgcttg ccgagcggcc gagatcatca tcgatgattt
     2041 caacatcgac gaaaccgcgt tggcgggcga catcgaccag atcatattgg cgccgcttgc
     2101 tctccaggtt ggtcataacc tgggattgcg tcgactggcg cacatacacg acagccttcc
     2161 tcttgagaac gaccgccgga atcacctcag cgctggtcat cttcaagctc ctcgacgctg
     2221 aggccggccg cctgcatgag gatctgggcc agcaccgaga tgatcttgtc ccgctcgacg
     2281 gaggccaccc cttccagccg gctgttgtcg aataagaagt tcatctgccg gctcggcgcc
     2341 gccgccggca atctcagaga cttcattgcc ttcctcccga acgattgcga catcgttccg
     2401 ggagtgtgcg gggttgaccg tacctatcaa tagccgctcc aactcgacga gtgcggccag
     2461 atcgacgcgc ggcgcgccga ttgtcattcc ggcgcaaatc acaggatcaa gcatccaacc
     2521 ggcgatcgat accacgatgc ctgccggccc ttgcacgcta agaaattggc ccgtcgatcg
     2581 ctgctccatg cgacgcacca agaccttacg gccgaaatat ggatg
//
LOCUS       DATILV010000228         4339 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1335196, whole genome shotgun sequence.
ACCESSION   DATILV010000228 DATILV010000000
VERSION     DATILV010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4339)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4339)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4339
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1335196"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..766
                     /locus_tag="VLJ17_05250"
     CDS             <1..766
                     /locus_tag="VLJ17_05250"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSV22419.1"
                     /translation="WNPPRSAQVGIAGDALLGLKALAAALPRRKPERDIDLDKVRDWA
                     NDQARVAEPQMSYIRALRAAIPDDGILVNELTQIGYLARSMYPVYQPGTFVTPGYQGT
                     LGYGFPTALGVAAGNPGRAVVSINGDGGFGWAMQELATLRKYNLNAAVVVFADGHFGN
                     VRRFQEEQFGATYEVDLRNPAFDRLAAAFDVPFARADSADALQHELSRAARDRAPILI
                     EAPVGPMSSPWGLMRLQARPGVASTGAPDLRGEPTP"
     gene            complement(776..1465)
                     /locus_tag="VLJ17_05255"
     CDS             complement(776..1465)
                     /locus_tag="VLJ17_05255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell cycle transcriptional regulator TrcR"
                     /protein_id="HSV22420.1"
                     /translation="MAIQPLMPKATAVWLVENTALTFDQIADFCKLHPLEVKAIADDE
                     GAQSIIGRDPIVAGQLTRDELAKGEADPNHRLRLAEAKVRLPEPKRKKGPRYTPVSRR
                     QDRPNAILWLVRNHPELKDSQIMRLVGTTKSTIEAIRERTHWNASNLAPMDPVTLGLC
                     SQIDLDFEVHRAAKEKPAEPEIGATLLPAEITTARPAPEPEPAAAVAKEGEELDVQAV
                     FAKLKQIGKSE"
     gene            1800..2780
                     /gene="ispH"
                     /locus_tag="VLJ17_05260"
                     /gene_synonym="lytB"
     CDS             1800..2780
                     /gene="ispH"
                     /locus_tag="VLJ17_05260"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate reductase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA];
                     GO_process: GO:0050992 - dimethylallyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HSV22421.1"
                     /translation="MSSRPSERPQLKVMLCSPRGFCAGVVRAIDTVERALAIYGKPVY
                     VRHEIVHNRYVVESLRQKGAVFVEELDEIPDADVPVIFSAHGVPKAVPVEAGRRNLLA
                     IDATCPLVTKVHREAEIHFRRGREIVLIGHEGHPEVTGTMGQLPAGAVRLVQTAEEAA
                     TFEPNDPSKLAYVTQTTLSVDDTADIVAVLQKRFPHIAGPHKEDICYATTNRQEAVKR
                     VAPVVDAMIVVGSPNSSNSQRLKEVALRNGCPHAELLQRADDINWDKFGAIGRLGLTA
                     GASAPEVLIEEIIDAFAERYEVSVETVSAVEESGIFFPLPRQVRGGEAAE"
     gene            2989..3951
                     /locus_tag="VLJ17_05265"
     CDS             2989..3951
                     /locus_tag="VLJ17_05265"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012497493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004413 - homoserine kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HSV22422.1"
                     /translation="MAVYTDVNDEELQRFLAGYPIGNLLAYKGIAEGVENSNFLLHTT
                     EGFFVLTLYEKRVAVDDLPFFLNLIEHLAARGLNCPQPVRSRSGEALGCIANRPAAIF
                     TFLDGMWIRRPNAAHCAAVGDALAKLHLAGADFGMTRRNGLSVEGWRPLFNAAGSRAD
                     KVQKGLGEAVGSELAQLERDWPRDLPQGVIHADLFPDNVFFLGDRLSGLIDFYFACTD
                     ALAYDVAICLNAWCFELDHSYNMTKGRALLNGYARMRELKAHEIAALPMLCRGAALRF
                     LLTRLVDWLEVPPGALVKPKDPLEYYRKLRFHQANVSARDYGID"
     gene            3944..>4339
                     /gene="rnhA"
                     /locus_tag="VLJ17_05270"
     CDS             3944..>4339
                     /gene="rnhA"
                     /locus_tag="VLJ17_05270"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HSV22423.1"
                     /translation="MTDERGSGRVVIHTDGACSGNPGPGGWGSILQWGEHTRELKGGE
                     AHTTNNRMELMAAIVALETLKRPCNVDLHTDSQYLRQGITSWINGWKRNGWRTAEKTP
                     VKNADLWQRLDAAVNRHTVRWHWVRGHAGH"
BASE COUNT          796 a         1315 c         1366 g          862 t
ORIGIN      
        1 atggaaccca ccgcgcagcg cccaggtcgg catcgcgggc gatgcactgc tcggactcaa
       61 ggctctcgcg gccgcgttgc cgcgtcgcaa gcccgaacgc gacatcgacc tcgacaaggt
      121 ccgcgattgg gctaacgacc aggcgcgcgt agcagagcca caaatgtcct acatccgggc
      181 gctgcgcgct gcgattccgg acgacggcat tctggtgaac gaactcaccc agatcggtta
      241 cctcgcgcgc tccatgtacc cggtctatca gcccggtacg tttgtgacgc ccggctacca
      301 gggcacgctc ggttacggat ttccgaccgc gcttggtgtc gccgccggaa acccgggccg
      361 agcagtcgtc agcatcaatg gcgacggcgg cttcggttgg gccatgcagg agctggcgac
      421 gctgcgcaaa tacaatctca atgcggcggt ggtggtgttc gccgacggcc atttcggcaa
      481 cgtgcggcgc tttcaggagg aacagttcgg cgccacctac gaggtcgatc tgcgcaatcc
      541 cgcgttcgat cgccttgccg ccgcattcga tgtgccgttc gcgcgcgccg actctgccga
      601 cgcactccag catgagctta gtcgtgccgc ccgcgaccgc gccccgatcc tgatcgaagc
      661 gccggttggc ccaatgtcga gcccgtgggg gctgatgcgg ctacaggcac gaccgggcgt
      721 cgccagtacc ggagcacccg atctccgagg tgagccgact ccgtaaacgg cacgcctact
      781 cgcttttgcc gatctgcttg agtttcgcga atacggcctg cacgtccagc tcctcgcctt
      841 ccttcgcgac ggccgcggcc ggctcgggct ccggtgcggg gcgcgcggtg gtgatctcgg
      901 ccggcagcag agtcgccccg atttcgggct cagcaggctt ttccttggcg gcgcggtgga
      961 cctcaaaatc gagatcgatc tgcgagcaaa ggccgagcgt caccggatcc ataggggcaa
     1021 gattggaggc attccaatgg gtgcgctcac ggattgcctc gatggtcgac ttggtggtgc
     1081 cgaccaagcg catgatctga ctgtccttta attcggggtg gttgcgcacg agccacagga
     1141 ttgcgttcgg gcgatcctgc cggcgcgaca ccggggtgta tcgcggtccc tttttccgct
     1201 tcggctcggg caaccgcacc ttcgcttcgg cgagccgaag ccgatggttc ggatcggcct
     1261 cgcctttggc aagctcgtcg cgggtaagtt gcccggccac gattgggtca cgtccgatga
     1321 tactctgggc cccctcatcg tctgcgatag ccttcacctc gagcggatgc agcttgcaga
     1381 aatcggcaat ctggtcgaac gtcagcgccg tattctcgac caaccaaact gcggtcgcct
     1441 tcggcataag gggctggatc gccatgataa aatctccttg tgctccgccc gcccggcggg
     1501 gcgaagcctg ttgccatcaa acatgacggg attaatccct atataagggc gccgccctgg
     1561 cttgtgcaac ccccggcaag atattgggga acatgaataa attcaggaaa gcgctgccgt
     1621 atatgcctgg gccgccgcgg tatatcaggt ccgccaactt gtctcgtcgc ctcgcaacga
     1681 aacttttgcc tttcggtgac gcgcgtgctt gacaggggca tgagcaaaaa accaaatctc
     1741 gtgggttgcg ccttcgcgca cttagtctga gtctgagctc ctggaacgaa atcgacatga
     1801 tgtcttctcg cccttccgaa aggccgcagc tgaaagtgat gttgtgttcg ccgcgcggtt
     1861 tctgcgccgg cgtggtgcga gcgatcgata ctgtggagcg ggcgctggcg atctatggca
     1921 agccggtcta tgtgcgccac gagatcgtgc ataaccgcta tgtggtcgaa agcctgcggc
     1981 aaaaaggcgc cgtgttcgtc gaagagctgg acgaaatacc tgacgcggat gtgccggtga
     2041 tcttctcagc ccatggggtg ccgaaagcgg tgccggtcga agccggccga cgcaacctgt
     2101 tggcgatcga tgccacctgc ccgctggtca ccaaggtgca tcgggaggcc gaaattcatt
     2161 tccggcgcgg ccgcgagatc gtgctgatcg ggcacgaagg ccatccggaa gtcaccggca
     2221 ccatggggca actcccggcc ggcgcggtcc gtctggtaca gaccgccgag gaggccgcaa
     2281 cgttcgagcc gaacgatccc agcaagctcg cctatgtgac tcaaacgacg ctctcggtcg
     2341 acgacaccgc cgacatcgtc gccgtgctcc agaagcggtt tccgcatatt gctggtcctc
     2401 acaaggagga catctgctac gccactacca atcgtcagga ggcggtcaag cgggtcgccc
     2461 cggtggtcga cgccatgatc gttgtcggct cgcccaattc ctcaaactcc cagcggctca
     2521 aggaagtggc attgcggaac ggttgtccgc atgccgagct gttgcagcgc gccgacgata
     2581 tcaattggga caagttcggc gcgatcggtc gactcgggct cacggcgggt gcgtcggcgc
     2641 ccgaagtgtt gatcgaggaa atcatcgacg ccttcgcgga gcgctacgag gtcagcgtcg
     2701 agaccgtgtc ggcggtcgag gaatcgggaa tcttttttcc tttgccgcgg caggtgcgcg
     2761 gcggcgaagc ggccgagtaa acccctgcaa ccgtattcgc gatcgtatcg agactacgct
     2821 ttagggcgga tcccggtcat cttgaaccca tttctccggt gtcatggccg ggctatctac
     2881 gtcttgcttg cggaatttcg gcaagaaagg catggaggcc tgcgacaagc gcgggaatga
     2941 cgccggaaag tttgattcga tctcatcgga acttgctcta ggaccgcaat ggccgtctat
     3001 accgatgtca acgacgagga actgcagcgg tttcttgcgg gataccccat cggtaacctg
     3061 ctcgcctaca agggaattgc cgaaggagtc gagaattcaa actttctact acacacgacc
     3121 gaaggttttt ttgttctcac cctttacgaa aagcgcgttg cggtcgacga tttgccgttc
     3181 tttcttaatc tcatcgagca tttagcggcg cgtgggctta actgtccgca gcctgtgcgc
     3241 agccgcagcg gcgaggcgct cggatgcatt gctaaccgtc ctgcagccat cttcacgttt
     3301 ctcgacggca tgtggatcag gcggcccaat gccgcgcatt gcgcggcggt tggcgatgcg
     3361 cttgccaagc tgcatctcgc cggagccgat ttcggcatga cgcggcgcaa cgggctgtcg
     3421 gtggaggggt ggaggccgct gtttaatgcg gcgggctctc gcgccgacaa agtgcagaaa
     3481 gggcttggtg aggccgtcgg gagcgagctg gcgcagctgg aacgtgattg gccgcgggat
     3541 ctgccgcaag gggtcattca cgcggatctg tttcccgaca atgttttttt tctcggcgac
     3601 cgcctgtccg gcctgatcga tttctatttc gcttgtacgg acgccctcgc ctatgatgtg
     3661 gcgatctgcc tcaacgcgtg gtgttttgag ctcgaccact cctacaatat gaccaagggg
     3721 cgcgctttgc tgaacggcta cgcgcggatg cgcgagctta aggcgcacga gattgccgca
     3781 ctgccgatgc tgtgccgcgg cgctgcgctg cgtttcctgc tgacccgact ggtcgattgg
     3841 ctggaggtgc cacctggcgc attggtgaag ccgaaggacc ctttggaata ttatcgcaag
     3901 ctgcgtttcc atcaggccaa tgtgagcgca cgggactacg gcattgactg acgagcgagg
     3961 aagcggccgg gttgttattc ataccgacgg cgcctgctcg ggcaatccgg ggccaggggg
     4021 ctggggcagc attttacaat ggggcgagca cacccgggaa ctcaagggcg gcgaggccca
     4081 cactaccaat aaccgcatgg aattgatggc cgctatcgtg gcgctcgaaa cccttaagcg
     4141 cccgtgcaat gtcgatctcc acaccgacag ccagtatttg cgccagggaa ttaccagctg
     4201 gattaatggc tggaaacgca acggctggag gaccgcggaa aagacgccgg tcaagaatgc
     4261 agatctatgg cagcgcctcg acgccgcggt caatcgccac accgtgcgtt ggcactgggt
     4321 gcgcggccat gccggccac
//
LOCUS       DATILV010000229         2608 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4656704, whole genome shotgun sequence.
ACCESSION   DATILV010000229 DATILV010000000
VERSION     DATILV010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2608
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4656704"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..293
                     /locus_tag="VLJ17_05275"
     CDS             <1..293
                     /locus_tag="VLJ17_05275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22424.1"
                     /translation="PEKSAILRSLPPDKLVTRTKNGQLYYVYADPAGCNCAYVGTPQA
                     YAAYQNWANIGPGGSGGQISNAMQTVESDNVGTPYIPADIGNSMDSILHPDF"
     gene            complement(426..1217)
                     /locus_tag="VLJ17_05280"
     CDS             complement(426..1217)
                     /locus_tag="VLJ17_05280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LssY C-terminal domain-containing protein"
                     /protein_id="HSV22425.1"
                     /translation="MLVILVATLAVYGLIAYIVLPLGWTHYEHQKKLAGLTMVTRTGQ
                     DIPGGPINVGLVGSKEDVLCAMHAAHWDPADPITFKSSVEIVGSVVLRRPYSDAPVSN
                     LYYDGRREDLAFEKPVGRSADQRHHVRFWEVLKQGQEGRPVWLGSATFDRDVGLSRYT
                     GQVTHHIAPDIDAERDGLTDDLKNARVVEAIYEVTGVGPKVNGRNGEGDRYYTDGEIK
                     ISRLVAGCNTKAETTVQLNNPAIVDLKNGAWKAISGILQSGAISR"
     gene            complement(1360..2595)
                     /locus_tag="VLJ17_05285"
     CDS             complement(1360..2595)
                     /locus_tag="VLJ17_05285"
                     /inference="COORDINATES: protein motif:HMM:NF017081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV22426.1"
                     /translation="MTIWHHWFASDALGIIIVAPLLIGLAQAVRDPPPRKEVFEGAVA
                     LAILTFVSGLIVLLPRELWVAVVPTALFFPLLLWVTARCRPVFAAAAAFIIALTVVST
                     TTFGIGILGDPSLPIMQRVLCAQAGLLTASLCALVLAALFAERKSNEAHLAHSNIMLE
                     RERDNKLMNVQAATATMAHEVKQPLAIISLKGEAAQQLLKRAQPDLEKVRSALVSIVA
                     NSHRASQLLNNTRALFARTDKGHDSIDVNKIALQVLRLLREQLKAHGAMVHVEFAPDL
                     PLVVGHAGQLQEVVINLLQNAIEAMRAIKGRPRMLQFRTKRHGDDAIVVEVEDSGPGI
                     DPADLNSIFDAFFTTKSHGMGLGLAICRMIIERHGGRLSASSDGTNGALFQVILPTRE
                     LHADSARALRTDNHFMTAK"
BASE COUNT          572 a          778 c          692 g          566 t
ORIGIN      
        1 caccggaaaa aagtgcgatt ctccgatcgc ttccgccaga caagctcgtg acgcgaacga
       61 agaacggcca gctttattat gtctatgccg atcccgctgg ctgcaattgt gcctatgtgg
      121 gaacgccgca ggcgtacgcg gcataccaga actgggcaaa cattggtccg ggcggcagcg
      181 gtggccagat ttcaaacgcc atgcagacgg tcgaatcaga taatgtcgga accccttaca
      241 ttcccgcaga catcggcaac agcatggaca gcattctaca tccggatttc tagcgctcga
      301 aacttattca gtgaccgacc gctttcaggt cgccatttaa ccagtcccgt cgtagtcctc
      361 tacaattggc tttattaccc ggcattcctg ccggccagtt gttccctgcg cacataccta
      421 tcaattcacc tggagattgc acccgactgc aatattccgg aaattgcctt ccaggcgccg
      481 ttcttcaaat ctacgatggc tggattgttc agctgtacgg tcgtctcggc cttcgtattg
      541 cagcctgcaa caagacgaga gatcttgatc tcaccgtccg tgtagtaccg gtcgccttcg
      601 ccatttcggc cgttcacctt tggcccgaca ccggtgacct cataaatcgc ctccaccacc
      661 ctcgcatttt tcaggtcgtc ggtgagccca tcacgctcgg catcgatatc gggtgcaatg
      721 tgatgcgtga cctgaccggt gtagcggctc aaacccacgt cacggtcgaa cgtcgcggag
      781 ccgagccaga cgggccggcc ttcttgtccc tgtttcagga cttcccagaa gcggacatgg
      841 tgccgctgat ctgcgctgcg cccaaccggc ttttcgaacg cgagatcttc gcgccgcccg
      901 tcgtaataga gattgcttac gggtgcgtcg ctgtacggcc tgcgcaggac aacgctgcca
      961 acgatctcca cactcgactt gaacgtaatc ggatctgcgg gatcccagtg tgccgcgtgc
     1021 atggcgcaga gtacgtcctc tttgctgccg accaggccga cattgatcgg accgcccgga
     1081 atatcctggc ccgtgcgcgt gaccatcgtg aggccggcaa gctttttttg gtgttcataa
     1141 tgcgtccagc ccagcggcag cacgatatag gcgatgagcc cataaacggc gagagtagct
     1201 accaaaatta cgaggatgac tcacaatctt gagcggtggc gtcccatcag gtgttcgccc
     1261 gaaatctcaa cgactttggc gcgctttcag ctgttatcct aagcactgca acagaaaggc
     1321 agtctcgcag cggcatctcc aaatccaatt tggtcgccgc tacttcgccg tcatgaagtg
     1381 attgtccgtg cgcaatgcgc gagcgctatc cgcgtggagc tcgcgcgtgg gcagaatgac
     1441 ctgaaatagc gccccgtttg tgccgtccga cgacgccgaa agccgcccac cgtgacgctc
     1501 gataatcatg cggcaaatgg ctagtcccaa tcccattcca tgcgatttcg ttgtaaaaaa
     1561 tgcatcaaat atgctgttca ggtctgccgg atcaattccc ggccctgagt cctcgacttc
     1621 aacaacaatt gcatcatcgc cgtggcgctt cgttctaaac tgcagcatcc tggggcgacc
     1681 cttgatggct ctcattgctt caattgcatt ttgaagaagg tttatcacga cctcctgcaa
     1741 ttgacccgca tggcccacga caagcggtag atcgggcgca aattcaacgt ggaccatagc
     1801 accgtgagct ttcaactgtt ctcgaagaag gcgcaacacc tgcaaagcaa ttttgtttac
     1861 gtcgattgag tcgtgtcctt tatcggttct cgcaaacaag gcacgggtgt tattcaatag
     1921 ctggctggca cgatggctgt tggcaacgat gctaaccaaa gctgaccgca ccttttcaag
     1981 gtcgggttgc gcacgcttca gaagctgttg tgccgcttcg cccttcaatg agatgattgc
     2041 gaggggctgc ttgacctcgt gagccatcgt ggcagtggcc gcctgcacat tcatcaattt
     2101 attgtcccgt tcgcgctcca gcatgatgtt cgagtgagcg aggtgagcct catttgactt
     2161 tcgctctgcg aacaacgcgg caagaaccaa tgcgcagagc gatgccgtca ggagaccggc
     2221 ttgagcacac aggacccgct gcataatcgg caggcttgga tcaccgagaa tgccaatgcc
     2281 gaacgtggtc gtcgaaacga ccgtcagcgc aatgatgaat gcggccgccg cggcgaagac
     2341 cggtctgcag cgcgcggtaa cccacagcag cagcgggaag aacaatgcag ttggcaccac
     2401 ggccacccat agctcccgtg gcaatagaac aatgagtccg ctcacgaagg tcagtatggc
     2461 caatgccacg gcgccttcga aaacctcttt gcgtggcggc ggatcgcgca ccgcttgagc
     2521 cagtccgatc aggagcggcg ctactatgat aataccaagc gcgtcggacg caaaccaatg
     2581 gtgccagatc gtcaaaacag ccgcaggc
//
LOCUS       DATILV010000230         6839 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_825575, whole genome shotgun sequence.
ACCESSION   DATILV010000230 DATILV010000000
VERSION     DATILV010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6839)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6839)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6839
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_825575"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(24..497)
                     /locus_tag="VLJ17_05290"
     CDS             complement(24..497)
                     /locus_tag="VLJ17_05290"
                     /inference="COORDINATES: protein motif:HMM:NF042488.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6644 family protein"
                     /protein_id="HSV22427.1"
                     /translation="MAWLEGSTLGHVMRDNGVWFYGIINLTHIIGVATLFGSVVILDL
                     RLLGFWPDAPLAAISRPTTRMAAPGFGIAAVSGAGLLATKATEYVGNPFLYAKIPAIG
                     LALLNVFFVHRSSAWRAHQNRDLTHTERRRLAAMGATSLLFWLTSIGAGRMIGYW"
     gene            complement(512..895)
                     /locus_tag="VLJ17_05295"
     CDS             complement(512..895)
                     /locus_tag="VLJ17_05295"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HSV22428.1"
                     /translation="MRLNTIVLTAAISTASTIPAFAHHGWGGNVDEVTAMTGTVTEGV
                     KLAGPHGTMKIMTSDGKVWDITLAPPFRTASAGLKQDTIPVGAMVTVHGQRNRDPNRH
                     EMKTIQVEYAGRHYNVYPEFAHKVR"
     gene            complement(886..1095)
                     /locus_tag="VLJ17_05300"
     CDS             complement(886..1095)
                     /locus_tag="VLJ17_05300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22429.1"
                     /translation="MLSDAERATLGEMGHCLGRKVLAEVATVGRPDTILPWYRKLADA
                     QNFSLPVTHGLRHNAPVQLRSMLCA"
     gene            complement(1099..1305)
                     /locus_tag="VLJ17_05305"
     CDS             complement(1099..1305)
                     /locus_tag="VLJ17_05305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22430.1"
                     /translation="MFTASIAVQEAFRYIFWAITTTGDQRKEAVMDRARILAYVTGTV
                     DQELLTRNEYLATENRILKHQLKG"
     gene            1360..2010
                     /locus_tag="VLJ17_05310"
     CDS             1360..2010
                     /locus_tag="VLJ17_05310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22431.1"
                     /translation="MKKRSFIASFLAGVALLAASLPAVSADTPSIVSVSAPPDSSDLY
                     AWAFDTGIYSIAFPIKDPEHIGIGYIVEPEPFHRTWSPMTDFVMHDHMYVAPGLPDPR
                     RANITYRFDAPAKISEVLIVQHTNGIAQVEGFIGYDEKNLKSIGFANSTLGANLPLRE
                     NTFAEGYRDVFKFERAGEGKVFRVVITKTPLPNGYAVYRVYPRNSDHRPYDVLRSD"
     gene            complement(2498..2863)
                     /locus_tag="VLJ17_05315"
     CDS             complement(2498..2863)
                     /locus_tag="VLJ17_05315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014439789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22432.1"
                     /translation="MSTNNSYLAVFLGSKTSPQRKTWDALPEEERRAKEREGIAAWKA
                     WVERNQAAIVGMGGPLGKTKNVAPNGIEDVSNDMGAFVVVRADSHEAAAKLFESHPHF
                     AIFPGESIEVMPVLPIPGQ"
     gene            complement(3676..4749)
                     /locus_tag="VLJ17_05320"
     CDS             complement(3676..4749)
                     /locus_tag="VLJ17_05320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-independent methionine synthase II
                     family protein"
                     /protein_id="HSV22433.1"
                     /translation="MVRRQRELGIDIPDDGEFGKPVAGSYDYGAWWNYAFVRLSGFSP
                     AGAGAQSRHQKSRVADLALTSFTNRRDWQKFAEFYQDPESSGSLMGSAARRPVARPAC
                     TGPVKYVGHAALAADIANLKTALAATGTQEGFMCSIGPGSFARGDDFYYGTEEEFLFA
                     AADALHEEYEAIVDAGIVLQIDDPSLPDNWDMINPEPPLDEFKKFEKVRIEALNHALR
                     GLPADRIRFHICWGSWHGPHTTDIPLRDIVELVLSVNAGAYSVEAGNVRHEHEWRVWE
                     EVKLPDGKILIPGVVSHATNIVEHPQVVADRIMRYAKIVGRENVIAGTDCGLGGRIHP
                     QIAWAKLQVLSEGAAFASKELWS"
     gene            5153..6202
                     /locus_tag="VLJ17_05325"
     CDS             5153..6202
                     /locus_tag="VLJ17_05325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetamidase/formamidase family protein"
                     /protein_id="HSV22434.1"
                     /translation="MRFFRPFQHLAVAVMTLLGSAVVPHIGQTAEFTLMPSPQTVHIG
                     HFASNLKPVLSIASGDTVTIETSSLFAPEIIDQSGVVPPSAIPQYQRDIFREVKDRGP
                     SGHVLTGPIEITGAMPGDVLEVRILEVELALDWGVNRQRPYAGVLPDEFTALWMRVIP
                     INRQTKTAEVGRGVVVPVDKPFFGTMGVAPDATLGRISSGPPGIHTGNLDNKDLIAGT
                     TLYMPVHVAGALFSVGDAHAAQGHGEVDITAIETGLRGKFQFIVRKDMRLLWPRAETP
                     THWVVMGLNPDLDDALKIAVRETIDLITKRFPHLTREEAYMIASVAVDYHVTQAVDGT
                     KGIHGMIPKAIFRAQ"
BASE COUNT         1333 a         2040 c         2055 g         1411 t
ORIGIN      
        1 aggccgagga cgcctcgcag cactcaccag tatccgatca tccggccggc accgatcgag
       61 gtcagccaaa acagcaatga tgtggccccc atggcggcga ggcgcctgcg ctccgtatgc
      121 gtcaggtcgc ggttctggtg cgcgcgccag gcggatgagc gatgaacgaa gaacacgttg
      181 agcagggcca acccgatggc cggaatcttg gcgtagagaa acggattgcc gacatattcc
      241 gttgccttgg tcgcgagcag acccgcgcca ctgacggcgg cgatgccgaa tcccggcgcc
      301 gccatacgcg tggtggggcg cgaaatcgcc gccagcggcg catccggcca gaaccccaac
      361 aggcgcaggt cgagaataac caccgacccg aacagtgtcg ccaccccaat gatatgcgtg
      421 agattgatga tcccgtagaa ccagacgccg ttgtcccgca tgacgtggcc gagggtggag
      481 ccctcaagcc acgccatgag ctgcacgaag ctcaccgcac cttatgtgcg aattccggat
      541 acacattgta gtgcctaccg gcatattcga cttgaatggt cttcatttca tggcggtttg
      601 gatcgcgatt gcgctgacca tgcactgtca ccatcgcacc gacgggaatg gtgtcctgct
      661 tcaggccggc cgaagcggtg cggaacgggg gcgccaacgt gatgtcccaa accttgccgt
      721 cagaggtcat gatcttcatg gtgccgtgcg ggccggcgag cttgacgccc tcggtgaccg
      781 tgccggtcat ggcggtaact tcatcgacgt ttccgcccca gccgtgatgt gcaaaggcgg
      841 gaatggtgga tgcagtggaa atggcggcgg tgagcacgat tgtgttcagg cgcataacat
      901 actcctaagc tggaccggcg cattatgccg caatccgtgg gttacgggga ggctgaaatt
      961 ttgcgcgtcg gccagcttgc ggtaccaggg caggatcgtg tccggccggc cgacggttgc
     1021 gacctcggcg agaaccttgc gacccaggca atgacccatc tcgccgagcg tggctcgctc
     1081 ggcgtccgag agcatcagtc agcctttcag ttggtgtttc aggatgcggt tttcagtggc
     1141 cagatattcg ttccgggtca gcagctcttg gtccaccgtc cctgtgacgt aggccaggat
     1201 gcgcgcccga tccataacgg cctctttgcg ctgatcccct gtggtggtga tcgcccaaaa
     1261 aatgtaccgg aacgcctcct gcaccgctat gctggccgtg aacaactgac cgtcctatca
     1321 gccgttttag ttttttgacc cttacggggg agaagcatca tgaagaaacg ttcgtttatc
     1381 gcatcttttt tggcgggcgt ggctcttctg gcggcttctc ttcccgccgt ctcggcggac
     1441 acaccatcta tcgtcagcgt atcggctccg ccagacagtt cggacctgta tgcctgggct
     1501 ttcgacacag gaatctatag catcgccttt cccataaagg accccgaaca catcggcatc
     1561 ggctatatcg tcgagccgga accgttccat cgcacttggt cgccgatgac ggactttgtg
     1621 atgcatgacc acatgtacgt ggcgcccggc ttgccggacc cgcgcagggc gaacatcaca
     1681 tatcgtttcg atgcgcctgc gaagatatcg gaagtgttga tcgttcagca cactaacggc
     1741 attgcacagg tcgaggggtt catcggctat gacgaaaaaa acttgaaatc catcgggttc
     1801 gcgaacagca cgctcggcgc caatcttcca ctcagggaaa acacgtttgc ggaaggctat
     1861 cgcgacgtct tcaagttcga gcgggccgga gaaggcaagg tgttccgggt cgtcatcacc
     1921 aaaacacccc tgccgaatgg ctatgcggtc tatcgcgtct atccgaggaa cagcgatcac
     1981 cggccgtatg atgttctccg cagcgactga ggcgagcctg caaaaccgtt ggcaatcccg
     2041 gcggcgggcc gcccttcacg cgtaaccagg atgagcgccg tccgcggcgc ttcctgaatt
     2101 cggcgcactt tgccttacga ctgaatttgc cgtcacggcc gccgtccttg ccaggggcaa
     2161 ataaggttgg cggcctcact tctatcgttt gatcgggtga gggcttcgcc cttgcgtgcg
     2221 gtgtccgctg cgtacaacgg gcggccccca tcgggcagcc gattaggggc aggacacgcg
     2281 tcaccgaaag ttcctcgcct tcttcaactt gtcgatttgc cggtcaggct cgtacatgtc
     2341 gcgcggtttc gtgatcgggc atggatcgca gctgtcggcc cacttcctcc gttcggggcg
     2401 cgcaatcacg ccctcattgt tgccttcgcg cgctcgaaag agcctctttc aaggtcggtg
     2461 agagagaggc ccgccacgca tctcaatggc aatcaaacta ctgtcccggt atcggaagta
     2521 cgggcatcac ttctatggat tctccgggga agatcgcgaa gtgcggatgg ctttcgaaga
     2581 gcttcgcggc ggcttcatgc gagtccgcac gtacgaccac gaatgctccc atgtcattgc
     2641 ttacatcttc gatgccgttt ggggccacgt tcttggtctt gccgagcggc ccacccatgc
     2701 cgacaattgc tgcctggttt ctttcgaccc acgctttcca tgccgcaatt ccctcgcgtt
     2761 cctttgctcg cctctcctct tcggggaggg cgtcccacgt cttcctctgt gggctggttt
     2821 tgctgcccag gaaaacagcg agatagctgt tatttgtgct catgacgctt cctttcttac
     2881 gccttatggg tcttacacta gtggctggcg ctgacgaagc ctttgcgtgc tacggcagtt
     2941 tcggcgatcg atgctcccac tcgtttattt cgactcaagg acggcccaag cgggctcggt
     3001 ccgacacgct tccgaatttt tttcgcggct gtcgagagca tgctcactgg catgagtgct
     3061 gcaatatctt caaggcgaga tggctttcaa gtccccgatg gaatggtccg gccgtgctcc
     3121 cgtcccccgt cccaccggcg ggtgatgttg ggatggacga gtgtcaggtg tttgctgggc
     3181 aggcttcggc attcggctgc gcaagcaata cgacgactac ggccgggtca ttcgcgattc
     3241 gaacatcaag gcggattgcg atttgagaag ctgcaatcca gtcactgcga aaatggcagc
     3301 ttcgggtcgt gtgtccgcca atccacacgc gagcgcaact atacgggaga tgaaggaggg
     3361 cccttcttgc acggttctgg gagcgcccgg gggtgaaact cccccgggcg actcgacaat
     3421 ttcacccgtg gtgacagcac ggagagcagc tcatccaccg ataacagacc cgggccagga
     3481 gcggccatat cacactatac gacgcggctt ttgtccggaa gtgatgcgtc gctgggccgc
     3541 aatcaattac aggcaagctt ttctcctacg tcgtgacgta ggctggcaaa gcgaagcgcg
     3601 gccaccaaac gcagcgagtg ggcagggcgc gtaagagggc gcctttgcta caggtgcttc
     3661 cagtcgatcg atccgctagc tccacagttc cttgctggcg aatgcggcgc cttcggacag
     3721 cacctgaagc ttcgcccagg cgatttgcgg atgaatacgg ccgccaaggc cacaatccgt
     3781 gccggcgatg acgttttcgc ggccgacaat cttggcgtag cgcatgatgc ggtcggcgac
     3841 gacctgcgga tgctccacga tgttggtggc atggctgacg acgcccggaa tcaggatctt
     3901 gccatccggt agcttgactt cctcccacac ccgccattcg tgttcgtggc gaacattgcc
     3961 tgcttccacc gaatacgcgc cggcgttgac gctcaacacg agctcgacga tgtcccgcag
     4021 gggaatgtcc gtggtatgcg ggccgtgcca gctgccccag cagatatgaa agcggatgcg
     4081 atcggcgggc aggccgcgca gcgcgtggtt caacgcctcg atgcgcacct tctcgaattt
     4141 cttaaattcg tcaagcggcg gctcggggtt gatcatatcc cagttgtccg gcaggctcgg
     4201 gtcatcgatc tgcaacacga tcccggcatc gacgatcgct tcgtattcct cgtgcagcgc
     4261 atcggcggcg gcgaacaaaa attcctcttc tgtcccgtag tagaagtcat cgccgcgcgc
     4321 gaagctgccc ggccctatcg agcacatgaa gccttcttgc gtaccggtag cggcgagcgc
     4381 cgttttcagg ttggcgatgt cggcggcaag tgcggcgtgc ccgacgtatt tgaccggacc
     4441 ggtgcaggcg gggcgggcaa cgggccgccg cgccgcgctc cccatgaggc tgccactcga
     4501 ctccgggtcc tgatagaact ccgcaaattt ctgccagtcg cggcgattgg tgaaagaggt
     4561 cagcgcgaga tcggcgacgc gcgacttctg gtgtctcgac tgtgcgcccg caccggccgg
     4621 agaaaatccg gacaatcgca caaaggcgta gttccaccac gcgccgtagt catagctccc
     4681 ggccaccggt ttgccgaatt cgccgtcatc gggaatatcg atgccaagtt cgcgctgcct
     4741 gcgcaccacg tcggaaacgg cggcggcgag gacttgggcc aaaacggcgt catccttgct
     4801 ttctcccgcg gcgcgtgccc ggccgatggc gatgagactt gccggccgcg acaggcttcc
     4861 ggcatgggtg gtgagaatgc gatctgtgct gcgtctcatg gttcctcgtg cccgtttggc
     4921 aaagatgcta gagcgcgttt cggtcatatg gaagcgtcgt aggtgggcaa gccccctctc
     4981 gcctaaccgt ggcaccttac ggtagcttga tagaggtgct acgctggacc gtgccgagca
     5041 ttgcgacgcg caagccaacg tgccgtcggc cagcaaaacc aaatctttca tcgccgcctc
     5101 agcgcgcact caaagtgcga ggcgggcctc agcgtagcgt ctggaggatg tcatgagatt
     5161 ttttcggcca tttcaacatc tcgcagtggc tgtcatgacg cttttgggaa gcgcggtagt
     5221 gccgcacatc ggccaaacag cagagttcac gcttatgcca agcccgcaga ccgtgcacat
     5281 cgggcacttt gcgtccaacc tgaaaccagt gctgagcata gcctccggtg acacggtcac
     5341 tatcgagaca tcatcgttat ttgccccgga gatcattgac caatccggcg tggtgccgcc
     5401 aagcgcaatc ccgcaatacc agcgcgacat atttcgagag gtgaaggatc gcgggccctc
     5461 tggacacgtg ctcactggac caatcgagat cacgggcgcg atgcccggtg acgtgctcga
     5521 agtgcgcatc cttgaggtcg aactcgcgct tgactggggg gttaaccggc agcggcccta
     5581 tgctggagtg ctgcccgacg aattcaccgc cctgtggatg cgggtcatcc cgatcaatcg
     5641 gcagactaag accgccgagg taggccgcgg tgttgtcgtg ccggtcgaca agccattctt
     5701 tggtactatg ggtgttgcgc ctgatgccac gctgggccgc atcagcagcg gtccgcccgg
     5761 cattcatact ggcaacctcg acaacaagga cctgatcgcc ggcactacgc tgtacatgcc
     5821 ggtccatgtc gcgggcgcct tgttctcggt cggcgatgcc cacgcggccc aggggcacgg
     5881 cgaggtcgac ataactgcga tcgaaacggg gttgcgggga aaatttcaat tcatcgtgcg
     5941 caaggatatg agacttctgt ggccgcgtgc cgaaacgccc acgcattggg tggtgatggg
     6001 cctcaacccg gacctggacg atgcgctgaa gatcgccgtg cgcgaaacta tcgatctcat
     6061 tacgaagaga tttcctcatc tcacacgcga ggaggcctac atgattgcga gcgtggccgt
     6121 cgactatcat gtcacacaag ccgtggacgg caccaaaggc attcatggaa tgattccgaa
     6181 agcgatcttt cgagcgcaat aaggtgcagt atgaagggcg catctcgatg ccaaaggccc
     6241 gcgcaatctc ctgtgcgatg cggggacagc caatacgggg attgcggcgc ttgaactcga
     6301 cgatcgtgtc gatgagttcc ttcgatagcc cttttgggcc ggggcgccga cgaccacccg
     6361 atgagaaaag ccaccgatgt ttgcgtttct tgagtgcctc gtggaatctt aacaaggttc
     6421 tgggcttcag gacgacggcg agctttgaaa accgactcgc cggaacgaac agtgatacaa
     6481 gaccgaagac gaagcgatcg aacgcattca aattcggggc tcgctgccgc gcgcggctgc
     6541 tgatgaccaa ctggtgcttt agcaacaagg attcggccac gacggcgcgt actccgcccg
     6601 ggcgcaggag cttggcaatg gtggtaaaca agtggacggc gagcatgagc aggtgaatca
     6661 tcgacatgaa cgataacacg aagtcgacat ctcacaagac tgcctacgcc gctccatttt
     6721 gggaggattt acgaattcgc catggacagg gcggcatcta cgatagcgcc gtgcattttt
     6781 cccccgagca ggcattgagt taagttcttg tcggcttggt ccatttggcg atccatgac
//
LOCUS       DATILV010000231         3529 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1591281, whole genome shotgun sequence.
ACCESSION   DATILV010000231 DATILV010000000
VERSION     DATILV010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3529)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3529)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3529
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1591281"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            111..1073
                     /locus_tag="VLJ17_05330"
     CDS             111..1073
                     /locus_tag="VLJ17_05330"
                     /inference="COORDINATES: protein motif:HMM:NF014798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HSV22435.1"
                     /translation="MITYLEAIRSALAKALADDPRVFLYGQDIGSFGGAFKATKNLAK
                     EFPGRVIDAPLSEDAIVGVAIGAAIEGMRPIIEMQFADFSVCGMNQIVNHAATLFYRT
                     EVPCPIVVRLPSGGTPGSGPFHSQSMEALYAHYPGLIVMTPGTVEDAFSMLLEAVAID
                     DPVLFCEHKFLYNHLKADRLPDSNIPSFKARLSRQGRDATIVTYGAMLHESLAAADEL
                     AEDGYEIEIVDLRTVKPLDTDTVLASVARTGRMLCVAEAWPWGGVAAEVVARVSAEGF
                     GLLDAPPQRLSARDTPVPYHPDLWSAHRPTASAIASAMRRLLEM"
     gene            1078..2271
                     /locus_tag="VLJ17_05335"
     CDS             1078..2271
                     /locus_tag="VLJ17_05335"
                     /inference="COORDINATES: protein motif:HMM:NF012424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HSV22436.1"
                     /translation="MALVPILMPQLGESIAEATIIKVLLKEGDAVEADHNVIEVETNK
                     AVMDVTSPCSGHVSEILVEEGKSYPVGAVLGYVEVDAQEASRLGLEETPTKAPQKKAA
                     QRQPGPVGPSQVEPTVKGLPVPAYATGATFLSPRMKARMAELGLHAADMAGIAGSGAG
                     GRVTIEDLEKFLEALERNRISPASPMRVAVADAMRRSATRPLATVVLPVCLDAMLSHR
                     KASGPHKAGPALYALRALAIALSENSAPAGRLIGDRIIHPRSIDIGFAVEAEDGVLVP
                     VIRNADQFRLVDLVERYDRLVDLARQRRLAAGETGGSIATVTNYGVFGLTIATPIPLP
                     EQTLLLGMGCGQVVPHWEPQNNAFVPITEAAFTLSFDHRVLDGGAAGRLLKRVAELLN
                     APAEL"
     gene            complement(2409..3529)
                     /locus_tag="VLJ17_05340"
                     /pseudo
     CDS             complement(2409..3529)
                     /locus_tag="VLJ17_05340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387112.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="regulator"
BASE COUNT          766 a         1042 c         1039 g          682 t
ORIGIN      
        1 aagaacgaag tcgatgtcac cgccgcgaaa gtgcagcgag agccatcgcc cgatccgaat
       61 gaggatgatt ggaaggcaat ctcaagcccc tgcgagacgc tggcagaggc atgatcacct
      121 atttggaagc gattcgttcc gcgctggcca aagcactcgc cgacgatccg cgcgtttttt
      181 tgtatggtca ggacattggc tcgttcggcg gcgctttcaa ggccaccaag aatctcgcca
      241 aagaatttcc gggacgggtc attgacgctc cgctgagcga ggatgccatc gtcggcgtcg
      301 cgataggcgc cgcgatcgag gggatgcgtc ccattatcga gatgcaattt gccgatttct
      361 cggtgtgcgg catgaaccaa atagtcaacc atgctgcgac cttgttctat cgaacagagg
      421 tgccgtgtcc gatcgtggtg cggctgccat caggtgggac gccgggcagc ggaccctttc
      481 acagccagag catggaggcg ttgtatgccc attatcccgg tcttatcgtg atgactcccg
      541 ggaccgtgga ggatgcattt tcgatgttgc tcgaagcggt ggccatcgat gatcctgtcc
      601 tcttctgtga gcacaaattc ctttacaacc atttgaaggc cgatcggctg cccgattcca
      661 acataccttc gttcaaggcg cgcctttcca gacaagggcg cgatgcgaca atagttacgt
      721 atggggccat gctgcatgaa tcgctggccg cagcggacga attggccgag gacggctacg
      781 aaatagagat cgtcgatctc cgaacggtaa agccgctcga taccgatacg gtgctggcct
      841 cggtggcccg aaccgggcgc atgttgtgtg tggcggaagc ttggccctgg ggtggcgtgg
      901 cggcggaggt tgtcgctcgc gtctccgccg aaggttttgg cctgctcgac gctcctcccc
      961 agcggctcag tgcgagggat actccagtgc cctatcaccc tgatttgtgg tcggcgcatc
     1021 gtccaaccgc aagcgccata gcttctgcga tgcggcgtct gctggaaatg taaacctatg
     1081 gctctcgtcc ccattctcat gccacagctc ggcgaatcga tcgccgaagc aacgatcatc
     1141 aaggttctcc tcaaggaggg tgatgccgtc gaagccgacc acaatgtaat tgaagtcgag
     1201 accaacaagg ctgtcatgga cgtaacctcc ccctgcagcg gccatgtttc cgaaatcctc
     1261 gtggaggagg gaaagagcta tccggtcgga gcggtcctcg gatacgtcga agtcgatgcc
     1321 caggaagcat ccagattggg actcgaggaa acgccaacga aagctcccca gaaaaaggca
     1381 gcccaacgcc agcccggacc tgtcggccca agtcaagtcg aaccgaccgt gaaaggattg
     1441 ccggtgccgg cgtatgcgac aggcgccacg tttttgtcgc cgcgaatgaa ggcgcgcatg
     1501 gccgaactgg gccttcacgc cgccgacatg gccggaatcg ccggaagcgg cgcgggcggg
     1561 cgcgtgacca tagaggacct ggagaagttt ctcgaggctc tcgagcgcaa ccgcattagt
     1621 cctgcctctc cgatgcgcgt ggcggtcgcc gacgccatgc gccgcagcgc cacgcggcct
     1681 ttggccactg tcgtcttgcc agtctgcttg gatgcaatgc tctcgcaccg caaagcgagc
     1741 gggccgcaca aggcggggcc agctttgtat gccttgcggg ctctggcgat tgcgctttca
     1801 gagaacagcg cgcccgccgg caggctcatc ggcgatcgga tcattcatcc acgctccatc
     1861 gacatcggat ttgcggtgga ggctgaggat ggtgtgcttg tcccggtcat ccgcaatgcc
     1921 gatcaattcc ggcttgtcga tctggtggaa cgttatgacc gcctcgtcga tcttgcccgg
     1981 caacgccgcc ttgccgcggg tgagacgggc ggctcgatcg cgacggtaac aaattatggc
     2041 gtgttcggtc tgacgattgc gacgccgatt cccctaccgg agcaaacctt gctcctcggc
     2101 atgggttgcg ggcaggtggt gccacattgg gaaccgcaaa acaatgcctt cgtcccaata
     2161 accgaagcag ccttcacgct gagcttcgat catcgcgtcc tcgatggcgg agctgccgga
     2221 cgtctcttga agcgcgttgc ggaactccta aacgcaccgg ctgaattgtg aaccgtctgt
     2281 cgtccggctg agggcggagg ctttcgcgtg cgacgctatt cggccagctg tggaagtgcc
     2341 ggcccggagg cgatggtctc ctttgatctg tcgacaacga ccaatttggc gcaaccggcg
     2401 aagattaccg cgacgatgag atagctgaat gccacggtcg gatcgtgggc gatgccgatc
     2461 tgatgcccgt gcatgaagcc aaagaacgtc aagatggctc ccgcgagtgc aaatccggcg
     2521 cctttcatga agttgcgatc gattatgcat acagccatcg ccccgaggat caatccgccg
     2581 agaatcgaac cacctccgag aacctcgaga cccctgtaga gcactccttg atctttcatt
     2641 ttccccgtag tcttctgtga ccgtgaaggt ccccaccgat gccaaggcgc cattcatcag
     2701 cgtaacggcc caatgtgcga gatgcggtgt cagagcaaga atgatcgcag gagcatggct
     2761 cttcggcgtc tcttgaaacg cctgcgaacc aattagcatg ccgatgtaga gcagaatcgg
     2821 cagaatggcg atggtcggaa tcagcgcgag catgagcgaa atcgtgccga gccagcacaa
     2881 gagaattacc gcaacgccgg tggcggcgga gtagccgatc cgtccaccca tcgccttcca
     2941 tcccggatgc ccgatgtaaa cggcattgat aaacgggtta cccatcaggc agccaataaa
     3001 gctgaccact ccatctgccg ttaacacccg cgtggttgga aattcatcgc cggccaccgc
     3061 agcgctttcc acgttgtcga gtgcttccac aagatcgtaa attccaaacg gaattgccgt
     3121 gacgaggatc accccaagga attcaaaacc ggagaaaaca tggccgaacg cgggcagggg
     3181 cactcgaaag ccaaaattgg ccaccgcatc agtgagacct ttcagactca tgccgccata
     3241 gttgaggccc acagcggtcg aactccaggc aatcaaggtt ccgaccccga tggccaccaa
     3301 gcccgcggga attccacgat acttaacgcc accgaaccag ctcagcagaa tgatggcaaa
     3361 gcagataaac ccgatcattg gcgtcatgaa catttgaact gccggcgcca tcgagatgaa
     3421 cgtgatggaa actccggcca gagtgcccag aagcgccgcg cggggagtga ttcgccgaat
     3481 gatcgggccg atgaagcctc caatcatcag gacgaagctc tgcataaac
//
LOCUS       DATILV010000232         5342 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4400796, whole genome shotgun sequence.
ACCESSION   DATILV010000232 DATILV010000000
VERSION     DATILV010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5342)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5342)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5342
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4400796"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1555
                     /locus_tag="VLJ17_05345"
     CDS             <1..1555
                     /locus_tag="VLJ17_05345"
                     /inference="COORDINATES: protein motif:HMM:NF017085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CHAD domain-containing protein"
                     /protein_id="HSV22437.1"
                     /translation="ETLNSVYFDSNRRLLHKNGLTLRVRHIGDKRVQTIKTTNPTSSG
                     LLERSEWEQTIESDKPDLTHAKDTALGPLLADDVRYGLQPVFETRIERTSYQLSESGT
                     ELIMATDEGQIIAGDSSCPVSEIELELKHGSRDQLFKIAREIIKIVPAHLDVKSKPER
                     GYELLAKAPVAAETARDPELTAGMNAGRAFILIGRACLRQLIANLPATIDRDAEALHQ
                     LRVALRRLRAAISLFSRVVSDDRVNTIKTELRWLARECGPARDLDVLLIEVLKPLQRQ
                     NANEPGLVSINKMFMRRRLKTYQQALGAVQSDRFRTLLLDAAEWIEVGPWRTSEDAPV
                     CACRKMPIEIYAADQLSQYRKKIRRRGAKIDDLTAEQMHRLRIQVKKARYAIEFFAGL
                     YQDKKAAKRCKEIRSSLMQLQDCLGGINDIVTRKALFGDIIARPARGLSEEQNRRRAF
                     AVGLVMGDQQARITKLLGGARKAHSRFDSTKPFWKSLQRRAQAQSRFTDSERTLERAD
                     DVQLSAIES"
     gene            complement(1657..2175)
                     /locus_tag="VLJ17_05350"
     CDS             complement(1657..2175)
                     /locus_tag="VLJ17_05350"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012251875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSV22438.1"
                     /translation="MVEAGKYSAVELLQDGRRIEIRSLKPEDREEFVAAVNRTSGQSL
                     HRRFFAAKRSFTEQEVAFFLNVDFVNHVALIAVLQEGQRPVVGGGRYVVVQPSKAEVA
                     FVVVDGYQRQGIGAALMCHIIAIAREAGIKELAAEVLPENTAMLKIFKKTGLHLTAKR
                     ESQVVHVTLQLV"
     gene            complement(2230..2802)
                     /locus_tag="VLJ17_05355"
     CDS             complement(2230..2802)
                     /locus_tag="VLJ17_05355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007608059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HdeD family acid-resistance protein"
                     /protein_id="HSV22439.1"
                     /translation="MTTASDAHTPQTASELEPLRAKSGWIIALGVIYVIVGFVALGSV
                     VMATAASVLVVGIMMVIAGVAEVINAFQIKTWGKFILWLILGALYILAGVVTFENPLL
                     AALILTLMLGAALVVSGIMRIVLAFGMKEGTPWIWVVLSGAVTLLLGLMILTRWPVSS
                     LYVLGLFLGIDLVIAGGSWIGIGVGLKKRA"
     gene            complement(2826..3644)
                     /gene="ppk2"
                     /locus_tag="VLJ17_05360"
     CDS             complement(2826..3644)
                     /gene="ppk2"
                     /locus_tag="VLJ17_05360"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017487047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006793 - phosphorus metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2"
                     /protein_id="HSV22440.1"
                     /translation="MAKAQKNAPEGTNQKLKRKDYEKELRKLQVELCRLQEWVKYKGL
                     RVIILFEGRDAAGKGGTIKAITERVSPRVFRVVALPAPSDREKTQLFMQRYIQQFPAA
                     GEVVILDRSWYNRAGVEFVMGFCTEAEHHRFLELCPLAEKWVTETGIILIKIWLEVGK
                     DEQERRFLARINDPLRQWKLSPMDLESYGRWYDYSKARDLMMKATDTEQAPWHIVRSD
                     NKRRARLNCIAHILTLIPYKRTPQTKIKLPKRSDEGRYDDMAGLKGRNFVPELY"
     gene            complement(3713..4165)
                     /locus_tag="VLJ17_05365"
     CDS             complement(3713..4165)
                     /locus_tag="VLJ17_05365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22441.1"
                     /translation="MVAALDDLIPSAVDCRKKIALAEAEKASALARGQAAEEAEKKEL
                     LERLEKPSGVSDEERLKRAASIIQRAVDNGLTEVFVGRFPNTLFTDRGRAINQQEPGW
                     ENTLTGLPRELYQFWEKYLRPRGFRLRCQIVDWPGGMPGDIGMTVAWG"
     gene            complement(4530..4958)
                     /locus_tag="VLJ17_05370"
     CDS             complement(4530..4958)
                     /locus_tag="VLJ17_05370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005267 - potassium channel activity
                     [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium channel family protein"
                     /protein_id="HSV22442.1"
                     /translation="MLQQMAVGAAVGACNIVIHALVMAVVLWVTRVVSAKARWHPWLF
                     LIVVMFATVSVLMIAHACEVIVWSVAYAMVGAAPAGTDLVYFAFVNYTTLGYGDVVPV
                     EAWRLLGPMTAMNGVLLFGWSTAVIFEVLRRAMIKNDILS"
     gene            complement(5058..>5342)
                     /locus_tag="VLJ17_05375"
     CDS             complement(5058..>5342)
                     /locus_tag="VLJ17_05375"
                     /inference="COORDINATES: protein motif:HMM:NF012696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004089 - carbonate dehydratase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HSV22443.1"
                     /translation="HAHAAAFRLEHEGELDAKLKSYDQLSQLNVLVQLEHLMTYAIVR
                     DRVLAKRLRLSGWWFDVASGSMYAYDRAVRSFEVIDREMAERLVTRLTTS"
BASE COUNT         1232 a         1540 c         1444 g         1126 t
ORIGIN      
        1 cgaaacgctg aattcggtct atttcgattc caatcggcgg ctcctacaca agaacggatt
       61 gactttgcgc gtgcgccata tcggcgacaa gcgggtccag acaatcaaaa caaccaatcc
      121 taccagctct ggcttgcttg aacgatcgga gtgggagcag accatcgaaa gcgacaagcc
      181 ggacctcacg cacgcgaaag atactgccct cggcccgctt ctcgccgatg acgtccgata
      241 tgggttgcaa ccggtcttcg agacccggat cgagcgaacg tcctatcaac tgagcgaaag
      301 tggtaccgaa ttaatcatgg cgaccgacga agggcagatt atcgcgggcg attcatcgtg
      361 tccggtttct gaaatcgaac tcgagctcaa gcacggcagc cgcgaccagc tttttaagat
      421 cgcgcgcgaa attataaaaa ttgtacccgc tcaccttgat gtaaaaagca agccggagcg
      481 cggatacgaa ctgcttgcca aggcaccggt cgccgccgag acagcgcgcg atccggagtt
      541 gacggcgggg atgaatgcag gtcgggcatt catattgatt gggcgagctt gtttgcgcca
      601 attgattgcg aatctgcccg caacgataga ccgggatgcg gaggcactgc atcaattgcg
      661 cgttgcatta cgtcgactgc gcgcggcaat ttcgctattt tctagggttg tgagcgacga
      721 tcgagtcaac accattaaga cagagctgag gtggttggcg cgggaatgcg gcccggcacg
      781 cgatttggat gttctcctca ttgaggtcct caagccactg caaaggcaga acgcaaatga
      841 gccaggcctt gtcagtatca acaagatgtt catgcgaaga cgtttaaaga cctatcagca
      901 ggcgctgggc gctgttcaat ctgatcgatt tcgcacgctc cttcttgatg cagcggaatg
      961 gatcgaggtc gggccctggc ggacgtcgga agatgcgccg gtatgcgcat gccggaaaat
     1021 gccgatcgag atctatgcgg ctgatcagct gtcgcagtat cgcaaaaaaa tcaggcgacg
     1081 aggcgcaaag atcgacgacc taaccgcgga gcaaatgcac cgattacgca ttcaagtcaa
     1141 aaaagctcga tatgcgatcg aattctttgc tggtttgtac caggacaaga aggctgcaaa
     1201 gcggtgcaaa gaaattcgat catcgctgat gcaattgcag gattgcctgg gcgggatcaa
     1261 tgacatcgtg acacgcaagg cattgttcgg ggatatcatc gcgcgtcctg cgcgaggtct
     1321 atcagaggaa caaaaccgcc gccgcgcatt cgccgtgggt ctcgtcatgg gggaccagca
     1381 ggcgcggatt acgaagttgc ttggtggcgc gcgcaaagcg cattcacgtt tcgatagcac
     1441 caagccattt tggaagtcgc tccagcggcg tgcacaggcc caatcacgct tcaccgactc
     1501 tgagcgcacc ttggagcgcg ccgacgacgt tcagctttct gcaattgaga gctgaggaga
     1561 tacgcgcaag cggctagact ggaaaggaaa acgaacgtaa accgagccca ggggaaaggc
     1621 gccaccgttt caggaatccg ttatgagaga tatcggtcac accagctgaa gcgtcacgtg
     1681 cacaacctgg gactcccgct tggcggtaag gtgaagtcca gttttcttga atatcttcag
     1741 catcgcggtg ttctcgggca gaacttccgc ggcgagttcc ttgatcccgg cttcacgtgc
     1801 aatcgcgatg atgtggcaca tgagtgccgc tccgatacct tgcctctggt atccgtcgac
     1861 caccacaaaa gctacctcgg ccttgctggg ctgcacgacg acgtagcgtc cgccgccaac
     1921 aaccggccgc tgtccttcct gcaacacggc gatcaaagcc acgtggttga cgaaatcaac
     1981 gttcaggaag aacgcgactt cttgctccgt aaagctgcgt tttgcggcga agaagcggcg
     2041 gtggagagat tggccactgg tgcggttgac ggccgcaacg aactcttcac ggtcctccgg
     2101 cttgagagag cgaatttcaa ttcggcgtcc atcctgcagc aactcaacag ccgaatactt
     2161 gcctgcttcc accatggctg gcaactttat cgcctgcggc gctgtccacc gtcaatgttg
     2221 ccgtgcagtt tacgcgcgct ttttgagacc tacgccaatg ccgatccagc tcccccccgc
     2281 aatcacaaga tcgatcccga ggaaaagtcc gaggacatag aggctcgaga ccggccagcg
     2341 cgtcaaaatc atgaggccaa ggagcagggt gacggccccg gagaggacca cccagatcca
     2401 gggagttccc tccttcatgc cgaacgcgag gacgatccgc ataattccgg aaacgacgag
     2461 cgccgccccc aacatcaggg tcaggatcag tgccgcaagc agcgggttct cgaaggtcac
     2521 aacgccggcg aggatataca gagccccgag aataagccaa agaatgaatt tgccccaggt
     2581 ttttatctgg aacgcgttga tgacttccgc cacgccagca atcaccatca taatgccgac
     2641 caccagcaca ctcgcggctg tcgccatgac gacgctaccg agggcaacga agcccacgat
     2701 gacataaatg acgccaagcg cgatgatcca accacttttt gcacgcaatg gctccagttc
     2761 ggaggccgtc tgcggtgtat gggcatcaga tgctgtagtc atggttggcg tcctccattt
     2821 gcgggtcagt acagttcagg tacgaaattc cgacctttca atcccgccat atcgtcatat
     2881 cgtccttcat cggaccgctt aggtaatttg atcttggttt gcggcgtcct cttgtacggt
     2941 atcaatgtca gaatgtgggc gatgcaattg agccgcgccc ggcgcttgtt gtctgagcgc
     3001 acgatgtgcc aaggcgcttg ctcggtgtcg gttgccttca tcatcaagtc gcgcgctttc
     3061 gaatagtcgt accaacgccc gtaggattca aggtccatcg ggctaagctt ccactgccga
     3121 agcgggtcgt taatgcgagc caagaagcgc cgttcttgct cgtcctttcc gacctccagc
     3181 cagatcttga tcaaaatgat gccggtttcg gttacccatt tttcggccag cgggcaaagt
     3241 tcgaggaatc ggtggtgctc cgcctcggtg cagaacccca tgacgaattc gactccggct
     3301 cgattgtacc aactgcggtc gagaattacg acttcgccgg cggcagggaa ctgttggata
     3361 tatcgttgca tgaacaattg ggtcttttcg cgatcggatg gcgccggcag cgcaacaaca
     3421 cgaaacacgc gcggactcac tctctcggtg atggctttga tcgtaccgcc cttgccggcg
     3481 gcgtcacggc cctcgaacag aatgatgacg cgcagacctt tgtacttcac ccactcctgc
     3541 agacgacaaa gttcaacctg caacttgcgc aactccttct cgtaatcctt ccttttcagc
     3601 ttttggttcg tcccttcggg agcatttttt tgagctttgg ccattagatc gcctatgttc
     3661 gcggagcagc acacgctgac cggggttggg gatcaatcgt ttccgaaggg agtcatcccc
     3721 acgccaccgt catcccgatg tctcccggca tgcctcccgg ccaatcgacg atttggcatc
     3781 gcagccgaaa gccgcgcggc ctcagatatt tctcccaaaa ttggtagagc tctcttggca
     3841 atcctgtcag cgtgttctcc catccgggtt cctgctgatt gattgcccgc cctcgatccg
     3901 tgaatagcgt atttgggaag cggccgacga agacctcggt aagaccgttg tctacggcgc
     3961 gctgaatgat gctggcggcg cgcttgagcc tctcctcgtc cgaaacgccc gatggctttt
     4021 cgaggcgctc cagcaattct ttcttttcgg cttcctcggc tgcttgcccg cgcgcaagcg
     4081 cggatgcctt ctcggcttcg gccaaagcaa tcttcttcct acaatccacc gcagacggga
     4141 tcaggtcgtc aagggctgct accatttcaa tctccaaaac gtggcaaagc tgttatttcg
     4201 atggggctgc cacatttagt ctagcaaacg gacatatgcg cacaatactc tggcatgcga
     4261 tgtgaatgcc agagtacacc aagctcaggg gtgtgtgggg gcgggggaga gctcggccgt
     4321 tttttatcgc acgagctccc ctagaagggc attgataaaa gtcaaatgct ttcaacggtc
     4381 aaaagagatt gtattaaagc ttcgtctcac gtacgccaac atcagtgcac cgtagcagac
     4441 ggtttggctt ttgagcgggc caggaaacgg gcagcagaat caaggcactt cgacgttagt
     4501 tgccggtcgt gaaggtcaat gagggcgttt caggaaagta tatcattctt tatcattgct
     4561 ctgcgaagca cctcaaaaat aacggcagtc gaccaaccaa acaacaacac gccgttcatc
     4621 gccgtcatcg gcccgagcag ccgccaggcc tcaaccggga ctacgtcgcc gtagccgagt
     4681 gtcgtgtagt ttacgaaagc aaaataaacc aggtccgtgc ccgcgggcgc cgcaccgacc
     4741 attgcgtagg ccaccgacca gacaattact tcgcaggcat gcgcaatcat caacaccgaa
     4801 acggttgcaa acatgacgac gatcaaaaac agccacggat gccatctggc tttagcgctt
     4861 accacccgcg ttacccacaa gactactgcc attaccagtg catggatgac aatgttacaa
     4921 gcgcccacag cagcgcccac cgccatttgc tgcaacacac ctgttctccg ctcgctattt
     4981 caaatcttgg cgacatccag ggtcaggcgg tacggtttga ggcatcgtgt cagacaactc
     5041 aggatccaac gaacccctca tgacgtggtg agacgcgtca ccaatcgctc ggccatctcc
     5101 cggtcgataa cttcgaacga acggacggcg cgatcgtacg catacatgct tccggacgcc
     5161 acatcaaacc accatccgct caatcgaagg cgcttggcca ataccctgtc gcggacgatc
     5221 gcgtaagtca tcaggtgttc aagttgcacc aaaacattga gctgagagag ctgatcatag
     5281 gacttcaatt tcgcgtcgag ctcgccttcg tgttccagcc gaaacgccgc tgcatgcgcg
     5341 tg
//
LOCUS       DATILV010000233        10935 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1846928, whole genome shotgun sequence.
ACCESSION   DATILV010000233 DATILV010000000
VERSION     DATILV010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10935)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10935)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10935
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1846928"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(54..269)
                     /locus_tag="VLJ17_05380"
     CDS             complement(54..269)
                     /locus_tag="VLJ17_05380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HSV22444.1"
                     /translation="MAMTGTIKFFNSERGYGFIKPDDGGRDVFVHITAVEHAGLKSLS
                     EGQRVTFDVEPDKKGKGPKAVNLVLSG"
     gene            complement(474..1337)
                     /gene="rlmJ"
                     /locus_tag="VLJ17_05385"
     CDS             complement(474..1337)
                     /gene="rlmJ"
                     /locus_tag="VLJ17_05385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0070475 - rRNA base methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HSV22445.1"
                     /translation="MNYRHAFHAGNFADVFKHIIIARILTHLKEKIAPFRVIDTHAGE
                     GLYDLASEEASLTGEWRDGIGRLTGAALPAEAAELLAPYLTALRARNQADELRYYPGS
                     PLLAQHLLRPQDRLIACELEPRAAAALSRHLRRSATAKAMCIDGWIALEAYVPAKERR
                     GLVIVDPSFEQPDDLIHLADGVTAAHRKWPTGIYLMWYPIKGRDGPDRFIKTLRRAGI
                     KRCLRAEFAVALPQPAGGLNACGVIVVNPPWKLAAEIKLVAPALVDLFGRDCGRSYVL
                     DDLSPDAQASP"
     gene            complement(1432..2103)
                     /locus_tag="VLJ17_05390"
     CDS             complement(1432..2103)
                     /locus_tag="VLJ17_05390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012041971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease T2"
                     /protein_id="HSV22446.1"
                     /translation="MRLAACAAIIGLLGVPGQSAAQGRRQGEPGQFDYYLLVLSWSPS
                     FCADSAERDPARAAQNPQCGPRPFSFVVHGLWPQYERGFPEFCQVPAPRLNRNIVSAM
                     LDLMPAAGLIFHEWDRHGTCSGLSPSAYFETIRKARAVVKIPSQYLDLPAALTVTPEE
                     VEAAFIKANPGLKPEGIAISCGSRRLEEARICLTRDLEFRGCEEIARRTCRRDKLIMP
                     PVRGG"
     gene            complement(2303..2758)
                     /locus_tag="VLJ17_05395"
     CDS             complement(2303..2758)
                     /locus_tag="VLJ17_05395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22447.1"
                     /translation="MGVFQTIGAICIAVAVGASVTSVQAANPLEKNFWLSGPRYDSDV
                     PACTENGPLDKIVARFGAKEFDFWNSALRIVGFEQIREIAWEPWSSGTIPRRFCTASV
                     VISDGKRHRINYSIIEDGGMFGASYGVEWCVVGLDRNWAYNPNCRAARP"
     gene            complement(2830..3588)
                     /locus_tag="VLJ17_05400"
     CDS             complement(2830..3588)
                     /locus_tag="VLJ17_05400"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020176776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HSV22448.1"
                     /translation="MATYDFRSPRLFIAAPLDSDLTVALNAAQIHYLVSVLRMTPGAP
                     LLVFNGADGEWKAHLSGTAKRNIALTVETQTRPQPKPNNLHYLFSPLKRARLDYMVQK
                     AVEMGVSRLHPVIMRHTQAERVKLDRMRANVIEAAEQCGILAIPEVSPPRDFPAAIAA
                     LGQTCHLVFCDEDAPCGDPVAALRADLREAYGNGAELAVLVGPEGGFGEEERATLLGR
                     PRTSRIALGPRILRADTAAVAALAIVQTAAGDWR"
     gene            3837..4439
                     /locus_tag="VLJ17_05405"
     CDS             3837..4439
                     /locus_tag="VLJ17_05405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22449.1"
                     /translation="MGTGPRLSLIFVVTLLPASQAAAQTLPWPTDAPQAAAPAPGAPA
                     ASPRPAPNMSPMGAGPPPPASPFDGGGAMPPCFAEFAKLREEVQKKGLAAKAAGQRKV
                     AREEMCKHISAYSAAELKWVKYTEANVASCGIPVQVVNQMKEVHGHTEQTKEKICAAG
                     PAAGPPSLSDALGTTRLPTQEAAKAGSGTLDTLTGSAIRR"
     gene            4436..5365
                     /gene="ubiA"
                     /locus_tag="VLJ17_05410"
     CDS             4436..5365
                     /gene="ubiA"
                     /locus_tag="VLJ17_05410"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008412 - 4-hydroxybenzoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HSV22450.1"
                     /translation="MNDAMGRVADSTGNWVDRRAPMWARPYLRLARLDRPIGSWLLLI
                     PCWWSAGLAAIAARERGPHLTHLVLFFVGAFAMRGAGCTWNDIVDHDLDDKVERTRLR
                     PIPSGQVSIGGAAMFLVAQALIGLLVLLQFNLLAIATGIASLAIVAVYPFMKRITYWP
                     QIVLGLAFSWGALMGWAAAFGSLDVRPLVLYAGSIAWVIGYDTVYAHQDREDDALIGV
                     KSTALLFGDRTKVMLMIFYGVAVGLIGVAGALAGAGVIFWLGLMAFAAHLGWQIGRLD
                     IGDPDVCLLVFKSNRDAGLILFAGMLADALWRG"
     gene            complement(5373..6155)
                     /locus_tag="VLJ17_05415"
     CDS             complement(5373..6155)
                     /locus_tag="VLJ17_05415"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HSV22451.1"
                     /translation="MPCHAAYIHVFAALATGLILFASTDTARAQNSVHQATLVEPNQK
                     TPEVSTEEVRRILADGSAVLIDSRKRSEYVAGHIAGAKSAMLEPGSPPDASVAAVSRL
                     VDGDKTKPLVLYCNGPHCQASRQLGEQLVAAGFTNVRRYQLGLPMWRTLSGAVEIELE
                     GILRIYRIDQTAVFLDARSEEEFSKRRLPGAHNVPADKLATDGLRKAPMPNNDFNTRI
                     VLFGRDGTQARALADAIGKTPYQNVSYFPGIFEELAAATKVD"
     gene            6308..7102
                     /gene="soxA"
                     /locus_tag="VLJ17_05420"
     CDS             6308..7102
                     /gene="soxA"
                     /locus_tag="VLJ17_05420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0070069 - cytochrome complex [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016669 - oxidoreductase activity, acting
                     on a sulfur group of donors, cytochrome as acceptor
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0019417 - sulfur oxidation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur oxidation c-type cytochrome SoxA"
                     /protein_id="HSV22452.1"
                     /translation="MRNEPRALIGIVCALLFARTPISSHAAEIPPGDRRSGYADMSRE
                     TKAMQDDDTANPGMLAVLDGEALWSRKVGAANRSCADCHNDAAQSMRDVATRYPAFDA
                     RSGRPIDLEGRINLERTERQKAPPLRSESDELLALSAYVARQSRGQPIALPDDERLAP
                     FAAAGREFFNKRQGQLNLSCALCHDDNWGKRLAGNVVPQGHPTGYPVYRLEWQSLGSL
                     QRRLRNCISGMRAEVPGYGAPEYVNLELFLMRRARGMPMESPAVRP"
     gene            complement(7197..8387)
                     /locus_tag="VLJ17_05425"
     CDS             complement(7197..8387)
                     /locus_tag="VLJ17_05425"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007614281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016717 - oxidoreductase activity, acting
                     on paired donors, with oxidation of a pair of donors
                     resulting in the reduction of molecular oxygen to two
                     molecules of water [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA desaturase"
                     /protein_id="HSV22453.1"
                     /translation="MDDQKSDPVSETEGEHDDIIYPSAIPFVLVHLTCIAVIWTGITW
                     QAVAIGVGLYWLRIFAIGAGYHRYFSHRSYATSRLTQFVLAALAQSTAQRSALWWAAK
                     HRHHHLHSDTANDVHSPRHKGFLYSHVGWIFAAKHDMTDLVKIADFARYPELMWLHRY
                     ELVPAVILAVLCFLVAGWPGLIVGFFWSTVLVYHATFSINSLAHVWGKRRYVTGDDSR
                     NNWFLAAFTMGEGWHNNHHAYQSSVRQGFRWWEFDPTYYILKALSWVGLVWDLKSPPA
                     AVLRNEHRLGSRVISRAAAQLAESFQPDRIAVAIGVALDGTSLSALRERLSETQHRAA
                     NVLAHLHLPHLPTRSEVLSRATAMFARTPSIDDIVDQAHALILDAIGARLCPAPAYSN
                     GRRW"
     gene            complement(8637..9191)
                     /locus_tag="VLJ17_05430"
     CDS             complement(8637..9191)
                     /locus_tag="VLJ17_05430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011583349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ActR/PrrA/RegA family redox response regulator
                     transcription factor"
                     /protein_id="HSV22454.1"
                     /translation="MTENLVAAMPGDRTLLIVEDDKSFLQRLARAMEGRGFVVTTAES
                     VADGLTQVEKSAPAFAVVDMRLGDGSGLDVISALKQRRPDARGIVLTGYGNIATAVTA
                     VKLGAVDYMSKPADADDVAAALLALDGHKAEPPANPMSADRVRWEHIQRIYELCGRNV
                     SETARRLNMHRRTLQRILAKRAPK"
     gene            complement(9252..10718)
                     /locus_tag="VLJ17_05435"
     CDS             complement(9252..10718)
                     /locus_tag="VLJ17_05435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ActS/PrrB/RegB family redox-sensitive histidine
                     kinase"
                     /protein_id="HSV22455.1"
                     /translation="MSEIFDEQMPQTLRHVRLDTLVRLRWLAVLGQAAAVLVVYDGFD
                     LEVPFWACLAVIAIYASVNVALRLLFRWNQRLEPEQAARLLALDIVELAVLLFLTGGM
                     QNPFSFLMAGPVFISAAALPKRMTLILGGLVFICATILVRFYYPLPWPEEEPLELPPL
                     YMIGVWLSLMLAIGYISIYAWQIIEESRRLSDALATTELVLTREHYLTQLDGLAAAAA
                     HELGTPLSTILVVASELEREIEPNSRFAEDIRLLREQAQRCRVILGKLAELPAPGEPF
                     ERMKLSALIEEVVAPHRGAGVAIEVEIAKDDPGEPVGARNPAVLYGLGNILENAVDFA
                     RERVQVTATWNEDKVVVVVNDDGSGFPPEIIDRMGEPYVTSERGRRMRGREMPGLGLG
                     FFIAKTLLARSGAKISLKNKQFPQRGAIVRVRWKRVDFERPLIAQLPNDNALELEDAV
                     KKEDESKLPGSPPSGAPQAEGLHKMETPPLAETHLPHN"
     gene            10770..>10935
                     /locus_tag="VLJ17_05440"
     CDS             10770..>10935
                     /locus_tag="VLJ17_05440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018644328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSV22456.1"
                     /translation="MTVPAIAVERLVKIYQRGKAVDGISFALPIGSVTGLLGGNGAGK
                     TTTIAMIMGLL"
BASE COUNT         2084 a         3396 c         3415 g         2040 t
ORIGIN      
        1 gcccgcgaca aacgcgggca tcagaacgtg attcgatcac atcggaatgc gcttcagccc
       61 gatagcacaa gattgacggc cttcggccct ttgccctttt tgtcgggctc gacatcaaac
      121 gtgactcgct gcccttcgct gaggctcttc agtcccgcgt gctccaccgc cgtgatgtgc
      181 acgaagacgt cgcgcccgcc gtcatccggc tttatgaatc cgtacccacg ttcgctattg
      241 aagaatttga tcgtgccggt cattgccatc gggaaaactc ctgtccccgt ggttgcgcgc
      301 cgccggccct acagcacggc ggcaggtccg acattcgcca tttggaaggt catcgacctt
      361 acatgacctc tgtcagtctg cggtcccgca atcggagacc gccccacggg cacgcgaatg
      421 tcagggccct cgccggccag cctaacatac gtatcgtgct ctgaaagggg gctttacggg
      481 ctcgcttggg cgtccggcga aaggtcgtcg agcacgtagc tgcggccgca gtcgcgccca
      541 aagagatcga ccagtgccgg tgcgacgagc ttgatctcgg cggccagctt ccagggcgga
      601 ttcaccacaa tcacgccgca ggcattcaat ccgccagccg gctgcggcag cgccacagcg
      661 aattcggcgc gaaggcatct ttttatgccg gcgcgccgca gcgtcttgat gaaacgatcc
      721 ggaccgtcgc gcccctttat cggataccac atcaaataga tgccggtcgg ccatttacgg
      781 tgcgcggccg tgaccccgtc agcaaggtgg attagatcgt ccggctgttc gaatgatgga
      841 tcgacaatta cgagtccgcg gcgttccttg gccggcacat aggcctcaag cgcgatccag
      901 ccgtcgatgc acatcgcttt ggccgtcgcg gacctgcgca gatgacgcga tagcgcggct
      961 gcggcacgtg gctcgagctc gcaagcgata agacgatcct ggggacgcag tagatgctgc
     1021 gccagcagcg gagaccccgg atagtaccgc agctcatcgg cctgattgcg ggcgcgcaga
     1081 gccgtaaggt agggcgccag gagttcggcg gcctccgccg gcaatgcggc accggtaagt
     1141 cggccaatgc catcgcgcca ttcgccggta aggctcgcct cttcgctggc cagatcgtag
     1201 aggccttcgc ccgcatgggt gtcgatcacc cggaacggcg caatcttttc cttcaggtgg
     1261 gtaagaatgc gggcgatgat gatgtgcttg aacacgtcag caaagttgcc cgcatgaaag
     1321 gcatggcggt agttcattgg tggagccgtc gcgcgggcgt caatggcggt tgacgatgcg
     1381 tggggcgggg aggccgggca ggttgccgcg atggccggcg cgtcttagcc attagccgcc
     1441 gcgcaccggc ggcatgatga gtttgtcgcg ccggcaggtg cgacgcgcaa tctcttcaca
     1501 gccgcggaat tcaagatcgc gggtcagaca aatcctggcc tcttcaagcc gccggctgcc
     1561 acaggaaatc gcaatgccct caggcttgag ccccggattg gctttgatga aagccgcttc
     1621 gacctcctcg ggcgtgaccg tcaaggccgc aggcaggtcg aggtattgag aaggaatttt
     1681 caccaccgcc cgggccttgc gaatggtttc gaaataggcg ctgggagaca ggcccgaaca
     1741 ggtgccatgg cggtcccact cgtgaaaaat gagtcccgcc gccggcatca ggtcgagcat
     1801 tgcggacacg atgttgcgat tgagccgggg agctggcact tggcagaatt ccggaaatcc
     1861 ccgctcgtat tgtggccaca ggccgtgcac cacgaacgaa aaaggccgcg gtccgcattg
     1921 cgggttttgc gccgcgcggg ccggatcgcg ctcggcgctg tcggcgcaga acgatggcga
     1981 ccacgacagc accagcaggt aataatcgaa ttgtccgggc tcgccttgac ggcgaccctg
     2041 agcggccgac tgccccggca cacccaacag gccgatgatc gccgcgcagg cggcaagacg
     2101 cacgaatgcg ggcgacacga tttcccccaa gctaagccgg gacgctgtcg atttccatca
     2161 ttgcggcgcg ccgcgcagcg gcctcgttgt gtgttccagg ctccctcgct acgctcgggg
     2221 aacaaggctg gttcgttagg ggcacaaccc tgagattaga acgtatggag caaaccgttg
     2281 cgccgccgaa ccgcgccgcc ggtcacggcc gcgctgctct gcaattcgga ttgtaggccc
     2341 agttgcgatc aagaccgacg acacaccatt cgacgccata gctggcaccg aacatgccgc
     2401 catcctcgat gatcgaataa ttgatccgat gccgcttgcc gtcggaaatc actacggaag
     2461 ccgtgcaaaa gcgccgaggt atcgtacccg acgaccacgg ttcccaggcg atctcgcgga
     2521 tttgttcgaa tccaacgatt cggagcgccg aattccagaa gtcgaattcc ttcgcaccga
     2581 atcgcgccac gattttgtcg agcggaccat tttcggtgca tgccggcacg tcgctgtcgt
     2641 atcgcggacc cgataaccag aaattctttt cgagcgggtt cgccgcctgc acggacgtga
     2701 cggacgcacc gaccgcgacg gcgatgcaaa tcgccccaat agtttgaaag acgcccatgg
     2761 tcccctccgg tccctcaagt ggagacggtg ccgcgccgcg acgtccgggt caagtgaaga
     2821 aatgcacttt catcgccaat cgccggccgc ggtttgcaca atcgcgagcg ccgccaccgc
     2881 cgccgtgtcg gcgcgcaaga tgcgcggacc gagtgcgatc cgcgacgtcc gtggccgacc
     2941 gaggagggta gctcgctcct cttcgccgaa tcccccctcc gggccgacca gaaccgcgag
     3001 ttccgcacca ttaccgtatg cctcgcgcag gtcagcacgt aaagccgcga ccggatcgcc
     3061 gcacggggca tcctcgtcgc agaataccag gtggcatgtc tggccgagtg ccgcgatagc
     3121 ggctgggaaa tcgcgtggcg ggctgacctc ggggatggcc aggataccac attgctccgc
     3181 ggcttcgatg acgttcgccc gcatgcggtc gagcttgacg cgctccgcct gggtgtgacg
     3241 catgatcacg gggtgcaacc gcgaaacccc catctcgact gccttttgca ccatgtagtc
     3301 gagccgggcc cgcttgagcg gcgaaaatag gtagtgcagg ttgttcggct tcggctgcgg
     3361 ccgggtctga gtctcgaccg tgagggcgat gtttcgcttc gctgtcccgc tgagatgcgc
     3421 tttccattcg ccgtctgccc cattaaagac aaggagcggg gcccccggcg tcatgcgcag
     3481 cacgctcaca agatagtgga tttgggcggc gttcaacgca accgttaggt ctgagtcgag
     3541 cggtgcggca ataaacagcc gggggctgcg aaaatcgtag gtcgccatga aattcaggtc
     3601 cggatattgc ttttcaagcg attgcgttgg acgaaacggt cgaatcgagc gcatgattga
     3661 gccgaggtcg tataccgcga cttgaccggg cccgctgcgg gcttatttcg ggcggtttcc
     3721 agacattctg ccgccgtgtc gccgaaatca gggggttgat tgtacctcga taaccgagtc
     3781 aaaaccgcat caggcgcatc cgctacgacg ccgatcaagg atgggagaac ttcgtcatgg
     3841 ggacaggtcc gcgcctttcc ctcatttttg tggtgacgct gctgccggcg agccaggccg
     3901 ccgcccagac gctgccttgg ccgactgacg ccccgcaggc cgccgcgccg gcgcccgggg
     3961 cgccggcggc ctcgcccagg cctgcgccca acatgtcgcc gatgggagca ggtccgccgc
     4021 caccggcttc gccgttcgac ggcgggggcg caatgccacc ctgctttgcc gagttcgcga
     4081 agctgcgtga agaggtgcaa aaaaaaggcc tcgccgccaa ggcggcaggt cagcggaaag
     4141 tcgcccgcga ggagatgtgc aaacacattt cggcgtatag cgccgctgaa ttgaaatggg
     4201 tcaagtacac cgaagcgaat gtcgcatcgt gcggcattcc ggttcaggtg gtgaaccaga
     4261 tgaaggaagt gcacggccac actgagcaaa ccaaggaaaa gatctgtgcg gccgggcctg
     4321 cggccgggcc tccgagcttg agcgatgcgc ttggcaccac acggctgccg acgcaggaag
     4381 ccgccaaagc gggcagtggc acccttgata cgctgaccgg gagcgccatc cgaagatgaa
     4441 cgacgcgatg gggcgcgtcg cggattcaac cggcaactgg gtcgatcggc gggcgcctat
     4501 gtgggcgcgg ccatatctgc gtcttgcccg gctcgatcgg ccgatcggct cctggctcct
     4561 gctcattccg tgctggtggt cggcaggcct ggcggcgatc gcagctcgcg agcgcggccc
     4621 tcatctgacc cacctcgtcc tgttcttcgt cggcgcgttc gcaatgcgcg gcgccggctg
     4681 cacctggaac gatatcgtcg accatgatct cgacgacaag gtcgagcgca ctcgcttgcg
     4741 gccgatcccg tccggtcagg tgagcattgg tggagcggcc atgttcctgg tcgcacaggc
     4801 gctcattggc cttctcgtgc tgctgcagtt caacctactt gcgatcgcga ccggcatcgc
     4861 gtcgcttgcg atcgtggcgg tgtatccgtt catgaaacga attacctatt ggccgcagat
     4921 cgtgctcggc ttggcgtttt cctggggcgc cctgatgggc tgggctgctg ccttcggcag
     4981 cctcgatgtc cgcccgctgg tgctctatgc gggctcgatc gcctgggtga tcggctatga
     5041 tacggtctac gcccaccagg atcgcgagga cgatgccctg atcggcgtca agtcgaccgc
     5101 gctcctgttc ggcgatcgga ccaaggtgat gctgatgatc ttctatggtg tcgcagtcgg
     5161 cctgatcggc gtcgcgggcg cactcgcggg cgccggcgtg atcttctggc tcggccttat
     5221 ggctttcgcg gcgcatcttg gctggcagat cggacggctc gatatcggcg atcccgacgt
     5281 ttgccttttg gtgttcaaat ccaaccgtga tgccggcttg attttgtttg ccgggatgct
     5341 ggcagacgcc ttatggcgcg ggtagcgccg tatcaatcca ccttggtggc tgccgccaac
     5401 tcttcgaaga tgccggggaa atacgatacg ttttggtatg gcgtctttcc gatcgcgtcg
     5461 gcgagcgcgc gcgcttgcgt gccgtcgcgg ccgaacagca cgatgcgcgt attgaagtca
     5521 ttgtttggca tcggcgcttt gcgcagcccg tcggtggcga gcttatcggc tggcacgttg
     5581 tgcgcgcccg gcagccgccg ctttgaaaac tcttcctccg accttgcatc gaggaatacg
     5641 gcagtctgat cgatccggta gatccgcagg atgccttcca gctcgatctc gacggccccg
     5701 ctgagggtgc gccacatcgg taatccaagc tgatagcgcc gcacattggt gaacccggcc
     5761 gcgaccagct gctcaccgag ctgcctgctg gcctggcaat gcgggccgtt gcagtacagc
     5821 acgagcggct tagtcttgtc gccgtcgacg aggcggctaa ccgcagccac cgaggcatcc
     5881 ggcggcgaac ccggctctag catggcgctc ttcgcccccg cgatgtgccc cgctacgtat
     5941 tcggagcgct tgcgtgaatc aatcagaacg gcgctgccat cggccaaaat gcggcgcacc
     6001 tcctcggtgc tgacttccgg cgtcttctgg ttcggttcga caagcgtcgc ttgatggacg
     6061 ctgttctgcg cgcgcgccgt gtcggtcgag gcgaagagaa tgaggccagt cgcgagtgca
     6121 gcaaagacgt gaatataggc ggcatgacaa ggcatggagg ctcctgcatc ggcgtccggc
     6181 agctaggcct ggactcctta attggacccg gaccggtgtg aatggtaggg gtttttggga
     6241 ccagttggaa ccggcattct ggggagggcg cgatgccctg accgcaaaaa gcgagggcag
     6301 aagagaaatg cgcaacgagc cccgcgccct gataggcata gtctgcgcgc tccttttcgc
     6361 gcggacgccg atctcatccc atgcggccga gatcccacct ggagatcgcc gctcgggcta
     6421 tgcggacatg agccgcgaga ccaaggcgat gcaggacgac gatactgcca accccggcat
     6481 gctggcggtg ctcgatggcg aggcgctgtg gagccgcaag gtgggcgccg ccaaccgttc
     6541 ctgtgcggat tgtcacaacg acgcagcgca gagcatgagg gacgttgcca cgcgctatcc
     6601 ggcatttgat gcccgcagcg gcagaccgat cgacctcgaa gggcgtatca atctggagcg
     6661 caccgagcgc cagaaggcgc cgccgctgcg cagcgaaagc gatgagctgc tggcgctgtc
     6721 cgcctatgtg gcgcgccagt cgcgcggcca gccgatcgca ctgccggacg acgaacggct
     6781 cgcacccttc gcggccgccg gccgggagtt tttcaacaag cgccagggcc agctcaacct
     6841 gtcatgtgcg ctctgccatg acgacaattg gggcaagcga cttgccggca acgttgtgcc
     6901 gcaagggcat ccgaccggct atccggtcta ccggctcgaa tggcaaagcc tcggctcgct
     6961 gcaacgtcgg ctgcgcaact gcatctcggg catgcgggcg gaagttcccg gctacggcgc
     7021 acccgaatac gtgaacctcg agcttttcct gatgcggcgt gcgcgcggca tgccgatgga
     7081 atcgccggcg gtgcggccct gatacaccgc ccgacgcagc gcatatgagc ttgccggagc
     7141 ctattggggg cggctggcgc ccgggcaccc cgcccggcga tctattgatc gtttccttac
     7201 caacgccggc cgttgctgta cgccggagcg gggcagagcc gcgccccgat ggcgtcgagg
     7261 atcagcgcat gcgcctgatc gacgatgtcg tcgatcgaag gcgtccgggc aaacatcgcc
     7321 gtcgcgcggc tcagcacctc gctgcgcgtc ggcaaatgcg gcaggtgcag gtgcgctaac
     7381 acattggcgg cgcggtgctg ggtttcggaa agtctttctc gcagcgcaga caagctcgtg
     7441 ccgtcaagcg ccacgccgat cgcgaccgcg atgcgatcgg gctgaaaact ctccgccaac
     7501 tgcgcggcgg cgcgactgat gacccgtgag cccaaccgat gctcgttgcg cagcaccgcg
     7561 gcaggcggcg acttgaggtc ccacaccagc ccaacccacg acagcgcctt gaggatgtag
     7621 taggtcgggt cgaattccca ccaacggaac ccttggcgga cgctgctttg gtaggcgtga
     7681 tgattgttgt gccagccttc ccccatggtg aacgcggcca gaaaccagtt gtttcgcgaa
     7741 tcgtcgccgg tcacgtagcg cctctttccc cacacatggg caagcgagtt gatagaaaac
     7801 gtcgcgtggt agaccaaaac cgtgctccag aagaagccga cgatgagacc cggccatcca
     7861 gcaacgagga agcaaagaac ggcaagaatg accgcgggta ccagctcgta tctgtgtaac
     7921 cacatcaatt ccggatagcg cgcgaagtcg gcgatcttta cgaggtcggt catgtcatgc
     7981 ttggcggcga agatccatcc gacatggcta tacaaaaagc ctttgtggcg aggcgagtgc
     8041 acgtcgttcg cggtatcgga atgcagatgg tggtgccgat gcttggccgc ccaccacagc
     8101 gcgctgcgct gcgccgtgct ctgcgccagc gcggcgagca cgaattgggt caaacggctg
     8161 gtcgcgtagg aacgatgcga gaagtatcga tggtatccag ccccgatggc gaaaattcgc
     8221 aaccagtaaa gcccgacccc tattgcaacg gcttgccagg tgatcccggt ccagatgacc
     8281 gcgatgcacg ttagatgcac caacacgaac ggtatggcgg atggataaat gatatcgtca
     8341 tgctcaccct cggtttcgct caccgggtcg gacttctgat catccattga gtttggacct
     8401 cgttcttgaa tgtgaaagct tcgtaaccat tctctgcacg cgactcgggg ccaccgcgcc
     8461 acgcttgcgc acaacgccgt accaatgtca tcgcccggct tgaccgggca agtacctggt
     8521 cggtgtttac tggctcgccc ggccaagccg ggcgatgaca acatggtgga tgtcaacgcg
     8581 atcgaacgaa gctttagcgg aggaggcgac caaatgtcta ttcggatgaa gtctagttat
     8641 ttgggagcac gctttgccag aatccgctgc agcgtgcggc gatgcatgtt gagacgtcgc
     8701 gccgtttctg agacattgcg cccgcacaac tcatagatgc gctggatatg ctcccatcgc
     8761 acccggtcgg ctgacatcgg attggcgggc ggctcggcct tgtggccgtc gagcgccagg
     8821 agcgccgccg ccacgtcatc cgcatccgca ggtttcgaca tgtagtcgac cgcgccaagc
     8881 tttaccgcag ttaccgcagt cgcgatattg ccgtatccgg tgagaacgat gccgcgggca
     8941 tcaggccggc gctgcttgag cgccgaaata acgtcgagac cgctgccatc cccaaggcgc
     9001 atatcgacga cggcgaacgc cggggcggat ttttccacct gagtgagacc atcggcgacc
     9061 gattcggcgg tcgttactac aaatccgcgg ccttccatgg cccgggccag acgttgcagg
     9121 aacgacttgt cgtcctcgac gatcagcagc gtacgatcgc ccggcatcgc cgcaacgagg
     9181 ttttccgtca tgatggttgt gcctcggtga atgaacgctt caacagcacg gtacccgccc
     9241 agaccttata tttagttatg cggcaaatgg gtttcggcaa gaggaggcgt ttccatttta
     9301 tggagacctt cagcttgcgg tgcacccgac ggtggtgaac ctggcagttt tgattcgtct
     9361 tcttttttta ctgcgtcctc caattcgagc gcattgtcat tcggcagttg agcgatcagc
     9421 ggacgttcga aatcgacccg tttccagcgc acccggacaa tcgcgccacg ctgcgggaat
     9481 tgtttgtttt tcaatgatat tttcgcgccg gatcgagcca gcagcgtctt cgcaatgaaa
     9541 aagcccaatc ccagccccgg catctctctc ccacgcatgc gccggccccg ctcgctcgtc
     9601 acataaggct cgcccatgcg gtcgatgatt tccggcggaa aacccgatcc gtcatcatta
     9661 accacgacga cgactttgtc ttcgttccat gtcgccgtaa cctggacacg ctcgcgggcg
     9721 aagtccaccg cgttttcgag gatgtttccg agcccgtaga gcacggctgg attacgcgcc
     9781 ccgaccggct cgccggggtc gtccttggca atctcgacct cgatggcgac gcccgcccca
     9841 cgatgcggcg ccaccacttc ctcaatcaag gcggagagtt tcatccgttc gaacggctcg
     9901 ccgggagcag gcagttcggc aagcttgccg aggatgaccc ggcaacgctg ggcctgctcg
     9961 cgcagcaggc gaatgtcctc ggcaaaccgt gaattgggtt cgatctcgcg ctccaattcg
    10021 ctggccacca ctagaattgt ggaaagtggc gtgccgagct catgggcggc ggccgccgcc
    10081 aagccgtcga gttgtgtcag gtagtgttcg cgggtcagca ccaattcggt ggttgccaag
    10141 gcatcggaga gccggcgcga ttcctcaata atttgccacg catagatgct gatgtagccg
    10201 atcgccaaca tcagcgagag ccacacaccg atcatgtaga gaggtggcag ctcgagcggc
    10261 tcctcttccg gccacggcaa cggataatag aagcgcacca atatggtagc gcaaatgaag
    10321 acaagaccac cgaggatcag cgtcatccgt ttgggcagcg ccgcagcgga aataaaaacg
    10381 gggcccgcca tcaaaaacga gaatggattc tgcatgccgc cggtgagaaa cagcagtacc
    10441 gcaagctcaa cgatgtcgag cgccaaaagc cgcgcagcct gctccggctc gaggcgctgg
    10501 ttccagcgga atagcaaccg cagtgccaca tttaccgacg cgtagattgc aatgaccgcc
    10561 aagcaggccc agaaaggcac ttcaaggtcg aagccgtcat acacgacgag aaccgcggca
    10621 gcctggccga ggaccgcaag ccagcgcagt cgcacaaggg tatcgagccg cacatggcgc
    10681 aaggtctgcg gcatttgctc gtcgaatatt tcggacatga tgcgaccata atatcagaag
    10741 caaggacacc gcaataaaag agtgatggta tgacggttcc tgccatcgcc gtcgaacggc
    10801 ttgtgaaaat ctatcagcgc ggcaaggccg tcgatgggat cagctttgcg ttgccgatcg
    10861 gctccgtcac cggcctgctg ggcggcaacg gggccggaaa gaccaccacc atcgcgatga
    10921 taatggggct cttga
//
LOCUS       DATILV010000234         4444 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4400952, whole genome shotgun sequence.
ACCESSION   DATILV010000234 DATILV010000000
VERSION     DATILV010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4444)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4444)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4444
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4400952"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..487)
                     /locus_tag="VLJ17_05445"
     CDS             complement(<1..487)
                     /locus_tag="VLJ17_05445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011442991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSV22457.1"
                     /translation="MSGIRVEAYTFDKGVVEKAYAGWAPIYDVVFGAVFAPGRAAAVR
                     AAERVGGRVLDVGVGTGISLSQYSSRNRIVGIDLSEPMLRRAKARMRRHPLTNVETLA
                     VMDAERLGFADESFDVVVAQFVITAVPDPEAALDEFARVVKPRGEIVLVNHLGAETGL
                     RR"
     gene            complement(504..1703)
                     /gene="mnmA"
                     /locus_tag="VLJ17_05450"
     CDS             complement(504..1703)
                     /gene="mnmA"
                     /locus_tag="VLJ17_05450"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HSV22458.1"
                     /translation="MRNSLDIEGRPQDTRVVVAMSGGVDSSVTAALLKAEGYDVVGVT
                     LQLYDHGAATHRKGACCAGQDIHDARMVAGNIGIPHYVLDYESRFKEAVMDRFADSYV
                     AGETPVPCVDCNQAIKFRDLLMTARDLGAKVLATGHYVASRALPTGGRALYRAREEER
                     DQSYFLFATTPEQIDFLRFPLGDLTKAQTRELARHFVLPVAEKADSQDICFVPTGRYA
                     DMIARLRPGAAAAGDIVDLSGRVLGRHAGIINFTVGQRRGLGIAAGTPLYVVRLDATN
                     NRVVVGPREALRTTRVQLRDVNWIGDGSLNSVTAGGRIDVFVKVRSTRPPHPAWLMCG
                     AAGIELEFADGEEGVAPGQACALYDAGAGQARMLGGGFIRSAVPRSEIDAIAAMRSKQ
                     ERVAARE"
     gene            complement(1774..2016)
                     /locus_tag="VLJ17_05455"
     CDS             complement(1774..2016)
                     /locus_tag="VLJ17_05455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22459.1"
                     /translation="MASIDTVSTAGASSTERYRRLCCKRQAILWGKKSSNKTGCYQIS
                     PLFIAAIVGQALQAARQEMPGSPGVMPTLHEAATHL"
     gene            1991..3649
                     /locus_tag="VLJ17_05460"
     CDS             1991..3649
                     /locus_tag="VLJ17_05460"
                     /inference="COORDINATES: protein motif:HMM:NF014207.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HSV22460.1"
                     /translation="MLTVSIDAIAVPPHAFVRGGTADQRGPDQHSPFASFLSAQSDNP
                     PPAATQEVATQEKAPASSPVAQADSPSRQPTNAPSSAQNGQSAGIAEPSSNKAKGITN
                     AAPVATDRPTVAKAKIAPKAVGPDSAGLILPATASPTSPSQAPAAPPAQISTAAAAAA
                     DVTKAAVAAATPSVTGGSDTDIKEDTDTKEEAANGDPAAANDSAAQLATAPASTTQNS
                     QPGANADLPANSQTVATVTPAPTLNAEPNANGPGNDELAVIADAPARIDRPSPSVPPP
                     RPAPPLPIASDAAETPITADPSRKTASPNDGGDSQHKTIAIPPNETAAPPAATARLAH
                     PPFTLPAPGTEQAPTTTNVSINGPTAPQSAGIEPDDRPRNVVQLPDSLAVQTQTAAVA
                     STAVITNSTAASPPNQPAVAPVPVAEVAVSIAMQAQSGKSRFEIRLDPPELGRIDVQL
                     NVDSRGNVSSRLVVERPDTLNLLVRDAPQLQRTLQDAGLNIAGGMQFSLADQGFANRS
                     SFAQQNEPTKPRTIRNMSGDTVPVAALQGYAARSSRHGGLDITV"
     gene            3674..4384
                     /locus_tag="VLJ17_05465"
     CDS             3674..4384
                     /locus_tag="VLJ17_05465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012042110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook capping FlgD N-terminal
                     domain-containing protein"
                     /protein_id="HSV22461.1"
                     /translation="MTSILPGMGNTVTSATAAAPPSGATTDTASGSGVNTKTIAGNFQ
                     TFLTLLTKQLQNQDPTNPLDTNQFTQQLVEFAQVEQQLRSNDQLAALVSLQQTAQSTQ
                     ALNFVGENVTVKSDTAQLANGSATWTMSSSKPSSATLNISNSSGQLVYSSTMTLQAGA
                     NTFKWNGQGNNGTQWPDGTYTIAVTAKDSSGQSVDVSTVVTGIVNSVDLTKNPPVLSV
                     NGQNFTVSQIQSVSRSGP"
BASE COUNT          961 a         1563 c         1191 g          729 t
ORIGIN      
        1 cgcgtcgcag cccggtctcg gcaccaagat gattgaccaa tacgatctcc cctcttggct
       61 tgacaacgcg agcaaactca tccagggccg cctccggatc gggcaccgcc gtaatcacga
      121 attgtgccac caccacgtcg aaggactcat ccgcaaatcc gagccgctcg gcgtccatca
      181 ccgcgagtgt ttccacattg gtgagcggat gcctgcgcat acgagccttg gcgcggcgta
      241 gcatcggctc cgaaagatcg atgccgacaa tccgattgcg ggacgaatat tgggaaagcg
      301 aaattccggt accaaccccc acgtcgagga cacgtccacc gacgcgctcc gccgccctca
      361 cggccgccgc acgacccggc gcgaatactg cgccgaacac cacatcgtag atcggcgccc
      421 agcccgcata ggctttttcg accaccccct tgtcgaacgt atacgcttcg accctgatcc
      481 cgctcatcgc cccacccgtc tcgttactct cgcgccgcaa ccctctcctg tttcgatcgc
      541 atcgctgcta tggcgtcgat ctcgctgcgc ggcaccgccg agcggatgaa gccgccgccg
      601 agcatgcgtg cctgaccggc gcccgcatca tacaatgcgc aggcttgacc gggagcgacc
      661 ccctcttcgc cgtcggcaaa ctccaactca atgccagcag caccgcacat gagccaagcc
      721 ggatgtggag gacgcgtcga gcgcaccttg acgaagacgt caatacgccc gccggccgtc
      781 acggagttaa gcgaaccgtc cccgatccag ttcacatcgc gcaactggac ccgcgtggtg
      841 cgcagcgcct ctcgggggcc aaccaccacc cggttgttgg tggcatcgag ccgcaccacg
      901 tagagcggcg ttccggccgc aataccaagg ccgcgtcgct ggccaaccgt gaaattaatg
      961 atgccggcgt gacgacccag cacccgcccc gaaaggtcaa cgatgtcacc cgccgcagcc
     1021 gcgccaggcc gcagccgtgc gatcatgtcg gcataacggc cggtcggcac aaagcagatg
     1081 tcctggctgt ctgccttttc tgcgaccggc aacacaaaat ggcgggccag ctcgcgggtt
     1141 tgggccttgg tgagatcgcc cagcgggaag cgcaggaagt cgatttgctc tggtgtcgtg
     1201 gcaaacaaaa aatagctctg gtcgcgctcc tcctcgcggg cgcgatagag cgcccgccct
     1261 ccagtcggca acgcgcgaga ggcaacgtaa tgcccggtcg ccaacacttt cgcaccaagg
     1321 tcacgggccg tcatcaacaa gtcccgaaac ttgatggcct gattgcagtc gacacaaggg
     1381 accggagttt cacccgccac gtagctgtcg gcgaaacggt ccatcaccgc ttccttgaag
     1441 cgactctcat agtcgagaac gtaatgcggt atgccaatgt tgcccgccac catgcgcgca
     1501 tcgtggatat cctggccggc gcaacaggcg cccttgcgat gcgtcgcagc gccatgatcg
     1561 tacaactgca gcgtaacgcc gaccacatcg taaccttcgg ccttgagcag cgcagccgtg
     1621 accgaggagt cgacaccgcc cgacatggcg acaacgaccc gcgtatcctg cggccgacct
     1681 tcgatatcga gactgttgcg catctgccga ccggccgctc ctagcgggat gtctcccggc
     1741 tgatccgagg cgtcccttca atgcttccca ttactatagg tgcgtggcag cctcatgcaa
     1801 cgtcggcatt acacctggcg agcccggcat ttcctgccgg gcagcctgca aggcttgccc
     1861 gacgatcgcg gcaataaaaa gcgggctgat ttgataacag cctgttttat ttgatgattt
     1921 tttgccccac agaatggcct gacgcttgca gcaaagcctc cgataacgct ctgttgacga
     1981 ggcccccgcc gtgctgaccg tatcgatcga tgccattgca gtgccgccgc acgcgtttgt
     2041 ccgcggcggc acggcggatc aacgcggccc ggaccagcac tctccattcg cgagctttct
     2101 aagcgcgcag tcggacaatc cgcctccggc cgccacccag gaggtcgcta cccaggagaa
     2161 agcgccggcc tcctcgcccg tggcacaggc agatagtcca tcccgccaac ctacaaatgc
     2221 cccctcctct gcccagaatg ggcagtctgc cgggatcgct gagccctcat ccaacaaagc
     2281 aaagggtata accaacgcag cgcccgtcgc aaccgatcgc ccgacggttg caaaagccaa
     2341 gatcgccccc aaggctgttg ggccggattc agccggtttg attttgccgg cgacagcttc
     2401 gccgacatcc ccctcccaag cacctgctgc tccgccagcg cagatatcga cggcggcggc
     2461 cgcagcagcg gacgtaacca aggcagccgt cgccgccgca accccatcgg tcaccggcgg
     2521 ctccgatacg gatataaaag aagatacgga tacaaaggaa gaagctgcca acggcgatcc
     2581 cgcggccgcc aacgattcgg ccgctcagct cgccaccgcg ccggcctcca ctacgcagaa
     2641 ttcgcagcct ggcgctaatg ccgacctgcc tgcgaactcg cagacggttg cgaccgttac
     2701 tccggcgcca acgctaaacg ccgagcccaa tgccaacgga ccgggcaatg atgagctcgc
     2761 ggtcattgct gacgcgcccg caaggattga caggccgtca ccttcggtgc cgcccccaag
     2821 acccgcccca cctctgccca tcgcatccga tgcggcggaa acaccaatca cggcggaccc
     2881 atcccgcaag accgcatcgc caaacgacgg cggtgactcg cagcacaaaa caatcgcgat
     2941 tccaccaaac gaaacggccg ctccgcccgc tgccacggct cggctggctc atccgccatt
     3001 tactctgccg gcccctggaa ccgaacaggc gcccacgaca accaatgtca gcatcaacgg
     3061 acctaccgcg ccgcaaagcg ccggcatcga accggatgat cgcccacgca acgttgtcca
     3121 gctaccggat tccttggccg ttcaaactca gacggcggcc gtagcaagca ccgcagtgat
     3181 aaccaattcg accgcggcct ccccgccgaa tcaaccggca gtagcccccg tgccggtcgc
     3241 cgaggtcgct gtatcgattg ccatgcaggc ccaatccggg aaaagccggt ttgaaattcg
     3301 cctcgatcca cctgaactcg ggcgcatcga cgtgcagctc aatgtcgaca gccgcggaaa
     3361 tgtcagttcg cggcttgtcg tcgagcgtcc cgatacgctc aacctgttgg tccgcgacgc
     3421 gccgcagctt cagcgtacgc tccaggatgc gggactcaac atcgccggag gcatgcagtt
     3481 ctcgctggcg gaccagggat tcgcgaaccg cagcagcttt gctcagcaga acgaacccac
     3541 aaaacctcga acgatccgca acatgtccgg cgacacggtg ccagtcgcag ccctacaggg
     3601 atatgccgcc cggtcgagcc gccacggcgg cctcgacatc acggtctaac gtccgacaga
     3661 ggaggtcgaa accatgacta gcattctgcc aggtatgggc aatacggtca cttcggcaac
     3721 cgccgcagcc cccccatccg gtgcgaccac cgacactgcc tccggttcag gcgtcaacac
     3781 caaaacgatt gccggcaatt tccagacctt tttgacatta cttaccaagc agctgcagaa
     3841 ccaggatccc accaatccgc tcgacaccaa ccaattcacc cagcaattgg ttgaattcgc
     3901 ccaggtcgag cagcagctca gatccaatga tcagctcgcg gccctcgtgt cgttgcagca
     3961 aaccgcccaa tctactcagg cgctgaactt tgtcggcgaa aatgtcaccg tgaaaagcga
     4021 cacggcgcag ctagccaacg gctctgcgac ctggacgatg tcgtcgtcga aaccatcgtc
     4081 cgccacgctc aatatatcga attcaagcgg tcaactcgtt tattccagca ccatgacctt
     4141 gcaggccgga gcgaatacct tcaaatggaa cgggcagggc aacaatggca cgcaatggcc
     4201 agacggaacg tacaccatcg cggtcactgc aaaagattcg tccggacaat cggtcgacgt
     4261 atccacggtc gtcaccggca tcgtgaattc ggtcgacctc accaaaaatc cacccgtgct
     4321 ctcggtcaac ggccagaact tcaccgtcag tcagattcag agcgtgagcc gaagcggacc
     4381 atgagacacc gccggccggc aacagactga tcggtcagcc gtccgataat ctaaacaatc
     4441 ttac
//
LOCUS       DATILV010000235         2017 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_825969, whole genome shotgun sequence.
ACCESSION   DATILV010000235 DATILV010000000
VERSION     DATILV010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2017
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_825969"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..271
                     /locus_tag="VLJ17_05470"
     CDS             <1..271
                     /locus_tag="VLJ17_05470"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HSV22462.1"
                     /translation="GNREGQDGRRHLHPDVIDRVLRKYAGKIGLSRGYSAHSMRATFI
                     TTALENGASLEDVQSAAGHADPSTTKLYDRRGYNPEKSASFFANY"
     gene            362..1741
                     /locus_tag="VLJ17_05475"
     CDS             362..1741
                     /locus_tag="VLJ17_05475"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSV22463.1"
                     /translation="MLGKVFDRFVEKSPISVMVRGTLERVLGAGQLDAWFARTAQKQY
                     TRTVLFSTVYDILSQVVFRIKPSVRAAYRDHEDTVGASLISVYNKLNGVETHTSAALV
                     RYSAAVLTPLIEQLDGARAPWLPGYRVKVLDGNCIEASERRLKVLREVQAGALPGKSL
                     VVYEPTAGLVSDVFPCEDGHAQERSMLGQVLETVQAHDLWIQDRNFCTCAFLCTIDNR
                     DAGFITRQHEGLPFEVVTTLRPVGRIETGQVAEQRVQVWDAQGQAHLFRRIRVKLDQA
                     TRDGDRVLYILTNLPLRKASAKRVARLYRKRWTLETAFQHLEAYFHSEINTLGYPKAA
                     LFGFCLALVAYNMLAVVMAALRSVHGEETIDHDLSLYYVANEIAQTYHGMMIAIPEDA
                     WRVFSRMRPAELVATLKMLARKVRLKAYRKSPRGPKKPRPKRDGTTKAPHVSTAKLLR
                     EQQVSAVAL"
     gene            complement(1761..>2017)
                     /locus_tag="VLJ17_05480"
     CDS             complement(1761..>2017)
                     /locus_tag="VLJ17_05480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HSV22464.1"
                     /translation="RRLACWYTPKHGSGLNIAENELRALTRQCLHDRRCGETKQRAEE
                     PAAWSTSSNAKQRGVDWQFKINDARTKLKSLYPALLRCDL"
BASE COUNT          390 a          564 c          629 g          434 t
ORIGIN      
        1 gggaaatcgt gagggccagg acggccgccg gcatctgcat ccggatgtga ttgaccgcgt
       61 gttgagaaag tacgccggga agattgggtt gagcagagga tactcggcgc actcgatgcg
      121 tgcgacgttc atcaccacgg ctttagagaa tggggcgagc ttggaggatg tgcagtcagc
      181 ggccggtcac gcagatcctt ctacgacgaa gctgtatgat cggcgggggt acaatccgga
      241 gaagtcggcg agtttttttg cgaattatta gagccctgtg ccagccctgt taaggtgatc
      301 ttgccactct ctttttgtta tcctctgggc cttctatcca gactctctga aggaggccac
      361 catgctcggc aaagtgttcg accgttttgt ggaaaaaagt cccatttccg taatggtgcg
      421 tggcacgcta gaacgcgtct tgggcgcggg ccaactcgat gcctggtttg cccggacggc
      481 ccagaagcag tatacccgca cggtgttgtt ttcgacggtc tatgacatcc tcagccaagt
      541 cgtctttcgc atcaagcctt cggtgcgtgc ggcgtatcgg gaccacgaag acacggtcgg
      601 ggcctcgctc atctcggtct ataacaaact caacggggtc gagacgcaca cctcggcggc
      661 gttggtacgt tatagtgcgg cggtgttgac gccgttgatc gagcagctcg atggggcgcg
      721 tgcgccctgg ttgccggggt atcgggtgaa agttctggat ggcaattgta ttgaagcgag
      781 tgagcgacgc ctcaaagtgt tgcgcgaggt gcaggccggc gccttgccgg gcaaatccct
      841 cgtcgtgtat gagcccacgg ctggcctcgt gagcgatgtc tttccctgtg aagacggcca
      901 tgcgcaagag cgctcgatgc tcgggcaggt gctggagacc gtgcaagcgc atgacctctg
      961 gatacaagac cgcaatttct gtacctgtgc cttcctgtgc acgatcgaca accgggacgc
     1021 cgggttcatc acccgccagc atgagggact cccctttgag gtggtcacga cgctgcgccc
     1081 ggtgggtcgc atcgagaccg gtcaggtggc ggagcaacgg gtgcaggtat gggatgccca
     1141 gggacaggcc catctgtttc ggcggatccg ggtgaagcta gatcaggcga cgcgcgatgg
     1201 tgatcgcgtg ctgtacattc tgaccaatct cccccttcgc aaggcctcgg ccaaacgggt
     1261 ggcccggtta tatcgcaagc gctggacgct ggagaccgcg ttccagcatc tcgaagcgta
     1321 cttccattcg gaaatcaata cgttgggcta tcccaaggcc gccttgttcg gcttttgcct
     1381 ggccttggtc gcctacaata tgttggcggt ggtgatggcg gcgttgcgca gcgtgcatgg
     1441 cgaagaaacc atcgaccacg acctctccct ctactatgtc gccaacgaga tcgcccaaac
     1501 gtatcacggc atgatgattg ccatcccgga ggatgcatgg cgcgtcttca gccgcatgcg
     1561 tcccgcggag ctcgtcgcca ccctgaagat gttggcgcgg aaggtccgcc ttaaggccta
     1621 tcgcaaaagt ccccgcggac cgaaaaagcc tcggccgaaa cgcgatggta ctaccaaggc
     1681 accccatgtc tccaccgcga aactgctcag ggagcaacaa gtcagtgcgg tggcactgta
     1741 atatgtctag aatcaaaagg ttacagatca caccttaaca gggctgggta gagggacttg
     1801 agtttggtgc gcgcgtcgtt gattttgaat tgccaatcga ctccgcgctg cttcgcgtta
     1861 ctggacgttg accacgcggc gggttcctcg gcacgttgct tggtttcgcc acaccggcgg
     1921 tcgtgcaaac attgacgcgt caacgcacgg agttcgtttt ccgcgatgtt gagcccactg
     1981 ccgtgcttgg gcgtgtacca acatgcgagc cgccgga
//
LOCUS       DATILV010000236         7413 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1336378, whole genome shotgun sequence.
ACCESSION   DATILV010000236 DATILV010000000
VERSION     DATILV010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7413)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7413)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7413
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1336378"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..421
                     /locus_tag="VLJ17_05485"
     CDS             <1..421
                     /locus_tag="VLJ17_05485"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HSV22465.1"
                     /translation="FPVCSPRLIAQLGPVTTIEALLDLPLLHDSSTEGDGSGSDWQSW
                     LNHVGWSEAACDDGQRFSEAGLLIDAAVLGLGVALARASLVSDHIENETLICPLRLAA
                     PTAFEYYLLGLPEAAALQKIVHFRNWLQVEAAAAAAT"
     gene            554..1576
                     /gene="waaF"
                     /locus_tag="VLJ17_05490"
     CDS             554..1576
                     /gene="waaF"
                     /locus_tag="VLJ17_05490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HSV22466.1"
                     /translation="MSAGSPILIVPYMWIGDFVRCHTVVGLLRGRFPDRPIDILTTRM
                     VAPLVDYMPGVRKGIVFDLPRKRIALSRHRALADLLRAERYGDALIMPRTWKSALAPF
                     LAGIPRRTGFIGEMRFGLLNDLRGGEKALPRMVDRCAALALPKQAPLPQDLPLPQLAV
                     PDDALPQWRARMNLPTNGQPIAVLAPGAVGPSKRWPGFGALAARLAQQGFDVWMVGGP
                     DEKALAAEIVRHAPQTRDLTGADLRNAILALAAATVAISNDSGLLHVAAAIGTPSIGI
                     FGPTSPWHWAPLNPLAAVMETKTDVPCRPCHKPTCRLRHHRCMQDIPVEQVATAVRGT
                     VASRPA"
     gene            complement(1583..2962)
                     /locus_tag="VLJ17_05495"
     CDS             complement(1583..2962)
                     /locus_tag="VLJ17_05495"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HSV22467.1"
                     /translation="MKHVLGRIDTRGQIVLLAVLAAYFMVWPIWRIGFPIEISQNEGW
                     NAYHADAAMGAAPLYPSTDTLIVNNYPPLSFYVVGGLAQVFGDALYVGRMLSLLAVAA
                     LGGLIAAAIRQLGGGGAGAAVGGLWFVAVMARSFARFVGMNDPQLVAHVLMMSALVWF
                     LAREAHRKSTVPPVLAMVAAGFYKHNVVAVPFTALLWLAIKDWRSAVLPIAIGAGAAA
                     LGLVICMAAYGDVFLANLLTARPYRAMRAINGLGRLQWILPALVFWGIWVATDWNNRA
                     ARFTTLFVVVAFAVYLLQWSGEAIRDNAQFDLVIATAIGLGLAFDRAGATAFGRRHGE
                     AAARVGIILVVAVRLVATLRIEPALALFDPDYRAQYFANAQVVREEAARIAKIPGPVA
                     CDYKVVCRLAGKPFSYDDFRAEMLVATGASGGLDEQGLMRAHGLTYVHNDPRGGIEML
                     YRAIVGHPK"
     gene            complement(2962..3939)
                     /gene="waaC"
                     /locus_tag="VLJ17_05500"
     CDS             complement(2962..3939)
                     /gene="waaC"
                     /locus_tag="VLJ17_05500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase I"
                     /protein_id="HSV22468.1"
                     /translation="MAEILFIKTSSLGDVVHHMPAITDARRHLPDARMAWVVEEDYVP
                     LARLHPGVDEVIPVATRRWRGKLFTPNTWREILGFRNIIRARSYQATIDTQGLLRTAV
                     IANNVRGTKHGYDRASIREPLACRFYDVRHRVKWHAHAIVRNRALCGLALGYEPKQPL
                     DFGLDRAAIARTAANVKPYAVLIHATAQSGKLWAQAHWVAVARGIRDRGFDVVLPWGA
                     TAERARSVAIATAAGIGQGLDHVPDRRPLDAVAAQIAGASFVIGVDTGLVHVAAALGV
                     PLVAIFIDSEPGLTGPMGAGPIAVVGGKGAAPAPLQVLHALDRVLGSAP"
     gene            4088..5074
                     /gene="galE"
                     /locus_tag="VLJ17_05505"
     CDS             4088..5074
                     /gene="galE"
                     /locus_tag="VLJ17_05505"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014493902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003978 - UDP-glucose 4-epimerase activity
                     [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HSV22469.1"
                     /translation="MTILVTGGAGYIGSHMIHALIEAGEDVVVLDNLSTGFKWAIPNG
                     VPLIIGETGDETLVDRLIAEHGVSAIIHFAASIVVPDSVSDPLGYYRNNTVNSRALIE
                     CAVKGGVEQFIFSSTAAVYGNPAKVPIVEDDAVAPMSPYGSSKLMTEIMLRDAGMAHG
                     LDYVILRYFNVAGADPKLRTGQSTKGATHLIKVAVETALGKRAKMDVFGTDYPTPDGT
                     CVRDYIHVADLVRAHCDALAYLRAGGRSVTLNCGYGHGFSVLDVIGAVKRVSGVDFRV
                     DHAGPRPGDVVRIVAQSDRARELLGWRPQFDDLATIVTHALAWERKLTTLQN"
     gene            5184..5894
                     /locus_tag="VLJ17_05510"
     CDS             5184..5894
                     /locus_tag="VLJ17_05510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HSV22470.1"
                     /translation="MSADASRFVIPPPPQAALAIAGSDQLFPVRRIWCVGRNYLEHIK
                     EMGQDEREPPFFFAKPPDAIVPDGATVPYPSLTKDLHHEVELVVALKDGGRFLKAATA
                     NDLIWGYGVGIDLTRRDLQIASRDIKRPWEIGKAFDASAPCGPLTPASQTSHPTKGRI
                     TLKCNGQLRQDGDLAQMIWKVPEVIEKLSEMVALAPGDIIMTGTPSGVAATVPGDKLE
                     CEVAGIGKLTVTMGPALK"
     gene            complement(5933..7231)
                     /locus_tag="VLJ17_05515"
     CDS             complement(5933..7231)
                     /locus_tag="VLJ17_05515"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HSV22471.1"
                     /translation="MAHHDALTDLPNRTLLLERLGEALHSRRQIDHHCAVFILDLDRF
                     KDVNDTLGHPVGDALLRQVANRLRECVGESDTIARLGGDEFAILQSLPNGDLVSDALA
                     RRILEVISEPFDLEGHLVCIGTSIGIAVGPKDGTDPDQLLKNADLALYRAKNLGRGTH
                     HFFEPALDELMQARRTLERELRGAIVNQEFELHYQPLVNLERDEICGFEALLRWNKPG
                     RGRVSPADFIPLAEETGLIVQIGQWVLRQACREAKAWPDDLTIAVNVSPAQFKNRQFV
                     STVVAALAASGLSASRLELEITESVVLEDSDSAFATLNQLHTLGVRLALDDFGTGYSS
                     LTSLRKFPFDKIKIDRSFVSDISDESANALAIVRSVAGLGTGLGMTTTAEGVETQHQL
                     DHVRAMGCTEFQGYLYSPPKPAHEITQLIERTRKKKSSAA"
BASE COUNT         1423 a         2420 c         2210 g         1360 t
ORIGIN      
        1 ctttccggtg tgtagtccgc gtcttatcgc gcaacttggg ccggtgacga cgatcgaggc
       61 gctgctcgac ctgccgcttc ttcacgattc atcgacggaa ggtgatggca gtggctcgga
      121 ttggcagagc tggctcaacc acgtcggctg gagtgaggcg gcctgcgacg acggccagcg
      181 tttcagcgaa gccggtctgc tgatcgatgc agcggtcctc ggattggggg tcgccctcgc
      241 ccgcgccagc ctggtttccg atcatatcga gaacgaaacg ttgatctgtc cgctccgtct
      301 ggccgcaccc actgcatttg aatattacct tctcgggttg ccagaagctg ccgcgctcca
      361 gaagatcgtt cactttcgca actggttgca ggtcgaagcc gcggcagctg ccgcaacatg
      421 aggaccgcgg tgcgacatcg aaggtcaaca ggctgatttt ccgcgtatgc gccgatttca
      481 gcccgcgccc gcaacgaatg ggccgccgct acccgggttg ccctccagcg gatgttttgg
      541 cagttatgcc gccgtgagtg ccggcagtcc catcctcatc gtgccatata tgtggatcgg
      601 cgacttcgtc cggtgtcata cggtcgttgg gctgctgcgt gggcgttttc ccgaccggcc
      661 gatcgacatc ctgaccaccc ggatggtggc accactcgtc gattacatgc cgggcgtccg
      721 caagggcatc gtgttcgacc tgccgcgcaa gcgcattgcg ctgtcccggc accgcgccct
      781 cgccgacctt ttgcgtgctg agcgctacgg cgacgcgctg atcatgccgc gaacctggaa
      841 atccgctctg gcgccgtttc tcgccggcat tccgcgccgc accggcttta ttggcgaaat
      901 gcgattcggt ctcctcaatg acctgcgtgg cggcgaaaag gcgctgcccc gaatggtcga
      961 ccgctgcgcc gcgctcgcgc tgccgaagca agcccctttg ccgcaggatt tgccgttgcc
     1021 gcaactcgcc gtgccggacg atgccctgcc gcaatggcgt gcgcgaatga atcttccgac
     1081 gaatggccag cccatcgccg tgctggcccc cggcgccgtc gggccatcga agcgatggcc
     1141 gggctttggg gcgctagcgg cgcgccttgc ccaacagggt ttcgatgtct ggatggtggg
     1201 tggccccgac gaaaaggcgc tggccgccga gatcgtccgc catgcccccc aaactcgcga
     1261 ccttacaggc gccgatttgc gcaacgccat cctggcgctt gcggcggcga ccgtggcgat
     1321 atcgaacgat tccggcttgc tgcacgtggc ggcggccatc ggcacaccgt cgattgggat
     1381 attcgggccg accagcccct ggcactgggc accgctcaat ccgctcgccg ccgtgatgga
     1441 aaccaagacc gacgtgccgt gccggccgtg ccacaagccg acgtgccggt tgcggcatca
     1501 ccgctgcatg caggacatcc cggtagaaca agtcgcgaca gcagtgcgtg ggacggtggc
     1561 gtcgcggccg gcctaggctg agctattttg ggtgtcccac gatggcgcgg tacagcattt
     1621 caatgccacc gcgcggatca ttatggacgt aggtgaggcc gtgggcccgc atgagcccct
     1681 gttcgtcgag gccgcctgag gcgccggtcg ccaccagcat ttcggcacga aaatcgtcat
     1741 aggagaacgg tttgccggca agccgacaca ccaccttgta gtcgcaggcg accggaccgg
     1801 gaattttcgc aatacgcgcg gcctcctcac gcaccacttg cgcattggcg aaatattgcg
     1861 cgcggtaatc cgggtcgaac agcgccagcg ccggctcgat ccgcaaggtg gcgacgagcc
     1921 tcacggccac caccagtatg atgccaaccc gcgccgcggc ttcaccatgc cggcggccga
     1981 acgccgtcgc gcctgcgcga tcgaaagcga ggccgagacc gatcgcggtt gcgatcacaa
     2041 gatcgaactg ggcattgtcg cggatcgctt ccccgctcca ctgcaggaga tacaccgcaa
     2101 acgcaaccac cacgaacaac gtggtgaaac gtgcggcacg gttgttccaa tctgtcgcga
     2161 cccagattcc ccaaaatacc agcgccggga gaatccattg caagcgccct aatccgttga
     2221 tcgcccgcat ggccctatag ggccgggcag tcaggagatt ggccagaaac acatcgccat
     2281 aagccgccat gcagatcacc aaccccagtg ccgcggcgcc ggccccaatg gcgattggca
     2341 gaacggcgga ccgccaatcc ttgatggcga gccacagcag ggcggtaaac ggtaccgcca
     2401 ccacgttatg cttgtagaac cccgccgcca ccatggcgag gaccggcggt accgttgact
     2461 tgcggtgcgc ctcgcgagcc aaaaaccaaa cgagcgcgct catcatcaga acatgagcga
     2521 ccaactgggg atcattcata ccgacaaaac gggcgaacga gcgcgccatc acggccacga
     2581 accatagccc gcccaccgcg gcccccgcgc cgccgccgcc gagttgccgt atcgccgcgg
     2641 cgatcagtcc accaagcgcc gccacggcca acagcgacag catccgcccg acataaagtg
     2701 catcgccgaa aacctgcgca agcccgccga ccacgtagaa agacagcggc ggatagttgt
     2761 tgacgatcaa cgtgtcggtc gacgggtaga gcggtgccgc ccccatggcg gcatcggcgt
     2821 gataggcgtt ccagccctcg ttctgcgaga tctcgatcgg aaagccgatg cgccatatgg
     2881 gccacaccat gaaataggcg gcgagcaccg cgaggagcac gatctgccca cgggtatcga
     2941 tgcgccccaa gacgtgcttc attacggcgc cgacccgagg acgcggtcaa gcgcgtgcaa
     3001 gacttgcaag ggcgcgggcg ccgctccctt gccgccgacc accgcaatgg gccccgcccc
     3061 catgggaccg gtcagccccg gctcgctatc gatgaaaatc gccaccagcg gcacgccaag
     3121 cgccgccgcg acatggacga gaccggtgtc cactccgatg acgaaagatg cacctgcgat
     3181 ctgcgccgcg accgcatcga gtggccgacg atccggcacg tgatcaagcc cctggccaat
     3241 gccggcagcg gtcgctatcg ccacactacg agcgcgctcc gcggtggcgc cccatggcag
     3301 cacgacatcg aagccgcgat cgcggatgcc gcgtgccacc gcaacccaat gtgcctgcgc
     3361 ccacaacttg cctgactggg cggtcgcatg aattaggacc gcatagggct taacgttcgc
     3421 agccgtgcgg gcaatggcgg cacgatcgag gccgaaatcg agcggctgtt tcggctcgta
     3481 gccgagcgcg agcccgcaca gcgcacggtt gcgcacgata gcgtgagcgt gccatttgac
     3541 ccgatgacga acgtcgtaga atcggcacgc cagcggctcc cggatgctgg cacggtcgta
     3601 gccatgcttg gttccccgca cattgttggc aattacggcg gtgcgcagca gtccctgggt
     3661 atcgatcgtc gcctggtaag accgcgcccg gatgatgttg cggaaaccaa ggatttcacg
     3721 ccatgtgttg ggcgtgaaca gcttcccgcg ccagcgccgg gtcgcgaccg ggataacttc
     3781 atcgaccccc ggatgcaggc gggcgagcgg cacatagtcc tcctccacca cccaggccat
     3841 ccgggcatcg ggtaaatgcc gccgcgcgtc cgtaatggcc ggcatatggt gcacgacgtc
     3901 gcctagcgaa gaggtcttga tgaacaaaat ctcggccatc ggcgggcggt tttccctggc
     3961 aactctgtgc gttggcgctc gctcttatac gcagcggggg ggtttgtcac ccgacgcgac
     4021 gccatctgca ctaacgtgat attcaggccc ctccgttagg ataacggcaa cccatacgag
     4081 caaccccatg accatcctgg ttaccggcgg cgccgggtat atcggcagcc acatgatcca
     4141 tgcccttatc gaagccggcg aagacgtggt cgtactcgac aatctgtcca ccggattcaa
     4201 atgggcgata cccaatgggg ttccgctcat cattggcgag accggtgacg aaacattggt
     4261 cgaccgcctg atcgcggagc atggagtgtc cgccatcatc cattttgcgg cgtcgatcgt
     4321 ggtgccggat tcggtgtccg atcccctcgg ctattaccgc aacaatacgg tgaactcacg
     4381 cgccttgatc gaatgcgccg tcaagggcgg cgtcgagcag ttcatcttct cctcgaccgc
     4441 agcggtttac ggcaatcccg ccaaggtgcc gatcgttgag gacgatgcgg tggctccgat
     4501 gtcgccctac gggtcctcga agctcatgac cgagatcatg ctgagggacg ccggcatggc
     4561 gcacggcctt gattacgtca tcctgcgtta cttcaacgtc gccggtgccg accccaagct
     4621 gcgcacaggg caatccacca aaggcgcgac ccaccttatc aaggtggcgg ttgagaccgc
     4681 tctcggtaag cgcgccaaaa tggatgtgtt cggcaccgat tacccaacgc ccgacggcac
     4741 ttgcgtccgc gactacatcc acgtcgccga tctggtgcgc gctcattgcg atgcccttgc
     4801 ctatctgcgg gcgggcggcc ggtcggtgac gcttaactgc ggctacggcc acggattttc
     4861 cgtgctcgac gtgatcggtg ccgtcaaacg cgtatccggc gtcgattttc gcgtcgatca
     4921 cgccggtccc cgacctggcg atgtggtacg gatcgtcgcg caatcggacc gcgccagaga
     4981 attgctcgga tggcggcctc aattcgacga tctcgccacc atcgtgaccc acgcactcgc
     5041 ctgggagcgc aaactcacga cgctgcagaa ttgacgatcg acattgacgt tccgacccct
     5101 tccgtctatt cggcacgtcg tgggcgccgg ccggcacggt tgccaccagc ctcggtcatt
     5161 tcactccagt cagaagacat cccatgagcg cagacgcctc ccgctttgtt atcccgccgc
     5221 cgccccaagc cgccctggca attgccggca gcgaccagct attcccggtg cgccggatct
     5281 ggtgcgtcgg tcgcaactat ctggagcaca tcaaggaaat gggccaggac gagcgcgagc
     5341 cgccgttctt cttcgccaag ccccccgacg cgatcgtgcc ggatggcgca acagtgccct
     5401 atccctcgct caccaaggac cttcaccatg aagtggagct tgtggtggcc ctcaaggacg
     5461 gtggtcgttt cctcaaagcc gcgaccgcaa acgacttgat ctggggctat ggtgtcggca
     5521 tcgacctcac ccgccgcgat ctgcaaattg cttcgcgcga catcaagcgg ccgtgggaaa
     5581 tcggcaaggc tttcgatgca tcggcgccct gcggcccgct taccccagcc tcgcagacca
     5641 gccatccgac gaaagggcgc atcaccctca aatgcaacgg ccagctccgc caagacggcg
     5701 atctggcaca gatgatctgg aaggtgccag aggtgatcga gaagctctcc gagatggtgg
     5761 cgctcgcgcc cggcgacatc atcatgaccg gcacaccttc cggcgtcgcc gcgacggtgc
     5821 cgggcgacaa gctcgaatgc gaggtcgcgg gcatcggcaa gctgacggtg accatggggc
     5881 cggcgttgaa gtgacagagc tggaggacgc cgccatcaat taccgacgac ccttatgcgg
     5941 cggaactctt ctttttgcgg gtgcgttcaa tgagctgcgt gatttcatgc gcgggcttag
     6001 gtggagaata caaatagccc tgaaattcgg tacaccccat tgcgcgcaca tgatcaagtt
     6061 gatgctgtgt ttcgacgcct tcggcggttg tggtcatgcc gaggccggtt ccgaggccgg
     6121 ccacggagcg cacaattgca agagcattgg cgctctcgtc tgatatgtcc gagacgaagc
     6181 tgcgatcaat cttgattttg tcaaacggga acttgcgcaa acttgtcaac gacgagtaac
     6241 cggtgccgaa atcgtcgagc gccagccgca cgcccagcgt atgcagttgg ttgagcgtcg
     6301 cgaaggcact gtcgctgtct tccagcacga cggattcggt gatttccagt tcaagtcggc
     6361 tcgcagacaa cccgctggcc gctaatgccg ctacaaccgt tgatacgaac tggcggtttt
     6421 tgaattgcgc cggtgagaca ttgacggcga ttgtgagatc atcaggccac gctttcgcct
     6481 cacggcaagc ttgtcgcaac acccactgac caatctgaac gattaagccc gtctcttcag
     6541 ccaacggaat aaaatcagca ggcgaaaccc gcccccgtcc gggtttattc cagcgcagca
     6601 gcgcttcaaa tccgcagatc tcgtcacgtt ccaaattgac gagcggctga taatgcagct
     6661 cgaattcctg attgacgatt gcaccccgaa gctctcgttc gagagtcctg cgcgcttgca
     6721 tgagctcatc gagcgccggc tcgaagaaat gatgcgtacc ccggcctaaa ttcttggcgc
     6781 gataaagggc gagatctgcg ttcttcaaga gctggtctgg atctgttccg tccttcggcc
     6841 ccacagcgat tccaatgctg gtgccgatgc acacgagatg gccttcaagg tcgaacggct
     6901 cgctgatcac ctccaagatt cgcctggcca gtgcatctga cacgaggtct ccgttcggca
     6961 agctctgcaa tatcgcaaac tcgtcccctc ctagtcgcgc aatcgtatcg ctttcaccca
     7021 cacactcacg caaacggttg gccacctgtc gtagcaacgc atcgcccact gggtgaccga
     7081 gcgtatcgtt cacatcttta aatcgatcga gatcgagtat gaagacggca caatggtgat
     7141 cgatctgccg tcggctgtga agtgcttccc ccagccgctc gagcaggagc gtgcgatttg
     7201 gcaggtcggt cagcgcatcg tgatgcgcca tgtgggcgat ctttgcctct atgcgcaagc
     7261 gatcggtaat gtcatcgtgc gtagcgatcc aaccgccccc gggcctcggc cgatgcgaga
     7321 tgcagatcac ctttccgttg gcgagatgtt ggattttcgt tcctagcctg tcttgccggc
     7381 cagcagcgac atggtcgtcc ggcaagtaaa tgg
//
LOCUS       DATILV010000237         1509 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_311904, whole genome shotgun sequence.
ACCESSION   DATILV010000237 DATILV010000000
VERSION     DATILV010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_311904"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            297..1277
                     /locus_tag="VLJ17_05520"
     CDS             297..1277
                     /locus_tag="VLJ17_05520"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV22472.1"
                     /translation="MTGRHLALLLAAGAAVWSVTAEAQPYPARPITIVVPYAAGGVFD
                     TMARIIGARMGELLGQSVIVENVTGAGGIIGVQHVINAKPDGYTVLLGSVGTHAYNQS
                     IYRKRRYDAVSDFTPVTLFSDSQMVLEGRKDLPANNLAEFIALLKQNGTKMQYGSAGV
                     GSTTHLACALLNARIGVDVTHVPYRGGGPAANDLIGGHIDYMCGNIANSVARAAAKQS
                     KPLALLSRERTPLMPELATAHEQGITDYDVVTWTAFFLPKGAPKDIVAKLNEATHAAM
                     DTPAIKTRFNAIGVVGIAPERRGPEYLAKYVVEEIARWEGPIKAAGLQVD"
BASE COUNT          301 a          454 c          474 g          280 t
ORIGIN      
        1 ggcggacatt gcgccatgtc cgaaaagtgc caacttcgga cctaccccga aggaaggctc
       61 cgtgcccccg cgagctccgc cgagggccgc ttcgggtcaa tcgcgtcggt ctgtccatgg
      121 accagcgacg tccggtccac cccggtaagc agactgttcc agagtcggtc cggacttcgc
      181 gttaggacca aagtcagatc gcccgcatgg ccactgcccc ctccgatgga ggtgtcaggc
      241 ggcgcaagac aggctagtct ctaacgctcg gagctctcca agatcgggag cgatgaatga
      301 caggacggca tcttgcgttg ctgctggctg ccggggcggc ggtctggtcg gttacggcgg
      361 aagcgcaacc ctatccagcg cggcccatca ccatcgtggt gccctacgcg gccggtggtg
      421 tattcgacac gatggcccgc atcatcggag cgcggatggg cgaactgctc ggccagtcag
      481 tgatcgtgga gaacgtgacc ggcgcagggg gcatcatcgg cgtacaacac gtgatcaatg
      541 ccaaaccgga cggctatacg gtgctgctcg ggagtgttgg cacccacgcc tacaatcaat
      601 cgatataccg aaagcgccgc tatgatgcgg tgagcgactt cacccctgtc acgctcttct
      661 ctgacagcca gatggtgctc gaaggccgca aggacctgcc cgccaacaac cttgcggaat
      721 ttatcgcgct gcttaaacag aacggcacga agatgcaata cggctcggca ggcgttggat
      781 cgactacgca tcttgcttgc gcgctgctca acgcgaggat cggcgtcgac gtgacccacg
      841 ttccctatcg gggtggcggg cctgccgcga acgacctgat cggcggccac atcgattata
      901 tgtgcggcaa catagctaac tctgtggcgc gtgccgccgc aaagcaatcg aagcccctcg
      961 cgctgttgtc gcgcgagcga acgccgctga tgccggagct tgcgaccgcg cacgagcagg
     1021 gtatcacgga ctacgatgtc gtgacttgga cggctttctt cctgccgaaa ggcgcgccga
     1081 aggacattgt cgccaagctg aacgaggcaa cccatgccgc aatggacacg cctgcgatca
     1141 agacacggtt taacgccatc ggcgtagtcg gcattgcacc tgagcggcgc gggcccgaat
     1201 accttgccaa atatgtggtt gaggagatcg cgcgctggga aggtccgatc aaggctgccg
     1261 gtttgcaggt ggattgatgc tggtttctgt gcgtcagcgc acacgcagga tgtccgctca
     1321 gggtcaaaac cggaaaagct cgacgcgagc aaatgttttc cgctttgccc ccgaaagcgg
     1381 acatgacgct acgcactcgg tatgtccgtt tcgtgccgat tttgttgcag aagtcggttg
     1441 aaggcttccg cgaacaatga ttccctgacg ttgacgcggt cagcggcggg aacgggccat
     1501 gatgggtcg
//
LOCUS       DATILV010000238        10110 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4401332, whole genome shotgun sequence.
ACCESSION   DATILV010000238 DATILV010000000
VERSION     DATILV010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10110
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4401332"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1337
                     /locus_tag="VLJ17_05525"
     CDS             <1..1337
                     /locus_tag="VLJ17_05525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HSV22473.1"
                     /translation="APGIKSSRVIGLADDIARSMSALSARVAVVSGRNVIGIELPNPT
                     REKVYLRELLADGDYAGSGAKLALCLGKTIGGESVIVDLARMPHLLIAGTTGSGKSVA
                     INTMILSLLYRLRPEQCRLIMVDPKMLELSVYDGIPHLLAPVVTDPKKAVVALKWAVR
                     EMEDRYKKMAKLGVRNIDGYNVRLAEARSRGEVLSRTVHTGYDPESGDAIYEKEEFDQ
                     EPLPYLVVIVDEMADLMMVAGKDIEGAIQRLAQMARAAGIHVILATQRPSVDVITGTI
                     KANFPTRISFQVTSKIDSRTILGEQGAEQLLGQGDMLYMVGGGRISRIHGPFVSDDEV
                     EKIVRHLKSQGQPHYLEAVTAEDDTEGEDGAVFDATGMGDTEGGDLYQQAVQIVTRDR
                     KASTSYIQRRLQIGYNRAATLIERMEREGVVGQPNHAGKREILVGGEDNEGY"
     gene            1442..2167
                     /locus_tag="VLJ17_05530"
     CDS             1442..2167
                     /locus_tag="VLJ17_05530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein carrier protein LolA"
                     /protein_id="HSV22474.1"
                     /translation="MGWIRLAALVSVMLIAAPIIGVAQSVPLPQPAPKNRNQVTRSPT
                     TDAAGRPIPVRPGEAVPYDGSQRALVDRVSNYLSTLQTLIGDFVQVGPDGTRTTGKFY
                     IQKPGKVRFEYEPPSPIDVIADGSSVVVRDRRLATQDLYPLSQTPLRYLLADQIDLAR
                     DTNLVGVSQDNTFITVTIEERQLLVGTHRLVLMFGAKDVQLRQWTVTDPQGYDTTVAV
                     YNLDVSHKPDPNLFTISYENRFQ"
     gene            2309..3124
                     /locus_tag="VLJ17_05535"
     CDS             2309..3124
                     /locus_tag="VLJ17_05535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018459654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HSV22475.1"
                     /translation="MKLKITTWNINSVRLRINLVTKFLKIERPDVICLQETKCPDDKF
                     PLRRFTRLGYTHAALNGQKGYHGVAILSRLPFESIDARSYCGKSDSRHLAVKIGNHAG
                     LAEQVTLHNFYVPAGGDEPNPTINEKFAHKLAFLDEMRVALDMRLGNNDRAILVGDLN
                     VAPLEHDVWSHKQMLKVVSHTPIECEKLTAVQRAGKWLDVLRSYVPEPTKLYTWWSYR
                     AQDWEAADRGRRLDHVWVSPALAARVLGMRITKQARGWTQPSDHVPVTAIIKL"
     gene            complement(3165..3629)
                     /locus_tag="VLJ17_05540"
     CDS             complement(3165..3629)
                     /locus_tag="VLJ17_05540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HSV22476.1"
                     /translation="MTIEDDIDFLQRVPTFAHLGFSALQIIAIGSETKHLADGEILFR
                     AGETTDAGYLIQEGSLKLTIHDPRRSDPSVRFGPGALIGELALLTETVCPATAIAAEP
                     TTVIRISRSLFRKVLEGFPEAARLMRERIVEYVNLASEEISKVRGVLERPNP"
     gene            complement(3649..4335)
                     /locus_tag="VLJ17_05545"
     CDS             complement(3649..4335)
                     /locus_tag="VLJ17_05545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016841446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV22477.1"
                     /translation="MTTARRILIVDDDAELREALVEQLSLHEEFEAISVDTGTKGVQA
                     AKGGQIDLIIMDVGLPDIDGREAVRMLRKNSYKAPIIMLTGHDTDSDTILGLESGAND
                     YVTKPFRFAVLLARIRAQLRQHEASEDAVFTIGPYSFQPSSKLLMSNKGNKVRLTEKE
                     TAILRFLYRAGQRSISREILLQEVWGYNSGVTTHTLETHIYRLRQKIEKDAAMPEILV
                     TEAGGYKLVP"
     gene            4470..4991
                     /locus_tag="VLJ17_05550"
     CDS             4470..4991
                     /locus_tag="VLJ17_05550"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HSV22478.1"
                     /translation="MLANVNVRTRPGNRRQGWLLAGHWRIKVALGRSGIKANKREGDG
                     ATPAGRYRLVRLWWRRDRWSRPQTLLPVRPIGVADGWCEAPSDRRYNRAIRILPGQPA
                     DRLWRSDDLYDLVIEMDHNTRPRISGRGSAVFIHVARAELAPTAGCIALPIAILKTFV
                     SHLGPKTRITIQY"
     gene            complement(4988..5671)
                     /locus_tag="VLJ17_05555"
     CDS             complement(4988..5671)
                     /locus_tag="VLJ17_05555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HSV22479.1"
                     /translation="MIAPHHDPVTSLNAVRREIDLACQAAGRLSDSVTLLAVSKAYGA
                     DAIEPVIAAGQRVFGENRVQEANAKWPVLRERYADLKLHLIGPLQSNKAQDAVALFDA
                     VHSVDRPSLCAAMAKAIQKKGRTPLMFVQVNTGAEPQKAGVLPEDADAFIALCHALYD
                     LKICGLMCIPPVDEAPAPHFALTAKIAARNGLTLLSMGMSADFTVAIRFGATHVRVGT
                     AIFGHRVSA"
     gene            5780..8401
                     /gene="leuS"
                     /locus_tag="VLJ17_05560"
     CDS             5780..8401
                     /gene="leuS"
                     /locus_tag="VLJ17_05560"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HSV22480.1"
                     /translation="MSIERYNARAAESRWQQVWDTQNVFATRNEDPRPKYYVLEMFPY
                     PSGRIHMGHVRNYAMGDVVARYKRARGFNVLHPMGWDAFGMPAENAAMANRVHPRTWT
                     YENIAAMKAQLKSMGLSLDWNREIATCDPSYYKHQQRLFLDFLAAGLVERKHSRVNWD
                     PVDQTVLANEQVIDGRGWRSGALIEQRELFQWFLKITNYSQDLLGALDQLDRWPEKVR
                     LMQKNWIGRSEGLLIRFALDPETLPSVESELEVFTTRPDTLFGAKFMAVAPDHVLALA
                     AATKNEKVAEFIAECMRRGTAQELIETAEKKGIDTGIRAIHPFDPNWRLPVYVANFIL
                     MEYGTGAIFGCPAHDQRDLDFVNKYGLGNTPVVCPPGQDPKSFVITDIAYDGDGRMIN
                     SRFLDGMTIAEAKEEVTRRLEKESRGNRPVAQRQVNFRLRDWGISRQRYWGCPIPIIH
                     CNNCGIVPVPEKDLPVTLPEDVTFDQPGNPLDHHPTWKHIHCPQCGSPAQRETDTMDT
                     FVDSSWYFARFTDPWIESRPTDRKAVDAWLPVDQYIGGIEHAILHLLYSRFFARAMHA
                     TGHARIDEPFAGLFTQGMVVHETYRSNAGWVAPAEVKVEVAGDVRRATLLQTGETVEI
                     GPIEKMSKSKRNTVDPDDIIGTFGADTARWFMLSDSPPERDVIWTEEGVQGAWRFVQK
                     LWRLINEATEFVRGTATTRPPVFSDVAISVRKAAHGALAKVSEDLEKLRFNRCIAHIY
                     EFANSLQAVLATSSRGERDIGFAVREAAEIMVQLFHPMMPHLAEECWAALGHTTLLAN
                     QSWPAVENDLLVEDTITLPVQVNGKKRADVTIARDARNVDIEASVLALDAIKRALGGK
                     APRKVIIVPQRIVNVVA"
     gene            8388..8954
                     /gene="lptE"
                     /locus_tag="VLJ17_05565"
     CDS             8388..8954
                     /gene="lptE"
                     /locus_tag="VLJ17_05565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0043165 - Gram-negative-bacterium-type cell
                     outer membrane assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly lipoprotein LptE"
                     /protein_id="HSV22481.1"
                     /translation="MWWLERDPVRSFVCRLACIVCLGGVTAGCFQPLYGEHSLTNSAG
                     IAPALAAVDVAQIAAPSGSSESRVAVVVRNQLLFDLTGGAAAPPPTHRLAVRMSSSRL
                     SVIVDINSGRPDVEDYGLNVNYTLTEIKSGKSVVNGTTSARVSYDIPGQAQRFARARA
                     LRDSEDRAAKLIADNIRSRLASYFVAGT"
     gene            8979..10010
                     /gene="holA"
                     /locus_tag="VLJ17_05570"
     CDS             8979..10010
                     /gene="holA"
                     /locus_tag="VLJ17_05570"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HSV22482.1"
                     /translation="MVAFKAADVERFLARPDPGKPIILVFGPDAGLVRERVDALVRSA
                     VDDPRDPFGLALVDGDALAEAPERLVEEAHTIPLFGGRRAILVKSGGRNFSVAVERLI
                     AAPPGIDCRIVIEAGDLKRGAPLRTLCERAPIVAALPCYADSNRELGRLVDEEMRRAG
                     MSIAADARALLTSLIGGDRRASRSEIEKLALYALGGNSIEVADVLAVVADATVPAVDA
                     MVDAAFAGHTNEVELNFVKVQSNGVSASTMAAAVVRQANALHRFRLAVESGSSIDEAI
                     KRTTPAIHFSREKAVRAALEAWSPKRLERLIGQLGETTLEVRKNSDLAYPIVQRALLS
                     IAVAARRKE"
BASE COUNT         2171 a         2859 c         2973 g         2107 t
ORIGIN      
        1 cggcgccagg catcaaatca tcccgtgtaa tcgggctcgc agacgatatt gcacgctcca
       61 tgagcgcact gtcggcgcgc gtcgcggtgg tttccgggcg taacgttatc ggcattgaat
      121 tgcctaaccc cacccgcgag aaggtctatc ttcgggaact cctggcagac ggcgattacg
      181 caggcagcgg cgccaagctc gcgctctgcc ttggcaagac gatcggcggc gaatccgtaa
      241 tcgtagatct cgctcgcatg ccgcatttgc tgatcgccgg caccaccggc tctggcaaat
      301 cggttgccat caacaccatg attctaagcc ttctctatcg attgcggccg gagcagtgcc
      361 ggctcatcat ggtagatccc aagatgctgg aattgtcggt ctatgacggc atcccgcacc
      421 tgcttgcgcc ggtcgttact gatcccaaga aagccgtagt tgcgctgaaa tgggcggtgc
      481 gggaaatgga ggatcgctac aaaaagatgg caaagctcgg cgtgcgcaac atcgatggct
      541 ataacgtgag gctcgcggag gcgcgctccc gaggcgaggt gctgtcgcgc acagtgcata
      601 ccggatacga tccggaaagc ggggacgcaa tctatgagaa ggaggaattc gatcaggagc
      661 cgctgcccta tctggtggtg atcgtcgacg agatggcgga cctcatgatg gtagccggaa
      721 aggacatcga aggagcaatt caacgccttg cccagatggc gcgggcagcc ggtatccacg
      781 tgatcctggc aacgcagagg ccatcggtcg acgtcattac cggcaccatc aaggctaatt
      841 ttccgacccg catttccttc caggtaacct ccaagatcga cagtcgcacg atattgggcg
      901 aacagggtgc cgagcaactg ctcgggcagg gcgacatgct ctacatggta ggaggtggac
      961 gaattagccg cattcacggc cccttcgtat ccgacgatga agttgaaaag atcgttcgcc
     1021 acctcaaatc tcagggccaa ccgcattatc tggaggcggt cacggcagaa gacgacacgg
     1081 aaggcgaaga cggcgccgta ttcgacgcga ccggaatggg cgataccgag ggtggtgatc
     1141 tctaccaaca ggctgtacaa atcgtgacca gggaccgcaa ggcttcgacc agctacatcc
     1201 agcgacgact gcagatcggc tataatcgcg ccgcaaccct cattgaacgg atggaacgag
     1261 aaggcgtggt tggccaaccg aatcatgccg gcaaacgtga aatcctggtt ggcggcgagg
     1321 ataacgaagg ctattgaaac agcacgcgcg cggtgaaacc gcgtaaacgg taatggcgca
     1381 attacatccg gacacccccg gatgtgcacg tctttttttt ataaggcttt cggaggtgaa
     1441 catgggatgg atccgtttgg cggcgttggt gagcgtcatg ctcatagcag cgcccataat
     1501 tggggttgcc caaagcgttc cgctgccaca gccagcgcca aagaatcgca accaagtcac
     1561 ccgttcgccg acaaccgatg cggccggacg cccgattccc gtacgccccg gtgaggccgt
     1621 tccctatgac gggtctcaac gtgcccttgt ggatcgtgtc agcaactatc tttcgacctt
     1681 acagacttta atcggagact tcgtgcaggt tggtccggac ggcacacgca cgaccggaaa
     1741 gttctatatc cagaagcccg gaaaagtgcg atttgaatat gagcccccca gcccgattga
     1801 cgtcattgcg gatggttcgt ctgtggtcgt gcgcgatcgc cgacttgcaa ctcaagatct
     1861 ttatccgctg tcgcagaccc cgctgcggta cctcttggcg gatcaaatcg atttggcgcg
     1921 cgacaccaat ttagttggcg tctcccaaga caacaccttc attaccgtta cgatcgagga
     1981 aaggcagctt ctcgttggaa cccaccgtct cgtgctgatg tttggggcga aggatgtgca
     2041 gttgcgccaa tggaccgtca cggacccgca aggctacgat acgactgtgg cggtctataa
     2101 tctcgacgta tctcacaagc cggatccgaa tttgttcacg atcagctacg aaaacaggtt
     2161 tcaataacgg tcgatccgcc agcgcagctt caagactgcg attgccaact tcgggtgaga
     2221 tcgagagctc gccgatacca aaacgtcatc ggcgagagca ggacttgcaa cagttgtagc
     2281 tatcgcaacc ttgcgtcgtt tgtctggaat gaaactgaag ataacgacct ggaacatcaa
     2341 ttcggtgcga ttgcgcatca atctggtgac caaattcctc aagatcgaga ggcctgatgt
     2401 aatctgcctt caggaaacca agtgcccgga cgacaaattt ccgctcaggc ggttcacccg
     2461 gctcggctac acccacgccg cgctcaacgg tcaaaaggga tatcatggcg tcgcgatcct
     2521 ctcgcggctc cctttcgagt cgatcgatgc gcgcagctat tgcggtaaat cggacagccg
     2581 ccatcttgcc gtaaagatcg gcaaccacgc cggactggcc gaacaggtca cgctgcacaa
     2641 tttttacgtt ccggccggcg gcgatgaacc aaatccgaca attaacgaga agttcgcaca
     2701 caagctcgca tttctggacg aaatgcgcgt tgcgttggac atgcgccttg gcaacaacga
     2761 tcgggcgatt ctagtcggcg acctcaatgt cgcaccgctt gaacacgatg tgtggagcca
     2821 taagcagatg ttaaaggtcg tctcccacac gccgattgaa tgcgaaaagc tcaccgccgt
     2881 gcagagagcc ggcaaatggc tcgacgtctt gcggtcgtac gtgccggagc cgaccaaact
     2941 ttatacgtgg tggagctatc gcgcacagga ttgggaagca gccgaccgcg gacgacgtct
     3001 cgatcacgtc tgggtgagcc ctgccctcgc ggctcgggtc ttaggcatga ggataactaa
     3061 gcaagcgcgt ggttggactc agccgtccga ccacgtccca gtgacggcga tcattaagct
     3121 gtagcaacaa agttgtatgc tgatgcagac aacaacagat cttatcaggg attcggtctc
     3181 tcaagtacac cgcgcacctt ggagatttcc tcgcttgcga ggttcacata ctcgacgatt
     3241 cgctcgcgca tcaggcgagc tgcttccgga aacccttcaa gaactttgcg gaacagactg
     3301 cgcgagatcc tgatcacagt cgtcggttca gccgcaattg ctgtggcagg gcacacggtt
     3361 tcggtcagga gggcaagctc accgatcaga gcgccaggcc cgaacctaac gctcggatcg
     3421 gaccgtctgg gatcgtggat ggtcagcttc aacgagcctt cctgaatgag atagccggcg
     3481 tcggttgttt ctcctgcgcg gaagagaatc tcgccgtcag caagatgttt tgtttcggaa
     3541 ccgattgcga tgatctgcag tgccgaaaaa ccgagatgcg cgaacgttgg aacgcgctgc
     3601 aaaaagtcga tgtcgtcttc gatcgtcatc ggtggttcga agggccccct atggaactaa
     3661 tttgtatccg ccggcttcgg tcactaagat ctccggcatt gctgcgtcct tttcgatctt
     3721 ctggcgtagt cgatagatgt gcgtctccag cgtgtgggtg gtcacgccgg aattgtatcc
     3781 ccaaacttcc tgcaacaaaa tctcacgcga gatggaccgc tgaccggcgc gataaaggaa
     3841 tcgcaggatc gcggtttcct tctcggtgag tcgaaccttg ttacccttgt tgctcatcaa
     3901 caacttcgaa cttggctgga acgaataagg cccgatcgtg aataccgcgt cctcgctcgc
     3961 ctcatgctgc ctgagctggg cgcgaattct tgccaacaaa accgcgaacc gaaacggctt
     4021 ggtcacatag tcgttggcgc cagattccag acccaagatg gtgtcggaat cggtgtcgtg
     4081 gccggtcaac atgatgatgg gcgccttata ggaattcttt ctcagcatgc gcaccgcttc
     4141 ccggccgtca atgtcgggaa gtccaacgtc cataatgata agatcaattt gcccgccctt
     4201 ggcggcttgt acgcccttgg tgccggtatc gactgagatg gcctcaaatt cctcgtgcag
     4261 cgacaattgc tccaccaacg cttcgcgcag ctcggcatcg tcgtctacga tcaaaattct
     4321 gcgcgccgtc gtcataaaga gcctcggggg tctatattgg atgccacatt ttcggcagat
     4381 agagcaatcg aggacgaaag cgcaagccac gtcgcagcgt tatggcgatg acggcatttc
     4441 catcctatca acgtcatatg cgtcggacaa tgctcgcaaa tgtgaacgtc cgcacaaggc
     4501 ccggcaaccg caggcaggga tggttgttgg ccgggcactg gcgtatcaaa gtggcgcttg
     4561 gccgctcggg catcaaggcc aacaagcggg agggggatgg ggcaactccg gccggacgct
     4621 atcgactggt acggttatgg tggcgccggg atcgctggtc acgaccccag accctgctgc
     4681 ctgttaggcc gatcggtgtt gcggacggat ggtgcgaggc cccttccgac cgacgctata
     4741 atcgggccat cagaatttta cctggtcaac ccgcagaccg attgtggcgg tcagacgatt
     4801 tgtacgactt ggtcatcgag atggaccaca atacgcggcc gcgcatctcg ggccgcggta
     4861 gcgcggtttt cattcatgta gccagagccg agctggcacc cacggccggc tgtatcgccc
     4921 tgccgattgc gatcctgaag accttcgttt cccacttagg accaaaaacg agaataacaa
     4981 ttcagtacta ggcgctgaca cggtgcccga aaatggccgt ccccacgcga acatgggtgg
     5041 cgccaaatcg gatggcaacc gtaaaatcgg cgctcatgcc catagacagc agagtcaaac
     5101 cgttgcgtgc ggcaattttg gccgtcaggg caaaatgagg cgctggcgct tcgtcgaccg
     5161 gcgggatgca catcaaaccg caaatcttga gatcgtagag cgcatggcaa agagctatga
     5221 acgcgtcggc atcctccggc aacactcccg ctttctgagg ctcggcccca gtattgacct
     5281 gcacgaacat caacggggtg cgaccttttt tttggatcgc cttagccatt gcggcacaca
     5341 ggcttggccg gtccacggaa tggacggcgt caaataacgc aacggcgtcc tgggccttgt
     5401 tggattgcag cggtccaatg agatgtaact tcaggtccgc ataccgctcg cgcaataccg
     5461 gccatttggc gttggcttcc tgaacccgat tctccccgaa gacgcgctgt ccagctgcga
     5521 tcacgggctc gatcgcatcc gcaccataag ccttggaaac cgccaacaag gtcacgctgt
     5581 cggaaagccg cccagccgcc tggcaggcta agtcgatttc acggcgcaca gcgttgaggg
     5641 aggtcactgg gtcgtggtgc ggtgcgatca tggcgaaacc tggttgttcc gagggtggat
     5701 tcttatcgaa ctcggacgtt attgacctat tcgccgcaat catgtcctag tccggtggtg
     5761 cttcgacggc cggattatca tgagcatcga gcgatacaac gcccgcgcgg cggaatctcg
     5821 ttggcagcag gtatgggaca cgcagaacgt gtttgccacc cgcaacgagg acccgcgccc
     5881 gaaatattat gtgctggaga tgttcccgta tccgtccggg cgcatccaca tgggccatgt
     5941 ccgcaattat gccatggggg atgtggtcgc ccgttacaaa cgcgcccgcg gattcaatgt
     6001 gttacatccg atgggatggg atgcgttcgg gatgccggcc gaaaatgccg ccatggccaa
     6061 tcgcgtgcat ccgcgaactt ggacctacga aaacattgcc gccatgaagg cgcagctcaa
     6121 atccatgggc ttgtcgctcg actggaaccg cgaaatcgcg acttgcgatc caagctatta
     6181 caagcatcag cagaggctgt tcctcgactt tctggccgcc ggactggtcg agcgcaagca
     6241 ttcgagggtg aactgggatc cagtcgatca gacggtacta gccaacgagc aggtgatcga
     6301 cggtcgcggc tggcgctctg gcgcgctgat cgaacagcgc gaactcttcc agtggttttt
     6361 gaagatcacg aactactcgc aagacctgct tggcgcgctc gaccagctcg accgctggcc
     6421 agaaaaagtg cggctgatgc agaagaactg gatcggtcgc tcagaagggc tcttgattcg
     6481 tttcgcgctc gatccagaaa cactacctag cgttgagagc gaactggaag tcttcacaac
     6541 gcgaccggac actttgtttg gcgcgaaatt tatggcagtc gcgccggatc atgtacttgc
     6601 gcttgcggcc gcgacgaaaa atgaaaaggt ggccgaattc atcgccgagt gtatgcgccg
     6661 gggcaccgcg caggaactga tcgagaccgc tgaaaagaaa ggcattgata ccggtattcg
     6721 tgcaattcat ccatttgatc cgaactggcg gttgccagtc tatgtggcga atttcatttt
     6781 gatggagtac ggcacgggcg ccatctttgg ctgcccggcg catgatcagc gcgacctcga
     6841 tttcgtaaac aaatacggac tcggcaacac gccggtggtc tgcccgccgg gtcaagatcc
     6901 gaaaagcttc gtcatcaccg acatcgccta tgatggcgat ggccgcatga tcaactcacg
     6961 gtttctggac ggcatgacaa tcgcagaagc caaggaggaa gttacgcggc gattggagaa
     7021 agaaagcagg ggcaaccgtc ccgtagccca gcgtcaggtc aattttcgcc tgcgtgattg
     7081 gggtatttcg cggcagcgtt attggggctg tccaatccca atcattcatt gcaacaactg
     7141 cggcattgtt ccggtacccg aaaaggacct gccggtaacg ctcccagagg acgtcacgtt
     7201 cgaccagccg ggcaatccgc tcgaccacca tccgacctgg aagcacatcc actgcccgca
     7261 atgcggctcg cccgcccagc gcgaaaccga tactatggac acgttcgtcg actcctcgtg
     7321 gtattttgct cggttcaccg atccttggat tgaatcgcga ccgaccgacc gcaaagcggt
     7381 cgatgcgtgg ttgccggttg accaatatat cggtggcatt gagcacgcga ttcttcatct
     7441 gctttacagc cgttttttcg ctcgcgccat gcatgcgacc ggtcatgctc gaattgatga
     7501 gccgttcgca ggcctgttca cccaaggcat ggttgttcac gagacctatc gcagtaacgc
     7561 gggttgggtt gcgcctgcag aagtcaaagt tgaggtagca ggcgatgtcc gtcgggcgac
     7621 gctgctgcaa accggcgaga cggttgagat cggccctatc gagaagatgt cgaaatcgaa
     7681 gcgcaatacc gtggatccgg acgatatcat cggcacgttc ggggccgata cggcgcggtg
     7741 gtttatgctc tctgattcac cgccggaacg tgatgtgatc tggaccgagg agggcgtcca
     7801 aggcgcttgg cggtttgtgc aaaaactttg gcggctgatc aatgaggcca cggaatttgt
     7861 ccgcggtaca gcgacgacac gaccgcccgt tttctcggac gtcgctattt cggttcgcaa
     7921 ggctgctcat ggggcgttgg cgaaggtttc ggaagatctt gaaaaattgc ggttcaaccg
     7981 ctgtatcgcc cacatctacg agtttgcaaa ttccctccag gccgtcctgg ccacttcctc
     8041 tcggggtgag cgtgatatcg ggtttgcggt acgcgaggcc gccgagatca tggtgcagct
     8101 gtttcaccca atgatgccgc atttggccga ggaatgctgg gcggcgctgg gccatacaac
     8161 cctgcttgcc aaccagagct ggccagcggt tgaaaacgac ctcctcgttg aggatacgat
     8221 cacgcttccg gtacaggtga acggcaaaaa gcgcgcggac gtaaccattg cgcgcgacgc
     8281 ccgaaacgtc gatattgagg cctccgtcct cgccctcgac gctatcaagc gggccctggg
     8341 cggcaaggcg ccgaggaaag ttatcattgt tccacaaagg atcgtcaatg tggtggcttg
     8401 aacgagatcc agtgcgttcc ttcgtctgcc gtctggcttg cattgtatgc cttggggggg
     8461 taacggctgg ttgtttccag cccctttatg gcgaacactc actgaccaat tcggcaggca
     8521 tcgcccccgc gttggccgcg gtggacgttg ctcaaatagc tgcgcccagc ggatcttcgg
     8581 aatcgcgggt cgccgttgtg gtccgaaacc aattgctgtt cgacctcact ggcggagcgg
     8641 cggctcctcc tccgacgcat cgtcttgcgg tcagaatgtc atcaagccgc ctttcggtca
     8701 ttgtggacat taacagcggc aggccagacg tcgaggatta tggtctcaac gtcaattaca
     8761 ctttgactga aatcaagagc ggcaagtcag tcgtaaacgg cacgacttct gcgcgcgtgt
     8821 cctatgacat tcctggtcaa gctcaacggt ttgcccgggc gcgtgcgctg cgcgactcgg
     8881 aagatcgcgc cgctaagttg atagctgaca atatcagatc acgcctcgca tcgtacttcg
     8941 tagccggaac ctgagcgcga cggcgaaatt tcaccgccat ggttgcattc aaggctgccg
     9001 acgtcgagcg gtttttggcg cggcccgatc ccggcaaacc tatcatcttg gtgtttgggc
     9061 cggacgcagg cttggtgcga gaacgagtgg atgcgcttgt tcgctccgcc gtcgacgatc
     9121 cgcgtgatcc tttcgggctt gctcttgtgg acggcgatgc gctcgccgaa gctcccgaac
     9181 ggctggtgga ggaggctcac accataccat tgtttggtgg ccgacgtgcg attctggtca
     9241 agtccggcgg gcggaacttc tccgtcgcgg tggaacgcct gatcgcggcg ccgcccggga
     9301 tcgattgccg gattgtcatc gaggccggcg atttgaaacg aggtgcaccg ttgcgcacct
     9361 tgtgtgagcg cgcgccgatc gtggctgcgc tgccgtgcta tgcggattcc aatcgcgagc
     9421 tcggtcgtct ggtagatgaa gagatgcggc gcgccgggat gtcgattgcg gcggatgctc
     9481 gcgcactgtt gacatcgctc attggcggcg atcgtcgtgc gtcgcgttcg gagattgaaa
     9541 aactcgcgct ttatgccctt ggcggaaaca gcatcgaggt ggcggatgtg ctggccgtgg
     9601 tggcggatgc aactgttccg gcggttgacg ccatggttga tgcggcgttc gccggccata
     9661 cgaacgaggt cgagttgaat ttcgtgaagg tccaatcaaa cggcgtttct gcaagcacga
     9721 tggccgccgc ggtcgttcgt caggcgaacg cactccaccg gttccggctc gccgtagaat
     9781 ccggcagttc aatcgatgag gcgatcaagc gtaccacgcc ggcaatccac ttcagtcgcg
     9841 agaaagccgt gagggcagcg ctcgaggcgt ggagtcctaa gcggcttgag cggttgattg
     9901 gacaactcgg tgaaacgaca ctcgaggtcc gcaagaattc agacttggcc tatccgatcg
     9961 tgcaacgagc attactgtcg atcgcggtgg ccgcacggcg caaagaatga agagcgggaa
    10021 gctgcgcgac ctatcgctat ggggttttca ccaagcgtcg cacgatatca cggagctgat
    10081 caagactacg gtacttgatg tgaaccgctc
//
LOCUS       DATILV010000239         2659 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4401375, whole genome shotgun sequence.
ACCESSION   DATILV010000239 DATILV010000000
VERSION     DATILV010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2659)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2659)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2659
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4401375"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..890)
                     /locus_tag="VLJ17_05575"
     CDS             complement(<1..890)
                     /locus_tag="VLJ17_05575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV22483.1"
                     /translation="MSTQVSNADVRRVVIASLMGATIEWYDFFLYGAVAGIVFNKFFF
                     PTSDPVVSILLAYTTFAIGFVARPLGGLVFGHFGDKIGRKSVLVATLMIMGVATVLIG
                     CLPTYQQIGIAAPIMLVVLRLLQGIGLGGEWGGAVLMAYEYAPPHRRGLFASLPQIGL
                     AIGLCLSSGVVALLSRLPDADFLAWGWRVAFILSFILVVVGLYIRLRIIETPDFQRVK
                     ETNTEVKIPAVAMLREYPGSIILGMGARYIDGVFFNVFAVFSIAYLTQLAPLKVSRET
                     ALWAVSSAALMMIISIPFFG"
     gene            complement(1064..>2659)
                     /locus_tag="VLJ17_05580"
     CDS             complement(1064..>2659)
                     /locus_tag="VLJ17_05580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HSV22484.1"
                     /translation="VIGAGSAGCVVANRLSADPKLQVALLEAGPPDRSFWIHLPIGYG
                     KTMWDPKVNWRFYTEPEPNMAGRKIYWPRGRTLGGSSSINGLIAIRGQAEDYDQWQAL
                     GNGGWSFREVLPYFVKSETNDVAGEGQLHGSSGPVTVTSIKHRHELIDAAIESAEKLG
                     VPRTKDFNGARQEGVGYYQLTTRNGMRMSAAKAYLKPARKRPNLSIITNAHATGLIME
                     SRRAAGVRYVVQGQERTVLARRGVVLSAGALQSPQLLMLSGIGAAAELKEHGIPVVVD
                     RHAVGKNLQDHLQIRLIYRCKRPITTNDQLNSVFGRVRIALEWTLARSGPLAVGINQG
                     GLFTRVLPESKTPDIQFHIATLSADMAGSKPHPFSGCTLSVCQLRPESRGEVKLGSRD
                     PLAPPKMFANYLDSETDRRCVTAGIAFARKLAQTSPLADEMAEEVHPGPKASTDADLL
                     QFAREQGATIFHPSGTCRMGNDDDAVVDPRLRVRGVDALWVADCSIMPTLVSGNTNLP
                     AIMIGEKAADMILEDVREAKYRR"
BASE COUNT          557 a          799 c          779 g          524 t
ORIGIN      
        1 caaccgaaga atgggatcga gatgatcatc atgagcgcag ctgacgacac cgcccagagt
       61 gcggtttcgc gcgagacctt cagtggcgca agttgtgtca gataagcgat cgaaaagact
      121 gcgaaaacat tgaagaatac gccgtcgatg tagcgcgcgc ccatgccgag gatgatactg
      181 ccggggtact cgcgaagcat cgcaacagcc gggatcttca cttcggtatt cgtctctttc
      241 acccgctgga aatccggcgt ctcgatgatc cgtaagcgga tgtaaaggcc gactacaacc
      301 aggatgaatg aaaggatgaa agcgacgcgc cagccccagg ctaggaaatc ggcatcagga
      361 aggcgcgaca ggagcgcaac tacaccagag gacaagcaga ggccgatcgc caaaccgatc
      421 tgcggcaggc tcgcaaacaa gccgcgcctg tgcggaggtg catactcata cgccatcaac
      481 acagcaccgc cccattcgcc gccgaggcca atgccctgca agaggcgaag taccaccagc
      541 atgatgggcg cggcaatgcc gatctgctga taagttggaa ggcacccgat cagaaccgtg
      601 gcgactccca tgatcatcaa tgtcgcgacc agaacgctct ttcggccgat cttgtcgccg
      661 aagtgaccaa agaccagtcc gccgagcggg cgagccacga aaccaatggc gaaggtcgtg
      721 tacgccagaa ggatcgacac gaccggatcg gatgtcggaa agaagaactt attgaagaca
      781 atgcctgcca cggcaccata cagaaagaaa tcgtaccact cgatggtggc ccccatcaga
      841 ctagcgatca cgacgcgcct gacatctgca ttcgagactt gtgtcgacat gtggcttcct
      901 ccgattagcc aagttgatac aatcgtgccg attgagattg ccggccaacg ctgccccgaa
      961 gcgccgcagt tgcgagatct ctcggcattc tctttgcttt cagacttgtt cggcagtcct
     1021 ggcggctttc cgctctttga tttcccgtac ctacacgttc cgcctagcgt cgatacttcg
     1081 cctcgcgcac atcttccagg atcatgtcag ccgctttctc gccgatcatg atggcaggca
     1141 gattcgtgtt gcccgagacg agcgtcggca tgatcgagca atccgccacc cacagggcgt
     1201 cgacgccgcg aactcgtaat cgcgggtcga cgacggcgtc gtcgtcattg cccattcggc
     1261 aggtgccact cggatgaaag atcgtagctc cttgctcgcg cgcgaattgc agcagatccg
     1321 cgtcggtgct tgccttaggt cctggatgaa cctcttccgc catctcgtca gcaagaggcg
     1381 acgtctgcgc aagcttcctg gcaaacgcga taccggctgt gacacagcga cggtcggtct
     1441 cgctgtcgag atagtttgca aacatctttg gtggcgcgag gggatcgcgt gagccgagct
     1501 ttacttcgcc ccggctttca gggcggagct ggcacacgga cagcgtgcaa ccggagaacg
     1561 gatgcggttt gctgccggcc atatcagcgc tgagcgtggc gatgtgaaac tgaatgtcgg
     1621 gcgttttgga ctctggtagc acccgcgtga acaagccgcc ctggttgata ccgacggcga
     1681 ggggccccga gcgcgccagt gtccactcga gcgcgatgcg cacgcggccg aataccgagt
     1741 tcaactggtc gttggtagtg atcgggcgct tgcaacgata gatcaagcgg atctggaggt
     1801 gatcctgcaa attcttgccg accgcgtgtc gatcaaccac gactggaatg ccgtgctctt
     1861 tgagttctgc cgctgctcca atgcccgaca acatgagcag ttgcggcgac tgcagcgcgc
     1921 cggctgaaag gacgacgcca cgccgtgcta ggacagtcct ctcttgacct tgcacgacgt
     1981 agcgtacgcc cgctgcgcga cggctctcca tgatgaggcc cgttgcatgg gcattggtga
     2041 taatgcttag atttggtcgt tttctcgccg gtttgagata ggctttcgcg gcactcatgc
     2101 gcatgccgtt acgggtcgtc agctgataat agccgacacc ctcctgtcgc gcgccattga
     2161 agtccttggt gcggggaacg ccgagctttt cggcactttc gatagccgcg tcgataagtt
     2221 cgtgacgatg cttgatgctg gtcacggtca ccggccccga ggagccatgc agctgtccct
     2281 cgcctgcgac gtcgttcgtt tccgatttga cgaagtaggg cagcacttcg cggaacgacc
     2341 atcctccgtt gccgagcgcc tgccactgat cgtagtcctc ggcctgcccg cgaatcgcga
     2401 tcaaaccatt gatcgagctt gatccgccaa gcgtgcgtcc gcgcggccag tagatcttcc
     2461 ggccggccat gttgggctcg ggctcggtgt agaaccgcca attcactttc gggtcccaca
     2521 tcgtcttgcc atagccaatc ggcaggtgga tccaaaagct tcgatctggc ggacctgctt
     2581 ccagcagggc gacctgcagc ttgggatcgg cagacaggcg gttggcgacc acgcagcctg
     2641 cagagccagc gccaatcac
//
LOCUS       DATILV010000240         4665 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2868293, whole genome shotgun sequence.
ACCESSION   DATILV010000240 DATILV010000000
VERSION     DATILV010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4665
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2868293"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(608..1276)
                     /locus_tag="VLJ17_05585"
     CDS             complement(608..1276)
                     /locus_tag="VLJ17_05585"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006204193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSV22485.1"
                     /translation="MATTSAADLMNRTYRYQRHIYNFTRKYYLLGRDRLIAEIDAGDG
                     VRVLEIGCGTGRNLILAARRYPGARCFGIDLSTEMLNSAIRAIVRAGLAARISVAHGD
                     ATRFDPQSLFGIAQFDRIFFSYSLSMIPRWHDALDMAIALLAPNGELRVIDFGGQERL
                     PGAFRRLLRRWLVAFHVVPRDKLEAILTARATATRATIAFERPYRGYAQYATLRREPI
                     RKSV"
     gene            complement(1278..2429)
                     /locus_tag="VLJ17_05590"
     CDS             complement(1278..2429)
                     /locus_tag="VLJ17_05590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007875830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3419 family protein"
                     /protein_id="HSV22486.1"
                     /translation="MREFLFTLAFKGLVYPQIWEDPEVDMEALAITPDCHVVAIASGG
                     CNILSYLVADPGRITAVDLAPAHVALNRLKLAAVRQLPTWQSFYRFFGEADTEANITA
                     YWRFLKPNLDVETRDYWEGRSLLGRRRISMFSRNVYRCGLLGYSIGLGHLVARLHGVD
                     LSKMLRARSLAEQRAFFETSLAPLFDKPLVRWATGRQMSLYGLGIPPAQYAALGAGAP
                     HIAMVLRDRVKRLSCDFSLQDNYFAWQAFGRSYSDSATGPLPPYLKQAHFETIRARAD
                     RVEVLNRSFTEYLKSRPDRSIDRYVLLDAQDWMSDPQLNELWREITRTARPGARVIFR
                     TAAAPSLLHGRVDGFVLRQWRYESEQSRDLTRRDRSAIYGGFHLYVLAA"
     gene            2705..4282
                     /locus_tag="VLJ17_05595"
     CDS             2705..4282
                     /locus_tag="VLJ17_05595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008136750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase D family protein"
                     /protein_id="HSV22487.1"
                     /translation="MGIRQPITRRRLLKMSTLAGIAATGGIARPLVSRAADRPSISHG
                     VQSGDVSLDSAVVWARADRPSRALIDWSTTESFKNSHRAAFVDVLPETDLTANVLIEG
                     LPAGQDIFYRIQLQDHSSPTVVGEPITGRFRTAPADRRSISFAWSGDTAGQGWGIDES
                     RGGMRLYGTMLRNRPDFFIHSGDNIYADGPIPAELKLPNGEVWKNLVTEEKSKPAETL
                     AEFRGAYKYNLTDRNILAFNRAIPIFSQWDDHEVTNNWWPGEPLDRAEHLRKKYSDKN
                     ALALAARASRAFHEYMPMRVTQSESGRVYRKISYGPLLDVFMLDMRSYRGPNGEGKEE
                     TYGPASHFLGPTQVAWFKRELLNSRATWKVIAADMPIGLIVVYDVDRNWGVEAIAQGD
                     GPARGRELEIADILSFIKRANIRNTLWVTADVHYTAAHYYDPNKAVVQDFEPFWEFVS
                     GPIHAGSFPQNKLDNTFGPQLVYVKAPETANRPPSEGLQFFGHVAIDGATQVMTVTLK
                     DVDDRALWSKTLEPKLG"
     gene            complement(4310..>4665)
                     /locus_tag="VLJ17_05600"
     CDS             complement(4310..>4665)
                     /locus_tag="VLJ17_05600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018044240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4070 domain-containing protein"
                     /protein_id="HSV22488.1"
                     /translation="SRFHHQVDSTYVNRMIPPARGKLNWANLSAGLVLAFRVIWHIGI
                     LSDYRKPFWRAARHAMRRGQIDAVLGMGFIAHHLIQFTREALRGEQNASYYSTKKRTA
                     EPAPAADLAAVREPA"
BASE COUNT          932 a         1410 c         1459 g          864 t
ORIGIN      
        1 gatttgccgc gctgggcttc gacgtgtggc tgcgttcccc agcaccttgt cccttgtggt
       61 tgtccgcggc gccgcacggt ggacacagaa taagagttgt gccccgcggg caaatatctt
      121 atacggtcca ggcgcctgtg aagggcgcgc gtgatttggg atggaaaggc cgggtccaaa
      181 cacatccgat taagtagcgg ccttacaatg gcgatggggg aattcatgta tggctcgcgc
      241 gcgtacttcg tagcgacggt agctgcaatt tccgtggtga tgattacttc gcaaggctgg
      301 gccgccaaag ctggtggtgg tcgggatgcc gctgtatcga aatgtatagc tcaggtgcaa
      361 gcccaattcg ggggaccggc aaactcacct gatagcaacc agcagcaacg gctcgctcta
      421 tacaagtcat gtatgaccag cgcgggatac cggccataac cggagccgct cactgcattg
      481 gtgggatccg ctgaggcggg cgaaaatcct cgcccgacgc actaaggtat gggtgaggcc
      541 gcccttgaac gggcggcttc gtgttccagc aaggtgcata ctcagaaaca attgtttatg
      601 catggcgcta aaccgacttg cgaatcggct ctcggcgcaa cgtcgcatat tgcgcatatc
      661 cgcgatacgg ccgctcgaag gcaatcgtag cccgggtcgc cgttgcgcgc gccgtcaaga
      721 tcgcttcgag cttgtcgcgc ggcacgacat ggaacgccac gagccaacgc cgtaacagcc
      781 gccggaacgc gccggggagg cgttcctggc cgccaaaatc gatgacccgc aattctccat
      841 tcggcgccag cagcgcgatg gccatgtcga gcgcgtcgtg ccatcgcgga atcatggata
      901 ggctatagga gaagaaaatg cggtcgaact gtgcgatccc gaacagcgat tgcggatcga
      961 accgcgttgc atccccgtgc gcaacgctga tccgcgccgc caggcccgcg cgtacaatcg
     1021 cgcggatcgc ggaattgagc atctcggtcg acaggtcgat gccgaaacaa cgcgcgccgg
     1081 gatatctccg cgccgccagg atgagattgc gcccagtgcc gcagccgatc tccagcacgc
     1141 gaacgccgtc gccggcgtcg atctcggcga tcaaccgatc gcggcccagc agatagtatt
     1201 tgcgggtgaa attgtagatg tggcgctgat accggtaggt ccggttcatc agatctgctg
     1261 cggacgtagt cgccacgtca ggcggccagc acgtagagat ggaatccgcc atagatggcg
     1321 gagcggtcgc gccgcgtgag atcgcgcgac tgctcggatt cgtagcgcca ttgtctcaat
     1381 acgaacccgt cgacccggcc gtgcaatagg ctaggcgctg cggcggtgcg gaagatcacg
     1441 cgcgcgcccg gccgggccgt gcgggtgatc tcgcgccaca gttcgtttaa ttgcgggtcc
     1501 gacatccagt cctgggcatc gagcagcacg tagcggtcga tcgatcggtc cggccggctc
     1561 ttgaggtatt cggtgaatga acggttgagc acttcgaccc gatcggcacg tgcacggatg
     1621 gtttcaaaat gcgcctgctt taaataaggc ggtagtgggc cggttgcgct gtccgaatag
     1681 gagcggccga atgcctgcca ggcgaaataa ttgtcttgga ggctgaagtc gcaggacaac
     1741 cgtttgaccc tgtcgcgcag taccattgct atgtgcggcg cgccggcgcc tagagcagca
     1801 tattgggcgg gcggaatccc gaggccataa agcgacatct gccgtcccgt cgcccaccgc
     1861 accagcggct tgtcgaacaa cggcgccaac gacgtttcga aaaacgcccg ttgctccgca
     1921 agactgcggg ctcgcagcat cttgctcaga tcgacgccgt ggaggcgtgc caccagatgg
     1981 ccgaggccga tggaataacc caagaggccg cagcgataga cgttgcggga aaacatcgag
     2041 atgcgacggc gacccaacag gctgcgcccc tcccaatagt cgcgcgtttc gacatcgagg
     2101 ttcggcttga ggaaccgcca gtaggccgtg atatttgcct ccgtgtcggc ttcgccgaag
     2161 aagcggtaga aggattgcca cgttggcagc tgacggactg cagcaagctt gaggcgattg
     2221 agggccacat gggcaggggc gaggtcgacc gcagtgattc ggcccgggtc ggcaaccaag
     2281 tacgacaata tgttacagcc acccgatgcg atcgctacca cgtggcagtc cggcgtgatc
     2341 gccagcgcct ccatgtcgac ctcggggtct tcccatattt gcgggtagac gagccccttg
     2401 aatgccaagg tgaagagaaa ttcccgcaac cctgccgtcg aaaacgctcg gtttcgtcgg
     2461 accgcctgat ttaggcggcg gcttgccgca actttcctac ccgacgccaa tatcggctcc
     2521 cacgcggtca atgtcgactc aaggggggat taagcaccca gggaaatgta agtttgatga
     2581 cggcagggta gggctgtgat ggctgcgcac ttgggcacgc cctgtcatca gggattcacg
     2641 aacttgatgt cggctaacag cgggaaaatt cacgtgcttg ttcaccttct gcttggagga
     2701 cgtcatgggc atccgccaac caatcacgcg ccgtcgactg ctgaagatgt cgaccttagc
     2761 tgggattgcc gccacgggcg gcattgctcg gccgctggtg agccgagccg ccgatcggcc
     2821 gtcgatcagt cacggggtgc aatcgggcga cgtatcgctc gactctgccg tcgtgtgggc
     2881 acgcgccgac cgaccgtctc gggccttgat cgattggtcg acgacagaga gcttcaagaa
     2941 cagccatcgc gcggcattcg tggacgtgct gcccgagacc gatttgactg ccaatgtcct
     3001 catcgaggga cttccggctg gccaggacat cttctatcgc atccagctcc aggaccactc
     3061 atcgcccacc gttgtgggcg aaccgatcac cggccggttt cgcaccgcgc cggccgatcg
     3121 gcggtcgatt tcgttcgcgt ggtcgggtga taccgctggc caaggctggg gcatcgacga
     3181 gagccgtggc ggcatgcgcc tttacggcac catgctgcgt aatcggccgg acttcttcat
     3241 ccactcgggc gataacattt atgcggacgg cccgatcccg gcagaactga aattgccaaa
     3301 cggcgaggtc tggaagaacc tcgtcaccga ggaaaaatcg aaaccggccg agaccctggc
     3361 cgaattccgc ggtgcctaca aatataatct cactgaccgc aacatactcg ccttcaatcg
     3421 cgcaatcccg atcttctccc aatgggacga tcacgaggtc acaaataact ggtggcccgg
     3481 cgagccgctc gaccgtgccg agcatttgcg caagaaatat tcggataaga atgcgcttgc
     3541 gctcgccgcg cgggcgagcc gcgcctttca cgaatatatg ccaatgcgcg ttacccagtc
     3601 ggaaagcggc cgggtgtacc ggaagatttc gtacggtcca ttgctcgacg tgttcatgct
     3661 cgacatgcgc agctatcgcg gccccaacgg cgagggtaaa gaagaaacct acgggcctgc
     3721 ctcccatttc ctcgggccga cccaagtcgc ctggttcaaa cgcgagttgc tgaattcacg
     3781 tgcaacctgg aaggtgatcg cggccgacat gccgatcggg ctcatcgtgg tctacgacgt
     3841 ggaccgcaat tggggcgtcg aggcgatcgc ccagggcgac ggtcctgcac gcgggcgcga
     3901 gcttgagatc gccgacatcc tgtctttcat caagcgcgcc aatatccgca acaccctctg
     3961 ggtgaccgcc gatgtgcact atacggccgc ccattactat gaccccaaca aggccgtggt
     4021 ccaggatttt gagccgttct gggaattcgt gtcgggtcca atccacgccg gcagcttccc
     4081 gcagaataag ctcgacaaca cgttcgggcc gcagctcgtc tacgtgaagg cgccggaaac
     4141 ggcgaaccgg ccgccgagcg agggcttgca gttcttcggc catgtcgcga tcgacggcgc
     4201 gacgcaagtc atgaccgtga cgctcaagga cgtcgacgac cgcgcgctat ggtcgaagac
     4261 gctcgagccg aagttggggt gacggtcggc gaagctgggc tacgctcggt tacgccggct
     4321 cgcgtaccgc cgccaagtct gctgcgggtg cgggctcggc cgtgcgcttt ttggtcgaat
     4381 aatacgacgc gttctgctcg ccgcgcagcg cctcgcgcgt gaactggatg agatggtgcg
     4441 cgatgaagcc catcccgagc accgcgtcga tctgcccgcg gcgcatcgca tggcgcgccg
     4501 cccgccagaa cggtttgcgg tagtcggaca gaattccgat atgccatatg acccggaacg
     4561 ccagcaccag tccggctgac agatttgccc aattgagctt gccgcgcgcc ggcgggatca
     4621 tccggttcac ataggtcgaa tcgacctggt gatggaagcg cgaga
//
LOCUS       DATILV010000241         2032 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4658045, whole genome shotgun sequence.
ACCESSION   DATILV010000241 DATILV010000000
VERSION     DATILV010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2032
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4658045"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            148..1932
                     /locus_tag="VLJ17_05605"
     CDS             148..1932
                     /locus_tag="VLJ17_05605"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HSV22489.1"
                     /translation="MRVSLRALLSVIIVVSIAIAGLLYAYWNKAVPFAAMAINYVRYL
                     SAPAGTLETEVAKTGAVPTLPSTVSASPQAASGETDEDWPSYNKTLTSNRFSQLSQIN
                     RANADKLKVLCTYDTGQYTGFNSGLLKVNGALIFVTVYDIFSIDPSTCRENWRTHEDY
                     TPATPQDVNRGAAYLNGTLFRGTQDGRVLAYDVKTGKRIWETAIADPRKGESAPAAPI
                     AWNGLVFIGNAGGDIKGVKGRMYALDAKTGKIVWEFYLVPKAEGDPTRGPLGASPLNA
                     STWGNSLQGVPITGGATWTSYTLDPDTGLLYVPGGNPAPDFAADVREGSNLYSGSVVV
                     LDAMTGAYKNHFKIVPKDWHDWDVSSAPAIIKTAGGKKVLSVAPKDGHLYGFDLDTNA
                     LLYRQPVTRMENEDAPFVVGKPVHFCPGSVGGAEWNGPAYDPQLNLVFIGEVEWCTTV
                     TLMPAEKIAAVAPGEPWSGEASINPFNTWGKADPVFDWAGWIYAVDADTGAWRWRAKT
                     NYPIQSGMTPTSGGIVFFGDMGGNFYVLDTTNGRKLWSQNLRGAIGGGVITYSVNGTQ
                     KVAVAKGLTEILWPTEITTAKVSILGLE"
BASE COUNT          432 a          595 c          600 g          405 t
ORIGIN      
        1 cgatgcccat gaatatgccg cgctgaccgc gctcggcacg aaacgagaca cgtttttgga
       61 atacatccac tgcgggaatt catccgcgtg ctggcctcca ccggggggtc tgctcgctcc
      121 tgaattagca attcacggag ttaaccgatg agagtttcgc ttcgcgctct cctcagcgta
      181 atcattgtcg ttagtattgc gatagccggt ctgctctatg cttattggaa caaagcggtt
      241 ccgttcgcgg cgatggcgat aaactatgtg cgctatttgt cggctcccgc cgggaccctt
      301 gaaacggaag tcgccaagac cggtgcagtg ccgacgttac cctcgacggt ttcggcatcg
      361 ccgcaggctg cttctggcga aaccgatgaa gactggccaa gctacaacaa gacgctcacc
      421 tcgaaccgct tctcgcagtt aagtcagatc aatagagcaa acgctgacaa gctcaaagtt
      481 ctctgcactt atgatactgg gcaatatacc gggttcaatt ccgggctatt gaaggtgaat
      541 ggcgcgctga tcttcgtgac cgtgtacgac attttctcga tcgatccttc gacatgccgc
      601 gagaactggc gcacgcatga ggattacact ccggccacac cgcaggacgt caatcgtggc
      661 gcggcgtatc tgaacggcac gcttttccgc ggaacccaag atggccgggt cctcgcctac
      721 gatgtcaaga cgggcaagcg catctgggaa accgcgatcg cggacccgcg caagggcgag
      781 agcgccccgg ccgctccgat cgcctggaac ggcttggttt tcatcggcaa cgcaggaggc
      841 gacatcaagg gggtgaaggg gcgcatgtat gcgctcgacg ccaagaccgg caagatcgtg
      901 tgggagttct acctcgtgcc gaaggctgag ggcgatccga cgcgcgggcc gctaggcgca
      961 tcgcccctca atgcgtcgac ttggggcaac tcgctgcaag gcgtgccgat aaccggtggc
     1021 gcgacctgga cttcatacac cttggaccca gataccggct tgttgtatgt accgggcggt
     1081 aaccccgcgc ccgattttgc agccgacgtg cgtgaaggat cgaacctata ttccggctcg
     1141 gtcgtcgtcc tcgacgcgat gactggcgct tacaagaacc acttcaagat cgtgccgaaa
     1201 gactggcacg attgggacgt ttccagcgct ccagccatta tcaagaccgc gggtggcaag
     1261 aaggttctat cggtcgcccc gaaggacggc cacctttatg gcttcgatct cgataccaat
     1321 gccttgctct acaggcagcc ggtcacccgg atggagaacg aggacgcgcc gtttgtggtc
     1381 ggcaagcccg tccacttctg ccccggctcg gttggcggcg ccgagtggaa cggtcccgct
     1441 tacgatcccc aattgaacct cgttttcatc ggcgaggtcg aatggtgcac caccgttacg
     1501 cttatgccgg ccgagaaaat cgccgccgtc gcgcccggcg aaccatggtc cggcgaagca
     1561 tcgatcaacc cgttcaacac gtggggtaag gcggacccgg ttttcgactg ggcgggttgg
     1621 atatatgccg tcgacgccga cactggcgcc tggagatgga gagcaaagac gaattatccc
     1681 attcaaagtg gcatgacacc gacatcgggc ggcatcgttt tcttcggtga catgggcgga
     1741 aatttctacg tgcttgacac aacaaacggg cgcaaattgt ggagccaaaa cctccgcggc
     1801 gcgattggcg gcggcgtcat tacctattca gtcaatggga cacaaaaggt cgctgttgca
     1861 aaaggtctca cagaaattct gtggccaacc gaaatcacaa ccgccaaggt atcaatactt
     1921 ggattggagt aacgcgggct tcgacacatc cggaagcact ggggtccgat cacccggcgg
     1981 gcggccgagg tccgccctga atgcgacgcg atgttgcgcg aggtccaggc tt
//
LOCUS       DATILV010000242         1623 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_312971, whole genome shotgun sequence.
ACCESSION   DATILV010000242 DATILV010000000
VERSION     DATILV010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1623
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_312971"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1206)
                     /locus_tag="VLJ17_05610"
     CDS             complement(<1..1206)
                     /locus_tag="VLJ17_05610"
                     /inference="COORDINATES: protein motif:HMM:NF013662.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase subunit E"
                     /protein_id="HSV22490.1"
                     /translation="MTDSELDPLRSILAELAPQGRTVLLPALHAAQQFHGWIPEAVAT
                     EVGRILGVPLADVHGVIDFYEMLSREPLGRTVARVCNAPICALAGSDELANALCRHLK
                     VAPGEVSSNGEFTVEHAPCLGLCDHAPALLVGEIALGHGDPGRAAEICAPGEKRPISF
                     VGGDIRILTAHCGQGHPTSFANYSSGGGYTGLKKALTMTPQDVVAELKTAGLVGRGGA
                     AFPTGIKWEGAAKATGQPKYIVCNADESEPGTFKDRILMEEDPHRTIEGMIIAAHAVG
                     ASQGYIYIRGEYPYAFKIMSEAVAEARQAGAIGENIFGSGLNFDIEMRLGAGAYICGE
                     ETALLESIEGKRGFPRIKPPFPTTHGLFGKPTVINNVETFCNVPLIIERGSAEYRKLG
                     TERSPGPKLF"
     gene            complement(1419..>1623)
                     /locus_tag="VLJ17_05615"
     CDS             complement(1419..>1623)
                     /locus_tag="VLJ17_05615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22491.1"
                     /translation="ADMDTHKLGEDGEEAMGHGAFNRTVLTRALQECVEFRAGYSMEY
                     CALTMVDLHLQMKQAALDNPYHP"
BASE COUNT          309 a          472 c          493 g          349 t
ORIGIN      
        1 aaacagcttc gggccggggg agcgctcggt gcccagctta cgatactccg cggagccccg
       61 ttcgatgatc agcgggacgt tgcagaatgt ctccacgttg ttgatcacgg tgggcttgcc
      121 gaataatccg tgcgtggtgg ggaagggagg cttgatgcgc gggaaaccgc gtttgccttc
      181 gatggattcc aacagcgcgg tttcttcgcc gcaaatgtag gcgcctgcgc ccagccgcat
      241 ttcaatatcg aagttcaatc cggaaccaaa aatattttcg ccgatggcgc cggcctggcg
      301 cgcctcggcg accgcttcgc tcatgatttt aaaagcgtag ggatattctc cgcggatgta
      361 aatgtaaccc tgactcgcgc ccacggcatg ggccgcgatg atcatccctt cgatggtgcg
      421 gtgcgggtct tcctccatga gaatgcgatc tttgaaggtg ccgggctcgg attcgtcggc
      481 gttgcacacg atgtacttgg gttggcccgt agccttggcc gctccctccc acttgatgcc
      541 ggtgggaaat gccgcgccgc ctcggccgac caaccccgca gtcttcaact ccgccaccac
      601 atcttgcggt gtcatcgtca aggctttttt cagtccagtg taaccgccgc cactgctgta
      661 attggcaaag gaggttgggt gaccttgacc gcagtgggcg gtaaggatgc ggatgtcgcc
      721 gccgacgaag ctgatcggtc tcttttcacc gggcgcgcaa atctccgctg ctcggccggg
      781 atcgccatgt cccagagcga tttcgccaac aaggagtgcc ggcgcgtgat cgcacaaacc
      841 caaacaggga gcatgctcga cggtgaactc accgttggag ctgacttcgc ccggcgcaac
      901 tttaagatgg cggcacaggg cgttcgccaa ttcatcgcta cccgccaggg cgcagatggg
      961 cgcgttgcac acacgcgcca cggttcggcc caacggctcg cgggagagca tctcgtagaa
     1021 atcgatgacg ccatgcacgt cggctaaggg tacacccaag atgcggccca cctcggtcgc
     1081 aacggcttcg ggaatccagc cgtgaaattg ctgtgcggcg tgcaaggccg gcaagagcac
     1141 agtgcggcct tgcggcgcca actcggcgag gatcgagcgc agcggatcga gttcgctgtc
     1201 agtcatctga tgttccaggc gtcggtgtcg gtttatttct atcgttgcct gtttttatta
     1261 aggagcgacc tggttgatac agttcgataa caatcgtgcc ctacctgaaa gcagtctgca
     1321 aggcatcatt tacagtgaat aaacgtgaag acgggatacg gctcgacagc gctagagcgc
     1381 atcggtctgt gagcgccgct gttgtcgggt gttttcggtc aaggatggta cggattatcg
     1441 agcgcggctt gcttcatctg caagtgcaga tcgaccatcg tcagcgcgca gtattccatc
     1501 gaatagccgg cgcgaaattc gacgcattcc tgcaacgcgc gcgtgagcac ggtgcggtta
     1561 aaagcgccgt ggcccatcgc ttcttcgccg tcttcgccga gcttgtgcgt gtccatgtcc
     1621 gct
//
LOCUS       DATILV010000243         7434 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2104206, whole genome shotgun sequence.
ACCESSION   DATILV010000243 DATILV010000000
VERSION     DATILV010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7434)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7434)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7434
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2104206"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..216)
                     /locus_tag="VLJ17_05620"
     CDS             complement(<1..216)
                     /locus_tag="VLJ17_05620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22492.1"
                     /translation="MTNKQIFRGGLTALAAIVLGTISLSSATAQQSKLRIVQTNSAGD
                     NIHIIDPVTNRAVGEIKGIEAPHGVAVA"
     gene            complement(433..888)
                     /locus_tag="VLJ17_05625"
     CDS             complement(433..888)
                     /locus_tag="VLJ17_05625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22493.1"
                     /translation="MRRASAYTLVVACLLLAAAPLKQANSQPAASPVASPSLDYEFFK
                     AKVEPVFLAKRPGHARCVVCHTFNNAPFHLVSLSPGSTTWNDEQSRRNFQLVQKVVVP
                     GYEGSRLLTHPLAEEAGGDPHHGGGQQFSSKADPEWLTLKEFVLGATLK"
     gene            complement(954..1757)
                     /locus_tag="VLJ17_05630"
     CDS             complement(954..1757)
                     /locus_tag="VLJ17_05630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009029439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV22494.1"
                     /translation="MSRAKLLLLQVIVAVIAIALWHVLSTDDYFGVEVLPPFFFSTPG
                     DVAVRVVRLFASGAIWQHLWVTLVEAVLAFAIGSVGGVLIGFWFARRPMVAAVFDPYV
                     KMINALPRVVLAPIFTLWFGLGIWSKVALGVTLVFFIVFFNVYQGVKEVSPTVLANAR
                     MLGMNDRALMRHVYWPSALSWMFSSLHTSVGFAVVGAVVGEYLGSAAGLGYLIQQAEG
                     IFDVAGVFAGMLILAGFVIAIDGGVTSVERRLLAWRPAAADTSGRDGPT"
     gene            complement(1877..2704)
                     /locus_tag="VLJ17_05635"
     CDS             complement(1877..2704)
                     /locus_tag="VLJ17_05635"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009029967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV22495.1"
                     /translation="MAEIMASDGAATNGAAVSVALTDVTVAFRIAGDATYTAVKDATL
                     AVGEGEFVAIVGPTGCGKSTLLNVAAGLLAPSSGRVEVFGSPLRGLNHTAGYLFQSDA
                     LFPWKTAIENIAIGLEIAGTPAAHARARAEQWMVRVGLVGFGLRYPHMLSGGQRKRIG
                     LAQVLIRDPRILLMDEPFGPLDAQTRQIMGNLLLDLWSADRKAVLFVTHDLEEAIALA
                     DRVVIMSAGPAARIIGDWTVALPRPRDIAEVRHDKTFRDLHRAIWAVLKAEVMRGYT"
     gene            complement(2730..2864)
                     /locus_tag="VLJ17_05640"
     CDS             complement(2730..2864)
                     /locus_tag="VLJ17_05640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22496.1"
                     /translation="MLSVGFNDRCDAIVALGAGDQLEPAVLAFLNSERVLRWVKWPLS
                     "
     gene            complement(3048..3392)
                     /locus_tag="VLJ17_05645"
     CDS             complement(3048..3392)
                     /locus_tag="VLJ17_05645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22497.1"
                     /translation="MGIPADLAIKPAWIPTWLWAQTYHNNILGVTIRAPGVYPPPIYE
                     TVMALVGFRDSLEREKPPFPSGRAVCALSLARRRRAASDRAHRANALFHVFGVSATQA
                     QLVFVIFILMAE"
     gene            complement(3427..3612)
                     /locus_tag="VLJ17_05650"
     CDS             complement(3427..3612)
                     /locus_tag="VLJ17_05650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22498.1"
                     /translation="MRGVTDAAFLARGVHARDAGCACSAESSSGALAGVTYVKRAELP
                     VLAVCNAVAPAMLSGTR"
     gene            3937..5457
                     /locus_tag="VLJ17_05655"
     CDS             3937..5457
                     /locus_tag="VLJ17_05655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MHYT domain-containing protein"
                     /protein_id="HSV22499.1"
                     /translation="MLTVYDCIVTAHDLRLVGLAAVICALASFSAISLLHHVLRSTGH
                     MRFAWLVVSATSTGFGIWATHFIAMLAFSPGLPSAYNITLTVLSLIAAIVLTGTGLAV
                     AATASWAAGAWIGGVMVGGGIAAMHYTGMAAFEIQGRINWDPALVASSIALGGLIGAV
                     ALPVGLRDDRLKWKLLGALLLTVAICSHHFTAMGAVSVIPDPTAEFSPSAIPAGWLAI
                     AVALASFAIILLALGGVAIEMQRVLQNYMRDLERSYQELDDFAYIASHDLKEPLRGLF
                     NHATFLLEDYQDKLDEDGKRRLNRLVQLSQRMERLVNDLLHFSRLGRAGLASQETDTN
                     AVIAEIRLIMEDFLRERCARIIVPRSLPRLVCDKAGVAEIFRNLITNAVKYNDQAERL
                     VEIGFLTSIDTSAGLEHNVFYVRDNGIGIEAEFHDEIFRIFKRLQNAPDGQEPGTGVG
                     LTFVKKIVERHGGRIWLRSKPDEGTIFYFNLNCKLLEPARKVHERDIAPVPVHSHS"
     gene            5423..5869
                     /locus_tag="VLJ17_05660"
     CDS             5423..5869
                     /locus_tag="VLJ17_05660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018072540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV22500.1"
                     /translation="MSHRSQSILIVDDSEDDYEATIRAFKKVSLHNPVVWCRSGRDAL
                     DYLKREGKKPGDGLLPGLVLLDLNMPGLDGRKTLQLIKEDASLKRIPVIVLTTSANER
                     DVQDCYNMGANTYVQKPVTFDGLIEAIKRLKAYWFEIALLCKDALE"
     gene            5866..7422
                     /locus_tag="VLJ17_05665"
     CDS             5866..7422
                     /locus_tag="VLJ17_05665"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV22501.1"
                     /translation="MNERLKILVIDDNEDDRLLYSRCLKKSVAGNYDVSETASGEDGL
                     ARMEKERFACVLLDYSLPGRNGVEILKRIRSKQPAVPVVILTGQGSEEVAVAAMHEGA
                     QNYICKATITTDSLEHVIRGAIQHCAMQKRIVEQRESLEIFARALAHDLKEPVRTIRS
                     LLELLHTEASFTGKAESHFQSVKNAAERMSSLIDTVHLYTRLDGSDKIDRQICDANEI
                     IEAAMANIEQLVRGRQAVITCHRLPQVYANRTQMIQVVQNLLCNAIQHCTMAVHVEVS
                     AEQACGHWVLRVNDNGPGVDKEDVEKLFKPFQRLSRHDTQGLGLGLAVCKRIVELHDG
                     KICYEAKSGNGATFSFSIPKVAPVPGASVPSLQSARARNGGRGLQLATCLLVDDNDID
                     IELAQLFLFERHRLQCNLLVALDGRQALDKLQKGDIDLMLLDINMPKIDGFEVLAQMR
                     SENLLERTAVVMCSTSTYEEDIFKATNLGACGYLTKPPDFGRLKSIIEKSTSLQIVEA
                     DDDLHLLRAA"
BASE COUNT         1592 a         2230 c         2160 g         1452 t
ORIGIN      
        1 ggctaccgca actccatggg gcgcttcgat ccccttgatc tctcccaccg ccctatttgt
       61 cacgggatcg atgatgtgga tgttatcccc ggcagagttc gtttggacga tccgcagctt
      121 cgactgctgc gcggttgccg aggacaagga tatcgtgccc agaacgattg cggccagagc
      181 cgtgagaccg ccacgaaata tttgtttgtt cgtcatgctc gtcatccctc tattcaccgg
      241 ctagttatcc tcctgaggca ttgatcagga gatacgtccg ttcatcagga gacaatcgta
      301 gcccggcagc gaaatccggg accgccctat ccgcacggca acgctgcccc cgggtttcgc
      361 tggcgttcaa cccgggctac ggctcctgat cctcctgagg catcgaccag gagacaagtc
      421 tgttacgcgc cgctatttca gcgtcgctcc aagcacaaat tccttcaacg tcagccactc
      481 agggtcggcc ttcgagctga attgctggcc tccgccgtga tggggatccc caccagcctc
      541 ttcagccagc ggatgtgtga gcagcctact cccctcgtag ccgggcacga ccaccttctg
      601 gaccaactgg aagttccgac gcgactgctc atcgttccag gtcgtgctcc ccggtgagag
      661 tgacaccaag tgaaacggcg cgttgttgaa cgtgtggcaa acaacgcatc gtgcgtggcc
      721 gggacgcttg gcaaggaaga ccggctctac cttggccttg aagaactcgt aatccagcga
      781 cggcgatgcg acgggggaag cggctggttg gctgttcgcc tgcttcagcg gcgcggccgc
      841 cagcaacaga cacgccacga caagcgtata agccgaggcc ctcctcatgc gcaacctccc
      901 acgaaacaat gttattggta actgcaaact gtattcgtga gcgaaagcgc ttgtcaagtt
      961 gggccgtctc gaccgctcgt gtctgcagca gccggccgcc acgccagcaa tcgtcgttcc
     1021 accgatgtca cccccccgtc aattgcaatc acgaagccgg caagaatgag catgccggcg
     1081 aacacgccgg cgacatcgaa tatgccctcg gcctgctgga tcagatagcc aaggcccgcc
     1141 gcggaaccga gatattcgcc aaccacggcg ccgaccactg cgaaaccgac cgaggtatgt
     1201 agcgaagaga acatccatga cagcgcggac ggccagtaga catggcgcat cagcgcgcga
     1261 tcattcatgc cgagcatgcg ggcattggca agcacggtcg ggctcacctc ttttacaccc
     1321 tggtagacgt tgaagaatac gatgaagaac accaacgtga cgccgagcgc gaccttcgac
     1381 cagatgccga ggccgaacca caacgtgaag atcggcgcca gcaccacgcg gggcaatgcg
     1441 ttgatcatct tgacgtaggg atcgaacacg gcggcgacca tgggtctgcg ggcgaaccag
     1501 aagcctatca gcacgccgcc gaccgaaccg atcgcgaagg cgagcaccgc ttccacaagc
     1561 gtcacccaca agtgctgcca aatcgccccg ctggcgaaca gccgcaccac gcgcaccgcc
     1621 acgtcgcccg gcgtcgagaa gaagaacggc ggcaacacct cgacaccgaa gtagtcatcg
     1681 gtgctcagga catgccagag cgcgatggca atgacggcga cgatgacttg gagcaagaga
     1741 agcttagcgc gcgacatgac aaccccgcat gggccgagcc cggatggagc gcagcgcagt
     1801 ccgggcggcc gtggctcaag atgaaacgcc ggtcccagat tataggaccg caaaagaagc
     1861 ggttgctcca accgggctac gtgtatcccc tcatcacttc agccttgagc accgcccaga
     1921 tcgcgcgatg caagtccctg aacgtcttgt cgtgcctcac ctccgcaatg tcacgggggc
     1981 gcggcagcgc caccgtccag tcaccgatga tgcgcgccgc cgggcccgcc gacatgatga
     2041 cgacgcggtc tgccagcgca atcgcctcct cgaggtcatg ggtgacgaac agcaccgcct
     2101 tgcggtcagc gctccacagg tcgagtagca agttgcccat gatctggcgc gtctgcgcat
     2161 cgagcgggcc gaacggctcg tccatcaata ggatgcgcgg gtcgcggatc agtacctggg
     2221 cgaggccgat gcgtttcctc tgcccgccgg agagcatatg cggataacgt agcccgaagc
     2281 ccacaagccc gacccgcacc atccattgct ccgcccgcgc gcgggcgtgc gccgccggcg
     2341 tgccggcgat ctccaggccg atagcgatgt tctcgattgc ggtcttccag ggaaacagcg
     2401 catcggattg gaacaagtag ccagcggtgt ggttgagacc cctaagcggg ctgccgaaaa
     2461 cctcgacacg ccccgacgat ggcgccagca atccggccgc gacgttgagc aaggtggatt
     2521 ttccgcagcc ggtcggcccg acgatggcca cgaactcgcc ctctccgacc gcgagcgtgg
     2581 catcttttac ggccgtataa gtggcatcgc ccgcaatgcg aaacgcaacc gtgacgtcgg
     2641 taagtgcgac cgagactgct gccccattgg tggctgcacc atcactggcc atgatttcag
     2701 ccatcacggc gatatcactt tcggtcctct catgacagcg gccacttcac ccagcgcagc
     2761 acccgttcgc tgttgaggaa ggcgagcact gcgggctcga gctgatctcc ggccccgagc
     2821 gcgacgatgg catcgcaccg atcgttgaag ccaaccgaaa gcactcttcc ttgccccggc
     2881 cccgaaaccc ggtaggctcc tgccgtgcat ccacctctat gacacgtcca cggacgagcg
     2941 caatggcgtc ccgcagaaat ggggatagtt gtgtcaggcc ccgtcattag cctttttgcc
     3001 gcgctttagg ctcggagcca tgccgcggcg atgaaagtct cccgctatta ctccgccatc
     3061 aagatgaaga taacgaagac caattgcgcc tgggtagcgc tgacgccgaa tacatgaaaa
     3121 agagcgttgg cgcggtgcgc tcgatcagaa gccgctcgac gcctgcgagc aagagacaga
     3181 gcgcaaacag cccgcccgct tggaaatggt ggtttctcgc gctccagaga atcgcgaaag
     3241 ccgacgagcg ccatgacggt ctcgtaaatg gggggcggat agacgccggg cgctcggatc
     3301 gtcacgccga gtatgttgtt gtggtaagtc tgcgcccaga gccacgtcgg gatccaggcg
     3361 ggcttgatcg ccaggtcggc cgggatgccc aatcgtcatc gccggacatt tggcagccca
     3421 ctcttcctat cgcgtacccg agagcatcgc cggcgcgacg gcgttgcaga cggcaagaac
     3481 cggcagttcg gcccgcttga cgtaggtcac gcccgcgagc gcgcccgaag acgactccgc
     3541 cgaacatgca cagccggcgt ctctcgcgtg aacgccgcgc gccagaaatg ccgcgtcggt
     3601 cacgccgcgc atgtgccggc gagcagttgc agagcttggc actgttcggg cgtcttggcg
     3661 cctcgctccg cctcgaggca atcggcctcg cgtgcaagcc gacgattttt ggcatcgatg
     3721 ccgaaccgga ttcgaatgcg ttgttgaaac taacgtcaac aagcggtctg tggaattggt
     3781 cgcatgccgt tgctgcgccg ctaacagcta ttagccaaag gaagaattac gtgaattaac
     3841 agcgcgaagc tttatttacg agattttacg cattgcggcg tagcatcggg ccgcaaacag
     3901 ctcccgacag caaattttag tcgtagtgag agccgcatgt taaccgtata tgactgcatt
     3961 gtgacggcgc atgatcttcg attggttggt ctagcagcag tgatctgcgc gcttgcctcg
     4021 ttctccgcca taagcctgct tcatcacgtg ctccggtcaa ctggccatat gcgttttgcc
     4081 tggcttgtcg tttcggcaac gtcaaccgga tttggtattt gggcaacgca cttcattgcc
     4141 atgttggcgt tttcgccggg actgccgagc gcgtacaaca tcacactcac agtcctgtcg
     4201 ttgatagccg cgattgtgct caccggcaca ggccttgccg tcgccgcgac cgcgagctgg
     4261 gcggcgggag cttggattgg cggcgtcatg gtcggcggcg gtatcgcggc catgcattac
     4321 acaggcatgg ccgcgttcga gattcaggga cggatcaatt gggacccggc tctggtggcg
     4381 tcatccattg cgctcggcgg cctgatcggc gccgtcgcgc tgccagtcgg actgcgtgac
     4441 gatcggttga aatggaaact ccttggcgcc ctgctcctga cagtagcaat ctgcagccat
     4501 cacttcacgg ctatgggtgc agtctcggtc atcccggatc caaccgctga attctctccc
     4561 tccgcgattc ccgccggctg gctggcgatc gcggtagcgc ttgcgagttt cgctatcatc
     4621 cttcttgcgc taggcggcgt cgccatcgag atgcaacggg ttttgcagaa ctatatgcgc
     4681 gacctggagc gcagctacca agaactggac gatttcgcct atatcgcatc gcatgatctg
     4741 aaggaaccgc tgcgaggcct gttcaatcac gcaacattct tgttggagga ctatcaagac
     4801 aagctcgacg aagacggcaa gcgtcgtctc aaccgcctgg tgcagcttag ccagcgcatg
     4861 gagcggttgg tcaatgactt gttgcatttt tcacggctcg gccgcgccgg acttgcgtca
     4921 caggagaccg ataccaacgc ggtcatcgcc gagattcggc tgataatgga agactttctc
     4981 agggagcgat gcgcgcgcat catcgtaccc cgctcgctgc cacgccttgt ctgcgacaag
     5041 gcaggagttg ccgagatatt ccgcaatctc attaccaatg cggtcaagta caacgaccaa
     5101 gcagaacgcc ttgtggaaat tggatttttg acctcgatcg acacgagtgc ggggcttgag
     5161 cacaacgtgt tctatgtcag ggacaacggc attggtatcg aagccgaatt ccacgatgaa
     5221 atcttccgca ttttcaagag gctgcagaac gcgcccgatg ggcaggagcc cggcaccggc
     5281 gtcggactga cctttgtgaa gaaaatcgtc gagcgtcacg gcggtcgcat ctggctgcga
     5341 tccaagccgg acgagggcac gatcttctac ttcaatctca actgcaagct cttggaacca
     5401 gcgagaaaag ttcatgagcg agatatcgca ccggtcccag tccattctca tagttgatga
     5461 cagcgaggat gactatgagg cgacgatccg cgccttcaaa aaagtcagcc tgcataaccc
     5521 cgttgtctgg tgcaggtccg gccgggacgc gcttgactat ctgaaacggg agggcaagaa
     5581 gccaggcgat ggcttgctgc ctgggcttgt tctgctcgat ctcaatatgc cggggcttga
     5641 cggccgcaaa acgctgcagc tgatcaaaga agatgcgagc ctgaaacgaa ttccggtgat
     5701 tgtcctgacc acgtccgcga acgagcggga tgttcaggat tgctacaata tgggcgccaa
     5761 cacctacgtg cagaagccgg tcaccttcga cgggctgatc gaggcgatca aacgcctcaa
     5821 ggcctattgg tttgaaattg cactgctgtg caaggacgcc ttggaatgaa tgagcgccta
     5881 aagatactcg tgatcgatga caatgaagac gatcggttgc tttacagccg ctgtctaaaa
     5941 aagagtgtcg cgggcaacta tgacgtcagc gaaaccgcca gcggtgaaga cggactggcg
     6001 cggatggaaa aggagcggtt tgcctgcgtc ctcctcgact attccctgcc gggtcgcaac
     6061 ggtgtggaaa ttctcaaacg aattcgctcc aagcagcccg ccgttccggt ggtgatcctg
     6121 actggccagg gcagtgaaga ggtggctgtg gctgccatgc acgagggcgc ccagaactac
     6181 atttgcaagg caacaattac gacagactca cttgaacatg tcattcgcgg cgccattcaa
     6241 cactgcgcga tgcaaaagcg gatcgttgag cagcgggagt cccttgaaat ttttgcccgc
     6301 gccttggccc atgatctcaa ggagccggta cgcacgattc gctcattgct ggaattgcta
     6361 cataccgaag cgtcatttac aggaaaagcc gagtcccatt ttcagtcggt caagaatgct
     6421 gccgagcgaa tgagttcgct gatcgatacc gtccacctct acactcgcct cgacggttcc
     6481 gacaagatcg accgccaaat ctgcgatgcc aacgagatta ttgaggcggc gatggcaaac
     6541 attgaacaac tggttcgcgg gcggcaggca gtcatcacct gtcatcgtct tccgcaggtt
     6601 tatgcgaacc gaacgcaaat gattcaggtc gttcaaaacc tgctatgcaa tgcgattcag
     6661 cattgcacga tggcggtaca tgttgaagtg agcgccgagc aggcctgcgg ccattgggtt
     6721 ttgcgcgtta atgacaatgg tccgggcgtc gacaaagagg atgttgaaaa gcttttcaaa
     6781 cccttccaga gattgtcccg ccacgacacg cagggcctgg gattggggct cgcggtctgc
     6841 aagaggatcg ttgaactcca cgatggtaag atttgttatg aggcgaaatc cggaaatggg
     6901 gccacgttca gttttagcat acccaaggtc gcgccagtgc cgggcgcgtc cgtcccttcc
     6961 ctgcaatcgg caagagcccg caatggcggt cggggcctac agctcgccac ttgcttgcta
     7021 gtggatgaca acgatatcga tattgagctc gcgcagcttt ttctgttcga acgtcatcgg
     7081 cttcagtgca acttgctggt ggcgctggac ggccgtcaag ccttggacaa gctgcaaaag
     7141 ggcgatatcg atctgatgct tcttgatatc aacatgccca aaatcgatgg gtttgaggtg
     7201 ctcgcgcaaa tgcgcagcga aaatctcctc gaacgcactg ccgttgtgat gtgctcgact
     7261 tcgacctacg aggaggatat tttcaaggca accaatctcg gtgcgtgcgg atacctcacg
     7321 aaaccaccgg atttcggtcg gttgaagtcg attatcgaga aatctacctc gctgcagata
     7381 gtcgaagcgg acgacgatct tcatttgctc cgcgccgcct gaatcaaggc tcgc
//
LOCUS       DATILV010000244         7853 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3637023, whole genome shotgun sequence.
ACCESSION   DATILV010000244 DATILV010000000
VERSION     DATILV010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7853)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7853)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7853
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3637023"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            229..1023
                     /locus_tag="VLJ17_05670"
     CDS             229..1023
                     /locus_tag="VLJ17_05670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HSV22502.1"
                     /translation="MSSVDDPGIPPGVPPAKPPVHYLGIGARVRNYFLTGLVVAGPLA
                     ITVWLTWSFITWVDDLVRPFIPVAYRPETYLPGKIPGSGLVIAFVALTLLGFLTANLV
                     GRKLVEAGEHLLDRMPLVRSIYKGLKQVFETLFSESGSSFRTVALIEFPAPGMWSLVF
                     LSQRPSNDIVARLPRREEYVSVFMPCTPNPTTGFFFYVERSAVIELDIPVEAAAKLIM
                     SAGLIQPGNGNGTKKLAALAETAKLANAARIEHAGEQSGKVGEKSG"
     gene            complement(1838..2083)
                     /locus_tag="VLJ17_05675"
     CDS             complement(1838..2083)
                     /locus_tag="VLJ17_05675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22503.1"
                     /translation="MRLRALLLLLGAAALFGATPATSASSPSAYPWCTDDRAAPDSCY
                     YDSGGRRCWVTMTGLGVCIPIPPTPPRQRRVITEGKR"
     gene            complement(2182..2469)
                     /locus_tag="VLJ17_05680"
     CDS             complement(2182..2469)
                     /locus_tag="VLJ17_05680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22504.1"
                     /translation="MHTVAVRHLPACFVVALLAFFGIGTSVPAAECYPHCDYAHYYGP
                     FDFTYVKPRLFAYPRCDLMGNCAPQMVYSTSGFRRGTITVRFPRATARQPQ"
     gene            complement(2561..4774)
                     /locus_tag="VLJ17_05685"
     CDS             complement(2561..4774)
                     /locus_tag="VLJ17_05685"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HSV22505.1"
                     /translation="MRPSLLNPLFASVTTLAGIAGKTDKLYGRLTGRDTGARVLDLVF
                     HLPTGTVDRRKQPKLRDVVPGSVVTVAIDVESYRPPPPNRPRAPFLVYASDETGTLTI
                     TYFSIRKEQIERMLPRGSRRYVSGTVTSYDGMLQMAHPDRVVDAAGFATMALVEPIYP
                     LTEGLSQNVLRRVITAALSKLPALPEWLDAAYVARAGWPDFAGALVKLHRPAEPVDVA
                     PDGKAWSRLAYDELLASQLALALVRAHLRRPGGRRGAPLEGRGGAGGGGMTVTHLSTP
                     TQEGHPLPSPQGGGEKQSLQAKLTAALPFALTASQEAAIAAIARDLTKPERMLRMLQG
                     DVGAGKTVVALFACAAAIAAGGQAAVMAPTEILARQHLKTIAPLAAAAGIHVAILTGR
                     ERGRERTALLAQLAQGEIDLLIGTHALYSEDVAFANLALAVVDEQHRFGVHQRLALAG
                     KGKAIDMLVMTATPIPRTLVLTYFGDMDISELRDKPAGRQPIDTRTIPLDRLDEVIAA
                     VGRAIRDGRRIYWVCPLVEESENTDLAAAQARHAELVAQFGAAVDLVHGRMKGADKDA
                     AMARFAAGETRILIATTVIEVGVDVPEATVMVIEHAERFGLSQLHQLRGRIGRGQNAP
                     QRSICILLYRAPLGETGRARLAIMRDTEDGFRIAEEDLRLRGEGDVLGTRQSGLPGFR
                     VAQPAVHRDLMVAARDDAALVLTRDPGLTTERGQALRMLLYLFERDEAVRLIGAG"
     gene            complement(4866..5402)
                     /locus_tag="VLJ17_05690"
     CDS             complement(4866..5402)
                     /locus_tag="VLJ17_05690"
                     /inference="COORDINATES: protein motif:HMM:NF021361.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2059 domain-containing protein"
                     /protein_id="HSV22506.1"
                     /translation="MNVLRVVLLASALGLGGIVAAASQGANTTAPAAAPSAEAIAVAK
                     ELMALVSGDMIGDLTGKMVAQAWPTVEQSLRTQYPQLDAATSGELRTEFEKQIAANVA
                     KAMNDAPAIYARYMTIAEMRDIQAFYRTPTGAKTLKLMPQINSEVMGQFFPRIQSMMV
                     RVNSALVDILQKHGYTTR"
     gene            5751..6671
                     /locus_tag="VLJ17_05695"
     CDS             5751..6671
                     /locus_tag="VLJ17_05695"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV22507.1"
                     /translation="MIARTGELQKVRSSMMNAVHDLPLLVARDEGFFRDEGLDVEILK
                     TPGSGQHASDHRALRDNIFTRTLEASYEDGQCDQFRMCEWGIMKRAVESIVDTGHRPA
                     KIVALGSAMSSFAIVTDPKLNIYEPEQLKNTPIGVSPFNGSHFTMLKMMEGFVKRDEI
                     KWEFVGTHRERLEALRGGKIKAVSLQEPWISVAEKQGCRVLIESHSTRSEAAGDELDG
                     PTLAKMFRAEARAAAAIDQTPEKYIHYLLEEAGGLIELKDLKLSRLLNAPPAPYTRDR
                     FNDNYQWTLGWGLVSPGATYENTVDNRAWQ"
     gene            6889..7422
                     /locus_tag="VLJ17_05700"
     CDS             6889..7422
                     /locus_tag="VLJ17_05700"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HSV22508.1"
                     /translation="MATPQTNPLEELYRRPGFMIRRVHQIAVALFIEETGKLGVTNSQ
                     YGILFVLKNRPGIDQISVANLLGLDRSTTGMVLKKLEQDGLVARSVGAHDRRRHSLQL
                     TKSGERLLSQLAEPARKAQARVLCAFTPREQALFLQLLDKFTRAFNGSTRVPLDPQRS
                     PQKARARVVRTQKASGR"
     gene            complement(7439..>7853)
                     /locus_tag="VLJ17_05705"
     CDS             complement(7439..>7853)
                     /locus_tag="VLJ17_05705"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HSV22509.1"
                     /translation="RQDLCIGKKATRTSATLAAVLAVAGLTYSPARAEGDAAKGKAAF
                     VRQCIICHTNEKGGENRFGPNLFGIIGRKAGTVSGYAYTNAFKTRANWEWTEDAVGGW
                     MMFPSTMVPGTAMGVFQGIAEKDRDDLVAYLATLK"
BASE COUNT         1532 a         2429 c         2435 g         1457 t
ORIGIN      
        1 cctgcccggc tcgactattc cggccgacag ggaattcacc ctgccctagg gcagtccccc
       61 cacctccacg ggatggtgac catattcgat tgcccggcct ttggggaaga ggtgtccgtc
      121 ctgcgcatac acgccacaaa acgcgagagt ggcgccaaga cacccaaacg ccctatatta
      181 tcgtcggaat cacaatgtga tcgttcagcc cagcaaagta gcgcacttat gagttcagtc
      241 gacgaccccg ggataccgcc gggggttccg cccgccaagc cgcccgtcca ttacctgggc
      301 atcggggctc gcgtgcgcaa ctatttcctc actggtctcg tggtggcggg accgcttgcc
      361 atcacggtgt ggctcacttg gtcgttcatc acctgggtcg acgatctggt gcggccgttc
      421 attccggtgg cctatcgccc cgaaacctat ctgcccggaa aaattcccgg cagcggtctc
      481 gtcatcgcat ttgtggcgct gacgctgctt ggcttcctta ccgcaaacct ggtcggccgc
      541 aagctggttg aggcgggtga gcacttgctc gaccgcatgc cgttggtgcg ttcaatctac
      601 aagggcctga agcaggtgtt cgaaaccctg ttctcggaat ccggctcaag ctttcgcacc
      661 gtcgctctga tcgaatttcc cgcacctgga atgtggtccc tggtgtttct gtcccagcgg
      721 ccgagcaatg acatcgtggc gcgcctgccg aggcgcgagg agtacgtctc ggtgttcatg
      781 ccctgtaccc cgaaccctac cacgggattc ttcttctatg tggagcgcag cgccgtcatc
      841 gaactcgaca tcccggtcga ggccgccgcg aagctcatca tgtcggcagg gttgatccaa
      901 cctggcaacg gcaacggtac aaaaaagctg gcggcgctcg ccgaaaccgc gaagctggcc
      961 aatgccgcgc ggatcgagca cgcaggggag caaagcggaa aggtgggtga aaagtcaggg
     1021 taaccggtgc atggccgttg ctcagccgaa agtcatggcc gactacgggc tgcgcctcct
     1081 atacctccag cacctcctac gccccctaaa cccgcagcac ctcctacgcc ccctaaacct
     1141 gcaggtgcac gcggtgcggc atggatttcg tctacccggg ttccaaaggc gtcattgaac
     1201 ccgacgtccc gatcaatgcc gcgaggttgt ggtcggccgg ggtcactcgc cccgataccg
     1261 ggcgaatttg ccccagcagg caggttcccg agtgaggagg cggaggatga ggagggctgc
     1321 ggcatgaccg gaggagcgcg gtgatgggct tgtttgggtc gttctcggga atcgcatcgt
     1381 gatgccttgg cttctgcgtc tggaaattga ctggacaagg gcgcacgaac gaggtccctg
     1441 gggccgcagc gtgggtcacc gtagaggttc ggctgtacac gattgcagtg cggatcgcac
     1501 tccgctgccg aaacagtgcg cgttccaacc caaacggtag ccaacagggc tgccgtaaaa
     1561 aatgttgtga cgttgcgctg ccacgccgac gcggccatgg aattcatgcc catgacgata
     1621 ctccctcaca tcgcttaccg cccgtaccgg gaacgtattt gtgcttttat cgttgccatc
     1681 ttgatgaaag aaatattgaa tcagaaatcg atcgttaatt gctcgatgtc gctgaacgct
     1741 tatttcttgt agacggcctt actgtcctgt tgcggcgagc gcgcaaagca gatgtttcgc
     1801 aacatggacc tcccccgtgt tgccaaaaga aagctggtca acgcttgccc tccgtgatga
     1861 cacgtcgctg gcgtggcggc gtaggcggga ttggaatgca cacgccgagc ccggtcatcg
     1921 tcacccagca acgccgcccg ccgctgtcat agtagcagga atccggtgct gcgcggtcat
     1981 ccgtgcacca cgggtacgcc gatggcgaag atgcggacgt tgccggggtg gcgccgaata
     2041 gtgcggcggc gccgaggaga agtaaaagtg ctcgcaaccg catcggtgtc tcccgttact
     2101 tgagcaagtt tttcggaaag ccgcagcgtt ggttatcaga cgtcttcatt catctgccag
     2161 cggtccacag gccctgaaac ctcattgcgg ttggcgtgcc gtcgctcgcg gaaatcgcac
     2221 cgtgattgtc ccccttcgaa acccggacgt ggagtagacc atctggggag cgcaatttcc
     2281 catgagatca cagcgcgggt aagcgaacag acgcggctta acataggtaa agtcgaacgg
     2341 accgtagtaa tgggcgtagt cgcagtgcgg atagcactcc gcggccggaa cggacgttcc
     2401 aatgccaaag aaggccaaca aagcgactac aaagcatgcc ggcaaatgac gcaccgcgac
     2461 cgtatgcatg acgaccccct aatggctcac ggtttatggc tcacggtttg tttcgcgagt
     2521 ctacatcgtc gggcttcgtg acggaagagc ccgtggcgca tcaccccgcc ccgatcaggc
     2581 gcactgcctc gtcgcgctcg aacagataga gcagcatgcg tagcgcttgg ccgcgctcgg
     2641 tcgtaagacc aggatcacgc gtgagcacca gcgccgcgtc gtcgcgagct gccaccatca
     2701 ggtcgcgatg caccgcaggt tgggcaaccc ggaagcccgg caggccgctt tggcgggtgc
     2761 cgagcacatc cccttcgccg cgcaggcgca agtcctcttc tgcgatgcgg aaaccgtcct
     2821 cggtgtcgcg catgatggca agccgtgccc tgccagtttc gccaagcggc gcccggtaga
     2881 gcaaaatgca aattgatcgc tgaggggcgt tttggccgcg accgatgcgc ccgcgcagct
     2941 ggtgaagttg ggagaggcca aagcgctcgg catgctcgat caccatcacg gtcgcttcag
     3001 gtacgtcgac cccgacttcg atcaccgtgg tggcgatcaa gatgcgggtt tcacccgccg
     3061 caaagcgcgc catggcggcg tccttgtcgg cgcctttcat gcgcccgtgc acgagatcga
     3121 cggctgcgcc gaattgcgcc accaactcgg cgtgacgcgc ctgcgcggcc gcgagatcgg
     3181 tgttctcgga ttcttcgacc agcgggcaca cccaatagat ccgccggccg tcccggatgg
     3241 cacggccgac cgcggcgatc acctcgtcga gacggtcgag cgggatagtg cgcgtatcga
     3301 tcggctggcg gccggccggc ttgtcgcgca gctccgaaat gtccatatcg ccgaaataag
     3361 tgagcaccag cgtgcgtggt atcggggtcg cggtcatcac cagcatgtcg attgccttgc
     3421 ccttgccggc gagcgcgagg cgctgatgga cgccaaagcg atgctgctcg tcgaccacgg
     3481 cgagcgcaag gttggcaaac gccacgtcct cagaatagag cgcatgcgta ccgatcagga
     3541 gatcaatctc gccctgcgcg agctgcgcca gcagtgcggt gcgctcgcgt ccgcgctcac
     3601 gaccggtgag aatggcgacg tggatcccgg cggccgcggc cagcggcgcg atggtcttga
     3661 gatgctggcg ggcgaggatt tcggtcggcg ccatcacggc cgcctgtcca ccggccgcaa
     3721 tcgctgccgc gcaggcaaac aatgccacca cggttttgcc ggcgccgacg tcgccctgca
     3781 acatgcgcag catccgttca ggcttggtga gatcgcgcgc aatggcggcg atggcggcct
     3841 cttggctcgc cgtgagggcg aagggcaggg cggcggtgag ttttgcctgc agagattgct
     3901 tctcccctcc cccttgtggg gagggcaagg ggtgcccctc ttgggtcggg gtcgataggt
     3961 gggtcaccgt catgccaccg cctcccgccc ccccacgacc ctcaagggga gccccccgcc
     4021 gcccgccggg ccgacgcaga tgggcgcgca cgagcgcgag cgccaactgg ctcgcgagca
     4081 actcgtcata ggcgagccgc gaccacgcct taccgtcggg cgccacatcg acgggttctg
     4141 ctggccggtg cagcttgacg agcgcaccgg cgaagtccgg ccagccggcg cgggccacat
     4201 aggccgcatc gagccattcc ggcagtgccg gcaatttgct gagcgccgca gtgatcaccc
     4261 tgcgtagcac attctgcgac agtccctcgg tcagtggata gatcggctcg accaacgcca
     4321 tagtggcaaa tcccgccgca tcgaccacgc ggtcgggatg cgccatctgc agcataccgt
     4381 cataggacgt gacggtgccg gatacatagc gtcggctgcc ccgtggcagc atcctttcga
     4441 tctgctcctt gcggatggaa aaatacgtga tggtgagggt gccggtctcg tccgacgcat
     4501 agaccagaaa gggcgcgcgc ggccggttcg gcggcggcgg gcggtagctc tccacatcga
     4561 tcgcaacggt aacgacactg ccgggcacca catcgcgcag ctttggctgt ttgcgccggt
     4621 cgacggtgcc ggtgggcaga tgaaacacga gatcgagcac ccgcgcgccg gtatcgcgcc
     4681 cggtgagcct gccgtacagc ttgtcggtct tgccggcgat gcccgcaagc gtggtgacgg
     4741 aggcaaacag aggattgaga agactcggcc gcatgacccg atattgcgcc gaagaggggt
     4801 gcgaagggta gggtggcgcc agcacaccac cgctcaatcg actgcgtcgg cgctcgcgct
     4861 tctccttacc tggtagtgta gccgtgcttc tgcaggatgt cgacgagcgc gctattgacg
     4921 cgcaccatca tgctttgtat gcgaggaaaa aactgtccca tcacttccga attgatctgc
     4981 ggcatcaact tcaatgtttt ggcgccggtc ggggtccgat agaaggcctg gatgtcacgc
     5041 atttccgcaa tcgtcatata gcgggcatag atggcgggtg cgtcgttcat agctttagcg
     5101 acgttggcgg ctatttgttt ttcaaattcg gtgcggagct ccccgctggt tgcggcgtcg
     5161 agttgtgggt actgcgttcg cagcgactgc tcgaccgtcg gccacgcctg ggcaaccatc
     5221 ttgccagtga gatcgccgat catatcgccg gacaccagcg ccatcagctc ctttgccacc
     5281 gcgattgcct cagcggacgg cgcggcggcg ggtgccgtgg tgttggcgcc ttgtgacgcg
     5341 gccgcaacga tgccgcccaa accgagagcc gatgccagca gcactacacg taggacattc
     5401 ataatattct cctctcacaa tcgttgagtc caaagccggt tacaccttta ggtagaacgg
     5461 cactctatca cgccatcgcc atcacgccat tggcggattt ccgacacgga ccgacgtcgc
     5521 gccagggacg tggcccggct ggaggagcgc caccctggcc gtaaggcggg gatcgcgccg
     5581 atttggatat tgccaattgg aaaggacatt cccggatttc gccgcacctc atccggacgc
     5641 ctaccaccag cgacggccaa gattgacaga cgtctgacga ttcgtattga cagacgtctg
     5701 atgatcgatg gagtatccaa ccatcaagaa cgtcataaga ggaagcggcc atgattgccc
     5761 ggacaggcga gctccaaaaa gtacgatctt caatgatgaa tgcggtccac gacttgcccc
     5821 tgctggtcgc ccgtgacgaa ggcttcttca gggatgaggg cctggatgtc gagatcctca
     5881 agacgccggg gtccggtcag cacgcatccg atcatcgggc gctgcgcgac aacattttca
     5941 cacgcacgct ggaggcctcc tatgaagatg gccagtgcga tcagttccgg atgtgcgagt
     6001 ggggcatcat gaagcgggcg gtcgagtcca tcgtcgatac cgggcatcgt ccggccaaga
     6061 tcgtggcgct gggctcggcg atgtcgagtt tcgccatcgt caccgatccg aagctcaaca
     6121 tctacgaacc ggagcagctg aagaatacgc cgatcggggt gagccccttc aacggctcgc
     6181 atttcacgat gcttaagatg atggaaggct tcgtgaaacg cgatgaaatc aaatgggagt
     6241 tcgtaggtac ccatcgcgag cggctggagg ctttgcgagg aggcaagatc aaggccgtca
     6301 gtctgcaaga gccgtggatc agcgtcgccg aaaagcaggg atgtcgcgtt ctgatcgaat
     6361 cccactcgac ccgcagcgaa gcggccggcg acgagctgga cggaccgacg ctcgccaaga
     6421 tgttcagggc agaggcgcgc gctgccgcag caatcgacca gacccctgaa aaatacatcc
     6481 actatctgct cgaggaagcg ggcggcctga tcgaactcaa agacctcaag ctgtcgcgat
     6541 tgttgaacgc cccaccggcg ccatacacgc gcgatcggtt caacgacaat tatcagtgga
     6601 cgctcggttg gggtctcgtt tcccccggcg caacttacga gaacacagtc gacaaccggg
     6661 cttggcagta atatgaggtg acgcatcgtc ttaacctctc accgccttag gagaggtcga
     6721 tggcgagcaa acgggtctag cattcggccg gcccgatgac aggctctccg cgagacggcg
     6781 ggtgaggggc gctcggacga acgtgcgaga ccaatcgccc ggatgacttg cggggcttgc
     6841 aatccgaccg ctccccaagc ggggagaggt gaagtctgac acgccgaaat ggcaacgccg
     6901 caaaccaatc cactggaaga gctatatcga cgtccgggct tcatgatccg gcgcgtgcat
     6961 cagattgcgg tagcgttgtt catcgaggaa accggcaaac ttggagtaac taacagccag
     7021 tacggcatct tgttcgtgct caagaaccgg cctggcatcg atcagatttc ggtcgccaat
     7081 ctattgggtc tcgatcgctc cacaaccgga atggtgctca agaagctgga acaggatggc
     7141 ctggtagcgc ggtcggtcgg cgcccacgac cgccgccgac acagcctgca actgacaaaa
     7201 tccggcgaga gactgctttc tcaactcgca gagccggcgc gaaaagccca ggcgcgcgtg
     7261 ctctgcgcgt tcacaccgcg cgaacaggcg ctctttcttc agttgctcga caaattcacg
     7321 cgcgcgttca atggatcaac gcgcgtcccg cttgatccac agcggtctcc ccagaaggcg
     7381 cgagcacgtg tcgtgcggac gcagaaagca tctggacgct agcaagctgt cgcgggcgct
     7441 acttcaacgt cgccaaatac gccaccaaat cgtcgcgatc cttttcggcg atgccctgga
     7501 aaacccccat ggcggtgccc ggcaccatgg tggaggggaa catcatccag ccgccgacgg
     7561 cgtcctcagt ccattcccag ttggcgcggg tcttgaacgc attggtgtag gcgtagcccg
     7621 agacggtgcc ggccttcctg ccgatgatgc cgaacaagtt ggggccgaac cggttctcgc
     7681 cgcccttctc gttggtgtgg cagatgatgc attggcgcac aaacgcggcc ttgcctttag
     7741 cggcatcgcc ctcagcccgg gccgggctgt aagtaagccc cgcgacggcg agcactgcgg
     7801 cgagggtggc ggaggttcgt gttgcttttt tcccgataca caagtcttgc cta
//
LOCUS       DATILV010000245        10196 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_569332, whole genome shotgun sequence.
ACCESSION   DATILV010000245 DATILV010000000
VERSION     DATILV010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10196
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_569332"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(81..323)
                     /locus_tag="VLJ17_05710"
     CDS             complement(81..323)
                     /locus_tag="VLJ17_05710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22510.1"
                     /translation="MRGIKIDITCLGDPARTFEHIVILAVFGILDLDDLVDRCRKVGQ
                     FHEIMCSAAPSRLASSHPMASALKPPYDPSFATTTR"
     gene            complement(399..1406)
                     /gene="bioB"
                     /locus_tag="VLJ17_05715"
     CDS             complement(399..1406)
                     /gene="bioB"
                     /locus_tag="VLJ17_05715"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010913547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004076 - biotin synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HSV22511.1"
                     /translation="MDDRTHSPIPVADPILARCLSGAVRRDWTRTEVQALFDLPFPDL
                     IFHAQRIHRLNFDPREVQISTLLSIKTGGCPEDCAYCPQSARHHASVKADKLMEVSAV
                     VDEARVAKAAGARRFCMGAAWRSPKDRDLDQICAMVEGVRALGLETCATLGMLTAAQA
                     ARLKAAGLDYYNHNLDTSPEFYGEIISTRVYQDRLDTLGHVRAAGIHVCCGGIVGMGE
                     GRHDRIGMIAALASLPAHPESVPINLLVRVEGTPLENQNTLEPLEFVRTIAAARIAMP
                     ASVVRLSAGREDMREETQALCFLAGANSIFYGPKLLTTPNPERQHDIALFDKLGLVSM
                     R"
     gene            complement(1782..2852)
                     /locus_tag="VLJ17_05720"
     CDS             complement(1782..2852)
                     /locus_tag="VLJ17_05720"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV22512.1"
                     /translation="MASHWKSVLQRARREPGTCRGGADGCLEGAPKKTLYDLIGARAG
                     DDAAALKKAFRSAARAYHPDLHPEDPDAPFRFRQIVAANSILRDAEQRAVYDELLQHS
                     NLREVKPPATYDQLQQLKRGRHWSKTTRTTVAVAVIAALVGGYGLLAPLPTTAVIALI
                     ADMDNARGPDETTGAQLMVPTNPAHRDEPEALGGAPAPEVVSRDVDFYRKRAIAAYRS
                     GDFPNAIIELDEAIRLDPNDVKAYNIRGNAFDEIGAFESALADYDQAIRIDPNNPAVF
                     RDRAILWRRQGALDKALVDLDRAIRFSFGSANLYCERGVVWSEKGRRDRALADFSRAA
                     EIDLNFVTAYLSRDVVMRHNSE"
     gene            complement(2945..3946)
                     /locus_tag="VLJ17_05725"
     CDS             complement(2945..3946)
                     /locus_tag="VLJ17_05725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012559014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSV22513.1"
                     /translation="MSTTSRRDFVLSAAVAGAALGLDKSLALTPPVRTQRTPDPKPGY
                     IRYKVGDAEITTLYDGIWEKAHDPKYFGSSNVTVAEVKQALAAAGLTTAFVPIPITVF
                     VVKLNGKLIMCDSGGGNQVQAFNPDSVFVSGKLMVNMKAAGIDPNKIETILVSHFHPD
                     HIFGLLEKGTNAPVFPNAEIIVPAAEYKWWTDPSLTGRLPEWRRPLAQRIQTVIPNWK
                     NVLPVEGEDEVVPGIYFVKAPGHTAGHTAFHLTSGKEQLMFSNDAAYVPAFSFTHPQW
                     HGAFDQDGALAEASRRKLLDRVVADGMMICGAHFPWPALAKIKRDGASYALTTVKSV"
     gene            complement(4306..7095)
                     /gene="fdhF"
                     /locus_tag="VLJ17_05730"
     CDS             complement(4306..7095)
                     /gene="fdhF"
                     /locus_tag="VLJ17_05730"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012452237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009326 - formate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0008863 - formate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_process: GO:0015942 - formate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HSV22514.1"
                     /translation="MSKIEAKPSTVKFTLDGREVEAGTGETIWQVAHRLGTDIPHLCY
                     APEPGYRADGNCRACMVEIEGERVLAASCIRKPTNGMKVTTGSDRAKAARQMVFDLLI
                     SDQPDRATVAHDPSSKFWSWADRMGISVGRFPKRHHPQPDRSHTAMAVNLDACIQCNL
                     CVRACREVQVNDVIGMAGRGHGEKIVFDFDDPMGASTCVACGECVQACPTGALMPSTL
                     VGSDNVRGAYPDRQVNSVCPYCGVGCQLTYHIKDDKLLYVTGKDGPANHNRLCVKGRF
                     GFDYVHNPERLTRPMIRRDGVPKQVDDTVDPRNPWTHFRLATWEEALNRAAAGLKRIR
                     DTHGARALAGFGSAKGSNEEAYLFQKLVRTGFGSNNVDHCTRLCHASSVAALMEGVGS
                     AAVTATFNECRNSDVIVVIGANPTENHPVAATFFKQAAKRGAKLIVMDPRGQALKRHA
                     THMLQFRNGADVAMLNALLNVIITEKLYDQQYVQTFTEGFPQLAEHIRDFTPEQMAPI
                     CGLDADTLRTVARTYARAQSAIIFWGMGVSQHTHGTDNARCLIALSLICGHVGRPGTG
                     LHPLRGQNNVQGASDAGLIPMFFPDYQSVEDPNTRAKYESVWGTTLDPKRGLTVVEIM
                     DAVHRDEIKGMYIMGENPAMSDPDLNHAREALAHLDHLVVQDLFLTETAAYADVILPA
                     SAWPEKDGTVTNTNRQVQMGRQALPLPGDAKLDWWIIQEIARRIGLAWNYTHPSEVYT
                     EMASLMPSLDNISWDRIAREDAVTYPSDAPDKPGHDVVFDKGFPRPGGFGKLVAAKLS
                     PPNEVPDAEYPMVLTTGRQLEHWHTGAMTRRASVLDAIEPAAVASLSRGEIARLGIAP
                     GDMVRVTTRRGTVELAVRQDDGIPDGVVFIPFAFVEAAANLLTNPALDPFGKIPEFKY
                     CAARLERVAAREAAE"
     gene            complement(7170..8864)
                     /locus_tag="VLJ17_05735"
     CDS             complement(7170..8864)
                     /locus_tag="VLJ17_05735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase subunit E"
                     /protein_id="HSV22515.1"
                     /translation="MTTEKPQTSRRRPRQTPKGRQTDPQALGEVKALLGTRARRRDLL
                     IEFLHLIQDHYGHISASHLAALADEMKLAQAEVYEVATFYAHFDVVKDGPAPPAVTVR
                     VCDSLSCAMAGAERLIAALPGKLDTDVRMLRAPCMGACDRAPVAAIGHVQVMQADAEK
                     IAAAVGVNAHAHAYKPSKDFTAYQAAGGYALLRSCLGGQRSRDDIIKAVSDAGLRGLG
                     GAGFPTGRKWTLVRAEPAPRLMAVNADEGEPGTFKDRYYLERDPHRFIEGMLVAAWVV
                     EAAEAYIYLRDEYPEIRLMLNDELAKVDQAGLSKYTRLELRRGAGAYICGEESAMIES
                     IEGKRGLPRHRPPYVAQVGLFGRPTLEQNVETLFWIRDILEKGADWFTSHGRRDRKGL
                     RSFSVSGRVKNPGVKLAPAGVSARELIDEYSGGMTDGHAFKAYLPGGASGGILPASMA
                     DLPLDFGTLEPYGCFVGSHAVVILSDRDDIKAVALNLMKFFEDESCGQCTPCRAGTEK
                     AAKLMAAGPWNEALLTELSNAMRDASICGLGQAAPNPLMSVLKYFPEELKTPLRSW"
     gene            complement(8921..>10196)
                     /locus_tag="VLJ17_05740"
     CDS             complement(8921..>10196)
                     /locus_tag="VLJ17_05740"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009759768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004329 - formate-tetrahydrofolate ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HSV22516.1"
                     /translation="ITSAHNLLSALIDNHIYWGNSLGLDSRRVAWRRVVDMNDRALRE
                     IVCSLGGVANGYPRESGFDITVASEVMAIFCLARDLNDLKHRLGNVIIGYTRERKPVR
                     AADLRAHGAMTALLKDALAPNLVQTLEGTPAFVHGGPFANIAHGCNSVLATTTALKLT
                     DYVVTEAGFGADLGGEKFIDIKCRKTGLAPDCVVLVATIRALKMHGGVKKEDLKSENL
                     AALESGLSNLARHVENVQKFGLVPVISINRFSADTSAEIELVKKACASHGVEALMADH
                     WAMGGEGAADVAKAVVRTIDSGRSKLKLLYPDEMPLLEKVRTIAREIYRAKDVSADKS
                     VRDQLASFEAMGYGKLPVCIAKTQYSFSTNADVKGAPTDHMVPVREVRLSAGAEFIVA
                     ICGDVMTMPGLPKVPAADSIDIGPDGKIVGLF"
BASE COUNT         1950 a         3124 c         3159 g         1963 t
ORIGIN      
        1 agcgcggtgg tgccgacctt gatcgcccag aaatggttct tgccgaaaat cggcgttgcg
       61 aagcaggaga tctgacatgt tcaccgcgtc gtggtcgcaa atgatggatc gtaaggtggc
      121 ttcaaggcac tcgccatcgg gtgcgaactc gccaaacgcg acggcgccgc actgcacatg
      181 atctcatgga actgcccgac tttccggcat cgatcgacga gatcgtcgag atcaaggatg
      241 ccgaaaaccg caagtatcac gatgtgctcg aacgtgcgcg cgggatcgcc aaggcaagta
      301 atatcgatct taatgccgcg cattatcggc ggaaccgcgg accgcctggt gcgcctcgcg
      361 tcctgcccgg tgcttgttgt caagtgatag gcggcgcctc accgcatcga cacaaggccg
      421 agcttgtcga agagcgcgat gtcgtgctgg cgttcgggat tcggcgtggt gagcagcttc
      481 gggccgtaga agatcgagtt tgcgccggcc aggaagcaca gcgcctgggt ttcttcgcgc
      541 atgtcctcgc ggccagccga gagccgcacc accgaggccg gcatggcgat gcgggcggcc
      601 gcgatggtgc gcacgaattc gagcggttcg agtgtattct ggttctcgag cggcgtgccc
      661 tcgacgcgga ccaacagatt gatcggcact gattccgggt gcgccgggag gctcgccagt
      721 gcggcgatca tgccgatgcg atcatggcgt ccctcgccca tgccgacaat gccaccgcag
      781 caaacgtgaa tgccagcggc gcgtacatga ccgagggtgt cgaggcgatc ctgataaacg
      841 cgggtcgaga tgatctcgcc gtaaaactcc ggcgaggtgt cgaggttgtg gttgtaatag
      901 tcgaggccgg cggccttcaa tcgcgccgcc tgtgccgccg tgagcatgcc gagcgtcgcg
      961 caggtttcaa gtccaagcgc tctgacgcct tccaccatgg cgcagatctg atcaagatcg
     1021 cgatccttgg gcgaccgcca tgccgccccc atgcaaaagc gacgcgcgcc cgcggctttt
     1081 gcaacgcgcg cctcgtccac caccgcgctc acctccatca atttatcggc cttcacgctg
     1141 gcgtggtggc gggcgctttg cgggcaatac gcgcagtctt ccgggcagcc gccggtctta
     1201 atcgacaaca gggtcgaaat ctgcacctcg cgcggatcaa agttcaagcg gtggatgcgc
     1261 tgggcgtgaa agatgagatc cgggaacggc aggtcgaaca gcgcctggac ctcggtccgg
     1321 gtccagtcgc ggcgaaccgc accggagagg caacgggcga ggatcggatc ggccactggt
     1381 atcggcgaat gggtgcggtc atccatagcc cgaccatggg ggcgccgacg aggaaatgca
     1441 agctgtcgac gtttgatccg atttggacca cccgaaagcc ggtcagaggg tacctcgacg
     1501 ccgccgaacg tcgtggcgac tctcgcgggc tcgcggctta caaacggctt gcttccttgc
     1561 gccttcgcta gaagaagggc gtcggcaata tccaccccgc gagttatcca gccgagcgcc
     1621 gttgcgatca acgccgcatc ctttaaagat cacgctcggc aagccgtctg cgccgaaggc
     1681 tctgcgcccg gcctcagacg aaggagccag agcggaatcg aatgatccgg gaccgtcatt
     1741 ttcagccgcc ggcttcgcta tcgatggatt acccgatcac atcattcgct gttgtgtcgc
     1801 atgacgacgt cgcgactgag gtaggccgtg acaaagttca gatcgatctc ggcggctcga
     1861 ctgaaatcgg cgagcgctcg atcacggcgc cccttttcag accagaccac gccgcgttcg
     1921 cagtagagat tggcgctacc aaagctaaat cggatcgccc gatccaaatc gacgagtgcc
     1981 ttatccagtg ccccctggcg ccgccacagg attgcccggt cacgaaatac ggccgggtta
     2041 ttcggatcaa tgcggatcgc ctgatcatag tcagcgagcg cgctctcgaa ggcgcctatt
     2101 tcgtcgaaag cattgccgcg gatattgtag gctttcacgt cattgggatc gagccgaata
     2161 gcctcatcga gttcgatgat cgcattgggg aaatcaccgc tgcggtatgc ggcgattgcg
     2221 cgctttctat agaaatcgac atcgcgcgat acgacttcgg gcgcgggcgc ccccccaagg
     2281 gcttctggtt cgtctcggtg cgctgggttg gtcggcacca tcaattgggc gcccgtcgtc
     2341 tcgtcgggtc cgcgcgcgtt gtccatgtct gcgatcagcg caatgacggc ggtcgtgggc
     2401 aagggcgcaa gcagcccata tccgccgacc agcgccgcta tgacggcaac cgcgacggtg
     2461 gtgcgcgtcg tcttcgacca atgtcgccca cgcttgagct gctgcagttg atcataggtc
     2521 gccggcggct ttacctcgcg aaggttggaa tgctgcagca gctcatcgta gaccgcccgc
     2581 tgctctgcat cgcgaaggat ggaattcgcg gcgacaatct gcctgaatcg aaaaggagca
     2641 tccgggtctt cgggatggag gtcaggatga tacgccctgg ctgcgctacg gaacgctttc
     2701 ttaagagccg cagcgtcgtc accagcccgc gcaccgatca gatcgtagag cgttttcttc
     2761 ggcgcgcctt ctagacagcc gtccgccccc ccacggcaag ttcccggttc acggcgtgcg
     2821 cgttgcagaa ctgatttcca atgagatgcc actttgactg gcgcgtttcc ggtcgagaaa
     2881 cacgcgccaa gccaagattt caaattggct cgccgccgaa ctatcatgca aggtcgggct
     2941 gcagttacac gcttttcacg gttgtgagcg cgtagctcgc cccgtctctc ttgatcttgg
     3001 ccagtgccgg ccaggggaag tgagcgccgc agatcatcat cccatcggca accacccgat
     3061 cgagcagctt gcggcgcgag gcctcggcca gcgcgccatc ttggtcaaag gctccgtgcc
     3121 actgcggatg cgtgaagcta aatgcgggta cgtatgcggc atcattggaa aacatcaact
     3181 gttctttgcc agaggtgagg tggaaggcgg tgtggccagc cgtgtgtccg ggtgccttga
     3241 caaagtaaat gccgggcacc acctcgtctt caccctcaac cggaagcacg ttcttccagt
     3301 tcggaatgac ggtctggatg cgctgtgcca gtggccggcg ccactcaggc aaccggccgg
     3361 tgagcgatgg atcggtccac cacttgtatt cggcagccgg cacaatgatc tccgcgttgg
     3421 ggaagaccgg tgcattggtg cctttctcaa gcagtccgaa gatgtgatcg ggatggaagt
     3481 gcgagaccaa gatcgtctcg atcttgtttg gatcaattcc ggcagccttc atgttgacca
     3541 tcagcttgcc ggaaacgaaa acagaatctg gattgaaggc ctgcacttgg ttgccgcctc
     3601 cagagtcaca cattatgagc ttgccgttca acttaacgac gaacaccgta atcgggattg
     3661 gcacgaacgc ggtggtgagc ccggcagcgg ccagggcttg tttgacctca gcaacggtga
     3721 cgttgctgct gccgaagtat ttcggatcat gcgccttttc ccaaatgccg tcatacaagg
     3781 tcgtgatttc agcatctccg accttatatc gaatatagcc tggcttcgga tccggcgtgc
     3841 gctgggttcg caccggcggc gttaaggcca agcttttgtc caaaccaagc gcggctccgg
     3901 ccacggccgc cgatagaaca aagtctcgac gcgatgttgt agacattttg atcccccatg
     3961 aaagttccca ctcagcgatc atttaatcgc gaattcctct tgttagcttc aggtattgac
     4021 agtgttgttt cgacagcttt atggcaaacg taaaagattg tgcctgtaag caaataaaat
     4081 aaaacaacca gaactagcat aatctggaaa aatatttctg aatctaaagt atttgcaatc
     4141 ggttctataa aatcaccaac tcaaggtagt aatgatgcgc acggggaatt gcgatttatg
     4201 ccgtgtggtg gaatggtgag caaagcaaga tccccgcgag acacgtcagc agcaagctac
     4261 tgatgtgtct tgcgagaact caacccatcc ttgctacaca gaactttatt ccgccgcctc
     4321 acgcgctgcg acgcgctcca accgggcggc gcaatacttg aattccggaa tcttcccgaa
     4381 cggatcaagc gccggattgg tcagcaggtt ggcggccgcc tccacaaagg cgaagggaat
     4441 gaacaccaca ccgtccggaa taccgtcgtc ctggcggact gcaagttcta cggtgccgcg
     4501 gcgggtcgta acccgcacca tgtcgccggg cgcaatgccc aggcgggcga tctccccgcg
     4561 cgatagcgag gcgaccgctg cgggctcgat cgcatcgagc acgctcgccc gccgcgtcat
     4621 cgcgccggtg tgccagtgct cgagctggcg gccggtggtg agcaccattg ggtattcggc
     4681 gtcgggcacc tcgttggggg gcgagagctt ggccgccacc agcttgccga agccgccggg
     4741 gcgcggaaac cccttgtcga aaacgacatc gtgccccggt ttatccggcg cgtcgctcgg
     4801 atacgtgacg gcgtcctcgc gggcgatgcg atcccaagaa atgttatcga gcgacggcat
     4861 cagcgaggcc atctcggtat agacctcgct cggatgcgtg tagttccacg caagcccgat
     4921 ccggcgcgcg atctcctgga tgatccacca gtcgagcttg gcgtcgcccg gcagcggcag
     4981 cgcctgtcgg cccatctgga cttggcggtt ggtgttggtg accgtgccgt ccttttcggg
     5041 ccaggcggag gccggcagga tcacgtccgc ataggcggcc gtctcggtga ggaagaggtc
     5101 ctggaccacc agatgatcga gatgtgccag cgcctcgcgg gcatggttga gatcagggtc
     5161 tgacatcgcc gggttttcgc ccatgatgta catgcccttg atctcgtcgc gatgcaccgc
     5221 gtccataatc tcgaccacgg tcaggccgcg cttgggatcg agcgtggtgc cccacacgga
     5281 ctcgtacttg gcgcgggtgt tgggatcctc cacggactgg tagtccggaa agaacatcgg
     5341 aatgagcccg gcgtccgacg cgccctgcac gttattctgg ccgcgcagcg gatgcaggcc
     5401 tgtgccgggc cggccgacat ggccgcagat cagtgacagc gcgatcaggc agcgcgcatt
     5461 gtcggtaccg tgggtgtgct gcgacacacc catcccccag aagatgatgg cggattgggc
     5521 gcgcgcatag gtgcgcgcca cggtgcgcag agtgtcggcg tcgaggccgc agattggcgc
     5581 catctgctcc ggcgtgaagt cccggatatg ctcggcgagc tgcgggaagc cctccgtgaa
     5641 ggtctgcaca tattgctggt cgtagagctt ctcggtgatg atcacgttga gaagcgcgtt
     5701 gagcatcgct acgtcggcgc cgttgcggaa ttgcagcata tgggtggcgt ggcgcttgag
     5761 cgcttggccg cgcgggtcca tcacaatgag cttggcgccg cgcttggcgg cctgcttgaa
     5821 gaaggtggcg gcgaccgggt gattttccgt cgggttggcg ccgatcacga cgatgacgtc
     5881 agagttccgg cattcgttga acgtcgccgt cacagcggcg gagccgacgc cctccatcag
     5941 ggctgcgacc gacgaggcat ggcagagccg cgtgcagtgg tcgacgttgt tggatccgaa
     6001 gccggtgcgg accagcttct ggaacagata ggcctcctcg ttcgacccct tggccgagcc
     6061 aaaacccgca agcgcacgcg caccgtgcgt atcgcggatg cgcttgaggc cggcggcggc
     6121 gcggttgagc gcctcctccc aggtggcgag ccggaaatgg gtccagggat ttcgcggatc
     6181 gacggtatcg tcgacctgct tcggaacgcc gtcgcggcgg atcatcggcc gggtgaggcg
     6241 ctccggattg tggacgtaat cgaagccgaa ccgacctttt acacacagcc ggttatggtt
     6301 ggccgggccg tccttgccgg tcacatagag cagcttgtcg tccttgatgt gataggtcag
     6361 ctggcagccg acgccgcaat aggggcacac cgaattgact tggcgatccg gataggcgcc
     6421 gcggacgttg tcgctgccga ccagggttga cggcatcaag gcgccagttg gacaagcctg
     6481 cacgcattcg ccgcaggcga cgcaggtgct cgcgcccatg ggatcgtcga aatcaaacac
     6541 gatcttttcg ccgtggccgc ggcccgccat cccgatgacg tcgttgacct ggacctcgcg
     6601 acaggcgcgc acgcacagat tgcattgaat gcaggcgtca agattgaccg ccatcgcggt
     6661 atggctgcga tcgggctgcg ggtgatgacg cttgggaaac cgcccgaccg agatccccat
     6721 gcggtcagcc caagaccaga acttcgagga cgggtcgtgt gccacggtgg cgcggtccgg
     6781 ctgatcggag atgagcaggt cgaaaaccat ctggcgcgcc gccttggcgc ggtccgatcc
     6841 ggtcgtcacc ttcatgccgt tggtgggctt gcggatgcag ctggccgcca gaaccctctc
     6901 gccctcgatc tccaccatgc aggcacggca gttgccgtcg gcgcggtatc cgggctcggg
     6961 cgcgtagcac agatgcggga tgtcggtgcc gagccggtgg gccacctgcc aaatggtctc
     7021 gcccgtgcca gcctcaacct cgcggccatc aagggtaaac ttcacagtcg aaggtttagc
     7081 ctcgatttta ctcatcacac cacctattgc gtcccatagg gtgggttgag ccttcggcca
     7141 ggttcactca acccatcaat tccgtgcgtt caccaacttc tgagcggcgt ctttagctcc
     7201 tcgggaaagt atttcagcac actcatcagc gggttcgggg ctgcctggcc gagaccgcaa
     7261 atcgaagcgt cgcgcatggc attcgatagc tcggtcaata acgcttcgtt ccacggaccg
     7321 gcggccatta gcttggcggc cttctcggtt ccggcacggc acggcgtgca ctgaccgcag
     7381 ctctcatcct cgaagaactt catcaggttg agagcgacgg ccttgatatc gtcccggtcc
     7441 gacagaatta caaccgcatg ggacccgaca aagcaaccat acggctccaa ggtgccgaaa
     7501 tcgagcggca ggtcagccat gctggcgggc aatatcccac cggacgcacc gcccggcaga
     7561 taggccttaa aggcatgccc atcggtcatg cccccgctgt attcgtcgat cagttcccgc
     7621 gcactgacgc ccgccggcgc cagcttgaca cccggattct tgacgcggcc cgaaaccgaa
     7681 aagctgcgca aacccttgcg gtcgcgccgg ccatgtgacg tgaaccagtc cgctcccttc
     7741 tcaaggatgt cgcggatcca gaacaatgtc tcgacgttct gttccaacgt cggtcggccg
     7801 aacaagccga cctgagcgac ataaggcggg cgatggcgtg gcaaaccgcg tttgccctcg
     7861 atcgattcga tcattgcaga ctcttcgccg cagatatagg cgccggcgcc gcggcgaagc
     7921 tcaagcctcg tgtacttcga cagtcccgct tggtcgacct tggcaagctc gtcattgagc
     7981 atcaggcgga tttccgggta ttcgtcacgc agatagatgt aagcctcggc ggcctccacc
     8041 acccaggcgg cgaccaacat gccctcgata aaacggtgcg gatcgcgctc cagatagtag
     8101 cgatctttga aggtgccggg ctcgccctcg tcggcattga cagccatcag ccggggcgcg
     8161 ggctcggccc gcaccagggt ccacttgcgg ccagtcggga aaccggcgcc gccgagccca
     8221 cgcaggccgg catcgctcac tgccttgatg atgtcgtcgc gactgcgctg accgccaaga
     8281 catgacctca agagggcata gccgccggcc gcctgatagg ccgtaaagtc cttgctgggc
     8341 ttgtatgcat gggcatgggc gttgacgccg accgcagcgg cgattttttc agcatctgcc
     8401 tgcatcacct gtacatggcc gatggcggcc actggagcgc gatcgcaggc ccccatgcac
     8461 ggcgcgcgca gcatccgaac atccgtgtcc agctttcccg gcaacgccgc aatcagcctt
     8521 tcggcgcccg ccatggcgca ggacagactg tcgcaaaccc ggaccgtaac ggcgggaggc
     8581 gcagggccgt ccttaaccac atcaaaatga gcgtagaagg tcgcgacctc atagacctca
     8641 gcctgggcga gcttcatctc gtccgccagc gccgcgagat gcgaggccga aatgtggccg
     8701 tagtgatcct ggatcaagtg gaggaattcg atcaggagat cgcgccggcg cgcacgagtg
     8761 ccgagcagcg ccttgacctc gccaagcgcc tgtggatcgg tctgccgacc tttgggtgtt
     8821 tgccgcggcc ggcgccgtga cgtctggggt ttttccgtcg tcatgttcat tggggaagcc
     8881 atcacgagat catgcagaac tcgagccagc tccatcgtgt ttagaacagc ccgacgatct
     8941 taccgtccgg gccgatgtcg atggaatcgg cagccggtac cttgggcaag cccggcatgg
     9001 tcataacgtc gccgcagatc gcaacgatga actccgctcc tgccgacagc cgtacctcgc
     9061 gaaccgggac catgtggtcg gtcggcgcac ccttgacgtc cgcgttggtg gagaagctgt
     9121 actgggtctt ggcgatgcag accgggagct tgccgtagcc catggcctca aaggacgcga
     9181 gttgatcgcg caccgatttg tcggcggaca cgtcctttgc acgataaatt tcccgggcaa
     9241 tggtgcggac tttttccaac aggggcattt catccggata gagcaacttg agcttgctcc
     9301 tgccggaatc gatggtgcgc accacggctt ttgccacgtc ggcggcgcct tcgccgccca
     9361 tggcccaatg gtcggccatc agagcctcga ccccgtgcga tgcgcaggct ttcttgacga
     9421 gctcgatctc agcagaggta tcggcagaaa accggttgat ggaaatcacc ggaacgagac
     9481 cgaatttttg cacgttctcc acatggcgtg caagattcga gaggccggac tcgagcgctg
     9541 ccaagttttc gctcttgagg tcctccttct tcacgccgcc atgcatcttt agcgcccgga
     9601 tggtggccac cagcaccacg cagtctggcg caagcccggt cttgcggcac ttgatgtcga
     9661 taaatttctc gccgccgagg tcagccccga agccggcctc cgtgaccaca taatcggtga
     9721 gcttaagcgc tgtcgtggtc gccagcaccg aattacaacc atgggcgatg ttggcgaacg
     9781 ggccgccatg aacgaacgcg ggtgtaccct ccagggtttg gacgaggttc ggagccagcg
     9841 cgtccttgag cagcgccgtc atggcgccat gcgccctaag atcggctgcc cgcaccggct
     9901 tgcgctcgcg cgtataaccg atgatgacat ttccgagccg atgcttgaga tcgttgagat
     9961 cgcgggcgag gcagaaaatc gccattacct ccgacgccac cgtgatgtcg aagccggatt
    10021 cgcgcggata gccgttggcg acgccgccga gcgagcagac gatctcgcgc aacgcccgat
    10081 cgttcatgtc cacgacgcga cgccatgcga cgcgccggct gtcgaggccc agcgagtttc
    10141 cccagtagat gtggttgtcg atcagcgccg aaagcaggtt atgcgccgac gtgatg
//
LOCUS       DATILV010000246         1570 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4913933, whole genome shotgun sequence.
ACCESSION   DATILV010000246 DATILV010000000
VERSION     DATILV010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1570
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4913933"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(134..223)
                     /locus_tag="VLJ17_05745"
     tRNA            complement(134..223)
                     /locus_tag="VLJ17_05745"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(187..189),aa:Ser,seq:cga)
     gene            317..>1570
                     /locus_tag="VLJ17_05750"
     CDS             317..>1570
                     /locus_tag="VLJ17_05750"
                     /inference="COORDINATES: protein motif:HMM:NF024884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4118 domain-containing protein"
                     /protein_id="HSV22517.1"
                     /translation="MPAATRSIVSMAMDNSPVYDRIRKQLPGIFITLALVGVLTAILF
                     FLVWEIGLAHGSIVYLIPVVIAATRWGIVAALVAAVCGVLASAFFFYPPAYSFRVKDP
                     QEVIDLILFIFVAVAVSQLANRLKRQLEMARQREIDVRDLYAFSRRLAVAFDVSDIHA
                     AIEDHLASIMQRNVVLFASAREASDSSGRRAGMTVPQRVLSEVVEVASGHHDVVGGAI
                     VTAESGEIWLVRAVSPKSLEFGVIAINLGHESKERLNELRIRVDAVLADATATLERLG
                     VAHAISEARMRSQTDQLREALIGSVSHELRTPLASILGAATVLSAAPALRQEKKLTAL
                     VHDVRDEAERLNDDIQNLLDATRISSDGIKPHIEWADPSDIINSAVERCRHRLSDRRV
                     MVDVPPDLPLIHVDPILIQQALVQIF"
BASE COUNT          289 a          494 c          480 g          307 t
ORIGIN      
        1 gacgaacgcg ttagaatgcc gagtctgatt ctcaacgcgg gccgataggg cgcgcccgtg
       61 ggcacgcatc tggagaccgc cagcaatatg gcggcaaaca atctagcaaa gctatggctt
      121 tatcgcactt agatggcgga gagggaggga ttcgaacccc cgataccctt gcgagtatgc
      181 cgcatttcga gtgcggtgct ttcaaccact cagccacctc tccggagccc gaaaccggcc
      241 tttgcagggc cgggaacgga tggcgctatg tagccaagcg cgccaagaca gacaagggtc
      301 gcagggcgta tattggttgc cggcggcgac ccgtagcatc gtcagcatgg caatggacaa
      361 ctccccggta tacgaccgca tccgcaaaca gttgcccggc atattcatca ccctcgccct
      421 ggtcggggtg ctgaccgcga tattgttttt tctggtgtgg gagatcgggc tcgcgcacgg
      481 ttccattgtc tatctgattc cggttgtgat cgcggcgacg cgctggggca tcgtggcggc
      541 gctggttgcg gcggtttgcg gcgtcttggc ctccgccttt ttcttttatc cgccggccta
      601 cagtttccgc gtcaaggatc cgcaggaagt catcgacctg atcctgttca tcttcgttgc
      661 cgtcgcggtg agtcagctcg ccaatcgcct caagcggcaa ctggagatgg cccggcaacg
      721 ggaaatcgac gtgcgcgacc tctatgcctt ctcccgccgg ctggctgtcg cattcgatgt
      781 gtcggatatc cacgcggcca tcgaggacca tcttgccagc atcatgcagc gcaacgtggt
      841 tctgtttgcc agtgcgcgcg aagcgtccga cagcagcggc cggcgtgccg gcatgacggt
      901 gccgcaacgg gttctgtccg aagtcgtcga ggtcgcctcg ggccatcatg acgtcgttgg
      961 cggcgcgatc gtcaccgccg aaagcggcga gatctggctc gttcgcgcgg tgtctccgaa
     1021 gagcctcgaa ttcggcgtga tcgccatcaa tctcggccac gaatcaaaag aacgcctgaa
     1081 cgagttgcga atccgcgtcg acgcggtgct ggccgacgcc accgcaacac tggagcgcct
     1141 cggcgtcgcc cacgccatca gcgaagcgcg catgcgttcg cagacggatc agttgcgcga
     1201 ggccctgatc ggatcggtga gccacgagct gcgcacgccc ctcgcttcta tcctcggcgc
     1261 cgccacggtt ctgagtgccg cgccggcgct gcgccaggaa aagaaactga ctgcactcgt
     1321 gcacgacgtg cgtgacgaag cggagcgcct caacgacgac atccagaacc tgctggacgc
     1381 cacacgcatc agcagcgacg gcatcaagcc tcatatcgaa tgggcggacc cttccgacat
     1441 catcaactcg gcggttgagc gctgccgtca tcgcctttcg gaccggcgtg tcatggtaga
     1501 cgtgccaccg gatctgccac tgattcacgt cgatccgatt ctgattcaac aggcgctggt
     1561 gcagattttc
//
LOCUS       DATILV010000247         2700 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1081335, whole genome shotgun sequence.
ACCESSION   DATILV010000247 DATILV010000000
VERSION     DATILV010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2700
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1081335"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            137..1699
                     /locus_tag="VLJ17_05755"
     CDS             137..1699
                     /locus_tag="VLJ17_05755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007601864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISL3 family transposase"
                     /protein_id="HSV22518.1"
                     /translation="MHQSNRYRALVPVGLIIERVDFGVDYIGIVARSAAKSCACPRCG
                     KLSSRVHSRYQRSLADLPAHGKAVRISVIARRFRCQEQLCRTRIFTERLDRGIALSSA
                     RRTVRLECIVRHLGLALGGRPAASLARRLMLPVSKDTLLRVVRRSVVRRDTPLNVIGI
                     DDWAWKRGHRYGTLICDLERRRIVDLLPDRETATAEAWLAAHPSITVVARDRGGGYSR
                     AAERALPGAVQVADRWHLMENASSAFLLAVRKSLQTIRQALGTTMIDVTLLTKAELRQ
                     YEGFLRRQEANAVIRALADMGTPIKEIVRRTGHSRQTIRQVVRGGGARTDAFRSRMSS
                     LEPYLARLDADWSTGCHNGAELWRRLKAEGFRGGLRVVTEWATRRRRSESNPTGRPNK
                     IPSARTIAHLMTFGRDRLSKDEAITVATIEGAVPALVAARDRIDQFHAMIRRRATIHL
                     DEWISCAADGLLSSFATGISTDRQAVAAAITEPWSNGQTEGQITKLKLVKRQMYGRGK
                     LDLLRARLLGAA"
     gene            complement(1804..2694)
                     /gene="phhA"
                     /locus_tag="VLJ17_05760"
     CDS             complement(1804..2694)
                     /gene="phhA"
                     /locus_tag="VLJ17_05760"
                     /EC_number="1.14.16.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014890476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004505 - phenylalanine 4-monooxygenase
                     activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine 4-monooxygenase"
                     /protein_id="HSV22519.1"
                     /translation="MSVTVEDRAIDSKSKNRYRDAPRNPDYTIDQDWSSYSAAEHDRW
                     DRLFKRSQAVLHDRACDEFIAMMDTLKLSESGIPNMERLSDRLEKITGWRVVPVAELV
                     PDEVFFNLLANRRFPAGAFIRSEQEMDYLDEPDVFHDVFGHVPLLANPVYSNFMQAYG
                     KGGQRAISLGRLANLARLYWYTVEFGLIRTAAGLRIFGAGIMSSTTESVFALESDSPN
                     RIAFELERVMRTKYLIDDFQQTYFVIESFEKLLDDCYQDFAPIYEGIGMATDIGAHEV
                     LVGDDVVTRGTLAYFRKKSA"
BASE COUNT          552 a          793 c          815 g          540 t
ORIGIN      
        1 tctgttgaca acggacataa gaggcttctc agcgcttcag agttttgagc atggacaggt
       61 caaaattggg ctctgactca cttttggtgc agtttcgatt gaggttggca ggcgttctcg
      121 aatcgggggc gttgccatgc atcaatccaa tcgctatcgg gcgctggtcc cagtcggtct
      181 gattatcgaa cgtgtagact tcggggtcga ttacatcggt attgtcgcgc gatcggcggc
      241 aaaatcgtgt gcgtgcccaa ggtgcggaaa gctgtcatcg cgagttcaca gtcgctatca
      301 acgatcatta gcggacttgc cagcgcacgg gaaagcggtc cggatcagcg tgatcgcgcg
      361 gcgcttccga tgtcaggagc agctctgccg gacacgaatc ttcaccgagc gcctcgatag
      421 gggcattgcg ctgtcctctg ctcgacgcac ggtgcggctt gaatgcatcg ttcgtcatct
      481 tggtcttgcc cttgggggcc gcccggcagc aagccttgcc cgccgactga tgctgccggt
      541 gagcaaggac actttgctcc gtgtcgttcg tcgtagcgtg gtgcgtcgag acacgccgct
      601 gaatgtgatc ggcatcgatg actgggcctg gaaacgagga catcgctatg gaacgctaat
      661 ctgcgatttg gagcggcggc ggatcgtgga tcttttgccg gatcgcgaga ctgcaaccgc
      721 ggaagcgtgg ctagccgccc atcccagcat cacggtagtg gcgcgtgatc gtggtggcgg
      781 ctatagccgg gccgccgaac gagctttgcc gggtgccgtt caggtcgctg atcgctggca
      841 cctgatggaa aacgccagtt cggctttcct ccttgccgtg cgcaagtccc tacagacaat
      901 tcggcaagcg ctcgggacaa cgatgattga cgtcacacta ctgacgaagg ccgaactgcg
      961 ccaatacgaa ggatttctgc gacgccaaga ggcgaacgca gtcatccgtg ctctcgccga
     1021 tatgggaacg ccgatcaagg agatcgtccg gcgaactggc catagccgcc aaaccattcg
     1081 ccaagtcgtt cgcggtggtg gcgcccggac cgatgcgttc cgctctagga tgagttcgct
     1141 ggaaccttat ctcgcgagac ttgacgccga ttggagcacg ggctgccaca acggggcgga
     1201 gctgtggcgg cgcctcaaag ccgaaggctt tcgtggcggc ctgcgggtgg tgacggagtg
     1261 ggcaacgcgc cgtcgccgca gcgaaagcaa cccgaccggg cggccaaata agattccttc
     1321 ggccagaacc atcgcgcatc tcatgacctt cgggcgcgat cgactgtcca aggacgaggc
     1381 aatcaccgtc gcgacgatcg aaggggcggt gccggcgctg gtggctgccc gcgatcgcat
     1441 cgaccagttt catgccatga tccgaaggcg cgccacgatc catcttgacg aatggatttc
     1501 gtgcgccgct gacggcctac tttcaagctt cgccacagga atcagcactg atcgacaggc
     1561 agtcgccgcg gcaatcacag aaccttggtc caacggccag accgaagggc agatcaccaa
     1621 gctcaaactc gtcaagcggc aaatgtacgg ccgcggtaag ctcgacctcc ttcgggcgcg
     1681 actgctcggt gccgcatgaa acgtcggagc tgcaccaaaa gtgagtcaga gcccaaattt
     1741 ggaagccgat ttgacagctg cacaccacgc aatccgccat gccctaatgc attctgccag
     1801 tccctacgca ctttttttcc tgaagtacgc gagagtgcct ctcgtaacca catcgtcgcc
     1861 gactaagact tcatgtgctc cgatgtcggt tgccatcccg attccttcat agatcggagc
     1921 aaaatcctga tagcaatcgt ccagcagctt ttcgaagctc tcgatcacga aataggtctg
     1981 ctggaaatcg tcgatcagat atttggtgcg catgacgcgt tcgagctcga aggcaatccg
     2041 attgggcgag tcgctttcga gcgcgaagac gctttccgtg gtggacgaca tgattccggc
     2101 gccgaagatg cgcaagccgg ccgccgttcg gatcaacccg aattcgaccg tgtaccagta
     2161 gagccgcgcc agattcgcca gccggccgag cgagatcgca cgctggccgc ccttgccata
     2221 ggcctgcatg aaattcgaat agaccgggtt cgccaggagc ggcacgtggc cgaaaacatc
     2281 gtggaagacg tccggctcat cgagataatc catctcctgc tccgagcgga tgaaggctcc
     2341 ggccggaaat cgtcggttcg ccaggagatt gaagaaaacc tcgtcgggaa cgagctcggc
     2401 gaccggaacg acgcgccaac cggtgatctt ttcgagccga tcgctcaacc gttccatgtt
     2461 ggggatgcca gattcggaga gcttgagcgt gtccatcatc gcgatgaact catcgcaggc
     2521 gcggtcgtgt agcacggcct gcgatcgctt gaacagacga tcccaacgat cgtgctccgc
     2581 ggccgaatag gacgaccagt cctggtcgat ggtgtaatcc ggattgcgcg gcgcgtcgcg
     2641 gtaccgattc ttcgacttcg aatcgatggc tctgtcctcg accgtgactg acatgctcct
//
LOCUS       DATILV010000248         4773 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_570021, whole genome shotgun sequence.
ACCESSION   DATILV010000248 DATILV010000000
VERSION     DATILV010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4773
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_570021"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1958)
                     /locus_tag="VLJ17_05765"
     CDS             complement(<1..1958)
                     /locus_tag="VLJ17_05765"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HSV22520.1"
                     /translation="MDRTYRVNSLIGSPIERIEDLRFLRGRGQYVDDVSPPGLLHAVI
                     LRSAVAHGRIRGIDTTLALARPGVCTIITAADIGDVPTIPLRQERLAAFKPFEQPVIA
                     IGKVRYVGEPVAVVVADTVAHAEDAADAVAIDIEESPVVADCGVADSLRTTLFETTSN
                     LAGTLTAVKGDADAAFRTAAYLRREHFKVQRHTAVPMEPRGLLAQWHDGQLTLFGAAK
                     VPFPNRRILAGQLGVPEAAVHMVENDVGGGFGGRGEFYPEDFLIPFVARFLGRPVKWI
                     EDRREHLIAANHARDVACMLEIACNRDGTILALRGRALVDVGAYIRTNGATGARNTAQ
                     ILSGPYRVPNIHMEVSLHVTNKTPVGTYRGPGRFEADFFRERLFDMAAGDLGIDRAEF
                     RRRNVIAEPEMPYALAKVVELDLDTATDSGDYRITLERCLAEIGWADKASLQGKQIDG
                     RYHGLAIGCYFEGGASGPSEHARLVLNTDGTVSVHVGSSANGQGLETAFSQIAADALE
                     IPIERIRGVLHGSTDLLREGIGTYSSRSIVMGGSAIVVAAEKLRATIRAAAARHLGCD
                     AKDVEIVEGGAQALGKSVSLAELAQEATRAGTDRRQDFFYPPCGDGEDGISADGTYAS
                     LHRTYSYGAHAAHVAVDPRTGQVEVIDYV"
     gene            complement(1998..3086)
                     /locus_tag="VLJ17_05770"
     CDS             complement(1998..3086)
                     /locus_tag="VLJ17_05770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV22521.1"
                     /translation="MRAHPVLSRWERREERAFAHPASAFRLTIYLAAVGIISPYGGHK
                     MRRIFAAAIVLMVSAAAHSQDWPQHAVTVVVPFGPGGSADLMGRILSTHLQTRFGVSF
                     VVDNKGGAGGSIGTGFVAKAANDGYTLLVGTVSSHAINAALYTKLAYDLDRDFQPVSL
                     LVRFPNLLIVSPKIPVASVAGLIDYLKANPGKVNYGSSGIGTSSHLSVVMFAHATGTE
                     MTHIPFRSTGEVVNSMIGGYVDLGIDSMTTTIPHARSGTVRALAVTTPQRNASIPDLP
                     TIAETLPGYEAIAWQGLFAPAGTPRPIVDRLAMEVKRILETPDVAESLKALGAEPSPM
                     PPEAFAAFARTERAKWKEAVRVSGAHVD"
     gene            complement(3101..4276)
                     /locus_tag="VLJ17_05775"
     CDS             complement(3101..4276)
                     /locus_tag="VLJ17_05775"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSV22522.1"
                     /translation="MHLTSWPSSPHETSIRDAIARLCAPFDDAYWLAKDRAGGFPEDF
                     FQAFAASGWLGICIPQAYGGAQLGITEAAIMMQAVAQSGSGLSGASALHMNIFGLNPV
                     VKFGTAEQKARMLPSLAAGRDKACFAVTEPNAGLDTLKLKTRAERVGNNYVVSGQKIW
                     ISTAQVATKVLLLARTTPIDRVVKRTEGLSLFYTDLDRRYVDVREIEKMGRKAVDSNE
                     LFIDGLPVPLDDRIGEEGKGFELILHGMNPERILIGAEAVGLGRAALAKAVGYAGQRE
                     VFGRPIGRNQAIAHPLAACWMELEAANLMTFRAAALYDAGEPCAAEANAAKYLAAEAA
                     FKTCETAVVSHGGMGYAKEFHVERYLREALITRIAPVTPHMILNFIAEKVLGLPRSY"
     gene            4409..>4773
                     /locus_tag="VLJ17_05780"
     CDS             4409..>4773
                     /locus_tag="VLJ17_05780"
                     /inference="COORDINATES: protein motif:HMM:NF015862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HSV22523.1"
                     /translation="MSFRLAVAAAAGAMMIVPGVACAQVLMQRDVSLRMALTIAEAAL
                     AECGTTTSVAIVDRAGRLRVFLQGDNANPHNIELARRKAYTARTFRAPSAEWAKRTET
                     ANSGQRMLAEVIPLGGGMP"
BASE COUNT          885 a         1498 c         1503 g          887 t
ORIGIN      
        1 acatagtcga tcacctccac ctggccggtc cgggggtcga ccgccacatg ggcggcgtgg
       61 gcgccatagc tgtaagtgcg atggaggctc gcataggtgc cgtcagccga gattccgtct
      121 tctccgtccc cacaaggggg atagaagaag tcttggcgcc ggtccgtgcc tgctcgagtt
      181 gcttcttggg caagctccgc gagcgacact gatttgccaa gtgcctgcgc tccaccttcg
      241 acaatctcca catccttcgc gtcgcaaccg aggtggcgcg cggcagcggc gcggatcgtc
      301 gcgcgcaatt tctcggcggc gaccacaatg gctgagccgc ccatcacgat ggagcgcgaa
      361 ctgtaggttc cgattccttc tcggagcagg tcggtcgaac cgtgcaagac accgcggatg
      421 cgttctatcg gaatttcaag cgcgtctgcc gcaatctgcg agaacgcggt ttcaagccct
      481 tgcccgtttg ccgacgagcc gacatgaacc gagaccgtgc cgtctgtgtt gagcacgagc
      541 cgcgcatgct cgctggggcc cgaagcaccg ccctcgaaat aacagccgat cgccagccca
      601 tgatagcgcc cgtcgatttg cttgccttgt aacgatgctt tgtcggccca tccgatttcc
      661 gcaaggcacc tctccaaggt gatccggtaa tcgccgctgt ctgttgccgt atcgaggtca
      721 agctccacca ccttggcaag tgcatatggc atctcgggtt cggcgatgac attgcggcgc
      781 cggaactctg cgcgatcgat gccgaggtcg cccgccgcca tgtcgaacag gcgctcgcga
      841 aaaaaatcgg cctcgaagcg gccagggccg cgatatgtgc cgaccggtgt tttattggtg
      901 acgtggagtg acacctccat gtggatgttg ggtacgcgat atgggccgga caggatttgc
      961 gcggtgttgc gtgctccggt tgccccgttg gtgcggatat aggcgcccac gtcgactaag
     1021 gcgcggccgc gcagcgccag gatcgtaccg tcgcggttgc aggcgatttc gagcatgcag
     1081 gcaacgtcgc gggcgtgatt ggcggcaata agatgctcgc gccggtcttc gatccatttc
     1141 accggacggc cgaggaatcg cgccacgaaa ggaatgagaa aatcctccgg atagaactcg
     1201 ccgcgccccc cgaaaccgcc gccgacatcg ttttcgacca tgtggacagc ggcttccgga
     1261 acgcccagtt gacccgccaa aatgcggcga ttgggaaacg gcaccttggc ggcaccaaac
     1321 aaggttagtt gcccatcgtg ccattgcgcc aagagtccgc gaggttccat cggcaccgcg
     1381 gtgtggcgct gcaccttgaa gtgttcgcgg cgcagatagg cggcggtccg gaacgccgcg
     1441 tcggcgtcgc ccttcaccgc ggtcagcgtg ccggcgaggt tggaggtggt ttcgaacaac
     1501 gtggttcgca ggctatcggc gaccccgcaa tccgcaacaa ccggcgattc ttcgatatcg
     1561 atcgccacag cgtccgcggc gtcttcggcg tgggcgacgg tatccgccac cacgacggca
     1621 accggttcgc ccacatacct caccttgccg atcgcaatta ccggctgctc gaatggcttg
     1681 aaagcagcaa gccgctcttg ccgcagcggg atggttggga catcgccgat gtcggccgcc
     1741 gtgatgatgg tacacacgcc cggtcgtgcc agcgccaacg tggtatcgat tccgcgaatg
     1801 cggccatggg caacggcgct gcgcaagatc acggcgtgca gcaatccggg tgggctcaca
     1861 tcgtccacat actggcccct gccgcgaaga aagcgcaggt cctcgatgcg ttcgatcggg
     1921 ctgccgatca acgaattaac ccggtaggtg cgatccacgg tcataagacg tgcgtgttta
     1981 cgtgacgctg agtgacttca atcgacgtgc gcccccgaaa ccctcacggc ctccttccac
     2041 ttggcacgct cggtgcgggc aaacgccgca aatgcctcgg gcggcatagg gctcggttcg
     2101 gcgccgagcg ctttgagtga ttcggccacg tcaggcgttt cgagaatacg cttcacctcc
     2161 atcgcgagcc ggtcaacgat cggccgcggt gtgccggccg gcgcgaacag gccctgccac
     2221 gcgatggcct cgtagcccgg cagtgtttcc gcgatagtgg ggaggtccgg tattgatgcg
     2281 ttgcgctgcg gcgtcgtcac tgccaatgct cgtaccgtac ccgagcgggc atgcgggatt
     2341 gtggtcgtca tgctgtcgat gccgagatcg acgtagccgc cgatcatgct gttcaccact
     2401 tcgccggtgc tgcggaacgg aatatgcgtc atctcggttc cagtcgcgtg cgcgaacatc
     2461 accacagaga gatgcgacga agtgccaatg ccggaggagc cgtaattcac cttgccggga
     2521 ttggctttga ggtaatcgat gagcccggcc accgatgcga ccggaatttt cgggctgaca
     2581 atcaacagat tgggaaaccg caccagtagc gacaccggct gaaaatcgcg atcgagatcg
     2641 taggcgagct tggtgtagag cgccgcattg atcgcgtgcg agctgacggt accgaccagc
     2701 agcgtgtagc cgtcgttcgc tgccttggcg acgaagcccg ttccgatgct gccgccggcg
     2761 ccgcccttgt tgtcgaccac gaacgacacg ccgaaccggg tctgcaggtg agtagagagg
     2821 atgcgcccca tcagatcggc ggagccgccg gggccgaatg gcaccactac cgtgaccgcg
     2881 tgctgcggcc agtcctgcga atgcgctgcg gccgagacca tgagcacaat cgccgcggca
     2941 aagatgcgtc gcatcttatg tcctccgtaa ggcgagatga taccaacagc ggcaaggtag
     3001 atcgtcaatc gaaatgcgct tgcagggtgg gcaaaggcgc gctcttcgcg ccgttcccac
     3061 ctcgacagca cagggtgagc ccgcatcgat ttgcctccac tcaatacgac cgcggcaacc
     3121 ccagcacctt ctcggcgatg aaattcagga tcatgtgcgg cgtcaccgga gcgatccgcg
     3181 tgatcagagc ttcgcgcagg tagcgctcga catgaaattc cttggcatag cccatgccgc
     3241 catggctcac gacggcggtt tcgcaggtct tgaacgcagc ctcggcggcg agatacttcg
     3301 cggcattggc ttcggccgcg cagggctcgc ccgcgtcgta aagtgccgcc gcccgaaatg
     3361 tcatcagatt ggcggcttcc aactccatcc agcaggccgc gagcggatgt gcgatcgcct
     3421 ggttgcgccc gatcggtcgg ccgaacacct cgcgctggcc cgcatagccg acggctttgg
     3481 cgagcgctgc gcgcccgagc ccgaccgcct cggcgccgat caggatgcgc tccggattca
     3541 tgccgtggag aatgagttcg aaacctttac cctcctcgcc gatgcgatcg tcgagcggca
     3601 ccggcaggcc gtcgatgaaa agctcgttgg aatcgaccgc cttgcgcccc atcttttcga
     3661 tctcgcgcac gtcgacataa cgccggtcga ggtcggtata gaataggctg aggccttcgg
     3721 tgcgcttgac gacccgatca atcggggtgg tgcgcgccaa cagcagcacc ttggtggcaa
     3781 cctgcgcggt ggagatccag attttttggc ccgacaccac ataattgttg ccgacgcgct
     3841 cggcgcgggt tttcagcttg agggtgtcga gcccggcatt gggctcggtg accgcaaagc
     3901 acgccttgtc gcgaccggcg gccagcgacg gcagcatgcg ggccttctgc tctgcagtgc
     3961 cgaatttcac gaccgggttg aggccaaaaa tattcatatg cagggccgac gctccggaaa
     4021 gtccgctgcc ggattgtgca accgcctgca tcatgatggc ggcctcggta atgcctagtt
     4081 gcgcgccccc gtaggcttgc ggaatgcaga tgccaagcca gcccgacgcc gcgaaggctt
     4141 ggaagaaatc ttccggaaat ccgcctgctc gatccttggc aagccaatag gcgtcgtcga
     4201 agggcgcaca cagccgtgcg attgcatcgc ggatcgacgt ctcatgcggc gaggagggcc
     4261 atgatgtcag gtgcatgtta gagcattttt cgattaggat gatcttacca gtgtcattgc
     4321 ccggcttgat gctggatcac ccggccaggc cgggcaatga cagcactggg aaagtcgacc
     4381 caatctgcaa cccgagggag gatatgtcat gtcgtttcgt ttggccgtcg ccgccgcagc
     4441 gggagcaatg atgatcgtgc ccggcgtcgc gtgtgcgcaa gttttgatgc agcgcgacgt
     4501 gtctctgcgc atggccttga cgattgcgga agcagcgcta gccgagtgcg gcaccaccac
     4561 ctcggtggcg atcgtcgacc gcgccggccg actgcgggtg ttcctccagg gtgacaacgc
     4621 caatccgcac aacatcgagc tcgcccgccg caaggcctat acggcgcgca cgtttcgagc
     4681 cccgtccgcg gagtgggcga aacgcaccga aaccgccaac agcggccagc gtatgctcgc
     4741 cgaggtgatc ccgctcggtg gcggtatgcc cat
//
LOCUS       DATILV010000249         9513 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1593733, whole genome shotgun sequence.
ACCESSION   DATILV010000249 DATILV010000000
VERSION     DATILV010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9513
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1593733"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1065
                     /locus_tag="VLJ17_05785"
     CDS             <1..1065
                     /locus_tag="VLJ17_05785"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV22524.1"
                     /translation="AKRLVTLPPPKAVTVADVLTTQRKLNAFGITSVRIPGSYKGEFF
                     QALDAILAARREGALSLRYTIYLPGSGVREPARIREIIEKSPLKQDEGDEWVRIGGIK
                     LLVDGGFEGGHMSEPFAGPYGKGGTFYGLTVVPPKEYNAVVKTINDLGWRATTHAVGD
                     AAIDQVLDAYEAANAERPIAGKRWSIEHLFVSQPAQFARMRKLDVILSVQDHLYLAAP
                     ALKNYLGAARASRITPLKSYLDAGFLVVSGTDSPVVPFNPFFAYYHFLTRDTISDGVY
                     GSDEAVMSREDLLRMLTINYAKLTGEIDIKGSIEPGKLADFAVLSEDLLTVEAAKIPT
                     MRAVLTYVGGREVFRDTAMR"
     gene            complement(1199..2149)
                     /locus_tag="VLJ17_05790"
     CDS             complement(1199..2149)
                     /locus_tag="VLJ17_05790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketopantoate reductase family protein"
                     /protein_id="HSV22525.1"
                     /translation="MTAPSFENIAVMGAGAVGCYFGAMLARAGANVRLIGRSSLVDAV
                     ARGGLRLERNGLANNISMSATIDPAGVASAGLVLFSVKSPDTETAARAIAPHLAPGAV
                     VLSLQNGVDNFERLRAHIANTVIPAVVYVAAEIAAPGVVRHNGRGDLVIGEFGPHQAG
                     DVVIANLAAYLTGASIPTRISDNIEGELWWKLTLNCAYNAVSALGHSRYGSMMEMPQV
                     RQVMAEAVREIIALANVKGVRIAMLDPVEATLRFGDAMPEAVSSTAQDLGRGRMTEID
                     HLNGYVVRECDAQGLQAPVNRTLHALVKLLEQSTTFSSLA"
     gene            2366..3220
                     /locus_tag="VLJ17_05795"
     CDS             2366..3220
                     /locus_tag="VLJ17_05795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22526.1"
                     /translation="MQYRNTMGAVTLMAALGGTATSAQVIDYSKYPDWSGQWARVPDG
                     GPPRYDPSKPPRHGQQAPLKPKYLAIYEASLKDQAEGGQGLDIAYRCIPSGMPRQMSG
                     VAPFEFVITHDTTFILFELMTQQPRRVYTDGRAWPKEVEPTFVGYSIGKWRDSDGRFD
                     TLEVETRHLKGPRIFDQSGTPMADDNETVIKERFFLDKTNPNILHNEMTTTDNALTRP
                     WTATKNYRRLPEVQWTENNCTEGNNHIVVGDQNYYLSGDGYLMPARKGQQPPDLRYFR
                     AAEKRNRQ"
     gene            3277..4137
                     /locus_tag="VLJ17_05800"
     CDS             3277..4137
                     /locus_tag="VLJ17_05800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22527.1"
                     /translation="MKCLYSVASIAVAAAFCASAADAQIFDLSKYPDWAGQWRRVPDG
                     GPPRYDPSKNNGLAQEAPLKPEYQKMLEASLKDQEAGGQGLDTTYKCIPTGMPRMMHG
                     VFPVEWVFTPNVTYMLSEFMIQQPRRIYTDSRSFPKEEDPTYVGYSIGKWLDTDGDGR
                     LDTLEVETRNIKTPRTFDQSGIPVAPDGLSVVKERIFLDKTNPNILHNEITTTDSALT
                     RPWTVMKNYRRDRNVLWTENNCTEGNMHVVIGTENYFISGDGYLMPARKGQQPPDLRY
                     FRAAEKRTQK"
     gene            4262..4669
                     /gene="msrB"
                     /locus_tag="VLJ17_05805"
     CDS             4262..4669
                     /gene="msrB"
                     /locus_tag="VLJ17_05805"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007066169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HSV22528.1"
                     /translation="MDAKQYAVTHTDEEWRRLLTPEQYQVMRRHGTEAPGSCALNYEK
                     RPGAFMCAGCDQPLFISKQKFESGTGWPSFNDPVEGAVETSTDKTYGMIRTEVHCSRC
                     GSHLGHVFNDGPPPTHLRYCINGVALNFRPEKT"
     gene            complement(5699..5992)
                     /locus_tag="VLJ17_05810"
     CDS             complement(5699..5992)
                     /locus_tag="VLJ17_05810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22529.1"
                     /translation="MRRQLNGMKREHYPWMFDVTKCAAQEAIIDLGTAFRALFEKRGE
                     RDIYHWFTILAPRGGRTRGTLAAARPWRVWLNDMPRGYAAHIHLGFWRARGFP"
     gene            complement(6057..6146)
                     /locus_tag="VLJ17_05815"
     CDS             complement(6057..6146)
                     /locus_tag="VLJ17_05815"
                     /inference="COORDINATES: protein motif:HMM:NF023742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSV22530.1"
                     /translation="MMLAHKIALDPTNKQRTYFARACGTARLS"
     gene            complement(6247..6468)
                     /locus_tag="VLJ17_05820"
     CDS             complement(6247..6468)
                     /locus_tag="VLJ17_05820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22531.1"
                     /translation="MERIAGISAAADVLGVSISTLRRWEAQAGGRTYSERSSPLRSRQ
                     AAPEAKKVEVAETKARTRTFEEDLAKDVF"
     gene            complement(6507..6833)
                     /locus_tag="VLJ17_05825"
     CDS             complement(6507..6833)
                     /locus_tag="VLJ17_05825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSV22532.1"
                     /translation="MYTHAQRRSGALTQKLRDRAGVWLRELRERRGLSQRELAARVGA
                     EYYTFISRLETGRGRVPPDRYLIWAQALGIDKREFVRTLMSFYDPVTYGILFDQGARS
                     QQKLEQ"
     gene            7899..9182
                     /locus_tag="VLJ17_05830"
     CDS             7899..9182
                     /locus_tag="VLJ17_05830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018459383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HSV22533.1"
                     /translation="MSRSCSFGLVALSIIGVAFAMSAWAAPLEPVHSLAAMKAPLLNM
                     LEELVSIESGSSDREGLDRIAAVIAGRLRALGGQVEMIEANPADTYRMVDTPKEIGKM
                     VLARFSGTGTKKILLIAHMDTVYQRGMLEKQPFRVDGNRAYGLGIADDKNGIAVILRT
                     LSILQAMNFREYGLITVLINADEEVSSPGSRTILTKLGAEHDVVFSCEGTLVSSDRLS
                     LTTAGIGAILLNITGRASHAGQAPELGRNALLELAHHMLQTRDLSDPTIGLKMNWTLG
                     TGGTVRNIIPPVASAVADVRVLRVADYDAIERKVRERIKNQLIPDTKVEMTFERRRPP
                     LEMTAASQALGKHAQRIYSEIGHNLAIGEVAEGGGTDAAFAALNTKAPVLERFGLRGF
                     GEHSNEAEYIEIDSIEPRLYLLTRMIMDVSQGKHQ"
BASE COUNT         2049 a         2867 c         2800 g         1797 t
ORIGIN      
        1 gccaagcgcc tcgtcacctt gccgccgccc aaggctgtca cggtggccga tgtgcttacg
       61 acccagcgca aactcaacgc cttcggcatc accagcgtgc ggattcccgg cagctataag
      121 ggcgagttct ttcaggcgct cgacgccatc ctggcggcgc ggcgcgaagg cgccctgagt
      181 ctgcgctaca ccatttatct tccaggctct ggcgtgcgcg aacccgcccg catacgggag
      241 atcatcgaaa aatcgccgct caagcaggac gaaggcgacg aatgggtgcg catcggcggc
      301 atcaagcttt tggtcgacgg cggcttcgag ggcggtcaca tgtcggagcc gttcgccggc
      361 ccgtacggca agggcggcac cttctatggt ctcaccgtgg tgccgccgaa agagtataac
      421 gccgtcgtca agaccatcaa cgatcttggc tggcgcgcca ccacccacgc ggtcggcgac
      481 gccgccatcg accaggtgct cgacgcctac gaggccgcca atgctgagcg cccgatcgct
      541 ggcaagcgtt ggtcgatcga gcacttattc gtgtcgcaac ccgcgcagtt cgcgcgcatg
      601 aggaagctcg acgtcatcct gtcggtgcag gaccatctct acttggcggc gccagccctg
      661 aagaattatt taggcgcggc gcgggcgagc cggatcacgc cgctgaagag ctatctcgac
      721 gccggcttcc tggtggtgag cggcactgac tcaccagtgg tgccgttcaa cccgtttttc
      781 gcctactacc acttcctcac ccgcgacacg atatcggacg gcgtctacgg gtcggacgaa
      841 gccgtaatgt cgcgagaaga cctgttacgc atgctcacca tcaactacgc gaagctcacc
      901 ggcgagatcg acatcaaagg ctcgatcgag cccggcaagc tcgcggattt cgcagtgctg
      961 tcagaggatc tgctaacggt ggaggccgcg aagattccga ccatgcgggc ggtactgact
     1021 tacgtgggcg gacgcgaggt gtttcgcgac acagcgatga ggtagaggta ggttgggcaa
     1081 aggagcgtgg cagcgccccg cgagctacga catccgtctc gcgctgtacc caccgcaacg
     1141 cctccagagt ggtgggcacg cttcgctttg cccacccatt ggctttttgg acgcgacctc
     1201 aggcgaggga ggaaaaagtt gtgctttgct ccaataactt caccagcgca tggagcgtgc
     1261 gattgaccgg cgcctgcaat ccttgtgcat cgcattcacg caccacatag ccgttgaggt
     1321 gatcgatttc ggtcatccgg ccacgcccca agtcctgggc ggtggaggag actgcctccg
     1381 gcatggcgtc gccaaagcga agcgtcgcct cgaccggatc gagcatcgcg atccgtaccc
     1441 ccttgacgtt cgccaatgcg atgatctcgc ggaccgcctc ggccatgacc tgccgcacct
     1501 gcggcatctc catcatggac ccataccggc tgtgccccag cgccgacacc gcgttgtagg
     1561 cacaattcaa ggtaagcttc caccacagct cgccctcgat attgtcggaa atccgcgtcg
     1621 gaatgctcgc cccggtaaga taagcggcaa gattcgcgat cactacgtcg cccgcttggt
     1681 gcggaccgaa ctcgccgatg accagatcgc cgcgaccgtt atggcgcacc acgccgggcg
     1741 ccgcgatttc tgccgccaca tagaccaccg ccggaatgac cgtgttggcg atgtgcgcgc
     1801 gcaagcgttc gaaattgtcg acgccgttct gcaggctaag cacgacggcg ccgggcgcta
     1861 agtgcggcgc gatcgctcgc gccgccgttt cggtgtcggg cgacttgacg ctgaacagca
     1921 ccagcccggc actcgcaacg ccggccggat cgatcgtcgc cgacatggag atgttgttcg
     1981 cgagaccgtt cctctcaagc cgcagtccgc cgcgcgcgac cgcatctacc agcgatgatc
     2041 tgccgatcaa ccgaacattc gcgccggcac gcgccagcat ggcgccgaaa taacagccga
     2101 ccgcgccggc gcccattacg gcaatatttt caaacgaagg ggccgtcatt ggtactccac
     2161 ggcgcacact gcgcgccttt gttcagatgc atcattcctg tcgggtctta agcctgtgcc
     2221 acagacagca gcttaggcgc cccttgcgtt tcgatagcac attggcgcgt ggcggcatgc
     2281 gtgccgctgt ggtagattcg gccatttcgt caacggtgcg cagcggtgcc accgccgcgt
     2341 ccgaaagatt ttacgggagg aaggcatgca gtaccgcaac acgatgggtg ctgtcacgtt
     2401 gatggccgcc ctggggggca cggctacctc cgcacaagtc atcgactaca gcaaatatcc
     2461 cgactggtcc ggtcagtggg cacgggtgcc ggatggcggc ccgccgcgct acgatcccag
     2521 caagccgcca cggcacggac agcaggcgcc attgaagccc aaatacctcg ccatctatga
     2581 ggcgagcctc aaggaccaag ctgaaggcgg acaggggctc gacatcgcct acaggtgcat
     2641 tccgagcggc atgccacgtc agatgtccgg agtggcgccg ttcgagttcg taatcacgca
     2701 cgacaccacg ttcatcctgt tcgaactaat gacgcagcag ccgcgtcgcg tctataccga
     2761 cgggcgcgcc tggcccaagg aggtcgagcc gacctttgtc gggtattcga tcggcaagtg
     2821 gcgcgatagc gacggccgct ttgacacgct cgaagtcgag actcgtcacc tcaaaggacc
     2881 ccgcattttt gaccaaagcg gcactccgat ggccgatgac aacgagacgg tcatcaaaga
     2941 gcgcttcttt ctcgacaaga ccaacccgaa catccttcac aacgaaatga ccacgaccga
     3001 caatgccctg acgcgtcctt ggaccgcgac aaagaattac cgccgcctgc ccgaggtgca
     3061 atggacggag aacaactgca ccgagggaaa caaccatatc gttgtcggtg accagaacta
     3121 ttacctgagc ggtgatggct atctgatgcc ggcccgtaaa ggtcagcagc cgccggatct
     3181 gagatacttc agggccgccg agaagcgcaa caggcagtga cgggttgcgc cagaatcggt
     3241 gaccgacaac gagaagatac gcgcaggagg aacgacatga agtgtctgta ttcggtggca
     3301 tccatagccg tggcagccgc attttgcgca tccgccgccg acgctcagat tttcgatctg
     3361 tctaaatatc ccgactgggc cggccaatgg cgccgcgtgc cagatggtgg tccgccgcgc
     3421 tacgacccca gcaagaacaa tgggctcgct caggaagcgc cgctcaagcc agagtaccag
     3481 aaaatgctgg aggcgagcct gaaggaccaa gaggccggtg ggcaggggct cgacaccacc
     3541 tataaatgca ttccgaccgg catgccgcgg atgatgcacg gcgtgttccc ggtcgaatgg
     3601 gtattcacac cgaacgtcac ctacatgctt tccgagttca tgatccagca gccgcgccgc
     3661 atctataccg acagccgcag ctttccgaag gaggaagacc cgacctatgt gggctattcg
     3721 atcggcaagt ggctcgacac cgacggcgac ggacgcttag atacgctgga ggtcgagacc
     3781 cgcaatatca agacgccgcg caccttcgac caatccggta ttccagtcgc accggacggc
     3841 ctgtcggtcg tcaaggaacg gattttcctc gacaagacca atccgaacat cctccacaat
     3901 gaaatcacca cgaccgacag cgcgctgacg cggccgtgga ctgtaatgaa gaactatcgc
     3961 cgcgaccgca atgtgctgtg gacggaaaac aactgtaccg aaggcaacat gcacgtggtc
     4021 atcggcacag agaattattt catcagcggc gacggctatc tgatgccagc ccgcaagggc
     4081 caacagccgc cggatttgcg atatttccga gctgccgaga agcgcacgca gaagtgaggc
     4141 agggtgacga aatttgtcgg cgttgttgat gggtaacgtg ccgctgatta cgtggaatgg
     4201 gtaagcgata gcgaaaccat cgcaacgggc gatgatgaac gatgggcaaa caggagcgat
     4261 catggacgcc aagcaatatg ctgtcaccca tacggacgaa gaatggcgcc gtctgctcac
     4321 gccggagcaa tatcaggtga tgcgccgcca tggcaccgag gcgccgggaa gctgcgcgct
     4381 caattatgag aagcgccctg gcgccttcat gtgcgccggc tgcgatcagc cgttgttcat
     4441 ttcgaagcag aaattcgaga gcggcaccgg ctggccgagc ttcaatgatc ccgtggaggg
     4501 cgcagtcgaa acctcgaccg acaaaaccta cggcatgatc cgcaccgaag tgcactgcag
     4561 tcggtgcggc agccatctcg gccatgtgtt caacgatggt ccgccgccga cccacctgcg
     4621 ttattgcatc aacggggttg cgttgaattt tcgtccggag aagacctagg accgggcccc
     4681 cgacaccttc ccacaggggc ccacaagggg aggcgcgcgg ccttactggg aactggtgga
     4741 atgtgattat attggcaata tgcggcttgg gtcggaacgg gacgcagcgc tgcagcaggc
     4801 gctcgggcgc gagaagagga ccgcgaagcg gcgggcagca gcgccacctg acttaatctg
     4861 tgcgttgaac tcgtgccgtt gcggctgttg cctttgcggc gccccgctgg atcacccttc
     4921 tcgtagccga gatgttcggt tagctccgcc ccaagcgctt gaaaaatccg tcgtccccgg
     4981 tcaggtcttc tggcttctca tagttagcaa gtagttgatc aagtaactcc ggtgtaatcg
     5041 tcgaattcca ttgtcatgtg agtctcctcc ataaagtaaa ctcacagaaa cctgcttaca
     5101 cattctttct gacaccctca gcccaaatca tttctctttc gacgcggacc ggcgccacac
     5161 cattgtcgct gcagacaccc gtctccgacc acgggcactt tgtttggtcc aaattcatgt
     5221 gactctggtt tttatccacg tccaacacca agctaatgca acgcacaatc cgaaatagag
     5281 cagaagcaat ccaagaagct ccgcccaatc cacatagacg tggacataca acagaggctc
     5341 tatctgatcg gtctgactga atatccgact cgccatccag cgccttgcga caccggcact
     5401 cgccaaatca acgaaataaa caaatccgag cgtggccgcc acaaaagcag cggaaaccag
     5461 tatcgccgct atccgttggt tccctaatga ggaagaagcg ttggcctgac aatattagag
     5521 agatttccaa agaatatcgt agctcgtgga ttgcagtgat taccgcgcac aagctaagta
     5581 tgtctgcgtg gcgtggtgag tcatagtacc aacagccttt gttcttggtt atctctctgt
     5641 ccgttctact gtacgtatat ccaacgctgg acagaccaag atcgcagagg gaaagtactc
     5701 agggaaaccc cctagccctc caaaacccta ggtgtatgtg ggccgcatag cctctgggca
     5761 tgtcgttcaa ccaaacgcgc caggggcggg cagcggcgag agtgccccga gtccggccgc
     5821 cacggggcgc gagaattgtg aaccaatgat agatgtcgcg ctcgccgcgc ttctcgaaga
     5881 gcgcccgaaa cgcggtgccg aggtcaatga tcgcctcctg tgcggcgcac ttcgttacgt
     5941 cgaacatcca cgggtaatgc tcgcgcttca tgccgttaag ctggcggcgc aatgcggctt
     6001 ccgaaggttt gccacccgcc tcgtattgcc gcttccattc ggccaaggcc caattgttaa
     6061 gagagccgcg ccgtgccgca ggcccgcgca aagtaggtgc gctgcttatt ggttggatca
     6121 agcgcgattt tatgagccag catcattgcg gcgattcctc aacagcgcgt ttgacgccat
     6181 ccagaagctt tgggttcttg tgggatcgtg agccgtagag gcggggcgct aaagacggtg
     6241 ataatcttaa aaaacgtcct ttgccaaatc ctcctcaaag gtccgtgtcc ttgccttggt
     6301 ttcagcaacc tcaaccttct tcgcttcggg cgcagcttgg cgagatcgta gcggcgatga
     6361 ccgctcgctg tatgttcggc caccagcttg cgcttcccag cggcgcagcg tcgaaatcga
     6421 cacgcccagt acgtccgctg ccgcgctgat gccagcaatc ctctccatat tgcagagaat
     6481 tggacggatt cgcgaagatt atagaattac tgttctagct tttgttggct ccgcgctcct
     6541 tggtcgaaaa ggatgccgta ggtcacaggg tcataaaagg acatgagggt gcgaacaaac
     6601 tcacgcttgt cgattccgag cgcttgcgcc caaatcagat aacgatcggg aggaacacga
     6661 cctcgcccgg tctcaagccg ggaaatgaag gtatagtact cggcacccac ccgagcggct
     6721 aactcccgtt gtgatagacc acgcctctcc cgcaactcgc gcagccagac ccccgcccga
     6781 tcacgcagct tctgcgtaag cgcaccggag cgtcgctgag cgtgagtata catttcaccc
     6841 gatccttacc ttccgttccc ccggcatgtg atgcgccagc ggggccaagc gacagacctc
     6901 atggccaagg cttccgagca gtgtacgcag tgcatgctga caaacgacaa acggctttcg
     6961 tttcggtacg acgaaagcga atcccagccg tatcggggat ataggcaggc caaggggctt
     7021 gggccgatta ccgaatctga aggtgatcaa agctgacggc gacgctgatc ggccaaaatg
     7081 ctaaaattac taataagttg gtttataact aaaaagttag tttataacta atgagttagg
     7141 ttccgccgcg cgcgataccc ttaggttttc gtattccgta gaaatagagg ctaataaatg
     7201 cgagctgtac gccggcttct cttcgcgagt ttccctgtgt tgacgccggc gcaagaacag
     7261 aacggctcga ctcgaagcct gcttgcaacc gagaacaccg ggcgcggcgg ttctggttca
     7321 cgtgaagcaa gagcacaaca ggagcgaatc attgagctgc tgcaagaaca tctcaacaat
     7381 ggatctgatc gagtcccctc cgggtcaaga ttcgaccgtc acgacgcgtt gctggccgcg
     7441 ggggctccgc ctttggaagc ggaaagaacg gccggcaccg aacggttcga cgacttatcc
     7501 tccgattgct tccgtagcag ttgggcagcc gatactcaag ctccgggcca aggaacgaaa
     7561 ccactcgcgc ggtaaaacgc tgcgcgcaag gcaaaccgac aggaccactg agtcgggtag
     7621 cgattactcg aagtaggagt gaagccacag agcagagatg ccagattgat tgcgccagag
     7681 ttcggcaggg ccgaaaatcg actctcccga ccggggcctt gcgggagagg aaacagtgca
     7741 tcggtttagg gtgcgcgttg attttgtctc agatcgggtg ctgggaaggt tgccttgccg
     7801 taaaggtcgg aacggcccac tattgggcat ggtacgcagc ggatctaggc ccaacgtgcg
     7861 ggaataggac tgccccatta tcggatgcgg aggcgttgat gtcgcgttct tgcagctttg
     7921 gactcgtggc cctttcgatt atcggcgtcg ctttcgccat gagtgcgtgg gccgcgcccc
     7981 ttgaacccgt gcattcgctg gcggccatga aggcaccgct cctcaatatg ctcgaggagt
     8041 tggtttcgat cgaatctggc agtagcgacc gtgaggggct cgacaggatt gcagcggtga
     8101 tagccgggcg acttcgggcg ctgggcggcc aagtcgagat gatcgaagcc aatcctgccg
     8161 atacctaccg gatggtcgat acgcccaagg agatcggcaa gatggtgttg gcgcgcttct
     8221 ccggcaccgg caccaagaaa atcctgctga tcgcgcacat ggacaccgtc tatcagcgcg
     8281 ggatgctgga gaagcagccg ttccgcgttg acggcaaccg cgcctacggg ctcggcatcg
     8341 ccgacgacaa gaacggcatc gccgtcatcc tgcgcacact atccatcctg caggcgatga
     8401 attttcgcga gtatggtctc atcaccgttt tgatcaacgc cgacgaggag gtcagttcac
     8461 ccggctcgcg cacgatcctc acaaagctcg gtgccgagca cgacgtggta ttttcctgcg
     8521 aaggcacgct ggtgtcgtcg gatcggctct cactcaccac cgctggcatc ggggcgattc
     8581 tgctcaatat aacggggcgg gcatcacacg cagggcaggc gccggaactg ggacgcaacg
     8641 cgcttctcga actcgcacac catatgctgc agacccgtga cttgtcggac cctactatcg
     8701 gtctgaagat gaactggacg ctgggcaccg gcggtacggt gcgcaacatt atcccgccag
     8761 ttgcatcagc cgttgccgat gtgcgggtgt tgcgcgtggc tgactacgat gcgattgaac
     8821 gcaaagtgcg cgagcgcatc aagaaccaac tcattcccga caccaaggtg gagatgacat
     8881 tcgagcgccg gcggcccccg ctggaaatga ccgcggcttc gcaggcgctc ggaaagcacg
     8941 cacagcgcat ctactcggag atcggccaca atctcgccat cggcgaggtt gccgaggggg
     9001 gcggcacgga cgcggcgttc gcggcgctca ataccaaggc gccggtcctg gagcgcttcg
     9061 ggctgcgcgg tttcggcgag cattcgaacg aggctgaata catagagatc gattcaatcg
     9121 agccgcggct ctatctgctc acccggatga tcatggatgt gtcccagggc aagcatcagt
     9181 agcttcgagg ggatcgcgag cgtagtgccg atgtcgattg caccgtcggc aatctgatgt
     9241 gggcaaagct gcccagcaag gcgcgaccgg agaaccactg agtcgggcaa caccccggtc
     9301 gctatcggct gctgcatact tgggagccag cctgatcgcc tcggtatagt cgcgatagcg
     9361 tggtcgaagt cgcctcgcgc ggcgccgcgg ttgttggagg cgacggcgta cctgggctcg
     9421 atccggatcg ctacacaata ctcggcgatg gtggtcattg tcgcccttgg cagcgtacgc
     9481 gaaaccacgt gagaatgcat gcttcgggtc gag
//
LOCUS       DATILV010000250         3199 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2870137, whole genome shotgun sequence.
ACCESSION   DATILV010000250 DATILV010000000
VERSION     DATILV010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3199
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2870137"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(264..1037)
                     /locus_tag="VLJ17_05835"
     CDS             complement(264..1037)
                     /locus_tag="VLJ17_05835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22534.1"
                     /translation="MPEGISGAGWAFSWGLAAASGVLVGTTLGMIVGLPHRVIAAIMS
                     FGAGVLVSAASISIKITSEALIVAGAVFTAVAIIAGAALFSVANAALPKAKDRKRCGE
                     CKPQLSERQAPGSGTSIVLGTALDAVPEALVLGVTLRFSGSDVALVIGAVALSNVSEA
                     LSATTGMRAACRSSTYVLTLWSGIALGTAAMTALAFYLLGDLGSHLTAILKAFGAGAI
                     IAMAAETMAPEAFHNGPRYSGLLAASGFAALLLLSKIAK"
     gene            complement(1456..2205)
                     /locus_tag="VLJ17_05840"
     CDS             complement(1456..2205)
                     /locus_tag="VLJ17_05840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014498347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin reductase"
                     /protein_id="HSV22535.1"
                     /translation="MAQQLKWQLGTVVEIREETPTAKSLILDLLDWTTHVAGQHVDVR
                     LTAEDGYQAQRSYSIASPPGDKHLMLTVERLDDGEVSPYLTDGLGVGDRIELRGPIGG
                     YFVWDPRNLGTNGHPLFLAAGGSGIAPLMSMIRHRASTGNKVPTRILYSSRSYEEVIY
                     REELDRLSAHDPTLRVIHTLTRRRPPNWMGYGRRIDRAMLADTAWRPEEKPLAFTCGP
                     TAFVETVATHLGELGYEPGRIKTERFGPTGG"
     gene            complement(2210..2839)
                     /locus_tag="VLJ17_05845"
     CDS             complement(2210..2839)
                     /locus_tag="VLJ17_05845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007561175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite oxidase-like oxidoreductase"
                     /protein_id="HSV22536.1"
                     /translation="MAEQFISRGFKGRARHTDRALKERIPPGQYETKEFPVLSAGPTP
                     RTPLERWDFSIHGEVAEDLKWTWDEFLKLPRETSTVDIHCVTKWSKLDTLWTGVSVDT
                     LLAGIDLDAQPSVRYLIAFCDGGYTTNLPLADVRRGKAWVVYEFGGKPLEPVHGGPAR
                     LLVPHLYFWKSAKWVRGFELVRDDRPGFWESVGYHNYGDPWKEQRYAGD"
BASE COUNT          640 a          981 c          917 g          661 t
ORIGIN      
        1 gtgcgtgatt ttgctgctct ccctagcccg atttctgcca agtgccttgg aatgtgatgg
       61 tggcctggga cggaattgat tcactagtag ccgaatagac gttcattgcc gattaacttc
      121 cgaattgttc gtgagcacta gcgttacacg ggagtgatat agaggccgct tgcaatcgca
      181 tcagattgcc gacttctgcc gttcgcactt cggcagcggc agctgccgcg tgcggctgtg
      241 cggcgcgtat ccgaacacga ggttcacttg gcgatcttgc tgagtaggag gagggctgca
      301 aagccagaag cggcgagaag gccggagtac ctgggcccat tgtggaaggc ctctggtgcc
      361 atagtttccg cggccatcgc gatgatcgcc ccggctccaa atgccttgag gattgccgtc
      421 aggtgagagc caaggtcacc gagcaagtaa aacgcaagag ccgtcatggc ggccgtacca
      481 agcgcaatcc cgctccacag ggtcaggaca taagtagatg agcggcacgc ggcgcgcatc
      541 ccggtcgttg ccgaaagtgc ctccgagacg ttcgagagcg cgaccgcccc aatcaccagt
      601 gccacatcgg atccgctgaa ccgcagggtg actccaagga ccagtgcctc cgggacagcg
      661 tccagcgcgg tgcccagtac aatcgacgtg ccactgcctg gcgcctgcct ttccgagagc
      721 tgtggcttgc attccccgca acgcttgcga tctttggcct tcgggagagc tgcgttcgcg
      781 acgctgaaca aagcggcacc ggcaatgatt gcgactgctg taaataccgc accagcgacg
      841 atcagcgcct cggacgtaat cttaatagag atagaggcgg cggaaaccag cacaccggcg
      901 ccgaacgaca tgatggcggc gatcacgcgg tgcgggagcc caactatcat ccccagcgtt
      961 gtcccgacaa gcacgccgga cgccgccgcc aatccccagc tgaaggccca ccctgctccg
     1021 ctaatccctt cgggcatagc atgctcctct tcgtgctaaa cgacacgcta gtcttgcgcg
     1081 ccgccttagt aaaggcgaaa gacgaggcgc cctcctcgat atgcggtgca gttgaaactc
     1141 tttattagtc aatgtttgta cagtttgtcg tgtattaatg agtttccgag gtgattcgaa
     1201 ggtaggtcat accgctgagg tcgaggctgt agcacccgcg gatgtacgta atccgcatca
     1261 gcgctgtgtc gcattcggcg cagcgtagta ttgcgcccat cccgtgttgg taaagcatca
     1321 actcgccgat aggtctcatt gtgccgcagc ccccgcatgt cgcctctgcg gccgtcatct
     1381 caaaccgaaa gatttcgttc agcagtccgc ccgccgcgtt gccgtccaac ctcaaatcgt
     1441 tatcctgcat gtcgctcaac ctccagtggg cccgaatcgt tccgttttga tgcgtcccgg
     1501 ctcgtagcct aattccccta aatgtgtggc gacggtctcg acgaaagcgg tcgggccgca
     1561 agtgaaagcg agcggttttt cctccggccg ccaggcggtg tccgccaaca tcgcccggtc
     1621 aatcctgcgc ccgtaaccca tccagttcgg gggccgccgt ctggttaaag tgtgaataac
     1681 gcggagcgtt gggtcgtgcg cggataaacg gtccagttcc tcgcggtaaa taacctcttc
     1741 gtaggaccgc gacgagtaaa ggattctggt cggaacctta ttacccgtac tcgcgcggtg
     1801 gcgaatcatc gacataagcg gcgcgatgcc gcttccgccc gcggcgagaa atagcgggtg
     1861 gccgttggtc cccaggttgc gggggtccca tacaaagtag ccgccgatcg gcccgcgaag
     1921 ctcgatccgg tcgccgacgc ctaacccgtc ggttagataa ggcgaaacct cgccgtcatc
     1981 gaggcgctcg accgtgagca tcagatgttt atctcccgga ggcgacgcaa ttgagtagct
     2041 gcgctgcgcc tggtaaccgt cttccgccgt caggcgcacg tcaacgtgct gccccgccac
     2101 gtgcgtggtc caatccaaca aatcgagaat caggcttttt gccgtcggcg tttcctcccg
     2161 gatttcgacc accgtgccga gttgccattt aagctgctgc gccatgcctt taatcacccg
     2221 cgtatcgctg ctctttccag gggtcgccgt agttgtgata gccgaccgac tcccagaatc
     2281 cggggcggtc gtccctgacg agttcgaagc cgcgcaccca tttcgcgctt ttccaaaaat
     2341 agagatgcgg cacgagcagg cgggccgggc cgccgtgcac gggctcgagc ggcttgccgc
     2401 cgaactcgta aacgacccac gcttttccgc ggcggacgtc ggcgagcggc aggttcgtcg
     2461 tatagccgcc gtcgcaaaag gcgatgagat aacggacgga cggttgggcg tcgaggtcaa
     2521 tgcccgcgag caacgtgtcg accgagacgc ccgtccagag ggtgtcgagc tttgaccatt
     2581 tggtgacgca gtgaatatca accgtagagg tctcacgagg cagcttcagg aattcgtccc
     2641 aggtccactt caggtcctcg gcgacctccc cgtggatcga aaagtcccaa cgctcgagcg
     2701 gcgtccgcgg agtcggcccg gcggacaaca ctgggaactc tttggtctca tactggccgg
     2761 gcggaatgcg ttctttgagc gctctatcgg tatgccttgc acgccctttg aaaccacgag
     2821 agataaattg ttcagccata aggaacctcc ttttaaaaaa ggctcagtct cggttcgaga
     2881 acaccgtcat cactcctggg gctcgctcga actgccgtgc atgaccgagt ccttcggcac
     2941 agacttcagt gaccgagcac cagcaggatc agtaaggcca cgcgatcgtt ctttcacatt
     3001 gagcaatctt catcttgtct cccttaactt gttaactggc atacgccacg gcggtgtcaa
     3061 cgatccactc caacggtcgc ggctgaaaat tcagttcgcg ttttgccttg gcattcgata
     3121 cgcctcgcat ctgagtcccg tagtaaaccg catccgcacc acttgctttc agagcatcct
     3181 caaccgatat ctgcggcgg
//
LOCUS       DATILV010000251         4277 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1339093, whole genome shotgun sequence.
ACCESSION   DATILV010000251 DATILV010000000
VERSION     DATILV010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4277
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1339093"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            571..1578
                     /locus_tag="VLJ17_05850"
     CDS             571..1578
                     /locus_tag="VLJ17_05850"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HSV22537.1"
                     /translation="MFRATGPGRVDVIFENKSANILEALLFNFDFDDFDDRKFRTLKT
                     EHQNFLETRVVPLLEKGKGNIWIQGSASKVGTSEWNMTTSMVRAGQVQAYLLDRNIDS
                     TQIVADAIGNKVALGHTNDDARDRSVVIWVYPNVTAAKPLPKQVPPRPRIGPNKVKKV
                     YIYDQTSGIDRGQASGRFDADEVLTIPISGGITELRKQFDALLASGQTFDRVLFQTHG
                     GPGRIWFGSEALNKETLKTYFAGYTGLFPTATRIYFDGCNVAEGGDGTDFLLAAGYVF
                     LKIGGGETFGWVNLGHGLPGWIPFFGGHTIHFGGGNNLKRIRFFTGGQPNFPGSWIPA
                     R"
     gene            complement(2242..3219)
                     /locus_tag="VLJ17_05855"
     CDS             complement(2242..3219)
                     /locus_tag="VLJ17_05855"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV22538.1"
                     /translation="MKLPRRQFLQLAVGAAALPVVSGFAWSQAYPSRPVRIIVPFPPG
                     GSTDTAARIIGESLSRSLGRQVFVENRAGAGGNIGLEAAARSSPDGYTFLVTTDWVAG
                     AAHVSKLSIDPLKDLVPVIYASRLPVVLAVHPSLGANSIAELIALAKQQPGLNYVIGG
                     GTGNEQHFVAEWFAQIAGVKFAHVPYRGGGQAINDLIAGHVKIGSLGSTPVIPHYKAG
                     TLRLLAQSTAARSPSLPDVPTYQEAGINGLVLDQWHGVFVPVGTPPAIAARLNAEINK
                     VVADSAVRESFFKQGQEPVGGTAEDFAQFFRGEYAKYERLSKELNIKAE"
     gene            3565..4236
                     /locus_tag="VLJ17_05860"
     CDS             3565..4236
                     /locus_tag="VLJ17_05860"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018045681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family cysteine hydrolase"
                     /protein_id="HSV22539.1"
                     /translation="MPTIKIEAEPAPLRIDLTHAALVIIDMQRDFLEPGGFGAALGNE
                     VSRLEVAIEPCRNVLAAFRAQGVLVIHTREGHRPDLTDAPPHKVERGDPSLRIGAPGP
                     MGRILVRGEPGHDIIPMLYPTKGEPVIDKPGKGAFYQTDLDLMLRNRAIDTLFVCGVT
                     TEVCVNTTVREANDRGFRCIVLSDCCASYFPEFHAAGLAMIKAQGGIFGWVTDSRRLL
                     AALPS"
BASE COUNT          891 a         1252 c         1268 g          866 t
ORIGIN      
        1 gactcgctca atgtgacgcg attgacccgt tgccgacatc tcgcctcaga tcaccgtacc
       61 ttcactgtac gcgcggcggc cacgtgacgg gaccaaactt gagcgtccgt cggtcgttgg
      121 ctcggatctc ggccatgtcc ccgctgaaat agaacgcatc ggctaatggg cagccctgac
      181 atcccgagcg acgcgggcta actgactgaa ttggatcgta tttcgcactg cacactatcc
      241 gctagggtat tgctttagcg gactgaaaat tcgtggccga ttttgcgtcg caggagttga
      301 tttcgttcaa cgaatagcag cgtcaccgtc gcaagtagct gtggcgcccg tattgaacca
      361 gaccatcgcc caactcaact aaggaaacag gacgagcttt tggccgagtt cttgccgagg
      421 acaggccaat tccccgtccc ttgacagctc ggcaaaaaca actgccgtgg tctgccggcg
      481 gagcaaggcc gcatcctcat tgtatgtcga tctgtgcgta ggcgcacgaa ctatgccttt
      541 tcgtgttgtg tcccctagat ggaggaaaaa atgtttcggg ccaccggacc aggaagggtt
      601 gacgtgattt tcgaaaataa gagcgccaac attttggaag cgctgctgtt caattttgac
      661 ttcgacgact tcgatgaccg caaattccgc acgctcaaaa cggagcatca gaattttctt
      721 gagacacgag tcgtcccgct gcttgaaaag ggaaaaggga acatatggat tcagggttca
      781 gccagcaaag tagggacttc ggaatggaac atgacaacgt cgatggtgag ggcgggtcag
      841 gtccaggcct acctgctgga taggaacatc gactcgaccc agatagtagc tgatgcaatc
      901 gggaacaaag tcgcgcttgg acataccaat gatgacgcca gagatcgatc ggtcgtcatt
      961 tgggtctacc caaacgtaac agcggcgaag ccgctgccaa agcaagttcc tccgcgaccc
     1021 cgcatcgggc ccaacaaggt caagaaggtg tatatctacg atcaaacgag tgggattgat
     1081 agaggccagg cgtcaggccg cttcgatgca gatgaagtac tcactattcc aatcagtgga
     1141 ggcataaccg aactcaggaa acaattcgat gcgctgctag cgagtggaca aaccttcgat
     1201 cgcgttctgt ttcaaacgca tggcggtccg gggagaattt ggtttggctc agaagccttg
     1261 aacaaggaga ccctgaaaac gtatttcgcg ggctatacgg gtctattccc gaccgctacc
     1321 cggatctatt tcgatggttg caacgtggcg gagggcggcg atggcacgga tttcttgctc
     1381 gcagcgggct acgtgtttct gaaaattggc ggcggcgaaa cctttgggtg ggtcaatctc
     1441 gggcatggcc ttccgggatg gataccgttc ttcggggggc atacgatcca tttcggcggc
     1501 ggcaacaatt tgaagcggat cagatttttc acaggcggtc agccgaactt tccaggctcc
     1561 tggataccgg cgaggtagtg cgcggggagg gccccaacgc acccgcactc gcacgactat
     1621 taatctggga gttaggctcg gctccgctca cccgctcgcc gaaaaaattc ggcccagcca
     1681 gccgccagcc gctcgcccaa gcgtcgcgcc accgggtggc tactcgggga cgattgaccg
     1741 gaagggcgat aggcgggctt gggcagatcg tcgtattgcc cgcccaaaat atcgcggcat
     1801 gtctgcagcg actccgcaag gctgaccgtc gtgccatgac ccttgtgcca gcgccatcgc
     1861 cgactgctga cgctgctcca gccggcggtc ggccagcacc tcctcgcccg gcaaatcctc
     1921 ggcttccacg agtggcacgg tccgctgcgg gatcaatacg ccgggcgtgg ttgcagcctc
     1981 tgactccacg tgcgtgaatg tctcttattg gcccgaggct gaaatgcctg atcaacccga
     2041 gcatttcagg tcattggggt tgactggaag atgttggcct cggcgatttt cgacgctact
     2101 gaccgcaacc ggactctccc cgccgtcaat tgacgcattg cgagatgttc attcgccccg
     2161 acgttggcta cctcggacac gcgcttagaa aagggattcg cagatcggtg agatagggaa
     2221 tattatcgcc caacatctcg tctactcggc tttgatattg agttccttgg atagccgctc
     2281 gtactttgcg tattcgccgc ggaagaattg cgcgaaatct tcggctgtac cccctacggg
     2341 ctcctgtcct tgcttgaaga agctctcacg gacggcgctg tcggcgacca ccttgttgat
     2401 ctcggcgttg aggcgggccg cgatggctgg cggtgtcccc acgggcacga aaacgccgtg
     2461 ccactggtcg agcaccaggc cgttgatgcc agcttcttga taggtcggca catctggcag
     2521 gctcggcgag cgcgcggcgg tggattgcgc aaggagtcgc agcgtgcccg ccttgtaatg
     2581 cgggattact ggagtcgatc ccagcgaccc gattttcaca tgaccggcga tgagatcgtt
     2641 gatcgcctgc ccgccgccgc ggtatggcac atgcgcaaac ttgacgccgg caatctgcgc
     2701 gaaccactcg gccacaaagt gctgctcatt gcccgttcct cccccgatta catagttcag
     2761 gcccggctgt tgcttcgcca gtgcgatcag ctccgcgatc gaattggccc caagagacgg
     2821 gtgcactgcg agcacgaccg gcaagcgtga tgcgtagatg accggcacaa ggtccttcaa
     2881 ggggtcaata ctcagcttgg agacgtgagc tgcgccagcc acccaatcgg tcgtgacgag
     2941 aaatgtgtag ccgtcgggcg aactcctggc tgccgcctca agtccgatat tgccgccggc
     3001 accggcccgg ttctcaacaa atacttggcg gcccaagctc cgtgacaagg actcgccaat
     3061 gatgcgggcc gctgtgtcgg tcgagccgcc gggcggaaac gggacgatga tacgcaccgg
     3121 ccgcgatgga taggcttgcg accaagcgaa acccgatacc actggcagcg cggcagcgcc
     3181 cacagccagt tgcagaaatt gcctccgcgg aagtttcata ggcgtgcccc ctggtggcgc
     3241 cgacgctagc ccaaatctcc tgcctcaaaa agggggccgc aacggccgga attggcccga
     3301 ggccgaaatg cctgatcaac taggtccctg aaattactgg cgcgccctac gggaatcgaa
     3361 cccgtgtttc ccccgtgaaa gagcgacggc aaaatgagca cgctctggac aagaattagg
     3421 cacggatcaa tgcggccagt cttggtatcg gcggcggatt tgccggtggc acggttcttg
     3481 cgaaatcttt ggcacaggac ctaataattc ggtgtgatct ttttgcggga aattcattat
     3541 caggcgagtt cagaggaggt gcgggtgccg acgatcaaaa tcgaagccga accggcgccg
     3601 ctgcgtatcg atcttacaca tgctgccctc gttatcatcg acatgcagcg cgattttctc
     3661 gagcccgggg gatttggtgc cgcccttggc aacgaagtgt cacggctcga ggtggcaatc
     3721 gagccgtgcc gcaacgtgct cgcggcattc cgcgcgcagg gcgttctcgt catccacacg
     3781 cgcgaaggcc atcggcccga tctcaccgac gcgccgcccc ataaagtcga acgcggcgac
     3841 ccgtctctgc gtatcggcgc tccaggtccg atggggcgca tcttggtgcg cggcgagccc
     3901 gggcacgaca tcattccgat gctttatccg accaagggtg agccggtaat cgacaagccc
     3961 ggcaagggcg cattctatca gaccgacctc gacctgatgc ttcgcaatcg cgctatagat
     4021 accctgttcg tgtgcggtgt caccaccgaa gtatgtgtca acaccacggt gcgcgaggcc
     4081 aacgaccgcg gcttccgctg catcgtgctc agtgattgct gcgcgtcgta ttttcccgag
     4141 tttcacgccg ccggcctcgc catgatcaag gcgcaaggcg gcatcttcgg gtgggtcacc
     4201 gattcgcgcc gcttgctggc ggcgttgcct tcgtgagggg agagatgcga tgacgacaaa
     4261 caagcccaag ctgtgga
//
LOCUS       DATILV010000252         4049 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4403667, whole genome shotgun sequence.
ACCESSION   DATILV010000252 DATILV010000000
VERSION     DATILV010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4049
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4403667"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(26..784)
                     /locus_tag="VLJ17_05865"
     CDS             complement(26..784)
                     /locus_tag="VLJ17_05865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22540.1"
                     /translation="MPGWRDEINQKALARLNTALPAVFPPPVLTHALQRRFTPPMPRL
                     AIDSYWRAHPVRADRLARALAGRSGTPPGWTWRLADEKPARAKRRGRRADDAKRDWLA
                     TNFRVPPAPYREQRYALGPGFCCICGQPVYRFGWHVDLWDRGVNRNAVWHAACVVAWD
                     LWTAPSDHARILKRLQQRRCAETGGRLWKTAEVDHRVPLFRVWREHRDMDWPSLLSFW
                     GLPNLQVINRDAHTAKCAVEATSRRRITDVVETV"
     gene            1440..1643
                     /locus_tag="VLJ17_05870"
     CDS             1440..1643
                     /locus_tag="VLJ17_05870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22541.1"
                     /translation="MADQLDFTQQANDCFRLAESETQSEIKTILMGMAYGWLTFANRH
                     KVTSEGHRAPVDEPTEEPADDLN"
     gene            complement(1926..2186)
                     /locus_tag="VLJ17_05875"
     CDS             complement(1926..2186)
                     /locus_tag="VLJ17_05875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020179132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HSV22542.1"
                     /translation="MGRTEFAAIEDGSIGEASEDMFFRLGIMYSTGAEVPTDYVSAHK
                     WFNLAAMRGNTEAIRLRREIALEMTEAEIAQAQRAARDWLNN"
     gene            complement(2539..>4049)
                     /locus_tag="VLJ17_05880"
     CDS             complement(2539..>4049)
                     /locus_tag="VLJ17_05880"
                     /inference="COORDINATES: protein motif:HMM:NF013173.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="trehalose-6-phosphate synthase"
                     /protein_id="HSV22543.1"
                     /translation="LARLVVVSNRVSVPSGDGAKRAGGLEVALRPALQHNGGVWLGWS
                     GKVGAQDRLRTRAVRHKNIEYVVTDLTKHDYEEYYNGFANRVLWPILHYRLDLAEFAL
                     RDLSGYFRVNDHFATELEKVIEDDDLVWVHDYHLIPIADALRRRGRPNRIGFFLHVPF
                     PPPEVLTSLPKHEQLIPLLMQYDVVGFQTEGDAGNFVRYLISECNQMREMRVFEIAGH
                     QTTLSMNGRQTRIGSFPVGIEPRAFQRLARRNARSPLVKDMMASLGGRVLVIGVDRLD
                     YSKGLIQRLDAFDHFLAGHSEWIGKVTYLQITPKNRSEIPEYAELEEALGSAAGRING
                     KYGEVSWTPIRYVNRVYGRSALAGLYRTARVGLVTPLRDGMNLVAKEYVAAQDPEDPG
                     VLILSRFAGAAIEFRRALLVNPYDPESVAGAIAQALAMPIEERRARHQALLGVISAYD
                     VDRWQQEFLATLRDDGDTTSVPLAPGVTTNPRRRRSENPRSGRPTARLNPAR"
BASE COUNT          849 a         1223 c         1175 g          802 t
ORIGIN      
        1 ccgcagtgag gcggtcgcct gaccctcaga ctgtctccac cacgtccgta atgcgccgtc
       61 gcgatgttgc ctcgacggcg catttcgccg tgtgagcgtc gcgattgatc acctgcaggt
      121 tgggcaggcc ccagaacgac agcagcgacg gccagtccat gtcgcgatgc tcgcgccaca
      181 cccggaacag cggcacgcgg tgatcgacct cggcggtctt ccataggcgt ccaccagtct
      241 cggcgcagcg ccgttgctgc aggcgcttga ggatgcgcgc atggtcgctc ggcgccgtcc
      301 aaagatccca agcgaccaca caggcggcgt gccagaccgc atttcggttc acgccgcgat
      361 cccacaggtc cacatgccag ccaaaccggt agaccggctg accgcagatg cagcagaagc
      421 cgggcccgag cgcatagcgc tgctcccgat acggcgcggg cgggacccgg aagttcgtcg
      481 ccagccaatc ccgcttggcg tcatccgccc tgcggccgcg ccgtttggca cgggcgggct
      541 tttcatccgc gagccgccat gtccacccgg gcggcgtgcc gctgcggcct gcgagcgccc
      601 gagcaagccg atcggctcgc accggatggg cccgccaata ggaatcgatc gcaagccgcg
      661 gcatcggcgg cgtgaagcgt cgctgcaacg catgggtaag cacaggtggc ggaaacaccg
      721 ccggcagcgc cgtattgagc cgcgcaagcg ccttttggtt gatttcgtca cgccaccctg
      781 gcatcggtcc cgccgcttcc aatcgaccgt atagccgcag cggcgtaaac gttttctcaa
      841 cgcagattca accgacgaga caggtcaaac ggcgactaca acgcgtggtc agtggcggat
      901 cgaaggatcg cgcaactcaa cgcatggaat gtgattggcc atcgccaagt aatcgcgccc
      961 gatttgtcgg agcgtaccgc cggcctttgg gtgagacgta gcgaccgccc gtcggaagca
     1021 gctttttgcc atcagtaaat agaaatatga cggttctgct gtattggcat gaattgatct
     1081 ggcagacatg ggaccctcca cgggttcgat tggctcatcc ggtccttgcc aatttgtcgt
     1141 gtgggctatc gctcaggttc acgttgcggt tcatgtcaac gcaagtcttt cggatctggc
     1201 gtctccccgc ctgctatctt aacgtggtta ttggctctgc ggttccgtac tggttgagag
     1261 atacggtttg ccacaacctt gccattaaaa ttccaattat tcacatactt tcgcctttgc
     1321 cgggaacaac aaccctagtt acgaccagag tgtgtccagc cgaagttaat ccacccctcg
     1381 cccgtcaacg ggggattgta ccggacgcgc tccaggaagt tgccgacgag gaggatgctg
     1441 tggcggacca attagacttc acacaacagg caaatgattg tttccgattg gcggaatccg
     1501 agacgcaatc cgagataaag acgatcctga tggggatggc atatggctgg ctgacgttcg
     1561 caaaccgtca caaagtgacc agcgaagggc atcgggcacc ggtcgacgaa cccaccgagg
     1621 aaccagccga cgatttgaat tagtgtaccg ctgcgtacct gtgcggccgg caaacggata
     1681 ttcggtgtga atgctgaggt gcggcggcga gctctgcggt gtcagtctgt ggaggggaac
     1741 gctccggcgc ggctcgcaag agctgcgtga aacgggcctc gaagaagcag gaaccgaacg
     1801 gcattggcga gctttgcgcc gctgagctca actttgtggt ttcggagagc ggttaaagaa
     1861 cctatcgaaa gaaccgcctc cagtagagag attagcagcg ctgagaaacc ggccaccact
     1921 ttgtgtcagt tattgagcca atcgcgtgcg gcgcgctgtg cctgcgcaat ctcggcttcg
     1981 gtcatctcca aggcaatttc gcgcctcagc cggatcgcct cggtgttgcc gcgcatggct
     2041 gcaagattga accatttatg cgctgacaca taatcggttg gcacttcggc gccggttgag
     2101 tacatgatgc caagtcggaa aaacatgtct tccgatgctt cgccgatgct tccgtcttcg
     2161 atcgcggcaa attccgttcg tcccattttg gcctccccgg ccccttgcaa ggtgacgctg
     2221 tccaacttct ttccaactcc cgttccggag cggcgcaatc atccacacca gttttgaacc
     2281 gcactttaaa caacgcgatg aatcgctaat gaacgctaca aattcgcgtc ggcgacgcaa
     2341 tatgtcctta agcatcgaaa gctctgtaat tttggctatt tctggattcg gtgaagatgc
     2401 gctaacggtg acgattgaga acggggtaac tatgtgggca tccggtcgaa actctcgtgc
     2461 tgaaaaagcg gcaagcagca gagcgccggc ggggcccgcg agcgtcctta aggcctcgat
     2521 caaagtttga ccgccgtttt agcgcgcagg attcaacctt gccgtaggtc tgccggagcg
     2581 ggggttctct gacctgcggc ggcgcgggtt cgttgtcaca ccgggggcca aaggcaccga
     2641 cgttgtgtcg ccgtcatccc gaagcgtggc aaggaattcc tgttgccacc gatccacatc
     2701 ataggcggaa atcacgccaa gcagtgcctg gtggcgtgcg cgccgttcct cgatcggcat
     2761 ggccagcgct tgcgcgatcg caccggcgac agattccgga tcataggggt tgaccagcag
     2821 agcgcgtcgg aattcgatcg cggcgccggc aaagcgagac aggatgagaa cccccggatc
     2881 ctcgggatcc tgagcagcca catactcttt cgccaccagg ttcatgccat cgcgcaacgg
     2941 cgtcaccaag ccgacacgcg ccgttcgata gagtccggcg agcgccgacc ggccatagac
     3001 ccggttgaca tagcggatgg gggtccatga cacctcgccg tatttgccgt tgatgcgacc
     3061 ggcagcagac cccaaggctt cttccaattc ggcatattca ggaatttcgg aacggttctt
     3121 cggcgtgatc tgcaggtatg tcaccttgcc gatccattcg ctgtgtccgg cgaggaaatg
     3181 atcgaatgca tcaagacgct ggatcaggcc cttggaatag tcgagacgat caaccccgat
     3241 aacgaggacg cggccaccaa gacttgccat catatccttc accaggggag accgcgcatt
     3301 gcggcgtgcc aatcgctgaa aggcgcgcgg ctcgataccg accggaaagc ttccgatccg
     3361 cgtctgtcgc ccgttcatgc tcagggtggt ctggtgcccg gcgatctcga atacccgcat
     3421 ttcccgcatc tggttgcact cagaaatcag gtagcggacg aaattaccgg catcaccttc
     3481 ggtctgaaag ccgacaacgt catattgcat cagtaatgga attagctgct catgcttggg
     3541 cagcgacgtc agcacctcgg gtggaggaaa cggaacatgt aggaaaaatc cgatccggtt
     3601 ggggcgccct cgccgccgca acgcgtccgc gatgggaatc aagtgatagt catggaccca
     3661 gacgagatcg tcgtcctcaa taactttttc gagctctgtc gcaaaatgat cattgacccg
     3721 gaaatagcca ctgagatccc tcaacgcaaa ctcggcgagg tccagccgat aatgcagaat
     3781 cggccacaac acacgattgg cgaagccatt gtaatattcc tcgtagtcgt gcttcgtcag
     3841 atcggtgaca acatattcaa tattcttgtg cctgacggcg cgcgtcctta acctgtcctg
     3901 cgctccgacc ttgccgctcc atccgagcca cacgccaccg ttatgctgga gcgccggccg
     3961 caaggcgacc tcgagccctc cggcacgctt ggcaccatcc ccggagggaa ccgaaacgcg
     4021 attcgagacg accactagtc gtgccaata
//
LOCUS       DATILV010000253         2841 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1082234, whole genome shotgun sequence.
ACCESSION   DATILV010000253 DATILV010000000
VERSION     DATILV010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2841)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2841)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2841
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1082234"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..538
                     /locus_tag="VLJ17_05885"
     CDS             <1..538
                     /locus_tag="VLJ17_05885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012758142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSV22544.1"
                     /translation="AKIVETALSRFKSIDALVNNAGIFFTKPFTDYTAEDFKSLVSTN
                     VEGFLYVTQLSIKQMLAQKTGGSIVTITAALARNPIRGITAAVPMITKGGLETITKHL
                     AMEYAKDGIRVNAVAPGAVYTPLHRDTPKDVMESLSPMGRPSTVKDITDAVMYLTDAA
                     TVTGDILYVDGGAHFGRW"
     gene            557..679
                     /locus_tag="VLJ17_05890"
     CDS             557..679
                     /locus_tag="VLJ17_05890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22545.1"
                     /translation="MTTDSTIAEDRLAKLGIHLPDAPTPFGAYVPAVQTRTSFS"
     gene            773..1720
                     /locus_tag="VLJ17_05895"
     CDS             773..1720
                     /locus_tag="VLJ17_05895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007629507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV22546.1"
                     /translation="MSEEIKYDRRRFLAIAAMSVATAESVLIGSADAQSSKTKPAALP
                     TIKPGTNKSFSSLKQIDAGLLNVGYADAGPAAGPVVILLHGWPYDIHSYVDVAPLLAS
                     AGYRVIVPYVRGYGSTRFLLSDTLRNGQPSALAVDIIAFMDALKIDKPIIAGFDWGAR
                     TANIIAALWPERCKAMVSVSGYLIGSQEIGKMPLPPKAELQWWYQYYFATERGRAGYD
                     KYRHDFAKLIWQLASPKWVFDDATFARSAASFDNADHVSIVVHNYRWRLGLAEGEPKY
                     DDLEKRLAASPVITVPTITLEGDANGAPHPDASSLAIFD"
     gene            complement(1732..>2841)
                     /locus_tag="VLJ17_05900"
     CDS             complement(join(1732..2456,2456..>2841))
                     /locus_tag="VLJ17_05900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611411.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HSV22547.1"
                     /translation="FLRKMVSSGKGAARKLLHGRILLQADASPEGMRYTNEAIAEALG
                     VSLSTIHRVRQQFVEESFEAALNPRRPRRRPDKVTIQGEVEQQLIALACGEPPRGHGR
                     WTVRLLADRMVELGYVARVSRETVRQGVKKNDLNLWQVKTWCIPPKANADFVYHMEDV
                     LRVYHLPYDRHYPVVCMDEASKQLIGEVNAPLPLRSGRIKCEDYEYERKGVCNQFMCC
                     EPLRGWRHVRVTARRTKRDWAECIRELVDVHYPQATRIRLVLDNLNTHTGASLYEAFP
                     PAEARRLLDRLEFHHTPKHASWLNMAEIEIGVLNSQCLDRRLDNVDWLRSEISAWEGR
                     RNKQQVKIHWSFTIAVARHKLKKLYPVIENSNPPK"
BASE COUNT          584 a          862 c          774 g          621 t
ORIGIN      
        1 cgccaaaatc gtcgagacgg cgctgtctcg cttcaagtcg atcgacgcac tggtcaataa
       61 cgcaggaatc ttcttcacca agccgttcac ggactacacg gccgaggact tcaagtcact
      121 cgtctcgacg aacgtcgagg gcttcctgta cgtcacccaa ctctccatta agcaaatgtt
      181 agcgcagaag accggcggga gcattgtcac gatcacggcg gcccttgctc gcaacccgat
      241 ccggggcatc acggcggcgg tgccgatgat caccaaaggc ggtcttgaaa cgatcaccaa
      301 gcaccttgcg atggagtacg cgaaagacgg catccgcgtg aacgccgtcg cgccgggcgc
      361 cgtctacacg ccgcttcacc gggacactcc gaaggacgtg atggagagcc tgtcaccgat
      421 gggtcggcct tcgacggtca aggacatcac ggatgcggtc atgtacctga ccgacgccgc
      481 aaccgtcact ggtgacatcc tgtacgtcga tggcggcgct catttcggcc gctggtaatt
      541 ggacggagct ttcgtcatga ccacagactc aacaatcgcc gaggaccgtc tcgccaagct
      601 cggcattcat ctgccggatg cgccaacgcc cttcggtgcg tacgtgcctg ccgttcagac
      661 gagaacctcc ttttcctgag cgggatgctc gccacctcgg ccgatcagca catcgccgct
      721 gcatgggaag cgtttgttct caactgcttt gaatccaacg ggagagcaat ctatgtccga
      781 agaaattaaa tatgatcgcc gccgcttttt ggccattgcg gccatgagcg ttgcgaccgc
      841 agagtctgtc ttgatcggct ctgcggacgc gcaatccagc aagacaaaac cggcggctct
      901 gcccacaatt aagccgggga cgaacaagtc gttcagctct ctgaagcaga tcgatgccgg
      961 cctcctgaat gttggatacg ctgacgccgg ccccgcggct ggtcctgtgg tcattcttct
     1021 gcacggctgg ccctacgata ttcacagcta cgtcgatgtc gcgcctttgc tggcatcggc
     1081 gggctacagg gtgatcgtcc cgtatgtccg cggctatggt tcgacgcgct ttcttttaag
     1141 cgacacgctc cgcaatggcc agccgtcggc gctcgctgtc gatatcatcg ccttcatgga
     1201 tgctctcaag atcgacaaac caatcatcgc cggttttgat tggggagcgc ggaccgccaa
     1261 catcatcgcg gcgctctggc cggagcgctg caaggccatg gtctccgtga gcggttatct
     1321 gatcggcagc caagaaattg gcaagatgcc gttgccgcca aaggctgagc tccaatggtg
     1381 gtatcaatat tattttgcca cggagcgcgg ccgcgccggc tatgacaaat accggcatga
     1441 ttttgccaag ctcatctggc agctcgcttc accgaagtgg gtcttcgatg atgccacgtt
     1501 cgctcgcagc gcagcgtcct tcgacaacgc ggatcatgtc agcatcgtgg tccacaatta
     1561 ccgctggcgg ctcggcctgg ctgaaggcga gccgaaatat gacgatttgg aaaagcggct
     1621 tgccgcaagt cctgtgatca ccgtgcctac catcaccctg gaaggcgacg ccaacggcgc
     1681 gccccatccg gacgctagta gtctggcaat cttcgattga caggttcctt ttcacttggg
     1741 cggattgctg ttttcaatga ccggatagag ttttttgagt ttatgccggg cgacggcgat
     1801 ggtaaaactc caatggattt tgacctgttg tttgttacgc cgcccttccc acgcgctgat
     1861 ctcgctgcgt aaccaatcaa cattatccag tcggcgatcg aggcattgac tattcaaaac
     1921 gccgatttcg atttccgcca tattgagcca actggcgtgc ttgggggtgt gatggaactc
     1981 caagcgatcc agtaaccgtc gtgcttcagc cggcggaaac gcctcgtaca aggatgctcc
     2041 cgtatgagtg tttaggttat cgagcaccaa acgaatgcgt gtggcttgag gataatgcac
     2101 atcgaccagc tcacggatgc attcggccca gtcccgcttg gtccggcgcg ccgtgactcg
     2161 tacatgacgc catcctcgca gcggttcgca acacataaac tgattgcaca cccctttgcg
     2221 ctcatattca tagtcctcgc atttgatacg cccagagcgc agcggcaagg gtgcgttgac
     2281 ctcgccaatc aattgtttgc tggcttcgtc catgcacacc acgggatagt ggcgatcata
     2341 gggcaaatgg tagacccgca gaacgtcctc catatgatac acaaagtcgg cattggcttt
     2401 gggtggaatg caccacgttt tcacctgcca aagattgaga tcgttttttt taacgcctgg
     2461 cgcacagttt cacgcgagac gcgggccaca tatcccagct ccaccatccg atccgccagc
     2521 aaacgcacgg tccaacgccc gtgtcccctc ggcggctcgc cgcaggccag ggcgatcaat
     2581 tgctgttcca cctctccttg gatggtcact ttgtccggcc gcctcctggg ccgacgcggg
     2641 ttgagggccg cctcaaaact ctcttctacg aactgttgtc gtacacggtg gatggtggag
     2701 agactcactc ccaacgcctc agcaatggct tcgttggtat atctcatgcc ttccgggctc
     2761 gcatccgcct gcagcaaaat acggccatgg agcagtttgc gagcggctcc cttgcccgac
     2821 gaaaccattt tccgtagaaa a
//
LOCUS       DATILV010000254         3810 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2361107, whole genome shotgun sequence.
ACCESSION   DATILV010000254 DATILV010000000
VERSION     DATILV010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3810)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3810)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3810
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2361107"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..3030)
                     /gene="uvrA"
                     /locus_tag="VLJ17_05905"
     CDS             complement(<1..3030)
                     /gene="uvrA"
                     /locus_tag="VLJ17_05905"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018265660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HSV22548.1"
                     /translation="MTDLFDNRPRRNLDGGRVISIRGAREHNLKNIDLEIPRDRLVVF
                     TGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQ
                     KTTSKNPRSTVGTVTEIYDYMRLLWARIGIAYSPATGLPIESQTISQMVDRVMALPEG
                     TRLYLLAPVVRGRKGEYRKELAEYLKKGFQRVKIDGAFYEIASAPALDKKFAHDIDVV
                     VDRVVVRPDIAQRLAESFEQALKLADGIAVVEFADAAPSPPAGEGRGEGSGDRGTAVP
                     QSTTLAPQGGREKKGRAKETKLATAAAADAQRIMFSEKFACPVSGFTISEIEPRLFSF
                     NNPFGACPACGGLGIEQKIDAELIIPDKSATLRKGAIAPWARSTSPYYTQTLEALAKF
                     YKFTLDSKWKDLPKKVQDAILYGSGEDAIRFVYDDGLRSYETKKPFEGVITNLERRFR
                     ETESEWAREELTKYFTDIPCSVCHGFRLKPEALAVKIAGCHIGEAAEMSVKRAGQWFT
                     ALPKQLSAKHNEIAGRVLKEIRERLKFLGDVGLEYLTLARASGTLSGGESQRIRLASQ
                     IGSGLTGVLYVLDEPSIGLHQRDNARLLETLKRLRDLGNTVIVVEHDEDAIRTADHVV
                     DVGPGAGIHGGKIVAAGTPADVMANKHSLTGQYLTGALTIDMPERRTINPRRLLTVIN
                     ARGNNLKNVTAEIPLGVFTCITGVSGGGKSTLLIDTLYKAVARKLNNASEGPAAHDRI
                     EGLEHIDKIIDIDQSPIGRTPRSNPATYTGAFTPIREWFAALPESKARGYEPGRFSFN
                     VKGGRCEACQGDGVIKIEMHFLPDVYVTCDVCKGKRYNRETLDVLFKGKSIADVLDMT
                     VEEALDFFKAVPRVREPLALLHRVGLDYIHVGQQATTLSGGEAQRVKLAKELSKRATG
                     RTLYILDEPTTGLHFHDVKKLLDVLHELTDQGNTVVVIEHNLEVIKTADWIIDLGPEG
                     GDGGGEIVATGTPDDIIKVSRSYTGKFLAPVLARREAK"
BASE COUNT          698 a         1149 c         1188 g          775 t
ORIGIN      
        1 cttggcctct cgtcgtgcca gcactggcgc cagaaacttc cccgtatagc tgcggctcac
       61 cttgatgata tcatccgggg tgccggttgc gacgatctcg ccgccgccat caccgccttc
      121 ggggcctaaa tcgatgatcc agtcggcggt cttgatcact tcgagattgt gctcgatgac
      181 aacgaccgtg ttgccctggt cggtcagttc gtggagcacg tccaaaagct tcttcacgtc
      241 atggaagtgc aggccagtgg tcggctcgtc cagaatgtag agcgtgcggc cggtagcgcg
      301 ctttgacagt tccttggcga gcttgacgcg ctgcgcctcg ccgcccgaca gcgtcgtcgc
      361 ctgctggccc acatggatat agtcgaggcc gacacggtgg agcagggcga gcggctcgcg
      421 cacgcgcggc actgccttga aaaaatccaa cgcctcctcg accgtcatgt cgagcacgtc
      481 ggcgatcgac ttccccttaa acagcacgtc gagcgtttcg cgattatagc gcttgccctt
      541 gcagacgtcg caggtgacgt aaacgtcggg cagaaagtgc atctcgatct tgatgacgcc
      601 gtcgccttga caggcctcgc agcggccgcc cttgacgttg aaagagaagc ggcccggctc
      661 gtagccacgg gctttggact ctggcaaggc cgcaaaccac tcgcggatcg gcgtgaacgc
      721 gccggtgtag gtcgccgggt tcgaacgcgg ggtgcgcccg atcggcgact ggtcgatgtc
      781 gatgatcttg tcgatatgct ccaggccctc aatgcgatca tgcgcggcgg gaccctcgct
      841 cgcattgttg agtttgcgcg ccaccgcctt gtagagcgtg tcaatgagga gcgtcgactt
      901 gccgccgccc gacaccccgg tgatgcaggt gaagacgccg agcggaattt cggcagtaac
      961 atttttcagg ttgttgccgc gcgcattgat gaccgtgagc agccggcgcg gattgatcgt
     1021 gcgccgctcc ggcatgtcaa tggtaagcgc gccggtgaga tattggccgg tcagcgaatg
     1081 cttattcgcc atgacatcgg cgggcgtgcc tgccgccacg atcttgccgc cgtggatgcc
     1141 ggcccctggg ccgacatcga cgacgtggtc ggcggtgcgg atcgcatcct cgtcatgctc
     1201 gaccacaatt acggtgttgc cgaggtcgcg cagccgcttg agggtttcga ggagccgcgc
     1261 attgtcgcgc tggtgcaggc cgatcgacgg ctcatcgagc acgtagagta cgccggtcag
     1321 gccggagccg atctgcgagg ccagtcggat gcgctggctc tcgccgcccg acaacgtgcc
     1381 ggaggcgcgg gcgagcgtca gatattcgag cccgacatcg cccaagaact tcagccgttc
     1441 gcggatttcc tttaacaccc gcccggcaat ctcgttgtgc ttggcgctga gttgcttcgg
     1501 cagcgcggtg aaccattgac cggcgcgctt cacgctcatc tcagccgcct cgccgatatg
     1561 gcagcctgcg atcttcaccg ctagcgcctc gggcttgagg cgaaagccat ggcagacgct
     1621 gcacgggatg tcggtaaaat atttggtcaa ctcctcgcgg gcccattcac tctcggtctc
     1681 gcgaaagcga cgttccaggt tggtaatcac accctcgaac ggcttcttag tttcgtagga
     1741 acgcaagccg tcgtcataga cgaagcggat cgcatcttcg cccgagccat agaggatggc
     1801 gtcctgcact ttcttgggga ggtccttcca tttggagtcg agggtgaact tatagaactt
     1861 agcgagcgcc tcgagggtct gggtgtagta gggcgatgtc gagcgcgccc acggcgcgat
     1921 ggcacccttg cgcaaggtag cgctcttgtc cggaatgatc agttcggcgt cgatcttttg
     1981 ctcgattccg agcccgccgc aggctgggca ggcgccaaac gggttgttga aggagaatag
     2041 ccgaggctcg atttccgaaa tcgtgaaacc agagaccggg caggcgaatt tctcggaaaa
     2101 catgatgcgc tgggcatcgg ccgcagcagc ggtggcgagc ttggtttcct tggcgcgccc
     2161 cttcttctcc cttcctcctt gtggggcgag ggtcgtggac tggggcacgg ccgtgccacg
     2221 atcccccgaa ccctcacccc gcccctcccc cgcaggaggg gagggagcag catccgcgaa
     2281 ttccaccacc gcgatgccgt cagcaagctt gagcgcctgt tcgaagcttt cggcgagccg
     2341 ctgcgctata tcggggcgca ccacgacccg atccacgacc acgtcgatgt cgtgggcaaa
     2401 tttcttgtcg agtgccggcg cggacgcgat ctcgtagaag gcgccatcga tcttgacccg
     2461 ctggaacccc ttcttgagat attcggcgag ttccttccgg tactcgccct tgcggccgcg
     2521 caccaccggg gcgagcaggt agagcctcgt cccttccggt agtgccatca cccgatcgac
     2581 catttgcgag atggtctggc tctcgatcgg caggccagtg gcgggcgaat aggcaatgcc
     2641 gatgcgggcc cacaagaggc gcatgtagtc ataaatttcc gtgacggtgc cgacggtgga
     2701 gcgcgggttc ttcgaggtgg tcttctgctc gatggagatc gccggagaca gcccatcgat
     2761 ctggtcgacg tccggcttct gcatcatctc caggaactgg cgcgcgtagg ccgacaggct
     2821 ttccacatag cgccgctggc cttccgcata gatggtatcg aaggcgaggg aggatttgcc
     2881 ggagcccgac aggccggtaa ataccaccag ccggtcgcgc gggatttcga gatcgatgtt
     2941 cttgagatta tgctcgcggg cgccgcggat cgagatcacg cggccgccat cgagattgcg
     3001 gcgcggacgg ttgtcgaaca ggtcggtcat gccaaatttt ccgggcgcgc gatgattttg
     3061 gcggtcgtgc cggggcacac gacggcgatc ccgccggccc aaacctagtg gctgcggatg
     3121 ggtttcgcca gtgcgcgcag gtgcgatctc cccttcgtaa tcccggtatg tggacaagtc
     3181 gccgggccgc acaatctgcg cgctcccaaa caaaccttgc cccgactgta agctaagaat
     3241 ttacgtcgtt gacgggggct tgattatacg ggttggtcgc tgcgcgctcc tcaccccgtg
     3301 gatggcgcat cagccgcatt ttgattttat tttcctcggc tgggcgaaag cggaatgaaa
     3361 agggccggcc atattgccgg ccctttctcc tcagcgtgag cccccagctc accaacgtcc
     3421 aaataaagag ttgatggcaa ttttctccag tatgctactt catcgcctcg gaaaaagctg
     3481 tcacacttgc gcaacaggcg gcggagatta aattggggcc ctcctttcaa tcgcccgaat
     3541 ttagccgcgg ccccaacacg tctgcgcaca ttccacgacg cgcctcaaaa tgaaatcatc
     3601 tgagccctgt atttcataac ctgaattcac ttggaccttg tgtcaggcgg ccgtcggtgg
     3661 taagaacaaa aaaggaacac ggcgatgatg ccgtcttaca gcagccctgc gggcgaagca
     3721 gcgtgggtaa aaaaagctgt gtgggtaaca agggaaattg tgggtaacac gacttggcgg
     3781 cgaggtcagg gtcgcgtacg agcgggcttt
//
LOCUS       DATILV010000255         6852 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_570949, whole genome shotgun sequence.
ACCESSION   DATILV010000255 DATILV010000000
VERSION     DATILV010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6852
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_570949"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            153..392
                     /locus_tag="VLJ17_05910"
     CDS             153..392
                     /locus_tag="VLJ17_05910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22549.1"
                     /translation="MNTNMKVMLSAFGIAALLASPAIAKTVPHHSVAPSAAYIPYDAR
                     ASVAPYGAFEGGPYTPSRPAPAHGVSPDFQGGHPE"
     gene            complement(513..1802)
                     /locus_tag="VLJ17_05915"
     CDS             complement(513..1802)
                     /locus_tag="VLJ17_05915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HSV22550.1"
                     /translation="MTLIEWFILLAVFGFLLMSFFFSGSETALMASSRGTMLRLAKDG
                     NANASIVTGLLENRERLLGAVLIGNNLATIVSSSLATDLLHEWFGEIGVVYASLVMTV
                     LIILFCELLPKTAAINSPDRYALSVAPTMRRVVWVLGPVLTGADWLVRRMLMMIGVKS
                     GQAEPLLPGHERLRGAVDLLHREGSVEKQDRDMLGGLLNLRDLTVADVMIHRTEVITA
                     DAGEPPEKVVEVLLKELVTRVPLWRGTPENIVGILHVKDLLRAIQEVGGDPKKVDIMA
                     LVRPAWFVPEIRTLTEQLKAFRRRRTPLAIVVDEYGEFMGIVTLEDILEEIVGDITDE
                     HDVEVPGLRPQPDGTVNVDGSVPIRDLNRAMDWNLPDTEATTIAGLVIHEARSIPEPG
                     QSFTFHGFRFEVLRRNRNRLETLRITPVAQKAVAKAS"
     gene            complement(1799..2932)
                     /gene="aroB"
                     /locus_tag="VLJ17_05920"
     CDS             complement(1799..2932)
                     /gene="aroB"
                     /locus_tag="VLJ17_05920"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009025431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003856 - 3-dehydroquinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HSV22551.1"
                     /translation="MTAPLRPADPTIVNVALGNRAYDIVIGRNQMAVLGARVSALKPG
                     ASAAIVTDDTVAGLHLEATEAALATAGLATRCVVVGAGEATKSFAGLERVCEALIAAR
                     IERGDLVVALGGGMVGDLAGFAAAVVRRGLDYIQLPTTLLAQVDSSVGGKTAINSHNG
                     KNLIGAFYQPILVVADTAVLDTLPPRQFRAGYAEIVKYGLLGDARFFAWLEANVKEVF
                     AGGAARERAIATSCRMKAAIVARDERETGDRALLNLGHTFGHALEAAAGFSNRLLHGE
                     AVALGMALAAEFSVRLGILAPEQAARARRHLADAGLPVRLADVAGGVPNADRLMDLMA
                     QDKKVRRGKLIFILLRDIGAAYVAPDVDPALLRAFLVEKLDAQ"
     gene            complement(2959..3555)
                     /locus_tag="VLJ17_05925"
     CDS             complement(2959..3555)
                     /locus_tag="VLJ17_05925"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018452923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HSV22552.1"
                     /translation="MNDAALPHPMGPAPRDVAITAALGRGSIVLVGMMGAGKSSIGRR
                     LAARLGIPFADADAEIELAAGMSIADIFEAHGEPSFRSGEARVIARLLEHGPQVLATG
                     GGAFMNPQTRANIHGKGISVWLKAEPDVLARRLRRRSDRPLLKTADPMATLTDLLSER
                     NPIYGEANIVVVSRDVSHEVIVDEIVSALRCKLGIAEA"
     gene            3783..4448
                     /locus_tag="VLJ17_05930"
     CDS             3783..4448
                     /locus_tag="VLJ17_05930"
                     /inference="COORDINATES: protein motif:HMM:NF019430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HSV22553.1"
                     /translation="MSTQDRINEMPASGSQVGRAQPNRAYIVAAIAGVAVIGVFANSS
                     LGQGLGHRMVENVPGLAAATTFEDGLGPSFGPVFATADGQGGFLSGAIETIVETRADR
                     MIRHLAIEIDATAEQQDKLRAVVRGAVKDLLPVREKVLAARATARELLTQQAVDRAAI
                     EKLRADQIAIHDAASKRLVQAVADAAEVLTPEQRRKLNTMLPPRAGHWGRGPWNWGGF
                     GRN"
     gene            4482..5168
                     /locus_tag="VLJ17_05935"
     CDS             4482..5168
                     /locus_tag="VLJ17_05935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004434693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV22554.1"
                     /translation="MTDRILLIEDDERLAEMVKNYLGEFGFSVTVAHSGSAGIALYRR
                     DCFDVLILDLMLPDMDGLEVCRQIRADAEARILMLTARGDAMDRVVGLEMGADDYLAK
                     PFEPRELLARLRSILRRAKGDSKLKVLRFGRLDIDAGAREARLDGEPRTLTSYQFALL
                     LGLARHAGRVMSREALMDIVKNERLEAFDRSIDVHISRIRAAIEDDPKRPRRIITVRG
                     AGYVFAKSQE"
     gene            5172..6404
                     /locus_tag="VLJ17_05940"
     CDS             5172..6404
                     /locus_tag="VLJ17_05940"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSV22555.1"
                     /translation="MRRLYQKIYLVFLASLVAVVTIAGLFWRLGQVGSPYGPALELVA
                     ELASAALPPVDALPQVQRQAVERLGRRLRADIALFDRDRSPIASIGRPLPQPTNQNGG
                     WLRVRGGAAWSFQLPDGRWIVARTLLRPPVQGLVFFLGAMAIAIAIFAYPVVRGLTGR
                     IERLQRGVETLGAGNLATRVAVEGRDEVAQLAASFNRAAARIEELVGAHRLLLANASH
                     ELRTPLSRIRLGLELFEAKPEAKTKAAIARDIAELDDLIEEILLASRLDVAAVPPTVE
                     EVDLLALVAEECAHYEGCALNGESVLLRGDARLLRRLVRNLLDNAQRYGKPPIRVELR
                     RKRSQASLSVIDAGDGIAPSEREHVFLPFYRLGGDRKGAGLGLALVRQIARLHGGDAV
                     ATARPDARSCIVIQLPIP"
     gene            6584..6736
                     /locus_tag="VLJ17_05945"
     CDS             6584..6736
                     /locus_tag="VLJ17_05945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008144572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22556.1"
                     /translation="MPSLIKLLAVVGVIAGLGYAAMFALATLVDPKTREMVVTVPPDR
                     FVKQQH"
BASE COUNT         1298 a         2166 c         2150 g         1238 t
ORIGIN      
        1 gccggcgccg gcacatgggc tgaaccccga cttccagagc ggccacccgc aataatttct
       61 ggttgccgct atctgccggg cggtaaaccg cccggcaaat tttttgtgct tacgggcggc
      121 ggggctgaga acccaaagat aggaggttgg atatgaacac gaacatgaaa gtgatgctgt
      181 ctgcatttgg cattgctgcg ttgctggcat ctcccgccat agcgaagaca gtgccgcatc
      241 atagcgttgc gccgtcagca gcgtatatcc cgtatgacgc gcgcgcgtct gtagcgcctt
      301 acggagcttt cgaaggcggg ccatacacgc cgtcgcggcc ggcgccggca catggggtga
      361 gccccgactt ccagggcggc cacccggaat aatttctggt tgctgcgatc tgccgggcgg
      421 ttcaccggcc ggcagatatt tttttgtgcc tttcacaagg gccatccggg gggcatagca
      481 cctgcgggtc gaggcctgcc aaggctgacg tctcacgacg ccttcgccac tgccttttgg
      541 gccaccggcg tgatccgcag cgtctccagg cgattgcggt tgcggcgcag cacctcgaaa
      601 cggaagccat ggaacgtgaa gctctggccg ggctcaggga tcgagcgcgc ttcgtggatc
      661 acgaggcccg cgatagtggt cgcttccgtg tctggcaggt tccagtccat ggcacggttg
      721 aggtcgcgga tcggtaccga gccgtctacg ttgacggtgc cgtcgggctg tgggcgcagg
      781 ccgggtactt ccacgtcgtg ctcatcggtg atgtcgccaa cgatctcttc gagaatgtcc
      841 tccagggtga cgatccccat aaactccccg tattcgtcga ccacaatggc gagcggagta
      901 cgacggcggc gaaacgcctt gagctgctcg gtgagcgtcc gaatttccgg cacgaaccag
      961 gccggacgga cgagcgccat gatgtcgacc ttcttaggat cgccgccaac ttcctggatg
     1021 gcgcgtagca gatccttcac gtgcaggatg ccgacaatgt tttcaggcgt accgcgccac
     1081 agcggaacac gcgtcaccag ctccttgagc aagacctcga caaccttttc gggcggctcg
     1141 ccggcgtccg ccgtgatcac ttcggtgcgg tggatcatga catccgctac cgtcaaatcg
     1201 cgcaggttca gaaggccgcc caacatgtcg cggtcctgct tctcgacact gccctcccga
     1261 tgcaacagat cgacggcacc gcgtagacgc tcgtggccgg gcagcagcgg ctcggcctga
     1321 ccagatttca caccgatcat catcagcatc cggcgcacca gccaatccgc cccggtgagc
     1381 accggaccga gaacccacac gacgcgtcgc atcgtcggtg cgaccgacaa cgcatagcga
     1441 tccggcgaat tgatcgccgc ggtcttgggc agcaattcgc aaaacaagat gatcagtacc
     1501 gtcatcacga ggctggcgta aaccacgccg atctcgccaa accattcatg cagcagatcg
     1561 gtggcaagcg aagacgacac gatcgtcgcc agattgttgc cgatcagcac ggcgccgagg
     1621 aggcgttcgc ggttctccag caggccggtg acgatggagg cgttggcgtt gccgtccttg
     1681 gcaaggcgca gcatggtgcc gcgtgacgat gccatcagcg cggtttcgct tccggaaaaa
     1741 aagaacgaca tcagcagaaa gccgaagacc gccagaagaa tgaaccactc gataagcgtc
     1801 attgtgcgtc aagcttttcg acaaggaagg cgcgcagcag cgccggatcg acatcaggcg
     1861 caacataagc agccccaatg tcgcgcagaa gaatgaaaat gagctttccg cgcctcactt
     1921 tcttgtcttg cgccatcagg tccatcagcc gatccgcgtt cggtacgccg ccggccacat
     1981 cggcgagcct gaccggcagg ccggcgtccg ccaagtgccg ccgcgcgcgc gcggcctgct
     2041 ccggcgcgag gatgccgagc cggacggaaa actccgcagc gagcgccatc ccgagtgcga
     2101 ctgcttcccc atgaagcagc cgattggaaa atccggccgc cgcttcgagt gcgtgcccga
     2161 aagtatggcc gaggttgagc agcgcacggt caccggtctc gcgctcgtct cgcgcgacga
     2221 ttgcggcctt catccggcaa ctggtcgcga tcgcgcgctc gcgtgccgcc ccgccagcga
     2281 acacttcctt cacattggct tcgagccagg cgaagaatct agcatcgcca agcaagccat
     2341 atttgacgat ttccgcatag ccggcgcgaa actggcgcgg cggcagtgtg tcgagcaccg
     2401 ccgtatcggc caccaccagg atcggttggt agaacgctcc aatcaggttc ttgccattgt
     2461 gcgaattgat cgctgttttg ccgccaactg aggaatcgac ctgcgccagc aatgtcgtcg
     2521 gcagctggat ataatcaagg ccgcgacgga ccacggcggc cgcgaagccg gcgaggtccc
     2581 ccaccatgcc gccgccgaga gccaccacga gatcgccgcg ctcgatcctc gcggcgatca
     2641 aggcttcgca gacgcgttcg agacccgcaa agctcttcgt agcctctccg gccccgacga
     2701 caacgcagcg cgttgccagc ccggccgtcg cgagcgccgc ttctgtggct tcaaggtgaa
     2761 ggcccgcaac ggtatcgtcc gtcacgatcg cggcgctcgc tcccggtttg agcgccgaca
     2821 cccgtgctcc aaggaccgcc atctgattgc gcccgatcac gatgtcatag gcacggttac
     2881 cgagcgcgac gttgacgatg gtggggtctg cgggccgcag cggtgccgtc atggtgggtt
     2941 ctttcgttgt gcccgacatc atgcctcggc gatgccgagc ttgcagcgca gggcactcac
     3001 gatctcgtcg acgatgacct cgtgggacac atcccgcgac accacgacaa tattggcttc
     3061 accatagatt ggattacgct cggagagaag gtccgtcagt gttgccatcg gatcggcggt
     3121 cttgagcaag ggtcggtcgc tgcgccggcg cagccgtcgc gccagcacgt ctggctcagc
     3181 cttgagccac acggatatgc ccttgccatg aatattggcg cgggtctgag gattcatgaa
     3241 cgcacccccg ccagtcgcca gcacctgggg gccatgttcg agcaatcgcg cgatcacacg
     3301 cgcctcaccg gaacggaatg aaggttcacc atgagcctcg aagatatccg caatcgacat
     3361 gccggcggcc agctcgatct cggcatccgc atccgcaaac ggaatgccga gccgcgctgc
     3421 gagccgccgg ccgattgagg acttgcccgc ccccatcatg ccgaccagca caatggagcc
     3481 tcgcccaagc gcggccgtga tcgccacgtc gcgcggtgct ggacccatag ggtgcggcag
     3541 tgcggcatcg ttcatcggat aacctcgaaa tcacccgcaa gttcccacaa tcgttcgcac
     3601 cgggcaacat caccgggagg aggatgcgca cgccctttgt taaccacgac cgcattaacc
     3661 accgcggccc ctaatgcctc gacgcttggc gtctttacaa aactttacat cgcggacaaa
     3721 ccccggaaat tcggctcctt cacacttcgc accgtggcga ccgattaagg aaggagagtc
     3781 aaatgagcac gcaagatcgg ataaatgaga tgccggcgtc cggatcccaa gtggggcggg
     3841 cgcaaccgaa ccgagcctat attgtggctg ccattgcggg tgtagctgtc atcggggtat
     3901 ttgccaattc atcccttggc cagggattgg ggcatcgtat ggtagagaac gtgcctggct
     3961 tagcggcagc cacaactttc gaggacggat tgggtccgag cttcggtcca gtcttcgcga
     4021 cggccgatgg gcaaggcggt ttcctcagcg gcgccatcga gacgatcgtg gaaactcgcg
     4081 cagatcgcat gatccgccat cttgcgatcg agatcgatgc aaccgccgaa cagcaggaca
     4141 agcttcgggc ggtcgtgcgg ggcgccgtga aggatctgtt gccggtgcga gagaaggtac
     4201 tggcggcgcg cgccaccgca cgcgaactgc tgacgcaaca ggcggtcgac cgcgcggcca
     4261 tcgaaaagtt acgcgccgat cagatcgcaa ttcatgatgc agcaagcaag cggctcgttc
     4321 aggcggtggc cgacgccgca gaagtgctta cgcccgaaca gcggcgcaag ctcaacacga
     4381 tgctgccgcc gcgcgcaggc cattggggcc gcggaccatg gaactggggc ggcttcggac
     4441 ggaactgatg gcggagccga tgtggcgaca aagatgatgc cgtgaccgat cgcatcctgc
     4501 tcatcgagga cgacgaacgt ctcgccgaga tggtgaagaa ctatctcggc gagttcggat
     4561 tttccgtaac cgtcgcccac agcggcagcg ccggcatcgc gctctaccgt cgggactgct
     4621 tcgacgtcct gattcttgac ctgatgctgc cggacatgga cgggctcgaa gtctgtcgcc
     4681 agatccgagc cgacgccgag gcgcggatcc tgatgctgac ggcgcgcggc gacgccatgg
     4741 atcgcgtcgt cggcttggag atgggcgccg acgattatct cgctaagcca ttcgaaccgc
     4801 gcgagctgtt ggcacgattg cgctctattc tgcgacgcgc aaaaggcgat tccaagctca
     4861 aggtacttcg gttcggacgg ctggatattg acgcgggagc ccgcgaagcg cggctcgacg
     4921 gcgagccccg cacactgacg agttaccagt tcgccctgct gttgggactt gcccgccatg
     4981 ccggacgagt gatgtcgcgc gaggcgctca tggatatcgt caagaacgaa cgacttgaag
     5041 ccttcgatcg gtcgattgat gtccacattt cacgcatccg cgccgcaatc gaggacgacc
     5101 caaagcgtcc acgccgcatc atcaccgtga ggggtgccgg ttatgtgttt gcgaagtcac
     5161 aagaataggc aatgcggcgg ctttatcaga aaatctatct ggtgttcctg gcaagcctcg
     5221 tggccgtggt cacgatcgcc ggattattct ggcgcctggg gcaagtcggt tcgccgtacg
     5281 ggccagcact ggagttggtc gcggaactcg cttctgccgc gcttccgccc gtggatgcgt
     5341 tgccgcaggt gcagcgccag gcggtcgagc gtttgggacg acgcttgcgc gccgatattg
     5401 cgctgttcga tcgcgaccgc tcgccgatcg cctccatcgg acggccgttg ccgcagccaa
     5461 ccaaccaaaa tggtggctgg ttgcgcgttc gcggtggggc ggcgtggagc ttccaactcc
     5521 cggacggacg ctggatcgtg gcacgaacgc tgttgcggcc gccggttcag ggcctcgtgt
     5581 ttttcctggg cgccatggca atcgcaattg cgatattcgc ctatccggtg gtccgcggac
     5641 tgaccgggcg catcgaacgc ctgcagaggg gcgtcgaaac gcttggagcc gggaatctcg
     5701 cgacccgggt tgccgttgaa ggacgcgacg aggtcgctca gctcgccgcg agcttcaatc
     5761 gcgccgccgc ccggatcgaa gaattggtcg gcgcacaccg gttgctgctc gccaacgcat
     5821 cgcacgaatt gcgcacgccc ctgtcgcgca tcaggctcgg ccttgagctt ttcgaggcga
     5881 agccagaggc caagaccaag gccgctattg cccgcgatat tgcggaactc gacgatctga
     5941 tcgaggaaat cctgctggca agccggctcg acgtcgcggc cgtacctccg accgtggagg
     6001 aagtcgatct cctggccctg gtggcggagg aatgcgctca ttacgagggc tgcgccctca
     6061 atggagaatc cgtcttgctc cgcggcgacg cacggctgtt gcgtcgactg gtgcgcaatc
     6121 ttcttgataa cgcacagcgt tacggcaagc ctccgattcg ggtcgaattg cggcgcaaac
     6181 gctcgcaggc gtcattgtcc gtcatcgatg ctggcgacgg gattgcgccg tccgagcgtg
     6241 agcacgtctt cctgccgttc tatcgactcg gcggcgaccg caagggcgcc ggcctcggcc
     6301 tcgcactggt gcgccagatc gcccggctgc acggcggcga cgcggtggcg acagcgcgcc
     6361 cggacgcccg aagctgtatc gttatccagc taccgattcc atgaagccga aaccaaagta
     6421 gggcggttcg ctttgccgcc attctcggct ggaatggacg gggtgacccg ccttacgccg
     6481 gtcgacatga ctccgccaaa attcgctctt gccatggcgg gacgaaaatg atcgtactca
     6541 ctccaggagg ggtgcgccga gcgggccgca cggatatgca gccatgccga gcttgatcaa
     6601 gttgttggca gtcgttggcg tgatagccgg gctcggatac gcggcgatgt tcgcgctcgc
     6661 caccctggtg gaccccaaga cgcgcgaaat ggtggtgacc gtgccgccgg accgcttcgt
     6721 caagcagcag cactgacgcg tatggagccc ctcaaagccc cagagcggcg attgacctcg
     6781 ctgttcctcg atatggtggc ggcggagcgc ggtggcgccg ctaatacgct tgaggcttat
     6841 ggacgtgatc tc
//
LOCUS       DATILV010000256        11057 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2361279, whole genome shotgun sequence.
ACCESSION   DATILV010000256 DATILV010000000
VERSION     DATILV010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 11057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11057
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2361279"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(6..1079)
                     /locus_tag="VLJ17_05950"
     CDS             complement(6..1079)
                     /locus_tag="VLJ17_05950"
                     /inference="COORDINATES: protein motif:HMM:NF013595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-alpha-hydroxyglycine alpha-amidating
                     lyase family protein"
                     /protein_id="HSV22557.1"
                     /translation="MSELNGGTITVRLARLGLLALFAVSAGAVYSQTVAPTNSLPNPY
                     AGAPFGKLPEGRNWGSTAGIGVDIDGKSIWVAERCGAFAPPSQVRPGVQMGCDGSNLD
                     PVLKFDETGKLVKSFGAGLILFPHGLSVDPEGNVWVTDGLGKEGKGHQVFKFSPEGKV
                     LMTLGKPGVPGSGPDEFNAPSATLVAPNGDIFVADGHGGNTNARIVKFDKTGKFIKTW
                     GMKGSAPGEIDGPHTLAMDSRGRLFLGDRGNNRIQIFDQDGNFIDQWAQFSRPSGVYI
                     DKNDVIYVADSESGSVNKTRTDWKRGIRVGSAKDGKVMALIPDPDENATTTSAAEGVT
                     ADAQGNIYGAEVGPKRVMKYVKK"
     gene            complement(1119..1865)
                     /locus_tag="VLJ17_05955"
     CDS             complement(1119..1865)
                     /locus_tag="VLJ17_05955"
                     /inference="COORDINATES: protein motif:HMM:NF018420.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1194 domain-containing protein"
                     /protein_id="HSV22558.1"
                     /translation="MQKHTNFHFGCPTRRVVAAGALAIVLAGANATAAAEVQVDLQLV
                     LAVDASGSVNMRRFELQKQGYASAFRNPRVLNAIRSGISQAIAVTMHQWTGPRLQVHV
                     VPWMVVKDEASAEALASAIENTPRKLFGGGTSISGAIDYSRLILAQSPFTATRRTIDV
                     SGDGANNIGRPARVARDEAVRDGITINGLPILSVEPDLDTYYFENVIGGPGAVMVPAD
                     SYESFAEAILKKLIIEIASDDPAMLNAPLP"
     gene            complement(2045..2929)
                     /gene="argB"
                     /locus_tag="VLJ17_05960"
     CDS             complement(2045..2929)
                     /gene="argB"
                     /locus_tag="VLJ17_05960"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HSV22559.1"
                     /translation="MTISPFDIARVLSEALPHMQQYDDEIVVVKYGGHAMGEEAAARS
                     FARDIVLLEQTAINPVVVHGGGPQIGDMLKRLGIKSEFAAGLRITSADAIEIVEMVLA
                     GGINKQIVGFINEAGGRAVGLCGKDGNIVKARKVSRTVVDPGSQIEKIVDLGFVGEPE
                     AVDTTVLDQILGRELIPVLAPVATSAAGGTYNINADTFAGAIAGALKAKRLLLLTDVP
                     GVLDNTKSLIKQLSMDDARRLIADGTISGGMIPKVETCLYALDAGVEAVVILDGKVEH
                     AVLLELLTDHGAGTLIHR"
     gene            complement(3001..3378)
                     /locus_tag="VLJ17_05965"
     CDS             complement(3001..3378)
                     /locus_tag="VLJ17_05965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015689063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HSV22560.1"
                     /translation="MMSILLVLACLMGACGVVLAAAAAHGASGVGLDSAAYLLLFHSL
                     AVLGAVALADQKLLWRPVAFVAMACFEAGGALFAGDVSMRAFTDHRLFPMAAPAGGTL
                     LILAWLLLAAAAIAACTLRRVPH"
     gene            complement(3400..4050)
                     /gene="yihA"
                     /locus_tag="VLJ17_05970"
     CDS             complement(3400..4050)
                     /gene="yihA"
                     /locus_tag="VLJ17_05970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTP-binding protein
                     YihA/YsxC"
                     /protein_id="HSV22561.1"
                     /translation="MPALTFTASEIGAGRKLFAPEWRFISAASSTASLPVMRGDEIAF
                     VGRSNVGKSSLINALANRNGLARTSHTPGRTQELVFFAADDRLTLVDMPGYGYAAAPK
                     VKVAAWTALIHAYLRGRANLKRVYVLIDARRGLTATDNEVLEALDAAAVSFQIVLTKA
                     DEVKPAELAACLDATTAALHQHPAAFPEALVTSAHGGTGIPEFRAAIARLLVEQRM"
     gene            complement(4061..5983)
                     /gene="yidC"
                     /locus_tag="VLJ17_05975"
     CDS             complement(4061..5983)
                     /gene="yidC"
                     /locus_tag="VLJ17_05975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011471296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0032977 - membrane insertase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HSV22562.1"
                     /translation="MNDQKNTILAVVLSAIVLIGWEYFYALPQKQRQEELQRQAQITQ
                     VRPRPEMTPGQTPGTPAATPQVPTQSGASAPVEQRSREAIIVSTARIAIDTPRIKGSI
                     ALKGGRIDDVSLAQYHETVDPSSPEIVLLSPSGSPHPFYAEFGWYVPAGATAKVPGPD
                     TIWRQLGTGSLGPGQPVTLSYDNGEGLEFRRTISVDDKYLFTLRDEALNRGSTPVSLY
                     PYALISRHGTPQTSGYYILHEGLVGVMGDQGEQQFTYKTMEDKKLQQFNVTNAWMGVT
                     DKYWAAALLPDIDARVQAEFRSDMNGTTRTYQTGYLLDQQVIAPGATGSANARLFAGA
                     KEVAVVGVNFPLAEVGGYNKQLNLNKFDLLIDWGWFYFITKPLFLLMDLIFRWTGNFG
                     VAILIVTVLLKILFFPLANKSYASMAKMKAVQPQMQALRERYPDDKVKQQQELMELYK
                     REKINPVAGCLPIVIQIPVFFALYKVLFVTIEMRHAPFFGWIKDLSGPDPTNVFNLFG
                     LLPFDPSHLPVIGSFLVLGAWPLIMGVTMWVQMKLNPAPPDPAQKIMFDWMPVIFTFM
                     LASFSSGLVIYWAWNNTLSVIQQSIIMRRHGAKIELFDNVKDTARSLKNLFTDIWRSV
                     RALFKKKSKPGVSGQA"
     gene            complement(5980..6387)
                     /gene="rnpA"
                     /locus_tag="VLJ17_05980"
     CDS             complement(5980..6387)
                     /gene="rnpA"
                     /locus_tag="VLJ17_05980"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HSV22563.1"
                     /translation="MERLKRRKDFLTVTTGASAPTPGFVVQMRQRGDDGPARVGFTVS
                     KKVGGAVERNRVRRQLREIVRLSAATALHTGGDYVVVARRAALGIPFVRLTEDFTGAL
                     KRLEKRWQGVPRTTSEANSSTSREISSGDQSRS"
     gene            complement(6421..6555)
                     /gene="rpmH"
                     /locus_tag="VLJ17_05985"
     CDS             complement(6421..6555)
                     /gene="rpmH"
                     /locus_tag="VLJ17_05985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010659431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HSV22564.1"
                     /translation="MKRTYQPSKLVRKRRHGFRTRMATAGGRKVLNARRARGRSRLSA
                     "
     gene            6929..7747
                     /locus_tag="VLJ17_05990"
     CDS             6929..7747
                     /locus_tag="VLJ17_05990"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HSV22565.1"
                     /translation="MSIEINQTQPTHSTDRPLALRRLLPLGVILALMAFAVAMGWHRQ
                     LSLETLVRHRSAVEDFVSAHRAVAILAFIAIYAAAVGLSFPGAALLTAGGGMIFGTLA
                     GGLAAVIAATLGATAIFLITKFAFGWVSGCRWATRAGPLGEKLAAGFRKDAFSYLVFL
                     RLVPLFPFWLINLISGPAGVGLAPFVAATALGIIPGTFAYAFFGAGLNSAIAAQEVVY
                     QACVAAGQADCHLDFDLRAAATPELIGGLVILGLIALIPPAVRRFSAIRAAQTK"
     gene            7835..9259
                     /locus_tag="VLJ17_05995"
     CDS             7835..9259
                     /locus_tag="VLJ17_05995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008593866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSV22566.1"
                     /translation="MAELLKPDICVIGAGSGGLSVAAAAAAFGVSVVLIEKGRMGGDC
                     LNYGCVPSKALIAAAKRANNSAMAGIFGVDAQPNIEFARTYRHVRNVIAATAPNDSAQ
                     RFAGLGVRVITGAARFTDPITVKVDGGAMIQARSFVVATGSSPAIPPIEGLALTPHLT
                     NETIFDLSELPSHLLVLGGGSVGLELGQAFYRLGAPVTVVEAARPLSRDDAECVEIVL
                     DALAREGVEVQAGTSVKSVRQAQGGVELVVTRGVAEETITGSHLLVAAGRVPNLDGLG
                     LEEAGIAFTKAGIVVDRSLQTSNRRVYAIGDAVAGAMMFTHVANYHAGLVIRHALFRL
                     PVKVRYNAVPWVTFTDPELAHVGLTDEQARKQGYRIRVMRSPYYENDRAQAERMTEGH
                     VKVVTSVRGRILGATIVGAYAGELIAPWTLAINQGLNIRAVAEMVAAYPTFGEANKRA
                     AMMFFASAAANPTVRRIVRWLRRG"
     gene            9371..10738
                     /locus_tag="VLJ17_06000"
     CDS             9371..10738
                     /locus_tag="VLJ17_06000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011471299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSV22567.1"
                     /translation="MLAEVCIYVPSIAHFRLTWLNNKLSAAHTAAMVFEAAPDVPDKL
                     SRQILDSIGARAVAMKMGQQRRLLATAELPSEVLQEVDIRDMRPLTAIMEAFRTLLAN
                     DTDLVRAVGPAPMGGQFVEIVIPEGPLRSAMWIYSRNVMLLSLVISAITAALAYFALH
                     YLFVRPLYRITANLGSFRADPEDRARILVPTSRHDEIGFVEHELAEMQRDLANTLQEK
                     TRLANLGLAVSKINHDLRNLLASAQLFSDRLARLPDPQVQRFSPKLMRALERAIAFCQ
                     STLSYGRAQEPPPDRRIVALMELVEEVRETLGLQPDSRIGWITSIEHSLVVDADRDQL
                     LRVLLNLARNAVQALETSAPNDPARDQIRITGRREGAVVIIEVADTGPGFSDQARAHL
                     FQAFQGSTRSGGTGLGLVIADELVRAHGGEIILVDGTIGATFRLKIPDRPIPLDERRG
                     ARARA"
     gene            10829..10905
                     /locus_tag="VLJ17_06005"
     tRNA            10829..10905
                     /locus_tag="VLJ17_06005"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10863..10865,aa:Arg,seq:acg)
BASE COUNT         2062 a         3317 c         3428 g         2250 t
ORIGIN      
        1 gaacatcact ttttgacgta cttcattacc cgcttgggcc caacctcggc gccgtagatg
       61 ttgccctggg cgtcagccgt gacgccttcg gcggcgctgg tggtggtcgc attctcgtcg
      121 ggatctggaa tgagagccat aacctttccg tccttcgcgc tgccgaccct gatgccgcgc
      181 ttccaatcgg tgcgggtctt gttgaccgag cccgattccg aatctgcaac atagatcacg
      241 tcattcttgt cgatgtagac tccgctcggc cggctgaatt gcgcccactg atcgatgaaa
      301 ttaccgtcct gatcgaagat ctggatccgg ttgttgccgc ggtcgccaag gaacagccgg
      361 ccgcgagaat ccatcgccag cgtgtgcggg ccgtcaatct caccgggcgc actgcccttc
      421 atgccccagg tcttgatgaa cttgccggtt ttgtcgaact ttacgatacg ggcattggta
      481 ttgccgccgt ggccgtcagc gacaaaaatg tcaccgttgg gcgcgaccag cgttgcggag
      541 ggagcattga actcatccgg accgctgccc gggacgccgg gcttaccgag cgtcatcaac
      601 accttgcctt ccgggctgaa cttgaagact tgatggccct tgccttcctt gccgagcccg
      661 tccgtcaccc agacgtttcc ttcggggtcg actgagaggc catgcggaaa cagtatgagc
      721 ccggcgccga aactttttac gagcttgccg gtctcgtcga acttgagaac tggatcgagg
      781 ttcgacccat cgcagcccat ttgcacaccc ggcctcacct gcgacggcgg tgcgaaggcg
      841 ccgcagcgct ccgcgaccca gatgctcttg ccatcgatat cgacgccgat acccgcggtt
      901 gagccccagt tgcggccctc cggcaatttt ccgaacggag ctccggcgta tgggttgggc
      961 agcgaattgg tgggcgcgac cgtctgggaa taaaccgcgc cggccgaaac cgcgaatagc
     1021 gccaggaggc cgaggcgcgc aaggcgaacg gtgattgtgc ctccattgag ctcagacatg
     1081 atggcgtctc ccttggtttt tcgttgattt tcggaatatc acggcagagg tgcgttgagc
     1141 atcgccggat cgtcagaagc gatctcgatg atcagcttct tcagaatggc ttcggcaaag
     1201 ctttcataac tatccgccgg aaccatgacg gcgcccggcc cgccgatgac attctcgaaa
     1261 tagtaggtgt cgagatcagg ctcgaccgaa agaatgggga gcccgttgat ggtgatgccg
     1321 tcgcgcaccg cctcgtcgcg tgcgacgcgc gccggccggc cgatattatt ggcaccgtcg
     1381 ccggatacgt cgatcgtacg gcgcgtggcg gtgaaagggc tctgcgccag gatcagccgg
     1441 gaatagtcga tagcaccgct gatcgaggtg ccgccgccga atagcttgcg aggcgtgttc
     1501 tcgatggcag aagccagggc ctctgccgag gcctcgtcct tgaccaccat ccagggcacc
     1561 acgtggacct gcaggcgcgg gccggtccat tgatgcatgg tgacggcaat cgcctgcgat
     1621 ataccggagc gaatggcatt gagtacgcgg ggattgcgga acgccgacgc atagccttgc
     1681 ttctgcagct cgaagcggcg catgttcacg ctgccggaag cgtcgaccgc gaggacgagt
     1741 tgaaggtcga cctgaacttc cgcagcggcg gtcgcatttg caccggccaa tacaatggca
     1801 agcgcgccgg cggcgacgac gcgtcgagtc gggcagccga aatggaagtt cgtgtgcttc
     1861 tgcatggaca tccggcctca cgagaatgcc cgacagtagc cgaaattccc ggtccctgga
     1921 atggcacttg tttgagcgga tttttgttcg accggactca caagagtggg caaagcgaag
     1981 cgtgcccacc ctggccgcgg cgagatgggc acggcgcgcg ccgagcgcgc cattgtctgt
     2041 gatcttagcg atgaatcagc gttccggcgc cgtgatcggt cagcaattcc agcaagaccg
     2101 catgctccac cttgccgtcc agaatgacga cggcctcgac accggcgtcg agggcataaa
     2161 ggcaggtctc caccttcggg atcatgccgc ccgaaatggt gccgtcggca atcagccgcc
     2221 gcgcgtcgtc catggagagc tgtttgatga gagacttagt gttatcgagc acgccgggta
     2281 catcggtcaa caacagcaat cgtttggcct tcagggcgcc cgcgatggcg cccgcaaatg
     2341 tgtcggcgtt tatgttgtag gtaccgccgg ccgccgaggt tgcgaccggc gccaacaccg
     2401 ggatcaattc gcggccgaga atctggtcga gcactgtggt atcgaccgcc tccggctcgc
     2461 cgacaaagcc cagatcgacg atcttttcta tctgcgagcc gggatctacc acggtgcggc
     2521 tcaccttgcg cgccttcaca atattgccgt ctttgccgca aagacccacc gccctgccgc
     2581 ccgcctcgtt gatgaagccg acgatttgct tgttgatccc tccggccagc accatttcga
     2641 cgatttcgat ggcgtcggca ctggtgatcc gaagtccggc ggcgaattcc gacttgatgc
     2701 cgagccgctt gagcatgtcg ccgatctgcg gaccgccgcc gtgcaccacc accggattga
     2761 tggcggtctg ctccaaaagt acgatatcgc gggcaaagct gcgggcagcg gcctcctcgc
     2821 ccatggcatg gccaccatat ttcactacga cgatctcgtc gtcgtattgc tgcatatgcg
     2881 gcaatgcttc ggagaggacg cgggcgatat cgaacggcga tatggtcatg gtgaaaggtt
     2941 ccggctgtaa cccgcgctat gtagctgtcg cgtcgcgcct gcgatagggg ctttcgcgcg
     3001 tcagtgcgga acgcgcctta gcgtgcacgc cgcaatggct gcggccgcga ggaggagcca
     3061 ggcgaggatc aggagtgtgc cgccagcagg ggctgccatc ggaaagagcc ggtgatcagt
     3121 gaaagcgcgc attgaaacat cgccggcaaa caacgcgccg cccgcctcaa agcacgccat
     3181 agcaacgaac gcgaccggtc gccacaacag tttttggtcg gccaaggcga cggcgccgag
     3241 cactgcgagc gaatggaaca gcaagagata agcggcgctg tcgagcccca cccccgacgc
     3301 cccgtgtgcg gctgccgcgg cgagcactac gccgcaagcg cccatcaggc aggcaaggac
     3361 gaggagtatc gacatcattt ttagaacctc tttgcaacgc tacatgcgtt gctcgaccaa
     3421 cagccgcgct atggcggcac ggaactccgg gatgccggta ccgccatgtg ccgaggtgac
     3481 gagcgcttcc ggaaacgcgg cagggtgctg atggagggcc gccgtggtgg cgtcaagaca
     3541 agcggcgagt tccgccggtt tgacctcgtc ggccttggta agaacgatct gaaagctgac
     3601 tgcggcggca tcaagggctt ccaatacctc gttatcggtc gctgtaaggc cgcgtcgggc
     3661 gtcgatgagc acgtagaccc gcttgaggtt ggcgcgaccc cgcagatagg catggattag
     3721 cgccgtccag gcggccacct tgaccttcgg ggctgccgca tagccgtagc ccggcatgtc
     3781 gacgagggtg aggcgatcat cggccgcgaa gaacacgagt tcttgggtgc ggccgggggt
     3841 gtgtgacgtc ctggcgagac cattgcggtt ggcgagcgcg ttgatgagac ttgacttacc
     3901 gacattggaa cggcccacga aggcgatctc gtcgcctcgc atgacaggca gcgaggccgt
     3961 cgaactggcg gccgagatga agcgccattc gggtgcaaac agcttacggc cggctccgat
     4021 ttcgctggcc gtaaaagtaa gcgcaggcat tcgtcctgtc tcaggcctga ccgctcacgc
     4081 ccggcttact tttttttttg aagagggctc tgacgctgcg ccagatgtcc gtgaagaggt
     4141 ttttgaggct gcgtgccgta tccttcacgt tgtcgaacag ctcgatcttg gcgccatggc
     4201 ggcgcatgat gatcgattgc tggatgactg acaacgtatt gttccaggcc cagtagatca
     4261 ccaggcccga tgagaatgat gccagcatga aggtaaatat caccggcatc caatcgaaca
     4321 tgatcttctg agctggatcg ggcggtgccg gattgagctt catctggacc cacatggtga
     4381 cgcccatgat gagtggccaa gcgccaagca ccaggaagga gccgattact ggcaggtgcg
     4441 atggatcgaa aggcagcagg ccgaacaggt tgaacacatt ggtgggatca ggccccgaaa
     4501 ggtccttgat ccagccgaag aacggcgcgt ggcgcatctc gatcgtgaca aacagcacct
     4561 tgtagagcgc gaagaacacc gggatctgga tgacgatcgg caagcagccg gcgaccggat
     4621 tgatcttctc gcgcttgtag agctccatga gctcctgctg ttgtttgacc ttatcgtccg
     4681 gatagcgctc gcgcagcgcc tgcatctgcg gctggaccgc cttcatttta gccatcgacg
     4741 cataggactt gttggcgagc gggaagaaca ggatcttgag cagtaccgtc acaatcagaa
     4801 tcgcaacgcc gaaattgccg gtccagcgga aaatcaggtc catcagcaga aacagcggct
     4861 tggtgatgaa gtagaaccag ccccaatcga taagcagatc aaacttgttg aggttgagct
     4921 gcttgttgta tccgccgact tcggccagcg ggaaattgac gccgaccaca gcgacctcct
     4981 tggcgcccgc gaacagacga gcgttcgccg agccggtggc gccgggcgca atgacctgct
     5041 gatcgagcaa atagccggtt tgatatgtcc tggtcgtgcc gttcatgtcg gaacgaaact
     5101 ccgcctgaac gcgagcatcg atgtccggca gcaatgcggc ggcccaatac ttgtcagtga
     5161 cacccatcca tgcattggtc acgttgaatt gctgtagctt cttgtcttcc atcgtcttat
     5221 aggtgaactg ctgctctccc tgatctccca tcacgccgac gagcccctcg tgcaggatgt
     5281 agtagcccga ggtctgcggc gtgccatggc gcgagatcag cgcgtaaggg tatagtgaaa
     5341 ccggggtcga gccgcggttt agcgcttcgt ctctgagcgt gaacagatat ttgtcgtcta
     5401 cggaaatggt gcgtcgaaac tccagccctt cgccattgtc atagctgagc gtgacgggtt
     5461 gccctggacc gagcgatccg gtgcccaatt ggcgccaaat cgtgtctgga cctggaactt
     5521 tcgcagtcgc tccagccgga acgtaccagc cgaactccgc atagaacgga tgtgggcttc
     5581 ccgagggcga gagcagcacg atttcgggcg aggaaggatc gacggtctcg tgatattggg
     5641 cgagcgaaac gtcgtcgatg cggccgccct ttagggcgat cgagcctttg atgcgcggcg
     5701 tgtcgattgc aatgcgcgca gtcgaaacga tgatcgcctc gcggcttctt tgctcaacgg
     5761 gggccgaggc accagattgt gtcggaacct gtggcgtcgc ggccggagtg ccgggcgttt
     5821 gaccgggcgt catctcgggc cgcgggcgaa cctgagtgat ctgagcctgt cgctgcagtt
     5881 cctcctggcg ttgcttttgc ggcagtgcgt agaaatactc ccatccgatc agtacaatgg
     5941 ccgacagcac gacggcgagt attgtgttct tctgatcgtt catgacctgc tctgatcgcc
     6001 ggatgagatt tcccgcgagg tcgacgaatt cgcctcgctc gtagtccgcg gaaccccttg
     6061 ccacctcttc tcgaggcgct ttagcgctcc agtgaaatcc tcggtcagtc taacgaaagg
     6121 aatgccgagc gctgctcggc gtgcaactac cacataatcg ccgccggtat gcagagcagt
     6181 cgcggccgaa agccgcacaa tttcccgcaa ttgacgacgc acgcggttgc gctcgaccgc
     6241 gccgcccacc tttttggaga ccgtgaaccc gacccgtgcc gggccatcgt cgccgcgttg
     6301 gcgcatctgc acgacaaaac ccggcgtcgg cgcgctagct ccggtggtta cagtcaaaaa
     6361 atccttgcgt cgcttcagtc gttccattgc accgacatgc caaaagccgg cgcgcacggt
     6421 tcatgcactg agccggctac gcccgcgcgc ccgacgggca ttgagcacct tgcggccacc
     6481 cgcagtggcc atccgggttc gaaagccatg acggcgctta cgcaccagtt tgctcggttg
     6541 atacgtccgc ttcacagcct tcccctctga ttgctccggc tgattcctgg gtttttcagg
     6601 ctgcttcccg atctcaacgc ccaggcaatt tcagtaacta tagtgccaca actatagcgc
     6661 cgcccgggtc acgtcagccg ttgacgggac gggcgtcgct cgattgctgc ggcttatacg
     6721 ggagcgggct agccccgtca atgcaccgac caccggttgc gttcgccctg ctgatgccac
     6781 cacagctgct atcacgttcg cgcgagccga caaccgaaaa aatgtcaaat cgtggtgaaa
     6841 tccggccgac gacgtgatgc tggggtatac ataagctcgc ctgccccagc tcccttgcct
     6901 cgaccgattg cggcagaaat agaacctcat gtcgatcgag atcaaccaaa cccagccgac
     6961 gcactctaca gaccggcccc tcgcgcttcg acggctcctc ccgcttggcg tgatcctcgc
     7021 cttgatggcg ttcgcggttg ccatgggatg gcatcggcaa ttatctctgg aaacgctggt
     7081 ccgtcaccgc tccgccgtcg aggatttcgt cagtgcacat cgtgccgtgg cgatcctcgc
     7141 tttcattgcc atttacgcgg cggcggtcgg gctgtcgttt ccgggagccg cacttctgac
     7201 cgccggcggc ggcatgattt tcggcacctt ggccggtggc ctcgccgccg tcatagccgc
     7261 gaccctaggc gcgaccgcca ttttcttgat caccaaattt gcatttggtt gggtgtccgg
     7321 ttgtcggtgg gcaactcgtg cagggccgct tggcgaaaag ctcgcggccg gctttcgtaa
     7381 ggacgctttc agctatctgg ttttcctgcg tctggtgccg ctgttcccgt tctggctgat
     7441 caatttgata tcggggccgg cgggggttgg gcttgcgcct ttcgttgccg cgacggcact
     7501 tggaatcatt ccggggactt tcgcatatgc gttttttgga gccggactga atagtgcgat
     7561 cgcagcgcag gaggtcgtct atcaggcttg cgtggcagcc gggcaagcgg actgccattt
     7621 ggatttcgat ttgcgggctg cggccacccc cgagttgatc ggcggtctgg taatcctcgg
     7681 attgattgcg ctcattccgc ccgccgtgag acgcttcagc gcgattcggg cggcccaaac
     7741 gaagtagcta ggtttccggc cgcccagatg ccggattgct gtgactggtc atagagtgaa
     7801 ccgcatcccg gggtggacac gcgcggaggt atgcttggct gaattgctca agcctgacat
     7861 ttgcgtaatt ggagcgggct caggcggcct ttcggttgcg gcggctgcgg ccgcattcgg
     7921 ggtctcggtt gtgctgatcg agaagggccg gatggggggc gactgcctta actacggctg
     7981 tgtaccatcg aaggcattga ttgctgccgc aaagcgcgcc aacaacagcg ccatggcggg
     8041 catttttgga gtcgatgcac agcctaatat tgaattcgcc cgtacctatc gccacgtccg
     8101 aaatgtaatc gccgctactg cgccgaacga ctcggcgcag cgcttcgccg gccttggggt
     8161 acgggtcata accggcgctg cccgcttcac ggacccgatc accgtgaagg tcgacggcgg
     8221 tgccatgata caagctcgaa gcttcgtcgt cgcgaccggc tcatcgcccg ccataccgcc
     8281 gattgagggc cttgccctga cgcctcattt gaccaatgag acgatattcg acctttccga
     8341 gctgccatcc cacctgctgg tgcttggggg aggctcggtc ggtctcgaac ttggtcaagc
     8401 attctaccgt cttggcgcgc cagtgaccgt cgtcgaggcc gcgcgaccct tgtccaggga
     8461 cgacgcggaa tgcgtcgaga tcgtccttga tgcgctcgcc cgcgagggcg tcgaggttca
     8521 ggcgggtacg agcgtgaaat cagtgcgaca ggcacagggg ggggtcgagc ttgtggttac
     8581 gcgcggtgtg gccgaggaga ccatcacggg cagccacctg ttagtcgctg ccggccgcgt
     8641 gcccaacctc gatggcctcg gtttggaaga agccggaatc gcattcacca aggcgggcat
     8701 cgtggtcgat cgcagcctgc agacgtcgaa ccggcgtgtc tacgccatcg gcgatgccgt
     8761 cgccggcgcc atgatgttta cccatgtggc caactatcat gccggactgg tgatccggca
     8821 tgcattgttt cgtttgccgg tcaaagtgag atataatgcg gttccatggg tgacgtttac
     8881 agaccccgag cttgcgcatg tcggattgac tgacgaacag gcacgcaagc agggatatcg
     8941 gattcgtgta atgcgttcgc cgtattacga aaacgatcgg gcccaggccg agcggatgac
     9001 cgaaggtcac gtcaaggttg tgaccagtgt gcgaggccgg atactcggcg cgaccatcgt
     9061 cggagcgtat gccggtgagc tgatcgctcc gtggacgctt gccatcaatc aaggtctcaa
     9121 catccgcgcc gtggcagaga tggtggcggc ctatccgacc ttcggtgagg ccaacaaacg
     9181 cgccgcgatg atgttttttg cgtctgctgc agcaaacccg accgtgcggc gtatcgttcg
     9241 atggctccgc agaggataaa gcaagttggc gctcacacgt gacgatatcg atccgcctgc
     9301 ctccgccacg ccgccgcgta tccgtttcgg gttatccgcc aagcttctgc tgctgaccgt
     9361 gccgttcgtg atgctggcgg aggtgtgcat ctatgtaccg tcgatcgcgc attttcgtct
     9421 gacttggctt aacaacaagc tgagcgccgc gcacaccgcc gcaatggttt tcgaggcggc
     9481 gcctgacgtg ccggacaagt tgtctcggca gattctcgac agcatcgggg cgcgggcggt
     9541 cgccatgaag atgggtcagc agcggcggct gttggccact gctgagttgc cgagcgaggt
     9601 cttgcaggag gtcgatattc gcgacatgag gccgcttacc gccatcatgg aagccttccg
     9661 gactcttttg gccaacgata cggatctcgt gcgcgccgtt gggccggcgc cgatgggtgg
     9721 ccaattcgtc gagatcgtga tcccggaagg cccgttgcgg agcgcgatgt ggatttattc
     9781 gcgcaacgtg atgctgcttt cgctggtgat ctcggctatc accgcggcgc ttgcatactt
     9841 tgcacttcat tatctgttcg ttcgtccgct ctaccgcatc accgccaacc tggggagctt
     9901 tcgagccgac ccggaagacc gagcgcgtat attggtgccg acgtcgcggc atgacgaaat
     9961 tggtttcgtc gagcacgaac tcgctgaaat gcagcgcgat ctcgccaata ctctgcaaga
    10021 gaagacgcgc cttgcgaacc ttggtttggc agtttccaag atcaaccacg atttgcgcaa
    10081 cctgttggca tcggctcagt tgttttctga ccggctggct aggctgccgg atccccaggt
    10141 acaacgcttc tcccccaagc taatgcgggc gctcgagcgg gcgatcgctt tctgccaatc
    10201 cacattgtcc tacgggcgcg cccaggagcc gccgcctgat cgccggatcg ttgcgctgat
    10261 ggaactcgtc gaggaggtgc gcgagacgct cggactgcag cctgattccc ggatcggctg
    10321 gatcacgtcg atcgagcata gcttggtggt cgatgcggac cgcgaccagt tgctgcgcgt
    10381 ccttcttaat ctcgctcgca atgccgtgca ggcgctggag accagcgccc ccaatgaccc
    10441 ggcgcgcgat caaatccgga taaccggacg gcgcgagggg gccgtcgtga ttatcgaggt
    10501 tgcggatacc ggtccgggat tctcagatca ggcgcgggcg catttgttcc aggcgttcca
    10561 aggctcgact cggtccggcg gcaccgggct cggcctggtg atcgcggacg aactcgtgcg
    10621 cgcccatggg ggcgagatca tcctggtgga cggaaccatc ggggcgacgt tccgcctgaa
    10681 aatccccgat cgcccaatcc cgcttgacga gcgacgcggt gcccgggccc gcgcatagcg
    10741 cttgggagtc ttgccaagtc agaacggagc ctatagctat cccggaccgc cgggaatggc
    10801 ctaagcgctt gccccggcgt tgcagccagc gcccgtagct cagctggata gagcaccaga
    10861 ctacgaatct gggggtcgga ggttcgaatc cttccgggcg cgccagaatc acaattgtcc
    10921 agcccggaga catgggtgac aacctttggg ccgaacggat tgtcgagggg ttgcagagtt
    10981 ctttgctcca ggtcgatata gccgagatca tagtccatga agctgacgag ccagatgccg
    11041 tcatcgacct ccttgat
//
LOCUS       DATILV010000257         4669 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2106330, whole genome shotgun sequence.
ACCESSION   DATILV010000257 DATILV010000000
VERSION     DATILV010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4669)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4669)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4669
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2106330"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(66..275)
                     /locus_tag="VLJ17_06010"
     CDS             complement(66..275)
                     /locus_tag="VLJ17_06010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013164894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016989 - sigma factor antagonist activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NepR family anti-sigma factor"
                     /protein_id="HSV22568.1"
                     /translation="MNNDGPARQRAKTDVRGSETVVKLCPDIKAKIGQRLRLMYSEVV
                     DQGMPDRFAEMLRRLDESVDESKKK"
     gene            565..1368
                     /locus_tag="VLJ17_06015"
     CDS             565..1368
                     /locus_tag="VLJ17_06015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009337594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV22569.1"
                     /translation="MHKSQAIAQHVPYLRRYARALTGNQASGDSYVAAALDALVKKPT
                     LLDTADHPRVALYQVFSAIWNSDELNGRTNSVVAMRPAERHLGQITSMPRQAFLLISV
                     EGFSEDDAATILNIDRQKLQELIDESGRELAAQIATDVLIIEDEALIALDLEDIVENL
                     GHRSIGIARTRSEAIALSKIKPPGLILADIQLADGSSGLEAVNDLLAAFAVPVVFITA
                     YPERFLTGERPEPAFLVSKPYQKSMISALVSQALFFERNAVRQERRATG"
     gene            complement(1685..2368)
                     /locus_tag="VLJ17_06020"
     CDS             complement(1685..2368)
                     /locus_tag="VLJ17_06020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22570.1"
                     /translation="MRTIDLARLFACAALATVPLTLSTQASAQALPPTSPPQIAPALV
                     PAHVVDLMTVDGMAAFGAQWKHMEAKIVEGPALPAAMPGYKSSYDISPHAGEKGFDDS
                     SWPTIEPKGLTDRRGGGKVSFLWYRTNLAVPEKIGNFETAGAKMVLTAYVDDYAEVWV
                     NGEMPRRAGITSPATIQGFNIPNRVVLTDSVKAGDKIQIAIFGINGPISVAPPNFVFF
                     RQASIEFYK"
     gene            complement(2552..4051)
                     /locus_tag="VLJ17_06025"
     CDS             complement(2552..4051)
                     /locus_tag="VLJ17_06025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22571.1"
                     /translation="MPDISPAISKHIPGGAMGLVVNAIFRVRAITRRPTSIAIVAALL
                     FAANLVGGFPGVANDDSNSQYAQAVDQHFNDWHPPIMAWLWSIFRLLADGSSPMFCFH
                     IACYWLGFGLIAVALGRTGRPMAAWGILGVGLFPPFLMMNINILKDVGLAVTFLSAFA
                     VLFWYRIQDLKVPFAVIAISIVLLFYGTLVRSNAVFGVAPLLAYLINPQWLNRPWRLL
                     VFSTPVAMLMVPISGLFNHNVLNATPLGVIRALEIFDMTGIAFYSGDVSVFGSGSSFT
                     KQDIDRCYTPIQWDTLSPWGECRFFWNRLAVSQDLQGVEKLDPMAVMGARPNPDLPHR
                     WIAAIIAHPLAYTRHRLAHFSSEIGFRTKPNQGDAVFGVVAGGEVRDSLGDVPATPVL
                     RELVYLYDILKTPAFWLVIGACLLALLASGKSPRLPAGLEAALALVLSGLLYTCAYLI
                     VGVATDFRYQFWSMIATFTALVISFSGLRDVVEAAITEVSFQAKAKASE"
     gene            complement(4055..>4669)
                     /locus_tag="VLJ17_06030"
     CDS             complement(4055..>4669)
                     /locus_tag="VLJ17_06030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSV22572.1"
                     /translation="LEEERRLAHVGLTRARKRAKIYFVSHRLVRGTWTATMPSRFVDE
                     LPETHVAVDESKGSFGGFTGYGNVGGSRFDQVETFGSTYSTPGWQRAKSRGGGFGGGG
                     GAASSGNAGGSRNRGGFRDAGASWSGRTTGARTRGAQVGPVTIEGELVAKSTGTVSAF
                     AIGDRVFHQKFGNGNVLYVEGNKLTIAFDRAGEKKVVDSFVERV"
BASE COUNT         1013 a         1382 c         1315 g          959 t
ORIGIN      
        1 gattgcgaat gcgcgcaggc tcggaaccgc caccaacgtt gcgtcgcgga cgtcgttcct
       61 gcggctcatt tttttttgct ctcgtccacc gattcgtcga gccgtctcag catttcagca
      121 aagcgatctg gcatcccctg atcgacaact tcgctgtaca tcaggcgcag tcgctgcccg
      181 atttttgcct tgatatcggg acaaagcttc accaccgttt cggatcctcg cacgtccgtc
      241 ttcgctcttt gccgcgctgg cccatcgttg ttcataattt tcctcacacc cgcggtttaa
      301 gatattgcca gggcgtctgc gggcccatcc agcttgaaca acgtacattg catcggtcgg
      361 ttccggccca atggaactct tcttaccgtt gaaagttaac ttttttttac ggctgagagt
      421 tgaggacgtg tcaacgcggg agaattgtgc catgcacaag tcccaggtta ttgcaaagtt
      481 aactttggtt attgcaaagt taactttttt acggctgaga gttgaggacg tgtcgacgcg
      541 ccattgaaaa ggggagaatt ggacatgcac aagtcccagg ctattgctca gcatgtgccg
      601 tatttgcggc ggtatgcccg cgctttgacc ggaaaccaag ccagcgggga ttcatacgtg
      661 gctgcggcgc tggacgcact ggtcaagaag ccaactcttc tcgataccgc agaccatccg
      721 cgagttgcat tgtatcaggt attttctgcg atttggaatt cggacgagct gaacggtaga
      781 accaacagcg tcgttgctat gaggcctgcc gaacgccacc ttggtcagat cacatcgatg
      841 ccgcgacaag cttttctgct tatttccgta gaaggctttt ccgaggacga tgcggccaca
      901 atcctcaata tcgaccggca gaagctgcag gagctgattg acgaatccgg gagagaactt
      961 gccgcccaga ttgcaaccga tgttctaatc atcgaagatg aggccctgat cgcccttgat
     1021 ctcgaagata tcgtcgaaaa ccttggtcat cgcagcatcg ggattgcgcg cacacgatca
     1081 gaggcgattg cgttgtccaa gattaaacct cccggcctca ttctggcgga cattcaattg
     1141 gcggacggaa gctctggatt ggaagccgtc aatgacctgc tcgccgcttt tgcggttccg
     1201 gtagtcttca ttacggcata tccggaacgc tttctaaccg gcgagcgtcc ggagcctgca
     1261 ttcctggttt ccaagcccta tcagaaatcg atgatttccg cactcgtcag tcaagcactg
     1321 ttcttcgaac gcaatgcagt acggcaagag aggcgagcaa ccggttgacc ggcctcgctc
     1381 ggcaggcgat taattcattg caatgccaaa aggcgatctc aacttgatcg cctctatcaa
     1441 cgcgtcatcg gcgatctcga caccgtcgtc cgagccgtcg gcctggcaac gccgccgact
     1501 gcgtggtggc caaaacctgc gtgagcctgt tcccaggcat catccagctc atggccgaca
     1561 agggatacga taccgtttct caaagaacac tcccgggcac ttttgctctc ctcgcaaaag
     1621 gcccggtgtg taaccatgtc tccgagatga actgtcaacc catctctcag gaagagcaca
     1681 tcatctactt gtaaaattcg atcgacgcct ggcggaagaa cacgaaattc ggcggcgcaa
     1741 ccgaaattgg tccgttgatg ccgaagatcg caatttggat tttgtccccg gccttgacag
     1801 aatcggtgag caccacgcgg ttcggaatgt taaagccctg gatggtggcc gggctggtga
     1861 tgccggcgcg gcgcggcatc tcgccattca cccacacctc agcgtagtcg tccacgtagg
     1921 ccgtcagcac cattttggcg ccggcggttt cgaaatttcc gatcttttct gggacggcca
     1981 agttggtgcg gtaccacagg aacgatacct tgccgccgcc acgccggtca gtgagcccct
     2041 tgggttcgat agtcggccac gatgaatcat cgaatccctt ctcgccggca tggggcgaga
     2101 tgtcatatga ggacttgtac cccggcatgg cggccggcag cgccggccct tcgacgatct
     2161 tcgcctccat gtgcttccac tgggcaccga acgccgccat gccgtcaacc gtcatcaggt
     2221 cgacgacgtg cgcgggcacc agggctggcg cgatctgcgg cggcgatgtc ggcggcaagg
     2281 cctgggccga cgcctgggtc gacaaagtca gcggtacggt cgcaagtgca gcgcaggcga
     2341 acagcctggc gagatcgata gtgcgcatgg tatcctcccg ttttgtcacc gacacgtcag
     2401 atgctcgatg gcggcgtgct tcgctgccac gaaggcggga aggttaagcc ccgaaggtga
     2461 aggcgttcaa gagggaaaag ctagggggcg tcccggtcga ggttgccggc aaacgaccac
     2521 tccgagccat ccgggccgcg ggtaccgaat attactcgct agctttggcc ttggcttgga
     2581 acgaaacttc cgtgatcgcc gcctcaacta cgtctcttag tccagaaaaa gagataacaa
     2641 gggccgtgaa tgttgcgatc atgctccaga attgatagcg aaagtccgtc gcgacgccga
     2701 cgatgagata ggcgcaggta tagagtaggc cggacaggac gagcgcaagc gcagcttcaa
     2761 gtcccgcagg aagtcgcggc gatttgcccg aagcaagcag cgccagcaaa cacgcgccga
     2821 tcaccagcca gaacgccggc gttttcaaaa tgtcgtaaag atacaccagt tctcgcagca
     2881 cgggggttgc cgggacgtcg ccaagagagt cacggacttc tccgcccgcc acaacaccaa
     2941 acaccgcgtc gccctggttg ggcttagtgc gaaagccaat ctcggagctg aaatgggcca
     3001 atctatgcct tgtgtaggca agcggatgcg cgatgatcgc cgcgatccaa cgatgcggca
     3061 gatccggatt gggccgagcc cccataacgg ccatcgggtc caacttttcg accccttgta
     3121 agtcctggga cacggccaac cgattccaaa aaaaccgaca ttcgccccat ggcgaaagtg
     3181 tatcccactg gattggcgta tagcacctgt caatgtcctg cttggtgaat gagcttccgg
     3241 acccgaatac cgacacgtcg ccagaataga atgctattcc cgtcatatcg aatatttcca
     3301 gcgctcggat tacccctagc ggggtcgcgt ttagaacatt gtggttaaac agacctgata
     3361 tcggaaccat taacattgcg actggggtag aaaataccaa gagacgccat gggcggttca
     3421 gccactgcgg gttgatcaag taggccaaca gcggcgcgac gccaaacacg gcgttgctgc
     3481 gcaccagcgt gccatagaaa agcaagacga tcgaaatcgc gatgaccgcg aacggaactt
     3541 tcaggtcctg aatccgatac caaaacaaga ctgcgaacgc tgagaggaaa gtgacggcca
     3601 gcccgacgtc cttgagaata ttgatattca tcatcaggaa cggcgggaag agtccgacgc
     3661 cgaggatccc ccaggcagcc atcggccggc cggttcgtcc gagtgcgact gcgatcagcc
     3721 caaagcccag ccagtagcaa gcaatatgaa agcagaacat tgggctgctt ccgtctgcaa
     3781 gcagtcgaaa aatggaccat agccaagcca ttatgggggg gtgccagtca ttgaaatgct
     3841 gatcgaccgc ctgggcatac tgcgaattgc tgtcgtcatt ggcgacgcca ggaaacccgc
     3901 caaccagatt ggcggcgaac agcagcgcgg ccactatggc gatcgaagtc ggtcttctcg
     3961 tgattgcacg cactcggaat attgcgttga caaccaagcc catggcgccg cccggtatgt
     4021 gcttggaaat tgccggtgaa atatccggca atatttacac ccgctccaca aagctatcta
     4081 ccaccttctt ctccccggcc cggtcgaacg cgatggtgag cttattgccc tcgacataga
     4141 ggacgttgcc attgccgaat ttctggtgga acacgcggtc gccgatcgcg aaggccgaga
     4201 cagtgccggt cgatttcgcc accagttcgc cttcgatcgt cacaggtcct acttgagcgc
     4261 cgcgcgtgcg cgctccggtc gttctgcccg accacgacgc gccggcgtcg cggaagccgc
     4321 cgcggtttct ggagccgccc gcgtttccgc tcgatgcggc tccgccgcct ccaccgaacc
     4381 cgcccccgcg gctcttggcg cgttgccagc cgggggtgct gtaagtcgag ccgaacgttt
     4441 ccacctggtc gaaccgcgag ccgcccacgt tgccgtagcc cgtgaagccc ccgaagctgc
     4501 ccttcgattc atcgactgcc acgtgggtct cgggcaattc gtcgacgaaa cgcgacggca
     4561 tggtggcggt ccaggtgccg cgcacaaggc ggtgcgacac gaaatatatt ttggcgcgct
     4621 tgcgcgccct tgtcaggccc acatgggcga ggcgtcgctc ctcttcgag
//
LOCUS       DATILV010000258         2864 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_829694, whole genome shotgun sequence.
ACCESSION   DATILV010000258 DATILV010000000
VERSION     DATILV010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2864)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2864)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2864
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_829694"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..621
                     /locus_tag="VLJ17_06035"
     CDS             <1..621
                     /locus_tag="VLJ17_06035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012591140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSV22573.1"
                     /translation="GMLFHDAEVLERLRTLADRYHILLIFDEIFTGFGRTGGMFACET
                     VVPDIVTLSKALTGGTMPLAATIARRAVFDAFWSDAPAHALMHGPTYMANALACAAAN
                     ASLDLFEREPRLAQVAAIAAALQQGLAPCRGRPRVRDVRVRGAIGVVALDRIDDVYEL
                     RRRFVAEGVFVRPFGSTVYLTPAFTIAPDELSTLTAAIVSVIGEMK"
     gene            complement(662..919)
                     /locus_tag="VLJ17_06040"
     CDS             complement(662..919)
                     /locus_tag="VLJ17_06040"
                     /inference="COORDINATES: protein motif:HMM:NF023494.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3551 domain-containing protein"
                     /protein_id="HSV22574.1"
                     /translation="MAKLIFAVLTLVAAVLMQSRSGGAAPYWPWCSQYDHPSYAHSCA
                     FSSYEQCFQTVWGIGGYCYQNPYPPPAPARPAKQNRQTERR"
     gene            complement(1068..1325)
                     /locus_tag="VLJ17_06045"
     CDS             complement(1068..1325)
                     /locus_tag="VLJ17_06045"
                     /inference="COORDINATES: protein motif:HMM:NF023494.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3551 domain-containing protein"
                     /protein_id="HSV22575.1"
                     /translation="MAKLIFALLTLVAAVLMHPRSGEAAPYWPWCSQYDNPTDAHSCA
                     FSSYEQCFQTIWGIGGYCYRNPYPPPAPPRPAKPNRQTERR"
     gene            1671..>2864
                     /locus_tag="VLJ17_06050"
     CDS             1671..>2864
                     /locus_tag="VLJ17_06050"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV22576.1"
                     /translation="MESAMQGPGNGNIEKAIALFRSGNAVAAAQTCNAILRKNSRDVA
                     ALYLLALTAMQQQDCAKAERIFAKVTKLEANSAEIWANRGNNLIAMNMLDRAFEAFDR
                     ALAIEPLFLEVLYNRGKLLHDAGRLEEALASYRKCLEIMPQFADALNNSGAILAQLDR
                     HDEALAAFDKCLAITPNAADTLNNRGNLLARLERNDEALTSYDKCIAVAPDFAEAWNN
                     VGRLLFKAKRHQEAVKVLGRALELDPRAEYAVGNLLGARQQLCIWDDLPRLKSKLVDG
                     VQKGEPVATPFALLAATESPQLQLDCARAFVAKAHPPADRQLWRGERYAHERIRIAYL
                     SADFRDHPVARLIAGLFEHHDQTKFETTAISFSPGNADEMQYRISSAFERFIDARHKS
                     DHEVAN"
BASE COUNT          570 a          865 c          873 g          556 t
ORIGIN      
        1 ggcatgcttt tccatgacgc agaggtgctg gagcgattgc ggaccctcgc cgaccgctat
       61 catattctcc tgattttcga tgaaatcttc accggcttcg gccgcaccgg tgggatgttc
      121 gcgtgcgaaa ctgttgtgcc cgacattgta acgctgtcga aggcactgac cggcggcacc
      181 atgccgctcg ccgccaccat tgcgcgccgc gccgtgttcg atgcgttctg gtcagacgcg
      241 ccggcccacg ccctcatgca cggcccaacc tacatggcga atgcgctcgc ctgtgccgcc
      301 gccaatgcct cgctcgatct gttcgagcgc gaaccgcgat tagcccaggt cgccgccatt
      361 gcggccgcgc tgcagcaagg gctcgcgccc tgccgcggca ggccgcgtgt tcgcgacgtg
      421 cgggtaaggg gcgcgatcgg ggttgtcgcg ctcgaccgca tcgatgacgt ttacgaactg
      481 cgccggcgct tcgtggcgga gggcgtgttc gtgcgaccgt tcggctctac ggtctatctc
      541 acgccggcct tcaccatcgc gccggacgaa ctttcgaccc tcaccgccgc cattgtttcg
      601 gtcatcggtg agatgaaata gcgcaaccgc gcccacaaac ggggcgaggg aatcaactcc
      661 gtcagcgacg ctcggtttgg cggttctgct ttgcaggccg ggcgggcgcg ggcggcggat
      721 atgggttttg gtagcaatag ccgccgatgc cccagacggt ctggaagcac tgctcatagc
      781 tgctaaacgc acatgagtga gcatagctcg ggtgatcgta ttgggagcac cacggccagt
      841 agggcgcggc tcctcccgag cgcgactgca tcaataccgc ggccaccaag gtcaacaccg
      901 cgaaaattag ctttgccatt acgatttcct cctctggatg gtcgaccgaa atgcgcgctg
      961 tcgtttgtat catgcgggct gattgacgtt cgatcgaacc cggtagcccg gccaagcgcg
     1021 cgcaacattc tgctccctcc ccgcaagcgg ggaaggaatc aaccccatca gcgacgctcg
     1081 gtttggcgat tcggctttgc aggccgcggg ggcgcgggcg gcgggtatgg atttcggtaa
     1141 caatagccgc cgatgcccca gatagtctgg aagcactgct cataactgct gaacgcgcac
     1201 gagtgagcat cggtcgggtt gtcgtattgg gagcaccatg gccagtaggg cgcggcttct
     1261 ccggagcgcg ggtgcatcag taccgcggct accaaagtca acaacgcgaa gatcaatttt
     1321 gccatcgcga ttcctcctca ggatgatcga ccgaaatgcg cgccgtagtt tgtatcgtgc
     1381 gggctggttg aggttcgatc gaacctgagg tgcccggcca agcgcacgca aagctcagtc
     1441 gtattaaata tagacctgat gtcgcgggac atgaagggcg taacttgaag cggcgctgcc
     1501 gctcggatcc tcaccgcggg cacaatgcat gcgggcgtgc aatctggctt gagccgtgcc
     1561 ggatttgatc gtaggaaacc gatgcacgac catcaggtgc ggcattttga cgtgcaacgg
     1621 cacgccggtt gacgtatcca atgcgtggcg cggccgaccc tctcgccgca atggaatccg
     1681 ccatgcaggg ccccggcaac ggcaatatcg aaaaggctat cgccctgttt cgcagcggaa
     1741 atgctgtcgc cgcggcgcag acctgcaacg ctatcctgcg caaaaatagc cgggatgtgg
     1801 ctgcgcttta cctgctggcg ttaaccgcca tgcagcaaca ggattgcgcc aaggccgagc
     1861 ggatttttgc aaaggtaacg aagttggagg cgaattccgc ggaaatctgg gccaatcgcg
     1921 gcaacaatct gatcgcgatg aacatgctcg atcgtgcgtt cgaggcattt gatcgggcgc
     1981 ttgcgatcga accgctgttc cttgaagtat tgtacaatcg cggaaaattg ctgcacgacg
     2041 cgggacgact ggaggaggcg ctggcgtcct accggaagtg cctcgaaatc atgccgcaat
     2101 tcgcggacgc gctcaacaac agcggcgcca ttctggccca gttggatcgg catgacgagg
     2161 cgctcgcggc attcgacaag tgccttgcga tcacgccgaa tgccgcggac acgctcaaca
     2221 atcgcggcaa tctcctcgcc aggcttgaac gcaatgacga ggctctgacg agctacgaca
     2281 aatgcatcgc ggttgccccg gactttgcgg aggcgtggaa caatgtcggc aggctcctct
     2341 tcaaagcaaa gcggcaccaa gaagccgtga aagtattggg tcgggcgctg gagctcgatc
     2401 ctcgcgccga atacgccgtc ggaaatctgc ttggtgcccg gcagcagctc tgcatctggg
     2461 acgatctgcc ccgactaaag tccaagctcg tagacggcgt gcaaaaaggc gaaccggtgg
     2521 caacgccttt tgctttgctc gccgcgacgg agtcacccca gcttcagctt gactgcgcac
     2581 gggcttttgt cgccaaggcg catccgccgg ctgatcgcca gttgtggcgg ggtgaacgct
     2641 atgcgcatga acgcatcaga attgcctatc tatccgccga ttttcgcgat cacccggtcg
     2701 cccgcctcat cgccggattg ttcgagcacc atgaccaaac gaaattcgag accaccgcaa
     2761 tctcgttctc cccgggtaat gcggacgaga tgcaatatcg aatcagtagc gcattcgaga
     2821 ggttcatcga tgctcgccat aagagcgatc acgaagtggc aaat
//
LOCUS       DATILV010000259         5043 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3129307, whole genome shotgun sequence.
ACCESSION   DATILV010000259 DATILV010000000
VERSION     DATILV010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5043
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3129307"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..835
                     /locus_tag="VLJ17_06055"
     CDS             <1..835
                     /locus_tag="VLJ17_06055"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV22577.1"
                     /translation="QQQNWTWCVNAQHIFVPYLVIAGCTAVIQLGRETPQNQAIAFAY
                     RGNAYREKGDLDRALSDFNEAIRINPRFSLAFTNRGNVYRTKGDLHSALADYNEAIRL
                     DPTVAKAFANRGSLYHAIGGFDRAIVDLGEAIRLDANDPFARFNRGTAYTAKGEFDSA
                     LTDYNEAIRLYPTFSMAFNNRGVLFRNIADLDRAIADFTDAVRFDPWSAIAYNNRAMV
                     WAQKGELGRAIADFTTAITLDPIYAGAFVGRGQAKQKMGDGSGAEADFEAAKAINQSG
                     H"
     gene            complement(1110..3188)
                     /locus_tag="VLJ17_06060"
     CDS             complement(1110..3188)
                     /locus_tag="VLJ17_06060"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV22578.1"
                     /translation="MTSPHAQIQQDIDRCGGKDGAPSELQIRSCTALIESNAYAGKEL
                     AFAFNNRGLAHYHKRDFDSALASLNQAIALDPKFAPGYNNRALTYVALGDLDRAIADF
                     SEAIRLDPTDPSSLRNRGAAYSSKHDYGRAVADYTAAIKLDPANGAAYSGRANAYFEE
                     KDYDHAIADYTQALKVAPTEQGLLKSRAFAYYYEQQFDHAIADLTEAIRLNPADASTF
                     YNRAIAYSAKQNHDLAIADYTNAIRLDPGRVRAHAGRATSFSAKRDYNDAIADYTQVI
                     RLEPNNRDAFYHRAAAFSAKGDFDRAIADYAEAIKLDPSEPRAHAERGALYSGKREYD
                     DAIADFTAIIRIDPRNRNAFYSRGIAYRAKQEYDVAIADLTEAIRLDSGAASAYAARG
                     NAYSAKRDYERAIADYSEAVRLDPKDRTSLYNRGVAYRVKQDYDRSIADFTAAIALDA
                     RDAAAFTGRGNSYSNKRDYDRAIADFTEAVRLDPKDRSAFAGRGFAHQTRQNYDLAIA
                     DYAEAIRLDPKSPRTWYNRGLAYAAKRDYDRAIADYTEAIGLDSKDAQAWQSRALSDY
                     AKQDYDRAVADFNEAIRLNPSNGSAIIGRGNAYYAKNDYDRAIGDYSEAIRLDPKNIR
                     AYSGRGGAHYIKRDYRNAIADYTEVIRLDPNDASAYTARGNAYNATGEIDRADTDFNQ
                     AKRLGTPPRR"
     gene            3223..3423
                     /locus_tag="VLJ17_06065"
     CDS             3223..3423
                     /locus_tag="VLJ17_06065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22579.1"
                     /translation="MPIRLKINLPESATIVIVSQKARPETVAPFEQSRKTNFRYLLDG
                     WTHPNNLSNHGGAVSRAAPQIS"
     gene            3733..4113
                     /locus_tag="VLJ17_06070"
     CDS             3733..4113
                     /locus_tag="VLJ17_06070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22580.1"
                     /translation="MRWFRSNRGGVAWLAFFALACQLLLSFGHVHVGKFSGGSAAWAA
                     AESGNASADVLPSSPQKNPTGLAGDFCAICANISLANTLVLPILAIILAPRLFTEILP
                     WSLAASEPALFDRLPFNARGPPHA"
     gene            4301..>5043
                     /locus_tag="VLJ17_06075"
     CDS             4301..>5043
                     /locus_tag="VLJ17_06075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013945733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ligand-gated channel"
                     /protein_id="HSV22581.1"
                     /translation="MFRSVRNELLLGSSAFAILAAVGAASAQQAGQPSPTVAPPNATP
                     IPQINVTAPRRTAARPARRPAGTPVAPAAAPPTPEQVQLQANQEVVQRTQTLDERRDG
                     VIMTKAGTSNYQLNAGDIQQIPQANAIQLSDLILQFPGVYQDSTTSGDFHIRNEHANV
                     QYRVNGILLPDGVSGFSQILESSFIGSMRLITGALPAQYGLHTSGIIDITTKSGAALA
                     GGSVSLYGGSRQTISPSFEYGGVEGNTEY"
BASE COUNT          994 a         1482 c         1475 g         1092 t
ORIGIN      
        1 acagcagcag aattggacat ggtgcgttaa cgcacagcac atctttgtgc cctatctcgt
       61 aatcgctggc tgcacagccg tgatccaatt gggccgagag acaccgcaaa accaagccat
      121 cgcctttgcg taccgcggga acgcatatcg agagaagggc gatcttgatc gagctctttc
      181 ggacttcaat gaagcgatca ggattaatcc aaggttttcc ctggctttta caaaccgcgg
      241 caacgtctat cgcacgaagg gcgacctaca cagcgcgctc gcagattaca acgaggcgat
      301 tcggcttgac cccaccgttg cgaaggcttt cgccaatcgt ggcagtttgt atcacgctat
      361 tggcgggttc gatcgcgcga tcgttgacct tggcgaagca atccggctcg acgccaacga
      421 tcccttcgcg cgcttcaatc gtggcacggc ctataccgct aaaggtgagt tcgacagcgc
      481 actcaccgac tacaatgagg caattcgcct atatccgacg ttttctatgg cattcaacaa
      541 ccgtggcgtt ctatttcgca acatagctga ccttgatcgc gccatcgcgg attttaccga
      601 cgctgttcgg ttcgatccat ggtctgcaat cgcctacaat aatcgcgcca tggtctgggc
      661 tcagaagggt gaactcggcc gcgccatcgc cgatttcact acggccatca cacttgatcc
      721 catttacgct ggagcgttcg tcggccgcgg ccaagccaag cagaaaatgg gtgacggttc
      781 aggtgcggag gccgatttcg aggcagcgaa ggcgatcaac cagagcgggc actgaggagt
      841 ttgtgaaacg cgatcgcata tgagttggct cgcgaaaatc gcccagcgct agccccgtca
      901 cggtctatcg cgcactcgaa ttcctggtgg agcaaggact gatccaccgg attgatagcc
      961 gcagtgcgta catcgcttgc gctcacaacc atgacagtga cgcaattgtg acatttctga
     1021 tatgcgacag gtgtggatcg gtcggcgaag cctccgctgc ggccatcgcg ccatttatcg
     1081 gtcatcgaaa tcaacggcac ctgatctcac taccgtcgcg gcggagttcc gagccgtttt
     1141 gcctggttga agtcagtatc tgcccggtcg atctctcccg tcgcattgta ggcattgccg
     1201 cgcgccgtat aggccgaagc atcgttggga tcaagtcgga tcacctcggt atagtccgct
     1261 atggcgttgc ggtaatcgcg cttgatgtag tgcgcgccgc cgcggccgct ataggcccga
     1321 atattcttcg gatcgagccg gatcgcctcg gaatagtcgc caatggcgcg atcataatcg
     1381 ttcttagcgt agtacgcgtt tccacggccg atgatcgccg agccattgct gggattgaga
     1441 cggatcgcct cgttgaagtc ggctacagcg cggtcatagt cctgctttgc gtaatcggag
     1501 agcgcgcggc tttgccaagc ctgggcgtct ttggaatcga gccctattgc ctcggtgtag
     1561 tcggcgatgg cgcgatcata gtcccgctta gcagcgtagg cgagcccgcg attgtaccag
     1621 gtgcgggggc tctttggatc gagccttatc gcctcggcat aatccgcgat cgcaagatcg
     1681 taattctggc gtgtctggtg cgcgaaaccg cgacccgcga aggcgctgcg atccttgggg
     1741 tcgagcctta ctgcctcggt aaagtcggca atcgcccggt cgtagtcgcg cttattggaa
     1801 tacgaattgc cgcggccggt aaaggcggca gcgtcacgtg cgtcgagcgc aatagctgcg
     1861 gtgaagtccg caatgctgcg atcatagtcc tgtttcaccc gataggcgac gccacggttg
     1921 taaaggctcg tgcgatcttt cgggtcgagc ctcacggctt cgctgtagtc agcgatggcg
     1981 cgctcataat cgcgtttggc ggaatacgca ttcccacgag ccgcataggc agaagctgcg
     2041 cccgagtcga ggcgaatggc ttctgtcaag tccgcgatgg cgacgtcata ttcttgcttg
     2101 gcgcgatacg cgatgccgcg gctgtagaag gcgttgcgat ttctcggatc aatccgaatg
     2161 atcgccgtaa agtccgcaat agcatcatca tattcgcgct tgcccgaata taacgcgccc
     2221 cgctcggcat gggcgcgtgg ttcgctcgga tcgagtttta tcgcctcggc atagtccgcg
     2281 atggcgcgat cgaagtcccc tttggcgcta aatgctgcgg cgcgatgata aaatgcgtcg
     2341 cgattgttgg gttcaaggcg gattacctgc gtgtaatcag cgatggcatc gttgtaatcg
     2401 cgtttcgcag agaacgaggt cgcacgacct gcatgggccc gaaccctgcc gggatcaagc
     2461 ctgatggcgt tggtatagtc ggcaatcgcg aggtcatgat tctgcttggc ggaatacgcg
     2521 atcgctctgt tgtaaaaggt cgaggcgtca gcgggattga gcctgatcgc ctcagttaaa
     2581 tccgcaatgg cgtggtcaaa ttgttgctca tagtagtaag caaacgctcg gctctttaag
     2641 aggccttgct ctgtaggagc aactttgagc gcctgcgtgt agtcggcaat cgcgtgatcg
     2701 taatccttct cctcaaaata agcattggcg cggccagagt acgcggcacc gttggcggga
     2761 tcgagtttaa tggccgccgt gtagtctgcg acggctcgcc cataatcgtg tttgctggag
     2821 tatgcggccc cacggttcct caagcttgac gggtcggtag ggtcgagcct tatagcctcg
     2881 ctgaagtcgg caatcgcacg atcgagatca cccaaggcca cgtacgtcag cgcgcggttg
     2941 ttgtagcccg gggcaaattt gggatccaag gcaatcgcct gatttaagct ggcgagcgcg
     3001 ctatcgaaat ctcgcttgtg gtagtgagca aggccgcgat tgttgaaggc aaacgccagc
     3061 tcctttccag cgtaagcatt agattcaatc agcgccgtgc agctacgtat ttgcaactcc
     3121 gacggggcac cgtccttgcc gccacatcga tctatatcct gttgaatttg ggcatgtggc
     3181 gaagtcacga gtagcaggct ggcgattaaa attgctggcg cgatgccaat ccgattgaaa
     3241 ataaatctgc ctgagtccgc gaccattgtc atcgtctccc aaaaagcacg ccccgaaacg
     3301 gtcgcaccgt tcgagcagtc aagaaagacg aattttcgtt acctgttaga tggctggacg
     3361 catccgaaca acctgagcaa tcatggcggc gcagtgagcc gtgctgcacc ccagatctcg
     3421 tgacgatgcc ggcttatttg aggtcggccg ccacttttgc gaggccggtc ctggcgcaag
     3481 cttgtccttg tcgccactca gcacaccgga aatgccgatt gcctcaatgg tttcttatcc
     3541 gaccacgacc ggcagcgcac cccgcgccgg gctgactgcg atgtcgatgg tgtgccggga
     3601 catgtgatgg aaatccgctc tgttgcgttc gcggcaatgt tgtcacagcg atgcgatgcg
     3661 gcaaatcctg gggacttcac aacgtgtggc gatttggata atctccacga ctcggaaggc
     3721 aggtcgcagc tgatgcgttg gttccgatcg aatcggggcg gagttgcgtg gctggcgttt
     3781 tttgcgctgg cctgtcagct tttgctgtcg ttcggtcacg tccacgtcgg caagttcagc
     3841 ggcggctcgg ccgcatgggc agcggcagag agcgggaatg cttcagccga cgttctgccg
     3901 tcctcgccgc aaaagaaccc gaccggcctt gcgggcgatt tctgcgccat ctgcgcaaac
     3961 atcagccttg ccaacacgct tgttctgccg attctggcga tcattttagc accccgttta
     4021 ttcaccgaaa tattgccgtg gtcattggcg gcgagcgagc cggccctatt tgaccgcctc
     4081 ccattcaacg ctcgcggccc cccccacgcc tgacataccg gcctgagccg gtcgccccgc
     4141 tcggattccg cgtgcgggga tttcaccgtg cttaacggct gaggcgcgat ccgttcgcgc
     4201 atgagcgcga cctcgatcgt gcggatcaaa ccatccggtc gttgtcagct ttggattcag
     4261 ctttcgcttt ccgtctctgt ccacatgggg gggcctaaca atgttcaggt cagttcgaaa
     4321 tgagttgctt ctcggcagtt cagcatttgc catcctcgcg gccgtcggcg ccgcgtcagc
     4381 gcagcaggcc ggccagccgt cgcctacggt tgcgcctccg aacgccacgc cgattccgca
     4441 gatcaacgtc accgccccgc ggcgcaccgc cgcgaggccg gcacggcgtc cggcgggcac
     4501 gccggtggcc ccagccgcgg ccccgccgac ccccgagcag gttcagctgc aagccaacca
     4561 ggaggtcgtc caacggaccc agaccctcga cgagcgccgc gacggcgtaa tcatgaccaa
     4621 ggctggcacc agtaactacc agctgaacgc gggcgatatc caacaaatcc cgcaggcaaa
     4681 cgccattcag ttgagcgact tgatcctgca atttccgggc gtctaccagg actcgacgac
     4741 ctcgggcgat tttcacatcc gcaatgagca cgccaatgtt caatatcgcg tcaacggaat
     4801 tctgctgccc gacggcgttt ccgggttctc gcagattctt gagagctcct tcatcggcag
     4861 catgcggctg atcaccggcg cgctaccggc gcaatatggc ctgcacacct ccggcatcat
     4921 cgacatcacc accaagagcg gggcggcgct ggcgggcggc agcgtcagcc tctatggcgg
     4981 cagccggcag accatatcgc cgagtttcga atatggcggg gttgagggaa ataccgaata
     5041 tta
//
LOCUS       DATILV010000260         2826 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4661422, whole genome shotgun sequence.
ACCESSION   DATILV010000260 DATILV010000000
VERSION     DATILV010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2826)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2826)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2826
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4661422"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..411)
                     /locus_tag="VLJ17_06080"
     CDS             complement(<1..411)
                     /locus_tag="VLJ17_06080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004609 - phosphatidylserine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HSV22582.1"
                     /translation="MSILVSIRSQMAPVNPEGYPFIGAFALASLVLMWLWSPLGWIGV
                     ILTAWCLYFFRDPPRVTPLRDGLVIAPADGRVSRIINAVPPAELALGDRPVPRISIFM
                     SVFDCHVNRSPITGRIERMAYRPGAFVNADLDKAS"
     gene            complement(575..2503)
                     /locus_tag="VLJ17_06085"
     CDS             complement(575..2503)
                     /locus_tag="VLJ17_06085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HSV22583.1"
                     /translation="MKREVSAEGGWLWRTLINLWPYIWPSERPDLQRRVLWSLVLLVA
                     AKLATIAVPFAFKFATDGLAHEENAAGNTWIAWVIAAPLLMTAGYGGTRILMAAFTQM
                     RDGIFAKVSMYAVRRLALLTFEHMHRLSLRFHLERKTGGLTRVLERGRNAIETIVRMV
                     ILQLIPTILEVVMIAAVLLYQFDWRYVVVIMITVALYMWYTYLATEWRIGIRRKMNES
                     DTDANTKAIDSLLNYETVKYFGAEERETVRYDRSMARYEKASVEAYVSLAVLNAGQAA
                     IFTLGLTVTMGLCVLGIRDGAHTVGDFVMINAMMIQLYQPLNFMGMVYREIKQAVIDI
                     EAMFALLGRDPEIKDAPGAKPLIVSAGAVRFENVCFAYEPARPILKGISFEVPAGRTV
                     AIVGPSGAGKSTISRLLFRFYEITGGRITIDGQDVREVQQTSLRNTLGMVPQDTVLFN
                     DTVRYNIRYGRWDATDAEVEEAAAHAQIDAFIRAAPKGYDTEVGERGLKLSGGEKQRV
                     AIARTILKGPPILVLDEATSALDSHTEREIQDALDRISRNRTTLVIAHRLSTIIAADE
                     IIVLDQGLIVERGTHQQLLAAGGLYASMWNRQREAEAARERLALVGEGEGAPNRNPPE
                     ISEIKISEAPPEIADAAE"
BASE COUNT          556 a          877 c          859 g          534 t
ORIGIN      
        1 gctcgccttg tcgagatcag cattcacgaa agcgcccggc cggtacgcca tacgctcgat
       61 gcggccggtg atcgggctgc ggttcacgtg gcagtcgaac acgctcatga agatcgagat
      121 acgcggcacc ggcctgtcgc cgagcgcaag ttcggccggc ggtaccgcat tgatgatgcg
      181 gctcacccgt ccgtccgcgg gcgcgatcac cagcccatcg cgcaacggcg tcacccgtgg
      241 cggatcgcgg aaaaagtaga ggcaccacgc cgtcaatatc acaccgatcc agccgagtgg
      301 cgaccacagc cacatcagca ccaagctcgc cagcgcgaag gcgccgatga aagggtaacc
      361 ctcgggattg accggggcca tctgagaccg gatcgagacg agaatcgaca tgctcatacc
      421 aacgtcaaaa ttaccgaacg aaccatgcag tggaagcgat gcggccacat ctcctagccc
      481 gggttgagcg ccagcgaaac cccggggcgg tattgccaaa gggcgttccc agattttccc
      541 tggcgctcaa tccaggctac gcggatcagt ttcatcattc cgcagcgtca gcgatttccg
      601 gcggcgcctc gctaatttta atctcactaa tttcgggcgg atttctgtta ggcgcaccct
      661 cgccctcgcc caccagtgca agcctttctc gcgccgcctc ggcctcgcgc tggcggttcc
      721 acatgctggc ataaagcccg ccagcagcaa gcagctgctg atgagtgccg cgctcgacga
      781 tcaggccctg gtcgagcact atgatttcgt cggccgcgat gatggtggag agccggtgcg
      841 cgatcaccag ggtggtacga ttgcgcgaga tccgatcgag cgcatcctgg atttcccgtt
      901 cggtgtggct gtcgagcgct gaagtcgcct catcgagcac cagaatcggc ggtcctttca
      961 ggatggtgcg ggcgatggca acgcgttgct tctcgccacc ggaaagtttg aggccacgtt
     1021 cgccgacctc ggtgtcatag cccttgggcg ccgcgcggat gaaggcgtcg atctgggcgt
     1081 gggcggcggc ttcctcgacc tcggcgtcgg ttgcgtccca gcggccgtag cggatattat
     1141 agcgcacggt gtcgttgaac agcaccgtgt cctgcggcac catgccgagc gtattgcgca
     1201 acgaggtttg ctgcacctcg cgaacatcct ggccatcgat ggtgatgcgg ccgccggtga
     1261 tctcgtagaa gcggaacagg agccgcgaga tcgtcgactt gccggcaccg gacggaccga
     1321 cgatcgccac cgtccggccg gccggtacct cgaagctgat ccccttgagg atcggccgtg
     1381 cgggctcgta ggcaaagcag acattctcga aacgaaccgc gccggcgctc acaataagtg
     1441 gcttggcgcc cggcgcgtcc ttgatctccg gatcgcggcc gagcagtgca aacatcgctt
     1501 ctatgtcgat caccgcctgc ttgatctcgc gatacaccat gcccatgaag ttgaggggct
     1561 ggtaaagctg gatcatcatg gcgttgatca tgacgaaatc accgaccgtg tgcgctccgt
     1621 cgcgaatacc gagcacgcac aaacccatgg ttacggtgag acccagggtg aagatcgccg
     1681 cttggccggc gttgagcacg gcgagcgata cgtaggcctc gacgctcgcc ttctcataac
     1741 gcgccatcga gcgatcatag cgcaccgtct cccgttcctc ggcgccgaaa tatttcacgg
     1801 tttcgtaatt gagcagcgaa tcgatggcct tggtattggc gtcggtatcg ctttcgttca
     1861 ttttgcggcg gatgccgatc cgccactctg tggcgagata agtgtaccac atgtaaagcg
     1921 cgaccgtgat cataatcacc accacgtagc gccaatcgaa ctgatagagc agcacggcgg
     1981 caatcatcac cacttccaga attgtgggaa tgagctgcag gatcaccata cgcacaatgg
     2041 tctcgatggc gttacggccg cgctccaaca cgcgggtcaa tccaccggtc ttgcgctcga
     2101 gatggaagcg cagcgacaac cgatgcatgt gttcgaaggt gagaagcgcg aggcgccgca
     2161 ccgcatacat ggagaccttg gcaaagatgc cgtcgcgcat ctgggtgaac gccgccatca
     2221 ggatgcgggt accgccatag ccggccgtca tcaacagcgg cgccgcgatc acccatgcga
     2281 tccaggtgtt gccggcggcg ttctcttcgt gcgcgaggcc gtcggtggca aatttgaatg
     2341 cgaacggcac cgcgatggtg gcgagcttgg ccgcgaccag cagcaccagc gaccacagca
     2401 cccgccgctg cagatcaggc ctttccgacg gccagatgta gggccacagg ttgataagcg
     2461 tgcgccacag ccacccaccc tcggcggaaa cctcgcgttt catagtgtgg ggagatcgaa
     2521 ggtgctcgct catgtgcgct tgttttgccg gtccgtctgt gacggaccgg tgagcgtccg
     2581 tcagacgatg aacatatagg cagttttcct ccagcaatca ctatgtgttt gacgcatggg
     2641 ccgggcgcgc ccgctgcgtg ttgcgcagta aatcacgcac atgcacagaa tgatcgtatt
     2701 gacgcagcgc ctcttctgcc tctccccgcc tgcgatcagg ggcgtttgcg cccgtttgac
     2761 ggtctatgga gaggatcctt ggggaccttt tcacaagctc agactcgtgg aaaggcccct
     2821 cggagg
//
LOCUS       DATILV010000261         2231 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1083525, whole genome shotgun sequence.
ACCESSION   DATILV010000261 DATILV010000000
VERSION     DATILV010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2231
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1083525"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1216
                     /locus_tag="VLJ17_06090"
     CDS             <1..1216
                     /locus_tag="VLJ17_06090"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV22584.1"
                     /translation="RGRWLAREDKKANKFSMSARGEYANNVMSGNEKNLEIGIEQDMG
                     VAAAREKHVSSMPAISRRTFLASGTAAGASLLLGQMAEAESSGGDDGLKEYDIATNGI
                     SLHVTEQGEGPAVLFCHGFPDTCYTWRRQMRAIASAGYRAIAPDMRGYGRSSAPADAT
                     LYTPLQTTGDLVGLLDALKVPSAVLVAHDWGAAHAWSAGLMRPDRFKALFCLSVPYVP
                     RGDISVFEKMRSSGYQNDFYMFEQMRPEADQIWADAAVTIPGILYWASGSAPADKRWS
                     PMDPARSLHRPAPGPLPTWAKPDYVAHNVAEFRRTGFHGGLNYYRAAELYFDLSAPWK
                     GAKITQPSFFIAGKVDSLEQLYPPADQLRPFVPALVGRLELDNVGHWVQHEASAEVSD
                     QLVKFLRIVRPV"
     gene            complement(1504..1674)
                     /locus_tag="VLJ17_06095"
     CDS             complement(1504..1674)
                     /locus_tag="VLJ17_06095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22585.1"
                     /translation="MMSSSPMENHGQVDRVATEAELNSIAGVVTNGIFARRPADVLLL
                     GSNSGIQTLTAK"
     gene            complement(1686..2075)
                     /locus_tag="VLJ17_06100"
     CDS             complement(1686..2075)
                     /locus_tag="VLJ17_06100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22586.1"
                     /translation="MKRMLLGAFAALVLGACAYKFQPVYNVDKPLPAQSLSLDRIESL
                     IMEAGSTLNWQFQRAGAGHLKATQQQPKFSALVDIYFDQQHYKIVKNTTTGLNDQGST
                     IHSHYNMWIRNLENSIDSKLALASIRP"
BASE COUNT          451 a          630 c          657 g          493 t
ORIGIN      
        1 gcgcgggcgg tggttggccc gagaagataa aaaagcgaat aagttctcaa tgagcgcacg
       61 gggagagtat gccaacaacg tcatgagcgg caacgagaaa aatttagaaa tcgggatcga
      121 acaggatatg ggcgtcgcag cagccaggga gaagcatgtg agttctatgc cagccatttc
      181 tcgccgcact ttcctcgcga gtgggactgc cgctggtgca agcttgctgc tgggtcaaat
      241 ggctgaagcg gaaagttctg gaggcgacga tggcctcaag gagtacgaca tcgctactaa
      301 tggcatctcc ttgcacgtaa ctgagcaagg ggaagggccc gctgttcttt tctgccacgg
      361 ctttccggat acctgctata cgtggcgccg acagatgaga gccatcgcgt cagccggata
      421 tcgagcaatt gctccagaca tgcgcggcta tggacgcagc tcagctccgg cggacgcaac
      481 cttgtacacg ccgctgcaaa cgactggtga tctggttggt ctgctcgatg cgctgaaggt
      541 ccccagcgcc gtcctcgtgg cccatgactg gggtgcggct catgcgtgga gcgccgggct
      601 gatgcgtcct gatcgattta aagcgttgtt ctgcttgagc gtgccttacg ttccccgtgg
      661 ggatatcagt gtcttcgaga aaatgcgtag ctccgggtac caaaacgatt tctacatgtt
      721 tgaacagatg cgaccggagg ccgatcaaat ttgggccgac gctgcggtta ccattccagg
      781 aattctgtat tgggcatcgg gttctgctcc agccgacaag cggtggagcc ctatggaccc
      841 tgcccgaagc cttcatcgtc cggcccctgg gccgttgcca acgtgggcga aaccagatta
      901 cgtcgctcac aacgtcgctg aattccggcg taccggcttt cacggtggcc tgaattacta
      961 ccgcgccgcc gaactgtatt tcgatttgtc cgccccttgg aaaggcgcga agatcaccca
     1021 accctccttt ttcattgcgg ggaaggtgga tagcctggag cagctctatc cacccgcgga
     1081 ccaactccgc cccttcgttc ccgctctcgt ggggcgtctc gaactcgaca atgtgggcca
     1141 ctgggtacag cacgaggcct cagccgaggt cagtgatcag ctcgtgaagt tcttgcgcat
     1201 cgtaagaccc gtctaactcg caaacgaaac agcacttagg gtctggtcga aacaatcgat
     1261 tcgcacgaag cgccccgacg ccgccgcagt tgcggacgat gagcgcgggc ccatcggcaa
     1321 gctttgtcac cggtgccagc atgacgatcg acggcggtta cgtggcctga cgccgatcga
     1381 tcgagggccg agccatcagg tccggcttgc tgatgattcg agctgatcgg caagggatgg
     1441 gaaattcctt ctcgccgaac gcggccggca gtgcaagcgt tgcaaatccg tagcggcctg
     1501 ggcctatttc gctgtcaggg tttggattcc tgaattggaa ccaagaagca gcacgtccgc
     1561 cggccgccgc gcgaagatgc cgttcgtcac cacgccggcg atgctgttga gctccgcttc
     1621 cgtcgcaacg cgatccactt gcccatggtt ctccattggg ctcgatgaca tcatgcgttt
     1681 ctgagctatg gtcggatcga ggctaaggcc agcttactat caatgctgtt ctcaagattt
     1741 cgaatccaca tgttgtagtg gctgtggatt gtcgagccct gatcgttcag gcccgtcgtt
     1801 gtgtttttta cgatcttgta gtgttgctga tcgaagtaaa tgtccaccaa tgcagaaaat
     1861 ttcggctgct gctgcgtggc tttgagatga cccgcgccgg cgcgctgaaa ctgccagttg
     1921 agcgtgcttc cggcttccat gatcaaggac tcgattcgat ccaaggagag actttgcgca
     1981 ggaagcggct tgtccacgtt gtataccggt tggaacttgt aggcgcaggc gcctaatacg
     2041 agagcggcaa atgcacctag caacattcgt ttcataggca ttcctcccga gagcaaggtg
     2101 atcggttcgc gcccgaattt catttccgca tgagggttct gacgcctttt tcatctccga
     2161 gaagtagcac gtccgccggc cgccgcgcga agatgccgtt cgtcaccacg ccggcgatgc
     2221 tgttgagctc c
//
LOCUS       DATILV010000262         1510 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2107687, whole genome shotgun sequence.
ACCESSION   DATILV010000262 DATILV010000000
VERSION     DATILV010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1510
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2107687"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..737)
                     /locus_tag="VLJ17_06105"
     CDS             complement(<1..737)
                     /locus_tag="VLJ17_06105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013947306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NmrA family NAD(P)-binding protein"
                     /protein_id="HSV22587.1"
                     /translation="MYAITGITGKVGGEVARTLSKAGYALRAVDRDPGKGAIWADLGC
                     DVAVAEMSDVVELTAAFSGASGVFVLLPPIFDPSPDFPETRATVAALRQALEDTRPAR
                     VVCISTIGAQAKRKNLLTQLSIMEQALGDLPIPITFLRPAWYMENCSWDVTAARDTGV
                     ISSFLQPLDKPVPMVATADVGRVSAELLQENWSGRQVIELEGPTRVSPNEIAATFAEI
                     IGHPVRAEAVPRASWEQLFKSQGMQHP"
     gene            complement(792..1241)
                     /locus_tag="VLJ17_06110"
     CDS             complement(792..1241)
                     /locus_tag="VLJ17_06110"
                     /inference="COORDINATES: protein motif:HMM:NF024854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HSV22588.1"
                     /translation="MHTWLVMMKAMQAITRYALANLEETGLGLSDFAVLEALLHKGPL
                     PVNVIGPKVNLTPGSISVAVDRLVAKGLVSRVECSQDRRVRIVALTPRGKSVITPIFR
                     AHAATMEKVFSGLSRDEMRQLEQQLKRVGKQAESLFDRSVAKGRTGK"
BASE COUNT          342 a          434 c          422 g          312 t
ORIGIN      
        1 atcggatgct gcatgccctg agacttgaag agttgctccc acgatgcacg agggacagcc
       61 tcggcgcgaa ccggatgccc gatgatctcg gcgaaggtcg ctgcaatctc attgggagac
      121 acgcgtgtcg gcccttcgag ctcaatgacc tgtcggccgc tccagttttc ctgaagcaat
      181 tcggccgaga cgcgcccaac gtctgcggtc gcgaccattg gcaccggttt gtcgagcggt
      241 tgcagaaaac ttgagatgac gcccgtatca cgcgccgcgg tgacgtccca actgcagttc
      301 tccatgtacc acgccggccg caggaaggtg atggggatcg gcaaatcgcc cagtgcttgc
      361 tccatgatgc tcaactgcgt cagcaggttt ttccgcttcg cctgtgcgcc gatcgtcgaa
      421 atgcagacaa cccttgctgg acgggtgtct tccaaagcct gtcgcagtgc ggcaaccgtc
      481 gcccgagtct cggggaaatc cggcgacgga tcgaagatag gcggaagcag cacaaacacg
      541 ccggaggccc ctgagaatgc ggctgtgagt tctacaacgt cgctcatttc agcgaccgcg
      601 acatcgcaac ccaaatcggc ccagatagcc cctttgccgg ggtcgcggtc cacggcgcga
      661 agggcgtagc cggctttcga aagagtgcgg gcaacctcac cgccaacctt tccggtaatt
      721 ccagtgatgg catacatgat tgactccttg tcagtgcgcg cagaggccgg acggctctgt
      781 gctccgaccg cctatttacc agtgcgacct tttgcaacgc ttcggtcaaa gagcgattcg
      841 gcttgttttc ccacgcgctt caattgctgt tcgagttgtc gcatttcgtc acgcgaaaga
      901 ccggaaaaca ctttctccat cgtcgccgca tgggcgcgga aaattggcgt aatgacggat
      961 tttccacggg gtgttaaggc aacgatgcga accctgcggt cctgggaaca ctcgacgcgg
     1021 cttactaagc ctttggcgac aagccggtcg accgccacgc tgatcgatcc gggcgtcaga
     1081 ttgaccttcg gaccgatcac gttgacgggt agcggtccct tgtgaagcag ggcctcaagg
     1141 acggcgaaat ccgaaagccc caagccggtt tcttcaaggt ttgccagggc atatcgcgta
     1201 atggcttgca tggccttcat catcaccagc caggtatgca cgggtgccgc agtgtctttc
     1261 ttcatggaag ttacccaatt ttcgggaaag ttacccaagc aaacccttaa ctataccatc
     1321 aaatcaatta tattgaaatc aagataattg acttcaatga agatgggcca atacgattca
     1381 ttgacgacgt aactggccgg atcgattcca tggcaagttc gagggcaagc gtcgaacgac
     1441 acaaggcaag gaatagaaag gaatagacat gtcaaccaac gatcgaaaac tgatcgccgt
     1501 gatcggcgca
//
LOCUS       DATILV010000263         3005 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3640196, whole genome shotgun sequence.
ACCESSION   DATILV010000263 DATILV010000000
VERSION     DATILV010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3005
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3640196"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            293..724
                     /locus_tag="VLJ17_06115"
     CDS             293..724
                     /locus_tag="VLJ17_06115"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSV22589.1"
                     /translation="MAMIENVTPILRVENLEASRRYYIQTLGFSLDWDTDGAISVSRD
                     GKSIMLCEGEQGQPGTWLWIGVEDADALYAEFLAKGAHIRSPPQNFSWAYEFEVADLT
                     AMFFALGLGRSLDRPTEISSLDLTSSLVPAIGVVSRPRLGG"
     gene            727..1122
                     /locus_tag="VLJ17_06120"
     CDS             727..1122
                     /locus_tag="VLJ17_06120"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSV22590.1"
                     /translation="MLLNLNQIGQIALAVGDVDQAEAFYGEQLRLRKLYRFGDLSFFD
                     CAGVRLMLEKAGKLEDIQRSSVIYFRCADIALTVRELKDRSVPFVQEPHLIAEMDDHD
                     LWMAFFKDPDGHVLAVMQEAPKGYTASQS"
     gene            1938..>3005
                     /locus_tag="VLJ17_06125"
     CDS             1938..>3005
                     /locus_tag="VLJ17_06125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013217160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22591.1"
                     /translation="MVGSQAQGPFGTCEDAAELAVLPSPIAPWKGAPLRVIFAAEKSL
                     EGELSLIAPNGSIAAKSRERHGGPPYFWFAEVASPAAGTWHAKLARDRAPAECSTITR
                     EIVVRGAEPPRPRATEGSVWPARNVWNRATENLYSAWIEKLFDAPLDAAPSWPALHVV
                     LRDRSRNFLFNHLGLGEDQMGLVIRPDCADLPYFLRAYFAFKIGLPFGYAKCTRGGGG
                     EPPKCPVWWNIQNEEPRAAPPEETMSDPVVDMFRQPAANPTSRLGVTPPRFAARPPGF
                     GPPPGLPGMLPGPAAKPPPGPPPRPPGLAASFGHYLRWSIADGVHSGSGRTRLSDEST
                     DLYPVPLKQETLRPGTVYADPY"
BASE COUNT          584 a          852 c          956 g          613 t
ORIGIN      
        1 gggcgtcact gtaggagaga ggaaggaggg cccttcgggt tcggcgatca ggtgctgatc
       61 tcaagccacc gccacgaacc ttcaacctgt gccccagagg tgagatggcc acgatgtctg
      121 atttctgatc gcactcgggg aaaaaacggc aggaggcttg tgatacgaag taccgcggca
      181 atccggcatt tgaaatcaaa tgacaaggcc cggccgatgg aacccaacca tctgagtcgt
      241 gtttgttatt ctgtggaatt cccggaatgg ggcgactctc cggagatgca ccatggccat
      301 gatcgaaaat gtgacgccga tcctgcgggt cgaaaatctc gaagcgagcc gacgctatta
      361 catccaaacg cttggttttt cattggattg ggatacagac ggggcgatct ccgtgtcgcg
      421 cgatggcaaa tcgatcatgt tgtgtgaagg cgaacagggc cagccgggca cttggctctg
      481 gatcggcgtc gaggatgctg atgcacttta tgccgaattc ttggctaagg gcgcgcacat
      541 ccgaagcccg ccgcagaatt tcagctgggc ctacgagttt gaggtcgcag acctgacggc
      601 catgttcttc gcattgggtc tgggccgaag tctcgaccgg ccgacagaga tttcaagtct
      661 tgatctcacg agctctcttg ttccggcaat tggtgtggtg tcgcggccgc gtttaggagg
      721 ttgaaaatgc ttcttaactt gaatcagatc ggacagattg ctctagcggt tggtgatgtg
      781 gatcaggccg aagcgtttta cggcgaacag ctaagattga gaaaactata ccggttcggt
      841 gatctaagtt tttttgactg cgccggcgtc cggttaatgc tagagaaggc gggcaagctt
      901 gaggacatcc aacgcagctc ggtgatctat tttcggtgtg ccgatattgc cttgaccgtc
      961 cgcgaactta aagaccgcag tgtgccattt gtccaagagc cacacctcat tgcagaaatg
     1021 gacgaccacg atctttggat ggcatttttt aaagacccag acggacatgt acttgcggtc
     1081 atgcaggaag cgccgaaagg ctacaccgca tcacagtcat gattgatgat tgctgagacg
     1141 gacgatcatt caacacaggt cgaggtgacc cggaccggat atcgcaaagc gccttgatgc
     1201 tttgtaggct ggatggaaat cctgaatccg gcacctgcat agggggtctt tgatcgctga
     1261 tcccggcgac aagatgaaag accgtcaatt gaggtcatga tgcggttgcg attgcagatg
     1321 ctcatgcccg tctcggccag gtgcagttgg aacaggcaga tgtcctcaat ggtagctgtg
     1381 tcaggggacc gcttcaaaaa tgcggcgaac cgttgcagct atagatatgg ctcctctgcg
     1441 tgtgcgcacc aagcgtgcgc gcgttcatgt cccgatcatg cgctggcgca gcgggctgat
     1501 ggaatccgta ctcataggca actctgggat gaggtggacg acacctcgat cctcgagaca
     1561 ggacgcagca gccgctatcg atcatctccg gttaccaccc tcccagtcgc cgcccgcctc
     1621 ggcggcctat cgcgcagcga tttcgtgcgc taggactgag cgtggcgccg gcacggcggg
     1681 actacgacag cattcgcatg aaatgcggac gagatttgct cgccgcgaag ccttcggccc
     1741 atggtctaga ccgcaccctg aggccaggcg ctgacgatgg acttgccatg attcagccaa
     1801 agcgttccaa tatcactcaa ttggcattcc ggatgggatt ccggaggggg atcaaattgc
     1861 ctctagcacg ccagtttgct gctgctgtga aggcatcgtt gccggtcgcg ggcgcattgt
     1921 gcgtctttct tttctcagtg gtgggctcac aggcccaagg tccgttcggc acctgcgaag
     1981 acgcggctga gctcgcggtc ttgccctcgc cgattgcgcc gtggaagggc gcgcctttgc
     2041 gcgtcatctt cgccgcggag aagtcgctcg agggcgagct ttcgctgatt gcgcccaacg
     2101 gaagcatcgc ggccaaatcg cgtgagcggc acggcgggcc gccgtatttc tggttcgccg
     2161 aggtcgcctc gccggccgcg gggacgtggc acgcgaagct cgcgcgcgat cgcgcgccgg
     2221 ctgagtgcag cacaatcacg cgtgagatcg tcgtgcgcgg tgccgagccg ccgcggccgc
     2281 gcgcgacgga ggggagcgtc tggccggcgc gcaatgtatg gaatcgggcg acggaaaact
     2341 tgtattctgc atggatcgag aagctgttcg acgcgccgct cgacgcggcg ccgtcgtggc
     2401 cggcgctaca tgtcgtgctg cgcgatcggt cgcgcaactt cctgttcaac cacttgggtc
     2461 tcggcgaaga ccagatgggg ctcgtcattc gccccgactg cgccgatctc ccgtacttct
     2521 tgcgcgcgta cttcgcgttc aagatagggc taccgttcgg atatgcgaag tgcacgcgcg
     2581 gtggcggcgg cgagccgccg aagtgtccgg tgtggtggaa cattcagaac gaggaacctc
     2641 gcgctgcccc gcccgaagaa acaatgtccg accccgttgt ggacatgttt cgccagccag
     2701 ccgcgaatcc gacgagcaga ctcggggtga cgccaccgcg atttgcggcg aggccgccgg
     2761 gatttgggcc gccgccgggg cttccgggga tgctgccggg acccgcggcg aagccgccgc
     2821 cgggacctcc gccgagaccg ccggggctcg cggcgtcgtt cggccattat ttacgctgga
     2881 gcatcgccga cggcgtccat tccggatccg ggcgaacgcg gttgagcgac gaaagcaccg
     2941 acctttatcc cgtgccgctg aagcaggaga cgctgcgccc ggggaccgtg tatgccgatc
     3001 cgtac
//
LOCUS       DATILV010000264         1666 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_572755, whole genome shotgun sequence.
ACCESSION   DATILV010000264 DATILV010000000
VERSION     DATILV010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1666)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1666)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1666
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_572755"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..321)
                     /locus_tag="VLJ17_06130"
     CDS             complement(<1..321)
                     /locus_tag="VLJ17_06130"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HSV22592.1"
                     /translation="MSVNELQALANQFADAFDQRDLKTLLGMLSDDLEVFDHVPFRFD
                     GKPLFAKYLNEVVEGLASASFGFRQPSCRVYGDTVGIVNAHDMFTGVTKDGKIISIHG
                     RTTLV"
     gene            730..1554
                     /gene="groEL"
                     /locus_tag="VLJ17_06135"
                     /pseudo
     CDS             730..1554
                     /gene="groEL"
                     /locus_tag="VLJ17_06135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509708.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
BASE COUNT          380 a          463 c          511 g          312 t
ORIGIN      
        1 gaccaaggta gttcggccat ggatcgagat aatcttgccg tctttcgtta ctcccgtaaa
       61 catgtcgtgg gcatttacga taccaacggt atcgccatac acgcggcacg atggttgccg
      121 gaagccgaag ctcgctgagg ccaagccctc caccacctcg ttgagatact tggcgaagag
      181 cggcttgccg tcgaatcgga acggaacgtg gtcgaacacc tccaggtcat cagaaagcat
      241 ccccagtaag gtcttgaggt cgcgctgatc gaaagcgtcg gcgaactggt ttgctaaggc
      301 ttggagttca ttcacgctca tgtttgtgtc tcctctgata agttagacac acgccgcggc
      361 acactgtgac agaactatat cgccaaactt gctcaccgcc ggggcactgg ccagcggagg
      421 ctcctatcgg attgtgctcg gatgacgggc aatccggagc ttattcgtcg tccgtcggat
      481 taataccgac aaacgcgctt gtattgactg ggctcctacc ttccgggtgg tcggataacc
      541 ggaaactagg ttttgcaagt gagtcggaac gggtttggtc cggatagatg ttgagaaatc
      601 cgcttaccac caacaatctc ataacgagat acgtggtgcg aatccctgtg ggtgttgaaa
      661 aagtcggttt ttctgaaaat agtcgaaaat cgggtgatag aaaatgttta ggaaacgcgg
      721 cacgctgcag ggtgcgctgc cgtgaaggca ccgggctttg gcgaccgccg caaggccatg
      781 ctcgaagaca tcgccatcct caccggcggc aaggcgatca ccgaggacct cggcatcaag
      841 ctcgagaacg tgaaggtcga ggaactgggc cgcgccaaga aggtcacgat tgacaaggac
      901 aacaccacga tcgttgcggg cgcgggcaag tccagcgaaa tcgaaggccg catcaagcag
      961 ctccgcgcgc aaatcgaaga ggccagctcg gactacgaca aggagaagct ccaggagcgt
     1021 ctggcgaaac tcgtcggtgg cgtcgcagta attaaagtgg gcgcggccac cgagaccgag
     1081 ctgaaggaaa agaaggctcg cgtcgaggac gccatgcacg caacccgcgc agcggtcgag
     1141 gaaggcatcg ttcctggcgg cggtaccgct cttctgcgct gcctgccggc cctagaaaag
     1201 ctcaagcttc acgaagatga agcgatcggc gtgaacatcg tgaggcgttc cttggaggag
     1261 ccgacgcgcc agattgccca gaacgcgggc cacgaaggcg ctgtcgtggt cggccgcgtc
     1321 cgcgattcaa aggatgagaa tttagggttc aacgctgagt cgggcgaata caccgacttg
     1381 gtcaaggctg gggtgatcga ccctgccaag gtcactcgtt tggcgttgca aaacgccgcg
     1441 tcaattgccg cgctgatgct gaccaccgaa gtcctagtcg ccgacatcaa ggaagaggaa
     1501 acaagggtcg cggcaggcgc gggccatggc ggcggcatgg ggggaatgta ctgagcccct
     1561 gtgccaacct ttttcgcgtc tcatctgtgc caccggggcg aacccctccc cggactctgg
     1621 tcgcggcgga ataggtcttc cccaatcccg aggaccgtcg cactct
//
LOCUS       DATILV010000265         1781 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2108178, whole genome shotgun sequence.
ACCESSION   DATILV010000265 DATILV010000000
VERSION     DATILV010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1781
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2108178"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..851
                     /locus_tag="VLJ17_06140"
     CDS             <1..851
                     /locus_tag="VLJ17_06140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013214414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ferritin family protein"
                     /protein_id="HSV22593.1"
                     /translation="DYPATAQIFKEMEAEEDEHRRKLIEDYRRRFGEHIPLIRREDVK
                     GFVHRKPVWMIRPLGIKTVRNQAEVMETETRRFYERAAGKVSDASTRKLLGDLAEAER
                     KHVTLADNLEKEYLTPEVKAQEEKAHRRLFVLQIVQPGLAGLMDGSVSTLAPVFAAAF
                     ATHNSHAAFLVGLAASVGAGISMGFAEAASDDGSLTGRGKPLLRGFVCGLMTTAGGIG
                     HTLPYLIPSFRTATAIAVVIVAIELLAISWIRNRYMDTPFLRAAFQVIVGGVLVFLVG
                     IWIGSS"
     gene            complement(863..1708)
                     /locus_tag="VLJ17_06145"
     CDS             complement(863..1708)
                     /locus_tag="VLJ17_06145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22594.1"
                     /translation="MVDGHEVPNPTGQYENSSITQLVAGYTINDRFALQLNTPLIYRE
                     FKRPEGFAIDRGTVGGLGDMSILLKAVAFRYASPGRRTFEFRDGKNPVAVDQEPDFTA
                     SLVLLAGLKFPTGDSSRIKEEFHEVNVPGAPESGIHGHDLTLGTGSYDGIFGQQISLR
                     YRNFFAEETIQFALRGDGLHQYHFANDLSWDSGPGYYFIRNPQTIAGLQFVISGEHKD
                     VDRFRGKPAEDTGITSVFVGPRAVASWRRWSAELDVDLPVLIDNTALQVVPDYRLRAG
                     ISLQF"
BASE COUNT          402 a          499 c          503 g          377 t
ORIGIN      
        1 ctgattaccc ggcgaccgcc caaatcttta aggaaatgga ggcggaagaa gatgagcatc
       61 gccgcaaatt gattgaggat tatcgtcgcc gctttggaga acacatcccg ttaatccgtc
      121 gcgaagacgt aaaggggttc gtgcaccgca aaccggtgtg gatgatccgg ccgctgggaa
      181 tcaaaaccgt tcggaaccag gccgaggtaa tggagacgga aacccgacgt ttctacgagc
      241 gcgcagccgg taaagtcagc gatgcgtcga cgcggaaact gctcggagac ttggcggagg
      301 cggagcgaaa gcatgtgact ctggccgaca atctcgaaaa ggaatacctg actcccgaag
      361 ttaaggctca agaagagaag gcccatcgcc ggttgttcgt cctgcaaatc gtgcagccgg
      421 gactggcggg actcatggac ggttcggtct caaccctcgc gccggtcttt gcggcggcgt
      481 ttgcgaccca caacagccac gccgcattcc tggtcggcct cgctgccagc gtcggagctg
      541 gaatttcaat gggtttcgcc gaggcggcgt ctgatgacgg cagcctgacc ggccgcggca
      601 aacctctgct tcgtggtttc gtctgcggct tgatgacgac cgcaggggga atcggtcaca
      661 ccttgccata tctgattcca tcttttcgaa ccgctacggc catcgccgtt gtgatcgtgg
      721 caattgaact tctggccatc agctggattc gaaaccgtta tatggacacg ccgtttctcc
      781 gcgccgcgtt tcaagtgatt gtcggaggag tgctggtgtt tctcgtcggg atttggatcg
      841 gaagctctta atcgcttcgc gctcaaaact gcaacgagat tccagcccgc agacggtaat
      901 cgggaacgac ttgaagcgcg gtgttgtcaa tcaacaccgg aagatcgaca tctagctctg
      961 cgctccatct tcgccacgag gcgaccgctc gcgggccgac aaagaccgaa gtgatgccag
     1021 tgtcctcggc cggtttgcct cgaaagcgat cgacatcctt gtgttcgccg gaaataacaa
     1081 actggagccc ggcaattgtc tgagggttgc ggatgaagta gtagcccggg ccgctatccc
     1141 aagacagatc gttggcaaaa tgatattggt gcaacccgtc gccgcgcaat gcgaattgaa
     1201 tcgtctcctc ggcgaaaaag tttctgtaac gcagagatat ttgttgtcca aaaatgccat
     1261 catacgagcc agtgccgaga gtcagatcgt gcccgtgaat gccgctttcc ggtgccccag
     1321 gcacattgac ctcgtgaaat tcttctttga tccggctgct atcgccggta gggaatttta
     1381 acccagcgag caataccagc gacgcggtaa aatcgggctc ctgatcaacc gcaactggat
     1441 ttttaccgtc tcgaaactca aatgtcctgc gcccgggaga cgcataacga aacgcaactg
     1501 cttttagtaa gatcgacata tcgccaagcc ctcccacggt gccgcgatca atggcgaacc
     1561 cttccggccg tttgaattcg cgatagatca gcggtgtgtt gagctggagc gcgaaacggt
     1621 cgttaatagt gtaaccggcg accaactggg tgatggagct attctcgtac tggccggtcg
     1681 gattcggaac ttcgtgccca tccaccaaca cggttccaaa gtgagtgaac tgctccgcga
     1741 ccgcgccata aaatccgttc caccattgcc gcgacgcact c
//
LOCUS       DATILV010000266         1829 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1596446, whole genome shotgun sequence.
ACCESSION   DATILV010000266 DATILV010000000
VERSION     DATILV010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1829)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1829)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1829
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1596446"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            725..>1829
                     /locus_tag="VLJ17_06150"
     CDS             725..>1829
                     /locus_tag="VLJ17_06150"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HSV22595.1"
                     /translation="MRKKFLDQSIVSRRDFLKGVTLTGAAALATPVVSARAQQSPTTE
                     HERVVPQPNIGAETQPPPKDPVTQTTSGGDFMAEVLNTLDIDYLAMNCASSFRGLHEA
                     IINHTRNKPEILTCPHEEIAVSMAQGYAKIEGKPIAMICHGVVGLQHATMAIYNSWCD
                     RMPVYIMIGNIVEADKRAPGAEWVHSAIDPAALVRDFVKWDDQPASLQHFAESAVRAY
                     KVAMTPPMAPVLLSLDAELQENPIADRDRLRIPKLTKVVPPVGDSGAIAEAAKMLVAA
                     QNPALICDRMSRTPAGMTRLVELAEALQCAVIDQAGRMNFPSRHPLNQTFRRAAVVGE
                     ADIILAIEMNDLYGAVNSFSDRIVRTTRPIFKRD"
BASE COUNT          379 a          555 c          530 g          365 t
ORIGIN      
        1 gccaagcgat catcgccact cgccatttcg ttcgccgcat catacggtct ccgatgccgg
       61 cctagtgggc ggccggcacc gttctcaagc ctggcgaggt ttcgctcgca cacaacggcg
      121 ttgtctttcc ttgcgcgatg aactaccgga attcaggcgc acaggtgttg gaaatgatct
      181 ctgctcacct tggacgttaa cggagattta actgaacgac gcctcagtct cgtcttgtag
      241 gatgaagtcg taggattcaa ttcgattaca cgggcaacga cgtgtcaagg aaatctagcg
      301 ctcaacgacg tgctgtatca ggcagtcgat ccgcgattca cctcgtcggt gcgggcggct
      361 attcaccatg cccgaatgaa ctcaccgcta cgcgggtcag gcgcggttcg taaagcgagc
      421 gtcgggactg cacaagacgg tgctcgcgcg cttcttcatg gaggggcgcg gcgatttctg
      481 gtcctggagt tagcttagtt aggttttgcg ctccaggtct ttacattctc atccgctagt
      541 cgtatattcc gcgcgaatcc gtcatcgttc accttgataa cgcaacacgg acaaaataca
      601 ccgtgttgcg ttgccagcgt cgctcaaaac aacccgagca ctcgcgagct gcctgctcca
      661 cacgcgggcg cgcgacctgt gccgcagaat ggttttcctg tcggtcaccg gaagggagga
      721 gcagatgcgt aagaaattcc ttgatcagtc tatcgttagt cgtcgcgatt tcctgaaggg
      781 cgtgacgctc actggtgccg ctgccctagc cacgccggtt gtttcggcca gggcgcagca
      841 atccccgacc acggaacatg aaagggttgt cccacagccg aacatcggcg cagaaacgca
      901 gccgccgccc aaggatccgg tgactcaaac caccagcggc ggtgacttta tggcggaggt
      961 gctcaatacg ctcgacatcg attatcttgc catgaattgc gcttcgagct tccgcggcct
     1021 gcacgaagcg ataattaacc acacccgaaa caaacccgaa attctcactt gtccacatga
     1081 ggagatcgcg gtctcgatgg cacagggcta tgccaagatc gaaggcaagc cgatagccat
     1141 gatctgccat ggcgtagtcg gactgcagca tgcaaccatg gcgatataca actcctggtg
     1201 cgaccggatg cccgtctata tcatgatcgg caacatcgtg gaggctgaca agcgggcgcc
     1261 gggcgccgaa tgggtgcatt ccgccatcga tcccgccgcg ctggtgcgag actttgtcaa
     1321 gtgggacgat caaccggctt cgctgcagca tttcgcagag tcagcggtgc gcgcgtacaa
     1381 agtggcgatg acgccaccga tggcgccagt gctgctgtcg cttgacgccg agctacagga
     1441 aaatccaatt gcggatcgcg accgcttgcg catcccgaag ctcacgaagg tcgtgccccc
     1501 ggtgggcgac tcgggggcca tcgccgaagc ggcaaagatg ctcgtggcgg cacagaatcc
     1561 ggccctgatc tgcgaccgca tgtcgcgcac gccggccggc atgacgcggc ttgttgaact
     1621 cgccgaggcg ctgcaatgcg cggtcatcga ccaggccggc cgcatgaact tcccgtcgcg
     1681 gcatccgctc aaccagacct ttcgcagagc ggccgtcgtc ggcgaggccg acatcatact
     1741 ggcgatcgaa atgaacgatc tttacggcgc cgtcaactcg ttcagcgatc gtatcgtgcg
     1801 caccacgcgg ccgattttta agcgcgaca
//
LOCUS       DATILV010000267         1805 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_831391, whole genome shotgun sequence.
ACCESSION   DATILV010000267 DATILV010000000
VERSION     DATILV010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1805
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_831391"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            87..>1805
                     /locus_tag="VLJ17_06155"
     CDS             87..>1805
                     /locus_tag="VLJ17_06155"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HSV22596.1"
                     /translation="MIDAQERVSGRINYVLNVELPGMLSGKILRSPFPHGRVVRADAS
                     RAERLAGVGAVLTRGDFIGPTGFNGKYGRIFRDQTVVALDKVRFVGDPVAAVAAVNDD
                     IAAEALSLIEVEYEELPAVFDEEEALKPTAPLVHDPRPEQQPMFSKLIQDLPAGSNLC
                     SHFKLRHGDVEQGFREADFVFEDVFRSPAAQHVPLEPHVTVAQFFQGKLTIWTSTQMP
                     HAIRSQMAELFNLPLARVRVIVETLGGGFGSKGSLRLEPITSFLALKANRPVKILLKR
                     EEEFVTVCKHPATIRIKTGVKNDGTLVARRVNANFNTGAYSDIGPVVARNGGSAMSGP
                     YKIPHVWIDSCAVWTNVVPAGALRGFGVPQAVWAYESQMDLIAERLALDPVEFRRKNL
                     LRDDDFFATGEKLVDMHYDELLDHAAASLQWTSSDARWLKKDRPSQEKDIVRRGKGLA
                     LVIKATITPSTSAAALKLNEDGSLNVLTSSVELGQGAKTVLAQIAADALQVPMSRVSV
                     SDPDTELTPYDQQTSSSRTTFSMGGAIGKAAADLKRQLFDYAAELLEASVTDLVLEEG
                     RVAVRGT"
BASE COUNT          373 a          518 c          548 g          366 t
ORIGIN      
        1 atggctcggc gggccatcca acaggcgatg gccggcaact aatagaattg gaaatcattg
       61 tgtcagccgt tgggcagacc ctacccatga tcgacgcgca agagcgcgtt tccggccgca
      121 tcaattatgt gctcaatgtc gagctgcccg ggatgctttc cggcaagatc ctgcgcagcc
      181 catttcccca tggacgggta gttcgagcgg atgcgtcgcg cgcagaacgg ttagcaggag
      241 taggcgccgt gttgacgcgc ggcgatttca tcggtcccac cggctttaac ggaaagtatg
      301 gaaggatctt tcgcgaccag accgtggtgg ctttggacaa ggtgcgcttt gtcggcgacc
      361 ccgtagccgc ggtggcagcg gtgaacgacg atatcgcggc ggaggcctta tcgctcatcg
      421 aagtcgagta cgaagagctg cccgccgtgt ttgatgaaga ggaggcgctc aagcccaccg
      481 cgccgctcgt ccacgatcct cgcccagagc agcagccgat gttcagcaaa ttgattcaag
      541 atctccctgc cgggagcaac ctttgcagtc acttcaagct ccgtcacggc gatgtggaac
      601 aggggtttcg cgaggctgat tttgtttttg aggatgtctt ccgctcgccc gcggcgcagc
      661 atgttccact ggaaccccat gtcaccgttg cccaattctt ccagggaaag ctgacgatat
      721 ggacctcgac gcagatgccc cacgcgatcc gttcgcaaat ggctgagctg ttcaacctgc
      781 cgctggcgcg agtcagggtt attgtcgaga ccctaggcgg cggcttcgga tcgaaaggtt
      841 cgcttcggtt ggagccgatc acttcgttct tggcgttgaa ggccaaccgt ccggtcaaga
      901 tccttctcaa aagggaagaa gagtttgtta cggtgtgcaa gcaccccgcg acgatccgga
      961 taaaaaccgg cgtcaagaac gacggcacac ttgtcgcccg ccgagtgaat gcgaatttta
     1021 ataccggcgc gtatagcgat attggaccgg tcgtcgcgcg caacggcggt tccgccatgt
     1081 ccgggccgta caagattcct cacgtgtgga tcgactcatg cgcggtctgg accaacgtcg
     1141 tgccagcggg agcgctgcgc ggcttcggcg tgcctcaagc cgtttgggcc tatgagagcc
     1201 agatggatct gatcgccgaa cggcttgccc tggatccggt cgaattccgc cggaagaatt
     1261 tgcttcgcga tgatgatttc ttcgccaccg gcgagaaact cgtcgacatg cattacgatg
     1321 aacttttgga ccacgctgcg gcctctctgc agtggacatc gagcgatgcg cgctggctta
     1381 agaaagatcg cccttcgcag gagaaagaca tcgtgaggcg cggcaaggga ttggcgctgg
     1441 tgatcaaagc gacgattacc ccttcaacct ccgcggcggc gctcaaatta aacgaagacg
     1501 gcagcctcaa tgttctcacc agcagcgtag agctcgggca gggcgcgaaa accgtattgg
     1561 ctcaaatcgc ggccgatgcg ctgcaggtgc cgatgagccg ggtctcagta tccgatccag
     1621 acaccgaact gacgccctat gatcaacaga ctagctcgag ccgcacgact ttttctatgg
     1681 gcggcgccat cggcaaggca gccgccgacc tcaagcggca gttgttcgat tacgcagctg
     1741 agctgctcga agcatcggtg accgacttgg ttctcgaaga gggcagagta gcggttcgcg
     1801 gtact
//
LOCUS       DATILV010000268         7800 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_61994, whole genome shotgun sequence.
ACCESSION   DATILV010000268 DATILV010000000
VERSION     DATILV010000268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7800)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7800)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7800
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61994"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            9..4181
                     /locus_tag="VLJ17_06160"
     CDS             9..4181
                     /locus_tag="VLJ17_06160"
                     /inference="COORDINATES: protein motif:HMM:TIGR02353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904091 - non-ribosomal peptide synthetase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Pls/PosA family non-ribosomal peptide
                     synthetase"
                     /protein_id="HSV22597.1"
                     /translation="MDRLSDQIAMLLHRRGIGPGSLVALYSEKSLRLFAAMLGVLKAG
                     AGYVPIDPRFPIARVQSIVADAEVRIVFSDGALARHLAPHVSAEVLCLEEELERNIEI
                     APPLAPVAISPEDACYVIYTSGSTGQPKGVVIEHRNAVNFVRSLRSLYGLTEKDRVYQ
                     GFSIAFDASVEEIWGALSVGGTLVVPNGETSRSAFDAAEFINANKITFFSTVPSFLAV
                     LPAELPTVKLLVLGGEACPPELVTRWATPGRRMLNTYGPTEATVVATASECIAGAPVM
                     IGNPLPGYETFVLDERLRPVNPGECGELYIGGESVARGYLNRPELTAERFISNPFAAD
                     RLLSDRLYRTFDLVRRHDGGGLQFIGRADGQIKIRGFRIELSEIEAVLMEHPAVRAAA
                     VKLVEFGPQRELAAYVVLESHVEGLDRESVVALLRNRVPDYMVPRYLDIIQELPALTS
                     GKVDRDRLPAPCSILGSNNRNIVPAATALEQTVVETLEKEFQVSPISVEADFFLDLHG
                     HSLNAARVVTALRTRLDTVQVSVRDLYTNRTARLLARHLDNLGVGSERPAITPRAVPH
                     PQAASDSQPRSTWFRYPCAILQLLGLLAFYGCVSAPLALTVVLVIEVCNGGVELGTAL
                     DLATTASFLVWPSWLGLSIALKWIVIGRYKPGRYRVWGAYYFRWWLVNRFQSLSWSQM
                     FVGTPLMSLYYRAMGAKIGKNCTIGTPICTAFDLISIGDGSSIGLDTHILGYRIEDGW
                     LILGNVTVGSGCFVGAHCCLGLNVAMADGARLGDMSHLPDGAVIAAGQAMRGSPAEPG
                     EVDLEHFEGRGGERRGSAFLFGLIHLGLIYAMGYLLILSMLPAVALIGSGLYFAGPGL
                     AAAAAFVAAPISTVWYLVLVLAVKWLVIGRIVPGIYRLHSADYLRYWFLNYLLNNTRH
                     MALALYATLFFPKFLRLLGAKIGRSVEISTAMHIVPDLLEIGEGSFLADACVVGGHKT
                     YLGQIELCTNKIGKRSFIGNSALVPGGTEVGDDNLIGVMSTPPAGVTRTADGTRWLGS
                     PGFALPNTQHVSCFGAKRTFAPGYGLMFARGALETVRVFLPGIVTAANFVVFCMAITI
                     AYQHAPLWAVAVSAPAVALVLSVLSILAVALIKVVLIDRFVPTVKPLWCSFVWLNEVV
                     NGLYESIAAIAMAPLMGTPFISPCLRMMGCKIGKWVFLETTLFSEFDLVEIGDYASLN
                     LGSTIQTHLFEDRVMKADHLKIGECCTVGNMAVVLYGTEMKRGSSLGALSVLMKGEVV
                     PESSRWIGIPTRPVEQASKAACKTASLPPTAPASDRSARWRAVRPAARRHYNHKRDGY
                     PQSRKLRASLIYSASITAAFCFGFVGVSYLLPMGSAVSIAALQAEKSPDPEWVLLQPS
                     GSITGQAGGSGH"
     gene            4756..6213
                     /gene="bcsS"
                     /locus_tag="VLJ17_06165"
     CDS             4756..6213
                     /gene="bcsS"
                     /locus_tag="VLJ17_06165"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsS"
                     /protein_id="HSV22598.1"
                     /translation="MWRSTGLPLAAVVGLAASASAVAADLPVFVKAQPVVSAAPWTGF
                     YAGAHFGYGWGDKTFIDNFPTPDGELDAAATVRGWLGGLQGGYNHQFNWLVVGVEGDF
                     TWSGVTNSFSCFPFGDQVCSAKPEWLGSVAGRLGVAQGPALFYVKGGAAWAHDRFTDV
                     ATCSGHQPTSRAGITAACGDMFIGNQTRPGWLFAVGIEYLFAPNWSAKLEYDHMDFGS
                     QSVPFIDGGNGFFTEEIHQRVDVVKLGLNYHFNWGAAAVPVGGAGYVKAAPKDDDDAG
                     RVLAFSAFDVSKYSYSGLVGTLIAPFKDLDTSGLRFWLFGEGGVYKYPAGGEFIRGTF
                     ESGDVLAGYAFEGDFYSVNLLAGFNASNHVLSNVDPENKVQGTAFGAKVRADAWVNPT
                     PKTLTYGEAEYSTAFRTYFAKTKFGYDFTDGKEIFFGPEFAALGDERFNQWRVGAHLT
                     QMKFGKVQVDVSAGYANDSVVGTGAYGTVEVSTHF"
     gene            complement(6301..6519)
                     /locus_tag="VLJ17_06170"
     CDS             complement(6301..6519)
                     /locus_tag="VLJ17_06170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22599.1"
                     /translation="MQSTVAHRCPVCAVNMRLSGAFAITFAGGRTDYALKYTCSTCHV
                     EMNRTEKTPLHHCLENSCHGGYVGDRAA"
     gene            complement(6726..7016)
                     /locus_tag="VLJ17_06175"
     CDS             complement(6726..7016)
                     /locus_tag="VLJ17_06175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22600.1"
                     /translation="MWWLLFRHGGVVLIKASSLVHARLLAVQGGLGRASDFIEGHFID
                     PGRMMPIAYDYVGRMLSPIEARQLEELVNHEPQDHGTVRGRAPAPPSSRRQR"
     gene            7191..>7800
                     /locus_tag="VLJ17_06180"
     CDS             7191..>7800
                     /locus_tag="VLJ17_06180"
                     /inference="COORDINATES: protein motif:HMM:NF012307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase domain-containing protein"
                     /protein_id="HSV22601.1"
                     /translation="MVLEAVYEQDFLSCSYGFRPGRSAHQALNQLSGAMAVSKQHWVL
                     DVDVRKYFDSISHSHLREILDQRVTDGVIRRMIGKWLNAGVLEAGNLHLATEGTPQGG
                     VISPVLSNIFLHHVLDKWFEDVVRPRMRGKATLVRFADDFVMTFETYQDAKRVMEVLG
                     KRLDRFGLTLHPDKTHFIDFRPQRHGGTPPDCKVQSFDFLGFT"
BASE COUNT         1516 a         2198 c         2372 g         1714 t
ORIGIN      
        1 atctgcaatt ggatcgcctt tcggatcaga ttgctatgtt gctgcatcgt cgaggcatcg
       61 gtcctggctc cctggttgcg ctctattccg aaaagtcgct acgcctgttt gccgccatgc
      121 tgggtgtgct caaagccggc gccggttatg ttccgatcga cccgagattt ccgattgctc
      181 gagtccagag cattgtggct gacgccgagg tgaggatcgt tttcagcgac ggcgccttgg
      241 cgcgccacct cgcgccgcac gtatcggctg aagtgctgtg cctcgaagag gagctggagc
      301 gcaacatcga gatagcgcct ccgttggcgc cggttgcgat ctcccccgag gacgcgtgct
      361 acgtgattta tacgtccggc tccaccggcc aacccaaagg cgttgtcatc gaacaccgca
      421 acgccgtcaa tttcgtccga tcgctacgat cgctgtacgg gctcaccgaa aaggatcggg
      481 tctatcaggg attttccatc gcattcgatg cgtcagtgga agagatatgg ggtgcgctct
      541 cggtcggtgg aacgctcgtc gttccaaacg gtgagacctc gcgctccgcc ttcgatgctg
      601 ccgaattcat caacgccaac aagatcactt tcttttcaac ggttccgtcc ttccttgccg
      661 tgctcccggc cgaactgccg acggtgaagt tgctggtgct cgggggtgag gcctgccccc
      721 ccgaactcgt tacgcgctgg gcaacgccgg gacgacggat gctcaatacc tacggtccga
      781 ctgaggcaac agttgtcgcg acggcgtcag aatgtattgc cggcgcgccg gtcatgatcg
      841 gcaacccgct tcccggatac gagaccttcg ttcttgacga gcggttacgg ccggtcaacc
      901 ccggggaatg cggcgaattg tatatcggcg gcgaaagcgt cgcgcgaggc tatctgaacc
      961 gtccggaact gacggccgag cggttcattt ccaacccgtt tgcggcagat aggctcttat
     1021 cggatcgcct ttatcgcaca ttcgatctcg ttcgccgtca cgatggtggc ggactgcaat
     1081 tcatcgggcg cgcagatggg cagatcaaga tccgcggatt tcgcatcgag ctttcggaga
     1141 tcgaagcggt tctgatggag catccggctg tccgggcggc ggccgtcaag ctcgtcgaat
     1201 tcgggccgca aagggagctt gccgcgtatg tcgtgctcga atcgcacgtt gaaggtctgg
     1261 accgtgagag cgtcgttgcg ctcctgcgaa atcgcgttcc cgactacatg gttccgcggt
     1321 atctcgacat aatccaggag cttcctgcgc tgacgagcgg gaaggtagat cgagatcgtt
     1381 tgcctgcgcc ctgcagcatt ctgggaagca acaatcgcaa catcgttccc gccgcaaccg
     1441 cactcgaaca gaccgtggta gaaacgctgg aaaaggaatt tcaagtgtct cccatctctg
     1501 tcgaggcaga tttctttctc gatctccacg gccattcgct caatgccgcg cgcgtcgtaa
     1561 ccgcgctgcg gacaaggctt gatacggtcc aggtctcagt ccgcgacctt tataccaatc
     1621 gcacagcgag gcttttggcc cggcatcttg acaatctcgg cgtcggttcg gagcgcccgg
     1681 cgatcacgcc gcgcgcggtc ccgcatcctc aagcagcctc ggactcgcaa ccccggtcga
     1741 cctggtttcg gtatccctgt gcaatccttc agctgctggg cctgctcgcg ttctatgggt
     1801 gcgtttctgc gccgctggcg ttgaccgtcg tgcttgtgat cgaggtctgc aacggcgggg
     1861 tggaactcgg gacggccctg gaccttgcca cgacagcgag cttcttagtc tggccgtcat
     1921 ggcttggctt aagcattgca ctgaaatgga ttgtcatcgg gcgctacaag cccggccgat
     1981 atcgcgtttg gggcgcctac tatttccgat ggtggctggt caaccgcttc caaagcctaa
     2041 gctggtcgca gatgttcgtt ggtaccccgc tgatgagcct ctactaccgt gccatgggcg
     2101 cgaaaatcgg caagaactgc actatcggaa cgccgatttg caccgcgttc gacctgatct
     2161 cgatcgggga cggcagcagc atcggattgg acacccacat cttgggctat cggatcgagg
     2221 acggctggct catcctcggc aatgtgacgg tcggatcggg gtgctttgtc ggagcgcatt
     2281 gctgcctcgg cctcaacgtc gcaatggctg acggggcgcg tctaggcgac atgtcgcatc
     2341 tcccggacgg tgccgtgata gcggccggcc aagccatgcg gggctccccg gccgaacctg
     2401 gagaggtcga ccttgagcat ttcgagggac ggggtggcga gcggcgtggc agcgctttcc
     2461 tgtttgggct cattcatctc ggcctcatct acgcgatggg ctacctgctg atcttgagca
     2521 tgctgcccgc agtggcgctc atcggttcgg gcctttactt cgcaggccct ggcctcgctg
     2581 ccgccgcggc gtttgtcgca gcgcccattt caaccgtctg gtatttggtt ttagtgctcg
     2641 ccgtgaagtg gctggtaatc ggccgcattg tgccgggcat ttaccggtta cacagcgcgg
     2701 actatctgcg gtactggttc ttgaactacc tcttgaacaa tacccgccac atggcgctag
     2761 cgctttatgc aacgctgttt tttccgaaat ttctgaggtt gttgggggct aaaatcggac
     2821 gtagcgttga aatttcgacc gccatgcaca tcgtgcccga cctgttggag atcggcgagg
     2881 ggagctttct ggctgacgcg tgcgtcgtcg gcggccacaa gacgtatctg gggcagatcg
     2941 aactctgtac caacaagatc ggaaaacgca gcttcatcgg caacagcgcg ctggttccgg
     3001 gtgggaccga ggtaggtgac gacaacctca ttggggtcat gtcgacgcct ccggcgggcg
     3061 taacgcgcac ggcggacggc acacgctggc ttggctctcc ggggttcgca ctaccgaata
     3121 cgcagcatgt cagttgcttc ggcgccaagc ggacattcgc acccggctac ggcctgatgt
     3181 tcgctcgcgg cgcgctggag accgtaaggg tgtttctgcc cggaattgtc accgccgcca
     3241 attttgtcgt gttttgcatg gcgatcacga tcgcttatca acatgcgccg ctgtgggcgg
     3301 ttgcggtgtc ggcacctgcc gtggctctcg tattgtcggt tttgtcgatt ttagcggtcg
     3361 cgctgatcaa ggtcgtgctt atcgatagat ttgtaccgac ggtaaagccg ctctggtgca
     3421 gcttcgtctg gctcaacgaa gtggtcaacg gcctgtacga atccattgca gccatcgcaa
     3481 tggcgccgct gatgggcacg ccattcatct cgccatgctt gaggatgatg ggatgcaaga
     3541 taggcaagtg ggttttcctt gagacgacac tgttctccga atttgacctt gtagagatcg
     3601 gcgattacgc atctctcaat cttggatcca cgatccagac ccatttgttc gaagaccgcg
     3661 tgatgaaggc cgatcatttg aagatcggtg aatgctgcac tgtcggcaat atggctgtgg
     3721 tcctttacgg caccgaaatg aaacgcggct cctcgcttgg cgcgctttcg gtcctgatga
     3781 agggtgaagt cgtgccggag tccagccgct ggatcggcat tccgacgagg ccggtcgagc
     3841 aggcgtccaa ggcggcatgc aagacggcgt cgcttccacc gaccgctcca gcgagcgacc
     3901 gatcggcgcg gtggcgggcg gtccgccccg cggcgcgacg gcattacaat cacaagcgcg
     3961 acggctatcc gcagtcgcgg aaactgcgcg ccagtttgat ctattccgca agcatcacgg
     4021 cggcgttttg cttcggcttc gtcggtgtca gttacctttt gccgatggga tcagcggttt
     4081 cgattgcggc cttgcaggca gaaaaaagtc ctgatcccga atgggttctg cttcaaccat
     4141 cgggctcgat cacgggccag gcggggggct caggacattg agcggtatca gcaaaattca
     4201 tcgttgctag cgcccgaagc gcaccaaacg gcgaaatcgg cgtatcgaga catcccccca
     4261 gagccgttct gagatgagct atcgcaatcc gcgccaccgg ccacgcaatc tggtcaacag
     4321 actttccctg ccgggccggt ggatgaggtg gtcggaacgg cgaaagcgaa ggtggaacag
     4381 accgaaaaaa tactgccgtc caggccagta gatatgcgcc aagttcgagt atggccttac
     4441 cgggatgatt cccgggccga ttcacggccg ttcaccatgc aggttgagca tcaggagacc
     4501 agcgggcagg tggccgtcga atcgccgctc aacggggtcg gagagacaag acgcgacatc
     4561 atccgtccgc acggcggttc acgataagcc caagcgacat ctggccgtcg acgtgattgc
     4621 cggtgccaac gaaaaattaa ttcgatgtgt ctaaatagat acaattgcag ataaatttgt
     4681 atccagtcct tagttttcac tatgtttgat tacccaaacg tgagatgttt caataccttg
     4741 gagagggggc tttggatgtg gcgctcaacc ggtctgccgc tggcggctgt cgtaggcttg
     4801 gcggcgagtg catctgccgt ggcggcggac ctgcctgtct ttgtgaaggc gcagcctgtt
     4861 gtgtcggctg cgccatggac cggattctat gcgggggcgc atttcggcta cggctggggc
     4921 gacaaaactt tcattgataa cttcccgaca cccgacggcg agctcgacgc ggccgccacg
     4981 gtcagagggt ggcttggcgg actccagggt ggctacaacc accagttcaa ttggctggtc
     5041 gtcggcgtgg agggcgattt cacctggagc ggagtgacta atagtttttc atgtttcccg
     5101 ttcggcgatc aggtgtgttc cgccaagccc gaatggctgg gttcggtggc aggccgtctc
     5161 ggcgtcgcgc agggacccgc actcttttac gtcaaaggcg gcgcggcctg ggcccacgat
     5221 cgtttcacag atgtggcgac ctgctccggc catcagccga caagccgggc tggaataacc
     5281 gcggcgtgcg gcgatatgtt catcggcaat cagacgcgac cgggctggct gttcgcggtc
     5341 ggaattgagt acctctttgc gccgaactgg tcggcaaagc ttgagtacga tcacatggat
     5401 ttcggcagcc agtcggtgcc gttcatcgac ggcggcaatg ggtttttcac cgaggagatc
     5461 catcaaagag tggacgtggt caagctcggc ctgaactatc atttcaattg gggggcagcc
     5521 gctgtgccgg tgggcggagc cggctacgtt aaggccgcgc ccaaggacga cgacgatgca
     5581 ggccgggtct tggcattttc cgcatttgac gtctccaaat acagttatag cgggcttgtt
     5641 gggacgttga tcgctccatt taaagacctc gatacctcgg ggctacggtt ttggctgttc
     5701 ggcgagggag gcgtgtacaa atatccagca ggaggcgaat tcatcagggg cacatttgaa
     5761 agcggggacg tgttggccgg ctacgctttt gagggggatt tctattcggt caatctgctg
     5821 gccggcttta atgccagcaa tcatgtgttg tcgaacgtcg accctgagaa caaagtacag
     5881 ggcaccgctt tcggtgcgaa ggttcgtgcg gacgcatggg tgaatccgac tcccaagacc
     5941 ctgacctatg gggaagcgga atattccacc gcgtttcgca cgtatttcgc caagacgaaa
     6001 ttcggctatg acttcaccga tggtaaggaa attttctttg gccccgagtt tgcggccctc
     6061 ggtgacgagc ggttcaatca gtggcgcgtt ggagcgcacc tgactcaaat gaaattcggc
     6121 aaggtacaag tcgacgtttc agccggatac gcgaacgaca gcgtcgtcgg caccggcgcg
     6181 tatggaacgg tcgaggtgag cacgcacttt tagaatcgtt atgttgattt gactgtcaac
     6241 gccccgcgca agccggaatg gcaaaagaag tagctgtatc aactttcgag cacgtgttgt
     6301 tcaggcggcg cgatcgccga catatccgcc gtggcagcta ttttccaggc agtggtggag
     6361 tggcgttttc tccgtccggt tcatttcgac atgacaggtg ctgcacgtat atttcaaggc
     6421 gtagtcagtc ctgccacccg caaaggtgat cgcaaatgcg ccgctcagcc gcatgttcac
     6481 ggcgcaaacg gggcaacgat gcgctaccgt cgattgcata gaatgttgct cctgttggca
     6541 aatcagtgtc ttaattaaga taattcgcct cagaaatcgc aaaattcctc aaacagcggc
     6601 ctaaatcaag acgagacttt gcgcagtcga agtaataatg aatcacgtta gacctatgcg
     6661 ttggcgccga atgtgcggcg ttactttgcc gcgtcgcggc agcagattca ttcgacagcg
     6721 aactttcaac gttgacgacg agacgatggc ggtgccggcg ctcgaccgcg cacagtgccg
     6781 tgatcctgcg gctcgtgatt cacgagttcc tccagttgcc gcgcctcgat gggtgagagc
     6841 atccgaccga cgtagtcata cgcaatcggc atcatgcgtc cagggtcgat aaaatggcct
     6901 tcgatgaaat ccgaggcgcg gccgagccca ccctgcacag cgaggagtcg cgcatggacc
     6961 agcgaggagg ctttgatcaa gacgacaccg ccgtgacgga acaagagcca ccacattgtc
     7021 attcctgcgc aaggtcaggt ccccactcga tgtataacga tttttttgtg ggcgcgacag
     7081 ggattgagcg ccggtgtgcc tcttccggcg ggaggggaaa actgcgcagg aattttattt
     7141 cgtacgagtt tggtatatat tcctatcgtc ggaaacagag agcgatcgcg atggtcctgg
     7201 aggccgtcta tgagcaggac tttctgtcat gctcatacgg cttcaggcca gggcgatcgg
     7261 cgcaccaggc actgaaccaa ctgtcaggcg ccatggcggt gagtaaacag cactgggtgc
     7321 tcgacgtcga cgtacgcaag tacttcgact ctatctcaca ctcacacctg cgcgaaatcc
     7381 ttgaccagcg agtcacggat ggtgtcatcc ggcgaatgat cggcaagtgg ctgaatgcag
     7441 gggtcctgga agcaggaaac ctgcacctcg cgactgaagg aaccccgcaa ggcggtgtca
     7501 tctcaccagt gctctcgaac attttcctgc accatgtgct ggacaaatgg ttcgaggacg
     7561 tggtgcggcc acgcatgagg gggaaggcga ccttggtaag attcgccgac gacttcgtga
     7621 tgacctttga gacctatcaa gacgccaagc gggttatgga ggtgttgggg aaacggcttg
     7681 accggttcgg ccttacgctg cacccggaca agacgcactt catcgacttc cgcccgcagc
     7741 gtcatggcgg gacgccgcca gactgcaagg tccaatcgtt cgacttcctc ggcttcaccc
//
LOCUS       DATILV010000269         2357 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1596946, whole genome shotgun sequence.
ACCESSION   DATILV010000269 DATILV010000000
VERSION     DATILV010000269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2357)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2357)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2357
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1596946"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            327..776
                     /locus_tag="VLJ17_06185"
     CDS             327..776
                     /locus_tag="VLJ17_06185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007812993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HSV22602.1"
                     /translation="MSKENENKAVVGRWFTEFWGKNVNLGVVDEIAAPDMLLKYSLHD
                     PRRGRDDIKAFMTDFRAAFPDLNFWGISDLIAEGDYVVGQWEGGGTHTGPAFNDFLIG
                     GLPAATGRKMHFSGTTVLKVINGKIVEEIGLDDGVTALTQLGLIKAA"
     gene            1096..2217
                     /gene="ada"
                     /locus_tag="VLJ17_06190"
     CDS             1096..2217
                     /gene="ada"
                     /locus_tag="VLJ17_06190"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015316995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-binding transcriptional
                     regulator/O6-methylguanine-DNA methyltransferase Ada"
                     /protein_id="HSV22603.1"
                     /translation="MTTATSNETPNLPSPSVIDDPRWARIVARDKTADGQFWYSVSTT
                     GVYCRPSCPSRIANPKNVQLHDSLESAKSTGFRPCLRCKPNGASLEAENAALVAKACR
                     IIEESEEELSLEELANAFGRSPSYFHRIFKTTTGLTPKNYAAGHRAKKVRQGLACRNT
                     VTEAIYDAGFSSSGRFYEKSADMLGMTPSRYRAGGANEEIRFAVGQTSLGAILVASSK
                     KGVAAILLGDDPDELVRNLQDRFPKAHLIGADRDYEGLIARVVGLVETPGTGPNLPLD
                     VRGTAFQHRVWRALLQVPAGETVSYAEVARRIGSPKAVRAVASACAANNLAVAIPCHR
                     VVRTDGSLSGYAWGVARKRVLLDREMSRRTSDSKASTGV"
BASE COUNT          518 a          677 c          677 g          485 t
ORIGIN      
        1 gagacagttt catgatgcac accttgtgga atttccgatt acttctggtt agcccgtcaa
       61 tcaggagtaa tcgcgatcac ttcctacaag ccgacttccc attaccaatc cgcccaagct
      121 tcccagaacc ccgtttctgg atagtttccg gattgccaac aatctggaaa aaacgggccg
      181 tgcgttggcg cggcggcatt ctctggggtt tcgattccaa agcaagaatc ggagttcgac
      241 gtaatctccg aaaacgtaat ctttacctaa ggtcatcgac acctgtcgat gatcctcaag
      301 agaaaaagtc acgaggagcc actccaatga gcaaggaaaa tgaaaacaag gccgttgtcg
      361 gccgctggtt taccgaattc tggggcaaga acgtcaatct tggcgtagtc gacgagatcg
      421 ccgcaccgga catgctactg aaatattcgt tgcatgaccc ccgccgcggc cgggacgaca
      481 tcaaggcgtt tatgaccgat ttccgtgccg cattccccga tctaaatttc tggggcatct
      541 cggatctgat cgccgaaggt gactacgtcg tcggtcaatg ggagggaggt ggtacccaca
      601 cgggtccggc gttcaatgat tttctgatcg gcggcctgcc agccgcgacc ggtcgcaaaa
      661 tgcacttcag cggcaccaca gtactgaagg tgatcaatgg caaaatcgtc gaggaaatcg
      721 gcctcgacga cggcgtgacc gcgctgaccc aactcgggct gatcaaagca gcctgatcga
      781 agcagccgcc accggccgcc ccaagagggg cggctaccct tacgtcgcag tggccggcag
      841 agaaggaatt caccatattg tggcggcggc gttcggttgg tttgtacacc cgctcttcgc
      901 ggtttggatc ttcttattcg ttgtcggcta ctatgcctgg accagccaag gtatccgttc
      961 gggccgatga agtgcgctgc acgtccggcg ccgttcggcc gggtggcgcg tcatcgaatt
     1021 tgaaagcaag gatcggagtg cgcccggcga agattagcgg caccatggag ccagtactac
     1081 atggagagat gacagatgac gactgcaacc tccaacgaga ctccgaacct cccgtcccca
     1141 tcggtaatag atgaccctcg atgggcgcgg attgtcgcac gcgacaagac agctgacgga
     1201 caattttggt actcggtttc aacgacgggc gtttactgcc gaccgtcgtg cccctcgcga
     1261 atagccaacc ctaagaacgt tcagctccac gacagcctcg aaagcgcaaa gtctacgggt
     1321 ttccgccctt gcttgcggtg caagccgaac ggagcttcgc tcgaagccga gaacgcggcc
     1381 ctggtagcga aggcatgccg gatcatcgag gagagcgaag aagagctctc acttgaggaa
     1441 ttggcaaacg cgttcggtcg cagcccgagc tattttcatc gcatattcaa gacgaccact
     1501 gggcttacac cgaaaaacta tgccgccggc caccgcgcga agaaggtccg tcaaggactg
     1561 gcctgccgca atacggtcac agaggcaatt tacgacgcag gttttagttc cagcggacgc
     1621 ttctatgaga agtctgcaga catgctgggt atgacgccat cacggtatcg cgcgggcggc
     1681 gccaacgagg agattcggtt cgctgttggt cagacttctc ttggagccat tctcgtcgcc
     1741 tcaagcaaga agggcgtcgc ggcgatcctg ctcggggacg atcctgacga actggtccgc
     1801 aatcttcagg accgcttccc gaaagcgcat ctcattggcg cagatcgcga ctatgagggt
     1861 ttgatcgcaa gggttgtcgg cttggttgag acgccgggaa ccggcccaaa tcttcctctc
     1921 gacgtgcgcg gcacggcctt ccagcaccgt gtatggcggg cgctcctgca ggtccctgct
     1981 ggcgagacgg tttcctatgc cgaggtcgcc cggcgcatcg gatcgccgaa ggcggtgcgc
     2041 gccgtcgcga gcgcctgcgc ggcgaacaat ctcgctgtcg ctattccctg ccatcgcgtg
     2101 gtccgcacgg acggttcgct ctcgggatat gcctggggcg tcgcgcgcaa gcgtgttctg
     2161 ctcgaccggg agatgtcgcg aagaacttcc gattcgaaag caagcaccgg agtttaatcg
     2221 agtaagccac cggatatttt cgtcatgagg agaaatcgat gaacctcatg atttccgaaa
     2281 ctacttcgca atatgaactc gaaagaacgc gtgccaatgc ttcggtcgat accatctgct
     2341 atttgtcgtg cgaatct
//
LOCUS       DATILV010000270         8407 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4151032, whole genome shotgun sequence.
ACCESSION   DATILV010000270 DATILV010000000
VERSION     DATILV010000270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8407)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8407)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8407
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4151032"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2789)
                     /locus_tag="VLJ17_06195"
     CDS             complement(<1..2789)
                     /locus_tag="VLJ17_06195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HSV22604.1"
                     /translation="MQVGDFSVRMASDQDGVPGKIADTFNEIAAANQRIAQQLERVGE
                     EVGRKGKTRQRVKFGLSHGAWGEMEDSVNSLVDDLLWPTMAVTRAVAAVTKGDLLQTV
                     ALDIDGRPLEGASLQAATVVNTMIKQLNVFTSEVTRVAREVGAEGKLGGQAQVSEVTG
                     VWKDLTESVNSMASNLTAQVRNIADVTIAVANGDLSKKITVDVRGEILQLKEAINTMV
                     DQLRSFASEVTRVAREVGTEGKLGGQASVPGVAGTWKDLTDSVNAMCGNLTGQVRNIA
                     QVTTAVARGDLSRKITVDVHGEILELKDTINTMVDQLNAFASEVTRVAREVGTEGKLG
                     GQAQVSGVAGTWKDLTDNVNFMASNLTAQVRNIAEVATAIAGGDLSKKITVNASGEIL
                     QLKETINTMVDQLNVFAGEVTRVAREVGTEGRLGGQANVLGVAGTWKDLTDSVNSMAG
                     NLTSQVRNIAEVTTAVARGDLSRKIAMDVKGEIQELKNTINTMVDQLNAFASEVTRVA
                     REVGTEGKLGGQAQVPGVAGTWKDLTDNVNFMASNLTAQVRNIAEVATAIASGDLSKK
                     ITVDVRGEILLLKETLNTMVEQLRSLAAEVTRVAREVGTDGRLGGQAVVPGVAGTWKD
                     LTDNVNLLAANLTTQVRNIAEVTTAVAGGDLSRKITVDVKGEILELKNTINTMVDQLN
                     AFASEVTRVAREVGTEGKLGGQAQVSGVAGTWKDLTDTVNVMAANLTEQVRGIVKVVT
                     AVANGDLKQNLTFKSKGEVAALAETINNMTDTLATFADQVTTVAREVGVEGRLGGQAN
                     VPGAAGTWKDLTGNVNLLAANLTTQVRAIAEVATAVTKGDLTRSIQVQARGEVADLKD
                     NINTMIDNLRLTTDHNTEQDWLKTNLAKFTTMLQGRRDLTTVGRLLLSELAPLVNAQL
                     GAIYQMETEDGPSYL"
     gene            3466..3924
                     /locus_tag="VLJ17_06200"
     CDS             3466..3924
                     /locus_tag="VLJ17_06200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BA14K family protein"
                     /protein_id="HSV22605.1"
                     /translation="MRSKILTGSAVAVTAAAVLVTAGSASAQRWHDHRNFDGSLAGVA
                     AGVVGGAVAAATSPLWAPGYYYNGYPDYSYAPDYAYAPDYAYAPGYASAPSYSYAPSY
                     SYAPGYSYAPGYAYAPGYGRDDAYCAQRYRSYDPASGTYLGYDGIRHSCP"
     gene            complement(4234..5088)
                     /locus_tag="VLJ17_06205"
     CDS             complement(4234..5088)
                     /locus_tag="VLJ17_06205"
                     /inference="COORDINATES: protein motif:HMM:NF018527.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1236 domain-containing protein"
                     /protein_id="HSV22606.1"
                     /translation="MKRTKLLMTSAAIALIAAMGVAVAQQQPPSTAPAEKMPPSSSNK
                     QPSTAPHQNEGAAPGARGEGSKGHRETTGQASQDRTNRASEQNKAEQDRGNKEQNRAT
                     AQAPKEQNKSEDRAKAEQDRGNKEQNRAAQAPKEQNKSEDRAKTERTEQNRTTTGQAP
                     REDRTNRASEQNKSEQDRAKIEGNRTTGQGSAATSNNVTVNITPEKRTQIHEVIVKER
                     SAPRVASANFDVSVGTRVPGTVKFAALPASILAIEPAWRGFEYFLVGERIVIVEPKTL
                     EIVAIIDA"
     gene            complement(5403..7628)
                     /locus_tag="VLJ17_06210"
     CDS             complement(5403..7628)
                     /locus_tag="VLJ17_06210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amylo-alpha-1,6-glucosidase"
                     /protein_id="HSV22607.1"
                     /translation="MPWSFKDTTTMPITNSAGVTTAEINPIHEARFHIQATGTAAKPR
                     RTLKYGDTFIVVDSHGDIGASAGGPDGLFHNDTRFLSQLELLVCGHQPLLLGSNTRDD
                     NALLTIDLTNPEIHFDGNVVLQQDTLHIVRTIFLYRNEAHQRLVVRNHGDVPVVLQLA
                     VNFDNDFADLFEVRGAQRRRRGVAAGGVVSPAQAALIYQGLDGKGRRTDLTFDPPPAE
                     LSAKTAVYRMQLKRGEYAPLFITARCDDATGRPPMPFLQRLKAIHRERRDGDRCVTTV
                     VTSNDIFNEVVCRSMADLHMLITETPQGPYPYAGIPWYSTTFGRDGLITALQMLWFDP
                     SVARGVLRRLAFYQAKIDDPDADAQPGKILHEMRGGEMAGLKEVPFGLYYGSVDATPL
                     FVLLAGLYAERTGDDLTLSELWPAIEVALRWIDGPGDPDRDGFVEYRRATELGLANQG
                     WKDSYDAVFHSDGRLAEGNIALAEVQGYVYAAKQVAARCARRIGRIDKARHLDEQANR
                     LAEDFDAAFWCPELDTYALALDGTKKPCRVRTSNAGQLLFTGITRPESAAKVATGLLQ
                     PRFFSGWGIRTVAKGEARYNPMSYHNGSIWPHDNALIALGLGRYGLKDLVGQVFKGLF
                     DASTYMDLRRLPELFCGFQRQRSRGPTLYPVACAPQAWASATPFTLLEASLGLEFDPH
                     NNEIRLRNPQLPMFLEEVVLRNLQLGKSNIDLKIRRRGSSVSLDIARRSGRAQVSVVL
                     S"
     gene            complement(8212..>8407)
                     /locus_tag="VLJ17_06215"
     CDS             complement(8212..>8407)
                     /locus_tag="VLJ17_06215"
                     /inference="COORDINATES: protein motif:HMM:NF018513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HSV22608.1"
                     /translation="CMQLGLLLPPHGLLLMTMRGVAPPQVSMADIFRAVIPYIVLSLV
                     LLVMIIAFPNIATWLPALLG"
BASE COUNT         1602 a         2513 c         2384 g         1908 t
ORIGIN      
        1 ttgagatagg agggaccatc ctcggtttcc atttggtaaa tggctcccag ttgcgcattt
       61 accaaaggcg ccagctcgga gaggagcagg cggccaaccg tcgtgagatc gcggcgcccc
      121 tgcagcatgg tggtgaactt cgcaaggtta gtcttgagcc agtcctgttc ggtattgtga
      181 tctgtcgtaa gccgcagatt gtcgatcatt gtattgatat tgtctttgag atccgcgact
      241 tcaccgcgag cctggacctg gattgaccga gtcaggtcgc ccttggtcac agcggttgcg
      301 acttccgcga tagcccgcac ctgggtcgtc aaattggccg ccaggagatt gacgttgccg
      361 gtgaggtctt tccaggtgcc tgctgcgccg ggcacgttgg cctggccacc gagccttccc
      421 tcgaccccga cttcgcgcgc gaccgtcgtt acctgatctg cgaatgtcgc aagcgtatcg
      481 gtcatgttgt tgatggtctc cgcgagggcc gccacctcgc ccttcgactt gaaggtaagg
      541 ttctgtttga gatcaccgtt cgcgactgca gtgacaacct tgacgatccc gcgcacctgc
      601 tcggtcaggt tcgccgccat gacgttgacg gtatcggtca ggtccttcca ggtgccagcg
      661 acgccggaca cctgcgcctg tccgccgagc ttgccctcag tgcccacctc gcgggcgacg
      721 cgcgtcacct ctgacgcgaa cgcgttgagc tggtccacca tggtgttgat ggtgttcttg
      781 agctcgagaa tctcaccttt gacatccacg gtgattttgc gcgacaggtc gccgcccgcc
      841 acggcggtcg tgacctccgc gatatttcgg acctgggtcg taagattggc agcaagcagg
      901 ttgacgttgt cggtgaggtc cttccaggta ccggcgacac ccggcaccac cgcttggccg
      961 cccaggcggc cgtcggtacc aacctcacgg gctacgcggg tcacttctgc cgcgagcgag
     1021 cgcaactgct ccaccattgt attcagggtt tccttcagca gaagtatctc gccccgcaca
     1081 tccaccgtga tttttttcga caggtcaccg ctcgcgatcg cggtcgcgac ttcggcgatg
     1141 ttgcgaacct gtgccgtgag attgctcgcc atgaaattga cgttgtcagt taagtctttc
     1201 caggtgccgg ccacgcccgg cacctgggcc tggcccccca atttcccctc ggttccaact
     1261 tcacgagcga cgcgcgtcac ttccgacgcg aaggcgttga gttgatccac catcgtgttg
     1321 atggtgttct tgagctcctg gatctcgccc tttacatcca ttgcgatctt gcgcgataga
     1381 tcgccgcgcg ccaccgcggt tgtcacctcg gcgatgttgc ggacttggga cgtcaaattg
     1441 cccgccatag aattgacgct gtcggtcaaa tccttccaag tgccggcaac gcccagcacg
     1501 ttggcctggc caccgagccg gccttcggtg ccaacctcgc gtgcaacgcg agtcacttca
     1561 ccggcgaata cgttgagctg atcaaccatt gtattgatgg tctctttcag ctgcagaatt
     1621 tcgccgctgg cgtttacggt aatctttttg gagagatctc cgcccgcaat ggccgtcgcc
     1681 acttcagcga tgttacggac ttgcgcggtg agattactcg ccatgaagtt aacgttgtcg
     1741 gtcaggtctt tccaggtgcc ggccacgccc gacacctggg cctggccgcc gagtttgcct
     1801 tcggtgccga cttcgcgggc gacgcgtgtc acctccgacg cgaaggcgtt gagttggtcc
     1861 accatcgtat tgatggtgtc cttgagttcg agaatctcgc cgtgtacgtc cacggtgatc
     1921 tttctggaca ggtcgccgcg tgccactgcg gttgtaactt gcgcgatgtt acgcacctga
     1981 ccggtcaagt tgccgcacat ggcattgacc gaatcggtga gatccttcca agtcccagct
     2041 acgcccggca cgctcgcctg gccgccgagc ttgccttcgg tgccaacttc ccgggcgaca
     2101 cgggtcacct ccgaggcaaa cgaacgtagc tggtccacca tggtgttgat ggcttcctta
     2161 agttgcagaa tttcgccgcg tacatcgacc gtgatctttt tcgacaaatc tccgtttgca
     2221 accgcgattg tgacgtcggc gatgttgcga acttgggcgg tcaggttgct tgccatagag
     2281 ttcacgctct cggtcaaatc cttccacacc ccggtgacct cgctcacctg agcctggccg
     2341 ccaagctttc cctcggctcc gacttcgcgt gcgacgcggg tcacctccga ggtgaagaca
     2401 ttgagctgct tgatcattgt gttgacgaca gtggcggcct gcaaggacgc gccttcaagt
     2461 ggccggccgt cgatatcgag agcaacagtc tgcaaaagat cgcccttagt cacggccgct
     2521 acggcgcgtg tgacggccat ggtgggccac aatagatcgt cgacgaggga attgacggaa
     2581 tcctccatct cgccccaggc tccgtgcgaa agaccaaatt tgacgcgctg ccgcgtcttg
     2641 ccctttcgcc cgacctcctc gcccacgcgt tcaagttgct gcgcaattct ctgattcgcc
     2701 gcagcaatct cattgaaagt gtctgcgatc tttcccggta cgccgtcctg atcgctggcc
     2761 atacggaccg agaaatcgcc tacctgcatg gattgcaggg cgtgtagcaa atggtgctcg
     2821 aatgaggggt ggccgtcgcg gttcttggca gaatcgttct cagaacttcc atcgcgagga
     2881 gggattgggc acggaccatt cgctctggat tcaacgggtt ttggttcgtt ctgctcattc
     2941 tgctcgccaa ctggttgcat ctatgccctc caacaacccg atatgctttt tgccgaaagt
     3001 cgcacgccgg ccaattctcc tggcggggcg ttctctcgct ttgcatctta tgcggggcaa
     3061 caggagcgct gagttgaatc cgtagatttt acatcggctt gcagaactgg tttcccgcgc
     3121 aaaacgacaa cgcgccagat gctacacggt tccgccgcat acgaaaactt gcctcggcgc
     3181 cattccgatt gcgaggccat cttgttctgc aggaggtccc cttcaaccag ccacctacgg
     3241 gattgaaaac aacggcagtt ttcgattctt gcctgccgat ctgaagtggg gcgggggtca
     3301 gagcagacaa attccaatta tgcatggctt taatgggaat gggatgggtg ggatccaaat
     3361 cggcggttcc cggaacaaga ccttgtcggg gggattttat ccatggcggc ccgggttctg
     3421 accggtcgca agttccaccc tcttgaacga cacggagtta atttcatgag atcaaaaatc
     3481 ttgaccggca gcgctgttgc cgtcaccgcg gccgccgtcc tcgtgaccgc gggatcggca
     3541 tcggcgcaac gttggcacga ccaccgcaac tttgatggga gcctagcggg cgtcgcggcc
     3601 ggcgtggtcg gcggcgctgt cgccgcagcg acatcaccgc tgtgggcacc cggatattac
     3661 tacaacggct atccagacta ttcttatgcg ccggactacg cctatgcgcc ggactacgcc
     3721 tatgcgccgg gctatgcttc tgcgccgagc tactcctatg cgccgagcta ctcctatgcg
     3781 ccgggctact cctatgcgcc cggttacgca tatgcacccg gctacggccg cgatgacgca
     3841 tattgtgcgc agcggtatcg ctcgtatgac ccggcgtcag gaacctacct ggggtacgat
     3901 ggcatccgcc attcctgccc ctaattcttt caagatggcg aacccgcgtc ctaactgggc
     3961 gcgggtcgca acttttagaa tcaatcacag tcccggttaa aagtccccgg ttaaattcgc
     4021 aagtgtttgt ggcagatcac gcaatatccc ttattgctga gattattatt gatatttctt
     4081 gaatattgat actccaccgc cgcacgccgc aagcgggggc atgagcgctt cacggaccaa
     4141 agcagaattc gatcgattgc gatcgattca aaagccaaca tgaaaatgag gccgccgact
     4201 tgtcggcata cgcaactcga cggcccctgt cacctacgcg tcaatgattg ccacgatttc
     4261 cagggtcttt ggctccacaa tgactattcg ctctccgacc aggaaatact caaagccgcg
     4321 ccacgcgggc tcgattgcca ggatgctcgc tggaagggcc gcaaacttta cagtacccgg
     4381 tacgcgcgtt cccaccgata cgtcgaagtt cgcgctggca acgcgcggcg cgcttcgctc
     4441 cttcacgatc acctcgtgaa tctgtgtgcg cttctcgggg gtgatgttga cagttacatt
     4501 gttgctcgtc gcggcagatc cctgacctgt tgtgcggttt ccttctattt tggcacggtc
     4561 ctgctctgac ttgttctgct cggacgcccg attagtgcga tcctcgcgcg gcgcctgacc
     4621 ggtggtggtg cggttctgct ccgtccgttc ggtcttggcc cggtcctcgg atttgttctg
     4681 ctccttcggc gcctgggccg cgcggttctg ctccttattg ccgcggtctt gttcggcctt
     4741 ggcccggtcc tcggatttgt tctgctcctt cggcgcctgg gcggtcgcgc gattctgctc
     4801 cttattgcct cggtcttgtt cggccttgtt ctgctcagag gctcgatttg tccggtcctg
     4861 cgatgcctga ccggtggtct cgcggtgtcc ttttgatcct tcgccgcggg caccgggcgc
     4921 ggccccttcg ttttgatgcg gcgccgtgga aggctgctta ttgcttgacg acggcggcat
     4981 tttctcggcc ggtgcagtgc tcggaggctg ttgctgcgcc acggcgacgc ccatagcggc
     5041 gatgagcgcg atcgctgcgc tcgtcattaa gagcttggtt ctcttcattt cattctcctt
     5101 gcgcagtttt gttgcgcagt tttcacactg ggatcagact acgttttgct acgttttgcc
     5161 gcgcgcgatt ttcgccgcgc ggcgccacat aaaacaacgc tcggcgtgat atcgggttcc
     5221 ttgattcggc taaacatggc gggtgtgaac tgaatttaat ttggtttctg aaaaacgatt
     5281 gagtatgcgc ctcaaacgga accttagcct aaaggcatag cgacaaactc agcagtgtcg
     5341 cctgactttg actggttcag caacgaaatg cctcccgacc gcttaaagga ttgcggacag
     5401 ggtcatgaaa gcacgaccga aacttgagcc ctaccgctgc gcctcgcgat gtctagtgag
     5461 acactgctgc cccgccgccg gattttgaga tcgatgttcg atttgccgag ctgtagattg
     5521 cgcaatacaa cctcttcgag gaacatgggc agctgcgggt tacgcaatct aatttcgttg
     5581 ttgtggggat cgaattccaa tccaagtgaa gcttcgagta atgtaaaggg cgtagcgctg
     5641 gcccaagcct gcggcgcgca ggcgactgga tagagcgtcg gtccgcgact gcgttgccgc
     5701 tgaaatccgc agaaaagctc cggtagccga cgcaagtcca tatatgtgct ggcatcgaac
     5761 aaccccttga agacctgtcc gaccaagtcc ttcaatccgt atctgccaag gccaagcgca
     5821 atcagagcat tgtcatgcgg ccagatcgac ccattgtgat acgacatcgg attgtaacgg
     5881 gcctccccct tggccaccgt gcgaatgccc cagccagaga aaaatcgcgg ttgcaacaag
     5941 cctgtcgcga ctttcgctgc gctttcagga cgcgtgatac cggtgaacag caactggcct
     6001 gcgtttgaag tccggacgcg acaaggcttc ttggttccgt cgagagcaag cgcataggta
     6061 tccagttccg gacaccagaa cgccgcatca aaatcttcgg ccaatcggtt tgcctgctca
     6121 tcgagatgac gagctttgtc aattcgccca attcgtctgg cgcacctcgc tgcaacttgc
     6181 tttgcggcat acacgtatcc ctgaacttcc gcgagtgcga tgttcccttc ggccaaccta
     6241 ccatcagaat gaaagactgc atcgtaggag tccttccagc cctgatttgc aagccccaat
     6301 tcagtagcgc gccgatactc cacgaagccg tctcgatcag ggtcgcccgg gccgtctatc
     6361 cagcgtaaag caacctcgat ggcaggccaa agctcagaca gggttaaatc atcgcccgta
     6421 cgctctgcgt ataatcccgc cagcagaaca aagagcgggg ttgcatcgac gctgccgtag
     6481 tagagcccaa atggaacttc tttgagaccg gccatctcac ccccgcgcat ttcatgaaga
     6541 attttgccgg gctgcgcatc tgcatctgga tcatctatct tggcctggta aaaagcgagc
     6601 cgccgcagga caccacgcgc cacgctcgga tcaaaccaca gcatctgcaa cgcggtaatc
     6661 agcccgtcgc gaccgaatgt ggtcgagtac cagggaatcc cggcgtatgg atacggccct
     6721 tgcggcgttt cggtgatcaa catgtgcagg tcagccatcg accgacacac cacctcattg
     6781 aaaatgtcgt tcgatgtcac gactgtcgtg acacaacgat ctccatcgcg acgctcgcga
     6841 tggattgcct tgagtcgttg gagaaatggc atcggcggcc gtccggtcgc gtcgtcacac
     6901 cgcgccgtga tgaaaagtgg cgcgtattct ccccgcttca actgcatgcg atagaccgcc
     6961 gtctttgccg acaattcagc ggggggagga tcgaacgtca gatcggtgcg tcggcccttg
     7021 ccatcgagcc cctgatagat caacgctgct tgagcggggc tcacgacacc gccggcagcg
     7081 acgccgcgac gcctccgttg cgctccacgc acctcaaaga gatcagcgaa gtcgttgtca
     7141 aagttgacgg caagctgcaa aacgaccgga acatcaccgt gattgcggac taccagtctt
     7201 tgatgtgctt cgttccggta caaaaagata gtgcgtacaa tgtgcagcgt atcctgctga
     7261 agcacaacat tgccgtcgaa gtgtatttcc ggattagtca gatcgatggt cagcagtgca
     7321 ttgtcgtcgc gggtgttgga gccgagcagg agcggttgat gtccgcagac gagaagctcg
     7381 agttgcgaga ggaaccgcgt atcgttgtga aacaggccat ctggaccgcc ggctgaagcg
     7441 cctatgtcgc cgtggctgtc caccacgata aaagtatcgc catatttgag tgtgcggcgt
     7501 ggcttcgcgg cagtcccagt ggcctgaata tgaaaccgcg cctcatgaat cgggttaatc
     7561 tcggcggttg tgacaccggc ggaattggtg attggcatgg tggtcgtatc cttgaatgac
     7621 cagggcatga tttggtgcat ccgccgtcat ttatgtaacg cgcgcgtagc gtcaatcgcg
     7681 caaaacgaca agatttagct tgccccagtt cgctctcgat tggcctgcga aaattgtgac
     7741 gtgcgggatc acatctgcga gtcgcaccgt attcaatccc agccgcttcg atcgaagtaa
     7801 gcattgtgaa cgcgccacga tccgcagctc ccgcgccggt ctccaagcgc tgcggcgacc
     7861 acgagacatg caggctcgaa ccaatcgaca actccttcgc agcaaaagtg ttacccggta
     7921 gtaagccatg atcttttgca tgggaaccgg caacggacgg cgcttagaat aagccatcgt
     7981 ccgggatcgt attcaagagc tttccagtcg tgcctccgtc ggccgatgtc ggatgtgggt
     8041 cagatcgccg tcacggtgtg ccggtgtcga tggtcggtct gcgttcgaaa gcggaaagga
     8101 atctgctcgc tgagcggcgc gacggcgtag ttctccgtct ctggaaagcc ccgccccgga
     8161 ttctccaggt ggggcgatgt ggctggtttc aaggatccgg atcgccgcac gtcacccgag
     8221 cagagccggc agccaggtgg cgatgttcgg aaacgcgatg atcatcacga gaagcaccaa
     8281 gctcagcacg atatacggta tgacggcgcg gaaaatgtca gccatgctca cttgcggcgg
     8341 ggcaacgcca cgcatggtca tcaggagcaa cccatgcggc ggcagcagca ggccgagctg
     8401 catgcag
//
LOCUS       DATILV010000271         2606 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2620794, whole genome shotgun sequence.
ACCESSION   DATILV010000271 DATILV010000000
VERSION     DATILV010000271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2606
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2620794"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..913)
                     /locus_tag="VLJ17_06220"
     CDS             complement(<1..913)
                     /locus_tag="VLJ17_06220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22609.1"
                     /translation="MGDVNFISSAQAGPTPLTKSQSDALSAYNKAVDNFKSILRQRRA
                     QIRANQQLPNLPGQALYLARNDMISAYKDLTTVLPSRIGRPNKFGIPPAYFDADNEPL
                     LDEYVDLFAIMQAPPVNAQNSKTPLKDVVDLGTAIARAKGLDAAHAEVAGRISLGLFF
                     AETNGNQNIGNARSNKYKGSFQTGPSEARNGETKWAAIRTSIAAFDPALIARDDKEEA
                     RVGGLDRRFNHWIAVRDALVNAHADLFPQIPAIVKALPDPIDQMRLFELIQIIPSPTK
                     AALRSGNLASYRVSDPTIMGFLRNNSMF"
     gene            complement(1199..1465)
                     /locus_tag="VLJ17_06225"
     CDS             complement(1199..1465)
                     /locus_tag="VLJ17_06225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22610.1"
                     /translation="MAYPDADWAHDFLDGRNARLGDVFGDVSTSAKNRGALDRLMATI
                     TPSCVLLDVMVALQTNGRIGAGTRRVLPSQVSPIGCSQAGSPTA"
     gene            1675..2037
                     /locus_tag="VLJ17_06230"
     CDS             1675..2037
                     /locus_tag="VLJ17_06230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014497882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSV22611.1"
                     /translation="MTNGRVEVITSVQRRRRWSSAEKQQLVLASLEPGASVSTIAREA
                     GIDPSQLYGWRRQLRAQPQIGFAPVRIAPEAAPAGPVGIGTIEIEFATGARMRITGAV
                     DTATLTSAVAVLADGRGR"
     gene            2392..2577
                     /locus_tag="VLJ17_06235"
                     /pseudo
     CDS             2392..2577
                     /locus_tag="VLJ17_06235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003616133.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
BASE COUNT          499 a          756 c          823 g          528 t
ORIGIN      
        1 tgaacatgct gttgttacgc aggaacccca tgatggtcgg gtcggacacc cggtagctcg
       61 ccaggttgcc cgatctgagc gcggccttgg tggggctcgg aatgatctgg atgagctcga
      121 acagccgcat ctgatcgatc ggatccggca atgccttcac gatcgccggt atctgcggga
      181 aaaggtctgc gtgcgcgttc acaagggcat ctcgcacggc gatccagtga ttgaatctgc
      241 gatccaaacc gccgacccgc gcctcctcct tgtcgtcgcg ggcgatcagg gcgggatcga
      301 aggccgcgat cgaagtcctg atcgctgccc atttggtttc accgttccga gcttcggatg
      361 ggcctgtttg aaagcttccc ttgtacttgt tcgatcgcgc gttcccgatg ttttgattgc
      421 cgttcgtctc ggcaaagaaa aggcccaggc tgatgcggcc tgccacctcg gcatgtgctg
      481 cgtccagccc cttggcccgt gcaatggcag ttcccaagtc gacaacgtcc ttcaacggcg
      541 tcttcgagtt ttgtgcattg acgggcggcg cctgcatgat ggcaaagaga tctacatact
      601 cgtcgagcag cggctcgttg tcggcatcga agtacgcggg aggaatgcca aatttgtttg
      661 gtcttccgat tctcgatgga agcacggtgg tgagatcctt gtaggcgctg atcatgtcgt
      721 tgcgagcaag atagagggcc tgtcccggca aattcggcag ctgttgattc gctcggatct
      781 gggcacggcg ctgccgcaag atcgatttga aattgtcaac ggccttattg tacgcgctga
      841 gcgcgtccga ctgcgatttc gtcagtgggg ttggcccggc ctgtgcggag gaaatgaagt
      901 tgacatcgcc gatgccggcc ggcgtgacca cgttcacgat cgtatggatg cgattgcaaa
      961 cgggcagcgc gaataagagc gggagcgcaa gagctgccgc gcctgcaagc cctccggaca
     1021 ctactgcctc gaagatgcgc gccacgacgt cgagaccgtg gcaatctcgc gaccgtgtac
     1081 acggcgcgtc agctcgacca aaatacgtaa acattgattt tcgccatccg gatgatccgc
     1141 ttggtgccag gtgcggagat attaagcacg atagaagctg attcgaaaac gacctggctc
     1201 aggcggtagg cgatccagcc tgtgagcagc cgatcggcga aacttggctt ggaagcaccc
     1261 ggcgcgttcc cgcccctatg cgcccgttcg tttgcagcgc taccatgacg tcgaggagca
     1321 cacatgacgg cgtgatcgta gccatcagtc gatcgagtgc ccccctgttt ttggcgctcg
     1381 tgctgacgtc tccgaacacg tcgccgaggc gggcgttgcg gccatcgagg aagtcgtgag
     1441 cccaatcggc atccggatat gccatagggc agggagctat cagtatgaga cgaaaacaag
     1501 aaccgtttcg ttgcgtcgat caaatcggaa tctgggcttg gcggtgatcg gcggcgttcg
     1561 gatactgcgc agcgctctat cgcggatttg actttaaacg tatccgtccg gtagcggccg
     1621 ccttgtggat catatgaggg tgtgagtcat gtgactattc acaggaatag tcagatgacg
     1681 aacgggcggg tcgaggtcat cacatcagtt cagcgccggc ggcgctggag ctcggcagaa
     1741 aagcagcaac tggtattggc gtcgctggag ccgggtgcca gtgtctcgac gattgcgcgg
     1801 gaagccggga ttgatccgag ccagctttat gggtggcggc gccagttgcg ggcacagccg
     1861 caaatcggct ttgcgccggt gcggatcgcg ccggaggcgg cgccagctgg cccggtcggc
     1921 atcggcacga tcgagatcga gtttgcgacc ggagcgcgga tgcggatcac gggcgcggtc
     1981 gacacggcga cgctgacgtc ggcggttgcg gtcctggccg atggacgtgg acgatgattc
     2041 caattccttc gggggtacgc gtgtggattg cactcctctc ctcatgatgt cctcctgcgg
     2101 cggcgggatt gcccgcaggc gaggcgatca tgattctgtc gacaaggtcg cgcagttcga
     2161 taagccgatt caccggcagc cgcggatcag ctacaattct cgccaacccg gcactgcccg
     2221 tcatccaggc aggaaaaatg aacgtcgcac cgtctgtccg ccgcacgtgt acatgttcga
     2281 caccgccgtg ctcataccgg ccagccaaaa taaaggcttg cccggtcagc ggatgaaacg
     2341 gataggtgac tgtgatttcc tgcgccggaa tccgggcaca atgagctccc ttcggatcgc
     2401 ggcggcgaac gcgccgcgat catgttcacg ctcatccaaa cagcaaggct caacaacgtc
     2461 gaccgccaag cctggcttgc cgacgtgctc gcccgcatcg ccgatcacaa gatcaacgat
     2521 ctggccgcgc tgctgccgtg gaactggcgc ctcacgcgtg tcgatcgcgc cgcctgacta
     2581 tggcggcgcc agcccatgcg ttcacg
//
LOCUS       DATILV010000272         3030 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4918288, whole genome shotgun sequence.
ACCESSION   DATILV010000272 DATILV010000000
VERSION     DATILV010000272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3030
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4918288"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..708
                     /locus_tag="VLJ17_06240"
     CDS             <1..708
                     /locus_tag="VLJ17_06240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22612.1"
                     /translation="KRLSEPWQLVRLGANSGQAATSSHRLAVPLVIAHLENKRSELRT
                     MMTSDEIGTIGDLVATIAKSLKGLGSELNLSEKSWAAQKLNAIRNDVHALLAAEIEAV
                     PTIVTRLFDLTAPVEGAHRDPEVIAVAETERQIALFEISRTFEGPLSLDTKITSALSH
                     MRHAMERAIAELLVLLRSGFDGVRNFCLVQISHAVRICTRLFGKKYASSIVAATNTAV
                     DDKTAHGVTSIPRRAAD"
     gene            complement(754..2517)
                     /locus_tag="VLJ17_06245"
     CDS             complement(754..2517)
                     /locus_tag="VLJ17_06245"
                     /EC_number="1.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent dehydrogenase, methanol/ethanol
                     family"
                     /protein_id="HSV22613.1"
                     /translation="MKSTAVVAVATALLASTGTFSTARAADMSFERALNADREPQNWL
                     LHHKNYQGHRFSALNEVDTGTVVSLRLAFTVGLGGLQAGGRYANGNLEATPIVDDGMM
                     YIPDGWGSVYAIDVRSGRKGEIKWKFDPGVDRVWAGDVACCGVNNRGVALWKDKVISI
                     ALDGRIFALNRSTGELAWERKTAEPAMGETVTLAPLVVRDLAIIGSAGGEFGIRGWID
                     ATDLNTGKQAWRTFTIPGVGEPGHETWKDGNEHWKHGGASIWVTATYDNDTDTIYQGV
                     GNAGPDYDAEYRPGDNKWAASVLAIDPSSGKIKWGFQYTPNDPYDYDEISEHQIIDAT
                     VNGENRKLLVHGARNGFYYALDRTNGAFIAGKQYVDELNWTRGLDPKTGRPLDYDPNK
                     DVQGYVEGTTATRTKPTGFRCPHVTGGKNWEPGAYNPELNLIYIPSTEGCSEINGVTQ
                     ADFEDQGGTVKPRERFTGGGNKNRTQPTGSIKALDPVTGETKAVSRSDLPNWSGVLAT
                     GGNLVFSGLWEGALVAYDGKTLKELWRFDTGCGLRAPPISYAVNGKQYIAVAAGPHWT
                     GTKPAALKYANACSMVYVFSL"
BASE COUNT          583 a          931 c          889 g          627 t
ORIGIN      
        1 aagcgcctat ccgaaccgtg gcaattggtg cggctgggcg cgaattccgg gcaggccgcg
       61 acctcatccc accgcctcgc cgtcccgttg gtgatcgctc atcttgagaa taaacggtcg
      121 gagttgcgca ccatgatgac ctccgacgag atcggcacga tcggtgacct ggtcgcgacc
      181 atcgccaaat ccctgaaggg acttggaagc gagctcaatc tgtcggagaa gtcgtgggcc
      241 gcccaaaagc tcaacgcgat ccgcaatgac gtgcacgccc tgttggcggc ggagatcgaa
      301 gcggtgccga ccattgtcac acggctcttc gatttgacag caccggtcga gggtgcgcac
      361 cgcgaccctg aagtgatcgc cgtcgccgag acggagcgcc agatcgcatt gttcgaaatc
      421 tctcgcacct tcgaagggcc gctatcgctc gacaccaaga tcacgtccgc attgtctcat
      481 atgcgccacg caatggaacg cgcgatagcg gagctcctcg tgttgctccg ttctggattc
      541 gatggtgtgc ggaacttctg tttggttcag atcagccacg cggtgcgcat ttgcacgagg
      601 ttgttcggca agaaatatgc ctcctcaatc gtcgcggcca ccaatacggc tgtcgatgac
      661 aaaacagcgc acggcgtgac aagtatcccc cgcagggcgg ccgactgagc agtccgccat
      721 gcgttagtat agcggcggtt agacaaaccc gccctatagg ctaaacacat acaccatcga
      781 gcacgcgttg gcatatttca gggccgccgg cttggtgccg gtccaatgcg ggccggcggc
      841 gaccgcgatg tactgcttgc cgttgaccgc gtagctgatc ggcggcgccc tgagaccgca
      901 accggtatca aagcgccaca gctccttcag ggtcttgccg tcataggcga cgagtgcgcc
      961 ctcccacaag ccgctgaaga cgagattgcc gccggtcgcg aggacgcccg accagttcgg
     1021 cagatcgctg cgcgacaccg ctttggtttc ccccgtcacc ggatcgagcg ccttgatgct
     1081 gccggtgggc tgcgtgcggt tcttgttgcc gccaccggtg aaacgctcgc gcggcttgac
     1141 ggtcccgccc tggtcctcga agtccgcttg cgtcacgcca ttgatttcgc tgcagccctc
     1201 ggtcgagggg atgtagatga ggttcaattc ggggttataa gccccaggct cccagttctt
     1261 gccgccagtc acatgcgggc accgaaagcc ggtcggcttc gttcgggtcg cggtggtgcc
     1321 ttccacgtaa ccctgtacgt ccttgttggg atcataatcg agcggccggc cggtcttggg
     1381 atcaagaccg cgggtccaat tcagttcgtc cacatactgc ttgccggcaa tgaaagcgcc
     1441 gttggtgcga tcgagtgcat agtagaagcc gttgcgcgcg ccatgaacga ggagtttacg
     1501 gttctcgccg ttcaccgtgg cgtcgatgat ctggtgctcg gagatctcgt catagtcata
     1561 aggatcgttc ggcgtgtact ggaagcccca cttgatcttt ccactgctcg gatcaatggc
     1621 aagcacgctc gcggcccact tgttgtctcc gggccgatat tctgcatcgt agtccgggcc
     1681 ggcattgccg acaccctggt aaatggtgtc cgtatcgttg tcgtaggtgg ctgtcaccca
     1741 gatcgacgcg ccgccatgct tccagtgctc gttgccgtct ttccaggttt cgtggccagg
     1801 ctcgccgacg cccgggatcg tgaaggtgcg ccaagcctgc ttaccggtgt tgaggtcggt
     1861 cgcgtcgatc caaccccgga tgccgaattc accaccggcc gatccgataa tggcaagatc
     1921 acgtacgacg agcggcgcaa gcgtcacggt ttcgcccatc gccggctccg ctgttttgcg
     1981 ctcccacgct agttcgccgg ttgagcggtt gagcgcgaag atgcgcccgt cgagcgcaat
     2041 cgagatcact ttgtctttcc acaacgcgac accgcgatta ttgacgccgc aacaggcgac
     2101 atcgccagcc cacacgcgat ctacaccagg atcgaatttc cacttgatct cgcccttccg
     2161 gccgcttctg acatcgatcg cgtagaccga gccccagcca tccgggatat acatcatgcc
     2221 gtcgtcgacg atgggagtcg cttcaaggtt accattggcg tagcgcccgc ccgcctgtag
     2281 accgccgagc ccgaccgtga aggcaagccg caggcttacg accgtgccgg tgtcgacctc
     2341 gttgagcgcc gagaaccggt ggccctgata gttcttgtga tgcagcagcc agttttgcgg
     2401 ttctcgatcg gcgttcaagg cgcgctcaaa cgacatatcg gccgcgcgcg cggtcgagaa
     2461 cgtaccggtc gaagcaagca acgccgtcgc aaccgccacc acagcggtgg atttcatggt
     2521 ggacctccct gctagcacct gccaaacgga acgtttcttt agcgctgaaa gttaatgacg
     2581 cgcaggaaca ccggtcaacg ctccattgcc caaaagcgtg gcgcatcggg cgcaacaggc
     2641 ttgccaattt tggcgcagaa ccgtagtccg cgccgctcgt tggtccgtgt gcgttgcagc
     2701 aaaaaatacc gtcaatggat caaccatcgt cctccaaatc gtgggcagcg cggtataaat
     2761 ttgacataaa tacaatattt tacaaacatt tgtctgagct gcaactcgag tgatgtgacc
     2821 ttgtgcgccg cattaaatgc gcttatttag aggctgctga ctttaaagga ttgccatgag
     2881 ccggatattg gaggcaggcg cgctaagtct tgctttggcg acaggggttg tcgccgcaaa
     2941 tgccagtgtt ccgctgccgg ccatccaaca ggccagcgga atgccgacgc tcgcgccggt
     3001 tttgaagaaa ataatgccgg ccgtggtcag
//
LOCUS       DATILV010000273         4175 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3132071, whole genome shotgun sequence.
ACCESSION   DATILV010000273 DATILV010000000
VERSION     DATILV010000273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4175
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3132071"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1117)
                     /locus_tag="VLJ17_06250"
     CDS             complement(<1..1117)
                     /locus_tag="VLJ17_06250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015664570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSV22614.1"
                     /translation="MFFDRIDSPAADPGQRSTSANSISRRGFLQAGATAGGGLLLSLS
                     LAFPNRDAEAAAADSFTPNAFIRIEPDGQIVLTVPYVEMGQGTYTSMPMLIAEELEVD
                     LKQVQVEHAPPNEKLYGNPLLGGIQVTGNSNAVRASWQPLRQAGATARAMLVTAAAKR
                     WNVDPASCRAQSGEVLHTPTGKRIKYGELAADTARIPIPGNVPLKRPQDFKLIGTSAK
                     RLDTPAKVNGTAVYGIDARPPGVKIATLAQSPVFGGRVKSVDDAAAKAVKGVRQIVRL
                     DDAVAVVADHMGAGKKGLAALNVEWDDGPHAKLNTAEIASELEKATLTSGAVAQNIGN
                     VEAALASAVTKVEAAYQVPFLAHATMEPMNCTVHVRKD"
     gene            complement(1188..2183)
                     /locus_tag="VLJ17_06255"
     CDS             complement(1188..2183)
                     /locus_tag="VLJ17_06255"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV22615.1"
                     /translation="MNFDQTASKAVDSGRSSASGNSIRRRDSLALAAAGLTASLLPTF
                     SFAETRKENSPMSFIKVGQENSTPIEIYYEDHGAGSPVMLIHGWPLNGDAWEKQTAAL
                     LAAGHRVITYDRRGFGRSSKPGIGYNYDSFAADLDALLSALNLTDVSLVGHSMGTGEI
                     TRYIGKYGTKRLRKAVLIGTLGPYLVKASDNPEGVDRKVFDETRAGIEADRPVALMEF
                     LKNFYSVGGADGKRVSERVIEANWNVAIGASPIGTLACVDAWIEDFRKDVARNEIPTM
                     IIHGDDDRILPADATSRRQAKMIKNVKYVEIKGGSHGIAWTRAEEINAELVKFLA"
     gene            complement(2186..2656)
                     /locus_tag="VLJ17_06260"
     CDS             complement(2186..2656)
                     /locus_tag="VLJ17_06260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015664569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HSV22616.1"
                     /translation="MAFNIKVNGNTHNVDVDGDTPLLWVLRDVLGMTGTKFGCGMALC
                     GACTVHVDGVATRSCITPIDSIGDSQIATIEAIGATSAGAKIQKAWLDREVVQCGYCQ
                     SGQIMSASALLASNPHPTDADIDDAMSGNICRCGTYVRIREAIKQAAQSTGQGG"
     gene            2672..2893
                     /locus_tag="VLJ17_06265"
     CDS             2672..2893
                     /locus_tag="VLJ17_06265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22617.1"
                     /translation="MLYPDIQGPASICFSGAKEVFVPGLIGRQLRRLCRAGMCIGKAS
                     HPALAGSDRHRCGTKEAAALLVNFLRECR"
     gene            complement(3004..3396)
                     /locus_tag="VLJ17_06270"
     CDS             complement(3004..3396)
                     /locus_tag="VLJ17_06270"
                     /inference="COORDINATES: protein motif:HMM:NF028004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P460 family protein"
                     /protein_id="HSV22618.1"
                     /translation="MGMIGYAKADREMARVFRLLTAAVGMLAIVSVSADSADDLTPPV
                     GYRHWFHANTMIVDKASLKDLGGMHNVHVNSVGEFALRKGGPYPNGTVFLTDLHEFSL
                     ADGSYVEGALKGLAVMAKDSKKYASTGG"
     gene            complement(3741..>4175)
                     /locus_tag="VLJ17_06275"
     CDS             complement(3741..>4175)
                     /locus_tag="VLJ17_06275"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HSV22619.1"
                     /translation="PVALAFNRGHWCPYCRINVDALARAEKEVAAEHRHVAAIVPDRQ
                     KFAVWLRSEAKAPFPVLTDIDNGYAMTLDLAFYVGDELKHMMVSAGWDPSVSQGTDNW
                     MLPIPATFIIGTDGIVHARFIDPDYRMRMAIEDLLAALRSAT"
BASE COUNT          749 a         1251 c         1269 g          906 t
ORIGIN      
        1 cgtccttgcg aacatggacc gtgcagttca tcggttccat cgtggcgtgc gcgaggaacg
       61 gaacctggta ggccgcctcg accttggtga cggcgcttgc aagggccgct tcgacattgc
      121 cgatgttctg cgcaaccgcc ccggaggtga gagtggcctt ctcaagctca ctggcgatct
      181 ccgccgtgtt gagcttggcg tgcggaccgt cgtcccattc gacgttcagg gccgccagcc
      241 ctttcttccc ggcccccata tggtcggcaa cgaccgcgac agcgtcgtcg agccgcacga
      301 tctggcgcac gcccttcacc gccttggccg ccgcatcatc cacgctcttc acgcgaccgc
      361 cgaagacggg cgattgcgca agcgtcgcga tcttcactcc cggtggccga gcgtcgatgc
      421 cgtagacggc cgtgccgttg acctttgccg gggtgtccaa ccgcttggcc gatgtgccga
      481 tgagcttgaa gtcctgcggg cgcttcaggg gtacgttgcc ggggatagga atgcgggcgg
      541 tgtcagcggc aagttcccca tacttgattc ttttgcctgt cggtgtgtga agcacttcgc
      601 cgctttgtgc gcggcaggac gccggatcga cattccagcg ctttgcggcc gccgtcacga
      661 gcattgctct cgcggtggcg ccggcttggc gcaggggctg ccaagatgcg cgtaccgcgt
      721 tcgagttacc cgttacctgt atgccgccca acaacgggtt gccgtagagc ttctcgttgg
      781 gcggagcgtg ctcgacctgc acttgtttca gatcgacctc cagctcttcg gcaatcagca
      841 tcggcatcga ggtataggtg ccctggccca tctcgacata aggcacggtc aggacaatct
      901 gtccgtcggg ttcgatgcgg atgaaggcgt tgggtgtgaa gctgtccgcg gcggccgctt
      961 ccgcatcccg gtttgggaat gccaagctga gactcagcag caggcctccg ccggcggtcg
     1021 ctccagcctg cagaaaaccg cggcgcgaga tgctgtttgc tgatgtcgac cgttggcctg
     1081 gatcggcagc cggggagtca atgcgatcga agaacatggt tagcctccgt gtccgatttt
     1141 ggcagtgcca atactcgtgc gcctcaccag cgcgtaatcg cgctgtctta ggcaaggaac
     1201 ttgacgagtt cggcgttgat ctcttccgcg cgcgtccagg cgatgccgtg ggagccccct
     1261 ttgatctcca cgtacttgac gttcttgatc atcttggcct gccgcctcga cgttgcatct
     1321 gccggcagga tgcggtcgtc atcgccgtgt atgatcatgg tcggtatttc gttgcgggcg
     1381 acgtccttgc ggaagtcctc gatccacgca tcgacacacg ccagggtgcc gatgggggaa
     1441 gcaccgattg cgacattcca attggcttct atgacgcgct cgcttacccg ctttccgtca
     1501 gccccgccca cactgtagaa gttcttcaaa aattccatca gtgcgaccgg ccggtccgcc
     1561 tcgatgccgg cgcgggtttc gtcaaacacc ttccggtcga cgccttccgg attgtcggac
     1621 gccttgacga gatagggccc gagcgtgccg atcagcacag cttttcggag ccgcttggtg
     1681 ccgtatttgc cgatgtacct tgtgatctcg ccggtgccca tggagtgtcc caccagcgag
     1741 acgtcggtaa gattcaacgc gctcaacaga gcatcgagat cagccgcgaa actatcgtag
     1801 ttgtacccga tgcctggctt gctcgagcgg ccgaaaccgc ggcgatcata ggtgatcacg
     1861 cgatggccgg cggccaggag cgcggcggtc tgcttttccc atgcgtcgcc gttcagcggc
     1921 cagccgtgga taagcatcac cggcgaaccc gcgccgtgat cctcgtaata gatctcgatg
     1981 ggcgtcgagt tttcttgtcc gaccttgatg aaactcatgg ggctattctc cttcctggtc
     2041 tcggcgaatg agaatgttgg cagcagcgac gcggtaagtc cggcagcggc aagcgcaagg
     2101 ctgtcgcgtc ggcggatgct gttccccgat gccgatgatc ggcccgagtc gacggcctta
     2161 gacgcagttt gatcgaagtt catggtcagc ctccttgtcc ggtggattga gcggcctgct
     2221 tgattgcctc gcgaatgcgg acataggtgc cgcagcggca gatgttgccg gacatggcgt
     2281 catcgatatc ggcgtccgtc ggatgcgggt tgctcgccag cagcgccgaa gcggacatga
     2341 tttgccccga ctggcagtaa ccgcattgga caacttcacg gtccaaccaa gccttctgaa
     2401 tcttggcgcc cgccgaagtc gcgccgatcg cctcgattgt tgcgatctgc gagtcgccga
     2461 tgctgtcgat tggagtgatg caggagcggg tcgcgacgcc atcgacatgc acggtgcagg
     2521 cgccgcatag cgccatgccg cagccgaact tcgtgccggt catgcccagc acatcgcgca
     2581 atacccaaag gagcggcgtg tcgccatcga catcgacgtt gtgcgtattg ccgttgactt
     2641 tgatgttgaa ggccatggcg tcttctcctt agtgctctac cccgatattc aggggccggc
     2701 atcgatctgc ttcagtgggg caaaggaggt gttcgtcccc ggcttgatcg gccggcaact
     2761 gcgccggctt tgccgggctg ggatgtgcat cggcaaggcc agtcatcccg cgttggccgg
     2821 cagcgatcgt catcgctgcg gcaccaaaga agcggcggcg ctgctggtta atttcctcag
     2881 ggaatgtagg tagaataggc ataatcctga tccttttttt ggtcgatgac attcgaagca
     2941 ttgtttggtg gcatccgtca cgactggctt cttgggatct cctccctccc agaattgaaa
     3001 gccctaacca cccgtcgagg catatttttt tgaatccttc gccattacgg ccaaaccttt
     3061 tagggcgccc tccacgtaag agccgtcggc cagcgaaaac tcatgtaagt cggttaagaa
     3121 cacggtcccg ttgggatatg gcccgccttt cctgagcgcg aattcgccca ccgaattgac
     3181 gtggacgttg tgcattccgc caaggtcctt gaggctcgct ttgtcgacga tcattgtgtt
     3241 ggcgtggaac cagtgccggt aaccgacggg cggtgtgaga tcgtcggcgg agtcagcgga
     3301 cacggagacg attgccagca tgccgactgc tgcggtaagc aaacgaaata cccgcgccat
     3361 ctctctgtcg gctttggcat atccgatcat gcccatggta agctctccgt gtttgacaga
     3421 tcgtcgcgtt ggcggaaaac gacctaaatc gttccgaagc aacgagcgtg cacacgatgt
     3481 atgtcgacaa gtatgtcgac aagccgctgc gcggccatgg cctgatgccc gtcggctttg
     3541 tatagcgctg tccgcgcagc gggaaatgcc ggttggttag agattctata ctttgccgtt
     3601 atggtctcgg ccgtgacact tcgtgcgtgt tccccttatc gcggggcgca cggtcaaaac
     3661 ggtccgactt ggccacaata aggatagctc aaacacgaac tcttgcagta gccatcagga
     3721 ctatgcactc ggcgccggaa ctacgtcgcg gaccgcaacg cggcaagcag gtcctcgatg
     3781 gccatgcgca ttcggtagtc cgggtcgata aagcgtgcgt gaacgatccc atcagtgcca
     3841 atgatgaagg tggcgggaat cgggagcatc caattgtcgg tgccctgtga cactgacgga
     3901 tcccatcccg cgctgaccat catgtgcttt aactcgtctc cgacgtaaaa tgcgaggtca
     3961 agggtcatcg catagccgtt gtctatatcc gtgagaactg gaaacggcgc cttggcttcg
     4021 gatctgagcc acaccgcgaa cttttgtcga tcgggcacga tcgcggcaac gtggcggtgc
     4081 tcagcagcga cctccttctc agcgcgagcc agcgcgtcga cgttgatacg acagtagggg
     4141 caccagtgcc cccgattaaa agctagcgcg accgg
//
LOCUS       DATILV010000274         2115 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_62979, whole genome shotgun sequence.
ACCESSION   DATILV010000274 DATILV010000000
VERSION     DATILV010000274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62979"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..909)
                     /locus_tag="VLJ17_06280"
     CDS             complement(<1..909)
                     /locus_tag="VLJ17_06280"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSV22620.1"
                     /translation="MDFPINPPIGERVRRKETQRFVTGTGRYVDDLLPPGTLHVSFVR
                     SSCAHAKIKSIDVEAARSMPGVRAVFTGKDIARHVKPLRVGGSSVLRPVTLYPLAVDK
                     IRYFGEPLAVVVADNRYLAEDAAEMVSVDYDLLPAVIDPEAAMEPSAPLVHEDAGSNV
                     VYKYHFATDGIDKVFEDADVVVKERIRSHRITACPIEPRAYLASYNKEEDSLTMWSAT
                     ANPHSLRGRIADILSFPEGKIRVIAPDVGGSFGVKIQTYQEELLLPYLSRQFGRPVKW
                     CETRVEHMRNGRHGRDQIHYIEMALKK"
     gene            complement(926..>2115)
                     /locus_tag="VLJ17_06285"
     CDS             complement(926..>2115)
                     /locus_tag="VLJ17_06285"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSV22621.1"
                     /translation="YGVSEDLTDAEAVRFWKDKLKEVKPVEPLYVENGTVKQNVMVGD
                     DVDLTKFPWPRWHQRDGGPYICATAAVTRDPDSGYLNVGSYRYMLLSKNTTVAHIGSG
                     HHGDVIRKKYWAKGKSCPVAVSLGQEPALFEAAGTNLSWGVSEYGFTGWMRGAPVEVT
                     KGLTTDLPIPATAEVVLEGEMLPPEGGTQIEGPFGEMSGYYGGGARPAPVTVIKSVLY
                     RNDPIILGSPPFLGASRGILSSRGILIWNELEGLGIPNIIGVNYSWGMTIIAIKQAYP
                     GHAMRAAHGALGGTAGYHGRFVIVVDDDIDPFDLHDVMWALATRCDPETSLDVCRRIW
                     SYKIDPRLPKHKKEAADYTGAVAIIDACKPYHWIDEFPRTTKISDELAKATEEKWGKF
                     FKD"
BASE COUNT          427 a          644 c          586 g          458 t
ORIGIN      
        1 ttttttgagc gccatttcga tgtagtgaat ctgatcgcgc ccgtggcgcc cgttacgcat
       61 gtgttcgacc cgcgtctcac accacttgac cggccgaccg aactggcgcg acagataggg
      121 caagagcagt tcttcctgat aggtttgaat cttgacgccg aacgaaccgc cgacgtccgg
      181 tgcaatcacg cggatcttgc cttcgggaaa actcaagatg tcggcgatgc gccctctgag
      241 cgagtgcggg ttggccgtcg ctgaccacat ggtcaggctg tcctcttctt tattatagga
      301 tgctagataa gcgcggggct cgatcgggca agccgtgatg cggtgactgc gaattctttc
      361 tttgacgaca acatcggcgt cttcgaatac tttgtcgatc ccgtccgtgg cgaaatgata
      421 cttgtaaaca acattactgc cggcgtcttc atgaacgaga ggcgcgctcg gctccatcgc
      481 ggcttccgga tcgatgaccg ccggcaatag atcatagtcc accgacacca tttcggcggc
      541 gtcttccgcc agataacgat tgtccgccac caccaccgcc aaaggctcgc cgaaataccg
      601 aatcttgtcg accgccagag gataaagcgt tacgggtcgc agcaccgagc tgccgccgac
      661 ccgcaacggc ttaacatggc gcgcgatgtc tttgccggta aacacggcgc gtacgccggg
      721 catcgagcga gctgcttcga catcgatcga tttaattttc gcgtgcgcgc aagagctgcg
      781 cacgaacgag acatgcaggg ttcccggcgg cagcaaatcg tcaacatagc gccccgtgcc
      841 ggtgacgaag cgctgggtct cttttctcct gactcgctct ccaatgggag gattgattgg
      901 aaaatccata tggctgttag gggagtcaat ctttgaaaaa cttgccccac ttctcctcgg
      961 tggcttttgc cagttcgtcg ctaatcttcg tcgtgcgcgg aaattcgtca atccagtggt
     1021 acggcttgca ggcgtcgata atcgccaccg caccggtgta atcggcggct tcctttttgt
     1081 gtttcggcaa gcgcggatcg attttatagc tccagattct ccggcacacg tcgagtgaag
     1141 tttccggatc gcaccgcgtc gccagagccc acatcacatc gtgcaggtcg aaaggatcga
     1201 tgtcgtcgtc cactacgatg acgaagcggc cgtgataacc cgccgtcccg ccgagggcgc
     1261 cgtgcgctgc tctcatcgcg tggccgggat aggcctgttt gatggcaatg atggtcatgc
     1321 cccaggagta gttgacgcca atgatgttgg gaatccccaa cccctcgagc tcgttccaaa
     1381 tcaaaatgcc ccgcgacgaa agaatcccac ggctcgcgcc gaggaacggc ggcgaaccca
     1441 ggataatcgg atcgttgcga tagagcacac tcttgatcac cgtcaccggc gcggggcgcg
     1501 caccgccgcc ataataccct gacatctctc cgaacggtcc ttcgatctgc gtgcctcctt
     1561 cgggcggcag catctcgcct tcgagcacga cttcagcggt cgccggaatc ggcaggtccg
     1621 ttgtcaggcc cttagtcact tccacgggag cgccgcgcat ccatccggtg aaaccgtact
     1681 ccgacactcc ccaactcagg ttggtgccgg cagcctcaaa aagcgctggt tcctggccga
     1741 gagagacggc aacggggcac gactttcctt tagcccaata tttttttcga atgacatccc
     1801 catgatggcc ggagccgata tgcgcgaccg tcgtattctt actcagcagc atgtagcggt
     1861 acgatccgac gttcaaatag cctgagtcgg gatctcgcgt cacggcggcg gtcgcgcaga
     1921 tgtagggccc gccgtcgcgt tgatgccatc gcggccaggg aaacttcgtg agatccacgt
     1981 catcgcccac catcacgttc tgtttcacgg taccgttctc gacgtaaagg ggctcaacag
     2041 gtttcacctc tttgagcttg tccttccaaa agcgaacggc ttccgcatcg gtgagatctt
     2101 ccgaaacgcc gtaga
//
LOCUS       DATILV010000275         6190 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1597699, whole genome shotgun sequence.
ACCESSION   DATILV010000275 DATILV010000000
VERSION     DATILV010000275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6190
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1597699"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..240)
                     /locus_tag="VLJ17_06290"
     CDS             complement(<1..240)
                     /locus_tag="VLJ17_06290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22622.1"
                     /translation="MGNILPFTLVLFIISLSCIEFLRDTNSITTLWPSNAVVLALLLR
                     SMRNLRNYGLIFLGGGSAIAFANFADGNGPALSVML"
     gene            complement(356..1954)
                     /locus_tag="VLJ17_06295"
     CDS             complement(356..1954)
                     /locus_tag="VLJ17_06295"
                     /inference="COORDINATES: protein motif:HMM:NF017081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MASE1 domain-containing protein"
                     /protein_id="HSV22623.1"
                     /translation="METSLDALLLLALVLFVVSLTCIEFARSANLISTLWPSNAIVLA
                     LLLRTSLDGRNYGLIFLGSGTAIALANFASGYSPALSAVLTIANIAEVATAWILLAIY
                     KNGDSDLTRVQKLYVFMMLAGGIAPLVSASIGATALAAALGKPWVPIWLNWYASNALG
                     MIIVTPFLLSLKLEEWYALRIKNRFNEALGVLVLMVLVAVVASFYRSFLFITAPVVLF
                     ATFRFGVIGAAAGTLVVAIIVNIFIVKGIGSAILPQSDLSERILVMQIFLAATALWSL
                     PVAAVLAERDRLLAALSSANSRLAVEDERKSQLVVGLHRRLVNAEERERLRLSHELHD
                     QTGQSLTAAMLELKDIEPLVTDDGRERLHMLRDRMAEIGKTLHRVAWELRPASIDELG
                     LASALNDYISEWGSHYSIGVDFYSGGDSKFDELSDEARTTIFRVAQEGLTNVVKHARG
                     ATSVSVGIEYVNAMIQLVIEDDGCGFNTGAVRGHADNHNGFGLDGMRERLISLGGELE
                     IESSVGAGTTIFARIPFKPEKMTA"
     gene            complement(2752..3000)
                     /locus_tag="VLJ17_06300"
     CDS             complement(2752..3000)
                     /locus_tag="VLJ17_06300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22624.1"
                     /translation="MTIAVVNGFLCFSSCEAATAAKGQNPHHYPATADHGSVDVPGRD
                     GAAVIFGGALKVSGNGGTIRLGTNSSNEPASTSTDILV"
     gene            3162..4199
                     /locus_tag="VLJ17_06305"
     CDS             3162..4199
                     /locus_tag="VLJ17_06305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018330152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSV22625.1"
                     /translation="MIFRQLFDQVSGSYSYLLASRSGGEALIIDPVLEKVDRYLQLVK
                     ELDLKLVKALDTHLHADHITGLGALRDRTHCITVMGEQTKADVVSMRLGDGDKLTIEG
                     LALDVMYTPGHTDDSYSFVMPDRVFTGDTLLIRGTGRTDFQNGDPRAEYESIFGRLLK
                     LPDATLVYPAHDYKGDTVSTIGEEKAFNPRLQVKSVAEFVDLMNNLKLPNPKMMDVAV
                     PANMKVGLAQEEIARRGWSVTAEQAQHLVGLPDVALIDLRERGERERHGAIPGSLHVP
                     YPSLQENIRVGGVLYELAKSTGKRLLFYCAFGERSAMAVQTAQEAGLSTACHIDGGAD
                     AWKKGGGVLAR"
     gene            4374..4673
                     /locus_tag="VLJ17_06310"
     CDS             4374..4673
                     /locus_tag="VLJ17_06310"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSV22626.1"
                     /translation="MSHAQGDCHDTPRRRFARRCEYRCRLKYAIVSHAHIDHIGGAKF
                     LQDTYGTSIAMAAADWDFTEKSTRLPTTIKPSRNGCFVARIAVSWRIGTQWREKS"
     gene            complement(4832..5407)
                     /locus_tag="VLJ17_06315"
     CDS             complement(4832..5407)
                     /locus_tag="VLJ17_06315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015664301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003839 - gamma-glutamylcyclotransferase
                     activity [Evidence IEA];
                     GO_function: GO:0061928 - glutathione specific
                     gamma-glutamylcyclotransferase activity [Evidence IEA];
                     GO_process: GO:0006751 - glutathione catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase"
                     /protein_id="HSV22627.1"
                     /translation="MHLSQSPANEDLWVFGYGSLMWRPDFAYLERVPARLIGLHRALC
                     VYSFVHRGTPEKPGLVLGLDRGGACRGIAYRVAAVDRDATIAYLREREQITSVYLETL
                     RRITLATTPPREVTALLFLVDRSHPQYAGRLNLERQIHLVRQGHGRSGANRDYVLSTV
                     AEIEAQGCHDSELHTIAERLKGGHEAHAKMD"
     gene            5493..>6190
                     /locus_tag="VLJ17_06320"
     CDS             5493..>6190
                     /locus_tag="VLJ17_06320"
                     /inference="COORDINATES: protein motif:HMM:NF021423.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2125 domain-containing protein"
                     /protein_id="HSV22628.1"
                     /translation="MSTQNESPRSRPWLIAVPTIVLVLLGVVWSGFWYWSTLAAESAM
                     AVWRAREAEAGRIYGCASTTFGGYPFRLEVTCAEPSVDDRMAALSIRARNLNAVAQVW
                     DPSLVIGEIGGPMTVASFSGPPTATVDWTLAQASLHSAPGAPERLSIVVDKPNLASVP
                     PAGPLAKAEHMEFHARFAAESTPGHAVLDLGVDVRNATAPALVAWLGTFGPLASASTD
                     LSFVAVLRGASDLAP"
BASE COUNT         1350 a         1808 c         1829 g         1203 t
ORIGIN      
        1 cagcatcaca ctgagtgcgg gaccgttccc gtcggcgaaa ttcgcaaagg caatcgcaga
       61 gccaccgccg aggaatatca ggccataatt cctcaaattg cgcatcgacc ggagcaggag
      121 cgccaagaca acggcgttcg acggccacag cgtggtgatc gagtttgtat cgcgcaaaaa
      181 ttcaatgcag ctaagcgaaa taataaatag caccagcgtg aacggcagga tgttgcccaa
      241 cgagatctcg aaaccgtctt ttgccgggct ctgctgtgga gttgccttga agagcgatcg
      301 aactcgcgca agaaagatca tgccgtcaac cttgctgctc gaacgcaaaa aacgctcatg
      361 ccgtcatctt ttcgggctta aagggaatac gggcgaagat ggtggttccg gcgccgaccg
      421 atgactcaat ctcaagttcg ccgccaagcg aaataagcct ctcgcgcatt ccgtctagac
      481 caaatccgtt gtggttatct gcatgcccgc gtacggcacc agtgttgaag ccgcaaccat
      541 catcttcgat caccagctgt atcatcgcgt tcacgtattc aatgccgacg ctgacggacg
      601 ttgctcctcg tgcatgcttg acgacattgg tcaatccctc ctgcgcgaca cgaaagatgg
      661 tcgtgcgtgc ctcgtccgat agctcatcga atttggagtc accaccactg taaaaatcga
      721 ccccgatact gtagtgagaa ccccattccg atatgtagtc gttgagcgca ctcgccaatc
      781 cgagctcatc gatcgatgcc gggcgcaact cccaggcgac ccgatggagc gttttcccaa
      841 tctctgccat gcgatctcga agcatatgca ggcgctcgcg gccatcatca gtgaccagtg
      901 gctcgatatc tttgagttcc agcatcgcag ccgtaaggct ttggccggtc tgatcgtgaa
      961 gctcatgtga caaccgcaac cgctctcttt cttccgcgtt caccagtcgt cgatgtagac
     1021 cgacgacaag ctgagatttt ctttcgtctt ccaccgccaa acgcgagttt gccgaggaga
     1081 gcgcggctaa gagacggtcg cgctccgcta gtaccgcggc caccggcaat gaccacaaag
     1141 cggtagctgc caggaaaatc tgcatcacca atatccgctc ggacaggtca gattgcggaa
     1201 gaattgctga gccgatcccc ttgacgatga atatgttgac gatgattgcg accaccaaag
     1261 tccccgccgc cgccccaatg acgccgaacc gaaacgtcgc gaacaaaacg actggagcgg
     1321 taataaagag aaaagatcga taaaacgacg cgacaacggc taccagcacc atcaggacaa
     1381 ggacaccgag agcttcatta aagcgatttt tgatacgcag cgcataccac tcctccaatt
     1441 ttaagctcag caggaacggc gtcacgatga tcatgccgag ggcattagat gcgtaccagt
     1501 tcaaccagat gggcacccat ggttttccaa gcgcggccgc caaggcggtg gcaccgatcg
     1561 atgcgctcac gagtggagca atacctcccg caagcatcat aaaaacatat agcttctgaa
     1621 cgcgcgtgag atcggaatcg ccatttttat atatggccag aagtatccac gcggtggcca
     1681 cctcggcaat attcgcaatc gtcagcaccg cgctgagtgc aggactgtac ccgctggcga
     1741 aattggcaag cgcaatcgca gtcccactgc cgagaaatat gagtccgtaa ttcctcccat
     1801 cgagcgaagt ccggagcaga agtgccagga caattgcatt cgatggccaa agcgtgctga
     1861 tcaagtttgc actacgggca aattcgatgc aggtgagcga gacgacgaac agcaccagcg
     1921 cgagcagtag aagggcgtct agcgaggttt ccacggcggc ctttgaaggg atccgcgatg
     1981 aagttgcctt gaagagcaat cgaactcgcg caagaaacgt catgccatcc actctgccct
     2041 gcgagcacgc aacgattgtt acgccgacac cgatcggtga tattgaacca caccgggcga
     2101 tcgctaaagc cgcaatatgc tacctatatt agtaaggctt gttatgatgt tagtaaggca
     2161 aatcctgaca cggcgcgggt tttcctgtcg cgcgagaggt gttggacagc taggaatcct
     2221 cccaaggttg tatcattaga taaggcggag acgggaactt tcaattcgcg ctggcattgg
     2281 ctttaaggcc atacccggtt gggctgagcc ccagagcgcc gcgttaaccg gagagacagc
     2341 gacatggaca gcaggaccga ggccgattta gaagatatgt tcccagcggt cgcgtggcgg
     2401 gcaccgctac caacgcaaag gcgtgacggc acattgggct ttgcctgtcg cttctgcatc
     2461 aatatcaatg gtctggaggc gcgggatacc gacattttgc cccaaaccct gacggctttt
     2521 gaggcgcaca tgcgcacagc tcactgccgc gccgttgagc ggatcgaaac gcctgtgcca
     2581 ttgcgacaat tgcggcagct tcgtagataa ttccgtagcc tgttacggga agctcaccgc
     2641 aacgatgtca tggtgacgct gagcgatcac cgaccggcaa cccgtgacgc tcaatgcgct
     2701 caaatatcca tgcgcgagtg gcgtcgcggt cgtgacccaa acgcaccgcc cctacaccaa
     2761 aatatccgtg gaggtgcttg ccggttcgtt cgacgagttc gttccgagcc ggatagtgcc
     2821 gccgtttcca gacaccttca gggcgccccc gaaaataacg gcggcgccgt cgcgcccggg
     2881 aacgtctacg ctcccgtgat cggcggtggc ggggtaatgg tgcggatttt ggcccttcgc
     2941 cgcagtggcg gcctcgcaag acgaaaagca caggaagccg ttaacgaccg cgatagtcat
     3001 gaatgctact ccgtgatgcc tgaaactaat tcgcagtggt aaacgaacgc attgcccggc
     3061 gtcatgtgcc tgcggtcgaa tttgcggtat ggttttcaaa atcgacataa ccgcacccac
     3121 cgacacattg cgacctattg ggcggcagaa agggtcgtgc cgtgatcttc cgccagctct
     3181 tcgatcaggt ttccggcagc tattcgtacc tgctcgccag ccggtcaggg ggagaggcgt
     3241 tgatcattga tccggtgctg gagaaggtcg atcgctattt gcaactcgtg aaagagcttg
     3301 atctgaagct cgttaaggcg ctggacactc accttcacgc cgatcacatc accggcctcg
     3361 gggcgttgcg cgaccgcacc cattgcatca ccgtgatggg agaacagacc aaggccgatg
     3421 tggtctcgat gcggctcggc gacggcgaca agctcacgat cgagggtctt gcgttggatg
     3481 tcatgtatac acccggccac accgacgatt cttacagttt tgtcatgcca gaccgggtgt
     3541 tcaccggcga tacgctcctc attcgcggta ccggccgcac cgattttcaa aacggcgatc
     3601 cgcgcgcgga atacgaatcg atctttgggc ggctgctgaa attgccagat gcgacgctcg
     3661 tttatccggc gcatgattac aaaggtgaca ctgtctccac catcggggag gagaaggcat
     3721 tcaatccacg actccaggtc aagtcggtcg cggaattcgt tgacctgatg aacaacctca
     3781 agctccccaa tccgaagatg atggacgtcg ccgtgcctgc caacatgaaa gttggcttgg
     3841 cgcaggagga gatcgcccgc cgcggctggt cggtaaccgc ggagcaggcg cagcacttgg
     3901 tcggccttcc tgacgtcgcc ctcatcgacc tgcgcgagcg tggcgagcgt gagcgccatg
     3961 gcgccattcc cgggtcgctg cacgtgccat acccgtcgtt gcaagaaaac atccgcgtcg
     4021 gcggcgttct atatgagctc gccaaatcta ccggcaagag gcttctgttc tattgcgcct
     4081 ttggcgaacg ctccgccatg gcggtgcaga ccgcgcagga ggccggtctt agcacggcct
     4141 gccacatcga cggcggcgcg gatgcctgga agaaaggcgg cggcgtgctg gcgcgttgac
     4201 gctcctccca aaggaagtcg ggtcgagcgg taagcaaaac cgtggggcgg tgccgccata
     4261 tggatgggat ttcgcccgcg ctcaatccgg gccacgcttg ctgttagtta aacaagcctg
     4321 tccgtgtcat tgcgtggctt gattgggcga taatggcaac caagaacgct ccaatgtcgc
     4381 acgcgcaggg ggactgccat gacaccccac gccgtcgctt cgctcgccgt tgcgagtatc
     4441 gctgccgcct caaatacgcg atcgtgagcc acgcccatat cgaccacatc ggcggcgcca
     4501 aatttctgca ggatacttat ggcaccagca tcgcgatggc ggctgccgac tgggatttca
     4561 ccgagaagag cacgcggctg ccaaccacga tcaagccctc acgcaacggg tgtttcgttg
     4621 cgcgcattgc ggtttcgtgg cggatcggga cgcaatggcg cgaaaaatct tgaacgtctg
     4681 gccgcaaggc gtcagcctgt gcagaggaac gctctggcgc ggctcgcaag agccgcgtga
     4741 aatgggcctc gaagaagcag gaaccgaacg gcattggcaa gctttgcgca gctcaacttt
     4801 gcgcaggttt cgggagagcg gtcgaacgaa ctcaatccat ctttgcgtgg gcctcatgcc
     4861 cgcccttgag ccgctcggcg atggtgtgca gttcggaatc gtggcaaccc tgcgcctcga
     4921 tctccgcgac agtggataac acatagtccc ggttggcccc ggatcggcca tgcccctggc
     4981 gtacaaggtg gatctgacgc tcaaggttaa ggcgcccggc atattgagga tggctgcgat
     5041 cgaccaagaa cagcagcgcc gttacctccc gcggcggcgt cgttgcaagt gtgattcgac
     5101 gcaaggtttc aagatagacg gaggtgatct gctcgcgttc gcgcagatat gcgattgtgg
     5161 cgtcgcgatc gactgccgcc acccgatagg cgatgccgcg gcaggcgccg ccacggtcta
     5221 ggccaagcac gagtcctggc ttttccgggg tgccgcgatg aacaaaggaa tagacgcaca
     5281 acgcccgatg caggccgatg agccgcgccg ggactcgttc gaggtaagca aagtctggcc
     5341 gccacatcag cgacccatag ccaaaaaccc aaagatcctc attggcggga gattgagaaa
     5401 ggtgcatgaa gaaaagattg cagtgtggcg aggacgcaag cttcgctaac agttggaagg
     5461 gggcgacgca agatcgtgat tgaggagagc gcgtgagcac gcaaaacgaa tccccgaggt
     5521 cgcggccatg gctgatcgcc gtgccgacga tcgtactcgt ccttctgggc gtggtctggt
     5581 caggcttctg gtactggtcg acgctggcgg cggagtccgc gatggcggtg tggcgcgccc
     5641 gcgaagcgga ggcggggcgc atctatggct gcgccagcac caccttcgga ggttacccgt
     5701 tccgtctcga agtgacttgc gcggagcctt ccgtggacga tcgcatggct gcgctgtcga
     5761 tccgagcgcg caatctcaat gcggtggcgc aggtgtggga tccgagcctg gttatcggcg
     5821 agattggagg gccgatgacg gttgcgtcat tcagcggccc gccgaccgcg acagtcgact
     5881 ggacgctcgc tcaggcgagc ctgcacagtg cgccgggagc acctgagcgg ctttcgatcg
     5941 tcgtcgataa gccgaacctg gcatcggtgc cgccggccgg gccgctcgcc aaagccgagc
     6001 atatggaatt tcacgcacgt tttgcggccg aatcgacgcc ggggcatgcg gtgctcgatc
     6061 tcggggtcga tgttagaaac gcaaccgctc ccgcactcgt cgcctggctt gggactttcg
     6121 ggccgctggc gtcggcttcc actgatctgt ctttcgtggc ggtgctgcgc ggggcttcgg
     6181 acctcgcgcc
//
LOCUS       DATILV010000276         2082 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1853801, whole genome shotgun sequence.
ACCESSION   DATILV010000276 DATILV010000000
VERSION     DATILV010000276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2082
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1853801"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..318)
                     /locus_tag="VLJ17_06325"
     CDS             complement(<1..318)
                     /locus_tag="VLJ17_06325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22629.1"
                     /translation="MDRSQQWLKFSIATLMFALAAFAQKAPVPNRLGLSVEADQRKQA
                     MSFSISTLLTRSLHEVFGENDPARRRAAIDEIFTEDCVFYEPSGRVYRGRDEIDRVAG
                     TLRA"
     gene            complement(471..2015)
                     /locus_tag="VLJ17_06330"
     CDS             complement(471..2015)
                     /locus_tag="VLJ17_06330"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSV22630.1"
                     /translation="MTNVSREQYDFIVVGAGAAGSVLAAELSASGAQVLVIESGGPDD
                     GPTILNPSVWFYNVGGPLDYHLPVTPSPRLNDRKFNMALGHVLGGGTSINAMVWMRGM
                     QRDYDRWADNGAKGWAFADVLPVFKSQEDWEGGANEWRGAGGPIHIRRPKDPHPTAPA
                     FIEAAREMGMPTLDDVNGPMRPGAGYINMNIAADGTRVSAVRAFLRPALSRPNLTLLL
                     NTNVVKLNFKGTRCLGVRLMTDGAVNDIAADKEVILAAGAIHSPKLLMLSGVGEAKAL
                     RSLGIDVVENLPGVGENLQDHVLVSGVVFKYKGKMPDRPADSNAVEAEAYLSSSPSGD
                     TDISLVLHQLPVVTPEVASHFGTPPPDTFTIAPALVQPTSKGSVRLASNNFEDAAVID
                     GNYLGTDHDFAAIVRAIEAARELGNQHAFDSLRESELIPGPKASAEEIRELARLASAS
                     FGHAVGTCKMGVDKLAVVDPELRVHGILGLRVADASVMPQIITGPGTNASTHMIAGRA
                     AKVILG"
BASE COUNT          412 a          623 c          607 g          440 t
ORIGIN      
        1 ggccctgagc gtgcccgcga cgcgatcgat ctcgtcgcgg ccacggtaaa cgcgcccgct
       61 gggctcgtag aacacgcaat cttcggtgaa gatctcgtcg atggccgcgc gccgacgcgc
      121 cggatcgttt tcaccgaaga cctcatgaag actgcgggtt agcaaggtcg atatactaaa
      181 ggacatggct tgtttcctct ggtctgcctc aacgcttaaa cccaggcgat tcggaacagg
      241 tgctttctgc gcaaacgcgg cgagagcgaa cataagagtc gctatcgaga atttcagcca
      301 ctgctgcgag cgatccactg acaaatctcc tttcgcgaac gattgaatgc aaccgtggga
      361 ggcgggacgc gttgcctccg agaatggcgc gcctctccga atcattcaat tcagatcttt
      421 tcaagatccg tttcttcacg ttttacggcc agtcatgcga tcccctgttt tcagccgaga
      481 atcaccttgg cggcgcggcc cgcaatcatg tgggtcgacg cgtttgtccc cggcccggta
      541 atgatttgtg gcatcacgga ggcgtccgcc acgcgtaaac ccaaaatgcc gtgcacgcga
      601 agttctgggt cgacaacagc gagcttgtcc acgcccattt tgcacgtacc aacggcgtgt
      661 ccaaaacttg ccgaggcaag tcgggcaagt tctcggatct cctcggcgct cgccttgggc
      721 cctggaatga gttcgctctc gcgcaaactg tcgaaggcat gctgatttcc aagttcacgc
      781 gcggcttcga tggcgcgcac gatggccgca aaatcgtgat ccgtgccgag atagttgcca
      841 tcgatcacag cggcatcctc aaagttgttg ctcgccaggc ggacggaacc tttgcttgtg
      901 ggctgcacaa gagctggcgc gattgtgaac gtatccggtg gaggagttcc aaagtgcgag
      961 gctacctcgg gtgtaaccac cggcagttga tgaagcacaa gactgatgtc tgtgtcaccc
     1021 gaagggctgc tcgacaagta agcctctgcc tcgacggcgt tgctgtcggc cggccgatcc
     1081 ggcatcttgc ctttgtactt gaacacgaca ccggacacga gcacatggtc ctgcagattt
     1141 tcgccaacgc cgggcagatt ttcgacgacg tcgattccca gactgcgaag cgccttcgct
     1201 tccccgacgc ctgagagcat cagaagcttg gggctatgga tggcgccagc agcaaggatc
     1261 acttccttgt cggccgcgat gtcatttacg gcgccatcgg tcattagcct gacacccagg
     1321 caacgagtgc ctttgaagtt cagcttcacc acgttggtgt tgaggagcag agtgaggttc
     1381 ggcctcgaca acgctgggcg gaggaaagcg cgaacagcgc ttacgcgagt cccatctgcg
     1441 gcgatgttca tgttgatgta accggcgccg gggcgcatcg ggccgttcac gtcatccaga
     1501 gtgggcatgc ccatctcgcg agcggcttca atgaaggcgg gcgctgttgg atgaggatct
     1561 tttggccggc ggatgtgtat ggggccaccg gcgccgcgcc attcattcgc gccgccttcc
     1621 caatcttcct ggctcttgaa gaccggaagg acgtcggcga aggcccaacc cttggctccg
     1681 ttatctgccc accggtcgta gtcccgttgc ataccgcgca tccacaccat ggcattgatg
     1741 ctggtgccgc caccaagtac gtggccgagg gccatattga acttgcgatc gttcaatcgt
     1801 ggcgaagggg tgacgggcag gtggtaatcg agggggccgc cgacattgta aaaccagacg
     1861 cttgggttca agatggtcgg cccgtcgtct ggtccccccg actcgatgac caggacttgc
     1921 gcgccggacg cggacaattc agccgccagg accgaaccgg ccgcgcctgc tcccaccacg
     1981 atgaagtcat attgttctct cgatacgttg gtcattttaa actcccgcga tttaaaatct
     2041 gatttcttcg atagccgcct cgaaggcccc acccctatcg cg
//
LOCUS       DATILV010000277         6414 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3642214, whole genome shotgun sequence.
ACCESSION   DATILV010000277 DATILV010000000
VERSION     DATILV010000277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6414
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3642214"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1416
                     /locus_tag="VLJ17_06335"
     CDS             <1..1416
                     /locus_tag="VLJ17_06335"
                     /inference="COORDINATES: protein motif:HMM:NF025063.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
                     /protein_id="HSV22631.1"
                     /translation="GEFVNPRKNGSGASSLVSCRHRATVRSMIHLLILAVHLLATIAN
                     LLRPGGVRAVVAESLLLKHQLVIISRARQRAPNLNSCDRFVLGLGSLFVPARRFSKLA
                     VVLKPRTLLRFHEALKKRKYRRLFSSGGRRRPGPKGPSKELIDAIVEVKRRNPRIGCP
                     RIAQEIARTFGIDIDKDVVRRVLAKHHRPGAGTDGPSWLSFIGQMKDSLWSVDLFRCE
                     SILLRSHWVMVVMDVFTRRIIGFGVERAEPCGASICRMFNQIIAAKSLPRHLSSDHDP
                     LYGFHRWLANLRILEVEEIKSIPFVPVSHPFVERLIGTIRREFLDHVLIWNAIDLGRK
                     LEEFRNYYNENRVHQSLSGRTPGERSGQPPPAHAVLDHYAYGTIAAVYSRCQSQRDLR
                     IRHGQALPAGQIFRRLPTSRPVGRTHAGRVGVVGEDPQTRAGECGLSALTSDKRSASL
                     VGRAGGHGSARRGLRHGEEHR"
     gene            complement(1339..2646)
                     /locus_tag="VLJ17_06340"
     CDS             complement(1339..2646)
                     /locus_tag="VLJ17_06340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020180247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV22632.1"
                     /translation="MTRTVGSHPGISYRSMMVASFSTIVEWYDFTLYFYLATVLSRVF
                     FGGGEASLVTTLAGFAVAYLMRPLGAVVFGHFGDRFGRRPTMLLSLAIMAAAMLITGL
                     LPTHAQIGPAAGWLLLLLRCVMGFSVGGEYTGVVAYLLEGAREDQRGLITSSASAASE
                     IGALLAVGVAAVAVHSMSAANLDSWGWRIPFLIGAALAASVWIARSTMEESPDFKRQE
                     ATGTVPTNPLRYTLTHNREGILRGFAISALGSITYYVGITYVPVFLTSAGRLAENESL
                     WLATIAAVVVILVTPLTGALSDRLGRKPVLALVTGCSAVLPITMFSLMASGSKLQALL
                     GAVVLAGVGGGVSAVGAVATAEQFPGEGRLSGLALGATTATAIFGGLTPYVAQVLIHR
                     TGWPMVPGAMIAVVAVCVLPVFLTMPETAPGRSVTASTSHKTS"
     gene            2917..3120
                     /locus_tag="VLJ17_06345"
     CDS             2917..3120
                     /locus_tag="VLJ17_06345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapB family
                     antitoxin"
                     /protein_id="HSV22633.1"
                     /translation="MRTNIEIDDTLMAEAQKASGHATKKQTVEQALRLMIRLRRQQEV
                     NMAFGKYRWRGNLARSRKGRGTG"
     gene            3117..3518
                     /locus_tag="VLJ17_06350"
     CDS             3117..3518
                     /locus_tag="VLJ17_06350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain nuclease"
                     /protein_id="HSV22634.1"
                     /translation="MIVVDSSVWIDFLNGRGAPHVRHLQAVLGTDEIIVGDLMLCEVL
                     QGLESERAAREVEALLRRFEIASMAGDAIAVAAARNFRSLRRRGITVRKTIDLLIGTW
                     CIENRRPLLHNDSDFHPMARHLGLIEVPVTA"
     gene            3585..3701
                     /locus_tag="VLJ17_06355"
                     /pseudo
     CDS             3585..3701
                     /locus_tag="VLJ17_06355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011239024.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
     gene            complement(3838..4650)
                     /locus_tag="VLJ17_06360"
     CDS             complement(3838..4650)
                     /locus_tag="VLJ17_06360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22635.1"
                     /translation="MRKRGLCTVFALALGSLSSAPALSAGPTGWGDFSCLAITAFPAN
                     ISSPGVYCLSYKYIDFPMTDKFNPGVVGNISALIYITSDNVVLDLNGTTLDGTPPDPA
                     TAGITYGVFAYNNKTNIIRNVTVRNGTIKGFGVGVSLYGIGIPGDRSDIRPSSGHLVE
                     SIRALGNRSIGIEVIGHDSVIRGNYVAGTALGGHGIRAVGAGAHVVDNDIHNTNIGID
                     MESFGSGIAANNRISHASFGISGSGVWGKYRDNITTEVTSPYTGGTNIGNNN"
     gene            5042..5824
                     /locus_tag="VLJ17_06365"
     CDS             5042..5824
                     /locus_tag="VLJ17_06365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein"
                     /protein_id="HSV22636.1"
                     /translation="MSVRTWLILTSTWSERATPAPATAAAYNWSGWYAGLNAGGAWGH
                     SDASAATVFSPTGYFAATSVLAIAWAGQQTDNTVGFTAGGQVGYNWQWSSAVFGLEAD
                     FEYFRQKGSASSTALYPCCAPTAFTINSSVTTDWLFTLRPRLGWAANNWLFYVTGGLA
                     VTELKGDFTFTDTFATALETASVSKTKAGWTVGGGVEAGLWSNWTAKLEYLYVDFGSV
                     GTTSTNLTAFTPPIAFPTSVFTHSVDLRSNIVRAGLNYKFAP"
BASE COUNT         1278 a         1945 c         1971 g         1220 t
ORIGIN      
        1 ggcgaattcg taaatcctcg gaaaaacggc agcggcgcga gcagtcttgt gagctgccga
       61 catcgtgcta ccgtccggtc gatgattcac ctgctcatac tcgccgtaca cttgctggcc
      121 accattgcca acctcctgcg cccgggcgga gtacgcgccg tcgtggccga atccttgttg
      181 ctaaagcacc agttggtcat catcagccgc gcgcggcagc gagccccgaa cttgaattcg
      241 tgcgatcgat tcgttttggg tcttggatca ctgttcgttc cggcacgccg gttttcaaag
      301 ctcgcggtcg tcctgaagcc cagaaccttg ttgagattcc acgaggcact caagaaacgc
      361 aaatatcgcc ggcttttctc atcgggtggt cgtcggcgcc ccggcccaaa agggccatcg
      421 aaggaactca tcgacgcgat cgtcgaggtc aagcgacgca atccccgtat tggctgtcct
      481 cgcatcgcac aggagattgc gcggaccttt ggcatcgata tcgacaaaga cgttgtccgc
      541 cgcgtgctcg cgaagcacca tcgacctgga gcaggaacag atggtccgtc ctggctgagc
      601 tttatcggcc aaatgaagga cagcctgtgg agcgtcgatt tgtttcgctg cgaatcgata
      661 ctcttgcgca gccattgggt catggtggtg atggacgtgt tcacacgtcg gatcatcggc
      721 tttggcgttg agcgcgccga gccctgtggc gcgtcgattt gccggatgtt caaccagatc
      781 atcgccgcaa agtcgcttcc tcggcacctg agttccgacc acgacccatt atatggtttc
      841 catcgttggc tcgccaattt gcgcatactt gaggtcgaag agattaagtc gattccgttc
      901 gtacccgtgt cccatccgtt cgtggaacgg ctgatcggga cgatacgacg ggagtttctt
      961 gaccacgtgc tgatctggaa cgcaatcgac ctggggcgaa agttggaaga gttcagaaat
     1021 tattacaatg aaaatcgcgt tcaccagtcc ctcagcggcc gcactccggg agaacgatct
     1081 ggccaaccgc cgcccgccca tgccgtcctc gaccactacg cgtacggcac cattgccgcg
     1141 gtctattcca gatgccaatc gcagcgtgat ttacgaattc gccatggaca ggctcttcca
     1201 gcagggcaaa tctttcgacg actacccaca tctcgcccag tcggcaggac ccatgctgga
     1261 cgagttggcg tggtgggcga agatcctcaa acccgcgcgg gagaatgcgg cttgagtgcg
     1321 ctcacgtcag acaaacggtc agctagtctt gtgggacgtg ctggcggtca cggatctgcc
     1381 aggcgcggtc tccggcatgg tgaggaacac cggtagcacg cacacggcca ccacggcgat
     1441 catcgcgcca gggaccattg gccagccggt gcggtgaatc aggacttgag cgacgtatgg
     1501 cgtgagtccg ccgaagatcg cagtggccgt tgtcgcgcct agagccaaac cactaagacg
     1561 cccttcaccg ggaaactgtt cggccgttgc tacggcaccg acagcgctga cgccgccccc
     1621 tacaccagcc aaaacgacgg cccctaacaa tgcttggagc ttggagccac tggccatcag
     1681 cgaaaacatc gtgatcggca gcacggcgct gcagccggtc acgagcgcta gtaccggctt
     1741 ccggcccagc cgatccgaca gtgctccggt caatggcgtc acgaggatca ccacgacggc
     1801 tgcaatcgtc gccaaccaga gcgactcgtt ctcggcaagc ctcccggctg aggtgaggaa
     1861 aactgggaca taggtgatcc cgacatagta ggtgatcgat cccaatgccg agatggcgaa
     1921 acctcgcaat atgccttcgc gattgtgggt gagcgtgtag cgcagaggat tcgtgggcac
     1981 cgttccggtc gcttcttgtc gtttgaagtc cggcgactcc tccatggttg agcgagcgat
     2041 ccaaacgctc gccgccagcg ccgcgccgat caggaaggga atgcgccatc cccacgagtc
     2101 aaggttggcc gcgctcatcg aatgcacggc cacagcagca acgccgacgg cgagcagcgc
     2161 cccgatctcg ctcgcggccg atgccgacga ggtgatcagc ccgcgctggt cctcccgtgc
     2221 gccctccagc aggtacgcga ccactccagt gtactcgcct ccgacggaga agcccatcac
     2281 gcagcggagg aggagcagca gccagccggc ggcaggaccg atctgagcgt gagtcggcag
     2341 gagcccggta atcaacatgg cagccgccat gatggcgagc gacaggagca ttgttggacg
     2401 ccgcccgaac cgatctccaa agtgtccaaa cacaacagcg cctagtggac gcatcaggta
     2461 ggccaccgcg aagcccgcca gcgttgtgac caacgaggcc tcgcccccac cgaagaacac
     2521 cctcgagagc accgtggcga gatagaaata cagggtgaag tcgtaccatt ccacgatcgt
     2581 cgaaaaggac gcgaccatca tcgagcgata cgaaatcccc ggatgtgatc cgacggtgcg
     2641 cgtcatctcg gaacgtgctc cattgggcga agggcaatga gctcgagttc cggggaggtg
     2701 cggcatcgga ggcgcaaagc gaggatgcaa atgacggtgg tgagaatcgt gatcatgccc
     2761 acaacggtac ggatatggcg ctaaaatctc tcggctctct ccacctttcg gagttttgag
     2821 catggaccgg acgggcgtga ctaatcacgc cggccattgc gggatggcaa tgtgtattgt
     2881 atcatttgat atacacattg caatggagcg ccgccgatgc gcaccaatat cgagatcgat
     2941 gatacgctaa tggcagaagc ccagaaagct tccggacacg caaccaagaa gcagacggta
     3001 gaacaggcgc tccgtttgat gatcaggctg cgacggcagc aggaggtcaa catggctttc
     3061 ggcaaatacc gctggcgcgg caacctcgcc cggagccgca aagggcgagg aactgggtga
     3121 tcgttgtcga cagtagcgtc tggatcgact tcctcaatgg ccgcggtgct ccccatgtcc
     3181 ggcacctgca agcggtcctc ggcacggacg agatcatcgt tggggatctg atgctttgcg
     3241 aggtcctgca aggcctagag agcgaacggg cggctcgaga agtcgaggct ctgctgcgcc
     3301 gcttcgaaat tgcgtccatg gccggcgacg cgattgccgt cgcagcggcc cgcaatttcc
     3361 gttccttgcg caggcgcggc atcaccgtgc gcaagaccat cgatttgctg atcggcactt
     3421 ggtgtatcga gaaccgcagg ccgctgctcc acaacgacag cgattttcat ccgatggcgc
     3481 ggcatctggg gctgatcgag gtgccggtga cggcgtgaca gcgcaagctt tgcgggaatc
     3541 ggcggcacga caagctgccg aatcgaattc atctcatcga ggaccgtccg ccgcgggcgt
     3601 cggcgaccct gcagctgttg gccggcgaga tggtcaagct caccgagcac gacggcatct
     3661 cgcgcgagac cgtgcgccgg cgattggccg aaaatcacct gtccctggcg aattcgtaaa
     3721 tcacgctgcg attggcatct ggaatagacc gcggcaacgc gtagtggtcg aggacggcat
     3781 ggccgcgccg ctccgttttt tgcgaggatt tacgaattcg ccatggacag gtgctgatca
     3841 gttgttgttt ccgatgttgg tgcctccggt atagggcgaa gtcacctccg tggtgatgtt
     3901 gtcccgatac ttcccccaga cgcccgatcc cgatatgccg aagctggcgt gggagatacg
     3961 attgtttgcg gcgatgccgc tgccgaagga ttccatatcg atgccgatgt tggtgttatg
     4021 gatgtcgttg tccacgacgt gcgcgcccgc tcccacggcg cgaatgccgt gaccgccgag
     4081 agctgtgccc gccacgtagt tgccccggat cacggagtcg tgcccgatca cctcgatccc
     4141 gatgctcctg ttcccgagag cgcggatgct ctccaccagg tggccgctgc tgggccgtat
     4201 gtcggaccgg tcccccggga tgccgatgcc gtacagggac acgccgacgc cgaagccctt
     4261 gatggtaccg ttgcgcacgg tgacgttcct tatgatgttc gttttgttgt tgtaggcgaa
     4321 gacgccgtac gtgattccgg cggttgccgg atcggggggc gtcccgtcca gggtggttcc
     4381 gttcagatcc aggacgacgt tgtccgaagt gatgtagatg agagcggaga tgttgccgac
     4441 gacgccagga ttgaatttgt cggtcatggg gaaatcgatg tacttgtagc tcaggcagta
     4501 cacaccgggg gacgagatgt tggccgggaa ggccgtgatg gccaggcagg aaaagtcgcc
     4561 ccagccggtg ggcccggccg acagcgccgg agcggaggac agactgccca aggcgagcgc
     4621 gaaaacagtg cacagaccgc gtttcctcat gtttgtctcc tgggagggac cggacggcct
     4681 tgatcctagg ccgtgatgtc gccggcatcg gccggcaggg tttgaatgtg gctttgccca
     4741 gagatcgagc gccgcgcgct tctccgcagt gtagagcgaa cggttataga tgccagccac
     4801 gcccgctttc gcccgcccac gtgttcggtg accgacggcg agcccgctcg atagttggga
     4861 aatctgccgc aaccgattga tgcatcaagg ccggttttgc tccgacttgg gaaaaaaacg
     4921 tcatcaattc aacactgcac ggtggactct taatcagcgg gtccaaggtt cgagtccttg
     4981 cgcgcccacc aaactatcca ctcaaatgca atgggtagga gaggcaaggc gaggcaccgc
     5041 tgtgtccgtc cgaacctggc tgatcttgac gtccacctgg tccgagcgcg cgaccccggc
     5101 gccggccacc gccgctgctt acaactggtc cggatggtat gcaggcctga atgccggcgg
     5161 cgcctggggg cattccgacg caagcgcagc taccgtcttc agccctaccg gctatttcgc
     5221 cgcgaccagc gtactagcca tcgcgtgggc cggccaacaa acagacaaca cggtcggatt
     5281 caccgccggc ggtcaggtcg gctataattg gcaatggagc agcgccgtct tcgggctcga
     5341 ggctgacttt gagtacttcc gccagaaggg ttcagcctcc tctaccgcct tatacccttg
     5401 ctgcgctccg acggcattca cgatcaattc gtccgttaca accgactggc tgttcacgct
     5461 gcgtccgcgg ctcggctggg ccgccaataa ttggctgttt tacgtcaccg gcggccttgc
     5521 tgtgacggag ctgaaagggg acttcacctt taccgatacg ttcgcgacgg cgctcgaaac
     5581 cgcctcggtg tcgaagacca aggccggatg gacggttggc ggcggtgtcg aggcggggtt
     5641 gtggagcaat tggaccgcca agctcgagta cctttacgtc gatttcggca gcgttgggac
     5701 cacctcgaca aatttgacgg ccttcacacc gcccatcgca ttcccgacga gtgtctttac
     5761 gcacagcgtc gatctgcgct cgaacatcgt ccgcgcaggc ctgaattata agttcgcacc
     5821 atgatcatcg gctgatcggc caggttcgat cgtccggccg gacgccaggc ggaggggctt
     5881 accccaggca cgcggactac ccccagctgc tacagggtct ggcgtggcgt gcctcgatcg
     5941 ccttggcgag aagctcgggc tgctcggcaa atgcgcgagc atcgttagac tcaagcagcc
     6001 gcagcatcgc cgcctgtcgg cggtgctgct ccgggggtca tgagaaagtc ggcgttcatc
     6061 acccctccgt taagccggtc ggcaccctcg atgaacgctt gtgcgtctga gggcccgctc
     6121 gcatcgcgat cagcgttgcc gacagaagag tctgtgccat cagcgtcatg cgtcaccaat
     6181 cttgtccggg aaggacagga tctcaggcgc aaggctgact ttgttgagag acgtttgacc
     6241 agcgggcacc gagcgagcga cacatccagc gtacgcgcct ctctctcgag gccattgcga
     6301 gcgggacggt ccagagccaa agccccacga ccggggcaag gcaaagcttg gaacccgcag
     6361 cggacgcccg gcgggttctt catttgcaaa ttggaaacgg ctgcgctctc acca
//
LOCUS       DATILV010000278         2741 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3386177, whole genome shotgun sequence.
ACCESSION   DATILV010000278 DATILV010000000
VERSION     DATILV010000278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2741)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2741)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2741
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3386177"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1614)
                     /locus_tag="VLJ17_06370"
     CDS             complement(<1..1614)
                     /locus_tag="VLJ17_06370"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HSV22637.1"
                     /translation="MSAIGKPISRFDGRLKVTGTAHYTADIAITGALQAALVSSTIAN
                     GRIASLDTSAAENAPGVVAVFTHRNTPRMNPTPKPWSHLHPHGQSYLPLQDDQILYAD
                     QPIALVVAAARDQATYAGTLIRVDYEVKPPVVFGPQSAKDAVDPPQFLWPVASSVGDA
                     NTAIATAEVRIDQTYTTTDRHHNPMEPHATTAIWDADGALTLYETTQHIFGARELVSI
                     VLGVPISKINVVSHFVGGGFGCKGYVWPHTLLAALAAKVLNRPVHIQLSRAQMYSMTG
                     YQPASIQTIALGSRKDGKLTGIRHDSITPTSMFDNYIEYAALCPRSLWNASGGISTNH
                     KIVHVNHNTPTPLRAPHEALGHFALECALDELAYETGVDPVTLRLRNDTETDPHTGRP
                     FSTRAMRKCLTEGAVRFGWEKRRPEPRSMRDGRYLIGQGMAGAIYTHWRWPAQARVTI
                     NRDGSVLVEAGTHDLGTGTYTILQQVAADTLGLPTEKVTVRLGDTRLPTSHASIGSAT
                     AANAGGSVMLAAKAARDKAIGLARTGWDAL"
     gene            complement(1611..2606)
                     /locus_tag="VLJ17_06375"
     CDS             complement(1611..2606)
                     /locus_tag="VLJ17_06375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012706538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HSV22638.1"
                     /translation="MHPFTLSRATNAVEAIKAHAEEPQLTFIAGGTDLIGLMKDRAIF
                     PGHLLDINGLPEMSSIEALPDGGLRVGALARMSDVAADIEVRRRFPVIAESLLFAASG
                     QLRNMASMGGNIMQRTRCAYFRDEDDLPCNKRRPGSGCSALHGINRNHAIFGWSDDCV
                     ATHPSDVAVAFAALDANVLVHGRSGERSIPFTEFHRLPGSTPERDNVLDRGDLIVAIE
                     VPARVEGRASYYLKLRERESYEFALVSAAAAVAIDDGRIKSVRLAMGGVAHKPWRLRT
                     AEAALHGALLQDLDTLKAAIATSFTDARPLAHNGFKVELAQRVALRALQVAGERA"
     gene            complement(2610..>2741)
                     /locus_tag="VLJ17_06380"
     CDS             complement(2610..>2741)
                     /locus_tag="VLJ17_06380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HSV22639.1"
                     /translation="VTKPFALTDLSDVEIRERMSGNLCRCSCYPNIVDAVAEAIQRR"
BASE COUNT          526 a          797 c          828 g          590 t
ORIGIN      
        1 gagggcgtcc cagcctgtcc gcgccaaacc aatcgcttta tcacgcgcgg ccttcgccgc
       61 gagcataacc gacccgcccg cattggctgc cgtggccgat ccgatcgatg cgtgcgatgt
      121 tggcaacctg gtgtcgccaa gccgcacagt tactttttcc gttggcagac cgagcgtgtc
      181 cgcagccacc tgctgcaaga tggtgtaggt cccggtgccg aggtcatgcg ttcctgcttc
      241 gaccaatacg gaaccgtcac ggtttattgt gacccgcgcc tgcgctggcc agcgccaatg
      301 ggtatatatc gcgcctgcca tcccctgtcc aatcaagtag cgcccgtcac gcatcgagcg
      361 tggctcgggc ctcctcttct cccatccaaa tcgcacagcg ccctccgtca ggcacttccg
      421 catggctcgt gtcgaaaaag gtcggccagt gtgtgggtcg gtctccgtgt cgttgcgcag
      481 gcgcagtgtg actggatcaa ctccggtttc atatgcaagt tcgtcgagcg cgcactcgag
      541 cgcgaaatgc ccgagggctt cgtggggggc gcggagcggt gtcggagtgt tgtggttgac
      601 atggacaatc ttgtgattcg ttgagatgcc cccgcttgca ttccaaagcg agcgtgggca
      661 gagcgccgca tactcaatgt agttgtcgaa catcgatgtc ggcgtaatgc tgtcatggcg
      721 gatgccagtc agctttccat cctttcgaga gcccagggca attgtctgaa tgctcgctgg
      781 ctggtaaccc gtcatcgaat acatctgggc acgagatagc tgaatgtgca caggtcggtt
      841 cagcaccttt gcggcgagag cggccagtag ggtatgcggc catacgtagc ccttgcagcc
      901 gaatccgcct cccacaaagt gcgagacaac gttgattttg gagatcggca cacccaacac
      961 tatcgacaca agttccctgg caccgaagat atgttgggtc gtttcataga gagtcagcgc
     1021 gccgtcggcg tcccagatgg ccgtagttgc gtggggctcc attggattgt ggtggcgatc
     1081 ggtcgtcgtg taggtctggt cgattcttac ctcggctgtt gcaatcgccg tgttggcatc
     1141 cccgactgac gaagcaacag gccaaagaaa ctgcggagga tcgacggcgt cctttgccga
     1201 ctgcggaccg aaaacgactg gcggtttgac ctcataatca accctgatca gagttccggc
     1261 gtaagtcgcc tgatcgcgcg cggcggccac cacgagtgcg atcggctggt cagcgtacag
     1321 aatctggtcg tcttgaagag ggagatacga ttgtccatgg ggatggaggt ggctccaagg
     1381 cttgggcgtc gggttcatcc gtggcgtgtt gcgatgcgtg aaaacagcta ccacgccggg
     1441 ggcattctca gcggccgaag tatcgagcga cgcgatacga ccgttcgcta tggtgctgct
     1501 gacaagcgcg gcttgtaacg cgcctgttat ggcgatatcc gctgtgtagt gcgccgtgcc
     1561 ggtcaccttc aggcgcccat cgaagcgaga gattggtttt ccgatggcgc tcatgcacgc
     1621 tctcctgcga cctgcagcgc tcgaagtgcg acacgttgcg caagttcaac cttgaaaccg
     1681 ttgtgagcca gcgggcgggc gtcggtgaag gaggttgcga ttgcggcttt gagtgtgtcc
     1741 aagtcctgga gtaatgcccc atgcaacgcc gcttccgccg ttcttaatcg ccacggtttg
     1801 tgtgccaccc ctcccatcgc taaacgcacc gacttgatgc gaccgtcatc aatcgcaacg
     1861 gcggcggctg cagatacaag ggcaaactcg tacgactcgc gctctcgaag cttgaggtaa
     1921 taagaggcgc gcccctcaac ccttgccggc acctcgattg ccacgatgag atcgccccga
     1981 tcgagtacgt tgtcccgctc gggagtgctc cctggcagac gatgaaattc agtgaacggg
     2041 attgatcgtt ctccactgcg cccgtgtacg aggacatttg catccaaggc ggcaaaagct
     2101 accgcaacgt cggagggatg ggttgcgacg cagtcgtccg accatccgaa gatcgcgtgg
     2161 ttgcgattta tgccgtggag agccgagcag ccggagcccg gccgcctctt gttgcagggg
     2221 aggtcatctt cgtcgcggaa gtaggcacag cgggtgcgct gcatgatgtt gccgcccatc
     2281 gaggccatgt ttcggagttg gccggatgcc gcaaacaaca ggctctctgc gatcaccgga
     2341 aaacggcgtc gtacctctat gtccgccgca acatcgctca ttcttgcgag cgcgccgacg
     2401 cgcagccctc catctggtaa ggcttcaata ctcgacatct caggcagacc gttgatgtcc
     2461 aacagatgcc cgggaaatat tgcgcgatcc ttcatcaagc cgatgaggtc agtaccgccc
     2521 gcgatgaaag taagctgtgg ttcttcggcg tgagccttga ttgcttccac tgcgttcgtc
     2581 gctcgtgaga gtgtgaaggg atgcatactt caccttcttt gtattgcttc cgctaccgcg
     2641 tccacgatgt tagggtagca agagcaacgg cagagattgc cgctcatgcg ctcgcgaatc
     2701 tccacgtccg aaagatcggt gagagcgaat ggcttcgtaa c
//
LOCUS       DATILV010000279         3838 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1344194, whole genome shotgun sequence.
ACCESSION   DATILV010000279 DATILV010000000
VERSION     DATILV010000279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3838)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3838)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3838
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1344194"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..729)
                     /locus_tag="VLJ17_06385"
     CDS             complement(<1..729)
                     /locus_tag="VLJ17_06385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22640.1"
                     /translation="MNHLSLPNTLSRFLDIRPGEARRVGIMVSLLFFLLAANNVIKVV
                     RDSLFLSRFPISYLAHVYLLAAVLAGVIIAVYTRYTVRVPLYRLILASNAFIVCNVIM
                     FWFLIVFFNFAWAIFAFYIWSAIVGVLAVAQFWTLAGLIFTSREAKRLFGIFNAGGSL
                     GAILGGFGSGWAVNMMRSHELLWLIGALFAGAFAVVWLAGSKLSELQTVGLTEVPASK
                     ETNASQQTSALGAIRASRYLQLIAG"
     gene            complement(1177..2142)
                     /gene="panE"
                     /locus_tag="VLJ17_06390"
     CDS             complement(1177..2142)
                     /gene="panE"
                     /locus_tag="VLJ17_06390"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007568257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008677 - 2-dehydropantoate 2-reductase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HSV22641.1"
                     /translation="MRILVVGAGAVGGYFGGRLLEAGCNVTFLVRPKRAAQLAETGLV
                     VKSRFGDVILKVPPTVQANKIDRHFDLVLLSCKAYDLDAAIDSFTAAVGPETAILPLL
                     NGMRHLDVLDERFGAAQVLGGQCLIAATLDDSGRIVHFNDSHLLTFGERDGNRSPRID
                     AILQEMSRANFESRASSVILLEMWEKWVFLATLAGITCLMRSAIGDIAAAGAAHLALE
                     LLEECRSIAARKGFTPRPEFLERTRSAVTEPGSPLTASMLRDMERGARIEADHILGDL
                     LRRGSQVLNADRSLLQLAYRHLKTYEARRDREKVAGENARLKHSA"
     gene            complement(2198..3628)
                     /locus_tag="VLJ17_06395"
     CDS             complement(2198..3628)
                     /locus_tag="VLJ17_06395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007767542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HSV22642.1"
                     /translation="MITAARREAVVAAPIVGPLSADVDSRTGALLRGAIVPTLLRLAW
                     PNILVMLAQASTGLIETWWVSRLGTNALAGMALVFPVVMLMQMVSAGAMGGGISSAVA
                     RALGAGRRDEADALVLHAVIVNVALGAFFSIVMLVFGPSIYRALGGTEGELQTALSYS
                     NVVFAGNILLWLMNALASVIRGTGNMLVPAMVISAGVIVLVPLSPCLIFGVGPFPELG
                     VAGAGLAVVLFYAAGTAVLLWYIFAGRNVVRFRLTRLRWPLFRDILAVGAVAAVTSLQ
                     TNVTIALATALVASAAGTDAVAGYGTGVRLEYLLIPLIFGLGAPLVALVGTNIGAGQK
                     QRALRIALVGGAIAFAISSTLGLIAALWPQAWLALFSPDPRVIETGSAYLRIVGPTYG
                     FFGLGMALYFASQGAARLLWPLLTGFLRVIVAIGGGWLALRLTGSLNWLFAALALGLI
                     VYGVTLTAAIISGAWFGRERTIKARG"
BASE COUNT          894 a         1155 c         1090 g          699 t
ORIGIN      
        1 gccggcaatt aactgaagat atcgggacgc tcggatcgcg cccagcgcac tagtttgttg
       61 gctcgcgttc gtttcttttg atgccgggac ttccgtcagc cctaccgttt ggagctcgct
      121 taatttgctg cccgccaacc aaaccaccgc aaaagcaccg gcaaacagcg ctccgatcag
      181 ccagagaagc tcgtggcttc tcatcatgtt aactgcccat ccactcccaa agccacccag
      241 gatagctccg agtgaaccgc cggcgttgaa aatgccgaac agacgtttgg cctcccgtga
      301 agtgaaaatc aaaccggcaa gcgtccaaaa ttgagccaca gcaagaacac cgacgattgc
      361 ggaccagatg taaaaggcga atatcgccca ggcaaaattg aaaaacacga taagaaacca
      421 gaacatgatc acattgcata cgatgaaggc gttcgaggct agaatgagcc ggtagagcgg
      481 aaccctaacc gtgtaacgcg tgtaaacagc gatgatgact cccgcaagaa cggcggccaa
      541 gaggtaaacg tgtgccagat aactgatggg aaagcggctg agaaagagag agtcccttac
      601 aactttgatg acgttattgg cggccagcag aaaaaaaagc agggagacca taatgccgac
      661 acgccgggcc tcaccgggtc ggatgtcaag aaagcgcgac aaagtgtttg gcagagagag
      721 gtgattcata aaaactaatt gtattgctaa tttatagaga cgttaacacc acgctccttc
      781 cttggtgcct cataaatcaa ggtagatcct ccacattagg ggtatttcga cgtgcgcatc
      841 atttctccgc atccgcggga gcacggtgat cctccaagtg tccaatcccg aaactacgag
      901 ctgtaacacg tagatggcgt ctaccgttca tggttcgagt gcctcaccac gaacgccttc
      961 tgcccttgac cgatcaccct gagctcgtcg aagggttctt cgaacttggg tgcgaaacaa
     1021 ttgttacagt ccactagtag ctcgcagtag tgatttttgg ggttaacgtg atcgggctcg
     1081 tgatggagct gcaccggtgg tacgcggccc accgacgccg tctagtggat cacattgatc
     1141 cgcatctcat tagactcgtg agctatcgat gatcgcctaa gctgagtgtt taagacgagc
     1201 attctctccg gccacttttt cacgatcgcg ccgagcctca tatgtcttca gatgcctata
     1261 ggccaactgc agcagcgagc gatcagcgtt tagcacttgg ctgccgcggc gaaggaggtc
     1321 gccgagtatg tgatccgcct cgatccgggc gccgcgctcc atatcacgca gcatggatgc
     1381 agtgagaggg gagcccggtt ccgtcaccgc gctgcgcgtt cgttcaagaa attcaggtcg
     1441 cggtgtaaaa cccttcctgg cagcaataga ccggcactcc tccagaagct cgagtgccag
     1501 atgcgctgcg ccagccgctg cgatgtctcc gattgcgcta cgcatgaggc aggtgatccc
     1561 cgccagcgtc gcaaggaata cccatttttc ccacatctcg aggaggatga cggaactcgc
     1621 gcgtgattcg aaattcgccc ggctcatttc ctggaggata gcgtcaatgc gcggcgagcg
     1681 gtttccatcg cgctcgccga aggtcaatag gtgcgaatcg ttaaaatgca caatgcggcc
     1741 gctgtcatcg agcgtcgccg cgatcagaca ttggccgccc agaacctgtg ccgcgccaaa
     1801 ccgctcgtcg aggacgtcga ggtgccgcat gccattcaag aggggcagga tcgccgtttc
     1861 cggtccaacc gctgcggtaa aagaatcgat ggcggcatcg aggtcgtagg ctttgcagct
     1921 caacaaaacc aggtcgaagt gccggtctat tttattagcc tgaacggtcg gcggcacttt
     1981 aagtatcaca tcgccaaaac ggctcttgac cacaagaccc gtttcagcga gttgagcagc
     2041 ccgcttcggc cggacgagaa aggtgacatt gcaaccggct tctagcaatc ggccgccaaa
     2101 gtatccaccg accgcaccgg cgccgacgac gagaattctc ataactgttc cccttgtttg
     2161 ctcgttgcca cttcaataca agcatgtgtc atcaaagcta accgcgcgcc tttatagttc
     2221 gctctcgacc aaaccacgct cctgatatga tcgctgccgt aagcgtgaca ccgtagacga
     2281 tcagccctaa ggcgagcgct gcgaatagcc agttgaggga gccggtcagg cgaagcgcaa
     2341 gccagccgcc gccgatcgcg actatgacgc ggaggaatcc cgtcaacaga ggccacaaaa
     2401 gtcgcgcggc gccctgggat gcgaaataga gcgccatgcc caggccaaag aatccatatg
     2461 tcggcccgac gatccgcaga taagcgctgc cggtctcgat cacgcgggga tcgggactga
     2521 atagcgcaag ccacgcctgc ggccagagcg ctgcgatcag cccgagcgtt gagctgatcg
     2581 caaaggcgat ggcgccgccg accaacgcga tgcggagcgc tctttgtttt tggccggcgc
     2641 cgatgttggt ccccacaagc gccaccagcg gcgcgcccaa gccgaagatc aagggtatca
     2701 gcagatattc caggcgcacg ccggtgccgt agccggcgac ggcgtcagtc ccggcggcgc
     2761 ttgcaactaa cgctgtggcg agcgcgatcg tcacgttggt ctgtagcgag gtgaccgcag
     2821 cgaccgcgcc caccgccaaa atatcgcgaa acagcggcca gcgaagacgc gtcaaccgga
     2881 aacgtacgac gttgcgtcct gcaaagatgt accagaggag aaccgcggtt cccgcggcat
     2941 agaaaaggac aactgccaac cctgctccgg ccacgccaag ctccgggaaa ggaccgactc
     3001 cgaaaatcaa acaaggcgag agcggcacga gaacaatcac gcccgcagag atcaccatcg
     3061 ccggcaccag catgttgccc gtgccacgga tcacgctcgc cagcgcgttc atgagccaga
     3121 gtaagatatt gccggcgaag accacgttgg agtagctgag cgccgtttgt aattcgcctt
     3181 ccgtcccacc caatgcgcgg tagatcgacg gtccgaatac gagcatgacg atcgagaaga
     3241 aagcgcccag cgcgacgttg acgataaccg catgtagtac cagcgcgtcg gcttcgtcgc
     3301 ggcgcccggc tcccaatgcc cgcgcaaccg cggaagagat gccgccgccc atagctccgg
     3361 cggaaaccat ctgcatcaac atgaccacgg gaaataccag cgccatgccc gccagcgcgt
     3421 tcgtgccgag acgcgagacc caccaggttt cgatcagccc ggtggaagcc tgggccagca
     3481 tgaccaggat attgggccaa gcgagacgca gcagcgtcgg aacgatggcc ccgcgcaaca
     3541 gcgcgcccgt gcgtgagtcg acgtcagccg atagcggccc gacgatggga gcggcgacta
     3601 cggcctcgcg tcgtgctgcg gtaatcatga cgccctgcgc tttctggcgc ccgccgtctt
     3661 cgaagacttc cgagcgtcca gagttttctt ttgattgatc attgcgtatc ggcggcgtgt
     3721 acgctcgctg gcggcagggc cggcggcaaa cacaaagtcg cgctcgttaa gcggtcttcc
     3781 gctccgccga tcgactagca cgggatccgc cgccctgtgc gtctttttgt cgacgagc
//
LOCUS       DATILV010000280         2084 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_575409, whole genome shotgun sequence.
ACCESSION   DATILV010000280 DATILV010000000
VERSION     DATILV010000280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2084
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_575409"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            126..998
                     /locus_tag="VLJ17_06400"
     CDS             126..998
                     /locus_tag="VLJ17_06400"
                     /inference="COORDINATES: protein motif:HMM:NF016236.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HSV22643.1"
                     /translation="MVITFRLLTFSLLGVAMMLAIGCAGKTGTVQPQGLSDARPAADS
                     TPAPASSPETQSDEPLDPFARAYEGVGEEYDPWEPMNANMFEFNRQVDRFVLKPVAKG
                     YDFVLPDLVQVGISNIFYNLRFAPRFLNNVFQGKLKGAGIEVGRFLINSTVGLAGFFD
                     LAKHVDLVTSEEDMGQTLGFYGVKPGPYLVLPLLPPFTVRDFAGFVGDVFLNPINWLV
                     VPIIEVDGVPSVIAHKNRMTSTLIQTGSRVGEVVNERSRNLEKFQGVEEATLDLYTAV
                     RNAYLQKRAQAIRE"
     gene            complement(1093..>2084)
                     /locus_tag="VLJ17_06405"
     CDS             complement(1093..>2084)
                     /locus_tag="VLJ17_06405"
                     /EC_number="2.3.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013532322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008890 - glycine C-acetyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycine C-acetyltransferase"
                     /protein_id="HSV22644.1"
                     /translation="GLQEHGYGMASVRFICGTQDLHKQLEQAISTFLGTEDTILYSSC
                     FDANGGLFEVLLGEQDAVISDALNHASLIDGIRLCKATRLRYTHSDMADLEAKLLDAT
                     SYRLRLIATDGVFSMDGDLAKLDRIVELADRYDAAVIVDDSHATGVLGRNGRGTPDHF
                     GVAGRIEIVTSTLGKTLGGAAGGFTSGRKEIVELLRQRSRPYLFSNSLPPVIAAAARR
                     AVVLVAQGDQLRAKLRENAAFFRAQLTALGFRLIPGEHPIIPIMLGDASLATRIAERL
                     LEEGIYVVGFSYPVVPEGQARIRVQMSAAHTQEQLERASAAFATVGRELGIIP"
BASE COUNT          409 a          598 c          643 g          434 t
ORIGIN      
        1 gacgggcaag atgggtgggg acttcgagtc gcgcttttcc cgcctgtctc gcccgtctcg
       61 cttgagtcag gcatcggcga ttgcagcaga cgcgttcatg aatgatgcgg gttaaggagg
      121 ccgggatggt gattaccttt cgtctgctga cgttcagtct gctgggtgtc gcgatgatgc
      181 ttgccattgg ctgcgcagga aaaaccggca cagtgcagcc acaggggttg agtgacgcga
      241 ggccagccgc ggattcgact ccggcgcccg cgtcgtcgcc agagactcaa tcggacgagc
      301 cgcttgaccc ctttgccagg gcctatgagg gagtcggtga ggaatatgat ccctgggaac
      361 cgatgaacgc caacatgttc gagttcaacc gccaggtcga tcgattcgta ctcaagccgg
      421 tggcaaaagg atatgatttc gtcctgcccg acctggttca ggtcggtatc agcaacatct
      481 tttacaatct ccggttcgct ccccgatttt tgaacaatgt gtttcaaggc aagctcaaag
      541 gcgccggcat cgaagtagga cggttcctga tcaatagcac ggtgggattg gccgggttct
      601 tcgacctcgc gaaacatgtt gaccttgtca catcggaaga agacatggga cagacgcttg
      661 gattctatgg cgtcaaacca ggcccctatc tcgtgttgcc gctgctccct cccttcaccg
      721 ttcgggattt tgcggggttt gtcggcgacg tgtttctcaa tccaatcaac tggttggtcg
      781 taccgatcat tgaagtcgac ggcgtccctt ccgtgatcgc acacaagaac cgtatgacgt
      841 cgaccttaat ccagactggg tctcgcgtgg gcgaggtcgt caatgaacgg tcgcggaatc
      901 tcgaaaagtt ccagggagtc gaggaagcga cattggatct ctataccgcc gtccgcaacg
      961 cctatctgca gaagcgtgcc caggcaatcc gggaataggg acgtgagggg tgaggggtga
     1021 ggcgtaaggt gataggaaac aagcgcttcg tccttgccga cctctcacgc ctcacgtttc
     1081 acgccttacg ccttacggga tgatacccag ttcccggccg actgtggcga aggcggcgct
     1141 ggcgcgctca agctgttcct gtgtgtgggc cgccgacatc tgcacacgaa ttcgtgcctg
     1201 gccttccggc acaacggggt aactgaaacc cacgacatag atcccttcct ccaacagccg
     1261 ctctgctatc ctggtagcga gtgaggcgtc gcccaacatg attgggataa tgggatgctc
     1321 accgggaatg agccggaacc cgagggcggt gagttgcgcg cggaagaagg ccgcgttctc
     1381 gcgcagcttg gcccgtaact ggtcgccttg ggccacgagg accactgccc gtcgagccgc
     1441 cgcggcgata accgggggaa gcgaattcga aaacaagtag ggtcgcgacc gctgccgcag
     1501 cagctcgacg atttcctttc gtccggaagt aaagccacca gccgcgccac ctaatgtctt
     1561 gcccagcgtg ctggtgacga tctcgattcg accggcgacg ccgaaatggt ccggcgtgcc
     1621 gcgcccgttg cgcccgagca caccggtcgc gtgactgtcg tccacgatca ccgcggcatc
     1681 gtatcgatcc gccagctcga cgatccgatc gagttttgcg agatcgccat ccatagagaa
     1741 gaccccgtcc gtcgcgatca ggcgaaggcg ataggatgtc gcgtcgagca gcttggcttc
     1801 caggtctgcc atatcggagt gcgtgtagcg gagcctggtg gccttacaga gccggatgcc
     1861 gtcaatcagg ctggcgtggt tcaaggcgtc gctgatgaca gcgtcttgct cgcccagtag
     1921 tacctcaaag agcccgccgt tggcgtcgaa gcaggaacta tagaggatcg tgtcttcggt
     1981 gcccaggaag gtgctgatcg cctgttcgag ttgtttgtgg agatcctgcg tgccgcagat
     2041 gaaccggacg gaggccattc cgtagccatg ctcttgcagt ccgg
//
LOCUS       DATILV010000281         6417 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1344468, whole genome shotgun sequence.
ACCESSION   DATILV010000281 DATILV010000000
VERSION     DATILV010000281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6417)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6417)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6417
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1344468"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(213..1676)
                     /locus_tag="VLJ17_06410"
     CDS             complement(213..1676)
                     /locus_tag="VLJ17_06410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22645.1"
                     /translation="MTRLLVSASIGLFVFVIILTMAALAARSGVMADDAVMLWAGAIT
                     AGDGGMPIGVIAAAYPTIPFLASTVIELVAPAGMPGPALLAAGIGGLLASIWYLSLRT
                     VGVPLLAAVATTLLLILHPGLLRPAISGPSEVLFVFFLYLLGRGLYDLRSRTGASEVM
                     SVGLSLAGLAFSHPMGAAIACAAMPFLIFAVRPMLVANSAINVVLTLIFPTVFSAAAF
                     AYVSWVFPGSGWSFLVSPAEGISTWTASFVRGFGGTITGMVAIDVGVAAAYGFALSSP
                     IAVVAMIRVWRRRPLVDPSLVLFATTIAAAVIAVATGLFGDPVAVSAVPPVLAAIVIM
                     RVPDLRTWPGLVLPLLVIGWIGGVIEFAIFDSRIIAQLNAALAPAADPARTDALDLGG
                     TIAARAGVMVDSVNAPAVVVGRGRATGLITPPDENFHLAILMSHVSAPFVAVPDPQSN
                     VGARDQLNKAFPQLFQRGLPGYRLVYQNASWRLFGRE"
     gene            complement(1673..3553)
                     /locus_tag="VLJ17_06415"
     CDS             complement(1673..3553)
                     /locus_tag="VLJ17_06415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011442987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSV22646.1"
                     /translation="MAPLSPADRALGDALVARRVLTLPQLDEAVKLAETWRVRLSDVI
                     LSRNWVRPEALYQGIAYYYDLPFVDLVSDAPDPALLVAAEAEVYAQKLTVPWMRRDGR
                     LVAATAEPGPETVLFARQRWGPDIEFVVASKFDIVWTVQTAFGESISRHAVMDLAEQD
                     QALSAREVFTLAQVVVGYALMTVFMFGFAVGPIATLIGLNIAMSVFYLGNFVFKGILV
                     SVGGRRSADNDQEIEIAARALRDEDLPVFTILVPMFREHKMLPALAESLRNLDYPLGK
                     LDIKLVLEADDRETIEAARTLGLEGVFEVIRVPPSKPQTKPKACNFALQFARGEYLVV
                     FDAEDRPEPDQLRKVVATFHKSSPNTACLQCRLNYFNADENWLTRMFTLDYSLWFDQV
                     LPGLERLNVPIPLGGTSNHFKIKVLRELHGWDPFNVTEDADLGIRLTQKGYRVGVVDS
                     TTFEEATCHVGNWVRQRSRWMKGYMQTFLVHTRRPLHLIHTTGSLGFFGFVFFVGGTV
                     LSALFNPIFWVMYLFWLAALAGGLDPVFPQYLQFLSLFNLLAGNGAFIYLSMLAPMRR
                     GWLDLIPYSLTVFGYWILISIAAYKGLWQLLRNPFYWEKTPHGLSQHAAAALPIPREA
                     VS"
     gene            complement(3560..5521)
                     /locus_tag="VLJ17_06420"
     CDS             complement(3560..5521)
                     /locus_tag="VLJ17_06420"
                     /inference="COORDINATES: protein motif:HMM:NF015149.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006011 - UDP-glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis cyclic di-GMP-binding
                     regulatory protein BcsB"
                     /protein_id="HSV22647.1"
                     /translation="MLTADTGSITAALSGAPTIISTLTFADLGFGNGIRFANLGGRRE
                     IFIHLPQGLTVNSAELVLMLDDMTAYSAQRNLEILVNDRSAAAIALDGKASARMVRIP
                     LGSAKTRDGFLKVSFQYAGAATQDRCIDVRSVGDSVSIRPDSAVEFEVGLAGVSDVAT
                     TAALMPHDVAIVLPRRPLAPRELAAALTVARSLSASGRRATFRHGYESLPDLAERGDT
                     RRWSRGLVVIGSLDEVSGHLDAPVATLAGPLPTFGTLAAVRVSGLPALLVTDITTAQA
                     SGLIGSPWLAATRGVAAASVGDNPPPKLPSERVSFTELGLAPALAEVFGRAELTMAIN
                     TRALPTGTRAARLALDIMVAPDSAGERAVVSVFVNEQLLGSAVAEIDKPTRFDLPFPD
                     GLIGTMINIRAVIQRRSAQGDCRFEPQGYPAQIQGSSTIVLAPADARAHDFSDLVALW
                     ANGLEILLPAAAAEQPEHALGMLSGVLSALSSEGAPITVRLVAAGDVSAPEGPFLDIS
                     DTAPVGGPPRVRFDRGRVTVVDRSDRTLLDLGGFATGAVAQVMTAGVHPGLWIKPLAA
                     DGTLPVPAELRLERGDVAFLDKTGVALAMSTERDTLVRIAYPDQVSWFTVAERFRSWI
                     IGGLWVLGSLLFLLGLQSVVRRRSGSASG"
     gene            complement(5812..6189)
                     /locus_tag="VLJ17_06425"
     CDS             complement(5812..6189)
                     /locus_tag="VLJ17_06425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HSV22648.1"
                     /translation="MPPDQFSGRLDVVRKRFASSLESNIKDIHAGLQNLSDGGANAVD
                     AVANAYRRIHGICGVGGAVGFAATGRAAKDVEDVLIGAYRGQRGLEAAEISRLEKMLS
                     VLVTTAQTELSSNASFVTPKDEK"
BASE COUNT         1418 a         1962 c         1926 g         1111 t
ORIGIN      
        1 gggcttccga tatccatcag cttgaatgcc tcccaagcgg actgtgcgac gcagatgtct
       61 gagtatcctg cggaagccag cgcagcttcg gtgagatcgc gagagtcttc ggagtcgtcg
      121 acgatcagga tgcgcatata aatctccgtt tgacgttcag gctttagttt ctgttcgttg
      181 aggtcgccgc cgttccgacg caccgtcctg cctcactccc tgccgaatag ccgccaactg
      241 gcgttttggt agaccaggcg atagcccggc agaccgcgct ggaagagttg cgggaatgct
      301 ttgttgagct ggtcccgagc accgacattg ctttgcggat ccggaaccgc gacgaatggc
      361 gcgctgacgt gggacatcag aatcgccagg tggaaatttt cgtccggtgg cgtaatcaac
      421 cccgttgcgc ggccgcggcc gaccacgact gccggcgcat tgacgctgtc gaccattacg
      481 ccggcgcgcg ccgcaatggt gccaccgaga tcgagcgcat ccgtgcgtgc cgggtcggcg
      541 gcgggcgcca acgcggcgtt cagctgagcg atgatgcgag aatcgaagat cgcgaactcg
      601 atcactcccc caatccatcc aatcaccaat agcggcaaaa cgagcccggg ccaggtgcgc
      661 aggtccggca cgcgcatgat gacgatcgcg gcgagcaccg gcggcacggc gctgactgca
      721 accggatcgc cgaatagccc ggtggcgaca gcgatcactg ctgccgctat ggtggtggca
      781 aagagcacga gcgaaggatc gacgagtggg cgccgccgcc atacccggat catggcgacc
      841 accgcgatcg gagagctcag tgcaaaacca tacgcagccg caacgcccac gtcgatcgca
      901 accatgcccg taatggtgcc gccgaagccg cggacgaagg atgccgtcca cgtggaaatg
      961 ccttcggccg gagaaaccag aaagctccag ccgctgccgg ggaataccca tgacacgtaa
     1021 gcgaatgccg ctgccgagaa gacggtcgga aatatcagcg tgagcacgac gttgatggct
     1081 gaattggcga ccagcatcgg acgcaccgca aagatcaaga aaggcatcgc ggcgcaggcg
     1141 atcgcagcac ccatcgggtg cgagaaggcg agtcccgcca aactaagccc aaccgacatc
     1201 acctcggacg caccggtgcg gctgcgcagg tcataaaggc cacggcccaa caggtacaga
     1261 aagaaaacga acagcacttc ggagggcccg ctaatggcag gccgcaacag cccgggatgc
     1321 aagatcagca ataatgttgt tgcgacagcc gccaatagcg gcacaccgac agtgcgcaga
     1381 gacagatacc aaatgcttgc cagcaagccg ccgattccgg ccgcgagcag tgccgggccc
     1441 ggcatgccag cgggcgcaac aagctcgatc accgtgctcg ccaaaaacgg aatagtcgga
     1501 taggcggcgg cgatcacgcc gatgggcatg ccaccgtcac cagccgtgat cgcgccggcc
     1561 cagagcataa cggcgtcgtc cgccataacg ccgctgcgcg ctgccagggc ggccatcgtc
     1621 aagataatga caaatacgaa cagcccgatc gacgccgata cgagaaggcg ggtcacgaca
     1681 cagcctcccg agggatcggg agcgccgcag ctgcatgctg cgaaagcccg tgcggggttt
     1741 tctcccaata gaagggattg cgcagcagct gccaaagtcc cttataagcg gcaatcgata
     1801 tcaagatcca atagccgaaa accgtaagac tatagggaat gagatcaagc cagccgcgcc
     1861 gcattggcgc cagcatactg aggtagataa aggcgccgtt gccggcgagc agattgaaca
     1921 gactgagaaa ctggaggtac tgcgggaata ctgggtcgag gccccccgca agcgcagcca
     1981 gccagaataa gtacatcacc cagaaaatcg gattgaagag tgccgagagc acggtgccgc
     2041 caacgaagaa cacgaagcca aaaaagccaa gcgacccggt cgtgtgtatt aaatgtagcg
     2101 gccgcctggt gtgaaccagg aaggtctgca tgtaaccttt catccatcgc gaacgctgcc
     2161 ggacccagtt gcccacatgg caggtcgctt cctcaaatgt tgtggagtcg accacaccga
     2221 cgcgataacc cttttgggtc aggcgaatgc cgaggtcggc atcctcggta acgttaaacg
     2281 ggtcccatcc atgcagctcg cgcagcacct tgatcttgaa atgatttgac gtgccgccga
     2341 gcggaatcgg cacgttaagc cgctcgagcc ccggcaacac ttgatcgaac cacagggagt
     2401 agtcgagcgt aaacattcgg gtgagccaat tttcgtcggc gttgaagtag ttgagtctgc
     2461 actgcaggca cgctgtattg ggcgaagact tgtggaacgt agcaacgacc tttctgagct
     2521 ggtcgggctc cggcctgtct tcggcatcga acaccaccag atattcgccg cgggcgaact
     2581 ggagcgcaaa gttgcaggct ttcggcttgg tctgcggctt tgagggcggc acccggatga
     2641 cttcgaacac gccttcgagg ccgagtgtcc gcgcagcttc tatggtttcg cggtcgtccg
     2701 cctccagcac cagcttgatg tcgagcttgc cgagcggata gtcgagattg cgcaagctct
     2761 ccgcgagcgc tggcagcatc ttgtgctcac ggaacatcgg aacaagaatg gtgaataccg
     2821 gcaggtcctc gtcacgcaga gcgcgtgccg cgatctcgat ctcctgatcg ttgtcagctg
     2881 accgcctgcc gccgactgaa accagaattc ccttgaatac aaagtttccg agatagaata
     2941 cgctcatcgc aatgttcaga ccgatgagcg tagcaatcgg accgaccgca aagccgaaca
     3001 tgaatacggt catcaaagca tagccaacca caacctgcgc cagcgtgaag acctctcggg
     3061 cggacagagc ctgatcctgc tccgcaagat ccatcactgc gtgacgtgag atcgactcac
     3121 cgaacgccgt ttgcaccgtc cagacgatgt cgaacttgga agcgaccaca aactcgatgt
     3181 ccggtcccca gcgctgccgc gcgaacagca ccgtttccgg gcccggctcg gcggtcgccg
     3241 ctacgaggcg cccatcgcgg cgcatccaag gcacggtgag cttttgagca tagacctcgg
     3301 cttcggccgc gacgagcagt gcggggtcgg gcgcgtcgct aacgagatcc acgaaaggca
     3361 agtcgtaata ataggcgata ccctgataga gcgcttccgg gcgaacccaa tttcgcgata
     3421 gaattacgtc gctgagacgt acccgccacg tttcggcgag cttcacagct tcgtcgagtt
     3481 gcgggagcgt gagaacacgg cgggcgacga gggcatcgcc aagcgcacgg tcggcgggcg
     3541 agagcggtgc cattcctcac tatccgctgg ccgagccgga gcggcggcga actacgcttt
     3601 gcaacccaag caggaacagg aggctgccga gcacccacag gccaccgatg atccatgacc
     3661 gaaaccgttc cgcgacggtg aaccacgata cttggtccgg gtaggcaatt ctgaccagcg
     3721 tgtcgcgctc cgtcgacatc gccaatgcaa caccggtctt gtctagaaag gcaacgtcgc
     3781 cacgttcgag acgaagttct gcggggaccg gcagcgttcc gtcggcggca agcggtttga
     3841 tccaaaggcc cggatgaacg cccgccgtca tgacctgggc gacggctccg gtcgcgaagc
     3901 ccccaagatc gagcaaggtg cggtcagacc gatcaaccac cgtgactctg ccgcgatcga
     3961 atcgcacccg tggtgggccg ccgacgggcg cggtatcact gatgtctagg aacggcccct
     4021 ccggtgccga aacatcgcca gccgcaacga gcctaaccgt tatgggggcg ccttctgacg
     4081 acagcgcgct caatacgccg ctcagcatcc cgagtgcatg ctcaggctgc tcggcagcgg
     4141 cagcgggcag caaaatttcg agaccattcg cccacaacgc gacgagatcg gaaaaatcgt
     4201 gggcgcgcgc atccgcaggc gccagcacaa tcgtactcga gccctggatc tgcgccggat
     4261 aaccctgtgg ctcgaagcgg cagtcgcctt gtgcgctgcg tcgctgaatt acggcgcgga
     4321 tattgatcat cgtgccgatg aggccgtcgg ggaacggcaa atcaaatcgc gtcggcttgt
     4381 cgatttccgc caccgcgctg ccgagcagct gttcattaac aaacacgctc acaactgcgc
     4441 gctctccggc gctatcggga gccaccatga tgtcgagggc gagacgggcc gcgcgggtcc
     4501 cggttggcag cgcccgcgta ttgatggcca tcgtcagctc agcgcgaccg aacacctccg
     4561 caagcgccgg tgccaagcca agctcggtaa aactgacgcg ctccgatggc agcttcggtg
     4621 gcggattgtc gccgaccgac gccgccgcca cgcctcgggt ggcagcaagc cagggactgc
     4681 cgatcagtcc gctcgcctgt gccgtggtga tatccgttac cagcagagcc ggcaggcctg
     4741 aaacgcgcac agccgccagc gttccgaaag tcggcaacgg cccggcgagc gtcgcaacgg
     4801 gagcatccag gtggccggaa acctcatcaa gcgatccgat cacgaccagg ccccggctcc
     4861 agcgccgcgt atcgccgcgc tcggcaaggt ccggcaagga ttcataaccg tgcctaaacg
     4921 tcgcgcgacg gccggatgcc gacagagagc gggcgaccgt gagcgcggcc gccagctccc
     4981 gcggcgccag cggccggcgt ggaagcacaa tcgcaacatc gtgcggcatg agcgcagccg
     5041 tggtggcaac atcagacacg ccggcgaggc cgacctcaaa ttcgactgcg gaatcgggac
     5101 gtatcgatac gctatccccg acggagcgca catcgatgca gcgatcctgg gtggcagctc
     5161 cagcatactg aaacgagacc ttcaaaaatc cgtcccgggt cttggcactt ccaagaggaa
     5221 tccggaccat gcgcgcactg gcctttccgt ccagcgcaat cgccgcagcg ctgcggtcgt
     5281 tgaccaggat ttcgagattg cgctgcgcac tataggcggt catgtcgtca agcatgagca
     5341 caagctcagc ggaattgacg gtcagtccct gcggtaggtg aatgaagatt tcgcggcgtc
     5401 cgcccagatt tgcgaaccgg attccgttgc caaatccaag gtcggcaaat gtcagagtcg
     5461 agatgatggt aggcgcccca gagagcgctg cggtaatcga gccggtatct gcggttagca
     5521 atcgttctgg tgctggtgct tgtgcttgta cctgtgttgt ggccggtgct ggtgctggcg
     5581 cttgtacctg tgttgtggca ggtgctggtg cctgtgcttg tacctgtgtt gtggccggtt
     5641 ctgatgctgg cacccgtatg ggtactggcg cctgtacccg tcccggtggc cgaggcggga
     5701 gcggaatctg tgcccgagtc tgcgcaagcg ccgcgccttg cgtatatgcg caggcgagga
     5761 acagccagat cgtcagcacg aggcgcaatg aacgtcggaa caccattgcg cctacttctc
     5821 gtccttcgga gttacaaagc tcgcgttgga gctcagttcc gtttgcgcag tcgttaccag
     5881 cacgctgagc attttttcaa gccgcgagat ttcagctgcc tcaagcccgc gttgaccgcg
     5941 atatgcgccg atcagaacat cctcgacgtc ctttgcggcg cggccggtcg ccgcgaagcc
     6001 gacggctccg cctactccgc aaatgccgtg aatacggcga tatgcgtttg cgaccgcatc
     6061 gacagcgttc gcaccgccat ctgaaaggtt ctgcaacccc gcatgtatgt ctttgatgtt
     6121 actttcaagc gacgaagcaa accgcttgcg cacaacgtca agacgaccgc taaattgatc
     6181 aggcggcatt atccattcct ccgacaatgc tggcctgaag attgcaataa taatagaaca
     6241 ataagtaaat taacctcctg ataacttcca tattattgca atttgcgccc atcgtcgcgt
     6301 tataaatata cggacgcacc caaaatactt ggcctttcag ccaaatataa gcatgaatac
     6361 ctatagcgaa ttatttagtg ttcatatcac ggcggattaa aatttacgaa aagtccg
//
LOCUS       DATILV010000282         3242 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1599159, whole genome shotgun sequence.
ACCESSION   DATILV010000282 DATILV010000000
VERSION     DATILV010000282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3242
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1599159"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..440
                     /locus_tag="VLJ17_06430"
     CDS             <1..440
                     /locus_tag="VLJ17_06430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="arylsulfatase"
                     /protein_id="HSV22649.1"
                     /translation="NQREYLEGTSARSARDFFFYFSGATPSAVRYKNWKMYYTMSQPG
                     PAGWIMPLVPFHFTLVQNIKRDPFEQSVGIDQKSAMSMGGALGAPMTAFQYDWNMLPL
                     GQQLWLEHLLSYEKFPPLQAPESYNLSGILDQVKKANASHAAD"
     gene            complement(835..2688)
                     /locus_tag="VLJ17_06435"
     CDS             complement(835..2688)
                     /locus_tag="VLJ17_06435"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate binding protein"
                     /protein_id="HSV22650.1"
                     /translation="MRQRCLRTAVAFCLLAISARPTVGLGEEQLPRSVLILNQSTSIR
                     PLPIAIIDGIRTTMDGKLPGAMSYYIEHVDLYRFNSSLYKNSLQGHLSVKYRDKPIGV
                     IIAIGPGGLDLALELHGSLWPTAPVVFAAVATDTLVHKLPPGVTGTFIELKLANTIEV
                     ARAIVPNLRQIAIVGDRFEEQLYYRRFADQLPEFSRTVEFIELMGLPLREVRRRVAAL
                     PNSGVVYYIGTNSDPGATYTSAAAVLPSIVEVANRPIIVDSETLLGSGAVGGFMLRPY
                     QIGQDAGRLALRILNGENPSDIPTTTGSNSKAIFDWRQLQRWGVSENRLPPQSEIRFR
                     EPSIWDLYRAQILVAFAAVLAQAAVISWLLSERRRRRVAEATTRETMSDLVHVNRMAT
                     AGELSASIAHEINQPLAGMVSNANAGIRWLAGATPDLGRVESSLKQIVAAGHHASEVI
                     AGIRGLIKRGTEERAPVQINELIHNAIALERRDIERHHVLLTLDLDESLPDLIGDRVQ
                     LLQVILNLIRNAIEAMSPDRVQTLRIRSELDESRDILVSVEDSGTGIDQQNIGRVFEP
                     LFTTKPQGLGIGLSICRSIIESHDGRLWVTSTVGRGSTFFIKLPRYMAGDG"
     gene            2925..3173
                     /locus_tag="VLJ17_06440"
     CDS             2925..3173
                     /locus_tag="VLJ17_06440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018407228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSV22651.1"
                     /translation="MGSRIHQRGSRNHPLSKAQENANHQKSKVRARVEHVFGAQQNSL
                     GGRIVRTIGITRAKAKIALQNLAYNIGRLVTLERMAAA"
BASE COUNT          728 a          936 c          901 g          677 t
ORIGIN      
        1 tcaaccagcg cgaatacctc gaaggcacct cagcgaggtc ggcgcgtgac ttcttcttct
       61 atttctccgg cgcaacgccg tccgccgtgc gctacaagaa ctggaagatg tactacacca
      121 tgtcgcagcc aggaccggcc ggctggatca tgccgcttgt ccccttccac ttcaccctgg
      181 tgcagaacat caagcgcgac ccattcgagc aatcggtcgg catcgaccag aagtcggcca
      241 tgagcatggg cggtgcgctc ggcgccccga tgaccgcctt ccagtacgac tggaacatgc
      301 tgcccctcgg ccagcagttg tggctcgaac atctgctgtc gtacgagaag ttcccgccgc
      361 tgcaggcgcc cgagtcctac aacctcagtg gaatcctgga ccaggtcaag aaggcgaatg
      421 ccagccacgc ggctgactag ccgcttgaaa caagcgcgac atgctcaagc ggacgcccca
      481 cgggcgtccg cgcccgacag gcgcaaacag ctgaacaggc ggagtggcta ccatgaccag
      541 gaatcgctcg ctgcagttaa ggccgccaac aagcacgact ttggcccact gatgaagttc
      601 gtgcggtcgt gaaggcgcgc gctacgcgcc cgtgcgaacg ggcagatagc cgggattgag
      661 cgcagaaaaa tcattggtct gcggcgcgat ccgccggtga tcggggttga tgtttcatcg
      721 cggccatgct ttgcgcaata cccgccgtcg aagcattgat atttatcaga gccggttaat
      781 gcaaaatgcc gttcgaacgc gtcagcattt ttatgacctt ttccgcgcct gttgctagcc
      841 gtcgccggcc atgtacctcg gcagcttgat aaaaaatgtt gagccccgtc caaccgttga
      901 cgttacccat aaccggccat catggctctc gatgatagat cggcagatcg aaaggcctat
      961 tcccaacccc tgtggcttcg tggtgaatag cggctcgaag acgcggccga tgttttgctg
     1021 gtcgattccg gttccggagt cttccacaga gaccaatatg tctctagatt cgtcgagttc
     1081 ggatcttata cgcagggtct gtacgcgatc ggggctcatg gcctcgatcg cgttcctgat
     1141 caggttcaaa attacctgaa gtaactggac ccgatcgcca atgaggtcag gaagcgattc
     1201 gtccagatcg agcgtgagca atacgtgatg tctttcgatg tcgcgccgct caagcgctat
     1261 ggcattgtgg atgagttcgt taatctgaac aggggcgcgc tcttcggtac cacgcttgat
     1321 gagacccctt atgcccgcga tcacctcgct cgcatgatgc cctgcagcga cgatctgttt
     1381 gagcgacgat tccaccctgc caaggtcggg agttgcgcca gcgagccagc ggatgcctgc
     1441 gttcgcattt gacaccatgc ccgccaacgg ctggttgatc tcgtgagcaa tcgaagcgga
     1501 caactcaccg gcagttgcca tgcgattgac gtgcacgagg tcggacatgg tctcgcgcgt
     1561 tgtagcttcg gctacccgcc gtcggcggcg ctcggagagc aaccaagaga tcaccgccgc
     1621 ctgcgccaga accgcggcaa acgccaccag gatctgcgca cgatataggt cccagatact
     1681 cggctcacga aatcgtattt cgctttgtgg cggaagccta ttctcactga cgccccatcg
     1741 ttgaagttgg cgccagtcaa agatagcttt cgagttgctg cccgttgttg tgggaatatc
     1801 cgatgggttc tctccattca agattcgcag tgcgagccgt cccgcatcct ggcctatctg
     1861 atagggtctc aacatgaagc caccaacagc gcctgatcct aatagggttt ccgaatcaac
     1921 gatgataggt cggttggcga cctccacaat ggacgggagc actgccgccg ctgatgtata
     1981 tgtcgcgccc ggatcggaat tggtgccgat gtaataaacg acgccactgt ttggcaacgc
     2041 agcaacgcgt cgtctgactt ccctaagggg tagacccatg agttcaatga attcaaccgt
     2101 gcgcgaaaac tcaggaagct gatcggcaaa acgacgataa tagagctgtt cttcaaatcg
     2161 gtcgcctaca atcgcaatct gcctgaggtt gggcacaatc gcacgtgcca cctcaattgt
     2221 gttggcgagc tttagctcaa taaaagtgcc ggtcacgccc ggcggaagtt tgtgcaccag
     2281 cgtatcggta gcaaccgcag caaacaccac tggcgcagtt ggccacaacg agccgtgcag
     2341 ctccaacgca agatcgagac cgcctggtcc gatggctatt atgacgccaa tcggcttatc
     2401 gcgatacttg acgctcaagt gaccttgcaa gctattcttg tatagcgaac tgttaaatcg
     2461 gtataggtca acatgctcaa tataatagga catcgctccc ggcagtttgc catccatagt
     2521 cgttctgatt ccgtcgatga tagcgattgg caatggacga atcgaagtcg actggttaag
     2581 aatgagcacc gatcgcggca attgctcctc gcccaaaccg accgtcggcc gcgcagatat
     2641 tgccaagagg caaaaagcga cggccgtgcg taagcatctc tggcgcatat caatacaaat
     2701 agcggaggtc ggtactcact cggcgcgttt tcatggggac tcttagtcgg agcataccac
     2761 ttgatttgca aaccacctat cgcggcgcta tgggcaagat tagcgggagg tgccgtgtta
     2821 ccccttagtc atcccctcat tttttgaaat aaaagaatcg ggcggggtgc gaaatctttc
     2881 caaaaagaat cggctctgat ttttttgaag cctgcgctga ctgcttgggc agtcgcattc
     2941 accaacgtgg gagccgcaat catccgctat cgaaagcgca ggagaatgcg aaccaccaga
     3001 agagcaaggt gcgggctcgc gtcgaacacg tgttcggtgc tcagcaaaac tcactgggag
     3061 gtcggatcgt gcggacgatc ggcatcacgc gggcgaaagc caagattgcc ctgcagaacc
     3121 tcgcctacaa catcggccgg cttgtgacgc tggagcgtat ggctgccgca taggggagaa
     3181 gtccgtccgg agcgtccccc acggggcgct cggcgcacaa accaagcgta tctacgataa
     3241 at
//
LOCUS       DATILV010000283         3369 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2876491, whole genome shotgun sequence.
ACCESSION   DATILV010000283 DATILV010000000
VERSION     DATILV010000283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3369)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3369)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3369
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2876491"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1013)
                     /locus_tag="VLJ17_06445"
     CDS             complement(<1..1013)
                     /locus_tag="VLJ17_06445"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HSV22652.1"
                     /translation="MASTSPILIVGAGTTGLAMACELARHGAPVRIIDRQSGINPPYR
                     ACSLHARTLEIFHDFGIVDEILAQGHKVLGMSQYANGERFMHSSGSEIDSPYPYTVNL
                     EQCKTEAALERLLHSYRIEVERETELLATSGRPDRVSATIRRANSSEEVVETPWLIGC
                     DGAHSRVRHLNHLHFPGTEDLHQYCLADVLVESTLAHDEIHTYMGDRGLLFFFPLPNR
                     RWLIAADLPTQHDALKEQPSLEDVRAIASERGPTGIRISDPRWLAYFRINYRAARHYR
                     HERIFLAGDAVHIHSSMGGQGMNTGIQDAYNLAWKLALVHRGRAPVGLLDSYEKERRP
                     VAE"
     gene            1342..2472
                     /locus_tag="VLJ17_06450"
     CDS             1342..2472
                     /locus_tag="VLJ17_06450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22653.1"
                     /translation="MSYKMKAAALVACMLAIGVAFTPQKASAQVCDGDPQQTALARPI
                     PLGISGGNIHSIIRFNKRSKIKGCFGGTLGSMVQDSSLNQFILSNNHVIADQNTAKPG
                     ERIVQPGLNDVTCLKSPTNAVATFSKAIHINFAGGNNTVDAAIAAVEPGLVSPDILFI
                     GEIADSTATPVIALPVQKMGRTTCLTTGVIAAVNANVTVNYSEIRKPKLAKFINQILV
                     TGSSDTPTFGGPGDSGSLIVTQGTCPQAVALLFAGSTGGGVTIANPISEVLSKLSVSM
                     VGSCTASLASDTSPANVLAGSFGVSMQALTAATSVRDRHESQLMNIKDAVGTGIGVSD
                     GSGHPSLEVYVKKLTPEMQAAAPKDVDGLPVKLVESGEFVAY"
     gene            2651..>3369
                     /locus_tag="VLJ17_06455"
     CDS             2651..>3369
                     /locus_tag="VLJ17_06455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxide hydrolase"
                     /protein_id="HSV22654.1"
                     /translation="MSNEITPFRISATDAELDDLKRRLRGTRWPERECVDDWSQGLPL
                     AYAKEVCAYWLEKYDWRERESRLNRFAQFKTTIDGLAIHFIHVRSPNPDALPLVMTHG
                     WPGSIVEFQKVIEPLTNPAAHGGDAADAFHVVCPSLPGYGFSDKPSRTGWNVQRIGRA
                     WSELMPRLGYKRYAAQGGDWGAMVTTCIGIQDPANCVGIHLNMPIALPDPATANDMTE
                     KENAAIAGMKYYNDWDSGYSK"
BASE COUNT          732 a          932 c         1014 g          691 t
ORIGIN      
        1 tcctcagcaa ctggccgccg ctccttctcg tagctgtcga gcagacccac cggcgcacgg
       61 ccgcgatgga ccagcgctag cttccaggcc aggttgtagg cgtcctggat accggtattc
      121 atgccctgcc cgcccatcga gctgtggata tgtactgcat caccagccag aaagatgcgt
      181 tcgtggcgat aatgtcgcgc ggccctgtag ttgatgcgga agtaggccag ccagcgcgga
      241 tcgctgatgc gtatgccggt cggtcctcgt tcggatgcga ttgcccgcac gtcttccagg
      301 ctgggctgct ctttgagcgc atcgtgctgc gtcggcaggt cagcagcaat caaccaccgc
      361 cggttcggta gcgggaagaa aaaaagcaag ccacggtcgc ccatgtaggt atgtatttcg
      421 tcgtgggcaa gcgtgctctc cacgagtaca tcggcgaggc aatactgatg caggtcttcg
      481 gtgcccggaa agtgaaggtg gttcaggtgg cgcactcggc tgtgggctcc gtcgcatccg
      541 atgagccatg gagtctcaac cacttcctca gagctgttag cgcggcggat cgtggccgag
      601 acccggtcgg gccggccgga agtcgcgagt agttcggtct cgcgctctac ttcgatgcga
      661 tagctgtgga gcagacgctc caaggccgct tccgttttgc actgctcgag gttcaccgtg
      721 tagggatatg ggctgtcgat ttcactgccg ctggagtgca tgaagcgttc gccgttggcg
      781 tactggctca tgcccagcac cttgtgaccc tgggcaagaa tctcgtcgac gatcccgaag
      841 tcgtgaaaga tctcgagtgt ccgtgcgtgc aaggagcatg cgcggtaagg cggattgatg
      901 ccggactgcc ggtcgatgat acgcaccggc gcgccatggc gagccagttc acaagccatc
      961 gcgagcccgg tggtgccggc gccgacaatc aagatcggtg aggtgctagc catacgggcc
     1021 gattctccga aactaatcgt ggagaagtag attatgctcg tgcgtcctgc ggactccaac
     1081 cacgcagaaa gcgcacagga ttaacgctcg tgccgcttac cagacgctgc acctgattaa
     1141 cgcccagtcg gtggaagccg tcaatcgcat cgtggcgcat tgtagatcgc tgcctgacga
     1201 gtgttaaaac acggttagca tgcattggag cgtcatagat agtgaggggt cgatatttgg
     1261 cccaaacctt gctgttaacg cgcaaacaac tgcaaacttc tatttttgga agcggaaagg
     1321 tgcggaaaga tggggagaac tatgagttat aagatgaagg cggcagcgtt ggttgcttgc
     1381 atgcttgcga ttggtgttgc gtttacgcca caaaaggcgt ccgcccaagt gtgcgacgga
     1441 gatcctcaac aaacggcgtt ggcccggcca attccgctcg gtatttcggg cggaaatatc
     1501 cactcgatca tcagattcaa caagcgcagt aagataaaag gctgcttcgg cgggacgttg
     1561 ggatcgatgg tccaggattc aagcctcaac caattcatcc ttagcaataa tcatgtgatc
     1621 gcggaccaaa acacggcgaa acccggcgag cgcatcgtgc agcccggcct taacgacgta
     1681 acatgcctga agtcgccgac caatgcggtt gcaacgttca gtaaagccat acatatcaat
     1741 ttcgcaggcg gtaacaacac tgtcgacgca gctatagcgg cggtcgagcc aggattggtg
     1801 agccctgaca tcctttttat aggggagatc gcagactcga cggcgacgcc tgtaattgcg
     1861 ctgcccgtgc agaaaatggg ccgcacgacc tgccttacga cgggagtgat cgcggcagtg
     1921 aacgccaacg tgacggtaaa ctattccgag atccgtaagc cgaaattggc taaattcatc
     1981 aaccagattc tcgtaaccgg cagcagtgac accccgacct tcggtggacc cggcgactct
     2041 ggatcactaa tcgtaactca agggacttgc ccccaggcag tagctttgct tttcgcgggc
     2101 tcgactggcg gcggcgtcac gatagccaat ccaatttcgg aagtgctgag caagctgagc
     2161 gtttcgatgg taggaagttg caccgcatcg ctggcatccg atacgagccc ggcgaatgtc
     2221 ctggccggga gttttggcgt gtcgatgcag gccctaacgg cggccacctc ggttcgcgat
     2281 cggcacgaga gccaactcat gaacatcaag gacgccgtcg gtaccggaat cggtgttagc
     2341 gacgggtccg gtcatccgtc tctcgaagtt tacgtcaaga agctgacgcc cgagatgcaa
     2401 gccgccgcgc cgaaagatgt cgacggcctt ccggtgaagc tggtcgagag cggagaattc
     2461 gtcgcttact gagccagcga gcacgatcag ataatcagac ataagatggc gacggcagca
     2521 attgccgtcg ccattttcca tcgcagttct gacagatcgt cgagactgca tttcccgtaa
     2581 cttgacatac acaggtcctt gggcgactga tccgactttc cgctgagttt atcctggagg
     2641 ctgaaagtcg atgagcaacg aaatcacccc attccgaatc tctgcaaccg acgctgaact
     2701 cgacgatttg aagcgccgcc tgcgcggcac gcgatggccg gagcgggagt gtgtcgatga
     2761 ttggtcgcag gggttgccgc tcgcgtacgc gaaagaggtc tgcgcgtatt ggctcgagaa
     2821 atacgactgg cgggaacgag agtcacggct caatcgcttt gcgcagttca agacgacgat
     2881 cgacggactc gcgatacatt ttatccacgt tcgttcgccg aatcccgacg ctcttccatt
     2941 ggtcatgact cacggctggc cgggctcgat cgtggagttt cagaaagtga tcgaaccgct
     3001 gactaatcca gctgctcatg gtggtgatgc tgccgatgcg tttcacgttg tgtgcccatc
     3061 gcttccgggc tacggctttt ctgacaagcc gtcgcggacc gggtggaacg tgcaacggat
     3121 cgggcgcgca tggtcggagc tgatgccccg gctgggatac aagcgttacg cggctcaagg
     3181 cggcgattgg ggagcgatgg taacgacctg catcggtatt caggatcccg ccaactgtgt
     3241 cggcatccac ctgaacatgc cgatcgcact gccggatccg gcgaccgcaa acgatatgac
     3301 tgaaaaagaa aacgccgcga tcgccgggat gaagtattac aacgattggg actcgggata
     3361 ttccaagca
//
LOCUS       DATILV010000284        10794 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1600753, whole genome shotgun sequence.
ACCESSION   DATILV010000284 DATILV010000000
VERSION     DATILV010000284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10794)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10794)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10794
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1600753"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2000
                     /locus_tag="VLJ17_06460"
     CDS             <1..2000
                     /locus_tag="VLJ17_06460"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004591 - oxoglutarate dehydrogenase
                     (succinyl-transferring) activity [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HSV22655.1"
                     /translation="DAVEGSGDVKYHLGASSDREFDDNKVHLSLTANPSHLEIVNPVV
                     LGKTRAKQDQLGAAPEDRTCAMPLLISGDAAFAGQGVIAECFGLSGLRGHRTGGSVHF
                     IVNNQIGFTTYPRYSRSSRYPSDVAKMIEAPIFHANGDDPEAVVFAAKIATEFRQKFQ
                     KPVVIDMFCYRRHGHNEGDEPMFTQPLMYKAIQSHPTTLEIYAQKLIAEGVVTSGEVE
                     KMKRDWRARLDVELEASQSYKSNKADWLDGRWAGFKNVADTLDDPRRGNTGVELKALR
                     NMGAKITVVPQGFHVHRTVQRFLDSRRKAIESGEGIDWATAEALAFCSLLTEGHPVRL
                     SGQDSERGTFSQRHSVLIDQENENRHTPFNYVAPGQARYEVINSMLSEEAVLGFEYGY
                     SLAEPNALTLWEAQFGDFANGAQVIFDQFISSGERKWLRMSGLVCLLPHGYEGQGPEH
                     SSARIERFLQMCAEDNMQVANCTTPANYFHILRRQLKREFRKPLILMTPKSLLRHKRA
                     VSRLDELGPGSTFHRLLWDDAQFRRGEKIVLVPDDKIRRVVLCSGKVYFDLYDEREKR
                     GIDDIYLLRVEQLYPFPMKALVQELGRLKQAEIVWCQEEPRNMGCWHFVEPYIEWVLS
                     QVGGVSQRPRYVGRPASAATATGLASKYLAQLKAVLDDALL"
     gene            2087..3331
                     /gene="odhB"
                     /locus_tag="VLJ17_06465"
     CDS             2087..3331
                     /gene="odhB"
                     /locus_tag="VLJ17_06465"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007604327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045252 - oxoglutarate dehydrogenase
                     complex [Evidence IEA];
                     GO_function: GO:0004149 - dihydrolipoyllysine-residue
                     succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HSV22656.1"
                     /translation="MTDIRVPTLGESVTEATIGKWFKQPGDAVAVDEPLVELETDKVT
                     IEVPAPAAGVLSEIVARDGETVAVGALLGQIKQGAGVVAAKSADPAKAASPPKTVSAP
                     VPQPQPPKVAAAEAPLAPSVRRLAAESGIAPAAVPGTGRDGRITKGDMLAAIERAAAA
                     PTTVAQPAAVVQVRAPSPADDAAREERVRMTKLRQTIARRLKDAQNAAAMLTTFNEVD
                     MGAVMALRNQYKDLFEKKHGVKLGFMGFFVRACVQALKELPAVNAEIDGADIIYKNYY
                     HIGIAVGTEKGLVVPVVRDCDTKALSEIEREIAGYGRRARDGQLKIEEMQGGTFTITN
                     GGVYGSLMSTPILNAPQSGILGMHKIQDRPVVVAGKIEVRPMMYLALSYDHRIVDGRE
                     AVTFLVRVKECLEDPARLVLDL"
     gene            3337..4740
                     /gene="lpdA"
                     /locus_tag="VLJ17_06470"
     CDS             3337..4740
                     /gene="lpdA"
                     /locus_tag="VLJ17_06470"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008134171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA];
                     GO_process: GO:0051068 - dihydrolipoamide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HSV22657.1"
                     /translation="MPSYDLIVIGTGPGGYVCAIRAAQLGMKVAVVEKEKTFGGTCLN
                     IGCIPSKAMLHTSELFDQAGHAFGKMGIKVGGPVLDLAAMLRFKDEGVDGNVKGVAFL
                     FRKNKIEAHSGIGRIVAPGKVEVKATRGPSGILEAKAIVIATGSDVARLKGIVIDEKR
                     IVSSTGALSLEKVPRHLLVVGAGVIGLELGSVWRRLGAQVTVVEFLDRILPGIDAEVA
                     RQFQRMLEKQGITFKLASKVATIDSSGPVLKAIVEPAAGGAAVGVDADVALIAIGRVP
                     YTEGLGVEEIGLKLDNRGRIPVDGRFATSVPGIYAIGDVIAGPMLAHKAEDEGVAAAE
                     IIAGKSGHVNYDVIPNVIYTSPEVASVGKTEEELKGANIAYNVGKFPFTANGRAKANQ
                     QTDGFVKILADAKTDQVLGVHIVGSDAGNMIAEAAIAMEFGAAAEDIARTCHAHPTLP
                     EAVKEAALAVDKRAIHM"
     gene            4839..5432
                     /locus_tag="VLJ17_06475"
     CDS             4839..5432
                     /locus_tag="VLJ17_06475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22658.1"
                     /translation="MKRLARPFWVVLALLFLLEAWLWDRLHPIVARIVGVIPWGRIKP
                     AFIRLVDRLSPEATLVVFVIPFIVLLPLKFLEFWFLAHRQWVAAIVVLLLAKLVGLGV
                     TAFIFEVTKHTLLQMAWFRRLYEFFLWARDRAHEKIAPITNRLHEWSHQTIKPIVRRL
                     RRWRRMLHPGHAGRFLERLMRIRRRMLAQRTARASMP"
     gene            complement(5421..6020)
                     /locus_tag="VLJ17_06480"
     CDS             complement(5421..6020)
                     /locus_tag="VLJ17_06480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4337 domain-containing protein"
                     /protein_id="HSV22659.1"
                     /translation="MPEAHEQLEHAEHAEHAAGANKKIALLIAVMALFLALSEMFGKS
                     ANTEAIVHNIHSNDMWNFFQAKTIRRTVVQTAADEMKIEAQGARDTAVKAAMTKQIDD
                     WQKTAARYRSEPETQEGSEELMKRAQTAEQERDVALARYHNYEIASAAFQIGIVLCSA
                     AVITGMVILAWLAGGVAVLGIAFIAIGLWAPNLLHLSGH"
     gene            complement(6132..7100)
                     /locus_tag="VLJ17_06485"
     CDS             complement(6132..7100)
                     /locus_tag="VLJ17_06485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009037 - tyrosine-based site-specific
                     recombinase activity [Evidence IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA];
                     GO_process: GO:0007049 - cell cycle [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HSV22660.1"
                     /translation="MGELTKSDELPFAAPEVAAEISQWLAHLGAERRMSAKTVDAYHR
                     DVRQFLDFLAMHLGCRVTLAALRDLATQDVRAFMAHRRGQGASGRSLMRSLAGVRSFA
                     RFLERQGSGKVGALAAIRAPKTAKTLPKALAVTPAKRLSDISLRAGEARAPWVLARDA
                     AVLALLYGSGLRISEALSLKVKDIPAPGHGDTIIVTGKGNKTRMVPVLLPVLQLIADY
                     FAICPYDRAPDAPAFVGAKGGPLSPRIIQLVMEGLRDALNLPETATPHALRHSFATHL
                     LARGGDLRAIQELLGHASLSTTQVYTAIDADRLMQVYRSTHPRAST"
     gene            7194..9365
                     /locus_tag="VLJ17_06490"
     CDS             7194..9365
                     /locus_tag="VLJ17_06490"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009341257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0032508 - DNA duplex unwinding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HSV22661.1"
                     /translation="MAKRIVDVLIPVALDHAYSYRVPDGWELAPGDLVRVPLGPRECT
                     GVVWADNPTPNPRLDNRLRDVAAKLHIPPLRPELRKFIDWVSGYTLSPRGMVARMALR
                     MGEHLGPERLRVGIRLAGPPPERMTAARARVLRLLADGLAHGKSDAAHEAGVSVGVID
                     GLIDESTLEVLELPAAPVASPPDPAYAVPDFTIAQADASAALRDVVRNGFSVTLLDGV
                     TGSGKTEVYFEAIAEAVARGRQSLILMPEIALTGQFLDRFAARFGVRPAEWHSELSPR
                     RRSRTWHAVAGREVSVIAGARSALFLPYADLGLIVVDEEHDAAYKQEDGVHYHARDMA
                     VVRGHITKIPVVLASATPSIETEVNARRGRYRRLHLPERFGGARLPGIEAIDLTREGP
                     PRGRFVAPRLAEAVKIALERREQALLFLNRRGYAPLTLCRTCGFRFSCPNCDAWLVDH
                     RFRRQLVCHHCGFFTPRPPSCPKCQASDSFVACGPGVERLEEEAAALFPKARILVLSS
                     DLMATAEHMREELKKIVEGHADIVIGTQLVAKGHHFPKLNLVGIVDADLGLSNGDPRA
                     AERTFQLLHQVAGRAGRETGRGYGYLQTHQPNHPVMRAIIAGDREAFYATEIEARERS
                     HYPPFGRLASLVISGPDRPSAERFARRLAGAAPSEEAVRVLGPAEAPIAVIRGRHRFR
                     LLVKAPRSFDLSGYLRGWLGRAPKADKGVRLEVDVDPMSFL"
     gene            9585..10592
                     /gene="dctP"
                     /locus_tag="VLJ17_06495"
     CDS             9585..10592
                     /gene="dctP"
                     /locus_tag="VLJ17_06495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007597075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein DctP"
                     /protein_id="HSV22662.1"
                     /translation="MNALLQLALLSLAMLSCVTVAIGEPIKLKLAYFSSDRSTTYLAC
                     IKPFVEAVNAEAAGIEISVSLSGALGKNPTQQLQLVLDGTADIAFIVPGYTPERFPDN
                     LVVELPGMFRNIREATLVYTRLLAGRTLRGYDDLEVVGAFATEPESIHARPPVISLED
                     LKGKRIRANNALQAAALENLGAIAVQMPINQASSGLSSGKIDGATVSPAPLIEFGISR
                     LAAHHYLLGIGAAPLAVVMNRTKFDSLPGPSQDAIRKFGGEWAAEHYIATYGAENERG
                     LERLRSEPNRTVTVPSEADLRHARAAFGAVIEKWLAGDPRNRELLTKAEAEIAKIRSG
                     S"
     gene            10598..>10794
                     /locus_tag="VLJ17_06500"
     CDS             10598..>10794
                     /locus_tag="VLJ17_06500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22663.1"
                     /translation="MKPLLNMSLRRGVLLLMIASSTVIGGTSAVVKIATEHLLYRDAT
                     STAQNWARLLAESVSDLEQIAG"
BASE COUNT         2110 a         3200 c         3354 g         2130 t
ORIGIN      
        1 cggacgcggt cgaaggctct ggggacgtca agtaccattt gggcgcctct tcggatcgcg
       61 aattcgatga caacaaggtc catctctcat tgaccgcgaa cccatcgcat ctggaaattg
      121 tcaatccagt cgtgctcggt aagacgcgtg ccaagcagga tcaactcggc gccgccccgg
      181 aggatcggac ctgcgccatg ccgttgctga tttccggcga tgccgcattt gccggccaag
      241 gcgtcatcgc cgagtgcttc ggcctatcgg gactgcgcgg gcaccgcacc ggcggttcgg
      301 tacatttcat cgtcaacaat cagatcggtt tcacgaccta tccgcgctac agccggtcgt
      361 cgcgctatcc ttcggacgtg gccaagatga tcgaagcgcc gatctttcat gccaacggcg
      421 atgatcccga ggccgtggtg ttcgccgcga agatcgccac cgaattccgg cagaaattcc
      481 aaaagccggt cgttatcgac atgttctgct atcggcgcca cgggcataac gagggtgacg
      541 agcccatgtt cacccagccg ttgatgtaca aagcaatcca atcccaccct acaactctgg
      601 aaatctatgc ccagaaactg attgctgagg gtgtggtaac cagtggcgag gtcgaaaaga
      661 tgaaacgcga ctggcgcgcg cggctcgacg tcgagctgga ggcgagccag agttataagt
      721 ccaacaaggc cgactggctc gacggtcgct gggctggttt taaaaacgtt gcggatacat
      781 tggacgatcc gcggcgcggc aacaccggcg ttgaacttaa ggcgctcagg aacatgggcg
      841 cgaaaatcac cgtggtgcca cagggctttc atgttcaccg caccgtccag cgctttctcg
      901 actcccgccg caaggcgatc gagtctggcg agggaatcga ttgggcgacc gcagaggcgc
      961 tcgccttctg ttcgctcctc acggaaggcc atccggtccg gctgtcaggt caggactccg
     1021 agcgcggtac gttctcccaa cgccattcgg tgctgatcga tcaggaaaac gagaatcgac
     1081 acacgccgtt caattacgta gctcccgggc aggcacgcta cgaagtcatc aattcgatgc
     1141 tttcggaaga agcagtgctg ggtttcgaat atggctattc gctcgccgag ccgaatgcgc
     1201 ttacgttgtg ggaagcacag ttcggcgatt tcgcgaatgg cgctcaagtc atattcgatc
     1261 agtttatctc gtccggcgag cgcaaatggc tgcgcatgtc ggggctcgtt tgcctgttgc
     1321 cgcatgggta cgaaggccag ggtcccgagc attcctcagc gcggatcgag cgctttctgc
     1381 agatgtgcgc cgaggacaac atgcaggtcg ccaactgtac gacaccggca aactatttcc
     1441 acatcctccg gcgtcagctc aaacgcgagt tccgcaagcc actgattctg atgacgccca
     1501 aaagcctgct ccgccataag cgcgcagtct cgcggctcga cgagttggga ccgggcagca
     1561 cgtttcatcg tttgttgtgg gacgatgccc aatttcgcag aggcgaaaaa atcgtactcg
     1621 ttccagacga caaaatccgg cgggtcgtgc tgtgctcggg caaagtgtat ttcgatctct
     1681 acgacgaacg cgagaaacgt gggatcgacg acatttactt gttgcgtgtc gagcagctct
     1741 atccatttcc gatgaaagca ttggtgcagg agcttggtcg gctcaagcag gcagaaatcg
     1801 tatggtgcca ggaagagccc cgtaacatgg gctgctggca tttcgtcgaa ccctacatcg
     1861 aatgggtgct ctcccaagtg ggtggcgtat cccagcggcc gcgctatgtc ggccggcctg
     1921 cctccgcggc aacggcgaca gggcttgcct ccaaatattt ggcgcaactc aaggcggttc
     1981 tcgacgatgc gctgctatag ggctgaactt gcagccttga agcacgtagc cggcctcttg
     2041 ttcaccgtga ccaatccttg cccagctctg accaggaaac agcctcatga ccgacattcg
     2101 agtgcccacg ctcggcgaat cggtaacgga agccacaatc ggaaaatggt tcaagcaacc
     2161 cggcgacgcg gtggcagtcg acgaaccact ggttgaactt gagactgaca aggtgacgat
     2221 cgaagttccg gcgccggctg ctggtgtgtt gtcggagatc gtcgcaaggg atggcgagac
     2281 cgtagcggtc ggcgccttgc tgggacaaat caaacagggt gccggcgtgg tcgcagccaa
     2341 atccgccgat ccggccaagg ccgcatcgcc gccaaagacc gtttcggcac cggtgcctca
     2401 accacaacca cctaaggtgg ccgccgctga ggcgcccctt gccccttcgg tgcgccggct
     2461 tgccgcagaa tccgggattg cgcccgctgc ggtgccgggc accggccggg acggtcgcat
     2521 cactaaaggc gatatgctgg cggccatcga gcgtgccgcc gcggcgccta cgacagtcgc
     2581 ccagccggcg gctgtcgttc aagttcgcgc accatcgccg gccgatgatg cagcacgtga
     2641 agaacgcgtg cgcatgacca agctacggca gacgatcgcg cggcgtctca aggatgcgca
     2701 aaacgccgct gccatgctga cgaccttcaa cgaggtcgac atgggcgccg tcatggcgct
     2761 gcgcaatcag tacaaggatt tgttcgagaa gaagcacggg gtgaagctcg gcttcatggg
     2821 tttctttgtg cgcgcctgcg tgcaggcgct caaggaactg cctgccgtca acgccgagat
     2881 cgacggcgcc gacatcatct acaagaatta ctatcacatt gggattgcgg tcgggaccga
     2941 aaagggattg gtggtaccgg tggtacgcga ttgcgataca aaggcgctta gcgaaatcga
     3001 gagggagatc gccggctacg ggcggcgcgc tcgtgatggc caactcaaga tcgaggagat
     3061 gcaggggggc accttcacga tcaccaacgg cggcgtctac ggctcactga tgtcaacccc
     3121 gatccttaat gcgccgcagt cgggaattct cggcatgcac aagatccaag acaggcctgt
     3181 tgtcgtagcc ggcaagatcg aagtgcggcc gatgatgtac ttggcgctgt cctacgacca
     3241 ccgcatcgtc gacggacgcg aagccgtgac gtttctggtg cgggtgaagg aatgtctcga
     3301 ggacccggcg cggctggtgt tggatttgta attgtcatgc cttcctacga tctcatcgtc
     3361 atcggcaccg gacccggcgg ctatgtctgc gcgattcgcg ccgcacagct cggcatgaag
     3421 gtcgcagtcg tcgagaagga aaaaaccttc ggcggcacct gtctcaatat cgggtgcatt
     3481 ccgtcaaagg caatgctgca cacttcggag ctgtttgacc aggccggaca tgccttcggc
     3541 aagatgggca tcaaggttgg agggcctgtg cttgatcttg cggccatgct ccggttcaag
     3601 gacgagggcg tcgatggcaa cgtcaaggga gtggcgtttc tgttccgcaa gaacaagatc
     3661 gaagcccaca gtgggatcgg tcggatcgtg gcgcccggaa aggtcgaggt gaaggcaacc
     3721 cgcggaccga gcggcatcct ggaagccaag gcgatcgtca ttgccaccgg ttccgatgtg
     3781 gcgcggctca aaggcatcgt gatcgacgaa aaacgaattg tgtcctcgac cggcgcgctg
     3841 tcacttgaga aagtgccgcg gcatctgttg gtcgttggcg ctggcgtgat tggtcttgaa
     3901 cttggctcgg tatggcggcg gctcggcgcc caagtcacgg tggtggagtt tctcgatcgc
     3961 atcttgcccg gcatcgatgc cgaggttgct cggcaatttc agcgcatgct tgagaagcag
     4021 ggcatcacct tcaaactcgc ctccaaggtg gcgacgatcg attcaagtgg tccggtgttg
     4081 aaggcaatcg tcgaaccggc ggccggcgga gcagccgttg gggtagatgc cgatgtggcg
     4141 ctcattgcca tcggccgggt gccttatacg gaggggcttg gcgtcgaaga gatcgggctt
     4201 aagctcgaca atcgcggcag gattccagtc gatggccgtt tcgccacatc agtgccgggc
     4261 atctatgcca tcggcgacgt gatcgccggg ccgatgttgg ctcacaaggc tgaggatgaa
     4321 ggtgttgcgg ctgcagaaat cattgccggc aagtccggtc acgtgaacta cgatgtcatt
     4381 cccaatgtca tctacacctc gccggaggtg gcttctgtgg gcaagaccga ggaggaactc
     4441 aagggcgcca atatcgcgta caacgtcggg aagtttccgt tcacggccaa cggccgcgcc
     4501 aaggccaatc agcaaaccga tggattcgtg aaaattcttg ccgacgccaa gaccgaccag
     4561 gtgctgggcg tccatatcgt gggctcggac gccggcaata tgatcgcgga agccgcgatt
     4621 gcgatggaat tcggagctgc ggcggaagat atcgcccgta cctgccacgc ccacccgacc
     4681 ctgccggagg ccgtcaagga agccgccctg gctgtcgata agcgcgccat ccatatgtaa
     4741 cggcgtgcgg attttttgcc gcagccgcgc taacgaaccc ggtgttaaga tgccataacc
     4801 aataatgaca ggagccgtga tatcaccagg gttatggcat gaagcgtctt gcacgtccgt
     4861 tctgggttgt ccttgccctg ctgttcctgt tggaagcatg gctttgggat cgccttcatc
     4921 cgatcgtcgc ccgcatcgta ggtgtcattc cgtggggacg gatcaagccg gcgttcatca
     4981 ggttggtcga tcgcctgtcg cctgaggcga cactcgtggt gttcgtcatt ccgttcattg
     5041 ttttgctgcc gctcaagttc ctggagttct ggttcctggc gcaccgccag tgggttgccg
     5101 ccatcgtggt gttgctgctg gcaaagctcg tcggcctagg cgtaacggca ttcatattcg
     5161 aggtcacgaa gcacacgcta ctgcaaatgg cctggttccg gcgcctgtat gaattcttcc
     5221 tgtgggcgcg cgaccgggcg catgagaaaa tcgcgccaat caccaatcgg cttcacgaat
     5281 ggtcccatca aacgatcaaa ccgatcgtgc gtcggctgag gagatggcgg cgaatgctgc
     5341 atcccggcca tgccggccgc ttcctcgaac gactgatgcg aatccgccgc cgcatgctgg
     5401 cgcagcggac ggcgcgcgcc tcaatgccct gaaaggtgga gcagattggg ggcccataat
     5461 ccgatcgcaa tgaatgcaat acccaaaacc gcaacgccgc cagcgagcca cgccagaata
     5521 accattccgg tgataacggc tgccgagcag agcacaatgc cgatttgaaa ggcggccgat
     5581 gcaatttcgt agttgtggta gcgcgcaagc gctacatcgc gttcctgctc ggccgtctgg
     5641 gcgcgcttca taagttcttc ggacccttcc tgggtctcgg gttccgagcg gtaacgcgca
     5701 gccgtcttct gccaatcgtc gatttgcttg gtcatggcag ccttgacggc ggtatccctc
     5761 gcgccctgtg cttcgatctt catctcgtca gccgccgtct gaactacggt tctgcggatg
     5821 gttttggcct gaaaaaagtt ccacatgtcg tttgagtgga tattgtgaac gatggcttcc
     5881 gtgttggcgc tcttgccgaa catttcggaa agcgcaagga acagcgccat gaccgcgatc
     5941 agaagcgcga tcttcttgtt cgcacctgcg gcatgctccg catgttcggc atgttccagt
     6001 tgttcgtgcg cttcaggcat gactcacccc ctggtatacg gcaaagtagg gtatacaaaa
     6061 tgtggtaatg atcggctccg gtgcaagaca acacacataa gacaacacaa atgaacgcga
     6121 ttcgtcccct gtcaggtgga cgcacgcggg tgcgtgctgc ggtaaacttg catgagccgg
     6181 tcagcatcga tagcggtata aacctgtgtg gtcgacaatg atgcgtggcc gagtagttcc
     6241 tggatcgccc gcaaatcgcc gccgcgggcg agcaggtggg tcgcaaagga atgccgcagc
     6301 gcatggggcg tcgcggtttc cggaagattg agcgcgtcgc gcagaccttc catcaccaac
     6361 tggatgattc gtggcgacag gggtccaccc tttgcaccca cgaaggccgg tgcatctggc
     6421 gcgcggtcat agggacagat cgcgaaatag tcggcaatga gttgcagcac gggcaggaga
     6481 accggaacca tgcgggtctt gttgcccttg ccggtaacga tgatggtgtc accgtggccc
     6541 ggcgccggaa tgtccttgac cttgaggctg agcgcctccg aaatgcgcag gcccgatccg
     6601 tagagcagcg ccagcacggc tgcatcccgt gccagcaccc acggcgctcg cgcttcgccg
     6661 gcacgcagac tgatatccga gagccgcttg gccggcgtaa ccgccagtgc cttcggcaag
     6721 gtttttgcgg tcttgggcgc gcgaatggcg gccagcgcac cgaccttgcc gctgccctgc
     6781 cgttcaagaa aacgcgcgaa cgagcgcacg cccgccagcg atcgcatcag ggatcgtccg
     6841 gaagcgccct gacctcggcg atgcgccatg aaggcgcgaa catcctgggt ggcgagatcg
     6901 cgcagggccg cgagcgtcac ccggcagcca agatgcatcg ccaggaagtc gaggaattgc
     6961 ctaacatcgc gatgataggc atcgacagtc ttggccgaca tccgccgctc agcgccgaga
     7021 tgcgcgagcc actgactgat ttccgccgcc acctcgggcg ccgcgaaggg cagttcgtca
     7081 gatttcgtga gttcgcccac gacaggaccg gaatcctttg agtcttgaca cccagtgggt
     7141 tatcgcaccc ctttcgtgtc ggcttcatta acacgccgaa tcggctccga gccatggcaa
     7201 aacgcatcgt cgacgtgctc attccggtgg cgcttgacca tgcctattcg tatcgggtgc
     7261 cagatggatg ggagctcgcc cccggcgatc tcgttcgggt gcccttgggt ccacgcgaat
     7321 gtaccggggt ggtgtgggcc gacaacccga cccccaatcc gaggctcgac aatcgcctca
     7381 gggatgtggc cgccaagctc catatcccgc cgctgcggcc ggaactgcga aagttcatcg
     7441 actgggtctc cggctacacc ttaagcccgc gcggcatggt ggcgcgcatg gcattgcgga
     7501 tgggcgagca tctcggtccc gagcgcctgc gggtcggcat tcggctcgct ggcccgcccc
     7561 ccgaacggat gacggcggcc cgtgcgcggg tgctacgcct gcttgccgac ggccttgccc
     7621 acggtaagag tgacgccgcc cacgaagccg gcgtttcggt cggggtgatc gacggcttga
     7681 tcgatgaaag cacgctcgaa gttctagaat tgccggcagc gccggtggcg agccctcccg
     7741 atcccgccta cgcggtaccg gatttcacga tcgcccaggc tgacgccagc gcggcattgc
     7801 gcgatgtcgt gcgtaatggc ttttctgtga cgctgctcga cggcgtcacc ggctccggca
     7861 agaccgaagt gtattttgaa gcgatcgccg aagcggtggc gcgcggtcgg caaagcctga
     7921 ttctaatgcc ggaaattgca cttacggggc aatttctcga tcgctttgcg gcgcgattcg
     7981 gggtgcggcc ggcggagtgg cattcggaac tgagcccgcg gcggcgctcc cgcacctggc
     8041 atgcggtggc ggggcgcgag gtcagcgtga tcgcgggtgc gcgttcggcg ttgttcctgc
     8101 cttacgccga tctcggcctc atcgtcgtcg atgaggagca cgacgccgcc tacaagcagg
     8161 aggatggcgt ccactatcac gcccgcgaca tggcggtggt gcgcggacat atcacaaaaa
     8221 ttccggtagt gttggcctct gcgacgcctt ccatcgagac cgaggtcaac gctcggcgtg
     8281 ggcgctatcg ccggctgcat ctgcctgagc gattcggcgg cgcgcgcctg cccggcatcg
     8341 aagcgattga tctcacccgc gagggcccgc cgcgcggacg tttcgtggcg ccccgtctcg
     8401 ccgaggcggt gaagatcgca ctggagcgcc gggaacaggc gctgctgttc ctcaaccgcc
     8461 gtggctatgc gccgctgacg ctgtgccgta cctgcggctt taggttttcc tgccccaact
     8521 gtgatgcctg gctggtggat caccgcttcc ggcggcagct cgtctgccac cactgcggct
     8581 tcttcacacc acggccgcct tcatgcccga aatgtcaggc cagtgacagt ttcgtggcct
     8641 gcgggccggg cgtcgaacgc cttgaagagg aggctgcagc gctgttcccg aaggcccgta
     8701 tcctggtgtt gtcgagcgac ctgatggcca ccgccgagca catgcgtgaa gaactcaaga
     8761 aaatcgtgga gggccacgcg gatatcgtta tcggcacgca gctggtggct aaagggcacc
     8821 atttcccgaa gctcaatctg gtcggcatcg tggatgccga tctcggcctg agcaatggcg
     8881 atccgcgcgc cgccgagcgc accttccaac tattgcacca ggtcgctggc cgcgccggcc
     8941 gcgaaaccgg acgcggctac gggtatctcc aaacccacca gcccaaccac ccggtgatgc
     9001 gtgcgattat tgcgggggat cgcgaagctt tctatgcgac tgagatcgag gcgcgcgaac
     9061 gcagccacta cccgccattc gggcggctcg cgagcctcgt catctctggg cccgatcggc
     9121 catctgccga gaggttcgca cgccgactcg ccggggcggc gccgtctgag gaggcggtgc
     9181 gggtgctagg ccctgccgaa gccccgatcg cggtcatccg cgggcggcat cggttccggc
     9241 tgctggtgaa ggcaccgcgg agctttgatc tttcaggtta cctgcgcggc tggctagggc
     9301 gtgcgccgaa ggcggataag ggcgtgaggc ttgaggtgga tgttgatccg atgagttttt
     9361 tgtgaggtgg caaggcattt ttcagcgaac accttgaggc ggtcgacctt ggccagcggt
     9421 gtcgagccgc cgcatcagca ttaatcaacc gataagcaca agcgcggatt cgtcggattc
     9481 taacaattgt tccctaacaa cattaaaggc tttgtgccta tcaaatgggt gcgcacccag
     9541 cggttttaac ggacgacccc ggtcgcgcga acggataatc tgtcatgaat gctttactac
     9601 aacttgcgtt gctgtccctc gcgatgctct cctgcgtaac cgtcgcaatt ggcgaaccaa
     9661 tcaagcttaa acttgcctat ttctcatcgg atcgcagcac gacatacctt gcctgcatca
     9721 aacccttcgt cgaggcggtc aatgcggaag ctgcaggcat agagattagc gtctccctga
     9781 gcggagcact cgggaagaat ccgacccaac agctgcaact tgttttggac ggcacagcgg
     9841 acattgcgtt cattgtgccc ggatatacac ctgagagatt tcccgacaac ctcgttgtcg
     9901 agttgcccgg aatgttccgc aacatccgtg aggcgacgtt agtgtacaca cgcctgttgg
     9961 ccggtcgcac cttgcgggga tatgatgatc tcgaggtggt tggggcattc gcgaccgaac
    10021 ccgaaagcat tcatgcccgc ccgcccgtaa tctcgcttga ggacctcaag ggcaagcgca
    10081 ttcgtgccaa caatgcactg caagccgccg ccttggaaaa tttgggcgca attgcggtgc
    10141 aaatgccgat caaccaggca tcatcaggac tcagcagcgg caagattgac ggggcgaccg
    10201 tatcgccggc gccgttgatc gaattcggca tttcgcgtct tgcggcacat cactaccttc
    10261 ttggtattgg agccgcgccg ttggcggtcg tcatgaaccg cacaaaattt gacagcctgc
    10321 cagggccaag ccaggacgcc attcgcaaat tcggcggtga atgggccgcc gagcactaca
    10381 tcgcgacgta cggtgcggaa aatgagcgcg gtctcgagcg gttgagatct gagcccaacc
    10441 gtacggtgac cgtcccgtcc gaggcggatt tgaggcacgc ccgcgctgca tttggtgcgg
    10501 tgatcgaaaa gtggttggct ggcgatccgc gaaatcgtga gttgctgacg aaggcggagg
    10561 cggaaatcgc caagattcgg tcaggctcct gagggacatg aagcctctcc ttaatatgtc
    10621 gctcaggcgc ggcgtccttt tgctgatgat cgcctcaagc actgtcatcg gaggcacatc
    10681 tgctgtcgtg aagatagcga ccgagcattt gctgtaccgg gatgcaactt cgacggccca
    10741 gaactgggcc cggctgttag cagagagcgt cagcgacctt gagcagattg ccgg
//
LOCUS       DATILV010000285        10417 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2112669, whole genome shotgun sequence.
ACCESSION   DATILV010000285 DATILV010000000
VERSION     DATILV010000285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10417)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10417)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10417
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2112669"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..544
                     /locus_tag="VLJ17_06505"
     CDS             <1..544
                     /locus_tag="VLJ17_06505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22664.1"
                     /translation="DNRRSPGYRRVEPDLAGNVFYGFVGEHVTGRYSKAHAHASAAVL
                     VCIKGKGYTYTWPRSIGMTPWQDGKEKEIFRQDYEPVGLVTAAPYGGDWFHAHFGISR
                     DPLRLIGWYGPNNHRKDKAGVPGEKDTDEGAIDVTEGGTAIPYWLEDPFLRKEYEETL
                     RREGVVSQMEEALYRAPATA"
     gene            557..1066
                     /locus_tag="VLJ17_06510"
     CDS             557..1066
                     /locus_tag="VLJ17_06510"
                     /inference="COORDINATES: protein motif:HMM:NF042488.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6644 family protein"
                     /protein_id="HSV22665.1"
                     /translation="MNAFLAFVEGSDLSNWIRGDSMLAFPTIITLHTICMGFLAGTSS
                     AIDLRILGVATGIPLDSLRPFYPLMWVAFVVNAVTGVLMVIGYPTKQLTNPLFYIKLS
                     LVALGVWLVYRIGTEVLRSTGSDQKAITVRAKWLAVASLAGWVSLIITGRLLEYTHRW
                     ELQGIPALT"
     gene            1082..1591
                     /locus_tag="VLJ17_06515"
     CDS             1082..1591
                     /locus_tag="VLJ17_06515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22666.1"
                     /translation="MDEIAPWEQFIRGTALHHFVYLYEPWLWPTCEILHYLGLSLLLG
                     TVGLFDLRVLGIAKGIPPGAIHRLIPWGVGGYILNVLTGILFFSGHPDQYFYNDAGRL
                     KALFMAVAGINILVFYGSTAFPDMKKLAPGADAPTRLKVIAGVSLAMWVGVLICGRML
                     TWFRPPFFH"
     gene            complement(1625..2467)
                     /locus_tag="VLJ17_06520"
     CDS             complement(1625..2467)
                     /locus_tag="VLJ17_06520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018430785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HSV22667.1"
                     /translation="MRIRSLLYVPVSSERFLAKAHQRGADAIILDLEDAVVPAKKDAA
                     RARLGEAVAMARRGGATIFVRVNAEPDRIQLDAEAACRAGADGLLVPKARGARTIAAL
                     ADFLDGIERTISRKAMSLVPMIEDPGAVLDARAIAIASPRVFALVTGGEDLVTALGAE
                     PTPEVLRFPKLMVHIAAKAAGIRSFGLLRTVADYNDLEGIETSAREARRHGFDGASCV
                     HPAVVPILNRAFSPTPAELDHARALVVAADAAQAAGYGAFEFEGRMVDEPVVQRAREL
                     IEKA"
     gene            2597..3328
                     /locus_tag="VLJ17_06525"
     CDS             2597..3328
                     /locus_tag="VLJ17_06525"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008973541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008725 - DNA-3-methyladenine glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HSV22668.1"
                     /translation="MQHFATIRARAAKRKGGDAKLMALLPKVKSAAALARIKDDRLLS
                     DMTKRIFSAGFAWSVIEKKWPGFEAAFLGFEPKRLLAQSDEFWERLASDPRIVRNAQK
                     IMAVRANAQFISDIAGEHGSFGKFLAQWPPADQVGLLDLLAKRGARLGGRTGQFFLRF
                     IGKDCFVLSMDVVACLRASGLDISENPSSKKDLRRIQEQFNAWAEETGLPLTHLSRIC
                     AMSIGENYDLTTPRNRSNMVEGDTH"
     gene            3325..4185
                     /locus_tag="VLJ17_06530"
     CDS             3325..4185
                     /locus_tag="VLJ17_06530"
                     /inference="COORDINATES: protein motif:HMM:NF024844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase N-terminal
                     domain-containing protein"
                     /protein_id="HSV22669.1"
                     /translation="MNDAALTKDWLGRTRRDEDEITLGAVQRLAATLDQDPTVFRRGS
                     EMPESWYAILFTPIARESTLQPDGHLVTGDFLPPLHGTRRMFAGRRTKFIKPLKIGDM
                     VRRVSTLTRAEPKTGRTGSFTLVTVVHEISGPAGLALTEEQDIVYRAAVETGTVAAQR
                     EAARVTEKPTWSTPIELDPVLVFRYSALTFNAHRIHYDLPYARDVEGYPALVMNGGLT
                     ALLLIETARPHLSRPIIAYAARALSPLFVGQRVVFNGRLAGDTAALWASGPDDGLAYR
                     VDVTLAATTT"
     gene            4182..5390
                     /locus_tag="VLJ17_06535"
     CDS             4182..5390
                     /locus_tag="VLJ17_06535"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HSV22670.1"
                     /translation="MSGGALAGIRVVDLTTVVVGPTATLYLADYGADIIKVEAPGGDL
                     LRTLGGQSKSGELSGKFMHFNRNKRSLVLDLKQERGRGALHRLLETADVFIANVRPAA
                     LERLGLGAGSLRERHKRLIVCNLMGFGRSGRYRDRPAYDTIIQGLAGVADCNRRATGE
                     PRYVPMVFADHLVGLIAAQCVMAALLWRERTGEGQAIEVPMFENMAAFVLAEHMGDLT
                     FVPPRGRSGDLRVLDPMGKPVATQDGYICVSANTDAQVFALFDAIGRPELKDDPRFSS
                     VKARLANIRAYFDVRAESFRTRTTAEWIDILAKADIPAGQMHTLDSLVADEHLADVGF
                     FREIDHPVEGKIVDMQFSNRFSAGGREDYFPPPLLGGDSIAILREIGYGSEDIDDMIK
                     SKVTVDRRKS"
     gene            5480..6628
                     /locus_tag="VLJ17_06540"
     CDS             5480..6628
                     /locus_tag="VLJ17_06540"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV22671.1"
                     /translation="MRQTLVPICTAMAALTPLAATPAASQQELPSEWTLCINEGKVYA
                     PDIAADGCTAVIRSGKRMPRELAVAFTNRGLAYRALGDFDRAVADYDSAIKLDPSYAP
                     AFNNRGAARRDKGEYDRAIADYTEAIRIDPRNAVVLTNRGAAWRDKGDLDRAIADYDE
                     AIRINPEYATALTSRGNAYREKGDMDRAAADYEAAIAVDPSNAIAFNNRGAAYLVKGD
                     LEHALVYYSEAIRLNPDYALAFNNRGIAWRDKGDLDLAVADFGEAIRLNPRFGAAMVN
                     RANAWRDKGEFDRALADYGDAIKLNPRNSFAFRSRGLARLRSGEFEGSIADFDAALAL
                     NPKLAEALYGRGIAKRKYGDPAGADADVAAAKAIRPDIAQEFALSEIE"
     gene            complement(6752..7804)
                     /locus_tag="VLJ17_06545"
     CDS             complement(6752..7804)
                     /locus_tag="VLJ17_06545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22672.1"
                     /translation="MNTIGNLVGLLFGCIAALPIAPASAQPPDVPADSRYADKPPVLS
                     LRTRIPLPGVYGRIDHYGWDSKRGNLIVSALGNDTVEIVNSWRRFHTITGLEHPQASV
                     YVPGVDRIAVSSQSGKLRFYDAGTFALVKTLDFGANADTDNMRYDPLSKYLYVGFGTG
                     ARGALAIVDPVAMERLQEFKVGSHPESFQLETDGPRIFVNLPDQESIGVIDQKTGAVT
                     KWKIPGHSNVHALALDEANHRLFAASLQPGRLTVVDTQTGQVVATLACVLGVDDLWFD
                     PARKRIYAPGAGAIDIFQQVDPDRYTALARIQVGAGAGSTSFHLKTRTQDSLFMSWPN
                     MLPQGGSEVLLFYVND"
     gene            complement(7806..8321)
                     /locus_tag="VLJ17_06550"
     CDS             complement(7806..8321)
                     /locus_tag="VLJ17_06550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22673.1"
                     /translation="MRIPMADPATALMRVAALNKRYGDQRALADVSCAANAGEVLGLI
                     PTVPARRRCLKPPRVPVDSCEVHCGDRAPTQAGRRRVLSPRRGATPTKWVLEFFTGAY
                     RRSRSEIATAARRTGAGAAGTTRRIIEGICTPDDMLAPIAPHPFGAYGPDLKRTRQMM
                     GLPREQASLGD"
     gene            complement(8399..8896)
                     /locus_tag="VLJ17_06555"
     CDS             complement(8399..8896)
                     /locus_tag="VLJ17_06555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HSV22674.1"
                     /translation="MMERSIGVGTLALAIGIVVQATAALAQNEDRVKAGLTMWRNSGC
                     ADCHGAFADGEKQRDEAPTGANLRTTRLDAAALKQTIGCGRPGTGMPAFDEGAYTVRP
                     CNGQALGPPPSDLYPAPRTLTPDEIDAVVTYLQARIVGKGKTITKQECLFYYADQPDW
                     CDDYK"
     gene            complement(8893..10278)
                     /gene="chrA"
                     /locus_tag="VLJ17_06560"
     CDS             complement(8893..10278)
                     /gene="chrA"
                     /locus_tag="VLJ17_06560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate efflux transporter"
                     /protein_id="HSV22675.1"
                     /translation="MAAPAAIPASREFPSIREASRVWLKVAALSFGGPAGQIAVMHRI
                     IVEEKKWVSEARFLHALNYCMLLPGPEAQQLATYIGWLMHRTLGGVIAGGLFVLPGII
                     AIMALSYVYAAFGNVPLVAALFFGLKAAVLAIVLEAVFRIGKRALKNNILVSLAAGAF
                     VGIFFFDVPFPLIVFGAALIGYVGAVSGTAAFQGGSGHGGSEVDGATDSLLGEALPEH
                     TRPSIARALRIPGVWLGLWLLPVIAIVSTLGAADVFSQIAIFFSKMAMVTFGGAYAVL
                     AYVAQQAVEGYGWLKPGEMLDGLGMAETTPGPLIMVLQFVGFMAAYRDPGTLSPMLAG
                     TLGGLLATWVTFTPCFLWIFLGAPFVETLRGNKALAGALSAITAAVCGVILNLAVWFA
                     IHTIFRNVVPIRSYGLSFDAPVPASADIWALALTVAAILAIFRFKLGMIPTLAGACAL
                     GIVLFSVGVLT"
     gene            complement(10292..>10417)
                     /locus_tag="VLJ17_06565"
     CDS             complement(10292..>10417)
                     /locus_tag="VLJ17_06565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018859228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HSV22676.1"
                     /translation="RMYAEDLAQLEAGMTLYDAFYRWCRDATEETHTWHSKKPGA"
BASE COUNT         2008 a         3246 c         3209 g         1954 t
ORIGIN      
        1 cgataaccgc cgttcgcccg gctacaggcg ggtggagccc gaccttgccg gcaacgtgtt
       61 ctatggcttc gtcggagagc acgtgaccgg gcgctactcc aaggctcacg cccacgcttc
      121 ggctgctgtc ctggtctgca tcaagggcaa ggggtacacc tacacgtggc cgcgctcgat
      181 cggcatgacg ccatggcagg acggcaagga aaaggaaatc ttccgtcagg actatgagcc
      241 ggtcggcctc gtcaccgcgg ctccctatgg gggcgactgg ttccatgccc atttcggtat
      301 cagtcgcgat ccgctgcgcc tgatcggctg gtacggcccc aacaaccatc gcaaagacaa
      361 ggccggcgtc ccgggcgaaa aggacaccga cgagggggcg atcgatgtga ctgagggcgg
      421 caccgccatt ccgtactggt tggaggaccc gtttctgcgc aaggaatacg aggagacctt
      481 gcggcgcgaa ggcgtcgtct cacaaatgga ggaagcgctg taccgagcgc ctgctacggc
      541 gtgaaaggga tgatccatga atgcgttcct cgcgtttgtc gaaggcagcg atctcagcaa
      601 ctggattcgc ggtgactcca tgctcgcttt tccgactatc atcaccctgc atacgatctg
      661 tatgggattc cttgccggca cgagctctgc catcgacctg cgcatcctgg gtgtggcgac
      721 cggcattccg ctcgattcgc tgcgaccgtt ctacccgctg atgtgggtgg cgttcgtcgt
      781 caatgccgtg accggcgtgt tgatggtgat cggctatccg accaagcaac tcacgaaccc
      841 attattctat atcaagctgt ccctggtcgc gctcggggtc tggctcgtct atcgaatcgg
      901 cacagaggta ttacgctcga cgggatcgga ccagaaggcg ataactgtgc gcgccaagtg
      961 gttggctgtg gcctcgctgg ccgggtgggt gagcctcatc attacgggcc ggctccttga
     1021 atacacacac agatgggagt tgcagggaat cccggctctc acctaaccgg ggaattgcat
     1081 catggatgaa atcgccccgt gggaacagtt tatccgcggt accgccctgc accacttcgt
     1141 gtacctctat gaaccttggc tgtggccgac ctgcgagatt ctgcattatt tggggttgtc
     1201 tctgctgctc ggcaccgtcg gcctgttcga tttgcgtgtg ctcggcatcg ctaagggcat
     1261 tccgccaggt gccattcacc ggctgatccc ctggggcgtt ggcggctata ttttgaacgt
     1321 cctgaccggc atcctgttct tttccggcca tccggaccag tatttctaca acgacgcagg
     1381 ccgcttaaag gcgctgttca tggccgttgc cgggatcaac atcctggtct tttacggcag
     1441 cacggctttc ccggacatga agaaactggc gcctggcgct gatgctccga cccgcctcaa
     1501 ggtcatcgct ggcgtttcgc tcgcgatgtg ggttggggtg ctgatttgcg gtcggatgct
     1561 cacttggttc cggccgccgt tttttcattg attggccctt tacgctaaca cccatgatcg
     1621 cgcgtcacgc tttttcgatg agctcgcggg cgcgttgcac caccggctca tcgaccatgc
     1681 ggccctcaaa ttcgaacgcc ccatagccgg cagcctgcgc cgcgtcggct gccaccacca
     1741 aagcccgggc atggtcgagt tccgccggag ttggcgagaa ggcgcgattg aggatcggga
     1801 ccacggccgg atgcacgcag ctcgcgccgt cgaagccgtg gcgccgcgcc tcgcgcgcgg
     1861 atgtctcgat cccctcaaga tcgttgtaat ccgcgacggt gcgcaacagg ccgaacgagc
     1921 ggatgccggc tgccttggcg gcaatatgca ccatcagttt gggaaaccgg aggacctcgg
     1981 gcgtcggctc agcgccgagc gcagttacga gatcctcacc gccggtgacc agcgcgaaga
     2041 ctcgcgggct agcgatcgcg atggctcggg cgtcgagtac cgcgccgggg tcctcaatca
     2101 tcggcaccag cgacatcgcc ttgcggctaa tggtccgttc gatgccgtcg agaaaatctg
     2161 ccaaggcggc gatcgtgcgc gccccgcgcg ctttcggcac caacaagccg tctgcgccag
     2221 cccggcaagc cgcctcggca tcgagctgga tgcggtcagg ctccgcattg acacgcacga
     2281 atatggtggc gcccccgcgc cgcgccatcg cgacggcctc gccaagccgt gcccgcgcgg
     2341 cgtccttttt agccggaaca accgcatctt cgagatcgag aatgatggcg tcggcaccgc
     2401 gctgatgggc cttggccaga aatcgctcgg aactcaccgg aacgtaaagc agagatcgaa
     2461 tgcgcaatgg cggctcccga gattgccaag tttctgaaag ccacgatagg acgtcaaact
     2521 gagccgcggt aggggcctgg ctttacgatc gacgacctca aggcgtatga cgtcgaaggt
     2581 ccataccgag attcccatgc agcatttcgc caccatccgg gcgcgggcgg ccaaacgaaa
     2641 gggcggcgac gccaaactca tggcgcttct accgaaggtc aagagcgcgg cggcgctcgc
     2701 ccgaatcaaa gacgatcggc tgctatcgga tatgacgaag cggatttttt cggctggttt
     2761 cgcgtggagc gtaatcgaga aaaagtggcc aggcttcgaa gcggcattcc tcggcttcga
     2821 gccaaaacgc cttctggcgc agtccgatga gttctgggag cgcttggcaa gcgaccctcg
     2881 catcgtgcga aatgcccaga aaatcatggc ggtgcgcgcc aacgcccaat ttatttccga
     2941 tattgcgggc gaacatggga gcttcggcaa gtttctcgcc caatggcctc ccgccgatca
     3001 ggtcggtttg ctcgatttgc tggcaaagcg gggcgctcgg ctcggtggac gcacaggcca
     3061 gttctttctg cgtttcatcg gcaaggactg ctttgtcctg tcaatggacg ttgtcgcctg
     3121 tctgcgggct tccggcctcg atatctcgga gaatccgagt tcgaagaaag accttcgaag
     3181 aatacaggag cagttcaacg cctgggctga ggagaccggg ttacccttga cacacttatc
     3241 gcgcatctgt gcgatgtcga taggcgaaaa ctatgaccta accacgcctc gcaaccgatc
     3301 caacatggtg gagggagaca cccattgaac gacgcagcct tgaccaaaga ctggctcggc
     3361 cgcacccgac gcgacgagga cgaaatcacg cttggcgccg tccagcggct tgccgcgacg
     3421 ctcgatcagg acccaacggt cttccgtcgc ggcagtgaaa tgccggaaag ctggtacgcg
     3481 atcttgttta ctccgatcgc tcgggaaagt acgctgcagc cggacggcca cctcgtgacc
     3541 ggggatttcc tgcccccgct gcacggcaca cggcgaatgt ttgccggtcg acgcacaaaa
     3601 ttcattaagc cgctgaagat tggcgacatg gtcaggcgtg tctcgacatt aacgcgcgcc
     3661 gagccgaaga ccgggcgcac cggatcgttc acgctcgtga ccgtcgtgca cgaaatcagc
     3721 gggccggccg gcctcgccct cacggaggag caggacatcg tctaccgcgc cgcggtcgaa
     3781 accgggacgg ttgcggcgca gagggaggcc gcgcgggtga ccgagaagcc gacatggtca
     3841 acgccgatcg aactcgatcc ggtgctggtg tttcgctatt cggcgcttac cttcaacgcg
     3901 caccgcatcc actacgacct gccctatgca cgcgacgtcg aggggtatcc ggcgttggtg
     3961 atgaacggcg gtcttacggc gctattgttg attgagaccg cccgcccgca tctatcgcgc
     4021 ccgattatcg cctatgcggc acgcgccctg agcccattgt tcgtcggcca gcgcgttgtc
     4081 ttcaacggac ggcttgccgg cgacactgca gcactgtggg cttcgggtcc cgacgacggc
     4141 ctcgcctata gggtcgacgt cacgcttgcg gccactacga catgagcggc ggcgcgctcg
     4201 ccggcatccg cgtggtcgac ctcaccaccg tggtggtggg gccgaccgca acgctttatc
     4261 ttgcggacta tggcgctgac atcattaagg tggaggcacc tggcggcgat ctgctgcgca
     4321 cgctgggagg tcaatcgaag agcggcgagc tttccggcaa attcatgcat ttcaaccgca
     4381 acaagcggtc gctcgtgctc gacctcaagc aggaacgtgg ccgcggagca ctgcaccgcc
     4441 tgctcgagac cgccgacgtt tttatagcca atgtgaggcc ggcggcgctg gagcggctcg
     4501 ggctcggcgc tggttcactc cgagagcgac acaagcgtct catcgtgtgc aatctgatgg
     4561 gttttggacg cagtggtcgc tatcgcgacc ggcccgctta cgacaccatc atccagggcc
     4621 tcgctggcgt cgccgattgc aaccgccgcg ccaccggaga gccgcgctac gtgccgatgg
     4681 tatttgccga tcacttggtc ggccttatcg ccgcgcagtg cgtcatggcg gcgctcctct
     4741 ggcgcgagcg caccggggaa ggccaggcga tcgaggtgcc gatgtttgag aacatggccg
     4801 cttttgtgct cgccgagcac atgggtgacc tcaccttcgt gccgccgcgc ggccggagcg
     4861 gagatttgcg tgtgctcgac cccatgggta agcccgtcgc cacccaagac ggctatatct
     4921 gcgtttctgc caacaccgat gcccaggttt ttgcgctgtt cgacgccatc ggccggccag
     4981 aactgaaaga cgatccacgc ttctcctccg tcaaggcacg gctcgccaac atacgcgcct
     5041 atttcgatgt ccgtgccgaa agctttcgca cccggaccac ggccgaatgg atcgatatcc
     5101 tcgccaaggc cgacatcccg gccggccaga tgcacaccct cgacagcctg gtggcggacg
     5161 agcacctcgc tgatgttgga ttttttcgcg agatcgacca tccggtcgaa ggcaagatcg
     5221 tcgacatgca attctccaac cgattttccg ccggcggtcg cgaggattac tttccgccgc
     5281 cactgctcgg cggcgacagc atcgcgatcc tgcgcgaaat cggatatggc agcgaagata
     5341 tcgatgacat gataaagtcc aaggtgacgg tcgaccggcg caaatcttag atgcccgcaa
     5401 tggtcggtac ttgcaaaacc ggcccaacgg gcgataagcc gtgttatatt gtcctcacag
     5461 gtacttgcag gaaatttcga tgcgccaaac tctcgttccg atctgcacgg cgatggccgc
     5521 cttaaccccg ctggccgcaa cgcccgcggc gtcgcagcag gaactgccgt ccgaatggac
     5581 gctatgcatc aacgaaggca aggtctatgc gcccgatatc gcggcggacg gctgtacggc
     5641 cgtgatccgg tccgggaagc ggatgccgcg ggaactcgca gtcgccttca ccaatcgagg
     5701 ccttgcctat cgagccttgg gcgatttcga ccgtgcggtt gcggactatg attcggccat
     5761 caagctcgat cccagctatg cccccgcgtt caacaaccgt ggcgcagccc gccgcgacaa
     5821 gggcgaatac gatcgcgcca ttgcggatta caccgaggcc attcgtatcg atccccgcaa
     5881 tgcggttgtc ttgaccaacc gcggcgctgc ttggcgggac aagggcgatc ttgaccgtgc
     5941 catcgcggat tatgacgagg cgatccgcat aaaccccgag tacgcgaccg cgttaaccag
     6001 ccgcggcaat gcgtatcgcg agaaaggtga tatggaccgc gccgctgcgg attacgaggc
     6061 cgccatcgcg gttgatccga gcaatgcgat tgcgttcaac aatcgcggcg ctgcctatct
     6121 ggtgaagggc gatcttgagc acgcgctggt ctactattcg gaagcaatca ggctcaatcc
     6181 cgactatgcg ctcgcgttca ataatcgcgg catcgcttgg cgcgacaagg gcgatctcga
     6241 tctcgcggtc gcggatttcg gcgaggcgat caggctcaat ccgcgtttcg gcgccgccat
     6301 ggtcaaccgc gccaatgcgt ggcgcgacaa gggagagttt gatcgcgcac tggcggacta
     6361 tggcgatgcg ataaagctca atccgagaaa cagctttgcg ttcaggagtc gcggcttggc
     6421 gcgtctgcgg tcgggcgagt tcgaaggctc gattgcggat ttcgatgcgg cgctcgccct
     6481 caacccgaag ctcgcggagg cactttacgg gcgcggcatt gcgaagcgca agtacggcga
     6541 tccggcgggc gccgatgccg acgtcgcggc cgcaaaagcg atccgaccag acatcgcgca
     6601 agagtttgcg ctgtcggaga tcgaatgagg tgctgcgtcc agccccatca aggttggcat
     6661 tccggggcgt gtgcgtagca cgcgaggaat ccataagcca agatgatcga tttccgggtt
     6721 cgccaccggt ggcgcgcccc gaaatgacgc gctaatcatt cacgtagaat aacagcactt
     6781 ccgagccgcc ctggggcagc atgttgggcc aggacatgaa caggctgtct tgggtgcgcg
     6841 tcttgaggtg aaagctggta cttcccgcac cggccccaac ctgaatgcgc gccaatgcgg
     6901 tgtagcggtc cgggtcgacc tgctggaata tgtcgatcgc gcctgctccg ggcgcataaa
     6961 tgcgcttgcg cgctggatcg aaccataaat cgtcaacacc gagtacgcag gcaagcgtgg
     7021 cgacgacctg gccggtttgc gtatccacca cggtcaatcg cccgggctgg agcgaagcag
     7081 cgaacagccg atgattggct tcgtccaatg ccagcgcatg gacgttgcta tggcctggga
     7141 ttttccattt cgtcaccgcg ccggtcttct ggtcgatcac cccgatggat tcttggtccg
     7201 ggaggttcac gaatatccgc ggcccgtccg tttccaattg aaacgattcc ggatggctac
     7261 cgaccttgaa ttcctgtaga cgttccatcg cgaccggatc gacgatcgcc aatgcaccgc
     7321 gtgcaccggt gccaaagccc acataaagat acttcgacag cggatcgtag cgcatgttgt
     7381 cggtatcggc gttggcgccg aaatccagcg ttttgacgag ggcaaaggtc ccggcatcat
     7441 agaagcgtag cttgccggat tgactcgaca ccgcgatccg atcgacgccc ggcacgtaga
     7501 cggaggcctg tgggtgttcc aggcccgtaa tggtgtgaaa ccgtctccac gaattgacga
     7561 tctcgacggt atcgttgccg agcgccgaga cgatcaggtt gccgcgcttg ctgtcccatc
     7621 cgtagtgatc gatgcgcccg tacacgcccg gcaacgggat gcgggtgcgc aacgacagga
     7681 ccggcggctt gtcggcatag cgcgaatcag ccggcacatc cggaggctgc gcggatgcag
     7741 gggcgatcgg caacgcagca atgcagccga acaacaaccc gacaagattt ccgatcgtat
     7801 tcattctaat ccccgaggga ggcctgctcg cgcggcagcc ccatcatctg ccgcgtccgc
     7861 ttcaaatcgg gtccataagc accaaacgga tgcggtgcga tgggcgccag catatcatcc
     7921 ggtgtgcata tcccttcgat aatgcgacga gtcgttcccg cagcaccggc gccagtccga
     7981 cgggccgctg tcgcaatttc ggagcgagag cgacgatagg cgccggtgaa aaattccaag
     8041 acccacttgg tcggggtcgc accccgtcgg ggagatagaa cccgacggcg tccggcctgc
     8101 gtcggcgctc ggtcgccgca atggacctcg caagagtcga ccgggacccg cggcggcttc
     8161 aagcaacgtc gtcttgccgg gaccgttggg atcagtccga gcacctcgcc ggcattcgcc
     8221 gcacaagata cgtcggcaag cgcgcgctga tcgccatatc gcttgttcag cgccgcgacc
     8281 cgcatcaatg ccgttgcggg gtccgccatg ggaatgcgca tgcgggcaca atgttcactc
     8341 cctcgcctct ttgcaaagcg cccagggacc ggacacctgc ggcaaatgtg ctttggattt
     8401 atttatagtc gtcacaccag tccggttggt cggcgtagta aaacaggcat tcctgtttcg
     8461 tgatggtctt gccctttccg acaatgcgcg cctgaagata ggtgacgacc gcgtcgatct
     8521 cgtccggggt gagggtgcgc ggcgctggat aaaggtcgct cggaggtggc cccagcgctt
     8581 gcccgttgca cggcctgacc gtgtaggcgc cctcgtcgaa ggcgggcatt ccggtgccgg
     8641 ggcgtccgca gccaatcgtt tgtttgagtg ccgcggcatc gagcctggtg gtccgcagat
     8701 tggcgccggt cggcgcttca tcgcgttgct tttcgccgtc cgcaaaagcg ccatggcaat
     8761 cggcgcatcc gctgtttcgc cacatcgtta ggccggcctt gacgcggtcc tcgttctgcg
     8821 cgagcgcagc tgttgcctgc accacgatac cgatcgcaag agccagtgtg ccaacaccaa
     8881 tacttctttc catcatgtca gaaccccaac gctgaaaagt acaattccca acgcacaagc
     8941 ccccgcgagc gtcggtatca ttccgagttt gaaacgaaaa atcgccagga tggcggcgac
     9001 ggtgagcgcg agcgcccaga tgtcggcgct cgccgggacc ggtgcgtcga acgacaagcc
     9061 gtaactgcgg atcgggacca cgttgcgaaa tatcgtgtgg atcgcgaacc agaccgccag
     9121 attgaggata acgccgcaga ccgcggccgt gattgccgac agcgcgccgg cgagcgcctt
     9181 gttgccacga agcgtctcga caaacggcgc gccgagaaag atccacagga agcagggcgt
     9241 gaacgtcacc caggtggcga gcaatccgcc cagcgtgccg gccagcatgg gcgacagcgt
     9301 gccgggatcg cgatatgccg ccatgaagcc aacgaattgc agcaccatga tcagcggacc
     9361 gggtgtggtt tccgccatgc caaggccgtc cagcatttcg ccgggtttga gccagccgta
     9421 gccctcgacc gcctgctggg ccacgtaggc aagcaccgcg taggccccgc cgaacgtcac
     9481 catcgccatc ttgctgaaga aaatcgcgat ctggctaaag acgtcggcgg cccccaacgt
     9541 cgacacgatc gcgatcaccg gcaggagcca aagtcccagc caaacgccgg ggatccgcaa
     9601 ggcgcgcgca atcgaggggc gcgtgtgttc gggaagggct tcgccgagca agctgtcggt
     9661 tgccccatcc acctcgctgc cgccgtgtcc ggagccgccc tggaacgccg cggtgccgct
     9721 gacggcaccc acatagccga tcaatgcagc gccgaacacg atgaggggaa acggaacatc
     9781 gaaaaagaag atgccgacga acgctcccgc tgccagcgaa accaggatgt tgttcttgag
     9841 ggcacgcttg ccgatccgga agaccgcttc caggacgatg gccagcaccg cggccttaag
     9901 gccgaagaac agtgccgcca cgagcggcac gttgccgaag gctgcgtaga catagctgag
     9961 cgccatgatg gcgatgatgc cgggcagcac gaacagcccg cccgctatca caccgccgag
    10021 tgtacggtgc atgagccatc cgatataggt agcaagctgt tgggcttccg gacccggcag
    10081 cagcatgcaa tagttgagcg catgcagaaa ccgggcttcc gaaacccact ttttttcttc
    10141 tacgataatg cggtgcatga cggcgatctg gccagccggt ccaccgaaac tcagggccgc
    10201 caccttcagc cacacgcggg atgcctcacg gattgaggga aattcgcgcg acgccgggat
    10261 tgcggccggt gcggccaatg cttcggacaa gtcaggcccc cggtttcttt gaatgccaag
    10321 tatgggtttc ttccgtggcg tcgcggcacc accggtagaa tgcgtcgtag agtgtcatcc
    10381 cggcttcgag ttgcgcaagg tcttccgcat acatgcg
//
LOCUS       DATILV010000286         3022 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1857113, whole genome shotgun sequence.
ACCESSION   DATILV010000286 DATILV010000000
VERSION     DATILV010000286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3022
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1857113"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..252)
                     /gene="tnpA"
                     /locus_tag="VLJ17_06570"
     CDS             complement(<1..252)
                     /gene="tnpA"
                     /locus_tag="VLJ17_06570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000604943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HSV22677.1"
                     /translation="MEANPAWGARRRGRHCVFALHAHLVFVTKYRRKVFSKDVLDDMR
                     GVFASVCTDFEAELIEMDGEDDHVHLLVNYPPKIPLTKLV"
     gene            574..720
                     /locus_tag="VLJ17_06575"
                     /pseudo
     CDS             574..720
                     /locus_tag="VLJ17_06575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669073.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
     gene            1550..>3022
                     /locus_tag="VLJ17_06580"
     CDS             1550..>3022
                     /locus_tag="VLJ17_06580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV22678.1"
                     /translation="MTTMTQTSTVGAGMTSEEKFVIFASSLGTIFEWYDFYLYAVLAP
                     FFASLFFPAGNDTAALLSAFATYAAGFLVRPFGAIIFGRIGDLVGRKYTFLITILVMG
                     TSTFLVGLLPTYSSVGWTAPILLVTLRLLQGLALGGEYGGAATYVAEHSRPGERGYAT
                     SWIQTTATVGLFLALLVIGLCREFMDGKTFTENGWRIPFIVSVILLIFSVYIRLKLNE
                     SPIFQKMKEEGKGSRAPLTESFLHYPNNKYVLLALIGATAGQGVVWYTGQFYALFFLT
                     ITLKLNYVLAYMIIGMSLIIGTPFFVFFGWLSDRIGRLKIILAGCLIAALTYFPLFQA
                     LTHYVNPDLESFSQRNPVTVTADTSTCEVHIFVTGLTKFTPCDRAKDFVTKLGLSFKT
                     ENQSGAGDKVTLAIGSTKLEGFDAAKWNQAFLDAGYPNLQKDKDGKIVPKDASSANVN
                     WGMTLLILTIMVVYVTMVYGPIAAFLVELFPTKIRYTSMSL"
BASE COUNT          586 a          950 c          863 g          623 t
ORIGIN      
        1 gacaagtttt gtgagaggaa ttttcggcgg atagttcacg agtaaatgca cgtgatcgtc
       61 ttcgccgtcc atctcgataa gctccgcctc aaagtcggta cacacgctgg cgaacacgcc
      121 gcgcatatcg tcgagcacgt ctttagagaa caccttgcgg cggtatttgg tcacaaagac
      181 caaatgagca tgaagcgcga agacgcagtg cctaccgcga cgtcgggccc cccaagccgg
      241 attggcctcg atcaaccgca cacggtgtgc gtggccgaga agggcgcgca gcgttgccgc
      301 cgagcgtgac gccgtgcctg cgccttcggt tgtgcgtccg ccacggcctc ttcgatgctt
      361 cgtcttggca gtcttgcccg aggcaatgtc cgcctgcatc gtcaatatcg agaaggtcgc
      421 gggcgcttcg cgatcccagc agcggcttga tatgcttttc gatccgcctc tcgtgtccat
      481 ccagcgtcga ctttttgatc ggtcggcggt cgcggccaag gatgcgcgcc gcaggacaag
      541 acgtcggaaa aattgcaagg tgccgagcaa gcaagtagcg agcccaaggg acaagaactc
      601 gtctacgcgg cgcgcgtctc gctcgaccgc ccccagatgc aggtcgagaa taagctcgtc
      661 gatctctccc ccggcatggc tgtcgccgtc gaaaccaaga ccggatcgcg acggatcatt
      721 aggtccttcc gcctctcccg cattcccgaa cagatcctaa cggtccggcg cttggcgcgg
      781 tccatgccgg cggctgggcc aatcgacatc cacccctatc agcggcaagg gatatcgtgg
      841 ctgctcgagg tccgccggga ggttcgggga ttccgaccac cagctgcgtt ggaaactttc
      901 cgccctcggc ggccgtggtc gatcggcagg cggggtgact tcgacgcggc ccaggcgcgg
      961 cttgcggccg gtgccaggga aaaagcctcc ggacaatggt ctgcacggcg ctcgcagcga
     1021 aaggccgcac ccgatgtatc tgggatcggc caacgatctc ggccggatga tcgtgatgcc
     1081 ggcatgcggc cgtccgaggc cccaatcgcc ttcgatcacg gcaccgctca cgtcttgccc
     1141 ctccaccatg accggaactc cgggccggcc gggcacgacg atcacgggtt ccgtatgggc
     1201 tccggcgtga ccgatacccg caaggcaccc cagcaccacg atcaagttcc tgcacgcatt
     1261 catcacgatc cgtccggcaa ctgccaaatc tatcatggca ccaaaagccc taatggcgcg
     1321 ttgccgtgag gtttctgcga ggggctgcca cgcagggcgc gacgcgaacc gtcttgcgac
     1381 gcacaattgc ttgctgcgcc gcaaacgaat ttcaacttta gttttaagac cactggggca
     1441 gagacattgc gcaacaggcc caataccttt gcgtacggcg actcgcgaga cgcacagcgg
     1501 cgcgcgggcg atccgaacga agcaaatcca gatcggggga tgaacgccca tgaccacaat
     1561 gacgcaaacg tcgacggtcg gcgctggcat gacgagcgaa gaaaaattcg tcatcttcgc
     1621 ctcatcgctt ggcacgatct tcgagtggta cgacttctat ctctacgcag tattggcgcc
     1681 gttctttgcg tcgctgttct tccccgccgg caatgacact gccgcgctgc tttcggcgtt
     1741 tgccacctat gcggccggct tcctcgtacg tccgttcggc gcgataatat tcggccgcat
     1801 cggcgatctc gtgggccgca aatacacctt cctcatcacc atcctggtga tgggcacgtc
     1861 gacgttcctg gttggcctgt tgccgaccta cagctccgtc ggctggacgg ccccgatctt
     1921 gttggtgacg ctccgcctgc tgcaaggcct tgccctcggt ggcgaatatg gtggcgccgc
     1981 gacctacgtc gcagagcact cacgtccagg cgaacgcggc tatgcgacca gttggatcca
     2041 gaccaccgcg acggtcggct tgttcctggc gctgctcgtg atcggacttt gccgcgaatt
     2101 catggatggc aagacattca cggagaatgg ctggcgcatt cccttcatcg tctcggtcat
     2161 cttgctgata ttctcggtct atatccggct caagttgaac gaatcgccga ttttccagaa
     2221 gatgaaggaa gagggaaagg gttcgagagc cccgctgact gagagcttcc tccactatcc
     2281 caataacaag tatgtgctgc tcgcgctcat tggggcgacc gccggtcaag gggtggtgtg
     2341 gtatacgggc caattctatg ccctgttttt cctaaccatc accctcaagc tcaactacgt
     2401 gctcgcctac atgatcatcg gcatgtcgct gatcattggc acacccttct ttgtcttctt
     2461 cggttggctg tccgatcgca tcggccggct caaaatcatc ctggcgggct gcctgatcgc
     2521 ggcgctgacc tacttcccgc tttttcaggc gctgacgcac tacgtcaatc cggacctgga
     2581 atcgttctcg caacgcaatc cggtgacggt cacggccgat acgtcaacct gcgaggtgca
     2641 tatcttcgtc accggattga ccaagttcac cccttgtgac cgcgccaagg acttcgtgac
     2701 caagcttggc ctgtcgttca agaccgagaa ccaatcgggc gcgggtgata aagttaccct
     2761 ggccatcggc tcgaccaagc ttgaaggctt cgatgccgcc aaatggaacc aggcattcct
     2821 cgacgccgga tacccgaacc ttcagaagga caaggatggc aagatcgttc cgaaggacgc
     2881 cagttcggcc aatgtaaatt ggggcatgac gcttctgatc ctgaccatca tggtggtgta
     2941 cgtcaccatg gtgtatggcc cgattgcggc cttcctggtc gaattattcc cgaccaagat
     3001 ccgctataca tcgatgtcgc tg
//
LOCUS       DATILV010000287         1651 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3388428, whole genome shotgun sequence.
ACCESSION   DATILV010000287 DATILV010000000
VERSION     DATILV010000287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1651)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1651)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1651
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3388428"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(159..1136)
                     /locus_tag="VLJ17_06585"
     CDS             complement(159..1136)
                     /locus_tag="VLJ17_06585"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV22679.1"
                     /translation="MKRRELLTLLGGAAAAWPLVARAPQAATTPRIGWIAIGTPQGSE
                     FFNAFRQGLRQLGYVEGQSIIIEPRWPADIRDRVSELVRELLALDVQVIVAQGAIVPV
                     VRRAIDSTPVVFGYSGDPVEAGLVNSFRRPGGNFTGATFMSYEVNAKRVELLRDAFPH
                     VTRVAILSNPLHPGEQRELKESEQGAERLGIGLSFAQMRSAAEIQPALERIRVAGAEA
                     IIVLPDGLVMQHRKQIIEFAALQRIPVISGWSEFAKSGGTMTYGPNLNVSFERLAVYV
                     DKILKGANPGELAVEQPTKFELVINLKAAKAIGLDVPPMLLGRADEVIE"
     gene            1339..1482
                     /locus_tag="VLJ17_06590"
     CDS             1339..1482
                     /locus_tag="VLJ17_06590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22680.1"
                     /translation="MSKADQFREYAEEAMQWARRSKTENEKQALIELVRTWTQAAQRS
                     DGR"
BASE COUNT          346 a          494 c          480 g          331 t
ORIGIN      
        1 cattctcatc gcctccgtaa gcctcgagcg aggcatcgtt gcggatttaa ccaggacatc
       61 cgaataggtg gtggacgtcc gctatgcctc cgatagcgac cgaattggtg cttcgcaacg
      121 aacggtcgcg atgtgccaat accggaaatg aacaaagctt attcaatcac ctcgtcggcg
      181 cggccaagca gcatcggcgg cacgtcgagg ccgatcgcct tcgccgcctt gagattgatc
      241 accagctcga acttggtcgg ttgctcgacg gccaactcgc ccggattggc gcctttaagg
      301 atcttgtcga catatactgc gagccgctcg aatgacacgt tgaggttggg cccataggtc
      361 atggtgccgc ccgatttggc gaattcggac catccggaaa taacgggaat acgctgcagt
      421 gctgcaaatt caatgatttg cttccgatgc tgcatgacca gcccatcagg caggacgatg
      481 attgcttcgg cgccggcgac gcgtatgcgc tccaacgccg gctggatttc ggcggccgac
      541 cgcatttgag caaaagaaag cccgatgccg agccgttcgg cgccctgctc ggattctttc
      601 agctcgcgtt gctcccccgg atgcaatggg ttcgacaata ttgccacgcg cgtgacgtgc
      661 ggaaacgcgt cacgcaacag ctcgacccgc ttcgcattca cctcgtagga catgaatgtt
      721 gcgccggtga aatttccacc tggccgtctg aagctattca ccagcccagc ctccactgga
      781 tcgccgctgt aaccgaacac cacgggagtc gagtcgattg ctcggcgcac gacgggcacg
      841 atcgctccct gggccacgat aacttgtaca tcgagcgcca gcagttcgcg cacgagttcc
      901 gatacgcgat cacggatgtc agccggccaa cgcggttcga tgatgataga ttgcccctcg
      961 acatagccca actgccgcag cccctgccga aaggcgttaa agaactccga tccttggggc
     1021 gtgccgatgg cgatccatcc gatccgcggc gtcgttgcgg cctgcggcgc gcgagcgacc
     1081 agcggccacg cggctgccgc tccaccgaga agcgtgagga gttcgcgccg tttcatggag
     1141 ttttccaagt tcagcccccg ggctaagcgg ctaagaacct agcacgtcgg cgcatggctg
     1201 tgtcggctct tctccaccgc agagatgtcc gctttgggtc attcgcgact caaagtgagc
     1261 aatcttgaac agtccgctgt ccccgattgg tacagacttc gcgattcggg agggcgggcg
     1321 tcaagggagt ccgccgaaat gtccaaggct gatcaattca gagaatatgc cgaagaagct
     1381 atgcagtggg cacgccggtc caaaactgaa aatgagaaac aagccctgat cgagcttgtg
     1441 cgcacgtgga cgcaagctgc gcagcgcagc gacggcaggt agctaggcag cttgtttgcg
     1501 ggaagcctcg aacgcttcaa gcatctcgac cacgtcgccc attatcctag agtcgatcgg
     1561 ttacgccggc agccatcgcc ggggtgactt tgatggtctg atggatgcgc tctaaactgt
     1621 gaggaaataa ttcaatttga tctcggcggc t
//
LOCUS       DATILV010000288         6569 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4921919, whole genome shotgun sequence.
ACCESSION   DATILV010000288 DATILV010000000
VERSION     DATILV010000288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6569)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6569)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6569
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4921919"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(199..366)
                     /locus_tag="VLJ17_06595"
     CDS             complement(199..366)
                     /locus_tag="VLJ17_06595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22681.1"
                     /translation="MSKRCVALANCAPDGAQSTLFELAAGWLRLATDLDADPMFRERV
                     REVQIFPLVDG"
     gene            complement(818..1510)
                     /locus_tag="VLJ17_06600"
     CDS             complement(818..1510)
                     /locus_tag="VLJ17_06600"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein"
                     /protein_id="HSV22682.1"
                     /translation="MRGIWGLGAVALLTGAASSAFAADLPVKAPPPLLPLPVYNWTGF
                     YIGGNLGGAWSSATLTDNPTGASISGSNSGFIGGGQIGYNWQVSPQFVLGVEWMFDGT
                     NLHKTSNTVNILGNDFQATANTDWITTIAGRFGYAMNNWLFYAKGGGGWAQNSATVTN
                     VTQGLSVGNTNTNAGWLVGAGIEYGLTPNWTMKAEYDYLGLNNWNIDVGAERFSVKRQ
                     INMFTVGLNYKF"
     gene            complement(2155..2427)
                     /locus_tag="VLJ17_06605"
     CDS             complement(2155..2427)
                     /locus_tag="VLJ17_06605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22683.1"
                     /translation="MNGNQYQRHAGGLVVHWRIAGAELADSLRAARRRRPAVRGWRQD
                     AERSTKQLAILLHLGPGQGVEIGDDLARATECGDPVLQRLLSAPAP"
     gene            complement(2598..3296)
                     /locus_tag="VLJ17_06610"
     CDS             complement(2598..3296)
                     /locus_tag="VLJ17_06610"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HSV22684.1"
                     /translation="MTKVLGVVGATLLFASTAFAADLPARAPLKAPPLIPVYNWTGFY
                     IGGNAGGVWDTASVTDNFFGISISDTRSGFIGGGQIGYNWQVAPQFVLGVEWMFDGTS
                     ISSGVGPVSDGFGNTFSASDKVSWLTTVTGRIGYAANNVLFYAKGGGGWVHDSVSATA
                     VDVLGNVFTVNGSDTRGGWVAGGGIEYGITPNWTVRIDYQHLGLSDVTIGGPDNVTAS
                     RHFDMVMGGVNYKF"
     gene            complement(3632..4612)
                     /locus_tag="VLJ17_06615"
     CDS             complement(3632..4612)
                     /locus_tag="VLJ17_06615"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSV22685.1"
                     /translation="MRKALCAAVIFAAAITLSGADAQTLPAQNWPTKSIRIIVPYPPG
                     GLSDVFARLIGDKIARLLGQSILIDNRPGGNTIIGTQATAQSAPDGHTLLLTNGALSI
                     NQSLVANLPYDLDKDLAPVIWLGESYGIIVVNDKVPARTLPELIRLAKDQPGKLSVGV
                     PGLGTNYRIAVEQLKVIADVDLTLVPYKGSAPAISDVVGGQIQIEIDSIVPLAPQVRD
                     GKVRALAVLAASRTPDLPDVPTTAEVGLPDVVIYGYNAILAPSATPQPIIDRLNAVVN
                     QILADADTIARGRTLGLRIGGGPPEQLKQTMDKVTEIYAKVIKAANIRPD"
     gene            complement(4899..5693)
                     /locus_tag="VLJ17_06620"
     CDS             complement(4899..5693)
                     /locus_tag="VLJ17_06620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSV22686.1"
                     /translation="MDLGIKNRRAIVTGGGSGIGYETARQLLEEGVRVAICGRNEGKI
                     SMARDALANATGGEIHAVTADMSKEPDIVRLIDSAKSALGGVDILVNNAGTMYSGRFA
                     ALTDDSLQVQLETKLFGFMRAIRLVYPLMKAQKWGRIVNMIGGAGKEPDPYMFGSGMT
                     NSALLNLTKSLSTEFGEDNVLVNAVCPGWVDTNLWSMNAQGLQQELGAQSDDDARRLA
                     ARKNSLGRFGTPAELANAIVFLCSERASYITGVSLNLDGGRLKNLW"
     gene            5811..>6569
                     /locus_tag="VLJ17_06625"
     CDS             5811..>6569
                     /locus_tag="VLJ17_06625"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSV22687.1"
                     /translation="MTAFSVGKASIARIEETYLPVYRPGDIFPAYDAGIAAEHAHWMA
                     PHHYDAEKDLIKLSVHSWLLQIDGKRILIDCCCGNNKPRPTRPFWNMLNTPYLDRLAA
                     AGVRPQDVDYVMCTHLHHDHVGWNTQLRDGSWVPTFPNARYVISKPDFEYYRKLDADP
                     DKTEPVEFGTFRECVLPIVEGGRADLVTGPHRLSEFLDIIPAPGHSAGHVVFRLESAG
                     NRAIFIGDVFHHLLQVYYPHWNFPKNSDAEQARIS"
BASE COUNT         1328 a         1989 c         1898 g         1354 t
ORIGIN      
        1 aaaaaggctt cggtggcttc accgaggccc tttttactga tgaacagaga ccgacgcgct
       61 cgggctgaag cgaccttcac cgagccgcgc ccgacccgcc gggcatctac cgcaccgcag
      121 ccaaggccag gttgaggcgc ccgacgtcgc catcaaagtt ggcggtcggc ccaggagcct
      181 catcgcggtc cgcaggccct agccgtcgac gaggggaaat atttggactt ccctcacgcg
      241 ctcccggaac atcgggtcgg cgtccaagtc ggtagcgagg cgcagccatc ctgcggccag
      301 ctcgaagagc gtcgattgcg cgccgtcggg tgcacagttg gccaatgcga cgcagcgctt
      361 tgacaattca cggcagtcgt tggaatctat ggaggcctcc cacgtcaatg gtgtgccaga
      421 gataccccga cgtgattccg ctcggcaact tccctaaggt cggaaaaagg ggagggcgat
      481 cgctatgacg acgaagtttt ttgatttcca gcaacgacca gtcatgccca gggtgattta
      541 cccaaggtga tagaccctgg gtaatcgcca tggcggctgc gccaaggcac gtcgttcacg
      601 gtcggcactg tacagggcga tgaagctgaa cgcgctcggc aacgccctga ttcgattcgt
      661 tgtcgctagg cttgtcccaa cgatcatgag gggccggcca tggtcaaatc ggagcggcca
      721 ccttgttgat tatcgctgag gctaagaaca aagaaggccc cggctactcc gccgaggcct
      781 ttccactgat gggaagggct tccccacgcg aactcaatta gaacttatag ttcaatccga
      841 ccgtgaacat gttgatctgg cgcttcacgc taaatctctc cgcaccaacg tcgatgttcc
      901 aattgttcag cccaagataa tcgtactccg ctttcatggt ccaattgggg gtgaggccgt
      961 attcgatgcc tgcgccgacc agccatccag cgttcgtgtt ggtattcccg acagacaggc
     1021 cttgcgtcac gttggtcacc gtcgcggaat tctgcgccca gccgccgccg cccttagcgt
     1081 agaacagcca gttgttcatc gcatagccaa accgtcccgc aatggtcgta atccaatccg
     1141 tatttgcggt ggcttggaaa tcattaccca ggatatttac cgtattgctc gttttgtgaa
     1201 ggttcgtccc atcgaacatc cactcgacgc cgaggacaaa ttgaggtgag acctgccagt
     1261 tgtagccgat ctgaccgccg ccgataaatc cggaattgct accggaaatg cttgcgccgg
     1321 tcggattatc cgtcaaggtg gcactggacc acgcacctcc caaattgcct ccgatgtaaa
     1381 atccggtcca attgtagacc gggagtggaa gaagcggagg cggtgctttt accggcaggt
     1441 cggccgcgaa agcgcttgac gccgcccccg tcagcagtgc gaccgcgcct aatccccaaa
     1501 tgcccctcat gatctaactc ctcattgctt gcgtaccccg caagaagctc gcgtactcgg
     1561 taaggtccaa tgactctcac cgtaaaatgg tggcaggctt tggaccatga gaaggcgaaa
     1621 actggaagcc gggaaccggc agtcgtgtcc agcggcgatt ctagcagggg ttgccacaga
     1681 caagtagatg aaagcggtca aggcggcggc taaaatacgt tgaatattag tgtgttaact
     1741 ggcgcaagct agattggtgt gatcggaaac tgtcataagt gtgcccgtgc atacccatat
     1801 gttgagaact caccagccaa ttttcaattg caaaccggcc ccgttacttc acagacgaga
     1861 atttgcaagg ttttccaggc aaatcccgca aaaccttacg gtatcggatt ctttcccgag
     1921 cttgccgacc tgtggcgagc gaccatgtga cctatcttca tcactttttg ctgacgcagg
     1981 tgacgcaggt gtatttaacg cgttgatttt gcccgtgcgg cgcctgacgg cagcgtcgac
     2041 gcccataggg cataatgggt gtcggcatag gtcggattag tcagagatca ccctgctgcg
     2101 attgtcgtca caccataatc aattgtcagt gaagtgtcgg acttatcgac agcttcacgg
     2161 cgctggtgct gaaagaaggc gctggaggac cggatcgccg cactccgtcg ctcgggcgag
     2221 atcatcgccg atctcgacgc cctgaccggg accgagatgg agcaggatag caagctgctt
     2281 cgtgctccgc tccgcgtcct gccgccagcc tcgcactgca ggccgccggc gtcgcgccgc
     2341 ccttaaactg tccgccaact ccgcaccagc aatccgccaa tggactacca agccgccagc
     2401 gtgacgctga tactggttgc cgttcaatgg tccgttctcg cttcgggtat cgttcgcccg
     2461 atggccgcca attggcaagg cgcgcaatcg cacgtcgagt tttcatcatg gacgacaaga
     2521 aaaaaggctc cggcggcttc gccggagcca gtccactgaa aagcccaagc ttcgatgctt
     2581 ggcttttcac aacgctctca gaacttgtag ttcacgccgc ccatgaccat gtcgaagtgg
     2641 cgcgacgcgg ttacgttatc cgggccacca atggttacat cgcttagtcc gaggtgttga
     2701 tagtcgattc tcacggtcca attgggagtg ataccgtatt caataccccc accagcgacc
     2761 cacccgcctc tggtgtcgga cccgttaacc gtaaatacgt tgcctaggac gtcgacggcg
     2821 gtcgctgaca cgctatcatg cacccagccg ccaccgccct tagcatagaa cagcacgttg
     2881 tttgccgcat agccgattcg gcccgtgact gtggtgagcc aactgacttt gtcactggct
     2941 gaaaaggtat taccaaagcc atcgctcacc ggaccaacgc ccgaactgat actcgtgcca
     3001 tcgaacatcc attcgacgcc gagaacaaac tggggcgcga cttgccagtt gtagccaatc
     3061 tggccaccac cgataaatcc ggatcgcgtg tcactgatac ttataccgaa gaaattatcg
     3121 gtcactgaag cagtgtccca cacaccgcct gcgttgccac cgatatagaa tccggtccaa
     3181 ttatagaccg gaatcagagg tggtgctttg agcggtgccc tggctggcag gtcagccgcg
     3241 aacgctgtac tggcaaagag caacgtcgct cccaccacac cgagaacttt cgtcaattac
     3301 gcctcccact ttcaatgcaa cactagaatc cgcttatagc gaaacatctt cgggttggct
     3361 gtagcgcaac tgctacgatc gagatattga aagaagcgcc ggagcggcag gattgtggcg
     3421 gattttgggg agcggaaccc gcgggggctc aaacttatgg agattttgct gtttgatggc
     3481 cgcccaagcg ggcaaatgcg tggaagtggt gggcatcagg ctgggcagat cgcgcaacgt
     3541 atattcggcg catcggctca cacgagctga gatttgcgca atccgaatcg ccaaaagcgg
     3601 cccgccaaga agcgcgtcgc ggtccgaagc tctagtccgg tctgatgttc gccgctttga
     3661 taaccttggc gtaaatctcc gtcaccttgt ccatggtctg cttaagctgc tccggcgggc
     3721 cgccaccgat tcgcaatccc aacgtgcggc cgcgcgcgat cgtatcggcg tccgcgagaa
     3781 tctggttcac gacggcgtta agccggtcga tgataggctg cggggtcgcg gacggcgcca
     3841 ggatcgcatt gtagccgtag atcaccacgt ccggcaggcc gacctcggcg gtcgtcggca
     3901 catcgggcag gtcgggcgtg cggctggcgg ccagcacagc gagcgcccgg accttgccgt
     3961 cccgcacctg cggggcgagc ggaacgatgc tgtcgatctc gatctggatc tggccgccaa
     4021 cgacatccga gatggccggc gcgctgccct tatagggcac cagcgtgaga tcgacgtctg
     4081 cgatgacctt gagctgctcg actgcgatgc ggtagttggt gccgagtccc ggcaccccga
     4141 ccgagagctt gccaggctga tccttggcga gccggatcag ctccggaagg gttcttgccg
     4201 gcactttatc attcaccacg atgatgccgt agctctcgcc gagccagatc acaggcgcaa
     4261 ggtccttgtc gagatcgtag ggcaggttgg cgacgaggct ctgattgatg ctgagcgcgc
     4321 cgttggtgag cagcagcgta tggccatcgg gggcggattg ggcggttgcc tgggtgccga
     4381 tgatggtgtt gccgcccggt cggttgtcga tcaggatcga ctggcctaac aggcgcgcga
     4441 tcttgtcgcc gatcaggcgg gcgaatacgt ctgagaggcc gccgggcggg tagggcacga
     4501 tgatgcgaat cgatttggtc ggccagtttt gcgccggcaa cgtttgtgca tccgcaccgc
     4561 tcagcgttat ggccgccgca aaaatcactg ccgcgcacag tgctttgcgc atttttcctc
     4621 cctcacagtt attgctccct tcccgttttg taggggaggg agcagacgcg cttgctcttt
     4681 ggcaatccgc accggctcgc cgcaagcggc gtcccggaat aacgtccaca acgctacagc
     4741 aggtcccggt gaattgtaac cggcacggct acacctcttg tgtcatggcc cggcttggct
     4801 tggcgaccca gtaaaccccg gcaatgcccg ggagtactgc tttcgcggac gatgacgttc
     4861 gattccatct gaccgagaac cgcttgtagc gttgaaacct accacaggtt cttgagccgt
     4921 ccgccgtcaa ggttaagcga gacgcctgtg atgtagctcg cccgttccga gcacaggaac
     4981 acgatggcat tggcaagttc cgccggcgtg ccgaagcggc cgagcgaatt ttttcgtgcc
     5041 gcgagccgcc gtgcatcgtc gtcggattgt gcgcccaact cctgctgcag gccttgcgcg
     5101 ttcatgctcc acaagttggt gtcgacccat ccgggacaca cggcgttcac cagcacgttg
     5161 tcttcgccga attccgtcga cagcgatttg gtcagattca agagcgcgct gttggtcatg
     5221 ccgctgccga acatataagg gtcgggctcc ttgccggcgc cgccgatcat gttgacgatg
     5281 cggccccact tctgcgcctt catgagcggg taaacgagcc ggattgcccg catgaaaccg
     5341 aacaacttgg tctccagctg aacttgcagg gaatcgtcag tcagcgccgc gaagcggcca
     5401 gagtacatcg tcccggcatt gttcaccaga atgtcgacac cgccgagcgc tgacttggca
     5461 ctgtcgatca gccgcacgat atctggctcc ttcgacatgt cggctgtcac cgcgtgaatt
     5521 tcgccgccgg tcgcgttggc gagcgcgtca cgcgccatgc tgatctttcc ttcgttgcgg
     5581 ccgcagatcg cgacccgcac gccttcctcg agaagttggc gcgcggtttc gtatccgatg
     5641 ccactgccgc cgccggttac gatggcgcgg cggttcttga taccgaggtc catgcgctcc
     5701 tcctcgggcg aacagttccg ccgggttgcg tgacggctta ccttgacggt cccgatccga
     5761 ccaccgagta tttagccgac aatactcagg aacggactgc gaggaaacag atgacggcgt
     5821 tttcggttgg taaggccagc atcgcacgca tcgaggagac gtacctgccg gtgtaccgcc
     5881 cgggcgacat ttttcccgca tacgatgccg ggatcgctgc ggagcacgcg cattggatgg
     5941 caccccatca ctatgacgcc gagaaagacc ttataaagct cagcgtgcat agctggctgt
     6001 tgcagatcga tggcaagcgc attctcatcg actgctgttg cggcaacaat aagccgcggc
     6061 cgacccggcc gttctggaac atgctcaaca cgccctatct cgatcgcctt gccgccgccg
     6121 gcgtgcggcc gcaggatgtc gactacgtaa tgtgcacgca tcttcatcac gatcacgtcg
     6181 gttggaacac gcagttacgc gacggcagct gggtgccgac atttccgaat gcccgatacg
     6241 tcatctccaa gccggacttt gagtattacc gcaagctcga tgccgacccc gacaagacag
     6301 agcccgtgga gttcggcacg tttcgggagt gcgtgctgcc aatcgtcgaa ggagggcgcg
     6361 ccgatctcgt caccgggccg caccggctca gcgaattttt agacatcatc ccggcacccg
     6421 gacactcggc cggtcacgtg gtgttccggc tggaaagcgc cggcaatcgc gccattttca
     6481 tcggcgatgt gttccatcat ctgttgcagg tctactaccc gcactggaat ttcccgaaaa
     6541 actccgacgc cgagcaggct cgcatcagt
//
LOCUS       DATILV010000289         2561 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1346792, whole genome shotgun sequence.
ACCESSION   DATILV010000289 DATILV010000000
VERSION     DATILV010000289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2561)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2561)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2561
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1346792"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            446..2290
                     /locus_tag="VLJ17_06630"
     CDS             446..2290
                     /locus_tag="VLJ17_06630"
                     /inference="COORDINATES: protein motif:HMM:NF033559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HSV22688.1"
                     /translation="MYIRKSTRAYKGRTYTNYVLVESAQTPKGPRQKTVCSLGDLSPR
                     PREEWLRLTRKIEDALLGQERLVDRGDAEVAAIVRQVREQRDKAPPQPPGAAGDRELI
                     TVDPSRVTTEQHREAGPVHVGFQFWQRLSLDRILHDCGLPETVRQLACAVVLNRLIAP
                     ASEHAMPDWMRRTALVDILDVDFDGVDDDRLYRLLDRLYPHRATIEAALVLRERSLFN
                     LDTTVYLYDLTSTYFEGLCARNGKAKLGHSRDKRSGCKQVVVGLVVNRDGFPIAHETF
                     TGNTRDHTTLATMLDRLAERAGLKEGATVVIDRGMAYDENLAELKKRNLHYVVASRQP
                     ERDRWLADFEDTDGFTPVLRQPSPLNSGQRKSTIEVKIQTEDEQTYVLCRSEQRIAKD
                     RAIRTKQEERLRADIDKLTKRIANGRLVNVAKINQAIGRLKERYPRVARYYNLTYNQQ
                     NGMLNAEFDADKHRHAERLDGCYLLKTSRKDLSGDELWRIYILLTRAENAFRDMKSPL
                     AVRPIWHHRERRVDTHIFLCVLAYHLLISIEKTLLDHGVHTSWATVRDTLKTHQICTV
                     VLPTDDGACLRIRKAATPDPDVKELYRYLDVSADIIKPQRTWAKPNSD"
     gene            complement(2298..>2561)
                     /locus_tag="VLJ17_06635"
     CDS             complement(2298..>2561)
                     /locus_tag="VLJ17_06635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22689.1"
                     /translation="QQLRRQLLATHCFDELLCEQYVHALKERTARVLSGTLVPAAAGS
                     WMTPQRLRLVDELIEARLDAKVTVEELAQPPHFDGQNPFASKG"
BASE COUNT          539 a          824 c          708 g          490 t
ORIGIN      
        1 atggccgctc ggtgatcact gcgatgatcc ctagtgttcg tcggccggat gcggacggaa
       61 acacccatcg caatcagagg ccggaaacgt ccattgcggc ggttgcgaac acctctgcgc
      121 aataggcgga acaggctcaa cgcgccctgt tcagcatggc gccgacccgc cggccgatgc
      181 tcgtcctccg taccgcggca agcttcgcat ttgccgcgct cgccgccacg atcgcctggt
      241 tcggcattag cccaacctcc gcattgccgt gagcgtatcg gcagaatttg gagccttgag
      301 gcgtatccga ttgggctacg tcattgattt tgctcagggc ggattccggc gcagcgcaaa
      361 tagtgactaa aaatatttac gccgacccct ggcggaagcg gacttcctat gcttcgtagt
      421 gggacgaact gattcgcggt gggccatgta catccgcaaa tcgacccggg cttacaaagg
      481 ccggacgtac accaattacg tcctggtgga gtcggcgcag acccctaagg ggcctcgcca
      541 gaagaccgtc tgctcgcttg gcgatctcag cccacggccg cgcgaagaat ggctcaggct
      601 cacgcgcaag atcgaagatg ctctgctcgg tcaggagcgc ctggttgatc ggggcgacgc
      661 cgaagtcgcc gccatcgttc gtcaggtgcg agaacaacgc gacaaggccc caccgcagcc
      721 tcccggggct gctggcgaca gggagctgat caccgtcgat ccgtctcggg tcaccaccga
      781 gcagcatcgt gaagccgggc cggtccacgt cggctttcag ttctggcagc gtctcagtct
      841 tgatcgcatt ctgcacgact gcggcctacc tgagaccgtg cgccagctgg cctgtgcggt
      901 ggtgctcaac cgactgattg cgccggcctc tgaacatgcc atgccggatt ggatgcggcg
      961 tacggcgctg gtcgacattc tcgatgtcga tttcgatggc gtcgatgatg accggctgta
     1021 tcgattgctt gacaggctct atccgcatcg cgcgaccatc gaggcggcct tagtcctgcg
     1081 cgagcgcagc ttattcaatc tcgacacaac ggtttatctc tacgatctca catcaacgta
     1141 tttcgagggc ctgtgtgccc gcaatggaaa ggccaagctc ggccattctc gcgacaagcg
     1201 ctccggctgc aaacaggtcg tggtggggct cgtggtcaat cgcgatggat tcccgatcgc
     1261 ccacgagacc ttcaccggca atacccggga ccacaccacg cttgccacca tgctcgatcg
     1321 tctcgctgag cgcgccggcc tcaaagaagg tgccaccgtg gtgatcgatc gaggcatggc
     1381 ctatgacgaa aacctcgccg agctcaagaa acgcaatctg cactacgtcg tcgccagccg
     1441 gcagcccgag cgcgatcgct ggctcgccga tttcgaagac accgatggct ttaccccggt
     1501 gttgcgacag ccttctccgc tcaattcggg tcaaaggaag tcgacgattg aggtcaaaat
     1561 ccaaaccgag gacgagcaga cctacgtgct ctgtcgcagc gagcaacgca tcgccaaaga
     1621 tcgcgccatt cgcaccaagc aggaagagcg cttgcgtgcc gatatcgaca agctcacaaa
     1681 acgcatcgcc aacggaaggc tcgtcaatgt cgccaagatc aaccaggcca tcggacgatt
     1741 gaaggagcgc tacccccgcg tggcccgcta ttacaacctg acctataacc agcagaatgg
     1801 catgctcaat gccgagttcg acgccgacaa acaccgccac gccgaacgcc tcgacggctg
     1861 ctatctgctc aagaccagtc gcaaagacct ctcaggcgac gaactctggc gcatctatat
     1921 tctgcttacc cgcgcggaga atgcctttcg cgacatgaaa tcgccgctcg ctgtgcgacc
     1981 gatctggcac catcgcgagc gccgcgtgga cacccatatt tttctttgtg tgttggccta
     2041 tcatctgctg atctcgatcg agaaaaccct gctcgatcac ggtgtccaca cttcgtgggc
     2101 caccgtacgc gacactctca agacccacca gatctgcacc gtcgtcctgc caaccgacga
     2161 cggcgcatgt ctgcgcatcc gcaaggccgc gacccccgac cccgacgtaa aggagctgta
     2221 tcgctatctc gacgtttccg ccgacatcat caagccgcag cgcacatggg ccaagcccaa
     2281 tagtgactaa aaaaactcta cccctttgat gcaaaagggt tttgcccatc aaaatgcgga
     2341 ggttgggcta gctcttcgac tgtcaccttc gcatccaacc ttgcctctat cagttcatcg
     2401 acgagccgaa gacgctgcgg cgtcatccac gaaccggcgg cagccggcac gagggttcca
     2461 ctcaagacgc gagccgttcg ttccttgaga gcatgaacgt attgttcgca tagcagctca
     2521 tcaaagcaat gcgttgccaa tagctggcgg cgcagctgct g
//
LOCUS       DATILV010000290         3789 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_578113, whole genome shotgun sequence.
ACCESSION   DATILV010000290 DATILV010000000
VERSION     DATILV010000290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3789)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3789)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3789
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_578113"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2108)
                     /gene="kdpB"
                     /locus_tag="VLJ17_06640"
     CDS             complement(<1..2108)
                     /gene="kdpB"
                     /locus_tag="VLJ17_06640"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031004 - potassium ion-transporting
                     ATPase complex [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpB"
                     /protein_id="HSV22690.1"
                     /translation="METSNIRKGTPASALFDPKIAVPAIISAFVKLDPRTLFRNPVMF
                     VLEVVTTLTTIILFRDLVIGGSHIGFEFQIVLWLWFTVLFANFAEAIAEGRGKAQADS
                     LRKTRTETLAKLLTGPSRTNYKTVPGTSLKVGDVVIVEAGETIPSDGEVIEGIASVNE
                     AAITGESAPVIRESGGDRSAVTGGTQVLSDWIKVRISAAQGSTFLDRMIRLVEGAERQ
                     KTPNEIALNILLIGLTIIFVFATATIPSYVTYAQGAVSIVILVALFVTLIPTTIGALL
                     SAIGIAGMDRLVRFNVLAMSGRAVEAAGDVDTLLLDKTGTITLGNRQATEFKPIRGVT
                     EQELADAAQLASLADETPEGRSIVVLAKDKYGIRGRDLAEIRANFIPFTAQSRMSGVE
                     VGDSWVRKGAVDSILNFLNAPVASVGPSAAVRALQPAVNTEQLREINSIADAIAKSGG
                     TPLAVAKDGRLLGVIHLKDIVKGGIRERFAELRRMGIRTIMITGDNPMTAAAIAAEAG
                     VDDFLAQATPEDKLRLIRDEQAKGKLVAMCGDGTNDAPALAQADVGVAMNTGTVAARE
                     AGNMVDLDSNPTKLIEIVEIGKQLLMTRGALTTFSIANDVAKYFAIIPAMFLAFYPQL
                     GALNVMGLSTPQSAILSAIIFNALIIVALIPLALRGVKYVPQSAGRLLLRNLFIYGVG
                     GVIVPFAGIKVIDVLITNLG"
     gene            complement(2123..>3789)
                     /gene="kdpA"
                     /locus_tag="VLJ17_06645"
     CDS             complement(2123..>3789)
                     /gene="kdpA"
                     /locus_tag="VLJ17_06645"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031004 - potassium ion-transporting
                     ATPase complex [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpA"
                     /protein_id="HSV22691.1"
                     /translation="VALVSPLGWYMTRVFNGERTFLSPVLRPVEAALYRVGGIDERRE
                     QHFVTYTIAMLFFHVGGFLILYALMRFQAVLPFNPAEQSAVAEDLSFNTAVSFITNTN
                     WQNYGGESTLSYLVQMLGLTHQNFLSAATGIVLAVALIRGFARASVKTIGNFWVDVTR
                     CTLYILLPICIVYALFLVWQGIPQTLGPYVEATTLEGAKQTIAVGPVASQIAIKMLGT
                     NGGGFFNANAAHPFENPTAFANFVQMISIFSIGAALTNVFGRMVGNPRQGWAILAVMG
                     VLFISGVAVTYWAEARGNDAFTAMGLTGGNMEGKEVRFGIVASALFAVITTAASCGAV
                     NAMHDSFTALGGMIPLINIQLGEIIVGGVGAGIYGMLLFVILAIFVAGLMVGRTPEYV
                     GKKIEAKEVKMAMLAILILPLMYLGWTAVAVVIPSAVASMANPGPHGFTEVLYAYTSQ
                     TGNNGSAFAGLTGNIPFYNVTGAVAMFVGRFWMIVPAMAIAGSLAAKKSIPPSAGTFP
                     TTGGLFVGLVVGVIVIIGGLTFFPALALGPIVEHLAMTAGTLFSSN"
BASE COUNT          788 a         1126 c         1189 g          686 t
ORIGIN      
        1 atgccgagat tggtgatcag aacgtcgatc accttgatgc cggcgaacgg cacgatgacg
       61 ccgccgacgc cgtaaatgaa cagattgcgc agcaacaggc gtcccgcgct ctgcggcacg
      121 tatttgacgc cgcggagcgc aagcgggatc agcgcgacga tgatgagcgc gttgaagatg
      181 atcgccgaga ggatcgcgct ctgcggagtc gacagaccca tgacgttgag cgccccgagc
      241 tggggataga acgcgaggaa catcgccggg atgatggcga aatatttcgc cacgtcgttg
      301 gcgattgaga acgtggtaag cgcaccgcgc gtcatgagca gctgcttgcc gatctcgacg
      361 atctcgatca gtttggtcgg gttcgagtcg aggtcgacca tgttgccggc ttcgcgcgcc
      421 gcaacggttc cggtattcat ggcgacgccg acatcggcct gggcaagcgc cggtgcatcg
      481 ttggtgccgt cgccgcacat cgccaccagc tttcccttgg cctgttcgtc gcggatgagc
      541 cgcagcttgt cttccggggt cgcctgagcg aggaaatcgt cgacgccggc ctcagcggca
      601 atcgcggcag cggtcatcgg attgtcgccc gtgatcatga tggtgcggat gcccatacga
      661 cgcagctccg caaagcgttc acggatcccg cccttgacaa tgtccttgag gtgaatcacc
      721 ccgagcaacc ggccgtcttt cgcaactgcg agtggcgtgc ctccggactt ggcgatggca
      781 tcggcgatgg agttgatctc tcgcaactgc tcggtgttga ccgccggctg gagcgcgcgg
      841 acggcagcgg acgggccaac cgaagccacc ggtgcgttca ggaaattcaa gatcgagtcg
      901 actgcaccct tgcgcaccca cgaatcgccg acctccactc cgctcatccg gctctgggcc
      961 gtaaagggaa taaagttggc gcggatttcc gccaaatcgc gcccgcgtat gccgtactta
     1021 tccttggcga gcacgacgat ggaacggcct tccggggtct cgtcggcaag cgatgcaagc
     1081 tgcgcggcgt ctgccagttc ctgctcggtc acaccgcgta tgggcttgaa ttcggttgcc
     1141 tgccggttgc cgagcgtgat ggttccggtc ttgtcgagga gaagtgtatc gacgtcgccc
     1201 gctgcctcca cggcccggcc tgacatggcg agtacgttaa agcgcaccag gcgatccatg
     1261 ccggcaatgc cgatcgcgga cagcagcgcg ccgatcgtcg tcggaatcaa ggtgacaaag
     1321 agcgccacca ggatgacgat ggaaactgcg ccctgagcat aggtcacgta acttggaatc
     1381 gtcgccgtcg caaacacgaa gatgatcgtc aggccgatca gcagaatatt cagcgcgatt
     1441 tcgttcggcg tcttctggcg ttcggcccct tcgaccagcc ggatcatccg atcgaggaat
     1501 gtcgaaccct gagccgcgct gatacgcacc ttgatccagt cggacagcac ctgcgtgcct
     1561 ccggtaaccg ccgagcggtc gccgcctgac tcgcggatca cgggtgccga ttcgccggtg
     1621 atcgcggctt cgttcaccga ggcaatgccc tcgatgacct cgccatccga cggtatggtc
     1681 tcgccagcct cgacgatgac cacgtcgccg actttgaggc tggtgcccgg gacggtcttg
     1741 taattggtcc ggctggggcc ggtcagcagc ttggccaggg tctccgttcg ggtcttgcgc
     1801 agcgagtcgg cctgagcctt gcctcgacct tccgcgattg cctccgcgaa gttggcgaac
     1861 agcactgtga accacagcca taagacgatc tggaattcaa agccgatgtg gcttccgcct
     1921 atgacaaggt cacggaacaa gatgatagtg gtaagcgtcg tgacgacctc gagcacgaac
     1981 atcaccggat tcctgaacag cgtccgcggg tccagcttca caaaagccga gatgatggcc
     2041 ggcaccgcga tcttgggatc gaacaacgcc gatgccggcg ttcccttgcg gatatttgag
     2101 gtttccatgg attgactccg gatcaattcg acgagaacag cgtgcctgcg gtcatcgcga
     2161 gatgctcgac gatgggtcca agtgcaagcg cgggaaagaa ggtcaggccg ccgatgatga
     2221 cgatcacgcc aacgaccagg ccaacgaata acccaccagt tgtcggaaac gtgccggccg
     2281 atggcggaat cgacttcttg gctgcgagtg agcccgcgat tgccatcgcc ggaacgatca
     2341 tccagaaccg gccgacaaac atggcgacgg cgccggtgac gttgtagaag gggatgttgc
     2401 cggtaaggcc agcgaaagcc gacccgttgt tgccggtctg cgatgtgtaa gcgtagagaa
     2461 cctcagtgaa gccatgcggc cccgggttcg ccatagacgc gaccgcggat ggaattacca
     2521 cggccacggc cgtccaaccg agatacatca gcggcaggat caggatggcg agcattgcca
     2581 tcttgacttc cttcgcctcg atcttcttgc cgacatactc gggggtgcgg cccaccatca
     2641 ggccggcgac gaagatcgcc aggatcacga acagcagcat gccgtagatg ccggcgccga
     2701 cgccgccgac gatgatctcg ccaagctgga tgttgatgag cggaatcatg ccgccgagtg
     2761 ctgtgaacga gtcgtgcatg gcgttgacgg caccgcatga ggctgcggtg gtgataactg
     2821 cgaacagcgc tgaggcgacg atgccgaagc gaacttcctt gccctccatg ttcccgccgg
     2881 tgaggcccat tgcggtgaag gcatcgttgc cgcgagcttc tgcccagtag gtcactgcga
     2941 caccggaaat aaacaatacg cccatgacgg cgaggatggc ccagccttgg cgggggttgc
     3001 cgaccatgcg gccgaagaca tttgtcagag cggccccgat cgagaagatc gaaatcatct
     3061 gcacgaagtt cgcgaaagct gtcgggttct cgaacggatg cgcggcattg gcgttgaaaa
     3121 agccgccgcc atttgtgccg agcatcttga tcgcgatctg agatgcgacc ggccctactg
     3181 cgattgtctg cttggcgccc tcaagcgtgg tcgcttcgac atagggacca agcgtctgcg
     3241 gtatgccctg ccaaaccagg aagagcgcat acacgatgca gataggcagc aggatgtaga
     3301 gcgtgcagcg tgtgacatcg acccaaaaat tgccgatggt cttgaccgag gcccgagcga
     3361 agccgcgaat cagcgcgacc gcaaggacga tgccggtcgc agccgacaga aagttctgat
     3421 gcgtcaggcc gagcatctga acgagataag aaagcgtgct ttcgccgccg tagttctgcc
     3481 agttggtgtt ggtgatgaag ctcaccgcgg tgttgaagga cagatcctcc gcaactgcgg
     3541 actgctctgc cggattgaaa ggcaggaccg cctggaagcg catcagggcg taaaggatga
     3601 gaaatccacc cacgtggaag aacaacatgg cgatcgtgta ggtaacgaaa tgctgctcgc
     3661 gtctctcgtc gatcccccca acccggtaaa gagccgcctc aaccggccgc aagaccggtg
     3721 aaagaaaggt gcgttcgccg ttgaagacgc gcgtcatgta ccagccgagc ggcgaaacaa
     3781 gcgcaacgg
//
LOCUS       DATILV010000291         4926 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_578694, whole genome shotgun sequence.
ACCESSION   DATILV010000291 DATILV010000000
VERSION     DATILV010000291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4926)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4926)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4926
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_578694"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(16..870)
                     /gene="pdxY"
                     /locus_tag="VLJ17_06650"
     CDS             complement(16..870)
                     /gene="pdxY"
                     /locus_tag="VLJ17_06650"
                     /EC_number="2.7.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008478 - pyridoxal kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009443 - pyridoxal 5'-phosphate salvage
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal kinase PdxY"
                     /protein_id="HSV22692.1"
                     /translation="MNLISIQSHVAYGHVGNSAAVFALQRLGCEVWPVHTVQFSNHTG
                     YGSWKGEVFAAARIGEVVDGIANLDMLGVCGGVLSGYIGAVETGEAILAAVGKVKAAN
                     SLASYCCDPVIGDRARGEFVRPGIVEFMRARAVPTAQVVTPNHFELDRLTGRETRSLA
                     AVLSAVDDIHACGPRAVLVTSMRSDETPDDRLDIIASDANGRHLVRTPLLATPANGAG
                     DLIAALFFFHYLRSGSTGDALADATSSVYGLLRRTRDAGASEIALVAAQDELVAPSER
                     FAPVRIGL"
     gene            complement(885..1901)
                     /locus_tag="VLJ17_06655"
     CDS             complement(885..1901)
                     /locus_tag="VLJ17_06655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006613748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV22693.1"
                     /translation="MTKLLSRVAASLAVVALASGAAVAKITIAIGGAGCLCYLPTVLA
                     EQLGEYKKAGVEIELVNFKGGSQALTAVIGGSADVVSGYYDHCVNLAAKNQNLQAFVV
                     YDRYPGMVLGVSPRHTNEINSVKDLAGKKVGVSAPGSSTDFFLKYLLSKNGIAPDSAA
                     VIGIGLDATAVAAMEQGTVDAAVMLDPTPTLLGAKFSMLKILSDTRTQADTLSVFGGE
                     YPGGALYTRGDWIAKHEKETQALTDAILATLKWIHSHTPEEIMAKMPEDLVGPDKALY
                     LSALKNTIPMYSTTGRMDPRGTEAVLRVFSLSSPDVAKAKIDLSRTYTNKFVEQAAQK
                     LGMR"
     gene            complement(2618..3595)
                     /locus_tag="VLJ17_06660"
     CDS             complement(2618..3595)
                     /locus_tag="VLJ17_06660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV22694.1"
                     /translation="MKLSRRRFLQFAGAVAAGPVLPQHARALDYPVKPIRWIIGYPAG
                     GSADTVSRILAQWLTERLGQPIIIENKPGAATNISLQAAISAPPDGYTMVYLGTSATV
                     NPSFFESLPFNVLRDIAPVSGIYDSPLVLVVNNSIRSKTTAEFIAYAKANPGKINMAS
                     FGVGTTSHLAGELFQAMTGTKLVHVPYRGEAFALSDMISGQVQVMFDTLSAALPHIRS
                     GALRALGVTSKTRYEGLPDVPTVDETVAGYEAISWGGIGVPRGTPAAVIARLNREVNA
                     ALADPAVRKRFDDLAGRPIFYAPADFGAFMAAETEKWANVVKLSGVKAE"
     gene            complement(3797..4048)
                     /locus_tag="VLJ17_06665"
     CDS             complement(3797..4048)
                     /locus_tag="VLJ17_06665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22695.1"
                     /translation="MLRQLLNGFTAVITLCIAVAINSSVAWSNVSSLAGQSHMTRAEF
                     DQVFADAAAAAARSGNTPANRERLRNIGWKYLNVPLASK"
     gene            complement(4227..>4926)
                     /locus_tag="VLJ17_06670"
     CDS             complement(4227..>4926)
                     /locus_tag="VLJ17_06670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22696.1"
                     /translation="ALDSKMTLKDLDAVVDECTGVGHPAAVRSDQQKQNLTNILGVMG
                     YPENLLVRHMQAGTLLFRDMVKNTAGGHNPFSNIGIRYRGSSDDDALNRDVVRFDADP
                     AAAAIVKADGDPTGVLPVPVVSIHSSNDPQVVVEAQSAYRDAVKAAGSGDRLVQAFTD
                     ERGHTAQSAPELAAGLDALMQWIENGAKPTAQSIATACEQMRTHVDGPCRYHPEFMPK
                     PYASRYYAREAAMR"
BASE COUNT          966 a         1532 c         1522 g          906 t
ORIGIN      
        1 aacgcgcttg atttgtcaaa ggccgatccg aaccggtgca aatctttcag atggcgctac
       61 caactcgtcc tgcgcggcaa ccagggcgat ttcggatgcg ccggcgtcgc gcgttcgccg
      121 caacagccca tacaccgacg acgttgcgtc agccaacgcg tcccctgtcg agccgctgcg
      181 caggtagtgg aaaaagaaca gggccgcgat gagatcgccg gcgccattgg ccggggttgc
      241 gagcagcggc gtgcggacga gatgccgccc atttgcgtcc gaggcaatga tgtcgagcct
      301 gtcatcgggc gtctcgtcag agcgcatcga cgtgaccagc acggcgcggg ggccgcaggc
      361 gtggatatcg tcaaccgcgg agaggacagc ggcgaggctt cgggtctccc gcccggtgag
      421 tcgatcgagt tcgaaatgat tgggtgtgac aacctgggca gtcggaaccg cccgcgcgcg
      481 catgaattcc acaataccgg gccgcacgaa ttcaccgcgt gcgcggtcgc cgatgacggg
      541 atcgcagcaa tagctcgcaa gggagttggc agccttgacc ttgccgaccg ccgccaggat
      601 tgcctcaccg gtttcaactg cgccgatgta gcccgacaac acgccgccac acaccccaag
      661 catatcaaga ttcgcgatgc catcgaccac ctcaccgatc cgggccgccg cgaatacttc
      721 gcctttccag gaaccataac ccgtatggtt agagaactgc acggtgtgga ccggccacac
      781 ctcgcagccg agtcgctgca gcgcaaatac ggcggcagag ttgcccacgt gcccataggc
      841 gacgtgggac tggatggata tgaggttcat accgaggctt aagcctatcg catccccagc
      901 ttctgcgccg cctgctcgac aaatttgttg gtataggtcc tcgacagatc aatcttggcc
      961 ttcgcaacgt cgggagacga caggctgaat accctgagca cggcttccgt acctctcgga
     1021 tccatgcggc ccgtggtgga atacatcggg atcgtgttct tcagcgccga aagataaagc
     1081 gccttatcgg gaccgaccag gtcttccggc attttcgcca tgatctcctc tggggtatgg
     1141 gagtggatcc atttcagggt ggcgaggatc gcgtcggtga gcgcctgggt ttccttttcg
     1201 tgcttggcga tccagtcgcc gcgcgtgtaa agggcgccgc ccggatattc gccgccaaac
     1261 accgacaggg tatcggcctg ggtacgggtg tcgctcaaaa tcttgagcat cgaaaacttg
     1321 gcgcccagca gggtcggggt cgggtcgagc atcacggcgg catcgacggt cccctgctcc
     1381 atggcggcga ccgcggtggc gtcgaggccg atgccgatga ccgcagccga atccggcgcg
     1441 ataccgttct tggagagcag gtatttcagg aagaaatcgg tcgaggagcc cggcgcgctg
     1501 acaccgacct tcttgccagc gaggtccttc acggaattga tttcgttggt gtgccgcggc
     1561 gatacgccga gcaccatccc gggatagcga tcgtagacca cgaaggcctg caagttctgg
     1621 ttcttggcgg cgagattgac gcagtggtca taatagccag acaccacatc ggcgctgccg
     1681 ccgatcacag cggtgagcgc ctgggagccg cccttgaaat tgacgagctc gatctcgacg
     1741 cccgctttct tgtattcgcc gagttgctcc gccagcacgg tgggcaggta gcacaggcaa
     1801 cccgccccgc cgatcgcaat ggtaattttc gcaaccgccg cgccggaggc gagcgcgaca
     1861 acggccagcg atgcggcgac gcgggaaagc aatttcgtaa tcatgggggt cctccgggtt
     1921 tcctgaaacg gacgaattgg agcacggcac gggccttaag aatcgccttg cgaaacccat
     1981 caagacaggc gccacgggtg tcagccgata atacccattc tacgcttact gagaacgccg
     2041 gttacgccgc aaatagagca ccgacaacgc gatgcgtagg gtttcacacc cgtatggcgc
     2101 gaatcaggcg ctctcgcggc tcttcgctgg aaccagccta ccgatcgccg ccgtcatgac
     2161 gttgccgaaa aacagcattg ttgagcgtgg cggcgtgctg ctcgtcggtc caggtcgcgt
     2221 tggcgtccga caacgatcct ctccatattg cagagaattg catcagattc gtagattaca
     2281 aaattactgt ttcagccctt ggcgccctcg tcgaggctcg tcaggcgttt cccgctcggg
     2341 cgtgagcatg tatgcgtgat ggtcccccag tgatcgagcg cgccgcggtg gtctggcccg
     2401 cgcgtcgacg gcccgcatcg ccggcgaggc aattgatggt gggagctcac acgacagcgg
     2461 aacttcggcc ggaaagcctt cggccacaaa gtggttttgc ctgtcgacga ccaccagcgc
     2521 gatgcgcgcc gcgtcaatcg tatcttacga gctcccctgg cggcgaatga gacgctcctt
     2581 gacggcatcg gaaaccgcat aacggtgcac cgggggctca ctccgccttg accccggaca
     2641 gcttgaccac gttggcccat ttctcggtct ctgcggccat gaaggcgccg aaatccgccg
     2701 gcgcgtaaaa gatgggccta ccggcaagat cgtcgaaccg cttgcgcacc gccggatctg
     2761 caagcgcggc attgacctcg cggttgagcc gcgcgatgac cgcggccggc gtgcctcgcg
     2821 gcaccccgat gccgccccaa gagatcgcct cgtaacccgc gacggtttcg tcgaccgtcg
     2881 gcacatcggg cagcccctca taccgggtct tgctcgtgac cccgagcgcc cgcagcgcgc
     2941 ccgagcggat atgtggcaat gcggccgaca aggtgtcgaa catcacctgc acctggccac
     3001 tgatcatatc ggagagcgcg aaagcctcgc cccgatatgg cacatggacg agcttcgttc
     3061 cggtcatggc ctgaaacaac tcgccggcga gatgcgaggt ggtgccgacc ccgaacgagg
     3121 ccatgttgat cttgccggga ttggcctttg cataggcaat gaactccgca gtggtcttgg
     3181 accggatcga gttgttcacc acaagcacga gcggagagtc gtaaatgccc gacaccggcg
     3241 cgatgtcacg cagcacgttg aagggcaacg attcgaaaaa ggaggggttc acggtggcgg
     3301 aggtgccgag atagaccatg gtataaccat caggcggcgc actgattgcg gcctggagcg
     3361 agatattggt ggcggcgcct ggcttgtttt cgatgatgat cggctggccg agccgttccg
     3421 tcagccactg cgccaggatc cgcgacaccg tatcggccga accgcctgcc ggatagccga
     3481 tgatccagcg gatcggcttt accggataat caagcgctcg cgcgtgctgt ggcaggacag
     3541 gccctgctgc gacggcccca gcgaactgca gaaatcgacg acgagatagt ttcatggtgc
     3601 tgcctcgacg aaatgtaggc tcggcgtcta tcaccataca actctcaccg aatggccgga
     3661 agagcagtcg acggctggaa ccgccaggca aatccgcaaa gcggtttgcg gacgcatcaa
     3721 aacaaatccg cgccggaacg gcgcggacct cgaatggctg cctgttcggt atgacggtag
     3781 gcccgaccgg ccgacttcat ttgcttgcga gcgggacgtt caagtatttc cagccgatat
     3841 tacgaagcct ctcgcgattg gcgggggtat ttccggaacg cgccgccgcg gcggcggcat
     3901 ccgcgaaaac ctgatcgaat tcagctcgcg tcatatggga ttgaccggcg agcgagctca
     3961 cgttcgacca cgcaacgctc gaattgatgg cgaccgcgat gcagagagta atgacagccg
     4021 taaagccgtt gaggagctgg cgcaacatcg acgcctccct tgcccggaag atggactcct
     4081 tggttagtcg ccatgacccg gacaaaggtt caaatggaat tgcacgccgg tgggacgtga
     4141 gcgtcgggcg aaacccatcg aagcggtttc ggatgatgcc gctgaagaca ggtttcgccg
     4201 acgcgcaacc catccttgga tgcccgctat cgcatcgcgg cctcacgtgc gtagtagcgc
     4261 gaggcatagg gtttcggcat aaattccgga tgatagcggc acggcccgtc aacgtgcgtc
     4321 cgcatttgct cgcacgccgt cgcgatcgat tgcgccgtcg gcttggcgcc attttcgatc
     4381 cactgcatca gggcatcgag ccccgccgcc agttccggcg cactttgtgc cgtgtggccg
     4441 cgctcatccg tgaaagcctg taccaagcgg tcgccgctcc cggctgcctt gacggcatcc
     4501 cgataggccg actgtgcctc gaccacgacc tgtggatcgt tgctcgaatg gattgacacc
     4561 accggcaccg gcagcacccc ggtcggatcg ccgtcggcct tgacgatcgc cgccgcggcc
     4621 ggatcggcgt cgaaccggac cacgtcacgg ttcaacgcgt cgtcatcgga tgagccccgg
     4681 tagcggatac cgatgttcga gaatggattg tgcccgcccg cagtattctt caccatgtca
     4741 cggaacaaca gcgttccggc ctgcatgtga cgcaccagca gattttccgg atagcccatc
     4801 acgccgagga tgttcgtgag attctgcttc tgctgatcgc tgcgcaccgc tgccggatgg
     4861 ccgacaccgg tgcattcgtc gaccacggcg tcgaggtcct tcaaggtcat tttggaatcc
     4921 agcgcg
//
LOCUS       DATILV010000292         2870 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1858341, whole genome shotgun sequence.
ACCESSION   DATILV010000292 DATILV010000000
VERSION     DATILV010000292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2870)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2870)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2870
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1858341"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..757)
                     /locus_tag="VLJ17_06675"
     CDS             complement(<1..757)
                     /locus_tag="VLJ17_06675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional enoyl-CoA hydratase/phosphate
                     acetyltransferase"
                     /protein_id="HSV22697.1"
                     /translation="MAQPPAPTQSKYDRLIQRAKEAPAATTVVVHPCDETSLRGPIEA
                     AEAGIIVPILVGPKAKIAAVAGEHRLDIARYSLVDVEHSDQAAARSVELIRESKGELL
                     MKGSLHTDELMRQVTSGATGLRTSRRISHVFIMDVPTYPETLFITDAAINIFPDLDTK
                     RDIIQNVVDLFTQVGLGEPRVAILSAVETVTSKIPSTIEAAALCKMAERGQITGAVLD
                     GPLAFDNAIDLKAARIKGIVSPVAGRAQILVVPD"
     gene            complement(922..1251)
                     /locus_tag="VLJ17_06680"
     CDS             complement(922..1251)
                     /locus_tag="VLJ17_06680"
                     /inference="COORDINATES: protein motif:HMM:NF018151.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HdeA/HdeB family chaperone"
                     /protein_id="HSV22698.1"
                     /translation="MQNASVMKHRLHVYRLPLCLSLAILVTSVGQAQMTIDVAKITCS
                     QLTLLKVDPDYIALWLSGYYNGKRNNTIVDVEQFKELATKVKRDCLYNNQGTVMETVE
                     RLTGPQK"
     gene            1426..>2870
                     /locus_tag="VLJ17_06685"
     CDS             1426..>2870
                     /locus_tag="VLJ17_06685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3300 domain-containing protein"
                     /protein_id="HSV22699.1"
                     /translation="MILWAIRRSAFAFLVAIPCVALAQNPGPGQSPPAAASDQLLKSE
                     ELDALVASIALYPDTLLAEVLMASTYPLEVVEADRWATQNKNLKGDQLKSAVDKQSWD
                     DSVKALAVTPEVLSMMSTKLDWTQKLGDAVLAQQPDIMDAIQRLRAKAQANNKLISTK
                     EQKVTVKQEQNKQVIIIEPTSPDTVYVPYYNPTVVYGGWPYPAYPPYYFPPPGYIAGG
                     IIATGVAFGAGYALGRWASGGNYWGGGVNWGGNTINVNRSVNINNINAGNTWQHNSAH
                     RQGVRYNNTNVQQRFGNNNVRAGTENRMDFRGRSGNQVLNPGGGQGLGDRGAGNRPNV
                     GDRGPGGGGQGLGDRGAGNRPNVGDRGPTQRPSADNRPSSGANRPQRDNAFGNVQSGK
                     TANLQSQRGQASLGGGGAARAGGGGGGGGAARVGGGGGPRAGGGGGGGARGGGGGGRG
                     GGGGGGGGRRSDVALKHDIILLGRLDNGLGF"
BASE COUNT          612 a          794 c          877 g          587 t
ORIGIN      
        1 gatccggcac caccagtatc tgcgctcggc cggcaaccgg cgacacgatg cctttgatcc
       61 tcgcggcttt cagatcgatg gcgttgtcga aggcaagcgg cccatccagg accgcacccg
      121 tgatctgtcc acgttcggcc atcttgcaca gcgcagcagc ttcgatcgtg gagggaatct
      181 tcgaggttac ggtctcgaca gcagacaata tggccacgcg cggctcgcca agaccgacct
      241 gcgtgaacag atcgacgacg ttttgaatga tgtcgcgctt ggtatcgaga tcaggaaaga
      301 tattaatggc cgcgtccgtg atgaacagcg tctcggggta agtcggaaca tccatgatga
      361 atacatggct gatgcgccga cttgtgcgca gaccggttgc cccggaagtc acctgtcgca
      421 tcagttcatc ggtgtgcaag ctccctttca tcaaaagctc gcccttcgac tcgcggatca
      481 attcaacgct acgcgccgct gcttggtcgc tatgttcgac gtcaacgagc gagtagcgcg
      541 caatatcgag gcggtgttcg cctgccaccg ctgcgatctt tgccttcggt cctacgagaa
      601 ttggcacgat gatgcccgct tcggccgcct ctattgggcc gcgcagcgag gtttcgtcgc
      661 acggatgaac cacgacggtc gtcgctgcag gagcctcctt cgccctttgt atcaagcggt
      721 catatttgga ttgagtcgga gctggcggct gcgccatcgg gctcagcccg actgcagcgc
      781 taatgccgat ctcttgcata ttcgcatcct cctaaaacgg gcacattcga gagggcgcca
      841 gcggtcgttg tcctaagaca gaaagcagtt ttaggcatct ggtgcattga catttggcag
      901 gctggacaca gctcaatgga tctatttttg cgggccggta agcctttcaa cggtttccat
      961 cacagtacct tgattattat aaagacaatc ccttttgact tttgtagcga gttctttgaa
     1021 ctgctcgacg tcaacaatcg tattattacg tttgccgttg taatagccgc tgagccaaag
     1081 ggcgatatag tccgggtcga ccttcaatag ggtcaattgg ctgcacgtga tctttgcaac
     1141 gtcaatcgtc atttgtgcct ggccgacgga agtcacgagt attgcgagtg agaggcagag
     1201 tggaagtcta taaacgtgta gcctgtgctt catgacgctc gcgttttgca taactgcctc
     1261 ccgatagaac gagcacgttg caagaataaa ggaaacattc gagcttccca tgacaagaaa
     1321 atgacacgaa accaccgttg catgccacga cgtatcttat gctaataagc tgtgcattcg
     1381 aaagatcgcg gctgcaacag gaattggcgt ggcgggggga tgcagatgat tttgtgggca
     1441 ataaggcgat ccgcgttcgc atttcttgtc gcaataccgt gcgttgcatt ggcgcaaaat
     1501 cccggcccgg gccaaagtcc gccggccgcg gcttctgatc agctgcttaa atccgaggag
     1561 cttgatgcgc tcgtcgcgtc gatcgccttg tatcccgata ccctgctggc tgaagtcctg
     1621 atggcctcga cctatccgct cgaggtggtg gaggccgacc gttgggcaac ccaaaacaag
     1681 aatctcaaag gggatcaatt gaagtctgcg gtggacaaac agtcatggga tgacagcgtc
     1741 aaagccctgg ccgtaacacc cgaggtcctc tcgatgatga gtaccaagct cgattggacg
     1801 cagaagctgg gcgatgctgt tcttgcgcag cagcctgata tcatggatgc gatccaacgc
     1861 ctgcgcgcga aggctcaggc gaacaacaag ctgatctcga ccaaagagca aaaggtcaca
     1921 gtgaagcagg aacagaacaa gcaagtcatc atcatcgagc cgacctcgcc tgacacggtt
     1981 tacgtgccct attacaatcc caccgtcgtc tacggcgggt ggccgtatcc ggcctatcct
     2041 ccgtactact ttcctccccc cggctatatc gctggcggaa ttatcgcgac gggagtagcg
     2101 tttggggccg gatatgccct tggacgctgg gcgtcggggg gaaattactg gggcggcggg
     2161 gtcaactggg gcggcaacac catcaacgtg aaccggtccg tcaacatcaa caacatcaat
     2221 gccggcaaca cttggcagca taattccgcc catcgccagg gtgtgagata caacaacacc
     2281 aatgtgcagc agcggttcgg caataataat gtacgggccg gaaccgagaa ccgcatggat
     2341 tttcgtgggc gcagcggcaa tcaggtgctc aatccaggcg gcggtcaagg gctcggggat
     2401 cgtggggcag gcaaccggcc gaacgttggc gatcgtgggc cgggcggcgg cggtcaaggg
     2461 ctcggggatc gtggggcagg caaccggccg aacgttggcg atcgtgggcc gacccagcgg
     2521 cccagcgccg acaaccggcc ttcatcggga gcaaacaggc cgcagcgcga taacgccttt
     2581 ggaaatgtcc agtccggtaa gaccgcgaac ctgcaatccc agcgcggcca agcgagtcta
     2641 ggtggcggcg gtgcagcacg tgctgggggc ggaggaggtg gtggcggcgc tgcacgtgtc
     2701 ggaggcggcg gcggcccacg tgccggaggt ggagggggag gaggcgcacg cggcggcggc
     2761 ggtggtggtc gcggcggtgg tggcggtggt ggcggtgggc ggcgatccga cgttgcactc
     2821 aagcacgaca ttatccttct cggtcgactc gacaacggcc ttggcttcta
//
LOCUS       DATILV010000293        10476 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3389650, whole genome shotgun sequence.
ACCESSION   DATILV010000293 DATILV010000000
VERSION     DATILV010000293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10476)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10476)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10476
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3389650"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            83..751
                     /locus_tag="VLJ17_06690"
     CDS             83..751
                     /locus_tag="VLJ17_06690"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014497230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HSV22700.1"
                     /translation="MMSWKLVVLGVGLLLGGCIQTTLEPAPTASLKSRDKELLARAPY
                     AQVRIPEPFQRHIVDYHRREAPGTIVIDTDNRYLYLVQADHKAIRYGVTVGEEAQGWS
                     GVAKIGNMTEWPSWTPTPGEHQRLGPLPAYVPGGPQNPMGARALYLYANGKDTLFRIH
                     GTNQPEYIGEAISSGCIRLTNEDVIDLYARVKIGSPVVVLAPGHGDSPYSAKLALTGG
                     TGRE"
     gene            complement(1053..1268)
                     /locus_tag="VLJ17_06695"
     CDS             complement(1053..1268)
                     /locus_tag="VLJ17_06695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22701.1"
                     /translation="MRVMTLGVAAILAVGLSASALAAKKKSAATVDSFEKCEQLAIDR
                     GVPHGQAGHTSFVQQCMGKPPVNKQPG"
     gene            complement(1414..2796)
                     /locus_tag="VLJ17_06700"
     CDS             complement(1414..2796)
                     /locus_tag="VLJ17_06700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase"
                     /protein_id="HSV22702.1"
                     /translation="MLTNLAVRDVETLVHPYTNLATFRDVGPLVIERARGVYVYDTEG
                     KGYIEGMAGLWCTALGYGNEELVEAAATQMRKLSFAHLFTGRSHDPAIELAEKLKEIA
                     PIPVSKVFFCCSGSEANDTQMKLVWYMNNALGRPKKKKILSRQRAYHGVTIAAASLTG
                     LPTNHADFDLPIAGVVHAECPHYYRNGAEGESEEEFAARLAAQLEELILREDPETVAA
                     FIAEPVMGAGGVVVPPPTYFPNIMKVCEKYDLVMIADEVITGFGRLGRMFGSEVVGYR
                     PHAISIAKALSSAYLPIAGVLVPPRIYDALLDESRKIGVFGHGFTYSGHPVAAAVALK
                     TLEIFARDRIVDKVVALMPQFRAGLNRLGEHPLVGEARGLGLVGGVELVADKRTKRPF
                     DPKLGVAARCVAAAQAEGLIVRAVFGDTVSLCPPLIISAQELDLLFERLGRALDRTLE
                     WARNERLIAA"
     gene            complement(2802..3620)
                     /locus_tag="VLJ17_06705"
     CDS             complement(2802..3620)
                     /locus_tag="VLJ17_06705"
                     /inference="COORDINATES: protein motif:HMM:NF018597.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extensin family protein"
                     /protein_id="HSV22703.1"
                     /translation="MNQVKVDGLIAAGAAIIGAALLSVALSTGAVAQSDSVAVPTICQ
                     MRLSADRSVFTPLGELGGPAGCGGPDVVHLERIILADRSEVTVEPPATLRCEIAEAIV
                     FFVRQDLAPAAATLGSPLSAIENFDSYDCRGRNRVAGAKLSEHGLANALDIRSIRLKD
                     GRVVRPADSSAPREFRVAMKAAVCNRFTTVLGPGSDGYHEDHIHMDRAERRGGYRLCQ
                     WDLHDRAGADVVQTTGALAGAGVAPPLILVPLPRSRPFVAVGPHAVLPPDESRP"
     gene            3718..4866
                     /gene="solA"
                     /locus_tag="VLJ17_06710"
     CDS             3718..4866
                     /gene="solA"
                     /locus_tag="VLJ17_06710"
                     /EC_number="1.5.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050131 - N-methyl-L-amino-acid oxidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-methyl-L-tryptophan oxidase"
                     /protein_id="HSV22704.1"
                     /translation="MHFFDAAIIGLGVMGSAALAALARRGQRVVGIDRFAGGHDRGSS
                     HGTTRVIRLGYFEHPSYVPLLRAAYPLWRELETRSGQSLLSVTGILEMGAPDSDLVAG
                     TLRSARLHNLAHEILDAPTLVKRFPAFCLPEHFAGVFQPDGGFVRAEPTVAALQTLAQ
                     RCGAQLRMEARVVAVEPHRDGVLVKAEHDDILAGCAIVAAGPWLKSVLPQLPVPIRVT
                     RQVLGWFEPTDRARAQFAAGRFPVFLLQNPDGIFYGFPAEADGVKVAKHHHVDEAVDP
                     DHYDRTVSAGDEAMIRIALHAHLPDADGRLLAARTCLYTMTPDGDFILDRLPGYPQII
                     VASPCSGHGFKFAPVIGEILADLAVTGRTVHDISRFSLARFMKPGAVM"
     gene            5087..6721
                     /locus_tag="VLJ17_06715"
     CDS             5087..6721
                     /locus_tag="VLJ17_06715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty-acid--CoA ligase"
                     /protein_id="HSV22705.1"
                     /translation="MLGLMQDWPLLCHRVIDHAATYHGARKVVSRSVEGPVHTTNYAE
                     IRARALKVAQRLERDGIRLGDRVATLAWNTWRHLETWYGILGIGAIYHTVNPRLFAEQ
                     IVWIINHAEDRVAFVDLTFVPLLEKLADKLPTIERYIVLTDANHMPPTTLRNAVAYEA
                     WIAEADGDFAWKSFDENTAAGMCYTSGTTGNPKGVVYSHRSNVLLALCAIQPDAIGMS
                     SRDTVMPVVPFFHANGWTLAFSAPLAGASIVMPGMKLDGASVYEMLTAHKVTCTAAVP
                     TVWMMLLQYLESNSGKLPDLKRVVIGGSACPRTMAQKFQEVYGVQVIHAWGMTEMSPL
                     GSLCTLKPEYASLTGDAKLDILQKQGHPPFMVEMKIEDDAGRPVPWDGKSFGRLMVRG
                     PAVARAYYRGEGGDILDPEGFFDTGDVATLDPQGYMQITDRSKDVIKSGGEWISSIDL
                     ENLAVGHPKVAEAAVIGIHHPKWGERPLLVVVMKKGEAIGKDDMLGYMRGKIASWWMP
                     DDVVFVAEIPHTATGKIQKTTLRERFKDFQFPVAGV"
     gene            6808..7050
                     /locus_tag="VLJ17_06720"
     CDS             6808..7050
                     /locus_tag="VLJ17_06720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22706.1"
                     /translation="MFVRAFGANLMYKVGGDPHAVGVLLLRVSGNPGAVPHFLFDHPQ
                     AQERADAIARMARPSPLIVLLMPSEWAALKSICTGG"
     gene            7057..7908
                     /locus_tag="VLJ17_06725"
     CDS             7057..7908
                     /locus_tag="VLJ17_06725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012042648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1499 domain-containing protein"
                     /protein_id="HSV22707.1"
                     /translation="MSLVMSRLRAVEEPPSRLAIWARRIAVFSLAVAAMAIIIQRADL
                     LEIVPVLVTFGAALVLAILAILFAFASFVVLWNNGGPGFAQAITAVLIGAGLLGYPGY
                     LAYKGRQLPAIKDITTDPIDPPRFEVVARLRPPNSSLYPGRDSAELQREAWPDIEPLL
                     VAVSPKAAYDGALAVMTKRKWRIVDARPPSPNREGHIEAIARTPIMGFRDDVAVRIRA
                     AREGAKIDIRSASRYGTTDFGTNATRVLALLDDIDDAATPEKPDRQERARSAPKASAK
                     PGQGGKR"
     gene            complement(7890..8804)
                     /locus_tag="VLJ17_06730"
     CDS             complement(7890..8804)
                     /locus_tag="VLJ17_06730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSV22708.1"
                     /translation="MSEDIPFNRVLNLTPGAVDHVAPGVRRILADNPGPFTFKGTLSY
                     IIGRGNVAIIDPGPADEQHTAALLEAVRGETVTHIVITHTHRDHSSGAAPVKAATGAP
                     TYGEGPHRPARPLFIGETKRLDAGGDTDFVPDHRLADGDIITGDGWALEAIATPGHTA
                     NHMAFALKGTEMLFSGDHVMGWSTSIVAPPDGSMSDYMASLDRLAARPETVYLAGHGD
                     IIRDAPEFVARYIVHRRGREASILHRLGKGETDIPSLVRAIYIGLDRRLAGAAGLSTL
                     AHLEDLTARGLVATDGAPSISGRYRLPP"
     gene            8894..9166
                     /locus_tag="VLJ17_06735"
     CDS             8894..9166
                     /locus_tag="VLJ17_06735"
                     /inference="COORDINATES: protein motif:HMM:NF020031.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HSV22709.1"
                     /translation="MGMILLEYAAKVVMAERGIRVARGALVRSTADLDVDFAPPMMVK
                     AQVPVGGRGKAGGVIRAADATALAQAVGRLTGTTIKGGCVDALSRR"
     gene            10117..10404
                     /locus_tag="VLJ17_06740"
     CDS             10117..10404
                     /locus_tag="VLJ17_06740"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSV22710.1"
                     /translation="MRRARALLYRACASVKFPDPLLTAAAKVFCSEMAVRVTGDAVQI
                     HGGYGFTDEFAVSRFYRGACYGSLGGGTSETLRDLIGKRLIADVSNTNGIF"
BASE COUNT         1963 a         3217 c         3304 g         1992 t
ORIGIN      
        1 tgaaactaga attagaaacg agattcgact attcctttgt agatgatacc ttgaacctgc
       61 gggcatggca gcaaagaggc ggatgatgtc ttggaagttg gtagtccttg gcgttggatt
      121 gttgctgggt ggctgcatac agacaacact tgagccggca cctacggcat cactgaaatc
      181 acgtgataag gagttgctcg ctagagcgcc ctacgcccag gttaggatcc ccgagccgtt
      241 ccagcgccac atcgtggact atcaccgccg ggaagcgccc gggacgatcg ttatcgatac
      301 cgacaatcgc tatctctatc tggtccaggc ggaccacaag gcgatccgtt acggagtaac
      361 ggtcggtgag gaggcgcagg gctggtccgg cgtcgccaag atcggcaaca tgacggagtg
      421 gccgagttgg acgcccaccc caggggaaca tcagcgtctc ggcccgttgc cggcatatgt
      481 gccgggcggt ccgcagaatc ccatgggggc gcgcgccctg tacctctatg ccaatggcaa
      541 agacacgctg ttccgcatcc acggtaccaa tcagcccgaa tatatcggcg aggctatctc
      601 gtcgggctgc atccgcctca ccaatgagga cgtgatcgac ctgtacgctc gggtgaaaat
      661 tggcagtccg gtggtggttc tggcgcctgg ccatggcgat tcgccctata gcgccaagct
      721 ggcgctcacg ggcggaactg gaagggaata aacgtttcta acgactggcg tcgggtgcgt
      781 tgagcgggtg cgaaaccgcg cgcgcacgca taggcgtttc gcttcgctta aacccgccat
      841 cctatttgct cggctattgg ttatgccttc cgggttctgg caaaagcgcg cccctgaaaa
      901 tgccccgttg atgacgaaac gtcagcgcca taaggcaggc gtcaaggttt agcaatcatc
      961 gtgcgaccgc cgatgttctc cgccgtttga caccggagag catcggcggt cgctaaaaac
     1021 aagacgcaag attaccgctg cacggtgcct gatcagccgg gttgcttatt gaccggcggc
     1081 ttgcccatgc attgctgcac gaacgaggta tgacctgctt gcccgtgcgg cacccctctg
     1141 tcgatggcga gttgttcgca tttctcgaac gaatcaaccg tggcagcgga ctttttctta
     1201 gccgccaaag ccgaagcact gaggccgacc gccagaatgg cggcgacgcc gagcgtcatg
     1261 acgcgcatga tattctcctt gagctatttg caagagcccc cacagcagcc caagcacacg
     1321 caacatgaac gcaatctgaa tgagcatttc gagcgccgag accgcaaatg gccgacagcc
     1381 accgtcgcgc cgcggcggga tcgcacggct agctcacgcg gcgatcagcc tctcatttct
     1441 cgcccattcc agagtgcggt cgagggcccg acccagccgt tcgaacaaca gatcaagttc
     1501 ttgcgccgag atgatcagcg ggggacacag cgaaaccgtg tcgccgaaca ctgcgcgcac
     1561 gatcaggcct tcggcttggg ctgcagcgac acagcgtgcc gcgacgccga gcttgggatc
     1621 gaaggggcgt ttggtgcgtt tgtcggccac gagttcgacc ccacccacga gcccgagacc
     1681 gcgcgcctcg ccaacgagcg ggtgctcgcc gagccggttc agcccggcgc gaaactgcgg
     1741 catcagcgcc accactttgt cgacgatgcg atcgcgggcg aagatttcaa gggttttgag
     1801 cgcgacggct gccgccaccg gatggcccga ataggtaaat ccgtggccga agacgccgat
     1861 cttccggctc tcgtcgagca gcgcatcata tatgcgcggc ggcaccaata cgccggcgat
     1921 cggcagatag gctgaagaca gcgccttcgc gatcgagatc gcgtgcggac gatagcccac
     1981 cacctcgctg ccgaacatgc ggccgagccg gccgaagccg gtgatcactt cgtcggcgat
     2041 catcacgaga tcatactttt cgcacacctt catgatgttc gggaaatagg tcggcggcgg
     2101 cacgaccacg ccgccggcac ccatcacagg ctccgcaata aaagccgcga ccgtctcggg
     2161 gtcctcgcgc aagatcaatt cttcaagttg tgccgcgagg cgggcggcga attcctcctc
     2221 gctctcgcct tcggccccgt tacggtagta atgcgggcat tcggcgtgga cgacgccggc
     2281 aattggcaga tcgaaatccg catggttggt cggcaggccg gtgagcgagg ccgccgcaat
     2341 cgtgacgccg tgataggcgc gctgacggct caagatcttc tttttcttcg gccggccgag
     2401 cgcgttgttc atgtaccaaa cgagcttcat ctgggtatca ttggcctcgg agccagaaca
     2461 gcagaagaag accttggaga ccggaatcgg tgcaatttcc ttgagcttct cggcaagctc
     2521 gattgccgga tcgtggctgc ggccagtgaa cagatgcgcg aaggagagct tgcgcatctg
     2581 cgtggcggcg gcctcgacca gctcttcgtt gccatagcca agcgcagtgc accacaggcc
     2641 ggccatgcct tcgatgtagc ccttgccctc ggtgtcgtag acgtaaacgc cgcgggcgcg
     2701 ctcgatgaca agcggcccca cgtcacggaa tgttgccaga ttggtgtagg gatggaccag
     2761 agtttcgacg tcgcggaccg cgagattggt gagcacattc atcaggggcg gctttcgtca
     2821 ggaggcaaca ccgcgtgagg accgacggcg acgaacggcc gcgaacgcgg caacggtacc
     2881 aaaatgagcg gcggcgcaac accagcgcct gcaagcgcac ctgtggtttg caccacgtca
     2941 gcacccgccc ggtcgtgcag atcccattga cacaggcggt atccgccacg acgttcggcg
     3001 cgatccatgt ggatgtggtc ttcgtgataa ccgtcggagc cagggccaag cacagtggta
     3061 aaacgattgc agacggcggc tttcatggcg actcgaaact cccgcggtgc gctcgaatcg
     3121 gccggccgca ccacgcggcc gtctttgagt cggatcgagc gaatgtcgag cgcgttggcg
     3181 aggccgtgtt cactcaattt ggcgcctgca acgcgattgc ggccgcggca gtcgtaggaa
     3241 tcgaagtttt cgatcgcgct cagcggtgac cccaaggtgg cagccgccgg cgccaagtcc
     3301 tggcgcacga aaaacacgat agcttctgct atctcgcaac ggagcgtggc gggcggctcg
     3361 accgtgacct cgctgcgatc cgccagaatg atgcgttcca ggtggacaac atcaggtcca
     3421 ccgcatccgg ccgggccgcc caactcgcca agcggcgtga acacggagcg gtcagccgac
     3481 aagcgcatct ggcagatggt ggggaccgcg accgagtcgg attgcgcaac cgcgccagtg
     3541 ctcaacgcga cgctgagcaa ggcggcgccg atgatggcgg caccggctgc tatgaggcca
     3601 tcgactttca cttgattcac ggtctttcga gctgccggta tactcgcgat agctggtgga
     3661 aggtgaaccg gcaaatgttg cggtagcata atctcaattc gtcgggaacc tacggccatg
     3721 catttcttcg atgctgcaat catcggtctt ggcgtcatgg gtagcgcggc gctcgctgcg
     3781 ctagcccggc gcggccagcg cgtggtcggg atcgaccgct ttgcgggggg gcatgatcgc
     3841 ggctcttcgc acggtacgac ccgcgtcatc cggctcggct attttgagca cccgtcctat
     3901 gtgccgttac tgcgtgccgc ctatccgttg tggcgcgaac ttgaaacacg ctcgggccaa
     3961 tcgctcctct ccgtcaccgg tattctagag atgggggcac ccgatagtga cctcgtcgcc
     4021 ggcacgctgc ggtcggcgcg gctgcataac ctcgcccacg aaattctcga cgcaccgacc
     4081 ctggtgaagc gtttcccggc gttttgcctg ccggagcatt tcgccggcgt gttccaacct
     4141 gacgggggct ttgtgcgggc agagccgacc gtcgcggccc ttcagacgtt agcccaacgt
     4201 tgcggagcgc aactgcgcat ggaggcacgc gtggttgcgg tcgaaccgca ccgcgacggc
     4261 gtgctggtga aggctgagca tgacgacatt cttgccggat gcgccatcgt ggcggcgggg
     4321 ccatggctaa aatcggtgct gccgcaattg ccggtgccga tccgggtgac ccgccaggtg
     4381 ctgggctggt tcgagccgac ggatcgggca cgggcacagt ttgcggctgg gcgttttccg
     4441 gttttccttt tgcaaaatcc ggacggcatc ttttacggat ttccagccga agccgacggc
     4501 gtcaaggtcg ccaaacacca ccatgtcgac gaggcggtcg atcccgacca ctacgaccgg
     4561 acggtgtctg ccggcgacga ggccatgata cggattgcgc ttcatgccca tctgcctgac
     4621 gcagacggcc ggctccttgc agcgcgcacc tgtctctaca ccatgacgcc ggacggcgac
     4681 ttcattctcg accggttgcc cggatacccc cagatcatcg tcgcatcgcc gtgctcagga
     4741 cacggcttca agttcgcccc agtgatcggt gaaattctgg ccgatcttgc cgtcacgggc
     4801 cgcacggtcc acgacatttc gcgcttctcg ctcgcacgtt tcatgaaacc aggtgccgtt
     4861 atgtagggca gaggacggcg aaacccctcg gcggtcgcgt ttacggaaaa cagccatagt
     4921 ttcgcaaagg ctcatcctac gcagacgatt ttcctcaatc ccccgcgacc acttgccctt
     4981 agctttcggc gatcggccgg ttgcatgccg tgccggcatt gctaggctga agtcaaagga
     5041 ccggtcgccc gccaacggac aaggccggcg cagttgagga aaccacatgc ttggattgat
     5101 gcaggactgg ccgctgctgt gccatcgggt gatcgaccac gcggcgactt accatggcgc
     5161 ccggaaggtg gtttcgcgtt cggtggaggg accggtccac accaccaact acgccgagat
     5221 tcgagcgcgc gccctcaagg tcgcccaacg ccttgaacgc gacggcatca ggctcggcga
     5281 tcgggtggcg acgctcgcct ggaacacctg gcggcatctc gaaacgtggt atggaattct
     5341 cggcatcggc gccatttatc acacggtcaa tccgcggctg ttcgccgagc agatcgtgtg
     5401 gatcatcaat cacgccgagg accgcgtcgc ctttgtcgac ctcaccttcg ttccgcttct
     5461 ggaaaagctc gccgacaagc tgccgacaat cgagcgctac atcgtgttga cggacgccaa
     5521 ccacatgccg ccgaccacgc tgcgcaacgc cgttgcctat gaggcgtgga tcgccgaggc
     5581 ggacggcgat tttgcctgga aatcgttcga cgagaacact gccgccggca tgtgctacac
     5641 ctccggcacc acgggaaatc ccaagggcgt cgtctactcg caccgctcta atgtcctttt
     5701 ggcgttatgc gcaatccagc ccgatgccat tgggatgtcc tcgcgcgaca ccgtgatgcc
     5761 ggtggtgccg ttcttccacg ccaatggctg gacgctcgcc ttttcggccc cgctggctgg
     5821 cgccagcatt gtaatgccgg gcatgaagct cgacggcgcg tcggtctacg aaatgctgac
     5881 cgcccacaag gtgacctgca cggcggcggt gccgacggtc tggatgatgc tgttgcagta
     5941 tctcgaaagt aacagcggca agctgcccga tctcaaacgg gtggtaatcg gcggctctgc
     6001 gtgtccgcgc actatggcgc agaaattcca ggaggtttac ggcgtccagg tcattcacgc
     6061 gtgggggatg accgagatgt cgccgctagg ctctctgtgc acgctcaagc cggaatatgc
     6121 gtcccttact ggggacgcca agctcgacat cttgcagaag caaggccatc cgcccttcat
     6181 ggtcgaaatg aagatcgagg acgatgccgg ccggccggtg ccatgggacg gcaagtcgtt
     6241 cgggcgcctc atggtgcgcg ggcctgcggt ggcgcgcgcc tattacaggg gcgagggcgg
     6301 cgacattctc gaccctgagg ggtttttcga tactggcgac gtcgccacgc tggaccccca
     6361 gggctacatg cagatcaccg accgctccaa ggacgtgatc aaatcgggcg gggaatggat
     6421 ttcttcgatt gatctggaaa atctcgcagt cgggcatccc aaggtggccg aagccgccgt
     6481 tatcggtatt caccatccca aatggggcga gcgcccgttg ctggtggtgg tgatgaaaaa
     6541 aggcgaagcc atcggcaagg acgacatgct cggctacatg cgcggcaaga tcgcgagttg
     6601 gtggatgccc gacgacgtgg tcttcgtcgc cgaaatcccc cacacggcga ctggcaagat
     6661 acagaaaacg actctgcgcg agcgcttcaa ggattttcaa tttcccgtgg ccggcgtatg
     6721 actgcttaac cggcggtcat ccgactgagt ccataccggg ggggcatccg accttacgaa
     6781 gattcggatc ttgacgcggt tggcacgttg tttgtccgcg cattcggcgc taacctgatg
     6841 tataaggtcg gcggcgaccc gcatgcagtc ggtgtccttc tgctgcgtgt ttccggcaat
     6901 ccgggagcag taccgcactt cttgtttgat cacccgcaag cacaggagcg cgccgatgcg
     6961 atcgcccgga tggcgcgacc gtcgcccctg atagtgctat tgatgccgtc cgaatgggcc
     7021 gcgctcaaga gcatctgcac cggaggatga cccgcaatgt ccctggtcat gtcccgcttg
     7081 cgtgcagtag aggaaccacc ttcccgtctc gccatctggg cgcgccgcat cgccgtgttc
     7141 tcgctcgcgg tggcggcgat ggccatcatc atccagcgcg cggacttgtt ggagatcgtt
     7201 cccgtgctgg tcacgttcgg ggcggcgcta gtgcttgcca ttctggcaat cctgttcgct
     7261 ttcgcctcgt ttgtggtgct gtggaacaat ggcggccctg gctttgcaca ggccatcacg
     7321 gcggtgctga tcggcgctgg gctgcttggc tatccgggtt atctcgccta caaggggcgt
     7381 cagctgcccg ccatcaaaga catcaccacc gacccgatcg atccgccgcg tttcgaggtg
     7441 gtggcgcgcc tgcggccacc gaacagcagt ctctatcccg gccgcgacag tgctgaattg
     7501 cagagggagg cgtggccgga tatcgaaccg ctgctcgttg ccgtgagccc caaggctgca
     7561 tacgacggtg ccttggcggt tatgaccaag cgcaaatggc gcatcgtcga tgcgcgcccg
     7621 ccgtcgccta atcgcgaggg acacatcgag gctatcgcgc gtaccccgat catgggattc
     7681 cgtgatgatg tggcggtgcg cattcgcgcg gcgcgcgagg gtgcaaaaat cgatatccgc
     7741 tcggcgtcgc ggtacggcac cacggatttc ggcaccaacg cgacccgcgt gcttgcactg
     7801 ctcgacgaca tcgacgatgc cgcgacgcct gaaaagcccg atcgacagga gcgcgcgagg
     7861 tcggccccga aggcgtcggc caagccgggt caaggcggca agcgataacg gccggatatg
     7921 cttggagcac catcggtggc gacgagcccc cgcgcggtca gatcttccag atgcgccagt
     7981 gtcgacaacc cggcggcgcc cgccagtcgc cgatcgagcc cgatatagat tgcccgcacg
     8041 agacttggaa tatcggtctc gcccttaccg aggcggtgca aaatcgacgc ctcgcggcca
     8101 cggcgatgca cgatgtagcg ggcgacgaat tccggagcat cgcggattat gtcgccatgg
     8161 ccggcaagat agaccgtctc cggccgtgct gcgagccgat cgagcgaagc catgtaatcg
     8221 ctcatggatc catccggtgg cgccacgatc gaggtcgacc agcccatcac gtggtcacca
     8281 gaaaacagca tttcggtgcc cttgagggcg aaagccatat ggttcgcggt gtgccccggc
     8341 gtcgcaatcg cttcaagcgc ccagccgtcg ccggtaatta tatcgccgtc ggcgaggcga
     8401 tggtccggaa caaagtcggt gtcaccgccg gcgtcgagtc gtttggtctc gccgatgaac
     8461 agcggtcgcg ccggccgatg cggcccctcg ccgtaggtgg gggcgccggt tgcggctttg
     8521 acgggcgccg cgcccgaaga atgatcgcga tgggtgtggg tgatgacgat atgcgtcacc
     8581 gtctcgccgc gtacagcctc gagcagcgcc gcagtgtgct gctcgtcggc aggcccggga
     8641 tcgatgatcg cgacgttgcc gcgaccgatg atatagctga gcgtcccctt aaacgtgaac
     8701 ggtcccggat tatcggccag gatacgccgt acgccgggcg cgacatggtc gacggcgccg
     8761 ggggtgaggt tgagaacgcg attgaacgga atgtcttcgg acatggtttt cgatgagttc
     8821 caaggccctc tgagttctca cccccgtcgt cgcccgggaa tttaccccat aaatcgctgc
     8881 tttttgtaag atcatgggaa tgattctgct cgaatacgct gcaaaggtcg tcatggccga
     8941 gcgaggcatc cgggttgcgc gcggcgccct cgtccgctcg accgccgacc tggacgttga
     9001 tttcgcgccg cccatgatgg tcaaggcgca ggtgccagtt ggcggacgcg gcaaggccgg
     9061 tggtgtgatc agggccgcgg atgcgacagc gcttgcgcag gcggtcgggc gcttgacggg
     9121 taccaccatc aagggcggat gcgtggatgc cttgtcgagg agatagcgac gggccgcgaa
     9181 tgcttcatcg ggttcacgct cgacgaggca agcggcgacg tcgacgtttt gctgtccgat
     9241 aggcggcgtc gatgtcgagg tgcgcggccg ccgcataacg accgaacgcg cctatttcgg
     9301 tccggcagcg tgccgcgacg cggccctgcg gttcacgact cagacatccg agccggcggg
     9361 ggtgtgaagc aagacgggca cgtcggagtc gaagtgcgcg gcgctcacca ccctggattt
     9421 ggtgttcgcc cacttgtgtg accttgtcga gcgtcatgtc acaaagcccg ctgtgataag
     9481 ataacaaagg aagacacatc gcgttcttaa cattaacatg ggataacatg cctcgcggag
     9541 ctcggggtcc tcggcatggc ccgaaccgta cggcggcctt ggcgcgactg tgcttgatgc
     9601 gcgcttgtgc tcgaggagat cgccaaggcc tgctacgtca ccgccatggc gacgctcggc
     9661 gaggtctcgc atcatcgcga cgtacgcgcc ggaggcgatc aaacaacacc tcctgccggg
     9721 cgtatgcaac ggcgagcacg cgctggcgat tcttcttaat gtcgacgttg gtgagataac
     9781 tagcgacgtc agtgccggcc cgggcgcgat ggcattggct gcgttctggt cgaacgcgag
     9841 acgccgggct tcgaaatcac cggccgctat cacaccatgc gcggcgaatt cctgcacaag
     9901 atccgcttca ccgattgtga actttcgctt gaccatgtgg tcgtgcgcga tgatgggttc
     9961 cgacggctgc tgtcggcctt caatacgcag cgcttatcaa tccgagcata tcgctgggtt
    10021 tggcggaggg cgccctcgca ccgcatttgg tggtccgatc ggacgatttc agagtatgcg
    10081 gtggaaactc gccgacatgt ataaggatta aggatattga ggcgggcccg agcgcttctc
    10141 tatcgggctt gcgccagtgt caagttcccg gacccgttgt tgaccgcggc cgcaaaggtg
    10201 ttctgcagcg aaatggcggt ccgagtcacg ggcgacgcgg tccagatcca tggcggatac
    10261 ggcttcaccg acgagttcgc cgtctcacgc ttttaccgcg gcgcctgcta cggatcgctc
    10321 ggcggcggca catccgaaac cctacgtgac ctcatcggca agcgcttgat agccgatgtc
    10381 agcaatacga acggaatttt ttaagctctt ggagccttga gtttcgccct tcgaacgcgc
    10441 caatcacggc gctccgaagg tgcggcggca gcctac
//
LOCUS       DATILV010000294         5144 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3390040, whole genome shotgun sequence.
ACCESSION   DATILV010000294 DATILV010000000
VERSION     DATILV010000294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5144
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3390040"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(18..1103)
                     /gene="nirK"
                     /locus_tag="VLJ17_06745"
     CDS             complement(18..1103)
                     /gene="nirK"
                     /locus_tag="VLJ17_06745"
                     /EC_number="1.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014492464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050421 - nitrite reductase (NO-forming)
                     activity [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper-containing nitrite reductase"
                     /protein_id="HSV22711.1"
                     /translation="MTIARAAIISAAFAGLATTPTYANEPALERQKVELVAPPFVHPH
                     EQATQQKPKIVEFRMEAQEKEIVIDDEGTKLWAMTFNGSVPGPMMVVHEGDYVELTLV
                     NPATNAMPHNIDFHAATGALGGGTLTSIGPGEQVVLRWKATRTGVFVYHCAPGGMMTP
                     WHVVSGMSGAVMVLPRDGLKDGDGKPLHYDRIYYIGENDFYVPRDETGKFKSYASAGA
                     DFADTLEVMRKLTPTHVVFNGRANALTGKAALTANVGETVLIVHSQANRDSRPHLIGG
                     HGDYVWETGKFANRPETDLETWLIRGGSAGAALYTFRQPGIYAYLTHNLIEAVQLGAT
                     AHFKVEGKWNDDLMMQVRPPEPTVALR"
     gene            complement(1223..1411)
                     /locus_tag="VLJ17_06750"
     CDS             complement(1223..1411)
                     /locus_tag="VLJ17_06750"
                     /inference="COORDINATES: protein motif:HMM:NF012862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22712.1"
                     /translation="MRHIATPGIEINELFRLVRGDVLAATGRKQEPFVYGSLPGEVFY
                     FAAPVMRLFCGQTSNCLT"
     gene            complement(1443..1835)
                     /locus_tag="VLJ17_06755"
     CDS             complement(1443..1835)
                     /locus_tag="VLJ17_06755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22713.1"
                     /translation="MSPAILPKEKFVEALRAFARLSEQANWALVYYADHGMELNGINY
                     LIAVDARLETDRDVQFEALPLDQLRSLRAKARASCASFCLTPAAKIRSPARCAAPLPR
                     ARSDAAQEPDGGTLVAYAAKHGEDRARR"
     gene            complement(1813..1941)
                     /locus_tag="VLJ17_06760"
     CDS             complement(1813..1941)
                     /locus_tag="VLJ17_06760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22714.1"
                     /translation="MIGNSNYRAVGVLPNAQHDADAVAAALHQVGLATVNVASDFA"
     gene            complement(2091..2525)
                     /locus_tag="VLJ17_06765"
     CDS             complement(2091..2525)
                     /locus_tag="VLJ17_06765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HSV22715.1"
                     /translation="MTSYDPTNVFAKILRGELPSHKVYEDDGAFAFLDIMPRAPGHTL
                     VIPKTPARNILDVAPDDFVHVMKVVQKIARAGMKVFQADGVTVQQFSEPAGGQVVFHL
                     HVHVMPRKAGVPLKPPASVKEDPAILSDQALKLATALKGSVS"
     gene            complement(2628..3812)
                     /locus_tag="VLJ17_06770"
     CDS             complement(2628..3812)
                     /locus_tag="VLJ17_06770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSV22716.1"
                     /translation="MLPAIGDIAAASWDACAGGAGANPFTRHAFLAALEASKSATART
                     GWQPQHLVVETTDGCAIGVAPCYLKSHSRGEYVFDRGWAEAYEHAGGSYYPKLQVAVP
                     FTPVTGRRLLVAPGADVDTARVTLARGLVELTKLRNASSAHITFMTEMESRALGECGF
                     LLRTDQQFHWENRGFGSFDDFLAALSSRKRKTIRRERRDALTAGIEVVWLTGADLTEA
                     AWNAFFAFYMETGSRKWGRPYLTREFFSLIGQAMANETVLIMARRAGRFIAGAINFVG
                     DGTLFGRHWGAIEHHPFLHFEICYYQAIEYAIAHRLGRVEAGAQGEHKLARGYLPNTT
                     YSAHYIADPGFRRAIDDYLNRERAYVEAAGQELREASPFRKCLGGEHLAKQELADEDA
                     GF"
     gene            4179..4883
                     /locus_tag="VLJ17_06775"
     CDS             4179..4883
                     /locus_tag="VLJ17_06775"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HSV22717.1"
                     /translation="MKRLAVVLFGAAGVSLGLATTVLAADLGRPAMPTKAPAMIVADD
                     WAGFYIGGHLGGAWAKSGYSYDDGATIEAFSFSPSSIIGGGHLGVQGQWGTWVLGVEG
                     SFDGTDLSQTAIGVNTTQSLKIDDIATVTGRLGYALPQWLFYVKGGWAGVHEKNSSTQ
                     VGATHSFTDWNSGYTVGGGIEYKWTRNWVLGTEFNFYNAKFDHNGLDSSGVAVRVFNS
                     NADIYSVLLRASYLFK"
BASE COUNT          986 a         1508 c         1597 g         1053 t
ORIGIN      
        1 cgcactcacc tgacagccta tctcaaggcc acggtcggct ccggcggccg cacctgcatc
       61 atcaggtcat cgttccattt gccttcgact ttgaagtgcg cggtcgcgcc gagttggacg
      121 gcctcgatca gattgtgcgt gagataggcg tagatgccgg gctggcggaa cgtatagagc
      181 gccgcccctg ccgagccacc gcggatcagc caggtttcaa gatcggtctc gggtcggttg
      241 gcaaatttgc cggtctccca cacgtaatca ccgtggccac cgatcaggtg cggacgtgaa
      301 tcgcggtttg cctgcgagtg cacgatcagc acggtttcgc cgacattggc cgtcaaggcg
      361 gctttgcctg tgagcgcgtt cgcccgaccg ttgaaaacca catgcgtcgg tgtcagcttg
      421 cgcatcacct cgagtgtgtc cgcaaaatcc gctccggcag atgcgtagga cttgaatttg
      481 cccgtctcat cgcgcggcac atagaagtca ttctcgccga tgtagtagat acgatcataa
      541 tggagcggtt tgccgtcgcc gtccttgaga ccatcacgcg gcaacaccat cacggcgccg
      601 ctcatgcccg ataccacatg ccacggcgtc atcattccac caggcgcgca gtgataaacg
      661 aacacgcccg ttcgggtcgc cttccaacgc agcacgacct gctcaccggg gccgatcgac
      721 gtcagcgtcc cgcctccgag tgcaccggtg gcggcatgga aatcgatgtt gtggggcatt
      781 gcgtttgtgg cggggttgac gagcgtgagc tcgacgtaat caccctcgtg aacgaccatc
      841 atgggccccg ggaccgagcc gttgaacgtc atcgcccata gctttgtgcc ctcgtcgtcg
      901 atgacgattt ctttctcttg agcttccatc cggaattcga cgatcttcgg cttctgctgc
      961 gtcgcctgct catggggatg gacgaatggt ggtgcaacaa gctccacctt ctggcgttca
     1021 agggcgggct cgttcgcata cgttggtgtt gttgcgaggc ctgcgaacgc ggcgctgata
     1081 atggcggctc ttgcaatcgt caatgatttc atggcgaagg gtcctctctg gcatgaaaat
     1141 tcctccgccc gcgccttctg gtggcgcctt gggatgctac actaccctgc catgcgtgcg
     1201 gaagggtgac atattgtttg actcaggtca gacaatttga agtttggcca caaaataacc
     1261 tcatcaccgg cgcggcgaaa taaaaaacct ctcccggcag cgatccgtag acgaaaggtt
     1321 cctgcttgcg gccggtcgcc gccaatacgt cgccacggac gaggcggaag agctcattga
     1381 tctcgatccc tggcgtggcg atgtggcgca ccagggcggt gacgaagggg ctgttgccac
     1441 cgtcaccgtc gagcgcgatc ttcgccgtgc ttggccgcat aggcgacaag tgtgccgccg
     1501 tcgggctcct gggccgcatc cgaccgagcg cgaggcaagg gtgcggcaca tctggcgggc
     1561 gagcggattt tcgcggcagg cgtcaagcag aatgatgcgc agcttgcgcg cgccttcgcc
     1621 cgcaagctgc gcaactggtc gagcggcaga gcctcgaact gcacatcgcg atcggtttca
     1681 agccgcgcgt cgaccgcaat gagatagttg atcccattta attccatacc gtggtcggca
     1741 taatagacga gcgcccaatt ggcctgttcg gaaagccgcg caaaggcgcg tagcgcctcg
     1801 acgaatttct ccttaggcaa aatcgctggc gacattcacg gtcgcgaggc cgacctggtg
     1861 caacgcggcc gcaaccgcgt cggcgtcgtg ttgcgcattg ggaagcaccc cgaccgcgcg
     1921 gtagttcgaa ttgccgatca caaaggcgac ccgcttttct ccgggtttag cgggaactgc
     1981 cggcggcgcg gggtttgcgg aagtgccagc ggcgcttcaa aaaaaagcgg tgcgcttgag
     2041 ttcgtcgctg ggtgaacgtt acccccgccc ttgtgtccgg aaacaagatc ctaactcacg
     2101 cttcctttaa gggcggtagc gagcttgagg gcctgatccg atagtattgc ggggtcttcc
     2161 ttgacgctcg ctggcggctt gagcgggacg cccgccttgc gcggcatgac atggacatgg
     2221 agatggaaca cgacctgccc cccggccggc tcggagaact gctgcacggt gacgccgtct
     2281 gcttggaaga ccttcatgcc cgctcgggcg atcttctgga ccaccttcat cacatggacg
     2341 aagtcatccg gcgcgacatc gagaatgttg cgcgccggcg tcttggggat caccaacgtg
     2401 tgcccgggag cgcgcggcat gatgtcgaga aacgcgaaag cgccatcatc ctcgtagacc
     2461 ttgtggctgg gtagctcgcc gcgcaggatt tttgcaaata cgttggtggg atcgtagctc
     2521 gtcatcggtg gcctccgggt tggcggcgca atgtcggggg cacggaataa tcagtcaaga
     2581 cgggggtcga gcagggccga ttcacagcac tattttgtcg tcgtaattca aaatcccgca
     2641 tcctcgtcag ccaattcctg cttcgccaaa tgctcgccac ccaaacattt gcggaacggg
     2701 ctcgcctcgc gcaattcctg tccggcggcc tccacatagg cgcgctcgcg attgagatag
     2761 tcgtcgatcg cccgccggaa gccgggatct gcgatgtagt gtgccgaata agtcgtgttt
     2821 ggcagatagc cgcgcgcgag tttgtgctcg ccctgggcgc cggcctcgac gcgcccaagt
     2881 cggtgagcga tcgcatattc gatcgcctga tagtagcaaa tctcgaaatg caagaacgga
     2941 tgatgctcga ttgcgcccca gtggcgaccg aacaaagtgc cgtcgcccac gaagttgatc
     3001 gctccggcga tgaaacggcc cgcgcgcctt gccatgatca ggacggtctc gttcgccatg
     3061 gcctgcccga tcagagagaa gaattcgcgc gtgagatagg ggcgtcccca tttgcgcgag
     3121 ccggtttcca tgtagaacgc gaagaaagca ttccatgcgg cttcggtgag gtcggcgccc
     3181 gtgagccata ccacctctat accggcggtg agcgcgtcgc gtcgctcgcg cctgatggtc
     3241 ttgcgcttgc gcgacgacag cgccgccagg aaatcgtcga agctcccaaa gccacggttt
     3301 tcccagtgga attgctggtc ggtgcgcaac aggaagccgc attcgccgag cgcacgcgat
     3361 tccatctcgg tcatgaaggt gatgtgggcc gaggatgcgt tgcgcaattt tgtgagctcg
     3421 accagtcccc gggccaacgt aaccctggcg gtgtcgacat cggcgccagg tgccaccaag
     3481 aggcggcggc cggtcacggg cgtgaacggc accgccacct gaagctttgg gtagtaactg
     3541 ccgccagcgt gctcgtaggc ttccgcccaa ccgcggtcga atacgtattc gccgcgcgaa
     3601 tgggatttga gatagcaggg agcaaccccg atggcacacc cgtcggtagt ctcgacgaca
     3661 agatgctgcg gctgccagcc ggtgcgcgcc gtcgctgact tcgacgcttc gagggcggcg
     3721 aggaaggcat ggcgcgtgaa tggattggct ccggctccac ccgcgcaggc gtcccaggat
     3781 gccgccgcga tgtcgccgat ggcgggaagc acgcgaacgc gcaaggcctg accagttaag
     3841 gtttttttgg attgcgcggc cgttggggca tccgttgaag cgctcttgcg ggacatcctg
     3901 gttggcttag ccatcctgag ctgtgacaga ccacgacgcg ctcgaagttg gcgcggcggc
     3961 catagtgtat gcatctgtga ccgcggttca aacaccgcag ggtagcagcg cagcggcgtg
     4021 gttctatttt accgaaatcg gtgcaaaatg tgactatttt gcagcaattg cggaaaaaaa
     4081 gaggtgtaaa catgcagatt taggttgcgc cgcacaaatt acagtctaac ttcaccacat
     4141 tcttctcttt agaaatcgcc tcgttggaag gaaccatcat gaagcgtttg gctgttgtac
     4201 tatttggtgc tgcgggcgtg agcctgggat tagccactac ggtgctcgcg gctgaccttg
     4261 gccggccggc gatgccgacc aaggcgcctg ccatgatcgt cgccgacgac tgggcggggt
     4321 tctatattgg gggccatttg ggcggggctt gggcgaagag cggttattcc tacgacgacg
     4381 gcgccaccat agaggctttc agcttcagtc cgagctcaat catcggcggc gggcacctag
     4441 gggtgcaggg acaatggggc acctgggttc tcggcgtcga gggatcgttc gacggcaccg
     4501 acctttcgca aaccgcgatc ggcgtgaata ccacacagtc gctgaagata gatgatattg
     4561 ccaccgtgac gggacgtctt gggtatgcgc tgccgcagtg gctgttctat gtcaaaggcg
     4621 gctgggccgg cgttcacgag aaaaatagtt ccacgcaggt tggcgcgacg cacagcttta
     4681 cggactggaa tagcggctat acggtcggcg gcggcattga atacaagtgg acgcggaact
     4741 gggttctcgg cactgaattc aacttctaca acgccaaatt cgaccacaac ggactcgact
     4801 cgagcggcgt cgccgttcgt gttttcaaca gcaatgcgga catttactcg gtgctgttgc
     4861 gcgccagcta cctgttcaag taggcggtgc ggcacgctca tcgtatctta cgacaagctt
     4921 ctagatgccc cgggctcagg tccggggcat ttgctttgcc ctcatctcat cagttgcgtt
     4981 ccagcatggc gctgtcgatt tttaagcgat gaaggccggt gttcgcggcg gcggacatgt
     5041 tcgttcagaa ctctcaaagg cacggcgcga aaagactacg cccgtcggtc gccgccaaca
     5101 ccttatttgt cgcgatgtcg ataacatgca gcatgtagcc gaag
//
LOCUS       DATILV010000295         4574 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4412371, whole genome shotgun sequence.
ACCESSION   DATILV010000295 DATILV010000000
VERSION     DATILV010000295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4574
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4412371"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..264
                     /locus_tag="VLJ17_06780"
     CDS             <1..264
                     /locus_tag="VLJ17_06780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014891884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HSV22718.1"
                     /translation="LILSNQPGAQSWPMTAATFILIHKQPQDAAAAAEALKFFAWAYS
                     NGGKLAEDLDYVPMPAKVVATIQSTWTKEIKDPAGKSLYPASR"
     gene            476..1432
                     /gene="pstC"
                     /locus_tag="VLJ17_06785"
     CDS             476..1432
                     /gene="pstC"
                     /locus_tag="VLJ17_06785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015668927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HSV22719.1"
                     /translation="MASSVSRTRVLARLHVSDVVFRYLTLTAAILVLVILSGIIVALA
                     EGALPALRAFGFNFLIEERWNPVTEKFGALAPIYGTVVTSFIAMLIAVPLGLLIALFL
                     TELCPMWLRRPIGIAIELLAGIPSIIYGIWGLFVLAPFLQRTLQPTLIDWFENVPILS
                     ALFAGPPYGIGVLTASLILAIMVLPFVTSISRDVFEAVPPVLKEAAYGVGCTTWEVVR
                     YVVLPFARVGVIGGVMLGLGRALGETMAVTFVIGNAHKVSASILAPGTTISATIANEF
                     TEAVGDLYTSSLIALGLILFVITFVVLAAARFLLLRIEKRVG"
     gene            1460..2275
                     /gene="pstA"
                     /locus_tag="VLJ17_06790"
     CDS             1460..2275
                     /gene="pstA"
                     /locus_tag="VLJ17_06790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016921715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HSV22720.1"
                     /translation="MQNTMVIGLSIGATVLGLGWLVLILGSLVYHGFGGLSPEVFLEM
                     TPPPGADGGLLNPIIGSLMLTILAVAIGTPVGILAGTYMAEYGKFAKLTVVVRFINDI
                     LLSAPSIVVGLFVYEVLVAPIGHFSGWAGGVALSLIVIPVVLRTTEDMLSLVPKELRE
                     SASALGLPRVHVIRYVSYRAARAGIITGVLLAIARISGETAPLLFTALNNQFFSSNLN
                     APISSLPVVIFQFALSPYADWQKLAWIGALIITFAVLALSITARALSASEKSS"
     gene            2272..3111
                     /gene="pstB"
                     /locus_tag="VLJ17_06795"
     CDS             2272..3111
                     /gene="pstB"
                     /locus_tag="VLJ17_06795"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HSV22721.1"
                     /translation="MTSIASISDGAHPSAPTIVARPAGAIDNPVEKVLIRNLNFYYAD
                     NRALKSINVPLYDRKVTAFIGPSGCGKSTLLRVLNRIYSLYPHQRAEGEVLLDGWNIL
                     DPGQDLNLLRARVGMVFQKPTPFPMSIYENIAFGLRLFEKLGRGEVDERVQSALRRAA
                     IWDEVKDKLHANGLSLSGGQQQRLCIARTVALKPEVILLDEPCSALDPISTAKIEELI
                     DELKDDYTIAIVTHNMQQAARVSDFTAFMYLGELIEFDTTSKMFTTPGDRRTQDYITG
                     RFG"
     gene            3181..3903
                     /gene="phoU"
                     /locus_tag="VLJ17_06800"
     CDS             3181..3903
                     /gene="phoU"
                     /locus_tag="VLJ17_06800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0051049 - regulation of transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HSV22722.1"
                     /translation="MMMEHTIKSFDADLQELARMIAEMGGLAERQIGEALDALNRHDA
                     ALARSVVAADARIDAVQHEIEEKAILTIARRQPLAVDLRDIVSALRVSNDLERIGDLA
                     KNIAKRVEVVESELNLQKVMRGVGHMTELVLTQIKDVLDAYARRDVAKAVQVWRGDEE
                     VDAVNNSLFRELLTYMMEDPRNISACIHLLFCAKNIERIGDHATNIAETIYYMVEGRT
                     LTEERPKGDTTSTTNIPYRNER"
     gene            3929..>4574
                     /gene="phoB"
                     /locus_tag="VLJ17_06805"
     CDS             3929..>4574
                     /gene="phoB"
                     /locus_tag="VLJ17_06805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006796 - phosphate-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon transcriptional regulator
                     PhoB"
                     /protein_id="HSV22723.1"
                     /translation="MTARILIIEDEEPLTLLLRYNLEAEGYAVDSAVRGDEADLKLKE
                     NAPDLAVIDWMLPGLSGIELIRRLRARPETQALPIIMLTARGEETERVRGLATGADDY
                     IVKPFSVPELLARVRALLRRTKPERVAGVLEAGDIELDREKKRVARAGRDVPLGPTEF
                     RLLEFLMENPGRVFSREQLLDRVWGRDVYIDERTVDVHVGRLRKALNRGRAIDPI"
BASE COUNT          880 a         1334 c         1369 g          991 t
ORIGIN      
        1 ctgattctga gcaaccaacc gggcgcacaa tcgtggccaa tgacggcggc gacattcatc
       61 ttgatccata agcagccgca ggatgcggcg gccgccgctg aagcgctcaa atttttcgcc
      121 tgggcataca gcaatggcgg caagttggcg gaggacttgg actatgtccc gatgcctgcc
      181 aaggtcgtgg caacgatcca gagcacctgg accaaggaaa tcaaggatcc agccggcaaa
      241 tctctctatc cggcttcgcg ttgaagtcgc gtttgcattg acgcggaagg gcgctgctgg
      301 cgcctttccg gtccggcacc tcatgccttt atccacataa aacgcgaggt accgcttgtg
      361 aaatagtacg cgtgtcgatt gagttgctct cctgcagtcg agaccggaga gaattttgcg
      421 taagcccggg agtcaatccg tggtcgatgt agcactaccg agtggcgaca ctgccatagc
      481 gagcagcgtt tcgcgcacgc gcgtccttgc cagactgcat gtaagcgatg tcgtgttccg
      541 ctatctcacc ctcacggccg cgatcttggt actcgtgatc ctcagcggaa tcattgtcgc
      601 gttggccgaa ggcgcgttgc cggcgttgcg ggccttcggg tttaattttc taatcgaaga
      661 gcgatggaat ccggttaccg aaaagttcgg agccctcgct ccgatttacg gtaccgtggt
      721 gacgtcgttt atcgccatgc tgattgcggt accgcttggt ctgctgattg cgctatttct
      781 gaccgaattg tgcccgatgt ggctgcgccg gccgatcggc atcgcgatcg aactgctcgc
      841 cggtatcccc agcatcatct acggcatctg gggattgttc gtgctggcgc catttctgca
      901 gcgcaccctg caaccaacct tgatcgactg gttcgagaac gtcccgatac tttcggcttt
      961 gttcgcaggg ccgccctacg gcattggtgt tcttacggca agcttgatcc tcgccattat
     1021 ggtgctgccg ttcgtcactt cgatctcacg tgatgttttc gaggcggtgc cgccggtgtt
     1081 gaaggaggcc gcctatggag ttggctgcac aacctgggaa gtcgtgcgtt atgtcgtgct
     1141 tccctttgcg cgggtcggcg tcatcggcgg cgtgatgctg ggtctcggcc gcgcgctcgg
     1201 tgaaactatg gcggtgactt tcgtcatcgg caatgcgcac aaggtctcgg cgtcaatcct
     1261 ggcgcccggc accactattt ccgccaccat cgccaacgag ttcactgaag cagtgggcga
     1321 tctttacacg tcatcgttga ttgcgctcgg gctgatcctg ttcgtgatca catttgtcgt
     1381 gctggctgcc gcgcgtttcc tgctgttgcg gatcgaaaag cgcgtggggt gaggcatgga
     1441 tcgttatcgc cggcgccgta tgcaaaacac gatggtcatc gggctgtcga tcggtgccac
     1501 cgtgcttggg ctgggatggc tcgttttgat cctggggtcg cttgtctacc acggtttcgg
     1561 cggcctatca ccggaggtat tcctggaaat gacgccaccg cccggagctg acggtggcct
     1621 gctcaatccg attatcggca gtttgatgct gacaattctg gcggttgcga tcggaacccc
     1681 ggtcggcata ttggccggga cctacatggc ggaatatgga aaattcgcca agctgaccgt
     1741 ggtggtgcgc ttcatcaacg atatccttct gagcgcgcct tcgatcgttg tcggcctctt
     1801 cgtctatgaa gtcctggttg ctccaatcgg acacttttcc gggtgggccg gcggcgtggc
     1861 gctttccctc atcgtgatac ccgttgtgct gcgaacgacc gaggacatgc tgtcactggt
     1921 tccaaaggaa ttgcgcgagt cggcgagcgc gctcggcctg ccgcgcgtcc acgtgatccg
     1981 ctacgtctcc tatcgggcgg ctcgtgctgg cattataacg ggtgtgctgt tggcgatcgc
     2041 ccgcatcagc ggtgaaaccg ctccactgct gttcaccgcg ctcaataatc agtttttcag
     2101 tagcaacctc aacgcgccca tctccagcct tccggtcgtc atattccagt tcgccttgag
     2161 cccatacgcg gattggcaga agctcgcctg gatcggtgcg ttgatcatca cctttgcggt
     2221 gctcgcgttg agcatcacgg cgcgtgccct ctcagcatca gagaaatcgt catgacgtcg
     2281 attgccagca tcagcgacgg agctcatcct tccgctccga cgatcgttgc ccgccccgca
     2341 ggtgcgatcg acaatcccgt cgaaaaggtg ctcatccgta atttaaattt ctattatgcg
     2401 gataacaggg cgctcaagtc catcaatgtg cccctctacg atcgcaaggt tacggccttc
     2461 atcggtccat ccggttgcgg aaagtcgacg ctgctgcgcg tcctcaaccg catctatagc
     2521 ctttatcccc atcagcgggc ggagggcgag gtgctgcttg atggctggaa tatcctcgat
     2581 cccgggcagg atctcaatct tctgcgcgct cgcgtcggca tggtgttcca gaagccgacg
     2641 ccgtttccga tgtcgatcta cgagaacatc gcgttcgggc tgcgcctgtt cgagaagctg
     2701 gggcgcgggg aagtcgatga gcgcgttcaa tctgcgttgc gacgcgccgc aatctgggac
     2761 gaggtcaagg acaagctgca cgcgaacgga ttgagcctgt caggtggtca gcagcagcga
     2821 ttgtgcattg cccgcaccgt ggcgttgaaa cctgaagtca tcttgctgga cgagccgtgt
     2881 tcagcgctcg acccgatctc caccgctaag atcgaggaac tgattgatga gttgaaggac
     2941 gactacacga tcgcgatcgt cacccacaat atgcagcaag ccgcgcgcgt gtccgacttc
     3001 acggcattca tgtatcttgg cgagttgatc gaattcgaca ccaccagcaa gatgttcaca
     3061 acgccgggcg accggcgcac ccaggactac atcacgggcc gcttcggctg acccgcgaac
     3121 ggcgcgatca cgttatcaag ggatcggagc tgaccacgca ggagcgcaca ggaaatggcc
     3181 atcatgatgg agcatacaat caagtcgttt gatgccgacc ttcaagagtt ggcgcggatg
     3241 atcgccgaga tgggcggcct tgcggaacgt caaatcggcg aggcattgga tgcgctcaat
     3301 cggcacgacg cagcgcttgc ccgcagcgtc gtcgcggccg acgcgagaat cgacgccgtg
     3361 cagcacgaga tcgaagagaa agccattttg acgattgcgc ggcgtcagcc tctggcggtg
     3421 gatctacgcg acatcgttag tgcgctgcgg gtatccaacg atctcgaacg catcggcgac
     3481 cttgccaaga acatcgccaa gcgggtggag gttgtggaaa gcgagttgaa cctgcaaaag
     3541 gtaatgcgtg gcgttgggca catgaccgaa cttgtgttga ctcagatcaa ggacgtgctc
     3601 gacgcctatg cgaggcgcga cgttgccaag gcggtccagg tatggcgcgg cgacgaagag
     3661 gtcgatgcgg tgaacaattc actgttccgt gaactcctca cctacatgat ggaggatccg
     3721 cgcaacatca gcgcgtgcat ccatctgctg ttctgcgcca agaacatcga gcgcatcggt
     3781 gaccacgcga ccaacatcgc ggagaccatc tactacatgg tcgaaggccg tactctgact
     3841 gaagaacggc ctaagggtga caccacgagc accaccaata ttccttaccg gaatgaacga
     3901 taacccgcca tcgacgcgag aggaaatcat gacggctcgc atcttgatta ttgaagacga
     3961 ggaaccacta actctcctgc tgcgctataa tctcgaggcg gaaggttatg ccgtagattc
     4021 cgccgtccgc ggtgatgagg ccgatctcaa gctcaaagag aatgctcccg atcttgcggt
     4081 gatcgactgg atgctgcccg gcctgtcagg aatcgaattg atcaggcgac tacgcgcccg
     4141 gccagagacc caagccttgc ccatcatcat gctcacggcg cgcggcgaag agaccgagcg
     4201 cgtgcgcggg cttgcgaccg gcgccgatga ctacatcgtc aagccgtttt cggtgccgga
     4261 attgctggcg cgggtccgcg ccctgctgcg gcgcacaaag ccggagcgcg tcgccggcgt
     4321 gctggaggcc ggtgacatag agcttgaccg cgagaagaaa cgcgtagcgc gggccggccg
     4381 cgatgttcct ttgggaccga ctgaattccg cctgctcgaa ttcctgatgg agaatccggg
     4441 ccgcgttttt tcgcgtgagc aactgctcga tcgcgtctgg gggcgtgatg tttatatcga
     4501 cgagcgcacc gttgatgtcc acgtcggccg cctgcgcaag gcgctcaacc gcggccgcgc
     4561 catcgatccg atcc
//
LOCUS       DATILV010000296         2601 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3390682, whole genome shotgun sequence.
ACCESSION   DATILV010000296 DATILV010000000
VERSION     DATILV010000296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2601
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3390682"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(44..>2601)
                     /locus_tag="VLJ17_06810"
     CDS             complement(44..>2601)
                     /locus_tag="VLJ17_06810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSV22724.1"
                     /translation="LTPADVISAIQAQNVQAPVGRIGARPIGKDQQFQLNIQTLGRLT
                     TAEQFGNIVLRANPDGSLLRVHDIARVELGAQNEDVEGRFNDKPAVAIGLYLSPGANA
                     VTTASAVIATMDRLSRRFPPGLHYVVNYDTTTFVRATIQDVLLTLVIAFVLVVLVVFL
                     FLGTLRATIIPAIAVPVSVIGTFAVLLAIGYSVNTVSLLAMVLAIGILVDDAIVVVEN
                     VERVIEENPQWSPAEATKHAMTEITAPIIAITLVLLSVFVPVAFIAGISGQLFRQFAV
                     TISVAMLISALNALTLSPALCAIFLRHGSARRGPMGWILRRIENVRDGYAAIVRRLVR
                     VSVFGIVLIAISAAAIWAVALRTPTGFLPEEDQGAFFVNVQLPDGASVDRTGEVVSRV
                     TKLLMQMPQVDKVFAINGFSIIDNVNEPNTGFIVPLLKPFADRAKAADEAQALIGRVF
                     AEGQQIRSANVIAFNLPPIIGLSTTGGFEYELEGLEGQEPAEMNGVMQGLLAKANRDP
                     RLTRVFSTYTASNPSIFLDIDREKAQALGLGMNDVFTALQATLGGIFINNFNLFGRVW
                     QVNIEGQPADRREVSSLWQIYIRNKFGADVPLRSIADARIIVGPQVITRYNNYRAIPI
                     QGSPSPGTSSGTALDAMAAVSSATLPSGYTYEWTGTAYQEAAASGQTGAILGLAILFA
                     FLFLVGLYESWIIPLPVLLSVPIGVLGAFLGILIFHLSLDLYAQIGLVVLIAMAAKNG
                     ILIVEFAKDQREQGKDIKEAAVLGAQMRFRAVMMTSCAFVLGVYPLVVAHGAAQISRH
                     DVGTPVFTGMIAASAVGIFVIPLLYVTFQTLRERSGTLLRRSTARPDERSADA"
BASE COUNT          588 a          759 c          758 g          496 t
ORIGIN      
        1 aggattatga ccctccgctg tgccgcctgc atggtctcga ccgtcatgca tctgcagacc
       61 gctcatcggg tcgtgcagtc gatcgcctaa gcaatgtgcc gctgcgctcg cgcaaggtct
      121 ggaacgtgac gtacagcagc gggatgacga aaatgcctac tgcactggca gcgatcattc
      181 cggtgaaaac cggcgtgcca acatcgtgcc ggctgatctg ggcggcccca tgggcgacga
      241 ccagcggata aactccgaga acgaaagcac atgaggtcat catcacggct cgaaaccgca
      301 tttgcgcgcc gagcacagcg gcttccttga tgtccttacc ctgctcgcgt tggtccttag
      361 cgaactcgac gatcagaatc ccgttcttcg ccgccatcgc gattagcacc acaagtccaa
      421 tctgagcgta aagatcgagc gagagatgaa aaatcagaat accgagaaac gctcccagaa
      481 cgccgatcgg caccgacagc aataccggga gcgggatgat ccagctctcg taaaggccaa
      541 cgagaaatag aaaagcaaac aggattgcga gtcccaggat ggcgccagtc tggccagatg
      601 ccgcggcttc ctgatacgca gtacccgtcc actcgtaagt gtaaccggag ggcagtgttg
      661 cgcttgagac ggccgccatc gcgtcgaggg cggtgcccga tgaagttccc ggcgatgggc
      721 tgccctgtat cgggattgcg cgataattgt tgtaacgcgt gatgacttgc ggcccgacaa
      781 tgatgcgagc atccgcgatc gagcgaagcg gcacgtcggc gccgaacttg tttcggatat
      841 aaatctgcca cagcgacgaa acttcccggc ggtcggccgg ctgaccctct atgttgacct
      901 gccatacccg cccgaaaaga ttgaagttat tgatgaaaat gccacctaaa gtggcttgca
      961 atgcggtgaa cacatcattc ataccgagcc caagcgcctg cgctttttcg cggtctatgt
     1021 cgaggaatat cgacgggtta ctggcggtgt aggttgagaa gacgcgcgtg agccgcggat
     1081 ctctattggc cttcgcgagg agcccttgca tgaccccatt catctcggcg ggttcctgtc
     1141 cttccagtcc ttcgagctcg tactcgaacc cgccggtggt ggagagcccg atgatcggcg
     1201 gcagattgaa tgcgatcacg ttggcgctgc ggatctgctg tccttccgcg aaaacacggc
     1261 cgatcaaggc ctgcgcctca tcagccgctt tggcgcgatc ggcaaacggt ttaagcaacg
     1321 ggacgatgaa gcctgtgttc ggttcgttga cattatcgat gatcgaaaag ccattaatcg
     1381 cgaaaacttt atcgacctgc ggcatttgca tcagcagctt ggtcacccga ctgacgactt
     1441 cgcccgtgcg gtcaaccgaa gcgccatccg gcaattgcac attcacgaag aacgcgccct
     1501 ggtcctcttc tggcagaaaa ccagtcggtg tgcgaagtgc gaccgcccag atcgcagcag
     1561 cactgatcgc gattagcaca atgccgaaga ctgacacccg tactaggcgt cgcacgatcg
     1621 ccgcatagcc gtcacggacg ttctcgatgc gccgcaatat ccaacccatc ggaccacgcc
     1681 gcgcgctacc gtggcgcaga aaaatcgcac agagcgccgg cgataaggtt aaagcgttca
     1741 atgccgagat cagcatcgcg acgctgatcg tcaccgcgaa ttggcggaat aactgccctg
     1801 agatcccggc gatgaatgcg acgggcacaa acacggagag cagcacgagc gtgatggcaa
     1861 taatcggtgc cgttatctca gtcatcgcgt gttttgtcgc ttcggcgggg gaccattgag
     1921 gattttcctc aatcacccgc tcgacgttct cgaccacgac gatggcatca tcgacgagaa
     1981 tgccgattgc cagcaccatc gcgagcagcg acaccgtgtt gaccgaatac ccgatcgcca
     2041 gcagcactgc gaaagtgcca atcacgctaa caggtaccgc gatcgctgga atgatggttg
     2101 cgcgtagggt accgagaaat aagaagacga cgagtacgac caggacgaat gcaatcacta
     2161 gcgtgagcag cacatcctgg atcgtcgcgc gcacgaaggt cgtcgtatca taattgacga
     2221 cgtagtgaag accgggcggg aaccgccgac tgaggcggtc catggtggcg ataacggccg
     2281 aggcggtggt caccgcgttt gcgccgggcg acagatagag gccaatcgct acagcgggct
     2341 tgtcgttgaa gcggccttcg acatcctcat tctgagcccc aagctctacc cgcgctatgt
     2401 catgcacacg cagcagggag ccgtcgggat tcgcgcgaag gacgatattg ccgaactgct
     2461 ccgcggtcgt caggcgacct agcgtttgaa tgttcagttg aaactgctgg tctttgccga
     2521 tcggccgtgc cccgatgcgg ccaacgggcg cctgaacatt ttgggcctgg atcgcggaaa
     2581 tgacgtcggc aggcgtcagt t
//
LOCUS       DATILV010000297         2170 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3138284, whole genome shotgun sequence.
ACCESSION   DATILV010000297 DATILV010000000
VERSION     DATILV010000297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2170
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3138284"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1429)
                     /locus_tag="VLJ17_06815"
     CDS             complement(<1..1429)
                     /locus_tag="VLJ17_06815"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSV22725.1"
                     /translation="MTIQIRNTDIGRRGFMIGAAGFTFAVAARLPFEPAEAAGKDVAL
                     SPWVTISTDDTVAIMSPAAEMGQGSLTSLPLILAEELDADWSKVRIVVAPPNDELYKN
                     PAFGYMYTAGSNAVTAYFKDLRRFGAQVRKVLLANAAKHWNVPVEELTTEPNVVIHEK
                     SGRRLSYGEIAAFAEVPARAPEVAESELKKTNQFRLIGKDVMRVELPQKVNGTAQYSI
                     DVHVPGMLYGAILRSPVEGGGPDKVDDAKAKSIAGVMRIVPLPYGVGVIAETPWAAFD
                     AKEALKVTWTRTGKAWGFNSEKALVDFAAAARDISRPAKLWAKEGDAPAALQTAAMIV
                     EGEYRNDLVYHAQMEPLNAVASVSPAGDACELWCGVQSKTIAVTVAASALKIAPDKIT
                     YHDMLMGGGFGRRGHRDEEYVHDAVVLSNVVKKPVKVMWTREDDVRNGRFNPLSVHYL
                     RAGFDASGKLIAYHHRKATDEVTAFQ"
     gene            complement(1432..1887)
                     /locus_tag="VLJ17_06820"
     CDS             complement(1432..1887)
                     /locus_tag="VLJ17_06820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HSV22726.1"
                     /translation="MAFDFKVNGKAAHSDAPPHTPLLWVIREELKLTGTKFGCGTGLC
                     GACMVHIDGKRAFSCQTQVSQVAGKAVTTIEGLSADSSHPVQKAWLAERVPQCGYCQS
                     GQIMSAADLLAHNPKPNRAQIIEHMSTNICRCGSYQRIVRAVERAAKEA"
BASE COUNT          390 a          696 c          663 g          421 t
ORIGIN      
        1 cctggaacgc cgtcacctcg tcggtggcct tgcgatgatg ataggcgatg agcttgcccg
       61 acgcatcgaa gccggcacgc aagtagtgca ccgacagcgg attgaagcgt ccgttgcgaa
      121 cgtcgtcctc gcgcgtccac attaccttga cgggcttctt cacgacattc gacagtacga
      181 cggcatcatg cacgtactct tcgtcgcggt gaccacgccg cccgaagccg ccgcccatga
      241 gcatgtcgtg atacgtgatc ttgtccggtg caattttgag cgcactggcc gcgaccgtca
      301 cggcgatggt cttcgattgc acgccgcacc acagctcgca agcgtcgcca gcgggagata
      361 ccgaggcgac cgcgttaagc ggctccatct gggcgtgata gacgagatcg ttgcgatatt
      421 cgccctcgac gatcatcgcg gcagtctgca gggcggcagg cgcgtcgccc tccttggccc
      481 acaatttggc aggccgcgat atatcgcgcg ccgccgccgc gaagtcgacc agcgccttct
      541 cgctgttgaa gccccacgcc ttgccggtgc gggtccaagt gaccttaagg gcctccttgg
      601 catcgaacgc cgcccacggg gtttcggcaa tcaccccgac cccatagggc agcggcacga
      661 tccgcatcac gccggcgatc gactttgcct tcgcgtcgtc gaccttgtcc ggccccccac
      721 cttcgacggg cgagcgcaga attgcgccgt agagcatacc gggcacatgc acgtcgatgc
      781 tgtattgcgc cgtgccattc accttttgcg gtagctcgac gcgcattacg tccttgccga
      841 tgaggcggaa ctgatttgtt ttctttagct cactttccgc aacctccggc gccctggcgg
      901 ggacttccgc aaacgcggca atctcgccat aggacaggcg gcgccccgac ttctcatgaa
      961 tgacaacgtt cggttcggtg gtcagctctt ccaccggaac gttccagtgc ttggcggcat
     1021 tcgccagcaa cactttgcgc acctgcgcac cgaaccgacg cagatccttg aaataggcgg
     1081 tcacggcatt gctgccggcc gtgtacatgt agccgaacgc cggattcttg tagagttcgt
     1141 cgttcggcgg cgccaccacg atgcgcacct tcgaccaatc ggcgtccagc tcctcggcca
     1201 atatcagagg cagcgaggtc agggacccct gccccatctc ggccgccgga gacatgatcg
     1261 caaccgtatc gtcggtcgag atcgtcaccc aggggctcag ggccacgtcc ttgccggccg
     1321 cttctgccgg ctcaaatggc agacgagccg ccaccgcgaa cgtaaacccg gctgcgccga
     1381 tcatgaaacc gcggcggccg atgtccgtat tgcgaatttg gatggtcatg gtcaggcctc
     1441 cttcgcggcg cgctcgacgg cgcggacaat gcgctgatag gagccacagc ggcagatgtt
     1501 ggtgctcatg tgctcgatga tttgggcgcg gttaggcttg gggttgtgcg ccagcaggtc
     1561 ggcggcgctc atgatctggc cggactggca gtagccgcat tgcggcaccc gctcagcgag
     1621 ccaggccttc tgcaccggat gcgaggaatc cgcggacagc ccctcgatgg tggttacggc
     1681 cttgccggca acttgcgaga cctgggtctg gcacgagaag gcgcgtttac cgtcgatgtg
     1741 taccatgcag gcgccgcaca gcccggtacc gcatccgaac ttggtgccgg tcagcttgag
     1801 ttcttcgcgg atcacccaca gtagcggcgt atggggcggt gcatccgagt gcgccgcctt
     1861 gccattgacc ttgaaatcga atgccatggt ttcctccggt ggtttcgatt gaggattttt
     1921 cgcgactgag gcgccattct agttctttcc cgcggtcgtg tggagctaca aaaccgggga
     1981 gcgcagcgct attctggcgg caaaagaaac gagggatcct cgatcaagga tgtcatcgtc
     2041 cgcgaaagcg gacgatccgc cactgatttc gccggatttt tcgaacaccg gggttagtgg
     2101 ggcgcccgac ggagccgggc gactgcggac ccgagaagga gtaaccaaat gcccaagccc
     2161 aacggacacg
//
LOCUS       DATILV010000298         1756 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1859947, whole genome shotgun sequence.
ACCESSION   DATILV010000298 DATILV010000000
VERSION     DATILV010000298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1756
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1859947"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..225
                     /locus_tag="VLJ17_06825"
     CDS             <1..225
                     /locus_tag="VLJ17_06825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011331447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HSV22727.1"
                     /translation="REILLPIRAICEIASVTLETHDRGIAIAERYGFSFYDAMIVASA
                     LGAGCKTLYSEDLQHGQVIARQLRIRNPFT"
     gene            complement(236..1189)
                     /locus_tag="VLJ17_06830"
     CDS             complement(236..1189)
                     /locus_tag="VLJ17_06830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22728.1"
                     /translation="MTRLVEAVYGDTYYPRDLYTPEQIVQLNATEKLVSIVALDSARQ
                     VVGHYALERPNLEAVAEASDAIVCEECRHHHLLEEMRPLLREEAKRLGLTGLVGYPVT
                     NHLFSQKAEEHFGSHPCGVALGLWPRSFHNMPEPLPQRMSFVIYFDYVCPATHVVHVA
                     APHREIISRIYRQYGISLESCGTEPEAEKGDIILEHEPEVQTGTIRVRRAGADTAAAV
                     RQARDQLCDGNGVKAVTLELPLAQPESADLCRAAEEDGFFFSGLGPAFAADGDALLMQ
                     FIVEDLDLSLIQIENPFAKDLLVYAGRERERVQNARRRQRP"
     gene            complement(1365..>1756)
                     /locus_tag="VLJ17_06835"
     CDS             complement(1365..>1756)
                     /locus_tag="VLJ17_06835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22729.1"
                     /translation="KTSFLHVEGRVGDTSVSDLLSNAVDRAYKTGDQQELREFCYNSK
                     LTRTEGKLRYQDAPEPFSSWLAFTRSALKLESCSSLALDGRSYLQRVLHAGEIHTVEW
                     SNPREISWPKQTKMVNTYFDCLTAAGL"
BASE COUNT          390 a          482 c          487 g          397 t
ORIGIN      
        1 agagagatcc tccttcccat ccgcgcgata tgtgagatcg catcagtaac cctggagacc
       61 catgaccgtg gtatcgctat agccgagcgg tacgggtttt cattttatga tgcgatgatt
      121 gtcgcttcgg cactgggcgc cggatgcaag actctatatt ccgaagatct tcagcatggg
      181 caggtgatag cgcgtcaatt gagaattcgc aatccgttta catagagcat taacctcaag
      241 gccgctggcg ccggcgagca ttctggaccc gctcacgctc gcgacccgca taaacgagca
      301 aatccttggc aaagggattt tcgatctgga ttagagacag gtcgaggtcc tctacaataa
      361 actgcatcag cagagcgtcg ccgtcggcgg cgaacgccgg tccgagcccg ctgaagaaga
      421 atccgtcttc ttcggcggcg cggcaaagat cggcgctttc cggttgggcc aggggtaatt
      481 ctaaagtaac agcctttacg ccgttgccgt cacagagctg gtcacgggcc tggcggacgg
      541 cggcggccgt atcggctccc gcccggcgaa cccgaatagt tccggtctga acttccggtt
      601 cgtgctcaag gatgatatcg cctttctccg cttcgggctc ggtgccgcac gactcaagag
      661 agattccgta ctggcgatag atgcgtgaga ttatctcgcg gtggggtgcg gccacatgaa
      721 cgacatgcgt cgcagggcac acatagtcga aatagattac aaagctcatg cgctggggca
      781 gcggctcggg catgttgtgg aaggatcgcg gccacaatcc cagtgccacc ccgcatgggt
      841 gtgaaccgaa gtgctcttcg gccttctgag aaaaaagatg attggtcacc ggatagccga
      901 ccagacctgt caagccaaga cgctttgctt cttcgcggag cagaggccgc atctcctcca
      961 aaaggtgatg atgccggcat tcctcgcaga cgatggcgtc gctcgcctcc gcgaccgcct
     1021 ccagattggg ccgctccaga gcataatgac cgacaacctg acgcgccgaa tccagtgcaa
     1081 cgatggaaac cagcttttcg gtcgcgttca actgaacaat ctgctcaggt gtatacaggt
     1141 cacggggata ataggtatcg ccgtacacgg cttcgaccag ccgggtcacg ccggccgcat
     1201 cgtcggaacg aaaacgccgg atgttgaatt cgcccacgtt ggattcggaa gaagatgttt
     1261 cagtcacggg cggcgtcccc tgcttcgatt ttcggttggt tgtatcagcc attggtctta
     1321 ttacgccaac ctcacggttc gaccctctgc gtttttattt ctggtcaaag acctgctgcc
     1381 gttagacagt cgaaataggt attaaccatt ttcgtttgtt tgggccacga gatttccctt
     1441 ggattcgacc attcaacagt gtggatctca ccagcgtgca gcactctttg caaatacgaa
     1501 cgtccatcga gagctagaga cgaacaagac tccagtttga gcgcactcct tgtaaaagcc
     1561 agccatgagc taaatggctc tggtgcgtcc tgataacgca attttccttc tgtgcgagtt
     1621 agtttagaat tgtaacaaaa ctcacgaagt tcttgttgat cgccggtttt gtaggcgcga
     1681 tcgacggcgt tggacaatag atccgagaca gatgtgtcgc cgaccctacc ctcgacgtgg
     1741 aggaacgacg tcttga
//
LOCUS       DATILV010000299         5334 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4671080, whole genome shotgun sequence.
ACCESSION   DATILV010000299 DATILV010000000
VERSION     DATILV010000299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5334
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4671080"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1162)
                     /locus_tag="VLJ17_06840"
     CDS             complement(<1..1162)
                     /locus_tag="VLJ17_06840"
                     /EC_number="4.2.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-succinylhomoserine sulfhydrylase"
                     /protein_id="HSV22730.1"
                     /translation="MSVSRDLHPETRLVHAGALRSQFGETSEALFLTQGFVYDSAEQC
                     EARFTGADPGYQYSRFSNPTVHMLETRMAAFESAEAARATATGMAAVHNAVIGQVKAG
                     DHVVAAKALFGSCRWVVEEFLPRFGVASTLVNGLDLDEWRRAVQPNTKVFFLESPTNP
                     TLDVLDITAIAAIAHEAGARLVVDNVFATPIYQSPFALGADCVVYSATKHIDGQGRCL
                     GGIILGSEKFIQDNIHNLLRQTGPAMSPFNAWVLLKGLETLPLRVARQTQTAATIADL
                     LFCHPKITRLIYPGRADHPQAATVKRQMRGGSNLIAFEVAGDKPGAFRFLNALKLVRI
                     TNNLGDAKSLITHPATTTHQRLTPAARAELGISDGLVRLSAGLEHPDDIVADL"
     regulatory      complement(1218..1296)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00521"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="SAM riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00521"
     gene            1508..2614
                     /locus_tag="VLJ17_06845"
     CDS             1508..2614
                     /locus_tag="VLJ17_06845"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008829 - dCTP deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0009394 - 2'-deoxyribonucleotide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2'-deoxycytidine 5'-triphosphate deaminase"
                     /protein_id="HSV22731.1"
                     /translation="MSLNLRADDKGILPDRIIAALVRSGAVIPARALDDDQIQPASID
                     LRLGEVAYRVRASFLPGPDSTVGERIDELKLHEIPLGDGAVLETACVYIVPLIESLSL
                     PPEIAASANPKSSTGRLDVFTRVIADQTRGFDQINAGYHGPLYAEISPRTFPVLVREG
                     SRLSQIRFRHGQVVVTREALAALHRHERLVDAEAPDLSDGVPVGVDLVGFGVDKFIGY
                     RAKRHTGLIDVDRRASYDVTEFWEPIRARRDRSLILDPGEFYILASKEAVQVPPDYAA
                     EMVPFDPLVGEFRVHYAGFFDPGFGYAGAGGRGSRAVLEVRSREVPFIIEHGQIVGRL
                     VYEQMLARPDALYGQSIGSNYQAQSLKLSKHFRA"
     gene            2712..3668
                     /locus_tag="VLJ17_06850"
     CDS             2712..3668
                     /locus_tag="VLJ17_06850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008963057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2167 domain-containing protein"
                     /protein_id="HSV22732.1"
                     /translation="MRKSRIVFMSAIAAVVMATLALPILARAQAPAAQSEEARDAELK
                     AAWQAGEEAGTKGPADITLIDQASLKLAADYFFIPKVEGMRIMRALGNTIYEPRFVGL
                     IVGTRRNDQWIVVANYTKEGYIKDDDAKDWNADELLQNLKDGTAESNKDRAARGFPEL
                     EVLGWVEKPAYDATTHRLVWSLLSKQRGQPDSAEKGINYNTYALGRDGYFSLNLLTSS
                     SRVDTDKAAAHELLAALSYNPGKSYEDFNASTDHIAEYGIAALIGGVVAKKLGLFALI
                     GVFIAKFAKVIGVAALALGGGIWNFFRRKSKNAPANNASPSA"
     gene            3684..4409
                     /locus_tag="VLJ17_06855"
     CDS             3684..4409
                     /locus_tag="VLJ17_06855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HSV22733.1"
                     /translation="MNSLLLLLLSSLKWGKLATTGGTMLLSLAVYATIWGWPYAAGFI
                     ALIFAHEMGHFVAARRCGLNVGAPTFIPFVGAWIELKDQPVDVRTEAYVAIAGPLVGT
                     VAAVAVYLSGRWTDSMVLVAIAYAGLFLNLLNLLPISPLDGGRITAIISPRIWLIGAP
                     MMLALLLYRPSPVLAIIAIMAFPQLIKAWKYDPKAPENRAYYGVPLQAKLEYGGLYLA
                     LTAYLGIMTFEVHEMLGGIGRPV"
     gene            4514..4759
                     /locus_tag="VLJ17_06860"
     CDS             4514..4759
                     /locus_tag="VLJ17_06860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019173848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008219 - cell death [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system
                     prevent-host-death family antitoxin"
                     /protein_id="HSV22734.1"
                     /translation="MDKTISAADANRNFSKLLREVREGHSYVVTSHGRPVAKIIPANV
                     QAESEQRGRAALLARLRSEPVIDIGPWRRDELYEDAP"
     gene            4756..5205
                     /locus_tag="VLJ17_06865"
     CDS             4756..5205
                     /locus_tag="VLJ17_06865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013896038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HSV22735.1"
                     /translation="MIVALDTNILAYAEGVNGPSMKELALGLVQKLPQGAAVLPIQTL
                     GELFNVLVRKAGRAPANARAAILSWRDSFPLIETSSATMLAAADLATDHRFGIWDAVI
                     LCAAAAADCRLLLSEDLHDGFTWRGVTIVNPFAPTKHALLDELLKDT"
BASE COUNT         1051 a         1614 c         1623 g         1046 t
ORIGIN      
        1 tcagatcggc cacaatatcg tcagggtgct cgagcccggc tgagagccgc accagcccat
       61 cgctgatgcc gagttctgcg cgtgccgccg gcgtcaagcg ctgatgcgtc gtggtcgccg
      121 gatgcgtgat caggctcttg gcgtcgccaa gattgttggt gatgcgaacg agtttcaggg
      181 cgttgagaaa acggaacgcg cctggcttgt cgcccgccac ctcgaaagca atcaagttgg
      241 acccaccacg catctgtctc ttgactgtcg ccgcctgggg gtggtccgcc cgccccggat
      301 agatgagtcg cgtgatcttg ggatggcaga aaagcaggtc cgcgattgtg gcggcggtct
      361 gggtctgccg cgccacccgt aacggcagcg tctccagccc cttgagcagc acccaggcat
      421 tgaacggcga catcgccgga ccggtctggc gcagcagatt gtggatgttg tcctgaatga
      481 acttctccga tcccaggatg atgccgccga ggcaacggcc ctggccatcg atgtgcttgg
      541 tggcggaata gacgacgcag tcggcaccga gcgcgaacgg cgattggtag atgggcgtcg
      601 cgaacacgtt atccaccacg agccgcgccc cggcctcgtg ggcgatggcc gcaatggcgg
      661 tgatatcgag cacgtcgagc gtcggattgg tcggactttc gaggaagaac accttggtgt
      721 tcggctgtac ggcgcggcgc cattcgtcga gatcgagccc gttgacgagc gttgaggcga
      781 cgccgaaccg cggcaggaat tcctctacta cccaacggca cgatccgaac agcgccttgg
      841 cggcgaccac gtgatcgccc gccttcactt ggccaatgac ggcgttgtgg acggccgcca
      901 tcccggtcgc ggtggcgcgc gccgcctcgg cgctctcgaa cgccgccatg cgggtttcga
      961 gcatgtgcac ggtcggattc gaaaaccggg aatactggta accggggtcg gcgccggtga
     1021 agcgggcctc acactgctcg gcactgtcgt agacaaagcc ctgggtgaga aagagagcct
     1081 ccgaagtttc gccaaactgc gagcgcaggg cgccggcatg gacaagacgc gtttcgggat
     1141 gcaggtcgcg agacacggac atctgggcct cctttggcca ataaaaaccc ggccgaggga
     1201 acattcccaa gggccgggca caaacgtccc cggcctttta gcgatttatt ttacgtggct
     1261 gcaagccggc cggctcaaat gaccacggga caacgaagct cataggcgcc ccaagccttc
     1321 ccgtcaagcc ggccatcgga taaatcagac cagcccgcat ggagccaccg ggtccggcct
     1381 tcggccggcc cgatgataaa ctcgacgtca tgcgggatcg ccgtcccggg atttcgccaa
     1441 agcgcgttga cgagcgttac cacgcttgag gctccatcca gggtctgcga aaccagggac
     1501 gccacccgtg tcgctgaatt tgcgcgccga cgacaagggc atcttgcccg accgcatcat
     1561 cgcagcactt gtccggagcg gcgccgtcat cccggcccgt gcacttgacg acgaccagat
     1621 ccagccggcc agcatcgact tgcgcctcgg cgaggtcgcc taccgggtgc gagcgagctt
     1681 tttgccggga cctgactcta ctgtcgggga acgcatagac gaattgaagc tccatgaaat
     1741 cccgctcggc gacggcgctg tactggagac tgcctgcgtc tatatcgtgc cgctgataga
     1801 aagcttgtcg ttaccgcccg agatcgctgc atccgccaac ccgaagagct caaccggccg
     1861 gctcgacgtg ttcacgcggg tgatcgccga ccaaacccgc ggtttcgacc agatcaatgc
     1921 cggctaccac ggtccgctct atgccgaaat cagcccgcgc acgttccccg tgctagtgcg
     1981 tgaagggtcg cggttgtcgc agattaggtt tcgccatggc caggtggtgg tgaccagaga
     2041 ggcgctcgcg gcgctgcatc ggcacgagcg cctcgtcgat gccgaagctc ccgacctctc
     2101 cgatggcgtc ccggtcggcg tcgatcttgt cggtttcggt gtcgacaaat tcatcggcta
     2161 ccgcgccaag cgtcataccg gtctcatcga tgtcgaccgc cgcgccagct atgacgtcac
     2221 agaattctgg gagccgatcc gagcaaggcg tgatcgtagc ctgattcttg atcccggcga
     2281 gttttacatc ctggcctcca aagaagccgt ccaggtgccg ccggactacg cggccgaaat
     2341 ggtgccgttt gatcctctgg ttggcgaatt tcgcgtccat tacgcgggct tcttcgatcc
     2401 cggcttcggc tatgcgggcg cgggcgggcg cggctcccgc gcggtactgg aggtacgttc
     2461 ccgcgaggtg ccattcatta tcgaacatgg ccagatcgtc ggccgcctgg tttacgaaca
     2521 aatgctggcc cggcctgatg cgctttatgg ccagagcatc ggctcaaatt atcaggcgca
     2581 gagtttgaag ctgtcgaagc actttcgcgc ctgaagaaag ttggaaaatc gctacattcg
     2641 agcccatcga cacgcggccg cccaatgcct gggacatata tctgggacac caagtcttga
     2701 ggagatcagc gatgcggaaa tctagaattg tgttcatgag cgcgatcgcc gccgtagtaa
     2761 tggccaccct cgcattgccg atcttggcgc gggcgcaggc ccccgccgcg cagagcgaag
     2821 aggcacggga cgccgagttg aaagccgcct ggcaggccgg cgaggaggcc ggaaccaagg
     2881 ggccagcaga tatcacactg atcgatcagg catcgttgaa gcttgcggcc gactactttt
     2941 ttatacccaa ggtcgaaggc atgcggatca tgcgcgctct cggcaacacc atctacgagc
     3001 cgcgattcgt aggcctgatt gtcgggacga ggcggaacga tcaatggatc gtagtcgcga
     3061 actacaccaa ggaaggctat atcaaggacg acgatgccaa agattggaac gccgacgaac
     3121 ttttgcagaa cctcaaagac ggcaccgccg aatcgaacaa ggatcgtgcc gcgcgcggct
     3181 tcccggaatt ggaggtgctc ggttgggtgg agaaaccggc ttacgatgcc acaacccatc
     3241 gcctcgtatg gtcgctgctt tccaagcaaa ggggacagcc agattccgcc gagaagggga
     3301 tcaactacaa tacctatgcc ctcggccgcg acggatactt cagcctgaac ctgctcacga
     3361 gttcgagccg agtcgacacc gacaaggcgg cagcacacga gctattggct gccctctcgt
     3421 ataaccccgg caaaagctat gaagacttca acgcctcgac cgaccacatc gcggaatacg
     3481 gcatcgcggc cctgatcggc ggcgtagtgg ctaaaaaact tggcctgttt gcgttgatcg
     3541 gcgttttcat agcgaaattt gccaaggtca tcggcgtcgc agccctcgca ctcggaggcg
     3601 gaatatggaa tttctttcgc cgcaaatcca agaacgcccc tgcgaacaat gcctccccga
     3661 gcgcctagtc ccacagccct cacgtgaact ccctcctgct gctgctgctg tcgagtctca
     3721 agtggggcaa actcgccacc accggcggca ccatgttgct gtcgctcgcc gtctacgcca
     3781 cgatctgggg atggccctat gcggcggggt tcatcgcgct catcttcgcg cacgagatgg
     3841 ggcacttcgt ggcggcccgg cggtgcgggc tcaacgtcgg ggcgcctacc tttattcctt
     3901 ttgtcggcgc ctggatcgaa ttgaaggacc agcccgtaga tgtccggacc gaagcctatg
     3961 ttgccatagc gggtcctctg gtgggcacgg tcgcggctgt tgcggtctac ctttcgggac
     4021 ggtggacaga cagcatggtg ctggtggcga ttgcatatgc agggctattt ctcaacctgc
     4081 tcaatctctt gccgatctcg ccgctcgacg gcgggcggat tactgccatc atcagcccgc
     4141 gtatctggtt gatcggtgcc ccaatgatgc tcgccttgct gctttatcgg cccagtccgg
     4201 tcctcgcaat catcgccatc atggcgttcc cgcaactcat caaggcgtgg aaatacgacc
     4261 ccaaagctcc cgaaaaccgc gcttattatg gcgttccatt gcaagccaag cttgagtatg
     4321 gcggtcttta cttggcgttg accgcgtatc tcggcatcat gaccttcgag gtgcacgaaa
     4381 tgctaggcgg gatcgggcgc ccggtgtgag ccgcctgccg gcgtaacgag gagtagatcg
     4441 tggcgtgaca aagttgtaac gtgttgacct cgtcgatttt gtagttatta taactacttt
     4501 cgatggggcc gccatggaca agaccatttc ggcagctgac gcgaatcgca atttctccaa
     4561 gctcctccga gaggtgcgtg aagggcatag ctacgtcgtc acgagccacg gaaggccggt
     4621 ggcgaagatc atacccgcaa acgtgcaagc ggaatcggag caacgcggac gagccgctct
     4681 tctggcgagg ctgcgttctg agcccgtgat cgacatcggt ccttggcgta gggatgaatt
     4741 gtatgaggat gcgccgtgat cgtggcgctg gacacgaata ttctggctta tgcggagggc
     4801 gtaaacggtc cctcgatgaa agaactggcc ctcggccttg tgcaaaagtt gccccaaggc
     4861 gcggccgtgc tgccgataca aacgcttggt gaactgttca acgtgctggt gagaaaggcc
     4921 gggcgcgctc cggcaaatgc acgcgccgcg attttgagct ggcgagacag ttttccgctg
     4981 attgaaacct cgtccgccac aatgcttgcg gccgccgatc tcgcaaccga tcatcgattt
     5041 ggaatctggg acgcagtcat tctctgcgct gctgcggcgg cggattgtcg gttacttctc
     5101 tccgaggact tgcacgacgg cttcacgtgg agaggcgtta caatcgtcaa cccgtttgcg
     5161 ccaaccaaac atgccctgct tgacgagttg ctcaaagata cctagagaat tttttggcca
     5221 tctcgtcgaa cgatgtcacg cttttcgccc cagcttgccg caagacattc aggaagcgga
     5281 tcggggcgtg acagttctgc tattcaaccc ggcgcaaatt cgagtgcggc gtgg
//
LOCUS       DATILV010000300         4487 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1092836, whole genome shotgun sequence.
ACCESSION   DATILV010000300 DATILV010000000
VERSION     DATILV010000300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4487)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4487)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4487
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1092836"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1453)
                     /locus_tag="VLJ17_06870"
     CDS             complement(<1..1453)
                     /locus_tag="VLJ17_06870"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HSV22736.1"
                     /translation="MLPLSSPRLSSLRLSCAFAARIAGTAIAVLSSAAFAASTWAADP
                     TILTGTVTSPAGEKMGGVTVSAKAVGATITTTVFTDEAGAYYFPALAPGKYRVWAQAL
                     GYETANSEAELKTGARADFALKKIEDTERLIRQLPGDLILAGLPEQTADDMRMKRIVH
                     NNCTSCHTPSYFLQHRFDEAGWHAIIEAMKSINVYGVYRPNQHNPVLDFHQDALAKYL
                     AKTRGPNGGAFKITSRPRPSGEAARALIREYDVPLNPDQQLPSSTPPNNGSDWTKATT
                     TRAGSLPHDAAPDLDGNLWFAAVAPNKTMSVGRIDGKTGTLKPFRIDAANGNAANVHG
                     LIRDGEGTIWFNAWMPKGGLAKVDPKTEKVSIYMPPEGMSHIDGPVTLDYDSKGGIWA
                     GTNDGALRFDPVAEKFAEFKSVNPRGPNGAIGQTYGIVGDKDGNGYWSQMAFDTIVKA
                     NLATGETTELKLPPVKDEMARATADDDKFYATYG"
     gene            complement(1490..1819)
                     /locus_tag="VLJ17_06875"
     CDS             complement(1490..1819)
                     /locus_tag="VLJ17_06875"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSV22737.1"
                     /translation="MLAAGIHGAAAQPFPASDTLTPQQLLGRNLFNQSCMVCHVKLQI
                     TSPAKYGPDLSKNALGGQEAVMRDVISNGTPNMPGFKYHFEPEQIDAIVSYVKTLPAP
                     PSSNLPR"
     gene            2215..2943
                     /locus_tag="VLJ17_06880"
     CDS             2215..2943
                     /locus_tag="VLJ17_06880"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSV22738.1"
                     /translation="MTGGSSGIGFAAADAFARQGSRVVIASRREAAAKIALKQLSTAG
                     DVQWRPVDAADGKSVARLIEATMALHGRLDYAFNNGGSGGRLARVASMPEDTWRKTID
                     GYLTSVFLCMSAEIAAMKSSGTGVIVNNASVDGLRGYPFPGGAAYSAAKHGVVGLTRS
                     AALEHAVRGPRICAICPGWINTPPVASWMKRDRNVAEAIIRQTPRGKIGSPEEVAAAV
                     LWLCSEVSSFAVGTVLAIDGGYTA"
     gene            complement(3049..3201)
                     /locus_tag="VLJ17_06885"
     CDS             complement(3049..3201)
                     /locus_tag="VLJ17_06885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22739.1"
                     /translation="MPRRGIIVRKTIDVLIGTWCIENRRPQLHNDRDFHPMARRLGLL
                     EVRLTA"
     gene            complement(3516..>4487)
                     /locus_tag="VLJ17_06890"
     CDS             complement(3516..>4487)
                     /locus_tag="VLJ17_06890"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HSV22740.1"
                     /translation="FSFLYFDLDNFKDANDTFGHSFGDELLRQVADRLRATVPQSDLV
                     ARFGGDEFAVLQPNVPDSEPADMLAQQIAKALAEPYKINDSVVHVTASIGIARHTPDL
                     ADADAMMMQADLALYRAKQEGRGCCRLHSVELGQQVRERITIAEELRSAIARGELELN
                     YQPQVELLTSRIIGLEALLRWRHPLRGMVSPALFVPIAERSGNILELGRWAFEEACRQ
                     YRAWMDEGIAPNVVAVNLSAAQFKLATDILGDITKSLERWQIAPQHLEVELTESVFIE
                     VNARYNKYLERLRSSGIRVALDDFGIGYSSLSYLASIRSTASRSPSS"
BASE COUNT          860 a         1256 c         1422 g          949 t
ORIGIN      
        1 gcccataggt ggcgtagaac ttgtcgtcgt cggcggtcgc gcgcgccatc tcgtctttca
       61 ccgggggcag cttcaattcg gtggtctcgc cggtggcgag gttggccttg acgatggtgt
      121 cgaatgccat ctgggaccaa tagccgttgc cgtccttatc gccgacgatg ccgtaggtct
      181 ggccgatggc gccgttgggg ccccgcgggt tcaccgactt gaactcagcg aacttttcgg
      241 ccaccgggtc gaaccgaagc gcgccgtcat tggtgccggc ccagatgccg cccttgctgt
      301 cgtagtcgag cgtcacaggc ccgtcgatat gggacatgcc ctccggcggc atatagatcg
      361 aaaccttttc ggttttggga tcaaccttgg cgaggccacc cttgggcatc cacgcattga
      421 accagatggt gccctcgccg tcgcggatca ggccgtggac attggcggcg ttgccgttgg
      481 cggcgtcgat ccggaacggt ttcagcgttc cggtcttgcc gtcaatgcga ccgaccgaca
      541 tggttttgtt cggcgccacc gccgcgaacc acagattgcc gtcgagatcg ggcgcggcgt
      601 cgtgcggcaa cgagccggcg cgggtggttg tcgccttggt ccagtcgctg ccgttgttgg
      661 gtggcgtcga tgacggcagt tgttggtccg gattgagtgg tacatcgtac tcccggatca
      721 gcgcgcgggc ggcttcgccg gacggacgtg gacggctcgt aatcttgaag gcgccgccgt
      781 tcggtccacg ggtcttggcg agatatttgg caagcgcatc ctggtggaaa tcgagcaccg
      841 ggttgtgctg gttcggccgg tagacgccgt agacgttgat gctcttcatc gcctcgatga
      901 tggcgtgcca accggcctcg tcgaagcgat gctgtaggaa atagcttggc gtatggcagc
      961 tggtgcagtt gttatggacg atgcgtttca tgcgcatgtc atcggcggtc tgttccggta
     1021 gcccggcgag gataaggtcg cccggcagct ggcggatcag ccgctcggta tcttcaattt
     1081 tcttgagcgc gaaatccgcc cgagcgccgg tcttcaactc ggcctcgctg ttggcggtct
     1141 cgtagcccag cgcctgcgcc caaacgcgat acttgccggg ggcaagcgcc gggaaatagt
     1201 aggcgccagc ctcgtcggtg aacaccgtgg tcgtgatggt ggcaccgacg gccttggccg
     1261 agaccgtgac gccgcccatc ttttcgccgg cgggcgacgt gacggtcccg gtcaggatcg
     1321 tgggatcggc cgcccatgtg gacgcggcga aggcggcgct cgacaacaca gctatggcgg
     1381 tgccggcaat gcgggcagcg aacgcgcacg aaaggcgtaa cgatgaaagt cgtggggatg
     1441 aaagtggtaa catcgcgggt cctcccgtgt tgatgaattt cgatccgttt caacggggca
     1501 ggttggatga tggcggtgcc ggcaacgtct tcacataaga gacgatggcg tcaatttgtt
     1561 cgggctcgaa atggtattta aagcccggca tgtttggtgt cccgttactg atcacgtcgc
     1621 gcatcaccgc ttcttggccg ccgagtgcat tcttcgacag gtcggggccg tatttggcgg
     1681 gggatgtgat ctgcagcttc acatggcaga ccatgcagga ctgattgaac agattacggc
     1741 cgagcaattg ctggggggta agcgtgtcgc tggccggaaa cggctgcgcc gccgcaccat
     1801 gaatgcctgc agcgagcacc agccaggctg ctccagcact gcatctcatg cggcctcctc
     1861 cctttttgtg acttcgtgga cttactttgc ggcatgttac gctgagactg cagcaattaa
     1921 aagcgcagtc gggatttatc caggagctgt cacacaacgg gtatttgttc ggtcttttga
     1981 ctgccgtcct ccagcgggcg gcagatcaaa atttgtggac gcactggagc accttttcga
     2041 ctaggttgac acgcgttgtg ctgtcgtcgc ctggcccatg tgacgcaggg aaaacgggtt
     2101 gcagcgcagt tttgctcatc cctttcatta atggagagat ttgtggccac cagccctcga
     2161 taccaaaacg ctagcacgcc gatttatccg gacatgaaag gaaaagttgc gctcgtgact
     2221 ggtggaagta gcggtatcgg ctttgcagct gcagatgcct ttgcgcgtca aggctcacga
     2281 gtagtgattg caagccgacg agaagcggcc gcaaaaattg cactcaaaca gctttcgaca
     2341 gcgggagacg tgcagtggcg tcctgtcgac gctgccgacg ggaaatccgt tgcgcgtttg
     2401 atcgaggcaa ccatggccct ccacggtcgc ctcgactacg cattcaataa cggtggcagt
     2461 ggcgggcgcc tcgctcgggt tgcgagcatg ccggaggaca cctggcgcaa gaccatcgac
     2521 ggatatttga catcggtctt cttgtgcatg agcgccgaaa tcgcggctat gaaaagctca
     2581 ggtaccggtg tgattgtcaa caatgcttca gtcgacgggc tgcgcggtta tccgttccct
     2641 ggcggcgcgg cttactccgc agcgaagcat ggggtcgttg gtctcacgcg tagtgccgca
     2701 cttgagcacg cggtccgtgg tcctcgcata tgcgcgatct gcccggggtg gatcaacacg
     2761 ccgccggtag caagttggat gaaacgggac agaaatgttg ccgaggcgat aatcagacag
     2821 actccgcgag gaaagatagg cagcccggaa gaagtcgctg cagcggtgct ctggctttgc
     2881 tcggaggtca gttcatttgc tgtcggcacc gtcttggcta tcgatggtgg ctatacggcc
     2941 tgaatggctc atgactttgg gcttaggagg tcgcagcaat ggatttcatg acctcttcgg
     3001 accgagcgaa cctagcgccg ccgccgattt cccgcagaac ttgcgctttc acgcggttag
     3061 gcgcacctca agcaaaccca agcggcgcgc catcggatgg aaatccctgt cgttgtgcag
     3121 ctgcggccgg cggttctcaa tgcaccaggt gccgataagc acgtcgatgg tcttgcgaac
     3181 gatgattccg cgcctgggca agaaacggaa attgcggccc gccgcgggcg gcaagtcggg
     3241 cgcggggcaa tatcatgcga ccgttctgac ctttggattg cgtaacgtcg cgaaattgat
     3301 tcggccttcg cgcagcagct cggttgcgcg agccgcgctc acaggtcgac tgaagtggaa
     3361 tccctgggcc tgctggcacc cagcggacaa tagaaagttt gtttgcgatt gcgtttcgac
     3421 gccctcggca atgaattcga cgccgaggtc cctggcaagc cgaatagcag tccggataat
     3481 gacggcattg cgggcatccg tcggcacgcc aagcatcagc tgctgggcga tcttgaggcg
     3541 gtcgatcgga tagaggccaa gtagctaagt gacgaatagc cgataccgaa gtcgtccagc
     3601 gcgacgcgga tccctgaact tcgcaaacgc tcaagatatt tgttatatcg cgcattaacc
     3661 tctatgaaca cgctttcggt gagttcgacc tccaagtgtt ggggggcgat ctgccagcgc
     3721 tccaggctct ttgtgatgtc gccgagaata tcggtcgcga gcttgaactg ggctgccgaa
     3781 agattcacag caacgacgtt tggggcgata ccctcatcca tccaagcgcg gtattggcga
     3841 caggcctcct caaatgccca acggccaagc tccaggatgt tgccgctgcg ttcggcgatc
     3901 ggaacgaaca gcgcaggaga aaccattccg cgtagcggat gacgccagcg cagcagggct
     3961 tcaagaccga taatgcggct tgtaagaagc tcaacctgcg gctgataatt cagctcgagt
     4021 tcgccgcggg ctatggcgct gcgcaattct tcggcgatgg tgatgcgctc gcgaacctgc
     4081 tggcccagct caacgctgtg caatcggcag caaccgcggc cctcctgctt tgcgcgataa
     4141 agcgcaaggt cggcttgcat catcatggcg tcagcgtcgg caagatctgg ggtatggcgc
     4201 gcgatgccga tactggcagt gacatgaaca accgagtcat tgattttgta tggttcagcc
     4261 agcgctttgg cgatctgctg cgctagcata tccgctggtt ccgaatccgg aacgtttggc
     4321 tgcagcactg cgaattcgtc gccgccaaag cgcgccacca gatcgctttg cggcacggtc
     4381 gcgcgaagac gatccgcaac ctgacgcaaa agttcatcgc cgaacgagtg gccgaatgtg
     4441 tcattggcat ctttgaagtt atcgagatca aaatagagga acgaaaa
//
LOCUS       DATILV010000301         9053 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2882598, whole genome shotgun sequence.
ACCESSION   DATILV010000301 DATILV010000000
VERSION     DATILV010000301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9053
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2882598"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..431)
                     /locus_tag="VLJ17_06895"
     CDS             complement(<1..431)
                     /locus_tag="VLJ17_06895"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018458023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004719 - protein-L-isoaspartate
                     (D-aspartate) O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HSV22741.1"
                     /translation="MKFLLDLRRRGIMDAAVLRAMEEVPRDKFVMPAQARWAYSDRAM
                     PIACGQTISQPYVVAYMTEQLEVQSQHHVLEVGTGSGYQAAILSRLAAKVTSIERYRT
                     LADAARIRLKALCYDNVDIVLGDGMAGVPDRAPFDRIIVTAA"
     gene            complement(670..1434)
                     /gene="surE"
                     /locus_tag="VLJ17_06900"
     CDS             complement(670..1434)
                     /gene="surE"
                     /locus_tag="VLJ17_06900"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HSV22742.1"
                     /translation="MRILLTNDDGVHARGLDVLEEIARSLSEDIWIVAPETDQSGVSH
                     SLSLNDPLRLREIGPRRFAVKGTPTDCVIMGARHIIPDGKPDLVLSGVNRGRNAAEDV
                     TYSGTVAGAIEGAVLGIPSFALSQAFTTATRSDPHWATALKFGPDLIRRVLTEGVPSD
                     VLVNINFPDCAPKDVKGIAVTTQGKRPQELLRIEPRHDGRGNPYFWIAYERAPKHTKR
                     DGTDLSALDDNRIAVTPLRLNMTDEPFMTRLAEILG"
     gene            complement(1709..3109)
                     /gene="serS"
                     /locus_tag="VLJ17_06905"
     CDS             complement(1709..3109)
                     /gene="serS"
                     /locus_tag="VLJ17_06905"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004828 - serine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006434 - seryl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HSV22743.1"
                     /translation="MHDIKWIRENPEAFDRGLARRGLPAEAARFIAIDERRRATIAKV
                     EQAQARRNAASKEIGEAKKAKDEARAQALMAEVNELKASIPALEAEEREVSKELEDAL
                     AAIPNMPLDEVPDGVDERGNVEHHRFGAKRNYPFTNKLKQHFELGEALGMMDFETAAK
                     LSGSRFVVLKNGLARMERALGQFMLDLHTNEHAYTEIAPPLLVKDDVMFGTAQLPKFE
                     DDQFWTIGGAYFAPRADDYREEIAQSTDVLALQMAFTQSQIALRQNRLGLIPTAEVPL
                     TNLVREQIVEEAELPLRLTALTPCFRAEAGAAGKDTRGMIRQHQFTKVELVSITTSEH
                     SKSEHERMLSCAEEVLRRLDLHYRVVTLCTGDMGFASQKTYDIEVWLPGQDIYREISS
                     CSVCGDFQARRMAARYRTKEGRQVRHVHTLNGSGVAVGRALIAVMETYQQVDGSIAVP
                     DVLQPYMGGVKIVAAK"
     gene            complement(3262..4068)
                     /gene="tatC"
                     /locus_tag="VLJ17_06910"
     CDS             complement(3262..4068)
                     /gene="tatC"
                     /locus_tag="VLJ17_06910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007610712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HSV22744.1"
                     /translation="MTQDDIEASKAPLMDHLIELRSRLIKALVAFGIALVGCFFFAKQ
                     IYNILTWPYVWVVGAENSKFIYTGLLEYFVVQLKLAMFGAAFISFPVVATQLYMFVAP
                     GLYRHERHAFLPYLIATPIMFILGAMVVYGMVWPMLTRFSIGMQQLGGDGQATIELLP
                     KVDDYLSLMMRLIFAFGVAFQLPVILTLLGRVGIITSDQLKSKRRYFIVVAFVIAAVL
                     TPPDVLSQMSLAIPLLLLYELSVVAVRWVERKAAADKAKADAAAAAKPAE"
     gene            complement(4065..4607)
                     /gene="tatB"
                     /locus_tag="VLJ17_06915"
     CDS             complement(4065..4607)
                     /gene="tatB"
                     /locus_tag="VLJ17_06915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase protein
                     TatB"
                     /protein_id="HSV22745.1"
                     /translation="MFDIAWGEFVVIAVVALIVIGPKELPAVLRAIGQWTTKIRRMAS
                     EFQSQFQEALREAEMADLKKEVDNLNETAKGFTSQFDDPLNFKEATKWEPKPDDAKPD
                     DAKPADTLPEPALVTPDGYAAETTAGGMTAAEAAPVAVEHSASEQVAASPATPPATQT
                     AAAQQPEGSGQGGAEGSVRS"
     gene            complement(4737..4991)
                     /locus_tag="VLJ17_06920"
     CDS             complement(4737..4991)
                     /locus_tag="VLJ17_06920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0043953 - protein transport by the Tat
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HSV22746.1"
                     /translation="MGSMSLWHWIVVIGVVLLLFGRGKISELMGDVAQGIKAFKKGMS
                     EDDSAKDDSPKIEPGKTEPVKTLDHQTAESSATSAKSQAS"
     gene            complement(5271..5993)
                     /gene="scpB"
                     /locus_tag="VLJ17_06925"
     CDS             complement(5271..5993)
                     /gene="scpB"
                     /locus_tag="VLJ17_06925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HSV22747.1"
                     /translation="MASFAELRAEVPEERNGEVPEMAIETRLEELRLLEALLFAASEP
                     LDEKTLAKHLPGGVEVRAALKRLQIEYAPRGVNLIRIGNKWTFRTANDLSWLLTHEAV
                     EPKKLSRAAIETLAIIAYHQPVTRAEIEEIRGVSTAKGTLDVLLETGWVRPRGRRKAP
                     GRPLTYGTTADFLAHFGLEALGDLPGLDDLKGSGLFDGTLPAGFDVPEPSDDPALRPD
                     EDPLEPGDLDLALAPRVEGAEE"
     gene            complement(6044..6856)
                     /locus_tag="VLJ17_06930"
     CDS             complement(6044..6856)
                     /locus_tag="VLJ17_06930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ScpA family protein"
                     /protein_id="HSV22748.1"
                     /translation="MTDAPSFTEDIANNHGSDEPALIVDVEGFEGPLDLLLAMARQQK
                     VDLARISILALADQYLAFVERAHRMRLELAADYLVMAAWLAYLKSRMLLPEPVPPEGL
                     SAADMAKALALRLKRLDAIREAGARLFERPLLGRDVFGRGDPQPIAEIKRPQWSAILY
                     DLISAYAAERQRHALRRVRFAKRNVWSLVEARAALQRLVGTAGEWSRLDEYLIAFVIE
                     PSMRATVFASSLAATLEMVREGAIEMHQSGAFAPIYVRKRTDVEPAGAETSS"
     gene            complement(6861..7889)
                     /gene="nagZ"
                     /locus_tag="VLJ17_06935"
     CDS             complement(6861..7889)
                     /gene="nagZ"
                     /locus_tag="VLJ17_06935"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HSV22749.1"
                     /translation="MAARAFITGLRGTVIAPDERAFLRDTSPFGLILFKRNIVDPSQL
                     KELIEELRTLCGPEAAVLIDQEGGRVQRMAPPHWPVYPAGALYGELYRRDPVCGLRAA
                     WLGARLMAADLAAVGITVDCLPVADVPVAGADQVIGDRAYGDTAQQVAAIATAVAAGL
                     QAGGVLPVVKHLPGHGRATADSHNELPVVTADRATLEATDFAAFMPLAAAPFGMTSHV
                     VFTALDPGLPATTSAIMIAQVIRGFIGFSGALMSDDVSMGALSGPIAERVKQSLAAGC
                     DLVLHCNGKLAEMQEVAVNCAELDGVALQRTARALASRRAPEVIDLDAARAEFAQLVS
                     GRAGAVTG"
     gene            complement(7936..>9053)
                     /locus_tag="VLJ17_06940"
     CDS             complement(7936..>9053)
                     /locus_tag="VLJ17_06940"
                     /inference="COORDINATES: protein motif:HMM:NF016895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HSV22750.1"
                     /translation="FEDRSSLETASNRRVLGPSIHPDPGHADEGFDFLQLSGRNEYPV
                     VPRQQAQADTGGYDHGDHHEDLLMAQEHRTYGKQDEYDDEYLEDEQEPDRDYEYDADQ
                     EPLDDESDSKPRSTTKIVVAILGLAVFGSAAAFGYRTMFKTVSSDPTPFIRADNSPTK
                     VMPPSADASLKPTNDRMGERSSERLVRRDEDPIDVGSSNRSGATGALGTSGSSVDAAG
                     FPPPATPPIANARPVRTVTIPPEQGATPPERAAPQPASRALPSPPATPRQVPPPAASA
                     PPPTASVPEANAAAGGFVVQLSAQRSEAEAQTAFRALQTKYSVLSNRQPLIRRKDQGE
                     RGIFYAAQVGPFNAKGEADQLCETLKAAGGTCFVQKN"
BASE COUNT         1660 a         2875 c         2824 g         1694 t
ORIGIN      
        1 gccgcagtca cgatgatgcg atcgaacggc gcgcggtccg gaacgcccgc catgccgtcg
       61 ccgagaacga tgtctacgtt gtcgtagcac aatgccttga gccggatgcg cgccgcatcg
      121 gcgagcgtac ggtagcgctc aatgctcgtc accttggcgg cgagtcgcga caagatagcg
      181 gcctgatagc cggagccggt tccgacttcg agcacatgat gctgcgattg cacctctagc
      241 tgctcagtca tataggcgac cacatagggc tggctaatgg tctgaccgca agcgatcggc
      301 atagcgcgat ccgaataggc ccaccgcgcc tgcgccggca tgacgaattt gtcgcgcggg
      361 acttcctcca tggcgcgcag caccgccgca tccatgatgc cgcgacgacg caggtcgagc
      421 aggaacttca tgtggtcgac gttgtaatcg gcaggtgtgg gcaaagcgac gcctcctggg
      481 taacgttagc atggcgacgc tgcggcaact cactttaagc ctagttaaca cgttgacgcg
      541 atggtggcac gccctcccgc ttagggtgga caaaggcgcc aggcacagtc cactgaaatc
      601 acggggacgg ccgatcgcgc cgtgcccacc attggggccg ccagagcaga ccgtaccggc
      661 gcctttgccc taccccaaaa tctcagccag ccgcgtcatg aacggctcgt cggtcatgtt
      721 gagccgcagc ggcgtcaccg cgatgcggtt gtcgtcaagc gccgagagat cggtgccgtc
      781 gcgcttcgtg tgcttgggtg cacgctcgta ggcaatccag aaatatggat tgccgcggcc
      841 atcgtggcgc ggctcgatac gcagcaattc ctgtgggcgc ttgccctggg tggtgacggc
      901 gatgcccttt acgtctttcg gcgcacagtc cgggaagttg atattgacca ggacgtcgct
      961 cggaacgccc tcggtgagca cgcggcggat caggtcggga ccgaatttca gcgcggtcgc
     1021 ccaatggggg tcgctgcggg tcgcggtcgt gaacgcctgg gacaacgcaa aggacgggat
     1081 gccgaggacg gcgccctcga tggcgccggc gacggtgccc gaataggtca cgtcctcggc
     1141 ggcgttgcgg ccacgattga cgccggacag caccaggtcc ggcttgccgt ccgggatgat
     1201 gtggcgcgcc cccatgatca cgcagtcggt cggcgtaccc ttgacggcga agcggcgcgg
     1261 tccgatctcg cgcagccgca gcggatcatt gagggatagc gaatgggaaa cgccggactg
     1321 gtcggtctcc ggcgccacga tccagatatc ctcggaaagc gaacgcgcga tctcctcgag
     1381 cacatccaag ccgcgcgcat gtacgccgtc gtcattggtg aggaggatcc gcatcggtca
     1441 atccatgttg gcgcgagagg gcgatcgtat gaggcccctc tccccggcac agccggggca
     1501 ttcgccggcc cctgcagggg aaggggcgga ctgccgaagg cgacgcagac ggcaataccg
     1561 cacatgctgc accgctgcca ccccctcccg gcccgctggc gccggccgac ctccctccct
     1621 tggggggagg tgaaacccag cctcgctgcg gcggccaggc gtcgaggaaa ttaggggcat
     1681 cgatagtgag cacatcgctg cgccatcgtc acttcgccgc aacaatcttc acgccaccca
     1741 tatagggctg cagcacatcc ggcacggcga tcgaaccgtc gacctgctgg taggtttcca
     1801 tcaccgcaat cagcgcgcga ccgacggcga cgccggagcc gttgagagtg tggacgtggc
     1861 ggacctggcg gccctccttg gtccgatagc gtgccgccat gcggcgggct tggaaatcgc
     1921 cgcacaccga gcaggacgag atttcgcggt agatgtcctg acccggcagc cagacctcga
     1981 tgtcgtaggt cttctgcgag gcgaagccca tgtcgccggt gcacaaggtg acgacccggt
     2041 agtgcagatc gaggcggcgc agcacctcct cggcgcagct gagcatgcgt tcatgctcgg
     2101 atttgctgtg ctcggacgtg gtgatagaga ccagctccac tttggtgaac tggtgctggc
     2161 ggatcatacc gcgggtgtcc ttgccggcgg cgccagcttc ggcgcggaag catggggtga
     2221 gcgcggtgag ccggagaggc agttcggcct cctcgacgat ctgctcgcgc accaggttgg
     2281 tgagcgggac ttcggcggtg gggatgagcc ctagacgatt ttgtcgcaac gcgatctggc
     2341 tttgggtgaa cgccatttgt agcgccaaga catcggttga ttgagcgatc tcctcacgat
     2401 aatcgtcagc gcgaggcgcg aaatacgcgc cgccaattgt ccaaaactga tcatcttcaa
     2461 acttcggcaa ttgcgccgtt ccaaacatca cgtcatcttt cactagtaac ggcggcgcga
     2521 tttccgtgta tgcatgttca tttgtatgca gatcaagcat gaactgcccg agcgcgcgct
     2581 ccatccgggc gagcccattc ttcaacacca cgaagcgcga gccagacagc tttgccgctg
     2641 tctcgaagtc catcattccc agcgcctcac ccagctcaaa atgttgcttt agcttgttcg
     2701 tgaacggata gttgcgcttc gccccgaacc tgtggtgctc cacattgccg cgttcgtcga
     2761 cgccgtccgg cacttcgtcg agcggcatgt tgggaatcgc cgccaacgcg tcttcgagtt
     2821 ccttggaaac ctccctttcc tccgcttcca atgccgggat cgacgccttc aattcattga
     2881 cctcggccat gagggcctgc gctcgcgctt cgtccttggc cttcttggcc tcgccgattt
     2941 ccttcgacgc cgcgttgcgc cgcgcctggg cctgctcgac cttggcgatg gtggcacggc
     3001 ggcgctcgtc gatggcgatg aaccgcgccg cctcggcggg cagcccgcgt cgcgctaaac
     3061 cgcgatcgaa cgcctccgga ttttcgcgaa tccatttaat gtcgtgcatt gggtttctcg
     3121 ccaaattccc ccgtcgtcat acggtccccg aacttgatcc ggggattgtc ccggccatcc
     3181 acgccttttt tccagatcct gccgaagacg tggatgcccg gcgcagggcc gggcatgacg
     3241 aatcctcaat ttacgccgtt gtcactcagc gggtttcgct gcggcggcag cgtccgcctt
     3301 tgctttatcg gctgctgcct tgcgctcgac ccaccgcacg gccaccacgg aaagctcgta
     3361 gagaagcagc agcgggatcg caagggacat ttggctaagc acatccgggg gcgtgagcac
     3421 cgccgcgatc acgaatgcga ctacgatgaa atagcggcgc ttcgatttga gttggtcgga
     3481 cgtgatgatg ccgacccggc cgagcagcgt gagaatcacc ggaagctgaa acgcgacgcc
     3541 aaaggcgaag atcagccgca tcattaggct gaggtagtcg tcgaccttgg gcagaagttc
     3601 gatcgtcgcc tgcccgtcgc cgccgagttg ctgcatcccg atggaaaacc gcgtgagcat
     3661 cggccacacc atgccgtaaa ccaccatcgc gcccaggatg aacatgatcg gcgtcgcgat
     3721 cagatacgga agaaaggcgt ggcgctcatg ccgatagagg cccggcgcga cgaacatgta
     3781 gagctgggtg gcgacgaccg gaaaggaaat gaaggcggcg ccgaacatcg cgagcttgag
     3841 ctggacgaca aaatattcga gcagtccagt atagatgaac ttcgaattct cggcgcccac
     3901 gacccacaca tacggccacg tcagaatgtt atagatctgc ttggcaaaga agaagcaacc
     3961 gacgagcgcg atgccaaaag cgaccaacgc cttgatgagc cgcgaccgca gctcgattag
     4021 gtggtccatc aggggcgctt tggaggcttc gatgtcgtcc tgagtcatga acggacgctc
     4081 ccctcagccc ccccttggcc actcccttca ggttgttggg cggcagcggt ctgtgtcgca
     4141 ggcggcgtgg ctggagaggc cgcaacttgc tcgctcgcgg aatgctcgac tgcaaccgga
     4201 gccgcttcgg cggccgtcat gccgcccgct gtcgtctccg cagcataacc gtcgggtgtg
     4261 acgagcgcgg gctcgggcag cgtgtcggcg ggcttggcgt catccggttt ggcgtcatcc
     4321 ggtttgggct cccatttcgt cgcctccttg aaattaagcg gatcgtcgaa ttgggatgtg
     4381 aagcctttgg cggtctcgtt gagattgtcg acctcttttt tcagatcggc catctcggct
     4441 tcacgcaaag cttcctggaa ttggctttga aattccgacg ccatgcgccg aatcttggtg
     4501 gtccactgcc cgatcgcgcg cagcacggcg ggcaattcct tcggcccgat gacgatcagt
     4561 gccaccacgg cgatgacgac aaactctccc catgcaatgt cgaacattgc gcttcaactc
     4621 cgaacgccgc cgctgccgtt gggcgtgtct acgggaactt cctgccgcga gcgcaggccg
     4681 caccggtcag gcgatggggg ccgaccaaca cggcgtccgc ttcgccagca tgagcctcat
     4741 gaggcttggc tcttggcgct ggtggccgat gactcggcgg tctgatgatc cagcgtcttc
     4801 accggttcgg tcttgccggg ctcaatcttg ggggaatcgt ccttggcgct gtcgtcctcc
     4861 gacatgccct tcttaaaggc tttgatgccc tgggcgacgt cgcccatcaa ctcggagatc
     4921 ttgccgcgcc cgaacagaag aagcacgaca ccgatcacca cgatccaatg ccagagactc
     4981 atggaaccca tagggttaac cctctctgca acgacgagcc gcgcatccgc ggcctcagct
     5041 ctcaatttag ccagaaccta ggcctcgcgg ccggcaaaaa caagcaccgg gggccagatt
     5101 cgcgctacga ccaatgggca cggttactgt tcgcccgccc cgatgcgttg gtgatcgcaa
     5161 cgggaatcga tgcttttgcc tcccgtctcc gggcacagcg gtgcgaagcg ccgggagggg
     5221 ggcgacacag gcaaatccgt gacgtggtaa cgctgccctc cgccgtaccc ctactcctct
     5281 gccccctcca cgcggggcgc gagagcgagg tcgagatcgc cgggttccag cgggtcttcg
     5341 tcgggacgga gcgccggatc gtcggagggc tccggcacgt cgaagcctgc cggcagagtg
     5401 ccgtcgaata gaccggagcc cttgaggtcg tcgagccccg gcaagtcgcc aagcgcttct
     5461 aggccaaaat gggcaaggaa atccgccgtg gtcccatacg tcagcggccg gcccggcgcc
     5521 ttgcggcggc cacgcgggcg gacccaaccg gtctcgagca ggacatcgag cgtgcccttg
     5581 gctgttgaga caccgcgaat ttcttcgatc tcggcacgcg tgaccggctg atgataagcg
     5641 atgatggcga gcgtctcgat cgccgcacgc gacagctttt tcggctccac ggcctcgtga
     5701 gtgaggagcc aggacaggtc gttcgcggtg cggaacgtcc atttattgcc gatgcggata
     5761 agattgacgc cgcgcggcgc gtactcaatc tgcagccgct tgagggctgc gcgtacctcg
     5821 acgccgcccg gcaggtgttt ggccagcgtc ttctcatcga gcggttcgga tgcggcgaaa
     5881 aggagtgcct ccaacaaccg aagctcttcc agccgggtct caatcgccat ttccggcacc
     5941 tcgccgttcc gctcttctgg gacctctgcc cgcaactcgg caaaactcgc catcaatatg
     6001 tcctcccggc tgttgctttc ggtccccgca aaatcgacat tcctcacgat gaggtctcgg
     6061 cgccagcggg ctcgacatct gtgcgcttgc gcacatagat cggggcgaac gcgccagact
     6121 gatgcatttc gatggcgcct tctcgcacca tctcgagcgt cgcggcgagc gaagaggcaa
     6181 agactgtcgc ccgcatcgac ggctcgatca cgaaggcgat caagtattcg tcaagccggc
     6241 tccactcgcc ggcggtgccg accaagcgtt gcagagccgc acgggcctcg acgagcgacc
     6301 acacgttgcg cttggcgaac cgcacgcgcc gcagcgcatg tcgctggcgc tccgccgcat
     6361 aggcggatat cagatcgtag aggattgccg accattgcgg ccgtttaatt tcggcgatcg
     6421 gttgcggatc accgcggccg aagacatcac ggccaagcag cggccgctcg aacaaccgcg
     6481 caccggcttc gcggatggca tcaagacgct tgagccgcag cgccagagcc ttcgccatgt
     6541 cggcagcgct caggccttcc ggtggaaccg gctccggcag cagcatgcgc gatttcaaat
     6601 aggcgagcca ggcggccatc accaggtaat cggcggccag ctcaaggcgc atccggtgcg
     6661 cccgttccac gaatgcaaga tactggtcgg cgagtgccaa tatggagatc ctggcgagat
     6721 ccaccttctg ctggcgcgcc atcgcgagca gaaggtcgag cgggccttcg aagccttcga
     6781 cgtcaacgat cagcgctggc tcgtcgctgc cgtgattgtt cgcgatatcc tcggtgaacg
     6841 aaggcgcgtc cgtcatactg tcatcccgtc acggcgccgg ctcgaccgga cactagttgc
     6901 gcaaattcag cccgcgccgc gtcaagatcg atgacttcgg gcgcgcggcg cgacgcaagc
     6961 gcccgcgcgg tccgttgcaa ggccacaccg tcaagttccg cacaattcac cgcgacctcc
     7021 tgcatttcgg caagcttgcc gttgcaatgg aggacgagat cgcaacctgc ggccagcgac
     7081 tgcttgactc tttcggcaat cggacccgac aaagccccca tcgacacatc gtcgctcatc
     7141 agggctccgg agaatccgat aaatccgcga atcacttgtg cgatcataat cgccgacgtg
     7201 gttgccggaa ggcccggatc gagggctgtg aataccacgt gggaggtcat gccgaacggc
     7261 gctgcagcta gcggcataaa ggccgcgaaa tcagttgctt ccaaagttgc gcggtcggcc
     7321 gttacaaccg gcagctcgtt gtgactgtca gcggtggcgc ggccgtggcc gggcagatgc
     7381 ttaaccaccg gcagcactcc accggcctgc aaccccgccg ccaccgccgt cgcaatcgcg
     7441 gcaacttgtt gcgcagtatc gccgtaggcg cggtctccga tcacttggtc ggcgccggcg
     7501 accggcacat cggcaaccgg caggcaatcg accgtaatgc cgaccgccgc gaggtcggcc
     7561 gccatgagcc gcgcgccgag ccacgccgcg cgtaagccgc acaccgggtc gcgccgataa
     7621 agttcgccat agagggcgcc cgccgggtag acgggccagt ggggcggcgc cattcgctgc
     7681 acccggcctc cttcctggtc gatcaagacg gccgcttcgg gcccacataa tgttcttaat
     7741 tcttcaatta attcttttag ttgtgacgga tccacaatat tacgcttgaa cagaatgagg
     7801 ccgaatggtg aggtgtcgcg caggaacgcc cgctcgtcgg gagcgatcac cgtacctctc
     7861 aatccggtaa taaaagcccg cgccgccatg tcggcggctt aacccgcgct gcccgcaagg
     7921 gcaagcgctc agccgtcaat tcttctgaac gaaacaggtt ccgcccgcgg ctttgagcgt
     7981 ttcgcagagc tgatccgcct cgccttttgc gttgaacggg ccgacctggg cggcatagaa
     8041 aatgcctctt tcgccctgat ctttgcgacg tatcagcggc tggcggttac tcagaaccga
     8101 atatttcgtc tggagggcac gaaatgcagt ttgggcctct gcctcagacc tctgcgcgga
     8161 aagctgcacc acgaaaccgc ccgccgcagc gtttgcttcg ggcacgctgg ccgtcggagg
     8221 gggcgcgctg gcggccggtg gcggcacctg tcgcggcgtt gccggcggcg atggcaaggc
     8281 gcggctagct ggctgtggcg cggcacgctc tggcggagtc gcgccctgct ccggcggtat
     8341 tgtgacggtg cgcaccggcc tagcattggc tatcggtggc gttgcgggtg gcggaaatcc
     8401 ggccgcatcc acggacgatc cagatgtgcc gagagctcct gtggcaccgg atcgattcga
     8461 agaccccaca tcgataggat cctcatcgcg gcggaccaag cgctcgctgg agcgctcgcc
     8521 cattcgatca ttggtcggct ttaggctcgc atcggcggac ggcggcatca ccttggtggg
     8581 cgaattgtca gcccgtatga agggggtggg atctgacgag acggttttga acatggtgcg
     8641 gtagccgaac gcggcagcgc tgccgaaaac cgcaagccca agtatcgcta caacgatttt
     8701 ggtggtgctg cggggtttgg aatctgattc gtcgtcgagt ggctcctgat ccgcatcgta
     8761 ttcgtagtcg cggtccggct cctgctcatc ttcaagatat tcgtcgtcgt attcgtcttg
     8821 cttcccatag gttcgatgct cttgcgccat cagcagatcc tcgtgatgat cgccgtggtc
     8881 atagccccca gtgtcggctt gcgcctgctg ccggggcacg accggatatt cattgcgacc
     8941 ggacagttgc agaaaatcga aaccttcgtc ggcatgacct gggtccgggt gaatcgacgg
     9001 tcccaggacg cggcgattgg aggcggtttc aagcgacgag cgatcctcaa ata
//
LOCUS       DATILV010000302         1699 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4672282, whole genome shotgun sequence.
ACCESSION   DATILV010000302 DATILV010000000
VERSION     DATILV010000302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1699
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4672282"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            279..1100
                     /locus_tag="VLJ17_06945"
     CDS             279..1100
                     /locus_tag="VLJ17_06945"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HSV22751.1"
                     /translation="MKLEKPTQVLDLNEKKTQVLDLNEKKMCQEDIMTDFASQRPLLQ
                     EQILLHELNHRVNNEFATAISIVSRAAASSNDKAKGALSRVADLLHRFADVHRALQMP
                     EYDTPVDAAAYLRQLCRSISRSQLDSRQIELVLAAQPLRLSADRCWRLGMIVFELINN
                     AARHAFPGREGEIRVELLRVGAFAKCSVTDNGSAAPTVRPGRGLKIIDELSKSLGGRC
                     IQKFEPRGSWSILAFPCHSELIVTAERPRRVVRISEHAPQLWSGEPAAGSEEALQ"
     gene            1097..1648
                     /locus_tag="VLJ17_06950"
     CDS             1097..1648
                     /locus_tag="VLJ17_06950"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HSV22752.1"
                     /translation="MTNIHTGTPMSGTRPRCVEEGFRTSPSEPSRVCPRPRTRADIEN
                     DLPILLSDVARHTRTCAHQVYGLTAPFIVLVRLERQPDVPQCELAAAAEMAPITIARL
                     IDRLEELALVKRCPDPEDRRVWRLRLTPAAAPILREVKRRRAELHTVMTKGIDPAVLD
                     AMTAGLLHMKANVSSQRPAKASA"
BASE COUNT          371 a          493 c          512 g          323 t
ORIGIN      
        1 ggatgcacgc tcggccaccg catccatggt ggtcgccgcg ataccgcgct caaggaacag
       61 ggcgtaggcc gcatccataa tggcctcgag cttggcgagg tcacggggcc ggccagggcc
      121 cgggcgtttg ggatggattg atatcaccga ctcgtgatct ccaattattg gacctaatcg
      181 tccactgatt attatatatg tacgagagag tacagcaaat ggcagctgga agcaaccaag
      241 tcgcagccct tttgcccgcg atgcggagag caagatgaat gaagttagag aagccgacgc
      301 aggttctcga tctgaatgaa aagaagacgc aggttctcga tctgaatgaa aagaagatgt
      361 gtcaggagga catcatgacg gattttgcca gtcagcggcc gttgctgcaa gaacaaatcc
      421 tgctgcacga gctgaaccat cgggttaaca acgaattcgc cacagcaatc agcatcgtgt
      481 ctcgagccgc ggcctccagc aatgacaagg ccaaaggtgc tctgtcacga gttgcagacc
      541 tgctccaccg atttgccgac gtccatcgcg cgctgcagat gccggaatac gacacgccgg
      601 tcgacgcagc ggcgtatctt cgtcaactct gccgttcgat cagtcgatcg caacttgata
      661 gcagacaaat cgagcttgtc ctggctgctc aacctttgcg gctgtcggcg gaccgttgtt
      721 ggcggctcgg aatgatcgtg ttcgaactga taaacaatgc ggcacggcat gcgttcccgg
      781 gcagggaggg cgagattcgc gtcgagttgt tgcgcgttgg cgcatttgcg aaatgtagtg
      841 tcaccgacaa tggatcggcc gcgccaacgg ttcggccagg gcgcgggctc aaaatcattg
      901 acgagttgag caagagcctc ggcggacggt gcatacagaa gtttgaaccg cgtggatcgt
      961 ggtcgatctt ggctttccct tgccacagcg aacttatcgt tactgcggag cggccccgaa
     1021 gagtggttcg aatttcagaa cacgcccccc agctttggtc cggcgaacca gccgcgggtt
     1081 cggaggaggc gcttcaatga ccaacattca caccggcacg ccaatgtcag gaacgcgccc
     1141 gcggtgcgtg gaggagggct ttcgaacttc gccatcggag ccgtcaaggg tatgcccgcg
     1201 gccgaggacg cgcgccgata tcgagaacga tttgccgatc ttactcagcg acgtcgcccg
     1261 ccatacgcgc acttgtgccc accaggtgta cggtttgact gcgccattca ttgttctggt
     1321 gcgactggag cggcagcccg acgtgccgca atgcgaactc gcggccgctg ccgagatggc
     1381 gcccataacc atcgctcgtc tcatcgaccg tctcgaagag cttgccctcg tcaagcgctg
     1441 ccccgatccc gaggaccggc gcgtctggcg tctgcgattg acgccagccg cggcgccgat
     1501 cctgcgcgag gtcaagcgcc ggcgagccga gcttcacacc gtcatgacca aaggcatcga
     1561 tcccgcagta ttggacgcga tgaccgcggg tcttcttcat atgaaagcaa acgtgagcag
     1621 ccagcggcca gccaaagcat ccgcgtaggg agcgtcacat gtacaaaata gatgagatcg
     1681 agcgcccgtc gcaggatca
//
LOCUS       DATILV010000303         2682 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3393690, whole genome shotgun sequence.
ACCESSION   DATILV010000303 DATILV010000000
VERSION     DATILV010000303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2682)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2682)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2682
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3393690"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..827)
                     /locus_tag="VLJ17_06955"
     CDS             complement(<1..827)
                     /locus_tag="VLJ17_06955"
                     /inference="COORDINATES: protein motif:HMM:NF019474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV22753.1"
                     /translation="MGWAADRTSPDFVVIHSLDPEDAAFTTALRAMVSSTKGVVPRGT
                     EGRAQFDALMESVPPRDDVTFEAGALGAIPGIWVYPAKGRPDEAVVHLHGGWFNFGSA
                     KAYRHLVGHIAARAEARAFIPDYRLAPEHPFPAATDDALACYRGLAGSGVRRIALTGD
                     SAGGNLALVLASRVIGEAVSTNATLVGVAVLSPVTDLTLSGATYDTRADADPFFTRPQ
                     VAELVRSYLGNADARHPLASPLQSELAGMPPVRIHVGDDEVLLDDSLRYVERAVTARV
                     "
     gene            complement(828..1571)
                     /locus_tag="VLJ17_06960"
     CDS             complement(828..1571)
                     /locus_tag="VLJ17_06960"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HSV22754.1"
                     /translation="MIDIFRRKDPAAVDRHFAETFIQHDPNLADGLGGMKSFAAEVAS
                     SPAADITIYRTLVDGDLVLLHSRYEGVGRYGGPAIAFDLFRFKDGKIVEHWGGQEPEE
                     PPNLSGRTQVDGPTEVLDRKKTEANRTLVRTYRETVMVALRFDRIEEFVEDAHYAQHA
                     SKIGDGTAQLRARIASVAKEGGQLYLTPRRFVADGNFVLVLSEGDLPSGPTALYDLFR
                     VENGKIVEHWDVLTPIPPRGQWKSQNGPF"
     gene            complement(1714..1941)
                     /locus_tag="VLJ17_06965"
     CDS             complement(1714..1941)
                     /locus_tag="VLJ17_06965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22755.1"
                     /translation="MALASDFESVIDALPIRARARVLGAKLKVGQSVEYALGERRHAY
                     PVPSSGIVDVTMNDGATKGELRGRGHEDVET"
     gene            complement(2138..>2682)
                     /locus_tag="VLJ17_06970"
     CDS             complement(2138..>2682)
                     /locus_tag="VLJ17_06970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020487350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSV22756.1"
                     /translation="ALEFRRKLMGNHPKHLAVLNAAAERGNWGRPAASGVFRGLAQAM
                     VFGSYVAACAEVSVVGSNVKVHRIVAATDPGYAVNPGQIERQVAGSFVYGLTGLFLGG
                     ISVKDGKVEQQNFHNYDMMRIRQMPKVETVLVPSGGFWGGVGEPTICVAAPAVLNAIA
                     AATGKRYRTLPLQAEGLSLV"
BASE COUNT          552 a          815 c          771 g          544 t
ORIGIN      
        1 actcttgcgg taaccgcacg ctcaacatag cggagcgagt cgtccaacag cacttcgtca
       61 tcaccgacat gaatgcggac gggcggcatc ccggcaagtt cactttggag tggcgaagcc
      121 agtgggtgtc tagcatcggc atttccgaga taggaacgca cgagttctgc cacctgcggg
      181 cgcgtgaaaa aaggatcggc atccgcgcgt gtgtcatagg tcgcgccgga aagagtcagg
      241 tcggtaaccg gcgacagcac ggcgaccccg acaagagttg cgttggtgga gacggcttcg
      301 ccgataacgc gcgacgcgag taccagcgcg agattgcctc ccgcggaatc tcctgtaagg
      361 gctatccggc gaacgccgct cccggcgagc ccccgataac atgccagcgc atcgtctgtg
      421 gcggcaggga agggatgttc aggggcaagc cgatagtccg ggataaacgc cctcgcttcg
      481 gctctcgcgg caatatgccc gacaagatgg cggtaggcct tggccgatcc aaagttgaac
      541 cagccaccgt gcaaatgtac gactgcctca tccggccgcc ctttcgccgg atagacccag
      601 attcccggta tagcgccgag ggcgcctgct tcgaatgtca cgtcgtcgcg cggcgggacg
      661 ctctccatga gagcatcgaa ctgtgcgcgt ccctcggttc cgcgtggcac cacgcccttg
      721 gtggaactga ccatggcgcg cagggcggtg gtgaacgcag catcttcggg gtcgagcgaa
      781 tgtattacga caaagtccgg cgacgtgcgg tctgcagccc atcccatcta aaatggccca
      841 ttctggcttt tccactgacc ccggggaggg atcggcgtca aaacatccca atgctcgact
      901 atctttccat tctcgaccct aaacagatcg tagagcgcag taggtccgga cgggaggtct
      961 ccttccgaca gcacaagtac aaagttgccg tcagccacaa aacgacgagg ggtgagatac
     1021 aattgccctc cctcctttgc cacgcttgca attcgagccc ttaactgagc ggttccatcc
     1081 ccaattttcg acgcgtgctg tgcatagtga gcgtcttcaa caaactcttc gatgcgatcg
     1141 aagcgcagcg cgaccatgac tgtctccctg taggttcgca ccaacgttcg attggcctct
     1201 gtctttttac gatcaagaac ctcggtggga ccatccactt gcgtgcgccc tgacagattg
     1261 ggaggctcct ccggttcctg tcctccccaa tgttcaacga tcttgccgtc cttgaagcgg
     1321 aacaggtcga aagcaatcgc cggtccgccg taacgtccga cgccttcgta tcgggaatgc
     1381 agcaggacga gatctccgtc cacaagtgtg cggtagatcg ttatgtcggc ggcaggagag
     1441 ctcgctactt cggcggcaaa tgatttcatt ccaccaagac catcagcgag gttcggatca
     1501 tgttgtatga atgtctcggc aaaatgccga tcgactgcag cgggatcttt cctgcgaaag
     1561 atgtcgatca tgacttggcg agcgcttgcg cccaaagtgt ccgagacgat cctcagatcc
     1621 tgcgatgttt ggggcgctgc cgactgagcc aagcttgagt tggccgcgcc cgacatcgct
     1681 atgacggcgg tgccgccacc tgccgtcaaa atatcacgtc tcgacatctt catggcctct
     1741 tcctctaagt tcgcccttcg ttgcgccgtc attcatcgtg acgtcgacga tgcccgacga
     1801 aggtaccggg taagcgtgcc gtctttcgcc aagcgcatat tcaacagact ggccgacctt
     1861 gagcttggcc cccagcacgc gggcacgcgc gcggatgggc agtgcgtcga tgacgctttc
     1921 gaagtcgctc gcaagggcca caaacgtcgg atcggaacag gatgttcggc ggtggccatg
     1981 gtaatgtacc tacaaaggca accctgcgca cgaatcgaag cacgcgacat gctttcggtc
     2041 tgtccaagct agcggttatt tgcggggcgg caggtcttgc atctcaacgt tcctgcactg
     2101 gagtaccttg cttagccaag gatggcggat atgaccatca aacgagggaa aggccttccg
     2161 cttgaagcgg caaagtccgg tatcgtttcc ccgttgcggc tgcgatggcg ttcagtacgg
     2221 caggcgccgc aacgcagatc gttggctcac cgacgccgcc ccaaaatcca cccgacggca
     2281 ccaggaccgt ttcgaccttt ggcatttgcc tgatgcgcat catgtcatag ttatggaaat
     2341 tctgctgctc gaccttcccg tccttgaccg agatgcctcc aagaaacagg ccggtgaggc
     2401 cgtacacgaa cgatcccgca acttgtcgct caatctggcc cggatttacg gcgtagcctg
     2461 gatcagtagc ggcgacgatc cggtgaacct tgacgttgct gccaacgacc gacacctctg
     2521 cgcatgcagc gacatagctg ccgaaaacca tggcttgggc gagaccgcgg aagacgcctg
     2581 atgcggccgg cctaccccaa ttgccccttt ccgcggcggc gttaaggacg gcgagatgct
     2641 tcgggtgatt tcccatcagt ttgcgccgga actctaatgc gt
//
LOCUS       DATILV010000304         1859 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_71462, whole genome shotgun sequence.
ACCESSION   DATILV010000304 DATILV010000000
VERSION     DATILV010000304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1859
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71462"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(236..>1859)
                     /locus_tag="VLJ17_06975"
     CDS             complement(236..>1859)
                     /locus_tag="VLJ17_06975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcdA"
                     /protein_id="HSV22757.1"
                     /translation="FVFARADQPFVKTGLPILVGMAVTFAAVATLAAVAGAWVVDANE
                     YGRTIAMVLLAVFGLTLIFPGLADRVMKPFVDFGATLSSSAERGETDRGNAVLPSFVL
                     GVATGFLWAPCAGPVLGLILTGAALNGANVGTTLLLLAYAFGAATSLALALAVGGRVF
                     AAMKRSLGAGEWVRRGLGVAVLAAVVAIAFGVDTGFLTRISLSRTASLEQGLIDRLRP
                     ASAVEGGLPSLTGAEAWLNSPPLTPEGLKGKVVLIDFWTYSCINCLRAIPYVQAWAEK
                     YKDHGLVVIGVHTPEFAFERKIENVRRAVSDLKIGYPVAIDNEYKIWRAFDNKYWPAH
                     YFIDANGRVRYHHFGEGEYDESERVIQQLLVEAGNGNVPDGLVSVDASGAEAAPSANE
                     DKSPETYLGYDRERGFVPRGGIVHDQSYLYEITTPQLNQWSLSGNWTIKSEDATLNKE
                     GGRIIYRFNARDLHLVLGPAADGRPIRFRVTLDGEAPGADHGTDADANGQGVVNEQRL
                     YQLVRQNGMVSDRTFEIEFLDPGVQAYAFTFG"
BASE COUNT          398 a          559 c          545 g          357 t
ORIGIN      
        1 gccggtcttt gccattgtga tgatgtgctt agcgactcgc gattagtgat aaggccacca
       61 tcgttatcaa acgccgtgcg gcacgccttg ccgctactgt cgaacctgcg gtccttcggg
      121 tcgttgcagt tcgtggttgt cgaaagacaa gttcattttg caggacttcc tgaacttccg
      181 acgtggctgc ccgccggaaa ggccaacaga tcacgcaagg tagagagtgg atattttagc
      241 cgaacgtgaa agcgtaggct tgaacacccg gatcgagaaa ttcgatttcg aacgtgcggt
      301 cggagaccat gccgttttgc cggacgagct gatacaaacg ctgctcgttg acgacaccct
      361 gaccgttggc gtcagcgtca gtgccgtgat cggcgccggg agcttcgccg tcgagggtca
      421 cgcggaaccg aatcggcctg ccgtcggccg cggggcctag aacgagatgc agatcgcggg
      481 cattaaaccg ataaatgatg cggcccccct ccttgttgag agtcgcgtcc tcgctcttga
      541 tcgtccaatt gcccgatagg ctccattgat tgagctgtgg agtcgttatc tcataaaggt
      601 aactctgatc gtggacgatc ccgccccgcg ggacgaagcc gcgttcacgg tcgtagccaa
      661 ggtaagtctc cggcgattta tcttcgttcg cgctcggcgc cgcttccgcg ccggatgcat
      721 cgacggatac aaggccgtcc ggaacgttac cgttgccggc ttccacaagg agctgttgaa
      781 tcactcgttc ggattcgtcg tattcgccct cgccgaaatg atggtaacgc acgcgcccgt
      841 tggcatcgat gaaatagtgc gcgggccaat atttgttatc gaaagcgcgc cagattttat
      901 attcgttgtc gatcgcaacg ggatatccga tcttcaggtc ggaaaccgct cgtcgtacgt
      961 tttcaatctt gcgctcgaag gcaaattccg gcgtatgcac gccgatcacg accaggccat
     1021 ggtccttgta tttttcggcc caggcttgga cgtagggtat agcgcgaagg cagttgatac
     1081 aggaatatgt ccaaaagtcg atcaggacga ccttcccctt aagaccttca ggcgttaacg
     1141 gcggcgaatt gagccatgcc tccgcgcctg tcaatgatgg gaggccgccc tccaccgccg
     1201 atgccggccg cagacggtca atgaggcctt gttcgagtga tgccgttcgc gagagcgaaa
     1261 tgcgagtgag gaagccggta tcaacaccga aagcaattgc gacaacggcc gccagcacgg
     1321 cgacgcctag gccgcgcctg acccactcac ctgctcccaa ggagcgcttc atcgccgcga
     1381 agacacggcc ccctaccgcg agagcaagcg ccagcgacgt tgcggctcca aaggcatagg
     1441 cgagcagcaa cagtgtcgtg ccgacattgg cgccgttgag cgcggcgccc gtcaaaatca
     1501 ggccgagcac cggtcccgcg catggcgccc acaggaagcc ggtcgcgacc ccgagcacaa
     1561 acgatggcag caccgcattg ccacgatcgg tctcgccgcg ttccgcggaa ctggaaagcg
     1621 tggcgccgaa gtccacgaag ggcttcatta cgcggtcagc gaggccggga aagatcagcg
     1681 tcaagccaaa taccgccaga aggaccatgg caatggtgcg gccgtattcg ttggcgtcga
     1741 ccacccacgc acctgcgacg gccgccaatg tcgcaacggc ggcaaatgtc acggccatac
     1801 cgaccaatat cggcagcccg gttttcacaa aaggctgatc ggcccgcgca aacacaaac
//
LOCUS       DATILV010000305         2271 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4160195, whole genome shotgun sequence.
ACCESSION   DATILV010000305 DATILV010000000
VERSION     DATILV010000305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2271
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4160195"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(99..965)
                     /gene="atpG"
                     /locus_tag="VLJ17_06980"
     CDS             complement(99..965)
                     /gene="atpG"
                     /locus_tag="VLJ17_06980"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit gamma"
                     /protein_id="HSV22758.1"
                     /translation="MHSPRDLRRRIRSISSTAQITKAMQMVAASKMRRAQLAALAGRP
                     FVQVLYRIQREATTRMGEFSHPLLESREVRKRAVILVGADKGLCGALNSNVCRLAADF
                     DPQSTLYITAGRKAAQFIARTGRQLVADFAYTDTPRISEARAISAFARDLFLKREVDQ
                     VQVIATRFVNTLTQQALCLDYLPVGEVRTIKIPGVRSEEELSNDTTESLFEPSPEFVL
                     SYLISHYLDIYIYQVLLNAKASEQSARMVSMKNATDSAENLIKDLTLEYNKLRQGNIT
                     KELLEIAGGQSE"
     gene            complement(1039..>2271)
                     /gene="atpA"
                     /locus_tag="VLJ17_06985"
     CDS             complement(1039..>2271)
                     /gene="atpA"
                     /locus_tag="VLJ17_06985"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020179833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HSV22759.1"
                     /translation="WRVVNTLGEPLDGKGPIESNVFYPVEKLAPGIIRRSPVRQPVQT
                     GIMAIDAMIPIGRGQRELIIGDRSTGKTTICIDTIISQAGLNKAAEAAGDKDYRPLYC
                     IYVAIGQKQSNIARIISVLEQAGAMPYTIILASPASDSATNQYLAPFAGAAMGEWFMD
                     NGMDALIIYDDLSKHAVAYRQVSLVLKRPSGREAYPGDVFYLHSRLLERAARVGEKYG
                     NGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLETDLFYQGVRPAISVGLSVSRVG
                     SAAQLKAMKQVAGQLKGDLAQFRELAAFAQFGSELDAKTQAQIDRGKRIMEIFKQPQY
                     SPIGLETQVSVIWAVQNGYVDDVPVERVKEFQLKLTEYLSTRKPELLAKIGKEKALSA
                     PLTAEVKAALDQFKETWR"
BASE COUNT          479 a          600 c          645 g          547 t
ORIGIN      
        1 gaaattcgac gtccacaacg ggaccgagga tctttacaat cttgcctgta ttcatatttg
       61 tatccactca ccgcaatctg aaatgtactc gattcgtttc attcggactg cccgccagca
      121 atttccagca gttccttcgt aatattgcct tgccgcaact tgttgtattc gagcgtcagg
      181 tccttgatga ggttttcggc actatcggtg gcgttcttca tcgacaccat acgcgcactt
      241 tgttcgctgg ctttggcatt cagcaacact tgatagatgt aaatatcgag atagtgcgaa
      301 atcaggtagc tcagcacgaa ttcagggctg ggctcaaaca gggactcggt ggtgtcgttt
      361 gagagttcct cttcggatct gacgcctgga atcttgattg ttctcacttc gcctaccggc
      421 agataatcca gacagagggc ctgttgggtt agcgtgttga cgaaacgggt ggcgatcacc
      481 tgaacctggt ccacttcccg tttcaagaag aggtcgcggg caaatgcaga aattgctctg
      541 gcctcggaga ttcggggagt atcggtataa gcaaaatcgg cgaccaattg ccggccggtg
      601 cgcgcgatga attgcgcggc cttacgccct gctgtgatgt aaagcgtgga ctgcggatcg
      661 aagtcggcgg ccagtcggca gacattgctg ttgagcgcac cgcagagacc tttgtccgcg
      721 ccaacgagaa tgacagcgcg cttgcggact tcgcgggatt cgagtagggg atggctgaac
      781 tctcccatac gagttgtcgc ttcacgctga atacggtaca gcacctgcac gaagggacgt
      841 ccggcaaggg cggcgagttg cgctctgcgc atttttgacg cagccaccat ttgcatcgcc
      901 ttggtaattt gggcggtact actgatggag cgtatccgtc gtcgcaaatc gcgcgggctg
      961 tgcataatcg gtagtcctag gtcctacatc tcggagagaa atctggcatc caaccaacgt
     1021 tgccgagcaa cgctgacctc atcgccatgt ttctttgaac tgatcgaggg ctgccttcac
     1081 ctcggcagtc aagggcgcgc tgagagcttt ttcctttcca attttggcca gcagttctgg
     1141 ctttcgggta ctcaggtatt ccgtcaattt gagttgaaat tccttgaccc gttccaccgg
     1201 cacgtcatcc acataaccgt tctggaccgc ccagatcacc gacacttgtg tctcgaggcc
     1261 gatcgggctg tattgaggct gtttgaagat ttccataatg cgcttgccgc ggtcgatttg
     1321 tgcctgggtc ttcgcatcca gttcggagcc gaattgcgca aaggcagcca attcgcggaa
     1381 ttgggcgagg tcgcctttaa gctggccggc tacctgcttc atggctttaa gttgcgcagc
     1441 cgaaccgacg cgcgaaaccg acaatccgac ggagatagcc gggcgcacac cttgatagaa
     1501 caggtctgtt tccaggtaga tctgaccgtc ggtaatggag attacattcg tgggaatgta
     1561 ggcggaaacg tcaccagctt gcgtttcaat aatgggaaga gcagtaagcg aaccattccc
     1621 atatttctcg ccgacacggg ctgcccgttc gagcaatcgg ctgtgcaggt agaagacatc
     1681 gccgggatac gcttcacggc cggatggcct cttaagaacg agggagactt gccgatacgc
     1741 aactgcatgc ttggagagat cgtcatagat aatcagcgcg tccatgccgt tatccataaa
     1801 ccactcaccc atcgcagcgc ctgcgaacgg ggcgaggtac tggttggtgg cggagtccga
     1861 cgccggcgag gcgaggataa tggtgtaggg catcgctccg gcttgttcga gaacactgat
     1921 gatgcgggcg atattggatt gcttctgacc aatggcaacg tatatgcaat agaggggacg
     1981 gtaatccttg tcgccggcag cctcagccgc tttgttgaga cctgcctggc tgattattgt
     2041 gtcgatacag atcgtcgttt tgccagtcga gcgatcacca atgattaatt cgcgttggcc
     2101 gcggccgatt ggaatcatgg cgtcaatcgc catgatgccg gtttgcaccg gctgtcggac
     2161 cgggctgcga cgaatgatgc cgggtgcaag tttctcgact gggtaaaaga cgttactctc
     2221 gatcggtccc ttgccgtcca acggctctcc cagcgtgttc acaacgcgcc a
//
LOCUS       DATILV010000306         2607 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3394322, whole genome shotgun sequence.
ACCESSION   DATILV010000306 DATILV010000000
VERSION     DATILV010000306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2607
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3394322"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            267..599
                     /locus_tag="VLJ17_06990"
     CDS             267..599
                     /locus_tag="VLJ17_06990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016919812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HSV22760.1"
                     /translation="MNQSELIDKVAQATALSQAAAGQAVKAVVNAILDSLVAGEAVRV
                     SGLGTFDVAARPAREGRNPQSGETIKIAASKAARFHAGKAVKDALNPPKAAPRKKSAP
                     RKKPAVRK"
     gene            complement(814..2229)
                     /locus_tag="VLJ17_06995"
     CDS             complement(814..2229)
                     /locus_tag="VLJ17_06995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV22761.1"
                     /translation="MFERLDQTRSLTANQMRIVVAAILGDMLEFFDYFLIGFVLAFIV
                     VPWKLSFGQSAIILLSSGIGAILGAAIWGRLADRIGRRAVFIGTVLNFSIATGILALT
                     PDEGWIFLTVFRFFVGFGVGGLYCVDLPLVQEFVPASRRGFIGGLVTAFIPIGVMIGS
                     VLGAFLTPVIGWRGLFACGLVPALLALLIRAWVPESPRWLVRMGRPEEARRSLAWALK
                     VPPESLPLPQINEAATRKTPWSDLFRYPRSLLVSWLTNLGMQTTGYGVILWAPTLFVM
                     LLGVSPAEASYLFIFVSLAGFVGRFVFSGLSELIGRRASGALQGFGAAVMVVAAGLLH
                     DSFIGTVSVFWLLIIAADFFFDGGSAIMGPYAAEVWPSTLRTSGMGSAYGFGGIGKII
                     GPIGLALIVGSSNIVKPDVTIAAIVPCFLYLGAWSALAGFAYAFIGFETKGRSLEEID
                     QGLVAGRGPVTSAVEASRQSA"
     gene            complement(2259..>2607)
                     /locus_tag="VLJ17_07000"
     CDS             complement(2259..>2607)
                     /locus_tag="VLJ17_07000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22762.1"
                     /translation="VGEFVVLWLRNRWFADSPLEGAGFEPSVPLRWCDGSRPHPWYDA
                     VRRGDEINIEEGGDPNAKVASETFGRALQQFGRRALVNLIALMGNYAGTAALLTVFDM
                     QFGPDQPLPLPQL"
BASE COUNT          601 a          833 c          794 g          379 t
ORIGIN      
        1 atgcgcccgc tcgggtgacg ccaagacgcg gccacagcta aatctccggg actacgtcgc
       61 gtgcccgccc gttggcgttc gaaggtcatc cgggctgttg tgggctgttg tggatggcca
      121 cgacgcaaca gcgccgaccg cgggctcgca cccgggctaa ccgagcggaa tgtgatacaa
      181 ggggaaacgg gccaaaaaac accaatttag gccggctcgc tgaggtcggg ttctcataac
      241 attggagctg gagctggagg tcggagatga accaatccga actgatcgat aaagtcgctc
      301 aggcaactgc gctaagccaa gcggcagcag gtcaggcggt aaaggccgtg gtaaacgcca
      361 ttctcgattc cctcgtggct ggagaggcgg tccgtgtctc cggcctcggc actttcgatg
      421 tggcggcacg gcccgcccgc gaggggcgga atccacaaag cggagagacc atcaaaatcg
      481 ccgccagcaa agcagcgcgg ttccacgcag gcaaggccgt caaagatgcg ctcaatccgc
      541 cgaaagcggc cccccgcaag aagtctgcac cacgaaagaa acccgcggtg cgaaagtaaa
      601 ccaccgtctc gatgtgcggc aggaatgcac agttcgccgc cgttctgctg agcagcacgc
      661 tcctggtgaa tcgcgcttct gcatgggcgg gcgggcgcgt ctacggccgc tgcgctgcaa
      721 ttgcggtagc gtattggagc agatagcgca gattacccag caactcgaat cagcgccgca
      781 cgcggtcgga caggtacggc tgagcggctg cggtcaggcg ctctggcgcg acgcctcgac
      841 agcggacgtg accggaccgc gtccggcaac cagtccctga tcgatctctt cgagcgaccg
      901 gcccttggtc tcgaacccga taaaggcata ggcaaagccc gcgagcgccg accaggcccc
      961 gagataaagg aaacagggaa cgatcgctgc gatcgtgaca tcgggcttga cgatattcga
     1021 cgagccgacg atcagcgcga gcccgatcgg gccgataatc ttgccgatgc cgccaaaacc
     1081 ataggccgac cccatcccgc tggtccgcaa tgtggagggc cagacctccg ccgcatacgg
     1141 ccccatgatt gccgagccgc catcgaagaa gaaatcggcg gcaatgatca atagccagaa
     1201 caccgagacg gtgccgataa agctgtcgtg caacagtccg gcggcgacca ccatcaccgc
     1261 ggcgccgaac ccctggagcg cgcctgatgc acggcgcccg atcaattccg aaagcccgga
     1321 gaagacaaag cggccgacga acccggctag gctgacaaag atgaacagat aggaagcctc
     1381 ggccggagac acgccgagca gcatgacaaa caaggtcggc gcccagagaa tgacgccgta
     1441 gcccgtcgtc tgcatcccga gattggtgag ccaggacacc aggaggctgc gcggataccg
     1501 gaacagatcg ctccacggcg tcttccttgt cgccgcctcg ttaatttgcg gcagtggcaa
     1561 cgattccggg ggcaccttca gcgcccaggc aagcgagcgc cgcgcttcct cgggccggcc
     1621 catccgcact agccagcgcg gcgattccgg gacccaggca cggattaaca gggccaacaa
     1681 cgccggcacc agcccgcaag cgaacagccc ccgccaaccg atcaccggcg tcagaaaggc
     1741 gccgagaacc gagccaatca tgaccccgat cggtataaac gcggtgacca agccgccgat
     1801 aaagccccgc cgtgacgccg ggacaaattc ctgaactaac ggaagatcga cgcagtagag
     1861 cccgccgacg ccgaacccga cgaaaaagcg aaacaccgtc agaaagatcc acccctcgtc
     1921 cggggtcaac gccaggattc cggtggcaat cgagaagtta agaacggtgc caataaagac
     1981 ggctcgccgg ccgatgcggt cagccaagcg tccccatatc gccgcgccga ggatcgcgcc
     2041 gatccccgag gacagcagaa tgatcgccga ctggccaaag ctcagcttcc acggcacaac
     2101 gatgaaggcg aggacaaagc cgatcaggaa gtagtcgaag aattcaagca tatcgccgag
     2161 aatcgcggcg acgacgatcc gcatctggtt tgcagtcagt gaacgggtct ggtcgagccg
     2221 ctcgaacatt gggtcctccg cccttttgcc aaatgccgtc agagttgcgg caagggtagc
     2281 ggctgatcgg gaccgaactg catgtcgaac acggttagca gcgctgcggt cccggcatag
     2341 ttgcccatca atgcgatcaa attgaccaaa gcgcgacgac cgaactgctg cagggcgcgg
     2401 ccgaaggttt ccgatgcgac ctttgcgttc gggtcgccgc cttcctcgat attgatttcg
     2461 tcgcctcgcc ggacagcgtc gtaccatggg tgtggcctag aaccgtcgca ccatcttagc
     2521 gggaccgatg gttcgaatcc ggctccctcc agcggcgagt ctgcgaacca tcggttccgg
     2581 agccatagca caacgaattc acccaca
//
LOCUS       DATILV010000307         7707 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2631057, whole genome shotgun sequence.
ACCESSION   DATILV010000307 DATILV010000000
VERSION     DATILV010000307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7707
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2631057"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1192)
                     /locus_tag="VLJ17_07005"
     CDS             complement(<1..1192)
                     /locus_tag="VLJ17_07005"
                     /inference="COORDINATES: protein motif:HMM:NF014732.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GumC family protein"
                     /protein_id="HSV22763.1"
                     /translation="MLEMQKFPPMIDHEPSRREAAGVDDITTELASAVLRIFRRQYLI
                     LVFFLLFAVSCGVVYLRIAPPSYVAQSRILIDRGRSPFVQQQSILAEAPVDAIQLDSQ
                     VQILRSDGIALAVVKKLNLTEDPEFVASEVGLPRSIADFLSISLPTQPRTESQLTQQA
                     VAAVLANLDIKRVGITYLIDISFRSRRAERAAEIANAIADAYIADQLESKREANRRAN
                     EWLQDRLGELRRQTLEAEQKVYMYKADNNIVAAGGKLMSEQEISEINSQLVIARTKTS
                     EALARLNRIDAVLQLSVPSEALVDATVTDALSSPIIMKLRQEYLDYINKESEYSERYG
                     RGHFAVVNIRSKLRDIRVSISSELHRLAETFKSDYLIAKQREDSVEQQLAASVSQSQS
                     ASVAQ"
     gene            complement(2065..3459)
                     /locus_tag="VLJ17_07010"
     CDS             complement(2065..3459)
                     /locus_tag="VLJ17_07010"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HSV22764.1"
                     /translation="MKWVALTAILATIPVLIVWLRRNPLAAPKIGILIGVLPFLLSEF
                     HLYMAATSWEWPGYVKGIEFSVLDAVALALYFSLPPCGQRLPFQSSMMLYFCAALLSA
                     IQTEMPMSAIFYVWQLARMFLLYAVVVKASAIPRMVPAVLTGLAIGLLIEAGFGIWER
                     FGAGIHQVGGTVGNQNLLGLISHLIVFPFFALLLTRRSGRLPVAVLLAGIVIEILTAS
                     RATIGLAGLAYGVIFLLSSLRQWSGKKAVVLLIALVAVAVIVPLAQSALELRGTDALN
                     SSDDERVVFERAAAMMLSDHPMGVGANNYVLTANMGGYNFAAGVVPTLGSMSANVHNV
                     YWLVAAETGYLGLGTFLLLLLRPLTVAFICGWRSRGDQRGDLLLGLGVALLAVYIHSL
                     FEWIFVTFVAQYIYAIVVGLVVGVAQQLGFWRPVQAWKMAALAPVMSNQPARSLVQIG
                     SSLRERRPSRVTAR"
     gene            complement(3629..4852)
                     /locus_tag="VLJ17_07015"
     CDS             complement(3629..4852)
                     /locus_tag="VLJ17_07015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015665989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0043163 - cell envelope organization
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="WecB/TagA/CpsF family glycosyltransferase"
                     /protein_id="HSV22765.1"
                     /translation="MEQLMQKSSAKKERGANLGSFIVYDRRLAGSVKDEIAPDALSRQ
                     VYCVLGMPIDLVEMSAVLRAVKTAAARKVPFLISTPNLNFLVKYQIDTDFRESVLLSD
                     LCPADGISIVWIARLVGIPIKKRISGADIFDALKCQRGSENPLKVFLFGGPEGVAARA
                     AQALNDQPNGLNCVGALYPGCSSVGEMSRDEMINNINLSGADFLVAALGAKKGQLWLQ
                     HNHKRLTIPVRAHLGAVINFEAGTIRRAPRIVQTLGFEWLWRIREEPYLWRRYWNDGM
                     TLLRVLLFRIVPLALYMLWQRLKYDRNGRYLVITQTHDSESVTVSFSGPAIARHVNEA
                     IPVLRSVVGLKKRIVIEFSDTLAIDTRFLGLFLMLRKKLQGGAGPTFTGLSPRLERIF
                     CLNGLGFLLSTGKST"
     gene            complement(5198..6682)
                     /locus_tag="VLJ17_07020"
     CDS             complement(5198..6682)
                     /locus_tag="VLJ17_07020"
                     /EC_number="2.7.8.31"
                     /inference="COORDINATES: protein motif:HMM:TIGR03025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-phosphate glucose
                     phosphotransferase"
                     /protein_id="HSV22766.1"
                     /translation="MTSQPRRPIFNYQTAVTSAILPSHEVERVLRTPQQLSTVITILV
                     IQEFLVVAGSAYLASVIYHEAVLMDWPSSRLYITVALLLAAVVGAVALGFGHYQNIQS
                     QPWHAFLWSGFGTVAIAFSFLLSALFLLKVAEPYSRATFIFQFITVEVAVLSARAFFH
                     SRLQSLIANGVVNARCVVLIGDLENCAAVSGRLKATGIRTVGSYPLPGRLDGDVDGYD
                     SLRELRGLIEACRRLKPDDILLLAKQDSLTRIAGLVVSLSEVPAGIHVLLAEATDLLS
                     AARIIEFGDVVTMQVLQPPLSQIQQTAKRIFDVLASAAGLMLLSPLLALVAIAIKLDS
                     RGPVLFRQTRHGYNNETIKVFKFRSMTELEDGDNFVQAARNDTRITRVGAILRRTNID
                     ELPQLINVLRGEMSIVGPRPHATAHNEMFEGKISVFSRRHVVKPGITGWAQVNGYRGE
                     TDTLEKMQRRVEHDLYYIDNWSFWLDLRILIMTLFSRTAYTNAY"
     gene            complement(6999..7241)
                     /locus_tag="VLJ17_07025"
     CDS             complement(6999..7241)
                     /locus_tag="VLJ17_07025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018263698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HSV22767.1"
                     /translation="MNDAADAIVIDLRGLKCPLPALRTRKALSRLHDGATLVVECTDP
                     LAEIDIPNLVRETGDALEDKARHGDVLVFRIRKRGK"
     gene            7385..>7707
                     /locus_tag="VLJ17_07030"
     CDS             7385..>7707
                     /locus_tag="VLJ17_07030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22768.1"
                     /translation="MHLAPLDDVIRRITEIVHPVAPFGMRAGSAVGATLAQDAAVADL
                     HPATPLALTDGWAVHAEATADAGAYAPVTLPVLREVAVGEALRGDGDAVEPLDAVMLC
                     DGKGQ"
BASE COUNT         1876 a         2208 c         1971 g         1652 t
ORIGIN      
        1 cttgagctac gcttgccgat tgcgattgcg acactgaggc ggccagctgc tgctcgacgc
       61 tgtcctcccg ctgtttcgcg attagataat cgcttttaaa tgtttcggcg agtcgatgca
      121 attcactcga aatcgaaacc cggatatcgc gaagcttgct acgaatattc acgaccgcaa
      181 aatgacccct tccatagcgt tcagaatatt cggattcctt gttgatataa tccagatact
      241 cctgccgtag cttcataatt atcgggctgc tcaacgcatc cgtgacggtt gcgtccacca
      301 gcgcctccga ggggacactc agttggagaa cggcgtcgat tcgattgagc cgcgccaatg
      361 cctctgacgt ctttgtacga gcaataacca gctgactgtt gatctcggag atttcttgtt
      421 cgctcatcag cttgccgccg gctgcaacta tgttgttgtc ggccttatac atgtagactt
      481 tctgttcggc ttctagcgtc tggcggcgca attctccaag gcggtcttga agccactcat
      541 tggcgcgtcg atttgcttcg cgtttggatt ccagctgatc cgcgatgtag gcgtcagcta
      601 tcgcattggc gatctccgcc gcacgctctg ctcgtctcga tcgaaacgaa atatcgatca
      661 aatacgttat accaacgcgc ttgatatcaa gattcgcgag aaccgcggca actgcttgtt
      721 gagtgagctg ggattccgtt ctcggctggg tcgggaggga aatcgacaaa aagtcagcaa
      781 tcgaacgagg cagccccacc tccgatgcga caaattcagg atcttcagta aggttgagct
      841 ttttgaccac cgccagagca attccatcgg aacgcaaaat ctgaacctga ctatcgagtt
      901 gaatcgcatc gacgggagcc tcagccaaga tggattgctg ttgaacaaac ggactcctgc
      961 cccgatcgat aaggatgcgg gattgcgcca catagctggg aggcgcaatt ctcagataca
     1021 caacaccaca tgacacagca aaaagcagaa agaataccag gataagatat tgccgcctga
     1081 atatcctaag taccgcagaa gccaattcgg ttgtgatgtc atccactccg gccgcttccc
     1141 ggcgggacgg ttcatggtcg atcatcggcg gaaatttttg catttctagc atgagtcacc
     1201 gctgtccggt tgatggtggc cgtgccctcc gcgaaggtta attcggtcgg agcgtgccgg
     1261 ggaagatgag tgatcttgat cagacgcaat cgagcgccaa tttgtcccac attgccgacc
     1321 gcgcgcgcca gcaaagcgcc tggcgttggt attgcgacat ccttgccacg cggcactgat
     1381 acgtggatgg cgagcctccc gggtgctccg ccaaaggtcc cgtgtcgccc cgcacaattt
     1441 cgaacggcga gttgggtttg gccagctcat cgctggcgct tgttcagctt cggccacagc
     1501 gacactttcg acggccaaca gccgagcctg cgcgccgatc atcatcagcg ctctccaaca
     1561 cctaccatca cccccccgga tcgttgccga acgggcttgg tctccgtcga tgcatgaggt
     1621 cgcgccggtg ccatgtccgt taatctcggg gctaaagatc ccgatatcgc tcccctggcc
     1681 gccgattttg ctcacctctg caccaaatga tattaacacc acgacatgtt cccggtcaaa
     1741 taacgaagct cagggggaat ctgctatctg attgactttg ctggcgtttt tgactgacga
     1801 tgttaggcat gctctctgat aatcacatga cagtcaataa acatttatga gatttgatac
     1861 tatggtatat ccgatatccg cgcaacggag gcgcactgac gggcacccga ttgccgcatc
     1921 acattgcggg ctctcgttcc caagccgcga tatttcaaaa gcccggtagc tacaccagtg
     1981 ctaaaccacg atctctagtg caaagcgctt ctaggaataa attgaaaacc gcaatcgtgg
     2041 ctgccgcagt cctgtcgccc gacgttatcg cgctgtcacg cggctaggtc gccgctctct
     2101 gagagaactt ccgatttgaa ccagtgacct tgctggttga tttgacatca cgggcgctaa
     2161 cgcggccatt ttccaagctt ggaccggccg ccaaaagccc agctgttgcg cgacgcccac
     2221 caccaagcct accacgatcg catatatata ctgggccacg aaggtgacaa atatccattc
     2281 aaacaacgaa tgaatgtaca cggccagcag tgcgacccca agccccagca gcaaatcgcc
     2341 tctttgatct ccgcggctgc gccaaccgca gatgaaggcc acagttaggg ggcgaagcag
     2401 gagaagtaaa aaggtgccta aaccgagata gcccgtctcg gcggctacca gccagtacac
     2461 attgtgaaca ttggcactca tactccccag tgttggaacg acgccagccg cgaagttgta
     2521 tccgcccata tttgcggtca acacatagtt gttggctcca actcccatgg gatggtccga
     2581 gagcatcatc gctgccgccc tttcaaagac cactcgctcg tcatccgacg aattcaatgc
     2641 atcggttccg cggagttcca aagcggactg ggccaagggc acaattaccg caactgctac
     2701 cagggcaatt aacaaaacca ctgccttttt gccgctccac tggcgcaagc tggaaagcag
     2761 aaagataacc ccataagcga gaccagcgag cccgatggta gcacgcgacg ccgtcagtat
     2821 ttctatgacg ataccggcta gcaggactgc gacaggcagt ctcccgcttc gtcgcgtcag
     2881 cagcaaagcg aagaaaggaa agacaataag gtgcgatatc agaccaagaa gattctgatt
     2941 acctactgtt ccgccgactt gatgaatgcc cgccccaaat cgctcccaaa tcccaaatcc
     3001 cgcctctata agcagtccaa ttgccaatcc ggtcagaacc gccggcacca tgcgagggat
     3061 cgcgctcgct ttaacgacaa cagcataaag cagaaacatc cgtgcaagtt gccaaacgta
     3121 aaaaatcgcc gacattggca tctccgtttg aatagcggag agcaacgctg cacaaaaata
     3181 gagcatcatt gaagactgga acggaagccg ctgtccgcaa ggaggcaagc tgaagtagag
     3241 ggctaacgca accgcatcca aaacggagaa ttcgatgccc tttacgtagc ccggccattc
     3301 ccaggaggtg gcggccatat acagatgaaa ttcactcagc agaaagggca gaacaccaat
     3361 aagaatccca atttttggag ccgcgagagg attgcgccgc aaccatacga tgagcaccgg
     3421 tatggttgcc aaaatagcgg tcagggccac ccacttcaca acctactcct tgctcgcaaa
     3481 ttcgtgatcc tgcgagctga tcgcgttttt atctggcaca caacagctct gtgtccgcct
     3541 tgacggcacg gaatccgaag cagcccagct gcggttgaca gccactatgc ggccagcaag
     3601 ccgcgcagac acgacgtgac aacaacacct atgtgctttt gccagttgat agcaaaaatc
     3661 cgaggccatt gaggcaaaat attcgctcta accttggcga caggcctgtg aacgtcggac
     3721 ctgcgccgcc ttgaagcttt tttcgcaaca tgaggaaaag tccgagaaag cgggtatcga
     3781 tggcgagggt atcggaaaac tcaatcacaa tccgtttctt tagccctacc acactacgca
     3841 gaacaggaat cgcctcgttc acgtgccggg cgatggccgg cccggaaaag ctcaccgtaa
     3901 cggattcgct gtcgtgggtc tgcgttatca ccaagtagcg tccatttcgg tcatatttca
     3961 gccgttgcca caacatgtac aacgcaagcg gcacaatacg gaagagcagc acgcgcagca
     4021 gcgtcattcc atcattccag taacgtctcc acaggtaggg ctcctctctt atacgccaca
     4081 gccattcaaa accgagcgtt tggacgatgc gcggagcccg cctaattgta cccgcttcaa
     4141 agttgatcac cgcacctaag tgtgcccgaa ccgggatcgt taggcgtttg tgattgtgct
     4201 gcaaccacaa ttgccccttc ttggcgccta gcgcggccac cagaaagtct gcgccgctca
     4261 aattgatgtt gttgatcatc tcgtcccggc tcatctcccc gaccgaactg caaccgggat
     4321 aaagcgcccc gacacaattg agcccattag gctgatcatt cagcgcctga gctgctcgtg
     4381 cggcgacgcc ttcgggacct ccgaatagaa aaactttcaa aggattttca gagccacgtt
     4441 gacatttgag cgcgtcgaaa atatcggctc ctgaaattct tttcttgatt ggaattccga
     4501 ccagcctcgc aatccacaca atcgaaatgc cgtccgccgg acacagatcg cttaatagca
     4561 ccgattccct gaaatccgtg tcgatttgat acttcacgag gaaattgaga ttaggagtcg
     4621 atatcaaaaa tggaactttg cgggcggcgg ctgttttgac ggcgcgcaac accgccgaca
     4681 tctcaactaa atcgatcggc atacccaaga cgcaatagac ctgccgcgag agcgcgtcag
     4741 gcgcaatctc gtctttgaca gagcctgcta accttcggtc ataaactatg aacgaaccga
     4801 ggtttgctcc acgttctttt tttgcactac tcttctgcat caactgctcc aaggcctatc
     4861 ctccccacga aacagctgcc ttaaattctg cgctcaaatc gataacctgt cgaagctgcc
     4921 ctctacgtgg aagttatacc tgcgatgcag aaaacaacac aaacacgctc tcatcatagc
     4981 cttaatgata ccgatttgcc tcaaccagca actttgatcg gcgtcgaacc acagtccacg
     5041 atgctcgtta acagcatttc ccgatcagct tgcccctata ccgtcatgcc ggcagcgcct
     5101 cggagcggtg cggccttgtc attgagcgcg tcgagcaaat caaattggct gacgcaacgc
     5161 aattgtcacc aaaacatctg gacgattaac tcgcaactca ataagcgttc gtatatgcgg
     5221 tccttgaaaa taacgtcatg atcaaaattc taagatcgag ccaaaacgac caattatcaa
     5281 tgtaatatag gtcatgctcc acgcgtcgct gcatcttctc aagcgtatca gtttctccac
     5341 gatagccgtt tacctgagcc cacccggtaa ttcccggttt caccacgtgt cggcgtgaaa
     5401 acaccgaaat cttaccctca aacatctcat tgtgggcggt tgcgtgcggt cgtggaccga
     5461 caattgacat ttcgccacgg agaacattga ttaactgtgg caattcgtcg atgtttgtgc
     5521 gccgtaagat cgcgccgact ctagtgatgc gtgtgtcatt gcgggcggcc tgcacgaaat
     5581 tgtcgccgtc ctcaagctcg gtcatcgatc ggaacttgaa caccttgatt gtctcgttgt
     5641 tgtaaccgtg gcgcgtttga cggaacaaaa ccggcccacg agaatctagc ttaatggcga
     5701 ttgccaccag tgcgaggagc ggcgacaaaa gcataagtcc ggcggccgaa gccaggacat
     5761 caaatatgcg cttggcggtt tgctgaatct gggacagcgg aggttgtaac acttgcatcg
     5821 ttacgacgtc gccaaattcg atgattcttg ctgcgctgag caggtctgta gcttcggcca
     5881 acaggacatg aattcccgcc ggcacttccg acaaggagac aaccaagccg gcgattcgcg
     5941 tgaggctgtc ttgcttggcc agaagtagga tgtcatcggg tttaagacgc cgacacgctt
     6001 cgatcagccc acgaagctcg cgaagcgaat cgtatccatc gacatcccca tcaagccgac
     6061 cgggaagagg atatgagcca accgttcgta taccagtagc tttcaaccgg ccagagaccg
     6121 cggcacaatt ttccaagtcg cctatcaaaa ccacgcaccg tgcgtttacc acgccgttgg
     6181 caatcaagga ctgcaatcgc gaatgaaaaa atgcccgtgc gctcaggacc gcaacttcga
     6241 ccgtgataaa ctgaaaaata aaggtcgcgc gggagtaagg ttcggcgact ttgagaagga
     6301 acaatgcgga cagcagaaac gaaaaagcta tcgcgacagt cccgaacccg ctccaaagga
     6361 acgcgtgcca tggctgtgac tggatgttct ggtagtgccc aaatccaagc gccacggccc
     6421 ccactactgc ggccagcaag agagccacgg tgatatagag gcgtgaggat ggccaatcca
     6481 tcagtacagc ctcgtggtag atgacactcg ccagatatgc cgaacctgcc acaacgagga
     6541 attcttgaat cacgagtatc gtgatgacgg ttgatagctg ttgtggcgtg cgaaggacgc
     6601 gctctacctc atggcttgga aggatcgcgg aagttacggc cgtctgatag ttgaagatgg
     6661 gtctgcgtgg ctgcgatgtc attgcgactg cggtctgtaa tctaaacgga ctgactgaag
     6721 tgttgtattt aacataacat taacataatt ggagtgcaag tcgccaaaag ttaagaagtt
     6781 aaccggcgcg ttcgtaaacc attcacctgt ggggcggctc aacaacggag ccaacaagta
     6841 aacgggttga tgctaccaaa aattgcacgc gcagctgctg cttggcttcc ctcaaggcag
     6901 ttgggtgcgg tcgcttctaa acgagagtag gcggattctg agcgttgggg tctcgaattc
     6961 tgccggcgtt tccttgcacg ccgcatccaa aatggacgtc acttgccccg cttgcggatg
     7021 cgaaacacca gcacgtcgcc gtggcgcgcc ttatcttcga gcgcatcgcc ggtctcgcgc
     7081 accaagttgg ggatgtcaat ctcggccaac ggatccgtgc attcgaccac cagggtcgca
     7141 ccgtcgtgga ggcgcgacag cgctttgcgg gtacgtagcg ctggcagcgg gcatttgagg
     7201 ccacgcagat cgataacgat tgcatcagcg gcgtcgttca tgggacctcg gtacggtgag
     7261 cggtttcttt catcaatccg aacacatacg tgtcaagcat atccgcaccc ccgtcttgac
     7321 cgtgccactc gaccctcgcc acatacctga aatgatcacc tcactgaagc atcgccaacg
     7381 aatcatgcat ctagcaccgc tcgatgatgt catcaggcgg atcaccgaga ttgtgcatcc
     7441 ggtagccccc ttcggaatgc gggctggtag cgctgtaggg gccactttgg cgcaggatgc
     7501 cgcggtggcg gacctacatc cggccacgcc gctggctcta accgacggct gggccgtcca
     7561 tgccgaagct accgccgatg ccggagccta tgcgccagtt accctgccgg ttctgcgtga
     7621 agtggccgtc ggcgaagcac tgcgaggcga tggcgatgca gtggagccac tcgacgctgt
     7681 aatgctgtgc gacggcaagg gccagtt
//
LOCUS       DATILV010000308         2219 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2119614, whole genome shotgun sequence.
ACCESSION   DATILV010000308 DATILV010000000
VERSION     DATILV010000308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2219)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2219)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2219
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2119614"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..892
                     /locus_tag="VLJ17_07035"
     CDS             <1..892
                     /locus_tag="VLJ17_07035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008961032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HSV22769.1"
                     /translation="RVFATNVTITASVQALLVPPSHNAVIYSLATGGTISIISLFMAG
                     VVPGLLLGVSLIILCLVIAYRDGHPRGHTVPMREAVKIAIEAAWGLITLVIILGGILG
                     GIFTAVEAGAVACVWAFFVTMFIYRDYSWRDLPALVHRTLNTVAMVMTLIACASAVGY
                     IMALTQMPGKITAFFLSISSDKNVILFLINVLLLVLGCLVDMAPSILICTPILLPVMV
                     NFGVDPVHFGMIMMLNLGIGLCHPPVGSILFVGCAVGKVTIEQVMRRIWPFYGVMFAV
                     LMLVTYIPEISLWFPRWVLR"
     gene            complement(963..1883)
                     /locus_tag="VLJ17_07040"
     CDS             complement(963..1883)
                     /locus_tag="VLJ17_07040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22770.1"
                     /translation="MIGYATGGGYDDYARLLGRHIGRRIPGHPTVVVQNMPGAGSIRA
                     ANYLYNIAPKDGTVFGGFARGIFLDPLLGRAEGMRFTPATFGWLGSISNDIGVCAFRS
                     DAGIDSWADMQTKRYKIGATGAGADSDVFSNLLRRMFNLPMQLVLGYPSVPETVLAIQ
                     RKEVDGRCGWSWSTLSTRNRDLWLSKQIRVVLQLGDKRIAELAEVPTVLDVAGSTEQQ
                     AVLKLIVARQMMARPFVAPPGIPSARLTTLRNAFDATMQDPEFLADAQRQNLDVRPVT
                     GAEADALIAQVYATAPDIVKRAAEYMKEAP"
BASE COUNT          393 a          691 c          662 g          473 t
ORIGIN      
        1 ccgcgttttc gcaaccaacg tgacgatcac cgcctcggtc caggcgctgc tggtcccgcc
       61 gagccataac gccgtcatct attcgctcgc caccggcggc accatttcca tcatcagcct
      121 gttcatggct ggcgtcgtgc cgggcctgct gctcggcgtc tctcttatca ttctgtgtct
      181 tgtgatcgct tatcgcgatg gccatccccg cggccacacg gttccgatgc gcgaagccgt
      241 caagatagcg atcgaggcgg catggggcct gatcactctc gtcatcattc tcgggggcat
      301 cctgggcggc atctttacgg cggtcgaggc cggcgcagtc gcctgcgtgt gggcgttctt
      361 cgtcactatg ttcatctatc gcgactacag ctggcgcgac ctgccagcgc tcgtacaccg
      421 taccctcaac acggttgcca tggtgatgac gctgatcgct tgcgcatcgg cagtcggcta
      481 catcatggcg ctcacccaaa tgccgggcaa gatcacggca ttcttcctgt cgatctcaag
      541 tgacaagaac gtaatactgt ttctcatcaa cgtcctgctc ctggtgctcg gctgcctcgt
      601 cgacatggca ccgtcgattc tgatctgcac cccgatcctg ctgcccgtca tggtgaattt
      661 cggcgtcgac ccagtccatt tcggcatgat catgatgctc aatctcggca tcggcctgtg
      721 ccatccgccg gtcggttcaa ttctgtttgt tggctgcgcg gtcggcaagg tgacgatcga
      781 gcaagtgatg cgacgtatct ggccgtttta cggtgtcatg ttcgccgtgc tcatgctggt
      841 gacatatatc ccggaaatct cgctctggtt tccaagatgg gtattgcggt aaccgatggg
      901 gtgacgaaga cccgtcggaa gtccgttttc ccaattcacg gcgcaacaat ccgcacccta
      961 tctcacggcg cctctttcat atactccgcg gcgcgcttca cgatatccgg cgcagtcgcg
     1021 tagacttggg cgatcagcgc atcggcctcg gcgcccgtta ccggccgcac gtcgaggttc
     1081 tgtcgctggg catcggcgag gaactctgga tcctgcatgg tggcgtcgaa ggcgttgcgc
     1141 agcgttgtga ggcgggcaga cggaatgccc ggcggcgcca cgaaggggcg cgccatcatc
     1201 tggcgggcga cgatcagttt caggacggcc tgctgctcag tgcttcccgc gacatcgagc
     1261 accgtcggca cctcggcaag ctcggcaatg cgcttgtcgc cgagctgcag cacgacccgg
     1321 atctgcttcg atagccacag gtcccggttc cgggtcgaca gtgtcgacca cgaccagccg
     1381 cagcggccgt cgacctcctt gcgttgaata gccagcaccg tttcgggcac actcgggtac
     1441 cccaacacga gctgcatagg caaattgaac atcctgcgca gcaggttgga aaatacgtcg
     1501 ctgtccgctc ccgcgccggt ggcaccgatt ttatagcgct tggtttgcat atcggcccaa
     1561 gaatcgatgc cggcgtcgga acggaatgcg cagacgccga tatcgttgga gatgctgccg
     1621 agccagccga atgtcgccgg agtgaatcgc atgccttcag cacgtcccag cagcgggtcg
     1681 aggaaaatgc cgcgcgcgaa gccgccgaac accgtgccgt ccttaggcgc gatattgtag
     1741 aggtagttcg ccgctcggat actgccggcg cccggcatgt tctgcaccac caccgtggga
     1801 tggcccggga tgcggcgacc gatgtggcga ccgagcaggc gagcatagtc gtcatagccg
     1861 ccgcccgtcg catagccgat cacgagttgc acggttttgc cggcgtagaa atcggagttt
     1921 tcgtcgctgt acgccggtat tggggcgaag gttgatgcga cgatccagct ggttgtaagc
     1981 gcgacaaggt caataatgcg tcggcgtccg accatcctgg cctccttcgc cacgtcatgg
     2041 tcggctattt gtcggataga cgttggccaa aagcaatgcg tccatccccg gcggggaagg
     2101 cccgtggtcg tttccaaagc cctttttcgt cgtgcgctct ttcggagcgc ggtcagaaat
     2161 gagctaaaga acctgactga aggcccagta caacgtcgca gacaacatga tggcggccg
//
LOCUS       DATILV010000309         3449 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4674275, whole genome shotgun sequence.
ACCESSION   DATILV010000309 DATILV010000000
VERSION     DATILV010000309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3449)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3449)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3449
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4674275"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..249
                     /locus_tag="VLJ17_07045"
     CDS             <1..249
                     /locus_tag="VLJ17_07045"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV22771.1"
                     /translation="AEERYRQVLRLAPESAQIQLNLATLLGERGRYQEALEIAQKVRN
                     RRPNMMRAQSLVTEFEDILKRRDATQRQMKRTGANRPK"
     gene            complement(251..2050)
                     /locus_tag="VLJ17_07050"
     CDS             complement(251..2050)
                     /locus_tag="VLJ17_07050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011438958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium/proton antiporter"
                     /protein_id="HSV22772.1"
                     /translation="MAALDTVSLTIMFAALLMLAGILSSLVALRFGAPLLLVFLLVGM
                     LAGESGPGGIKFDDVHTTYLVGSVALALILFDGGLRTRLATFRSALAPSLALATLGVL
                     LTAALTAPVARLLLGSDWIESLLVGAVVASTDAAAVFLLIHAHGLRLRPRVGATLEIE
                     SGINDPFAIFLTIALVALMLASDQPWYAVLNELAVEAVGGVVIGLLGGRAIVIALNRL
                     ELPQGLHAPLVATGALVVFGVTQSLHGSGFLAVYLAGLTIGNRPTRAHNAVIAFLDAA
                     TWLAQIVMFVLLGLLVSPTRLVEHAVPALAVAAALMFWARPVAVFLCLAPFRFSWREK
                     AFVSWVGLRGAVGIFLASIPVLVGMRDALIFFDIGFVVVLISLLVQGWTISIAAHRLH
                     IALPRSDPAPRRVELDLPGQLEHELVGYAVGSKNPYLRRRLVPPWAKLMLVVRDQRVL
                     SAAEADGIREGDHAYFLAPPEKAQALDRFFVDMPPPAAPDLRLLGDFFVSGDVTLGTL
                     GEIYGLAIAPEDMATTLADWFATHLRHKAKVGDRLPLGAIQLVVDGIAKGRVTTVGLD
                     LAEPAEPPSRERLRTRIKLSLRHAFARLRRGLR"
     gene            complement(2269..2769)
                     /locus_tag="VLJ17_07055"
     CDS             complement(2269..2769)
                     /locus_tag="VLJ17_07055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018896783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSV22773.1"
                     /translation="MADDRDTSNSQHSDTGAASDWKAHGVKVIPGHSLDPNTAQTPGM
                     SRATAINRARAGAEKVWAGTVTIHANAKTGAHHHGDLESIIYVVKGRARMRWGEKLEF
                     TAEAGPGDFIYVPPYVPHQEINASRDEVLECVLVRSGQEPIVVNLDITPVEPPEQVLW
                     KDPIHR"
     gene            complement(2841..3440)
                     /gene="bluB"
                     /locus_tag="VLJ17_07060"
     CDS             complement(2841..3440)
                     /gene="bluB"
                     /locus_tag="VLJ17_07060"
                     /EC_number="1.13.11.79"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018458651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016722 - oxidoreductase activity, acting
                     on metal ions [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0032363 - FMN catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5,6-dimethylbenzimidazole synthase"
                     /protein_id="HSV22774.1"
                     /translation="MRDLLVWRRDVRRFRSEPLPAGTLERLIDIACLAPSVGLSQPWR
                     FIVVDDPGRRQVVRDAFKTCNADALKSYTGEKATKYASLKLAGLEEAPCQFAVFADRA
                     TSVGHSLGRRTMPEMAEYSAVTAISMMWLAARAENIGMGWVSILDPTRMNDILEVPGS
                     WRFIGYFCLGYPQNESDRPELESAGWEWRRSSQACVLHR"
BASE COUNT          780 a         1087 c         1029 g          553 t
ORIGIN      
        1 gcagaggaac gctaccggca ggtgctgcgg ctcgcacctg agagcgcaca gatccaactc
       61 aacctggcga ccttgctggg cgaacgcggt cgatatcaag aggcccttga gattgcgcag
      121 aaggttcgta accgccgtcc caacatgatg cgggcacaat cccttgtcac ggagtttgaa
      181 gacattttga aacggcgcga cgcgacccaa cgtcagatga agcgcacagg cgccaaccgc
      241 ccgaaataaa ctaccgcaag ccgcggcgca gacgagcgaa ggcgtgccgc aatgacagct
      301 tgatccgtgt acgcaaccgc tcacgagacg gtggctcggc aggctcagca agatcaagcc
      361 ccacggttgt gacccggcct ttggcgatgc cgtcgacaac gagttggatc gcgccaagcg
      421 gaaggcggtc accaaccttc gccttatggc gcaaatgggt ggcgaaccag tctgcgagcg
      481 tcgtcgccat gtcctcaggt gcaatggcga gaccataaat ttcaccgagt gtgccgagcg
      541 tcacatcacc cgaaacgaaa aaatctccca gcagacgcaa atccggcgca gcaggaggcg
      601 gcatgtcaac gaagaagcgg tccaatgcct gcgccttttc cggcggggcc aggaaatagg
      661 catggtcgcc ttcgcgaatg ccatccgcct cggcagcgga cagcacacgc tggtcgcgca
      721 ccaccagcat gagcttcgcc cacggcggga caaggcgacg gcgcagataa gggttctttg
      781 aaccgaccgc atatccgacc aactcatgct cgagctgacc gggtagatcc aactcgaccc
      841 gccgcggagc cgggtcgctg cggggtaggg caatatggag acggtgcgct gcaatcgaga
      901 ttgtccaccc ctggaccaga agcgaaatca gcaccaccac gaaaccgatg tcgaagaaaa
      961 tcaacgcatc gcgcatgccg accaacaccg ggatcgaggc gaggaaaatg ccgaccgcgc
     1021 cgcgcagccc gacccaagaa acgaatgcct tctcgcgcca ggaaaaccgg aacggcgcga
     1081 ggcacaggaa aacggcgact ggacgcgccc agaacatcag tgcggcagcg accgcaagcg
     1141 cgggcacggc atgttccaca aggcgtgtcg gtgaaaccag cagtccaagc aggacgaaca
     1201 tgacgatctg agcgagccag gtggcggcgt cgagaaacgc gatcacggcg ttatgggcac
     1261 gagtcggccg gttcccgatg gtcaatccag cgaggtacac agccagaaat cccgacccat
     1321 gcaaggactg ggtgacgccg aacacgacga gcgccccggt cgcgaccagt ggtgcgtgca
     1381 gtccttgtgg cagctccaat cggttgaggg caataacgat cgcgcgcccg ccgagcaggc
     1441 caataaccac gccgccgacc gcctccacgg caagctcgtt caaaaccgcg taccagggct
     1501 gatccgacgc caacatcaac gcgaccagcg cgatggtaag aaagattgcg aacggatcgt
     1561 tgatgccgga ttcgatttcc agggtagcgc caacgcgtgg gcgcagccgc aggccgtgcg
     1621 catgaatgag caggaacacg gcagcagcat cggtcgatgc aacaaccgct ccgaccagca
     1681 gcgactcgat ccaatcagat ccgagcagaa gccgcgcaac cggtgccgtc agcgccgccg
     1741 tgagcagcac ccccaaggtg gcgagcgcca gcgaaggcgc cagggcactg cggaacgttg
     1801 ccagccgcgt ccgcagtcca ccgtcgaaca gaatcaaggc aagcgcaacc gaaccgacca
     1861 gataggtggt atggacgtca tcgaacttga tcccaccagg cccggactcg cccgccagca
     1921 tgccgaccaa gagaaagacc agcagcaggg gggcaccgaa tcgcagcgca accaggctcg
     1981 acaagatacc ggccagcatc aggagtgccg cgaacatgat agtgaggctg acggtgtcga
     2041 gtgctgccat aagacgtgat cagccatcct ctgaatcgat gcaactccat aacgcttcga
     2101 agaccggaag atctcttaag gattgttcat gacgtggccg acgtttacca ttactgctat
     2161 cgtctggctt gagctagcga tccatcgcaa gaagaacgct gcttgcgagg cgcctcgata
     2221 ggcgggtcag cccgcgtatc gctttcaacg cgtcaaacac gctgtcgttt agcgatggat
     2281 cggatctttc cacagcacct gctcgggcgg ctcgaccggc gtgatgtcga ggttgacgac
     2341 gatgggctcc tggcctgaac gcaccagaac gcactcgagc acttcgtccc ggctggcgtt
     2401 gatttcctgg tgcggcacat acggtggcac gtagatgaaa tcccccggcc ccgcctccgc
     2461 ggtaaattcc aatttctcgc cccaccgcat ccgtgcccga cctttgacga catagatgat
     2521 gctttcaaga tcgccgtgat gatgcgcgcc ggtcttagcg ttggcatgga ttgtcaccgt
     2581 tccggcccag accttttcgg cgccggcccg cgcccggttg attgcggtcg cacgggacat
     2641 tccgggtgtc tgcgccgtgt tggggtcgag gctgtgcccg ggaatgacct tgacgccatg
     2701 ggctttccag tcggaagccg cacccgtgtc ggagtgctgt gagttcgatg tatcgcgatc
     2761 gtctgccata gtggcgcctg cgttgatgtc ctcagaacct ataaagcgca caccggccga
     2821 tgcggcaaac tttttcgatg tcaacggtgc agcacacagg cttgcgagct tcggcgccat
     2881 tcccatccgg cgctctcaag ctccggtcga tcgctctcgt tctgcgggta gccgagacaa
     2941 aagtacccga taaaacgcca agaacccggg acctcgagaa tgtcgttcat gcgcgtcggg
     3001 tcgagaatcg aaacccaacc catgccaatg ttctcggcgc gtgccgccag ccacatcatc
     3061 gagattgccg tcacagctga atattcggcc atttccggca tcgtcctgcg cccgagacta
     3121 tgtccgaccg atgtagcacg gtccgcaaat accgcgaatt ggcaaggcgc ttcctcaagc
     3181 cctgccaatt tgagcgaggc atatttggtg gccttttcgc ccgtatagga tttgagcgca
     3241 tccgcgttac aggtcttgaa cgcgtcgcga acgacctggc ggcgaccggg atcgtcgacc
     3301 acgatgaacc gccacggctg gctcaaaccc acggatggcg cgaggcacgc gatgtcgatc
     3361 aagcgctcca gcgtgcccgc gggcagcggc tcggatcgaa accgcctgac atcgcgccgc
     3421 cacaccagca ggtcgcgcag acgtaaacg
//
LOCUS       DATILV010000310         2564 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4929110, whole genome shotgun sequence.
ACCESSION   DATILV010000310 DATILV010000000
VERSION     DATILV010000310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2564
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4929110"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..312)
                     /locus_tag="VLJ17_07065"
     CDS             complement(<1..312)
                     /locus_tag="VLJ17_07065"
                     /inference="COORDINATES: protein motif:HMM:NF024912.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthetase B"
                     /protein_id="HSV22775.1"
                     /translation="MCGINGIFAFHRASGEPKEVELISTRDAMRARGPDGAGSWWSSD
                     RHCGLGHRRLSIIDLSDRASQPMTSDDGRLVIVFNGEIYNYPELRVELEADGAHFRTT
                     SD"
     gene            complement(1037..>2564)
                     /locus_tag="VLJ17_07070"
     CDS             complement(1037..>2564)
                     /locus_tag="VLJ17_07070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22776.1"
                     /translation="SYDATINHPSWCAFAPYFNNGCVNAPNGIHPDQHAIAINPGNPT
                     QIFEGSDGGVIRTSGAFADVSSQCDEPHRNGGGPLPTTSGNYKACKRLLSRVPTLIEH
                     VDKKLSSTLQFINVAINPSDSRRVLGGTQDNGTWANLGPSATNAFSQVIYGDGGNAVF
                     DATNPTWLANEFTGGFGDANFENGDPTKWVIATGPMVASGEAVGFYWPQIGDPNPVPG
                     THPIYNGAQHVWRSWAFGAGTPGQVPQDTTPKVAAYEANCPEFVTDGATPTCGDYLPL
                     GGPAGSNQPGDLTGSVYGSDRTGGSMSWLARDSADHGTLWAATSAGRIFVTHNADALD
                     PASVTWHRIDSSTSGNSPTRFPSGISVDPADPGHAWVSYSGYNAATPATPGHVFEVKE
                     NGSLPGSGLFTNLDIEAGTAAFPTPTDNGDLPASDVVRDDSTKTLYVSTDFGVLRGDA
                     DGTGGWHVTAGMPRYEVMHLEIQPSSRVPTCMGGAAGCQHVLFAATHSRAIWQMQLGK
                     "
BASE COUNT          513 a          766 c          806 g          479 t
ORIGIN      
        1 atccgaagtt gtgcggaaat gcgcaccatc cgcctcaagc tcgacgcgca gttccgggta
       61 attgtagatc tctccgttaa aaacgatgac gagacggcca tcatcacttg tcatcggttg
      121 agatgcgcgg tcggacagat caataatgga gaggcggcgg tgcccgagcc cgcaatgccg
      181 gtcgctactc caccatgagc ctgcgccgtc cggaccacgg gcgcgcattg catcccgggt
      241 agagatgagc tccacctctt tgggctcacc agaagcccta tgaaacgcga aaataccgtt
      301 tatgccgcac atggatggct accagacaaa aacaagcggg tgcgatgcag gagtgggctc
      361 gaggtgagga acgctcttgc tgcgaagcgg tgaactaata ccatcgcagg aatagcgaaa
      421 tggtgaagaa atggagatgt caggaattac ggaggtccac gcagatccgg cgcaagataa
      481 gctaccgccc tctgccacac agaatcgtgg attttcggaa agaggagatt aatccccgag
      541 gccaacgtgt gtcaaattat ggccgcggtg aggccgttga gaacctaaag tggctctcgt
      601 tagcccatca gagaacaaga aaatgaacaa gaaaatcaca ttgttaagcg gaagcactac
      661 ccaaagcgac tcgcgcttgt cccagatact agcatctaaa ttgccaccat ttcgcaaacg
      721 acgctctcgc agggtccgac tcgcagcaag ctcgccagca tcaaccggcg gagactccat
      781 ggatatcttc aggaagggac aagttctcgg ctaattttgc acccgctcca tgcaagactc
      841 agccgcaaac aagggcgcga cgaattcctt ttcgacaatc accgagacgg atcgctgcag
      901 tagggtcacg gaaacgacaa ggtgatattc accttggccg agcgagacaa aaaagcccca
      961 actcggacgt tggggcttag ccttttgcgc ctattttccc gaacgcggca ctctttgccg
     1021 gcaaaagcgc tgcggattac ttgccgagct gcatctgcca gatagccctc gagtgcgtcg
     1081 ctgcgaaaag cacatgctgg cagcccgccg ctccccccat gcacgtaggt acgcgcgagg
     1141 atggctggat ttcgaggtgc atgacctcgt acctaggcat cccagcggtc acgtgccagc
     1201 ctcccgtccc gtcggcgtcg ccgcggagca cgccgaagtc cgtcgacacg tagagcgtct
     1261 tggtcgagtc gtcgcgaacg acatcgctgg ccggcaggtc cccattatcg gtcggcgtcg
     1321 ggaaggcggc tgtgccggcc tcgatgtcga gattggtgaa gaggccggaa ccaggcagcg
     1381 agccgttctc cttgacttcg aacacatggc ccggcgtggc cggcgtggcg gcgttgtagc
     1441 ccgagtagga gacccacgcg tggcccggat cggccggatc gacggagatg ccgctcggga
     1501 aacgtgtcgg cgagttgccc gacgtcgagc tgtcgatccg gtgccatgtc acgctggccg
     1561 gatcgagcgc gtcggcattg tgcgtgacga aaatccgtcc cgctgatgtc gccgcccaca
     1621 acgtgccgtg gtcggccgaa tcgcgggcga gccacgacat cgagccgccc gttcggtcgc
     1681 tgccgtagac cgacccggtg aggtctcccg gctggttgct tccggccggc ccaccgagcg
     1741 ggaggtagtc gccgcacgtc ggcgtcgcgc cgtcggtgac gaactcgggg cagtttgcct
     1801 cgtaggcggc gaccttcggc gtggtgtcct gcggaacctg gcccggcgtt ccggccccga
     1861 aagcccaact gcgccagacg tgttgggccc cgttgtagat cgggtgagtg ccggggaccg
     1921 ggttcgggtc gccgatctgc ggccaataga aaccaaccgc ctcgccactg gcaaccatcg
     1981 ggccagttgc gatgacccac ttggttggat cgccgttctc gaagttggcg tcgccgaagc
     2041 cccccgtgaa ctcgttcgct agccaggtcg ggtttgtcgc gtcgaagaca gcgttgccgc
     2101 catccccata gatgacctgg ctgaaggcgt tggtcgccga tggaccaagg ttggcccagg
     2161 tgccgttgtc ctgcgtcccg cccaagaccc ggcgcgagtc cgacggattg atcgccacgt
     2221 tgatgaactg gagcgtgctg ctgagctttt tgtcgacgtg ctcgatcaga gtcggaacgc
     2281 gtgacagcaa ccgtttgcag gctttgtagt tgccagacgt cgtcggcagc gggcctccgc
     2341 cattgcggtg cggctcgtcg cactgcgagg agacgtcagc gaaagctccg ctcgtgcgga
     2401 tcacgccgcc gtccgaccct tcaaagatct gcgtcgggtt gccggggttg atggcgatcg
     2461 cgtgctggtc cgggtggatc ccgttcggtg cgttgacgca gccgttattg aaatatgggg
     2521 cgaaggcgca ccagctcgga tgattgatcg tcgcgtcgta ggat
//
LOCUS       DATILV010000311         4505 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_844378, whole genome shotgun sequence.
ACCESSION   DATILV010000311 DATILV010000000
VERSION     DATILV010000311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4505
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_844378"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..703
                     /locus_tag="VLJ17_07075"
     CDS             <1..703
                     /locus_tag="VLJ17_07075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008965842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ethylbenzene dehydrogenase-related protein"
                     /protein_id="HSV22777.1"
                     /translation="LAGDRTFHASPHPIPGAPTTMTGRGLHFTMDGYADVWQWKATSG
                     STGWMDDAHFGPPLEPTPMQARNVVPYRGGFAPDPGVANYMDNFVIDSDATGGARLVA
                     PRRLPKNLAATVAALGEVDLDPNRGEEDGTRWYMTESESIPYSAEADALIPTGTVIPG
                     VIIAGEFSGDRADVRCAARWASGHWALEVARRLDTHSGYDVPIKTGVFIRVAAFDHSQ
                     IRHTRHVRPIRLEVE"
     gene            784..855
                     /locus_tag="VLJ17_07080"
                     /pseudo
     CDS             784..855
                     /locus_tag="VLJ17_07080"
                     /inference="COORDINATES: protein motif:HMM:NF012339.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
     gene            1023..1193
                     /locus_tag="VLJ17_07085"
                     /pseudo
     CDS             1023..1193
                     /locus_tag="VLJ17_07085"
                     /inference="COORDINATES: protein motif:HMM:NF013161.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-NAD reductase"
     gene            1230..1733
                     /locus_tag="VLJ17_07090"
     CDS             1230..1733
                     /locus_tag="VLJ17_07090"
                     /inference="COORDINATES: protein motif:HMM:NF012402.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22778.1"
                     /translation="MTGPFGSAFLRPNHAGSIVLASSGTGFAPMWSVAVGAIMERPQR
                     ELIFVVAAQKLQSLYMHAALCRLALFPNVTIIPIVSEPQSVSPAIRAGRPADHLPVLS
                     PSDVVYAAGSPAMTERVARIARAAGAKCYTDPFTTNAKSTEQERFVQRVTGWLNQPGR
                     NFQTVAS"
     gene            1777..1956
                     /locus_tag="VLJ17_07095"
     CDS             1777..1956
                     /locus_tag="VLJ17_07095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22779.1"
                     /translation="MSMPDRTKPLIYIERARETHVIHFVLGDIELVGLILTRTSENAA
                     VIDYFYQKLKDGLYI"
     gene            complement(2212..2481)
                     /locus_tag="VLJ17_07100"
     CDS             complement(2212..2481)
                     /locus_tag="VLJ17_07100"
                     /inference="COORDINATES: protein motif:HMM:NF022603.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2934 domain-containing protein"
                     /protein_id="HSV22780.1"
                     /translation="MSNLEEAIRERAYHLWIADGQPEGKADIHWLNAQREILATSVES
                     LASTAAATKPNKRASCGRKSKTAAAYSMRARLGRPRKKRATETRC"
     gene            complement(2802..>4505)
                     /locus_tag="VLJ17_07105"
     CDS             complement(2802..>4505)
                     /locus_tag="VLJ17_07105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV22781.1"
                     /translation="LSISVSMPPLALAAAIATRQKTEAHLLSLQVQLKRQIERKNAVL
                     ESVKRHFQFLIDGVVDYAIFALDKEGHVTSWNSGAQKIMGYAPEEIVGKHFGIFYRPD
                     ERRAGTPAHALEFAIQKGKHELEGWRIRKNGTLFFVTGSVSSYRDDSGNLGGFINVLR
                     DTTERRDAEEKLVQAREQLAMSQKMEAIGKLTGGIAHDFNNLLMIIGGSAQIFARLLD
                     PKLPKAIEAIQTAAKRGETLTRQLLTFSRHQHLSPTVVDLNAAMKNMRTMIESSLRGN
                     IVYNENLGDGVWPVRVDLAELELAIVNIAVNARDAMPNGGTFTLSVNDVTIDQAIGDN
                     RLRGVFFAVAFNDTGTGIPPNLMSKMFDPFFTTKEVGKGTGLGLSQVYGFAHQAGGTV
                     TADSKVGQGTTITVYLPYCADEQITGPAGKTKVLNPQRQTVLVVDDNVDVAEVTSSLF
                     ENLGYETIYRDSAEAALKLLEAGTKIDLVFSDIVMPGTIDGVGLAREIGSRYPNLPVA
                     LTTGYSDAAIAAPPNLRILRKPFDADALKDLIRDITPPKLVKTSAVLPASGTAGALHK
                     T"
BASE COUNT          927 a         1280 c         1276 g         1022 t
ORIGIN      
        1 ccttgccggc gatcgaacgt ttcatgccag cccacatccg attcccggtg cgccgacgac
       61 gatgaccggc cgcggcctgc atttcacgat ggatggttat gccgatgttt ggcagtggaa
      121 ggcgaccagc ggttctactg gatggatgga cgacgctcat ttcggtccgc ccttggaacc
      181 gacgcccatg caagcgcgca acgtcgtccc gtataggggc ggtttcgcgc ccgaccccgg
      241 ggtcgctaac tacatggata attttgtcat cgactccgat gccaccggcg gtgcgcggct
      301 cgtcgcgccg cggaggctac ccaaaaacct tgcagcaacg gtcgcagcgc tcggagaagt
      361 ggatcttgat ccaaaccgtg gcgaggagga tggcacgcgc tggtatatga ccgaatcgga
      421 gtcgattccg tattcagcag aggcggacgc cttgattccg acaggcacgg taattccggg
      481 cgtcatcatc gccggcgaat tttcaggcga tcgtgctgac gtgcgatgcg ccgcccgctg
      541 ggcctctggc cactgggcgc tggaagtcgc gcgacgtctc gacacccaca gtggctacga
      601 cgttccgatc aagaccggcg ttttcatacg ggttgcggct ttcgatcaca gtcagatcag
      661 acatacgagg cacgtgcggc cgatccgcct tgaggttgag tgatgaggaa gatttgcaag
      721 gttatgctga acgacgagtc gtttccggct tattgcggcg acttgctact cgatgcggca
      781 ctgatgaaca gcatcgactt gccgcatgac tgccggagcg ggatttgcgg cgcctgccgg
      841 gtgcggctcg tcaaaggacg ggtctttggc ggtcaagaag acggcgacga gatgatcaat
      901 gcctgccagg cgcggatcat ttccgacatc gaggttgtaa ccgaaccggt tcccgaccag
      961 gtctccattt cggctcgagt ggctgccatc gttcggctcg ccccagagtt gttggcgtgg
     1021 atgtggaagt atcaaagctg cttcggtacc ttcccggtca gttctgcaag ttacaattcc
     1081 acggatttcc gccgagattt tatagcccca cctatccact ggaggcacgg cccaacaatc
     1141 ggctggtgca cttccacatc cgaaggtttt ccgacggagt cgtatcttcc gaactgggac
     1201 ggggtatccg tgtcggacac cgcgtaaggt tgaccgggcc gttcgggagc gcctttctca
     1261 ggccaaatca tgccggcagc attgtccttg cctccagcgg caccggtttc gcgccgatgt
     1321 ggtcggtcgc ggtcggagcg atcatggaac ggccgcagcg cgaattgatc ttcgtggtcg
     1381 cggcgcaaaa acttcaatcg ctttatatgc atgctgcgct atgtcgtctg gcgttatttc
     1441 ctaacgtcac catcattccg attgtttcgg agccgcagag cgtctcgccc gccattcgcg
     1501 ccggtcggcc cgccgatcat ttgccggttc tgtcgccgag cgatgtcgtc tacgccgccg
     1561 gctcgcccgc catgacggag cgcgtggcgc ggattgcgag ggcggccggt gccaaatgct
     1621 atacggaccc gttcactacg aacgccaaat ctaccgaaca agagagattt gtgcagcgcg
     1681 tgaccggatg gctcaatcaa cccggcagga atttccaaac agtcgcatcc tgatgatcga
     1741 ttgcgccacc ctgattaacc gcaaggagat ttgtccatga gcatgccaga tcgcaccaag
     1801 ccgctgatct acattgagcg cgcacgcgag acccacgtga ttcattttgt actcggagat
     1861 atagagttgg ttggcttgat ccttacccgg acatccgaga atgcagcagt catcgactac
     1921 ttctatcaaa agcttaagga cggtctgtat atctaaaggg ggaccctcgg ccgaatatca
     1981 aatgcgtatc ccgaacagca ggcaacaaca tgcatcgcac actgagctct ctgcgctgcc
     2041 atgagcgcga tcgcgacagc cgccttgtct cggctttcgc tcggaggagt gtacccagtt
     2101 ggtctgttgc gcgttgattg acggccatgg caacagcggc aggcggcccg taggccatta
     2161 acgtcgcgat cgccaagcag cggcggttaa agctagagac aagagcagcc actaacagcg
     2221 ggtttcggtc gcgcgctttt tacggggacg gccaagtcga gctcgcatgg aataggcagc
     2281 ggcagttttg ctttttcgac cgcagcttgc tcttttgtta ggtttcgtcg cggcagcggt
     2341 actggccaag ctttcgactg acgttgcgag aatttcgcgt tgagcattca gccaatggat
     2401 gtccgccttg ccctcgggtt ggccatcggc gatccagagg tggtaggcac gctcgcgaat
     2461 tgcttcttcc agattagaca tgggattccc ctcaacaatg agacgacagc cccggcgcaa
     2521 aactcttgct cccgcaaggt taatgaaatc ttaaggcgcg gccggacgtg cagcgagggc
     2581 agaagaagcc agtcgttgcg cctgaaccgc gccacatcaa aacccacagt tggtcaaagg
     2641 cagaaatcaa agtactaaac tgcgccaaag atggtggacg cttagtgggt tacaaatgaa
     2701 agtggccccg gcgctgtgac gaacggagcc actctccccg caagcgcagc cgcttgaaga
     2761 catgcttacc ttgcggattt aacgcaagcc gccaaggtcg atcaagtttt gtgcaacgcg
     2821 cccgccgtgc cagaggccgg cagcacagct gatgttttca cgagcttcgg aggcgttata
     2881 tcccggatca aatcctttag cgcatcggca tcgaacggct tgcgtagtat tcttaaattg
     2941 ggcggcgctg ctattgcagc atcgctgtaa ccggtcgtaa gggctaccgg caaatttgga
     3001 taccgcgatc cgatttctct cgcaagcccg accccgtcaa tggtccctgg catgacgata
     3061 tcgctgaaca cgaggtcaat cttcgtgccg gcttcgagca gtttcaacgc tgcttcggcc
     3121 gaatcacggt agatggtttc atagccaaga ttttcgaaca gcgaagaagt gacctccgcc
     3181 acatcaacgt tgtcgtcgac aacgaggacg gtttgccgtt gcggatttag tacctttgtt
     3241 ttgccagcgg ggcccgtgat ttgctcgtcc gcacaatacg gcagatagac tgtaatcgtt
     3301 gttccctgtc cgaccttgct gtcggccgtc accgttccac ccgcttggtg cgcaaaaccg
     3361 taaacctgcg ataaaccaag cccagttcct ttgcccacct ccttcgtcgt gaagaatgga
     3421 tcgaacattt tggacatgag atttggcgga ataccggtgc ccgtgtcgtt aaacgctacc
     3481 gcaaagaaga ctcccctgag gcgattatcg ccgattgcct gatctatcgt cacatcgttg
     3541 acagacagcg tgaacgtgcc gccgttcggc attgcgtcgc gcgcattcac ggcgatgttg
     3601 acgatcgcaa gttctaattc ggcgaggtcc actctaaccg gccaaacgcc gtcgccaaga
     3661 ttttcgttgt atacaatgtt cccgcgcagc gagctttcga tcatggtgcg catgttcttc
     3721 atggcagcat tcagatcaac gaccgtcggg ctgaggtgct gatgacgcga gaacgtcaag
     3781 agctggcgcg tcagggtttc gccgcgtttc gccgcggtct gtatggcttc gattgctttt
     3841 ggcagtttcg gatcaagcaa gcgtgcaaag atctgagcgc tgcctccaat aatcatcaat
     3901 agattgttga agtcgtgcgc tatcccgcca gtcagtttgc cgattgcctc cattttttgc
     3961 gacattgcga gctgttcgcg cgcctggacc agtttctcct cagcgtcgcg ccgctccgtt
     4021 gtgtcccgga gaacattgat aaagccgccc agatttcctg aatcatcacg gtacgaagaa
     4081 accgatccgg tgacaaaaaa cagcgtgcca tttttcctga tgcgccagcc ctcaagctcg
     4141 tgctttcctt tttggattgc gaactccaat gcgtgggctg gtgtgccagc tcggcgctca
     4201 tctggccgat aaaatattcc gaagtgcttg ccgacaattt cttccggggc atagcccatg
     4261 attttttgtg cgccgctatt ccagcttgta acgtggcctt ccttatcaag cgcaaagatg
     4321 gcgtagtcga caacgccgtc gataagaaat tggaagtggc gcttaacgct ttcgaggaca
     4381 gcgtttttgc gctcaatctg acgtttcaat tgaacctgca gcgaaagcaa atgggcttcc
     4441 gttttttgac gtgtcgcgat tgctgcagct agcgccaggg gcggcatcga tacgctgatc
     4501 gaaag
//
LOCUS       DATILV010000312         4331 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4929424, whole genome shotgun sequence.
ACCESSION   DATILV010000312 DATILV010000000
VERSION     DATILV010000312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4331)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4331)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4331
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4929424"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..314
                     /locus_tag="VLJ17_07110"
     CDS             <1..314
                     /locus_tag="VLJ17_07110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019863856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HSV22782.1"
                     /translation="LTLAVQAEGREVTTVEALAAPDGTLNGLQQAFQQHHALQCGFCT
                     PGILMSFTDYLARNPHPTEDEIREVLSGHLCRCTGYAGIVAAVLAVSRGNHNPSSRSQ
                     S"
     gene            311..781
                     /locus_tag="VLJ17_07115"
     CDS             311..781
                     /locus_tag="VLJ17_07115"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSV22783.1"
                     /translation="MTKGTFQERVTIDGKNVVLAHDEPPVINAGVLENADIFRMINIF
                     ADKFSPTNIDDADGTPLRLYTSDKVKIDVSKRRKHDMGFWHRNIDAHEIIFCVKGALK
                     WETEMGVKIMHPGDMLLIPKGIGHRSMLCEDSTADNVLIELKIADELTYVGEKS"
     gene            930..2327
                     /locus_tag="VLJ17_07120"
     CDS             930..2327
                     /locus_tag="VLJ17_07120"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV22784.1"
                     /translation="MQSVDLIIADIAWLITMDPRRRVIRDATIAVDGGKIVAVGKSAD
                     VTARYTARQKVDGRSAVATPGFVDCHLHSSFQLSRGLADEANAQSFLFDRMYPYEAAL
                     EGEDVRVSATLAATELLRHGVTCFVDPGNYHPEASVEGVMATGIRMIVSRSSFDLTKS
                     VLGILPARMIETTAVAMERAEAVLERYAKSGNPRLGASASFRGLNNASDELITGLKKL
                     ADHYGTLLQTHACFSYSTHDSSVARTGLAEIERLESLGVVDERMLIVHSGWLEPQEVA
                     ILARRRPSLVCAPSSSLHNGYGNFLFGKLPELFALGVNVAVGSDHASSGIVDMAQEIR
                     LACCCYKEIRINPRVMPPETGLEMATINGAKAALMSDRIGSIEVGKEADIVLFDTNRP
                     EWQPLINPVSNLVYGATGDSVRDVFVMGEQVVAGGQVAKIDEAKLFAEVPVAVGRLKK
                     HLKFDQMVQLKWPVE"
     gene            2397..3965
                     /locus_tag="VLJ17_07125"
     CDS             2397..3965
                     /locus_tag="VLJ17_07125"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate-forming enzyme family protein"
                     /protein_id="HSV22785.1"
                     /translation="MTGVFGDHVPGIPYRPVAELFAQYRERDPAKTAIVDLDSNSAIA
                     FGELDRITTDIAALLKSRGVTKGSRVLLLSDESLEKLLLWFGIWRLGAVVCPLNIEIN
                     EKVLADLAPVVNPMLVLWHKELNIDALVGECGAPRIRFGAWSASGASDPQDELFTHLL
                     KDDAAEFPERNAPEDIACIFCTSGTTNRPKIVVYDHCAYWLNGLSALEFLGLTEDDRT
                     LEYRSFGWNSAQVLSLMPFLEKGLTLHIAKRFSHSHFFEWIQHYGITFAAGVPTVLNM
                     LLSKPLGYAAKDLPTLRLMSCSSAPLTAQQWLQFEEIYGIKLLQMYGMSEAGWVCGNR
                     TYKNRIGTVGVPALHQEFAIVDADGKPCPPGVEGEVTAGGPHTAIGYLLDDGTIQPIR
                     PNRIKTGDLAIEDADGFIRVTGRTKDLIIRGGINIAPVEIDEVLFKHPGILEAAAVGV
                     PDKIYGEEVICYAVAKPGFSLTEASVRQHCEVFLPRQKMPKQIFIVPALPKSDRGKVL
                     RDRLREDWTARMKV"
     gene            3985..>4331
                     /locus_tag="VLJ17_07130"
     CDS             3985..>4331
                     /locus_tag="VLJ17_07130"
                     /inference="COORDINATES: protein motif:HMM:NF045191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22786.1"
                     /translation="MDAMTRLKRRPMPNPSAAPSRSYPDLHDHIRALDKAGLLVTVDR
                     PINKDTEMHPLVRWQFRGGIEEKDRKAFLFTNVVDSKKRKYNIPVAVGVLAANREIYR
                     IGIGCRLEEIDER"
BASE COUNT          873 a         1323 c         1311 g          824 t
ORIGIN      
        1 gcctaacact tgctgtgcag gccgagggcc gcgaggtcac gacggtcgaa gcgctggcgg
       61 cgccggacgg cacgctcaat gggctgcaac aggcgttcca acagcatcat gccctgcaat
      121 gcggtttctg cacacccggc atcttgatgt cgttcacgga ttatcttgcg agaaatccac
      181 atccgaccga ggatgaaatc cgcgaagtgc tgagcggtca tctgtgtcgg tgcacgggct
      241 atgccggcat cgtggccgcg gtgctcgccg tatcgcgggg caaccataat ccatcgagcc
      301 ggagccaatc atgactaaag ggacttttca ggagcgggtg acgatcgacg gcaagaatgt
      361 cgtgctcgcc cacgacgaac cgccggtgat caatgcaggc gtgctggaga acgccgacat
      421 cttccggatg atcaatatct ttgccgacaa gtttagcccc accaatattg acgatgccga
      481 cggaacgccg ctgcgacttt acacgtcgga caaggtcaag atcgatgtct ccaagcggcg
      541 caagcacgac atgggcttct ggcaccgcaa catcgacgcc cacgagatca ttttctgcgt
      601 caagggcgcc ctgaagtggg aaaccgaaat gggcgtcaag atcatgcatc ccggcgacat
      661 gctgttgatc cccaagggca tcggacaccg ctcaatgctg tgcgaggatt ccaccgccga
      721 caacgtgctg atcgaactca agatcgccga tgaacttacc tatgtggggg agaaatcgta
      781 gcccggatga aggggccgtt cttccggccc cttcatccgg ggacacgggc tcggcgcgcc
      841 tgagctgcgc gtgcggaacc gaagtccctg gatgaaggcc gccgaagcgg tgctccatcc
      901 aggttacggg acacgaacga ggagcacccg tgcaatccgt cgacctcatc atcgccgata
      961 ttgcctggct gatcaccatg gacccgcgcc gccgcgtcat tcgcgacgcg acaatcgcgg
     1021 ttgatggcgg caagatcgtt gcggtcggta agtcggctga cgtcactgcg cgttacaccg
     1081 ccaggcaaaa agtcgatggt cgttctgctg ttgcgacccc gggtttcgtc gattgccatt
     1141 tgcattcttc tttccagcta tcgcgcggcc tcgctgacga agcgaacgcc cagtcgtttc
     1201 tgttcgaccg catgtacccc tatgaagccg cgcttgaagg cgaagacgtg cgggtgtccg
     1261 cgacgctggc ggcgaccgag ctgttgcggc acggcgttac ctgcttcgtc gatcccggca
     1321 actatcatcc ggaggcgtct gtcgaggggg tgatggcaac cgggatccgg atgatcgtat
     1381 cgcgttcctc gttcgacttg accaaatctg tgcttggcat tctgcccgcg cgcatgatcg
     1441 agaccaccgc cgtcgccatg gagcgcgccg aggcggtgct cgaacgctac gccaaatcgg
     1501 gaaatccgcg gctcggcgcc agcgcctcgt tccgcggcct caacaacgcc tcggacgagc
     1561 ttatcaccgg cctgaaaaag ctcgccgacc actacggcac gctgctgcaa acccacgcat
     1621 gcttctccta ttcgacccac gattcgagcg tcgcccgcac cggactcgcc gagatcgagc
     1681 ggctggaatc cctcggcgtt gtcgacgaac gcatgttgat cgtgcattcg ggctggctgg
     1741 agccccaaga ggttgcaatc ctggcgcggc gtaggccttc cctggtgtgc gcgccgagtt
     1801 cgagcttgca caacggctac ggcaatttcc tgttcggtaa gctgcccgag ctttttgcgc
     1861 tcggtgtcaa cgtggcggtc ggctctgatc acgcaagctc gggcatcgtc gacatggccc
     1921 aggaaattcg cctcgcctgt tgctgctata aggagatcag gatcaatccg cgcgtcatgc
     1981 cgcccgagac cggccttgaa atggcaacca tcaatggtgc caaggcggcc ctgatgagcg
     2041 accgcatcgg cagcatcgag gtcggcaagg aggctgacat cgtgctgttc gacaccaacc
     2101 ggcccgaatg gcagccgctg atcaatccgg tgtcgaacct tgtttatggc gcaactggtg
     2161 attcggtgcg cgacgtgttc gtgatgggcg agcaggtcgt ggccggcgga caggtggcca
     2221 agatcgacga ggccaaattg tttgccgagg ttccggtcgc ggtcggccgt ctcaagaagc
     2281 acctcaaatt tgaccagatg gttcaactca aatggccggt ggagtgacct gtcgacgctc
     2341 tcgcccaaaa gcgggctgag gtgaacaggc accacgattc aggcgcgagg cccatcatga
     2401 ctggcgtatt cggtgaccat gttcctggaa tcccgtatcg cccagttgca gaactattcg
     2461 cacaataccg cgaacgcgat ccggccaaga ccgcgattgt cgacctcgat tccaattctg
     2521 ctatcgcgtt cggtgaactc gatcggataa cgaccgacat tgcggcgctg ctcaagagcc
     2581 gcggcgtcac aaagggcagc cgggtgttgc tgctgtcgga cgaaagcctg gaaaagctgc
     2641 tattgtggtt cggcatctgg cgtctcggcg cggtggtatg cccgctcaac atcgagatca
     2701 acgagaaggt gctggccgat cttgcccccg tcgtgaatcc gatgctggtg ctctggcaca
     2761 aggagctcaa tattgatgcc ctagtggggg aatgcggagc gccgcgcatt cggttcggag
     2821 cgtggtcggc aagcggtgcc agcgacccgc aagacgaatt gttcacacat ctgttgaagg
     2881 acgatgccgc cgaattccct gagcgcaacg cgcctgaaga catcgcgtgc atcttctgca
     2941 cctccggaac caccaaccgg cccaagatcg tggtctacga ccactgtgcc tactggctca
     3001 atggcctgtc cgcccttgag ttcctcggcc tcaccgagga tgatcgtacc ctggaatatc
     3061 gctcctttgg ctggaactct gcccaggtgc tgagcctgat gccgttcctg gagaaggggt
     3121 tgaccttgca catcgccaaa cgcttctccc acagccactt cttcgagtgg atacagcact
     3181 acggcatcac cttcgcggcc ggcgtgccaa ctgtgctcaa catgctgttg agcaagccgc
     3241 tcggctatgc cgcaaaggac ctgccgacgt tgcggctgat gagctgctcg tccgcgccgc
     3301 tgacggccca gcaatggctg cagttcgaag agatttacgg catcaaactc ctacagatgt
     3361 acggcatgtc ggaagctggc tgggtgtgcg gcaaccgcac ctacaagaac cgcatcggca
     3421 cggtcggcgt tccggccctg caccaggagt ttgccatcgt cgatgcggac ggcaagccgt
     3481 gcccgccagg ggtcgaaggc gaggtcaccg cagggggccc gcatacggcg attggctatc
     3541 ttctggacga cggaacgatc cagcctatac gtcccaaccg catcaagacc ggtgacctcg
     3601 ccatcgagga cgcggacggg tttattcgcg ttaccggtcg caccaaggat ttgatcatcc
     3661 ggggcggcat aaacatcgcg cccgtggaga tcgacgaggt cttgttcaag caccccggaa
     3721 ttcttgaggc cgcggcagtg ggcgtgccgg ataaaatcta cggcgaggaa gtgatatgct
     3781 acgccgtcgc caagccgggc ttcagcctca ccgaagcctc ggtgcgtcag cattgcgagg
     3841 tcttcttgcc gcggcaaaaa atgccgaagc agattttcat cgtgccggct cttcccaaga
     3901 gcgatcgcgg caaggtcttg cgtgaccgcc tacgggaaga ttggaccgcc cgcatgaagg
     3961 tgtgacgaag cgcggggatt tatcatggat gcaatgacca ggctcaagcg cagaccgatg
     4021 ccaaatccca gtgcggcgcc gtcgcgcagc tatccggacc tgcacgacca catccgcgcg
     4081 ctcgacaagg ccggcctgct cgtcaccgtc gatcggccga tcaacaagga caccgagatg
     4141 cacccgctgg tgcgctggca attccgcggc ggcatcgagg agaaggaccg caaggctttc
     4201 ctgttcacca acgtcgtcga cagcaagaag cgcaaataca atataccggt cgccgtcggc
     4261 gtgctggcgg ccaaccgcga aatctatcgg atcggcatag gctgtcggct tgaagagatc
     4321 gatgagcgct g
//
LOCUS       DATILV010000313         4533 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2120651, whole genome shotgun sequence.
ACCESSION   DATILV010000313 DATILV010000000
VERSION     DATILV010000313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4533
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2120651"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..673)
                     /locus_tag="VLJ17_07135"
     CDS             complement(<1..673)
                     /locus_tag="VLJ17_07135"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HSV22787.1"
                     /translation="MNCDRNELSFADYRASTFRPGFDGLRGVGFLLVVTAHIPAAPLF
                     SYLQGWTAVWVFFAISGYLVTMLLIREERKTGTIGYGSFLVRRFFRIVPGYAATVLIY
                     GVALYSLSPLGNEYQLFMARLPYYLTLMPEYAQTDVFTIFVHSWIIGVETKFYVFYPA
                     VVFLLIGNDAWRFGVTAVTTALLTAQGSFTAHSYCAILAGVMLAQLLEWPRGYAAIAT
                     LTRVPA"
     gene            complement(841..1044)
                     /locus_tag="VLJ17_07140"
     CDS             complement(841..1044)
                     /locus_tag="VLJ17_07140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HSV22788.1"
                     /translation="MQKGTVKWFNPTKGYGFIRPSTGEKDVFVHISAVERAGLSTLNE
                     GQVVEYELVTNRGKTSAENLKVA"
     gene            complement(1360..3462)
                     /locus_tag="VLJ17_07145"
     CDS             complement(1360..3462)
                     /locus_tag="VLJ17_07145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006201558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin oxidoreductase family protein"
                     /protein_id="HSV22789.1"
                     /translation="MRDAGGSTRVGTSACPHDCPSTCALEVEVLDAHTIGRIRGAADN
                     NYTSGVICAKVARYAERLHHKDRLLAPLRRKGGKGSGEFSAISWDDALDITAEALLRA
                     EQRHGAQSVWPYYYAGTMGLVMRDGINRLRHAKKYSGFHSTICVNPAYSGFAAGVGKI
                     AGPDPREMAKSDLIVIWGTNAVSTQVNVMTHATRARKERGAKIAAVDVYMNGTMRQAD
                     LPVLIRPGTDGALACAVMHCLFRDGHADHNYLGRYTDAPAELAAHVRGRTPEWASCIT
                     GCDVATIEAFATLIGERKRAFFRLGYGFSRSRNGAANMHAASCIPAVTGAWLLEGGGA
                     FHSNADIYHLNKTMIEGLDVVDPSVRRLDQSRIGAILEGDDDALAGGPKVAALFVQNT
                     NPLSVAPDQERVKRGFAREDLFVCVHEQFMTETARAADIVLPATMFLEHDDFYRGGGH
                     QFIILGPKLIDPPGECRNNHQVHCALAQRLGAIHPGFAMTPRELIDWTLRASGWGTLS
                     DLEANRWIDCQPDFATAHYVNGFPWPDGRFRFKPDWRNVPFRSPIRSGPVDGLPILPD
                     HWDVIEEADQAHPFRLATSPARNFLNSSFTETPGSITRERRPEVLIHPDDAAAAGITD
                     GSAVVLGNQRGEIVVHARLYEGVRRHVLIAESIWPNDAHPDGRGINTLTGADPIAPHG
                     GAAFHDNKVWIRPQRRVA"
     gene            complement(3610..4461)
                     /locus_tag="VLJ17_07150"
     CDS             complement(3610..4461)
                     /locus_tag="VLJ17_07150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HSV22790.1"
                     /translation="MLAGEMMRPTFWLAAMQIMGINILLSGDNAVVIALAVRELPPRE
                     RFWGMVLGAGCAAVLLILFTGIVATLLKLPYLKLIGGLALFWVAVKLVAPQPHDAEDT
                     PEAVEDLWRAVRVVVVANIVMSLDNVIAVAAAAKGNYLLLGLGLAISIPVVIAGSALF
                     LALLERFPWVVWAGGALLGWIAGGLLPDDAILAQYIAKIYGMSIVPSLWPDAQAISEG
                     LATVTKLSLETDYSWMGSAGRLMFEFEVDPVGLICGILGATFVVLMGLYLVRSSRVAE
                     PEPAPSS"
BASE COUNT         1007 a         1413 c         1316 g          797 t
ORIGIN      
        1 cggcaggcac ccgcgtcagc gtcgcgatcg ccgcatagcc gcgcggccac tccaatagtt
       61 gcgccagcat gacgccggcc aggatggcgc aataggaatg ggccgtgaac gagccctggg
      121 cggtcaacaa cgcggtggtc accgccgtta cgccgaaccg ccaagcgtcg ttcccgatga
      181 ggagaaaaac gacggcggga taaaacacat agaacttcgt ctcgacgccg ataatccacg
      241 aatgaacgaa gatcgtgaac acgtcggttt gggcatactc cggcatcagg gtgagataat
      301 agggcagcct cgccataaac aactggtatt cattgccaag cggcgacaac gaataaagtg
      361 cgaccccata gatcaggact gtggccgcat agcccggcac gatgcgaaag aagcgcctca
      421 ccaggaacga accgtacccg atcgtgccgg ttttacgttc ctcccggatc aacagcatcg
      481 ttaccaggta gccgctgatc gcaaagaaca cccaaaccgc cgtccatcct tgcagataag
      541 aaaacagcgg cgccgccggg atgtgggcgg tcacgacaag cagaaagccg acgccgcgca
      601 atccatcaaa acccggacga aaggtgctgg cccgataatc ggcgaagctc agttcgttgc
      661 gatcgcagtt caaaggcacg cccgcccaag cgaatcggcc gagaaggact caatttggaa
      721 agaatcctcc cgagagtaac tcgcaactgc aggaaaatgt cgaccacaaa taaaaacccc
      781 cgggttggaa accgggggct acgggcaaca cccgtttgcc ggaaggtccg gcaagggccg
      841 ctatgcgacc ttgaggtttt ccgcggaggt cttgccgcgg ttggtgacga gttcgtactc
      901 gaccacctgt ccctcgttga gggtgctgag gccggcgcgc tcgacggcgg agatgtggac
      961 aaatacatcc ttctctcccg tcgacggccg aatgaaccca tagcccttcg ttggattgaa
     1021 ccatttgacg gtgccttttt gcatcgtctg tctcctagat cagtcagaac gtaagatgag
     1081 acgcgaatgc gtccgctgca attcgcgccg acaagccggg attttggatg ggttcgagac
     1141 gatcacgcat caaacgtctg cggccgaacg aacggccaaa aattcggatt gctggcggca
     1201 tgaatactta aaaatacggc cgaagcaagg ctcgcgatcg aaccacacaa caactctgtg
     1261 ccacaagttc gaatcgcaat ctaaatcacg cacaccgcac tttccacata acgttaaaaa
     1321 accgtgaaca agtcttgaaa gctgtgatca aagcttcgat caggcaacgc gcctctgcgg
     1381 tctgatccaa accttgttgt cgtgaaatgc ggctccgccg tgcggcgcga ttggatctgc
     1441 gcccgtcaac gtattgatgc cgcggccgtc cgggtgggca tcgttgggcc aaatcgattc
     1501 cgcaatcagc acatggcggc gcacgccctc gtacagccgc gcgtggacca cgatctcgcc
     1561 acgctgattg ccaagcacca ccgcgctgcc gtctgtgatt ccggcagctg cagcgtcgtc
     1621 gggatgaatc aaaacttcgg gccgcctttc ccgcgtaatc gagccgggcg tttcagtaaa
     1681 tgacgagttg aggaaatttc gtgccggcga cgtggcgaga cggaacggat gggcttgatc
     1741 cgcttcctcg atcacgtccc agtggtcggg aagtatcggc agaccgtcca ctgggcctga
     1801 tcggatcgga ctgcggaacg gcacgttacg ccaatccggc ttgaagcgga atctgccatc
     1861 gggccaggga aaaccattga cgtagtgagc agtggcaaaa tcgggctggc aatcgatcca
     1921 ccgattcgcc tcgagatcgc tcagcgtgcc ccatccggat gcccgcaagg tccagtcgat
     1981 caattcgcgg ggcgtcatgg caaaacctgg atgtatggca ccaaggcgct gtgcgagcgc
     2041 gcaatgaacc tggtgattgt tgcggcattc ccctggcgga tcgatcagct tgggcccgag
     2101 gatgatgaat tggtggccgc caccgcggta aaaatcgtcg tgctcaagga acatggttgc
     2161 cggcagcaca atgtcagcgg cacgggccgt ttccgtcatg aattgctcgt ggacgcacac
     2221 gaacagatcc tcgcgggcaa agcctcgctt cacccgctcc tgatcaggcg cgaccgaaag
     2281 cgggttggtg ttttggacga agagggccgc caccttgggc cctccggcga gcgcgtcatc
     2341 gtcgccttcc aggatggcac cgatgcgtga ctggtcgagc cggcgcaccg aagggtcgac
     2401 gacatcgagc ccctcgatca tggtcttgtt gaggtgatag atgtcagcgt tgctgtggaa
     2461 tgcgccgcca ccttccagta gccacgcgcc cgtgacagcc gggatgcaac tcgccgcatg
     2521 catgttggcg gcgccgttgc gcgagcggga aaagccataa ccaagccgaa aaaaggcgcg
     2581 cttgcgctcg ccgatcagcg ttgcgaaggc ctcgatggtg gcgacatcgc agccggtgat
     2641 gcatgacgcc cactcaggcg tccgcccgcg cacgtgggcg gcaagttccg cgggcgcatc
     2701 cgtatagcgg ccaagatagt tgtgatcggc gtgcccgtca cggaacagac aatgcatcac
     2761 ggcgcaggcg agtgccccgt cggtgccagg acgaatcagg accggcaaat ccgcctgccg
     2821 catcgtgccg ttcatgtaca cgtccacagc ggcaatcttg gcaccccgtt ccttgcgggc
     2881 gcgtgtcgca tgggtcatca cgttgacctg ggtactgacc gcattcgtgc cccagatcac
     2941 gatgagatcg gatttcgcca tttcacgcgg atcgggcccg gcgatcttgc caactccggc
     3001 cgcaaacccg ctataggccg ggttgacgca aatggtggaa tgaaagcccg agtatttctt
     3061 agcatggcgc agccgattga tgccgtcgcg catgaccaga cccatggtgc cggcatagta
     3121 atacggccac accgactggg cgccatgacg ttgttcggcg cgcagcagcg cttccgccgt
     3181 gatgtcgagc gcatcgtccc acgatatcgc tgagaattcg ccgctcccct tgccgccctt
     3241 gcggcgcagc ggcgccagca gtcgatcctt gtggtgcagc cgctcggcat aacgcgcaac
     3301 cttggcgcag attacgcccg acgtatagtt gttgtccgca gcgccgcgaa tgcggccgat
     3361 cgtgtgagcg tcgagaacct ccacctcgag cgcgcaagtg gacgggcagt catgcggaca
     3421 ggcagacgtg ccgacccgag tcgagccccc ggcgtcccgc atggcctggt tcacggcacg
     3481 aaagccctcc tagagcctcg ttcgccggac ttgacccggc gatccatcga cagaaaaaca
     3541 ctttctgtga ggcggatgca tccgcgggtc gagccccgtg tatgacgttc aacgctctca
     3601 aagcgcgctc tagcttgatg gagccggctc aggttccgcc acacgactcg agcgtaccaa
     3661 atataatccc ataaggacga cgaaggttgc acccaaaatt ccgcagatca gtccgactgg
     3721 atccacctcg aattcgaaca tcagccgccc cgcgcttccc atccacgaat agtcggtctc
     3781 cagcgagagc ttcgtcacag tggcgaggcc ttccgagatc gcctgggcgt ccggccatag
     3841 actcggcaca atggacatcc cgtagatttt agcgatgtac tgggcaagga tggcatcgtc
     3901 cggcagtaac cccccggcaa tccatccgag caacgccccg cccgcccaca caacccaggg
     3961 aaatctctca aggagcgcca gaaacagcgc gctgcccgcg atgacaaccg gaatgctgat
     4021 ggccagccca agcccgagca gcagatagtt tcccttcgcg gccgccgcga ccgcgatgac
     4081 gttgtcgagg ctcatcacga tgttggcgac gacgacgacg cgcaccgccc gccacaagtc
     4141 ctcgaccgcc tccggcgtgt cttcggcatc atgcggctgg ggtgccacaa gtttgacagc
     4201 gacccaaaac aaagcaagcc caccgatcag cttgagatag ggcagcttga gcaaggtcgc
     4261 gacgatgccg gtaaacaaga ttaacaaaac cgccgcacaa ccggcgccaa gcaccatgcc
     4321 ccaaaaccgc tcccgcggcg gcagctcacg taccgcaagc gcgatcacga cggcattgtc
     4381 tccggacagc agaatattga tccccatgat ctgcatggcg gctagccaga aggtcggccg
     4441 catcatttcg cctgccagca tttccacgag atcgttcccc caaaattcac cgtacgtacg
     4501 ctgtaagcaa ttggcgccaa tgacatgttt gtc
//
LOCUS       DATILV010000314         4957 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3396501, whole genome shotgun sequence.
ACCESSION   DATILV010000314 DATILV010000000
VERSION     DATILV010000314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4957)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4957)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4957
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3396501"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            54..1793
                     /locus_tag="VLJ17_07155"
     CDS             54..1793
                     /locus_tag="VLJ17_07155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018856978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HSV22791.1"
                     /translation="MARAATLFAYRVWLPRLDAKWLVVGAAVGLAAWLSLVPLGFLLW
                     HSLLTPETATTPAQLTFDNYRTAYWSAETLRVFANSAVFAVGSASLAFVIGTLFAWVN
                     ERTNTPFKSTFFALSLIPLVTPAILFTVSWILLASPKIGIINVAFQELFATELVIANI
                     YSMSGMIFVDGLHQSPLAFLLMTAAFRSMDPSLEESALMCGATMLQIARRITLKLVGP
                     AAIAVFLILFLRAIESFEVPAILGLPVGIEVYTSSIYQAIQAYPSDIGLASSYAVVLL
                     VIASLCVYAQSRTTAEVEKFSTITGKGFRPRVMHIGRWRYLTAATFAAYLVVLVALPF
                     LVLVWCSLQKFYVAPSMAALKTVTFDAYRAVFNYPVFVGAVWNSLVLSVASATIVALT
                     TAVLCWIVMRTKLPGRWLLDNLASLPLMFPGLVLGLAIMVCYLNVRIGVYGTLWIMLI
                     AYVTRFMPYGMRYNATSMLALHRELEESATMSGASWGMTFWRVVLPLLKPGLIAGWIY
                     VVIVSMRELSSSILLYSPGSEVLSILIWEYWQNGQYVELSALGVMLIASLLCLVLLER
                     FARRRFGIAEPGL"
     gene            1816..2940
                     /locus_tag="VLJ17_07160"
     CDS             1816..2940
                     /locus_tag="VLJ17_07160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018856975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV22792.1"
                     /translation="MLIVKSLCTEYPGDRGQAIRATHDVSFDVPDGKLFTLLGPSGCG
                     KTTTLRSIAGLEMPKSGEISLHGKVVFSSSARIFIPPNRRNFGMVFQSYAIWPHMSVY
                     ENAAFPLEARRRKPSRKEIADRVMRVLRAVGLDDLVERTATKLSGGQQQRLALARALL
                     MEPQLLLLDEPLSNLDAKLRERMRFELKRMQRELALTTVYVTHDQSEALALSHEIAVM
                     SEGRIVQIGSPREIYQRPRNRFVADFIGTTNLIDAQVIDETQDGRCRVGTPIGALDVA
                     CLDRVRRNEAVIVSVRPEDIELSEQQPEGTDRDTVCVGSVDAKAFLGEHLDFHVKIGN
                     LVLLARAHPSLRTPVGDRIFVRMRADKCIALPARSESARA"
     gene            2979..4091
                     /locus_tag="VLJ17_07165"
     CDS             2979..4091
                     /locus_tag="VLJ17_07165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22793.1"
                     /translation="MVKNATVSEELANKFASEKETPYLRWVRDEGLDIISAHYVPNLR
                     TVALKPWARRGGAGVFINHEASRTSNDCYVCEIPAGGKLSPQRQLFEEMILALDGRGS
                     TTVWNDAGNRISFEWKAGAMFAIPLNTWHQHFNGSGTTPVRFVAATNCPSVLNLYDDL
                     AFVFNTSHDFKNRFAGEPDYFSAKGEQRGFLLTTNFVPDAVNLPLISAKERGAGGGHI
                     RFNMARGTIASHISQFPIGTYKKAHAHGPGAHVIVLSGEGYSLMWPEGDPPRRYDWQV
                     GTLIVPPNAWFHQHFNTGPTPARYLAFKHATPRNAQGVPMSWISRRLGGMQIDYADED
                     PEIRRMFAEALSNHGLKPRMDDVYEAEIATLPPKAA"
     gene            4187..>4957
                     /locus_tag="VLJ17_07170"
     CDS             4187..>4957
                     /locus_tag="VLJ17_07170"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSV22794.1"
                     /translation="MRGWWLLGRHLQVKGLFALICALVLWPCRPVYAQVAISTSAEMA
                     SYVGADRTEKLIAGARKAGTVTIYTSANIEDMTVLTGAFEKKYGIKARVWRASSEQVV
                     QRAVTEARGGRFDADVFETGGAAMESLHREKLLQEVKSPALGDLNPAALTPHGEWTGT
                     RFNVFVAAYNTRLIRRDELPKSYDDLLDPKWKGKLGIEADDSDWFGALMGRLGEERGL
                     QLFRGIAATNGISVRKGHTLLANLIISGEVPLAITTYAY"
BASE COUNT          947 a         1472 c         1477 g         1061 t
ORIGIN      
        1 taagaaatcg cccgctatgg ctccgcgccg cgcaacgata atgtgaccgg aaaatggccc
       61 gggcagcaac gctgtttgcc taccgcgtgt ggcttccgcg cctggacgcc aagtggctcg
      121 tcgtcggcgc cgccgttgga ctcgctgcct ggctgtcgct ggtgccgctc ggtttcctcc
      181 tctggcacag cttgttgacg cctgagaccg ccacgacgcc ggcgcagcta accttcgaca
      241 attatcgcac cgcctattgg agcgccgaaa cattacgcgt attcgccaat tcggctgtat
      301 tcgcggtggg atcggcgagc ctcgcctttg tcatcggcac gcttttcgcc tgggtcaacg
      361 aacggaccaa tacccctttc aagtccactt tcttcgcgct gtcgctaatc cccctcgtta
      421 ccccggcgat tctcttcacg gtgtcctgga ttctgctggc gagcccgaaa atcggcatca
      481 tcaacgtcgc ttttcaggaa ttattcgcca ccgaactcgt catcgcaaat atctattcaa
      541 tgagcggcat gatctttgtc gacggcctac accaatcgcc gctcgctttt ctgctgatga
      601 cggcagcgtt ccggtcgatg gacccttcgc ttgaagaatc tgcgttgatg tgcggcgcaa
      661 ctatgctgca aattgcccgg cggataacat tgaagctcgt ggggcccgcg gcgatcgcag
      721 tgttcctcat ccttttcttg cgtgcaatcg agtcattcga agtgccggcg atacttggac
      781 ttcccgtcgg gatcgaggtc tacacgtcat cgatctatca agctatccaa gcgtatccga
      841 gcgatatcgg gttagcatcc agctacgcgg tggtgcttct cgtgattgca tcgctgtgcg
      901 tctatgcgca gtcgcgtacc accgccgagg tcgaaaaatt ttcaaccatt accggcaagg
      961 gatttcggcc gcgcgtgatg cacattggcc ggtggcgcta ccttaccgcc gcaaccttcg
     1021 cggcgtatct tgtcgtcctc gtcgcattgc cgttcctggt gctggtctgg tgctcgctgc
     1081 agaagtttta cgtcgcaccc tcgatggcag cgttgaagac cgtgaccttc gacgcctacc
     1141 gagccgtttt caactacccg gtgttcgtcg gtgcggtctg gaacagcctg gtgctctcgg
     1201 tcgcaagcgc caccattgtg gcacttacaa cggccgtgct gtgctggatc gtgatgcgaa
     1261 ccaagctgcc cggtcggtgg ttactcgaca atctcgcttc gttgccctta atgtttcccg
     1321 gcttggtttt gggcctcgcc atcatggttt gctatctcaa cgtccgcatc ggtgtctacg
     1381 gcaccctctg gatcatgctg atcgcctatg tcacccgatt catgccctat gggatgcgct
     1441 ataatgcaac ctcgatgctt gcgttgcaca gggaactgga ggagtccgca acgatgagcg
     1501 gtgcctcgtg gggcatgacg ttctggcggg tcgtcttgcc attgctcaaa cccgggctga
     1561 tcgccgggtg gatctatgtg gttatcgtgt ccatgcgcga gctttccagc tccatcctcc
     1621 tatacagtcc gggatcggaa gtcctatcga tcttgatctg ggaatattgg cagaacggac
     1681 aatatgtgga gctttcagcg ctaggcgtga tgttgatcgc gtcgttgttg tgcctcgtgc
     1741 tgctcgaacg atttgcccgt cgacgattcg gcatagcgga gcccggactc tgatggtcca
     1801 gctgcaggtt aaatcgtgct gatcgtcaag tcgctctgca cagaatatcc gggcgaccgc
     1861 ggccaagcga tccgggcgac ccatgacgtc tcgtttgacg tacctgatgg aaagctgttc
     1921 acgctgctgg gcccgagcgg atgcggcaaa acgacgacgc tgcgctccat cgcgggccta
     1981 gaaatgccga agtccggcga gatcagcctg cacggcaaag tcgtcttctc atcgtcagcg
     2041 aggatattca ttccgccgaa ccggcgcaat ttcggaatgg tgtttcaatc ctacgccatc
     2101 tggccacata tgagcgtcta cgaaaatgca gcgtttccgc tcgaggcccg ccgccgcaaa
     2161 ccaagccgca aggaaatcgc cgacagggtc atgcgagtcc tgcgcgcagt agggctggat
     2221 gatctcgtag agcgaacagc caccaagctg tcgggcggtc aacaacagcg tctcgcactg
     2281 gcgcgggcgc tgctcatgga gccgcagctt cttctgctgg acgaaccgct gtcgaacctc
     2341 gacgccaagc tccgcgagcg gatgcgcttt gaactcaaac gcatgcagcg tgaactcgcg
     2401 ctgacgaccg tgtatgtcac gcatgatcaa agcgaggcgc tcgcgctgtc gcacgaaatc
     2461 gccgtcatga gcgaaggacg gattgtgcag atcggctcgc cgcgtgagat ctaccagcgg
     2521 ccccgcaacc gatttgtcgc cgatttcatc ggcaccacca atctgatcga cgcgcaggtc
     2581 atcgatgaga cgcaggatgg tcgctgccgc gtcggtacgc ccatcggtgc actcgatgtc
     2641 gcttgccttg atcgcgtgcg ccggaacgag gctgtgatcg tgtcggtccg gcccgaagat
     2701 attgagttat ctgagcagca gccggagggc acggatcgag atactgtttg cgtaggctcc
     2761 gtggacgcca aggcatttct cggcgaacac ctggatttcc acgtcaagat aggcaatctt
     2821 gtcctgctcg cgcgggcgca cccctcgctc aggaccccgg tgggcgaccg gatttttgtg
     2881 cgtatgcgag cggacaagtg catcgcgttg ccggcccggt cggaatccgc cagggcatga
     2941 cgtgcgtgcc cggtcaggcg tctgccacgg aggcttgcat ggtgaaaaat gccaccgtct
     3001 cggaggaact ggcgaacaaa tttgcgagcg aaaaagagac accttacttg cgctgggtac
     3061 gcgatgaagg tctcgacatc atcagcgccc attatgttcc caaccttcgc accgtcgctc
     3121 tgaaaccatg ggcgcgtcgc ggcggcgccg gggtgtttat caatcacgag gcttcacgca
     3181 cttcgaacga ctgctatgtg tgcgaaattc ccgccggggg gaaacttagc ccccagcggc
     3241 agcttttcga ggagatgatc ttggcgctcg acggtcgcgg atcgacgacc gtctggaacg
     3301 acgctggcaa ccgcatcagc ttcgagtgga aggcgggtgc gatgtttgcg attccgctca
     3361 atacttggca tcagcacttc aatggctcag gcacgactcc ggtgcgtttc gtcgcggcca
     3421 ccaattgtcc atccgtgctc aacctttatg acgatctcgc attcgtcttc aacacatcac
     3481 acgatttcaa gaaccgtttc gccggcgaac ccgactattt cagcgccaag ggtgagcaga
     3541 gaggatttct gctgacaacg aacttcgtcc cggacgctgt caaccttccg ctgatcagcg
     3601 ccaaggagcg cggggctggc ggcggccaca tccggttcaa tatggcgagg ggcaccattg
     3661 cgagccacat ttcgcaattc ccgatcggca cttacaaaaa ggcgcatgca cacggaccgg
     3721 gcgcgcatgt catcgtgctc agcggcgagg gctactccct gatgtggccg gaaggcgatc
     3781 caccgcgccg ctacgactgg caggtcggga ccctgatcgt gcctcccaac gcatggttcc
     3841 accagcactt taacactggc ccgacgccgg cacgctattt ggcgttcaag catgccacgc
     3901 cacggaatgc gcagggcgtt ccgatgtcgt ggatcagccg ccggctgggg ggaatgcaga
     3961 tcgattacgc cgatgaggac cccgagatcc gtcggatgtt cgccgaggcg ctgtccaatc
     4021 atggattgaa gccccgcatg gacgatgtct acgaggcgga aatcgccacc ttgccaccca
     4081 aggccgcgtg agacaaggcg ccgtgttgga gccgatgtaa tcggcttttc acgagcgccg
     4141 cgggttgata tcatcgctgc gcttcggttc tatccgggga atcgtgatgc gtggttggtg
     4201 gctcctggga cgacacctgc aggtgaaggg gttgttcgcg ctcatatgcg cgcttgtgct
     4261 gtggccgtgc cggccggtgt acgcacaagt agcgatctcg accagcgctg agatggcatc
     4321 ctatgttggg gcggaccgaa ccgagaaact gatcgccggt gcaaggaagg caggcaccgt
     4381 cacgatttac acctccgcga acatcgagga catgacggtt cttaccggtg ccttcgagaa
     4441 gaaatacggc atcaaagctc gggtgtggcg tgccagctcg gagcaagtcg ttcagcgtgc
     4501 agtaaccgag gcgcgtggcg gccggttcga tgcggatgtc ttcgaaacgg gtggcgccgc
     4561 gatggagtcc cttcataggg agaagctgct tcaggaggtg aagtcgccgg cactcggcga
     4621 cctcaatcct gctgccctga cgccgcatgg agagtggacc ggaacgcggt tcaacgtgtt
     4681 cgttgccgcg tacaacacgc gactgatccg aagagacgaa cttccgaaaa gctacgacga
     4741 tctcctggac ccgaaatgga agggcaagtt gggcatcgaa gctgatgata gcgactggtt
     4801 tggtgcgctg atgggccgat taggagagga acggggtctc cagctgttcc gcggcattgc
     4861 ggccaccaac ggcatatcgg tgcgcaaggg gcataccttg ttggcgaacc tcatcatctc
     4921 cggagaggtg ccgctggcga tcacgaccta cgcctac
//
LOCUS       DATILV010000315         2475 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3910108, whole genome shotgun sequence.
ACCESSION   DATILV010000315 DATILV010000000
VERSION     DATILV010000315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2475)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2475)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2475
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3910108"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            515..1294
                     /gene="hisN"
                     /locus_tag="VLJ17_07175"
     CDS             515..1294
                     /gene="hisN"
                     /locus_tag="VLJ17_07175"
                     /EC_number="3.1.3.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007615123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004401 - histidinol-phosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphatase"
                     /protein_id="HSV22795.1"
                     /translation="MTAIDFSSFVDQLASASGDTILPFFRTGLAIENKKAGGFDPVTA
                     ADRAAEQTMRALIRKNFPDHGILGEEYGAERTDAEYVWVLDPIDGTKSFIAGMPAWGT
                     LIGLMRFGEPVFGMMNQPFTRERFSGDGGAAHYRGPVGNRELHVRACASLADATLFTT
                     SPLLMNKSDRVDFVRVESVVKLSRYGGDCYAYCMLAAGQIDLIIETEVQPYDIVPLIP
                     VISGAGGVVTTWENGPAQAGGRIVVAGDKRIHQAALKILKG"
     gene            complement(1454..>2475)
                     /locus_tag="VLJ17_07180"
     CDS             complement(1454..>2475)
                     /locus_tag="VLJ17_07180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018646769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HSV22796.1"
                     /translation="LAQSRQPLIVEEIGFPDELNVGQVLVKVLHTSICGAQLNEIGAV
                     KGPDKFLPHLLGHEASGTVIETGPGVTHVKAGDTVVLHWRPSQGIQSLPASYLWRGKK
                     LNAGWVTTFNEYAVVSENRMTVIPPDVDLKIAPLFGCAVTTAAGVITNDAKVKLGESV
                     VVFGTGGVGLPVVQFASLAGANPVIAIDVHQSKLAMARERGATHTIEAGAGVDVAAEV
                     RKIVGVKGPDKVIETTGAKLVIELAYDLTHPDGTCVLVGVPSEKVTIYTLPIHFNKVL
                     TGSHGGDAAPHIDIPRILRLVQAGRISFDGIITHEFPLDNINEALDVVRSGAAGRVLL
                     NIGSR"
BASE COUNT          497 a          757 c          731 g          490 t
ORIGIN      
        1 tcgggcttca cgccattcag cttgagatca accgtgccct ctacatggat gaacgccgct
       61 atcagcgttc ctcgacattc agtcgtctgg cagccgatat ggaaacgttg gccaggcggc
      121 tgagcgaaat ccctttggag cagcttcggc cctaccgggc cgccgccgag taggttgacc
      181 aaaaaaaggg gccgccagcg ggtgcgagcg gcccaagtct agggaggaaa cgcccaagga
      241 gggcagcgat agctctcgct accgcgttgc aataaattac actgcgacgc acaaatatca
      301 aggctcagaa cctacttttc catgctttta tgcatggctg aataccagaa tcggtgctta
      361 tggttcagcc atgcgaaaat atgggtgcgg aggcactccg cagcgcaaca aaaactgttt
      421 tccagcaacc catcacctgc attggccaag gtagccgcgt aaggctcccg gctgcggttg
      481 ccgcagcggt aagtctccga taggtcgagg cgacatgacg gccatcgatt tctcaagctt
      541 cgtcgaccaa ctcgccagtg cgtcgggcga caccatcctg ccgttcttcc gcaccgggct
      601 cgcgatcgag aacaagaaag ccggcggctt cgatccggtt accgcggccg accgtgctgc
      661 cgagcaaacc atgcgcgcgc ttatccgcaa gaattttccg gaccacggaa ttctcggcga
      721 ggaatacggc gccgagcgca ccgatgccga atatgtctgg gtgctcgacc cgatcgacgg
      781 caccaaatcc ttcatcgccg gcatgccggc ctggggcacg ctgatcggcc tgatgcgttt
      841 cggcgaacca gtgttcggca tgatgaacca gccgttcacg cgcgagcgct tttccggtga
      901 cggcggcgcg gcgcattacc ggggaccggt gggaaaccgt gagctgcacg tgcgcgcatg
      961 cgcgagcctc gcagatgcga cgttattcac caccagtccg ctgctaatga ataaatccga
     1021 ccgcgtcgat ttcgttcggg tcgagagcgt cgtcaagctc tcgcgttacg gcggcgattg
     1081 ctacgcctat tgcatgctgg cggcggggca gatcgatctc atcatcgaga ccgaggttca
     1141 accctatgac atcgtgccac tgatcccggt gatttccggc gccggcggcg tggtcaccac
     1201 ctgggaaaac ggtccggcgc aggccggcgg ccgtatcgtg gtcgccggcg ataagcgcat
     1261 tcaccaggcg gcgctgaaga tactcaaggg ctagggcgtg ccattattaa cgccaacgtc
     1321 ggatttcaga agaagagcag acaccacagc taaaagctcc gggctccgat tgctgatgct
     1381 gtcgcttggc tgagcggggc caacttgtct ctaatcaatc cacccgatct atagcgttcg
     1441 ctgcgcggaa gcttcaccgc gatccgatgt tcagcaaaac gcggcccgcc gccccgctgc
     1501 gaacgacgtc gagcgcctcg ttgatattat caagcggaaa ttcgtgcgta atgattccgt
     1561 cgaacgaaat acggccggcc tgcaccaatc tcaggatacg cgggatgtcg atgtggggcg
     1621 ctgcatcgcc tccgtgcgag ccggtcagta ctttgttgaa gtggatgggc aacgtataga
     1681 tcgtcacctt ttccgacggc acgccgacaa gcacgcaagt cccgtccgga tgagtgagat
     1741 cgtaggcaag ctcgatcacc aatttggcgc cggtcgtctc gatgaccttg tccggacctt
     1801 tgactccgac aatcttgcgt acttccgccg cgacatccac gccggccccg gcctcaatcg
     1861 tgtgcgtggc gccgcgctcg cgcgccatcg ccaatttgct ttggtgcacg tcgattgcga
     1921 taacggggtt ggcgccggca aggctggcga attgcacgac cggcaggccc accccacccg
     1981 ttccaaagac cacgaccgat tcgccgagct tgaccttggc gtcgttggtt atgacgcccg
     2041 cggccgtcgt cacggcgcaa ccaaacagtg gtgcgatttt gagatcaaca tcgggcggga
     2101 ttaccgtcat gcggttttcg gaaacgacgg cgtattcatt gaatgtcgta acccacccag
     2161 cattgagttt tttgccgcgc caaagatagg acgccggtag gctttggatg ccctgactcg
     2221 gccgccaatg cagcacgacg gtatcgcctg ccttcacgtg ggtgacgccg ggacccgtct
     2281 cgataaccgt tccggacgct tcgtggccaa ggaggtgggg taggaacttg tccggccctt
     2341 tgaccgctcc gatctcatta agctgcgccc cgcagatcga ggtgtgcagc accttcacca
     2401 gcacttggcc gacgttgagc tcgtccggaa atccgatttc ctcgacgatg agcggttgtc
     2461 gcgactgagc gagga
//
LOCUS       DATILV010000316         1541 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3910171, whole genome shotgun sequence.
ACCESSION   DATILV010000316 DATILV010000000
VERSION     DATILV010000316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1541
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3910171"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            523..>1541
                     /locus_tag="VLJ17_07185"
     CDS             523..>1541
                     /locus_tag="VLJ17_07185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22797.1"
                     /translation="MATTLFNKTALANGTSNLIVRADALNQSTDLVQAGVVFNDAVRA
                     SLGLFNLTGSGNSNPFLSSYTTDIHAVQNDIAAMLAAPGHVTLGGQAFTLNTTDTAVL
                     TSIQAQLGTLLAAAPQTTNAATLTAADQTIHAVQAEILQEINNDPHIAAALNQVTFMA
                     NTGANDVAFQNTPAGADDPAAIAAATAGSSLKAVGTVFNAAADVAAGGISPANLGQVT
                     ADLTAVQTGLTNILNNHTMLAQIEAGETANAAALTTVHLQTVLGQIGLQLNKYDAAEA
                     TGQATALRGTADNILDIIDIVQNDTALNKAAGGNGAAGHAGGFAEMPGGLTGTVTKFQ
                     DNQAQT"
BASE COUNT          339 a          481 c          454 g          267 t
ORIGIN      
        1 tacggctcac tcagtggcaa cagttagagt cttggttcac tcggagtcaa ttccggtgaa
       61 ggtccggcgt ggcgcacgtc tgtcccgcat ttgccgcaag tatgacgaac atccgcaagt
      121 atgacgaaca taatggcttc gacgcgatcg gctcggacat ctgcatgtgc cgtccacacc
      181 tgcaccatgg catcgaagaa tgcgcgcagg aaaacagacg gtgtcagcga tgcggcaaga
      241 agttgtcgga gttgagttcg caatattgat tgcgatggtc gaatgctact catgcgaaag
      301 agaaaaagcg ccgcgtcgca aaatcatatt tgcccgaaca tcatcatagt tggggccatg
      361 ggtgcccttc ttttagcccg attagagtta acaaatccgg ctcgcacggc gcaacccctc
      421 accagctttg gtgaaggggg ctttatttct gaacatcgtc gtcgtcctgt ggggagcgcg
      481 ccaagcagga cgcgagcgat ctaatccggg gagactatct caatggcaac gaccttgttc
      541 aacaagacgg cgctggcgaa cggaacgtcg aatttgatcg tgcgcgccga cgcgcttaat
      601 caatcgacgg atctggtgca ggccggcgtt gtcttcaacg atgccgtgcg tgcgtcgttg
      661 ggcctgttca atttaacggg cagcggcaac tccaacccct tcctgagcag ttacacgacc
      721 gacatccatg cggtacagaa cgacatcgcc gcgatgctcg ccgctcccgg tcacgtgacg
      781 ctcggcggtc aggccttcac cctgaacacc accgataccg ccgtcttgac cagcatccag
      841 gcccaactgg gcacgctctt ggccgcggcg ccgcagacca ccaacgcggc gacgttgacg
      901 gcggcggacc agacgatcca cgccgtgcag gccgagatcc tgcaggaaat caacaacgat
      961 ccccatatcg cggccgcgct caaccaggtc acgttcatgg ccaatacggg cgccaacgac
     1021 gtcgcgttcc aaaacacccc ggcgggcgcg gatgatccag cagcgatcgc tgcggcgacg
     1081 gcgggctcga gccttaaagc ggtcggcacg gtcttcaacg cggcagccga tgtcgcagct
     1141 ggcggcatca gccccgcgaa tctgggccag gtcacggccg acctcacggc ggttcagacg
     1201 ggtttgacca acatcctgaa caatcacacc atgctggccc agatcgaagc gggcgaaacg
     1261 gccaatgccg cggcgctgac caccgtccac ctgcagaccg tgctggggca gatcggtctc
     1321 cagctcaaca aatatgacgc cgccgaggcg accggccagg ctacggccct gcgcggcacg
     1381 gctgacaata ttctcgacat catcgacatc gttcagaatg acaccgcctt gaacaaggcg
     1441 gccggcggca acggtgccgc agggcatgcg ggcggctttg ctgaaatgcc gggcggtctg
     1501 accggaacgg tgaccaagtt ccaggacaac caggcgcaga c
//
LOCUS       DATILV010000317        10702 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3653676, whole genome shotgun sequence.
ACCESSION   DATILV010000317 DATILV010000000
VERSION     DATILV010000317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10702)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10702)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10702
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3653676"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            292..1488
                     /locus_tag="VLJ17_07190"
     CDS             292..1488
                     /locus_tag="VLJ17_07190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSV22798.1"
                     /translation="MLDSAKRPENANRRLSASARSDVPAFMVMDVMAAAARLEAAGRR
                     IIHMEIGQPAAAAPTTAIAAARTALASGQIGYTQSLGIASLRRRIARHYAERHGAEID
                     PERIVLTTGSSAGFMLAFLAMFEPGDRIAIASPSYPPYRNVLTALGCEAVPLEVTAAT
                     RFALASQALLEAHGKRPLKGVLVASPANPTGTMMTSDALATLIRAAEGEGIAFISDEI
                     YHGLDYAFPAQTALNISADTVVINSFSKYFCMTGWRIGWMVVPEALVRPIERLQQNLF
                     ISVPTLSQMAAEAAFDGRDEMEAVKHGYEVNRRILMEGLPGAGLDQFLPVDGAFYLYA
                     DVSHFCSDSLEFARRMLEEAGVAVTPGADFDPVHGRRFIRFCYAGATADVGEAVERLG
                     AWLKRR"
     gene            complement(1491..2147)
                     /locus_tag="VLJ17_07195"
     CDS             complement(1491..2147)
                     /locus_tag="VLJ17_07195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013418610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HSV22799.1"
                     /translation="MEKPKLMIASKNYGSWSLRGWLLCKMAGLDFEEQVAAADDASTR
                     AELLLLSPSFLVPSLTNGSVKVWDTLAIAEYLNELFPEARLLPQDTAARALCRAVSGE
                     MHSGFINLRSALPMNIKGHYPAFKVFAGAQADIDRVVTIWRDCLAASNGPYLFGAKPC
                     LADAMYAPVCSRFLTYCVKLDPQCAAYCRTIMAMPHMDEWVEAARNEPDEVEELDMEF
                     "
     gene            2407..3618
                     /gene="phaZ"
                     /locus_tag="VLJ17_07200"
     CDS             2407..3618
                     /gene="phaZ"
                     /locus_tag="VLJ17_07200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoate depolymerase"
                     /protein_id="HSV22800.1"
                     /translation="MLYQAYQAHADFMVPVRALASLATSRLGPPFGENLGIVRNLTAA
                     YELIARAGLTHDRPPFDINSVTVGNREVAVREDAALVTPFGTLLHFKKDVDVAQPRVL
                     VVAPLSGHFATLLRATVNTMLADHDVYITDWHNVRDVALSHGRFGFDDYTQHLIDFLE
                     IIGPGAHMVAVCQPCVAALAATAVMAQSRHPAQPRSVTLMAGPIDARVNPTKVNELAN
                     SRPISWFEQNMIATVPMRFPGAFRRVYPGFVQLAAFMSMNIDRHIKAHQELYEHLRDG
                     EIEKAEITKAFYDEYFAVLDLTAEFYLETIQMVFQQHALPLGKLKWRGETVEPRAIRR
                     TMLLTVEGERDDICAVGQTMAAHELCSGLRPYLRRHHMQAGVGHYGVFSGQRWSGQIY
                     PILRNVILSSE"
     gene            complement(3877..4479)
                     /locus_tag="VLJ17_07205"
     CDS             complement(3877..4479)
                     /locus_tag="VLJ17_07205"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HSV22801.1"
                     /translation="MTAIGFALFDTAIGGCAIAWSERGVVGVQLPGRDAAATRARLTR
                     RYPGVHEADPPEQVARAIDSIVALVSGEHHDLSNIVLDLDGVPEFNRRVYAVARTIRP
                     GTTLTYGAIAAQLGEPDARGVGEAMGRNPCPIIVPCHRVVAAGGKTGGFSAPGGAATK
                     RRLLAIEGAHTTAEPTLFDRHGGLAFELKPQAAKTSRGRR"
     gene            complement(4575..7616)
                     /locus_tag="VLJ17_07210"
     CDS             complement(4575..7616)
                     /locus_tag="VLJ17_07210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008966864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HSV22802.1"
                     /translation="MANKMLIDATHPEETRVVVLRGNRVEEFDFESASRRQLRGNIYL
                     AKVTRVEPSLQAAFVDYGGNRHGFLAFSEIHPDYYQIPVADRQALIDEEERAHRDAEA
                     EADRRAGMRRQPPRHRAAERHTETVVSEPIDEDLVGADVPPIEASDARPDTPTHPDEG
                     YEPESGGQRHDREPAEHTDSAANDDDVTRVDAGAHTNATAHTEQDRRETEANEFDNHT
                     AIPEHDDAPVPGDATAGQEERDDAGDIAVTDLEATEQDHDDEANGQSESAEGDEEEIV
                     ESVGGDDAMEEVPDRAPRHRRQYKIQEVIKRRQIMLVQVVKEERGTKGAALTTYLSLA
                     GRYSVLMPNTARGGGISRKITNVLDRRRLKDIAQELEVPEGMGVILRTAGAARTKTEI
                     KRDFEYLLRAWETVRDLTLKSTAPTLVYEEGSLVKRSIRDLYNKDIDEVMVAGDEAFR
                     DARDFMRMLMPSHAKNVRPYQDSQPILAKYAIESQLDAMFSPVVQLRSGGYIVLNQTE
                     ALVAIDVNSGRATREHHIEDTALKTNLEASEEIARQLRLRDLAGLIVIDFIDMDEKRN
                     NRAVERRLKDCLKNDRARIQVGRISHFGLMEMSRQRIRTSVLESSTDKCPHCGGTGHV
                     RSVSSVALQLLRMIEETLQRGATHNIVGRTRAEIALYVLNHKRAHLYDLEHRFQISVT
                     IAADATISGQLPFVIEKGEQMHTLEQARALAARATSVPVAVEETGESDEPIDEVETEE
                     DEDSEFADTAEPGEPVEANEERAENGEGGARRRRRRRRRGRRGEAREEGLSLEETFEG
                     EGARAVSYTRSHDQPPSHPAAADDESGPASGNADPDLSDEDTEAGDTRADNGNGDSRR
                     RRRRGRRGGRRARREEHDADISPPENGVAPIDEEVAHAVADFGGPPVEPALQQRSREP
                     DLVAPDHSDGQPEAKPEPVPAMVSEPVAPLKPTAPRRRSTVREPAPFLAGSAAASPQP
                     APAIVTPVVEVETTAPPPSTSDPTAPRRAGWWAKRMLVDKS"
     gene            8271..9662
                     /locus_tag="VLJ17_07215"
     CDS             8271..9662
                     /locus_tag="VLJ17_07215"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HSV22803.1"
                     /translation="MVVCILARALAKPMSNLGPAKVSAGRAAAHIAARMVAMGRQSGG
                     LLVSIIVLAIALDLAWPLNARSQMPLPLPVPLPAAEAPPIATDARLAGDDKQTRLVID
                     LSRKIDMRAFTLADPYRVVIDIPQVNFQLPPNTGDRGRGVIKAFRYGLVMSGGSRIVL
                     DLTGPVRVTKAFVLDPVDGQPARMVLNLTAVDRETFLRAAAIDNHLPRPPEPPSLARP
                     DREEHTTDPRPLVVLDPGHGGIDPGTRAPSGELEKNLVLEFTSMLRNKLEGTGKYRVV
                     MTRADDTFVQLSERVRFARQRQAQLLISIHCDALARGSGEAEGATVYTLSDQASDAET
                     QRLADAENRADVIAGVDLAAEPDDIADILIDLAQRETRSFSAHFARSLVNEMRTAAHL
                     HKRPHRSAGFRILKAPDVPSVLIELGYVSNARDLKQLVSESWRSRTSDAIVHAVQTYF
                     TTRLAGGGAAPAQ"
     gene            9974..>10702
                     /locus_tag="VLJ17_07220"
     CDS             9974..>10702
                     /locus_tag="VLJ17_07220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HSV22804.1"
                     /translation="MRFLIRFLGFLFATGSVVLLVAAGAFFGLLYHFSKDLPDYSQLQ
                     DYEPPVMTRVHAADGELLAEYAKERRLYLPIQAVPKLVINAFISAEDKNFYEHSGLDV
                     GGIARAGWLYIQNLGSNRRPQGASTITQQVAKNFLLTNELSFSRKIKEALLALKIESA
                     YSKDKILELYLNEIYLGFGAYGVAAASLVYFDKPVNELTLAEAAYLAALPKAPSTLNP
                     FRARERATERRNYVIDRMVENGYVS"
BASE COUNT         1893 a         3345 c         3319 g         2145 t
ORIGIN      
        1 cctgccccgc ttgcggggga gggtggggag gaggccctat ggcaaaaagt attcaccgtc
       61 atcgaaaaat cggccttgct cgtttcggtc ttatcaagct acggaacttt gccacgctag
      121 gacgcgcttg tgcgtggtca acataggcgc cgaacatggc ggtaccaatc cggcaaatgc
      181 ggcgagagag gggcggttgc ctttgccgaa cccaagtata cccgggattc ggccacctga
      241 tgaagttgcc gaagccggaa acctccgagt ttggctggca ctacaaccat catgctcgat
      301 agcgccaaac gcccagaaaa tgcaaatcgg cggctgtcgg cttcggcacg cagcgacgtg
      361 ccggcattca tggtcatgga cgtgatggcg gcggcggcac gtcttgaagc cgccggtcgg
      421 cgtatcattc atatggaaat cggccagccg gccgccgctg cgcccacgac cgcaatagcg
      481 gcagcccgca ccgcgcttgc cagcgggcag atcggctaca cgcaatcgct cggcattgcg
      541 tcactgcgtc ggcgcattgc gcgccattac gccgaacgac acggcgctga gatcgaccct
      601 gaacgcatcg tgctcacgac cggctcctcg gccggattca tgctggcgtt cctggcaatg
      661 ttcgagccgg gtgaccggat cgcgatcgcg agcccgagct acccgcccta tcgcaacgtg
      721 ctgacggcgc tcggttgcga agcggtgcca ctcgaggtga cggcggccac gcgattcgca
      781 ctggcgtcgc aggcgctact ggaagcgcac ggcaaacggc cgctaaaggg ggtgctggtg
      841 gcgagccccg ccaatccaac cggtaccatg atgacatctg atgccctcgc cacccttatc
      901 cgggccgccg aaggcgaggg gatcgccttc atttcggacg aaatctatca tggcctcgat
      961 tatgcattcc cggcccagac ggcgctcaac atttccgccg atacggtcgt aatcaactct
     1021 ttttcgaagt acttctgcat gaccggctgg cgcatcggct ggatggtggt gccggaagcg
     1081 ctggtgaggc cgatcgagcg attgcagcag aacctcttta tctcggtacc gacgctctca
     1141 cagatggctg ccgaggcggc attcgatggg cgtgacgaga tggaggcggt caagcatggc
     1201 tacgaggtca accggcgcat cctgatggag ggcctgccgg gtgctggact cgaccaattc
     1261 ctccccgtcg acggtgcctt ctatctctac gccgatgtgt cgcatttttg cagcgacagc
     1321 ctggagttcg cgcgccgcat gctggaggag gcaggtgtcg ccgtgacccc tggcgccgat
     1381 ttcgacccgg tgcacgggcg acgtttcatc cggttctgtt atgcgggcgc gacggcagat
     1441 gtcggtgagg cggtggaacg gttgggcgcg tggctgaagc gacggtgaac tcaaaactcc
     1501 atatcgagtt cctccacctc gtccggctcg tttctggcag cctcgaccca ttcgtccata
     1561 tggggcattg ccatgatggt tcggcaatag gccgcacatt gcgggtcgag cttaacgcaa
     1621 taggtgagga aacggctgca caccggcgca tacatggcgt cggcaaggca tggttttgca
     1681 ccgaataggt acggtccgtt ggaggccgcc aggcagtcgc gccagattgt cacgacgcga
     1741 tcgatatcgg cctgggcgcc ggcaaagacc ttgaacgcgg ggtagtggcc cttgatgttc
     1801 atcggcaatg ccgagcgaag attgatgaag ccggaatgca tttcccccga gaccgcacgg
     1861 cagagcgcgc gcgctgcggt gtcttggggc agcagtcggg cctccgggaa tagttcgttg
     1921 agatattcgg cgatggccaa tgtgtcccac accttgacgg aaccgttggt cagcgacggt
     1981 accaggaatg agggcgacag cagcagcaac tcggcccgcg tggacgcgtc gtcggcggcg
     2041 gcaacctgct cctcgaaatc aagcccagcc attttgcata gtagccaacc gcgcagcgac
     2101 caggagccgt agttcttgct cgctatcatc agcttgggct tttccatcct cgccatccgt
     2161 taagcttgag ttagttcagc ccgactcgcg agtagacgaa atatgcaata ttttcaatgt
     2221 attgccgaga gggttcgacg cccgatattg ggctccatcg cggtcgcgcc ggcgtcttgc
     2281 agctgtgccg atcacaattt cgacgatgcg caaattcttg tcgcaccgca acaaaaacta
     2341 atttagcctt tcaccccaaa gaaatggatg gaggagcggg cacgacctcg catccacggg
     2401 gtgcaaatgc tctaccaggc ctatcaggcg catgccgact tcatggtccc ggtacgagcg
     2461 ttggcgtctc tggcgacaag ccgattaggc ccaccatttg gcgaaaatct cgggatcgtc
     2521 cgcaatctca cggcggccta tgagttgatc gcccgggccg gactcaccca tgaccgcccg
     2581 ccatttgaca tcaactccgt caccgtcgga aaccgcgagg tcgcagtgcg cgaggacgcc
     2641 gccctcgtta cgccgtttgg cacgctcctg catttcaaga aggatgtcga cgtggcgcag
     2701 ccgcgtgtac ttgtggtggc gccgctctca gggcatttcg caacgctgct gcgtgccacc
     2761 gtgaacacca tgctggccga tcatgacgtc tacatcaccg attggcacaa cgtgcgcgac
     2821 gttgcgctct cccatgggcg gttcggtttc gacgattata cccagcacct catagacttc
     2881 cttgagatca tcggacccgg cgcccacatg gtagcggtat gccaaccatg cgtcgccgcg
     2941 ctcgccgcaa cagccgtgat ggcgcaatcg cgtcatccgg cgcagccgcg cagcgtcact
     3001 ctgatggcgg gaccgatcga tgcccgcgtc aaccccacca aggtcaacga actggccaac
     3061 tctaggccga tttcatggtt tgagcagaat atgattgcaa ccgtgccgat gcgatttccg
     3121 ggggcgttcc gtcgggtcta tccgggcttt gtgcagcttg cggcgttcat gagcatgaac
     3181 atcgatcgcc acatcaaggc ccatcaagag ctctacgagc atctccgcga cggcgagatc
     3241 gagaaagccg agatcaccaa agccttctac gacgaatatt ttgccgtgct ggatcttacg
     3301 gcagagttct atctcgaaac tatccagatg gtgttccagc agcacgcgct gccgctcggc
     3361 aagctgaaat ggcgcggcga gacagtagaa ccgcgcgcca tccgccgtac catgctgctt
     3421 accgtcgagg gcgagcgcga cgacatctgc gcggtcggcc aaaccatggc ggcgcacgag
     3481 ctgtgcagcg gactgcggcc ctatctgcgg cgtcatcaca tgcaggccgg cgtcggccac
     3541 tatggggtgt tcagcggcca acggtggagc ggacagatct acccgatctt gcgcaatgtt
     3601 atcctttcca gtgagtgatc gtcgaaaagc atttttcggc gaagcggaca ccccgtgagc
     3661 ggcggcgcct cagctgcgag acattagagc agagcaaatt tctttgtgat cgaatcacat
     3721 cacacaacga cgtcatcgcc ggccaagacg ggcgacccgg taacccaggc gatgctgcgg
     3781 attactggat tgccgctttt gccggaatga cagcgcagaa ttgcacgcac aatgccggtt
     3841 gcttttcacc gagacccgcc atattaacgc gaccctttat cgtcggcctc ggctggtctt
     3901 cgcggcttga ggcttcaatt cgaacgccag cccgccgtgg cgatcgaata gcgtcggttc
     3961 ggccgttgtg tgcgcgccct cgatcgcgag caaccgacgc ttggtggcag cgccgcccgg
     4021 cgccgagaag ccgccggtct tgccgccggc cgccaccacg cgatggcacg gcacgatgat
     4081 ggggcagggg tttcggccca tcgcctcgcc gacaccgcgc gcgtccggct cgccgagttg
     4141 cgccgcgatg gcgccatagg tgagggttgt gccgggcctg atggtacgcg ccaccgcata
     4201 gacgcggcgg ttgaattccg gcacgccgtc gaggtcgagc acaatgttgg aaagatcatg
     4261 gtgctcgccg ctgaccaatg ccacgatgct gtcgatcgcc cgcgccacct gctcgggtgg
     4321 gtcggcttcg tggacgcctg ggtagcgccg cgtgagccgc gcccgcgtcg cagcggcgtc
     4381 gcgccctggt agctgcacgc cgacaacacc gcgttcactc cacgcaatcg cgcagccgcc
     4441 gatcgcggtg tcaaacagtg cgaagccgat agccgtcatc gaggtccaac cctaatacca
     4501 ccgagatatg ggccgaccct cgcttgcgca acgacacctc gaacctaatc aacgaatact
     4561 gcatctacat cgcgtcaact tttgtccacg agcatgcgct tcgcccacca gccggcgcgc
     4621 cgcggtgcgg tgggatcgga ggttgagggc ggcggtgcgg tcgtttcgac ctcgacaaca
     4681 ggggtaacga tcgccggtgc gggttgaggc gacgcggcgg cgctcccggc caggaatggc
     4741 gccggctcgc gcacggtcga acgccgtctc ggcgccgtgg gcttcagcgg cgcgaccggt
     4801 tcgctcacca tcgccgggac aggctctggt ttcgcttcgg gttggccgtc cgaatgatcg
     4861 ggggcgacaa ggtccggctc gcgcgatcgt tgctgtagcg ccggttcgac cggaggtccg
     4921 ccaaaatcgg ctactgcgtg ggcgacttct tcgtcaatcg gcgcaacgcc attctccggc
     4981 gggcttatgt cggcgtcatg ttcttcacgg cgagcgcgtc gaccgccacg ccggccgcgc
     5041 cggcggcgac gccgactgtc gccattcccg ttatcggccc tggtgtcacc cgcttcagtg
     5101 tcctcatcgc tgagatcagg gtccgcattg ccgctggcag gcccgctctc gtcgtcggcg
     5161 gcggccgggt gcgatggcgg ttgatcgtgc gaacgcgtgt aggacaccgc ccgcgcgcct
     5221 tcgccttcga atgtttcttc caggctcaga ccttcctcgc gggcctcgcc gcgccggccc
     5281 cgtcgtcgcc gtcgccgtcg gcgccgcgca cccccttcgc cattctcggc acgctcctca
     5341 ttggcctcga caggttcacc cggctcggca gtgtcggcga actcgctgtc ctcgtcctct
     5401 tcggtttcga cctcgtcgat cggttcatcg gactccccgg tttcctcaac agccaccggg
     5461 acgctcgtcg cccgcgcggc gagcgcccga gcctgctcaa gggtgtgcat ctgctcaccc
     5521 ttctcgataa cgaacggcaa ttgcccgctg atcgtggcat cggccgcaat cgtcacggag
     5581 atctggaaac ggtgctccag atcatacaga tgggcgcgct tgtgattgag cacgtacagg
     5641 gcgatctcgg cgcgggtacg gcccacgata ttatgggtag cgccacgctg gagcgtctct
     5701 tcgatcatgc gcaacagttg cagcgcaacc gacgataccg agcgtacatg gccagtgccg
     5761 ccgcaatgcg ggcatttgtc ggtcgagctt tccagtacgc tcgtgcggat gcgctggcgc
     5821 gacatttcca tcaggccgaa atgggaaatg cgaccgacct ggattcgggc tcggtcgttt
     5881 ttgagacagt ccttgagccg ccgttcgact gcacggttgt tgcgcttttc gtccatgtcg
     5941 atgaaatcga tgacgatcag ccctgcaagg tcacgcagac gcagctgacg ggcaatctcc
     6001 tcggaggctt caagattggt cttgagcgcc gtatcctcaa tgtggtgctc gcgagtggcg
     6061 cgccccgaat tgacgtcgat tgccaccagc gcctcagttt ggttgagcac gatgtagccg
     6121 ccggagcgca attggacgac cggtgagaac atggcgtcga gctgactctc gatcgcgtac
     6181 ttcgccagga tcggctggct gtcttggtaa ggcctcacgt tcttggcatg gctcggcatc
     6241 agcatgcgca tgaaatcgcg ggcatcgcga aaagcttcgt cgcccgccac catgacctca
     6301 tcgatgtctt tattgtagag gtcgcggatc gaccgcttga ccagcgagcc ctcctcgtag
     6361 acgagagtcg gcgcggtcga cttcagcgta aggtcgcgca ccgtttccca ggcgcgcagc
     6421 aaatactcga aatcgcgctt gatctccgtc ttggtgcgcg ccgcaccggc ggtgcgcagg
     6481 atcacgccca tgccctccgg cacctccagc tcctgcgcga tgtccttgag ccgcctgcgg
     6541 tctaacacgt tggtgatctt gcgactgatg ccgccgccac gcgcggtatt cggcatcagt
     6601 accgagtagc ggcccgcgag cgacagatac gtcgtcaacg ccgcgccctt ggtgccgcgc
     6661 tcctccttga cgacttgcac cagcatgatc tgccggcgtt tgattacttc ctggatcttg
     6721 tactggcgac ggtgacgcgg cgcacggtcc ggcacttctt ccatggcgtc atcgccgccg
     6781 accgattcaa ctatttcctc ctcatcaccc tcggcggact cgctttggcc gttggcctcg
     6841 tcgtcgtggt cctgctcggt agcctcaagg tcagtgacgg cgatgtcgcc ggcgtcgtcg
     6901 cgctcttcct ggccagccgt cgcatcgcca ggaactggcg cgtcgtcgtg ctccgggatg
     6961 gccgtatggt tgtcgaattc gttcgcttcg gtctcccggc ggtcttgttc ggtatgggcg
     7021 gtggcgttgg tgtgcgcccc agcgtctact cgcgtcacgt cgtcgtcgtt ggccgctgag
     7081 tcggtgtgtt cggcgggctc ccgatcgtgc cgttgcccgc cgctctccgg ttcgtagcct
     7141 tcgtccggat gcgtgggagt atcgggtcgg gcgtctgagg cttcgatcgg cgggacatct
     7201 gcgccgacca ggtcctcatc gatcggctcg ctcacaaccg tttcggtgtg gcgctcggcg
     7261 gcgcggtgac gagggggctg gcgccgcatg ccggcgcggc gatcagcttc ggcttccgcg
     7321 tcgcggtggg cgcgctcttc ctcgtcgatc aaagcctgtc gatcggcaac cggtatttga
     7381 tagtagtccg ggtggatttc gctgaacgcc agaaagccgt ggcgattacc accataatct
     7441 acgaaggcag cctgcagtga cggctcgacc cgcgtcactt tggcaaggta gatattgcct
     7501 ctcagttggc ggcgacttgc cgactcgaaa tcaaattcct caacgcggtt cccgcgcagc
     7561 acgaccaccc gagtctcttc ggggtgcgtc gcgtcgatga gcatcttgtt tgccattgac
     7621 atgtctctcg gcggcgcgcg gcataacgct cgtccggcgt ccatgacctt cggtccatga
     7681 agtgccgggg ggcgacgcaa tgcgcggcgc gcttcttagg agggggatcg cccgacaacc
     7741 acgcccgacc gggcaagcga ccgcttcctt gggcccttcg gccagacgag gagctgacgt
     7801 tgccaatgat cgccaacatg gcgcattcga cccttaaaag cagaggggca acgcgggacg
     7861 gcgtcgcctt cgggtatcgg ctgaagattc gcgtgatcgg ccgcacgacc caggatcgca
     7921 gccctgtcct ccttcaaatc ggaagcggac gtggccgccc atgctcccga tccgccacgg
     7981 atggattgat gggcagtttg tcacgacagt gggcggcatt gcccaaatgc gacagaacca
     8041 ggaccttcga accttcaggt gattcctttt aagcgccata tttaggcatg gcaagccgca
     8101 actgtaatac ccatgccctc agaacggcac cacagttatg gtaatatgca accgttttat
     8161 tgcacttata gcgtggccac agcagtttcc gtgtgaccct gttgaagatc gattaactac
     8221 gagcgcctat tggggtacaa ggagcccggg acaattgggc cggagaccaa gtggtagtct
     8281 gcatcctcgc acgcgcattg gctaagccga tgtcaaatct gggcccggcg aaggtgtcgg
     8341 ctgggcgtgc tgcggcgcac atagcggcgc gcatggttgc catggggcgg cagagcggcg
     8401 gtctcctggt ctcgatcatt gtgctggcga tcgcgctcga tctggcgtgg ccgctcaatg
     8461 ctcggtcgca gatgccactt ccgcttcccg ttccgctgcc agccgcggag gcgccaccga
     8521 tcgcaaccga tgcccgtttg gccggcgacg acaagcagac ccgattggtg attgatcttt
     8581 cgcgcaaaat cgatatgcgg gcattcaccc ttgcagatcc gtaccgggtt gtgatcgata
     8641 tcccgcaggt caatttccag cttccgccca ataccggcga ccgtggccgc ggcgtcatca
     8701 aggcgttccg ctatgggctg gttatgtcgg gcgggtcccg aatcgtcctc gatctcaccg
     8761 ggcccgtaag ggtcacaaag gcctttgtgc tcgatccggt ggatgggcaa ccggcccgaa
     8821 tggtgctcaa tctgacggcg gtcgaccgcg agacattcct gcgtgccgct gcgatcgaca
     8881 accacctgcc gcggccaccc gagccgccat cgcttgcgcg ccctgaccgt gaagagcata
     8941 cgaccgatcc ccggccgttg gtggtgctcg atcccggcca tggcggaatc gatcccggga
     9001 cgcgtgcgcc gagcggcgag cttgaaaaga acctcgtgct cgaattcacc tcgatgctgc
     9061 gcaacaagct ggagggtacc ggcaaatatc gcgtggtgat gacgcgcgcc gacgatacct
     9121 ttgtgcagct ctccgagcgg gtgcggttcg cccgccagcg gcaggcgcag cttttaatct
     9181 cgatccattg cgatgctctg gcgcggggca gcggcgaggc ggagggcgcc accgtctaca
     9241 cgctgtctga ccaggcctcc gatgccgaga cacaacggct ggccgatgcc gagaaccggg
     9301 cggatgtcat tgcgggcgtc gaccttgccg ccgaacccga tgacatcgca gacattctca
     9361 ttgatctcgc acaacgcgaa acgagatcct tctcggctca tttcgctcgc agcttggtga
     9421 atgagatgcg caccgcggca catttgcaca agcgtccgca taggtctgcc ggctttcgca
     9481 ttctcaaggc gcccgatgta ccctcggtgc tgatcgaact gggctacgta tcgaacgcgc
     9541 gggacttaaa gcagctggtt tctgaaagct ggcggtcgcg tacaagtgat gccattgtgc
     9601 acgcggtcca aacttatttt accacacggc ttgctggcgg cggcgcggcg cctgcccaat
     9661 gagagacgat ttacctgctg tgatgttttg cgagtgaggg cggcagagat gtatcttgcg
     9721 ggcgatccgc catttttgcc aaagtttgat cataaatgcg gcccacgaag tggatgtggt
     9781 ggcatgacgt tgcggtctgg tgcgactatt tacgtatcgg ggttagggct ttgggagtcc
     9841 ccgaaatgac gttcgggcgg agcgtgcggg cggggagccc gcgcagccga cttagtagaa
     9901 ttgagccggc gccgctggcg tttgtgagcg tgaccagctt gcgtctcgat gcgggtgata
     9961 gagtgggccg gtgatgcgat ttctgatcag gtttctcggc ttcctgtttg cgacgggatc
    10021 ggtcgtgctt ctggtcgccg ccggtgcttt tttcggcttg ctttatcatt tttccaagga
    10081 cttgccggac tattctcagc ttcaggatta tgagccgcca gtaatgacgc gggtgcatgc
    10141 ggccgacggt gagttgcttg ccgaatacgc caaggagcgc cggctttacc tcccgataca
    10201 ggcggtgccg aagctcgtca tcaacgcctt catttccgcc gaggacaaga atttctacga
    10261 gcatagcggc ctcgatgtcg gcggcatcgc ccgcgccggt tggctgtata tccagaatct
    10321 cggaagcaac cgccgccccc aaggggcctc cacgatcacc cagcaggtcg ccaagaattt
    10381 ccttctgacc aacgagctgt ccttctcgcg caagatcaag gaggcgctgc tggcgctgaa
    10441 gatcgagagc gcctacagca aggacaagat cctcgagctt tatctcaacg aaatctatct
    10501 cggcttcggc gcctacgggg tggcggcggc gtcgctcgtg tatttcgaca agccggtgaa
    10561 cgaactgacg ctggccgagg ccgcctatct cgccgccctg ccgaaggcgc cgagcacgct
    10621 gaacccgttc cgcgcgcgcg aacgcgccac cgagcggcgg aattacgtga tcgaccgcat
    10681 ggtcgagaac ggttacgtgt cg
//
LOCUS       DATILV010000318         2490 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3144711, whole genome shotgun sequence.
ACCESSION   DATILV010000318 DATILV010000000
VERSION     DATILV010000318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2490)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2490)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2490
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3144711"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..333
                     /locus_tag="VLJ17_07225"
     CDS             <1..333
                     /locus_tag="VLJ17_07225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HSV22805.1"
                     /translation="VELIDSARFLYAERPIPIDEKARPLLNPQACAIIAELLPDLSKV
                     EPWTAQATENIVRAFAERKDIKLGAVAQPLRAALTGRPTSPGIFEVLQVLGKQESLAR
                     LADHACGV"
     gene            602..1912
                     /gene="gltA"
                     /locus_tag="VLJ17_07230"
     CDS             602..1912
                     /gene="gltA"
                     /locus_tag="VLJ17_07230"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006466938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004108 - citrate (Si)-synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HSV22806.1"
                     /translation="MDARHGANTKSGTLTLGDKNYTFPVYEGTIGPDVIDISKLYAQA
                     DIFTYDPGFTSTASCESKITYIDGDKGVLLYRGYPIEQLAEHGDFLETCYLLLYGELP
                     TAAQKHDFDYLVTRHTMVHEQMSRFFQGFRRDAHPMAVMVGSVGALSAFYHDSTDISD
                     PMQRDIASIRMVAKLPTLAAMAYKYSIGQPFIYPKNDLDYASNFLRMCYAVPCEDYKI
                     NPVLARAMDRIFILHADHEQNASTSTVRLSGSSGANPFACIAAGCACLWGPAHGGANE
                     AALKMLAEIGKVSRIPEFIKRAKDKNDSFRLMGFGHRVYKNYDPRAKIMQKTCHEVLN
                     ELGIKDDPLLDVALELERIALHDDYFIEKKLYPNIDFYSGITLKAMGFPTAMFTVLFA
                     IARTVGWIAQWKEMIEDPSQKIGRPRQLYRGQTLREYPPISRRK"
     gene            complement(2043..>2490)
                     /locus_tag="VLJ17_07235"
     CDS             complement(2043..>2490)
                     /locus_tag="VLJ17_07235"
                     /inference="COORDINATES: protein motif:HMM:NF020130.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] synthase III
                     C-terminal domain-containing protein"
                     /protein_id="HSV22807.1"
                     /translation="SDGAGMPLLHQKAGGSRMPPTADTVARRLHYVHQEGAAVYKIAV
                     AKMVEVAADLITRNGLTASEVDWLVPHQANRRIIDATAERTGIPLDRVMITIHKYGNT
                     TAATIPLCLWDYESRLRPGDKLIMAAFGGGFTWAGAYLTWCYGAKA"
BASE COUNT          526 a          764 c          702 g          498 t
ORIGIN      
        1 gttgagctta ttgacagcgc tcgatttctc tacgcagaac gtccgatccc aatcgacgaa
       61 aaggcaagac cgctacttaa tccgcaagct tgcgccatta tcgcggaatt gctcccggac
      121 ctgtcaaaag tagagccttg gaccgcacag gcgacggaaa atatcgtgcg ggcgtttgcg
      181 gaacgcaagg atatcaagct cggcgcggtg gcacagccgt tgcgggcggc cttgacaggt
      241 cgccccacct cgcccggaat ttttgaggta cttcaggtgc tcggtaagca ggaaagcctc
      301 gcgcgccttg ccgatcacgc atgtggcgtg tgaacacttt cgcgtgaccc tcttgcggcg
      361 aacctaccgc agatacacta tgcacgccca gtttgcaccg aacaaataga agaaacggat
      421 acctgcgacg ccataaaaag cggcgtgctt tagcgagcaa cggacgatct tgcggcgcac
      481 aaactaatgc ggtacgcaaa cggaatatgc gcatagctcg gcggttatgg ggccagccgc
      541 cgttgcgccg gggaagtgat cagctgccgc agcgcggcgc catctcatcg aggaaaccag
      601 catggacgca cgtcacggtg ctaacaccaa gagcggcact ttgactcttg gcgacaagaa
      661 ttacacgttt cccgtgtatg aaggtaccat cgggccggat gtgatcgaca tctccaagct
      721 ttacgctcaa gccgatattt ttacctacga cccgggcttc acatcgaccg cgagctgtga
      781 atccaagatc acctatatcg acggcgacaa gggggtgctg ctttatcgcg gctatccgat
      841 cgaacaactt gctgagcacg gcgatttcct ggagacctgt tacctcttgc tttatggcga
      901 gcttccgacc gccgcccaga agcacgattt cgactatctc gtgacccgtc acaccatggt
      961 ccacgagcag atgagcaggt tcttccaggg attccgacgc gatgcccatc cgatggccgt
     1021 gatggtcggc tcggtaggag cgttgtctgc attttatcac gactccactg acatttccga
     1081 cccgatgcaa cgcgacattg cctcgatccg catggtcgcg aaactgccca cgcttgccgc
     1141 gatggcctac aaatattcga tcggccagcc gttcatttat cctaagaacg acctcgacta
     1201 tgcgtcgaac ttcctgcgta tgtgctacgc ggtgccgtgc gaggactaca agatcaatcc
     1261 ggtcttggcg cgcgccatgg accgcatttt catcctgcac gccgatcacg agcagaacgc
     1321 atcgacctcg acggtgcgat tatcaggttc ctccggagcc aatccctttg cctgtatcgc
     1381 ggccggctgc gcctgcctgt ggggcccggc gcatggcggc gccaacgagg ccgcactgaa
     1441 aatgcttgcc gaaatcggca aagtcagccg tatccctgag ttcatcaagc gcgcaaagga
     1501 caagaacgac agcttccgcc tgatgggttt tggccaccgg gtctacaaga actacgaccc
     1561 acgcgccaag atcatgcaga agacctgcca tgaagtgctc aacgaattgg gcatcaagga
     1621 cgatcctctg ctcgacgtgg cactcgagct ggagcggatc gcgctccacg acgactactt
     1681 catcgagaag aagttgtatc cgaacatcga cttttattca ggcattacgc tcaaggcgat
     1741 gggctttccg actgccatgt tcacggtgct tttcgcgatc gcccgcaccg tcggttggat
     1801 cgcgcaatgg aaggaaatga tcgaggaccc cagccaaaag atcggccgcc cacggcaact
     1861 gtaccgcggc cagacgctac gcgagtatcc accgatctcg cggcggaagt gagggcgtag
     1921 gagcctgccc ctcgacacaa caagggcggg taaaggcgcg tcgtcgcgcg atgccccacg
     1981 tggaaaggcc ccgtgtgcgc acgcttcgct ttgcccaccc gacaacctga tcggaatccg
     2041 cattatgctt tggcgccgta acaccacgtc aggtacgcgc cagcccaggt gaaaccgccc
     2101 ccgaacgccg ccatgatgag tttgtctcca ggcctgagac gactttcgta gtcccacaag
     2161 cacagcggga tcgttgcggc ggtcgtattg ccgtacttgt ggatcgttat catcacccgg
     2221 tcgaggggaa tacccgtccg ttccgccgtt gcgtctatga tccgccggtt ggcttggtgc
     2281 ggcaccagcc agtcgacctc gcttgccgtt agaccgttgc gtgtgatcag gtcggctgcg
     2341 acttcaacca tttttgccac cgcgatcttg tagaccgcgg cgccctcctg atgaacgtag
     2401 tgcagacgcc gcgcgaccgt gtcggcggtc ggcggcatgc ggctgccgcc cgccttttgg
     2461 tgaagtaacg gcatgccggc gccgtcggag
//
LOCUS       DATILV010000319         6586 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_74959, whole genome shotgun sequence.
ACCESSION   DATILV010000319 DATILV010000000
VERSION     DATILV010000319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6586)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6586)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6586
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74959"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(447..770)
                     /locus_tag="VLJ17_07240"
     CDS             complement(447..770)
                     /locus_tag="VLJ17_07240"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HSV22808.1"
                     /translation="MPIRFAAATALFMAIIVAVQAATITVGQHGLLLTQSSASLAKGD
                     RIIFTNEDDVIHNINIFGPGNDESTDLGLQKPGATLTYKFDKAGAYRVRCNIHPSVRM
                     AVTVK"
     gene            complement(808..2223)
                     /locus_tag="VLJ17_07245"
     CDS             complement(808..2223)
                     /locus_tag="VLJ17_07245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22809.1"
                     /translation="MITRDKTTALETSVTVGPGADRGSAAAVIFCGAGFSILLLLSAA
                     LGARQALAVPSFAIQTSQPCAACHIGSFGPQLTPFGRDFKLHGYVASDGKDHGLPLAF
                     TTQTSFTHTAVAQPGGAAPGFKPNDNVAVDQASLYYAGRITPQVGAFIEFMFDGVNQQ
                     PQLGNADIRYAREGQLFGQDVVWGITANNSPTVQDPWNSTPVWGFPYNQSALAPTPMA
                     APLVDGGLGQRVAGIGAYMLWNNLLYLEADAYKGLGPAALRMVGQVPIDGSDRTTAFM
                     PYARLAVIRDWQSHHVELGAYALSANVVPGDNQTFGLSTRKTDAALDANYQYISDPTK
                     VTSDRLSVHATYIHETARMEASEAQALTGALLDHSLDTMRVDISYSFAATVTPSVQYF
                     RTTGTADVNYWATTNGSPNSDGMILEVAYVPWGKPDSPFPNFNLRLALQYVNYFGFDG
                     SSTNARSNNNFFFSLWTAVKF"
     gene            2475..4754
                     /locus_tag="VLJ17_07250"
     CDS             2475..4754
                     /locus_tag="VLJ17_07250"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HSV22810.1"
                     /translation="MASAEIDAGTKNAFRRQLRAVAIGLLMVNLAVGLFARQQQHATI
                     DYAINIYDTAFISTNYVHLAQMSFQHYVDDRIRAAGPVQISQVNELLGNVLDEMDVAI
                     ERSSSPRSRAQGLEVRAKIAALRDIGTDAADLADRMTEIQQEMEQLGARNAAVGLKAR
                     DDIEEFSFKSDLLLLGSIVTSVMLAGLALLLLQRMINSLNQRSSAQLSAALEGMPQGL
                     SMFDDQSRLIVCNAHYAAMYGLRAEHIQPGTPLRTILQHRVETGTSPINVENFVEETL
                     ASASKRTLGVVELQLHDGRIISLINAPLSTGGEVMIHMDVTEKRNSEKQIAFLAHHDA
                     LTGLANRVQLREHIEKSLKHVERGERFSVLCLDLDHFKDINDTLGHSLGDALLCAVSR
                     RLRELVRDNDLVSRTGGDEFSIVQSGTGLPMAASAALAARVVEALSVPFDLGDHHVVI
                     GASVGVAIAPDDGNDADQLLKNADMALYRAKDDGRGGFHFFEPEMDAKAQARRILELD
                     LRKAVTAAEFEIFYQPIVNLTENRISGFEALLRWNHPTRGRVPPGEFIPLAEETGLIV
                     AIGEWVIRQACAEARAWPSDLRVAVNVSPVQFRNKSLVSTVVSALAASGLGSDRLELE
                     ITEAVLMHTNDATLAVLHQLRSLGVRISMDDFGTGYSSLSYLRSFPFDKIKIDQTFVR
                     DLIEKPDAIAIIRAVAGLGLSFGMTTTAEGVETQEQLDLMRAEGCTEVQGYFYSKPMP
                     ASEIAQLLSCFQKRAQAAA"
     gene            complement(5187..>6586)
                     /locus_tag="VLJ17_07255"
     CDS             complement(5187..>6586)
                     /locus_tag="VLJ17_07255"
                     /inference="COORDINATES: protein motif:HMM:NF025080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSV22811.1"
                     /translation="QLPFFIEYLKQGGLFEGWVSGCALYFSSPNAPTKRDVLGTVLLS
                     VLAGHWRYAHMTTLRCDPVNPPLLGMRKVVSEDAVRRGFDKIEEDAGSLWLQEHLEYC
                     TRPLLGEPWILDVDTTVKPLYGHQEGAVVSYNPHKPGRPSHSYHSYMLANLRLVLAVE
                     VQAGNHHTSKHSAPGLWRLVDGLSPTERPTLLRGDAGWGNEPIMREAEQRGQPYLFKL
                     RLTNGVKRAIERAMRTQDWHDAGAGWQGKEGELRLQGWSRQRRVVILRRRTERSLALV
                     ERDAMGQLALGFAEIDAGREVWEYAVLVTSLTSEVLTIGQLYRDRADCENGFDELKNQ
                     WGWGGFTTHDLKRCRLMAGCVALVFNWWNMFARLAEPDHHREAITSRPLLLQAIGRQT
                     NHAGRTTVTITSAHGEHHRARRALTRIAAFFAELRKTAEQLTAIERWYRILSQALIKY
                     LRGRQLRPPLVLQPP"
BASE COUNT         1350 a         1939 c         1982 g         1315 t
ORIGIN      
        1 tcgagctcgc gggccagcca gatgacacct gtcctgctca aaactccgaa ggccaaagaa
       61 atcctggaat ttctccacca tttcgagttt tgagcaggga cagcctccca ccttcatcga
      121 ccgaggcgcg ccactgtacg cgcatcgccg tgtggaccgg cattactcgt gacacaagac
      181 ccaactcgga cgccaaatgt gcatcgcagc agtcgaaaca atgttgattt gtgcggtgcg
      241 agagcgatcc cggtttacac cgcaaacatg ttggggaccg ctatgcgatc acctcgctgg
      301 caccgattcg agtccgcccc tcgaccagcg gcccgccgcc atggaaggat aaaacgtaac
      361 ggctcatcga aatccgtgca ttcgagagta ccgcatggtg attttcagaa tcgacacatg
      421 cgatcggagt ccccctccgc gtcgcttcac ttgacggtca ctgccatccg caccgacgga
      481 tggatgttgc accggaccct gtaagcgccg gccttgtcga acttataggt cagggtcgcg
      541 cccggcttct gcaggccaag gtcggtggat tcgtcattcc ccggcccaaa gatgttgata
      601 ttgtgtatga cgtcgtcttc attggtgaag attatccggt cgccctttgc cagcgacgcc
      661 gagctctggg tcaatagcag tccgtgctgt ccaacggtaa tcgtcgcggc ctgcacggca
      721 acgatgatcg ccataaagag ggcggtggcg gcagcgaagc gaatgggcat gacgaatcct
      781 gcgtcaaaga gtgggtgatc ggagcggcta gaatttcacg gcggtccaca gactgaaaaa
      841 gaagttattg ttgctgcggg cgttcgtgga gctgccgtcg aagccaaaat agttcacata
      901 ctgcaatgcc agtcgcaagt taaaattcgg aaacggcgaa tccggcttgc cccagggcac
      961 gtaggcgact tcgagaatca tgccgtccga gttgggactg ccattcgtgg tggcccagta
     1021 attgacgtcg gccgtgccgg tggtgcgaaa atactggacc gatggtgtga cagtggcggc
     1081 gaagctgtag gagatatcga cgcgcatcgt gtccagcgaa tgatcaagca acgcaccggt
     1141 tagcgcctgc gcctcgctcg cctccattct ggcggtctcg tggatataag tcgcatggac
     1201 ggagagcctg tcgctggtca ccttggtggg atcggatatg tactggtaat tcgcatcgag
     1261 cgccgcgtcg gtcttgcggg tgctaaggcc gaaggtctgg ttgtcaccag gaacgacgtt
     1321 ggcggacaat gcataggcgc caagctccac gtgatggctc tgccaatccc gaataacggc
     1381 aagccgcgca tagggcataa aggctgtggt gcggtcgctg ccgtcaatgg gcacctggcc
     1441 caccattctc agcgcggcgg ggccgaggcc cttgtaggcg tcggcctcca aatacagcag
     1501 gttgttccac agcatgtagg cgccgatgcc ggcgacgcgc tggccgagac cgccgtcgac
     1561 caggggcgcg gccatcggtg tcggcgccag cgccgactgg ttgtagggga acccccaaac
     1621 cggcgtcgag ttccaggggt cctgcaccgt cgggctgttg ttggctgtta tgccccagac
     1681 aacgtcctgg ccaaataact ggccctcgcg cgcatagcgg atgtcggcat tgccgagttg
     1741 aggctgttga ttcacgccgt cgaacatgaa ctcaatgaac gcgccgactt ggggcgtaat
     1801 tcgtcccgca tagtatagcg atgcctgatc gacagcgacg ttgtcgttcg gtttgaagcc
     1861 gggcgccgct ccgcctggct gcgcaaccgc ggtgtgggtg aaggacgttt gcgtggtaaa
     1921 cgccaaaggc agtccatggt ccttgccgtc gctggcgaca tagccgtgca gcttgaaatc
     1981 ccgcccaaag ggcgtcagtt gcggaccgaa cgacccgata tggcaggcgg cacagggttg
     2041 gctggtctga atcgcgaaag acggcacggc gagcgcctgt ctcgctccca gcgcggcgga
     2101 tagcagcagc aggatcgaaa accccgcacc gcaaaatata acggccgccg ccgacccgcg
     2161 atcggcgccc ggtccgaccg taaccgaggt ctcaagagcc gtcgttttgt ctcgcgtaat
     2221 caaggccgga agtcccctcg caagccgctt ttcgcggatt aatcagctcc aacaatagat
     2281 caaaacgtgg ttaacaacgg ttgaaggtga cttttccgca ccgacaaggg gggctcaatt
     2341 gcgtggctaa atcggccgcg ttgggtgtcc gccgaaactc cggcctattg gtaagagatg
     2401 tccacgttgc cttaatccaa agagtttatc gtgtagcgat atcccaatag cgtgcgagta
     2461 cggagtgtga cagcgtggcc tctgccgaga ttgatgcggg aacgaaaaac gcttttcgcc
     2521 gacagctccg agcggtggcg atcggcctgc tgatggtcaa tctggcggtc ggcctgttcg
     2581 cgcgccaaca acaacacgcg accatcgact acgccatcaa catatacgac accgcattca
     2641 tctccaccaa ctatgtccac ctcgcgcaga tgtcgtttca gcattatgtc gacgaccgca
     2701 tccgcgccgc agggccggtc cagatttccc aggtcaatga gcttctgggg aatgtgctgg
     2761 acgagatgga cgtcgcaatc gaaaggtcga gctctccccg ctcgcgcgcc cagggattgg
     2821 aagtcagggc gaagattgcc gcgctgcgcg atatcggaac cgacgccgcg gacctggcgg
     2881 atcggatgac cgaaattcag caggagatgg agcagttggg cgcgcgaaat gcggccgttg
     2941 gcctgaaagc tcgagacgac atcgaagaat tctccttcaa gtccgatctc ctgctgctgg
     3001 ggtcgatcgt caccagcgtc atgctggcgg gactggcgct gctcctgctc cagcgcatga
     3061 tcaattcgtt gaaccagcga tcaagtgccc aactctctgc ggctctggag ggcatgccgc
     3121 aggggctcag catgttcgat gaccagtcgc gcctgatcgt ctgcaatgca cactatgccg
     3181 cgatgtatgg acttcgtgcc gagcacatcc agccgggtac cccgcttcga accattctgc
     3241 agcaccgggt cgagacggga acatctccga tcaacgttga aaactttgtt gaagaaacgt
     3301 tggcgtctgc atctaaacga actcttggcg ttgtagagct acaattgcac gatgggcgca
     3361 tcatttcgtt gattaacgcg ccgctgagca ccggtggtga ggtcatgatt cacatggatg
     3421 tgaccgagaa acgaaattcg gagaagcaga ttgcgttctt ggcccatcac gatgcgctga
     3481 cgggattggc aaatcgcgtt caattgcgtg agcatatcga gaaaagcttg aaacatgtgg
     3541 agcgcggcga aaggttctcg gtgctgtgtt tggatctcga ccacttcaag gatatcaacg
     3601 acacgctggg tcactccctc ggagatgcat tgctgtgtgc ggtttccagg cgattgcgcg
     3661 aactcgtgcg cgataacgat ttggtctcgc ggacgggtgg cgacgagttc tcgatcgtgc
     3721 agtccggtac ggggctgccg atggcagcct ctgctgcctt ggcagcgcgc gttgtcgagg
     3781 ccttgagcgt gccgttcgac ctcggcgatc atcatgtcgt gattggcgcg agcgttgggg
     3841 tcgcgattgc gcctgatgac ggcaacgatg cggatcagct tttgaagaat gccgacatgg
     3901 ccttgtaccg ggcaaaggac gatggccgtg gaggattcca tttcttcgaa cccgaaatgg
     3961 acgccaaggc ccaggcccga cgcatccttg aacttgatct ccgcaaagcc gtcaccgccg
     4021 cagagttcga aatcttttac cagcccatcg tcaatctcac ggaaaatagg attagtggat
     4081 ttgaagcatt gctgcggtgg aaccatccaa ctcgtggcag agtcccgcca ggcgaattca
     4141 tcccattggc tgaggaaaca gggcttattg ttgcgatcgg cgagtgggtg atccggcaag
     4201 cgtgtgccga ggccagggca tggccatccg atctgcgggt ggcggtcaat gtttcgccgg
     4261 tgcaattccg taacaagagc ctggtttcca ccgttgtgtc cgccctggcg gcctctggct
     4321 taggttcaga tcggttagag cttgaaatca ccgaagccgt tttgatgcat accaatgatg
     4381 caacactggc ggtgctacac cagttgcgca gcctgggcgt caggatatcg atggatgact
     4441 tcgggaccgg atattcgtcg ttgagctatc tccgtagctt cccattcgac aagatcaaga
     4501 tcgaccagac ctttgttcgg gacctcatcg aaaagcctga cgccatcgcc atcattcgcg
     4561 ctgtcgcagg gctcggcctc agcttcggca tgaccacaac ggcagaaggc gtcgaaactc
     4621 aggagcagtt ggatctgatg cgcgcggagg ggtgtaccga ggtgcaggga tacttctaca
     4681 gcaagcccat gcccgccagc gagattgccc aactgctatc ttgcttccag aaacgagcgc
     4741 aagccgcggc gtagtcgcta gcagcggaac ggcctacggg gtggccggtg tcgctgagct
     4801 ggtagagcga cgaaatgatc gagccggact tggctgatga cggctattgg tctttcggcg
     4861 gtcggtctta tattaatgaa agcgatcaag gtaatgtggc tgcggccaac ctctctgagc
     4921 ggaccgaatc accgcctcgc cagattcgcc tcgccgtagc accgtcggtg acaaagacaa
     4981 tgccgccgat tgcacaggct gcgagatctg agcaccggat cgatcatctt ggtgcacggt
     5041 actggcatgc ggctcaagag ctacaggctc agcttcgata acgctaattt agagcgcgtt
     5101 gcgctcacgt tgaatcatcc taaatccgtg agttggaccg acgaaattgt cctgaccgat
     5161 ggctcattca acctttgcgc gtggcctcat ggcggctgaa gaacgagcgg cggccgcagt
     5221 tggcggccac gcaggtactt gatcagagcc tggctgagga tgcggtacca acgttcgatg
     5281 gcagtcaact gctccgcagt tttccgcagc tcagcaaaga aggcagcgat gcgcgtcagc
     5341 gcgcgacgcg cacgatgatg ttcgccatgg gcgctggtga tcgtcaccgt ggtgcggccg
     5401 gcgtggttgg tttgtcggcc gatcgcctga agcagcaacg gccggctggt aatcgcctcg
     5461 cgatgatggt cgggctcagc cagacgtgcg aacatgttcc accagttgaa caccagcgcg
     5521 acgcagcccg ccatcaggcg gcaacgcttg agatcatgcg ttgtgaatcc gccccagccc
     5581 cattggttct taagttcgtc gaagccgttt tcgcaatcgg cacgatcgcg atagagctgg
     5641 ccgatggtca ggacctcgga ggtcagcgag gtcaccagaa ccgcatattc ccagacctcg
     5701 cggccggcat cgatctcggc aaagccgagc gccaattggc ccattgcatc gcgctcgaca
     5761 agcgccagcg agcgctcggt ccgccgccgc aggatcacga cgcgacgctg ccggctccag
     5821 ccctgcaggc gcaactcgcc ctccttgccc tgccagccgg cgccggcatc gtgccaatcc
     5881 tgcgtgcgca tcgcacgctc gatcgcacgc ttcaccccat tagtcaggcg caacttgaac
     5941 agataaggct ggccgcgttg ctccgcttct cgcatgatcg gctcgttgcc ccagccggcg
     6001 tcgccgcgga gcaacgtggg cctttccgtc ggcgaaagcc cgtctaccag ccgccacagg
     6061 cccggcgccg aatgcttcga cgtatgatga ttgccggctt gcacctccac cgccaggacc
     6121 agccgcaaat tggcgagcat gtagctgtga tagctgtgcg agggacgccc cggtttatgc
     6181 gggttgtagc tcaccaccgc tccttcctga tggccataga gcggcttcac agtcgtgtcg
     6241 acatcaagta tccacggctc accgagaagc ggccgcgtgc agtactcgag atgctcctgc
     6301 agccataatg atccggcgtc ctcctcgatc ttgtcgaagc cgcgtcgcac cgcgtcctcg
     6361 ctcaccacct tgcgcatccc aagcaatggc ggattgaccg ggtcgcaccg caacgtcgtc
     6421 atgtgcgcgt agcgccagtg tccggccagc accgacagca gcaccgtccc cagaacatcc
     6481 cgcttggtcg gtgcgttcgg actgctgaag tacagcgcgc agcccgaaac ccagccctca
     6541 aacagtccgc cctgcttcag gtactcgatg aaaaacggaa gctggc
//
LOCUS       DATILV010000320         1601 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_75127, whole genome shotgun sequence.
ACCESSION   DATILV010000320 DATILV010000000
VERSION     DATILV010000320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1601
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75127"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            41..1327
                     /locus_tag="VLJ17_07260"
     CDS             41..1327
                     /locus_tag="VLJ17_07260"
                     /EC_number="3.4.22.-"
                     /inference="COORDINATES: protein motif:HMM:NF012862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008234 - cysteine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="caspase family protein"
                     /protein_id="HSV22812.1"
                     /translation="MLRCVFVAIGVLSSFVEAYAGGRVALVAGVSNYEHAGRLVSTLN
                     DAKDMTAALKRLGFDVETLLDPSRSALEAAIRRYGYRSVGADVSLFHFSGHALESAAQ
                     NWLLPATANVGTERDLRFEAVDLKTIQEQTDGARVSIVFLDACRDNPFARRLSGARRD
                     VSAPGLARVDVAGGGMVVVFSTAPGQVALDNISAKRNSPFTAALLNHIETPGLEIKSL
                     LALVTKDVVEETKGVQRPWLNSSLEGDFYFLPPAVAAPSAQSAMTLDGMFWDSIKASR
                     NPADFKAYLAKFPKGVFVELAQNRLATLQQEVAPRPETQNSPPAPQPAAVPPPADRNE
                     ATGLIERAHTLVSLGDIVSARLLLRRAYEYGDPRAALEMGETFDPLVLKRFNNNATII
                     NLYADATQARNWYKRAADLGSIDAVQRMRELALLDR"
     gene            complement(1331..>1601)
                     /locus_tag="VLJ17_07265"
     CDS             complement(1331..>1601)
                     /locus_tag="VLJ17_07265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018647596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HSV22813.1"
                     /translation="TVEGIAPSPDKLHPLQQAFHENHGLQCGFCTPGILTTLLEFLHD
                     NPDPTEREVRIAISGNLCRCTGYQNIVISALDAAKRLRAEAGQNA"
BASE COUNT          327 a          460 c          495 g          319 t
ORIGIN      
        1 gtctgattga gtatgagccg aaatttagag gtgtcggcaa atgcttcgat gcgtttttgt
       61 cgcgatcggc gtcctttcat ctttcgtaga agcgtatgca ggaggccggg tcgccctcgt
      121 agctggtgtt tccaattacg aacacgctgg acgcttagtc agtacactta atgacgcgaa
      181 agatatgacc gcggcgctaa agcggctggg cttcgacgtt gaaacgcttc tggaccccag
      241 ccgatccgcg cttgaggcgg cgattcgtcg atatgggtat cggtccgtcg gcgccgatgt
      301 gagcctattt cacttttctg ggcatgcgct tgagtcagca gcacagaact ggctgctgcc
      361 cgccacagcg aacgttggga ccgagcgtga cctgcgcttc gaggcagtcg atctgaagac
      421 aattcaggag cagactgacg gagcaagggt ctcgatcgtc tttctggatg cgtgccgcga
      481 caatccgttt gccagacggt tgtcgggagc gcggcgagac gtgtcggcgc ccgggctggc
      541 acgggtagat gtggcgggag ggggtatggt ggtggtgttc tcgaccgcac ccggacaggt
      601 cgcgctcgac aacatcagcg ccaagagaaa cagtccgttc acggcagccc tgctgaacca
      661 catcgaaacc ccaggacttg aaatcaagag cctcttagcc cttgtgacca aggatgtggt
      721 cgaggaaacg aagggggtgc aacgcccgtg gctaaattca tcgctggagg gcgacttcta
      781 tttcttgccg ccggcggtcg ccgcaccgtc agcccaatca gccatgactc tggacggcat
      841 gttctgggat tcgatcaagg cgagccgcaa cccggctgac ttcaaagcct atctggcgaa
      901 attcccgaaa ggggtattcg tcgaattggc gcaaaaccgc ctggcaacgc tgcaacagga
      961 ggtcgcacct agaccggaga cccaaaactc gccgcccgcg ccgcagcccg ccgcagtacc
     1021 cccgccggcg gatcgcaacg aggccacagg cctgattgag cgtgcgcaca ccctggtctc
     1081 ccttggcgac atcgtttcag cgcgactatt gttgcgccgg gcgtacgaat acggcgatcc
     1141 gcgagccgcg ttggaaatgg gtgaaacttt tgatcccctc gtgctgaaac ggttcaacaa
     1201 caatgccacg atcatcaatc tctacgccga cgcaactcag gcacgcaatt ggtataaaag
     1261 ggcagccgat ttgggctcca tcgacgcggt ccaacggatg agggagcttg cgctcctcga
     1321 ccgttgatgt tcaagcattc tgccccgcct cagcccgcag gcgcttggcg gcatcgagcg
     1381 ccgagatcac gatgttctgg tagccggtgc agcggcacag gttgcccgaa atggcgatgc
     1441 gaacctcccg ctcggtcggg tccggattgt cgtgcaggaa ttccaacagc gtggtcaata
     1501 tgccgggcgt gcagaagccg cattgcaggc catgattctc gtgaaacgcc tgttgcagag
     1561 gatggagctt gtcggggctc ggtgcgatac cctcgacggt a
//
LOCUS       DATILV010000321         9673 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4930622, whole genome shotgun sequence.
ACCESSION   DATILV010000321 DATILV010000000
VERSION     DATILV010000321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9673)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9673)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9673
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4930622"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            158..784
                     /locus_tag="VLJ17_07270"
     CDS             158..784
                     /locus_tag="VLJ17_07270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22814.1"
                     /translation="MPQTANTLPPGQIHPAVPPPTVGFAVTSGSTLAPAPTYTGAIAS
                     PAAADANGTLTAVHPFPGQPPHPVAAADPWSAALTHRNGVKASPASVPIPAAFRSNPL
                     MMTGIFAMPVESGASTAEFAIDLGAAPTIEALRARWNELRISQSPLLDNLKPLIALKD
                     GSKSGQELHLVAGPLTNNSAAHRLCAVLVGTSALCQPTMYEGQRLVAR"
     gene            876..1274
                     /locus_tag="VLJ17_07275"
     CDS             876..1274
                     /locus_tag="VLJ17_07275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22815.1"
                     /translation="MLDSSDLQHRLFRPSAASLNWVIAIGFVSLGYAMYMRYLVIEQT
                     QIGLACDTGLRTWQCLSRTVVTAFFENEVFGWVSLGAAVLTIIRPVLPLFTIGLAASA
                     FGIVLHNAGLSGLAAALLIMCFARPVVDQV"
     gene            complement(1237..2844)
                     /locus_tag="VLJ17_07280"
     CDS             complement(1237..2844)
                     /locus_tag="VLJ17_07280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-(1-6) glucans synthase"
                     /protein_id="HSV22816.1"
                     /translation="MRKLVALFLLTAAAVAVAWWWLGRPLGAPAAAADPGRIQCISYA
                     PFRGSQSPLIAATHAEAAQIEEDLAKLARLTGCVRTYATDNGLEQVPAIAQRLGLKVL
                     QGLWLGRDRQKNRIQIDTAVALAKRHPDAIIGIVVGNEVLLRGELAAEDIASVLREVK
                     AATEMPVTYADVWEFWLRNRDLAAVVDFVTIHILPYWEDFPIAADIAAAHVDDIHSRV
                     AAIFPGKEILIGEVGWPSAGRMREGALPSRSNQAHVLAEVMARARAKNYRVNLIEAFD
                     QPWKRHLEGTVGGYWGLLGSDIREPKFTWGEPVSDHPMWRWQLALGLTMVAVVFAAVI
                     GTGGDRTIAKTSAHVPVGIAVIGLAAGIAAPWALENVAIESLGPGGWIRGAAFAVVAL
                     TAPVAAAITLAANVTLPAFARVLGRPGQQPQSGAARVSGLVLVATTVLAIQTALGLVF
                     DPRYRDFTDAQLSAAVVPFAIATALGARGVGARGRAETIAAVTLTGSAAYIILNEGFA
                     NWQALWFGAVLVLLAVTLDRLRGAQST"
     gene            3234..3707
                     /locus_tag="VLJ17_07285"
     CDS             3234..3707
                     /locus_tag="VLJ17_07285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-1-3, beta-1-6-glucan biosynthesis protein"
                     /protein_id="HSV22817.1"
                     /translation="MFRVVWRCLAIIIGAATLAAAPLRAQNAEQKPAERGKGEPAKDA
                     AGPTDEVIEAGRVMTGPAARGECVWLGERAVRLMWNDDLDTAFRHLELYDRFGCPGEH
                     VQISFRCVVRQGNIDQKDQKTPNAFESRVHSCWMNPALSPVPPSQPAPVEKPATK"
     gene            3912..6815
                     /locus_tag="VLJ17_07290"
     CDS             3912..6815
                     /locus_tag="VLJ17_07290"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSV22818.1"
                     /translation="MRSVAVVVALVACLHAGAWGVRQTQATAPNFEGILNSVSYSPFT
                     TSAHPDHEGSRPPEERIRADLKAIAPYTRAIRLYSSTGGVEQVPKIAAEFGLKVTLGI
                     WLEKSEKSEKRGEKEPRAEFDPECKTRFKQDLIGVLNVPCNSRNIREITSALDLLRKN
                     RNVNAIMVGNETLLRHDLTADQLAEVIKLVKRQVGGAVPVSTGEIYSELCEECGKGPG
                     DKNAAQPKPSNEPNLFQRLTGSAADPQTPKERALAAERLVSTLDFVAAHVLPYWGGIP
                     ADNAVDATVDIYKDLREKFKGKRVVIAEFGWPSSGYNRKGAVPGKFEQAGIMREFVAR
                     AHALGIDYNLIEAYDQPWKTVEGSVGAYWGLFDNQTRQPKFGWAGPVTEADNWKIVAV
                     AVAIGVLLSLPALGIAGVTVGQALLLVSAAHAVGAWGAILFDYWNSHYFVVGAAFALA
                     LGTVLLIPLVLIALGRIEEIAGILFGRSPMRLLRASGSAPAPAYAPKVSIHIPACREP
                     PEMLKATLDAVARLTYPNFECIIVINNTPDAAMWEPVEEHCRTLGERFRFVNVPRLEG
                     YKAGALRLALAQTSPDAEIIGIVDADYAVTPDWLTDLVPAFADAKVGLVQAPQDHRDG
                     GRSPLHYTMNGEYAGFFDIGMVQRNEANAIIVHGTMCLIRRAALEAAGGWSSDTICED
                     TDLGLTILELGWQAHYTNRRYGYGLLPDTFEAYKKQRDRWASGGFQIVKKHWRRFLPG
                     VSELTSDQKREFAFGWLNWLGAESVGVLVAILNLIWVPVVAFAGIAVPDKVLTLPILA
                     TFVVSVVHFVALYHRRVPIPASQAAGAMVAAMAMQWTVARAVANGVVKDHLTFVRTAK
                     GGVARKRVVFPAFEEAVLGGLLALGAIIVFATNWERVREINLFGCILVVQSLPFLAAA
                     ALAAFENSRLNDFVLLRSLEDRLAEVISQVVPVRRNPIRQAAAVPEKHMEAAQ"
     gene            complement(6819..7988)
                     /locus_tag="VLJ17_07295"
     CDS             complement(6819..7988)
                     /locus_tag="VLJ17_07295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20 aminoacylase family protein"
                     /protein_id="HSV22819.1"
                     /translation="MPIVNRVADLQGQITTWRRDIHAHPELLYDVHRTAGTVAEQLTA
                     FGCDEVVSGIGRTGVVGVIKGDRPGGTRKVIGLRADMDALPIQEANDFPYKSTVPGKM
                     HACGHDGHTAMLLGAAKYLAETRNFAGTAVVIFQPAEEGGAGGLAMIRDGLMERFAIE
                     EVYGMHNFPGLPTGEFSIRSGPIMAATDNLTVEIEGVGGHAARPHIAIDPILVGAQMV
                     NQLQTIVSRNVDPVEAAVVSICTFHAGSADNVIPQTALLRGTARSLKPEVRERLRTRI
                     AEIVDGAARLYGAKANFTLRRGYPVLSNHERETAFAATVASDIVGTDRVNTDMAPVMG
                     GEDFSYMLEARPGAFIFVGNGDSAGLHHPGYNFNDDVIPYGTSYWVRLVETAMAG"
     gene            complement(8272..9417)
                     /locus_tag="VLJ17_07300"
     CDS             complement(8272..9417)
                     /locus_tag="VLJ17_07300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018268681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISAs1 family transposase"
                     /protein_id="HSV22820.1"
                     /translation="MVSDGARLAEIAETTSFLHYFSGLPDHRQAGKVDYPLPEILLLI
                     LLAVLAGAETFTDIARFGERKIELLRRFRPYVNGTPSHDHLGDIFATLDARAFQLCFV
                     AWVAALTNTPAEVIAVDGKTSRRSYQTKGSKEAIHMVSAFAARQRIVLGQVKVNEKSN
                     EIVAIPALLDMMSIEGAVVTIDAMGCQRNIAAKIIEKKADYILALKGNQGTLREDVEV
                     FVDEQKALKYKDTTISTHQTVDADHGRIETRNYTVIHDVDWLQARHEWPGLKAVVVVE
                     SQREINGKITDETRFYITSLVMLANAVGPMIRAHWAIENSLHWVMDMVFRDDECRVRT
                     DNAPANFATCRHIAYNLTRKAPGKDSIRLRRKTAGWDDEYLASLVAA"
BASE COUNT         1763 a         3073 c         2965 g         1872 t
ORIGIN      
        1 ggcggcagcg gctgccgcgg cgtcgagcaa ggctatgcag ccgaaatccg atttgccgga
       61 aagtgcgccg ccgatggcgg ccgctccggc gccggccgtg gctcccccgc cgccggccgt
      121 agcccccccg ccgccttcac cggtggggcg gacgcctatg ccgcagaccg ccaacacgct
      181 tccgcctggc cagattcatc cggcggttcc tcctcctacg gtcggtttcg cggttacgtc
      241 aggcagcacc ctggcgccgg cgccgactta cacgggagcg atcgcgtcgc cggcagccgc
      301 ggacgccaac ggcacgctca cggccgtaca cccgttcccg gggcaaccgc cgcaccctgt
      361 ggccgcggct gatccgtggt cggcggcgct cactcatcgc aacggtgtca aggcgtcgcc
      421 cgcctccgtc cctatccctg cggcgttccg atcgaacccg ttgatgatga cgggaatttt
      481 cgcgatgccg gtggagtcgg gcgctagcac ggccgaattt gccatcgacc ttggcgctgc
      541 cccgaccatc gaggcgttgc gcgcacgttg gaacgagctg cggattagcc agtcgcccct
      601 gctcgacaac ctgaagccct tgatcgccct caaggacggc tcaaaatccg gccaggagct
      661 gcatctcgtc gccggcccct tgaccaataa ttccgccgct caccgcctgt gcgctgtgtt
      721 ggtgggaacc agcgcactct gtcagccgac catgtacgaa ggccaacggc tggtagcacg
      781 gtgacgtctc catccgaaga aggcatgcgt tcgtccctca tgaaaacgat cgatctgcct
      841 tgcgtcccgc gcggtcaagc gtcacaaagg gcccaatgct cgacagctcc gacctgcagc
      901 accggctgtt ccggccctcg gccgcatcgc tcaactgggt gatcgcgatt ggcttcgtgt
      961 cgctgggtta tgcgatgtat atgcgctatc tcgtgatcga acagactcag atcgggcttg
     1021 cctgcgatac cgggctcagg acttggcaat gcctcagccg tacggtggtg acggcgtttt
     1081 tcgaaaatga ggtgttcggc tgggtcagcc tcggtgccgc ggtgctgacc ataatccgac
     1141 cggtgctgcc gttattcacg atcggccttg cggcaagcgc cttcggcatc gtgctccata
     1201 atgccggtct gtcaggcttg gcggcggcgc ttcttatcat gtgctttgcg cgccccgtag
     1261 tcgatcaagt gtgacggcca gcaggaccag aacagccccg aaccacaacg cctgccagtt
     1321 ggcgaaacct tcattgagaa taatataggc tgcagagccg gttaatgtga cggcggcgat
     1381 tgtctcggca cggccgcgag ctccgacgcc gcgggcgccg agcgccgtgg cgatggcgaa
     1441 cggaaccact gcggcggaaa gctgcgcatc ggtgaaatcg cggtagcgcg gatcgaacac
     1501 caggcccagc gcggtctgga tcgccaggac cgtggtggcg acgagcacaa gtccgctcac
     1561 gcgtgcagcg cctgactgcg gttgctgccc gggtcgtccc aagacacgtg cgaaggccgg
     1621 gagcgtgacg ttcgcggcaa gcgttatggc ggcggcgacg ggcgccgtca gcgccaccac
     1681 cgcgaaagcc gctccgcgta tccagccacc cggcccgaga ctttcgatcg ccacattttc
     1741 cagcgcccat ggggctgcga tgccggccgc gagcccgatg accgcaatcc ctaccggcac
     1801 gtgcgcagaa gtttttgcga tcgtccgatc gccgccggtg ccgattactg cagcgaaaac
     1861 gacggccacc atggtcaatc ccagagccag ctgccaccgc cacatcggat ggtcggagac
     1921 cggctccccc caggtgaatt tcggctcccg gatatcgctg cccagcagtc cccaataccc
     1981 gccgactgtg ccttcgaggt gccgtttcca cggttggtcg aaggcttcaa tcaggttgac
     2041 ccgataattc ttggcccgcg cccgcgccat cacctccgcg aggacatgag cctggttcga
     2101 tcgtgacggc aaagcgccct cgcgcatccg cccggcgctc ggccacccca cctccccgat
     2161 taggatttcc ttgcccggaa agatcgccgc gacgcggctg tggatgtcat ccacgtgggc
     2221 ggctgcgata tcggccgcaa ttggaaagtc ttcccaatag ggaaggatgt gaatggtgac
     2281 gaaatcgacc actgcggcga gatcgcgatt acgtaaccag aattcccaga catccgcgta
     2341 ggtcacgggc atctcggttg cggctttgac ctcccgcaac accgatgcga tgtcttccgc
     2401 cgcaagctcg ccgcgcagca acacctcgtt gcctacgacg atcccgataa tcgcatccgg
     2461 atggcgcttg gcgagtgcta ctgcggtgtc gatctggatg cggttcttct gccggtcgcg
     2521 accgagccac aggccttgaa gtaccttgag gccgaggcgc tgggcaatcg ccggcacctg
     2581 ttcgagccca ttgtcggtcg cataagtgcg cacgcacccg gtaaggcggg cgagttttgc
     2641 aaggtcctct tcgatctggg cagcctccgc atgggtggcg gcgatgagcg gactctggct
     2701 gccacgaaac ggcgcatagg agatgcattg aatacggccc ggatcggcgg cggcggccgg
     2761 cgccccgagg ggccggccga gccaccacca cgccaccgcc accgcagctg ctgtaaggag
     2821 gaatagtgcg accagctttc gcatggcggt cccatggaag gttacttaag acggcgtctg
     2881 attggataat ccgaagctgg tcgcgttgtt atgccttcga tacgtttttt acgaatgcgg
     2941 atcagcgcgt gtgagaatgc tccgggcgca gtcatagcat cggcgcatcg tgacgcaatc
     3001 gccgcattct aatttcgcgt gactgagctg cacactggcg cgccacataa cgccgcacgt
     3061 gcgcggcgtt cagggcgggc gcgatcgatt gcggtgcgct acgactggac aaaatccgcg
     3121 agttcggcca ttgacgggta gaagatttgg gcccgtaatc tgacatgctg agcagagcgc
     3181 ctgcgcagaa atccactccc agtcagcttc gacagaaaat cgatcgtgcg accatgttcc
     3241 gtgtagtttg gcgttgcctt gcaattatca tcggtgcggc gacgctcgca gccgccccgc
     3301 tccgtgcgca gaatgcggag cagaagccgg ccgagcgcgg caagggcgag cccgccaaag
     3361 atgccgcggg ccccaccgac gaagtcatcg aggcgggccg cgttatgacc ggcccggcgg
     3421 cccggggaga atgcgtctgg ctaggcgagc gcgcggtccg cctaatgtgg aacgacgacc
     3481 tcgataccgc gtttcgtcat cttgaactct atgaccggtt cggctgcccg ggcgagcacg
     3541 ttcagatcag cttccgctgc gtcgtgcgcc agggtaacat cgaccaaaag gatcagaaaa
     3601 cccccaacgc gtttgagagc cgcgtccatt cctgctggat gaatcctgct ctttcgccgg
     3661 tcccgccctc gcaaccggcg ccagtggaaa agccagcaac caaataaacc gggcgataac
     3721 cacgcgcgcg gattttattg cccctggtat atattgtcgc agtagctctg ccctgaaaac
     3781 gccacgtcgt ttgcatactt gaaaacaagc gatgctctgc tatgttttgt atcgccttca
     3841 gcccccgcga ccgtgcctag gggtcaggcc ccggtctaac aattttcccg ccccattcgg
     3901 tctagcgttc tatgcgctcc gttgctgttg tagtcgcgct cgtggcgtgc ctgcacgctg
     3961 gcgcttgggg tgttcggcaa acccaagcca cggctcccaa tttcgaggga attctgaaca
     4021 gcgtttcata ttcgccgttc accacctcgg cccatcctga tcacgaaggc agccgcccgc
     4081 cggaggagcg cattcgcgct gacctcaagg cgatcgctcc ttatactcgg gcgatccggc
     4141 tgtattcgtc gaccggcggc gtggagcagg tcccgaagat tgctgcagaa ttcggcctta
     4201 aggtcacgct cggcatctgg ctcgagaaga gcgagaagag cgagaagcgc ggcgaaaagg
     4261 agccccgtgc ggaattcgac cccgagtgca agacccgttt caagcaagac ctgatcggcg
     4321 tgctcaacgt cccatgcaat agccgcaaca tccgggaaat cacctccgct ctcgacctcc
     4381 tgcgcaagaa ccgcaacgtc aacgccatta tggtgggcaa cgaaacgctg ctccgccacg
     4441 acctgacggc cgaccaactt gccgaagtca tcaaactggt caagcgccag gtgggcggcg
     4501 cggtaccggt gtcgaccggc gaaatctata gcgagctttg tgaagaatgc gggaaaggtc
     4561 ccggtgacaa gaatgcggct cagcccaagc caagcaacga gcctaatctg ttccagcgac
     4621 tgacgggcag cgcagccgac ccgcagacgc ccaaggagcg cgctctcgcg gcggaacggc
     4681 tggtctctac cttagatttt gttgccgcgc atgtgctgcc ctactggggt ggtataccgg
     4741 ccgacaacgc ggtcgacgcg accgtggata tatacaagga tttacgtgag aaattcaaag
     4801 gcaagcgcgt cgtcatcgcg gaattcggct ggccgagttc cggctacaac cgcaaggggg
     4861 ccgttcccgg caagttcgag caggctggca tcatgcggga attcgtcgcc cgtgcccacg
     4921 cacttggcat cgactacaac ctgatcgaag cctacgatca accctggaag acggtcgagg
     4981 gcagcgtcgg tgcttactgg ggcctatttg ataatcagac ccgccagccg aaatttggct
     5041 gggccggtcc ggtcacagaa gccgacaact ggaagatcgt ggccgtcgcg gttgcgatcg
     5101 gggtgctgct ctcgcttcct gcactcggca tcgccggcgt caccgtcggt caggcgctct
     5161 tgcttgtttc cgcggctcat gcggtcggcg cctggggtgc gattctgttt gattattgga
     5221 acagccacta cttcgtcgtc ggtgcagcct ttgcgctcgc actcggcacc gtgctgctga
     5281 ttcccctggt gttgatcgcg ctggggcgga tcgaggagat cgccggcatc ctgttcggcc
     5341 gctcgccgat gcggctattg agggcaagcg gcagcgcccc tgcgcccgcc tacgccccca
     5401 aggtttcgat ccatatcccc gcctgccggg agcctccgga aatgctcaag gcgaccctcg
     5461 atgcggtcgc ccggcttact tatcccaact tcgaatgtat catcgtcatc aacaacaccc
     5521 ccgacgcggc catgtgggaa ccggtcgagg agcattgccg gacgctcggc gaacgcttcc
     5581 gtttcgtcaa tgtacccagg cttgagggct acaaggcagg tgcgctccgg ctggcgctgg
     5641 cgcagacttc gcctgatgcc gaaataattg gcatcgtcga tgctgattat gcggtgactc
     5701 ctgattggct caccgacctg gtgccggcgt ttgccgacgc taaggtcggg ctggtgcaag
     5761 cgccgcagga tcaccgcgac ggcggccgca gtccgctcca ctatacgatg aacggcgaat
     5821 atgccggctt cttcgatatc ggcatggtcc agcgcaacga ggccaatgcg attatcgttc
     5881 acggcacgat gtgcctcatt cgtcgcgccg cactggaggc cgctggcggc tggtccagcg
     5941 ataccatctg cgaggacact gatctcgggc tcaccatcct tgagctaggc tggcaggctc
     6001 attacaccaa tcgccgttac ggctacggcc tgctgccgga tacctttgag gcctacaaga
     6061 agcagcgcga tcgttgggcc tctggcggat ttcagatcgt caaaaagcat tggcgccgtt
     6121 tcctgcctgg cgtgtccgaa ttgaccagcg accagaagcg cgaattcgcg ttcggctggc
     6181 tcaactggct cggcgccgag tcggtcggcg tgctggtagc gatcctcaac ctgatctggg
     6241 tgccggtggt ggcgtttgcc ggcatcgccg tgcccgacaa ggtgctgacg cttccgattc
     6301 tcgcaacttt cgtggtttcg gtcgtgcatt tcgtcgcgct ctatcatcgc cgcgtgccga
     6361 tccccgcatc ccaggccgcc ggtgccatgg tggccgcgat ggcgatgcaa tggaccgtcg
     6421 cgcgtgccgt cgccaacggc gtcgttaagg accacctgac cttcgtgcgc accgccaagg
     6481 gcggcgttgc ccgcaagcgc gtcgtcttcc cggcattcga ggaagcggtt ctgggcggcc
     6541 tgctggcgct tggcgccatc attgtgttcg ccaccaactg ggagcgggta cgcgagatca
     6601 acctgttcgg ctgcattctt gtggtgcaaa gcctcccatt cctggccgct gcagcgctgg
     6661 cggcgtttga gaattcccgt ctcaacgact tcgtgttgtt gcgcagtctt gaagaccggc
     6721 tggcggaagt catctcgcag gtcgtgccgg tacggcgcaa tccgattcgc caagcggccg
     6781 ccgtgcccga aaagcacatg gaagcggcgc agtagcccct accctgccat tgcggtttcg
     6841 accaaacgca cccaataaga tgtgccgtac ggaatcacgt cgtcgttgaa attgtaaccc
     6901 gggtgatgga gcccggcgct gtcgccattg ccgacgaaga tgaaagcacc ggggcgcgct
     6961 tccagcatgt atgagaaatc ctcgccgccc atcaccggcg ccatgtcggt attgacgcga
     7021 tcagtaccga caatgtcact ggcgaccgtc gccgcgaagg cggtctcgcg ttcgtgattg
     7081 gacagcaccg gatagccgcg tcgcagcgtg aaattcgcct tggcgccgta caggcgcgcg
     7141 gcgccgtcga cgatctcggc aatacgtgtg cgcaagcgct cgcgcacctc cggcttgagg
     7201 ctgcgggcgg taccgcgcag tagcgctgtc tgcgggatga cattgtcggc gctgccggcg
     7261 tggaacgtgc aaatcgagac gacggccgcc tcgaccggat cgacattgcg tgacacgatc
     7321 gtctgcagct ggttgaccat ctgggcgccc accaggatgg gatcgatcgc gatgtggggt
     7381 cgcgccgcat ggccgccgac gccctcgatc tcgaccgtga ggttgtcggt tgcagccatg
     7441 atcggcccgc tacggatcga gaactcgccc gtcggtagcc cggggaaatt atgcatgccg
     7501 tagacttcct cgatggcaaa gcgttccatc aggccgtccc ggatcatggc gaggcccccc
     7561 gccccgccct cttcggccgg ctggaagatc accacggccg tgccggcaaa gttgcgggtt
     7621 tcggcgaggt atttcgcagc cccgagcagc atggcggtgt gaccgtcatg accgcaggca
     7681 tgcatcttgc ccggcacagt cgatttgtag gggaaatcgt tcgcctcctg gatcggcaac
     7741 gcatccatgt cggcgcgcag cccgatcacc ttgcgggttc cgcccggccg gtcgccctta
     7801 atgacaccga ccacgccggt gcgcccgatg ccggacacca cttcgtcgca accgaatgcc
     7861 gtaagctgct ccgcaaccgt tccggccgtg cggtgcacgt cataaaggag ttccggatgc
     7921 gcatgaatgt cgcgccgcca agtagtaatc tggccttgga ggtcggctac acgattgacg
     7981 atcggcatca gtgtggctcc ttaccgtcgc ccgctagggc cgcgtccccg actgccgagc
     8041 aaaaccgagc tgcgcggtgt ggtcaaggtg ggacatcgtg ggctctggtg cggccattga
     8101 ttgcacggcg ccgcggcagc cgcgcagtga ggcgtcagag ctgtctcggg aacctcgggt
     8161 gtcgcgccgc gtctttagaa gaggcatcgt tggcagtgct gtcacggcct tcacgactcc
     8221 gcattcaggt taacgaggtc gacgggagcc aggggaatcg ggtgaaggaa ttcacgcggc
     8281 gacgaggctt gcgagatatt cgtcgtccca gcctgcggtt ttgcggcgga ggcggatgga
     8341 atccttgcct ggagccttgc gggtgagatt gtaggcgatg tggcggcagg tcgcgaaatt
     8401 ggctggcgca ttgtcggttc tgacgcggca ttcgtcgtcg cggaaaacca tgtccatgac
     8461 ccaatgcaag gagttctcga tggcccagtg cgcgcggatc atggggccga ccgcattggc
     8521 cagcatgacc agcgaggtga tgtagaagcg cgtctcgtct gtaatcttgc cgttgatttc
     8581 gcgctggctt tcgaccacca caacggcctt caggcccggc cactcgtggc gcgcctgcag
     8641 ccagtcgaca tcgtggatca cggtgtaatt tcgcgtttcg atacgaccgt gatcggcgtc
     8701 gaccgtttgg tgcgtgctga tcgttgtatc cttgtatttc aaggctttct gttcatcgac
     8761 aaagacttcg acatcctcgc gcagggttcc ctgattgccc ttcagggcga gaatgtaatc
     8821 ggcctttttc tcgatgattt tcgcggcgat attgcgttga cagcccatcg catcgatcgt
     8881 caccaccgcg ccctcgatcg acatcatgtc gagcagcgcc gggatggcga cgatctcgtt
     8941 cgacttctca ttcactttca cctggcccag cacgatacgt tgccgcgccg caaaggcgga
     9001 gaccatgtga atcgcctctt tcgagccctt cgtctgatac gagcgccgcg atgtctttcc
     9061 atcgaccgcg atgacctcgg ccggcgtgtt cgtcagcgcc gcgacccagg ccacgaagca
     9121 aagctggaag gcgcgggcgt cgagcgtggc gaagatatcg ccgagatgat catgcgaggg
     9181 cgtgccgttc acatagggcc gaaaccgccg cagaagctcg atcttcctct cgccaaaccg
     9241 agctatgtcg gtgaacgtct ccgcccctgc aaggactgcc agaagaatca agagaaggat
     9301 ttccggcagc ggataatcca ctttgccggc ctgacgatga tccggcaacc cgctgaaata
     9361 gtgaagaaaa ctcgtcgtct ccgcaatctc tgccaatcgt gccccatcgg aaaccatcac
     9421 cgtcctccac ctgcgactca gtggatgaca acagattcag cacttcagcc ttttgtcacg
     9481 aacctcttca cccgattacc ctgggcctcg aacaggcttg gctggagatt ctcggatcga
     9541 tgcgtcattc tctggttgct ccgtttttga ttcggacgcc agaaagccta gaagcgcatc
     9601 gacttcgttg cgtagggagc aaagaacatc caggggaaaa tgcggctcaa cgccaatctc
     9661 gaatcgggac gca
//
LOCUS       DATILV010000322         7332 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2633687, whole genome shotgun sequence.
ACCESSION   DATILV010000322 DATILV010000000
VERSION     DATILV010000322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7332)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7332)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7332
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2633687"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..185)
                     /locus_tag="VLJ17_07305"
     CDS             complement(<1..185)
                     /locus_tag="VLJ17_07305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22821.1"
                     /translation="MNAVVLAISIAYVVMGVLLLCMGLTSRFAWWLKGVVIVVTSAFF
                     IESFFATKGLLGWPGSG"
     gene            complement(240..878)
                     /locus_tag="VLJ17_07310"
     CDS             complement(240..878)
                     /locus_tag="VLJ17_07310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22822.1"
                     /translation="MDNFGNYPDDRPFDPFSVMLFKALQVVAFLFFIALLVMNPEAKQ
                     GKIDTKAEFIITLGWPDSHPDDIDLYVEDPLGNIVWYHEREAGFMVLDRDDRGGLNNS
                     ITVNGRKVMSPIRQETVSIRGIVAGEYTVNVNYYLATTTTPVPVSVKIEKVNPAVEVV
                     FYDTITLDHMTQEETAARFKIAENGNVIDVNHRRKSLIQLTRSVRRSSGGAK"
     gene            complement(862..1638)
                     /locus_tag="VLJ17_07315"
     CDS             complement(862..1638)
                     /locus_tag="VLJ17_07315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018316555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HSV22823.1"
                     /translation="MATRIFNTEFPADHLPLLRWLIFTGVCVFAFVMAWHFGLVWLMI
                     NSDRTYISVVIVVLYVLSSLHCLLRTAAISRELDRAHRVSSLVTKGVPQLKVEGAEVV
                     TPEGTKLPHGEVTAHIRNLILKAGLQGEEHRLDQTLLLRGLADALRGPNQLGSYASDA
                     LMKLGLLGTIIGFIMMLAPIAGLDVADRVSVRTSMGLMSDGMAVAMYTTLTGLIGSIL
                     VQTQYYMLDKATQRLFGLATNLTEVFVVSVLERGQHGQLR"
     gene            1886..2230
                     /locus_tag="VLJ17_07320"
     CDS             1886..2230
                     /locus_tag="VLJ17_07320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018460296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22824.1"
                     /translation="MRKATLSILALIVTVAGAVSAERPTRFWNLTHRTISEFQLAPAG
                     TTNWGENQCKNDKDGTVDFDERLRITGIAPGRYDARLKDVSGRVCFARNIDIKAGDIF
                     SIEERDLADCSR"
     gene            2542..4317
                     /locus_tag="VLJ17_07325"
     CDS             2542..4317
                     /locus_tag="VLJ17_07325"
                     /EC_number="1.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent dehydrogenase, methanol/ethanol
                     family"
                     /protein_id="HSV22825.1"
                     /translation="MTRMSVTGTFIGVLLVGSALTPARAADMTNERALNPQREPQNWI
                     LHHGNYQGHRFSLLKDVNTDTVKNLKPAFAVALSGFQSGGRYAFGNLEATPIVEDGMM
                     YVTDGWGSVYAIDVTAGKKGVIKWKMDPGTDRAWAGDVACCGVNNRGVALWKDKVISI
                     ALDGRMFAINKATGEVVWERKIADPAIGETLTIAPLVIRDLAIVGTAGGEYGIRGFIE
                     ATDLNTGNAAWRTYTIPGTGEPGNETWKDGKDRWKHGGASVWETATYDPESDTFYQGI
                     GNAGPDWDSEYRPGDNKWAASVLAINPSDGKIKWGFQYTPHDPYDYDEISEHPIINAK
                     VNGEDRKLVVHAARNGFFYTLDRINGSFISGKQYVDELNWTPGLDPKTGRPVNYNPNA
                     DVQYYNENSHGTRAKTESARLCPTIAGGKNWEPGAYNPDLGLLFVPSVEGCNKIQTVE
                     QKDMADQGGPIKARERFAGGAPIWPERLYGSLKAIDPTTGETKASTKLTYANYAGALA
                     TAGNLVFLGHMDGTFSAYDAKTLQEVWSFNVGTGINAPPISYAVNGKQYVAVLVGSRQ
                     PTNIIPLSPELKNTSTASMLFVFSL"
     gene            4450..6225
                     /locus_tag="VLJ17_07330"
     CDS             4450..6225
                     /locus_tag="VLJ17_07330"
                     /EC_number="1.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent dehydrogenase, methanol/ethanol
                     family"
                     /protein_id="HSV22826.1"
                     /translation="MNTKCIIGAFAGSLLFTTALIPARAADMTDERALNPQREPQNWI
                     LHHGNYQGHRFSPLKDINTDTIKNLKPAFTVALSGFQSGGRYAFGNLEATPIVEDGVM
                     YVPDGWGSVYAIDLTAGKKGVIKWKMDPGTDRAWAGDVACCGVNNRGVALWKDKVISI
                     ALDGRMFAINKATGEVVWERKIADPAIGETLTIAPLVIRDLAIVGTAGGEFGIRGFIE
                     ATDLNTGKAAWRTYTIPGTGEPGNETWKDGKERWKHGGASVWETATYDPETDTFYQGI
                     GNAGPDWDPEYRPGDNKWAASVLAISPNDGKIKWGYQYTPNDPYDFDEISEHPIINAK
                     VGGEDRKLVVHAARNGFFYTLDRTNGSFIAGKQYVDQLNWTPGLDPKTGKPVNYDPAG
                     GMQIYNENSHGTRAKPNSAKLCPAHFGGKNWEPSAYNPELNLMFIPSIEGCNYIELVE
                     QKDMADQGGPVKPRERFAGGGPKTPDRLYGSLKAVDPVTGEVKARLKLDYPNISGALA
                     TAGNLVFIGHPDGMLTAHDAKTLQEVWSFSTGSGINAPAVSYSVNGKQYIAVLVGSKQ
                     SAFIVQNAPELKNTSTASMLYVFGL"
     gene            6349..>7332
                     /locus_tag="VLJ17_07335"
     CDS             6349..>7332
                     /locus_tag="VLJ17_07335"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HSV22827.1"
                     /translation="MKTKTFAGALVGSLLIVTALTPVGAADMSNDRALNPQREPQNWL
                     LHHGNYQGHRFSLLKEINADTVKNLKPVFTVALSGFQSGGRYAFGNLEATPIVEDGIM
                     YVPDGWGSVYAIDVTAGKKGVIKWKMDPGTDRAWAGDVACCGVNNRGVALWRDKVISI
                     ALDGRMFAINKATGEVVWERKIADPAIGETLTIAPLIIRDLAIVGTAGGEFGIRGFIE
                     GTDLNTGKAAWRTYTIPGAGEPGNETWKDGKDRWKHGGASVWETATYDPETDTFYQGI
                     GNAGPDWDPEYRPGDNKWAASVLAISPNDGKIKWGFQYTPNDPYDFDEISEH"
BASE COUNT         1610 a         2221 c         2176 g         1325 t
ORIGIN      
        1 tggccggagc cgggccagcc caacaggccc ttggttgcaa aaaacgactc gataaagaat
       61 gcggacgtca ccacgatgac cacgcccttg agccaccacg caaatcgcga ggtgaggccc
      121 atgcacaaca aaagcacgcc catgaccacg taggcgatgg atatcgcaag caccacagcg
      181 ttcatcggcg ttacttttct agacctccgc tcgggttttc ggtcacgtca cttgtccagt
      241 catttggcgc cgcccgaaga gcggcggacg ctgcgtgtca gttggatgag ggatttgcgg
      301 cggtgattga catcgataac gttgccgttt tcggcaatct tgaaccgcgc tgcggtttcc
      361 tcctgggtca tatgatccaa cgtgatcgta tcatagaaaa ccacctcgac ggcggggttc
      421 actttctcga tcttgactga taccggcact ggcgtcgtcg tcgtcgccag ataatagttc
      481 acattcacgg tgtactcacc cgctacaatt ccccggatac tgacggtctc ctgtcggatc
      541 gggctcataa ccttgcggcc gttcaccgtg atcgaattgt tgaggccgcc ccggtcatca
      601 cgatcgagca ccatgaatcc cgcttctcgc tcatgatacc aaacgatgtt gccaagcgga
      661 tcctcgacat agaggtcgat atcgtcaggg tgactgtctg gccagcccaa cgtgataatg
      721 aattccgcct tggtgtcgat cttaccttgc ttggcttcag gattcatgac cagcagggcg
      781 ataaagaaca gaaacgccac cacctggagc gccttgaaca gcatgacgct gaaaggatcg
      841 aacggcctat cgtccggata attaccgaag ttgtccatgc tgccctcgct cgaggacgga
      901 caccacaaac acttcggtca gattggtggc gagcccgaac agccgctgag tcgccttgtc
      961 gagcatataa tactgggttt gaaccaagat cgagccgatc agccccgtca aggtcgtata
     1021 catggcaacc gccatgccgt cgctcatcag ccccattgag gtgcgcaccg acacacgatc
     1081 ggctacgtca aggccggcga tcggtgccag catcatgata aatccgatga tcgtgccgag
     1141 cagaccgagc ttcatcaggg cgtcgctcgc gtaggagcca agctggttgg gtccgcgtaa
     1201 ggcgtcggcg agaccgcgca gcagcagtgt ctggtcgagg cggtgctcct cgccttgcaa
     1261 gccggccttg agaatgaggt tacggatgtg cgccgtgacc tcaccgtggg gcaacttggt
     1321 cccctccggg gtcaccactt ctgcaccctc gaccttgagt tgcggcacac ccttggtcac
     1381 cagcgacgat acccgatggg cccggtcgag ttcgcgcgag atcgcagcgg tgcgcaacag
     1441 gcagtgcagc gaactcagga catatagcac gacaatgacg acggaaatgt acgtcctgtc
     1501 actattgatc atcaaccaca ccaggccgaa atgccaagcc ataacgaacg cgaaaacgca
     1561 aacgcccgta aagatgagcc aacgaagcag cggcagatgg tcggcaggga attcggtatt
     1621 aaaaatgcgc gttgccatcc cgaagaactt cttctttgtt ctgtaaccga gcgcctaact
     1681 gcagcgttgg cgcgactaca atgaaattgt taacccggcg atggcggtcg tgtcgatacc
     1741 ttttgttatg ctgcccaggg ctgccgggac tgtcatttat acaaataaac atgggcccgg
     1801 cgacggccac tgtcgcggcc ggctgttgag ggctcttccg ctcgcgagac cttacggcta
     1861 accttgggtg gaccgcggag gaaccatgcg caaggcgacg ctttccattc tggcactcat
     1921 cgtcaccgtc gctggcgcgg tttcggccga gcgcccgacg cgattttgga atctgaccca
     1981 tcgcaccatc tcggaattcc agctcgcccc cgccggcacc accaattggg gcgagaacca
     2041 atgcaagaac gacaaggacg gcacagtgga tttcgacgag cggctgcgca ttaccggcat
     2101 cgcaccgggc cgttatgatg caaggctcaa ggacgtatcc gggcgggtgt gtttcgcgcg
     2161 caatatcgac atcaaggcgg gcgacatctt ttccatagag gagcgtgacc tcgccgattg
     2221 cagtcgttag agcgcgttcc gatgaaattc gccgtgcccg cgcctgccgc cgagaggttg
     2281 ttcgatgtga cgcgtttgcg ttgcattgcc cacggtttgc ccaaccttgt cgtcccactc
     2341 aaaccaaatt gaaccaaaag tggtggtttt gccggcggta aattttcgcg tcccagggac
     2401 gcatcgctga cgtattgacc ccctagcccg tccgggccta ggcttcacca aaagataaaa
     2461 cgcgtggatt tgcacctgca aattcggctt tgcgcacctg caacgtcgaa tttcgtgtgg
     2521 gcccagaggg aggatgctga catgacccgc atgtctgtta ccggcacttt tattggtgtg
     2581 ctgcttgtgg ggagcgcgct cacgccggcg cgcgccgccg acatgaccaa tgagcgcgcg
     2641 ctcaatccgc agcgcgagcc gcagaactgg atacttcacc acggcaacta tcagggccat
     2701 cgcttctcgc tgctcaagga cgtcaatacc gatacggtca agaacctgaa gccggcattc
     2761 gccgtggcgt tgagcggttt ccagagcggc ggacgctatg ctttcggcaa tttggaagcg
     2821 acgccgattg tcgaggacgg catgatgtat gtaacggatg gctggggctc ggtctacgcc
     2881 atcgacgtca ccgcgggcaa gaagggcgtc atcaaatgga agatggaccc gggcaccgat
     2941 cgtgcctggg ccggcgacgt ggcctgctgc ggcgtcaaca atcgaggcgt tgcgctatgg
     3001 aaggacaaag taatctccat cgcgctcgac gggcgaatgt ttgcgatcaa caaggcgacc
     3061 ggcgaagtgg tctgggagcg caaaatcgcc gatccggcga tcggcgagac gctgacaatt
     3121 gcaccgcttg tgattcgtga cttggcgatc gtcggtacgg ccggcggcga gtacggcatt
     3181 cgcggcttca tcgaggcgac cgatcttaac accggcaacg cggcttggcg tacctacacg
     3241 atcccaggga caggcgaacc cggcaacgag acctggaagg acggtaagga ccgctggaag
     3301 catggcggcg cctcggtgtg ggagaccgcc acctacgatc cggaatccga caccttctac
     3361 caggggatcg gcaatgccgg gcccgactgg gattcagaat atcggccggg cgacaacaag
     3421 tgggcagcga gcgtcctcgc catcaatcca agcgatggca agatcaagtg gggcttccag
     3481 tatacgcccc acgatcccta cgactatgac gagatttccg aacacccgat catcaacgcc
     3541 aaggtaaacg gagaggatcg caagctcgtc gtccacgccg ctcgcaacgg cttcttctat
     3601 acgcttgatc gcatcaacgg ctcgttcata tcaggcaaac agtatgtcga cgagttgaac
     3661 tggacgccgg gtctcgaccc caagaccggt cggccggtca actacaatcc caatgccgat
     3721 gttcagtatt acaacgagaa cagtcatggc acccgtgcca agacggagag tgcaaggctg
     3781 tgccccacga ttgccggcgg caagaactgg gaacccggcg cctacaaccc ggacctcggc
     3841 ctgctcttcg tcccctcggt cgagggatgc aataagatcc agactgtcga gcagaaagac
     3901 atggcggacc agggcggccc aatcaaagcg cgcgagcgct tcgccggagg ggcccccatc
     3961 tggccggagc gcttgtatgg cagcctcaag gcgatcgacc cgaccacggg cgagaccaaa
     4021 gcctccacga agctcactta tgcgaactac gcgggtgcgc tcgcaaccgc cggcaacctg
     4081 gtgttccttg gccatatgga cggtaccttc tcggcctatg atgccaagac gctccaggag
     4141 gtctggagct tcaacgtcgg cacgggcatt aatgcgccac cgatcagcta cgcggtcaac
     4201 ggcaagcaat acgtcgcggt gctggtcgga tcacggcagc caaccaacat cattccgcta
     4261 tcgccggagc tcaagaacac atcgacggcc tcgatgttgt tcgtcttcag cctgtagccc
     4321 cgcatctgcc ggcgcaatcc aaagaggttg cgccggcgca acgtgttgac gctccgggtg
     4381 gggcgaaagc ttacagtcaa gaaaaatccg gtatttgcgg cgccggatca aatgcaacgg
     4441 gagaaagcca tgaataccaa atgcataatc ggcgcttttg ccgggtccct gctcttcacg
     4501 accgcgctga tccccgcacg cgcggccgac atgaccgatg agcgcgcgct caatccgcaa
     4561 cgcgagccgc agaactggat ccttcatcac ggcaactatc agggccatcg cttctcgccg
     4621 ctcaaagaca tcaacaccga tacgatcaag aacctgaagc cggcattcac cgtagcgctg
     4681 agcggtttcc agagcggcgg acgctatgct ttcggcaacc tggaagcgac cccgatcgtc
     4741 gaggacggcg tgatgtatgt gccggacggc tggggctcgg tctatgcgat cgatctcacc
     4801 gccggtaaga agggtgtcat caagtggaag atggaccccg gcaccgatcg cgcctgggcc
     4861 ggcgacgtgg cctgctgcgg cgtcaacaat cgcggcgttg cgctatggaa ggacaaagta
     4921 atctccatcg cgctcgacgg gcgaatgttt gcgatcaata aggcgaccgg cgaagtggtc
     4981 tgggagcgca aaatcgcgga tcccgccatc ggcgagacgc tgaccatagc gccgctcgtc
     5041 atccgcgatc tcgccatcgt cggcaccgcc ggcggcgaat tcggcatccg cggcttcatc
     5101 gaggcgaccg atctcaacac cggcaaggcg gcctggcgca cctacaccat cccggggaca
     5161 ggcgaacccg gcaacgagac ctggaaggac ggcaaggagc gctggaagca tggcggcgcc
     5221 tcggtgtggg agacagcgac ctacgatccg gaaaccgata cgttctacca agggatcggc
     5281 aatgccggcc ccgactggga ccccgaatac cggccgggcg acaacaagtg ggccgcaagc
     5341 gtgctcgcca tcagcccaaa cgacggcaag atcaagtggg gctatcaata caccccgaac
     5401 gatccctatg atttcgatga aatctccgag cacccgatca tcaacgccaa ggttggcggc
     5461 gaggaccgta agcttgtcgt ccacgcggct cgcaacggct tcttctatac gctcgaccgc
     5521 accaacggct cgttcatcgc gggcaaacag tatgtcgacc agttaaactg gacgcccggc
     5581 ctcgatccca aaaccggcaa gccggtcaac tacgatcccg ccggtggcat gcagatttac
     5641 aacgagaaca gtcacggcac acgcgccaaa ccgaatagcg ccaaactctg ccccgcgcat
     5701 ttcggcggca agaactggga gccgtcggcc tacaatccgg aactgaacct catgttcatt
     5761 ccctcgatcg aaggctgcaa ctacatcgag ttggtcgagc agaaggacat ggcggaccag
     5821 ggcggcccgg tgaagccacg cgagcgtttc gccggaggcg gtcccaaaac acccgaccgg
     5881 ctctatggca gcctcaaggc ggtcgatcct gtgaccggcg aagtcaaggc caggctgaag
     5941 ctcgactatc cgaatatcag cggggcgctg gcgaccgccg gcaatctggt gttcatcggc
     6001 catccggacg gcatgctgac ggcgcatgac gccaagacgc tgcaggaagt ctggagcttc
     6061 agcaccggat ccgggatcaa cgcgccggcg gtgagctatt cggtcaacgg caagcaatac
     6121 atcgctgtgc tcgtgggctc aaagcagtcc gcgttcattg tgcagaatgc gcctgagctg
     6181 aagaacacgt cgaccgcctc gatgctgtac gtgtttggcc tctgagcatg caatgagcgc
     6241 cggcgcgtcg tcgtggtcgc tccggcgttg cgattgggaa acgcgcataa tccagacggg
     6301 gtggacgccg ggtgccggcg tctgtgccac aaaagagggt gagttgacat gaagactaag
     6361 actttcgccg gagcactggt tggctctttg ctgatagtaa ccgcgctcac gcccgtcggc
     6421 gccgccgaca tgtccaatga tcgcgccctc aacccgcagc gcgagccgca gaactggctg
     6481 ctccatcacg gcaattatca ggggcaccgc ttttcgcttc tcaaggagat caacgccgac
     6541 accgtcaaga acctaaagcc ggtgttcacg gtggcgctca gcggctttca gagcggtggg
     6601 cgctatgctt tcggcaatct ggaagcgacc ccgatcgtcg aggacggcat catgtatgtg
     6661 ccggatggct ggggctcggt ttacgcgatc gacgtgacgg ccgggaaaaa gggtgtcatc
     6721 aagtggaaga tggacccggg caccgaccgc gcctgggccg gagacgtcgc ctgctgtggc
     6781 gtcaacaatc gaggcgtcgc gctgtggagg gacaaggtga tctcgatcgc gctcgacggg
     6841 cgcatgttcg cgatcaacaa ggcgaccggc gaagtcgtat gggaacgcaa aatcgcggat
     6901 cctgccattg gcgaaacgct caccatcgcg cccttgatca ttcgcgacct cgccattgtg
     6961 ggcaccgccg gcggcgagtt cggcattcgt ggcttcatcg aagggacgga cctcaacacc
     7021 ggcaaggcgg catggcgtac ctacaccatt ccgggtgccg gcgagcctgg caacgaaacc
     7081 tggaaggacg gcaaggaccg ctggaagcat ggcggcgcct cggtgtggga aactgccact
     7141 tacgatccgg aaaccgacac cttctatcaa ggcatcggca atgccggacc ggattgggat
     7201 ccggaatatc gtcccggcga taataaatgg gccgcgagtg tgctcgccat cagcccgaac
     7261 gacggcaaga tcaagtgggg cttccagtat acgccaaacg atccctacga tttcgacgaa
     7321 atctccgagc ac
//
LOCUS       DATILV010000323         2042 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3397603, whole genome shotgun sequence.
ACCESSION   DATILV010000323 DATILV010000000
VERSION     DATILV010000323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2042
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3397603"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(272..1690)
                     /locus_tag="VLJ17_07340"
     CDS             complement(272..1690)
                     /locus_tag="VLJ17_07340"
                     /inference="COORDINATES: protein motif:HMM:NF033593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISNCY family transposase"
                     /protein_id="HSV22828.1"
                     /translation="MSRAANLQLSFADWELLRQGVVLEPSLAAIADFLDEHEEMIEAI
                     RGDLRCGLKRPDAGRKGLTAQQVLRSLILMRVKNWDYRELRERIADGLTLRRFTDFNA
                     QPVPKHDAFQRAFTRLAPQTLKLVNELLVQAAVAMGLEDGSKLRVDTTVVATDIHHPT
                     DNTLLWDVVRVVTRLLGRLADIIERPIKGFRNRTRAARRRMLAIQRMTTTQRQTQQRG
                     KYRELIGIAEEVVERARRGLRHTRKVRAKDVPSQLALEELRRQIEHYCGLGERVIDQA
                     RRRVLQGEQVPNAEKIYSIFEPHTDLIMRGKVRTPVEFGHKVFLAESAQGLITQYEVL
                     NGNPSDENHVEPSLSRHEATFGSAPRLYGSDRGFFSEKNLAACERRGVAVVCIPQRGG
                     KKTAEREAHEKSREFKKGQRFRAGIEGRISVLFRGRGMKRCLAEGRERFELLVGAAVF
                     VNNLLIIASLLKRRSSDQRQAA"
BASE COUNT          389 a          643 c          577 g          433 t
ORIGIN      
        1 aaaactcgaa aaatgccgga tatgcccggc tatcttggga tttgcgacag aaactagtct
       61 agtctagttt ctgtcgcaaa accctatttt gctgcacagg accgcgcctt tccaggggaa
      121 acggggcggg tttaggctga cgatggttgc tggataccgt tgcgggccgc caaatttcat
      181 cgcccttgcg aattagtaat cgtgatagcg gattagtaat cgtgaggacg tgatggtgcc
      241 gcgccccgct tatttacgtt caaatgcgcg ttcaggcggc ttgtcgctgg tccgacgatc
      301 gtctcttcag caaggacgca attatcagca aattgttgac aaatacggcg gcgccgacca
      361 atagctcgaa gcgctcccgg ccttcggcga ggcagcgctt cattccgcgg ccgcgaaaca
      421 agactgatat gcgaccctcg atgccggcgc ggaagcgctg gcctttcttg aactcccggc
      481 tcttctcgtg ggcctcgcgc tcagccgttt tcttgccgcc gcgctgtgga atgcatacca
      541 ccgcgacgcc gcggcgctca cacgccgcca ggttcttctc gctgaaaaat ccacgatccg
      601 aaccgtacag tcgaggagcg ctgccgaaag ttgcttcatg gcggctcagc gagggctcga
      661 catggttctc atccgaagga ttcccattga gcacttcata ttgggtgatc agaccctgcg
      721 cgctttcggc gaggaagact ttgtgaccga attcgactgg tgttcgcacc ttgccgcgca
      781 tgatcaaatc ggtatgcggc tcgaagatcg aatagatctt ctcggcattg ggaacctgct
      841 ctccctggag cacgcggcga cgggcttgat cgatcacgcg ttctccgaga ccacagtagt
      901 gctcgatctg acgccgcagc tcctcgagtg ccagctgcga aggcacgtcc ttggcgcgga
      961 ctttgcgagt gtgccgcagc ccccttcggg cccgctccac gacctcctcg gcaatgccga
     1021 tgagctcacg atatttgccg cgctgctgcg tctgtcgttg cgtcgtcgtc atccgctgga
     1081 tggccagcat ccgccgccgc gccgcgcgcg tgcgattgcg aaaacccttg attggccgct
     1141 cgattatgtc ggcgagccga ccgagcagcc gggtcacaac ccgcaccaca tcccacagca
     1201 atgtgttgtc ggtcggatgg tgaatgtcgg tcgcaaccac cgtcgtatcg acgcgcagct
     1261 tgctgccgtc ttccagcccc atggcaacgg ccgcctgcac caagagttcg ttgaccagtt
     1321 tcagcgtctg cggcgcgagc cgggtgaacg cccgctggaa ggcatcgtgc ttgggcaccg
     1381 gctgggcgtt aaaatccgtg aaccgccgca gcgtcagtcc gtcggcaatc cgttcgcgta
     1441 gctcgcgata gtcccaattc ttcacgcgca tcagaatgag cgagcgcaac acctgttgcg
     1501 cggtcagtcc cttgcgaccg gcatcgggcc tcttgaggcc gcaccgcaga tcgccgcgaa
     1561 tcgcctcgat catctcttca tgctcatcga ggaaatcggc gatcgccgcc agcgatggtt
     1621 ccagaactac tccttgccgc aacaactccc agtcggcgaa gctcaactgc agattggcgg
     1681 ctctcgacat ggctcaatcc gtcgattgtt gcgccgtctg ccgctcgcgc ttcaaagcct
     1741 tcacatatcg cgctgcggcc tcatacaaca gttcttgaag agcgcgcccg ttgtccaaac
     1801 agcgctgaac ttccggtacc agttcttctg gaatgtaaac cgaaaaccgg cgtcccttgc
     1861 gacgaccgta caacacgtaa ctcaggtgtt gttcaccgga tcggcaggcc tggcaattct
     1921 cacgtatgca ggggctgcga cgcaggctca gcgagcccag aacggccggc catctgccgg
     1981 ccgatcgatc cgctaaccag cgcgtgacat ccgcaggtga ttcgttcttg tgcattagaa
     2041 tg
//
LOCUS       DATILV010000324         1993 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4930832, whole genome shotgun sequence.
ACCESSION   DATILV010000324 DATILV010000000
VERSION     DATILV010000324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1993)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1993)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1993
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4930832"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            144..1409
                     /locus_tag="VLJ17_07345"
     CDS             144..1409
                     /locus_tag="VLJ17_07345"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HSV22829.1"
                     /translation="MTAAMNEDPGAHGLTASAEATDFPSTLLRLPSDLQSIFEQSYPR
                     FSDAEYERRHGGIARAMEAAGADHALIVTVQNVGNATRWMTGWPGTAEALLLFRPGEK
                     MVMFVEYYNHLPQARLIARNTDVRWGEEKGITKIIQELTRRGASRVGVIGPLSGPRWK
                     ALEADFQLVSLDADYVELRLVKSDEEIAWLRVGAALSDAGMAALVGGTRPGMTEHELG
                     SMIERAFIGHGGTNVIHFIGSTPMAAPDVYVPPQFTSRRKIEAGDFVFCELSAAWWDY
                     SGQVIRGFSVEADPTPLYRDLHATAVAAFQSITKAIRPGVLPQHLIDASGIIEENGFT
                     TYDDLVHGFGGGYLPPIIGSKSRPAGQMPTFPVQENMCLVVQPNVITCDFKAGVQFGE
                     LIRVTSSGVESLHRTPQAMFRSGQVICTF"
     gene            1681..>1993
                     /locus_tag="VLJ17_07350"
     CDS             1681..>1993
                     /locus_tag="VLJ17_07350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018264686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22830.1"
                     /translation="MIKSRVITFVLTICACILTTSAYADCRDLPQWSSLKGALAAAVS
                     ADVTGFRLNMWASIVDRDGTVCAVAFNGNSYRDQWLGSRVISAQKANTANDFSLGQSS
                     GR"
BASE COUNT          416 a          590 c          580 g          407 t
ORIGIN      
        1 agaagagggc ggccccggct tacgctggcg gtcaattcag gctacgcttg cgacgtgcga
       61 cttgcaattc ggccaaataa gatcgaccga agggacttta tgaatttccg cgcattcgaa
      121 acgacgtgcc gggagcccgc accgtgacag ccgcgatgaa tgaagatccg ggcgcgcatg
      181 gcctgaccgc aagtgccgag gcaaccgatt ttccgtcgac cttgctcagg ctcccatccg
      241 acctgcaatc gatcttcgag cagagttatc cgcgcttctc cgacgccgaa tacgagcgtc
      301 gccatggcgg catcgcacgc gccatggagg cggcgggagc cgaccatgca ctcatcgtta
      361 cggttcaaaa cgtcggcaat gcgacacgct ggatgacggg ctggcccggg accgcggaag
      421 ccctgttgct gttcaggccc ggcgagaaga tggtgatgtt cgttgagtac tacaatcatt
      481 tgccgcaggc gcgcctcatc gcccgcaata ccgacgtgcg gtggggtgag gagaaaggca
      541 tcaccaaaat catccaggaa ctcacccggc gcggcgcctc gcgtgtcggg gtgatcgggc
      601 cgctcagcgg tccgcgatgg aaggcgctgg aggcggactt ccaactcgtc agcctcgacg
      661 ccgactacgt cgagctgcga ctcgtcaagt ccgacgagga aatcgcgtgg ctacgcgtcg
      721 gggcagcgtt gagcgatgcc ggaatggcgg cattggtcgg cggcacgcgg cccggcatga
      781 ccgagcacga actcggcagc atgatcgagc gcgctttcat tggccatggt ggcaccaacg
      841 tcatccattt catcggctcg acccctatgg cggcaccgga cgtctatgta ccgccgcagt
      901 tcacctcgcg gcgcaagatc gaggcgggtg acttcgtatt ctgcgagctg tcggccgcct
      961 ggtgggacta ttccggccag gtgatacgcg gcttttcggt cgaggccgac ccgaccccgc
     1021 tctatcgcga cctccacgcc accgcggtgg ccgccttcca atccatcact aaggccatcc
     1081 gaccgggtgt gctaccgcaa caccttatcg acgcttcggg gattatcgag gagaacggct
     1141 tcaccactta cgatgatctc gtgcatggct ttggcggcgg ctatttgccg ccgatcatcg
     1201 gctccaaaag tcgtccggcc ggacagatgc ccacgttccc ggtgcaggag aacatgtgcc
     1261 tggtggtgca gcccaatgtt atcacctgcg acttcaaggc gggtgtccag ttcggtgagc
     1321 ttatccgggt caccagctcg ggggtcgagt cgctgcatcg cacgccccag gccatgttcc
     1381 gatccgggca ggtgatttgc acgttctagc gctgaccaag caaccacagt tttgttggtg
     1441 cgcctgatca ttttgaatac cgatagaccc gctcgcaaca aatcttctga aaccgccctc
     1501 ttcaaattta cgaaaactac cataatactg cttcgttacg ccacggcggt acaatacggt
     1561 gggttacgcc ggtttcacct acagtaattc cccatttatc cacatggctt tctaacgatc
     1621 aaaaaaatcg atatcagggc ttcgcgaaac tgggaaaatc tatcctaaag ggatcaaagc
     1681 atgataaaat cacgtgtaat caccttcgta ttgactatct gcgcctgcat tttaacaaca
     1741 tcggcctatg ccgattgccg ggatttaccg caatggagca gtttgaaagg cgcgctggca
     1801 gcagcagttt ccgcggatgt cactggcttc aggctcaata tgtgggcaag catcgttgat
     1861 cgtgacggca cggtatgtgc ggttgccttc aacggtaata gttaccgcga ccaatggctg
     1921 ggaagtcgcg tcatctcagc acagaaggcg aatacggcga atgacttcag tcttgggcaa
     1981 tcgtcgggac gcg
//
LOCUS       DATILV010000325        13046 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_846487, whole genome shotgun sequence.
ACCESSION   DATILV010000325 DATILV010000000
VERSION     DATILV010000325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 13046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13046
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_846487"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..374)
                     /locus_tag="VLJ17_07355"
     CDS             complement(<1..374)
                     /locus_tag="VLJ17_07355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSV22831.1"
                     /translation="MAISSGDSLEKLEDMIVRAAETAAGQVRAAKDAIGTVIFGQDKV
                     VEQALITVLSGGHALLVGVPGLAKTKLVDTMGTVLGLDARRIQFTPDLMPSDILGTEV
                     LEEVPGGKRNFRFIPGPVFAQLL"
     gene            606..1208
                     /locus_tag="VLJ17_07360"
     CDS             606..1208
                     /locus_tag="VLJ17_07360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1285 domain-containing protein"
                     /protein_id="HSV22832.1"
                     /translation="MQKTRQSGKNDLEDIVGVVKSASHKGPPPVHLWNPAYCGEIDMR
                     IGVDGTWFYQGTPIGRPAMVKLFASILKREGEKYFLVTPVEKCGIAVDDAPFTAVELR
                     IQNGGAGQQLCFRTNVDEWVACGPDHPLRFESEVATGGLKPYVHVRRDLWAKVTRALF
                     YDLVDLGEAREVAGIPIFGVSSAGQFYAMAPVDSLEDITR"
     gene            1205..1882
                     /locus_tag="VLJ17_07365"
     CDS             1205..1882
                     /locus_tag="VLJ17_07365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0010945 - coenzyme A diphosphatase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HSV22833.1"
                     /translation="MTDAAPVRTDDAHGSEFFDRVRQRLSLNVPAALRDFTAPAVRGD
                     LDLDPESWKKAGVTAEKLAAVLIPVVDRSTPTVILTQRTADLPSHAGQIAFPGGKIDA
                     GDETPVAAALREAEEEIGLEPALVEPLGYLDLYLTFSGFRILPTVARIAPHFALALNR
                     SEVAEVFEVPLEFLMTPANYRRRSRDWKGIIRHYYEISYRNRYIWGVTAGILRNLYER
                     TYREQEP"
     gene            1926..2189
                     /locus_tag="VLJ17_07370"
     CDS             1926..2189
                     /locus_tag="VLJ17_07370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6111 family protein"
                     /protein_id="HSV22834.1"
                     /translation="MIRNIVTELALFLTPFVAYALFLWATRAGVLDVSAWSLPRLMWL
                     ASAALVLMIASFVVLAQFSGVPPGLTYIPAHLENGRLVPGTER"
     gene            2186..3436
                     /locus_tag="VLJ17_07375"
     CDS             2186..3436
                     /locus_tag="VLJ17_07375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009025728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HSV22835.1"
                     /translation="MTASLRLPDAGWLGAPALARVLSILNGDGEEARVVGGAARNALM
                     GLPLSDIDIATTAQPDEVVRRATADGLKTVPTGIDHGTVTLVVGGMPFEVTTLRRDVE
                     TFGRKAKVAFGRDWKVDAERRDFTMNALSISLDGTVHDYVDGLADLRAHRVRFIGEPA
                     RRIAEDYLRILRFFRFHASYAHGPPDPAGLHACIAARDGLRTLSRERVRAELMKLLLA
                     PFAVPTLAVMVEAGFAAPLLGGVALLASFANMIKVEEAAAVAPDAVRRLGALGVFIAE
                     DVERLRERLRLFNAEYERLAAMADRWWRVSPALGEAGARALLYRLGPVAYVDRALIAW
                     TRAPQGAADPAWHDLATLPMRWTAPRFPLKSAHLLARGVAKGPALGAAMRAAEDSWIA
                     AEFPLDQITLDRIADAAAQSATVV"
     gene            3547..4254
                     /locus_tag="VLJ17_07380"
     CDS             3547..4254
                     /locus_tag="VLJ17_07380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HSV22836.1"
                     /translation="MAVFTSLLGGVAGYGTGALMPLVLVPIVGPEPVVPIIAISAVLT
                     NLSRALAFRGAIDWRRAKLVVFAAIPTCILGAWGYTLLSGPGAMLLIGAMLVVAVLLR
                     RIVGRYGFTVQDRGLVVGACGWGLVVGGTNGAGVIIISLLMAAGLTGAAVIATDAALS
                     VVVGLVRLTVFGIAGVATAKVMAVALLIGAVTLPGAFLARLIVERLPIHVHAAMLDVV
                     VVLGGAVMIAGAVGKMG"
     gene            4524..5501
                     /locus_tag="VLJ17_07385"
     CDS             4524..5501
                     /locus_tag="VLJ17_07385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV22837.1"
                     /translation="MKFTRRRLLQFTGAGAAAPIFAKRTSALDYPTRPVHVIVGFAPG
                     GAPDIVARLLGPSLTERLGQSIIVENRTGAGSNIATEAVVNAPPDGYTLLLVSPPNFV
                     NATLYDKLNFNFIRDIAPVAGLIRVPNVMEVTPSLPVKTVPEFIAYAKANPNKLNMSS
                     GGNGTSVHVAGELFKMMTGVKMLHVPYRGVGASYPDLLAGQVQVMFDSMPGSIEFIRS
                     GRLRALAVASATRSPALPDVPTVGEFVPGYEASAVHGVGTPRNTPAEIVDKLNKAIND
                     ALAEPAIKARLADMGATLLVGSPADFGKVIVDETEKWAKVVKFSGARPD"
     gene            complement(5563..5859)
                     /locus_tag="VLJ17_07390"
     CDS             complement(5563..5859)
                     /locus_tag="VLJ17_07390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MliC family protein"
                     /protein_id="HSV22838.1"
                     /translation="MRRHFIRWLGAVGLVIGPSPVLAQSFLTYHCGDGVEFVVAFVEG
                     DRSAHVQLDGKAMSLPRRFSPSGSRYTKGDVTLRITKTITTLRRGKRLSECTAT"
     gene            6109..7179
                     /locus_tag="VLJ17_07395"
     CDS             6109..7179
                     /locus_tag="VLJ17_07395"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HSV22839.1"
                     /translation="MGLYSATPNRVVSIQYLRALAAILVAVQHANSGPIHLDIVRPDL
                     GAFGVDLFFVISGYVMWATTAVTPRTPGQFWGARIIRIVPLYWAFTSLYLAITLLHPA
                     ALQHPSTDLTHIVKSYAFVPAVHPALGGILPVYTLGWTLNYEMFFYLVFGIALLVQSR
                     AARLAVVALALGGLVSAGFAWRPTDPILQTYTSELLLEFLCGTLIAAATERLMSWGAR
                     AAGPMLGVAAIWLGAAYSGQIGGGRFVMFGLPAALTVVALLALERSLRTRPLKLGLLI
                     GDASYSLYLCHPFAQRAIYLVLPTAAAAANPVIGLFFIAVASLAAILCAIAVYRVIEQ
                     PTMAVLRGARRFPLSETYAKLS"
     gene            complement(7610..9172)
                     /locus_tag="VLJ17_07400"
     CDS             complement(7610..9172)
                     /locus_tag="VLJ17_07400"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSV22840.1"
                     /translation="MRYKLAMLLAGSALMAGPAAAQNAASLLQAADKAMGASAVNSVV
                     YSGTGWMGAVGQSFATEGTDSDWPRTDFKSYVATIDYAGKSLKEDHVRVQGNNAPRGG
                     GFVPLQGEVHTTNFVSGNYAWNLNPQGQPNPQPAAVEYRQLLISLSPHGFIKAAQQAG
                     NATVEDRYYVRQNRTLKVVGFTTMGKYRVTGEFNNDNLLERVITWVPDPVLGDMMVEI
                     RYSDYRDVGGGAKFPFRTHAHQGDNALVPGGHNWMEVRVTDAKVNVPDAAVPVPDSVR
                     NAPAPQVRVTAQKLGDGVWLMGGSNANSVAVEFKDFIAVIESPGNETRSNAVIAEIKK
                     TIPNKPIRYLVVTHHHFDHLGGVRTYAAEGATVIAEEHNKDYFQKVVLGPQSRTLEPD
                     RLSQFPFAPTGPGPLMLQTFSDEYSISDGQRSILLYHVDNLNHANDMLIAYLPQEKIV
                     INADLYGPPPPGATPANVNLNAVALFRNLKRLKLDVAQHVPIHGNPGSHADFERIVGP
                     VAARTPAAGGGG"
     gene            complement(9379..10263)
                     /gene="hemF"
                     /locus_tag="VLJ17_07405"
     CDS             complement(9379..10263)
                     /gene="hemF"
                     /locus_tag="VLJ17_07405"
                     /EC_number="1.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012042500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004109 - coproporphyrinogen oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-dependent coproporphyrinogen oxidase"
                     /protein_id="HSV22841.1"
                     /translation="MDDSQLEERKACAKTWFEALRDDICAAFERLEAAAPPSLYGGAA
                     GRFERAPWSRNDHTGAPGGGGVMSMMKGRLFEKVGVHVSTVFGEFAPEFRNQIPGADT
                     DPRFWASGISLIAHLWNPHVPAVHMNTRFVVTTKAWFGGGADLTPVLDKRRTQDDADT
                     VAFHAAMKVACDAHAAVAPYDKYKKWCDEYFFLKHRNEMRGIGGIFYDYLETDWEAAF
                     AFTQDVGRAFVNIYPELVRRNFATPWNEAQREEQLVRRGRYVEFNLLYDRGTVFGLKT
                     GGNVDSILSSMPPVVKWP"
     gene            10416..12047
                     /locus_tag="VLJ17_07410"
     CDS             10416..12047
                     /locus_tag="VLJ17_07410"
                     /inference="COORDINATES: protein motif:HMM:NF020976.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase D family protein"
                     /protein_id="HSV22842.1"
                     /translation="MSCLLPSRLASKPNDFSVNRRRLIGGLAAGCFGLMAGPVVIGGA
                     IAQARRWPADPFSLGIASGAPRPDGFVLWTRLAPDPLSINPATPGGMTGGDVPVAYEI
                     AGDEAMHDIVRRGVADAEAAYGWSVHVDVSGLQPGRPYWYRFRSGDAVSQTGRAMTSI
                     AAGTPVERMRFGFVSCSHYELGYFSAYRHLADENPDMVLFLGDYIYEGAQQGRVRTHS
                     DGIEAATLPTYRNRYAQYRLDADLQRIHAQAPSLVTWDDHEVSNDYADKWSQYYDDPE
                     LFLRRRAAAYQAFYEHMPVRPILSRPEGPVMRIYDRFTFGDLLEISMIDGRQYRSRAA
                     CYEPPNRLRGHFETDAACPERRAEGRTMLGYAQENWLGLGLAQSKAKWNVIAQDVLMA
                     QLRRKVTDGNFGFWTDDWDGFPASRRRLLQSIVQARTSNPVVIGGDIHAFFANDLRVD
                     FDDPNSPVVATELVGTSISSQGPPYQAIADVLPDNPHVRFFESRKRGYVSVQVDAKQM
                     TAQLRAISDVTDPKASVSTLKTFAVESGKPGVVGA"
     gene            complement(12140..12592)
                     /locus_tag="VLJ17_07415"
     CDS             complement(12140..12592)
                     /locus_tag="VLJ17_07415"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012042503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008175 - tRNA methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (cytidine(34)-2'-O)-methyltransferase"
                     /protein_id="HSV22843.1"
                     /translation="MRFALFEPDIPQNTGTMLRLAACLALEAHLIEPAGFPVSDRAFR
                     RAGMDYLDQVVLIRHPSWSDFECWRAAQGLRLVLFTTKATASYLDHRYETRDILLFGR
                     ESAGVPDHVHEAADVRLRIPMRAGMRSINVAIVCAMAVGEALRQVGSF"
     gene            12880..>13046
                     /locus_tag="VLJ17_07420"
     CDS             12880..>13046
                     /locus_tag="VLJ17_07420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016839713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008121 - ubiquinol-cytochrome-c reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit N-terminal domain-containing protein"
                     /protein_id="HSV22844.1"
                     /translation="MTTMSAAEPTRRDFLFVATGAVGAIGAAATLVPLIAQMNPDAST
                     IAAGAPIEVDLA"
BASE COUNT         2264 a         4052 c         4070 g         2660 t
ORIGIN      
        1 aggagctggg cgaatacggg tcctgggatg aaccggaagt tgcgctttcc gccaggcacc
       61 tcttccaaca cttcggtgcc gagaatgtcg gagggcatca aatccggggt gaactggatg
      121 cggcgtgcat caaggcccag caccgtgccc atggtgtcca caagcttggt cttggcaaga
      181 cccggcacgc ccaccagcag ggcatgacct ccggaaagta ccgtgatcag cgcttgttcg
      241 acgactttgt cctgaccgaa aatgacggtg ccgatcgcgt ctttggcggc gcgcacctgg
      301 ccggcggcgg tctcggccgc ccgcacaatc atgtcttcca atttctccag gctgtcgccc
      361 gacgatatcg ccataaggct cgctcctcga tctttcccca caccatattc taggatgtgg
      421 cagtgcaaaa aataggccgc aacccaacgc gaccgggctc atatacccgg ccgccgactg
      481 tttccgaacc taattgtacg ctattttgcc gcaatggcga ttgttttggc gcaataatcg
      541 ttcccggccc gaacatcata ttttcgcgag cggccggcgg gcatcccgct atagtagagc
      601 caactatgca gaagacaagg caaagtggca agaatgatct cgaagacatt gtgggcgtgg
      661 tgaaatccgc gtcccacaaa gggccgcctc cggtccacct gtggaatccg gcctattgcg
      721 gggaaatcga catgcggatt ggagtcgacg gtacctggtt ctaccaagga actccgatcg
      781 gccggcccgc catggtcaaa ttgtttgctt caattcttaa acgagaggga gagaaatact
      841 tccttgtcac cccggtcgaa aagtgcggca ttgcggtcga tgatgcgccg ttcacggccg
      901 tcgagctgcg gatccagaat ggcggagcgg gccagcagct ttgcttccgc accaatgtgg
      961 atgagtgggt cgcgtgcggg cccgaccacc cactgcggtt cgagtccgag gttgcgacgg
     1021 gtggcctcaa gccctatgtc cacgtgcgcc gcgacttgtg ggctaaggtg acgcgtgcgt
     1081 tgttctatga cctcgtcgat cttggcgagg cgcgcgaggt tgccggcatc ccgatcttcg
     1141 gtgtttcctc cgccggccaa ttttatgcta tggccccggt cgatagcctt gaggatatca
     1201 ctcgatgacg gacgctgcgc cggttcgcac cgacgatgct cacggatcgg aattcttcga
     1261 ccgtgtgcgc cagcggcttt ccctcaatgt gccggctgcg ctgcgcgact ttacggcacc
     1321 ggccgtgcgg ggcgatctcg atctcgatcc ggagtcttgg aagaaggcgg gcgtgaccgc
     1381 cgagaagctg gcagcggtgc tcatcccggt ggtcgatcgg tcgaccccaa ccgttattct
     1441 aacgcagcga accgccgatc taccgagcca tgccggccag attgcctttc cgggcggcaa
     1501 gatcgacgcc ggcgacgaaa cgccggtcgc ggcagcattg cgggaggccg aagaggaaat
     1561 cggcttggag ccggcgctcg tggagccgct tgggtacctc gacctctatc tgaccttcag
     1621 cggcttccga atcctgccca cggttgcgcg gatcgcgcct cattttgcgc tggcgctgaa
     1681 ccggtctgaa gtcgcggagg ttttcgaggt accgctagaa tttctgatga cgccggcaaa
     1741 ttaccgacgc aggagtcgcg actggaaggg catcatccgc cactattatg aaatttccta
     1801 ccggaaccgc tacatctggg gtgtcacggc gggtatcctg cgcaaccttt atgagcggac
     1861 ctaccgggag caagaaccat gagggcgaag cttggctgcg gtctggggct gcgcagcgaa
     1921 ctccgatgat ccgcaacata gtcacagaac tggcgctgtt tctcacgccg ttcgtagctt
     1981 atgcgctgtt tttgtgggcg acgcgtgccg gagtgctcga cgtttcagct tggtcgctgc
     2041 cacggctcat gtggctcgcg agtgcggcat tggtgttgat gattgcgagc ttcgtggttc
     2101 tggcgcaatt cagcggagtg ccgcctggct tgacctatat accggcccac ctggagaacg
     2161 ggcggctggt gcccggcact gaaagatgac cgcgtcccta cgcttgccgg acgccggctg
     2221 gctcggtgct cccgcgcttg cgcgcgtgct ttcgatcctt aatggcgacg gcgaagaggc
     2281 gcgcgtcgtc gggggcgcgg cgcgcaatgc cctgatgggg ttgcccctga gtgatatcga
     2341 catcgccacc accgcgcagc cggatgaggt ggtgcgcagg gcgacagcgg atggattgaa
     2401 gacggtaccg accggcatcg accacggtac cgtcacgctt gtggtaggcg gaatgccgtt
     2461 cgaggtcacc acgctgcggc gggatgtcga gacctttggc cgcaaagcca aggtggcatt
     2521 tgggcgggat tggaaagtcg acgccgagcg gcgcgacttc accatgaatg cgctatcgat
     2581 ttcgctcgac ggaaccgtgc acgactatgt cgacggcctc gccgatctaa gggcgcaccg
     2641 cgtccgcttc atcggcgaac cggcgcgccg tattgcggag gattatctgc gcatcctaag
     2701 gttcttccgt tttcatgcct cctacgcaca cgggccccct gacccggcgg ggctacatgc
     2761 ctgcatcgcg gcgcgagacg ggctgcgcac cttgtcgcgc gagcgcgtcc gagccgagct
     2821 gatgaaattg ttgctcgcac cgttcgcggt gccgaccctc gcggtaatgg tggaagcggg
     2881 ttttgccgcg ccactgctcg gcggggtggc gctgctcgca agcttcgcca acatgatcaa
     2941 ggtcgaagaa gcagcagcag tcgcgccaga cgcggtgcgc cgccttggtg cgctcggcgt
     3001 tttcatcgcc gaggatgtcg agcggctgcg ggaaaggttg cgcctgttca acgccgagta
     3061 cgagcgccta gccgccatgg cggaccggtg gtggcgcgta tcgccggcgc tcggtgaggc
     3121 cggcgcccgc gcacttcttt atcggctcgg gccggttgcc tatgttgatc gcgcgctgat
     3181 cgcctggaca cgggcaccgc agggcgccgc cgatccggcg tggcacgacc tcgccacgct
     3241 gccaatgcgc tggacggcac cacgctttcc gctcaagtcc gctcacctgc ttgcgcgcgg
     3301 cgtcgccaag gggcctgcgc ttggagcagc catgcgtgct gctgaggact cctggatcgc
     3361 tgctgagttc ccgctggatc agatcaccct ggatcgtatc gcggatgctg cggcacagag
     3421 cgcgacagtg gtataggctt tgaacgtgtt cgccttggcc ggcggcatct gcgcaaactc
     3481 tccgcaaggc acatcctgtc ccccttcgac gatatttcga tcccgcagct gttgctgatc
     3541 gcggtggtgg ccgtgttcac ctcgctgctt ggaggggtcg cgggctacgg caccggggcg
     3601 ctgatgcccc tggtgctggt cccgatcgtg ggacctgagc cggtggtgcc gattatcgcg
     3661 atttccgcgg tactcaccaa tctgagccgc gcgctggcgt tccgtggcgc gatcgactgg
     3721 cggcgggcca aactcgtcgt tttcgccgcg ataccgacct gcattctcgg cgcctggggc
     3781 tatacgctgt tgtccggacc tggcgccatg ctgctgatcg gcgcgatgct ggtcgtggcg
     3841 gtgctgctcc gccgtatcgt cgggcgttac ggctttacgg ttcaggaccg cgggcttgtg
     3901 gtgggcgctt gtggctgggg cctcgtggtg ggcggcacca acggggctgg cgtcatcatc
     3961 atctcactcc tgatggcagc aggcctcacc ggcgctgccg tgatcgcgac cgatgccgcg
     4021 ctctcggtcg tcgtcggcct cgtccggctc acggtgttcg gcattgccgg cgttgcaacc
     4081 gccaaggtca tggcggtcgc gcttctcatc ggcgcggtga cgcttccggg cgcattcctg
     4141 gcgcggctga tcgtcgagcg cctgccgatc cacgtccatg ccgccatgct cgacgtcgtc
     4201 gtggtgctcg gcggggcggt gatgatcgcg ggggcggtcg ggaagatggg gtaggtgccg
     4261 gcgccgattg gctcatctcg gcaagtgcga aaaccttctg gctatccggt cgtattactg
     4321 cgcgcagcac gctggcggtg tgcctcgccc ctttcgcgca tgcggctaaa tcatgtagct
     4381 tggttgccaa gccgctggca ggagacgccg aagtcccctt gttgcggcag catgggcgca
     4441 gagcggaatt cgatcgacga cactcggtcc gagcagggat agcgcgcttt gcttgcgagc
     4501 cagaatattg cggggaaacg cgcatgaaat tcacacgccg ccgcttactg caattcaccg
     4561 gagctggtgc ggccgctccc atatttgcaa aacgcacatc ggcgctcgat tatccgacgc
     4621 ggccggtgca cgtcattgtt ggttttgccc cgggcggcgc gcccgatatc gtggcgcgcc
     4681 tgcttggtcc gtcgctgacg gagcgtcttg gccagtccat catcgtcgag aatcggaccg
     4741 gcgccgggag caatatcgcc accgaggcgg tcgtgaacgc gccgccggat gggtacacac
     4801 tgctgttggt tagtccgccg aacttcgtca acgcgacgct ctatgacaag ctcaatttca
     4861 atttcatccg cgacatcgcg ccggtcgccg gccttatccg ggtcccaaac gtgatggagg
     4921 tgactccatc gcttccggtc aaaacggtcc ccgagttcat cgcctatgct aaggccaatc
     4981 cgaacaagct caacatgtca tccggcggca atggaacatc tgtgcatgtc gccggcgagc
     5041 tgttcaagat gatgaccggc gtgaaaatgc tccacgtacc ctatcgcggt gtcggtgcct
     5101 cctatccgga cctgctcgcc ggacaggtcc aagtgatgtt cgactcgatg ccgggctcga
     5161 ttgaattcat caggtccggc cgcctgcgtg cgctcgcggt cgcttcggcg acgcgctcgc
     5221 cggcgctgcc ggacgtgccg accgttggcg aatttgtgcc cggctacgag gcgagcgccg
     5281 ttcacggcgt cggcacaccc cgtaatacgc ctgcggagat tgtcgataaa ctcaacaagg
     5341 ccatcaatga cgcgctcgcc gagcccgcca tcaaggcgcg ccttgccgac atgggcgcca
     5401 cgctgcttgt ggggtcgccc gccgacttcg gtaaggtcat cgtggacgag accgagaagt
     5461 gggccaaggt ggtcaaattc tccggtgcac ggccggattg atcctcgtca ttgggcaata
     5521 tcgcatccac attgccgctg gtattggccg gcggcgggcc gattacgtcg cggtgcattc
     5581 gctcaatcgc ttcccgcgcc gtaacgtcgt aatcgtcttg gtaattctta acgtaacgtc
     5641 acctttggtg tagcgcgatc cggatggtga gaaacgccgc ggaagtgaca tggcttttcc
     5701 atcgagctgc acatgcgcag accggtcgcc ctcgacgaaa gcaacaacaa actccacgcc
     5761 atcgccgcaa tggtaggtga ggaacgattg ggcgagcacc ggcgatggac cgatcacgag
     5821 acccaccgca ccaagccatc ggatgaaatg tcgtcgcatt tgatgcctca cctggtgggc
     5881 tcatgccgcc ctacggtgct tttttttaaa gtcgtgccgc caactcatac caaggatggc
     5941 ttccaactca taccaaggac ggtctcagct gacgagctgt gccgatacat ggcaggtgca
     6001 gcctcgcacg acgttgttgc tggtcttgcg gcgcctgtcg aagtactcga tccgtagaga
     6061 cgaattgcaa caatccgacg acttgtttaa gtttccccgc tggagggcat ggggttgtat
     6121 tccgcgacac cgaacagggt cgtctcgatc cagtatttgc gcgcgctcgc cgcgatcctg
     6181 gtggcggtgc agcatgccaa ttcgggcccg atccatctgg acatcgtcag gcccgatctc
     6241 ggggcattcg gcgtcgatct gttcttcgtg atctcgggtt acgtcatgtg ggcgacgacc
     6301 gccgtgaccc cgcgcacgcc ggggcaattc tggggtgcgc gcattatccg catcgtgccg
     6361 ctctattggg ccttcacctc actctatctg gccatcacgc tgctacatcc ggcagccctc
     6421 cagcatccgt cgaccgatct aacccacatt gtgaaatcct acgccttcgt gccggccgtt
     6481 catcccgcac tcggaggtat tttgcctgtc tatacgttgg gctggacgct gaactatgaa
     6541 atgttcttct atctggtatt tggcatcgcg ctgctggtgc agagccgggc ggctcggttg
     6601 gcagtcgtgg cgttggcgct cggcggcctc gtctctgccg gatttgcatg gcgcccgacc
     6661 gatccgatcc tgcagactta tacgagcgag ctactgctcg aatttctgtg cggcactctg
     6721 attgctgcag cgaccgagcg cctgatgtcc tggggcgcgc gcgccgccgg cccgatgctc
     6781 ggcgttgctg cgatctggct cggtgcagcc tattccggcc agatcggcgg tggccgcttc
     6841 gtcatgttcg gactgccggc cgcgctgacc gtcgtcgcgc tgctggcatt agaacgctcc
     6901 ctgcgaacac ggccgctgaa gttagggctg ctgatcggcg acgcctctta ctccctctat
     6961 ctctgccacc cgtttgcgca gcgcgctatc tatttggtgc taccgaccgc ggcggcggct
     7021 gccaacccgg tcatcggtct ctttttcata gccgtcgcct ctctggccgc gatcctgtgc
     7081 gccatcgcgg tatatagggt gatcgagcag ccaacgatgg cagtgctgcg gggtgccaga
     7141 cgtttcccgc tctccgaaac ctacgcaaag ttgagctaag ctttcgcaaa gctcgccaat
     7201 gccgttcggt tcctgcttct tcgaggcccg tttcacgcag atcttgcgag ccgcgccaga
     7261 gcattcctcg ccacaggctg acaccgcaga gcttgcggcc agacgttcaa gattttgcgc
     7321 cgccatgaaa ccgcagtgcg cgtaacgaaa cacccgttgc aacaagtcca gttcggcttt
     7381 caccgaaccg cagcaagaac aggtcttgaa ggaaaccacc gattgcgtct taccgcttcg
     7441 gcggcgcgaa acagttccgg gggcagcttc gcgcacatta caagattact attttagccc
     7501 tctgcgcccc tcgtgagcaa gatcgcatag ccagcggggt atgatgcgat ccggataggt
     7561 gaagcggcga agcacaacgt tttgcacttc gccaggagct cggagccgtt tatccgccgc
     7621 caccagcagc cggcgtccgt gccgccacgg gtccgacgat ccgctcaaaa tcggcgtgcg
     7681 agccgggatt gccgtggatc ggtacatgct gcgccacatc cagcttcagc cgcttgaggt
     7741 tccggaacag cgcaacggcg ttcaggttca cattcgcagg cgtcgctccg ggaggtggcg
     7801 gcccgtacag atcggcattg atgacgatct tttcctgtgg caggtacgcg atcagcatgt
     7861 cgttggcatg attgagattg tcgacatgat acagcaggat gctgcgctgc ccgtcgctga
     7921 tcgaatattc gtccgaaaac gtctgcagca tcagtggacc ggggccggtc ggggcaaacg
     7981 ggaactgtga cagccggtcg ggctccaagg ttcgcgactg cggacccaag accaccttct
     8041 ggaaatagtc tttgttgtgt tcctcggcga tgaccgtcgc accttcggcc gcgtaggttc
     8101 gcactccccc gagatgatcg aagtggtggt gcgtgacgac gagatagcgg atcggcttgt
     8161 tggggatggt tttcttgatt tccgcgatca cggcgttcga gcgggtctca tttccaggag
     8221 actcgatcac cgcgataaag tccttgaact caacggccac gctgttggcg ttgctgccgc
     8281 ccatgagcca aacgccatcg ccaagctttt gcgcggtgac gcgcacctgc ggagcgggag
     8341 cattgcgcac gctgtcggga accggaaccg cggcatccgg tacgttcacc ttggcgtcgg
     8401 tgacccgcac ttccatccag ttatggccac ccggcaccaa cgcattgtcg ccctgatggg
     8461 cgtgcgtgcg gaacgggaac ttggcaccac cacccacatc gcggtaatcg ctgtaccgga
     8521 tctccaccat catgtcgccg agaaccgggt cgggaaccca cgtgatcacc cgctcgagca
     8581 ggttgtcgtt attgaactcg ccggtcaccc ggtatttgcc catggtggtg aagcccacga
     8641 ccttgagcgt gcggttttgt cggacgtaat agcggtcctc aaccgtcgca ttcccggcct
     8701 gctgggcggc tttgatgaat ccatgcgggc tgagcgagat cagtaactgc cgatactcga
     8761 ccgcagcggg ttgcggattg ggctgtcctt gcgggttcaa gttccaggca tagttgccgc
     8821 tgacaaagtt tgtagtgtgc acctcgcctt ggagcggaac gaagccgccg ccgcgcggcg
     8881 cgttgttgcc ctgaacgcgc acatgatcct ctttcaggga tttgccagca tagtcgatgg
     8941 tcgcgacata actcttgaag tccgttcgcg gccaatccga atcggttccc tcggtagcga
     9001 agctctggcc cacggcgccc atccagcccg taccggaata cacaaccgaa ttcaccgcac
     9061 tggcgcccat cgctttgtcg gcggcctgca acaagcttgc ggcattttgc gcggccgccg
     9121 gcccggccat caaggccgat cctgccaaca acattgccag tttgtatctc ataccgcttc
     9181 ctcccagaaa cgacccaaga ggcttgccga actcaaccga tgaatgcgta atgctggtaa
     9241 gcctgacttt gggacttgcg tgcccgccca gaccttcaag acactagctg atcgaccatt
     9301 ggctgtgaag cggtgcccta ccacggctct ggagcctcgt catgcgcaag ccgagacagt
     9361 tcttgggcgc cgttcctgct acggccactt caccaccggc ggcatcgacg agaggatcga
     9421 atccacgttg ccgccagtct tgagtccgaa tacggtgccg cggtcgtaga gcaggttgaa
     9481 ctccacgtag cgcccgcggc gcacgagttg ttcctcgcgt tgcgcctcgt tccatggcgt
     9541 cgcgaaatta cgccgcacca actcggggta gatgttcacg aaggcgcggc cgacgtcctg
     9601 ggtaaaggcg aacgccgcct cccaatcggt ttccagatag tcgtagaaga tgccgccgat
     9661 gccgcgcatt tcgttgcggt gcttgaggaa gaaatactcg tcgcaccact ttttgtactt
     9721 gtcgtagggc gcgaccgctg cgtgggcgtc gcaggccacc ttcatggcag cgtggaacgc
     9781 gaccgtgtcg gcatcatcct gggtgcggcg cttgtcgaga accggggtga gatcggcgcc
     9841 gccgccgaac cacgccttgg tggtgacgac gaaacgggtg ttcatgtgca cggccggcac
     9901 gtgcggattc cacagatggg cgatcagcga aatgcccgag gcccaaaacc gtgggtcggt
     9961 gtcggcgccg ggaatctgat tgcggaattc cggtgcgaac tcgccaaaca cggtggagac
    10021 gtggacgccc actttctcga acaggcgccc cttcatcatc gacatgacgc cgccgccgcc
    10081 cggcgcgccg gtgtgatcat tgcgtgacca cggggcgcgt tcgaaccgac ctgcggcacc
    10141 gccataaaga gatggcggcg cggcggcctc cagccgctcg aacgccgcgc agatatcgtc
    10201 gcgtaatgcc tcgaaccagg ttttagcgca cgccttgcgc tcctcaagtt ggctgtcgtc
    10261 catttccccc accttgcatc atgcgcgagt ccccaattgc tgttctcggt ggcggtgagc
    10321 ccatttccgt catatcagcg aacagattag gggtcgacgg tgatgatcat ctatggtgtt
    10381 gatcgcccga tgccatttcc gaaaggcgaa taccgatgtc ttgcctcttg ccgtctcgtc
    10441 tggcctcaaa accgaatgat ttttccgtca atcgccgccg gttgatcggc ggactcgccg
    10501 ccggctgctt cggtttgatg gcggggcccg ttgtgatcgg cggcgcgatc gcgcaagcca
    10561 ggcgttggcc agctgatccg ttcagcctcg gcatcgcgtc cggcgcgccg cgtccggacg
    10621 gttttgtgtt gtggacgagg ctcgcgcccg atccgctctc gatcaatccg gcgacccccg
    10681 gcggcatgac gggtggggac gtgccggttg cttacgagat tgccggtgac gaggcgatgc
    10741 acgacattgt tcgccgcggc gtcgctgatg ccgaggcggc ctatgggtgg tcggtccatg
    10801 tcgacgtctc cggcctgcag ccgggtaggc cctattggta ccgcttccgg agtggcgatg
    10861 cagtcagcca gactgggcgc gccatgacat ccatcgcggc cggaacgcca gtggaacgca
    10921 tgcggttcgg cttcgtgtct tgctcccatt acgagctcgg ctatttttcc gcctatcggc
    10981 atctcgctga tgaaaatccc gacatggtgt tgttcctcgg tgattacatc tacgagggcg
    11041 cccagcaggg ccgcgtccgc acgcacagcg acggtatcga agccgcgacg ctgccaacct
    11101 accgcaaccg ctatgcgcag taccggcttg atgccgacct gcagcgcatt cacgcccagg
    11161 cgccatcgct cgtcacctgg gatgaccatg aagtttccaa cgattatgcc gacaagtggt
    11221 cgcaatatta cgatgatccg gagctgtttc tgcgccgccg cgccgccgct tatcaggcgt
    11281 tctacgaaca catgccggtg aggccgatcc tctcgcgccc ggaaggaccg gtcatgcgca
    11341 tctacgatcg tttcaccttc ggcgacctcc tcgaaatctc gatgatcgac gggcggcaat
    11401 atcgctcccg cgcggcctgc tatgagcctc ccaaccggct tcgcgggcat ttcgaaaccg
    11461 atgcggcctg tccggaacgg cgtgccgaag gtcgcaccat gttgggatat gcgcaagaaa
    11521 actggctcgg tctcggcttg gctcaatcca aggcgaagtg gaacgtgatc gcgcaggacg
    11581 ttctgatggc gcagttgcgc cgcaaagtga ccgacggcaa tttcgggttc tggaccgacg
    11641 attgggatgg ctttccggcg agccgccggc ggctgctcca aagtatcgtc caggcgcgta
    11701 cttccaatcc ggtggtgatc gggggtgaca tccatgcgtt ctttgccaac gacctacgag
    11761 tcgatttcga cgacccgaat tcgcccgtgg tcgcgaccga attggttggc acctccatat
    11821 cgtctcaagg cccgccttat caggcgattg ccgacgttct gcccgacaat ccgcatgtcc
    11881 gtttcttcga aagccgcaag cgcggctatg tcagcgtcca agtcgacgcc aagcaaatga
    11941 cggcgcagct gcgtgccatt tccgacgtta cggacccgaa agcgagcgtg tcgaccctga
    12001 agacgttcgc ggttgagagc ggcaagccag gggtggtggg ggcgtaaata tcccctcgac
    12061 accgagggcc tcagataagt gacgcgaacc ccatcgatgg ccgtgcggcg ttgagaacct
    12121 cttgatgggc cttgctgccc taaaagctgc ccacctgccg cagcgcttcc cccaccgcca
    12181 tcgcacacac gattgcgaca ttgatcgatc tcatcccggc gcgcatcggg atgcgcagcc
    12241 gtacgtcggc ggcttcgtgc acgtgatcgg ggacgcctgc agattcgcgg ccgaacagga
    12301 gtatgtcgcg cgtttcgtag cggtgatcga gataggaggc agttgccttg gtggtgaaga
    12361 gcaccagccg taggccctgc gccgcgcgcc agcactcgaa atccgaccat gatgggtgcc
    12421 ggatcagcac gacctggtcg aggtagtcca taccggcgcg ccggaaggcg cggtcgctga
    12481 ccgggaatcc ggccggctcg atgagatgag cctccagtgc caggcacgcg gcaagacgaa
    12541 gcatcgtgcc ggtgttctga ggaatatcgg gctcgaacaa cgcgaatcgc atagggcccg
    12601 ccatggcatt gcggcagcaa gccgccgaga tcgatcgaca tccattatca tttggtacaa
    12661 gggccccgtg ggcggcagcg ttagcgggct tgcgctccgc cggcaagggt gccaataagc
    12721 cggcgcaatg gtgcgggcca tatgttctca tgagtgctgc ttcccgtgag tgcgcaggtc
    12781 gctgttgcta ttgtcgcacg ggaggcttcg tagggcgctc aggcacttag gccgggccgc
    12841 cacgtgggtg ggcccgaaac gagacggagg atggaatccg tgacgactat gtcagcggcc
    12901 gagccgacgc gccgtgattt tctctttgtg gcgaccggag cggtgggtgc catcggcgcc
    12961 gctgctacgc tggtgccgct gatcgcgcag atgaaccccg acgcctcgac catcgccgcc
    13021 ggcgcgccga tcgaggtcga cctggc
//
LOCUS       DATILV010000326         5278 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_846488, whole genome shotgun sequence.
ACCESSION   DATILV010000326 DATILV010000000
VERSION     DATILV010000326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5278
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_846488"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..355)
                     /locus_tag="VLJ17_07425"
     CDS             complement(<1..355)
                     /locus_tag="VLJ17_07425"
                     /inference="COORDINATES: protein motif:HMM:NF018180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxide hydrolase N-terminal domain-containing
                     protein"
                     /protein_id="HSV22845.1"
                     /translation="MLEPFNIAVPEEVFQDLRRRLDTTRLPSAGERGWEDGTDPAYLR
                     SLVDYWRDGFDWRAQEALLNRFGHLRGTIDGTTIHLIHEKGRGPAPLPLILTHGYPDS
                     FFASSGESVGDLAPVD"
     gene            801..1493
                     /locus_tag="VLJ17_07430"
     CDS             801..1493
                     /locus_tag="VLJ17_07430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22846.1"
                     /translation="MLVADPTDHGDLEAPATRALEFVAVEERDELIVILGSCQGADVS
                     YERIGITNRFSAVRRQAISSERIRVDSGEQIEAGDVVRNRRHQLRGTSWCGAMMRLRQ
                     PSFPGTHRQHRPTGRTRARSGKPGNKLLSMNAGNVMQITRHDKSYIVELEDGSRWRVW
                     PADIAAILQWLPTTELEVLAIDDEFCSHALINQTYGSQVGVIKAEADWPAERARRHLK
                     HGRDHKTEILRK"
     gene            1550..2407
                     /locus_tag="VLJ17_07435"
     CDS             1550..2407
                     /locus_tag="VLJ17_07435"
                     /inference="COORDINATES: protein motif:HMM:NF022750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HSV22847.1"
                     /translation="MILRSITARTAQGANLYAGLALLVSVVLLHDHAHAQTRLEADYV
                     ISFARISVGNVSVTTDIDSAAYSISASGRVGGAARMLAEGEANLNTRGTITSSRPMPT
                     TFVFKIDSTDDPVDVKMMIMDGNVTELTALPPSGGRVPINDAHRQGILDPLTAFLVPA
                     GDTGDGLTKEACQRTLPVFDGLQRYDLILAFRRFDKVTAGKGYSGPVVICSVSYRPIA
                     GHRVLPPLAKYLSESREIEIAFAPVPGTRLLAPFRLLVANLLANVVVQANRFDTTIRA
                     VPNSNPGTP"
     gene            complement(2601..3662)
                     /locus_tag="VLJ17_07440"
     CDS             complement(2601..3662)
                     /locus_tag="VLJ17_07440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HSV22848.1"
                     /translation="MPDQAKSAPAISPHGATRLPAVDVESYNVELKDDEGFVGDRASK
                     GAFRAIIERWRRPLRELGHDPFGEQPSDSIEKKRLDALLATGDPEAAGIVQGAIEEFA
                     QELALVTRRFLKLKGWKDAERIVIGGGFSGSRVGELSIGRASVILKADKIKVEIAVIR
                     HDPDEAGLLGAVHLAPSWIFQAHDAILAVDIGGTNIRAGVVQLNLKRAANLSKAQVGP
                     FELWRHGDERLNRDDAVEGLIDMLRRLINRAGKSGLRLAPFVGIGCPGKIEPNGSIDR
                     GAQNLPGNWQSSRFNLPVTLFEAIPKIGEFETSIVMHNDAVVQGLSEVPFMRDVETWM
                     VFTVGTGLGNALFMNRRPG"
     gene            complement(4020..5162)
                     /locus_tag="VLJ17_07445"
     CDS             complement(4020..5162)
                     /locus_tag="VLJ17_07445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019903388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative zinc-binding peptidase"
                     /protein_id="HSV22849.1"
                     /translation="MKLFECQNCRQPLYFENTRCESCGLSLGYLPGRDVVTALKPDRA
                     KPDHAMWRALAHPCGRYRLCANATYGVCNWLIPSDVPEQFCAACRHNRTIPDLSQASN
                     REHWRLLEIAKHRLFYTLLRLRLPLKTRTEDPNGLAFDFLGDDVGAGPAPLMTGHANG
                     VITINLAEADDAEREHRRRQMGEPYRTLLGHFRHEIAHYYWDRLVAGTPSLDAFRQVF
                     GDERGDYAVALQRYYASGAPADWPEHFITAYATAHPWEDFAETWAHYFHMIDTLEIAG
                     SFGLVVAPKLSKGLAARTNFDAHTADMDRLIDAWIPLTFAANSLNRSMGLPDLYPFTL
                     SAPVIAKLAFVQARIHAHARRRPTPNGGIGAVFAGLRRRAGMATQR"
BASE COUNT         1059 a         1545 c         1591 g         1083 t
ORIGIN      
        1 catcaaccgg tgccaaatcg cccacagatt ctcccgagga ggcgaaaaag gaatcgggat
       61 agccgtgcgt caggatcagc ggtagcggag cggggccacg ccccttttcg tgaatcaggt
      121 gaatggtagt cccgtcaatg gtcccgcgca aatgcccgaa gcggttaagc agcgcttctt
      181 gcgcgcgcca atcgaagccg tcgcgccaat aatctaccag ggaacgtagg taggccggat
      241 ccgtcccgtc ttcccatccg cgctccccag cggatggcag gcgagttgtg tcaagacggc
      301 gccgtagatc ctggaaaact tcctcgggca cagcgatgtt gaatggttcc agcatcgttc
      361 tcgtcacctc caagccccgg caccagatcg gagcgacctt tccgaaccga ccccgtcggc
      421 gggccgtgtg cgtttcttgg ctctccgtca tgccactgtt ttaaaataac gttggccgga
      481 ataccgggtt cctttgcttg agcagtgagc cgcggccact ggtcgcgcaa attgaaagcc
      541 tccagactcc agccacatct cggcgaaaga ctgacggttt ctcaactaat accggctcca
      601 tgcctgattg gatctgcagc atttctggct cgcccgcgag agcgcaatat gatgcgccgt
      661 agccatctga ggcttctttc atccattcca tttcaatgac gtggtgcagc gaagacagcg
      721 ccactcctcg tttcgttctt gccagttcat ctatccatcg tcgttttcgt ggacaggttt
      781 gtcagactag ggtgaatgtg atgcttgtgg cggatccaac ggatcatggc gaccttgaag
      841 cgcctgccac tcgagctctt gagttcgtcg cggttgagga gcgcgacgaa ctcatcgtca
      901 tcttgggtag ctgccagggc gcggatgtga gctacgaacg catcgggata acgaaccgct
      961 tcagcgcggt tcggcgacag gccatttcga gcgagcgaat tcgggttgac tcgggggaac
     1021 aaatcgaagc tggcgacgtt gtgcgcaata gacggcatca attgagggga acctcatggt
     1081 gcggcgctat gatgcgtctg cgtcagccgt cgtttcctgg aacgcaccgg cagcatagac
     1141 ccacgggcag gacccgtgcc cgttcgggca agccgggcaa taaactcctt tcaatgaacg
     1201 ccggaaacgt catgcagatc acgaggcacg acaagagtta catcgtcgag ctcgaagacg
     1261 gctccaggtg gcgcgtttgg ccagccgata ttgccgcgat cttacaatgg ttgccaacta
     1321 ccgagcttga ggtcttggca atagacgacg aattttgctc acacgccctt attaatcaaa
     1381 cttatgggtc ccaagtaggt gtaatcaaag cagaggcgga ctggcctgcc gagcgagccc
     1441 gacggcatct gaagcatgga cgggaccaca aaaccgaaat tcttcggaag tgaaatagca
     1501 gcgcaagagc ttccgtgtgc gttcgcgctg ttcaggggat gaattgaaaa tgatattgcg
     1561 ttcgatcacc gcccgcaccg ctcagggcgc gaatctctac gccggcctcg cgcttctcgt
     1621 gtcggtcgtc ttgctccatg accatgcaca cgcgcaaacc aggttggagg ccgactatgt
     1681 aatctcattc gcacgcattt cagtcggcaa tgtctccgtc accaccgaca ttgatagtgc
     1741 cgcgtattcg atttccgcga gcgggcgcgt tggcggcgcc gcccgaatgt tggcggaggg
     1801 tgaggcaaac ctaaacactc gcggcaccat cacgagcagt cggcccatgc cgacaacttt
     1861 tgtgttcaag atcgactcaa ccgatgatcc cgtagatgtg aaaatgatga ttatggacgg
     1921 caacgtgacg gagctcaccg ctttgccgcc aagcggcggc cgtgtgccga taaacgatgc
     1981 ccatcgccaa ggaatcctgg atccattgac cgcatttttg gtccctgccg gggacacggg
     2041 cgatggtctg actaaggagg catgccagcg cacgctaccg gtatttgacg gccttcagcg
     2101 ttatgatctg attctggcct tcaggcgctt tgacaaggtt accgccggca aaggctattc
     2161 aggcccggtg gtcatctgtt cggtgagcta ccggccgatc gccggccatc gagtgttgcc
     2221 cccacttgcc aagtacctct cagaaagccg cgaaattgag atcgcattcg ctcctgttcc
     2281 cggcacacgt ttgctcgcgc catttcgtct attggtcgcg aacctgctcg ccaatgtggt
     2341 agttcaggct aaccggtttg atacaacaat acgggcggtg ccgaattcca acccggggac
     2401 accgtaacgg ctcttcggag ccgcgcggtc gcgatatcca attgatacgg gggtggcatt
     2461 gtacgctccg acaatcacgc agcgtggggc cggcgactgg cgtcgaaacg ggctcttccg
     2521 atatggtcac tgcgatggcg ggccgttgcg gccgcaaagt tcctgccgcc agcggcgaag
     2581 tagtcggggg attttgtgcg ctagccgggt cgccgattca tgaaaagagc gttgccaaga
     2641 cccgtaccga cggtgaacac catccacgtc tccacatccc gcatgaaggg tacttcgctc
     2701 aacccctgca ccacggcatc gttgtgcatc acgatcgagg tttcgaactc cccaatcttc
     2761 ggaatggctt cgaatagggt gactgggaga ttaaaccggc tgctctgcca atttcctggt
     2821 agattctgtg cgccgcggtc gatcgagcca ttaggctcga tctttcccgg gcaaccgatg
     2881 ccgacgaacg gcgcgaggcg caggccgctc ttcccggcgc ggttgatcag gcgtcgaagc
     2941 atgtcgatga ggccttctac agcgtcgtca cggttgagcc tttcgtcccc gtgccgccat
     3001 agttcgaaag ggcctacttg ggctttcgaa aggttcgcgg cgcgtttgag gttgagctga
     3061 accacgccgg cccggatgtt ggtgccgccg atatccactg ccaggatggc gtcatgggcc
     3121 tggaatatcc aggaaggcgc gagatgcacg gcccccagaa gacctgcctc gtctgggtcg
     3181 tggcgaatga cggcgatctc gaccttgatc ttatctgcct tcaggatgac cgaggcgcgg
     3241 ccgatagaaa gttcgccgac gcggctgccg gaaaagccgc ccccaatgac aatgcgctcg
     3301 gcgtccttcc atcccttgag cttcaggaat cgtcgcgtga caagcgccag ctcctgagcg
     3361 aactcttcga tagcgccttg gacaatgccc gccgcttcgg ggtcgccagt agcgagcaac
     3421 gcatcaaggc gctttttttc tatggagtcg ctgggttgtt caccgaaagg atcgtgaccg
     3481 agttcgcgca gaggtctgcg ccatcgctcg atgatggcgc gaaacgcgcc cttgctggct
     3541 cggtcgccga caaagccctc atcatccttc aactcgacat tgtagctctc tacgtcaacg
     3601 gcaggcagtc gagtagcgcc gtggggcgaa atcgccgggg cagatttggc ttggtctggc
     3661 atttttggat ccccgtgagt gcgcgggaat aacctttgtg gccggtaatg gttgcacgaa
     3721 tgcatcttcg acgccgcggt tgcaccgggg cctcggaagt gtcgttagag acgtgggttt
     3781 ttccaaagtt cggacagcag gcttgggccc gcggcgcact gttatttgga cgggttcgtt
     3841 cgagatacgg ccagcctcga tgagcgcgcc cattcgtcgg actacgaaag catggaatcg
     3901 gccaagatgt ctcgcggagc aaaaagctgc tttgagccgt tgagggacat tctccaggcc
     3961 ttccgtgatg gattttccgc gcggacgcac cggtaacgca atcgatcttg aaagcgcgtt
     4021 caacgctgcg tcgccattcc ggcgcgccgg cgcaagcccg caaataccgc gccgataccg
     4081 ccgttcggcg tcggtcgccg cctcgcatgg gcgtgtatgc gcgcttggac gaaggcgagc
     4141 ttcgcgatga ccggagcgct cagcgtgaaa gggtagagat cgggcagccc catgctgcgg
     4201 ttaagggaat tggccgcaaa ggtcagtgga atccacgcgt cgatcaagcg gtccatgtcg
     4261 gccgtgtgtg cgtcaaaatt ggtccgggcc gcgagtccct tcgacagctt cggcgccacc
     4321 acgagaccaa acgagccagc gatctcaagc gtgtcaatca tgtggaaata gtgcgcccac
     4381 gtctcggcaa agtcctccca cggatgagcg gtcgcatagg cggtgatgaa gtgctccggc
     4441 cagtcggcgg gcgccccgga cgcgtagtat cgttgcagcg ccacggcgta atccccgcgc
     4501 tcgtcgccaa atacttgccg aaatgcgtca aggcttggcg tgccggcgac aagtcggtcc
     4561 cagtagtaat gcgcaatctc atgacgaaag tggcccaaca aggtgcggta gggctcgccc
     4621 atctggcggc gccgatgctc acgctcggca tcgtcggctt cggcgagatt gattgtgatg
     4681 acgccgttgg catggccggt catcaaaggg gccgggccgg cgccgacgtc gtcgccgaga
     4741 aaatcaaatg caagcccatt cggatcctct gtcctggtct tgagcggcag acggagcctg
     4801 agcagcgtgt aaaacagtcg atgcttggcg atctcaagca ggcgccagtg ctcccggttg
     4861 ctggcctggc tcagatccgg aatggtacga ttgtggcgac aggctgcgca aaattgctct
     4921 gggacatccg acggaatgag ccagttgcag acgccgtacg tcgcattggc gcaaaggcgg
     4981 taccggccgc acggatgagc gagcgcgcgc cacatcgcat gatccggctt ggcacgatcc
     5041 ggcttgaggg cggtcacgac gtctcggccc ggcaggtatc cgagcgagag cccgcagctt
     5101 tcgcaccgcg tgttttcaaa gtaaagcggt tgccggcaat tctgacactc aaatagcttc
     5161 atggccgacc gcaacgcccc gatgagtcca tcacgccgcg ccttccatca taacggggag
     5221 cacagacttt gccgtgtgtg gcacaggttg agttaagatg cttcgaacgt tgcgcgtt
//
LOCUS       DATILV010000327         3584 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3146004, whole genome shotgun sequence.
ACCESSION   DATILV010000327 DATILV010000000
VERSION     DATILV010000327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3584
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3146004"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..575)
                     /locus_tag="VLJ17_07450"
     CDS             complement(<1..575)
                     /locus_tag="VLJ17_07450"
                     /inference="COORDINATES: protein motif:HMM:NF025091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/PEP mutase family protein"
                     /protein_id="HSV22850.1"
                     /translation="MARLAEEAGFKAVYLSGGSLGWLKCVTEANLTLPELAAVALDMR
                     AVCQLPIVLDAGGGWGDPVHVHRTIALAEAAGFAAIEIEDQLLPRRVEHHVGVDHLIP
                     TELMLKKIAEAIAARTDPDFVIIARTNARRVYDLDEALRRAEAFHRAGADMLFVHTRN
                     AEEMRVVGERLPPPLMTFAPPDGFSEFLYSPR"
     gene            complement(830..1690)
                     /locus_tag="VLJ17_07455"
     CDS             complement(830..1690)
                     /locus_tag="VLJ17_07455"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HSV22851.1"
                     /translation="MIKFDYHEPTTLKKAISLMERHGEDARVIAGGTSLIIMMRQRLL
                     MPKVVISLARIPKLDRIAYNSNHGLRIGAGARHRDIELCAAVQKHYPLLHETFRKVAQ
                     PRIRNMGTVGGNLAGGDPLTDPGASLIALDAEVTLSSSKGQRRLRLDEFFIDYYQTAL
                     EPGELLTEIHVPPPQRPGWSHIKFTPRSIEDFATVGVAITLQAKNGICEDVRLGLNSV
                     ASTIVRAKKAEEVLRGKSIDDATLQKMGEVAATECDPTDDNRGSAEYKREMVKVLVRR
                     AAQEAFQRLP"
     gene            complement(1687..>3584)
                     /locus_tag="VLJ17_07460"
     CDS             complement(1687..>3584)
                     /locus_tag="VLJ17_07460"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSV22852.1"
                     /translation="GVFDAEEAMKDDAPLVHDDKPNNIAMTMNIERGNIAQAFAESDV
                     IVEDTFTSMPQWHCSIETIGSVAEYGANGKYTIYMNTQTLFSARLRIAAALGVPESDV
                     RVIQSAVGGGFGGKSCDDNNALVAAVLAKKAGKPVKLINSREEEFLAGCRPRVFMKIN
                     VKVGFKKDGRIRAKHIKVIADNGAYSAKAPAITGVAAMRHDTCYKYSDVKTEALLVYT
                     NKIPTGAFRGFGNPSAEWAVEQAIDLGAHELGIDPIEIARINAAEVGYVSPHGNRVTS
                     CELKQCLDMVDKMIDWKAKRANRRPNTGLGLACTVHVSGKRHFGDYDGSSATIKINED
                     GKALILSGEGECGQGVHTAMCQIAAEELGVRVEDVEISRADTDLTTFCLGAFASRLTY
                     VSGNAVKNAASNVKQQLFEQAGEMLEANPEDLMSRDGKIFVKGADGKSVTVADVARAR
                     LFRHNGAPIVGSGSFDADSVLPDSTRFGNESGAYNYGAQAAHVHVDPETGQVKILNYA
                     VASDCGTVIYPIGAEGQVEGGLAQGIGYALTEGLQIDEGRPINPNFSDYRIPSMRDMP
                     PLQHAFADSYEPTGPFGAKGLGELNMDPTAAVINNAIFDAVGVRIKTLPITPEKILRA
                     LREKNKS"
BASE COUNT          691 a         1018 c         1049 g          826 t
ORIGIN      
        1 cgcggcgagt agagaaattc ggaaaaacca tcgggcggcg caaaggtcat gagcggcggt
       61 ggcaggcgtt cgccgacgac gcgcatctct tcggcattgc gcgtgtggac gaacagcatg
      121 tcggcacccg ctctgtgaaa cgcttccgca cgacgcaagg cctcgtcgag gtcgtacact
      181 ctccttgcgt ttgtccgggc gatgatcacg aaatcggggt cggtgcgggc cgcgatcgcc
      241 tcggcgattt tcttgagcat cagctcggtc gggatcagat gatcgacgcc gacgtggtgc
      301 tcgacacggc gaggcagcag ttggtcctcg atctcgatcg cggcgaagcc cgccgcttca
      361 gcgagggcga tcgtgcggtg cacgtgcaca ggatcgcccc agccgccgcc agcatccagg
      421 acaatcggta attgacacac ggcgcgcatg tcgagcgcca ccgcggcgag ctccgggagc
      481 gtcagattag cctcggtgac gcatttcagc caaccgagcg atccgccgct gagataaacc
      541 gccttgaacc cggcctcctc ggcgagccgc gccatgatcg gattgagggc caccggagcg
      601 acgatgagtt cattccccct catgagctcg ctgaactttt gcacgttacc tcctccttaa
      661 gttgatcgcc gcgatgctct tgacccttct tgttcccaat taatttagct cctccatagc
      721 ccggggcgga gaatatgtcc agctcctgtg aaagccagtc cgaagccgat aacgcgacgt
      781 tagtggatat tgtcagggaa gaggggcgtc aggctcgccg gtatctcatt caaggcagcc
      841 gctgaaaggc ctcttgggcg gcgcggcgaa ccagaacttt gaccatctcg cgcttgtatt
      901 ccgcggaacc acgattgtca tccgtgggat cgcattccgt agcggcaact tcgcccattt
      961 tttggagagt ggcatcgtcg atcgatttgc cgcgcaggac ttcttcggct tttttggcgc
     1021 gcacgatagt tgacgcgacg gagttaaggc ctagccgcac atcctcgcag attccgttct
     1081 tggcttgcaa tgtaatcgcg actccgaccg tcgcgaagtc ttcgatgctg cggggggtga
     1141 atttgatatg cgaccagccc ggtctttgcg gtggcgggac atggatctcc gttagcaatt
     1201 cacccggctc cagagcggtt tgataataat cgatgaaaaa ttcgtccaag cgtaaccttc
     1261 gttggccctt gctgctggag agtgtcactt cagcatcgag ggcaatcaaa cttgcaccgg
     1321 gatcggtcaa cggatcgccg ccggcaagat tgccgcccac cgtacccatg ttacggatgc
     1381 gtggctgggc gaccttacga aaagtttcat ggagcagggg atagtgcttc tgtacggcgg
     1441 cgcaaagctc aatgtcacga tgccgcgcac cggcgccgat acggaggccg tggttgctgt
     1501 tgtaagcgat tcggtcgagc tttgggatac gcgccaagct gatcacgacc ttgggcatga
     1561 gcaagcgctg gcgcatcatg atgatcaaag acgtgccgcc cgcgatgacg cgtgcgtctt
     1621 cgccgtgcct ctccatcaaa ctgatggctt ttttgagagt tgtcggctcg tggtaatcaa
     1681 atttgatcat gacttgtttt tttctctgag ggcccgaaga atcttttccg gcgtgatcgg
     1741 taaggtcttg atccgcacgc ctacggcgtc gaagatcgcg ttgttgatca cggcggcggt
     1801 gggatccatg ttgagctcgc ccaatccctt ggcgccgaac ggtcccgtcg gttcgtatga
     1861 atcggcaaag gcatgctgca gcggcggcat atcgcgcatg gacggaatgc ggtaatcgga
     1921 gaaattcggg tttatcggcc ttccttcgtc gatctgtaat ccttccgtaa gggcgtatcc
     1981 aatgccctga gccaacccgc cttcgacttg gccttctgcg ccgatgggat agatgaccgt
     2041 gccgcagtcc gacgcaacgg catagttgag gattttgact tgtcctgttt caggatcgac
     2101 gtgaacgtgg gcggcttggg cgccgtaatt ataggcgccc gactcgttgc caaagcgggt
     2161 gctatcgggc aatacggagt cggcgtcgaa actacccgag ccgacaatcg gtgcgccgtt
     2221 gtgacggaac agtcgcgcgc gcgccacgtc ggcaacagtt acagacttgc cgtccgcgcc
     2281 tttgacgaaa attttaccgt cacgagacat gaggtcctca ggattggctt ccagcatctc
     2341 gcccgcttgc tcgaaaagtt gctgcttcac attggaagcg gcgttcttca ccgcattgcc
     2401 gctcacatag gtaagccggc tggcgaaggc gcctaaacaa aaagtcgtga gatcagtgtc
     2461 tgcgcgggaa atctcgacat cttcgacccg cacgccaagt tcttcggcag cgatttggca
     2521 catagcagtg tgaacaccct ggccgcattc accctcgcca cttaagatta aagccttgcc
     2581 gtcttcattg atttttatcg tggcggagct gccgtcgtaa tcgccgaaat gacgtttgcc
     2641 gctgacatga acagtacacg ccaagcctaa tccggtattc ggccgtctgt tggcgcgctt
     2701 ggctttccag tcgatcattt tatcgaccat gtcgagacac tgcttcagct cgcagctcgt
     2761 gactcggttg ccgtgagggg agacatagcc gacttcagct gcgtttatgc gggcgatctc
     2821 gatggggtcg atgccgagtt cgtgagcacc gagatcgatc gcttgctcga ccgcccattc
     2881 cgccgatgga ttgccgaagc cgcgaaacgc gccggtggga atcttgtttg tataaaccaa
     2941 cagcgcttcc gtcttaacgt ccgaatattt gtagcaagta tcgtggcgca tcgcggcgac
     3001 tccagtaatt gcgggagctt tagctgagta tgcgccattg tcggcgatca ctttgatatg
     3061 cttggcgcgg atacggccat ccttcttgaa acccacctta acgttgattt tcatgaagac
     3121 acgcggtcgg cagccggcga gaaactcctc ttcgcggcta ttgatcagtt ttaccggctt
     3181 gccggctttt tttgcgagga cagctgcaac caaggcgttg ttgtcgtcgc aggatttgcc
     3241 gccgaatccg ccgcccacag cgctttggat gacgcgcaca tccgattccg gcacacctaa
     3301 tgccgcggcg attcgaaggc gcgcgctaaa cagcgtctgc gtgttcatgt agatcgtgta
     3361 tttaccgttg gcgccgtatt ccgcgacgct gccgatggtt tcgatggagc agtgccactg
     3421 tggcatgctc gtaaaggtgt cttcgacgat cacgtcagac tcggcgaacg cttgggcgat
     3481 gttgccgcgc tcgatgttca tggtcatcgc gatattattt ggcttgtcat catgcacgag
     3541 tggtgcgtcg tctttcattg cctcctcggc gtcgaagaca ccgg
//
LOCUS       DATILV010000328         4103 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1867810, whole genome shotgun sequence.
ACCESSION   DATILV010000328 DATILV010000000
VERSION     DATILV010000328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4103)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4103)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4103
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1867810"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(97..336)
                     /locus_tag="VLJ17_07465"
     CDS             complement(97..336)
                     /locus_tag="VLJ17_07465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22853.1"
                     /translation="MSRIARSLGTQDAARGVYDLAGRLGAKGVLCDLGMPQDGIDLAA
                     DLASQSPYPNPRPTARHAIGNLIARAGGGSSPVEP"
     gene            complement(401..1582)
                     /locus_tag="VLJ17_07470"
     CDS             complement(401..1582)
                     /locus_tag="VLJ17_07470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22854.1"
                     /translation="MANEGIIDVLEPIDQPSLHNVTALPKRDTDTIPPEPPSPLTVTT
                     FPTGQAEPSHHQLPSADQEISAVDEGILSQKLSDTELMLAHAAETGKEVNPEVIATLT
                     NAREAHARRAWTKALTEQFWPAYTRLCASIKPVTGESLAACEGNGLANILKRYRTGTL
                     YLVLLILPLSIIMFINTSISNEINDRIKENNALTVTLHDRLIKIQAGTAQTDRDLNTE
                     LQQFATSNRSLYSLASILNWFILRVEQDPLSDGDKRQALQLPVPLTDPASAGFDKIKT
                     YQDIRTYAKDVQQMNLMIYGAITAYLLPILYALLGASAYALRSLSQQIIARTYTPTYA
                     DFARIIIAVIAGLVVGLFNNFTQGISLSPLAVAFLVGYAVEIFFSFLDAFLETLRKVR
                     S"
     gene            2208..3155
                     /locus_tag="VLJ17_07475"
     CDS             2208..3155
                     /locus_tag="VLJ17_07475"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HSV22855.1"
                     /translation="MTGKPDTPIGEAWWPNKQWGADDQAGSTNWFTKPEVVRRGLAEV
                     SEGKVYALGHPYTADMPLFGARKFVLRIPGSPTDGPFGANKLVYNDEFLATEIGQVGT
                     QFDGLGHIGVQIGQDGDKASMRFYNGRSMAEIGSETGLKKNGIEKLHPMVGRGILIDV
                     AGYRGVDAMDVGQEITMADVRGALQRQGMANMQFSPGDVVLFRTGWPRYWITDNAKYN
                     SGEPGIGIEVARWLSDVVMAGGVGSDTWATEVIPNPDPACAFCAVHTHLLVRHGIVNQ
                     ENLDLEALARDRVYRFMYVFTPVPIAGATGSPGSPIAVK"
     gene            complement(3317..3487)
                     /locus_tag="VLJ17_07480"
     CDS             complement(3317..3487)
                     /locus_tag="VLJ17_07480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22856.1"
                     /translation="MRECLSLEIPLIEPEWYLVRYEVEHADEVASGNEKGTRRSLEWS
                     AIIGTTLLGLIL"
     gene            complement(3811..>4103)
                     /locus_tag="VLJ17_07485"
     CDS             complement(3811..>4103)
                     /locus_tag="VLJ17_07485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22857.1"
                     /translation="GGMVNLGGAKLGNVLSSEDSAKYWAKLLGVTAPPQIATLAHKGG
                     PTSVDSMTWVKDGIPVVILYSVQNGGHAMPLEGEDLDSPVVIWDFFSKLPSR"
BASE COUNT          838 a         1141 c         1254 g          870 t
ORIGIN      
        1 acgtctgatc cccgtgcgtt gcttgagaca atgtcaatgg gcctagcgcg tcgagtattt
       61 ggcagcgccg ccctcagccg ctgcgcaacc gtatctttaa ggttcgaccg gcgacgatcc
      121 tcccccggcg cgagcaatca gattgccgat tgcatgtcgc gcagtcggcc tcggattcgg
      181 atagggactc tgggatgcaa ggtctgcggc gagatcgata ccgtcctgcg gcataccgag
      241 atcgcacagc acgcccttgg cacccagccg accggcgagg tcgtatacgc cccgcgcggc
      301 gtcttgtgtt ccaagtgagc gtgcaatgcg cgacatcgca tccggtgcag cggcgcaact
      361 gttgcgccgg agtcttgcca cgttaccgtg gcatcaaacc tcaactacga acctttctca
      421 gggtctccag aaatgcgtcg aggaacgaga agaaaatttc cactgcgtag cctacgagga
      481 atgcgaccgc gagaggtgat agtgaaatcc cttgagtgaa attgttaaac agaccgacta
      541 ccagaccggc gatcacggcg atgatgatac gagcgaaatc ggcgtaggta ggggtatagg
      601 tcctcgctat gatttgctgc gataacgatc gcagagcgta agcgctggcg ccgagcaaag
      661 cataaaggat cggcaggaga tacgccgtga tcgctccata aatcatgagg ttcatctgct
      721 gcacgtcttt ggcgtaagtt ctgatgtctt gatacgtttt tatcttgtcg aaaccagcgc
      781 tcgccggatc ggtaagcgga acgggcagtt gaagtgcttg ccgtttatcc ccatcagaaa
      841 gaggatcctg ctcgacacga agtatgaacc agttcagtat cgaagcaaga gaatacaagg
      901 agcgatttga cgtcgcgaat tgttgtaatt cggtgttaag atctctatca gtctgagcgg
      961 tcccggcttg gatttttatc aagcggtcat gcagggttac cgtcaaagca ttgttctctt
     1021 tgatgcgatc attgatttca tttgaaatag aggtattgat gaacatgata atcgacaaag
     1081 gaaggatcaa gagaacgaga tagagcgtgc cagttcggta ccgtttgagg atgtttgcaa
     1141 gcccattacc ttcgcaggcg gctaaactct ccccagtaac gggcttgatg gaagcacaca
     1201 atcgggtgta ggcgggccaa aattgttcgg tgagtgcttt ggtccacgcg cgacgggcgt
     1261 gcgcttcgcg agcatttgta agcgtggcga tgacttccgg gttgacttcc tttccggttt
     1321 ccgcggcatg agccagcatc agctcggtgt cagaaagctt ctgtgacaaa atgccttcgt
     1381 caacggcaga gatttcctgg tcagcagatg gcaactgatg gtggctcggc tcagcttggc
     1441 cagttggaaa tgtcgtcacc gtcaatgggg agggcggctc gggcgggatg gtgtccgtgt
     1501 cccgtttggg aagagccgtg acgttgtgca atgagggctg atcgatcggt tctaaaacat
     1561 caattatgcc ttcgttggcc atcgcttgat cccgtctaat cagtattgcg ctagaaattt
     1621 gattgtttgt agttttgaag gtgattgtat gcgcgtttta tcacctccaa tgtgaggtgg
     1681 gtcacatctg gcaaagttca tctttgttat gtgatctttg gagcaacgtg gtagcggcta
     1741 tttcaaactg cggcgcatga tatctaatgg aagattgcac tggcggtttg ccgatttcac
     1801 tcgacaggat accgttgacg gccggtcgat attgtccaag ttgtcagtag tagacccagc
     1861 cggtatcact cgctcggcag gcaagcgagg taatcaccat tttatggagg tttcttgcgc
     1921 tttccgcccc gtcccgtagc gagcgccagg tctccaggaa actcggtcgg ttcgctttcg
     1981 atcatcagtc gtcgcgtttg cgcttgacgc cggatatcgc gctcctacgc tttcccagcg
     2041 gggcgaatga acccaagaag tcgttgcaag cagaggagga aaccatgtcg acatgtcgga
     2101 cgtctgcaat cccggtcgcg gccatgctcg ctacgctgct catcggcggc gcggcccaag
     2161 cggcctgcga tgagaccaat tggaaggact gcgccgggaa gccctggatg actggcaagc
     2221 ccgacacgcc gattggcgag gcctggtggc cgaacaagca atggggtgcc gacgaccagg
     2281 ccggctcgac caactggttc accaagcccg aggtggtgcg gcgcggcctc gccgaggtct
     2341 ccgagggcaa ggtctacgcg ctcggccatc cctacacggc cgacatgccg cttttcgggg
     2401 cgcgcaagtt cgtgctgcgc atcccgggtt caccgaccga cggcccgttt ggcgccaaca
     2461 agttggtcta caacgacgag ttcctcgcca ccgagatcgg ccaagtcggc acgcagtttg
     2521 atgggcttgg ccatatcggc gtccagattg gccaagacgg cgacaaggct agcatgcgct
     2581 tctacaatgg ccgctcaatg gccgagatcg gcagcgagac tggcttgaag aagaacggga
     2641 tcgagaaact gcatccgatg gtggggcgcg gtattttgat cgatgtcgcc ggctatcgcg
     2701 gggttgacgc catggatgtc ggccaggaga tcaccatggc ggacgtgcgc ggcgcgctgc
     2761 agcgtcaggg catggccaac atgcagttca gtccaggcga cgtcgtactg ttccgcaccg
     2821 gctggcccag gtactggatc acggacaacg cgaaatacaa cagcggcgag ccgggcattg
     2881 gcatcgaagt ggcgcgttgg ctgtccgacg tggtgatggc cggcggcgtc ggctcggaca
     2941 cctgggcgac cgaagtgatc ccgaaccccg acccggcctg cgcgttctgc gcggtgcaca
     3001 cgcacctgct tgttcgccac ggcatcgtca atcaggagaa cctcgatctc gaggcgctgg
     3061 cgcgagaccg ggtttaccgc ttcatgtatg tcttcacgcc ggtgccgatc gctggcgcca
     3121 ccggctcgcc gggctcgccg atcgcggtca aatgatgggt gcggccatca gcccatcagg
     3181 agcgggctgc agcctgttga gcggctgcgc cggtcgggca acccggagga gcctggcgaa
     3241 ccgggcggtg ctgggggtct cgaccggctg tgcgcggacg atccggctgg ccgccgccgt
     3301 tcaatcgccg ttctgctcac agaatgagcc caagtagtgt ggtgccgatg atcgccgacc
     3361 attctagaga ccgccgcgtg cccttttcat tgccgcttgc aacttcgtcg gcatgttcaa
     3421 cctcgtaacg tacgagatac cactccggct cgatcagtgg gatctccaac gaaagacact
     3481 cgcgcatgcg ggcttggcgc tccaagcagc tcgagattcc acttaatcta gcacctcgca
     3541 cctcgtcaca ctggattatg acatgttgaa tccgaggtca cagtagttcc ggtaggagtg
     3601 tcggatcgac gaggacttcg atactgcggc gattcctggc ggtgcatcat tcgattgaac
     3661 agggtgtgac gtgttcgcgg cggggacggt caggtgccaa gcgtaatgct gctgagcgac
     3721 gctaccggcg cacccaactg cgcagggtca gcgcaccgag cacggccgca cgaccgaatg
     3781 gaagatgggt gtccttgcga tcgcgggacg tcagcggctc ggcaatttgg agaagaaatc
     3841 ccagatcacg acgggcgaat ccaagtcctc gccttcaagc ggcatggcgt gcccgccgtt
     3901 ctgcaccgaa tacaaaatga ccacggggat accgtctttc acccaggtca tgctgtcgac
     3961 cgaggtaggg ccgcctttat gcgccagcgt cgcaatctgc ggcggggccg taacgcccaa
     4021 cagctttgcc caatatttcg cgctgtcttc gctagagagc acgttgccga gctttgcgcc
     4081 gcccaaattc accatgccgc cgc
//
LOCUS       DATILV010000329         2815 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4164880, whole genome shotgun sequence.
ACCESSION   DATILV010000329 DATILV010000000
VERSION     DATILV010000329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2815)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2815)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2815
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4164880"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..337
                     /locus_tag="VLJ17_07490"
     CDS             <1..337
                     /locus_tag="VLJ17_07490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010687284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV22858.1"
                     /translation="QEDNRRIVRDLLTSAGFDLIEATTGEEGVRLAETHRPDLILMDI
                     QMPVLDGYEATRRIKATAELRHIPIIVVTSYALSGDSDKALAAGCDAYVTKPYSPRQL
                     LAKINEYLK"
     gene            356..1471
                     /locus_tag="VLJ17_07495"
     CDS             356..1471
                     /locus_tag="VLJ17_07495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020175647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV22859.1"
                     /translation="MHKPPRILVVDDNETNRDILVTRLETHGYELLQAGDGEEALAAA
                     KQHLPDLILLDVMMPKIDGIEVTRRIKADAAMPFMPIILVTAKADSKDVVVGLDAGAD
                     EYLTKPVDQMSLVARVKSVLRIKELHDTVTAQAADLASWNTTLEQRVTDQIKEIERVG
                     RLKRFLAPQVAELILSSGDEKVLESHRRDISVVFCDLRGFTSFAEGAEPEDVMSVLNE
                     YHACLGSLIHKHEGTLDKYAGDGLMVLFNDPLPCPDPPVRAVRMAVEMRDEVGKLAVK
                     WRKYGHELGFGLGISHGFATMGRIGFEGRFDYSAIGSVVNLAARLCGEANAGQILIDR
                     KVYMAIEELADVEQVGELNLKGFHRPVVAYDIRALRS"
     gene            complement(1498..2427)
                     /locus_tag="VLJ17_07500"
     CDS             complement(1498..2427)
                     /locus_tag="VLJ17_07500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HSV22860.1"
                     /translation="MTETLLPKLAEPKQVLTGVSPAADHSEGMSYLQSVPRRLVTLYL
                     PLSIIVIILLFPFYWMGLTAIKPDEQLLDLDKFNPFWTWNPTFKHIYKLLFETYYPLW
                     LWNTMLVAVSATILSIVASVLAAYAIVRLRYKGAQWVGGAIFLAYLVPPSILFIPLAS
                     VVFQYGLFDTPFALILTYPTILIPFSTWLLMGYFKTIPYELEECALIDGASRWQILTK
                     IVLPLAIPGLISSFIFCFTLCWNEFIYALTFLSSTQNKTVPVAIVNEFVDGDIYRWGS
                     LMAGALVGSLPLVILYAFFVEHYVSAMTGAVKE"
     gene            complement(2420..2803)
                     /locus_tag="VLJ17_07505"
                     /pseudo
     CDS             complement(2420..2803)
                     /locus_tag="VLJ17_07505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159010.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
BASE COUNT          677 a          775 c          817 g          546 t
ORIGIN      
        1 ccaggaagac aaccgcagga tcgtgcgcga cctgctgacg agcgcaggat tcgacttgat
       61 cgaggcgacg accggcgagg agggcgtccg cttggccgag acccatcgcc ccgatctcat
      121 cctaatggac atccagatgc ccgtgctcga cggctatgag gcgacgcgtc ggatcaaggc
      181 cacggccgag ctccggcaca tcccgatcat cgtggtcacg tcctatgcgc tgagcggcga
      241 ctcggacaag gcgctcgcgg ccggatgcga cgcctatgtc accaaaccat acagtccgcg
      301 ccaattgctg gcgaagatca acgaatatct aaaatagagt cggaatactt cccgcatgca
      361 caagccgcca cgcattttgg tcgtcgatga caatgagacc aaccgcgata ttcttgtcac
      421 gcgtctcgaa acccatggat atgaattgtt gcaggcaggt gacggcgagg aagcgcttgc
      481 cgccgccaaa cagcatttgc cggacctgat cctgctcgat gtgatgatgc cgaaaatcga
      541 cggcattgaa gtcacccgcc gtatcaaggc ggacgccgcc atgcctttta tgccgattat
      601 cctggtgacc gccaaagccg acagcaagga tgttgtcgtg ggcctcgatg ccggcgcgga
      661 tgaatatttg accaagccgg tcgatcagat gtcgcttgtc gcccgcgtca aatcggtgct
      721 gcgcatcaag gaattgcacg acacagtcac tgcacaggca gcagacctcg catcttggaa
      781 cacgacgctt gagcagcgtg tcacagatca aatcaaggag atcgaacgcg tcggccgatt
      841 aaaaaggttt ctggcacctc aagtggcgga gcttattctt tcttcgggcg acgaaaaagt
      901 attggaaagc catcgccgcg atatcagcgt tgtattttgc gatttgcgcg gcttcacatc
      961 ctttgcggaa ggtgccgagc ctgaggacgt gatgagcgtc ttgaatgaat accatgcgtg
     1021 cctcgggtcg ctcatccaca aacatgaggg cacgctcgac aagtatgccg gcgacggcct
     1081 catggttctt ttcaatgacc cactgccatg cccggaccct cctgttcgcg ctgttcgcat
     1141 ggcagtggaa atgcgggacg aggtgggaaa gctcgcggtg aagtggcgca aatacgggca
     1201 cgagctcggc tttggtctcg gtatctctca cggctttgcc accatgggac gaatcggatt
     1261 cgaaggcagg ttcgattatt ccgctatcgg ttccgtcgtg aacttagctg cgcgattgtg
     1321 cggagaagcg aacgccggac agattttaat cgaccgtaag gtctacatgg cgatcgaaga
     1381 gctagccgat gtcgaacagg ttggagagct caatctcaaa ggttttcatc gtcccgtcgt
     1441 cgcttacgac attcgagcct tgcgttcata aagcggccct tcattattct ttattcttta
     1501 ttcttttacc gcccccgtca tcgccgaaac atagtgctcg acgaagaaag catacaagat
     1561 caccagcggc agcgatccaa ctagcgcgcc ggccatcaat gagccccagc gataaatgtc
     1621 gccgtcgacg aattcattca cgatggcaac cggaacggtt ttattttgcg tcgaggacag
     1681 gaatgtcagc gcgtaaatga attcgttcca acaaagcgta aagcagaaga taaaggatga
     1741 gatcagcccg ggtattgcca gcggcaacac gatcttggtc aagatttgcc agcggctggc
     1801 gccgtcgatc agcgcgcatt cctcaagttc gtatgggatg gtcttgaaat agcccatcag
     1861 cagccaggtc gagaatggga taagaatggt cggataagtg aggatcaacg caaacggcgt
     1921 gtcgaacaag ccgtactgga acacgaccga tgccagcggt atgaacagga tcgagggcgg
     1981 caccagatag gccagaaaga tcgcaccccc gacccactgt gcgcccttgt agcggagccg
     2041 aacaatagcg taggcggcca gaacactggc aacgatcgaa agaatagttg cggaaaccgc
     2101 cacgagcatc gtgttccaca gccagagcgg ataataggtt tcgaacaaaa gcttgtagat
     2161 gtgcttgaag gtcggattcc aggtccagaa cggattgaac ttgtcgagat cgagcagttg
     2221 ctcgtccggt ttgatcgcgg tcagccccat ccagtagaac ggaaacagca ggatgatgac
     2281 gataatcgac agcggcagat acagcgtgac cagccggcgc ggcaccgact gcagataact
     2341 catgccctcg ctgtgatcgg cggctggcga tacaccggtc agcacctgct tcggctcggc
     2401 cagtttggga agcagcgtct cagtcattgc tctccccctg ctgccatttg cggcgctgca
     2461 gtccgaacca ggaaatcagg atggcggcga gcaggaacgg aatcatggcg gtggagatcg
     2521 cagcaccctc gccgagctga ccgcccagga tcgcgcgctg ataggacagc gtcgccatga
     2581 gctgggtggc gttgaccggg ccaccgcggg taagcaccca gatcagctgg aagtcagtaa
     2641 aggtgaaaag aaccgaaaac gtcatcacca ccgcaataat aggcgtcagc agcggataag
     2701 tgacgtagcg gaaaatctgc cagcggctgg cgccgtcgat ggtcgcagct tcatagagcg
     2761 atggcgaaac ggtctgcagc ccggccagca gcgtgatggc gacgctgtcc tatca
//
LOCUS       DATILV010000330         2398 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_847104, whole genome shotgun sequence.
ACCESSION   DATILV010000330 DATILV010000000
VERSION     DATILV010000330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2398)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2398
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_847104"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..547)
                     /gene="maiA"
                     /locus_tag="VLJ17_07510"
     CDS             complement(<1..547)
                     /gene="maiA"
                     /locus_tag="VLJ17_07510"
                     /EC_number="5.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016034 - maleylacetoacetate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maleylacetoacetate isomerase"
                     /protein_id="HSV22861.1"
                     /translation="MKLYSYFRSSAAYRTRIALHLKGLEFETVSIHLTSDGGRQHAPE
                     FHAVNPQKRVPVLALNNGEVLLQSLAIMEYLDEVYPDPPLLPKDPIERARVRAVAQII
                     ACDIHPLNNVGPLNYLRNTLKADQSAIQEWYRHWIVTGFEAIEELIRPGPYAFGRNVT
                     VADICIVPQVANARRYKVPLER"
     gene            complement(544..1068)
                     /locus_tag="VLJ17_07515"
     CDS             complement(544..1068)
                     /locus_tag="VLJ17_07515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012452967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HSV22862.1"
                     /translation="MNGNTAKDQVRGPADPHVAPLKLEEFLPYRLNVVASLVSQALSR
                     IYVDRYGIGIPEWRILVTLGQFEVMTAKAIGAHSHMHKTKVSRAVSALERRKLVVRRE
                     NRADRREALLSLTPAGRTIYRDLAPGALEFARRLFETIDPADRAAFERAVDRLTEQSR
                     TSSFATVTNAQEET"
     gene            complement(1206..1511)
                     /locus_tag="VLJ17_07520"
     CDS             complement(1206..1511)
                     /locus_tag="VLJ17_07520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22863.1"
                     /translation="MRIFIAPALVVLLALTAPASAETKIFIVENHPDGYGVDQCLASG
                     ANCGKPVASAYCQSRKYGQAVSFRKVEPEEITDGSLAGDGTCRTRSCIDFVAIECQR"
     gene            2130..>2398
                     /locus_tag="VLJ17_07525"
     CDS             2130..>2398
                     /locus_tag="VLJ17_07525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HSV22864.1"
                     /translation="MELRLYDTLTREKWVFTPIDPQRVRMYVCGPTVYDFAHIGNARP
                     VIVFDVLFRLLRHLAKQGVWDGGKGETTVTYVRNITDVDDKINARA"
BASE COUNT          460 a          696 c          749 g          493 t
ORIGIN      
        1 agcgctcaag cggcaccttg tagcgccggg cgttggcgac ctgcggcacg atacagatgt
       61 ccgcgaccgt cacgttgcgc ccaaacgcat agggcccggg cctgatcaac tcctcgatcg
      121 cttcgaagcc ggtgacgatc cagtgccggt accattcctg gatcgcgctc tggtcggcct
      181 tgagggtgtt gcgcaagtaa ttgagcgggc cgacattgtt gagcgggtgg atgtcgcagg
      241 cgatgatctg cgccaccgcc cgcacccgcg cccgttcgat cgggtccttt ggcagcagcg
      301 gcgggtcggg gtagacctcg tcgagatatt ccatgatggc gagcgactgc agcagcactt
      361 cgccgttgtt caacgcgagt accggcaccc gcttttgcgg gttcacggca tggaattccg
      421 gcgcatgctg ccggccgcca tcgctggtca ggtgaatcga cacggtctcg aactcaaggc
      481 ccttgaggtg gagggcgatg cgcgttcggt atgcggcgga tgagcggaaa taggagtaga
      541 gtttcacgtt tcctcctggg cgttcgtcac agtcgcgaac gacgatgttc tggattgttc
      601 ggtcaggcgg tcgacggcgc gctcgaacgc cgctcggtcg gcgggatcga tcgtttcaaa
      661 caggcgcctc gcgaattcga gagcgccggg cgctagatcg cgatagatcg tgcgcccggc
      721 cggtgttagc gacaggagcg cttcccgtcg gtcggcacgg ttctcgcgcc ggaccaccag
      781 cttgcgccgc tccagcgcgc tcaccgcgcg cgagactttg gtcttgtgca tatggctgtg
      841 ggcgccaatc gccttggcgg tcatgacctc aaactgtccg agggtgacca gaatgcgcca
      901 ttcgggtatg ccgatgccgt agcgatccac ataaatgcgc gataatgcct gagacaccag
      961 gctcgccacc acgttgaggc gatagggcag gaactcctca agctttagcg gcgccacatg
     1021 cgggtcggct ggcccgcgca cttgatcctt ggccgtgttg ccattcattg tcgcctaccg
     1081 tttgtccagg gggcgcaagg atggcggaag tcgcagtgcg gcgcaatgga atcagatgac
     1141 agagatcaga tgtcggaggt cagatgcaag tggtggcttt ctgacatcca acatctgtca
     1201 tttgttcacc gctggcactc gatagcgacg aagtcgatgc aactgcgcgt gcggcaggtc
     1261 ccatctccgg ccaagctgcc atcagtgatc tcctccggct ctactttgcg gaacgaaacg
     1321 gcttggccgt atttgcgcga ctggcaataa gcactcgcca ccggcttgcc gcaattcgct
     1381 ccgctcgcca agcattgatc gacgccatag ccgtcgggat gattttccac gataaagatt
     1441 tttgtctccg cactggccgg agccgtcaaa gccagaagga caaccaatgc tggggcgatg
     1501 aatatacgca tggcaaatcc ggatctaaaa ggtgaagcgg gaaggctgtt ttgactcaat
     1561 tttgtaaatg cggccttaac cgcaaggaca tgggactttc ctccccgtcc ctcgcggagg
     1621 gggcgactta agcgaggtcg gattcacggg cacggccgtg cggtgcagag agccccagcc
     1681 ctccccgaag atggggagcg agaagagagg tgcttgccag attcggccca cgaatgctac
     1741 gtaattttac ctatgctctt gacgatgacg ccgggtgtga tcattgtgca tcaccatgaa
     1801 cggccttttg acaatttgcg gcatttgccg ggagattact ggctagcatt acgctggctg
     1861 aggccgtctt ttctcgcccc gagatgaatg gacgccccgg ccgacgggag gccggtgtct
     1921 tccccgcatc agaaccttga tgtagctcgg acgggcactc gatggacact taggaagttt
     1981 tcaccgtcat gctcgcgctt gtcgcggggc atccacgcct ttcttgccga gtttgagtga
     2041 gcaagacgtg gatggctggg acaaggtcgg ccatgactcc gaagaaacgc tcaatgttcg
     2101 accagcgggc cattggcgga ttggtggcga tggaactgag actttacgat accctcaccc
     2161 gcgaaaagtg ggtgttcaca ccgatcgacc cacagcgtgt gcgcatgtat gtgtgcggcc
     2221 ccacggtcta cgacttcgcg catatcggca acgcccggcc tgtgatcgtg ttcgacgtcc
     2281 tgttccgcct gttgcgccat ctcgcaaagc agggcgtatg ggatggcggc aaaggcgaga
     2341 ccactgtcac ctatgtgcgc aacatcaccg acgtggacga caagatcaac gcgcgcgc
//
LOCUS       DATILV010000331         2157 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4931841, whole genome shotgun sequence.
ACCESSION   DATILV010000331 DATILV010000000
VERSION     DATILV010000331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2157)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2157)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2157
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4931841"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(506..814)
                     /locus_tag="VLJ17_07530"
     CDS             complement(506..814)
                     /locus_tag="VLJ17_07530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22865.1"
                     /translation="MPTRLAPARLRAGEKEEPLLAQEKRVLAAPREQALAAREALVAP
                     VVERERARVAQQKLSQAARLWRADPPARSTVRHPRLAGQMVSKAAMSQTDRRQHAIPA
                     "
     gene            856..1986
                     /locus_tag="VLJ17_07535"
                     /pseudo
     CDS             856..1986
                     /locus_tag="VLJ17_07535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020120.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
BASE COUNT          447 a          626 c          627 g          457 t
ORIGIN      
        1 tgttcgcttt taggggcgtc atagatagct ggcaactcgt agcgagttca acattttgcc
       61 acaacggtat tcggctgcct ttggtacgcc tcgaattgtc gtaacttttt taaaagtctc
      121 ttgtggggcg gtcggggtgc ctcagcacca cgtatcagga tttatggtca gtctaagagg
      181 acgaataagt cccatcggcg accagaacgc ggggaggtaa agatgggtgc tccaatttcc
      241 gacgacgaat tcgagaagta tgcgcctaaa caatttcgtg agcagccgcg tatgcctgct
      301 gcccagcaac ttcatgtagc gccgatggtc cgctcgtcga cagatacgca tcaggaacga
      361 cggacgatag acgaagtcga ttcctggccg gaacgtatcc cggagccgcc accaccacga
      421 tcagacccta ggacatcatc cgtgttcgcc cgattttcat cgttattcat attcgcgggt
      481 gtcctcgcgc tgggaattat ttttttcaag ccggtattgc atgttgtcgg cggtctgttt
      541 gagacatcgc agccttcgaa accatctgac cggccagccg cggatgccgc accgtcgaac
      601 gggcgggcgg atcggctcgc cacaaacgcg ccgcttgcga cagcttctgt tgcgcgaccc
      661 gcgcccgctc tcgttccaca accggcgcca ccagcgcctc tcgcgcagcc agcgcctgct
      721 cccgtggcgc agccagcaca cgcttctcct gggccagcag cggctcctcc ttctcccccg
      781 cccgcaaacg cgcaggcgca agtcgcgtcg gcaccgcaac cgttccagca ggaagcgggt
      841 agcaggactc tctttcgcgg tgtaaccgat actgaaattc ggtttgggat ttccgcagca
      901 ctcagtggtc cgaccaagga actcggccag aatatgaagt tgggcattat ggctgcgttc
      961 aacgcaacca atgccaacgg tggcgttttt ggccggcagc tccaactcat cgcggcagac
     1021 gacggctacg agccggctcg agccgctgtg accatgaagc agctttatga gaacgacaag
     1081 gtttttggag tggtcggcaa cgtggggaca cccacggcgg tggttgcatt gccttacgcc
     1141 ctggagcgca agatgctgtt tttcggggca ttcaccggcg ccggcctgct caggaacgat
     1201 ccccccgacc gctatgtctt caactaccgc gccagctatg ctgaagagac tgaagccacg
     1261 gtctactatc tggtgaaggt caggcgcctg aagaccagtc agatcgctgt ctttgcccaa
     1321 caggacgcct acggcgactc gggcttcgcc ggcgtggcca aagccatccg gtcgctcgga
     1381 ggcaacgacc gtgcaatttt gcggctcaat tatcagcgca acacggtgga cgtggacgat
     1441 gccattgcgc agcttcaggc tcacaacacg aacaagagcc gcgtcccaat caaagcggtg
     1501 attatggtcc ccgcctatag ggccgcggct aaattcatcg aaaagacccg cgatctgtat
     1561 ccggacatga tctatacgag cgtttcgttc gtgggcagca ccgcgctggc caacgagttg
     1621 atgctgcttg gcaaaaggtt tgcaaacggg gtgatcgtca cccaggtcgt gccggcggtt
     1681 gatggacatt catcattggc gctcgaatac aaatctgcgc tcgccaagta ctttccggga
     1741 gaggcaccgg actacgtatc gttcgaaggt tatgtggcgg ccagcgtgtt gatcgcggcg
     1801 ttgaaacgga atggcgctca gctcgatacc gaacggctgg taacgactct tgaaaatcta
     1861 cgcggtcttg acattgggct cggtacgcca gtgaccttca gcccatccga gcaccagggc
     1921 gtgcataagg tgtggggtac acagcttgat gaagcggggc gctatcgacc aatcgacctg
     1981 cagtagcggc gacattgatt tggctaccga tgtccgcttt gggtccgtcg caaagaaaag
     2041 cctcggggct gcctaaggct aaatttcgat aaagtgcgaa tggcagattc aggagtttgt
     2101 ttgcgtcgct gcggtcggtg cgcgccgtca gatcggcttg tatcctacgc caacggc
//
LOCUS       DATILV010000332         6296 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_847243, whole genome shotgun sequence.
ACCESSION   DATILV010000332 DATILV010000000
VERSION     DATILV010000332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6296
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_847243"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            188..802
                     /locus_tag="VLJ17_07540"
     CDS             188..802
                     /locus_tag="VLJ17_07540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22866.1"
                     /translation="MPRARLAYEKPSRVSQGLVVGFSIAVVLMAGWFVTMVMFSEGTN
                     TKAAVEADVSPMTITRAYVTDVLSEPIKPSAIARANRVDLEPTPLGSSLDSAAPIATP
                     PPPRSPLPLASLTEFSPGAPRPALTTSPIAIAIPETSYRGILADELSRQVEAAIDAVD
                     ADVIQLPLPRPRPNIPVPRPRPHIDGGDGQSSANLFDFLTNGPR"
     gene            complement(828..2051)
                     /locus_tag="VLJ17_07545"
     CDS             complement(828..2051)
                     /locus_tag="VLJ17_07545"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: protein motif:HMM:NF005600.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase"
                     /protein_id="HSV22867.1"
                     /translation="MTIKLADIEAARRKLASAVLRTPMLPAPKLSGLTGADVFVKYEN
                     LQVTNSFKDRGAFVKLAALTDDERRRGVICMSAGNHAQAVAYHARRQNIPATIVMPVT
                     TPFVKVKSTEAYGAKVVLEGETLSECQDRVATIVAERHMVLVHPYDDPTIIAGQGTIA
                     LEMLDEVPDLDVLVIPIGGGGLIAGNAIAARGKRETIEIIGVEAALYPSMRNAVTGAN
                     DPVGGPTLAEGIAVKNVGRLTLPVVRALVSDIILVDEVHVERAVNAYLTLQKTMAEGA
                     GAAGLAAMLAAPDRFRGRKVGLILCGGNIDPRMLAGIMVRELEREDRIVSFRLTIADR
                     PGVLGPIATLFGELGANILEVDHRRLFLDVPAKGASLDVTVEARDRDHANQIMSALRR
                     GGYQPVRLAAEAATD"
     gene            2305..2841
                     /locus_tag="VLJ17_07550"
     CDS             2305..2841
                     /locus_tag="VLJ17_07550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HSV22868.1"
                     /translation="MDDGGPRRIGINVDIRPHAFDPFSNPEFFEGVLPRRIIAFLIDL
                     IIITAPIILVCIFIFLFGLVTFGLGWALFFPIMPGSVIWALVYCGITMGGPASATIGM
                     RTVDIEVRTWYGTPCYFVLGAVHAILFWVSTSMLTPLVLLVGLFNERRRLLHDFLLGT
                     VVINNEYRAEMLRHYGRQ"
     gene            2979..3725
                     /locus_tag="VLJ17_07555"
     CDS             2979..3725
                     /locus_tag="VLJ17_07555"
                     /EC_number="2.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004057 - arginyl-tRNA--protein
                     transferase activity [Evidence IEA];
                     GO_process: GO:0016598 - protein arginylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginyltransferase"
                     /protein_id="HSV22869.1"
                     /translation="MTQHSRDTPQFYLTAPSPCPYLPGQEERKVFTHLVGDRAAELNN
                     LLTHGGFRRSQSIAYRPACERCRACVSVRVIADEFRPTRNMRRVLDRNYDLAGEMRIA
                     VPTAEQYSVFRAYLDARHYDGGMADMTVLDYAMMIEDSHVQTSLIEYRRRAGASISDA
                     HKGELLAVALTDVLKDGLSMVYSFYEPAPEHRSLGTFMILDHIARARRMGLAYVYLGY
                     WVRGSRKMDYKGRFLPQERLAPEGWMRIER"
     gene            complement(4398..6296)
                     /gene="parC"
                     /locus_tag="VLJ17_07560"
                     /pseudo
     CDS             complement(4398..6296)
                     /gene="parC"
                     /locus_tag="VLJ17_07560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008129839.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0009340 - DNA topoisomerase IV complex
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
BASE COUNT         1212 a         1976 c         1819 g         1289 t
ORIGIN      
        1 cccggcggcc tgccccgata tcatagtcgg cttaatgttg cttgatcatc tgttgcaagt
       61 ctgcttatct gtagttgcat tttctgctgc gtacatccgt gacatttgca actgcttctg
      121 ctgctatacc gactattgtt ccttttggcc gcgtgcggcg gcacaaccat attggagctt
      181 cgaccccatg ccgagagcac gcctcgccta tgaaaaaccc tcgcgggtat cgcaagggct
      241 agtcgtcggc tttagcatcg cggtcgtcct catggcaggc tggtttgtca cgatggtcat
      301 gttctccgaa ggcaccaaca ccaaggcggc cgtcgaagcg gacgtctcac cgatgacgat
      361 tacacgcgcc tatgtgaccg atgtgttgtc cgagccgatc aagcctagcg cgatagcgcg
      421 agcaaatcgg gtcgatttgg aaccgacgcc cttgggttct tcgctcgatt ccgcagcgcc
      481 gatcgccacg cctcctccgc ctcgatcacc gcttccgttg gcatcgctta ccgagttctc
      541 ccccggtgcg ccacgtcccg cactcaccac gtcgcccatc gcgattgcaa taccggagac
      601 gagttatcgc ggcattctag ccgatgaact ctcccgccag gtcgaagccg ccatcgacgc
      661 cgtggacgcg gacgtcattc agttgccctt gccgcgaccg cgcccgaaca tcccggtgcc
      721 gcgcccgcgg ccgcatattg acggaggcga cgggcagtcc agcgccaacc ttttcgactt
      781 cctgacaaac ggcccgcggt gaccgtcctc ggcccgcaca gattgactca atcggtcgct
      841 gcttcagcag cgagccgcac cggctgatag ccgccgcgcc ggagcgcgct catgatctgg
      901 ttggcgtgat cgcggtcgcg agcctcgacg gtaacgtcga ggctcgcgcc cttggccgga
      961 acgtcgagaa acaggcggcg atgatcgacc tccaaaatat tggcaccgag ctcgccaaat
     1021 agcgtagcaa tcgggccaag cacgccaggc cggtccgcaa tggtgaggcg aaacgagacg
     1081 atgcggtcct cgcgctcaag ttcacgcacc atgatgccgg caagcatgcg cggatcgatg
     1141 ttgcctccac acaggatcag cccgaccttg cggccgcgga agcgatcggg agcggcgagc
     1201 atggcggcga ggcccgcggc ccccgccccc tccgccatgg tcttctggag cgtgagatag
     1261 gcgttcacgg cgcgctcgac atgcacctcg tcaaccaaaa tgatgtcgct caccagcgca
     1321 cgcaccaccg gcagcgtaag cctgccgaca ttcttgaccg caatgccttc tgccagcgtc
     1381 ggcccgccga ccggatcatt ggcccccgta acggcattgc gcatggacgg ataaagcgct
     1441 gcttccactc cgatgatctc gatcgtttcg cgcttgcctc gcgccgcaat ggcgttgccg
     1501 gcgatcagcc cgccaccgcc gataggaatt accaacacgt cgagatcggg aacctcgtcg
     1561 agcatttcga gcgcgatagt gccttgcccc gcaatgatgg tgggatcgtc atacggatgc
     1621 accagaacca tgtgccgctc ggcaacaatg gtggcgacgc ggtcctggca ttcgctcaag
     1681 gtctcgcctt cgagcaccac tttggcgcca taagcctcgg tcgacttgac cttcacaaag
     1741 ggggttgtca ccggcattac aatggtagcc ggaatgtttt ggcgccgcgc atgataggcg
     1801 actgcctgag catggttacc ggccgacata cagatcacgc cacgccggcg ctcgtcgtca
     1861 gtaagcgcgg cgagcttgac gaaggcgccg cgatccttga acgaattagt gacctgcagg
     1921 ttctcgtatt tgacaaagac gtcggcccca gtgaggcccg aaagcttcgg cgcgggcagc
     1981 atcggggtac gcaggaccgc gctcgccagc ttgcgccgtg ccgcctcaat atcggcgagc
     2041 tttatcgtca tggcgatatc ttccgtatcg attcgaacaa cactcttccg gagccggacc
     2101 atggccgagc acgctgcaga gcgcaatgcg aaccaacgtt cgacggatcc ggaccagtgg
     2161 cgtgtagaac ctatccccac aaccgacagg accaagaccg aggtggccag ttttgcggag
     2221 actttgcgcc ggtaccttca cgatattctg ggtacccttg cggcggatgg agcgacgcac
     2281 cattctcggt ccgaggaggc acacatggat gacggtggac ccaggcggat cggtatcaat
     2341 gtggacatca gaccgcatgc ttttgatcct ttttcaaacc cggagttttt tgagggcgtg
     2401 ctgccgcgac gaatcatcgc cttcctcatc gatctcatca tcatcaccgc cccgattatc
     2461 ctcgtctgta ttttcatctt cctgtttgga ttggtcactt tcggcctcgg ctgggcgctg
     2521 ttcttcccaa tcatgccggg atccgtgatc tgggcgctgg tctactgtgg catcaccatg
     2581 ggaggcccgg cgtctgccac catcggcatg cgcacggtcg acatcgaggt gcgcacctgg
     2641 tacggcacgc catgctattt cgtgcttggc gcggtccacg ccatcttgtt ttgggtgtcg
     2701 acctcgatgc taacgccgtt ggtgctgctg gtcggccttt ttaacgaaag gcggcggctt
     2761 ttgcacgact tcctgctcgg cacagtggtc atcaacaacg aatatcgcgc cgaaatgctg
     2821 cgtcactacg ggcgccagtg aaccgcaaat ggctttgacg tgggaccata atcgcgcaaa
     2881 tctatgcgat cggcgggtga cgccaagcgc cgcccgatcc cggcggacag cagccgacac
     2941 acggagcctt tttgaacgca cactgacgaa accgagcctt gacccagcat tcccgcgata
     3001 cgccgcagtt ctacctgacc gcgccctcgc cttgcccata tttaccgggg caggaagaac
     3061 gaaaggtttt cacccacttg gtcggggatc gagcagcaga actcaacaat ctgctcaccc
     3121 acggaggctt ccgccgcagc cagtcgattg cctatcggcc ggcctgcgag cgctgtcggg
     3181 cctgcgtgtc ggtccgggtc atcgccgacg agtttcgccc gacacgcaac atgcgccggg
     3241 tgctcgaccg caattacgac cttgccggtg aaatgcggat cgcggtgccc accgccgagc
     3301 aatattccgt attccgcgct tacctagatg cccgccacta cgacggtggc atggccgaca
     3361 tgacggtgct cgattacgcc atgatgatcg aggacagtca tgttcagacg agcttgatcg
     3421 aatatcgccg acgtgcgggc gcctccattt ccgacgccca caaaggcgaa ctcttggccg
     3481 tagcgctgac tgacgtgctc aaggatgggt tgtcgatggt ctattcgttc tacgagcccg
     3541 cacccgagca ccgctcgctc ggtaccttta tgattctcga ccacattgca cgggcgcgac
     3601 gcatgggcct cgcatatgta tacctcggct attgggtccg gggctcccgc aagatggatt
     3661 acaaggggcg tttcctgccc caggaacggc tcgcaccgga gggatggatg cggatcgaaa
     3721 ggtaatgtgc gttcgaggaa atccgtacag tgcctcccat gataaaaaat tcggcatacc
     3781 tttaaatttg ttgcgcaagc gaagcgggcc accttccgga gccggtgtca tcattcagat
     3841 caacattgca agtaattgaa aattaacaag aaatttgatt ttaaatcgcc cctttttgtg
     3901 gcgcagcaag cattccgacg ccggcatcgc gcaatgaaat gttcatgaag atgtgatcgt
     3961 cccgtttgca aaatagcaga aaagttcacg catactgtaa gcagtcaaag gggtcgatgc
     4021 ccgacggaac cgaattcgtc gaggtgcatt gccaacggga aaagattgat aggtatggtt
     4081 atgcgcgcat tcgtcaaacg acttctcatg cactacggca tctatcgccg ctatccactg
     4141 cggcgattgt cggcacttcg aaatgcatgg cgtaacgccc gggcgtgatc agattgcaca
     4201 agcaatgccg cgcggtgagg atgaacaaag cggcgaaaac tgattaagcc gagggatgat
     4261 taagccgagg cacatgggct gcaaggctcg gcacggctca ccagctcctg gctttcgcgt
     4321 ctgttaggtt tgaattttcg taggcgtcga catactgacg gatatccgcc atttccatcc
     4381 attgacatac gcatcgttca gccgaatttg ttcgaccgcg gaaacccctt cggggcgatg
     4441 cgcccggcgt cggcacggtt accgcgccaa tcggctagtt ctttcatggt gagggtaaac
     4501 acgcgcccgg cagagtccgt ccatgacaat ccatctgcgg ccgtgaatgt cttgatgtca
     4561 gacaggccgc cgtccttgta gcgctgcagc cggacgccgc gaccgcgcgt catctctggg
     4621 acctggtcga gcccaaacac caccagcttg cggttctcgc cgattgccgc ggcgatctcg
     4681 ccctcggcca cgcacatggc gcgtgcctcg tcgggaggtg agacgttgag gacctgtttg
     4741 cctttgcggg tattggcaat gcactcgtcc tctggaacca ggaaccccct gccctcccgg
     4801 ctcgccacca gaaacttgcg gccaccggct gcggtgaaca ccgacacgag atcggcctcc
     4861 tgctccagat caatgaacag gcgcaccggt tcgccgtggc cccgcccgcc cggaagcttg
     4921 ctcgcctcga tcgtgtagaa acgcccattg gtcgcgaata tcaggcactt cgatgtcgtc
     4981 tccgcaggaa acgaaaagcg caacccgtca tcggccttga aggccacgcc cgacaagtcc
     5041 gtaacagtgc ccttgagggc gcgaatccag cccttctgcg acaccaccac ggtgatcggc
     5101 tcgcggatca ccatggcctc ctcgatcgcc gcttcgtcgt gctcgggagc ctgggagaaa
     5161 gtggtgcgac gcttcccgag cggcgtcttc gggccgaaag tggtgcgtac ggccttgatc
     5221 tcgtccgcaa cggtcctcca ctgatccttt tcggatttga tcaggtcccg cagtttcttg
     5281 cgttcggcgc gcaaatccct gtcctcgccc cggatttcca tctcctcgag cttgcgcaga
     5341 ttgcgcaggc gcatgttgag gatggcctcg gcctgaatct cgctgagctt gaaggctttc
     5401 atgaggacgg gcttgggttc gtcctcggtg cggataatct tgatgacgcg gtcgaggttg
     5461 agataggcga ccagataccc gccaagcact tcgaggcgat tttcgatttg ccgcagccga
     5521 tgattggaac ggcgcagcag cacatcgcgg cggtgatcga gccattcgcg caggacttcg
     5581 gctaggccga gcaccttggg aatttttccc ttcaccaaca cattcatgtt gagcggaatg
     5641 cggctttcga gctcggtaag cttgaacagc gattccatca gaagctcggc gtcgaccgtg
     5701 cgggcgcgcg gttcgataac gaggcgcaga tcctcggccg attcgtcacg cacatccccg
     5761 accagcggaa gcttcttgtc gttgaggagt tccgcgattt tctcaaccaa tcgcgatttc
     5821 tggaccagcc acgggacctc ggtaatgacc acctgccagc cgccgcgccc ggtgtcttcc
     5881 ttgtcccaaa gcgcgcgcac ccggaacgag ccgcggcccg tgatataggc ctcggcgatc
     5941 gccgccggat catcgacgat cacgccacca gtcgggaaat ccggccccgg cacatacttg
     6001 aggagattgc ggctcttcgt gttgggatgc tcaatgaggt ggagcgccgc atcgcatagc
     6061 tcggccgcat tgtgcggcgg gatcgaggtc gccatgccga cggcgatgcc ctgcgatccg
     6121 ttggcgagca ggttcgggaa tgcgcccggc agcaccacgg gttcttattc cgtgccgtcg
     6181 taggtcggcc ggaagtcgac cgcgttctcg tcgatgccgt cgagcagaag gcgcgccacc
     6241 tcggtgaggc gcgcttccgt atatcgcatc gccgcgggat tatcgccgtc gacgtt
//
LOCUS       DATILV010000333         2981 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1099507, whole genome shotgun sequence.
ACCESSION   DATILV010000333 DATILV010000000
VERSION     DATILV010000333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2981)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2981)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2981
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1099507"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..256)
                     /gene="ccmI"
                     /locus_tag="VLJ17_07565"
     CDS             complement(<1..256)
                     /gene="ccmI"
                     /locus_tag="VLJ17_07565"
                     /inference="COORDINATES: protein motif:HMM:TIGR03142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcmI"
                     /protein_id="HSV22870.1"
                     /translation="MTLWLVLTIMTSAAAVLVSAPFIRRFDRPQLESAGDIEVYRDQL
                     KEVENERRQGQIDDTQAETARIEIKRRALAADRLEQPMMPQ"
     gene            complement(253..744)
                     /locus_tag="VLJ17_07570"
     CDS             complement(253..744)
                     /locus_tag="VLJ17_07570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008126910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein"
                     /protein_id="HSV22871.1"
                     /translation="MILGRSGLRAFLGMLVVLAACTVFARAVTPDEVLPDPKLEIRAR
                     AISQVLRCVVCQNQSIDDSNAPLAHDLRVLVRERLASGDTDKQALDFIVARYGNFVLL
                     NPPMQLNTVALWLGPALFLLVAAMGFGQYVRRRSIDRTTQVPLTSTEQKRIDELLGER
                     NAT"
     gene            complement(747..2732)
                     /locus_tag="VLJ17_07575"
     CDS             complement(747..2732)
                     /locus_tag="VLJ17_07575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018065805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase CcmF/NrfE family subunit"
                     /protein_id="HSV22872.1"
                     /translation="MAPEIGYFALLLALFVSMTQSAMPFVAARRRDLAVAAYVDQAAL
                     GQFIFLVVAFTSLVYAFVTSDFSVEVVTANSHTAKPLIYKISGVWGNHEGSMLLWVLI
                     LSLFGAAVAIFGRNLPDRLRIKVLGVHGMVGFGFLAFITFTSNPFARLLQAPDDGNGL
                     NPILQDPGLAIHPPFLYLGYVGFSMAFSFAVAALIDGKVDACWARWVRPWVLAAWCFL
                     TIGITLGSAWAYYTLGWGGWWFWDPVENASFMPWIAGTALLHSALVVERRNALVSWTI
                     LLAILTFSLSLIGTFLVRSGVLTSVHAFALDPARGVFILGLILVATGGALTLYAFRVP
                     HLKYGAPFAPISRESGLTANNVLLSAAAATVFLGTFYPIIVDMMGDDKISVGPPYYNR
                     TFVPLMIPLLLVMVIGPMLKWKRDNIRAALGRLKYSALASLFTAILVLIVTLGRNAFA
                     AAFMAVAVWLVVGSLAALAYRIRLGSAPLATTLRLARTTPRAFYGLVIAHAGMGITVA
                     GITGMTSWATEKIEMLRPGQSLDLSGYNLRFRTVGNMPGPNYEAERGTFDVTRNGRFV
                     GELFSERRFYPVRQQQTTAAGIRTNLVSNLYVAIGEPDGNGAWAVRFYYHPFMPWVWI
                     GALTMAFGGFVSLSDRRLRVGVPQRLPRHAIPAPAGT"
BASE COUNT          750 a          871 c          811 g          549 t
ORIGIN      
        1 gttgcggcat catcggctgt tccagcctgt cggcagccag tgcgcgtctc ttgatctcaa
       61 tgcgggcggt ctccgcctgt gtgtcgtcaa tctggccttg tcgtcgttcg ttttcgactt
      121 ctttcaattg atcgcgataa acctcgatgt cgccggccga ttccaactga ggccgatcga
      181 atcgccgaat gaagggcgca gacaccaaaa ctgccgccgc ggaagtcatg atcgtcagaa
      241 cgagccacaa cgtcatgttg cattcctttc gccgagcagt tcgtcaatgc gcttctgttc
      301 ggtgctcgtc aaaggcacct gcgtggttcg gtcgatagac cgtctgcgca catactgacc
      361 gaaacccatt gcggcaacca gcagaaacaa cgccggacca agccagagtg ccacggtatt
      421 gagctgcatt ggcggattta gcagaacgaa gttgccataa cgggcaacga tgaagtcaag
      481 cgcttgctta tcggtatcgc ctgatgccaa ccgttctcgt accagcaccc gaaggtcgtg
      541 cgcaagcgga gcattggagt catcgatgct ttggttttgg caaacaacgc aacgaaggac
      601 ctggctgatc gcgcgagcgc gtatttcaag tttgggatcc ggtaggacct cgtccggcgt
      661 caccgcacgg gcaaagacgg tgcacgcggc cagaacgacc agcattccca ggaaagcgcg
      721 aagtcctgac ctgcccaata tcattctcat gttccggccg gggctgggat ggcgtggcgc
      781 ggtaagcgct gcggtacgcc gacgcgcaga cgtcggtcgg acagcgatac gaatccacca
      841 aacgccattg tgagcgcgcc gatccacacc caaggcataa acggatggta gtagaaacgc
      901 acggcccaag caccgttacc gtcgggctcg ccgatcgcaa catataaatt ggagactaaa
      961 ttggttctga tgccggcagc agtcgtctgc tgttggcgca ccggataaaa gcgtcgttcg
     1021 ctgaaaagct cgcccacaaa acgaccgttg cgggtgacgt cgaaagtacc tcgctcggct
     1081 tcatagttgg gacccggcat gttgcccacc gtacggaagc ggagattgta tccggacagg
     1141 tcaaggctct ggccaggacg caacatttcg attttttctg ttgcccagct ggtcataccg
     1201 gtgatccccg cgaccgttat acccatccca gcatgggcga taacgagccc atagaatgct
     1261 cgtggtgtgg tgcgggcaag cctcagcgtg gtcgccaacg gggcgctgcc caggcgtata
     1321 cgatatgcca aagccgccag ggacccgaca accaaccaaa ccgccaccgc catgaacgcc
     1381 gccgcaaagg cgttacggcc gagtgtgacg attaacacca ggattgcggt gaacaggctt
     1441 gcaagtgctg agtatttcaa gcgcccgagg gccgcacgaa tattgtcgcg cttccatttg
     1501 agcatcggtc caatgaccat caccagcagc aacggaatca tgagcggcac gaacgtcctg
     1561 ttataataag gcggtcccac cgaaatctta tcgtcgccca tcatatcgac gataatcgga
     1621 taaaatgtgc caagaaatac ggtcgcggca gccgcgctca gcaatacatt gttagcggtc
     1681 agaccgctct cacggctgat cggcgcaaac ggagccccat atttgagatg cggcacacgg
     1741 aaagcgtaaa gcgtcaaagc accgccggta gcgaccaaaa tcaatcccag gatgaagacg
     1801 cctcgcgccg gatccaaggc aaatgcgtgt acgctcgtca gcacgccgga ccgtaccaaa
     1861 aaagtgccga tcaagctcaa tgaaaacgtc aagatcgcga gcaggatcgt ccagctcacg
     1921 agtgcgttgc ggcgttccac gacgagtgcc gagtgcagga gtgcggtgcc ggcgatccaa
     1981 ggcatgaacg atgcgttttc gaccgggtcc caaaaccacc acccacccca gccgagggta
     2041 taataagccc atgcgctgcc gagcgtaatt ccgatagtca ggaagcacca tgccgccagc
     2101 acccaaggcc tcacccaacg tgcccagcac gcatcgacct tcccatcgat cagcgccgcc
     2161 accgcaaacg agaatgccat cgaaaatccg acatagccta aataaaggaa cggtgggtgg
     2221 atcgcgaggc ccggatcctg caaaatcgga ttgaggccgt tgccatcatc aggtgcttga
     2281 aggaggcgcg cgaacggatt tgacgtgaac gtgatgaagg ccaaaaatcc gaacccaacc
     2341 atgccatgta cgccgagtac cttgatccgc aaccggtcgg gcagattgcg accaaaaatt
     2401 gctactgcgg cgccaaataa ggacaaaata agaacccaaa gcagcataga tccctcatgg
     2461 ttcccccaca ctccagaaat cttgtaaatc aatggcttgg cggtatgcga gttggccgtt
     2521 acgacttcga ctgaaaaatc ggaggtgacg aacgcgtaaa ccaaggacgt aaacgcaacc
     2581 acgaggaaaa tgaattgtcc taatgcggcc tgatctacat atgcggcgac cgcgagatca
     2641 cggcgacgcg cagccacaaa tggcatcgcc gattgcgtca tagaaacgaa aagcgccaga
     2701 aggagcgcga aataacctat ctcaggcgcc atcgaacgct cccgtcgccc tcggacatta
     2761 agagaggttg attgatctgg cgtcgacggg ccatcaagtt cttctcgctt tccaagtcat
     2821 gtttatccta tggcgattcc gccaagaggg aatcaaaaca cgttaatgcg tcatcccggc
     2881 gaagatccgg taatctccac aaagctgcgg agtactgcat tcccactttc accggaatga
     2941 taccggagaa tggccaagcg ccgcacccga tagatctcac c
//
LOCUS       DATILV010000334         5586 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1357525, whole genome shotgun sequence.
ACCESSION   DATILV010000334 DATILV010000000
VERSION     DATILV010000334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5586)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5586)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5586
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1357525"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..519
                     /locus_tag="VLJ17_07580"
     CDS             <1..519
                     /locus_tag="VLJ17_07580"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HSV22873.1"
                     /translation="VVVKRDGAIYFTDTYGALRLRDKDPNKELDFNAVFRWKDGKLTL
                     MTKDMPNTNGLAFSPDEKYLYVNGSRDSYVNRYEVQADGTLANGKLLIDMRGLTEPGI
                     TDGLRVDTKGNLYETGPGGVWIISPEGKHLGTIRAPEISTNVGFGDADRQTLYIAARS
                     SIYKIRVNTPGI"
     gene            complement(565..972)
                     /locus_tag="VLJ17_07585"
     CDS             complement(565..972)
                     /locus_tag="VLJ17_07585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSV22874.1"
                     /translation="MDIKPSGSVPSRRMPGEWFTGTVWQDPIIEAPAPARIRSARVSF
                     EPGARTAWHTHPLGQTLHVVSGLGRVQTWGGPIREIRPGDTVWIPPGEKHWHGASPTS
                     AMVHIAMQEALDGAHVTWMEHVADAQYGAAVGS"
     gene            1125..2681
                     /locus_tag="VLJ17_07590"
     CDS             1125..2681
                     /locus_tag="VLJ17_07590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HSV22875.1"
                     /translation="MSQLPNLGEVLRFNARIFPDKIGARDLGRAMTFRQWNARSCRLA
                     NALIGLGLAKGNRVAVLAYNCVEWLEIYAATAKAGLIAVPINFRLVGEEIGYIVENCE
                     AAAFIVQDDLLEPVERARPNLSVPSRNFIHFGGPICPAGYRAYEDLVAAARDSEPDIA
                     VLPADPWTLMYTSGTTGKPKGAIRSHRGSAQLSLITEAEMGFGRRDAALLVMPMCHAN
                     SLYFFGAFAYCGASCTVYSRKSFDPEHLLHTLSEIGATFTSLVPTHYIMMLALSAAVR
                     ARYDVQRVTKLLVSSAPARRDTKLAIMDYFRNSGLFELYGSTEAGWVTMLHPQEQFTK
                     LGSVGRECVGSAPIRLLDPAGNEVADGETGELYSCNPYTFDGYWRLPDKTKEAFRGNY
                     CSVGDLARRDHDGFYYLVDRKNNMIISGGENIYPSEIENLLGMHDDVKEVAVVGVADP
                     KWGERVHAVVVLHAGASVTEAELAAWCRDRIAGYKRPRSISFIGDDDMPRTATGKILH
                     RVLKARFSEG"
     gene            2911..3348
                     /locus_tag="VLJ17_07595"
     CDS             2911..3348
                     /locus_tag="VLJ17_07595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22876.1"
                     /translation="MRVFAASLAMMGLASTAMAQSRLACVRATDQTVTSLAECATYER
                     TRVACFVTRSPSDNDVWIIASRKLSRVVGELMIKIARMAEISNDDVVERLQAASEKML
                     TTMDGSCVNVPVLARKYEDFCTKLTDNPNQLLVDARNCMLSDR"
     gene            3470..5194
                     /locus_tag="VLJ17_07600"
     CDS             3470..5194
                     /locus_tag="VLJ17_07600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HSV22877.1"
                     /translation="MSNTIDLNTDEAASAAWIARFLKARGVDRIFGLQGGHIQPIWDH
                     VARQGIRIIDARHEAAAVHMAHAHAELTGLLGVAMATAGPGVTNTVTAMANASLARAP
                     VLLIGGCTSRPQANMGPLQDIPHVDILRPLTRAARTARVAEHVVRELDEAVALAMGDM
                     GEPGPVYIEIPTDVLRTSVPPQLVLDEWMTAKPPRIVPPDSAEIALAVDALWSARRPL
                     VITGRGARHAAAELTRLLDASGALYLDTQESRGLVPSDHPAVIGAMRAAAMTDADLVV
                     LIGRKLDYQLGYGSPAVFPQARFIRIADTAGELIDNRRGQPEIMASPALALRAMLEAA
                     GNRRSNVDTGWADKLRRKHQERMASVAVANETLGADGKIHPRAIFDAIAEVTDPDYIA
                     VADGGDLLSFARVGLAARTYMDAGAFGCLGIGVPFAIAAALAYPERQVISVNGDGAFG
                     INAMEIDTAVRHGAKAVFIVSNNAAWNIERYDQEANYGGRVVGTTLRHSDYAAMARAL
                     GAHGERVEDPAKLSCALRRALVNAPALVDVVTSQSAISSDARKGLGFVPDFQPLTAWD
                     EAERKRRL"
     gene            complement(5284..>5586)
                     /locus_tag="VLJ17_07605"
     CDS             complement(5284..>5586)
                     /locus_tag="VLJ17_07605"
                     /inference="COORDINATES: protein motif:HMM:NF012273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione binding-like protein"
                     /protein_id="HSV22878.1"
                     /translation="PRLMGLTPDETVITAAMPKAHVVFSELARLLGEQTYFAGEAVSL
                     ADMLIAPQLDFLAATPEWSALTAKGANLVAWLDRMNARPSLKATTWEQVSEMAKAA"
BASE COUNT         1025 a         1769 c         1744 g         1048 t
ORIGIN      
        1 gtcgtggtca agcgcgacgg cgccatctat ttcaccgaca cctacggtgc gctccgcctg
       61 cgcgacaagg atcccaacaa ggaactcgat ttcaatgcgg tgttcaggtg gaaggacggc
      121 aagctcacgc tcatgaccaa ggacatgccc aataccaatg ggctcgcctt ctcgcctgac
      181 gaaaagtatc tttacgtcaa cggcagccgc gacagctatg tcaaccgtta cgaggtgcag
      241 gctgacggga cgcttgccaa cggcaagctg ctcatcgaca tgcgcgggct caccgagccc
      301 ggcatcaccg acgggctgcg tgtcgacacc aagggcaatc tctacgagac gggtcctggg
      361 ggcgtgtgga tcatctcgcc ggaaggcaag cacctcggca ccatccgggc acccgaaata
      421 tccaccaatg taggcttcgg cgacgccgac aggcagacgc tctacattgc ggcgcgcagc
      481 agtatctaca agatcagggt gaatacgccg gggatatgac tatcgaggac ctgtagccgg
      541 attacgctct tcgcttcttg cgggctacga acccaccgct gccccgtact gcgcgtcggc
      601 gacgtgctcc atccaggtca catgggcgcc gtcgagcgcc tcctgcatgg cgatgtgcac
      661 catggcgctg gtgggactgg cgccatgcca gtgcttctcg ccgggcggaa tccacaccgt
      721 gtcaccggga cggatttcgc ggatcgggcc gccccaggtt tgtacacgcc cgagccccga
      781 caccacatgc agggtctggc cgagcgggtg ggtgtgccag gcagtgcggg cgcccggctc
      841 gaagctcacg cgcgccgacc ggatgcgcgc tggcgccggc gcttcgatga tcgggtcctg
      901 ccagaccgta ccggtgaacc attcgccggg catgcggcgt gacggcacag aaccggatgg
      961 cttaatgtcc atgatttctc cttgtgtgga tgtcgattgc cgcgaatgcc cgccttcggt
     1021 gtgccatgcg atatgatctg gccggaacct gcgctttgtt cccgaatgcg gtatagcacg
     1081 accacgatca ttcgaaacaa cgtgaaccgt cccgggcagg tgcgatgagt cagttgccga
     1141 acctcggcga agtcctccgc ttcaatgccc gcattttccc cgacaagatc ggcgcccgcg
     1201 accttgggcg cgcgatgacg ttccggcaat ggaacgcacg ttcgtgccgg ctcgccaacg
     1261 cgctcatcgg gttggggctt gcgaagggca atagggtcgc ggtgttggcc tataattgcg
     1321 tcgaatggct cgaaatctat gccgcgaccg caaaggccgg actgatcgcg gtgccgatca
     1381 acttccgtct ggtgggcgag gaaatcggct atatcgtgga gaattgcgag gcggccgcgt
     1441 tcatcgttca ggatgatctc ttagaaccgg tcgagcgcgc gcgcccaaat ctttcggttc
     1501 cgtcgcgcaa tttcattcac ttcggcggcc cgatctgccc ggcgggctac cgcgcctatg
     1561 aggacctcgt cgctgcagcg cgcgacagcg agcccgacat cgcggtgctg cctgccgacc
     1621 cctggaccct gatgtacacg tcgggcacca ccggtaagcc gaaaggcgcg atccgcagcc
     1681 accggggcag cgcccagctc tcgctcatca ccgaagccga gatgggcttc ggccgccgcg
     1741 acgccgcgct cctggtgatg cccatgtgtc acgccaattc attgtatttc ttcggcgcgt
     1801 tcgcgtattg cggtgcaagc tgcacggtct attcacgcaa gagcttcgat cccgagcact
     1861 tgctgcatac gcttagcgag atcggcgcga ctttcacatc tctggtgccg acccactata
     1921 tcatgatgct cgccctgtcg gcggcggtgc gtgcgaggta tgatgtgcag cgggtcacca
     1981 agctgctggt ttcttccgcg ccggcacggc gggataccaa gctcgctatc atggactact
     2041 tccgcaattc cgggctgttc gagctttacg gatcgaccga agccggctgg gtgaccatgc
     2101 ttcacccgca ggagcaattc actaagctcg gctccgtcgg ccgcgaatgt gtgggctcgg
     2161 cgccgatccg gctcctcgat cccgccggca acgaggtggc cgacggcgaa accggcgaac
     2221 tctattcgtg caatccctac acgttcgacg gctattggag gctgcccgac aagaccaaag
     2281 aggcgttccg tggcaactat tgctccgtcg gcgatctcgc ccgccgcgac catgacggct
     2341 tctattatct ggtcgaccgt aagaacaata tgatcatctc gggcggcgag aacatctatc
     2401 cgtcggaaat cgagaacctg ctcggcatgc atgatgacgt gaaggaggtc gcggtcgtcg
     2461 gcgtggcgga cccaaaatgg ggcgagcgcg tgcacgcggt cgtggtccta catgccggcg
     2521 caagcgttac cgaggccgag cttgccgcat ggtgccgtga ccgcatcgcc ggctacaagc
     2581 ggccgcgatc aatctcattc atcggcgatg acgacatgcc gcgcactgcg acgggaaaaa
     2641 tcctgcaccg ggtgctgaag gcacggtttt cggaaggcta gagcaaattt cgttctgatg
     2701 gagttacaca acggtgtcat cgcccgcaaa aggcgggcaa tccagtaatc ccggcgatgt
     2761 ggcggagtac ttcccgcttt agccggagtg acactggggg acgcgtcctc gccaggcgca
     2821 aggggttcct ggcctgtggt acgatccagc tcacccgctg cgcgacatcc aacgcggcca
     2881 tgcgcagcga taaagatggg ggtagcgctt atgagggtct tcgctgcttc gcttgcgatg
     2941 atgggcctag cttcaaccgc gatggcgcaa tcacggctgg cttgtgttcg cgctactgac
     3001 cagaccgtca ccagcctggc tgagtgtgcc acgtatgaaa gaacaagagt cgcctgtttc
     3061 gtcacccgat caccttccga caatgacgtc tggatcattg cgagccggaa gctatcccgc
     3121 gttgtgggtg agttgatgat caaaatcgcc aggatggccg aaatatctaa cgacgatgtt
     3181 gtcgaacgac tgcaggcagc aagtgaaaaa atgctcacaa cgatggacgg aagctgcgtc
     3241 aacgttcccg tgctggcgag aaaatatgag gatttttgta cgaagctgac cgataatccg
     3301 aatcagctcc tggtcgatgc cagaaactgc atgttgagcg atcgatgagt tgaacaaggc
     3361 aatcgacaga cccgacgctg ccagattttc ccgcatcttt ggtgctctcg gttaatcgtc
     3421 ggaatcattt cttttgctgc tttccgaaag gccgctattc gggaccaaca tgagcaacac
     3481 tatcgacctc aacaccgacg aggcggccag cgccgcctgg atcgcgcgct ttctcaaagc
     3541 ccgtggcgtt gaccgtatct tcggcctcca gggcggtcac atccagccga tctgggatca
     3601 cgtggcgcgc cagggtatcc gcatcatcga cgctcgccac gaagccgcgg ccgtccacat
     3661 ggcgcacgcc cacgcggaat tgaccggcct gctcggtgtc gccatggcga ccgcagggcc
     3721 gggcgtgacc aacaccgtta ctgccatggc caatgcgtcg ctcgcccgcg ccccggtgct
     3781 gctgattggc ggctgtacgt cccggcccca ggccaacatg ggaccgcttc aggacatccc
     3841 tcacgtggac atcctgcggc ccttgacccg ggcagcgcgc accgcccgtg tcgccgagca
     3901 cgtggtgcga gaactcgatg aagcggttgc cctcgccatg ggcgacatgg gcgagcccgg
     3961 cccggtctac atcgagattc cgactgacgt gttgcgcaca tcagtgccgc cgcaactcgt
     4021 gctcgacgaa tggatgaccg cgaaaccgcc tcgtatcgtg ccacccgatt ccgccgagat
     4081 tgcgctggcg gtcgacgcct tgtggtcggc gcgacggccg ttggtcatta ccgggcgcgg
     4141 cgccaggcac gcggccgcgg agctcacgcg cctcctcgat gcgagcgggg cgctttatct
     4201 cgacactcag gagagtcgcg gcctggtgcc gtcggatcat ccggctgtga tcggcgccat
     4261 gcgggccgcc gccatgacgg acgccgatct ggtggtgctg atcgggcgca agctcgacta
     4321 tcagctcggc tacggttcac cggcggtatt tcctcaagcg cggttcatcc ggatcgccga
     4381 tacagccggc gagctgatcg acaaccgccg tggccagccg gaaatcatgg cctctcctgc
     4441 gcttgcgttg cgtgcgatgc tggaagccgc cggcaatcgc cgctccaatg tcgataccgg
     4501 ctgggcggac aagctgcgcc gcaagcacca ggagcggatg gcatctgtcg ccgtcgccaa
     4561 cgagactctg ggcgcggacg gcaagattca tcctcgcgcg atcttcgatg caatcgccga
     4621 ggtcaccgat cccgactaca tcgcggttgc ggacggcggc gatctcttga gcttcgcgcg
     4681 ggttgggctc gcggcgcgca cctacatgga tgccggtgcg ttcggctgcc tcggcatcgg
     4741 cgtgccgttc gcgatcgcgg cggcgcttgc gtatccggaa cgacaagtga tctccgtcaa
     4801 cggcgacggc gccttcggca tcaacgccat ggaaatcgat accgctgtgc gccatggcgc
     4861 caaggcggtg ttcatcgtgt cgaacaatgc ggcctggaac atcgagcgct acgaccagga
     4921 agcaaattac ggtgggcggg tggtcggcac gaccttgcgg cactccgact atgccgccat
     4981 ggcgcgcgcg ctcggcgccc atggcgagcg ggtcgaggac ccggcgaagc tctcctgtgc
     5041 gctacggcgc gccttggtaa atgcgccagc gctcgttgat gtggtgacct cgcaatcggc
     5101 aatctcgtcc gacgcccgaa aaggcctcgg cttcgtgccg gatttccagc cgctcaccgc
     5161 ttgggacgag gcggagagga agcggcgact ttagatgggc agaggcgtga agagcttacc
     5221 ctcctcggag ttccggcgtt caatcgcttc gcggctcggc gtagaatgcc acgctcccta
     5281 ctgtcaggcc gccttggcca tttccgacac ctgctcccag gtggtggctt tcaggctcgg
     5341 gcgggcattc atccggtcaa gccacgccac caggttggcg cctttggcgg taagtgccga
     5401 ccactccggt gtcgccgcga gaaagtcaag ctgtggcgcg atcagcatgt cagccagcga
     5461 cacagcctcg cccgcgaagt aagtttgctc gccgaggagc cgggccagct cgctgaacac
     5521 cacatgcgcc ttgggcatgg cggcggtgat gaccgtctcg tcaggtgtca accccatcag
     5581 gcgcgg
//
LOCUS       DATILV010000335         1634 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2379582, whole genome shotgun sequence.
ACCESSION   DATILV010000335 DATILV010000000
VERSION     DATILV010000335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1634
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2379582"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(199..>1634)
                     /locus_tag="VLJ17_07610"
     CDS             complement(199..>1634)
                     /locus_tag="VLJ17_07610"
                     /inference="COORDINATES: protein motif:HMM:NF019351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HSV22879.1"
                     /translation="IPTDYLGTFTVVCVDSNVMSPDGSSQYAFTYVLSPSAPTGLAAQ
                     TALVGPTASTPAALDGHVDPRPIIDIGVMNGNIPAPLVQFDEDDELFLTLTNVGMIMR
                     PDLFEQHTIHFHGYPNASSFYDGVPDASIAINIGASFTYYYLAPDAGTYFWHCHITPP
                     EHLQMGMVGQLHVRPRQDRVPSGTSLFTSLGLQNGLNCGATGTASTCTPLTSVTPDPR
                     TVCSPGRDILCSATMPAVNTQIAEGTDKLGNPQRYTYNDGDASTAYDVEYPLQMHGFD
                     PNFHFVGMTFNPEPFVDMKDKYFLLNGRSYPDTVGSNTTSGLPIAPAGPQATVSSDGS
                     LHYSQPMPAVINIPVGGRALLRLVNLSVSEYHTLQSLGPRMKEVGFNAKLLRDQTGTN
                     TEFYTNSITLGGGESLDVILDASDAGCGGIAGCSTTLYPAGSVFYLYTPQLDHLSNDA
                     ENFGGLMTEVHICNSVSGGNTFGNTCN"
BASE COUNT          317 a          448 c          549 g          320 t
ORIGIN      
        1 taaaccgccg ctccgtccgg ctggttgagg taagcctgtt gcgccgtcag gttgaacgtc
       61 accgtggtgc cgccggtgat accgggagcc gcggcaaaag ccgcagccgc gagccacatc
      121 cccgatgcca ccagtgccag aaagcgtccg ctcttcaaga tcgcgctctt cattgtcgtt
      181 gccctcgtcg ccgctttctt aattgcaggt attcccgaac gtattgccac cagagacgct
      241 gttgcagatg tggacctcgg tcatgagtcc accgaagttt tcggcgtcgt tcgaaaggtg
      301 gtcaagctga ggcgtgtaaa gatagaagac gctcccggcc ggatagagcg ttgtcgagca
      361 tccagcaatt ccgccacacc cggcgtcgct ggcatcgagg atcacgtcca gcgactcacc
      421 gccgccgagg gtgatcgagt tggtgtagaa ctcggtgttg gtcccggtct ggtcgcgcaa
      481 gagtttggcg ttgaacccga cctctttcat ccgaggaccc agcgactgca gcgtgtgata
      541 ttcggatacc gacaggttca ccaggcgaag taacgctcgt ccaccaaccg gaatgttgat
      601 gacggcgggc atcggctgcg agtagtgcag cgaaccatca ctagacactg tggcctgggg
      661 accggccggc gcgatgggga gtccggatgt ggtgttggac cctacggtgt ccgggtagct
      721 ccgcccattg agcaggaaat atttgtcctt catgtccaca aacggttccg ggttgaaggt
      781 catgcccacg aaatggaaat tggggtcgaa cccgtgcatc tggaggggat actcgacgtc
      841 gtaagccgtg gaagcgtcgc cgtcgttgta ggtatagcgt tgcgggttgc ccagcttgtc
      901 ggtgccttca gcgatctgcg tattcaccgc cggcatggtg gcggagcaca ggatgtccct
      961 gccggggctg caaaccgtgc gcggatccgg cgtgactgaa gttaacggtg tgcaggtgct
     1021 cgcggtgccg gtggcaccgc agttcaggcc attctggagg cccaaggagg taaagagact
     1081 tgtgcccgac ggcacgcggt cctgccgcgg gcgcacatga agctgcccga ccatgcccat
     1141 ctgcaggtgc tcgggcgggg tgatgtggca atgccagaag taagtgcccg cgtcgggcgc
     1201 cagatagtag taggtgaagc tggcgccgat gttgatcgcg atggaggcgt cgggcacgcc
     1261 gtcatagaaa gacgacgcgt tcgggtagcc gtggaagtga atggtgtgct gctcgaacaa
     1321 gtccgggcgc atgatcatgc cgacgttggt caaggtgagg aaaagttcgt cgtcctcgtc
     1381 gaactgcacc agcggcgcgg ggatgttgcc gttcatcacg ccgatgtcga tgatggggcg
     1441 gggatcgacg tggccatcca gcgctgcggg agtcgacgcg gtcgggccga ccaacgcggt
     1501 ttgcgcggct aaccctgtcg gggctgaagg tgaaagaaca taggtaaagg catactggga
     1561 cgatccatcc ggagacatga cgttgctgtc cacgcagacc acggtgaaag tgccgagata
     1621 gtccgtcgga attg
//
LOCUS       DATILV010000336         2458 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1612179, whole genome shotgun sequence.
ACCESSION   DATILV010000336 DATILV010000000
VERSION     DATILV010000336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2458)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2458)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2458
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1612179"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..252
                     /locus_tag="VLJ17_07615"
     CDS             <1..252
                     /locus_tag="VLJ17_07615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22880.1"
                     /translation="FVFDLPDIGPPPLSDRKIALIRPVTVRREWANTARNPIPSYVND
                     IAAALMETHCVVVVADLQDDEEWLLCDLPTLRNLNPLSH"
     gene            complement(374..2233)
                     /locus_tag="VLJ17_07620"
     CDS             complement(374..2233)
                     /locus_tag="VLJ17_07620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22881.1"
                     /translation="MIVLVVLGGLFLFAIPPLIPVRYRSWVVDNGARAMGLIIILFAF
                     ASTSFVFVPDGHLGHLFRVYGGGPLTDGRIVAANGENGPQAEVFTPGFHTRALLNVIY
                     TVDTNKEEVAIPQGKVGVLTARDGAPLRSGQAFADPFPPKYGYQMLDATTFLGNGGQR
                     GPQLTVLTPGKWRINRYLWDVAEADAKEVKAGYVGVVKSNVYADIDFGTLKAVKPEKC
                     DVIANKEVSAGRLEAPIVPVGCIGVWKDSLQPGKYYFPPDAFLITEIDTRAQVWSYAG
                     GYKRSNIALTVDSKGEIVQTRTEENVPVDKDNADRAVFVKMEGWDVPLELRVVAQVSP
                     AEASCVVAGVGTLKDVEDRVLTPSIRAITRDVAGGTYEVTEAKVDENGKPVLDNDGKP
                     IFITVNRPTKVLDLINQRPLIEGEIERRIRPEAQKSCITIREVRLGEPAIPPELLVAV
                     RREQLATQLAKAFIQERAAQEKRIDSEKAKETANQQGTLVRAEIGVQASVQNALAARN
                     EGQGERDKLTAIAAGQKSQVEVLGPEATRQLRQFELTLDTLAKFANANPQVIAAALTN
                     ASKFVPQTSINLGGSGSGSLLDAAGLLGGLITAGQTPAAPAASTPPAPAVPGR"
BASE COUNT          468 a          750 c          718 g          522 t
ORIGIN      
        1 ttcgtcttcg accttccgga cataggtccg ccgccactct ccgatcgcaa gatagcgctt
       61 atccggccgg tgacggtgcg ccgcgaatgg gccaacacgg cacgcaatcc gattccctcc
      121 tacgtcaacg atatcgccgc ggctctcatg gagacgcatt gcgtcgttgt cgttgctgac
      181 ttgcaggatg atgaagaatg gttgctttgc gatcttccga cactccggaa cttgaatccg
      241 ctaagccatt gattttgtgg cgctccctag ggaacggcat gaattgagct gaaacaaggg
      301 gttggattga agtttgggca gatgtcctcc cactgatttt caatgccttt cagtaagccg
      361 gcccaaacct gcgtcacctt ccaggaacgg ccggagccgg cggtgtagag gccgcaggag
      421 ccgcaggcgt ctgacccgcc gtgatgagac cgccgagcag gccagccgca tcaagcagcg
      481 accccgatcc gcttccgccg aggttaatcg aagtttgcgg cacgaacttg gacgcgttcg
      541 tgagcgcggc cgcgatgacc tgggggttcg cattggcgaa cttcgcgagc gtatccagcg
      601 tgagttcaaa ctggcgcagt tgtctcgtcg cctctgggcc gagtacttcg acctggcttt
      661 tctggcctgc ggcgatcgcc gtcagcttgt cgcgctcgcc ctggccctca ttgcgcgccg
      721 ccaacgcgtt ttgaacggat gcttgcacac cgatttccgc ccgcacgagc gtgccttgct
      781 gattggcagt ttccttcgcc ttttccgagt cgatgcgttt ctcctgcgct gcgcgttcct
      841 gaataaaagc cttagcaagc tgtgtcgcga gttgctcgcg gcgcaccgca accagaagtt
      901 ccggcggaat ggccggctcg ccgaggcgca cttcgcggat ggtgatacag gacttctgtg
      961 cctcaggacg gatacgccgt tcgatttcgc cctcgatcaa gggccgctga ttgataagat
     1021 cgagcacctt ggttggacga ttgacggtga taaaaatggg cttgccgtcg ttgtcgagca
     1081 caggcttgcc gttctcgtcc actttggcct ccgtgacttc gtaggttccg cccgcgacgt
     1141 cgcgggtgat cgcgcggatc gagggtgtga gcacacgatc ctcgacatct ttgagcgtgc
     1201 caacgccggc gacaacgcat gaggcttctg ccggtgaaac ctgcgcgaca acgcgcaatt
     1261 ccagtggcac gtcccagcct tccatcttca cgaagaccgc acggtccgcg ttgtccttgt
     1321 cgaccggaac gttttcctcg gtacgcgttt ggacgatctc gcccttggaa tccaccgtca
     1381 gcgcgatatt gctgcgctta tatccgccgg catagctcca gacctgtgcc cgtgtgtcga
     1441 tctcagtgat caggaaggca tccggcggga agtaatactt gcccggctgg agcgaatctt
     1501 tccagacgcc aatgcagccc acgggaacga tcggcgcctc cagtcgcccg gcactcactt
     1561 ccttgttagc aatgacgtcg catttttcgg gcttcaccgc tttaagagtg ccaaagtcga
     1621 tatcggcgta aacgtttgac ttgacgacgc cgacgtagcc agccttgact tcctttgcgt
     1681 ccgcctccgc aacgtcccag agatagcgat tgatgcgcca tttgccgggg gtgagcacgg
     1741 tcaattgcgg accgcgctga ccgccgttgc cgagaaacgt cgtggcgtcg agcatttgat
     1801 acccgtattt cggcgggaac ggatccgcga acgcctgccc ggatcgtaac ggcgcaccat
     1861 cgcgagctgt cagaacaccg accttccctt gcgggatcgc cacctcctcc ttgttggtgt
     1921 cgaccgtgta aatcacgttg agcagggcgc gggtatggaa cccgggggta aagacctcgg
     1981 cctgcgggcc gttctcgccg tttgcggcga caatcctgcc gtcggttagg ggaccaccgc
     2041 cgtaaacacg gaacaggtgg ccgagatgac catccggcac gaaaacgaaa gacgtcgagg
     2101 cgaacgcgaa cagaatgatg atgagaccca tcgcgcgcgc accattgtcg acgacccagg
     2161 agcggtagcg cacgggaata agcggcggga tcgcgaacaa gaacagtccg cccagaacca
     2221 ccagaactat catcggcatc tccccctcgt aatcccgtca aatatcgtac ggaatgaccg
     2281 cactcctcgt ggccgcacgt tatccggtat tgctcaaatt actcccaaac ggccgtgaat
     2341 agtagcggtg gctcactgca tgccttccac tgagtgaggt tccagctctc gggatcgttc
     2401 ccggtactgc ggccattgcc tgggtgatcg agatagatga tctgagcgat gtcgggtg
//
LOCUS       DATILV010000337         2654 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4421607, whole genome shotgun sequence.
ACCESSION   DATILV010000337 DATILV010000000
VERSION     DATILV010000337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2654)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2654)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2654
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4421607"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1051
                     /locus_tag="VLJ17_07625"
     CDS             <1..1051
                     /locus_tag="VLJ17_07625"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV22882.1"
                     /translation="VNRARVINWSLVVFCLMSAVCGLAVNYWQLLVARIGVAVGEGGT
                     NPPSHSIISDLYPVSQRCTAMAIFSLGPHIGILLGFLIGGWVAQLWGWRAAFLIAGLG
                     GLFFAILSFRFLQDPERGRSDGISAREPPPVGALFRSLLRCASMRHLFAGAAIYSIAA
                     YAVVGWLPSFLIRGHGLSAGTAGTMLALILGLVGGAGTVLGGVLADRIGAGNAAWRLR
                     AVAVALLVMALGWGVVFFETRTTVVLTVLVLPGALLGLYLGPTFAMVQSLVEPAVRAT
                     AAALLLFVFNLVGLGSGPLAVGVLSDALLPRFGPDSPKNALLLLIPPLCVWAAYHYHA
                     AARTIGVDLDNVARR"
     gene            1075..>2654
                     /locus_tag="VLJ17_07630"
     CDS             1075..>2654
                     /locus_tag="VLJ17_07630"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HSV22883.1"
                     /translation="MTDEVHVKTQPKASTATLDERLTFERLLADLSARFANVPGNQLE
                     IEIENSLGRLLDFLGFDRTTFFEFGDGGALLVLCSVAVSGVEPVPRGAFDAQLSWYVT
                     QLRSGRIVVIRSPSEFPPEAVSEAEYMRRIGMHSNLSLPLRVGGKIIGAIAFGAFRET
                     RAWPEDLIVRVKLMGEVFAQALARKRADQELLAAMDEIKRLKDRLEHENLYLRESVRI
                     KVPQGLVSCSPPFKVVIEEISQVAATGSTVLLLGETGTGKEVLAHAIHDASGRKARPM
                     VTINCAALPATLIEAELFGREKGAYTGAIARQAGRFEIADGSTIFLDELGDLPLELQP
                     KLLRVLQEGEFERLGGTRTIKVDVRVIAATNRDLARAVSEGRFREDLFYRLSVFPIEI
                     PPLRERREDIALLAWGFVKEFSKSMGKTIERIADESMAAMQEYPWPGNIRELRNVVER
                     AMILARDTTLRVTLRRSSIELPSSNTSLATLEDSDRAHILKALERSGWRIRGPEGAAA
                     LLNIKPTTLEFRIKKLGL"
BASE COUNT          460 a          778 c          817 g          599 t
ORIGIN      
        1 cgtaaaccgt gcgcgggtca tcaactggtc gcttgtcgta ttctgtctga tgagtgcagt
       61 ctgcggactg gccgtcaact attggcagct tctggtggcg cgcatcgggg ttgcggtcgg
      121 agaaggcggg accaacccgc cgtcgcactc catcatttcc gacctctatc cggtgagtca
      181 gcggtgtacc gccatggcga tcttttcact cggaccgcac atcgggattc ttctcggttt
      241 tttgatcggc gggtgggttg cccagctttg ggggtggcgc gcagcattcc tcatcgcggg
      301 gctcggcgga ctcttctttg ccatcctgag cttccgattt ctgcaagacc ccgagcgcgg
      361 tcggtcggac ggtatcagcg ctcgtgaacc gccgcctgtc ggcgcgttat ttcgctcgct
      421 tcttcgctgt gcctcgatgc gtcacctctt cgcaggtgcc gccatataca gcatcgccgc
      481 gtacgcggtg gtgggctggc tcccttcgtt tctgatccgg ggccacgggt tgagcgccgg
      541 cacggcaggc accatgctgg cattgatttt gggcttggtc ggcggcgccg gcactgtgct
      601 tggaggggtc ctcgccgatc gcataggcgc aggcaacgcg gcttggcgtc tgcgggcagt
      661 cgccgtagcg ttgctcgtga tggcgcttgg ttggggggtc gtgttttttg agacgcgcac
      721 gaccgtcgtg ttgactgtcc ttgttcttcc cggcgctctg ttgggattgt atctcgggcc
      781 aacctttgca atggtgcagt cgctggtcga gccggccgtg cgcgccacgg ccgcggcgct
      841 tctcctattc gtcttcaacc tggttgggct gggctccggt ccccttgcag tcggggtatt
      901 gagtgacgcg ctgctgccgc gcttcggacc ggattcgcca aaaaacgcgc tgctgctact
      961 cattccgccc ttatgcgtct gggcggccta ccattatcat gcagcggcgc ggacaattgg
     1021 cgtcgatctc gacaacgtgg cgcgtcgata atcggctatc gaaatgaggc gccaatgacg
     1081 gacgaagttc acgtcaaaac gcagccgaag gcttctaccg caacgctcga cgaacgcttg
     1141 acgttcgagc ggctgctcgc cgatctctcc gcccgcttcg cgaacgtgcc tggcaaccaa
     1201 ctcgaaatcg aaatcgaaaa cagcctcgga agactcctcg attttctagg cttcgatcgc
     1261 accactttct ttgaattcgg tgatggcggg gcgcttctcg ttctctgctc ggttgccgtg
     1321 agcggagtag agcccgttcc tcgaggggca ttcgacgcac agttgtcgtg gtatgtcaca
     1381 caacttcgct caggaagaat tgtggttatt cggtcgcctt ccgaatttcc tcccgaggca
     1441 gtttccgaag ctgagtatat gcgccgcatt ggcatgcatt ccaatctcag cctcccactt
     1501 cgcgttggcg gcaagatcat tggagccatt gcctttggag cgttccggga aactcgcgct
     1561 tggcccgagg acctgattgt tcgcgtgaag ctcatgggcg aggtgtttgc ccaggcactc
     1621 gcgcgcaagc gtgccgacca ggaactgttg gccgcaatgg acgagatcaa gcggctgaaa
     1681 gatcggctgg agcacgagaa cctctatctg cgggaatcgg tccgcatcaa agtgccgcaa
     1741 ggtctcgtga gctgctcgcc accgttcaag gtggtgatcg aggaaatctc gcaggtcgct
     1801 gcgaccggtt cgaccgtgtt gcttctcggc gagaccggca ccggaaaaga agtcttggcg
     1861 cacgccatcc atgacgctag cggccgaaaa gctcggccaa tggtcacgat caactgcgct
     1921 gcgcttcctg caacgttgat cgaggccgaa ttgttcgggc gggaaaaggg tgcttatacc
     1981 ggtgcaatcg cgcgccaagc gggtcgcttt gagatcgccg atggctccac catctttctt
     2041 gatgaacttg gtgacttgcc gcttgagctg caaccaaagt tgctgcgtgt gctccaggag
     2101 ggtgagttcg agcgccttgg tggcacgcgg acgatcaaag tcgacgtgcg tgtgatcgca
     2161 gcgaccaacc gcgacctcgc tcgcgcggtc agcgaaggcc gctttcgtga agacctcttc
     2221 tatcgactta gcgtatttcc gatcgaaatc ccgccgctgc gcgagcgccg cgaggacatc
     2281 gcgctgctgg cgtggggctt cgtcaaagaa ttcagcaagt cgatgggcaa gacgatcgaa
     2341 cggattgccg atgagtcaat ggctgcgatg caggaatatc cctggccggg caatatccgc
     2401 gaacttcgaa atgtagtgga acgcgcaatg atccttgcgc gcgacacgac gctgcgtgtg
     2461 acgctccgtc ggtcctcgat cgagctgcct tccagcaata cgagcctagc aacacttgag
     2521 gattctgatc gggcccacat tctgaaagcg cttgagcgat ccggctggcg cattcgtggt
     2581 cctgaaggtg cagcggcgct gctcaatatc aagcccacca cacttgagtt ccggatcaaa
     2641 aagctgggcc tcat
//
LOCUS       DATILV010000338         6072 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3656710, whole genome shotgun sequence.
ACCESSION   DATILV010000338 DATILV010000000
VERSION     DATILV010000338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6072
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3656710"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..383)
                     /locus_tag="VLJ17_07635"
     CDS             complement(<1..383)
                     /locus_tag="VLJ17_07635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="FAA hydrolase family protein"
                     /protein_id="HSV22884.1"
                     /translation="MKLCRYDDNRIGLVRGRNVHDVSDILETLPQLRYPVPFGDQLIA
                     HLAALREHMEELADDAAPRPVEAVRFLSPVANPSKIIGTPVNYLAHVEEARHDPQISV
                     FHGGQQRTIEEQGLFLKASSSLVGAS"
     gene            604..1002
                     /locus_tag="VLJ17_07640"
     CDS             604..1002
                     /locus_tag="VLJ17_07640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018321612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV22885.1"
                     /translation="MARILVIDDDQPVRTAIKTLLEIQGHEVAIANDGREGLKTLETA
                     HFDVLMVDMFMPGMDGFETIDLVRRRNLELPIIMMSGLAAPPDPKDRATQLGAVRRLW
                     KPFRPADLSAAIDDCLRGRINGEPAVAAPQ"
     gene            1114..3927
                     /locus_tag="VLJ17_07645"
     CDS             1114..3927
                     /locus_tag="VLJ17_07645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV22886.1"
                     /translation="MRLSTRLAIAMVGLVLFTAVAVVVLSYRNLEAEIVPRALEVIEG
                     RTRLLAGKFAEHTQRAVDDLPGLRAAAALSGILRARESGGFDPVDGVTEETWRQRMAD
                     QYAAELAAKPAYYKIRVIGVEDGGREIVRVDRSGAAGTIHVAPDSELQHKGDREFFTA
                     AIGLRAGEIAISPIELNQENGVIEIPHVPVLRTSTPIYTPDSKLFGILVINLDMRPIF
                     EQVRSGGRLGAKTYVVDSRGNYLVHPDRSREFGFEFEMPFRWQDEFPDFVRVLGPDRI
                     NLASTETIVSASTDAIYSGGESCGTAISWVRLATGAMSPRVGVLQVLPNAVMMEPAAA
                     VRRSGVVVGLVSVLWAGALALLLTRSLTTPLAQITVAVEGLAHDRVTALPTDAGGEIG
                     VLARVFAKMAGEVRDKTVLLEREVDERRRVAEVLNNTFSSMQDAVIMIDKNGKVMLSN
                     PAAMRLGVTPGVTPQTWQSAYEILSTDGETPIPLDQWPLIRASQGEIIKDCEIIMRSR
                     KDGKSITLVGNGGAIQSGTAKGAVMVFRDITESKETARQLLQAQKMDAIGQLTGGVAH
                     DFNNMLTVITGTIEILATAVADHPQFAAIAKMIDEAAQRGAAMTQHLLAFARKQPLQP
                     RTTDINALVIDAVKLLRPTLGDQVAIETMLEEDAYPALVDPNQLVTALINLALNSRDA
                     MPSGGKLTLETGNVLVDESYARMHQGMAIGPHVMIAVSDSGSGIAPENREKVFEPFFT
                     TKGTKGTGLGLSMVYGFVKQSGGHVDIYSEEGHGTTIKIYFPHAVASTPPSADPVPAA
                     PIVGGHEAILIVEDDAMVRGYVATQVQSLGYRTIAAGNSAEALAIINGDAEVNLLFTD
                     VIMPAPMNGRQLADAALKLRPSLKVLFTSGYTKDAITHHGRLDPGVLLLTKPYRRSDL
                     ARMIRVALETAPAGTQESTADAP"
     gene            3972..>6072
                     /locus_tag="VLJ17_07650"
     CDS             3972..>6072
                     /locus_tag="VLJ17_07650"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HSV22887.1"
                     /translation="MKLSTRLAIAMVGLVMFTALAVGLLTYRNLQAEIVPRTLEEIEA
                     RVRLLADLLEERAQLAADDLPGFRSAVALEGILRARLSGGIDPLDGTTEETWRRRMAA
                     RFAAELAAKPHYYQFRIIGVDDGGREIVRVDRASDHGTIRVVPDSELQRKGDTAYFKE
                     AIRLGAGEIYFSPIELNREYGAIETAKVPVLHVATPIYFPDSTLFGILIINLDMRPVF
                     SQVRAGNPAGNKVYVIDGRGNYLVHPNRRQEFAFEFGSPVRWQDEFPDLARTLGPDRV
                     NFESTETTDSNRERVGAGIAWIRFTGGSTVGVLEIVPNDVMMALAASVRLSGIIVGLV
                     SVLWAGALAVLLARSLTTPLAQVTQAVEGLAHDRITALPTDAGGEIGALARAFGTMVA
                     EVRDKTILLEREVDQRRHVAEVLNNTISSMQDAVILTDKNLHVTLSNPAALRVMGVTP
                     GFTPQNWAQNYELLSPDGEAPIPLDQGPMMRAVRGEIVKDCEIIVRSRKNGKSVSLVA
                     NGGPIQFGTANGAIMVYHDATESRETARQLLQAQKMEAVGQLTGGIAHDFNNILTVIT
                     GTIEILAAAVADRPQLAAIAKMIDEAALQGAALTQHLLAFARKQPLQPRITDINALII
                     NAAKLLRPTLGEQIEIETMLEEDAYPALVDANQLVTALINLALNARDAMPGGGKLTLE
                     TGNVYLDEGYAKIHHEVA"
BASE COUNT         1294 a         1756 c         1831 g         1191 t
ORIGIN      
        1 gaggctccga ccaacgagct cgacgccttc aggaatagcc cctgctcctc gatcgtgcgc
       61 tgctggccgc cgtgaaagac cgatatttgc ggatcatggc gcgcctcttc gacatgcgcc
      121 agatagttca cgggcgtccc gataatcttc gagggattgg caacgggact caagaatcgc
      181 accgcttcga ccggtcgcgg cgcggcgtcg tcggcgagtt cttccatgtg ctcgcgcagc
      241 gctgcgaggt gcgcgatcag ttggtccccg aacggcaccg ggtatcgcag ctgcggcaat
      301 gtttcgagaa tgtccgacac gtcatggacg ttgcggccgc gaaccaagcc gatcctgttg
      361 tcgtcgtagc ggcagagctt catcggaggg attgccttgt ggattagggg agcggctcaa
      421 gagatattcg atatgcgtcg atcattccgg tcgccgccgt caagatcgca tggagcgaaa
      481 atcgctgcac gccagccacc cgcctccaaa caccccaagg cgaaaatttg aaaaagtggt
      541 tattttcggg gcactcctat ggtagtatga tgatgacaag gacgccactc cggggaatga
      601 tccatggccc gtattctggt gatcgatgac gatcagccgg tacgaacggc gatcaagacg
      661 ttgctggaaa tccaaggaca cgaggtagcc attgcaaatg atggtcgcga aggcctcaag
      721 actctggaga ccgcgcattt cgatgtgctg atggtcgata tgttcatgcc cgggatggat
      781 gggttcgaaa ccatcgatct ggtccgcagg cgcaatctgg aactccccat catcatgatg
      841 tcgggattgg ccgcgccacc cgaccctaaa gaccgtgcca cgcaactcgg cgccgttcgc
      901 aggctctgga agccgttccg gccagccgat ctgtcggcgg cgatcgacga ctgtctgcgc
      961 ggcagaatta acggcgaacc agcagtcgcc gcgccccaat agcgcggcag atgacgcttc
     1021 agacgaggtc ggcatgaact ggggccaagg ggagtggaac caggttgccc gccggccggt
     1081 cagccttact gaatgacgaa ccggacggcg ccgatgagat tatcgactcg cctggcaatc
     1141 gcgatggtcg gactggtgct gttcaccgct gtcgcggtcg ttgtactgag ctatcgaaac
     1201 ctggaagccg aaattgtacc gcgcgcgctg gaggtgattg aaggccgcac acgtctcctg
     1261 gccggcaaat tcgcagaaca cactcaacgt gcggttgacg atcttcccgg attgcgcgcg
     1321 gcggctgcgc ttagtggaat attgcgggca agagaatccg gcggcttcga tccggttgac
     1381 ggcgtgactg aagagacatg gcgccagcgc atggcggacc aatatgcggc ggaacttgcg
     1441 gccaagcccg cttactacaa gatccgcgtt atcggtgtcg aagatggcgg gcgcgagatc
     1501 gtgcgggtcg atcggtcggg cgcggccggc acaattcacg tcgccccgga ttctgagctg
     1561 cagcacaagg gcgaccgtga atttttcact gcggcgatcg gtcttcgcgc cggtgaaatc
     1621 gccatctcgc cgatcgagct caatcaggaa aatggcgtca tcgaaatccc gcatgtgccg
     1681 gtgctgcgaa cgtccacgcc tatatatact ccggattcga aattattcgg aattcttgtc
     1741 atcaatctcg acatgcgtcc gatctttgag caggttcgat ccggtggtcg gctcggtgcc
     1801 aagacctacg tcgtcgacag ccgcggcaac tatttggttc atcccgatcg cagccgggaa
     1861 ttcggttttg aattcgagat gccgtttcgc tggcaagacg agttcccgga ctttgttcgc
     1921 gtgttgggtc cggaccgcat caaccttgcg tcgacggaga cgatcgtctc tgcgtcaacc
     1981 gacgcaatct actccggggg ggagagttgc ggcaccgcca tttcctgggt acggctcgcc
     2041 accggagcaa tgagcccaag agtcggcgtg ctccaggtct tgcccaacgc cgtcatgatg
     2101 gagccggcag ccgcggtccg gcgctcaggc gtcgtcgtcg gtttggtttc cgtgttgtgg
     2161 gccggcgcgc tcgcgctcct tctcacccgt tcgctgacga cgccgctggc gcagataaca
     2221 gtggctgtcg agggtctcgc tcatgatcgc gtcaccgcgt taccgactga tgctggcgga
     2281 gagatcggcg tgctggcccg tgtcttcgcc aagatggctg gggaggtaag ggacaaaacg
     2341 gtattgctgg agcgcgaagt ggatgagcgg cggcgtgtcg ccgaagtgct gaacaatacg
     2401 ttttcaagca tgcaggacgc ggtgatcatg atcgataaga acggaaaggt catgttgtcg
     2461 aatccggcgg caatgcggct gggggttacg ccaggtgtca cgcctcagac gtggcaatca
     2521 gcgtatgaaa tactcagcac cgatggagaa acaccgatac cgctcgatca gtggccattg
     2581 atccgtgcct cacaaggcga aatcatcaag gactgcgaaa tcatcatgcg cagccggaaa
     2641 gacgggaaat cgatcacact tgttggcaac ggcggggcca tccaatccgg cactgccaag
     2701 ggcgccgtca tggtgttccg cgacataacg gaatcgaagg aaacggcgcg tcagttgctt
     2761 caggcccaga agatggatgc gatcggccaa ctgacgggcg gagtcgcgca cgatttcaac
     2821 aatatgctca cggtgatcac cgggacaatt gagatcctgg cgacggccgt ggccgaccac
     2881 ccgcaatttg ccgcgatcgc caagatgatc gacgaagccg cccaacgcgg cgcggcaatg
     2941 acgcagcatc tgcttgcctt cgcccgcaag cagccgctgc agccacgcac caccgacatc
     3001 aacgcactgg tcattgacgc cgtgaagctg ctgcggccaa cccttggtga ccaggtcgcg
     3061 attgaaacga tgttggagga ggacgcctat ccggcactgg tcgatcccaa ccaactggtg
     3121 accgccctaa tcaatctcgc actaaattcc cgcgatgcca tgccgtccgg cggcaagctt
     3181 acattggaga ccggcaacgt cctcgtcgac gaaagctatg ccaggatgca ccagggcatg
     3241 gcgattggtc ctcatgtgat gattgccgtg agtgattcgg gcagcggcat cgcgcccgag
     3301 aatcgcgaga aggtcttcga gccgtttttc actacgaaag gcaccaaggg gaccggtctc
     3361 ggcctcagca tggtctacgg cttcgtcaag caatccggtg gacacgtcga tatctacagc
     3421 gaggagggtc atggaacgac gatcaagatt tactttccgc atgcggtcgc cagcaccccg
     3481 ccgtcagccg atccggtgcc ggccgcgcca attgttggtg gccatgaggc cattttgatt
     3541 gttgaggacg atgccatggt acgcggctat gtagccaccc aagtgcagag cctcggctac
     3601 aggacgatcg ccgctggcaa cagtgccgag gcgctcgcca tcatcaatgg cgacgcggag
     3661 gtgaacctcc tgttcaccga cgtgatcatg ccggctccga tgaacgggcg tcaactcgcc
     3721 gacgcggctc taaagctccg gccgtccctt aaggtcctgt tcacctcggg ctatacgaaa
     3781 gacgcaatca ctcaccatgg ccgcctcgac cccggcgtcc tgcttctcac caaaccgtat
     3841 cgaaggtcgg atttagcaag aatgatccgt gtcgcacttg agaccgcgcc ggctggaacg
     3901 caggaaagca ctgcggatgc accttgatcg ccatctttga ggcctgatga tcgacaacct
     3961 ggaaagcact gatgaaatta tcaactcgct tggcaattgc gatggtcggg ctggtgatgt
     4021 ttacggctct cgcagtcggt ttgctgacct atcgaaatct ccaagccgaa attgtaccac
     4081 gcacactgga ggagatcgaa gcccgcgtgc gtctcttggc cgaccttctc gaagaacgcg
     4141 ctcagcttgc ggccgatgat cttcccggct ttcgctcggc agttgcacta gaaggaatat
     4201 tgcgggcaag attatccggc ggtatcgacc cgctcgacgg aacgaccgaa gagacatggc
     4261 gccggcgcat ggccgcgcgg tttgccgcag agttggctgc caagccgcat tactatcagt
     4321 tccgcatcat tggagtcgac gacggtggac gcgagattgt cagggtcgat cgagcgagcg
     4381 atcacggaac aattcgcgtc gttccggact ctgaactgca gcgtaagggc gacaccgcat
     4441 atttcaagga ggcgattcgt cttggcgccg gcgaaatcta cttctctccg atcgagctta
     4501 atcgcgaata tggcgccatc gaaaccgcaa aggtgccggt gctgcacgta gcaacaccaa
     4561 tatactttcc cgattcaaca ctattcggga ttcttatcat aaatctcgac atgcgtccgg
     4621 tcttttcgca ggttcgcgcc ggcaatccgg ccggtaacaa agtgtacgtc attgacggcc
     4681 gcggcaacta tttggttcac ccgaatcgcc gccaggaatt cgcttttgaa ttcggctcgc
     4741 cagttcgctg gcaagacgag tttccagacc ttgctcgcac gcttggtccc gaccgcgtca
     4801 attttgaatc gaccgagact accgattcca atcgcgagcg tgtcggcgcc ggaattgcat
     4861 ggataaggtt caccggcgga tcaacagtcg gcgtgctgga gatcgtaccc aatgacgtga
     4921 tgatggcgct agcagcttcg gttcgacttt cgggcattat cgtcggtttg gtttctgtgt
     4981 tgtgggccgg ggcgctcgct gtactgttgg cacgttcgct gacgacgccg ctggcacaag
     5041 tgacacaggc cgttgagggg cttgctcatg atcgcatcac cgcgttaccg acagatgctg
     5101 gcggggagat cggcgcactg gcgcgtgctt tcgggacgat ggtcgcggag gtaagggaca
     5161 aaacgatctt gctggagcgc gaagtggacc agcgacgaca tgtcgccgaa gtgttgaaca
     5221 atactatctc gagcatgcag gacgcggtaa tcctgacaga caagaattta cacgttacct
     5281 tgtcgaatcc ggcggcgctg cgagtgatgg gggttacgcc aggcttcacg cctcagaatt
     5341 gggcacaaaa ctacgagctg ctcagccccg atggagaagc cccaatacct ctcgatcagg
     5401 ggccgatgat gcgcgccgta cgcggcgaaa tcgtcaagga ctgcgaaatc atcgtacgaa
     5461 gccggaaaaa cgggaaatcg gtcagccttg ttgccaacgg gggacctatt caattcggaa
     5521 ctgccaacgg cgccatcatg gtgtaccacg atgcaaccga atcgcgcgaa acggcacgtc
     5581 agttgcttca ggcgcagaag atggaagcag tcggccaact gaccggcggc atcgcacacg
     5641 atttcaacaa tatcctcacg gtaatcaccg ggacgattga gatcctggcc gcggccgtgg
     5701 ccgaccgccc gcaacttgcc gcgatcgcca agatgatcga cgaggcggcg ctacaaggcg
     5761 cagcattgac acaacatctg cttgccttcg cccgcaagca gccgctgcag ccgcgcatca
     5821 ccgacatcaa tgcgttgatc atcaacgccg ccaagctgct gcggccgacg ctcggcgagc
     5881 aaatcgagat tgaaacgatg ctggaggagg atgcgtatcc ggcgctggtc gatgccaatc
     5941 aactggtgac cgcgctgatc aatctcgcac taaacgcgcg cgacgccatg ccgggtggcg
     6001 gcaagcttac attggagacc ggcaatgtct atctcgatga aggctacgcc aagatccacc
     6061 acgaggtggc ga
//
LOCUS       DATILV010000339         3963 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1869367, whole genome shotgun sequence.
ACCESSION   DATILV010000339 DATILV010000000
VERSION     DATILV010000339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3963)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3963)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3963
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1869367"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(286..1545)
                     /locus_tag="VLJ17_07655"
     CDS             complement(286..1545)
                     /locus_tag="VLJ17_07655"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TCR/Tet family MFS transporter"
                     /protein_id="HSV22888.1"
                     /translation="MLRRRPLSVRPATTGFIFITVLLDMVAVGIMAPVLPKLIISFDQ
                     GNIARAASVVGVIGLIWAGMQFIFSPIVGALSDRYGRRPIILLSNLGLGLDYLIMALA
                     PSLPWLFVGRVLSGVAGASFSTAAAYIADVTPQEKRAGQIGLLGAAFGIGFVLGPAIG
                     GVLGELDLRLPFWVAAGLSLANATYGYFVLPESLSIEHRAKLKWEIANPLNTLKLLRS
                     YPRLAGLAAAAFLCFLGHEALHATFVLYTDYRYGWSANQVGLALSLVGIGSGIVAGLL
                     VRPAVARCGEHPVVLAGLIFGVVGFAAYAFAPTGALFLASTPVIALWALAGPAVQSSM
                     TRQVGPSEQGRLQGALSSLRGMAGLVGPLLFTQTFIVGISDGHRTPGVPYLVVAGLLI
                     FAIVAVKWLPRLDRRSPSSVCSALEES"
     gene            complement(1562..2791)
                     /gene="hemA"
                     /locus_tag="VLJ17_07660"
     CDS             complement(1562..2791)
                     /gene="hemA"
                     /locus_tag="VLJ17_07660"
                     /EC_number="2.3.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003870 - 5-aminolevulinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006783 - heme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-aminolevulinate synthase"
                     /protein_id="HSV22889.1"
                     /translation="MDYQAYFRLAIEALEAERRYRVFADLERIAGRFPNAHWHSPDGP
                     RDVVIWCSNDYLGMGQHPAVIAAMVEAATHMGTGAGGTRNISGTNHPLVELEHELADL
                     HGKEAALVFTSGYVSNEAGIATIARLIPGCLIFSDALNHNSMIAGVRLSGCEKRIFRH
                     NDVGHLEELLIAAGPDRPKLIVFESVYSMDGDVAPVRAICDLAERYGAMTYLDEVHAV
                     GMYGERGGGIAEREDVMARVDVVEGTLAKAFGCLGGYITGPADLIDAVRSYAPGFIFT
                     TALPPAICAAASAAIRHLKTSSWERTRHQQNVGRTKAVLSAAGLPVMPSSTHIVPLRV
                     GDPDKCKKASDLLLGEHGIYIQPINYPTVPRGSERLRITPTPYHDAALIDLLARALVE
                     VWSQLGLPVQKSAIAAE"
BASE COUNT          925 a         1150 c         1118 g          770 t
ORIGIN      
        1 tattctcgcc cccggcgatt tgaggattag cgggaataag gcggccttgg agttcgcgtt
       61 ttgcggataa tggaacttgc cacagcaaat gcatggctca gggtgtatga cgtaacgcgg
      121 tgtcgaaaaa ggcatcgccg aagtaggtcc aatcgtttcc gctttttgca accgaacgat
      181 atgtgatctt cggaggctga tcatccacac cgtgtgactg tcggctggcg gcgaagcgta
      241 tcgcgcagca aatacagcta acgataacga aaatcagcgc cggtcctagc tctcttcaag
      301 ggcggaacac acgctggaag gagagcgacg gtccagtcta ggcagccatt tcaccgcgac
      361 aatcgcaaaa attaacagac cagcgacaac aaggtaaggc acgccgggtg ttcgatgacc
      421 gtcgcttatt ccgacaatga aggtttgagt aaacagaagc ggccccacca ggcccgccat
      481 gccacgcaag ctgctgagag cgccctgcag tcggccctgc tcagacggtc caacttggcg
      541 cgtcattgag gattgtaccg ccggcccagc aagggcccat aatgcgatga cgggggtgct
      601 ggccaggaat agcgctcccg tgggagcaaa tgcataagcg gcgaagccga ctacgccaaa
      661 gatgagtcct gcaaggacaa ccggatgctc tccgcaacgt gccaccgccg gtcggacaag
      721 tagtcctgcc actatccccg aaccgattcc taccagcgag agagccaatc cgacttggtt
      781 cgcgctccag ccatagcggt aatccgtgta aagcacaaag gtcgcgtgaa gagcttcgtg
      841 tcccaaaaag caaaggaagg ccgctgcggc aagaccggcg agtcgcgggt atgaacgcag
      901 cagcttgagc gtgttcaaag ggttcgcgat ttcccacttg agcttggctc gatgctcaat
      961 tgacaaagat tccgggagca cgaagtaccc gtatgttgca ttggccaaac tcaaacctgc
     1021 agcaacccag aacggcagcc gcaagtccag ttcaccaagc acgccgccga ttgcggggcc
     1081 gaggacgaat ccgataccga atgctgcgcc aagcaaacca atttgaccgg cgcgtttctc
     1141 ttgaggtgtc acgtctgcga tgtaagctgc cgctgtcgaa aaactcgccc cggcaacgcc
     1201 tgagagcacc cggccgacaa aaagccaggg caacgacggc gcaagtgcca tgatcaagta
     1261 gtcgagaccc aggcccaaat tagagagcag aattatcggc cgccgaccgt atcggtccga
     1321 caaagcgccc acgataggcg agaagatgaa ctgcatccca gcccatataa ggccaataac
     1381 gcctacaact gatgctgcac gcgcaatgtt accttggtcg aatgaaatga tcagtttggg
     1441 caggacggga gccatgatcc cgaccgcaac catgtcaaga agtaccgtta taaagatgaa
     1501 gccggtcgtt gccgggcgta ctgacaaggg ccttcgcctg agcatttgga ctcctcgtct
     1561 gctactcggc tgctatcgcg cttttttgga ctggaagccc gagttgcgac cacacctcca
     1621 ccaatgctct tgccaaaaga tcgatcagag cagcgtcatg gtacggcgta ggcgtgatcc
     1681 gaaggcgctc cgagccacgc ggcacggtcg ggtaattgat cggctgaatg tatattccgt
     1741 gttcgcccag caagaggtcg ctcgcttttt tgcacttgtc ggggtcacca acccgcaaag
     1801 gcacgatgtg cgttgaactg ggcatgaccg gcagccccgc cgcgctgagc acagctttgg
     1861 tgcggccgac attctgttgg tgacgcgtcc gctcccagct tgacgtcttc aggtgcctga
     1921 tcgcagccga cgcagcagcg cagatcgctg gcgggagagc cgtcgtgaag ataaagcccg
     1981 gcgcatagga gcgcacggcg tcgatgagat cggcggggcc ggtgatgtag cccccgagac
     2041 acccgaaggc cttcgccagc gtgccctcaa caacgtcgac gcgtgccatc acgtcctcgc
     2101 gctcggcaat gccgcccccg cgttccccat acatgcctac agcgtggacc tcgtcgaggt
     2161 aggtcattgc gccgtatcgt tccgcgagat cgcagattgc gcgaacggga gcgacatcgc
     2221 catccatgga gtacacgctc tcgaacacga tgagcttcgg ccggtcggga cctgccgcaa
     2281 tcagcagctc ctccaggtgc ccgacatcgt tatggcggaa aatgcgtttc tcgcagcctg
     2341 ataggcgcac gccggcgatc atggaattgt gattgagcgc gtcggaaaaa atcagacagc
     2401 cgggtatgag cctggcgatg gtcgcaatgc cggcctcgtt ggagacatag ccggacgtga
     2461 aaacgagagc ggcttccttt ccgtgcagat ccgcgagctc gtgctccagc tctaccagag
     2521 gatgatttgt cccggaaatg ttccgggtgc cgcccgcgcc ggtgcccatg tgggtggcgg
     2581 cttcaaccat agctgcgatc actgctgggt gttgccccat accgagatag tcattggagc
     2641 accagatcac gacatcacgt ggcccgtccg gcgaatgcca atgagcgttc ggaaaccgcc
     2701 ctgctatgcg ctccagatcg gcgaacaccc gatatcggcg ctcagcctcg agcgcttcaa
     2761 tggcaagcct gaagtatgct tgatagtcca cgacggccct ccagttagac gcccgacgca
     2821 accagtagtt gatggttgtt ttatttagaa taacaagaat ctgaccgtac agcaaacata
     2881 ataccatcag ggtggcggct tcgcatctaa catcggcgtc ccaaggctcg gggccggtcg
     2941 atcaagaacc gagcggcagt cttcgctgaa ccacctcgcg gctcggcgat cagccaggag
     3001 cagcccagat gtcaggctag ggtcgatgct gtcgcaaaag tccgcggcat ccggcggacg
     3061 cgcaacaatc aaatcatcgg agtcgattct ttgaatcgaa ctcgtgcttt cgatgctcgt
     3121 tttgaatcaa tattgctaag agatccccaa aatcttttcg acagcatcgg tcatgggctc
     3181 caggactact tttgcatcac ggccgtgcgc cccagatagc tcccgacttt ccctcctcca
     3241 cccgagttgg cagcatcacc ctctttgcgc aaaaacttat ggtgccctta caaagcacgc
     3301 tttcgccgat caacgcggcg gagatttgct gatcatcaga tggcgcgacc tcatcttatg
     3361 cggggtaatg gcagttaagg tcatcttcaa ccgtcgcgac gcagtgccaa caacggtggg
     3421 ccttcggtag cggaaagcgc aagggccaaa aagcgaggca tagagatgga aaatgtcgtc
     3481 gaagagttta gggaaagcca aaggacgtta ttactgaacg attccaccaa aaacttgcac
     3541 aagatcattc ctgcgttcgc aataggagtc ggaagatgca tatgcccggc aactgagacc
     3601 cgcaggcggc gggtaaattt gtaaaggata cacgaacaca ggagagattt gttgtgggta
     3661 gatccgctgc tgctcatgat cgtcgcgtgg gacaaagaga cgggttgtct gtctgacagc
     3721 gctagaggtt tcctgcctgg caccgccagt ggctgactac ccagctgcgc cagccgttcc
     3781 ctgccgaccg tcgcctgcgg caggatccaa gatcggtccg gcgcttttct gcattcgact
     3841 gcaatcttgc ccatcacatt tttgagctga ggtactgatc ggtgcatata acgcagcaat
     3901 cacgccagcg ataaccttgt tcaccaacgt cctccataga tcaccgtgac atcaaatctt
     3961 ctt
//
LOCUS       DATILV010000340         5983 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1100487, whole genome shotgun sequence.
ACCESSION   DATILV010000340 DATILV010000000
VERSION     DATILV010000340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5983)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5983)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5983
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1100487"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..495
                     /locus_tag="VLJ17_07665"
     CDS             <1..495
                     /locus_tag="VLJ17_07665"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003610318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HSV22890.1"
                     /translation="GEIETKTFPKRIAFNLIPQIDVFMEDGFTKEEWKMVVETKKILD
                     PKIKLVATCVRVPVFIGHSEAVNIEFERPISADEARAILREAPGCLVIDKLEPGGYVS
                     PYECVGEDATYISRVREDPTVDNGLVLWCVSDNLRKGAALNAIQIAECLINRKLISAK
                     QKAA"
     gene            complement(500..1231)
                     /locus_tag="VLJ17_07670"
     CDS             complement(500..1231)
                     /locus_tag="VLJ17_07670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013528989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF429 domain-containing protein"
                     /protein_id="HSV22891.1"
                     /translation="MPTQWLAGVDGCRAGWIAAFVGSNHGDVRIRVLSRFAEVLAAPE
                     QPRVVAVDMPIGLPARIGPQGRGPERAVRPLLGDRQSSVFSVPSRRAVYAKDYGEACH
                     LALQTSDPPKKVSKQLFLIAPKIREVDEALRKASALTDRVFEVHPEVAFWRLNGDRAL
                     TEPKKIKGQPHGPGLMLRRSLLIANGFSAAAVEGRPPHGAAADDLLDALACAAIARRL
                     DAGVAVPFPDPPLCDQYGLPVAIWA"
     gene            1338..2216
                     /locus_tag="VLJ17_07675"
     CDS             1338..2216
                     /locus_tag="VLJ17_07675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HSV22892.1"
                     /translation="MTIRPRRSVLYMPGANARALEKAKTLACDAVILDLEDAVAPSAK
                     VTAREQVMTAVKDGGFGAREVIVRINGLDTAWWLDDLAAVAKARPDGILVPKVSQPAH
                     LATIAERLIDIAADHKMRVWAMIETPLAIINAAEIAAMARDVETRLAGFVMGTNDLAK
                     ESRAKLLHDRAPMVPWLATAVLAAHAFGIDILDGVYNDIADEEGFRRECGQGRDMGFD
                     GKTLIHPNQIAPCNSAFSPSEADIAQARKIIAAFELPENLAKGVVQLDGRMVERMHAD
                     IARRTVAIADAIAARS"
     gene            complement(2699..3304)
                     /gene="leuD"
                     /locus_tag="VLJ17_07680"
     CDS             complement(2699..3304)
                     /gene="leuD"
                     /locus_tag="VLJ17_07680"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HSV22893.1"
                     /translation="MEKFTVLEGVAAPLKSINVDTDAIIPKQYLKTIKRTGLGKGLFS
                     EKRYRDDGSENPDFVLNKSAYRSAKILVAGDNFGCGSSREHAPWALLDFGITCVISTS
                     FGDIFYNNCFKNGVLPIKVSPEDLEKLFDDAERGANARLTIDLEKQEIRGPDGGVIKF
                     EVDPHRKHCLLNGLDDIGLTLVKKDKIASFEEKARAARRWA"
     gene            complement(3507..4187)
                     /locus_tag="VLJ17_07685"
     CDS             complement(3507..4187)
                     /locus_tag="VLJ17_07685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HSV22894.1"
                     /translation="MNVITFASRKGGVGKSTLTAHISAFAHMSGRRCSVIDADPQGSL
                     TLWHSMRPNRELPLQSAAQGIDRLVASAQLDGVEWVFIDTAPTTWVVVQEAIRVATMV
                     VIPVRPGFFDVAAVQDTVKIARERNKPYAVVINAAPVKRERKEAPAVALTRAEFDRLS
                     VPVWSGQISQRTALLGSLAAGASAGELHGDPACRIEIAGLWSAIERSVAAINSAYAAS
                     AKLQGKAA"
     gene            complement(4356..5723)
                     /locus_tag="VLJ17_07690"
     CDS             complement(4356..5723)
                     /locus_tag="VLJ17_07690"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HSV22895.1"
                     /translation="MRRKFSARDVSASWSPTGRRDIFAIATAEFRGAKREDDPMKRRE
                     FITLVGGAAALPFVANAQQPQSSSAIPQSSSAIDDAMRRAVERKDVAGVVVMAADRKR
                     VIYQGAFGVADIGEARPLRLDALFRIASMTKAITSTAAIQLVEQGRFAIEDPVEKYLP
                     EFAKLSVFESFDGATGAYRLRPATKAVTIRHLFTHTSGLGYGFTNPTVRDFKPRAGEE
                     YAVGPLVFEPGERWLYSTSTDWLGRLVEKVSNLSLEDYFRQRIFTPLGMADTFYFVPK
                     DKEARLVTVNRRIADGSIVRESVQPPTSGFTPIGGGGLSSTANDYIRFTRALLNGGEL
                     DGARILSAGTVALMGQNHIGALGVPAQKTAIPERSDDFSFIADGRDKWGLGFLITADD
                     IPGKRSAGSLSWGGINNTYYWLDPTRGITGVILMQFLPFADRKALALYDAFERGVYQL
                     ADASR"
BASE COUNT         1227 a         1794 c         1835 g         1127 t
ORIGIN      
        1 ggtgagatcg agaccaaaac gtttcccaag cgcatcgcct tcaacctgat cccccagatc
       61 gacgtcttta tggaggacgg cttcaccaag gaagaatgga agatggtggt cgagaccaag
      121 aaaattctcg acccgaagat caagctggtc gctacctgcg tgcgggtgcc ggtgttcata
      181 ggccattcgg aagcggtcaa tatcgagttc gaaaggccga tctcggctga cgaggcgcgg
      241 gccatcctgc gcgaggcacc gggttgcctg gtcatcgaca aactcgagcc gggcggctac
      301 gtcagccctt acgaatgcgt tggcgaggac gccacctata tcagccgcgt gcgcgaagat
      361 cccacggtcg acaacgggct ggttctgtgg tgcgtatccg acaacctgcg caagggtgcg
      421 gccctcaatg caattcagat tgccgagtgc ctgatcaatc gtaagctgat tagcgccaag
      481 cagaaggcag cgtaagccct tacgcccaga ttgccaccgg caagccgtat tgatcgcaca
      541 gcggcggatc ggggaacggc acggctacgc ccgcatcgag acggcgcgcg atcgccgcgc
      601 aggccagtgc atcgagaagg tcatctgcgg ccgcgccgtg gggcggcctt ccttccaccg
      661 cggccgcgga aaatccattg gcgatgagca ggcttcgccg caacatgaga cccggaccat
      721 ggggctgtcc tttgattttc ttcggttccg tcagcgcccg gtcgccattg agccgccaga
      781 acgcaacttc cggatgaact tcgaagacgc ggtcggtcag tgccgaagcc ttgcgcagcg
      841 cctcatcgac ctcgcggatt tttggcgcga tcaaaaaaag ctgcttggaa accttttttg
      901 gcgggtcgga tgtttgcagc gccaaatggc aggcctcgcc ataatccttg gcataaacag
      961 cccggcgcga tggcaccgag aaaaccgacg attgccgatc acccagaagc ggcctcacgg
     1021 cgcgttccgg ccctcgcccc tgcggtccga tgcgcgccgg cagcccgatc ggcatgtcga
     1081 ccgcgacaac gcggggttgc tcaggtgcgg ccaagacttc cgcaaaccgg gagagaacgc
     1141 gaatccgaac gtcgccgtgg ttggaaccga cgaacgccgc aatccatccg gccctgcagc
     1201 cgtcaactcc ggccagccat tgcgtcggca tgatgctttc gaagtcctgt cgttggcgaa
     1261 agattggtgc gtgtcctgct tacctcgggg gctggagtga ctgaaagccg gaacgtagac
     1321 acgcggaggc cgcgcccatg accattcgcc cacgccgtag cgtgctctac atgccgggtg
     1381 ccaatgcgag ggccctggaa aaggccaaga ccctggcctg cgacgccgtc attctggatc
     1441 tggaggacgc agttgcgccc agtgccaagg taacggcgcg cgagcaggtg atgacggcag
     1501 tgaaagacgg aggattcggc gcacgcgaag tgattgtgcg tatcaacggt ctcgatacgg
     1561 cttggtggct cgacgacctt gcggcagtcg ccaaggctcg tccggatggc atcctggtgc
     1621 caaaagtatc gcagcccgcc catctcgcga ccatcgcgga gcgcttgatc gatattgcgg
     1681 ccgatcacaa aatgcgggtg tgggctatga tcgaaacgcc gctcgcgatc atcaatgcgg
     1741 ccgaaatcgc cgccatggcg cgcgacgtgg aaacgcgtct tgccggtttt gtgatgggta
     1801 ccaatgatct cgccaaggag agccgtgcca agctgcttca cgaccgcgcc cccatggtac
     1861 catggcttgc gaccgccgtt ctggccgccc atgcgttcgg gatcgatatt ctagacggtg
     1921 tctacaacga cattgcggac gaggaagggt tccgccgcga atgcggccag ggccgcgaca
     1981 tgggcttcga tggcaagacg ctcattcatc ctaatcaaat tgcgccctgc aattcagcgt
     2041 tttcaccgag cgaggccgat attgcccagg cgcgcaagat cattgcggca ttcgaattgc
     2101 cggagaatct tgccaagggc gtcgtccagc tggacggccg catggtcgaa cgcatgcatg
     2161 ccgacatcgc gcggcgcacg gtcgcgatcg cagacgccat cgcggcgcgg tcgtgagagg
     2221 tggcgagggt taggcgtgtt ctgagcgggc gcatagaagg tcccctcgac ttcaaagatg
     2281 tcgtcctggt cgatgaattt ccacgatggg gcacggcgga taagggcccc cacaattcct
     2341 cctggatctt gttaggcaat cggacagaac cgaaacgtgt cggtgacata ggcgacgatc
     2401 agcacgcaat cctgcagtgt tgcgccctgc aagttccgcg atcaacttca tgttgagaaa
     2461 ggcttggcgt attcgggctt catcgccttg gacgagcgca tgcctgcgat atagatgaaa
     2521 tcgctagccc gcgcagcgag gtcggaaagt tccgatcgac ttgacttgat agcacctgca
     2581 ggagaaagcg tcccgcattg gggggataac gactgcgcaa cggatgcatt taagaccgcg
     2641 agggctccga ttgcgctgag cgtgaagctc aacatgtcgc cctgcggtct cgttgcagct
     2701 atgcccaacg ccgcgccgcc cgggcctttt cctcgaagct ggcgatcttg tcctttttga
     2761 cgagtgtgag cccgatgtcg tcaaggccgt taagcagaca gtgcttgcgg tgtgggtcga
     2821 cctcgaactt gatcacgccg ccgtcgggac cacgtatctc ctgcttttcg aggtcgatgg
     2881 tgaggcgggc gttggcaccg cgctcggcat cgtcgaacag cttttccaaa tcctccgggc
     2941 tgaccttgat gggtagaacg ccgttcttga aacaattgtt gtaaaaaatg tcgccgaacg
     3001 aggtcgaaat cacgcaagtg ataccgaaat ccaacagcgc ccacggcgca tgctcgcggg
     3061 acgagccgca accgaaatta tcgcccgcaa caagaatttt ggcgctgcga taggccgatt
     3121 tgttgagcac gaaatctgga ttctcactgc cgtcgtcgcg gtagcgcttc tctgagaata
     3181 atcccttgcc tagaccggtt ctcttgatgg tcttgagata ctgtttgggg atgatggcgt
     3241 cggtgtcgac attgatcgac ttcaggggcg ccgcgacccc ctccagaacc gtgaatttct
     3301 ccataggtca tctcccaatg tcgccggatg cgcacgggcg ggctgcgaac atgtcggcaa
     3361 caacgcgcca ccgaaaaagt gcctcaaaat gatctcggcg gtatggagat gaacgcggaa
     3421 tgcggatcgg tcaagtgccg gcggagagtt ccggaacgtc gctgtaccgg aagtggctcg
     3481 ccggaaagcc cgctttgatt tttccgtcag gctgctttgc cttgaagttt agcgctggct
     3541 gcgtaggcgc tattgatcgc cgcgaccgag cgttcgattg cggaccacag cccagcaatc
     3601 tcgatccggc aggctggatc gccatgtaac tcgcccgcgc tggcacccgc ggcaagcgaa
     3661 cctaacagcg ccgtacgctg gctgatctgg cccgaccaca ccggaacgga tagccggtcg
     3721 aattcggcac gcgtcaatgc gaccgctggc gcttccttcc gctcgcgttt gacaggcgcc
     3781 gcgttgatca ccaccgcgta cggtttgttg cgctcccggg cgatcttgac ggtatcctgc
     3841 acggccgcaa catcgaaaaa tcccgggcgc accggaatga ccaccatcgt ggcaactcgg
     3901 atcgcctctt gcaccacgac ccatgttgtc ggcgccgtgt cgatgaacac ccactcgact
     3961 ccgtcgagct gcgcggaggc cacgaggcga tcgatccctt gagcagcgct ctgcagcggc
     4021 aactcgcgat tggggcgcat tgagtgccaa agcgtcagcg aaccctgcgg gtcggcatcg
     4081 atgacggagc agcgacgccc cgacatgtgg gcgaaggcgg agatatgcgc cgtcaaggta
     4141 ctcttgccta cgccgccctt gcgtgaagca aaagtgatca cattcatctg gccatccccc
     4201 cgctgggtga tttcggcaag tttagtttaa tatagttaac caagtgtaaa tggcgcaggc
     4261 gcgagaaccc tcccgtagtg ccaaaagtat gcgtaggacc cgtcgcgggg gcggcggcgc
     4321 caccgcgaca aggagtacaa acgcagcgga tcgacttagc ggctcgcgtc agcgagttga
     4381 tagacgcccc gttcgaaggc atcgtagagg gcaagcgcct tgcggtccgc aaacggcagg
     4441 aactgcatca ggatcacgcc agtaatgcct cgggtcggat cgagccaata gtaggtgttg
     4501 ttgattccgc cccaactcag gctgccggca gaccttttgc cgggaatgtc gtcggctgtg
     4561 atcaagaatc cgagccccca tttgtcgcgc ccgtcggcaa tgaacgagaa gtcgtcactg
     4621 cgctccggaa tagcggtctt ctgcgccgga acaccaagcg ccccgatatg gttctgcccc
     4681 atcagcgcga ccgtcccggc tgacaagatg cgggcaccat caagttcccc gccgttgagc
     4741 agcgcccggg tgaagcggat gtagtcgttg gcggtcgacg acaggccgcc gccgccaatg
     4801 ggtgtaaagc ccgatgtcgg cggctgcaca gattccctga cgatcgaacc gtcggctata
     4861 cgacggttga ccgtcaccaa gcgtgcctcc ttgtccttcg gcacgaagta aaacgtgtcg
     4921 gccatcccca gtggtgtgaa gatgcgttgg cggaaatagt cttcaagcga caggttcgac
     4981 accttctcga ccagccggcc caaccaatcc gtgctggtgc tgtagagcca tcgttcaccg
     5041 ggttcgaata ccagcgggcc aaccgcgtac tcctccccgg cgcgcggttt gaagtcgcga
     5101 actgtcgggt tagtgaaacc gtatccaagt cccgacgtat gggtaaagag gtgccggatg
     5161 gtgaccgcct tggtggccgg gcgcagccga taagcgccgg tggcaccgtc gaacgattca
     5221 aagacggaga gcttggcgaa ttcggggaga tacttttcga ccgggtcttc gatcgcgaaa
     5281 cggccctgtt cgacgagctg aatggcagcg gtcgaggtga tcgccttggt catcgacgcg
     5341 atccggaaca atgcatccag ccgaagggga cgggcctcgc cgatgtcggc gacaccaaat
     5401 gcgccctgat agataacgcg cttgcgatcc gccgccatga cgacgacacc cgccacgtcc
     5461 ttacgctcga ctgcacgacg cattgcatca tcgatcgcgg aagaagactg ggggatcgcg
     5521 gaagaagact ggggctgttg tgcgttggcg acaaacggca aagcagccgc gccgccgaca
     5581 agggtgatga actcacgccg cttcattgga tcgtcctccc gcttggcgcc gcgaaactca
     5641 gcggtcgcga tggcgaagat atcacgacga cccgttgggc tccacgacgc cgatacatcg
     5701 cgcgccgaaa atttgcggcg cattgatgcc cactccgggc gcggtagttc aattgggatc
     5761 atgcccatgt atcaacgcga agcggtgccc actcttcctt gacgaacgac gctatatgtg
     5821 gacttcggcg agcgaggcgc accgaaatgt cagtggctgc gcgccttgcg gcgttatcac
     5881 caccggctcc ccgcacagga gatagcccgt ttccggcaaa tattgattcg gatgaatcac
     5941 gaacaccatg ccggccgcga gcgcaaggtc attgtcgagg ctg
//
LOCUS       DATILV010000341         3233 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2125451, whole genome shotgun sequence.
ACCESSION   DATILV010000341 DATILV010000000
VERSION     DATILV010000341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3233
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2125451"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..432
                     /locus_tag="VLJ17_07695"
     CDS             <1..432
                     /locus_tag="VLJ17_07695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012045837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-propeller fold lactonase family protein"
                     /protein_id="HSV22896.1"
                     /translation="PRFAAFTPDGTELWVSAEVGGTVSVIDPVKHVVEHRIEFAIPGM
                     RSDAIQPVGINITRDGKLAFVALGPANHVAVIDIKTHKILKYLLVGQRVWHMEFTPDE
                     KYLLTTNGLSNDVSVIDVANLKVVNTVQVGELPWGVTISDH"
     gene            572..1090
                     /locus_tag="VLJ17_07700"
     CDS             572..1090
                     /locus_tag="VLJ17_07700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018460287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22897.1"
                     /translation="MQPKVPELSAAAMWSGPSIADVGNSWQDDSKVRELVEMIAARRT
                     PLDTAQKAIADFMTGSPAEKERKAKVVFAGVFDTLGDQRREVMEGLERVSRKETDLAE
                     KIKSDVANLRELQDKPDADQSEVKNLASEIEWSTRIFEDRRKTIRYVCEVPTTIEQRV
                     FALARSIQQNLH"
     gene            complement(1094..1645)
                     /locus_tag="VLJ17_07705"
     CDS             complement(1094..1645)
                     /locus_tag="VLJ17_07705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012029057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent catabolism-associated CXXCW motif
                     protein"
                     /protein_id="HSV22898.1"
                     /translation="MSRGFVLGLWLVAFVVSASSQDSIPEPTGYRTQDYRAPTPTTLA
                     GARVLTTRDADELWKDGAAFVDVLPHPPRPTNLPPGTIWHENPHMNIPGSIWLPDTGY
                     GALASSTERYLRDGLARVTQRDQSRWLVVYCQKDCWMSWNAAKRALTMGYKNVAWYPD
                     GTDGWQASGLPVQKAEPAPTDGE"
     gene            complement(1642..2526)
                     /locus_tag="VLJ17_07710"
     CDS             complement(1642..2526)
                     /locus_tag="VLJ17_07710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HSV22899.1"
                     /translation="MRSAVALRLLVSSACCALGTVLAPISTYGQAGGVLQGDLELIDP
                     KVLRVCADPNNLPFSNDKGEGFENKIAELFATKLGKSLAYTYYPGATGFVRMTLGSYR
                     CDVVMGFPQGGELAQSTNPYYRTAYALVSKTSSPIAGVETLQDARLKDKHIGVVAGTP
                     PASYLVSDGLIANSKSYPLVVDTRYDSSAQAMVNDINSGEIDAGVLWGPLAGYYASHA
                     ASAMKTTLLLKEKGGPHLDYRIVMGVRPSDQNWKRQLNELIAENQPAINKLLLDFGIP
                     IVNESDQFITSNDLTQKP"
     gene            complement(2542..3012)
                     /locus_tag="VLJ17_07715"
     CDS             complement(2542..3012)
                     /locus_tag="VLJ17_07715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome, methanol metabolism-related"
                     /protein_id="HSV22900.1"
                     /translation="MAPALADGSGDPTAVKNEDGKYFDKQGNPTYKIQPDGTVDYYTY
                     SGFVRYHSECHVCHGPDGMGSSYAPALVDSLKTMSYGDFLGIVAGGRKNVNTANENVM
                     PAFGTNKNVMCVIDDIYVYLRARANDAVPRGRPAKHEEKPAAAAKWQDSCFGQS"
BASE COUNT          726 a          887 c          917 g          703 t
ORIGIN      
        1 ccgcgtttcg ccgccttcac ccccgacggc acggagctgt gggtgtccgc ggaagtgggc
       61 ggcaccgtga gtgtcatcga cccggtcaaa catgtggtcg agcaccgcat cgaatttgcc
      121 attccgggaa tgcggtccga cgccattcaa ccggttggga tcaatatcac cagagacgga
      181 aaattggcct tcgtggcgct tgggccggca aaccacgtcg ccgtgatcga cataaagacc
      241 cacaaaattc taaaatatct attggtcggc cagcgggttt ggcatatgga gttcacgccc
      301 gacgaaaagt atctgctaac gaccaatggt ttatccaacg acgtttccgt catcgatgtc
      361 gccaatctca aagtcgtcaa caccgtccaa gtcggcgaac tgccctgggg cgtgacgatt
      421 tcggaccatt gattttgcag gattgaaaat gttgagaaaa gcctttgttc gccaccgtgc
      481 tgcggttaat tgcgcgggtt ttctgctcgc cttttacgca gctctgcttt cgccgttgcg
      541 cgctgacccc cggtatccgg attggccctg tatgcagccc aaggtgccgg agctctcggc
      601 ggccgctatg tggagcggtc cctcgatcgc ggatgtcggc aatagctggc aggacgacag
      661 caaggtcagg gaactggttg aaatgatcgc ggcgcgccgc acgccgttgg atacggcgca
      721 aaaagcaatc gcggatttca tgaccggcag tcccgccgaa aaggaacgga aggcgaaggt
      781 ggtttttgcg ggagttttcg acacactcgg cgatcaacgc cgggaagtga tggaaggtct
      841 tgaaagggtg tcgcgcaagg agacggatct cgccgagaag attaagtccg acgtggccaa
      901 tttgcgggaa ctgcaggaca aacctgacgc tgatcaatcg gaagtaaaaa acctcgcaag
      961 tgaaatcgaa tggagcacaa gaatttttga agaccggcgc aaaacgattc gctatgtatg
     1021 cgaagtacct accaccatag aacaacgggt gttcgccttg gcgcgcagca tccagcaaaa
     1081 cttgcattga actctactcg ccatctgtcg gagcaggttc ggctttttgg accggaaggc
     1141 cgctagcttg ccagccatcg gtaccgtcag gataccaagc gacattttta taccccatcg
     1201 tgagagcacg cttagcggcg ttccaggaca tccaacagtc cttctgacaa taaacaacga
     1261 gccatcgtga ctggtcgcgc tgggtaacgc gcgcaagtcc atcgcgaaga tagcgttcag
     1321 tcgaacttgc gagtgcacca tagccggtat ccggtagcca tatactgccg gggatgttca
     1381 tgtgcgggtt ttcgtgccaa atcgtgccag gcggcaaatt ggtcgggcga gggggatgcg
     1441 gtagaacatc aacgaaagcc gcgccatcct tccaaagttc gtcggcgtcc cgagtagtaa
     1501 gtacccgagc acccgcaagg gtcgtcggag tcggtgcgcg ataatcctgc gttcgatagc
     1561 cggttggctc tggaatactg tcttggctag aagccgaaac gacgaaggcg acgagccaca
     1621 agcccagcac aaacccgcgg ctcatggctt ttgcgtcaga tcattgctgg ttatgaactg
     1681 gtcgctctcg ttgactatgg gtatgccgaa atcaagcagg agcttgttga tggctggttg
     1741 gttctccgca atcaactcat tcaactgtct tttccagttc tgatcggaag gacgaacacc
     1801 catgacgata cgatagtcga gatgcggtcc gcctttttct tttaaaagca gtgttgtctt
     1861 catcgcggag gcggcatgcg aggcgtagta tccagccagc ggcccccaca acacccccgc
     1921 gtcaatctca ccggagttga tgtcattcac cattgcctgt gccgaggaat cgtatcgtgt
     1981 atccacgacc aatgggtatg acttggaatt cgctatgaga ccgtcggaca ccaagtagct
     2041 tgcagggggg gtgccggcaa cgactccaat atgcttgtcc tttagccgtg cgtcctgaag
     2101 cgtctcaacg ccggcgatcg ggctgctggt tttggataca agcgcgtagg cagtccggta
     2161 atagggattt gtgctctgcg ccagctcgcc gccttgcggg aagcccatga caacgtcaca
     2221 gcgatacgaa ccaagtgtca ttcgcacgaa accggtcgcg ccaggataat aggtataggc
     2281 gagcgacttg ccgagttttg tagcaaaaag ctccgcaatc ttgttctcga agccctcgcc
     2341 cttgtcattc gagaaaggca aattgtttgg atcggcgcaa acgcgcaaca cctttggatc
     2401 gatgagttcc aggtcgccct gcaacacgcc gccggcctgg ccataggtac taatcggcgc
     2461 aaggacagta cccaatgcgc agcatgcgga gctcaccaac aggcgcaatg cgaccgcgct
     2521 tctcatcgat ctatctgctc ctcaactttg gccgaagcag ctatcctgcc actttgctgc
     2581 ggccgcgggc ttttcttcat gtttggctgg tcggccgcga gggacggcgt cgttagccct
     2641 tgctcgtaag taaacataaa tatcgtcaat tacacacatc acgttcttat tggtgccgaa
     2701 tgcaggcatc acattctcgt tggcggtatt cacattcttg cggccgccgg caacaatacc
     2761 aaggaaatca ccgtagctca tcgtcttcag cgaatcgact agcgccggtg cgtaggagga
     2821 acccatacca tccgggccat gacagacgtg acattcggaa tgatatcgga cgaacccgga
     2881 ataggtgtag tagtcgacgg tgccgtcggg ctgtatttta taggtggggt tgccttgctt
     2941 gtcgaagtat ttgccatcct cgtttttgac ggccgtcggg tctcccgacc catcggcaag
     3001 cgcgggagcc atcgaaaaca atgcggcgac caatatcaat gcggtcgctc catgacgggt
     3061 tctcacagat aaattccttt catgaagcga cgacagaaac gctactccgg cgcgccacgt
     3121 tgagtagcgc gccggagcgt ctgtgcatca gcttttagtt cgcgcggctc agggcagcac
     3181 gaacaccgtg agcgttccgc cgagcgcggt gtagttggtc agcgcggcat aac
//
LOCUS       DATILV010000342         6414 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3915283, whole genome shotgun sequence.
ACCESSION   DATILV010000342 DATILV010000000
VERSION     DATILV010000342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6414
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3915283"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..762
                     /locus_tag="VLJ17_07720"
     CDS             <1..762
                     /locus_tag="VLJ17_07720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013420875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HSV22901.1"
                     /translation="FQNDTYGNLVLGVAPVFFDSRLFMKAGATEFAQLEILGERAFHL
                     YNKPDAGIWELRSRARIHTSSSVMCWAACDRLSKIAVRLQQAQSAALWAKRADTIRDA
                     ILARAWSEKRQAFVESFDGVHLDASVLLMGEVGFLEPRDPRFVATVERIEQVLGVGPH
                     LLRYEEADDYGAPETAFNICAFWRLDALARIGRSDQAREKFEELLQARNHLGLMSEDT
                     YPSNGEAWGNFPQTYSMVGIINGAMRLSRPWERVV"
     gene            complement(775..1566)
                     /locus_tag="VLJ17_07725"
     CDS             complement(775..1566)
                     /locus_tag="VLJ17_07725"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HSV22902.1"
                     /translation="MFQASDGAAYEMWLGRWASRLAKVFLDFAKFPETGDLLDVGCGT
                     GALTLAMAERWPARRVIGVDLAAPFIAYAQMRRAGDQPIFEIGDACALKYQDGRFAGV
                     AAHLVFLFIPRPEVALREMRRVTSSGGTVAAVVWDARGGLVFQRMLWDTAVAIDPNAR
                     IARDNLFANPVAIPGGLARFFQQAGLLDVETQSLTIRMDYENFEDYWRPFLGGQGPVG
                     AYFANLAPDLKARIKEAVRDAYCSGSPDGPRSLTASAWAVQGKAP"
     gene            complement(1746..3056)
                     /gene="dctA"
                     /locus_tag="VLJ17_07730"
     CDS             complement(1746..3056)
                     /gene="dctA"
                     /locus_tag="VLJ17_07730"
                     /inference="COORDINATES: protein motif:HMM:NF002461.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006835 - dicarboxylic acid transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate transporter DctA"
                     /protein_id="HSV22903.1"
                     /translation="MRAFGKLYVQVIIGVVLGIALGYAEPALATAVKPLGDAFIKAIK
                     VMVAPIVFTTVVVGIATMGDLRRVASVGIKALIYFEVVSTLALLIGMIVGNVWPFGSS
                     MNIDAKTLDAGAVASYVNQAKSLSITDFLLNIIPTTFIDPFAKGEILQILFVAVLFGL
                     ALCQLGERAKPLVNLLDQAAKGLFGMVRVIMYAAPIGAFAAIAFTVGKFGITTLLDLG
                     EFVLAVFAVCLGFVVVVFGVALRLCGFRLSRVVGYFKEEILFVFAATSSEAMMPRCME
                     KLERLGCSKEVVGLVMPAGFSFNMDGAAIYMAMAVLFIAHATNIDLSWSQQLVMLFVM
                     LFTSKGVVGVTGGGFVALAATLPAVGILPIGGLTLLLGVDRFMSEIRAAANLTSNIVA
                     TLVVARWSGAVDLAQAMPMLGTRKGRRAPLTDEVPPGVIPAPAE"
     gene            complement(3464..4183)
                     /locus_tag="VLJ17_07735"
     CDS             complement(3464..4183)
                     /locus_tag="VLJ17_07735"
                     /inference="COORDINATES: protein motif:HMM:NF028178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HSV22904.1"
                     /translation="MLRSRCVLLGLFASLFAVLLVATKSSKAQTASRPIAEVGDRDVT
                     TAAANGENVKVARVNNWTLGIAAGLLEGSFIRFASELAKALDDRDNLRILPIVTYGAV
                     ENIADLLYLKGIDIAITHANVFDLCKKSGASKNVEQRINYISQMHNTEFYVLASSDIK
                     SLQDLAGKKVGFHVKGSGPSVTGPMIFERLGIQVEPVYVNHTFAIEKMKTGEIAAIFQ
                     LGAKPNDLLAKLKPEPAFRSS"
     gene            complement(4239..5321)
                     /locus_tag="VLJ17_07740"
     CDS             complement(4239..5321)
                     /locus_tag="VLJ17_07740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22905.1"
                     /translation="MSAPVRELDDDGLSKDGPLNYAPKRVRRSGQVPIGVPRKADVAP
                     RFAAPGAPEPPWGRKKQRQAFAGDVAMTELRTRLALTPDRLPDPPLPVATVSKSYPAR
                     RMVSAIVVAIVGFAAYRWAVAPPPARSQGQFTLSSNQLSNQEDSAPERSLRSVSPAHL
                     KTPSPDPQLPQVQPAASSLAPRIVEQVRGVTDGATSANAQRVAATSAPLTLTQPASAK
                     SVTSKASLPAADEQKSRDNTAVDRSGVRLESSGSSSFAPARSQPRRHEAVEIALMVRN
                     GTEFMANGNIGAARMMFQPAAEAGDPMAAFALAETYDPMVLRKLGAKGGITPDVALAH
                     SWYEKAKDLGSPVAPERLERLARLTE"
BASE COUNT         1381 a         1989 c         1789 g         1255 t
ORIGIN      
        1 tttcagaacg acacctatgg caatcttgtt ctgggcgtgg cgccggtgtt tttcgattca
       61 cgcctgttca tgaaggctgg cgccaccgaa ttcgcccagc tggaaatcct cggcgagcgc
      121 gcctttcacc tctacaacaa acctgacgcc ggcatttggg aactccggtc gcgggcacgc
      181 atacacacat cgtccagcgt gatgtgttgg gcagcctgcg accgtctgtc gaagatcgca
      241 gtccgtctcc aacaagccca gagtgccgcg ttatgggcca agcgggccga caccattcgt
      301 gatgcgatct tggcccgggc gtggtcggag aaacgccaag cgttcgtcga gagcttcgat
      361 ggcgttcatc tggatgccag cgtgctgctg atgggcgagg ttggattcct ggagccccgc
      421 gatccgcgat ttgtggcaac cgtcgagaga atcgagcagg tcttgggtgt cggtccgcat
      481 ctgttgcgtt acgaagaagc ggacgattac ggtgcacccg agaccgcctt caacatctgc
      541 gccttctggc gcctcgacgc cttggcgcga atcggccgca gcgatcaggc ccgggagaaa
      601 ttcgaggagc tgctccaggc ccgcaatcac ctcggcctga tgtcggagga tacctatccc
      661 tccaacggcg aggcctgggg caattttccg cagacctatt cgatggtcgg catcatcaac
      721 ggcgccatgc ggttgtcgcg tccctgggaa agggtcgtat aagcaccgtt accgctatgg
      781 tgcttttccc tgcaccgccc aagccgacgc cgtcagcgac cggggtccat cgggcgagcc
      841 cgaacaatac gcatcacgaa ccgcttcctt gattcgcgcc ttcaggtcgg gagcaagatt
      901 ggcaaagtat gcgcccaccg gcccctgccc ccccaggaag gggcgccaat aatcctcgaa
      961 attctcgtaa tccatccgaa tggtgaggga ttgcgtctcg acgtctagca gtccggcttg
     1021 ttggaaaaat ctcgccagtc cgccgggaat agcgaccgga ttggcaaaca gattgtcgcg
     1081 ggcgatacga gcgttcggat caattgcgac cgcagtgtcc caaagcatgc gctgaaacac
     1141 gaggccaccg cgtgcatccc acacgaccgc cgcaacggtc ccgccggaag aggtgacacg
     1201 ccgcatttca cgcagcgcga cctcaggtct cggaatgaaa aggaaaacca agtgggccgc
     1261 cactccggca aaccgcccgt cttggtattt caacgcacaa gcatcgccta tttcgaagat
     1321 cggttggtcg ccggcccgac gcatctgcgc atatgctatg aagggcgcgg cgagatcgac
     1381 gccgatcacg cgccgggcag gccaccgttc ggccatggcc aacgtaagtg cgccagtgcc
     1441 gcaaccgaca tcgagcaggt cgccggtttc gggaaattta gcgaagtcaa gaaagacttt
     1501 ggcgagccga cttgcccagc ggccaagcca catctcatac gcagctccgt cgcttgcttg
     1561 aaacacaggt gacgcctgtg acaattttcg tgcctctttg atgccgcaat accgcttgcg
     1621 gcacttaacg aacctcttcg acaaaagctc tcagcccgct gcaccgctga ccttgagacg
     1681 ctgaatggct ttcgtggcga tccgatccgt ccctttatat ccggttatat acgcccgcgg
     1741 tcggctcatt ccgctggcgc cgggatgact ccggggggaa cctcgtcggt cagcggcgcg
     1801 cgccgcccct tacgcgtgcc cagcatgggc atcgcctggg cgaggtcgac cgcgccgctc
     1861 caacgggcca ccacaagcgt tgccacgatg ttgctggtga ggtttgccgc cgcgcggatt
     1921 tccgacatga agcggtcgac gccgagcagc agcgtaagcc ctccaatcgg caggatgccg
     1981 accgccggca gagttgcggc gagcgccaca aagccgcctc ccgtgacccc gacaacgcct
     2041 ttcgatgtga acaacatcac aaagagcata accagctgct gcgaccacga caggtcgata
     2101 ttggtggcgt gggcgataaa caggaccgcc atcgccatgt agattgctgc cccgtccatg
     2161 ttgaaggaga atcccgccgg catgacaagg ccgacaactt ctttcgaaca acccagccgt
     2221 tcaagctttt ccatgcaccg cggcatcatc gcctcggagg aagtcgcggc aaacacgaac
     2281 agaatttcct ctttgaaata cccgacgacc cgcgacagcc tgaaaccgca aagcctgagc
     2341 gcgacaccga agacaacgac aacaaagccc aggcagaccg cgaataccgc cagcacgaac
     2401 tccccgagat cgagcaacgt tgtaatgccg aacttgccaa ccgtgaacgc tatggcggcg
     2461 aaagcaccga tcggggcggc gtacataatc acgcgaacca tgccgaacag acctttcgcg
     2521 gcctgatcca gtaaattgac cagcggcttt gctcgctccc cgagttgaca cagggcaagc
     2581 ccgaacaaaa ccgcgacaaa caatatctgc agaatttcgc cctttgcgaa cggatcgatg
     2641 aacgtcgtcg gaatgatatt caaaagaaaa tcggtgatgc tgagcgactt agcctgattg
     2701 acgtagctcg caacggcccc cgcatcgagc gtctttgcat cgatattcat gcttgagcca
     2761 aacggccaga catttccgac aatcattcca atgaggaggg cgagcgtcga cacaacttca
     2821 aaataaatca acgccttaat gccaacagaa gccacccgcc gcaggtcgcc catcgtggca
     2881 atacccacca ccaccgtggt gaacacgatg ggcgcgacca tcacctttat ggccttgatg
     2941 aatgcatcgc cgagcggctt gaccgccgtg gccaaagccg gttccgcata gccgagcgca
     3001 atgccgagca cgacaccgat gatcacttgt acatatagct tgccgaaagc acgcatattt
     3061 tttcacctat tgatttgatt ccggcggttc ttttgctgcc attccaggaa ctctcgaaag
     3121 agaagcgaat tagtcgagct cccggcctcc gagccacccg ccaccgtttc gattgagcct
     3181 acaggcttag ctgcacccgg gtccttcacc acagcagcga gcacttcctc cgccaccgcg
     3241 tagcgagtcc tccgggcaca cgcgcggtca ggttaatctc tttccacttc ggatgaaacg
     3301 ctctacccgt cggaagcgat cactgttctt gggccaatta tacactgcca gaacaaccgg
     3361 aacagccaac gtatcgacgg tgtcgccagc ctctatgaag ttcggataat cgtcatgcgt
     3421 cagcgtggca gggatataat agtccgaaaa cttcttgccc cacttaagag gaacgaaatg
     3481 caggttctgg cttcagctta gccaagagat cgttcggctt ggccccaagc tggaagatag
     3541 cggcgatctc gccggtcttc atcttctcga tcgcaaaggt atggttgacg tagaccggct
     3601 caacttggat gcctagacgc tcgaagatca tcggccccgt gacgctcgga cccgatccct
     3661 tgacgtgaaa tcctaccttc ttgcctgcca gatcctgcag gctcttaatg tctgagcttg
     3721 ccagaacgta gaattcggta ttgtgcattt gcgatatgta gttgatccgc tgctcgacat
     3781 tcttcgacgc gccggatttc ttgcacagat cgaagacgtt ggcgtgggtg atcgcgatgt
     3841 cgattccctt tagatagaga agatcagcga tattttcgac cgccccgtaa gtgacaatcg
     3901 gcaggatgcg gagattgtcg cggtcatcga gcgccttcgc gagctcggac gcgaagcgga
     3961 taaagctgcc ctcaagcagg ccggcggcga taccaagggt ccagttgttg acgcgagcca
     4021 ccttcacatt ttcgccgttg gccgcggcgg tcgtcacgtc gcggtcgccg acctcggcga
     4081 tcgggcgcga tgcggtctgg gctttcgacg acttcgttgc gacgaggagg acagcaaaca
     4141 gcgaagcgaa caagccgagc aacacgcatc gagacctcag catacaccaa ctccccatca
     4201 actttccggc tgatgcggat agggacctgc gttgccgatc actcggtgag ccgcgccagc
     4261 ctttccaggc gctccggggc gactggcgag cccaggtcct tcgccttctc gtaccagctg
     4321 tgagccagcg caacgtccgg agtaattccc cccttggcgc ccaatttcct cagcaccatg
     4381 gggtcgtagg tttccgcaag agcaaaggct gccattgggt cgcccgcttc cgcggcaggt
     4441 tggaacatca ttcgggctgc accgatattt ccgttcgcca tgaactcagt gccattcctg
     4501 accatcaatg caatttcgac cgcctcatgc cgccgcggtt gagacctggc cggcgcaaaa
     4561 gaactactgc ccgacgattc gagccgcacg ccgctacgat cgaccgcggt gttatcgcgt
     4621 gacttttgtt catcggcagc cggcaggctt gccttcgatg taacggactt tgcagacgcg
     4681 ggctgcgtga gtgtcagcgg cgcagaagta gccgccacgc gctgcgcgtt cgccgacgtt
     4741 gcgccatccg tcacaccgcg cacctgctca acaatccgtg gcgcgaggct gctcgcagcc
     4801 ggctgcacct gcggcagctg tggatccggg cttggggtct tgagatgtgc cggcgacacc
     4861 gaccgtaaag accgttccgg cgccgaatcc tcttggttgg agagttggtt ggaggagagc
     4921 gtgaactgcc cctgcgatcg ggcgggcggc ggagcgacgg cccaccggta tgcggcgaag
     4981 cccacgatcg ccaccacgat ggcgctcacc atccggcgcg ccgggtaaga tttcgacacg
     5041 gtcgctacag gcaacggcgg atccggcagc cggtcgggcg tcaaggcaag tcgggtgcgc
     5101 agttccgtca tggcaacgtc gccggcaaat gcctggcgct gcttcttgcg cccccaaggc
     5161 ggttccggtg ctcccggtgc cgcaaatcgc ggcgctacat cggcttttct cggcacgcca
     5221 atcggaacct gtcccgaacg ccgtacccgc ttcggcgcat aattcagcgg cccatctttc
     5281 gatagcccat catcgtcgag ctcccgaacc ggcgcactca tgatcccctc cacgctttac
     5341 ctaatgctgg attgctagct cgtattgcgg ccgatctctc tgctttggag atttggttgc
     5401 aatgcagggt gtcagatcaa tgccttatga agcgctgcag cgggcgtgcc gcgcggtccc
     5461 cgctgccttt tcaaccaagt ccctgggctc aaacaacaga gtgaccccga aggatatgac
     5521 gtatccaaaa cggaacttta gttgccccgc aggttgcatc tatttaaaaa tacattgcac
     5581 gattgttggg cgggattgtg atcttttctc gaaaatctac agcgactttc gctgcacgcg
     5641 gacaatccgt cgagagctgc aagagtgcgc cttcgatttt tgcgatttgc ccaataaaaa
     5701 aggccccgca aagcatgcgg ggccaaagtc aagggaggaa actccgtcaa ggagcgggat
     5761 taaactaccc caactttctc tcctaatggt tgcaaatata ccacatcata ccaaaatttt
     5821 gacacgcaaa tagcaaaata ggatgatagt ccgtattgtg tgaaattact ttcgagatca
     5881 ataggttgac caaacgaccg gcgcaccggt caaacccgga tcgcccttga tctgtcatga
     5941 tcagaagcgg aaagagacac gctgcgccga tcagggcatg tcccggctgg acgccgcaac
     6001 ccgcgccgaa cagctccaaa taggcggcaa catgcgtgtg gctaaccctc ggctctcgcc
     6061 agggcgatca cctcacgcca agcaattgcc gctgtttcgc gctcggtgga tatcggcaat
     6121 caattccagc cgcctaacga catcgccggt agccgttcaa cctcgcttaa ccgcctgcaa
     6181 aagaacgtct gccagttcga gacggcacag cgccggaacc gccgtcgtca cgcgcgcttg
     6241 aaaaagcgca tcgggtgtac ggggaagcgc cgttctcgaa aggtgcgtct ttcgctgcaa
     6301 agccccgact gtaatcgcag ggacaatctg gctgtaatta acaccctcgg cgcagcgatt
     6361 atgactcttt gagctgggcg ttgcgggtgg ccgcagctgg atccggacag gcgc
//
LOCUS       DATILV010000343        10919 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_850549, whole genome shotgun sequence.
ACCESSION   DATILV010000343 DATILV010000000
VERSION     DATILV010000343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10919)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10919)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10919
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_850549"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(577..1146)
                     /locus_tag="VLJ17_07745"
     CDS             complement(577..1146)
                     /locus_tag="VLJ17_07745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013912867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6101 family protein"
                     /protein_id="HSV22906.1"
                     /translation="MIAGGATPAGSSRCVRLDPLSLPVRFRAVDAAADQCRRIVDLHR
                     DIVVLRRSVRGVRIKVSLPITAFLGIVMRFVPPDGTDPGAIAVILEHRDPALSVPLFE
                     APDANDVLAEWQLWARVFGLPLLVADDDGQLYEPFRRLGSIRISDPCERLRRSQLRRR
                     RPSILMRRKVGRPGVLAAVYREREIIARN"
     gene            1843..2091
                     /locus_tag="VLJ17_07750"
     CDS             1843..2091
                     /locus_tag="VLJ17_07750"
                     /inference="COORDINATES: protein motif:HMM:NF012673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HSV22907.1"
                     /translation="MHSVALRFAHVVDGTFDAAIAGHSSRDWDLAAADLLVHEAGGTL
                     TTTIEGTTNGYNGATTAPDAVVAACPPPSFNRLATELA"
     gene            2140..2391
                     /locus_tag="VLJ17_07755"
     CDS             2140..2391
                     /locus_tag="VLJ17_07755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009758884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4170 domain-containing protein"
                     /protein_id="HSV22908.1"
                     /translation="MSGETQSKQLLHLVLGGELTRIGEVEFKDLEKVDIVGVYPNYAK
                     AYVAWRAKAQQTVDNAQMRYFIVHLHRLLDPETATQGGH"
     gene            2451..3116
                     /locus_tag="VLJ17_07760"
     CDS             2451..3116
                     /locus_tag="VLJ17_07760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008966842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HSV22909.1"
                     /translation="MIGRMAAEYLRLVWRTSRLTIEPANLYETVEPQQPVIVAMWHGQ
                     HFMVPFLSRGHRVKVLISRHRDGEINAHAARQLGIDTVRGSGDHGRRFDLKGGVGAFK
                     SMLTALAEGYNMALTADVPKVARVAGLGIIKLAQFSGRPIYPVAVATSRRIVLNNWDR
                     SAINLPFGRVAIVASDPVLVPPDADGSMMEQCRAIVEQRLSRVTDRAYEIVDRKDRHA
                     VRG"
     gene            3109..4413
                     /locus_tag="VLJ17_07765"
     CDS             3109..4413
                     /locus_tag="VLJ17_07765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /protein_id="HSV22910.1"
                     /translation="MADSMPMTLSAYRLVTAAGTMFAPRLLERRMARGKESPDRLAER
                     RGEPSAPRPPGPLVWVHGASVGEFIAVLPVVERIRARGFTVLMTTGTVTSAALAEKRL
                     PSGAFHQFVPLDAPAFVARFLDYWRPGLALFVESDLWPNTILAASERHIPMLVVNGRL
                     SERSFTRWRHFPRTIETLLRRIDLCLVRSPNDAERFRTLGAPRISITGNLKFDVPALP
                     VDTRKLATLTEATKGRVIVVAASTHPGEESVIIDAHRRLKITYPDILTIIAPRHPQRG
                     PAIADIAATAHLRSALRSTGASPAGDIDIYVFDTLGELGLIYQLAPIVFMGGSLVRHG
                     GQNPIEAIKLGAAILHGPHVFNFGEIYEELDRTTAAELINDAGTLTARIDAWIKDGAE
                     RERAAERARRYVDKLGGALDLTASALEPYFMQLRNQSRTAHA"
     gene            4406..5422
                     /gene="lpxK"
                     /locus_tag="VLJ17_07770"
     CDS             4406..5422
                     /gene="lpxK"
                     /locus_tag="VLJ17_07770"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018263112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HSV22911.1"
                     /translation="MRDLAFWWTDRSAAATLLAPLGACYGAIVARRMARPGRKAPVPV
                     ICVGNFTLGGAGKTPTAIALARHLLESGHCPFFLSRGYGGRVAGPVRVERQRAIEVGD
                     EPLLLGRVAPTIVARDRLAGALAAAEGGADAIVMDDGLQNPSVDKDLAIAVIDGRRGI
                     GNGRIFPAGPLRAPLEAQLDHIDAVLLVGVAGRAAQCAIDVAQRHGLPVFHSELRPQP
                     SAVAALTGRPVLAFAGIADPAKFFATLEAFGISATVRRPFPDHHCYTADEMAALVASA
                     QRDGLTLVTTEKDMVRLNGVPAAADLIARSTVLPVTLTFQDTAAVKAILRDAMQGQRK
                     PVRP"
     gene            complement(5419..5640)
                     /locus_tag="VLJ17_07775"
     CDS             complement(5419..5640)
                     /locus_tag="VLJ17_07775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2093 domain-containing protein"
                     /protein_id="HSV22912.1"
                     /translation="MLNRFDPYSPSAGEAEVKYLDGDFRVMRPGAFVRCAVTGTPIPL
                     EELKYWSVERQEAYANPKAVLQRLRGYID"
     gene            complement(5791..7740)
                     /locus_tag="VLJ17_07780"
     CDS             complement(5791..7740)
                     /locus_tag="VLJ17_07780"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HSV22913.1"
                     /translation="MPAIKTAPYGSWKSPITSDLIVAQSTMLSEVRLDGNDICWLEGR
                     PQEQGRNVIVRAGPDGIARDITPVGFNVRTRVHEYGGASWLVADGTCIFSNFADQRLY
                     RQLGNSAVPEPLTPEPSSRERHWRYSDGVLDQRRRRWIGVREDHSGDGEPVNAIVAID
                     LDRPGASPGRMLAGGHDFFCTARLSPDASRMLWLAWDHPNMPWNGTTLYLADIDADGA
                     PAGARIIAGGVAESVFQPEWSLDGKEIIFVSDRTGWWNLYAYNVGTAATRPLCPMTAE
                     FGMPQWNLGMSTYAFADARRIVCAYTKDGLGQLAVLDLTTATLQAIETGFTEFGSIRA
                     DRSRVVFRGGAPDQPTSIVSLDLQSGQCRTLKQATDLLGRSELRIASYLTKVEPVEFP
                     TTGGKTAFGLFYPPHNCGYVGRAEERPPLLVKCHGGPTSSASSTLNLGTQFWTSRGIA
                     VLDVNYGGSTGFGREYRERLKLNWGVVDVDDCVNGAKFLTQRGLVDARRVVISGGSAG
                     GYTTLAALAFRDFFQGGASYYGVSDAAALARDTHKFESRYLDWLIGPFPEMEARYRER
                     SPLHHADRLSKPVVFFQGAEDAVVPPNQTEVMVEALRRNGNAVGYFLFSGEQHGFRQA
                     ANIKRCLDAEIAFYAVQVFRIGLTF"
     gene            complement(7755..8879)
                     /locus_tag="VLJ17_07785"
     CDS             complement(7755..8879)
                     /locus_tag="VLJ17_07785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010685321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-propeller fold lactonase family protein"
                     /protein_id="HSV22914.1"
                     /translation="MKCAVIASLAAIAILAGPLTATAQDAKTTTSAAIPQFQVDALWP
                     KPLPNNWILGQVAGITVDRFDRIWIVQRPNSLTPRERAAEQNPPPSKCCAAAPPVLVF
                     DQSGNLLRAWGGPGPGYQWPETEHGIFIDDNDFVWLAGSGKPDGQLLKFTMDGKFVLQ
                     IGKSGTGNDSNSTERLGSPADIAVDAAAKEVFAADGYANRRVAVFDSETGAYKRHWGA
                     YGKKPSDEKTPPYDPAKPPSQQFGNPVHCIRFDKDGLVYVCDRTNDRVQIFRKDGTFV
                     SEHFYEKNTLATGSVYELVFSPDKEQKFIYMIDGANGEVRIVDHGTKEVLGRFGRVGR
                     QAGQFIALHNVTVDHQGNIYTAEVNTGQRIQRFRRLDPQN"
     gene            9140..9937
                     /locus_tag="VLJ17_07790"
     CDS             9140..9937
                     /locus_tag="VLJ17_07790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008966838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HSV22915.1"
                     /translation="MFLLAGSIAEAGGPESVEFGNGDVTLKAIVYRPEGTGPFPAVIG
                     MHDCSGLTNSSGVVASKYREWAQLLVKSGFIVLFPESYGSRGIGNQCTARNRPVRPDH
                     ERVADANASRQWLDEQPDVRTDHISLLGWANGGSSVLWTVRPQRKTDDKPDFRSAVAL
                     YPGCRRLDSTAWSARVPTLILIGAADDVTSSQDCEHMVAGAKGRSARIAITVYPGAFH
                     DYDHPNRPPQVRTGYAVSADGSGRIHTGTNTAARADSLKRVPQWLAR"
     gene            9922..10896
                     /locus_tag="VLJ17_07795"
     CDS             9922..10896
                     /locus_tag="VLJ17_07795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009208394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV22916.1"
                     /translation="MVGTVIAKLKFRAAVAALAAAISGQAAADDLLRLAIGQRGLWDS
                     SIAEIGQAAGIFRRRSLELQTVYTSGGGETQQAVISGSVDIGVAAGTLGVLGAFAKGA
                     PIRIIAGEATGTAEYYFVRSDSPVGKDFAGVTPNMTLAYSTAGSGTHITGLRFMKERN
                     FTAKLTATGSVPATFTQVMSGQVDIGFSTPPFGLDAIEAGQIRLIALANDLPSVRNQT
                     VRVIIANATDLARRREVYDRFIRAYGETIEWMYADDQAIAAFARYATISSAMARRVRD
                     NFYPKAMLQLDRVMGLAELIEDAIAFKYVAQVLTPAQTAELLQMPMRP"
BASE COUNT         2121 a         3349 c         3309 g         2140 t
ORIGIN      
        1 ccttgccgct ccatccgagc cacacgccac cgttatgctg gagcgccggc cgcaaggcga
       61 cctcgagccc tccggcacgc ttggcaccat ccccggaggg aaccgaaacg cgattcgaga
      121 cgaccactag tcgtgccaat atcgatcctc ccagctccgc aattgacgct gcgttgccaa
      181 gatcaaacca gccattgggg caaataaggg tttctcagca agaaggccac agcggtctgc
      241 gttattgtat gacatcgaag ttattcaacc agatgtagta gtacatcaca agtgcaatct
      301 gtagatcgca aatatgacct ttgtatgcgc cctaatgatg gcaccggtct ttccagaagt
      361 cgcccggctt aagatctgcc atcttgttag tcggccgcaa tgacagaaac gatggggacg
      421 cccaaataat ggcacgaaag atcggccatg cggtccgcta caacgccggt gaaactcttc
      481 tccctcagca gaatcggctt gtcgtcagaa actctaaacg cacgttcgaa cgacgcatct
      541 cgtcgcgcgg acctaaacgc aatcgcaaat gtgcgactag ttacgggcga taatctcgcg
      601 ttcgcgatac actgccgcga gcacacccgg gcgacccact ttgcggcgca tgaggatact
      661 cgggcgacgc cttcgtaact gactgcggcg caggcgttcg cacggatcgg agatgcgaat
      721 ggacccaagg cggcggaatg gttcgtaaag ttgaccgtcg tcatcggcaa caaggagcgg
      781 caagccgaaa acacgggccc acagttgcca ttcggcaagc acgtcgttgg cgtcaggcgc
      841 ctcaaacaaa ggcaccgaca gtgccgggtc gcgatgctcc aatatgacgg cgatcgctcc
      901 cggatcggtg ccgtcgggcg gcacgaaccg catgacgatg ccgagaaaag cggtgatcgg
      961 cagcgatacc ttgatgcgca ccccgcgcac tgagcgtcgc aggacgacga tatcgcgatg
     1021 cagatcgacg atccgcctgc attggtccgc agccgcgtcg acagcgcgga agcgcaccgg
     1081 cagagaaaga ggatcgagcc gcacgcaacg gctcgacccg gcaggtgtgg ccccgccagc
     1141 aatcattcaa cgcctcacag tcccagtcgc cagtactctc ttggtcccgg tcgatcatgg
     1201 tgactgtagc gcaacaccgt cccaattgac ttaacgaggc tggttaattg gcggtttccg
     1261 gtggtggatc gcagatcatg attgataagg tgttgcgcgt tgtgtggagg gaatgttgct
     1321 gggatccgat cacaatgcgg gggacaggaa acgtcggcgc tggcaaacga gctgacactg
     1381 gtgatggcgc gaagcgggtg ccgccgcgcg tgcagcattc ggcaatcctg tcaaaacctg
     1441 ggtcaaagaa cacaattcgc cggtgtcgga ggtcgacatc gcggtcaacc atctactgta
     1501 attgcggttg gccgccattg cccctgatgt gggctggctg tcggaagagt ccgaagacca
     1561 gcacggctag cgtcccaaat ctgggtcgtc gatccgatcg acgggacaca cgcgtcattg
     1621 ctggtcgccc tgatggggcg atttcagtgg cgctcgttga ggcgtgtcgc ccggttgtag
     1681 ccgcactcca cgcgccgatg cgcgaagagc tcttccttgc agttgccggc ggcggtgcga
     1741 cacgcaacag gcgacgcgat cgaacatgtg cggatcgggg cccccaaagg ctttctcgac
     1801 cgccttgccg cggtggcccc ggcctgtacg attcccccta ggatgcactc agtggcattg
     1861 cgcttcgccc acgtcgtgga cggcacgttc gatgctgcca ttgcgggcca cagcagtcgc
     1921 gattgggatc ttgcggctgc cgatcttttg gtgcacgaag ctggcggcac attgacgacc
     1981 acgatcgagg gaaccacgaa cggctataac ggcgccacaa cggcccccga tgctgtcgtt
     2041 gcggcttgcc cgccaccaag ctttaaccgt cttgctacgg aattggcata atctgttacg
     2101 ttgacgcggc ggtgcggccg gtgatcaggg gaaccacaaa tgagcggcga aactcagtcc
     2161 aagcaactgt tgcatctcgt gcttggcggc gaactcaccc ggatcggaga ggtcgaattc
     2221 aaagatctcg agaaggtcga cattgtcggc gtttatccga attacgccaa ggcctacgtg
     2281 gcgtggcggg caaaggcgca gcagacagtc gacaatgcgc agatgcgcta tttcatcgtg
     2341 catctgcatc gtctgctcga tccagaaacg gccacacagg gcggacatta aagcgtcgga
     2401 ctcgcatgct ttcgtcacga cgtgttgcgc agtcgccagc cgtacaacga atgatcggcc
     2461 ggatggctgc cgagtatctt cggttggtgt ggcgaaccag ccgcctcacc atcgaaccgg
     2521 ccaatctcta cgagactgta gagccgcaac aacccgtgat cgttgccatg tggcacggtc
     2581 agcatttcat ggtgcccttt ctcagccgcg ggcatcgggt caaggtgctg atttcgcgcc
     2641 atcgcgacgg cgagatcaac gcccacgcgg cacggcagct cggcatcgac acggtgcgag
     2701 gatcggggga ccatggccgc cgtttcgacc tcaagggcgg cgtcggtgcc ttcaagtcca
     2761 tgctgaccgc cctcgcggag gggtataata tggcgctgac ggctgatgtt ccgaaggtcg
     2821 cgcgcgttgc cggactcggt ataattaagc tagcgcaatt ctcggggcgg ccgatctatc
     2881 cggttgctgt tgcgaccagc aggcggatcg tgctgaataa ctgggatcgc tcagcgatca
     2941 acttgccgtt tgggcgagtt gccatcgtgg ccagtgatcc cgtcctggta ccgcctgatg
     3001 ccgacggctc tatgatggaa cagtgcagag ctatcgtcga gcaacggctc agccgagtga
     3061 ccgaccgcgc ctatgaaatc gtggatcgca aggatcgtca tgccgtccgt ggctgattcg
     3121 atgccgatga cgctgtctgc ctatcggctc gtcaccgcag caggcacgat gtttgcgcct
     3181 cgtttgcttg aacgccggat ggcgcgcggg aaggaaagcc ccgaccgcct tgccgaacgg
     3241 cgcggtgagc caagcgcgcc gcgcccaccg gggccgctcg tttgggtgca tggggcaagc
     3301 gtcggtgaat tcatcgccgt gcttcctgtg gtcgaacgca ttcgtgcccg cggcttcacc
     3361 gtgctgatga caaccggcac cgtgacgtcg gcggcgctcg cggaaaagcg gcttccttcc
     3421 ggcgcattcc atcagtttgt cccgctcgac gcgccagcgt tcgtggcgcg atttctcgac
     3481 tattggcgtc cggggctcgc cttgttcgtc gaatccgacc tgtggccaaa cacgattctg
     3541 gcggcgtccg agcgccatat cccgatgctc gtcgtcaatg gacggctgtc ggagcgctct
     3601 ttcacccggt ggcgccattt tcccaggacg atagaaacgc tgctgcggcg gattgatctc
     3661 tgcctggtgc gttcccccaa tgatgcggag cgtttccgca cgctcggtgc gccccgcatc
     3721 agtataaccg gcaatctcaa attcgatgtg ccggccctgc cggtcgacac ccgcaagctc
     3781 gccactttga ccgaggcgac caaaggacgg gttatcgtgg tcgcggcttc cacccatccg
     3841 ggtgaggaga gtgtgatcat cgatgcccat cgtcgtctca aaatcacata ccctgatatc
     3901 ctgacgatta tcgcgccacg gcatcctcag cgcggccctg ccattgcgga catcgccgcg
     3961 actgcacatc tgcgatcggc gctgcgctca acgggcgcat cgccggcagg cgatatcgat
     4021 atctatgtat tcgatacact tggagaattg gggctgatct accagcttgc accgattgtc
     4081 ttcatgggcg gctcgttggt gcgccatggc ggccagaatc cgatcgaggc gatcaagctt
     4141 ggagcggcga tcctgcacgg cccccatgta ttcaatttcg gcgaaatcta cgaagagctt
     4201 gaccgcacca ccgcggcgga gctcatcaac gacgccggta cgctgaccgc gcgaattgac
     4261 gcctggatca aagacggcgc cgaacgcgag cgcgccgccg agcgggctag gcgttacgtc
     4321 gacaaactcg gcggcgcgct tgacctgacg gcgtcggccc ttgagcccta tttcatgcag
     4381 ctgcggaatc aaagtcgcac cgctcatgcg tgacctcgcc ttttggtgga ctgaccgtag
     4441 cgccgccgca accctgcttg cacccctcgg cgcttgctat ggggcaatcg tggcgcgacg
     4501 catggcgcgg ccaggccgca aggcaccggt gccggtcatc tgcgttggaa atttcacctt
     4561 gggaggcgcc ggcaagaccc cgaccgctat cgcgcttgca cgacacctgt tggaatctgg
     4621 ccattgtccg ttctttctgt cccgcggcta tggcgggcgg gtcgcgggcc cggtccgggt
     4681 cgaacgtcag cgcgccattg aagtcggcga cgagccgctg ctgctcggcc gcgtcgcccc
     4741 gaccattgtg gcgcgcgacc ggctagcggg cgcgctggcg gcagccgaag gcggggccga
     4801 cgcaattgtc atggatgatg gactccagaa cccgtcagtt gataaggacc tcgccatcgc
     4861 ggtcattgat gggcgccgcg gtatcggcaa cggtcggata tttccggcgg gtcccttgcg
     4921 cgcgccgctc gaggcgcagc tcgatcacat cgatgctgtc ctcctggtgg gcgtggcagg
     4981 tcgtgcagcg caatgtgcga ttgacgttgc gcaaagacac gggctaccgg tgttccacag
     5041 cgagttacgt ccgcagccca gcgccgtagc ggcactcacc ggcaggccgg ttttggcctt
     5101 tgcggggatt gccgatcccg ccaagttctt tgccacgctg gaagcgtttg gcatttcggc
     5161 cacggtccgc aggccgttcc cggaccatca ctgctacacg gccgacgaga tggcggcgct
     5221 cgtggcctct gcccagcgag acggcctcac gctggtaacg accgaaaaag atatggtgcg
     5281 attgaatggc gttccggcgg ctgccgatct gatcgcgcga tcgacagtgt tgccggtgac
     5341 gctgacgttc caggatactg cagccgtgaa agctattttg cgcgacgcga tgcaaggcca
     5401 acgcaagccc gttaggccct aatcaatgta cccgcgcagc cgttggagca ctgccttcgg
     5461 gttggcatag gcctcctgac gctcgacgct ccaatatttc aattcctcga gcggaatcgg
     5521 ggttccagtc accgcgcaac gcacgaatgc gcccggacgc atgacccgga aatcaccgtc
     5581 aagatacttt acctccgctt cgccagccga aggcgaatag gggtcgaagc gattgagcac
     5641 cgataagctc ctggaatggt gcggcatgtc ggaccgcgaa acgaccattg cgaagatagg
     5701 gtttctcgcg ccgccgttaa agccatttct tgcctcgcaa ccggcaaccc gaccatcacg
     5761 ggtgacgcag tgagctccag ccgtaaatca tcagaatgtc agcccaatcc ggaatacttg
     5821 gacggcataa aaggcgatct cagcatcgag gcaacgtttg atgttggcag cctggcgaaa
     5881 gccgtgttgc tcgccagaga aaaggaaata accgacggca tttccattgc gccgcagcgc
     5941 ctcgaccata acttcggtct ggttcggcgg caccactgca tcctcggcac cttggaaaaa
     6001 gacaaccggc ttcgacagcc gatcggcgtg atggagcggc gaccgctcgc gatagcgcgc
     6061 ctccatttcc ggaaacggcc cgatgagcca atcgagatac cgcgactcga acttatgagt
     6121 atcgcgcgcc agtgctgcag cgtcgctgac gccgtaatag cttgcgccac cctggaaaaa
     6181 gtcgcgaaag gcgagggccg cgagggttgt gtagccaccc gcgctgccgc cgctgatgac
     6241 gacacgcctt gcatccacca atccccgttg ggtcaggaac ttggcgccat tcacgcagtc
     6301 gtcgacgtcg acgacacccc aattcaactt cagcctctcg cggtattcac gtccgaatcc
     6361 cgtactgccg ccatagttga cgtcaagcac cgcaatacca cggctggtcc agaactgcgt
     6421 gccgagattg agtgtgcttg atgccgagga ggtcggacca ccatggcact taacgagcag
     6481 gggcggtcgc tcctcggcgc ggccgacgta gccgcaattg tgtggcggat agaacaatcc
     6541 aaacgctgtc ttgccaccgg tggtggggaa ttcgaccggc tcgaccttgg tcaggtagct
     6601 ggcaatccgc agttcgctgc ggccgagcag gtcggtcgcc tgtttgaggg tccgacattg
     6661 gccagattgc aggtcgagtg atacgatcga cgttggctgg tccggggcgc cgccgcgaaa
     6721 caccacgcgg ctacggtcgg cgcgaatcga tccgaattcc gtgaatcccg tttcaatcgc
     6781 ctgcagggtt gcggtcgtca aatccaacac cgcgagttgc ccaagcccgt ccttcgtgta
     6841 ggcacacacg atccgccggg catcggcgaa tgcgtaagtc gacataccga gattccattg
     6901 cggcatgccg aactccgccg tcatcggaca aagcggccgt gtcgccgcgg taccgacgtt
     6961 gtaggcgtag agattccacc agccggtgcg gtcggaaaca aagatgatct ctttgccgtc
     7021 gagcgaccat tctggttgga ataccgattc agccacaccg cccgcgatga tacgcgcgcc
     7081 cgcgggcgcg ccatcggcgt cgatgtcagc gagatatagc gtggtcccgt tccacggcat
     7141 gttgggatgg tcccaggcga gccacagcat cctgctggca tccggtgaca agcgcgccgt
     7201 gcagaagaaa tcatgtccgc ctgctagcat gcggcctggc gaagcgccgg gacggtcgag
     7261 atcgatcgcc acaatggcgt tgacgggttc gccgtcgccc gaatggtctt cgcgtacgcc
     7321 gatccagcgc cgtcgccgct ggtcaagcac gccgtcgctg tagcgccaat ggcgttcgcg
     7381 gctcgaaggc tccggggtca gaggttccgg gacggccgaa ttgcctagct gacgatacag
     7441 ccgttgatcg gcaaaattag aaaagatgca agtcccgtcg gccaccagcc acgacgctcc
     7501 gccatattca tggacgcgcg tgcgaacatt gaatccgacc ggcgtaatgt ccctggcaat
     7561 gccgtcagga ccggcacgca caatcacatt gcggccttgc tcctggggcc gcccttcgag
     7621 ccagcaaata tcatttccgt caagacgcac ctccgagagc atcgtggact gggccacgat
     7681 gaggtcggac gtgatcggcg atttccacga cccatagggc gcggttttga ttgctggcat
     7741 tcgaaaaaca acccctaatt ctgcgggtcg agccgccgga atctctgaat gcgctgtccg
     7801 gtgttcactt cagcggtgta gatgttgcct tggtgatcga ccgtgacatt atgtaaagcg
     7861 atgaattggc cggcctgacg gccgacgcgg ccaaatcgcc ccaacacctc tttggtgccg
     7921 tgatcgacga tgcggacttc gccattggcg ccgtcgatca tgtagatgaa cttctgctct
     7981 ttgtcgggtg agaacacgag ctcgtagacc gagcccgtgg ccagcgtgtt cttctcgtag
     8041 aaatgctccg acacgaacgt gccgtctttt cggaagatct ggacacgatc attggtgcgg
     8101 tcgcagacat agacgaggcc gtccttgtcg aaacggatgc agtgtacggg attgccgaat
     8161 tgctgggacg gcggtttcgc tggatcgtac ggcggcgttt tctcatcgct tggcttcttg
     8221 ccgtaagcac cccaatggcg cttgtaagcg ccggtttcag aatcaaacac cgcgaccctt
     8281 cgattggcat agccgtcggc agcaaatacc tctttggcgg cggcgtcgac cgcgatatcg
     8341 gccggcgagc cgagccgttc ggtcgaattg ctatcattgc cagtgcccga cttgccgatc
     8401 tgcagcacaa acttaccgtc catggtgaac ttgagaagct ggccatccgg tttgccgctg
     8461 ccggcaagcc agacaaaatc gttgtcgtct atgaagatac cgtgttccgt ctccggccat
     8521 tgatagccgg ggcccggccc gccccatgcg cgcaataaat taccagattg gtcgaatacc
     8581 aacacgggcg gggccgcagc acaacacttg gatgggggag gattctgctc ggcagcgcgc
     8641 tcacgaggcg tcagcgaatt cggtcgttgg acaatccaga tgcgatcgaa ccgatcgacc
     8701 gtgatgccgg cgacctgacc gagaatccaa ttgttcggca gcggcttcgg ccatagggca
     8761 tcgacctgga actgcggaat ggcggccgat gttgtggtct ttgcatcttg tgccgtggcg
     8821 gtgagcggcc ccgcaagaat tgcgatggcg gcgagcgagg caataacagc gcatttcatc
     8881 ccttcctccc atattccaga atccaggcct tcgatcttca gattagagcc accggcttga
     8941 cacaaattgg gcatgcgacc aacccgaccc actgcgttcg tgagggttca ctccgtcgaa
     9001 ccggctcttt ccggcgtctt tggcaagaac gcctatccga attttcattc ccagagttcg
     9061 tgttatacaa cctagcaaac cactcgggta cacgcatatg cctcacggcc ccgctttgtt
     9121 tgctttgtcc ttcgccttgg tgttcttgct tgctggcagc atcgcggaag ccggcggtcc
     9181 ggagtcggtc gaattcggca acggggacgt caccctgaaa gcaattgtgt accgccccga
     9241 aggcaccgga ccgttcccgg ccgttatagg aatgcatgat tgttccggtt tgaccaattc
     9301 ctcaggggtc gtcgccagca aataccgcga atgggcacag ttgctcgtca agagtggttt
     9361 tatcgtgcta ttcccagaga gctatggctc acgcggaatc ggcaatcagt gtaccgcccg
     9421 caatcgtccg gtacgtccgg atcacgaacg agtcgcggac gccaacgcct cacgacagtg
     9481 gcttgacgaa cagcccgatg tgcggaccga ccatatttca ctgcttggtt gggcaaacgg
     9541 cggcagcagc gtgttgtgga ccgtccgtcc gcagcgcaag accgacgata aacccgactt
     9601 tcggtccgcg gttgcgcttt atccgggctg ccgccgcctc gattcgaccg cttggagcgc
     9661 gcgggtgccg accctgattc tgatcggcgc tgcggatgat gtgacgtcgt cacaggattg
     9721 tgaacatatg gttgcgggcg ccaaaggtcg cagcgcacgg attgccatca cggtttatcc
     9781 gggcgcattt catgactatg atcatcctaa tcgcccgccg caggtgcgca ccggctatgc
     9841 ggtctcggct gacggatcgg gacgcattca cactggcacc aacaccgctg cgcgtgcgga
     9901 ctcgctcaag cgtgtaccgc agtggttggc acggtgatcg cgaaactaaa attccgtgca
     9961 gccgtcgcgg ctctcgcggc tgcaatctca ggccaggccg ctgctgacga tctgctccgc
    10021 ctggccatcg gtcagcgcgg cctgtgggac tcttccatcg cggaaattgg ccaggcggcc
    10081 ggcatctttc gccgtcgtag ccttgaattg cagactgtat atacgtcggg cggcggcgag
    10141 acccagcagg cggtgatttc cggcagcgtc gatatcgggg tcgcggccgg aacgttgggt
    10201 gtgctcggcg ccttcgccaa gggcgcgcca attcggatca tcgccggcga agcgaccggg
    10261 accgccgaat actatttcgt gcgatcggat tctccggttg gtaaagactt cgccggcgtg
    10321 acccccaaca tgacgctcgc ctactccacc gccggctccg gcacccacat aacggggctg
    10381 cgcttcatga aggagcgcaa tttcaccgcc aagctcaccg cgaccggcag cgtgccggcg
    10441 actttcaccc aggtgatgtc cggccaggta gacatcggct tctcgacccc gccattcggc
    10501 cttgacgcca tcgaggcggg ccagatccgc ctcatcgcgc tcgccaacga tctgccgagc
    10561 gttcgcaatc agaccgtgag ggtcatcatc gccaatgcga ccgatctcgc ccgccggcgc
    10621 gaggtttatg accgtttcat ccgcgcctac ggcgagacca tcgagtggat gtatgcagat
    10681 gaccaggcga ttgcggcatt cgcccgatat gcgacgattt cgtccgccat ggcgcgacgg
    10741 gtgcgcgaca atttctatcc gaaggcgatg ctgcagctcg atcgtgtgat gggcctcgcg
    10801 gagttgatcg aggacgccat agcgttcaag tatgtcgcgc aggtgttgac cccggcgcag
    10861 accgctgagc tgttgcaaat gccgatgcga ccgtagggac ttgcctcgcg gttagaatt
//
LOCUS       DATILV010000344         4444 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_850659, whole genome shotgun sequence.
ACCESSION   DATILV010000344 DATILV010000000
VERSION     DATILV010000344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4444)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4444)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4444
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_850659"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(344..1054)
                     /gene="otsB"
                     /locus_tag="VLJ17_07800"
     CDS             complement(344..1054)
                     /gene="otsB"
                     /locus_tag="VLJ17_07800"
                     /EC_number="3.1.3.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004805 - trehalose-phosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-phosphatase"
                     /protein_id="HSV22917.1"
                     /translation="MLDVDGTILDTASTPSSVIVPSSLRSSLEKLHARTGGALALVSG
                     RLIRNLDALFKPLRLPAIGGHGAEMRLASAEVTRRRGNNTIDGALRSLIAAAATSDPR
                     VVLEDKGSSLAVHYRLAPWMEQTLRTKIASIITRVGPEDVEIMHGKAVIEIKSTHFNK
                     GEAVREMMTNVPFARRQPVFIGDDTTDASVFSVLPTLGGIGYSVERPIPGAIGAFDSP
                     KDVRCWLASLVHHEERRQ"
     gene            complement(1319..1681)
                     /locus_tag="VLJ17_07805"
     CDS             complement(1319..1681)
                     /locus_tag="VLJ17_07805"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV22918.1"
                     /translation="MEDESLIAMMMERSLRDFDFDVVGPFGTVREALVAIDREPIDAG
                     ILDINLGGEMAYPIAQILRARKVPFVFMTGYGTEAVTAPFPDVQIFRKPLERDMLHSL
                     FVARAADSVSTMAPVIMK"
     gene            complement(1799..3208)
                     /locus_tag="VLJ17_07810"
                     /pseudo
     CDS             complement(1799..3208)
                     /locus_tag="VLJ17_07810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044363.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HWE histidine kinase domain-containing protein"
     gene            complement(3216..>4444)
                     /locus_tag="VLJ17_07815"
     CDS             complement(3216..>4444)
                     /locus_tag="VLJ17_07815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV22919.1"
                     /translation="QDDPTVAVVDDRQDIHAGDLILLIVDDDPHYARIMAGIARDEGF
                     KVLAATNGRDAINLAKQFRPTAISLDIFLPDTLGWTVLSQLKLNPLTRHIPVQIITLE
                     NNRQHGLARGAFSFATKPMTADGIGAMMRRIREYTKPRRKRLLVVDDNAAEQVCIGEL
                     LAHDDLEIVVVETGAAALQVLRDQEFDCVVLDLQLPDMSGFQVLEQIKVDPTLSDLPV
                     VVFTGRELSAEEDVRIRAIARSAVVKGVESPERLLDETALFLHRVVTELPLEKQRVLE
                     RLNTSDEDLIERTVLLVDDDARNIFALSSLLERRGMHVLTATTGAEALEIIESTPHIA
                     IVLMDIMMPKMDGYKTIERIRQKHRLSRLPIVALTAKAMKEDREKCLAAGASDYLAKP
                     VNTEQLLSTLRMWLHR"
BASE COUNT          897 a         1348 c         1242 g          957 t
ORIGIN      
        1 ccttgccgct ccatccgagc cacacgccac cgttatgctg gagcgccggc cgcaaggcga
       61 cctcgagccc tccggcacgc ttggcaccat ccccggaggg aaccgaaacg cgattcgaga
      121 cgaccactag tcgtgccaat accgataccg atcctcccaa ttccacgaca gacgcatggc
      181 gtctcgccag aacccgtaca taacgagtgc cgagcccagc agtctgaaat caccttcacc
      241 cacatgtata acgtgcttgc cccgcaaaag ttcacgttcg atcgcggcgc cagaaaagcg
      301 tccacgtgac tgctgtggat tgtcagatcg agtccgaaac cggtcattgc ctgcgttcct
      361 cgtggtggac caagctggcg agccaacagc ggacatcctt tggggagtcg aaggccccaa
      421 tcgctcctgg gatcggtcgt tccaccgaat agccgatacc gccgagcgtt gggagcacac
      481 tgaaaactga cgcatctgtg gtgtcgtcgc caatgaacac cggttggcga cgggcgaagg
      541 gcacgttggt catcatttcg cgcaccgcct ctcccttgtt gaaatgggtc gacttgattt
      601 cgattacggc cttgccgtgc atgatctcga catcctcagg gccgacgcgc gtgatgatag
      661 aggcgatttt cgtcctaagg gtttgctcca tccatggcgc caatcggtaa tgcaccgcca
      721 atgaggagcc tttgtcttcc aggacaacgc gcgggtcgga tgtcgccgcc gctgcgatca
      781 agctccgcaa cgccccgtct attgtgttgt tgcctcgcct tcgcgtgacc tcagcgctgg
      841 caagtcgcat ttcggcgccg tggccgccaa tggcaggcag tcgcaacggc ttgaacaagg
      901 cgtccagatt gcgaatcaaa cgaccgctga ccaaggcgag agcgccaccg gtcctggcat
      961 gtagtttctc aagcgaggag cgcagtgagc tcggcacgat gacactgctc ggcgtgcttg
     1021 cagtgtcaag gatagtgcca tcgacgtcaa gcaacaacgc aattgctccg atatcgtatg
     1081 atcgcggcag ttgaggttcg cttgacaatg caggtgcaac gacagttggt tgcatcggag
     1141 gggacttagc cctcggggat tgcccatttg tgccgcaaaa tgcgttcatc gcttcgcctt
     1201 gcctactctt aatgcacgat cgggtatcgc gttccaatgc gatcggcgtt tgtgatcatt
     1261 gagagacgga ggatttccgt cgacacgcgg cgcctatttt ggaggccgcc agcccgtgct
     1321 acttcataat tactggtgcc atcgtggaga ccgaatccgc agcgcgtgca acgaatagac
     1381 tatgtaacat gtcgcgttcg agcggcttcc gaaatatctg tacgtccggg aagggcgcgg
     1441 taacggcctc cgtgccgtat ccggtcatga agacgaaagg tacttttcgt gcgcgcaaga
     1501 tttgggcaat gggataggcc atttcgccgc caagattgat gtcgaggatg cccgcgtcga
     1561 taggctctcg gtcaatggcc acaagcgcct cgcgaaccgt gccgaacggc cccaccacgt
     1621 caaagtcgaa gtcgcgaagg cttctttcca tcatcatggc gatcagactt tcgtcctcca
     1681 ccaacagaat gcgcttgcgg cgcccgcccg cgaccggagc ggaactgata gctcctggtt
     1741 tcggaacaga ggtctcgact ttttcggcat ggtccggatt ctcatgatgc gggaaggaaa
     1801 tggtgcaaca aaggccgtcg cgccgccaat cgaattcgac gtcgccgccg agctgcccct
     1861 cgacactggc cttgatcacg cgagttccga atccactcac cgtctgttcg atcgcaggac
     1921 caccgctttc ggtccaccgc aactgcagcg tgacccccgt caattcccag gctacgtcga
     1981 ccttgcctga aggcagtgac aacgcgccat atttggcggc gttggtggca agctcatgaa
     2041 gcgctaacgc aagcgcttgc gcagtagagg gattgagcga taggctctct cccgaaatcc
     2101 ttacccggtc gaaattcgtc gcgcgataag gcgcaagctc ttcctcaatc agttccacga
     2161 tgttggcacc gcgccagcgg gattcggaca gcaggcaatg agctcgcgcc agggcctgga
     2221 tccgcccctc aaccgtggcg acgaattgct tgatgttatc ggcgcgagtc agtgagatga
     2281 tcgcctgcat gactgcaagc gcattcttgg cgcgatgatc aacctcgcgc gcgaggagca
     2341 attggcgctc ctccgtctcc ttgcgatccg tgatatcgat ggtcacgcca ctgatgcgcg
     2401 aaacgcgact gaacgcgtct ctgcttgccg cggcagtgcc aagacaccac cgtatcccac
     2461 cgtcagggtg gcaaatgcgg aattcaatct gatgcgaacc ggcatccttt cgcgcctgtc
     2521 tgactgcttg tcgcactatt ttccagtcat cgtgatgaat cagcttgcgg aagcttgctg
     2581 gcgtgatctc gaatgatgcc ggatcgacac cgaatattcg tttctgcccc tcgtcccagg
     2641 cgcagtcgcc ccggactaag tcccaatccc acgatcccat ctttcccgcg gcgagcgcaa
     2701 tgttgcggcg ggcttcgctt cgctgcaggc gccgcgtcga gcgttccaac tcagccgtcc
     2761 gctcgcggac tcgccgttcg agttcggcat tgacctgctc cagttgccgc gatttccggt
     2821 acagttcgac aaaaatcctg actttagcgc gcagcatctc tggaaccatc ggcaccggaa
     2881 catagtcgac cgcgccgatc tcgtaaccgc gtagccgatc gacgtcagtc aaatgaatcg
     2941 cggaaatgaa gatgatggcg gtcttagtaa aacgcggatg atcgcggatc attgcagcaa
     3001 gttcgaatcc gtccagctcg ggcatgcata catcgatcaa cacgactgca atgtcggtct
     3061 tgagcagatg ttccaacgcg gctcggccgg acgacgcttg aatcaggttc tcgcctaact
     3121 cgcgcaaaat cacctcgtag ctcgccagct tcgctggctg atcgtcgacc aaaagaatgt
     3181 tcacttttcc gtcgttgggc atcatcattc cccgttcagc gatgcagcca catacgtagg
     3241 gttgacaaca gctgttcggt attgaccggc ttggccaaat agtcggaagc gccggctgcc
     3301 aaacactttt cgcggtcttc tttcatcgcc ttcgcggtca gggcgacgat tggcaggcga
     3361 ctcagtctgt gcttttggcg aatcctttcg attgttttat atccgtccat ctttggcatc
     3421 atgatgtcca tcaggacgat ggcaatgtgg ggtgtcgatt ctatgatctc cagggcctcc
     3481 gcgccggtgg tcgcggtcag tacgtgcatc cccctgcgct ccagcaggct gctcagcgcg
     3541 aagatgttgc gagcgtcgtc gtctacgagg agcaccgtcc gctcgatgag gtcctcatcc
     3601 gaagtattga gccgctccag cacgcgctgt ttctccagcg gcagctcggt cacgacgcga
     3661 tgcagaaaca gcgccgtttc gtcgagtagc cgctccggcg attcgacgcc cttaaccacg
     3721 gcgctgcggg ctatagcgcg aattcgcacg tcctcctcgg ccgatagttc ccgccctgtg
     3781 aaaaccacaa ccggcaagtc cgacaatgta gggtctacct taatctgttc gagcacctgg
     3841 aagcctgaca tgtcgggaag ctgtaggtcg agcacgacgc aatcgaattc ctgatctcga
     3901 agcacttgca gagccgcggc tcctgtttct accacaacga tctctaaatc atcgtgggcg
     3961 agtagctcac cgatgcacac ctgctcggcg gcgttgtcat cgactaccag cagccttttg
     4021 cggcgcggct tcgtatattc cctgattcgg cgcatcatcg caccgatccc gtcggcggtc
     4081 atcggcttgg tggcgaacga gaacgcaccg cgagcgaggc cgtgctggcg attgttctcg
     4141 agtgttatga tctgcacggg aatatggcgt gtcagcggat tgagcttgag ctgactcaat
     4201 accgtccatc ccagagtgtc tggcagaaag atgtcgagcg aaatcgcagt cggtcggaat
     4261 tgcttggcga gattaattgc gtcgcgaccg ttcgttgccg ccagaacctt gaagccctca
     4321 tctcgggcaa tgcctgccat gattcgcgca tagtgcggat catcgtctac gatcagcagg
     4381 atgaggtcac ctgcatggat gtcctgccga tcgtcgacca cagccacagt tggatcgtcc
     4441 tgca
//
LOCUS       DATILV010000345         8724 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4935483, whole genome shotgun sequence.
ACCESSION   DATILV010000345 DATILV010000000
VERSION     DATILV010000345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8724)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8724)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8724
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4935483"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(363..2246)
                     /locus_tag="VLJ17_07820"
     CDS             complement(363..2246)
                     /locus_tag="VLJ17_07820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HSV22920.1"
                     /translation="MRGTRFELYLATTAIVLVAAGSSLPIESAPLTESEISEAVPMPE
                     PANLPPPTATDIARPVLPELSTVPAPAVAVPEIATPAVAAPAASVQTETPALTIDQRV
                     AEKLRDMLGARTDRFIERKNKAAVEAFYAARSYAPIWVENGARSERGKAAAIYLAGVD
                     ADGLDPSDYQLPSFANTDAGALAEAELKFTATILTYARNAQIGRVHYSRVSADVFYDL
                     VAPEPGAVLTKLADAKDIAAALDGYNPPQPGYKALKAKLAEMRGRTSDMGHSGRTRIS
                     SGQTLKPGMEDQRVPLLRERLGIGDRDTNTTYDKVLAEAVKKFQRQRDLAPTGNLNNA
                     TVDALNGPRRDRDSDVIIANMERWRWLPRDLGRAYVMVNIPDYTLKVVDHGSMVWTTK
                     IVAGQPGERATPLLSETMKYITVNPTWNVPQSIINNEYLPALAQDPTVLDRMGLKLEY
                     NRDGSVHIYQPPGEANALGRIRFNFPNKFLVYQHDTPDKHLFAKDKRAFSHGCMRVQF
                     PDKYAEVLLNIANPKDGYTIEKIHRMYGTGERDIQLTVPIPVHLTYQTAFVDEAGHLV
                     IREDVYGRDARLLAALKGEDRRIADVPVERREASISTRRQSARMPMPFPTPNSFFFGG
                     LFR"
     gene            complement(2422..3990)
                     /locus_tag="VLJ17_07825"
     CDS             complement(2422..3990)
                     /locus_tag="VLJ17_07825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSV22921.1"
                     /translation="MVERVLIVDDDPVQRRLIENIVGKAGYETASVDGGEAALKAMLA
                     TESTYDCIVLDLVMPELDGLGVLGRMREAGLEIPVIVQTAHGGIDSVVTAMRAGAVDF
                     VVKPVSFERLSVSLRNAMAARALAGEIARQKRSRSGTLTFRDIITRSPKMHAVLRVAQ
                     KASSSAIPVLIEGESGVGKELIARAIHGSGERRTKSFVAVNCGALPENLVESLLFGHE
                     RGAFTGAAERHDGKFVEASGGTLFLDEVGELPPAAQVKLLRVIQDGEVHPVGGKKPIK
                     VNTRIISATNRDLTSDVKSGRFREDLFYRLHVFPIAVPSLRDRAEDIPELTRHFLVRF
                     AAEEGKRIQSMSAEALNMLALFHWPGNVRQLENAIFRAVVLADGEELTSREFPQIAAK
                     IGDSNAGPRRITTQMHVTLAPSDDTDAQLLCQPNMGRAATEVQLRPGDDAGPGYSLIS
                     AAPSGSRSMLNLFNADGDVRSLEDIEAEVIRFSLIYYNGRMSEVARRLRIGRSTLYRK
                     LEVLGCGMADNTNA"
     gene            4399..5217
                     /locus_tag="VLJ17_07830"
     CDS             4399..5217
                     /locus_tag="VLJ17_07830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22922.1"
                     /translation="MSSESSEILHTLRRTVATGVPVEDSRLVSFGVASLDQALAGGLA
                     CGALHEIGPAASLQGGAATGFTMALAARALGGPRGQAVWIQTDFTVTEAGALYGLGFD
                     FMGLSMDRLVVLRVPRPRDALWAMEETLKCRAVSAVVAEFASEEADLTATRRLALAAR
                     AGGGLGLILHLNTTPDAKLPCGQPSCQPTAATTRWEVASACGERDRFGGFGPTTFALS
                     LVKNRRGRTGQWRLSWDHHEYAFATSLSLPVAPSARDGSHRNESPHALFRLRAG"
     gene            5189..6787
                     /locus_tag="VLJ17_07835"
     CDS             5189..6787
                     /locus_tag="VLJ17_07835"
                     /inference="COORDINATES: protein motif:HMM:NF013015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase Y family protein"
                     /protein_id="HSV22923.1"
                     /translation="MRCSAFAPDEPLAVTRQVKNALRIVAMNDAAQDLGVRTGMPLAD
                     ARAMYPALAVVESDEAADRRLIEDVADWCDRYTPLVGIHAPDGLVLDIAGCARLFGGE
                     AAICHDILARLADQGLHARAAIADTVGCAFAVARFGGASPFPTEGEGEGTFLVPPDGM
                     RRSLASLPMAALRLAPAIVEALAELGLRRIADVIDLPRAPLAARFGEILVRRLDQALG
                     REDEPITPRLPVPSYVAEQSFPDPIGHERDVLGTIRRLATQLGIAMEQRQDGTQLLQV
                     ALFRTDNKVYRIEVGTGAPVRDAALIERLFADRLAVIGDACDPGFGFDMVRLAALVVE
                     RSEPVQSGFSQMGEFGELTGTDDEEFSHLIDRLDARFGPRRVTRLVEQDTHIPEFAVA
                     AGPVGRRQRTDDKQTTEVRGRMHGLLHPSSVICPPSPDTLDSLSPTRPVRLFRRPEPV
                     EAIAEVPDGPPAQFRWRRVLHEVAAAEGPERIAMEWWHDADGHTRDYFRVESREGLRA
                     WLYREGLYGCAAPAPRWFLHGLFG"
     gene            6804..>8724
                     /locus_tag="VLJ17_07840"
     CDS             6804..>8724
                     /locus_tag="VLJ17_07840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020176690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HSV22924.1"
                     /translation="MKACGMPAYAELAVTTNFSFLYGASHGEELVERAKELGLAGLGI
                     ADRNSVAGVVRAHQAAKNAGLKFAPGTRFVFADGTPDILAYPQDRAAWGRLTRLLTLG
                     KRRAEKGQCLLTYDDLIAHIAGLNLIVLPGRLQQARSAPRVPCFETAVEPVIGPAKGR
                     TRWRPPQVFDKMKPHPEEPIEGRRLEGWNAARSVTPPKTFANSQLVAFLLHLREAAPH
                     AVWLGASMLYRGDDARRLARFAAIAGEARVPLIAVGDVIYHIPKRRALQDVVTCIREH
                     LTLATAGRRLEANAERHLKPPHEMVRLFRDAPETLAQTLCFLERCQFSLDHLKYEYPD
                     ETREGFATPQEALVAYTDEGARQRYPGGIPAKVGVALDHELALIAELKYAPYFLTVHD
                     IMRYARSQEILCQGRGSAANSVTCFCLGITEVDPERVDLLFERFVSAERREPPDIDVD
                     FEHERREKVIQYIYERYGRHRAGLAATVITYRTRSAIREVGKVFGLSDDTVGALTGML
                     WGSSGEAISEQQARRAGLDPTDPHLAKVLALTRELIGFPRHLSQHVGGFVITRGRLDE
                     VVPIENAAMEERTCVEWDKDDLDAINILKIDVLGLGMLSCLRRGFDLLNKHYALLPPP
                     PSGRAIAYGSPPPGGG"
BASE COUNT         1614 a         2785 c         2626 g         1699 t
ORIGIN      
        1 gagcaatatc atcaaggccg ccagccccgt gcattgcccg gtgcgcgcgg ataaggctgc
       61 ggtcaataat tggcgtccaa agctaacagg cactggcgat cccgcgtccc cacacgctct
      121 cgaaatcacc ggctggcaag acccaccaac cttccgccca taagatcacg ggcggttgag
      181 agagcagtta gaattctacc gggatcggtt acggcaccat tggtgccgcc cattccccca
      241 ccacaaccct ggagttctat tcagaaagta tggcaaaaaa aagccagccc gggaaccccg
      301 ggctggccaa ttatctaatc ggtagaaatg cttatccaca ccctcagtgt cacaacggaa
      361 cgttatcgga ataagccccc gaagaagaat gaattggggg tggggaacgg catcggcata
      421 cgggcgctct ggcgccttgt cgaaatgctg gcttctcggc gctcgaccgg cacgtccgca
      481 attcgcctgt cttcgccctt cagagctgcc aacaaccgag cgtcacgccc gtagacatct
      541 tctcgaataa caagatgacc ggcttcgtcc acgaacgccg tctgataggt gagatgcacc
      601 ggaattggta ccgtgagttg gatatcacgc tcgccggtac cgtacattcg atggatcttc
      661 tcgattgtgt agccgtcttt tggattggcg atattgagca acacttcggc atatttgtcg
      721 ggaaactgga cccgcatgca gccatggctg aaggcgcgtt tgtctttcgc aaacaagtgc
      781 ttgtccggcg tatcgtgctg atagaccagg aatttattcg ggaagttgaa gcgaatgcga
      841 cccagcgcat tggcctcgcc cgggggctga tagatgtgca ccgagccgtc ccgattgtac
      901 tccagcttga ggcccatgcg atcgagcact gtcggatcct gtgccaaggc cggcagatat
      961 tcattattga tgatcgactg cggcacgttc caggtggggt tgacggtgat gtatttcatc
     1021 gtctcgctga gcagcggcgt ggccctttca cctggttggc cggcgacaat cttcgtcgtc
     1081 cacaccatcg agccgtgatc cacaaccttt aaggtatagt cggggatgtt caccatcaca
     1141 tatgcccgac cgaggtcgcg ggggagccac cgccatcttt ccatattggc aatgatgaca
     1201 tcgctatccc ggtcgcggcg gggaccgttg agagcatcga ccgtcgcgtt gttcaaattg
     1261 ccggtcggcg ccagatcgcg ttggcgttgg aatttcttga cggcctcggc cagcactttg
     1321 tcataggtcg tattggtgtc acggtcgccg atgccaagcc gctcccgcag cagcgggacg
     1381 cgctggtctt ccatcccggg ctttaaagtc tggccagaag aaattcgggt gcgaccgcta
     1441 tggcccatat cgctggtgcg gccgcgcatc tcagcaagtt tggctttgag ggccttatag
     1501 ccgggctgtg gcggattgta gccatcaagc gccgccgcaa tgtctttggc gtcagccagt
     1561 ttggtcagga cggcaccggg ctccggtgcg accaaatcat aaaagacgtc cgcgctcacg
     1621 cgcgagtaat gcacgcgccc gatctgcgca ttacgcgcat aagtcaggat agtcgcagtg
     1681 aacttgagtt cggcttccgc caaggcacca gcatccgtat ttgcaaagct gggaagttga
     1741 tagtcgctcg gatcgaggcc gtcggcgtcg acgccggcaa gataaatcgc ggccgccttg
     1801 ccgcgctcac tccgagctcc attctcgacc caaatcggcg cgtagctacg cgccgcatag
     1861 aaggcctcaa cggcagcctt gtttttcctc tcgatgaacc gatcggtcct ggcgccgagc
     1921 atgtcgcgca gcttctcggc gacccgttgg tcgatcgtca gcgctggggt ctcggtttgg
     1981 acagaggccg ccggtgcggc aacggcgggg gttgcgatct cggggaccgc gacagctggg
     2041 gcggggaccg tcgacaattc ggggagcacc ggccgagcaa tatcggtggc agtgggaggc
     2101 ggcaggttcg cgggctccgg catcggaact gcctcagaaa tctcggattc ggttagagga
     2161 gccgactcaa tcggaagact cgatcccgct gcgaccagca caattgcagt cgtggcgaga
     2221 tagagttcga aacgggttcc acgcattgca aattcctaac ttggtacggc aagagccccg
     2281 taaagtgtat tcgtcgccgg aagcctccgt aaagttcatt tacgacacaa attgatcaaa
     2341 atttatcgag catttacaaa cctcgcacgc ttttcttcgc aaatcacgtc gtttttgtcg
     2401 cgagtgtcac cacgtcgcaa ctcacgcgtt ggtgttgtcg gccatcccac aacccaggac
     2461 ctccaacttg cgataaagcg ttgagcggcc gatccgcagc cggcgcgcca cctcagacat
     2521 ccgtccgttg tagtagataa gtgagaacct gatcacctcc gcttcgatat cttccaatga
     2581 acgaacgtcg ccgtcagcat tgaacagatt gagcatggat cggctgcccg agggggcggc
     2641 agatatcaag gagtaccccg ggccagcgtc gtcaccaggg cgcagctgca cttcggttgc
     2701 ggcgcgtccc atattcggtt gacatagcag ctgcgcgtcc gtgtcatcgc tcggggccaa
     2761 tgtcacgtgc atttgggttg tgattcgccg aggccctgcg ttggaatcgc caattttggc
     2821 tgcgatctgg ggaaattctc gactggtgag ttcctctccg tccgcgagca cgaccgcgcg
     2881 gaaaatggcg ttctcgagtt gccgtacgtt tccgggccag tgaaagagtg ccagcatgtt
     2941 tagcgcttcg gccgacatcg actggatgcg cttgccctct tcggccgcaa accggaccag
     3001 gaaatggcgg gtgagctccg ggatgtcctc ggcgcgatcc cgcagggatg gcaccgcgat
     3061 agggaatacg tgcagtcggt agaacaggtc ttcgcgaaac cggccggatt tgacgtcgct
     3121 tgtcaggtcg cgattggttg ccgagatgat tcgggtattc accttgatag gctttttgcc
     3181 cccgactggg tgtacttcac cgtcctggat cacgcgtaag agcttgacct gtgcggctgg
     3241 aggaagttcg ccaacctcgt cgaggaacag tgtgccaccc gacgcttcga cgaatttgcc
     3301 gtcatggcgc tcggcggcgc ccgtgaaggc gcccctttcg tgaccaaaca gaagcgattc
     3361 aacaaggttc tcaggcaatg caccgcagtt cacggcaacg aaagacttgg tgcggcgctc
     3421 gcccgaccca tggattgctc gcgcaatcag ttctttgcca acgccggatt cgccttcgat
     3481 cagtaccgga atcgcggaac ttgaggcttt ttgggcgacg cgcagcacag catgcatctt
     3541 ggggctgcgt gtgatgatat cccggaacgt cagagtgccg ctgcggcttc gcttctggcg
     3601 ggcgatttct ccagcgagcg cccgcgccgc catggcgttg cgcaacgata ctgaaagccg
     3661 ctcgaagctg accggtttga cgacgaaatc gacggcgccg gcccgcatgg cagtgacgac
     3721 actgtcgatg ccgccatggg cggtctggac aatgaccggt atctcgagcc cggcttcccg
     3781 cattctgccg agcacgccga gaccatcgag ttccggcatc acaagatcga gcacgatgca
     3841 gtcatacgtg ctctcggtcg cgagcattgc cttgagagcc gcttcgccgc cgtcgactga
     3901 cgccgtttcg taaccagcct tgccgacaat attttcaatc agacggcgct gtaccggatc
     3961 atcgtcgacg atgaggacgc gctcgaccat ggggactcca aatcgcctgc gagagagcag
     4021 attgtctcga atcggggcat agtctccgat cagcgttaac gagccgtgaa ggacacgatt
     4081 ctcgtcgcgc tcgcgcgccg accgcagggg tccttttacc gcagtgacca ttcccccgac
     4141 gatgcagaac gcaatccagg cgatctcccg aaaggttgac ctttaggccg gcccgacttg
     4201 aagccgagag ctggctgaaa gcaatagaac cacgccggag cctctcaagc gcgttgcccc
     4261 aggggcagcc agcggcggcc gagtgttggc tgtggcggaa ttccggaagc cgagatcggc
     4321 aaacaggcgc gtcttgacat cgggggtaac ttggaggagg ctagaacaaa acatgaacac
     4381 agataaagac gccggcccat gtcctccgaa tcatccgaaa tcctacatac gctacgccgc
     4441 actgtcgcga ctggcgtgcc agtcgaggac agccgtctgg tcagcttcgg ggtcgcctcg
     4501 ctcgatcagg cgctggccgg cggccttgcc tgcggggctt tgcatgagat cggccccgca
     4561 gcttcgctgc agggcggcgc ggcaacaggc tttaccatgg cgctggccgc gcgtgcacta
     4621 ggcggcccgc gcggtcaagc ggtatggatc cagaccgatt tcaccgttac cgaggcaggc
     4681 gctctttacg ggctggggtt cgatttcatg ggcctctcca tggatcgcct cgtcgtcctg
     4741 cgcgtaccgc gcccgcgcga tgccctatgg gccatggagg aaacgctcaa atgccgcgct
     4801 gtgagcgcgg tcgtggccga gttcgcgagc gaggaggccg atctcacggc tacgcgccga
     4861 cttgcgctcg ccgcccgtgc aggcggcggg ctcggcctca tccttcatct gaacaccacc
     4921 cctgatgcca aacttccttg cggccagccc tcttgccaac ccaccgccgc gacgacgcgc
     4981 tgggaggtcg cgtccgcctg cggcgagcgc gaccgtttcg gtggattcgg cccaaccacc
     5041 ttcgcgcttt cgcttgtcaa aaaccgtcgc gggcgcaccg gccagtggcg tttgtcgtgg
     5101 gatcatcatg agtatgcgtt tgcaacgtcg ctatctctcc ctgtggctcc gtcggctcgc
     5161 gacggatcgc atcgcaacga gtcaccacat gcgctgttcc gccttcgcgc cggatgagcc
     5221 gctagccgtc acccgccagg tcaagaacgc gttacgcatt gtggcgatga acgacgccgc
     5281 gcaagatctc ggcgtgcgaa ccggcatgcc gcttgccgac gcacgcgcca tgtatccggc
     5341 gcttgcggtc gtcgaaagcg acgaggcagc ggaccggcgt ctcatcgagg acgttgccga
     5401 ctggtgcgac cgctacacgc cgctggtcgg catccatgcg cccgacggcc tcgtgctcga
     5461 catcgccggc tgcgcccgcc tattcggcgg ggaagctgcc atatgccacg acatcctcgc
     5521 acgcctcgcc gaccagggcc tgcacgcccg cgccgctatc gccgatacgg tcggctgcgc
     5581 cttcgcggtc gcgcgtttcg gtggtgcgtc tcccttccca acagaggggg agggagaagg
     5641 tacgttccta gtgccgccag acgggatgcg gcgctccctc gcatcgctgc cgatggcggc
     5701 cctgcgactg gcgcccgcga tcgtcgaggc gctggccgag cttggcctca ggcgcatcgc
     5761 cgatgtcatc gatctgccgc gcgcgccgct cgccgcccgg ttcggcgaaa ttctggtccg
     5821 tcgtctcgat caggcgcttg ggcgggagga cgagccgatc acaccacgcc tgccggtgcc
     5881 gtcctatgtg gccgaacaga gctttcccga tccaatcggg cacgaacgcg acgtgctcgg
     5941 caccatcagg cggcttgcca ctcaacttgg tatcgccatg gagcagcgcc aagacggcac
     6001 ccagcttctt caggtcgcgc tgttccgcac cgacaacaag gtctaccgca tcgaggtcgg
     6061 cactggcgcg ccggtgcgcg atgcggccct catcgaacgc ctgtttgccg accggctggc
     6121 cgtgatcggg gatgcttgtg atcctggctt cggcttcgac atggtgcggc ttgccgcact
     6181 ggtggtggag cgtagcgagc cagtgcagag cggattctcg caaatgggag aattcggcga
     6241 gcttaccggc actgacgacg aggaattctc ccaccttatc gaccgcctcg atgcccgctt
     6301 cggaccacgc cgtgtcactc gcctggtgga gcaggacacc catatcccgg aattcgctgt
     6361 cgccgccggg ccagtcggca gacgacagag gacagacgac aaacagacga cagaggtcag
     6421 agggcggatg cacgggcttc ttcatccgtc ttccgtcatc tgtcctccat cacccgatac
     6481 cttggacagc ctctccccca ctcgcccggt gcgtctgttc agacgaccgg agccagtgga
     6541 ggcgatcgcg gaagttcccg acggaccgcc ggcgcaattt cgctggcggc gtgtgctgca
     6601 cgaggtcgcg gcggcggaag gtcccgaacg catcgccatg gagtggtggc acgatgcgga
     6661 cggccacaca cgcgattatt tccgcgttga aagccgcgaa ggtttacggg cttggctcta
     6721 tcgcgaaggc ctctatggct gcgccgcgcc ggcaccgcgc tggttcctgc atggattgtt
     6781 tggttgaaac ttgaagccac tgcatgaaag cttgcggtat gcccgcttat gccgaattgg
     6841 ccgtcaccac caacttctcg ttcttatacg gagcctccca cggggaggaa ctcgtggagc
     6901 gcgccaagga acttggcctc gcaggccttg gcatcgccga tcgcaattcg gtcgccggtg
     6961 tcgtgcgcgc tcatcaggcc gccaagaatg cgggtctgaa attcgcgccc ggcacgcgct
     7021 tcgtgtttgc cgacggcacg cccgacattc tcgcctatcc gcaggaccgc gccgcgtggg
     7081 ggcggctcac ccggctcctc accctcggca agcgccgcgc cgaaaagggg caatgcctgc
     7141 tcacctacga cgatctcata gcgcatatcg cggggctcaa tctcattgta ttaccggggc
     7201 gcttgcagca agctcgctcg gctccccgcg ttccatgctt cgaaacggcc gtggagcctg
     7261 tcatcggacc ggccaaaggc cggacccggt ggcggcctcc tcaggtcttc gacaaaatga
     7321 aacctcatcc tgaggagccg atcgaaggtc ggcgtctcga aggatggaac gcggcacgct
     7381 ctgtcacccc ccccaaaacc ttcgccaact cgcaactcgt ggccttcctc ctccacctcc
     7441 gcgaggccgc gccccatgct gtatggctcg gcgccagcat gctctatcgc ggcgatgatg
     7501 ctcgccgcct tgcccggttt gccgccatcg cgggcgaggc gcgcgtgccg ctgatcgcgg
     7561 tcggcgacgt gatctatcac ataccgaaac ggcgcgcctt gcaggatgtg gtgacttgca
     7621 ttcgcgaaca cctcaccctt gcgacggcgg gccgccgact cgaagccaat gccgagcgcc
     7681 acctcaagcc gccccacgaa atggtgcggc tgtttcgcga cgcgccggag accctcgcgc
     7741 aaacgctctg ctttctcgaa cgctgccagt tttcgctcga tcacctcaaa tacgaatatc
     7801 ccgacgaaac ccgcgaaggc ttcgccacgc ctcaggaagc actcgtcgct tacaccgatg
     7861 aaggcgcgcg ccagcgctat cccggtggca tcccggcgaa ggtaggcgtc gccctcgacc
     7921 acgagcttgc ccttatcgcc gaactcaaat acgcgcctta tttcctcacc gtccacgaca
     7981 tcatgcgcta tgcgcgttcg caagagattc tgtgccaggg ccgcggctcg gcggcaaact
     8041 ccgtgacctg cttctgcctc ggcatcaccg aggtcgatcc tgaacgcgtc gatctcctgt
     8101 tcgagcgctt cgtctcggca gagcgacgcg agccacccga catcgacgtc gacttcgagc
     8161 atgagcggcg cgagaaggtc atccaataca tttacgaacg ctatggccgc catcgcgccg
     8221 gcctcgccgc caccgtcatc acctaccgca cccgcagcgc cattcgcgag gttggcaagg
     8281 tttttggatt gtcggacgac accgtcgggg cgctcaccgg catgttgtgg ggctcctccg
     8341 gagaagcgat ctcggaacag caggcgcgtc gcgccggcct cgaccctacc gatccccatc
     8401 tcgccaaggt gctggcactg acgcgcgagc tgatcggttt tccgcgccat ctctcccagc
     8461 atgtgggcgg cttcgtcatc acccgcggcc ggctcgacga agtggtcccg atcgagaacg
     8521 ccgcgatgga ggagcgcact tgcgtcgagt gggataagga tgatctcgac gcaatcaata
     8581 ttctcaagat cgacgtgctc ggcctcggca tgctgagctg cctgcggcgg ggcttcgatc
     8641 ttttgaacaa gcattacgct ttactccctc ccccgccttc gggcagggca atcgcatatg
     8701 ggtcacctcc ccctggaggg ggga
//
LOCUS       DATILV010000346         3324 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1103151, whole genome shotgun sequence.
ACCESSION   DATILV010000346 DATILV010000000
VERSION     DATILV010000346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3324)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3324)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3324
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1103151"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..639)
                     /locus_tag="VLJ17_07845"
     CDS             complement(<1..639)
                     /locus_tag="VLJ17_07845"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSV22925.1"
                     /translation="MMFAEQSNGKDIGPPKTRPRSDHFDGKRFFNPTLPKDFAPLRWS
                     TLKKLRKPRSRWPACVENKGVPRLNEMLGVNEVATTFFNHATFLIQTGAITILTDPVW
                     SERASTFRRIGPKRVRKPGMAFEDVPKIDIVLLSHNHYDHMDVATLTQLRQRFAPTVL
                     AAAGDARTVGPLGFKNLRELDWWDEIQFNDTLKVTFVPAQDFSARSLFDRQRS"
     gene            complement(699..1703)
                     /locus_tag="VLJ17_07850"
     CDS             complement(699..1703)
                     /locus_tag="VLJ17_07850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017484995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HSV22926.1"
                     /translation="MQAPGTPSVDQLLVLLTVVEEGSFTAAAKRLRRATSAISYAIDT
                     LETQLGLALFDRGTTRKPKLTHVGEAIVSEAKAVAHSVDTLRARARGLLEGLESEVSL
                     VVDTMYPSDQLVAVLNDFHMKFPTVPLRLLVQALGGVERLIRNGDAGIGIGGLLHMDS
                     TGLQRIEIGGVTLIPVAASSHPLAQAGDNSAARALDHVQLVLSDRPAGEGRDHGVVSL
                     ATWRVGDLTLKHKLLLSGFGWGGMPEPMVRADIKSGSLVRLDLPDWRGGVYPMQVAHK
                     IETPPGPAGRWLIDRLVVLSAGAGAHTVPEAPKSSNVKRHRQASRRSVRSRTKKAKRE
                     "
     gene            1817..2419
                     /locus_tag="VLJ17_07855"
     CDS             1817..2419
                     /locus_tag="VLJ17_07855"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011581457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HSV22927.1"
                     /translation="MLKVGLIVGSTRPNRFADRPVQWLVEGASARRDLQLAVLDLRDH
                     RLPFFNEPASPAYTGGVYTEPEAEAWRKRIGEFDAFIATVAEYNHGPTAVLKNAFDSA
                     FLEWQRKPIAFVGYGGVGAARAIETLRGAVIELQMAPIRHEVNIAMEPYLGIVQNGRS
                     LNDYGYLVQSREAMFDHLVWWGEALKAARQKAAAASGIAA"
     gene            2469..3311
                     /locus_tag="VLJ17_07860"
     CDS             2469..3311
                     /locus_tag="VLJ17_07860"
                     /inference="COORDINATES: protein motif:HMM:NF014708.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HSV22928.1"
                     /translation="MTKSNALTSERPLHILHRTHGRRQGPITRLMSPSDLGQTLKPFV
                     FLDLFDTEGGSFSGVGWHPHSGIATVTYLWEGSVRYEDTTGAAGLLPAGGVEWFKAAG
                     GAWHGGGAGNSGRTRGFQLWLALAPDQELGQSESIYQKPQDVHADGPAAVLLGTLGKV
                     SSPLKAPSSINYLAVRLKAGEAWRYEPPADHTISWIALASGRLTVPEPAEAGELVAFE
                     TSHQAIDFRAEADTEFVLGSAARHPYELALGYYSVHTSPAKLQAGEHRIAEIKVRLQR
                     EGRL"
BASE COUNT          650 a         1027 c          987 g          660 t
ORIGIN      
        1 gcttctttgc cgatcaaaca ggctgcgtgc ggagaaatcc tgcgccggta cgaaggtcac
       61 cttgagcgta tcgttgaatt gaatctcgtc ccaccaatcg agctcacgca aattcttgaa
      121 accaaggggg ccgacagtcc gggcgtcgcc ggcggcagcg agaacggtcg gcgcaaagcg
      181 ttgccggagc tgtgtcagcg tcgcgacatc catatggtca tagtgattgt ggctgagcag
      241 gacgatatcg atcttcggca catcttcgaa cgccatgcca ggcttgcgca ctcgcttggg
      301 gccgatccgg cgaaaagtgc ttgcacgctc cgaccagacc ggatcagtca ggatggtgat
      361 ggcgccggtc tggatcagaa atgtcgcatg gttgaagaaa gtagtcgcaa cctcattcac
      421 ccctagcatt tcgttcagtc ggggcacgcc cttgttttcg acgcaagccg gccatcggct
      481 gcgcggtttg cgcaacttct tgagggtgct ccatcgcaaa ggcgcgaagt cttttggcaa
      541 ggtcggattg aagaagcgct tgccatcgaa gtgatcggat cgcggccgtg tcttcggcgg
      601 gccgatgtct tttccatttg attgttcagc gaacatcatc tctgacgata atttcctgct
      661 tcggcgagct gtccaacatc ctggagacgc tgcccgtcct attcacgctt cgccttcttg
      721 gttcgcgaac ggactgatct tctcgatgcc tgacgatgtc ttttgacatt gctcgatttt
      781 ggggcttcag ggacggtatg cgctccagcc ccagcagata acaccaccaa tcgatcaatc
      841 agccatcggc ccgcaggacc cggcggcgtt tcaatcttgt gtgcaacttg cattgggtaa
      901 acgccccccc gccagtcggg aaggtccaat cgcacgaggc ttccggattt gatatcggcg
      961 cgaaccattg gttccggcat tccgccccac ccgaaaccac tgagaagaag cttgtgcttc
     1021 aacgtcagat caccaacccg ccaggtggcc aggctgacaa cgccgtggtc tcgtccttcg
     1081 cccgcaggtc gatccgacag aacaagctgg acgtggtcga gggcacgcgc agcggaattg
     1141 tcgccagcct gcgcaagcgg atggctggag gcggcaaccg gaatgagcgt aaccccacct
     1201 atctcaatcc gctgcaggcc cgtgctgtcc atatgcagga gccctccaat gccaatcccc
     1261 gcatcgccgt tgcggatgag tcgttcaacg ccgccgagcg cttgcaccag gagccgcagc
     1321 ggcacggttg gaaacttcat gtgaaaatca ttgagcaccg ctaccaactg gtcgctcgga
     1381 tacatggtgt cgacgaccag cgagacctct gattcgagcc cctcgagaag gccccgcgca
     1441 cgcgcgcgca acgtgtcgac gctgtgagcg acagccttgg cttctgagac gatcgcctcc
     1501 ccgacatggg taagtttcgg ttttcgcgtg gtcccacgat caaacagggc aaggccaagc
     1561 tgcgtctcca gcgtatcgat cgcgtagctg atggcggagg tggcccgcct aagacgcttg
     1621 gcggctgcgg taaagctgcc ctcttcaacc acggtcagca gcaccagaag ctggtctacg
     1681 cttggcgttc cgggagcctg catttcgaat ttcctgaaaa gaaccttcaa ttttatccgg
     1741 attttcttag cacgaaaagc tcctaccttc ctatcgtcgg ttctcgtttg caaccgacgc
     1801 aaccgaggac aaaacaatgc tgaaggtggg attgattgtc ggcagcaccc ggcctaaccg
     1861 gttcgccgat agaccggtgc aatggctggt cgagggcgcg tcagcgcggc gtgacctgca
     1921 gctcgcggtg ctcgacctgc gtgaccatcg gctgccgttc ttcaatgagc cggcgtcgcc
     1981 tgcctacacg ggcggtgtct acaccgagcc cgaagcggaa gcctggcgca agcgcatcgg
     2041 cgagttcgac gccttcatcg caacggtcgc cgagtacaat cacggtccga cggcggtcct
     2101 caagaacgca ttcgacagcg cgtttcttga atggcaacgc aagcccatcg cctttgtcgg
     2161 ttacggcggc gtcggcgcgg cgcgcgcaat cgaaaccctg cgcggcgcag tcatcgaact
     2221 gcagatggcg ccgatccggc acgaagtgaa tatcgcgatg gagccatatc ttgggatcgt
     2281 ccaaaacggc cgctccctga acgattacgg ctatctggtg caaagccggg aggcaatgtt
     2341 cgaccacctg gtgtggtggg gcgaggcatt gaaagcggcc cggcaaaagg cggccgctgc
     2401 cagcggtatc gcggcctgat ccgtggaatg cgcgccttct tccgccacac atgaggagta
     2461 gtttcgtcat gaccaaatcc aatgcactta ccagtgagcg cccacttcac atcttgcatc
     2521 ggacgcacgg ccggcgtcag gggcccatca cccgcctgat gagcccgtct gacctcggcc
     2581 aaactctcaa accgttcgtc tttctcgatc tcttcgatac cgagggaggg tcgttttcag
     2641 gcgtcgggtg gcatccacat tcgggcatcg cgaccgtcac ttatctttgg gagggcagtg
     2701 tccgctacga agacacgacc ggcgccgccg gacttttgcc cgccggcggg gtcgaatggt
     2761 tcaaggccgc aggtggcgcc tggcatggcg gcggtgccgg caactccggc cggactcgcg
     2821 gattccaact ctggcttgcc ttggcgcccg accaagaact cgggcaaagc gaaagcatct
     2881 accaaaagcc gcaggacgtt cacgcggatg gacccgccgc cgtcttgcta ggcaccctcg
     2941 gcaaggtgtc gagcccgctc aaggcgccgt cctcgatcaa ctatctggcg gttcggctca
     3001 aggccggtga ggcttggcgt tacgagccgc cagccgacca cacgatttcc tggatcgcgc
     3061 ttgcctcggg aaggctcaca gttcctgaac ccgcggaggc gggcgagttg gtggccttcg
     3121 agacttcgca tcaggcgatc gacttccgcg cggaggcgga caccgagttc gtcctcggct
     3181 cggccgcacg ccatccatat gaactcgccc ttggatacta ctcggtgcac acgagtccgg
     3241 ctaagcttca agccggcgaa caccgcatcg ccgagatcaa ggtgcggctg caacgggaag
     3301 gccgtttgta gctgtgtgcg tcag
//
LOCUS       DATILV010000347         5018 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1361146, whole genome shotgun sequence.
ACCESSION   DATILV010000347 DATILV010000000
VERSION     DATILV010000347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5018
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1361146"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            299..682
                     /locus_tag="VLJ17_07865"
     CDS             299..682
                     /locus_tag="VLJ17_07865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSV22929.1"
                     /translation="MALPIKFDHCVVHVSDWERSNAFYRDVVGAEVVPRGQFFAYRFG
                     DTQLNLHGPGMSGMIVARLPVEPGNSDICFEWKGPIDDAIAHLARHRVAVELGPVKRN
                     GAKGEGTSVYFRDPDGSLLEFMSYQ"
     gene            692..1261
                     /locus_tag="VLJ17_07870"
     CDS             692..1261
                     /locus_tag="VLJ17_07870"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012318873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HSV22930.1"
                     /translation="MASTHDPNVLPADLPAPEDDGAARHLAGMRLPEVALQATDGTQV
                     DLAKLAGRTVVYIYPRTGRPGVASPEGWDAIPGARGCTPQSCSFRDHFAELRALGVAH
                     LFGISTQDTDYQREAIDRLHLPFAILSDASLQFACALSLPTFEVAGVTLLKRMVLVID
                     DGVIAKVFYPVFPPDESAAAVAGWLRASR"
     gene            complement(1195..1917)
                     /locus_tag="VLJ17_07875"
     CDS             complement(1195..1917)
                     /locus_tag="VLJ17_07875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HSV22931.1"
                     /translation="MSVDGPAACASGLIDTKVGRDCPRCPRLVAFRQSWRGKQPDWHN
                     APVASFGPVGARLLIVGLAPGLQGANRTGRPFTGDYAGDLLYATLTRYGFAAGEYAAR
                     LDDGLRLIDARITNAVRCVPPENKPVGEEIKQCRVFLKATIAEMPELAAIVLLGRIAH
                     DSTVAALGRSLAAVPFGHGAQHVLDRLTLFDSYHCSRYNTNTGVLTPDMFRKVFAAVR
                     RYLDARSQPATAAALSSGGKTG"
     gene            complement(1930..2589)
                     /locus_tag="VLJ17_07880"
     CDS             complement(1930..2589)
                     /locus_tag="VLJ17_07880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HSV22932.1"
                     /translation="MTVPGEKIALFIDGANLYATAKSLGFDIDYKRLLREFQSRGYLL
                     RAFYYTAVVEDQEYSSIRPLIDWLDYNGYTVVTKATKEFVDQTGRRKVKGNMDIELAV
                     NAMEIAGHIDHMVLFSGDGDFRSLVEAVQRRGVRVTVASTVSTQPPMVADELRRQADI
                     FLDIAELQAKIGRDPGERMDRPPREPREPRQHTPQFLQRGPTPQRAPVGAVDDDEFDE
                     D"
     gene            2928..3335
                     /gene="rpoZ"
                     /locus_tag="VLJ17_07885"
     CDS             2928..3335
                     /gene="rpoZ"
                     /locus_tag="VLJ17_07885"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HSV22933.1"
                     /translation="MARVTVEDCIDKVENRFELVLLASHRARMVSSGSQITIDRDNDK
                     NPVVALREIAEQTISPGDLKEDLIHSLQKYVEVDEPEPEAVPLIAGAGGSVEADDLEI
                     TADRMTEEELLKGLEGLAPPEVRPEPVEPEDEE"
     gene            4050..>5018
                     /locus_tag="VLJ17_07890"
     CDS             4050..>5018
                     /locus_tag="VLJ17_07890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HSV22934.1"
                     /translation="MEQSTDLPNMETPAKARRAPPRAPGIDLPNDAAPKRTKPLMRQY
                     DLVERVRKYNPNTDEDLLNRAYVYAMKAHGEQKRLSGDPYISHPLEVAAILTEHKLDD
                     ATIAAALLHDTIEDTEATRAEIDQLFGRDIGHLVEGLTKLKKLDLVSREAKQAENLRK
                     LLLAIAEDVRVLLVKLADRLHNMRTIQHMTPDARRRIAEETIDIYAPLAGRIGMYELR
                     EELETLSFHELNPEAHKVIGERLETLAKRHLGLISEIEAQLTRKLANRGIAATVTGRR
                     KRPYSIWRKMERKAVGFEQLSDIFGFRVIVEGVPECYHALGVVHTTW"
BASE COUNT          990 a         1547 c         1528 g          953 t
ORIGIN      
        1 cgctaaaatt cttggtcagg gcgatcgcac agctccggtc gtcctgcgcg cccgtccccg
       61 cgccatcttg agcactgacg tgacaccccg ccttccggcc ataaacgtac cctgtatctt
      121 caagcaagca gagaccgtat cgttccacgg aaggcgggac gcgcgatctg ccgatcgctt
      181 ccgggtattc ggctggtcga gttgggcgcc ccgcatttcc ttgtgcaggc cgtacccgcc
      241 gccgcggccc gtgaggtcga cgcatttctg cggcggatcg tctttgagga gtcccgcgat
      301 ggcgctgccc attaaattcg accactgcgt tgttcacgtt tccgattggg agcgctccaa
      361 tgccttctat cgcgacgtcg ttggcgccga ggtggtgccg cgtgggcaat tttttgcgta
      421 tcggtttggc gacacccagc tcaatctcca tgggccgggc atgagcggca tgatcgtggc
      481 gcgcctgcca gtggagcccg gcaacagcga catctgcttc gagtggaagg gccctatcga
      541 cgatgccatc gcgcatctgg cgcgccaccg ggtggcggtc gagctcgggc cagtgaaacg
      601 caatggcgcc aagggcgagg gcaccagcgt gtatttccgc gatcccgacg gttcactctt
      661 ggaattcatg tcgtatcagt gagggtaacg gatggcctcg acccatgacc cgaacgttct
      721 tccggccgac cttccggctc ccgaggacga tggcgcggcg cgccatctgg ccgggatgcg
      781 gctccccgag gtcgccctgc aggcaaccga cggcacgcag gtcgatcttg caaagctcgc
      841 cggccgcact gtcgtctaca tctatccgcg caccggtcgt ccgggtgttg cgtcccctga
      901 gggctgggac gcgattccag gtgcgcgcgg ctgcacgccg caatcctgtt cgttccgcga
      961 ccacttcgcc gaattgaggg cgctgggcgt cgcccacctg ttcggcatct cgacccagga
     1021 taccgactat cagcgcgagg cgatcgatcg cctgcatctg ccgttcgcaa ttctatccga
     1081 tgccagcctg cagttcgcgt gtgcactgag cctgccgacc ttcgaggtcg ccggcgtaac
     1141 gctgctcaaa cggatggtgt tggtcatcga tgatggtgtc atcgcgaagg tgttctaccc
     1201 ggtttttccg cccgacgaga gcgccgccgc ggtcgccggc tggctgcggg catcgaggta
     1261 acggcgcacg gcagcaaaga ccttgcggaa catatccggc gtgagcactc cggtgttcgt
     1321 gttgtaacgc gagcagtgat agctgtcgaa caatgtgagt cgatcgagca catgctgcgc
     1381 gccgtggccg aacggtactg ccgcgagaga gcggccgagc gccgccacgg tgctgtcatg
     1441 ggcaatgcga ccgagcagta caatcgccgc gagctccggc atttcggcga tcgtcgcttt
     1501 gaggaaaacg cggcactgct tgatttcctc gccgaccggc ttgttttccg gtggcacgca
     1561 gcgcaccgca ttggtgatgc gcgcatcgat aaggcgcagg ccgtcgtcca gtcgggccgc
     1621 atattcgccg gccgcgaagc cgtaacgcgt gagcgtggca tagagcaaat cgcccgcata
     1681 gtcgccggtg aacgggcgac cggtgcggtt tgccccctgt aggccaggcg ccaacccgac
     1741 gatcagcagg cgcgctccca ccggcccgaa cgacgcaact ggggcattat gccaatccgg
     1801 ttgcttgccc cgccaggatt ggcgaaaggc aacgagacgc gggcaacgcg gacaatcccg
     1861 gccgactttg gtgtcgatca gaccggatgc acaggcggct gggccgtcga cggacatgag
     1921 gatcggattt tagtcctcgt cgaattcgtc gtcgtcgaca gcgccgaccg gtgcgcgctg
     1981 cggagttggc ccgcgttgca ggaattgcgg agtgtgctgg cgcggttccc tcggctcgcg
     2041 tggcgggcga tccatacgct cgcccgggtc gcggccgatt ttcgcctgca actcagcgat
     2101 gtcgaggaaa atgtcggcct gccgccgcag ctcgtccgca accatgggtg gctgggtcga
     2161 aaccgtcgag gcgaccgtga cccgtacgcc cctgcgttgt accgcctcga ccagcgagcg
     2221 aaagtcgccg tcgccggaga acagcaccat atgatcgatg tgcccggcga tctccatggc
     2281 attgacggca agctcaatgt ccatgttgcc cttcaccttg cggcggccgg tctgatcaac
     2341 gaattccttg gtggctttgg tgacgactgt gtagccgttg tagtcgagcc agtcgatcaa
     2401 tgggcgaatc gaggaatact cctgatcttc caccacggcg gtataataga atgcgcgcag
     2461 cagatatccg cgcgattgaa attcacggag cagacgtttg taatcgatgt cgaaccccaa
     2521 cgactttgcg gtcgcgtaaa gatttgcgcc atcgatgaac aacgctattt tttcaccggg
     2581 taccgtcatt taagtagtct cttcccgtat gcgccagcgc cgcgactggt caaatcgccg
     2641 acatggcgcg ccgatgctac tggcaacgga attcaagttt cgaaaacggg cgcaacgcac
     2701 agtcgcttgc cagaaggccc cgtcgcgaaa aaatgtcgcg cccaccccac caccgatggt
     2761 cagctaacag agctttgcgg cttagccaag cccaatgtaa ggcagctgtc atcggaataa
     2821 caactaattt taatcttgca ctgcgattag gtaatctata attgagcatg caaactgcaa
     2881 taattgttgc ctgacatggc gtcaacacat tttggagttt cggactcatg gcacgcgtta
     2941 ccgttgagga ctgcatcgac aaggtcgaaa atcgcttcga actcgtcctg ctggccagcc
     3001 accgagcccg gatggtctcc tccggctcgc aaataacgat tgaccgcgac aatgacaaga
     3061 atcctgttgt cgcattgcgc gaaatcgccg agcagacaat ttcgcccggc gatctcaagg
     3121 aagacctcat tcactcgctg cagaagtatg ttgaggtcga tgagccggaa cccgaagcgg
     3181 tgccgctgat cgccggcgcc ggcggcagtg tcgaggcgga cgatctggag atcacagctg
     3241 accgcatgac cgaagaggag ctgctcaagg gccttgaggg cttggcacct ccggaggtgc
     3301 gcccagaacc tgtggagccg gaagacgagg aataggttgt tttttgcacg tgttgggatg
     3361 ggttgaaccg aaaccccatc aacggcgggg ctatatcaag gggctgtcga ttgggtttcg
     3421 ctgtcgctca acccctcccc gaaggcccta accctcgggg ctcggaaacc cgtgggtggt
     3481 tgagcggcat cccgtcatag acatcagcga cctgcacgat atcggcgacc agacaggtgc
     3541 gatcaacaag cgccgtcgag gcatccatca ccagaaacat cggcctcccg agcggcgcga
     3601 gcgcggcgtc tcgaagctcg cggccgaagc agcaaaacgc gctgagtcgt gcttggcacg
     3661 gcgtcgtttg gcagatggtc gggcgatcca ttgatgcgaa tcagtagatg gtaccatcat
     3721 gatggggacg cctttaacca gttcgcaacg ttgcgggcct cctggaaagc ccgaattgcc
     3781 gcccatcatc tgttaaggtg cgggcggttt cagccgagac cgcgcgcgcg gggtcaaatt
     3841 tgcacccgct ggcagagtca cacggtacca gcgtgccttt tgaaacgtcg acggggcggc
     3901 cagaacgacc ccgccattga ctgctcttga tgccgcccga tccgaggctt gcgcatattc
     3961 cgggttgcaa actgttgctg aacaataaat tcgtcatgat attctaagct gcaggtgcgg
     4021 caccgcctgt cgcatggcga ggagccccga tggagcagtc taccgatctg ccgaacatgg
     4081 aaactccggc aaaggcccga agggcaccgc cgcgagctcc cggcatcgac ctgccaaacg
     4141 atgcggcacc gaaacgcacg aagccgctga tgcggcaata cgacctggtc gagcgggtac
     4201 gcaagtacaa tcccaacact gacgaggacc tcctcaaccg cgcctatgtc tatgcgatga
     4261 aggcccatgg cgagcagaag cggctttcag gagaccccta catctcccat ccgctcgagg
     4321 tcgccgcgat cctcacagaa cacaagcttg acgacgctac catcgcggcc gcgctgttgc
     4381 acgataccat cgaggatacc gaagccacgc gcgccgagat cgatcagctg ttcggccgcg
     4441 atataggcca cttggtggag gggcttacca agctgaaaaa gctcgatctc gtgtcccgcg
     4501 aggccaagca ggccgagaac ctgcgcaagc tgttgctggc gatcgccgag gatgtgcgcg
     4561 tgctgttggt caagcttgct gaccggctgc acaacatgcg caccatccag catatgacgc
     4621 ccgacgcgcg tcgccggatc gccgaggaaa ccatcgacat ctacgcgccg ctcgcgggcc
     4681 gcatcggcat gtacgagttg cgcgaagagc ttgaaacctt gtcgttccac gaactcaacc
     4741 cggaagccca caaggtgatc ggtgagcgcc tggaaacgct ggcaaaacgg catctcgggc
     4801 tgatctcaga gatcgaggcg caactcaccc gaaagctcgc caatcgcggc atcgccgcca
     4861 ctgtcactgg ccgccgcaag cgtccctact cgatttggcg caagatggag cgcaaggcag
     4921 tcggatttga gcaattgtcc gacattttcg gcttccgtgt catcgtggag ggcgtgccgg
     4981 aatgctatca cgcgctcggc gtcgtccaca ccacttgg
//
LOCUS       DATILV010000348         4303 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2638739, whole genome shotgun sequence.
ACCESSION   DATILV010000348 DATILV010000000
VERSION     DATILV010000348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4303)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4303)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4303
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2638739"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            108..593
                     /locus_tag="VLJ17_07895"
     CDS             108..593
                     /locus_tag="VLJ17_07895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22935.1"
                     /translation="MLQSTAAPPTPTPAVASPAEATAMMIEIGKLMNELCDVVETETD
                     LVRAGRVAAAAAAAERKGELARAFMHNATQVRAGGGHFGRIAPPLLDALRRQHEQLCA
                     KLRVNLTVLATARAVSEGILRGVSNELAKRSTVQTYGESGRRHVQAVRSATPIAVNRS
                     L"
     gene            788..1165
                     /locus_tag="VLJ17_07900"
     CDS             788..1165
                     /locus_tag="VLJ17_07900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22936.1"
                     /translation="MDAGIAVKPVAGIAPTEHVRPATVASQGAAPTDLPEAKAVNPPP
                     EVTPTHIETPAVNSSAVDIAHNFVVDPQTREVVYRVMDLRTRQVLLQVPDAAALLRRA
                     AYARALADNPKNAPAKNLTDIQG"
     gene            1211..1732
                     /locus_tag="VLJ17_07905"
     CDS             1211..1732
                     /locus_tag="VLJ17_07905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22937.1"
                     /translation="MSMTISAFAQMQNWRANQADLNRQIYGNTNADPTADFATAFANA
                     QNNFFSQKNGLAVTAMQTRLVQKAQAQAAAKAADSTTGSDKAQKAQTDGKTGSGNTPT
                     TNTTSAALTTARAAGNDILTNLGLRPVPPQKTTPSSASGPYVPPTNPATGHAYVQTSA
                     ATVGTLGAINLFV"
     gene            2331..3767
                     /locus_tag="VLJ17_07910"
     CDS             2331..3767
                     /locus_tag="VLJ17_07910"
                     /inference="COORDINATES: protein motif:HMM:NF012874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HSV22938.1"
                     /translation="MAGTVTLTAGVRANLLSLQQTATLVGQTQGRLATGKKVNSALDN
                     PTNFFTASALTARGSELSALLDQMTNGINTLQAADNGLTSITNIIQSMQATVTQARQD
                     SSWQSQTFSFNGTAIAALNTSPFAQLSFSGGAVGTVPVAVKLNDNEDLTGGAFAAGAG
                     TFTIQAADINGGTAVTVNVGATDTEAQVIKAINGAVGIPGFAVDNAGAIDLVDTAGNQ
                     ITVNTGGTAVAGFNAGSSTSTQSTTNFNVNTTDGIVSAINNNAQLSGLVKAVNDGGKL
                     QIINLSTSALTVTGVSGTSIDGSANTATIGGNTVRANLVTTFNQLRDQLDKTAFDSSF
                     NGNNLLAGDQLKLVFNENSTSTLTIQSTASTGINNTQLGIGSASIGQFQDNSLLDNLS
                     NTLHNALNTVASQASSFGSNLSIVQNRQDFTKALINTLQTGADSLTLADINLEGANML
                     ALQTRQQLSTTALSLANQANQAVLRLFG"
     gene            complement(3756..>4303)
                     /locus_tag="VLJ17_07915"
     CDS             complement(3756..>4303)
                     /locus_tag="VLJ17_07915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22939.1"
                     /translation="AGSRIERIVVAFEAGRDGFWLARWLRARAIEAYVIHPTSIPVSR
                     EHRRAKTDRLDAGLLMRSVLGWLRGEAKHCSMAAIPTIAEEDARRPKRQAMESDQEQT
                     RSKRKQLLRARSTSSARVMVSRRPFSPCAIPLPRKRGEVKTAANFDCLAHSAGGSTQN
                     KKRRGRSPAVLDVLGSAGLAE"
BASE COUNT          933 a         1449 c         1172 g          749 t
ORIGIN      
        1 caatgccggc ggcctcggcc tcgccaatca aatctacaag tccatgctgg cgcggcaggc
       61 gaacaggaca ccctgaagat gcagatgatc tgaccggaga gcaccccatg cttcaatcta
      121 ctgcggcccc gccaactcca acgcctgcgg ttgcgagccc tgccgaggcg actgcgatga
      181 tgatcgaaat cggcaagctg atgaacgagc tgtgcgacgt cgtcgagacg gaaaccgacc
      241 tggtgcgcgc tggccgtgtc gcggcggccg ccgcggcggc cgaacgcaaa ggcgaactcg
      301 cccgtgcctt catgcacaat gctacgcagg tacgcgccgg tggcggccat ttcggacgca
      361 tagcaccacc actgctcgac gctttgcgcc ggcagcacga gcagttatgc gccaagctgc
      421 gggtcaatct gactgtgctg gcgaccgccc gggccgtgtc ggaaggcatc ctgcggggtg
      481 tgtcaaatga gcttgcgaaa cgctcgacgg tgcaaaccta tggggagagc ggacggcgcc
      541 acgtccaggc cgtgcgctca gcgacaccca tcgcggtgaa ccgcagcctg tagactggcc
      601 aggatcgaac gcggcggcga ccggcgcaat cgccccaact cgtactcgca aattttcccg
      661 acatttttcg ccattgaggt gagcgcaatt taaccgtgtt ctcttacgtc agcttaacat
      721 cctcagcgca tactccagcc gaagcctgga ttcggatgat ccgggcgagc gcggccagga
      781 ggctgatatg gacgcgggaa ttgctgtaaa gccggttgcc ggcatcgccc ccacggaaca
      841 cgtgcggcca gcgactgtcg ccagccaggg cgccgcgccg accgatttgc ccgaggccaa
      901 ggccgtcaat ccgccgcccg aggtcacacc gacgcacatt gaaacgccgg cggtcaattc
      961 cagcgcggtc gacatcgccc ataattttgt cgtcgacccg cagacccggg aagtcgttta
     1021 tcgggtcatg gatctacgca cccggcaggt gctcttgcaa gtgcctgacg ccgcggcact
     1081 gctgcgcaga gctgcctacg cgcgagcgct ggccgacaac ccgaaaaatg cccctgccaa
     1141 gaatctgact gacatccagg gataggtcac ggcgtattaa ctcaatggta ggcattgccc
     1201 cacaaagtcc atgtccatga ccatttcagc tttcgcccaa atgcagaatt ggcgcgccaa
     1261 ccaggcggac ctcaacaggc aaatatacgg caatactaat gccgatccga ccgcggactt
     1321 cgccaccgca ttcgccaacg cacagaacaa ttttttcagt caaaagaacg gcctcgcggt
     1381 cactgccatg cagacgcgat tggtgcaaaa ggcgcaggcg caagcggcag cgaaggctgc
     1441 tgacagcaca accgggtccg ataaggcgca aaaggcgcaa actgacggca aaaccggatc
     1501 cggtaacacg ccgacgacga acacaaccag cgccgcgctt accaccgcac gtgcggccgg
     1561 caacgacatc ctcaccaatc tcgggctgag gcccgtcccg ccacaaaaaa cgacgccatc
     1621 ctccgcgtcc ggtccttatg tccccccgac caatccggcg accggccacg cctatgtgca
     1681 gacttcggct gccaccgtgg gcacccttgg tgccatcaac ctcttcgttt gaaattcggc
     1741 gcgacgctgc gtgaacagac ctcgcccgtc ctgacagtcc cgatctccac ataggccccg
     1801 tcgggctcct gaccgcttgt cattcgattc tacgtgactt tcgggaacgg atagcccgcc
     1861 ctctttacct ctccgctatt gggcagcggt cggattccga gcgcagcgag gaattctgtg
     1921 tgagggattc gcgcactccc ccggcgtccg aaaagcgctc ccaccccgac cccaccgcgc
     1981 aagcgaagga ggaaaagggt gaggcccccc gcgggagagg taaagccaac aaatttcatc
     2041 tgactgactg agcctcaggg ggtgctcggc gccttcgcgc atcggcgcgg tcgtcatcgc
     2101 acaacggcca cagccgttag catccgttta atattcatgg ttagcaaaca gtaaatcgtg
     2161 cttaatctat actctaaaag tgtgatttta tactttctat acttcatgaa gtcttctatt
     2221 aaccacgttt ttttacgcgc cattattgcg aagcatgcga aaactatgag gtcgacacat
     2281 gagatcgacc aacagccgcc gtggcggcgt caaccagaaa ggttcacatc atggctggta
     2341 ccgtaaccct gacagctggc gtgcgcgcca atttgctgtc cttgcaacaa accgcgacac
     2401 tggtgggcca aacccagggc cgcttggcga ccggcaaaaa ggtcaacagc gcgctcgaca
     2461 acccgaccaa ctttttcacc gcatcggcgc taacggcgcg cggcagcgaa ttgtcggcac
     2521 tgctcgatca gatgacgaac ggcatcaaca ccctccaggc agccgacaac ggcctgacgt
     2581 cgatcacaaa catcatccag tcaatgcagg cgaccgtcac ccaggcgcgc caggattcgt
     2641 cgtggcaaag ccagactttc tccttcaacg gcaccgcgat cgccgcgttg aacacctccc
     2701 cgtttgcgca actgtcattc tctggcggcg ccgtcggcac cgtcccggtc gcggtcaaac
     2761 tcaatgacaa cgaggactta accggcggag cctttgctgc cggcgcgggc acctttacga
     2821 tccaagcagc cgacatcaac ggcggcaccg ccgtcactgt aaacgtgggc gccaccgaca
     2881 cggaagccca agtcatcaaa gcaatcaacg gcgccgtcgg catcccgggt tttgccgtcg
     2941 ataacgctgg tgcgatcgat ctggtggata ccgccggcaa tcagataacc gtcaacaccg
     3001 gcggcaccgc cgtcgccggc tttaacgccg gctcttccac ctcgacgcaa tcgacaacca
     3061 atttcaacgt aaacacgacc gacggcatcg tctccgccat caacaacaac gcccagctct
     3121 ccggcctggt gaaggcggtc aacgacggcg gcaagctcca gatcatcaac ctgtcgacca
     3181 gcgcgctcac ggtgaccggc gtctccggca cgtcaatcga cggatcggcc aacaccgcga
     3241 ccattggcgg caacaccgtc cgcgccaacc tggtcaccac cttcaaccag cttcgcgacc
     3301 agctcgacaa gaccgccttc gactcgtcct tcaacggcaa caacctactt gccggcgatc
     3361 agttgaaact ggtgttcaac gaaaacagca cgagcacgct gacgatccag tcgaccgcct
     3421 cgaccggcat caacaacacc cagttgggca tcggcagcgc ctcgatcggg cagttccagg
     3481 ataacagcct gctcgataat ctttcgaaca ccctgcacaa cgccctgaat acggtcgcaa
     3541 gtcaggcctc gtccttcggc tccaacctgt cgatcgtgca gaatcgccag gacttcacca
     3601 aggcgctgat caacaccctg caaaccggcg ccgactccct cacgctcgcc gacatcaatc
     3661 tggaaggcgc gaacatgttg gcgttgcaga cccgtcagca gctctcgacc acggcgctgt
     3721 cgctggccaa ccaggcgaac caagcggtac tgcggctatt cggctaagcc ggccgatcct
     3781 agaacatcga gaacggcggg gcttcggccc cgccgttttt tgttctgtgt gctccctccc
     3841 gcgctgtggg cgaggcaatc gaaattggct gcagtcttca cctctccccg cttgcggggc
     3901 aggggtatcg cacatggaga aaaaggcctg cgagatacca tgacgcgagc agaagatgtc
     3961 gaacgcgccc gcaatagctg tttgcgcttc gatctcgtct gttcctgatc tgattccatg
     4021 gcttggcgtt tcggacgccg tgcgtcttct tccgcaatgg tcgggatcgc cgccatgctg
     4081 cagtgcttgg cctcgccacg cagccaaccg agaaccgacc gcatcagcaa tccggcatcc
     4141 agccggtccg tcttcgctcg ccgatgctcg cgggacaccg ggatactggt cgggtggatc
     4201 acataggcct cgattgcccg cgcccgcaac cagcgcgcaa gccagaagcc gtcgcggcca
     4261 gcctcgaaag ccacaacaat gcgttcgatt ctgctgcccg cct
//
LOCUS       DATILV010000349         4367 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_851510, whole genome shotgun sequence.
ACCESSION   DATILV010000349 DATILV010000000
VERSION     DATILV010000349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4367)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4367)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4367
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_851510"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(298..960)
                     /locus_tag="VLJ17_07920"
     CDS             complement(298..960)
                     /locus_tag="VLJ17_07920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22940.1"
                     /translation="MFYLAGAAACVLDILGSLQGGTGTQQNGTVSATTSSQSPFNIPA
                     YPTDSGTTVGATATSPNPAGNSGGCWSCAETMSTLLSEQSQSTSATADTVANRLGTIE
                     QLLNRIGAGNGIGGFDGSLDSTQNTDGPHKHSFGGVEQLLQSLESPFGAGASTSPDAL
                     TAPDAGFSSSFPFSWPSGGAPGAVASGLGDLGVNPLGRLINLQSRMLAAATAGRNLST
                     TA"
     gene            complement(1228..2079)
                     /locus_tag="VLJ17_07925"
     CDS             complement(1228..2079)
                     /locus_tag="VLJ17_07925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22941.1"
                     /translation="MDESKKILWPTMLFKKSAFIFGASLAFACYSASPARAADAEAVT
                     IDTTFTVKTPPVRLDKPAHRARASVVLMTGGDGLLSLDATGTIITSTGNFLIRSADLF
                     LHRGLNVMMADAAPAHPGGLNAGTRLSATHAAELQGFINAALNRWGKPVWVVGTSNGS
                     ISTVTAGGFQPALAGLTGVVMTSPVTNLSLTNQATFNLYASRITLPALVVWHQDDHCT
                     VSPPAGSAALFAIIPSVGKASRTFDHGHSVATDPCGAFSEHGYAGIEKEVVEEIAEFV
                     RRRGEVD"
     gene            2406..3089
                     /gene="rpe"
                     /locus_tag="VLJ17_07930"
     CDS             2406..3089
                     /gene="rpe"
                     /locus_tag="VLJ17_07930"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HSV22942.1"
                     /translation="MYRALAVAPSILAADFAMLGEEVRAIDAAGADWIHVDVMDGHFV
                     PNITIGPDVVKALRPHSDKPFDVHLMIAPCDPYLEAFAKAGADLITVHVEAGPHVHRS
                     LQAVRALGKKAGVTLNPGTPIDTIEPVIDLVDLILVMSVNPGFGGQSFIPTAIEKVAR
                     LRAMAGARPIDIEVDGGVTPETAPAIVRAGANVLVAGSAVFKGGASSYRANIAAIRHA
                     AALARGEAA"
     gene            complement(3101..3943)
                     /locus_tag="VLJ17_07935"
     CDS             complement(3101..3943)
                     /locus_tag="VLJ17_07935"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSV22943.1"
                     /translation="MHGKVVVITGATSGIGQIAATRLAALGARIILVARNPQRAETTL
                     AKLREVGPELAHRAHFADLSVLADMKRVGQEIATAEPRIDVLINNAGNVFSRRELTPD
                     GLERTFATNHMAYFVLTGCLRECLQAAAPSRIVNTASAAHIGRTLDFDDLQLATHYTV
                     MTAYGRSKLANILFTRELARRLAGTGVTANCLHPGFVTTGLGQRDGGIFGMMVRFTML
                     FAGRAEYGAQTIVHLASSPDVASVSGAYFISSRQTEPATAARDDVAAKRLWAESERIA
                     GLVS"
     gene            complement(3990..4178)
                     /locus_tag="VLJ17_07940"
     CDS             complement(3990..4178)
                     /locus_tag="VLJ17_07940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22944.1"
                     /translation="MTKAIANATTVAIINGQAAYEASSSDLSSIPASIPTTNIIPFTI
                     DVPIWLGLPALKPTKLSV"
BASE COUNT          836 a         1316 c         1365 g          850 t
ORIGIN      
        1 tgcgggccat gggatatcct ttgttgggcc aatcgcgcga gtttcgattt ttgaggtcgg
       61 tgtgcggctc gatcctccaa ggccgcctgc atcgaattcg gcccgtatga tcctaggcaa
      121 gtcaaagctg gtcggcgctg acgttagtgc gtgcttttcg gtgtgaggtt cacgatattt
      181 tcaaccttcg cggccccctg ggggagcgag catggagtat gggggcctga aatacggcag
      241 ctcgcaagtg gccgacgaca cgcgggcgat aagtccgcgg cgaaccggcg cacgccgtca
      301 cgccgtcgtt gacagattcc gaccggcggt cgcggcagcg agcattcggg attgcagatt
      361 aatcagtcgc cccaagggat tgacaccgag gtcgcccaat cccgacgcga cggctccagg
      421 agccccacct gaaggccatg agaaaggaaa cgaagatgag aagccggcgt ccggcgccgt
      481 caaggcgtca gggcttgtgc tcgcaccggc gccaaacgga ctctcgaggg actgcagcaa
      541 ttgctcgacc ccgccgaaac tgtgcttgtg ggggccgtcc gtgttctgcg tcgaatccaa
      601 cgacccatcg aagccgccta ttccgttgcc cgcgccaatt cgatttagca actgttctat
      661 agtgccaagc ctattggcca ctgtatcagc cgtcgcgctg gtggattggc tttgctccga
      721 caacagcgtg ctcatggttt cagcgcacga ccagcagccg ccgctgttgc cggccggatt
      781 gggacttgtc gcagttgcgc caacggtcgt accgctatcc gttgggtatg cgggaatgtt
      841 gaatggactt tggctcgagg tcgtcgcact tacggtgcca ttttgctggg tgcctgtccc
      901 gccctgcaac gaacccagaa tatcgagcac gcacgctgcg gctccggcca aatagaacat
      961 cgcttcgctc ctgcatcgac ccggtccatt gacgggccgc gcgccaatta tcaaaccggc
     1021 cgtatgtcga cctgagctga tgccagcaag agccatgccg ccccacggcg cgaaaattct
     1081 tttgaatttc aacgggattg caagcccccg ctcccggcaa catatgccgg gcggcagacg
     1141 caggcgggca taatctgccg cacccgcaat ccgagtatct atcagatcag aaaccgaatc
     1201 tgagggccgt gtgacgcccg ggcccgatca atccacctct cctctgcggc ggacaaactc
     1261 ggcgatctct tcgaccacct ctttttcgat gccggcatag ccatgctcgg aaaaagctcc
     1321 gcacggatcg gtggccaccg aatgaccgtg gtcaaacgta cggctggctt tgcccactga
     1381 cgggatgatt gcgaacaatg ccgccgagcc ggcaggtgga ctgaccgtgc agtgatcatc
     1441 ctggtgccag acgaccaggg ccggaagcgt gatgcgcgat gcatagaggt tgaaagtcgc
     1501 ctgattggtt aaggacaagt tcgtcaccgg cgaagtcatg accacccccg tgagccccgc
     1561 cagggccggc tggaagccgc ccgccgtcac cgtcgagatg ctgccattgc ttgtgccgac
     1621 cacccagacg ggtttgcccc agcggttgag agcggcgttg atgaagccct gcaattctgc
     1681 agcatgcgtc gcgctcaagc gggttccggc gttgaggccg ccagggtgcg ccggcgcggc
     1741 atccgccatc atgacgttaa ggccacggtg caggaacagg tcggcggacc gaatcaggaa
     1801 gttgccggtc gaagttatga tggtgccagt cgcatcgaga ctcagcagac catcgccacc
     1861 ggtcatcagg acaacactgg cgcgggctct atgcgccggc ttatcgagac gcacaggcgg
     1921 cgtcttgacg gtgaatgtcg tgtctatggt cacggcctcg gcgtcggcgg cacgggcagg
     1981 tgaggcgctg tagcaggcaa atgccagtga cgcgccaaag atgaatgcag atttcttgaa
     2041 cagcatagtt ggccataaga tcttttttga ttcgtccatt gggacaccct cattgattga
     2101 taggatatga aaattctggc taaacgcggt agtcctatac attgcgctca tcgcaaaatt
     2161 caaggggatg atcacaagtc gaaagtttaa gaattagaga tacgtcaccg cgcaaatgtc
     2221 gagttcctcg aatggttgcg gggaaatcgc cttggaatgg aacgcagctg cgccgcggat
     2281 cattgccgct caccgtacgt tgtgttaggc gcccttaggt catcgacctt cgatcgacat
     2341 aagttctatg gcatagtttc acggcgccct cagccaatcc ggtcgacgcc tttgcggaga
     2401 taccgatgta tcgtgcgctc gccgttgccc catccatcct ggccgcggat ttcgccatgc
     2461 tcggcgagga ggtgcgcgcg atcgacgcgg ccggggccga ttggatccat gtggacgtca
     2521 tggatgggca cttcgtgcct aacatcacca tcgggcctga cgtggtgaag gcgctgcggc
     2581 cgcacagcga caagccgttc gacgtacatc tcatgatcgc gccgtgcgat ccttatctcg
     2641 aagcttttgc caaggcgggc gccgatctca tcaccgtgca cgtggaagcc ggtccccatg
     2701 tgcaccgctc gttgcaggca gttcgggcgc taggcaagaa ggcgggcgtt accctcaatc
     2761 ccggtacgcc catcgacacc atcgagccgg tgatcgacct cgtcgatctc atcctggtca
     2821 tgtcggtcaa tcccggcttc ggcggccaga gcttcatccc gacggcgatc gaaaaggtgg
     2881 cccggctgcg tgccatggca ggcgcacgac cgatcgacat cgaggtcgat ggcggggtga
     2941 cgccagagac cgcgcctgcg atcgtgcggg cgggcgccaa tgtgttggtc gccggctccg
     3001 ccgtcttcaa gggaggcgcg agcagctacc gggcgaatat tgcggcaata cgccacgcgg
     3061 cggcactggc gcggggcgag gcggcgtaga gctccttgcg tcagctcacc agccccgcaa
     3121 tcctttcgct ctctgcccat aaccgcttcg ccgccacatc gtcccgggca gcggtggccg
     3181 gttcggtttg ccggctggat atgaaatatg cgccgctgac ggaggccacg tcgggcgagc
     3241 tggcgaggtg cacgatggtc tgcgcgccat attccgcccg ccccgcgaac aacatggtga
     3301 agcggaccat catcccgaaa attcccccgt cgcgctggcc gagaccggtc gtcacgaacc
     3361 ccgggtgaag gcaattcgcc gtcacgccgg tgccggcaag gcggcgcgcg agttcgcggg
     3421 tgaacaggat attggcaagc ttggaacggc cgtaggccgt cattaccgta tagtgcgttg
     3481 caagctgcag gtcatcgaaa tcaagcgtgc ggccgatatg cgcggcggag gcggtgttga
     3541 cgatgcggga cggcgccgca gcctggaggc attcgcgcaa gcaaccggtc agcacgaaat
     3601 acgccatgtg attggtggcg aaggtgcgtt cgagcccatc cggcgttaac tcgcggcggg
     3661 aaaacacgtt gccggcattg ttgataagca catcgatgcg cggctcggcg gtggcaatct
     3721 cctggccgac ccgcttcatg tcggcgagaa ccgacaggtc ggcaaaatgc gcccggtggg
     3781 cgagctcggg gccaacctcg cgcagtttcg caagagtggt ctctgcccgt tggggattcc
     3841 gcgccaccag aatgatacgc gctccaagcg cagcaagccg cgtagcggcg atctgtccga
     3901 tgccggaggt ggctccggtg atgacgacga ccttgccgtg aatggtggcc tcctacgttg
     3961 gaaatctcgg gatcgcatgc cgttgccttc tacactgata gtttggtcgg tttcagggcc
     4021 ggcaagccga gccagatcgg cacgtcgatt gtgaacggta ttatgttcgt tgtgggaatc
     4081 gatgccggga tcgaactcaa gtcgctcgaa cttgcttcat acgcagcctg gccattgatg
     4141 atggccaccg tcgtggcgtt ggcgatcgcc ttggtcatgc gcgagacctg tccgcggtag
     4201 cgccgcgcac tgaacgcgtc gttcgcgggg cagagcgatc gcaatatggc caccgctctg
     4261 cgaaacctac gcaaagttga gctaagcttt cgcaaagctc gccaatgccg ttcggttcct
     4321 gcttcttcga ggcccgctct tgcgagccac gccagagcgt tcctctc
//
LOCUS       DATILV010000350         2149 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3403345, whole genome shotgun sequence.
ACCESSION   DATILV010000350 DATILV010000000
VERSION     DATILV010000350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2149
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3403345"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            323..1787
                     /locus_tag="VLJ17_07945"
                     /pseudo
     CDS             323..1787
                     /locus_tag="VLJ17_07945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018329524.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
     gene            1819..2049
                     /locus_tag="VLJ17_07950"
     CDS             1819..2049
                     /locus_tag="VLJ17_07950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22945.1"
                     /translation="MALQDNPDHQPGLLRIAAASNAMTGRLERANKAVARLRRVNPTL
                     RVSNLKDVLGPYRHAESFAQYEEGLRRAGLPE"
BASE COUNT          451 a          600 c          676 g          422 t
ORIGIN      
        1 tgtccgagaa tgggatggac cggccgtgcc cccgtcccga accgctcaga gaatgagcgg
       61 ggggcttggg tcacttgcag acatgcccag cccaagaagg catgtctgct tcacgcctga
      121 aagcggacat caaccggcag gcagagccgg ctggtttggt cgcgaatgac ccatctcgga
      181 cattgggcaa tcggacatcg gcttattttt ctgctaaata gtttatttga ttttccggcc
      241 gaggtgcgtc ttgagcgaag agcgcgtgga acggcgactg gcggctattc ttgcggcgga
      301 catcgcggga tatagtcggc tgatgggtgc caacgaagaa ggtacgctag cccagttaaa
      361 gtcgattaga acagcgcttg tcgacccctc aatcgcggcg catcgcggtc acatcgttaa
      421 gactacgggc gacggaatgc tggtcgagtt tgccagcgcc gtcgatgcgg tgcgcaatgc
      481 ggttgaaatc cagcgcagca tggccgagca aaataccgcc gtgccgcagg atcaaaggat
      541 cgaattccgc atcggcattc atgtcggtga catcattttt gatgataatg atatcttcgg
      601 tgacggcgtc aatattgctg cccggcttga aggcatcgcc gaaccgggcg gggtctgcat
      661 gtccgacgat gcctatcggc aggttcgagg caaggttgag atcgcctgtg atgatatggg
      721 acagcagtcc cttagaaata tagctgagcc gatgcgagcg tggcgggtac ggctgactgg
      781 tcaagcccct tccgcagtaa aatcacgtct ggctatgagc caacctcagg tcctccctcc
      841 ccccgacaag ccgtccatcg ccgtgctccc gtttcagaac atgagcggcg atccggaaca
      901 ggaatacttt gccgatggaa tggccgagga catcatcacg gcgctgtccc gtttcaaggc
      961 gctatttgtc atcgcccgaa actccagctt cacctacaag gcgcgcgccg tcgacgtgaa
     1021 gcaggtgggg cgcgagcttg gggtgcgcta cgtgttggaa gggagcgttc gcaaggcggc
     1081 aaaccgagtg cgcatcacgg gacaactggt cgataccgct actggagcac atctttgggc
     1141 cgatcggttt gatggcgggc tcggcgacat cttcgatctg caggaccagg tgactgagag
     1201 cgttgtcggg gcgatcgcgc ctgcggtgga aaaagccgag atcgagcgcg ccaagcgcaa
     1261 gccgaccgcg agtctcgacg cttatgccct ctatttgcgc ggtctggccc ggctttatca
     1321 gtttggtaac cggcaagcga acgacgaggc attgcgcctg ttcaacagcg cgatcgagct
     1381 cgacccggaa tttgcctccg cctacggtcg tgcagccttt tgctacgtca ttgccaagat
     1441 caatggctgg gtttcagaca cagcgaacgc gattgccgaa gtgaagaggc tcacccaacg
     1501 ggcggtagag ttgggcaggg atgacgcgat cgcgctcgcc gctggcggga atgcgttagc
     1561 gtttgttgtt cgggatctcg gggtaggcgc cggcttagtc gatcgcgcgc ttgcgctcaa
     1621 ttccaatttg gccgaggcat ggaatttcgg cggctgggta aaaatctggc tcggcgagcc
     1681 ggaaacggcg atcgagcgct tcgcacgtgc catgcgcctg agcccacttg atccgcgggt
     1741 gacaagcaat gcgggccggg accgcgcatg cacatttctt ccagggccat catgacgaag
     1801 cggcatcgcg ggcggcaaat ggcactgcag gacaacccgg accatcaacc tggattatta
     1861 cggatcgccg ccgcaagcaa cgcaatgacc ggacggctgg agcgcgcaaa taaagcagtg
     1921 gctcggctaa gacgagtgaa tcccacgctt cgcgtctcca atctcaaaga cgtgctgggc
     1981 ccttatcggc atgccgaatc cttcgcacaa tacgaagaag gattgcggcg agccgggctg
     2041 cccgaatgac catcgcagaa agatgctcgc ccgttgggac gagatgatcg aataagcgcg
     2101 acttccgttg ttggcacata gctgccccgg acgtgtgcga cggcacgtc
//
LOCUS       DATILV010000351         5715 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1873092, whole genome shotgun sequence.
ACCESSION   DATILV010000351 DATILV010000000
VERSION     DATILV010000351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5715)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5715)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5715
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1873092"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(427..573)
                     /locus_tag="VLJ17_07955"
     CDS             complement(427..573)
                     /locus_tag="VLJ17_07955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22946.1"
                     /translation="MLAAQRIRLGEKIKRRRKSLWALPPLRVAVKFTQEFAQRSAEDG
                     PSAN"
     gene            complement(649..1980)
                     /locus_tag="VLJ17_07960"
     CDS             complement(649..1980)
                     /locus_tag="VLJ17_07960"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HSV22947.1"
                     /translation="MMSNLQTSRRWGVPVVAVIAVLCAPFVAGAQQVISSAAALQLSN
                     APPESVGMSTERLARLTTIFKKEIDDKKLPGAVMMIARQSKLVYAAALGARDPKNADA
                     MRTDAIFRIYSMTKPMVSVAAMILVEDGVLQLADPVAKWLPAFKDIKVLTSGGLVAPE
                     RAMTVQDLLRHTAGLAYGELTQNPAVKDALTKAGLVKPGVIDFDARDMAGTEEVERLA
                     KVPLLYQPGTIWEYSLATDVLGRVVEAASGKRLSEFMSERIFKPLKMDDTAFWVPPEK
                     KGRVVEPFEKDPIAGTPISLIDVSKSPANDSGGAGGVGTAGDYLRFAQMLANGGVLDG
                     QRVVSRTTIKLMTADHLGSRLPVAATAGGAVLGASTYTFGLGFAVRPSDGIAPVPGSA
                     GDFNWGGYAGTLFWVDPKEQLVAVFMVQSSGVLRSYHRTLFRQLVYQAIVD"
     gene            complement(2077..2925)
                     /locus_tag="VLJ17_07965"
     CDS             complement(2077..2925)
                     /locus_tag="VLJ17_07965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015918098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HSV22948.1"
                     /translation="MDHAQELRIIRRSYAKQIMARAMIDDPRIEAAFAEVRRENFLGP
                     GPWSIIGWAGDYVLTPSCDPVYLYMDSVVGIRPDRNLNSGQPSGHAVWIASAAPNPGC
                     HVVHVGAGTGYFTAILAHLIGRSGRLTAIEFDPELAACARANLSSIPNTQVIEGDGAA
                     VSFDLADVIYVNAGATRPADMWLDRLAEGGRLILPLTTDGFPNAPYGAIFRIERRADV
                     YHARWVSPVGIFPCEGARDPDSERALSAAFKRGGWERVQRLHRADDLTQERCWLRAPG
                     WCLAFS"
     gene            3146..3589
                     /locus_tag="VLJ17_07970"
     CDS             3146..3589
                     /locus_tag="VLJ17_07970"
                     /inference="COORDINATES: protein motif:HMM:NF024736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSV22949.1"
                     /translation="MLTTMTQSDWAIVLQIFRASRSRRGDKGWDDRKFWKALQYFAVH
                     NITWRALPSKFGNWSSRVETVLAFKPVRNLRSLLRCACGNGTAQLVQMFDSTVVRAHV
                     SAAGAGQSDQARRRIAPRCEKTTRNYASFVALALGFILIKSVHTA"
     gene            3610..3987
                     /locus_tag="VLJ17_07975"
     CDS             3610..3987
                     /locus_tag="VLJ17_07975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22950.1"
                     /translation="MQRYDPLKAPDPEEWLTLDEQERIDLVQDYHRRMHTRLQNAKVH
                     AMAHVIVENQIALGDETPVQRTAQRLMDEGLDRHEAIHAIGMVLFEFMHDLMKAPVSG
                     SDPNVSYFAALERLTAEDWRRSG"
     gene            complement(4094..5197)
                     /locus_tag="VLJ17_07980"
     CDS             complement(4094..5197)
                     /locus_tag="VLJ17_07980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HSV22951.1"
                     /translation="MASILDHIGTPLQLVALFLLLVAGIARLLVHSGAWKSSPATTQL
                     VINRIFQAALAALIIGTVSPTVAPTLDRWLNSEETFHGAVLSTTGEAISGATVNLITI
                     ATVSTNVLGHFDITVPRNRAVKEYKLQVKAPGFETPPVLTKSAAAMKDVEIRLTPAPP
                     ELIKALEPTLIVGQYFGIPFVLVTLRVENTGKSLTSINEIRGNLSGKDASFVLSAAYW
                     TIVNPFGPLAPVTGPIPIPAGTNFDLRVVMMPGANFAKLYRQISTLPEYSSQQPCGRN
                     YTGAIDPMTDSAFRIVKAFADEHFAWRDDDWHLQLDMTADNQAKTFQRDFSLTASDID
                     RLRASIDLIRQCLSVSMTAPLAQDGQLANFLSK"
     gene            complement(5226..>5715)
                     /locus_tag="VLJ17_07985"
     CDS             complement(5226..>5715)
                     /locus_tag="VLJ17_07985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidase M15"
                     /protein_id="HSV22952.1"
                     /translation="KSYVIGGLDPDFREQLYHAGRAMDANGLRWSMLSAFRDDYRQSI
                     AAGFKAHGGNSQHGGSNATGGYGYGRAIDITSAEGDSAVIWHWIDVHGGKFGLRRPMP
                     GADPAHIQPRNTFHDLARQLREARVKLADKLSGIETEPAAGKTKVADRSDEMSEGRRF
                     RR"
BASE COUNT         1141 a         1718 c         1730 g         1126 t
ORIGIN      
        1 cgccaagctg tacgagatcg gcgccggcac cagcgaaatc cgccgcatgc tgatcggaag
       61 agagatttac gagaagacgc ggtgaggggg cgtttgaaat ctgctcgcaa gcaagaggca
      121 aagctgcctg tgttgtgtgc cgccctcgtc gaagtcgcgc aaggcggggc ccttccaccc
      181 cgttcgattt ttggggcctt cattgctcat gctcgaaagc ggcttcccgg tcgcagacat
      241 tgtgatggtg caatcgccgg catgaaagag aaagccgaca ttctccggtt tgcatccgct
      301 tttacccgga ggacccgcac gagtggcaag ctggtgcggg cggttgatca cctgtggaac
      361 cgtcgtcaat caaaaaaggt ctacccatga aacgccctga tactttggcc gaagtggccc
      421 ggagggttag ttagcgctgg ggccgtcttc ggcgctacgt tgagcgaatt cctgggtgaa
      481 ttttacggcc acccggagcg gcggcaaagc ccacaagctt ttccgccgcc gcttgatttt
      541 ttcaccgagg cggatccgct gcgccgccag catgccacgc actccggcgc gctaagccgc
      601 atcttcggat cgaaaccaaa cgatggccgt gccaccgcac gcattccatc agtcgacgat
      661 cgcctgatag acgagttgcc ggaacagcgt tcggtggtac gagcgcaaga caccgcttga
      721 ttggaccata aagaccgcga ccaattgctc cttcggatcg acccagaata gcgtgccggc
      781 atagcctccc cagttgaagt ccccggccga gcccggaacc ggtgcgatac cgtcggacgg
      841 ccgcaccgcg aacccgaggc caaaggtgta cgtggatgcc cccagcacgg ccccgccggc
      901 tgttgcggcc acaggcaggc gtgatccaag atggtcggcg gtcataagtt tgatggtggt
      961 gcggctcact acgcgctggc catccagcac gccgccgttc gccagcattt gtgcaaaccg
     1021 caaataatcg ccggcggtcc ccacgccgcc tgcgccgcca gagtcatttg ccggcgactt
     1081 cgacacgtcg atcagcgaga tcggagtacc ggcgatcgga tccttttcga agggttcgac
     1141 cacgcgaccc tttttctccg gtggcaccca gaacgccgtg tcgtccattt tgagcggctt
     1201 gaagatgcgc tcgctcatga attcgcttaa gcgcttgcca gaggcggctt ccaccacgcg
     1261 ccccagcaca tcggtggcaa ggctgtactc ccagatggtg cccggctgat aaagcaatgg
     1321 aactttggcc agacgctcca cctcttccgt ccccgccatg tcgcgcgcgt cgaaatcgat
     1381 gacaccaggc ttgaccagtc ccgccttagt cagggcgtct ttgactgcag ggttctgcgt
     1441 gagctcgccg taggcaaggc ccgccgtatg ccgcaagaga tcttgaaccg tcatggcccg
     1501 ttcgggtgcc accaacccac cgctggtgag gaccttgatg tctttaaaag cgggcagcca
     1561 ttttgcgacc ggatcggcca gttgcaagac gccgtcctcg accaggatca tggcggcaac
     1621 cgaaaccatg ggcttggtca tcgaataaat gcggaatatg gcgtcggttc gcatggcatc
     1681 ggcgttcttc ggatcgcgcg caccgagggc ggccgcatag acgagcttgc tctggcgcgc
     1741 gatcatcatg acggcgcccg gcagtttctt gtcgtcgatt tccttcttga agatcgtcgt
     1801 cagtcgcgcg agccgctctg ttgacatgcc gacgctttca ggcggggcgt tgctgagttg
     1861 gagagccgcg gcggacgata tgacctgctg ggcgccggcg acgaacggcg cgcacaaaac
     1921 agcaataacg gcgacgacag gcactcccca acgtcgcgaa gtctgtaagt tggacatcat
     1981 gggctctcct ccaagaatgt tctctccact gcgttcattt catgatttcg gtggaacagc
     2041 tgcaagaagt tacattatat ccaacaaacc tctccgtcag gaaaaagcca aacaccatcc
     2101 cggcgcgcgc agccagcatc gctcttgcgt cagatcatct gcccgatgga gcctctgcac
     2161 ccgctcccaa ccgcctcttt tgaaggcagc agagagtgcg cgctcggagt ccgggtcgcg
     2221 cgctccctcg cagggaaaga tgccgactgg cgatacccat ctggcatggt atacgtccgc
     2281 gcgccgctca atccggaaga tcgcgccgta gggagcgttc gggaagccgt cggtggtgag
     2341 gggtagtata agccgcccgc cctcggccaa tctgtccagc cacatgtcgg ctggtcgggt
     2401 cgcccctgca ttcacgtata tgacatcggc caaatcaaat gatacggccg ccccatcgcc
     2461 ctcaatgacc tgggtattgg gaatcgacga tagattggct cgcgcgcaag ccgcaagttc
     2521 cggatcaaac tcgatcgctg tcagccttcc ggacctccct atgagatgag ccaggatggc
     2581 cgtgaagtag ccagtccccg caccgacatg cacgacgtgg cagcccggat ttggtgcggc
     2641 gctggcgatc caaaccgcat gtcccgaagg ctgcccactg ttgaggttgc gatcgggccg
     2701 aatgccgacg acgctgtcca tgtaaagata aaccgggtcg caactcggcg tcaggacata
     2761 gtcgccggcc catccaatga tcgaccaggg gcctgggcca aggaaattct cgcgtcgcac
     2821 ttcggcgaag gctgcttcaa tccgagggtc gtcgatcatg gcccttgcca tgatttgctt
     2881 agcgtaggag cgtcggatga tacgcaattc ctgtgcgtga tccatgtgtc accgaggtcc
     2941 cgtcgccatc cgccaggctg tactcttgcg cgtcattttt gcaccagggc gtggaaaagc
     3001 tcactgcggc attatttcga ggtggccagt attacggaac accgtttcta ggccgcgtgg
     3061 gcggatttga gcgagtatag ggcggtagga ttcccaaatc agtttttctg tgaccgatgg
     3121 gtggtcggtt tgaggaggac cgaccatgct cacgaccatg acgcaatccg actgggcgat
     3181 tgtcttgcag atattccggg catcgcgctc gcggcgcggc gacaagggct gggacgaccg
     3241 caagttttgg aaggcactgc agtattttgc ggtccacaac atcacatggc gcgctcttcc
     3301 aagcaagttc gggaactgga gcagccgtgt ggaaacggtt ctggcgttta agccagtccg
     3361 gaaccttcga agccttcttc gatgcgcttg cggcaatggg accgcgcagc tggtgcagat
     3421 gttcgattcc accgtggtgc gcgcccatgt ctcggcagct ggcgcagggc aaagcgatca
     3481 ggcgcgccgc cgcatcgcgc cacgatgcga gaagaccaca cgcaactacg cgtccttcgt
     3541 cgctctcgct ttgggcttca tcttaatcaa atctgtccac acggcctaaa gtcacagcgg
     3601 agacagtcca tgcaacgcta cgatcccctc aaggcgcccg acccggaaga atggctcacg
     3661 ctggatgagc aagagcgcat cgacctcgtc caggactacc atcgtcgcat gcatactcgc
     3721 ttgcagaacg cgaaggtgca cgcgatggca cacgtgatcg tcgagaacca aatcgcgctt
     3781 ggcgatgaaa cgcccgtgca gcgcacggcg caacgcctga tggacgaggg cctcgaccgc
     3841 cacgaggcga tccacgccat cggcatggtc ctcttcgaat tcatgcatga cctgatgaag
     3901 gcgcccgtat ctggtagcga cccgaacgtg tcatattttg cggcgctcga gaggcttacg
     3961 gcggaagact ggcggcgatc aggatgacgg cttcgcacgc ggcgcagcga tacttcaagc
     4021 gccgctgcaa cacggatgca agccttaggt ttggtcgttc gtcgtcgtat ggttcgaaat
     4081 cgcgagttgg accctacttc gacaggaaat ttgccaactg gccgtcctgt gccaggggtg
     4141 ccgtcatgct caccgacaag cactgccgga tcaggtcgat cgaagcacgg agccgatcga
     4201 tgtcgctggc ggtcaagctg aaatcgcgct ggaaggtctt cgcctggttg tccgccgtca
     4261 tgtcgagttg caaatgccaa tcgtcgtcgc gccaggcgaa atgttcgtcg gcaaatgctt
     4321 tgacgatccg gaatgcgctg tcggtcatcg gatcgatcgc tccagtgtaa ttccgcccac
     4381 aaggctgctg cgagctgtac tctggcagcg tggaaatttg acggtaaagc ttcgcgaagt
     4441 ttgcaccggg catcatgaca acccgaaggt cgaagttggt cccggcgggg atcggaatcg
     4501 gccccgtcac gggtgcgagc ggaccgaacg gattgacgat cgtccaatac gccgccgaca
     4561 gcacaaacga ggcgtccttg cccgacaggt tgccgcgtat ttcattaatt gacgtcagcg
     4621 acttgccggt attctcgacg cgaagcgtca cgagcacgaa tggaatgcca aagtattggc
     4681 cgacaataag ggtcggttcg agtgccttga tgagctccgg gggcgcgggc gtcagccgga
     4741 tttcgacatc cttcatggcc gcggcgctct tggtcaggac agggggcgtc tcaaagccgg
     4801 gcgccttgac ctgaagtttg tactccttga cggcgcggtt gcgcggaacc gttatgtcga
     4861 aatgcccaag tacattggtc gatactgtcg caatggtaat cagattgacg gtcgcgccgg
     4921 agattgcctc gccggtcgtg gacagaacgg ctccgtggaa ggtctcctcg ctgtttagcc
     4981 agcgatccaa agtcggtgcg accgtcgggc tgacggtacc gatgatgaga gccgccaagg
     5041 cagcttgaaa gatgcggttg atgacgagtt gtgtggtcgc gggcgaggat ttccacgcgc
     5101 ccgagtgaac cagcagtcgc gcaatgccgg ccactagcaa caggaacagg gcaaccaatt
     5161 gaagcggagt gccaatgtga tcgaggatcg aggccattcg gtagctcacc tgtcagcgaa
     5221 acgcgtcatc tgcggaagcg acggccttcg ctcatttcat ccgaccggtc tgcaaccttc
     5281 gtcttgccgg cggccggctc ggtctcgatc ccgctcagct tgtcagcaag tttgacgcgc
     5341 gcctctcgca attgacgggc gagatcatgg aatgtgtttc gcggctggat gtgcgccggg
     5401 tcagcgccgg gcatcgggcg ccgcagcccg aactttcctc catgaacgtc gatccaatgc
     5461 caaatcacag cggaatcgcc ctcggcgctg gtgatatcga tggcacggcc gtagccatag
     5521 ccgccggtcg cgttgctgcc gccgtgctgg gagttgccgc catgcgcctt gaagcctgcg
     5581 gcgatggatt ggcgatagtc atcgcgaaat gcgctcagca tcgaccatcg gagtccgttc
     5641 gcgtccatcg cgcgaccggc gtggtagagc tgctcgcgga aatccgggtc caggcccccg
     5701 atcacataag acttc
//
LOCUS       DATILV010000352         1551 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1362278, whole genome shotgun sequence.
ACCESSION   DATILV010000352 DATILV010000000
VERSION     DATILV010000352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1551
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1362278"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1485)
                     /locus_tag="VLJ17_07990"
     CDS             complement(<1..1485)
                     /locus_tag="VLJ17_07990"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSV22953.1"
                     /translation="MKASFRDYINTLRKNDELLEIAKPVDLRDVAALVAQSEKALLFR
                     NLPGYSMPLVSGLLQSRNRIALGMGVAYEGVAAKLGNAMNKPIKPKRVTSAPVKEVIL
                     TGKKVNLYDLPVPVFSVMDGGPMITGGVVIAEDPEFGMNAGMYRLMLKERNITGIDIV
                     TPNNMRRFAERALAKKKPLPVSISIGTHPYELVASTFKANLGVNELTFAGGLRDEPLR
                     LADGETVPVPCIADAEIVLEGEILPEGWVHPEGPFCEFNRLMGGLHMNPRVRIKSIMH
                     RKDAMYYALQMPWENIWMSAPIYEAAARRVLFEAGVQTAAINVTPGGCCHWHIVASIK
                     KVPGDGKNAIMALLSIADIKHVTIVDDDIDVFDPVDVEWAVATRVQADRDVVIVSNAR
                     SKPLDPSLPLPVHGKVPTTAKMGIDATIPENIPAERYKRIVYFNQGKVDLKNYLGAVE
                     EGKKSSAAAKPSEGIDELTGKIVAALEKSHCFFADLLERFPKADY"
BASE COUNT          307 a          456 c          438 g          350 t
ORIGIN      
        1 gtaatccgct ttgggaaatc tctctaggag atccgcgaag aaacaatggg atttttcgag
       61 agccgcgaca atctttcccg taagctcgtc gatgccttct gacggcttcg ccgcggcact
      121 tgatttcttc ccttcttcga ctgcgccgag atagtttttt agatcgacct tgccttgatt
      181 gaaataaacg atgcgcttgt agcgctcggc aggaatattt tccgggatcg tcgcgtcgat
      241 gcccatcttg gccgtcgtcg ggactttgcc gtgaacgggc aagggcagcg acggatcgag
      301 cggtttggag cgggcgttgg aaacaatcac aacgtcgcgg tcggcttgga cacgggtggc
      361 gacggcccac tccacgtcca ccggatcgaa gacgtcgatg tcgtcgtcga cgatggtcac
      421 gtgcttgata tcggcgatcg acaaaagcgc catgatcgcg ttcttgccgt caccgggcac
      481 ctttttaatc gacgcgacga tgtgccaatg gcagcagccg ccgggggtga cattgatcgc
      541 cgccgtctgc acacccgcct cgaagagcac tcgccgggcg gcagcttcgt agatcggcgc
      601 gctcatccag atattttccc aaggcatctg cagcgcgtaa tacatcgcgt ctttgcggtg
      661 catgatcgat ttgattctga cgcgcgggtt catgtgcagg ccgcccatca accggttgaa
      721 ttcgcagaac ggtccttcgg gatgaaccca tccttccggc aggatctccc cttccaaaac
      781 gatttccgcg tcggcgatac acggtaccgg caccgtttcg ccgtccgcga gtcgcaaagg
      841 ttcatcgcgc aggccgccgg caaacgtcag ctcattgacg ccgaggttcg ccttgaaagt
      901 cgacgcgacc aactcgtagg gatgggtgcc gatggagatc gaaaccggca gcggtttctt
      961 tttcgcaagc gcgcgctcgg cgaagcggcg catgttgttc ggcgtgacga tgtcgatgcc
     1021 ggtgatgttt ctttctttga gcatcagccg gtacatgccg gcgttcatac cgaactcggg
     1081 atcttcggcg ataacgacgc cgccggtgat catcggcccg ccgtccatca ccgaaaacac
     1141 cggcacgggc aagtcgtaaa gattcacttt cttaccagtg agaatgactt ctttcacagg
     1201 ggcgctggtc acgcgcttcg gcttgatcgg cttgttcatc gcgttgccga gcttggcggc
     1261 aacgccttca taggcgacac ccatgccaag agcaatccgg ttgcgcgact gcagcaaccc
     1321 cgagaccaac ggcatcgaat atcccggcaa atttctaaac agcagcgcct tttccgattg
     1381 cgctaccagc gcggcgacgt cgcgcaggtc aacgggtttg gcgatttcca aaagctcgtc
     1441 gtttttgcga agtgtgttga tgtagtcgcg aaagctagct ttcatctcgt atctcccggc
     1501 cgcaaccaaa ttttttcggc gagacttaac acgccgattc cccgaagtcc a
//
LOCUS       DATILV010000353         2977 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2640701, whole genome shotgun sequence.
ACCESSION   DATILV010000353 DATILV010000000
VERSION     DATILV010000353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2977)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2977)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2977
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2640701"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..929
                     /locus_tag="VLJ17_07995"
     CDS             <1..929
                     /locus_tag="VLJ17_07995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22954.1"
                     /translation="QYAFGLAQSVEAQISGLAGIDLSYIESLVLGRVVATACKANLEA
                     ELKKQADDICNRLHDAFERECKARQLPFEWLSFEGDPIETLCSAAETRDLVITWHDTT
                     FRGNANEQLSEMLPKLLLTSPRPIIICSDEVSAADSILIAYDGSLTAMRAVQMFALLQ
                     IGLGQLISRHFGRYKQGAGSAKDHPCRGLPSNSWPPGRRKPYRISSTSGKGAMRRSRK
                     PENRDDGHGRVRSSWDSKPFVWFDDAHSGGKPTLHALPVSLIDALLTRRRREYARVSI
                     RHSAHGIDADCSTSLSGSRRNETMEKRRGVPQ"
     gene            951..2219
                     /locus_tag="VLJ17_08000"
     CDS             951..2219
                     /locus_tag="VLJ17_08000"
                     /inference="COORDINATES: protein motif:HMM:NF021524.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2254 domain-containing protein"
                     /protein_id="HSV22955.1"
                     /translation="MRPWLIPMIYVGGSVVCGLGLPRLEYAYLASYAFNLSVASAQAY
                     LAAAASGMMALMGIVFALAFVTVQFSAIAYSPRLVLWFARDHSLFHSLGTFAATFIFA
                     LFTLAWVDREASGWVPQFCGVLVVIMLSFSMLLFSRLIQRLTDLQITNVLQLIGDRGR
                     KVIAGMFLHLDDNRNPQGGDDKKASGGMQLGPITQTLKYSGEPRTIAKLDIESLVRLA
                     QRANGTIVMQFAVGDTLVVDTVLLQVHGAEDRLSETELMRAIHLERERTFEQDPKYPI
                     RLLVDVAIKALSPAINDPTTAVQTIDEIEDLLRRLGRRKLDAGYAIDGKGALRLVFPM
                     PTWEDYLALAFDEIRQYGATSVQVMRRLRAALAGLTESLPSPERAGALQRYLKHLDLV
                     IERSPFDAEDRAMARRGDRQGLGLSRAPTK"
     gene            2548..>2977
                     /locus_tag="VLJ17_08005"
     CDS             2548..>2977
                     /locus_tag="VLJ17_08005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015116 - sulfate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HSV22956.1"
                     /translation="MVIGSRPTEGPTKRQSGPTWLRHVPAASWLADYRIGWLASDIVA
                     GVTLAAYAIPVSLAYAGLAGLPPQAGVYGYLLGGLGYALLGSSRQLAIGPTSAISLMI
                     AGAVGAMAGGDAERYGQIASLAGFTVALLCLIAWLLRLSML"
BASE COUNT          593 a          842 c          886 g          656 t
ORIGIN      
        1 ggcagtacgc gttcggattg gcgcaaagcg tcgaagccca gatctcagga ctggccggta
       61 tcgacctgtc gtatattgaa tcgcttgtgc ttgggagggt cgttgcaacc gcatgcaaag
      121 ctaatctgga agcggagctg aaaaagcaag ccgacgatat ttgcaaccgg ttgcatgacg
      181 ccttcgagag ggaatgcaag gctcgtcagc ttccgtttga atggctttca ttcgagggcg
      241 atccgattga aacactatgc tcggcagccg agacccgaga tttggtgata acctggcatg
      301 atacgacatt tcgcggcaat gccaatgagc agctatccga aatgcttccg aaactgctgt
      361 tgacgtcgcc gcgaccgatc atcatctgct ccgacgaggt atctgctgcc gacagcattc
      421 tgattgccta tgacggtagc ctaacggcga tgcgggccgt tcagatgttt gcccttcttc
      481 aaatcggact aggtcagctc atttcacgtc atttcggtcg atacaagcaa ggagcgggca
      541 gcgcgaagga ccacccgtgt cgcggattac cttcgaattc atggccaccg ggtcgacgca
      601 agccctatcg tatctcgagc acatccggca aaggcgctat gcgccgaagt cgcaaaccgg
      661 aaaatcgaga cgatggtcat gggcgcgtac ggtcatcgtg ggattcgaaa ccttttgttt
      721 ggttcgacga cgcgcactct ggtggaaaac cgaccctgca cgctcttcct gtatcattga
      781 tcgatgcatt gttgacacgg aggcgtcgcg aatatgcgcg cgtctcaatc aggcactctg
      841 cacacggcat cgatgctgat tgcagcacat cactctctgg ctcccgaaga aacgagacga
      901 tggagaagcg tcgaggagta ccccagtagc caagcggaga acgacagcag atgcgacctt
      961 ggctaattcc catgatttat gtgggtggaa gtgtcgtgtg cgggttgggg ctgccgcgac
     1021 tcgagtatgc ataccttgcg tcctatgcat ttaacttatc cgttgcctcg gcgcaggcgt
     1081 acctcgcggc cgcggcgtcg gggatgatgg cgctcatggg catcgtgttc gccctggcct
     1141 tcgtcacggt acaattcagc gcaatcgcct actcgccgcg actggtgctt tggtttgccc
     1201 gcgatcattc gctttttcat tcgctcggga ccttcgccgc cacgtttatc tttgctctct
     1261 ttactctcgc gtgggtcgat cgggaagcgt ccggctgggt gccgcagttc tgcggcgtgc
     1321 tcgtggtgat catgctcagc ttcagtatgc tgctgttctc tcggctgatt cagcggctaa
     1381 ccgatctgca gatcacgaac gtgcttcaat tgatcggcga tagaggtcgc aaggtcattg
     1441 ccggcatgtt ccttcatcta gatgacaatc ggaatcccca agggggcgat gacaagaagg
     1501 cttccggggg tatgcagctt ggcccaatca cccagacgct gaagtattca ggtgagccgc
     1561 gcacgatcgc caagctggat atcgaatctc tcgttcggct ggcacaacgg gccaacggaa
     1621 cgatcgttat gcagttcgca gtcggcgaca ccttggtcgt agacacggtg ctcctgcagg
     1681 ttcacggcgc cgaagaccgg ctgtcggaaa cagagctgat gcgggcaatt cacctcgaga
     1741 gggagcgcac tttcgagcaa gatcccaaat atccgatccg acttttggtt gatgtcgcca
     1801 tcaaggcgtt gtctcccgcc atcaatgatc cgacgacggc ggttcagacg atagacgaga
     1861 ttgaggatct tttgcgtcgc ctgggacggc gcaaattgga tgccggctat gccatcgacg
     1921 ggaagggggc cctgcgcctc gtctttccca tgccgacgtg ggaggattat ctggccctcg
     1981 ctttcgacga gatccggcaa tatggcgcga catctgtcca ggtcatgcgc cgcttgcggg
     2041 ccgccctggc cggtctgact gagtcgctac cgagccccga gcgcgcgggt gcgctgcaac
     2101 gatatcttaa gcacctcgat ttggtcatcg agcgttcgcc attcgacgcc gaggatcggg
     2161 cgatggcgcg tcggggggac cggcaggggc tcggcctctc ccgcgcgccg acaaaataat
     2221 ggagaagggt catgatgaag ctgacgcttg ctgcatcagg cttgatcgcc gcgctagacg
     2281 tagctcccac ggcacaggtg acgctcggcg tttcaaagat tgcatgcgac taattcgccg
     2341 gttacaaaat cacaaatcgg caaaacatcg cgatgaccga gttttgtgat ggcaagtgcg
     2401 gcaatacgat catcgacacc taagagcttg ccgccaatgc gaagaaacta caagatcact
     2461 gcgttcggaa tcctcgaatt tcgatcatgc agtcagtcga aacgttgctg gagtcgaaac
     2521 tagacgtcgc attcatgcgg ttgaacaatg gtcatcggat cgcgaccgac tgaaggtcca
     2581 acgaagcgcc agagcggacc gacgtggctt cgccatgtgc ccgcggcttc ctggctggcg
     2641 gattaccgga tcggctggtt ggccagcgat atcgtcgccg gcgtcacgct ggcggcctat
     2701 gccatcccgg tttccctggc ttatgccggg cttgcgggat tgccccctca agccggcgtc
     2761 tacggctatt tgctcggtgg gctcggctat gccttgctcg ggtcgtcgcg ccaactggcg
     2821 atcggaccaa cctccgccat ctctctcatg attgccggcg cggttggggc gatggccggt
     2881 ggagatgcgg aacgctacgg ccagatcgcc agtcttgcgg gcttcaccgt agccctgctt
     2941 tgcctgatcg catggctgct gcgactcagc atgctgg
//
LOCUS       DATILV010000354         1813 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2895047, whole genome shotgun sequence.
ACCESSION   DATILV010000354 DATILV010000000
VERSION     DATILV010000354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1813)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1813)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1813
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2895047"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(74..1273)
                     /locus_tag="VLJ17_08010"
     CDS             complement(74..1273)
                     /locus_tag="VLJ17_08010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV22957.1"
                     /translation="MRIALRALARNKLRAFLTMLGIIIGVGAVIAMVAIGEGAKSTIR
                     AQIAALGTNVLIVLPGSNVQGGVRAGFGNVTTLLDSDAKAMARELPSVAFVSPVLRRQ
                     DQVVAGNLNWGTLAQGVAPEFQQIRDWQVAEGRFLHEGDMDSAAKVAVIGQTVARQLF
                     GNDDALDAVIRIRNIPFRVVGILGAKGQTGQGTDQDDTIMIPYTTMQKRLMRITWVQS
                     IVVKAVSAERVEEAQEQITLLLRQRHRIGPEREDDFNVRNLSDIAEAATTTARVMAVL
                     LGSVASISLLVGGIGIMNIMLVSVTERTREIGIRMAVGARSRDIMLQFLVEAVVMAAT
                     GGLIGILLGVGSSEVIKQWAQWPTLIDPAIIAIAFLFSGAVGVFFGFYPAKKAANLDP
                     IDALRYE"
     gene            complement(1292..>1813)
                     /locus_tag="VLJ17_08015"
     CDS             complement(1292..>1813)
                     /locus_tag="VLJ17_08015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018321702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV22958.1"
                     /translation="YFLEGHEVGSLKPDQWAYIRNKRIGFVFQGFNLLSRTTALENVE
                     LPMMYNGFAGQERHQRAIEVLSLVGLDKRLDHTPNQLSGGQQQRVAIARALVNRPPLI
                     LADEPTGNLDSATSNEIMALFQQLNTGQGITIILVTHEADIAAYARRQIVFRDGLVIS
                     DRVSEQVIAKVEH"
BASE COUNT          384 a          552 c          524 g          353 t
ORIGIN      
        1 cgcttcgtgc cctgacaact ttctaccgca tgcaaacaaa ggaaggagcc cgaactcggc
       61 aatccaagct tttttactcg tatctcagcg cgtcaatagg atccaagttg gccgccttct
      121 tggcggggta aaaaccgaag aagacgccga cggcgccgga gaagagaaag gcgatcgcga
      181 tgatcgcagg atcgataaga gtcggccact gcgcccattg tttgatgact tcggagctgc
      241 cgactccgag aagaatcccg atcaagccgc cggtggcggc catgacgacg gcctcgacga
      301 gaaattgcag catgatgtcg cggctgcgcg cgcccacggc catacggatg ccgatctcgc
      361 gcgtcctttc cgtcaccgac acgagcatga tgttcatgat gccgatgccg ccgacgagga
      421 gagaaatcga cgcgacgctg ccgagcaaga cggccatgac gcgggcggtg gtcgtggccg
      481 cctcggcaat atcggataga ttgcgcacgt tgaaatcgtc ttcgcgctcg ggaccgatgc
      541 ggtggcgctg gcgcaaaagc aaagtaatct gttcctgggc ttcttcgacc cgctcggcgc
      601 tcaccgcctt gacgacgatg ctctgaaccc aggtgatgcg catgagccgc ttctgcatgg
      661 tcgtgtaggg aatcatgatc gtatcgtctt gatccgtgcc ctgccccgtc tgtccttttg
      721 cgccgagtat accgaccaca cggaacggga tgtttcggat gcggatgacc gcgtccaaag
      781 catcgtcgtt gccgaagagc tggcgcgcca ccgtttggcc gatgacggcg actttggcgg
      841 cgctgtccat gtcgccctcg tgaagaaaac ggccctcagc cacttgccag tcgcggatct
      901 gctggaactc cggcgcgact ccttgggcca aagtgcccca gttcaagttt cccgcgacca
      961 cttgatcctg acgccgcaac accggcgaga caaacgccac cgaaggcaac tcgcgcgcca
     1021 tcgccttagc gtcgctatcg agcagggtag tgacgttgcc gaagccggct ctaacgccgc
     1081 cctgcacgtt gcttccaggc aacacgatca gaacattcgt gccaagcgcg gcgatctgcg
     1141 cgcggatcgt cgacttggcg ccttcaccga tcgcgaccat cgcgatcacg gcgccgacgc
     1201 cgatgatgat gccgagcatt gtcaagaaag cccggagctt atttctcgcg agcgcgcgca
     1261 gcgcgatgcg caaggtcata aaggcttgca cttaatgctc caccttagcg atcacttgtt
     1321 cgctgacccg atcggaaatc accaagccgt cgcgaaagac aatctgccgc ctggcatacg
     1381 ccgcaatatc ggcttcgtgt gtgacgagaa taatcgtgat gccctgcccc gtattgagtt
     1441 gctgaaacaa ggccatgatt tcgttgctgg tggcggaatc gagattgccc gtgggctcat
     1501 cggcaagaat cagcggcggc cgattgacca gcgcgcgtgc gatcgcaacc cgctgttgtt
     1561 gaccgccgga aagctggttg ggcgtatggt cgaggcgctt atcaagtcca actaaagaca
     1621 gcacttcgat cgcccgctga tgccgttctt gacccgcaaa gccgttgtac atcatcggca
     1681 gctcgacgtt ttcgagcgca gtcgtgcggg aaagcaaatt gaaaccttga aagacaaagc
     1741 cgatccgctt gttgcggata tacgcccact gatccggctt cagcgagccg acctcatgtc
     1801 cctccaagaa ata
//
LOCUS       DATILV010000355         2801 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4683758, whole genome shotgun sequence.
ACCESSION   DATILV010000355 DATILV010000000
VERSION     DATILV010000355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2801)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2801)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2801
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4683758"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..559)
                     /locus_tag="VLJ17_08020"
     CDS             complement(<1..559)
                     /locus_tag="VLJ17_08020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22959.1"
                     /translation="MVQLDRARGGFTVKRAASIDLPTGLVRATFDESNIDDPAELTRA
                     LSDLLAAAGLLHQRKWSVTLPETSTRAAVLALEGPPTSRRELEEVLEWKIERSFGAPL
                     SELRVSRDQLAPDSQRQSRYLITAIRLSVLAEYEATFAGLGWQAGLILPRHAGEEQWL
                     RNGQQGDGLLLTAHAEGFTAVLMRNN"
     gene            complement(731..1210)
                     /locus_tag="VLJ17_08025"
     CDS             complement(731..1210)
                     /locus_tag="VLJ17_08025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HSV22960.1"
                     /translation="MTGRKSKQKAVSGKQSVAIIVKQRGLLTAHRSLLIAAGFTLLEL
                     MIVISIIIILASIALPQYQKTIMHARETVLRDDLFKMRSLLDEYAADKGKLPQSLDDL
                     VTEHYLREVPKDPITDNKDWAVVTGEDPFSNEGGTGVTDVHSSSGDVSTEGTPYSEW"
     gene            complement(1200..1952)
                     /locus_tag="VLJ17_08030"
     CDS             complement(1200..1952)
                     /locus_tag="VLJ17_08030"
                     /inference="COORDINATES: protein motif:HMM:TIGR02532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HSV22961.1"
                     /translation="MNYKSESRKHTEESRKRQVPVLLPTADCRLPYGVRGFSLIELVI
                     TITVLAILTLGTIPLVQVAVKRQKEAELREALRTMREAIDQFHREALVGAQAQANQQQ
                     PQQQADPNSGQVRPNTAAPNLNVFADPRVRVYITDQTIFTADNIDRYPPDLDTLVKGV
                     SVLPITSGSLGRRGNANVTALEAATEESTIPKTKTYLRRIPVDPMTGKADWDFRSCYD
                     PADSTSWGGENVFDVHSKSKGTSLNGEKYSDW"
     gene            complement(1952..>2801)
                     /locus_tag="VLJ17_08035"
     CDS             complement(1952..>2801)
                     /locus_tag="VLJ17_08035"
                     /inference="COORDINATES: protein motif:HMM:NF013156.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_process: GO:0000272 - polysaccharide catabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cohesin domain-containing protein"
                     /protein_id="HSV22962.1"
                     /translation="ADAQVAYVPAANPAVAAQPNANTSTTSDVVAEQVLPVSQSNNVA
                     PPRTQTAALVVPAKRDGVAGSTEAAMPQPKAVASNSQPEPPPPQKMDIASALKSIVSP
                     TTGVSGTAASAKQDANVSPVVEELSPKSQRTDFSAKPNAVAPGVVGLSLSPGQSEMRV
                     GEKRQLALGVRTGAPLGLAVLTLRFDPRVTKINSVTPGALFANAKTAPALTQSMDQSG
                     MLLVSLAPAAGSPVSGEGVLLNIEFEALAGGDSLLAFDLANVHLVASDGRNILLQAEP
                     VKLTVK"
BASE COUNT          564 a          838 c          786 g          613 t
ORIGIN      
        1 ggttgttgcg catgagcacc gccgtaaagc cttcggcgtg ggcagtcagc aacaacccgt
       61 cgccttgttg accattgcgc aaccattgct cttcgcccgc atgacgcggc aggatcaatc
      121 cggcctgcca tcccaggccc gcgaaagtcg cttcgtattc agccaggacc gagagccgga
      181 tcgcggtaat cagatagcgc gactgccttt gcgagtcagg cgccaactgg tcccgggaca
      241 cacgcagttc ggacagcggg gcgccaaagc tgcgctctat tttccactca agcacctctt
      301 ccaactcccg gcgtgaagtg ggcgggcctt ccagcgcgag gacagcggcg cgcgtagaag
      361 tttccggcaa ggtcaccgac catttgcgct ggtgcagcag accggcggcg gccagcagat
      421 ccgagagagc tctggttaac tccgccgggt cgtcgatatt actttcatca aaggtcgcgc
      481 gcaccaaacc agttggcaga tcgatcgagg ctgcgcgctt gactgtgaat cccccgcgcg
      541 cccggtcgag ctggaccact gcagcgccgc cactatcgat accgaccgca cagggcggga
      601 aacggggctt caggagttta ccgagaggat ttgcaggcat taagttattt tcgattttgg
      661 atcgtggatt tgcgattggt tctgtctcga accgaaatca aaaatcgcaa atcaaaaatc
      721 cagaatgcct ttaccattca ctatacggcg tgccttcggt cgaaacgtcg cccgatgaac
      781 tgtgcacgtc agtaactccg gtcccacctt cattcgaaaa aggatcttcg ccggtgacta
      841 cggcccaatc tttattgtca gtgatgggat ctttcggaac ttcgcgcagg taatgctcgg
      901 tgaccagatc gtcgagcgat tgcggcagtt ttcctttgtc cgccgcgtac tcatcgagca
      961 acgatcgcat cttgaaaagg tcgtcgcgca aaaccgtctc gcgcgcatgc atgatggttt
     1021 tttgatattg cgggagcgct atagacgcca gaataatgat gatcgaaata acgatcatca
     1081 gttcgagcag ggtaaacccg gcggcaatga gcagtgagcg gtgagcagtg agcagtccgc
     1141 gctgcttcac aataatcgcg actgactgct taccgcttac tgccttctgc ttactcttcc
     1201 taccagtcac tatacttctc tccattcaac gacgtccctt tcgatttcga gtggacgtcg
     1261 aacacgtttt caccccccca ggaggttgaa tccgcgggat cgtaacaaga gcgaaaatcc
     1321 cagtccgctt taccagtcat cggatcgacc ggaatccggc gcagataggt cttggtcttc
     1381 gggatcgttg actcctctgt cgcggcttca agcgcagtga cattcgcatt tcctcgccgg
     1441 cccagagagc cgctggtaat cggcaataca ctgacgccct taacgagcgt gtcgagatcc
     1501 ggtggatagc gatcgatgtt atccgcagtg aatatcgtct gatccgtgat gtatacacgc
     1561 actcgcggat cggcaaagac attcaggttc ggcgcagccg tatttggtct aacttgtccc
     1621 gagttagggt cggcctgttg ttgtggctgc tgttggttcg cctgcgcctg cgcgcccacc
     1681 agagcttccc ggtgaaactg atcgatcgcc tcgcgcatag tgcgtaaggc ttcacgcagt
     1741 tccgcctcct tctgtcgctt gaccgcaacc tgaacgaggg gaattgttcc gagagtcagg
     1801 atggccagca cggtgatcgt gatcaccagc tcgatcaacg agaagccgcg aaccccgtaa
     1861 ggcagtcggc agtcggctgt cggcagcaaa accgggacct gacgctttct gctttcttcc
     1921 gtgtgctttc tgctttctga cttgtagttc actacttcac cgttaactta accggctcgg
     1981 cctgaagcag aatgttacgg ccatcgctgg cgaccaggtg cacattcgcc aggtcaaaag
     2041 ctaataagct gtcaccgccc gccagggctt cgaattcaat gttgagcaaa actccctcgc
     2101 cacttaccgg cgaaccggca gcgggcgcta acgaaaccag gagcattccg ctctgatcca
     2161 tagactgtgt caaagccgga gcggttttcg cattcgcgaa gagagcgccc ggcgtaacgg
     2221 aattgatctt ggtcacgcgg ggatcgaaac gcagagtcag caccgcgagt cccaacggcg
     2281 ctccggtcct gacgcccaac gcgagttgac gcttttcgcc cactcgcatc tcgctttgcc
     2341 cgggagagag actcagccca acaacgcccg gcgccacggc attaggcttg gcgctgaaat
     2401 cggtcctctg gctcttgggc gaaagttctt cgacgaccgg gcttacgtta gcatcctgct
     2461 tggcgctggc ggcagttccc gacacgccag tggtcggcga tacgatactc ttgagcgcgc
     2521 tcgcgatgtc catcttctgc ggcggcggcg gctcaggttg agagttgctg gccacggctt
     2581 ttggctgagg catcgccgcc tccgtcgatc cagcaactcc gtctctcttt gccggaacaa
     2641 ccagggcagc ggtttgcgtc cgcggcggcg caacgttgtt gctctgagat accggcagca
     2701 cctgttctgc aacaacgtca ctcgtcgtgc tggtgttggc gttcggctga gcagcgacgg
     2761 ccgggttagc cgccggcaca taagccacct gcgcgtcggc t
//
LOCUS       DATILV010000356         2205 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_82552, whole genome shotgun sequence.
ACCESSION   DATILV010000356 DATILV010000000
VERSION     DATILV010000356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2205
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82552"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(222..2048)
                     /gene="typA"
                     /locus_tag="VLJ17_08040"
     CDS             complement(222..2048)
                     /gene="typA"
                     /locus_tag="VLJ17_08040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HSV22963.1"
                     /translation="MNLRNVAIIAHVDHGKTTLVDRLLQQSGSFRENQRVAERALDSN
                     DLERERGITILAKATSIVWKDTRINIVDTPGHADFGGEVERILNMVDGAIVLVDAAEG
                     PLPQTKFVVSKALKVGLRPIVAINKVDRQDARPTVVSGEVFDLFAALDATEDQLDFPV
                     LYGSAKEGWMAANVDGPKTSMAPLFDLILSHVAPPHLEEGPFRMLGTILEANPYLGRI
                     VTGRITAGSVRPNQTIKVIDRNGKFIEQGRVSKVLSFRGLERQAIEEGNAGDIVSIAG
                     LPQANVAHTLCAPDVSEPLPAQPIDPPTLSMMFRVNDSPLAGTEGDKVTGRMIRDRLL
                     REAEGNVALRVTESDEKDAMEVAGRGELQLGILIETMRREGYELSVSRPKVLIRFDPH
                     TGEMNEPIEEVVIDLDEEHSGVVVQKMSERKAELIEMRPSGGGRLRLVFYAPTRGLIG
                     YQGELLTDTRGTAIMNRLFHDYAPYKGAIQGRRNGVLISTDAGEAVAYALWNLEDRGP
                     MMVEPGWKVYRGMIVGEHTRGNDLEVNVLKGKKLTNIRTTAKDEAVRLTPPIQMTIEK
                     ALAYIQDDELVEVTPKSIRLRKRLLDPHERKRDERRKEAEEV"
BASE COUNT          433 a          664 c          641 g          467 t
ORIGIN      
        1 tagagccgac ctggccgctc ccattcaagt ccaacgttaa cattcggtta acggctcgat
       61 tatcgtgcga agtttggcaa aatcaactgc tgcggttggt tctgagtcca gcggggctcc
      121 aaacgtggcg gattcgcaac acctatcgtg cgcgttgcga tgtccaggtt cgggataggg
      181 gagatgagga gaggaacagg gtctgtgaac cccgaaatct gtcacacttc ttcggcttcc
      241 ttgcgccgtt catcccgttt acgctcgtgg ggatccagca atcgtttgcg caatcggatc
      301 gattttgggg tcacctcgac caattcatcg tcctggatat aggcgagcgc cttctcgatg
      361 gtcatttgga tcggcggcgt caggcgcacc gcctcgtcct tcgcggtggt gcggatattg
      421 gtgagcttct tgcctttcag cacattgact tcgagatcgt tgccgcgcgt atgttcgcct
      481 acgatcatac cgcgatagac cttccagcct ggttcgacca tcatcggccc gcggtcctcc
      541 aggttccaca gcgcataggc aaccgcttcg cccgcgtcgg tggaaatcag gacgccgtta
      601 cggcgtccct gaatcgcgcc tttgtagggc gcataatcat gaaacagccg attcatgatg
      661 gcggtgccgc gggtatcggt caaaagctcg ccctgatatc cgatcaggcc gcgagtcggc
      721 gcatagaaca cgagccgcag tcttccgccc ccggagggac gcatctcgat cagctcggcc
      781 ttgcgttcgg acatcttctg caccacgacg cccgaatgct cctcgtcgag atcgatcacg
      841 acctcctcga tgggttcatt catttcgcca gtatgcggat cgaaccgaat caggacctta
      901 gggcgcgaaa cgctaagctc ataaccttcg cggcgcatcg tttcgatcag gatcccaagc
      961 tgcaattcgc cgcgtcctgc gacctccatg gcgtcctttt cgtcggactc agtgacccgc
     1021 aaggccacat taccctcggc ttcgcgcaac aggcggtcgc gaatcatgcg gcccgtgacc
     1081 ttgtcgccct cggtgccggc cagcggagaa tcgttgaccc gaaacatcat tgacagggta
     1141 ggcggatcaa tcggctgagc cggcaacggt tccgacacgt ccggcgcaca taacgtgtga
     1201 gcgacattcg cttgcggtag tccggcgatg gaaacgatgt cgcctgcatt gccctcctca
     1261 attgcctggc gttccaatcc acgaaacgac aacacctttg atacccggcc ctgctcgatg
     1321 aattttccgt tacggtcgat gaccttgatg gtctgattgg gtctgacgga gccggcggta
     1381 atgcgcccgg tgacgatgcg cccaagataa ggattggcct ccaggatggt tccgagcatg
     1441 cggaatgggc cctcttctag atgtggcggg gccacgtgag agagaatgag atcaaacagc
     1501 ggtgccatcg aggtctttgg accgtcgaca tttgctgcca tccagccttc cttggcggaa
     1561 ccgtagagaa ccggaaaatc cagctggtcc tcggtagcgt cgagtgccgc gaaaaggtcg
     1621 aacacctccc cggatactac ggtcggtcgg gcgtcttggc ggtcaacctt gttgatggcg
     1681 acgatcggcc gaagcccgac cttcaaggcc ttcgacacca cgaacttggt ctgcggcaac
     1741 ggtccttcgg cggcgtcgac caacacgatc gcgccgtcca ccatgttcag gatgcgctca
     1801 acttcgccgc cgaaatccgc atgccccggc gtatctacga tattgatccg ggtgtctttc
     1861 cacacgatcg aggttgcctt ggcgagaatc gtgatgcccc gctcgcgctc caggtcattg
     1921 ctgtccaagg cgcgctccgc aacgcgctgg ttctcgcgga atgatccgga ttgctgcagc
     1981 agccggtcga ccagggtggt cttgccgtgg tcgacgtgcg cgatgatggc gacgttgcgc
     2041 aggttcatga atggggccgg aaaaccaatc gcgggccgca agggcccgca tttgccggca
     2101 atatagtgac gcagccaccg gacgcaatgc acaatcggcc ccgacggggg ctattgggat
     2161 ggaacccgtc ggtcataaaa aacgcgacaa ttacaataag gtagc
//
LOCUS       DATILV010000357         3366 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_594213, whole genome shotgun sequence.
ACCESSION   DATILV010000357 DATILV010000000
VERSION     DATILV010000357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3366)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3366)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3366
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_594213"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            192..521
                     /locus_tag="VLJ17_08045"
     CDS             192..521
                     /locus_tag="VLJ17_08045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22964.1"
                     /translation="MPAEIREFRKLEQSYLTLAENEEWMVDNREKINSPGADENWYGD
                     AIIAQQGKDTVGCHGADVATQSAAIPTKIQQLFDDAGSMGGLLQTATLRGQIARFLHK
                     HKVDDFR"
     gene            788..1165
                     /locus_tag="VLJ17_08050"
     CDS             788..1165
                     /locus_tag="VLJ17_08050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22965.1"
                     /translation="MQMPPMLEGESLKRLLQGAAAGAVATIFVGFYWGGWSLGSTTYK
                     IAKERSELAVIAALAPVCADKFRALPDAEAKQVALSKVDSWKRRDEFPKEFVTLPGES
                     YPSSALVDACYTLLLAPKSAALK"
     gene            1534..2607
                     /locus_tag="VLJ17_08055"
     CDS             1534..2607
                     /locus_tag="VLJ17_08055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013895323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HSV22966.1"
                     /translation="MKIAQIAPLYEAVPPSLYGGTERIVAHLTNALVELGHDVTLFAS
                     AEAHTRATLVPVRDQAIRLDPFPLKSDLAAHLSMLHELHLRRHEFDLLHFHVDLIHFP
                     FFEDFAARTVTTLHGRLDLKDLPEAYSRWRHYPLVSISDDQRKPLASANWLATVNHGL
                     AEGVYSFNKMPSDPYLAFLGRISPEKRPDRAISIAKRLGMRLKIAAKVDAVDVGYFRD
                     EIKPLLADPLIEFIGEIGDSEKSAFLGNANALLFPIDWPEPFGLVLIEAMACGTPVIA
                     WRCGSVSEIVENGKTGFIVDTEDEAVRAVLKLDQLDRRIVRKAFQERFTADVMARNYL
                     RLYWRLCGAAGRGPAPFRRIRTR"
     gene            2788..2985
                     /locus_tag="VLJ17_08060"
     CDS             2788..2985
                     /locus_tag="VLJ17_08060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22967.1"
                     /translation="MTVAESKCLKKGSGVYWRGDADDSGRITEISWDAVTIAWDIGQV
                     ATVHHGDMREIQRVPTRRATV"
     gene            3002..3151
                     /locus_tag="VLJ17_08065"
     CDS             3002..3151
                     /locus_tag="VLJ17_08065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22968.1"
                     /translation="MNDKRAGAPMPDMERREFIALIGGGVLLLAAKVRRARGQQPAMQ
                     PRVEA"
     gene            3158..>3366
                     /locus_tag="VLJ17_08070"
     CDS             3158..>3366
                     /locus_tag="VLJ17_08070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV22969.1"
                     /translation="MADLVAAMPGDRSLLIVEDDKSFLQRLARAMEGRGFTVTTAESV
                     ADGLTQLETTSPAFAVVDMRLEDGNG"
BASE COUNT          710 a          976 c         1010 g          670 t
ORIGIN      
        1 aatttaggcg cctaccctcg ctaaccgacc tcctcgtcgc ttcatcaccg acttacaatc
       61 agaaccaaaa gcgccggtga ctgagagacc ggtagagctc cctcctggcg ggaaagggct
      121 cgtctcatgt tcacagcaag caatatcgtg cgaaagcggc cgaatacaca gaactgctga
      181 aagcgactag tttgcctgcc gaaatccgcg aatttcggaa gcttgaacaa agctacctca
      241 cgctggccga aaatgaagaa tggatggtgg acaatcgcga aaaaataaac agtccgggtg
      301 cagacgaaaa ttggtatggc gacgccatca tcgcgcagca agggaaggat acggtcggat
      361 gccatggggc cgacgtcgca acgcagtcgg ctgcgatccc aacaaagatt cagcagctct
      421 tcgatgatgc cggttccatg ggcggcctat tgcaaacagc gacgctacgg ggacagatcg
      481 cccgcttcct acacaagcat aaggtcgacg actttcgctg aatcgcaccc ggcgcttctc
      541 acacgaaatg cgcttgaggc gcgatttcgg ttttcgatcg gtctccgcgg agttgccgcg
      601 cgcgacgtgc tcaaaaatca ctttcgaatg ttcaatttta tacagactcc tattgttaat
      661 gggtgcacgc ttcttgcgat cgagccgctg tcgcaaggcg accgggcttt caattcaact
      721 tacttaccgg aacccatccg ggtgtccgtg cgctcgctcc gaaacatgtc ggacgaaagg
      781 aaacaacatg caaatgcctc caatgctaga gggagaatcg ctgaagcgtc tgctgcaagg
      841 cgcagccgct ggtgccgtcg caacgatctt tgttggcttt tactggggtg gctggtcgct
      901 cggcagcacc acttacaaga ttgcaaaaga gcggtcagag ctggcggtca tagcggcgct
      961 ggcacccgtg tgcgccgaca aattccgcgc actgcctgac gccgaggcga agcaagtcgc
     1021 gctttcgaag gtcgactcgt ggaagcgccg ggacgaattc cccaaggagt tcgtgaccct
     1081 cccgggtgaa tcgtacccga gttccgctct tgtggacgcg tgctacacgc tgctgcttgc
     1141 accgaagtca gccgcgctca agtgagataa tcgccactga gcggcgattt tttgcatcgt
     1201 tcccttgtcc gcgcgccaag catgtcgggc ggaaggaaaa cacatgtcag ttcaacattg
     1261 gaggttcaaa gccgcgttcg gaggggagtg tcctcattgc ggcgaagtaa taacccttgc
     1321 tcttgtcgag cctcacccca gacacgcggg gttcgaggtt cacacgctaa gatgcgaaaa
     1381 atgcggtccc attaaatcca taatcgttgc gctgcgacct aacgaaaggc cgcccgaatt
     1441 ggccgcctag cgtgccgcgt gctgatcaac acgtgccgac gggggtaacc caatgggagt
     1501 aaggcagcct gcggattgga ttgatggcat cttatgaaga tcgcacagat cgcgccgctg
     1561 tatgaggcgg tgccgcccag cttgtatggc ggcaccgaac gcatcgtggc gcacctgacc
     1621 aacgctctcg tagagcttgg gcacgatgtc accctattcg cgagtgcgga ggcccataca
     1681 cgagcgacgc tggttccggt acgcgatcaa gccattcggc tcgatccgtt tccgctgaaa
     1741 tcagacctgg ccgctcacct gtccatgctg catgaacttc atttgcgccg gcacgaattc
     1801 gatcttctgc atttccatgt cgatctcatc cattttccgt tcttcgaaga ttttgcggcg
     1861 cgaaccgtga ccacgctgca cggtcggctc gacctgaagg acctgcctga ggcctattct
     1921 cgttggcgcc actatcccct ggtttccata tcggatgatc aacgcaaacc actcgcaagc
     1981 gcgaactggt tggccactgt taaccatggc ctcgctgaag gcgtttactc gttcaacaag
     2041 atgcccagcg atccttatct cgccttcctc ggtcgcatct cgcccgagaa gcgtcccgat
     2101 cgggcgatct ccatcgcgaa gcgcctgggc atgcgcctca agattgcagc aaaggtggat
     2161 gctgtggacg tgggctattt tcgggacgag ataaagccgc tattggccga tcctctgatt
     2221 gaattcatcg gggagatcgg tgacagcgaa aagtccgctt tccttggaaa tgccaacgct
     2281 ctcctgttcc cgatcgattg gcccgagccg tttggtctgg tgctgatcga agccatggct
     2341 tgtggaacgc ctgtgatcgc gtggcgctgc gggtccgtct ccgagatcgt cgagaacggg
     2401 aaaaccgggt tcattgtgga taccgaagac gaagctgtac gggcggtcct caagcttgat
     2461 caacttgacc gccggatagt gcgcaaggcg ttccaggagc ggttcaccgc ggacgtgatg
     2521 gcacgcaatt acctgcgcct ctattggcgg ctttgcggag cagccggcag aggtcccgct
     2581 ccctttcgac gcattcggac gcggtgagca gatgacagga cgccagcgct gtacacgaag
     2641 tgggactgac ccaccgcaag ggccgcagcg tcagggtccg gcgcctgatt cgcccggcgc
     2701 cggtggacgt cttgagagga caaaggggga cagcgataag ctgcttgtcg taatatgtac
     2761 gcggtgacag gcaatgggag gcgcaacatg acggtcgcgg aatctaagtg tctcaagaag
     2821 ggcagcggcg tttattggcg aggcgatgcc gatgatagcg gccgtatcac cgaaataagt
     2881 tgggacgcgg tcacgattgc ctgggacatt ggtcaggtgg ccaccgtaca ccatggcgac
     2941 atgcgcgaaa tccagcgagt gccgacacgc cgggctactg tgtaggggcg gccgcagcat
     3001 cgtgaacgac aagcgcgccg gcgcccccat gcccgacatg gagcggcgtg agttcattgc
     3061 cctaatcggg ggcggcgttc tgctgctcgc ggccaaggtg aggcgcgcgc gaggacagca
     3121 gccggcgatg cagccacgtg tggaggcgta aatggccatg gccgatttgg tcgccgcaat
     3181 gccgggcgac cgctcgctgc tgatcgtcga ggatgacaaa tcgttcctgc agcggctcgc
     3241 gcgcgccatg gagggccgcg gctttaccgt cacgaccgcc gaatcggtgg ccgacgggct
     3301 tacccagctc gaaaccacct cgcccgcctt tgccgtcgtg gacatgcggc tcgaggacgg
     3361 caacgg
//
LOCUS       DATILV010000358         4149 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2129556, whole genome shotgun sequence.
ACCESSION   DATILV010000358 DATILV010000000
VERSION     DATILV010000358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4149
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2129556"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..199)
                     /locus_tag="VLJ17_08075"
     CDS             complement(<1..199)
                     /locus_tag="VLJ17_08075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22970.1"
                     /translation="MTLSVKISICRRLLDVRAFRVVAICMCIAFVYIINRFVMFENVN
                     RSIGENFFAKMAHFTRAYPTDN"
     gene            755..1612
                     /locus_tag="VLJ17_08080"
     CDS             755..1612
                     /locus_tag="VLJ17_08080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22971.1"
                     /translation="MFTFRSMGLVAAVLCAAGGASTVEPIKKQVIPDFAPTDKTGWVL
                     DRKFGVDDLVPPPTGGPGPVTSDKAHPYVANGAGRQPTYRVADLSNPILQPWTIPSMK
                     KANDEVLAGKVPFRPRERCWPYGVPNFDVIALVEPYFIYQTSDKVVIISQGGPEIRHI
                     YLNVSHSKTVKPSWYGESVGHYEGGDTLVVDTIGISPKSFIDSYRTPHTDQLHVVERF
                     KLAADGMTVDISIFVEDPGAFTMSWSAVHRWRRVDTTPQLMASCSENNGDFFNLGLAP
                     VPEAAAPDF"
     gene            complement(2032..3018)
                     /locus_tag="VLJ17_08085"
     CDS             complement(2032..3018)
                     /locus_tag="VLJ17_08085"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV22972.1"
                     /translation="MVDQPTAEDRLIDRRSVLRTGAALAAAGPALLHGAHAKAQPRPR
                     GASPMTVIDAQVHAYAANTPQRPWHSVPNWPPHVTGDEMVAAMDKVGVDGAIYISPFS
                     MYQYDASYAVEVQKAHPDKFALVKPVNPDDPAVADVIADWKKTPGTVGIRIIMTKESK
                     RAPDDPGFDRILRAAVRNDFPVNILFWGNIDAGTAVIDRHPDVRFIIDHLGILQPSVP
                     PAPPQPWADLPKVLELAKRKNAVIKVTGACTLSREPYPFPDIWDPLARVFDAWGFDRC
                     LWGTDWTRAFAVVNYEQAVEPFLTADRLSDTERATLMGGACAKAYGWSPKKA"
     gene            3101..3223
                     /locus_tag="VLJ17_08090"
     CDS             3101..3223
                     /locus_tag="VLJ17_08090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22973.1"
                     /translation="MDLPVMQATRFELVISLKPRERSSLDVPPTLLAIADEVID"
     gene            complement(3682..3981)
                     /locus_tag="VLJ17_08095"
     CDS             complement(3682..3981)
                     /locus_tag="VLJ17_08095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22974.1"
                     /translation="MADSPQPASLNLMVSAVVRRGENIEVRVDAVNVSETTVTLHAPD
                     TVVISQPHVQFIGQGTFQRTVHWTVEHAQPGPLMWVEITVSAGTLTQIGQCKIIG"
BASE COUNT          817 a         1232 c         1230 g          870 t
ORIGIN      
        1 cattgtcagt tggatacgcg cgcgtaaaat gtgccatctt ggcaaaaaaa ttttcaccaa
       61 ttgacctatt aacattttcg aacatcacaa accgattaat aatataaaca aaagcaatac
      121 acatgcatat agcaaccaca cgaaaagctc ttacgtccag cagtcggcgg catattgata
      181 tttttaccga tagcgtcatg ctaatccccg aaagtgttat atggacggat cgctacgctt
      241 gccaagcccc acatcggtta tggtttcggt tggcgcacga atgacttttc tttctcgagc
      301 gccgccaggc gcgaacagct gctcgcgctc ggcactgatc tgcacccacg tagcgcacgg
      361 ggcagctgcg tcgcctacaa ctgtatgatc cgttttctcg atacccggcg cacggagttc
      421 cttcccggtt tgagcttggt gctgatacta catcatcccg acccttgagg cattggtgac
      481 tcggttcgag cctgccccgg ttgccgctaa ggtcccattg gccgggccgg tctgatggcg
      541 attgccgaaa agctcacggc tggatcatcg ggatacctcg cgtcgccagt gaggagtgca
      601 aggctcgcgg cgaacatctt tgtgataaaa attctaagcc gtgtcccatg cactcgtccg
      661 gccattataa acctccggga tttcgccgtc gttcaatccg cgctaggctt gctgcatgta
      721 cctcgaatcc aggcgatcac tcagggagct gacgatgttc acatttcgct cgatgggcct
      781 ggtggcagcc gtgctctgcg cggcgggcgg cgcgtcaacc gtggagccaa tcaagaagca
      841 ggtgatcccg gattttgccc cgacggacaa gaccggctgg gtgctcgacc gcaaatttgg
      901 cgtggacgat ctcgtcccgc cgcccacggg cgggcctggg ccggtcacct ccgacaaggc
      961 ccacccttat gttgctaacg gcgccggcag gcaaccaacc tatagggttg ccgatctttc
     1021 caatccgatc ctgcagccct ggaccatccc gtcgatgaag aaggcgaatg acgaagtcct
     1081 tgctgggaag gtgccgtttc gcccgcgtga acgctgctgg ccatatggcg tacccaattt
     1141 cgacgttatt gcgctggtcg agccgtactt catctaccag acttcagaca aggttgtgat
     1201 catcagccag ggcggcccgg agattcgcca tatctatctg aacgtgagcc attcgaagac
     1261 cgtcaaacct tcctggtatg gagaatcggt cgggcactac gagggtggcg atacgctcgt
     1321 cgtcgacacc atcggcattt cgcccaagtc cttcattgac agctatcgca cgccgcacac
     1381 cgaccagctc catgtggtgg agcgctttaa gctcgctgcc gatggcatga cagtggacat
     1441 ttcgatcttt gtcgaggatc cgggcgcctt tacgatgtca tggtcggcgg tgcatcgctg
     1501 gcgtcgagtc gacaccaccc cgcagctaat ggcctcatgc agcgagaaca acggcgattt
     1561 cttcaatctg gggctggcgc cggtgcccga ggccgccgcg ccggatttct gatcgccggg
     1621 ttcccaggga ataacttggg acaccggccg atagcgccca tgctgctggt tgcgatagct
     1681 aacatttcgg ggatgtcccg ctggcaactc tactgtgagg ctccaccagc gtcgcgaaga
     1741 cgcggaaggg ggccgcgatc acgtccttgc agtgccttag tgcgtgagcg gcccgaggct
     1801 gccgactttg ggagaggaat aaagctcgca gccatctggg gtacaccgcc agtgatgcaa
     1861 acgcggtcgg taaaccggcc gtgatgcaaa catagccgcg acttcggccc gtgacccgtc
     1921 caccgacaaa aattcggcgc cagaggcgac tgaaattcag cggtgcagca ggctgtttgg
     1981 tcgcgctgtc ttttgggcgc tcacaaggag gggaccgacc acgagttggc actaagcttt
     2041 ctttggcgac cagccataag ccttggcgca ggcgccgccc atcaatgtgg cccgttcagt
     2101 gtcactcagg cggtctgccg tcaggaaggg ctcgacggcc tgctcgtagt tgacaacagc
     2161 gaacgcgcgc gtccagtcgg tgccccacag gcagcggtcg aaaccccagg cgtcgaacac
     2221 gcgagcgagg ggatcccaga tgtccgggaa cgggtacggc tcccgggaca gcgtgcaggc
     2281 gccggtcacc ttaatcactg cgtttttgcg cttagcgagt tccagcacct tggggaggtc
     2341 ggcccagggt tgcggcggcg cgggtggcac gctcggctgc aggattccga gatgatcgat
     2401 gatgaagcgc acgtcggggt ggcggtcgat caccgcggtt cccgcgtcaa tattgcccca
     2461 gaacaggatg ttgaccggga aatcgtttct gacagctgcg cgcaggatgc ggtcgaagcc
     2521 ggggtcgtcc ggcgcgcgct ttgattcctt ggtcatgatg atgcggatgc cgaccgtgcc
     2581 cggcgtcttt ttccagtcgg cgatgacatc ggccaccgcc ggatcgtcgg ggttgaccgg
     2641 cttaaccagc gcgaacttgt caggatgggc cttttgcacc tccaccgcat agctggcgtc
     2701 gtactggtac attgaaaagg gggaaatata gatcgcgccg tcgacgccca ccttgtccat
     2761 cgccgccacc atctcgtcac cggtgacgtg aggaggccag ttgggcacgc tgtgccaggg
     2821 tcgctgcggc gtgttcgcgg cgtaggcgtg gacctgggca tcgatgaccg tcatcggcga
     2881 cgctcctctg ggtcggggct gcgctttggc atgcgctccg tgtagcagcg ccggcccggc
     2941 cgcagcaagc gccgccccgg tccgcaggac gctgcgccgg tcgataagcc tgtcttcggc
     3001 agtcggttgg tcgaccattt ctccctccat ggcgcattgg agccacgctt tgaggtcata
     3061 tcatgctcta tgctgcacgc ctcctcaagg gcgcgaagcc atggacctgc cggttatgca
     3121 ggccaccagg ttcgagctgg tgatcagcct taaaccacgc gagcgctcca gcctcgatgt
     3181 gccgccgacg ctcctcgcga tcgccgacga ggtgatcgat taggcgacag cgccggattg
     3241 gtccgaagaa ggaccttttg gatcgcttga agctttgcac catgaagaaa agatttcgcc
     3301 tatcacagcc gtctccagaa cggccgcttc gttgcaacag aaatcgcgtc ccgtcttgga
     3361 aacttcgcat ctgcgctcct ttggacacat ggactgctgt ggggtgatgg cacccaagag
     3421 cccgatgccg ggcccgattg ggttcactgc ggacattggc gtgcaaagct cggtgcaacg
     3481 gtccgctctt cgagcttccc gggtaattgt tcgatagggc agagcgagta gagttggcag
     3541 agggaatcga gtgaacgatt tacaccggat cggacgccgt catcctcgcg ccgccaactg
     3601 aaatcgcgag ccgtcggacg ttgccgtttc aggcgcgccg caggcttgag tgcagcgttg
     3661 ggtcgggccg acaagttatc gtcagccaat gattttgcac tggccgattt gcgtaagcgt
     3721 tccagcggac acggttattt ccacccacat caatggtcct ggctgcgcat gctcgacggt
     3781 ccaatggacc gttcgttgaa aagtaccttg tccgataaat tgaacatgcg gttgtgagat
     3841 caccacggta tcaggagcat gtagcgtgac agtcgtctcc gaaacattga ccgcgtcaac
     3901 acgaacttcg atgttctcgc ctcgccgcac aaccgccgag accatcaaat tcaggcttgc
     3961 aggctgcgga ctatcagcca ccgatcagcc gacttttcgc gcgttcctca aggaagaacg
     4021 ttttatgctt tccgacgagg tttcgctgaa caacccgaac tcgcttttca cgatcggaga
     4081 ccacatgacc aattcgttgg gcgtgacggc catgccgttt gaggatcgac agggtcaagt
     4141 ctaccgacg
//
LOCUS       DATILV010000359         4011 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2895365, whole genome shotgun sequence.
ACCESSION   DATILV010000359 DATILV010000000
VERSION     DATILV010000359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4011
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2895365"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            167..421
                     /locus_tag="VLJ17_08100"
     CDS             167..421
                     /locus_tag="VLJ17_08100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22975.1"
                     /translation="MVAIAEWEKGGVGCYTSSLFSFFRGIIRQPPQDFCELLGHRHFV
                     IRGDKPLACCVGEIYFFPRGTVVRDAADYPGATYFTYTSL"
     gene            469..1944
                     /locus_tag="VLJ17_08105"
     CDS             469..1944
                     /locus_tag="VLJ17_08105"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HSV22976.1"
                     /translation="MKAGLLGTLLLALATTLAAPQSQLDELIARAKSLELDTPHVPPP
                     GEPLTHHAAGYAKVMCSAVFITGLEPDFAAENVGFFTAPYEIRAILGKPVIDRANQAV
                     HVTLPNGAIRTAKYLGSQGCVTLPFGESGVHFTPVAVKSQLPDAATEPWPMGDVLTKE
                     ALPAEIDATKLKAAVEAAFEPPEALTAAFVVTWKGHLIAERYASSAKMRTPLEGWSMG
                     KSITATLFGILLNKGVYELTQPAPIPEWQTSGDPRAKIRIEDLLHMSSGLRIRAPQDP
                     DYDPSGPYPDHLYLYTGGVDSYHYAATRTQQWPPNTVGRYRNTDPVLISYLIRLAVEK
                     RGEEYLSFPQRALFDKIGIRTMRIETDSFGNFLGQGYELGCGRDWARLGNLYLQDGIW
                     NGERILPAGYAKFVSTPAPAWVADKRPIYGAFFWINGADQYPVPRQSYYMAGAGGQTT
                     MIVPSHDLVVVRMGHYKGETPGDAALRKALMLLMEAVPRHN"
     gene            complement(2709..3146)
                     /locus_tag="VLJ17_08110"
     CDS             complement(2709..3146)
                     /locus_tag="VLJ17_08110"
                     /EC_number="1.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007067119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004146 - dihydrofolate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HSV22977.1"
                     /translation="MNRREFTDVRAVIAIGLSGQFGLRGRLPWEGNRGREYVADVERF
                     FELTRGHVLIMGHRTFTSLPDFAFKDRDIVEIHGSDTPEDVLARFPSRVVFIGGGPPV
                     YAAYAPFIRHWDINRLPYDGEADRWFDPAWLVAGGHQVIAKLS"
BASE COUNT          897 a         1104 c         1164 g          846 t
ORIGIN      
        1 ttcctggttt ggttgcgggc gaccagccaa tcgcctttac atcggcgaca gcgaatcgcc
       61 tttgcgcaaa gcatactcct gattcgcggc gttcgcggcc gccgccgcga tcacattttt
      121 agcggtgtgt cgtgggaaag agcggcacca gggcgcggcg cgcttagtgg tcgcgattgc
      181 ggaatgggag aaaggcggcg taggttgcta tacgtcttcg ctattctcat tctttcgcgg
      241 catcatccgc cagccaccgc aggatttctg cgaattgctc gggcaccggc atttcgtgat
      301 ccgtggcgat aagccgctgg cgtgttgcgt tggtgagatc tactttttcc cgcgcggaac
      361 ggtagtgcgc gacgctgcgg attaccctgg tgctacttac tttacctaca cgtcgctata
      421 gcgaccgcgg tgttccgtcc tgagattcaa aaaattaggg agggaggggt gaaagcgggt
      481 ttactgggta cgcttcttct agccctcgca accacactcg cggcgccgca atcgcagctc
      541 gatgagctca ttgcacgggc aaaatcgctt gaacttgata cgccccatgt accgccacct
      601 ggtgaaccat taacacatca tgcagccggc tatgccaagg ttatgtgctc ggccgttttc
      661 ataaccggtc tcgaaccgga ttttgctgct gagaatgtcg gatttttcac tgcgccttat
      721 gagatccgag caatcctcgg taagcccgtc attgaccgtg ccaaccaagc ggtccacgtc
      781 acgcttccga acggggcaat acggacagcc aaatatctcg gaagccaggg atgtgtgacg
      841 ctgccgtttg gtgagagcgg tgtccatttc acgccggtgg ccgtgaaaag ccaattgccc
      901 gacgcggcca ccgagccttg gccgatgggc gatgtcctga cgaaggaggc actgccggcc
      961 gagattgacg cgaccaaact caaagcggcg gtggaggcgg ctttcgagcc gcccgaggcc
     1021 ctgactgcgg ccttcgtcgt cacttggaaa ggccatctca tcgccgagcg ctatgcctcc
     1081 agcgccaaga tgcgcacacc tctggaaggc tggtccatgg ggaagagcat taccgcaacg
     1141 ctgttcggca tcctgctcaa caaaggcgta tatgaactaa ctcagcctgc cccgatcccc
     1201 gaatggcaaa catccggcga cccccgcgcc aaaatccgca tagaagatct actccacatg
     1261 tccagtggac tacggatcag agcgcctcaa gatcccgact atgatccgtc cggtccttat
     1321 ccggatcatc tctatcttta cacaggagga gttgattcat accactacgc ggccacacgt
     1381 acgcagcaat ggccgcccaa tacagttggc cgttaccgca acaccgatcc agtgttgatc
     1441 agctacctga tccggctcgc ggttgaaaaa cgcggtgaag aatatctgtc ttttccacag
     1501 cgggcgctgt tcgacaagat cggcattcgc accatgcgga ttgaaacgga ctcgttcgga
     1561 aattttctcg gacagggcta cgagctaggc tgcggccgcg actgggcgcg gctcggcaat
     1621 ctttatctcc aggatggtat ctggaacggc gaacgcattc tgcccgcggg ctacgcgaaa
     1681 ttcgtcagca caccagcacc ggcttgggtg gcagacaagc gcccaatcta tggagccttt
     1741 ttttggatta atggtgctga ccagtatccg gtcccacgac agtcgtatta catggcgggt
     1801 gcaggcggcc aaactacgat gattgtaccg tcccatgatc ttgttgtggt gcgtatgggt
     1861 cactacaagg gtgaaacacc cggagacgca gctttacgaa aagcgcttat gctgttgatg
     1921 gaagccgtgc caaggcacaa ctgaaaagca gcgcacaaac gagacgcatg ccatttctgc
     1981 gcaacaattt ggaacggcgg ggcaaggtag agagatcggc ttgcccgtgc gcggttatac
     2041 gcgacgtgcg gctgacgggt tgtgcgaatg agtggacgga cgcggtatta gcgcgacgca
     2101 tgggcttatt gcgatactgg ccagcgcaga attgatcggt tcggcttaca ggcaattcga
     2161 gcaaggctaa tgcgctggca tagtatattg attgcaggct attgattgcg cgtgcgcacg
     2221 cgcgcaatgc ggggtgctaa tcggggtcag ccattgtgtg ccgtttgtca cagggcgcag
     2281 acctcgtggg gtttagtttc gtgggtacca agccccaatt tttgtcgttg tctcggttac
     2341 cgtcaacgag caacggaggc gcacgtctgg cgaatgaaaa acggaaaggc aatcgagttc
     2401 ggcgaatatc aaggcgacga gcaacggtaa agatcggttc tggtcctgca gcttggcccg
     2461 catcgtcgtc ccgaacctct caggcaaaca tgcgcgagcg cctgtcatcg gaggcaaaag
     2521 ccgccaccca ttaaagagcc cccacaaatc aatgagcgct gccgcacctc cagagcaaac
     2581 gatacgagcc gctggcccgg ccgccatgag tcggctccct gctgctttgc ccatgctaac
     2641 gggttcagct gacgcctcat tcgatcacct cgtcggcgag tgataacaac ttttggacac
     2701 cggggcgatc aagaaagctt ggcaataacc tggtggccgc ccgcgaccaa ccaggcagga
     2761 tcgaaccagc ggtcggcctc gccgtcataa ggcagccggt tgatgtccca atgccggatg
     2821 aaaggcgcat aggcggcata gacgggcggg ccgccgccga tgaaaacgac tcggctcgga
     2881 aagcgcgcca gcacatcctc tggcgtatcg gaaccgtgaa tttcgacgat gtcgcggtcc
     2941 ttaaaggcaa agtctggcag tgaggtgaag gtgcggtggc ccatgatgag tacgtggccg
     3001 cgcgtcagct cgaagaaacg ctcgacatcg gcgacatatt cgcggccgcg attgccttcc
     3061 caaggcagac ggccgcggag cccgaattgg ccgctgaggc cgatggcgat gacggcgcga
     3121 acgtccgtga attcccgtcg gttcatggca tctctcgaga caaggtcgtc cccgcagaga
     3181 ctaaggaagt tgagctcggt agaacaaata acgtctggca gcttacagac tagtatccgc
     3241 tcgcaaaggc aaaagttgcc tccgctttag gcgctggctt accgagacac tgatcttgca
     3301 aaacggatat tattttattc ggaaaggctc agtaaataag cttccggcac ttaaccattg
     3361 cttggccaga taaagtgcgc cgctcgctgg ctgaaacttg aaatcccgcg cctgaccttg
     3421 cgagttggag gaccggaaat tggagtatgg aacgcttgga ttactgtgaa aaccgggctg
     3481 taaaaaaatc gccagaagcg tcacgcgttg agtttcattt tattctgaca gttgttttgt
     3541 cgcgaaagta ttgagtctat agtgaatatg tggatcggtt aaacgccatc aggctcttgc
     3601 aggcattggt cgccgcagga gcgaattcag atactccaat ggctaacgcc tggattagca
     3661 aggtagcttt ggaaatcgga ttaaagggcg aagagtttca ttctgccctt gtctatgcgg
     3721 gtgggcagga ttggctcgac aatgaccaga aagagggttg gacttcgctc acccgtgcgg
     3781 gtgaggcgct tgcaagagct taggccctct cacggcgcta acaactaatt attggctgat
     3841 ccagcgaagc ggacagccaa ctgatcacgc ggaacggcaa actcgaagcg ctgataactt
     3901 gagtttgtgc tcacgcgcgc tcgtcagcag ttccttccag caaactggaa aggcattcct
     3961 tctagatacc gttctggtca tgggcgagca ggcccgcgcc ataacgcata c
//
LOCUS       DATILV010000360         3552 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4684353, whole genome shotgun sequence.
ACCESSION   DATILV010000360 DATILV010000000
VERSION     DATILV010000360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3552
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4684353"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..212
                     /locus_tag="VLJ17_08115"
     CDS             <1..212
                     /locus_tag="VLJ17_08115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003599942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="two-component system response regulator"
                     /protein_id="HSV22978.1"
                     /translation="SGLEVTKWIKDDPELHRIPVVAVTAFAMKGDEERIRQGGCEAYL
                     SKPISVAKFMETVRRFLGAPEGERR"
     gene            209..1579
                     /locus_tag="VLJ17_08120"
     CDS             209..1579
                     /locus_tag="VLJ17_08120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018321124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PleD family two-component system response
                     regulator"
                     /protein_id="HSV22979.1"
                     /translation="MTARILVVDDVPANVRLLEARLSAEYFEVATASSGAEALAACAR
                     AECDLLLLDVMMPDMDGFEVCRRIKKNPATQHIPVVMVTALDQPSDRVTGLGAGADDF
                     LTKPVSDLVLIARVRSLTRLKVMTDELRMRALTSREIGLENPALEATADSGRGAHLLI
                     VDDCPSSYDRMAQMLCEEHTVDVETDPRRAVFQVAETAYDLAIISLDLENYDGLRLCS
                     HIRSLERTRSLPLLAVTEDNDDSRLTRGLEIGVNDYLFRPVDRQELLARVRTQVKKRR
                     YTEKLRDNVQLSIEAAITDALTGLHNRRYMESHLGTLVDQAALRGKPICILVLDIDYF
                     KAINDSHGHAAGDEVLKEFSRRLKKEVRGIDLACRYGGEEFVVVMPDTDIGVATMVAE
                     RLRRRIASEPFPINRTSRIQATISVGIAAMHSGEDKAADILKRADQALYRAKRDGRNR
                     VVADAA"
     gene            complement(2100..2267)
                     /gene="rpmG"
                     /locus_tag="VLJ17_08125"
     CDS             complement(2100..2267)
                     /gene="rpmG"
                     /locus_tag="VLJ17_08125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011179398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HSV22980.1"
                     /translation="MAKSTMIKIKLLSSADTGYFYVTKKNSRTQTEKMVKKKYDPVAK
                     KHVEFRETKIK"
     gene            complement(2426..3292)
                     /locus_tag="VLJ17_08130"
     CDS             complement(2426..3292)
                     /locus_tag="VLJ17_08130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HSV22981.1"
                     /translation="MRPVGAVKFAHPRKAEDGKERDLQMTTDPHARLAEFLSIGDSKQ
                     NLPGVKIRDAATMLVIDRTGPTPKVLLGRRHHGHKFMPGKYVFPGGRVERADRRASAA
                     TPLDKRVEARLMKEVRYPSPEKSRGFPLAAIREVFEETGLVLGTKVDSGSFPTRAGEQ
                     RTGKGPAHPPDDEWAKFARTGVAPDLAAVHFVARAITPPGRPRRFDTRFFAVDANAIA
                     ARVEGVVGLDTELVELVWLPIEESLKLDMPGITMAVLEELKIRTAEGFAHDLPVPFYR
                     MRHGTRLRELLD"
     gene            complement(3339..>3552)
                     /locus_tag="VLJ17_08135"
     CDS             complement(3339..>3552)
                     /locus_tag="VLJ17_08135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF983 domain-containing protein"
                     /protein_id="HSV22982.1"
                     /translation="VVPLALVVEVTYAPPYWLHALLWLPLTIGLAIGLLQPIKGAIVS
                     WQWANYMHGFDPNASDTETNADPASR"
BASE COUNT          678 a         1049 c         1094 g          731 t
ORIGIN      
        1 tttcagggct cgaggtcaca aagtggatca aggacgaccc ggaattgcac cggattccgg
       61 tcgttgccgt caccgcattc gctatgaagg gtgacgagga gcgcatccgg cagggtggct
      121 gcgaggccta cctgtcgaaa ccaatttcgg tggccaaatt catggaaaca gttcgccgct
      181 tcctgggtgc tccggaggga gaacgccgat gaccgcccgc attctcgtcg tcgacgacgt
      241 ccccgccaat gtcaggcttc tcgaggcccg attgtcggcg gagtatttcg aggtcgcgac
      301 ggcgtccagc ggcgccgagg ccctcgcggc atgcgcgcgt gccgaatgcg acctcctttt
      361 actcgacgtg atgatgcccg acatggacgg cttcgaggtg tgccgccgca tcaagaagaa
      421 ccccgccacc cagcacatcc cggtggtgat ggtgacggcc cttgatcaac catcggatcg
      481 cgttactggt cttggcgccg gcgccgacga ttttctcacc aagccggtat cggatctggt
      541 gctgatcgcc cgggtgcgat cgttgacccg gctgaaagtg atgaccgacg agttgcgcat
      601 gcgcgctctc acgtcgcgag agattgggct cgaaaacccg gccctggaag cgactgcgga
      661 cagcggccgc ggtgcccatt tgctcatcgt ggatgactgt ccgtcctcct atgaccgcat
      721 ggcgcaaatg ctgtgcgaag aacacaccgt cgacgtcgag acggatcccc gtcgggccgt
      781 gttccaggta gccgaaacgg cttacgacct tgcaatcatc tcgctcgatc ttgagaatta
      841 cgatgggttg cggctgtgca gccatattcg ttcacttgaa cgcacccgca gtctgccact
      901 gcttgccgtc accgaggaca acgacgatag ccggctgacg cgaggtctgg aaattggcgt
      961 caacgactat ctatttcgtc cggtcgatag gcaggagcta ctggcccgcg tacgcaccca
     1021 ggtaaagaag cggcgctaca ccgaaaaact gcgtgataat gtgcaactgt cgatcgaggc
     1081 ggcgatcacc gatgcgctaa ccggtctgca taatcgtcgc tatatggaga gtcatctcgg
     1141 cacgctggtc gaccaagcgg ctttgcgcgg caaaccgatc tgtatcctgg tgctcgacat
     1201 cgactacttt aaggcgatca acgatagcca tggccatgcc gccggcgacg aagtgctcaa
     1261 ggagttttcc cggcggctga agaaagaggt gcgcggcatc gaccttgcct gccgctacgg
     1321 cggtgaggag ttcgtcgtgg tgatgcccga caccgatatc ggggttgcca cgatggtggc
     1381 ggaacgatta cgtcgtcgca tcgcatcgga gccgtttccg attaaccgga catcgcgcat
     1441 tcaggcgacc atttcggtcg gcatagcggc gatgcactcc ggtgaggaca aggctgccga
     1501 tattctcaaa cgcgctgatc aggcgctcta ccgtgccaaa cgcgacggcc gtaatcgcgt
     1561 ggtggccgac gccgcgtgag acgcgcgcaa ttcgttaaaa ttcatcctaa aaattcatgg
     1621 ttgatgggaa tataatgccg gatcaaggcc ttaaccattg agttccgagc cgcatccgat
     1681 agatttaccg tcagcagtgg ccaacgacgc gataccacgg aattggcaaa cttttcatcg
     1741 gccactgcat cgggaaaccc tgcgggttgc tcaggtccgc cgcatctcct gtgtccgtgg
     1801 ggttcggccg gtcggggcgg tgggagtggc ctcctcaaag acaccgtttc cgaccggcca
     1861 ccactttagg gggcaattat taacagctcg tagcccggat gatgaagggc cggctttctt
     1921 tttaacgggg cgtacacagg cgggcggggg gtaccctgat tgcggccggc ctctttgccg
     1981 gctcgcaatc aggggccagt ccgcttgtcc cggggccgcg gaaaatccat ttcaggcttt
     2041 gaagaggtgg gagaggccgg tcccagatgg agagccggcg gctttccatt cgggctgcgt
     2101 tacttgatct tagtttcgcg gaattccacg tgcttcttgg cgaccggatc gtatttcttt
     2161 ttcaccattt tctcggtctg ggtgcgggaa ttttttttgg tgacatagaa atagcccgta
     2221 tcggcgcttg agaggagctt gatcttgatc atggtcgact tggccatggc ggcaattcct
     2281 cggttgagtt ggggcttcca atgtaaggcc ggtacacctt aacccgctct tcgatgcgcg
     2341 ggttaaggcc ccctgatacc cgatacattg attgatctac tagcggctgg tggtgaaaag
     2401 tcaagaaata gcgggctcat tgggctcagt ccagaagctc gcgcagccgc gtgccgtgcc
     2461 gcatgcgata gaacggcacc ggaaggtcgt gggcaaagcc ctcggcagtc ctgattttga
     2521 gctcttcgag caccgccatg gtgatgcctg gcatatcgag cttcaaactt tcctcgatcg
     2581 gcagccacac cagttccacg agttctgtgt cgaggccgac cacgccctcg acccgcgccg
     2641 cgatggcatt ggcatcgact gcgaaaaaac gcgtgtcgaa acggcgcggt cgtcccggcg
     2701 gcgtgatggc tcgggcgacg aagtgcaccg cggcgagatc gggtgccacg cccgttcgag
     2761 cgaatttcgc ccattcgtca tcggggggat gcgccggacc ttttcccgtc cgctgctcgc
     2821 cggcgcgggt ggggaacgag cccgaatcca ctttggttcc gagaacaagg ccggtttcct
     2881 cgaagacctc gcgaatggcg gcgagcggga atccgcgcga tttttctggg ctcggatagc
     2941 gcacctcctt catcaaccgc gcctcgacgc gcttgtcgag tggtgtcgcc gcactcgcgc
     3001 gccgatcggc acgctcaacc cgtccgcccg ggaacacata ttttcccggc atgaacttgt
     3061 ggccgtgatg gcgacgcccg agcagcacct tgggcgtagg cccggtgcga tcgatcacca
     3121 gcatggtggc ggcgtcacgg atcttcacgc ccggaaggtt ctgcttgctg tctccgatgg
     3181 acaggaattc ggcaaggcgg gcatgcggat cggtggtcat ttgcaaatct ctttcttttc
     3241 cgtcctccgc tttgcgggga tgggcgaact tgacggcacc gactggccgc aagagcccct
     3301 tcccaatcct gccacgcaag cgggggatgg gggctagatc accgcgaagc cgggtcggcg
     3361 ttcgtctccg tgtccgatgc attcggatcg aagccgtgca tgtagtttgc ccattgccag
     3421 ctgacgatcg cacccttgat gggctgcaac aggccgattg caagcccaat cgtcaaaggc
     3481 agccatagca gggcatggag ccaatagggc ggcgcatacg taacctcaac cacgagcgcg
     3541 agcggcacca cc
//
LOCUS       DATILV010000361         6356 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_83143, whole genome shotgun sequence.
ACCESSION   DATILV010000361 DATILV010000000
VERSION     DATILV010000361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6356)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6356)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6356
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83143"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..430)
                     /locus_tag="VLJ17_08140"
     CDS             complement(<1..430)
                     /locus_tag="VLJ17_08140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="arylsulfatase"
                     /protein_id="HSV22983.1"
                     /translation="MLEFEAAHLGGYDQTDLFTGKGPSRCHEVFYSAESTLGAVRIDL
                     KYRFIDQPNGWFGSTVKPGWSILVNLRLDPYERAGLNASINYYNWYAYEFWRFVFVKD
                     EVAKAAQTFLAFPPMQRGASFNLEALKQGLEKKQAARARIR"
     gene            complement(507..731)
                     /locus_tag="VLJ17_08145"
     CDS             complement(507..731)
                     /locus_tag="VLJ17_08145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22984.1"
                     /translation="MQRAACIGKVPAVIVVIMMLCHFAMFVCVLMMVVRYAGGRKLQS
                     TRAGRRHDARKLGDQEQTDQQAHEPGYRPQ"
     gene            1202..2644
                     /locus_tag="VLJ17_08150"
     CDS             1202..2644
                     /locus_tag="VLJ17_08150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008967254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HSV22985.1"
                     /translation="MTAAPQTHAGRASIVASAFVAMSLAGCTSFSPDAGMDVVSQITG
                     AALAQDAHRVDTEDAAEVARNRVRRLLASPLSADAAVQVALLNNRGLQAAYNELGIAE
                     AVRVQANLPPSPTFSLSRISTSVEFDIERQIIADILALATLPARADIAADRFRQAQLN
                     TADETLGIGLGARRIYYRAVASRQLVAFLEQASSAAETSAKLATELGRTGAMNRLDQA
                     REQSFYAELSAQLATARQQAASDRESIIRSLGLWGSDLGFKLPQTLPVLPQRPKSLPM
                     IEVEAVRRRVDLQIARIEVDALAKSYGLTSATRFINLLHVAGISRTQREPGGAHGTGG
                     GVDLEFQVPIFDFGEARLRQAVEVYTAAVNRLTEKAVNVRSEARDAYRVYRSSYDIAA
                     HYRDQVLPLRQIITDETVLRYGAMQIDVFALLTEARQRVAVNIAAIEAQRDFWLASVN
                     LTAAVTGGSTMANVSATPRLATRSSATASE"
     gene            2660..4036
                     /locus_tag="VLJ17_08155"
     CDS             2660..4036
                     /locus_tag="VLJ17_08155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012631102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper oxidase"
                     /protein_id="HSV22986.1"
                     /translation="MLSRRNLLGAGAVLVGASAISGRVQAASIPEAPSTATNTMQPPL
                     FPSAGPDYQPIVTLNGWTLPWRMNGDWKEFHLVAEPVTREFAPGMKAYLWGYNGQSPG
                     PTIEAVEGDKVRIFVTNRLPEHTTVHWHGMLVPNGMDGVGGLTQPHIDPGKTFVYEFV
                     LKQSGSFMYHPHSDEMVQMAMGMMGMFVVHPRDPKLYRVDRDFVFVMSSYLIDPGTYL
                     PKVAEMTDFNMWTWNARVFPGIDPLPVRLGDRVRVRIGNLTMTNHPIHLHGHSFAVTC
                     TDGGWIPESARWPATTTDIPVGAIRAFEVVADAHGDWAFHCHKSHHTMNAMGHNTRNF
                     IGVNKKELARARQIIPDFHPMGTGGMADMGSMEMPMPDNTLPMMTGFGQFGPIEMGGM
                     FTVFKVREDLAANDYSDPGPYKNPEGTVAYEIKLAAGQPVPRSGSPSTHPRTANETIP
                     RVTSKSRR"
     gene            4049..4345
                     /locus_tag="VLJ17_08160"
     CDS             4049..4345
                     /locus_tag="VLJ17_08160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008145143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-binding protein"
                     /protein_id="HSV22987.1"
                     /translation="MKAIPHLVLALALSIGSQSAVAQADLIEGQVMKVDQSAGKITIK
                     HGPDKKLGMEKGMTMVYKAQDPAMLTAVKAGNKIKFDAEQVNGQYTVTKIEKAK"
     gene            4412..4747
                     /locus_tag="VLJ17_08165"
     CDS             4412..4747
                     /locus_tag="VLJ17_08165"
                     /inference="COORDINATES: protein motif:HMM:NF016149.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper resistance protein CopC"
                     /protein_id="HSV22988.1"
                     /translation="MPAVTTAFAHAHLVRSTPAEDGTVKAAPSEVTLKFNERLEPSFS
                     SAISRSSPCLLAFCATVQAAKDGPADLCSRAVSLAGGNWMFRPAQKGRAKIHDLHAGT
                     FTDGQGHLC"
     gene            complement(4922..5335)
                     /locus_tag="VLJ17_08170"
     CDS             complement(4922..5335)
                     /locus_tag="VLJ17_08170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22989.1"
                     /translation="MTGDKSRVRADENIEAARAVAGRVSKLVLMDVAQSWLRLATQID
                     GGNGGRLERRRRDQMQIKIKTPASPGRKTLPALQVEAVATNGWLVIKSTDGRTFLLAG
                     DIVRFNADTIEFTDGDGKHVALAYQQIASVGIGHD"
     gene            complement(5587..5760)
                     /locus_tag="VLJ17_08175"
     CDS             complement(5587..5760)
                     /locus_tag="VLJ17_08175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22990.1"
                     /translation="MADAQSMLAHANYYINTLAPGDFDDYEAEFRDTLREALTRDGVG
                     FHAQHTDQQHRGG"
     gene            6121..>6356
                     /locus_tag="VLJ17_08180"
     CDS             6121..>6356
                     /locus_tag="VLJ17_08180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ice-binding family protein"
                     /protein_id="HSV22991.1"
                     /translation="MGRPRGAVAALGLMGAALTSPSHAQAPPLGTAASFGVLAGSTVT
                     NTGPTVISGNVGVSPGIAGTGFPPGTVVNGTIHAA"
BASE COUNT         1229 a         1963 c         1930 g         1234 t
ORIGIN      
        1 ttctgatgcg cgcacgagcc gcctgcttct tttcgagccc ctgcttcagg gcttcgagat
       61 tgaagctcgc ccctctctgc atgggcggga aggcgagaaa cgtttgcgct gcctttgcta
      121 cctcgtcttt gacaaagacg aagcgccaaa actcgtaggc gtaccaattg tagtaattga
      181 tcgatgcgtt caagcccgca cgttcatagg gatcgagacg caaattgacg aggatagacc
      241 aacccggctt gacggtgctg ccgaaccaac cgttgggctg atcgataaat cggtatttga
      301 ggtcgatacg caccgcgccg agggtcgatt cggcggagta gaaaacctcg tgacacctcg
      361 agggcccctt gccagtgaag agatccgtct gatcatagcc accgagatgg gccgcttcaa
      421 actccaacat ggcaatgcgt tgacgttcgg cccggatgct tccataatta tccggtccac
      481 cgcgttcgcc gaggctgtat ttgaaatcat tgcggacgat accctggttc gtgcgcttgc
      541 tggtcggtct gttcctggtc gcccagtttg cgggcgtcgt gtcgtcgccc tgcgcgagtg
      601 ctctgcaact tgcgaccgcc ggcgtatcgc acgaccatca tcagcacgca cacgaacatg
      661 gcgaagtggc acagcatcat gatcaccacg atcacggcgg gaaccttgcc gatacatgct
      721 gcgcgttgca cgcgtatttt tcgggcattc tccctcccgc gatcggggtc gagaccggca
      781 gcatcatggc ggaatctctt tcagtgagtc cggacacgtt ggccctcggt gtcccgcccg
      841 gtaggctcga ccgtccccca agacctcagc gctgatctga gtcgtagtgt gtctgcgatt
      901 gcgcaagcac gcttctccga ttcgtgcatg agggttagga cgtaatgctc agacattgct
      961 ggtgtggagc tctgttccga atcggaacgg ggcttgggct cgcgtttggg aatgccgcgt
     1021 gcatcgcaac gccgcctccg gcgtcttcgg ttgcggccgc ggatccgtcg gtgcatgttc
     1081 cgccgacacg gtaccgttcg gttacacctg ccggcaccct tgtgccggct gagccgcagc
     1141 cctgggagga cctcaatcgg aacgtcgctc cgcctgcggc gtccccgaat gggcgcgagc
     1201 catgacggcc gcgccgcaaa ctcacgctgg acgtgccagt atcgtggcgt cagcgttcgt
     1261 ggcgatgtcg ctcgccgggt gcacgtcatt ctctcccgac gcgggcatgg acgtggtgag
     1321 ccagattaca ggcgccgcgc tcgcgcagga tgcgcacaga gttgacacgg aggacgcggc
     1381 cgaagtcgca cgcaaccgcg tgcggcggct gcttgcatct ccgctgtcgg ccgacgcagc
     1441 ggttcaagtg gcgctgctca acaacagagg attgcaggcg gcctacaatg agctcggaat
     1501 cgcggaggcc gttcgggtcc aagcgaacct gccgcccagc ccaacatttt cactaagtcg
     1561 gatttcaact tcggtcgaat tcgacatcga acgccagatc atcgccgaca tcttggcgtt
     1621 ggcaacgctg cccgcgcggg cggatatcgc cgccgaccgt ttccgccaag cacaactcaa
     1681 taccgccgac gaaacgctcg ggatcggcct tggagcgcgc cggatctact atcgtgccgt
     1741 cgcatcgcgc cagttggtgg cgttcttgga gcaagcaagc tccgcggcag agacctcggc
     1801 caaactcgcg acagagctcg gacggaccgg cgccatgaac aggcttgatc aggcgcggga
     1861 gcaatcattc tacgccgagc tctcagccca acttgcgacg gcgcggcagc aggcggcaag
     1921 cgatcgtgag tccataatcc gctccctcgg attatggggc agcgatcttg gtttcaagct
     1981 gccgcagact ctgccggttt tgcctcagcg gccgaagagc ctgccaatga tcgaggtaga
     2041 ggcggtccgc cgtcgtgtcg atctccagat cgcccgcatt gaggttgatg ccctcgccaa
     2101 gtcctatggg ctgaccagtg caacacgctt catcaatctg ctgcatgtcg cgggcatctc
     2161 ccgaacgcag cgcgaaccgg gcggcgccca cggcaccggg ggcggggtcg acctcgagtt
     2221 ccaggtgccg atctttgatt tcggcgaggc acggttgcgc caagccgtcg aggtttacac
     2281 ggcagcggtg aaccgcctca ccgaaaaggc cgtgaacgtg cggtcggagg cccgcgacgc
     2341 ctatcgagtc tatcgatcga gctacgatat cgccgcacac tatcgcgacc aggtcttgcc
     2401 cctgcgccag atcatcacgg acgagacggt gctgcgctac ggcgcgatgc aaatcgatgt
     2461 cttcgcgttg ctgaccgaag cccggcagcg ggtcgccgtg aacatcgctg caatcgaggc
     2521 gcaacgcgat ttctggctgg caagcgtcaa cctcacggcc gccgtcacgg gtggcagcac
     2581 catggccaat gtgagtgcga cgccgcgcct cgcaaccaga tcaagcgcaa ccgcaagtga
     2641 gtgaaccaag gagataggca tgttgtcgcg acgaaacctg ttgggagcgg gcgccgtcct
     2701 ggtaggcgcg agcgcgatca gcggccgtgt gcaggccgcg agcattccgg aggcgccgag
     2761 cacagccacc aatacgatgc agccgccgct gtttccgtcg gccggcccgg actaccagcc
     2821 catcgtgacg ttgaatggct ggacgcttcc ttggcggatg aacggtgact ggaaggaatt
     2881 ccatttggtc gcggagcccg ttacccgcga gtttgccccc ggcatgaagg cgtatctgtg
     2941 gggctacaac ggtcaatcgc cggggccgac catcgaggcg gtggagggcg acaaggtccg
     3001 catcttcgtc accaacagac tacccgagca cacgaccgtg cactggcacg gcatgttggt
     3061 gccgaacggc atggatggcg tcggcgggct cacccaaccg cacatcgacc cgggcaagac
     3121 cttcgtctac gagttcgtgc tcaagcagag cggcagcttc atgtaccacc cgcattccga
     3181 cgagatggtg cagatggcga tgggcatgat ggggatgttc gttgtccatc cgcgcgaccc
     3241 gaagctctac cgggtcgacc gtgacttcgt gttcgtcatg agctcatacc tgatcgaccc
     3301 tggcacgtac ttgccgaagg tcgccgagat gaccgacttc aacatgtgga cctggaatgc
     3361 tcgggtattt ccgggcatcg atccgctgcc ggtgcgcctc ggcgaccgcg tgcgcgtacg
     3421 catcggcaat ctcaccatga ccaaccatcc gatccatctg catggtcaca gctttgcggt
     3481 gacctgtacg gatggcggct ggattcccga gagcgcccgc tggccggcaa cgaccacgga
     3541 tattccggtc ggtgccatcc gcgccttcga ggtggtcgcc gacgctcatg gcgactgggc
     3601 attccattgc cacaagtcgc atcacacgat gaacgccatg ggtcacaaca cccgaaattt
     3661 cataggcgtg aacaaaaagg aactcgccag ggctcggcag atcatcccgg acttccaccc
     3721 aatgggcaca ggcggcatgg ccgatatggg gtcgatggaa atgccgatgc ccgacaacac
     3781 gctgccgatg atgaccggct tcggtcagtt cgggccgatt gaaatgggcg gaatgttcac
     3841 tgtgttcaaa gttcgcgaag acctcgctgc gaacgactac agcgatccag gtccgtacaa
     3901 gaatcccgag gggaccgtcg cgtacgagat caagctcgcg gccgggcaac ccgtccctcg
     3961 gtccgggagc ccctcgaccc accccaggac ggcaaatgaa acgatcccaa gagtgacttc
     4021 caaatcacgc cgctgacagg agagcaacat gaaggcaata ccacacctcg ttcttgccct
     4081 cgcgctttcc atcggatcgc aaagcgctgt cgcccaggct gacctgatcg aagggcaagt
     4141 catgaaggtc gatcaatccg ccggcaagat caccatcaag catggccctg acaagaagct
     4201 cggaatggag aagggcatga ccatggtcta caaggcacag gatcccgcga tgctcacggc
     4261 cgtcaaagcg ggcaacaaaa tcaagttcga cgccgagcag gtgaacggcc agtacacggt
     4321 gacgaagatt gagaaggcaa aatgaacgcg ccgcgacgat aatcgtcacc gtcacatcgt
     4381 atgtcctttc aagctcggga gtgcgctgtc gttgccggca gtcacgaccg ctttcgcgca
     4441 cgcccatctc gtccgctcaa ctcccgcgga ggatggcacc gtgaaagccg cgcccagcga
     4501 ggtcacgctc aagttcaatg agcggctgga gccgtcgttc agctcggcca tttcgcgttc
     4561 aagcccttgt ctgctcgcct tttgcgctac cgtccaagct gcaaaagacg ggcctgccga
     4621 tctttgctca cgcgcggtca gtttggcggg cggcaactgg atgttccgtc cggctcaaaa
     4681 aggacgagcc aaaattcacg acctccacgc tggaaccttt acagatgggc agggtcatct
     4741 ttgttaaaga ccaggcttcg ctccagcaac tcgtcgtgta cgacccgcat caaaaagtgt
     4801 ggtgatgtgc cgaagcctgg ttcacggctt tcaaggcttt gggaggtgaa gaaccggtcg
     4861 cgttgtcacg tcggagttga cctggatcaa tggactcgcc cgttcatagc acgtggtcgg
     4921 ctcaatcgtg cccgatcccg acgctcgcaa tttgttgata ggccaatgcc acgtgcttac
     4981 catcaccgtc ggtgaactcg attgtgtccg cgttgaaccg aacgatatcg ccggccagca
     5041 ggaacgtccg cccgtccgtg ctcttgatca cgagccagcc gttcgtggcg acggcctcaa
     5101 cctggagggc ggggagcgtt ttccggccgg gagatgcagg ggtcttgatc ttgatctgca
     5161 tttggtcccg tctgcgtcgc tccaagcgac cgccgttgcc gccatctatc tgagtggcaa
     5221 gccgcagcca actctgagcc acatccatca ggacaagctt gctcactcgg ccggccaccg
     5281 cgcgtgccgc ctcgatgttc tcgtccgccc gcactcggga cttatcgcca gtcatttgac
     5341 acccggtttc atggtggcga ccatcgcgca tggggacccc gggcctgtgg gggggtgggt
     5401 tgggtgggcc cgggatccgg cctcgcggct ggttcatgct ccgtaaggcc atatcaatcg
     5461 aacgcggtcc tgcggccggc tgtctgtaca aaattgctca caatcgagat ttcttaacgg
     5521 ggaacctgga cgtctgattt cggcgttgtc cgacccaggt gtccggtctc ggtctcgttc
     5581 atgctttcag cccccgcgat gctgctgatc tgtgtgttgc gcgtgaaacc ccacgccatc
     5641 ccgcgtcagc gcctcgcgga gcgtgtcccg gaactcggct tcataatcgt cgaaatctcc
     5701 cggcgcgagc gtgttgatgt agtaatttgc gtgggccaac atggattgtg catcggccaa
     5761 tgatggcagg gctcatgcga caaccgaagc cgctggcgac aacttcagta tggcgttcgt
     5821 tggcacgaga gagcctatgt tcggccgctt ctgccgccta gcgaaacagt tgtcgccaca
     5881 ttgaagccta gttaatgccg aagtcatttt atgcaccgtt gccgaggcgc gacagcgtta
     5941 tttggcgctc ccagataaag ttgagtcgcc atactggttt ggtaggggga gccaatgaag
     6001 aagatctgtc cattaaggcg gcattctcta tgcactgagt gggaccgtgc cgaagccggc
     6061 aacagtcatg cgagcgggtt ttcgttcgac cctaggtgcg tgcggacatt accggcaaag
     6121 ttgggcagac cccggggcgc tgtggcggcg ctcggcctga tgggagcagc cctgacttct
     6181 cccagccatg ctcaggcgcc tcccctggga acggcggcga gcttcggggt cctggccggc
     6241 tcaacggtca ccaacactgg cccaaccgtg atcagtggaa atgtcggcgt ctcgccgggc
     6301 atcgcgggca ccggttttcc tcccggaact gtggtgaacg gcacgataca tgcggc
//
LOCUS       DATILV010000362         3546 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1106489, whole genome shotgun sequence.
ACCESSION   DATILV010000362 DATILV010000000
VERSION     DATILV010000362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3546
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1106489"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..422
                     /locus_tag="VLJ17_08185"
     CDS             <1..422
                     /locus_tag="VLJ17_08185"
                     /inference="COORDINATES: protein motif:HMM:NF044723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22992.1"
                     /translation="RMLHRLHHELKLPVYCLLDNDPWGYYIYSVIKQGSINLAYESRR
                     MAIPEARFLGLRSEDYTRCQLKPSVQIRLNEQDIKRAGQIAQYPWFSHKKPWQKEIEL
                     MLHNGFKLEVEALISKDISYVTEEYVPARLKEANFLD"
     gene            complement(500..2221)
                     /locus_tag="VLJ17_08190"
     CDS             complement(500..2221)
                     /locus_tag="VLJ17_08190"
                     /inference="COORDINATES: protein motif:HMM:NF033559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HSV22993.1"
                     /translation="MHVATTHRQYKGKTYQTHLLRRTYREGNKVKHQTLGNLSHLPGP
                     IIELVRRALAGETFMAPEAAFEIVRSRPHGHVAAVLGMWRRLKLDALIDERPSRQRDL
                     VAAMIVQRILEPRSKLATARALNEETLHSSLGEMLEVAAADEDELYEAMDWLQPRQER
                     IERALAKQHLSEGTLILYDLTSVYFEGRHCPLAKLGHSRDEKSGKLQMVVGLLTNREG
                     CPIAVEVFAGNTGDPKTVAGQITKIRERFGIQRVVLVGDRGVLTSARIREDLKPTEGI
                     DWITALRAPSIQQLVESGCLQMGLFDEKDLAEISDPAYPNERLIACKNPILAEERARK
                     REDLLQATEKELAQVAAATQRTKRPLRGASAIGLRVGRLLGHFKVGKHFQIEIKDNGF
                     HYQRDQKRIDEESALDGIYVIRTSVLADTLSSSDTIRCYKRLSTVERAFRSVKTVDLK
                     IRPVHHRLEKRVRAHVLLCMLAYYLEWHIRRLLAPLLFDDEQPTPKHSPVAPAERSTA
                     ALEKVHSKRTTDQLPVQSFQSLLADMATIVKNRVQPRHAAAAAFDLITTPTPLQQRAL
                     ELLNVRL"
     gene            complement(2377..2718)
                     /locus_tag="VLJ17_08195"
     CDS             complement(2377..2718)
                     /locus_tag="VLJ17_08195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22994.1"
                     /translation="MLIVVVGAGAYIYTKQAAPVGSSASSVIDTIGIQKDLMAMANAE
                     RRYFVEHAKYASLDELRRDGDTHIPTRPHYIYSSEASETSFKISATYSGPDPKAPKHI
                     SVDETMSVKID"
BASE COUNT          764 a          985 c          979 g          818 t
ORIGIN      
        1 gccggatgct tcaccgcctg caccacgaac tgaagctccc cgtatattgt ctgctcgaca
       61 acgatccctg gggatactac atctacagtg tcatcaagca aggatccatc aatctcgcct
      121 acgaatcacg ccgcatggca attcccgaag cccgttttct gggcttgcgc agcgaggatt
      181 acacgcgatg ccagctcaag ccgagcgtac aaatccggtt gaatgaacag gacatcaaac
      241 gggcgggcca gatcgcgcag tatccgtggt tctcccataa aaagccgtgg cagaaggaaa
      301 tcgaattgat gctccacaac ggcttcaagc tcgaggttga agcactcatc agcaaggaca
      361 tcagctacgt tacggaagag tatgtgccgg cacggctgaa ggaggctaat tttctggatt
      421 agaccgaagt tcctccgcgc cgtaggcgca agtacaagat tttcaagggg agccgactgc
      481 gaggccgaca cgttactggc tacaaacgta cattcagtaa ttcaagggcg cgctgctgca
      541 atggagtggg agtggtgatg aggtcaaagg cagcggccgc agcatggcgc ggttggacac
      601 ggttcttgac gatggtcgcc atgtccgcaa gcagagactg aaagctctgc acggggagtt
      661 gatcggttgt acgtttggaa tgcacttttt ctagagccgc ggttgaacgc tcggcgggag
      721 cgacagggga atgcttgggt gtgggttgct catcgtcgaa cagcagcggt gccagaagtc
      781 gtcggatgtg ccattccagg taataggcca acatgcagag cagcacatga gcacgaacgc
      841 gtttctccaa tcgatgatga acggggcgta tcttcagatc gacggtcttc acactccgga
      901 aagcgcgttc gacggtcgac agccgtttgt aacagcgtat ggtatccgag ctcgacaacg
      961 tatccgcaag cacgctggtg cgaatgacgt aaataccgtc gagcgccgac tcctcatcaa
     1021 tgcgtttttg gtcgcgctgg tagtggaagc cattgtcttt aatttcgatt tgaaaatgct
     1081 tgcccacctt aaagtggccc aacaggcgac ccacacgcag accaatcgcg gaggcgccac
     1141 gcagtggtcg tttggttcgc tgagttgccg cagccacttg tgccaactct ttttcggtgg
     1201 cttggagcaa gtcttcgcgt ttgcgtgcgc gttcttcagc caggatggga ttcttgcaag
     1261 cgatcaagcg ctcgttcgga taggcaggat cggagatctc ggccaggtcc ttttcgtcaa
     1321 acaatcccat ttgcaagcaa cccgactcga ccagctgttg aatcgaaggc gcgcgtaacg
     1381 cggtaatcca atcgatgcct tcagtgggtt tcagatcctc acggatgcgc gcgctggtga
     1441 gtacgccgcg atcgcccacc aacacgacgc gctggatacc gaaccgttca cgaattttgg
     1501 tgatttgccc tgccacggtt ttggggtcgc ccgtgttgcc cgcgaacacc tcaacggcga
     1561 tggggcatcc ttcacgattc gttaacaagc cgactaccat ttgcagtttt ccactcttct
     1621 cgtcccgcga gtgtcccaac tttgccaacg ggcagtgtcg gccctcgaaa taaaccgacg
     1681 tcaaatcgta gaggatcaat gtcccttccg ataggtgctg tttggccaat gctcgctcaa
     1741 tgcgttcctg acgcggctga agccaatcca tggcttcata caactcgtct tcatcggctg
     1801 cggcgacctc caacatctct cccaaactac tgtgcaaggt ctcctcattc agagctcgcg
     1861 ccgtcgccag tttcgatcgt ggctccagaa tcctctgcac gatcatcgct gccactagat
     1921 cgcgttgccg gctcggccgc tcatcaatca gtgcatccag tttcaagcga cgccacatgc
     1981 ccaaaaccgc ggcgacatgt ccatgtggac gcgaacgcac aatctcgaag gcggcctctg
     2041 gagccatgaa cgtctcaccg gccagcgcgc ggcggaccag ttcgataatc ggtcccggca
     2101 ggtgcgatag attacccaac gtctgatgct tcaccttatt gccttcacgg taggtgcggc
     2161 gtaacaggtg cgtctggtag gtcttgcctt tgtactggcg gtgtgtggtg gctacatgca
     2221 tcgaaccatt tcgcgttggc atgctcgaat aatgccacga tatttgcgaa tgtcaacact
     2281 tattgtcgat atttagtggc tacattgaac agcgaaaacc accgcatcta tctgatccga
     2341 cgagcttact tatctaaaac tcagaggaac ttcgggctag tcgattttca ccgacatggt
     2401 ctcatcaacg ctgatatgtt taggcgcctt ggggtccggg ccggaatatg tcgcgctaat
     2461 cttgaagctg gtctcgctgg cttcgctgga gtagatatag tgtgggcgtg ttgggatgtg
     2521 ggtgtcgccg tccctgcgca gttcatccaa cgaagcgtac ttcgcgtgct ccacaaagta
     2581 gcgacgttcg gcattggcca tagccatcag atccttctgt ataccgattg tgtcgatcac
     2641 ggatgaagcc gagctgccga caggcgccgc ttgcttcgtg tagatatagg ccccggctcc
     2701 gaccacgact atcagcataa cgaatccaaa acttcgtccc attcaccaca ggttagccgg
     2761 gggacatggg gagtcaacct cttttgaagt gaatcgacag gttgcgccgg gcaccgggag
     2821 cggcttggcc acaataacgc agtgtgtgat gaccatatca acgccacacc ggtgcgccgt
     2881 gtcagtcaag agtgcgccgc acaaccggca catccggaat ggttgagttg caattgccgt
     2941 cacccatatg actgtagtca tgcgcttagg ctgtcgccct cgtcgtccct gtgcaacaca
     3001 agggctgtga atcttttgag gcattcgagg cagccacaca tatgcgcttg ctcggcgtcc
     3061 gccaagacca gatcgcagtt gttaacaact tgctttatcc gctctacgga gatgtgcgca
     3121 ttctgcggat ctgccatgcc aactgccaga aggccctgtg ccgaggcgca gaccttcagc
     3181 ctccctcttg gcttgttgca aatcacttgc caggagaact gggcgaacgg caacttcttg
     3241 gtgtagctgt atagaaattt ctcactgaag ccgcgaatcg gcgcgatttg ctgaacatcc
     3301 aggaggcgat cctgtgacga ggaggctgtg ggcttggctt tgggccgcgg ctggaggagt
     3361 ttggtgacta gcttaatgtc ggctgcgctt cggcctcgtc ctcaaaggcc gtctcgcggc
     3421 ctcctgcggg atcgtgcatt gcctgtcttt gaacttggga agcttcaatc acgcagaatt
     3481 gtgtaggctt aatcatgagc acttctgcaa ttcaggatct ctaccctgac gatttggcgc
     3541 actgtt
//
LOCUS       DATILV010000363         4594 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2896637, whole genome shotgun sequence.
ACCESSION   DATILV010000363 DATILV010000000
VERSION     DATILV010000363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4594)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4594)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4594
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2896637"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2072)
                     /locus_tag="VLJ17_08200"
     CDS             complement(<1..2072)
                     /locus_tag="VLJ17_08200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HSV22995.1"
                     /translation="MAGLANARPPPPRPRRRGVAGVIAALALLACGGAFTCAPVSAQD
                     FTFPPRPGPAPKSKIAIERDKSGQKQMLVQAREIDYDYVNHRVSAVGNVQIYYGNSTI
                     EADKVIYDQTAKRLHAEGNVRLTEDDGKVTYGDIMDLSDDYRDGFVDSLRLEAPDQTR
                     MAAARADRSSGNFTVFHNGVYTACLPCKDDPKKPPLWQVKAARIIHDQGEKMMYFENA
                     QLEFFGKPVAWMPYFSAPDPTVKRKTGVLVPWISSSTVYGKAVEIPYYWALAPDYDAT
                     FSPMITTKQGPLLQGEFRQRLINGAYMIRGAGIYQLNKNSFANDLGIDAPGNRDFRGS
                     LESSGQFALNDKWVWGWDGVVLTDKTFLQDYNPRLSAYHFTDPFGAAASSGISQLYLT
                     GKGNRSYFDIRSIYYLGFSPADIQSQIPVIHPVLDYNYTFDRPILGGELGYNVNFTSL
                     TRNQANFDAITQTAQNANSCSNTADPLFATSANCLLRGVPGTYSRFTAEAHWRRSITD
                     QYGQVFTPFMAVRADAGSMQIANDPGVANFINTGDSNLVRAMPTIGLEYRYPFISAHS
                     WGTQTLEPIGQIIARPNEPQVGKWPNEDAQSFTFDDSNLFRVDKFSGYDRIEGGGRAN
                     YGVQYTAQFNQGGAVNALFGQSYSLFGQNSFAQMTPTNTGLATGLDTTRSDYVARASY
                     QPNAQYKFT"
     gene            complement(2072..3169)
                     /gene="lptG"
                     /locus_tag="VLJ17_08205"
     CDS             complement(2072..3169)
                     /gene="lptG"
                     /locus_tag="VLJ17_08205"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007609350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HSV22996.1"
                     /translation="MSMIGGTLARYFGMHFLGAVLMVFAGIFVLVAMLDYIEMMRKVA
                     ELPNIPLVLVVKTSFYRVPQVAEQFMAFCILIGAMVCYLNLSRRLELVIARSAGMSVW
                     QFISPALAVAFVLGILATTIYNPVSATLQERSKRYEAELFGQSTRVLRGGGGPFWTSQ
                     RSSEGQAIINAKSSREQGVNLNGVTVFAFDDAGKFTQRIEARAATLEPGVWQMMDARV
                     YKLGTLPADYPVYQFKTNLTPEQVRESFATPETVPFWELPTYITIAEHAGLAAAGYRL
                     QFQKLLARPFLLVAMVFLAAAVSLRFFRFGGVQKMILSGVAAGFLLYVLQKVTEDLSK
                     AELMHPMAAAWLPVLAGGLTGFVALLYQEDG"
     gene            complement(3177..4337)
                     /gene="lptF"
                     /locus_tag="VLJ17_08210"
     CDS             complement(3177..4337)
                     /gene="lptF"
                     /locus_tag="VLJ17_08210"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HSV22997.1"
                     /translation="MGSISRYIFRTTFSAFLIVLVSLTALIWVTQALRDFDLMTNQGQ
                     TILVFVGITGLIIPLLVLVIAPIALLLAVVHVLNKLSTDSEIIVMNAAGISPWFLFRA
                     FMSVAIVVSLLVAAISAYFAPKGLRMLRDWLTEVRANVVSTIVQPGRFSTIENGVTIH
                     IRERNTNGQLLGIFLDDRRNPAEHITVLSEDGELIDNDTGTFLILHKGVVQRQQPTQR
                     DPAMVVFDRYAFDLSQFAGGAQAVKYSIRERYLWQLIFPDPKDQFYIEQPAQFRAEMH
                     DRLMGPIYPLAFVVIAFAYLGAPRTNRQSRTLSVLGAVGGVLLLRIIGFASTVVGASF
                     PWVLSAQYVAMAIAFGGGVYVIRRGLILEPPAFIANWLTALTKRMSQRFATQ"
BASE COUNT          964 a         1336 c         1439 g          855 t
ORIGIN      
        1 gtaaatttat attgggcgtt gggctggtag gacgcgcgcg ccacatagtc ggagcgggtg
       61 gtatcgagtc cggtagcaag gccggtattg gtgggggtca tctgcgcgaa tgaattctgc
      121 ccgaacaggc tgtaggactg gccgaacagc gcattgacgg cgccgccttg attgaactgg
      181 gcggtgtatt gcaccccgta attggcgcgt ccgccgccct cgatccgatc gtagcccgag
      241 aatttatcga cgcggaacag attgctgtcg tcgaaggtga aactttgtgc gtcctcgttc
      301 ggccacttgc caacctgcgg ttcattgggt cgcgcgataa tttgcccgat cggttccaag
      361 gtctgcgtgc cccaggagtg cgcgctgatg aacggatagc ggtactccaa gccgatagtc
      421 ggcatggcgc gcaccagatt gctgtcgcca gtgttgataa agttggccac gcctggatcg
      481 ttggcgattt gcatggagcc ggcgtcggcg cgtaccgcca tgaacggcgt gaacacctgg
      541 ccgtattggt cggtgatgct gcgccgccag tgggcttcgg cggtgaagcg actgtaggtg
      601 ccgggaacgc cgcgcagcag gcagtttgcg gacgtggcga acagcgggtc ggcggtgttc
      661 gaacaggagt tggcgttttg tgcggtctgg gtgatggcgt cgaaattggc ctggttgcgc
      721 gtcaggctgg tgaagttgac gttgtaacca agctcgccgc caaggatcgg acggtcgaag
      781 gtgtagttgt aatccaacac cggatggatg accgggatct ggctctgaat atccgccggc
      841 gagaagccga gatagtagat cgagcggatg tcgaaatagc tgcggttgcc cttaccggta
      901 agatagagct gcgagatgcc cgagctggca gcggccccga acggatcggt gaagtgatag
      961 gccgacagac gcgggttgta gtcctgcaag aacgtcttat cggtcagcac caccccgtcc
     1021 cagccccaca cccatttgtc gttgagcgcg aactggcccg agctttccag gctgccgcgg
     1081 aagtcgcgat tgccgggcgc atcgataccg agatcgttcg cgaagctgtt cttgttgagc
     1141 tggtagatgc ctgcgccacg aatcatgtag gcgccgttga tcaggcgttg gcgaaattcg
     1201 ccctgcagca gcggaccctg cttggtggtg atcatcggcg agaaggtggc gtcgtaatcg
     1261 ggcgccagcg cccagtagta ggggatctca accgcttttc cgtaaaccgt gctcgacgat
     1321 atccacggca ccaacacgcc ggtcttgcgc ttgacggtcg gatcgggcgc cgaaaaatac
     1381 ggcatccagg ctaccggttt gccgaaaaat tcgagctggg cattctcgaa atacatcatc
     1441 ttctcgccct ggtcgtggat gatgcgcgcg gctttcacct gccacagcgg cggtttcttc
     1501 gggtcgtcct tgcagggcaa gcaggcggtg tagacgccgt tatggaagac ggtgaaattt
     1561 ccgctgctgc ggtcggcgcg cgcggccgcc atgcgcgtct gatcgggggc ctcgagacgt
     1621 agcgagtcga cgaacccgtc gcgataatcg tccgacaggt ccatgatgtc gccgtaggtg
     1681 accttgccgt catcctcggt cagccggaca ttgccttcgg catgcaggcg cttggcagtc
     1741 tggtcgtaga ttactttgtc ggcttcaatc gtagagttgc catagtaaat ctgaacgttg
     1801 ccgacggcgg agacgcgatg attgacgtag tcgtagtcaa tctcgcgcgc ctgcacgagc
     1861 atttgcttct gcccggactt gtcgcgctcg atggcgatct tggatttcgg cgccggtccc
     1921 ggacgcggcg gaaacgtgaa atcctgcgcc gaaaccggcg cgcatgtgaa ggcgccgcca
     1981 caagccagca aggccagggc ggctataact cctgcgacgc cacggcggcg aggccggggc
     2041 ggtggtggac gagcgttagc cagtcccgcc atcacccgtc ctcctggtac agcaatgcaa
     2101 cgaaccccgt tagacccccg gcaagcacgg gcagccaagc cgctgccata gggtgcatca
     2161 gctcagcttt gctcaaatcc tcagttactt tctgcaagac gtagagcaga aagcctgctg
     2221 ccacaccact taaaatcatc ttttgcaccc cgccaaagcg gaagaagcgt aaactgacgg
     2281 cggcagcaag aaaaaccatg gcgaccagca aaaatggccg cgccagaagc ttctggaact
     2341 gcaatctata gcctgcggca gccaggcctg cgtgttccgc gatcgtgata tacgttggaa
     2401 gttcccaaaa cggcacagtt tcgggcgtcg caaagctttc gcgaacctgt tccggcgtga
     2461 gattggtctt gaactggtag actggatagt cggccggcaa agtgccgagc ttgtagacgc
     2521 gcgcatccat catctgccag acgccgggtt ccagcgtggc cgcgcgcgcc tcgatgcgct
     2581 gcgtgaattt gccggcatca tcgaaggcga acacagtcac gccgttgaga ttgacgccct
     2641 gctcgcggct ggatttggcg ttgatgatgg cctggccttc gctgctgcgc tggctggtcc
     2701 agaacgggcc gccgccgccg cgcagcacgc gcgtgctttg tccgaacaac tcggcctcgt
     2761 aacgcttcga acgctcctgc agggtcgcgg aaactggatt gtagattgtg gtggccaaga
     2821 tgccgagcac gaaggccact gccagcgccg gcgagatgaa ttgccagacc gacatgccgg
     2881 ccgaacgggc gatcaccaat tccagccgcc gcgataaatt gagatagcag accatcgcac
     2941 cgatcaggat gcagaaggcc atgaactgct cagccacctg tggcacgcgg tagaacgagg
     3001 tttttaccac cagcacgagc gggatattgg ggagctcggc caccttccgc atcatttcga
     3061 tgtaatcgag catggcaacc agcacgaaaa tgccggcgaa caccatcagc accgccccca
     3121 ggaagtgcat gccgaaataa cgcgccagtg ttccgccgat catcgacatc atcaactcat
     3181 tgtgtggcga agcgctggga catgcgcttg gtgagcgcgg tgagccaatt ggcgatgaag
     3241 gccggcggct ccaggatcag gccgcggcgg atcacgtaca ctccgccgcc gaatgcgatc
     3301 gccatcgcca cgtattgcgc cgacagcacc cacggaaagc tggcccccac cacggtcgag
     3361 gcaaatccga taatacgcag cagcaacacc ccgccgacgg cgccgagcac cgacagcgtg
     3421 cggctttgcc ggttggtgcg cggcgcgccg agataggcaa aggcgatcac aacgaaagcg
     3481 agcggataga tcggccccat gagccggtcg tgcatctcgg cgcggaactg ggcgggctgc
     3541 tcgatgtaga actgatcctt cggatcgggg aatatcaact gccacagata gcgctcgcgg
     3601 atcgaatatt tcaccgcctg cgcgccgccg gcgaattgcg agagatcaaa ggcatagcgg
     3661 tcgaacacca ccatggccgg atcgcgctgg gtgggctgtt ggcgctgcac gacaccctta
     3721 tgcaggatca ggaaagtgcc ggtgtcgttg tcgataagct cgccgtcctc cgacagcacc
     3781 gtgatgtgct cggccggatt gcggcggtcg tcgagaaaga tgccgagcaa ctgcccgttg
     3841 gtatttcgct cgcgaatatg gatggtgacg ccgttttcga tcgtggagaa acggcccggc
     3901 tgcacgatgg tgctcaccac attggcccgc acctcggtga gccagtcgcg caacatgcgc
     3961 aggcccttgg gcgcgaaata ggcgctgatc gccgccacta acagcgacac cacgatcgct
     4021 accgacatga aggcgcggaa caggaaccag ggcgatatgc cggccgcgtt catcacgatg
     4081 atttcggaat cggtcgatag cttgttgagc acatgcacga ccgcaagcag caacgcgatc
     4141 ggcgcgatca ccaggacgag cagcggaatg atcaggccgg tgatgccgac gaagaccaga
     4201 atggtctgac cctgattggt cataaggtcg aaatcgcgca gcgcctgcgt gacccaaatc
     4261 aaggcggtca agctgacaag cacgatcagg aacgcactaa acgtcgtgcg gaaaatatat
     4321 cggctgatgg accccatccg cgcgtcgtcc cccagttctg acaagcccca acccccgccc
     4381 ggctccttca ccgggcgcat agagccacca gcgtaaaccc aacccccgtc aggtttacct
     4441 tgatcggtcc acaaagtggc cgaccaaagg caaagccgtt gaacatgcac aataaaaggt
     4501 aaaagccggg gacgggcagg aggccaagat cgtgcctctg gaggctgatc ctgacaagtc
     4561 tagggggcta taaacattgg attttccggg caaa
//
LOCUS       DATILV010000364         2153 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1106967, whole genome shotgun sequence.
ACCESSION   DATILV010000364 DATILV010000000
VERSION     DATILV010000364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2153)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2153)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2153
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1106967"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..291
                     /locus_tag="VLJ17_08215"
     CDS             <1..291
                     /locus_tag="VLJ17_08215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV22998.1"
                     /translation="LARKAVDARKAVYAWSLFGIADLVVALTMGAMTSPGRAHLFAFD
                     APNLLISSYPLVMIPTFDVPLALMLHGLVLWRLRRESGSVEVGLGNAGHSAV"
     gene            344..733
                     /locus_tag="VLJ17_08220"
     CDS             344..733
                     /locus_tag="VLJ17_08220"
                     /inference="COORDINATES: protein motif:HMM:NF039957.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6010 family protein"
                     /protein_id="HSV22999.1"
                     /translation="MKVRAAFLGLVAALVGVLGIDLSFSAYSRLVLALFLSLTACVYL
                     GALLAQAQSSSTWAAELAVAAVVFGCSLLGISASPVWLAFGYGIHGGWDWLHETRTVQ
                     TRVAGWFPPLCATFDLVVGVFILGWVR"
     gene            complement(1155..>2153)
                     /locus_tag="VLJ17_08225"
     CDS             complement(1155..>2153)
                     /locus_tag="VLJ17_08225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_021140576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HSV23000.1"
                     /translation="VFQIHGVDERGKAVLRKQLKRSEVVGFFANLPRSVIGMEACASA
                     HHWARKLIELGHEVKLMAPQFVKPYVKTNKNDRNDAEAICEAVERPNMRFVPVKSPEQ
                     QALLALHRARAGVMKARNAQANQIRGLLGEFGLVLPQGIGQLRRRGPEILEDGDNGLP
                     GLMRALLSRLLAQLAQLDQQVAALEREIVLWHRHNDDSRRVERIAGIGPLTASAYVAS
                     VGNAKGFKNGRQVAAWLGIVPRQDSTGGKPKLLGISKHGDVYLRTLLIHGARAVLRHL
                     EHRPDQADSWLKRLMIRRGKNVAAVALANKNARIAWALLAHQRDFDPHYPSSAPSR"
BASE COUNT          364 a          643 c          650 g          496 t
ORIGIN      
        1 ctggcgcgaa aggcggtgga cgcccgcaaa gcggtctatg cctggtccct ttttggaatc
       61 gcggacctcg tcgtggcgct tacgatggga gcaatgactt ctcctgggcg cgcgcatttg
      121 tttgccttcg atgcgccgaa cctcctcatc tcgtcctatc cgctcgtgat gatacccacc
      181 ttcgacgtcc cgctggccct gatgctccat ggcctcgttc tgtggcgact gcgtagggag
      241 agcggctcag tagaggtggg actaggaaat gcaggccaca gcgccgtctg agctggcgca
      301 ctgcggacgc gacatcgctt ccaggagaaa ctcgataact cacgtgaagg ttcgggcagc
      361 attcttgggc ttggtcgccg ccctggttgg cgtccttggc atcgacctct cattttctgc
      421 ctactcccga ctcgtcctcg cgctgtttct gtccctgacc gcctgtgtgt acttgggcgc
      481 gctgctagcg caggcgcaga gttcgagcac ctgggcggcc gagctcgctg tagccgctgt
      541 ggtgtttggt tgttctctgt taggaatatc agcttcgccc gtttggctcg catttgggta
      601 tggaatccac gggggctggg actggctaca cgaaacccgt accgtgcaga cgcgggtggc
      661 cggctggttt ccaccgttgt gtgcgacgtt cgacttggtc gtgggcgtct ttatactcgg
      721 gtgggtccgg taggtgctca caaaatcctt gccggagttt tgccgaagtc agttatgcac
      781 tgttgtgcac ggtgatgcac tttgcaacgg acgtgaccgc aaaaaacaac gtaaattcaa
      841 taacctgggg gtggaatacc ctacgaacca tatatggacg ctccccggtt tgcaaggcag
      901 tctcttggta ttggcgaaca gatgagattg cagccatata tccggccttc ggttgaggaa
      961 tactgattcc tctggccctg atggaataag ctggttgacg cctcatcaga gggacgaact
     1021 gtgagttcgt ggttcgtatc aggtttggtc aaccacggtc ttacctgttt tgccatcacg
     1081 ttgagcttgc ctgtgcaatc ggtgggcggc attgcgtggc ccttcaaatt aacggttcct
     1141 aagtaggtgg cggtttatcg gctgggtgca ctggacgggt agtggggatc gaagtcgcgt
     1201 tgatgcgcca gcagcgccca ggcgatgcgc gcattcttgt tggctagtgc cacggcagcg
     1261 acgttcttac cgcgcctgat catcaagcgc ttgagccagc tatcggcctg atcgggtcgg
     1321 tgctcgaggt gtcggagtac cgcacgcgcg ccgtggatga gcaaggtgcg cagatacacg
     1381 tcgccatgtt tgctaatgcc cagtagcttg ggtttgccgc cggtggaatc ttgtcgcggt
     1441 acgatcccca gccaagcagc gacttgccgc ccattcttga agcccttggc attgccgacg
     1501 cttgccacat aggcgctagc cgtgagtggc ccaatgccgg cgatgcgctc gactctacgg
     1561 ctgtcgtcgt tgtgccggtg ccagagcacg atctcgcgct cgagtgcggc gacctgctga
     1621 tcgagttgcg caagctgcgc cagcagcctg ctcagcagcg cacgcatcag tcctggcagg
     1681 ccgttatcgc catcctccag gatctcgggt ccccgacggc gcagctgacc gataccctgg
     1741 ggcagcacga gcccgaactc gcccagcagc ccccggattt gattggcctg cgcgttacgc
     1801 gctttcatca cccccgcccg cgcgcgatgc agcgccagca aagcctgttg ctcggggctc
     1861 ttcactggca cgaagcgcat gttcggccgc tcaaccgcct cgcagattgc ttctgcatca
     1921 ttgcggtcgt tcttgttcgt cttcacgtac ggcttgacga actgcggggc catgagctta
     1981 acctcgtggc ccagctcaat gagcttgcgt gcccaatggt gcgcgctggc acaggcttcc
     2041 atcccgatca cggaccgcgg cagattggca aagaagccga ccacctcgct gcgcttgagt
     2101 tgcttacgca gcaccgcttt gccgcgctca tccaccccat gaatctgaaa cac
//
LOCUS       DATILV010000365         2357 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_595802, whole genome shotgun sequence.
ACCESSION   DATILV010000365 DATILV010000000
VERSION     DATILV010000365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2357)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2357)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2357
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_595802"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            230..814
                     /locus_tag="VLJ17_08230"
     CDS             230..814
                     /locus_tag="VLJ17_08230"
                     /EC_number="2.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004671 - protein C-terminal
                     S-isoprenylcysteine carboxyl O-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-S-isoprenylcysteine O-methyltransferase"
                     /protein_id="HSV23001.1"
                     /translation="MTPTISKVIFVALVIGWYLIRYKYARRSRRERIVWSARGPAETA
                     LLLISLAGLGLVPLVYVATAIPRFATYSFHPLFAWLGLFFAIAALGMFHLTHLALGRN
                     WSISLDVRENHKLVTEGIYRRVRHPMYSAFWLWAIAQALLLPNWIAGFAGLAGFAVLY
                     FGRVAREERMMLETFGDSYRAYMARTGRVFPSVL"
     gene            923..1747
                     /locus_tag="VLJ17_08235"
     CDS             923..1747
                     /locus_tag="VLJ17_08235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004126090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HSV23002.1"
                     /translation="MVWTEITRRHYKRGGLRYESDTTDAEWFVMEPLLPRASALGRPR
                     ATAMRAVIDAILYIASTGCQWRQLPKDFPPYSTVQGYFYAWSRGGIFASLNYTLVMAS
                     REAAGREASPTAGVIDSQSVKTTESGGPRGFDAGKKIKGRKRHIVTDTQGNLVGLVVH
                     EASIQDRDGAPRVLASIRSRYPWLRHIFADGGYAGDKLRKALKRIGEWTIEIIKRSDT
                     AQGFEVLPRRWVVERTFAWLGRCRRLAKDFEATIASAVAWAFVAHIRTLTRRLARA"
     gene            1812..2210
                     /locus_tag="VLJ17_08240"
     CDS             1812..2210
                     /locus_tag="VLJ17_08240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23003.1"
                     /translation="MTSEIVRQGRAAWGRLKKGNGDWADWILVGAALLEGRKIAMRNA
                     RTDRPSGTGYVQALHAWQLANRLDLRPLERNDLFKVMAILPDIEAWRATLPPARRARI
                     GRPAAVLHNYRKATGPALERVTPPSQADLR"
BASE COUNT          468 a          663 c          738 g          488 t
ORIGIN      
        1 gtcgaggtcc tgaaaaaagc tcctgccaaa tcgaacaggc ggcgcaagcc ggtggcgatc
       61 gtctcgtgcg atgaaaagcc cggaatccaa gccatcgcga ccacaaatcc cagacgctcg
      121 ctccggatgg cgccgtgtcg atgatcgctg acgacggagg actgattgcg agcgagccgc
      181 tgtcagaaag cgaactgctg ggaagtcccg gcgcggcggc ctaattcaaa tgacgcccac
      241 tatttcaaaa gtcattttcg ttgccttggt gatcggctgg tacctcatac gttataagta
      301 cgcgcggcgt tctcgccgcg aaaggattgt atggagcgct cgcggccccg cggaaactgc
      361 gctactgctc atatctctcg cagggcttgg acttgtgccg ctcgtctacg tagcgacagc
      421 gatacctcgt ttcgcaactt acagctttca tcccttgttc gcttggctgg gacttttctt
      481 tgcgattgcg gctttgggta tgtttcacct gacgcatctc gcgctcggac ggaattggtc
      541 gatcagtctc gatgtgcggg agaatcataa actcgtgacg gaagggattt accggagagt
      601 tcgacacccg atgtattcgg cattttggct gtgggctatc gcccaggcgt tgctgctgcc
      661 taattggatt gccggctttg cgggcctggc cggtttcgcg gttttgtact ttggccgcgt
      721 cgcaagagaa gagcgaatga tgttagagac ctttggcgac agctatcgcg cgtatatggc
      781 gaggactggc cgggtcttcc cgtcggtact ctgaagtagg tcctgacaga tctaggatct
      841 gagagccgga ctgaaaaaga agctgagtga tttcagccag ttgtgattcc ttcggatttg
      901 caaagattcg agggagagca cgatggtctg gactgaaatc actcgtcgac attataagcg
      961 cggtggcttg cgatacgaaa gcgacacgac cgatgcagag tggtttgtga tggagccgct
     1021 tctgccgcgt gcatcagcgc ttgggcgtcc acgtgcaaca gccatgcgag cggtgataga
     1081 tgctatcctc tacattgcgt ccacgggttg ccaatggcga cagttgccga aggactttcc
     1141 accctactcg acggtgcagg gctattttta cgcctggtcg cgtggtggaa ttttcgcctc
     1201 actgaactac actctcgtca tggcgtcgcg tgaggcggct ggccgagagg cgagcccgac
     1261 cgccggagtg attgacagcc agtcggtgaa aaccacggaa agcggtggcc cacggggctt
     1321 tgacgcgggt aagaaaatca agggccgcaa gcgccacatc gttaccgaca cccaaggcaa
     1381 tctggtcggc ctcgtcgtgc acgaagccag cattcaagat cgcgatggcg ccccccgcgt
     1441 ccttgcttcg atccgttcgc gctatccctg gctgcgccat atctttgccg atggtggcta
     1501 tgccggagat aaattgcgga aggctttgaa gcgtatcggc gaatggacga tagaaatcat
     1561 caaacgttcc gacacggcgc agggctttga agttctgccg cgcagatggg tcgtcgaacg
     1621 cactttcgca tggctcggtc gctgtcgcag gctggcaaag gatttcgaag cgacaatcgc
     1681 cagcgccgtt gcctgggcgt tcgtcgccca catccgaacc ctcacccggc gactcgcaag
     1741 agcttgagat caaatgcaat ctttatgagt cggacactta ggccggcggg ctagccgtgg
     1801 gaggagccga aatgacgagc gagatcgtgc gccagggccg cgccgcatgg gggcggctga
     1861 aaaagggcaa tggcgattgg gccgactgga ttctggtcgg cgctgcattg ctggagggcc
     1921 gcaagatagc gatgcgcaac gcccgtaccg atcgcccgag cggcaccgga tatgtccagg
     1981 cgttgcacgc ttggcagctc gccaatcggc tggacctgcg gcccctggag cgcaacgacc
     2041 tgttcaaggt gatggcgatc ctgcccgata tcgaagcctg gcgcgcgacg ctgccgccgg
     2101 cgcgtcgggc gcgcatcggc cgcccggccg cggtgctgca caactatcgg aaagcgaccg
     2161 ggccggccct ggagcgcgtc accccgccat cccaagctga ccttcgataa tcacggtagt
     2221 aagcagggtt cagtcggttg accaacggat gcgccctgga atgcggtgtc ggctttcgcc
     2281 agctgcggac gtgccgtcgc acacgtccgg ggcaggtatg ggccaaatcc gaactctagt
     2341 cgatgacatg cttggaa
//
LOCUS       DATILV010000366         5688 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1365495, whole genome shotgun sequence.
ACCESSION   DATILV010000366 DATILV010000000
VERSION     DATILV010000366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5688
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1365495"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1613
                     /locus_tag="VLJ17_08245"
     CDS             <1..1613
                     /locus_tag="VLJ17_08245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018900522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HSV23004.1"
                     /translation="SSRLVLAHFWAAFAAFAVMIPLGAWQMLVRSPLHRWVDPELYYQ
                     AVTAHGTTLAYIFPTLVAMGFGYAVCAVSLGRPMHGLRLAWASFGLVIAGAAMAVTTV
                     AAGKATVLYTFYPPLVGSPYYYLGVLIAVIGSWVWVGLMISHFRRWKRDYPGLPVPLA
                     MFATTAGALLWAWTSLGVGAEVVLLILPNTFGWTDTIDAGLARLLFSWTLHAIVYFWL
                     IPPYVAFYTLLPQAAGGRLYSDKMGRIAFLLLLIFAMPIGIHHLFADPQIGAGFKFLH
                     AVFTGMVAVPTLLTIFTICASLEIAGRLRGGSGLLGWIAVLPWDRPIVLASALSLLML
                     GLGGASGLINMSYALNLTIHNTQWVTGHFHLIYAGAIVIMYFAIAYELWPRLTGRPFA
                     SPNLVRLQLWTWFGGMMILTLPWHLVGAMGQPRRMAYYDFADPALAPQAIWVSVSTIG
                     GFILVFSALLLIGILLPSHRGPSAAVSPLKFSLAVNPPRRLPKSLNSFGVWTLLMIAL
                     TVANYGYPLAQFLLLDNTSVPAYSRQIR"
     gene            1610..2431
                     /locus_tag="VLJ17_08250"
     CDS             1610..2431
                     /locus_tag="VLJ17_08250"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HSV23005.1"
                     /translation="MTSRDPPTSPDTRFAVWIGATVALFLVAVLIGFVWLPSAQRNSE
                     GLDLWNAICRAVGLPNVSAPTSVAIAAKPASTVAWTAETRRRLAQGNAVRGAALATTC
                     NNCHGANGISADAAFPNLAGQSVDAIYKQLEDYRSGKRNPTVMGVFVSPLSEQDILDL
                     ATHFASLPSPFAGLPSKFSPTDISVRDLIEVGDPARGMAPCAACHGPLGSTPGAPGLR
                     GQQRAYLEQQMQAFVTGDRRNDIREQMRTIARQLTSAEIAMIAAHYSNVASNAEP"
     gene            2689..3117
                     /locus_tag="VLJ17_08255"
     CDS             2689..3117
                     /locus_tag="VLJ17_08255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23006.1"
                     /translation="MTIYWVVLAPLIGVICVVTRWRDAKNREQRLHLVCTQALHWSAV
                     LLAMHLMFVTDVGRMMNADASALAALTVLALGTFTAGVHIAAWRICLVGIVLGIGVPA
                     IAWLEQSALLILLAAMLLTAVIAPFFWRDRGESKHQPLPT"
     gene            3130..3486
                     /locus_tag="VLJ17_08260"
     CDS             3130..3486
                     /locus_tag="VLJ17_08260"
                     /inference="COORDINATES: protein motif:HMM:NF023170.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3302 domain-containing protein"
                     /protein_id="HSV23007.1"
                     /translation="MMEALLGFSLGFWDYATFAAMFVIVAAGLATAVFILGLPGRIAI
                     ARKHPEADAVNLMGWVGFVAIVPWIQALIWAFKPTDVVDLRYLPKDVKRETDAMIARL
                     EGRDLPNESNVESSAP"
     gene            3483..4640
                     /locus_tag="VLJ17_08265"
     CDS             3483..4640
                     /locus_tag="VLJ17_08265"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSV23008.1"
                     /translation="MMVAILVLIFACTVFWLVFFKAKLLRLTPGWGIIFAFFVVHLLL
                     VFVIGLRFVTPNSANATVVQRTIQLVPRLPEPTLVTAVLVEDNVPVKKGQPLFQFDRR
                     PYEYKVEQISAQLAEAKQNVNILKADVAIANQKAIRTKVELGYEIYQKGIFDKLAKEQ
                     AVRGEDIEKWATRVTTVQATHDEAQAELERARLKYESEIGGVNTTVANFEAQLRQAQY
                     YLDNTTLTAPEDGRIINLQVRPGMVSGIIRVGGIAAFIADTDRYLLATFYQENLKYVR
                     PGQSTEIALDLYPGQIFTGKVADIWRGNGSGQYLPSDDIPKFQPPPPNVPQGQYAVKI
                     VIDDPDQSKFPIGAQGSAAIYTGGERGAWAVLRKISIRGHSWFNWLYPLNV"
     gene            5483..>5688
                     /locus_tag="VLJ17_08270"
     CDS             5483..>5688
                     /locus_tag="VLJ17_08270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23009.1"
                     /translation="MRISACALLISAILGLGLPQAASAADLPVKAPVYKAPIAVPVYN
                     WTGFYVGANIGGAWSNITLTDNNLG"
BASE COUNT         1122 a         1633 c         1610 g         1323 t
ORIGIN      
        1 gtagtagccg cctcgtatta gcccatttct gggccgcctt cgcggccttt gccgtcatga
       61 ttccgctcgg ggcgtggcaa atgctggtgc gcagccccct gcatcgatgg gtggatccag
      121 aactgtacta ccaagcggtc acggcgcatg gtaccacgct cgcttatata ttccccacgc
      181 tcgttgcgat gggattcggg tatgcggtct gcgcggtgtc gctcggccga ccgatgcacg
      241 gcttgcggct cgcgtgggcg tcttttgggc tggtgatcgc aggcgctgcg atggcggtca
      301 cgaccgtggc tgccggcaaa gcgacggttc tttacacgtt ctatccgccg ttggtcggca
      361 gcccgtatta ttaccttggc gtcctgatcg cggtgatcgg ctcgtgggtc tgggtcggcc
      421 tcatgatctc gcacttcagg cgctggaaac gcgattatcc gggcctgccg gttccgctcg
      481 caatgttcgc caccacggcc ggcgcactgc tgtgggcctg gacctctttg ggggtcgggg
      541 cggaggtcgt gctcctgata ttgccaaata ccttcggctg gacggacacg atcgatgcag
      601 gtctcgcgcg gcttctattt tcctggacct tgcatgccat cgtctacttc tggctgatcc
      661 ctccctacgt cgcattctat acgttgctgc cgcaggcggc cggcggccga ctgtatagcg
      721 acaagatggg tcgaatagcg ttcctgctac tgttgatctt tgcgatgccg atcggcattc
      781 atcatctctt tgcggatccg caaatcggtg ccggctttaa atttctccat gccgtgttca
      841 ctggaatggt cgccgtacct acgctactca cgattttcac catatgcgct tcgctcgaga
      901 tcgcgggtcg tttgcgcggt ggcagcggcc tgcttggctg gatcgctgtc ttgccttggg
      961 accgcccaat cgtactggct tcggcacttt cgctactcat gctgggccta ggaggcgcaa
     1021 gtggactgat caatatgagc tatgcgctga acctgactat ccacaacact caatgggtca
     1081 cggggcattt ccacctgatc tacgcagggg cgatcgtgat catgtacttc gcaatcgcgt
     1141 acgaactctg gccgcgtttg accggtcggc cgttcgcatc gccaaatctc gtgcggctgc
     1201 agctctggac ttggttcggc ggcatgatga tccttactct accttggcat ctcgtcggtg
     1261 ccatgggaca gccccgacgc atggcctact acgacttcgc cgatcctgca ctggcacctc
     1321 aagcgatctg ggtcagcgta tcgacgatcg gcggcttcat tcttgttttc tcggcgctgc
     1381 tgctgatcgg aattctgctc ccgtctcatc gtggacctag tgccgcggtt tcgcccctca
     1441 aattttctct cgcagttaat ccccctcgtc gattaccaaa gtctctaaac agtttcgggg
     1501 tctggacgct tttgatgatc gccttaaccg ttgcaaacta tggctatccg ctagcgcagt
     1561 ttctgttgct cgataacacg agcgttcctg cctattcgcg tcaaatacga tgaccagccg
     1621 tgacccacca acttcgcccg acacccgatt cgctgtatgg atcggcgcca cagtcgcgct
     1681 atttcttgtc gcggttctga tcggctttgt atggttgccc tcggctcagc gaaactcaga
     1741 agggctcgat ctttggaacg ccatctgccg tgcggttggc ttgccgaacg tgagtgcacc
     1801 gacttccgtg gcgatagccg cgaaaccagc ttcgacggtt gcttggacag ccgagacgcg
     1861 acggcgactt gcacaaggta atgctgtgcg cggcgcggcg cttgcgacga cctgcaacaa
     1921 ctgccatggc gcgaacggta tcagcgctga cgcggcattc ccaaatctag ctggccagag
     1981 cgtggatgcg atctataagc agcttgagga ttataggagc ggcaaacgaa accccacggt
     2041 gatgggcgta ttcgtctccc cgttgtcaga gcaagacata cttgatcttg cgacgcactt
     2101 cgcttctctt ccgagcccat ttgccgggct gccgagcaaa tttagtccca ctgacatatc
     2161 cgtgcgagat ctgatcgaag tcggcgatcc ggcaagaggc atggcgccct gcgcggcgtg
     2221 tcatgggccg ctcggctcta cacctggtgc tccgggacta cgaggccaac agcgcgccta
     2281 tctcgaacaa cagatgcagg catttgtgac gggcgatcgt cgcaatgata tcagagagca
     2341 aatgcgtacc atcgctcgcc agttgacgag cgcggagatc gcaatgattg ctgcgcatta
     2401 ttcgaacgtt gccagcaatg ctgaaccgta ggaggagaac cccaacgcga tccggcacca
     2461 aaggccaata tcgctttcgg cttccccgcg gtaaggtaca tgcctgaccg gtttgacgcg
     2521 gatcgttcgc ttacgaactc ggtgatcgta atgggtgcac aatcgggctc tgcatcttta
     2581 ggaccgcgat ccaagtcgct gacgtttgtt ggacgcgagt ggccctatct agcagtgcta
     2641 gttcttgcaa tctttggcgt tgcttacacg agctttgctc aaactccaat gacgatctat
     2701 tgggtcgttc tagctccgtt aattggagtc atctgtgtcg tcacgcgctg gcgagatgcc
     2761 aagaatcgag agcaacgtct gcatctggtg tgcacgcaag ccttacactg gagtgcggtg
     2821 ctcttggcaa tgcatctcat gtttgtgacc gacgtcggcc ggatgatgaa cgctgatgcg
     2881 agcgcgcttg ctgctctgac agtgttggcg ctagggacct ttacggccgg cgtccacatt
     2941 gcggcgtggc gtatctgctt ggtcggtatt gtactcggaa ttggggttcc ggcaatcgca
     3001 tggcttgaac aatcggcatt gctgattctg ctagcagcca tgcttctcac cgctgtgatc
     3061 gcgccgttct tttggcgaga cagaggggaa agcaaacatc aaccgctacc cacctgagcc
     3121 cagaggaaca tgatggaagc gttattggga tttagtctcg gattttggga ctacgcgacc
     3181 tttgcggcga tgttcgttat cgtcgctgcc ggcctagcta ctgcggtatt catcttgggc
     3241 ttgccaggcc gtatcgcgat cgcccgcaaa catcctgagg ccgacgccgt caatctgatg
     3301 ggctgggtcg gctttgttgc gatcgttcca tggattcagg cattgatttg ggcgttcaaa
     3361 ccaaccgacg tcgtcgacct gcgttacctg cccaaggatg taaaacgcga aaccgacgcg
     3421 atgatcgccc gattggaggg cagggatctg ccgaatgaat cgaacgtgga gagttctgcg
     3481 ccatgatggt agcaatcctg gtcctcatct tcgcctgcac ggtcttctgg cttgtcttct
     3541 tcaaggccaa actacttaga ctcactcccg gttggggcat catcttcgcg tttttcgtgg
     3601 tccacctgtt attggtgttc gtcatcggtt tgagatttgt aacgcctaat tccgcaaacg
     3661 cgacagtcgt tcagcgaacg atccaactgg ttccacgcct ccccgagccg accctcgtta
     3721 ccgcggtatt ggtcgaggac aatgttccgg taaagaaagg tcagccactg ttccagttcg
     3781 atcgtcggcc gtacgagtac aaggtcgagc agatcagcgc gcaactcgcc gaagccaaac
     3841 agaatgtcaa tattctcaag gcggatgtgg ccatcgcgaa ccagaaggcg atcaggacca
     3901 aggtcgagtt gggatatgaa atctatcaaa aggggatatt tgacaagctg gcaaaagaac
     3961 aggcagtacg aggggaggat atcgagaagt gggccactcg cgtcaccacc gtgcaggcaa
     4021 cgcatgacga ggcacaagct gaactagagc gggctcggct caagtacgaa tctgagatcg
     4081 gcggcgtcaa cacgacagtc gcaaatttcg aagctcagct tcggcaggct cagtactacc
     4141 tcgacaacac gacgcttact gcccccgaag acggccggat catcaatctt caagtccggc
     4201 caggaatggt gtccggcata atccgcgttg gcggtatcgc ggcctttatc gccgacaccg
     4261 accggtattt gctcgcaacg ttctaccagg agaacctcaa gtacgtccga cccggccagt
     4321 ccacggagat cgcacttgat ctctatcccg gtcagatatt cactggcaaa gttgccgaca
     4381 tttggcgtgg caacgggtcg gggcagtatt taccaagcga cgatatccca aaattccagc
     4441 ccccgcctcc gaacgttccc caaggtcaat atgcggtgaa gatcgtcatc gacgatccgg
     4501 accaatcgaa atttcctatc ggggctcagg gcagcgccgc catctacacc ggcggagaac
     4561 gcggtgcctg ggccgtgctg cgaaagatct cgattcgcgg ccattcatgg ttcaactggc
     4621 tctatccgtt aaatgtttga gaagagcctg cgctgcttgg ccaggcttcg cccttcccgt
     4681 tcgctccttg agccatgacc aagccctcct tcgtccagag tacgccgttc cgtgctccac
     4741 gggggacatc tccctcgaag aaaaaggcct cgcctaagca gggccagttt tggatgggtg
     4801 cctcccgcct aagcgcaaca aattgatcgg tgctcgaaag cctcaacgcc aagacgggag
     4861 acagcacttg gtgtcaggca gcaggtaaaa ggttcaaccg cccgcaagat ttgttgccga
     4921 ggccaaagcg ccccttctcg gcacccattg attaggcgtt ttgcgccgaa ggtttgagtg
     4981 ttgctgagaa gtccgacaac cgtgcccacg gcgcaggccg acagaagacc acgggggccg
     5041 cgaacaaact gtgcagaccg ggaagaacgc gttttctcaa cagtgtcatc attgaaaatc
     5101 ctcccagccc gatataggcg gtgtcgtcgc ccgcaacgtg ggatgcgaat gtgcagatgc
     5161 cggcgccatt tgcgcccgtg cgatgacgtt ttcgggatag gaactgtctg gattggagct
     5221 gtgcctaccg gcggcctagt ctgccattat ggagaatggc gacttcggta cgtcgccatt
     5281 ttgcggcagc tctcgggcaa gttcctgctt actgcgtggc aacagtctgc ccgattcaag
     5341 attcatgtca atcgatgctc tggtgttgcg cgaaaacaac ggccaaatca ttaatactat
     5401 aacaagcatc gatttcggat tggtcgcccc agattcgaat taggatccga ttagcgttcg
     5461 tacgctgtct gggggagctg aaatgagaat cagtgcttgt gccttgctga tctccgcaat
     5521 tttgggcctc ggcctgccgc aggctgcctc ggcggccgac ctacccgtca aggctccagt
     5581 ctacaaagcc ccgatagcgg tgcccgtcta caattggacg ggtttttatg tcggcgccaa
     5641 cattggaggg gcatggtcca atatcacgtt gacggataac aacctcgg
//
LOCUS       DATILV010000367         2279 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1365682, whole genome shotgun sequence.
ACCESSION   DATILV010000367 DATILV010000000
VERSION     DATILV010000367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2279
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1365682"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..398)
                     /locus_tag="VLJ17_08275"
     CDS             complement(<1..398)
                     /locus_tag="VLJ17_08275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23010.1"
                     /translation="MAGGEAEAISIVPGRACGDCSLCCKLIRVDAFAKPPGTWCAHCA
                     PGKGGCTIYDSRPTECRSFHCAWLQSPSLGEEWRPSKCKLVLRVESDGKLIAVHVDPS
                     DPTAWHREPYFRTLKQFAIKGADTNQQVIV"
     gene            1049..>2279
                     /locus_tag="VLJ17_08280"
     CDS             1049..>2279
                     /locus_tag="VLJ17_08280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secretin N-terminal domain-containing protein"
                     /protein_id="HSV23011.1"
                     /translation="MVACTNLPINNNQEVTGGPDIMDGVRKLDLLPRYPQQPGRADQT
                     GGTGAKAQVYTGVTIPAVEGARTPPTSSGEGYELNFENTPIASVAKVVLGDILAVGYT
                     IDPRVMGMISLSSGRPVPKSDLLFVLENALRLSGVVLVKDVQGFRLIPLGDAVGAGNL
                     DPTEAHAEPGYGVSAVPLRYVSATTLIKLLDSFATKPGTVRADTTRNLLLIQGSGAER
                     RAAIETVLGFDVDWMRGQSVGVFPIRYTAPEPIITELEKIMDSGDGGLSQNIVKFQPI
                     SRLNAILVVTRKPDLLRSAETWIRRLDAADTARAGVHVYRVRYGDARQLARVLNDIFV
                     GGGSLDSGASQVDRRSGLGMTASADRLSPGTGAGAAGGGLGGGLGGATAAAGGTTFGT
                     GGGGGGRGGAAGGGGLGS"
BASE COUNT          400 a          658 c          761 g          460 t
ORIGIN      
        1 tagacgatca cctgctgatt ggtgtccgcc cctttgatgg cgaattgctt gagcgtgcga
       61 aaatacggct cccggtgcca agcagtgggg tcgctcggat cgacgtgaac ggcgatcagc
      121 ttgccatcag attccacgcg caagacgagt ttgcacttgc tcgggcgcca ttcctcgccg
      181 aggctcggcg attgcagcca ggcgcaatga aaactgcggc actcggtcgg ccggctgtcg
      241 tagatggtgc atccgccttt gccgggtgcg caatgcgcgc accatgttcc gggcggtttt
      301 gcgaacgcgt cgacccgaat gagtttgcag catagcgaac agtcgccgca ggcgcgtccg
      361 ggcacgatcg aaatcgcctc agcctcgccg cccgccatcg ggagcctctc gtttaaggag
      421 aacgatgcca aatcgctcct tttgattgtt taagaatccg acgatttgcg tgggctgatt
      481 gtttgctgag ctcaagaggc acgaagttac cgacgccaat tgaattcgaa ccacaattgc
      541 gcgtcaaggc cacgcgcaat aggcgcgctt ccacgcttct gggcttaacg gctgcattga
      601 cgagggcgcc aagtgtggcg gattggacac aacgtcctat caaatgcata tagtcacgac
      661 atgaccccga atcggccgct ttgcaggcga gtctcatctg tacgaaaatt gtacgcagtc
      721 tctgcacgtt gggggctttc tacgttgccg tgtggtgttg gcgttgtaag tggttggcta
      781 ccgtgggctt cgaggatagg gcgtgaattg acgttgcgtt aaggttagcg cggggctagt
      841 tttgtcgttg gggggattgc tagcagtcgc tgtcatcctt gattgctttc aggcctttcg
      901 cggccgaggg aggtttcggg cgtgatgcga acgcatgtgg cagcttcggg ggcagcgtag
      961 caacttgagt gcagctggca actttgcaag ggattcccgg tcgctccgcg gcggaacgtg
     1021 ggcgacgttt tttttgttaa gttttggcct ggtcgcctgc actaacctgc cgataaacaa
     1081 caaccaggag gtaaccggcg gtcccgatat catggatggg gtgcgcaagc tcgatctcct
     1141 gccgcgctat ccgcagcagc ctggccgcgc agaccagact ggcggcaccg gcgccaaggc
     1201 gcaggtctac actggagtca ccattccggc cgtcgagggg gcacggactc cacccacatc
     1261 gagcggcgaa ggatacgagc tcaacttcga gaacacaccg atcgcatcgg tcgcgaaggt
     1321 cgtcctcggc gatattttgg cggtcggcta caccatcgat ccgcgcgtca tgggtatgat
     1381 aagcctttca tccggccggc cagtaccgaa atccgacctg ctgttcgtgc tcgaaaacgc
     1441 cctgcgcctg agcggcgtcg tcctggtgaa ggatgtccag ggctttcggc tgattccact
     1501 cggcgacgcg gtcggcgccg gcaacctgga tccgaccgag gcgcacgccg agccgggcta
     1561 cggcgtttcg gcggtaccgc tgcggtacgt ttccgccacc accttgatca agctgctcga
     1621 cagcttcgcg acgaagcccg gcacggtgcg cgccgatacg acgcgcaact tgctgctcat
     1681 tcagggcagc ggtgccgagc gtcgtgccgc gatcgagacc gtgctcggct tcgacgtcga
     1741 ttggatgcgc ggacagtccg ttggcgtatt tccgatccgt tatacggctc ccgagccgat
     1801 cataacggag ctggaaaaga tcatggattc tggcgacggg gggctcagcc agaatatcgt
     1861 caagtttcaa ccgatctcgc gtttgaacgc cattttggtg gtcacccgaa agccggacct
     1921 gttacggtcg gccgagacct ggatcaggcg gctcgacgcc gccgatacgg cgcgagcggg
     1981 cgtgcacgtg tatcgggtca ggtacggcga cgcgcgtcag ctcgcgcgcg tgctcaacga
     2041 tatttttgtc ggcggcggct cgctcgatag cggggcaagt caagtcgatc ggcggagcgg
     2101 cttgggcatg acggcaagtg ccgatcgcct gtcgcctggc accggtgcgg gcgctgctgg
     2161 gggcggcctt ggaggcggcc ttggaggcgc gacggcggcc gcgggaggca ccacgttcgg
     2221 gaccggcggc ggcggcggcg ggaggggcgg ggcagccggt ggcggcggcc tgggctcgt
//
LOCUS       DATILV010000368        16074 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3664019, whole genome shotgun sequence.
ACCESSION   DATILV010000368 DATILV010000000
VERSION     DATILV010000368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 16074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16074
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3664019"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1436
                     /locus_tag="VLJ17_08285"
     CDS             <1..1436
                     /locus_tag="VLJ17_08285"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HSV23012.1"
                     /translation="GAETDLDLGHYERFTGRPATRHDNITTGRIYQDILAKERRGDYL
                     GATIQVIPHVTNAIKEFILHGNDRFDFVLVEIGGTVGDIEGLPFFEAIRQLGNELPRR
                     NVIYIHLTLLPFIPSAGELKTKPTQHSVKELRSIGIQPDILLCRSDRPIPKDEKRKLS
                     LFCNVRESAVIEAHDVDNIYAVPEAYHTAGLDSEVLAAFGIHEAPPELDRWRIINERI
                     RNPEGAVTIAIVGKYTGLKDAYKSLIEALSHGGIANKVKVDLDWIESEVFEREDPAPF
                     LEHVNGILVPGGFGQRGAEGKIRAAQFARERHMPYFGICFGMQMAVIEAARNLCGITK
                     ANSSEFGATSEPVVGLMTEWLKGNELQKRGVNGDLGGTMRLGAYAALLERGSRVANIY
                     GAMDISERHRHRYEVNTGYRARLEQHGMRFSGMSPDGILPEIIEYTDHPWFIGVQFHP
                     ELKSRPFEPHPLFASFVEAAVVQSRLV"
     gene            1799..2677
                     /gene="kdsA"
                     /locus_tag="VLJ17_08290"
     CDS             1799..2677
                     /gene="kdsA"
                     /locus_tag="VLJ17_08290"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HSV23013.1"
                     /translation="MTAQTSLPPKPIVAAGTVRFGNDLPLALIAGPCVLESRGHALDI
                     AGALKEIAGRIGIGLVYKTSFDKANRTSAASARGVGLEGALAVFEEIRAKLGLPVLTD
                     IHESGQCAEVAAVVDVLQIPAFLCRQTDLLVAAASTGRSINVKKGQFLAPWDMAHVVA
                     KITGAGNANVMVTERGASFGYNTLVSDMRALPILARTGAPVIFDATHSVQQPGGRGAA
                     SGGEREFVPVLARAAVAVGVAGVFIETHQDPDRAPSDGPNMVPLQDMEGLVRRLMAFD
                     RLAKDTSNRSPVWRGG"
     gene            2852..4057
                     /locus_tag="VLJ17_08295"
     CDS             2852..4057
                     /locus_tag="VLJ17_08295"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV23014.1"
                     /translation="MTSPSDRGTIPGAVRRVLAITALCNFASSLFMRAIDPMIPQVAY
                     DLAIDPATATLLTTAFALPCAALQPVLGPLADMIGKTRLMTICLGVLVINGFVGAAAP
                     NFQVLLVSRVASGVAVGGIFPSALAIAGDLVPVHQRQVAISRLLAASMLGSLLGTPMA
                     GIVGDLVSWRGVLAVIGLVCVAAFITTVIGLRRVALRPGITVNLDAVVTGYRTIFQNP
                     HAKICYGAVMLEGTFMMGIFPYVALLLRENGEPRAAIAGVVIAGFALGGVIYSLTVSR
                     LLALLGESGLMLTGAGFMSCALLAVALRAPWPVQMAEFLLLGCGFYMMHGVIQIYATE
                     LAPAARGSAAALHSASFFLGLAIGPVYFGYGLAYAGLLPTVALSAAVILLTGYVCSKT
                     LRPSRPPTV"
     gene            complement(4070..4534)
                     /gene="queF"
                     /locus_tag="VLJ17_08300"
     CDS             complement(4070..4534)
                     /gene="queF"
                     /locus_tag="VLJ17_08300"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033739 - preQ1 synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preQ(1) synthase"
                     /protein_id="HSV23015.1"
                     /translation="MPRKMPHKPIHLGQPSKIPASPDEAVLDRVSNPHPDTDYVARFT
                     FPEFTTMCPVTGQPDFAIVVIDYVPNRFLIESKSLKLFLNSFRNHAAFHEDCTVGIGK
                     RLFDHLKPRWLRIGGYFHPRGGMPIDVFWQAGRLPRGAWAPDQGVRGYRARE"
     gene            4641..5933
                     /gene="eno"
                     /locus_tag="VLJ17_08305"
     CDS             4641..5933
                     /gene="eno"
                     /locus_tag="VLJ17_08305"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004634 - phosphopyruvate hydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HSV23016.1"
                     /translation="MTAIVDIIGREILDSRGNPTVEVDVALEDGSLGRAAVPSGASTG
                     AHEAVELRDGDKKRYAGKGVRKAVDAVNGEIFDAIGGMDAEAQVKIDETLIALDGTPN
                     KARLGANAILGVSLATAKAAAAARGLPLYRYVGGASARTLPVPMMNIVNGGVHADNPI
                     DFQEFMIMPVGAENFAEGLRTGVEIFQTLKKALRDAGHNTNVGDEGGFAPNLPSADAA
                     LGFVMKAIEAAGYRPAEDVVLALDPASTEFFKNGAYHYEGEGKVRTRDEQVKYLAQLV
                     QRYPIVSIEDGMAEDDFDGWKALTDAIGARCQLVGDDLFVTSVRRLAHGIQRGLGNSI
                     LVKVNQIGSLTEALAAVEMAQKAAYSCVMSHRSGETEDATIADLAVATNCGQIKTGSL
                     ARSDRTAKYNQLLRIEQELGPQARYGGRAAVKGLAVPP"
     gene            6020..6337
                     /locus_tag="VLJ17_08310"
     CDS             6020..6337
                     /locus_tag="VLJ17_08310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015685876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation initiator family protein"
                     /protein_id="HSV23017.1"
                     /translation="MVIRPRIRAFLTALGLYLVAALFIGYFGVNAYTGKNGINARQGL
                     DQQIADLAGEVERLKAERARWERRVALLKADRIDPDILDERARQVLNYLDPHDVTIMI
                     KRR"
     gene            6417..7484
                     /gene="pdhA"
                     /locus_tag="VLJ17_08315"
     CDS             6417..7484
                     /gene="pdhA"
                     /locus_tag="VLJ17_08315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045250 - cytosolic pyruvate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring) E1
                     component subunit alpha"
                     /protein_id="HSV23018.1"
                     /translation="MVLAKNRKPAAVPAEKSRPDTSTSRQPGDDVPDVPPGPDKEVEL
                     RAYRDMLMIRRFEERAGQMYGMGLIGGFCHLYIGQEAVVVGMQLALQPGDQVITGYRD
                     HGHMLASGMDPRGVMAELTGRRSGYSKGKGGSMHMFSVEQNFYGGHGIVGAQVSLGTG
                     LAFANRYRQNGNVCLTYFGDGAANQGQAYESFNMAELWKLPVVYIIENNRYAMGTAVT
                     RASAQADFSKRGLSFNIPGEQVDGMDVRAVMAAGERAVQWCRDGNGPIILEMMTYRYR
                     GHSMSDPAKYRTREEVEKIRAERDPIEQVRVRLLATKRANEDELKRTDAEVRKIVNEA
                     AEFATHEPEPDPAELWTDVVR"
     gene            7702..9111
                     /locus_tag="VLJ17_08320"
     CDS             7702..9111
                     /locus_tag="VLJ17_08320"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex E1 component
                     subunit beta"
                     /protein_id="HSV23019.1"
                     /translation="MPIQVLMPALSPTMEKGNLAKWVKGEGDRIRSGDIIAEIETDKA
                     TMEVEATDEGTLGKILVPEGTADVAVNTPIAVILSDGEDTKALNGPGAASAAPKAEGA
                     MEMKGPLKATLTKIAPAVAAASHPATALETQRDHDVLEDAEMVTMTVREALRDAMAEE
                     MRRDPDVFVIGEEVAEYQGAYKVTQGLLQEFGAARVIDTPITEHGFAGLGVGTAFAGL
                     KPIVEFMTFNFAMQAIDQLINSAAKTLYMSGGQMTCSIVFRGPNGPAARVGAQHSQDF
                     SSWYAHVPGLTVIAPFTAADAKGLLKSAIRYPNPVVFLENEILYGHSFAVPKLDDYLV
                     PIGKARIARPGEHVTIVSWSMGMTYALKASEELEKENISAEIIDLRTLRPMDTATIVR
                     SVEKTGRCVVVEEGWQQSGIGAEIAARLMEQAFDYLDAPVMRVSGKDVPMPYAANLEK
                     LALPSAAEVVAAVKAVCYR"
     gene            9175..10152
                     /locus_tag="VLJ17_08325"
     CDS             9175..10152
                     /locus_tag="VLJ17_08325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009029397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSV23020.1"
                     /translation="MFWLATVFFAAVAWLLTGAGPATAYPERPVTIVVPFAAGGPTDV
                     IARIISDHWSRALGQQFVIENVTGAGGTVGATRVKRAASDGYTLLLGNLGTQAASVGL
                     YPNLAYDPRTDFEFILNVAATPLLVVAKNDLPVEDFRDFIAYMKANEGKLNYGTGGVG
                     ATSHLACLFLDHLLGTKTTHVPYRGSGPALQALIGGQIDYVCDQTVGIVPSIQGRLVK
                     ALVIASHERSPVLPNVPTSVEQGLADFRTTGWNVMLAPKGTSNVIVDQLNGAGRAALK
                     DEVVRKRLLELGADLPAESEQTRTSAAELVRAEIEKWVPIIKAAGVVVN"
     gene            10161..10568
                     /locus_tag="VLJ17_08330"
     CDS             10161..10568
                     /locus_tag="VLJ17_08330"
                     /inference="COORDINATES: protein motif:HMM:NF028136.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5076 domain-containing protein"
                     /protein_id="HSV23021.1"
                     /translation="MALIRDHEIYDALLISGEALDKGGIEILRAGIVDEKLLITARRV
                     FADPAHWGYVLADIARRLAALYGAETAFTEAKVSGAIAGAFAKSFRPTATGLTRKPVQ
                     RQPAKSAGPPAKARAKSKPSTKAVRRKGARAKP"
     gene            10578..11966
                     /locus_tag="VLJ17_08335"
     CDS             10578..11966
                     /locus_tag="VLJ17_08335"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007590625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045254 - pyruvate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0004738 - pyruvate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0004742 - dihydrolipoyllysine-residue
                     acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex dihydrolipoamide
                     acetyltransferase"
                     /protein_id="HSV23022.1"
                     /translation="MPINILMPALSPTMEKGNLAKWLKKEGDKVKAGDVLAEIETDKA
                     TMEYEAIEDGVLAKILVQEGTADVAVNEPIAVLAAEGEDLKAVVAPSASATKPAVPSE
                     PHPAPSASPKTGRDEAPQKSQNPSSSSGRTASLSEPGAAPATNGHAGRIFASPLARRL
                     AKAAGIDVVRIAGTGPHGRIVARDVEAAMPDGAALRAPVPQRPAPQPPVVAPVQPPAD
                     DNKIRALFEPGSYEVVPHDNMRKIIAQRLVLAKQTIPHFYLTISCTLDKLLSAREDIN
                     VTAPKGADGKPAWKLSVNDFVIKALALALIKVPQANVTWTETGMLKHKRADIGVAVAI
                     PGGLITPVIRKAETKSLIAISAEMKDYAARARARKLKPEEYQGGSSAISNLGMYGIEE
                     FAAVINPPHATILAVGAGVENAVVRDGKLAIATQMKVTLSTDHRAVDGALGAELIGAF
                     KTYIESPTAMLV"
     gene            12287..13705
                     /gene="lpdA"
                     /locus_tag="VLJ17_08340"
     CDS             12287..13705
                     /gene="lpdA"
                     /locus_tag="VLJ17_08340"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018458055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA];
                     GO_process: GO:0051068 - dihydrolipoamide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HSV23023.1"
                     /translation="MAESFDIIIIGSGPGGYVTAIRAAQLGLKTAIVERAYLGGICLN
                     WGCIPTKALLRSAEIFHYMQHAKDYGLAAEKVSYDAAAMVKRSRGVSKRLNDGVGFLM
                     KKNKVSVIWGEAAIDAPGKVTVKPVKTEAPKGALGPGAYQAKHIIIATGARPRVLPGI
                     EPDQKLVWTYFEAMVPERMPKSLLVIGSGAIGIEFASFYRAFGADVTVVEVLPQILPV
                     EDAEIAAFARKAFEKQGIKIFTGAKVSRLDKKSDSVTATIDDGKGGTQTLAVDRVISA
                     IGVTGNVENLGLERLGVKIDRGSIAIDGYGRTNVPGIHAIGDVAGPPMLAHKAEHEGV
                     VCVEAIKGLKPHPMDKLKIPGCTYCAPQIASVGLTEAAAKEKKLDIRVGRFPFIGNGK
                     AIALGEDQGLVKVIFDKATGQLIGAHMIGAEVTELIQGYVVAMNLETTEEELMHTVFP
                     HPTLSEMMKEAVLDAYGRVLNM"
     gene            complement(13826..14395)
                     /locus_tag="VLJ17_08345"
     CDS             complement(13826..14395)
                     /locus_tag="VLJ17_08345"
                     /inference="COORDINATES: protein motif:HMM:NF015142.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dual specificity protein phosphatase family
                     protein"
                     /protein_id="HSV23024.1"
                     /translation="MVFADFCWPFMLAQPSMAQKIQPQQHSEWAVPLSLAGVPNLHQV
                     APNFYRSAQPDAQGFAQLNKRYGIRTVVSLRAFHSDKPLTKGLSLRLYDFPMHTWHIE
                     REDVVGALRALRLATQHDPTLLHCKHGADRTGLITALYRIVYQGWSKDAALDEMQNGD
                     FGFHDMWINIPRYLRGIDIVALKRDVDVP"
     gene            complement(14629..>16074)
                     /gene="phaC"
                     /locus_tag="VLJ17_08350"
     CDS             complement(14629..>16074)
                     /gene="phaC"
                     /locus_tag="VLJ17_08350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0042619 - poly-hydroxybutyrate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I poly(R)-hydroxyalkanoic acid synthase"
                     /protein_id="HSV23025.1"
                     /translation="SNQYFDFLKQAYLIIADWAKYLIEHANQLDPAVRQKADFYVRQI
                     VNALSPSNFIVTNPELLRVTLAESAENLVRGAQMFAEDIEAGGGGLRIRQSDMSKFEV
                     GRNLAITPGKVIYQNALMQLIQYSPSTARVLKRPLLIVPPWINKYYVLDLTPAKSFIK
                     WCVDQGLTVFVISWINPDQSLAQKGFADYMHEGPLEALDVISKVTGEDRVNAVGYCVG
                     GTLLAVTLAYMAAKRDDRIASAALLTAQVDFTHAGDLKVFAATEEQVAAVERQMAERG
                     YLEGSKMATAFNLLRANDLVWPYVVSNYLKGAAPLPFDLLYWNSDATRMPAANHSYYL
                     RNCYLDNNIAKGKVSIDNVRIDLKQIRIPIYNLATREDHIAPAKSVYVGSSFFGGPTR
                     YVLSGSGHIAGVINPPAKGKYQYWTGGAPRGEDLEEWICNATEHAGSWWPDWMAWLKS
                     HDAEEVEARAPGGGTFAPIEDAPGTYVKVRS"
BASE COUNT         3191 a         4870 c         4995 g         3018 t
ORIGIN      
        1 acggcgccga gaccgacctc gatcttggcc attacgagcg gttcacgggg cggccggcga
       61 cgcgccacga caacatcacc accggacgca tctaccagga cattctcgcc aaggaacggc
      121 gcggcgacta tctcggcgcc accatccagg tcatccctca cgtcaccaac gccatcaagg
      181 agttcatcct ccatggcaat gacaggttcg atttcgtgct ggtggagatc ggcggcacgg
      241 tcggcgatat cgaggggctg ccgtttttcg aagcgatccg tcagctcggc aatgagctgc
      301 cgcggcgcaa cgtcatctat attcacctca cgttgttgcc gttcattccg tccgcaggcg
      361 agctcaagac caaacccaca cagcattccg tcaaggaact gcgctcgatc ggcatccagc
      421 cggacatcct gctgtgccgt tccgaccggc cgatccccaa ggatgagaag cgtaagctgt
      481 cattgttctg caatgttcgc gaatccgctg tgatcgaggc gcacgacgtc gacaacatct
      541 atgcggtgcc cgaggcctat cacaccgccg gcctcgactc cgaggtgctg gcggcattcg
      601 ggattcatga ggcgccgccc gagcttgacc gttggcggat catcaatgag cgcatccgca
      661 acccggaagg cgccgtgacc attgcgatcg tcggcaagta cacgggcctc aaggatgcgt
      721 ataaatcgct gatcgaagcc ttatcccacg gcggcatcgc caacaaggtc aaggtcgatc
      781 tcgactggat cgaaagcgaa gtgttcgagc gcgaggaccc ggcgccgttc ctagagcatg
      841 ttaacggcat cctggtgccc ggtgggttcg gccaacgtgg cgccgagggg aagattcggg
      901 cagcccaatt cgcccgcgag cgtcacatgc cctatttcgg tatctgcttc ggcatgcaga
      961 tggcggtgat cgaggccgcg cgcaacctgt gcggcatcac caaggcgaac tccagcgagt
     1021 tcggcgcaac gtcggaaccg gttgtcggcc tgatgaccga atggctcaag ggcaacgaat
     1081 tgcagaagcg gggcgtcaac ggcgacctcg gcggcaccat gcggctcggc gcctatgcgg
     1141 cgctcttgga acgcggtagc cgcgtggcga atatttacgg cgcaatggac atttccgagc
     1201 gccaccgtca ccgctacgag gtcaacaccg gctaccgggc gcgactcgag cagcacggta
     1261 tgcgtttctc cggcatgtcg ccggacggaa tattgcccga aatcatcgaa tacaccgacc
     1321 atccgtggtt catcggcgtg caattccatc ccgagctgaa gtcccgccca ttcgagccgc
     1381 atccgctgtt cgcatcgttc gtcgaggccg cggtggtgca gagccgcttg gtgtaggtgg
     1441 gcttgccacc aggtgggcag gggccatctt cagtcgtgac tacgcgccgt cggccggtcc
     1501 gccttcgata gaggaaagac gcgataaatt gacagggtct ggggccgagc ggaagtagga
     1561 cgaaaacggt tgcgtggatg gttggagctt cagtcgatcc gcttggacaa ttccgtcttg
     1621 ggaccatgga taacggtcag ttcggacagt cttgccggaa cggcgccagc aaactgcact
     1681 cgcaggttaa tcgcccttga gaagaattct ccagcggcca aatggtgggc cggcaggcga
     1741 ataagcgctt attgaccaac gccgtgcacg ccgtcatggt ccactgcagg atgccatgat
     1801 gactgcacaa acaagccttc cacctaagcc catcgtcgct gcaggcacgg ttcggttcgg
     1861 caacgatctg ccgctagcgc tgatcgccgg gccgtgcgtg ctcgaaagcc gcggccacgc
     1921 gctcgatata gcgggcgcgc tcaaagagat tgccgggcgg attggcatcg gccttgtcta
     1981 caagacgtcc tttgacaaag cgaaccgcac cagcgcggcg agcgcgcgtg gtgtcgggct
     2041 cgaaggggcg cttgcggtgt tcgaggagat ccgcgccaag ctcggtcttc cggttctcac
     2101 cgatatccac gagagcggcc agtgcgccga ggtagcggcg gtcgtcgatg tgctgcaaat
     2161 cccggccttt ctgtgccgtc agaccgatct cttggttgcg gctgccagca ctggccgcag
     2221 catcaatgtc aaaaaagggc aatttctggc gccctgggac atggctcacg tggtggcgaa
     2281 gatcaccggc gccggcaatg cgaacgtgat ggtcactgag cgcggcgcct cgttcggcta
     2341 caacaccctg gtctccgata tgcgagccct accgatcctc gcccgcacgg gcgcgccggt
     2401 gatcttcgac gccacccatt cggtgcagca acccggcggg cgtggcgcgg cctccggcgg
     2461 cgagcgcgaa ttcgtcccgg tgttggcacg tgctgccgtc gcggtcgggg ttgcgggcgt
     2521 cttcatcgag acccatcagg acccggatcg cgcgccgtcg gacgggccca acatggtgcc
     2581 cctccaggat atggaagggc tggtgcggcg gctgatggcg ttcgatcggc tcgctaaaga
     2641 cacttccaat cgctcccccg tttggcgggg agggtagggt gggggctgct gccgcgagtc
     2701 cgtcccgagg agacgttctt taccctcccc gtctttttcg gggagggtgg cgcgacgcgt
     2761 cgggtggtat gacgccggca aagccttgcc ttggagcaac cccatcctgg cccttcacga
     2821 agacgggggg gaagaggaaa caccgcgtcc catgacctcg ccgtccgatc gcggcaccat
     2881 tccgggcgcg gtgcggcgcg ttctcgctat tacggcgctg tgcaatttcg cctccagcct
     2941 gttcatgcgc gcgatcgacc cgatgatccc gcaagtcgcc tacgacctcg cgatcgatcc
     3001 cgcgaccgct acgctgctga ccaccgcgtt cgcgttaccc tgtgccgcgc tgcagccggt
     3061 gctgggtccg ctcgccgaca tgatcggcaa gacgcggctg atgacgatct gcctcggcgt
     3121 gctggtaatc aatggcttcg tgggtgcagc ggctcccaat ttccaggtcc tgctggtgag
     3181 ccgggtggcg agcggcgttg cagtcggcgg aatattcccg agtgcgctcg caatcgccgg
     3241 cgatcttgtt ccagtccacc agcgtcaggt cgcgatcagt cgtctgctgg cggcgagtat
     3301 gctaggcagc ctgctcggca ccccgatggc cggcattgtc ggcgatctgg tgagctggcg
     3361 cggcgtgctt gcagtcatcg ggctcgtgtg cgtggccgcc ttcatcacga ctgtgatcgg
     3421 gttacgccgc gtcgcgctgc gacccggcat caccgtcaat cttgacgccg tcgtgacggg
     3481 ataccggacc attttccaaa atccccatgc caagatttgc tacggcgccg tgatgctgga
     3541 aggcactttc atgatgggga ttttccccta cgtggcgctg ctgctgcgtg aaaacggcga
     3601 gccacgcgcc gcgatcgcgg gcgtcgtcat cgcgggcttc gcactcggtg gagtgattta
     3661 ttcgttgacg gtgtcacgcc tgttggcgct gctcggcgag agcggcctca tgctcaccgg
     3721 cgcgggcttc atgagctgtg ccttgctggc ggttgccctg cgcgcgccat ggccggtcca
     3781 gatggccgaa ttcctgctcc ttggctgcgg cttctacatg atgcatggcg tcattcagat
     3841 ctatgctacg gagctggcgc ccgcagcgcg cggttcagcg gccgcccttc attccgcttc
     3901 cttctttctc ggccttgcga tcgggccggt ctatttcggc tatggtctcg cttatgccgg
     3961 gttgctgccg acagttgcgc tctcggcagc agtgatcctc ctcaccggct atgtgtgctc
     4021 caagacatta cggcccagcc ggccgcccac ggtctagaaa gcgcagaact cactcccgcg
     4081 cccgatatcc acgcacgccc tggtctggcg cccaggcgcc gcgcggcagc cgcccggcct
     4141 gccagaacac gtcgatcggc atgccgccgc gaggatggaa atagccgccg atgcgcagcc
     4201 agcgcggctt gagatggtcg aacaggcgct tgccaatacc aaccgtacaa tcttcatgga
     4261 acgccgcatg attgcggaag ctgttgagaa acagcttcaa tgatttcgac tcgatgagga
     4321 agcgatttgg cacgtagtcg atgaccacaa tggcgaaatc aggctggccg gtgaccgggc
     4381 acattgtggt gaattccgga aacgtgaatc gcgccacata gtcggtgtct ggatggggat
     4441 tcgacacgcg atcgagcacg gcctcgtccg gagaggccgg aatcttgctc ggctgtccaa
     4501 ggtggatggg cttgtgcggc atttttcgtg gcatggaaaa tcccaagaga gtcaggggga
     4561 aggcgcggga tcagcaaata ccgattgcgc ggtgcggcgt cacgcctgta tttcactaca
     4621 aaccaacagc cggagcctcc atgaccgcca ttgtcgatat catcggccgc gaaattctcg
     4681 acagtcgcgg caatccaacc gtcgaggttg acgtcgcgct ggaggacggc agccttggcc
     4741 gggcggcagt gccgtcgggt gcctccacgg gcgcccacga ggcggtcgag ctgcgcgacg
     4801 gcgacaagaa gcgctacgcc ggcaaggggg tgcgcaaggc ggtcgacgct gtcaatggcg
     4861 agattttcga tgctatcggc ggcatggatg ccgaagccca ggtcaagatc gacgagaccc
     4921 tgatcgccct cgacggcacg cccaacaagg cccggctcgg tgccaatgcg atcttgggcg
     4981 tctcgctcgc caccgccaag gcggccgcag cggcgcgcgg actgccgctc tatcgctatg
     5041 tgggcggggc gtcggcacgt actttgccgg tgccgatgat gaacatcgtc aacggcggtg
     5101 tccacgccga caatccgatc gatttccagg aattcatgat tatgccggtc ggtgccgaaa
     5161 atttcgccga aggcctccgc acgggcgtcg agatatttca gacgctcaaa aaggcgctac
     5221 gcgatgctgg ccataacacc aatgtcggcg acgaaggcgg cttcgccccc aaccttccgt
     5281 cggccgatgc tgcactgggc tttgtcatga aggccatcga ggcagccggc taccgaccgg
     5341 ccgaggacgt tgttctggct ctcgaccccg cgtcaacgga attcttcaag aatggcgcct
     5401 atcactacga aggcgaagga aaagtgcgaa cccgggacga gcaggtgaaa tatcttgccc
     5461 agctggtgca gcgctatccc atcgtgtcca ttgaggacgg catggcggag gatgattttg
     5521 acggctggaa agccctgacc gatgcgatcg gggcgcggtg ccagttggtc ggcgacgacc
     5581 tgttcgtcac gagtgtgcga cgtctcgccc acggtatcca gcgtgggctc ggcaactcga
     5641 ttctggtcaa ggtcaatcag atcggttcgc tcaccgaggc gctcgcggca gtcgagatgg
     5701 cccaaaaggc ggcctatagt tgcgtgatgt cgcaccgctc cggcgagacc gaagatgcca
     5761 ccattgcgga tctcgcggtt gcgacaaatt gtggacagat aaagactggt tcgctggccc
     5821 gctccgaccg cactgcaaaa tacaatcagc tcctgcgcat tgaacaggaa ctgggaccgc
     5881 aggcgcgtta tggcgggcgg gccgccgtga agggacttgc cgtcccccct tgattttgcg
     5941 ggaggaggtc cggcgggcaa cttttcttta ggatcatgcg ttagggccgc attaaccgca
     6001 ctggcagcac aaatccgaga tggttattcg tccgcgaatt cgcgcgtttt tgacggcgct
     6061 cggcctctat ctcgtggcgg cgctgttcat tggttatttc ggcgtcaacg cctacaccgg
     6121 aaaaaatggc atcaatgcgc gccaaggcct cgatcagcaa atcgccgact tggccggcga
     6181 ggtcgagcgt ctcaaggcgg agagagcccg atgggaacgc cgggtcgccc tacttaaggc
     6241 cgaccgcatc gatccggaca tactcgacga gcgcgcccga caggtcctca actatttgga
     6301 cccccatgat gtcaccataa tgattaagcg tcgttgaaag ttgctgtggg cggcgctttc
     6361 gccgccgttc gttttgagct atgggaaggc gaaccagctc ctgcccgagg attttaatgg
     6421 tgctcgccaa gaatagaaag ccggccgccg tgcctgccga gaaaagtcgt cccgacacga
     6481 gcaccagccg ccagccaggc gacgatgttc ccgatgtgcc gcctgggccc gacaaggagg
     6541 tcgaactccg cgcctatcgc gatatgctga tgatccgccg cttcgaggaa agagcgggcc
     6601 agatgtatgg catgggtctg atcggcggct tctgtcacct ttacatcggg caagaagccg
     6661 tggtggtggg catgcaactc gccctgcagc ccggcgatca ggtcatcacc ggataccgcg
     6721 atcacggaca tatgctcgca agcgggatgg acccgagggg ggtcatggcc gagctgaccg
     6781 gccggcgcag cggttattcc aagggcaagg gaggctcgat gcacatgttc agcgtcgagc
     6841 aaaatttcta cggcggtcac ggcattgtcg gcgcgcaggt ttcgctcggc accggtctcg
     6901 cctttgccaa tcgctaccgc caaaacggca atgtatgcct gacctatttc ggcgacggcg
     6961 cggcaaatca gggccaagcc tatgaaagct tcaacatggc ggagctgtgg aagcttcccg
     7021 tcgtctacat catcgagaac aaccgttatg ccatgggcac cgccgtgacc cgggcctccg
     7081 cccaggccga tttttccaag cgcggcctgt ccttcaacat cccgggcgag caggtcgacg
     7141 gcatggacgt tcgcgccgtc atggcggccg gcgagcgggc cgtacagtgg tgtcgtgacg
     7201 gtaacggccc catcattttg gagatgatga cttaccgcta ccgcggccac tccatgtcgg
     7261 atccggcaaa ataccgcacc cgcgaggagg tcgaaaagat ccgcgccgaa cgcgatccga
     7321 tcgagcaggt gcgcgtgcgt ctactcgcaa ccaagcgggc caatgaggac gaactcaagc
     7381 ggaccgacgc tgaggtgcgc aagatcgtta acgaggcggc tgaattcgcc acccatgagc
     7441 ccgagcccga tccggccgag ctttggaccg acgtggtgcg ctaaagcgat tcccgatatg
     7501 atggaaacaa gctctccttc gtcatacccg cgcagagaca ccccgccgcg tcacgcggcc
     7561 gggagcccgt cttcccggac acccacgtct ttcccaccgg gcatggacga cgaggacaag
     7621 ctcggccatg actcgaggaa atggctcaac gcaatcgaga aatgtttcaa cacctcaaaa
     7681 tagcaatttg cgagagccgc catgccgatt caggttttga tgcctgccct gtcgcccacc
     7741 atggaaaagg gcaaccttgc caagtgggtg aagggagagg gcgatcgcat cagatcaggc
     7801 gacatcatcg ctgagatcga aaccgacaag gctacaatgg aagttgaggc gaccgacgag
     7861 gggacattgg ggaagattct cgttcccgag ggcaccgccg atgttgcggt caacacgccg
     7921 attgccgtga tcctgtccga tggcgaggat accaaggcac tcaatggacc gggggccgct
     7981 tcggctgcac cgaaagcgga gggcgccatg gaaatgaaag gaccgctcaa agcgacattg
     8041 actaagattg cgccggccgt agccgcagcg tcgcatccag cgactgcgct tgaaacccag
     8101 cgggaccacg atgtgctgga ggacgccgaa atggtcacca tgacggtgcg cgaggcgttg
     8161 cgtgacgcta tggcggaaga aatgcgccgc gatcccgatg tgttcgtcat tggcgaggaa
     8221 gttgccgagt accagggcgc ctataaggtt acccagggcc tgctacagga attcggtgcg
     8281 gcgcgggtga tcgatacccc gatcaccgaa catggatttg ccggccttgg cgtcggtact
     8341 gcgttcgccg gcctcaagcc catcgtcgaa ttcatgacct tcaatttcgc catgcaggcg
     8401 atcgaccaac tcatcaactc cgccgccaag actctctaca tgtcgggtgg ccagatgaca
     8461 tgctccattg tgttccgcgg ccctaacgga ccggccgcgc gtgtcggcgc ccagcacagc
     8521 caagattttt cgtcgtggta cgcgcacgtg ccgggcctta cggtgatcgc gcctttcacc
     8581 gccgccgatg ctaaaggcct tctcaaatcc gccatccgtt accccaatcc agtggtgttt
     8641 ttggaaaacg aaattctcta cggccactcc tttgcggtgc caaagcttga cgactatctg
     8701 gtgccaatcg gcaaggcgcg gatcgcgcgg cccggcgaac acgtcaccat cgtatcgtgg
     8761 tcgatgggaa tgacttatgc cctcaaagcc agcgaggaac tcgaaaagga aaacatcagc
     8821 gcagagatca tcgacctgcg cacgctgcgg ccgatggaca ccgcgaccat tgtccgatcc
     8881 gtcgaaaaga ccgggcgctg cgtggtcgta gaggagggct ggcagcaatc gggcatcggc
     8941 gccgagatcg cagcacgctt gatggagcag gccttcgact atcttgatgc tccagtcatg
     9001 cgcgtatcgg gtaaggatgt tccgatgcct tacgcggcaa acctggaaaa gctggcgctg
     9061 ccttcggctg ccgaggtggt cgcggctgtg aaggcggttt gctaccgttg atccaacagg
     9121 ccgacgatgg gcgcgttcgc ccgtgaacgg ccaaatgaac gccggaggat caacatgttt
     9181 tggctcgcaa cagtattttt tgccgcagtc gcgtggcttc ttaccggggc ggggccagcc
     9241 acggcctatc cggaacgccc cgtcaccatt gtggtgccct tcgccgcggg cggcccgaca
     9301 gacgtcatcg cccgcatcat ctctgatcat tggtcgcgtg cgctcggtca acagttcgtg
     9361 atcgaaaatg tcaccggcgc cggcggaacc gtcggcgcga cgcgggtgaa gcgagcggca
     9421 tccgacggct acacgctgtt gctgggtaat ctcggcaccc aggcggcgag cgtcgggctt
     9481 tatcccaatc tcgcctacga tccccgaacg gatttcgaat tcattctcaa cgtggccgca
     9541 acccctctgc tggtggtggc caagaacgat cttccggtcg aagatttccg cgatttcata
     9601 gcctacatga aggccaacga aggaaaactg aattacggca ccggcggcgt gggagcgacc
     9661 tctcatctcg cctgcctgtt cctcgatcac ctgcttggca ccaagaccac ccacgtgccc
     9721 tatcgaggtt cggggccagc cttgcaggca ttgatcggcg gacagatcga ctatgtctgc
     9781 gaccagacgg tcggcattgt accgtcaatc cagggccgcc tcgtcaaagc cctcgtcatc
     9841 gcgtcgcacg agcgtagccc agtgctgccc aacgtgccga catccgtcga gcagggcttg
     9901 gccgattttc gaaccaccgg ctggaatgtg atgctggccc caaagggcac gtccaatgta
     9961 atcgtcgatc aactcaacgg cgctggcagg gctgcgctca aagacgaggt cgtgcgcaag
    10021 cgcctgcttg agctcggtgc cgacctgccg gccgaatcgg agcagacgcg gacgagcgct
    10081 gctgaactgg tgcgcgccga aatcgagaaa tgggtcccca tcatcaaggc ggccggcgtg
    10141 gtggtgaact gagaaccgcg atggcgctaa tccgtgacca cgaaatctat gacgcgctgc
    10201 tgatctccgg cgaagccctg gataaggggg ggatcgagat tttgcgcgcc ggcatcgtgg
    10261 atgaaaaact gttaatcact gcgcggcgtg tgttcgcgga cccggcgcat tggggctatg
    10321 tgctggccga cattgcgcgt cggctggcag cgctttacgg ggcggaaact gcgttcaccg
    10381 aggccaaggt gagtggcgcg atcgcgggtg cgttcgcgaa atcgtttcgc cctacggcga
    10441 cggggttgac gcgaaagccc gtccagcgcc agccggccaa atctgcagga ccgcccgcaa
    10501 aagcgcgggc taagtccaaa ccctccacca aagccgtgcg tcgcaagggc gcacgggcca
    10561 aaccgtgagg cgggccgatg ccaatcaaca ttcttatgcc cgcgctgtct cccaccatgg
    10621 agaagggcaa ccttgccaag tggctcaaga aggagggcga caaggtcaag gccggcgacg
    10681 ttttggccga gatcgagacc gacaaggcca ccatggaata tgaagcaatc gaggatggtg
    10741 tactcgcgaa aatcctggtc caggaaggca ccgcggatgt tgccgtcaat gagcccattg
    10801 cggtgttggc ggccgaaggt gaagacttaa aggcggttgt ggcgccgagc gcttccgcca
    10861 ccaaacccgc cgtaccaagt gagccccacc cggcgccttc ggcctccccg aagacgggga
    10921 gggatgaagc gccgcaaaag tcccaaaatc cctcctcgtc ttcggggagg acagcgagcc
    10981 tcagcgagcc gggtgcggcg cctgctacca atggccacgc cggccgtatc ttcgcgtcgc
    11041 cgctcgcccg ccgcctcgcc aaggcggccg gcattgacgt cgtccgcatt gccggtaccg
    11101 gcccgcacgg gcgcattgtg gcgcgggatg tggaagcggc aatgcccgac ggcgcagccc
    11161 tgcgcgcgcc cgtaccgcag cggccagcac ctcagccgcc cgttgtggcg ccggtgcagc
    11221 cgcccgcgga cgacaacaag attcgcgccc tatttgagcc cggctcctac gaagtcgtcc
    11281 ctcatgacaa catgcgcaag atcatcgccc agcgcttggt gttggcgaaa cagacgatcc
    11341 cgcatttcta tctcaccatc tcctgcaccc tcgacaagct gttgtccgcg cgcgaggaca
    11401 tcaacgtgac ggcgccgaaa ggtgcggacg gtaagccggc gtggaagctt tccgtcaacg
    11461 acttcgtgat caaagctctg gcgctagcgc tcatcaaggt tccgcaagcc aatgtcactt
    11521 ggaccgagac tggcatgctc aagcacaagc gcgctgacat cggcgtcgcg gtcgcgatcc
    11581 ccggtggact aatcacacca gtgatccgca aggccgaaac caagtcgctg attgcgatct
    11641 cggcggagat gaaggattat gccgcccgcg cgcgggcgcg aaagctcaag cctgaggaat
    11701 accagggcgg ctcgtcggcg atctccaatc tcggcatgta cggcatcgag gaatttgccg
    11761 ccgtcattaa tccgccccac gccaccatcc tggcggtcgg tgccggcgtt gagaacgccg
    11821 tggttcgcga cggcaaactc gccatcgcca cccaaatgaa agtgacgcta tcgactgatc
    11881 accgcgccgt cgacggtgcg ctgggtgcag agctgattgg ggcgttcaag acctacatcg
    11941 agagcccaac cgcaatgctg gtgtgaacgg ttgattcata cacctagaaa cttgacgcca
    12001 ttgaaggcca ccttacttat cagcttggta tcagctcgcg catcgtcgcg gacgttgaag
    12061 cgcttgaaag tgatatctgc gaaatcaaga agcggggtgt tggagcagca actccggccg
    12121 cggtcagatc aattcaattc cctcctcggg ggcagcgttg ggggcgtccg acgccgggcg
    12181 acgacaagta gatagacgaa gcatgcagat tctcgcgcgc ccgcgcggcg acgtcgctgt
    12241 gtgcctgcga atcccatagc gcacagcgcg accaagggag atcaaagtgg cggaatcctt
    12301 cgatattatc atcatcggat cgggccccgg cggctacgtg acggcgatcc gggcagcgca
    12361 gcttggcttg aagactgcga tcgtcgagcg cgcttacctc ggcggcatct gtctcaactg
    12421 gggttgcatc ccaaccaagg cgctgctgcg ttcggcggaa atcttccact atatgcagca
    12481 cgccaaggac tacgggctag cggccgaaaa ggtctcctac gacgcggccg ccatggtcaa
    12541 acgttcgcgc ggcgtgtcga aacgcctcaa tgacggcgtc ggcttcctga tgaagaagaa
    12601 caaggtatca gtgatctggg gtgaggctgc aattgacgcg cccggtaagg tcaccgtcaa
    12661 gcccgtcaag accgaagccc cgaagggtgc cctcgggccg ggcgcgtatc aggcaaaaca
    12721 catcatcatc gccaccgggg cacggccgcg tgtgctgcct ggcatcgaac cggaccaaaa
    12781 gctggtgtgg acttatttcg aggcgatggt cccggagcgc atgccgaagt cactgctggt
    12841 gatcggctcc ggcgcgatcg gcatcgagtt cgcctcgttc taccgggcgt tcggggcaga
    12901 cgtgacggtg gttgaggtgc tgccgcaaat tcttccggtg gaggacgccg agatcgcggc
    12961 cttcgctcgc aaggcattcg agaagcaggg gatcaagata ttcaccggtg ccaaagtgag
    13021 tcgactcgac aaaaagtccg atagcgttac ggcgaccatc gacgacggca aaggtgggac
    13081 gcaaacgctc gccgtcgatc gcgtcatttc ggcgatcggc gtcaccggca atgtggaaaa
    13141 tcttggtctt gaacggcttg gcgtcaaaat cgaccgcggc agcatcgcga ttgacggtta
    13201 tggccgtacc aatgttcctg gcatccatgc catcggcgac gtcgccggtc cgccgatgct
    13261 ggcgcacaaa gccgagcatg aaggcgttgt ctgcgtcgag gccattaagg gcctcaagcc
    13321 acatcccatg gacaagctga agattcccgg ctgcacctat tgcgcgccgc agatcgcatc
    13381 ggtcggtctc accgaagccg ccgcgaaaga gaaaaagctc gacatccggg tcggccgctt
    13441 cccgttcatc ggcaacggca aggcgatcgc gctcggcgaa gaccaaggtt tagtcaaggt
    13501 gatcttcgac aaggccactg gccagcttat cggtgcccac atgatcgggg ccgaggtgac
    13561 cgaactgatt cagggctatg tggtggcgat gaacctggaa accaccgagg aagaactgat
    13621 gcatactgtc ttcccgcatc cgacgctgtc ggaaatgatg aaggaggcag tgctcgacgc
    13681 ctatgggcga gtgttgaata tgtagcgctc gtctcgcggt ctgataggtc atcgccaggc
    13741 ccaacgacct cgatcggaag ggtatccccg attatcggga tggccgcgac aacaaactcg
    13801 gccatggcca agagtagcca cgtgatcaag ggacgtcgac gtctcgcttg agcgcaacga
    13861 tatcaatccc gcgcaggtat cgaggaatat tgatccacat atcatgaaag ccgaagtcgc
    13921 cgttttgcat ttcgtccaga gcagcatcct tgctccagcc ttgatagaca atgcgatata
    13981 aagcggtgat cagcccggtg cggtcggcgc cgtgcttaca gtggagcaat gtcggatcat
    14041 gttgcgtggc aagccgcagt gcgcgcaagg cgccgacgac atcctcccgt tcgatgtgcc
    14101 aagtgtgcat tgggaaatca tacaagcgca gcgacaaacc tttggtgaga ggcttgtctg
    14161 agtgaaaagc ccgcagactc acgacggtgc gtataccgta acgcttgtta agctgcgcaa
    14221 agccttgcgc atcgggttga gcgctgcggt aaaaattcgg cgctacctgg tgaagattgg
    14281 gtacgcctgc aagcgaaagc ggtacggccc attcggaatg ctgttgtggc tggattttct
    14341 gcgccatgct gggctgagcc aacatgaaag gccaacagaa atcggcaaag accaccaatg
    14401 ggatgaaata cgctctcttc atctgcgtcc ccagtgcagc gcgacttaga ccgcataaaa
    14461 tggaattacg agcatgtggt cgcgccccgc gaaggcgggc gatccagtaa ccacgtggtt
    14521 tcgatttggg catatgcccc tggtgtcggg gatactggat gcgccgtttt ggggggcctg
    14581 acaacgcgtg atttaaccgt tccgggtggc tcggtggcgc agagcgcctt aactgcgcac
    14641 cttgacgtag gtccccggcg cgtcttcgat gggggcgaac gtgcccccgc ccggagcgcg
    14701 cgcttcgacc tcctcagcgt cgtgcgactt gagccaggcc atccaatccg gccaccacga
    14761 tcccgcatgt tcggtcgcat tacagatcca ttcttcgaga tcctcgcccc gcggcgcgcc
    14821 gccggtccag tactgatatt ttcccttggc aggcggattg atcacgcccg cgatatggcc
    14881 cgaccccgac agtacatacc gcgtcggccc gccgaagaac gatgagccga catacacaga
    14941 tttggccggt gcgatgtggt cctcgcgcgt ggcaagattg tagatcggaa ttcggatttg
    15001 cttaagatca atcctgacgt tgtcgatgct cactttgccc ttggcgatgt tgttgtccag
    15061 atagcagttg cgcaaataat acgaatgatt ggccgccggc atacgcgtcg cgtcggaatt
    15121 ccagtacagg agatcgaacg gcaacggtgc tgcgcccttg agatagttgc tcacgacata
    15181 gggccagacc agatcgttgg cgcgcaacaa gttgaacgcg gtcgccatct tggagccttc
    15241 gagatagccc cgctcggcca tctggcgctc gaccgccgcg acctgctcct cggtcgcggc
    15301 gaatactttc aggtcgcccg catgagtgaa gtcgacctgg gcggtgagaa gcgccgccga
    15361 agcgatgcga tcgtcccgct tagccgccat gtaggcgagc gtgacggcga gcaatgtccc
    15421 gccgacgcaa tagccgaccg cgttgacccg gtcctcgccg gtgaccttgc ttatgacatc
    15481 gagcgcttcg agtggacctt cgtgcatgta gtcggcaaag cccttctggg cgagactctg
    15541 atccgggtta atccatgaaa tgacgaacac cgtcagccct tggtcgacgc accatttgat
    15601 gaaggacttc gccggcgtca ggtcaaggac ataatacttg ttgatccagg gcggcacgat
    15661 gaggagcggt cgcttcagca cgcgcgcggt cgatggcgaa tattggatga gctgcatcag
    15721 ggcgttctgg tagatcactt tgccgggcgt gatcgcgaga ttgcggccga cctcgaattt
    15781 cgacatgtcg gattgccgga ttctcaatcc tccgccaccc gcctcgatgt cctcggcgaa
    15841 catctgggcg ccgcggacga gattctcggc gctctcggct aaggtgacgc gcagcagctc
    15901 cgggttggtg acgataaaat tcgacggcga tagtgcattc acgatctgac gcacatagaa
    15961 gtctgccttc tgacgcacgg ccggatcaag ttggttggcg tgctcgatga ggtatttcgc
    16021 ccaatcggcg atgatcagat aggcctgttt gagaaaatcg aaatattgat tcga
//
LOCUS       DATILV010000369         2998 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2643298, whole genome shotgun sequence.
ACCESSION   DATILV010000369 DATILV010000000
VERSION     DATILV010000369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2998)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2998)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2998
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2643298"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2144
                     /locus_tag="VLJ17_08355"
     CDS             <1..2144
                     /locus_tag="VLJ17_08355"
                     /EC_number="7.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009451646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015662 - P-type ion transporter activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0019829 - ATPase-coupled monoatomic cation
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HSV23026.1"
                     /translation="CGACIRAVEMALGALAGVESARVNLSTRRVTVRWRSKGPPPPFV
                     ETLQQAGFEAHLFDVGSDDKDGALSELIRALAVAGFASSNIMLLSVSIWSGAEAEARD
                     LFHWLSAIIALPTLAYSGRIFFRSAWQALKRRRTNMDVPISIGVLLAFGMSLYETAQH
                     GSHAYFDASVSLLFFLLIGRTLDYMMRERARSAVKGLVRLVARGARVVRADGTQVYLP
                     ISEIQGGMIVMLAVGERVPVDARVIKGTSELDVSLISGENVAVPVTVGSELRAGTLNL
                     TGPLTIVATATANDSFLGEMMRMMEAAEQGRSAYRRIADRAAGLYAPVVHLTAFLTFA
                     GWLVATGDMHCAVTIAIAVLIITCPCALGLAVPMVQVVAARQLFENGIMVKDGGGLER
                     LAEIDTVVFDKTGTLTLGLPRLLGTGSMDRETFAIAAAMASYSRHPYSRALVEAVATL
                     APAGVVFDEVSEHPGLGLEAISGAIVYRLGRPEWALAGLDNGGRKLGDGSLVLSRDGG
                     RLAEFRFEDFPRADTSTVVAQLKQAGMLVQVVSGDRDAAVRPIAQRLDVPYFAAVLPA
                     GKIEHIAALEASGRKVLMVGDGLNDTPALAAAHASMAPASAADVGRSAADFVFLRESL
                     SAVPQAISVARGAGRLVRQNLALAVAYNVVAVPVAIMGYATPLVAAVAMSGSSILVVA
                     NALRLKQGERIGLHGAANVQLSSATVLEASE"
     gene            2141..2314
                     /gene="ccoS"
                     /locus_tag="VLJ17_08360"
     CDS             2141..2314
                     /gene="ccoS"
                     /locus_tag="VLJ17_08360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015596748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008535 - respiratory chain complex IV
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HSV23027.1"
                     /translation="MRDYFYLIPIAFGIGLSALAAFMWSLKAGQYDDLEGAAERILHE
                     ETDTPIRTTPPAR"
     gene            2899..2998
                     /locus_tag="VLJ17_08365"
                     /pseudo
     CDS             2899..2998
                     /locus_tag="VLJ17_08365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003537131.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
BASE COUNT          537 a          858 c          950 g          653 t
ORIGIN      
        1 attgcggcgc atgtattcgg gcagtcgaaa tggcgctcgg cgcgcttgcc ggtgtggaaa
       61 gcgcacgcgt caatctctcg accagacgcg tgaccgtcag gtggcgctcg aaggggcctc
      121 cgccgccgtt cgtcgaaacg ctccaacagg ccggcttcga ggcacatttg tttgatgtcg
      181 ggtcggacga caaggatggc gcgctctccg aactgatacg cgctctcgct gtcgcgggct
      241 ttgcctcgag caacatcatg cttctctcag tatctatttg gtcgggggct gaagcggagg
      301 cccgcgatct gtttcattgg ctgtccgcga tcattgcgct gcctacgctg gcgtattcgg
      361 gtcggatatt tttccgttcg gcatggcaag ctctgaagcg tcgacgcacg aatatggatg
      421 tgccgatctc gatcggcgta ttgcttgcct tcggaatgag cctttacgag acggcgcagc
      481 atgggtcgca cgcctatttc gatgcctcag tctcgctgct gttcttcttg ctgatcgggc
      541 gtacactcga ttacatgatg cgcgagcggg cccggtcggc cgtgaagggg ctggtgcgac
      601 tcgtggcacg tggggcacgc gtggtgcggg ccgacggcac gcaggtttat cttccgataa
      661 gcgaaatcca aggtggaatg atagtcatgc tggctgtcgg cgaacgcgtc ccggtagacg
      721 caagagtgat caaaggcacg tccgaactgg acgtctcgct gatttcagga gagaacgtag
      781 ctgtgccggt gactgtggga tccgagctgc gtgcaggtac gttgaatttg accgggcctc
      841 tgaccatcgt ggccacggcc acagcgaacg attccttcct cggcgaaatg atgcgaatga
      901 tggaggctgc cgagcaaggc cgctcggcct atcggcgcat tgcggaccgc gccgccggcc
      961 tgtatgcgcc cgtggttcat ctcaccgcgt tcctgacgtt tgctggctgg ctcgtcgcca
     1021 ccggcgacat gcattgtgcg gtgaccattg ccattgcggt tctcatcatc acctgtccgt
     1081 gtgcgctcgg acttgcggta cctatggtac aggtcgtcgc cgcccgacag ctattcgaga
     1141 acggcattat ggtgaaggac ggtggcggtc ttgagcgcct cgccgaaatc gacacggtgg
     1201 tcttcgacaa gacgggaacg ctcacgcttg gtcttccccg tcttctcggg acgggtagca
     1261 tggaccgaga gacattcgcg attgcggctg caatggcttc ctattcccgt cacccctatt
     1321 cgcgcgcgct cgttgaggcg gttgccactc ttgctccggc tggtgtcgta ttcgatgagg
     1381 tatccgagca tcctggcctc gggcttgagg cgatctccgg tgcgatcgtt taccggctcg
     1441 gccgaccgga atgggccctc gcgggtctgg acaacggcgg gcgcaagttg ggggatgggt
     1501 ccctcgtgct ttccagggac ggaggccgtt tggccgagtt tcgctttgag gactttccgc
     1561 gagcggatac ctcgacggtg gttgctcaac tgaagcaagc cggcatgctg gtccaggtgg
     1621 tctccggtga tcgtgacgcc gcggtaaggc caattgcaca acgactggac gtgccttact
     1681 ttgcagccgt attgcccgcc ggaaagatcg agcacattgc ggcgcttgaa gcgtcaggcc
     1741 gaaaggtcct gatggttggt gacggcttga acgatacgcc ggcgctggcg gcagcgcatg
     1801 catcgatggc gccggcctca gcggcggacg tcggccgcag cgctgccgat tttgtgttct
     1861 tacgcgaaag cctgtccgca gtgccccagg caatctcagt cgcccggggc gctggcagac
     1921 tggtgcggca gaaccttgct ctcgctgtcg cctataatgt cgtcgcggtt cccgtcgcaa
     1981 tcatgggcta tgcgacgccg ctggtggccg ctgtggcgat gtcgggatca tccattcttg
     2041 ttgtagcaaa tgcgctccgc ctcaagcagg gagaaaggat cgggctacat ggtgccgcaa
     2101 acgtacaact ttccagcgcg acagttttgg aggcttccga atgagggact atttctacct
     2161 gataccgatc gcattcggca tcgggctctc cgcgctcgca gctttcatgt ggtcgctcaa
     2221 ggccgggcag tacgacgatc ttgaaggggc tgccgagcgg attctgcatg aagagaccga
     2281 cacgccgatc cggacaacac cacctgcgcg atgaggccga tccccccaac tgctaagggc
     2341 ggaaattaag cgtccctcgc tatgatcttt ctagctgcag gggcaacggc gcaggcacgg
     2401 cctgcgtccg cggttggtga aatggggcat acgtctgccg ctgaagtaga cggttgtcgc
     2461 gctccaaagc cttagagcgg tcctctatgc ctcggcaacc aattcttgtc gtgagaggct
     2521 tcatcagcat caacggcgag aagttaccgt gccgccactt cggctgacaa tgcctgacgt
     2581 ctggcccgcc caccctgcta ctaggggtat ccgcagatcg gatggacgta tttcacaatg
     2641 atgtccgcgt ttggcagata ctgttgaaaa agtcttctgg ggtgatgaac gaaaattcta
     2701 aggaccggcg gtgctttttc acagcgacgt gagggaccac atcgactctc agaaaaacga
     2761 ccacagagct tcgtatccgc gatacagagc attgcagcgg cggagtcgtc tgagaatctg
     2821 cttttgcgag atattcggcg attccgatcc ggaggcgatt tcagtttacg tgcggtcaaa
     2881 ggccccggat gcagtagcat cggactcgag actggaccga cgtccacgcg gctgtggacc
     2941 gagcttaagc gacttggcct gccggtgatt tgcatcgacg cgcgccacgc caaggccg
//
LOCUS       DATILV010000370         1649 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1108138, whole genome shotgun sequence.
ACCESSION   DATILV010000370 DATILV010000000
VERSION     DATILV010000370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1649
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1108138"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            675..>1649
                     /locus_tag="VLJ17_08370"
     CDS             675..>1649
                     /locus_tag="VLJ17_08370"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HSV23028.1"
                     /translation="MKWGSDVVAEVTRRLNLKYIALVPGASYRGCHDSIVNYLGNSNP
                     QMVICLHEEHAVAIADGYGKVSEQPMAVALHSNVGLMHASMPIFNAWCDRTPMVIFGA
                     TGPVDAHRRRPWIDWIHTSKDQASLIRNYTKWDDQPASPQAAVESVLRANQITRSAPY
                     GPVYICLDAGLQESSLAEEISIPDPARFAPAPSPAAPRSSVLNVLKAIDKAKFPLILM
                     GRVSRKQADWDRRVRFAEAIGAAVLTSSNDPAAFPTTHPLHFAAPCLRPSKDATVLIE
                     KADLVISLDWLDLAGVLRLGLGTAQTQKPADKTIIHCSVDSIRTNGWSM"
BASE COUNT          401 a          483 c          443 g          322 t
ORIGIN      
        1 agtgagacct gtgaggagaa acaaccattg gttcgggtta cgcatcatca tcgcaaacat
       61 acgcttggcc ctcacgtagc taagattttc cagctcctaa atctgcgtct ctagctgccc
      121 gcaaacaagc cgcctgaaac caattacccg tcgcatgcta tatatcaaat ccatctatca
      181 agacaattag caaaacaaat agaataataa actctatgga ttcccaaagt ttcttcatta
      241 cctcgggatg ccgcttcatt gaagtgccat cgcgagccct ctcgctgaat cgcgctctga
      301 agagccgata ccacagcccg gacggtggtc gcaagaacgg tgcaaaccat gcaattgaaa
      361 caaccccgtc gccctatgca aagcgcataa gtcatgcgct cgcaatggtt cgtattgact
      421 tatcagcagc ttctcttcta gagtttcacg gtgccgcgaa aacgcagggt agatatgccg
      481 aatcagtgga cgcacgagcc aaggaatcta ctccgaaacg acgagaactc gtcgtggcca
      541 agccagaccg cataacgaga tcaaaggggg agtacacggt gaaaacaacc catgccagga
      601 aagcgatcga aacgaacaat cggcaatcca aaaaggcccg gattgatcgg ccggaaaatt
      661 tgggaaaacc acaaatgaag tgggggagcg acgtcgttgc cgaggtaact cgaagactca
      721 acctcaaata catcgctcta gtgcccggcg ccagctatcg cggctgtcac gacagcatcg
      781 tcaactatct gggcaacagc aatccgcaaa tggtcatctg cctgcatgaa gagcatgcgg
      841 ttgcgattgc cgatggctac ggcaaggtgt ccgagcagcc gatggccgtg gcattgcact
      901 ccaacgtcgg gttaatgcat gcgagcatgc cgatcttcaa cgcgtggtgt gaccgaacac
      961 cgatggtcat cttcggcgcc accggccccg tggatgcgca taggcgccgt ccctggatcg
     1021 actggatcca tacatccaag gatcaagcgt ccctgattcg caattacacc aagtgggatg
     1081 atcagccggc ctcgcctcaa gcggcggtgg agtcggtgct gcgggctaat cagatcacgc
     1141 gcagtgcgcc ctatggcccg gtatacattt gcctcgacgc cggtctgcag gagtcgtcgc
     1201 ttgcggagga aatttcgatt cccgatccgg cacgcttcgc gccggcgccc tctcccgcgg
     1261 caccgcgttc ttctgtgctg aacgttctga aagccatcga caaggcgaag ttcccgctga
     1321 tcctgatggg ccgcgtttcg cgcaagcagg cggactggga tcggcgcgtc aggtttgccg
     1381 aggcgatcgg cgccgcggtg ttgaccagca gcaacgatcc agcggcattc ccgacgaccc
     1441 atccgctcca cttcgccgcg ccgtgcttgc gcccgagcaa agatgcgaca gtcttaatcg
     1501 aaaaggcgga cctcgtcata agccttgatt ggctggatct cgccggcgta ttgcgcctgg
     1561 gtctcggcac cgcgcaaaca cagaagcccg cggacaagac gatcatccat tgttcggttg
     1621 atagcattcg taccaacgga tggagcatg
//
LOCUS       DATILV010000371         2599 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4173937, whole genome shotgun sequence.
ACCESSION   DATILV010000371 DATILV010000000
VERSION     DATILV010000371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2599)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2599)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2599
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4173937"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            265..609
                     /locus_tag="VLJ17_08375"
     CDS             265..609
                     /locus_tag="VLJ17_08375"
                     /inference="COORDINATES: protein motif:HMM:NF042840.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6788 family protein"
                     /protein_id="HSV23029.1"
                     /translation="MIRDRTLQARNKLIGKLPVSGELLRGSLLERTVRHTKGCPKCAR
                     GEGHQVFVLTVTYAGGRTQQFSVRRERIAEVRRWLDNYQQLKQAIEDICELNHELLRP
                     ELHRRRAGRRHD"
     gene            611..2017
                     /locus_tag="VLJ17_08380"
     CDS             611..2017
                     /locus_tag="VLJ17_08380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_057901383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISNCY family transposase"
                     /protein_id="HSV23030.1"
                     /translation="MRRAQLSFGDGLITEDVSDLREDWMAYADRVLADDDIVTTVYDA
                     LAKRHPKSRSRGRLGTPAEVVLRLLVLKHIRNLSYAALEREVRANLVYRDFTPVGSGK
                     MPDAKTMGRWGLAIGPQVLRQIHDRMVKIAHDNGVVAGRRMRVDTTVVESNIHHPTDS
                     TLLGDGVRVLTRTMKKITDIVGAVGTKLRDRSRSVKLRLFEIARIARAKGPLNRDRLQ
                     QRYRRLLDTTSRVVGQAKRFSKEISDGVKGAADVLQQITLEGLRENLDRMIPLVRLVM
                     HQTRARIFHGDTHVEGKILSVFEPSTEVIRKGKVGKPNEFGKMIKLQETENQIIVDYE
                     VYARRPNDSDLLIPSIAAHQAKLGRVPRLVATDAGFYSARNEAAAKAMGVKRVCIPNR
                     SSKSIERKREQKKRWFRNGQKWRTGCEGRISVVKRRNGLDRCRYKGDDGMQRWVGLGV
                     ISDNLVNIGRAMGKQAAP"
     gene            complement(2224..2403)
                     /locus_tag="VLJ17_08385"
     CDS             complement(2224..2403)
                     /locus_tag="VLJ17_08385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23031.1"
                     /translation="MAKAELFRLATAALNQPINSVADRKNGETRASDRPRRTKRFLLI
                     IALLFAIAVAVLGVG"
BASE COUNT          559 a          731 c          809 g          500 t
ORIGIN      
        1 cttatatcga ttgcatcctc ccgatggcca aaactgacct ttattggact tgggacctgc
       61 gctgcattca tgtttgcgtt tgagccaaag cggccgacag tcatcacacc attcgatgtg
      121 aagcgagtgt gtctcttaga ctacttcctg gcgcaaaatt cgaaggcctt tggccgcgtg
      181 tagaatcagc gcgtcggcgg aaaactgcaa ggtcgaacgg agcgacgctt gacttgcgcg
      241 gttgcaattg attcattttt atagatgatt cgcgatcgaa cccttcaggc gcgcaacaag
      301 ctcatcggca agctgccggt tagcggcgaa ttgctgcgtg ggtcgttgtt ggagcgcact
      361 gtccggcaca ccaagggctg cccgaaatgc gcgcgcggcg aagggcatca ggtcttcgtg
      421 ctgaccgtga cttacgctgg cgggcgcacg caacagttca gcgtgcgtcg cgagcggatc
      481 gccgaggtcc gccgctggct cgacaattat cagcagttga agcaggcgat cgaggacatc
      541 tgcgagctca accatgaact cctgcgtccg gagctgcatc gaaggcgcgc ggggcgacgg
      601 catgattgag atgcggcgag cgcagttaag cttcggcgac gggttaatca ctgaggatgt
      661 gagcgatctg cgcgaagact ggatggcgta tgccgatcgg gtgctggcgg acgacgacat
      721 cgtgacgacg gtctacgacg cgctggcaaa gcggcatccc aagagccgca gccgcggcag
      781 gctcggcacg ccggccgagg tggtgttacg tctgctggtc ctcaagcaca tccggaacct
      841 gagctatgcc gccttggaac gcgaggtgcg cgccaacctc gtgtaccgcg acttcacccc
      901 agtgggcagc gggaagatgc cagatgccaa gactatgggg cgatggggtt tggcgatcgg
      961 gccgcaggtg ctcaggcaga tccatgatcg gatggtgaaa atagcgcatg acaacggcgt
     1021 cgttgcgggc cggcgcatgc gcgttgatac caccgtagtg gagagcaaca tccaccatcc
     1081 gaccgacagt acgttgctgg gggatggcgt tcgggtgctg acccgcacca tgaagaagat
     1141 cacggatatc gtgggtgcgg tcgggaccaa gctgcgtgac cgcagccgga gcgtgaagct
     1201 gcgcctgttc gagatcgcgc ggatagcgcg tgccaaaggc ccgctcaatc gggaccggtt
     1261 gcagcagcgg tatcgccgct tgctcgatac cacgagccgg gtcgtgggac aggcaaagcg
     1321 gttctcgaag gagatatccg acggagtaaa gggggccgcg gatgtcctgc agcagatcac
     1381 cctggaggga ctgcgcgaga acctcgaccg gatgataccg ctggtgcggc tggtcatgca
     1441 ccaaacccgc gcgcgcatct tccatggcga cacccacgtc gaaggcaaga ttctcagcgt
     1501 gttcgagccg tcgaccgagg tcattcgcaa gggcaaggtc ggaaagccca acgagttcgg
     1561 caagatgatc aagctgcaag agaccgaaaa tcagatcatc gtcgactacg aagtctatgc
     1621 tcggcgaccc aacgattccg atctgttgat cccatcaatt gcagcccacc aagcgaagct
     1681 ggggcgtgtt ccgcgactgg tggcgactga cgccgggttc tattccgcca gaaacgaggc
     1741 cgctgcgaaa gccatggggg tcaaacgtgt gtgtattcct aatcgatcga gcaagagcat
     1801 cgaacgcaaa cgcgagcaga agaaacgctg gttccgcaac ggccagaaat ggcgtaccgg
     1861 atgcgaaggg cgcatcagtg tggtcaagcg gcgaaacggt ctcgatcgtt gccgatacaa
     1921 gggcgacgac ggaatgcagc ggtgggtcgg gctcggcgtg atctccgaca atcttgtcaa
     1981 catcggacgg gcgatgggca aacaagctgc cccttaagtt ctcgcaatca tcatcgcgct
     2041 cttcacagcc ccgccgccca ccccggcggg ttttgctttg ctccacgccg ttgaccaaag
     2101 gctcgaaaac atcaattttg cgccgggaag tagtctaacc cctttgcatt ttactcgaat
     2161 ttcaaatgga ttacctctcg tggattaacg ctgtcgggtg ccgtgatatt cggcaccccc
     2221 aatttagcca acgcccaaaa ctgcgacggc aattgcaaac agcagggcaa taatcaacag
     2281 aaaacgcttg gtgcgccggg gcctatcgct ggcgcgggtc tccccgttct tgcggtcggc
     2341 tacggagttt attggctgat taagcgccgc cgtcgcaagg cggaatagtt cggctttcgc
     2401 caactgcgga cgtgccgtcg cacacgtccg ggacagctat ttgccaacac ccgaagtccg
     2461 gcgttcttat tcgatcaccc gcatcggctc gcgcgaccag accgaaaggt atttcgaggc
     2521 ctaggcctct ttgcggtctt taggttgact accaactcga agcgggaccg gagaatttgg
     2581 gaaatgctat tgttcctgg
//
LOCUS       DATILV010000372         2276 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3665386, whole genome shotgun sequence.
ACCESSION   DATILV010000372 DATILV010000000
VERSION     DATILV010000372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2276)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2276)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2276
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3665386"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(299..1831)
                     /locus_tag="VLJ17_08390"
     CDS             complement(299..1831)
                     /locus_tag="VLJ17_08390"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HSV23032.1"
                     /translation="MTAWKPAQQTDTAFQGRPMEHPFSLHPIRPRPLATKKLAARTAR
                     RAARQALRFALLPPLPTIPDVEFLTPNSPKYDQYLAASNLRTTQRPALRALCKTGQSV
                     AAVLDWVRTNGLPFAVRSGGHSYEGFSQSMNVVIDTRLIDSVTLDPGSETVTVGAGAS
                     LGTVYKALKDTGFAFAAGSCPTVGVAGHALGGGFGLLGRIYGLTCDNLLSINIVTADS
                     QMLTADAQHEPDLFWACRGGGGGSFGIATGFSFRVQPLSQVLVFGVTWTLAKSKAARL
                     FKAWQQWAPATSNQITSIMKVGSRSDGKLSLRCIGQSTGSESALRGELDGLLALGQPS
                     SPLTINTLEFFDAVDHFSGGWAYETDYFKAKSDYVVNGLSDNGIEALLQALKGAPAGQ
                     IVALCDAYGGAIANVASSASAFPHRDQQTFCIQYFSSWTRAADTPQRLTNMSKAYAAM
                     RPHVPGACYVNYCDLDLPDWATSYWGANLSRLRQIKSQYDPNNIFRHAQSVQPIQSAS
                     SR"
     gene            complement(1976..>2276)
                     /locus_tag="VLJ17_08395"
     CDS             complement(1976..>2276)
                     /locus_tag="VLJ17_08395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016921282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="integrase core domain-containing protein"
                     /protein_id="HSV23033.1"
                     /translation="CRLQAMGMRDKPIAPGSPWQNGYAERLIGSIRRECSDHVIARRT
                     EHLRRVLLSYARSYNIWPTHRSLDKDAPVRWSTKRLGAIMSWPVLGGLHHRYCRI"
BASE COUNT          468 a          677 c          660 g          471 t
ORIGIN      
        1 aaccttttgc cagcgcgtga gccaaacatg cctgacctcg acgggtttgc catcccaata
       61 aaggttacca tgtcggtcga tacctaagca gtcgagctcc tctaacccaa cggttcgaac
      121 accaggttcc cacgcggcct tatttgctct ccactgcggg agctctctta actcatcctc
      181 tctcgtttgg gctgccataa actcaatcct ccatgtggta tctggtaacg attgaggtaa
      241 ccttctggtt gccgctctgc ccgcaattcg aactgataac cgcgtccacg cttcaatttc
      301 atcgactcga cgcgctctgg atcggctgaa cgctttgggc gtggcgaaaa atgttgttgg
      361 ggtcgtactg cgacttgatc tgccttaggc gagagagatt cgcaccccaa tagctcgtcg
      421 cccagtccgg cagatcgaga tcgcagtagt tgacgtaaca cgcgcccgga acatgcgggc
      481 gcattgccgc ataagccttc gacatgttcg tcagccgttg gggggtatcg gccgccctcg
      541 tccaactaga gaaatattga atgcagaatg tttgctggtc acggtgcggg aaggcggacg
      601 cgctgctcgc aacatttgcg atcgccccgc cgtaagcatc gcaaagcgcg actatctggc
      661 cggcgggcgc tcctttcagc gcctgcagga gggcttcaat tccattatcg ctgaggccat
      721 tcacgacata gtcagatttt gccttgaagt agtccgtctc atacgcccag ccgccggaga
      781 aatggtcgac tgcgtcgaaa aattcgagcg tgttgatggt gaggggcgac gaaggctgcc
      841 caagggcgag cagtccatcg agttcgccac gcaatgcgga ttccgatccc gtgctctgac
      901 caatgcaccg caacgatagc ttcccatccg agcggctgcc gactttcatg atcgaggtta
      961 tctgattcga ggtggcaggc gcccactgct gccaagcctt gaagaggcgc gcggccttgg
     1021 atttggccag cgtccatgtg acaccgaaaa ccagaacctg ggacagcggt tgaacgcgaa
     1081 acgaaaaccc tgtcgcaatc ccaaacgaac ctccaccgcc gccgcggcaa gcccagaaca
     1141 gatcaggctc gtgctgcgca tcggccgtca acatttggct gtcggcggta acgatgttga
     1201 tcgaaagaag gttgtcgcag gtcaggccgt aaatgcgacc aagcaatccg aagccgcccc
     1261 ccagcgcatg gcctgctaca ccgaccgtcg ggcagcttcc cgccgcaaat gcaaatccgg
     1321 tgtccttgag cgccttgtac accgttccta atgaagcgcc ggcaccgact gtcacggtct
     1381 cgctgccggg gtccaatgtc acgctatcga tcagacgggt gtcaatgaca acattcatgc
     1441 tttgcgagaa accttcgtag gagtggccgc cgctgcgcac cgcgaagggc agcccattgg
     1501 tgcgaaccca atcgaggacg gcggccacgg attgcccggt cttgcacaat gcccgcaacg
     1561 ccggccgctg cgtcgtgcgc agattggatg cagccaggta ttggtcgtat ttcggactgt
     1621 tcggcgtgag aaactcgaca tccggtatgg tcggtaacgg cggcagcagc gcaaaacgga
     1681 gagcctgtcg cgccgcgcgg cgcgcggtcc gggcggcgag cttcttcgtg gccagtggcc
     1741 tgggtcgaat tggatgcagt gaaaagggat gttccatggg acgtccttgg aacgcggtat
     1801 cggtctgctg ggctggcttc caggcagtca tgactatgcg cgtcttctgc aagcgtggaa
     1861 atcggttccg ctgtccctgt cggtgcaaat acggcgccgg ttgcaccggc cgagatggcc
     1921 tacatttctc ctccgctttt atggatccaa gacgctttcc tgtgtgtacc gaaaattaga
     1981 ttctacagta gcgatggtga agtccgccca gtacgggcca tgacatgata gcgccaagac
     2041 gcttggtcga ccagcgaacc ggagcgtcct tgtccaggga tctatgcgtt ggccaaatat
     2101 tgtaggagcg cgcgtaggac agcaggaccc gtcgcaaatg ctccgtccgc cgggcgatca
     2161 catggtcgct acactcgcgc cggatcgatc caatcaatct ctcggcgtag ccgttttgcc
     2221 aaggtgagcc gggcgcaata ggcttgtcgc gcatacccat ggcctgcaaa cggcac
//
LOCUS       DATILV010000373         3376 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1367166, whole genome shotgun sequence.
ACCESSION   DATILV010000373 DATILV010000000
VERSION     DATILV010000373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3376)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3376)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3376
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1367166"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            710..3094
                     /locus_tag="VLJ17_08400"
     CDS             710..3094
                     /locus_tag="VLJ17_08400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007607856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV23034.1"
                     /translation="MQQHITVPDVLPFLPVRNRLFVKYVALFVTLISLALLANGASEI
                     WFVSREHKDSLIRIEREQAEGAAAKIGQFVSGVEAQLGWTVQLPWDSSTFQQRQIDAW
                     RLLRQVPAISEVEQIDPSGHEQLRVSRTEPDVVGRATDVSREPKFRDAALHKRYYGPV
                     YFRQNSEPYMTLALSGGHDAGVSVAEVNLTFIWDVVSMIKVGERGQAYVVDALGRLIA
                     HPDISLVLRNTDLSGFAQVQMARAAISGEVPEPGQAARNLQGNEVLTSYAEIAPLGWL
                     VFIELPIDEAYAPLRATIARTALLLLAALGLALFGGMLLVRKMVVPIQALRAGAARIG
                     SGDLGQRISIKTGDELETLAVQFNDMAGKLQDSYANLEAQVEVRTRELEQSVLELRAL
                     GEVSQAVNSTLNLENVLNTIVAKAVQLSSTAAGSIYVFDEQRQQFELRATYGMDSATI
                     ASFAGHQFDIGEHYVGLALTRRDPFQIPDFRDEQANPTRDFVLSHGYRAFLIAPLLWQ
                     DTIVGVLVVRRKEPGSFPKTTVDLLTTFAAHSVLAIQNARLFSELQEKSRQVEIESQH
                     KSQFLANMSHELRTPLNAVLGYTELVLDGIYGDIPERMRGVMERVQINGRHLLGLIND
                     VLDLAKIEAGQLTLEITDYSLNDVVQGVLDAVEPLAVERRITLKGDISPNLPLARGDA
                     RRIAQVLLNLVGNAIKFTDIGEVSVRAGKLDRSFLIAVRDTGSGISEADQARIFDEFQ
                     QADNSSIRRKGGTGLGLSIAKRIIEMHGGAIWVESTLGQGSTFSFTLPITVDKP"
     gene            3114..>3376
                     /locus_tag="VLJ17_08405"
     CDS             3114..>3376
                     /locus_tag="VLJ17_08405"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV23035.1"
                     /translation="MKRCILVVEDQEDNRRILRDLLTNRGYKLVEAEDGEQALAMAER
                     QRPDLILMDVQIPLLDGYEVTRRLKADPQLRAIPVIAVTSYAL"
BASE COUNT          710 a          979 c          985 g          702 t
ORIGIN      
        1 gaaattctgg cctggggtta atcttgtcgt ggtgctcccc aacaaactct gcgttctccc
       61 aggttgccgg gagttcatca tggtatttgc gtccgtcggc gccggtcaaa tcggtcaact
      121 ccgccaactg cgcgcgcgtc agcctcggcc cgaccggttt tggtaatttc atcgctgctc
      181 tcccgtgttg aagtcatcgt ggtcgcggtt gcgcgaacga attggatggt tggggcaata
      241 agctgccatt gaataggccg gctgttgcca aaccgctgga agataattgc attctattga
      301 caggtaaagc agtagttgcg gacaacaaat ctcccccaaa agcaactgct ttcccagtaa
      361 cgcaagcacg attttacgcg aggattagta acaccgagtg tgagctacct cacactcgcc
      421 gaagggattt tccggcaggc ttacccaagg atacgtgatg gggatcatct cggatttttc
      481 gcgcgagcaa gcccaaaccg cctctgcaac gtccgcggcg cgaggacgtt agcaacacgg
      541 ggcacactcg caagaggacc taggtgacga aatataacca atcaatggga cgcgacgaag
      601 atgcgccatc aacatgacct tcctgcgacc ggctaggcga aactatccag cgcggcggca
      661 ggtcccgcct gcgtatttcg gcggcgccgt agcgtggata atagcactga tgcaacaaca
      721 catcacagta cctgacgtct tgccgttttt gccggttcgc aaccgccttt tcgtgaaata
      781 cgtcgcgctg ttcgtcacgc tgatctcgtt ggcgctcctt gcgaacggcg cctcagagat
      841 ctggttcgtc tcccgggagc acaaggattc cctcattcgc attgagcgcg agcaggccga
      901 aggtgccgcg gccaagatcg gccagttcgt cagcggcgtg gaggcgcagc tcggctggac
      961 cgtccaattg ccgtgggact cgagcacatt tcaacagcgc cagatcgacg cctggcgtct
     1021 gcttcggcag gtgccggcaa tttctgaggt tgaacaaatc gacccgtctg gtcatgagca
     1081 acttcgcgtt tcgcggacgg agccggacgt ggtcgggcgc gcgaccgacg tctcccgcga
     1141 gcccaagttt cgcgacgccg cattgcacaa gcgttactac ggcccggtct attttcggca
     1201 gaattcagag ccatacatga cactcgcgct gtccggcggt catgacgccg gcgtcagcgt
     1261 cgccgaagtc aacctgacgt tcatctggga cgtggtctcg atgatcaagg tgggcgaacg
     1321 cgggcaagcc tatgtcgtcg acgcactcgg ccgcctgatc gcacaccccg acatcagcct
     1381 ggtgctgcgg aacacggacc tctcagggtt tgctcaagtg cagatggccc gcgcggccat
     1441 ctcaggggaa gttcccgaac ccggtcaagc ggcccgcaat ctgcagggca acgaggttct
     1501 aacctcctac gcggaaatcg ctccgcttgg ttggctggta ttcatcgaac tcccgatcga
     1561 tgaagcctac gcgccgctcc gcgccacgat tgcacgaacg gctctgctgc tgttggccgc
     1621 tctcggcttg gcgttgttcg gcggcatgct tctggtgcgc aaaatggtgg tgccgatcca
     1681 agcattgcgt gccggcgctg cccggatcgg cagtggcgac cttggtcagc gcatctcgat
     1741 caagaccggt gatgaactcg aaacgctcgc cgtccaattc aacgacatgg ccggcaagct
     1801 ccaagactct tacgccaatc tggaagccca ggtcgaagta cgcacccgcg agcttgagca
     1861 atcggtactc gaacttcgtg ctctcggcga ggtcagccaa gctgttaatt cgacactcaa
     1921 cctcgaaaac gtgctgaaca cgattgttgc caaggccgtg cagttgtcga gcactgcggc
     1981 cgggtcgatc tacgtgttcg atgagcagcg tcagcaattt gaattgcgcg cgacatacgg
     2041 catggattct gccacaattg cgtcgttcgc cgggcatcag ttcgatattg gcgagcacta
     2101 cgtgggcttg gcgctgacac ggcgagaccc cttccaaatt ccggattttc gcgacgagca
     2161 ggcaaacccg acgagggact tcgttctaag tcacggctat cgggctttcc tcattgcacc
     2221 gctattgtgg caggacacaa ttgtgggcgt tctggtcgtg cgccgcaaag agcctggatc
     2281 atttccgaag acgacggtcg acctgctcac gactttcgcg gcgcattcgg tgcttgccat
     2341 tcagaatgcc cgcctgttca gcgaactcca agagaaaagc cgccaagtgg agatcgagag
     2401 ccagcacaaa tcacagtttc ttgccaatat gagccacgag cttcgtacgc ccctgaacgc
     2461 cgttctcggc tacaccgagc tggttctcga tggaatctac ggcgacatcc cggagcgcat
     2521 gcgtggcgtc atggagcgcg ttcagatcaa cgggcgccat cttcttgggc tgatcaacga
     2581 tgtgcttgat ctggcgaaga ttgaggccgg tcagttgacg ctcgaaataa ccgactactc
     2641 gctaaacgac gtggtgcaag gtgtgctcga tgctgtcgaa ccgctcgccg ttgaaaggcg
     2701 gatcacgttg aagggcgata tatcgccgaa tcttcccctt gcgcgagggg atgcacgtcg
     2761 catcgctcaa gtcctgctga accttgtcgg caacgcgatc aagtttaccg atatcgggga
     2821 ggtatcggtg cgggcgggaa agctggaccg ctcgttcctg attgccgtca gggacaccgg
     2881 ctcgggcatc tccgaggctg atcaggctag gattttcgat gagtttcagc aggccgataa
     2941 ctcgtccatt cgccgcaagg gcgggaccgg gctgggatta tcgattgcca aaagaatcat
     3001 cgaaatgcac ggcggggcga tctgggttga gtcgacgttg gggcaaggct cgaccttctc
     3061 gttcacattg ccaatcactg tagacaaacc gtagacaaaa agacgccata gccatgaaaa
     3121 gatgcattct cgtcgtcgaa gatcaagaag acaatcgacg gatccttcgc gatctgctaa
     3181 caaacagagg atacaaattg gtcgaggccg aagatggcga gcaggcgctc gcgatggcgg
     3241 agcgccagcg gccagacctc atcttgatgg acgttcagat tccactgctc gacggatacg
     3301 aagtgacgcg tcgcctcaag gccgatcccc agttgcgggc gattccggtg atcgcggtta
     3361 cctcgtatgc cctgag
//
LOCUS       DATILV010000374         2249 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3923049, whole genome shotgun sequence.
ACCESSION   DATILV010000374 DATILV010000000
VERSION     DATILV010000374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2249)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2249)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2249
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3923049"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1333)
                     /locus_tag="VLJ17_08410"
     CDS             complement(<1..1333)
                     /locus_tag="VLJ17_08410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018268011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSV23036.1"
                     /translation="MIDWFVAYSLHKRLVVAMICVFVAIYGYYSWTQLVIEAYPDIAD
                     TSAQVVTQAPGMAAEEVEQRITIPLERELNGTPGLLFMRSKSTFGLSLITIVFRDGIE
                     TYWSRQRINERIQNVTLPPNITAGLDSVTSPTGQIYYYTVESDTKGQRELSEIQRWVI
                     IPALKQVPGVADVSNFGGITTQFQLELDPQQLMRFNLSLANVEAAINANSTSAGGSVV
                     TRGELGFVIRAIGLVQTLEDFGAIVVTQRNGTPIFLRDLGRLKLANLERHGIVGKNQR
                     NDVIEGTVLLLKDDNPSRVLAGVHAKVAELNERLAADDVQIVPYYDRSDLVDQTVSKV
                     SHTILQGIGLVFIVLILFLGSPRSALIVGVTIPFAMVTVFVLMNLFKIPANLLSLGAI
                     DFGIIVDAAIVMTDAILRRREAKPDEPLTEDDARAAAHQVARPIFFATLIII"
     gene            complement(1326..>2249)
                     /locus_tag="VLJ17_08415"
     CDS             complement(1326..>2249)
                     /locus_tag="VLJ17_08415"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSV23037.1"
                     /translation="RKLILPAVVEADPAHTVKVLPPVAGRVTDLLVQLGERVVQGQEL
                     AVIDSGDLAQAYADIEKAKSVRTLTKNALDRQLNLEKAGGTAIKDREQAQSDYNQAVA
                     EIDRAEARLRSMGVPADQKEQSRLLSMRAPVSGSVIDLQVARGAFLNDLTAAIMTIAN
                     LGTVWVTANVPEKDTALVTKGQDVNVTFPAYPGEVFAGKVLFVSDVLDPDTRRTKVRI
                     AFENPDTKLKPNMFADATFVAPKRMVQVVPTLALVLKDESDRVFVEVAPWTFEARTVE
                     VNFQQGDQAIVESGLKAGERIVVKGGVLLND"
BASE COUNT          463 a          656 c          675 g          455 t
ORIGIN      
        1 tgatgatgat cagcgttgca aagaagatcg gtcgcgcaac ctgatgggcg gcagcgcggg
       61 catcatcttc ggtgagcggt tcgtcgggtt tggcctcgcg acgccgcagg atcgcatccg
      121 tcataacgat tgcggcatcg acgataatgc cgaaatcgat cgcgccgagg gacaacaagt
      181 tcgcgggaat cttgaacaag ttcatcagga cgaagaccgt caccattgcg aacggaatgg
      241 tgacgccgac gatcagggcg ctacgcggac tgccaaggaa aagaatgagc acaatgaaaa
      301 cgaggccgat accctgcaaa atggtatgcg aaaccttgct gaccgtctga tcgacgagat
      361 ctgagcggtc gtaataaggc acgatctgca cgtcatcggc tgccaagcgc tcgttgagct
      421 cggccacctt tgcatgaacc cctgccaaca cccgcgaggg gttgtcgtcc ttcagcagca
      481 ggacagtgcc ttcgatgaca tcgttgcgct ggttcttgcc gacgatgccg tgtcgttcca
      541 ggttggcgag cttgagccgg ccgagatcgc gcaggaagat gggcgtgccg ttgcgctgcg
      601 tgaccacgat ggcgccgaag tcctcaaggg tttgaacaag gccgatggca cggatgacga
      661 acccgagttc gccgcgagtc acgacgctac cgccagcgct ggtgctgttg gcattgatag
      721 cggcttcgac atttgccagc gataggttga agcgcatgag ctgctgcgga tcgagctcaa
      781 gctgaaactg cgtggtgatg ccgccgaagt tcgagacgtc ggcgacgccc ggcacttgct
      841 tcaacgcggg aatgatgacc cagcgctgaa tctcggaaag ctcgcgctgc cccttggtgt
      901 cggattcgac cgtataataa tagatctggc cggtgggcga ggtcaccgag tcaaggcccg
      961 ccgtaatgtt gggcggcaag gtgacgttct ggatacgctc gttgatgcgc tgacgtgacc
     1021 aataggtctc gataccatcg cggaaaacga tggtgatcag cgacagtccg aacgtgctct
     1081 tggaccgcat gaacagcaag cccggcgtcc cattgagttc gcgctcgagc gggatcgtga
     1141 tgcgctgttc gacctcctcg gccgccatgc cgggcgcctg ggttacaact tgtgcactgg
     1201 tgtcggcgat gtccggatag gcttcgatca caagctgggt ccaggaataa tagccataaa
     1261 tggcgacgaa aacgcaaatc atcgccacaa caagacgttt gtgcagcgaa taggcgacga
     1321 accagtcaat cattaagaag cactccgccc tttacgacga tacgctcgcc ggccttgagg
     1381 ccgctctcga caatggcttg atcgccctgc tggaaattga cctcgacagt gcgcgcctcg
     1441 aacgtccatg gcgccacctc aacgaatacc cgatcggatt cgtccttcag gaccaatgcc
     1501 aaggttggca cgacctgcac catgcgcttc ggcgccacaa aggtagcgtc ggcgaacatg
     1561 ttcggcttta gctttgtgtc gggattctcg aacgcgattc ggaccttggt gcggcgcgtg
     1621 tcgggatcga gaacgtcgct cacgaagagg actttgccgg cgaagacctc gcccggatag
     1681 gccgggaagg tgacattgac gtcttgcccc ttcgtaacca atgcggtgtc cttttccggc
     1741 acgttcgcgg taacccagac ggtgccgagg ttcgcgatcg tcatgattgc ggcagtaaga
     1801 tcgttgagaa atgcgccccg tgccacctgc aggtcgatta cactgccgga caccggcgcc
     1861 ctcatggaca acagccggga ttgttccttt tgatcggctg gcacgcccat ggagcgcagc
     1921 cttgcttcgg cgcgatcaat ttccgcgacc gcctgattgt aatcgctctg cgcctgctcc
     1981 cgatccttaa ttgccgtccc gcccgctttc tccaggttca attgccgatc cagcgcattt
     2041 ttggtgagtg ttcgtacgga cttcgccttt tcgatatccg cataggcctg cgcaaggtcg
     2101 ccggaatcga tcaccgcaag ctcctgcccc tgcacgacgc gttcaccaag ctggaccaag
     2161 agatcggtca cgcggccggc caccggcggc agtactttta cggtgtgggc cggatcggct
     2221 tccaccacgg ccggcagtat cagcttgcg
//
LOCUS       DATILV010000375        19162 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1878478, whole genome shotgun sequence.
ACCESSION   DATILV010000375 DATILV010000000
VERSION     DATILV010000375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 19162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19162
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1878478"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1077)
                     /locus_tag="VLJ17_08420"
     CDS             complement(<1..1077)
                     /locus_tag="VLJ17_08420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HSV23038.1"
                     /translation="MRNVERLCLAHFWVAFAAFLAAAVLGTWQMWVRSPLGANVGTPG
                     QYFLSVTAHGVSMAYVLTIFFIMGFGYFVAVTALGRPLPGKLWAWIAFWIAIIGVVMA
                     LVPILMGQASVLYTFYPPLTASPWFYIGLVFIVAGSWIWCVLMLVAMRQWKRDNPGRP
                     VPLAMFATVANSVLWLWTTVGVAIELVFQVIPASLGFGQTIDAGLARTLFSWTLHAIV
                     YFWLIPAYIAFYTMVPRAAGGRLYSDTMGRFTFILFLVYSLPVGMHHLLMDPEHGNGW
                     KFIQVLLTAFVSVPTLLTIFTVTASLEIAGRLRGGRGVFGWITALPWGRPTVLAAGLS
                     FVMLGFGGFGGLINMGYGMNAMVHN"
     gene            complement(1064..1621)
                     /locus_tag="VLJ17_08425"
     CDS             complement(1064..1621)
                     /locus_tag="VLJ17_08425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C oxidase subunit II"
                     /protein_id="HSV23039.1"
                     /translation="MTEQHAQPHERRILGTELLWAFGVGVLIAAILSMVVFTALTRDI
                     NPPSNVERIDPKTLHLSGEFAEQNLGTTVARDGGVTVRIITTQFMFAPRCLVVPEGRR
                     VTLRFASPDVIHGILITGTNVNTMVVPGFVAQVYSEFTHSGDLLMPCHEYCGLGHSEM
                     WATVRVVPESEFKPDLDGRVACAQR"
     gene            complement(1625..1825)
                     /locus_tag="VLJ17_08430"
     CDS             complement(1625..1825)
                     /locus_tag="VLJ17_08430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013948330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23040.1"
                     /translation="MMPTDQPSIADDPLEVVDQVDEAALAEVMRVVPLGAGVLAGAAV
                     ALLVIGYLVIYLLVFLPRGTVG"
     gene            2103..2726
                     /locus_tag="VLJ17_08435"
     CDS             2103..2726
                     /locus_tag="VLJ17_08435"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HSV23041.1"
                     /translation="MASLLRCATIVSLAAVLAVSATPTLLLAQGFRAPPETMHIEDQP
                     GYVPDPEAERLPAAFQRQAVFYRTTEAPGTIIVQTSERFLYVVQGNNRAIRYGIGVGR
                     EGFQWSGLLTISRKAEWPDWTPPPEMISRQPYLPRFMAGGPGNPLGARALYLGATIYR
                     IHGTNQPQTIGQTVSSGCFRLVNSDVIDLYDRIPVGTKVIVHQAPAT"
     gene            2779..3792
                     /locus_tag="VLJ17_08440"
     CDS             2779..3792
                     /locus_tag="VLJ17_08440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HSV23042.1"
                     /translation="MRVCAVAAVALATPTLCLSASSAQTLATIKQRGVIACGVSEGIY
                     GFSIETPTGWSGFDVDLCRALAAAVFNDPGKVRYVPLNAAARFVSLQSGTIDVLSRNS
                     TWTMSREIELKLVFPAVTYYDGQGFLVRRARNATSALELDHVKVCVQGGTTTELNLGD
                     FFSTNNLKFERIAFAALADAVKAYDAGRCDVFTSDVSQLYALRLTLTTPDDHIILPDV
                     ISKEPLGPAVRQGDDQWANIVKWTAFALINAEELGVSSKSIDQAVLSEKPEVRRLTGV
                     EGSFGEQAGLTKDWVVRIVRSVGNYGEMFERNVGVDSKLGIPRGLNQLWTSGGIVYAP
                     PIR"
     gene            complement(3835..4191)
                     /locus_tag="VLJ17_08445"
     CDS             complement(3835..4191)
                     /locus_tag="VLJ17_08445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23043.1"
                     /translation="MRIITRALLVTALSSLSYVAAAFDRGQYNDVPDHVRSWFKSVRS
                     PHGVPCCDIADGHRTAYDMRSDGYWVPIEGKWQQVPPEAIVYNAGNPVGEAVVWYVQQ
                     GANSYYIRCFVPGGGV"
     gene            4567..5574
                     /locus_tag="VLJ17_08450"
     CDS             4567..5574
                     /locus_tag="VLJ17_08450"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSV23044.1"
                     /translation="MSLPPTAVPPPFQITRASHAVITVSDLARSRAFYADGLGLVVSD
                     ETSDTLYLRGVEEAAHHSLVLKQASATPVAERVGLRAFTEEDLDRAKSHFDKAGLPAK
                     FVEAPHQGRTLHVADPVGTPLELCATMTTMPRLIVAFDKRKGVAPQRLDHFQIVVPDV
                     PRACAFYTGMGFRLSEYVCPDESDELLFVFLQRKGNPHDIVFANGSGPRLHHFAFTVA
                     ESACLFQACDVLGSLGFGHRLEHGPGRHGPGHALFVYFRDPDGHRVELFNTHYQMMDI
                     ENQPVRWNASYTRQRGWGLPPPRKWHFEASRFAGVTPRDPARMPDPYTLEKFLDERAD
                     G"
     gene            5628..6470
                     /locus_tag="VLJ17_08455"
     CDS             5628..6470
                     /locus_tag="VLJ17_08455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HSV23045.1"
                     /translation="MKLASYMVDGKATFGVVAGDSIINATRCLGGRFSTLRQVLAADA
                     LDEVARVTTGQAPDHKLSDFKFLPVVPDPQRIVCVGINYRSHAEETGREISPAPSVFL
                     RLADTLVGHGSALVRPKVSDKFDFEGELAVVIGHGGRHIAQADALKHVAGYTCFVDGS
                     VRDYQKFSVTSGKNFPATGPLGPVLVTTDEIPDPTKLTLVTRLNGAEMQRSGTDMLIY
                     SIPQVIKFISDFTSLAAGDVIATGTPAGVGHRRTPPVWMKAGDVLEVEISGIGTLRNP
                     VVDE"
     gene            6662..7117
                     /locus_tag="VLJ17_08460"
     CDS             6662..7117
                     /locus_tag="VLJ17_08460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23046.1"
                     /translation="MPKASPHSISRNFAARCRCKTLKHRGYLIKMANSKRLAGLIGPT
                     LIVIAMSKALNFRILATDVIPLIYLVGILLFASGLSIVSAHNIWIRRWPVLITLLGWF
                     FIFSGLFWMFAPEIQLSLQDTPIYGVFIVDLALLAIGLYLTFEAYWTSR"
     gene            7335..7952
                     /gene="rpsD"
                     /locus_tag="VLJ17_08465"
     CDS             7335..7952
                     /gene="rpsD"
                     /locus_tag="VLJ17_08465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HSV23047.1"
                     /translation="MSKRVEAKHKLDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGK
                     LSDFGVQLRAKQKLKGYYASISEKQFRGIYAEAIRMKGDSGANLIGLLERRLDAVVYR
                     AKFVPTVFAARQFINHGHVKVNGRRVNIPSFQVKVGDVVEVKDKSKQLALVLEATGLG
                     ERDVPDYVEVDHNKMTAKLARVPTLTEVPYPVQMEPHLVVEYYSR"
     gene            complement(8019..8357)
                     /gene="grxD"
                     /locus_tag="VLJ17_08470"
     CDS             complement(8019..8357)
                     /gene="grxD"
                     /locus_tag="VLJ17_08470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HSV23048.1"
                     /translation="MGIEQFIDNEVKANDVVLFMKGTPQFPMCGFSGQVVQILDYLGV
                     PYKGLNVLENDDLRNGIKAYSNWPTIPQLYVKGEFVGGCDIVREMFQAGELQGLLKEK
                     GLAVKESAQA"
     gene            complement(8492..8728)
                     /locus_tag="VLJ17_08475"
     CDS             complement(8492..8728)
                     /locus_tag="VLJ17_08475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family transcriptional regulator"
                     /protein_id="HSV23049.1"
                     /translation="MPMQAHDIERLIKARIPDAEVTIRDLAGDGDHYSATVLSEAFRG
                     KSRVQQHQLVYEALKAEMGGKLHALALQTGVPGG"
     gene            complement(8833..11058)
                     /gene="purL"
                     /locus_tag="VLJ17_08480"
     CDS             complement(8833..11058)
                     /gene="purL"
                     /locus_tag="VLJ17_08480"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HSV23050.1"
                     /translation="MLPNQPEVTPRLVAEHGLKPDEYDRILKLIGRAPSFTELGIFSA
                     MWNEHCSYKSSKIYLRGLPTAGRCVIQGPGENAGVIDIGGGLACVFKMESHNHPSYIE
                     PYQGAATGVGGILRDVFTMGARPIACLNALSFGDANHPKTRHLVSGVVSGIGGYGNSF
                     GVPTVGGSVRFHSRYDGNILVNAMAVGLVETDKIFYAAASGVGMPIVYLGSKTGRDGI
                     HGATMASAEFGENSEEKRPTVQVGDPFAEKLLLEACLEIMAKGCVIAIQDMGAAGLTC
                     SAVEMGAKGDLGVTLNLDKVPCRETGMTAYEMMLSESQERMLMVLKPEKEAEAEAIFR
                     KWGLDFAVVGETTPTKRFIVRHRGAVMADLPIKELGDEAPVYRRPFVEPAKLAVVDAP
                     TVVPPMPIADALEKLIGSPDLCSKRWVWEQYDHVILGNTVQRPGGDAAVVRVNDGPTA
                     LALTTDVTPRYCEADPFEGGKQAVAEAWRNLTAVGATPLAITDNLNFGNPERPEIMGQ
                     FVGCVRGISEACRVLDFPVVSGNVSLYNETNGRAILPTPSIGAVGLLADFTGSATLAF
                     KAAGEAILLVGQSQGWLGQSLYLRDICGREEGAPPPVDLAAERCNGDFVRALIERKIA
                     TAVHDVSDGGLAVAVAEMAIAAGIGADLREASGTPPSEQLDAALWFGEDQARYVVTVR
                     KDDVADVLILAAQQSIPVRRIGTTGGETLTLPAQRPILVAILREQFERWLPQYMSGGH
                     R"
     gene            complement(11085..11825)
                     /locus_tag="VLJ17_08485"
     CDS             complement(11085..11825)
                     /locus_tag="VLJ17_08485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV23051.1"
                     /translation="MPLLAIVLLAIDVSLIVHAAKTGRFSPWAYIILMIPVAGAIAYV
                     VVELIPEWLGSYQGQDARRRVSKALNPEKTYRALKDQVEIADTIANRQALAEECLALG
                     KFDEAEIQYDAILGQPLGDDPGFALGRARAQFGQGRFKGAKATLDDLRQRWPDYQSAE
                     GHLLYARALDEDGRVDEAIEEYQAVSGYYVGIEPRVRYGLALRKVGREADAQAVLADV
                     VRRMSRAPKFARKVQAQWISMAQAALRG"
     gene            complement(11945..12646)
                     /gene="purQ"
                     /locus_tag="VLJ17_08490"
     CDS             complement(11945..12646)
                     /gene="purQ"
                     /locus_tag="VLJ17_08490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurQ"
                     /protein_id="HSV23052.1"
                     /translation="MKAAVVVFPGINRERDMARTLKLVSGREPAMVWHADTALPAGTD
                     LVVVPGGFSYGDYLRCGAIAARAPIMDAVWAFAAKGGLVLGVCNGFQILCEAGLLPGV
                     LMRNARLKFICRDVYLRVERSDTPFTGGYNAGQVICVPTAHGEGNYLADADTIARLEG
                     DGRVVFRYTSPDGTLAPAWNFNGATNAIAGIVSERGNVLGMMPHPENHVEAALGSTDG
                     RGLFQGLVEHLSRAA"
     gene            complement(12875..13117)
                     /gene="purS"
                     /locus_tag="VLJ17_08495"
     CDS             complement(12875..13117)
                     /gene="purS"
                     /locus_tag="VLJ17_08495"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HSV23053.1"
                     /translation="MKAQVTVTLKSGILDPQGKAIEGALKSLGVAGIASVRQGKVFDI
                     EIADSDSAGAEAKLKEAAEKLLANTVIENYNVEILG"
     gene            complement(13157..13924)
                     /gene="purC"
                     /locus_tag="VLJ17_08500"
     CDS             complement(13157..13924)
                     /gene="purC"
                     /locus_tag="VLJ17_08500"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008974302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HSV23054.1"
                     /translation="MSRRRRIYEGKAKVLYEGPEPGTLIQHFKDDATAFNAKKHQVIE
                     GKGVLNNRISEYVFQHLNDIGVPTHFIRRLNMREQLIREVEIIPLEIVVRNVAAGSLS
                     QRLGIEEGTQLPRSIIEFYYKNDALGDPMVSEEHVTAFGWATPQEIDDIMALAIRVND
                     FLSGLFLGVGIRLVDFKMECGRLWENDMMRIVVADEISPDSCRLWDIKSNEKLDKDRF
                     RRDLGGLLEAYTEVAKRLGIMSEGERPQGIGPVLVKS"
     gene            14224..14547
                     /locus_tag="VLJ17_08505"
     CDS             14224..14547
                     /locus_tag="VLJ17_08505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019964627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1476 domain-containing protein"
                     /protein_id="HSV23055.1"
                     /translation="MSTFDKREEGFESKFAHEEELRFKAHARRNKLVGLWAAEKLGLA
                     GVAAETYAANIVTADLENPGSDSVFSTLRKDFDDKGVAQSDHQIRRTMEEAMARAVAE
                     IQAGR"
     gene            complement(14616..18386)
                     /locus_tag="VLJ17_08510"
     CDS             complement(14616..18386)
                     /locus_tag="VLJ17_08510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV23056.1"
                     /translation="MYACGWQLGAVLLVCAVAGGSTALAQKVPAEISVDTSGGYARIV
                     YRFSGDVDANVRMSNGILVIGFNVPVEASTDRLNAAAAGYVSAARRDPDGRGLRIALA
                     RKLTLHSMQANDRLFVDLLPDGWKGPPPPLPSDVVEELARRVKEAERRQRQMRQLELQ
                     KQMVTTRVRVAHQPNFSRYVFELPDLVTVTAERNGEKLDLKLDAPLKFDLADAKASLP
                     APIEHLDAETDEQTTTVKFTFIGKVDVRTFREDNSYVVDVAAAVPAYKRGDTGMPGAT
                     ADPAPPKGGTLGGLEVPSTIPARVPDNGKDAARNNAPPNAPSGDLGKAGGVLPMAGPA
                     ANLAAPIEMSPPSMTFDPVKQIDAANRSAAGPAAPRPTDVMRAGELPAERTIPDSAAQ
                     PQPSSPALAPQAAAPTDAPPADPNGAVKVEMRRQSDNLKLVFPFSAPTSGAVFRRANT
                     LWAVLDTATKINIDALQKDPTKTIAGASLFSGPGYQVVRIKFERPRLTSLSAADDSWT
                     VAIGDTVLDPTIPLVIVRNTMGVSHSTAIAAFDRPQFLHRIPDPDAGDTLLVVTGFAP
                     ARGFLRDQDFVEFRLLASTHGIVIQQFADDLDVELSGDKVVMSRPQGLALSAANQIGR
                     RNGPHTTVIDPQAWGFDREADFVERRTNLITAAAGAAENKRLMPRLALARFYLARDMY
                     EEAKGVLDVALSENHPSVEDASALVMRAIAKIMMGRAEEGLADLASPIVGDNHDALLW
                     RGLAFAKLGKWPEANEAFHKMETAIPALPVELQRRVLVESARASIETHDFAAAADKLN
                     NFDTIGTPKELEPRIAVLTGRVAEGLGRNEDALTAYRTASDSADRGAAARGRLHDIAL
                     RYSLGEMKKPDVISELESLTTFWRGDDTEIEALQLLARLYTDEGRYREAFHIMRTAFK
                     AHPNSELTRRIQDEAAATFDSLFLAGKGDSIPAVEALALFYDFRELTPIGRRGDEMIR
                     HLTDRLVSVDLLDQAAELLQHQVDHRLQGAARAQVAMRLAVIYLMNRKPDKALATLRS
                     SRNSDIANALRNQRLLIEARALSDTGRHELAIDIISNLDGREAIRVRADTFWAAKRWR
                     DAAEQIELLYGDRWQNFDPLTDPERIDLLRAAIGYAIDDDTIGLTRFQEKFAAKMMEG
                     PDRRAFEVATSPLAAASDEFRDVVRRIASIDTLDGFLRELRLRYPETGSFSSTPSADA
                     PATPTPPKPKAAPGNALLRRPQADPKSTASIVAIPTRPARTIARAGNSRPLP"
     gene            complement(18669..18821)
                     /locus_tag="VLJ17_08515"
     CDS             complement(18669..18821)
                     /locus_tag="VLJ17_08515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23057.1"
                     /translation="MPRRLAERGGSAKEISVVSGHQTLREVERYTAAADQRRLSVAAM
                     KKLKDG"
     gene            complement(18927..>19162)
                     /locus_tag="VLJ17_08520"
     CDS             complement(18927..>19162)
                     /locus_tag="VLJ17_08520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23058.1"
                     /translation="ALAGRLTGLATVRGSFKRAARNAVFSVINRITPAKQQMMLNLSG
                     LGLKDRAQLPPLASTRQMASRSASSVATASDRR"
BASE COUNT         3816 a         5989 c         5679 g         3678 t
ORIGIN      
        1 gttgtgcacc atcgcgttca tgccgtagcc catgttgatg agcccgccga agccgccgaa
       61 gccgagcatc acaaacgaca ggccggccgc cagcacggtc ggtcggcccc atggcagcgc
      121 ggtgatccag ccgaagacac cgcggccgcc gcgcaggcgc cctgcaattt ccaacgaagc
      181 cgtgacggta aagattgtca gcagcgtcgg taccgatacg aaggctgtga gcaacacctg
      241 gatgaacttc cagccattgc catgctcggg atccatcagc agatgatgca ttccgacggg
      301 caggctgtag accagaaata gaatgaaagt gaagcggccc atcgtgtcgc tgtagaggcg
      361 tccgccggcc gcgcgcggca ccattgtata aaatgcgatg taagccggga taagccaaaa
      421 atagacaatg gcatgcaggg tccatgagaa cagcgtgcgc gcgagtccgg catcgatggt
      481 ctgcccgaag cccaacgacg ccggaattac ttgaaaaacg agctcgatcg ccacgccgac
      541 cgtggtccag agccacaaca ccgaatttgc caccgtcgca aacatggcca atggcacggg
      601 ccgccctgga ttgtcgcgct tccattggcg catcgcaacg agcatcagaa cacaccatat
      661 ccacgagccc gccacgataa ataccagtcc gatatagaac caggggcttg ccgtaagcgg
      721 aggataaaac gtgtaaagca ccgaggcctg gcccatgaga atcggaacga gcgccatcac
      781 gacgccgatg atcgctatcc aaaaggcgat ccacgcccaa agcttgccag ggagaggacg
      841 gccgagcgcg gttaccgcga cgaaataacc gaagcccatg ataaagaaga tcgtcagcac
      901 ataggccatc gagacgccgt gcgccgtcac cgacaggaaa tattgtcccg gcgtgccgac
      961 gttggcgccc aaagggctgc gaacccacat ttgccaagtt ccaaggacag cggccgctag
     1021 aaatgccgcg aatgccaccc agaaatgtgc gaggcaaagc cgctcaacgt tgcgcacagg
     1081 cgaccctccc atccagatcc ggcttgaatt cgctttctgg cacgactcga acggtggccc
     1141 acatctcgct gtggcccaga ccgcaatact catgacaggg cataagcaag tcgccgctat
     1201 gcgtgaattc ggagtaaact tgggcgacaa agcccggcac gaccatggtg ttcacattgg
     1261 tcccagtaat gaggatgccg tggatgacgt ctggtgacgc gaaccgtagc gtgacacgcc
     1321 gtccctcggg aaccaccaag caacgtggcg caaacatgaa ttgtgtggtg atgatccgca
     1381 cggtgacgcc tccgtcccgc gcgacggtcg ttcccaggtt ttgttcggcg aactcgcctg
     1441 acagatggag cgttttgggg tcaatgcgct ccacgttact gggcgggttt atgtctctcg
     1501 tcagcgcggt gaagaccacc atgctgagaa tcgcggcgat aagcacgccg acgccgaacg
     1561 cccacagcaa ttccgtgccg agaattcgcc gttcgtgcgg ctgggcatgt tgctcggtca
     1621 cgagctagcc caccgtgccc cgcgggagga agacaagcag atagatcacc aaatagccga
     1681 tcaccagcaa ggcgacagcg gcgccggcga gcacccccgc tccgagaggc accacgcgca
     1741 taacctcagc gagcgcggcc tcatcgactt gatcgacgac ttcgagcgga tcgtcagcga
     1801 tagacggctg gtcggtaggc atcatccccc agaagcgtgc gtacccaagt tttagttttt
     1861 gctgactttg aattctgcac ccgagtcgcc aaaaaagcca gtggattcaa gaaatccgca
     1921 gtttgccctg gacccaggaa gcctgatatt cgcaaacgac cgcattgctc cccgcgatgc
     1981 ggcttgccat aaaaaagtcg catcgcagct gcggcattgt cgggatgggg tgacatcaac
     2041 ggcgccggta ttccgtgaag catgatcgcg cgggactttg gcccgcgcgt tgcgaggtga
     2101 acatggcatc attgttgcgg tgcgcgacga tcgtttctct ggctgcggta ttggccgtca
     2161 gcgccacgcc tacgctgtta ctggcccagg gcttccgggc gccgcccgaa accatgcaca
     2221 ttgaagatca gccgggttac gtgccggacc cagaggccga acggcttccc gctgcctttc
     2281 agcgtcaggc cgtgttctat cgcaccaccg aggcacctgg cactatcatc gtacagacgt
     2341 cagagcgctt tctgtatgtg gtgcagggga acaaccgggc cattcgctac ggcatcgggg
     2401 ttgggcgcga gggattccaa tggtcgggcc tgttgacgat ttctcgtaaa gccgaatggc
     2461 ctgattggac gccgccgccg gagatgatct cgcgccagcc ctatctgccg cgcttcatgg
     2521 cgggcggccc cggcaacccg ttgggggcac gcgcgcttta cctcggcgca accatatacc
     2581 gcattcacgg cacgaaccag ccgcagacca tcggtcaaac cgtgtcctcg ggatgcttcc
     2641 ggttggtcaa ttccgacgtc atcgaccttt acgaccgcat tccggtcggc accaaggtga
     2701 tcgtccatca ggctcccgcc acgtaagtcc cccaccacat agcgagaata tgtcatgact
     2761 tacttttctg gattgaggat gcgcgtatgt gctgtcgcgg ctgtggcgct ggccacgccg
     2821 acgttgtgtc taagtgccag ctcggcgcag acgctggcca cgatcaagca gcgcggcgtc
     2881 attgcctgcg gtgtcagcga gggcatctat ggattttcca tcgagacgcc gaccggctgg
     2941 tccggtttcg acgtcgattt gtgtcgcgcg ttggcggcgg cggttttcaa tgatcccggc
     3001 aaggtacgct acgtaccgct caacgccgcg gctcgcttcg tatcactgca atctgggacg
     3061 atcgacgtgc tatcgcgcaa ctcgacctgg acaatgtcgc gcgaaatcga gctcaagctg
     3121 gtgtttcctg cagtcaccta ttacgatggc cagggctttc tggtacgtcg cgcgcgaaac
     3181 gccacgtccg ccttggaact cgaccacgtc aaggtctgcg tgcaaggggg caccacgacg
     3241 gaactcaacc ttggcgattt tttcagcacc aacaatttga aattcgagcg catcgccttc
     3301 gcggcgcttg ccgacgccgt caaggcttat gacgcgggcc gctgcgacgt cttcaccagt
     3361 gacgtgtcgc agctctatgc gctgcggctt acgctcacga cacccgacga tcacatcatc
     3421 ctgcccgatg tcatctccaa ggagccgctg gggccggcgg tgcgccaggg cgacgaccaa
     3481 tgggcgaaca tcgtcaaatg gacggcattc gcgctgatca acgctgagga gctcggcgtc
     3541 tcatcgaagt cgatcgatca ggcggtgctg tccgaaaagc cggaggtcag gcgcctcacc
     3601 ggggtcgaag gcagtttcgg cgagcaggcc ggcctgacga aagactgggt cgtgcgcatc
     3661 gtccgcagcg tgggcaacta cggcgagatg ttcgagcgca atgtcggcgt cgactcgaag
     3721 ctcggcattc cgcgtggtct caatcagcta tggacaagtg gcggcatcgt ttatgcgccg
     3781 ccaattcgct gaaatcagtc cctcacgcga tctcaatccg gtacagtacc gtgatcacac
     3841 gccaccgccc ggcacgaagc agcggatata atagctattg gcgccctgct gcacgtacca
     3901 aaccaccgcc tcgccaaccg gattaccagc gttgtaaacg attgcctccg gtggaacctg
     3961 ttgccatttg ccttcgattg gcacccagta gccatcgctg cgcatgtcgt aagcggtacg
     4021 atggccatcc gcgatatcgc agcacggaac gccgtgcggg ctgcggacgc tcttgaacca
     4081 ggaccgcaca tggtcgggaa catcgttata ttggccacgg tcgaatgccg ccgcgacata
     4141 ggacaggctt gacagggccg taactaacag tgcacgggtg attatgcgca tgtttgtcaa
     4201 tcctcgcatg tattggcctc gcatgtattg gcctcacata tattggcctc gcatatattg
     4261 gccgctaaca cggtaaccgg agatgtacgc atccggccgc gctcaggttg cggcggttcc
     4321 tggcggcgcc ttcacaaagg ctgctcacgc ctagaagcaa taatcgcgcc aacgctgccg
     4381 aaccttacgg acgccgacca catggcgtgg cgcatatagt aggtatgtgg ggtaccgtgg
     4441 catcattttc aatatatgtg gcatccacag gcggcgcgtc cgtggatttg cgtaccgatg
     4501 tttacggatg cttcgtgagc gcgatgacgc gtgcgccgac aagttctcaa gcatggacgg
     4561 accccgatga gtcttcctcc aaccgccgtc ccgccgccgt ttcagatcac ccgcgccagt
     4621 catgcggtga tcacggtgag cgatctggcg agaagccgcg ccttctatgc agacgggctg
     4681 ggactcgtgg tgagcgacga gaccagtgac accctctacc tgcgtggcgt cgaggaagcc
     4741 gcacatcaca gcttggtgct caaacaggcg tccgccaccc cggtcgccga acgggtcggg
     4801 ttgcgggcgt ttacggaaga agacctcgac cgcgccaaga gtcatttcga caaggctggc
     4861 ctgccggcga aatttgtcga ggcgcctcat cagggacgaa cgctgcacgt cgccgacccg
     4921 gtcggcactc cgcttgaact ctgcgccacc atgacgacga tgccacgcct catcgtggcg
     4981 ttcgacaagc ggaagggcgt cgctccgcag cgcctcgatc atttccagat tgtcgtgccc
     5041 gacgtgccgc gcgcctgcgc gttctatacc ggcatgggct tccggctgtc cgaatatgtc
     5101 tgcccggacg aatccgacga gctgttgttc gtgttcctgc agcgtaaggg caatccgcac
     5161 gacatcgtgt ttgccaacgg gtcgggaccg cggctgcatc acttcgcctt cacggtcgca
     5221 gaatctgcct gcctgttcca ggcctgcgac gtcctgggca gcctcggctt cggccaccgg
     5281 ctcgagcacg gtcccggacg gcacggccca ggtcatgcgc tgttcgtcta tttccgcgat
     5341 cctgacggcc atcgcgtgga gctgtttaac acgcactacc agatgatgga catcgagaac
     5401 cagccggtgc gctggaacgc ctcgtatacg cgccagcgcg gttggggcct gccgccgcca
     5461 cgcaaatggc actttgaggc atcacggttt gccggcgtca cgccgcgcga tccggcgcgc
     5521 atgcccgatc cgtacacgct ggaaaaattc ctggatgagc gggcggacgg gtgagtggcg
     5581 tgaggtccgt ccgcgtaagg tgcacgcaaa aaacaagggg ccgccacatg aagctcgcga
     5641 gttatatggt cgacggcaag gccacgtttg gggtcgtggc aggcgacagc atcatcaatg
     5701 cgacgcgttg cctgggcggc cgattttcaa ccttgcgcca agtgcttgct gcggatgcgc
     5761 tcgacgaggt tgcgcgcgtc accacgggcc aggcccccga tcacaagctc tccgacttca
     5821 agttcctgcc ggtggtgccg gatccgcagc gcatcgtctg cgttggcatc aactaccgct
     5881 cacacgcgga ggagaccggg cgcgaaatct cgcccgcgcc gagcgtgttc ctacgccttg
     5941 ccgatacctt agtcggccac ggcagcgccc tggtgcgccc aaaggtttca gacaagttcg
     6001 acttcgaagg cgagcttgcc gtggttatag gccatggcgg ccgccatatt gcgcaagccg
     6061 atgcgctgaa acatgtggcc ggatatacct gttttgtcga tggcagcgtg cgcgactacc
     6121 aaaagttctc ggtgacgtct ggcaagaact ttcctgccac cggaccgctc ggacccgtgc
     6181 tggtgacgac ggacgaaatc ccggacccga ccaagctcac cttggtgacg cggctcaacg
     6241 gcgcggagat gcaacgctcc ggtaccgaca tgctgatcta ttcgatcccc caggtgatca
     6301 aattcatttc ggattttacc agcttggctg cgggcgacgt tatcgccacc ggaacgcccg
     6361 ccggtgtcgg ccaccgccgc acgcctccgg tttggatgaa ggcgggcgac gtcttggaag
     6421 tggagatttc cgggatcggc acgctgcgca atccagttgt cgacgagtga actgccccta
     6481 aagcgcactc aagctcagcc tcacacgaat ctgaccttaa cctgacagga gaattaacct
     6541 gacaggagaa tccgcgtcgc cggcgctgag taccgtttga tctaagtcaa tgacgtgttg
     6601 cggtaacaca cgcattcctt gtcaaggtcg atgtcgagta ccggcgatac acgtcatcaa
     6661 ggtgcccaag gcatcgccgc actcgattag ccgcaatttt gccgcccgct gtcgctgcaa
     6721 aacgctaaaa catcgaggtt atctaattaa aatggcgaat tcaaaacgac tcgcgggttt
     6781 aatcggccct acccttatcg tgatcgccat gtcaaaagcg ctgaactttc gcattttagc
     6841 aaccgatgtt attcctctca tctatctcgt tggcatatta ttgtttgctt ctggcctttc
     6901 aattgttagt gcccacaaca tctggatccg tcgttggccg gttttgataa ctctcctggg
     6961 ctggtttttt attttcagtg gcctattctg gatgttcgct ccggagattc aactgagcct
     7021 tcaagatacc cccatttacg gagtgttcat cgttgacctc gcccttctcg cgattggact
     7081 ttatttgacc ttcgaagcct attggacgag caggtagttc ggcgatttga cactcaaccc
     7141 ggcatcccct aaaacccgcc cgttgcgcgg gccttgtggc ccgcgtgacg tttcgcgacc
     7201 cgtggttccc gccttcgctt gaggcgcggg cctgtcggtg ccggagggcc ggcgcagagg
     7261 agggcgcgat cctcaaaacc taaacataat caaccggctg cgctgatcgg cgcgagtccg
     7321 caatgaggac gcgaatgtca aagcgagttg aggcgaagca taagctcgat cgccgcatgg
     7381 gccagaacat ctggggccgc cccaagagcc ccgtcaatcg ccgcgaatac gggcctggcc
     7441 agcacggcca gcgccgcaag ggcaagcttt ccgacttcgg cgtgcagctg cgagccaagc
     7501 agaagctcaa gggctattac gccagcattt ccgaaaagca gttccgcggc atctatgcgg
     7561 aggcaatccg catgaaaggc gattccggcg ctaacctaat cggcctattg gagcgccggc
     7621 tcgacgccgt ggtctaccgc gccaagttcg tgccgaccgt gttcgcggcg cgccagttca
     7681 tcaatcacgg ccatgtcaag gtgaacggcc gccgggtcaa catcccaagc ttccaggtga
     7741 aggtcggcga cgtggtcgag gtgaaggaca agtccaagca attagcactg gtcctggagg
     7801 ccaccggcct cggcgagcgc gatgtgccgg actatgtcga ggtcgaccac aacaagatga
     7861 ccgcgaagct ggcgcgagtc ccgaccctca ccgaggtgcc gtatccggtg cagatggaac
     7921 cccatctggt agtggagtac tattcgcgct gacgctgcct gagagcgtcc tgcccgccgt
     7981 cgcaaacatg cgggcgggac gcccgcgctc cagctcgatc aggcttgcgc gctttcctta
     8041 acggccagcc ccttttcctt gagcaggccc tgcaactcgc cagcctggaa catctcacgg
     8101 acgatgtcgc atccgccgac gaattcgccc ttcacgtaga gctgcgggat ggtcggccaa
     8161 ttggaatagg ccttgatgcc gttgcgcaag tcgtcgtttt cgaggacgtt gagcccctta
     8221 tagggcacac cgagatagtc gaggatttgc accacctggc ccgaaaaccc gcacatcgga
     8281 aactgcggcg tgcccttcat gaacagcacc acgtcgttcg ccttcacttc attgtcgatg
     8341 aactgctcga tgcccatggc ttaccttcgc taggtttgtg gccccaacgc aacctcagcc
     8401 gcgccgggca tggggagtac tccgccattg cccccaaaat cgtgtgtttg cgggggaaac
     8461 gcaagggcgc tgcctgcgat tcgtcctccc atcaccctcc cggcacgccg gtctgcaatg
     8521 caagcgcatg gagcttgccc cccatttcgg ccttcagggc ctcgtagacg agctgatgct
     8581 gctgcacccg ggacttaccg cggaaagcct ccgaaagcac cgtcgccgaa tagtggtcgc
     8641 cgtcgccggc aagatcgcgg atcgtcacct cggcatctgg gatacgcgcc ttgatcagcc
     8701 gctcgatatc gtgggcctgc atcggcattg cgatctcccc tgttcttttg cggtccccgg
     8761 agcatgccga atctcttaga atttgcgtga attcgatacg agagtcagca acttccaagg
     8821 atcacgtgca tctcagcgat ggccgcccga catgtattga ggaagccaac gttcgaattg
     8881 ctcgcgcaat atggcgacca aaatgggacg ttgggccggt agcgtcaatg tctctccacc
     8941 agtggtgccg atccggcgca ccggaatact ctgttgggcg gctaggatga gcacgtcggc
     9001 cacgtcatct ttgcggaccg tcacgacata gcgggcctga tcctcgccga accagagggc
     9061 cgcatcgagc tgctcggatg gcggcgtccc agaagcctcc cgcagatcag cgccgatgcc
     9121 cgccgcgata gccatctcgg ccactgccac cgcgagacca ccatcagaga cgtcatgaac
     9181 ggcggtcgcg atcttgcgtt cgatcaaggc gcggacgaaa tcgccattgc atctctcggc
     9241 tgcgagatca accggcggcg gcgccccttc ctcacggccg cagatgtcgc gcagatagag
     9301 cgactgaccg agccaacctt gcgactggcc taccagcaga atggcttcgc cagcggcctt
     9361 aaaggcgagc gtcgccgagc cggtgaaatc cgcaagcagc ccgacggcgc cgatcgaggg
     9421 ggtcggcagg atcgccctgc cattggtctc gttgtagagc gatacattgc cggatacgac
     9481 tggaaaatcg agcacccggc aggcttccga aatgccgcgc acgcaaccga cgaactgccc
     9541 catgatttcg ggccgttccg gattaccgaa gttgagattg tccgtgatgg caagcggcgt
     9601 cgcaccaacc gccgtgagat tgcgccacgc ctccgccacc gcctgcttgc caccctcgaa
     9661 cggatcagcc tcgcaatagc gcggtgtcac gtcggtggtc agcgcaagcg cggtcggacc
     9721 gtcattgacc cgcaccacgg cggcatcgcc accggggcgc tgtacggtgt tgccgaggat
     9781 gacgtggtcg tattgctccc acacccaacg cttggagcag aggtccggcg atccaatcag
     9841 cttttccagc gcatccgcga tcggcatcgg cggcacgact gtgggcgcat cgacgaccgc
     9901 tagcttcgca ggctcgacga aaggccggcg gtataccggc gcctcgtcgc ccaattcctt
     9961 gatcggcagg tcggccatca cagcgccgcg gtgccgaacg ataaagcgct tggtgggcgt
    10021 ggtctcgccc accaccgcga aatcaagccc ccatttgcgg aagatcgcct cggcctctgc
    10081 ctccttttcg ggcttgagca ccataagcat gcgctcctgg ctctccgaga gcatcatctc
    10141 ataagcagtc ataccggttt cccggcacgg caccttgtcg aggttgaggg tgacaccaag
    10201 atcgcccttg gcgcccatct cgaccgccga gcaggtgagc cccgccgctc ccatgtcctg
    10261 gatggcgatg acgcaaccct tggccatgat ttccaagcaa gcttcgagca gcagcttttc
    10321 ggcgaacggg tcgccaacct ggacggtggg ccgcttctcc tcggaattct cgccgaactc
    10381 ggccgacgcc atggtggcgc cgtggatgcc gtcgcgacca gtcttggagc cgagatagac
    10441 gatcggcatg ccgaccccag aggcagctgc gtagaagatc ttatcggtct cgaccaggcc
    10501 gaccgccatg gcgttgacca ggatattgcc gtcgtaacgg ctgtgaaacc gcactgagcc
    10561 gccgaccgtc ggcaccccga aggaattgcc ataaccgccg atgccggaca ccacgccgga
    10621 gaccagatgg cgggtcttcg gatggtttgc atcaccgaac gagagcgcat taaggcacgc
    10681 gatcggtcgc gcccccatag tgaagacatc gcgcaggata ccgccgacgc cggtcgcggc
    10741 accctgatag ggctcgatgt agctcgggtg gttgtggctc tccatcttga acacacaagc
    10801 aagcccgcca ccgatgtcga tgacgccggc gttctcgccc ggcccctgga tgacgcagcg
    10861 tcccgcagtc ggcaggccgc gcaggtagat cttggaggat ttgtaggaac agtgctcatt
    10921 ccacatggcc gagaagatgc caagctcggt aaagctcggt gcacggccga tcaactttag
    10981 gatacggtca tattcgtccg gcttcaggcc atgttcggcg accaggcgag gcgtgacttc
    11041 aggttggttg gggagcattc aatatccaaa aaaattgtga tcattcagcc gcgcagcgca
    11101 gcttgcgcca tggaaatcca ttgcgcttgg accttgcggg cgaatttcgg cgctcgactc
    11161 atccggcgca ccacgtcagc aagcaccgcc tgggcgtcgg cttcgcggcc gaccttgcgc
    11221 aaggccaggc cgtatcggac ccgaggctcg atgccgacat aataaccgga cacggcctga
    11281 tattcctcga tggcctcgtc cacccggcca tcctcgtcca aggcgcgcgc atagagcaga
    11341 tgcccctctg cggattggta gtccggccat cgctgccgca gatcgtcaag tgtggccttg
    11401 gcgcctttga accggccctg gccgaactgt gcccgtgccc ggccgagtgc aaaacccgga
    11461 tcgtccccca agggctggcc cagaatggcg tcatattgaa tttcggcctc gtcaaacttg
    11521 cccagcgcca agcattcctc ggcgagagct tgccgattgg cgatcgtgtc cgcgatttcg
    11581 acctgatcct tgagagcccg gtacgtcttt tcgggattaa gcgccttgct gacgcgccgg
    11641 cgcgcatctt gcccctgata gctgccgagc cattcgggga tcagttccac aaccacgtag
    11701 gcgatcgcac ccgcaaccgg aatcatcagg ataatataag cccacgggga gaaccgtccc
    11761 gtcttggccg catggacgat aaggctgacg tcgatcgcca gcagcacaat ggcgagcaga
    11821 ggcattaaag gcattccgaa tggcgcatcg accccaatct gcgcgagccg gtcggtttat
    11881 cgactgaata cgacagaaat tcaatttcaa aaggatggcg tcaaacctaa attttcgcgg
    11941 ttgcttaggc ggcacggctc aagtgctcga caagtccttg gaacagtcca cgcccgtcgg
    12001 tcgagccgag ggccgcctcc acgtgatttt ccggatgcgg catcatgccg agcacgttgc
    12061 cgcgctcact cacgatgccc gcaatggcat tggtcgcccc gttgaagttc catgcgggcg
    12121 ccagtgtgcc gtccggagag gtgtaacgaa acaccacacg gccgtcgccc tccagccgcg
    12181 cgatggtgtc ggcatcggcg aggtaattgc cttcgccatg agcggtcggt acgcaaatca
    12241 cctggccggc attgtaaccg ccggtgaacg gcgtgtccga acgctcgacc cgcagataga
    12301 cgtcccggca aatgaatttg agccgcgcgt tgcgcatgag cacgccgggc aacagccccg
    12361 cctcgcagag aatttggaag ccgttacaga cgccgagcac caggccgcct ttcgccgcaa
    12421 aggcccacac cgcatccatg atgggcgcgc gcgccgcgat agcgccgcaa cgcagatagt
    12481 ccccatagga aaacccgcct ggcaccacca cgaggtcggt cccggccggc aatgcggtgt
    12541 cggcgtgcca caccatagcg ggctcgcggc ccgatacgag cttcaacgta cgcgccatat
    12601 cgcgctcgcg attgatgccg gggaagacga cgacggcggc tttcatgcca cctcgacgat
    12661 gtcgaggcgt cctatgcgct cgaggcgggc atcttggccg gtcaacatgg aatggatatc
    12721 atgaacatcc tgttgcagcc cgatcatatg actctgcatg gcgttgcgcc tgacattggt
    12781 ctcaagccac cttcattcca gccacgtccg actggagctg cttgaagact tcgtacatcg
    12841 actcatcaac gatgtcggct atcaccaata atccttaacc caatatttca acgttgtagt
    12901 tctcgatcac ggtattcgcc agcagcttct cggcagcctc cttgagcttt gcttcggcac
    12961 cggcgctgtc gctatcggca atctcgatgt cgaagacctt gccttgacgc acgctcgcaa
    13021 tgccggcgac gcctaacgat ttaagcgcac cctcgatcgc cttgccctgc ggatcgagaa
    13081 tgccggattt cagtgtcacg gtgacttggg ctttcatgga ctgccccgtc cgacgaccat
    13141 gggtggctcc aaaaagtcaa cttttcacca ggaccggccc gatgccctgc ggccgctcgc
    13201 cttcgctcat gataccaagg cgtttcgcca cttccgtgta ggcttccagc agtccgccga
    13261 gatctcggcg gaagcggtcc ttgtctagct tttcatttga cttgatgtcc cacagccggc
    13321 acgaatcagg cgatatctcg tcggcgacca cgatccgcat catgtcgttt tcccatagcc
    13381 gcccgcattc catcttgaaa tcgacaaggc ggatgccgac gcccaggaac agaccggaca
    13441 ggaaatcgtt gaccctgatg gcaagcgcca tgatgtcgtc gatctcctga ggcgtcgccc
    13501 agccgaaggc tgtgacgtgc tcttccgaca ccatcggatc gccgagcgcg tcgttcttgt
    13561 aatagaattc gatgatggaa cgcggcagct gcgttccctc ctcgatgccg agccgttgcg
    13621 acagcgagcc ggcggcaacg ttgcgcacga cgatttcaag cggaatgatc tccacctccc
    13681 ggatgagctg ctcgcgcata ttcagccggc ggatgaaatg cgtgggcacg ccgatatcgt
    13741 tgaggtgctg gaacacgtat tcggaaatac gattgttcaa gacgcccttg ccttctatca
    13801 cctgatgttt tttcgcattg aaggcggtgg catcgtcctt gaagtgctga atcagcgttc
    13861 ccggctctgg tccttcataa agaaccttcg ccttgccttc gtaaatacgg cgacgtcggc
    13921 tcattggagt gtaccgtggc ttgagaaaat ccatgatgtg ccgtggctcc gtttcgtgtt
    13981 caagggctcc gcggcggcgg atgactcggt gcaacgcgac tcaaaacacc gcgcgctcaa
    14041 ctctccacca cgaccaagct agcgcaccca cgtgcacagt acaattgaca taacctcacc
    14101 ttagcattcc cgcaacggcg atctttcgat ttcagtcaag ttgtcttgac gggcgcttag
    14161 cgttatgcaa ggcgacgagc aggacgaaaa ttcaaaatac cgtagcagca acgaggcaac
    14221 aatatgagca ccttcgacaa gcgcgaggaa ggtttcgaga gcaaattcgc gcatgaagag
    14281 gaacttcggt tcaaagcgca tgcgcgccgc aacaagctcg tcggcctgtg ggccgccgaa
    14341 aagctcggcc ttgccggcgt ggcggcagag acctatgccg caaatatcgt caccgccgat
    14401 ctcgaaaatc ccggtagcga cagcgtgttc agcacgctgc gcaaggactt cgacgacaaa
    14461 ggcgtggcgc aatccgacca ccaaattcgc cggaccatgg aggaagcgat ggcgagggcg
    14521 gtcgcggaaa ttcaggccgg ccgatagggc caaaggcgcc ggggcgctaa tcccggaatt
    14581 gcctcatgta tggcgcccgc cgcgatatac ggcgtctatg gcagcggccg tgaattgcct
    14641 gcacgcgcaa tggtgcgtgc cggacgcgta gggatcgcca caatgcttgc ggtggactta
    14701 gggtcagcct gcgggcgacg caacagcgcg ttaccggggg ccgctttggg tttcggcggc
    14761 gtgggtgtgg ccggcgcatc cgctgatggc gtcgaactga aggaacccgt ttccggatag
    14821 cgcaagcgca actcgcgcag aaagccatcg agagtatcga tcgaggcgat ccggcgcacc
    14881 acgtcgcgaa attcatcgct ggccgccgcg agcggcgacg ttgcaacttc gaacgcgcgg
    14941 cgatccggac cttccatcat cttggccgca aatttctctt gaaaccgcgt gagtccgatc
    15001 gtgtcgtcat caatcgcgta gccgatcgcg gcccgcagca gatcgatgcg ttcggggtcg
    15061 gtcaggggat cgaaattctg ccacctgtcg ccataaagca gttcgatttg ttcggctgcg
    15121 tcgcgccaac gcttggccgc ccaaaaggtg tcggcgcgca cacggatggc ttcgcggccg
    15181 tctagattcg aaatgatgtc gatcgccaac tcgtggcgac cggtgtccga tagagcccgc
    15241 gcctcgatca gcaggcgctg gttgcgcaac gcgttggcaa tgtcggaatt gcggctggac
    15301 cgcagcgttg ccagcgcctt atcaggcttg cgattcatca gatagatgac ggcgagccgc
    15361 atcgcgacct gagcgcgtgc cgccccctgc agccggtgat cgacctggtg ttgcagcaac
    15421 tcggcggcct gatcgagaag atcaaccgat accaaccgat cggtcaggtg gcggatcatc
    15481 tcgtcacccc ggcgcccgat cggcgtcaac tcgcggaaat cgtaaaacag tgccaacgcc
    15541 tcgaccgctg ggatggaatc gcccttgccg gcaaggaaca gtgaatcgaa ggtggcagca
    15601 gcctcgtcct gaatacggcg ggtcaattcc gaattgggat gcgctttgaa ggccgtccgc
    15661 atgatatgga aagcctcacg gtaacgcccc tcgtccgtat aaaggcgagc gagaagctgc
    15721 agcgcttcaa tttcagtatc gtctccccgc cagaatgtgg tcaagctctc gagttccgaa
    15781 ataacatcag gcttcttcat ctccccgagg ctgtaacgca gcgcaatgtc gtgcaggcgc
    15841 ccacgcgccg cagcgccacg gtcggccgaa tccgaggctg tgcgataggc tgtgagcgcg
    15901 tcctcattgc gcccaaggcc ctcggcgacc cggccggtca acaccgcaat acgcggctcc
    15961 agttccttgg gggtcccaat cgtgtcgaaa ttgttgagct tgtccgcagc cgcggcgaaa
    16021 tcatgggttt cgatcgaggc tcgcgccgac tcgacgagga ctcggcgctg gagttcgacc
    16081 ggcagcgctg gaatcgcggt ttccattttg tggaaagcct cgttcgcttc gggccatttg
    16141 ccgagcttgg cgaaggcaag tccacgccac aacagcgcat catgattatc cccgacgatc
    16201 ggactggcga gatccgcaag cccttcttcc gctcgcccca tcatgatctt ggcaatggcg
    16261 cgcatgacaa gggccgaggc atcctcgacc gatggatggt tttcgctgag cgccacgtcg
    16321 agcacgccct tcgcctcctc gtacatgtcc cgggcaaggt aaaatcgcgc tagcgctaag
    16381 cgcggcatca ggcgcttgtt ctcggccgct ccggcggcgg ccgtgatcag gttcgtccgg
    16441 cgctcgacga agtccgcctc ccggtcaaag ccccaggcct ggggatcgat aaccgtcgtg
    16501 tgaggtccgt tgcgtcgtcc aatctggttg gcggccgaca gggcgaggcc ctgcggccgc
    16561 gacatcacca ccttgtcgcc ggagagttcg acgtccaagt cgtcggcgaa ctgctggatc
    16621 acgatgccat gtgtcgaagc tagcaggcgg aactcgacaa aatcctgatc cctgagaaag
    16681 ccgcgggccg gcgcgaagcc ggtcaccacc aggagcgtgt cgccagcgtc cggatcaggg
    16741 atccgatgca ggaattgcgg ccgatcgaac gccgcaattg cggtcgagtg cgacactccc
    16801 atcgtgttgc ggacaatgac gagcggaatc gtcggatcga gcaccgtatc accgattgcg
    16861 accgtccagc tgtcgtccgc ggcgctgagt gatgtcaggc gcggtcgttc gaacttgatg
    16921 cgaacgactt ggtaaccggg gccactgaag agggatgctc cagcgatcgt cttggtcgga
    16981 tctttctgca acgcatcgat gttgattttg gtcgcagtgt cgagcaccgc ccacagcgta
    17041 tttgcgcggc gaaacacggc gcccgaggtt ggagccgaga atggaaaaac gagcttaaga
    17101 ttatcgctct gacgtcgcat ctcgaccttc acagcgccgt tcggatcggc cggcggagcg
    17161 tcggttgggg ccgcagcctg cggtgccaat gctggcgaag atggttgcgg ctgcgcggcg
    17221 ctatccggga tggtacgctc ggccggcaat tccccggccc tcatgacgtc tgtgggccgg
    17281 ggggcggccg gtcctgcggc cgatcgattc gcggcgtcga tctgtttgac cggatcgaat
    17341 gtcatgctcg gtggtgacat ttcaatcggc gccgcgaggt tagcggcggg ccccgccatc
    17401 ggtaataccc cgccggcctt accaaggtcg ccagaagggg cgttaggagg ggcgttattc
    17461 cttgccgcat ccttgccatt gtcagggacc cgggccggaa tcgtggacgg cacttcgaga
    17521 ccgcccaatg ttccgccttt cggcggtgcc ggatctgcgg tagcgcccgg catgcccgtg
    17581 tcgccgcgtt tgtaggccgg gacggcggcg gcaacatcga cgacataact gttgtcttcg
    17641 cggaaagtgc ggacatccac cttgccgatg aaggtgaact tgacggtcgt ggtctgctcg
    17701 tcggtttcgg cgtccagatg ctcgatcggt gccggcaacg acgccttggc gtcggcgaga
    17761 tcgaacttga gcggcgcatc caatttcaga tctaactttt cgccgttgcg ttcggccgtc
    17821 actgtgacga gatcgggcag ctcaaataca tagcgcgaaa agttgggctg atgggcgacc
    17881 cggacgcggg tcgtcaccat ctgcttttgc aattcgagct gtcgcatctg gcgttgacgc
    17941 cgctccgctt ccttaaccct gcgggcgagt tcctcgacga catcagaagg cagcggcggt
    18001 ggcggccctt tccagccgtc cggcagtaga tccacgaaca ggcgatcatt tgcctgcatg
    18061 gaatgcaacg tcagcttgcg tgccagcgcg atgcgcaagc ccctgccgtc cggatcgcgg
    18121 cgggcggcgc tcacatatcc ggccgcagcg gcgttgagcc ggtcggtcga agcctcaacc
    18181 ggaacgttga agccgatgac taggatgcca ttcgacatcc ggacattggc atcaacgtcg
    18241 ccgctgaatc gatagacgat acgggcatag ccgccgctgg tatcgactga aatttccgcc
    18301 ggaacctttt gagccaaggc agtggagcca cccgccaccg cacaaaccag cagcactgca
    18361 ccgagttgcc agccgcacgc gtacaaggtc gcaatgcgtc gtgcctcaac atgtcggaca
    18421 gctgcccatc gccgagccga tgaacgtgtc accgcccgac agaccgcgga aattgccgtc
    18481 tgggcggcca tgaacaacac gggcgtacgc tccttcggca cgccaactca tacgaggcgc
    18541 atcgccgggg agcgtagtcg cgggatttta acgagcggtt aacatcgcga agataattcc
    18601 caaatgaaat caacatagtt acgcgatcct gggcaccttc ttcagccggc ttaggcactt
    18661 gctgttcatc atccgtcctt cagcttcttc atcgcggcga ccgaaagacg ccgttggtca
    18721 gctgcggccg tgtagcgctc cacctcgcgc aaggtctgat gtccgctcac gacggatatc
    18781 tctttggccg atccgccacg ctcagcgagc cgccgaggca tggccttgcg cagcccaatg
    18841 cgggacgcac tccggaccaa ggcctgcggc cttcgctgcg cgtttcatca ctttgcagcg
    18901 cagtgcgcct catggcgcgc ccgtgctcat cgccgatcag atgcggttgc caccgaagat
    18961 gccgagcgcg acgccatctg ccgagtgctt gccaatgggg gcaactgcgc gcggtcctta
    19021 agccccagtc cagataggtt gagcatcatc tgctgtttcg ccggggtgat gcgattaatc
    19081 accgagaaca ccgcatttct tgcagcgcgc ttgaagctgc cacgtaccgt ggccagtccg
    19141 gtcagacgtc cggcaagcgc aa
//
LOCUS       DATILV010000376         4613 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3409196, whole genome shotgun sequence.
ACCESSION   DATILV010000376 DATILV010000000
VERSION     DATILV010000376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4613)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4613)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4613
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3409196"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1211)
                     /gene="lptD"
                     /locus_tag="VLJ17_08525"
     CDS             complement(<1..1211)
                     /gene="lptD"
                     /locus_tag="VLJ17_08525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0010033 - response to organic substance
                     [Evidence IEA];
                     GO_process: GO:0061024 - membrane organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly protein LptD"
                     /protein_id="HSV23059.1"
                     /translation="MLLIFSAATLFGVMDCRRALAQTPFLTFQNQLRPTPTGKSVTAK
                     PAPNAQMLVQADEIRYDYNNLLVSAVGNVQIYYNGATVEADKVTYDQRSKRLHAEGNA
                     RLTEADGKVSYGQLLDLNDEFRDGFIDSLRLETPDQTRMAAARADRTNSNYTVFQAGV
                     YTACEPCRDDPRRPPLWQVKAARIIHNESEKMMYFEDARIEFFGVPLAWMPYFSAPDP
                     TVKRKTGFLMPIVSTSTAYGFGIETPYYLALAPNYDATISPRITSTQGPLLRGEWRQR
                     FEEGDLTIRGAGIDQLDKDKFIRSDGTVTPGFRDWRGSFETSGRFNLSPQWVWGFDAV
                     ALSDRTFFQDYKIKPLEATTIIDPLLNTPTEAVSQIYLTGRGDRSYFDMRAIHYYGFS
                     ESDVQGTLPNIL"
     gene            1989..3485
                     /locus_tag="VLJ17_08530"
     CDS             1989..3485
                     /locus_tag="VLJ17_08530"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HSV23060.1"
                     /translation="MAKDLKLGFAPFRAPSKGVLIVFCDESQKIGAATRKILGKAADS
                     VARAAAAEHFTGKSGAALDVVLPANLKVGRLTVIGTGKTGAFKSKDFLKLGGAAAGKL
                     PAAGGDAMVVADLPGGPMGPDAAADLAAGARLRAYKFDRYKTRRKEGEEKQGTVDLTV
                     AVANPPAAMRTWRSREAVADGVVLARDLINEPANVLYPEEFARRGGRLRKLGIVVDVL
                     DERAMKRLGMGALLGVGQGSTHESRVVIMRWNGGKRGASPVAFIGKGVCFDTGGVSIK
                     QAAGMEDMKGDMAGAACVVGLMHALAARKAKVNAVGAIGLVENMPDGNSYRPGDILRT
                     MSGQTIEIINTDAEGRLVLADVLHYVNLKYKPKFMIDLATLTGAIMVALGQEHAGLFA
                     NDDELSGRLIAAGEATGERVWRMPLAPEYDKLIDSKFADMKNTGGRHGGAITAAQLLA
                     RFVGKTPWAHLDIAGTALGSPQSEINKSWSSGWGVRLLDHLVAEHYEG"
     gene            3488..3940
                     /locus_tag="VLJ17_08535"
     CDS             3488..3940
                     /locus_tag="VLJ17_08535"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HSV23061.1"
                     /translation="MTEFLFYHLQAQPVEKVLPVLLEKSVERGWRVVVHTSLEERVDA
                     LDAYLWTFRDDSFLPHGTFREPTAADQPVLLTVKDHNPNAATVRFLLDRAPVPANVDE
                     YDRIVLLFDGDDDEAVAEARDRWQAAKARGLAVTYWQADDSGRWQRRA"
     gene            4095..>4613
                     /locus_tag="VLJ17_08540"
     CDS             4095..>4613
                     /locus_tag="VLJ17_08540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23062.1"
                     /translation="MPVVVRRISGRRVLVTGVAIVALASGVAACGSVQNVMPDPANFR
                     LPDRSVFLPTNSSAYTRSVSADGPVGPADFVDGEGLCAGAAPAASDAASTPRGVSLEM
                     TECEVVRALGKPQAVEFTPQADGQRRTSLTYAAGERAGIYQFVGGRLKGIERGNEPPP
                     PAVAKKSPAKKPK"
BASE COUNT          929 a         1351 c         1460 g          873 t
ORIGIN      
        1 agaatgttcg gcaacgtacc ttgcacgtcg gattcggaaa atccgtaata gtggattgcc
       61 ctcatgtcga aatagctgcg gtcgccgcgt cccgtaaggt agatctgtga tacggcctct
      121 gtcggagtat tgagcaaagg atcaataatc gttgtcgctt ctaacggctt aatcttgtag
      181 tcctggaaga aagtccggtc ggaaagcgca accgcatcga agccccaaac ccattggggc
      241 gacaggttga aacgcccgct cgtttcgaag ctgccgcgcc aatcacggaa acctggcgtg
      301 acggtaccgt cgctgcgaat gaatttgtcc ttgtcgagct ggtcgatgcc ggcaccgcga
      361 atggtcaaat cgccttcctc gaaacgctga cgccattcgc cgcgcaacag cggaccctgg
      421 gtgctggtga tgcgcggcga aatggtggcg tcgtagttgg gagccagcgc caagtaatag
      481 ggcgtttcga tgccaaaccc ataggccgta ctcgtcgaca caatcggcat caggaaaccg
      541 gtcttgcgtt tgacggtcgg atcaggtgcg gagaaatagg gcatccaagc gagcggaacg
      601 ccgaaaaact cgatcctcgc atcctcgaag tacatcatct tctcggattc gttgtggata
      661 atgcgcgccg ctttgacttg ccacagcggc ggcctacggg gatcgtcgcg gcaaggctcg
      721 caggccgtat agacgccggc ctggaacacc gtatagttgg agttggtgcg gtcggcgcgg
      781 gccgctgcca tccgggtctg gtcgggggtc tccaggcgca gtgagtcgat aaagccgtcg
      841 cggaactcgt cgttgaggtc gagcaactga ccgtaactga ctttaccgtc ggcttcggtc
      901 agccgtgcgt taccttctgc atgcagacgc ttgctgcgct gatcgtaggt aactttgtcg
      961 gcctcgacgg tggcgccatt gtaatagatc tgaacgttgc cgactgcaga aaccagcagg
     1021 ttgttatagt cgtatcggat ctcgtcggcc tgcacgagca tctgggcatt gggagcaggc
     1081 ttggcggtga cgctttttcc ggtcggcgtc ggcctgagct ggttttggaa ggtcaaaaag
     1141 ggggtttggg caagcgcgcg ccggcaatcc atcacgccga acagcgttgc tgccgagaaa
     1201 ataagcaaca ccgccgccgc acgccaagca cggcaaccag atacgggcgg atatgcgctc
     1261 gccgcaccca gcatcaccca taagcctcat tcaccacggc ctatccccgc cttcccaccc
     1321 tgctgttttt acacacaaaa accccactcg accgactcgc tcccgtcgag cctgcctgcg
     1381 attccaccgc cataatggga accaagatac ccgcaaagca tggctgaacg ccacacgaaa
     1441 ctagcctttg aacgccgccg cctccattca actgatccgg tgttgcaaag ttgccaatcg
     1501 acagggctgc tccatcgcca acgcgcccgg ggcgccacca cgtgtggccc ccagcttgac
     1561 acgcaaagtg gaaaggcgtg acctaaaaga cgtgcagcgt ggagaattac ccctgtcgtt
     1621 cccatcgcac aatgcgtccc cacgcgggcc cgttgttcag gggagtgccg gaaggttccg
     1681 gtcgtgcgag atcccctaaa gatgatccta atcaacccgc aaaatggccg tcccaaggca
     1741 aagccgttga aattgaaatc ggaatggtta agagccttca gggcaaccga ggtctcgaac
     1801 ttcgcggcat cggaatgctt ggaatgcggc cagattgccc cccagggtaa tgaacccagc
     1861 aattaacttg gcacaatcag gagccttcca agatcgcccg gcagggcgag cgagcggccc
     1921 atgtaagcgc cccatgtaag cgccccatgt aagcgcccca tgtaagcgcc catgtaaagg
     1981 acattgcgat ggcgaaggat ttgaagcttg gatttgcgcc atttagggcg ccttccaaag
     2041 gagttcttat tgtgttctgt gatgagtctc aaaaaattgg tgccgccacg cgcaaaattc
     2101 tgggcaaagc cgccgattcg gtcgctcggg cggctgcggc cgaacatttt accggcaaga
     2161 gcggcgcggc cctcgacgtc gtcctgccgg ccaatctcaa ggtagggcgt cttacggtga
     2221 tcggcaccgg caagactggc gccttcaagt ccaaggactt cctcaagctc ggcggggcgg
     2281 cagccgggaa gctgccggcc gccgggggag atgccatggt ggtggccgat ctacccggtg
     2341 gccccatggg gcctgatgcg gccgccgatc ttgccgccgg ggcgcggctg cgcgcctaca
     2401 aattcgaccg ttacaagacc aggcggaagg aaggcgagga gaagcagggc acggtcgatc
     2461 ttaccgtcgc ggttgccaat ccgcctgccg ccatgcggac atggcgttca cgggaggccg
     2521 ttgctgacgg cgtagtgctg gcgcgcgacc tcatcaacga gcctgccaat gtgctctatc
     2581 cggaggagtt cgcgcgccgc ggcgggcggc tgcgcaagct cggcatcgtc gtcgatgtgc
     2641 ttgatgagcg ggcaatgaag cggctcggta tgggcgcgct gcttggcgtt ggccagggct
     2701 cgacgcacga aagtcgcgtc gtcatcatgc ggtggaatgg cggaaaacgc ggcgcatcgc
     2761 cggttgcgtt catcggaaaa ggcgtctgct tcgacaccgg tggcgtctcg atcaagcagg
     2821 cggccggtat ggaggacatg aagggcgata tggccggcgc cgcctgcgtg gtcggactga
     2881 tgcatgcgct cgcggcacgc aaggccaagg tcaacgctgt cggcgcaatc ggactcgttg
     2941 agaacatgcc agatggcaat tcgtatcgtc ccggcgacat cctcagaacc atgtcgggcc
     3001 agaccattga gatcatcaac accgacgctg aagggcgcct tgtccttgcc gacgtgctcc
     3061 attacgtcaa cttaaagtac aagccgaaat tcatgattga tctggcgacc ctgaccggcg
     3121 ccatcatggt tgcgcttggc caggagcatg ctggcctgtt cgccaatgac gatgaactat
     3181 cgggccgcct catcgccgcc ggggaggcga ccggcgaacg cgtgtggcga atgccgcttg
     3241 ctccagaata cgacaagctg atcgattcga aattcgccga catgaagaac accggtggcc
     3301 gccacggcgg cgccatcacg gcggcgcaac tgctggcgcg cttcgtcggc aagacgccat
     3361 gggcccatct ggacattgcc ggcaccgcgc tcggatcgcc gcagagcgaa atcaacaaga
     3421 gctggagctc cggctggggc gtgcgtctgc tcgaccacct ggtggccgag cattatgagg
     3481 gctgacgatg acggagttcc tgttctatca tcttcaggcg cagccggttg aaaaggtgtt
     3541 gccggtgttg ttagaaaaat cagtcgagcg gggttggcgg gtcgtggtgc acacctccct
     3601 ggaggagcgc gtcgatgccc tcgatgcgta cctatggaca tttcgagacg atagcttcct
     3661 gcctcacggc acttttcgag agccaaccgc tgcggatcag ccagtgctgt tgaccgtcaa
     3721 ggatcacaat ccgaacgccg caacagtacg cttcttgctc gaccgcgcgc cggtgccggc
     3781 gaatgtcgat gaatacgatc gtatcgtgtt attattcgac ggagacgacg acgaagcggt
     3841 cgcggaggcc cgcgaccggt ggcaagccgc caaggcgcgc ggacttgccg tgacctactg
     3901 gcaggccgac gatagtgggc gctggcagcg ccgggcctga cccccatccc tacctccccg
     3961 gcaagtggag gagggagaga acgaagctgc gtcactctgc tgcgtcactc ttctgcgtca
     4021 ctatgatgac gcaatgtcgc ggtgcagcga tgctaaggtt cgcagagtgg ctgaatcgtg
     4081 gatgaggctt tgagatgcct gtggttgtgc gacggattag cggtcgacgt gtgctggtga
     4141 ccggtgtggc gattgttgcc cttgcgtcag gcgttgcggc gtgcggttca gtccagaacg
     4201 tgatgccgga tccggcaaat ttccggttgc cggatcgctc ggtctttctc ccgaccaact
     4261 caagcgccta tacgcgctcg gtgtcggcag atggaccggt cggaccggcc gatttcgtcg
     4321 atggcgaggg gctgtgtgcg ggtgcggctc cggcggcgtc agatgccgca tcgacaccgc
     4381 gaggggtcag cctcgaaatg accgaatgcg aggtggtgcg tgcgctcggt aagccgcaag
     4441 cggtcgagtt cacgccgcag gcagatggcc agcgccgaac gagtctaacg tatgcggccg
     4501 gcgagcgcgc cggcatttac cagtttgttg gcggccggct gaaggggatt gagcgtggca
     4561 acgaaccacc gcccccggcc gtcgcgaaaa agtcgccggc caagaagccg aaa
//
LOCUS       DATILV010000377         2370 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2900079, whole genome shotgun sequence.
ACCESSION   DATILV010000377 DATILV010000000
VERSION     DATILV010000377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2370)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2370)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2370
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2900079"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            386..1678
                     /locus_tag="VLJ17_08545"
     CDS             386..1678
                     /locus_tag="VLJ17_08545"
                     /inference="COORDINATES: protein motif:HMM:NF015557.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HSV23063.1"
                     /translation="MTLNQAEAFAIVLGMLGLFAWDRLRYDVVSAIALSVAALTGIIP
                     TEKVFQGFASPVIIIIASVLVIGRAITSSGIVEAVMRPLLHATRTTSSQVAMLTACVT
                     FLSAFMKNVGTLGIFMPIAIQTARRNERSPSCYLMPLAFGSLVGGTMTLIGTSPNLLI
                     STVRQDVEGRRFNMFDFAPVGFPLAVIAVAFLTFGWRLLPRDRRGTPAPEQRFEVDSY
                     VSEAHVPAGSPLIGKTVGDLERLSDGEISVTAIIRERDRRSIPRANWLLFEGDLVVLQ
                     ADPVILHEVIAKGGLTLAGAEEIASAEPKKEEVEAVEAVVTAESQLIGRTPASLDLRQ
                     RFEVNLLAISRSGQKIRTRLHRTALRVGDVIVLQGYSDALSETLTRLGCLPLAGRNLA
                     LGVKRPQPLAIVVLLVAMVLVAFQVLPVEVAFLSRRWS"
     gene            1675..2160
                     /locus_tag="VLJ17_08550"
     CDS             1675..2160
                     /locus_tag="VLJ17_08550"
                     /inference="COORDINATES: protein motif:HMM:NF013132.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HSV23064.1"
                     /translation="MILLRLLTLKEAYDAIDWPILVMLGCLIPVGGALKDTGADALIA
                     GGLTLVAAHLPGFLAVGLVLVTSMLAAPFLHHAAAVLVMGPVAAAIAASLGYQPDPFL
                     MAVALGASCDFLTPIGHQNNALVMGPGGYHFGDYWRLGLPLSCIVAMLGTALILQFWS
                     L"
BASE COUNT          421 a          720 c          725 g          504 t
ORIGIN      
        1 cgtcgaggag agcggcacct tagttgatga ccgccaaatt caagagggac agcttcggag
       61 agcaggccga cattgtgcgg tttcgatcag gttagaatga cagctgaccc gttgcgcccg
      121 gatatctgaa aatggcacga aaccgaagta tctgacagca gcgcggattt ccgatgctga
      181 agtcagagca gacccagcgc gctcggcgct catcgtcaca tcatgacccc ttccggacat
      241 gctggtccca ccgccagccg agagagacgg tcgccagggc cgagtgtcgt ctgcgcggat
      301 gctgccggta gctattcacc cacctgggct ttatcgtgcg cgttctcggc tcaatcctag
      361 aacagctagt tgacagagac cgcccttgac gctgaaccaa gccgaggctt ttgcgattgt
      421 tctggggatg ctcggcctct tcgcgtggga ccgcctgcgg tacgacgtcg tgagcgcgat
      481 cgcgctctcg gtggcggcac tcactggaat cattccgact gagaaagttt ttcagggctt
      541 cgccagtccc gtcatcatta taatcgcgtc ggtgctggtg atcggccggg cgatcaccag
      601 ctcgggtatc gtcgaggccg ttatgcgacc gctattacat gcgacgcgta cgacctcatc
      661 acaagtcgct atgctgacgg catgcgtgac cttcctctcg gcctttatga aaaacgtcgg
      721 cacgctcgga attttcatgc cgatcgcgat ccagaccgca cgacggaacg agcgttcccc
      781 ctcatgctac ttgatgccac tcgcttttgg atctctcgtc ggcggcacca tgacgttaat
      841 cggcacgtcg cccaacttgc tgatttcgac ggttcggcag gacgtcgagg gcagacggtt
      901 caacatgttc gacttcgccc ccgtagggtt tccgctcgcg gtcatcgccg tcgccttcct
      961 caccttcggc tggcgtctac tgccgaggga tcgccgcggc acgcctgcgc ccgagcagcg
     1021 ctttgaggtc gatagctatg taagcgaggc gcatgtccct gcgggctcgc cgctgatcgg
     1081 caagaccgtt ggcgatctgg agcgtcttag cgacggcgag atctcggtga cggcgatcat
     1141 ccgagagcgt gaccgacgct ccattccaag ggcaaactgg ttgctcttcg agggcgactt
     1201 ggtcgtcctt caagccgatc ccgtcatact gcacgaagtg atcgccaaag gcggcctgac
     1261 gctcgcgggc gccgaagaaa tcgcgagtgc agagccaaag aaagaggaag tggaggcggt
     1321 cgaagccgtg gtgaccgcgg agagccagct gatcgggcgg acacccgcca gcctcgatct
     1381 gcggcaacgc ttcgaggtca atctgctcgc catcagccga agcggccaga agatccgcac
     1441 gcgcctccat cgaaccgcgc tgcgggtcgg tgacgtgata gtgcttcaag gctactccga
     1501 tgctttgtcc gagacgctca cccggctcgg atgcttgccg ctcgccggtc ggaatctggc
     1561 actcggggtc aagcggccgc agcctttggc gatcgtggtt cttctcgtcg cgatggtact
     1621 cgttgccttc caggtgctgc ccgtggaagt cgcctttttg tcgcggcggt ggtcgtgatc
     1681 ttgctccgac ttctgacgct caaggaggcc tatgacgcga tcgactggcc gatccttgtc
     1741 atgctcggtt gcctcatccc ggtgggcgga gccttgaagg ataccggggc cgatgcgctg
     1801 attgccggcg gattgacatt ggtagcggca cacttgccag gcttcctcgc cgtcgggctc
     1861 gtactggtca cttcgatgct ggcggcacct tttctgcacc atgccgcggc cgtactggtg
     1921 atggggccgg ttgcagcggc gatcgcagcg agcctcggtt atcagcccga ccctttcctg
     1981 atggcggtgg cactcggcgc gtcctgcgac ttcctcacgc cgatcgggca ccagaacaac
     2041 gccctcgtca tgggcccggg cggttatcac ttcggcgact actggcgatt gggattgccg
     2101 ctctcttgca tcgtcgccat gctcggcacc gcgctcatct tacagttctg gtctctctga
     2161 ggcggtgata gagccccggt agtgatgcaa gcaggtccaa tcgatgtctg ctcgttgagt
     2221 ctgaacggac ccgttgcgga cattgcctga ttactgttca tgacccgaac cagcccctca
     2281 ggtgtcacgc gaaaccaaaa aaggtcggaa cggggctcta atggggctcc gcaaagtatg
     2341 agctgctgga atcgattgta gtcggattag
//
LOCUS       DATILV010000378        21950 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2134844, whole genome shotgun sequence.
ACCESSION   DATILV010000378 DATILV010000000
VERSION     DATILV010000378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 21950)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21950)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21950
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2134844"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..770
                     /locus_tag="VLJ17_08555"
     CDS             <1..770
                     /locus_tag="VLJ17_08555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003600911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSV23065.1"
                     /translation="AKGAVYNLVSDLDFYRLAEGPFAQAPRKSVDYAVMERTAHAAVL
                     PVNFRWSDIGNWKSVWDVQDHDAAGNVIEGPVEVLNTNNCLIRSEETVLTTVVGLDDI
                     VVVATADAVLVVAKREAERVKELVEQLKARHRNEALEHRRIYRPWGFYQTADIGMRYQ
                     VKRICVHSGGRLSLQKHFHRSEHWVVVRGVAEVTVGDEVRLVHENESVYVPIGAVHRL
                     ANPGKIPLELIEVQVGSYLGEDDILRLDDVYHRHTGA"
     gene            complement(852..2294)
                     /locus_tag="VLJ17_08560"
     CDS             complement(852..2294)
                     /locus_tag="VLJ17_08560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012383565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HSV23066.1"
                     /translation="MPVDFTRRSLLRTAASGGAALAVSAGPSTAQTPARRPNIVFILA
                     DDLGYADLSCYGRRDLSTPHVDRIAAQGTRFTQAYANSPVCTASRVAIITGRYQIRLP
                     VGLEEPISARTDRKIGLPPEHPTLPSLLRKAGYGTTLIGKWHLGAPPLFSPLKSGYDH
                     FFGFRGGSLDYYRHTTGVDIPDLWEEDQQVSQQGYSTDLFGDRAVKVIGDYARGGQSF
                     FLSLHFNAPHWPWEAPGDQAESERLRGRSLFDWDGGSQETYRRMIAALDVQVGRVLQA
                     LEDNGIARDTIVIFTSDNGGERFSDTWPFSGKKTELLEGGLRIPAIISWPERMPAGRV
                     SEQVTANMDWLPTLMAAAGAAPDSAYPTDGMNLLPHLTEGASVVERKLFWRYKALWQR
                     AARIGDWKYLKILDNTFLFNVVDDPLERANLKERRKDIYDRLVSEWNAWNATMLPETP
                     ASSTDNFTGAEMADHLGIKRVTPDPDPELR"
     gene            2494..3075
                     /locus_tag="VLJ17_08565"
     CDS             2494..3075
                     /locus_tag="VLJ17_08565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23067.1"
                     /translation="MRIAKMFFLTGASGSGKSASLPGLRRALPAMDWREFDEFGVPSP
                     CPREWRPLTTERWIEVALENKQRGKDTGVVGGAIMGEILACPSAPRIGDIYVALLDCH
                     DVVRLDRLRKRGAHGATQEMLSWAAWQRVHAVDPQWRQDVICSVQIDAMRWERWTTWQ
                     RGDPRWCVHVLDSTNLTIDQVVDRIVAWVQAKQ"
     gene            complement(3525..4418)
                     /locus_tag="VLJ17_08570"
     CDS             complement(3525..4418)
                     /locus_tag="VLJ17_08570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HSV23068.1"
                     /translation="MDRLEDLRAFVAIIDKGSLTAAARHLGRSLQSVSRSLAAVEREV
                     GIELLRRTTRRSAATEAGLAFHRRVGAALAEIEAAKAEAAKGRSEPAGLLRMTASTAF
                     APLHVVPALRAFLADYPKIEVELDLSDGYVDLVGEGFDVAIRIGELPNSNLRTRRLAD
                     LRRVVFAAPSYLAKHGRPQAPEDLEYHECIVRTAARDGNIWPFLVGGRMKAVRVAGRL
                     RTSGALAANEAALQALGIANAPLWQVKPLVDRGAVELLLTRFEPPPVPLHAVWPATRL
                     LSGKTRVFIDFFTACLKRERL"
     gene            4522..5019
                     /locus_tag="VLJ17_08575"
     CDS             4522..5019
                     /locus_tag="VLJ17_08575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015342773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HSV23069.1"
                     /translation="MPIQIIEAPITGHESLGELREPVQALAQFYRAFNGRDLALMEEN
                     WEASETVAMDNPLGGIKRGWPEIRWVYERVFRGTGRVQVEFHDYTLHVVGDVFYAVGR
                     ERGTFERNGIRLDLAIRTSRIFRRLDGRWRQVHHHGSIDDPQLLNAYQEAVSGARRPS
                     KGAGP"
     gene            5016..5552
                     /locus_tag="VLJ17_08580"
     CDS             5016..5552
                     /locus_tag="VLJ17_08580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020086215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HSV23070.1"
                     /translation="MSRAFTRLAFSPAVKAAQARYGAREHGLRIEEREPANDRLNDDL
                     MSFIAAAESFFIATASQNGWPHVQHRGGPPGFLKVLDDRTLAFADYAGNRQYITVGNL
                     SENDRVMLFIIDYERGRRLKLWGRGAVIDSDPGLLARVIETSYPARVERVIRIDVEAW
                     DLNCRQHFPKLVRALGAR"
     gene            complement(5703..6944)
                     /locus_tag="VLJ17_08585"
     CDS             complement(5703..6944)
                     /locus_tag="VLJ17_08585"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSV23071.1"
                     /translation="MSECDVAVIGAGAAGLGAARRLAAAGLAVKVLEARSRLGGRAWT
                     ARDPSGLPIELGCAWLHSADENELCTIALQSGLTIDKTRPPWRTQINDIGFPPSDQAD
                     FRAALGRLFVRLDEAGEAEVDQPADRLLEPGSRWNALLNATSTYMNGVELDQLSVRDF
                     WRYHDTGVNWRITEGYSRLMTALGAGLDIELDCPVSLIDHAGLRLRIETPRGDLNACA
                     VIVTVPTDVLCAGGMTFYPTLPNKIEAAAVLPLGLADKLYLGLDDAEEFPKDSHLYGA
                     VDRLQTCSYHVRPFGRPLIEVYSGGQFARELEGEGEAAFASFAIGQLASLLGEAIRKR
                     LYPIAATAWARDPYARGSYSHAIPGHADARVTLAAPVDARLFFAGEACAVNDFSTAHG
                     AYRSGVAAAAEVIAALGNRRP"
     gene            7253..9277
                     /gene="hyfB"
                     /locus_tag="VLJ17_08590"
     CDS             7253..9277
                     /gene="hyfB"
                     /locus_tag="VLJ17_08590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit B"
                     /protein_id="HSV23072.1"
                     /translation="MPGIDLPAATGLWCVPGFLGLAGLAVVVGRSRMATSLVYGGALA
                     VALVALGAALTCFLASGPPWTMALPIGLPGIGARFRVDAPSAFFLVIVNLGAATTSLY
                     ALGYGRHEEAPARVLPFYAAFLAGMNLVVFADDAFTFLLGWEFMSLTSWAIVQARHRD
                     PANSRAALIYLVMASFGTLCLLLGFGLLAGPAGGYAFETIRLASHTPLTATLAVVLAL
                     LGAGSKAGLVPLHVWLPLAHPAAPSHVSALLSGVMTKVGVYGFVRIVFDLAGPPNPWL
                     GLVVLMLGGISAAIGVLYALMQHDLKRLLAYHTVENIGIIFIGLGLALAFRANGMNVA
                     AALALTAALFHVFNHSVFKSLLFFGAGAVLVATGERDMERLGGLIHRMPQTALAFLIG
                     CAAISALPPLNGFVSEWLTFQAILVSPDLPQWGLKLTVPAAGALLALSAALAAACFVK
                     AFGVTFLGRPRSSAAIAAGEVDVFSLTAMFLLAAICFLAGVLPGFIIDALSPATVMLV
                     GDMMPRQAALPWLSIVPIGESRSSYNGLVILTFLIASGTLTAMVIHRCATRATRRSAI
                     WDCGFPLDVPQTQYGSASFSMPIRRVFGTSVFNVHERIDMPQPGEIRAGSFRLRVVDP
                     AWRLVYGPLARMVTTVSMSLNQLQFLTIRRYLTLVFCTLIALLVVVAAWR"
     gene            9268..10224
                     /locus_tag="VLJ17_08595"
     CDS             9268..10224
                     /locus_tag="VLJ17_08595"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004119440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit H"
                     /protein_id="HSV23073.1"
                     /translation="MALILDLLLQVVQMVLVVAVAPAVLGVTRKVKARLLRRIGPPVL
                     QPYRDLWKLMHKEAVLAPNASWIYRTAPYLIFAATWVAAALVPSYATGLLFSWSADLI
                     AIVALLGTARFTLALAGMDVGTAFGGIGSSREMMIASLAEPAMLLIVFTVALVAGTTQ
                     LSAVATIFSTGSAGLRVSLGLGLFAFLLVAIAENARIPIDNPATHLELTMVHEAMVLE
                     YSGRHLAVIEAASALKLVLYFSLIICLFMPFGIAGAGAGLSEYARGIVAYLAKLLVLA
                     ALLPIAETSVAKMRVFRYPLFVGSAFAAAALAVFLLFVSKGF"
     gene            10224..10892
                     /locus_tag="VLJ17_08600"
     CDS             10224..10892
                     /locus_tag="VLJ17_08600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007533882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase-4 component E"
                     /protein_id="HSV23074.1"
                     /translation="MSKLLFDVAHLLAGGMLVLSFALLYQDRIAAVINVFALQAIALS
                     LSVAWQALVQDAPHLIVTATIALVVKGFVVPTALHHIIRRMQIHREVEEVIGSGLTML
                     TGLGLVALSILLVQPVGEVSIYVREDLAFALAVILLGLLMMITRRNAITQVVGFMSLE
                     NGLVLAATGAKGMPLVVEISVAFSILIAFIVFGIFVFRIRERFDTVDVSALDRFRGER
                     RDAS"
     gene            10889..12325
                     /locus_tag="VLJ17_08605"
     CDS             10889..12325
                     /locus_tag="VLJ17_08605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit F"
                     /protein_id="HSV23075.1"
                     /translation="MIEPVEITLIIPAIAIPILALVSGYRLGAALNILASALTFGAAG
                     ALLFTEHPRSDLIIIDDFNIFLIILTTFVGFTTSIFSATYLAHEIETGRLTPLFLRFY
                     HAMYQTLMGAMNVALVANNIGLMWVGVEVATLSTVMMVGIYRTPEAIEAAWKYFILGS
                     VGIGLAFFGTILVYLVAQDVVGDGLPAMSWDLLAKTAPMLDAKLLSLAFVFLLVGYGT
                     KVGLAPFHAWLPDAHAEGPTPISAVLSGLLLNVALYVLLRFKMVLAGSTGAVNVGAIM
                     VALGLTSLVFAAFMLYRRRDIKRLFAYSSIEHMGIAAFAFGMGGPLANFAGLLHMTMH
                     SLIKSGIFFAVGHITQVKGTQRIAAISGISVTHPMLAVLFSFGVLAIAGLPPFGMFTS
                     EFMLVSSTFARQPTLSIVLVVGLLIAFGALILRLQDIVFGEPTGQAHPAQASYIPAYV
                     HLTLALIAGIWLPGPVVQWFRSVAMLLG"
     gene            12331..13851
                     /locus_tag="VLJ17_08610"
     CDS             12331..13851
                     /locus_tag="VLJ17_08610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011655038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase expression protein HypE"
                     /protein_id="HSV23076.1"
                     /translation="MDTNAISTILGRLAAVGYHAPWRRFDVDTRTWTAIAESLGEGGA
                     DLLGLWGDANTVHLALRVPPGDPCVISLAIAEGSFPSVGRLHPPAIRLERAVSDLYGH
                     RPAHAPDGRTWLDHGQWGLYAPLGAGIPVPRRDPVDYEFQAVHGHGLNLIPVGPVHAG
                     IIEPGHFRFTANGETVARLEERLGYVHKGIDGLLTNVDLAKAARIVARASGDSTVALS
                     FAFARATEGALGVDAPPRAVVLRGVMAELERIANHCGDIGAICNDAAFALIHAHCGIF
                     RERVLAACDKAFGHRLMMDRIVPGGIAQDIAPGGGAAIIAELDDIAPRFDEIVALYDD
                     TPSLQDRTCGTGHVAGDLVNRWAAGGHVGRASGRDFDARRDLAYPPYRGLAFAVPLYA
                     AGDVDARVRVRIDEIRASLRMVKEWFADLPDGPVLTALPQAAAPREGIAITEAFRGDV
                     LVWLRLGAGGQVARCHVRDASWFQWPLLEAAIENNIVADFPLCNKSFNCSYSGHDL"
     gene            13855..14415
                     /gene="nuoB"
                     /locus_tag="VLJ17_08615"
     CDS             13855..14415
                     /gene="nuoB"
                     /locus_tag="VLJ17_08615"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoB"
                     /protein_id="HSV23077.1"
                     /translation="MRTLLLKSLFARPVTVKAPDAADSGLEELGRTLAAGGRRLFGRS
                     LTIREVDAGSCNGCELEIHALNNSIYDVERFGLRFAASPRHADVLLVTGPVTHNMKTA
                     LERTYAATPAPKWVVAVGDCGCGCGVFEGSYAVIGAVDKVIPVDLHIRGCPPRPIDLL
                     RGLIALVDKAAQARVRGAEDAAQPSG"
     gene            complement(14428..14863)
                     /locus_tag="VLJ17_08620"
                     /pseudo
     CDS             complement(14428..14863)
                     /locus_tag="VLJ17_08620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015687661.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hemin receptor"
     gene            complement(15189..15848)
                     /locus_tag="VLJ17_08625"
     CDS             complement(15189..15848)
                     /locus_tag="VLJ17_08625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23078.1"
                     /translation="MAKQRISYVPLEKMDAQMRKEMERCQHEGTPRPESSAVRAHVPA
                     AFWFFANSWNDLFRNGVVDHAVKELCRLYVSRSVQCEYCGNQRSVKATSSGALIEDDV
                     LDLLNFETSTKHNDRQKAALAYAEAIVWHLQTDDAFWDRLHRHFTEPELVELGCMIGL
                     TLGQQSWLRLLNIEHHEVLPGTSASMAPGYEDASKLAETKARADYWAKSSPDAPTGKV
                     A"
     gene            16064..16618
                     /locus_tag="VLJ17_08630"
     CDS             16064..16618
                     /locus_tag="VLJ17_08630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HSV23079.1"
                     /translation="MSQRFKPLPQHDMTLDQQRVAQAVASGPRGGLRGPFHALLRSPE
                     LADRVRRLGDYVRFESTVPGALRELTILLVARFWSAHYEWNAHRKHAVAAGLDSSVAD
                     AIEVGRRPAKLSTDETLVYDVVTQLLHDKDISDTTFVAASARFGEQMLIELIGTAGYY
                     GLVSLVLNASRTPVAEGGKPLPPI"
     gene            complement(16689..18572)
                     /locus_tag="VLJ17_08635"
     CDS             complement(16689..18572)
                     /locus_tag="VLJ17_08635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HSV23080.1"
                     /translation="MKLSIASVSLSGDLAEKLDAIAAAGFKGVEIFENDLLSFDGTPA
                     DVRKHAAGLGLQIVTFQPFRDFEGMPPESRERVFARAERKFDLMGELGCDLLLVCSNV
                     SPQSFGGIDRVAADLRALGERAARRGMRVGFEALAWGRHINDYRDAWEAVRRADHPAI
                     GLVLDTFHIFARKTDLKPIGAIPRDRIFLVQVADAPLLDMDSLSWSRHFRNFPGQGEL
                     PLIEFMEVLQATDFDGLLSLEIFNDQFRAGSARSVAVDGQRSLLFLFDQLRERSGMAP
                     GKFSALPPRSRCLGIEFIEFAIDENVVPTFEKLLRGLGFVHSGSHKSKAVTRWSQGAI
                     NIVVNAEKEGFAHSFNITRGTAVCAIGLKVNDAAATLARAERLLDKPFRQAVGPGELE
                     IPAVRGLGGSLVYFIDPKSELSRMWDVDFEPTGERCANASLTAVDHISQSMKYEEMLT
                     WVLFYTSLLDLKKTPEQDVLDPGGLVKSLVVQAADGALRIALNASQSARTQASRFLTE
                     AFGSGVHHIALATDDLLATVARLEANGVALLPIPENYYDDLEAKTDLSPARIEQFKSH
                     NILYDHDGSDEFLQVYTRTFEERFFFEIVERRGYRGFGAANAAIRLAAQTRLARHPAV
                     PRL"
     gene            complement(18592..18837)
                     /locus_tag="VLJ17_08640"
     CDS             complement(18592..18837)
                     /locus_tag="VLJ17_08640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014493941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23081.1"
                     /translation="MSSTIASAESAHGKRPLSRPWHGYGFLPGYQPPELIEWERGRTH
                     RPTYWYGGPGFYRGRWNGGGFGPCWTPTPIGPHWNCG"
     gene            19142..19411
                     /locus_tag="VLJ17_08645"
     CDS             19142..19411
                     /locus_tag="VLJ17_08645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HSV23082.1"
                     /translation="MARVVFTPNIQRHVVCPQAEAAGRSVREVLDNAFASHPQVRSYV
                     LDEQAALRRHMTIFVDGRAIRDRVRLSDPVTASSTVYVFQALSGG"
     gene            19414..20514
                     /locus_tag="VLJ17_08650"
     CDS             19414..20514
                     /locus_tag="VLJ17_08650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23083.1"
                     /translation="MNDTILVSTRKGLFWVGRKNGSWDIEQVDFLGDNVSLTLTDPIS
                     GRHFVALDHGHFGVKMHRSTATGWEEIAAPAYPPKPEGVEENDMWGRPLAWSTARIWA
                     LQAGGADEPGVIWCGTLPGGLFRSTNHGDSWELIRPLWDHPKRKQWMGGGADLPGIHS
                     ILVDPHNSKRVWIAVSTGGIWFTEDSGASWTQRGEGMRAEYVPPELTHDPIAQDVHCL
                     AQCLAVPHRMWVQHHNGIFVSSDEGRTFSEITGVEPSTFGFPVVVHPRDPDTAWFIPE
                     IKDEKRIPRDGRLVVTRTRDGGKSFDTLTEGLPQRHAYDVVYRHALALDATGDRLAFG
                     STTGGLWVSEDQGDQWSNVTYTLPPIYAVRFV"
     gene            20695..21354
                     /locus_tag="VLJ17_08655"
     CDS             20695..21354
                     /locus_tag="VLJ17_08655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23084.1"
                     /translation="MDGGDDGEAIALRSLFAGMDAGDEADAICAMNETAIFLRHHELS
                     FRQIVQQIEARGMLLPSKVATAIQLMDSTTLAEAESALAGARRLMRSCGLTFACILGA
                     FQREPTGADEFEQLKCAFQIEVERSRELAAELQFLRARADNLGFPLVSSPFRNFVLVA
                     TLLFGVLLAASIVSTIMDLFRSANATAPTMVRRADANPLPVPRPISNCWRDRSIQGPC
                     F"
     gene            21593..21868
                     /locus_tag="VLJ17_08660"
     CDS             21593..21868
                     /locus_tag="VLJ17_08660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23085.1"
                     /translation="MLTIVAIILADLIVVSLFIYRYRQELGLTVNGSHDKPVVRKRFV
                     GHKPVREDVADDKVQHAQVVTRAGTTANRTSRTARRQAQIGAPRQTT"
BASE COUNT         3928 a         6644 c         6884 g         4494 t
ORIGIN      
        1 cggccaaagg ggcggtctat aatctggttt ccgatctcga cttttatcgg ctcgcggagg
       61 ggccgttcgc gcaggcacct cggaagtcgg tcgactacgc cgtcatggag cgcaccgcgc
      121 acgcggcggt gctgccggtc aacttccgct ggtccgacat cggcaactgg aagtccgtat
      181 gggacgtgca ggaccacgac gccgccggta acgtgattga aggaccggtt gaagttctca
      241 ataccaacaa ctgcctgatc cgttccgagg agaccgttct gaccacggtc gttgggctcg
      301 acgatatcgt ggtggtggcg accgcggacg cggtattggt ggttgccaaa cgggaggccg
      361 agcgggtcaa ggaactggtc gagcagttga aggcgcgcca ccgcaacgag gcgctggagc
      421 atcggcgaat ttaccggcct tggggtttct accagactgc cgacatcgga atgcgatacc
      481 aggtcaagcg aatctgcgtc cattccggtg gacgattatc gttgcagaag cacttccacc
      541 gctcggaaca ctgggtcgtg gtgcgtggcg tcgccgaggt gacggtcggc gacgaggtgc
      601 ggctggtgca cgaaaatgaa tctgtctatg tgccgatcgg cgcggtccat cgcctggcca
      661 atccgggaaa aattccgttg gagttgatcg aggtgcaggt cggcagctat ctcggcgagg
      721 acgatatcct gcggctcgac gacgtttatc atcggcacac tggggcgtga ggtgtcccga
      781 catgcagccc gggttgagcg ccaccaaagc ccgggagcgg cgcaacgacg tggatgggtc
      841 aatccgggcg ttcagcgcag ctcggggtca gggtccgggg tgactctttt tatcccaaga
      901 tggtcagcca tctcggcgcc cgtgaagttg tcagtggaac tcgctggagt ttccgggagc
      961 attgtggcgt tccaggcatt ccattcactg accagccggt cgtagatgtc cttgcggcgt
     1021 tccttcaggt tggcgcgctc cagaggatcg tcgacaacgt tgaacaggaa cgtattgtcc
     1081 agaatcttaa ggtatttcca gtcaccgatc cgtgcggcgc gctgccatag tgccttgtaa
     1141 cgccagaaga gcttgcgctc cacgacgctc gcaccttcgg tcagatgggg aagcagattc
     1201 atcccgtcag tcggataggc tgagtccggc gccgcgccgg cggcggccat gagggtcggt
     1261 agccaatcca tgttcgcagt cacctgctcg ctgacgcgcc cggccggcat gcgctcaggc
     1321 caagagatga tcgcagggat acgcaggccg ccttccagca attccgtttt ctttccgctg
     1381 aacggccaag tgtcggaaaa gcgttcgccg ccgttatcgc ttgtgaagat cacgatggtg
     1441 tcgcgcgcaa tcccattgtc ctctagcgcc tgcaacacgc ggcccacctg aacgtccaat
     1501 gccgcgatca tccggcgata ggtctcctgt gagccgccgt cccagtcaaa caggctccgg
     1561 ccccggagac gttccgattc ggcctgatcg ccgggagcct cccacggcca gtgcggcgcg
     1621 ttgaaatgca gactcagaaa gaacgattgc cccccacgtg cataatcacc aatgaccttc
     1681 acggcgcgat cgccgaataa gtcggtgcta tagccctgct gcgagacttg ctgatcctcc
     1741 tcccatagat cggggatgtc cacgcccgtg gtgtgccgat aataatccag cgagccgccg
     1801 cggaagccaa agaaatgatc atatccgctc ttgagcggac tgaagagcgg cggcgcaccg
     1861 aggtgccatt tgcctatcag cgtagtgccg taaccagcct tccgtagcag tgatggcagg
     1921 gtcgggtgct ccggtggcag accgatcttg cgatcggtgc gggccgagat tggttcctcc
     1981 aagcccaccg gcaggcgtat ctggtagcgg ccggtgatga tcgccacgcg tgaggcggta
     2041 cagaccgggg agttcgcata ggcttgcgta aacctggtcc cctgagcggc gatccgatcg
     2101 acgtggggtg tcgacaggtc gcgccggccg tagcaggaga ggtccgcgta gcccaagtcg
     2161 tcggcgagga tgaacacgat gtttggcctg cgcgcaggcg tctgtgcagt cgaggggccc
     2221 gcggagaccg ccaatgcagc gcctcccgaa gctgccgtcc gcaaaagact gcggcgcgtg
     2281 aaatcgaccg gcatggcatt tgtcccgttt ggctcatgct ggcaacgatt tttgcgtgtt
     2341 gctcaatatc atgtcaatgc tgaaccaaac aaacggccgt agggcgccag gcctcaactg
     2401 gggcggactt tcgcggaccg accgcgcctg ctttgcctgg cgccttcaat ccggggtacg
     2461 cttgctggcg atgcacgacg cgaggcgttt gcgatgagga tcgcaaagat gttcttcctc
     2521 accggcgcca gtggctcggg taagagcgca agcctgccag gactgcgaag agctctacca
     2581 gcaatggatt ggcgcgagtt tgacgaattt ggcgtgccct caccgtgtcc tcgcgaatgg
     2641 cggccgctca caaccgagcg ctggattgag gtggcgctcg aaaataagca acgcggcaag
     2701 gataccggtg tcgttggcgg cgccatcatg ggagagatac tagcatgtcc gtcggcgccc
     2761 cgcattggcg acatttacgt ggctctcctt gattgtcacg atgtcgtccg gttggatcgc
     2821 cttcgaaagc ggggagcgca cggagccaca caagagatgc tgtcgtgggc ggcgtggcag
     2881 cgtgtccacg ctgtcgaccc gcagtggcgg caggacgtga tatgcagcgt acaaatcgat
     2941 gcgatgcggt gggagcgttg gacgacttgg caacgaggtg acccgcggtg gtgcgtgcat
     3001 gtgctcgact ccaccaatct tacgattgac caggttgtcg accgaattgt tgcttgggtt
     3061 caggcgaagc aataacggcc gccaacgaac cctaccgacg ccacttcccg agtgcagcct
     3121 ttcctgaagt ccggttttct aacacggtca taggctccgc cctgccaatg aatgatccgt
     3181 catttgttgg ttctgcgcac tggtaaaaca ggtttgcgag gccgtggagc atcgtgtgtt
     3241 acacggaccc ggtgccgtgc tgaaaagcac agcacgcccg cgacagcgaa agcgcgccgc
     3301 agctgcagca ctttcatgac cacctccctc tgacttgacg cggttaagat cagagtggcc
     3361 cgctctctcg gaagaaccaa ttggaaaagt tacgcgatag ggcgctgtga cagcccttgc
     3421 gttattctac gcgccggctc cgcggcgact aaacttggca gttgcatccg gagcctcttc
     3481 ggagacgggc aggccgcaat ggacgacata aacatttgaa gatctcatag ccgctcgcgt
     3541 ttcagacagg ctgtgaagaa atcgatgaac acgcgcgtct tgccggacag caaccgcgtc
     3601 gccggccaga cggcatggag cggtacgggg ggcggctcga agcgggtcag gagtagctcg
     3661 accgcgccac gatcaaccag cggcttcact tgccagagcg gggcattggc gatgccgagc
     3721 gcttgcagcg cggcctcgtt agccgccagc gccccgctag tgcgaagccg tcctgcgacc
     3781 ctgacggcct tcattcgccc gccgacaagg aatggccaaa tgttgccgtc gcgtgcagcc
     3841 gtgcggacga tgcactcatg atattcgagg tcttcgggcg cctggggccg tccatgtttg
     3901 gcgagatagc taggcgcggc gaaaaccacg cgtctgaggt cggcgaggcg gcgggtcctc
     3961 aggtttgagt ttggcaattc gccgatgcgg atggcgacat cgaagccctc gccgacgaga
     4021 tcgacatagc cgtccgataa atcgagctcg acctcgatct tcggatagtc agccaggaac
     4081 gctcgcaatg ccgggaccac atggagcggc gcaaaggccg tcgaggcggt catgcgcaac
     4141 aggccagctg gctcggaccg gcccttcgct gcctcggcct tggcggcctc gatctcggcc
     4201 agcgcggcgc cgacgcgacg atgaaaggcg aggccggcct cggtggcggc ggatcggcgc
     4261 gtggtgcggc gcaacagctc gatcccgact tcgcgttcca ccgcggccag cgaccgactc
     4321 accgactgca gcgagcggcc aagatgccgt gcggcggccg tcaggctgcc tttgtcgatg
     4381 atagcaacga aggctcgcag gtcttccagc cgatccacgc acattctccc atttgccgga
     4441 agaatgtatc acaatcagcg cgtattatct caaagccata ctagccttat ctcactggcg
     4501 ttgacttgaa aggagcaggc catgccgatc cagattatcg aagcgccgat caccggccac
     4561 gagtcactcg gcgagttgcg tgagccggtc caggcgctgg cgcaattcta tcgagctttt
     4621 aatggccgtg atctcgccct gatggaagag aactgggagg catccgagac cgtcgcgatg
     4681 gacaaccctc tcggcggcat caagcgaggc tggcccgaaa tccgttgggt ttatgagcgg
     4741 gtctttcggg gaaccggtcg cgtacaggtc gaattccatg actacacgct ccatgtcgtc
     4801 ggcgacgtgt tctatgccgt cggccgcgaa cgtggcacgt tcgagcgcaa tggcatcagg
     4861 ctcgacctgg ccattcgcac aagccgaatc ttccggcgtc tcgacggccg ctggcgccag
     4921 gtgcaccacc acggttcgat cgacgatccg cagctcttga acgcctatca ggaggccgtg
     4981 agcggggcgc gccgaccgag caagggggcg ggaccatgag ccgcgccttc acgcgcctcg
     5041 ccttctcacc cgccgttaag gccgcgcaag cccgctatgg cgcacgcgag cacggcctgc
     5101 gcatcgagga aagagagccg gccaatgatc ggctgaacga tgatctcatg tccttcatcg
     5161 ctgctgccga gagtttcttc atcgccaccg caagccaaaa tggctggccg catgtgcagc
     5221 atcggggcgg cccgcctggc tttctcaagg tgttggacga tcggacgctt gcgttcgccg
     5281 attacgccgg caataggcag tacatcacgg ttggcaatct gtccgagaac gaccgcgtaa
     5341 tgctgttcat catcgattac gagcgcggcc ggcggttgaa gttgtggggt cgcggcgcgg
     5401 tgatcgacag cgatccggga ctattggcgc gcgttatcga gacgagttat ccagcgagag
     5461 tcgaacgcgt catccgcatc gatgtcgaag cctgggacct gaattgtcgg caacatttcc
     5521 cgaagctcgt tcgagcgctc ggagcgcgat gaaacgagct tcagatgaaa ggagcttcgc
     5581 gtaagcgtac gcttgagaaa actttcatag gcagggattg aggtttaggt ttccggctgc
     5641 tcctcgatcc gctggagaac gtaggtcgtc gccaattgga gccgagcggg ttgcccgcga
     5701 cgctacggcc gcctgttccc gagtgcagcg ataacctcgg cggccgccgc aactccgctg
     5761 cggtaagcgc cgtgtgcggt cgagaaatca ttcacggcgc acgcctcacc ggcgaagaac
     5821 agccgtgcat cgaccggcgc ggcgagagta acacgcgcat ccgcgtgtcc gggaatggcg
     5881 tgcgaataag agccgcgcgc gtaaggatcg cgcgcccagg cggtggcagc gatcggatac
     5941 aggcgcttgc ggatagcctc gccgagcagg gaagcaagct gacctatggc aaagctggca
     6001 aatgctgctt cgccctcgcc ttcgagctcg cgggcaaact ggccgccgga atagacctcg
     6061 atcagcgggc gtccgaacgg ccgtacgtga tagctgcagg tctggaggcg gtccacagcg
     6121 ccgtagaggt gagagtcctt gggaaattcc tcggcatcgt cgagccccag gtagagcttg
     6181 tcggcaaggc cgagcggcag caccgctgcc gcttcgattt tattcggtag cgttgggtaa
     6241 aacgtcatcc cgccggcgca cagcacgtcg gtcggaaccg ttacgatgac agcgcatgca
     6301 ttcaaatcgc cgcgcggtgt ctcgatgcgc aggcgcaggc cggcgtggtc gatcaggctc
     6361 accggacaat cgagttcgat gtccagcccc gccccaaggg cagtcatcaa acgactatag
     6421 ccttctgtga tgcgccaatt cacgcccgtg tcgtgatagc gccagaagtc gcggaccgag
     6481 agctgatcga gttcgacccc gttcatatag gtgctagtgg cattaagcaa cgcgttccag
     6541 cgactaccag gttcaagcag acgatccgcg ggctgatcga cttcggcttc gccggcttcg
     6601 tcgagccgga cgaacaagcg tcccaacgcg gcgcgaaaat ccgcctgatc gctgggcgga
     6661 aagccgatgt cattgatctg cgtacgccag ggcggccggg tcttgtcgat ggtgaggccg
     6721 gactggagcg caatggtgca caattcgttc tcgtccgccg aatgcaacca agcgcaaccg
     6781 agttcgatcg gaagccccga cggatcgcgc gccgtccagg cgcgtccgcc cagacgactg
     6841 cgcgcttcga ggactttgac cgcgaggccc gccgcagcga gccgccgtgc ggcacccaag
     6901 ccggcggcgc ccgccccgat gacggcgacg tcacactcac tcatggtctg ggttattccg
     6961 ttgcgcacat ccgcgtcatg ccgctggctc gatttattat cacaccagcc cccggtaacg
     7021 accacatccg gaacgccagg gtccgtcaat acctggggac gacgacaagc cgttgtggtt
     7081 cactttgccg gcccgtatta caagacgaag gacatcttgg ccgggcgacc cccacccctt
     7141 acatttggcg tcagtggttc gcttgatcat tgtttttgcg ggctgcggct gagggcgcca
     7201 agcgcctcaa cggttgccac ccgatatcgg ggtgacgggg gacttaaaag caatgccagg
     7261 gatcgacttg ccagccgcca ctggcctgtg gtgcgttccg ggcttccttg gtctcgccgg
     7321 tcttgcagtg gtcgtcggac ggagccggat ggcgacttcg ctcgtatatg gcggtgcgct
     7381 ggcggtggcg ctggttgcgc tcggcgcggc gttgacctgc tttctggcct ccgggccgcc
     7441 atggaccatg gcgttgccga tcggccttcc gggcatcggc gcccggtttc gcgtcgatgc
     7501 gccgagcgcg ttctttttgg tgatcgtgaa tctgggcgcc gcgacaacaa gcctctatgc
     7561 actcggctac ggccgccacg aagaggcgcc cgcccgtgtg ctcccatttt atgccgcctt
     7621 tctggccggt atgaacctcg tggtgttcgc cgacgatgca ttcaccttcc tgctaggctg
     7681 ggaattcatg tcgcttacct cgtgggcgat cgtacaggcg cgccatcgcg acccggcgaa
     7741 cagccgcgcg gccctcatct atctggtgat ggccagcttc ggcacgctgt gcctgctgct
     7801 cggcttcggg ctcttagcgg gaccggctgg cggctatgcc ttcgagacca tccggcttgc
     7861 ctcccatact ccccttacag cgacacttgc ggtcgtgctt gccctccttg gcgccgggtc
     7921 gaaagcggga ctcgtgccgc tgcacgtctg gcttccgctc gcccatccgg cagcgccaag
     7981 ccatgtttcc gccctgttga gcggcgttat gaccaaggtc ggagtctacg gcttcgtgcg
     8041 catcgtgttc gatctcgccg gcccgcccaa tccgtggctc gggcttgtgg tcctgatgct
     8101 cggcggcatc tccgccgcga ttggtgtcct ctacgcgttg atgcagcacg atctcaagcg
     8161 gctgctggcc tatcacacgg tagaaaatat cggcatcatc ttcatcgggc ttggactggc
     8221 gctggctttt cgcgccaacg gcatgaatgt cgcggcggcg ttggcgctga ccgcggcatt
     8281 gttccacgtg ttcaatcact cggtgttcaa gagcctgttg tttttcggcg ctggcgcggt
     8341 gttggtcgcc accggtgagc gcgacatgga gcggctcggc ggcctcatcc accgcatgcc
     8401 gcagactgcg ttggccttcc tgatcggctg tgcggcgatc tcggcgctgc cgccgctcaa
     8461 tggcttcgtg tctgagtggc tgaccttcca ggcgatcttg gtcagccccg acctgcccca
     8521 gtggggtctc aagttaacgg tgccggccgc cggcgcgttg ctcgcccttt cggccgcgct
     8581 tgcggcggcg tgcttcgtca aggctttcgg cgtcacgttc ctcggccgcc ctcgctcgtc
     8641 ggccgcaata gccgcgggcg aggtcgatgt attctcgctc accgcgatgt tcctgctggc
     8701 ggcgatctgc tttctggccg gtgtgctgcc tggtttcatc atcgatgcac tttcgccagc
     8761 gacggtcatg ctggttggcg acatgatgcc gcgccaagcc gcactgccct ggctgtcgat
     8821 cgtgccgatc ggcgaaagcc gcagctctta caatgggctc gttatcctga ccttcctgat
     8881 cgcgtccggc accctgaccg cgatggtgat ccatcgctgc gccacccggg caacgcggcg
     8941 aagcgcgatc tgggactgcg gcttcccgct cgatgtgccg cagacacaat acgggagcgc
     9001 cagcttttcg atgccgatac gccgcgtgtt cggcacgtcg gtgttcaacg tgcatgagcg
     9061 catcgacatg ccgcagccgg gggaaatccg cgccggcagt ttccgcctgc gtgtcgtcga
     9121 tccggcgtgg cgtcttgtct atgggccgct cgcgcgtatg gtcacaaccg tttcaatgtc
     9181 gcttaatcag ctgcaatttc tgaccatccg ccgctatctc acactggtct tctgtacctt
     9241 gatcgccctg cttgtggtgg tggcggcatg gcgctgatcc tcgacctcct tctgcaggtg
     9301 gtacagatgg tgctggtcgt cgccgtggcg ccggccgttc tcggcgttac ccgcaaggtc
     9361 aaggcgcggc tgctgcgccg catcggcccg cccgtgctgc agccttatcg cgacctgtgg
     9421 aagctgatgc acaaagaggc ggtgctcgcc cccaatgcgt cctggattta ccggaccgcg
     9481 ccctatctga ttttcgccgc cacctgggtg gcggcggcgc tggtgccgtc atatgcgact
     9541 ggtcttttgt tttcatggtc ggctgacctc atcgccatcg tggcccttct cggcaccgcc
     9601 cgcttcacgc tggcgctcgc cggcatggac gtcggcactg cattcggcgg tattggttcc
     9661 tcgcgcgaaa tgatgatcgc gtcactggcc gagcccgcaa tgctactcat cgtattcacg
     9721 gtggcgctgg tggcaggcac tacccagctt tctgcggtcg cgaccatctt ctcgaccgga
     9781 tcagcgggct tacgggtgtc gctggggctc ggcttgttcg ccttcctgtt ggtggcgatc
     9841 gccgagaacg cccgcatccc gatcgacaat ccggcaaccc atcttgaatt gacgatggtt
     9901 cacgaggcaa tggtgctgga atattccggc cgccatctcg ccgtgatcga ggccgcctca
     9961 gcgctcaagc tcgtgctcta tttctcgctc atcatttgcc tgttcatgcc gtttggtatc
    10021 gcgggagcag gcgctgggtt gtctgaatat gcacgcggga tcgtcgccta tctggccaag
    10081 ctgctcgtgc tcgcggcgct gctgccgata gctgagacga gcgtcgcaaa aatgcgagtg
    10141 ttccgttatc cgctgttcgt gggcagcgca tttgcagccg cggcgctcgc ggtattcctg
    10201 ctgttcgtct cgaaaggatt ttgatgtcaa agttgttgtt cgacgtcgcc catctacttg
    10261 ccggcggcat gctggtgttg agctttgccc tgctctacca ggatcgcatt gccgccgtca
    10321 tcaacgtgtt cgccctgcaa gctattgcat tgtcgctttc ggtggcctgg caggcgttgg
    10381 tgcaggatgc cccgcatctc atcgtaacgg cgacgatcgc gcttgtcgtc aagggtttcg
    10441 tggttccgac cgccctgcat cacatcattc gccgcatgca aatccatcgc gaagtcgagg
    10501 aggtgatcgg ctccggcttg accatgctca cggggctggg cttggtggcg ctgtcaattc
    10561 tcttggtgca gccggttggc gaggtcagca tctatgtgcg ggaggatctc gcctttgcac
    10621 tcgctgtcat cctgcttggt ttgctgatga tgatcacccg gcgcaacgcc atcacccagg
    10681 tggtcggttt catgtctctg gagaacggcc tcgtattggc ggcaaccggt gccaagggca
    10741 tgccgctcgt ggtcgagata tcagtcgctt tctccatctt gatcgcgttt attgtgttcg
    10801 gcatcttcgt gttccgcata cgcgaacgtt tcgataccgt cgatgtgagc gcgctcgatc
    10861 ggtttcgcgg cgagcggagg gacgcgtcat gattgagccg gtggagatca ccctcatcat
    10921 cccggcaatc gcgatcccga tcctcgcgct ggtctcgggc tatcggcttg gtgctgcgct
    10981 gaacatcctt gccagtgccc tgacgtttgg cgccgcgggt gcgctgcttt ttaccgagca
    11041 cccacgcagc gatctcatca tcatcgacga tttcaatata tttctgatca ttttgaccac
    11101 tttcgtagga ttcaccacca gcatattcag cgcgacctat ctggcccatg aaatcgagac
    11161 cgggcgcctg acgccgttat ttctgcgttt ttatcacgcc atgtatcaga ccctgatggg
    11221 tgccatgaac gtggcgctgg tcgccaacaa tatcgggctc atgtgggtcg gcgtcgaggt
    11281 cgcaacgctt tcgaccgtga tgatggtcgg catctaccgc acgcccgaag cgatcgaggc
    11341 ggcgtggaaa tatttcattc tcggcagcgt cggcatcggg ctcgcctttt tcggcaccat
    11401 cctggtctat ctggtggcgc aggatgtagt gggcgacggg ctgccggcga tgtcgtggga
    11461 cctgctggcg aaaactgctc cgatgctcga cgcgaagctg ttgtcgcttg ccttcgtgtt
    11521 cctgctggtc gggtacggca ccaaggtagg tctggcgccg tttcatgcct ggttgcccga
    11581 tgcccatgcg gaaggtccga ccccgatctc ggcggtgctg tccggcctct tgctcaacgt
    11641 ggcgctatat gtgctgctcc gtttcaagat ggtgctggcc ggcagtacgg gcgccgtcaa
    11701 cgtcggcgcc atcatggtgg cgctcggtct caccagcctc gtgttcgcgg cctttatgct
    11761 gtaccggagg cgcgacatca aacgcctgtt tgcgtattcg tcaatcgagc acatgggtat
    11821 cgcggccttt gccttcggca tgggcggccc gctcgcgaac ttcgccggcc tgctgcacat
    11881 gaccatgcat tcgctcatca aatctgggat cttctttgcc gtcggtcaca tcacccaggt
    11941 caagggcacc cagcgcatcg ccgcaataag cggcatctcg gtgacccacc cgatgctggc
    12001 cgtactgttt tcctttggcg tcctcgcgat tgccgggctg ccgccattcg gcatgttcac
    12061 cagcgaattc atgctggtat cctcgacctt cgcgcggcaa ccgaccttga gcatcgtgct
    12121 tgttgtcggc ctgctcattg cattcggcgc gctcattctg cgactccagg acatcgtatt
    12181 cggcgaacca accggccaag cccatccggc gcaagcgtca tatattccgg cctatgtgca
    12241 cctgacactg gcgctcatcg ctggcatctg gttacctggt ccagtggtgc agtggttccg
    12301 tagcgtcgcc atgctgcttg ggtgactgcg atggacacga acgcaatctc caccatcctg
    12361 gggcggctcg cggcagttgg ctatcacgcg ccgtggcgac gcttcgatgt tgatacccgg
    12421 acatggacag cgatcgccga gtcgcttggc gagggtgggg cagacctcct tgggctgtgg
    12481 ggtgacgcca atacggtcca cctggcactg cgggtgccgc ctggcgatcc atgcgtgatt
    12541 tcgcttgcca tcgcggaggg aagctttccg tccgtcggcc gtttgcaccc gccggcaatt
    12601 cggctcgaac gggccgtaag cgacctttac ggacatcggc ctgcgcacgc gcccgacggc
    12661 cgcacttggc tcgatcatgg tcaatggggg ctctacgctc cgctgggcgc gggaataccg
    12721 gtgccgcgcc gcgacccggt cgactacgaa tttcaggccg tgcacggcca cggcctgaac
    12781 ctgattccag tcggtccggt gcatgccggg atcatcgagc ccggtcactt ccgctttacg
    12841 gccaatggcg aaacggtggc acggctcgaa gagcggctcg gttacgtgca taagggcatc
    12901 gacggcttgc taaccaatgt cgacctcgcc aaggcagcgc gcatcgtggc acgggcatcg
    12961 ggagactcga ccgttgcact cagcttcgcg ttcgcgcgcg ccaccgaagg tgcgctcggc
    13021 gtcgatgctc cgccgcgcgc ggtcgtgctg cgcggcgtca tggcggagct cgaacgcatc
    13081 gccaatcatt gcggcgatat cggcgcgatc tgcaacgatg cggcgtttgc gttgatccac
    13141 gcccattgcg gcatttttcg tgagcgcgtg ctggcggcct gcgacaaggc gttcggtcac
    13201 cgactgatga tggaccggat cgttccgggt ggcatcgcgc aggacattgc gcccggcggc
    13261 ggcgccgcaa tcattgcgga gcttgatgat atcgcgccgc ggttcgacga gatcgtggcg
    13321 ctctacgatg acaccccgtc gctgcaggat cgcacctgcg gcaccggtca cgtggcgggc
    13381 gacctcgtca accgttgggc tgcgggcggc cacgtgggcc gcgcatcggg ccgcgatttt
    13441 gatgcgcgtc gcgacctcgc gtatccgcct tatcgggggc ttgcctttgc ggtgccgctc
    13501 tacgccgcgg gagatgtcga tgcccgcgtg cgggtgcgca ttgacgaaat ccgcgccagc
    13561 ttgcggatgg tcaaggaatg gttcgccgat ctgcctgacg ggccggttct cacggcgctg
    13621 ccgcaagcgg cagcaccgcg cgaaggcatc gccattactg aagcttttcg tggcgacgtg
    13681 ctggtctggt tgcggcttgg ggcgggtggg caggtagcac gctgccacgt gcgcgatgca
    13741 tcgtggttcc aatggccgtt gctcgaagcc gcgatcgaga acaatatcgt ggctgacttc
    13801 ccgctctgca ataaatcgtt caattgttcc tattcggggc acgatcttta ggccatgcgc
    13861 actttgctat tgaaatcgct gttcgcccgt cctgtgaccg ttaaggcccc tgacgccgcc
    13921 gacagtgggc tcgaagagct tgggcgtacg cttgcggcag gtgggcgcag gttgttcggc
    13981 cgctcgctca ccatccgtga agtcgatgcc ggttcatgca acggctgcga gcttgaaatt
    14041 catgcgctca acaattcgat ctatgacgtc gagcggttcg gcttaagatt tgcggcctcg
    14101 ccgcgtcatg ccgacgtgct gctcgtcacc ggtccggtca cccacaacat gaagaccgcg
    14161 ctcgaacgca cctatgcggc gacaccggcc cccaaatggg tggtggcggt cggagactgc
    14221 ggttgcggct gtggcgtgtt cgagggcagc tatgcggtga tcggtgcggt cgacaaggtg
    14281 atcccggttg atctgcacat tcgcggttgt ccgccgcgac cgatcgatct tctccgcggg
    14341 ttgatcgcac ttgtcgacaa ggccgcgcaa gcgcgggtgc gaggtgcaga agatgctgcc
    14401 cagcccagcg gctgaattca cagcctcgcg gcgaccgtac gcttcgccga tcgtgcattc
    14461 ggacagcatc gtgtaggcgt ccgtccatgc cgcggcgagt tcgcaggccc attgcgctcc
    14521 agctccattg cgctccaggt ccattgcgct ccaagtccat gcttcagcat ccagagcagc
    14581 gcagcgccaa cgggttcgta atgctctgac ttcaccccat aggcgatgtt cttcttggcg
    14641 agcgcgcttg cggccgcaag aactgattcg agattcgtga ggccgttgat gacgaccccg
    14701 tcgccataag cttgtgacct tcttcggtca tgtcgttgcg caataacagc ttcactgccg
    14761 gttcgatctc gaacaaccgg ccataagaca gtgcggcggc ccgctcgggc ctgaccttcg
    14821 caaagctttg ctgaatcacg gcaacttgtt tttgaggagt catttggcca tccttccaat
    14881 ccggtcgcct ctgagcggtc cgcacacgag ccgcgacggc accttcttgc cggctgccgc
    14941 tgcgccgccg aaggtgtggg acttttccaa acgcagcgac agctcggtat ctgcaccgca
    15001 tttcaacatt gaaggggcat gccaacgcat ataaagaacg ttacattttt tgatttcaca
    15061 agaatttcag ccgagagcgc cgcccgcacc agcgcgatgc gcgagcgctg ctataggatt
    15121 tggcacagcg ctgcgcgggc tgggtaaaaa caaagcacgg cgaaaaaagc gcgtgcggtt
    15181 cgcacgcgct atgcgacctt tccggtcggc gcgtccggcg atgatttcgc ccaataatcc
    15241 gccctggcct tggtctcggc gagcttgctc gcgtcctcat agccaggtgc catcgaggcg
    15301 gaggttccgg gcagcacttc gtggtgctcg atattgagga gccgcagcca gctttgctga
    15361 ccgagcgtga gcccgatcat gcagcccaac tcaaccagtt ccggctcggt gaaatggcga
    15421 tggaggcgat cccagaaggc gtcgtcggtc tgcaggtgcc aaacgatcgc ttctgcatag
    15481 gcgagagccg ctttctggcg atcgttgtgt tttgtcgaag tttcgaagtt gaggaggtcc
    15541 agcacgtcgt cctcaatcag ggctccgctt gacgtcgctt ttacggagcg ctgattgccg
    15601 caatattcgc attggaccga tcgcgataca tagaggcggc acaattcctt gaccgcatgg
    15661 tccaccacgc cattgcggaa caggtcgttc caggaattgg caaagaacca gaacgcggct
    15721 ggtacatgcg cccgaacagc tgaactttcc ggccgcgggg tgccttcgtg ctggcagcgt
    15781 tccatttctt tgcgcatctg cgcgtccatt ttttcgagcg gcacgtaact gattcgttgc
    15841 ttggccatat gtggctctct ccgcattttg ccggaaccgg tcgtaggcgt ggcgcccgca
    15901 tcaatatgtt tgttaggcct ctttttaccc tattgtcggc gccgctgcca cctcgctatg
    15961 gttcgcccgt ttggcccttc gcgagactaa tcgacgcgtt gggccacgat ggtttaaggt
    16021 ccgcgcgtcc ctctttcagc cccgcagcaa cggaattgtt ttaatgtccc agcgtttcaa
    16081 gcccttgccc caacatgaca tgaccctaga ccagcagcgc gtcgcacaag cggtggccag
    16141 tgggccgcgt ggcggattgc gtgggccgtt ccacgctctt ctgcgtagcc ccgaactcgc
    16201 ggatcgggtg cggcgcctcg gcgactatgt tcgcttcgaa agcactgtgc cgggcgcact
    16261 gcgtgaactc acgatcctgc tggtcgcgcg gttctggtca gctcactacg aatggaacgc
    16321 ccatcgcaag catgcggttg cggctggatt ggattcatcc gtcgcggacg ccatcgaggt
    16381 gggcaggcgc ccagcgaagc tgtcgaccga tgagacgctc gtctatgatg tcgttaccca
    16441 attgctgcac gataaggaca tcagcgatac gaccttcgtt gccgccagcg cgcggttcgg
    16501 cgaacagatg ttgatcgaat tgatcggcac agcgggctac tacggcttgg tttcgttggt
    16561 gctcaacgcc agccgcacgc cggtcgcgga gggcggcaag ccgttgccgc cgatctaaag
    16621 cgtatctcga tgaagcggcc cgtcacccgc gggcccgcga tagcagtcgg ctgagcgtca
    16681 attgccggtc agagccgcgg caccgccgga tggcgtgcca ggcgggtctg cgccgcgagg
    16741 cggatcgccg cgttggcggc gccgaaaccg cgatagccgc gccgctccac gatctcgaaa
    16801 aagaagcgct cctcgaaagt gcgggtgtaa acctgaagaa attcgtcgct gccatcatga
    16861 tcgtagagga tattgtgtga tttgaattgt tcgatccgtg cgggtgacag atcggtcttg
    16921 gcttcaagat cgtcataata attctcgggg ataggcagca gcgcgacgcc gttcgcttcc
    16981 aggcgcgcga ccgtcgcaag caaatcgtcg gtcgccaacg cgatgtgatg cactccggaa
    17041 ccgaacgcct cggtgaggaa gcgggaagct tgggtgcggg ccgattggga ggcattgagt
    17101 gcaatgcgta gcgcaccgtc cgcggcctgc accaccaggc tcttgaccag cccgcctgga
    17161 tccaggacgt cctgctctgg agtttttttc aaatcgagga gcgatgtgta gaacaacacc
    17221 caggtgagca tttcctcata tttcatggac tgggaaatgt gatcgaccgc cgtgaggctg
    17281 gcgttcgcgc acctctcgcc ggtcggctcg aaatcgacgt cccacatgcg gctaagctcg
    17341 cttttgggat cgatgaaata aacgaggctg ccgccgagac cgcgtaccgc ggggatttcg
    17401 agctcgcccg ggcccacggc ctggcgaaac ggcttgtcga gcaggcgctc tgcgcgggcg
    17461 agcgtggcag ccgcgtcgtt gaccttgagg ccgatcgcgc acacagcggt gccgcgggtg
    17521 atgttgaaag agtgggcgaa accttccttc tcggcattca ccacgatgtt gatggcgccc
    17581 tgcgaccacc gcgtgacagc ctttgacttg tgcgagcccg aatgcacgaa gccgagccca
    17641 cgcagcaatt tctcgaacgt agggacaacg ttctcgtcaa tggcaaactc aatgaattcg
    17701 atacctaggc aacgtgaccg tggcggcaag gcgctaaact ttcccggcgc catgccggag
    17761 cgctcacgca attggtcgaa tagaaacaac agcgaacgtt ggccgtccac cgcaacgctg
    17821 cgggcggacc cggcgcggaa ctggtcgttg aaaatttcaa gcgagagcag cccgtcgaag
    17881 tcggtcgcct gaagaacttc catgaattcg atgagcggca gttcgccctg accggggaaa
    17941 ttgcgaaagt gccggctcca agacagcgaa tccatatcga ggagtggagc gtcagcaacc
    18001 tggaccagaa aaatgcggtc gcgcgggatg gcgccgattg gcttgagatc agtcttgcgg
    18061 gcaaagatgt ggaatgtatc cagcaccagc ccgatggccg gatggtcggc gcgacgtact
    18121 gcctcccagg cgtcgcggta atcgttgatg tggcgccccc aggccagcgc ctcgaagccg
    18181 acccgcatgc cgcggcgcgc ggcacgctcg cccaaggcgc gaagatcggc cgcaacgcga
    18241 tcgatgccgc cgaagctttg cggcgaaacg ttggaacaga cgagaaggag atcgcagccg
    18301 agctcgccca tcagatcgaa cttgcgctca gcacgggcaa agacacgttc gcggctttcc
    18361 ggcggcatgc cttcaaagtc acgaaacggc tggaacgtga caatctgaag tccgaggcca
    18421 gcggcatgct tgcgcacgtc tgctggcgtg ccgtcaaacg ataaaagatc gttctcgaaa
    18481 atctccacgc ccttgaagcc cgccgccgca atggcgtcaa gcttctcggc gaggtcgcca
    18541 ctgagcgaca cggatgcgat cgatagcttc acggccgcac tcccctatct cctacccaca
    18601 attccagtgc ggtccgatcg gcgtcggtgt ccagcaaggt ccgaatccgc cgccgttcca
    18661 gcgtccgcgg taaaaacccg gaccgccgta ccaataggtt ggacggtggg tgcgccccct
    18721 ctcccactcg atcagttcgg gcggctgata gccgggcaag aacccgtagc cgtgccaggg
    18781 acggcttagc gggcgctttc catgggcgct ttcggccgat gcgatcgtcg acgacaatag
    18841 ccacgtcgcg agcgggaaga tcgcagcggc gatgacaaag ccatggcgac ggcaggtggg
    18901 ggccttgccg taagcggatc ggagcacagg cgaatcgatg agtgcaattt ggtttttata
    18961 acgcatcgcg tgctcctttc cggggggcgc ctgcatgcgg tgactctatc catcagcgta
    19021 tctttgccgg cggtcaatcc ggaatttgcg cgatgtccgg tgtcgggatg ggccaggttg
    19081 gttcgtcctt gaagcatgca cacaattctg caagacaaag ccggtcacgg gagagcgatg
    19141 gatggcacgg gtcgtcttca ccccgaatat tcaacgtcat gtggtttgtc cgcaggccga
    19201 ggccgccggc cgcagcgtgc gggaagtttt ggataatgct ttcgcgtccc atccgcaggt
    19261 gcgatcctac gtgcttgatg aacaggcggc cctacgccgg cacatgacga tctttgtcga
    19321 cggccgtgcc attcgggatc gcgtccgatt gtccgatccc gtcaccgcaa gcagcacagt
    19381 ttatgtattt caggctttgt ccgggggcta accatgaacg acacaatcct ggtttcgact
    19441 cgcaaggggc tgttttgggt cgggcgcaag aatggcagtt gggacatcga gcaggtagat
    19501 ttcctgggcg acaatgtcag tctcacgctg acggatccca tcagcggtcg ccactttgtg
    19561 gcgctcgatc acggccactt cggcgtcaaa atgcaccgct cgacggccac tggttgggaa
    19621 gagattgcgg ctccggccta tccgccgaag cccgagggcg tcgaagagaa cgatatgtgg
    19681 ggtcggccgc tggcgtggag cacagcgcgc atctgggcgc tgcaggccgg cggagccgac
    19741 gagccgggcg tgatctggtg tggcacgctg ccgggcggtc tgttccgctc gaccaaccac
    19801 ggcgacagtt gggagttgat ccgtccgctt tgggatcatc ccaagcgcaa acagtggatg
    19861 ggtgggggag ccgacctgcc gggcattcat tcgatcttag tcgatccgca caattcaaag
    19921 cgggtgtgga tcgcagtttc aaccggaggt atatggttca ccgaagactc cggcgcgagt
    19981 tggacgcagc gcggcgaggg catgcgcgcc gagtacgtgc cgccggaatt gacacacgac
    20041 ccaattgcgc aggacgtaca ttgtctggcg caatgcctgg ctgttccgca ccgcatgtgg
    20101 gtgcagcacc ataatgggat ttttgtctcg tcggacgagg gcaggacctt cagcgaaatc
    20161 acgggtgtcg agccctcgac tttcggcttt ccggtcgttg tccatccgcg agacccggat
    20221 accgcgtggt tcattccgga aatcaaggat gagaaacgaa tcccgcgcga cggccgcttg
    20281 gtcgtgaccc gcacgcgcga tggcggcaaa agcttcgata ccctgaccga gggcctgccc
    20341 cagcgacatg cctacgatgt cgtctaccgc cacgcgctgg cactcgacgc gaccggcgat
    20401 cggctggcat tcggctcgac cacgggcgga ttgtgggtaa gcgaggacca gggcgaccaa
    20461 tggtccaatg tcacgtacac gctgccgccg atctatgcgg tacggtttgt gtgagtgagg
    20521 cgcgcgatga ccctgtgagg aacctcgagc gtcgctggcg ccctgttcga cggcgcggcg
    20581 agcggcaaga attaatcatt acttaacaat gacgccgtaa attgaattgg agtttcaata
    20641 caaattgctc atatgtgaga acgcagcttc agacgccgca caagtgcacg ccgcatggat
    20701 ggtggagacg acggtgaagc gatcgcgctg cggagcttgt tcgccggcat ggacgccggg
    20761 gacgaggccg acgcgatttg cgcaatgaac gaaaccgcga tatttttgcg gcaccatgaa
    20821 ctttccttcc ggcaaatcgt gcagcaaatc gaagcacgcg gaatgctatt gccgtcgaag
    20881 gtggcgacgg caatccaatt gatggactcg acgactttgg cggaagcgga aagcgcgctc
    20941 gccggtgccc gccgcctcat gagaagttgc ggacttacgt tcgcgtgcat cctcggcgcg
    21001 ttccagcgcg agccaactgg ggctgacgaa ttcgaacagc taaagtgcgc ctttcaaatc
    21061 gaggtggagc gatcgcgcga gctagcggcc gagcttcaat tcctgcgcgc aagagctgac
    21121 aacttgggat ttcctttggt cagctcgccg ttcaggaact ttgtgctggt agcaacattg
    21181 ttgttcgggg tgttactggc cgcgtcgatt gtgtcgacga tcatggatct attccggtcg
    21241 gcgaatgcga ctgcgcccac aatggtgcgg cgagctgatg ccaatccctt gcccgtgccg
    21301 cgccccattt cgaattgttg gcgcgaccgc agcattcaag gtccgtgctt ctgaacgggc
    21361 ttgcgacctg ccagctggcc gaccggtaac cgcggaacgc tggcagttgc cacgagatga
    21421 tcaatcacga tgggcttaag gttgtggcca aggccaccca tggcgattat gtttagggtg
    21481 acagggatcg gacaatggat caaggtatgg cagctggagg cttctcgcgg tcaagtatcc
    21541 gaatatcccg caggtgcgcc acgataacga agccggaaaa ggggatatcg agatgcttac
    21601 aatagtcgcg atcatcttgg cagatttgat cgtggtctcg ctcttcatct atcggtatcg
    21661 gcaagagctt ggtctcacgg ttaatggctc ccacgacaag ccggttgtgc gcaagaggtt
    21721 tgtcggtcat aaacccgtgc gcgaggacgt ggcggacgat aaggtacagc atgcgcaagt
    21781 cgtgacacga gcgggcacga cagcgaacag aacctcgcgc acggcacggc ggcaagcgca
    21841 gatcggggcg ccgcgtcaga caacatgaac tcttttgtgc ggatgcggcc tcattcaccg
    21901 accatcttag cccacaggaa aatgaccgat aacctaagtt ctcgtgccct
//
LOCUS       DATILV010000379         2946 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4943807, whole genome shotgun sequence.
ACCESSION   DATILV010000379 DATILV010000000
VERSION     DATILV010000379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2946)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2946)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2946
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4943807"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(215..466)
                     /locus_tag="VLJ17_08665"
     CDS             complement(215..466)
                     /locus_tag="VLJ17_08665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23086.1"
                     /translation="MLGDKAYDSNAVRQEIEDCGGEALIPSTASRKIQRSVDKAIYAQ
                     RNRIELQPLEKLMTGRDPLRQTHRELRSLCHPCSHSNLD"
     gene            complement(453..653)
                     /locus_tag="VLJ17_08670"
     CDS             complement(453..653)
                     /locus_tag="VLJ17_08670"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSV23087.1"
                     /translation="MTGPGEAERNALGRSRGGFSTKINARTNAEGLPIGLVITPGQVH
                     DVTAFPALMQELDCDPEQVARR"
     gene            complement(663..1544)
                     /locus_tag="VLJ17_08675"
     CDS             complement(663..1544)
                     /locus_tag="VLJ17_08675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein FlbB"
                     /protein_id="HSV23088.1"
                     /translation="MRELRLIPVVLLAIASLAALKLQGLFFDGGYLLTDLDAAATERP
                     IHVENDTAAGTAKVVDSKISMLQSDPSGGRQTLGGPDITGSAAADTQASHNLERGTDR
                     NAQRDSTGNSPQAPPKPAAATPEKPPDGKVIQLDSLPGPSPSERAILERLQERRQELD
                     ARGREIELRENLLKAAEKKYESRSNEMRDREANTSAALQKKEEAEAARLKNIVTMYEN
                     MKAKDAARIFDRLEMRILVEVASQINPRRMSDILGQMSSEAAERLTVELANRATASAE
                     RSLDAGRLPKIEGVPKN"
     gene            complement(1553..2014)
                     /locus_tag="VLJ17_08680"
     CDS             complement(1553..2014)
                     /locus_tag="VLJ17_08680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007602137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6468 domain-containing protein"
                     /protein_id="HSV23089.1"
                     /translation="MNHQLGLFIEATVAVLLMITIGYCYVLDRRLKRFRADEIQLKKT
                     IGELITATEIAERAIAGLKLTVRDCDQNLGERLRTAERFSVDIGQQLAAGDAVLQRIS
                     QIAAAGRPAQPAQSVPPAPTPPVATSNTQSTLAAAQALVERARSRSGNIAA"
     gene            complement(2011..>2946)
                     /gene="fliM"
                     /locus_tag="VLJ17_08685"
     CDS             complement(2011..>2946)
                     /gene="fliM"
                     /locus_tag="VLJ17_08685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliM"
                     /protein_id="HSV23090.1"
                     /translation="VRAIIDSGVVSYERLPMLEIIFDRLVRLTTSSLRQFTSDNVEIS
                     LDRITSVRFGDYLNSIPLPAILVVFKAEQWDNYGLITVDSNLIYSMIDVLLGGRRTTS
                     SIRIEGRPYTSIESSMIRRMVEVILKDAEQAFAPVSSVRFSVDRLETNPRFAVISRHA
                     NAAILVKLRIDIEDRGGSVELLLPYATIEPIRDVLLQMFMGEKFGRDPIWEGHLATEI
                     GQAEIAVDAVLYEAKLPLRRVMALEVGDTLSLDLDSDALVTVRCGDVALTEGRMGRVG
                     DRVAVRVVKPLRKPSTTFAMFETAGERSGRITEPT"
BASE COUNT          528 a          868 c          922 g          628 t
ORIGIN      
        1 cgttcccttc caaaccgctg cgcattgtag cgcccttccc gccgtcaggc tcgatcgagc
       61 tgcgtgaaga aaacctgccg gaagctgagc gaattttctg tcttgctttt ggcacgttcc
      121 tcggcgcttc gccgcgtctc cccggcgccc ggcggaggaa attccccgtt tcgggcgtgg
      181 ggtgggtgcc tttgtctagg tcgcgtggac aaacctaatc cagattcgaa tggctgcaag
      241 gatgacaaag gctgcgaagc tctcgatgag tttgtcgtag cgggtcgcga cccgtcatga
      301 gtttttcaag cggttgaagc tcgatgcggt tacgctgcgc gtaaatggcc ttgtcgacgg
      361 agcgctgtat tttccggctc gctgtgctcg gaatgagggc ttcgccgccg cagtcctcaa
      421 tttcttgacg cacggcattg ctgtcgtagg ctttatcgcc gagcaacctg ctcaggatcg
      481 caatccaact cctgcatcag tgccgggaat gcggtaacat cgtggacttg tcccggagtg
      541 atgacgagcc cgatcggcag gccttcggcg ttggtgcgtg cgttgatctt ggtcgagaag
      601 ccgccgcgcg aacggccgag cgcgttgcgc tcggcttccc ctggtccggt caacggttcg
      661 tgtcagttct ttggtacgcc ttcgattttc gggagacggc cggcatcgag actgcgttca
      721 gccgatgcgg tcgcgcggtt ggcaagttcg acggtgaggc gctcggctgc ctccgaggac
      781 atctggccaa gaatatccga catccgtcgt ggattgatct gggaggcgac ctcgaccaga
      841 atccgcattt ccaagcgatc gaaaatccgc gcggcgtcct tcgccttcat gttctcgtac
      901 atggtgacga tattcttgag gcgcgcggcc tcggcttctt ccttcttttg caatgcggcg
      961 gaggtattgg cttcccggtc gcgcatctca ttggaacgag actcgtactt cttttcggcg
     1021 gccttgagca ggttttcgcg caactcaatc tcgcggccac gggcatccag ctcctgacgc
     1081 cgttcctgca accgctcaag aatagcgcgt tccgagggcg aaggtcccgg aagggaatcg
     1141 agttggatca ctttgccgtc cggtggcttc tcgggtgtcg cggcggcggg cttcggggga
     1201 gcctggggcg aattgccggt gctgtcgcgt tgtgcgttgc ggtctgtacc gcgctccaga
     1261 ttgtgcgacg cctgggtgtc ggccgcggcc gagccggtga tgtctgggcc ccccaacgtc
     1321 tgccgccccc cggatggatc ggactgcagc atcgatattt tgctgtcgac gacttttgcg
     1381 gtgccggccg cggtgtcgtt ttctacatgg atcggccgtt ccgtggcggc ggcgtcaaga
     1441 tcggtcagaa gatatccgcc gtcgaaaaac aaaccctgca atttcagtgc cgcaaggctg
     1501 gcgatcgcaa gcaggacgac cggaatcagt cgcaattcac gcacacgcgt tatcatgccg
     1561 caatattacc ggatctgctg cgtgcgcgtt cgaccaacgc ttgggcggcc gcaagggtgg
     1621 attgcgtgtt gctggtcgca acgggcggtg tcggcgccgg cggcaccgat tgggcgggct
     1681 gggctggacg gcccgccgcc gcgatctgcg agatgcgctg caggacagca tcgccagcgg
     1741 cgagctgctg tccgatatca accgaaaacc gttcggcagt acgcagccgc tccccgagat
     1801 tctggtcgca gtcccgcacc gtgagcttga gcccagcaat cgcgcgctct gcgatttcag
     1861 tcgcggtgat caattcccca atggtcttct tgagctgtat ttcgtcggcg cggaaccgtt
     1921 tgagccgccg atcgaggacg tagcaataac cgatcgtgat catgaggagg accgcgacag
     1981 tcgcttcgat gaacaggccg agctgatggt tcacgttggc tccgttattc tgccagagcg
     2041 ttcgcccgcg gtttcaaaca tcgcgaaggt ggtgcttggc ttgcgcagtg gcttgacaac
     2101 gcggacagcg acgcgatcgc caacccgacc catccgacct tcggtcagcg caacgtcgcc
     2161 gcatcgcaca gttaccaatg catcggaatc aaggtcgagc gacagcgtgt cgcctacctc
     2221 cagcgccatc acgcgcctga gcggcaattt ggcctcgtag agtacggcgt cgacggcgat
     2281 ttcggcttgg cctatctcgg tggcgagatg gccctcccag atcgggtcgc ggccgaattt
     2341 ctcgcccatg aacatttgca acagtacgtc gcggatcggc tcgatggtcg cgtatggcag
     2401 cagcagttcg accgagccgc cgcggtcctc gatgtcgata cgcagcttga cgaggatcgc
     2461 cgcattggcg tggcgcgaga tcaccgcaaa tcgcgggttg gtctccagcc ggtctaccga
     2521 gaagcgaact gaagaaaccg gtgcgaaggc ctgctcggcg tccttgagga tgacctccac
     2581 catgcggcga atcatgctgg attcgatcga cgtgtaggga cgcccctcga tgcgtatgct
     2641 tgacgtcgtg cggcgcccgc cgagcagcac atcgatcatc gaatagatca agtttgaatc
     2701 gacggtaatc agcccataat tgtcccattg ctccgccttg aacacgacaa ggatcgccgg
     2761 cagcggtatg gaattgagat agtcgccgaa ccgcaccgag gtgatgcggt cgagtgaaat
     2821 ttcgacattg tcggaggtga actggcgcaa cgacgatgtg gtcagacgta ccagacgatc
     2881 gaatatgatc tcgagcatcg gcagacgctc gtaggaaacc acacccgaat cgatgatggc
     2941 acggac
//
LOCUS       DATILV010000380         7554 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2646875, whole genome shotgun sequence.
ACCESSION   DATILV010000380 DATILV010000000
VERSION     DATILV010000380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7554)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7554)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7554
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2646875"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..657)
                     /locus_tag="VLJ17_08690"
     CDS             complement(<1..657)
                     /locus_tag="VLJ17_08690"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HSV23091.1"
                     /translation="MTEVENAPRDVSRRDLFKTVGAGAAAAVAGTPLGQSPAVAQSRQ
                     ASAPQLEALETLTAAEADTLEAICARLIPSDENGPGAAEARAAHYIDRALTGPLRSSR
                     DAYAAGLAAIDVYAQTSKGAAFAKLGPRDQDAVLTDMENNVAAGFMPNAATFFNLVRT
                     HTIQGTFSDPYYGGNANFIGWDLIGYPGLRMTVGPDEQRMDVPKPVRKSAYDEAMFTL
                     K"
     gene            complement(842..2173)
                     /locus_tag="VLJ17_08695"
     CDS             complement(842..2173)
                     /locus_tag="VLJ17_08695"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSV23092.1"
                     /translation="MQKVTSRSDLHRIIVVGGGAGGLELVTRLGDRLGRRRLADISLI
                     EKARTHLWKPLLHEVAAGSMDVSRHELDYLAQAYWHGFRYRFGEMVGLDRAKRLVRLA
                     ANFDDEGRLITPERSFGYDTLVIAIGSVTYDFGTPGVKEYAIALDTPEQAQLFNRRLI
                     NACLRAHSQADPVRPGQLHVAIIGAGATGTELSAELHRTVRGVVAYGLDRIDPDKDLK
                     ITLIEAADRIVPALPPRLSSATARLLGELGVEIRTGARVREVRPDGVVLAGGEFIPSE
                     LVVWSAGVRGPEVLKDLDGLEARPSNQLVVLPTLQTTRDDNVFAMGDCAWLVPEGEER
                     PLPPRAQAAHQQASHLVKQIARRLDGRPMEPFVYRDFGSLVSLGEFSTVGNLMGFLAG
                     KGMMIEGFVARVMYRSLYKLHEMALHGPLKVGLDTLARALTRRTEPHVKLH"
     gene            2365..2568
                     /locus_tag="VLJ17_08700"
     CDS             2365..2568
                     /locus_tag="VLJ17_08700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23093.1"
                     /translation="MERIVGISAAADVLGVSISTLRRWERLAASSAVSACGEERSGAA
                     RKSRLKRASKKQEPNGIGELCAA"
     gene            2646..2840
                     /locus_tag="VLJ17_08705"
     CDS             2646..2840
                     /locus_tag="VLJ17_08705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23094.1"
                     /translation="MRSNIGAYLAVILSALAVAALLTSPAAAKSSNSYRNYHRTYGPY
                     TPSLPVSRYGGSRDFQNEPR"
     gene            complement(2861..3217)
                     /locus_tag="VLJ17_08710"
     CDS             complement(2861..3217)
                     /locus_tag="VLJ17_08710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014492592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV23095.1"
                     /translation="MSVLKALTRLLRTRSLHAKTYSSAREFLGALPVGLPECLILDLQ
                     MPEMSGLELLHDLTHRRIQIPIIIISAHGDISMRERCKSAGAIAFLLKPVQDTSLFAA
                     IDDASRIAKDRSHPSS"
     gene            complement(3334..3939)
                     /locus_tag="VLJ17_08715"
     CDS             complement(3334..3939)
                     /locus_tag="VLJ17_08715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014493295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV23096.1"
                     /translation="MFTVFIVDDDPGVLKGLSRLLRATGHDILVYTSPQEFLTRHNAA
                     VPGCAVLDVSLPGLDGLELQQALMAGGSHRPVIFLTGNGDIPTSVRAMRAGAIDFLTK
                     PVSEKDLLGAIARAEEQDTKSRQVQAELASIQARIATLTAREHQVFEHVVAGRLNKQI
                     AGDLGTVEKTIKVHRGRMMEKLGVRTVADLVRLAGKAGVSK"
     gene            complement(3960..6239)
                     /locus_tag="VLJ17_08720"
     CDS             complement(3960..6239)
                     /locus_tag="VLJ17_08720"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV23097.1"
                     /translation="MAAYHLVLSTDLRSVFAAGIFVFAILFSITSLAGAGAEQRRRIY
                     FLESLSPTQPAATRTIEGFKKRLSEKTTESFEIYIDYMELGRFSGQAHLDRTARFLTG
                     KYAEGPPDVLITLGRAAVPFMLKYRDVIAPQVPIIIASVPARAAAEAKALVDAVYVVT
                     EYNFAKTLELAQQLQPDARNLVLVGGASEYDRSWVNDARHELEPFSNRFKIQYVIGLP
                     YDDMLREVSQLSRHTIVMMSFVFVDGAGQSRVPPDVAAAVANISAAPVYSPVSTFFGR
                     GVIGGYMDSYEAQGIAAADLAVEILSGKAPAALHRETKPSHRYQVDARQLERWGLSSR
                     NLPPQTAVSWQEPSLWEQHRNLVLAGILVFAVQTGLVGALLIHQRQRQRAEALLKESE
                     ERMTFTAASANVGMWQFNRETKDLWTTEHCRTMFGLANDDPLTGSMLLEAIHPEDREI
                     AASSLRETLNPDKPAGADVRVVLPNDGVRWVRILARSNPDVGGALKQLSGIFVDISEQ
                     KAAETDAALQRNEVAHLMRASVLGQLSGAIAHEINQPLTAILSNAQGALHLLAQNSPD
                     LAEVRDALQDIVDEDNRAGEVVHRLRNLLRKGERKIESVDVNDLVNSTIALLNSEFIS
                     RRISVKVDLANWLPATSGDPVQLQQVLLNLVINAMDAMASTPVAQRLVTISTRATRAG
                     AVEVGVTDCGCGIRPVEQGRLFEPFYTTKSHGLGLGLTICSTIIHAHGGKLALTNDEV
                     GGALAVFSLPAREMLFAAQ"
     gene            6580..7554
                     /locus_tag="VLJ17_08725"
                     /pseudo
     CDS             6580..7554
                     /locus_tag="VLJ17_08725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018241012.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
BASE COUNT         1570 a         2308 c         2215 g         1461 t
ORIGIN      
        1 cttcagtgtg aacatcgcct cgtcataagc cgatttgcgt accggtttag gcacatccat
       61 gcgctgctcg tcggggccga ccgtcatgcg cagacccgga tagccgatca aatcccagcc
      121 gatgaagttg gcgttgccgc cataataggg atcgctgaac gtgccctgga tggtgtgggt
      181 gcgcaccaga ttgaagaacg tcgcggcgtt gggcatgaag ccggcggcga cgttgttttc
      241 catgtcggtc agcaccgcat cttggtcacg cggccccagc ttcgcgaaag ccgcgccctt
      301 cgatgtctgt gcataaacgt cgatggccgc gagacccgcc gcataagcgt cgcgggaaga
      361 acgcagtggt cccgtgaggg cgcgatcgat gtaatgggcc gcacgggcct ccgcggcgcc
      421 ggggccgttc tcgtcgctcg gaattagacg ggcgcagatc gcctccaggg tatcggcctc
      481 ggcggcggtc agcgtttcga gcgcttcgag ctgtggtgcg ctcgcctgac gagactgcgc
      541 cactgcgggg ctttgcccca acggtgttcc cgcaactgcg gcggctgcgc cagcgccgac
      601 tgtcttgaaa agatcgcgcc gcgacacatc gcgcggcgcg ttttcgactt cggtcatggt
      661 ctcctccccg gttgatgcgg attggcgtca ggctgctccc ttgcgaaggc gtccgcaaga
      721 caggaaggcc cggccgccct ctctcccggt cttcgggagg gtaggtgttt tccacggcaa
      781 ggctttgccc gtatcacccc tcaaaaacaa aatcctaatc ctttatgtct cctcagagcc
      841 gtcaatgcag cttgacatga ggctcggttc gccgcgtcag cgcgcgggcg agggtgtcga
      901 gcccgacctt cagcgggccg tgcaaggcca tttcgtgcaa tttatagagc gagcgataca
      961 tcacgcgcgc gacaaaaccc tcgatcatca tgccctttcc ggcgaggaaa cccatcaggt
     1021 tgccgacggt cgagaattcg ccgagcgaaa ccagcgagcc gaaatcacga tagacaaacg
     1081 gctccatggg gcggccgtca aggcggcgcg cgatctgctt tacgaggtgg gatgcttgct
     1141 gatgtgccgc ctgggcacgt ggaggcagcg gtcgttcctc gccttccggc accagccaag
     1201 cacaatcccc catagcgaac acattgtcgt cgcgcgtcgt ttgcaatgtc gggagaacaa
     1261 cgagctgatt cgacggcctc gcctccaacc catcgagatc ttttagcacc tcggggccgc
     1321 gcacgcccgc tgaccagacc acaagctccg aaggaatgaa ctcgccgccg gcaagaacga
     1381 ccccatcggg ccgcacctcc ctcacgcggg cgcccgtccg aatctcgaca ccgagctcgc
     1441 caagcaggcg cgccgttgcg ctggacagtc gcggcggcaa tgccggcacg atccgatccg
     1501 cggcctcgat caacgtaatc ttgagatcct tgtcgggatc aatcctgtcg agcccatagg
     1561 caacgacacc gcgcacggtg cggtgcagtt cggcagataa ttcggtgccg gttgctccag
     1621 cgccgatgat agcgacgtga agctgtccag gccgcaccgg gtcggcctgg ctgtgggcgc
     1681 gcaggcaggc attgatgaga cgccggttga acaattgtgc ctgctccggc gtatcgagcg
     1741 caatggcata ttccttcacg ccgggcgtgc cgaaatcgta ggtgacgctg ccgatcgcga
     1801 tcacgagtgt atcgtagcca aatgaacgct caggtgtgat aaggcgaccc tcgtcatcga
     1861 aattggcggc gagacggacg agccgcttcg cgcgatcgag accgaccatc tcgccgaaac
     1921 ggtaacgaaa gccgtgccaa taggcctgag ccagatagtc aagctcgtgg cgggaaacat
     1981 ccatgctgcc ggccgccact tcatgaagga gcggcttcca tagatgcgtc cgcgcctttt
     2041 cgatgagcga gatatccgca agccggcgac ggcccaaccg gtcgccaagc cgcgtgacga
     2101 gttcgaggcc gccagcgccg ccaccaacga cgataatacg atgaaggtca ctgcgcgaag
     2161 taaccttctg catctgatcg cccaccaccg cgtccttgct ggaggttccc gatcgacctt
     2221 cgccgcatat aacaccgccg ataggccgga caagctcggt tggctgcatt ctccctcgtt
     2281 atccgcggtt gcggctgcat gctttggaga gggctaaaat agcaattctt caatcttctg
     2341 cgaatctgtg caattctgtg caatatggag aggattgttg gcatcagcgc ggcagcggac
     2401 gtgctgggcg tgtcgatttc gacgctgcgc cgctgggaac gtctggccgc aagctctgcg
     2461 gtgtcagcct gtggagagga acgctctggc gcggctcgca agagccgctt aaaacgggcc
     2521 tcgaagaagc aggaaccgaa cggcattggc gagctttgcg cagcttagct cgactttgcg
     2581 gaggtttcgg agagcggcga agcgagctct agccgacgaa ccgcttatgg atggaggagc
     2641 acaatatgag gtcgaacatc ggagcgtact tggccgtgat cctgtcggca ctggccgtcg
     2701 cggcgttgct gacgtctccg gctgcagcga agtcgtcgaa ctcctatcgg aattaccatc
     2761 gaacctacgg accctacacg ccgtctctcc cggtttcgcg atacggcggt agtcgcgatt
     2821 tccaaaacga acccaggtag ccaaaccgtc accgcgtcgc tcacgatgac ggatgactgc
     2881 ggtctttcgc gattctgctg gcgtcatcta tagcagcgaa cagcgacgta tcctgcacgg
     2941 gtttcaagag aaacgcgata gcaccggctg atttgcagcg ttcgcgcatg ctgatgtcgc
     3001 cgtgtgcact aatgatgatg atcggaattt ggatccgtct gtgcgtcaag tcgtgaagga
     3061 gctccaggcc actcatctcc ggcatttgta agtcgaggat caggcactcg ggcagcccga
     3121 cgggcagcgc cccaagaaat tctcgcgccg agctgtatgt ctttgcatgc aaagaacgcg
     3181 tgcgcagcaa ccgtgtcagc gccttcagca cggacacgtc gtcatccaca atggcgatcc
     3241 agggggaagc ttctcccata gagacattgt tgcaatggcc gagggggatc gtcgattgcc
     3301 ccttggtcca acatcgccgt ggcaactacg ggcttacttt gaaacgccgg cctttcccgc
     3361 caagcgcaca agatccgcga cggtgcgcac ccccagcttt tccatcattc ggccgcggtg
     3421 aaccttgatg gtcttttcga ccgtcccaag atcgccagca atctgcttgt tgagccgccc
     3481 ggcgacaaca tgctcgaaca cttggtgctc gcgcgcggtc aaggtcgcaa tcctcgcctg
     3541 gatcgaagct aactcggcct gaacttgccg agacttggtg tcctgctctt cggcccgcgc
     3601 gatggctccc aacaggtcct tctcgcttac cggcttggtc aggaaatcga tggcgcccgc
     3661 cctcatggcg cgcacgcttg ttggaatatc gccgttcccg gtcaggaaaa tgactggtcg
     3721 atgtgatccg ccggccatca gcgcctgctg cagctcaagg ccgtcgagac ccggcaggga
     3781 gacgtccaat acggcgcaac ccggaactgc agcgttgtgg cgcgtgagaa attcctgcgg
     3841 cgacgtgtat accagaatat cgtgccccgt cgcgcgcaat aggcgcgaca atcccttaag
     3901 cacccccgga tcgtcgtcga caatgaagac tgtgaacatc ctgctcgcca cttgattcgt
     3961 cactgggccg cgaagagcat ttcccgagct gggagcgaaa aaactgccag ggcgccgccg
     4021 acttcgtcat ttgtgagcgc aagcttgccg ccgtgcgcat ggatgatggt cgaacaaatc
     4081 gtcaagccga gaccgaggcc gtggctcttg gtggtataga acggctcgaa cagccggcct
     4141 tgctccacag gtcggatgcc gcatccgcaa tccgtcacgc ccacctcgac ggccccggct
     4201 cgcgttgccc gcgtggagat cgtgacgagc cgctgcgcca cgggcgtcga ggccatcgca
     4261 tccatcgcgt tgatcacgag gttgaggaga acctgctgca actggaccgg atcgcccgac
     4321 gttgccggta gccaatttgc cagatcgact ttgacgctga ttcggcgact gataaactca
     4381 ctgttgagca gtgcaattgt tgaattgacc aggtcattga cgtcgaccga ctcaattttc
     4441 ctctcacctt ttctcagcag gttccgcagc cggtgaacga cctcaccggc gcgattgtcc
     4501 tcgtcaacaa tatcttggag agcatcccga acttcggcga ggtccggtga attctgcgcc
     4561 agcaggtgca gcgctccttg cgcattcgac aggattgcgg tgagcggctg gttgatctca
     4621 tgcgcaatcg cgccggagag ttgacccagc acggaagcgc gcatcaggtg cgcaacttca
     4681 ttgcgttgca atgcggcatc ggtttctgcg gccttctgtt ctgatatatc gacaaaaatc
     4741 ccgctcaatt gtttcagagc cccaccaaca tcgggattcg aacgggccaa aatgcgcacc
     4801 caacgaaccc cgtcattcgg caggacgacg cgcacgtcag cgccggcggg tttgtcggga
     4861 ttcaaagtct ctcgaagcga agacgcggca atttcacgat cttccgggtg gattgcctcc
     4921 agaagcatgc tgcccgtaag cggatcatcg tttgccaaac cgaacatcgt gcggcagtgt
     4981 tcggtggtcc ataagtcctt ggtttctcga ttgaattgcc acattccgac attcgctgaa
     5041 gcggccgtga atgtcatgcg ctcttcgctc tccttgagca gagcttcggc gcgctggcgc
     5101 tggcgctggt ggatcagcaa ggctccgacg aggcccgttt gcacggcgaa aacgaggatg
     5161 ccggcgagca cgagattgcg atgctgctcc caaagcgagg gctcttgcca agagacggcc
     5221 gtttgcggag gaagattgcg agacgacaag ccccatcgct caagctgtct tgcatcgacc
     5281 tgatatctgt gagagggctt tgtttcccga tggagcgcag cgggagcttt gccagataga
     5341 atctccacag cgaggtctgc ggccgcaatg ccctgcgcct cgtagctatc catatagccg
     5401 ccgatgactc cccgaccaaa aaaagtgctg accggggaat agaccggagc ggccgaaata
     5461 ttggcgaccg ccgccgcaac gtcgggcgga acgcgcgact ggccggcacc atccacgaag
     5521 acgaatgaca tcatgacaat tgtatgacgc gacagctgcg agacttccct caacatatca
     5581 tcgtagggaa ggccgatgac gtattgtatc ttgaatcgat tcgagaacgg ctctaactcg
     5641 tgacgagcat cattcaccca agaccggtcg tattcggatg ctccgccaac caagacgaga
     5701 ttgcgcgcat caggttgaag ttgctgggcg agttccagcg tcttggcgaa attgtattcg
     5761 gtaaccacgt aaacagcatc gacaagagcc ttcgcttcag ccgccgctcg ggccggtacg
     5821 ctagcgatga tgatcggcac ctggggcgcg atcacatcgc gatacttgag catgaacgga
     5881 acggccgcgc gaccgagcgt tatcagcacg tcgggcggcc cttccgcata ctttccggtc
     5941 agaaatcgcg cggtgcggtc gaggtgcgcc tgacccgaaa accgccccaa ctccatatag
     6001 tcaatatata tctcgaagct ttcggtcgtc ttttcgctca accgcttttt aaacccttcg
     6061 atggtgcgcg tcgcggcggg ttgcgtggga ctgagacttt caagaaaata gatgcgccgc
     6121 cgctgctcag cgcccgcccc agccaacgaa gtaatagaaa acaagatcgc gaaaacaaaa
     6181 atccccgctg cgaaaacgct gcgcagatcg gtcgatagaa caaggtgata cgctgccata
     6241 tttggccttg ccaacactcc ccctgccgac gagaccttgg tcaatacttt agcatcagag
     6301 acaattcaga caatagtgtt ttcaaaccat gacaagccgg tgacggccgc gccccgaccg
     6361 atgttggacc acggtccaat agagaaccag aatttttctc gatagccttc cccccctttt
     6421 tctgagaccg gagagcgcgc agacccgcaa ccaaaaaaga tagacgtcaa caacatcgcg
     6481 tgcatctgcg cgcacggctt catattgccg cgctgggcgc gaccctcatc gggcgccggc
     6541 tgccggccca tttagggtag ccacctaggg agaaagacca tgaatgcggt caggcgagcc
     6601 tggctcggtc tattggcatc gttagccgtc ctaacggtgg tgaacgcgcc ggcggtcgcc
     6661 cagcaacagc agcggcccaa cattgtcgtc atcatgggcg acgatattgg catctggaat
     6721 atcggcgccg accatcgtgg catgatggct gggcgaacgc cgaatctgga caagctcgct
     6781 gccgaaggca tgctgttcac cgactactat gctgaagcga gttgcacggc gggccgcgcc
     6841 gccttcatca ccggcgagct gcccattcgc accggaatga cgactgtcgg ccaggccggt
     6901 gcaccgaccg gcctgccggc ggaggccgtg acgattgcca ccgcacttaa ggccatgggc
     6961 tacgccacag gccagttcgg caagaaccac cttggcgatg agaatgagtt tctgccgacc
     7021 gtacacggct tcgacgagtt cttcggctat ttgtatcacc tcgacgcgat ggaagacccg
     7081 gcgcaccccg gctacccgca ggagctgctg aacgtcgtcg ggccgagcaa catggtccat
     7141 tcctttgcga cggaccgcga tgaccccact gtcgagccgc gctggggcaa agtcggcaag
     7201 cagaggatcg aagatgccgg cacgctttat cccaagcgga tggagaccgt atccaaagcg
     7261 gatggagacc gtggacgacg acattcgcga cttggctttt gaagttcatc gagaaggcca
     7321 aggctgacaa caaaccgttt ttcctttggc tcaatcccac gcgcatgcac atcgtgacgc
     7381 atctgtcccc caagtacgag gcgttgcgca actccaagaa cggctggacc attcatgaag
     7441 ccggcatggc acagctcgac gacgacgtcg gccttgtgat gcagaagctc aaggacatgg
     7501 gcgtcgacga caacaccatc gtcatgttca ccaccgacaa tggcaccgaa gtct
//
LOCUS       DATILV010000381         7368 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3411763, whole genome shotgun sequence.
ACCESSION   DATILV010000381 DATILV010000000
VERSION     DATILV010000381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7368)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7368)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7368
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3411763"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..788)
                     /locus_tag="VLJ17_08730"
     CDS             complement(<1..788)
                     /locus_tag="VLJ17_08730"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSV23098.1"
                     /translation="MERQIGAALAIVAALGAASAVAQPAANTVDAHLAAAKAAAGSDF
                     TGTLARICIAPQTAPGADVRPPPPPDRATWFTEPAKVFDNVYFVGTKIHSSWALTTSE
                     GIILIDTLYDYASEEAIIGGLRKLGLDPGAVKYVIITHAHGDHVGGAKLMQDRLGARI
                     IMGGPDWDSIEKSVNQYPNGKPKRDIVATDGQKVTLGDAWVTLALTPGHTPGTVSMFF
                     QVNDGGRPLTVAYSGGTAFNFVNDVPHFDTYITSQRKMAELAGI"
     gene            1205..1357
                     /locus_tag="VLJ17_08735"
     CDS             1205..1357
                     /locus_tag="VLJ17_08735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23099.1"
                     /translation="MRSRRQGIKMALGLTCVTIGVLVLTGFDKAIETAVVEASPSWLT
                     DLTTRF"
     gene            1406..1933
                     /locus_tag="VLJ17_08740"
     CDS             1406..1933
                     /locus_tag="VLJ17_08740"
                     /inference="COORDINATES: protein motif:HMM:NF028004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P460 family protein"
                     /protein_id="HSV23100.1"
                     /translation="MNTGSRLIIATITVTIAGAVQSRAGGDRVVFPENYAKGVRYLTL
                     DKPDGRDIHDFYANPAAAEAARKGAPLPDGTVITVVHYAAQLDAEGKPTKDVDGRLTR
                     TDEILGYAVMEKRAGWGAAYVEQVRNGDWEYQAFRPNKTVNPNANLTSCFTCHRSQAG
                     HDFVFTHDNLKAAAP"
     gene            1968..2501
                     /locus_tag="VLJ17_08745"
     CDS             1968..2501
                     /locus_tag="VLJ17_08745"
                     /inference="COORDINATES: protein motif:HMM:NF028004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P460 family protein"
                     /protein_id="HSV23101.1"
                     /translation="MNICSKLTIATVAVTITGLAVVKVRAGGDRVSFPENYAKGVVYL
                     TLDKPDNKQVREYFTSSAAADAAKKGVPLPDGTVITAVQYAAQLDAQGNLAKDANGRL
                     IKTNNIVGYAVMEKRGGWGATYPENVRNGDWEYQAFRADQTANPNANLSACFNCHKPQ
                     ADQDFVFTHDSLKVAAR"
     gene            3031..4218
                     /locus_tag="VLJ17_08750"
     CDS             3031..4218
                     /locus_tag="VLJ17_08750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HSV23102.1"
                     /translation="MVVRAGREFLAIPGPTTVPDEVLRAMHRPAIDIYAGPLLALTDS
                     LLADMSQLFRTKGRSYIYIANGHGAWEAALTNVLSKGDKILVLESGRFALGWGNAAGF
                     LGVEVEVLKGDWSRAVRPAEVEARLRKDKAGKIKAILVAHIDTSSGVVNDIEAIGKAI
                     RAASHNALFMVDAVASLGCVPFGMDAWGVDVAMSGSQKGLMTPPGLGFVAANERAREV
                     HKQAKLRTPYWDWTARDGKAHYQKYAGTPPEHLLFALRAALDMIFAEGFNKVFRRHRL
                     LAEAVRRAVAVWAEGKAFDFNISKPNERSDTVTTILMADGRNPGPLQDYCNAKCGVIL
                     GAGFGEMAGKAFRIAHMGHVNAPAVLGTLGVVEMALKALGIPHRSGGVEAAIGWLGKS
                     VKA"
     gene            4652..6454
                     /locus_tag="VLJ17_08755"
     CDS             4652..6454
                     /locus_tag="VLJ17_08755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSV23103.1"
                     /translation="MEPTNIAAPDYFHKVVDCQWACPAHTPVPEYIRLIAAGRYSDAY
                     MINWKSNVFPGVLGRTCDRPCEPACRRGRVEKEPVAICRLKRVAADFKGDIEARLPRP
                     AQRNNGKRIALVGGGPASLTVARDLAPLGYACVVFDGDPKAGGMIRTQIPRFRLPESV
                     IDEECDYILNLGIEFRGGHRIDSLKKLLAEDFDAIFVGSGAPRGRDLDIPGRREAAKN
                     IHIGIDWLSSVSFGHIDKIGKRVIVLGGGNTAMDCCRSSRRLGGEDVTVVVRSGFEEM
                     KASSWEKEDAMHEGIPILNFLVPKEFTHDDGRLTGITFEKVKAEYDAKGRRRLVPSGE
                     PDKHIPCDDVLVAVGQENSFPWIERDIGIEFDKWDMPKVDPKTMRSTNPKVFFGGDAA
                     FGPKNIIWAVAHGHEAAVSIDMMLSGEDINSRPLPAVTVMSQKMGIHEWSYDNEISPD
                     KRLRVPLRDKVVALKDIKAEVELGYDVQLALKEADRCLNCDIQTVFTASLCIECDACV
                     DICPMDCITFTADAPEADLRSRLKAPAQNLAQDIYIADGLKTGRIMAKDEDVCLHCGL
                     CAERCPTGAWDMKKYLIDMTHAGSKCQHEARSAA"
     gene            6424..>7368
                     /locus_tag="VLJ17_08760"
     CDS             6424..>7368
                     /locus_tag="VLJ17_08760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HSV23104.1"
                     /translation="MPARSPLCSVNDFVVRFANVNGSGSASANELFARAVLRMGVPVS
                     SRNIFPSNIQGLPTWYEVRICEDGHLGARGGYDLMVAMNPQTWDKDVAGIEPGGYLFY
                     DSTKPLPASKFRDDVVVLGVPLTAICNREYSDPRQRQLFKNIIYLGALSALLDIDPAV
                     IEALFLEQFKGKEKLIGANKRALALGRDWVLANLEARPDMERPCGLQIKRADKVGDRI
                     YLEGNQAAALGAVYGGATVCAWYPLTPSSSLADAFTTYCAKLRHDKDGKAKYAIIQGE
                     DEIASIGIVVGAGWNGARAFTATSGPGISLMQEFCGLAY"
BASE COUNT         1480 a         2229 c         2241 g         1418 t
ORIGIN      
        1 tggatgccgg caagctccgc catcttgcgc tgcgaagtga tataggtgtc gaaatgcggc
       61 acatcgttca caaagttgaa tgcagtgcca ccggaatacg cgaccgtgag tggccggccg
      121 ccgtcgttca cctggaagaa catcgatacg gttccaggcg tatgaccggg cgtcagcgcc
      181 agcgtaaccc acgcgtcgcc gagcgtaacc ttttggccgt cggtcgcaac gatgtcgcgc
      241 ttgggcttgc cgttcggata ttgattgacg gatttttcga tcgaatccca atctggaccg
      301 cccatgatga tgcgggcacc gaggcgatcc tgcatgagct tcgcaccgcc gacgtgatcg
      361 ccgtgggcat gggtgatgat gacgtatttc actgcgccag gatcaagccc gagctttctc
      421 aggccgccta tgattgcctc ttcggaggcg taatcgtaga gcgtatcgat taaaatgata
      481 ccctcactcg tcgtcagcgc ccaagacgaa tgaattttgg tgcctacaaa atagacattg
      541 tcgaacactt tcgcgggctc ggtgaaccag gtggcgcgat caggcggagg cggcggccgc
      601 acatccgcac ccggagccgt ctgcggcgcg atgcagatgc gggcgagcgt gccggtgaag
      661 tcagaccccg ccgctgcctt ggcggccgcc agatgggcat cgaccgtgtt cgcggccggc
      721 tgcgcgacgg cgcttgcggc gcccagtgcc gcgacgatcg ccagcgccgc accaatttgg
      781 cgttccatcg tttcctccca gctgcgtata ttggcgcgat cctgccatag cacatatgac
      841 gatcgaccat gcgacgaagg ttggacctcc gtgtaaccgc ggtcaagcat caccgtgacc
      901 tggaaatgcg gcctcgggag cgcgggcgtc cccctctcgt ccaagaaagg aacacgcggt
      961 cggatgcccg tgcgctgttc acctcagaat caacgagaat tgatcttgcc gatcggtccg
     1021 cgtctatgcg gcccgatctt ccgaggttac gaaccggcgt ccgctaccga tcctattctc
     1081 gcgcttgcaa ggaggttcca tgctgtcacg tcgttcgatc ttagttgacc ttcggagcgg
     1141 gctcggcgct tccattgctt gcactcggaa atgctgtcgc gcggcgctct gatgcgaggg
     1201 cgaagtgcgc tcacggcggc agggcatcaa gatggcattg ggcttgacct gtgtgacaat
     1261 cggggttctg gtgctgaccg gtttcgacaa ggccatcgag accgcggtgg tcgaagcttc
     1321 gccttcatgg ttgacggacc tcaccacgcg attttgaaat tcatccaata ttatctgtta
     1381 agatgatctg gccacggaga gcgtcatgaa tacgggcagc aggctcatca tcgcgaccat
     1441 tacggtcacg atcgccggag cggtgcagag ccgtgccggc ggcgaccgcg tcgtatttcc
     1501 ggagaactac gcaaagggtg tgcgttacct cacgctcgac aagccggacg gcagggatat
     1561 ccacgacttc tacgccaacc ccgcggccgc tgaagccgcc aggaaggggg cgccgcttcc
     1621 ggatggcacg gtgatcactg tcgtacacta tgctgcgcaa cttgacgccg aaggcaagcc
     1681 gaccaaggat gtcgacggtc gattgaccag gaccgacgag attcttggtt atgcggtcat
     1741 ggagaagcgc gccggatggg gcgccgccta tgtggaacag gtgcgaaacg gcgactggga
     1801 gtatcaggct ttccgtccca ataagacggt caacccgaat gccaatttga cgtcctgctt
     1861 cacctgccac aggtcacagg ccggccacga tttcgtcttc acgcacgaca acctcaaggc
     1921 cgcagcacca tagaggcgca tcgactaaga cgatcaggga ggacatcatg aatatatgca
     1981 gcaagctcac catcgcaacc gttgcggtta cgatcaccgg attggcggtt gtgaaggtcc
     2041 gggccggcgg cgaccgtgtc tcctttccgg agaactatgc caagggcgtg gtctatctga
     2101 cgctcgacaa gcctgacaac aaacaggtcc gcgaatattt caccagctcg gcagccgccg
     2161 atgccgccaa gaagggagtg ccgcttccgg acggcaccgt gatcaccgcg gtgcaatatg
     2221 ccgcgcagct tgatgcacaa ggaaacctgg ccaaggacgc caacggccgc ctcatcaaga
     2281 ccaacaatat tgtgggctac gctgtgatgg agaagcgcgg cgggtggggc gccacctatc
     2341 cggaaaacgt acgcaacggc gactgggagt atcaggcctt ccgcgccgac cagactgcga
     2401 atcccaacgc caacctatcc gcctgcttca actgccataa gccgcaggcc gaccaggatt
     2461 tcgtcttcac ccatgacagc ctcaaagtcg cggcgcggtg agtacggcgt agattcccat
     2521 gagaacctgt catctggctc gctgacaggt tgcggctgca tcggcggccg tccttcgcgc
     2581 caggcagctc gctgccggcg tggcggtcgc gcctgaggag cgccctcatc atttccgatt
     2641 ttggttgaaa tggcgcaaat ccagtggggg ctgatccttc cgcagcggca tgaggtgacc
     2701 gccaaaacca catcgtcagc gcgatcgagg cgataaagct tcgatagtgc atgggccgtc
     2761 cctccggtca ctagcgcatt tcccgattac gctgggccat tttctacgga gttatggcag
     2821 agaatgtgga tgcccgcgac gcgcgggcca tgaccaagca gagctagatt caatcatatc
     2881 gggaccggtt ctagtagatc agcacattgc gtccgggagg ctgaggttag ggaccactga
     2941 gaccacacag ccccagaagt cctcttgacc gctgattacc gaccactaag acctggcgtg
     3001 cactatttct gaatccttga agagggcaaa atggttgttc gagcggggcg cgaattcctg
     3061 gccatcccgg ggcccaccac cgtgccggac gaagtgctgc gcgccatgca ccggccggcg
     3121 atcgacatct atgcgggccc acttttggcg cttactgaca gcctgctggc cgatatgagc
     3181 cagctgtttc gcaccaaggg gcgctcctac atctacatcg ccaacggtca cggcgcctgg
     3241 gaggcggcgc tcaccaacgt cctatccaag ggtgacaaga ttctggtgct ggaaagcggc
     3301 cggtttgccc tggggtgggg caatgctgcg ggctttctcg gcgtcgaggt ggaggtcctc
     3361 aagggagatt ggagtcgcgc tgtgcgcccg gctgaagttg aagctcggtt gcgaaaggac
     3421 aaagccggta aaatcaaagc gatcctggtg gcccatatcg atacctcttc gggagtcgtc
     3481 aacgacatcg aggccatcgg caaagccatc agggccgcca gccacaacgc attgttcatg
     3541 gtcgacgcgg tcgcatcgct gggatgtgtt ccattcggga tggacgcatg gggcgtcgac
     3601 gtcgccatgt cgggatctca gaagggcttg atgacgccgc ctggcctcgg ctttgtcgcc
     3661 gccaatgaac gcgcccgcga agtgcacaag caagccaagt tgcgaacgcc ctattgggat
     3721 tggaccgcgc gagacggcaa ggcgcattac cagaaatacg ccggcactcc gcccgagcat
     3781 ctgcttttcg cgttgcgggc tgcgctcgat atgatttttg cggaggggtt caacaaggta
     3841 ttccgccgcc accgtttatt ggctgaggcg gtgcgccgtg ccgttgcggt gtgggcggaa
     3901 ggtaaggctt tcgatttcaa tatctcaaaa ccaaacgagc gctcggatac ggtgacgacg
     3961 attctcatgg ccgatggacg caatcccggc ccactgcagg attattgcaa tgccaaatgc
     4021 ggtgtcattc tcggggcagg atttggggaa atggcgggca aggcgttccg cattgcccat
     4081 atggggcatg tgaacgcacc tgcggtgctt ggcacactag gcgtcgtcga aatggccctc
     4141 aaggcgcttg gcatcccgca ccgcagcgga ggcgtagagg cggcgatcgg ttggctagga
     4201 aaaagcgtga aggcttaagg ggatatcgca gggccctggt tgcggccatt ttgcggcagc
     4261 gctccggcgt ggtgcgtcgc acaatgccga tccgagccac gactgttcac cattcgctaa
     4321 cggtgaataa acataatttt atatttcaaa ccctggcctt ctggttgcaa aagcggtagt
     4381 tgggacgcgc gaaatctgcg gggctggagg tgcatttcga acttgctcaa cgcgttagag
     4441 cacgaggcca tgcgaccaaa gccgggtttt ctgccgttta cacgtcgcat cggggtcacg
     4501 tcgacttggt ataccttatg ccgatagtga ttccgaccag ccccgtctaa actgcagttc
     4561 acaacagcag atcaacaacg atccagcgga ggagatgtta gaggattgcc gcaggctgct
     4621 gcgggccaag accctttgca cgaggagttg aatggaacca accaacatcg cggcgccgga
     4681 ctatttccac aaggtggtcg attgccagtg ggcctgcccg gcgcacacgc cagttccgga
     4741 atacatccga ttaatcgcgg ccggacgcta ttccgacgcg tacatgatca attggaaatc
     4801 gaatgtgttc ccgggcgtcc tcggccgcac ctgcgaccgg ccgtgcgaac cagcgtgccg
     4861 gcgcggccgt gtcgagaagg aaccggtggc gatctgccgc cttaagcgcg ttgccgccga
     4921 tttcaagggc gatatcgagg cccgtctccc gcgcccagcc caacgcaaca acggcaagcg
     4981 cattgcactg gttggcggtg gtcccgcctc gctcacggtc gcgcgcgacc tagcgccgct
     5041 cggctacgcc tgcgtggtgt ttgacggcga ccccaaggcg ggcggtatga tccgcactca
     5101 aattccgcgc ttccgcttgc cggaatccgt cattgatgaa gaatgcgatt acatcctcaa
     5161 tcttggcatc gagttccgcg gcggccatcg catcgacagc ctcaaaaagc tcctcgccga
     5221 ggacttcgac gctattttcg tcggctccgg cgctccgcgt ggacgcgatc ttgatattcc
     5281 gggccgccgg gaagccgcca agaacattca catcggtatt gactggctgt ccagcgtctc
     5341 gttcggccat atcgacaaaa tcggcaagcg cgtcatcgtg ctcggcggcg gcaacaccgc
     5401 catggattgc tgccgttcct cgcgccggct cggtggcgag gacgtgaccg tcgtggtgcg
     5461 ctccggcttc gaggagatga aggcctcgtc gtgggagaag gaggacgcga tgcacgaagg
     5521 cattccgatc ctcaattttc tggtgcctaa ggagttcaca cacgatgacg gccgcctcac
     5581 cggcatcacc ttcgagaagg taaaggccga atacgacgct aagggccggc gccgtctcgt
     5641 gccctcgggc gagcctgata agcacattcc gtgcgacgac gtgctcgtcg cagtcggcca
     5701 ggagaattct tttccctgga tcgagcgcga cattggcatc gagttcgata agtgggacat
     5761 gccgaaggtc gaccccaaga ccatgcgctc gaccaatccg aaggttttct tcggcggcga
     5821 tgccgcgttc gggccgaaga acatcatctg ggccgtcgcc cacggccatg aggccgcggt
     5881 ctcgatcgac atgatgctca gcggcgagga tatcaattcc cgcccgctcc cggccgttac
     5941 cgttatgagc caaaagatgg gcattcatga gtggagctac gataacgaaa tctcgcctga
     6001 caagcgccta cgcgtgccgc tgcgcgacaa ggtggtcgcg ctcaaggaca tcaaggccga
     6061 agtcgagctg ggctacgacg tgcagctcgc tctcaaagag gccgaccgct gtctcaactg
     6121 cgatattcag accgtattca ccgcttcgct gtgcatcgaa tgtgacgcct gcgtggacat
     6181 ctgcccaatg gactgcatca ccttcacggc tgacgccccc gaggcagact tgcgcagccg
     6241 actcaaggcg ccggcccaaa accttgctca agacatctat atcgcagacg gccttaagac
     6301 cggtcgcatc atggccaagg acgaggacgt ctgcctgcac tgcggtttgt gcgcggagcg
     6361 ttgccccacc ggagcgtggg acatgaagaa atatctgatt gacatgactc acgcaggatc
     6421 gaaatgccag cacgaagccc gctctgcagc gtaaacgatt tcgtcgtccg ctttgccaac
     6481 gtcaacggat cgggttcggc gagcgccaat gagctgttcg cccgcgcggt gctgcgcatg
     6541 ggcgtgccgg tgtcgtcacg caacattttt ccgtccaaca tccaaggcct gccgacttgg
     6601 tacgaggtgc gcatctgcga ggatggccat ctcggcgccc gtggcggcta cgaccttatg
     6661 gtggcgatga acccgcagac ctgggacaag gatgttgctg gcatcgagcc gggcggctac
     6721 ctgttctatg attccaccaa gccgttgccg gcctcgaaat tccgcgacga cgttgtcgtg
     6781 ctaggcgtac cgctcaccgc catatgcaat cgcgaataca gcgatccacg ccaacgtcag
     6841 ctgttcaaga acatcatcta cctcggcgcg ctgtccgcgc tgctcgatat cgatccggct
     6901 gtcatcgaag cgctgttcct ggagcagttc aagggcaagg agaagctgat cggtgcgaac
     6961 aagcgcgcgc tcgcgctcgg tcgcgactgg gtgctcgcca accttgaggc gcgacccgac
     7021 atggaacgtc cctgcggcct ccagatcaag cgcgccgaca aggtcggcga ccgcatctac
     7081 ctcgagggca accaggccgc cgcgctcggc gccgtctatg gcggcgccac cgtgtgcgcg
     7141 tggtatccgc tcacgccatc gtcgtcgctg gccgacgcgt tcacgacata ttgcgccaag
     7201 ctgcgccacg acaaggacgg caaggccaaa tacgccatca tccagggcga ggacgaaatc
     7261 gcctccatcg gcatcgtggt cggcgccggc tggaacggcg cccgcgcctt cacggcgact
     7321 tccggccccg gcatctcgtt gatgcaggaa ttctgcgggc tcgcctat
//
LOCUS       DATILV010000382         4293 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_860884, whole genome shotgun sequence.
ACCESSION   DATILV010000382 DATILV010000000
VERSION     DATILV010000382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4293
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_860884"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..787)
                     /locus_tag="VLJ17_08765"
     CDS             complement(<1..787)
                     /locus_tag="VLJ17_08765"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV23105.1"
                     /translation="MSGKLRLTVACGDYEIVRALKEGTVTADGLDLVLLTGMGSMERH
                     WRMARKNEFDVCEINVGAYFMSRDRDKALTAIPVYLHRRFRHGFVFVNALAGIREPKD
                     LVGKKIGGTNFQPASNIWMRGILEENYGLPHRSATWVVEREEDVEFNVPEGLRIEMIP
                     PGKRLDIMLAEGEIPAMLSPTLPRRFVEGDKRIVRLFADYKEIERDYYRETGIFPIMH
                     VTAVKQDIVDKYPWVTSNLTKAFEEAKNIAYRRMANPRVVPLAW"
     gene            complement(800..1582)
                     /locus_tag="VLJ17_08770"
     CDS             complement(800..1582)
                     /locus_tag="VLJ17_08770"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV23106.1"
                     /translation="MASKRRFTVRILMRRPWLARLLVIAALFALWEIAARWFVDPLFL
                     SPPSQVVASLDKVFSTRGVPAALQLTLFELTVAFMFAVAIGLVLGLAIGLQPLVRRSF
                     FPIVLLLYGMPQVTILPLFILFFGIGAASKIAFGVTHGVFPVIVTVVAGVQNLKPILL
                     TGARSMGASRWQIFRHVVFPHMVPSFFAGMRLGMSGVLLGVLLAELYVSIAGIGYFTT
                     LFTQNFDPTKLLGLIGALAAMAIVLNALVRRAEAHFAKWRTE"
     gene            complement(1583..2359)
                     /locus_tag="VLJ17_08775"
     CDS             complement(1583..2359)
                     /locus_tag="VLJ17_08775"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV23107.1"
                     /translation="MAGDAAARRDRGALASRLIQAGFLVGLVVVWYLAATRWGVNRLL
                     LPNPVAVYDNLLDILRSGEFIDDLETTLGELAIAFAISVAGGLTLGYLISRSAYWIKV
                     FEPLFAAIYSIPIILFLPLFVLFFGLGPASKIALGASISFFPIVINTIAGFGHVDRLF
                     VTAARSMGASDYHLFRHVLLPAASPVVLTGLRMGFTTALLSIIGSETLASLAGLGHRI
                     VHLAEAMDMARMFAYVVFVIAIAVTLNAVVSALEARGKRN"
     gene            complement(2359..3198)
                     /locus_tag="VLJ17_08780"
     CDS             complement(2359..3198)
                     /locus_tag="VLJ17_08780"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV23108.1"
                     /translation="MATSEAAIKIRGVFHRFGEEGDRRFVRALADTSLDIARGELLCL
                     IGPSGCGKSTLLNIVGGLMAPSSGTVEVCGQEVRGPLPRDIAFVFQESSLFPWNTVVE
                     NIELGMMFQGVAKSERAARAAASLEAVGLKEFAEHYPAQLSGGMRQRAALARALSLET
                     PILLMDEPFGALDEQTRMILGEDLSVLLARSRKTIVFVTHSLGEAVFLADRVAVFSAR
                     PGSIKQVIEVDEPHPRKPEFVTSAKFTSLRNQLYGLLHDEIRKAVQQSSVADAAQDGI
                     GPT"
     gene            complement(3216..4187)
                     /locus_tag="VLJ17_08785"
     CDS             complement(3216..4187)
                     /locus_tag="VLJ17_08785"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV23109.1"
                     /translation="MQPGWKLVVWWLAIVVGAASLSGPTARAQTKIRLGKAQAQNFAF
                     VAADVGIAAGIFQRHGIDLEIANFGGDARLVQAMSADAIDVAFGGGPTIAFEVKGAPM
                     LAIAVLADRPHTIMLVVAKDGPVKTEDDLKGRPVSVSTTGSLTYWLAQELSRSHGWGA
                     DGIKIVPLGTTTAQAAALKTRQVDGVVTETSTVLRLVEEGTGRILVRFGERIPEFHVH
                     VVFARKAFIDRNPGALRNFVQAILESVQYMREHRDQTIDIAMRVAEVSKSVATANYEE
                     LMPIFNPTGRFDAKALDVLARSFVEMGLLTEKPDMGTLYTDAFLPKK"
BASE COUNT          947 a         1323 c         1260 g          763 t
ORIGIN      
        1 cccaggcgag cggaacgacg cgtgggttcg ccatgcggcg ataggcgatg ttcttggctt
       61 cctcgaatgc cttggtgaga ttgctcgtga cccagggata tttgtcgacg atgtcttgct
      121 tgaccgcggt cacatgcatg attgggaaaa ttccggtctc gcggtagtag tcgcgttcga
      181 tctccttgta gtctgcaaac aaacgcacga tgcgcttgtc gccttcgacg aaacgtcgtg
      241 gcagggtggg cgacagcatt gcgggaattt cgccctcggc caacataatg tcgagccttt
      301 tgccgggtgg aatcatttcg atgcgcaggc cctccggtac attgaactcc acgtcttcct
      361 cacgctccac cacccaggtg gcgctgcggt gaggcagtcc ataattttcc tccaggatgc
      421 cgcgcatcca gatattggat gcgggctgaa aattggtacc accgatcttt ttgcccacaa
      481 ggtccttcgg ctcgcggatg cccgccaagg cgttgacaaa aacaaagcca tggcgaaatc
      541 ggcgatgcag atacaccggg atggcggtca gggccttgtc gcgatcacgc gacatgaaat
      601 aggcgccgac attgatctca caaacgtcga actcattctt gcgcgccatg cgccaatgtc
      661 gctccatcga tcccatgccc gtaagcagca cgaggtcgag accgtcggcc gtcacggtgc
      721 cttccttgag cgcacgcacg atctcgtaat caccgcacgc gacggtcagt cgcagcttgc
      781 ccgacatgct cttatccgct cattcagtgc gccacttggc gaaatgggct tcggcgcgcc
      841 gcacgagggc attgagcacg atcgccatgg cggcgagcgc gccgataagt cccaacagct
      901 tggtgggatc gaagttctgg gtgaacaggg tggtgaaata accgataccg gcgatcgaca
      961 catacaactc ggccaacagc acgccgagca gaacgccgct catgcccagg cgcatgccag
     1021 caaagaagct cggcaccatg tggggaaaga cgacatggcg aaaaatctgc cagcggctcg
     1081 cccccatgga acgcgcgccg gtgagtagaa ttggcttgag gttctgcacg cccgccacca
     1141 ccgtgacgat aaccggaaac accccatggg tgaccccaaa ggcgatcttg gaagccgccc
     1201 cgatgccgaa gaataaaatg aacagcggca ggatggtgac ctgcggcatg ccgtagagca
     1261 gcagcacgat gggaaaaaag ctgcgacgca cgaggggttg cagcccaatt gcaaggccaa
     1321 ggaccagccc gatcgcaacc gcaaacatga aggcgaccgt gagttcgaac agggtcaact
     1381 gcagtgcggc cggaacgccg cgggtgctga agaccttatc gagcgaagcg acaacctgcg
     1441 acggcgggct caagaacaac ggatcgacga accagcgcgc agcgatttcc cacaatgcga
     1501 acagcgccgc aatgaccaag agtcgcgcga gccatggccg ccgcatcaga atacggactg
     1561 tgaaacgtcg ctttgaagcc attcagtttc gcttcccccg cgcttcgagc gccgatacga
     1621 cagcattgag ggtcaccgcg atggcgataa cgaaaaccac gtatgcgaac atgcgggcca
     1681 tgtccatcgc ctcggcgaga tgtacgattc ggtgaccaag gccggcgagt gaggcgagcg
     1741 tctcgctgcc gataatcgat aacagcgcgg tggtgaaccc catgcgcagg ccggtgagaa
     1801 ccaccggaga tgcagcgggc aacagcacat ggcggaacag atgatagtcc gatgccccca
     1861 tcgaacgtgc cgccgtcacg aacagacgat cgacatggcc gaaccccgca atggtgttaa
     1921 tcacgatcgg aaaaaagctg atcgaagcgc cgagcgcgat cttggaagcc gggccgagac
     1981 cgaagaacaa cacgaacagc ggcaggaaca agatgatggg tatcgaatag atcgcggcga
     2041 acagcggctc gaagaccttg atccaatagg cagagcggct gatcaaataa cccaacgtga
     2101 ggccgccggc gaccgagatc gcaaacgcga tcgcaagttc gccaagcgtc gtttcgagat
     2161 cgtcaatgaa ttcacccgat cgcagaatat ccaatagatt gtcatagacg gcgacggggt
     2221 tcggcaacag cagccggttg acgccccagc gggtcgccgc caagtaccag acgacgacga
     2281 gaccgaccag aaagcccgcc tgaatgaggc ggctcgccag cgcgccgcga tcgcgtcttg
     2341 cggctgcatc gcccgccatt atgtcggccc gattccgtct tgcgcagcgt cggcgacaga
     2401 tgattgctgc acggccttgc ggatttcatc gtgcagcagg ccatagagct ggttgcgcag
     2461 cgacgtgaac ttcgccgagg tcacgaattc cggcttacgt ggatgtggtt cgtcgacctc
     2521 gatcacctgc ttgatgctcc cgggtcgtgc cgaaaacacc gcaacgcgat cggcaagaaa
     2581 caccgcttcg cccaggctgt gggtgacgaa cacgatggtc ttgcggctgc gcgcaagcaa
     2641 taccgaaagg tcctcgccca ggatcatgcg ggtctgttca tcgagcgcgc cgaacggctc
     2701 gtccatcagc aggatcggcg tttccagact gagggcacgg gcaagcgccg cgcgctggcg
     2761 catgccgccg gaaagttgcg ccggataatg ctcggcaaat tccttgagcc cgacggcttc
     2821 gagcgaagcg gcggcgcgcg ccgcacgttc ggactttgcc acaccttgaa acatcatgcc
     2881 gagttcgatg ttctcgacca cagtattcca gggaaacagc gaactctcct ggaacacaaa
     2941 agcgatgtct cggggcaggg gcccccggac ctcttgaccg cacacctcga ccgtgccgga
     3001 actcggcgcc atcaagccgc cgacgatgtt gagaagcgtg ctcttgccgc aaccgctcgg
     3061 cccgatgaga cacaacagct cgccacgcgc gatatcgagc gaggtatcgg cgagtgcccg
     3121 cacgaaacgc cggtcgcctt cctcaccgaa ccgatggaaa acgccgcgaa tcttgatcgc
     3181 ggcctcagac gtcgccatcg cgtcatccgt gtgcatcatt tcttcggcag aaacgcgtcc
     3241 gtgtagagcg tgcccatgtc cggcttttcg gtgagcaatc ccatttccac aaaggaacgc
     3301 gccagcacat cgagcgcctt ggcgtcaaag cgaccggtcg ggttgaagat cggcatcagt
     3361 tcctcataat tggcggtagc gacggatttg gagacttccg caacccgcat ggcgatgtcg
     3421 atggtctgat ccctgtgttc gcgcatgtat tggacgcttt ccagtatcgc ctggacgaaa
     3481 ttgcgcaatg ctcccggatt gcggtcgatg aatgccttgc gggcgaacac cacatgcacg
     3541 tgaaattccg gtatccgctc gccgaagcgc accaaaatgc ggcccgttcc ctcctcgaca
     3601 aggcgtagga ccgtggacgt ttccgtcacg acgccatcga cttgtcgggt cttcaacgcc
     3661 gccgcttggg ccgtggtggt gccaagggga acaatcttga tgccatccgc tccccagcca
     3721 tgggagcgcg acagttcctg ggcaagccag taagtgagcg accccgtcgt tgacacgctt
     3781 acggggcgtc ctttgagatc gtcttcggtc ttcaccggtc cgtccttcgc caccaccaac
     3841 atgatggtgt gcggtcgatc tgcgagcacc gcgatcgcca gcatcggcgc gcccttgacc
     3901 tcgaacgcga tggtgggtcc gccgccgaac gcaacgtcaa tggcgtcggc gctcatcgcc
     3961 tgtaccagcc gggcgtcgcc gccaaaattc gcgatctcga gatcgatccc gtggcgctgg
     4021 aaaatcccgg ccgcgatacc gacgtccgcg gccacaaagg cgaagttctg cgcctgcgct
     4081 ttgccaaggc ggatttttgt ttgcgccctt gcagttgggc cactcaatga ggccgcgccg
     4141 accacaatgg ccaaccacca caccaccagt ttccaacccg gctgcatgtt gcttcccctc
     4201 cgatccatag gactgcgatc ataagctcaa aagtttccag gcgcgcgcgc gaaggaagaa
     4261 tttttctcaa ccgcgtcagt agcttttgca aac
//
LOCUS       DATILV010000383         5638 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1881835, whole genome shotgun sequence.
ACCESSION   DATILV010000383 DATILV010000000
VERSION     DATILV010000383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5638
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1881835"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..236
                     /locus_tag="VLJ17_08790"
     CDS             <1..236
                     /locus_tag="VLJ17_08790"
                     /inference="COORDINATES: protein motif:HMM:NF016149.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="copper resistance protein CopC"
                     /protein_id="HSV23110.1"
                     /translation="ISLWFTQNLESAFSTIDVLDSNGARMNAGNAVVDGSDRKLLRVP
                     VKVLSPGTYTVKWHVLSVDTHTTEGNFTFRVGP"
     gene            246..1193
                     /gene="copD"
                     /locus_tag="VLJ17_08795"
     CDS             246..1193
                     /gene="copD"
                     /locus_tag="VLJ17_08795"
                     /inference="COORDINATES: protein motif:HMM:NF033808.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006825 - copper ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis membrane protein CopD"
                     /protein_id="HSV23111.1"
                     /translation="MNEPLVIARAFHLASTLLLAGTISFRCCVAAPAFRAKACSALED
                     GVRIRLARIVWAALAVAMISGAAWLVFLASEISDVPVADAVSRGLAWIVLTQTEFGDD
                     WMLRLEMASLLAALLLLPSINPGFAYATDIICALLAAGLAGSLAWAGHAAATEGFDGT
                     VHLAGDALHLVAAGAWLGALWPLAILLGGARRAGDPVSAAIAHQATRRFSILGIISVA
                     AILATGVVNTYEILGTLALSLGTNYNRLLLVKIGLFIAMVCVAAVNRQRLTPRLSNAR
                     HRLDAIRQLERNSLTEAGLGLLILGIVAVLGRIPPHLHE"
     gene            complement(1198..1923)
                     /locus_tag="VLJ17_08800"
     CDS             complement(1198..1923)
                     /locus_tag="VLJ17_08800"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV23112.1"
                     /translation="MSNPIRTAVIDDHPLFREGVAKLLARTPGLEIVADGSTATDAVN
                     IAQQLLPDVILLDLNLPDNGVGAASTIAREHPAVRIIILTASDCDSDVATMLQLGVHG
                     YLLKGCTGQEIVRAVQRVYAGEFYVTPSLAARLLTQMSTPAPKVEEDSDDLSSREEII
                     LAQVSKGLTNKEIARGLNLREKTVKHYMTNIMQKLGARNRLEAVLMGQKRQRSSRPLP
                     HVNPTASMTPDSSTYPMKSTVPQ"
     gene            2996..5356
                     /locus_tag="VLJ17_08805"
     CDS             2996..5356
                     /locus_tag="VLJ17_08805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007800481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HSV23113.1"
                     /translation="MYISSKASRIRQREAQNARNNRAEIVKALSLGQITRRDLYKWGL
                     LTTTGAIALKNGLSPFARSAFAAVPTGTPLSPLFGAQKFTQRLNRLALQTPQPLTRIP
                     HDGNPNNDTARWPAAAGELLRDGTAKDAKRLSYHDDFSNNPGNPNFVNPITGRGPIEG
                     RAPTDPKTGLAFFAHQRWDEFFPKVGYVMSWTQCLQPADDPAGVGTKIHPNFPAQAPN
                     SVWTYGTGNTHAGTLPPFLIQVRYGEPTITRIYNNTPVDRAQNNGFGRNEQQLHYHNA
                     HNGAESDGASNSHHFPGTFYDYRWSGTLARRDKINTDAIDPRASAPDDNGGLVKVAGD
                     WREIQGTMWAHDHRFFFTAENVYKGNLGMVTMYSGRDRGNEVLNDGVNLRLPSGSHSK
                     KGWGNLDFDVNLVVSDAATDPTGQLFFDIFTTDGFVGDIEMVNFQYAPFMEVLPRKYR
                     FRILSAGMSRFIQLQIADSFGNAVPFLQICNDGNLFVNPIPLTSLDQQGTAERYDIIV
                     DFSRFRIGDVAYLVNTLQSTTGLKPDGQVRLAQAFADADNNDPAVGRILQFRIVSQVQ
                     SVDDPTVTLRATDPDPSQVPTVLTEQIPIVTPVRTRTVMWGRIGTGDSVQPNGTCIPD
                     CATENGFPWTVVVDPQRGGQPHSMNANRVSLEYQKPGDIEHWTYINAGGGWDHPIHLH
                     FEEGITLNRGNQAIPNTELNVRKDVWRLRPAGQVTFQIQFGEYGGAYVNHCHNTVHED
                     FALLMRIQLLNGFVGTPQAIVTRTPNPSPDGVTYTDPIVLPEAVSP"
     gene            5425..>5638
                     /locus_tag="VLJ17_08810"
     CDS             5425..>5638
                     /locus_tag="VLJ17_08810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23114.1"
                     /translation="MKRPLLLATAVVAIVAISTAVAILSPAFRTQSLSPLPGAAAASE
                     GSVRTAEGSKAIDPEPQSGIPAQAASQ"
BASE COUNT         1132 a         1714 c         1653 g         1139 t
ORIGIN      
        1 ttatatcgct gtggttcaca caaaatctgg agagcgcgtt cagcaccatc gacgtgcttg
       61 attccaacgg cgcgcggatg aatgccggca acgccgtggt cgatgggagc gatcgcaagc
      121 tgctgcgcgt gccggtgaaa gtgctgtccc ccgggacata taccgtgaaa tggcatgtac
      181 tgtctgtgga tacccatacc acggagggca atttcacttt tcgcgtcggt ccgtgaggtt
      241 acgcattgaa cgaaccgctg gtcatagccc gcgcgtttca tctggcatcg acgttgttgc
      301 tggccggaac gatctcgttc cgttgctgcg tcgcagcgcc ggcattccgg gcgaaagcct
      361 gtagtgccct cgaagatggc gtgcgcatcc ggctcgccag gatcgtctgg gcggcgcttg
      421 ccgtcgcaat gatatcggga gcggcctggc ttgtgttcct cgccagcgaa atcagcgatg
      481 tgcccgtcgc cgacgcagtg tcgcgcggcc ttgcgtggat cgtgctgacg cagaccgagt
      541 tcggggacga ctggatgctg cgcctggaga tggcatcgct gctggcggcg ctgctgttgc
      601 tgccgtcgat caatcccggg ttcgcgtatg ccaccgacat aatctgcgct ttgctggcgg
      661 ccggtctggc gggaagtctc gcgtgggctg ggcacgctgc ggcgacggaa gggtttgacg
      721 ggacggttca cttggccggc gacgcgctgc atctcgtcgc cgcaggcgct tggctcggtg
      781 cgctgtggcc gttggccatc ctgctcggcg gcgcccgccg cgccggcgat cccgtgtcgg
      841 cggccatcgc gcatcaggcg acgcgccggt tctccatcct gggaatcatc agcgttgccg
      901 ccattctggc gaccggtgtc gtcaacacct acgagatatt gggaaccttg gcgctctcgc
      961 tcggcaccaa ttacaatcgc cttctgctgg tgaaaatcgg ccttttcatc gccatggtct
     1021 gcgtcgccgc cgtgaaccgc cagcgcctaa cgccacgcct gtcaaacgcg cgccaccgcc
     1081 tggacgcgat tcgacagctc gaacgcaaca gcctgacgga ggcgggatta ggtcttctga
     1141 tattggggat cgtcgccgtc ctcgggcgta ttccgccgca cctacacgaa taacagctca
     1201 ctgcggtacg gtcgatttca tcggataggt ggagctgtcg ggtgtcatgg atgctgtcgg
     1261 gttgacatgg ggaagcggtc tggatgagcg ctgccgcttt tggcccatca acaccgcttc
     1321 gaggcgattg cgtgcgccaa gcttttgcat gatgttggtc atataatgct tgacggtctt
     1381 ttcccgcaga ttgagtcctc tggcgatctc cttgttggtc agccccttgc tgacctgggc
     1441 aaggatgatt tcctcgcgac tcgatagatc gtcagaatcc tcctccacct tcggcgccgg
     1501 cgtgctcatt tgtgtcagca gtcgcgccgc aagcgacggg gttacataga actcgcccgc
     1561 gtagacgcgc tgcacggcac gtacgatctc ctgtccggta cagcccttca aaagatagcc
     1621 gtgaacgccc agttgcagca tcgtcgccac atcgctgtcg caatcggaag cggtcaatat
     1681 gatgatgcgc acggccggat gctcgcgcgc aatcgttgat gctgccccga cgccgttgtc
     1741 gggcaggttg agatccagca gaataacatc cggcagaagc tgctgcgcaa tattgacggc
     1801 atccgttgcg gtgctgccat cagctacgat ttcgaggcct ggcgttcttg ctagcaattt
     1861 ggcgaccccc tcacgaaaca acggatggtc gtcaatgaca gcggttcgga tcggattaga
     1921 catgattcat cgccccggtg aatagcgaag ggggaccgcc gacaagcttc gcgcaaccgc
     1981 acacgcgttt gcttgccgtc cgaaacttcg ctttgagagt gtcgtcaccc tgaaggccgt
     2041 tgatgatcga acggctgaag tgaccttcga ttctgcagac agcaacgcgt ctggcgcggc
     2101 cattgttggt cggcgcgcgc gagccgattc gtcccatcgc ggggcaagaa agacttgccc
     2161 ttcgtttgtt tggagagggg cgacgaactc aagcatgacg cgtaactcac ccaacacaat
     2221 tacttttgtt ttcttttgca actcaaacct tgcagagaaa taagcgttta agaattatgg
     2281 caccatttat gtgtcatctg tttggcagaa gcatgtcttc aacaaaataa atcaatccgt
     2341 tgcatcataa atccatccgt cacttcaatt gtagaactag aatatgcttg tataagtagt
     2401 gattgctact cttggctagt attccgaatg gaccacagtg ggatctaggt ggcgttggct
     2461 gcgcgtgcaa agcattacgc cgcgcccgct gcgatggcgg cgggtccgat tggtggcatc
     2521 taagtggcaa ttagacggcg gcaattggga cggtttttgc gaatcgcggg ggcatgaacc
     2581 acaatcgcac gggcgtgaag aagcgccttt ggcatgacga tcgattgcgc ttgccgcacc
     2641 aaggtccata gagtgttgca ccaagggcgc tgcgccaagg tctatcgttg cgtgacttaa
     2701 gtccgcttgc gattggcact ttcctccaat gcgacatagg acctcagccc cgcctgtcag
     2761 gccgtcgaca gctttctatc atttcgcgaa tatgactgca gtggggccgc attgagtttg
     2821 agaattgtgc gtaaagccaa agggggtttg ggttacgcaa atcttcaaat cggcttgcgg
     2881 aaagtttgac gttgcttcac gcgcccccgc cgtcgcgtga acagagtcgc gtgaacagac
     2941 gcgtgacgtg aaacagaaac gtgacacggg aacatcacaa gcggagggtt gattaatgta
     3001 catatccagt aaagcatcgc gcattcgaca gagagaggct cagaatgcgc gtaacaatcg
     3061 cgccgaaatc gtcaaggccc tgtcgcttgg ccagatcacc cgccgcgacc tctacaagtg
     3121 gggcttgctc accaccaccg gggcaatcgc cctgaagaac ggcttgagcc cgtttgcccg
     3181 cagcgcgttc gcagccgtgc cgaccgggac gccgcttagc ccgctgttcg gcgcgcaaaa
     3241 gtttacccag cgcttgaacc ggctcgccct gcagacgccg cagccattga cccgtatccc
     3301 acatgatggc aacccgaaca acgacaccgc gcgatggccg gcagcggcgg gcgaactcct
     3361 tcgggacggg actgcgaaag acgcgaagcg actgtcatac cacgacgatt tcagcaacaa
     3421 tcccggcaat ccgaattttg ttaatccgat cacgggccgc ggcccgatcg aaggacgcgc
     3481 tccgactgat cccaagaccg gcttggcctt cttcgcgcat cagcggtggg acgagttctt
     3541 ccccaaggtc ggctacgtga tgtcgtggac gcagtgcttg cagcctgcag atgatcctgc
     3601 gggtgtcggc accaagatcc atcccaattt tccggcgcag gctccgaaca gcgtctggac
     3661 ctatggaacc ggcaacaccc atgcgggaac gcttccgccg ttcctgatcc aggtacggta
     3721 cggtgaaccc accatcaccc gaatctacaa caacacgccg gtcgatcgcg cacagaacaa
     3781 cggcttcggc cgcaacgagc agcaactcca ctaccacaac gctcacaacg gtgcggagag
     3841 cgacggcgct tccaacagcc accacttccc cggcacattc tacgactacc gctggagcgg
     3901 gacactggcg cgtcgcgaca agatcaacac cgatgccatt gatccacgcg cctctgcccc
     3961 tgatgacaac ggtgggctgg tcaaagtagc cggcgattgg cgcgagattc agggcaccat
     4021 gtgggcccat gaccaccgct tcttcttcac ggccgagaac gtctacaagg gcaatctcgg
     4081 catggtgacg atgtacagcg gtcgcgatcg cggcaacgag gtgctcaacg acggcgtcaa
     4141 tctgcgtctg ccgagcggct cgcacagcaa gaaaggctgg ggcaacctcg acttcgacgt
     4201 caacctcgtc gtctcggacg ccgcaaccga cccgaccggc cagttgttct tcgacatctt
     4261 cacgacggac gggttcgtcg gcgacatcga gatggtgaac ttccagtacg ctccgttcat
     4321 ggaggtgctg ccgcgtaagt accgcttccg catcctgagc gccgggatgt cccggttcat
     4381 ccagctccag attgcggatt cgtttggcaa cgcggtgccg ttcctgcaga tctgcaatga
     4441 cggtaacctg tttgtcaatc cgatcccctt gacctcgctc gaccagcagg gcaccgccga
     4501 acgctacgac atcatcgtcg acttcagccg gttccggatc ggcgacgtag cgtacctggt
     4561 caacaccttg cagtctacga ccggcctcaa gcccgatgga caggtgcggc tggcgcaagc
     4621 ctttgctgat gccgacaaca acgacccggc ggtgggccgg atcctgcagt tccggattgt
     4681 cagccaggtt cagagcgtcg acgacccgac cgtgaccctc agggcaaccg atcctgaccc
     4741 gagccaggtt ccgacggtgt tgacggaaca gattccgatc gtcacgccgg tacgtacgcg
     4801 tacggtcatg tggggcagaa tcggcaccgg cgactcggtc caacccaacg gaacgtgcat
     4861 acccgattgc gccaccgaga acgggttccc gtggaccgtt gtcgtcgatc cgcagcgcgg
     4921 aggccaaccg cattcgatga acgccaatcg ggtttcgctc gaataccaga agcctggaga
     4981 tatcgagcac tggacctaca tcaacgctgg cggcggctgg gatcacccga tccacctgca
     5041 cttcgaagaa ggcatcacac tcaatcgcgg caaccaagcc atcccgaata cggagttgaa
     5101 cgttcgcaaa gacgtgtggc ggctgcgccc ggccggacag gtcacgttcc agatccagtt
     5161 cggcgaatac ggcggggcct acgtgaacca ctgccacaac acggtgcacg aggacttcgc
     5221 cctgctcatg cgcattcagc tcctgaacgg gtttgtcgga acgccgcaag ctatcgtgac
     5281 acgcacgccg aatccgagtc ccgacggcgt aacgtatacg gacccgattg tcctgcctga
     5341 ggctgtgtct ccctgatggc ttcacaatag tcgccgaagg gcatcgcaag atgcccttcg
     5401 gttttgaatt ccaaggagat gcagatgaaa cgcccgcttt tgttggcaac cgctgtcgtc
     5461 gcgattgtgg cgatctcgac cgcagtcgcg atattgtcgc cggcgtttcg tacacagtca
     5521 ctttctccgc ttcccggtgc ggcggcggca tcggaaggca gcgttcgcac cgcagaagga
     5581 agcaaggcga tcgatcccga accgcaatcc gggatccccg cgcaggccgc atcacaag
//
LOCUS       DATILV010000384         1740 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_601367, whole genome shotgun sequence.
ACCESSION   DATILV010000384 DATILV010000000
VERSION     DATILV010000384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1740
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_601367"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..330
                     /locus_tag="VLJ17_08815"
     CDS             <1..330
                     /locus_tag="VLJ17_08815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HSV23115.1"
                     /translation="TRMVGRNYGLGGIALVWQILLPAAFPSILAGLKIGWAFAWRTLI
                     AAELVFGTSSGSSGLGRYIYENKNQLEIPNVFAGLLTVILIGLAVENLIFRVVENRTV
                     RRWGMQT"
     gene            complement(341..661)
                     /locus_tag="VLJ17_08820"
     CDS             complement(341..661)
                     /locus_tag="VLJ17_08820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23116.1"
                     /translation="MVRMMNGRNWVAGAVVAIWFMAASSAQARVFILDDPYNPGEQVV
                     VDLKGCRGTEARLERLLPLLKHQQTTATSIAAAPAIAPSIQIAMASPVRAARSLPLML
                     GVGY"
     gene            complement(846..>1740)
                     /locus_tag="VLJ17_08825"
     CDS             complement(846..>1740)
                     /locus_tag="VLJ17_08825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HSV23117.1"
                     /translation="TKNAKTKVDGRIADIRDRERVIHLVKTFKPDILFHAAALKHVPL
                     LERDWDEGVKTNVFGSINVADAAAAAGAAGMVMISTDKAIEPISMLGATKRFAEMYCQ
                     ALDADFAARAVDRPPMRLIAVRFGNVLASNGSVVPKFKAQIEAGGPVTVTHPDMVRYF
                     MDIREACDLVVTAASHALAPQRSDVSVYVLNMGQPVKIVDLAERMIRLYGLEPDKDVE
                     IAFTGIRPGERLNEILFAADEPSADIGIAGIVAARPVSPSLDTLRAWLAALEQGLRRN
                     DREAIYRALQDAVPGFRKEAV"
BASE COUNT          327 a          528 c          537 g          348 t
ORIGIN      
        1 acccgcatgg tgggacggaa ctacggtctc ggcggcatcg cgctggtgtg gcaaatcctg
       61 ctgccggcag catttccttc gatcctggcg ggactgaaga tcggctgggc gtttgcgtgg
      121 cgcaccctca tcgcggccga gctggtgttc gggacgagtt ccggctcaag cggcttgggg
      181 cggtatatct acgagaacaa gaaccagctg gagattccca atgtttttgc cggtctgctc
      241 accgtgatcc tgatcggcct cgcagtcgag aacctgatct tccgcgtggt cgagaaccgc
      301 accgtgcgcc gttggggtat gcagacgtga agacttccat ctaatatccg acgccgagca
      361 ttagtggcag tgagcgtgcc gcgcgaaccg gagacgccat tgcgatctgg atcgagggcg
      421 cgatagcggg cgctgccgca atcgaggtgg cggtggtttg ctggtgcttg agaagtggaa
      481 ggagcctttc caatctggct tcggtaccgc ggcacccttt aaggtccaca accacttgtt
      541 cgccgggatt gtacggatcg tccaggatga atacgcgggc ctgtgcgctg ctggccgcca
      601 tgaaccaaat cgcaaccact gcgccggcca cccaattcct accattcatc atacggacca
      661 tttgtctgcc cctttgggca gcccggcacc aaagccgaca tacccgtggt gttgatcact
      721 catggagtag tcgcagaggc catcctgaaa gttcaacggc tgcattcgtc ggtattgtgg
      781 gacagctatt tgatatccgg cgcaatttcc ggtgcacgcg accacctttc gtgtccgctc
      841 agcccttaca cggcctcctt gcggaacccc ggcacagcgt cctgcagcgc ccggtagatc
      901 gcttcgcggt cattgcgccg caggccctgt tcgagtgccg caagccacgc ccgcaaggta
      961 tcgagcgacg gactgaccgg acgtgccgcc acgatgccgg caatgccgat gtcggccgag
     1021 ggttcgtccg cggcgaataa aatctcgttt aggcgctcac ccgggcggat gccggtgaac
     1081 gcgatctcaa cgtccttgtc aggttcgagc ccgtagagac ggatcatgcg ctcggcaagg
     1141 tcgacaatct taacgggctg gcccatgttg agcacataaa ccgaaacatc cgagcgttgc
     1201 ggcgccaacg cgtgggaggc ggccgtcacc acaaggtcgc aggcctcccg gatatccatg
     1261 aagtaccgca ccatatcggg gtgggtgact gttacgggac caccggcttc gatctgggcc
     1321 ttgaatttcg gcaccaccga gccgttggag gcgagtacat tgccgaaccg caccgcgatg
     1381 agacgcatcg gcggtcggtc cacggcgcgc gccgcgaaat cggcgtcgag cgcctgacaa
     1441 tacatttcgg cgaaccgctt ggtggcgccc agcatcgaga tcggctcaat tgccttgtcg
     1501 gtcgatatca tcaccatgcc ggccgcgccg gcggcggccg cggcatcggc cacgttgatc
     1561 gagccgaaca cattggtctt gacaccctca tcccaatcgc gctccagcaa cggtacgtgt
     1621 ttgagggcgg cggcatgaaa taagatgtcg ggcttgaatg tcttgacaag gtggataacg
     1681 cgctcacgat cgcgaatatc cgcgatgcgg ccgtcgactt tggtcttcgc gttcttggtg
//
LOCUS       DATILV010000385         5520 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1113074, whole genome shotgun sequence.
ACCESSION   DATILV010000385 DATILV010000000
VERSION     DATILV010000385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5520
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1113074"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(59..946)
                     /locus_tag="VLJ17_08830"
     CDS             complement(59..946)
                     /locus_tag="VLJ17_08830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23118.1"
                     /translation="MLYRGFTYPLLILSALVGAALMAPPAQAQAPRPGQLAPGPGQIP
                     PPGQRGQPPQAQPPGPRGQPPQQQAQQPAPPKPYKPIAVTPAQPYNDPSFVAFRKQLG
                     DIANRKDRAALARIVVNNFFWMGEKGDKANKKKSGIDNLAAAIDLDAKDGSGWQTLIE
                     AANEATLEPVPERKGIMCAPANPTFDEAAADQVAKDTGTTPLEWGYASKPDVEVHAAA
                     QASSPVTEKLGQTLVRVMPEQPAAGAQDQGSPFVRVVTPSGKVGFVLEELVSSLDNDQ
                     ICYVKDATGWKIAGYAGND"
     gene            complement(1062..2219)
                     /locus_tag="VLJ17_08835"
     CDS             complement(1062..2219)
                     /locus_tag="VLJ17_08835"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV23119.1"
                     /translation="MNGLISRVVCGLLLAGLTITTTPGRAEPPKLPVPAVDQSAVGQR
                     GYFYVGGKYVGEPGKEIMQGQIYVEVLAPKDVRRPYPLVLIHGAAQTATNWMGTPDGR
                     KGWAEYFDEQGYIVYMIDQPMRGRSAPHPGDGPTRMFTAQNEEFQFTAIATAGTWPQA
                     KLHTQWPGDGPGKGKKGDPYFDAFYATQVETVTNVEETQRRNQDAGAALLDRIGPAIV
                     LTHSQSGTYGWLIADARPRLVKAVVAIEPSGPPFEGAIIASGKARIWGPTDIPITYDP
                     PVKDPSELAVEREAEADGPDLFVCWMQKAPARQLVTLKNIPVMVMAAEASYHQVYDHC
                     TVKYLNQAGVKAEYIRLQDKGIRGNGHMVMIEKNNLDIARVVDEWVVKNVK"
     gene            complement(2490..2732)
                     /locus_tag="VLJ17_08840"
     CDS             complement(2490..2732)
                     /locus_tag="VLJ17_08840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23120.1"
                     /translation="MATGVLDASWVKASAMAAALYLTSGLAAAASLSRGVRNLLMAFE
                     GTRLWAVGPRDALNGPAAEFAPGVEADCAGREDDHR"
     gene            2833..4110
                     /locus_tag="VLJ17_08845"
     CDS             2833..4110
                     /locus_tag="VLJ17_08845"
                     /inference="COORDINATES: protein motif:HMM:NF002674.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tm-1-like ATP-binding domain-containing protein"
                     /protein_id="HSV23121.1"
                     /translation="MSTSKPTIAVLATLNTKDKEARFVAEVLARAGVRPWIVDLSLKS
                     HEVDGADMAGAGVAAAAGASWQALSERSRKDAAVVMAEGGKKLLLDGFINGEISGVIG
                     LGGANGTNLVCSIMRALPYLLPKVMVSTVAGTAAAQWYVAESDIAMYPSIGDIALNRI
                     TRSVMENAALAVAAAARSWIAKRGATTEHVPLVAVSSFGGTAACADRVSERLEDLGYE
                     VIQFHASGVGGRSLERLAALGELAGVVDVTTHELTDLIVDGVYSAGDTRLTGAGAAGL
                     PQVVIPGAIDHANLWVGQVPERYKAREFFQYNVQNLLMRTNAEEFQKLGREFAARINI
                     AKGPVRVLVPLEGFSEHTKRRAHDLQGNDMGPWKHPEDYRIFVETLRSHLRSVRVDEL
                     ALHVNDAAFADACVDAFVEIGQDVMRQHAERLR"
     gene            4107..>5520
                     /locus_tag="VLJ17_08850"
     CDS             4107..>5520
                     /locus_tag="VLJ17_08850"
                     /inference="COORDINATES: protein motif:HMM:NF013086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSV23122.1"
                     /translation="MTTPSKLGHLDIPVANHQTDVLIIGGGAAGTMAAFACAEAGVAV
                     IQATKGRAASGTTTVARGGFAAAMGEDDSPELHLQDILKHGGELINPELARVWVYDIV
                     ELVRDLESWGAEFVRGADGRLDLKSFPSHSRNRACHHYDTTGNMITKVLSRKLRTDAR
                     IAKHSITAIVDLIVREGRVVGAWGVDYRNGILVVYHAQQVILCTGGGSGLFYVNDNPP
                     QVTGDGYVLGFRAGVPLLGIEMIDFQAMCCSPKELFGFAPHPTGFINAGAVFRNQEGE
                     EFLKRYFPDTAEQSTRSEVILAMAKEIHAGRATSTGGIFMDATKVPMAAIEKQIPHVY
                     KTCLHRGIDITKTPLEVAPGSHTWLGGLKIDVDGKTPVAGLFAAGETAGGIHGGNRIG
                     GSALSASLVYGRRAGRKAAALAREARVDLPRPNVDAIPESERAWLADLMQRNSGALQS
                     DVRMNCCMLAHNKLGPIREER"
BASE COUNT          986 a         1666 c         1780 g         1088 t
ORIGIN      
        1 aatagtattt tgccgggcta caatcagagc ccggccacct tgcgacgggc gtgggcactc
       61 aatcgttgcc ggcgtagccg gcgatcttcc agccggtcgc gtccttgacg tagcagatct
      121 gatcgttgtc cagcgacgac acgagctcct caagcacgaa gccgaccttg ccggacggcg
      181 tcacaacacg gacgaaaggt gatccctggt cctgcgcgcc ggccgcgggc tgttccggca
      241 tgacacggac aagagtttgg ccgagcttct cggtgacggg cgaactggcc tgcgcggcag
      301 cgtgcacctc gacgtcaggc ttgctcgcgt agccccattc gaggggggtg gtgccggtgt
      361 ctttggcaac ctgatcggcg gccgcttcgt cgaaggtcgg atttgccggg gcgcacatga
      421 ttcccttacg ctccggcact ggttcgagag tcgcctcgtt ggcggcctca atcagggtct
      481 gccagccaga gccatccttg gcgtcgagat cgatcgcggc cgccaaattg tcaatgccgg
      541 actttttctt gttggctttg tcgccctttt cccccatcca gaaaaagttg ttgacgacga
      601 tccgggcgag cgcagcgcgg tctttgcgat tggcgatgtc accgagttgc ttacggaacg
      661 ccacgaagct cggatcgttg taaggctgcg ctggcgtcac tgcgatcggc ttgtagggct
      721 tgggcggggc tggttgctgg gcctgctgtt gcgggggttg tccgcgcggt ccgggcggct
      781 gcgcctgcgg gggctgccca cgctgaccgg gaggcggaat ctgtccgggg ccgggcgcaa
      841 gctgtccggg tcgcggtgcc tgagcttgcg ccggcggcgc catcagcgca gcgccaacga
      901 gggccgatag tatcaacaaa ggataggtga aaccgcgata gagcatcgga gtggctccgg
      961 gttggtggcg aggtccccca atatacgcat tgtgcagggc gggctgcaat tgcgacggtc
     1021 gctgttgtcc aacacgggcc tcatccagaa tcatcggtgc cttatttgac gttcttcacc
     1081 acccattcgt cgaccacgcg ggcgatgtcg agattattct tctcgatcat caccatgtgg
     1141 ccgttgccgc ggatgccctt gtcctgcagg cgaatatatt cggccttgac gccggcttgg
     1201 ttgaggtact tcacggtgca gtgatcatag acctggtgat aggaggcttc ggccgccatc
     1261 accatgacgg gaatgttctt gagggtgaca agctggcgcg ccggcgcctt ctgcatccaa
     1321 catacgaata ggtctggacc gtccgcctcg gcttcacgct cgaccgcaag ctcgcttggg
     1381 tctttcaccg gcggatcata ggtgatcggg atatcagtcg gtccccaaat tcgcgccttg
     1441 ccgctggcga tgatggcgcc ttcgaacgga gggccggacg gctcaatggc gaccaccgct
     1501 ttgacgaggc gtgggcgtgc atcggcgatc agccagccgt atgtgcccga ttgagaatgg
     1561 gtgagcacga tcgcgggtcc gatgcggtcg agcagggcag cgccggcgtc ctggttgcgc
     1621 cgctgggtct cctcgacgtt ggtcacggtc tcgacctggg tggcatagaa cgcgtcaaaa
     1681 tatggatcgc ccttcttgcc cttgccgggg ccgtcgccgg gccattgggt gtgcagtttg
     1741 gcctgtggcc aagtgcctgc cgtcgcgatg gcggtgaact ggaattcttc gttctgggcg
     1801 gtgaacatgc gggtcggtcc gtcgcccgga tgtggcgccg agcgcccgcg catcggctgg
     1861 tcgatcatgt agacgatgta gccttgctcg tcgaaatact cggcccatcc cttgcgcccg
     1921 tcgggcgtgc ccatccagtt tgtcgcggtc tgcgcagcgc cgtggattag caccaacgga
     1981 taaggccgcc gcacatcctt aggtgccagc acctccacat agatctgacc ctgcatgatt
     2041 tccttgccgg gctcgccgac atatttgccg cccacataga aatagccgcg ctggccgacc
     2101 gcagactggt ccaccgcagg cactggcagc ttgggtggtt cggcccgccc gggagtcgtt
     2161 gtgatggtga gcccggcaag caataagccg cagaccactc gtgaaatgag accgttcatg
     2221 gtttcctccg cgcttcggca gcaaatttcg ctcttcgccg gagcctaccg gtgtcaccgc
     2281 ccgactgagc acgcctcgaa gcttgaccag gcaatcgtgc cttcgcgggc gcgttatgtc
     2341 cagggtagtt cgagtgctct cgcgtttgcg gtcgggtgcg ctgagagccg gcacctaact
     2401 catccgggcg gcgcgccgat ttgggaagtg atctggagag gtctctgccg acctcgaact
     2461 ggagctacac ttcgggctcc tctcgatgtc taacgatgat cgtcttcacg cccggcgcaa
     2521 tccgcctcaa cgccgggggc gaattcagcc gcgggaccgt tcaatgcatc cctcgggcca
     2581 acggcccaca atcgcgtgcc ttcaaaggcc atcaacaggt tgcgcacgcc gcgactcaac
     2641 gatgcggccg ccgcaaggcc ggatgttaga tacagggctg ccgccatcgc cgaagccttg
     2701 acccaactgg cgtccagcac gccggtcgcc atggcgcgcc ggtaattgcg ccattctttt
     2761 atggcagatg aattagccgg cccattcgcc tcagctaggc ctcgtcaagt gcccgcgttt
     2821 cgggaggtct tcttgagtac atcgaaaccg accatagccg tattggcgac cctgaatacc
     2881 aaggacaagg aggcccggtt tgtcgcggag gtgctggcgc gtgcgggtgt aaggccctgg
     2941 atcgtcgact tgtcgttgaa atcacatgag gttgacggtg ccgatatggc gggcgctggt
     3001 gtggccgcgg cggcgggcgc gtcctggcag gcgttgagcg aacgctcacg caaggatgcc
     3061 gccgtagtga tggccgaggg cggaaagaag ctattgctcg atggatttat caacggcgag
     3121 atttccgggg ttatcggact tggtggagcg aacggcacca atctcgtgtg ttcgatcatg
     3181 cgggcactgc cttacctctt gcccaaagtc atggtgagca ctgtagccgg caccgcagcc
     3241 gcgcagtggt atgtggccga aagcgatatc gccatgtatc cgtcgatcgg cgacatcgcg
     3301 ctcaaccgta tcacgaggtc ggtcatggag aacgccgcgt tggcggtggc cgcagcagcc
     3361 aggagttgga ttgcaaaacg gggagcgacc accgaacatg tgccactcgt tgcggtctct
     3421 tcgtttggcg gcactgccgc ctgtgccgat cgcgtgagcg aacgtcttga agacctcggt
     3481 tacgaggtaa tccagttcca tgcctcgggc gtcggcggca gatcgctcga aaggctggcg
     3541 gcattgggcg aactcgcggg cgtcgtcgac gtcacgacgc acgaacttac cgatttgatc
     3601 gtcgatggcg tgtattctgc gggcgacacg cgattgaccg gtgcaggcgc agccggtctg
     3661 ccgcaggtgg tcattccggg cgcgatcgat cacgccaatc tgtgggtcgg ccaggtgcct
     3721 gagcgttaca aggcgcggga attcttccag tacaatgtgc aaaacctcct catgcgcacc
     3781 aatgccgagg aattccagaa actcggccgt gaatttgcag cccggatcaa catagctaaa
     3841 gggcctgtgc gtgtcttggt cccgcttgag ggcttcagcg aacacaccaa gcgccgtgcg
     3901 catgatcttc agggcaacga catgggcccc tggaagcacc ccgaggacta ccgaattttt
     3961 gtggagaccc tcagatcgca cctgaggtca gtgcgggtcg acgaacttgc gctgcacgta
     4021 aacgatgcgg cctttgcgga tgcctgcgtg gacgcgttcg tggaaatcgg ccaggacgtg
     4081 atgcgacagc acgcggaacg cttaagatga ccacaccgag caaacttggc catctcgata
     4141 ttccggtggc gaaccaccaa accgacgtgc tgatcattgg cggaggcgcg gccggcacca
     4201 tggcggcatt cgcgtgcgca gaagccggcg tcgctgtcat tcaagccacc aagggccgcg
     4261 ccgccagcgg cacgaccacc gtggcgcgcg gaggcttcgc cgccgccatg ggcgaggacg
     4321 acagtcccga gcttcacctt caggacatcc tcaagcacgg cggcgaactg atcaatcctg
     4381 aactcgcgcg ggtctgggtc tacgacatag tcgagttggt gcgcgatctg gagtcttggg
     4441 gggcggagtt tgtgcgcggc gctgacggac gcctcgacct caagtctttt cccagccact
     4501 ccagaaatcg ggcctgtcat cactacgaca ccaccggcaa catgatcacc aaggtcctgt
     4561 ccaggaagct gcgcaccgac gcccgcatcg cgaaacactc gattacggcg atcgtggatc
     4621 tcatcgtgcg ggaaggccgc gtcgttggcg cctggggcgt ggactaccgc aacggcatcc
     4681 tcgtcgttta tcatgcgcag caggtcattc tgtgcaccgg tggtggaagc gggctgttct
     4741 acgtcaacga caacccgccg caggtgaccg gcgacggcta cgtgctggga ttccgtgccg
     4801 gtgttccgct gctgggaatt gagatgatcg atttccaagc gatgtgctgc tcgcccaagg
     4861 agttgttcgg ctttgcaccg catcccaccg ggttcatcaa tgcaggcgcg gtgttcagaa
     4921 atcaggaagg cgaagagttt ctcaagcgct atttccccga taccgctgaa cagtcgaccc
     4981 gttctgaagt gatcctcgcc atggccaagg aaatccacgc ggggcgggca acgtctacgg
     5041 gcggcatctt catggacgcc accaaggttc cgatggcggc gatcgagaag cagatcccgc
     5101 atgtttacaa gacgtgcctg caccgcggca tcgacatcac caagacgccg ctggaggtgg
     5161 cgccgggaag ccacacctgg cttggcggtc tcaagatcga cgtcgatggc aagactccgg
     5221 tcgcagggct gttcgcggcc ggcgagaccg ccggcggcat ccacggcggt aaccgcattg
     5281 gcggttcggc gctgtcggct tcgctggtgt acggccgacg cgccggcaga aaggcggcag
     5341 cgctcgccag agaggcgcgt gtcgatttgc cccgccctaa cgttgatgcc atcccggaat
     5401 ccgagcgtgc ttggcttgcg gacctgatgc agcgcaacag cggcgctttg caatccgacg
     5461 tgcggatgaa ctgctgcatg ctggcgcaca acaagcttgg tcccatccgc gaagaacgta
//
LOCUS       DATILV010000386         2970 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3160729, whole genome shotgun sequence.
ACCESSION   DATILV010000386 DATILV010000000
VERSION     DATILV010000386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2970)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2970)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2970
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3160729"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            242..1336
                     /locus_tag="VLJ17_08855"
     CDS             242..1336
                     /locus_tag="VLJ17_08855"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HSV23123.1"
                     /translation="MFAYWGRRGALSQLSLDLARVAATRKEIRCTVSVSKRNEQFNKF
                     RFLRDDLFAIDTCQRRLHAFLYYGYIRNLRDGLKQRLLRDNTRAIVSLMPHVWSPLVA
                     PVIRRAGVRHVAVVHDADAHPGDRYGLINRWLLREAAAADHVITLSEAVAHRLVATRK
                     IPAKKITVLFHPDLSYGARVRPGENEGSPLRVLFLGRMLPYKGLGLFVDAVARLRSDG
                     VRLNVGVVGDGKIDPIIRAKLSALGAEIENRWIRHDEFNGILSRYDVVAASHTAASQS
                     GVIAAAFGAGLPVVATPVGGLVEQVIHNETGLIADAATAPAFAEAIRMLAAYPALVAR
                     LRHGIAARREERSIERFFDDMCDISLRGTC"
     gene            1443..2822
                     /locus_tag="VLJ17_08860"
     CDS             1443..2822
                     /locus_tag="VLJ17_08860"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HSV23124.1"
                     /translation="MKITVHLGGRQPRPIVGPGNLDTPMMGTMSRFDGAISSDYPVRP
                     PRRRPTWGAVMHALVHTLHRHLWQRISYRWRRYALFRATALAAPRPSPNATPALPVIV
                     AGALRSASGLGQSARLCHDALHHSGLDVYGVDLTSALMQPPDLPNFAFADGRAIEGPG
                     ILILHVNSPLIPLAMLHLGRRLVRNKRVIGYWAWELPYVPADWRHGVPFVHEIWAPSA
                     FAAAAIKPIANGHPIHVMPHPVALARETQALQYRNVHDPFTVLTVFNMGSSLARKNPC
                     AAIDAFRRAFRDDPSTRLIVKYLNAGLFPGGVTLLQAACHGASNIVLMGDTLSSSGIE
                     ALYDEADVVISLHHSEGFGLVIAEAMCRGIPVVATNWSGNVDFLNAETGMPVGYGLVP
                     AFDQQHTYDHPDMVWAEADVDAAAAALQELRSNPGLRRRLQASALAVATQLFSPDGYA
                     RRVRQLCHV"
BASE COUNT          558 a          884 c          853 g          675 t
ORIGIN      
        1 cgcttccccc gcgaaattaa ccaaaatact acgcatttcc acgtaatact ttaaacggtg
       61 attcgttacc ggaactggtg ttctcttacc ggtacaaccc atgcaaagta cggccctcgc
      121 ctcgccgttg tcaggcacaa attatcgcct cgacgcgaat tccatggctg gtgagccggc
      181 ttggcgagtt ccggacgtgg cgcgggttga caccacgttg ggtgtgtccg accgacccgt
      241 aatgttcgcc tactggggga ggcgaggcgc actttcgcaa ctcagtttag acctcgcacg
      301 tgtcgccgcg acgcgtaagg aaattcgatg caccgtttcc gtatcgaagc ggaacgaaca
      361 gttcaacaag ttccgctttt tgcgcgatga tctatttgcg atcgatacgt gtcaaaggcg
      421 actgcacgcg tttctgtatt atgggtatat cagaaactta agggatggtt tgaagcagcg
      481 tctcctgcgc gataatactc gtgccatcgt gtctttaatg ccccatgtgt ggtcaccttt
      541 ggttgctccg gtgatacgtc gggctggagt gagacacgtc gccgtggtgc acgatgccga
      601 tgcacatccg ggtgatcgct acgggctgat caatcggtgg ctgctgcgcg aagccgctgc
      661 agccgaccat gtcatcacgc taagcgaggc ggttgcacac cgccttgttg ctactcgtaa
      721 aattccagca aaaaaaatta ccgttctctt tcatcccgac ctgagttacg gcgcccgcgt
      781 taggcccggt gagaacgaag gcagcccgct gcgtgtcctc tttctcggtc gaatgctccc
      841 ttacaagggg ctgggcctct tcgttgacgc cgttgcgcgc ttgcgcagcg acggggtccg
      901 gttgaacgtc ggtgtcgttg gggacggaaa aatcgacccg attatccggg cgaagctttc
      961 cgcgctcggc gccgaaattg aaaatagatg gattcggcac gacgaattca atggcatcct
     1021 ttcgcgttac gatgtcgtgg ccgcatctca cactgcggcg agccaatcag gggtcattgc
     1081 agcagccttc ggcgccggct tgcccgtggt ggcaacgccc gtaggtggtc ttgtcgagca
     1141 ggtgatccac aatgagaccg gccttatcgc ggacgctgct acggctcccg ccttcgccga
     1201 agccattcgg atgctggccg cgtatcctgc acttgtggcg cggcttcggc acgggatagc
     1261 cgcgagacgt gaggagcgtt cgatcgaacg attcttcgac gacatgtgcg acatttctct
     1321 tcgcgggaca tgttagcggt catggcgttg gagctatctg gtcgatcgat gcaccatttc
     1381 ttctcggtga tgcgctgggg cggccgagct gcataaggta gtcttgcatc agaaaaacat
     1441 cgatgaagat cacagtccat ctcggggggc gccaaccgcg tccgatcgtc ggtcccggga
     1501 acctagacac gcccatgatg ggcacgatgt cgcggttcga tggcgcgata tcgtccgact
     1561 atcccgtgcg tcctccgcga cggcgtccta cttggggcgc ggtaatgcat gctctcgtcc
     1621 atacccttca tcgtcatctt tggcagcgta tctcttaccg ctggcgccgc tacgcgctgt
     1681 ttcgagcaac cgcgctggcc gcaccgcgtc cgtcgccgaa tgcgactcca gcgttgccgg
     1741 tcatcgtcgc gggcgcactc cgtagcgcct ccggcctcgg tcaatcggcg cggctgtgcc
     1801 atgacgcact ccaccattca ggcctcgacg tctacggcgt cgacctgacg tcggcgctga
     1861 tgcagccgcc cgatcttcca aattttgcat tcgccgacgg cagagcaatc gaaggccccg
     1921 gcatacttat ccttcacgtc aattcaccgc tgataccgct tgccatgctg catctcggcc
     1981 gccgccttgt acgtaacaag cgtgtcatcg gatactgggc atgggaatta ccgtacgtcc
     2041 ccgcggactg gcggcatggc gtccccttcg tccacgaaat atgggcacca agcgcgtttg
     2101 ctgccgcagc gattaagcca atcgctaatg gacaccctat tcacgtcatg ccgcatcccg
     2161 ttgcactcgc gagagagact caagcgttgc aataccgaaa tgtacacgac ccctttaccg
     2221 tgctcactgt cttcaacatg ggttcgagcc ttgcccgcaa gaatccgtgc gccgcgatcg
     2281 acgctttccg tcgcgccttc cgggacgatc cgtcaacgcg gcttattgtc aaatacctaa
     2341 acgcaggctt gtttccggga ggagttaccc tgttgcaagc agcatgccat ggcgcttcga
     2401 atattgttct gatgggtgat accttaagtt cgtcgggcat tgaggctctt tatgacgagg
     2461 ccgatgttgt catctccctg catcattcag aagggttcgg gcttgtcatc gccgaggcta
     2521 tgtgccgggg gatcccggtt gttgcaacaa attggtctgg caacgtcgat ttcctcaacg
     2581 cggagacagg catgccggtc ggctacgggc tcgtcccggc attcgatcaa caacatacct
     2641 acgaccaccc cgacatggtt tgggccgagg cggatgtcga cgcggccgca gccgcgctgc
     2701 aagagctacg ctccaatcct ggcttgaggc gacgacttca ggccagtgct cttgcagtgg
     2761 caacgcaact ttttagcccc gatggatacg ccagacgcgt tagacagttg tgccatgtct
     2821 gatcggtcgc ataggattgt cccgttcgat attgaatttt gactcgccgt gcgcggtatc
     2881 agttatcgct gccgcggcca cgacgcgggc atcggccgat gcaaagcgct gacacaggcg
     2941 gtcgatgagc gtggtgacgt cggtggcgtt
//
LOCUS       DATILV010000387        10774 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3161161, whole genome shotgun sequence.
ACCESSION   DATILV010000387 DATILV010000000
VERSION     DATILV010000387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10774
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3161161"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..326)
                     /locus_tag="VLJ17_08865"
     CDS             complement(<1..326)
                     /locus_tag="VLJ17_08865"
                     /inference="COORDINATES: protein motif:HMM:NF025014.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein N-terminal
                     domain-containing protein"
                     /protein_id="HSV23125.1"
                     /translation="MGIATQITATLTAAMLGILPARTEEAKSWIRDGEPVRHVIVTIN
                     KSRTFLIDRPFKKLVPGSEEIADVQPLSDRSFYIQGKKIGTTNVLVFDENMQTVRMLD
                     VEVAPDT"
     gene            complement(758..1588)
                     /gene="cpaB"
                     /locus_tag="VLJ17_08870"
     CDS             complement(758..1588)
                     /gene="cpaB"
                     /locus_tag="VLJ17_08870"
                     /inference="COORDINATES: protein motif:HMM:TIGR03177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly protein CpaB"
                     /protein_id="HSV23126.1"
                     /translation="MRSNNMIVLILALAMGSVAAFLARSWVAAHTLTSVEEPVRTTIV
                     VAVTSLGFGSEITSDNVAEIPYAAATLPEGSFATVQDLLKDGRRVVLTPLGRNEPVLR
                     SKVTAPGQRASLSSLLDEGKRAVTVPVDDVRGVAGFILPGDRVDVVLIRNDNAGGNHS
                     YSDVIIQYVKVLAVDQIAGERQEKPTVAKAVTLEVTQEQAQKVLLATNVGKLSLVLRQ
                     PAEEDLHVSRRVTERDLSAVEVAAAAPVAPPTKYADFATVTVVRGAKPEDYSVIRSAR
                     "
     gene            complement(1698..1877)
                     /locus_tag="VLJ17_08875"
     CDS             complement(1698..1877)
                     /locus_tag="VLJ17_08875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013893822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp family type IVb pilin"
                     /protein_id="HSV23127.1"
                     /translation="MTKTKSVLRRLQSDEGGAALVEYTVLLGILLVAVIATIIAVGGW
                     VNDKWTALNAAIANQ"
     gene            complement(1947..2126)
                     /locus_tag="VLJ17_08880"
     CDS             complement(1947..2126)
                     /locus_tag="VLJ17_08880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015929207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp family type IVb pilin"
                     /protein_id="HSV23128.1"
                     /translation="MSKAFMAVRSLMKDEDGAALVEYTVLLGIMLVAVIATIVAVGTW
                     VNGKWTALNTALAGH"
     gene            complement(2557..4065)
                     /locus_tag="VLJ17_08885"
     CDS             complement(2557..4065)
                     /locus_tag="VLJ17_08885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23129.1"
                     /translation="MNVATRIAPIVSFRDTRRVAAFLTLLLACFFLILLCGLRTSDYF
                     LRDPDTYWHIAVAQQIWQTGSFPRVDELSFTFQGRPWIAKEWLSQLILFGAYSLDGWR
                     GVVLITAVTVAATYALLFWILSHKMRLTVAAGVATAAYMISIGHFVARPQIFADPLII
                     IWCAALVDAAQAKAPPPAWLLAIMALWANIHGSFTFGLLLVAALGAEATWATGHGHRL
                     RTAARWALFLFGAMAFACLTPYGYRSLLVTYQLFGGANEAIRHITEWRPVTLDVLGFN
                     EGLIFALLFLSLYFGVRVGFWRLLTILGVAYLMLAHIRFTSLFGMLTPLLLATPLTDQ
                     YPFLRLSSQLRSDPRFFITVLGAARTLRYPISVALISGVVLFAAYGPAMLPRKAITPQ
                     GAIDYIRARQLSGNIYNFYDFGGYLIFSGIKTFIDGRSDQLFQNGFMSRLYDIVEHHP
                     SQFGQLLDEYNISLALVAPDSAESHELARLTGWSRAYVDDVSELYQKMPAHD"
     gene            complement(4197..4883)
                     /locus_tag="VLJ17_08890"
     CDS             complement(4197..4883)
                     /locus_tag="VLJ17_08890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007593418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSV23130.1"
                     /translation="MTAFDQYASNYQETVQNAVDFAGLDYGFFVRAKATCLKAMAAAR
                     FGRSARPSLLDVGCGVGTLHPLVTDSFGEIYGVDQSAESIEQARRRNPGGRYDVSTGP
                     ALPYRSGRFDLVAAICVVHHVPPADWSMFVAELKRVTRPGGLVCLIEHNPFNPLTRLA
                     VLRCPFDEEAHLLSACRARSLLREAGLRPVGSEHFLLLPSAAPRLLAVERWLGRLPLG
                     AQYVAWGERS"
     gene            complement(4999..6000)
                     /locus_tag="VLJ17_08895"
     CDS             complement(4999..6000)
                     /locus_tag="VLJ17_08895"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020179211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSV23131.1"
                     /translation="MTNGSIVYSLIIPFFDEASVMPKLLCRLDAVLDRLDGLAEVIFV
                     DDGSRDDGASIVAEKARDDQRYRLISLSRNFGHQVAITAGMDIACGQAVIVMDADLQD
                     PPELVLDMIAKWKAGYEIVYAERLSRDGEGLFKRITANAFYRMLRHLASVDIPRNVGD
                     FRLVDRKALEVFRRMRERDRFVRGMYSWMGFRQTSVTFHRPGRASGSTKYSLSKMIAL
                     SLNGVIGFSDTPLRLALWLGFFISAIAGIMCLYVVAVALYDHTLVPGWASTMVLVSFL
                     SGVNLLMTGVVGLYVGRVHTEVKNRPLYVINRTVGFEGERTLETGARSLFVPSAARF"
     gene            complement(6413..7189)
                     /locus_tag="VLJ17_08900"
     CDS             complement(6413..7189)
                     /locus_tag="VLJ17_08900"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV23132.1"
                     /translation="MPAIILSGDVRAEKRRKIAESGYVDVIKPVNASELAQLVQQLLA
                     GPPFAAAKSTAAPPAGAATAVVATTIFVVEDDEDARDAMRILLTNAGYVIKAYARAQT
                     FLDSRRPGDRCCLITDVRKPGMNGLEMLARLATAGSTLPAIVITGQGDIEMAVQAMRA
                     GAADFIEKPVDAEALLTSVRRALEHAADPAQRLAAAAAAAMRIAGLTKREREVMALVV
                     AGHANKAIAARLDVNQRTVETHRAAVMTKLACDLFPTWSA"
     gene            7990..8169
                     /locus_tag="VLJ17_08905"
     CDS             7990..8169
                     /locus_tag="VLJ17_08905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23133.1"
                     /translation="MNAKPSIDSELGGVDTTVAQIQLENAKRELDQTTIRAPSNGYVI
                     VSLTVGDRAPCKLGR"
     gene            8653..8805
                     /locus_tag="VLJ17_08910"
     CDS             8653..8805
                     /locus_tag="VLJ17_08910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23134.1"
                     /translation="MLDFTNTRAFGLAFIGAFAMAICYADGMGDWRIIGLPVMGMLAY
                     RIFFQE"
     gene            9285..9722
                     /locus_tag="VLJ17_08915"
     CDS             9285..9722
                     /locus_tag="VLJ17_08915"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV23135.1"
                     /translation="MPDVLCVEGDDAVRTLAESVLQTNGYATLSAATIDQATALIESE
                     KKIDVLFIEIGLGDEVEAGLKLAQDARKQRPNLAVLYTSAQALTDGLTELFVENSFFL
                     SKPYTGDQLITSLLVHFGLRGRDDSSIAGPILPTLPPHSQDHF"
     gene            10078..>10774
                     /locus_tag="VLJ17_08920"
     CDS             10078..>10774
                     /locus_tag="VLJ17_08920"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018070860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSV23136.1"
                     /translation="MSPSFRLDADWQSDLQVLWEDGERVFHRGWRLGNDDNRSAVLVV
                     LPAAEHPSPSSLGRLTHEYGLKDELDGPWAVRPLDLVREGGRTVLVLEDAGGEPLDRV
                     LGAPIEVGRFLRLAVGIAMALGKLHQRGLVHKDIKPANIFLNDATGEVRLTGFGIASR
                     LSRERQAAKPPEALTGTLAYMAPEQTGRMNRSVDSRSDLYALGVTFYQMLTGALPFSA
                     ADPTEWVHCHLAKQ"
BASE COUNT         2291 a         3196 c         3151 g         2136 t
ORIGIN      
        1 gtgtccgggg cgacctcgac gtcaagcatg cgtacggtct gcatgttctc atcgaacacc
       61 aaaacgttgg tggtaccgat cttcttgccc tggatgtaga acgagcggtc gctcagcggc
      121 tgaacatccg cgatctcttc cgagcccggc accagctttt taaacggacg gtcgatcaga
      181 aaggtccggg atttgttgat cgtgacgatg acgtgccgta ccggctcacc atcgcgtatc
      241 catgacttgg cttcctcggt ccttgcgggg agaatgccga gcatcgcggc ggtcagcgtc
      301 gcggtgatct gcgtagcaat tcccacaagc cgacctgacc ctgatgcgta tctgttggta
      361 tccggtcgtg atcgttgcat ccgctctgtc ccctcaagtt cgcagccgta gtacctccgc
      421 gcggcggatt ttgattcttg acttggttcg acggtagcgg ggggtggtct ttccaagttc
      481 ggtctcaatc agtcaaattc actgcgccga gaaacctcgg ctatcagctt gcgcggtttc
      541 ctgccataga cgggaagtat taatacggtg tattccacat acttggtcga ggcattttct
      601 ggcggcgtga gcaactcgat gcgacgccgc gtatgtagtt ttctcaatgt gcttcgaggc
      661 ttggacgcgc cgggcggatt tgtgactgtc ctcgcccatt acttgatgag cttcgctgca
      721 ctgaacgcat cgagtcgtga cgccttgcga gacgagtcta gcgggcgctg cgaatcaccg
      781 aatagtcctc cggctttgcc ccgcggacaa ccgtaacggt cgcgaagtca gcgtacttgg
      841 tcggtggagc gacgggtgcc gcagcggcaa cctcgaccgc cgacaggtcg cgttctgtca
      901 cccgtcggct tacgtgcagg tcttcttcgg cgggctgtct aagaacgagc gaaagcttgc
      961 cgacgttggt ggccaacaga accttctgag cctgctcctg cgtgacttcg agcgtcacag
     1021 ccttggcgac ggtcggcttc tcctggcgct cgcccgcgat ttggtcgacg gcaagcacct
     1081 tcacatactg gatgatcacg tccgaataac tatggttgcc tcctgcgtta tcattgcgga
     1141 tgagaacgac gtcgacgcga tcgcccggca ggatgaaacc cgcgacaccg cggacatcgt
     1201 caaccggtac cgtcactgcc cgcttgcctt catcaagcag ggaggacagc gaagcgcgct
     1261 gccccggagc cgtgaccttg gagcgcagca ccggttcgtt tcgcccaagc ggcgtgagca
     1321 ccacccgacg tccgtccttg agcagatcct gtacggtcgc aaacgagcct tcgggcaacg
     1381 tcgcagccgc gtacgggatt tcggcaacat tgtcgctcgt gatctcgctg ccaaaaccca
     1441 agctcgtgac cgcgaccaca atggtggtgc ggaccggctc ctcgaccgag gtcaaggtat
     1501 gagccgcgac ccagctgcgg gcaagaaagg ccgcaacact gcccatcgcc agtgcaagga
     1561 tcagaacgat catattgttg ctacgcatgc tcgtagacgc cctctagtaa gaccacagtt
     1621 gcacgatgcc cgatccgggc gactgtcgcg ccggaaaccc gcatagcagg cggccgggtc
     1681 ggccgcctgc tactgtctca ttggttcgca atggccgcat tcagggcagt ccacttgtcg
     1741 ttgacccagc cgcctaccgc aatgatcgtg gcgatgacgg caaccagcag gatacccagc
     1801 aggaccgtgt actcgactag agctgcgcca ccttcgtcag actgcaaccg acggagaacg
     1861 cttttagtct tcgtcattgg ctgttcctgt tgtttgattg ggacctgaaa cgccgtcaca
     1921 gctgagcgca acggcgttga gtcggatcaa tggccggcta gagccgtatt gagcgcggtc
     1981 cacttgccgt tgacccaggt gccgacggcg acgatcgtgg cgatcaccgc gaccagcata
     2041 atgcccaaca gcaccgtgta ctcgaccaac gccgcgccgt cctcgtcctt catgaggctg
     2101 cgcactgcca taaacgcctt gctcatactt actttctcca agtttgccgc ccggacgcca
     2161 gcccgtgcga ttgactccga tgatccgaga tcagcgcccc gacatcgttg gataacgatc
     2221 cgttaatcca aagctttggt caactaaatc gatatatatc tcttcttaat cattaataat
     2281 gcgaatttta cattttgtac tgtaaatgca aatgtacaat tattattcat atcgtttact
     2341 attaaaatca gctgttgctc gccaaaaatt caaaacacgg atgttaaaac tgccaccaca
     2401 aggcgtatta ctaaggaatg cgtcgacggt ttggagctgg gctcgcggca gtacgtcgat
     2461 tatgaccaac gtgccggcag gcatccgtcc gactgcgcag gtctcaatcc ccctcaacag
     2521 gcggctgaag cctgcgcgga tcgcggccaa gtgccctcag tcatgcgccg gcatcttctg
     2581 atacagctcg gatacgtcat cgacataggc tcttgaccat ccggtgagcc tcgcaagttc
     2641 atgtgactcc gccgaatccg gcgctaccag ggccagcgaa atattgtact cgtcgagcaa
     2701 ttggccgaat tgacttgggt ggtgctcgac gatgtcgtaa aggcgagaca taaatccgtt
     2761 ctggaacagc tgatcgctgc gaccgtcaat gaaggtcttg atgccgctga agattaagta
     2821 tccgccgaag tcatagaaat tataaatatt cccgctcagt tgccgagccc gaatatagtc
     2881 gatcgcgccc tgtggcgtaa tggctttcct tggcagcatg gcaggcccat aagcggcgaa
     2941 caacacaact ccgctgatca gcgccacgct gatcggataa cgcagcgtgc gcgctgcgcc
     3001 gaggacagtt atgaagaatc tcgggtccga gcgcagctga gaggagagcc gcaggaacgg
     3061 atattgatca gtcagcggcg tcgccagcag caacggagtg agcatgccaa acaatgaggt
     3121 aaaccggatg tgggccagca tcagataagc aaccccgagg attgtcagca gccgccagaa
     3181 tcccactctg accccaaaat acagactgag gaacagcaac gcgaagataa ggccctcatt
     3241 gaaacccaag acatccaacg tgacgggccg ccattcggta atgtgtctga tcgcctcgtt
     3301 cgcgccgccg aatagctggt aagtaacgag cagggatcgg tagccgtagg gagtaaggca
     3361 cgcaaacgcc atggccccga acaggaacag cgcccagcgg gccgccgttc gcaggcgatg
     3421 gccatgaccg gttgcccacg tggcttcagc cccgagcgcc gcgaccagta gcagtccgaa
     3481 cgtgaagctg ccgtgaatgt tggcccacag ggccatgatc gccagcagcc aggcaggcgg
     3541 cggcgctttg gcttgcgcag catccacgag tgccgcacac caaataatga tgagagggtc
     3601 cgcgaagatc tgcgggcgcg cgacaaagtg tccgatcgag atcatgtacg cggcggtcgc
     3661 aacgccggca gccaccgtca gccgcatctt gtgcgagagg atccagaaca gcaacgcata
     3721 ggtcgccgcg acggtgacgg cggtgatcag gacgacgccg cgccagccgt cgaggctgta
     3781 ggcgccgaac aggatcagct gcgacagcca ctccttggcg atccagggcc gcccctgaaa
     3841 ggtgaatgac agttcgtcga cgcgtgggaa tgagccggtt tgccagatct gctgcgcgac
     3901 ggcaatgtgc caataggtgt cgggatcccg caggaaatag tcgctcgtgc gcaagccgca
     3961 gagcaggatc agaaagaagc acgccagcaa cagcgtaagg aacgcggcga cccggcgggt
     4021 gtcgcgaaaa gacacaatgg gcgcaattct ggtggcgacg ttcatgggac cgatgctccg
     4081 gctacggcgc acttaccaaa agtggacact gacttcgcat cccgaaagcg ccctaaactt
     4141 tatgtctggc gtgctgttct gatggcctac gcggcctgaa agcctgtgca accgcctcaa
     4201 ctgcgctcgc cccatgccac atattgcgcg cccaggggca aacggccgag ccatcgctcg
     4261 acggcgagca ggcgcggtgc ggcgctgggc agcaacagga agtgctcgga tccgactggc
     4321 ctcagcccgg cctcacgcag cagactccgc gcccggcagg cgcttagcaa gtgcgcctcc
     4381 tcgtcgaacg gacatcgtag gacagcaagc cgcgtcaacg gattaaatgg attgtgttcg
     4441 atcaggcaga cgagccctcc agggcgggtc acgcgtttca attccgcgac gaacatcgac
     4501 caatccgccg gagggacatg gtgtacgacg cagatcgcgg cgacgaggtc gaagcgaccg
     4561 gaccgatacg gcagagccgg cccggtgctg acgtcgtacc gccccccggg attccggcgt
     4621 ctcgcctgct cgatcgattc ggcggactgg tccactccat aaatttctcc aaagctgtcc
     4681 gtcacaagcg ggtggagggt gccgacaccg cagccgacat cgagcagact gggtcttgcg
     4741 gagcggccga accgagcggc ggccatcgcc ttaagacaag tggctttagc ccgcacgaaa
     4801 aacccgtaat caaggcccgc gaaatccacc gcgttctgga ccgtttcctg gtaattcgac
     4861 gcatattggt cgaaggctgt cacgtcgcga tcccctgcat caaagcgcat ttgcgttgag
     4921 gtcgactgcc tacgcacatg taccaacgga atgggcttct cgctgctctt ggcatctcgg
     4981 aaaatcgcag gaaatgcttt aaaaccgcgc ggcggacggg acgaaaagtg acctcgcgcc
     5041 ggtctccaat gttcgctctc cttcgaatcc aacagtgcga ttgatgacgt agagcggccg
     5101 gttcttgacc tctgtatgga cgcgccccac gtacagtcca acgacgccgg tcatcagcaa
     5161 gttgacgcct gagagaaacg agacgagcac catggtcgag gcccaccccg gaaccaaggt
     5221 gtggtcgtag agggcgaccg ccacgacgta gagacacatg attccggcga tcgccgagat
     5281 gaagaatccc agccatagcg ctaggcgcaa cggagtgtcg gaaaagccga tcacaccatt
     5341 gagcgacaac gcgatcatct tgctcaggga gtattttgta ctgccagacg ctcggcccgg
     5401 tcgatggaat gtgacggagg tctggcggaa tcccatccaa gaatacatgc cccgtacaaa
     5461 gcggtcgcgc tcccgcatgc ggcggaacac ctcaagtgcc ttgcgatcaa ccagtcgaaa
     5521 atcgccgaca ttgcggggaa tatccactga ggccaggtgg cgcagcatcc ggtagaacgc
     5581 gttcgcggta atacgcttga atagcccctc gccgtcgcgc gacaggcgct ccgcgtagac
     5641 aatctcatat ccggccttcc actttgcaat catgtcgagc accagctcgg gcggatcctg
     5701 caggtcggca tccatgacga tgaccgcctg tccgcacgcg atatccattc cggcggtgat
     5761 cgccacctga tgcccaaagt tgcgcgacaa agagatcaga cgatatcgtt ggtcatctct
     5821 cgccttctcg gccacgatgg aggcgccgtc atctcggctg ccgtcatcga caaatatcac
     5881 ttcggcgagc ccgtccaatc ggtcgagcac cgcgtcgagg cgacataaca gcttgggcat
     5941 caccgaagcc tcgtcaaaga acggaatgat gaggctatag acgatcgaac cgttagtcat
     6001 ggtgatgcaa ctgcgttggc ttatgtgatt gttacttgct tcatcagagt ttgtacaacc
     6061 aatcaacgtg ttagtattaa cttgagggca tgcctgaatg tttgcagaag tccgcgcagc
     6121 ccgacgcgat ctcaaacaaa ggctgcccct ctcgtcgttg atccggcttg gcagtctgcg
     6181 ctgcaggcca ccccgcatgc gatcgttacg actgcctttc cggacataca cggccgggcg
     6241 gggggcctat ctaccgcacg ggctcattcg ccgaagggac aaagaggctc acccgttctc
     6301 ctcgctgctc agcaaatgtg tatttattcg ctgtgcaggt tacaacgtac aaagggacag
     6361 ggtgggccga tgcctcatgc gggaggcacc tcgtttcccc acgcggcaat ggctaagcgg
     6421 accaggtcgg aaagagatcg cacgcgagct ttgtcatgac cgccgcgcgg tgggtttcga
     6481 ccgtgcgctg gttgacgtca agccgcgcag cgatcgcttt gttcgcgtga ccggcgacga
     6541 ctaacgccat cacctcgcgc tcacgcttgg tcaggccggc gatgcgcata gcggctgccg
     6601 cagctgccgc caagcgctgc gccgggtcgg cggcgtgctc caacgcgcgt ctgaccgagg
     6661 tgagtaacgc ttccgcatca accggctttt cgatgaaatc ggctgctccg gcgcgcatcg
     6721 cctggaccgc catctcgata tcgccctgac cggtgatcac gatcgccggc aaagtgctac
     6781 ccgcggtcgc gagtctcgcc agcatttcga gtccattcat gccgggcttg cggacatcgg
     6841 tgatgaggca gcaccggtcc ccgggacgac gggaatcgag gaatgtctgg gccctggcgt
     6901 aggccttgat cacgtagccc gcgttggtca gcaggatccg catcgcgtcg cgcgcatcct
     6961 catcgtcttc gaccacgaag attgtcgtgg ctacgacggc agtagcggca ccggcgggtg
     7021 gcgcggcagt ggattttgct gcagcaaatg gtggaccggc gagaagctgc tgaacaagtt
     7081 gagcgagttc gctcgcatta accggcttga tgacgtcgac gtagccgctt tccgcgatct
     7141 tgcgccgctt ttcggccctt acatcgccgc tcaagataat cgcgggcact ttccagccga
     7201 gcgccgagcg cagagcgcaa cgccgccgct gtttgcacac cgtcaagttg acccggcaga
     7261 tcgtaatcag aaatcaccac gtccggctgt aggccatctc tggcgacacg atccagcgcc
     7321 acctttccac tggacgccac ggtcaccgct tcaagcgttt cccgcacgga ggcgtcgtct
     7381 tcgatgataa ggagggttcc ggtgcgagtg gcgccaacgc gctgttctac ctgcggcggc
     7441 agcgctttga gctcggttcg cgctggacac gggcacctcg atcgaaaaaa cggaaccttt
     7501 gccgggccag gagcgcaccg cgaccggatg cgtcagcagt tcccccagat gatggacgat
     7561 cgcaaggccg gcatcggcgg cctgctggta ctctgcgaag atgcgaggaa gcttctcctc
     7621 ggaaaagacg aattgcaccg gtctcgagcc gatcgatatc gaggatcgac gtgagtatgc
     7681 ggctcatcgt ttccaggacg cgtcccatcc gatccagcgc cgactgcgac tgatctcgcc
     7741 ggtatgcgcg ccaacttctg caaagaagtc gtgaaaccgc tgacaagctc agcaactcaa
     7801 agccagcttc gcgcaagcct cggcgaacgt cgatggactc gcaaagcagc tcgcctatca
     7861 cacggcagcg ccttgccgac tatgaaaagg ttgcccgaga atgggcttca acagaattca
     7921 agctgcagga tagacaggcc caatacgaga cgattcaatt ttcaattgca ggccgccaag
     7981 gccgcccaat tgaacgcaaa accctccatc gattccgagc tcggcggcgt cgatacaacg
     8041 gtggctcaaa tccaacttga gaatgccaag cgagaactcg accagaccac gattcgtgcg
     8101 ccgagtaacg gctacgtcat cgtttcgctg acggtcggcg atcgcgcgcc ttgcaagctc
     8161 ggtcggtgat gtcgttcatc gttaccgacg agatcacaat agtgggatgt tttcgcctaa
     8221 cagatttcaa acgattaagc ccggagtaac ggtcaagctc gtattcgaca acatccctgg
     8281 ccgcatttac cgcgcgacgt tgccttcccg gagggagtcg gacagggaca gattgccgtc
     8341 tcaggaatgt tggcgagggc cggtactatc tgcggaaggt ctatcccgca caaatctcgg
     8401 atgaacttgg attttgtggc ggccagaccc gagcgaagaa aaaagatccg ttgggtgaga
     8461 ccgccggctt gatccggcaa accaagcgta acgataatac tgtaccccac tatcagttca
     8521 ctgtcataag tcacagttgc gggttccgat cggcacccca gcacctaaaa tgctgaaagg
     8581 gagtgtattt ggataggata gtggggtata gtaggcgacg aagcacctcg gcaccgggca
     8641 tatgtcgcga tcatgctgga ttttaccaat acaagagcct ttgggctggc tttcatcggg
     8701 gcatttgcaa tggcgatctg ttacgccgac ggtatgggcg actggcgcat catcggcctg
     8761 ccggtgatgg gaatgctcgc ctatcgcatc tttttccaag agtagcttta agttggccgt
     8821 tttcaatttc acgagtggct caattcgggt caaaaggggc cagcaccacc agattggctt
     8881 gaaggaacac tatcaatagc atctcggggc aatgcactga aaagtagcta ttttcacgcg
     8941 tagcaaatcc ccttgagcct cctgcctctt ctcgttatgt tgccgtcgcc caaaccgatg
     9001 gcagcgagga gattattgcc agagccacga acgtgttgat tgggcgggct gcttatgaga
     9061 ggccgcacac atgtacccaa acgagctgat cgtctggagc cacggtgcga aaatcatcga
     9121 acgatccact ggaccgttcg gcttgagcgc gacgcacgat catcaggatc gtgctttggg
     9181 cgcaattgat ggcgttgcct tagagacgcc ccatttgcgg tggcttttca ttctggacca
     9241 aaacggcctt ttccgttcac gcgggaaagc ggaggatgtt accagtgcca gatgtgttgt
     9301 gcgttgaggg cgacgacgcg gtccgaacgc tggctgaatc cgttctgcaa acaaacggtt
     9361 atgccacgct atctgcagcc accatcgatc aggcaacggc actcattgag agtgaaaaga
     9421 aaatcgacgt actgtttatc gaaatcggat tgggggacga ggttgaggca ggattgaagt
     9481 tggcccagga tgcacgaaaa caacggccca atctcgctgt cctttatact tcagcccagg
     9541 cgctcaccga tggattgaca gaactcttcg tggagaattc gttttttctg tcgaaacctt
     9601 acaccgggga tcaactcatt acatcgctgt tggtgcactt cggtcttaga gggcgcgacg
     9661 attccagcat tgcaggtccc attctgccaa cgctgccgcc gcattcgcag gatcactttt
     9721 gatctgcaga cgacccgcga acgaggtaga cgtggatgcg tcgatgtcct tggcgagcgg
     9781 tagcttggcg atggtgagcc ggtatttgat cgagcctgct tctcgttgca gacccgaggc
     9841 ctctggctat tgtgagcagc taccgcgaca cgttggatga cgaacaagtt ctcacgcttg
     9901 tcgccccacc aaatcgtggt ggcggataga gtcatcggtt tgggcaagtt tgccacacga
     9961 ggcggtccgg cggggaatca gaattcaaag ctcccgacct tgctttgggt cttgttcacc
    10021 ggcagagtcg caggggacgc gtgcaaagcg tgaccgcggc ggcgcggagt tcggcaagtg
    10081 agcccatcct ttcggcttga tgctgattgg caaagcgatc tccaggtcct gtgggaagac
    10141 ggcgaacgcg tcttccaccg agggtggcgc ctgggcaatg acgacaaccg aagcgccgtg
    10201 ctggttgttc tgcccgccgc ggagcatccc tcgccttcaa gcctcggtcg cctcacccac
    10261 gaatacggat tgaaggatga gctggatggc ccgtgggcgg tgcggccgtt ggacctcgtg
    10321 cgcgagggcg gtcggaccgt gctggtgctt gaggatgcgg gtggcgagcc gctcgaccgg
    10381 gtgctcggcg cgcccatcga ggtgggacgt ttcttgcgcc tggccgttgg tattgccatg
    10441 gctctgggca agctccacca gcgcgggctc gttcacaagg acatcaagcc ggccaacatc
    10501 ttcctaaacg acgcaaccgg cgaggtgcgg ctgaccggtt tcggcatcgc gtcacgcctc
    10561 tcccgcgagc gacaagcggc caagccgccc gaagccctca ccggcactct cgcttacatg
    10621 gcgcctgagc agacaggacg catgaaccgt tcggtcgatt cgcgcagtga cctctacgcg
    10681 ctcggagtca ccttctacca aatgctcacc ggtgctttgc cgtttagcgc cgccgatccc
    10741 acggagtggg tgcactgtca cctcgccaag cagc
//
LOCUS       DATILV010000388         3813 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_601962, whole genome shotgun sequence.
ACCESSION   DATILV010000388 DATILV010000000
VERSION     DATILV010000388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3813)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3813)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3813
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_601962"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            444..2531
                     /locus_tag="VLJ17_08925"
     CDS             444..2531
                     /locus_tag="VLJ17_08925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HSV23137.1"
                     /translation="MTTPNSTSRENRLAHETSPYLLQHKHNPVDWWPWGPEALREAKR
                     LNKPILLSIGYAACHWCHVMAHESFEDGQVAAVMNQLFINIKVDREERPDIDQIYMAA
                     LHHLGEQGGWPLTMFLTSDGEPVWGGTYFPKAARYGRPGFLDVMREIARLFRDEPQRI
                     EQNRAALMTALANKSQPTNQVVIGTAELDSAAIAIARAFDQTNGGLGQAPKFPQCSIL
                     EVLWRAGLRRQEPRFFELIELTLEHMCEGGIYDHLGGGFSRYSVDEKWLVPHFEKMLY
                     DNAQLLELLALAYRRTGRQLFFQRAQETVDWLTREMSTQEGAFCASLDADSEGQEGKF
                     YVWARSEMEDILGPNDAEYFAHYYDVTLDGNFEGKNILNRLKELGRDRGNLGDSGRLA
                     SAEIRLAPLRQKLLTARNKRVRPGLDDKVLADWNGLLIAALANAGVTLNRPDWLALAQ
                     NAFAFIERHMTRGDRLGHSWRAGKLLYPGLASDHAAMIKAALALYEAAGVPEYLGRAF
                     QWQKALDRHYIRKDTGGYYLTADDAEGLVVRPDSTIDEATPNPNGVAAQNLVRLAILT
                     GDKIWRERADILFDGLLPTAAQSMYLHASLINALDLRLRAIEIVALGPQADQFAAVAL
                     AWPFLERVLTRAASPTDLPPAHSGRAILLPDGQSAALVCAGQKCSLPVTEPQQLMAAM
                     AAADGSEIRPLPG"
     gene            complement(2601..3608)
                     /locus_tag="VLJ17_08930"
     CDS             complement(2601..3608)
                     /locus_tag="VLJ17_08930"
                     /inference="COORDINATES: protein motif:HMM:NF015297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HSV23138.1"
                     /translation="MRYLIGISAACAVLCIHATGANAQQNQFPLAAPAGVDSKARQAA
                     PAGAINQGLFDIKTWKYGNAFTPPPGTKIWNPAKIKLMSGGKLVGGTVSSGIDPTTYC
                     AMANAGYDFIWTEMQHANTTWDQAAKAWRTCPNAKAVPGARVPYADEFQIQHALDAGA
                     LVVVVPTVDTVEEAIAARDWTYFPPLGKRSLGGGFAFDPNMWGSVPGGYRNTINDNVV
                     LILMIETLEGLQNADEIAKVAGVHAIFAASSDLGNFAGYKQGDPDYEREINIVHDAAI
                     KAGVKLCGPWAWKDRPDFTCFQAGNEMAAIARGVKIELGEFADTQAKPEVGPFAAARA
                     R"
BASE COUNT          812 a         1136 c         1024 g          841 t
ORIGIN      
        1 agatagtatc atgatgattg aacatattcg atcctacaat caacctcttg aggaattccg
       61 gccaaaggga gaccggcccc tcacctccgt acgggctcgt acatggcggt tcggcgggtg
      121 gctcggtgcg agagaaggcc gagcgcgaag agtgcatcat ttggacacgc gaggctattg
      181 cgggtctttg cggccagttc ctggtcgacg ccttttgagt tctgcgaacc cgcgtttgca
      241 ctcccacttg gtgtgactta agctctcata ctcgcttgcg atggaatccc cttcgtgtgc
      301 tttggcggct catttggagt ttcgtcgatg ggcgagcgcg gcgcagcccg tgccccttgg
      361 aattgtcaaa cttctaatgc ctccccggca cggccggggg aaccttggtt attaggcgct
      421 ggctctgtga cctgcaccat cccatgacaa ctcccaattc aacctcgcgc gaaaatcgtc
      481 tcgctcatga gaccagtccg tatttattgc agcataaaca caatcccgtg gactggtggc
      541 cctgggggcc ggaagcgctt cgcgaggcca aacgccttaa caagccgatc ctgctctcga
      601 tcggatatgc ggcttgtcac tggtgtcacg tcatggccca cgaaagtttt gaagacggac
      661 aggttgccgc tgtcatgaat caattgttca tcaacattaa agtcgatcgc gaggagcggc
      721 ccgacatcga tcagatctac atggcggctc ttcaccatct gggcgagcag ggcggctggc
      781 cactgacgat gtttctcacc tccgacggcg agcccgtttg gggcggcacc tatttcccta
      841 aggccgctcg ctacggtcga ccgggctttc tcgacgtgat gagggaaata gcccgcctgt
      901 ttcgcgatga gccccagcgc atcgaacaaa atcgcgccgc cctcatgacc gcactggcga
      961 acaagtccca gccaaccaat caagttgtca tcggcaccgc tgaattggat tcggccgcca
     1021 tcgccatcgc acgtgcattc gatcaaacga acggcggact tggccaggca ccgaaattcc
     1081 cgcagtgttc catacttgag gtactttggc gcgcaggctt acgccgacag gagccgcgat
     1141 tttttgagct catagaactc accctcgagc acatgtgtga gggcggaatc tacgaccacc
     1201 ttggcggagg cttttctcga tactctgttg atgaaaagtg gctcgttccg catttcgaaa
     1261 aaatgctcta cgacaacgca cagctcctcg aactgcttgc gctcgcttac agacgtaccg
     1321 gaagacagct atttttccaa cgcgcccaag agactgtcga ttggctaacc cgcgagatgt
     1381 cgacgcagga aggtgccttt tgtgcctcgc tcgacgctga ttcggagggc caagaaggta
     1441 aattttacgt ttgggcacgt tccgaaatgg aagatatcct tggaccgaac gacgccgagt
     1501 attttgccca ttattacgac gtaactctgg atggaaattt cgaagggaaa aatatcctaa
     1561 atagactcaa agaattgggc cgcgaccgtg gtaatctggg cgattccggg cgtcttgcga
     1621 gtgccgagat tcgactcgct cccctgcggc aaaaactgct gacagcgcgt aacaagcgcg
     1681 tgcgacccgg cttggacgac aaagtgctcg ccgattggaa cggcttgctg atcgcggccc
     1741 tagcaaatgc gggcgtaact ttgaaccgac cggattggct tgcgctggcc caaaacgcat
     1801 tcgctttcat cgagcgtcac atgacaaggg gtgatcgtct cggtcattca tggcgggccg
     1861 ggaaattgct ttacccgggc cttgcctctg atcatgccgc catgatcaaa gccgccctgg
     1921 cgctatatga ggccgccggc gtgccggaat atctcggtcg cgcctttcaa tggcaaaaag
     1981 ctctcgatcg ccactacatt cgcaaagata caggcggtta ttatctgacg gcggacgatg
     2041 ccgagggttt ggtcgtacgt ccggattcaa cgatcgacga agcaacacca aacccgaatg
     2101 gagtcgctgc acaaaatctc gtacgcctcg caatcttgac gggcgacaaa atttggcgcg
     2161 aacgcgctga cattctattc gatgggctgc tgcctaccgc ggcgcaaagc atgtatctcc
     2221 acgccagcct gatcaatgcg ctcgatctac gtctgcgagc catcgaaatc gttgcgctcg
     2281 gtccgcaagc tgaccaattt gccgctgtcg cattggcgtg gccattcctc gaacgtgtct
     2341 tgacgcgcgc ggcgagcccg accgatctac ctccggcgca ttcggggcga gctattttgc
     2401 tgcctgatgg tcagagcgca gcgttagtct gcgccggcca aaaatgctca ctgccggtga
     2461 ccgagccaca acaactcatg gctgccatgg cagcggccga tggcagcgag attcggccgt
     2521 taccaggcta aggcggagca caaaatccag aacgtcctcg acggggatcg cgcggccgcc
     2581 aagacgcagt gacgctcggc tcatcttgcc cttgcggccg caaacgggcc cacttcaggt
     2641 tttgcctggg tatcggcaaa ttcgccgagt tcgatcttca cgcctcgcgc aatcgctgcc
     2701 atctcattgc ccgcctgaaa gcacgtgaaa tcaggtcgat ccttccacgc ccatggaccg
     2761 cacagcttca ccccggcctt gatggcggca tcgtgaacga tgttgatctc gcgctcgtaa
     2821 tctggatcgc cttgcttata gccagcgaaa ttcccaagat cgctgctggc ggcaaaaata
     2881 gcgtgcaccc ccgccacctt agcgatctcg tcggcgtttt ggagaccctc aagggtctcg
     2941 atcatcagga tcagaaccac gttgtcgttg atggtgttgc gatatccacc tggcacgcta
     3001 ccccacatgt ttggatcgaa cgcgaatccg ccaccgagac tgcgcttccc cagcggggga
     3061 aaataagtcc agtccctcgc cgcaatcgcc tcctctactg tgtctacggt cggaactacc
     3121 accaccagtg caccagcatc gagcgcatgt tgtatctgaa actcgtccgc ataaggcaca
     3181 cgcgcccctg gtaccgcttt ggcatttgga caagttcgcc atgccttcgc ggcctggtcc
     3241 caggttgtgt tggcatgctg catctcggtc cagatgaagt cgtatccagc attcgccatg
     3301 gcacaatacg tggtcggatc aatccccgaa gacaccgtgc cgcccaccaa cttgcccccg
     3361 gacatcaact tgatcttggc cggattccat atttttgtgc ccggtggcgg cgtgaatgca
     3421 ttgccgtact tccaagtctt gatatcaaac aggccttgat tgatggcgcc agcgggcgcc
     3481 gcttgtcgtg ccttactgtc cacaccggca ggcgccgcca acgggaattg attttgctgc
     3541 gcatttgccc cagtggcgtg aatacacaac actgcacatg cggcagatat accaatcaaa
     3601 tatctcatta ccgcgttcct ccgtgatctt tttttgatcc ccggtcgaaa cagccaagct
     3661 gtaagcctgc ctaccgaggc agacgatcct acaacgatcg ctaaaaaggt gggacgaata
     3721 aaagcgcaac tttggggatc gaccaggcct ttggattcgt cagtcattcc ctaggtattc
     3781 atcgactcga agaactccgc attgttcttg gtg
//
LOCUS       DATILV010000389         7479 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_862093, whole genome shotgun sequence.
ACCESSION   DATILV010000389 DATILV010000000
VERSION     DATILV010000389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7479)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7479)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7479
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_862093"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..195
                     /locus_tag="VLJ17_08935"
     CDS             <1..195
                     /locus_tag="VLJ17_08935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23139.1"
                     /translation="ATLAGAGIVARGLWEVEGDTICRRDIRDPADQQRCVSYERLPNG
                     QYRNSDGVQFCLGPCLPPPY"
     gene            309..668
                     /locus_tag="VLJ17_08940"
     CDS             309..668
                     /locus_tag="VLJ17_08940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23140.1"
                     /translation="MRAWIAGILFCAVLPSGTAMAANKLTPAEIQSTFFNGAEFTAAT
                     PSGVMFKMTFTADGKVRRVPVGKGGAKSEGDWKLDENGYCTTWKGGKPNCFTVMAADK
                     NKWSVMKGPAVIATWSR"
     gene            complement(718..1518)
                     /gene="moeB"
                     /locus_tag="VLJ17_08945"
     CDS             complement(718..1518)
                     /gene="moeB"
                     /locus_tag="VLJ17_08945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-synthase adenylyltransferase MoeB"
                     /protein_id="HSV23141.1"
                     /translation="MLNADELERYARHLVLREVGGPGQTALKRARVLVIGAGGLGAPA
                     LLYLAAAGAGTLGVVDDDAVSLSNLQRQVIHATSDVGRPKVDSAMAAVARLNPHVAVE
                     PHGVRLTAKNALDLVLSYDLVVDGSDNFATRYLVSDACYFAKKPLVTAAVGVFDGTLT
                     TIRAHETARDGTPNPTYRCLFPEPPPPGTVPACAEAGILGALTGVIGSMMALEAIREI
                     VGFGEGLVGRLVMLDARAMRFETLSYGWDPNNPLSGADPTIRDLSVHT"
     gene            1712..3046
                     /locus_tag="VLJ17_08950"
     CDS             1712..3046
                     /locus_tag="VLJ17_08950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding domain-containing protein"
                     /protein_id="HSV23142.1"
                     /translation="MQFVSAALILLLGCSVTAIAVAATVTPAANPATRHAAAPAPAKG
                     VYAAMTDAERIAIQSDLIWTGDYNGVAGAEFGDRAIVAVRAYQKRNGGKETGILNPDE
                     RVKLAQAAKSRQEQAGWRIVDDAATGARLGIPQKLAPQAGQAKAGSHWQSVHGELQIE
                     TFRIGAPGTTLAGVFEEQKKEPASRKVEYNVLRSDFFVISGLQGLKKFYVRGQARDNE
                     VRGLTILYDQAMEGTMDRIAIAMSSAFAAFPVRAAVAGPAPRPKAEYGTGFVVSAAGD
                     IVTDGTLLTDCTFIVVPGLGYADRIADDKATALVLLRVNGTRDLVSIALASGRAPGGD
                     VTLIGIADPQAQNGGNAVTTVRGRVVLNGDAVAIDPTPGGGFAGAAALDRDGNMAGMV
                     HPTTAATAPGAQLVPAREIVKFLDAQKVVPATGRAGINGATAAAVRVICVRK"
     gene            complement(3108..3581)
                     /gene="greA"
                     /locus_tag="VLJ17_08955"
     CDS             complement(3108..3581)
                     /gene="greA"
                     /locus_tag="VLJ17_08955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0070063 - RNA polymerase binding [Evidence
                     IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HSV23143.1"
                     /translation="MDKIPMTAAGYSVLENELKHRQQVERPRIIQQITDARSHGDLSE
                     NAEYHAAKEQQSHNEGRIAELEDKLARAEVIDVSKLSGDTVKFGATVTLIDEDTDKKA
                     VWQIVGEPEADAKAGKISIASPLARALVGKKKGANVEVVTPGGAKAYEVVKVEWR"
     gene            complement(3715..7152)
                     /gene="carB"
                     /locus_tag="VLJ17_08960"
     CDS             complement(3715..7152)
                     /gene="carB"
                     /locus_tag="VLJ17_08960"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012317574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HSV23144.1"
                     /translation="MPKRTDLSTILIIGAGPIVIGQACEFDYSGTQACKALKAEGYRI
                     VLVNSNPATIMTDPDVADATYVEPITPEIVARIIEKERPDALLPTMGGQTALNCALSL
                     RRMGVLDKFGVIMIGATAEAIDKAEDRELFREAMQRIGLETPKSSLANASDLKKADRD
                     HHQAEIDRVKTRGLLADDERRAIAAFEGAWAAGEAERKRRYIAKGLIEALEALADIGI
                     PAIIRPSFTLAGTGGGIAFNREEFLDIVERGLDASPTTEVLIEESVLGWKEYEMEVVR
                     DKRDNCIIVCSIENLDPMGVHTGDSITVAPALTLTDKEYQMMRDASIAVLREIGVETG
                     GSNVQFAVNPTDGRLVVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDEIEND
                     ITGGATPASFEPTIDYVVTKVPRFAFEKFPGAEPLLTTSMKSVGEVMAIGRTFQESLQ
                     KALRSLETGLTGLDEINIKGLGEGDDKNAIRAALGAPTPDRILVVAQAMRLGISNETI
                     HDACKIDPWFLAEIRGIVEMETEVKAKGLPATAGALRRLKSMGFSDARLARLAGLAHE
                     EVTRRRHALDVRPVFKRIDTCAAEFASPTAYMYSAYQQPFAGTPADEAAPSDRKKVII
                     LGGGPNRIGQGIEFDYCCCHACFALAEAGFETIMVNCNPETVSTDYDTSDRLYFEPLT
                     EEDVLEIVATERRNGTLLGVVVQFGGQTPLKLAAALERAQVPILGTSPDAIDLAEDRD
                     RFKQLLEKLQIRQPKSGIATSPAAAHAIAEAVGYPIMIRPSYVLGGRAMEIIHDATQL
                     GRYVARLAGDLDRPSELAVSERRPLLIDRYLSDAVEVDVDCIADGRDTYIAGIMEHIE
                     EAGIHSGDSACALPPHSLSPATISELERQTRALSVSLNVVGLMNAQYAIKNGDIYVLE
                     VNPRASRTVPFVAKVIGTPVAKIAARVMTGEPLANFNLKPPAPHHVGVKEAVFPFARF
                     PGVDTVLGPEMRSTGEVMGIDRTFELAFAKSQIGGGARLPRAGTVFVSVRDADKERIL
                     VPVKLLAQLGFKVVATSGTQRYLSANGVHATKINKQLEGRPHIVDAIKNGEIQLVFNT
                     TEGAQALADSRSLRRAALLHKVPYYTTLSGAIAAALGIKAYLGGEFEVRALQSYFAG"
BASE COUNT         1416 a         2281 c         2336 g         1446 t
ORIGIN      
        1 gcaacgctcg ccggcgccgg catcgtggcg cgcggtctct gggaggtcga aggcgatacc
       61 atctgccgac gcgatatccg agatcccgcg gaccaacaac gctgtgtcag ctatgaacgg
      121 ctgccgaacg gccaataccg caacagtgac ggagttcaat tctgcctcgg cccctgcctg
      181 ccgccgccgt attgatgatg ttcggcgatg gctgcggtct cacgccgcaa ccgcgacaaa
      241 ctcgatattt tttccgtgaa agttgcgtat agtgtttgtg ggttccttga ttcatgcagg
      301 ggattgcaat gcgtgcctgg attgcgggta ttctgttctg cgccgtgctg ccgtcaggca
      361 ccgcgatggc cgccaacaag ctcacgccgg ctgaaattca atcgacattc ttcaacggcg
      421 ccgagttcac agcagcgacg ccttccggag tcatgttcaa gatgacgttc acggcggacg
      481 gtaaggtcag acgcgtcccc gtcggcaaag gcggagccaa aagcgagggc gactggaagc
      541 tcgatgaaaa cgggtactgc accacttgga aaggcggcaa gcccaattgc ttcacggtga
      601 tggcagccga caagaacaaa tggtcagtga tgaagggccc ggccgtcatt gcgacctgga
      661 gcagataacc tggagcagat aacctggagc aagtagagtt ggcaaagcca agcctgttca
      721 ggtatgcacc gacaggtctc ggatggtcgg gtcggcacct gacaatggat tgttcgggtc
      781 ccatccataa gacaaggttt cgaaccgcat cgcacgggcg tcgagcatca caagccggcc
      841 cactaaccct tcgccgaagc cgacgatttc gcggatcgcc tccaatgcca tcatggagcc
      901 aatcactccg gtgagcgcgc ccagaatgcc ggcttccgcg caggccggga cggtgcctgg
      961 cggcggcggc tccggaaaca ggcagcgata ggtggggttg ggcgtgccgt cacgcgccgt
     1021 ctcgtgcgcc ctgatggtcg tcagcgttcc gtcgaaaacg ccgacggccg cagttacgag
     1081 tggctttttt gcgaaatagc aggcgtctga aaccagatag cgggtggcaa aattgtcgga
     1141 gccatcaacc accagatcat agctcagcac gaggtcaagg gcattctttg cggtaaggcg
     1201 cacgccgtgc ggctcgacag ccacatgagg attgaggcgt gcaaccgctg ccattgcgct
     1261 gtcgaccttg gggcgtccga cgtcgctggt ggcgtggatg acctgtcgct gcaggttcga
     1321 cagcgacacc gcgtcgtcat cgacgacgcc cagcgtgccg gcgccggccg ccgcgagata
     1381 aagcagggct ggggcgccaa gcccgccggc tccgatcacc agcacacgcg cgcgcttaag
     1441 cgccgtctgg ccggggccgc cgacctcacg caggacaagg tgacgggcat agcgttcgag
     1501 ttcgtcggcg ttcagcatgg ggaattttgt atctggctca gcagcacggt ctgcatcgag
     1561 gcttgtcatt gcggcattca tgttcatcac gcgccagggc cgcgcacggg tcaagcgaaa
     1621 acagcgtggt cgtggtgcgg cgccgacggc ggttgcgcag ccgtctggtt tgactagcat
     1681 cccggattgt ctgccattcg gagggacgat catgcaattc gtgtctgcgg cgctgatctt
     1741 gctgctcggg tgctccgtga cggcgattgc cgtggccgcg actgtgacgc cagcggccaa
     1801 tcccgccacg aggcatgctg ccgcccctgc gcctgccaag ggagtctacg ccgccatgac
     1861 ggatgctgag cgcatcgcca tccaatccga tttaatatgg accggcgatt acaatggcgt
     1921 ggccggcgcg gagttcggcg accgcgccat tgtggccgtg cgggcctatc agaagcgcaa
     1981 cggcggcaag gagactggta tcctcaaccc ggatgagcgc gttaagctcg cccaggctgc
     2041 caaatcgagg caggagcagg ccggctggcg catcgtcgat gatgctgcca ctggtgcccg
     2101 gctcggcatc ccgcaaaaac tggcgccgca ggcagggcaa gcgaaggccg gcagccactg
     2161 gcaatctgtg catggagaac ttcagatcga aacctttcgg atcggggcgc cgggtacgac
     2221 acttgccggg gtgttcgagg aacagaagaa ggaaccggcc agccgcaagg tcgagtacaa
     2281 cgtgctgcgg tcggattttt tcgtcatctc gggcctgcag ggcctgaaga aattctatgt
     2341 gcgcggacag gcgcgagaca acgaggtgcg cggactcacc atcctgtacg atcaggcgat
     2401 ggagggcacc atggatcgaa tcgcgatcgc catgtcgagc gcattcgcgg cgttcccggt
     2461 cagggccgct gtcgctggtc cagcgccccg tcccaaggcc gagtacggca ccggtttcgt
     2521 ggttagcgcc gcgggcgaca tcgtcaccga cggcacgttg ctcaccgact gcaccttcat
     2581 cgtggtgccg ggcctcggtt acgccgaccg aattgccgac gacaaggcaa cggcacttgt
     2641 gctgctgcgt gtcaacggca cccgcgatct cgtttcgatc gctcttgcca gtggacgcgc
     2701 acccggcggc gatgtcaccc tcattggtat cgccgacccg caagctcaga atggcggcaa
     2761 tgcggtgacg accgtgcggg gccgcgtggt gcttaacggg gacgcagtcg ccatcgatcc
     2821 gacgcccgga ggcggtttcg ctggcgccgc ggcgctcgac cgtgacggta acatggccgg
     2881 catggtccat ccgacgacag cggcgaccgc tcctggcgct caattggtcc cggcgcggga
     2941 gatcgtgaaa ttcctcgacg cccagaaggt tgtgcccgcg accggccgcg ccggcatcaa
     3001 cggtgccaca gccgccgccg tccgggtgat ctgcgtacga aagtagcaca acacccgcgg
     3061 gtcgcggatg tctcttggac gttcatagga acgccgtgca tttcaagcta tcgccactcc
     3121 accttcacga cttcatatgc cttggcgccg ccgggggtga cgacctccac gtttgcgccc
     3181 ttcttcttgc ccaccaatgc acgggccagc ggcgaggcta tcgagatttt gccggccttg
     3241 gcatcggctt cgggttcacc aacgatctgc caaaccgcct tcttatcagt gtcttcgtcg
     3301 atcaacgtga cggttgcgcc gaatttgacg gtgtcgcccg acagcttgga aacgtcgatg
     3361 acctctgcgc gcgcaagctt gtcttcgagc tccgcgatgc ggccctcgtt gtgcgattgc
     3421 tgttccttgg cggcgtgata ctcggcgttt tccgatagat caccgtgcga acgtgcgtcg
     3481 gtgatttgct ggatgatgcg cggacgctca acctgctggc ggtgcttgag ttcattttca
     3541 agaacggagt agcccgccgc cgtcatcggt atcttatcca tcgattctct atcccttgac
     3601 aaaaaagcac cgaccgcgtg ctcggctcgt tgcgccggcg acgcgatcca gctcgacttc
     3661 tctgcctacc cgtggccgca ctgtttcggg gcgttgctct cttccaacaa agcttcaacc
     3721 cgcgaaatag ctttgcagcg cccgaacctc aaactcgcct cccagatagg ctttgatgcc
     3781 cagcgccgcc gcaatggccc ccgaaagagt ggtgtagtat ggaactttat gcaagagggc
     3841 tgcgcgtcgc aatgagcggg aatcagcaag tgcctgggct ccctcggtgg tgttgaaaac
     3901 caactgaatc tcgccatttt tgatcgcatc aacaatatgg ggccggcctt ccagttgttt
     3961 gttgatcttt gtggcatgga cgccgttcgc actcaggtac cgctgggttc cggacgttgc
     4021 gaccaccttg aagccaagct gcgccaataa cttgaccgga actagaatgc gttccttatc
     4081 tgcatcgcgc acagacacga acacggtgcc ggcccggggc aatcgagcgc ccccgccgat
     4141 ttggctcttg gcaaaggcaa gttcgaatgt gcggtcgatt cccatcacct cgccggtgga
     4201 gcgcatctcc ggtcccagta cggtgtcgac accagggaag cgcgcaaacg gaaataccgc
     4261 ctcctttacg cccacatgat gcggcgccgg cggcttcaga ttgaagtttg ccagcggctc
     4321 gccggtcatc acccgcgcgg cgatcttggc aactggcgta ccgatcactt tcgccacgaa
     4381 cggcacggtg cgcgacgcgc gcggattgac ttccagcaca tagatgtcgc cgttcttgat
     4441 ggcatattgc gcgttcatca ggccgaccac attgagcgag acagagagcg ctcgcgtctg
     4501 tcgctccagc tccgagatgg tcgccggcga gagcgagtgg ggcggcagcg cgcaagcgga
     4561 atcgccagag tggatgccgg cctcctcgat gtgttccatg atgccggcta tataggtatc
     4621 gcggccgtct gcaatgcaat cgacatcgac ctctacggca tcggaaaggt agcggtcgat
     4681 caatagcggc cgccgctcgg acaccgcgag ctcggacggt cgatcgaggt cgccggcaag
     4741 tcgcgccaca tagcggccga gttgcgtggc atcgtggatg atctccatgg cgcgcccgcc
     4801 cagcacatag gatggccgga tcatgatcgg gtaaccgacc gcctcggcga tcgcgtgcgc
     4861 tgccgctgga ctggtggcga tgccactttt aggttgccgg atctggagtt tttcgagcag
     4921 ctgcttgaag cgatcacgat cttccgcaag gtcaatggcg tctggtgaag tgccgaggat
     4981 cggcacttgc gcgcgttcca acgcggcagc gagcttcagc ggggtctgac cgccgaactg
     5041 cacgacgacg ccgagcaagg tgccgttgcg gcgctcggtg gctacgattt cgagcacatc
     5101 ctcctcggtc agcggctcga aatagagtcg gtccgacgta tcgtagtccg tcgataccgt
     5161 ttcaggattg cagttgacca tgatggtctc gaagccggcc tcggccaacg cgaagcacgc
     5221 atggcaacag caatagtcga attcaatgcc ttgcccgatg cggttcggac cgccgcccag
     5281 aatgatcact ttcttgcggt cggatggcgc cgcctcgtcg gccggtgtgc cagcgaacgg
     5341 ctgttgatag gcggagtaca tgtaagcagt tggcgaggcg aactcggcag cgcaagtgtc
     5401 gatgcgcttg aagaccggac ggacatcgag agcgtggcgc cgccgcgtca cctcctcgtg
     5461 cgccagaccc gcaagccggg caagccgcgc gtcggagaag cccattgact tgaggcgacg
     5521 caaggcgccg gcggtcgcgg gcaggccttt tgccttgacc tcagtctcca tctcgacgat
     5581 gccgcgaatt tcggcaagaa accacggatc aatcttgcag gcatcgtgga ttgtctcatt
     5641 cgaaatgcct aggcgcattg cctgagcgac gactaaaatt cgatcgggcg tcggggcgcc
     5701 gagcgccgcc cgaatggcgt tcttgtcgtc gccttcaccg agccctttga tattgatctc
     5761 gtcaagcccg gtcagtcctg tctcgagcga gcgcagcgcc ttctgcagcg attcctggaa
     5821 ggtccggccg atcgccatca cttcaccgac cgatttcatc gaggtggtga ggagcggctc
     5881 ggcgccgggg aacttttcaa acgcgaagcg tggcaccttg gtgacgacgt agtcgatggt
     5941 cggttcgaac gaggcgggcg tggccccgcc cgtgatgtcg ttttcgatct cgtcgagggt
     6001 gtaaccgacc gcgagtttgg ccgccacctt ggctatcggg aagccggtcg ccttggaggc
     6061 gagtgcagag gagcgcgaca cgcgcggatt catctcgatg accaccagac ggccgtccgt
     6121 cggattgaca gcgaactgca cattggaacc gccggtctcg acgccgatct cgcgcaacac
     6181 cgcaatcgaa gcgtcgcgca tcatctggta ttccttgtcc gtcaaggtca gtgccggtgc
     6241 gactgtgatc gagtcgccgg tgtgaacgcc catcgggtcc aggttctcga tcgagcaaac
     6301 aatgatgcag ttgtcgcgtt tgtcgcgcac cacctccatc tcgtattcct tccagccgag
     6361 cacgctttcc tcgatcagca cctcggtggt gggtgaggcg tcgaggcccc gctcgacgat
     6421 gtcgagaaat tcctccctgt tgaaagcgat gccgccgcca gtaccggcga gcgtaaacga
     6481 aggacggatg atggctggaa ttccgatgtc cgccagtgcc tccaacgcct cgatgagccc
     6541 cttggcaata tatcggcgct tacgttcggc ctcaccagcc gcccaggcgc cttcaaaggc
     6601 cgcaattgcg cgccgctcgt cgtcggctaa cagaccacgc gttttgacgc gatcgatctc
     6661 agcctggtgg tgatcgcggt cagccttctt gagatcggag gcattggcga gcgacgattt
     6721 cggcgtttcg aggccgatcc gctgcatggc ctcgcggaac aattcccgat cctcggcctt
     6781 gtcgatcgcc tcggcggtgg cgccgatcat gatgacgccg aacttgtcga gtacgcccat
     6841 gcggcgcagc gataatgcgc agttcagtgc ggtctggccg cccatagttg gtaaaagggc
     6901 gtcggggcgc tccttctcga tgatgcgggc gacgatctcc ggagtgatcg gctccacata
     6961 ggtggcgtcg gcgacatccg gatccgtcat aatagtggcc ggattggaat tgacgagaac
     7021 gatgcgatag ccctcagcct tcagagcttt gcaggcttgg gtccctgaat aatcaaattc
     7081 acaggcctgg ccgatgacga tcggtcctgc accgataatc agaatggtgg aaagatcggt
     7141 tcgttttggc attcgttacc ggcaaacaga ctggtctaat ccttccccgt cttagggaag
     7201 gcggcaaagg aacgtacttt tggcgaagcg gggtcgggta ggacgctttc gtcgtgccat
     7261 gtgaccccac ccggccgcgc tacgcacgtc cgccctcccc gaagaggggc gggaggcaca
     7321 aaaaagggcg tcgtccccag cgccgcccct caagtttcca ggcctgcgga tggtcatccg
     7381 tcgcggcggc cggagcctta ccccataatt ttggaagagg gaagggctta ccacgcaacc
     7441 ggaccgaaaa cggacaaatg gtgcacaata aaatcaaaa
//
LOCUS       DATILV010000390         7253 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1626731, whole genome shotgun sequence.
ACCESSION   DATILV010000390 DATILV010000000
VERSION     DATILV010000390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7253
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1626731"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1082)
                     /locus_tag="VLJ17_08965"
     CDS             complement(<1..1082)
                     /locus_tag="VLJ17_08965"
                     /inference="COORDINATES: protein motif:HMM:NF013974.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HSV23145.1"
                     /translation="MARKDKSPQGLAAKGRDLSRRKFMAGVALTGAATAVSPQDPAHA
                     AAAPEATTDALPARLPSALRPNAQMAAAETGTPKELGKATGPDGSDFMVDVIKTLNID
                     YVFSNPASSFRALHESLIDYGSNKKPEFITCMHEESSVGMAHGYFKATGKLGMMLCHG
                     TVGLQHATMAIYNAWCDRVPLIAIGGNDLDAAYRAPGVPTYHSAQDINAIVRDFTKWD
                     DQPVSLQHFAQSFVRAYKIAMTPPHEPVMIALDLGLQQEPVKAHERETLYIPKYVPTA
                     PPQADTGAVREAARLLANAERPVIVADRAARTPAGTRLLVQLAEALQAPVIDQGGRMN
                     MPNTHYLNQTARNAALINNADVIIGL"
     gene            1381..1857
                     /locus_tag="VLJ17_08970"
     CDS             1381..1857
                     /locus_tag="VLJ17_08970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSV23146.1"
                     /translation="MDLQIRRIVTGHDADGRAVVKIDEICRNLISTRKGQQSCLVWTT
                     DSAPANNDTDEDASQRPVATTVAGGTVFRIVRYDPGVAPRNHRTDSIDYAVVLAGEID
                     MELDGNTVKLKAGDALVQRGTIHNWVNRGAEPCVIAFVLIDAKPVVVGHRKLDATG"
     gene            complement(1869..2177)
                     /locus_tag="VLJ17_08975"
     CDS             complement(1869..2177)
                     /locus_tag="VLJ17_08975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ETC complex I subunit"
                     /protein_id="HSV23147.1"
                     /translation="MTTARIYKPAKTAMQSGTAATKSWVLDFEQAGPKMVEPLMGWTS
                     SSDTRQQVRLRFASKEEAIAYCEHHGIAYQLVDPNPPKRRTIAYADNFAYSRRTPWTH
                     "
     gene            2324..2539
                     /locus_tag="VLJ17_08980"
     CDS             2324..2539
                     /locus_tag="VLJ17_08980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23148.1"
                     /translation="MTSDEIKVALKRMDELRAYGVRLLLDNGTTVLAHEWHDDDIKDG
                     LLRVMVRGRHAMIAISRIVLIEAVPPP"
     gene            complement(2676..3824)
                     /gene="rnd"
                     /locus_tag="VLJ17_08985"
     CDS             complement(2676..3824)
                     /gene="rnd"
                     /locus_tag="VLJ17_08985"
                     /EC_number="3.1.13.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041358930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016891 - RNA endonuclease activity,
                     producing 5'-phosphomonoesters [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HSV23149.1"
                     /translation="MNLVTTTADLAAACSRMSRHAFVTVDTEFLRETTYYPLLCVAQM
                     ATSDEAIVIDALASELSLTPFLELMANEGVLKVFHAARQDIEIVWHQAKLIPRPIFDT
                     QIAAMVLGYGDSISYDQLVHRVTGDILDKSHRFTDWSHRPLSAAQIRYAISDVTHLRE
                     VFLLLSADLQRRGRSEWVEEEMEILTSPDTYRADPETAWERLKTRVRKPKELSVLIEV
                     AAWREREAQSRNVPRGRVLKDEAIGDIAIHAPTTPERLALLRSLPRGFERSKWGTEIL
                     EAVKRGLARNHSELPRLGKPRQSLNGSATVELLKVLLRMASEQHGVAAKVIATVDDLE
                     RIALDDDADVPALHGWRREMFGEQAIALKRGQLALAVDGGRVIVVDRS"
     gene            complement(4293..5918)
                     /locus_tag="VLJ17_08990"
     CDS             complement(4293..5918)
                     /locus_tag="VLJ17_08990"
                     /inference="COORDINATES: protein motif:HMM:NF006122.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSV23150.1"
                     /translation="MHTTTTAEAVVASLVAHRIETLYALPGVHNDHLFDALFKASDRI
                     GVVHPRHEQGAGYMALGAAIATGRPSAYAVVPGPGLLNTGAALLTAYAMNAPVLGLIG
                     QIPEADIGRGLGHLHEIRDQAGIISRLVDFSARLKAPAEASAKVAMAIASMSTGRRGP
                     AALECAIDMWDRPGAGPLMAPQPTNDPAIDEDAIMAAAKMLGTAKRPMIICGGGAQAA
                     SAEVTALSTMLQAPVLGYRRGRGVLDSRNPLSVTLPLGRELWGEADTVLGVGTRMFYP
                     LKQWGIDDNIAVIRIDCDPEEPARLHQPEVALVGDAAPILRRLLDILPAHNTKRPSRK
                     EEMRARHARWNARFEKLTPQRAFLDAIRAELPEDGILVDEVTQMGFAARLAFPVYRPR
                     TFLSPGYQDNLGWGYATALGVQHARPDVPVVAISGDGGFMFTANELATAVRHRIPLVA
                     IVFNDGAFGNVRRIQAEQYGDRLIACDLANPDFLKFAESFGAAAERAKDPAGLCVALR
                     RGFAHRDGPTLIEVPVGPMPSPWEFIHMPKVRG"
     gene            6185..>7253
                     /gene="aspS"
                     /locus_tag="VLJ17_08995"
     CDS             6185..>7253
                     /gene="aspS"
                     /locus_tag="VLJ17_08995"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HSV23151.1"
                     /translation="MHRYRTHTCGALRADHIGSRVRLSGWCHRIRDHGGVLFIDLRDH
                     YGVTQIVADPDSPAFKTAEKLRAEWVVRADGLVRRRPDGTNNPDLSTGDIEVFASDIE
                     VLGPAGELPMPVFGDQEYPEEIRLKYRFLDLRRERLHRNVIKRGAIIDSLRRRMKEQG
                     FFEFQTPILTASSPEGARDFLVPSRLHPGKFYALPQAPQQFKQLVMISGFDRYFQIAP
                     CFRDEDARADRSPGEFYQLDIEMSFVAQEDVFAAVEPVLRGVFEEFGGGKPVTPNFPL
                     IPYAQALRSYGSDKPDLRNPIKMQDVTVHFRGSGFKVFAGMIAADPAVEVWAIPAPKG
                     GNRAFCDRMNSWAQGEGQPGLG"
BASE COUNT         1312 a         2198 c         2332 g         1411 t
ORIGIN      
        1 tcgaggccga tgatgacgtc ggcattgttg atcagggccg cgttacgggc ggtctgattg
       61 agataatggg tgttgggcat gttcatccgg ccgccctggt caatcaccgg ggcctgcagg
      121 gcctcggcga gttgaaccaa caaccgcgtc ccggccggtg tgcgggcggc tcgatcggcg
      181 acgatgacgg ggcgctccgc attggcaagc agcctcgcgg cttccctcac cgcaccggtg
      241 tcggcctggg gcggcgcggt cggaacatat ttcggaatgt agagggtctc gcgttcgtgg
      301 gccttgaccg gttcctgttg cagcccgagg tcgagcgcaa tcattaccgg ctcatggggc
      361 ggcgtcatcg cgatcttata ggcgcgcacg aatgactggg caaagtgctg cagcgagacc
      421 ggctggtcgt cccacttggt gaaatcgcgg acgatggcgt tgatgtcctg ggccgagtga
      481 taggtcggta cgccgggcgc ccgataggca gcatcaaggt cgttgccgcc gatggcgata
      541 agtggcacgc ggtcgcacca agcattgtag atcgccatgg tggcatgttg cagaccgacc
      601 gtgccgtggc acagcatcat cccaagcttg ccggtcgcct tgaaataacc gtgggccatg
      661 ccgaccgacg actcttcgtg catgcaggtg atgaattcgg gcttcttgtt gctgccgtaa
      721 tcaatcaaag attcatgcaa cgcgcggaag ctcgacgccg ggttggagaa aacatagtcg
      781 atgttcaggg tcttgatgac atcgaccatg aaatccgatc cgtccggccc agtcgccttc
      841 cccaattcct tcggggtccc ggtttcggcc gcggccattt gggcattcgg gcgcagcgcc
      901 gaagggagcc gtgccggcag tgcgtcagtc gtggcctctg gcgcggccgc ggcatgcgca
      961 gggtcttgcg gtgacaccgc ggtggcggcc cccgtcaagg caaccccagc cataaatttg
     1021 cgtcggctta aatcccgtcc cttcgctgcc aaaccttgtg gacttttgtc cttgcgagcc
     1081 atgagttcct ccttgtgcgg gccccgcgcg gggagaggcc aatgcgatcg cttcgctcgc
     1141 cgctatgggc attcttatga aaagcgccaa attctaggtt accatgacag gcgcctatgt
     1201 catctgggaa ttcagtttgc cccgccatag tcgctaaggc cccttgtcgc catgcactcc
     1261 agcaggctgc aacctcatgt tggacgttgg atgttgcctt gtggcttcgg ggggcatttc
     1321 gacggcgggc acacggggcg cgcgcgcgcc cgcgcggatg ctcgatcgag ggggaacgat
     1381 atggatttgc agatccggcg tattgtgacc ggccacgatg ccgacgggcg tgcggtggtg
     1441 aaaatcgatg aaatctgccg caacctgatt tcgacccgca agggccaaca atcctgcctg
     1501 gtgtggacca cagacagcgc tccggccaac aatgacaccg acgaagatgc ctcgcagcgc
     1561 ccggtcgcaa ctacggttgc gggcggaacc gtcttccgca tcgtgcgcta cgacccgggc
     1621 gtcgcgccgc gcaaccatcg cacggactcg atcgactacg cggtcgtgct cgctggcgag
     1681 atcgacatgg aactcgacgg caatacggtc aagctgaagg cgggcgacgc gctggtgcaa
     1741 cgcggcacca ttcacaattg ggtcaaccgc ggggctgagc cgtgcgtcat tgcgtttgtg
     1801 ctgatagatg cgaagcccgt tgtggtcggc cacagaaagc ttgacgcgac cggctaaact
     1861 ccccgtggtc agtgcgtcca cggggtgcga cgcgaatacg caaaattatc cgcataggcg
     1921 atggtgcgcc gcttcggcgg attgggatcg accagctgat aggcgattcc gtgatgctcg
     1981 caataggcga tagcctcttc cttggaggca aaacgcagcc gcacctgttg gcgcgtgtcg
     2041 gacgaactgg tccatcccat gagcggctcg accattttgg gccccgcttg ctcgaagtcc
     2101 agtacccatg atttggtcgc agcggtgccg gattgcatcg cggtcttggc aggcttgtat
     2161 atgcgtgcgg tggtcatgac caacggcgtc ttgaggagga aaatcttgcg ttcagcttgg
     2221 catacaggaa ccggcctggc ggtcaagggc accgttcgcg cggaggggcg gtggttctcc
     2281 tccattgcgg gatacgaatg ggtgggcacg aaggcgcgct gcagtgacga gtgacgaaat
     2341 caaagtcgcg cttaagcgaa tggatgagct tcgcgcctat ggggtgcgcc tgctccttga
     2401 caacggcaca acggtcctcg cccatgagtg gcatgatgat gacataaagg atgggttgct
     2461 gcgcgtcatg gtgcgcggcc ggcacgccat gatcgccatc agtcgcatcg tcctgatcga
     2521 ggcggtgccg ccgccgtaac ggaaccttgt cgcccgtgct tcgtcacgaa gtgcgcgtag
     2581 ccttgcacgg cgcttatcat cgggctcacc caatggggcc caactttggt cggcccgacg
     2641 acgggcatcg gcggtaccca gtgacgccgt ccatgctatg agcggtccac cacaatgacc
     2701 cgtcccccgt ccactgctag cgccagttga ccgcgcttga gcgcaattgc ctgttcgccg
     2761 aacatttcgc ggcgccatcc gtgcagcgcg ggcacgtcgg catcatcgtc gagggcgata
     2821 cgttcgaggt cgtcaacagt cgcgatcacc ttggcggcga ccccatgctg ttcggaggcc
     2881 atgcggagca gcaccttgag aagttcgacc gtggcgctgc cgttgagact ctgccgcggc
     2941 ttgccgagcc gtggtagttc agagtgattg cgggcaagcc cgcgcttgac ggcctcaaga
     3001 atctccgtgc cccatttgga acgctcgaag ccccgcggca gtgaccgcag taacgcaagc
     3061 cgttccggtg tggtcggcgc gtgaattgcg atgtcgccga ttgcctcgtc cttgagcaca
     3121 cggccgcgtg gcacgttgcg cgactgcgcc tcgcgctcgc gccaggccgc gacctcgatc
     3181 aagacgctga gctctttcgg cttgcgcaca cgcgttttca agcgttccca agcggtctct
     3241 gggtcggccc gataggtatc tggagaggtt aggatctcca tttcctcttc gacccactcg
     3301 ctgcgtccgc gtctttgcag gtcggctgaa agcaaaagga acacctcgcg caaatgcgtc
     3361 acgtcggaaa ttgcgtatct gatttgcgcg gcggacaacg gccgatgtga ccaatcggtg
     3421 aagcgatgcg acttgtcgag gatgtcgccg gtgacgcggt gcaccagttg atcataggaa
     3481 atggagtcgc cgtagcccaa taccatggcg gcgatctggg tgtcgaaaat tggacgcgga
     3541 atgagcttag cctgatgcca aacgatttcg atgtcctggc gcgcggcgtg gaacaccttg
     3601 agcacgccct cattcgccat cagttcgaga aacggtgtca gactcaattc cgaggcaagc
     3661 gcatcgatga cgatggcttc gtcggaagtc gccatttgag caacgcacaa cagcggataa
     3721 taggtggttt cgcgcaggaa ttcggtatcg acggttacga aagcgtggcg cgacattcgc
     3781 gagcatgccg ccgcgagatc ggctgtggta gtcaccaagt tcattccaag ttcttaccgg
     3841 agtcagcatg ccctgtcgcg ggcggagaac gctcgctttg cgtgtattag actctgaggt
     3901 cgcctcagca tacctaaaat acagaatgcg aaacacgtga caattgattg ttatcctgat
     3961 cgtttatccc cccttacggt ttgctcgcgc ggtcgctggg gtatctcggc gcaaggtcga
     4021 ggttccacgc caggactccg cgccagcagg actccgcgcc agcaggactc cacgccagaa
     4081 cttgccgcca tcctctgcag cacaagccga tttggacctc ggtggtttgg cgacggttct
     4141 tcctttttgt ccgctcatct gcgggcaccg cgcccgagga tgagattggg gataattgtg
     4201 gggataagcc ggaaaattga agcagcttga agcctttccg tctcccattg ctgagcttgt
     4261 taacactggt ttgggcagca ggtatctggt gtttaccccc tcaccttcgg catatgaatg
     4321 aactcccatg gggacggcat cggcccgacc ggtacctcga tcagagtcgg cccatccctg
     4381 tgggcgaaac cgcgtcgcag agccacgcac aggcccgccg ggtccttggc ccgctcggcc
     4441 gctgcgccga aactctcggc aaatttcagg aaatccggat tggctagatc gcaggcgatc
     4501 aggcggtcgc cgtattgctc agcctggatg cggcgcacat tgccgaacgc gccgtcgttg
     4561 aacacgatgg cgaccagcgg aatgcggtgg cggaccgcag ttgcgagctc gtttgccgtg
     4621 aacataaagc cgccatcgcc agagatcgcc acgaccggca cgtcgggccg tgcgtgctgg
     4681 acgccgagcg cggtcgcata cccccagccg agattgtcct ggtaaccggg cgacaggaac
     4741 gtacgtggcc tgtaaaccgg gaacgcgagg cgtgcggcga aacccatctg ggtcacctcg
     4801 tcgaccagaa tgccgtcctc cggcaattcc gcccggatag catcgaggaa ggcccgttgg
     4861 ggggtaagct tttcaaagcg cgcattccag cgcgcgtgcc gcgcgcgcat ttcctccttg
     4921 cgtgagggcc gtttggtgtt gtgggcaggc aatatatcga ggagccggcg cagaatgggc
     4981 gccgcgtcgc ccaccagggc cacctccggc tgatggagcc gcgcgggctc ctcaggatcg
     5041 cagtcgatcc ggatcacggc gatgttgtcg tcgattcccc attgcttgag gggatagaac
     5101 atccgcgtgc caacgccgag aaccgtatcg gcctcgcccc acagctcgcg gccgagcggt
     5161 agcgtaacgc ttagtggatt gcggctgtcg agcacgccgc ggccgcgccg atagccaagc
     5221 acgggcgcct gcagcatggt ggagagcgcc gtcacctcgg cggacgccgc ttgcgcgccg
     5281 ccgccgcaga tgatcatcgg gcgcttcgcc gtgcccagca tcttagcggc agccataatc
     5341 gcatcttcgt cgatcgccgg atcgttcgtc ggctgcggcg ccatcagcgg cccagcgccg
     5401 ggacgatccc acatgtcgat agcgcattcg agtgccgctg ggccgcggcg gccggtagac
     5461 atagacgcaa ttgccatcgc caccttggca gaagcttctg ccggtgcctt gaggcgggcg
     5521 gaaaaatcga ccagccgcga gatgatgccg gcctgatcgc ggatttcatg gagatgaccg
     5581 agaccgcgac cgatgtcggc ttccgggatt tgcccgatca gtccgagcac cggagcgttc
     5641 atcgcatagg cggtgagcaa cgccgcgccg gtgttgagga ggccggggcc gggaacgacc
     5701 gcgtaggccg aggggcgccc cgtcgcgatt gctgcgccca gcgccatgta gccggcgcct
     5761 tgttcatgac gcgggtggac cacgccgatg cgatcggatg ccttgaacag tgcgtcaaac
     5821 agatgatcgt tgtggacacc tggcagggcg tagagcgtct cgatgcgatg ggcgacgagc
     5881 gaggcgacga cagcctccgc cgtggtcgtt gtgtgcatga aagccaccgt gcatttgtta
     5941 tcggcacatg tgcagatcgg gccgttgctg tcgagagcag gcggtgtagg gtgttgcaat
     6001 gcctgccacg tcgggtatta ccagcgctac aaaactctga cctgtcatgc cccgcgcggg
     6061 gcggggcatc cagtaactgc cggtcgttgc aaattccccc atgggttcaa cgcgcatgcc
     6121 cggtggttgg tggatcgtcc gctttcgcgg acaatgataa ttgtcaggca tctctgaggg
     6181 cgcgatgcat cgttatcgca cacacacttg cggcgcgttg cgcgccgatc acatcggctc
     6241 cagggtccgg ctttcgggat ggtgccaccg catccgcgat catggcggcg tgctgttcat
     6301 cgatctgcgc gaccactacg gcgtgaccca gatcgtcgca gaccccgact cgccggcctt
     6361 caagaccgcg gaaaagctgc gcgccgagtg ggtcgtgcgc gccgatggcc tggtgcgccg
     6421 gcggccggac ggcaccaata atcccgatct gtcgaccggc gacatcgagg tgttcgcaag
     6481 cgacatcgag gtgctggggc cggccggaga gctgccgatg ccggtgttcg gtgatcaaga
     6541 atatccggaa gagattcgcc tcaagtaccg cttcctcgac ctgcggcgcg agcgcctgca
     6601 ccgcaatgtc atcaagcgcg gcgccatcat cgattcgttg cgccggcgca tgaaggagca
     6661 aggcttcttc gagttccaga ccccgatcct gaccgcgtcg agcccggaag gcgcgcgcga
     6721 ctttctggtg ccgtcgcggt tacatccagg aaaattctat gcgttgccgc aggcgcccca
     6781 gcagttcaag caactggtga tgatttcggg cttcgaccgc tatttccaaa tcgcgccatg
     6841 ctttcgcgat gaggacgcgc gagccgaccg ctcgcccggc gagttctacc agctcgacat
     6901 cgagatgagc ttcgttgcgc aggaagacgt gttcgcggcg gtcgaaccgg ttctgcgtgg
     6961 cgtgttcgag gagttcggcg gcggcaagcc agtgacgccg aactttccat tgatccccta
     7021 cgcgcaggcg ctgcgcagct atggctccga caagccggac ttgcgcaatc ctatcaagat
     7081 gcaggatgtc actgtccact tccgcggctc cggcttcaag gtgtttgccg gcatgatcgc
     7141 tgcggatcca gccgtcgagg tctgggcgat cccagcgccc aagggcggca atcgcgcctt
     7201 ttgcgaccgc atgaattcct gggcccaggg cgaaggccag ccgggcctcg gtt
//
LOCUS       DATILV010000391         1848 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1372770, whole genome shotgun sequence.
ACCESSION   DATILV010000391 DATILV010000000
VERSION     DATILV010000391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1848)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1848)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1848
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1372770"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1352)
                     /locus_tag="VLJ17_09000"
     CDS             complement(<1..1352)
                     /locus_tag="VLJ17_09000"
                     /inference="COORDINATES: protein motif:HMM:NF024806.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV23152.1"
                     /translation="MNGTQKIVSLAMVAALGLNLGVAVGTRAQATQAPAGQEAAGAKP
                     QYTMPEYTAYQTAAADKNPASQIKALDDFVTKYPNSALLIYVYPLYYQAYSQLKNYPK
                     VIEYADKVVALGEKVDAGARYQALYARAFAYNAMIADPASKTAATDAALAKSALDAAV
                     AGLKALDEVKKPESMSDDAFATQKKQIQIYFHGTAAQAGMVLKDYNAAVQHYKAVLAL
                     NPDDAITSYRLGLAYMAMAPPQQMNAFWSIARAVTAKGATKAQSDKVKDYLRKLIVNY
                     QQAACDNLTDAELNELLQLASSSPERPESYKLPSADDLTAARKDMTMRSVVEDLKAGG
                     DKAKVTWLAACGLEFPEVPGKVIEVTPGTDSVQLKVAFVTSEAEFESASTPNMDVKVV
                     GQPEAAKLEKNGAVHFTGTLVSFDPDPAFMLHFDKAKVKEEDLPKEGTKKPAPRRPAA
                     "
     gene            1645..>1848
                     /locus_tag="VLJ17_09005"
     CDS             1645..>1848
                     /locus_tag="VLJ17_09005"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSV23153.1"
                     /translation="MPQSRNSGAQNADGKPLSESLALVTGGSRGIGRAIALRLASLGA
                     AVAVCGRDADALNNVSAQLAGLGG"
BASE COUNT          366 a          551 c          480 g          451 t
ORIGIN      
        1 ttggccgccg gacgtcgagg ggcgggcttc ttggttcctt ctttcggcag atcctcttcc
       61 ttaaccttag ccttgtcgaa atgcaacatg aacgcaggat caggatcaaa ggagaccagc
      121 gtgccggtaa agtgcaccgc cccgttcttt tccagtttgg ctgcttccgg ctgcccaaca
      181 actttcacgt ccatattagg cgtgctggcc gattcaaatt ccgcttcact ggttacgaac
      241 gcaactttca gctgtaccga gtcggtcccc ggcgtaacct cgatcacttt gccaggcacc
      301 tccggaaatt ccagaccgca ggccgccagc caggtgacct tagccttgtc tccaccggct
      361 ttgagatctt ctaccacgga cctcatggtc atatccttgc gcgccgccgt aaggtcgtcc
      421 gcgctcggca acttgtagct ctctggacgc tcgggcgagc tgctcgccaa ttgcagcaat
      481 tcgttcagct ccgcatcggt gagattgtca caagccgctt gctgataatt tacgatcaac
      541 ttgcgcagat aatctttcac tttgtcggat tgcgccttcg tcgcgccttt cgcggtgacc
      601 gctcgagcaa tggaccagaa ggcattcatc tgttgcggag gcgccatagc catatacgcc
      661 aaccctaagc ggtagctggt gatggcatca tcgggattca gcgccagtac agccttgtaa
      721 tgttgcaccg cggcattgta atcctttagg accatcccgg cctgcgccgc agttccatgg
      781 aaataaattt gtatctgttt tttctgcgta gcaaacgcat cgtcactcat ggactcaggc
      841 tttttcactt cgtccagagc tttcaagccc gccactgccg catccaacgc gctcttggcc
      901 agcgccgcgt cggtagccgc agtcttagac gccggatcag caatcatggc gttgtaagca
      961 aaggcacgcg catacagcgc ctggtaacgc gctcccgcgt ccaccttttc gcctaacgcc
     1021 accaccttat cggcgtactc aattaccttt ggataatttt ttagctggct ataggcttgg
     1081 taatacagcg ggtagacata aatcaaaagc gcggagttcg gatacttggt cacaaaatcg
     1141 tccagcgcct ttatttgcga cgcaggattt ttatccgccg cggcagtctg gtaggcggtg
     1201 tactccggca tggtgtactg cggcttggcg ccagccgctt cttgccctgc cggtgcttgc
     1261 gtcgcctggg cccgcgtgcc gaccgccact ccgagattta gaccaagcgc cgcgaccatc
     1321 gcgaggctca ctattttctg tgttccattc attccgatct ctcctcgctc aaactacaac
     1381 cgttgggatt ctatgcccgt tcgcacgggt catctctacc cggaatttct gctatcgttc
     1441 ggaaaactct gggattatag ggaagacgca aggcctccgc aagtcgttac gtacatcaaa
     1501 aataatctac tgaggttttc gaactgccgt cctgctgtat cattgcgtga atcattgcgt
     1561 gattcgtcag gcgactggac gtcggcctcc aatgttaaga tgagtttcgc ataaaaaccg
     1621 tggtccgcac gagaaagaat ttggatgcct caatcacgta actcgggtgc tcaaaacgcg
     1681 gacggaaaac cccttagcga atccttggcg ctggtgaccg gcggtagccg cggaatcggc
     1741 cgcgccatcg ccttgcgctt ggcctcgctg ggcgcggctg tggctgtttg cggtcgcgac
     1801 gccgacgcgt taaataacgt gagcgcgcaa ctcgcaggcc tgggagga
//
LOCUS       DATILV010000392         2294 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2650373, whole genome shotgun sequence.
ACCESSION   DATILV010000392 DATILV010000000
VERSION     DATILV010000392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2294
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2650373"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1301)
                     /locus_tag="VLJ17_09010"
     CDS             complement(<1..1301)
                     /locus_tag="VLJ17_09010"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HSV23154.1"
                     /translation="MVQVLRGGVALAALLAWAVGSAGVTAAQPRPSTKSPAASSAPMP
                     NAIKQPDQELDSIRAEQRKSSETEQRLATENDAISDDRRKLNQSLISAASRIRATEER
                     VAAMEIHVRQLESSEADIRRSLDERHALIADILAALQRIGHRPPPAVFVGAADAIESL
                     RTAMSLEAVLPQIRNETNKLQVELASLTRVKIAKTAEHTELAAQLAELATMQKKMATL
                     VEERQTRQSEIEQAITAERQRAATLSRQVDNLKDLIGKLEPGGDSTKRTTRAPTKSGL
                     SALNDPARMGPAIAFVSAKGRLSLPVSGARIREFGAPDGAGGTEKGTSVATRPGAQVT
                     APSDGWVVYAAPYRSYGQLLILNVGGGYHVLLAGMERITVDPGQFVLTGEPVAVMGSG
                     TRVASVSTAGSSSAIGSPQPVLYIEFRKDGTPVDSSPWWAAT"
     gene            complement(1491..1973)
                     /gene="rlmH"
                     /locus_tag="VLJ17_09015"
     CDS             complement(1491..1973)
                     /gene="rlmH"
                     /locus_tag="VLJ17_09015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HSV23155.1"
                     /translation="MRIVVTAVGRLKAGPDRQLAERYRDRAIKVGRTLGLRGLDIIEI
                     KESRAHEAERRITEEAIALVSAIPDDAIKVVLDSRGQNASSDALAGRIRGWRDGGRQV
                     LCFVIGGADGLAAGLLDNADMIFAFGSATWPHQLVRIMLMEQVYRAMTILSSHPYHRG
                     "
     gene            complement(2103..>2294)
                     /gene="rsfS"
                     /locus_tag="VLJ17_09020"
     CDS             complement(2103..>2294)
                     /gene="rsfS"
                     /locus_tag="VLJ17_09020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020180101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HSV23156.1"
                     /translation="DRVLEDLRDAGLTGLRVEGMPHCDWVLIDACDVIVHVFRPEVRA
                     FYNLEKMWSRGRIATRQAS"
BASE COUNT          448 a          729 c          636 g          481 t
ORIGIN      
        1 gttgcggccc accacggact cgaatcgacc ggtgtaccat ccttccggaa ctctatatat
       61 agcaccggtt gaggcgaacc aatcgcggaa gatgagccgg ctgtagaaac agatgcaact
      121 cgcgtgccgc ttcccatcac cgcaaccggc tcgccggtca gaacgaattg gcccggatcg
      181 accgtaatcc gctccattcc ggcaagtagc acatgatagc cgccaccgac gttaaggatc
      241 aagagttgtc cataagatct gtagggcgct gcgtagacga cccacccgtc gctgggcgcg
      301 gtaacctggg cccctggtcg cgtcgcaact gaggtccctt tctcggtgcc ccccgctccg
      361 tctggcgccc caaattcacg tattctagca ccacttaccg gcaaggacag cctgcccttg
      421 gctgaaacaa aagcaattgc cggccccatt cgggctgggt cattgagagc cgaaaggccc
      481 gacttggtcg gagctcgcgt ggtacgtttc gtgctgtcgc ctcccggttc aagctttccg
      541 atcaaatctt tgagattgtc gacttgtcga gacagcgtgg ccgcccgctg ccgctcggcc
      601 gtgatggcct gctcgatctc ggactgtcgt gtttggcgtt cttcaacgag cgtcgccatt
      661 ttcttttgca tggtggcaag ttcggccaat tgagcggcga gttcagtatg ctcggccgtc
      721 tttgcgatct tgacgcgcgt caagcttgca agctcgacct gaagcttatt ggtctcgttg
      781 cgtatctgtg ggagcacggc ttccagcgac atcgcggtac gcaacgactc aatagcgtcc
      841 gctgccccga caaaaaccgc gggcggaggc cggtgcccaa tacgctgcag cgctgccaag
      901 atgtcggcga tcagcgcatg tcgctcgtcg agtgacctgc gaatgtcagc ctcactgctc
      961 tcaagttggc gtacgtggat ttccatcgcc gcaacccgct cctcggtggc gcgaatccgg
     1021 gaagcggcag agatcagcga ttgatttagc ttgcggcgat cgtcgctaat tgcatcgttt
     1081 tcggtcgcca gccgctgctc ggtttccgaa gatttgcgtt gttcggcccg gatcgaatca
     1141 agctcctgat caggctgttt gatcgcattg ggcataggcg cgctcgaggc ggccgggctc
     1201 ttggtcgacg gtcgtggctg cgccgcggtc acgccagcag acccgaccgc ccatgccagc
     1261 aacgctgcca aggccacacc gcctctaagg acctgcacca ttcggtcaga gaatatcatg
     1321 ggctcccggc gactgtaaaa aggtcaaaat tcaacccatt cccacaagcc tttataagga
     1381 cgaattgggg cagtatcagg ccatcacgct cccgactagc ccgccgcatt tcggcccatc
     1441 tcaatcggac gcgatcactt tggtttccaa gcgatatttt ccgggcgacc tcaaccgcgg
     1501 tggtacgggt ggctggatag gatcgtcatc gccctgtaaa cctgctccat cagcatgatt
     1561 cggacaagct gatgcggcca agttgccgat ccgaatgcga agatcatatc ggcattatcc
     1621 aacaaccccg ccgcaagacc gtccgccccc ccgatgacga agcataggac ttggcggcca
     1681 ccatcgcgcc agccgcgaat tcgccccgca agcgcgtcgc ttgaagcatt ttggccccgg
     1741 ctatccaaga caaccttgat ggcgtcgtcc ggaatggcgc tgaccagcgc gattgcttct
     1801 tcggttatgc ggcgctccgc ttcgtgggcc cgactctcct tgatctcaat gatatcgagc
     1861 ccgcgcaggc cgagcgttcg cccaaccttg atggcgcgat ccctataacg ctcagcaagc
     1921 tggcgatcgg gccccgcctt gaggcggcca acagcggtga ccacaatccg catcaatcga
     1981 actccggcgt ggcggcgcca acttgcgcgt acggttgtcc gaacggtacg cactttggcg
     2041 aaacctccgt ttcgcactcc gttcgatttc gttcaaatct aacgtttttc cggaatcttg
     2101 cgttagctcg cttggcgcgt cgctatgcgg ccgcgcgacc acatcttctc gagattgtag
     2161 aaggcacgaa cttccggtct aaaaacgtgg acgatcacgt cgcaggcatc gatcagcacc
     2221 caatcgcaat gaggcatccc ctcgaccctg agaccggtga gcccggcgtc acgaagatct
     2281 tcaaggacgc gatc
//
LOCUS       DATILV010000393         2297 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2139178, whole genome shotgun sequence.
ACCESSION   DATILV010000393 DATILV010000000
VERSION     DATILV010000393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2297
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2139178"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..209
                     /locus_tag="VLJ17_09025"
     CDS             <1..209
                     /locus_tag="VLJ17_09025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HSV23157.1"
                     /translation="VTTKTGQLESKDEIKRRIEAATKFADIDQLCLSPQCGFASTEEG
                     NVLSEDEQWAKLAMIVEVANEVWD"
     gene            complement(282..1664)
                     /locus_tag="VLJ17_09030"
     CDS             complement(282..1664)
                     /locus_tag="VLJ17_09030"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSV23158.1"
                     /translation="MTALSRRRFLAASAASAACVGAPAVAAPVKGQVDIAIIGAGAAG
                     IAAARRIASTKARIAFIEASDRVGGRCFTDTSTFGVPFDRGAHWIRMPEANPVTPLAA
                     KSGFDIYPAPPNQRMRIGRRNARAGEMEDYLTALVRANRAIGEAGRGRLDVPCAQVLP
                     KDLAEWQQTVEFVLGPFGCAKDLVDVSAADFARSAEHEGEAFCRQGFGALIAKLADGL
                     PVQLSNPATRIDWSERSYIEIRTAKGRLYASTVIVTVSTGVLSSDKLKFDPELPRRHL
                     DAIEKLRLGSYDHIALELPGNPLGLQRDELVFEKSDSARTAAILANISGTPLCTIEVA
                     GKFGNDLAASGEAAMVSFVLDWLAGLYGVEIRKAVRRIGATRWNYDPWTLGAFSTAVP
                     GGQWARAALAEPVRDRIFFAGEATHETLWGTVGGAWASGERAADLALKRLGFINERPE
                     PKRPASSRPR"
     gene            1836..>2297
                     /locus_tag="VLJ17_09035"
     CDS             1836..>2297
                     /locus_tag="VLJ17_09035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiiX/YebB-like N1pC/P60 family cysteine
                     hydrolase"
                     /protein_id="HSV23159.1"
                     /translation="MSWAQDRIGRMLARYLEQPATGYEPFTPSNPDTLVRSLKPGDVL
                     LVEGNNHIAGVIKYLTQSTWSHSALYVGPVLGRFPEREPHVLIEAEIGKGVISSPLSK
                     YFKFHTRVCRPVGLTAQDLEKVCRYAIERIGFDYDLKNIIDLMRYLMPLPIP"
BASE COUNT          451 a          700 c          702 g          444 t
ORIGIN      
        1 tggtgacgac aaagaccggg caactcgaat ccaaggacga aatcaagcgt cggatcgagg
       61 cggcaacgaa attcgccgac atcgaccaac tctgcctttc gccacaatgt ggtttcgcgt
      121 ccaccgagga gggcaacgta ctgtccgaag acgagcagtg ggcgaagctc gcgatgatcg
      181 tggaagtcgc gaatgaggtc tgggattaac ttatgtgcgc gaaagttgag gcgttctgct
      241 cctctcccaa caatggggcg cttgcgcagg agagggtgac ctcaccgcgg gcgcgacgat
      301 gccggccgtt tcggctccgg ccgctcattg atgaagccaa gcctcttgag ggctaaatcg
      361 gccgcgcgct cgcccgatgc ccaggcgccg ccgaccgtac cccacagcgt ttcgtgcgtt
      421 gcttcgccgg caaaaaagat gcgatcgcgc accggttcgg caagcgcggc gcgcgcccat
      481 tgaccacccg gtacggcggt cgagaaggca ccgagcgtcc acgggtcata gttccatctg
      541 gttgcgccaa tgcgtctgac ggctttccgg atttccacgc catagaggcc cgcgagccag
      601 tcgagcacaa acgataccat cgccgcctcg cccgaagccg caagatcgtt gccgaatttt
      661 ccggcgactt cgatcgtgca caacggggtg ccggaaatgt tggcgagaat ggcggctgtg
      721 cgggccgagt cggatttctc gaagaccaat tcgtcacgct gcagcccaag tggattgccg
      781 ggcaattcga gcgcgatgtg gtcgtagctg ccgagccgaa gtttttcgat ggcgtcgaga
      841 tgccgtctgg gcagttctgg gtcaaacttc agcttgtcgc ttgacagcac accggtcgat
      901 accgtgacaa tgacggtact ggcatacagg cggcccttgg cggtccggat ttcgatgtag
      961 ctgcgttcgc tccaatcgat ccgcgtggcc ggattcgaca attgcaccgg cagcccgtcg
     1021 gctagcttgg caatcaatgc gccaaagccc tgtcggcaga acgcctcgcc ctcgtgctcg
     1081 gcggaccgcg cgaaatctgc agccgataca tcgacgagat ccttggcaca accgaatggg
     1141 cccagcacga attcgaccgt ctgctgccat tcggcgagat ccttggggag tacctgggca
     1201 cagggcacat ccagcctgcc gcgacctgct tccccgatgg cgcggttagc gcgcaccaac
     1261 gccgtgagat agtcttccat ttcgcctgcg cgcgcgttcc gccgaccaat tcgcatccgc
     1321 tggttgggtg gagcgggata aatgtcgaaa ccggatttcg cagcgagcgg cgtgaccggg
     1381 ttggcctccg gcatacggat ccagtgagcg ccacgatcaa acggtacccc gaaagtcgag
     1441 gtatcggtga agcaccgtcc gccgacccgg tcggacgctt cgatgaaggc gatcctggcc
     1501 ttggtgcttg cgatgcgccg cgccgccgct ataccggcgg cgccggcccc gatgatcgca
     1561 atatcgactt ggcccttgac aggcgcggcg acggccgggg ctcccacgca cgctgccgag
     1621 gcggcggatg cggcgagaaa ccggcggcgg ctgagtgcag tcatgatgaa tcatctgcta
     1681 atgcgccgtt accatgtctc aacggaatgt gtttcgcaaa tggccacaca agttcgtgtg
     1741 tgtctgtgaa ccaaattgca atgacttgtt gttataaatt tgccacaata ccaggcagcg
     1801 cggctgcgac cgtgcgccct ggcgcgggaa gcgttatgag ttgggctcaa gaccgcatcg
     1861 ggcgaatgtt ggcccggtat ctggaacagc cggcgaccgg ttacgagcca ttcacgccca
     1921 gcaatcccga taccctcgtc cgctcgctca agcccggcga tgtgctcttg gtcgaaggca
     1981 acaaccacat tgctggcgtc atcaaatatc ttacccaatc cacatggtcg cattcggcgc
     2041 tctatgtcgg accggtgctg ggtaggttcc cggagcgtga accccacgtg ctgatcgaag
     2101 ccgagatcgg taagggcgtg atctcatcgc cgctgtcgaa atatttcaag tttcacacgc
     2161 gggtgtgccg gcccgtcggg cttacggccc aggaccttga gaaagtgtgc cgctacgcca
     2221 tcgagcgcat cggtttcgat tacgatctca agaacatcat tgatctcatg cgctatctga
     2281 tgccgctgcc gattccg
//
LOCUS       DATILV010000394         5469 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_863573, whole genome shotgun sequence.
ACCESSION   DATILV010000394 DATILV010000000
VERSION     DATILV010000394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5469)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5469)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5469
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_863573"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..298)
                     /locus_tag="VLJ17_09040"
     CDS             complement(<1..298)
                     /locus_tag="VLJ17_09040"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012255150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HSV23160.1"
                     /translation="MSFSDLGLSDKVLAAVASAGYTDPTPIQEQAIPHVLARRDVLGI
                     AQTGTGKTAAFVLPMLTKLEQGRARARMPRTLILEPTRELAAQVEESFDRYGVNH"
     gene            725..1585
                     /locus_tag="VLJ17_09045"
     CDS             725..1585
                     /locus_tag="VLJ17_09045"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV23161.1"
                     /translation="MNWHFVRFATPFLAASAVVVLLPLATAHAEDALSERPTDQISET
                     NKIDSVRKPLAQEASVERAVALRKLLKTRARAYEAADDFQRAEVQYDDIVDVKPVDPM
                     VYIDRGYFYMRQNRFSAAVRDFMTGSRLSPTQSAFSYGAGRALARMGDYLAAIGQYGE
                     AIRLAPGDSAPVLSRAEAYIQLGMYVQARADFDRVIALGLGRDTDRFFIYFGRGYANI
                     RLGEDEAAVRDLDAALSMHPSMVNALVWRGYARERMGQRQQALSDYEQALQVNPSDNW
                     IRSSIRRVRT"
     gene            complement(1672..2607)
                     /locus_tag="VLJ17_09050"
     CDS             complement(1672..2607)
                     /locus_tag="VLJ17_09050"
                     /inference="COORDINATES: protein motif:HMM:NF039614.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine deiminase-related protein"
                     /protein_id="HSV23162.1"
                     /translation="MTSTTARFLMCRPNHFAVDYAINPWMNPTSWARESKVLVDASQR
                     EWAALHRTLAGLGAAIELVPPAPYLPDLVFTANAAVVLDRKAVLARFRYPERRGEEEP
                     FESGFRALQGRGLIDTVVKLPSHLVLEGAGDCVWDRTRNLFWLGYGPRSDRDASEPIR
                     DVFAVDAVPLELADPRFYHLDTALCPLSRGEVMFVPAAFTPEGLSRINERVAPSQRIA
                     VPMEDACRLATNAVCVGDAIVMSNCGEHLRLQLAERGYSVMTTPLQSFLRSGGAAFCL
                     TLRLDWRSAVGAVEDSAAAARSKGALVFATADLRK"
     gene            complement(2632..3855)
                     /gene="rocD"
                     /locus_tag="VLJ17_09055"
     CDS             complement(2632..3855)
                     /gene="rocD"
                     /locus_tag="VLJ17_09055"
                     /EC_number="2.6.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004587 - ornithine aminotransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine--oxo-acid transaminase"
                     /protein_id="HSV23163.1"
                     /translation="MNVMELESRHSAHNYEPLPVVLAHGQGVYLWDTAGRRYVDMMSA
                     YSAASHGHAHPRILAALEAQARRLAVPSRAYYNDRLGPFLAKLTRLTGLDMALPMNTG
                     AEAVETAIKAARRWGYGVKGVPRDRAEIIVANGNFHGRTTTIISFSSEPDYREGFGPF
                     TPGFRSVPFGDLAALEEAITPETVAVLVEPIQGEAGIVIPPAGWLSGVRRLCDAHHML
                     LILDEVQSGLGRTGAWFAFEHEKVQPDGLVLGKALGGGMLPVSAFVARRDVMNVFTPG
                     SHGSTFGGNPLAAAVGLEALQVIADEGLVERSRALGDHMLERLRAIKSPVLREVRGRG
                     LWAGAEIDPHFATARQACEALLTKGVLSKETHHTVVRLAPPLVIGHDDLDWALDRFAE
                     VIGDLERQRAPLVAA"
     gene            complement(4028..4525)
                     /locus_tag="VLJ17_09060"
     CDS             complement(4028..4525)
                     /locus_tag="VLJ17_09060"
                     /inference="COORDINATES: protein motif:HMM:NF013224.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HSV23164.1"
                     /translation="MATKRSPALDRIDVKILADLQRNGRSTMQDLAMKVGLSPRASLE
                     RVRRLEAAGIISGYRAVIDVARLTRPVNIFAEIVLAKHAQLGQVERRLAALEEVVECW
                     EVTGATDYLARFMCTDLAAYETLTTRLIDDSNLGISRIVSHVALRPIRRFAGYPESLL
                     SHKPR"
     gene            complement(4568..5362)
                     /locus_tag="VLJ17_09065"
     CDS             complement(4568..5362)
                     /locus_tag="VLJ17_09065"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008193895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HSV23165.1"
                     /translation="MQLENKVAIVSGGARGIGLAIVKRYVAEGAKVVIADIDGAAGEA
                     AAAALGSDRARFVLTDVGERRDAENVVAEARRAFGSLHILVNNAGVVHSADFLDIGEA
                     DFDRVLRTNLKGAFLVGQMAARHMVAQIKAGTPPGAIINMSSINAVVAIPNQVPYCVS
                     KGGIAQLTKVMALSLAPYGIRVNAIGPGSIMTDILKAVASDREAKRRILARTPLGRIG
                     DPQEIASIAVFLASADSSYISGQTVYADGGRLGLNYVMPVPDEATE"
BASE COUNT         1106 a         1731 c         1619 g         1013 t
ORIGIN      
        1 tgtgattgac cccgtatctg tcaaagcttt cctcgacctg agcggcaagc tcacgcgtcg
       61 gctcgagtat gagggtgcgt ggcatgcgag ctcgggcacg gccttgttcc agcttggtga
      121 gcatcggcag cacgaaggcg gctgttttgc ctgtgccggt ctgagcaatg ccgagcacgt
      181 cgcgcctggc caaaacgtgg gggatcgctt gttcctggat gggggtcgga tcagtatagc
      241 ctgcgctagc cactgccgcg aggaccttgt cggacaagcc gagatcggaa aatgacataa
      301 agccttaaaa cctcataccc ggtgctcacc accgccagag ttcgaacaaa tgcattttgt
      361 gcgaatgggc ggccaatcgt tcgagccagc cgtggccgga acataagcct gagcagcaga
      421 aagtcaatgc cgggcgttcg ataaagttgc caaaccttgc cgacgatcct acatggtctg
      481 aacaagaacg gcgttttcgt gacgagattc gccccaacgt ccggcgcacg cctcccagca
      541 actcactcaa aggtttatgc cgtggaggtg tcggataagc aagtttttgc ttaacaagtg
      601 gtggtgaaat tcgttcgtaa gcatcgctga ttgacgtgat ctcctacatg ttttcaacat
      661 tggcgccgtg atatttaggt cggcgccgcg ataatcggca tgcaccgttc gatggacaac
      721 acgtgtgaac tggcatttcg tacgcttcgc taccccgttc ctagcggcgt ccgccgttgt
      781 tgtcttgttg ccgctggcga ccgcacacgc cgaagatgcg ctatctgagc ggcccaccga
      841 tcaaatttcg gaaaccaaca aaatcgattc cgttcgcaag ccgctcgccc aagaggcgag
      901 cgttgagcga gccgtcgcgt tgcgaaagct tctcaaaacg cgggccaggg cctatgaggc
      961 ggccgacgac ttccagcgtg ccgaggttca gtacgacgac attgtagacg tcaagcccgt
     1021 cgatcccatg gtttatatcg accgaggcta tttctacatg cgccagaacc gatttagcgc
     1081 tgcagtgcgc gatttcatga cgggttcgcg cttgtcgccg acccagtcgg cgtttagcta
     1141 cggagccggc cgcgcgttgg cccgaatggg tgattatttg gcggcaattg ggcaatacgg
     1201 cgaggccata cggcttgcgc ccggcgacag cgctccggtt ctgtcgcggg cggaggccta
     1261 cattcaattg gggatgtatg tgcaagcacg cgccgacttt gaccgcgtta tcgcccttgg
     1321 actgggtcgc gacacagatc gcttcttcat ctatttcggc cgtggctatg ccaatatacg
     1381 cctcggcgag gacgaggccg ccgtccgcga tttggacgcg gcgttgtcca tgcaccccag
     1441 catggtcaat gccctggtgt ggcgcggcta cgcgcgcgag cgaatgggac aacgccagca
     1501 ggcgctctcg gactacgagc aggccctgca agtgaacccg agcgacaact ggattcgatc
     1561 gagcatcaga agggttcgca cctaggatgg gcaaaggcgg ccgaggtgtg gccgcgcccg
     1621 acgcattccg caggccgtgc caagcgcctt tgcgcacccg aggggcggtg tctatttacg
     1681 caaatccgcg gtagcgaaga ccaaagcacc cttcgatcgc gctgccgccg cactatcctc
     1741 gaccgcgccg acagccgatc gccagtccaa ccgcagggtt agacagaacg cggcgccgcc
     1801 gctgcgcaag aatgactgca gcggcgttgt catgacgcta tatccgcgct ccgcgagttg
     1861 gaggcgtaga tgttcgccgc aattcgacat cacaatggca tcgcccacgc agaccgcatt
     1921 ggtggcaaga cggcatgcgt cttccattgg gaccgcaatt cgctgcgacg gggcgacgcg
     1981 ttcgttaatg cggcttagcc cttccggcgt gaaggcggcc ggaacgaaca tgacttcgcc
     2041 gcgcgatagc gggcacaggg cggtatcgag gtggtagaat cgggggtcgg cgagctccag
     2101 ggggacagca tcgaccgcga aaacgtccct gatcggttcg ctcgcatcgc gatccgagcg
     2161 cggaccatag cccagccaga ataaattgcg cgtgcgatcc caaacgcagt cacccgcacc
     2221 ttcgagcacc aaatggctcg ggagctttac aaccgtgtcg atgagacctc gcccctgtaa
     2281 tgcccgaaat ccgctctcaa agggctcctc ctcgccgcgg cgctccggat aacgaaagcg
     2341 cgccagaacc gccttgcgat cgagcacgac cgcggcattc gccgtgaaca ccagatcggg
     2401 taggtacggc gccggcggca ccaactcgat ggcggcgcca agaccagcga gcgtgcgatg
     2461 gagcgccgcc cactcacgct gcgaggcgtc gaccaaaacc ttactttcac gcgcccaact
     2521 cgtcgggttc atccacggat tgatggcgta gtcgaccgca aaatgattgg ggcgacacat
     2581 cagaaaacgt gcagtcgttg acgtcatggc ggacgatctc ctttgccgcg atcaggcggc
     2641 taccagcggc gcccgctgcc gctccaaatc cccgatgacc tccgcaaagc ggtcgagggc
     2701 ccaatcaagg tcgtcgtgac cgatcacgag cggcggcgcc agccgaacga ccgtgtgatg
     2761 cgtttccttg gacagcacac ccttggtcag caatgcctcg caagcctgcc gcgccgtcgc
     2821 gaaatgcgga tcgatttcag cgcccgccca caggccgcgc ccgcgcacct ccctcaacac
     2881 gggactcttg atggcgcgaa gccgctcaag catatggtcg cccagcgccc ggctgcgctc
     2941 cactaatccc tcgtcggcta tgacttgaag cgcctcgagg ccgacggcag cggccagtgg
     3001 attgccgccg aacgtcgagc cgtgtgatcc gggcgtgaat acgttcatga catcgcgccg
     3061 ggccacgaat gccgataccg gcaacatgcc gccgcccaga gctttgccga gcaccaatcc
     3121 gtcaggctgc actttttcgt gttcgaatgc gaaccacgcc ccagtgcggc cgagtcccga
     3181 ttgaacttcg tcgagaatca acaacatatg atgggcgtcg cagaggcgac gcaccccgct
     3241 aagccaaccc gccggcggaa tgacgatgcc ggcttcgccc tggatgggtt cgaccagcac
     3301 cgcgaccgtc tccggcgtaa tggcctcttc cagcgctgcg agatcgccga acggaacgct
     3361 gcggaatccc ggcgtaaacg gaccgaagcc ctcccggtaa tccggttctg aggaaaacga
     3421 aatgatagtg gtagtgcggc cgtgaaagtt gccgttcgcg acaatgattt cggcacgatc
     3481 gcgcggcacc cccttgacgc catagcccca tcgtcgtgca gctttgatgg ccgtctcgac
     3541 ggcttcggct ccggtattca tgggcaacgc catatcaagg ccggtcaacc gggtcagctt
     3601 cgccagaaat ggacccaggc gatcgttgta gtaagcccgc gatggcacgg cgagccgacg
     3661 ggcctgcgcc tccagcgccg ccagaatgcg aggatgagca tggccgtggc ttgccgccga
     3721 ataggcgctc atcatatcga catagcgacg cccggctgta tcccacaaat atacaccttg
     3781 gccgtgcgcg agcacgacgg gaagcggttc gtaattgtga gcgctgtgcc ggctctcaag
     3841 ttccatcacg ttcataggta ctgctccgaa ccgcctcgat ccccttgaaa tcattataaa
     3901 cattggccac tgccagcgcg gcggaattgc cggcacctgg cggcggattc ggcggtcagc
     3961 tggtctgatt gcggcgcaaa cggccgtgcc gcgcggtctt ccagcgcgcg atggccgcaa
     4021 actgcgatca gcgcggcttg tgggacagca gagattccgg ataaccggca aagcggcgaa
     4081 ttggacggag cgcaacgtgg cttacgatcc gcgaaattcc gagattggaa tcatcgatta
     4141 atcgcgtggt taacgtttcg taggccgcca gatcggtgca catgaaccgt gccagataat
     4201 ctgtggctcc ggtaacctcc caacactcca cgacctcttc cagggccgcg agccgccgtt
     4261 ccacttggcc cagctgcgca tgcttcgcca agacaatttc cgcaaagatg ttgaccggcc
     4321 gcgttaggcg agcaacgtcg atgacggccc gataccccga gatgatcccg gccgcctcca
     4381 gtcgtcggac acgctccagg ctggcgcgcg gagacaaccc caccttcatc gccaggtcct
     4441 gcatggtcga gcgaccgttg cgctgcagat cggccagtat cttgacgtcg attcgatcca
     4501 atgcaggcga gcgcttcgta gccatcgtcc tctcgatcac ggcaacgtac gatgcgatcg
     4561 cagcgcctta ttccgtcgcc tcatccggta ccggcatcac atagttcaac ccgagtcgac
     4621 cgccatcggc atagaccgtc tgaccgctga tatagcttga gtctgcagag gcaagaaaca
     4681 ccgcgatcga agcgatctcc tgcggatccc cgatgcggcc gaggggagtg cgagcaagta
     4741 ttctccgctt cgcctcgcgg tcggaagcga ccgctttgag gatatcggtc atgatcgagc
     4801 ccggtccgat cgcattcacc ctgatgccgt aaggggcgag ggataacgcc atcaccttgg
     4861 tgagttgcgc aatcccgcct ttcgacacgc aatagggcac ctgattcggt atagccacca
     4921 cggcgttgat cgaactcata ttgatgatcg cgcccggcgg cgtgccggcc ttgatctgtg
     4981 ccaccatgtg ccgcgcggcc atctgcccaa cgagaaacgc gcccttgaga ttggtgcgca
     5041 gcacgcgatc gaaatcggct tcccctatgt cgagaaagtc ggcactatga acaactccgg
     5101 cattgttgac gaggatgtgc aaactaccga acgcgcggcg cgcctcggcc accacgtttt
     5161 cggcatcgcg ccgttcgcca acgtcggtaa ggacaaatcg agcacggtcg ctgccgagtg
     5221 cggcggcggc cgcttcgccg gccgcaccgt cgatatcggc gatgacaacc ttggcgccct
     5281 cagcgacata acgcttgacg atcgcgagcc caatgccccg cgcgcctcca ctaacgattg
     5341 cgaccttgtt ttccagttgc ataacgaatc ccggttcacg ccggcgaacc tgtcatgcgg
     5401 ccgaacaaaa gcaaagcccc ggcattccgg cattcactcc tggcggggca gcgtcggcct
     5461 ttcaacgct
//
LOCUS       DATILV010000395         1645 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3415134, whole genome shotgun sequence.
ACCESSION   DATILV010000395 DATILV010000000
VERSION     DATILV010000395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1645
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3415134"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(156..1238)
                     /locus_tag="VLJ17_09070"
     CDS             complement(156..1238)
                     /locus_tag="VLJ17_09070"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HSV23166.1"
                     /translation="MADAVAEQIAALKDEDWAIREEAATMLGTLRDPRAVAPLVSVLC
                     DGDRAVRDAAIGALLAIGEPAVTTLGVCLSDPVLTVQELASSVLATIADARVLAPLIK
                     ALASPDWIVRMHAAKALGRIQDPGAVAPLVPLLLDSVKAVREETSTALAAIGEAALSS
                     LIGALTHAEWLVRLHAVEALGKTRSSEAVDPLLSVLFNDRDRAVREDAVRALGQIGDA
                     RAVEFLVTAMKEPGLRPLAVEALGRIGDRRAVPVLINVLEGVDRPEVSRPIDGCGDRW
                     DEEILTLGAAVRALGAIRDETAIPSLMKALRHTVTRAEAADALTRFGSAVIAPLLAVL
                     ARESDDNIRYHVKETLAKVGWRAGRI"
     gene            complement(1255..>1645)
                     /locus_tag="VLJ17_09075"
     CDS             complement(1255..>1645)
                     /locus_tag="VLJ17_09075"
                     /inference="COORDINATES: protein motif:HMM:NF015114.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HSV23167.1"
                     /translation="ATALGQFRDPRVIPDLIMLLKDGILREKASAALATIGDTAIEPL
                     IAFLYDPKASEVIAEGERVLSYASVRLTAKDALRQLALETLKKMGWMPAPEDVTVNSS
                     VVDNARVDMPLGDTGRFGPSGDLAQRS"
BASE COUNT          309 a          587 c          460 g          289 t
ORIGIN      
        1 aagggatcag cacgggtgtc attccacccc tttcaccgtg cgcgttctgc gagcaaggag
       61 ggcacctggc cgctccctcc ccatccttct gaggccgcgc tttgcgcgag cacggggatc
      121 gtcccggcca ccccgcctcc tttttcagca tcctgctaaa tgcgccccgc ccgccaaccc
      181 accttagcca acgtctcttt gacatggtaa cggatgttgt catccgactc gcgtgccagc
      241 acggccagca aaggcgcaat cacggcggaa ccgaatcgag tcagagcgtc ggcggcttcc
      301 gctcgcgtca ccgtatggcg gagcgccttc atgagtgagg gtatggccgt ctcgtctcgg
      361 atcgcgccta acgctctgac agccgcgccc aatgtcagta tttcttcatc ccaccgatcg
      421 ccgcagccgt cgatcggccg cgagacctcc ggtcggtcga ccccctcaag cacgttgatc
      481 agcaccggca ccgcacgacg atcgccgatc cggcccagcg cctcaaccgc cagcggacgg
      541 agccccggtt ctttcatcgc agtcacgagg aactccacag cgcgcgcatc gccgatctga
      601 ccaagcgcgc ggactgcatc ctcgcgaacc gccctgtccc gatcgttgaa cagtaccgac
      661 agcagggggt ccacagcctc agacgaccgc gttttcccca aggcctccac cgcatgcagc
      721 cgcaccagcc attcggcatg ggtcaacgcg ccgatcagcg acgatagcgc cgcctcccca
      781 atggccgcga gagccgtcga cgtttcttcg cgcacggcct taaccgaatc tagtaagagc
      841 ggcaccagcg gcgccaccgc tcctgggtct tgaatccgac ccagcgcctt ggccgcatgc
      901 atccgtacga tccagtcggg actcgcgagc gccttgatga gcggcgcgag cacccgcgca
      961 tcggcaatgg tcgccaacac cgacgaggcc aattcctgaa ccgtaagcac cggatcggaa
     1021 aggcagacgc ccagcgtcgt cacagccggc tctccgatgg ccaggagtgc gccgatcgcc
     1081 gcatcgcgaa cagcgcgatc gccgtcacaa agtacagaga ccaacggcgc cacagccctg
     1141 gggtcccgaa gcgtgccaag catcgtggcg gcctcttcgc gaatcgccca atcctcgtct
     1201 ttgagagcag cgatctgttc ggctactgcg tcagccatat tttcctgtag cctgctagct
     1261 cctttgggcg agatctcccg acgggccaaa tcggcctgtg tcgccaagag gcatgtccac
     1321 cctggcgttg tcgaccacgc tcgaattgac ggtgacgtct tccggcgccg gcatccaccc
     1381 catttttttg agtgtttcaa gcgccaattg ccgcaaagca tctttcgccg tgagtcggac
     1441 cgacgcatag gagagcaccc gctccccttc tgcgatgact tcggacgcct tcgggtcata
     1501 tagaaaggca atcaacggct cgatcgccgt atcgccgata gtggccaggg cggcactggc
     1561 cttttcgcgc aggatgccgt ccttcaacag catgatcaag tcgggaatga cgcgcggatc
     1621 acggaactgg ccgagcgccg tcgcc
//
LOCUS       DATILV010000396         1760 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_349052, whole genome shotgun sequence.
ACCESSION   DATILV010000396 DATILV010000000
VERSION     DATILV010000396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1760)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1760)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1760
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_349052"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            84..341
                     /locus_tag="VLJ17_09080"
     CDS             84..341
                     /locus_tag="VLJ17_09080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23168.1"
                     /translation="MVTLYLAAPDGSPEQVLPSFKAARDVGARITIHVGVGPGGRSGL
                     LEKLNAEHALGPDTTHIAAPSTTPNGSFIHDTGGTVSIAGF"
     gene            421..852
                     /locus_tag="VLJ17_09085"
     CDS             421..852
                     /locus_tag="VLJ17_09085"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV23169.1"
                     /translation="MISSARCAWCSRCRNARCGNAATPATRTHRPFLTVREALEFATI
                     EGARANGLDRKIGTLTPGKEADIILLRTDRLNVMPINNAVGAVVTNMGPQNVDTVLIA
                     GKVVKRDGQMLGLDFARLQRLGDEAPRDRVYAAAKVRNSRI"
     gene            complement(871..1413)
                     /locus_tag="VLJ17_09090"
     CDS             complement(871..1413)
                     /locus_tag="VLJ17_09090"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSV23170.1"
                     /translation="MKFLSLIGALAIIVAVAAAVFFFGGFYNVAATQPDLGIVAWTLE
                     YVRDASINRHAVDQPPISMEDPATIQAGARAFASRGCTSCHGGPGVMWAKFSEGLRPD
                     PPDLKDTVKDLTHAQIFWVIRNGINMTGMPGFNLVEAPDQEIWTITAFVKNLPNVSEE
                     DYKAWTADAAPLAGGAASPK"
BASE COUNT          360 a          543 c          541 g          316 t
ORIGIN      
        1 ggcgctattg ggagatcgcc ggatcgaaat tccctgggga cattgcgcgt ctgcgcaaac
       61 agtagttctc cagcgatgat cagttggtga cgctttatct cgccgcgccg gacggctccc
      121 ccgagcaggt tttgccctcc ttcaaggcgg cgcgcgacgt gggcgcccgc atcaccatcc
      181 atgtcggcgt gggccccggc ggacgcagcg gcttgctgga aaagctgaac gccgagcatg
      241 cactcggccc cgataccacg cacattgctg caccctcaac gacaccgaat gggagcttta
      301 tccacgatac cggcggcacc gtctcgattg ccggcttctg atgggccacg gcattccgcc
      361 gatccagaaa gcgatcgaca cgagcatccg cccgagcctc tcggtcgacg tcggtgccga
      421 atgatttctt cagccagatg cgcatggtgt tctcgttgca gaaacgcgag gtgtgggaac
      481 gccgccacgc cggcgacaag aacccaccgg cccttcctca cggtccgcga ggcgctggaa
      541 tttgccacca tcgaaggcgc ccgggcaaac ggccttgacc gcaagatcgg cacgctcaca
      601 cccggcaagg aggccgacat cattctgctg cgcaccgacc gcctcaatgt catgccgatc
      661 aacaacgcgg tcggcgccgt ggtgaccaat atgggccccc aaaacgtcga cactgtgctg
      721 atcgccggca aggttgtgaa gcgtgatgga cagatgctcg gcctcgattt cgcccggctt
      781 cagcgcctgg gcgacgaggc cccccgcgac cgcgtctacg ccgccgcgaa ggtcaggaac
      841 agccggattt gaataagcta gagcggaccg ctatttcgga gatgcggctc cgccagcgag
      901 cggagctgca tctgcggtcc aagccttgta atcctcctcc gaaacgttgg ggaggttctt
      961 gacgaaggcg gtaatcgtcc agatttcctg gtcgggggct tcgacgagat tgaaacccgg
     1021 catgccggtc atattgatgc cgttgcggat cacccagaag atctgcgcgt gcgtgaggtc
     1081 cttgacggta tccttgagat cgggggggtc gggacgcaga ccctcggaga attttgccca
     1141 catgacgccg ggaccgccgt ggcagctcgt gcagccgcgc gacgcgaagg cacgggcacc
     1201 agcctggatc gtggccggat cttccatcga gatcggcggc tggtccaccg catgccgatt
     1261 gatcgaggcg tcgcgcacat actccaacgt ccaggcgaca atgccaaggt cgggttgggt
     1321 cgcggcgaca ttatagaagc caccgaaaaa gaacacggct gctgccaccg caacaatgat
     1381 ggcgagagcg ccgatcaggc tgagaaattt catggcgaac ctcggatttt cggaagcggt
     1441 ttccggttcg gaccggaagc ctgcggcggg tggctattgc attctcgtgc ggcgaagcta
     1501 tggccggcgc cgtccgagta agccctggat cgcactggaa tcatcgaacc gggaattgcg
     1561 aatcatagca aagagcaatt ccttcgggga ggcccacccc gccggtcgag agaatttcca
     1621 actatcaagt tttattcccg gcgcgcgata tccttgaagc ggctccaaaa aaacggctcg
     1681 ccgcaaacgc atattatggc cgtcaataga gcgtgaatgg cttggatatc ggcattaagc
     1741 gaggccagag cgtccgcacc
//
LOCUS       DATILV010000397         3387 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3930184, whole genome shotgun sequence.
ACCESSION   DATILV010000397 DATILV010000000
VERSION     DATILV010000397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3387)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3387)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3387
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3930184"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..676
                     /locus_tag="VLJ17_09095"
     CDS             <1..676
                     /locus_tag="VLJ17_09095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018242460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV23171.1"
                     /translation="GGDWGTPISSAMARQGAAGLLGIHINLPATVPPEVAAALAGGPL
                     PAGLSEKERAVVEALMTSGKNGNLAYFTMMTARPQTVGYGATDSPAGLAAWVLVHPGF
                     AHWTYGADSEKSPTKEDVLDNITLYWLTNTATSAARLYWENGARGSVVVAAAQKTNEI
                     SLPVAITVFPEDVYRPPETWARRAYRNLIYFHEVDKGGHFAAWEQPELFSAEVRAAFR
                     SLRKSI"
     gene            892..1043
                     /locus_tag="VLJ17_09100"
                     /pseudo
     CDS             892..1043
                     /locus_tag="VLJ17_09100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009026035.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="epoxide hydrolase N-terminal domain-containing
                     protein"
     gene            1149..1580
                     /locus_tag="VLJ17_09105"
     CDS             1149..1580
                     /locus_tag="VLJ17_09105"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HSV23172.1"
                     /translation="MADTDHVQLSRLVTEHAWRVDNGRADTVYELYVDEGVLDVGTPL
                     CGRQAIHAWGRQLVDAPPWRSIRHVCSNMRFVASGPDAAEGSTLMTVFMVAGPGDATT
                     LPWNVGEDHDRFVRTADGWKLVSRRWVNLFTRGDVIDLPRQ"
     gene            1596..1754
                     /locus_tag="VLJ17_09110"
     CDS             1596..1754
                     /locus_tag="VLJ17_09110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23173.1"
                     /translation="MKTTQIIAVAAYDRWKQRRRTKEMPAALDIDIPNDASAVVGTDE
                     IVASLFAL"
     gene            1806..2921
                     /locus_tag="VLJ17_09115"
     CDS             1806..2921
                     /locus_tag="VLJ17_09115"
                     /inference="COORDINATES: protein motif:HMM:NF037020.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HSV23174.1"
                     /translation="MKTNRLLVAAVLAIAIGAPIAGFVVDMTGQPMTSTGIRVPFLHW
                     LPAGPIANQAELASLERANEWLNSPPLTATALRGKVVLIDFWTYTCINWRRTLPYVRA
                     WAEKYKDQGLVVIGVHAPEFSFEKNINNVRWAVKAMQIDYPVAMDSELVIWRAFRNQY
                     WPALYFIDSQGRVRHYYFGEGSYEQSEMIIQALLAEAGISGIDRQPVSVDAQGVEAAA
                     DWRSLMSPENYVGYERTQNFASPGGAAPDKPRVYELPALLRLNEWALSGDWTVKTEAA
                     VLNKASGMIAYRFHARDLHLVMGPAAPGTSVRFRVRIDGRPPGAAHGVDVDDQGNGTV
                     VEQRLYQLIRQSMPIADRQFEIEFIDPGVATYAFTFG"
     gene            complement(3156..>3387)
                     /gene="tnpA"
                     /locus_tag="VLJ17_09120"
     CDS             complement(3156..>3387)
                     /gene="tnpA"
                     /locus_tag="VLJ17_09120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001278583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HSV23175.1"
                     /translation="LTKLVNSLKGVSSRRMRQMHPTLRPRYRKGVLWSPSYFAASCGG
                     APISIIRQYIERQRNPQSDSYRANAPRRISPA"
BASE COUNT          710 a          954 c         1064 g          659 t
ORIGIN      
        1 gggcggcgac tggggcacgc cgatctccag tgcgatggcg cgccagggag ccgcggggtt
       61 gctcggcatc cacatcaact tgccggcgac ggtaccgccc gaagtggccg cggcactcgc
      121 cggtgggccc ctgccggcgg gactctccga aaaagaacgc gcggtggtcg aagcgctcat
      181 gacatccggg aagaacggaa acctggcgta cttcacgatg atgaccgcgc ggcctcagac
      241 ggtcggctac ggcgcaacgg actctccggc cggcctcgcg gcgtgggtcc ttgtgcatcc
      301 aggtttcgcg cactggacat acggtgccga ttccgaaaag tcgccgacga aagaggatgt
      361 gctggacaac atcaccctgt actggctgac caacaccgcg acctcggcgg cgcggctata
      421 ctgggagaat ggcgcacgag gcagcgtcgt tgttgcagcc gcacagaaga ccaacgagat
      481 atcactcccg gtcgccatca cggtatttcc ggaagacgtc tatcgccccc cggagacatg
      541 ggcgcgacgc gcctatcgca atctgatcta cttccacgag gtggataagg gcgggcactt
      601 cgccgcctgg gaacagccgg agctgtttag cgccgaggtc cgggccgcgt tccgatcgct
      661 gcgcaaatcg atctgaaatc tgtggcgcgc gcctgtggtg cgcgccatga atgtctgtct
      721 gcagttgtgc gaccacagcg agggacgcga cgtctgcaaa ttcgtcaacg cggcgggacg
      781 ttcttgccag ctcagcagct ggtggccgtt ctaatggctg cggactttgc aggcgcagca
      841 atggcagcac aacgtgtcac ttccgcatcg atgtaccgga agggcaatca actccgccgg
      901 cgcatcgttg cgacccggtg gcctaaacgg gaaacggtca cagatgaatc gcaggacgtg
      961 ccgcttgcaa cgatgcagga gctcgcgcgc tattgggtga cagaatacga ctgcgcaaat
     1021 gcgaggcgaa actgaaagcc ttgcggctga gcccgtaaag gaagaatgtc atgtgtgcga
     1081 caccgcggac gcgttgagag gttcacgagg ccgataaaga tgggcacttc gctgcgtcgg
     1141 agcaactcgt ggccgacacc gatcacgtgc agctcagtcg gcttgtaaca gagcacgcat
     1201 ggagagttga taacggccgt gccgacacgg tctacgagtt atacgtagac gagggtgtgc
     1261 tcgacgtggg gacgcctttg tgtggacgcc aggcgataca tgcatggggt cggcaactcg
     1321 tcgacgctcc accctggcga tccattcgcc acgtctgcag caacatgcgc ttcgttgcca
     1381 gcggccccga cgcggcagaa ggcagcaccc tgatgacagt cttcatggtg gcggggccgg
     1441 gagacgcgac gacgctgccg tggaatgtgg gcgaggatca cgaccgattc gtgcgcactg
     1501 cagatggatg gaagttggta tcgagacgct gggtcaacct gttcacgcga ggtgacgtca
     1561 ttgacctccc gaggcaatga tgactggggg ctcacatgaa aacgacacaa atcatagcag
     1621 tagcagcata cgatcgctgg aaacagagac ggcggactaa ggagatgccc gccgctctcg
     1681 acatcgatat cccgaacgac gccagtgccg ttgttggcac ggacgagatc gtggcgtcgc
     1741 tctttgctct ctaacgacgg cgtgcgcgca tgacaacatc gctcggaagg tgaaggacgt
     1801 tgacgatgaa aacaaacaga ctcttggtag ccgcagttct cgccatcgca atcggggcac
     1861 cgattgcggg atttgtagtg gatatgacgg ggcagccgat gacatctacc ggaatacggg
     1921 ttccattcct tcactggctt cctgctggcc cgattgccaa tcaagccgag ctggcttctc
     1981 tcgagcgcgc gaacgaatgg ctcaattcgc cgccccttac ggcgacagct ttgcgcggaa
     2041 aggtcgttct gattgatttt tggacctaca cctgcatcaa ctggcggcgc acacttccct
     2101 atgtccgcgc ctgggcggag aaatacaagg atcagggact agtggtgatt ggcgtccatg
     2161 caccggagtt ctcatttgaa aaaaacataa ataacgtccg ttgggccgtg aaagcgatgc
     2221 agatcgatta tccggtcgca atggacagcg agcttgtcat atggcgcgcc tttaggaacc
     2281 aatattggcc ggcgctgtat ttcatcgatt cgcagggacg tgttcgacat tattattttg
     2341 gagaaggctc atacgagcaa tcggaaatga tcattcaagc gttgctggcc gaggcaggaa
     2401 ttagcggtat cgaccgtcaa ccggtgtcgg tcgatgccca aggtgttgag gcggccgccg
     2461 attggcgcag cctgatgtct ccggaaaatt atgtcgggta tgagcgcacc cagaactttg
     2521 cgtcgcccgg cggagcggcc ccggataaac ctcgcgtcta tgaactgccc gcgctgttgc
     2581 gcctgaatga atgggcgctc tccggcgatt ggacggtgaa gacggaagcc gccgtactga
     2641 acaaggccag tggaatgatc gcgtaccgtt ttcacgcccg cgatcttcat ctcgtcatgg
     2701 gcccggcagc accaggaacg tccgtgagat ttcgcgtacg gattgatgga cggccgccgg
     2761 gcgccgctca cggagttgat gttgacgacc aaggcaatgg cacggttgtg gaacagagat
     2821 tgtaccagtt gatccggcaa tccatgccca tcgctgatcg gcagttcgaa attgagttta
     2881 tcgatccagg cgtggcgacc tatgcgttca cgttcggcta gctgcttgct cagggtcctt
     2941 gctgcgcccg attcttccca ctttgtcgga agcacggaca tgtccggctg acagcgatca
     3001 cctgaacaag catcggttgg gacacgcagc gtccgctgac tggcgttgcg caatgcgcga
     3061 gcgctcgcgc aatatcgcgc aagcgaacca tccgaacata ttgcggctgc gcacccgcac
     3121 tgaccaagac ttttagcgca gcaagctctg gggtttcacg ccggagatat gcgccgaggc
     3181 gcgttggccc gatatgagtc tgattgcggg tttctctgcc gttcgatgta ttggcgaatg
     3241 atgctaatgg gcgcaccgcc acaggatgca gcaaaatagc ttggcgacca cagaacgcct
     3301 ttgcggtatc gcggccgcaa ggtcgggtgc atttggcgca tgcggcggct cgacacgccc
     3361 ttgaggctgt tgacaagttt tgtgaga
//
LOCUS       DATILV010000398         3536 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_349626, whole genome shotgun sequence.
ACCESSION   DATILV010000398 DATILV010000000
VERSION     DATILV010000398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3536
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_349626"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..291
                     /locus_tag="VLJ17_09125"
     CDS             <1..291
                     /locus_tag="VLJ17_09125"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF013206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HSV23176.1"
                     /translation="AHFQPMGHAHLVTNLVDYRMDVQAAIDSPRVFYEDEVTIVERGI
                     SAATIEGLRQRGHQVIVRERPWGGAQSIAIDWRRGVLVGASDGRKDGCAIGY"
     gene            complement(506..826)
                     /locus_tag="VLJ17_09130"
     CDS             complement(506..826)
                     /locus_tag="VLJ17_09130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23177.1"
                     /translation="MVPVRKVGSATGVGSGGACGRDQASEVAAAPVQRALVRIAPEPP
                     AVSLRPADGRATAPFLAHLIATVQGDPQTRVRRRTDPNWATTTYATMMQKPASAGRTF
                     RENR"
     gene            complement(920..1507)
                     /gene="phaR"
                     /locus_tag="VLJ17_09135"
     CDS             complement(920..1507)
                     /gene="phaR"
                     /locus_tag="VLJ17_09135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoate synthesis repressor PhaR"
                     /protein_id="HSV23178.1"
                     /translation="MAKPEEPIVIKKYANRRLYNTGTSTYVTLEDLAGMVKTGEDFVV
                     YDAKSGEDITRSVLTQIIFEQENKAGQNLLPITFLRQLIRFYGDSMQMLVPRYLEVSI
                     ESLTREQEKFRQQMSQAFGVGPFAPLEDQVRRNMEMFERAFAMFAPFARREAQANEAE
                     KPAGSGSGSGGEIDDLKRQLDDVQKRLDRLSETKG"
     gene            1646..2821
                     /locus_tag="VLJ17_09140"
     CDS             1646..2821
                     /locus_tag="VLJ17_09140"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HSV23179.1"
                     /translation="MKDDIVIVGAARTPVGSFNGAFASLPAHELGQIAIKAVLDRAGI
                     EAPRVSEVIMGQILTAGEGQNPARQASIAAGIPVESPAWAVNQLCGSGLRAVALGYQA
                     ILNGDSDIVVAGGQESMSMAPHCAHMRGGVKMGNFEMIDTMIKDGLWDAFNGYHMGNT
                     AENVARQWQITRQQQDELAVGSQNRAEAAQKAGRFKAEIAPVTVKARKGDIVVDADEY
                     PKHGTTLDAISKLRPAFAKDGTVTAANASGINDGAAAVVLMKASDAAKENRKVLARIV
                     SWAHVGVDPAIMGTGPIPASRAALKKAGWTVGDLDLIEANEAFAAQACAVNKDLGWDT
                     SKVNVNGGAIALGHPIGASGARVLVTLLHEMEKRNAKKGLATLCIGGGMGIAMCLER"
BASE COUNT          752 a         1012 c         1092 g          680 t
ORIGIN      
        1 gcgcacttcc agcccatggg ccacgcccac ctggtcacca atctggtcga ctaccgcatg
       61 gatgtgcagg ccgcgatcga ctcgccgcgc gtattttacg aggatgaggt caccattgtg
      121 gagcgcggga tttccgcagc gacgattgaa ggattgaggc agcgcggcca tcaggtaata
      181 gtgcgggagc ggccctgggg cggtgcccag agcatcgcca tcgattggcg gcgcggggtg
      241 cttgtcggcg cctcggacgg ccgcaaggac ggctgcgcga tcgggtatta aagaactcta
      301 cgggctgctt tggatcctct ccatagcctc tgctcgcaag agccgcgtga aaccggcctc
      361 gaagaagcag gaaccgaacc gcattggccg cttgcttggg tgaaggggcc ggtagcgccg
      421 ccaaatccgc tgcgagccgg aggaacggca aacgcggcgg ccggccgcga aaaatggctc
      481 ccgcgtgaat ttattgcaaa cgcagttatc ggttttcgcg aaacgtccgc cccgccgatg
      541 ctggtttttg catcattgtc gcgtaggtcg tggtggccca atttgggtca gtacgcctgc
      601 gcacccgcgt ctgggggtcg ccttggacag tagcaatgag atgggccagg aacggcgctg
      661 tggcgcgacc gtcggcgggg cggagcgaaa cggccggagg ttccggcgcg atccgtacca
      721 aggcacgttg cacgggcgct gcagcgacct ctgaggcctg gtcgcgaccg cacgcgccgc
      781 cggaaccgac acctgtggcg gaaccgactt tgcggaccgg caccattaac atcctcctgt
      841 ctcaaatcgg gacacgtccc gaagctttag gagggaactg caactgccat gccgaccgat
      901 ctccgcccgg gagttgccct cagcccttcg tttcgctcaa acgatcaagc cgtttttgca
      961 cgtcgtcgag ctggcgcttg agatcatcga tttcgccacc cgaacccgaa cccgaacccg
     1021 ccggcttttc cgcctcatta gcctgggcct ctcgccgcgc aaacggcgcg aacatcgcaa
     1081 aagcgcgctc gaacatttcc atgttccgcc gcacctggtc ctccaacggg gcgaacgggc
     1141 cgacgccgaa cgcttggctc atctgctggc gaaacttctc ctgctcgcgg gtgagcgact
     1201 cgatcgagac ttcgagatag cgcggcacca gcatctgcat gctgtcgccg taaaagcgga
     1261 tgagctggcg caagaacgta atgggcagaa ggttctggcc agccttgttc tcctgctcga
     1321 agatgatttg ggtgaggacc gaccgggtga tgtcctcacc ggacttggca tcgtacacga
     1381 cgaaatcttc gccggtcttg accataccgg cgaggtcctc caacgtgacg taagtgctgg
     1441 tcccggtgtt gtagagccgc cgattggcgt atttttttat gacgatgggc tcttcgggct
     1501 tggccatgtt tttcattgct ctacgataag gagtgagtct gcgtcaaaaa tatgccgttt
     1561 tgtcacgtcg ggccactgtt tttgtggcga cccatgacct atctgcggca catggccgga
     1621 accctaccgt gaaggagctt ttgtgatgaa ggacgacatc gtcatcgttg gggcggcgcg
     1681 cacgccagtc ggatcattta atggcgcatt cgccagcctg ccggctcacg aactcggcca
     1741 gatcgccatt aaggcggtcc tggaccgcgc tggtatcgag gccccgcgag tgtcggaggt
     1801 aatcatgggc cagatcctga cggccggcga ggggcaaaac ccggctcgcc aggcctcgat
     1861 cgccgccggt atcccggttg aaagtccggc ctgggctgtt aaccagctgt gcggctcggg
     1921 tctgcgtgca gtggcgctag gctaccaggc gatcctcaac ggtgattccg acatcgtggt
     1981 cgccggtggc caagaatcga tgagcatggc accgcactgt gcccacatgc gcggcggcgt
     2041 gaagatgggc aacttcgaaa tgatcgacac catgatcaag gatggcctgt gggacgcctt
     2101 caacggctat cacatgggca acaccgccga gaacgtcgcc cgacaatggc agatcacccg
     2161 ccagcagcag gacgaattgg cggtaggctc gcagaacagg gccgaagcgg cacagaaggc
     2221 cggtcggttc aaagccgaga tcgcgcccgt gaccgtcaag gcacgcaagg gtgacatcgt
     2281 tgtcgatgcc gacgaatatc ccaagcacgg taccacgctc gatgcgatca gcaagctgcg
     2341 ccctgccttt gctaaggacg gcaccgtgac ggctgccaat gcctcgggca tcaacgacgg
     2401 cgccgccgct gtggtgttaa tgaaagcgag cgatgccgca aaggaaaacc gcaaggtgct
     2461 ggcccgcatc gtgtcctggg cgcatgtggg cgtcgatccg gccatcatgg gtaccggccc
     2521 gatcccggct tcccgtgcag ctctcaagaa ggccggctgg acggtcggcg atctcgatct
     2581 catcgaggca aatgaggcgt tcgccgccca ggcttgcgcc gtcaacaagg acctcggctg
     2641 ggacaccagt aaggtcaatg tcaatggcgg cgcgatcgcg ctcggccatc cgatcggtgc
     2701 gtccggcgca cgcgttctgg tcacgctgct ccacgaaatg gagaagcgta acgccaagaa
     2761 gggccttgct acgctgtgca ttggcggcgg catgggcatc gccatgtgcc tcgagcgctg
     2821 atgccaaaaa taattagcaa tatcaattag ttatcttggg tgtcgtctct cgactagacc
     2881 ctgagtagac tacagatctt agctcgcgct gccatcggta gtataacatc ctatcgatgc
     2941 aaccaggcta ttggtatgag cgtacgggga gatagtcgca tggctcggcg agctatagtc
     3001 aaacgagcgg ggttcaagac cttagtcagc caccacccga cgaaagctga cgccggtgcg
     3061 agcccgccac ctcgcgatcg cgcgaattcc ctgcaataca gcctggcatg agctgatcgt
     3121 tggaggtgag gtgatggcaa atgccaggca ggaaggcggt tcgtatcgta acgaggtgat
     3181 taccgggcag tgacggcggc gacgatggac cgccgagata tccatgcgga gctgtcagaa
     3241 ctagagaaga aactagatgg ataccatata cccgaaatag agagtagtcc tagcctagat
     3301 aaggaagata agtttgcgac cttaaacggt catccgatga gtgattcaga tatttatcct
     3361 ggggaacaga ctcaagaacc attcgaatag atagaagata atacggggag taaatagcga
     3421 tgatgctgct agttttgttg aatctgctcg tgatattcat aatgatcggc ataattcact
     3481 gctgcagaaa aagcagctac gagaaactat gagccgacaa catgtaatgg gaaagt
//
LOCUS       DATILV010000399         5934 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2396736, whole genome shotgun sequence.
ACCESSION   DATILV010000399 DATILV010000000
VERSION     DATILV010000399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5934)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5934)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5934
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2396736"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            549..1298
                     /locus_tag="VLJ17_09145"
     CDS             549..1298
                     /locus_tag="VLJ17_09145"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HSV23180.1"
                     /translation="MKIQRVMAVMIGIVLPLLGTGAQAAELKVYSSTAVKAVLEELGP
                     QFEKATGDKLVFTFGLSSAVKKQIDEGAAFDVAVLTPALIDGLAAGKIDPASRVAIAR
                     AGSGVAVPAGSPKPDVSTAEALKRTLLQAKSIGFTGVGVSRAGNEALLAKLGIADQVK
                     PKIKLLNESAPAAVAKGEVEIGLGPMSEVQLVPGVQLAGPYPADLQSYLVFMACVSSA
                     SKNADAARSLIKFLTAPAAAPVFKAKDMEPG"
     gene            1863..3563
                     /gene="ade"
                     /locus_tag="VLJ17_09150"
     CDS             1863..3563
                     /gene="ade"
                     /locus_tag="VLJ17_09150"
                     /EC_number="3.5.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020091958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000034 - adenine deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0006168 - adenine salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenine deaminase"
                     /protein_id="HSV23181.1"
                     /translation="MREILERRIDQAMGRMAADLVVRNARILDLATGVFHSGDIAICG
                     EMIVGTGDSYRGVREIDAGGRIAVPGFIDSHVHCESTLVVPSEFDRCVLTHGTTTAIC
                     DPHEICNVLGMAGLRYFLDSALGTAMDLRVQLSSCVPATPLETSGARLGAADLVAYRD
                     HPKVIGLAEFMNVPGVLNKDPDCLDKLAAFQGAHIDGHAPLLSGRSLNAYLACGVRNC
                     HETTSLEEGREKLSKGMQVLIREGTASQDLAALVPLIDEFTSPFLGFCTDDRNPLDIH
                     EEGHIDHLVRRAIALGAPVAAVYRTASWSAARGFGLRDRGLVAPGYLADILLLDDLAS
                     CAVHLVLRRGRPVTEQTFDDRVLPPPPAGNSVRLGGVTAQTFAVPARGPSTPVIGIIP
                     GKILTQRLQADLPFRGGERHADPTRDLLKVCVLERHGRNGNVGRGFVKGFGLERGALA
                     SSVGHDSHNICVLGASDEDMALAVNRVIELAGGFVAARDGQVIAELALPIAGLMSGSS
                     AEVVRPAVATLRDAVRAMGCPLAGPLLQLSFLPLPVIPHLKITDRGLVDVDRFELIDP
                     "
     gene            complement(3954..5078)
                     /locus_tag="VLJ17_09155"
     CDS             complement(3954..5078)
                     /locus_tag="VLJ17_09155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23182.1"
                     /translation="MTKMQLGDRDDLSAQIRDYDTCFAEFLKPSGNGQKILQAILLRE
                     AFSRFALQGVAIKENAPTVILDVSCGPGDYSVAWTSQIAKLLAKGVAFYCTDYRDGIY
                     RETGETYAMTTAKKMQAAAENGKLRLAQAPVATDADLFSGHDALMPPGKTADIVHWSH
                     SGYHVRDALGADRNDPGTIEAGLRAAVNKMWAALDQMGLMVSVHETRDNSDGVSSQIG
                     PVSRKYCGRLDDVPEQIAACIGQLGGFVAAVNFVSPLKLLGLNDAGWARLKRPAQWNR
                     LNELEARALRLLNFIAFDFSDPAKSALETLAEDGRLAAYVDEYKSIVATNGGYIVVKC
                     AFQMISKSLQVARKLDDIAFQLTEKMHDFSEEMAAEMRGS"
     gene            complement(5220..5606)
                     /locus_tag="VLJ17_09160"
     CDS             complement(5220..5606)
                     /locus_tag="VLJ17_09160"
                     /inference="COORDINATES: protein motif:HMM:NF013979.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvoyl-dependent arginine decarboxylase"
                     /protein_id="HSV23183.1"
                     /translation="MTHVPQSNAHVLDQGCGRPSHALTAFEFALRDADIEQQNLVYVS
                     SILPPRCEVVAREAGVELLRPGDITFCVLARSETSEFGRHVYASLGLARPADPEMYGY
                     ISELHGYGITRHSLGARFALGRTTDR"
BASE COUNT         1135 a         1821 c         1769 g         1209 t
ORIGIN      
        1 ttattttcat ttctgccctc cgaacattaa atagactata gcggaagtgg gcggacgcgg
       61 tcaacgaagt tctattcgcc tcgtcggtcg tttgccaacc aacgcattga tatgtcgttg
      121 cggttatggc cgatgcttac aagggggaac ggcagcttcg ggtcgaacct ccccgttccg
      181 ggtcgagggc cggaaggtct ggaatcggcg ctacgccgcc gctcccggat gcttcagcaa
      241 gggtcggctg acggatccga aaccggccgc tcgggacggt cgctgggcct tctcctcgtg
      301 cccctaagca gccgctcgtt gccggtaacc gcagtgggga gaaatgtcgg gactcggagg
      361 ccggctgacc cgacatgacg gcggtcggcg tatcggcaac aatcgcgaca tatcggggta
      421 gacccggacc gtatcgtttt cacggaagcc tctggcacac tgaggattgt cgccaagctg
      481 tttgccttca tttcggtgat actccccggc gcttgatcga aagcgctgtt ctatcgtggg
      541 agagcctctt gaagattcag cgtgtcatgg cggttatgat cggaattgtc ctgccgttgc
      601 tcgggactgg agcgcaagcg gcagagctca aggtctactc atccaccgca gtgaaggcgg
      661 tccttgaaga actcggcccg caatttgaga aggcgacagg cgacaagctt gtcttcactt
      721 tcggcctgtc gtcggcagtg aagaagcaaa tcgacgaagg tgccgcgttc gacgttgccg
      781 tcttgacgcc ggccttgatc gacggcctcg cggcgggcaa gatcgatccg gcaagccgcg
      841 tcgcgatcgc gcgcgccggg tccggggtcg cggtgcccgc cggctcgccg aagcccgatg
      901 tcagcacggc ggaggcactc aagcggacgc tcttgcaggc aaaatcgatc ggcttcaccg
      961 gcgtcggcgt cagccgcgcc ggcaacgaag ccttattggc caagcttggc atcgccgatc
     1021 aagtgaagcc gaagatcaag ctgctgaacg agtccgctcc ggccgcggtt gccaagggag
     1081 aggttgaaat cggtctgggt ccgatgagcg aggttcagct cgttcccggc gtccagcttg
     1141 ccggacccta tccggccgac ttgcagtcct acctggtttt catggcgtgc gtgtcgagcg
     1201 ccagcaagaa tgccgacgcg gcgagatcgc tgatcaaatt tctgaccgcg cctgccgctg
     1261 cgcctgtctt caaagccaaa gacatggagc caggatgatc aaggccacaa tcgcgagcgg
     1321 ccagaaaccc gggcgatgag gtgactgccc gcgacgagcg cctcagcaat agcggcccgg
     1381 gcctgcgttt caattggcta cgtgggcgac cgctttcggc gcatccttcc cgttcccgct
     1441 cgctccggcg gcggtcggct gactgaacgg acaccggccg ttcagtccgg tcggcgggaa
     1501 tcggtcgaag tgccccttag ctgacaattg accacaggag gccgagtctc cgcttatgag
     1561 ggtgcatcag ttaccgcggc ccgtcaggtt acggaactgc cgctgggccc gccgcggact
     1621 caaagtcagg taccgcctga cgagctgatc tccgcacgtc tcgaaggcgt gcacggggga
     1681 tcgccgccgg aacaatccgt gtttacaaca cacaagatgg ttccctgagt ctccgagaga
     1741 agatgccagc ttttgctatt ataagaccgc ggccggatcg ctaaaaataa gattcgctgc
     1801 agccgattgg cggattcggc cgcgtgcagt cggccaggat gtcgacaaaa agcggagagg
     1861 gcatgcgaga gatcctggaa cgtcggatcg atcaagccat gggccgcatg gcagcggacc
     1921 tggtcgtgcg caacgcacgc atcctcgatc ttgcgaccgg tgtgttccat tctggtgata
     1981 tcgcgatctg cggtgagatg atcgtgggca ccggcgacag ctaccgcgga gtgcgcgaaa
     2041 tcgacgccgg cggccgcatc gcggttccgg gtttcatcga cagccacgtg cattgcgaaa
     2101 gcacgctcgt cgtccccagc gagttcgacc gctgcgtgct gacccatggc acgaccacgg
     2161 cgatctgcga tccgcacgag atctgtaacg tgctcggcat ggccggcctg cgctattttc
     2221 tcgacagcgc gctcggcact gcgatggatc tgcgcgtgca gctctcctcc tgcgtgccgg
     2281 cgacaccgct cgaaacttct ggcgcccggc tcggcgcagc cgaccttgtg gcctaccgcg
     2341 atcatccgaa ggtgatcggg ctcgccgagt tcatgaacgt gccgggcgtg ctgaacaagg
     2401 accccgattg cctcgacaag ctggcggcgt tccagggcgc gcatatcgat ggccacgcgc
     2461 cgttgctgtc cggccgatct ctgaatgcct atcttgcctg cggcgtgcgc aactgccacg
     2521 agactaccag tctcgaggaa ggccgcgaaa agctttcgaa gggcatgcag gtgctgatcc
     2581 gcgaggggac ggcctcccag gatctcgcgg cgctggtccc gctgatcgac gagttcactt
     2641 cgccttttct cggcttctgc accgacgacc gcaacccctt ggacattcac gaggaaggac
     2701 acatagatca tctggtgcgg cgggcgatcg cgctcggcgc gcccgtggcc gcggtctatc
     2761 gcactgcgag ctggtcggcg gcccgaggct ttggactgcg cgatcgcggc ctcgtggcgc
     2821 ccggctatct cgccgacatc ctgctgctcg acgatcttgc atcctgcgcg gtgcatctgg
     2881 tgctgcgacg tggtcgaccg gttacggagc agacgttcga cgatcgtgtc ctgccaccac
     2941 cgccggccgg caattcggtg cggctgggcg gcgtgacagc acagaccttc gcggttcctg
     3001 cgcgcggccc atccacgccg gtgatcggca tcattccggg gaagatcctt acccagcgtc
     3061 tgcaagctga cctgccgttt cgcggcggcg agcggcatgc cgatccgacg cgcgatctct
     3121 taaaggtgtg cgtgctggag cggcacgggc gcaatggcaa tgtcggccgc ggctttgtca
     3181 aaggctttgg tctggagcga ggggccttgg cttcgtcggt cgggcacgac agccacaata
     3241 tctgcgtcct cggcgcaagc gacgaggaca tggcgcttgc ggtgaaccgc gtcatcgagc
     3301 tggccggcgg ctttgtagcg gcccgcgacg gccaggtgat agccgaactc gccttgccga
     3361 ttgccggttt gatgagcggc tcgtcggccg aagtggtccg ccctgcggtc gccaccctga
     3421 gggacgcggt tcgcgcgatg ggctgcccgc ttgccggccc cttgctgcag ctctcgtttc
     3481 tgccgctgcc ggttatcccg catctaaaga tcaccgaccg tgggctggtc gatgtcgatc
     3541 gctttgagct gatcgatccg tagcaacttc ggtcgcgaaa tccgctttca gacagcgcaa
     3601 cccctcgacg gctataatcg ggagatctgc aatcaaatcc ttggtgcccg gctcggaggt
     3661 cgacttccaa ccgaagatcg gagaccaagg ccctaaccgc cgcggcgaaa accgccgcct
     3721 atctcgatgc ggtgaatttc aacttaagac gtgctacgcg cgggggtgta caatgatata
     3781 acgcgctatc tgaagcctcg ccgggcgcga attattgtgg atgccgggtg acgcgcggcg
     3841 gtaactgaag tggagcgtcg gcggagaggc agcgggaatc ggaccctcta tccctcattg
     3901 cgtctggcgc gtgcagctac cgatcttctc gccggtcacc ttatacaccg atgttatgat
     3961 ccgcgcatct cggcggccat ttcctcagaa aaatcgtgca tcttttcagt taattgaaat
     4021 gcgatgtcgt ccagcttcct cgccacttgt agcgatttac tgatcatttg aaaggcgcac
     4081 tttaccacga tgtagccgcc attcgttgcg acaatcgatt tatattcgtc gacataggca
     4141 gctaaccgac catcctctgc aagggtttcg agcgccgatt tggcaggatc ggagaaatca
     4201 aaagcaatga aattcagtaa ccgcaaagcc cgggcttcca actcattgag ccgattccat
     4261 tgagccgggc gtttcagtcg cgcccagccc gcatcgttca gtcccagaag cttgagcggg
     4321 ctgacaaaat taactgcagc tacaaatccg cccaattggc cgatgcatgc agcgatctgc
     4381 tcgggcacat catccaacct tccgcaatat ttccgagaga cagggcctat ttgcgacgaa
     4441 acaccatcag agttgtctcg cgtttcgtgg accgagacca tcaaacccat ttggtcaagc
     4501 gctgcccaca tcttattgac ggctgcacgc aaacccgctt cgatcgtccc tggatcattc
     4561 ctgtctgcac cgagcgcgtc gcgcacatgg tatccgctgt gcgaccaatg gacgatgtcg
     4621 gctgttttgc cgggcggcat aagcgcatcg tggccagaaa acaaatcggc atctgtagca
     4681 accggcgcct gcgccaatct cagttttcca ttttctgccg cggcttgcat tttctttgcg
     4741 gtcgtcatcg catacgtttc acccgtttct ctgtaaatgc catcgcgata atccgtgcaa
     4801 taaaatgcta caccctttgc taagagcttc gcgatttgtg atgtccaggc gacactgtaa
     4861 tcaccgggcc cgcaacttac gtccagtatc actgtcggcg cgttttcctt tattgctaca
     4921 ccctgcagcg caaaacggct gaacgcctcg cgcagcaaaa tcgcctgcaa gattttttgg
     4981 ccgttgcccg aaggtttcaa gaactccgca aagcaggtgt cgtaatctcg tatttgagca
     5041 gataaatcgt cgcgatcacc gagttgcatc ttggtcaccc cgagaatgac ttacgcaccg
     5101 cgcggtgctg cacttcgacc ccgaatttgg cggattgatt tgatcatgtc taccgcgcat
     5161 cggaaggttc gtgtaacagg cttgacgtta ttaacccaag acgatcggtg tgccgcgggt
     5221 cagcgatctg tagttcgacc caaagcgaaa cgtgcgccca acgaatgacg ggttatgccg
     5281 tatccgtgca gctccgatat atacccgtac atctccggat ccgccggtct ggccaaaccg
     5341 aggctggcgt aaacatggcg cccgaattca ctggtctctg accgggccaa cacgcagaag
     5401 gtgatatccc caggtctgag cagctcgacc cctgcttcgc gggcgacaac ctcacagcgc
     5461 ggagggagaa tggacgacac ataaaccagg ttttgctgct cgatatccgc gtcgcgcaag
     5521 gcgaactcga aggcggtgag ggcatgcgat ggacgcccac acccttggtc aagaacatgc
     5581 gcgttggact ggggaacatg tgtcaccttc ctttatatgc cggcgtgaca gcggctcttg
     5641 ggcctcggtc ccagagcccg actgccttcg aggcggcatc ggcaatacct ggagcgacct
     5701 tccaacctac ccccgatccg ccggtatata ggggatcaag cctttcgcga acgcgatctc
     5761 ctggacttcc ccggcatctc gcgcgaatgg acaagaaggc ctttgacctc tgccatccac
     5821 accaacgggt tctggccgac ggtgctcggc aaaatccacg ccgggtctat gcggtgcata
     5881 aacaacgcgt ccgatacgac gcgcgccttt cccgctggcc gtgctctggc caat
//
LOCUS       DATILV010000400         3111 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4694683, whole genome shotgun sequence.
ACCESSION   DATILV010000400 DATILV010000000
VERSION     DATILV010000400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3111)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3111)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3111
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4694683"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            365..811
                     /locus_tag="VLJ17_09165"
     CDS             365..811
                     /locus_tag="VLJ17_09165"
                     /inference="COORDINATES: protein motif:HMM:NF028509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HSV23184.1"
                     /translation="MKFAGFLAALTALAISTIALSADRATRDEAKAYCTKAAAHYRDI
                     GAVKAFADFQTPAWRDRDLYVLGVSNDGIQVVHGANPAMVGRNVIDMRDVDGKLTNRE
                     MLAVKEEGWVEYQWHNPASGSIEAKATYVIRVSPDTILAVGAYKPN"
     gene            878..2635
                     /locus_tag="VLJ17_09170"
     CDS             878..2635
                     /locus_tag="VLJ17_09170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012041272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSV23185.1"
                     /translation="MPKIRIKDLPIAIKSLLAPAAGALITISIVVVVTLVNSGAIETA
                     RRADEAEKLASAVSAARLDFAQGSAALFRALTWRLNKVEASRIAAARNEAEGAIARGT
                     DLVQKLVVAERDRARVEALAKQVIAYKTAAQQTSEMIQDDPPMATMFINDAYERSVGV
                     AAAFQEFSAELAARAGELRARASENLQQGIMVIIAVAGGGILFALGIAIVSARYISRP
                     ITVLTSAVSRLAAGDLNASIPNEDRNDEIGAMTRSVIVLKRNTTEMRRLETEQKETEA
                     RTIAEKQAVAEREAAERKVADQRAAAERKGAMHKLADEFEKAVGHIIASVSSASAELE
                     AAAHRLTKTAETTQQLSGMVASASEVASANVQSVASAAEEMTGSVGEISRQVHESSKI
                     AGEAVNQAQKTNVRISELSQAAGRIGDVIKLITSVAEQTNLLALNATIEAARAGAAGR
                     GFAVVAQEVKALAGQTAKATEEIGVQIAGMQTATQDSVAAIKEIDGTITRISGIAATI
                     AAAVEEQGAATQEISRNVQEAAKGTAEVATNITDVNRGASETGSASTQVLASAQSLAK
                     ESTALKHEVAKFLDTVRAA"
BASE COUNT          661 a          929 c          974 g          547 t
ORIGIN      
        1 tatgaacgcc cgtatgggct gcaagcggca ggtcgtatct acccgaaaaa aatattcgac
       61 ggtatgcggg ccgtcatccg aaaccctgaa caaaaccgga ctcgccagat tcgttaacga
      121 atagccgcga cttacccggt ctctgtcgag atgcggttta tgccggctga aagacagcag
      181 cgcgcggatc cggtgacggc cgcacgcccc tgcacaagtc gcgccggtgc ttccattagc
      241 gcaggcgcga aatctaccga aggtatcaag cgcaatatct acgcattaat actcattcat
      301 ttctttacga aggattcatg atcgactgcc actttgaacc aattcagatt gttggagaaa
      361 tcccatgaaa ttcgccggtt ttcttgcggc gctcacggcg ctcgccatct cgactatcgc
      421 tctgtccgcc gatcgcgcaa cccgcgacga ggcaaaagcg tactgcacga aggcggccgc
      481 acactaccgc gacatcggcg cggtaaaagc tttcgccgac ttccagacgc cagcatggcg
      541 cgatcgcgac ctctatgtgc tcggagtcag caacgacgga atccaggtgg ttcacggcgc
      601 caatccggcg atggtcggtc gcaacgtcat cgacatgcgg gacgtggatg gaaaactgac
      661 caaccgtgaa atgcttgcgg tcaaggagga gggatgggtc gagtaccaat ggcataatcc
      721 cgcttccggt tcaatcgagg ccaaggctac gtatgtgatc cgtgtcagcc ccgacacaat
      781 tcttgccgtc ggcgcctaca agccgaatta aggcggtctc tttgttatcg cgatcggggg
      841 gcgtcccgac ttgccgcctc aggacacgag cgggaccatg ccgaagattc gcatcaaaga
      901 cctgccgatc gccatcaaat ctctgcttgc gccggccgcc ggggccttga tcacaatctc
      961 gatcgtggtc gtcgtcacgt tggtcaacag cggcgcaatc gaaacggccc gccgggccga
     1021 cgaagcggag aaacttgcga gcgcggtgag cgcggcgcgg ttggattttg cgcagggctc
     1081 tgcggcgctg tttcgtgcat tgacctggcg tttgaacaaa gtggaggcga gtcggatcgc
     1141 tgcggcgcgt aacgaggccg aaggggcgat cgcccgcggc acggacctgg tgcaaaagct
     1201 cgtggtcgcc gaacgtgacc gcgcgcgcgt ggaggcgctg gcgaagcagg tgatcgcgta
     1261 caagacggcc gcgcagcaga cgtccgagat gattcaggac gatcccccca tggcgaccat
     1321 gttcatcaac gacgcgtatg agcgttcggt cggcgtcgcc gcggcattcc aggaattttc
     1381 ggctgaactg gcagctagag ccggcgagct tcgcgcccgg gcgtcagaaa atctgcagca
     1441 aggcattatg gtgatcatag ccgtggccgg cggcggtatc ctgttcgccc tgggaattgc
     1501 catagtttcc gctcgctata tctcccgccc gatcacggta ttaacctcgg cggtctcccg
     1561 acttgccgcc ggcgacctga acgcatcgat accgaacgaa gaccgtaacg acgagattgg
     1621 cgcgatgacc cgttcggtga ttgtgctcaa gcgaaatacg acggagatgc gacggttgga
     1681 aaccgagcag aaggaaacgg aggcgcgtac catcgccgag aaacaggcgg tcgcggaacg
     1741 cgaggccgcc gagaggaagg tcgcggatca gcgtgccgcg gccgagcgca agggggcgat
     1801 gcacaagctt gccgacgagt ttgagaaagc ggttggccat attatcgcta gcgtttcctc
     1861 ggcctcggcc gaactggaag ccgcggccca caggctgacc aagactgccg agaccaccca
     1921 gcaactttcc ggcatggtcg cttcggcctc cgaagtagcc tctgcgaacg tgcaatcggt
     1981 agcgtctgcg gccgaggaga tgaccggatc ggtcggcgag atcagccgtc aggttcacga
     2041 atcaagcaag atcgccggcg aggcggtcaa tcaggcgcaa aagaccaatg ttcgtatctc
     2101 cgagttgtcg caggcggctg gccgcatcgg cgatgtgatc aagctgatca cgtcggtggc
     2161 cgagcagacc aacctcttgg cgctcaacgc caccatagaa gctgcccgcg ccggcgccgc
     2221 ggggcgcggg ttcgccgtcg tcgcacagga ggtcaaggcg ctcgccgggc agacagcaaa
     2281 ggcgaccgag gagattggcg ttcagattgc cggcatgcag acggcgaccc aggattcggt
     2341 cgcggcgatc aaagagattg acggaaccat tacgcgcatc tccggtattg cggcaaccat
     2401 tgcggctgcg gtcgaggagc agggtgctgc tacccaggaa atctcccgga acgtgcagga
     2461 ggcggccaag ggaaccgccg aggtcgcgac caatattacc gatgtcaatc gcggtgcctc
     2521 ggagaccggt tcagcttcca cccaggtgct cgcgtcggcg caatcgctcg ctaaggagag
     2581 caccgcgctc aaacacgagg tcgccaagtt cctcgatacg gtccgcgctg cgtaacgaga
     2641 gcaccagcac ggactgtttc cacgcgcggc gccgggaggc attcgccgat cacgtcatcg
     2701 cggagcgcgg cgtgcgccgc ggccatatcg cctatctgcc ggcggacatc ggtgcacatc
     2761 cacatgaggg cgatcgcaac caccgccatg atcatgctct tagccatagc aagaagcgtt
     2821 aagcggagtc tgctagctgg gtctcctatg gcaagcgtga aacttccgca acgggtcaat
     2881 tacgccagat cagcggctcg gatgccatgt ccgtacgacc ccaaactgcg gctgcgccgc
     2941 tgcggtgtag cgaactggcg tcgcgggcca actgcggact tatgcacctc aacaaacacc
     3001 gtcctattcg atcacttctt cggcgaggag caggaagggt tcggggatcg agagtccgag
     3061 ggccttggag tgctagaata agtctgattc agctgcgatc gcagcccggt c
//
LOCUS       DATILV010000401         5917 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3930964, whole genome shotgun sequence.
ACCESSION   DATILV010000401 DATILV010000000
VERSION     DATILV010000401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5917
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3930964"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(45..1007)
                     /locus_tag="VLJ17_09175"
     CDS             complement(45..1007)
                     /locus_tag="VLJ17_09175"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV23186.1"
                     /translation="MTRRWFVALALLASSIASTAPAAEWPNRPIRIVAPSTPGGAADT
                     FARLLAEFLPPLLHQPLIVDNRAGGGGLIGAAAAAHAEPDGYTLVTASIAYHAIAPAV
                     SPNPGFDPIRDFTHIAFLGGPPNVFVVHPALGVHSLKELIALARSGRPIDYVSPGVGT
                     LGHLLVESFAQKAGIAVQHIPHKGSSQAMMDLVAGNVMIGSMTWSSAAGQVRAGTVVP
                     IVVSSSARIAELPDVPTLREEGFDDLVAVTWYALSGPAGLPDDVVQKLNRAVNAAWAT
                     PALRWRLADDAITAEPMSPQAVTLFVANEVRKWGPIAKRVVANP"
     gene            complement(1109..1387)
                     /locus_tag="VLJ17_09180"
     CDS             complement(1109..1387)
                     /locus_tag="VLJ17_09180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23187.1"
                     /translation="MRPLNLAKRSKETGTKCPHCVDLIPPSDGFSDGVEEEIIQFLES
                     RPGAFDLTGEIANGDAFIRYCFEHAQDAEAFHARFAPAAEKAISKRAT"
     gene            complement(1784..3091)
                     /gene="pncB"
                     /locus_tag="VLJ17_09185"
     CDS             complement(1784..3091)
                     /gene="pncB"
                     /locus_tag="VLJ17_09185"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008127644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004516 - nicotinate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0019358 - nicotinate nucleotide salvage
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HSV23188.1"
                     /translation="MTISTEIAKRVYDHTFKLDPIVRSLLDTDFYKLMMLQMIWGLYR
                     DVEVTFSLINRTTRVRVADEIDERELRDQLDHARTLRFTKKEMIWLAGNSFYGRAHIF
                     DAKFLAWLADFQLPEYELRRADGQYELHFNGTWTHTTMWEIPALAILNELRSRAALRH
                     YGRFTLDVLYARAKAKLWAKVERLRQLPVLRISDFGTRRRHGFLWQRWCVEALKEGLG
                     EAFIGTSNVLLAMDNDLEAIGTNAHELPMVLAALASDDEELRRAPYQVLSDWQRYYGG
                     NLLIVLPDTFGTKAFLRGAPNWIADWTGFRPDSAPPISGGEEIIAWWIQKGRDPRDKL
                     LVFSDALDADTIVATHRHFAGKARMSFGWGTNLTNDFDGCAPQPDDGLRAISLVCKVT
                     AADGRPAVKLSDNPQKATGTPEEIARYLRVFGGEGRVEREVVV"
     gene            3415..4431
                     /locus_tag="VLJ17_09190"
     CDS             3415..4431
                     /locus_tag="VLJ17_09190"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HSV23189.1"
                     /translation="MKKLLLAATALTFGAVAGIAAAQAADVPMPWAYGFAGPPPNPMP
                     PPTPPAGPPQLDNTVQHTLPGSKASFTRAQIANRYGPADWYPEDHPGMPDIVAKGRES
                     ATPTIFACGLCHYPNGKGRPENANVTGLTYDYIVQQLTDFKNGARKTSDPRKGNTGLM
                     AGFAKAMTDDEIKDAAKYFAAIPATPWIKVEEVDTVPKTRPAGGIFLPITGAEAGTEP
                     IGARIIETPVNVDDTELRRNPRSGFIAYVPPGSVKKGEALVTTGSGKTTACTACHGLD
                     LKGLGPVPTIAGRSPSYVARQLYDMQHGNRAGSWTPLMAPVVSKLSEDDMLNAAAYLA
                     SLNP"
     gene            complement(4736..5053)
                     /locus_tag="VLJ17_09195"
     CDS             complement(4736..5053)
                     /locus_tag="VLJ17_09195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23190.1"
                     /translation="MSFVDVPTEIDISKPIAVVSGGSLNPDNAPKWYVNIKSAEWKTA
                     PQLRVGTQVALLRAFWGVVWPIPMKSSTGYLAIGSSCVRRRDHFQWKRHIHGNQTLMA
                     ART"
     gene            5218..5892
                     /locus_tag="VLJ17_09200"
     CDS             5218..5892
                     /locus_tag="VLJ17_09200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lectin"
                     /protein_id="HSV23191.1"
                     /translation="MKQTARLTILASAAILLAWSAGAQAQQANMSFFVTSTGAGKGAD
                     LGGLAGADARCQQLAQSAGAGAKTWHAYLSTQAANGQSAVNARDRIGNGPWQNAKGVV
                     IAKNLDELHSLTNNLTKQTALTEKGDLVKGRGDTPNEHDALTGSTMEGRAFPAGEDRT
                     CKNWTSSTQGAAMLGHIDRQGLQDTVEAKSWNASHPSRGSEGGCSQADLKSTGGAGLF
                     YCFAAN"
BASE COUNT         1194 a         1881 c         1814 g         1028 t
ORIGIN      
        1 agcaagcgga cgcaccgcct cttctggcgc gcggaagcgc gagcctatgg gttggccaca
       61 acgcgctttg cgatcgggcc ccacttgcgc acttcgttcg caacgaacaa cgtcacggcc
      121 tgcggcgaca tcggctcggc cgtaatcgcg tcgtcggcga gccgccacct caaggcgggc
      181 gtcgcccatg cagcgttgac cgcacgattg agcttctgca cgacgtcatc cggcaagccg
      241 gccggtcccg acagggcata ccaggtgacc gccacgaggt cgtcgaaccc ttcctcccgc
      301 agcgtcggca cgtcgggaag ttccgcgatg cgggcgctcg acgacaccac gatcggaacc
      361 acggtgccgg cgcggacctg cccggccgcc gagctccacg tcatcgagcc gatcatcaca
      421 ttgccggcga cgagatccat catggcctgg gacgaaccct tatggggaat gtgctgcacc
      481 gcgatcccgg ctttctgggc gaacgattcc accagcaagt ggccgagagt gccgacgccc
      541 ggcgacacgt agtcgatggg gcgcccgctc cgcgccagcg cgatcagctc cttgagcgaa
      601 tgcaccccga gcgcgggatg caccacaaat acgttgggcg gtccgcccag aaaggcgatg
      661 tgcgtaaagt cgcggatcgg atcgaagccc ggattggggc tcacggccgg cgcgatggca
      721 tgatacgcaa tgctcgcggt caccagggtg tagccgtccg gctccgcatg ggccgccgcg
      781 gcggccccga tcagcccgcc gccgccggcg cgattgtcga cgatgagcgg ctgatgcagc
      841 agcggcggca gaaattccgc aagcagccgg gcaaacgtgt ccgccgcccc gccgggcgtg
      901 gacggcgcga cgatcctaat gggccggttc ggccattcgg ctgcgggcgc ggtcgacgca
      961 atcgaggagg ccaatagcgc aagtgcgacg aaccaacgtc tagtcatcag cctcacctta
     1021 attggcaggc agtcgcagca atcgtatata gcacggcgca gcttctccct ctctgcgctt
     1081 gcgggaaaaa acgcgcctca gaagcaactc atgtcgctct tttagagatc gccttttcgg
     1141 cagccggtgc aaaccgggcg tgaaaggcct cggcgtcttg tgcgtgttcg aagcagtagc
     1201 gaatgaacgc atcaccgttg gcgatctctc cggtcaagtc gaaggcaccg ggacggcttt
     1261 cgagaaactg aataatttcc tcttcaacgc catccgaaaa gccatctgac ggcgggatga
     1321 ggtcgacgca atgcgggcac ttggtaccgg tttccttgct ccgtttcgca aggttcaggg
     1381 gcctcatgcg ggcgcatccg ggttgacttt cattccctgt tgttcactat ttgttctcat
     1441 gagtcaagag cagatattca tcacgggata tgcagacttc ggcttctccg gatcgccgca
     1501 ggagttgagc cgttaggtca acaccgcaga cgggcgacgc tggtgacatg gtcgcaggac
     1561 acctgcccac cgatgcgggg cgaggactgc ctggaaggtc ggcggcgccc tttacaagat
     1621 tcttaattgc gtgaagagcc ctgagcagcg tggcgtaaca tgcgccgcaa gacggactgc
     1681 ccgaatggag agtagccctc agtgacgctt aggagtcatg cccctggggc acgcaaacgc
     1741 cgcaaccatt tttgttgatc gccgctgttt tgaattgccg ccctcacacc accacctcac
     1801 gctccaccct gccctccccg ccgaacaccc gcagatagcg tgcgatctcc tccggcgttc
     1861 cggtcgcctt ttgcggattg tccgagagct tcacggcagg gcgaccgtcg gcggcagtga
     1921 ccttgcagac cagggagatg gcgcgcaggc cgtcgtcggg ctgcggcgcg cagccgtcga
     1981 aatcgttggt caagttggtg ccccagccaa agctcatgcg tgccttgccg gcgaaatgcc
     2041 ggtgggtcgc cacgatggtg tcggcatcga gcgcgtcaga aaataccaga agcttgtcgc
     2101 gggggtcgcg gcccttctgt atccaccacg cgatgatttc ctccccgccc gatatcggcg
     2161 gggccgaatc cggccgaaag ccggtccagt cggcgatcca gttcggcgcg ccgcgcagga
     2221 acgccttggt gccgaaggtg tcaggcagca cgatcaggag attccccccg tagtagcgct
     2281 gccagtcgga gagcacctgg tagggcgccc gccgcagctc ctcgtcgtcg ctagcgagcg
     2341 ccgcgagcac catgggcaat tcatgggcgt tagtgccgat cgcctcgaga tcgttgtcca
     2401 tggcgagcag cacgttgctg gtgccgatga aggcctcgcc gagcccttcc ttgagtgcct
     2461 ccacgcacca gcgctgccac agaaagccgt gccgccgccg ggtgccgaaa tcggaaatgc
     2521 gcaacaccgg cagttggcgc agccgctcca ccttcgccca cagcttagcc ttggcgcgcg
     2581 cgtagagcac gtcaagcgta aagcgtccgt aatgccgcag cgccgcccgc gagcgcaact
     2641 cgttgaggat ggcgagcgcc ggaatctccc acatggtggt atgggtccag gtcccgttga
     2701 agtgcagctc atactggccg tcggcgcgac gaagttcgta ttcgggcagc tggaaatccg
     2761 cgagccaggc gaggaatttc gcatcaaaga tgtgagcgcg gccgtagaag ctgttgccgg
     2821 caagccagat catctctttc ttggtgaagc gcagcgtgcg ggcgtggtcg agctggtcgc
     2881 gcagttcacg ctcgtcgatc tcgtcggcga cgcgcacccg cgtggtgcgg ttgatgagcg
     2941 aaaacgtaac ctcgacatcg cggtacaggc cccagatcat ttggagcatc atcagcttgt
     3001 agaaatcggt gtcgagcagg ctgcggacga tcggatcgag cttgaaggtg tgatcgtaga
     3061 cccgctttgc gatttcggtc gagattgtca cgatggccgc cctctgacgc ccgcgcgtag
     3121 tggcgcgtag gacgggttga gctcttacga aacccatggg agacgcccgc ggaacgactg
     3181 ccgatgggtt tgtggagttt gtcatcgggc cggccaaagg ccggacacgg tggctcaacc
     3241 catcctacgt cgtatcacaa acccgaaccc agacaatatc ggcgttgcgc ggctttgttc
     3301 ggccttaacg gcagcacctt ccaaacgcca caccaagctg gtaatctgat tgttgcgatt
     3361 tttgcaccgg agattccggg cacatcggaa accaagatca ggaaggggga aacgatgaaa
     3421 aagttgttgt tagccgcaac tgctttgacg ttcggcgccg tcgccggcat tgccgccgcg
     3481 caggccgccg acgtgccgat gccatgggct tatggcttcg cgggaccgcc gccaaacccg
     3541 atgccgccgc cgaccccgcc ggcgggtccg ccgcaactgg acaacactgt gcagcatact
     3601 ttgccgggat ccaaagcatc tttcacccgg gcgcagatcg ccaaccgcta cggtccggct
     3661 gactggtacc cggaggacca tccgggcatg ccggacatcg ttgccaaagg ccgcgagtcc
     3721 gcaaccccga ccatcttcgc ttgcggcctg tgtcactatc ccaacggcaa ggggcgcccg
     3781 gagaacgcca acgtcaccgg tctgacctat gattacatcg tacagcagct gacggacttc
     3841 aaaaacggcg ccaggaaaac ttcggatccc agaaagggca acaccggttt gatggccgga
     3901 tttgccaagg cgatgacgga cgatgaaatc aaagacgccg ccaaatactt cgcggcgatc
     3961 cccgccacgc cttggatcaa ggtggaggag gtcgataccg tgccgaagac caggcccgcc
     4021 ggcgggatat tcctcccgat cacaggtgct gaggccggca cggaaccgat cggtgcgcgc
     4081 atcatcgaga cgcctgtcaa cgttgacgac accgagcttc ggcgcaaccc gcggtctggc
     4141 ttcattgctt atgttccgcc cggcagcgtc aagaagggtg aagccctggt cacgaccggg
     4201 agcggcaaga ccaccgcatg cacggcctgc cacggactcg atctcaaggg gctaggcccg
     4261 gtgccgacga ttgccggccg gtcgccgagc tatgtcgcgc ggcaactcta cgacatgcag
     4321 cacggcaacc gggccggaag ctggacgccg ctgatggctc cagtggtcag caagctctct
     4381 gaagacgaca tgttgaacgc cgcagcctac ctcgcctcgc tgaacccata aacgcgagct
     4441 cttctggcac acggccgggc agcggaaatc gctgcccggc cgatttgatt cgcttcgccg
     4501 aaatctgctg aaggttcaca cccggggatc ggtgatccgc gtggaggcaa agccgggccc
     4561 aagaatctta acaagaatca ctaatcaaga atcagatttc aagaatcaga tatcaggcga
     4621 acactcgaga agttccttca aacgtgccaa atccttgcga ttggccttac gcatcgccgc
     4681 agacatgaaa ggcgccatca atcgaatccc gacggttcgc ctcgattgcg cagagtcatg
     4741 tgcgtgccgc catcagcgtt tgatttccat gaatatgtcg tttccattgg aaatggtccc
     4801 tccgccgcac gcatgacgaa ccgatcgcca ggtacccagt cgacgatttc ataggtatag
     4861 gccagacgac gccccagaaa gcacgcaaca acgccacctg cgttccgaca cgcaactgcg
     4921 gcgcggtctt ccattctgcc gatttgatat tcacgtacca cttgggtgca ttatcggggt
     4981 ttagagagcc ccctgaaaca accgcgatgg gcttggaaat atcgatctca gtgggaacat
     5041 cgacgaacga catgcgactg ccccgcgacg gattgtcatg cggtcagcat agcagagttg
     5101 caggagctgc ctgcgtcggc gttcgaagcg ttacgcgcgc gtcgcgattt cgtgctaagc
     5161 gaagcgcgcg gcaaaggccg cgtcgactat tgagacaatc accgggagag actgaaaatg
     5221 aagcagaccg cacgtttaac cattctggca tcggccgcga tcctgctcgc ctggtcggcg
     5281 ggcgcacagg ctcagcaggc caacatgagc ttcttcgtca ccagcactgg cgcgggcaag
     5341 ggcgcggacc tgggcggtct tgcgggcgct gatgcgcgtt gccaacagct cgcccaatct
     5401 gctggcgccg gcgcgaagac ctggcacgcc tatctcagca cccaagccgc caatggccag
     5461 tcggccgtca atgcacgtga ccgcatcggc aacgggccgt ggcagaacgc caagggcgtg
     5521 gtgatcgcca agaacctcga cgagctgcac agcctgacca acaacctcac caagcagacc
     5581 gcgctcaccg aaaagggcga cttggtcaaa ggccgcggcg acacgcccaa tgagcacgac
     5641 gccctcactg gctcgaccat ggaaggccgc gcgttcccgg ccggagagga ccgtacctgc
     5701 aagaattgga cgagcagcac ccagggcgcc gctatgctgg gccatatcga ccgccagggc
     5761 ctccaagaca cggtcgaagc caaatcctgg aacgcctcac acccatcgcg cggatctgaa
     5821 ggcggctgta gccaggcgga cctcaagagc accggcggcg ccggcctgtt ctattgcttt
     5881 gctgctaact gagcggcaat ccggttgcct ggattcg
//
LOCUS       DATILV010000402         4816 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3416408, whole genome shotgun sequence.
ACCESSION   DATILV010000402 DATILV010000000
VERSION     DATILV010000402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4816)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4816
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3416408"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(311..1822)
                     /locus_tag="VLJ17_09205"
     CDS             complement(311..1822)
                     /locus_tag="VLJ17_09205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006610122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HSV23192.1"
                     /translation="MEEIFNLFHGFAVVLQPFNLLVMLCGILLGVMIGVLPGLGGANG
                     VAILLPLTFSMSPTSAIIMLSCIYWGALFGGAITSVLFNIPGEPWSVATTFDGHPMAQ
                     QGRAGEALTAAFTSSFVGALFAVVVITFVAPLVALFALQFGPAEKFAVFFLAFCSFIG
                     MGKEPPFKTVASMMIGFALAAVGLDGVTGQLRLTFGFTELLNGFDFLIAVIGLFGIGE
                     ILLTMEEGLSFKGRAAGINPKVVLQTWAELPRYWITSLRSCLIGCWMGISPAGATPAS
                     FMSYGIAKRTSRRGDNFGNGEIEGVIAPETAAHAAGTSALLPMLALGVPGSPTAAVLL
                     GGLLIWGLQPGPLLFVEQKEFVWGLIASMYLGNLVGLAVVLTCVPLFAAILRVPFSII
                     APIILVLCAIGAYSVHNSTFDVVMMLVFGVVGYVMKKCNYPLAPMVLAIVLGDRAEEA
                     FRQSLLGSQGSVAVFWSNGLVGSIMVLGLIALSWPLIQEGLTRLRARLPQRVL"
     gene            complement(1838..2332)
                     /locus_tag="VLJ17_09210"
     CDS             complement(1838..2332)
                     /locus_tag="VLJ17_09210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HSV23193.1"
                     /translation="MSDRGRGGGPRQRAVEIGVSLFTALFGAIVVVGSLQVGVGWGVE
                     GPRSGFFPFYIGLLIIVSSAVNLLQIRLTDRRPRFAEWGQLRQVLDVLVPTAIYVVAI
                     PYLGIYVVSAALIAWFMSWLGKYRWSLTAAISIGTPIVIYLTFEKWFLVPLPKGPLEE
                     ILHL"
     gene            complement(2390..3412)
                     /locus_tag="VLJ17_09215"
     CDS             complement(2390..3412)
                     /locus_tag="VLJ17_09215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011442308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSV23194.1"
                     /translation="MKNTGRNAVALAAAVLSAAALSAGSVSTTQAAWEPSRPVEIIVP
                     AGTGGGADQMARVVQGIVTKHNLMKQSMVVINKPGGAGGEGFLDVKGSRGNPHKLVIT
                     LSNLFTTPLATGVPFNWRDLTPVAMVALDEFILWVNADTPYQDAQGYIAAVKAAPPGQ
                     FKMGGTGSKQEDQIIAVAIEKVTGTKFTYIPYKGGGEVAVQLVGKHVDSTVNNPIEAM
                     AQWRAGSVRPLCVFDTKTIPYTDKIGDKAWSDIPTCKSVGLDVEYLMLRGFFMAPGVT
                     DEQTAYYVDLLKKVREAPEWTNLMKDGAFNQSFMTGAEFTKWLGGEEERHRALMKEAG
                     FLGATQ"
     gene            complement(3426..3578)
                     /locus_tag="VLJ17_09220"
     CDS             complement(3426..3578)
                     /locus_tag="VLJ17_09220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23195.1"
                     /translation="MYTANEGANDLTVVLLFSALGLVLSLAVISMMPADAMSWAIAHL
                     EVTAGH"
     gene            complement(3867..4481)
                     /locus_tag="VLJ17_09225"
     CDS             complement(3867..4481)
                     /locus_tag="VLJ17_09225"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV23196.1"
                     /translation="MAGPTVFVIDDQESVRHALGEMLSVFGFSVETYESADSFLRAIE
                     QPRAGCVVADVRMPGTDGIELVCELGRRKVTLPVVLISGHADIPMAVAAIRSGAEDFI
                     EKPIDDAKLVAAINRALARTFEQQDLRKSHQAVDVMFARLTPRQVEIFDLVVQGFTSH
                     AIAARLNIGVRTVEGYRAEIMEKMQAGSVAILVRQAIRLGRINP"
     gene            complement(4484..>4816)
                     /locus_tag="VLJ17_09230"
     CDS             complement(4484..>4816)
                     /locus_tag="VLJ17_09230"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV23197.1"
                     /translation="QVVLNLIRNAIESILGARQMDGRIQVVARRLAAPQRIEIGVSDS
                     GPGVGDELAERLFHPLTTSKYEGFGLGLPICASIVEAHGGRVWLHARQAGATEFRFSL
                     PLEQSQAM"
BASE COUNT         1074 a         1514 c         1373 g          855 t
ORIGIN      
        1 tcaccgtcat cgagaacagt ggatttctgc cctcccctat cgatcggctg aacgaactgg
       61 agcggcagaa gcgcgaatca gaggcgtatc tcaaggacgg ttccgaggat ctgcccgaca
      121 tacatcccgc tattgccgag acataccgga tccgggcggc tcacccaggc gctcgccgtg
      181 acgtcccgcg gcgtgctcaa ggtcgtgagc gtgggaagag attcagcgaa acctcatcgt
      241 tgcgaaaatg catcggcacg accaaatccc gagacgcaat cagtgacttt tgggtgcctg
      301 aggcgccact tcataggacc cgctgcggga ggcgagcacg caagcgtgtc aatccctcct
      361 ggatcagagg ccaggacagc gcaattagtc caagcaccat aatgctgccg acgagcccat
      421 tcgaccagaa gacggcgacg ctgccctgcg agccgagcag cgactggcga aacgcctcct
      481 ccgctcggtc tcccagcacg atcgccaaaa ccatcggcgc cagcgggtaa ttgcacttct
      541 tcatcacata gccgacaacg ccgaaaacca gcatcatgac aacgtcgaag gtggagttgt
      601 gtacgctgta ggcgccgata gcgcagagca ccaagatgat cggtgcgatg atgctgaaag
      661 gaacgcgcag gatcgcggca aacagcggaa cacaggtcag caccaccgca agcccgacga
      721 ggttgccgag atacatgctg gcaatcaagc cccagacaaa ttccttctgt tcgacgaaca
      781 gcagcgggcc cggctgcaag ccccagatca atagccctcc gagcagcacc gccgctgtag
      841 gagagccagg cacgccgagc gcgagcatcg gaagcaacgc cgaggtgcca gctgcatgcg
      901 ccgcggtctc aggcgcaatc acaccctcga tctcgccgtt gccaaaatta tcgccgcgcc
      961 gcgatgtgcg cttggcaatt ccgtagctca tgaaggaagc cggagtcgcg cccgctggcg
     1021 agattcccat ccagcagccg atcaggcagg agcgcaacga cgtgatccaa tagcgcggca
     1081 gctccgccca agtctgcagc acgaccttgg gattgatgcc agcggcgcga cccttgaagc
     1141 tcagcccttc ttccatggtg aggaggattt cgccgatccc gaacaagcct ataacggcga
     1201 tcaggaaatc aaagccatta agcaattccg taaacccgaa ggtcagccgt agctggccgg
     1261 tgacgccgtc gagcccaacc gccgcaagcg caaagccaat catcatcgac gcgacggtct
     1321 tgaacggcgg ctccttgccc atgccgatga agctacagaa ggcgagaaag aagacggcaa
     1381 atttctccgc cggcccgaac tgaagcgcga acagcgcaac gagcggcgcc acgaaggtaa
     1441 tgacgacaac ggcgaacagg gcaccgacga aggacgaggt aaaggcagcg gtgagcgcct
     1501 cgccggccct tccctgctgc gccatcggat ggccatcgaa ggtggtggca accgaccagg
     1561 gctcgcccgg gatgttaaat agtaccgagg taatggcgcc gccgaacaaa gccccccaat
     1621 agatgcatga cagcatgatg atcgccgagg tcggtgacat gctgaaggtc agcggcagaa
     1681 ggatcgccac cccgtttgca ccgccgaggc ccggcagcac gccgatcatc acgccaagca
     1741 ggatgccgca cagcatgacc agcaggttga acggctgaag gacgacggcg aagccgtgaa
     1801 agagattgaa aatttcttcc atcgctaaat tccgtcgtta caggtgcaat atctcttcca
     1861 acggtccctt cggcaaaggc accaggaacc atttctcgaa cgtcaggtag attacgatcg
     1921 gcgtgccgat agagatcgcg gccgtcaacg accaacgata ctttcctagc cacgacatga
     1981 accaggcgat cagggctgcc gagacgacgt atatgccgag atagggaatc gccacgacat
     2041 agattgcggt cggcaccaag acgtccagca cctggcgcaa ttggccccat tcggcaaagc
     2101 gtggccggcg atccgttagc cggatttgca gaagattcac cgcactcgat acgatgatca
     2161 gcagcccgat gtagaaagga aagaatcccg aacgcgggcc ttccactccc caaccgacgc
     2221 cgacctgaag gctgcccacg acgacgatgg cgccgaacaa tgccgtaaaa agagagacac
     2281 cgatttccac cgcccgttgg cgcggaccac cgccgcggcc cctatcgctc attgaactgt
     2341 catgggccat tgcgaaatcg ccgcgggtca cggccactgg cgcgcgttgt tactgtgttg
     2401 ctccaaggaa accagcttcc ttcatcagtg ctcggtgccg ctcttcctca cccccgagcc
     2461 atttggtgaa ttcggcaccg gtcataaagc tttggttgaa cgcaccatcc ttcatcaagt
     2521 ttgtccattc aggcgcctca cggacctttt tcaataggtc gacgtaatat gccgtttgct
     2581 catcggtgac gccgggcgcc atgaagaagc cccgtagcat cagatactcg acatcgaggc
     2641 ccaccgactt gcaagtcgga atgtcggacc aggccttgtc gccaatcttg tcggtataag
     2701 gaatggtctt ggtgtcgaac acgcacagcg gccgaaccga gcctgccctc cactgcgcca
     2761 tcgcctcgat cggattgttg acggtggaat caacgtgctt gccgacgagc tgcacggcga
     2821 cttcgccacc gcccttatac gggatatagg tgaacttggt gccggtaacc ttctcgatcg
     2881 ccacggcgat gatctgatcc tcctgcttgg agcccgtgcc gcccatctta aactggccag
     2941 gcggggccgc tttcacggcg gcaatgtatc cctgcgcgtc ctggtagggc gtgtcggcat
     3001 tcacccacag gatgaactcg tcaagcgcca ccatggcgac cggggttaga tcccgccagt
     3061 tgaacggaac gccggtggcc agaggcgtgg tgaaaagatt cgaaagcgtg ataacgagct
     3121 tgtgaggatt gccacgcgaa cctttgacgt cgagaaagcc ctcaccgccg gcgccgccgg
     3181 gcttgttgat caccaccatc gactgcttca tcagattgtg tttggtgacg atgccctgga
     3241 cgacccgcgc catctggtcg gcgccgccgc cggtgcctgc cggtacaatg atctccacgg
     3301 gccggctcgg ctcccaagcc gcctgcgtgg tcgatacgct acccgccgac agcgctgccg
     3361 cggacagcac tgccgcggca agcgctaccg cattccgacc cgtgtttttc atcggacttc
     3421 ctccgtcaat gtccagctgt cacttccagg tgcgcaattg cccagctcat ggcgtccgcc
     3481 ggcatcatgg atatgactgc cagcgaaagg accaagccaa gagcagagaa aagaagaacc
     3541 actgtcagat cattggctcc ctcattggcc gtgtacatga ccgcctccgg tacttggatt
     3601 gaaccgcgtc agtagcctat gcccgatgtc aaacatctcc tgcagcgcgg cagcaggcgt
     3661 gctgtcgttt ggctgtgccg aacactcggg ggcgcgcgcg cgggaacctc ttccccactg
     3721 ccggggcatt ggcgcatcat tccgatgcat atccacccgc cttggcgccg ttggcgcacc
     3781 gtccatcacg gacggagtgc gccctctttg ccctaggtta gggagcgtca atgcggtcga
     3841 gtacccgtaa cgatcggggg gtagttctac gggttgatgc gtccaagccg aatggcctgc
     3901 cgcacgagta ttgcgacgct gccggcctgc atcttctcca taatctcggc gcgatagcct
     3961 tcgaccgtcc tcacaccgat attcagccga gcggcaatgg catggctcgt gaacccttga
     4021 acgacgagat caaagatttc gacctgtcga ggtgttagtc gcgcgaacat gacatcaaca
     4081 gcctgatgcg atttccgcaa atcctgctgc tcgaacgtgc gcgcaagcgc tcgattgatc
     4141 gctgcaacaa gtttggcatc atcgatcggc ttctcgatga agtcttccgc tccagacctg
     4201 atcgccgcga ccgccatcgg aatgtcggca tgacccgata tgagaacgac aggaagggtg
     4261 acctttcggc gaccaagttc gcagacgagc tcgatgccgt ccgtgccggg catccgtaca
     4321 tcagcgacaa cgcagccagc acgcggttgt tcaatcgctc gaaggaagct gtcggctgat
     4381 tcgtaggtct cgacgctgaa cccgaacacg ctgagcatct cgccgagtgc atggcggacc
     4441 gactcttgat catcgatcac aaagaccgtc ggcccggcca tcgtcacatc gcttgcgatt
     4501 gttcgagcgg cagcgaaaat cgaaactccg tcgcgcctgc ctgccgggcg tgaagccaga
     4561 cgcgcccacc atgcgcttcg acaattgaag cgcatatcgg caggccgagg ccgaacccct
     4621 catatttcga cgtcgtaagg ggatggaata gccgctcggc cagctcgtct ccgacgccgg
     4681 gaccactatc cgaaacaccg atctcgatac gttgcggcgc agcgagccga cgggcgacga
     4741 cttgaatgcg accgtccatt tgacgtgctc caaggatgga ctcgatcgca ttgcggatca
     4801 gattgagaac gacttg
//
LOCUS       DATILV010000403         4557 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1886806, whole genome shotgun sequence.
ACCESSION   DATILV010000403 DATILV010000000
VERSION     DATILV010000403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4557)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4557)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4557
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1886806"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..512)
                     /locus_tag="VLJ17_09235"
     CDS             complement(<1..512)
                     /locus_tag="VLJ17_09235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase family 1"
                     /protein_id="HSV23198.1"
                     /translation="MHFAFAIVSLFPGGGLQRDCVDIARRVRMLGHEVTIFTSRKSGD
                     GFAEDLPVRILNVSCHKNHRRQRAFSDEFSRCASRKFDLLVGFDKLSGLDVLYCSDRS
                     MLARATKNPFLHLVPRYREFIGLEKDCFAPRRTAKLLLLGDSQFEEYWNSWKTEPNRL
                     VMLPPTLTLT"
     gene            complement(1127..1291)
                     /locus_tag="VLJ17_09240"
     CDS             complement(1127..1291)
                     /locus_tag="VLJ17_09240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23199.1"
                     /translation="MRFSIIMAPRASAATSLGLSARFIRPSRWRAAKAEIIWIDVQRL
                     AIDATTYANA"
     gene            complement(1308..2732)
                     /locus_tag="VLJ17_09245"
     CDS             complement(1308..2732)
                     /locus_tag="VLJ17_09245"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HSV23200.1"
                     /translation="MQSNRGGRILFDVSTAMRWAGPPAGIVRVERKLALWAYANIASV
                     VFVFFDPSRLAYCEITRDVRQFLTGEAALDTLGLTNPALPGRRRTDRIPVALKPAFLW
                     IGQTRRKALNSLERLRLSTDRPWLARLADRLQRRLMSPKYRSFMVRQDDTRLPFFPYK
                     MALGPRIEFGRNDTLICAGSGWGHTNIEALSDLKSRIGFRMVLLCHDLIPLMFPRFYR
                     DYDVELFGNYMHKALTIADRIVVNSRSVEADCRAYCTQHGIIAGDITLGFLGFDVEAV
                     RPKSVAELPASLRAGQFAMLVSTIEPRKGHRLLYKVWRRLMAAGVPQVTGFKLVFAGR
                     TGWMIDDLLADIRNDPQTADQILLIHDVDDGMLTALYQSAAFCVYPSLYEGYGLPVIE
                     AFAHGKVVLTSNGGALPELARGFSPCLDPTHEQAWYEMMKQWIESPQAREPYEREIRA
                     RFRHPTWSEAAANFFAGISTAKES"
     gene            complement(2719..3837)
                     /locus_tag="VLJ17_09250"
     CDS             complement(2719..3837)
                     /locus_tag="VLJ17_09250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSV23201.1"
                     /translation="MGLSNIQILEIGDHHHFKQTFFERTHLLWTGHRRPKSLAPEDYA
                     DCTPRAFAQAMREVAEGKFDIVVAYAGQRSPWHPRFWLRAMFSDSPLTAAVRVFGVAW
                     LRHMRLRVPMVVLDMHDLATIHPSNFFLLDVARVYFKRELPVDHWQTLYGAAHANLPT
                     LRIRRNPHWRRRLAKLQPISLQAGLFDLDCPDADVFSAKAFDVFFAGSIDGNSTVRSD
                     GLQQLRILADRGLKIDIATDRLSQAEFCRRMSRAWLAWSPSGLGWDCYRHYEAPQCLA
                     VPVINYPTIARHQPLKDGVHAVYYAPEGEGLSCAIEAALADKERLRSIAVAGRAHVRA
                     NHAGPAFCERVLRSALRDEISSCRDEAPIPGEGADAVQ"
BASE COUNT         1045 a         1303 c         1309 g          900 t
ORIGIN      
        1 cttgtgagcg tgagcgtcgg tggcaacatg accagccgat tcggctcggt cttccatgaa
       61 ttccaatact cctcgaattg agaatcaccc aacagcagga gtttggccgt ccgacggggc
      121 gcaaagcaat ctttttctaa accgataaat tcgcgatagc gcggcaccaa gtgcaagaag
      181 ggattcttgg tggctcgcgc cagcatcgag cggtccgagc agtacagaac atcgaggccg
      241 ctgagcttgt cgaagccgac aaggagatcg aattttcgcg atgcgcaccg gctgaattcg
      301 tctgagaatg cgcgttgccg acgatgattc ttatggcagc taacgttcaa gatgcgcacc
      361 ggcaggtcct cagcgaagcc gtcgccggat tttcgcgacg tgaagatcgt tacctcgtgc
      421 ccgagcattc ggacgcgacg cgcgatgtcg acgcaatcac gctgaaggcc gccgcccgga
      481 aacaagctga cgatcgcgaa cgcaaaatgc atggctcaca tcaacaatgg gatgcgccga
      541 ggaattagac atgttttcaa taccgattgg cccctacccc accagttact gttccgattc
      601 gtcatggtaa tagcgcaccc gctctcctcg ggacacacaa caaccagccc ctagacgcaa
      661 actagccgca attcaggttg atttcaattg cagcgggtga aatagtgagt gacatgttct
      721 gaagcgttgc attttctcct cctgcctggg cttgccgggg aggcagtgga ggtgtttcgg
      781 ggcgatcagg gaagccgttg tttttcagat tatttcaggg gatttgccgg accgtgcgga
      841 tccgtaaagt agtttatccg tattcgactc gtctgtgaaa aattcccaag ccgttgagtg
      901 gactcgcgag tcgccggaaa tcacccgata gaatttgcaa ggttttacag aagttcctgc
      961 aaattccttg caaattgccg gaggtatcgg attcttccac gagcttgcct gccagcggca
     1021 atcaaccgct ttgattcggg aagccgccac aatatcaaaa ttcagtggta tttttgtcac
     1081 gcttaaggga attccagcgc tcatacatgg aggtggcagc gttgacctac gcattggcgt
     1141 atgtggtggc atcgatggct agacgctgca cgtcgatcca aatgatttcg gccttcgcgg
     1201 cacgccaccg gctcgggcga atgaagcggg cagaaagacc caatgaggtt gccgccgaag
     1261 cgcgcggcgc cataatgatc gagaaccgca tggaaccttt gacggtctca cgattccttg
     1321 gcggtggaaa tgcccgcgaa aaagttggcg gcggcctcgg accaagtagg atgccggaat
     1381 cgcgcgcgga tttcccgttc gtaaggctcc cgagcctgcg gagattcaat ccattgcttc
     1441 atcatctcgt accaagcttg ctcgtgggtc ggatcgaggc acggggagaa tccccgcgca
     1501 agctccggca gtgcgccgcc gttcgacgtc agcacgactt taccgtgagc aaaggcttca
     1561 atgactggaa ggccgtagcc ctcgtacaag gacgggtaaa cacagaaggc ggcgctttga
     1621 tagagcgccg tgagcatgcc gtcgtcgacg tcgtggatca gcaggatctg atcggcggtc
     1681 tgcgggtcat tccggatgtc cgcaagcaga tcatcgatca tccaaccggt acggcccgca
     1741 aacacgagtt tgaaacccgt tacttgcggc acgcctgcgg ccatcaaacg ccgccagacc
     1801 ttataaagca gacggtgtcc cttgcgcggc tcgatcgtgc tcaccagcat ggcgaattga
     1861 cccgcgcgaa gactggcagg caattcggcg acggatttcg ggcgaaccgc ctcgacatca
     1921 aagccgagga acccaagagt aatatcgccg gcaatgatgc catgctgtgt acaataggcg
     1981 cgacaatcgg cttcaacgct gcgggaattg accacaatgc gatccgcgat ggtcaaggct
     2041 ttgtgcatgt agtttccgaa cagttcgaca tcgtagtccc gatagaaacg cggaaacatc
     2101 aacggaataa gatcgtggca caacagcacc attcgaaatc cgatccgcga cttcaaatcg
     2161 ctcagagcct cgatattggt atgtccccat ccggatccgg cacaaatgag ggtgtcattt
     2221 cgcccgaact cgatgcgcgg gccaagggcc attttatagg gaaagaacgg cagacgagta
     2281 tcatcctgcc gcaccatgaa actacgatac ttaggcgaca tcagccggcg ttgcaggcga
     2341 tcagccagac gggcaagcca ggggcggtct gtactcagcc ggagccgctc aagggagttg
     2401 agcgccttgc gccgagtttg accgatccag agaaaagctg gcttcaacgc gacgggaatt
     2461 cgatcggttc ggcgcctccc gggcagcgcc ggattggtca gtcccagcgt atcgagtgcc
     2521 gcttcaccgg tcaggaattg acgcacgtcg cgagttatct cgcaatatgc caagcggctc
     2581 ggatcgaaaa aaacaaacac cacgctggca atatttgcgt aggcccacaa tgcgagcttg
     2641 cgctcgacgc gcacgattcc ggccggcggt cctgcccatc gcatcgccgt tgagacgtcg
     2701 aacaggattc gaccgcctct attggactgc atcggccccc tccccgggga tcggcgcctc
     2761 gtctcgacaa gaggatattt cgtcccgcaa cgccgagcgc agcacccgct cgcagaacgc
     2821 ggggcctgca tgattggctc gaacgtgcgc ccgtccggca acggcgatcg acctgagccg
     2881 ttccttgtcg gcgagtgcag cttcgatcgc gcagctcaat ccctcgccct ccggagcgta
     2941 gtagacagca tgaacgccgt ctttcaacgg ttgatgcctt gcgatcgtgg gatagttgat
     3001 gaccggcacc gccaagcatt gcggcgcttc atagtgcctg tagcagtccc aaccgagacc
     3061 cgaaggagac caggcgagcc aggcccgcga catgcgccgg cagaattctg cttgcgacaa
     3121 ccggtcggtt gcaatatcga tcttcaatcc tcggtccgcc aatatccgca attgctgcag
     3181 gccatcactt cggacggtcg aattgccatc gatggaacct gcgaaaaaca catcgaacgc
     3241 ctttgccgag aagacatctg catcagggca atcgagatcg aataaaccgg cctgaagcga
     3301 gatcggctgc agcttcgcga gccgacgtcg ccaatgcgga tttcggcgaa ttcttaaggt
     3361 tggcagatta gcatgcgccg ccccatagag ggtctgccaa tgatccactg gcagttcgcg
     3421 tttgaaatag actcgtgcga catcgagaag aaaaaaattc gaaggatgga tggtcgcaag
     3481 atcatgcata tcgagcacca ccatcggtac gcgtagccgc atatggcgca gccacgctac
     3541 accgaatacg cggactgcgg cggtcagtgg cgaatcgctg aacatggcgc gcagccaaaa
     3601 gcgggggtgc cagggcgacc gctgaccggc ataagcaacc acgatgtcaa acttgccttc
     3661 agccacctcg cgcatcgcct gtgcaaaggc gcgcggcgtg caatcggcat agtcttccgg
     3721 tgcaagcgat ttcgggcgtc ggtgtcccgt ccacagcaga tgggtccgtt cgaaaaacgt
     3781 ttgcttgaag tgatgatgat cgccgatttc caggatttgg atattggaca ggcccatttt
     3841 gaacccaatt tgatggacgg gcgacttcgt gatagctgaa ccgccagaca acggcaacgc
     3901 accaaaatcg gacgacgcag agttgacata caaggctgct tccgtcgctg cagccttccg
     3961 gtcgggcaag gtcctcgccc ggcacgccag cgtgcggttc gatgacacct cagatttccg
     4021 cggtaatggc ggtccgggat gagagcgctg gcttggcgag gccatagcat cggttcaata
     4081 tcaaccgctg ggcgatttcg agttcatcat tgtcaacgac ggacgcctct ctgcaagtca
     4141 tcgaagcaag cgcacgaaat gacctgcgca tccgcgccgt ccgtcaggaa cgactcgggg
     4201 gctggttcca gcgctcaaac gcgggctcgc cgaatcacgt ggtcggctta tagcgggtcc
     4261 ggatgccgtc gaccgtgccc accgacagcg cctgccacgc cagaggtaat atctgggcag
     4321 ccaccctgag gttggcctgc ttggcacgtg gaccgacaag atcaacgagc ggggttggtt
     4381 gatcttactg agtaagatta aggagctcac taaggccgcc gacgcgaccg gaaaagctcg
     4441 cgccattgct cgcccgcaca aacccgtttc tgcacgactc gacaatgatg cgcaatacga
     4501 tcttgcaaaa gattgagaga cgaattggcc caactggcgt tgtttagact aatttgt
//
LOCUS       DATILV010000404         1648 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4183010, whole genome shotgun sequence.
ACCESSION   DATILV010000404 DATILV010000000
VERSION     DATILV010000404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1648
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4183010"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            344..1494
                     /locus_tag="VLJ17_09255"
     CDS             join(344..806,806..1494)
                     /locus_tag="VLJ17_09255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612384.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HSV23202.1"
                     /translation="MIFKDIAVKKYVVRLRAEERAYLDELIRKGKSPAQRLMKARILL
                     KADVGEGGEGWSDCRIIEALGTSASMIYRVRKQLVEEGFEAVLSRKQRAMPAVPRIFD
                     GEKEAKLIALACSEPPAGRVRWTLRLLEEKVVDLNIVDKASDNTIGRVLKKTFLKPHL
                     KEQWVIPPKANSAFVAAMEDVLEVYHRPHDPDYPLVCVDESSKQLIEETRTPIPMKPG
                     QPARYDYEYERNGTANLFMMFAPLEGWRHVKVTDRHTAVDYAHVLKELSDTHLLDAKK
                     IVLVQDNLNTHTPASLYEAFPADEARRLVERFEWHYTPKHGSWLNLAESELGVLSSQC
                     LDRRMSDKSFLAREVAAWEAIRNKTHTRANWRFTTENARVKLKHLYPSF"
BASE COUNT          369 a          474 c          480 g          325 t
ORIGIN      
        1 actcggcgcg ggctaggtgc gctcatcgcg gcgggcagtt ggcggtcagc agggccagcg
       61 caccggccaa tccggtcaat gccacgacgc cctggatccg ccgctcgccg ttcgtgatct
      121 cgagtgtgag ttcgtccgat aatttgccac ctccgctagc gcggccgcct cgccggccaa
      181 agcgatcgcg gcgcccgggg cgaccaccgt ggagggcaat tcggccgtgc tggtggcggc
      241 ggtaagcttc acgttcctag tcgccagcgt cagccaattc gcaaggattc gttaaccatt
      301 cgttgattca ctttcgtcct cagcccgggg gacggaggcg atcatgatct tcaaggacat
      361 agcggtaaag aaatatgttg tgcggttgag ggcggaggag cgtgcatacc ttgacgagtt
      421 gatccgcaag ggaaaaagcc cggcacaacg gctgatgaag gcgcggatat tattgaaagc
      481 cgatgtcggc gaaggcgggg aaggatggag cgactgcagg atcatagagg ctcttgggac
      541 cagcgcctcg atgatttacc gggtccgcaa acagctggtc gaagagggct ttgaagccgt
      601 cctgagccgc aaacaacgag ccatgccggc tgtcccgcga attttcgatg gcgaaaaaga
      661 ggcgaaactg attgctttgg cctgttccga gcctcccgcg gggcgtgtcc ggtggacgtt
      721 acggttgctg gaggagaaag ttgtggacct caatattgtc gacaaggcca gcgacaacac
      781 gatcgggcga gttttaaaaa aaacattctc aagccccatc tcaaagagca atgggtgatc
      841 ccacccaagg cgaacagcgc ctttgtcgca gcgatggaag atgtgctgga agtctatcat
      901 cgaccgcacg atcccgacta tccgctggtt tgtgttgacg agtcgtccaa gcaacttata
      961 gaagaaacgc gcaccccgat cccgatgaag ccaggacaac cggcgcgtta tgattacgaa
     1021 tacgagcgta acggcacggc caatctattt atgatgttcg ctccgctgga gggctggcgg
     1081 catgtgaaag tcacggatcg ccacacggcc gtcgattacg cccatgttct caaggagttg
     1141 tcggacaccc acctcctgga tgctaagaaa atcgtgctgg tccaggacaa tctcaatacg
     1201 cacacgccag cttcacttta cgaagcattc ccggccgatg aagcccgccg tctggtcgaa
     1261 cggttcgagt ggcattacac cccaaagcac ggcagctggc tcaacttggc agaatccgaa
     1321 ctgggtgttc tttcctctca atgtctcgat cggcggatgt ccgacaaatc attcctcgcc
     1381 cgcgaggtcg cggcctggga ggccattcgc aacaagacgc acaccagggc caattggcga
     1441 ttcaccacag agaatgctcg ggtcaaactc aagcatctct acccttcgtt ttgattgaat
     1501 cgcccgacta ggactgacaa ggagcgcatc agctccctgc ctgactgccg agacgaaagc
     1561 tgcctccaag tcgatccccg tcctgaccct gaggacaacc agttgtcggc caaaggcgcg
     1621 tatcgcagct tcgacgtctt cttccgtt
//
LOCUS       DATILV010000405         1913 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4183023, whole genome shotgun sequence.
ACCESSION   DATILV010000405 DATILV010000000
VERSION     DATILV010000405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1913)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1913)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1913
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4183023"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(118..1839)
                     /locus_tag="VLJ17_09260"
     CDS             complement(118..1839)
                     /locus_tag="VLJ17_09260"
                     /inference="COORDINATES: protein motif:HMM:NF014589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase C-terminal
                     domain-containing protein"
                     /protein_id="HSV23203.1"
                     /translation="MYLLGIHNSAHDAAACLFCDYQLVAAVSLERLTRKKGAGVCAEQ
                     ELPIAAIDECLDIARIGRADVDVVCSTRDHWEFQSYALQGRLRLKQKAFQLLRQKRLP
                     QMTYMMQKLGVSNALDIFDVDSFRRRYGFEKASIYFANHHFAHGIAAYFYSLFDDSLV
                     YTTDACGDNVAYSARVAKQSVFEVLFGSDASLHAKFPAHSLGNLYGFFTQALGFLMDR
                     HEGKLTGLSAFGEARAAEEIKRHFRVEENGEISADFPSHDAMRSFAFDVAGRLSRQDA
                     AASVQSVLEELICEAVEKLLRVTGIRSLAVAGGVFANVRLNRALIELTSADRIFIFPA
                     MGDEGLPVGACLLYLHERDGASAWQRQRRCLEHVYLGRGYNDMFAVASAGYPAVVRDS
                     AGSIDKAVDALVAGKVVAIYTGRMEYGPRALGNRSIMASPVAREINDSINKRLDRSEF
                     MPFAPVVLEQHAAEVFDLHEGNSYAARFMTITCGVRTQWRERIAAVVHVDGSARPQVL
                     RESDNPLYFRVLSRFHEKTGLPVLVNTSFNVHEEPIIDRPDQALRALVDGRVDYILTQ
                     DSLYSIG"
BASE COUNT          425 a          553 c          541 g          394 t
ORIGIN      
        1 cgacccggac gacgacgact tggatgccga gcttgaacgc ctgttctcgc cagaataggt
       61 ttccagcttt gaaactgcgc cattatgcct agaagtttga ccgatgtgcc tagacgttta
      121 accgatcgaa tacaggctat cctgggtgag gatgtagtcc acccgaccat caaccagcgc
      181 acgaagtgcc tgatcgggcc tatcgatgat cggctcttcg tgaacgttga agctggtgtt
      241 caccagcacg ggaaggccgg ttttttcgtg gaaccggctg aggactcgaa aatacaacgg
      301 attatcgctc tctcgcagga cctgcggtct ggccgatccg tcgacatgca cgacggcggc
      361 gattcgttcg cgccactgtg tccgcactcc gcaggtaatc gtcatgaacc gcgccgcata
      421 ggaatttcct tcgtgcaggt caaatacttc cgcggcatgt tgctccagca cgacaggtgc
      481 gaacggcatg aactctgagc ggtcgaggcg cttgttaatg gaatcgttta tctcccgagc
      541 aaccggggac gccatgatgg atcggttccc gagcgctcgc ggcccgtatt ccatccggcc
      601 ggtataaatg gcgacaacct taccggcgac gagagcatcc acagccttgt cgatactacc
      661 agcgctgtcg cgtacaaccg ccggataccc agcggaagcg accgcgaaca tgtcgttgta
      721 cccccgaccc aagtagacgt gctccaggca ccggcgttgt cgctgccacg ccgacgcgcc
      781 atcacgctca tgcaggtaga gcaggcaggc accgaccggg agcccctcat cgcccatggc
      841 cgggaaaatg aaaatccgat cggcgctggt cagctcgatt agtgcgcgat taagccgtac
      901 attcgcaaat acgcctccag ccacagccag agagcgtatt ccggtgacgc gcagcagctt
      961 ttcgaccgcc tcgcaaatga gttcctcgag taccgactgg acggaagcgg cggcatcttg
     1021 gcgcgacaat cggccggcta cgtcgaaagc gaaagatcgc atggcatcgt ggctcggaaa
     1081 atcggcgctg atttcgccgt tttcttcaac ccgaaaatgc cgtttgattt cttcggcggc
     1141 cctcgcctcc ccaaaggccg atagtccggt cagtttcccc tcgtgacgat ccatgaggaa
     1201 gccgagtgcc tgggtgaaaa agccgtaaag atttcctaag ctgtgggccg gaaacttggc
     1261 atgaaggctt gcatcggagc cgaacagcac ctcgaacacg ctctgcttgg cgacacgcgc
     1321 gctgtaggca acgttatcgc cgcaggcatc ggtcgtatag accaggctgt cgtcgaacaa
     1381 tgagtaaaaa taagcggcga tgccatgggc gaaatgatgg ttagcaaaat aaatactggc
     1441 cttttcaaag ccgtagcgcc tcctgaatga atcgacatcg aagatgtcga gcgcattgct
     1501 gacgccgagc ttttgcatca tgtaggtcat ttgcggtagc cgcttttgcc gcaatagctg
     1561 aaatgccttc tgcttgagtc gcaagcgtcc ctgcagcgca taggactgaa attcccagtg
     1621 gtcgcgcgtt gagcagacca cgtcgacgtc agcgcgacca attctggcga tatccaggca
     1681 ttcgtcgatg gcagcaatcg gcaattcctg ttcggcgcaa acgcccgcgc ccttcttgcg
     1741 cgtcagcctt tcaagtgaaa cagcggccac caattgataa tcgcaaaaca ggcacgctgc
     1801 cgcatcgtgc gcggagttgt ggataccgag caggtacatt gggaattggg tatactggat
     1861 agcgagaaac tgacgtagct tcggcgttgc cccgggtgct tatgatcgcg tgt
//
LOCUS       DATILV010000406         2232 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2142159, whole genome shotgun sequence.
ACCESSION   DATILV010000406 DATILV010000000
VERSION     DATILV010000406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2232)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2232)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2232
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2142159"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..857
                     /locus_tag="VLJ17_09265"
     CDS             <1..857
                     /locus_tag="VLJ17_09265"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HSV23204.1"
                     /translation="IPVVPGYEVAGRVDAAAAGLDENWIGRDVVAMTRFGGYADTVCV
                     PAKQVFARPSGMSALEAAAIPVNYFTAWQLIVVMGGLKRNETVLVHSAGGGVGIAATQ
                     IAKHLGGRVIGTASAGKHAELRALGIDHLIDYRTEDFEMRSREITDGRGVDLILDPIG
                     GESWRKGYRLLAPAGRLGAYGLSAAATQKQRRLLATLGVIARIPWFQFNPLALMGANK
                     GVFGVNLGHMWGEIDRIRGWADRLFDLWTQGVVKPKIAQTFQFAEVAQAHHFIQDRKN
                     IGKALLVP"
     gene            complement(936..1121)
                     /locus_tag="VLJ17_09270"
     CDS             complement(936..1121)
                     /locus_tag="VLJ17_09270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23205.1"
                     /translation="MSSDTPSKVQARHPKRNAFLYVRQSSLRQVFENSESTKRQYDLR
                     QRAVALGWQVDQVIPSV"
     gene            complement(1159..1506)
                     /locus_tag="VLJ17_09275"
     CDS             complement(1159..1506)
                     /locus_tag="VLJ17_09275"
                     /inference="COORDINATES: protein motif:HMM:NF036442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5372 family protein"
                     /protein_id="HSV23206.1"
                     /translation="MVTHAFHPLYRREFALVDRYLAWGEDRVCFHDDEGGLRYLPTAW
                     TSMAPPDPFVQTSAGRSHLRIENLLQLTTLIAGQPQAKRPRPRRRYATGPYRGPLRRR
                     ACPTALSGASSIS"
BASE COUNT          435 a          650 c          670 g          477 t
ORIGIN      
        1 ccattccggt agtgcccggc tacgaggtcg caggtcgcgt cgacgcggcc gcagccgggc
       61 tggacgaaaa ttggatcggg cgcgatgtcg tggcgatgac ccgcttcggc ggctatgcgg
      121 ataccgtttg cgttccggcc aaacaggtct ttgcgcgccc gtccggcatg tcggcgctgg
      181 aagccgcggc cataccggtc aactacttca cggcatggca actgatcgtg gtgatgggcg
      241 gcttgaagcg caacgagacc gtgctcgtgc attcggctgg cggcggcgtc ggcatcgccg
      301 cgacgcaaat cgccaagcat ctcggcggcc gcgtcatcgg cactgcgtcg gcagggaaac
      361 acgccgaatt gcgtgcgctt ggtatcgacc atctcatcga ttaccggacc gaggattttg
      421 aaatgcggag ccgcgagatc accgatggcc gcggcgttga tctcattctc gatccgatcg
      481 gcggcgagtc ctggcggaaa ggatatcggc tgctcgctcc cgccgggcgg cttggcgcgt
      541 atggtctgtc cgcagcggcg acgcaaaagc agcgccgcct ccttgccacg ttgggcgtga
      601 tagcgcgcat cccgtggttc cagttcaatc cgctcgcgct tatgggcgcg aacaagggcg
      661 tcttcggcgt caatctcggt cacatgtggg gcgaaatcga tcgcatccgc ggatgggctg
      721 accgcttgtt cgatttatgg acgcagggcg tcgtcaagcc gaagatcgcc caaacgttcc
      781 agttcgccga agtcgcacaa gcgcaccact tcattcagga tcggaagaat atcggtaagg
      841 cgctgctggt accgtgaaat aacgggtgtc gtgacggctt gcggtcgtgt ctgcttgctt
      901 cgcaagaaga ccaatatctc aatcgtcttt gcaggtcaga cgctcggtat cacttgatcg
      961 acctgccagc cgagtgcgac ggcgcgctgg cgcagatcat attgacgttt ggtgctctcg
     1021 ctgttctcaa acacctgacg tagggaagat tggcgcacgt acagaaaagc gttcctcttc
     1081 gggtgtcgag cctggacttt ggatggtgta tcggaactca tgtcaccacc tccaacgctg
     1141 ttgttaaagc catggtggct acgatatcga cgaggctccg ctcaatgccg tcgggcatgc
     1201 gcgtcgccgc agcggcccgc ggtatggtcc cgttgcgtac cgccgccgcg gcctgggccg
     1261 cttcgcctgc ggttgtccgg caatgagcgt cgtcagctgc aacaggtttt cgatacgcaa
     1321 atgcgagcgt cctgccgacg tctgcacgaa cggatccggc ggcgccatgc tcgtccacgc
     1381 tgtcggtaag tatcgaagcc cgccctcgtc gtcatgaaag cagacgcggt cttctcccca
     1441 ggcgaggtac cggtctacaa gcgcgaactc gcgcctataa aggggatgga aggcatgggt
     1501 aaccacgaac gtctgcgtcc gatcaagcgg aacaggtgta gtggactgct tttgacaatc
     1561 cctatgttga gcgcctggtt gggacgctgc ggcgcgactg catggatcat gtgctgatcc
     1621 tcggcgaaca gcatttgcga cgggtcctaa cttcgtattc gatctattac aacgagatgc
     1681 gtacgcacct ggggttgggc aaggacgcgc cgctgagacg agccgtccaa cgatctggaa
     1741 ccatcgtcag cacatcaatc ctctccggat tgcaccgtcg atacgcccgg atttgatttt
     1801 tgggagggac aggtgcaata ttctccaaac cctcacagca gcgccaagcc agatcatgct
     1861 cgctttgacc gcgtagccca cggcttggga ggttacccgc caggaccgtc ccaggtctgc
     1921 atcgagctat tcgctccttc atccagtgtc tttgacctca cgaatgtgcc aactatttca
     1981 ggcattcagg atatatatcc atataactgg aatccgctgt agcaactaac atcgggatcg
     2041 gttggagagt cgggcttgct ccgctcacca ttgcatcgtg ttgtcgcgat tgaccgctcc
     2101 gggatcatgt gcgggccgaa gctatttcat cgagctagaa aaggaacata atccgagtaa
     2161 ctaaacaatc ttaagctaag cgttttcacc aaattgcgga gcgccccgcg caattatgtt
     2221 tgtgggctcg ct
//
LOCUS       DATILV010000407         1740 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_351433, whole genome shotgun sequence.
ACCESSION   DATILV010000407 DATILV010000000
VERSION     DATILV010000407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1740
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_351433"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(470..1087)
                     /locus_tag="VLJ17_09280"
     CDS             complement(470..1087)
                     /locus_tag="VLJ17_09280"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HSV23207.1"
                     /translation="MNTVIQLRPSQSEKPTVRGGRAKNADYRQREYLTESEVDKLLAT
                     AGDSRNPVRDRLVVLMAFRHAFRVSELVSLRWEQIHLDTATIHVKRAKNGTPGNHGLQ
                     GDELRLLRALRREHPHADFVFLSERKAPLSVDGAQKLIERLGVAAEMPFPIHAHMLRH
                     AAGYALAARGIDTRTLQAFMAHRSIANTVVYTSVADKRIRNIWGK"
     gene            complement(1278..1547)
                     /locus_tag="VLJ17_09285"
     CDS             complement(1278..1547)
                     /locus_tag="VLJ17_09285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015670170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23208.1"
                     /translation="MTIRSRREVVTFKHPFRIRGIDRLLPAGAYEVVTDEETIEGLSF
                     EAFRRVATMIKVPAEGSRGLAMEVVSIRSVDLADAQRVGASASDG"
     gene            complement(1525..>1740)
                     /locus_tag="VLJ17_09290"
     CDS             complement(1525..>1740)
                     /locus_tag="VLJ17_09290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23209.1"
                     /translation="TLRRCQGISERQSVLRWPRQERAASDTECLYWPRGPRKRWLLQR
                     KERIMLSGPAPVGVLRKAGAHDHPFPT"
BASE COUNT          360 a          525 c          521 g          334 t
ORIGIN      
        1 ggaggcggac gtgatgagca ccttgtacat tattcttgtt gtcccaagcg tggcgatttt
       61 catcgcgcat atgattgatg ccatccgttc ctgaaggtgg catccttaat cattgccccg
      121 cagcaccagg aaaagacctc cagcgcgcat gacgtgcgcg ttgatggcgc aagaaaacaa
      181 attgttggcg cgcaataaca agaccggact tcgattgttc tctaagtgtc agttgcgatt
      241 cccttgccgc ggcagggggc ggaatcgtcg gcggccctgg taccacccaa aaggtgcgcc
      301 tgggccgttc gcccctttgg gcaaaaggct caacatgggt cggcgtgctg gactcagacg
      361 ctttgcacga tcatccagcc aataatcacg atcgcgggcg aactcaggat cgccaatata
      421 acggagccta aaaccagatc gacgcggcgc tgcggaccgt cctgcacgct catttccccc
      481 agatattccg gatgcgcttg tcggctaccg acgtgtagac gacggtgttt gcgatcgagc
      541 gatgggccat gaaagcctgc aatgtacgtg tatcgattcc acgggccgcc agagcgtagc
      601 cggcagcatg ccgcagcatg tgggcatgaa tcgggaatgg catctcagcg gcgacgccaa
      661 gccgttcaat gagcttctga gcgccatcca ccgaaagagg agccttccgc tctgacagga
      721 acacgaagtc agcatgggga tgctcgcgcc gcagtgcccg cagcagccgc agctcgtcac
      781 cctgaaggcc atgattgccg ggcgtgccgt tcttggcgcg cttgacgtgg atcgtagccg
      841 tatcgaggtg gatctgctcc caacgcaggc tgacaagctc actaacccgg aatgcgtgcc
      901 ggaaagccat caagaccacc agacgatcgc gaaccggatt gcggctgtca ccggcagtgg
      961 cgagcaactt gtcgacctcg gattccgtca ggtattcgcg ctgccggtaa tcagcattct
     1021 tcgccctgcc accacgaact gtcggctttt cagactgtga gggacgcaac tggatgaccg
     1081 tattcattgg caaatttccc ctctgcgaat atgaactgtc gacataagga tgtaatgacg
     1141 acagacatca agcggggtag attcagctat ccacggggga atgatgccgg cacgactaag
     1201 gggccctgga cgaggcaaga gcttgaggcc gcgatcgatt cggctgcgtt ggcgcatagg
     1261 aaaaaacggc gggttcgtca gccatcggat gcgctcgcgc cgacgcgttg cgcgtcggcc
     1321 agatcgaccg agcggatcga gaccacctcc atcgccaacc cgcgcgagcc ttccgccggc
     1381 accttgatca tggtggcgac gcggcggaac gcctcgaacg atagcccctc gatcgtctcc
     1441 tcgtcggtga cgacctcata agcgccggcg ggcaacaggc gatcgatgcc cctgatccgg
     1501 aacgggtgct tgaaggtgac gacttcacgt cgggaacgga tggtcatgcg cgcctgcctt
     1561 tcgcaaaacg ccgacgggcg ctggccccga gagcatgatg cgctccttgc gctgcaatag
     1621 ccatcgcttt cttggccctc gcggccaata gaggcattcc gtgtcgcttg ccgcgcgctc
     1681 ttgccgcggc cagcgcaaaa cgctttggcg ctcgctaatc ccctgacatc ggcgtagggt
//
LOCUS       DATILV010000408         5307 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2653945, whole genome shotgun sequence.
ACCESSION   DATILV010000408 DATILV010000000
VERSION     DATILV010000408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5307)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5307)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5307
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2653945"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..407
                     /locus_tag="VLJ17_09295"
     CDS             <1..407
                     /locus_tag="VLJ17_09295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23210.1"
                     /translation="RRRLQDRIKGALGRLGIDVAALGDLTAEGASRVPDVTQTHPHIR
                     YHSFFASGRQHLLLPATCALLLPTHEYIRAATGQDNDGLVTLDSARYGEFQEPFWHGD
                     HIDICGHNLDTADLGLFQFDHFAAYDAIISGL"
     gene            complement(814..2568)
                     /locus_tag="VLJ17_09300"
     CDS             complement(814..2568)
                     /locus_tag="VLJ17_09300"
                     /inference="COORDINATES: protein motif:HMM:NF020976.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase D family protein"
                     /protein_id="HSV23211.1"
                     /translation="MASLRVPGLGPIVGATTDTTCRIWIRAGDPADHKSNLDEFRRTV
                     GVIGLVPRRSQIGRAWYFRLQREYDRTGTFVLGKDVQLGFYPDDYEDQGKPFPVKPPK
                     DAIAEPLLADTEYTVRLGTLTIDDPMPNDSTLSDAELFKRLPDIDKIKNELANLKAEE
                     CEATFRTFPKPDTIADNMSFLLGSCRYPGLLWKIKEADRIFGPMLQHFEDSDVLGKAA
                     RFTVMCGDQIYADMLNRMVPLMRADTFEEFQQRYVAAYGAPKLRELMRRSTTYMILDD
                     HEIEDNWTQDRLDDPGRHQLFNLAIGAYQSYQWSHGPRTWGRLLYYTFECAGYPTFVL
                     DTRTQRYKDDLPGLHDNHLLGRPSLDLANHPGQLQRLLDWLTEQQNKRGKVPKFVVTS
                     SVFVPNDMTERIAPVPHQDEVGDPPDPLFDLNTKRREESDSWPAFPNTRLTLLQHIVK
                     NKIQNVIFLAGDIHCSNTAEIEFDGNDGKDLKAFSVTSSAFYWPFPFADGDPNNYVHN
                     SRLPDQLDAFPVIGTDAIMHYRSFGYAQEDNFTRLDIDKKAATLTVRVFDRDGRIITV
                     DGRDGAKTTKNMLQLASW"
     gene            complement(2917..4848)
                     /locus_tag="VLJ17_09305"
     CDS             complement(2917..4848)
                     /locus_tag="VLJ17_09305"
                     /inference="COORDINATES: protein motif:HMM:NF025341.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV23212.1"
                     /translation="MRLRDFITHTINEGVGRTGIELLAAAGLVIGTSVSILAAGDRED
                     CAATGNPDQSIAACARVIADDSETAANRVVAYKNRGHAYYNKKDYDGAIADYNEAIRL
                     DPSQVLTYHVVAYVNRARIYSDKKDYDRAIADYGEAIKLDPKLVTAFNLRGLAYLNKR
                     DLDSALADFNEAIKLNPNFTAAYNNRGLVHARRNDFDLAFAEYSEAIRRDPNAAFAYN
                     NRGLVYARRYDYANAIADYGQAIKNNHPNLAQVYSNRGLAHKALGLTEEAIADFHKAQ
                     SIDPSDRTSKAQLALISPGAAPAAAVSAATPATNGEIVATAMSRLSINLPATVVGIEA
                     VRKPLDDLGREPCDRLAIVKLGLALGNVGHRREAATAQLSFSAACGGHVPSLKSATSI
                     LLDLSDYAGATVAASELIKLEPFDASGYNLRALAYDRGGSSKKAIDDYLTTIELFGNK
                     ANLSSDIYFAVARNYEKLGQFCDAASSVETWAALNSNNNSGRTQAIIADYTAKGRCES
                     PGSRAEEVFTFPPQKNVVRLPVTVNGVRGTFILDTGATFVSFNQAFAQKAKVQIDQDS
                     KIRMYTANGMVDARRGRATTVQLRSLQAKDVAVIVHDNVPGSFGNGVDGLLGMSFLSR
                     FKVSIDTQSVRIANRDAKK"
BASE COUNT         1016 a         1531 c         1574 g         1186 t
ORIGIN      
        1 cccgccgtcg gttgcaagat cggatcaagg gggcgctcgg ccgcttgggc attgacgtcg
       61 ccgcgctcgg ggatctgacc gcggaaggtg cttcgagggt gccggacgtg acgcagacgc
      121 atccgcatat ccgctatcac tctttttttg cctcaggtcg ccagcatctc ttgctgccgg
      181 cgacttgcgc cctgctcctg ccaacgcacg agtacatccg cgcggccacc ggccaggaca
      241 acgacggctt ggtcacattg gactcagcac ggtatggcga atttcaagag ccgttctggc
      301 atggtgatca catcgacatt tgcggccaca acctcgacac cgccgatctg ggtctctttc
      361 aatttgacca ctttgcggct tacgacgcca tcatcagcgg gttgtagcgt tgcgccgcaa
      421 caggccgcgc tccttcatct ccgcccccag acacgcgacc gcaccagacc gaccacggcg
      481 caacaatcaa cctgaagaga tcgctcatcg caatgattat caaccgattc gcagctggcc
      541 gtcagccgtc ttcggtttgc ggtagagaca agtcgcgaag gaacgccagc atgcgcgaat
      601 cgatcataca ggttctggtc atgttttccc cgccagcatc ggttctacgg tagagggcaa
      661 ctctccgccc aaacattcaa tgacaacagg tgcctccgta atgcctccgt aatgtctcgg
      721 tactgaggtg aactcgccgc gccggcccca cggccggtgg gtcctcggtt caacggcctt
      781 cagcgcatcc ctatctttgc tgcgtttgcg cgcctaccaa ctagcaagct gcagcatatt
      841 ttttgtcgtc ttggccccgt cgcggccatc gaccgtgatg atacgaccgt cgcgatcaaa
      901 gacacgaacg gtcaacgttg cggccttctt gtcaatgtcg agacgagtga aattgtcttc
      961 ctgtgcatac ccaaaggagc ggtagtgcat gatcgcatcg gtaccgatca ctgggaacgc
     1021 gtctagctgg tccggcagtc gcgagttgtg gacatagtta ttggggtccc cgtcggcaaa
     1081 cgggaatggc caatagaatg ccgatgacgt gacggagaac gccttgaggt ccttgccatc
     1141 gttgccatca aactcaattt cagcggtgtt agagcagtgg atgtcgcccg cgaggaagat
     1201 aacgttctgg atcttgttct tgacgatgtg ctggagcagt gtgagacgcg tgttcggaaa
     1261 ggcgggccag ctgtcacttt cctctcgtcg ctttgtattc aggtcgaaca gcggatccgg
     1321 cggatcgccc acttcgtcct gatgaggaac cggggcgatc cgctcggtca tgtcgttcgg
     1381 cacgaatacg ctcgatgtca cgacgaattt cggcaccttc ccgcgcttgt tctgctgctc
     1441 ggtcagccag tcaaggagcc gctgcagctg gccaggatga ttggcgaggt cgagagaagg
     1501 ccgccctagc aggtggttgt cgtgcaaacc gggcaggtcg tccttgtagc gctgcgtgcg
     1561 tgtatcgagt acgaaggtcg gataaccggc gcactcgaac gtatagtaga gcagccggcc
     1621 ccacgtgcgc gggccgtggc tccactggta gctctgatag gcgccgatcg ccagattgaa
     1681 caactggtgc ctgcccggat cgtcgaggcg gtcctgggtc cagttatcct cgatttcgtg
     1741 gtcgtcgagg atcatgtaag tggtcgacct gcgcattagt tcgcgcagct tcggagcgcc
     1801 ataagccgcc acgtatctct gctgaaactc ctcaaacgta tcggcgcgca ttagcggcac
     1861 catgcggttg agcatgtcgg catagatttg gtcgccgcac atcacggtga agcgggctgc
     1921 cttgccgagt acgtcgctat cctcgaagtg ctggagcatc ggtccgaaga tccgatccgc
     1981 ctccttaatc ttccacaata aaccaggata gcggcatgat ccgagcagaa acgacatgtt
     2041 gtcggcgatg gtgtccggct tggggaaggt acggaaggtt gcttcgcact cttcggcttt
     2101 gagattggcc aactcattct tgatcttatc aatgtccggc agccgtttga ataattcagc
     2161 gtccgacaat gtcgaatcgt tgggcatagg atcatcgatc gtgagcgtac cgaggcgcac
     2221 cgtgtattcg gtatccgcca gcaatggctc ggcaatcgcg tctttcggag gcttgactgg
     2281 aaaaggcttg ccttgatcct cgtagtcatc gggataaaag ccgagttgca cgtctttgcc
     2341 aaggacgaac gtaccggtgc ggtcgtattc gcgctgcagg cggaaatacc aggcacggcc
     2401 gatctggctt ctgcgcggca caagtccaat cacgccaacg gtgcgccgga actcatcgag
     2461 attggatttg tgatccgctg ggtcacccgc acggatccaa atccggcagg tcgtgtcggt
     2521 agtagcgccg acaatcggcc cgagtccggg cacgcgtaaa ctcgccatga tcctcctctg
     2581 cgcggctcgc gaaccgccgc ccgcccatgc cgtcctcgac caccacgctt ggcggtacca
     2641 ttgccgcggt ctgttccaga taccaatcgc agcgtaatta cgaattcgcc atggacagga
     2701 ccttgtttga ccggcatatc atttattttg ctcattgcga gacgaaatag atcggaaagt
     2761 gggcagctca tttgatcacc tcgtcggcac ggccgagcag tacgggtttc cgagacattg
     2821 ttcgttacga tttctctatt tccccttctt taaatgcacc cggcgcctcg ggcgtctgct
     2881 gctcgcgagg tcggtgatcc gctagccccg gctcacttat ttttttgcgt cacgattggc
     2941 gatccgtacg gactgggtat cgattgaaac cttgaagcgc gacaaaaaac tcattccgag
     3001 aagcccgtcg acaccgttcc cgaatgaccc gggaacgttg tcgtggacga tgaccgcgac
     3061 atccttggcc tgcagcgagc gcagctgaac cgtcgtcgcg cgaccccgcc tggcatccac
     3121 catcccgttg gcggtgtaca ttcggatttt gctgtcctga tcgatctgca ccttcgcctt
     3181 ttgggcaaac gcctggttga acgatacgaa tgtcgcgccg gtgtcgagaa tgaaagttcc
     3241 tcgaacgccg ttgaccgtga ccggcaatcg gacgacgttt ttctggggcg ggaacgtgaa
     3301 gacttcctcg gcgcggctgc cgggcgattc gcatctgccc ttcgccgtat aatcggcgat
     3361 gatcgcctgc gttcggccgg aattattgtt tgaattcagt gcggcccagg tttcgacaga
     3421 ggatgcagcg tcgcagaact ggccgagctt ctcgtaattg cgcgcaacgg caaagtagat
     3481 gtcgctcgac agattggcct tgttcccgaa caattcaata gtcgtgagat agtcgtcgat
     3541 ggctttcttc gacgagccac cgcggtcata ggcgagggcc cgcaaattgt aaccgctcgc
     3601 gtcgaacggc tcgagtttga tcagttccga tgcagctacc gtcgcgccgg cgtagtcgga
     3661 caaatcgagc aaaatgctcg tggcactttt gagcgaaggg acatggccgc cgcaagcagc
     3721 cgaaaagctc aattgggcgg tcgcggcctc tcgcctgtgg ccgacatttc ccagcgcaag
     3781 tccaagtttg acgatcgcca gtcgatcaca tggttcgcgg ccgaggtcgt cgagaggctt
     3841 tctgacagcc tcgattccga cgacagttgc cggcagattg atcgataatc ggctcatggc
     3901 ggtggcgaca atctcgccat tggtcgcagg tgtcgccgct gatacggcgg cggccggtgc
     3961 cgcgcccgga gaaatcaagg cgagctgggc cttgctcgtc cgatcggatg gatcgatcga
     4021 ctgggcctta tggaagtcgg cgatcgcctc ctcggtaagg cccaaagcct tatgggcgag
     4081 gccgcgattg ctgtacacct gcgcaagatt cgggtgattg tttttgatgg cctggccgta
     4141 gtcggcgatc gcgtttgcgt agtcgtacct tctggcgtag acgagaccgc gattgttgta
     4201 tgcgaacgcg gcgttcggat cgcgcctgat cgcctcgcta tactcggcga aggcgagatc
     4261 gaagtcgttc cttctcgcat gaacgaggcc gcgattgttg tatgcagcgg taaagttcgg
     4321 atttagtttg attgcctcgt taaagtcggc gagtgcgctg tcaaggtcgc gcttgttgag
     4381 atatgcgagc ccccgtaggt tgaaggctgt cacaagcttt ggatcgagct tgattgcctc
     4441 gccataatcc gcgatcgcgc gatcgtagtc cttcttgtcg gaatagatgc gggcgcggtt
     4501 gacataggcg accacatgat aggtgagcac ctggctcgga tcgagcctga tcgcctcatt
     4561 gtagtcagcg atcgcgccgt cgtagtcttt cttgttgtag taggcgtggc cgcggttctt
     4621 gtaggccacg actcggtttg ctgcggtctc gctatcgtcg gcaatgacgc gagcgcaggc
     4681 ggcgatgctc tggtcgggat tgcctgttgc cgcgcagtcc tcccggtcgc cggccgcgag
     4741 gatgctgacg gacgtcccga taaccaggcc tgccgctgcg aggagctcga taccggttcg
     4801 gcctacacct tcgttgatgg tatgggtgat gaaatcacgc agtctcatct gggaccccgc
     4861 aaaatgggtt ttccgatcgt cagcatcaga cgggacaaag ggcgcctgcg ccccaggtca
     4921 cagccgcgcc atgatcgcgt ccgaggccga cgaaaaagcc catccagatg tgctgctaca
     4981 tgctgggctt aaaacacctg gcggcgtatc ttatcagagg tcggaacaat cctgtgtgag
     5041 ctaagtcacc ttggcttctc ccgtcaagat agatccctaa cgcatgtctg tcgatcgcct
     5101 gctgctcgta tggctcgccc ggctggttcc gacaacgttg gcggcattga cagtggttac
     5161 acccgaaacc gtaatccgtt gacagcgtgg cggctttcgg ggggttctgg cgctggaaat
     5221 caagctcgtg cggcggtcgg ccgactgtgc cgctggagat tcgtcaattg atccgccgca
     5281 tgagcccggc caaccagaca tcggcga
//
LOCUS       DATILV010000409         2218 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4439919, whole genome shotgun sequence.
ACCESSION   DATILV010000409 DATILV010000000
VERSION     DATILV010000409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2218)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2218)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2218
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4439919"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..192)
                     /locus_tag="VLJ17_09310"
     CDS             complement(<1..192)
                     /locus_tag="VLJ17_09310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23213.1"
                     /translation="MAAEQIDTQRRNKDSSMLSNPANVPRNASSRADILLETTAAAAP
                     RGKPIKERRGSRCCRAPGRE"
     gene            complement(212..1876)
                     /locus_tag="VLJ17_09315"
     CDS             complement(212..1876)
                     /locus_tag="VLJ17_09315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008974536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HSV23214.1"
                     /translation="MMHDQQPRSTSTFDYVVVGTGAAGSIVAARLSEDPGITVCALES
                     GPRDRHPYIHIPAGFIKIMFNEAYTWQFKTEPSPNVNGRSVIIPVGRTVGGSSSINGM
                     IINRGQADDFNNWAQRGNAGWGYADLLPYFKRFEQRIGEGDNLYRGRNGNIPVTDLDW
                     QHEICEAFIAGAAGLGIPRNPDYNGASQPGVGYLQRCIHKGLRRSAGRMYLLPAQKKS
                     GRIDLRVHARAFKIVFDGTKAVAVRYVDERSRNIHEVKARKEVIVSGGTVNSPRLLQL
                     SGVGSGRLLKSLGVEVIHDLPAVGENFRDHCSVRIVARAKNSKTINEITRGPALIGQM
                     LRWLTGRPSVIGVSPSLCYCFWKSDPNISGADLQVMFSPASYKDGFVGMLDDYPGMSC
                     GVWQHRPESIGYVRAKSTDIFVDPAIQPNYLSHEVDQRALVGGIGLARRLLRTPQLSR
                     FVDRETFPGDGVRTDDEVLHWARQYGGTVWHLVGTCRMGPATDTSSVVSDELRVHGLR
                     NLRVIDASVMPSMPSANTYSATMVIAEKGSDLIRGKAAPAPVALPA"
BASE COUNT          420 a          673 c          691 g          434 t
ORIGIN      
        1 ttcccggcca ggagcccggc agcaacgtga gccgcggcgc tctttaatcg gcttgccgcg
       61 cggcgcggcg gctgctgttg tttcaagcaa aatatctgcg cggctgctcg cattgcgagg
      121 tacattggcc ggattagata acatagatga atctttattg cgccgttgcg tgtcaatttg
      181 ttccgccgcc acctcatgcg ctcgagtgat gctacgccgg cagcgccacc ggcgccggcg
      241 cggctttgcc ccggatcagg tcggagccct tctcggcgat caccatggtt gctgagtagg
      301 tattggccga cggcatgctg ggcatcaccg aagcgtcaat cacgcgcagg ttccgcaggc
      361 cgtggactct aagctcgtcg ctgaccacgc ttgacgtatc ggtggcaggg cccatccggc
      421 aggtgccgac caaatgccac accgtgccac cgtactggcg agcccaatga aggacctcgt
      481 cgtcggtgcg tacgccgtca ccgggaaacg tctcgcggtc cacgaagcgc gacaactgcg
      541 gcgtcctcaa gagcctccgc gcgagcccga tgccgccgac cagcgcccgc tgatcgacct
      601 catgggatag gtagtttggc tggatcgccg gatcgacgaa gatgtcggtg gatttcgccc
      661 gcacgtatcc gatgctctcg ggccgatgct gccagacccc gcagctcata cccggatagt
      721 catccagcat gccgacgaag ccgtccttat agctcgctgg cgaaaacatc acctgaaggt
      781 cggcgccgct gatgtttgga tcggatttcc agaagcaata gcaaagtgaa gggcttacgc
      841 cgatcacact gggtctcccc gtgagccagc gcagcatctg gccgatcagc gcggggccgc
      901 gggtgatttc gttgatggtc ttcgaattct tcgcacgcgc cacgatgcgg acagagcaat
      961 ggtcgcggaa gttttcgccg accgccggca gatcgtgaat gacctcgacg ccgaggctct
     1021 tgagcagtct gccactgcca acgccggaga gttgcaagag gcgcggcgaa ttgacggtgc
     1081 caccgctgac gatcacctct ttgcgggcct tgacctcgtg gatgttccgg ctgcgctcgt
     1141 cgacatagcg aaccgccacc gccttcgtgc catcgaacac gatcttgaag gcgcgagcat
     1201 ggacgcgaag gtcaattcgc ccggacttct tctgcgcggg taggagatac atccggcccg
     1261 cgctgcggcg cagccccttg tggatgcatc gctgcagata gccgacgccc ggctgcgacg
     1321 cgccgttgta atcggggttg cgggggatgc cgagaccagc ggccccggcg ataaacgcct
     1381 cgcagatctc atgctgccaa tcgaggtcgg tcaccggaat gttgccgttg cggccccgat
     1441 aaaggttgtc accttcgccg atgcgctgtt caaatcgttt gaaatagggc aggaggtcgg
     1501 cgtagcccca gcccgcgttg ccgcgctgcg cccagttgtt gaaatcgtca gcctgaccgc
     1561 ggttgatgat catgccgttg atcgagctcg atccaccaac ggtgcggcca accgggatga
     1621 tgaccgagcg tccgttgacg ttcggtgacg gctcagtctt gaactgccaa gtgtaggctt
     1681 cattgaacat gattttgatg aagcccgctg gaatgtgaat ataggggtgc cgatcgcgcg
     1741 gaccggactc gagggcgcag acggtgatcc cggggtcttc tgacaggcgc gcagcgacga
     1801 tggagcctgc agcgccggtc ccgaccacca cataatcgaa ggtcgatgtc gatcgtggtt
     1861 gttgatcgtg catcatctcg atgtccgtac ctgtgcgtac cgcaagtcag atttgacagt
     1921 atcggtgatt gaggtcatcg agaacagccc ctattggtac aggatcgtgt tcgagtcacg
     1981 aggaaccgga attccggctg acggtctcgc gggactaccg acattgctgc ggcagccgcc
     2041 cgtgacccga agcgccactt gcacgaactg ctgcgcggct tagaatccaa gcggcttgct
     2101 cgcgacgaca aatggcatgc gggtctgtat tcattccggg gcacgaagca gatcggcgga
     2161 acctgcgcca aacctgacca agaattttag cgcagcaagc tccggggttt cacgccgg
//
LOCUS       DATILV010000410         3334 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4184300, whole genome shotgun sequence.
ACCESSION   DATILV010000410 DATILV010000000
VERSION     DATILV010000410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3334
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4184300"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..223)
                     /locus_tag="VLJ17_09320"
     CDS             complement(<1..223)
                     /locus_tag="VLJ17_09320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23215.1"
                     /translation="MAGPERWGSFPHREDRISRLGGAPGGVVSRPTNDAYDLYSIGGE
                     PHVSLQVDDLESEDLAELLRPDEKCHAVRG"
     gene            365..1741
                     /locus_tag="VLJ17_09325"
     CDS             365..1741
                     /locus_tag="VLJ17_09325"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HSV23216.1"
                     /translation="MAAGIPSIAWYRRTNEKKRADKRIRFLALHDALTGLANRAMFAE
                     KANEALERLAQNGEPFSILLLDLDRFKSVNDSLGHPIGDSLLKVVADRLRTRVRSTDL
                     VARFGGDEFAILQIGRKQPREEAVTLADRVREAIAAPYEIEGHQITIDTSIGITLAPE
                     HGIQFDQLLKRADLALYQAKYGGRGRYCYFESILEEKVNARVALEAELRNAVSREQLE
                     LRYQLAVEVATCRPCGAEALLRWHHPQRGLISPAAFIPAADEIGAITQIGEWVLRKAC
                     ADAAAWPSHTTVAVNLSPVQFRKGDLIGMVRSALADSGLAPERLELEVTESVLLKNNA
                     ENIATLHQLKDFGVSIVLDDFGTGFSSLSYLKMFPFNKIKIDRSFVNEVESSDECAAI
                     VSAVIGLGRSLNVAIVAEGVETKQQLSMLRAAGCTHAQGYLFGRPVLISQLSFNEGGF
                     VDDESRVA"
     gene            complement(1800..2981)
                     /locus_tag="VLJ17_09330"
     CDS             complement(1800..2981)
                     /locus_tag="VLJ17_09330"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-independent methionine synthase II
                     family protein"
                     /protein_id="HSV23217.1"
                     /translation="MFKASAGKTLPTSIIGSLPRPSWYTAVLGTKSFLEAMLHARYRE
                     QYEDAVSVHLRAQETAGLDICTDGDAHYDEEVGGMSWQSYPLTHMAGFNAVAEPAIYN
                     IGAVAYPRGHILHDYLEARVFPKIVGPVGPGNLQYAAMWKVAQRLTTKPVKFGTILPE
                     LLAASAVDSYYKDPVERTMALSEALNKELNDLADAGCPVIQMEEPQIHMVPVRGRAFG
                     KLDVQDLVGVFNKTVKGLRAKTEVWCHTCWGNPSQQRMFNEIQSYQPTLEALNQVDAD
                     ALTFETCSSGPGDLRAIGEVIKDKKVVIGVIDHHTLQVERPDQVAALIREALKNIPPE
                     RLIISSDCGMGREGMSRRHATYKMVAMVLGTNIVRKELGLPQVECLAADPRYSLTLTK
                     G"
BASE COUNT          683 a          949 c          980 g          722 t
ORIGIN      
        1 ctccgcggac agcatggcat ttttcatcag gtcgcagcag ctccgccaag tcttccgatt
       61 cgaggtcatc gacctgaagg gaaacgtgcg gctcacctcc gatggaataa agatcgtaag
      121 cgtcgttggt ggggcgcgaa acgacgccgc cgggcgcgcc gccgagacgg gaaatccgat
      181 cttcgcggtg cgggaaggaa ccccaccgct ctggcccggc cactattcag aggcttatct
      241 cccggtatca gtcgacggcg aaatcagggc ggtcgttgcc gcttatgtcg atctcgatga
      301 gcagcatgac cggttccgca atgccttcct gcttgctctc gccggcttgt gtctgctcgc
      361 catcatggcc gcaggcattc cgagtatcgc atggtatcgt cggaccaacg aaaagaaacg
      421 cgccgacaag cgaattcgct tcctggcgct gcatgacgct ttgactggtc tggccaatcg
      481 cgcgatgttc gcggagaaag cgaacgaagc attggaacga ttagcgcaaa atggtgagcc
      541 attttcaatt ttgctcctcg atcttgatcg cttcaagtcg gtaaacgatt cgcttggtca
      601 tccgattggc gactctctgc tcaaggttgt tgcggatcga ctgcggacac gcgtgcgcag
      661 tacagattta gtcgcccgtt tcggtggtga cgaattcgcg attctccaga tcggccggaa
      721 gcaaccgagg gaagaagcgg tcacgctcgc ggatcgcgtc cgcgaggcca tcgccgcccc
      781 ctatgagatc gaggggcatc agattacgat tgatacgagc atcggaatca ctttggcgcc
      841 ggaacacggt atacagtttg atcaactgct caaacgtgcg gatctcgcgc tctaccaagc
      901 caaatacgga ggtcgtggtc gatattgcta cttcgaaagc attctcgagg agaaggtgaa
      961 cgcacgggtc gcgctggaag cggagctgcg caacgctgta agccgcgagc agttggaact
     1021 acgttaccaa ttggcggttg aggttgccac ctgccgtccg tgcggcgcag aagctctgct
     1081 tcgctggcat catccgcagc gcggcctcat ttcgccggcc gctttcatcc cggccgctga
     1141 tgaaatcggg gcgattaccc agattggtga atgggttctg cgcaaggcat gcgccgatgc
     1201 ggcggcgtgg ccgtcacaca ctacggttgc cgtcaatttg tcgcctgtac agttccgtaa
     1261 aggcgacctg atcgggatgg tacgcagcgc gcttgcggat tctggcctgg cgcccgagcg
     1321 gctcgagttg gaggtgacag agtcggtgtt gttgaaaaac aacgccgaga acattgcaac
     1381 attgcaccaa ttaaaagact tcggtgtgtc gatcgtcctc gacgacttcg gaaccggatt
     1441 ttcttcgctg agctacctca agatgttccc gttcaacaag attaagatcg accgctcatt
     1501 tgtgaatgag gttgaaagta gcgatgaatg cgccgccatc gttagcgcag taatcggcct
     1561 gggacgcagc ctgaacgtcg ccatcgtggc tgagggcgtt gagacgaagc agcaattgtc
     1621 gatgttgcgc gcagcgggat gtacccacgc gcaaggatat ctgtttgggc gaccggttct
     1681 gatttcgcag ctttctttca acgagggcgg atttgttgat gacgagtcgc gagtcgcgtg
     1741 atcgcctcga aggaatgccg cttcataatg atgccgatca cccccgccgt cctggcattt
     1801 cagcccttgg tcagggttaa tgagtaccgc ggatctgccg ccaggcattc gacttgcggg
     1861 agtccgagct ctttgcgcac gatgttcgtg cccagcacca tggccaccat cttgtaggtt
     1921 gcatgccgcc ggctcatgcc ttcgcggccc atcccgcaat cggacgagat gatcagccgt
     1981 tcgggcggaa tatttttcaa cgcctcacgg atcaaggctg cgacctgatc tgggcgctcg
     2041 acctgcagcg tgtgatgatc gatcacgccg atgacgactt tcttgtcctt gatcacttca
     2101 ccgattgccc gcaggtcccc gggaccggac gagcaggttt cgaacgtcag cgcatcggca
     2161 tcgacttgat tgagcgcctc aagggtcggt tggtagctct ggatttcgtt gaacatgcgc
     2221 tgctgtgatg ggttgcccca gcaggtatga caccacactt cggttttggc gcgcaggccc
     2281 ttcacggttt tattgaagac gccgacgaga tcttgcacat cgagcttgcc gaacgccctg
     2341 ccgcgcactg gcaccatgtg aatctgcggc tcttccatct ggatcaccgg gcacccggca
     2401 tcggcgagat cgttcagctc cttattgagg gcctcgctca gagccatggt acgctcaacc
     2461 gggtccttgt agtaactgtc gaccgcggaa gcggccagaa gttccggcag gatggtgcca
     2521 aacttgaccg gctttgtggt caaacgttgc gccaccttcc acatggcggc gtattgcaga
     2581 ttacctggcc ccaccggtcc cacgatcttg ggaaagacgc gagcttcgag ataatcatgg
     2641 aggatgtgcc cgcgcggata ggcgacagcg ccgatattgt aaatcgccgg ctcggcaacc
     2701 gcgttgaatc cggccatgtg cgtcagcgga tagctctgcc agctcatgcc gccgacttcc
     2761 tcatcgtagt gcgcatcgcc gtcggtacag atatcgagcc cggcggtctc ctgagcacgc
     2821 agatgtaccg agactgcgtc ctcatattgc tcgcggtagc gggcatggag catggcttca
     2881 agaaagctct tggtgccgag aacggcggtg taccaggacg gccgcggcag cgaaccgatg
     2941 atggaggtcg gtagcgtttt tccggctgat gctttgaaca tctttctggg tcccccctga
     3001 tcgcacttat atattatata ttgtcctatc agaaacgctg gcgccagatg cgtggagagg
     3061 actcggcgat ccagcacaat ccctgcgccg accgatgaat tcactgcctg gtcgaaaatt
     3121 ttccctgccg agatacaaac aaattcccag ccaacccacg gtagggaatt tgccgcagcg
     3181 ccgcggaatt gctacgcaaa ttaacgccag cctgcatcgg cgccgaacga gaaaaatccc
     3241 tgcgatgttc cctgccgaca agaattggcg ggacaagaag tagtcggtcg gacggcaatc
     3301 cggcaagaac cgcgatggtt tcgcaatcca gagg
//
LOCUS       DATILV010000411         2488 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1631864, whole genome shotgun sequence.
ACCESSION   DATILV010000411 DATILV010000000
VERSION     DATILV010000411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2488)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2488)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2488
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1631864"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..586)
                     /locus_tag="VLJ17_09335"
     CDS             complement(<1..586)
                     /locus_tag="VLJ17_09335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HSV23218.1"
                     /translation="MNHDSYDDVYIRGILNTVKTIAMVGVSANTSRPSYFAFKYLLER
                     GYRVIPVNPGLAGRDLLGRTAYATVLDIPEPVDMIDLFRASQHVLPIVMQVLQMQPHP
                     RIIWMQLGVRNDEAAELAEANGLKVVMNRCPKIEYGRLSAEISWMGVNSRTLSAKRSK
                     LPGRGVQRMSLDRITMAGGATDAADRADRRDGGSR"
     gene            complement(670..909)
                     /locus_tag="VLJ17_09340"
     CDS             complement(670..909)
                     /locus_tag="VLJ17_09340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012255366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine rich repeat-containing protein"
                     /protein_id="HSV23219.1"
                     /translation="MIHRTALAFAILASATTFSAFAETFEERQACTPDAQNLCADEIP
                     DRERVYECLVRKVNQLNPACKKIISSSIAPSKSKK"
     gene            complement(1044..1883)
                     /locus_tag="VLJ17_09345"
     CDS             complement(1044..1883)
                     /locus_tag="VLJ17_09345"
                     /EC_number="4.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HSV23220.1"
                     /translation="MNKDKDLNPVATARTIPSDPVLRRETEGAVALLILNRPASRNSL
                     SEALLTELIDALAALGCDTSIRAVVIAAEGSAFCSGHDLRELTERRADPDGGRSFFTA
                     LWSLCSTVMMSVVRLPQPVIACVQGAASAAGCQLVASCDLAVAAAGATFATPGVNIGL
                     FCSSPMVALSRNVAPKYAMEMLLTGDALSAADALRIGLVNRVAPRGEERAEAMRLARD
                     IASKSAAAIRLGKKAFHTQIEMSLADAYAHASRVMVENMFDPDAKEGIEAFLAKRSPQ
                     WGG"
     gene            2132..>2488
                     /locus_tag="VLJ17_09350"
     CDS             2132..>2488
                     /locus_tag="VLJ17_09350"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007603483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HSV23221.1"
                     /translation="MNKAEEGKSQPAFSIAQLESFLRAEFPQVFNTTTGISIEEIWFG
                     GARVRQAFQQSFIRPGGTISGPTMMALTDFAMYLAVLAAIGPVPLAVTTNLTINFLRK
                     PGAADLLAEARLMKLGK"
BASE COUNT          476 a          735 c          779 g          498 t
ORIGIN      
        1 agcgcgagcc accgtcgcgc cgatcggcgc gatctgcggc gtcggtagcg ccgcccgcca
       61 tggtaatgcg gtcgagcgac atgcgctgca cgccgcgacc gggcagtttg gatcgcttcg
      121 cactgagggt gcgggagttc acgcccatcc aggaaatctc agcggaaagc cgaccgtatt
      181 cgatcttggg gcagcggttc atcaccacct tgaggccgtt tgcttcggcg agttccgccg
      241 cctcgtcatt gcgtacgccg agttgcatcc agatgatgcg cggatggggc tgcatctgca
      301 ggacctgcat gacgatcggc agcacgtgtt gggaggcgcg gaacaagtcg atcatatcga
      361 ccggttccgg aatatcgagg acggtggcgt aagctgtccg gccgagtagg tcccgaccgg
      421 ccaatccggg attgaccggg atcacgcgat agccacgctc caacagatat ttgaaggcaa
      481 aatagctggg gcggctggtg ttggctgata ctccaaccat tgcgatcgtc ttcacggtgt
      541 tgagaatgcc gcgaatatag acgtcgtcat agctgtcgtg gttcatcggc caccatgacg
      601 gatgtcctgg gcggagcacg gtgggcgcag gtaaatgcgg tatcgctcac cttccgcaat
      661 ccgcagtcgt cacttcttcg acttcgatgg cgcgatcgac gagctgatga tctttttgca
      721 cgccggattg agctggttca ccttgcggac cagacattcg tatacccgct cgcgatcggg
      781 aatctcatcg gcgcacaggt tctgggcgtc cggggtgcat gcctggcgct cttcgaaggt
      841 ctcggcaaac gcactgaacg tggttgcgga ggccaaaatg gcgaaggcga gtgcggtgcg
      901 gtgaatcatg tgcccctcct tacgtgtaag ttagcggttg gcgttggaac aagatttcga
      961 cgtcaatgaa agttcattgc gcccgtcaat gtggcgatct tcgatcggga tttgaattga
     1021 ttcgcaagcg cgcaccggcg tcatcagcca ccccattgtg gcgaccgctt ggcaaggaag
     1081 gcctcgatgc cttccttggc gtcggggtcg aacatgtttt ccaccatgac gcgggaggca
     1141 tgggcgtagg cgtccgccaa gctcatctcg atctgggtat ggaacgcctt cttgcccaag
     1201 cggatcgcag ctgccgattt agaggcgatg tcccgcgcga gacgcatcgc ctcggcgcgc
     1261 tcctccccgc gcggagctac gcggttgaca agtccaatgc gtagggcgtc ggcggccgac
     1321 agcgcgtcac cggtgagcag catttccatg gcgtacttcg gcgccacgtt gcgcgacagc
     1381 gccaccatgg gcgaggagca gaacaggccg atattcacgc cgggggttgc gaatgtcgcg
     1441 cccgcagctg cgaccgcaag atcgcagctg gcgacgagtt ggcaaccggc ggccgaggcg
     1501 gcgccctgca cgcaggcgat caccggctgt ggaagtcgca ccacggacat catcacggtg
     1561 ctacacaggc tccaaagcgc ggtaaaaaag ctgcgcccgc catccggatc ggcgcgccgc
     1621 tcggtgagtt cccgcaggtc gtgcccggag cagaacgctg agccttcggc cgcaatgacg
     1681 acggcacgaa ttgaggtgtc gcagccgagc gctgccagcg catctatcaa ttcggtgagc
     1741 agtgcctccg acaagctatt gcgcgaggcc gggcgattaa ggatgagcaa cgccacggcg
     1801 ccttccgtct cccggcggag gaccggatcg ctcgggatcg tcctggcggt ggcgacaggg
     1861 ttcaaatctt tgtccttgtt catttcgccg gacacttccg gcgacgtgcg ctttcggaac
     1921 ggcgtgaagc ctgttgctta ggccgcacga aggctagtcg cagtttcacc atcgccggaa
     1981 gtcataaaat ggactagcac gggtcgaccg gaaaatccgt cgacgaattg acatcggttg
     2041 tcacaatccg ctcatctgtg actttaccat cacaatttcc cttctaggaa accggttcgt
     2101 ctacccgtca tcgggatcgg agcgcgaggc gatgaataag gcagaagaag gaaaaagtca
     2161 gccggcgttt tcgatcgccc agcttgagag ttttctgcgt gcggaatttc ctcaggtgtt
     2221 caataccacc accggcattt ccattgagga gatttggttc ggcggtgcgc gggttcgcca
     2281 agcctttcag caatccttca ttcgcccggg tggcaccata tccgggccta ccatgatggc
     2341 gctcaccgac tttgccatgt atctcgcggt ccttgccgcg atcggaccgg tgccgctggc
     2401 ggtcacgacc aatcttacga tcaacttcct gcgcaagcct ggcgccgccg acctcctcgc
     2461 agaggcgaga ttgatgaagc tcggcaag
//
LOCUS       DATILV010000412         2707 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3676077, whole genome shotgun sequence.
ACCESSION   DATILV010000412 DATILV010000000
VERSION     DATILV010000412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2707
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3676077"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..182)
                     /locus_tag="VLJ17_09355"
     CDS             complement(<1..182)
                     /locus_tag="VLJ17_09355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018268011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSV23222.1"
                     /translation="MMAIAIFIAMYGYYSWTQLALEAYPDIADVTSQVITQAPGLAAE
                     EVEQQITIPLERELNGT"
     gene            complement(220..1407)
                     /locus_tag="VLJ17_09360"
     CDS             complement(220..1407)
                     /locus_tag="VLJ17_09360"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSV23223.1"
                     /translation="MKKLDNRRLTGRNIYLGVVLLLVGAGLGAAAYRTVEMLSERQVD
                     WRTAPAATISVPSFVRNGQQIEIPEGSPLRNKLTIEAVAEKKIQRTLVLPAVVEADPA
                     RLVKVLPPLAGRITQLEIQLGQLVESGQALAILESSDLRTAYADYDRAKLLLALATKT
                     RDRVRGLGKVGGIAEKEIQQAETDFLTADAEFQRAEARLNQIGAAADTANTSRVLTIS
                     SPISGSVIDLAVAPGAFWNDPNVPLMTVADLTTVWVTANVPEKDIALVAKDQRVEVSF
                     VAYPGEVFEGRVLFVSQVLDPDTRRAKVRIAFPNPEDRLKPAMFANVTFFTPAHNMPV
                     VPTTALVLKKDSNQAFVETAPWTFEPRLVKTGFQQGDLIVIQEGLKAGERIVARGGVL
                     LND"
BASE COUNT          573 a          769 c          782 g          583 t
ORIGIN      
        1 gtgccgttaa gctcccgctc cagcggaatc gtgatctgct gttcgacttc ttcagctgcc
       61 aagcccggcg cctgagtaat gacctgggac gtgacatcgg cgatgtcggg atatgcttcg
      121 agagcgagct gagtccagga ataatatccg tacatcgcga tgaagatggc aatggccatc
      181 atcaccaacc gcttcctcag ggcgaatccg acaatccagt caatcattga gaagcacccc
      241 gcccctggcg acgatgcgct cgccggcttt gaggccttct tggatgacga tcagatcacc
      301 ctgctggaag cccgtcttga ccagccgagg ctcgaacgtc cacggagcgg tctcgacgaa
      361 agcctgattg ctgtccttct tcaatacaag cgcagtggtc ggtacgaccg gcatattgtg
      421 tgccggtgtg aagaaagtga cgttggcgaa catggccggc ttcaaccggt cctccggatt
      481 ggggaaagcg atccggactt tcgcgcgacg cgtatccgga tcaaggacct ggctgacgaa
      541 gagcacccgg ccctcgaaga cctctccggg ataagcaaca aaactgacct cgactcgctg
      601 atcttttgcc accagcgcaa tatctttctc cggcacattg gcggtgaccc agacggtcgt
      661 cagatccgcg actgtcatga gcggtacgtt cgggtcgttc caaaatgcgc caggcgctac
      721 cgcaagatcg atcacgcttc cggaaatagg agacgaaatg gtcaagacgc gcgaggtatt
      781 cgcggtgtcc gcagcggcgc caatctgatt gaggcgcgcc tcggcacgtt gaaattcggc
      841 gtcagcggta agaaaatcgg tctcggcttg ttggatttct ttttccgcaa tgcctccgac
      901 cttgccgagc ccacgcaccc gatcgcgcgt tttggtcgcg agcgccagca atagcttggc
      961 gcgatcgtaa tccgcatatg ctgtgcgcag atcggaagat tccagaatgg caagcgcttg
     1021 cccagactcg accagctgcc cgagttggat ttcgagctgc gtgatgcgac ccgcaagcgg
     1081 cggcagcacc ttgacgagcc gcgccgggtc cgcctccacg acggctggga gcaccaatgt
     1141 gcgttgaatt tttttctccg ccaccgcctc gatcgtgagc ttgtttcgca gtggtgatcc
     1201 ttcgggaatc tcgatttgct ggccgtttct tacgaaactg ggcacgctga ttgtggccgc
     1261 aggagcagtg cgccaatcga cctgtctttc cgacaacatt tccacggtgc gataggccgc
     1321 ggcgccgagc ccggccccga ccaacagcag cacgacgccc aaatagatgt tgcgccccgt
     1381 tagacggcga ttatcaagct ttttcattag gcctcttcga tatctgacca atctgtcttg
     1441 ctcccgcaag cacagaatat ccatactttg tcatcgcgac atgcgtgtaa acaaagtgcg
     1501 ggtgttttcg gggcaccgcg gcgaggtcag gacgcgcaac atcgaattgt caagaaaact
     1561 ccatagcctc ttcatagtat tgacgatggc ggggcggatg catcaggttc ggctggttgt
     1621 cggccagcgg atcacccggc taccacacgt tcatgcaagc cgctgcgtca acatcttgtc
     1681 gctcagtgcc gcaatgagcc tgcgtagttc tgcatatcgg agcggccgcg ctttgagata
     1741 gcacacacgg tcttccattg cgccgagcac ctaaaagcgt gtcatcggtc ggacaattga
     1801 ggggcttggg gacccgttgc ccgttggctg tccccatttc tggagcacga tcgcctgact
     1861 taccaagtgg tgccgcgaac tgggtctgtt cttactcctc accgaacatt cacatcgcga
     1921 cgcgcgtggg tgagctttac gacggggcaa cgaaaaagct catgaacgag cagaacatgg
     1981 cggccgtcgc gctggcgttc ggcggcttgg ttgcactcgt aaccttcttt cactcctggg
     2041 gtagcggatg attacgagca gcgatggagt cagcgtacag gcggccgtcg aacctcataa
     2101 ggcgctctcc aagccgccct tgtgcaatcg cgtggaaatc atcagcctcg ccgggtggcg
     2161 ccccggaacg ctgcaagtga ttcgaaattc aaaatcgctg aacaatagcc cgataacggt
     2221 ttcaatttca ttggcttggc cggccaaaag gccgcgtcgc atcatcggtc ataaccgacg
     2281 tcaaggatac cgcgagtcaa ttagctgaag cgaaacgggc tttcgcatgc ggcccttgct
     2341 ctttgtcatt gaattgtcaa aaagctccgt aacttcttgc aaacgatcgg ctcttggtcc
     2401 ggtgtgtcct atgaagattg atatcgacga agctacggcc atttatgcga acgcgtgtcg
     2461 ggcttggtat gggaaaaatg ctgcgcgtgt cgtgacggag agattgcgag aattggtgaa
     2521 aagcggcgac gcagctggtg tggcggcgtg gtccaaagtt gcgcatcact tgtcgagatc
     2581 tgacggatgg aatcgacata gcagatcgca gagcaagctg tactgatcgg atcagcgcgt
     2641 gcgtaacgcg tggacgagcc gtttactgac cgctccctta tgggaaggcg aaggccgtac
     2701 ctgcgaa
//
LOCUS       DATILV010000413         5264 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4697543, whole genome shotgun sequence.
ACCESSION   DATILV010000413 DATILV010000000
VERSION     DATILV010000413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5264
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4697543"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(108..1505)
                     /locus_tag="VLJ17_09365"
     CDS             complement(108..1505)
                     /locus_tag="VLJ17_09365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003610162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6513 domain-containing protein"
                     /protein_id="HSV23224.1"
                     /translation="MADRILFLTGHLARARLERVLAGAGDLGFEWSIFDVGVKVAALM
                     TEAIIARRLKRPLEADRVIVPGRCRADLERLTKSFDVRFERGPDELKDLPAYFGRRGR
                     NLDLSRYDMRIFAEIVDACMLTVDQILERATTMRAAGADVIDLGCLPDTPFPHLEDTV
                     RALRASGFTVSVDSAATEELRCGGAAGANFLLSLTENTLDIAAETGAAAILVPAPHGD
                     VASLLRAAEAAERRGIAAILDPVIDPIHFGFTASLTRYTELRRALPRAEILMGTGNLT
                     ELTDADSCGVTAMLVGICSELHIRNLLVVQVSPHTRRTVQEHDAARRLMFAARADASL
                     PKDYGNALLGLHERRPFPNAPHEIAELAGQVKDDNFRIEVAEDGIHVYNRHGHHVGQD
                     AMSLYSKLGVEADGAHAFYLGAELMKAEIAWRLGKRYAQDESLAWGCAIDGPSDDLTR
                     LSDVGPTLQSSVPER"
     gene            complement(1498..2049)
                     /locus_tag="VLJ17_09370"
     CDS             complement(1498..2049)
                     /locus_tag="VLJ17_09370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013532041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavoprotein"
                     /protein_id="HSV23225.1"
                     /translation="MAELITPRWGWALTGSGHFFKECLAMIAGVENVDLFVSKAAAEV
                     VRMYGQEFNLPKSARIIRDTTASAAPVGAFYYGVYHTLVVAPATSNTVAKCVLGISDT
                     LVTNVFAQAGKCRVPTIVFACDTAPELETEAPKGMVKVYPRNIDLENTARLKLFEATL
                     VVETLDELRDGLTRRKRELTTDG"
     gene            complement(2486..3106)
                     /locus_tag="VLJ17_09375"
     CDS             complement(2486..3106)
                     /locus_tag="VLJ17_09375"
                     /inference="COORDINATES: protein motif:HMM:NF012899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23226.1"
                     /translation="MDSRGPIVVKLGGSFAFSARLRDWIAAIASCAGRAVIVPGGGLF
                     ADAVRAAQVQMGFDDPAAHHMGLLAMEQYGLAIKSLDEKLSLAETLDSIHCGLVDGRV
                     PVWLPSRLVLGAVDIPQSWNVTSDSLAAWLAGKIGAERLLLIKHIEPTGEAIRVADLT
                     ARNIVDKAFANFLAASGVPGFILGHSDFEAVAGAVNGYPVGIRIAA"
     gene            complement(3304..4485)
                     /locus_tag="VLJ17_09380"
     CDS             complement(3304..4485)
                     /locus_tag="VLJ17_09380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020173851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(5-formylfuran-3-yl)methyl phosphate synthase"
                     /protein_id="HSV23227.1"
                     /translation="MTLMLASVTGEEEAEIAVQEGADIIDLKDVAAGFGTVTPEVVRA
                     TVAAVAHRRPVSAVVGGLVDLERITVIASGLAEAGASYVKVGLPPDLRRGDCIQALAP
                     LARRTKMIGVMFADHGADDALIPLMAKSGFAGVMLDTALKTGARLLDHMDITALALFV
                     EQAQACGLTTGLAGSLEAPDIPRLLLLAPDVLGFRRALCVDHDRSARIDPGAVAAVRS
                     LIPTDSLKPHRGGEGASKVDYRVLAARGYVSEANKGEAATDGIFVRDFDLPVSVGVYL
                     HERAKPQNVRFNIEARIYRADRVAEDIRDVFSYDLITDSIRMIVAQEHIALMETLAER
                     VAALILTYPRVAGITVRIEKLDVGPGAVGVEIVRERPVEVAKVHHLYPAARLGNPEAA
                     T"
     gene            complement(4485..4982)
                     /locus_tag="VLJ17_09385"
     CDS             complement(4485..4982)
                     /locus_tag="VLJ17_09385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3280 domain-containing protein"
                     /protein_id="HSV23228.1"
                     /translation="MPISLAFAMALWCGPWAQAAERAVVVFDFEFVDTSLQGATYGAS
                     VEEQERLAWAGGELRKRLAQTGRFVVLDIAPLAAKVHAADLQSCGGCDAQWARELGAK
                     FAITGWVQKVSNLILNMNIAVRDADTGKLVAGMSVDMRGNTQESWSRALNYLVVNRLL
                     APGGL"
BASE COUNT         1076 a         1633 c         1561 g          994 t
ORIGIN      
        1 cgatgatcca ctcctcaccg tccgcaataa gtccgagcgg cgccaagtgg acaacgccga
       61 cagagtcggc ggtcgtcaca attgtttcgc ggatcatcgg catcggctca gcgctctggg
      121 accgaagatt gcagcgtggg cccgacgtcg gacagccttg ttagatcatc gcttggcccg
      181 tcgatggcac atccccaggc cagggactca tcttgcgcgt aacgcttgcc tagccgccac
      241 gcgatttccg ctttcatcaa ttcggcgccg agatagaagg cgtgtgcacc atcggcctca
      301 acaccgagct tggagtaaag cgacatcgca tcctgcccca cgtgatgacc atgacggtta
      361 tagacgtgga tgccgtcctc ggcgacctcg atgcgaaaat tgtcgtcctt gacctgtccg
      421 gcaagttcgg cgatctcgtg cggcgcgttg ggaaacggcc tgcgttcgtg aagcccgagg
      481 agtgcgttgc cataatcctt cggaaggctg gcgtcggcgc gcgcagcgaa catcaggcgc
      541 cgcgccgcgt catgctcctg aacggtgcga cgggtatgcg gactgacctg aacgacgaga
      601 agattgcgaa tgtggagttc tgagcagatg ccgaccagca tcgcggtcac tccgcacgaa
      661 tccgcgtcgg taagctctgt cagattgccg gtacccatga ggatttctgc ccgaggaagc
      721 gcgcgccgca actcggtata gcgggtgagc gaggctgtga atccgaagtg gatgggatcg
      781 atcacgggat caaggatggc ggcaattcca cgccgttcgg cagcctcggc cgcgcgcagc
      841 agggatgcca cgtcgccgtg aggcgccgga acgagtatcg cggcggcccc ggtctcggcc
      901 gcaatgtcga gggtgttctc cgtcaggctc agaagaaagt tcgcgcctgc ggcgccaccg
      961 caccgtaatt cctcggttgc tgccgagtcg acactgaccg taaagccgct cgcccgcagc
     1021 gcgcgaaccg tgtcctcaag atgggggaac ggcgtatccg gtaagcaacc gaggtcgatc
     1081 acgtcggcac cggccgcacg catcgtggtg gcgcgctcaa ggatttggtc gaccgttagc
     1141 atacaagcgt cgacgatttc cgcgaaaata cgcatgtcgt agcgcgagag atcgagattg
     1201 cggccacgtc tgccgaaata ggcgggcaga tccttcaatt catcggggcc gcgctcgaac
     1261 cggacatcga atgatttggt gaggcgctcg agatcggcgc ggcagcgacc cggcacgatg
     1321 acgcgatcgg cttcaagggg ccgcttcagg cgccgcgcga taatggcttc cgtcatcagg
     1381 gcggcaactt tcacgccgac gtcgaagatc gaccactcga acccaaggtc gccagcgccc
     1441 gcgaggaccc tttccagcct cgcccgcgcg aggtgcccgg ttagaaatag gatacggtca
     1501 gccatccgtc gtcagttcgc gtttgcgccg ggtgaggccg tcccgcagtt cgtcaagtgt
     1561 ttcaaccaca agggttgcct cgaacaattt cagccgcgct gtattctcca gatcgatgtt
     1621 gcgcggatag accttgacca tgcccttggg tgcttcggtc tcaagctcgg gtgcagtatc
     1681 gcaagcaaac acgatggtgg gaacgcggca tttgccggct tgggcaaaga cgttagtgac
     1741 gagcgtgtcg gatatgccaa gcacgcattt cgcaaccgtg ttcgacgttg cgggcgcaac
     1801 caccagggta tgatagacgc catagtagaa cgcaccgacc ggcgcagcgc tcgcggtcgt
     1861 gtcgcggatg atgcgggcgg acttcggcaa gttgaactcc tgcccgtaca tgcgcacgac
     1921 ctcggccgcc gctttactga cgaacaaatc cacgttttcg acgccggcga tcatcgccag
     1981 gcattccttg aagaaatgcc ccgatccggt cagcgcccaa ccccagcgcg gagttatcag
     2041 ttcagccatc ggataagtct agaacacccg gtggctctgt gcgcaagccg ctttgtcgca
     2101 agttggcaag cggcagcagg accggacgag gatggaatgg aggctctaca gcagggctgt
     2161 tgtgctctcg tgtttgtggt cgcgcaccgg tgaggagagt gatgtgcctc tcgacatcct
     2221 catctattac gccgacgtgc cttgtgccaa cagtaaattc gacgaaattg taaagacgag
     2281 cgcaatcatt caacagaccc ttccttcgac agcgcccttc gcgcaagcaa atccattcca
     2341 agatcttctt cgaaatgcct gaaggtcaac ccgaaatgga tatggacttc gatttcgaat
     2401 caaagtcagg tggtcgagaa agggcgccgc gtattgaaag aggaccatgc tttccatgcc
     2461 tcggattgac gcgaatcaag ccgacctacg ccgcaattcg gatgcccacg gggtatccgt
     2521 tcacagcgcc agcgactgcc tcgaagtcgc tgtgaccgag aatgaatccc ggaacaccgc
     2581 ttgccgctag gaaatttgca aaggccttgt ccacgatatt gcgcgccgtc aagtccgcca
     2641 cgcgaatggc ttcgcccgtc ggctcgatgt gtttgatgag cagcaatcgc tcggcgccga
     2701 ttttgcccgc gagccacgcc gcaagactat ccgacgtgac gttccaggac tgcggaatat
     2761 cgacagcgcc caatacaagg cgtgacggaa gccaaaccgg aacccggcca tcgacgagac
     2821 cgcaatggat tgaatcgagc gtctcggcga gcgacaactt ttcatcgagg cttttgatcg
     2881 ccaagccgta ctgttccatc gcgagcagtc ccatgtggtg cgctgcggga tcatcgaagc
     2941 ccatttgcac ctgcgccgcg cggaccgcat ccgcgaacag accgccgccc ggtacaatga
     3001 cggcgcggcc cgcacagctg gcgatcgctg cgatccaatc tcttaggcga gccgagaacg
     3061 cgaagcttcc gcccagcttg acgactatcg gcccacggct atccattcag agcatatcct
     3121 cggtcatgtt gagtcatttc cgggaatcat ggcggcattt gtgccggcca tccacgtcct
     3181 gctcgctaag ccgcagcagg aaagacttcg atgcccgcga agacggggtc cgggccgcgt
     3241 gacgcggcgg cgtgtctctg cgcggccatg actccaggtg gctccatctc aacgcaatag
     3301 ggtctaagtt gcggcttccg gattgccaag tcgtgcggca ggatagagat gatgcacctt
     3361 cgccacctcg acggggcgtt cgcgcacaat ttcgaccccg accgcacccg gaccgacgtc
     3421 gagcttttcg atcctcaccg taatgccggc gacccgtgga taagtcagga ttagtgccgc
     3481 aacccgttca gccaacgttt ccatcagcgc gatatgctcc tgcgccacga tcatccggat
     3541 cgaatcggta atcaggtcgt aggagaacac gtcgcgtata tcttcggcca cgcgatcggc
     3601 gcggtaaatt ctcgcctcga tattgaagcg cacattttgc ggcttggcgc gttcgtggag
     3661 ataaacccca acgctgaccg gtagatcaaa atcgcgtacg aaaataccat ccgtcgcggc
     3721 ttctccctta ttggcctcac tcacgtatcc gcgcgccgcc agtacacgat aatcaacctt
     3781 tgaagcccct tcgccaccgc gatgcggctt aagcgaatcg gtcggtataa gggagcgcac
     3841 ggccgcaacc gcgccgggat cgatccgcgc gctgcgatca tgatcgacgc agagagcgcg
     3901 ccgaaacccc agcacgtccg gcgccaacag taagagacgg gggatgtctg gtgcctcgag
     3961 cgagcccgct agaccggtcg tcaagccaca agcttgagcc tgctcgacga agagagcgag
     4021 cgcggtgatg tccatgtgat cgagaaggcg cgcgccggtc ttgagtgccg tgtccagcat
     4081 gacaccggca aatccactct tcgccatcaa aggtatcagc gcatcatcgg cgccgtggtc
     4141 ggcgaacatg acgccgatca tcttcgtcct gcgtgcgagc ggcgctagcg cctggatgca
     4201 gtcaccgcgc cgaagatccg gcggtaaccc gactttgacg taacttgcgc cggcctctgc
     4261 cagccctgac gcaatcacgg tgatgcgctc gaggtccacc agtccgccaa cgaccgcgct
     4321 gaccggccgc cgatgcgcga ccgccgcgac ggtcgcccgc accacctccg gcgtgaccgt
     4381 gccgaacccc gctgcgacgt ccttcaggtc gataatatcg gcgccttcct gcaccgcgat
     4441 ctcggcctcc tcctcgcccg tgacgctggc cagcatgaga gtcatcacaa gcctcccgga
     4501 gcgagcagac ggttgaccac taggtagttg agcgcgcgcg accacgattc ctgcgtgttg
     4561 ccgcgcatgt ccacactcat gccggcgacg agtttgccgg tgtcagcgtc acggaccgca
     4621 atgttcatgt tgagaatcaa gttcgagact ttttgtaccc atccggtaat cgcaaacttc
     4681 gccccgagct cacgggccca ttgcgcatcg cagccgccgc aactttgcag atcggcggca
     4741 tgcactttgg cggcaagcgg tgcaatatcc aataccacga accgtccggt ctgcgccaag
     4801 cgcttgcgca gttcgccccc ggcccaggcg aggcgttctt gctcttcgac gcttgcaccg
     4861 taggttgcgc cttgaaggct ggtgtcgaca aactcgaagt cgaacaccac gacggctcgt
     4921 tcggcggcct gcgcccaagg accgcaccaa agggccatgg cgaacgccaa cgagatcggc
     4981 attttgcaca tgagcgaatt tgttgcccct ttttgatctg ctcggcagaa ggtcaaatca
     5041 ggtcgctaaa gtactttaga tagacggtgt ttcaagttgg attttccgtt acaatgacga
     5101 caaggaagcg caagggtaac gtgacagggc aaaacccgtg gctgccaatt cgtcgtcgcc
     5161 gggcttgtct cggcgatctc gatcgggacg gcacagtgct gctattatcg ggatggccgg
     5221 gcaggtggcc cgtagccccc attgagtgaa gcgaaatgcg ggag
//
LOCUS       DATILV010000414         4151 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4185027, whole genome shotgun sequence.
ACCESSION   DATILV010000414 DATILV010000000
VERSION     DATILV010000414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4151
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4185027"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..910)
                     /locus_tag="VLJ17_09390"
     CDS             complement(<1..910)
                     /locus_tag="VLJ17_09390"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSV23229.1"
                     /translation="MSDLTEEQRMMRQSCRDFVDDVVIPFIRRNWQREWDMKPENRLP
                     NEILAAADRIGIRTLGVPEEFGGVELDPAREVQSFAIIAEEIARGDSGLADKLVQNWK
                     VAVLLRNIAPRHLQERWFARLVADPQFLLAHCLTEPRGASDRWLPYDVPEAAMQTRAV
                     RTSGGWLINGRKQFISNGYDAGLYVVYANTDPTVGMTKGTSSFLVPRDTNGLIVARCN
                     ETLGCRFMNNGELVFEEMFVPADHLLVEGSALGKAGVYFQPGKVIQAAKNLGVGVRAF
                     EVTADYVQNYTQGGRILIRHQAVALRL"
     gene            1168..2100
                     /locus_tag="VLJ17_09395"
     CDS             1168..2100
                     /locus_tag="VLJ17_09395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23230.1"
                     /translation="MNTSDIRGLIAVDKMGGKVIFLDPVSYATTLVLDDFERVPHELL
                     VIPKSFTAYVPIFGDGIHGRNPNPGHLLSVVDLGKRAHVADIDLSPFVAPHGLQVGPD
                     GLLYITCENSGVVALVDLGERKMVGGIETGSINSHRLVIDPSGRWLYTENEEDASISV
                     IDLPGRKLVRHVATPHPLAGLAISPNGKYLVAVDDQEPSLFLIDTASFAIIRTVALVE
                     VPEPAQIARYSPDGQILLVTSLRSATATVMDASFDHQTTLTVGQQPMDGAFRGRFLFI
                     ACQGDGTVHVIDLVTRQVSQQFAAGVGCETLAFF"
     gene            2143..2856
                     /locus_tag="VLJ17_09400"
     CDS             2143..2856
                     /locus_tag="VLJ17_09400"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HSV23231.1"
                     /translation="MPERNISGLDEARRLLGNCGLFRGLKIDERSAIINRARIRNVTA
                     GERIFSIGEPGDYMAAVLTGTIRITVPSPHGRELLLAILEAGELFGEIALLDGKERTA
                     DATANTASVLAILDRHEVLSFLERNPALWLRIVEILCDRIRHTDLQLAEVALLRLPAR
                     LARAILRIASSDPSLADEDGHFHIQLTQQDLANMVGATRESVNKCLSAWQRQGLVHID
                     GGQIVVPDRSRLESLVQLI"
     gene            complement(3336..>4151)
                     /locus_tag="VLJ17_09405"
     CDS             complement(3336..>4151)
                     /locus_tag="VLJ17_09405"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HSV23232.1"
                     /translation="AFSQYLAPALVEQVVRNSGRLQLGGQTREISCLFTDLEGFTNFA
                     ERAPAGQLVTILNGYLDSLCSIAMDHGGTVVKLIGDAVHVIFNAPVDQPDHAVRAVAC
                     ARAMDAFAVQFSDEQRRRSIPFGSTRIGVNTGQAVVGNFGGNRRFDFSAYGDTVNTAA
                     RLENANKKLGTRICIARSTVEHCAPETFRPIGSVVLKGKTRPVDVYEPINGSVDDLPW
                     LSLYLKAFSAFAAGSSDGREQMLAYAARHPEDPIGRLMARRITEGDSTTRVFI"
BASE COUNT          805 a         1199 c         1231 g          916 t
ORIGIN      
        1 caagccgcag cgccaccgct tggtgccgga tgaggatgcg ccccccttgg gtgtaattct
       61 gcacgtagtc cgccgtgacc tcgaacgctc gcactcccac gccaaggttt ttggcggcct
      121 ggatgacttt cccgggctga aaatagacgc cggccttgcc gagcgcagag ccttcgacca
      181 gcagatgatc ggcgggcacg aacatctcct caaataccag ctcgccattg ttcatgaaac
      241 ggcacccgag ggtctcgttg cagcgtgcca cgatgaggcc gtttgtatcg cgcggcacca
      301 ggaaactcga cgtgcctttg gtcatgccga ccgtaggatc ggtgttggcg tagaccacat
      361 agagcccggc gtcgtaaccg ttggaaatga actgcttgcg gccgttgatg agccatccgc
      421 cggaggtccg cacggcgcgg gtctgcatgg cggcttcggg tacgtcatac ggaagccaac
      481 ggtcggacgc gccgcgcggc tcggtgaggc agtgggcaag cagaaattga gggtcggcaa
      541 ccaggcgggc gaaccatctc tcctggagat gacgcggcgc gatattgcgc agcagcaccg
      601 ctaccttcca attctgaacc agcttatcgg ccagcccgga atcgccgcgc gcgatctctt
      661 ccgcgatgat ggcaaagctt tgcacctctc gcgccgggtc gagctcgaca ccgccaaatt
      721 cctccggtac cccgagggtg cggatgccga tgcggtcagc ggctgcgagt atctcgttcg
      781 gcagccggtt ctccggtttc atgtcccatt cgcgttgcca gttgcgacgg atgaacggga
      841 tgactacgtc gtcgacgaag tcgcgacagc tctgtcgcat catacgttgt tcttcggtga
      901 gatcgctcat atgcgtcctc catcggccaa gttcatgtcg cacagctgcg gtggatattc
      961 gaggttttgg ggcgagggcg cagggatgct gcatcagctg gtcctatggt tcgcctccca
     1021 ttgagacgcc gttcgatcca acctaggctt ctaccagcac cccgcccccc tgggagacaa
     1081 ttgcgtgatc gaaacaaaat tgtccgctcc cgacgcagct cccccccgcg gtgtcgctgc
     1141 cgttgcggcg gtcgcgaggc atgaacgatg aatacatccg atatccgcgg gctgatcgcg
     1201 gtcgacaaga tgggcggcaa ggtgattttc ttagaccctg tcagctatgc gacgacgttg
     1261 gtcctcgatg acttcgaacg cgtgccgcac gaacttctgg ttataccgaa atccttcacc
     1321 gcctatgtcc cgatttttgg cgacggcatt cacgggcgca accccaaccc cgggcatctc
     1381 ctctcagtcg tcgacctagg aaagcgcgcg catgttgctg acatcgacct ttcccccttt
     1441 gtggcgccac acggcctgca ggtcggtccg gacggcttgc tctacatcac ttgcgagaac
     1501 agcggcgtgg tcgcgcttgt cgatctcggc gaacgcaaga tggtgggcgg tatcgagacg
     1561 ggctcgatca actcgcatcg cctcgttatc gatccctcgg ggcggtggct ctacacggaa
     1621 aatgaggaag atgcttcgat ctccgttata gatctaccgg gacgcaagct ggtacggcat
     1681 gtcgcgacac cgcatccgct cgccggcctt gcgatttcgc ccaacgggaa gtatctggtc
     1741 gccgtcgacg accaggagcc gtcgttgttc ctgatcgaca ccgcgagctt cgcaattatc
     1801 aggacagtgg cgctcgttga ggtgccggag ccggcgcaga tcgcacgcta tagtcctgat
     1861 gggcaaattc tcctggtcac gagcttgcgg agcgcgacgg ccacagtgat ggacgcatcg
     1921 tttgatcatc agaccacgct gacggtcggc caacagccga tggatggtgc ctttcgtggg
     1981 cgctttctgt ttattgcttg tcaaggcgac ggcaccgtcc acgtcatcga cctggtgacc
     2041 cgacaagtct cgcagcagtt tgccgcaggg gtcggttgcg agacgctggc cttcttttga
     2101 tccaagggca acgatcccat agccgcaata tgagttgttg aaatgccgga gcggaacata
     2161 agcggactgg atgaggcccg gcggctgcta gggaactgtg gcttgtttcg ggggctcaaa
     2221 attgatgagc gcagtgctat catcaatagg gcccgcatcc gtaatgttac ggcgggcgag
     2281 aggatctttt ccatcggcga gcccggcgat tatatggcag cggtgctaac cggcacgatc
     2341 cgcatcactg taccgtcacc ccatggaagg gaactattgc ttgctatcct tgaagcgggc
     2401 gaactgtttg gcgagatcgc actgttggac ggcaaggagc gaaccgctga cgcaaccgca
     2461 aataccgcaa gcgttctcgc aattttggac cggcatgagg ttctgtcttt tcttgagcga
     2521 aatcccgcgt tatggctaag gatcgttgag atcctatgtg accggatacg ccataccgac
     2581 ttgcaactgg ctgaggtcgc tttgctgcgg ctgcctgcgc gccttgctag ggcaattttg
     2641 cgcatcgcga gcagcgatcc tagcctggcc gacgaggacg gacactttca cattcagctc
     2701 acacagcaag accttgctaa tatggtgggc gcgacgcgag aatccgtcaa caaatgcctt
     2761 agcgcatggc agcgtcaagg gctcgttcac attgatggag gacagattgt ggtgccagat
     2821 cgctcgcgcc tggaatcact ggtgcagttg atttgatcgc gtcgccacac cgccgactcg
     2881 caagacgatt gcgaatttag ttgacggaat ccgatagagc cgttgtccgc ggaccaacag
     2941 ttcccgatta gacatggtca ttgacgcatt tttttagaca tggtcattga cgcatttttt
     3001 taaaaggtgt gacctccgtc acaggtgcac cttgttgtac tttgctagtt tgcctgtgtt
     3061 ggtcgaagca aggggcacaa acattgcgtc cagccttggt ccgtatgcgt cgccttattc
     3121 ccggccggcg ttcctgcggc ttaacattcg ttcttcgtac gattaggcgc aggttttttg
     3181 agtattcggg gtcgctccaa tccggtgcat ggtcgagcac gtggctgttt cgcgaaccca
     3241 atcgattttt cgggttcgat gctgtcgact gggcgctgct gtgcgcggga gtgctaattg
     3301 gtctactcat attgttcgtt tgacgtgatc ctgcctcaga tgaacacgcg cgtcgtcgaa
     3361 tcgccttcag ttattctacg tgccataagc cgtccgatcg ggtcttcggg atggcgcgct
     3421 gcgtaagcaa gcatttgctc gcgcccgtcg ctggaaccgg ccgcaaaagc cgaaaacgcc
     3481 ttgagataca gtgacagcca cggcaaatcg tcgacggaac cgttgatcgg ttcatagacg
     3541 tcgaccggcc tggtctttcc cttcagcaca actgatccga tcgggcggaa cgtctcgggg
     3601 gcgcaatgtt ccactgtact tcgcgcgatg catatgcgcg tcccaagttt cttgttggca
     3661 ttttccaggc gggctgcggt attgaccgta tcgccgtaag cggaaaagtc gaagcgacga
     3721 ttgccgccga aatttccgac gaccgcttgc ccagtgttga cgccgatccg tgtcgatccg
     3781 aacggaatgc ttcttctgcg ctgctcatca ctgaattgca ccgcaaatgc atccatagcg
     3841 cgcgcgcagg cgacggctcg aacggcgtgg tcgggttgat cgacaggcgc attgaaaatg
     3901 acgtgtacgg catcaccgat cagcttcacg acggtcccgc cgtgatccat ggcgattgag
     3961 cagagagaat cgaggtagcc attgagaatg gtgacgagtt ggcccgccgg agcccgttcc
     4021 gcaaaattcg taaagccctc caggtcggtg aacaggcaac tgatttcgcg cgtctggccg
     4081 ccaagttgga gccgcccgga attgcgcacc acctgttcta ccagagctgg cgcgagatat
     4141 tggctgaagg c
//
LOCUS       DATILV010000415         5940 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_868138, whole genome shotgun sequence.
ACCESSION   DATILV010000415 DATILV010000000
VERSION     DATILV010000415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5940)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5940)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5940
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_868138"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..171
                     /locus_tag="VLJ17_09410"
     CDS             <1..171
                     /locus_tag="VLJ17_09410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020051394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HSV23233.1"
                     /translation="IQLADNPGRHEPGTGEINYPFLLQFIDKLGYQGWVGCEYKPAKT
                     TMEGLGWARPYL"
     gene            222..1127
                     /gene="glxR"
                     /locus_tag="VLJ17_09415"
     CDS             222..1127
                     /gene="glxR"
                     /locus_tag="VLJ17_09415"
                     /EC_number="1.1.1.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008679 - 2-hydroxy-3-oxopropionate
                     reductase activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046487 - glyoxylate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxy-3-oxopropionate reductase"
                     /protein_id="HSV23234.1"
                     /translation="MSKVGFIGLGIMGAPMAGHIRAGGHELFVYDVKPAPKSLTDQGA
                     VACSSGKEVAEKAEIIIIMVPDTPHVAAALFGENGVASGLSKGKTVVDMSSISPIETK
                     RFAQKIEALGCQYLDAPVSGGEVGAKAASLTIMVGGSENAFNNVKPLFDLMGKNVTLV
                     GGNGDGQTTKVANQIIVALNIEAVGEALLFASRMGADPAKVRAALMGGFAASRILEVH
                     GERMVKRTFDPGFRIELHQKDLNLALQSAKALGLSLPNTATAQELFNACVAHGGKAWD
                     HSALVRALEIMANHEIGQKSPAMLD"
     gene            1238..2530
                     /locus_tag="VLJ17_09420"
     CDS             1238..2530
                     /locus_tag="VLJ17_09420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007558516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HSV23235.1"
                     /translation="MDTPRDLLRRMFDAAINAAQPERCIPPHLPESPRGRMIVIGAGK
                     ASAAMAKAVEDHWPGELTGLVVTRYGYGVPCKRIEIVEAAHPVPDAAGIDAARRIQNL
                     VAGLTADDLVLCLISGGGSSLLVAPLDGLTLEDKQAVNRALLKSGASISEMNSVRRHL
                     SAIKGGRLAAGCHPAKVVTLLISDVPGDNPMDVASGPTVPDPTTCADALAIIKRYGVE
                     VPAEVHRILETGGGETVKPGDYRLAGIDTRMVATPQMALEAAARVAQEAGISGAILGD
                     SIEGEARDVAKVMAGIALQVAVHGQPFQPPCILLSGGETTVTVRGQGRGGRNVEFLLS
                     LGIALDGHPGIHAIAGDTDGVDGQEEIAGAYLSPDSLARAWTKGIRPKDSLANNDGHG
                     FFEALGDSVVTGPTLTNVNDFRAILITDEARSTAVASR"
     gene            2536..3948
                     /gene="pyk"
                     /locus_tag="VLJ17_09425"
     CDS             2536..3948
                     /gene="pyk"
                     /locus_tag="VLJ17_09425"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HSV23236.1"
                     /translation="MRRHRNAKIVATLGPSSSEATTIRALFDAGADVFRLNFSHGSQE
                     QHKERLDIIRGIERETGRPIAVLLDLQGPKLRVGTFAHGPVELSAGAAFRLDMDPTPG
                     DATRAPLLHPEIFAALKPDTDLLLDDGKIRLRVESYGRDFAATRVTMGGLLSDRKGVN
                     VPGVILPISIITEKDRKDLEFGLELGVDWIALSFVQRPQDLEEARALIKGRAAIMSKL
                     EKPAAVECLDEIVALSDGVMVARGDLGVELPAEHVPPIQKRMVRACRKAGKPVIVATQ
                     MLDSMVNSPVPTRAEASDVATAVYDGADAVMLSAESASGKYPVEAVQMMNRIITQVES
                     DPHYRDVIEASHTPAEATVPDAIFCGMRRVAGLLRVAATVTYTSSGYSTLRAARERPS
                     APIVSLTPDIRTARRLALAWGVHSVHTHDVKDVPEMVANACQTALREEFARPGDMIVI
                     AAGMPFGIAGNTNLLRVAQI"
     gene            4067..4858
                     /locus_tag="VLJ17_09430"
     CDS             4067..4858
                     /locus_tag="VLJ17_09430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007636532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HSV23237.1"
                     /translation="MLLKKLLLLILATVSLAAASPSAMADELEDIIQAGSIKIAVPAD
                     FPPFGSVGKTGEVEGYDVEVARLVARDLGVKLQLVPLTSPNRVPYLLTGKVDLVISSL
                     GANPERAKVIAFTDAYGPFYAGIFGDAKAQLKSAPDLAGKTVGVTRGTIEDAELARLA
                     PNTATIQRFEDNNATLSALASGKVDLIATGSAAAGAFSQKNPGKAEKKFVLRDSPVHI
                     GVRKGEPDLVAWLNVFIHYHQKPGGELDALAQKWLGESLAGLPRF"
     gene            4920..>5940
                     /gene="eno"
                     /locus_tag="VLJ17_09435"
     CDS             4920..>5940
                     /gene="eno"
                     /locus_tag="VLJ17_09435"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000103948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004634 - phosphopyruvate hydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HSV23238.1"
                     /translation="MAKIKDIRGLEILDSRGNPTVAATVVLDSGASGHAAAPSGASTG
                     TREAVELRDNDLKRYGGKGVMTAVSHVNGELRNALIGRDAADQASIDHTMIELDGTRN
                     KSRLGANAILAVSLGVAKAAAQEAGAPLYRYLAKSKAGKLQIPVPMMNILNGGVHADN
                     NVDMQEFMILPVGAPSFREALRYGVEIFHTLKAVLRAQGMSTAVGDEGGFAPDLPSNE
                     AALETILEAIAQAGYTAGKDVYLGLDPASSEFYQGGRYVLAAEDKRLTSEEFVDYFAT
                     WATQYPILSIEDGMAEGDWDGWTLLTQRLGDRVQLVGDDLFVTNTEILQQGIDRGVAN
                     SVLVKL"
BASE COUNT         1160 a         1862 c         1870 g         1048 t
ORIGIN      
        1 attcagcttg ccgacaaccc tggccgtcac gagcctggca cgggcgagat taattacccg
       61 ttcttattgc agttcatcga taagctgggc taccaaggct gggttggttg cgagtacaag
      121 ccggcgaaga cgaccatgga aggactggga tgggcgaggc cttacctatg agtcgtttgc
      181 aagtcgcgac tgcgaaccct accgattaga aggagtaagg catgagcaaa gtcggtttca
      241 tcggtcttgg catcatgggc gccccgatgg cggggcacat ccgcgcgggc ggccatgaac
      301 tctttgtcta cgacgtcaag cctgcaccca agagtcttac tgaccaaggc gcggttgcat
      361 gcagctccgg gaaggaagtg gcggagaagg ccgagatcat catcatcatg gtgcccgaca
      421 ctccgcacgt ggcggcggcg ctattcggcg agaacggcgt tgcgagcggg ctctccaagg
      481 gcaagaccgt ggtggacatg agttccatct cgcccatcga gaccaagcgg ttcgcacaga
      541 agatcgaggc gctcggttgc cagtacctgg atgcgcccgt ttccggtggt gaagtgggcg
      601 ccaaggcggc gtcgctcacc atcatggtag gcggatcgga aaatgcgttc aacaacgtca
      661 agccgctctt cgatctcatg ggcaagaacg tgacgttggt cggcggcaac ggcgacggcc
      721 agacgaccaa ggtcgccaac cagatcatcg tcgcgctcaa catcgaggcc gtgggggagg
      781 cgctgctctt cgcctccagg atgggggcgg accccgccaa ggtgcgcgcg gcgctgatgg
      841 gcggctttgc cgcctcgcgc atactcgaag tgcacggcga gcgcatggtg aagcgcacct
      901 tcgatccggg ctttcgcatc gagctgcatc agaaggactt gaatctggcg ctgcagagtg
      961 cgaaggcgct cgggctgtct ctgccgaaca ccgcaactgc gcaggagctt ttcaacgcct
     1021 gcgtcgccca cggcggcaag gcgtgggacc attcggcgtt ggtgcgcgcg ctcgagatca
     1081 tggcaaatca cgaaatcggc cagaagtccc cggccatgct cgattgattg cccagtgaac
     1141 aatcggtctt gcccgagcgc gacgaagagg atcggcgcag gcaactcgcc cttcctgcgc
     1201 ttggcaggcc cggaatgatg cagtcttggg gcccaagatg gatacaccgc gcgatctact
     1261 aaggcgcatg ttcgatgcag ccatcaatgc tgcccagccg gaacgctgca ttccgcccca
     1321 tctgcctgag tctcctcgtg gccggatgat cgtgatcggt gcgggcaagg cctcggccgc
     1381 aatggccaag gcggtagagg accactggcc gggcgaactc accggcttgg tagtcacccg
     1441 ctatgggtac ggcgtgccat gcaagcggat agaaattgtc gaggcggcgc acccggtgcc
     1501 cgatgcggcc ggcatcgatg ccgcgcgtcg catccagaac ttggtagcag gcttgaccgc
     1561 tgatgatctc gtgttgtgcc tcatctccgg cggcggttcg tctctgctgg tagcgcccct
     1621 tgacggcctc acgctcgaag ataagcaggc ggttaaccgc gcgttgctta agtccggcgc
     1681 cagcatcagc gaaatgaact ccgtgcgccg gcacctctcg gcgatcaagg gcgggcggct
     1741 cgccgccgga tgtcatccgg caaaggtggt aacgctactc atctccgacg tacccggtga
     1801 caacccgatg gatgtcgcct cgggtccgac ggtacccgat cccacgactt gcgccgatgc
     1861 cttggcgatc atcaagcgct acggcgtcga agtcccggcc gaggtgcaca ggattctcga
     1921 gaccggcggc ggcgagacgg tgaagccggg tgactaccgg ctcgcgggca tcgacacgcg
     1981 catggtcgcg accccgcaga tggcgttgga ggctgccgcc agagttgcgc aggaggccgg
     2041 catctcgggc gccatacttg gcgacagcat cgagggcgag gcgcgcgacg tagccaaagt
     2101 catggccggc atcgcgcttc aagtcgccgt gcatggccaa ccatttcaac cgccttgtat
     2161 cctgctctcc ggcggggaga ccaccgtcac cgtgcgcggc caagggcgcg gcggccgcaa
     2221 tgtcgaattt ctcctgtcgc tcggcatcgc cctggatggc caccccggca tccatgccat
     2281 tgccggcgac acggacggag tcgacggtca ggaggagatc gccggcgcgt atttgtcgcc
     2341 ggattccctc gcgcgtgcgt ggaccaaggg catcaggccc aaggacagtc tcgccaacaa
     2401 cgacggccat ggattctttg aagcgctcgg cgattcggtg gtgaccggtc cgacactgac
     2461 caatgtcaat gatttccgcg ccatattgat aaccgatgaa gcgaggagta cggcagtggc
     2521 aagccgctaa acatcatgcg ccgtcaccgc aacgccaaaa tcgtcgccac gctcgggccg
     2581 tcgagttcgg aggccaccac catccgcgcc ctgttcgacg ccggtgccga cgttttccgt
     2641 ctcaacttca gccacggcag ccaggagcag cacaaggagc gcctggacat catccgcggc
     2701 atcgagcggg aaaccggccg cccaattgcc gtcctgctcg atctgcaagg accgaaacta
     2761 cgagtcggca cattcgctca tggtccggtc gaactcagcg ctggcgctgc ctttcggctc
     2821 gacatggacc cgacgccggg cgacgcgacg cgcgccccac tgctccaccc cgagatattc
     2881 gcagcgctga agccggatac cgacttgctg ctcgacgacg gcaagatccg gctcagggtc
     2941 gaatcctatg gccgggattt cgcggccaca cgcgtcacca tgggcgggct actctccgac
     3001 cgcaaaggcg tcaatgttcc cggcgtcatc ctgccgattt ccatcatcac cgagaaggac
     3061 cgcaaggatc tagagttcgg gcttgagctc ggagtggatt ggatcgcgct ttcgttcgtg
     3121 cagcgcccgc aggatcttga ggaagcgcgc gcactcatca aagggcgcgc ggcgatcatg
     3181 tccaagctcg aaaagcccgc cgcggtcgaa tgcctcgacg aaatcgtcgc actgtccgac
     3241 ggggtaatgg tcgctcgtgg tgacctcggg gtggaacttc ccgccgagca tgtgccgccc
     3301 attcagaaac gcatggtccg cgcctgtcgc aaggccggta agccagtgat cgtcgccacc
     3361 cagatgctcg attcgatggt gaactcaccg gtgcccactc gcgccgaagc ctccgacgta
     3421 gcaaccgcgg tgtacgacgg cgccgacgcg gtcatgctct ccgccgagtc ggcgagcggc
     3481 aagtatccgg tcgaggcggt gcagatgatg aatcggatca tcacgcaagt ggagagcgat
     3541 ccgcattacc gcgacgtcat cgaagcctcc cacaccccag cggaagcgac cgtgcccgat
     3601 gccattttct gcggcatgcg gcgggtggcc ggactgctgc gcgtggccgc caccgtgacc
     3661 tacaccagtt ccggctattc caccctgcgc gccgcacgcg agcgaccttc ggcgcccata
     3721 gtcagcctca caccagatat ccgcacggcg cggcggctcg ccttggcgtg gggcgtgcac
     3781 tcggtgcata cccacgacgt gaaagacgtg cccgagatgg tagccaacgc ctgccagacg
     3841 gcgctgcgcg aagagttcgc ccggcccggc gatatgattg tgattgccgc cggcatgccg
     3901 tttggcattg cgggcaacac gaatttgctg cgcgttgcac agatttagca atgtgcgccg
     3961 ctggctcaag ccggacgatg aacgctccca ggaattgcgc gaggagattt ggaatcccgg
     4021 acacaggcca catttcgttc agatttctcg gatggaggac ccgatcatgc ttcttaaaaa
     4081 acttctgctc ctgatcctcg caaccgtgtc gctcgctgcc gcgtcgccat ccgcaatggc
     4141 cgatgagctg gaagacatca tccaggcagg cagcatcaaa atcgccgtgc cagcggactt
     4201 tcctccgttc ggctcggtcg gcaaaactgg ggaggtggag ggctacgatg tggaggtcgc
     4261 ccggctcgtg gcgagggacc tcggcgtcaa acttcaactg gtgccgttaa cgagcccgaa
     4321 tcgtgttccg tacttgctga ccgggaaggt cgacctcgtc atctcgagcc tgggcgccaa
     4381 cccggagcgc gccaaggtga tcgcatttac cgacgcctat gggccgttct acgctggcat
     4441 ttttggggac gcgaaagcac agttgaagtc ggctcccgat ctcgctggca agacggtcgg
     4501 cgtgacccgg gggaccattg aggacgccga gcttgcccgg ctcgcgccca acaccgccac
     4561 cattcaacgg ttcgaggaca acaacgcgac attgtctgct ctcgcctccg gaaaggtaga
     4621 tctcatcgcg accggtagcg ccgccgccgg cgccttctct cagaagaacc cgggtaaggc
     4681 cgagaagaaa ttcgtgctaa gggactctcc cgtccatatc ggcgtgcgca aaggcgaacc
     4741 tgatctggtg gcgtggttaa acgtattcat ccattaccac caaaagcccg gcggcgagct
     4801 cgatgccctc gcgcaaaaat ggttgggcga atcgctcgcg ggcttaccgc ggttctagtc
     4861 ctagctcgcg ccctatttgc atcgcaactg accctctcgg cgagaagcag ggatccatca
     4921 tggcgaagat caaggacatt cgaggcctcg agattctgga ttcgcgcggc aacccgaccg
     4981 tcgccgcgac cgtcgttctg gactcgggcg ccagtgggca tgcggccgca ccctcgggag
     5041 cctcgaccgg gacccgagag gcggtcgagc tgcgcgataa cgacctcaag cgctacggcg
     5101 gcaagggtgt gatgacggcc gtgagccacg tgaacggcga actccgtaat gcactcattg
     5161 gccgggacgc cgctgaccag gcgagcatcg accacaccat gatcgaactc gatggcacgc
     5221 gcaacaagtc tcgcttgggc gccaatgcca tcctggccgt gtcgctcggc gtggcgaaag
     5281 cggccgccca ggaagccgga gcaccgctct atcgttacct agcgaaaagc aaggcaggca
     5341 agctgcaaat accggtgccg atgatgaata tccttaacgg cggcgtgcat gcggacaaca
     5401 acgtcgacat gcaggagttc atgatcttgc cggtaggcgc acccagtttc cgcgaagcgc
     5461 tgcggtatgg cgtcgaaata ttccacacct tgaaggcagt gctgcgtgcg cagggcatga
     5521 gcacggcggt cggcgatgag gggggctttg cgcccgacct tccctccaac gaagcggcgc
     5581 tggaaaccat cctggaagcg atcgcacagg ccggttacac cgccggcaag gacgtctatc
     5641 tggggctcga cccggctagc tccgagttct accagggagg ccgttacgtc ctcgccgccg
     5701 aagataagcg gttaacttcc gaggagtttg tcgattactt cgcgacatgg gccacgcaat
     5761 acccgatcct ctcgatcgaa gacggcatgg ccgagggaga ctgggatggc tggacgctgc
     5821 tgacccagcg tctgggtgac agggtgcaac tggtaggcga tgacctgttc gtcactaata
     5881 ccgaaatctt gcagcaaggc atcgatcgcg gcgtagcgaa ttccgttctc gtcaagctca
//
LOCUS       DATILV010000416         1787 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1889238, whole genome shotgun sequence.
ACCESSION   DATILV010000416 DATILV010000000
VERSION     DATILV010000416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1787)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1787)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1787
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1889238"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1499..>1787
                     /locus_tag="VLJ17_09440"
     CDS             1499..>1787
                     /locus_tag="VLJ17_09440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23239.1"
                     /translation="MVAGIAAAGGDAAAQAQFQWSIPQIDARVVAINIPGASAISQVG
                     TFLNESGACARPIPTFFPSFTQPGAVLDPSRILVGNRSNFGAPLAVGAGSEG"
BASE COUNT          364 a          512 c          518 g          393 t
ORIGIN      
        1 ctcacgctta tcgacgcgtt gcgggcgcag atcagggcgg aagcggcggg gtgagatcgg
       61 aagtcccatc ccgaccagac acgcgatcgc gccgacaagc tcaatcgctc ctttgatgtc
      121 acgcatcggc cttggcgtga atttgctgga ccgtcggcca aatatttcga acctcgcgtt
      181 gtcggtgtgt catctcacgg cccattcagc gacgctcgtt tccgagtccg ccctgtcaaa
      241 ccacctgacc gtcgaccttc acggttaaat catgtccatg gagcgcggcg tgtaaagcct
      301 aggccgcctg gccgtatcgg tgcggcgtcg ataagccgtt gtgccttgat gttcatatat
      361 ccgccggtgc ggcattgttc atgggcgcgc atgccggcgt tgcgcttgat ggagccagcg
      421 acgctggcgt caggagcgat gcgccacaag cgtagaccag attgcaagtg tccgcagcgc
      481 gcaatttcag accaatttgg cgtcgcaaaa tgcgccggat gcgaacggtg caggatatag
      541 agtaggacgg aggcgaattt ccgcgacctg cgggcctctt cgtggcggtg cgaagcgccg
      601 cccgcaagct tggcgtctcg atcgcggtgg gccgccgagc agcgccgaga ccattcgccg
      661 cggtcgctgc ggtggatgcg cctgcgtccc gaatccttgc ggcacgaaag cgcaaggggc
      721 gcaggctggt ggagattgca acagccaact tggacaatgt cctttgagtt cggaggctca
      781 attgcggata tcccgagaca gctgacgaca cgaccaaggt ccccatggcc cgctcgcaat
      841 cgaggccaac atgcacccaa ttccatgaca tgctggtcat cgggcgagag gttgttcgag
      901 gagggaaaga gcgaacaggt gctcgcggct aaaccgttag ccaatctcga ttgcgaattg
      961 ggtcgccgcc cgcgctcttg gaatgccaag acctttttgt ccaacgtttg caactcgttc
     1021 tgcagccaca atcgatcgaa gcgcgtgaaa atgccgggac gttttcgtcc cggcattttc
     1081 cctccccaaa gcggccggtt cttacgacat gaataaaaaa tatttcccgt ttaacgggat
     1141 gtctaaattt agacactttc tcgcccgatg gggtttctgt tgaaggcgtt gttgggattt
     1201 aatattgtcc aaaacatttt ttcaggctcc tttcgcccag aaaatcggac ggtaacaagc
     1261 ctcccggcgc gctttcatta aggctgtgtc gcaatccgcc catgggcgat aagtatacag
     1321 ggggctagca atgagtattt gttctattgc gtcaaataca acaatctcag gtagtaagcg
     1381 gttgtgccaa ttaatatcgg atacgtccgc ttgccttgcg actatccggc aggagttacc
     1441 ctacatccag agatcaacgc gtattcaaag gctaacgatc aatctgccag gaatagcctt
     1501 ggtagccgga attgccgccg cgggcggcga tgcggcggcc caagcgcagt tccaatggtc
     1561 aattccccaa atcgacgccc gtgttgtcgc cataaatatt cctggcgctt cggctatctc
     1621 gcaggttggt acatttctta acgagtcagg tgcgtgcgcc cggccgatac ccacgttctt
     1681 tccctcattc actcagcccg gcgcagtgct ggatccgagt cggattctgg tcggcaaccg
     1741 atcgaacttc ggcgccccgc tggccgtggg cgccgggtcg gagggct
//
LOCUS       DATILV010000417         4907 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1119804, whole genome shotgun sequence.
ACCESSION   DATILV010000417 DATILV010000000
VERSION     DATILV010000417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4907)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4907)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4907
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1119804"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1205)
                     /locus_tag="VLJ17_09445"
     CDS             complement(<1..1205)
                     /locus_tag="VLJ17_09445"
                     /inference="COORDINATES: protein motif:HMM:NF017076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHASE2 domain-containing protein"
                     /protein_id="HSV23240.1"
                     /translation="MGCSFIVIVIVLRTLAPAPFMASQNAIFDAMQRIAPRPYVEAPV
                     RVIDIDDESLQRIGQWPWSRDVLATLTERLTAFGAASIAFDFVFSEPDRTSPSTLMKK
                     WATMPGFPAVSAATQELPDYDRRFAEAIASSPVVLSIALVGSEGRGAPATKAGFALVG
                     ADPTRTVAQFPGAITNLPELEDAAKGVGSFSITGEDGETIRRIPLLARYGDQIVPSLA
                     LEALRVAQGADTIGVRRESEASLRLRVGDVMVPADADAGMRMHFTAPVAGRTIPAWQV
                     LSVDHRSQVEDRIAGHIVLVGTSAAGLSDLRATAVNPFDSGMNIHAQAIEQILLGAHL
                     VRPTWFAGAEVAAAVALAVGLIFICAFQGVGLSLSALAAVVTTVLAAAWYGYADHHLL
                     GDPTTVCVAA"
     gene            1687..2340
                     /locus_tag="VLJ17_09450"
     CDS             1687..2340
                     /locus_tag="VLJ17_09450"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HSV23241.1"
                     /translation="MYLTSAICRFLVPVTVCTFTAGAVLADTMTVGNVDKVQAQVDAT
                     QAGQKRAMAIGSDVYFKDVCHSGNNARLQATLKDGTQLTLGANATMVVDEFVYNPLPL
                     TSGALSVRITKGAFLFVGGKVEDKTGAKVQIQTPVGTLGVRGTTVWGGPIDNGYGVIV
                     LNGEVTLTTRTGTVTLRQGQGTMVFGQGTPQSARPWPADRMKRAVSSVTFANPPAAR"
     gene            2662..3495
                     /locus_tag="VLJ17_09455"
     CDS             2662..3495
                     /locus_tag="VLJ17_09455"
                     /inference="COORDINATES: protein motif:HMM:NF041278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CmcJ/NvfI family oxidoreductase"
                     /protein_id="HSV23242.1"
                     /translation="MAQVLESETAPNAIEATLSYIVDDGTKIFTETAVPGGTDVRFGG
                     TPDPRRVTIRNGRHHADALTLERNGFRFIRHDTAVSDFFDEAQVRRVYYAEMEALVKA
                     ESGASRVVVFDHTLRTADDTAREAHKIREVVRRVHNDYTEWSGPQRVRDLLPNEADEL
                     LRRRFAIIQVWRPIRHPVETFPLAICDARTLSPENLVVSERRYPNRIGQTYAITYNPE
                     HAWYWFPRMQRNEALVFKVYDSLRNGHARWTAHTAFQDPTSPPHARPRESIEIRTLAF
                     F"
     gene            3809..4114
                     /gene="clpS"
                     /locus_tag="VLJ17_09460"
     CDS             3809..4114
                     /gene="clpS"
                     /locus_tag="VLJ17_09460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014497217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HSV23243.1"
                     /translation="MSNIATKRRTKIQLKTERPRLHKVILVNDDYTPREFVVKVLKAE
                     FRMNEDQAYRVMVTAHKRGACVVAVYARDVAESKATRATEAGRSKGYPLLFTTEPEE"
     gene            complement(4162..4869)
                     /locus_tag="VLJ17_09465"
     CDS             complement(4162..4869)
                     /locus_tag="VLJ17_09465"
                     /inference="COORDINATES: protein motif:HMM:NF014968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AprI/Inh family metalloprotease inhibitor"
                     /protein_id="HSV23244.1"
                     /translation="MPSRQCTLKALLSLAAVIAASQALAQRSITSNETFKTMIGKWEL
                     SNADRDRACQLTFKADPSGTLFKLDLDKACATQMPELKDVTGWTIGGLDLVKLMDSKG
                     KSVFEFSEVESGIFEAQRPGEGIFFMQNAAAAAAVNISLEQMAGDWGVVRGSGKTVCT
                     ITLTNAAAGDDAFALKLKPGCEAFVTSFGPAAWYLDRGELVFKSKAGRFWRFEANDPT
                     NWQRVPEGREPINLVRQ"
BASE COUNT         1056 a         1463 c         1471 g          917 t
ORIGIN      
        1 gcagcaacac aaacagtggt cggatcaccg agaagatgat ggtctgcgta gccgtaccat
       61 gcagccgcga gaacggtcgt gaccaccgcc gcgagggcgc taaggctcag gccaaccccc
      121 tgaaacgcac agataaaaat caggcctacg gcgagagcaa cagctgccgc gacctcagcg
      181 ccggcgaacc atgtcgggcg caccagatgg gccccaagca gtatttgttc gatcgcttga
      241 gcgtggatgt tcatgccgga gtcaaagggg ttgaccgcgg ttgcacgcaa atccgacagg
      301 cccgcagcac ttgtgccgac caacacgatg tggcccgcga tccgatcttc aacttgtgac
      361 cggtgatcta cgctcagaac ctgccatgct ggaattgttc gccccgcaac cggggccgtg
      421 aaatgcattc gcatccctgc gtcggcatcg gccggaacca tgacatctcc cactctcagg
      481 cggagcgagg cttcactttc tcgccgcacc ccaatggtgt ccgcgccctg cgcaacccga
      541 agcgcctcca gcgctaaaga ggggacgatc tgatcgccat accgcgcaag caacggaatg
      601 cgtcggatgg tttcgccgtc ctcgccagtg atgctgaagc taccgacgcc cttcgcggca
      661 tcctctagtt ccggcagatt ggtaattgcc cctggaaact gtgcaacggt tcgggttggg
      721 tcggcaccca ccagcgcaaa tcccgccttc gtcgcggggg ctccacgccc ctctgacccg
      781 accaaagcga tcgacagaac gacggggctc gatgcgatgg cttcggcaaa tcgccgatca
      841 taatcgggga gctcctgagt ggcggccgaa accgccggaa atcccggcat cgttgcccac
      901 tttttcatca gcgttgaagg cgaagttcga tccggttctg aaaacacgaa atcgaaagca
      961 attgaagcgg cgccaaacgc ggtcaatcgt tcggtcagag ttgccaagac gtcgcgagac
     1021 cacggccact gtccgatccg ctgcagactt tcgtcgtcga tatcgatgac acgcacgggc
     1081 gcctcaacat agggccgcgg agcgatccgt tgcatcgcgt caaagatcgc gttttgcgat
     1141 gccatgaagg gtgccggtgc aagcgttctg agcacgatga cgatgacgat gaaggaacac
     1201 cccacccaag ccggtaggat tcggcgcgaa gccagtgcgg cagaaatacc gcgtctcctt
     1261 gtggacaaac tcgtcattcg agccaatgca gaggaaacaa gaaaaaaggg gcgaccaaat
     1321 ggccccgctc ggatgccgat tcgttggcgg cttttatttg gcaaaaatta ggttattctg
     1381 aggcttaggt gctgcgatct accaatcagg cccacaaacc gatgcaacaa ctgaggcggt
     1441 gagcaggtaa tcaaacttat ccacagaaat tttgtatgct gccgcgcttt ccctcaaagg
     1501 ttgagagccg ctcccattga ctgagaaaag aacatcacag attttgtccc gaactaaaca
     1561 caccaaatag tcacatcaaa tctcaaagcg acacggaata aagcgcgcaa cttcagcggt
     1621 cgcgcggcgg cgctgctgtg ggccgggagc gcgcgtgcga ccatcatgag caaggagtaa
     1681 atgcaaatgt acctgacgtc cgcaatttgt cggttcctgg tgcctgttac cgtgtgcacc
     1741 ttcacggctg gagctgtgct tgccgatacc atgaccgtcg gcaatgtcga caaggtccaa
     1801 gcgcaagtcg atgccacgca agctggccag aagcgcgcca tggcgatcgg ttcggatgtc
     1861 tacttcaagg atgtctgcca cagtgggaat aacgcgcgcc ttcaggccac cttgaaggat
     1921 ggaactcagc tgacactggg ggcgaatgcc acgatggtgg tcgacgaatt cgtctacaat
     1981 cctcttccct taacgtcggg cgcgctttcg gtccgaatta ccaaaggtgc gttcctgttt
     2041 gttggaggca aggtggaaga taagaccggc gcgaaagtcc aaatccagac gccagttggc
     2101 acgctgggtg tgcgcggtac caccgtctgg ggcgggccga tcgataacgg ttatggagtc
     2161 atcgtgctga acggcgaggt gaccttgacc acgaggacgg gaaccgtcac cctgaggcaa
     2221 ggtcaaggta caatggtatt tggccagggc acgccgcaat cagcgcgccc ctggccggcg
     2281 gaccgcatga agcgcgcggt ctcctcggtc accttcgcaa acccacctgc ggcgcgatag
     2341 gagttttgcg atgaccgaac agcagccggc cacgatcccg cggcactgtg actggctgca
     2401 ttgatccgtc gcatatgccg tcgcctccct gagaagcaca aaagcaggtc ttgggcgcct
     2461 cgacgaagca gtcgcgggcg atcgttggcg tttgctcagc ggagctgtcc ggcggtgggc
     2521 ggtgatcgtt ggccgttcct cgagatcgga cttgcgctgg cggcactgtc gaaattgtgc
     2581 ggtgacaatc taccgatttg cgatgacaat ctacctatta gcgcaccctt ggctccgccc
     2641 gccagcgcaa ggaggttgtc catggcccag gtcctcgaat cggaaaccgc gcctaacgcg
     2701 atcgaggcga cgctcagcta cattgtggac gacggcacca agattttcac cgagaccgcc
     2761 gtgcccggtg ggaccgacgt gcgcttcggc ggcacgccgg atccgcgtcg cgtgacgatc
     2821 cgcaatggtc gacatcatgc ggatgccctt acccttgagc gcaatggatt tcgtttcatc
     2881 cgtcacgaca cggcggtcag cgacttcttc gacgaggcgc aagtgcggcg agtgtattac
     2941 gccgaaatgg aagccctggt gaaggcagag agcggagcat cgcgcgtggt cgtgttcgat
     3001 catacgctgc gcacggccga tgacaccgcg cgcgaggcgc acaagattcg cgaggtcgtg
     3061 cggcgggtgc acaacgacta tacggaatgg tcgggcccgc agcgcgtgcg cgatcttcta
     3121 cctaatgaag ccgacgagct gttgcgccgc cgctttgcca tcatccaagt gtggcggccg
     3181 atccggcatc cggtcgagac ctttccgctg gcgatctgcg atgctcgcac tttgtcgcct
     3241 gagaatttgg tggtgtcgga gcgacgctac ccgaaccgca tcggccagac gtatgccatc
     3301 acgtataatc cggagcacgc gtggtactgg tttccgcgaa tgcagcgcaa tgaggcgttg
     3361 gtattcaagg tctatgattc gctccgcaat ggccacgccc gatggacagc ccacacggcc
     3421 ttccaggatc cgacctcgcc ccctcatgcg cgtccgcggg agagcattga aattcgcacg
     3481 ctggcgtttt tctgaaagcc tggcaggggg gacctgtcat ttcggcaaaa cgaactgagc
     3541 cgcgacgcga acgctcaggg acgctcggcg atcaaacgtg atccggggta gaaaaggaga
     3601 ggggcccgct ccccctcagg cgacccgacg ccgttgcggg ccgatgtcca aaagaggcgg
     3661 aaaatcgtgg aggcacgccg ccgggatcgc cgtgcatgat cacgtcatcg tcggccggga
     3721 ggggcgccag agccttaagg gataggttga tttgcccatt gtcgcgccag cataatggcg
     3781 tccggcaaca taagaagcag cttctccgat gagcaatatc gcgaccaagc ggcgcaccaa
     3841 aatccagctg aagacggaac gaccgcgact gcacaaggtc attctcgtca atgacgacta
     3901 cacgccccgg gagttcgtcg tgaaggtctt gaaagcagag ttccgcatga atgaagatca
     3961 agcgtatcgg gtcatggtga ccgcgcataa gcgcggtgcg tgcgttgtcg cggtctatgc
     4021 aagagacgtt gccgaatcca aggcgacgag agcaaccgaa gccggccgca gcaagggcta
     4081 tccgctcttg ttcacaaccg aacccgagga atagcgaagc cgcgagcatg tcgggcaagg
     4141 ccgtgccagc gtgctatcag cctattgcct caccagattt atcggctcgc ggccttcggg
     4201 aacgcgctgc cagttggtcg ggtcattcgc ctcgaagcgc cagaagcgcc cggcttttga
     4261 cttgaacacc agctcgccgc ggtccaagta ccaggccgcg ggcccgaagc tggtcacaaa
     4321 ggcctcacaa cctggcttga gcttgagcgc aaaggcgtcg tcgccggcgg ccgcattggt
     4381 cagcgtgatg gtgcacaccg tctttccgga tccgcgcacc acgccccaat ctcccgccat
     4441 ctgttcgagc gagatattta ccgcagccgc ggcggccgca ttctgcatga agaagatgcc
     4501 ttcgccgggc cgctgggcct cgaaaatgcc gctttcgact tcggagaatt cgaacacgga
     4561 cttgcctttg ctgtccatca atttgacgag atcaagaccg ccgatggtcc agccggtgac
     4621 gtccttcaat tcaggcatct gcgtcgcgca ggccttgtcg agatcgagct tgaacaaggt
     4681 accactcgga tcggccttga acgtcagttg gcaagcccga tcgcgatcgg cgttggaaag
     4741 ctcccacttg ccgatcatgg tcttgaatgt ttcgtttgaa gttatcgagc gttgggcaag
     4801 ggcctgcgat gccgcaatga cagccgcgag gctgagcagg gctttcagcg tgcattggcg
     4861 actgggcatt tcgagatact cctcacaagc gcgccgcaac acctatg
//
LOCUS       DATILV010000418         5560 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4441722, whole genome shotgun sequence.
ACCESSION   DATILV010000418 DATILV010000000
VERSION     DATILV010000418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5560
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4441722"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..171
                     /locus_tag="VLJ17_09470"
     CDS             <1..171
                     /locus_tag="VLJ17_09470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007613321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HSV23245.1"
                     /translation="LPLVVLEAAGVPLDPSFAEQKKILQRCGGAFRRCAGGAEARRFN
                     RLLIDAGLIKGL"
     gene            complement(618..1430)
                     /locus_tag="VLJ17_09475"
     CDS             complement(618..1430)
                     /locus_tag="VLJ17_09475"
                     /inference="COORDINATES: protein motif:HMM:NF012451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HSV23246.1"
                     /translation="MANTLYDTLEVIPTASPETIHAAYRSLISRYHPDKVAGLGPELQ
                     AIANVRTKEINHAYDILGHAARRASYDKELRDIGSPPLEQQRYAAGAQWAAAARPIAD
                     KPRGRRLRAPFVAALAAVAALLTLPHAANLIFGVADFLVTGHTRYFQDFVNSVDADVR
                     YSGFPYLLILWGWLFVGYLFGLISYLFGIRVGEGIALRFGEPFAGNERLFLFLTFVCV
                     IAARELFFSAHTLASVLTDMFVLAGAYRAALGTASSAAMPEAQPEGESAYRS"
     gene            complement(1576..2520)
                     /locus_tag="VLJ17_09480"
     CDS             complement(1576..2520)
                     /locus_tag="VLJ17_09480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009031056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetamidase/formamidase family protein"
                     /protein_id="HSV23247.1"
                     /translation="MTVRVDAGATTVHWGYLDSTLKPVATIDSGDAVTISTVSGPPDA
                     LPPPPAVIPQALYDIHNAKTRRMLPGHMCTGPVAVRGAKPGQVLQVEVEDIALHYDWG
                     YTACRPLRGALPHDFAEPHMIHVALERNRMVGRLPWGTEIPLRPFFGVMANAPPRAWG
                     TVSSIQPRQFGGNMDNKELIAGTTLFLPVFVDNALFSVGDGHGAQGDGEVCVNAIETG
                     LIGRFRLTVRDDIKLTWPMAETPTHVITMAFDPDLDDCVVVALRAMLDLIEARTTLKR
                     HEAYMLASLAADLRVTQVVNEHKGVHMMLEKQYLQPTR"
     gene            complement(2707..3597)
                     /locus_tag="VLJ17_09485"
     CDS             complement(2707..3597)
                     /locus_tag="VLJ17_09485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HSV23248.1"
                     /translation="MDWDKLKVFHAAAEAGSFTHAGEQLGLSQSAVSRQVSALEQELT
                     VSLFHRHARGLILTEQGELLYRTAHEVFMKLESARAKLTDSRERPNGDLKITTTVGIG
                     VHWLTPRLGEFGELYPDIRITLITTDEELDLAMREADVAIRLRQPTQPDLIQRKLFSV
                     RFHAFASPEYLKRFGTPHSHEDLDKHNLLVMGGHVPQYLQNTRWLVEVARNGKGPRSP
                     HLVINNIIGILRACQAGLGIAMLPDYIVEEDGGLVQLFGETETIALDAYFVYPEELKS
                     VARVQAFRDFLVSKAQRWNY"
     gene            complement(3691..4656)
                     /gene="trxB"
                     /locus_tag="VLJ17_09490"
     CDS             complement(3691..4656)
                     /gene="trxB"
                     /locus_tag="VLJ17_09490"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007596678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADP) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HSV23249.1"
                     /translation="MSKTTYAKIVIIGSGPAGYTAAIYAARAMLEPVMIQGLQPGGQL
                     TVTTDVENYPGFADVIQGPWLMEQMEKQAAHVGTRLVPDHASKVDLARRPFRIMCDSG
                     DTYMADSLVIATGAQARWLDLPTEQKFRGYGVSACATCDGFFYKGKNVIVIGGGNTAV
                     EEALFLTNFANKVTVVHRRDAFRAERILQERLFRHPKIEVIWNSVLQEVRGSESPRKV
                     VAAAIRNVKTEAITEIHADGIFIAIGHSPASELFGGQVEMKPNGYIKTAPFSTATSVP
                     GVFAAGDVTDDVYRQAVTAAGLGCMAALEAERFLAAQHMESVAAE"
     gene            4931..5413
                     /locus_tag="VLJ17_09495"
     CDS             4931..5413
                     /locus_tag="VLJ17_09495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HSV23250.1"
                     /translation="MRRLDTIDRDILRELQDDGRITNVELARRVGISAPPCLRRVRSL
                     EEAGYIKGYRALLDEKALGCEVTAFAMVHLASQTEADLQAFEAFVRREPLVRECWMLS
                     GEIDFVLKCVAPSLSKFQAFVTDLTAAPHVLNVKTSLTLRNSKDTPMVPVELLRSGPT
                     "
BASE COUNT         1100 a         1644 c         1672 g         1144 t
ORIGIN      
        1 cttccgctgg tcgtgctgga agctgccggc gtgccgcttg atccctcctt tgccgagcaa
       61 aagaagatcc tccagcgctg cgggggcgct ttccgccgct gcgccggtgg ggccgaggct
      121 cggcgcttta atcgattgct gatcgatgcc ggcctgatca agggtctata gccgaccggg
      181 ggccgacatc tcgcgtcgcg caagtgcatg ggcagtggca cgtgtttggg tttctaagat
      241 tgtgttcgtt tcgaacaaag gcgagaacct tcgcaggtcg gatttaatag aagcgtgtgt
      301 acgtcctgtg cctcgcttta gggaacggag gagggaacgt cgcaacgccg agacccttcg
      361 atccagattg gcacccaaaa tcaacctgac gggcgtggcc ggtttggaag cggtggacgt
      421 cccggcccag ttcgcgatcg gcgaggcagt ggacgtgaat gaaattgtgt tcaggccaac
      481 caaacaagaa ctctgggcta ttcgtttgct gctggagcca cgctttcgct cgctcacatg
      541 ctcgaattct agcgccggct ttcgggctac catcagaccc gccgcctccg ccgagcgcgc
      601 cgctatggcg cggccggtca actccgataa gcagactcgc cctcaggctg ggcttccggc
      661 atagcggccg aagacgcggt ccctagggct gcccgatatg cgccggcaag cacaaacata
      721 tcggtcaaaa cgctagccag tgtatgagcg gagaaaaaca gttcgcgggc tgcaatgacg
      781 cagacgaatg tcaaaaacaa aaagagacgc tcattgccgg caaacggctc gccaaatctc
      841 aatgcgattc cttcgcccac gcgtatgcca aaaagatagg agatcaatcc aaacagatag
      901 ccgacaaaca gccatcccca caaaatcagc agatatggaa atcccgaata acggacgtcc
      961 gcatccaccg aatttacaaa gtcctgaaaa tatcgagtat gtcctgtcac cagaaaatcg
     1021 gcgacgccaa aaatgaggtt cgccgcatgc ggcagcgtca acaacgccgc aactgctgcc
     1081 agggcagcga cgaagggggc gcgtaggcga cggccccgcg gcttatctgc aataggccgg
     1141 gccgcagcag cccattgcgc gccagcagcg tatcgctgct gctccagcgg cgggcttccg
     1201 atgtcgcgca gttctttgtc atagcttgct cgccgcgcgg catgaccgag tatgtcataa
     1261 gcgtgattga tttctttggt gcgcacgttg gcaattgctt gaagctctgg tccgagtccg
     1321 gccactttgt ccggatgata ccggctgatc aggctgcgat acgcggcatg aattgtctcc
     1381 ggactcgccg tcggtataac ctccaaggta tcgtaaagag tattggccat aggcgattgc
     1441 tcatactgtc tcgatcgtcg gcgcaccgtg ttggctttcg actgcgcctt aagggggtac
     1501 tatacgcggt aacccgtttc gaatgaaggc gcaccggcga gacgcccgca gtcccacgat
     1561 gcccgcgtcg aggcctcacc gcgtcggttg caaatactgc ttctccagca tcatatgcac
     1621 gcccttgtgc tcgttcacga cctgggtgac gcgcaggtca gcggcgaggc ttgcgagcat
     1681 gtaagcctcg tggcgcttga gcgtggtacg ggcttcgatc aggtcgagca tcgcccgcag
     1741 cgccaccacg acgcaatcat cgaggtcggg atcgaacgcc atggttataa catgggtcgg
     1801 ggtttcggcc attggccacg tcagttttat gtcgtcgcgc acagtgaggc ggaagcgacc
     1861 gatcaagccg gtttcgatgg cattgacgca aacctcgccg tcgccttggg caccgtggcc
     1921 gtcgccgacc gagaacaggg cgttgtcgac gaacaccggc agaaagagcg tggtgccggc
     1981 gatcagctcc ttgttgtcca tgttgccgcc gaactgccgc ggctggatgc tcgacacagt
     2041 gccccaggca cgtggcggcg cattcgccat gacgccgaag aacggccgca gtgggatttc
     2101 ggtgccccac ggcagtcggc caaccatgcg attgcgctcc agtgccacat gaatcatgtg
     2161 cggctccgca aaatcgtggg gcagcgctcc tcgcagcgga cgacaggcgg tgtaacccca
     2221 gtcgtaatga agtgcgatgt cctcgacctc gacctgcaag acctgaccgg gcttggcacc
     2281 ccgtaccgcg accggcccgg tgcacatgtg ccctggaagc atccgccggg tcttagcgtt
     2341 gtgaatgtcg tagagcgcct gcggaatgac ggcaggcggc ggcggcaacg cgtcaggcgg
     2401 tcccgacacg gttgaaatcg tcaccgcgtc tccgctgtcg atggttgcga ccggcttgag
     2461 tgtagaatcg agatagcccc aatgtaccgt cgtggcgccc gcatctacgc gtactgtcat
     2521 tttgaactcg ccgttgcctt gatccgcagg atggggtggg gcaccgactc cggcctttgg
     2581 ccggcccgat gataagctcc acgaaaccca tcataagact gtccacgcag cctggtcgat
     2641 gatgctttcg caaaggctca atccatccta cgcatgctgc taaccattga cataatcgag
     2701 cgcacgtcag taattccagc gttgcgcctt gctgaccagg aagtcgcgaa atgcctgcac
     2761 ccgtgcgacc gacttgagtt cctccgggta gacgaaatag gcgtcgagcg cgatcgtttc
     2821 cgtctcgccg aacaattgca ccaagccgcc gtcttcttcg acgatgtagt ctggcagcat
     2881 cgcaatgccg agcccggcct gacaggcgcg caggattccg atgatgttat tgatgacgag
     2941 atgcgggctg cgcgggccct tgccgttgcg ggcgacttcc accagccagc gcgtgttttg
     3001 caggtattgc ggcacatggc cgcccatcac cagaaggtta tgcttgtcga ggtcctcatg
     3061 ggagtgcggg gtgccgaacc gcttgagata ttccggcgac gcaaaggcat ggaagcgcac
     3121 cgagaatagc ttgcgctgga tcaggtcggg ctgagtcggc tgccgcagac ggatggcgac
     3181 gtcggcctcg cgcatcgcaa gatcgagctc ttcatcggtg gtgatgagcg tgatgcggat
     3241 gtccggatag agttcgccga actcgccgag ccgcggcgtc agccaatgca ccccaatccc
     3301 caccgtggtg gtgatcttga gatcgccatt ggggcgctcg cggctgtcgg tcagtttggc
     3361 gcgcgcagat tcgagcttca tgaacacttc gtgcgccgtg cggtagagaa gctctccctg
     3421 ctcggtaagg atgaggccgc gcgcatggcg atggaacagc gagaccgtaa gctcttgttc
     3481 cagagcgctt acttggcgtg ataccgccga ctgcgacagg ccaagctgct cccccgcatg
     3541 cgtgaagctg ccggcctcgg cggcagcgtg aaacaccttg agcttgtccc aatccatgat
     3601 tgatcgaggt cgcgtctgcg aactccccct gcttgctgtg cgagcctcgg cccgcacgac
     3661 cggaatgcaa cactccggat ttacggtagt ctattcggcg gcgacgcttt ccatgtgttg
     3721 ggcagccaga aatcgttccg cctccaaggc cgccatgcag cccagcccgg cggccgtgac
     3781 ggcttggcgg tatacgtcat ccgttacgtc gccggctgcg aacacccccg gtaccgatgt
     3841 tgcagtcgag aacggtgctg tcttgatgta gccgttgggt ttcatttcga cctggccgcc
     3901 aaacaattcg ctcgccggtg aatgcccgat ggcaatgaaa atgccgtccg catgaatctc
     3961 ggtgatcgct tcggtcttca cgttcctgat cgcagcagct acaaccttgc gcgggctttc
     4021 gctgccgcgc acctcctgca acacgctgtt ccagatcact tcgatcttgg ggtggcgaaa
     4081 cagacgctcc tgtaggatac gttccgcccg gaacgcgtcg cggcgatgca ccaccgtcac
     4141 cttgttggcg aaattggtaa ggaacagtgc ttcctcgacg gcagtgttgc cgccgccaat
     4201 gacgatgacg ttcttgccct tgtagaaaaa gccgtcacaa gtcgcacagg cggaaacccc
     4261 atagccacga aacttctgct ccgtcggtag gtcgagccag cgcgcctgag caccggtcgc
     4321 gatcacgagg gagtcagcca tataggtatc gccggagtcg cacatgattc gaaacggtcg
     4381 ccttgcgagg tctaccttgc tggcatggtc aggcacgagc ctagtgccca catgcgcggc
     4441 ctgtttctcc atttgttcca tcaaccacgg gccttggatt acatcggcaa agcccggata
     4501 gttctccaca tcggtggtga cggtgagctg gccgcccggc tggagccctt gaatcatgac
     4561 gggctccagc atggcccggg ccgcatagat agcggccgtg tagccggccg gcccggagcc
     4621 gatgatgaca atcttggcgt aggtggtctt cgacatgtat tttctctttg ccattacggg
     4681 cgattctgtc gttaccgccg cgcgggaaat tcccgcgctt ggcactgctg catgagatgt
     4741 atgggttctg ccaaagctat gcaagaaacg caatccttat tcggtactga aagcgcccac
     4801 cgaacaaaaa cagatggaaa atgggtctct gagcgacagt ttctgtcatc ctgatgcttg
     4861 gctcggcttg gctcgacatc gaattgcgca ataatgtttc acaaacgcag tttccgttgt
     4921 aaataaaggt atgcgacgcc tggataccat tgaccgcgat atcttgcgcg aactgcagga
     4981 tgacggtcgc atcaccaacg tggaactcgc ccgacgggtt ggcatctcgg cgccgccgtg
     5041 cctgcgccgg gtgcgtagtc ttgaggaggc cggttatatc aaaggttatc gggcactgct
     5101 cgatgagaag gcgcttggct gcgaagtcac cgcgttcgcg atggtgcatt tggcgagcca
     5161 aacggaagcc gacctccagg ccttcgaggc ctttgtgcgg cgagagccgt tggtgcgtga
     5221 gtgttggatg ttgtccggcg aaatcgattt tgttctcaaa tgcgtggcgc cgagtctatc
     5281 caagtttcag gccttcgtga ctgatttgac cgccgcgccg catgtcctca atgtcaagac
     5341 ttccctcacc ttgcgcaatt ccaaggacac cccgatggtc ccggttgagc tgctgcgttc
     5401 ggggcctacc tgaccaagaa ttttagcgca gcaagctgtc acgccggaga taggcgctga
     5461 ggcgcgttgg cgcatgagtc tgattgcggg tttctctgcc gttcgatgta ttggcgaatg
     5521 atgctgatgg gcgcaccgcc acaggatgca gcaaaatagc
//
LOCUS       DATILV010000419         1833 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2910952, whole genome shotgun sequence.
ACCESSION   DATILV010000419 DATILV010000000
VERSION     DATILV010000419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1833)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1833)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1833
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2910952"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..489)
                     /locus_tag="VLJ17_09500"
     CDS             complement(<1..489)
                     /locus_tag="VLJ17_09500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017484250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HSV23251.1"
                     /translation="MTPPPESRSRRAVLKRLALLVGRSVLLSAPIAFARNANKPIFVD
                     QRSSMCGSPRADRRDASEGADEFAGVPGMPSARFWADSISDFEQALPQGSGPWLILSE
                     GGEDGAYGAGVLSGWTKEGSRPAFSVVTGTSTGALIAPYAFRGADYDDPLHQHYTRVT
                     AAD"
     gene            662..1306
                     /locus_tag="VLJ17_09505"
     CDS             662..1306
                     /locus_tag="VLJ17_09505"
                     /inference="COORDINATES: protein motif:HMM:NF025388.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4238 domain-containing protein"
                     /protein_id="HSV23252.1"
                     /translation="MSLSRFGSGRLPTAGRARSAACRSPAPRGPWSRFIASLMMRNPE
                     IVERSMLAAKALYDQSRTDLQADYAKHRNPTDPPTYEEYAALHSPNPAGRGGAILLQK
                     SIDHPDLGNHINNMRWTVLKANSPKFTLLTSDRPVLITNGLAYEHSQLILPISPFQVF
                     FATNTAHMEHYIEHVFARGQMIQQVIVARSGWVRGDYCICCSRCLGYLRGLGVR"
     gene            1511..>1833
                     /locus_tag="VLJ17_09510"
     CDS             1511..>1833
                     /locus_tag="VLJ17_09510"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSV23253.1"
                     /translation="MNLVFASGFLFPQSLLGIDYFRGLSGHIVQAGMPAPLFPKVPPI
                     GGFETRAQALADAIQQAYPVGPIHIIAHSMGGLDSRTLIGRNHHGLSDPGRIASLTTV
                     ATPHRG"
BASE COUNT          361 a          579 c          533 g          360 t
ORIGIN      
        1 atcggccgcg gtgaccctcg tgtagtgctg gtgcagggga tcgtcgtagt ccgccccacg
       61 aaaggcgtag ggggcgatta gggcgccggt gctggtgccg gtgaccaccg agaaagccgg
      121 ccggctgccc tccttggtcc aaccggagag cactccggcg ccgtacgcgc cgtcttctcc
      181 tccttccgac aaaatcagcc acggaccaga tccttgtggc aatgcctgtt cgaagtctga
      241 gatggagtca gcccaaaatc gcgcgcttgg cataccgggt acgcccgcga attcgtcagc
      301 gccctcactg gcatcgcgcc gatccgcgcg tggggagccg cacatgctcg atcgctggtc
      361 tacgaaaatc ggcttgttcg cgttgcgcgc gaacgcgatc ggggccgata ataacacgct
      421 ccggcccacc agcagggcga gtcgtttgag aacggctcgg cgggagcgag attcaggcgg
      481 tggagtcatg acggcacgct gggtcacacc catcatgcaa tgtatgcgga gtgccgggag
      541 ccaagggatc cgggagtccg tcctatgctt tgacatttgg acgctcctca tgcgacgcag
      601 ccgcgctggg ccggacatcc gctcgaagag ccgttgcgtt tcgagctgcg accgttttcc
      661 gatgagctta agcagatttg gcagcggacg cttgcccacg gcaggtcgag cgaggagtgc
      721 ggcctgccgc tcgccggcgc cgcgagggcc ctggtcccgg ttcattgcat cgctgatgat
      781 gcgcaatccc gaaatcgttg aacgtagcat gctcgccgca aaggcccttt acgatcagtc
      841 gcgcacagat ttgcaagccg actatgccaa gcatcgtaat ccaactgatc cgcccaccta
      901 cgaggaatac gcggcgctgc actcgcctaa cccggctggc cgcggcgggg caatcctgtt
      961 gcagaaaagc atcgatcatc ccgacctcgg caatcacatc aacaacatgc gttggacggt
     1021 gctcaaggct aacagcccga agttcacact tctaacttca gaccggcccg tcctaatcac
     1081 aaatgggtta gcatacgagc actcacagtt gattctcccg atatctccgt tccaagtttt
     1141 cttcgcgacc aataccgccc acatggaaca ttatatcgaa cacgtcttcg caagagggca
     1201 gatgatccag caagtaatcg tggcgcgcag cggatgggtt cgtggcgact actgcatttg
     1261 ctgcagccgc tgtcttggtt atctccgtgg tctcggggtg cgctagtgaa ggaggatgta
     1321 gaggccgaag ctaattcgtc gtacggcgac gacgaagatt gatcgttact ggccgcccgc
     1381 cgcccgccca tgccgtcctc gaccactacg cgtggcggca ccatcgccgc ggtctattcc
     1441 agatgccaat cgcagcgtga tttacgaatt cgccatggac aacaacattt cactgcaaag
     1501 gacgatcatc atgaatctcg tattcgcaag cggctttctg ttcccgcaaa gcctgctcgg
     1561 catcgactac ttccgcggtc tcagcggtca catcgtgcag gcgggtatgc ccgcgccgct
     1621 ttttcccaag gtgccgccga tcggaggctt cgagacacgg gcacaggcgc ttgcggacgc
     1681 gatccagcag gcctaccctg taggtccgat ccatatcatc gctcactcca tgggcggcct
     1741 cgacagccgc actctgatcg gacgcaacca ccatggccta tccgatcctg ggcggatcgc
     1801 atcgttgacc accgttgcga ctccgcatcg tgg
//
LOCUS       DATILV010000420        10984 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2910969, whole genome shotgun sequence.
ACCESSION   DATILV010000420 DATILV010000000
VERSION     DATILV010000420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10984)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10984)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10984
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2910969"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            103..930
                     /locus_tag="VLJ17_09515"
     CDS             103..930
                     /locus_tag="VLJ17_09515"
                     /inference="COORDINATES: protein motif:HMM:NF022750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HSV23254.1"
                     /translation="MPLIWLVARQAIASARAIVAIALLSFPFGMAYAQTKLTARYTLS
                     VADVAIGEGDWSVEIGKDRYTAQTNGRLFGFWRAILGGDLSATSRGTAYQGRLVPTIY
                     LANFSSDNNVNDVRVRFRDGAVSELETQPSVPAGPDRIPVTASLLRGAVDPLTAGLVS
                     TSAAGDVLSPAACQRTLPIFDGSQRFDMALSFKRMDNVRPDSGYRGPVIVCAMTYRPV
                     AGYVPDALRINYLKRSRDMEIWLAPVPGTRLLAVFCIRIPTALGTAELRANQFDGSR"
     gene            1173..1376
                     /gene="merF"
                     /locus_tag="VLJ17_09520"
     CDS             1173..1376
                     /gene="merF"
                     /locus_tag="VLJ17_09520"
                     /inference="COORDINATES: protein motif:HMM:NF033565.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mercury resistance system transport protein
                     MerF"
                     /protein_id="HSV23255.1"
                     /translation="MAQIRMLTVGLIAALAAIVCCFSPILAALFGAVGLSALTDYLDY
                     VPRPAIAILVALAFYTLVRKKAI"
     gene            1373..1576
                     /locus_tag="VLJ17_09525"
     CDS             1373..1576
                     /locus_tag="VLJ17_09525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDCCVxC domain-containing (seleno)protein"
                     /protein_id="HSV23256.1"
                     /translation="MILVSTIICPECGHRETERMALDACQFFYDCKGCGKRLRPKEGD
                     CCVFCSYGSVPCPPIQENRSCCA"
     gene            1720..2325
                     /locus_tag="VLJ17_09530"
     CDS             1720..2325
                     /locus_tag="VLJ17_09530"
                     /inference="COORDINATES: protein motif:HMM:NF037152.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HSV23257.1"
                     /translation="MNPQVRTKPDDTRGRIMATAEALFRRLGYAKTAVADIASELGMS
                     PANVYRFFPSKNAIVEAICQRCLAEVEDKAWAVARARGPAGQRVERLILEILAYHKEN
                     LLTEQRVNDMVVAAIELSWDAIRAHQEVMRTVVEVILRDGIAAGEFEPVEPHETATLI
                     LRSVVGFTHPMVIGQCLGEGQDLETQASATVRFILRAITPR"
     gene            2459..3601
                     /locus_tag="VLJ17_09535"
     CDS             2459..3601
                     /locus_tag="VLJ17_09535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSV23258.1"
                     /translation="MPSPISRPRTASPGLVRLRIVGAILAVLALAPALAACNDAATSA
                     TAPPARPVQVQRVVFAPAEENREFAGVVRARYETDLGFRVAGKIVARLVNVGDRVRAG
                     DVVARLDPRDLQLQVESADAELTAATSNLAQAAADELRYQNLRTRGYAAVAEYERKKA
                     AKDEAGGRMERAQRAFDLASNQLAYADLKADADGVITATLAESGQVVALGQAVARLAH
                     RGEMEAAVALPETRLSEARQSEASVRLWSDPDRRFSARLRELSPQADAATRTYAARFT
                     VENPDDTVALGMTATVVLSRPAETMVAKVPLAAILNRGTGPTVYRVDDAGVLERRPVI
                     VSSFNEVAALITSGLQDGDEIVTLGVQMLEAGQKVRAVLGRAIDGR"
     gene            3632..6769
                     /locus_tag="VLJ17_09540"
     CDS             3632..6769
                     /locus_tag="VLJ17_09540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSV23259.1"
                     /translation="MRRFNLSEWAITHRALVLFMILILGAAGAYSYLNLGRAEDPSFT
                     IKNMIVSVAWPGATATEMQTQVADKIEKKLQELPWLDRVETYSQPGVSFIQVILIDRT
                     PPAKVKDLWYQVRKKVGDIRGDLPAGITGPTFNDEYGDVYSTIYMLTADGLSLADLKA
                     RAEDIRQRLLRVPNVNKVDFIGDQPEKIFVEFSHAKLATLGITPQQVFDSVIKQNAVQ
                     AGGAVDTSADRVNLRVTGGFTGLDAIRAVPVEANGRVFRLSDIAIGKRGYQDPPAFLV
                     RQDGKPALGLGVSMQDGANIITLGEDLKGAMQAITAELPVGIEVTQIADQPHIVEHSI
                     SEFVETFVEALGIVLLVSFISLGWRTGIVVALSVPLVLAIVLTLMYAAGVDLHRITLG
                     ALIIALGLLVDDAIIAIEMMVVKMEQGFDRASAATFAWTSTAFPMLTGTLVTAAGFLP
                     VGFAKSSAGEYAGGIFWVVGLALLASWIVAVMFTPYLGLKLLPNLAQARSLDNPDAIY
                     DTRIYRTLRRAIEFALRWRRSVVALTVLTFLASIAAFGFVQQQFFPTSTRTELFLEMR
                     LPEGTAIGVTDATAKKAERLLASDPDIAMYTSYVGQGSPRFWLGLNPVLPNPNFAQIV
                     IVTKDLAGRERVKTRLDHALADGALPEARTRVDRFNFGPPVGFPVQFRVVGPDPMRVR
                     AIAADVRAVMATNRKIIDPHLNWGEQVKSIRLEVDQDRARAMGLTPQEVAQNLQTLLS
                     GYTITQYREGIEHIDVVARAIPEERLDLDRLPTLTIATRNGVAVPLSQFARLNYEYEE
                     PILWRRNRDTVLTVRGDIVDNVQAPDVTNEVLPKLKPIKDALPHGYRIETGGSIEESV
                     KANGALVAVFPVMAIVMLSLLMIQLQSFSRLALVFATAPLGLIGATSALLISNRPFGF
                     VALLGLIALAGMIMRNTVILVDQIERDIAAGHGRHRAIVDATVRRARPVALTAFAAIL
                     GMVPLARNIFWGPMAITIMGGLFVATVLTLLVVPALYALWFGVRESEAAPAVLAAGAP
                     DDFDGRLAPSRIAAE"
     gene            6821..7135
                     /locus_tag="VLJ17_09545"
     CDS             6821..7135
                     /locus_tag="VLJ17_09545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23260.1"
                     /translation="MKGLMCGAALLAASVVTCAASEQRAAPRDSSAIAQFTYSWVAMP
                     PLPRRYQNHCGDRDGQLVCSDHCGVDYQIYYCSKTVTGCCHIGRGYCDGTGKLRCSPA
                     LF"
     gene            7274..8104
                     /locus_tag="VLJ17_09550"
     CDS             7274..8104
                     /locus_tag="VLJ17_09550"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV23261.1"
                     /translation="MSTFDKFKVLVADDAETVHAFFSKIAQESPIPFKVIGAFNGLEC
                     MKLLKDGRINLAFIDVNMPGMTGTQVVSAARHEGIKTFVTLISGNSNKRRLRLARHLK
                     VYEYLIKPFSAEDVYAILRTYSRVCLRTRVLIVDGSATTRRLINKVLSGSVFNVDITE
                     VSDCGHALARCEVNEFDFVMLDYDMLETDGLDTLKRMIERHPKIKVIMMSGNPDEQQQ
                     RRALDCGATAFLRKPFYPKDIDRELHSLFNLKMPMLANTEDLEEEDLEEEVLHRTSHA
                     "
     gene            8709..10685
                     /locus_tag="VLJ17_09555"
     CDS             8709..10685
                     /locus_tag="VLJ17_09555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HSV23262.1"
                     /translation="MTTPDAGADTFAKLLARNAARLPNRPAMRHKDLGIWHTWTWAQL
                     LAEVRAYAAGLSRLGLTRGDRIAIVGANRPKLYWSIMAAQALGAIPVPVYADAVADEL
                     AFVLAHADVRFAAVQDQEQVDKLLSVSERLPTITHILYDEPRGLRGYDHTRLHPIAQI
                     IQDGHAVLANDGAVGRQLDDEIAAGKGSDISIILYTSGTTGTSKGVMLSAAGCIAAAS
                     DTVAFDRLDESDAALAYLPLAWVGDHYLNYAQGLVAGFCMACPESSETALADIREIGP
                     TFFFAPPRVFEQMLTRVTIRMEDAGRLKRAIFRYFIGVARRCGEKLLNREHVPVVGRI
                     LYAVGKVAIYAPLMNVLGLSRVRVAYTAGEAIGPELFSFYRSLGLNLKQLYGQTEAFL
                     YVTAQPDGQVLSDTVGPAVPNVDLRIADNGEVQFKSPGMFVGYFRDEPKTREALTPDG
                     YVKTGDAGFIDPVTGHLKIVDRANDVGLLADGTLFAPKYIENKLKFFPNIREAVAFGD
                     GRPFAAVMLNIDLAAVGDWAERNAIAYGSYQELAGHPLVYEVLAQHVAEVNRALAVEQ
                     VMTGAQIRRFLVLHKELDPDDGELTRTQKVRRSFVAERYAPLVTALYDGSAEATIATE
                     VTFEDGRRGTIAARVKIMDMQVGLPATAAHEKAA"
     gene            10682..>10984
                     /locus_tag="VLJ17_09560"
     CDS             10682..>10984
                     /locus_tag="VLJ17_09560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016840292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSV23263.1"
                     /translation="MSGPRVCAPSPPGGGEKSLSRDGVVNCAHKPLLSVDSVSLSFGG
                     VKALTEVSFGIDGGEIRAIIGPNGAGKTSMLNVVNGFYHPDHGAITFKGRTRAKMQP"
BASE COUNT         2052 a         3355 c         3374 g         2203 t
ORIGIN      
        1 tcgtactcat cggcgcgccg tctttagagc aaccttgtcg gaagatatcg gaacgtcgat
       61 ttggtccacc tttgcatttc cagccgctgc cggaacgggg ccgtgccatt gatttggctt
      121 gtcgctcgac aagcgatcgc gagcgccaga gcgatcgtgg cgatcgcgtt attgtcgttt
      181 cctttcggca tggcgtatgc acaaacgaag ctgacggcgc gctacacgtt gtccgtggcc
      241 gacgtcgcaa tcggcgaagg cgattggtcc gtggagatcg gtaaggaccg ctatacggct
      301 caaaccaacg gccgactgtt cggcttttgg cgcgccatcc tcggcggcga cctatctgcc
      361 acgtcgcgag gcacggcgta tcaaggtcgc ctcgtgccga ccatctattt ggccaatttt
      421 agctcggaca acaacgtcaa cgatgtccgc gtgaggttcc gcgatggcgc tgtgagcgag
      481 ctggaaaccc aaccgtcggt cccggccggc cccgatcgta ttccggtcac cgcctcgctg
      541 ctccgcggcg ccgttgatcc gttgacggca ggcctcgttt cgacgtccgc ggccggggat
      601 gtcctctcgc cggcagcctg ccaacggacc ctgccgatct tcgacggcag ccaacgcttt
      661 gacatggcgc tgtcgttcaa acgcatggac aacgtcaggc cggacagcgg ctatcggggg
      721 ccggtgattg tgtgtgccat gacgtatcgg ccggtcgccg gatacgtacc ggacgccctt
      781 cggatcaatt atctcaaaag gagccgcgat atggagatat ggctggcgcc ggtccccgga
      841 acgcgcctgc tggcggtgtt ctgtatcagg attcccaccg cgctgggaac ggcggaactg
      901 cgggccaatc agttcgacgg cagccggtag gctctattgc cagattgcca gccttgtaag
      961 cggggaaggg aacgtctgcc aattcgttcg gtgtcgcgca cctcgatgat tttgatccga
     1021 tcatctacca ccaagctgga ttgcaatgag atgcaagtct gattccggaa tatgttgttc
     1081 ggtcttgcgg tcgaaacctg cattcctcat gtggccagtg tttcgacgct gcggtagttt
     1141 gcagccttga ggcaatgcgg tactgttgcg gcatggcgca aattcgcatg ctgactgtcg
     1201 gcctcatcgc ggccctggcc gcaatcgtgt gctgcttctc tccgattttg gcagccttgt
     1261 ttggcgctgt cggattgtcc gcgttgacgg actatctcga ttacgtgcct cgtcctgcca
     1321 tcgctatttt ggttgcgctc gctttctata cgttggttcg gaagaaggcc atatgatcct
     1381 ggtatcgaca atcatttgtc cggagtgcgg acatcgggag accgagcgca tggcgctcga
     1441 tgcgtgccag tttttctatg actgcaaggg gtgtggcaag cggcttaggc ctaaggaagg
     1501 cgactgttgt gtattctgtt cctatgggtc ggtgccgtgt ccaccgattc aagagaaccg
     1561 atcctgttgc gcctagtttt ctcagctggc tcgccggtaa cacaggtgtg atcaagcggt
     1621 ttttctgatc ggcttgacgt tgagtgactg acgaattata aaattcgtca gtcttcagga
     1681 tgccggcgag ccgttggctt accgcagcag ggttacgcca tgaatccaca ggtcagaacc
     1741 aaaccagacg atacccgtgg gcggatcatg gcaaccgccg aggcgctgtt ccgtcggctc
     1801 ggttacgcca agaccgcggt ggcggacatt gcgtctgagc tcggcatgtc gcccgccaac
     1861 gtttaccgct ttttcccttc caagaacgcg atcgttgagg cgatctgcca acgctgcctg
     1921 gcggaggtgg aagacaaggc ctgggcggtg gcgcgtgcca gggggccggc cggtcagcgt
     1981 gtagagcggc tgatcctcga aattcttgcc taccacaagg aaaacttgct caccgagcag
     2041 cgcgtcaacg acatggttgt ggcggcgatc gagttgagct gggacgccat tcgggctcac
     2101 caggaggtca tgcgcactgt ggtagaagtg atcctgcgcg acggcatcgc ggccggagag
     2161 ttcgagccgg tcgagccgca cgaaaccgct accttgatcc ttcgctcggt agtgggtttc
     2221 actcatccta tggtgatcgg gcagtgcctg ggggaaggcc aggacctcga aactcaagcc
     2281 agcgcaaccg tccggttcat tctccgcgcc atcactcccc gatagtccca tgttgaactc
     2341 ggccatagca cgaatttgtc tgacgtgtga caaaaattgg atttcgtcaa tcattattat
     2401 tcagccacca ctacacccac gtaggggccg caacgagcgg ccgcaaagga gtgccaccat
     2461 gccctcgccg atctctcgcc cgcgcaccgc aagcccaggt ctcgtaagac tacgcatcgt
     2521 gggggcgatc ctggccgtgc tcgcactcgc tccagcgctt gcggcttgca atgacgccgc
     2581 aacctccgca accgcaccgc cggcgcggcc cgtgcaggta cagcgcgtgg tgtttgctcc
     2641 ggcagaggaa aatcgtgaat tcgccggcgt ggtcagggcg cgctacgaga ccgatctcgg
     2701 cttccgtgtc gctggcaaga tcgtggcccg gcttgtcaat gtgggcgaca gggttcgagc
     2761 gggcgatgtg gtggcgcggc tcgatccgcg cgatctccaa ctgcaagtgg aaagcgccga
     2821 tgccgagctg acggccgcaa cgtcgaatct tgctcaggcc gccgccgatg aattgcgcta
     2881 ccagaacctc cgaacccgcg gctatgcggc ggttgcggaa tacgagcgca agaaggctgc
     2941 caaggacgag gctgggggcc gtatggagcg ggcgcagcgg gcgttcgacc tggcgagcaa
     3001 tcaactcgct tatgccgacc tgaaagccga cgccgacggc gtgattaccg caacgctcgc
     3061 tgagtccggc caggtggtgg cgctgggcca ggcggtcgcg cgacttgcac atcgcggtga
     3121 aatggaggcc gcggtcgcgc tgccggaaac gcgtctcagc gaggcacgcc agtcagaagc
     3181 cagcgtgcga ttgtggtcgg acccggatcg aaggttttca gcgcgattgc gcgaattatc
     3241 gccgcaagcc gacgccgcca cccggactta tgcggcgcgg ttcaccgttg agaatcccga
     3301 cgacacggta gcgcttggta tgacggcgac cgtcgtgctg tcgcgcccgg ccgaaacgat
     3361 ggtggccaag gtgccgctcg ccgccatcct caaccgcggc accggcccta cggtttatcg
     3421 cgtcgacgac gccggcgtgc tggaacgccg gcccgtcata gtgtcgtcct tcaacgaggt
     3481 cgcggcgctc atcacctcgg gcctccagga cggcgacgag atcgtcaccc tcggggtaca
     3541 gatgctggaa gccggacaaa aggtccgcgc cgtcttgggg cgcgccatcg acggccgctg
     3601 aagccacatc cgcctgaaag gaatcctcac catgcggcgc ttcaatctct ccgaatgggc
     3661 gatcacgcac cgtgcgttgg tgctgttcat gatcctgatt ctgggcgcgg ccggcgcata
     3721 ttcctatctt aatctcggtc gtgccgagga tccttcattc accatcaaaa acatgatcgt
     3781 gagcgtcgcg tggccgggcg ccacagcgac cgagatgcaa acccaggtgg cagacaagat
     3841 cgagaagaag ctgcaggaac taccctggct cgaccgcgtc gaaacctatt cgcagccggg
     3901 cgtatccttc atccaggtca ttctcatcga tcgcacgccg cccgccaagg tgaaggactt
     3961 gtggtaccag gtacgcaaga aggtcggcga catcaggggc gacctgccgg ccggaatcac
     4021 gggcccgact ttcaacgacg aatatggcga tgtctattcg acgatctaca tgctcacggc
     4081 cgacggtctc agccttgcgg atttgaaggc gcgagccgag gatatccgcc agcgtctgct
     4141 gcgtgttccc aacgtcaata aggtcgattt catcggcgac cagccggaaa aaatcttcgt
     4201 cgagttcagt cacgccaagc tggcgacgct cggcatcaca ccacaacagg tattcgacag
     4261 tgttatcaag caaaacgcgg tgcaggccgg cggggcggtc gacacttcgg ccgaccgcgt
     4321 gaatctacgg gtgaccggcg gcttcacggg cctcgatgca attcgggcgg tgccggtcga
     4381 ggctaatggc cgcgtgtttc ggctgagcga catcgccatc ggaaagcgcg gttaccagga
     4441 tccgcccgcc ttcctggttc gccaggatgg caagccggcg ctcggtctcg gcgtgtccat
     4501 gcaggacggc gccaacatca tcacactcgg cgaagacctc aagggcgcca tgcaggcgat
     4561 caccgccgag cttccagtcg gcatcgaggt cacccaaatc gccgatcagc cccacatcgt
     4621 cgaacactcg atctcggaat tcgtcgagac cttcgtggag gcgctcggta tcgtgctcct
     4681 ggtcagcttc atctcgctcg gttggcgcac cggcatcgtg gtggcgcttt cggtgcctct
     4741 agtgctggcg atcgtgctca ccttgatgta tgcggccggc gtcgatcttc accgcatcac
     4801 gctcggagcg ctgatcatcg cacttggtct tctggtcgac gacgccatta tcgctatcga
     4861 gatgatggtg gtgaagatgg agcagggctt cgaccgtgcc agcgccgcga ccttcgcgtg
     4921 gacctcgacc gcgttcccga tgctgaccgg cacgctggta acggcagcgg gcttcctgcc
     4981 ggtcggcttc gcgaaatcga gcgcgggcga atatgcgggt ggcattttct gggtcgtcgg
     5041 cctcgccttg ctggcgtcgt ggatcgtagc cgtgatgttc acgccgtatc tcggcctgaa
     5101 gctcttgccc aatttggccc aggcccgctc gctcgataat ccggacgcca tttatgacac
     5161 ccgtatttac cgtaccctgc gccgtgccat cgaattcgcg ttgcgctggc gccgcagcgt
     5221 cgtcgccctc acggtgctga catttttggc gtcgatcgcc gctttcggtt tcgtccaaca
     5281 gcagttcttc cccacttcga cccgtaccga actgttcctc gaaatgcgat tgcctgaggg
     5341 taccgccata ggcgttactg atgcgaccgc aaaaaaagcc gagcggctac tcgccagcga
     5401 tcccgacatc gcgatgtaca ccagctatgt gggccaaggc tcgccacgct tctggctcgg
     5461 gctcaatccc gtgttgccga atccgaactt cgcgcaaatc gtcatcgtga cgaaggacct
     5521 ggccggacgc gagcgcgtca aaacgcggct cgatcacgcg ctcgccgacg gcgccctgcc
     5581 ggaggcccgc acccgggtcg atcgcttcaa ttttggcccg ccggtgggtt tcccggtcca
     5641 gttccgggtg gtcgggcccg atcccatgag ggtgagggcg atcgccgccg acgtgcgcgc
     5701 cgtcatggcg accaatcgaa aaattatcga tccgcacctc aattggggtg agcaggtgaa
     5761 atcgattcgc ctcgaggtcg atcaggaccg cgcccgggcc atggggctga cgccgcaaga
     5821 ggtcgcccaa aatctgcaga ccctgctgtc tggctacacc atcacccaat atcgcgaggg
     5881 catcgaacat atcgatgtgg ttgcccgagc gattccggag gagcgtctcg acctcgatcg
     5941 cttgccgacg ctcaccatcg cgacgcgcaa cggcgtcgcg gttccgctgt cgcagtttgc
     6001 gcggctcaac tacgaatacg aggagccgat cctgtggcgg cgcaatcgcg acaccgtcct
     6061 taccgtgcgc ggcgatatcg tcgacaatgt gcaggcaccc gacgtgacca acgaagtgct
     6121 gcccaagctg aaacccatca aggacgcgct tccccacggc tatcgcatcg aaaccggcgg
     6181 ctcaatcgag gagagcgtga aggcgaacgg cgccctggtg gcggtgttcc ccgtcatggc
     6241 gatcgtgatg ctgtcattgc tcatgatcca actccagagt ttttcgcgat tagcgctggt
     6301 gttcgcgacg gcgccgctgg ggctcattgg agccacgagc gccttgctca tctccaaccg
     6361 gccattcggc ttcgtggcgc tgttggggtt gatcgccctc gccggcatga tcatgcgcaa
     6421 caccgtcatc ctggttgacc agatcgaacg cgacatcgcg gccgggcacg ggcgccatcg
     6481 ggccatcgtg gacgccacag tgcgccgcgc ccggccagtg gcgcttaccg ccttcgctgc
     6541 catcctcggc atggttccgt tggcgcgaaa tatcttctgg ggtccgatgg cgatcaccat
     6601 catgggcgga ctgttcgtcg cgaccgtcct cacgctcctg gtggtgccgg cgctctatgc
     6661 actgtggttc ggggttcgcg aaagcgaggc cgcgccggcc gtcctggccg ctggcgcacc
     6721 cgatgatttc gatggccggt tggcgccgtc gcggatcgca gcggagtgac gcggcttcgt
     6781 cgaatctgat acaacggccg ccgaaaatgg aggcggcagg atgaagggat tgatgtgcgg
     6841 ggcggcgctg cttgccgcca gtgtggtgac atgcgcggcg tcggaacagc gagccgcgcc
     6901 gcgtgattcg tcggccatcg cgcaattcac ctatagctgg gtggcaatgc caccgctgcc
     6961 gcgccggtat cagaaccatt gcggcgaccg cgacgggcaa ctcgtttgtt ccgaccactg
     7021 cggcgtcgac tatcagattt attattgttc gaagaccgta accggctgct gccatatcgg
     7081 gcgcggatat tgcgatggca ccgggaagct gcgctgcagc cctgcactat tctgatgcct
     7141 ttccgggcgg tcgaagctct tgtcgtcgtc cgccggtcgc gtcgccggca acggtatctt
     7201 taccgcctta gtataagaaa acaggctcgg cggtacgtcc cataagcgtt gtcacagcct
     7261 ggccaggacg atcatgtcca cattcgataa gttcaaggtt ctcgttgcgg atgacgccga
     7321 aaccgtccac gctttttttt ctaagatagc gcaagaatcg ccaattccct tcaaggttat
     7381 tggcgcgttc aacggcctgg agtgcatgaa gctccttaaa gatggaagaa tcaacctcgc
     7441 gtttatcgac gtcaacatgc cgggcatgac gggaacgcaa gtcgtcagtg ccgcccgcca
     7501 cgaggggatc aagactttcg taacgttaat atcgggcaat tcgaataaac gacggctgcg
     7561 gcttgcacga catctgaagg tttacgagta tctcatcaag ccattcagcg ccgaagatgt
     7621 ttatgcgatc ctgcgaacct acagcagagt atgtttgcgc acacgcgtgc tgatcgtcga
     7681 tggttccgca actactcgtc gcctgatcaa caaggtgttg tcggggagcg tgttcaacgt
     7741 ggatatcacc gaggtcagcg actgtggcca tgccctggcg cgctgcgaag tcaacgaatt
     7801 cgacttcgtc atgcttgact atgacatgct cgagacggac gggcttgaca ccttgaagcg
     7861 catgatcgaa cggcatccca agatcaaagt gattatgatg tcgggcaatc ccgacgagca
     7921 gcagcagcgt cgggcgcttg attgtggcgc gaccgcgttc cttcgcaagc cattctatcc
     7981 gaaggacatc gaccgagaat tgcatagttt attcaatttg aagatgccga tgctggccaa
     8041 caccgaagac ctggaagaag aagacctgga agaagaagtt ctgcacagaa ccagccatgc
     8101 ataaaggcga ccggcggttg tcgtttcgtg cacgacactg gaatcgcgaa tgtcggatca
     8161 gaccggctat gatggtcgca atgtcgcctc cgagcaacgg cagaccgaga gccgtgcgcc
     8221 gccgcgcgta attcgtcgtc gagggtagct aacgggaggc tgcgccgcgt ggcaagctca
     8281 agctaagcgg cgtcatagac ggtcagttgg aagcgggggt cggcgaggct cagcgtttcg
     8341 tcccgagcgc aagatcagaa agcgatgcgg ggcgcaagac gcacagccac cgtgaggcta
     8401 ttggcgacct ccaaccgcca aagcgacggt acgaacgcgc cctcatggcc accgcgaaac
     8461 cgacacgccc agcacgtccg ctgccgcgca acaattctct ccatattgcg gagaattgca
     8521 ttgattcgcg cagattgcaa aattactatt ttagtccctg ctccaccaag tcgagttacg
     8581 gaacgctttc cgcatcggtt tcgaaattat taccgacgaa taacgggcgc acgcctgtca
     8641 cactgattcg gacaaaaatg cgattccctg ttaacttctt cacaatcagg aatgccggaa
     8701 gggccgcggt gacaacaccc gacgctgggg cggatacatt tgcgaaattg ctggcgcgca
     8761 acgccgcgcg cctccccaat cgtccggcga tgcggcacaa ggatttgggc atttggcata
     8821 cttggacctg ggcgcaattg ctggctgagg tccgcgccta tgcggccggc ctgtcccgcc
     8881 ttggcctcac gcggggtgac cgcatcgcga tcgtcggcgc caatcggccc aagctctatt
     8941 ggtcaatcat ggcggcgcag gcgctcggtg ccatcccggt gccggtatat gccgatgcgg
     9001 tcgcggatga gcttgcattc gtcctcgccc atgcggatgt ccgttttgcc gccgtccagg
     9061 accaggagca ggtcgacaag ctgctctcgg tgtccgagcg cttaccgacc atcacgcata
     9121 ttctctatga tgagccgcgc gggctccgcg gctatgatca cacccggctg catccgattg
     9181 cacaaatcat ccaggatggc cacgccgtgc tggcgaatga cggcgcggtc ggccgtcagc
     9241 ttgacgatga gatcgcggcc ggcaagggct ccgacatttc gatcattctg tacacatccg
     9301 gcacgactgg cacctccaaa ggcgtgatgc tgtcggccgc cggctgcatc gcggcggcgt
     9361 ccgacacggt tgcgttcgat cggcttgacg aaagcgacgc agcgctcgcc tatctgccgc
     9421 tcgcctgggt cggcgatcat tatctcaatt acgcgcaggg gttggtggcg ggcttttgca
     9481 tggcctgccc agagagcagc gagaccgcgc tggctgacat tcgggagatc ggcccgacct
     9541 tcttctttgc gccgccgcgc gtattcgagc aaatgctcac gcgtgtcacc atccggatgg
     9601 aggatgctgg ccgcctcaag cgggcgatat ttcgctattt cattggcgtc gcgcgacgct
     9661 gtggcgagaa gctcctgaac cgcgagcacg tgccggtcgt cggtcggatt ctgtatgcgg
     9721 tcggcaaggt cgcgatctat gcaccgctga tgaatgtgct cggcctgtct cgggtacgcg
     9781 tcgcatacac ggccggcgag gcaatcggtc ccgaattgtt ttcgttctat cgttcgctcg
     9841 gcctcaacct gaagcagctc tatggacaga ccgaagcctt cctctatgtg acggcgcagc
     9901 ccgacgggca ggttctctca gacaccgtcg gccccgcggt ccctaatgtg gacctgcgga
     9961 tcgccgacaa cggcgaagtg caattcaagt cgcccggcat gttcgtcggg tatttccgcg
    10021 acgagcccaa gacccgagag gcgctgacgc ccgacggcta cgtcaagacc ggcgatgcag
    10081 ggttcatcga tccggtcacg gggcacttga agatcgtcga tcgcgccaac gacgtcggtt
    10141 tgctcgccga cggcacgttg tttgcgccga aatacatcga gaacaagctc aagttcttcc
    10201 cgaatattcg ggaagcggtc gcgttcggag acggtcgtcc atttgcggcc gtgatgctca
    10261 atatcgacct tgcggcggtc ggcgactggg ccgagcgcaa tgccattgcc tacggctcct
    10321 accaggaatt ggccggccat ccgctggtct acgaggtgct ggcgcagcac gtcgctgagg
    10381 tcaaccgcgc gcttgcggtc gagcaagtga tgacgggcgc ccagatcagg cgcttcctcg
    10441 tcctgcacaa ggagcttgat cccgacgacg gcgagttgac tcgtacccag aaggtgcggc
    10501 gcagtttcgt ggccgagcgc tacgcaccgc tcgtgacggc gctctatgac ggctctgcgg
    10561 aggccaccat cgcgaccgag gtgacgtttg aggacggtcg tcgtggcacc atcgcggcgc
    10621 gggtcaagat catggacatg caagtggggt tgccggccac cgcggcgcac gagaaggctg
    10681 catgagcggg ccgcgagttt gtgctccctc cccaccaggg ggaggagaaa agagcctctc
    10741 tcgggatggt gtcgtcaact gcgcgcataa accgctcctc tccgtcgaca gcgtctcgct
    10801 gtcgttcggc ggtgtgaaag cgttgaccga ggtatccttc ggcatcgacg gcggagaaat
    10861 ccgcgccatt atcggcccca acggcgccgg caagacctcg atgctcaacg tcgtcaacgg
    10921 cttctatcat cctgatcatg gcgctatcac cttcaaaggg cgcacccggg ccaagatgca
    10981 gccc
//
LOCUS       DATILV010000421         6636 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3168924, whole genome shotgun sequence.
ACCESSION   DATILV010000421 DATILV010000000
VERSION     DATILV010000421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6636)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6636)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6636
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3168924"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1212)
                     /locus_tag="VLJ17_09565"
     CDS             complement(<1..1212)
                     /locus_tag="VLJ17_09565"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HSV23264.1"
                     /translation="MGLTVRQTPATVEIVDQQTMKDRGYRTTPETVQDAAGVLSLDAA
                     GAPAGFSMRGFDFSQVNVLYNGIKIGPQSFTSRVMDTANLDRVEFLKGPAALISGDGA
                     IGGTVNYVSRQPTAGPIQNEAFISADYLGSIRSGLISTGSTSLAGLDYYFGISQDRVN
                     SYIDGDHKDFTNLSTRFNYRMSEVFRTFFAVEYRKDGGNSYWGTPVVPAAFAGPFATN
                     GIVSGTAFSHSFNGNFLGPVTIDSRTLRTNYNVLDNSTGATELWLRGGFEWALSDNVT
                     LKNQAYGYHAKRSWLDSETYAFNTDTGTVDRDRFFVSHDQKVFGDITELVWNSQVFGM
                     ENRFAAQLAASRNDILFTEDFGGFPQDTVALVAPDRGFYGPFTDLETRTNHLDQVAGA
                     FEDRLKITPTFA"
     gene            complement(2006..2725)
                     /locus_tag="VLJ17_09570"
     CDS             complement(2006..2725)
                     /locus_tag="VLJ17_09570"
                     /inference="COORDINATES: protein motif:HMM:TIGR01352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HSV23265.1"
                     /translation="MTSLATPFGNLRHDAMRWGICFALAIAAHGAAAWALLLNPSSDS
                     DFDAGAPVVMIELPKAPAAFATPPSDLTPGPTEPESERTPPPKEETKPPEEVAEVALP
                     EPERPKPQPPTEEKPPTAMPSIVMTPAPAPPVAGAAVQPADPVVRRWESALFAHLERF
                     KRYPAEARARGQQGLAKVAFTLDRAGQVRESRILQTSGSPELDQESLAMLTRAQPMPK
                     PPSQVQTSELSFVVPIRFNIR"
     gene            complement(2722..3141)
                     /gene="exbD"
                     /locus_tag="VLJ17_09575"
     CDS             complement(2722..3141)
                     /gene="exbD"
                     /locus_tag="VLJ17_09575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015291 - secondary active transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein ExbD"
                     /protein_id="HSV23266.1"
                     /translation="MSIRIEHGEDLGVIHDINVTPFIDVILVLLIIFMIAAPLATVDV
                     AVDLPASNARPQPRPDQPIFLTIRADLSLALGDAPVSRAGLQSALDAMSNNDRTQRVF
                     LRADKAVAYGSLMDTMNALRAAGYRKVALVGLEADSR"
     gene            complement(3138..4175)
                     /gene="exbB"
                     /locus_tag="VLJ17_09580"
     CDS             complement(3138..4175)
                     /gene="exbB"
                     /locus_tag="VLJ17_09580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020085589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_function: GO:0015291 - secondary active transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tonB-system energizer ExbB"
                     /protein_id="HSV23267.1"
                     /translation="MDDTHLQRVTVRMAGSVCLISRSFRGGLIGLAVTCSVVAGHGQA
                     AAQSSVPPAITAPAAPVAAPAVPTPAATTPSTVRAPAAADDISAPGAPLPVPPPTEIT
                     PAELPRDLTPWGMFMSADIVVKAVMLGLVFTSVLTWTIWLAKTLELAVARRRLARSHK
                     MLAAARSLAEAIRQARAASPHVALLIRAAESELRRSPDLRDADGIKERVAARFERIEA
                     GVGRQMMRATGILATTGATAPFIGLFGTVWGIMNSFIGISKLHTTNLAVVAPGIAEAL
                     LATAFGLAAAIPAVVIYNAFARSIAHYRALYADASVEILTLVSRDLSQPRQGADDKPV
                     LAAVPSSGAAR"
     gene            complement(4429..5298)
                     /locus_tag="VLJ17_09585"
     CDS             complement(4429..5298)
                     /locus_tag="VLJ17_09585"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HSV23268.1"
                     /translation="MVGSGRYIAYRSLLSRLVNPTCSLTSVTLIVLGIGVAAAAQVPS
                     LEPEEEYGEFLARPEELASLAVNDIARSLRLTGGAMSLGKKVYAKHCAMCHGADLKGI
                     PDEHTPDLTDADWRFSGDDLASGGNVKFPSDVEWTVRYGIRSDNPNARGLEADMLAYD
                     PQYRTEEDIKEFGSEAFLTPEEIKDVVEYVLQISGQQADTARAARGKVLFLDGAKGNC
                     FDCHGTDGTGSDPIGSTNLTRKDLYLWGSDRASILESITRGRRGVMPAFDGTLKPEEI
                     KAVSVYVFSHARR"
     gene            complement(5554..>6636)
                     /locus_tag="VLJ17_09590"
     CDS             complement(5554..>6636)
                     /locus_tag="VLJ17_09590"
                     /inference="COORDINATES: protein motif:HMM:TIGR01845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HSV23269.1"
                     /translation="ATFNLFTGQVLVSYTPDVFGGIRRNVESLEAQSDNQRFLLEATY
                     LTLTSNIVVAAVQEASLRGQIDATQSLIKIATNVLQLLRTQFNAGQIAESDVATQQAA
                     LAQVEQTLPPLQRQLAQQRHLLSALTGGLPSEEPPEKFELAALHLPRDIPVSVPSHLV
                     QQRPDLRAAEENLHAVSAQIGVAVANRLPNVTLTGNVGSTAPMIDQLFSPGTGAWAIT
                     GSLLQPIFHGGTLYQREVAARAAFEQATAQYRSTLVTAFQNVADSLSAIQNDAVALQK
                     SVAAETAANRVLVITRRRLELGEVNFLQVLVAQQFYLQALLARVQAQANRFADTVALF
                     QALGGGWWNRNDLDPPKQYPFFNLTD"
BASE COUNT         1298 a         1964 c         2052 g         1322 t
ORIGIN      
        1 ggcgaacgtg ggtgtgatct tcagacgatc ttcgaatgcc cctgcgactt ggtccaggtg
       61 attggtcctg gtttcgaggt ccgtgaacgg gccataaaac ccgcgatccg gagcaaccag
      121 cgcgaccgtg tcttgaggaa agccgccaaa gtcctccgtg aagaggatat cattgcggct
      181 tgcggcaagc tgcgcagcga agcggttttc catgccgaat acctgggagt tccagacgag
      241 ttctgtaata tcaccgaaca ccttctggtc atgcgaaacg aagaaacggt cgcggtcgac
      301 ggtcccggtg tcggtattga atgcataggt ctcgctatcg agccaactcc gcttggcgtg
      361 atacccatag gcctgatttt tcagcgtgac gttgtcgctg agcgcccact cgaaaccacc
      421 tcgcagccag agttccgtgg cgccggtgga gttgtcgagc acattgtagt tggtcctgag
      481 agtgcgcgag tcgatcgtca ccggtccgag aaagttgccg ttgaacgagt gggagaacgc
      541 ggtgcccgag acgatgccgt tggtcgcaaa cggaccagcg aatgcggccg gaaccaccgg
      601 tgtgccccag tacgagttgc cgccgtcttt tcggtattcg accgcaaaga acgtcctgaa
      661 aacctcggac atgcgataat tgaaccgcgt ggagaggttc gtgaaatctt tgtggtcacc
      721 gtcgatgtag ctgttgaccc ggtcttggct gatgccaaaa taataatcta gccctgcgag
      781 cgaggtgctg ccggtggaga tgagtcccga gcggattgaa ccgagataat ctgcagagat
      841 aaacgcctca ttctggatcg gtccggccgt cggttgtctg gacacgtagt tgaccgtgcc
      901 gccgatcgcg ccgtctccgg atattagcgc cgcagggcct ttcaaaaatt cgacgcggtc
      961 cagattggcg gtatccatga cccgcgaggt gaagctctgc gggccaatct taatcccatt
     1021 ataaagtacg ttgacctggc tgaagtcgaa cccgcgcatc gaaaagcctg ccggcgcgcc
     1081 ggccgcgtct agcgacaata cgccagccgc gtcttgtacg gtttccggcg tggttcgata
     1141 gccccgatcc ttcatcgtct gctgatcgac gatctcgacc gttgccgggg tttggcggac
     1201 cgtgaggccc aagaagctgc cgacttggct aaccacgttg gtgttgagag gcgtctgggc
     1261 tgcagtaccg cccgtcggtg cggtccctgg cggggcagcg gctgccggtg ttgaggttgc
     1321 ggctgccggc cctgcggaag gcttcgagac gcgccctggt aatcgcttag ggggtgctgc
     1381 aacactgatc tgcggaagat gcttttgccc atcgtctggc gccgtctggg cggcggaagg
     1441 atccgacgcg cacaacgaat aaagcgccag caagctcgat gcagaaactg aacaccacaa
     1501 aacccgccgc cgaacgccgt cactacggca tccggcttcg aatgcgaaac caaacattat
     1561 gccccccgac atttcacttc gcgaagcgcc gaagcaattt ctgtccaagc tataaatgac
     1621 gattcgcgga tgccggtagc gaaaagaaat aacaataatt catcgtctct ctgtttatat
     1681 ctaataattc aactttaaat attaccatac cccactatcc cacttgaatg ggatagggac
     1741 ccgaagtttc aacaaacatc tgccagaacg cacgaatatc tgacgggtga aacccgtccc
     1801 acatgaacta tcgccctata ctagggatct accctgatct ttgctgatct atacgtgcgg
     1861 cgaaatgtcc gccgcaggcg agtttcgcca accgatgtgg cattggcatg cccgccgatt
     1921 cgccgtcgaa ttcaccaccg gtttgtcacg gggcgtgttt tggcggtgtt catctgtgag
     1981 atcggatcga agccgatcgc agatttcatc ggatgttgaa tcggatcggc accacgaagg
     2041 atagctcgct ggtttgcact tggctcggtg gcttcggcat aggttgggcg cgagtcagca
     2101 tcgcaagcga ttcttggtcg agttccggcg atccagaggt ttggagaatc cgactctcgc
     2161 gcacctgtcc ggcacggtcg agtgtgaagg ccaccttggc caagccctgt tgtccgcggg
     2221 cgcgcgcttc ggccgggtag cgcttgaagc gctcgagatg ggcaaagagc gcgctttccc
     2281 agcggcggac gacgggatcc gcaggctgca cagccgcacc ggccacgggt ggagcaggcg
     2341 ctggcgtcat aacgatcgag ggcatcgcgg tcggcggctt ctcctcggtc ggcggttgcg
     2401 gcttgggccg ctccggctcc ggcaacgcaa cttcggccac ctcctcgggc ggcttcgttt
     2461 cctccttggg tggcggcgtg cgctcactct caggctcggt cggcccgggc gtaaggtcgc
     2521 tcggcggagt ggcgaaagcc gcgggtgcct tgggaagctc gatcatcacc accggtgcgc
     2581 cggcatcgaa atcggaatcc gaggatggat tgagcaacag cgcccacgcg gcggcaccat
     2641 gggccgcaat tgccagagca aaacagatgc cccagcgcat cgcatcatgg cgcagatttc
     2701 cgaacggcgt ggcgagcgat gtcatcgcga gtccgcctcg agcccaacca aggcgacctt
     2761 gcggtaaccg gcggcgcgca gcgcattcat ggtgtccata aggctcccat aggccacggc
     2821 cttgtcagcg cgcaaaaaga cgcgttgggt gcgatcgttg ttcgacatgg cgtcgagcgc
     2881 ggactgcaga ccagcccggg aaaccggggc gtcgcccagc gccagcgata ggtcggccct
     2941 gatggtcaaa aagatcggct ggtccgggcg cggctgcggt cgcgcattgg aggccggaag
     3001 atcgaccgca acgtcaacgg tggcgagcgg ggccgcgatc atgaagatga tcagcaggac
     3061 caggatgacg tcaatgaacg gcgtcacgtt gatgtcgtgg atgacgccga ggtcctcgcc
     3121 gtgttcgatc cggatgctca tcgcgctgct ccactcgacg gcacggcggc gagcacgggc
     3181 ttgtcgtcag cgccctggcg cggctggctc aggtcacgac tgacaagtgt cagtatctcc
     3241 acgctggcgt ctgcatagag cgcacgataa tgggcaatgg agcgcgcgaa cgcgttgtag
     3301 atcacgaccg ccgggattgc ggcggcaagg ccgaatgcgg tggcgagcag cgcttccgca
     3361 atgccgggtg caaccaccgc caggttggtg gtgtgcagtt tcgaaatgcc gatgaagctg
     3421 ttcatgatgc cccacaccgt gccgaacagg ccgatgaacg gcgccgttgc cccggtggtg
     3481 gcgagaatgc cggtcgcccg catcatctgg cgcccgaccc ccgcctcaat gcgctcgaag
     3541 cgtgccgcaa cgcgttcctt gatgccatcg gcatcgcgca ggtcgggcga ccgccgcaat
     3601 tcgctctccg ccgcccggat cagcagcgcc acatgggggc tcgcggcacg cgcctgccgg
     3661 atggcttctg cgagcgaccg cgccgcggcc aacatcttgt gtgagcgggc gaggcggcgc
     3721 cgcgcgaccg cgagttcgag cgtcttggca agccatatgg tccaggtcaa caccgaagtg
     3781 aacacgaggc cgagcatcac ggccttgacg acgatgtccg ccgacatgaa catgccccaa
     3841 ggcgtcagat cgcgcggcag ttcggctggt gttatttcgg taggtggggg caccgggagc
     3901 ggggcgcccg gcgccgagat atcatccgct gctgccggtg ctcggaccgt cgatggcgtc
     3961 gtagcagcag gcgtcggaac tgcgggagcc gcaacaggag cggccggagc ggtgatggcc
     4021 ggcggcacgg aagattgcgc cgccgcctgg ccatgccccg cgacgacgct acacgtaacc
     4081 gcgaggccaa taagcccgcc gcggaacgaa cgcgaaatta aacacacaga accggccatg
     4141 cgcaccgtca cacgctgtag atgggtatcg tccacgatca gaacggacgt ggttgggaga
     4201 cgattgtttt cccaatcaca cccgctttcg cccgccctaa aaactagcaa caaatgaccc
     4261 gtacctgtcc cgggaacatg ttccaaatct gaccgggaac ttttggcaag ttcgccgttg
     4321 aacgtcgccc atcatcggct gtcggcctct gaaacaggca gtatgactgg aacgcgcacg
     4381 tattacgtgt tacgtgcagc gttgtttttc tgaccgactt atcgggctct atcttctggc
     4441 atgcgagaag acgtagaccg aaacggcctt gatctcctcg ggtttaagcg tgccatcgaa
     4501 tgccggcatg accccacggc gtcctcgcgt aatcgactcg aggatcgacg cccggtccga
     4561 gccccacaga tacaggtctt ttcgcgttag attcgttgac ccgatgggat cgcttcctgt
     4621 gccatcggtg ccgtggcaat caaagcaatt gccctttgcg ccgtcgagga agaggacctt
     4681 gccgcgggcg gcgcgggcgg tatctgcctg ttgaccgcta atttggagga catattcaac
     4741 cacatccttg atctcctcgg gggttagaaa tgcctcgctg ccgaactcct ttatgtcctc
     4801 ttcggtgcga tactgcggat cgtaagccag catatcggct tccaaccccc gtgcattcgg
     4861 gttgtctgag cggatgccgt aacgaacggt ccattcgaca tcggagggga acttgacgtt
     4921 gccgcccgac gccaggtcgt cgccggaaaa tcgccaatcg gcgtcggtca gatcaggtgt
     4981 atgctcatcc ggaattccct tgaggtcggc gccgtgacac atggcgcaat gcttggcata
     5041 gaccttcttg cccagcgaca tcgcccctcc ggttagacgg agagatctgg cgatgtcgtt
     5101 gaccgcaagg gacgccaact cctcaggcct ggcaaggaac tcgccgtatt cttcttccgg
     5161 ctccagcgaa ggcacttgcg cggctgcagc tacgccaatt cccaatacga tcaacgttac
     5221 cgaggtcagg ctacatgttg gattgaccaa ccgcgacagg agcgaacggt atgctatgta
     5281 tcgtccgctg ccaaccattc gcttcctccc gtcgcgtttc gcgtgatcac aacaccgagg
     5341 gccgtgagtt tttcttagct atttttagtt ggcccgctct atttcggcaa gcgccgctgc
     5401 tccgctaatg tggcatggaa gcttcccatt ttgtacacgt ttcgcgcgag acctctccat
     5461 ttgtccgccc acctggctgc cccggcgagg caatagataa ttacgctata tggtatagat
     5521 acctatatct cttcattcaa agtattttct cgctcaatcc gtcagattga agaatggata
     5581 ctgcttcggc gggtcgagat cattgcggtt ccaccagccg cctcctagtg cctggaacag
     5641 cgctacggtg tcggcgaaac gattagcctg cgcctggacg cgcgcaagca gcgcctgcaa
     5701 atagaactgc tgcgccacga gcacttggag gaagttgact tcaccgagtt ccaggcgccg
     5761 gcgggtgatg acaagaaccc ggttcgcggc ggtttcggcg gcgacggact tttgcaacgc
     5821 caccgcatcg ttctggatgg cgctcaagct gtcggcgacg ttctggaacg ctgtgacgag
     5881 tgtggaacga tattgcgcgg tcgcctgctc gaacgcggcg cgtgccgcga cctcgcgctg
     5941 gtacagcgtg ccaccgtgaa agatgggttg aagcagggag cccgttatgg cccaggcccc
     6001 tgtgcccgga gagaacagct gatcgatcat tggcgccgtg ctgccgacat tgccggtgag
     6061 cgtcacgttt ggaagccggt ttgcaaccgc gacgccgatc tgtgcgctca ccgcgtgcag
     6121 gttctcctcc gcggcgcgaa ggtcgggacg ttgctggacg aggtgcgagg gcacgctgac
     6181 cgggatgtcg cggggtagat gcagcgcagc gagctcgaat ttttccggtg gctcctcgct
     6241 cgggagaccc ccggtgagcg ccgagagcag gtggcgttgc tgcgctaatt gccgctggag
     6301 tggcgggagc gtctgctcga cctgagccaa cgcagcctgc tgtgttgcca catccgattc
     6361 tgctatctgc ccggcgttga attgcgtccg cagcagctgc aatacgttgg tggcgatctt
     6421 aatgagcgat tgggtggcgt cgatctgtcc acgcaatgac gcttcctgca ctgccgcgac
     6481 cacaatattg gaggtcaacg tcaggtaggt cgcctcgagc agaaaacgtt ggttgtccga
     6541 ctgggcctca agcgactcga cattgcgtcg aatcccgccg aagacgtcag gcgtatagga
     6601 aaccagcacc tgaccggtaa agagattgaa ggtcgc
//
LOCUS       DATILV010000422         1978 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3421002, whole genome shotgun sequence.
ACCESSION   DATILV010000422 DATILV010000000
VERSION     DATILV010000422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1978)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1978)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1978
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3421002"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..1164)
                     /locus_tag="VLJ17_09595"
     CDS             complement(139..1164)
                     /locus_tag="VLJ17_09595"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV23270.1"
                     /translation="MCTASAIALAAISGRAAAQTPRANGETVGIQNYASTTGNMHAII
                     AKEKGFCDKYNFKCEIKILNSTSLGLQALVGKSIDFTHSGADLVGAAVVAGAEVVIVG
                     TSLPANVLSISVRTDVSMPSRDKGYPAIMNDFKGKRIGVAARGSSNEKYFNAMLKDAG
                     LKPEDVTYVAVGAPSTTYTALAIGKQIDAAIMYQPLTQLCQFNKTCETVIDMTIGEGP
                     KSLEATIGANIVFAARKEMVESNPKLMEAFYAAMTDAAAWLHDPKNFEELVKIYTPMI
                     SFGDMAGADEMRRNWIKSVIPAYSKDLKVKVSALQEIMDFSLENKIIDVKVEAKRVLW
                     EKAPQTP"
     gene            complement(1232..>1978)
                     /locus_tag="VLJ17_09600"
     CDS             complement(1232..>1978)
                     /locus_tag="VLJ17_09600"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSV23271.1"
                     /translation="LGRAVKVADQTIAFGSGSRGLRIRKPPRLLNRTTSELHGSAGTR
                     HVAFDTDDLNGIASRLDRAAIPYVHALPGDFDASAIYTIDPAMNVVAFCQRSTGGPTD
                     QPVQSLVHDWGWGIHHVNLEACDVREAAAFYVEIAGMTEGLWQAPAAAGDVVVDPSMV
                     SLLSLGDFNRGIHIVRADPGFPTRYSLEHNPTIGGHPAFSVRDVHAVKARLERDRVLV
                     SDAKVYAMDRMYQIYLQDPSANMLEVNQFV"
BASE COUNT          354 a          590 c          577 g          457 t
ORIGIN      
        1 tggtggcttc gaacaccacc gacaccttgt cgaagacgat cgagcccggc gcagggtttg
       61 ctacggtacc ggcgcgggct ttcgtctgcg ccgctttcat ggctatgttc attgtttgct
      121 ctttcacttt agcccgcatc aaggcgtctg tggcgccttt tcccacagca cccgcttggc
      181 ctcgaccttc acgtcgatga tcttgttctc gaggctgaag tccatgatct cctgcagcgc
      241 cgagaccttg accttcaggt ccttgctgta ggcgggaatc acgctcttga tccagttcct
      301 gcgcatctcg tcggcgcccg ccatatcgcc gaacgagatc atcggcgtgt agattttgac
      361 gagctcctcg aaattcttcg gatcgtggag ccaggcggcc gcgtccgtca tcgccgcgta
      421 gaacgcttcc atcagcttcg ggttactctc caccatttcc ttgcgcgcag cgaaaacaat
      481 gttggcgcca atcgtcgctt ccagcgactt cggaccttcg ccgattgtca tgtcgatcac
      541 cgtctcgcag gtcttattaa attgacagag ctgggtcagc ggctggtaca tgatcgccgc
      601 atcgatctgc ttgccgatgg cgagcgcggt gtaggtggtg ctcggtgcgc ccactgcaac
      661 atacgtcaca tcttccggct tcaggccggc gtccttgagc atggcgttga aatacttctc
      721 gttcgagctt ccgcgcgcgg cgacgccgat ccgcttgccc ttgaagtcgt tcatgatcgc
      781 cggatagccc ttgtcgcggc tgggcatcga cacgtcagtg cggacgctga tcgacagcac
      841 gttcgccggc aggctggtgc cgacaatgac gacctcagcg cccgcgacca ccgctgcgcc
      901 gacgagatcc gcgccgctat gcgtgaagtc gatgctcttg ccgaccagcg cctgcaggcc
      961 gagcgaggtc gaattgagta tcttgatctc gcacttgaaa ttgtacttgt cgcagaagcc
     1021 tttctccttg gcgatgatcg catgcatgtt gccggtcgtg ctggcgtagt tctggatgcc
     1081 gaccgtttcg ccgttggcgc gcggcgtttg tgccgcagcg cggcctgaga tggcggcaag
     1141 tgcgatggcc gaggcggtgc acaaattgaa tgtgaatgac cgacttttca ttccttacct
     1201 cccgatgcgt tgttataact gcctgcttca atcagacgaa ctggttcacc tcgagcatgt
     1261 tcgcagaggg atcctggaga tagatctgat acatcctgtc catcgcatac actttggcat
     1321 cagatacgag aacgcggtcc cgttccaggc gggcctttac ggcatgcaca tcgcgcaccg
     1381 agaatgccgg gtgtccgccg attgtcgggt tgtgctcaag gctgtatcgg gttgggaagc
     1441 ctgggtcggc gcgaacgatg tgtatgccgc ggttgaagtc gccaagggac aaaagcgaaa
     1501 ccatcgacgg atctacgacg acgtcaccag cagcagccgg agcttgccag aggccttcgg
     1561 tcataccggc gatttcgaca tagaatgcgg ctgcttctcg cacgtcgcag gcctctagat
     1621 tgacgtgatg gattccccag ccccagtcgt gcaccaaaga ctgaacgggt tggtctgttg
     1681 gaccgcccgt cgatctctga cagaaggcca cgacattcat tgccgggtcg atcgtgtaaa
     1741 tggcggatgc gtcaaagtcg ccgggcaagg cgtgcacgta aggtatcgcc gctctgtcca
     1801 gtctgctcgc gattccattc aggtcgtcag tgtcgaaagc gacatggcga gtgcctgccg
     1861 atccgtgcaa ttccgacgta gttcggttga gcagcctcgg cggctttctg attcgcaagc
     1921 ctcgactgcc gctgccgaaa gcgatcgtct gatcggcgac tttaacggct cggcctag
//
LOCUS       DATILV010000423         6708 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_870050, whole genome shotgun sequence.
ACCESSION   DATILV010000423 DATILV010000000
VERSION     DATILV010000423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6708)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6708)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6708
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_870050"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..561
                     /locus_tag="VLJ17_09605"
     CDS             <1..561
                     /locus_tag="VLJ17_09605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23272.1"
                     /translation="DIYRLDLATSKWERFQPLNDLAARPASIYQVISDSQNNLWMAEF
                     QRGHIGKIDAKTSKVTWHVLPTANARARRMVIDDQDRILVTEYRGNKVAMFDTRTEKV
                     TEWPLPAYTYPYRATVDKNGEIWTGGMHTDRAVRLDPKTGDTVEYQLPKETNMRTVFV
                     DNSTTPVTFWTGSNHGAALVKVEPLD"
     gene            647..1480
                     /locus_tag="VLJ17_09610"
     CDS             647..1480
                     /locus_tag="VLJ17_09610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008836513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HSV23273.1"
                     /translation="MPTRRFLLTAVLAATTGFGGAAFAQDKSIVVASTTSTQDSGLFG
                     YLLPLFKAKTGIDVKVVAQGTGQALDTARRGDADVVFVHAKAAEEKFLAEGFGVKRFP
                     VMYNDFILIGPARDPGGIRGMSDIVAALKAIRDKRAPFVSRGDRSGTHQAELALWATA
                     GIDIARDKGAWYREIGQGMGAALNTAGAMEAYTISDRGTWISFRNRGDLIVAVEGDQR
                     LFNQYGVMLVNPAKHPGVKTELGQQFISWLVAPEGQRAIANYQIDGQQLFFPNAGTPG
                     A"
     gene            complement(1548..2330)
                     /gene="pcaD"
                     /locus_tag="VLJ17_09615"
     CDS             complement(1548..2330)
                     /gene="pcaD"
                     /locus_tag="VLJ17_09615"
                     /EC_number="3.1.1.24"
                     /inference="COORDINATES: protein motif:HMM:TIGR02427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047570 - 3-oxoadipate enol-lactonase
                     activity [Evidence IEA];
                     GO_process: GO:0042952 - beta-ketoadipate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoadipate enol-lactonase"
                     /protein_id="HSV23274.1"
                     /translation="MRIKANGITFNYTIEGPAGAPWLVFSNSLATNLSMWEPQAADLS
                     RSFRVLRYDQRGHGGTDAPAGRYTYATLVVDALALFDALDIKRPHFCGLSMGGATALG
                     LAELHPDRVDHVVVCDSPAMSTPATAQQWEERIAAAQNGGMQSLVESTMARWFPPETH
                     AAKPPHLEKLRQMILTTPVNGFIGCAAALADHDYNTAVATVTRPVLFIAGSKDGVTPA
                     AMKDMSARLKGSRYVELEGAGHISNLDRPAEFTKAVRKFLEA"
     gene            complement(2461..4272)
                     /locus_tag="VLJ17_09620"
     CDS             complement(2461..4272)
                     /locus_tag="VLJ17_09620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009337039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV23275.1"
                     /translation="MLTRFWRALFADPHGSPALIRRLMVEHGSSHWSRYLLSFAMMAV
                     GAACTAAMAFIIGPGIDQAYTERSFEGVAMVGVALIALFVIKGFATYGQAVTLARVGN
                     QIIAANQRRMFDKLLAQDAGFYADRHSSEFAARITFGAGSAAQVLSLVITTLGRDLLS
                     LIGLVGVMVWKAPLMAILALMVMPPAVVTVRKLMKRVRAITLTQFGGGADILKTMQET
                     IQGFKIIKAFNLETVVRAQVYESIASVERASNKLARVSNRSTPLMEALGGCAIAAVFI
                     YGGYRVLVLNLAPGELFSFITAFLLAYEPAKRIARLNIDLHNALTGVQVLFDVLDIPD
                     HRPMQPKPNIAVKRGCIEFDHVSFAYRTGSPVLRQLSFTAQPGEVTAFVGPSGGGKST
                     IFNLVLALYAPDGGTIRIDGQDYGAVSEESIRRQISFVGQDVFLFHGSIRHNIGLGRP
                     GASEAEIVAAAQAAHADEFISQFAAGYDTMVGEHGAQLSGGQRQRIAIARALIRDAPI
                     ILLDEPTAALDSESERFVQDAMGKLIRGRTTLVIAHRLHTIAQADMIHVVERGTIAES
                     GRHAELLARGGRYAHFYRMRFSRDAAEGMDEVSIVPG"
     gene            4805..5305
                     /locus_tag="VLJ17_09625"
     CDS             4805..5305
                     /locus_tag="VLJ17_09625"
                     /inference="COORDINATES: protein motif:HMM:NF023010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3237 domain-containing protein"
                     /protein_id="HSV23276.1"
                     /translation="MTTRSLSELLPKEMTQLAVRPLFILLLEVQPAINVGNTPGVDRR
                     VGVIIGGRFAGERLRGTVLPGGSDWQAIRPGDGAWMLDVRIVLKTDDEQIIGMPYRGM
                     RHGPKEVLDRIARGEVVKATDYYLRIAPFFETASPKYSWLNNIISVGIGHRLPEGPVY
                     QVFEVL"
     gene            5489..5863
                     /locus_tag="VLJ17_09630"
     CDS             5489..5863
                     /locus_tag="VLJ17_09630"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HSV23277.1"
                     /translation="MSDILQNFDLTDGFNILRLICGLFFIPHIYAKFFVPEALGFFVA
                     AKFKPPAVWMYTACVIETVLAIGLIFGIYITYVGLIAFVYLLVAAAAVWKVTGGKWLW
                     NIGGYEYCVFWAISCLVVAMSA"
     gene            complement(5955..>6708)
                     /locus_tag="VLJ17_09635"
     CDS             complement(5955..>6708)
                     /locus_tag="VLJ17_09635"
                     /inference="COORDINATES: protein motif:HMM:NF017206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NmrA family NAD(P)-binding protein"
                     /protein_id="HSV23278.1"
                     /translation="EVLGDVRTAVAELTDRDALERALQGVTRVFVVTGHNPQMAEQQN
                     NILDAALKVGAEHLVRVSGGRAVVGPDAESVVGRGHHAVEERLRKSGIGWVILRPGLF
                     MQNAFAQAALIKNDSKIVLPFAKDLPIAFIDVRDTGAVGARILIDPAPHAGKTYEFTG
                     ALTNYGEFAGVFSQVLGRTITYVEATLEQAEQGLKARGLPDWLVAHQLAIAKLAAKGA
                     FSTENAQPIHDIVKRAPLTTRQFVEDHRSLFG"
BASE COUNT         1262 a         2037 c         2133 g         1276 t
ORIGIN      
        1 gacatctatc ggctcgatct cgcgaccagc aaatgggaac gcttccagcc gctcaatgac
       61 ctcgccgccc ggccggcctc gatctaccag gtgatctccg attcgcagaa caatctctgg
      121 atggccgagt tccagcgcgg ccatatcggc aagatcgacg ccaagaccag caaggtcaca
      181 tggcatgtcc tgccgaccgc gaatgcacgg gcgcggcgga tggtgatcga tgatcaggac
      241 cgcatcctgg tcaccgaata tcgcggcaac aaggtcgcaa tgttcgacac caggaccgaa
      301 aaggtgacgg aatggccgct gcctgcgtac acctatccgt accgtgcgac cgtcgacaag
      361 aacggcgaaa tatggaccgg tgggatgcac accgatcgcg ccgtgcggct tgatcccaag
      421 accggcgaca cggtcgagta tcagctgccg aaggagacca acatgcgcac cgtgttcgtc
      481 gacaattcga cgaccccggt caccttctgg actggcagca accacggcgc cgccctcgtc
      541 aaggtggagc cgctcgatta gtagaacgag tatgctgcgc gtccgtcccg tcaatccgat
      601 gggacgggcg cgttgctttt tttgatttga tcgaggagga gccgccatgc cgacccgccg
      661 tttcctgctt accgcggtcc ttgcggcgac gaccggattt ggcggcgccg cgttcgccca
      721 ggacaagtcc atcgtggtcg cctcgacgac gtcgacgcag gattccggcc tgttcgggta
      781 tctgctgccg ctcttcaaag ccaagacggg catcgacgtg aaggtggtgg cccaaggcac
      841 cggccaggcg ctcgacaccg cgcggcgtgg cgatgccgac gtggtgttcg tgcatgccaa
      901 ggcggcggag gagaaattct tggccgaggg cttcggggtg aagcggttcc cggtgatgta
      961 taatgacttc atcttgatcg gtccggcgcg cgatcccggc ggcatcagag gcatgagcga
     1021 tatcgtcgcg gcactcaagg cgatccggga caagcgggca ccgttcgtgt cgcgcggcga
     1081 tcgctcgggc acccaccagg ccgagcttgc cctgtgggcg acggccggca tcgacatcgc
     1141 tcgggacaag ggcgcatggt atcgcgagat cggccagggc atgggcgcgg cgcttaacac
     1201 cgcgggcgcc atggaggcct atacgatctc cgatcgcggc acgtggatat cgttccggaa
     1261 cagaggcgac ctcatcgtcg cggtggaggg ggaccagcgg ctattcaacc agtacggcgt
     1321 catgctggtc aacccggcaa agcatcccgg cgtcaaaacg gaactcggtc agcaattcat
     1381 ctcgtggctg gttgcgcccg aagggcagcg ggcgatcgcg aattaccaga tcgacgggca
     1441 gcagctgttt tttccgaacg caggcacgcc aggggcgtga agctggtagt ttgcggatat
     1501 gtcgctgcgc tccatccagg ctatgggctg atcagaaatt gcactcctca cgcctctaaa
     1561 aacttccgca ccgcctttgt gaactccgcc ggccggtcga gattggagat gtggccggcg
     1621 ccttcgagct cgacataacg tgagcctttg agccgcgcac tcatgtcctt catggcggcc
     1681 ggtgtgacgc cgtctttcga tcctgcaatg aacagcacgg gccgcgtcac ggtggcgacc
     1741 gcggtgttgt aatcatgatc cgcgagcgcc gccgcacagc cgataaagcc gttgacgggc
     1801 gtggtaagga tcatttggcg cagcttttcc aggtgcggtg gcttggccgc atgggtttcg
     1861 ggcgggaacc agcgcgccat ggtcgactcg acaagcgact gcatgccacc gttctgagcg
     1921 gccgcgatgc gctcctccca ttgctgcgcc gtcgcggggg tggacatggc gggcgagtcg
     1981 cacaccacga cgtgatcgac ccggtcagga tgaagttccg ccagcccgag cgcagtggcg
     2041 ccgcccatgg acagcccgca gaaatggggg cgcttgatgt cgagtgcgtc gaacagtgcc
     2101 agcgcgtcca ccaccaacgt cgcgtaggtg tagcggcccg cgggcgcgtc ggtaccgccg
     2161 tggccgcgct ggtcatagcg caacacgcga aacgaacggc tgagatcagc cgcctgcggc
     2221 tcccacatgg aaaggttggt ggcgagggag ttgctgaaaa cgagccaagg cgcgcccgct
     2281 gggccctcga tcgtgtaatt gaaggtgatg ccgtttgcct tgatccgcat ggtgtttccc
     2341 tcgcgttgca tccggatgga ccttctcctc cccatccaat cgaattcgac tgttgtcgaa
     2401 ttcgattgga tggggaggga ttacatgcgg gccacgcttt gcgcttgtgt tgcgcccgcg
     2461 tcatcccggc acgatcgaaa cctcgtccat gccctcggcg gcatcccgcg agaaacgcat
     2521 ccggtagaaa tgcgcgtacc ggcctccgcg tgcgagaagt tcggcatggc ggccggattc
     2581 cgcgatcgtg cccctttcga ccacgtggat catatcggcc tgggcgatgg tgtgcagccg
     2641 gtgggcgatg accagggtgg tgcggccccg gatcagcttg cccatggcgt cctggacgaa
     2701 acgctcggat tcgctgtcga gcgctgcggt cggctcgtcc aacaggatga tcggggcatc
     2761 gcggatcagc gcccgggcga tggcgatgcg ctggcgctgg ccgccggaca gctgcgcgcc
     2821 gtgctctccc accatggtat cgtatccggc ggcgaattgc gaaatgaatt cgtccgcgtg
     2881 cgccgcctgc gcggccgcaa cgatctcggc ctcgctcgcg cccggtcggc ccaagccgat
     2941 attgtggcgg atggagccgt gaaaaagaaa cacgtcctgt cccacaaagg agatctgacg
     3001 ccttatcgat tcctcggaga ctgcgccgta atcctgcccg tcgatacgaa tggtgccgcc
     3061 gtccggcgca tagagcgcca gtaccagatt gaagatcgtc gacttgccgc cgcccgacgg
     3121 cccgacgaaa gccgtcacct cgccgggctg ggccgtgaac gaaagctgcc gtagcactgg
     3181 gctgccggtc cggtaggcga acgacacatg gtcaaattcg atgcagccgc gcttcaccgc
     3241 gatgttgggc ttcggttgca tcggccggtg gtccggaatg tcgagcacgt cgaacagcac
     3301 ctgcacgccg gtaagcgcat tgtgcagatc gatgttgagc cgcgcgatgc gcttggccgg
     3361 ttcgtaggcg agcaggaacg ccgtgatgaa ggaaaacaac tcgcccggcg ctaagttgag
     3421 caccaggacg cggtagccgc cgtaaatgaa cacagccgcg atcgcgcagc cgccgagtgc
     3481 ttccatcaag ggggtcgagc ggttggagac ccgggcgagc ttgttggagg cgcgttccac
     3541 cgacgcgatg ctctcataga cctgggcgcg cacgaccgtt tcgagattga aggccttgat
     3601 gatcttaaat ccttggatgg tctcctgcat ggtcttgagg atgtcggcgc cgccaccgaa
     3661 ttgcgtcagc gtgatagcgc gcacgcgttt catcagcttg cgtaccgtga cgaccgctgg
     3721 gggcatcacc atcaaggcca ggatggccat cagtggcgcc ttccacacca taacgccgac
     3781 cagcccgatg agcgacaaga gatcacgtcc aagcgtcgtg atgaccaggc tcaagacctg
     3841 cgcggccgaa ccggccccga aggtgattcg ggccgcgaac tcggaagaat ggcggtcggc
     3901 gtaaaagcca gcgtcttgcg ccagcagctt gtcgaacatg cgtcgctggt ttgcggcgat
     3961 gatctggttg ccgacgcgcg ccagcgtcac cgcctgtccg taggtcgcaa accccttgat
     4021 gacgaacagc gcgatcaggg ccacgcccac catagcaacg ccctcgaagc tgcgctccgt
     4081 ataggcttga tcgatgcccg ggccgatgat gaaggccatg gcggccgtgc acgcggcacc
     4141 gaccgccatc atggcgaacg acaacaaata gcgcgaccaa tggctactgc catgctcgac
     4201 catcaggcgg cgaattaagg ccggcgagcc gtgcgggtcg gcaaacagcg cgcgccagaa
     4261 acgtgtcaac atcgataccg attcaatcaa ggcgcccctg caccatcgaa gtaccgctgt
     4321 accggaccgg cgtgacgttg tccacgcggc agcggattcc ttgagagcag ggaaatcagc
     4381 agggaatttt cggaatttcc gcccgattcc tgcatcttgg ggcggttttg cgagccggtc
     4441 gccaagcgga ttcaatagct tgcagccctt cccccgctct tcgtggacca gggaatcttt
     4501 cttgccggag cagggaattc gtccgaccga gcagggaatc ttcaaggtgg agccgcggtg
     4561 tggccggctg cgtcgtgcca aggcacatcg gggcaacacc cgtccctgat tgggaaaccg
     4621 aaatgatcga aattcggcga tcgatgaggt tgcaaaattt ccatcatgtc gaagcgcaac
     4681 gttctgatga cagttgttcc tttccatgtc atgcccagca aatgcggtgc gccacccacc
     4741 aagttgtccg ggtgtgagct tttgatagaa acaccgaagc gtctcaagac aggaggtcgg
     4801 ccccgtgacc acacgttcgc tttctgaact tctccccaaa gaaatgaccc agctggccgt
     4861 ccgtccgcta ttcattctgc tgcttgaggt gcagcccgcg atcaatgtcg gaaatacacc
     4921 gggcgtcgat cggcgcgtcg gcgtcatcat cggcggccgg ttcgcgggcg agcggttgcg
     4981 cggcacggtg ctgccaggag gcagcgactg gcaggcgatc cggcctggcg atggcgcctg
     5041 gatgctcgac gtgcgcatcg tgctgaaaac agacgacgaa cagatcatcg gcatgcccta
     5101 tcgcggcatg cgtcatggtc ccaaggaggt gctcgaccgc attgcccgcg gcgaggtagt
     5161 aaaggcaacg gattactatc tgcgcattgc accgttcttc gagacggcgt cgccgaagta
     5221 cagttggctc aataatatca tcagcgtcgg gatcgggcat cggttgcccg aggggccggt
     5281 ctatcaggtg ttcgaggtgc tctgaccatt ttgcgcgcag tgcggggtgg gcaaaggcgc
     5341 gctcttcgcg ccgtgcccat tgggctcggc aatggtgggc acgcttcgct ttgcccaccc
     5401 taccgatgct cccttacgtg agcatcgaat ggaattctca caaagggcag gttaacctac
     5461 tcgacaaaga gaccgtggag gggggagcat gtccgacatt ctgcaaaact tcgatctcac
     5521 cgacggattc aatatcctgc ggctgatatg cgggctgttt ttcattccgc atatctatgc
     5581 caaatttttc gttccagagg cgctgggatt ctttgtcgcc gcgaagttca agccgccagc
     5641 ggtctggatg tacaccgctt gtgtcatcga aacagtgctc gcgatcggat tgattttcgg
     5701 gatctacatc acgtatgtcg gcctgattgc ctttgtttat ctgctggtcg ccgccgctgc
     5761 ggtctggaaa gtcacggggg gcaagtggct gtggaacatc ggcggctacg aatattgtgt
     5821 gttctgggcg atcagctgcc ttgttgttgc aatgagtgcg tgatcggcaa ctccggctgc
     5881 aatcgcggtt gcatcgattg acgcgggcca cgctgttgac gacgtgaggg gggacagcgg
     5941 cagcgagccg ctctttagcc gaataggctc ctgtggtctt cgacaaactg cctggtggtg
     6001 agcggcgcac gcttgacgat gtcgtggatc ggttgggcgt tctcggtgga gaacgcaccc
     6061 ttcgcggcga gcttcgcgat tgcgagctgg tgagccacga gccagtccgg caggccgcgc
     6121 gccttcagcc cctgctcggc ctgctcaagc gtcgcctcga cataggtgat cgttcggccc
     6181 aggacctgcg agaatacgcc ggcgaattcg ccgtaattgg tcagtgcccc ggtgaattca
     6241 taggtcttac cggcatgcgg ggccggatcg atgaggatgc gcgcgccgac ggcgccggta
     6301 tcgcgcacat cgatgaacgc aattggtagg tccttggcga acggcagcac tattttgctg
     6361 tcgttcttga tcagtgcagc ctgcgcaaac gcattctgca tgaacaggcc gggacgcagg
     6421 atcacccagc cgatgccgct cttgcgcagc ctttcctcaa ccgcatggtg accgcggccg
     6481 acaactgatt ccgcatccgg gccgaccacc gcccgcccgc cagagacgcg gaccagatgc
     6541 tcggccccca ccttgagagc cgcatcgagg atattgttct gctgttcggc catctgtggg
     6601 ttgtggccgg tcacaacgaa cacgcgtgtc actccttgca gcgccctttc gagcgcgtcg
     6661 cggtcggtca gctcggcgac agcagtcctt acatcgccca ggacctcg
//
LOCUS       DATILV010000424         2558 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2145581, whole genome shotgun sequence.
ACCESSION   DATILV010000424 DATILV010000000
VERSION     DATILV010000424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2558
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2145581"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..552
                     /locus_tag="VLJ17_09640"
     CDS             <1..552
                     /locus_tag="VLJ17_09640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23279.1"
                     /translation="EFFGMRPWRAVWAAVPGAKAIRYTFRSQLVANLFVALITARILA
                     GIARARFLTLFLCTFLVVEQFNLAWPAVMSRRATLAWIDAVPPPPHGCSVFYVIPHAG
                     PPDRNGPQHQDDAVLFAEIRGIPTINGYSSWFPDGWALEEPASLTYAAAVRTWAGRNG
                     IAPKLCGLEPRAGRWTPGLPDNE"
     gene            772..1032
                     /locus_tag="VLJ17_09645"
     CDS             772..1032
                     /locus_tag="VLJ17_09645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23280.1"
                     /translation="MNRLLIAMLLAANPIVILSNFGQARSDHMAPTSVNSVVERHDTD
                     DRQSRQEDRRRNRGPDDDKRDDGKDRGRDRDRDRDRGHDDRL"
     gene            complement(1050..>2558)
                     /locus_tag="VLJ17_09650"
     CDS             complement(1050..>2558)
                     /locus_tag="VLJ17_09650"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcineurin-like phosphoesterase family protein"
                     /protein_id="HSV23281.1"
                     /translation="ADVLVSNGRDVVRTDSEGRYTLPVGDEAIIFVVKPTGYSVPVDH
                     DAKLPRFYYIHQPRGTPAHLGLYDRGIPPTGQLPGSIDFALKKKPEPTRFDVILFTDP
                     HADGAAAIDYIRTDVVNALVGTKAAFGMTLGDLMSDDLSFYSRYNRVIGRIGIPWYNI
                     SGNHDLNFEARDRKYSRETFRRIFGPDYYAFEYGGALFLMLDNVDYLGNGRYQGRFGE
                     RQLAFVADVLRETPADRLVVVAMHIPLRTYLDPDDPTINTSDGVELLKILGDRPAVSF
                     SGHTHTTEHHYLNNGSSNVLAHHHHVLTALSGSWWSGPYDHRGVAVADSPDGNPNGFH
                     VLSVDGNRYTAQFCPAKESGTRQVRVVLESEARKRTTTDNDVGLGPLFGSPIPQNIVC
                     MTDVIVNVFDGGPRSTVEYRIDGFETVRMKPTRRRDPFVQEVFAANQATKKPWAQAEL
                     CSHVWAARLPADLEAGTHCIMVRVVDEYGREHHDCLCLEVISTPAPQALVRG"
BASE COUNT          543 a          723 c          738 g          554 t
ORIGIN      
        1 gaatttttcg gcatgcgacc gtggcgagcc gtatgggcgg cagtgcccgg cgccaaggca
       61 attcgctaca cgtttcgctc gcagctcgtg gcaaacttgt tcgtggcgct tattacggcc
      121 cgcatattgg ccggaattgc acgtgcccgt tttttgacct tgttcttatg caccttcctg
      181 gttgttgagc aattcaatct ggcttggccc gccgtcatgt cgcgccgggc cacgcttgcc
      241 tggatcgacg cagtaccacc gccgccgcac ggctgcagcg ttttctatgt gataccgcac
      301 gcgggtccgc cagaccgcaa cgggccgcag caccaggatg acgccgtatt gttcgctgaa
      361 attcgtggca ttccaaccat taacggctat tcgagctggt ttccagacgg ctgggcgctc
      421 gaggaacccg cgagcttgac ctatgcggcc gctgttcgga cttgggccgg tcgcaacggc
      481 attgcgccaa agttgtgcgg gctagagccg cgcgcgggtc gatggacgcc cggtctcccg
      541 gacaacgaat aatgtcgttc cacttcggca gatgaacctc cttggctgat cgcattgcca
      601 cgcgattaaa cagtacgggt cggcctcagc ggcagaaatg tcattttgcc gatccggact
      661 gtcagcttga tgttaggcat ctactgatag gaatcgtgtt gcgaaggcct cggatcaatc
      721 gtgttgcgaa ggcctcggat cacttggggg tcacttgggg agcgatccaa aatgaacagg
      781 ctgctgattg caatgctgct cgccgccaat ccgatcgtca tcttatcgaa ctttggccaa
      841 gcgcggtccg accatatggc tccgacatcc gtcaactcgg tcgtggagcg ccacgacacc
      901 gatgatcgcc agtcgcgtca ggaggatcgt cggcgtaacc gaggacctga cgatgacaaa
      961 cgtgatgatg ggaaagatcg cggcagagat cgcgacagag atcgcgacag aggacatgac
     1021 gatcgcctgt gaatcgcctg acggacgaat caaccgcgca caagtgcctg tggcgccggc
     1081 gtactgatca cttccaggca aagacaatca tgatgttcgc gaccatattc atcaaccacg
     1141 cgaaccatga tgcagtgagt cccggcttcc agatcggcag gaagccgagc ggcccaaaca
     1201 tgtgagcaca gttccgcttg agcccagggc ttcttggtcg cttggtttgc ggcaaacact
     1261 tcttggacaa atggatcccg ccgtcttgta ggtttcatcc taacggtttc aaatccgtca
     1321 atccgatact cgacggtgga gcgaggtccg ccatcgaaaa cgttgacgat cacgtcggtc
     1381 atgcaaacta tgttctgagg aataggcgag ccaaaaagcg ggcctaaccc gacatcattg
     1441 tcagttgtcg ttcgtttccg tgcttcgctt tcgagtacaa cgcgtacttg ccgtgtcccc
     1501 gattccttcg cgggacaaaa ctgcgccgtg tagcgattgc cgtcgacgct taagacgtga
     1561 aatccattgg ggtttccatc ggggctgtcc gcgaccgcaa caccgcggtg atcataagga
     1621 ccactccacc aggacccgga cagcgccgtc aacacgtgat ggtgatgggc gaggacgttg
     1681 ctgctcccgt tattgagata atggtgctcg gtggtgtgcg tgtggcccga aaagctcacg
     1741 gctgggcgat cgccgagaat tttgagtagc tccacaccgt ctgacgtgtt gatagtggga
     1801 tcgtccggat cgagataagt tcgcagtgga atatgcattg cgacgacaac gagccgatcc
     1861 gcgggcgttt ccctgagcac gtcggcaaca aaggcaagtt gtcgttcgcc gaagcgccct
     1921 tggtatctgc cattgcccag atagtcgacg ttgtcgagca tcagaaatag cgcgccgccg
     1981 tattcgaacg catagtaatc cgggccaaaa atccgccgga aggtctcgcg cgaatatttt
     2041 cgatcgcgcg cctcgaagtt cagatcatga ttgccggaaa tattatacca cggtatgccg
     2101 atccgtccga tgacgcgatt ataccgcgag tagaacgata ggtcatcgga catgagatcg
     2161 ccaagcgtca tgccaaacgc ggccttggtt cccaccagtg cgttcaccac atcggtgcgg
     2221 atgtagtcga ttgcggcagc accgtccgca tggggatcgg taaacaaaat gacatcgaaa
     2281 cgggtcggct cgggtttttt tttcaacgcg aaatcaattg agcccggcag ttgaccggtt
     2341 ggcgggatgc cgcgatcgta cagccccaaa tgcgcgggcg ttccccgtgg ctgatgaatg
     2401 taataaaagc gaggcaactt ggcgtcgtga tcgactggta cgctgtatcc agtcggcttg
     2461 accacaaata tgatcgcctc gtcacctacc ggcaacgtgt atcggccctc gctgtcggtt
     2521 ctcaccacgt cgcgaccgtt agataccagc acgtcggc
//
LOCUS       DATILV010000425         2296 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2657420, whole genome shotgun sequence.
ACCESSION   DATILV010000425 DATILV010000000
VERSION     DATILV010000425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2296
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2657420"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            19..579
                     /locus_tag="VLJ17_09655"
     CDS             19..579
                     /locus_tag="VLJ17_09655"
                     /inference="COORDINATES: protein motif:HMM:NF013791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0070069 - cytochrome complex [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0019646 - aerobic electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HSV23282.1"
                     /translation="MAGVAVIGQPNVATRRLENPIEVPGALSFLAYGTFQSYVHGLEE
                     YPEDAWPDNIELLYYSFHLMITLGTMFVILMAYASFQNWRGRLESSTWLLWVLMLAFP
                     FPYIANTLGWMTAELGRQPWLVYGLFRTRDGVSKVVSHGDTIFTLIGFIGLYFVLGLL
                     FLYLVGREIGHGPDEVIAGRGEEPAL"
     gene            576..1625
                     /gene="cydB"
                     /locus_tag="VLJ17_09660"
     CDS             576..1625
                     /gene="cydB"
                     /locus_tag="VLJ17_09660"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014386.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016682 - oxidoreductase activity, acting
                     on diphenols and related substances as donors, oxygen as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HSV23283.1"
                     /translation="MIATWYGIVSFMLIVYVALDGRNFGAGMLHWLVARTPEERRQVI
                     AAIGPLWSWHEVWLVGFGGTLVAVFPRLMASAFAGYYLALFLILWGLILRGISLEVGG
                     HINDRLWQGFWDFVFVFSNFLLAILFGAAAGNVARGVPLDAHGNFSMAFFTDFRVRGY
                     VGLLDWYTVSIAIFAAVILAAHGATYLTLKTEGPVHDRSATWAKYLWAAVVPLFFAIS
                     VESWVVRPDLPGRAIYNPFCWLGLLAVVASIITLISGLSTRRERRAFVGSNLLLVGLL
                     VTGGAAIFPVMLHSTLAPENSLTAYAVASSPSALLLASIWWPVGFMLATVYFVFISRR
                     YAGKVSVKRDTQGFY"
     gene            1634..1843
                     /locus_tag="VLJ17_09665"
     CDS             1634..1843
                     /locus_tag="VLJ17_09665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HSV23284.1"
                     /translation="MPEHLPRVVIVGGGFGDLAAAKALRRTPVDVSLIDRTDHHLYIV
                     KRIASSSAYIREWIVGERTKKAGRN"
     gene            1942..>2296
                     /locus_tag="VLJ17_09670"
     CDS             1942..>2296
                     /locus_tag="VLJ17_09670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23285.1"
                     /translation="MSEIGVPMSVRHTPGNLIRSVRVKRSIEITPERPEERIAAIEAR
                     SLRLEQPEQSAVGRYQALIRISAAMAAERDAGRLFPLVAAELRHVVNCVFIGISQYDE
                     GTNKTQWHLTMAGSGD"
BASE COUNT          414 a          635 c          673 g          574 t
ORIGIN      
        1 agattcgtgg gcggacccat ggcgggcgtc gccgttatcg ggcaacccaa tgttgcgacc
       61 cggcggctcg aaaatcccat cgaggttcca ggcgcactca gttttctcgc ctacggcact
      121 tttcaaagct atgtgcacgg cctggaggaa tatcccgagg atgcgtggcc cgacaacatc
      181 gagcttttgt actactcgtt tcacctgatg atcaccctag ggacgatgtt cgtcattctt
      241 atggcctatg ccagttttca gaattggcgc ggccgactgg aatccagcac ctggctgctc
      301 tgggtgttga tgctggcgtt tccctttcct tacatcgcca acacgctggg ctggatgacg
      361 gccgagctgg ggcgtcaacc atggctggtc tacggccttt ttcgcacccg cgacggcgtc
      421 agcaaagtgg tgagtcacgg cgacaccatt ttcacgttaa ttggcttcat cggcctttat
      481 tttgtgctcg gtctgctctt tctctatctg gtcggtcgtg agatcggcca cggtccggac
      541 gaagtgattg ccggccgtgg agaggagccg gctctatgat cgcgacatgg tacggcatcg
      601 tcagcttcat gctcatcgtc tatgtggcct tggacgggcg caacttcggc gctggaatgc
      661 tgcactggct tgtcgccaga actcccgagg agcggcggca agtcattgcc gcgatcggac
      721 cgctttggtc atggcatgaa gtgtggctcg tcggttttgg cgggacacta gtcgcggtat
      781 ttccacggct catggcctcg gcttttgccg gctattacct cgcgctcttt ctgattttat
      841 ggggcctgat tctgcgcggc atttccctcg aagttggcgg ccatatcaac gatcgcctgt
      901 ggcaaggatt ctgggatttc gttttcgtat tttccaattt tctcctggcg atccttttcg
      961 gcgcggcggc aggcaacgtg gcgcgaggcg ttccgctcga cgctcacggc aatttctcga
     1021 tggcattttt cacggatttc agagtccgcg gctatgtggg gctgctcgac tggtacacgg
     1081 tatccattgc gatcttcgcg gctgtcatcc tggcggctca tggcgcgacc tatcttacgc
     1141 tgaagacaga aggtccggtg catgaccgca gcgcaacatg ggcgaagtat ctctgggcag
     1201 cggttgtccc gctctttttc gcaatctcgg ttgagtcgtg ggtggttcgt cccgacctgc
     1261 ccggccgcgc gatttacaat ccattttgct ggttgggatt gctcgcggtc gtcgcctcga
     1321 tcatcacgtt gatttcgggc ctctcgactc ggcgggaaag gcgcgctttc gttgggtcga
     1381 atttgcttct cgtgggctta ttggtgaccg gaggcgcggc tatttttccg gtgatgcttc
     1441 attcgaccct tgcgcctgag aattcattga ccgcctacgc cgtcgcttcg agcccgagcg
     1501 ctttgctcct cgcctccatt tggtggccgg tcggtttcat gctggcgacc gtctatttcg
     1561 tttttatctc gcgacgctat gcaggaaaag taagtgtcaa gcgggacacc caaggttttt
     1621 actagagaca gcgatgcctg aacacctacc acgagtagtc atcgtcggcg gaggctttgg
     1681 agacctggca gccgccaagg ctctccgtcg aacgccggtc gatgtgagtc tgatcgaccg
     1741 caccgatcat catctctata ttgtgaagcg gatagcatca agctcggcct atatccggga
     1801 gtggatcgtg ggagaaagga ccaaaaaagc cggccgcaac tagtttcgaa cgttcaattc
     1861 cggccttttt taacctcgca gtcgtatata gttggcggta attgctttat gcgaccgaga
     1921 gcagcggaag aggatgcgct catgagtgaa ataggtgttc ccatgtcagt gcgccacaca
     1981 ccgggaaatc tgattcggtc ggtgagggtt aaacgatcga tcgaaataac tccggagcgc
     2041 cctgaagaga gaatagcggc gatcgaagcg aggtcattgc ggcttgaaca gcccgagcaa
     2101 tccgctgtgg gacgctatca agccctcatc cgcatctccg cagccatggc tgcggagcgc
     2161 gatgccgggc gattgtttcc actcgtcgcg gccgaactgc gccatgtcgt gaactgtgtt
     2221 ttcatcggaa tctcacagta cgacgaaggg acaaacaaga ctcagtggca ccttactatg
     2281 gccggcagcg gcgacc
//
LOCUS       DATILV010000426         2892 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3936883, whole genome shotgun sequence.
ACCESSION   DATILV010000426 DATILV010000000
VERSION     DATILV010000426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2892
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3936883"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..350)
                     /locus_tag="VLJ17_09675"
     CDS             complement(<1..350)
                     /locus_tag="VLJ17_09675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012385413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23286.1"
                     /translation="MTATRDELSNLLPTAKEVMQKIALAETEKASAEMRKQEKAEAEK
                     KALIDKLSKPSGKTDEEVIKQAANIIQRAVKNGLTEVQVYRFPNTLCTDNGRAINQQE
                     AGWENTLTGVPKEI"
     gene            790..>2892
                     /locus_tag="VLJ17_09680"
     CDS             790..>2892
                     /locus_tag="VLJ17_09680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007791363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3141 domain-containing protein"
                     /protein_id="HSV23287.1"
                     /translation="MPGDEKKLAAPARPAAGGAQLFGPFGPVIEYMIDAAQRSVLFWD
                     VMRQRGNQYLEHLAETAPHVLDYAVELIADGRTLDRPVNYALVRVIPPRGVEVDLTLR
                     PFVVVDPRAGHGPGIGGFKADSEIGVALKAGHPCYFVGFLPDPMPGQTIEDIARAEAI
                     FLEKVIALHPDADGKPCVIGNCQAGWAVMMLAAVRPELFGPIIVAGSPLSYWAGVKGQ
                     NPMRYTGGLAGGSWLAALTSDMGHGKFDGAGLVQNFENLNPSNTLWTKQYNLYSKIDT
                     EAARYLAFERWWGRHVNLNAEEIQFIVDELFVGNNLAAGRIQTSAGTALDLRNIRSPI
                     VVFCSKGDNITPPQQALGWVLDLYEDVDEIRSYGQTIVYTIHETVGHLGIFVSGGVAR
                     KEHGEFSSNIDLIDVLPPGLYEATFDAKTDETVSPDLVVGEWVMRCVPRTLDDIRALG
                     GNDAADDRRFATVAQVSEANLALYRTFLQPAVRTMVSAPMAEWSRRLHPLRLQYEGLA
                     DTNPFMATLGSMAEWVREHRSPAAKDNMLVVLQESMSQQIVAGLDTWRDVRDRFSEWM
                     FLSIYGSPFLQAAMGIDPAETRPLRKAGKSPLHSQLLQSRIAELKSHIATGGLRECMV
                     RGMLFVGMARTGPDERAFEAVRRMRSVEDGMPRLNLTEFKALIREQYFMLLIDEEAAL
                     AAIPDLLPADQQLRQKSLA"
BASE COUNT          554 a          837 c          862 g          639 t
ORIGIN      
        1 tagatttcct tcggcacgcc ggtcagcgta ttttcccagc cggcttcctg ttgattgatg
       61 gcacgcccgt tgtccgtgca gagcgtgttt ggaaagcgat agacttgaac ctcggtgaga
      121 ccgttcttca ccgcgcgctg aataatattc gcggcctgtt ttattacttc ttcgtcggtt
      181 ttgccagatg gtttgctaag tttgtcgatc aaagcctttt tctctgcttc cgccttttct
      241 tgctttcgca tctctgcgga cgccttttcc gtttccgcca atgcgatttt ctgcatcact
      301 tccttggccg tgggcagcag gttcgacagc tcatcacggg ttgcggtcat ggttggctcc
      361 gtcacgctat tcgaccggcg ttcacacggt cgcggtgagt agtcatcttg gcctttttat
      421 ttggcgcaag tcggcccgcg cgcctatgca aattttgaca caaaaccaac aatcggttca
      481 acgcggcgcc gtgtccgaga tcgggcagcg tgatcgaacg cagtcatatt ttgcctctgt
      541 tttcgctgtt cggccccatt cacactgtga tcacactgtg acaaaatcga ctcgacgttt
      601 cgattttatg caagttcctc cgtttggcat agcgcggtag aagaataatc agattctaca
      661 ttttttgcat agacggcgcc gcggaaattg agcttgctta gctcactctc aaggtgaaaa
      721 cgcgtcttta ctctggatct aaggccgcgc gtcgtcgcga gacgcacggt tcgcagaaat
      781 gggaaaaaca tgccaggcga cgagaaaaaa ttggctgctc cggcgcggcc ggcggccggc
      841 ggcgcgcaac tgttcggccc gttcggcccc gtaattgaat acatgatcga tgcggcccag
      901 cgcagcgtgc tgttctggga tgtcatgcgg cagcgtggca atcaatatct tgagcacctg
      961 gctgagactg ctccgcacgt actggactac gcggtggagc ttattgccga cgggcgcact
     1021 ctcgatcgcc cggtcaatta tgctctggtg cgggtcatac cgccacgcgg cgttgaagtg
     1081 gatctgacat tgcggccgtt cgtggtcgtc gacccgcgag cgggtcatgg gccgggcatc
     1141 ggtggattca aggccgacag cgaaatcggc gttgccctca aggccgggca tccctgttat
     1201 ttcgtcggct tcctgcccga tcctatgccg gggcaaacca tagaggacat tgcaagggcc
     1261 gaggcgatct tcctcgagaa ggtgattgcg ctgcatcccg atgcagacgg gaagccgtgc
     1321 gtgatcggca actgccaagc cggctgggcg gtgatgatgc tcgctgcggt tcgtcccgag
     1381 ctgttcggtc cgatcatcgt tgccgggtcg ccattgtcat actgggccgg cgtcaagggc
     1441 caaaacccaa tgcgttatac cgggggcctg gccggaggga gttggcttgc cgcactcacg
     1501 agtgacatgg gacacggcaa gttcgacggc gccgggctcg tgcagaattt cgagaacctc
     1561 aatccgtcga acacactgtg gaccaaacag tacaatctct actccaagat cgacacggag
     1621 gccgcgcgct atctcgcatt cgaacgctgg tggggccgtc atgtcaatct gaatgccgag
     1681 gagatccagt tcatcgtcga cgagctgttc gtgggcaaca acctcgcagc cggaaggatt
     1741 cagacgtctg ccgggaccgc gctcgacctg cgcaacattc gttcgccgat cgtcgtgttc
     1801 tgctccaagg gcgacaacat caccccgcca cagcaggcgc tcggatgggt tctcgacttg
     1861 tatgaagatg tcgatgaaat ccgctcgtac ggacaaacga tcgtctacac gatccacgaa
     1921 accgtgggtc acctcggaat cttcgtctcc ggcggcgtgg cgcgaaagga gcacggggaa
     1981 ttttctagca atatcgacct gatcgacgtt cttccgcccg gcctctacga ggcgacgttc
     2041 gatgcgaaaa ccgacgaaac ggtcagccct gatctcgtcg tcggcgaatg ggtgatgcgc
     2101 tgcgtgccga gaacgctgga cgatatccgc gcactcggcg gcaacgatgc tgccgacgac
     2161 cgccgtttcg cgacggtggc tcaagtatcg gaagcaaatc tcgccctcta ccgcacattt
     2221 ttgcagccgg ccgtgcgcac aatggtgtcc gcgccgatgg ccgagtggtc caggcggcta
     2281 cacccattgc gactgcaata cgaggggttg gcggacacga atccattcat ggcgacgctc
     2341 gggtcgatgg cagaatgggt gcgcgagcat cgtagtcccg ccgccaagga caacatgctc
     2401 gtggtcctgc aggaaagcat gtcgcagcag atcgtggcgg ggctcgatac ctggcgcgac
     2461 gtgcgcgaca ggttcagcga atggatgttc ttgtcgatct acggctcgcc gttcctacag
     2521 gcagccatgg gcattgatcc tgccgagacg cgtccgctgc gcaaggcggg aaagagtccg
     2581 ctacacagtc agctgctgca gtcccgcatc gccgaattga agtcgcatat tgctacgggt
     2641 ggcctgcgcg aatgcatggt ccgcggcatg ctctttgtcg gcatggcgag gaccggaccc
     2701 gatgagcgtg cgttcgaggc tgtgcgccgc atgcgttctg tcgaggatgg gatgccacgg
     2761 ctaaacctga ccgagttcaa ggccctgata cgcgagcaat atttcatgct gctcatcgac
     2821 gaggaagcgg cgctggctgc catcccggat ctgttgcccg ccgaccaaca gttgcgacaa
     2881 aagtcgcttg ct
//
LOCUS       DATILV010000427         6049 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4188222, whole genome shotgun sequence.
ACCESSION   DATILV010000427 DATILV010000000
VERSION     DATILV010000427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6049
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4188222"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(84..233)
                     /locus_tag="VLJ17_09685"
     CDS             complement(84..233)
                     /locus_tag="VLJ17_09685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23288.1"
                     /translation="MLLFILITAVSVLLSVLTTYAIPEIPTGFLTLMGISNGVYLGAK
                     VAQGP"
     gene            complement(263..607)
                     /locus_tag="VLJ17_09690"
     CDS             complement(263..607)
                     /locus_tag="VLJ17_09690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23289.1"
                     /translation="MRSPNGTLVLPGIAGAAALGAKVHTESQNSAAQTAAAAVARKEA
                     DKATIEAAQRAAAPLAVAAEIDVAEKAKTEAIKIAEAASARANAVYNPPDSQTPQWSD
                     LLINETRLVDGT"
     gene            complement(782..1003)
                     /locus_tag="VLJ17_09695"
     CDS             complement(782..1003)
                     /locus_tag="VLJ17_09695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23290.1"
                     /translation="MTTRIPDNLAKVPPDKVRETALPYVPLVPLADVRIIAVKEDMTL
                     AADVTTVIGITYPLAAIFLAESSLSRLSP"
     gene            complement(1690..2667)
                     /locus_tag="VLJ17_09700"
     CDS             complement(1690..2667)
                     /locus_tag="VLJ17_09700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV23291.1"
                     /translation="MKLKRRRFLYLAAGAAAFPAASRLANTQTYPNRPVRFIVSFAAG
                     GPNDIVARLVGQFLSEKMGQQFVIENKVGAGGNIGMQAVLGAPPDGYTIGFVTPNNAI
                     NATLYDNLPFDFIRDSTPVAGLMRLTNVMVVPPSLPVTNVAEFIAYVKANPAMVNMAS
                     GGTGTSPHMSGELFKQMAGINMIHVPYRGTGPAMNDLLPGRVQVMFDNLPGSIEHIRT
                     GKLRALGVTVPKRWDALPDVPAIAETLPGYEVTVWYGISAPKATPPDIVENLNAAVTA
                     VLADPKLKLRLAGLGGVSMPILPAEFGKLIADETEKWAKVVKLSGVKPE"
     gene            2907..3251
                     /locus_tag="VLJ17_09705"
     CDS             2907..3251
                     /locus_tag="VLJ17_09705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23292.1"
                     /translation="MTKTFGRVTVDDRGIRKGRTFLSFGTPFDLTWDQIDSWDSVEAV
                     LVSSQSQQVVSRVLELRTVGKLHHVGWSGSAADYDALIEEIRRWAPDKHKPGIQRQTS
                     AIREMRRGHIAD"
     gene            3587..4921
                     /locus_tag="VLJ17_09710"
     CDS             3587..4921
                     /locus_tag="VLJ17_09710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008962182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HSV23293.1"
                     /translation="MATSMPCVRSRHISLTALGFGLAIGLGSTINMLIITSASAAPVE
                     PVHSLAAKEKAPLIETLKGLVSIESGSGDREGLDKIADVIADRLKALGGAIEMIEPAP
                     IDTYRMVDTPRQIGKMVQARFTGTGTAKIMLIAHMDTVYQRGMLARQPFRIDGNRAYG
                     LGIADDKHGIALILHTLAILREMNFRDFGRITVLINGDEEVSSPGSRATLIRLGGEHD
                     VVFSCEGARVDSDQLSLTTAGIGAVVLNVKGRASHAGAAPERGRNALYELAHQILQTR
                     DLSNPETGLKMNWTIANAGTDHRNVIPANASAVADVRVLRVADYDGIEQKVRERIKKR
                     LIEDATVEMTFERRRPPLEMTPASKALARHAQGIYGEIGNTLIVRDVAEGGGTDAAFA
                     ALRTKAAVIERFGLRGFGAHSDEAEYIDLDSIEPRLYLLTRMIIDVSQGKTN"
     gene            5096..>6049
                     /locus_tag="VLJ17_09715"
     CDS             5096..>6049
                     /locus_tag="VLJ17_09715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23294.1"
                     /translation="MYSKSLLLLTTAASVCAVVSAYGQVVQPTPGVPGDYVLPDGSAK
                     PMVQENCTICHNLRNVVNSNKSREDWDNTINMMKAAGAPISDEQASQIKEYLTASFPE
                     KPRPKPTAISGPVQVKFQQWSLPTPGERPHDPLAMPDGSLWWSGQFANRLGRLDPKTG
                     EMKEYPIPIKGGPHGLINDKDGNVWYAGNWGGHIGKLDVNTGEYKFFPMPDPKARDPH
                     TPLFDKDGILWFSVQNGGFMGRLDPKTGDIKLFTPNGPPGQQPYALRFLSDGRQPWFS
                     YWGSNKIATIDPDKLELKEYTLPDVRTRIRRMGVTSDDMIWY"
BASE COUNT         1235 a         1853 c         1733 g         1228 t
ORIGIN      
        1 gctctccacg cggctggtgg gttaaaccga attagtagcc ccccgccgcg cctgcataaa
       61 atctccccca agctgatatc gcgtcacgga ccctgcgcga ccttggctcc caaatagacg
      121 ccgttgctga ttcccatgag ggtcaggaac cccgttggaa tttcgggaat cgcataggtg
      181 gtcaagacac tcaagagcac ggacacggct gtgatcagga tgaataacag catctggaag
      241 cgggcgacat cgatttcgcg ggttacgttc catcgaccaa gcgagtctca ttgataagga
      301 ggtccgacca ctgaggggtt tggctgtccg gcggattgta gacggcgtta gctctggcgc
      361 tggctgcttc cgcgattttt atcgcttcgg tcttcgcctt ttcggccacg tcgatctcgg
      421 cagctacggc caaaggcgca gcggctcttt gggcggcctc gatcgtggcc ttatcggctt
      481 cctttcgcgc cacggctgct gcggcggtct gggcggccga attttgcgac tcggtgtgaa
      541 ctttggctcc gagcgccgcg gcgccggcaa tgccgggcag caccagcgtg ccattgggtg
      601 atctcaatga ggtcgcccga cagcgccatc acatagacgg ccgaggccgc cacgaccagg
      661 gtccacagca agatttgcag ctgggagaga ctggcgtatc cgcccgtggt cgaaatgatg
      721 cgcaaaagcc aaaatgccct ttgtatgcct tcgtgcttca atctcagatg cgtgatgatg
      781 gttaaggtga caagcgcgac aacgatgact ctgctaaaaa aattgccgcc agcggataag
      841 tgattccgat gaccgtggtc acatcagcgg ccagcgtcat gtcctcctta acggcgatga
      901 ttcgcacgtc cgccagtggc acgagcggca cgtagggcaa cgccgtttcc cttaccttat
      961 ccggcggcac tttcgccaga ttgtcaggga tcctcgtggt caccgtccaa tcgtgtggtc
     1021 attgttgctg tcgagccgat cggggcgcct ttcgtcgaat ttttccgtgt tttccggaat
     1081 ggttcgccac cggaagcaga ccaagaagga agcattttcc gggatgcgta cggaactctt
     1141 tatggcgaac tggataattc cgccatgcgg ttgccagcgc ttgcgctgca agctttcgcc
     1201 cgtcgcttga atgatgcccg ccgccgcaac gttggagctg gcggtattgc aaccttgtcc
     1261 ggatggttga ttttgtgccc taccgggtga agtcaccaac acggtcgcta aaatgcacaa
     1321 ccatccaaaa taaaagcccc aactctttct gcccattacg gcccctctag tatccgtccg
     1381 caatcaaacc cgtcaaagcg gctgtcttcg ctcgcgaaag ccggcgcggc cgctggaacg
     1441 gctgaatcaa cccgttcagc agaatccgat caaagcaccg gtactgccat cgaatactgt
     1501 cctggtgatg ctctaaagaa cgcattcatg agcggccccc ggctgatcca tcgtcagccc
     1561 gacagtgctg ctcattcccc gccctctcgc aagctgaggg acaagggata tcaggggcag
     1621 agcccttgag ctagttggtt tcggatccca acagttttat gaatatgcga gtaaaaggat
     1681 ttgggtgcct cactccggct ttacgcccga gagtttaacc actttggccc atttttcggt
     1741 ctcgtcggca atcagctttc cgaactcggc tggcaatatt ggcatggata cgccgccaag
     1801 accggccaga cggagtttca gcttgggatc ggccagcacc gcggtcacgg ccgcgttgag
     1861 attttcgacg atatctggcg gcgttgcttt cggcgccgag attccatacc agacggtgac
     1921 ttcataaccc ggaagcgttt cggcgatcgc aggcacgtcg ggaagcgcat cccatcgttt
     1981 cggcaccgtt acaccgagcg cgcgtagctt tccggtcctg atgtgctcga tcgaacccgg
     2041 gaggttgtcg aacatcacct ggacgcggcc aggaagcagg tcgttcatcg ccgggcccgt
     2101 accacggtag gggacatgaa tcatgttgat accggccatc tgcttgaaca attcacctga
     2161 catgtgcggt gaggttccgg tgccgcccga cgccatattc accatggccg ggttagcctt
     2221 cacgtatgcg ataaactccg caacatttgt gaccggcagc gacggcggga ccaccattac
     2281 gttggtcaga cgcatcaagc cagcgaccgg tgtgctgtcc cggatgaaat cgaagggaag
     2341 attgtcatag agcgtcgcgt tgatggcgtt gttcggcgtg acgaaaccga tcgtatagcc
     2401 atcgggcggc gcgccgagca cagcctgcat gccgatattt ccgccggcgc cgaccttgtt
     2461 ttcgatcaca aattgttggc ccattttctc cgacaggaac tgcccgacga ggcgtgctac
     2521 gatgtcgttg gggccacctg ctgcgaatga gacaatgaag cgcaccggcc ggttcggata
     2581 ggtttgcgtg ttggcgagac gcgaagcggc tgggaacgcg gcagcacccg cggccaaata
     2641 cagaaatcga cggcgcttaa gtttcatcgc tatcctccca ttagcgacga aactaggtca
     2701 tggccacgtc atgcgaaacg tgagaaattg ccgcttgcgg ggaaagctgc cggcaccctt
     2761 gggtgctgac cgacaaccga tttgagaccg gttaagcggg tttgccgtta tgtcgcccct
     2821 ttcattggcc agtgatgcca tcacagctat cgcatttgga gaagtaccgc tcgcttttcc
     2881 tcccgatcgg ctttgcggag tcgcacatga ccaagacgtt cggacgcgta accgtcgatg
     2941 atcgaggaat tcgcaagggg cgaacttttc tttcgttcgg tacgccattc gacctgacat
     3001 gggatcagat cgacagctgg gattccgtgg aggcagttct cgtgtcctcg caatcgcagc
     3061 aggtcgtttc gcgtgtcctc gaattgagga ccgttggtaa gcttcatcac gtcggttggt
     3121 ctggctccgc cgctgactac gacgctctca tcgaagagat tcgacgatgg gcgccggaca
     3181 aacataaacc cggcattcaa agacagacaa gcgccatcag agagatgagg cgcggtcaca
     3241 tcgcagattg aataatgcat tgccgcatgg ccggttgaga ggtggtcggc ccggcaacaa
     3301 gagaaattgc cgctttccgg gaagccaccg cccctactct ctgcgtcgtc tttatacacc
     3361 gcgccaactc ggattggatt acgccgacgc ggcggcgcgc ctctgccaca gccaccgcca
     3421 gtgcaaattt cttccccagc gcatcatatt cccatagccg ctgtccttaa tctgcatttt
     3481 ctgcaagtct ctggttttgg tcatctcacc tccttttccg atttaactgg cagcgctgac
     3541 atctcgtgaa taaaattccg gcctcctgag ccacatggag tgcgccatgg ccacctcaat
     3601 gccctgtgtc cgttcccgcc atatcagcct caccgcgctt ggcttcggcc ttgcaattgg
     3661 tcttggctct accatcaata tgctgattat cacatcggct tctgcggccc cggttgagcc
     3721 cgtgcactcg ctcgccgcca aggagaaggc ccccctcatc gaaaccctca agggcctcgt
     3781 ctcgatcgag tccggtagcg gcgaccgcga ggggctcgac aaaatcgcgg atgtgatcgc
     3841 ggatcggctc aaagcgctcg gcggcgcgat cgagatgatc gagcccgctc caatcgacac
     3901 ctaccgcatg gtcgacacgc cgagacagat cggcaagatg gtgcaagcgc gtttcaccgg
     3961 caccggcaca gccaagatca tgctgatcgc ccatatggac accgtctatc agcgcggcat
     4021 gctggcgcga cagccgttcc gtatcgacgg caaccgcgcc tatgggttag gcatcgcgga
     4081 cgacaagcac ggcatcgccc tcatcctgca tacgctggcc atcctgcggg agatgaattt
     4141 ccgcgacttc ggccgcatta ccgtgctgat caatggggac gaagaggtga gttcgccggg
     4201 ctcgcgcgcg acgctcattc ggctcggcgg cgaacatgat gtggtgttct cctgcgaagg
     4261 cgcccgcgtc gattccgacc aattatcgct gaccacagcg ggtatcgggg cggtggtgct
     4321 caatgttaaa ggccgggcgt cccacgccgg cgcggctccg gaacgcgggc gcaacgcgct
     4381 ttacgagctc gcgcaccaga ttctgcaaac ccgcgatctc tccaaccccg agaccggcct
     4441 caagatgaac tggacgattg ccaatgccgg caccgatcat cgcaacgtga ttcccgccaa
     4501 cgcctccgct gtcgccgacg tgagggtgct gcgcgtcgcc gattatgacg gcatcgaaca
     4561 aaaggtgcgc gagcgcatca agaagcgcct tatcgaggac gccacggtcg agatgacctt
     4621 cgaacgccgc cggccgccgc ttgagatgac accggcttcc aaggcgctcg cccggcacgc
     4681 ccagggcatc tacggggaga tcggcaacac actcatcgtc cgcgacgttg cggagggcgg
     4741 cggcaccgac gcggcatttg cggcgctgcg gaccaaggcc gcagtcatcg agcgatttgg
     4801 actgcgcggc ttcggtgcgc actccgacga agccgagtac atcgacctcg actcaatcga
     4861 gccgcggctt tatctgctca cccggatgat catcgatgtt tcgcagggca agacgaattg
     4921 agggacggag cgggcgtccc gcccgcaact ttatattgtt tcctttgcga gatacgacgg
     4981 ggcgcctgcg ctcagcctgc gctccatctc cgcttgacga cacgcccggt tcaccggcaa
     5041 gctagcggca agaagccaat aaaattgctt tttgccaccc acccggagcc cctctatgta
     5101 ctccaaatcg cttctcctac tgacaaccgc tgcatcggtc tgtgccgtgg tgtctgctta
     5161 tggccaggtg gttcagccca cgccgggcgt acctggggat tacgtccttc ccgatggcag
     5221 cgccaagccc atggtgcagg agaattgcac gatctgtcac aatcttcgca acgtcgtaaa
     5281 ctcgaacaag tcgcgtgagg attgggacaa tactatcaac atgatgaagg cagcaggcgc
     5341 cccgatctcg gacgagcagg cgagccagat caaggaatat ctgaccgcga gctttccgga
     5401 aaaaccgcga cccaaaccta ccgcgatcag cggcccagtc caggtcaagt tccaacaatg
     5461 gtcgctaccg acaccgggcg agcgcccaca tgatccgctg gcgatgcccg acggctcgct
     5521 gtggtggtcg gggcagttcg ccaaccggct gggccggctc gaccccaaga ccggcgagat
     5581 gaaagaatat ccgatcccga tcaaaggtgg cccccatggg ctgatcaacg acaaggacgg
     5641 caatgtctgg tacgccggca attggggcgg ccacatcggc aagctcgatg tgaataccgg
     5701 cgagtacaag ttcttcccga tgcccgaccc gaaggcgcgt gatccgcaca cgccgctgtt
     5761 cgacaaggat ggcattctct ggttcagcgt gcagaacggc ggcttcatgg gccggctcga
     5821 ccccaagacc ggcgacatca agctgttcac ccccaacggc ccacccggac agcagcctta
     5881 tgcgctgcgc ttcttgtcgg acggccgaca gccctggttc agctattggg gctccaacaa
     5941 gatcgcaacc atcgatccgg acaagctgga actgaaggaa tacactctgc cggatgtccg
     6001 cactcgcatt cgccgcatgg gcgtaacctc cgacgacatg atctggtac
//
LOCUS       DATILV010000428         3061 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2403213, whole genome shotgun sequence.
ACCESSION   DATILV010000428 DATILV010000000
VERSION     DATILV010000428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3061
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2403213"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(206..427)
                     /locus_tag="VLJ17_09720"
     CDS             complement(206..427)
                     /locus_tag="VLJ17_09720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23295.1"
                     /translation="MARIIVNPPPFGRDVLAADFLKALTVLHDGGFELRSGTKLTSRY
                     AVLVVEDSTADPAIEKLASANLKVARDTH"
     gene            577..2370
                     /locus_tag="VLJ17_09725"
     CDS             577..2370
                     /locus_tag="VLJ17_09725"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HSV23296.1"
                     /translation="MSRIDKFAIATKIVFWVSLLVCMTQSTARAAELSAHSPTTPIRH
                     LIIIVGENHSFDNLFGAYQPVGGQTVFNLLSEGIINADGTPGPHFSKAEQWQASVVDK
                     YSIAPRRTQPFAKLPQPNSTFALGRKPNEPDPRFPADLPNGPFQLSHYAAYQLSFTGD
                     PVHRFFQMWQQFDEGRNDLFAWVATTAGMGGEGKPPPIPFTDQSTHQGAVAMGFYNMT
                     QGDVPVFKFIADRYAMSDNFHQGIMGGTGASFIYLGTGDLAYYSDGNGNPATPPTRLI
                     EDPDPQPGSNNWYKQDGYESGSYVNCADTSQPGVAQIVTYLRTHGRPSGCEGGHYYLV
                     NNYGPAYNADGTVVDVKKHPYSLPPQTLPNIAEALSKANVSWKYYIGGLKRGGAQHSG
                     ANDTWCSICNPLQYSKNIMTSALRNRIVDVSEFYGDAENGSLPEVSFVRPYEPYSGHP
                     ANSAVSAYEYFVLSIANKVISKPGLFASTAIVVTLDEGGGYYDSGYIQPLDFFGDGTR
                     IPMLVISPYVKPGTIDHTYSDHGSILKFIEKNWSLARLSPRSRDNLPNPIRSPDNPYV
                     PINGPAIGDLMTIFDFAHRQVGPPLIIPGGI"
     gene            2553..>3061
                     /locus_tag="VLJ17_09730"
     CDS             2553..>3061
                     /locus_tag="VLJ17_09730"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV23297.1"
                     /translation="MAEFDLHIKGGTVVDGTRVPRFRGDIWIKDGKIAQIGGRAPGAA
                     KKVIDADGMVVAPGFVDLHTHYDAQIRWDPWCTISGWHGVTSVVLGNCGFGFAPVKPA
                     DRDRALLMMTRTEQIPYESMKAGMPWNWESLPQWLDNLDALPKGVNVVSYVPVSPLMV
                     YVMGLEAAKS"
BASE COUNT          654 a          895 c          898 g          614 t
ORIGIN      
        1 tgggaagccc tccgccgact ggcttcttct ccggatacgc agttgaagcg ggtgattgac
       61 gagcgggctg tttagcaaca gcatcgcctc agaaccgaga tggccgacgc gcccgacggc
      121 gggctgatgg cggatacggg attcccgagt atcaccggcg ccgggtcgga ttggcagtag
      181 ggggcctggt tccgtcagcg cagtgtcaat gggtatcgcg cgcaactttc aggttcgctg
      241 aggcaagctt ctcgatggcg ggatcggcgg tcgagtcttc gaccactaac accgcgtacc
      301 tggaggtcag cttggtgccg ctgcgaagct cgaaaccgcc gtcatgcaaa actgtcaacg
      361 ccttcaaaaa gtcagccgcc agaacgtcgc ggccgaacgg cggaggattt acgattattc
      421 gtgccatagg aacaaattct cctaggggtt gagtctgttc attatcgatc ttggcagatt
      481 gtgtctatcg cgccggtttt tagaattaac gcacggcgaa agatcgttgc gactaattgc
      541 ggagcagttt acggtcgaag ccgcggaggg tgatcggtgt caaggatcga caagtttgca
      601 atcgcaacga aaatcgtttt ttgggtttcg cttcttgtct gcatgacgca gtccacggcg
      661 cgtgcggcgg aactctcggc tcactctccg acaactccga ttcgccattt gattatcatc
      721 gtcggcgaaa accatagttt cgataattta tttggcgcat atcagccggt cggcgggcaa
      781 accgtattta acctgctttc cgagggaatc atcaatgcgg acgggacgcc cggtcctcac
      841 ttcagcaagg cggagcaatg gcaagcgagc gtagttgaca agtactcgat cgcaccccgg
      901 cgcacacagc cattcgcgaa actgccgcag cccaattcca ctttcgcgct gggacgcaaa
      961 cctaatgagc cggatccgcg attccccgct gatttgccca atggaccatt tcagctaagc
     1021 cactacgccg cgtatcagct ctcgttcacc ggcgatcccg ttcatcgttt ctttcagatg
     1081 tggcagcagt tcgacgaggg cagaaacgat ttgttcgcct gggtcgcgac caccgctggt
     1141 atgggcggcg agggcaagcc gccgccaatt ccattcaccg accagagtac ccatcaaggc
     1201 gcagtcgcga tgggctttta caacatgact cagggggacg tgccggtttt caagtttatc
     1261 gccgaccgct acgcgatgag cgacaacttt caccagggga ttatgggcgg caccggcgcc
     1321 agcttcattt atctgggcac cggcgatctt gcttactaca gcgacggcaa cggaaatcct
     1381 gcgacgccgc ccacgaggct gatcgaagat ccggacccgc agcccggttc caacaactgg
     1441 tacaagcagg acggctacga gagcggctca tatgtcaatt gcgcagacac gtcgcaacca
     1501 ggggtcgcgc agatcgtgac atatttgcgc acgcacgggc ggccctccgg ctgcgagggc
     1561 ggacattact atctggtcaa caactatgga cccgcataca acgcagacgg aactgtcgtc
     1621 gatgtgaaaa agcatcccta cagcctgccc ccgcagactc tgccgaacat cgccgaggcg
     1681 ctgagcaagg cgaacgtatc gtggaagtac tacatcggcg ggctcaaacg cggcggggcg
     1741 cagcactcgg gcgccaacga cacctggtgc tcgatatgca atcccttgca gtacagcaag
     1801 aacatcatga ctagcgcgct ccgcaacagg attgtcgatg tttcagaatt ctacggcgac
     1861 gccgagaacg gcagtctgcc ggaagtctcc ttcgtgcgcc cgtatgagcc gtactcggga
     1921 catccggcta actccgcagt ttctgcttac gagtatttcg tgctcagcat cgcgaacaaa
     1981 gtcatcagca agccgggcct gttcgcatca accgcgatcg tagtcactct ggacgagggc
     2041 ggcggctact atgattcggg ctacatacag ccgctcgatt tttttggcga tggtactcgg
     2101 attccgatgc tcgtgatttc gccctacgtt aagccgggaa cgattgacca tacctattcc
     2161 gaccacggat cgattttgaa attcatcgaa aaaaactgga gcctggcgcg tctgtcgccg
     2221 cgcagccgcg ataatctgcc caacccgatc cgatcgcctg acaatcctta tgttcccatc
     2281 aacggtcccg cgattggcga cctgatgaca atcttcgact tcgcgcacag acaggtgggc
     2341 ccaccgctga tcatccccgg cggaatctga gcgtggcgat caccgggacg aacgctcccg
     2401 agtgaccaaa atgaggcgat tggtcggcag cgtcgagttt gaattttcgc ccgcacttgc
     2461 ataagaatcg gtcttggctg ggataagacg cgcagccggc gcgagcgcac acaacagttc
     2521 aaattgtcct tacccacgac gaggagggaa caatggcgga attcgatctt cacatcaaag
     2581 gcggcaccgt agttgacgga acgcgggtgc cacgttttcg cggcgacatc tggatcaagg
     2641 atggcaaaat cgcgcagatc ggcgggcgcg ctcccggcgc cgcgaaaaaa gtcatcgacg
     2701 ctgacggtat ggtcgtcgcg cccgggttcg tcgatctgca cactcactac gacgcgcaga
     2761 tcaggtggga tccctggtgc acaatttccg gatggcacgg cgtgacctcg gtggtgctcg
     2821 gcaactgcgg cttcggcttc gcgccggtga agccggccga ccgcgaccgg gcgctgctga
     2881 tgatgacccg caccgagcag atcccctatg agtcgatgaa ggcggggatg ccctggaact
     2941 gggagagcct gccgcagtgg ctggacaacc tcgatgcgct gcccaagggc gtcaacgtgg
     3001 tcagctacgt gccggtctcg ccgctgatgg tctatgtgat gggcctggag gcggcgaagt
     3061 c
//
LOCUS       DATILV010000429         9383 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2146621, whole genome shotgun sequence.
ACCESSION   DATILV010000429 DATILV010000000
VERSION     DATILV010000429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9383
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2146621"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..680
                     /locus_tag="VLJ17_09735"
     CDS             <1..680
                     /locus_tag="VLJ17_09735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007761608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV23298.1"
                     /translation="NDPEAAYRTVQEFSDRKGVVGFMVTSPRYKPVHDNTYIKTYALL
                     EETGKPIAFHAAYNWNDQSLAMTNRFISVHALGFMWFNMVHMTNWVINGLPERFPKLK
                     VMWVESGLTWAYSLMQRLDHSYMMRTSDCPSLKRKPSEYMREMFYSTQPMEIPDDPSI
                     LEATFKMISAETQLVWSSDYPHWDFDLPSVIYDLPFLKEQAKRNILGGNAARLFGLDP
                     TPVKKIP"
     gene            677..2524
                     /locus_tag="VLJ17_09740"
     CDS             677..2524
                     /locus_tag="VLJ17_09740"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015664445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family oligoendopeptidase"
                     /protein_id="HSV23299.1"
                     /translation="MTITPAAKRPRAPHQRSKKSRSATGGVGALPEWDLSELYPGLDS
                     PEIAGDLVRADARCLAFGQRYKGSLAALASGPQGGEALAVAIREFEAIDDLIGRIVSF
                     ASLVYSGNTADPLRAKFFGDVQERITSSSSHLLFFSLELNKIDDAVLEQAMAAPALSH
                     YRPWIEDVRKEKPHQLEDRIEQLFHEKSITGQNAWTRLFDETVATLRFKIDAKTLPIA
                     PALNLLQDRSPATRKAAAQALGRTFAQNLRTFTSITNTLAKDKEISDRWRGFADIADA
                     RHLANRVERDVIEALAAAVRAAYPRLSHRYYALKARWFGKKQLPHWDRNAPLPDVPSR
                     PIPWQEAKDTVLSAYRAFSPAMAEIAERFFSNRWIDASVRPGKVPGAFSHPTVPSWHP
                     FILLNYQGKPRDVMTLAHELGHGVHQVLAAPNGALMAPTPLTLAETASVFGEMLTFHR
                     LLSTTTDARRRKAMLASKVEDTINTVVRQIAFYTFERAVHGERRNGELTADRLCQIWL
                     EVQRESLGPAIDLKVGYETFWVYIGHFIHSPFYVYAYAFGDCLVNSLYAVYEKSHDGF
                     AERYLAMLAAGGTKHHAELLRPFGLDARDPTFWQGGLSMIEGMIDELEG"
     gene            complement(2557..3792)
                     /locus_tag="VLJ17_09745"
     CDS             complement(2557..3792)
                     /locus_tag="VLJ17_09745"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSV23300.1"
                     /translation="MAVPRNIVVIGGGPAGVFAAIEAKRRDPHAAVTLISEEPCEPYE
                     RPPLSKAVLLGRASAADAPIAGPKGLAGHGVSLECSTICLTIDRIAQEIVTASGRRLA
                     YDALVIATGSLVRQISVLPLGAPHVHYLRTEAHARALADELRTAQHVAVVGGGLIGLE
                     VAASATELGARVTVIELLPRVLARVCDEDTSARVHDAHRRHGVDIRLNTALTDAQSEP
                     DGRIALKTSAGETLIADLVVVGAGAIPDDRLAAAAGLRVDSGIVVDAQCRTSDPKIFA
                     AGDVVRFPGLHGLVRQEDWRHAQDQGAIAGRNAAGANDEYRSVPSFWSEQFDLYIQGV
                     GSPPANPDQRVRRQGTGAGAAQITFELSGPYIAYALATNAQRDVATVRRLIERRIAVH
                     PVVLADPTKPLADFLKVRT"
     gene            complement(3800..4309)
                     /locus_tag="VLJ17_09750"
     CDS             complement(3800..4309)
                     /locus_tag="VLJ17_09750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23301.1"
                     /translation="MPSESARVMSAAEARFRINAPNSKPRHVKIIALDSGSEAVVKHL
                     AQLRWNNATFFIASAFASEPPGRRFSVSGWLSDLAGRTKDLIDEVKGADLVIMVATAG
                     ENAQAATLIGEACSLKRVNTTGLILGGGAATDEMLSKTLSQLRPWSLMLVIANSEDYI
                     EDMLIALRA"
     gene            complement(4319..5605)
                     /locus_tag="VLJ17_09755"
     CDS             complement(4319..5605)
                     /locus_tag="VLJ17_09755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007815491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HSV23302.1"
                     /translation="MLRKEQNDLLTQTGPGTPGGRLFRSYWLPALLAEELPENECPPV
                     RVKLLSERLLAFRDSDGRLGLIDEFCAHRGVSLWFGRNEEKGLRCSYHGWKYDVTGQC
                     IDVPSEPEESGFCRKIMLKSYPLIERGGVLWTYMGPKEQVPPLPEWEFATVPDHQRFV
                     SKRLQECNWLQAMEGGIDSSHVSFLHRGDINTDPLFKGARGNQYNLADARPVFEVVES
                     AGGLYIGARRNAENDQYYWRITQYVLPSFTMIAPRGNHSVHGHFWIPIDDENCWTWSF
                     DYHPIRNLTDAEIAAMRDGRGIHVKCAPGTFRPLANKDNDYQIDRAAQKAGRSYSGVE
                     GFGMQDASIQESMGPIVDRAKENLVSTDNGIIMARHRLLRSIKALVDKGEVPPGVDPA
                     HQRVRSAAVVLPRDQAFKDAAREALMARPGVAPASV"
     gene            5884..6192
                     /locus_tag="VLJ17_09760"
     CDS             5884..6192
                     /locus_tag="VLJ17_09760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011494297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-heme iron oxygenase ferredoxin subunit"
                     /protein_id="HSV23303.1"
                     /translation="MPSKIELCNSGDVAIGTALKVEKQGLCVAVFNVDGEFYVLDDQC
                     THGPGSLSEGYIEGDVVECNFHNGQFNIRTGEVVLPPCMIPMKTYPTSVENGKVVIEV
                     "
     gene            6332..6958
                     /locus_tag="VLJ17_09765"
     CDS             6332..6958
                     /locus_tag="VLJ17_09765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23304.1"
                     /translation="MAKTAIVSEELAKKFATEKDTPYTRWVHAEGLDIIAAHYVPSLH
                     TVELKPWARRGGKGVFINHEASRTSNDCYVCEIPAAQKLEPQRQLFEEMILVLDGRGS
                     TTVWNDAGNRITFEWKAGALFAVPLNTWHQHFNGSGREPVRYVAVTNAPPVINLYEDI
                     DFVFGTKHDFRDRFNGEPDYFSAKGEQKGLLLQTNFVADAVNLPLIAA"
     gene            6995..7462
                     /locus_tag="VLJ17_09770"
     CDS             6995..7462
                     /locus_tag="VLJ17_09770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23305.1"
                     /translation="MAKGSMNSHISQFPIGTYKKAHRHGPGAHVIILSGEGYSLMWPE
                     GDAPRLYEWQVGSMIVPPNMWLHQHFNTGATPARYLAFKHEVVSIRNAQGVPKAWISR
                     RIGGDQIDYADEAPEIRRKFVEALAKNSLTPKMEAAYEAELADLAPLPAKSVA"
     gene            7476..8261
                     /locus_tag="VLJ17_09775"
     CDS             7476..8261
                     /locus_tag="VLJ17_09775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013945739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HSV23306.1"
                     /translation="MELAVPDLLAIFSGSLVGFILGVIGGGGSILAVPLLVYVVGVKS
                     PHIAIGTSSIAVALSASANLIDHARRDHVCWPVAILFAISGVAGAALGSTLGKHTDGQ
                     KLLVLFGILMVVVAVSVALKREGGSKPQVLLDRRNAPWIIGIGFVVGGLSGFFGIGGG
                     FLVVPGLVTATSMAMIVAIGSSLVSVTAFGLTTAANYALSGLIDWRLVLLFVGGGIAG
                     GLVGGRLATRLASQQRALSMVFAVVVAAVGVYVIVRGVAKLHG"
     gene            complement(8363..>9383)
                     /locus_tag="VLJ17_09780"
     CDS             complement(8363..>9383)
                     /locus_tag="VLJ17_09780"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSV23307.1"
                     /translation="RARGFKKLPCAVVLGAPPCVTFASVQKLPETLDELHVAGALVGA
                     PINVVKAKTVDLLVPAEAEIVIEGLIDTEYLEPEAPFGESHGHVNLQEFNAYMDVTCI
                     TRRCDAILTSIISQVTPSESSLIKRIGMEPLFLNFLRNTLGIKGIKRVSMHEPLTNIR
                     KVIALVVERDIAPTELWRALYGAAILHRAAGKYVIAVNDDIDPENADAILWAMSYRAN
                     PTLDMHLLPHRDQGHGPRSKRNNGEDASVLIDATLKENFPPISLPKREYMENARKIWE
                     ELGLPKLKPQQPWYGYSLGEWSEELDAAATRATSGDYFATGKQLAKRRRKDVRMNTEV
                     RNVKE"
BASE COUNT         1745 a         2937 c         2870 g         1831 t
ORIGIN      
        1 tcaacgatcc ggaggcagcc taccggaccg tgcaagagtt cagcgaccgc aagggcgtcg
       61 tcggcttcat ggtgacgtcg ccgcgctata agccggtgca cgacaacacc tacatcaaga
      121 cctatgcgct gctggaagaa acgggcaagc cgattgcctt ccacgccgcc tacaattgga
      181 acgatcagtc cctggcgatg actaaccgct tcatctcggt ccatgcgctg ggcttcatgt
      241 ggttcaacat ggtccacatg accaactggg tgatcaatgg cctgccggag cgctttccca
      301 aactcaaggt gatgtgggtc gagagcggcc tcacatgggc ctacagcctg atgcagcggc
      361 ttgaccactc ctacatgatg cggacctctg attgcccgtc gctcaaacgc aagccgagcg
      421 aatacatgcg cgagatgttc tactcgaccc agccaatgga aatacccgac gacccgtcca
      481 tcctggaagc gactttcaaa atgatcagcg cagagaccca gctcgtgtgg tcgtcggact
      541 atccacactg ggacttcgac ttaccgagcg tgatctacga tctgcccttc ctcaaagagc
      601 aggccaagcg caatattctc ggcggcaacg cggcacggct gtttgggctc gatccgacac
      661 cggtgaagaa gattccatga ccataacacc ggccgcaaag cgcccgaggg caccacatca
      721 gcgatcgaaa aaaagccgca gcgctacggg tggcgtggga gccctgcccg agtgggacct
      781 gtccgaactc tacccaggcc tcgattcgcc tgagatcgcc ggcgatcttg tccgcgctga
      841 tgcccggtgt cttgcgttcg ggcagcggta caaaggcagc cttgcggcgc tcgcaagcgg
      901 accgcagggt ggcgaggcgc ttgcggtcgc gattcgggag tttgaggcga tcgacgatct
      961 catcggcagg atcgtttcgt ttgcgagtct ggtctactca ggcaacaccg ccgatccgct
     1021 ccgcgccaaa ttcttcggtg atgtgcagga gcgcatcacc tcatcgtcct cacacctgct
     1081 gttcttttcg ctcgagctca acaagattga tgacgccgtg ctggaacaag ctatggctgc
     1141 cccagcgctc agccattacc ggccgtggat cgaggatgtc cgcaaggaaa agccccatca
     1201 actcgaggat cgtatcgagc agctcttcca tgaaaaatcc atcaccggac aaaatgcctg
     1261 gacccggttg ttcgacgaga ccgtcgcaac tctgcgcttc aagattgacg ctaagacact
     1321 tcccatcgcg ccggcgctca acctgctgca ggaccgcagc cccgcgaccc gcaaggccgc
     1381 cgcgcaagcg ctaggccgca ctttcgcgca aaatttgcgc acgttcacat cgatcaccaa
     1441 cacgctcgcc aaagacaagg aaatctccga tcgctggcgc ggctttgccg atattgccga
     1501 tgcacggcac ttggcgaacc gggtcgagcg cgatgtaatc gaagcactgg cggcggcggt
     1561 acgtgccgcc tatccgcggc tgtcccatcg ctattacgcg ctcaaggcgc gttggttcgg
     1621 caagaagcag ctgccgcact gggatcgcaa tgcgccgctg cctgacgtgc cgtcgcgccc
     1681 gattccgtgg caggaggcca aggacaccgt gctgtcggcc tatagggcgt tttcacccgc
     1741 catggcggaa atcgccgaac gcttcttctc caatcgctgg attgatgcct cggtgcgccc
     1801 cggcaaggtc ccgggtgctt tttcgcatcc cacagtgccg tcgtggcatc cgttcattct
     1861 gctcaattac cagggcaagc cccgtgacgt gatgacgctc gcccacgagc ttggccacgg
     1921 cgtccaccaa gttctggcgg cgccgaacgg cgccttgatg gcgccaaccc cgctcacgct
     1981 cgcggaaacc gcaagcgtct tcggggagat gctgaccttt caccgcttgc tctccaccac
     2041 caccgacgcc aggcgacgca aggcgatgct ggcatcgaaa gtcgaagaca cgatcaacac
     2101 ggtggtgcgc cagatcgcgt tttatacgtt cgagcgcgcg gtgcatggcg agcgccgcaa
     2161 cggcgaattg acggcagacc ggttgtgcca gatctggctg gaggtgcagc gcgagagcct
     2221 ggggccagct atcgacctca aggtaggtta tgagaccttt tgggtctaca tcggccactt
     2281 catccattca ccgttctacg tctacgccta tgcgttcggc gattgcctgg tgaactcgct
     2341 ctatgcagtc tacgaaaaat cccatgacgg ctttgcggag cgctatctcg ccatgttggc
     2401 ggccggcggt accaagcacc atgcggagtt gttgagaccg ttcgggctcg acgctcgtga
     2461 tcccacattc tggcaaggtg gcctgagtat gatcgaaggg atgatcgacg agttggaagg
     2521 ctgagctgag tgtgaaagta ggcagcatat cgcgtgttat gtcctcacct tcagaaaatc
     2581 cgcaagcggc ttcgtcgggt cggccagcac aactggatgg acagcgatcc gccgctcgat
     2641 cagccgccgc accgtggcaa catcgcgttg cgcgttggta gcgagcgcat aggctatata
     2701 aggcccgctt aactcgaagg tgatctgcgc ggcacccgcg ccggtacctt gccgccgcac
     2761 ccgctgatcg gggttcgccg gcggcgatcc gacgccctgg atgtaaagat cgaactgctc
     2821 cgaccagaac gacggtacac tgcgatattc gtcgtttgct cctgccgcat tgcgaccagc
     2881 gatcgcgccc tggtcctggg catggcgcca gtcttcctga cgcactaggc catgtagtcc
     2941 cggaaatcgg actacatcac cggcggcgaa gattttagga tccgaggtgc ggcactgtgc
     3001 gtcgaccaca attccgctgt ccaccctgag ccccgccgcc gcggcaaggc gatcgtccgg
     3061 tatggcgccg gcaccaacca caacgagatc ggcaatcaat gtctcaccgg cactggtttt
     3121 aagcgcaatg cgcccatcgg gctcggactg tgcgtccgtc aacgccgtgt tgaggcggat
     3181 gtcgacgccg tggcggcgat gggcgtcatg aacgcgggcc gacgtatcct cgtcgcaaac
     3241 gcgcgccaac acacggggca gaagttcaat caccgtgacc ctagcgccga gctcggtagc
     3301 ggaggccgcc acttcgagcc caatcagtcc gccgccaacg acggcaacat gttgcgccgt
     3361 cctgagttcg tcggcgagcg cccgggcgtg cgcctcggtg cgcagatagt gaacgtgggg
     3421 agcgccgagc ggcaggacag aaatttggcg caccagcgag ccggtcgcaa tcaccagcgc
     3481 atcatatgca agccgccgtc cggatgcggt gacgatttcc tgcgcgatac ggtcgatggt
     3541 taagcatatc gtactgcatt ccaggctcac accgtggccg gcgagtccct tcgggcccgc
     3601 gatcggggca tctgcggccg acgccctgcc gagcaatact gcctttgaca gcggtggccg
     3661 ctcatagggc tcgcatggtt cctcggagat gagcgtgacg gctgcgtgcg gatcgcggcg
     3721 cttggcttcg atcgcggcaa agacgcccgc agggccgccg ccgatgacca caatattccg
     3781 cggtaccgcc atttccgttt caagcgcgca gtgcgatcag catgtcctcg atatagtctt
     3841 cactgttggc gattacgagc atcagcgacc acggacgcaa ctgcgacagc gtcttcgaca
     3901 gcatctcgtc ggtagcggcc cccccgccca gaatgagccc cgtggtgttg acccgcttga
     3961 ggctgcaggc ttccccgatc aaggttgcgg cctgagcgtt ttcaccggcc gtcgccacca
     4021 tgatgacgag gtcggcgccc ttgacttcgt cgatcagatc cttggtgcgt ccggcaaggt
     4081 cgctcagcca ccccgatacg gagaagcggc gcccgggcgg ctcgctcgca aatgccgacg
     4141 caatgaagaa ggtcgcgttg ttccagcgca attgggcaag atgcttgacc acggcctcgc
     4201 ttcccgaatc gagtgcgatg atcttgacgt gccgcggttt cgaattgggc gcgttgattc
     4261 gaaaccgcgc ctccgccgcg ctcatcactc gtgcgctttc gctcggcatc ccgatagcct
     4321 acaccgaggc tggcgctacg cccgggcgcg ccatcagggc ctcccgggcg gcgtccttga
     4381 aggcttggtc acgcggcagc acgaccgccg ccgacctcac gcgctggtgc gccggatcga
     4441 cgcccggtgg cacctcgccc ttgtccacca gggccttgat ggagcgcaaa agccggtggc
     4501 gcgccatgat gatgccgttg tcggtcgaca ccaggttctc cttggcgcga tcgacgatcg
     4561 gccccatgct ctcctggatt gaggcgtcct gcatgccgaa gccctcgacg ccgctgtagc
     4621 ttcgcccggc cttctgagcc gcgcgatcga tctgatagtc attgtccttg ttggcaagcg
     4681 gccggaacgt accaggcgcg catttgacat ggatgcccct gccgtcccgc atggcggcga
     4741 tctcggcgtc ggtgagattg cggatcggat ggtagtcgaa gctccaggtc cagcaattct
     4801 cgtcgtcgat ggggatccag aaatgcccgt gcaccgaatg gttgccgcgc ggcgcaatca
     4861 tggtgaacga cggcaacacg tactgggtga tccgccaata atactggtcg ttctcggcgt
     4921 tgcgccgcgc cccgatatag agtccaccag cgctctcgac cacttcgaag accggccgcg
     4981 cgtcggctaa gttgtattga ttgcccctgg cgcccttgaa cagcggatcc gtgttgatat
     5041 cgccgcgatg caggaacgac acgtggcttg aatcgatgcc gccttccatg gcctgcagcc
     5101 agttgcattc ctgaaggcgc tttgaaacga aacgctgatg gtccggtacg gtggcgaatt
     5161 cccactcggg cagcggtggg acctgctcct tcgggcccat ataggtccac agcacgccgc
     5221 cacgctcgat cagcgggtag gatttaagca tgatcttgcg gcagaaaccg ctctcctcag
     5281 gctcggacgg cacatcgatg cattggcccg tcacatcgta tttccagccg tgataggagc
     5341 agcgcaggcc cttttcctcg ttgcggccga accaaagcga cacgccacgg tgggcgcaga
     5401 attcgtcgat caggccgagc cggccgtcgc tgtcgcgaaa cgccagcagc cgctcggaca
     5461 gaagcttcac ccgcaccggc ggacattcgt tttcgggcag ttcctctgcg agcagcgcgg
     5521 gcagccaata gctgcggaac agcctgccgc cgggggttcc gggaccggtc tgggtcagga
     5581 gatcgttctg ttcttttcgc agcacgcggt tcctccggtt tcatcgaatc ggccaaagac
     5641 acgtacaaag atttgtgcgg gcatttgact acggccatcg ccgctccccg cgagcgggag
     5701 tagaagcgcc gtgccaattg cgattgcccg ttcagctggc cgacgcattg acctgcaacg
     5761 atgcctatgg tctatgagac cttaagtaaa cccttgcaaa atgccgtgtt tttgacgtcg
     5821 agagcgtact ccgcggctct cccggcgtca acgaacccga cccaaggtta tctcagagct
     5881 gccatgccct cgaagatcga actctgcaat agcggcgatg tcgcgatcgg caccgccctc
     5941 aaggtcgaga agcaaggatt gtgcgtggcg gtctttaacg tcgatggcga attctacgtg
     6001 ctcgacgacc agtgcaccca tggcccaggg tcgctctccg agggttatat cgagggtgat
     6061 gtggtcgagt gcaatttcca caacggccag ttcaacatcc gcaccggcga agtggtgctc
     6121 ccgccgtgca tgattccgat gaagacctat ccgacctcgg tcgagaatgg gaaggtcgtg
     6181 atcgaggttt gaaggcgcat ggtataggat gggtcgagcg cagcgagacc atcaacagcc
     6241 tctcagcgcg gcacgttctt gatgggtttc gcaaaaagct caacccatcc taagagtgct
     6301 gccgagaagg cggtcatcaa gggagtcccg catggccaag accgctatcg tttccgaaga
     6361 actggcgaag aagttcgcaa ccgagaagga cacgccctat acccgctggg tgcacgctga
     6421 aggtctcgac atcatcgctg cccactatgt gcccagcctt catacggtcg agctgaagcc
     6481 ctgggcgcgc cggggcggca agggcgtctt catcaaccac gaagcctcgc ggacctcgaa
     6541 cgactgctat gtgtgcgaga tccctgcggc gcagaagctt gagccgcagc gccagctgtt
     6601 cgaggaaatg atcctggtgc tcgatggtcg cggctcgacc acggtgtgga acgatgccgg
     6661 caaccgcatc accttcgagt ggaaggccgg cgcgttgttc gcggtcccgc tcaacacctg
     6721 gcaccagcat ttcaacggct ctggccgcga acccgtccgc tatgtggccg tcaccaacgc
     6781 gccgccggta atcaaccttt atgaggacat cgacttcgtg ttcggtacaa agcacgactt
     6841 ccgcgatcgc ttcaacggcg agcccgacta tttcagcgcc aagggcgagc agaagggcct
     6901 gctgttgcaa accaacttcg tcgccgatgc cgtcaacctg ccgctgatcg ccgcctagga
     6961 gcgcggcgcc ggcggcggcc atatccgttt caacatggcc aagggttcaa tgaacagcca
     7021 tatctcccag ttccctatcg gcacctacaa aaaggcgcac cgccacggac cgggcgccca
     7081 cgtgatcatc ctatcgggcg aaggctattc gctgatgtgg cctgagggcg atgcgccacg
     7141 cctctacgaa tggcaggtcg gttccatgat cgtgcctccc aatatgtggc tgcatcaaca
     7201 tttcaacacc ggcgccacgc cggcgcgtta cctcgccttc aagcatgagg tggtttcgat
     7261 ccgcaacgca cagggcgtgc ccaaggcctg gatcagccgc cggatcggtg gcgaccagat
     7321 cgactacgcg gatgaggcgc cggaaattcg ccggaaattc gtggaggcgt tggccaagaa
     7381 cagcctgaca ccgaagatgg aagccgccta cgaggcggaa ctcgccgatt tggcgccgct
     7441 gccggcaaaa tcggtggcgt gaggctttcc cagccgtgga actcgctgtt cctgacctgt
     7501 tggcaatctt ttccggttcc ttggtcggat tcattttggg tgtcatcggc ggcggtgggt
     7561 cgattctcgc ggtaccgctc ttggtttatg tagtgggggt gaaatcgcct catattgcca
     7621 tcggcaccag ttccatcgct gttgcgctga gtgcatcagc caacctcatc gatcacgcgc
     7681 gacgcgacca cgtgtgctgg ccggtggcga tcctgttcgc gatctccggg gtggcgggtg
     7741 cagcactcgg gtccacgctc ggcaaacaca cggatggcca gaagcttctc gtcctattcg
     7801 gtatcctgat ggtcgtggtc gccgtctccg tggcgctgaa acgggagggc ggcagcaaac
     7861 cgcaagtgct gctcgatcgc cgcaatgcgc cttggatcat tggcatcggc ttcgtggtcg
     7921 gcgggctgtc gggatttttt gggatcggcg gcggcttcct ggtggtgcca ggcctcgtca
     7981 ccgccacctc gatggccatg atcgtagcca tcggctcctc gctggtttcg gtgacggcgt
     8041 tcggcctcac caccgcggcg aattacgcgc tgtcgggcct gatcgactgg cggctggtcc
     8101 tgctgttcgt cggtggtggc attgcgggcg ggctcgtggg cggccggctc gcgacaaggc
     8161 tggcgagcca acagcgcgcg ctgtcgatgg tgttcgcggt cgtggtcgcc gctgtcgggg
     8221 tatatgtgat agtgcggggg gtggcgaaat tgcacggatg acacggtcat tccggggcgc
     8281 cgcgaagcgg cgagccgaaa ccataatcct cgtcagaggt tgtgggttag cgcaagcacg
     8341 cgccccggag acaattcccg tttcactcct ttacgttccg gacttccgtg ttcatacgca
     8401 catccttgcg ccggcgcttg gcgagttgct tgccggtagc gaaatagtcg ccgctggtag
     8461 cacgcgttgc tgcggcgtcg agttcctccg accattcgcc aagcgaatag ccataccagg
     8521 gctgctgcgg cttgagcttg ggcaatccca gctcctccca gattttcctg gcgttctcca
     8581 tgtattcgcg cttcggcagg gagatcggtg gaaaattctc tttcaacgtg gcgtcgatca
     8641 gcactgaggc atcctcgccg ttgttgcgtt tgctgcgcgg gccgtgcccc tggtcgcggt
     8701 ggggcagcag atgcatgtcg agggtcgggt tggcccggta tgacattgcc cacaggatgg
     8761 cgtcggcatt ctccggatcg atgtcgtcgt tgaccgcgat gacgtacttg ccggcggcgc
     8821 gatgcaggat cgcggcgccg tagagggcgc gccacagctc ggtcggcgcg atatcgcgct
     8881 cgaccacgag tgcaatcacc ttgcggatat tggtcagcgg ctcgtgcatg gagacgcgct
     8941 tgatgccctt gatgcccagc gtattgcgca ggaaattgag aaacagcggc tccattccga
     9001 tgcgcttgat caggctcgat tcgctcggcg tcacttgcga gatgatcgag gtcaggatgg
     9061 cgtcgcaccg ccgcgtgatg caggtcacat ccatataggc gttgaattcc tgcagattga
     9121 cgtggccgtg ggattctccg aacggcgcct cgggctccag atattcggtg tcgatgagtc
     9181 cctcgatgac gatctcggcc tccgccggca cgaggagatc aaccgtcttg gccttgacca
     9241 cgttgatcgg cgcgccgacc agcgcaccgg cgacgtggag ctcatcgagc gtctccggca
     9301 gcttctgcac cgaggcgaag gtgacgcagg gcggcgcgcc cagtaccacc gcacacggca
     9361 gcttcttgaa gccgcgggcg cgc
//
LOCUS       DATILV010000430         2628 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4189299, whole genome shotgun sequence.
ACCESSION   DATILV010000430 DATILV010000000
VERSION     DATILV010000430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2628)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2628)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2628
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4189299"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..222)
                     /locus_tag="VLJ17_09785"
     CDS             complement(<1..222)
                     /locus_tag="VLJ17_09785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23308.1"
                     /translation="MEAESGRRSDRPELVNALVNDRDYQDRGHRKRGASADALEISPD
                     CTLASWPADPIRTGNLMRALIAALLLAMVE"
     gene            complement(340..540)
                     /locus_tag="VLJ17_09790"
     CDS             complement(340..540)
                     /locus_tag="VLJ17_09790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008875731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dodecin family protein"
                     /protein_id="HSV23309.1"
                     /translation="MAVARVSKITASSTKGFQEAAEEGLKRATTTLRGVTGFEVSSLK
                     GKVENGKITEYRVTLEVTFILE"
     gene            794..1436
                     /locus_tag="VLJ17_09795"
                     /pseudo
     CDS             794..1436
                     /locus_tag="VLJ17_09795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643534.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
     gene            1845..2273
                     /locus_tag="VLJ17_09800"
     CDS             1845..2273
                     /locus_tag="VLJ17_09800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSV23310.1"
                     /translation="MSPSDLLAKAILSMRSDAIVATDCDGIIRSWNPGAERIFGYSTD
                     DAIGCSLDLIIPERLRQRHWEGFRQTIESGKSRYGDGDLLSVPALRKDGTTISIEFTI
                     VLLQSDSGQILGMAALLRDVTKRFEEMRSLKRKLADAAGS"
     gene            complement(2268..>2628)
                     /locus_tag="VLJ17_09805"
     CDS             complement(2268..>2628)
                     /locus_tag="VLJ17_09805"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HSV23311.1"
                     /translation="KPIIQIGRLLFNETTSEVRANGQLLGLRAAERRLLGMLMRQAEH
                     IVPKASIEERFSEFGRELSGNAIEAHVSRLRKALDEAHCGVIIETIRGVGYALKGASG
                     MMPDCARAKSRTSSVSS"
BASE COUNT          556 a          803 c          741 g          528 t
ORIGIN      
        1 ctcgaccatc gccaacaaca acgccgcaat gagagcgcgc ataagattcc cagttctaat
       61 tggatccgcc ggccatgaag ccaacgtgca gtccggcgat atctccagcg catcggcgga
      121 cgcaccgcgt ttgcggtggc cgcgatcctg atagtcgcga tcgttgacta gcgcattgac
      181 tagctccgga cgatccgacc gccggccgct ctcagcttcc acggactcat ccacgatccg
      241 ccactgcaga cagaccgatg tttgacgccg tgatccgtgg catatcggat tacggcaaat
      301 ccgtggtccc gcccaatcgg ccagccattg ttaaaatcat cattccaaaa tgaacgtgac
      361 ctccaacgtc acacgatatt cggtgatctt accattctcc actttgccct tcagcgagct
      421 cacttcaaaa cctgtgactc cacgcagtgt cgtggtggca cgcttcaggc cctcctccgc
      481 cgcctcttgg aatcccttcg tggacgatgc ggtaatcttg ctcaccctag cgactgccat
      541 gacatgtctc ctcacacaat tttcaacata ggccccgcgt attcgctacc cagcggtgcc
      601 gctcgtgaca agcaagctcg tctaggttcc ggcgagctgc tcaatggctt tcatcaccgt
      661 aacgctctgg ttcgtcttgt agaattgcac gagtttccgc gtgttttcag cagaaagctt
      721 ctatttatca cggtcctacc gctcttgccg tggtagtatc gactgagcca cgcgtcgatg
      781 cccacgaact gtgcagcagg acgagttcgc ggtcaaatcg cagaataagg cccgaggcgg
      841 cgatgaaggc gggccggttc aaggatgaaa tcgcgcccgt gaccgtcaag tcgcgcaggg
      901 cgatgtggtg gtggataccg acgaatatcc aaaggccgtc actgtagacg caatcgcgaa
      961 gctgcgacct gctttcgaca aggagggtac cgtgactgcc gccaacgcct ccggcattaa
     1021 cgatggcgtg gccgcggtgg tgctcatgcg cgcgagcgag gcgcagaagc gcggcaaggc
     1081 gctgcttgcg cgcatcgtgt catgggcaca tgcaggcgtc gatcccgcga tcatgggcac
     1141 cggaccgatc ccggcctcgc gcgcggcgct caataaggcc ggttggcaaa tcggagatct
     1201 gaccggatcg aagccaacga ggcgtttgct gcgcgggcct gcgcggtgaa caaggacctc
     1261 ggctgggaca catcgaaggt caacgtcaac ggcggtgcga tcgcgatcgg ccatccaatc
     1321 gccgcctcgg gcgccagaca ctgctctacg ggatgccgaa gcgtaacgcg aaaaagggcc
     1381 tcgccacgct ctgcatcggc ggcggcaagg cgatcgccat gtgcgtggag cgctgagaca
     1441 tcgacggatt tattctgata atccgcgccg cctcatctcc tgcccccaga cgcaggagaa
     1501 ggcagcgcag tagcaaagac aatcacccga acgaggttgg aaatcggcct cgggcacagg
     1561 tcactgagcg accggtcccg gaggggacaa cagcgccgga gggccgctca gggccttgtg
     1621 tcacgagcat cgctcggttc aaacggcaat gcgtaactgt aaaagagacg aaggaggccc
     1681 ttcgggtttg gcgatcaggt agctgatccc aagccaccgc aagctgctgc ggtcaaaagc
     1741 cgtggtggtg agcgttgcgc gggcaaccgc cagccatgtt cagtttgcgg gagggacagc
     1801 tatcgtcgaa acatctcccc gtgtgggtat ctgcgaggcc tataatgagc ccctccgatc
     1861 tgctcgccaa agccatctta tcaatgcgct cggatgcaat cgtcgcaacc gactgcgatg
     1921 gtatcattcg ctcctggaat cccggcgctg aacgcatttt cggttactcc accgatgacg
     1981 cgatcggctg ttctcttgac ttgattattc ctgagcgttt gcgtcagcgt cattgggaag
     2041 gattccggca gaccatcgag agcggaaaaa gtcgatatgg tgatggtgac ctcctttcgg
     2101 ttccggcact tcgcaaggat ggcaccacaa tctcaatcga atttaccatt gtgttgctgc
     2161 aaagtgactc gggacaaata ctcggcatgg cggcactcct ccgcgatgtc acaaagcgtt
     2221 tcgaggaaat gcgcagtctg aaacgcaagc tagccgacgc cgccggctca tgaggatacg
     2281 gaagacgtcc tacttttcgc ccgcgcgcaa tcaggcatca ttcccgaagc cccctttagg
     2341 gcatagccga ctcctctgat cgtctcgatg atgacaccac agtgcgcctc gtccagcgcc
     2401 ttgcgcaatc gagatacatg cgcttcaatc gcgttgccag acagttctcg cccgaattcg
     2461 gaaaagcgct cctcgatgct ggcttttgga acaatgtgct ccgcttggcg catcaacatt
     2521 cctagcagcc gcctttcagc agcacgcaac ccaagaagct gcccattggc gcggacctcg
     2581 cttgtcgtct cgttgaacag cagacggccg atttggatga tcggcttg
//
LOCUS       DATILV010000431         2844 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4445960, whole genome shotgun sequence.
ACCESSION   DATILV010000431 DATILV010000000
VERSION     DATILV010000431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2844)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2844)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2844
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4445960"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..576)
                     /locus_tag="VLJ17_09810"
     CDS             complement(<1..576)
                     /locus_tag="VLJ17_09810"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HSV23312.1"
                     /translation="MPATQTSPSLVRISGSTFSLRVLAAAIILLFCYYAQGVVITLLL
                     SILLAYFLDPAVELLERVHVPRTIGAMTMVLILIAVLVAVGYGLGERTADFAANWPKY
                     GGLLKQAASTVEGKISGFEGRVTDIGPEAANAVRSEVRTEPGVLRTLILRGIGSLYAL
                     FLEVTFVPFLVFFMLAGKREVWHGTLQLFPVS"
     gene            726..1148
                     /locus_tag="VLJ17_09815"
     CDS             726..1148
                     /locus_tag="VLJ17_09815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23313.1"
                     /translation="MSIRIVPDENQPSASIEIALDKPLPDYDLEQPDQPTPRDVDAIL
                     VSQGFRDLVDDTRGILMELLSQHTAHHPGLDLVSDSPLELAQLTGAICPGNDEVYRPG
                     LWIVLQDPHAKPKTALPSATRQRVAAIAAELAKRLQLD"
     gene            1267..1818
                     /gene="cobO"
                     /locus_tag="VLJ17_09820"
                     /pseudo
     CDS             1267..1818
                     /gene="cobO"
                     /locus_tag="VLJ17_09820"
                     /inference="COORDINATES: protein motif:HMM:NF004637.0"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
     gene            1870..2718
                     /gene="accD"
                     /locus_tag="VLJ17_09825"
     CDS             1870..2718
                     /gene="accD"
                     /locus_tag="VLJ17_09825"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HSV23314.1"
                     /translation="MTWFKRDKKSIDQATPPEERRVRTEGLWVKCESCRTIVFRKDLE
                     ANLLVCPKCQFHFKMGAKQRLEMLLDGRWTEHDARMTSTDPLRFVDTKPYASRLREAR
                     KKLGMCDAIITVEGQLNGRPIVCCAMEFNFIGGSMGAVVGEKVTRGIELALETRQPLV
                     IVSCSGGARMMEGTISLMQLAKVSAALAKLDEAKVPYISVMTDPTTGGVTASFAMLGD
                     LNIAEPGALIGFAGPRVIEQTIRQKLPEGFQRSEFLLEHGFLDAVVPRKEMKSFIANS
                     FDLLLS"
BASE COUNT          612 a          864 c          828 g          540 t
ORIGIN      
        1 cgacactgga aacagttgca gtgtcccgtg ccacacctcg cgtttgccgg ccagcatgaa
       61 aaacaccaga aacggcacga aggttacttc cagaaataac gcatataagg acccgatgcc
      121 ccgcagtatc aacgtgcgca acacgcctgg ctccgtacgt acttccgagc gcacggcgtt
      181 cgctgcctcc ggcccgatgt ccgtcacgcg cccctcgaag ccgctgattt tgccttccac
      241 cgtgctcgct gcttgcttca gcaagccgcc atatttcggc cagttcgccg caaaatccgc
      301 ggtgcgttcg ccaagtccat aaccgaccgc gacgagcacc gcgatgagaa tcagcaccat
      361 agtcatcgcg ccaatggtgc gtggcacatg cacgcgttcc aggagttcga ccgccggatc
      421 cagaaaatac gcgagcaaga tcgagagcag cagcgtaatg acaacgccct gcgcgtagta
      481 gcagaagagc agaatgatgg ccgcggcgag cacgcgcaga ctgaaggtag acccgctgat
      541 gcgcacaagg cttggcgacg tttgggttgc cggcacgtgg actccgttcc taccccactc
      601 aatgccccac aaaaatagca cactaccgca agcgccatcg tccgcggcgg cggttgtttc
      661 gttggcacca ccggtagcgc caccctatcg caattaccgg ctgctggtgt acaaacataa
      721 tcaccatgtc tatccgcatc gtgccggacg aaaaccagcc ttcggcctcc attgagatcg
      781 ccctggacaa gcccctgccc gattatgacc ttgaacaacc ggaccagccc acgccccggg
      841 acgtggacgc tattctggtc tcgcagggct ttcgcgatct cgtcgacgac acgcgcggca
      901 ttttgatgga gctgctgtcc caacatactg cgcaccaccc gggactcgat ctcgtttcgg
      961 actctccact tgaactcgcc caactaaccg gcgcaatttg tcccggcaat gatgaggtct
     1021 accggccagg cctgtggatt gttttgcagg atccgcacgc caagcccaaa accgcgctgc
     1081 cctccgcgac caggcaacgc gtcgccgcta tcgccgcgga attagccaag cggctccaac
     1141 tcgactgaga agcggttgat ttgcagattg ccattcgcgg cggtattgtt ccgtcgtgcg
     1201 cgcgatgaac cgcgtgccgc tgcattggcg gtcaattggg ttcgcgccta atcagagaaa
     1261 gccgatcgcg caacgaggga tatgccggaa gaaaaggggc tgttgatcgt ttacaccggg
     1321 ccgggcaaag gcaagacgac ctgcgcgctg ggcaccgcat ttcgcgccgt cggccaaggg
     1381 ttgcgggtgc tcatggtgca attcatcaaa ggctcctggc actacgggga gctggatgcc
     1441 gccaagatgc tgggcgacga caagtttgag attcggccga tgggccgcgg attcgtgaaa
     1501 gtgggcggcg cggaaacgga tcctgcggac atcaagctgg cgcacgactg ctggcagacc
     1561 ggccgcgacg ccatttacag cggcaaatac gatgtagtcg tactcgacga gatcaactac
     1621 acgatcggct ataaaatgct ggatgcggac gaggtggtag aggcgttgcg caagcggccg
     1681 gagcgggtac acgtgatttg caccggcagg aacgcgcatc cgaagctggt ggaactggcc
     1741 gacctggtca ccgagatgcg cgaggtgaaa cacccatata cgaggggtat actggctcaa
     1801 cgagggatcg actactgatt tggttggttt ttctctttca acctcgaatc gtcgaattaa
     1861 gttcctaaaa tgacttggtt taaacgcgac aaaaaatcga ttgatcaggc cacaccaccg
     1921 gaagaacgcc gcgtgcgcac ggaaggcctg tgggtcaagt gcgaatcctg ccgcaccatc
     1981 gtgtttcgca aagacctcga agccaatctt ctggtgtgcc ccaaatgcca gtttcatttc
     2041 aagatggggg caaagcagcg cctggaaatg ctcctcgacg gccgctggac cgaacatgac
     2101 gcgcgcatga cctcgacgga cccgctccgc ttcgtggaca ccaagcccta tgcgtcgcgc
     2161 ctgcgcgaag cacgcaagaa attgggcatg tgcgacgcca tcattaccgt ggagggccag
     2221 ctcaacggcc ggcccatcgt gtgctgtgct atggagttca atttcattgg cgggtctatg
     2281 ggcgcggtag tcggagagaa ggtcacccgc ggcattgaat tggctctcga gacgcggcag
     2341 ccgctggtga tcgtctcctg ctccggcggc gcgcgcatga tggaaggcac tatcagcctg
     2401 atgcagttgg ccaaagtttc cgcagcgctt gccaagcttg acgaagcgaa agtgccgtat
     2461 atctccgtga tgaccgatcc cacgacgggc ggcgtcaccg caagctttgc catgctcggc
     2521 gacctcaaca tcgccgaacc cggcgcgctg atcggctttg ccgggccgcg cgtcatcgag
     2581 cagaccatcc gccaaaagct gcccgaaggg tttcagcgct cggagttttt gttggagcac
     2641 ggcttcctcg acgccgtggt tccccgcaaa gagatgaaaa gcttcatcgc caattccttc
     2701 gacctgttgt tgagctgaaa tgaattacga cgccgcggtg cggtacttgc tctctctcgg
     2761 cagggaattg gctgctccga cgcaggcggc ggccgcaaaa tttgatcttg aaaacatcac
     2821 cgtgttgtcc gagcgcctgg gccg
//
LOCUS       DATILV010000432         4957 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1382847, whole genome shotgun sequence.
ACCESSION   DATILV010000432 DATILV010000000
VERSION     DATILV010000432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4957)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4957)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4957
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1382847"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..891
                     /locus_tag="VLJ17_09830"
     CDS             <1..891
                     /locus_tag="VLJ17_09830"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV23315.1"
                     /translation="LPGFSAALAASLVARAEAKNLSCETAVAADLPEYVRGDAVRLRT
                     ALENLMANAVKFTERGQVGLRVEAAPRPRGKLQLVFTVTDSGIGMSAAEIQRLFRPFA
                     QANREIAQKFGGSGLGLVQVQRLAQAMHGNLEVESVPGRGSIFRLTVMGDRAAPRETR
                     LGAVATTKHNDKEGRALNILCVEDNPYGRVVMNAILTELGHRVDFAGSGETAVEAVSR
                     GGPDVVLIDITLAGIDGFEATRRIRALPGAAATMPVIGISGHTGASDAEAAIAAGMNA
                     YLTKPVSPRVLADALASVHG"
     gene            complement(1060..1680)
                     /locus_tag="VLJ17_09835"
     CDS             complement(1060..1680)
                     /locus_tag="VLJ17_09835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012253732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxychromene-2-carboxylate isomerase"
                     /protein_id="HSV23316.1"
                     /translation="MKPSLTFWYEFASTYSWLAAERIEPLAAQAGIEVAWRPFLLGPI
                     FAAQGWTSSPFNLFPAKGRNMWRDMERQCARMGLPPIVRPDPFPQNSLLAARVATALS
                     ATMRPQFSRAVYRAGFALGHAIADSAVLAAILDDISGAPLDALAAAAAAETKDALRRV
                     TDQAQSLGIYGAPSFTTASGELFWGNDRLEQAIEWAKNEIIVPDAH"
     gene            complement(1677..2504)
                     /locus_tag="VLJ17_09840"
     CDS             complement(1677..2504)
                     /locus_tag="VLJ17_09840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV23317.1"
                     /translation="MAGIDYETEYDNRARVPEHPQIFARWATDSQSYRARLPAARQAR
                     MSYGPTAREIIDLFDVGPDAALAVFIHGGWWRNFEPSLFSHFAAGLNAHGVGVALPGY
                     NLCPRVSIAEIIEEMRRALLALWHRYGKRMLVTGHSAGGHLTAVLLATDWPSLDANAP
                     ADLVSAGYAISGVYDLVPLVHVSMNQDFRLDDDRARQVSPVLWPPPLGRALDAVVGAR
                     ESSEFLRQSRIIAEAWGKAGVATRYEKIAGANHFTVLDPLTDPNSAMVARLLALMPA"
     gene            2623..3099
                     /locus_tag="VLJ17_09845"
     CDS             2623..3099
                     /locus_tag="VLJ17_09845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009796457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcB family DNA repair protein"
                     /protein_id="HSV23318.1"
                     /translation="MVSPSTAPLDRRQSPTALAVARGTQRLLLTLGLSCVAELPLLSG
                     RRADLVAIGGDGEIWIVEIKSSVEDFRTDQKWADYRMHCDRLFFATAAHVPLDIFPAD
                     AGLILADGYGAELLREAPEHRLHAATRKSVTLAFARAAAVRLQALCDPQGPYGSEI"
     gene            complement(3243..4466)
                     /locus_tag="VLJ17_09850"
     CDS             complement(3243..4466)
                     /locus_tag="VLJ17_09850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019171583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HSV23319.1"
                     /translation="MRILRLIPVFAAALASLAVNQISARGEERKSVRVGYALSLTGVN
                     VGGAGALVRPNYRMWVAEVNDAGGIVLSRIGKRLPIEIIEYDDESTAEGAIRGVHRLI
                     NEDKVDFILPPWGTGLNLAVAPQLNAAGYPDIVTTALVDHVPDLVKRWPNSFWLLGTA
                     SDNVHALAQILSDLREQSKVGSRIAMANVADQFGIDLSKTARSAFRRAKFELAFDRPY
                     PVGMADMRPVLTEIMKTDADIFVAFSYPPDTLMLTAQSIELNFNPKVFFAGVGTAFPL
                     FRDKFGAKVEGVMGMGGWHGDAPESRSYLRRHVAMFGQEPDRWASPATYAGLQMLQQA
                     IEHVGDIDRASVIRELQSGTFQTILGTVKLQNNLYKGGYGVGQWQGGEFYGIAPGTLP
                     GAREVEFPKPNWSSK"
     gene            4765..>4957
                     /locus_tag="VLJ17_09855"
     CDS             4765..>4957
                     /locus_tag="VLJ17_09855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23320.1"
                     /translation="MSGGLARPIYSMEPSDFTLRTNPAFRSILGRLASKLQIPALFAA
                     AALVLIAGIAGILKLAVDDL"
BASE COUNT          938 a         1537 c         1525 g          957 t
ORIGIN      
        1 ctcccgggtt tttcggccgc gctcgcagcc tccctggtgg cgcgtgccga agcgaaaaac
       61 ctcagctgcg aaaccgccgt cgctgcggac ctgccggagt atgtgcgcgg cgacgccgtg
      121 cgactgcgca ccgcgctcga aaacttgatg gccaatgcgg tgaaattcac cgagcgcggc
      181 caggtcggac tgagagtcga ggccgcgccg cgcccacgcg gcaagcttca actcgtcttc
      241 acggtcaccg acagcggtat cggcatgagc gccgccgaaa tccaacggct gtttcgtccc
      301 ttcgcccagg cgaaccgcga aatcgcccag aaattcggcg gctcgggcct cggtctcgtg
      361 caggtgcagc ggctggcgca agctatgcac ggcaatctcg aggtcgagag cgtgccgggg
      421 cgcggctcga tatttcggct caccgtcatg ggcgatcgcg cggctccgcg cgagacccgc
      481 ctgggagcgg tcgcgaccac gaaacataat gataaggagg ggcgtgcctt gaacatcctg
      541 tgcgtcgagg acaatcccta tggccgtgtg gtcatgaatg caatcctcac agagctcggc
      601 catcgcgtcg attttgcggg cagcggcgag accgctgtgg aagcggtgtc gcgcggcggc
      661 ccggatgtgg tgctgatcga cattacgctc gccggcatcg atggatttga agccacgcga
      721 cgcatccgtg ccctgcccgg ggctgccgca acgatgcccg tcatcggcat ctcgggccac
      781 accggggcga gcgatgccga agccgccatc gcggcgggca tgaatgccta tctgacaaag
      841 ccggtgagcc cgcgcgtcct ggcggatgcc ctggcgagcg tgcatgggtg aagttgatcc
      901 ggtttcggga catttggctc cacagcgtcc gtcgggaagc aaagtgcatc gcgctgtcat
      961 gcccaaaaag gccggggcat cctgtgccct aatcgaaatc acgttgctac cggatcgcgc
     1021 gctttcgcgg gcgatgtcag ggtcgtgcta agttggcgcc taatgggcgt ccggcacgat
     1081 gatttcgttc ttggcccatt cgatcgcctg ctccaaccgg tcatttcccc agaacaattc
     1141 gcctgatgca gtggtgaagc tcggcgcgcc gtaaatgccg agcgattgag cctggtcggt
     1201 cacccggcgc agagcgtcct tggtctccgc ggcggccgcc gccgcgagcg cgtcgagcgg
     1261 ggccccgctg atgtcgtcga ggatcgcggc cagcaccgcg ctgtctgcga tcgcgtggcc
     1321 gagcgcgaac cctgcccggt acacagcgcg ggaaaattgc gggcgcatgg tcgccgacag
     1381 agcggtcgcg acacgggcgg ccagcaggct gttttgcggg aacggatccg gccgcacgat
     1441 cggcggcagg cccatgcggg cgcattgccg ctccatgtcg cgccacatgt tgcggccttt
     1501 agcgggaaag agattgaacg gagaactggt ccagccctgg gcggcgaaga tggggcccag
     1561 caggaagggg cgccacgcaa cctcaattcc cgcttgcgct gccagcggct cgatgcgctc
     1621 ggccgcaagc cacgaatagg tcgaggcgaa ttcgtaccag aaagtcaacg atggcttcat
     1681 gccggcatca acgcgagaag acgcgccacc atggcactgt ttggatcggt gagggggtcg
     1741 agcaccgtga aatgattggc accggcgatc ttttcgtagc gtgtcgcaac gccggccttg
     1801 ccccaggcct ccgcgatgat gcggctctgg cgcaagaatt cagacgactc gcgcgccccc
     1861 accacggcat cgagcgcacg gccgagcggt ggcggccata acactggcga gacttgtctg
     1921 gcgcggtcgt cgtctagacg aaaatcctga ttcatggaca cgtgcaccaa tggtacgagg
     1981 tcgtacacac cagaaatcgc gtacccggcc gataccagat cggccggcgc gttggcatcg
     2041 agcgacggcc agtcggtcgc caacagcaca gcggtcaagt ggccgccagc cgagtggccg
     2101 gtcaccaaca tgcgcttgcc gtagcggtgc cacagggcca gaagtgcacg gcgcatttcc
     2161 tcgatgatct ccgcgatgct gacccgcggg cagagattgt atcctggtag cgcgacgccg
     2221 acgccgtgtg cgttaaggcc cgccgcaaag tggctgaaca acgacggctc gaaattgcgc
     2281 caccacccgc catggataaa cacggccagc gctgcatcgg ggccgacgtc gaacagatcg
     2341 atgatctcgc gggccgtcgg gccgtagctc atccgcgctt ggcgcgctgc gggcaatctg
     2401 gcccgatagg attgcgagtc tgtcgcccat cgagcgaaga tctgcgggtg ctcgggcacc
     2461 cgcgcccgat tgtcgtattc ggtttcgtaa tcgatcccag ccatcgccat gctcccctgc
     2521 gccgcacagt gcggcaaggc gcggtggccg gcaaggggcg tacgccgcca atccaagctg
     2581 gtgtcaaact tagcgaggaa atgctctaat ggcataatgt caatggtttc accgtccacc
     2641 gcaccactcg atcgccgtca atcgccgacc gcacttgcgg ttgcgcgcgg aacgcagcgc
     2701 ttgctgctga cgcttggcct gtcatgcgtc gccgaactgc cgctgctgtc cggacgccgc
     2761 gccgacctcg tggcgatcgg cggcgacggc gaaatctgga ttgtggagat caagtcctcg
     2821 gtcgaagatt ttcgcaccga tcaaaaatgg gccgactatc gcatgcattg cgaccgccta
     2881 ttcttcgcaa ccgccgcgca tgtgccgctc gacatctttc ccgccgacgc cggcctcatc
     2941 ctcgctgacg gctatggggc ggagctgttg cgcgaggccc cggagcatcg gctgcacgcc
     3001 gccacccgca agagcgtcac gctggccttc gcgcgcgctg ccgcggtgcg gctgcaggcg
     3061 ctgtgcgacc cgcaaggacc ttatgggagc gaaatctgaa gaagcgagag acgtgaacgg
     3121 cctcaccatg cctcgcccag cgccgccatg acgatgttga taagcagcgg gccgctggta
     3181 tttgcggcgt tcgtttcgta gccgcgctca cggctgcgaa gcgcaaagcc gttgtcgcaa
     3241 gattacttgc tggaccaatt gggcttcgga aattcaacct cccgcgcccc cggtaacgtg
     3301 cccggggcaa tgccgtaaaa ctcaccgccc tgccactgac ccactccata tcctccctta
     3361 tagagattgt tttgaagttt cacagttccg aggatggtct gaaaagttcc gctctgcagt
     3421 tccctgatca ctgaggcgcg gtcgatgtcg ccaacatgct cgatcgcctg ctgcagcatc
     3481 tgcagtcccg cgtaggtagc ggggctcgcc cagcgatccg gctcctggcc gaacattgcg
     3541 acatggcgac gaagatagct gcggctctcg ggtgcatcgc cgtgccagcc acccattccc
     3601 attacgcctt cgacctttgc gccaaacttg tcgcggaaaa gtgggaaggc agtgccgacg
     3661 ccggcgaaaa agaccttcgg gttgaagttt aattcaatgg attgcgcggt gagcatcagc
     3721 gtgtcgggcg gatagctgaa ggcaacgaag atatccgcgt cggttttcat aatctcggtt
     3781 agaaccggac gcatgtccgc cattccgacc gggtagggtc gatcgaacgc cagttcgaat
     3841 ttcgctcttc taaacgcgct acgggcggtc ttcgataggt cgattccgaa ttgatctgcg
     3901 acgttcgcca tcgcgatacg gctgccgacc ttgctttgct cccgcaagtc gctcaggatc
     3961 tgtgccaggg catgcacatt gtcgcttgcc gttcccaata accaaaagct gttcggccac
     4021 cgcttgacca aatctggcac gtggtccacc agtgcggttg tcacaatatc gggatagccc
     4081 gctgcgttga gctgcggagc aaccgccaga ttgaggccgg ttccccatgg cggtaaaatg
     4141 aaatcgacct tgtcttcatt gatgagccgg tgaacacctc ggatggcacc ttcggcggtg
     4201 ctctcgtcgt cgtactcgat gatttcgatt gggagacgtt taccaattcg gctgagcacg
     4261 attccgccag cgtcattcac ctcggcgacc cacatgcgat agttaggacg cacaagagcg
     4321 cccgcgccgc ccacatttac gccggtcagc gataacgcgt agccgacacg aaccgattta
     4381 cgctcctcac cgcgggcgga aatttggttt accgctaggc tagcgagcgc tgccgcaaat
     4441 accgggatca aacgcaaaat tctcatggtc ttcgtcgccc tttgatgcag ttgagcaggc
     4501 agcccatacg agagccggca tgtgaagcga ggtcatctca gaccaacaag gtgctgttcg
     4561 tgaagcgcgc cgttcgtttc gctagcacag ccgaatttag taaacggata atgaagaaat
     4621 ggggtcattt tgccggtttt cgtcagtttg attgcgcttc cacaaagcat ttgactaaca
     4681 tcttatatac gcatttgagc atacatattt gagcacgcgt tttattaatc tggcacttgt
     4741 attggtgagg cagaggctcg tgttgtgagc ggcgggctgg cgcgaccgat ctattccatg
     4801 gagccttcgg atttcacctt gcgaacgaac ccagcatttc gaagcattct ggggcgcctt
     4861 gcgtctaagc ttcagattcc tgcactcttt gctgctgccg cgctggtgct tattgctggc
     4921 atcgcaggca tcctcaagct agccgtcgac gacttgc
//
LOCUS       DATILV010000433         5391 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2148461, whole genome shotgun sequence.
ACCESSION   DATILV010000433 DATILV010000000
VERSION     DATILV010000433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5391)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5391)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5391
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2148461"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(499..2523)
                     /locus_tag="VLJ17_09860"
     CDS             complement(499..2523)
                     /locus_tag="VLJ17_09860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl/propionyl/methylcrotonyl-CoA carboxylase
                     subunit alpha"
                     /protein_id="HSV23321.1"
                     /translation="MFKRILIANRGEIACRIIKTARRLGIETVAVYSDADKDALHVEM
                     ADTAVYIGPAPAAESYLVIDRIVAACQTSGAEAVHPGYGFLSEREAFPIALMKAGVVF
                     IGPNPTAIAAMGDKIESKKAAAAARVSTVPGHLGVIEDERQATRIADEIGYPVMIKAS
                     AGGGGKGMRVAHSRAEVAEGFARARSEAKSSFGDDRVFIEKFIIDPRHIEIQVLGDRH
                     GNVIHLGERECSIQRRNQKVIEESPSPLIDAATRERMGAQAVALAKAVGYDSAGTVEF
                     VAGQDKSFYFLEMNTRLQVEHPVTELVTGIDLVEQMIRVAAGEKLSIAQGDVKLSGSA
                     IESRIYAEDPYRNFLPSTGRLVKYRPPAEGVEGNVTVRNDTGVFEGGEISIYYDPMIA
                     KLVTHAPTREEAISAQARALDAFYIDGIRHNIPFLAALMQHPRWQAGKLSTGFIAEEF
                     PDGFTSQAPAGATAQAIAAVAAAVDHVLGERKRQISGQMTGRPVVRERLRSVWLGATE
                     IRLKVARESHGISVRLIGETQEGPGSVPVILLTSSWKPGEPVWHGIIEGVPVAVQVRP
                     ILNGFILFHRGIEARAFVYTDSESAAARLMPTRVAADTSKKLMCPMPGLVVSIAVTVG
                     QEVKAGETLAIVEAMKMENVLRAERDGTVKAVFAKKGDSLAVDAVILEFA"
     gene            complement(2622..3179)
                     /locus_tag="VLJ17_09865"
     CDS             complement(2622..3179)
                     /locus_tag="VLJ17_09865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23322.1"
                     /translation="MAAIEHSKIEVAELSAAALRDVLTGVITGEGPTIAGRIHFSRAL
                     DPGDAQLCARILTAAGGEAGAPVTRLEANLLFDIDAAAAERTDDGRFDDLLVKSVAHF
                     ALAQAGHIVPPRQVALDPATELSSWASRSTDIDGEILEWITSQARSKKRLKSTLMGLS
                     AFLTGIGATLSVAVPSLAVMVDLIV"
     gene            3823..4482
                     /locus_tag="VLJ17_09870"
     CDS             3823..4482
                     /locus_tag="VLJ17_09870"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HSV23323.1"
                     /translation="MTLQIGDTAPDFEADTTEGHIRFHDWIGDSWVILFSHPKDFTPV
                     CTTELGTMARLKPEFDKRNVKIVGLSVDPVANHTKWAVDIKDTTGFAPNYPMIGDTDL
                     KIAKAWGMLPAAASGDASQRTPADNQTVRNVFIIGPDKKIKLILVYPMTTGRNFDEVL
                     RVVDSLQMTAKHKVATPANWKQGEDVIIAGSVSDDDAKKMFPQGWKAPRPYLRIVPQP
                     H"
     gene            4940..>5391
                     /locus_tag="VLJ17_09875"
     CDS             4940..>5391
                     /locus_tag="VLJ17_09875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23324.1"
                     /translation="MRESFSGSMIPIAIAGATFSAIISASITHTSAQAPGASAKTLAP
                     ALKTPWGEPDLQGIWTDETDTALQRPAKYATQEFFTEAQRAELDAQRSALTGKDKRAE
                     RGTELDVTGSYNDVFISRKRTGMRTSRIVDPPNGRIPLLTPEAQKTAAA"
BASE COUNT         1075 a         1673 c         1632 g         1011 t
ORIGIN      
        1 tgaagagtcc agattttgta gccggggcgg agtgaagcga aatccgggaa gggtcatcgc
       61 ttaggacagc cgcaacaata agtgaatcgt attggcgacg ccaatgtagt gcgacggtgt
      121 gactcagtgc gggggcgatg ttgcaccgcg cggcgcgcta ccggcgtacg cgcaggcgat
      181 tcggcaacga tgagaggcgg acggttcgaa gtggaacgag cagggtcggc gcttgttcgc
      241 cgcgagcagg cacgcgccgc cggatggggt ggtctggctg ccgtctcaag catcacaggg
      301 ttggcgcgca gcaccattgg gcggggaaag agcttgatgc tccgctgctt acgcggtcct
      361 ccccgtatgc caaaatcata gagttactgt tgagggtgtc ctaagtagca ccgcaagggg
      421 ggcggggatg gccgctcccg gattacgtga ccgccgaggg cggtcgcgca atccggctac
      481 atactttcac acttggcgct acgcgaactc caggatcacg gcgtcgacag caaggctgtc
      541 gcctttttta gcaaacaccg ccttgacggt gccatcgcgc tcggcacgca gcacgttctc
      601 cattttcatc gcctcgacga tcgccaaggt ctcgcctgcc ttgacctcct gccccaccgt
      661 aacggcgatc gagacgacaa ggcctggcat cgggcacatg agcttcttgc tggtgtcggc
      721 cgcaaccctg gtgggcataa gccgcgccgc cgcagactcg ctatccgtat agacgaaggc
      781 cctggcctcg ataccgcgat ggaacaggat gaagccgttg aggatggggc gaacttgcac
      841 ggcgaccggc acgccctcga tgatgccatg ccataccggc tcgcccggct tccaggacga
      901 cgtgagcaat atcaccggca ccgatccggg cccttcctga gtctcgccga tgagccgcac
      961 gctgatgccg tgggattcgc gcgccacctt gaggcgaatc tcggtggcgc cgagccacac
     1021 cgaacgcagc cgctcacgca ccaccgggcg gcctgtcatt tggccggaaa tctgccgctt
     1081 gcgctcgccg agcacatggt cgaccgcggc ggcgaccgca gcgatcgcct gagctgtcgc
     1141 tcccgccggt gcctgggacg taaagccgtc gggaaattcc tctgcgatga agcccgttga
     1201 taatttgccg gcctgccagc ggggatgctg catcagggcg gcgaggaacg gaatattgtg
     1261 gcggataccg tcgatgtaga acgcatcgag ggcgcgcgcc tgcgcggaaa ttgcttcctc
     1321 acgcgtcggc gcgtgggtca cgagctttgc gatcatggga tcgtaataga tcgagatttc
     1381 accgccttcg aagacgccgg tatcgttgcg caccgtaacg ttaccctcga caccttccgc
     1441 cggaggacga tatttgacga gtcgcccggt cgaaggcagg aaattgcgat acgggtcctc
     1501 cgcataaatg cgagattcga tcgccgagcc gctgagcttc acgtcgccct gcgcaatgct
     1561 gagcttttcg ccggccgcaa cacggatcat ctgctccacc agatcgatgc cggtgacgag
     1621 ttcggtaacc gggtgctcga cctggagacg ggtgttcatt tccaggaaat agaaactctt
     1681 gtcctggccg gccacaaact ctacggtccc ggcggaatcg tagccgaccg cctttgcgag
     1741 cgcgaccgcc tgagctccca tccgctcgcg cgttgcggca tcgatgagcg ggcttggcga
     1801 ctcctcaatc actttctgat tgcggcgttg gatcgagcat tcgcgctcgc caagatgaat
     1861 cacgttgccg tgcctatcgc cgagcacctg aatttcgatg tggcggggat cgatgatgaa
     1921 cttctcgatg aacacgcggt cgtcgccgaa cgacgacttc gcctcggatc gtgcacgggc
     1981 gaaaccttcc gcgacctcgg cccttgagtg cgcaacgcgc atgcccttac cgccgcctcc
     2041 tgcggaggcc ttgatcatca ctgggtagcc gatctcgtcg gcgatgcgtg tggcctgccg
     2101 ttcatcctcg atgacgccga gatggccggg gacggtggaa acccttgccg cggctgctgc
     2161 cttcttgctc tcgatcttgt cgcccatggc ggcgatagcc gtggggttcg gaccgatgaa
     2221 gacgacgccg gctttcatca aggcgatcgg aaacgcttca cgctcggata ggaacccata
     2281 gcccggatgc accgcctcgg cgccgcttgt ctggcaagcg gctacgatcc tgtcgatgac
     2341 gaggtagctc tcggcagccg gagccgggcc gatatagacg gcggtatcag ccatttccac
     2401 atggagcgcg tccttgtcgg catcggaata gaccgcaacg gtctcaatcc ccagccgccg
     2461 cgcggtctta ataatgcgac aggcaatctc gccgcggttg gcgatcagaa tccgcttgaa
     2521 cattccgtct ccgcaacccg gccggttgaa tcacttgggc tttgcggcga acggcggcaa
     2581 atgtcaattc gacattcgcc ttcgggcgca atgggaatcg gttagacgat cagatcgacc
     2641 atcacggcaa gcgagggaac ggcgacggaa agcgtggccc cgatgccggt gaggaacgcc
     2701 gaaagcccca tcagggtcga cttcaggcgc tttttgctgc gcgcctgaga ggtgatccac
     2761 tccaggatct cgccgtcgat gtcggttgaa cggctggccc acgacgacag ctccgtggcc
     2821 ggatcaagag caacctgccg tggcggcaca atgtgacctg cctgggccag cgcgaaatga
     2881 gcgaccgatt tgaccaacag atcgtcgaag cggccatcgt cggtccgctc cgcagcggca
     2941 gcatcaatat cgaacagcag gttcgcctcg agtcgcgtga ctggcgcgcc ggcttcgccg
     3001 ccagctgccg tcagaatccg tgcgcacagc tgcgcatcgc cgggatcgag cgcgcgggag
     3061 aaatgtatgc gtcctgcgat ggtcgggcct tcgcccgtga tgacgcccgt cagcacatcg
     3121 cgaagcgccg ctgccgaaag ctccgcgacc tcgatcttgg agtgctcgat ggcagccatc
     3181 aagcgctgga aattgtggtc ctgttgcgcc gacaattgcg aaacgtcggt gagttcggcc
     3241 gaactcttat ccatggtact tttactccac gtcgctgaga tgcttaaagc gccccgtatg
     3301 aaccgctgat taatgacaga tgcacaactt cctcacgttc gccggttagg cagccaccgc
     3361 gggcaccaac tcccctatac gccgttcaac aaatgttgag agctgtcctg acgtgcacct
     3421 gcaccttagt cgcagccatc cctaattcgg ttcgatcgcc gactcgcctc gcagtagcaa
     3481 ggtgtcggtt ccaggctggt cgatcgtttc agtcaatctg aaagcatggc agcatcgtca
     3541 gacgcgatca cagcggattc gtaccgatgt aaagacgacg tgagagcacc ccttatggtc
     3601 gccctgcgcc ggcgcacgat gagaacccac agaggttgtc gccacagcgg ctttttcagc
     3661 gtcggccggc cgttgtaagc tacctatgcg ccgccccagt cggcgcgggc gcgtattatc
     3721 gccgcagagc aagttattta actgtcgtcg ccaagggcct atatgggggc ccattggttg
     3781 cccacaaggt gaccgcagca ttaaaaatgc ggaggtttac agatgactct tcagattggc
     3841 gacaccgccc cggatttcga agcagacacc accgaaggcc acatccgctt tcatgattgg
     3901 atcggcgatt cctgggtcat cctgttctcg caccctaagg atttcacgcc ggtctgtacc
     3961 accgagctcg gcaccatggc ccgcctcaag ccagagttcg acaaacgcaa tgtcaagatc
     4021 gtcggcctgt cggtggatcc ggtcgccaac cacaccaagt gggcggtcga catcaaggac
     4081 accacgggct ttgcgcccaa ctatccaatg atcggcgaca ccgatcttaa gatcgccaag
     4141 gcctggggca tgctaccggc cgccgcatcg ggcgacgcct cgcagcgcac cccggcggac
     4201 aatcagactg tgcgcaacgt cttcatcatc gggcccgaca agaagatcaa gctgatcctg
     4261 gtatacccga tgaccacagg acgcaatttc gacgaggtgt tacgcgtggt cgactccctg
     4321 caaatgaccg caaagcacaa ggtggcgacg ccggccaact ggaaacaggg cgaggacgtg
     4381 atcatcgccg gctcagtgag cgacgatgac gccaagaaga tgtttccgca aggctggaaa
     4441 gctccccgcc cttatttgcg cattgtgccg cagccgcact aagcgttgcc ggcgtcatgg
     4501 tgacagaaga ggcttcaagt cgaggctctc cgttcccaga gctgcagccc gggttgagcg
     4561 tcaagcgaat cccggggaag gcattgcggc attgatacgc cgatcccgga tttcgctggc
     4621 gctcaatcca cactacactt gctggtcaga cgatcggtgt gctcgggccg tgcagccggt
     4681 gaggcccgtg cgcaagctcg cttgccagca gacgaccttc ttggtcgggc tatcggcgaa
     4741 tgccgaaaaa cgctaccatc tacaccagca agcgtagcac ccgaagtccg ggttgagctg
     4801 ccagcaaaac gcgggagcgg cgttgccgca tggagaggct ggctcggatt tcacttcgtt
     4861 cgatctgagc tatcctttcg ctcagggttc ctcgggaagc acgtcgcagt accacactgc
     4921 aatacaagag gaggccatca tgcgcgagag cttctcaggc tcgatgatcc caatcgccat
     4981 tgccggggcg actttcagtg ccattatttc cgcgtccatt acacatacgt cggctcaggc
     5041 gccgggagct tccgctaaga cactagcccc ggcgctgaaa acgccatggg gcgaacccga
     5101 tctgcaaggc atctggactg acgaaaccga cacggccctg cagcgccccg ctaaatatgc
     5161 gacccaggaa tttttcaccg aggcgcagcg ggcagaattg gatgcgcagc ggtcggcact
     5221 gaccggcaag gacaagcgtg cggagcgcgg aactgaactc gacgtcaccg gctcttacaa
     5281 cgacgtcttc atttccagga agcgcaccgg tatgcgcacg tcgcggattg tggatccgcc
     5341 taatggccgg attccactgc tgacgcctga ggcgcagaag acggccgcgg c
//
LOCUS       DATILV010000434         5998 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3681407, whole genome shotgun sequence.
ACCESSION   DATILV010000434 DATILV010000000
VERSION     DATILV010000434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5998)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5998)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5998
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3681407"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..284)
                     /locus_tag="VLJ17_09880"
     CDS             complement(<1..284)
                     /locus_tag="VLJ17_09880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR family transcriptional regulator"
                     /protein_id="HSV23325.1"
                     /translation="MIDHKEIEPTALADSLDMLSPGIFLVEATGRIVHANLTGHTMLS
                     EANLVSGLGGKLGAVDPQANQALLDAYTAIGGPALGRKGIAVPLKARDGRR"
     gene            complement(290..529)
                     /locus_tag="VLJ17_09885"
     CDS             complement(290..529)
                     /locus_tag="VLJ17_09885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23326.1"
                     /translation="MSFDQREIGAVAPPLLVSTQLLSFIFEQDAVRQKVKESLMTIPE
                     YSVQEGSALNARDGLDDDKRWQFALVVPHLRRTLR"
     gene            1543..1983
                     /locus_tag="VLJ17_09890"
     CDS             1543..1983
                     /locus_tag="VLJ17_09890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HSV23327.1"
                     /translation="MAKAYHSTVFEQSADVIWKVIRDFNNYSVWVEGAGESHIEDGKT
                     GDTVGAVRNVLYNGSRIRQRLLAQSDVERAQTYEFCGVAPIAVRDYQATLRVTSIVDG
                     DRAFVEWWATFDCDTEKHDELTTFFQSSFANWLESLRQTLRGDR"
     gene            complement(2182..2709)
                     /locus_tag="VLJ17_09895"
     CDS             complement(2182..2709)
                     /locus_tag="VLJ17_09895"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HSV23328.1"
                     /translation="MAKYSLLIAEALGLDEEACRSLYLSCPMHDVGKIAIRDAILLKP
                     GKYSPEERAAMERHTIHGYEILANSNSTLIQTAAAIALSHHERWDGTGYPSRLCRTEI
                     PLFARITAVADVFDALTSERPYKRAWSLEEARLHILESSGKQFDPACVAAFMQRWDDV
                     LIIHGSHQSKSRAVA"
     gene            complement(2947..3243)
                     /locus_tag="VLJ17_09900"
                     /pseudo
     CDS             complement(2947..3243)
                     /locus_tag="VLJ17_09900"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
     gene            complement(3407..5791)
                     /locus_tag="VLJ17_09905"
     CDS             complement(3407..5791)
                     /locus_tag="VLJ17_09905"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV23329.1"
                     /translation="MQKINSALDTFFGNVKKATAPDNVKPDIILDLLEEFGDIQTNVA
                     EVVAAARAFNADQEQQESTKLVLLHVAFSGIVGLLIVFGGVMVFASARQNVRIRRSNF
                     ELNVITKNLTETTVSREYLYAAINNIPQALCMVDDFERIIIWNDQFVKLFGIKCKLVS
                     GISKFGDVISVDNVGNDTSSILEEIYQRLRSAAGEQLEGQFIRTTADKRIIESSLRLM
                     PSGWVVTFADITERKLIEEDKNRAFAEVDAARGRAAAAQAESRAKSAFLAMMSHEIRT
                     PMNAVIGLSSSLLEANLDQEQHYLARTIYDSSNSLLGLLNDILDISKLEEQKVEFEAI
                     AFSPASITADVMSIMGPKIEEKGLTLISTPDESVPQALLGDPTRIRQVLLNLVGNAAK
                     FTETGTVEVATRCLSRVSGMATIEFSVHDSGIGIPSDRLSGLFQYFTQADDSINRRFG
                     GTGLGLAISKRIIEQMGGEINVKSAPGVGSTFSFKITLPISDMALTELRNDAESAEPS
                     KRTLIALVQPLRILLAEDSTTNQLVVRKLLQEFKVQFTIANNGHEAVDLASSGTFDVI
                     FMDLRMPEMDGLEATRRIRAIGGALSSIPIIALTANAFAEDVNACRAAGMSDFVAKPI
                     RKNILVEKLAMAVADRLQPQEQTKATTVKSLRPKAPAQSHLPIIPPATVAMTDVASIL
                     NPTAFKQFVQEIGAEGARLILDVFFAETLARLELLRRLSHASDRDRIETEAHTVKGAS
                     GTFGLIQVSTLAATLEHGAHSVSADEYRELLDRLDASFKTARAEVENTLATVRA"
BASE COUNT         1280 a         1724 c         1690 g         1304 t
ORIGIN      
        1 cgcctgccgt cgcgcgcctt gagcggcacg gcgatgccct tgcggcctag cgccgggccg
       61 ccaattgcag tgtatgcgtc gagcaaggcc tggttcgcct gcggatcgac ggcgccgagt
      121 ttgccgccga gcccgctcac gaggttggct tccgacaaca tggtgtggcc ggtgagattg
      181 gcatggacga tgcgcccggt cgcttcgacc aggaaaatgc ccggcgagag catgtcgagg
      241 ctgtcggcga gtgccgtggg ctcgatctct ttgtggtcga tcatattgcc tatcggaggg
      301 tacggcgcag gtgcggcacc acgagtgcga actgccaacg cttgtcgtcg tcgagaccgt
      361 cgcgggcgtt cagcgcgctc ccttcctgaa ccgagtattc tgggattgtc atcagagact
      421 ccttgacctt ctggcggacc gcgtcttgct caaaaatgaa tgaaagcaat tgggtggaga
      481 caagcagggg aggagccacc gcgccgattt cacgttgatc gaagctcaca gcgatgatgt
      541 agaccgcaga ccttagggaa ggcaataata cttcctacgg aggaattggc acgcgacggg
      601 gccgtggaca gtccttgttg agcgagagat gtattccgtc atgatgatat tgaaatagtc
      661 gacaggacgc ggcgcaagtt gacgcttgct aagaaaagcg tgatctgggc attcccagcg
      721 gaccgaaccg atgagggagc tcgcaccctt cggagtgttg catgggcgac acaagtgtcg
      781 cacacccggc ggagaaaaac agctgctcgc ccgggcatcc ggttcggcgc gacaacgact
      841 gccgcagcgc aatcggggca gagcgcgttt tccgattcaa ctccggcggg aacatccgct
      901 agcgcctggc gccgcgcgcg tgcttctccc gccatttcgg gccggggccg cgcatatagt
      961 gtagctccgg cttatacggg tcgaatagac ttgcccccaa ccagcgccac cgccgagcgg
     1021 tcacgttgag gctgcgcgcc ggcgcaggga tcgcaagcaa cactctgcag acgtacgaat
     1081 ccgaaaacgc gcacatttcg aacctcccaa caaggagcgg cttcagccac ccctcccagg
     1141 tgcaaagcgg gaccgacgct accttttccg ccgcgatgcc tcctcggcgg ccttggtcgc
     1201 agccttcttg atcgcatgcc acgaatgata gttccaacga ccgatacgtc cattgtacgg
     1261 acgttgatcc gcccgatgtg ttggtttgag ccgctcatac ttaggttgag acctggctcg
     1321 ccaatcgtat gacatcgctg gcctcacgca gggcctaccg tgagggcaat ggcaaacgtg
     1381 tgccagatat cccgggcggg agggggcggc tcttcacgat gccgttatga gagctggttc
     1441 gcggaatgga cgagactggt cgtatccgga aatcgggtgg gagcgcccaa cactccccag
     1501 gtagacctcg cgaagcccta cacggcatcc gaggtgacaa aaatggcaaa ggcctatcac
     1561 agcacggtgt tcgagcaatc cgcagacgtg atctggaagg tcatccgcga tttcaacaat
     1621 tacagcgtct gggtcgaggg cgcgggcgaa agtcatatcg aggacggcaa aactggcgac
     1681 accgtcggag ccgtgcggaa cgttctctac aacggcagta gaattcggca gcgtctgttg
     1741 gcgcagtccg acgtcgagcg ggcccagacg tacgagtttt gcggcgtggc gccgatagcg
     1801 gtccgcgact atcaggcaac gctgcgcgta acgtcaatcg tggatggcga ccgcgcattt
     1861 gtcgaatggt gggcgacgtt cgattgcgac accgaaaagc acgacgagct gacgacgttt
     1921 ttccaaagct cctttgcgaa ctggctagag tctcttcgcc aaacgctcag gggagatcgt
     1981 tagaggggca ccggttttcc gcaaaaaaaa gcgatcaact acagaagcta gagtgcgttt
     2041 ccagattcga cttagactag ttgggacgcg ctctctggcc gccgcgggcg gcggacctcg
     2101 ccgttgacct ccgatacggt ttcatccgaa tcggccggcc acgctagcga ccgaaatggt
     2161 gcgggtcacc ctggctcgtt gtcaggccac cgcgcgcgac ttgctttggt ggctgccatg
     2221 gatgattagc acgtcatccc aacgttgcat gaaggccgct acgcaggccg gatcaaactg
     2281 cttgccgctg ctttccaaga tgtgcaaacg cgcttcctcg agcgaccatg cgcgcttgta
     2341 gggccgttca gaagtcaatg cgtcgaacac atcagcgacc gccgtgatcc gcgcaaagag
     2401 cggaatctcg gtgcggcaca agcgactagg atagcccgtt ccgtcccagc gttcgtgatg
     2461 cgacaatgcg atggcagctg cggtttgaat gagtgtggag ttgctgttgg ctagaatttc
     2521 atagccgtga atcgtgtgcc gctccatcgc cgctcgttcc tcgggagaat attttcctgg
     2581 tttcagcagg atcgcatcac ggatggcgat cttgcccaca tcgtgcatcg gacacgaaag
     2641 gtagaggctc cggcacgcct cttcatcaag acccagcgcc tcggcgatca gcaggctgta
     2701 cttggccatg cgctcaatat gctggcccgt atcgctatcg cgatattctg ccgctcgcga
     2761 gagccgaaaa atgacttcct cctcgcgcag tacgagcgcg gacgttgcct ttcttacttc
     2821 ttcggcaagc cacgaggcct tgtctctcaa attgttctgc gcttcgcgga gcttcaacat
     2881 atttctaatg cgcaatttca cctcgaccgt atcgaaaggc ttcgtcaaaa aatccgtcac
     2941 accggcatca agggcggcat accgaatcgc atcacggccg gtcaacatga cgacgggcag
     3001 atccgcgcct ccaggcatcg cgcggagcgt cttgacaaca tcgatcccat taaatcccgg
     3061 catcatgtag tcgacgagcg caagatcgat tgagccggcc cccacctccg aaagcgcttt
     3121 ggcagggtct gtgaaaggca gcgccgtgca gccttcaatt ttgctcacca gctgctctag
     3181 aagcatcaag ctgcttgcgc tgtcgtcgag aatgagaaca cgcatggctg cgccctgttc
     3241 catatttggt caccaagcta ccgccggatc tcttcgataa ccctaaagcg cgccgtcgta
     3301 ccgtgtctcg atcgccgggt gattaagaat gtcttaacgc cgagtctaat ctgcgctgtg
     3361 acttgataag accgggcgat cgtctacccc gtagatcgag cctgcatcaa gcgcgtacgg
     3421 tggccagcgt gttttcgact tcggcacgtg cggtcttgaa gctcgcgtcg agccggtcga
     3481 gcaactcgcg atattcgtcc gccgaaacgc tgtgggcgcc gtgttccagc gtggcggcca
     3541 gcgtcgacac ctggatcagg ccgaacgtgc cggacgcccc tttcaccgta tgggcctcgg
     3601 tttcgatcct gtcgcgatcg cttgcgtggg acaggcgacg caacagctcg agccgcgcga
     3661 gggtctccgc gaaaaatacg tcgaggatca aacgcgcgcc ctccgccccg atctcctgga
     3721 cgaattgctt gaatgctgtg ggattgagaa tcgacgccac atcggtcatg gcaacggtcg
     3781 ccggcggtat gatcgggaga tggctctgtg ccggcgcttt cggacgtaat gacttcacag
     3841 tcgtcgcctt cgtctgttct tgcggctgca aacgatcggc gacggccatc gccaacttct
     3901 cgaccaaaat atttttgcgg atcggtttgg cgacgaagtc gctcatcccg gcagcgcggc
     3961 acgcattgac gtcttcggcg aacgcgtttg cagtcagtgc gataattgga atactggata
     4021 gcgccccgcc gatggcgcgg attctacggg tcgcttcgag gccgtccatc tccggcatcc
     4081 gcaaatccat aaatatgacg tcgaatgtgc cactcgacgc caagtccacc gcttcgtgtc
     4141 cgttgttcgc aatcgtgaat tgcactttga attcctgtaa tagcttccgg acgacgagtt
     4201 gattggtagt gctgtcctcg gccagcaaga tgcgcaaggg ttgaaccaaa gcaatgagag
     4261 ttcgcttgga cggctcggcg ctctcggcgt cgttgcgaag ttcggtcaac gccatgtctg
     4321 aaatgggcaa tgtgatctta aatgagaatg ttgagccgac tccgggggcc gatttgacgt
     4381 tgatctcacc gcccatctgc tcgatgatcc gcttactaat cgcgagcccg agacccgtac
     4441 cgccgaaacg ccgattgatc gaatcatcgg cctgcgtgaa atactgaaac aacccgctga
     4501 gacggtcaga tggaattccg atgccgctat cgtgtaccga aaattcgatc gtcgccattc
     4561 cactgacgcg ggacaggcag cgcgttgcga cctccaccgt tcccgtctca gtaaacttgg
     4621 ccgcgttacc gacgagattg agtaagacct gacggatccg agttgggtcg ccgagcagcg
     4681 cctgcggtac ggactcgtca ggcgtcgaaa ttaaggtaag ccccttttct tcgatcttgg
     4741 gacccataat gctcatcacg tcggcagtga tcgacgcagg cgagaaggca attgcctcaa
     4801 actcgacctt ttgttcttcg agctttgaaa tatcgagaat atcattcagc aaaccgagca
     4861 ggctgttact cgagtcgtaa atcgtccgcg ccaggtaatg ctgctcctga tcgaggttgg
     4921 cctcaagcaa ggacgatgaa agcccgatca ccgcgttcat cggtgtgcgg atctcgtgac
     4981 tcatcatcgc gaggaacgcc gatttggccc ggctctcggc ttgcgcagcg gccgcgcggc
     5041 cacgcgccgc atccacctcg gcgaacgcgc gatttttgtc ctcctcgatc aactttcgct
     5101 cggtaatatc ggcgaaggtc accacccagc cgctcggcat caatcgtagc gaactttcta
     5161 tgattctctt gtcggcagtc gttcgaataa attggccttc taactgttct cccgctgcgc
     5221 ttcggagcct ctgataaatc tcctccaaga tggacgaggt atcgttgcca acgttatcga
     5281 cagaaataac gtcgccaaac ttcgatatac cgctaacgag cttgcactta atgccaaaca
     5341 atttaacaaa ttgatcgttc caaatgatga ttcgttcgaa gtcgtcgacc atgcaaagcg
     5401 cttgcggtat gttgttgatt gcagcgtaga gatactcccg cgaaacggtg gtctcggtga
     5461 gattcttggt aatgacattc agctcaaaat tagatcgtct gatgcgcacg ttttgtctgg
     5521 cgcttgcaaa taccataacg ccgccaaaca ctatgagcaa cccgacaatt ccagaaaatg
     5581 ccacatgcaa caatacgagc ttggtgctct cttgctgttc ttgatccgcg ttgaatgcgc
     5641 gcgctgccgc gacgacttca gctacgttcg tttgaatatc gccaaattct tccagcaaat
     5701 ccaaaataat atctggcttg acgttatcag gagcggtcgc ctttttcaca ttaccaaaaa
     5761 aagtatcaag cgccgaattt atcttttgca tgtttccgaa ttgaacagaa ttagattttg
     5821 taaattctga gaactcacca ttattcataa catttagccg gtttttgacg atatcaatgc
     5881 gtaactgcaa ttggggctta ccagcttgtg cgcccgggac ggctaattcc gcgaatgttt
     5941 ggccaaatcg attgagatca gccgctagtc tcgtcgcagc ccagacgata ttataatg
//
LOCUS       DATILV010000435         2988 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_101673, whole genome shotgun sequence.
ACCESSION   DATILV010000435 DATILV010000000
VERSION     DATILV010000435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2988)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2988)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2988
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101673"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            61..1539
                     /locus_tag="VLJ17_09910"
     CDS             61..1539
                     /locus_tag="VLJ17_09910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV23330.1"
                     /translation="MNSKGNSAEMELVAAVGAICPVFASIGLTMVWKLKRGLYRTLVL
                     AALLVGLCQASQAQEAPGAVPSTTFTGGAATLFQNVRIFDGKSAALSAPSNVLVRGNT
                     IERISVSPITVDPNANVIAANGRVLMPGLIDAHWHAFMAATPQPLLMTADASYLHLLA
                     ARQAEATLMRGFTTVRDLGGPVFGLKRAIDEGVMIGPRIYPSGAFISQTSGHGDFRFS
                     FEVPRTLGGPLSHSEVEGVAAIADSPDEVRLRAREQLRGGASQIKLMAGGGVNSPLNP
                     IESTQYTEAEIRAAVEAAENWGTYVTVHAYTPRAIRQAIAAGVKVIEHGHLIDEPTAK
                     LLADKGIWWSLQPLTRDEAVFARMDPVSQGKALAVWAGTDNAYKLAKKYKVKTAFGAD
                     ILFDAAAASRQGAELTKLVRWYTPAEALKMATADNGELMALSGFINPYPGKLGVVEEG
                     ALADLLLVDGNPLENIKLIEDPDKNFRVIMKDGRIYKNALRK"
     gene            1951..2919
                     /locus_tag="VLJ17_09915"
     CDS             1951..2919
                     /locus_tag="VLJ17_09915"
                     /inference="COORDINATES: protein motif:HMM:NF013087.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HSV23331.1"
                     /translation="MSEEHKHDHEHDHEHADEHEHASQHGHEHDHEHGHQHAHDHEHA
                     HDHEHSHEHGHGHSHGHKTHFHDPQHAAEFDRRTSGVRADLAEKLAEMLVLQGAEQIL
                     DVATGTGRVARPVAKRLKSGRVIGVDQALAMLDVGHQHADPIPAYYQCAGEADALPFK
                     PKSFDRAFVSFSLHHFHNSEGVVKEVLRVLKNGGRFVVLDPVVEEAKDSVDIALEARI
                     NQVFRRTHGDDFRFHTASSIQRLLTKAGYRIPRTNILSYSFNQESMDGIPTGQHWLEA
                     AEELETEAPELAARLKKNYFTWHSHGDHVHVKGSFSYALICGVKPD"
BASE COUNT          670 a          834 c          885 g          599 t
ORIGIN      
        1 atggtaacgt ttgtcggatt aatatccttg acaagatcag caacacgcgg ggcatacaca
       61 atgaactcaa aaggtaactc ggcggaaatg gagctggtgg cagcggtagg ggctatttgc
      121 ccagtcttcg catcaatcgg cctgacgatg gtctggaagt taaaacgcgg gctatatcga
      181 acgttagtgt tggcggcgct cctagtcggg ctttgccaag cgagccaggc gcaagaagcg
      241 ccgggtgcgg taccttccac tactttcacg ggcggcgcgg ccacgctatt tcagaacgtc
      301 cgcatcttcg atggtaaaag cgccgcgctc tcggctcctt ccaatgtcct ggttaggggc
      361 aacaccattg agcggatatc tgtgagcccg atcaccgtcg acccgaatgc caacgtcatc
      421 gcggcgaacg ggcgcgtgct gatgccaggc ctcattgacg cgcattggca tgcgttcatg
      481 gcagcgacac cgcagccgct cctcatgacc gccgacgcct cctacctcca tctgttggcc
      541 gcgcgacagg ccgaggcgac gctgatgagg ggcttcacaa ctgtgcgcga cctgggtggt
      601 cccgtgtttg gcctcaagcg cgccattgac gaaggcgtca tgatcggtcc gcgcatctat
      661 ccctcgggcg ctttcatctc gcaaacctca ggacacggag actttcggtt ctccttcgag
      721 gttccacgga cgcttggcgg tccgttgagc cactccgagg tcgagggcgt tgcggcgatt
      781 gccgacagcc ccgacgaggt ccggctgcgg gcgagggagc agttgagagg gggcgcgagt
      841 cagatcaagc tgatggcggg cggcggtgtc aactcacctc tcaatccgat cgaatcgacc
      901 cagtacaccg aagcggagat tcgtgccgcg gttgaggccg ccgaaaactg gggcacctat
      961 gtgaccgtgc acgcatatac gccgcgtgcg atccggcaag cgatcgccgc tggcgtcaag
     1021 gtcatcgaac acggccactt aatcgacgag cccaccgcca agttgctggc cgataagggc
     1081 atctggtgga gcttgcagcc cttaacccgt gatgaggccg tatttgcgcg aatggacccg
     1141 gtgtcgcagg ggaaggcact ggcggtgtgg gccggaaccg acaacgccta caagctcgcg
     1201 aagaagtaca aggtcaagac ggcttttggc gcagacattc tgttcgatgc ggcggctgcc
     1261 agccgacagg gggcggagct caccaagctg gtccgctggt acacgcctgc cgaagcgctc
     1321 aagatggcca ccgcggacaa tggcgagttg atggcccttt ccggatttat caatccttat
     1381 cccggcaagc tcggtgtcgt ggaagagggt gcgctcgcag atttgctgct agtcgatggc
     1441 aatccattag aaaatatcaa gctcatcgaa gaccctgaca agaactttcg ggtgataatg
     1501 aaggatggca ggatctacaa aaatgcactg cgcaaatgag gccttgtcca cgagtgactc
     1561 gattccgaca aacagatgcg gatcgagttc caggggcaat atatgcatac tcgggcccgg
     1621 tcgctggcta atttcggtga gggcgatcgt acagagctca aaccttaatc ctaacagttg
     1681 cattgatttc tccttttgct gaattttccg ccaacggctt tttcacgtct caccgatgct
     1741 ctcgcgtccg cgttccggtg tagagataca cgggcctctc cactgaaatc tattggtgat
     1801 gcattcacct tgaaggggac tggcgttata ggataatttg ggcaagtgaa cgacttgaga
     1861 gcggcgggaa ggttgcgcgc ttgcccacgc ttatctgtga tggaggcacg ccaagatcaa
     1921 tcgaatttca tttgaaggga tgacaaagcc atgagcgaag aacacaaaca cgaccatgag
     1981 cacgatcatg aacacgctga cgaacatgag catgcctccc aacacggcca cgagcatgat
     2041 cacgaacacg ggcatcaaca cgcgcacgat cacgaacatg ctcacgacca cgagcacagt
     2101 cacgaacatg ggcacgggca tagccacgga cacaagactc atttccacga cccgcaacac
     2161 gcggctgagt ttgatcgccg gacctcgggg gtccgcgctg atctcgccga gaaactggct
     2221 gaaatgctcg ttttgcaagg cgctgaacag attctcgacg tggcaacggg taccggtcga
     2281 gtggctcggc cggtggcgaa gcgcctcaag agcggccggg tcattggtgt tgatcaggcg
     2341 ctcgcgatgc tcgacgtcgg ccaccagcac gcggatccga ttcctgcgta ctatcagtgc
     2401 gccggtgaag ccgacgcttt gccatttaaa cctaaatctt tcgatcgcgc ctttgtgtcg
     2461 tttagcctgc atcactttca caattccgag ggagtggtga aagaagtgct tcgcgtattg
     2521 aaaaatggag gcaggttcgt ggttctcgac cccgtggtcg aggaagcgaa ggactccgtc
     2581 gacattgctc ttgaggccag gatcaatcaa gtgttccggc gtactcacgg cgatgatttt
     2641 cgctttcata cggcaagcag catccagcgg ctcctaacaa aagcgggata ccgcataccg
     2701 cgaaccaaca ttctgtctta ctccttcaat caagaaagca tggacggtat cccaacgggc
     2761 cagcactggc tggaggccgc tgaggagttg gaaaccgaag cgccggaact ggcggcgcgg
     2821 ctgaagaaga attacttcac gtggcacagc cacggcgacc atgtgcacgt caagggcagc
     2881 ttttcttacg ccctgatatg cggagtgaag ccggactagc agaaagttcc gagttccagg
     2941 tgccgtgttt cgggttgaag agttggcaga aaaacccgta ctggctca
//
LOCUS       DATILV010000436         3480 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3940383, whole genome shotgun sequence.
ACCESSION   DATILV010000436 DATILV010000000
VERSION     DATILV010000436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3480)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3480)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3480
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3940383"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..229)
                     /locus_tag="VLJ17_09920"
     CDS             complement(<1..229)
                     /locus_tag="VLJ17_09920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3300 domain-containing protein"
                     /protein_id="HSV23332.1"
                     /translation="MSSWVVKVSVFAFLLLVPFVAVAQGPSSNPQATTSDQLLKPEEL
                     DALVAPIALYPDTLLAEVLMASTYPLEVVQAE"
     gene            complement(516..1166)
                     /locus_tag="VLJ17_09925"
     CDS             complement(516..1166)
                     /locus_tag="VLJ17_09925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007609995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacid CoA-transferase subunit B"
                     /protein_id="HSV23333.1"
                     /translation="MESQAVIARRIALELKSGMLVNLGIGIPTLVANHLPEGVQVFFQ
                     SENGLIGTGAPPQEGMAHPMLTDAGGRPVTALPGASTFDSAMSFGLIRGGHLDITVLG
                     GLQVDQQGRLANWMIPGKMVPGMGGAMDLVTGAKRVIVAMQHTAKGSPKIMKKCSLPV
                     TSLRAVDLVVTELAVIAFPDGRATLLETGPEVSVAQVVAATEAELTIPDQVPVMAL"
     gene            complement(1174..1821)
                     /locus_tag="VLJ17_09930"
     CDS             complement(1174..1821)
                     /locus_tag="VLJ17_09930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacid CoA-transferase subunit A"
                     /protein_id="HSV23334.1"
                     /translation="MQTVSLEQSVAMIPNGASLMIGGFMAVGTPERIIDEIVSQNKRN
                     LTVIANDTAVPGRGIGKLVAAKLVRKVIASHIGLNPETQRQMMAGVLEVELVPQGTLI
                     ERIRAGGYGLGGVLTQTGVGTPVENGKQKIEVDGKTYLLEVALRADFALVRAFLADYL
                     GNLSYALTARNFNPVIAMAANTVIVDADNIVPVGVLAPDHVVTPAPVVDYLVANA"
     gene            complement(2072..2335)
                     /locus_tag="VLJ17_09935"
     CDS             complement(2072..2335)
                     /locus_tag="VLJ17_09935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23335.1"
                     /translation="MSAVPVRMNVLICIKNKRGEASMEVPVKTPDASDVRPQNRKADD
                     LVHFIRKLRWMGMDEEAEVLQAQLADCHALPQDNVIGGPTDTD"
     gene            complement(2371..2616)
                     /locus_tag="VLJ17_09940"
     CDS             complement(2371..2616)
                     /locus_tag="VLJ17_09940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23336.1"
                     /translation="MSKADRAWVAYLNEEATVTSNFANNVMATRSISNAAAAYQERVT
                     QRMELLSKQARDALDEIQGFTKAGSNILANGERSAIT"
     gene            complement(2886..>3480)
                     /gene="fabI"
                     /locus_tag="VLJ17_09945"
     CDS             complement(2886..>3480)
                     /gene="fabI"
                     /locus_tag="VLJ17_09945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004318 - enoyl-[acyl-carrier-protein]
                     reductase (NADH) activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HSV23337.1"
                     /translation="PIVMPLDVRTPGQMEAVFERISKEWGRLDFAVHSIAFSPKDTLQ
                     GRVVDVPHDGFLTTMGVSCWSFIRMAHLAEPLMPNGGTLFTMTYYGSQMVVENYNIMG
                     VAKAALESAVRYIAAELGPKGIRVHAISPGPLSTRAASGIPEFDELLEKAKAKAPARS
                     LVSIEDVGVATAFLAHDAARLITGETLYIDGGYHIID"
BASE COUNT          728 a         1039 c          925 g          788 t
ORIGIN      
        1 gttcggcctg taccacctcg agcggataag tcgaggccat cagtacttca gccagcaagg
       61 tgtcggggta caacgcgatc ggggcaacga gcgcgtcaag ctcctcgggt tttaggagtt
      121 gatcggatgt ggttgcctgc ggatttgagc ttggcccctg cgccacagcc acgaacggca
      181 ccaacagaag aaatgcaaac acagagacct ttaccaccca cgaactcatt ttacgcctcc
      241 cgttggtctg ttctcgtcgt caccttcgtc ggacgactgc cgcatttcca atttcagctg
      301 aagaatgaat tggtcgacat caagtaaccg tccagaacgt gtcaggagcc atcgaagctg
      361 gagggcgtcg ttcaatttta ttcgttcccg catatacaaa ccgatgcatt gctcatcgtc
      421 aaggtcaaca atccgatagc gcctgtagga ctttcatgtc cgttttccag ctcgcttgag
      481 gtcatctcac caaccctcaa ttgcagaaag ctcgctcata acgccattac cggaacctgg
      541 tcgggaattg tgagctccgc ctcggttgcg gcaacaacct gggcaacgga cacttcgggg
      601 ccggtttcga gcagagtcgc acggccatcc gggaatgcga tcaccgccag ttcggtgacg
      661 accaaatcca ccgcacgcaa tgaagtgacg ggcagcgagc attttttcat tattttgggg
      721 gagcctttgg cggtatgttg catcgccacg atgacgcgct tggcccccgt caccagatcc
      781 atagcgccgc ccatgcccgg caccatcttg cccggaatca tccaattggc gagacgccct
      841 tgttgatcga cctgcagacc gccaaggacc gtgatgtcga gatgcccgcc gcgaatgagg
      901 ccgaacgaca ttgcgctatc gaacgtgctg gcgccgggca gcgcggtaac agggcggccg
      961 cccgcgtcgg tcagcatggg atgcgccata ccttcttgcg gaggcgcacc ggtgccgatc
     1021 agcccgttct cggactggaa aaaaacctgc acgccttccg gtagatggtt tgcaaccagc
     1081 gtcggaattc cgatgcccag attgacgagc atgcctgatt tcagctcgag ggcaatgcgg
     1141 cgtgcaatga cagcctgcga ttccattccg gcctcacgcg ttggcgacaa ggtaatcgac
     1201 gacgggcgcc ggcgtcacga cgtgatctgg cgccagtaca ccgaccggaa caatgttgtc
     1261 cgcatcgacg atgacggtgt tggcggccat cgcgatcacc ggattgaagt tcctggcggt
     1321 cagcgcgtag ctcaggttgc ccagataatc tgccaggaac gcacgtacca atgcaaaatc
     1381 ggcgcggagt gcgacctcaa gcagataagt cttaccatct acctcgatct tctgcttgcc
     1441 attctcgacc ggtgtgccaa cgccagtttg ggttaggacc ccgcccagcc cataaccgcc
     1501 ggcgcggatg cgttcgatga gtgtgccttg cggcacgagt tccacctcca ataccccggc
     1561 catcatctgc cgctgggttt cggggttaag gccgatatga cttgcgatga ccttgcgcac
     1621 cagcttggcc gccaccagct tgccgatccc gcgcccaggc accgcagtgt cattcgcgat
     1681 tacggtgaga ttgcgtttgt tttggctcac gatctcgtcg atgatccgct ctggcgtgcc
     1741 taccgccatg aaaccgccga tcatcaaact cgcgccattg ggaatcatcg caaccgactg
     1801 ttcaagggaa accgtttgca tgttccaacc ttcctcaagc ctattgtgta gtccaaccgc
     1861 cgtcgagtgg ctgcgccgcg ccgcgaatct gggcggcctc aggaatacgt caaagcgccg
     1921 ttctgttccg gcgtgacgaa ttcgtgagac ggtttcgatc gctgtttttc ctttcaacgt
     1981 ccgcttttca cgcctttaat cagccttaca tgtgccaacg acgcgagctc gctgacattc
     2041 tccatttctg ccgttcgaca gcaccttctc atcaatctgt atctgtcggg ccaccaatta
     2101 cgttgtcttg gggcagagca tgacaatctg caagttgcgc ctgcaggact tctgcttctt
     2161 cgtccatacc catccaacgc aatttacgaa tgaaatgaac cagatcatcc gctttccgat
     2221 tctgcggcct aacatccgac gcatcaggtg tcttgaccgg gacctccatt gacgcttctc
     2281 ctcgtttatt tttgatacaa attaagacgt tcattctaac gggaacagca gacatgcggc
     2341 gtcttcctgg caactgaccg ccgcgcgaga tcaagtgatc gccgacctct cgccattagc
     2401 caagatgttg ctgccagcct tagtgaaacc ttggatctca tccaatgcgt cgcgggcctg
     2461 cttcgacagc aactccatcc gttgagtcac ccgttcctga taagctgctg ccgcgttcga
     2521 aatggatcgg gtcgccatca cgttgttggc aaagttggat gtcaccgttg cttcttcatt
     2581 caaataggca acccaagcgc gatcggcttt gctcaagcat cgaggaattc cttttgaacc
     2641 gcagcaaggg tctcaaggtg tttcttactg acagctggag ggatgaaatt tgtaaaaacc
     2701 ggatcagggt cctgttgccg cgctcctccc tttgtctgcc acgatcaatt attttcagac
     2761 ttggcctgat ctgcgaatga cttttgtcaa ctatatccaa ataatttatt ttttcctttg
     2821 acgccgctgg cgcgctgcaa atctgcggca cacatgctgc gcaacgtatt ttggtggggt
     2881 gcccgctagt cgatgatgtg atacccgccg tctatataaa gggtttcgcc ggtgataaga
     2941 cgggcggcgt cgtgcgccaa aaacgccgta gccacaccga cgtcttcgat gctgacaaga
     3001 ctacgggccg gagccttggc tttggctttt tcgagaagct cgtcgaattc cgggatgcca
     3061 gaagcggcgc gcgtggaaag cggtccgggc gaaatggcat gaacccgtat ccccttggga
     3121 ccgagttccg ccgcgatata acgcaccgcg ctttcgagcg ccgccttggc gacacccatg
     3181 atgttgtagt tctccactac catttggctg ccataataag tcatcgtgaa caacgtgccg
     3241 ccgttgggca tcagcggctc ggcgagatgt gccatgcgta tgaacgacca gcaggagaca
     3301 cccatcgtgg tcagaaatcc gtcatgtggg acgtccacca cccggccttg cagcgtgtct
     3361 ttaggcgaga aggcgatcga atgcacggca aaatcgagcc gtccccactc cttggaaata
     3421 cgctcaaaca ccgcctccat ctgtcccggc gtgcgcacat cgaggggcat gacgatgggc
//
LOCUS       DATILV010000437         4408 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3425989, whole genome shotgun sequence.
ACCESSION   DATILV010000437 DATILV010000000
VERSION     DATILV010000437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4408)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4408)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4408
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3425989"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..653
                     /locus_tag="VLJ17_09950"
     CDS             <1..653
                     /locus_tag="VLJ17_09950"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HSV23338.1"
                     /translation="PFGSIRNGQVEGYDVDIAKLVATDLGVRLQLVPVTSVNRIPALL
                     TDRVDLVIANLGISPDRAKTIAFSTPYAPFFSGVFGAPELVVKGPADLQGKKTAVTRD
                     TIEDRDLTTIAPQGAEIVRFDDNDAAISAFLSGKADLIATGNVVAAALLKQHPQKTIE
                     AKFRIKQSPPGIGLRRGASELLNWVNVFVFQRKLNGDLDRLSRQWFGEPLPELPIL"
     gene            650..1969
                     /locus_tag="VLJ17_09955"
     CDS             650..1969
                     /locus_tag="VLJ17_09955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015821516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HSV23339.1"
                     /translation="MSVAATSLAPMPPCDLLRAMFDAAIKVALPAHTISPYLPPKPKG
                     RTIVVGAGKASAAMAKAVEDLWSGPLEGLAVTRYGHAVPCRRVEIIEAAHPVPDAKGK
                     QAAQRILDLVSGLTKDDVVLALISGGGSALLALPAPGLTLEDKQAVNNALLRSGASID
                     EMNCVRKHLSAIKGGRLAAAAYPARVVTLLISDVPGDDPSVIASGPTVPDPTTFSDAL
                     AILRKYHIDEPRAAVSHLAAAADETPKPHDSRLAGIKTAMIATPQHSLEAAAEIASSA
                     GFTPFILGSAIEGEAREVGKVMAGIARQVVGYGQPAASPCALLSGGETTVTIRGSGRG
                     GRNVEFLLSLAISLDGLPGVFAIAGDTDGIDGAEEIAGALVTPDTLARACALGIDPKA
                     SLANNDGHGFFEALGDQIVTGPTLTNVNDFRAVLITNAAAKTSPGIR"
     gene            2017..3294
                     /locus_tag="VLJ17_09960"
     CDS             2017..3294
                     /locus_tag="VLJ17_09960"
                     /inference="COORDINATES: protein motif:HMM:NF006775.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016813 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear
                     amidines [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="allantoate amidohydrolase"
                     /protein_id="HSV23340.1"
                     /translation="MNGTGSGAFKGERDSLTPGGALMRRLDELAEFSSEENALTRLYL
                     SPEYKAAALQVMAWMSEAGMKTMIDAVGNVIGRYDSQVSDKPALLLGSHIDTVHNAGK
                     YDGNLGVLVAIAAVAELNRAGERLSFPIEVIAFGNEEGVRFPVALTGSRTVAGTLDPA
                     ELDAEDEQGISVRVALQHFGCNPFDIPSIPRRRDDVLAYVEVHIEQGPVLESKDLPVG
                     VVTAINGASRFEIDVGGDAGHAGTVPMGLRKDALVAASEMILAIERRAAATPNLVATV
                     GRIEIQPGAVNVIPERACFTLDIRAPADADRVTAIHDLERELRAIAIRRGVALKMKQT
                     YEAAAATCEPWLIEQLATSITRAGIKVLRLPSGAGHDGLAITALCPIGMLFVRCRGGI
                     SHNPAESITVEDADVALCVTLDFLRHLEPAAGN"
     gene            3309..>4408
                     /locus_tag="VLJ17_09965"
     CDS             3309..>4408
                     /locus_tag="VLJ17_09965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HSV23341.1"
                     /translation="MTRTGLAANDGLHRKVRSYLESQRQAQTRFLAELVKAPSDNPPG
                     DCARHAERAAELLGELGLVVERHKVPKTLVRSSGMISVTNLIVRTRFGDGPIVALNAH
                     GDVVPPGEGWTRDPYGATVMDGWMYGRGAAVSKSDIATYAFALRAIEVSGVPLAGTVE
                     LHFTYDEEVGGEIGPKWLLDQGLTKPDYAIAAGFSYAVVTAHNGCLHLEVTVHGRSAH
                     AAMPYTGVDALEAANHLLAKLYEWRRSLRERISAIPGIGSPQLTVGLISGGINTNVVP
                     DRITFRLDRRMIPEEDPVAVERELQELIAKTASAYPQAHVEVRRILLAEPPKPLPGTE
                     RLAQILEGHASDVMGEPITSKGVPLYTDARHYA"
BASE COUNT          816 a         1361 c         1367 g          864 t
ORIGIN      
        1 cgccgttcgg ctcgatccgc aacggtcagg tcgagggtta cgatgtggat attgctaaac
       61 ttgtcgccac cgaccttgga gtccgtttgc agctggtccc ggtcaccagt gtcaaccgca
      121 ttccggcatt gctgaccgac cgggtcgatc tggtcatcgc caatcttggc atttctcctg
      181 accgggccaa gacaattgcc ttttcgacgc catacgcgcc gtttttctcc ggcgtgtttg
      241 gcgcgcctga gcttgttgtg aaaggtcccg ccgatctgca agggaaaaag accgctgtga
      301 cgcgcgatac gatcgaggat cgcgacctca caacgatcgc gccgcaaggc gccgagatcg
      361 tgcgcttcga cgataacgat gcggccattt ccgcttttct gtccggcaaa gctgatttga
      421 tcgcaactgg taatgtcgtg gcggccgccc tgctgaagca gcatccgcag aaaacgattg
      481 aagcgaaatt ccgtatcaaa caatcgccgc ccggcatcgg cctgcggcgt ggcgcctccg
      541 agcttctcaa ttgggtgaac gtcttcgtgt tccagaggaa gctcaacggc gacctagacc
      601 gcttgtcgcg tcagtggttc ggcgagcctt tgccggagtt gccgatccta tgagtgtggc
      661 cgccaccagc ctcgcaccga tgccgccgtg cgaccttctg cgtgcgatgt tcgacgctgc
      721 gatcaaggtc gcattaccgg cgcacacgat ctcgccgtac ctgccgccaa agccgaaggg
      781 ccgcaccatt gtggtcgggg ccggtaaggc atcggctgcg atggcgaagg ccgtggagga
      841 tctctggtca ggtccgctcg aaggactggc tgtgacccgc tatgggcacg ctgttccatg
      901 ccggcgggtc gaaatcatcg aagccgctca ccctgttcct gatgccaaag gcaagcaggc
      961 cgcgcagcgc attctcgacc tcgtctccgg cctcaccaag gatgatgttg tgcttgcgct
     1021 gatctcgggc ggcggctccg cgctgttggc tctgcccgct cccgggctca cgctcgagga
     1081 caagcaggct gtcaacaacg cgctgctccg gtctggcgcc tcgatcgacg agatgaattg
     1141 cgtgcgcaag cacctttccg ccatcaaggg cggccggctc gccgccgccg cataccccgc
     1201 gcgggtcgtg acattgctga tctccgacgt accaggagat gatccatccg tcatcgcttc
     1261 gggtcccacc gtgccggatc cgacgacgtt ctccgatgcg cttgccatcc tgcgcaaata
     1321 tcacatcgat gagccacgtg cggcggtctc gcatctcgcg gcggcggccg acgaaacgcc
     1381 gaagcctcat gactcgcggc ttgccggcat caagaccgcc atgattgcga ccccgcaaca
     1441 ctctttggag gctgccgcgg agatcgccag ctcagccggg ttcacgccgt tcattctcgg
     1501 tagtgcgatt gagggggagg cgcgcgaggt cggcaaggtc atggctggaa ttgctcgcca
     1561 agttgtcggt tatgggcagc ctgcggcctc gccgtgcgcc ttgctgtccg ggggcgaaac
     1621 gaccgtcacg atacgaggaa gcggacgtgg cggccgcaat gtcgaattcc tgctctcgct
     1681 cgcgatttcg ctcgacggct tacccggcgt gtttgcgatt gcgggcgaca ctgacggcat
     1741 cgacggcgcc gaggagatcg cgggcgcgct tgttacgccg gatacgctcg cccgtgcctg
     1801 cgctcttggc atcgatccca aggcgagcct tgccaataac gacggccatg gcttcttcga
     1861 ggcgcttggc gatcagatcg tgaccggccc aacgctcacc aatgtcaatg attttcgcgc
     1921 cgtgttgatc accaatgcgg cggcgaagac atcgccgggg attcgataat cattgtgaaa
     1981 atccgcgcag tgcggctctc gagggatggc acgaaaatga acgggaccgg atctggagca
     2041 ttcaaaggcg aacgagatag tcttacgccc ggcggagcgc ttatgaggag gctcgatgag
     2101 ctcgccgagt tctcgagcga agagaatgcg ctcactcggc tctatctctc gccggagtac
     2161 aaagccgccg ccctgcaggt catggcctgg atgtccgagg ccggcatgaa gaccatgatc
     2221 gatgccgttg ggaacgtcat tggtcggtac gatagccagg tctccgacaa gccggcgctg
     2281 ctattgggct cacacataga tactgtccac aacgccggca aatatgacgg caatctcggc
     2341 gtgctcgtcg ccatcgcagc tgtggcggaa ctcaatcgcg cgggcgagcg tctttcattc
     2401 cccattgagg tgatcgcctt cggcaatgaa gagggtgtgc gctttccggt agcgctcacc
     2461 ggttctcgca ccgtggccgg caccctcgat ccggccgaat tggacgcgga agatgagcaa
     2521 ggcatcagtg tgcgggtggc ccttcagcac tttggctgca atccgttcga tattccctcg
     2581 atcccacgcc gcagagacga cgtgctcgcc tatgtggagg tccacatcga gcaagggccc
     2641 gtgttggaga gcaaggacct gccggttgga gttgtcaccg cgatcaacgg agcaagtcgg
     2701 tttgaaatcg acgtcggcgg ggacgccggt cacgccggca ccgtgccgat gggactgcgc
     2761 aaggacgcgc tcgtcgctgc gtctgagatg attctcgcca tcgagcggcg cgcggctgca
     2821 actcccaatt tggtggcaac tgtgggtcgg atcgaaatcc aacccggtgc cgtgaacgtc
     2881 attcccgaac gggcttgctt cacgttggat atcagggctc cggcggacgc ggaccgcgtg
     2941 acagcaatcc atgatctgga acgcgagctg cgggcgattg ccattcgccg aggcgtggca
     3001 cttaaaatga agcagaccta tgaagcggct gcggctacgt gcgagccctg gctgattgag
     3061 caactcgcaa catcaatcac ccgggccggg atcaaggttt tgcggctgcc gagcggtgcc
     3121 ggtcatgacg ggctcgcaat cactgccctg tgtccgatcg gaatgctgtt cgtgcgctgc
     3181 agaggcggca tcagtcacaa cccggctgaa tcgatcacgg tcgaggatgc ggatgttgct
     3241 ctgtgcgtaa ctcttgactt cctgcggcat cttgagccgg ccgccggcaa ctgagacgga
     3301 aacttgcgat gacgaggact ggacttgccg cgaacgacgg ccttcacagg aaggttcgct
     3361 cgtatctcga gagtcagcgc caagcacaaa cgagattcct cgccgaactc gtcaaggcgc
     3421 cgtccgacaa tccccccggt gattgcgcac gccatgcaga gcgcgctgcc gaactcctcg
     3481 gtgaactggg gttggtggtc gaacgtcata aggtccctaa gaccctcgtg cgaagcagcg
     3541 gtatgattag tgtcaccaac ttgatcgtgc gcacccgctt tggcgacggg cccatcgtgg
     3601 cgctcaacgc ccacggcgac gtagtgcctc ccggcgaagg ctggactagg gacccgtatg
     3661 gcgccacagt gatggacggt tggatgtatg gtcgcggagc cgccgtctcg aaatccgaca
     3721 tcgccactta tgctttcgcg ctgcgagcga ttgaggtctc aggggtgccg cttgccggga
     3781 cggtcgagct ccacttcact tacgatgagg aggttggcgg cgagatcggc ccgaagtggc
     3841 tcctggacca ggggctgacg aagccggatt atgcgattgc cgccggcttt tcctatgccg
     3901 tcgtgaccgc ccataacggc tgccttcatc ttgaagtgac ggtccacggg cggtcagccc
     3961 atgccgcgat gccatacacc ggcgttgatg ctcttgaagc agccaatcac ctgctcgcga
     4021 agctctatga gtggcgacgc tcactgcgcg agcgcatctc agcaatcccg ggcatcggct
     4081 cgccgcagct caccgttggt ctcatcagcg gtggcatcaa cacgaacgtg gtgcccgacc
     4141 gcattacttt ccggctcgac cgccgcatga ttccggaaga ggatccggtc gccgtcgaac
     4201 gtgaacttca ggaattgatc gctaaaacgg cttctgcgta cccgcaggcg catgtcgagg
     4261 tcaggcgcat tctcttggcc gagcccccca agcctctccc gggcaccgag cggttggcgc
     4321 aaatcctgga aggtcatgca agcgacgtca tgggcgagcc aattacctca aagggggtgc
     4381 cgctatatac cgacgcccgc cactatgc
//
LOCUS       DATILV010000438         5827 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4959771, whole genome shotgun sequence.
ACCESSION   DATILV010000438 DATILV010000000
VERSION     DATILV010000438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5827)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5827)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5827
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4959771"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..231)
                     /locus_tag="VLJ17_09970"
     CDS             complement(<1..231)
                     /locus_tag="VLJ17_09970"
                     /inference="COORDINATES: protein motif:HMM:NF015424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TOBE domain-containing protein"
                     /protein_id="HSV23342.1"
                     /translation="MGTKACQLKGHGHLVAMATRMAVDGLALKAGVPMFALIKTVALD
                     RRSTASNGAGTAGRATTANAGDRLSGFSSESCR"
     gene            complement(232..1131)
                     /locus_tag="VLJ17_09975"
     CDS             complement(232..1131)
                     /locus_tag="VLJ17_09975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006610246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HSV23343.1"
                     /translation="MVDSSWLWAVFTLIAAAAQTVRNATQRELTGKLGTVGATHVRFL
                     FGCPFALIFLLAMLGAGGALPRPTLSFWLWLLDGALTQIAATALMLAAMGERSFVVAI
                     AYIKTEPVQVALFGLVFLGDAVTPMMAAAIVTATTGVIVMSLKGVGGTSGGGWRPTAL
                     GLSAGACFALSAIGFRGAILSLHDPSYAMAATFTMATGLMLQSVLLTFYLTLRDRAVL
                     SAIVAAWRPSLFAGFMGALASQFWFLAFALASAASVRTLALVEVLFAQAISHFIFRQP
                     VSPREGIGIVVIVIGVLLLIWVY"
     gene            complement(1134..1907)
                     /gene="ubiG"
                     /locus_tag="VLJ17_09980"
     CDS             complement(1134..1907)
                     /gene="ubiG"
                     /locus_tag="VLJ17_09980"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008689 - 3-demethylubiquinone-9
                     3-O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HSV23344.1"
                     /translation="MADEKIHSDVFADATVDADEVRRFSQLAGEWWNPRGKMAVLHKF
                     NPVRLAYIRDAACRQFGRDARHPPCLEGIRILDIGCGGGILCEPLARLGAGVVGADPS
                     PNNIEAAKLHADRGGLAIDYRVTTAEAIAGAGESFNVVLAMEVVEHVVDVGLFVRRCA
                     EMVKPGGLMVAATLNRTFKSFALAIVGAEYVLRWLPRGTHQWDKFVTPNELEIAMAKA
                     GLRVSDEIGVIYNPLADEWRLSSDMDVNYMLTAEKAVAD"
     gene            2048..3301
                     /locus_tag="VLJ17_09985"
     CDS             2048..3301
                     /locus_tag="VLJ17_09985"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011923780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HSV23345.1"
                     /translation="MARLVMKFGGTSVADIERIRNVARHVKREVDAGHEVAVVVSAMS
                     GTTNRLVEWCREASALHDAREYDTVVASGEQVTSGLLAIALQAIGVAARSWQGWQLPI
                     VTSEAHASARILDVNGDELVKRFLERKEVAVISGFQGVHSDTGRITTLGRGGSDTSAV
                     AIAAALKADRCDIYTDVDGVYTTDPRVVPRARRLDRIAFEEMLELASLGAKVLQVRSV
                     ELGMVRRVRIFVRSSFEPPESIDPHKNPPGTLICDEEDIVEQQVVTGIAFSKDEAQIS
                     IRNVQDKPGVAANIFGPLADANINVDMIVQNVSSDGATTDLTFTVSAADFERAKDTIS
                     NARAQIGYARLDGATDVTKVSVIGVGMRSHAGVAARAFRSLADRGINIRAITSSEIKF
                     SLLIDAAYTELAVRTLHSLYGLDKS"
     gene            3471..5738
                     /gene="ptsP"
                     /locus_tag="VLJ17_09990"
     CDS             3471..5738
                     /gene="ptsP"
                     /locus_tag="VLJ17_09990"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008965 - phosphoenolpyruvate-protein
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HSV23346.1"
                     /translation="MRGALGGPRVLLRRLREVMAEPVSAQDRLDKIVVLIAANMVAEV
                     CSVYVLRVDATLELYATEGLNREAVHQTVMRSDEGLVGLVASEANAVNLSDAQAHPAF
                     AYRPETGEEIYHSFLGVPILRAGNTLGVLVVQNRARRTYSEEEVEALQTTAMVLAEMI
                     ASGELSALAQPGHEPAVRRSLRLKGSALNDGIALGHVVLHEPRVVITNFIADDVQNER
                     ARLETAITALRADLDAMLEHGDVAEGGEHREVLEAYRMFAHDRGWVHKLEEAVLTGLT
                     AEAAVERVQSDTRARMLRQTDPYLRERLHDLDDLANRLLRQLLGHERAPAQEHLPENA
                     ILVARSMGPAALLDYDRKRLRALVLEEGGPTSHVAIIARALGIAAVGEVNNAIGLVDS
                     GDPIIVDGASGEVHIRPSPDLEASYIERVRVRARRQQQYMALRDRPCVTRDGAEISLF
                     LNAGLLVDLPHIAETGAAGIGLFRTELQFMVAAQFPRTGEQLALYRSVLDAAAGRPVT
                     FRTLDVGGDKVLPYMRNVEEENPALGWRAIRLGLDRPALLRSQIRALLRAASGRDLKL
                     MFPMVATVREFDEARELVERELTYLRRHNHRLPEHVEVGTMVEVPSLLYQLDELLDRV
                     DFLSVGSNDLAQFLFAADRGNPRVSARFDELSMPMLRALKDIAKRGKAHSKPVTLCGE
                     MASKTVSALALIAIGYRKLSLVPSAIGPVKAMALELNAGKAEALVDALIGSKNGAGSI
                     REKLIAFAEAEGIPL"
BASE COUNT         1117 a         1815 c         1795 g         1100 t
ORIGIN      
        1 ccggcaggac tcgctagaaa agccagataa acgatcaccc gcgttcgctg ttgtcgcgcg
       61 acccgccgtg ccggcgccgt ttgacgctgt gctgcgccga tcgagcgcca ccgttttgat
      121 aagtgcgaac atcgggactc cggctttgag ggcgagcccg tcaacggcca tccgggtcgc
      181 catagcgacc aaatgcccgt ggcccttgag ctggcatgcc ttcgtgccca ctcaatatac
      241 ccagatcagt aacaggacgc cgatcacgat cacgacgatg ccgatacctt cccggggcga
      301 gacgggctgc cggaatatga aatgcgaaat cgcctgggcg aataagacct cgaccagcgc
      361 aagcgtccgc acactggcgg cgctcgccag cgcaaaggca agaaaccaga attgcgacgc
      421 cagcgcgccc ataaacccgg cgaacaacga gggtcgccag gcggcgacga tcgcgctcag
      481 cacggcgcga tcgcgcaggg tgaggtagaa cgtcagcagc accgattgga gcatcagccc
      541 ggttgccatc gtaaacgtcg ccgccatggc atagctggga tcgtgcaggc tcaggatggc
      601 gccccgaaat ccaatggccg acaaagcaaa acatgcgccg gccgacagcc cgagcgcggt
      661 cggccgccag ccgccgcccg atgtaccgcc cacgcccttc agcgacatca cgatgacgcc
      721 cgtcgtcgcc gtcacaatgg cggccgccat catgggggtc acggcatcac cgagaaacac
      781 gaggccaaat agggccacct gcacgggctc ggtcttgata tatgcaatgg cgaccacgaa
      841 agatcgctcg cccatggcag cgagcatgag cgcggtggcc gcgatctggg tgagtgcgcc
      901 atcgagaagc catagccaga agcttaacgt gggtcgcggc aaggctccgc cagccccgag
      961 catcgccagc agaaagatca gcgcgaatgg gcatccgaac aggaaccgca catgggtcgc
     1021 cccgacggtg ccaagcttgc cggtcagctc ccgttgtgtg gcgttgcgca cggtctgggc
     1081 ggccgccgcg atgagcgtga acacagccca aagccagctt gagtcgacca ctgtcagtcc
     1141 gccactgcct tttcggccgt gagcatgtag ttcacatcca tatcggatga cagtcgccat
     1201 tcgtcggcca atggattgta gatgacgccg atttcatcgc tgacccgcaa tccggccttg
     1261 gccatcgcga tttcgagttc gttaggggta acgaacttgt cccattgatg ggtgccgcgg
     1321 ggcagccatc gcaacacgta ttcggcgccg acgatagcga gtgcaaaact cttgaaggta
     1381 cggttgaggg tcgccgcaac catgagcccg ccgggtttta ccatctcggc gcaacggcgc
     1441 acgaacagac caacatcgac gacatgctcg accacctcca tagccaatac cacattgaag
     1501 ctttcgccgg cgccggcaat cgcctcggcg gtcgtcaccc ggtagtcgat cgcaagacca
     1561 ccccgatccg catggagctt ggccgcctcg atattgttgg gcgacggatc ggcaccgacc
     1621 accccggcac cgaggcgcgc gagcggctcg cacaggatgc cgcccccgca gccgatgtcg
     1681 agtatccgga tgccctcgag gcagggcggg tgcctagcgt cgcggccgaa ttgccgacat
     1741 gctgcgtccc gaatataggc aagccgaacc ggattgaact tgtgcagtac tgccatcttg
     1801 ccgcgcgggt tccaccactc gcccgcgagc tgggagaagc ggcggacttc gtctgcatcg
     1861 acggtggcat cggcaaagac gtccgaatgt atcttttcat ccgccatgtt aacgatctcg
     1921 ccttatcctt gagacaaagt gctgtggttg cagcaaggtt gcctcgccgt tatgtatacg
     1981 cgccattttg ggtcggcgct ctcgcaaatt tgccctggca ccgatagaga ggatgtgagt
     2041 tttcatcatg gctcgactgg tcatgaaatt cggcggcacc tcggtggccg acatcgagcg
     2101 gatccgcaat gttgcgcgcc acgtcaagcg cgaggtcgac gctggtcatg aggtcgcagt
     2161 ggtggtctcg gccatgtcgg ggactaccaa ccggctcgtc gaatggtgcc gcgaggcgtc
     2221 ggcgctccat gacgcccgcg aatacgacac cgtggtggcg tccggcgaac aagtaacgtc
     2281 gggcttgctc gctatcgcgc tgcaagcaat cggtgtcgct gcacgatcct ggcagggctg
     2341 gcaattgccg atcgttactt ccgaggccca tgcgtccgcc cgcatcctcg acgtcaatgg
     2401 cgatgaactg gtcaagcgct tccttgagcg aaaggaggtc gcggtcattt ccggcttcca
     2461 aggcgtccat tcagataccg gacggataac caccctgggc cgcggtggct ctgacacctc
     2521 ggcggtggcg atcgcggccg ccctaaaggc cgatcgatgc gatatctaca ccgacgtcga
     2581 cggcgtctat actaccgacc cgcgcgtggt gccgagggcg cggcggctgg atcggatcgc
     2641 attcgaggaa atgctcgagc ttgcctcgct gggcgccaag gtgcttcagg tgcgctcagt
     2701 cgaactcggt atggtccgcc gggtgcgtat attcgtgcga tcgagcttcg aaccgccgga
     2761 gagcatcgat ccgcacaaaa acccgcctgg aaccttgatt tgcgacgagg aggacatcgt
     2821 ggaacaacag gtcgtcaccg gaatcgcgtt ctccaaggac gaggcgcaga tttcgatccg
     2881 caatgtccag gacaagccgg gcgtcgcggc caatattttc ggccccctgg ccgacgccaa
     2941 catcaatgtg gacatgatcg tccagaacgt gtcgtcggac ggtgctacca ctgacctcac
     3001 gtttacggtg tcggccgccg atttcgagcg cgccaaggac acgatatcca atgctagagc
     3061 gcagattggc tatgcacgcc tcgacggcgc caccgacgtc accaaggttt cggtcatcgg
     3121 ggtcggaatg cgcagtcacg caggcgtcgc cgccagggcc ttccgatccc ttgccgaccg
     3181 cggtataaat attcgtgcga tcacgagttc ggaaatcaag ttttccctgt tgatcgatgc
     3241 agcttacacg gaattggcgg tcagaactct gcactcattg tacggactgg ataaatccta
     3301 ggttatgatg caccgcaaca tggcctttcg ccttgccgcg tgtgcgtttc attcgctata
     3361 gccttaccgg gtgcggcgct gctgtgcagg agcgtgcgtc atttccgatt cacatgagcc
     3421 aggttagggg cgagcccggc ttggacattc ggcctgaggg acctcacgcc atgcgcggcg
     3481 cgctgggcgg tccgcgtgta ttgttgcgcc gacttcgcga agtgatggcg gagccggtca
     3541 gcgcgcagga tcgactcgac aagatcgtgg tgctgattgc tgccaacatg gtggcggagg
     3601 tgtgctccgt ctacgtgctg cgggtcgacg ccacacttga actttatgcc accgagggcc
     3661 ttaaccggga agccgtccac cagactgtga tgcggtccga cgagggcttg gtcggcttgg
     3721 tggcaagcga agcgaacgca gttaatctat ccgacgcaca ggcccacccg gccttcgcct
     3781 accgccctga gaccggcgaa gaaatctacc actccttctt gggtgtcccg attttgcgcg
     3841 ccggcaacac gctcggcgtg ctggtcgtgc aaaaccgggc gcgccgtacg tattcggagg
     3901 aagaggtcga ggcgctccag accaccgcga tggtgcttgc tgaaatgatc gcctcgggcg
     3961 agctttcagc gcttgctcag ccgggtcacg agcccgcagt gcgccgcagc ctgcggctta
     4021 aaggctccgc ccttaacgac ggcatcgcgc tcggccacgt ggtactgcac gagccgcgtg
     4081 tcgttatcac taattttatc gctgatgacg tgcaaaacga acgcgcccga ctggagaccg
     4141 cgatcacggc gctacgcgcc gacctcgatg ccatgctcga gcacggtgac gtggcggagg
     4201 gcggggagca tcgcgaagtc ctcgaagcct atcgcatgtt cgcccatgac cggggttggg
     4261 tgcacaagct tgaggaagcg gtgttgaccg gcctcaccgc cgaggccgcg gtcgagcgcg
     4321 tgcagtccga cacccgtgcc cgtatgctgc gccagaccga cccttacctg cgcgaacgct
     4381 tgcacgatct cgacgatctc gccaaccgcc tgttgcggca attgcttggc cacgagcgcg
     4441 ctccggccca agagcaccta ccggaaaacg ccatcctggt ggcgcgctcc atgggaccgg
     4501 cggcgctgct cgactacgac cgcaagcgcc tgcgcgccct cgtgctcgag gagggcgggc
     4561 ccacatcaca tgtggcgata attgctcgcg cgctaggtat cgccgcggtc ggagaagtca
     4621 acaatgcaat cggcctcgtc gattccggcg atcccatcat tgtggatgga gccagcggcg
     4681 aagttcatat tcgcccttcg cccgatctcg aagcttccta tatcgagcgg gtgcgggtgc
     4741 gagcacgccg ccagcaacag tatatggcgc tgcgcgacag gccgtgtgtg acgcgagacg
     4801 gcgccgaaat ctccttgttt cttaatgctg gcctgctggt cgatctgccg catatcgcgg
     4861 aaactggcgc cgccggaatt ggcctgttcc gcaccgaatt gcagttcatg gtggcggcgc
     4921 aatttccccg caccggcgag cagctcgcgc tttaccgctc cgtacttgac gccgctgccg
     4981 gccgtccggt cacattccgt acccttgatg tcggcggtga caaggtcctg ccctacatgc
     5041 gcaatgtgga ggaagaaaat cctgccctcg gttggcgcgc catcaggctc ggccttgatc
     5101 gtccggcgct gctgcgcagc cagattcgcg cattgttgcg cgccgcctct gggcgcgatc
     5161 tcaaattgat gttcccaatg gttgcgacgg tgcgcgagtt tgacgaagcc agggagcttg
     5221 tggagcgcga attgacctat ctgcgtcgac acaatcaccg gcttcccgag cacgtcgagg
     5281 tcggcaccat ggtagaggtg ccgtcattgc tctatcaact tgacgagcta ttggatcggg
     5341 tggattttct gtcggttggg tcgaacgatc tcgctcagtt tctgtttgcg gccgaccgtg
     5401 gcaatccgcg cgtgagcgcg cggtttgacg aactatcgat gccgatgctg cgtgccttaa
     5461 aggacattgc caagcgtggc aaagctcata gcaagcccgt gactttgtgc ggcgagatgg
     5521 catcgaagac cgtgagcgcg ctcgccctaa tcgccattgg ataccgaaaa ttgtctctgg
     5581 tcccttccgc gatcggcccc gttaaggcga tggcgctgga gctcaacgcc ggcaaggcgg
     5641 aagctttggt ggatgcactg atcggatcca aaaacggcgc tggttcgatt cgcgaaaagc
     5701 tgatcgcctt cgcggaagcc gaaggtattc ctttgtaacc cgcgcggttt tcaatgcttc
     5761 ccgaggcgaa actcgatatc atgctggcgc gtcacgcgtc gttggaagcg gagctttccc
     5821 gcccgct
//
LOCUS       DATILV010000439         9053 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2150050, whole genome shotgun sequence.
ACCESSION   DATILV010000439 DATILV010000000
VERSION     DATILV010000439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9053
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2150050"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..371)
                     /locus_tag="VLJ17_09995"
     CDS             complement(<1..371)
                     /locus_tag="VLJ17_09995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23347.1"
                     /translation="MKRMPSPSTILSLLRTTACIIAAAAWWILAGPTFAQDTPYVPDE
                     WKFGRRQAGATLQYCLDIRDPDLPIARKIGQAIAQALLLEPKPLELGQNSVGEDLDNL
                     YRVFLESCDVYLGFKLIADAYP"
     gene            complement(537..2300)
                     /locus_tag="VLJ17_10000"
     CDS             complement(537..2300)
                     /locus_tag="VLJ17_10000"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HSV23348.1"
                     /translation="MSTRRDWKTTVLFAPALLLVGASAMAQAPQATNPAASLTPVTDA
                     MLRDPPASDWLMWRRTYNGWGYSPLDQINKDNVKDLRPAWTWSLTTGATETTPIVHDG
                     VLFIHNSADKIQALNGATGDLIWEYKRDLPAQLLADNPNYLSKRNMAIYDDKLIVATS
                     DAHVIALDAKTGKIAWDHTTADWTKGWRYTAGPFIVNGKVIQGMTGCGNAEPGGCFIT
                     GHDIKTGAELWRVNTIAHPGDPNYDTWNGLPMESRFGASAWISGAYDPEQNLVFYGTG
                     QPYPWIAEMRGTMPKKPGMKVTAMYSDTTLAINPDTGKLQWYHQHLEDDTWDLDYVYE
                     RQLIDLPVNGETRKAVVTTGKLGIIEAIDRTNGQWLWHKETIPQNVVAAIDPKTGEKT
                     INVAAIPHIGQTTVNCPADPGGRGWPATAYSPKTGILYMPLNEYCSNTTPTPLDPGQA
                     YTGGGRAVFARVPVPNSDGKIGRVDAIKLADRSQVWSYRLRAPETAAVLPTGGGLVFN
                     GAWDRYFRAFDDTTGEVKWQMRLNNVINSFPITYSVNGKQYVAVAVGSGSSLAKALAT
                     LTPEIQNPDGGSVLWVFALPN"
     gene            complement(2599..3462)
                     /locus_tag="VLJ17_10005"
     CDS             complement(2599..3462)
                     /locus_tag="VLJ17_10005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23349.1"
                     /translation="MHWRSSIGALAVALGVSVVGVTAAFAFDESKYPDLRGQWRRIPV
                     PGITGQPGYDPTKIQGKAQQAPLTPESLAILEASIADQAKGGQGNDPTYNCLSPGMPR
                     IMTVYDPMEIVITPFATRMLTGHIHDSRRIYTDGRPWPEDIEPSFAGYSIGKWIDTDG
                     DGRYDMLEVETRGFKGPRVFDAAGIPLHSDNQTIVRERIYQDKADPDVLYDEITTIDH
                     ALTRPWTVLRKIGRVKTEQPVWSEAVCAEGNNHVGIAGETYFMSGDGYLMPTRKGQAP
                     PDLRYFKQSQR"
     gene            complement(3534..5204)
                     /locus_tag="VLJ17_10010"
     CDS             complement(3534..5204)
                     /locus_tag="VLJ17_10010"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HSV23350.1"
                     /translation="MISRKLLTSVSFAGLLVGLTTISVNAQAAAAFSGKVSSAEEGLM
                     EGVLVSAKKAGSTVTTTVVSNANGEFSFPAERMEPGQYNIAIRAAGYVLSGPKEIDVA
                     AGGPTNAEVKLSKAKNIQAQLSNGEWIMSAPGDARIKSFLPDCVGCHTLQRVFSALHT
                     QEEWKIVFARMGRYAPESTPVRPQLLLQGGARSERPRVPANMMDAAAEFLVSANVNNP
                     DNEGQAFKRLPRPKGRATSVIITEYDLPRKEALPHDVIVDADGHAWYSDFGNQFVGEL
                     DPKTGKVTDYPLETLRQDQPKGPLGMEFDPEGNIWIGMSYQAGASKIDRKTKQVTTYP
                     LPKEWQGITSQTNMVTPTHMNVDGKVWMEDTENGRVFRLDIATGKWEDRGQATTAKGE
                     TIRGYGLPADKDNNLYLMSFGDTRIGRLDAKTNVAEIWSTPMTRSRPRRGRFDDQNRL
                     WFAEYAANRIAMFDPKTEQIKEWKLPTDWSQPYDVVPTKGAAEVWTGSMLTDQVARLD
                     TKTDEIVEYLLPRTTNIRRVFAVDSGSRPVLWVGNNHGNAIVKVEPQD"
     gene            5951..8056
                     /locus_tag="VLJ17_10015"
     CDS             5951..8056
                     /locus_tag="VLJ17_10015"
                     /inference="COORDINATES: protein motif:HMM:NF014071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HSV23351.1"
                     /translation="MKPPNRSQSPVARSNVRLAADIGGTFTDVAAFDAATGELKLGKA
                     LSTPHRLVEGITVGIEKAGTAYAAAGLFLHGSTVAINTILERTGAKTALIITEGFRDI
                     YEIGRINRPDAYNLYFKKHVPLVERALRFEARERVLADGGIEIPLDESEIAALGRRLE
                     MLGVEATAILFLNCYRNADHEARAKALIEARHPAMFVSASHELSQEYREFERCSTVVA
                     NAYIGPKVRRYLGEIGEHLTLAGFDGTFLVVQSTGGLYEAEQAKLHCIRMLESGPAAG
                     VIGTKALCRALDLDNAIAFDMGGTTAKAGVIHKGEPLTAGAALIGGYERALPIQIAMM
                     DIFEVGTGGGSTARVENGALRVGPQSAGAQPGPACYGLGGTEPTVTDANLVLGRIGAD
                     RFLGGEMQLDMAAARTALISHIAKPLGMSLTAAADGILRIAATAMSYAVKTVTTERGL
                     DAGDFVLVAYGGAGPLHAVEVAREIGIRRVVIPNAPGVFSAFGMLYADLRYDYVRTWP
                     TQLDDAPFDDIARIYDELEREGRRAVANTSVAPQKVMISRAADMRYVGQEHAVTVDLP
                     MRVFEKQDRIAIKRHFDDMHLLRYGTSAPKEPAEIVSLRTTVMGVMRKPVMKEIARGG
                     AAPSKAARTGKRPVYFDGRGFIDTGTFARAALTAGNRITGPALIEEHASTTVLMPGDA
                     LHVDRFGNLDITVGNRRMG"
     gene            8148..>9053
                     /locus_tag="VLJ17_10020"
     CDS             8148..>9053
                     /locus_tag="VLJ17_10020"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HSV23352.1"
                     /translation="MARKITKQTATKHTNRRVLDPVITEIVRNGVIAVTEEMKTNLMR
                     TAYNMIIYEALDFTVGLFTPDGETVSIGIGLPMFIRGMAETVKAKIRHFGKVGIRPGD
                     IYITNDAYITGSHLNHVTLTLPIFDAGVLVGFSCCMAHWIDIGGTLGGMTTDIYSEGL
                     QIPILKYQNRGKVNQDVVDIICQNVRLPSRAIGDLRAQVTAVKTGERGFLELVARYGR
                     DHVTTAIAAIMDRSETAARARTKSIPDGIYEAESFMDDDGISIGKPIPIRVRVEVKGE
                     EMTIDLTDVSRQVRGFYNSGITTGHA"
BASE COUNT         1678 a         2769 c         2764 g         1842 t
ORIGIN      
        1 ggataggcgt ccgcaatgag cttaaagccc agataaacat cgcagctttc gagaaaaacg
       61 cggtagagat tgtcaaggtc ctcgccgacc gaattctggc cgagctcaag cggcttgggc
      121 tccagcagca gagcctgggc aatcgcctgg ccgatcttac gggcaatcgg cagatcggga
      181 tcgcggatgt caaggcaata ttggagcgtg gcgccggcct gccgccgccc gaatttccat
      241 tcgtcgggaa catagggcgt gtcttgagcg aaggtagggc cggcaagaat ccaccatgcc
      301 gcggcggcaa tgatgcatgc cgtcgtgcga agcagggaca gaatggttga cggcgacggc
      361 atccttttca cagcaagaat gctcacggcc ttaaggttgt agggtgcgca cggccaacgg
      421 ttccggcctt cggccggccc gacgacaggc tccgcgatcc cacctcggcc gcggagggca
      481 cgctttgcct tgcccaccct acaggtgatt ccagtcacac caaaatgctc accgcctcaa
      541 ttcggcaatg cgaacaccca cagtaccgag ccaccgtcgg gattttggat ctcaggcgtc
      601 aacgtcgcga gtgccttcgc gaggctcgat ccgctgccga ccgcgaccgc gacgtattgt
      661 ttgccattga cgctgtaggt gatcgggaaa gagttgatca cgttgttaag gcgcatctgc
      721 catttcactt cgccggtggt gtcgtcgaac gcccggaaat aacgatccca cgcgccgttg
      781 aagacgagac caccgccggt tggcagcacg gctgcggtct ccggcgcacg cagccggtat
      841 gaccacactt gcgagcggtc agccagtttg atcgcgtcga cgcgtccgat cttgccgtcg
      901 ctgttgggca cgggcacgcg cgcaaatacg gcacggccgc cgcccgtata ggcctggccg
      961 ggatcaagtg gcgtcggcgt cgtgtttgag cagtattcgt tgagcggcat gtagaggatg
     1021 ccagtcttcg ggctgtaagc ggtcgccggc cagccacggc cgcccggatc ggccgggcag
     1081 ttgactgtgg tctggccgat gtgcgggatc gcggcaacgt tgatggtttt ctcgccggtc
     1141 tttggatcga tcgccgccac cacgttctgt ggtatcgtct ccttgtgcca cagccactgg
     1201 ccgttggtgc ggtcgatggc ctcgatgata ccaagcttgc cagtggtcac caccgcctta
     1261 cgggtctcgc cattgaccgg caggtcgatc agctgccttt cgtagacata gtcgagatcc
     1321 catgtgtcgt cttcgagatg ctggtggtac cactgaagct taccggtatc cggattaatg
     1381 gcgagcgtcg tgtctgagta catcgcggtg accttcatgc cgggtttctt cggcatggtg
     1441 ccgcgcattt cggcaatcca cggatagggc tgaccggtgc cgtagaacac caggttctgc
     1501 tcggggtcat aggcgccgga aatccacgcc gaggcgccga agcggctttc catcggcagg
     1561 ccgttccacg tgtcatagtt cgggtcgccc ggatgcgcga tggtgttgac gcgccacaac
     1621 tcggcgccgg tcttgatgtc gtggccggtg atgaagcagc cgccaggctc cgcattgccg
     1681 caaccggtca tgccctgaat gactttgccg ttgacgatga acgggccggc cgtatagcgc
     1741 caccccttgg tccaatcggc ggtggtgtga tcccacgcga tcttgccggt cttggcgtcg
     1801 agggcgatga cgtgggcatc cgaggtcgcg acgatgagct tgtcgtcgta aatcgccata
     1861 ttacgcttgc tcaggtagtt cggattgtcg gcaagcagct gcgccgggag gtcgcgcttg
     1921 tattcccaga tcagatcgcc ggttgcgccg ttgagcgctt gaatcttgtc ggcagagttg
     1981 tgaatgaaca gcacgccgtc gtgtacgatc ggcgtcgttt cagtggcgcc ggtcgtcagc
     2041 gaccacgtcc aggccggtct caaatccttg acgttatctt tattgatctg gtcgagcggg
     2101 ctgtaacccc agccgttata ggtgcggcgc cacatcagcc agtcggaggc cggcggatcg
     2161 cgaagcattg catcggtgac gggcgtcagg ctggccgccg gattggtggc ttgcggcgcc
     2221 tgcgccattg cggaggctcc aaccagcagc agtgccggtg cgaacaatac cgttgttttc
     2281 cagtctcggc gcgttgacat ttgtctctcc cgtttacttt gcaaattcat tattaccgcc
     2341 tatcgagaat ccgccgaggc attcttgcga atttctcgtc acgatctcgg tgaaacttat
     2401 agctgatcgc agtccggcat tccattgcgt cacaaacgcc gcagcagccg aaggcgcgtg
     2461 cgtgttgtct tgtaaggcac ggggcttcgc gcactccgcc tcacggcgga tagcgccgcg
     2521 tgaggtgggg tgaggcacaa cggaggtccg ctttgctggg gcctctttgc ccatactgtg
     2581 gcccgatcgc tactcgcctc aacgttgcga ttgtttgaag tacctcagat cggggggcgc
     2641 ctggccctta cgggttggca tcaggtagcc gtctccgctc atgaagtagg tctcaccggc
     2701 gatgccaaca tgattgttgc cttctgcgca aacggcttcg ctccacaccg gctgctcggt
     2761 cttcacacgc ccgatcttgc gtagcaccgt ccatggacgc gttagcgcat gatcaattgt
     2821 ggtgatctcg tcatagagaa cgtcggggtc ggccttgtcc tgataaattc gctccctgac
     2881 gatcgtttgg ttgtcactgt gcagcggaat gcccgccgca tcgaaaacgc gcggcccctt
     2941 gaaaccgcgg gtttcgactt cgagcatgtc gtagcggcca tcgccgtccg tatcgatcca
     3001 tttaccgatc gagtatccgg caaatgaggg ttcgatatcc tccggccatg gccgtccatc
     3061 ggtgtagatg cggcgcgaat cgtggatgtg acccgtcagc atgcgggtgg cgaaaggcgt
     3121 gatgacgatc tccattgggt catacacggt catgatgcgc ggcatgcctg gggagagaca
     3181 gttgtaggtc ggatcgttgc cctgtccgcc cttagcctga tcggcgatgc ttgcttccag
     3241 gatcgccagg gattcgggcg tcagcggcgc ctgttgggcc tttccctgaa ttttagtcgg
     3301 gtcgtagcca ggctggccgg tgatcccggg gaccggaatc cggcgccatt ggccacgcag
     3361 gtcaggatat ttggattcgt cgaaagcaaa ggccgccgtt acgccaacta ccgaaacgcc
     3421 aagcgccact gccaatgcac caatcgaact ccgccaatgc ataaatcctc ccggaacgtt
     3481 ttcttaatcc ctccccttca cccgccttcg cgggtgaagg ggaggattga cagtcaatcc
     3541 tgcggctcca ctttgacaat ggcattgccg tggttattgc cgacccaaag caccgggcgc
     3601 gagccactgt cgaccgcaaa gacgcgtcgg atgttggtgg tgcgcggcag cagatattcg
     3661 acgatctcgt cggtcttggt atcgagcctt gcgacctggt cggtcagcat ggacccggtc
     3721 cacacctccg cggcgccctt ggtcggcacc acgtcatagg gttggctcca gtcggtcggc
     3781 agcttccact ccttgatctg ctcggtcttc ggatcgaaca tggcgatgcg gttggccgca
     3841 tattcggcga accacaatcg gttctggtcg tcgaaccggc cacggcgcgg ccgcgagcgg
     3901 gtcatcgggg tcgaccagat ctcggcgacg ttggtcttgg cgtcgagccg gccgatccgg
     3961 gtgtcgccga acgacatcag atagagattg ttgtccttgt cggcaggcag accgtagccc
     4021 cggatggtct cgccctttgc ggtggtggcc tggccgcggt cttcccattt gccggtcgcg
     4081 atatccaagc ggaacacgcg accgttctcg gtgtcctcca tccacacctt gccatcgaca
     4141 ttcatatggg tcggcgtcac catgttggtc tggctggtga tgccctgcca ttccttcggt
     4201 agcggatagg tcgtgacctg cttggtcttg cggtcgatct tcgaggcgcc ggcctgatac
     4261 gacatgccga tccagatgtt gccttccgga tcgaattcca ttccgagcgg acccttgggc
     4321 tgatcctgcc gcagcgtctc caagggataa tcggtcactt tgccggtctt gggatcgagt
     4381 tcgccgacga actgattgcc gaaatccgaa taccaggcgt ggccgtccgc atcgacgatg
     4441 acatcgtggg gcagcgcctc tttgcgcggc aaatcgtatt ccgtgatgat cacgctggtg
     4501 gcgcggccct tcggacgcgg cagccgcttg aacgcctgtc cttcattgtc gggattattc
     4561 acattggcgc tgaccaggaa ttcggccgcc gcatccatca tgttggcggg aacgcgcggg
     4621 cgctcgctgc gggcgccgcc ttgcaggaga agctgtggac gtaccggcgt gctttccggc
     4681 gcatagcgtc ccatgcgtgc gaacacgatt ttccactctt cctgggtgtg aagcgcggag
     4741 aagacgcgct gcagcgtgtg gcagccgacg cagtccggca ggaacgactt gatgcgcgcg
     4801 tcgcccggcg cactcatgat ccactcgccg ttggacagct gagcctggat gttcttcgcc
     4861 ttgctgagct tgacctcggc attcgttggg ccgcctgccg cgacgtcgat ctctttcggc
     4921 cccgacagga cgtagcccgc cgcccggatg gcaatgttat actgtccggg ctccatgcgt
     4981 tcggcgggga agctgaattc gccgttggcg ttgctcacca ccgtggtggt gacggtcgag
     5041 cctgcctttt tggcactgac caaaacacct tccatcagac cttcttcggc ggacgacacc
     5101 ttgccactga aagcagcggc ggcttgcgca ttcacgctta tggtcgtcag gccgaccagc
     5161 aggcccgcga agcttacgct cgtcaaaagc tttctggata tcattttttt cctccctgcg
     5221 cggtcgtccg aaccggtcaa tctgaaccaa gttccgcatg ccgccgcgca tctgttgcca
     5281 actcgtcatc gcatgccggc catcggatga ttcaacagga gccggcgctg gccgtcgcaa
     5341 tgggttcata aagcgcaacc ggccgcaatt cacagcacat gagaaagcta tcccacttcg
     5401 gtcggttggg aaagcattcg aacgattggt gcgttgcaaa ctgcgatcaa ggcgtccgcg
     5461 tgcgctcgaa gacaaaaaaa tgcgcggccg ggttgagaga gcccccgcgc acctgccctg
     5521 ccccgatcca catgccgcaa ccgttgtccc cgcgaaggta gaggcaaact caaaaagccc
     5581 agcgcctgac tcggccgaaa aacgaacgtt tcatgcgctg ggagggagcc gttaacggga
     5641 cacggattga gcacgccgat tgtttcgaca tgtgatggtc gcgcttacgg attgcggcgg
     5701 tgcattaatt tgatataaat ataatatctt atggaaatga atatttcaat taaaaaataa
     5761 tattatgttt ttgcgtcagc ctcggcgagg cggtcgcctg ccgtcgcatc acgttcgatg
     5821 gaatccaaca gctgacagca aatcgatccc gaacctcagc caacatactg gcagggcgcg
     5881 aacttgctct cgctgccccc ttcggtgtag gggcggcaca acgcgcctgc gggcaatcga
     5941 gacccctccg atgaaacctc ccaaccgatc gcaatccccg gtggcgcgct ccaatgtgcg
     6001 tcttgccgcc gacattggcg gtaccttcac ggacgttgcg gccttcgatg ccgcgaccgg
     6061 cgagctcaag ctcggaaagg cactgtcgac gccgcaccgc ctcgtcgagg gcatcacggt
     6121 tggcatcgaa aaagccggca ccgcctacgc cgccgccggt ttgttcctcc atggatcgac
     6181 agtggcgata aatacaattt tggagcgtac cggtgctaag accgcgctca tcatcactga
     6241 gggcttccgt gacatttacg agatcggccg cattaaccga cctgatgcct acaatttgta
     6301 tttcaagaag catgtgccgc tggtagagcg ggcgctgagg tttgaggcgc gcgagcgcgt
     6361 gctcgccgac ggtggtattg agattccact tgacgaaagc gagatcgctg cgctcggccg
     6421 acggctcgaa atgctcggcg tcgaggcgac agcgattctt ttcctcaatt gctatcgcaa
     6481 tgccgatcac gaagcgcgcg ccaaggcact gatcgaggct cgccatcccg caatgttcgt
     6541 gtcggcctct cacgaactgt cccaggaata ccgggagttc gagcgctgct cgaccgtcgt
     6601 cgccaacgcc tatatcggtc ccaaggtgcg ccgctatttg ggcgaaatcg gcgagcacct
     6661 aacactggct gggttcgatg gcacgttctt ggtggtgcaa tcgaccggcg gcctttatga
     6721 ggccgagcag gcaaaattgc actgcattcg gatgctggaa tccgggcccg cggcgggcgt
     6781 catcggcact aaggcgctat gtcgggcact ggatctcgac aacgccatcg cgttcgacat
     6841 gggcggcacc accgccaaag ccggcgttat ccataaggga gagccgctta cggccggtgc
     6901 ggcgctgatc ggcggctatg agcgggcact gccgatccaa atcgccatga tggacatttt
     6961 cgaagtcggc accggcggtg gctcgaccgc tcgggtcgaa aacggcgccc tgcgggtcgg
     7021 accacaaagc gccggtgcgc aaccggggcc ggcctgctac ggcctcggtg gcaccgagcc
     7081 tactgtcacc gacgccaacc tcgtcctcgg gcgcatcggc gccgaccgct ttctcggtgg
     7141 cgaaatgcaa ctcgatatgg cggcggcgcg gacggcgctc atctcccata tcgccaagcc
     7201 actcggcatg agcctaacgg ccgcggctga cggcatcttg cgcatcgctg cgaccgccat
     7261 gtcctacgcg gtcaagaccg tgaccaccga gcggggcctt gatgccggcg acttcgtgct
     7321 ggtggcctat ggcggcgctg gcccgctcca cgccgtcgag gtcgcccgcg agatcggcat
     7381 ccgccgggtc gtcatcccga atgcgccagg ggtgttctcg gccttcggca tgctgtacgc
     7441 cgatctgcgc tacgactacg tgcgcacttg gccgacgcaa ctcgacgacg ccccgttcga
     7501 cgacatcgcg cgcatctatg acgagctcga acgcgagggc agacgcgctg tcgccaacac
     7561 ttcggtggcg ccccaaaagg taatgattag ccgcgctgcc gatatgcgct acgtcggcca
     7621 agagcatgcc gttacggtcg acctgcctat gcgggtgttc gaaaaacagg atcgcatcgc
     7681 catcaagcgc cacttcgacg acatgcatct gttgcgctac ggcaccagcg cacccaagga
     7741 acccgccgaa atcgtcagtt tgcgcaccac cgtgatgggt gtgatgcgta agcccgtcat
     7801 gaaggagata gctcgcggcg gggccgcgcc gtccaaagcg gctcgcaccg gcaagcgacc
     7861 ggtctacttc gacggtcgcg gcttcattga cacgggtacg tttgctcgcg ccgcgctcac
     7921 cgctggcaat cgtatcacgg gtccggcgct gatcgaggaa catgcatcga ccacggtgct
     7981 gatgcctggc gacgcgctgc acgtcgatcg gttcggtaat ctcgatatca cggtcgggaa
     8041 tcgaaggatg ggttgagctc ttgcgaaacc catcgacggc tgtgagcgcg gcacgccttg
     8101 gtttcgctgt cgctcaacca tcctacgccg cggagaagga gcgcgcgatg gcgcgaaaga
     8161 tcacaaagca gactgcgacg aagcacacaa atcgccgcgt cctcgatccg gtgatcaccg
     8221 agatcgtgcg caacggcgtt attgcggtga ctgaggaaat gaagaccaac ctcatgcgca
     8281 ccgcctacaa tatgatcatc tacgaggcac tggatttcac agtcgggttg ttcacgccag
     8341 acggtgagac ggtgtcgatc ggcatcggct tgccgatgtt catccgcggc atggcggaga
     8401 ccgtgaaggc aaagattcgc catttcggca aggtcgggat caggccaggc gacatctata
     8461 tcaccaacga cgcctacatc accgggagcc acctcaacca cgtcacgctg accctgccga
     8521 tcttcgatgc cggcgtgctg gtcggcttct cctgctgcat ggcgcattgg atcgacatcg
     8581 gcggcacgct cggcggcatg acgaccgaca tctattcaga gggcttgcag atcccgatcc
     8641 tgaagtatca gaaccgcggc aaggtcaatc aggacgtggt cgacatcata tgccagaacg
     8701 tgcggctgcc gagccgggcg atcggcgact tacgggctca agtgacggcg gtgaagactg
     8761 gcgagcgggg ctttctggaa ctcgtcgccc gctacggccg cgaccacgtg accacggcca
     8821 tcgcagccat catggaccgc tccgaaacgg cggcgcgcgc ccgcaccaag tcgatcccag
     8881 acggcatcta tgaagcggag tccttcatgg acgacgacgg catttcgatc ggcaagccga
     8941 tcccgatccg ggtgcgcgtc gaggtcaaag gcgaggagat gactatcgac ctcaccgatg
     9001 tttcccggca ggtgcgaggc ttctacaatt ccggcatcac caccggccat gcc
//
LOCUS       DATILV010000440         2966 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4191933, whole genome shotgun sequence.
ACCESSION   DATILV010000440 DATILV010000000
VERSION     DATILV010000440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2966)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2966)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2966
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4191933"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1097)
                     /locus_tag="VLJ17_10025"
     CDS             complement(<1..1097)
                     /locus_tag="VLJ17_10025"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HSV23353.1"
                     /translation="MRTRRLLSILTLGFAVIFFQAQPAAAENKVAAALAGQITSEAEG
                     AMEGVVVSAKKDGSTVTVSVISDAQGHYSFPTNRLAAGKYTLKIRAIGYDLTGPATAD
                     IADEQTTMVDLKLRKTRNLVAQMSNAEWMASLPGTDDQRAFLLNCVGCHTLERIIRSS
                     HDVNEWTQVITRMMGYGAVSQPIKPQRMLDPARSGTPEQYRKTAEYLATINLSEVEKW
                     EYPLKMLDRPKGRATRAIITEYDLPRPTTEPHDVLVDAQGSVWYSDFGELFISKFDPK
                     TLKLTEYPLKKFKAEAPVGNLSLEFDKRGTLWFDTMYQGSLGNLDPKTEEIKWYPLAA
                     EYNDNRVQLNFVGLRHDVDGKVWTKSVGTQD"
     gene            1763..2038
                     /locus_tag="VLJ17_10030"
     CDS             1763..2038
                     /locus_tag="VLJ17_10030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4242 domain-containing protein"
                     /protein_id="HSV23354.1"
                     /translation="MKRYVIERDLPGIGNLNREQLKDAAATSNNALAKLSGRAQWLQT
                     YVVDDKTFCIYLADGEASVREHARLSGFPASKVTEVRNVIDPTSAIS"
     gene            2454..>2966
                     /locus_tag="VLJ17_10035"
     CDS             2454..>2966
                     /locus_tag="VLJ17_10035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HSV23355.1"
                     /translation="MARKAKSEGRPSLATPRLSSTERRDAMLDVTVVLLEAGYASTAI
                     VPIEVFHSAGLLWNWLHGEAQQPRFRAQVASIDGRRVTSLCNLDLMPGCSIHDIKRTD
                     IIILPAAGWEVLDQIAQNTSLLPWLRKWHARGATIAGVCTGVAFLAECGLLDGRQATT
                     HWGVAEILRRR"
BASE COUNT          579 a          847 c          899 g          641 t
ORIGIN      
        1 atgtcctgcg tgccgacgct cttggtccaa actttgccgt ccacgtcgtg gcgcagcccg
       61 acgaagttta gctggacgcg attgtcgtta tattcggccg ccagcgggta ccatttgatc
      121 tcttcggtct tgggatcgag attgccgagc gagccctggt acatggtgtc gaaccacaag
      181 gtgccgcgct tgtcgaactc aagcgagaga ttgccgaccg gagcctccgc tttgaacttc
      241 ttcaagggat attcggtgag cttgagggtc ttcgggtcga acttggagat gaagagctcg
      301 ccgaaatccg aataccagac cgatccctgg gcatcgacca gcacgtcgtg cggctcggtg
      361 gtcggccgcg gcaagtcata ttccgtgatg atggcgcggg tcgcccggcc cttgggccga
      421 tcgagcatct tgagcggata ttcccacttc tcgacctcgc tcagattgat cgtggcgagg
      481 tattcggccg tcttacgata ctgctcgggg gtgccggacc gcgccggatc gagcatgcgc
      541 tgcggcttga tcggctggct caccgcccca tagcccatca tgcgggtgat gacctgggtc
      601 cactcattca catcgtggct ggagcgtatg atgcgttcca gggtgtggca gcctacgcag
      661 ttcaacagga aggccctttg atcatccgtg cccggaaggc tcgccatcca ttcggcattg
      721 ctcatctggg cgacgagatt gcgcgtctta cgtagcttga gatccaccat ggtggtctgt
      781 tcgtcggcga tgtccgcggt tgccggaccg gtgagatcgt agccgatggc gcggatcttc
      841 aacgtgtatt tgcctgctgc caatcggttc gtcggaaagc tgtagtggcc ttgcgcgtcg
      901 ctgatgacgc tgaccgtgac ggtcgagccg tccttcttgg cgctgaccac gaccccctcc
      961 atggcacctt ccgcctcaga ggtaatctgt ccggccaagg ccgcggcgac cttgttctcg
     1021 gccgctgcag gctgcgcctg gaagaaaatg acggcgaagc cgagcgtcaa aatggacaac
     1081 agtcgtcgtg tccgcatcgg ttcctccttg tgggttgcca tggttctcta ggttgccatg
     1141 gttcaaagat acacctctcg caagacacat ggtacagtga aaggctgttc gaatccactg
     1201 tgcttattgt gcaagcacat gtggatgatg cccaggttga gcgcgttttt gagcggtcgc
     1261 acaaggcctg cacttctcat ggcatgggca acattcgagg caatcggcca agctatgctt
     1321 cccgacagat tgcaaagccc gcgaacaccg agtccgctta tcgaggtgca gcagctgagg
     1381 gccacataac tgcgaccgaa agcgatcatt tgagaagcct ggccaagagt cgaaaccttc
     1441 tgattcatgg cggcttggaa agttcggtgc ccgaaaccga caagcagcac tttgtcgatg
     1501 tcctgaagac tgtgtgcaat tttattcttt gatgatcgcg aaacggcagt tcgctaagcg
     1561 cttcatctct tctcaggggc cggaaggaca gcgccggaag ggaaccggtg tcgcatccca
     1621 ccaggccgac gccgacagcc cgatggtgtg tcggcaggca tttgtcataa tcaccgctct
     1681 acattgtcaa aagcgccatc tatcatgtaa ggtcaaattc gctgatcttg cgctccgtca
     1741 acaccagctc ggagtgaaaa ccatgaaacg ctatgtgatc gaacgtgact tgcccggtat
     1801 cggaaatctg aatcgcgaac agctcaagga cgctgccgca acctccaaca atgcgctggc
     1861 gaagctttcc ggcagagcgc agtggctgca gacgtacgtc gtggacgaca agactttctg
     1921 catctacctc gctgatggtg aggcctcggt tcgtgagcac gcccgattga gcgggtttcc
     1981 ggcaagcaag gtcaccgaag tgcgcaatgt catcgatccg acgagcgcga tttcctgatt
     2041 gagcggcgcc gccacgccgg aacagtgggc ggcgctgcaa aacgcaaaag acctcagcta
     2101 tgactcatct gggcgaagct tcgagcggac aattctcatg ggttgatatg gcagcgaccg
     2161 atgccgacag cgcgacgacc ttctatggac aaatgttcgg ttggacttct tgcggacagc
     2221 cggcgaatgg cggcagcttc gcacgcctgc ggatatccga tcaggacgtc tgctcaatct
     2281 atcagttgag gcgcgtgcat ctcgaccgga ggtgccctcg cattggacgc cccatttcgg
     2341 gggggacaat gtgaacgagc cgtctggcgc acggattgtg ctcatcttga attcggtcgg
     2401 cgcgcaggtc ggtttatggg agccgattag ggcagacagg ggccagagcg cacatggcta
     2461 ggaaagccaa atccgaaggt cgaccgagtc tcgctacgcc gcgcttgtca tcgactgagc
     2521 gccgcgacgc catgctggat gtaacggtcg tccttcttga ggccggttat gcatcgacgg
     2581 cgattgtgcc gatcgaagtc tttcattctg ccggcctgct ttggaattgg ctccatggcg
     2641 aggctcagca gccgcgattc cgagcgcagg tcgcctcgat tgatgggcgc agggtgacca
     2701 gcctctgcaa tttggatctt atgccggggt gctcgatcca cgatatcaag cgaaccgaca
     2761 tcattattct gcctgcggca ggctgggagg tgctcgacca gatcgcacaa aacacctccc
     2821 tgctgccctg gctgcgtaag tggcacgcgc gcggggctac cattgcgggc gtctgcacgg
     2881 gcgtcgcgtt tttggcagag tgcggccttc tcgacggccg tcaggccacc acgcattggg
     2941 gcgtggccga aatattgcgc cggcgc
//
LOCUS       DATILV010000441         1702 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2917036, whole genome shotgun sequence.
ACCESSION   DATILV010000441 DATILV010000000
VERSION     DATILV010000441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1702)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1702)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1702
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2917036"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1587
                     /locus_tag="VLJ17_10040"
     CDS             <1..1587
                     /locus_tag="VLJ17_10040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011084644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HSV23356.1"
                     /translation="VPDDWVIEDEGFSGASLLRPGLERLRDLAAEGHIQAVLIHSPDR
                     LSRKYAYQVLLTEEFARYGVETIFLKAPHSDTPEDQLMLQFQGMIAEYERAQILERSR
                     RGKRHRAKAGEVSVLGGAPYGYRYIRKTSEAPARYEIDAAEAEVVRLVYDKYTLGGLS
                     IGAIARLLHGMGVPTRRRVRWERSVVWAILRNPAYKGTACFNKTQTGPRQKLTKPFRL
                     SGRAVHGDKSSSHERPRDQWIEIPVPAIVSEETLALAAERLADNKRFAPRRTIEPSIV
                     QGLVSCRKCGYALSRTSARTTARKIHYYRCLGSDAWRHLGGAVCDSRPIRQDLLDQIV
                     WQEVIHLIEDPTLIQAELDRRLEAARAAEPTKRRREALERELTRIRKSMERLLTAYQE
                     DLLSLDELRRRMPELRAREESMRAERQAILDQAADRTSFLRLAETLTAFLQRLHQSAE
                     TLEIAERQKVVRLLVKEVLVDNDTITIRHSIPAQAPTPPAGGTPLPSNGKLPVRDESY
                     LLRSGSAEPYACKFGCPTLG"
BASE COUNT          344 a          534 c          525 g          299 t
ORIGIN      
        1 gtacccgatg actgggtgat cgaggacgaa ggctttagcg gcgccagtct tttgcggcca
       61 gggctggagc gactgcgcga tctcgctgcc gagggtcaca ttcaggcggt tctgatccat
      121 tcacccgacc gcttgagtag aaaatatgcc tatcaagtcc tgctgaccga agagtttgcc
      181 cgttacggag tcgagacgat ctttctgaaa gcgccgcatt ccgacacgcc cgaagatcaa
      241 ctgatgctgc agttccaggg catgatcgcc gaatacgaac gggcgcagat tctcgaacgg
      301 tcccgccgcg gcaagcgtca tcgcgccaag gccggggaag tctcggttct gggtggtgcg
      361 ccctatggct accgttacat ccgcaagacc agcgaggcac cggcacgcta cgagatcgat
      421 gctgccgaag ccgaagtcgt gcggctggtc tacgacaagt ataccctggg cggcctgagt
      481 atcggcgcga ttgcccggct gctacacggg atgggggtcc ccacccgtcg gcgggttcgc
      541 tgggaacgat cggtcgtctg ggcgatcctg cgcaacccgg cctataaggg aacggcctgc
      601 tttaacaaga cgcagaccgg cccgaggcaa aagctgacaa agccgttccg cttgtcgggg
      661 cgagcggtcc atggggataa gagtagcagt cacgaacggc cccgtgacca atggatcgag
      721 ataccggtcc cggcgattgt cagcgaagag accttagctc tggcggcgga gcggctggct
      781 gacaacaagc gcttcgcgcc ccgccggacc atcgagccca gcatcgtcca aggattggta
      841 tcctgccgca aatgcggcta tgcgctgtcg cggacgtcgg cccgcaccac cgcgcgcaaa
      901 atccattact accgctgtct cggctccgac gcttggcgcc atctcggcgg ggcggtgtgc
      961 gacagccggc cgatccgtca agacctgctc gaccagatcg tgtggcagga agttatccac
     1021 ctgattgaag acccaacgct catccaggcc gaactcgatc ggcgccttga ggcagcccgt
     1081 gccgcggaac cgacaaagcg aaggcgagaa gccctcgaac gcgagctgac ccggatcagg
     1141 aaaagcatgg aacggttgct gacggcctat caggaagatc tcctatccct cgatgaactg
     1201 cgccgtcgga tgccggaact gcgcgcccgc gaggagtcaa tgcgggcgga acgtcaggcg
     1261 atcctcgatc aggccgccga ccgtacgtcg ttcctgcggc tggccgaaac cctgaccgcc
     1321 ttcctccagc gattacacca gtcggcggaa acgctggaaa tcgctgagcg gcagaaagtc
     1381 gtccgccttc tggtcaagga agtcttggtc gacaatgaca cgatcacgat ccggcactcg
     1441 atccccgccc aagcaccgac gccacccgcc ggcggcacgc cgctaccgtc aaacggcaaa
     1501 ctgccggtgc gcgatgaaag ttaccttttg cgttcgggga gtgctgagcc ctatgcttgc
     1561 aaatttggtt gtccgaccct tggatgaacg acttgatgca ctcgcacggg cccggggctg
     1621 ggtctacacg cgctatgccg atgatcttgc gttctccact cagggatcct ccacacgcgg
     1681 acgtgtaatg gcgctggctt ca
//
LOCUS       DATILV010000442         1650 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2662664, whole genome shotgun sequence.
ACCESSION   DATILV010000442 DATILV010000000
VERSION     DATILV010000442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1650)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1650)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1650
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2662664"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(77..1387)
                     /locus_tag="VLJ17_10045"
     CDS             complement(77..1387)
                     /locus_tag="VLJ17_10045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008137450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004197 - cysteine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="caspase family protein"
                     /protein_id="HSV23357.1"
                     /translation="MHRDVLFAFFAAVFFSVFATPAFADNRVALVIGNSAYARVPYLP
                     NPVHDAEDVAAALTRSGFETIVATDLDKAGMDEAMIKFARAARTADVAMFYYTGHALQ
                     FGGINYLVPVDAQLDDEADLRRLVRVDDVIADMQPAKNLRILVLDSCRDNPLAEQLKR
                     SIGTARSASIGRGLAKIDSPEGMIVSYATQPGRTAEDGNGRNSPYTTAFLRNVEAKEE
                     IGTIFRRISAEVYQTTHQMQLPELSLSLIGEFYLNGKLQITATPATTPAPVDPCAAAS
                     DHWKSAEAINTKAAYEDHLARFPTCSFADLARTKIAALTTPDSAKDRRRFDGLWLGKL
                     VCESTASGLPGFEREFGGRVKDGVFHAETGRVGKPGSQIFDGTIEPDGTADILQKGWS
                     GAKDPFHRPLGTEFNNRFLTKFDGSHASGTRPDRPSCNVNLTKR"
BASE COUNT          350 a          463 c          470 g          367 t
ORIGIN      
        1 tcgggtaaac ccgagttgga tgggagaggt gaaccgagtt cgtggctcga aatcgagtca
       61 acaaaactca tcgcgtctag cgtttcgtga gattcacgtt gcaagagggg cggtcgggtc
      121 tggtgccact tgcatgagaa ccatcgaatt tggtgagaaa cctattgtta aattctgtcc
      181 caagggggcg gtgaaaagga tccttcgcgc cactccatcc tttctgcaga atatctgcag
      241 tcccatcggg ctcaatcgtc ccatcgaaga tttgtgagcc cggcttaccg acccgacccg
      301 tctccgcatg gaagacgccg tctttgactc ttccgccaaa ttctctctca aagccaggca
      361 gtccagaagc cgtggattcg cagacaagct ttcccagcca gagtccgtcg aagcgtcgcc
      421 ggtcttttgc cgagtccggt gtcgttaatg cagcaatttt ggttcgggca aggtccgcga
      481 acgaacaggt cggaaagcgc gcgagatgat cttcatacgc cgcttttgtg ttgatagcct
      541 cggcactctt ccaatggtcg cttgcggccg cgcaaggatc gactggggca ggcgttgttg
      601 ctggcgtcgc ggtgatctgc aatttgccgt tcagataaaa ctctccgatc agcgacaagg
      661 acagctctgg aagctgcatt tgatgggtcg tttgataaac ctcggcgctg atgcggcgga
      721 aaatggtgcc tatctcttcc ttcgcctcga cgttcctcag gaacgccgtg gtgtaggggc
      781 tgttgcgacc gttgccatct tcagccgtgc gcccgggctg tgtcgcatag gagacgatca
      841 tgccctctgg gctatcgatt ttcgcaagac ctcgtccaat gctggcgctg cgggcagtcc
      901 cgatggagcg tttcaattgc tcggcgagtg ggttgtcgcg gcaagagtcc agcacgagga
      961 tgcgcaagtt cttcgcgggc tgcatgtcag cgatgacgtc gtcgacccga actaggcgcc
     1021 gcaggtctgc ctcatcgtct aattgggcat ctaccggcac aaggtagttg atccctccga
     1081 actgcagcgc atgcccggtg taatagaaca tcgccacgtc ggcggtgcgc gccgcccggg
     1141 caaacttaat catcgcctca tccattccgg ccttatcgag atcggtcgca acgatggtct
     1201 caaagccaga tcgcgtgagg gcggcggcta catcttctgc gtcgtgcacc ggattcggca
     1261 ggtacggtac acgagcatag gcgctattgc cgatgacaag tgcaactcga ttgtcggcga
     1321 aagcaggcgt ggcaaaaacg ctgaaaaaca cagcagcgaa aaaggcaaat agcacgtctc
     1381 ggtgcataag cccctcccga aggatacaag caattaatat tacactctgc tgtgttcgga
     1441 aacgtgagaa gcatcacgga tgcgatatcg cttcaggttg gttcatggca cctagcggac
     1501 atgccgaccc tccgcctgat gtctgctttc gcaggtagac cggacatgcc gttcaagtgg
     1561 gccaacttcc gcttatgacc cctagcggac atcggccggc ctcacctcga acccttctaa
     1621 tgtgctagtt tgaacatagc gaagcccagc
//
LOCUS       DATILV010000443         3451 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2151262, whole genome shotgun sequence.
ACCESSION   DATILV010000443 DATILV010000000
VERSION     DATILV010000443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3451)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3451)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3451
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2151262"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            181..480
                     /locus_tag="VLJ17_10050"
     CDS             181..480
                     /locus_tag="VLJ17_10050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010913605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23358.1"
                     /translation="MGNSQKRAIQNYRSRLSERGLARFEVLGRNADRDLIRSVARRLA
                     EDGPEASRLRAAVSQTIAVEPPKRGGILAALRRSPMVGADLDLTRAREEGRKVDL"
     gene            480..908
                     /locus_tag="VLJ17_10055"
     CDS             480..908
                     /locus_tag="VLJ17_10055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020049764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HSV23359.1"
                     /translation="MRYLLDTNILSNVTKPVPSEALLTWMSSQADTDLFIASLTVAEI
                     RRGVLEKPAGKKRDQLEAWFSGPEGPQALFAGRILAFDEKASLVWARLMAEGKAKGRR
                     RSGLDAIIAAVAEVNECVVVTDNEKDFEGIEIVNPLRGSA"
     gene            complement(883..1344)
                     /locus_tag="VLJ17_10060"
     CDS             complement(883..1344)
                     /locus_tag="VLJ17_10060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23360.1"
                     /translation="MQTTFRYPGTLAYVTGTFFNDPEVDVVYGHRIVIDGDGMETGRC
                     VLPGHDPETIKWMEYVPQETMFWRRRVWDRIGPLDESFRFALDWDFILRAHQAGFRFQ
                     RLPRFLGCFRVHERQKTTAMRRVAEVEPVGFGLWRSRALDIADFMPNPATD"
     gene            complement(1345..1524)
                     /locus_tag="VLJ17_10065"
     CDS             complement(1345..1524)
                     /locus_tag="VLJ17_10065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23361.1"
                     /translation="MVQDNNSIDDTAELLTDIGYRTSKLMQEPQRLIVRTEADGGQAD
                     AINRGFAAVPRSWRI"
     gene            complement(2088..2939)
                     /locus_tag="VLJ17_10070"
     CDS             complement(2088..2939)
                     /locus_tag="VLJ17_10070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23362.1"
                     /translation="MMELRRKCDDVHTAARPILRKPGVPIIFVQAGDFNNVGAKGFLD
                     IALRQAALASPESDIIILTDMERPGLPKIIQVPLDEHHDAALHFKQLYRHTSANGFDY
                     ELFCFTRWFCIRDFVRRHGIARFCIFDCDVLLFSPVETFVAAFGDHPAGNWSWANTIS
                     SRAIDLICGHFEAVFQDRRLFASITEKYRVGAAPHVSDMVALFDLADRDSTFLNQHTL
                     LGDGFDDNINSSSGGLFAMDGPIKALTVGADGIPLAWRARDGVVVPFHFLHFQGTAKT
                     LMAKFAW"
BASE COUNT          756 a          995 c         1027 g          673 t
ORIGIN      
        1 gtcgccgaat tttctggcca ttgcgaccgg agtctgttgc tccgaccggc gtcagcgcgt
       61 ccatagcaga gtctgacctg cggtcgctag ctaccagcaa taccgctgca cggcgggccg
      121 tgcccatctt gcggaatcgc ccgctctgga tatattactg gaaatcagta ggaggtcacg
      181 atgggcaact cccagaaacg cgcgatccag aattaccggt ctcgcctcag cgagcgcggt
      241 ttggcgcgtt ttgaggtgct tggccgcaac gctgatcgcg atctcatccg gtcggtggcg
      301 cgccgcctgg cagaggatgg tccggaggca tctcggctcc gtgcagccgt aagtcagact
      361 atcgccgtgg aaccgcctaa gagaggcgga atcctagcag cgcttcgccg ctcccccatg
      421 gtaggcgcag acctcgacct cactcgtgcc cgcgaggaag gtcgcaaggt cgatctttga
      481 tgcgatacct actcgacaca aatatcctca gcaatgtcac caagcctgtg ccctcggaag
      541 cgctgctcac ttggatgagc agccaagccg acacagatct gtttatcgct tcactgacgg
      601 tagctgaaat ccgtcgtggc gttcttgaaa aacccgcagg caagaagcgc gatcagcttg
      661 aggcatggtt ctcaggcccc gaggggccac aggccctctt tgcgggccgt atccttgcct
      721 tcgacgagaa ggccagcctg gtatgggcgc gtctgatggc cgaaggaaag gcgaaaggtc
      781 gccgtcgaag tggtctcgac gccatcatcg ccgcggtcgc cgaagtgaac gaatgcgtcg
      841 tcgtcaccga taatgagaaa gattttgagg gcatcgagat cgtcaatccg ttgcggggtt
      901 cggcatgaag tcggcgatgt cgagagcgcg tgacctccat agcccaaagc cgaccggctc
      961 gacctcagcg actcgccgca tggcggtggt cttctgtcgc tcatgaaccc tgaagcatcc
     1021 caggaagcgc gggaggcgct ggaaccggaa gcccgcttgg tgagctcgga ggatgaaatc
     1081 ccaatctaag gcgaagcgga aactctcgtc gagggggccg atgcgatccc acacgcggcg
     1141 acgccagaac atggtttcct gcgggacata ctccatccac ttgatggtct ccggatcgtg
     1201 ccccggtagg acgcagcgtc ctgtctccat gccgtcgccg tcaattacga tgcggtggcc
     1261 gtagacaacg tcgacttcag gatcgttgaa aaatgtccct gtcacatagg cgagtgtgcc
     1321 ggggtagcgg aatgtcgtct gcattcagat acgccatgat ctcggcaccg cagcaaatcc
     1381 gcggttgata gcgtcagcct gaccgccgtc ggcctcggta cgcacgatca ggcgttgcgg
     1441 ttcctgcatc agcttcgatg tcctataccc gatgtccgtg aggagttcgg cggtgtcatc
     1501 gattgagttg ttgtcctgca ccacataggc gaggttcgga taggattgtt gaccacgctc
     1561 atgatggaat cgccgagaaa tgccgcatag tcgcaggacg gcgtgacgat ccctattcgc
     1621 ggcgcgtgca acggtagagg tgactccacg aaggccgcgc tcaactcctt cacctcccgc
     1681 ggctcatacc ggacgaactg ccaaagcttc ggttggaatt tcgcgcgcca agagcggcgc
     1741 accaacggcc cgaccaactc gcggagattt ctgaggttgt tctcagcggc atcgatgcga
     1801 cgcaagagct gttcgttctc gctttcgatc ataacgcacc ccaacacacg ctgctgggct
     1861 acaagctacc aacagatgcg tgaaatctaa gtcagataag cagcgcaaaa gcgccctata
     1921 cgggctgtca aacctcaaga atccaccgct gtcgcggccg gcgggaacaa tctgggattg
     1981 gggcggcggc acatgccgcg atcatcgccg cccactcaag gtcagttctg gtggggcctt
     2041 tgaactagcg tccgacgttg tcgtgcgcga gatacaggtt tagccagtta ccatgcgaat
     2101 tttgccatca gggttttggc cgtgccctgg aagtgtagaa aatgaaatgg caccacgacg
     2161 ccgtcgcggg cacgccacgc cagcggaatg ccgtcggcgc cgaccgtcag cgcttttatt
     2221 gggccgtcca tcgcaaacag gccgccggaa gaactattga tattgtcgtc gaagccatca
     2281 ccaagcaacg tgtgctgatt gagaaatgtc gaatcccggt cggcaaggtc gaacaacgct
     2341 accatatccg acacgtgcgg agcagcgccg acgcgatatt tttccgttat gctggcgaac
     2401 agccgcctat cctgaaaaac ggcctcgaag tgtccgcaga tcaggtcgat ggctcggctc
     2461 gatatcgtgt tcgcccatga ccaattaccg gcggggtgat cgccaaatgc cgcgacgaaa
     2521 gtttcaacag gtgagaacag cagcacgtcg caatcgaata tgcaaaatcg ggcgatgccg
     2581 tgtcgccgca caaaatcccg aatacaaaac cagcgtgtga agcagaaaag ctcgtagtcg
     2641 aatccatttg cgctggtgtg ccggtagagt tgtttgaaat gcagggcggc gtcatgatgc
     2701 tcgtcgagcg gcacctggat gatctttggt aggcccgggc gctccatgtc agttaaaata
     2761 atgatgtcgc tttccggcga ggcaagcgcg gcctgccgta gagcaatatc cagaaaacct
     2821 ttcgccccaa cgttattgaa gtcgccggcc tgcacgaaga tgatcggcac accgggcttt
     2881 cgaagtatcg gccgcgccgc ggtgtgcacg tcgtcgcact tgcggcgcag ttccatcatt
     2941 ttcgacctgc ctcccgggtg cccggccggc cgcaataaac cacgcctcgt ggcaaaatga
     3001 aagacggcca gcgagctgca aaaaaaatca cgccggccat cccgttggga tccggattgt
     3061 ccatagcttt gcggcagcac gctgctgtca atgcgcggat cgagatcgcg atagtataga
     3121 gcacaacagc cacccatcca tcgggcagaa cgtcgtggat aaacaaaaga tcgacaaggc
     3181 tgtaagcttg gtgtttgcaa accggcacag gagcggaggt ctgttctggg gcatcgaacg
     3241 aacccgctcg cgcgggaacg cgctgcgcgc tgagcggagc aagcggcgag ggtggcgcta
     3301 accaagtcat agacatgcga ggacgggaag ggcatcccgt cctgaggatt gggggttcca
     3361 acgttcatgc aaggaactcc tcaaggcaac agaatgcgtt gtatatagag ccggagatgc
     3421 tgagcgttcg caaagcatta ttctgtttct g
//
LOCUS       DATILV010000444         5350 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_361165, whole genome shotgun sequence.
ACCESSION   DATILV010000444 DATILV010000000
VERSION     DATILV010000444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5350)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5350)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5350
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_361165"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(288..1067)
                     /gene="cobS"
                     /locus_tag="VLJ17_10075"
     CDS             complement(288..1067)
                     /gene="cobS"
                     /locus_tag="VLJ17_10075"
                     /EC_number="2.7.8.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008818 - cobalamin 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobinamide-GDP ribazoletransferase"
                     /protein_id="HSV23363.1"
                     /translation="MTTSGGWVSGLAVDLKVSILFCTRLPLPHSAPIDSSDVARASWA
                     FPFAGALVGGVGALAYEAALKGGLPPMLAAALALTATLVVTGCLHEDGLADAADGFGG
                     GRRRERKLEIMRDSRLGTYGACALAMSFILRWTAVAAIASPMLVAWALIAAHVSARAA
                     LPAFMRFVPPARPDGLSAQTGQPTPLCVAVAVLLGTLTLGIALGGAAAATGVILAASA
                     SLFMAWLSMRQIGGQTGDVLGALEQIIEVVILLTAVATWRT"
     gene            1331..2344
                     /gene="cobT"
                     /locus_tag="VLJ17_10080"
     CDS             1331..2344
                     /gene="cobT"
                     /locus_tag="VLJ17_10080"
                     /EC_number="2.4.2.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008876543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008939 -
                     nicotinate-nucleotide-dimethylbenzimidazole
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide--dimethylbenzimidazole
                     phosphoribosyltransferase"
                     /protein_id="HSV23364.1"
                     /translation="MHFPSFAALRKTCLDLPPGDATAAATAAGRDAMLTKPPGSLGRL
                     EDLAVWLAQWQARNPPRLERIEVLVFAGNHGVVAQGVSAFPADVTAQMVANFAAGGAA
                     INQLAAVAGAQLHVVPLDLDRPTADFTAAPAMDEDEFLRAVAIGYDTVPIAADLVCLG
                     EMGIGNTTAAAAIAAALFGGGGARWAGRGTGVDDHGLARKRAAIDMALRRHADILDDP
                     LHVAATLGGRELAAILGAALAARRQRIPVLIDGFVCTAALAPLAKLGANGLAHAVAAH
                     VSAEAAHRTLLEELGLKPLIDLGMRLGEASGAAVAALILRAAVACHAGMTTFAEAGVS
                     DKL"
     regulatory      complement(2495..2700)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            2869..3933
                     /gene="cobD"
                     /locus_tag="VLJ17_10085"
     CDS             2869..3933
                     /gene="cobD"
                     /locus_tag="VLJ17_10085"
                     /EC_number="4.1.1.81"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006203282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0048472 - threonine-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine-phosphate decarboxylase CobD"
                     /protein_id="HSV23365.1"
                     /translation="MVFALLHGGNLGAARQQFPDAPEPFIDLSTGINPHSYPLPRLSS
                     DIFARLPEPAALDQLAATAAMAYGAPSLDHVVPAPGTQILLAPIMTLVPPGRAGVLGP
                     TYTEFSRVAALVGHDVVDVTDIGQLQDVDLAVVVNPNNPDGRVFNKRELLDLAGARKH
                     RGLLVIDEAFMDVGPVGASLCGEAAKTSIVVLRSFGKFFGLGGLRLGFALAAPEIAER
                     LAAALGPWAVAGPAIAIGQAALADDAWSKAMRERLQVEARRLDALLIEVGVEVIGGTS
                     LFRLVRTSVADQLFHHLGRAGILVRRFPEHTAWLRFGLPASEAAWDRLRAAFADWRVE
                     CNPSSPSPRLIPGKRQCNEH"
     gene            complement(3880..4650)
                     /locus_tag="VLJ17_10090"
     CDS             complement(3880..4650)
                     /locus_tag="VLJ17_10090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23366.1"
                     /translation="MNDLTLVKILITPILMVAISCASRVWGGSIGGLLAGLPITSGPI
                     SIYFAAEQGIDFAIEAARSSIVGVNSVIAFYIMYVISASSLSAAITVMVSCSAFMLSS
                     TILYAVNATMAVAIMIAMAAIVLLLKVCSKRQSCNSKIIYAAWDLPARIAASTAMVLL
                     LTWFANVIGPKFSGLLAPVPVIAWPLLVFAHVQKGASEATDVVAGTAVGLVGIVVFYT
                     IVYYALARYGMALAYGAALSASVLVTLPFAWYEARRRT"
BASE COUNT         1068 a         1611 c         1605 g         1066 t
ORIGIN      
        1 cgcggtcgag atcatcccat cgggcaaagg gcgtgctgtc cacaggcggc cgctcgagca
       61 ggagcgcgct attcgcgctt ttctcaaatc ggcacgcaca aggcccggag actcctcggg
      121 aaagcgccgc cggacgcgcg acgaattgca tgagcgctga acgtttcacg ctcaacacca
      181 acattctggt ctatgccgcg gacgcccgcg agggacgcaa acgcgaattc gcaacgccat
      241 tatagaggct gcggtcgggc tagattgtcc actagcccga actttgacta tgtcctccac
      301 gtcgcgacag ccgtgagcaa aatgacgacc tcgatgatct gctccagcgc tcccagcacg
      361 tcaccggtct gaccgccgat ctgccgcatg ctcagccacg ccatgaaaag cgaggcagac
      421 gcggcgagga tgacacctgt tgccgctgct gcgcctccga gcgcgatgcc aagcgtgagc
      481 gtgccgagga gaaccgcaac ggcgacgcat aacggtgtcg gctgacccgt ctgagcagac
      541 agtccgtcgg gtcgggctgg gggaacgaaa cgcatgaacg ccggcagtgc tgcacgggcc
      601 gatacatgag ccgcgataag cgcccacgca accagcatgg ggctcgcaat ggcggcgacc
      661 gcagtccagc gcaggatgaa cgacattgcg agagcgcagg ctccgtaagt gccgagccga
      721 ctgtcgcgca taatctcgag cttgcgctcg cggcgtcgcc cgccaccgaa gccgtcggct
      781 gcatcggcga gcccgtcctc atgcaggcaa ccggtaacca caagagttgc tgtgagcgca
      841 agtgcggctg caagcatggg cgggagtcca cccttcaagg ctgcttcata ggccagtgcg
      901 ccgacgccgc ccaccaacgc gccggcgaac gggaacgccc agcttgcgcg agcaacatcg
      961 ctgctgtcga ttggagctga atgagggagc ggcaggcggg tacagaacaa aatgctgact
     1021 ttgaggtcga cggcgagacc gcttacccat ccgccggatg tcgtcatcgt gggtctccgg
     1081 tttgctcagc cgccttgacc aagaatttta gcgcagcaag ctgcgggatt tcacgccgga
     1141 gataggcgct gaggcgcgtt ggcgccaata tgaatctgat tgcgggtttc tctgccgttc
     1201 gatgtattgg cgaatgatgc tgatgggcgc accgccacag gatgcagcaa aatagcgcga
     1261 tcaattttgc tggacagacg gccgtgaaaa gccgaatttc cagcgaacgc aaaatatccc
     1321 gcccgccacg atgcacttcc cgtccttcgc tgcgttacgc aaaacctgtc ttgatctccc
     1381 gcctggcgat gctacagcgg cagcaacggc ggcgggtcgt gacgcgatgc tcaccaagcc
     1441 gccaggtagt ctcggtcgcc tggaggacct cgccgtctgg ctcgcacaat ggcaagcgcg
     1501 aaatccgccg cgccttgagc gtatcgaggt gctggtattc gccggcaatc atggcgtggt
     1561 ggcgcagggc gtctcggcat ttccggccga cgtgacagca cagatggtgg cgaatttcgc
     1621 cgccggaggt gccgccatca atcagcttgc cgccgtggcg ggggcccaac tgcacgtcgt
     1681 tccccttgat ctcgatcggc ctaccgcgga cttcaccgcg gcgcccgcca tggacgagga
     1741 cgaatttctc cgcgccgtcg caatcggtta tgacaccgtg ccgatcgccg cggacctcgt
     1801 ctgcctcggt gaaatgggca tcgggaatac gacggctgct gccgcaatcg cagcggcctt
     1861 gttcggcggc ggcggcgcac gttgggccgg gcgaggtacc ggtgtcgatg atcacggtct
     1921 cgcccgcaag cgtgccgcaa ttgatatggc gctgcggcgt catgcagata ttctcgatga
     1981 cccgctgcac gtggcggcca cgttgggagg gcgagagctt gccgccatcc tcggcgctgc
     2041 gctggctgcc cgccgccagc gtattccggt gctgatcgac ggctttgtgt gcactgccgc
     2101 cctcgcacct cttgccaagc tgggggcaaa tggactggcc cacgccgttg cggcccatgt
     2161 atcggcggag gccgctcacc ggaccctcct cgaagagctt ggcctcaagc cgctgattga
     2221 tctcggcatg cggctcggcg aagcttcagg cgcggcggtg gcggcgctca tcttgcgcgc
     2281 cgccgttgcg tgccacgccg gaatgacgac cttcgccgag gccggcgtat cggataagct
     2341 atagtcatac gtgcgcaatt tgcatgaaag aacgtgccgg tgacatggcc gcgccgaccg
     2401 ccggcattat tgagcggggt gctcggacgg cgtcaaaccg aggctcggtc tatatcagcc
     2461 gctacaactc gaccgcgccg aggcaccccg cccggcacgc gttcgaatcg acggcaggtc
     2521 tcctggctcg cgggtcaccg cccggcaccg ccttcccggg tttccccagt ggcactgtgg
     2581 tatgggctcg ccgcttacag ttgcggaggc agctgcggca ttggaaccag agtggatcgg
     2641 cgttccgcac cgcattccct gttgtccctc tgtcgagaga ccgtcgattg tcgccactta
     2701 acgatcgcgg cgcatggttt gtcaatgtaa tcgttgaaag tatctaagcg gtgataccaa
     2761 cctgcacttc gatgtcgccg caaggccaat tggctccatc caaccagtcc gggtaactca
     2821 atcaagtcct taatcggaag ggcaaacaaa cgctagcggg aacgatttat ggtattcgcg
     2881 ctcttgcacg gtgggaatct cggcgccgca cgccagcagt ttccggacgc cccggaacca
     2941 ttcatcgact tgtcgaccgg gatcaatcct cattcctatc cgttgccacg gctctcctcg
     3001 gacatatttg cgcggctgcc cgaaccggcc gcgctcgacc agttggcagc caccgcagcg
     3061 atggcgtatg gggcgccatc actggatcac gtggttccgg ctcccggaac gcagattttg
     3121 ctggccccga tcatgaccct ggtgccgccc ggacgcgccg gcgtgctcgg ccccacctat
     3181 acggaattca gccgcgttgc cgcactggtc ggccatgacg tcgttgacgt tacggacatt
     3241 ggccaactgc aggacgtcga tcttgcagtg gtggtcaacc cgaacaatcc ggatggacgg
     3301 gtcttcaaca aacgcgaact gcttgatctc gccggtgcgc gaaagcatcg cggcctgttg
     3361 gtcatcgacg aggcctttat ggacgttgga cctgtcggag cctctctgtg tggcgaggct
     3421 gcaaaaacca gcatcgtggt gctgcgatcg tttggcaaat tttttgggct tggcggattg
     3481 cgactcggat tcgcgctggc ggcgccggaa attgcggaga gattggccgc ggccctcgga
     3541 ccatgggcgg ttgcaggacc tgcaatcgcg atcggccaag cggccctagc ggatgacgcg
     3601 tggtccaaag cgatgcgcga acgtcttcaa gtggaagcgc gtcgcctcga cgcgctgctc
     3661 attgaggtcg gggtcgaagt catcggagga acgtcgctgt ttcggcttgt gcgcacgtcc
     3721 gttgccgatc agcttttcca tcatctggga cgtgctggca ttctggtacg tcgatttccg
     3781 gagcatacgg cttggctgcg gtttggactt ccggccagcg aagccgcctg ggaccggctt
     3841 cgcgcagcgt ttgcggattg gagagttgag tgcaacccgt caagtccgtc gccgcgcctc
     3901 ataccaggca aacggcaatg taacgagcac tgaagctgaa agcgcagcac cgtaagcaag
     3961 cgccatgcca taacgcgcga gagcataata tacgatggta tagaaaacaa cgattccgac
     4021 caatcccacc gccgttcctg caacaacatc ggttgcctca ctcgcccctt tttgcacatg
     4081 agcaaaaacg agcaagggcc acgcgatgac aggaactgga gccagcaggc cgctgaactt
     4141 aggcccgata acgttggcga accaggtgag cagcagcacc atcgcggttg atgctgcgat
     4201 gcgagcgggt aagtcccacg ctgcataaat aatcttgcta ttgcatgatt ggcgttttga
     4261 gcagacttta agcaggagaa ctatcgcagc catcgcaatc attattgcca cagccattgt
     4321 tgcgtttacg gcgtaaagta ttgtgctgct tagcataaac gcagaacagc tgaccatcac
     4381 cgttatggct gcacttaaac tgctagcaga tatgacatac atgatataaa aggcgattac
     4441 tgaattgact ccaactatcg agcttcgagc cgcttcgata gcgaagtcaa ttccctgttc
     4501 tgctgcaaag tatattgata tcggtcccga cgtaataggc aggcctgcta aaagtcctcc
     4561 aatactgcct ccccagacgc gtgatgcgca agatatcgct accatcaaaa ttggggttat
     4621 caggatcttt acgagtgtca gatcattcac attcggagac tctgatatta atggtgagca
     4681 tcttgcgcaa tgtacgcggt gccggctact cgaagggaaa agtcaggcta cgttgcggag
     4741 cgtgatcatg tctgaggatt gcgcctgctc cattttgtcg accacatggt gccagaagtt
     4801 gagacggagg cggttcaggc gtgtcacttc agccagtacg gctgcaagct atcgatgctc
     4861 agcgactgta gaagttccac cgcttccacg tgagcgtcct cggcgtggcc cacttcggcc
     4921 gcgctttgcc atccgacgga ttgccctacc tgctcatcgt tatgggcctt aacccgggcc
     4981 aactcccggt cccgttgcgg agctcttttc gcctggccca ggcgcaatgg gctgacctgt
     5041 ccgcggagcg gcgacttgct ggctcctact cgccttccag caggtcgaac atggcatgca
     5101 tttagtgctg gtaacaaatc taaagttgta ggaaaatcaa tcccttacac actatgtcgt
     5161 atgtgaaaca cgggaaagtt ctaatttctt gcatttcgaa agggttgtgg tactttcgcg
     5221 tatctgatat gcgcgaaagt gagaaatgtc cctgtacctt gttggcgaga acctcgacaa
     5281 gaagcgcggc cactaccggg ctcagacagg taagctcgtc cagctggtgc gtggcatcta
     5341 cgttgatccc
//
LOCUS       DATILV010000445         5036 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_616628, whole genome shotgun sequence.
ACCESSION   DATILV010000445 DATILV010000000
VERSION     DATILV010000445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5036
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_616628"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..456)
                     /locus_tag="VLJ17_10095"
     CDS             complement(139..456)
                     /locus_tag="VLJ17_10095"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSV23367.1"
                     /translation="MKRMVALAALLITVTAGLVHAQDVSERLKGASFVHQICAECHAV
                     EAGQAQSPNGQAPTFETVAKTPGMTAIALTAILRTSHRTMPNIMLADDDLRNVIAYIM
                     TLK"
     gene            584..910
                     /locus_tag="VLJ17_10100"
     CDS             584..910
                     /locus_tag="VLJ17_10100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018644782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HSV23368.1"
                     /translation="MKPSELTLKLFGWWVTAAIIVQPALAADATNGERLARRWCEPCH
                     VVAADQRQATGEAPPFASIATRPGFDAARIATFLLDPHPKMPDMSLTRIEAADLAAYI
                     ATLARQ"
     gene            922..1242
                     /locus_tag="VLJ17_10105"
     CDS             922..1242
                     /locus_tag="VLJ17_10105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013215083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSV23369.1"
                     /translation="MWRRSLGLYFVLAVTPVAADDAAAVKRGEALLAKNCSRCHAIAS
                     TGESQHPQAPPFRTLGKRYPVEFLEEALGEGIISGHPDMPEFEFAPADVRAIVAYLKA
                     IQER"
     gene            1747..2403
                     /locus_tag="VLJ17_10110"
     CDS             1747..2403
                     /locus_tag="VLJ17_10110"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV23370.1"
                     /translation="MSNSLRIAIIDDHPLFRDGVVSTLTSADGIEVVAQGATAGDALR
                     IAQEHCPDVMLLDVGIAGDGIEAAASLTRAHPDVRIVMLTASEDERHVASALEAGVRG
                     YILKGSSGDDLVEAVRTIAAGDSYVAPNLAARLLLKKSDRIETATSDHRHNLTPREAE
                     LCAFLERGMSNKEIARAFKCTERTVKHHMTHIMQKLNVRNRLQAVVKLQAGRRRSTDR
                     "
     gene            complement(2430..2711)
                     /locus_tag="VLJ17_10115"
     CDS             complement(2430..2711)
                     /locus_tag="VLJ17_10115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23371.1"
                     /translation="MSNQFMSVENAGYPTIWTVYRHPNDYPGCWVMRAYEILPGIGTR
                     PHSFCFIGKTLDEVRAKVPAGTWRIGREPNDNPAIYESWIAETFTSYPH"
     gene            complement(3177..4373)
                     /locus_tag="VLJ17_10120"
     CDS             complement(3177..4373)
                     /locus_tag="VLJ17_10120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015685198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HSV23372.1"
                     /translation="MASDSILIAGAGIGGLTAALALARRGFRVTVFDQMEKLEEAGAG
                     IQLAPNATRILVALGIAERLEPTIVQPRAIRLRSGPSGREIAAMPLDAAALARYGAPD
                     WVVHRADLHKALIEAVAGEPHITLMLGATVSNFTTDTIGVCTTVHHSSEGRTKADYVG
                     AALIGADGLWSRMRALLGDDTAPRFAGRGAFRAIVPAAQLSPQEREPVVNMWIGPGGH
                     LVHYPVRAGAAVNIVAVCGDQWQSPAWNTSAERKEVLERFPSTAWAPATRQLLARPER
                     WQKWALYDRRPSTSWGRGLVTLLGDAAHPMLPFLAQGASMAIEDAAVLAHEIARSAGN
                     LDPALRNYESVRWPRTARVQRASRRSDFHFHLRWPAAPVRDTALWALGGQRLLAKYDW
                     IYQWRP"
     gene            complement(4512..>5036)
                     /locus_tag="VLJ17_10125"
     CDS             complement(4512..>5036)
                     /locus_tag="VLJ17_10125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23373.1"
                     /translation="IGVIFVGVAPTLSAFNGNFGSQNNRHLDVRKAEEKTKKEAEAEA
                     KVKEPREGEVNRQQEAEAKVARQASQLQFLYTYYIWMEICAERFAQFDNTKVELREIL
                     RDKEANIPPERAESVWNVTAEKFQQLEGVLKIAGDVQLYADCDQNSRYIEGFLTLASQ
                     MHGPSPPLLRKRDF"
BASE COUNT         1007 a         1481 c         1503 g         1045 t
ORIGIN      
        1 ccacattcgc ggccgtccac gacccggctg ccgcgagttc caggcggtcg gcattcatca
       61 cgctggtcat gagcggcggg gtcatggttg cctgctgccg atccgggagc cgggacagcc
      121 cggcgcatcg gggtccattt atttaagggt catgatgtac gcgatgacgt ttcgcaaatc
      181 gtcatcggcg agcataatgt tcggcattgt gcggtgagag gtacgcagga tcgcagtaag
      241 agcaatcgct gtcatgccgg gggttttcgc cacggtttca aacgtcggcg cctggccgtt
      301 gggcgactgc gcctgtcccg cctcgacggc gtgacactcc gcgcaaatct ggtgtacaaa
      361 gcttgcgccc ttcaaccgtt cagagacatc ctgtgcgtga accagtcctg ccgtgactgt
      421 aatgagcaat gctgccaagg cgaccatgcg tttcatcggt gtgcctccat tttgacgaca
      481 tctatagggc cgatgcagtc tgtttggcct tgatccaacg caaagcgcgg cgctgaaaac
      541 gggttcaaaa aggatcggga ttggaaaaga gggactgtga tctatgaagc ctagcgaact
      601 taccctgaag ctcttcggtt ggtgggtgac ggcggccatc atcgtgcagc cggcgcttgc
      661 ggccgatgcc accaacggcg aacggcttgc gcgccggtgg tgcgagcctt gccatgtcgt
      721 cgccgccgac cagcgtcagg cgaccggcga ggctccgccg ttcgccagca ttgcgaccag
      781 acctggattt gatgcggcga gaatcgcgac gttcctcctc gatccgcacc cgaaaatgcc
      841 ggacatgtcg ctgacgcgca ttgaggcggc cgatcttgcc gcttacatcg ccacgttggc
      901 ccgacagtag ggaggtgccg catgtggcgt cgatcgctcg gcctctattt cgttctcgcg
      961 gtgacgcctg ttgccgctga tgacgcggca gcggttaagc ggggggaggc actccttgcc
     1021 aagaattgct cgcgctgcca tgcgatcgct agcaccggtg aaagtcagca cccgcaggcc
     1081 ccgccatttc gcactttggg aaagcgctat cccgtcgagt tcctggagga ggcgctaggc
     1141 gaagggatta tctccgggca tccggacatg ccagagttcg aatttgcacc cgctgacgtg
     1201 cgtgccatcg tggcttatct caaagccatt caggaacgct aaaacaaggt gacataaccg
     1261 gccgggcgcc gttgcgggcg gctttccctg cgcgccgagc tcctccagca ggctttcagc
     1321 ctttcgcggt caccgaccgc aacggactcg gcggcgaaaa cgtgcggtcg ggaaaggcgc
     1381 ctgcctcacg gttcctccgt cgctgcccta agctcaccgg ccaccacctc tgggcaacac
     1441 cacctcgcgg ccgacgcggt cccgcaccag cgcattgacg cgtgccgcga tccgcggttc
     1501 ctggtcggct caggacgatt aaaaataccg cataagaggc cgcgatcact tgcgtgaaaa
     1561 tacttaaggg tctggtctac tgtttcagag tagatggggc gattatctta aatacgtaaa
     1621 gcaaagggag acttgccggg atatcggatc gatgatcggc ctttgcgctc gaaggccagc
     1681 gcaggtctgc gtagccgaaa aacccaatcg tgcgattgag tttcctcgct catatgggag
     1741 ggggaaatgt caaattcact ccgcattgct attattgacg accatccgct gtttcgtgat
     1801 ggtgtagtca gcacgctgac gagcgcggat ggcattgagg tagtggcgca aggagccact
     1861 gcaggtgacg ccctccggat cgcccaggag cactgtccgg acgtcatgct gcttgatgtt
     1921 ggcatagccg gagacggcat cgaagccgcc gccagcctaa ctcgtgccca tcccgatgtc
     1981 cggatcgtca tgctgacggc ttccgaagac gagcgccatg tggcatctgc gctagaggct
     2041 ggggtccgag gctacatctt gaagggtagc agtggagatg atcttgtcga ggcggtgcgc
     2101 acaatcgccg ccggcgactc ttatgtggcg ccgaatctcg ctgcacgatt gctgttgaag
     2161 aagagcgacc ggatcgaaac tgcaaccagt gaccatcgcc ataatcttac gcctcgtgaa
     2221 gcggaattgt gtgcattcct tgagcggggc atgtcaaata aggagatcgc acgcgccttc
     2281 aagtgcacgg aaagaaccgt gaagcatcac atgacccaca tcatgcaaaa gctgaacgtg
     2341 cgaaatcgcc tccaagcggt cgtgaagctt caggccggac gacgtagaag caccgaccgt
     2401 tgatctgccg atccctcgga gaggagaagt caatgcggat atgacgtgaa tgtctccgcg
     2461 atccaggatt cgtaaatcgc cggattgtcg ttcggttcgc ggccaatgcg ccacgtgccg
     2521 gccggaacct tggcgcgaac ttcatctagc gttttaccga tgaagcaaaa actgtgagga
     2581 cgagttccga taccgggtaa aatctcgtat gccctcatca cccagcaacc cggataatca
     2641 ttcggatggc ggtagacggt ccaaatggta gggtagccgg cgttttctac tgacataaat
     2701 tgattcgaca tgacggtctc agtcgcaagg ccgtccccac ggccgtctga agcaccttac
     2761 atcggcaatc ctgacgtttg gcgtacgagc cgacgatgca agcccaaatt agtctacggg
     2821 taatattggc aatatttgga gatagggacg cagaccaagg tccgatggac catcgtccgc
     2881 gaaggatggc ggagagtttt accagcgcag ccatacctgg cgcacctgga cggacggcca
     2941 cttacggtcg cctccaggct tgattaagtg gcatgtccag cgtgagagct ttgatatcgg
     3001 ttgaaggctg ccactgctgc caaaggccca gtctttcggc ctttaaggcc agcggggcgc
     3061 cgatacgttg cgagggcgac cactgacggc tgggtcgata ctggccgggt ttcagacgcg
     3121 aaaactcgct gtcctggcga gatccaaacg aagccgcgct atgcgcggcg ggcagcttaa
     3181 gggcgccact gatagatcca gtcatatttg gcgagcagtc gttgaccgcc gagcgcccat
     3241 aacgcggtgt cacgcacggg ggcagctggc cagcgcagat gaaagtgaaa atcgctgcgg
     3301 cgtgatgcgc gctgtacgcg ggcggtgcgc ggccatcgta ccgattcgta gttacgcaac
     3361 gcaggatcga gattgcccgc tgaccgggca atttcgtggg ccagaacggc ggcatcctca
     3421 attgccatgg acgcgccttg ggctaggaac ggtagcattg gatgggcagc gtcgcccaga
     3481 agcgtcacca gcccacgtcc ccacgatgtc gaaggtcggc gatcgtagag cgcccatttt
     3541 tgccaacgtt ccggccttgc cagcagctgg cgagtcgcag gcgcccacgc ggtcgaggga
     3601 aaccgttcca gcacctcttt gcgttctgcg ctggtattcc atgccgggct ctgccattga
     3661 tcaccgcaga ccgcgacgat gtttacggcc gcgccggccc ggaccgggta gtgcaccagg
     3721 tgcccgccgg ggccgatcca catattaacg actggctcgc gttcttgcgg cgagagttgg
     3781 gcagccggaa cgattgcccg aaaggcgcct cgtcccgcaa aacgcggggc tgtgtcgtct
     3841 ccgagcagcg ctcgcatgcg cgaccataat ccatcggcgc cgataagtgc tgccccgacg
     3901 tagtccgcct ttgtgcgccc ttcgctgctg tggtggacgg tagtgcacac gccgattgtg
     3961 tcggtggtga aattgctaac cgtggcgccg agcatcaggg tgatgtgagg ctcgcctgca
     4021 accgcctcga tcagcgcctt gtgcaaatcg gcgcggtgga ccacccaatc gggcgcgccg
     4081 tagcgcgcaa gcgccgcggc gtcaagcggc atagccgcga tttctcggcc ggacgggccc
     4141 gatcgcagcc ggatggcgcg gggttggacg atggtgggct caaggcgctc ggctatgccc
     4201 aatgcaacga gaatccgcgt ggcgttcggg gcaagctgaa tgccggcacc ggcttcctcc
     4261 agcttttcca tctgatcgaa caccgtcacc cggaaacctc gccgggcgag cgctagggca
     4321 gccgtcaagc cgccgatgcc tgcgcctgca atcaatatgc tgtctgaagc cacttccgtc
     4381 tccgaagacg cgcaggtgtc gctgtcgagg tttgcttgtt gttacccgat tgagttcgca
     4441 aactcgcgag tcatttggcg agcctgttaa gcggtggtca catgcaccga tttgagcgaa
     4501 ccatcattga cctagaagtc cctttttctg agaagtggcg gagacggccc gtgcatctga
     4561 gatgcgagcg tcaagaaacc ctcaatgtag cgactgtttt gatcgcaatc tgcgtaaagt
     4621 tgaacgtctc ccgcaatctt tagcactcct tccaattgtt ggaatttctc ggccgtcaca
     4681 ttccaaacac tctccgcccg ttccggcgga atattggcct ccttgtctcg taaaatttct
     4741 ctgagctcca ccttcgtgtt gtcaaattga gcaaatcgtt cagcacaaat ctccatccaa
     4801 atatagtatg tgtataagaa ctgtaattgt gaagcttgtc gcgcgacctt cgcctcagcc
     4861 tcctgctgcc tgttcacctc accttccctc ggctccttga cctttgcctc agcttctgcc
     4921 tctttcttgg ttttttcttc cgccttgcgt acgtcaagat gacggttgtt ctgggaaccg
     4981 aagtttccat tgaacgcgct gagtgtagga gccactccca caaaaatcac cccaat
//
LOCUS       DATILV010000446         4762 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2152319, whole genome shotgun sequence.
ACCESSION   DATILV010000446 DATILV010000000
VERSION     DATILV010000446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4762)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4762)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4762
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2152319"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1792)
                     /locus_tag="VLJ17_10130"
     CDS             complement(<1..1792)
                     /locus_tag="VLJ17_10130"
                     /inference="COORDINATES: protein motif:HMM:NF012431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HSV23374.1"
                     /translation="MSRHGRDSDLSRRGLLKGATAAGVAVVGSMRETKAYAQTRTASP
                     ITPPPNSAMESGHPPEQPIVQGSSGSDYMADVIKSLGIEHVACNPGTSFRGLHESLIN
                     YLKIDWHTCLHEEASVAMANGYAKIEGKPLLVLAHGTVGLQHASMALYNAWCDRSPVY
                     MMVGNTVDATKRSPGGEWVHSVQDAAAMVRDYVKWDDLPGSLTHFGESAVRAYNIAMT
                     PPMAPVLLVLDSEMQDGPVPPNQKLVIPKLPKIAPLIGDPGAVTEAAELLVNAANPVI
                     VADRCARSQAGINHLVELAETLQCAVVDLGGRLNFPSRHVLNQSDRARAVVSQADVIV
                     GLELENFWGATHTFHDNIERYADTNIKPGTKLVSIGAAHLYVKANYQDFQRFTDIDLV
                     VPADAQATLPYLIETVQRLIPADRRAAMIARGEKLAAAHRQATKALKEDALYAWDTSP
                     IATSRLSAELWEAIRNEDWSLGSLSSNNRPQWPQRLWDMKKHYHHTGPAGGGGIGYGA
                     PAAAGAALANRKHGRLTVTIQADGDLMYSPGVLWTCAHSRLPVLYVMHNNRAYHQEMM
                     GLQRMANRRERGVDRTHIGCTLDDPFIDYAT"
     gene            1858..2124
                     /locus_tag="VLJ17_10135"
     CDS             1858..2124
                     /locus_tag="VLJ17_10135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23375.1"
                     /translation="MGVNRPTSSAWDSNSGDRAPIATVTKNYRRAQSKQPIWWHEDIC
                     AEANLHVDIGGRAYFLSADGLLMPHQERPVTAGSALFQADPEVT"
     gene            complement(2299..2541)
                     /locus_tag="VLJ17_10140"
     CDS             complement(2299..2541)
                     /locus_tag="VLJ17_10140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009800361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23376.1"
                     /translation="MADEDMKVELERLRRENAALKKGTSTNIRMKVSEKGALSVYGMG
                     RFPVTLYKEQWLKLLEMADDIRAFIAAHGGELKAKE"
     gene            2933..3172
                     /locus_tag="VLJ17_10145"
     CDS             2933..3172
                     /locus_tag="VLJ17_10145"
                     /inference="COORDINATES: protein motif:HMM:NF021431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HigB family
                     toxin"
                     /protein_id="HSV23377.1"
                     /translation="MDACFDEVKKARWSGTSDVKRSYATASMVSADRIVFNIKGNDYR
                     LVIAVDFEKSIVWIKWIGTHKDCDRIDVREVQHGG"
     gene            3162..3539
                     /locus_tag="VLJ17_10150"
     CDS             3162..3539
                     /locus_tag="VLJ17_10150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSV23378.1"
                     /translation="MADEVRPIRTKRDYEAALKEVERLWGAKAGTRDGDRLDVLATLV
                     DAYEGEHYPMDPPDPIEAIKFRMEQQGLTRRDLEAIIGTRTRIAEVLNRKRGLSIAMI
                     RRLHERLGISAEVLIRPSRKSAA"
     gene            3557..3988
                     /locus_tag="VLJ17_10155"
     CDS             3557..3988
                     /locus_tag="VLJ17_10155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008840054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23379.1"
                     /translation="MPVSFQQILEAFEFVSMGGGPGEHQAVLCRQTGKIYWHSEFSDL
                     DELNDELPDDIEDDKKYVTIPDKRELGLGKPLVLDFAREFLPNDFDEVRYIFGKRGAY
                     SGFRALLARRNAVDRWDNFESKATERALREWCELNSIALAD"
     gene            complement(4496..4729)
                     /locus_tag="VLJ17_10160"
                     /pseudo
     CDS             complement(4496..4729)
                     /locus_tag="VLJ17_10160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018644596.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
BASE COUNT          973 a         1386 c         1419 g          984 t
ORIGIN      
        1 ccgtcgcgta atctatgaac ggatcatcca aagtgcagcc gatgtgggtt cggtcgacgc
       61 cacgctctcg gcgatttgcc atccgctgca agcccatcat ctcctggtga taggcgcggt
      121 tgttgtgcat tacgtatagt accggcaatc ggctgtgcgc gcacgtccat agaacgcccg
      181 gcgagtacat cagatcgcca tcggcctgga tcgtgacggt aaggcgtccg tgcttccggt
      241 tggcaagtgc ggcaccagcc gcggcaggcg caccatagcc gataccaccg ccgccggccg
      301 gtccggtgtg gtggtaatgt ttcttcatgt cccacagccg ttgtggccac tgcgggcggt
      361 tgttgctgct gagagatccg agggaccaat cctcgttgcg gatcgcctcc cagagttcgg
      421 cggacaaccg gctggtggcg atcgggcttg tatcccaggc ataaagcgca tcctccttca
      481 gcgccttggt cgcttgccga tgggcggcgg cgagcttctc gcctcgcgcg atcattgcag
      541 ccctccgatc ggccggaatg agacgctgta ccgtctcaat aagatacggc agggtcgctt
      601 gtgcatcggc cggaacgacc aggtcgatat cggtgaaacg ttggaaatcc tgataatttg
      661 ctttcacgta aagatgcgca gcgccgatgc tcacaagctt cgtgcctggt ttgatgttgg
      721 tgtccgcata gcgctcgatg ttgtcatgaa acgtatgcgt cgcgccccag aagttctcga
      781 gctccaagcc gacaatcaca tcggcctgag aaaccacggc ccgcgcgcgg tcgctttggt
      841 tgaggacgtg acgagaggga aagttcagac gaccgccgag atctaccacc gcgcattgca
      901 acgtctctgc gagttcgaca agatggttga tgcccgcttg gctgcgagcg cagcgatctg
      961 caacgatcac tggattagca gcgttgacaa ggagttctgc tgcctccgtg acagctcccg
     1021 gatcaccgat cagcggcgcg attttcggca gcttggggat gaccagcttt tggttcggcg
     1081 gaaccggccc gtcctgcatc tcgctatcga gcacaagtag cacgggcgcc atgggcggcg
     1141 tcatggctat gttataggcg cgcaccgcag actcgccaaa atgcgtcagc gaacccggga
     1201 gatcgtccca cttgacatag tctcgcacca tagcggcggc atcctgcacc gaatgcaccc
     1261 actcgccgcc gggcgaacgc ttagtggcat cgaccgtgtt gccgaccatc atgtagacag
     1321 gcgaccggtc gcaccacgcg ttatagagag ccatcgatgc atgctgcagg ccgacggtgc
     1381 cgtgcgccaa taccaagagc ggcttgccct caatcttggc atagccattc gccatggcga
     1441 cggatgcttc ctcgtgcaag caggtgtgcc aatcgatttt cagatagttg atgagcgatt
     1501 cgtgcaagcc gcgaaagctg gtgccgggat tgcatgcgac gtgctcgatt ccgaggctct
     1561 tgatcacatc tgccatgtag tccgacccgc tggaaccctg aacgattggc tgttcgggcg
     1621 gatggccgct ctccatggcc gagttaggtg ggggtgtaat cgggcttgcg gtgcgagttt
     1681 gcgcgtaagc ctttgtctcg cgcattgagc caaccaccgc gacaccggct gccgtcgctc
     1741 ccttcagcag gccgcgtctg ctcagatccg aatcgcgtcc atgtcttgac atggctcctc
     1801 cggggctgcg gttcgctttt caattaacaa cagttcaaag atatcattag taccgaattg
     1861 ggtgtcaacc gtcccacgtc ctcggcgtgg gattccaaca gtggagacag agccccgatc
     1921 gcgacggtca cgaagaacta ccgtcgcgcc caatccaagc agccgatctg gtggcacgag
     1981 gacatctgcg ccgaagccaa ccttcatgtc gatattggcg ggcgggccta tttcttgagc
     2041 gcggatgggc tgctgatgcc ccaccaagaa agaccagtca ccgccggatc tgcgctattt
     2101 caggcagacc cggaagtaac gtgatcggtc gggccggtct ctttccgcgc gaatgaccga
     2161 gtgaaatagg ttgaatttca cccacaccgc gccagtgcct ctcaactgat cgcgtcgggc
     2221 tttatcgaga gccgattcgc gataggctca ccgatcatca ttccgctttg gccagtgttg
     2281 tagcatagat gggttgagct actcttttgc cttcaattcc cctccgtgcg ccgcaataaa
     2341 cgcccgaatg tcgtctgcca tttctaggag cttcagccat tgctccttat acaaggtgac
     2401 gggaaagcgc cccatcccat agaccgatag cgctcccttc tcgctcacct tcattcggat
     2461 gttggtggac gtcccttttt tgagcgcggc gttctccctg cgtagtcgct caagctcaac
     2521 cttcatgtct tcatcggcca tgtgtcctcc tccgatcagg ccgccactaa cgctaatagg
     2581 ggcgctgatg gcaagggcgt tagcatgata gcccgttgct tggccgcgcc ttcgcggtca
     2641 agccccaacg cccgtaaggg ttgcgcccct ggcgcaaggc gcgacggcct gcgatttgct
     2701 acgtagagga cgaagcccac ccgaagtcca cccccacgag acccaatagc caaattttca
     2761 tgcagcctca aaacgagtgc gtcatctcat tgcgccgctt gtcattgcgc cgcttgcacc
     2821 caatttgggc gcatgataat ctcgaggtat gcgaatcatc gctcggcgca ccttgcgaga
     2881 gttcttggag agacgccggg gatacaaaga ccatacagcg ttgaaggctg ccgtggacgc
     2941 gtgcttcgac gaagtcaaga aggcacgctg gtcaggcacg tctgatgtga agcggagcta
     3001 tgcaacggct agcatggttt cggccgaccg gatcgtgttc aacatcaaag ggaacgatta
     3061 tcggctggtc attgccgtcg acttcgagaa gagcatcgtg tggatcaaat ggattggcac
     3121 gcacaaggac tgcgacagga tcgatgtgag agaggtgcag catggcggat gaggtaaggc
     3181 cgatccggac gaagcgggac tatgaagcgg cgctcaagga ggtcgagcgc ctctggggcg
     3241 ccaaggcggg aacgcgcgat ggcgatcgac tggatgtgct cgcgaccctc gtcgatgcat
     3301 atgaggggga gcactatccg atggatccac ccgatcccat cgaggcgatc aaatttcgca
     3361 tggagcaaca ggggctcacc cggcgggatc tggaggcgat cattggcacc cgtacccgca
     3421 tcgccgaggt cctgaaccga aagcgtggac tgtcgatcgc gatgatccgc cggctgcatg
     3481 aacgcctcgg catctcggca gaggtgctga tccggccaag ccgaaaaagc gccgcgtgag
     3541 cgatgcccac cgacctatgc ctgtgagctt tcagcaaata cttgaggcct tcgagttcgt
     3601 cagcatgggc ggcggtcctg gtgaacatca ggccgttttg tgcaggcaga cgggcaagat
     3661 ttactggcac tccgaatttt ccgacctcga cgagttgaac gatgagctgc ccgacgacat
     3721 tgaggatgat aaaaaatacg tgacgatccc cgacaaacgt gagctcggac tcggcaagcc
     3781 gctagtgctc gactttgcgc gcgaattcct gccaaacgat ttcgatgagg ttcgatacat
     3841 atttggcaag agaggcgcct actcgggatt ccgagccttg ctggcgcgaa gaaacgccgt
     3901 tgatcgctgg gacaatttcg aatcgaaagc gaccgaacga gcgttgcggg aatggtgcga
     3961 actcaattcg atagctctag ccgactgata ggccgaccgg tgcgacgcat cccttatcaa
     4021 cgacgcgtgg cgagcatctg ggatgcggtt atgggcggct cggtgcggag cttgcgtgct
     4081 aatcggcaac aatgtcgcgc aaattcgtag agtggcgcgc tacggtcgta gacgatcacg
     4141 tcacatcctt tagtcgcttg acgagccggc gatgttcgcg acatccggcc aggcccggaa
     4201 gcgtcaacat cacgaccggc gcttgcgtac tatcggtatc ggccaagata aagcgttcga
     4261 catgaagacc aggatgggag ccactggacg cgcgaagcag cgcgtccagt ttgccgttca
     4321 gcagttcggc aagatcgtca gtgactttca gtgtcaccac ttcgtcgccc gtcgcagttt
     4381 gacgaatttt gcgcaccgtc gagccggcaa ttcgcatgat tttgggcgca acacccaaac
     4441 gcagctttcg ccctcgcaat gccggagcgg tcgattccgt cgccttggag atgatatcga
     4501 acgccgacac gatggctggc agatatgctt caccttcatc ggtcaggaca aggctgcgtg
     4561 gtagacgtcg aaacagcgtg atgccgagcg ctcgctcaag tgacttgacc tgctggctca
     4621 cggcacctgg cgtgacacga agttcgtcag cggctcgcgt aaagctgagg tggcgagccg
     4681 ccgcctcaaa tgaacgcaga ccattgaggg gtggcagccg gtgactcatc ttgctcacgg
     4741 gactttcttg cgcgatcgac gg
//
LOCUS       DATILV010000447         4341 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3685208, whole genome shotgun sequence.
ACCESSION   DATILV010000447 DATILV010000000
VERSION     DATILV010000447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4341)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4341)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4341
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3685208"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1102
                     /locus_tag="VLJ17_10165"
     CDS             <1..1102
                     /locus_tag="VLJ17_10165"
                     /EC_number="2.8.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024860.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA];
                     GO_function: GO:0050656 - 3'-phosphoadenosine
                     5'-phosphosulfate binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HSV23380.1"
                     /translation="DEARECFERAIAIAPLLAGSYYDLVRCRRVTSDGDGLLQRMQDA
                     LATPGLETAQLHRLHLAIGKAADDLGNYALAMQHFDAADAVRRSSAPFDAAAFSIEID
                     RLIARCTPEWIASARGLGSSDAMPVLIVGMPRSGTTLVEQIVSMHPEVGAGGELNFWN
                     ERGAEWHRSGPPGNEKLFLEEAAADYLDVLRAIAPKAGRVTDKMPFNFLWTGLIHVAF
                     PRAIIIHCRRAAVDTALSIHQTHFHPGFAFPTGGEDLVTYFHNYQRLTDHWKRVLPAD
                     RFIEVDYEELTGAPEPVIRRIIAACGLPWDDACLRPESNPRAVKTPSKWQTRQPIYRT
                     SVARWRRYEPWLGPLCALIADESERDVGIAQS"
     gene            1357..4206
                     /locus_tag="VLJ17_10170"
     CDS             1357..4206
                     /locus_tag="VLJ17_10170"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HSV23381.1"
                     /translation="MARRIKSNSRKKSRNKRLSPLASLLAAGLSFPAIAAAQSVPYPT
                     YVTGPQPNGSWVVGNGQVINPAGIQVDLGIRVRAKAIALNPNLNTHTAAVLTLGAGEA
                     VAVFDTNTGAVLQNYVALGHDSSGSYSGIAYSADGKHLLFSQDSSNVALANVNDQGLL
                     GDEAQVSVPPDSTFINCFPNSPVGPYARPCATFYTPSTSYPGGVAFSKDGNSAYALLN
                     QNNTLTRIDLTTKPPKQAEQIRVGNAPHSIVIGSNGTTAYVSNEGGRPATEADFQIYS
                     AGTEIVADPVVGAAITGTVSVVDLSSMKVTGTISTGLHPTGMAFYGRHLLVANTYSDT
                     ISVIDTATNEVERTIDLGLPIRVPGDRRPAYGAAPNSIAVDGKKGVAYVALYNANAIA
                     VVDLKDDDRHPVLGMIPVAYAPSSVVLDEANNTLLVANDKGIGTRYSFETDYGVTDYN
                     THQDNGTVSIVPVPDRGTLEAMTRQVFANNHWDLVQNIKSAAGGSPHAKLVAIPAKIG
                     DPSLIKHVFLIIRENRTYDQVLGDVSSGNGDPSLAVFGGKITPNAHKLVRRFPLLDNF
                     YDPSRQSADGHQWIAEGMAPYADDIQSPDWNRSYPGGNAGDALAYQKKGFLFSEAADA
                     GLSVKIYGEYVENQSFQQPNGSTSEPSWSDFYADAKKFEAGLEKTLYYQNTTHAESSV
                     PAVSNHLIKNFPQFDMGIPDQFRVDLWMQDFKKDLGAGTVPALSILWITDDHTGGPPT
                     PEAQQADNDLAIGRMIDYISHSSVWSSSAIFLEEDDAQNGVDHVDGHRSPGYIVSPYA
                     VQNGSTDHTYYTQVNMTRTIEQILGLPPMNQFDLVASPMRTAFVKGTPPAENFRPWRH
                     VPNQVPLDEGVTASAAPTTDSPAVQALRKAWLEKKAQIFAGKLTKPDAEDPDTVNHLN
                     WYLTTGFKRPYPGESKVRPASDFNNPAPTAADTDD"
BASE COUNT          923 a         1406 c         1246 g          766 t
ORIGIN      
        1 tgacgaggct cgagaatgct tcgaacgcgc gatcgcgatc gctccgctgc tggcgggaag
       61 ctactacgat ctggttcgct gtcgccgcgt tacaagcgac ggcgatggtc tgctgcaacg
      121 gatgcaagac gccctggcca ctccggggct ggaaacggcg caactccacc ggcttcatct
      181 tgcgattggc aaggcggcgg atgatcttgg caactacgcc ttggctatgc aacatttcga
      241 cgccgcagac gccgtgcgcc ggagctctgc gccgttcgac gcggccgcgt tctccattga
      301 gatcgatcgt ctgattgccc gctgcacgcc cgaatggatc gcgtcggcgc gcggattggg
      361 cagcagcgat gctatgccgg tgctgatcgt cggcatgccg cggtccggca caactctcgt
      421 cgagcagatc gtctccatgc atccagaggt cggggccggc ggcgaactca atttctggaa
      481 cgagcgcggg gcggagtggc accgctccgg cccacccggg aacgagaagt tattcctcga
      541 ggaggccgcc gcagattatc tcgatgtgct gcgcgcgatc gcgccgaagg cagggcgagt
      601 gacggacaaa atgccgttca attttctctg gaccgggctg attcacgtgg cgtttccgcg
      661 cgcgatcatc attcactgcc gacgcgctgc agtcgacacg gcgctatcga ttcatcaaac
      721 gcatttccat ccgggcttcg catttccgac cggtggtgaa gatctggtca catatttcca
      781 caattatcag aggctcaccg accattggaa gagagtgctg cctgcggatc gcttcatcga
      841 ggtcgactac gaggaactga ctggcgcgcc cgaaccagtg atccggcgga tcatcgcggc
      901 ctgtgggctg ccgtgggacg atgcctgcct ccgcccagaa tcgaatccgc gggcagtgaa
      961 gaccccgagc aaatggcaga cccggcagcc gatctatcgc acctccgtcg cacgctggcg
     1021 acgctacgaa ccttggctgg ggcccctgtg tgcgctcatc gcggatgaat cggaacgcga
     1081 tgtgggtatc gcccaatcgt gatccgttga agcagcccgc ctctcaagaa agatacgacg
     1141 acgtcacgaa acacacctct actacgtgaa gttgcgtgta tcgcagtacg aggaaaactc
     1201 cggcccatgt aacaccaatt tcacccgaaa ttcacgtggc cgtcacaaat tgttggtaat
     1261 gtcggcgact atcatcggcg gtaatagttc cgcccccgcc cttcgcaggg ccaaccccgg
     1321 gttgagtaat gaaaatttca atgaggagaa cggtaaatgg ctcgcagaat taagagcaat
     1381 tctcgaaaaa aatctcggaa caagcgtctg agtccgcttg ccagcctgtt ggcagcaggg
     1441 ctgagctttc cggcgattgc cgctgcacag tccgtgccgt acccgaccta cgtcaccggc
     1501 ccgcagccga acggctcgtg ggtcgtcggc aatggccagg tcatcaaccc agccggcatc
     1561 caggtagacc tcggcatccg cgtccgtgcg aaggccatcg cgctgaaccc gaatctcaac
     1621 actcacaccg ccgccgttct cacgttgggc gcaggggaag ccgtcgcagt gttcgacacc
     1681 aacaccggcg ccgtcctgca gaactacgtc gcactcggac acgattcgag cggcagctat
     1741 agcggcatag cctattcggc ggacggcaag cacctgttgt tcagccagga cagcagtaac
     1801 gtcgccttgg ccaacgtcaa tgaccagggc ttgctgggag acgaggcgca ggtcagcgtg
     1861 ccgccggaca gcaccttcat caactgtttt ccgaacagcc ctgtaggccc gtacgccaga
     1921 ccctgcgcca cgttctatac cccgagcact tcttatcccg gcggtgtcgc gttctcgaag
     1981 gatggcaaca gcgcttacgc actgctgaac cagaacaaca cgctcaccag gatcgacctg
     2041 accacgaagc cgccgaagca ggccgaacag atccgcgtcg gcaatgcgcc gcatagcatc
     2101 gtgatcggca gcaacggcac gaccgcctac gtcagcaacg aaggtggccg gcccgccacc
     2161 gaggccgact tccagatcta ctccgccggc accgaaatcg tcgccgaccc agtagttggc
     2221 gccgccatca ccggtaccgt ttctgtggtt gatctctcct ccatgaaggt caccggcacc
     2281 atctcgaccg gtctgcaccc gaccgggatg gcgttctacg gacggcacct attggtcgct
     2341 aatacctata gcgacaccat ctcggttatc gacacggcca ccaacgaggt ggaacggacg
     2401 atcgaccttg ggctgccgat cagagtgccc ggcgaccgcc ggccggccta tggtgccgcg
     2461 ccgaactcga tcgccgtcga tggcaagaag ggtgttgcct acgtcgcgct ttacaatgcc
     2521 aacgcgatcg cggtggtcga cctcaaagat gacgacaggc atcccgtcct gggcatgatc
     2581 ccggtagcct atgcgccgag ttcggttgtg ctggacgagg ccaataacac gctcctcgtt
     2641 gccaatgaca agggcatcgg cacgcgttat tcgttcgaga ctgattacgg cgtcaccgac
     2701 tacaacactc accaggacaa tggcactgtc agcatcgtcc ccgtgccgga tcgcgggacc
     2761 ttggaggcga tgaccaggca ggttttcgcg aacaaccact gggatctggt gcaaaatatc
     2821 aagtctgccg ccggtggctc cccgcatgcg aagctggtcg caatcccggc caagatcggc
     2881 gatccctcgc tgatcaagca cgtgttcctg atcatccgtg aaaaccgcac ctacgatcag
     2941 gtcttgggcg acgtctccag cggcaatggc gacccctcgt tggcggtatt cggcggcaag
     3001 atcacaccga acgctcacaa gctggtgagg cggttccctc tcctcgacaa tttctacgat
     3061 cccagtcgcc agtcggctga cggtcaccag tggatcgccg agggcatggc accctacgct
     3121 gacgatatcc agtcgcccga ctggaaccgg agctatccag gcgggaacgc cggcgatgcc
     3181 ctcgcctatc agaaaaaggg cttcctcttc tcggaagcgg cggacgccgg tctgtcggtg
     3241 aagatctacg gcgaatacgt cgagaaccag tccttccaac agccgaacgg atcgaccagc
     3301 gagccgagct ggagcgactt ctatgccgac gccaagaagt tcgaggctgg gcttgagaag
     3361 acgctgtact atcagaacac gacccacgca gagtcctctg tcccggccgt gtccaatcac
     3421 ctcatcaaga acttcccgca gttcgatatg ggcatccccg accagttccg cgtcgatctg
     3481 tggatgcagg acttcaagaa agacctcgga gccggtacgg tgcccgcgtt gagcatcctg
     3541 tggataacgg acgaccacac gggcggaccg ccgaccccgg aggctcaaca ggccgataac
     3601 gacctggcta ttggacgcat gatcgactac atcagccaca gcagcgtgtg gtcttcgtcg
     3661 gcaatcttcc tggaggaaga cgacgcgcag aacggcgtcg atcacgttga cggtcatcgc
     3721 agcccgggct atatcgtcag cccgtacgcc gtgcagaacg gatccaccga ccacacctac
     3781 tacacacagg tcaacatgac gcggactatc gagcaaatcc tcggtctgcc gcccatgaat
     3841 cagttcgacc tcgtggcgtc accaatgagg acagcgtttg tgaagggcac gccgcctgcg
     3901 gaaaacttca ggccgtggag gcacgtgcca aaccaggtcc cgctggacga gggcgttacc
     3961 gcgagcgcag cgcccacaac ggacagccct gcggtccagg ccctgaggaa agcttggctc
     4021 gagaagaagg cgcagatctt cgccggcaaa ctgaccaagc ccgacgccga agacccggac
     4081 accgtcaacc atctgaactg gtacttaacc accgggttta agcggcctta tcccggcgag
     4141 agcaaggttc gccccgcgag cgacttcaac aaccccgcac ccaccgccgc tgacacggac
     4201 gactaagaca cgttccgact gcaacgaccc tctccccacc ggggggaggg atttttttgt
     4261 tcacgcctca agacgaaatc cccaccaatc cgaacccacc caacacggca ctgaacgcga
     4321 ctgccccggg ttggtcccgc g
//
LOCUS       DATILV010000448         6031 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1898460, whole genome shotgun sequence.
ACCESSION   DATILV010000448 DATILV010000000
VERSION     DATILV010000448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6031
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1898460"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..612)
                     /locus_tag="VLJ17_10175"
     CDS             complement(139..612)
                     /locus_tag="VLJ17_10175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YHS domain-containing (seleno)protein"
                     /protein_id="HSV23382.1"
                     /translation="MDRARVWPGVAVLCAAWAGGMVLAATTERVVTNPRTGLAIDGFD
                     PVAYFIDGAATPGRLDFEFRYHDVIWRFCNPGNRAAFAGNPGDYEPRFGGYDPIAVGR
                     GAPTPGNPEIWLIWEQKLYLFFDTRTRDEFAADPRRMVMQAETRWPDILRHVLSQ"
     gene            782..1423
                     /locus_tag="VLJ17_10180"
     CDS             782..1423
                     /locus_tag="VLJ17_10180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EipA family protein"
                     /protein_id="HSV23383.1"
                     /translation="MRATPRTIALIILIGLASSIACPHVGFAQPAPGPYPQPAPGPYP
                     QPAPGPYPQQSFTPGELVNTGQRFFGTVSRGLATVIENAASQWGLPNGYVLGEEAGGA
                     FFGGLRYGEGMLYTKNAGDLKVYWQGPSIGWDFGGDGARTMMLVYSLPAVEAIYQRFA
                     GIDGSAYFIGGFGMTALTANNVVLVPIRSGVGLRLGANVGYLKFTPVSTWNPF"
     gene            1611..2522
                     /locus_tag="VLJ17_10185"
     CDS             1611..2522
                     /locus_tag="VLJ17_10185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23384.1"
                     /translation="MIESIMFFGGGFLVAGLLALVLISLVHRRAVRLTLRRLEDAIPV
                     SLAEIQADKDKLRAEFAMSARRLELTIEQLKVKATSQLGDLARKTEAIAKLKAQLAEK
                     TAVTDALDAQSRSLSVRIHESEQEHAARSATVETTEQALATKEVELARAAIDINKLTL
                     TGETQRVEIALLKTQIEQFKSRIQELERDADDAARRLFDERVAVSTVTKALEGQREAE
                     QTWRAEHAENNLLRERIAEIAAQVAHMSMHEPGSPIAAILKDAESIRPTSFERVANGG
                     DGAPSAGSLTDRLRKLQVAASRISTAP"
     gene            2582..3061
                     /locus_tag="VLJ17_10190"
     CDS             2582..3061
                     /locus_tag="VLJ17_10190"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018071055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSV23385.1"
                     /translation="MLIRPAVPSDDKALRQIITPIIKAGETYALPSDWTEVEALAYWR
                     SPAHAVFVADEGTVVGTYYIRPNQRGGGDHVANCAFMTAANAAGRGVASAMCTHALQY
                     AAAAGYAAMQFNFVVSTNARAIALWQKFGFEIVGRLPGAFRHPTQGLVDALVMYRKL"
     gene            3421..4557
                     /locus_tag="VLJ17_10195"
     CDS             3421..4557
                     /locus_tag="VLJ17_10195"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSV23386.1"
                     /translation="MRKTLWLTAAALALVAQSGPDGAAAQTRTTLDIYVVDVEGGNAT
                     LLVAPSGESLLIDTGNVAPAAAIRDAERIMAAAKDARLNQIDNLIITHWHGDHYGGMA
                     ELARRIPIRHFIDHGPNVQPNPEVDEFLTKVYPQLYASAKHTVAKPGDKIAVAGLDVQ
                     VVTSAGETIGTALPGAGGPNPYCASFKPGENNAEDPMSVGIYVTFGKFRTVHLGDLTK
                     NKEFELMCPNNRLGGIDVFLGLHHGVNTSNSEVMIHATHPRVAIINNGTRKGGQPDVM
                     KVLHSSPGLEDLWQIHFSQLSGQEYTVPGMFIANGVDETLAAMPIAPIASPAPGPNTP
                     PPPAHNGPAYWIKVTAQQDGTFTVANTRNGFAKTYSPNGRLGTN"
     gene            4714..5856
                     /locus_tag="VLJ17_10200"
     CDS             4714..5856
                     /locus_tag="VLJ17_10200"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSV23387.1"
                     /translation="MQMKSVLKAAICLAVLLVPAGHNQAAAQARTTLDIYVVDVEGGN
                     ATLFIAPSGESVLIDTGNFAPEAAVRDAERIAAAAKDARLIEIDHLITTHWHGDHFGG
                     MAEVAKRIPIRDYIDHGPNIQPVAAFDEFFAKIYPALYGAAKHTVAKPGDTIAVAGLD
                     WRIVTAAGAVLKAPLAGAGAVNASCANFKPQNADTTENAQSVGSVITFGKFRAVHLGD
                     LTWNKEFELMCPNNPIGAIDLFVVSHHGLGVSNSPVLVHGIRPRVAVVNNGTRKGAVP
                     DSMKTLFSSPGIEDVWQIHFSQLSGQEYTVPGMLIANDLDAPLTAMPIQPIAAPPTGP
                     DTPPPPAHNGPAYWIKVSAQPDGTFTVTNARNGFAKTYGTNGRGTN"
BASE COUNT         1240 a         1881 c         1810 g         1100 t
ORIGIN      
        1 tgagcagcgc cgtgactgta tcgtgaggaa caccgcagca tgcggcccga cgaagcagga
       61 accatccgga ggggctgttt gatgcagaac actggaaccc ccgctattca tggcggggag
      121 gatgtcagaa gctactcgtc attgcgacag cacatgcctg aggatgtccg gccaccgcgt
      181 ttcagcctgc ataaccatcc gtcgcgggtc ggccgcgaac tcgtcgcggg tccgagtatc
      241 aaagaatagg tagagctttt gctcccagat cagccatatc tccggattac ccggggttgg
      301 cgcgccgcga cccacagcga tcggatcgta gccgccgaaa cgcggttcgt agtcgccggg
      361 attgcccgcg aatgcggccc ggtttcccgg attgcagaaa cgccaaatca cgtcgtggta
      421 gcgaaactca aagtccaacc ggccgggtgt tgcggctcca tcgatgaaat aggcaaccgg
      481 atcgaagcca tctatggcga ggccggttcg cggatttgta accacccgtt cagtggtggc
      541 ggcgagcacc ataccgccag cccaagcggc gcaaagcact gccacaccgg gccacacgcg
      601 agccctgtcc acgaatgact tcccacaccg ccgtgctgag gtcatagttc tgctcaaagc
      661 tggaacgatt cggtatcctg ttttgttaaa cagggccggg gccatagcgc cattttggtg
      721 taaattccgt aaagacgccc tggcgggcca gcctccgccg gacaactaga aggagcttgc
      781 gatgcgcgcc acaccgcgaa caatcgcttt gatcattctg ataggtttgg cgtcatcgat
      841 tgcgtgcccg catgtcggat tcgcccaacc tgcgccaggt ccatacccgc agcctgcgcc
      901 gggtccatat ccgcaacctg cgccaggtcc atatccgcaa caaagcttta cgcctggcga
      961 actggtcaat acggggcagc ggtttttcgg taccgtgtcg cgaggactcg ccaccgtgat
     1021 cgaaaatgcc gccagccagt ggggcctgcc gaacggatat gtgctgggtg aagaggctgg
     1081 tggcgccttt ttcggcgggc tgcgctacgg cgaaggtatg ctttatacga aaaacgccgg
     1141 cgatctgaag gtatactggc aagggccatc aatcggatgg gatttcggcg gcgatggtgc
     1201 ccggaccatg atgttggttt acagccttcc ggcggtagag gcgatctacc agcgctttgc
     1261 cggtatcgac ggttctgcct attttatcgg cggctttggc atgacggccc tgaccgcgaa
     1321 caacgtcgtg ctggtgccga tccggtccgg agttggactc cggctcgggg cgaacgtcgg
     1381 ctatttgaaa ttcactccgg tttcgacatg gaatccgttt tagtgcgcgg tcgcccgcgc
     1441 tatatatcct tcgggatcaa ttcggggcgc cgtgaagcag cgagcccgca atccgcattc
     1501 ccgaacaggg gttatggatt cggagcttca gagtttcgct cgcgctccgg aatgatgcaa
     1561 ccaagtgtca gagtcagcac gctaggctgt gacaggcagg agttgagttc atgatcgaat
     1621 cgatcatgtt ttttggcggc ggatttctgg ttgcgggttt gttagcgctc gtactgatct
     1681 ccttagttca tcgtcgtgcg gtccgcctca ctctgcgccg gctggaggac gccattccgg
     1741 tgtcgctggc cgagattcaa gccgacaagg acaaactgcg cgctgagttc gcgatgtcgg
     1801 ctcgtaggtt ggaattgacg atcgagcagc tcaaggtaaa ggccaccagc caactcggcg
     1861 atcttgcgcg caagacggag gcaattgcca aactcaaagc ccagctcgcc gagaagaccg
     1921 cggttactga cgcgctcgat gcccaatcca ggagcctcag cgtcaggatt cacgagtccg
     1981 agcaggaaca tgcggcgcga tctgccactg tcgaaaccac agaacaggcg ctcgccacca
     2041 aagaagtcga acttgccaga gctgcaatcg atatcaacaa gctgacgctg acgggcgaaa
     2101 cccaaagagt cgagatcgca ttgctcaaaa cccagatcga acaattcaaa tcgagaatcc
     2161 aggaattgga acgcgatgcc gacgacgcgg cgcggcgtct attcgacgag cgcgtcgcgg
     2221 tctcgaccgt caccaaagca ttagaggggc agcgcgaggc tgagcagacg tggcgagccg
     2281 agcacgccga aaacaacctt ctgcgcgaac gtatcgctga aattgccgct caagtcgccc
     2341 acatgtcgat gcacgaaccc ggttcgccga tcgccgccat cctcaaggac gccgagagca
     2401 ttcgcccgac tagcttcgag cgcgtcgcca acggcggtga cggagccccg tccgctggca
     2461 gcctcactga ccgcctccgc aagctgcagg ttgccgcatc gcggatttcc accgccccat
     2521 aggatttcct cgcttgcggg ggaggaatgg cgcggtaact tcctcgaccc taaagaccgg
     2581 catgctcatt agacccgccg ttcccagcga tgacaaggca ctccgacaga tcatcacgcc
     2641 catcatcaag gccggtgaaa cctacgcgct gccttcggac tggactgagg tggaggcgct
     2701 cgcctattgg cggtcgccgg cccacgccgt attcgtcgca gatgagggca cagtggttgg
     2761 gacttactat atccgcccca atcagcgtgg cggcggcgac cacgtggcga actgcgcgtt
     2821 catgaccgcg gcgaacgcag ctggacgagg cgttgccagc gccatgtgta cccatgcgct
     2881 gcaatacgca gccgccgccg gttacgccgc gatgcaattc aactttgttg tcagcaccaa
     2941 cgcacgcgcc atcgcactgt ggcagaagtt tggattcgag atcgtgggtc gcttgccggg
     3001 cgccttccgg catccgacgc aggggcttgt cgatgcgctc gtcatgtaca ggaagctttg
     3061 accaagaatt ttagcgcagc aagctgcggg gtttcacgcc ggagatatgc gccgaggcgc
     3121 gttggcccga tatgagtctg attgcgggtt tctctgcagt tcgatgtatt ggcgaatgat
     3181 gctgatgggc gcaccgccac atgtcagttg gcggccacgc caatccctga tggcttgatg
     3241 agatccggct gccatgaatc gcctgacaag cggcgacgtt tggaactgcc cgggctaccg
     3301 gcgacccgcc gggattgcta ccatcggggt ataccggtgc tcgttcggga gccatcgggc
     3361 aacaacgccg gatccgccaa atgtgtcggg cgcgatcgga aagcacaggg gagggatttc
     3421 atgcgcaaga ctttatggct cacggccgcc gccttggcgc tggtcgctca atcggggccc
     3481 gatggcgctg cggcgcagac ccgcaccacc ttggacatct acgtggtcga cgtcgaaggc
     3541 ggcaacgcca cgctgctggt ggcgccgtcg ggcgaatcgc tgctgatcga taccggcaac
     3601 gtggcgccgg ccgccgcgat ccgggacgcc gagcgcatca tggcagccgc caaggacgcg
     3661 cgcctcaatc agatcgacaa cctcatcatc acccattggc acggcgacca ctatggcggc
     3721 atggcagagc tcgcgaggcg catcccgatc cgacatttca tcgaccatgg ccccaacgtt
     3781 cagccgaatc cggaggtcga cgagtttctc accaaggtct atccgcaact ttatgccagc
     3841 gcgaagcaca cggtcgcaaa gccgggcgat aagatcgcgg tcgcgggcct cgacgtgcag
     3901 gtggtgacct cggcgggcga gaccatcggg acggcgttgc caggcgcagg ggggccaaac
     3961 ccatattgcg cgagcttcaa gccgggcgaa aacaatgccg aggacccaat gtcggttggc
     4021 atttacgtca cgtttggaaa gttccgcacc gtgcatcttg gcgatctcac caagaacaag
     4081 gaattcgagc tgatgtgccc gaacaaccgc cttggcggca tcgacgtctt ccttggtctg
     4141 catcacggcg tgaacacctc gaactcggaa gtcatgatcc acgccaccca tccgcgggtc
     4201 gccatcatca acaacggcac ccgcaaaggc ggccagccag acgtcatgaa agtgctgcat
     4261 tcctcgcctg gcctggaaga cctgtggcag attcatttct cccaactcag cggacaggaa
     4321 tacacggtgc cgggaatgtt catcgccaac ggggtcgacg agacgctcgc cgccatgccg
     4381 atagccccga tcgcctcccc cgcgcccggc cccaataccc caccgccgcc cgcccacaat
     4441 ggaccggcct actggatcaa ggtaacggca caacaggatg ggacatttac cgtcgcgaac
     4501 acgcgcaacg gcttcgccaa gacttactcg ccgaacggca gattggggac gaactgaggc
     4561 cgaaactttg tcatggtcat gcgccgcgaa agcccggcat ccggtaaccg caggaatgat
     4621 ggcgcgccac ggagcgatcg gaggttgctg gacggtccac tttcgcggac gatgacaatt
     4681 atggattggt tttccgacaa caaggaggat ccaatgcaaa tgaaatcagt actcaaagcc
     4741 gccatttgct tggcggtact gctggttccg gcaggacata atcaagccgc ggcgcaggcc
     4801 agaacgacgc tcgacattta cgtggtggac gtcgaaggcg gcaacgccac gctgttcatt
     4861 gccccgtctg gcgaatccgt gctgatcgac actggaaatt ttgcgcccga agcggcggtc
     4921 cgcgatgccg agcgcattgc cgcggccgcg aaggacgccc gtctcatcga gatcgatcat
     4981 ctgatcacca cccattggca cggcgatcat ttcggcggca tggcggaggt cgccaagcgc
     5041 atcccgatcc gcgactacat cgatcatggc cccaacatcc agccggttgc ggccttcgat
     5101 gaattcttcg ccaagattta tccggctctt tacggcgccg caaagcatac ggtcgcaaaa
     5161 cccggtgata ccatcgcggt tgcagggctc gattggcgca tcgtaacagc cgccggagcc
     5221 gtgctgaagg ccccgctggc tggcgccggc gccgtcaatg catcctgcgc gaacttcaag
     5281 ccccagaatg ctgacaccac cgagaacgcg caatcggtcg gcagcgtcat cacgttcggc
     5341 aagttccgcg ccgtgcatct cggcgacctc acctggaaca aggaattcga gctgatgtgc
     5401 ccgaacaatc caatcggagc gatcgacctg ttcgtagtct cgcatcacgg gctcggcgtc
     5461 tccaattcgc ctgtcctggt tcatggcatc cgtccgcgcg tcgccgtcgt gaacaacggc
     5521 acccgcaagg gggcggtccc tgactcgatg aagacgttgt tttcctcacc cggtatcgag
     5581 gacgtctggc agatccattt ctcccaactt agcgggcagg aatatacagt gccggggatg
     5641 ttgatcgcga acgacctcga cgcgccgttg accgccatgc cgatccagcc aattgccgcc
     5701 ccgccgaccg ggcccgacac gccgccgccg ccggcccaca acgggccggc ctactggatc
     5761 aaggtttcgg cgcaaccgga cggcacgttc acggtcacca atgcgcgtaa cggcttcgcc
     5821 aaaacctatg ggacaaacgg acggggaacg aattagcgcc gcgtcaagcg ggcgaacccg
     5881 gaggcctccg gcatcgcccg gcctctccct tggccgcacg acggaactgc gcctccacgg
     5941 cgcattttcc cgcatgagcg tcgcggttga tgatctgcag gttcggcacg ccccagaagc
     6001 cgagcagcga gggccatggc gtgtcgcggt g
//
LOCUS       DATILV010000449        12159 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1642730, whole genome shotgun sequence.
ACCESSION   DATILV010000449 DATILV010000000
VERSION     DATILV010000449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 12159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12159
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1642730"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..127)
                     /locus_tag="VLJ17_10205"
     CDS             complement(<1..127)
                     /locus_tag="VLJ17_10205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013164972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2948 family protein"
                     /protein_id="HSV23388.1"
                     /translation="MELLKLIALDRDDLEVVSTHLQDATLSVGDVHWLPSEHRLVI"
     gene            complement(242..724)
                     /locus_tag="VLJ17_10210"
     CDS             complement(242..724)
                     /locus_tag="VLJ17_10210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HSV23389.1"
                     /translation="MTFFEDLRVGTRTEVGHHTFVADEIKAFAREFDPQPFHLDEVAA
                     ARSHFGALCASGWHTAAVCLRHIVEDRQHRQAELRRRGEPVAKTGPSPGLRDLRWPTP
                     VYAGDTIAFAQEIVELRPVANRPDVGLRIARNTGTNQHGELVYSVLSSTFIERRVKSE
                     "
     gene            complement(721..1188)
                     /locus_tag="VLJ17_10215"
     CDS             complement(721..1188)
                     /locus_tag="VLJ17_10215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HSV23390.1"
                     /translation="MRAFEDFKVGDIAEFGPLAVTAAEIKSFATRFDPQPMHLDEAAA
                     QNSIVGGLVASGLHIVCMHMRLFADGVLRNSTSMGSPGVEEVRYLAPVRPGDGLTLRV
                     EVLGARPSKSRPKMGLVRFRSHLVNSNDKPVMEMIATLMFERRAAPAENEVAP"
     gene            complement(1211..2308)
                     /gene="ychF"
                     /locus_tag="VLJ17_10220"
     CDS             complement(1211..2308)
                     /gene="ychF"
                     /locus_tag="VLJ17_10220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HSV23391.1"
                     /translation="MGFKCGIVGLPNVGKSTLFNALTATVAAQAAKYPFSTIEANIGE
                     VAVPDPRLEALAKLARSAKIVPTRLAFVDIAGLVSGASRGEGLGNQFLAVIREVDAIA
                     HVVRCFENPDISHVNDRIDPIADIDTIETELMLADLDSLERRIDGLDKKVKGGDAEAK
                     LALDLINRALTLLREGKPARFVEVKSDEDKAFRGLGLLTSKPVLYVCNVDEVSAATGN
                     EFSRKVEERAQQEGAGVVVIAAQIEAEIAVLPTAERAEYLAAIGLTEAGLDRLIRAGY
                     GLLRLLTYFTAGPKEAKAWTITRGTRAPQAAGVIHTDFERGFIRAETIAYDDYVALGG
                     ETGAREAGRLRLEGKEYVVADGDVMHFRFAT"
     gene            2608..4098
                     /locus_tag="VLJ17_10225"
     CDS             2608..4098
                     /locus_tag="VLJ17_10225"
                     /inference="COORDINATES: protein motif:HMM:NF023222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase N-terminal
                     domain-containing protein"
                     /protein_id="HSV23392.1"
                     /translation="MTQANNASPNRRMRSGEDYLRSLKDGRHVYADGELVRDVTTHPA
                     FHGAAQSLAHLFDVAAAPEYRELMTYPSPRTGAPVWRAWQIPNSHAALRAKRLAAEKW
                     AEATFGLMGRTPDHVAGFITGFAAKPSLFAAAGQQFADNILNIYENLRDNHHYVTYAL
                     VPPQIDRSKPAHQQKDPTLYAGVVKERDDGIVISGAQQLATAGVFADYLHLSCIHPLR
                     PGDEAYANGVVIPINTPGLKLYPRRTFANERMNAFDYPLTTRFDETDSLCVFDNVFVP
                     WERVYIYRNLQICWDQWRKTPAHLYGNHQAQCRYAVKLRFMLGLAKRMNEMTGNDTHQ
                     AVQIEMGELAAIVTIVEQMLLAHETTGRIDADGILWPSQTGLYAVMSLQSELNGRMLE
                     TIRELAGAAMITLPSSARDFDNPEIACDMEKYMQSAITPARERVALLRMVWDFLGTEF
                     GSRHAQYEKFYGGASFLVKQNVNRFYDYNRATALVDAALGLSPLPP"
     gene            4294..4425
                     /locus_tag="VLJ17_10230"
     CDS             4294..4425
                     /locus_tag="VLJ17_10230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23393.1"
                     /translation="MPRVSPSAQTVRGLLFETGVARSVGAAKRAEDLGRDLWQTHRG"
     gene            complement(4532..5956)
                     /locus_tag="VLJ17_10235"
     CDS             complement(4532..5956)
                     /locus_tag="VLJ17_10235"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSV23394.1"
                     /translation="MPYRDLREFIAQIDALKALRRVEGADPLHEIGAITEVAAGMAEC
                     PALLFDRIKGHPPGFRIISNAVTSPQRAALALGIDPMLRPLDALKAWMAKRQTLAPSK
                     PVEVANPPFVENSQRGSDVDLAKFPAPVWHKQDGGAYIGSGSLVIMRDPEGGWVNASI
                     YRVQVHGLNKVTIQFDHGGRHGAIIARKYWESRKPCPVAVVNGEDPALFVAGFEYLAA
                     GTSEYDFAGAIKGAPIEIHPGPITGLPIPAYAEIVLEGHLLPLSETSLPEGPFGEFTG
                     YFAADTRRCPVMEVAAIHHRHDPILLGSPPMKPPRFHFGLPLRAAGIWSNLEAAGVTD
                     IVGVWQHVSQLMTVVALRQRYDGHAKRAALIAAAHSYMGRLVVVVDDDVDPSDLADVM
                     WAVATRCEPSEQTDIIRNAWSSALDPRIAPEAKERGVSSHSKLIIEAVKPFAWMERFP
                     KLSALSHEDARAIEEKWGEVLRGA"
     gene            complement(6052..7587)
                     /locus_tag="VLJ17_10240"
     CDS             complement(6052..7587)
                     /locus_tag="VLJ17_10240"
                     /inference="COORDINATES: protein motif:HMM:NF018032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase reactivating factor
                     EutA"
                     /protein_id="HSV23395.1"
                     /translation="MKIETDEQGGRIFFSSIGRSLEGEDEICILSVGVDIGSSTSHLV
                     FSRIVLERLDSRYVVTERETFYQSDILLTPYASQDTIDPEELGAFFEKQYENAMVDPD
                     EIDAGALILTGVAVRRSNARRIGELFARQAGKLVAVSAGDNLETVMAAYGSGAVARSI
                     REGAAVMNVDVGGGTSKIAVCHGGAVVAITALDVGARLVCTDATGRITRLEEAGRRFG
                     DDLGLALEIGDDLTPQDAGRMAARMADCLFAAMRGDAPRIGETGLLRLNPLAFADRID
                     VVTFSGGVSEYVYGWESGNFGDLGARLAAEIRNRVDAAGLRLEPPAQGIRATVIGASQ
                     YTTQVSGSTIFVSPLDALPLRNLPVIAPDFALDSETIDSTAVASAIQKALRHLDLTES
                     ETPVAIFVPWLGSASFHRLDAFCRGVVAGLSDLLARGLPVVLAGDGDVGGLLGIHFRE
                     EMKLTNPVISIDGLELKQFDFIDIGEMLESSGAVAVVIKSLIFPSSAALGQEWKTKEA
                     ASA"
     gene            complement(7587..8804)
                     /locus_tag="VLJ17_10245"
     CDS             complement(7587..8804)
                     /locus_tag="VLJ17_10245"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSV23396.1"
                     /translation="MHDVPGSHWHEPTAGRRAGFGKFGRPMTPYDLFMESEGIPVFRD
                     IGVSRVQNLPLAPWKRLGGRGTYIQLHGTEGKWGCYVVEVPGAGALNAEKHLYEEVYF
                     VVEGRGTTEVWLDADSKRHVFEWQQGSLFSIPVNAWHRIVNASSSPALLLGGTTAPNL
                     MNLINNIGAIFDCPYQFRDRFSGADDFYKYKDDIEPDPVRGLAMRRTNFIPDIVNCDL
                     PLDNRRSPGFRRVEPFMTGNTFYLWIGQHENGRYSKAHAHTSAAVLICIKGKGYTYTW
                     PEHAGVTPWRDGKAHLVKRVDYEPVGLVSAAPGGARWNHQHFGASREPLRLTAWFGPH
                     NPGREPGPPGEVHTDYTAMDIPEGGTSIPYWMEDPFIATEYGEILAREGVVNRMEPQF
                     YDKDYKGALPKGV"
     gene            9178..9402
                     /locus_tag="VLJ17_10250"
     CDS             9178..9402
                     /locus_tag="VLJ17_10250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB family transcriptional regulator"
                     /protein_id="HSV23397.1"
                     /translation="MRIEIKKIGNSDGLILPRELMQRLDLKRGQFLHVVELPGGGFQA
                     IPYDPGFEETMKIADELMDEYKDTLAVLAK"
     gene            9442..9831
                     /locus_tag="VLJ17_10255"
     CDS             9442..9831
                     /locus_tag="VLJ17_10255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008961828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system death-on-curing
                     family toxin"
                     /protein_id="HSV23398.1"
                     /translation="MSKEPKWVTYDQVVAMHSRQLRRFGGAPGLRDDSMLRSAIEHPI
                     NKRQYEKADLATLAAAYAYGLAKNHAFVDGNKRAAFMTMMVFLRINSVRFAPDQAHAT
                     AIMLSLAAGEVSEGSLARWIRDNWPKS"
     gene            9930..11291
                     /locus_tag="VLJ17_10260"
     CDS             9930..11291
                     /locus_tag="VLJ17_10260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020184315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AarF/UbiB family protein"
                     /protein_id="HSV23399.1"
                     /translation="MPRHDAEANRFSARAARYARVGTNIGGVAAKIVATRIFGLDRDS
                     VRGAVELAAALGGLKGPIMKVAQLMATVPDLLPSEYAAELTKLQSDAPPMGWAFVKRR
                     MMAELGADWQRQFDGFEHKPAAAASLGQVHRARAHDGTALACKLQYPDMQSAVEADLQ
                     QLHWLFAFHRRMNPAIDTTEIAGEIGARIREELDYQREAKHVALYRAMLASTPEVRVP
                     RVWPAQSTRRLLTLDWLDGDKLLAHKSDDITARNRIAVAMFKAWWQPFSRFGVIHGDP
                     HLGNYTAFIEDGTPLGINLLDYGCIRIFPSKFVGGVVDLYHGLLRGDEALVVHAYETW
                     GFRGLSRELVDTLNIWARFIYGPLLDDRERTIADGVKPSEYGRREAFRVHRALKEKGP
                     VRVPREFVFMDRAAIGLGGVFLHLAAKLNFYRLFNEAIEKFSIDRVAARQHDMLEAAG
                     LEP"
     gene            11465..11758
                     /locus_tag="VLJ17_10265"
     CDS             11465..11758
                     /locus_tag="VLJ17_10265"
                     /inference="COORDINATES: protein motif:HMM:NF019452.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aa3-type cytochrome c oxidase subunit IV"
                     /protein_id="HSV23400.1"
                     /translation="MADHGEVQYATATGNDLPSHETGYDQFVQATFVVTAAVVSILFG
                     LAIGGVLGHWLPAAIILVAAVIAAGISGWTGSRTVSLGMVAISALTLLLNAFS"
     gene            11819..>12159
                     /locus_tag="VLJ17_10270"
     CDS             11819..>12159
                     /locus_tag="VLJ17_10270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit alpha"
                     /protein_id="HSV23401.1"
                     /translation="MRISVARESDLAEPRVAATPETVKKLTMLGAELAVEPGAGVKSG
                     ILDEDYVTAGATVDSDAVRGADIVLKVRRPSEVELSSYKSGAVLIAIMDPFGNDAALA
                     AMANAGITAFA"
BASE COUNT         2346 a         3754 c         3739 g         2320 t
ORIGIN      
        1 tgatcaccag gcggtgttcg gaggggagcc agtggacgtc acccacgctg agcgtcgcat
       61 cctgcaggtg ggtcgaaacc acctccagat cgtcccgatc gagggcgatg agtttgagga
      121 gttccatcca gtgcctccct cgaaaaatag cgttcttcgc ctagttaggg tcggattttc
      181 gtcttcgcaa ggcggcctga caatagaatt ttttcctatt atcggcggag gcgaagggcc
      241 cctattctga cttcacgcgc cgctcgatga aggtgctgct caggaccgaa tagacaagtt
      301 cgccgtgctg gttggtgccg gtgttgcgtg cgatgcgcag gccgacgtcg gggcgattgg
      361 cgacggggcg taattccacg atctcctggg cgaacgcaat ggtgtcgccc gcgtagacag
      421 gtgtcggcca tctgagatcg cgcaggcccg gcgacggacc ggtcttcgcc accggctcgc
      481 cgcgccgacg caattcggcc tgacggtgct ggcggtcttc cacgatgtga cgcaggcaca
      541 ccgccgccgt gtgccatccc gacgcacaca gtgcgccgaa atgggatcgc gctgccgcca
      601 cctcgtcgag atgaaacggt tgtggatcga attcgcgtgc gaacgccttg atctcgtcgg
      661 ccacaaaggt gtgatggccc acctcggtac gggtgccgac acggagatcc tcgaaaaacg
      721 tcacggcgcg acctcgtttt cggccggcgc tgcgcgccgc tcaaacatca aggtggcgat
      781 catttccatc accggcttgt cgttggagtt gaccaagtgg ctacggaatc tgaccagccc
      841 catcttgggg cggcttttgg agggccgcgc gccgagcacc tcaacccgta gagtgaggcc
      901 gtcccccggc cggaccgggg ccagatagcg cacttcctcg acccctgggc tacccatgga
      961 ggtgctgttg cgcagcacgc cgtcagcgaa caggcgcatg tgcatgcaca cgatatgcag
     1021 acccgatgcg acaagccctc ccacaatgct gttctgagct gctgcctcgt cgaggtgcat
     1081 cggttgcgga tcgaatcgcg tcgcgaagga cttgatttcc gcggcggtga ccgcaagcgg
     1141 cccgaactcc gcgatgtcgc cgaccttgaa atcctcgaag gcgcgcatat tgccaatcag
     1201 aaatttggcg ttaggtcgca aaccggaaat gcatgacgtc gccgtcggcg accacgtatt
     1261 ccttgccttc gagacgtaat cgaccggctt cgcgggcgcc cgtttcgccg ccgagcgcga
     1321 cgtagtcgtc atacgcaata gtctcagcgc ggatgaagcc gcgctcgaaa tcagtgtgga
     1381 tgacgccagc cgcctgaggc gccctggtgc cgcgggttat ggtccatgct ttcgcctcct
     1441 tgggccccgc ggtgaaatag gtcagaaggc gcagcaggcc gtagccggca cgtatcagcc
     1501 gatcgagccc cgcctccgtg agcccgatcg cagccagata ctcggcgcgc tcggcggtgg
     1561 ggagcactgc gatctccgct tcgatctgcg ccgcgatcac cacgacgcca gcgccttcct
     1621 gctgggcgcg ttcctcgacc ttgcgggaaa attcattgcc ggttgcggcc gaaacttcgt
     1681 ccacgttgca gacgtagagc accggcttcg acgtcagcag gccgaggccg cggaacgctt
     1741 tgtcctcatc cgacttgact tccacgaacc gcgctggctt gccttcgcgc agcagggtga
     1801 gcgcgcggtt gatgagatcg agggcaagct tcgcttcagc gtcgcccccc ttcactttct
     1861 tgtccagccc atcgatgcgc cgctccaggc tgtcgagatc ggcgagcatc agctcggtct
     1921 cgatggtatc gatgtcggcg atcggatcga tccgatcgtt cacgtgggag atgtcgggat
     1981 tctcgaagca gcgcaccaca tgcgcgatag cgtcgacctc gcggatcaca gcgaggaact
     2041 ggttgccgag tccctcgccg cgcgaagcgc cgctgacgag tccggcgatg tccacgaagg
     2101 cgagccgcgt cggtacgatc ttggccgacc tggcgagctt cgccagcgcc tcaagccgcg
     2161 gatccggcac cgccacttca ccgatattgg cctcgatggt gctgaacgga tacttcgccg
     2221 cctgcgccgc cacggtcgcc gtcaaggcat taaacagcgt cgatttgccg acattcggca
     2281 acccgacgat accgcatttg aaacccatgt tggttcactc aaatcagtta gtggcgtgga
     2341 tcaagccgga aggatcaaat cgtgtttccg caattccgtg tcaagtgcgc gccccgccat
     2401 tgcggagccg agagccaagg gtggcagcca tttcgcaacg tcgttgcgga ttgtgcacat
     2461 gattcgaatt tcaaaaaacg ttgacctcga atccgcaaaa ggcgctggaa cttaaatagc
     2521 ttaacctgta gctaaatttt gtagcgaccg gccgcctttc cttcggtcta gcgcagcgcc
     2581 cggtcgcgcc tcgatggagc aatcgcgatg acgcaggcga acaacgcttc ccctaaccgc
     2641 aggatgcgca gcggcgagga ctatctgcgc tcgctcaagg atggccgcca tgtctatgcg
     2701 gatggcgagc tcgtcaggga cgttaccacg catccggcct tccacggggc ggcgcaaagt
     2761 ctggcgcatc tcttcgatgt cgcggcggcg cccgaatacc gcgagctgat gacctatccg
     2821 tcacccagga caggcgcgcc agtatggcgc gcctggcaaa ttccgaacag ccacgccgcc
     2881 ctgcgcgcca aacggctcgc cgccgaaaaa tgggcggagg cgactttcgg gctgatgggc
     2941 cgcacgcccg atcatgtggc gggcttcatc accggctttg cggcgaagcc cagcctgttt
     3001 gcggccgccg gccagcaatt cgcggacaat atcctcaaca tctacgaaaa cctgcgcgat
     3061 aatcatcact acgtcaccta tgccctcgtg cctccccaga tcgatcgcag caagccggcc
     3121 caccaacaaa aggaccccac attgtatgcc ggtgtagtaa aagagcgcga cgacggcatt
     3181 gtgatctccg gcgctcagca actcgcgact gctggcgtct tcgcagacta cctacacctc
     3241 tcctgcatcc atccgctgcg cccgggcgac gaagcctatg ccaacggcgt ggtgatcccg
     3301 attaacacgc ccgggctcaa gctctatccg cgtcggactt tcgccaacga gcggatgaat
     3361 gcgtttgatt acccactgac gacgcggttc gatgagaccg acagtctctg tgtgtttgac
     3421 aatgtgttcg tgccgtggga gcgcgtctac atctaccgca acctgcagat ctgctgggac
     3481 caatggcgga aaacaccggc gcatctttac ggcaaccatc aggcccaatg ccgctatgct
     3541 gtgaagctgc gcttcatgct ggggctcgcc aagcgcatga acgagatgac cggcaacgac
     3601 acccaccaag ccgtgcaaat cgagatgggc gaacttgccg cgatcgtcac catcgtggag
     3661 cagatgctgc tcgctcacga gaccaccggc cgtatcgacg ccgatggcat actgtggcca
     3721 tcgcagaccg ggctctatgc cgtcatgtca ctgcagtccg agctcaatgg gcgcatgctc
     3781 gagacgatcc gcgaactcgc cggcgccgcc atgatcacgc tgccgtcctc agcacgcgac
     3841 ttcgacaacc ccgagatcgc ttgcgacatg gaaaaataca tgcaatcagc catcacgccc
     3901 gcccgggaga gggtggcgct attgcggatg gtgtgggatt tcctcggcac agagttcggc
     3961 agccgccatg cccagtacga gaaattttac ggcggcgctt cgttcctggt gaagcagaac
     4021 gtcaaccgct tttacgacta caatcgggcc accgctctag tcgacgcggc gctcgggttg
     4081 tcgccgctac ctccgtaggt gggtaatggg cccgcgacgt agccaattgc ctagctaatg
     4141 attggttggt ggtccctcaa aatgacggtg tcggcaaccg gagtcaggcg ttgcctgagc
     4201 caagcatcat cgaggaatga ccaaagcgat cgtcgtcggt ggatgcgtac ctcgggatga
     4261 cgcccaggtg ttatcaatcc agcgagatcg atcatgccgc gcgtatctcc tagtgcgcag
     4321 acggtgcgcg gccttctgtt cgagaccggt gttgctcggt cggtcggcgc cgccaagcgc
     4381 gctgaagacc ttgggcgaga cctttggcaa acgcatcggg gctaagaagg caaacgcggt
     4441 tgtccgcaag cttgccgtga tcccgcaccg catgtggacc accaacaagg cgttccaagg
     4501 gaacgctgag gcttcatctc catccgggtc tctacgcgcc tctcaacacc tcgccccact
     4561 tctcctcgat cgcacgcgcg tcctcatgtg acagcgccga cagcttcgga aaccgttcca
     4621 tccaggcgaa cggcttgacg gcctcgatga tgagcttcga atgggaggag acgccgcgtt
     4681 ccttggcttc aggcgcgata cgtggatcga gcgccgagct ccaggcattg cggataatat
     4741 cggtctgctc ggacggctcg cagcgcgtcg ccaccgccca cataacatca gcgaggtcgg
     4801 acgggtcgac gtcgtcgtcc accacaacca cgaggcggcc catgtagctg tgggccgcgg
     4861 cgatcaaggc ggcgcgcttg gcgtggccat cgtagcgctg ccgtagcgct accacggtca
     4921 tcaattgtga cacgtgttgc caaacgccga caatatcggt gacaccggca gcttcgagat
     4981 tgctccagat gccggcggcg cgcagtggca gtccgaaatg gaagcgcggc ggcttcatgg
     5041 gcggcgagcc gagcaggatc ggatcgtggc ggtggtggat agcggcgacc tccatgaccg
     5101 ggcagcggcg cgtatccgcc gcgaaatagc cggtgaactc gccgaatggg ccttccggca
     5161 gggaggtttc gcttagggga agcagatggc cttcgagaac aatttccgcg taagccggta
     5221 tcggcaaccc ggtgatcgga ccgggatgga tttcgatcgg cgcgcccttg atggcgccgg
     5281 cgaaatcgta ttcggaggtg ccggccgcca gatattcgaa gcccgcgaca aacagcgccg
     5341 ggtcctcgcc attgaccacc gcgaccggac agggcttgcg gctttcccaa tatttccgcg
     5401 cgatgatggc gccgtgccgg ccgccgtgat cgaactggat ggtgaccttg ttcagcccat
     5461 gcacctggac gcgataaatc gaagcgttca cccagccgcc ttcgggatcc cgcataatca
     5521 caaggctgcc ggacccgata taggctccgc catcctgctt gtgccatacc ggggcgggaa
     5581 atttggcaag gtcgacatcg ctaccgcgtt gggaattttc tacgaatggc ggatttgcga
     5641 cttcgacggg cttggacggc gccaaagtct ggcgcttcgc catccatgcc ttcagggcat
     5701 cgagcggccg cagcatcggg tcgatgccaa gcgcgagcgc cgcgcgctgc gggctcgtca
     5761 ccgcgttcga tatgatgcgg aaacctggcg gatggccttt gatgcgatcg aacaacagcg
     5821 ccggacactc cgccatgccg gccgcgacct ccgtgatagc gccgatctca tggagcgggt
     5881 ccgcgccctc gacgcgccgc agcgccttga gggcatcgat ctgggcaatg aattcgcgaa
     5941 ggtcccggta gggcactgct gagactctgc tccgattttg agtcaggcgg gtgatagaat
     6001 aacttgctga tatataacgt acttttcaac atcttttcgt gtatgtgtaa gttacgccga
     6061 cgccgcctcc ttcgtcttcc actcctggcc cagtgcggca ctggacggga agatcagcga
     6121 tttgatcacc accgcaactg cgccggaact ttccagcatc tcgccgatgt cgatgaaatc
     6181 gaactgcttg agttcgagtc catcaataga aatcaccgga ttggtaagct tcatctcctc
     6241 gcggaaatga attcccaaga gtcccccgac gtcgccgtcg ccggccagca ctaccggaag
     6301 cccgcgcgcc aaaagatcgc tcaagcctgc tacaacaccg cggcagaatg catcgagacg
     6361 gtggaagctg gccgagccaa gccaggggac aaaaatcgca accggagtct cggattccgt
     6421 cagatcgaga tgccgcagcg ccttttggat cgccgaggcc accgcagtgc tgtcgatcgt
     6481 ctcgctgtcg agtgcgaagt ccggcgcgat gaccggaagg ttgcgcaacg gcagcgcgtc
     6541 gaggggcgac acgaagatcg tgctaccgct cacctgtgta gtgtattgcg acgccccgat
     6601 cacggtggcg cggatgcctt gggccggcgg ctccagccgc agtcctgccg catcgacgcg
     6661 attgcgaatc tcagccgcga gccgagcgcc gaggtcgccg aaattcccgc tctcccagcc
     6721 atagacgtat tcggaaacgc cgcctgagaa cgttacgaca tcgatacggt ccgcaaaggc
     6781 gaggggattg aggcgcagca ggcccgtttc gccgatccgg ggagcgtcgc ccctcatggc
     6841 ggcgaacagg cagtcggcca tccgggccgc catccgcccc gcgtcttgcg gcgtcaggtc
     6901 gtcgccgatt tcgagcgcga gaccaagatc atcgccgaag cggcgtccgg cttcctccag
     6961 ccgggtgatg cgccccgtcg catcggtgca gacgaggcgg gcgcccacat cgagtgccgt
     7021 gatagcgact accgcgccac catggcacac cgcaatcttg gaggtgccac cgcccacatc
     7081 gacgttcata accgcggcgc cttcgcggat ggagcgcgca accgcgccgg agccgtaggc
     7141 cgccatcacg gtctcgaggt tgtcgccggc gctgacggcg accagcttgc cggcttggcg
     7201 ggcaaacaat tcaccgatgc ggcgtgcatt gctgcgcctc accgcgacgc cagtgaggat
     7261 cagggcaccg gcatcgattt cgtcggggtc caccatcgcg ttctcgtatt gcttctcgaa
     7321 gaaggcgccg agctcttcgg ggtcgatggt gtcttgcgag gcatacggcg tgagcaggat
     7381 gtcggactga tagaacgtct cgcgttccgt caccacgtag cggctgtcga gccgttccaa
     7441 cacgatacgg gagaacacta ggtgcgaggt ggacgaaccg atgtcaacgc cgacgctcaa
     7501 gatgcagatt tcatcttcgc cctcgaggct gcgcccgatt gaagaaaaga aaatccggcc
     7561 gccctgttca tcggtttcga tcttcatcaa acgcccttcg gcaacgcgcc tttgtaatcc
     7621 ttgtcgtaga actgcggctc catgcgattg acgacgcctt cgcgtgcaag aatctcgccg
     7681 tattccgtgg cgataaacgg gtcctccatc cagtacggga tggaggtgcc gccttccgga
     7741 atgtccatgg cggtgtaatc ggtgtggacc tcgccaggcg ggcccggttc gcggcccggg
     7801 ttgtgcggac caaaccacgc ggtgaggcgc agcggttcgc gcgacgcgcc gaagtgctga
     7861 tggttccaac gcgcgccgcc gggcgccgcc gaaacgaggc cgaccggctc gtagtcgacc
     7921 cgcttgacga gatgcgcctt accgtcccgc cacggcgtga cgccggcatg ctcaggccac
     7981 gtgtaagtgt agcccttgcc cttgatgcag atgagcacgg ccgccgaggt gtgagcgtgg
     8041 gccttggagt agcggccgtt ctcgtgctgg ccgatccaga ggtagaaagt attgcccgtc
     8101 atgaacggct cgacacggcg gaatccgggc gagcggcggt tgtcgagcgg caaatcgcaa
     8161 ttgacgatat ccggaatgaa gttggttcgc cgcatggcga ggccgcgcac cgggtccggc
     8221 tcgatgtcgt ccttgtactt gtagaaatcg tctgccccgc tgaagcgatc gcggaactgg
     8281 tacgggcagt cgaagatcgc cccgatgttg ttgatgaggt tcatcaggtt cggtgccgtg
     8341 gtgccgccga gcagcagtgc cgggctcgaa ctggcgttga cgatgcgatg ccatgcattc
     8401 acagggatag agaacagcga gccctgctgc cattcgaaca catggcgctt ggagtcggcg
     8461 tcgagccaga cctccgtcgt gccgcggccc tcgaccacga aatagacttc ttcgtagagg
     8521 tgcttttcgg cgttgagcgc gccggcgccc ggcacctcga ccacgtagca gccccatttg
     8581 ccctcagtgc cgtgaagctg gatgtacgtg ccacggccgc cgaggcgttt ccacggtgcc
     8641 agcggcaggt tctgcacgcg gctgaccccg atatcgcgga acaccgggat gccctcggat
     8701 tccatgaaca gatcgtaggg cgtcatcggc cggccaaact tgccgaaacc ggcgcgccgg
     8761 ccggccgtgg gctcgtgcca atgggaaccg gggacgtcat gcatggcagg atcctttgcg
     8821 gtcaaggccg tgcgtctcaa cttatagcat cggcaacaaa gctgccttgc cataatactt
     8881 aactccggcg ccaatggacg gcgcgaattt tcccggcacc aagcgatact ccgctctgcg
     8941 aaaccttcgc gaccggttta cggcggcagg gctttctcag gcgcagcgcg cgaacaccat
     9001 gatgcccgta aacagcggcg tggggtccat ccactcgagc gtgagtagcc atcgtagctc
     9061 acgacttcgc gatcagctta tcgccctggt ccgggaccgt tgaacatctg ttgaacttgt
     9121 gcttgccgat gtgttataca gatgtacaat tccgactggc gctgttggag aaaggcgatg
     9181 cgtatcgaga tcaagaaaat cggcaactcc gatggcctca tcctgccccg cgaactcatg
     9241 cagcgtctcg atctgaagcg cggccagttc cttcatgtgg tcgaacttcc tggcggcgga
     9301 tttcaggcga tcccctacga tccgggtttc gaggagacga tgaaaatcgc cgacgaatta
     9361 atggacgaat acaaagatac gctcgcggtt ctggcgaaat gaccaaggct gaaatgacca
     9421 aggctgaaat gaccaagcct catgagcaag gaaccgaagt gggtaacgta cgaccaagtc
     9481 gtggcgatgc acagtaggca actgagacga tttggcggtg cgccgggtct gcgcgatgac
     9541 agcatgttac gctcagccat cgagcacccc atcaacaaaa ggcaatatga gaaggcggat
     9601 ttggccactc ttgcggccgc ctatgcatac gggctagcaa aaaaccacgc ctttgtggac
     9661 ggcaacaagc gtgccgcctt tatgaccatg atggtctttc ttcgtatcaa tagcgtgcgc
     9721 tttgcgccgg accaggctca cgccactgcc atcatgcttt cccttgcggc cggcgaagtg
     9781 agcgaaggga gtctcgcccg ctggatccgc gataactggc ccaaatcgta atgccagact
     9841 tcgcaacgcg gcccttcaat tcaacggatt gaaccaatag atcgttgttg tgaaagccga
     9901 cgccgcgtcg gctcgaagag gtgccgattt tgccgcgcca tgatgccgaa gcgaaccgat
     9961 tttccgcccg cgcggctcgc tatgcgcggg taggcaccaa tataggcggc gttgccgcta
    10021 agatcgttgc aacccggata tttgggctcg atcgcgacag cgtgcgcggc gcagtggagc
    10081 ttgcggcggc gctgggcggg ctcaaggggc cgatcatgaa ggtcgcccaa ttgatggcga
    10141 ccgtgccgga cctgctgccg tccgaatacg cggctgagct caccaagttg cagagcgatg
    10201 ccccgcccat gggctgggca ttcgtcaagc ggcgaatgat ggctgagctg ggcgccgact
    10261 ggcagcggca gttcgacggc ttcgagcaca agcccgctgc tgcggcgtca ctcgggcagg
    10321 tccaccgagc acgcgcccat gacggtacgg cgctggcctg caagctgcaa tatcccgaca
    10381 tgcagtcggc ggttgaagcc gatttgcaac agctccactg gctgtttgcg tttcatcgcc
    10441 gtatgaaccc cgccatcgat actaccgaaa tcgccggcga gatcggcgcg cggatccgag
    10501 aggaactcga ctatcaacgc gaggccaagc atgtcgcgct gtatcgtgcc atgttggcgt
    10561 cgacccccga agtgcgggtg ccacgggtgt ggcccgcgca atcgacgcgg cgcctcctca
    10621 cactcgactg gctcgatggc gacaagttgc tggctcacaa aagcgacgat atcacggcgc
    10681 gcaaccgcat tgcagtggcg atgttcaagg cgtggtggca gcccttcagc cgcttcgggg
    10741 tgatccatgg cgacccgcat ctcggcaatt acacggcttt tatcgaggac ggtacgccac
    10801 tgggaatcaa tctgctcgac tacggctgca ttcgcatctt tccttcaaaa ttcgtcggtg
    10861 gcgtggtcga tctctaccac ggattgctca ggggcgatga ggctctagtg gtgcatgcct
    10921 acgagacttg ggggttccga ggcctttctc gcgagttggt cgacactctc aacatctggg
    10981 cgcggttcat ctacgggccg ctgcttgacg accgcgagcg caccatagcg gacggcgtga
    11041 agccatccga atacggccgg cgtgaggctt tccgggttca tcgcgccctc aaggaaaaag
    11101 ggccggtgcg ggtgccccgc gaattcgtgt tcatggatcg ggctgcgatt ggtctcggcg
    11161 gggtattttt gcaccttgcc gcaaagctca atttttatcg actctttaac gaagcgatcg
    11221 aaaaattctc gattgaccgc gtcgcagcgc gccagcatga catgctcgaa gccgcgggac
    11281 tggagccata ggcgctatgc gttactctgg ggagcgggct cgtgtcggcg aggcagggat
    11341 gttgtgacgg atgtccgcca actgtagggc aggcatgcaa tttgcttcct tcacgttgcc
    11401 cttatgatgc atttaggcta agcgacaggc attctttcaa aacccgcaag agctcggagg
    11461 ggttatggcc gatcacggcg aagttcaata cgcaacggcg acaggcaacg acctcccgtc
    11521 gcatgagacc ggttacgacc agtttgtgca agcgaccttt gtggtaaccg cggcggtcgt
    11581 cagtatccta ttcggactgg cgatcggcgg cgtattaggc cattggttac cggctgccat
    11641 tatcctggtt gccgcggtta tcgcggccgg tatcagcgga tggaccggat cgcgaaccgt
    11701 cagcctgggc atggtggcga tttccgccct caccctgctg ctcaacgcct tttcctgacc
    11761 ggaccgtcat cctgaccaga ccgtcgacgg agcgttgtgc gtcagtggag ttgtgtgaat
    11821 gcgcatcagt gtcgcgcgtg agagtgatct ggccgagccg cgagttgccg ccacccccga
    11881 gacggtcaag aagcttacaa tgttgggtgc cgaattggcg gtcgagccag gcgccggcgt
    11941 caaatccggc atcctggatg aggattacgt aaccgccggc gctacagttg actctgacgc
    12001 cgtcaggggc gccgatatcg tgctcaaggt gcgacgcccg agcgaagttg agttatcgag
    12061 ctacaagtcc ggcgcggtgc tcatcgccat catggatccg ttcggtaatg acgccgccct
    12121 cgccgccatg gcgaacgctg gcatcacggc atttgccat
//
LOCUS       DATILV010000450         3668 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_106176, whole genome shotgun sequence.
ACCESSION   DATILV010000450 DATILV010000000
VERSION     DATILV010000450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3668)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3668)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3668
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106176"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..641)
                     /locus_tag="VLJ17_10275"
     CDS             complement(<1..641)
                     /locus_tag="VLJ17_10275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="coproporphyrinogen-III oxidase family protein"
                     /protein_id="HSV23402.1"
                     /translation="MAAANRHVGRPHANDPAFGVYVHWPFCRSKCPYCDFNSHVRHGG
                     VEEERFLRAYTTDITSTAERTPGRIVSTIFFGGGTPSLMEPATVAAILDAVAKNWRIA
                     NDVEVTLEANPTSVEAERFAGYRAAGVNRVSLGVQALDDAALSTLGRTHTAREAIDAV
                     TIARRIFARYSFDLIYARPGQTLEGWRAELTNAISEAAEHLSLYQLTIEPETP"
     gene            complement(628..1278)
                     /gene="rdgB"
                     /locus_tag="VLJ17_10280"
     CDS             complement(628..1278)
                     /gene="rdgB"
                     /locus_tag="VLJ17_10280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HSV23403.1"
                     /translation="MTVGHQHREITGRLVIATHNSGKMREMRELLEPFDVAPVAAGEL
                     GIGEPEETGASFRENARIKAEAAAKAARLPAFADDSGIAVDALGGAPGIHSARWAGPN
                     RDFATAMGEINRQLCDRGAVTPQLRGAHFIAALCVAWPDGHVEEFEGRVDGTLVWPPR
                     GDKGFGYDPMFLPNGYDLTFGEMTSAEKHGLPPRGLGLSHRARAFLKLAEACLGGS"
     gene            complement(1281..1994)
                     /gene="rph"
                     /locus_tag="VLJ17_10285"
     CDS             complement(1281..1994)
                     /gene="rph"
                     /locus_tag="VLJ17_10285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011923431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004549 - tRNA-specific ribonuclease
                     activity [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HSV23404.1"
                     /translation="MRPSRRQADELRAVSLERGVVKYAEGSCFVKFGDTHVLVTATLE
                     DRLPPWLKGQARGWITAEYGMLPRATLERTRREAAAGKQSGRTVEIQRLIGRSLRTVV
                     DLEALGERQITIDCDVIQADGGTRTAAITGAWVALHDCLAWMKSRDIIRTSPLREHVA
                     AISCGICSGTAVLDLDYAEDSGADTDANFVLTGGGGIVEIQTTAEKIPFTETQLLALL
                     ALARKGIGKLIDLQKIAVM"
     gene            2160..3248
                     /gene="hrcA"
                     /locus_tag="VLJ17_10290"
     CDS             2160..3248
                     /gene="hrcA"
                     /locus_tag="VLJ17_10290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009796533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heat-inducible transcriptional repressor HrcA"
                     /protein_id="HSV23405.1"
                     /translation="MRSVSQDVPIGSSEVSVAQLNERSREIFRQIVESYLTTGEPVGS
                     RNLSRIIPMTLSPASVRNVMQDLEQLGLIYAPHASAGRLPTELGLRFFVDALMQIGDL
                     SDKDRIAIEGQVAAAGTTVENVLTEASGLLSGLARAAGVVLTAKANVRMKHIEFVRLE
                     PERALVILVAEDGQVENRILSLPVGLPTSTLTEATNFLNTYIRGKTLAEAKSELEKAL
                     EAGRAELDQLTQAIVAAGLASWSGGERDERKLIVRGHANLLDDLKAVEDLERVRLLFD
                     ELETKRGVADLLGRAERAEGVRIFIGSENKLFSLSGSSTIIAPYRDSTGGIVGVIGVI
                     GPTRLNYARIIPMVDYTAKIVSKLLAPS"
     gene            3320..>3668
                     /gene="grpE"
                     /locus_tag="VLJ17_10295"
     CDS             3320..>3668
                     /gene="grpE"
                     /locus_tag="VLJ17_10295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HSV23406.1"
                     /translation="MTDATAAPNSNDAAVNADNGPAPVDALAKEVADYKDKLLRTLAD
                     MENLRRRTDREVADVRIYGISSLARDLVGVADNMRRALEAAGEPGAVIVGPAKALYEG
                     VELIEREFLKVLEK"
BASE COUNT          713 a         1088 c         1117 g          750 t
ORIGIN      
        1 aacggcgttt ccggttcgat ggtgagctgg tagagcgaca ggtgttcggc cgcctccgaa
       61 atggcattcg taagctcggc acgccacccc tccagggtct ggccgggtcg tgcataaatc
      121 aggtcgaatg aatagcgtgc gaaaatacgc cgtgcgatcg tgactgcatc gatggcttct
      181 cgcgccgtat gggtgcgccc caatgtggag agcgccgcat catcgagtgc ctggaccccg
      241 agcgatacgc gattgactcc ggccgcccgg tagccggcga aacgttcggc ttctacgctg
      301 gttggattgg cctccagtgt cacttcgacg tcgttcgcaa tgcgccaatt tttcgccacc
      361 gcatccagga ttgcggcaac tgtcgccggc tccatcaggg atggcgttcc gccgccgaag
      421 aagatcgtcg atacgatgcg gccgggcgtg cgctcggccg ttgaggtaat atcggtcgtg
      481 taagcgcgca ggaaacgctc ctcctcgacg ccgccatggc gtacatgact gttaaaatca
      541 caataggggc actttgaccg acagaacggc cagtgaacgt agacaccgaa cgccggatca
      601 ttggcgtggg ggcgtccgac atggcgatta gctgccgcca aggcaggcct ccgcaagctt
      661 gagaaacgct cgcgcccgat gtgatagccc gagccctctt gggggcaggc catgtttttc
      721 ggcgctcgtc atctccccaa aggtgagatc gtagccattt ggaagaaaca taggatcgta
      781 accaaagcct ttgtcgccgc gaggcggcca gactaacgta ccatcgacac ggccttcgaa
      841 ctcctccaca tggccatccg gccaagcgac gcatagcgcc gctatgaagt gagcgccgcg
      901 gagctgaggt gttacggcac cgcgatcaca cagctgacgg ttgatttccc ccatggccgt
      961 cgcaaaatcc ctgttcggac ctgcccagcg ggccgagtga atgcctggcg cacccccgag
     1021 ggcatcaacc gcgatcccgg agtcgtccgc aaaggccggc aagcgcgctg ccttcgcggc
     1081 ggcttcggcc ttaatgcgtg cattttcccg aaaactcgcg ccagtctcct cgggctcgcc
     1141 gatacccaac tccccggccg ctaccggcgc gacgtcaaac ggttcaagca attcgcgcat
     1201 ctcccgcatc ttgccggaat tgtgcgtcgc aatcaccaga cgtccggtga tttcgcgatg
     1261 ttgatgtcct accgtcaagg ctacatcacc gcgattttct gcagatcgat gagtttgccg
     1321 atacctttcc gagcgagtgc cagcagcgcc aacagttggg tttctgtaaa tggtattttc
     1381 tctgccgtgg tctgaatctc cacaatgcca ccaccaccgg tgaggacgaa attggcgtca
     1441 gtgtcggcgc cggagtcctc tgcatagtcc agatcgagca ctgccgtacc cgaacagatc
     1501 ccgcacgata ttgcggcgac gtgctcgcgc agcggcgagg tgcgaatgat atctctgctc
     1561 ttcatccagg cgaggcagtc atgcagagcg acccaggctc ccgttatggc tgccgttcgg
     1621 gtgccgccgt cggcctggat gacgtcgcaa tcgatggtga tctgccgctc gccgagtgct
     1681 tcaaggtcca cgacggtacg caagctgcgg ccaataagcc gctgaatttc gacggtgcgg
     1741 ccgctttgtt tgccagccgc cgcttcgcgt cgcgtccgct ctaaggtggc gcgcggcagc
     1801 atgccgtatt cggcagtgat ccagccgcgg gcttggcctt tgagccacgg cggcaggcga
     1861 tcttcaagcg ttgccgtcac cagcacatgg gtatcgccga acttcacaaa acacgagcct
     1921 tccgcgtatt tcacgacgcc gcgttcgagc gagacggcgc gcagttcatc ggcttggcgg
     1981 cggcttggtc gcattagctt cccccgggcg gcattgagct tgatgaatca tgcgccgcca
     2041 catggctttt aggttcacga gcgggctagg acaaggcccg tgacgggcgg aatgccgcta
     2101 cggccttgaa catgcggccg gggatggaca aataaacggc cccaggcaat catttggtaa
     2161 tgcggtccgt gtcccaagac gtccccatcg gatcgagcga agtcagcgtc gcccaactta
     2221 atgagcgttc gcgcgagatc tttcgccaga tcgtcgagag ctatctgacg accggggagc
     2281 cggtcggctc gcgcaacttg tcgcgtataa ttccgatgac gttgtcgccc gcatctgtgc
     2341 gcaacgtcat gcaagatctt gagcaattgg ggctcattta tgcgccccac gcctcggccg
     2401 gaaggctgcc cacggaactt ggcctgcgat ttttcgtcga tgccttgatg cagattggtg
     2461 atttgagcga caaggaccgt attgcaatcg agggtcaggt cgcggcggcg ggaacaacgg
     2521 ttgaaaacgt cctgacggag gcttccggct tgctttctgg ccttgcccgc gctgccggtg
     2581 ttgtgctcac cgctaaggcc aatgtgagga tgaagcacat cgaattcgtc cggctcgaac
     2641 cggaacgcgc cctcgttatc ctggtggctg aggacggcca agtcgagaat cgaatcctca
     2701 gcctgccggt ggggctgccg acgtcaacac ttaccgaggc caccaatttc cttaatactt
     2761 atattcgtgg caagacgctt gcagaagcca agtccgaact tgagaaggcc cttgaagccg
     2821 gccgcgctga acttgatcaa ctgacgcagg cgatcgtcgc ggcaggtctc gcgagctggt
     2881 cgggcggcga gcgtgacgag cgcaaattga tcgtgcgcgg tcatgccaat ctgcttgatg
     2941 acctcaaggc ggttgaagac ctcgaacggg tacgattgtt attcgatgag cttgaaacca
     3001 agcggggcgt tgccgatctc ctcggccgtg ccgaacgggc cgaaggcgtc aggattttta
     3061 tcggctcgga aaacaagctg ttttcgttgt cgggatcatc gaccattatc gcgccctatc
     3121 gggattcgac cggagggatc gtgggcgtga ttggggtcat cgggccgacc cggctcaact
     3181 acgctcgcat catccccatg gtcgactata cggccaagat tgtcagtaag ctgctggcgc
     3241 cctcgtaacg gcttgatttt tggcactaga gcatcgatat gcggggcact cctctgacaa
     3301 tttttcaggg aacgggatta tgacagatgc gaccgccgcc cctaacagca acgatgccgc
     3361 ggttaatgcg gacaatgggc cggcgcctgt ggatgcgctg gccaaggagg tggccgacta
     3421 taaagataag ttgctgcgca ctcttgcgga catggaaaac ttgcgccgcc gcaccgaccg
     3481 ggaggtggcg gatgttcgta tctatggcat ctcgagcctg gctcgggatt tggtcggggt
     3541 ggccgacaac atgcgccgcg ctttggaagc ggctggcgag cccggcgccg ttatcgtcgg
     3601 ccccgccaag gccttgtatg aaggggtcga actgattgag cgcgaatttc tcaaggttct
     3661 ggaaaaac
//
LOCUS       DATILV010000451         2479 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1388069, whole genome shotgun sequence.
ACCESSION   DATILV010000451 DATILV010000000
VERSION     DATILV010000451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2479)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2479)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2479
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1388069"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..982
                     /locus_tag="VLJ17_10300"
     CDS             <1..982
                     /locus_tag="VLJ17_10300"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="fatty acid--CoA ligase family protein"
                     /protein_id="HSV23407.1"
                     /translation="NGFDIGERQHLRASDRLWLAVPLFWSFGSANAVPAIMTHGGCVV
                     LQESFDAGEALALIEHERCSVYYGMANMARALLEHEDHPGRRLGAMRTGLTIGPPEDI
                     ARTIEALGAAELCNVYGSTETYGNCAVTDAHDPLALRLHSQGLPLPGMTIRVVDPVTR
                     RPLPEGEIGELAIGGYVTPGYYRAPELDAEAFDGDGCFLTGDLGTIEADGRIRFRGRL
                     KEMIKTGGVNVAPLEVEQVLLQHPDIVQAYVVGVPDRSKGEIVAAAVELRAGAATHPA
                     AIVAFCRERLASYKIPARLAFRTAAQLPRTPTGKIHKPSLGEQLAANNAT"
     gene            complement(1328..>2479)
                     /locus_tag="VLJ17_10305"
     CDS             complement(1328..>2479)
                     /locus_tag="VLJ17_10305"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSV23408.1"
                     /translation="HTGLWPDEGVDFSELRVGVIGTGSSGVQSIPIIAKQAKHLYVFQ
                     RTANFSLPARNAPMNPEKESAHKAQYPERRRAAFDTPFGIAGYPAPVKSALDLTEAER
                     RHAYEAKWAEGGSISFLYSFTDLLINKESNETASEYVRRKIRATVKDPKTAELLCPND
                     HPIGTKRLILDTDYYETYNRDNVTLVDIRSKPIKEITPAGLHTADADYALDAIVFATG
                     FDAMTGAMKEIDIRTDRGMSVREKWEHGPHTYLGIMIAGFPNLFMITGPQSPGVKSQM
                     ILACEQHVDWIADCMQYLSDYGFSRIEAEEDAEDAWVQHNNEVADRTLYPLANSWYVG
                     ANIPGKPRVFMPYVGGVAAYKKKCDEIAARGYEGFRLGVCVEEQRFAAD"
BASE COUNT          461 a          763 c          750 g          505 t
ORIGIN      
        1 caacggcttc gacatcggcg aacggcagca ccttcgcgcc agcgaccggt tatggctcgc
       61 cgtgccgctg ttctggtcat tcggctcggc caatgccgtg ccggcgatca tgactcacgg
      121 cggctgcgtc gtgctgcaag aaagcttcga cgcgggagaa gccctggcgc tgatcgagca
      181 cgagcgctgc agcgtctact acggcatggc caatatggcg cgggccctgc tggagcatga
      241 ggatcaccct gggcgccgcc tcggtgcgat gcggaccggg ctcaccatcg gcccgcccga
      301 ggacatcgcc aggaccatcg aggcgctggg ggccgcagaa ctctgcaatg tctacggctc
      361 gacggagacc tatggcaatt gcgccgtgac cgatgctcat gacccattgg cgctccgctt
      421 gcacagccaa ggcctgccgc ttcccggaat gacgatccgc gtcgtcgatc ccgttacccg
      481 gcggcccttg cccgaaggcg aaatcggcga gctcgccatc ggcggctacg tcacgccagg
      541 ctattatcgg gcgccggaac tcgatgcaga ggcgttcgac ggggatggct gttttctgac
      601 cggcgatctc ggcacgatcg aggcggacgg acgaatccgg tttcgcgggc ggctaaagga
      661 gatgatcaag accggcggcg tcaacgtcgc accgctcgag gtcgagcaag tcctgttaca
      721 gcatccggac attgtgcagg cctatgtcgt gggcgttccg gatcggtcga agggcgagat
      781 cgtcgccgca gcggtagagc tgcgggccgg ggcggcaacc catcccgcgg cgatcgtcgc
      841 cttctgccgc gagcgactgg caagctacaa gataccggcg cgacttgctt ttcgcacggc
      901 agcacagctc ccgcgcacgc cgacgggcaa gatccataag cccagcctcg gagagcaact
      961 ggcggcaaac aacgccacgt gacgtgggtg cggcgatggc gaccgacgtg gttcgcctgc
     1021 tgggtgcgat attccggtcc agatcagcgg ctccatggac gtatttcaac gggcgacctt
     1081 gggctgtggc agtactgaag cacgcgtgta ccgagccgcc cacgacccaa cgcagtcctc
     1141 cgctgacctt gttctgaatg gctcagagtg gctgctacgc gtcggctgac gtctttgcgc
     1201 cgaaaccgcc atctgcgtgt caccggctgg agctgcggag cctcagcaga cgaccggtcg
     1261 tgctggattt gcgcgggtgg ccagtgccct tggtcaaacg gccgcgagca gaacgtcatt
     1321 ggtacgatca atccgccgca aaccgctgct cttcaacgca aacacccaaa cgaaagcctt
     1381 cgtagcccct ggccgcgatc tcatcacatt tcttcttgta cgcggcgacg ccaccaacat
     1441 acggcatgaa cacacggggt ttccccggga tattggcgcc gacgtaccat gagttcgcca
     1501 acggatagag tgtacgatct gccacctcgt tgttgtgctg cacccaagcg tcctcggcgt
     1561 cctcctccgc ctcgatacgc gagaagccat aatcgctcag gtactgcatg caatccgcga
     1621 tccagtcgac gtgctgctcg caagccaata tcatctgact tttgacccca gggctctgcg
     1681 ggccggtaat cataaataga tttgggaacc cggcgatcat gatcccgagg taggtatgcg
     1741 gaccgtgttc ccacttctct cgaacggaca ttcctctatc tgtgcgaatg tcgatctctt
     1801 tcatcgcccc cgtcatggca tcaaagccgg ttgcaaaaac gattgcatcg agcgcgtagt
     1861 cggcatcggc cgtgtgcaac ccggcgggcg taatttcttt gattggcttg cttctgatat
     1921 ccaccaatgt gacgttgtcg cgattgtaag tctcatagta gtcggtatcg aggataagcc
     1981 gcttggtgcc gattggatga tcattggggc acagcagctc cgccgtcttg ggatccttaa
     2041 ccgtagcgcg gatcttccgg cgcacgtact ctgacgccgt ttcgttggac tccttgttaa
     2101 tcaagagatc tgtaaacgaa tataggaagc tgatgctgcc gccctcggcc cattttgcct
     2161 cataggcgtg tcgccgctcc gcctcggtta gatcgagtgc ggatttcacg ggcgccggat
     2221 acccggcaat cccgaatggc gtatcgaagg cggcgcggcg gcgctcggga tactgcgctt
     2281 tgtgagcgct ctctttttcg gggttcattg gcgcattgcg tgcgggcagg ctgaaattgg
     2341 ctgtccgctg gaagacgtaa aggtgcttcg cctgctttgc gataatgggt atcgactgga
     2401 cgccggatga cccggttcca attactccta ctcgcaattc gctgaaatcg actccttcat
     2461 cgggccataa cccggtatg
//
LOCUS       DATILV010000452         2464 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1388193, whole genome shotgun sequence.
ACCESSION   DATILV010000452 DATILV010000000
VERSION     DATILV010000452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2464)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2464)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2464
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1388193"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(429..1520)
                     /locus_tag="VLJ17_10310"
     CDS             complement(429..1520)
                     /locus_tag="VLJ17_10310"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV23409.1"
                     /translation="MTRTLFPSGGFAKEELGDDWKPAPDTTEASAGIGRREFMTLLGG
                     ALLAWPLAARAQQDERLRRIGVLMTLAANDPQAQARNAAFLQGLHELGRTIGRNVQID
                     HRWATGGVDDTRRHAAELAALAPDVILASGSTALESLLLATRTVPIVFVAVPDPVGAC
                     FVDSLARPGGNATGFTATTTFEYGIGAKWLELLKQIAPGVTRAAVILDPVTTAGIGQW
                     SAIQAAAPTIGLETVPVNIRDGGMNRTLAAFARASNVGLIVTASAFSLVQRDAIVDLV
                     ARHKLPAVYYERSFVAAGGLISYGPDFLDPYRRAGAYVDRILKGEKPADLPVQTATKY
                     EIVMNRKTAHALGLDIPAAVLARIDEVIE"
     gene            1810..2361
                     /locus_tag="VLJ17_10315"
     CDS             1810..2361
                     /locus_tag="VLJ17_10315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:1990397 - queuosine salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VUT family protein"
                     /protein_id="HSV23410.1"
                     /translation="MRRWIEGLIFLVLFGLTIPAANWLASNFGIFCVPNGPCLIWVAP
                     GVMTASGVLMIGIALVLRDLVQRRLGVGIAAVAVFAGAAISAFLAPPALVIASTVAFL
                     VSEYADLAVYTSLARRRFVAAVLASSLFGLVVDSILFLWLAYGSLEFLAGQIVGKTLM
                     IVVSMPFIMWLNSRDERLGLAPA"
BASE COUNT          412 a          762 c          756 g          534 t
ORIGIN      
        1 gcgccgcgcg gccgtcggcg gcgtaggcgc tttgccgcaa ttgcttggcg tgttcgagaa
       61 ccgcctcgat caattgctcc atttcgtgca ccccgtttcg ccgccgctat acgatacctg
      121 atctttccgc tttcgaaggc agaccggtcg tcagcggcag tgccgcgcga cggcagaaga
      181 cccgaagcgg tcctcggcct cataataaat tcgaggtgag gcgggcctgc cgtctcatgg
      241 gcggcgcctg acgtttgacc acttggatct atcctttgat caaatacatt ctcagcaagt
      301 tttttgtgtc tgcatatgtc gctcgggctc atcggtattt gttttttatt ccgtagcccg
      361 ggaaattcta ctttccagaa caagctccga gtttcacaca gcctgggcca tgagcggaca
      421 ttcgatactc attcgatcac ctcgtcgatg cgggcgagta cggccgccgg aatgtcgagg
      481 ccgagagcgt gtgcggtctt gcgattcatg acgatctcgt acttggtcgc cgtctgcacc
      541 ggcagatcgg ccggcttttc gcccttgagg atgcgatcga cataagcgcc cgcgcgccga
      601 tacgggtcaa ggaaatcagg cccatatgag atcaagccac ccgcggcgac gaaggagcgc
      661 tcgtagtaga ccgccggcag cttatgcctg gctaccaggt cgacgatcgc atcgcgctga
      721 acgagcgaaa atgcgcttgc cgtcacgatc agtcccacgt tcgaagcacg cgcaaacgcc
      781 gccagagtgc ggttcatccc gccgtcgcgt atgttgactg gcactgtctc caacccgatt
      841 gtcggcgccg ctgcctggat ggcgctccac tggccaatcc cagccgtcgt tacgggatcc
      901 aaaatgacgg ccgcccgtgt cactccgggc gcgatctgct tgagcagctc tagccatttc
      961 gcgccgatcc cgtattcgaa cgtcgtggtc gcggtaaaac cggtggcgtt gccgccgggc
     1021 cgcgccaggc tatcgacgaa gcaggcgccg accggatcag ggacggccac gaacacgatc
     1081 ggtacggtgc gggtcgccag cagcaacgac tccaatgctg tgctcccgga agctaggatg
     1141 acgtcgggcg caagcgcggc caattcggcc gcatgtctac gcgtgtcgtc gacaccgcct
     1201 gtggcccagc ggtggtcgat ttggacgttt cgcccgatgg tccggcccag ttcatgcagc
     1261 ccctgcagaa atgccgcgtt gcgggcttgt gcctgcggat cgttcgcggc gagcgtcatg
     1321 agcacgccga tacgccgcag gcgttcgtct tgctgcgcgc gcgccgcgag cggccaggcg
     1381 agcagcgcgc caccgagcag cgtcatgaac tcgcgtcgcc ctatgcctgc gctggcctct
     1441 gtggtatcgg gagccggctt ccaatcgtca ccgagctctt cctttgcgaa accgccgctt
     1501 gggaataacg tccgcgtcaa gttgtgcgaa cgtcgccgag gactggcgta catgttaaaa
     1561 ccgctcaatt gttccgtggt gggtacttcg ccttgcaagc gtcgcgccat ccatggtcgc
     1621 ccactgcagg tcatgagatg ccaggaatca tttggctttt tctgtcatgc ttgatggtca
     1681 gggctgttaa tgggtaaaat ccccaaagtg tggggcaaat cacccagcat gcggtgaccg
     1741 aaccacgcag gatggcgatg ctgcacggcg caacaagctt ccagtgctca tcgggaggca
     1801 gcgaacgaga tgagacgctg gatcgagggg ttgatatttt tggtcctttt cggcctgacg
     1861 attccggcgg ccaactggct cgccagcaac tttggtattt tctgcgtgcc gaacggcccg
     1921 tgtttgattt gggtcgcgcc cggtgtgatg acggcctcgg gcgtgttaat gatcgggatt
     1981 gcgctggtgt tacgcgactt ggtgcagcgg cgtctcggag ttggcattgc ggcagtcgcc
     2041 gtgtttgccg gggcggcaat ctccgctttc ttggcgcccc ccgcgctggt gattgcgtcc
     2101 acggtcgcat ttctggtctc cgagtacgcc gaccttgcag tctatacgtc gcttgcgcgg
     2161 cgtcgattcg tcgcggccgt gttggcctcc agtcttttcg ggctcgtggt tgattcaatc
     2221 ctgttcctgt ggctcgccta tggatcgctt gagttcctgg ccggccaaat cgtcggcaag
     2281 acgttgatga tcgtcgtgtc aatgccattc atcatgtggc tgaactctcg cgacgagcgc
     2341 ctggggctcg cgcccgcctg aggcgccgtt cgtcgccata ccccaccaag cctcagggcg
     2401 caataagcgt agcgcattgc gccgctccgg cgcgaaagcc gcgtgacgcc gccgccaccg
     2461 cccc
//
LOCUS       DATILV010000453         3646 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2665651, whole genome shotgun sequence.
ACCESSION   DATILV010000453 DATILV010000000
VERSION     DATILV010000453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3646)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3646)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3646
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2665651"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(231..998)
                     /locus_tag="VLJ17_10320"
     CDS             complement(231..998)
                     /locus_tag="VLJ17_10320"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSV23411.1"
                     /translation="MIANRKICVVLPAYNAARTLEMTFHEIPADVIDDVILVDDASTD
                     DTLRLATKLGVFAVRHDYNKGYGGNQKTCYRLALERGADIVIMLHPDYQYTPKLLLPM
                     ASMLCSGLFDVVLGSRILGIGARAGGMPLYKYMANRVLTFVQNILIGHKLSEYHTGYR
                     GFTRSVIEAVPLERNSNDFIFDNQMLSQIVYLGFRVGEISCPAKYFPEASSINFRRSV
                     IYGLGVLKTSISFRLARLGFDRGTIFEGLPVAKKRLI"
     gene            1324..1866
                     /locus_tag="VLJ17_10325"
     CDS             1324..1866
                     /locus_tag="VLJ17_10325"
                     /inference="COORDINATES: protein motif:HMM:NF013460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HSV23412.1"
                     /translation="MTDCKTSNAYSLTARFLHWTTAVLVLIMLPLGVVIAAEWNGPLK
                     DPLYDLHRSIGAVIIPLVIFRLGYRLTHPPLALPDDIPPLQQLAAHATHWGLYALLIV
                     QPFVGWVATSAYPAPIWVFGLFQLPPIWSQDRPLSDRLFVVHGLIAAVIACLAAAHIA
                     AALHHHFVRKDRILMRMITG"
     gene            2166..>3646
                     /locus_tag="VLJ17_10330"
     CDS             2166..>3646
                     /locus_tag="VLJ17_10330"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HSV23413.1"
                     /translation="MTGIRPSLSNDPLFHAPSGMTAQQAAIERTNIRVATAVDGQFMA
                     RHLYFLMLLICGGVGLLSVALGPDNYWDLRYYHLYAPWAYLHDRYLYDIGPAQEQGFL
                     NPTADLLLYGLIASPLNQTPRIVAFIMGATHGINAAVLFAIGCHVIRPFQAAERWTLR
                     AAAWLMGVSGAGFVSLVGTSTNDLTSSLFVMGALLGVLKVAGPENERWTRLGFAGSGL
                     LAGIGIGLKYTSAVYIPGLGAVALLATARRRTVSGLIVFGGGALLGFLAVAGHHMLAL
                     WQTFGNPTFPYLNQIFQSPYWEPDAVRDVRFIPQDFWQLITYPFYWTTVDTYIVAEPP
                     FRDWRAAIAYIAMAAGLLAFAVRYVRNGYRRDGTSAQTCGLDLILTFVIVSYFSWALG
                     FGYYRYAIPLEMLTGVVTVGALIWLFGDHRLRVVVAILLLTVAATSTVYLDWGRGRFG
                     DRYVDVHVPPLPAHSVVLIATWDPVAFFIPFAEPTVRFLGIEN"
BASE COUNT          731 a         1031 c          991 g          893 t
ORIGIN      
        1 cgcacgcaaa ccgaccagcc gatctggtgg aaggagacgg tgtgcgccga aaacaacgtg
       61 catgtcagcg tcggcaatga aatctatttc ctgagcgggg acagcttgct catgcccgcc
      121 aagaggggtc agccgccgcc ggatttgcgg tatttcactc gcccgcagaa gtgagtccgg
      181 caaatgcaag aagtcatgct ccaaagatca gacggcccaa caggctgcgt tcagatcaac
      241 cttttctttg cgaccgggag cccttcaaat atcgtaccgc gatcaaagcc taagcgcgct
      301 agtctaaagc tgatgctggt ctttaatacg ccgagaccat aaatcacgct gcgacgaaaa
      361 ttaatagagg aagcctctgg aaagtatttt gccggacaag atatttctcc aaccctgaat
      421 cccagataca caatttgcga taacatttga ttgtcaaata tgaagtcatt tgaatttcgc
      481 tccaacggaa cggcctcaat aactgatcgt gtaaacccac gatatcccgt atgatattca
      541 gatagcttgt gtccaataag tatattctgg acaaaagtaa gaacgcgatt cgccatatat
      601 ttatataaag gcataccgcc ggcgcgcgca ccgatgccaa gaatgcgcga gcccaagaca
      661 acgtcaaata atcccgaaca cagcatcgac gccattggga gcaatagctt cggcgtatat
      721 tgataatccg gatgcaacat aatgacgatg tcggcgcctc gctccagtgc caagcgatag
      781 caggtcttct ggtttccacc atagccttta ttataatcat gtcgaactgc aaagacgccg
      841 agttttgttg ccaatcgcaa tgtgtcgtct gtgctcgcat cgtcaaccaa gatgacgtcg
      901 tcgatgacgt cggcgggaat ctcgtgaaac gtcatttcga gcgtccgcgc cgcattatag
      961 gcgggtagga caacgcaaat cttgcggttt gcgatcattg gcttcgttct attgcatgtc
     1021 tggcagcatg aggagtatca acatagagcg aattcccatc actttaaact atttctccgg
     1081 actcacagcc agattcgtcg cgactatcta cgcttgcatg ctcagctgtc gcaagaaagc
     1141 cacagatgcc gacgacgagc gcgagcatca cggtggagag attattcgat ctcatcgaaa
     1201 tgcgcctcgt gggaatttgc ttcaccttcc cagatcctcc ataagttgtt aacatgaaat
     1261 ttgattcacg gacatctgtt gagaatcatt gggagcgcgt tgatttcgca gaagggggct
     1321 cgcatgactg attgcaaaac atcgaacgcc tacagcttga cggcgcggtt tctgcactgg
     1381 accacggccg ttctggttct gatcatgctt ccgctcggcg tcgtcatcgc ggccgagtgg
     1441 aatgggccgc tgaaagaccc tctctatgat ctgcaccgct cgatcggcgc tgtgatcatt
     1501 ccgcttgtca tcttccggct cggctatcgt ttgacgcacc cgccattagc gttgcccgat
     1561 gacatcccac cgcttcagca gctggccgct cacgcgacac attggggact ctacgcgctg
     1621 ctgatcgtgc aaccgttcgt cggctgggtg gccacgtcgg cctatccagc accgatctgg
     1681 gtattcggat tgttccagct gccgcccatc tggtcgcagg accgccccct ctccgacagg
     1741 ctttttgtgg tccatgggct aatcgctgcc gttatagcct gccttgctgc tgcgcacatc
     1801 gcggcggcac ttcatcacca tttcgtgcgc aaggaccgca tccttatgcg catgatcacg
     1861 ggctgaccac tgctccctcg gcatccgtat cggcgggcgg cggactttgg cctatcttgc
     1921 ttgcggatcg tttgaaaccg gcacatggtg ccgcagagat cgagtcgtcc gtgagggctg
     1981 ttggccttgt cttcgactag aacaagttcc gataagatcg atgcacctct ccggcgtcat
     2041 gcccgcgctt gtcgcgcttg tcgtgggcat cgacgttttt ttgtcaagat tccgcaagca
     2101 agacgtggat ggccgggacg agccaggacg agcccggccg tgactctgga gaagttgggt
     2161 tcaacatgac cgggatccgt ccaagtctgt caaacgatcc gctgttccac gcaccgtccg
     2221 gcatgaccgc tcaacaggct gcaatcgagc gcacgaatat ccgggttgca accgccgtcg
     2281 acgggcaatt catggcacgg catctttact ttttgatgct gctcatctgt ggcggcgtgg
     2341 gtttgctgtc ggtcgctttg gggcccgata actattggga tctgcgctat tatcatctct
     2401 atgcgccatg ggcgtattta catgaccgct acctctacga tatcggtccc gctcaagagc
     2461 agggctttct caatccgaca gcggacctgc tgctttacgg gctgatcgcc tcgcccctca
     2521 atcaaacccc gcgcatcgtg gcgttcatta tgggcgcgac acacggcatc aatgccgcgg
     2581 tgcttttcgc gattggctgc cacgtcatcc gtccctttca ggctgctgag cgttggacgc
     2641 tgagagccgc tgcctggctg atgggcgtct ccggcgccgg gttcgtatcc ctggtcggaa
     2701 catcgaccaa tgatctcaca agttcactgt tcgtgatggg tgcgttgtta ggcgttctca
     2761 aggtcgccgg accagagaac gagcgctgga cccggctcgg ctttgctggc tcgggattac
     2821 tggccgggat cgggattggg ctcaaatata cgtcagcggt ttatatacct ggattgggcg
     2881 ccgtcgcgct tctcgcaacg gcacggcgtc ggaccgttag cggtctgatc gtgtttggtg
     2941 gaggggccct gctgggattt cttgcagtcg cagggcatca catgctggcc ctgtggcaga
     3001 cctttggcaa cccgacattt ccatacctca atcagatttt tcaatcgccg tactgggaac
     3061 ccgacgcggt ccgtgatgtg cgattcatac cgcaagattt ctggcagtta atcacgtatc
     3121 cgttttattg gacaacagtg gacacctata tcgtggcgga gccgccgttc cgcgactggc
     3181 gcgctgccat tgcctatatt gcgatggcgg ccggccttct ggcgtttgcg gtgcgctatg
     3241 tgcgtaatgg ttatcgtcgc gacggcacct ctgcgcagac atgcggtctc gatctcattc
     3301 tcacgtttgt catcgtgtct tatttctctt gggcgctcgg cttcggctac taccgatacg
     3361 ccattccgct ggaaatgctg acgggcgtcg tcacggtggg cgcattgatc tggctctttg
     3421 gagatcaccg tctgcgcgtt gtcgtcgcca tcttgttgtt gaccgttgcc gccacctcca
     3481 cggtctatct tgattggggt cgcggccggt ttggagatcg atatgtcgac gtccacgtgc
     3541 cgccgctgcc ggcgcatagc gtcgtactga ttgccacttg ggatccggtg gcgtttttca
     3601 ttccgttcgc cgagccgacg gtccgatttc tgggaatcga aaataa
//
LOCUS       DATILV010000454         2894 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2153871, whole genome shotgun sequence.
ACCESSION   DATILV010000454 DATILV010000000
VERSION     DATILV010000454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2894)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2894)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2894
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2153871"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            415..831
                     /locus_tag="VLJ17_10335"
     CDS             415..831
                     /locus_tag="VLJ17_10335"
                     /inference="COORDINATES: protein motif:HMM:NF019095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHRD domain-containing protein"
                     /protein_id="HSV23414.1"
                     /translation="MSTIVFRFGLTGLALAVGLAWQAPATAAPVTFKADLKDAKGKGH
                     GNVTASLDNNVLSWTVRYSGLSEKPSAAHFHGPAESGQSAGIQVNSTDLSNPMRGTLA
                     LSPGQVVDLMANRWYFNIHTKKNPGGEARGQLVRAK"
     gene            complement(1119..1565)
                     /locus_tag="VLJ17_10340"
     CDS             complement(1119..1565)
                     /locus_tag="VLJ17_10340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23415.1"
                     /translation="MAREVSVVASPAVGVALLAGFVRHEGRAPMMPLHLFRSPTFSGN
                     LLTLLLYGALGGAFFLLPFAATQARIFRDAGRRRVPAVHTDHGTDVALVRRSARARRR
                     AAPVDRPRDHQQQIDLPCNAVMPSAIGGLSGLSQARRAGAFNEFTL"
     gene            complement(1761..2078)
                     /locus_tag="VLJ17_10345"
     CDS             complement(1761..2078)
                     /locus_tag="VLJ17_10345"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV23416.1"
                     /translation="MFVHTLCLSAFLLVGGAAGGQLGRRRHSIAGIALFAVASVGSGV
                     SANVTQLTAARAIQGIGAALLIPCSLAIIGASFPESERGRVIGTWAGFSAIAAAIGPL
                     LGG"
     gene            2084..2458
                     /locus_tag="VLJ17_10350"
     CDS             2084..2458
                     /locus_tag="VLJ17_10350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23417.1"
                     /translation="MSADDFPGRVILDVRRAGIPVGYDAARVEHVDGVVDLAFDQHAK
                     PPFPLEQGVLRGSVVLVTMANPTIEPSSPWMALRTASAQNLLPPFWRLQPSVWKRPCW
                     LAAARAFCGRPSLQSSSVKKGK"
BASE COUNT          554 a          881 c          937 g          522 t
ORIGIN      
        1 gcgcgttcgt cgacgaggag cttgctgtcg acgaggaacg tgaagtcccc cttctgagtt
       61 aagagtctgt tccatccact ggcggtcgat agtactgcga gaattgtttt ctgcagggtc
      121 cgctccaatg ccaaggcggt catctgcaac cactaatttc gtgctcaatc gtttgatcgg
      181 tctcaatcga agggggatgg ggcgatgttt gagctgatga cggagaatga ggacttcaag
      241 ccggcgctgc gacctgaaca ggttggcaac aaacgtgcca acaagtcgga ggatcgcaag
      301 ctttgcgccg ggtgacggtt tgattctgcc tcaccgcgcg gatcgctcgg atggaatttt
      361 cgggaacgac aggtgtttag gcggatgtca gaccatctct cagggaggat atccatgtcg
      421 acgatcgttt tccgcttcgg tcttaccggc ttggcgttgg ctgttggtct tgcctggcag
      481 gcgccggcga cggccgcacc cgtcacattt aaagctgatc tgaaagacgc gaagggcaag
      541 ggccacggca acgtcacggc gtcgttggac aacaacgtct tgtcctggac agtgaggtac
      601 tccgggctaa gcgagaagcc gtcagcggcc catttccatg gacccgccga gtcgggccag
      661 agtgccggaa ttcaggtcaa ctccaccgat ctttccaatc cgatgcgcgg cacattggcg
      721 ctctctcctg ggcaggtcgt cgacctcatg gcgaaccggt ggtatttcaa catccatacc
      781 aaaaagaatc cgggcggtga ggctcgtggc cagctcgtga gggccaagtg atcgcgctgc
      841 gggagggcga tcaacgatag cattcgccga gggcgccgcg cgtctcgctg ttgctaccca
      901 cggtccgcgc attgccctgg agaccgaaca gcacaacgcc agcggcggcg gcaccttgcc
      961 gccgccgctg tacggtcggc cgttacaccg acatcggcct cttgtcccga tcgattgaat
     1021 cggcgacagg cgccccgcgg cgcccccgcg ccaagcggga ccgatctacc taggacgcgt
     1081 tccccagcca agttgaatcg gaaacgcgct ctaacttctt agagcgtgaa ctcattaaac
     1141 gcgccggcgc ggcgggcttg cgagagtccg ctcaagcctc cgattgccga cggcatcacc
     1201 gcattgcagg gaaggtcgat ttgctgttga tggtctcgcg ggcgatcaac gggagccgcg
     1261 cgccgacgcg ctcgagcaga ccgccggacc agcgcgacat cagtcccatg atcagtgtga
     1321 acagcaggaa cacggcgccg gccagcgtcg cggaatatcc gtgcctgggt ggcggcgaac
     1381 ggcaggagga agaaggcgcc gccaagcgcg ccgtagagca gcagcgtcag caggttgccg
     1441 ctgaaggtgg gtgaacgaaa tagatgaagc ggcatcatcg gtgcccgccc ctcgtgcctg
     1501 acaaagccgg cgagcagcgc gacgccgact gcgggcgagg cgacgacgga tacctcgcgc
     1561 gccactgtcg gtcagtgcga tcaccccgaa tgcgatgccg ccccggccgc cgaacgccag
     1621 cagtgagccg gccagtcgat gacccggggc gcttgcggat cgaagcgctc cgacacatga
     1681 cgccaggcga tccagacggc gggcagggcg agcaacggat tgacgagaaa gatcgcctgc
     1741 caggtgaggt ggtcgacggt tcagccgccc agcagggggc cgatggcggc agcgatggcg
     1801 gagaaccccg cccaggttcc gatcacccgg ccgcgctcgg attccggaaa tgatgcgccg
     1861 atgatcgcca gcgagcacgg aatgaggagc gcggcgccga tgccctggat cgcccgggcg
     1921 gcagtcagct gcgtcacgtt cgcagacacg ccggatccga cggaggcgac ggcgaacagg
     1981 gcaatgccgg cgatggaatg ccggcggcgg ccaagctggc cgccggccgc gccgccgacc
     2041 agcaggaatg ccgacagaca aagcgtgtgt acaaacaact gaaatgtcgg ccgatgactt
     2101 tcccggccgt gtaatccttg atgtgcgtcg cgccggcatt ccagttggtt atgatgccgc
     2161 tcgggtcgag catgtagatg gcgtagtcga cctcgccttc gatcagcatg cgaaaccgcc
     2221 gtttcctctc gagcaaggcg tcttgcgcgg ttcggtggtc ctggtgacca tggcaaatcc
     2281 gacgatcgag ccgtcgtcgc cgtggatggc gttgaggacg gcgtccgccc agaatttgct
     2341 gccgcccttt tggcgcctcc agccttcggt ctggaaacgg ccgtgctggc ttgccgccgc
     2401 aagggctttt tgcggcagac cgagccttca gtcctcctcg gtaaaaaaag ggaaatagtt
     2461 ctgaccgatg atctcgttcg cggcgtagcc cttcatcctc tgggcgccgg ctttccagct
     2521 gccgaccgtt ctgtcgccgg atggaggtag atcgcattgt cggtacactt tgtaccaaaa
     2581 ggtcaaacgg ttacgacatc gtcggcacgg ccggatttcg tcaggcttgc gggcgtttcg
     2641 acggggctga ataggcccat ggcccccgtt tgaacgactc tcgagcgctg ctgttgcggt
     2701 gatcgagcga tcgctcgacg cactccgacc acaatccccc ccggaaatgg ttccgcgatt
     2761 gcgaagattc gccaattcgg agccaaacgc agcaatcccg gacaagtgcc aagtcgtatt
     2821 ttttgccacg cttgggctct gagggattgt gggcgcgggc ggaacccgtt cgaccgctga
     2881 tcctccacgg cgac
//
LOCUS       DATILV010000455         5090 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2920759, whole genome shotgun sequence.
ACCESSION   DATILV010000455 DATILV010000000
VERSION     DATILV010000455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5090
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2920759"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..882
                     /locus_tag="VLJ17_10355"
     CDS             <1..882
                     /locus_tag="VLJ17_10355"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC oxidoreductase"
                     /protein_id="HSV23418.1"
                     /translation="EVIVSGGAFSTPQILMLSGIGPAVHLREVGVDPVIDLPVGRNLQ
                     DHLAVFLSFARSEPGPFHHQMRFDRTAVSMIRAWLFGTGSATVVPGGLHAFIKTRPEI
                     AVPDIEFMFRGAATDARLWYPVIRPPRPDGFAIRPTLLHPDSRGEILLRSNDPCEPMR
                     IVYNFFSAPNDLPKLREGFRLARHIAYQRPLDRFRGVETAPGPSHQSDTEIDAYIRKT
                     AITAHHPAATCPMGLGSDAVLDPQMRVRGIEGLRVVDASAMPDLVSAHLNAAVLMMAE
                     KAADLIKGKSAPASAAI"
     gene            1189..1485
                     /locus_tag="VLJ17_10360"
     CDS             1189..1485
                     /locus_tag="VLJ17_10360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23419.1"
                     /translation="MSNATAQRRVDLDAIRNHAVMAPEKGPEIKAANENTGNDANNKV
                     RPVAPVVLCGDDARQGVTGHNVRYVLGFGLLGAVVGIATVAFVVGYSFAVMPPG"
     gene            complement(1574..3166)
                     /gene="purH"
                     /locus_tag="VLJ17_10365"
     CDS             complement(1574..3166)
                     /gene="purH"
                     /locus_tag="VLJ17_10365"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014438890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0003937 - IMP cyclohydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0004643 -
                     phosphoribosylaminoimidazolecarboxamide formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HSV23420.1"
                     /translation="MLENLRRISRAILSVSDKTGLVEFAQRLDGFGVELISTGGTART
                     LAEAGLKVRDVSDLTGFPEMMDGRVKTLHPKIHGGLLAVRHNAEHVRTMQGHHIPAID
                     LVVVNLYPFEATVVKGASFDDCIENIDIGGPAMIRSAAKNHVDVAVIVEPDDYAVLIA
                     ELSAHKGMTSHALRRQLAAKAYARTAAYDATISNWFTGELRDDAPDFRAFGGRLVEAL
                     RYGENPHQTAAFYRTPDCRAGVASARQVQGKQLSYNNINDTDAAYECVAEFDPARTAA
                     CVIVKHANPCGAAEGASLLDAYRKALACDPVSAYGGIVALNRPLDADAARAITDIFTE
                     VIIAPEASTEAIEIIGAKKNLRLLVAGGLPNARAGGLTVKSVAGGLLVQSRDNAVVDE
                     MQLSTVTKRAPTAAELSDLRFAFRIAKHVKSNTIIYAKDGATVGIGAGQMSRVDAARI
                     AARKAEDAAREAGLPTPRTRGSVVASDAFFPFADGLLVAIEAGATAVIQPGGSLRDNE
                     VIKAADDHGIAMVFTGTRHFRH"
     gene            complement(3280..5010)
                     /locus_tag="VLJ17_10370"
     CDS             complement(3280..5010)
                     /locus_tag="VLJ17_10370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heparinase II/III family protein"
                     /protein_id="HSV23421.1"
                     /translation="MSRAVIAERFRLSWLALRRRFSVLTGRAIVHPVARLVYWPSGSE
                     RLVIAPQELRTADPTRANEIYGGRFAFAGKIVVCDGRSPFEVEPPTDEWAEILLGFGW
                     LRHLRGANSTITRANARALVDEWITTQGSWHRIGWQPEIVARRIMSWLSQATLILDDA
                     DLRFYRRLLRNLTRQVRFLRATVNDTRDGVPRLQARIALTYAALCMAKQVRHLRVATR
                     RLVAELERQILPDGGHISRNPGVIIEILLDLLPLGQAFAARNVAPPPALINAVDRMMP
                     MLRFFRHADGTFMLFNGMGPTPPELLATVLAYDDARGTPVANAPYSGYQRLEAGASTL
                     LMDTGGPPPLEVSADGHAGSLAFEFSSRQQRIIVNCGMPAAGRENWRQVARATAAHST
                     VTFNDSSSCHFLDSNVFRRVFGVPIVDGPHQVTVSRDNGGRAMLLRATHDGYAERFGI
                     VHERFVSLSADGNKLDGEDVFSPSNGSALPQDAEDYFAVRFHLHPAIRASRLTDGHGV
                     VLLLPNRDVWNLNTHEDVVVVEESVYLAGQDGPRRTMQIVIYGQARGNQRVHWTLSHV
                     RQLAITAQSK"
BASE COUNT         1012 a         1548 c         1546 g          984 t
ORIGIN      
        1 gaggtgatcg tttcgggggg cgcgttcagc acgccgcaaa ttctgatgtt gtccggcatc
       61 gggccggccg tgcatctgcg cgaggtcggg gtcgatccgg tcattgatct gccggtcggc
      121 cgcaatcttc aggaccacct cgccgtattt ctgtctttcg cgcgttctga gcccggaccg
      181 ttccatcatc agatgagatt tgaccgcacg gcagtcagca tgatccgggc ttggctgttc
      241 ggcaccggct ccgcgaccgt agtgccgggc gggctgcatg ccttcatcaa aacgcgcccc
      301 gagatcgcgg tgccggacat cgagttcatg tttcgcggtg cagcgacaga tgcgcgtctg
      361 tggtatccgg tgatccgccc accacgaccg gacggctttg caatccgacc gactttgctc
      421 catcccgaca gccgcggcga aattctgctg cgctcgaacg acccctgcga gccgatgcgg
      481 atcgtctaca atttcttttc ggcgcccaac gacctgccga aattgcgtga gggcttccgg
      541 ctcgcacgcc acatcgccta tcagcggccc ctcgatcggt ttcggggcgt cgagaccgcg
      601 cccggtccgt cccaccagag cgacaccgaa atcgatgcct acatccgcaa aaccgccata
      661 acggcacatc atccggcggc gacgtgcccg atgggccttg gctccgatgc cgtgttggac
      721 ccacaaatgc gggtgcgcgg catcgaaggc ttgcgcgtcg tcgatgcgtc ggcgatgccg
      781 gacctcgtct ccgcccacct caatgccgcg gttctgatga tggcggaaaa ggccgccgac
      841 ctgattaaag gcaagtctgc gccggcaagc gccgcaattt agcgcgcgtt ctgacaacgc
      901 cttgcgctgc cgccggttgc aaacggcagc cattcacgtg ccgcggtgcg cggcgcccac
      961 tgaaacaacg cattgcgcgg tcgttacttt ttcgatttcg cgccggatat atcgatgatg
     1021 atgcggctca cattttattt gcagacaatg aatgaatgca aaatgttttg ccgtgatgcg
     1081 ccttcacttt gcccagacat gatcacgctg ccgggctgat gggctcttct tgtcgtcgga
     1141 ttgcgacgga gaatatcacg cagggcgagt aaaaaagtgg gggatctcat gagcaacgcc
     1201 accgcgcaga ggcgcgtcga tcttgacgct atccgtaacc atgcagtcat ggctccagaa
     1261 aaagggccgg agatcaaggc tgccaatgag aacactggaa acgacgcgaa caataaagtg
     1321 cggccagttg cgcctgtggt gctgtgtgga gatgacgcga gacaaggagt cacgggccac
     1381 aacgtccgct atgttctggg atttgggctt ttgggtgccg tcgtagggat tgcgaccgtc
     1441 gcattcgttg ttggttacag cttcgctgtc atgccgccgg gataacgacg attgcgtgcc
     1501 agcacggcca ccggaaccgc gcgatcatcc ggcggatagc aaaaatttca ggagtagttg
     1561 ttgcgggtgt tcttcagtgt cggaaatgcc gggtaccggt aaacaccatg gcgatgccgt
     1621 gatcgtctgc cgccttgatg acctcgttgt cgcgcaacga gccgcccggc tggatcaccg
     1681 cagtggcacc cgcctcgatc gcgactagaa gcccgtcagc gaacgggaag aatgcatcgg
     1741 acgccacaac ggatccgcgg gtgcgcggtg tcggcaagcc tgcttctctc gcggcatcct
     1801 cggccttgcg cgccgctata cgggctgcat cgacccggct catctggccc gccccgatcc
     1861 caaccgtggc gccgtccttg gcgtaaataa tggtgttcga tttcacgtgc ttggcgattc
     1921 gaaacgcgaa ccgcagatcg gatagttcag ccgcggtcgg cgcccgcttg gttacggtgc
     1981 tcaactgcat ctcgtcgacc accgcattgt cgcgcgattg taccaggagc ccgccggcca
     2041 ccgatttgac cgtcagaccg cccgcgcgag cgttcggaag gccgccggcg accagcaacc
     2101 gcagattctt tttggcgccg atgatctcaa tcgcctcggt gctcgcctcc ggtgcgatga
     2161 tgacttccgt aaatatgtcc gtgatggcgc gggctgcgtc tgcatcaagc ggccggttca
     2221 acgccacaat gcctccgtat gccgaaaccg ggtcgcaggc gagcgccttg cgataggcat
     2281 cgaggaggct tgcgccttcc gccgcgccgc acggattggc atgcttgacg atgacgcagg
     2341 cggcggtgcg ggcggggtcg aattccgcga cgcattcgta ggccgcatcg gtatcgttga
     2401 tgttgttgta ggagagctgc ttgccctgaa cctgccgggc actggcaacg cccgcgcggc
     2461 agtccggcgt gcgatagaac gctgccgtct gatgcggatt ttcgccgtag cgaagcgctt
     2521 cgacaagacg gcctccgaaa gcacgaaaat ccggtgcgtc gtcccgaagt tcgcccgtaa
     2581 accaattgga gatggtggcg tcataggcgg cagtcctcgc ataggccttg gcggccagct
     2641 gtcggcgcaa tgcgtgcgag gtcatgccct tgtgggcgga caactcggcg atcaggaccg
     2701 catagtcgtc gggctcgaca ataacggcga cgtcgacgtg attcttggcg gccgaccgga
     2761 tcatggcagg ccccccgata tcgatatttt cgatgcaatc atcgaagctc gctcccttca
     2821 ccaccgtcgc ctcaaaaggg tagagattca ccaccacgag atcgattgcc ggaatatgat
     2881 ggccctgcat ggtgcggaca tgttcggcat tatggcggac cgccaacaac ccaccatgga
     2941 ttttcggatg cagggtcttg acccgaccgt ccatcatttc cgggaatccc gtaaggtcgg
     3001 acacgtcgcg caccttgagg ccagcctctg cgagggtgcg cgcggtgcct ccggtggaaa
     3061 tcagctcgac gccgaaaccg tccagccgct gggcgaactc caccagtccg gtcttgtcag
     3121 ataccgaaag aatggctcgg gaaatgcggc gcagattttc aagcatggca gcaatctacc
     3181 aattgcgggg ggagctttcg cggttagcag aattgtgggc aacttgccaa cgcggcgttc
     3241 tcagggctgt gtatggcggc agcgcgaatt cgggctatat catttcgact gggccgtgat
     3301 ggcaagttgc cgtacatggc tcaaagtcca gtgcacgcgt tggttccccc gagcctggcc
     3361 ataaatcacg atctgcatgg tgcgccgcgg gccgtcctgg cctgccaaat agacgctttc
     3421 ctccactacc accacgtcct cgtgggtgtt gaggttccaa acgtccctgt tgggcagcag
     3481 aagcacaacc ccgtgcccat ccgtcaaacg gctggcgcga atggcgggat ggagatggaa
     3541 gcgaaccgca aagtagtcct cggcgtcctg cggaagggca cttccgttag atggcgagaa
     3601 aacgtcttcg ccatcgagct tgttgccgtc cgccgaaagc gaaacgaagc gttcatgaac
     3661 aattccgaaa cgttccgcat agccatcatg ggtggcgcgc agcagcatcg ctcggcctcc
     3721 attgtctcga gagaccgtca cctgatgggg gccatcgacg atcggaacgc cgaacacgcg
     3781 tctgaacacg ttagaatcga gaaaatgaca cgacgaggag tcgttgaacg tgacggtgga
     3841 gtgcgccgcg gtcgcgcggg cgacttgccg ccaattttcc cgcccggcag ccggcatgcc
     3901 acagttcacg atgattcgct gctgcctgct tgagaattcg aaagcgagac tgcccgcatg
     3961 gccgtcggcg cttacctcca gaggcggcgg accgccggtg tccatcaaca aagtgctggc
     4021 gccagcttcg aggcgctgat accccgaata gggtgcgttg gcaaccggag tcccgcgcgc
     4081 gtcgtcgtag gcgagaaccg tcgctaacag ctctggcggc gtcgggccca tgccattgaa
     4141 aagcatgaag gttccgtctg cgtgccggaa gaaccgcagc atcggcatca tgcgatcgac
     4201 ggcattgatg agggcaggag gcggggccac attgcgcgcc gcaaaggctt ggcccaacgg
     4261 cagcagatca agcagtattt cgataatgac ccccggattg cggctgatat ggccaccatc
     4321 gggtaagatt tggcgctcca attcggcgac taggcgccgc gtcgccacac gcagatggcg
     4381 aacctgctta gccatacaaa gcgccgcgta agtcaacgcg attcgtgctt gcaaccgcgg
     4441 tacgccatcg cgtgtatcat ttacggtggc acgcagaaaa cgaacctgcc gtgtcaggtt
     4501 gcgcagcaac cgccgataga acctcaaatc agcgtcgtcg agaatgagcg tggcttggct
     4561 gagccatgac atgattcgcc gcgcaacaat ttcaggctgc cacccgatcc ggtgccaaga
     4621 accttgcgtc gtgatccatt cgtcgacaag agcacgagcg ttggcgcgcg ttatggttga
     4681 attggcgcca cgcagatggc gcaaccagcc gaatccaagc aagatctcgg cccattcatc
     4741 ggtgggaggc tccacttcga acggcgagcg gccatcacaa accacgatct ttccggcaaa
     4801 cgcgaaccgt ccgccataaa tttcattggc tcgtgtcggg tcggccgtgc gcaactcctg
     4861 aggtgcaatg accaggcgtt cgctgccgga gggccaatag accaatcgcg ccacggggtg
     4921 aactatcgct ctccccgtga ggacgctgaa cctgcgtcga agcgccagcc aagacagacg
     4981 gaagcgctcc gcgatgacag cgcgggacat taaggctagc ccctcctcgt cacaggcact
     5041 aacgtccgta taccctccgt ataccctttg agaatataac gaagggtaag
//
LOCUS       DATILV010000456         2817 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4963856, whole genome shotgun sequence.
ACCESSION   DATILV010000456 DATILV010000000
VERSION     DATILV010000456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2817)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2817)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2817
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4963856"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1355
                     /locus_tag="VLJ17_10375"
     CDS             <1..1355
                     /locus_tag="VLJ17_10375"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HSV23422.1"
                     /translation="VAAGHLPTLPAHAQEKDAAQALPLIRDAEIEQLLRDYTYPILRA
                     AGLGQRNIRIVIINDRGFNAFVIDAKRIFVNAGALMEAETPNQIIGVLAHETGHIAGG
                     HLSKLRGELANAQTAAILAMLLGLGAVAASAASRGNVGGNPMAAIVGPQTMIMRSLLA
                     YQRQQEEQADRAAVNFLNQSGQSAKGMYDTFKRFADQQLFASRYVDPYVQSHPMAAER
                     IAALAEVAKANTFWDKKDPPELQQRHDVVRAKLFGYLDQPDTLLRRYPLSNTSLAARY
                     ARAISSYRHSDLRTALGQIDSLIQTQPNNPYFLELKGQMLVDSGRSRDAIAPLRHAIS
                     LAPDPTLIHVLLAQALIGANDPALIDEAISNLRKALANDAEIADAYEHLAMAYGRKGN
                     LAEADLASAQAALNRGSLPTARQLASRAKGRFPIGSPGWVKADDIASYKPPQPRHLVP
                     "
     gene            1416..2171
                     /locus_tag="VLJ17_10380"
     CDS             1416..2171
                     /locus_tag="VLJ17_10380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HSV23423.1"
                     /translation="MKRLTGAGAAVLLTLALPVAAQEFSAPQKSEIERIIKDYLVSHP
                     EVLQEAIAELDKRQAAADLEKAKTAVANNAETLFNSSRHVVLGNPKGDVTLVEFFDYN
                     CGFCKRALADMLELLKDDVKLKVVLKEFPVLGPGSVEAAKVAVAVRMQDKSGKKYLEL
                     HQKLLGGRGQADKAHALAVAKEVGMDMKRIDADLASDEVKVSIEESLKLAETLGLNGT
                     PSYVVGTDVVIGAVGLEALRTKVSTARCGKAMC"
     gene            2332..>2817
                     /locus_tag="VLJ17_10385"
     CDS             2332..>2817
                     /locus_tag="VLJ17_10385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HSV23424.1"
                     /translation="MPPPSRIEWWLEGESALRWFDGIDLGVEAVAGDDKKKSNAVVDE
                     DVVRSLARLLDETRLTEIEIEQRGVRVRVARQVAVACAPPAIDASRTIPVAMPAGALD
                     PSQHPGVVASPMVGTAYRAPEPGAKPFCDVGSVVKAGDTLLIVEAMKTLNQIPAPKAG
                     TV"
BASE COUNT          579 a          884 c          852 g          502 t
ORIGIN      
        1 cggtcgcggc ggggcactta ccaaccttac cggcacacgc gcaggagaag gacgccgccc
       61 aagcgctgcc gctgattcgc gacgccgaga tcgagcaatt gctgcgcgac tatacctacc
      121 cgatcctgcg cgccgccggc ctcggtcaac gcaatatccg cattgtcatc atcaacgatc
      181 gcggcttcaa cgcgttcgtg attgacgcca agcgcatttt cgtcaatgcg ggcgcgttga
      241 tggaagccga aacgccgaac cagatcatcg gtgtgctcgc ccacgagacc ggtcatatcg
      301 cgggcggcca tctcagcaag ctgcggggcg agctggcgaa tgcccagacg gcggccattc
      361 tggccatgct gctcggcctc ggcgccgtcg ccgcatcggc ggccagccgc ggcaatgtcg
      421 gcggcaatcc gatggccgca attgtgggcc cgcaaacaat gatcatgcgc tcgctgcttg
      481 cctatcagcg tcagcaggag gagcaggccg atcgcgccgc ggtcaatttc ctgaaccaat
      541 ccggtcagtc cgccaagggc atgtatgaca ccttcaaacg atttgcggat caacaattgt
      601 tcgcgtcgcg ctacgtcgac ccctatgttc agtcgcaccc catggcggcc gagcgcatcg
      661 ctgcgctggc cgaagtggcg aaggccaata ccttttggga caagaaggat ccgccggagt
      721 tgcagcagcg ccacgatgtc gtccgcgcca aactattcgg ttacctcgac cagcccgaca
      781 cgctgctgcg ccgctatccg ctgagcaaca ccagcctcgc ggcacgctac gcccgcgcga
      841 tatccagcta tcgtcattcc gatttgcgca ccgctttggg acagatcgat tcgctgatcc
      901 agacgcagcc aaacaatccc tacttcctcg agcttaaggg ccagatgctg gtggattccg
      961 gccgttcgcg cgatgccatt gcgcctttgc gccacgctat ctcgttggca ccggacccga
     1021 ccctcatcca tgtgctgctc gctcaagctc tgatcggcgc caacgacccg gctttgatcg
     1081 atgaggcgat atccaacctg cgcaaagcgc tcgcaaacga tgcggagatc gccgacgcct
     1141 acgagcattt ggcaatggcc tatggtcgca aaggcaacct cgccgaggcg gaccttgcct
     1201 ctgcgcaggc ggctttgaac cgcggaagtc tgcccacggc gcggcaactg gcgagtcgcg
     1261 ccaagggacg ttttcccata ggatcacccg gatgggtcaa ggcggacgac atcgcgagct
     1321 acaagccgcc gcaaccgcgc cacctggtac cgtgatacac tgatgggtac cgcgataaat
     1381 tgatcgccaa cgagggattg agcatgcctc tgaagatgaa gagactaacc ggagccggcg
     1441 cagccgtgct gctgacgttg gcgctgccgg tcgcggcgca agagttctcc gcgccgcaaa
     1501 agagcgagat tgagcgtatc atcaaggact acctcgtgag ccacccagag gtgctccaag
     1561 aggcaattgc cgaactcgac aagcgtcaag ccgccgccga tctcgaaaag gccaagactg
     1621 ccgtcgccaa caatgccgag acactgttca attcaagccg gcacgtcgtg ctcggcaacc
     1681 ccaagggcga cgtcacacta gtcgagttct tcgactacaa ttgcggcttc tgcaagcgcg
     1741 ccctggcgga catgttagag ctgttgaagg acgacgttaa gctcaaggtt gtcctcaagg
     1801 aatttcctgt gctcggcccc ggatcggtcg aagccgccaa ggtggcggtc gcggtgcgca
     1861 tgcaggataa gagcggcaaa aagtaccttg aattacatca aaagcttctg ggggggcgcg
     1921 gtcaggctga caaagcacac gcgcttgcgg tcgccaagga agtcggcatg gacatgaagc
     1981 ggatcgacgc cgatttggca agcgatgagg tcaaggtttc gatcgaggag agcctcaagc
     2041 ttgccgagac gctcggactc aatggcaccc caagttatgt cgtcggcacc gacgtcgtga
     2101 ttggagcggt cggccttgag gcactgcgca ccaaggtgag cacggcgcgt tgcggcaagg
     2161 cgatgtgtta gggcgattcc aacaaagaaa tttgagctcc gtccgaactg gcgtagaagc
     2221 gcatcggcta tggccttgcg actggcggcc cccgcggcaa tgaccaagcc tgacagagta
     2281 cggcgtttct taaagttcga atgacaacca ccggcgcagg gcgggtttcg catgcccccg
     2341 ccatctcgta tcgaatggtg gttggaaggc gaatccgccc tacgttggtt tgatggaatc
     2401 gatctaggag ttgaggcggt ggcgggcgac gataaaaaga aatccaatgc ggtcgtggac
     2461 gaggatgtgg tgcgctcgct cgcgcggctt ctcgacgaaa ccaggctcac cgagattgaa
     2521 atcgagcagc gcggcgtgag ggtccgggtt gcccgtcagg tggcggtcgc ctgtgcacct
     2581 cccgccatcg acgcgtcccg tacgattccc gttgccatgc cggccggtgc actcgatccg
     2641 tcccagcatc ccggcgtcgt ggcatcaccg atggttggca ccgcctatcg cgcccccgag
     2701 ccaggcgcca agccgttctg cgacgtcggc tcggtggtca aggccggcga tacgctcctc
     2761 atcgttgaag ccatgaagac gctcaaccag attcccgccc ccaaagccgg cacggtc
//
LOCUS       DATILV010000457         1699 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4452484, whole genome shotgun sequence.
ACCESSION   DATILV010000457 DATILV010000000
VERSION     DATILV010000457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1699
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4452484"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..255
                     /locus_tag="VLJ17_10390"
     CDS             <1..255
                     /locus_tag="VLJ17_10390"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV23425.1"
                     /translation="EEAFLDAMVQVRLSRLRTGASRWALYRDGEKPRTFVETFTVASW
                     EEHLRQHHDRLTGADRDFDAKARGLSDPPSETRHLIATEG"
     gene            complement(371..>1699)
                     /locus_tag="VLJ17_10395"
     CDS             complement(371..>1699)
                     /locus_tag="VLJ17_10395"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HSV23426.1"
                     /translation="DANQLIAARVIQGVGAALLAPQTLTILMAIFPAERRGAAFGITG
                     AVIGVSTVAGPTLGGLIVTNGDWRWIFFLNVPIGILALVGTFLVIPDVRTARQHRLDL
                     IGVLLSSAALFAVVFGLIEGQRYDWSTITGWLTIPMVIGAGIALFVAFLAWERLQAEP
                     LVPLGLFRDRNFSLMNWTGAAMSFAMQGIFIPITIYTQSVLGMTALQSGLTIAPMSLT
                     AGIVAPFAGRLADRFGGKYLLMAGLALFGLGSAIVTGVATVTSTQLTFLLPWVLAGIG
                     LGLVFAPMTTIAMRDIKPAMAGAASGVLNTTRQLGSVIGAAVVGAVLQNQLASAFHDQ
                     AVTAATHLPRPFQQPFIDGFAQAAKSGLQVGRGQTGASLPPNLPASVVGAVQHLVHDV
                     FVNGYVVAMRPTVGVGVAVLAVASLSCLWVMNGRHRANAKLAPADVAAVA"
BASE COUNT          350 a          537 c          556 g          256 t
ORIGIN      
        1 gaggaagcct tccttgacgc catggtgcag gtgcgcctgt cgcgcctacg gacaggcgcg
       61 agtcgatggg cactctatcg cgatggtgaa aaaccccgca cctttgtcga gacattcacc
      121 gttgcctcct gggaagaaca cttgcgccag caccatgacc gcctcaccgg cgcggatcgc
      181 gacttcgatg cgaaggcgcg aggcctttcc gacccgccct cggagacgag gcatttgatc
      241 gccaccgagg gctagcgtta aatcagctga tcgaccccgt accacggtcg gatgtcagcg
      301 ggccgatcct acctgaggcg ccggtcaaca ggacattgcg atgcgtgagc tctttcattt
      361 agttccttcc ttaggcgaca gcggcaacgt ccgccggtgc cagcttcgca ttggcacgat
      421 gacgaccatt catcacccat agacagctga gcgatgcgac cgctaggacc gccaccccga
      481 cgccgacggt cggccgcatg gcgaccacat agccgttaac aaagacgtcg tggaccagat
      541 gctgaacggc cccaacaacg gacgccggca ggttgggcgg cagcgacgcg cccgtctggc
      601 cacggccgac ctgaaggccg gacttcgcgg cctgcgcgaa gccatcgatg aacggttgct
      661 ggaagggccg cggcaagtgc gtggcggcgg tcaccgcctg gtcgtggaac gcgctggcca
      721 actggttctg cagcaccgcc cccaccacgg cggctccaat gacggatcca agctggcgcg
      781 tcgtgttcag gactcccgag gcggcgccgg ccattgccgg tttgatgtcg cgcatcgcga
      841 tcgtggtcat gggcgcaaag acgagcccga gcccgatgcc ggcgagcacc cagggtagaa
      901 ggaaggtgag ctgggtcgag gtcacggttg ccacgccggt cacgatggcc gagcccaatc
      961 caaagagggc aagcccggcc atcagcaagt atttcccgcc gaagcggtca gcgagccggc
     1021 cggcgaacgg cgcgacgatg ccggcggtga gcgacatcgg tgcgatcgtc aaccccgact
     1081 gcaatgcggt catgccgagg accgattggg tgtagatcgt gatcgggatg aagataccct
     1141 gcatcgcaaa cgacattgcg gcgccagtcc agttcatcag tgaaaaattc cgatcgcgga
     1201 aaaggccgag gggaacgagc ggctcagctt gtaggcgctc ccaggccagg aacgcgacga
     1261 agagcgcgat cccggcgccg atcaccatcg ggatggtgag ccagccggtg atcgtgctcc
     1321 agtcgtagcg ttgcccttcg atgaggccga aaacgacggc aaagagcgcg gcgctggaaa
     1381 gcagaacacc gatcaggtca aggcgatgct gccgggctgt gcggacgtcg gggatcacga
     1441 ggaacgtgcc caccagcgcg aggatgccga tcggaacatt gaggaagaag atccaccgcc
     1501 agtctccatt ggtgacaatc aggcctccaa gtgttggccc ggcaacggtc gacacaccga
     1561 tcaccgcgcc cgtgatgcca aaggcagcac cccggcgctc cgccgggaag atggccatga
     1621 gaatcgtcag cgtctgcgga gcgagcaggg ccgcacccac tccctggatg acgcgggccg
     1681 cgatcagttg attggcgtc
//
LOCUS       DATILV010000458         9375 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1900404, whole genome shotgun sequence.
ACCESSION   DATILV010000458 DATILV010000000
VERSION     DATILV010000458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9375)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9375)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9375
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1900404"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..3065)
                     /gene="putA"
                     /locus_tag="VLJ17_10400"
     CDS             complement(<1..3065)
                     /gene="putA"
                     /locus_tag="VLJ17_10400"
                     /EC_number="1.2.1.88"
                     /EC_number="1.5.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0003842 - 1-pyrroline-5-carboxylate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0004657 - proline dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0010133 - proline catabolic process to
                     glutamate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional proline dehydrogenase/L-glutamate
                     gamma-semialdehyde dehydrogenase PutA"
                     /protein_id="HSV23427.1"
                     /translation="MTRNDLHPSDAKIPPFRAPYAPPDEDLAAAFLRAAPLTPDAEAR
                     IDARAGALVRAIRAHADGFGGVEDFLREYSLSTREGLALMVLAEALLRVPDDTTADRL
                     IEDKLSAGDFAAHELRSGALLVSASAWALGISARVIGSHETPESILHELVIRLGRPAV
                     RTATRQAMRLLGSHFVLGQTIEEALSRSAAHPQFSYSFDMLGEGARTAADAKRYYEAY
                     ATAIAAIGKSTGAATLSRRLGISVKLSALHPRYEAVSRERIMTELTPRVIELARAAKA
                     HDLNLTIDAEEADRLELSLDIVGHALADPSLAGWSGFGLAVQAYQKRAPAVIDWAIEA
                     ARAQGRSLMVRLVKGAYWDTEIKRAQERGLADYPVFSRKAMTDLCYMTCVRKLLAARP
                     LVYPQIATHNALTVASVIEAAGGVVGYEFQRLYGMGETLYGALLRAEPDATCRVYAPV
                     GGHRDLLAYLVRRLLENGANSSFVYAAADPKVPLSAILERPQAAVGDPRHARHPKIPR
                     PCDLYAPDRNNSQGVELGHAESLAHLLLQVSDGKPADAEAMPLLNGIRIAGHVRALPS
                     PIDGAVIGMVTEADASTVRSAFAAAQAGFPAWNATPVEARAAALDRAADFVEEGRGRL
                     IALLQAEGGKTLDDAVAEVREAADLCRYYAGEARRRLVAESLPGPTGESNELRYRGRG
                     AFVCISPWNFPLAIFTGQVMAALVAGNAVIAKPAEQTPLIAAEAVRLFHRAGIALTAL
                     QLVPGDGAVGALLVAQPGAAGVAFTGSTEVARIINRTLAGMDGPIVPLIAETGGINAM
                     IVDATALPEQVTDDVIASAFRSAGQRCSALRLLCLQDDIADQVMKMVAGAARELKIGD
                     PHDPATQLGPVIDAVAKDKLDRWVDGMAAQGRVFFRGVLGDGLPSAGHYVAPAIVQLE
                     RPADLREEVFGPVLHIVRYRADALDGVIEDIVAGGYGLTLGVQSRIDATVRRVVERLA
                     VGNVYVNRNIIGAVVGTQPFGGAGLSGTGPKAGGPNYLRRFALEQVVSV"
     gene            3454..4500
                     /locus_tag="VLJ17_10405"
     CDS             3454..4500
                     /locus_tag="VLJ17_10405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003496911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV23428.1"
                     /translation="MGFFGFLRPFECRLPVTYAAAGFLVATAVNAATPQTPIKFSLDF
                     KFEGPSAPFLIAIDNGYYRDEGLNVTIDAAAGSIEPIQRVASGIYDMGFGDINSLIKF
                     RDQNPNIPIKAVFMVYNRPPFSIVTRKSRGVTAPKDLEGKKLGAPAADGAFAQWKIFA
                     QANGIDASKVAIENVGFPVREPMLAAGQVDAITGFSFSSYISLKDRGVPVDDIVVLLM
                     ADYGINLYGNAIIVNPKFATEHPDAVKGFLRAFLKGLKSTVRDPSAAVDSVIKRNDIA
                     KKDVELERLNMALRDNILTPEALAEGFGGVDAARLDKAIDQIALTYDFKAKPKGTDIF
                     DSSSLPPAADRMAD"
     gene            4543..6339
                     /locus_tag="VLJ17_10410"
     CDS             4543..6339
                     /locus_tag="VLJ17_10410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015441 - ABC-type beta-glucan transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015775 - beta-glucan transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucan ABC transporter ATP-binding protein/
                     permease"
                     /protein_id="HSV23429.1"
                     /translation="MSLWRLYARVLFLLGPETRLGLYLAIANFALAAAQFAEPVLFGR
                     IIDALAGSQAKGTPAAWSDLLVLLAAWVGFGLFTIVCGVTVALHADRLAHRRRQAVLT
                     GFFDHVLQLPLSFHYTAHSGRLMKIMLSGTDALWGLWLDFFRDSFAAGVSLAILLPLS
                     LYFNWALGGVLIAVCIVFAFLTGLVVNKTETLQRSVEGHYSNLAERASDALGNVALVQ
                     GFTRVEAEVSGLRNVADQLLAAQIPVLSWWAVVAVLTRASTTLTLLAIFLVGVYLHLD
                     GRASVGNIVMFMNFAAVLIGQLEKVVRFINKVFMDAPRLREFFTVLDTESEVRDRPEA
                     IDPGRAHGLVEFRDVTFSYDGKRPAVADLNFTALPGETVALVGGTGAGKSTALALLHR
                     AFDPQSGKVLVDGINVRDLKLAVLRHNIGVVFQEALLLNRSIADNLSIGKPDATVAEM
                     RDAAARAQALDFIDNTPDGFEAPVGERGRALSGGERQRLSIARALLKDPPILILDEAT
                     SALDAATEVKVQAALDEVMKNRTTFVIAHRLSTVRNATRILVFEDGRIIETGTFDELV
                     RIGGRFAALAKAQFMMTETKAGNLQEFQPVET"
     gene            complement(6542..7129)
                     /locus_tag="VLJ17_10415"
     CDS             complement(6542..7129)
                     /locus_tag="VLJ17_10415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018460012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HSV23430.1"
                     /translation="MDKTGFIELALSNTFNREILARLATLGLSDAWLVSGALFQTVWN
                     SLTNRPTNYGIKDYDVFYFDANTSYEAEDDAIARASTAFVDLKCVIEVRNQARVHLWY
                     AEKFGAPYAPLGRATDGIDRFLMQHAQVGIRPHGASYDVYAPHGFVDIEHLIVRPNLT
                     ENFRADWYHKKVARWKALWPELRIMEPPQVFIPNP"
     gene            7263..7613
                     /locus_tag="VLJ17_10420"
     CDS             7263..7613
                     /locus_tag="VLJ17_10420"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSV23431.1"
                     /translation="MRTGVLAAALVVASATGVFAQGAPDASFNDTQREGLRLFSQSCG
                     VCHTLVQQRTRQYGPVLSRETLGGDEDLIREYISNGTPRMPGFRYYFEPTQISSIVQY
                     IKTVAPPVSPAGAR"
     gene            7695..>9375
                     /locus_tag="VLJ17_10425"
     CDS             7695..>9375
                     /locus_tag="VLJ17_10425"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HSV23432.1"
                     /translation="MRNPRSFTTIGTVFAAAMSATALTPVTANGAEAVLSGTIKSADG
                     VALGGVTVSARADGSNIVTSVFTDETGNYYFPPLAAGNYKVWAQAITFDTGRGDVDLS
                     AAKRQDFALKPLKDFVRQLPGDMVLAALPDATPEDATMKTIVQNNCTACHTPSYILQH
                     KFDEAGWNAIINLMKHVNVYGIYQGPDHKAAQTLDYNQKKLAAYLARARGPGETSMKF
                     NLRPRPSGEAARVVFTDYEAPPDPDVGMPYKVLTNNGTDWSVGTPSVIYPGFGVHDAW
                     IDADGQSVYFTCNVPNNVLTLGKFDLKTGAFKPLKVAAANGLAAPAHGMTRTPDGTIW
                     FNVNPSKGGLGKLNTKTDKVEVFIPPEGMAPTGGATTVDYDGRGMIWVSSPTGALRFD
                     PSAEKFTEYKSPTPKSATGGNGLTYGVAADRDGNGYWAQMAIDTIGIGDGKYGTAKEL
                     KLPPVVAVRDRLSPQEIAFYDSVGAPDFSNPVPYAQGPRRMGTDKNDDVLYIGNSWAG
                     TLAKINTRTQETSTIPLPPLRKPYHVAVDSQHNAWLNIWMTDQVLRYDPKAN"
BASE COUNT         1797 a         2945 c         2871 g         1762 t
ORIGIN      
        1 ttcacgctca cgacctgctc cagggcgaag cgccggaggt aatttggccc accggccttt
       61 ggcccggtgc cggacaatcc ggccccacca aacggctgag tgccgaccac cgctccgatg
      121 atgttgcgat tgacataaac attgccgacc gccaagcgct caacaacgcg tcggaccgtt
      181 gcgtcgatcc gcgattggac gcccagcgtg agcccatagc cgccggccac gatgtcttcg
      241 atgacgccgt caagcgcgtc agcgcgatag cgcacgatat ggagcacggg accgaacact
      301 tcctcccgca ggtcagcggg acgttcgagc tgcacgatgg caggcgcgac gtagtggccg
      361 gcagacggaa gaccgtctcc caataccccg cggaagaaga cgcggccttg cgccgccatg
      421 ccgtcgaccc aacggtcgag cttatccttt gctaccgcat cgatgaccgg gcccagctgg
      481 gttgcggggt cgtgcggatc gccgatcttg agctcccgtg cggcgcccgc caccattttc
      541 atgacttgat cggcgatgtc atcctgaagg cagaggagcc gtaacgcaga gcagcgctgg
      601 ccggcggagc ggaacgcgga ggcgatcaca tcgtcggtga cttgctcggg caatgcggtt
      661 gcgtcgacga tcatggcatt gatgccgccg gtttcggcaa tcagcggcac gattgggcca
      721 tccattcctg ccaacgtccg gttgatgatc cgcgccactt ccgtggaacc cgtgaaggcc
      781 acgcccgccg cgcccggctg ggctaccagc agggctccta ctgcgccgtc gcccggaacc
      841 agttgaaggg ccgtcagagc aatgccggcc cggtgaaaca ggcgcaccgc ctcggcagcg
      901 atcagcgggg tttgctcggc aggcttggcg ataaccgcgt tgccggcgac gagcgccgcc
      961 atcacctggc cggtgaagat cgcaagcggg aaattccacg ggctgatgca gacgaacgcg
     1021 ccgcggccgc gatatcgcaa ttcattgctt tcgccagtcg ggcccggcaa tgactccgca
     1081 accaagcggc gccgggcctc ccccgcatag tagcggcaca ggtcagctgc ctcgcgcact
     1141 tcggccaccg catcgtcgag cgtcttgccg ccctccgcct gaagcagcgc aatgaggcgg
     1201 ccgcgtccct cctccacgaa atcggcggcg cggtcgagcg ctgctgcccg cgcctcgacg
     1261 ggcgttgcgt tccacgccgg aaagccggcc tgcgccgccg cgaacgcgga tcgcacggtg
     1321 gacgcgtcgg cttccgtcac cattccgatc acggcgccat cgatcggtga cggcaatgcc
     1381 cgaacatggc cagcaatcct gatgccgttg agcaggggca ttgcttcagc gtccgccggt
     1441 tttccgtcgc tcacttgcaa aagcaggtgc gcaaggctct cggcgtggcc gagctcgaca
     1501 ccctgcgagt tattccggtc cggcgcatag aggtcgcagg ggcgcggaat cttcggatga
     1561 cgcgcgtggc gcggatcgcc aacggcggct tgcgggcgct ccaggatcgc cgacagcggc
     1621 actttgggat cggccgccgc atacacaaag gaagaattgg cgccgttctc caacagccga
     1681 cgcaccagat aggcgaggag atcgcggtga ccaccgacgg gcgcgtagac gcggcaggtg
     1741 gcgtcgggct cggcgcgcaa caaggcccca tagagcgtct cgcccatgcc gtagagccgc
     1801 tggaactcat agcccacaac gccgcctgcc gcctcgatga cgctcgcgac agtcagcgca
     1861 ttgtgagtgg cgatctgcgg atagaccagc ggccgtgccg ccaacagctt gcggacgcag
     1921 gtcatgtaac acaaatcggt catcgccttg cgggaaaaca ccgggtagtc ggcgagaccg
     1981 cgctcctggg cgcgtttgat ctcggtgtcc caataagcgc cctttacaag ccgcaccatg
     2041 aggctacgac cttgcgcgcg ggcggcttcg atcgcccagt caatcaccgc cggcgcgcgc
     2101 ttctgataag cctgcaccgc cagcccaaaa ccgctccatc ccgcgagaga cgggtcggca
     2161 agcgcgtgac cgacgatatc cagggacagt tccagccggt cagcctcttc ggcatcgata
     2221 gtgagattga gatcgtgtgc cttggccgct cgcgcaagct cgatcacccg cggtgtaagc
     2281 tccgtcataa tgcgctcgcg cgaaaccgcc tcgtagcggg ggtggagggc ggaaagcttc
     2341 accgaaatgc caagccgccg cgacagcgtc gcggcgcccg tgctcttgcc gatagctgcg
     2401 atggcggttg cgtaagcttc ataataacgc ttagcgtcag cggcggtgcg ggcaccttcg
     2461 cccaacatgt cgaaagagta gctaaattgc gggtgggcgg cgctgcgcga tagggcttcc
     2521 tcgattgtct ggccgagtac gaaatgggag ccgaggaggc gcatcgcctg gcgtgttgcg
     2581 gttcgcaccg caggccgtcc caaccggatc acaagctcgt gcagaatgct ttcgggggtt
     2641 tcatggctgc cgatcacgcg cgctgaaatg ccgagtgccc aggccgatgc ggaaacgagg
     2701 agtgcgccgg aacgcaattc gtgtgcagcg aaatcgcccg ccgacagctt gtcctcgata
     2761 aggcgatccg cggttgtgtc atccggtacg cgcagcagtg cttcagctag caccatgagg
     2821 gcaaggccct ccctggtgga aagcgagtat tcccgcaaaa aatcctcaac gccaccgaaa
     2881 ccgtcggcgt gcgcccgaat cgctctgacg agagcgccgg cgcgcgcatc gatacgtgcc
     2941 tcggcgtccg gggtgagcgg tgcagccctt agaaaggcgg cagcaagatc ctcgtccggc
     3001 ggcgcatagg gggcgcgaaa gggcggaatt ttggcatcag acgggtggag atcgttgcgg
     3061 gtcattgcgc gtccgaatcc ggtggtgtgt ctctgacggt agatgtggtg tgtctctggg
     3121 ggtagatccc cgtctgcgta attccgggac gttgcgcaag cggcggcccc gaaatccgta
     3181 accccgggtc tttgggctcc gggtctttgg gttcggggct ccctcatggc gctcgggcgc
     3241 cggaacgaca gccaggaatg gaaccaccag atgctccatc tcgtatgaag tcgccctgca
     3301 caacggtgcg gacaaggcgt cgcgttgttg ttttttccga catgctctta actgcgatac
     3361 ggattgttat ggcgatgaca gttgtgggcc gctaaagatg gggatgcggc gtggcccggg
     3421 gcggtgctct actatgtgtc gggagattga tttatgggct tcttcggctt tctacgcccc
     3481 tttgaatgcc gcttgccggt aacctatgcc gcggcgggct ttttggttgc gacggccgtt
     3541 aacgccgcca ccccccagac gccgattaaa ttcagcctcg acttcaaatt cgagggccct
     3601 tcggcgccgt ttctgatcgc aatcgacaac ggctactatc gggacgaggg ccttaacgtt
     3661 accatcgatg ccgcggccgg ctcgatcgag cccatccagc gtgttgcctc gggcatatac
     3721 gacatgggct ttggcgacat caattcgctc atcaagtttc gcgaccagaa ccccaacata
     3781 ccgatcaagg cggtgtttat ggtctacaac cggccgccct tctcgatcgt cacccgcaag
     3841 agtcgcggcg tgacagcgcc caaagacctt gaaggcaaaa aacttggcgc accggccgcc
     3901 gatggggctt tcgctcaatg gaagattttt gcccaggcca acggcatcga cgcatccaag
     3961 gtcgcgatcg agaatgtggg cttcccggtc cgcgagccga tgcttgctgc cggccaggtc
     4021 gatgcgatca ccgggttctc gttttcctcc tacatctccc tgaaggatcg cggcgttccg
     4081 gtcgacgaca tcgtggtact gctgatggcc gattacggta tcaatcttta tggcaacgcc
     4141 atcattgtta atccgaaatt cgcgactgag catccggacg ccgttaaggg ctttctgcgc
     4201 gcctttctca aggggctcaa gagcacagta agggaccctt cggcagcggt cgattcggtc
     4261 attaagcgca acgacatcgc caagaaggat gtggagctag aacgtctcaa tatggccctg
     4321 cgcgacaaca tcttgacgcc cgaggccttg gccgagggct tcgggggcgt cgatgctgca
     4381 cggctcgaca aagcaatcga tcagatcgcc ctcacctacg acttcaaggc gaagccgaag
     4441 ggcaccgaca tattcgattc atcgtccctg ccgcccgcgg ccgatcggat ggcggattga
     4501 ggagcgccgc agaaggctgt cgccagtggt ggaaagatac ggatgagctt gtggcgcctt
     4561 tatgctcggg tgctattcct gctcggcccg gagactcggc tcgggcttta tctggcgatc
     4621 gccaatttcg cactggccgc ggctcagttc gccgaacccg tgttgtttgg gcgcatcatt
     4681 gacgcgcttg ccggctccca ggccaagggc acccctgcgg catggtctga tctgttggtg
     4741 ctcctcgccg cctgggtcgg ctttggactg tttaccatcg tgtgcggggt caccgtggcg
     4801 ctccatgccg accggctggc ccatcgccgc cgtcaagcgg tgttgaccgg ctttttcgat
     4861 catgtgttgc agctcccgct gagctttcat tataccgccc attcggggcg gctcatgaaa
     4921 atcatgctgt ccggcaccga tgcgctgtgg ggattgtggc tcgatttttt ccgcgattcg
     4981 ttcgcagcgg gcgtgtcgct cgccatcctg ctgccgctgt cgctctactt caattgggcg
     5041 ctcggcgggg tgctgattgc ggtatgcatc gttttcgcat tcctcacagg gctcgtggtc
     5101 aacaagaccg aaaccttgca acgctcggtc gaagggcatt attccaacct cgccgaacgc
     5161 gcgtcggacg ccctcggcaa tgtggcgcta gtgcagggct ttacccgcgt cgaggccgaa
     5221 gtctcgggcc tgcgaaacgt cgccgaccag ctgctggccg cacagattcc ggtgctctcc
     5281 tggtgggccg tggtggcggt gctcacccgc gcctcgacca cgctcacgct gctcgcgatc
     5341 tttctggtcg gcgtctattt gcatctcgac ggccgcgctt ccgtcggcaa catcgtcatg
     5401 ttcatgaatt ttgctgccgt gctgatcggc cagctcgaga aggtggtgcg tttcatcaac
     5461 aaggtgttca tggacgcgcc acggcttaga gaattcttca cggtgctcga taccgaatcg
     5521 gaggtgcgcg accgtcctga ggccattgat ccgggccgcg cccatggatt ggtggaattt
     5581 cgcgacgtca cgttttccta tgacggcaag cggccggcgg tcgccgatct caacttcact
     5641 gcgctgcccg gcgaaacggt cgcgctggtc ggcggcaccg gcgctggcaa atcgaccgcc
     5701 ctggcgctcc tgcaccgcgc cttcgatccg cagtccggca aagtcctggt ggacggcatc
     5761 aacgtccgcg acctcaaact ggccgtcctg cgccacaata tcggcgtggt gtttcaagaa
     5821 gccctgctgc tcaatcgctc gattgccgac aacctatcca tcggtaagcc ggatgccacg
     5881 gtggcggaaa tgcgcgatgc cgctgcacgt gcccaggcgc tcgatttcat cgacaatacg
     5941 ccggatggtt tcgaggcccc cgtgggggag cgcggtcgtg cgttgtccgg cggcgagcgt
     6001 cagcgcctgt cgatcgctcg tgcactgctg aaagacccgc caatcctgat tctcgacgag
     6061 gcgacgagcg cgctcgacgc cgctaccgaa gtcaaggtgc aagcggcgct cgacgaagtc
     6121 atgaagaacc gcaccacctt cgtgatcgcc catcgcctgt cgaccgtgcg caatgccacc
     6181 cgcatcctcg tgttcgagga cggccgcatc atcgagaccg gtacattcga cgaactcgtg
     6241 cgcatcggcg gccgttttgc ggcgctcgcc aaggcgcagt tcatgatgac ggaaacgaag
     6301 gccggaaatt tgcaggaatt ccagccggtg gagacctaag aggcctaacg cagactggtt
     6361 ccttcgtaac gcgcagcatg tgaacttgtc accgcgcaag ctgatcgaaa atttcaaatg
     6421 gagccagcca actttttaca acgcgctggc tcgtttgccg tccaaccgac ccaagttcaa
     6481 tccggttcgg caatacgagg aacaaagggg aaatttcgtt atgtgaatct tgcggcacgt
     6541 ctcaaggatt tggaatgaag acctgcggcg gctccatgat cctaagctcc ggccaaagcg
     6601 ctttccagcg cgcaactttt ttgtggtacc agtcagcacg aaagttctcc gtgagattgg
     6661 gtcgcacaat caagtgttcg atatccacaa aaccgtgagg cgcatataca tcgtaagacg
     6721 cgccgtgcgg gcgaatgccc acctgcgcat gttgcatgag gaagcgatcg attccgtcgg
     6781 tcgcgcgccc taacggcgca tagggcgcac caaatttctc ggcataccac agatgcacac
     6841 gcgcctgatt gcgcacctcg atcacgcatt tcagatcgac aaatgcggtg ctggctcgcg
     6901 cgatggcatc atcttcggct tcatacgagg tattggcgtc aaaatagaag acgtcataat
     6961 ccttgatgcc gtaattggtc ggtcgattgg taaggctgtt ccagacggtt tgaaacaggg
     7021 cgccggagac aagccaagca tcggaaagtc caagcgtcgc aagccgcgcg aggatttcac
     7081 ggttgaacgt gttgcttaag gccaactcaa tgaagccggt tttgtccacg tcggcgtgcc
     7141 ctgcttacgg aacacaattt ccagtgttag cagcgccacg cccccctcga cgccgccgcc
     7201 gcaaggagta agatggaaca aaacacgctc gtgagaaagc tcaagattgg gaggattggc
     7261 caatgcgaac aggggttttg gctgcggcgt tggtagttgc ttcggcgacc ggagttttcg
     7321 ctcaaggcgc acctgatgcg tcgttcaacg acacccagcg ggaagggctg cgcctgttca
     7381 gccaatcctg cggagtttgc catacgctcg tccagcagcg aacccggcaa tacgggccgg
     7441 tattgtcgcg cgagaccctg ggtggcgatg aagatctgat ccgcgaatac attagcaacg
     7501 gcacgccgcg catgccgggc ttccgctact atttcgagcc cacccagatc agctccatcg
     7561 tccagtatat caagaccgtg gccccgccag tctcgccagc tggcgcgcga tagggcccta
     7621 aggccgtccg cacccaagtc acttacgtgc tctatcacat atccgtgcca cccggttagt
     7681 caggagatcg agtcatgagg aatccgcgaa gtttcaccac gatcggcacc gtattcgccg
     7741 ccgctatgtc agcgacggct ttgacgccgg tgacggccaa tggggctgag gccgtgttga
     7801 gcggcaccat caaatccgct gacggcgttg ccttgggcgg ggtcacggtt tcggcccgtg
     7861 ccgacggctc caacatcgtc acttcggtct ttaccgacga gacaggcaac tactatttcc
     7921 cgccgctcgc cgccggcaat tacaaggtgt gggcgcaggc gatcaccttc gatacaggcc
     7981 gcggcgatgt cgatctgtct gccgccaagc gacaggactt cgcgctcaag ccgctgaagg
     8041 atttcgtgcg ccagttgccg ggcgatatgg tgctggcggc gcttcccgat gcgacaccgg
     8101 aagacgccac catgaagacg atcgtgcaga acaactgcac cgcttgtcac acgccgagct
     8161 acatcctgca gcacaagttc gacgaggccg gctggaacgc catcatcaac ctgatgaaac
     8221 atgtcaacgt ctacggcatc tatcagggac ccgaccacaa ggcggctcag acgctcgact
     8281 acaatcaaaa gaaactcgcc gcgtatctgg cgcgggcgcg ggggcccggc gagacatcaa
     8341 tgaagttcaa tctgcgccca cgcccgagcg gcgaggcagc gcgagtggtg ttcacggatt
     8401 acgaggcacc gccggatccg gatgtaggca tgccctacaa ggtgctgacc aacaacggta
     8461 ccgactggtc ggtcggcacc ccgtcggtga tctatccggg cttcggcgtt cacgacgcct
     8521 ggatcgatgc cgacggccag agcgtctact tcacctgcaa cgtgcccaac aatgtcctga
     8581 cccttggcaa gttcgacctc aagaccggcg cattcaagcc cctgaaggtc gcagccgcca
     8641 acggccttgc ggccccggcg cacggcatga cccggacgcc ggatggcact atctggttca
     8701 acgtcaaccc cagcaagggt ggcctcggca aactcaatac caagaccgac aaggtcgagg
     8761 tgttcattcc gccggaaggc atggcgccga ccggcggcgc caccacggtc gactatgacg
     8821 gccgtggcat gatttgggtg tcgtcgccga ctggcgcgct gcggttcgac ccgtcggccg
     8881 agaagtttac tgagtacaag tcgccgacgc cgaaatcggc gaccggcggc aatgggctca
     8941 catatggggt tgcggcggat cgcgacggca acggctactg ggcccagatg gcgatcgaca
     9001 ccatcggcat cggcgacggt aaatacggca cggccaagga gctgaagttg ccgccagtcg
     9061 tggcggtgcg cgaccggctg tcgccgcaag agatcgcgtt ctacgacagc gtcggcgcgc
     9121 cggacttctc aaacccggtg ccctacgccc aaggaccacg ccgcatgggc actgacaaaa
     9181 acgacgacgt gctctacatc ggcaattcgt gggctggtac gctcgccaag atcaacacgc
     9241 gtacgcagga gaccagcacc atcccgttgc ctccgctgcg caagccgtat cacgtggcgg
     9301 tcgactccca acacaacgcc tggctcaata tctggatgac cgaccaggtg ctgcgctacg
     9361 atcccaaggc taaca
//
LOCUS       DATILV010000459         4862 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_363897, whole genome shotgun sequence.
ACCESSION   DATILV010000459 DATILV010000000
VERSION     DATILV010000459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4862
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_363897"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            16..153
                     /locus_tag="VLJ17_10430"
                     /pseudo
     CDS             16..153
                     /locus_tag="VLJ17_10430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013844112.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="protoheme IX farnesyltransferase"
     gene            complement(612..732)
                     /locus_tag="VLJ17_10435"
     tRNA            complement(612..732)
                     /locus_tag="VLJ17_10435"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(653..655),aa:Arg,seq:tcg)
     gene            complement(776..2083)
                     /locus_tag="VLJ17_10440"
     CDS             complement(776..2083)
                     /locus_tag="VLJ17_10440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030253 - protein secretion by the type I
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HSV23433.1"
                     /translation="MRTRASGASRSIRRHVLAAMTVGLLVVSGLGGWATTTELSGAVV
                     ASGMLVVDSNVKKVQHPTGGVVGELRVRDGVRVSAGDVVIRLDETITRANLAIVIKGI
                     DELTARQVRLEAERDDESELQFPNELTSRMDNPDVSRVVNGERKLFHLRRSARAGQKA
                     QLKERIGQLKEEILGLAEQAEAKKGEIEWIIKELEGVRQLWSKNLVPIMRLTQLEREA
                     VRLKGERGQLIASTAQAKGKITETELQVIQIDQDLRSEVAKELREIQGKMAELVERKV
                     TAEDQLMRTEIRAPQSGVVHQLSVHTVGGVIVASEPAMLIVPESDDLTVEVKLPPQNI
                     DQLMVGQPAVLRFSAFNQRTTPEINGSVVRISGDIILDQKSGATYYLVHIATPVEEIA
                     RLEGLKLVPGMPVEAFIQTEARTVLSYLIKPLHDQILKAFRER"
     gene            complement(2080..3780)
                     /locus_tag="VLJ17_10445"
     CDS             complement(2080..3780)
                     /locus_tag="VLJ17_10445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I secretion system permease/ATPase"
                     /protein_id="HSV23434.1"
                     /translation="MSACKGAFAAVGILTGLINVLMLTGSFFMLQVYDRVLPSRSVPT
                     LVALGGLAAALYAFQGFLDMSRGRILVRIASFVDEKLSGRIYDAVAKLPLKTQGKADG
                     IQPVRDLDQIRGFMSGAGPNALFDMPWMPLYLGICFAFHYWIGITALVGAIVLVSLTL
                     WTEALTRAPAKAAAEANAGRLGLAETTRRNAEVLQAMGMRGRLAAAWRNTNAKYLASS
                     QRAADVAGGIGSASRVLRMLLQSIVLGVGAYLSINQEATAGIIIASSILVSRALAPVE
                     LAIANWKGFVAARLSRRRLSDLLHLMNQQGPMMALPPPGRNLSVEALSISPPGQQRIT
                     MHDASFTLQSGQGLGIIGPSAAGKSSLARGIVGVWAPTRGNVRLDGAALEQWSSEALG
                     PHIGYLPQDVELFDGTVAENIARFTPDPDPASIVAAAQAAGVHDLIVRLPDGYETRIG
                     ENGIAISAGQRQRIALARALYGDPFLVVLDEPNSNLDAEGDEALTQAILGARKRGAIV
                     IVIAHRPSALLGVDLILAIANGRVQTFGPKEEVLQKVLERARPHLRPVKFASEGEVKP
                     "
     gene            complement(4044..>4862)
                     /locus_tag="VLJ17_10450"
     CDS             complement(4044..>4862)
                     /locus_tag="VLJ17_10450"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HSV23435.1"
                     /translation="NGTSITNFAGGTVTNVESITANLLGGTDTLNFGASTADVTVNLS
                     AGTASGFTSIAGIENATGGAGNDTLTGDTGANVLTGGAGNDTLAGGLGNDTLAGGVGN
                     DTASYAGEIDAMFVDLVAGTARRGSAAAAVEDTLSSIENVTGGSGNDTITGSAVANVL
                     TGGAGNDSIVAGAGNDIITGGLGNDTMNGGAGADSFVFDVNFGKDTITVFGDTGTDQD
                     ILDFSLALFANFAAVQSHSAQVGADLHIDFDLANGVVLTNYALANLGADDLRFH"
BASE COUNT          919 a         1520 c         1420 g         1003 t
ORIGIN      
        1 aatcaggttg cgggcattgg tgaacgccaa gtcgtggcgc ccgcgggcct tcgctccaac
       61 ctggttcgag cccgcgacta tctggcgctg atgaagccgc gggtgatgtc gttcgtggta
      121 ttcacggcgg tggtggggct cttgagcgcg cccgaccccg ttcagcccac gagttgcgca
      181 gcttgaatct cctgcgcatt caggaaggcg cggtccggtt acccgagcac ggcgaggttt
      241 tgatggaggt cacggccatc ggccgccgtt ttgttgagcg cttcatcgaa ggaaacatgt
      301 aaacgctcca cgctgtcgcc gtccgatccc ggggccggcc acgctcacgc caatgagccg
      361 tcgccgacgc gcggtccggc taaaccgaac ctcgcgctgg ccaaaagcac cagatttcgg
      421 gttcgattgt agatggattt gtggacagtg gacgcgtcaa tttcataagc cattgatcga
      481 tttatccatt tcggagctgg ataggcggac actccctcga caaaaccgtc ttggattaac
      541 cattgttggc tagttgttgg ctataccttc gtctggctcc ggtttatcgg ccataagtaa
      601 ttgaaaatcg ttggcgcgct cggagagatt cgaactcccg cccccccaga ttcgaagtct
      661 atgtcatgtc gttgattctt ctcaggcctg ttggaaactg ctgattccgc caacttcaag
      721 ccgacgttgc gcaaagcatc gctagcgcga attccgtgct aggggaacca cacgatcatc
      781 tctctcgaaa cgccttcaat atctggtcgt gaagcggctt gataagatag gacaacacgg
      841 ttcgagcttc tgtttggatg aacgcctcta caggcattcc gggcacaagc ttgagccctt
      901 ccaagcgtgc aatttcctcc acaggtgtgg cgatgtggac gagatagtaa gtcgcgccac
      961 tcttttgatc caggatgata tcgccggaga tcctgaccac gctcccgttg atctccggag
     1021 tcgtccgctg gttaaatgca gagaaacgaa gcactgcagg ctggccaacc attagttgat
     1081 cgatattttg cggcggcagc ttgacctcga cagtaagatc gtccgactcc ggtacgatca
     1141 gcatcgcggg ttcgcttgcg acgatcacgc cgccgacggt atgcacactc agctggtgca
     1201 ccacaccgct ctggggcgcg cgaatttcgg tgcgcatgag ctggtcttcg gcggtgacct
     1261 tgcgctccac caactcagcc atcttgccct gaatttcgcg tagttccttc gcgacttcgc
     1321 ttctcagatc ctgatcgatc tgaatgacct gtagttctgt ctccgttatc ttgcccttgg
     1381 cctgcgccgt agacgctatg agttgccccc gttctccctt aagccgcacc gcttcgcgtt
     1441 cgagctgcgt gaggcgcatg atcggaacga ggttcttcga ccacaactgt cgaactccct
     1501 cgagctcttt gatgatccac tctatctcac cttttttggc ctccgcctgc tccgcgagac
     1561 ctaggatttc ctccttgagt tggccgatcc gttctttcag ctgcgccttt tggccggccc
     1621 gtgcggacct gcgtagatga aacagcttcc gctcgccgtt aacgacgcgg ctgacgtcag
     1681 gattatccat acgggatgtc aattcgtttg ggaattgcag ctcgctttcg tcgtcccgtt
     1741 cagcttccag gcggacttgg cgtgccgtca attcgtcaat gcctttgatg acgatcgcga
     1801 ggttcgcgcg cgtaatcgtc tcgtcgaggc gaatgaccac atcgccggca ctcacccgca
     1861 ccccgtcccg cacgcgaagc tcgccgacca ccccgccggt cgggtgctgc acctttttga
     1921 catttgaatc aacgacaagc atgccggacg ccacgacggc accggacagt tcggttgtcg
     1981 tggcccagcc cccaaggccg cttacgacaa ggagccccac agtcatcgcc gccaaaacat
     2041 ggcgacgaat cgaacggctc gcgccgctgg ctctcgttct catggcttca cctcgccttc
     2101 agacgcgaac tttaccggac gcaaatgggg ccttgcgcgc tcgagcacct tttggagtac
     2161 ctcttccttc ggtccgaacg tttgtacgcg accattcgcg attgccagaa tcaagtcgac
     2221 gcccaacagg gccgatggac gatgggcaat gacgatcacg atggctccac gtttgcgtgc
     2281 cccaagaatc gcctgcgtta gcgcttcgtc gccttcggcg tcgaggttgg aattcggttc
     2341 atcgagcacg acgagaaacg gatctccata gagcgcgcgc gccaacgcaa tgcgctggcg
     2401 ctggccagcc gagatcgcta taccattttc gccgatgcgc gtttcgtagc cgtccgggag
     2461 gcgcacgata agatcgtgca cgccggccgc ctgggcggct gcaacgatgc ttgccggatc
     2521 cggatcaggc gtgaaacgag caatgttttc agccaccgtg ccgtcgaata gctccacgtc
     2581 ttggggcaag tatccgatat gtggccctaa agcctccgat gaccactgtt cgagtgccgc
     2641 cccgtccaga cggacgttgc cacgcgtagg agcccacacg ccgacgatgc cgcgtgccag
     2701 cgacgatttt cccgccgcgc ttggcccgat aattccgagc ccctgtccgc tctgcagcgt
     2761 gaaactggca tcatgcatcg tgatcctttg ctgccccggt ggcgaaatgc tgagagcctc
     2821 aacagaaagg ttccggcccg gcggcggcaa cgccatcata ggcccttgtt ggttcatgag
     2881 atggagcagg tcggacagcc gtcgccggct taggcgggct gccacgaaac ccttccagtt
     2941 cgcgatcgcc agctcgaccg gggcaagcgc ccgtgagacg aggattgagc tggcgataat
     3001 gatgccggcc gtcgcttcct ggttgatcga cagataggcg ccgactccga ggactatcga
     3061 ttgcagcagc atgcgcaaca cgcgagaggc cgagccaatg ccccctgcga catcggcggc
     3121 gcgctgtgag gatgccaggt atttcgcgtt ggtatttctc catgccgcgg caagccggcc
     3181 tcgcatgccc atggcttgga gcacctcggc attgcgacgt gtcgtttccg ccaagcccag
     3241 acggccggcg ttcgcctcgg cggcggcctt ggccggagcg cgcgtcaagg cctccgtcca
     3301 caacgtcagg ctgaccagga cgattgcgcc caccaatgcc gtgatgccaa tccaatagtg
     3361 gaatgcgaag cagattccaa gataaagcgg catccacggc atgtcgaaca aagcgttcgg
     3421 cccggccccg gacataaaac cacggatctg atcgaggtcg cgcaccggtt ggatgccatc
     3481 tgccttgccc tgggtcttga gcggtagctt cgccacggcg tcgtagatac gtccgcttaa
     3541 cttctcatcg acgaaacttg cgatgcggac gagaatgcgc ccgcgggaca tgtcgaggaa
     3601 gccttgaaac gcatagagtg cggccgccag accgcccaac gcgaccaaag tcggtacgct
     3661 gcggctcggc aacacacggt cataaacctg taacatgaaa aatgagccgg tcagcatcaa
     3721 cacattgatg aggccggtca ggatccccac agccgcgaaa gcgcctttgc acgcagacaa
     3781 gccgatcgcg atcggcgacg gcggggactt cgaagtgtta cgatccgagg cgcgcacgac
     3841 tcaaatttcc ccacaatgac aaagcggcaa tcgctcgcct caggttggtg agcacgaccg
     3901 tggggctgtc cgaagtcgac ttcgttcgct ttgccctccc catcaggtaa aactccgaca
     3961 cgctctgttg gcagttcctg ggcgcgcgta agagagcccc ctacttcacg cgcgcccaga
     4021 gtacgaccga ctttcccgcg acctcagtgg aagcggaggt cgtccgcacc caggttggcg
     4081 agcgcgtagt tcgtcaacac gacgccgttc gcgagatcga agtcgatgtg caggtcggcg
     4141 cccacttggg cactatgact ctggaccgcc gcaaagttgg cgaacagtgc aagcgagaag
     4201 tcgaggatat cctgatcggt cccggtgtcg ccgaacaccg tgatcgtgtc tttgccaaag
     4261 ttcacgtcga acacgaagct gtcggcaccg gcgccgccgt tcatggtgtc attgccgagg
     4321 ccgccggtga taatgtcgtt gccggcgccg gctacgatgc tgtcgttgcc cgcgccgccg
     4381 gtcagaacgt tggcgaccgc cgagccggtg atggtatcgt tgccgctacc gccggtgacg
     4441 ttttcgatcg acgacagcgt atcttcgacg gcggcggccg cactcccgcg ccgtgccgtt
     4501 ccggcgacga ggtcaacgaa catggcgtcg atttcgccgg cataggacgc ggtatcgttg
     4561 ccgacgccgc cggccagggt gtcgttaccc aggccgccgg cgagcgtatc gttacccgcc
     4621 ccgccagtga gcacgttggc gccggtatcg ccggtcaacg tgtcattgcc ggcgccgccg
     4681 gtggcattct cgataccggc gatcgacgtg aagccggagg ccgttccggc ggacagattc
     4741 accgtgacgt ctgcggtcga cgcgccgaag ttcaacgtat cggtgccgcc gagcagattg
     4801 gcggtgatgg attcgacgtt cgttaccgtc ccgccagcga agttagtgat cgacgttccg
     4861 tt
//
LOCUS       DATILV010000460         2046 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_879610, whole genome shotgun sequence.
ACCESSION   DATILV010000460 DATILV010000000
VERSION     DATILV010000460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2046
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_879610"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..425
                     /locus_tag="VLJ17_10455"
     CDS             <1..425
                     /locus_tag="VLJ17_10455"
                     /EC_number="1.20.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013948686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030612 - arsenate reductase (thioredoxin)
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="arsenate reductase ArsC"
                     /protein_id="HSV23436.1"
                     /translation="HAYSAGSQPKGQVHPETIRLLQSLDYDTSGLRSKSWAEFAKPGA
                     PALDFVFTVCDNAAGETCPLWPGQPMTAHWGIPDPAAAEGSPAEVALAFKEAYRQLSQ
                     RIGIFTALPLRSLDKLSLQAKLKEIGRNGSTAKIKETN"
     gene            425..1087
                     /locus_tag="VLJ17_10460"
     CDS             425..1087
                     /locus_tag="VLJ17_10460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MIP/aquaporin family protein"
                     /protein_id="HSV23437.1"
                     /translation="MPPLAQRVFSEFLGTALLLAAVVGSGIMAQKLSGGNDALALLCN
                     TLPTGAMLTVVILIFGPISGAHFNPAVSLAFALRGELPWRIAPLYIAVQMLGGIAGVW
                     AAHLMFELPVWQISTTVRSGPGQWLAEAVATFGLLLTIFGCLTRSPQAVPYAVGLYIT
                     SAYWFTASTSFANPAVTIARSISNTFAGIAPSATPGFILAQLAGMLLAVMLSRWLWPA
                     TT"
     gene            1391..1549
                     /locus_tag="VLJ17_10465"
     CDS             1391..1549
                     /locus_tag="VLJ17_10465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23438.1"
                     /translation="MNDMTIGIDQTEEEVLTYQVSDEALETAAGMGKEKAGNYTLGFC
                     TGLAACPG"
     gene            complement(1698..1949)
                     /locus_tag="VLJ17_10470"
     CDS             complement(1698..1949)
                     /locus_tag="VLJ17_10470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23439.1"
                     /translation="MSWKTDLKLTDLEASTAIEIECKRCGLSRYQTPAQIMAQFDCRH
                     AYLDEVEYSLHCANRFCRGGVRIALIHDDKNEGFVGGMA"
BASE COUNT          397 a          634 c          600 g          415 t
ORIGIN      
        1 tccacgctta cagcgccggc agccagccca aaggacaagt gcatccggaa acgatccggc
       61 tgttgcagag tctcgactac gacacatcgg gtttgcggtc gaaatcctgg gcggaattcg
      121 ccaagcccgg cgcccctgcc ctcgatttcg ttttcacggt ttgcgacaac gcggcgggcg
      181 aaacctgccc gctatggccc gggcaaccga tgaccgcgca ctggggaatt cccgatccgg
      241 ccgcggccga aggttctccg gccgaggtcg cgctggcgtt caaggaggcc tatcggcagc
      301 tgtcgcagcg catcggaatt ttcacggcgc tgccgctccg ttcgctcgac aagctcagct
      361 tgcaagcgaa gctcaaggaa atcggccgca acggctcgac ggcaaaaata aaagaaacga
      421 attgatgccg ccgctcgcgc aacgcgtatt ttccgaattc ctgggcaccg cgcttctgct
      481 cgccgccgtc gtcggctcgg ggatcatggc gcaaaagctc tcaggcggta atgacgcgct
      541 cgcgctgctg tgcaacacgc tgccgaccgg cgccatgctc accgtcgtca tcttgatttt
      601 cggacctatc tcgggcgcgc atttcaatcc ggccgtgagc ctggctttcg ccctacgagg
      661 cgagttgccg tggcggatcg cgccgctcta tatcgccgtg caaatgctgg gcggcattgc
      721 cggcgtctgg gccgcacatc tgatgttcga gttaccggtc tggcaaatct cgaccacggt
      781 tcgatcgggg ccgggtcaat ggttggccga ggctgtcgcc acgttcggat tgctgctgac
      841 gattttcggc tgcctgacac gctcaccgca agcggtgccc tatgccgtcg gtctctacat
      901 cacatcggct tattggttca cggcatccac gtcatttgca aacccggccg tgactattgc
      961 tcgatcgatt tccaacacct tcgccggcat tgctccctct gcgacgccgg gctttatcct
     1021 tgcccagctt gcggggatgt tactcgccgt aatgctcagt cgatggcttt ggccggctac
     1081 cacctgagcg accgcgccgg cgagcggctg ctgacccagc cgccgccgtg agaggcatgt
     1141 aacaggcttg aagcgggaat taagtcaccg attgggcgac cggctgcacc caacgatgtc
     1201 cgcttccgag ggatgagcga cataccgcgc aagtatcgct gtcgctcgca gagcgcggag
     1261 gcccggctta accgcgataa taaatcgcaa attctgtgac ccccatcaca gccggcacgc
     1321 gcgcgctgtc ctaagttgca agcatcagat ttaaggatct gagttatccg tgaacaaaag
     1381 gatcaatgcc atgaacgaca tgactatcgg aatcgaccag accgaagagg aagtcctcac
     1441 ctatcaagtc tccgacgaag cgctggagac tgcggcggga atggggaagg aaaaagcagg
     1501 gaactacaca ctcgggttct gcaccggtct ggctgcttgc ccgggctgat cggcttattg
     1561 gactgatcct ggcttcttaa aattcatacc gagctgtcga ttgccgaggt ttccggcgaa
     1621 gtgccggagg cctcggcgat ggcaatgagc aattttattg ggtctgcgtc atatctgctc
     1681 ctggcacaaa gcgggcatca cgccatgccg ccgacaaatc cctcattctt gtcgtcatgg
     1741 atgagcgcga tacgcacgcc gccccggcag aaacggttcg cgcaatgcag gctgtattcg
     1801 acctcgtcca gataggcgtg ccggcaatcg aattgcgcca tgatctgcgc cggcgtctgg
     1861 tagcgcgata gcccgcagcg cttgcattcg atttcgatcg ccgttgaggc ttccagatcg
     1921 gtcaatttca aatcggtttt ccagctcacc agaaatcctc cgcgcgcgga atccgggtgt
     1981 agctgatctt gccaccagca tagccgccgg gcgggggcac ccaagggccg atgctgacga
     2041 gcgtgc
//
LOCUS       DATILV010000461         1857 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3687518, whole genome shotgun sequence.
ACCESSION   DATILV010000461 DATILV010000000
VERSION     DATILV010000461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1857)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1857)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1857
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3687518"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..216
                     /locus_tag="VLJ17_10475"
     CDS             <1..216
                     /locus_tag="VLJ17_10475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23440.1"
                     /translation="SEITHIGAGYKQNVTGFGWTNGVFLELLQMLPPGLVVQLTARQN
                     LNKNGPHMKIPPRTGTVIRREDRSREQ"
     gene            206..1597
                     /locus_tag="VLJ17_10480"
     CDS             206..1597
                     /locus_tag="VLJ17_10480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar porter family MFS transporter"
                     /protein_id="HSV23441.1"
                     /translation="MSSETPLQQGVVHSQSTGRAFVYIAATFAALGGLLFGYDTGVIS
                     GAELFLKNDFTLSTFALEVIVSGVLAGAAVGALLGGRLADLFGRRKLLIVTAIIFGVG
                     GIVCAIATSPAILVIGRIIVGLGIGLASGTVPVYISEVSPADARGWQVSLFQLAITVG
                     ILLAYIVDYAFASIQGWRWMFGLAVVPAAIFGMGMLFLPESPRWLARRGHHEKARAML
                     TRIRGTSDVSAELQEIERSLAHADERGRLSDLFAPSVRPALVVGIGLAIFQQVTGINT
                     VIYYAPLIIQSAGISSESGAILATAGIGLVNVLMTIVAMWLIDRVGRRPLLLVGTAGM
                     VATLGLLGLAFHTSGKSGELVWLAVISMMVYVASFAISLGPIFWLLIAEIYPLKIRSS
                     SEGLAAAFNWGSNLLVSLTFLTLLEMIGSARTFWLYGLFAIAAWIFSYFRVPETKGRT
                     LEEIEEFWRARRK"
BASE COUNT          354 a          534 c          541 g          428 t
ORIGIN      
        1 tccgagataa cccacattgg agccggatac aagcaaaacg taaccgggtt cgggtggaca
       61 aacggcgtct tcctggagtt gttgcaaatg ttgccgcctg gcttagtcgt ccagctcact
      121 gcccggcaaa atctgaataa aaacggtcca catatgaaga taccgccgcg aacagggacc
      181 gtgattcgca gagaggaccg aagccgtgag cagtgaaact cctttgcagc agggcgtagt
      241 tcattcgcag tcaaccggcc gagccttcgt ctatatcgcg gccacctttg ccgcgctagg
      301 cggtctgctt ttcgggtacg acaccggagt gatttccggc gccgagttat tcctgaagaa
      361 tgacttcaca ctctccacct tcgccctcga ggtgatcgtg agcggcgtac tggccggcgc
      421 ggcagttggc gccctgctgg gcggacgctt ggcggatcta tttggtcggc gaaaattgct
      481 gatcgtcacc gccattattt tcggcgtcgg aggaattgtc tgtgccatag cgacatcccc
      541 cgcgatcctg gtcatcggcc ggatcattgt gggcttggga attggactcg cctcgggaac
      601 ggtcccggtc tacatctctg aagtttcgcc tgcagacgcg cgcggctggc aggtctccct
      661 tttccaacta gccatcaccg tcggcatcct tctcgcctat atcgtcgatt acgcctttgc
      721 gtcgatccaa ggatggcgtt ggatgtttgg cctggccgtt gtgcccgccg cgattttcgg
      781 tatggggatg ctgttcctgc cggaaagccc gcgctggctc gccagacgcg ggcaccacga
      841 aaaggcccgc gcgatgctga cacgtatccg tgggacgtcg gacgtaagcg cagaactgca
      901 agaaatcgaa cgcagcctgg cgcatgccga tgaacgcggg cgattgtctg atctgttcgc
      961 tccgtccgtt cgaccggcgt tggtggtcgg cattggactt gcgatcttcc aacaagttac
     1021 cggcatcaat acggtcatct actacgcgcc gctgatcatt caatctgcgg gcatctcgtc
     1081 cgaatcaggc gcgatcctgg cgactgccgg catcggcctg gtaaacgtgc tgatgaccat
     1141 cgtcgccatg tggctgattg atcgcgtggg acggcgaccg ctgctgcttg tcggcactgc
     1201 cgggatggtg gccactttgg gtttattggg tttggcgttc cacacgtctg gaaaatcagg
     1261 cgagctcgtt tggctcgcag tgatcagtat gatggtatat gtcgcgtcgt tcgcgataag
     1321 cctgggacca attttttggc tgctaatcgc tgaaatctat ccattgaaga ttcgcagctc
     1381 gagcgagggc cttgctgccg cattcaattg gggttcgaac ctgctggtct ctctgacgtt
     1441 cctgacgctc ctagaaatga taggttccgc gcgcaccttc tggttatatg ggctcttcgc
     1501 catcgcggct tggattttct cctacttccg cgtgccggag accaaggggc gcacgctcga
     1561 agagattgag gaattttggc gagcgcgacg caaatagcaa tgggacggcc caatatgcca
     1621 gttgaagaca gcgcacggct gctcagtgac agccccatcg aatggattaa ccgagggctc
     1681 caacccggcc tcggctgctg cgatggctgc acgacccgaa tctgaatctc gcttcagcct
     1741 caccgtcacc cttcgcttag gtccatgcca ttgagcggcg tcgcaaaact atcccaacac
     1801 gatacgaacg ttgtgaactg agccgtcgtc ggcgagccga atatttgcag atcctgc
//
LOCUS       DATILV010000462         4778 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2411785, whole genome shotgun sequence.
ACCESSION   DATILV010000462 DATILV010000000
VERSION     DATILV010000462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4778)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4778)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4778
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2411785"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1136..1699
                     /locus_tag="VLJ17_10485"
     CDS             1136..1699
                     /locus_tag="VLJ17_10485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23442.1"
                     /translation="MTKGAADVVAILRVMEGIYAPAPFQLRRPSRVVYGHCFDRALYR
                     GFERRLTPGIEWGEKRGRHAIAAFERDAWDIALSHCLERSADAGTTISNLFDFDRARR
                     FHLPAERAPNILDCGNCAIDLSLRCVVGESIADFDMVEPIMVPPALGPLLPSWPLDAA
                     HGLFPYARLAVGFDAWPARFASTCAST"
     gene            complement(1765..2244)
                     /locus_tag="VLJ17_10490"
     CDS             complement(1765..2244)
                     /locus_tag="VLJ17_10490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23443.1"
                     /translation="MLAGIDLVTSEVHALRLTYQPDPFYHRGVYKTAHSARQVGRKLD
                     LGIQASGNVGLSRSSAMSRPCLSLAVAALAASLTCGVAVSQSTAPAPNPALETQASSE
                     PSIAAKAENWTTKQWNAAKQKWSQDKAKWNACNQDTKDRRLSGRKSWSHLYDRMTKA"
     gene            complement(3024..3326)
                     /locus_tag="VLJ17_10495"
     CDS             complement(3024..3326)
                     /locus_tag="VLJ17_10495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23444.1"
                     /translation="MKDRGIGYARKQLMDKSTALHPRRHRNTAKQKGNRAMTLNLQRT
                     TSELAKKIAALPARYPYVGAAQKNVYLFTPTEAERDLIVQALQAFPAASPPKGSAR"
     gene            complement(3562..3951)
                     /locus_tag="VLJ17_10500"
     CDS             complement(3562..3951)
                     /locus_tag="VLJ17_10500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23445.1"
                     /translation="MELPAMLNGESLKRLALGAFVGFLATVVIGFNWGGWTLGSTAED
                     NATRRVNIALVQVYAPVCVERFEHQANIEVKWIELSKIDSWRRDDYIKESGFATPPGS
                     TSPNARIADACADALSKIIAMQTPATK"
     gene            4626..>4778
                     /locus_tag="VLJ17_10505"
     CDS             4626..>4778
                     /locus_tag="VLJ17_10505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HSV23446.1"
                     /translation="MTVIGYARVSANQDLTIQETALRAARCEVNRHEERSGTTTEGRE
                     ELCTVLE"
BASE COUNT          967 a         1392 c         1404 g         1015 t
ORIGIN      
        1 ttctgcggca ccttgacggc aacgcattca ttgcccgatc cgcgaaagcc acggtcgcaa
       61 ttccatcccc gaccctggta tgagaatgag tctgttaaat atccgttttt gggtacgatc
      121 accgaaatac agcctgctcc agtctttcga tagccccgct caccaacgcg gcaagtatga
      181 tcggaatcac aatcggtggc acgaaccagg atgccaagcg aagtttgaga gaatcacgct
      241 gcaggactga agcgacgctc atgactttca ccttggaaga agaggatgcg cgccgcaagc
      301 agcgggcaaa cgctcagaac atggatgcca atcggcatcc ggacacgaat gtctattttt
      361 aggttgtctt attgtgtcaa ccaacgacac tgccactacc gcagccactg cagggatcgg
      421 agacttcggt atgtttggcg gctctgaggc aagccacaac ttacttgcgt caactgtagt
      481 tggcgtgtcg ggcgccaaag cgcaagagcg gaccgagaaa ttaggcgccg aattatttac
      541 ttgtcgtctg agcatttcct cgacgagcat tgccaacagc gagtttcgcc aaattgcctg
      601 ggtcggtgcg gcatcagcaa cgctgatgcc gctggtcgag gagatccgcg tgcggcggca
      661 acttcgaccc gcagcagttc gatatcgaca aaatcaatcg ccgcctcgcc tcggctgcgc
      721 cccgcaagag tacccgccgc aagaccgcaa agccggctgc acgctgaatg agattggccg
      781 gtggtcttca ccggacgcgt acgcggccgg cgccctaaac cggggactac ttcaatacga
      841 gtggttccgc acgcatgcga gcggcccttc gcgccaacgt tcaccgagga tgagatcgac
      901 cgcgtagacg acgaagacag gcaaaggctg gggcggtgcc gtgcatggcc aggtgaccga
      961 gcgcatcgat tccataatga accgcgccaa ggattcccgg agcaccggcc tcattgtgcc
     1021 atctggtaat cgcctcaaaa tcgatatctt ggtcgcgtct tacggtttta ttggtcatgg
     1081 ggcgggtcaa cactaattgc gagtcaaatc gatgaagccc acgtgagcct ttgcgatgac
     1141 caaaggcgcc gccgacgtgg tggcgatcct acgggtcatg gagggaatct atgcgccggc
     1201 gccattccag ctccgtcgcc caagccgcgt cgtctatggg cattgctttg atcgcgcgct
     1261 gtaccgcggc ttcgagcgcc gcctcacgcc gggcatcgaa tggggcgaga agcgcgggcg
     1321 gcacgccata gcggcattcg agcgggacgc ctgggatatc gccctctcgc attgccttga
     1381 acgctctgcc gacgccggca cgacgatatc gaatctcttc gatttcgatc gagctcgccg
     1441 atttcatctg ccggccgagc gcgcgccaaa catccttgat tgcggcaatt gcgccatcga
     1501 tctcagcctg cgttgcgtag tcggcgagtc gattgctgac ttcgatatgg tcgaaccaat
     1561 tatggtcccg cctgcgctcg gcccactctt gccgtcctgg ccattggatg ccgctcatgg
     1621 cttgtttccc tacgcgcgct tggcagtcgg ctttgacgca tggccggcgc ggttcgcctc
     1681 gacctgcgcg tcaacatgag cgactctcgg cgtgctcggc gagtcaaccc accccgccac
     1741 gcccgaggtc ccgccagggc cggatcaggc tttggtcatg cggtcgtaga gatgcgacca
     1801 gctcttgcgt cccgagagcc tccggtcttt ggtgtcctgg ttgcaggcgt tccatttcgc
     1861 cttgtcctgg gaccatttct gtttcgccgc gttccactgc ttcgtggtcc agttttccgc
     1921 cttggctgcg atggaaggtt ctgatgaggc ctgggtttcc aacgccgggt tcggcgcagg
     1981 cgcggtggat tgcgaaaccg ccacaccgca ggtcaggctc gccgccaatg ccgcaacggc
     2041 aagagaaaga caaggtcgag acatggccga gctccttgat aagccaacat ttccactggc
     2101 ttgaatgccg agatcgagct tacgaccgac ctggcgggcc gaatgtgcag ttttgtacac
     2161 accgcgatga tagaaggggt cgggctgata ggtgagcctc agggcatgga cctcgctcgt
     2221 gacgaggtcg atgccggcca gcaagctgac tgtcctatgg cgcttatatt catgctcgcg
     2281 tgcaagggtc gcatgtacga cgcgccggct gctgcgcctt gcaagagacg tttgagagag
     2341 tttccctgca gggttgatgg taccatgact ttcacgctga gaataggagg acgcgccgtc
     2401 gcaagcaatg cgcggacgta caaaatgcgg atgctgatcg catccgaaca cgacccctat
     2461 tttcagagtg ttattgtgcc agccgatggc gccaccgccg ccactgtagg aacggaaact
     2521 tcggtatgtc ttccccgcga ggggcgggcg ccttcgcata tcacctcccc ccaaacagtg
     2581 cggtttccgc acgtggcccg actcggaata gccgacccct ggtcgcctag gccgggtcgt
     2641 tggagcaagt gccggcgagc gaagcacaat cagggatttg atcggcccgc accggtcata
     2701 gaggtatccg tgaatctcaa aattggcgcg cagagggtgg ggctcaatct ctgcaggagc
     2761 ggtctcggcg ccgcccttga gcatgagcga cgcatcttca aaacgcatgt gctttccttt
     2821 cgcccgacgc tggttcggcg cgattaagac tttggataag catctttttg aaagttgaat
     2881 tgaaagccat ggcgctttgc tttggcgtct cgcgccgtcg tgattctccg aagtcacaat
     2941 gaggaaatct gtataaagct gcccacttga cctgactgtc cacaggttcg ttaattaaaa
     3001 tggaatccct cgccatcgcg ccctcatcgc gcactcccct tcggagggga agccgcaggg
     3061 aatgcctgca atgcttggac gatcaggtcg cgctccgctt ctgtcggcgt gaacagatag
     3121 acgttctttt gtgccgctcc gacgtaagga tagcgcgctg gcagagcggc aatctttttc
     3181 gccaactcgc ttgttgtccg ctgcaggttg agagtcatcg cgcggttccc tttttgcttg
     3241 gcggtgttcc gatgacgacg tggatgaagg gcagtcgatt tatccattaa ttgctttctc
     3301 gcatatccga tgccgcggtc tttcaaatcc ctccaccagc tgatcgggca tgacggtcga
     3361 tgactactct tagtctagtc tctgtcgcga aacgcagttg cgcgcgaact cgttctactc
     3421 ggcattgcta agctcgtaca gcctgacaaa gaggaacgac ctgggtcgcg gctgtgcggc
     3481 tgtgctccaa aacccattga aatacgaagc aaaaaaatcc ccaccagtgc ggcaggggat
     3541 acgaagggca gatgacgggc gctacttggt ggccggtgtc tgcatcgcga ttatcttgct
     3601 gagcgcgtct gcacacgcat ccgcgatccg cgcattcggc gaagtggagc cgggcggtgt
     3661 cgcgaagcca ctttccttaa tgtagtcatc gcggcgccaa gagtcgatct tgctgagctc
     3721 gatccacttt acttcgatgt ttgcctggtg ctcgaacctt tctacgcaca caggtgcata
     3781 gacttgcacc agcgcgatgt tgacgcgccg cgtggcattg tcctcggcag tgctcccgag
     3841 ggtccatccg ccccaattga agccgatgac taccgtagcg aggaagccga cgaaggctcc
     3901 tagagcaagg cgcttaagcg actcaccatt cagcattgca ggtaattcca tgtggtttcc
     3961 tttcgcccga cgtgtttcgg tgcgaggtta cagacaccca gatgggttcc ggccgataag
     4021 ttggattgaa ggcccggtcg gcttgcgacg acggctcgat caaaacaagt gtgcgcccat
     4081 cggccgaccg gagtctgtat aaaattgacc acccagcggt gggagactgg cgaggcctct
     4141 ctccgaaagg cttgaagcgc agctcccaac gccgcaagaa ctcccgagcg gtttgaggtt
     4201 tcgcgctcgg gaccgggcca catattgggc catcagttcg cgcgggtata cagcgtcagt
     4261 ggcgtaagct gagaggtgcg tcgaggtgca cacgccattg tgcgcatatg tcaatcttcc
     4321 cggctgcgta cgcgccaacg caacgagttc tgcaacattc ttcgccggca catcattgtt
     4381 gaccaagagc aaattgggaa gtccgtacat ttgcgggtcg gcggttgccg accgcgcctg
     4441 tcacactgtc gacgatgacc ggcttgccga atgcgtcggc gagcctgtct gcgaatagtc
     4501 gcgcagggat gtcgccgccg ggcggaaatc cataaatcag ccgaatgttc tttgtcggat
     4561 agttttcata tttcaagacg gcattgtctt taggtctaga acctaacgag acaagaggcc
     4621 gggacatgac cgttatcggg tacgcgcggg tcagcgctaa ccaggacctc accattcaag
     4681 agaccgcctt acgtgcggcc aggtgcgaag tcaaccgcca cgaagagcgc agcggcacaa
     4741 caacggaggg ccgggaggaa ttgtgcacgg tgcttgag
//
LOCUS       DATILV010000463         1840 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_880512, whole genome shotgun sequence.
ACCESSION   DATILV010000463 DATILV010000000
VERSION     DATILV010000463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1840)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1840)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1840
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_880512"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1840
                     /locus_tag="VLJ17_10510"
     CDS             <1..>1840
                     /locus_tag="VLJ17_10510"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HSV23447.1"
                     /translation="VMSTELIKVTINGRDFQVAKGARLIDVCRENQFDIPSFCYYADL
                     ALQASCRMCLVRIEKMPKLQTSCTVICTDGMVVTTQSEEIEKAQRSMLEFLLANHPLD
                     CPVCDRGGECELQELTFDWGNLEERFIERKNAQPEKYLSPMVANDPQRCILCKRCTRV
                     CDEWMGEQAIEAGNRGANTVIGTYGGWLNCTECGNCIEVCPTGTLLDGTYRHQARPWE
                     LNQTVSTCAYCSDGCEMSLGSRGAELMRIVARDRYVNGHNGEFLCVKGRFGHPFVNHE
                     ERLRMPMIRYKKGGKLIPATWDEAIRLTAAKLSEIAEASGGDSIGVIGSPRLTNEALY
                     ILRKFATDVLGTGNYAVADAFTLRPLFDNLAAPLATHRDIRYAKTIVLIGGEPEELQP
                     LTGKQIRQAVRNGGAKFILINNTRIRLREQAAQFIHVNAGSEDAAVLALADVSQAKGC
                     AQKMGIDAKELEAAHRTINETDGDIVIMFGGELSAAAQTILAQLPSTLVRDGRRVLVH
                     PLPLFNNSIGAQDMFADAKDINELLNGTSNSLRGLYIAGSLLPSHLKNRPDALSNVDF
                     VVAQELFETETTAYADVVFPAASFAEVDGTFTNSGGLVQRVRKAIEP"
BASE COUNT          425 a          479 c          521 g          415 t
ORIGIN      
        1 cgtgatgtcc actgaactaa tcaaagtaac catcaacggt cgcgactttc aggtcgcgaa
       61 aggcgcccgt ttgatcgacg tgtgccgcga gaaccagttc gacatcccgt cgttctgcta
      121 ttacgccgat ctggctttgc aggcttcatg tcgcatgtgt ctggtgcgta ttgaaaaaat
      181 gccgaagctg caaacctcgt gcacagtcat ctgtaccgac ggcatggtag tgaccacgca
      241 aagcgaagag attgagaaag cccagcgttc catgctggag ttcctgctgg cgaatcaccc
      301 tctcgattgt ccggtttgtg atcgaggcgg cgaatgcgaa ttgcaggagc tcacctttga
      361 ttggggcaac ctcgaggagc gcttcattga acgcaagaac gcccagccag aaaaatatct
      421 ttctccgatg gttgcgaacg atccgcaacg ctgcattctt tgtaagcgct gtacacgcgt
      481 atgtgacgaa tggatgggcg agcaggcgat agaagccggc aatcgcggcg ctaacacagt
      541 cattggaacc tatggtggtt ggttgaactg cacggaatgc ggcaactgca tcgaggtctg
      601 tcctacggga accttgctgg atggcaccta tcgtcatcag gcgcggccat gggagctcaa
      661 tcaaactgtg tcgacctgtg cctattgctc tgatggttgt gaaatgtcgc tcggttcccg
      721 cggcgcagag ttaatgcgaa tcgtcgcgcg cgatcggtac gtgaacgggc acaacggcga
      781 gttcctctgc gtcaagggcc gtttcggtca tccattcgtc aaccacgaag agcgccttcg
      841 tatgcccatg attcgttata agaaaggcgg caagctgatt ccggcgacgt gggacgaggc
      901 gattcgtctc actgccgcaa agctcagcga gattgccgag gcaagcggcg gggactcgat
      961 cggcgtgatt ggcagtccgc ggctcacaaa cgaggcgctc tacatcttac gtaaatttgc
     1021 gaccgacgtg ctgggcaccg gtaattatgc ggtcgccgac gcatttacat tgagaccact
     1081 cttcgacaac cttgctgcgc ctctggctac ccatcgcgac atacgttatg caaaaacgat
     1141 cgtcttgatt ggcggcgagc ccgaagaatt gcagccattg accggcaaac agattcgtca
     1201 ggccgttcgt aatggcggtg caaaattcat cctgattaac aatacgcgga ttcggctgcg
     1261 cgaacaggct gctcaattca ttcacgtcaa cgcgggtagc gaagatgcag ctgtgcttgc
     1321 gctcgctgac gtttcgcagg cgaaaggttg cgcgcagaag atgggtatcg acgctaagga
     1381 gctcgaagcg gcgcatcgca cgatcaatga aacggatggc gatattgtga tcatgttcgg
     1441 cggagaattg agcgctgcag cgcaaaccat tcttgctcaa ctcccgtcaa cacttgtccg
     1501 agacggtcgt cgcgtactgg ttcatcctct gccgcttttc aacaacagca tcggcgcgca
     1561 ggacatgttt gccgatgcga aagatattaa tgaattgctc aatggaacaa gcaattcact
     1621 gcgcgggctc tatatagctg gcagtctatt accgagccat ctgaaaaacc ggccggatgc
     1681 attaagcaat gtcgattttg tcgtcgcgca ggaattgttt gaaacagaga ctactgccta
     1741 cgcagatgtg gtttttccgg cggcttcatt cgccgaggtg gacggcacat ttaccaacag
     1801 tggtggttta gtacaacgcg tgaggaaggc cattgagcct
//
LOCUS       DATILV010000464         5026 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4453683, whole genome shotgun sequence.
ACCESSION   DATILV010000464 DATILV010000000
VERSION     DATILV010000464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5026
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4453683"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(774..1433)
                     /locus_tag="VLJ17_10515"
     CDS             complement(774..1433)
                     /locus_tag="VLJ17_10515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018183850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23448.1"
                     /translation="MTTKLKLAILASAAVLSLAGAGILQAQQNNMSFFVTSVGSGKGG
                     DLGGLAGADAHCQALAQAAGSTGKTWRAYLSSNTPAGGQATNARDRIGNGPWQNAKGA
                     VIARDVSELHANANINKETLLDEKGNRIKVRGDTPNMHDMLTGSDMEGRAFPPNLNLT
                     CNNWSSSTFGSAMLGHGDREGIADTVYQHSWVSSHMSRDCTQPGLVATGGNGLFYCFA
                     Q"
     gene            complement(2098..2343)
                     /locus_tag="VLJ17_10520"
     CDS             complement(2098..2343)
                     /locus_tag="VLJ17_10520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23449.1"
                     /translation="MSSLNAAGRRTNAVPAQSASFILPFFLPGKVVGTILGIAPDCFL
                     KTEPGEYVAYFVALCPAGVMVAASLARCVDSRAADSI"
     gene            2498..3352
                     /locus_tag="VLJ17_10525"
     CDS             2498..3352
                     /locus_tag="VLJ17_10525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23450.1"
                     /translation="MRYRKAFHSSFQATASLAASLAVLLLPMMVASAHAFDETKYPDL
                     KGQWDRTAAPRWLDAKSAPFTPEYRAIFEENLKDQAAGGQGTDPTFTCVAPGMPRVMN
                     AYEPFEIVVTPRTTHILMDHIHDSRRIFTDGREWPKEMQPSFSGYSIGKWIDEDGDGR
                     YDVLVVETRGLRGPRSYDSTGMPFHADNETVINERIYLDKADKNILYDEITVNDHALT
                     RPWTAVKKYRRKPDKQPMWREAVCAENNPHVVIADEPYMLSADGFLMPAKKDQAPPDL
                     KYFPQARK"
     gene            3420..4262
                     /locus_tag="VLJ17_10530"
     CDS             3420..4262
                     /locus_tag="VLJ17_10530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23451.1"
                     /translation="MLSHRCFGSLLAGALVMSLTGAQAHDESKYPDWAGQWRRPPGVN
                     NQWEPTKPRGQEGAPLTPEFQAIFEANLKDQAEGGQGTDPTYTCIPDGMPRAMNVIFP
                     MEMVITPNTTYIHIEYLMMFRRIYTDGRPFPEDTDSSFMGYSIGKWVDTNGDGRFDEL
                     LVETRFLKSPRAFDSSGIPLHPDGKTIVHERFYQDRDKPDVLHDEVTTIDNALTRPWT
                     VTKHYNRVRNPIWVEAICSENNDHIKLGNENYMRSADGLLMPAKKGQKPPDLRYFNIQ
                     DAKN"
     gene            4417..>5026
                     /locus_tag="VLJ17_10535"
     CDS             4417..>5026
                     /locus_tag="VLJ17_10535"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HSV23452.1"
                     /translation="MMRIKHTLLSTAASLAVALATSGLGPAAAQAEPGLSGQVTAPTG
                     PMEGVLVTAKKNGSTIAYTVVSDARGRYSFPAGKIEGGEYTLRIRATAAELDGASRDG
                     ALQATIDPQKPTTVDLKTKKTRNLPAQLVNAEWIMSVPGTDDQKAQLLNCVGCHTLER
                     IVRSTHNADEFTQVIHRMANYAQVSQPIKPQRRMDPEWAPKPE"
BASE COUNT         1075 a         1558 c         1453 g          940 t
ORIGIN      
        1 cggtttctgg ccgagagtgt cgaacaaaca aaccgatgaa atgaatcccc cggctccggc
       61 gggtgcagct cgctccgctt gcgggaagaa gccgtcaccg ccacgttagg gcgatgcgga
      121 tgatttcact ttccgcgggc cgattgatgc aggcagtatc tcgcgaaaga acggctccga
      181 gccaggcggc ccgaaggcca tgtagcccgc gacgctaacg ccccgccatc ttgccctccg
      241 gtccgccgct gcgatgttgg ccgcgacatc ctgcagaaac gcgggtgttt aacccggccg
      301 cctcattcaa aggtcagcgg gggcaccagc cgcgtctttg gtccaacccg gacgcgacgc
      361 tttcgccatg acggcgattc cacaggaggc ctgcgcagcc tcgtgcaaag aaccgccatc
      421 gtgcccccac ctcttcacct ccacaacccg gccgaaggct tctcccttag gcgaacccga
      481 gggagaagac catcgcaacc gccaacgttt gcgttcacat ctcccgcagc gacaacatat
      541 gcgaggtgat ctccgtataa ggtcgagggc cagttgcagg atcggatcga gccgcggccg
      601 atgaagtcgg cgggggagcc agcgccgtga gtgagtcgtc aattcgattt ttttaaaatt
      661 ccgcgatctt aaaaaaatgg ccgggacaag cccggccatt tcattcggct ttcccccata
      721 ccgccatccg gacggcgatc ggcaaagatc gccggcggcg catgcgggtc gcgttattgg
      781 gcgaagcaat agaacagtcc gttgccgccg gtggcaacga ggccgggctg ggtgcaatcc
      841 cgcgacatgt gcgacgaaac ccaggagtgc tggtaaaccg tatccgcgat gccttcccgg
      901 tcaccatggc ctagcatggc gctgccaaac gtgctgcttg accagttgtt gcaggtgagg
      961 ttgaggttcg gtgggaacgc acggccctcc atgtccgaac ccgtcagcat gtcgtgcatg
     1021 ttgggcgtat cgccgcgcac cttgatgcga ttaccctttt cgtcgagcaa ggtttccttg
     1081 ttgatgttgg cattggcgtg aagttcactg acgtccctgg cgatcaccgc acccttggcg
     1141 ttctgccacg gcccgttgcc gatgcggtcg cgagcgttgg tcgcctgacc gcccgcaggc
     1201 gtgttactgc tgagataggc gcgccaagtc ttgccggtcg acccggccgc ctgtgccagc
     1261 gcctggcaat gggcatccgc gccggcgaga ccaccgaggt cgccaccctt gccggacccg
     1321 acgctggtaa cgaagaacga catgttgttt tgctgggcct gtaggatgcc agccccggcg
     1381 agcgacaaca ccgccgcgga agcaaggatc gcgagtttca gcttcgtggt catggtttct
     1441 ccctttattg caaagcgtaa gcatcatttc ggctgttcgg ccgcattgtg cttggctgtc
     1501 ccggccgcat tttacatccc atgataacgc gcccggtgct gcaccgctag agcctcaagc
     1561 gagcattgct tggcgcgaca cggcgatcgc ggatgtggaa tccgccgtgc cttttcgttg
     1621 ccgtgatcga gcgcgatttg cctcaaccgt cgctcgtccg gttcatcacc gagcttcagg
     1681 gccgccttag ccgttatatt ccacgcttcc ggcgtgttga gcgcatcggc tatctttatt
     1741 gcatgttctc gcacatatcc cgttggaaag atctttggcg gtccgctcgt tcgattggcg
     1801 ccaatcatag ggaaaaactt cgcctgctgt tccctaggtg ttgtggagca cgtcaattaa
     1861 tttgattgcg gtctcgtaga tgtccttttc aagatacttg tcgcctacaa cgttatcacc
     1921 gtttgtgata atcaatgttc aacgcattcg gatactcgcc ccaaatgacc cggttgcctt
     1981 ggttggcccg cgccaaacgc aattccatga cgccgggaat gaagatgaaa accgaaaaac
     2041 ccgcctcgct tctttgaccg ggttgctcgc accgcatctg cggccggcgc accaacttta
     2101 aatggagtcc gccgcgcggg aatcgacaca tcgtgcaaga cttgcagcga ccatgacgcc
     2161 ggcagggcac agcgcaacaa agtaggcgac atattcacct ggctctgttt ttaaaaagca
     2221 atccggcgca attcctaaaa ttgtgcccac tacctttccg ggcagaaaaa aaggaagtat
     2281 gaagctggcc gattgcgccg gcacggcgtt ggtccgcctg cccgcggcat ttagcgagct
     2341 cattgtcggg atcaaaacga tgcccgaggg ccaccggcat gttgacccgg gcggtcgtcc
     2401 ggcgagataa tccaatccag ccccagcccg tcggctggcg gcggaacaat aagcatagtg
     2461 actgaaattt ggcaaagatg acgagcggag cacgcgcatg cgttaccgga aggcgtttca
     2521 ttcaagcttc caggcgacgg catcgttggc cgcgagcctg gcggtgctac tgcttccgat
     2581 gatggtcgcg agcgcccacg cattcgatga gacgaaatat cctgacctca agggccaatg
     2641 ggaccgcacc gcggcgccgc gctggctcga cgccaaatcg gcgccgttca cgccggaata
     2701 tcgtgcgatt ttcgaagaga atctcaaaga tcaggctgcc ggcggacagg gtaccgatcc
     2761 gaccttcacc tgcgtcgcgc ccggcatgcc gcgggtgatg aacgcgtatg agccctttga
     2821 aatcgtcgta accccgcgga cgacccatat tctgatggat cacattcacg actcgcgccg
     2881 catctttacc gacggccgcg aatggccgaa ggagatgcaa ccgagtttct ccggctattc
     2941 tattggaaaa tggatcgacg aggatggcga cgggcgttac gacgtgctgg tggtggagac
     3001 ccgcggtctt cgcggcccgc gctcctacga ctcgaccggc atgccgttcc atgccgataa
     3061 cgagaccgtg atcaacgagc gcatctacct cgacaaggcc gacaagaaca tcctctacga
     3121 cgagatcacg gtgaacgacc atgcgctgac caggccgtgg accgcggtca agaaatatag
     3181 gcgcaaacct gacaagcaac cgatgtggcg cgaggcggtg tgcgccgaga acaaccccca
     3241 cgtggtcatc gccgacgaac cctatatgct cagcgccgat ggatttttga tgccggccaa
     3301 gaaggatcaa gcaccgccgg acttgaaata ttttccgcag gcgcgaaagt agacggaaac
     3361 aacatgacgc ctatgggttg taacgaccca ccaaaaacta tctgcctggg agaaacgtga
     3421 tgctgtctca tcgctgtttt ggctcgctgc tcgctggcgc attggtcatg tcgctcaccg
     3481 gcgcacaggc acacgatgaa tcgaaatacc ccgattgggc cgggcaatgg cgccggccgc
     3541 cgggtgtcaa caaccagtgg gagccaacca agccgcgcgg ccaagagggc gcgccgctga
     3601 cgcctgaatt tcaagccatc tttgaagcca atctaaagga ccaggcggaa ggtggacagg
     3661 gcacggatcc gacctacacc tgtatcccgg acggcatgcc gcgggccatg aacgtcatct
     3721 tcccgatgga aatggtcatc acgccgaata cgacctacat ccatatcgaa tatttgatga
     3781 tgttccgccg catctatacc gacggccgcc cattccccga agacaccgat agttcgttca
     3841 tgggctattc gattggcaag tgggtcgaca ccaacggcga tggccgcttc gacgaattac
     3901 tggtcgaaac ccgcttcctg aaaagcccgc gcgcattcga ttcaagcggc attccgctgc
     3961 accccgacgg caagaccatt gtccacgagc ggttctacca ggaccgggac aagccggacg
     4021 tgctgcatga tgaggtcacc accatcgaca atgcgttgac tcggccatgg acggtgacga
     4081 agcactacaa ccgcgtccgc aatccgatct gggtcgaagc aatctgttcc gagaacaacg
     4141 accacatcaa gctcggtaac gaaaactata tgcgcagcgc tgacggcttg ctcatgcccg
     4201 ccaagaaggg ccagaagccg ccggacctga ggtacttcaa catccaggac gccaagaatt
     4261 gagttccgta ggatgggtag agggaagcaa atccgatacc tttctatgcg gcaacgccga
     4321 tgatgggctt cgccatcgtg caatccatcc tgcgcatccg gtttgacccg gcggcgaaca
     4381 atcaggatgc tgacaacaca cgccaaggga gtgaccatga tgcggataaa gcacacgctg
     4441 ttatcgacgg ccgcgagcct cgcggttgca ctcgcgacct cgggcctcgg ccccgctgcg
     4501 gcgcaggcgg agcccgggct ctccggccag gtgaccgcgc cgaccggccc gatggaaggc
     4561 gtcctcgtca ccgccaagaa gaacggctcg accatcgcct acacggtggt cagtgatgcc
     4621 cggggccgct acagcttccc ggccgggaag atcgagggcg gcgaatacac cctgcgtatt
     4681 cgcgcgaccg ccgcagagct tgacggcgcc agccgggacg gcgccctcca ggccacgatt
     4741 gatccgcaaa agccgacgac ggtcgatctc aagaccaaga agacccgcaa tcttccggct
     4801 caactcgtca atgctgaatg gatcatgagc gtgccaggca ccgacgacca gaaggcgcag
     4861 cttctcaact gcgtcggctg ccacaccctg gaacgcatcg tacgctcgac ccacaatgcc
     4921 gacgagttca cacaggtcat ccatcgcatg gcgaactacg cccaagtgag tcagccgatc
     4981 aagccgcaga ggcggatgga cccggaatgg gcgcccaagc cggagt
//
LOCUS       DATILV010000465         1958 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2412669, whole genome shotgun sequence.
ACCESSION   DATILV010000465 DATILV010000000
VERSION     DATILV010000465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1958)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1958)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1958
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2412669"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..631
                     /locus_tag="VLJ17_10540"
     CDS             <1..631
                     /locus_tag="VLJ17_10540"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSV23453.1"
                     /translation="SSNPYVIAARNELPAKNLRELIDVLKANPEKLTLGTAGPGSGQH
                     VSGIYFQSVTGAALRFVPYRAGSSDIMKDLVGGHLDLTFDQAISALSYVRNGQIKAYA
                     ITADARLAAAPDIPTIDEAGAPGVYISTWSGLWVPKGTPRNVIRTLTNAAMDALANEE
                     VRRRLEDLGQMIPPRKQQTAEALGAYHKAEIEKWWPIIKAANISVEPGR"
     gene            636..1871
                     /locus_tag="VLJ17_10545"
     CDS             636..1871
                     /locus_tag="VLJ17_10545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV23454.1"
                     /translation="MDLIIRNAQLTDRGFGELADIGVVDGRIVAIERGLSAQAEVYDA
                     EGRLACPGLIESHIHLDKSRIIGRCAPQERAELSPIKGVAPLKKSMTIEDIRARAAQT
                     LEQCIMHGTTRMRTQVELDPGIGMRGFDAITSLVDDYKWAIELEICVFPQEGLSNYPG
                     TEELLVEGLKRGAKVLGGAPRYDTDHAGQIERIFALACEFDVDIDMHLDVGNTPDAMD
                     IHLVRDLTEKYHRGGRVVVGHMAKLSLLPPGQVTTIARQLADAGIAVTVLPATDLFLM
                     GRDQDHSIRRGVADANLLLEHGVNCSLSSNNILNPATPYGDCSLIRMANLYANVLQID
                     RAAQLRECFRLLTDRSASLLNLRDYGFAVGYPADVVIINAQSPEQAISEIAQPVAVFK
                     NGRRTVRWDLPKLRRPQQL"
BASE COUNT          408 a          561 c          594 g          395 t
ORIGIN      
        1 gtcaagcaat ccgtatgtga ttgcggcgag aaatgagttg ccagcgaaga atttgcgcga
       61 gctgatcgac gttctcaaag ctaaccccga gaagctgact ttgggcactg ccggacccgg
      121 ctccgggcaa catgtcagcg gcatctactt ccagagcgtg accggagctg cgctgcggtt
      181 tgtgccgtat cgcgccggct cctctgatat catgaaagac ctggtcggcg gacatcttga
      241 tttgacgttt gatcaggcca tctcggcgtt gtcctatgtg cgcaacggac aaatcaaggc
      301 ctatgcgatt acggctgatg ctcggctggc cgccgcgccc gatattccaa ccatcgacga
      361 ggccggtgcg cctggcgtgt atatctcaac gtggtccgga ttgtgggtgc ctaagggtac
      421 gccaaggaac gtcatccgaa cgctcacaaa cgctgccatg gacgcgctcg ccaacgagga
      481 ggtgcgtcgc cggcttgagg acctgggtca gatgattcca ccacgcaagc aacaaacagc
      541 agaagcgctt ggcgcgtacc acaaagccga gatcgagaaa tggtggccga tcataaaagc
      601 cgcgaacatc agcgttgaac ccggccgctg acgcgatgga tctcatcatc cgcaacgcgc
      661 agctgaccga ccgcgggttt ggcgaactcg cagacatcgg tgtcgttgac ggccgcatcg
      721 tagcgataga gcggggactt tcggcgcaag cggaggtcta tgatgccgag gggcggcttg
      781 cttgtccggg cctgatcgag agccacattc atctcgacaa atcgcggatc atcggccgct
      841 gcgcacccca ggaacgcgcc gagctcagtc ccatcaaagg ggtggcgccg ttgaagaaga
      901 gtatgacgat tgaagatatt cgcgctcgcg cggcgcaaac ccttgagcag tgcattatgc
      961 acgggaccac tcgtatgcga acgcaggtcg agctcgatcc tggcatcgga atgcgcggat
     1021 tcgatgccat aacgtcgctg gtcgacgact acaaatgggc gattgagctc gagatctgtg
     1081 tgttccctca ggaaggattg agcaactatc cggggacgga agaactcctg gtggaagggc
     1141 tcaagcgcgg cgccaaggtt cttggcggcg cccctcgcta tgacacggac catgccggtc
     1201 agattgaacg catttttgcg cttgcgtgcg agttcgacgt cgacatcgac atgcacctcg
     1261 atgtgggcaa cacgcccgac gccatggaca ttcacctcgt tcgggacctt acggagaagt
     1321 accatcgtgg tggccgtgtc gtggtcggtc atatggccaa actatcgctg ctgccgccgg
     1381 gccaggtgac gacgatcgca cgccaattgg ctgatgccgg aatcgcggtt accgtcttgc
     1441 cggcaaccga tctgtttctg atgggacgcg accaggacca cagtatccgg cgtggcgtgg
     1501 cggatgcgaa tttgctgctg gagcacgggg tgaattgctc cctttcctca aacaatattc
     1561 tcaatccggc aaccccgtac ggcgactgct cgttgatccg catggcgaac ctctatgcca
     1621 atgtgctcca gatcgatcga gcggcccagc tgcgcgaatg cttccgattg ctgaccgatc
     1681 ggtcggcgtc gctactgaat ttgagggatt acgggttcgc ggtgggctat cctgctgacg
     1741 tcgtcatcat caatgcgcaa tcgcctgagc aggccatttc tgaaatcgct caaccggttg
     1801 ccgtgttcaa aaacggcaga cgaaccgttc ggtgggattt acccaagctg cggcgaccgc
     1861 aacaactatg agtattggca gttcgaaacg gctcttgtcg cggccggcca gttgcgctgg
     1921 cgcaattgcg tccgttgcgg cggcaatcct gaaatccc
//
LOCUS       DATILV010000466         2896 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2412702, whole genome shotgun sequence.
ACCESSION   DATILV010000466 DATILV010000000
VERSION     DATILV010000466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2896
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2412702"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(109..747)
                     /locus_tag="VLJ17_10550"
                     /pseudo
     CDS             complement(109..747)
                     /locus_tag="VLJ17_10550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611132.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
     gene            complement(748..2124)
                     /locus_tag="VLJ17_10555"
     CDS             complement(748..2124)
                     /locus_tag="VLJ17_10555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018099234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HSV23455.1"
                     /translation="MGRNKSKDKDRRTMSVVHPNAAAIDVGATMHMAAVNADRTPEPV
                     RSFGTFTTDLHRLVDWFAECGVDTVVMESTSVYWIPIFELLDARGFAVFLVNARDAKH
                     VPGRKTDVSDAQWLQRLHSFGLLRASFRPKGHIAELRAYLRQRERLLQYGASHIQHMQ
                     KALTEMNVQLHHVVTDITGATGLRIIRTILGGERNPAVLARMRDRRCHATVETIEKAL
                     AGNYRAEHLFALEQALALYDTYQQKASACDVRIEAVLKELSVRRGRKAGPLPSPRQNR
                     SRQQNSLHFDVRAALFALLGKDLTQINGLGPYLTLRLVAECGDDLSAWPSAKHFTSWL
                     CLAPSNKISGGKVLSSRTRRSGSRAAALLRLAAATVGRTDTALGAFYRRLSARIGKAK
                     AVTATARKIAVLFYNAVQHGMEYVDPGASSYETRYRARVIDNLHRRAKAFGFVLQPID
                     PTPSIAVS"
     gene            complement(2316..2732)
                     /locus_tag="VLJ17_10560"
     CDS             complement(2316..2732)
                     /locus_tag="VLJ17_10560"
                     /inference="COORDINATES: protein motif:HMM:NF013842.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSV23456.1"
                     /translation="MSESVGIDSPEGGEGMPKSYSADLRERVIEAVACGTSRHEAAEL
                     FGIAVSTAVKWWQHWRATGSTAPKPRGGSTSRLEEHRTLILGLVKEQPDSTFEELLAA
                     LRKRRIRTSRSALWRFFERHDITFKKTISDSVRLWA"
BASE COUNT          563 a          859 c          876 g          598 t
ORIGIN      
        1 gcgtcacgct cccttgaacg cgtgtccatg ctaaaaacgg gccacgaggt caactgtgct
       61 tggctgcagg gtcgcgacgg ccgatcatag tcaaagcaaa tgtttctgtt agagcagtcg
      121 ccgattagat tgaccatatc cagaatttgc gaggtatgcg gcgcattcag ctttggagag
      181 ttgattgaga cacgaggcga tggtcttgca gaggcttctg acggtgaatg cgctgttctt
      241 gagcgtatat gaagcaattt tacggagaag tgccttgagc ttggcgaata gtttctcgat
      301 cggattcaaa tcggggctgt atgcggggag ataaaatggg atcgccccgc gagcctcaat
      361 ggcttcctcg attccatcga ctttgtgaac actgacgttg tccatgaaca caatgtcgcc
      421 cctcgtcagc gccggagcga gaaactgttc cgtataggcc ttgaacatct cgccggtcat
      481 cggtccttcg agcacgaagg gcgcagtgac gcgatcgtgg cgtagcgcag cgatgaaagt
      541 gatggtcttc cagttgccat gcggcacctt ttggacaagc cgctcgccct gcggggcccg
      601 cccatagagg cgggtaatcg tcgtggagac gctggtttca tcgataaaaa ccagccgctt
      661 cggatcaagc cttggctgcc gcttttgcaa ggccttacgt gcggcggcga cgtctggccg
      721 gtcctgctcg gcggcacgca ggctttccta agaaacagcg atgctgggcg ttgggtctat
      781 gggctggagc acaaagccga aggccttcgc tcgccgatgc agattgtcaa tcacccgcgc
      841 gcggtatcgg gtctcgtagg acgatgcgcc cgggtctaca tattccatcc cgtgttgcac
      901 ggcgttgtag aacagcactg cgatcttgcg cgccgtggcg gtcactgcct tggccttgcc
      961 gatgcgcgcc gagagccgtc ggtagaaggc gcccaacgct gtgtcggttc gtcccacggt
     1021 tgcggcagca agccgcagga gcgccgcagc ccggctgccc gaacggcgtg tgcgcgacga
     1081 gagcaccttg ccaccggaaa tcttgttgct cggcgccagg cagagccatg aggtaaagtg
     1141 tttcgcactc ggccaagcgg agaggtcgtc gccacactcg gcgacgagcc taagcgtgag
     1201 gtaggggccg aggccgttga tctgggtaag gtccttgccg agtagcgcga agagcgctgc
     1261 gcggacatca aagtgcaatg aattctgttg acgggatcta ttctgacgtg gcgacggcaa
     1321 cggacctgct ttgcgacccc gacggacgct gagttccttt aatacggcct cgatccggac
     1381 gtcgcaggct gatgccttct gctggtacgt gtcgtagagg gcgagcgcct gttcgagggc
     1441 gaacaggtgc tcagcgcggt agttgccggc cagcgccttc tcgatcgtct cgacagtggc
     1501 gtggcaacgc cgatcccgca tgcgcgccag cactgccgga ttgcgctcgc cgccgaggat
     1561 cgtgcggatg atccgcagcc cggtcgcacc ggtaatatcg gtgacgacgt ggtggagctg
     1621 cacgttcatt tcggtcaacg ccttttgcat atgttggata tgtgacgccc catattggag
     1681 cagacgctca cgctgacgca ggtaggcacg caactcggcg atgtgacctt tgggccgaaa
     1741 gcttgcgcgc agtagaccga aggagtgaag ccgctgcagc cactgtgcat cactgacgtc
     1801 ggtcttgcgt ccgggtacgt gcttggcatc gcgcgcattg acgaggaaca ccgcaaagcc
     1861 acgggcgtcg aggagctcaa agatcgggat ccaatagacg ctggtcgatt ccatgacgac
     1921 cgtgtcgacg ccgcactctg caaaccagtc caccagccga tgcagatctg tggtgaaggt
     1981 accgaagctg cgcaccggct caggcgtgcg atctgcattc acggcagcca tgtgcatggt
     2041 agccccgacg tcgatcgcgg ccgcgtttgg atggaccacc gacatcgtgc ggcggtcctt
     2101 gtctttcgat ttgttccgac ccatcgccaa tcctccaact ggggggcgga agggctgggc
     2161 tgcgctgttg atcaatttcc taaacgggat cgcctgacga cgtcaccact ctcacgtgcg
     2221 caacaaccca tggaccatgt ttttttgcgg ggtaacttgc caccaaaaag ccgtcggccg
     2281 ctcccttcca tcaagaggat agacctcagc cgtttctacg cccacaggcg gacgctgtcc
     2341 gagatggttt ttttaaaggt gatgtcatga cgctcgaaga accgccacag cgcgctccgg
     2401 ctggtgcgaa tgcgccgctt gcgcaacgct gcgagcagtt cctcgaaggt ggaatccggc
     2461 tgctctttaa ccagccccaa tatcaatgtc ctgtgttcct ccagccggga tgtgctcccc
     2521 ccgcgcggct tcggcgccgt gctgccggtt gcacgccagt gctgccacca tttaaccgct
     2581 gtgctcaccg caatcccgaa aagctccgca gcttcgtgcc gagacgtccc gcatgcaacc
     2641 gcttcgatca cgcgctcgcg caaatcagca gaatacgatt tcggcatgcc ctcaccccct
     2701 tcgggagaat caataccgac agactcgctc atccttaacg ctttgtgaat ctgttcgatt
     2761 caaattcacc gggaaatgct gtaggggcgc aagccgaacc ggttgcgcag aacgctcccg
     2821 agacgatcgc gctggtcgcg ccagccacgc cttccttcga ccagcagcag atcagcgcaa
     2881 tgtcgcttga tctcga
//
LOCUS       DATILV010000467         1684 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1646180, whole genome shotgun sequence.
ACCESSION   DATILV010000467 DATILV010000000
VERSION     DATILV010000467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1684)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1684)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1684
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1646180"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(145..663)
                     /locus_tag="VLJ17_10565"
     CDS             complement(145..663)
                     /locus_tag="VLJ17_10565"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HSV23457.1"
                     /translation="MKIEELRAIQAPIKERYKEHPDTALITLKAQGRLGEGVTCNVQT
                     GKALVAAGLHPATGGNGLSACSGDMLLEALVACAGVTLNAVATAIGVVIRSGAVRAEG
                     DLDFRGTLGVAKDAPVGFQRIRLYFDLETDASEDELSTLVRLTERYCVVYQTLRQPPD
                     ITVSHHVSVARK"
     gene            complement(690..1226)
                     /locus_tag="VLJ17_10570"
     CDS             complement(690..1226)
                     /locus_tag="VLJ17_10570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23458.1"
                     /translation="MSKLVLCALLAMAPFAEAASVMDRYDAGGSVSKRYDAINPRTGE
                     FLPQVGRGTVSERQNVETIAQVAAETAQLLPSNRLGASPSPKAPKVSRGARPGRATTR
                     SPKTKFVNADHFKPSALQSKYKNDAEQFAKVNGCPAPVATMKFAVVGPENFETFAVTC
                     GAVVSMSIRCDSGRCRAM"
     gene            1458..>1684
                     /locus_tag="VLJ17_10575"
     CDS             1458..>1684
                     /locus_tag="VLJ17_10575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23459.1"
                     /translation="MKLSEQFKAPPQADKVTLPRTPAGNITAKEKLSLSQTMTGTSAK
                     FEIALRARLLGRLLGSVGPLALKVVGGGVFA"
BASE COUNT          328 a          510 c          473 g          373 t
ORIGIN      
        1 tgatcgtgag gtattgaggc gttcggtgct cgagtttttt ggcatcgagt tcaacgtatt
       61 cgtacgaaac gccaagttct tcgagcgccc atgcaacgcg cgtgccggaa ctggacggcc
      121 aggaatacag tttgattgtc atttttactt ccttgccacg gacacatgat gggacacagt
      181 tatgtccggg ggctggcgca gagtttgata cacgacgcaa tagcgctcgg tcaaccgaac
      241 aagcgtactc aactcatctt cggatgcgtc ggtctcgagg tcgaagtaaa ggcggatgcg
      301 ctgaaatcca accggcgcat ccttggcgac acccaaagtg ccgcgaaaat cgagatcgcc
      361 ttctgctcga accgcgccgc ttcgaataac gacgcctatc gccgtcgcga cggcgttgag
      421 cgtcacaccg gcgcaggcaa caagcgcctc aagcaacatg tcgcccgagc atgcgcttag
      481 tccgttgcct cccgttgccg gatgcaaccc tgccgcgacg agtgccttgc cggtttgaac
      541 gttgcaagtg accccctcgc ccagacggcc ctgggccttt agcgtgatca gcgcggtatc
      601 ggggtgctct ttgtaacgct cttttatagg cgcctggatg gctcgaagct cttctatctt
      661 cattgcactc tttccgtctc agtcctttgt tacatcgcac ggcaccggcc ggaatcgcaa
      721 cggatcgaca tcgacacaac tgctccgcag gttacggcga aagtctcaaa attctctggt
      781 ccgactacgg cgaacttcat tgtcgcgacc ggagcagggc agccattgac tttcgcgaac
      841 tgctccgcgt cgttcttgta ttttgactgc agcgccgaag gcttgaagtg atccgcgtta
      901 acgaacttcg tttttggaga ccgggtcgtc gctcgtcccg gcctcgcgcc acgcgatacc
      961 ttcggtgcct ttggtgatgg actggcgccg agcctgttgc tcggcagtag ctgcgccgtt
     1021 tctgccgcaa cttgggcgat cgtttcaaca ttctggcgct ctgaaaccgt gccgcgtccg
     1081 acctgcggca aaaattctcc tgtccgcggg ttaatggcat cgtatcgttt tgaaaccgac
     1141 ccgccagcat cgtagcggtc catgacgctg gccgcctccg cgaagggagc cattgccaac
     1201 agcgcacaaa gcaccaattt gctcatggta ttcaccgagt gccaagcagg atccgcgcat
     1261 agtaggcctt tcccgcgcgg acgggaaggc gacgcgggaa ttgcaggtac gcgcgcaatg
     1321 cgcggtagca cagtcccgca tcacgatatg aagattcgtg attttatgct ctgaattttc
     1381 cgcatcttgc tgccgatgca ttccaggttt ccgctgtagc atgcaacggc tggatccatc
     1441 ctgtcgcggg agtcaagatg aagctctctg agcaattcaa agcgcctccg caggccgaca
     1501 aggtaacgct gccacggacc cctgccggca acatcaccgc aaaggagaag ctctcgctct
     1561 ctcagaccat gacagggacg tctgccaaat tcgagatcgc gctgcgcgcc cgtctcctgg
     1621 gccgcctgct cggttcggtc gggcccctgg cgttgaaggt agtcggcggc ggcgtctttg
     1681 ccaa
//
LOCUS       DATILV010000468         4769 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_365713, whole genome shotgun sequence.
ACCESSION   DATILV010000468 DATILV010000000
VERSION     DATILV010000468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4769
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_365713"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..3530)
                     /locus_tag="VLJ17_10580"
     CDS             complement(<1..3530)
                     /locus_tag="VLJ17_10580"
                     /inference="COORDINATES: protein motif:HMM:NF024893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HSV23460.1"
                     /translation="MQRLLLSTAIALILVLVTALIGPLFVDWGRYRNIFETEISRLTR
                     WDVRIRGPIDVRFLPTPTLKLQQIVLGRSEGPASVRAEALRIELALGALMRGQFLASD
                     VELRAPEISLGFVSSERLEWSAPSFAFDPDAISIAHLAIEKGRVTLADGSGHSLILDG
                     LGFSGDVRSLRGPAKGEGSVVVDSESYLFGIAVDRAAADGAVKVRLLVDTVDRVRVGD
                     VDSSVWIEHGIPHFAGSLQWSHSARRSAQGFGEPWRFSARMRGNWEAAALEGINLQYG
                     AEDRPLQLRGQANLTFRGQLQVDVTLAATQIDLDRMLALPAAVRRRPLAAVRTMADNF
                     SAARLPPIRVNFGIGAEVVTLADAPLQRVSARLHGEGGTWNLDSLELRAPGGTQLRLG
                     GRLDRVARGTTFEGHGHIEARDSRTLVSWLVAGSDGEAFGGPFRAEGDVRLGGESIVF
                     DRFKAEFDRDTLEGNFAYFAPAADRSGRISATLSASNIDLDRAYALVQRISGDAALAW
                     ALPHEGSLSLNVSRASVAGVEARGTDMRLQFDERALTVERLAIDDYGGARVAGAGSID
                     IRTLAPRGAITLDLDVRSSDGVAALLEKFSAPAASALRRAAPRLIPAKLQGSLASDAQ
                     AAREVGMPAGASFKINGSAGAFALDLQGVTEVARDGSLLATFAQLSSAKVVVAGHVDA
                     HDGLTLVKAIGLDWLVSVDDRDGRLDFKASGRPDGSMAATAQITAGGLDVSVSGTLQA
                     AQSQAAAANLELSVAQANVRVPQTGTLPTTLMARLNYADGAVAFDQMIGTVAGSNIAG
                     RVAIGLSPTMRVDADIKLNAVDLPAVIAKAAGMPARRVGDGAAWSADPFIGGILGQIR
                     GRVAMASARAVLTPNLVAENLHGVLSFGPSDIVLDDFEAVIAGGRVSGRLAFERNGDE
                     LGARSHIRLTKADMAALFPDDRPPISGKLNMDAEIQGRGRSPVALIGSLQGNGSFSLE
                     GGRFARLDPSSFEAVIRSVDQGLPIELTRIREHMEAALGRGALSIQGDGSIVATTGQV
                     SLANTRLRAEGADIAISARCDLVAEALDVRLALIGPAGVGGADVGRPEIAITLQGPID
                     SPRRTLDIAALSDWLSTRAIAQNAKRLAAISPPLDAPVIESPPTSPPAARPAVPPNLA
                     TPEPATNVVGAVKPEAPTNPLPATKPAADTV"
     gene            3886..4518
                     /locus_tag="VLJ17_10585"
     CDS             3886..4518
                     /locus_tag="VLJ17_10585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HSV23461.1"
                     /translation="MTKTRGIFRCPVALAVVALAAFAAGHGPASAADPLTEEQIVKAL
                     TPITTRSLTLTPPAASAGTAEKKLLDSVRNRPAHSLTSSEREQIAAAAATKPSIDVEI
                     NFDYRSAKISRSAASMVNTLGRALSNADLSGTTFILAGHTDGKGSSPYNQDLSERRVD
                     TVRRYLVDHFKLSPTSLVAVGYGKTKLKNENDPFGAENRRVQVVNMQDNN"
     gene            4541..>4769
                     /locus_tag="VLJ17_10590"
     CDS             4541..>4769
                     /locus_tag="VLJ17_10590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008962399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSV23462.1"
                     /translation="MTHRQALEPNARQPLLSAVQLTKRFDALAANDSINLDIFGGEIH
                     ALLGENGAGKSTLVKIIYGLLRPTSGELRFSG"
BASE COUNT          947 a         1549 c         1451 g          822 t
ORIGIN      
        1 accgtatcgg ccgccggctt cgtggctggg agcggattgg tcggcgcttc aggcttcacg
       61 gcaccaacca cattggtcgc gggttcgggc gtcgccaaat tcggcgggac tgcgggccgc
      121 gcggctggag gtgatgtcgg gggcgattca atcactggcg cgtcgagcgg aggcgaaatt
      181 gctgcgaggc gctttgcatt ttgcgcgatg gcgcgcgtcg aaagccaatc ggacaacgcc
      241 gcaatgtcga gcgtgcgtcg cggtgaatca attggcccct gaagcgtgat cgcgatttct
      301 ggccgaccga catcggcgcc gccgacaccg gcgggcccaa tcagggcgag ccttacgtcg
      361 agtgcttcgg cgaccagatc gcaccgcgca gaaattgcaa tatcagcgcc ctcagcgcgc
      421 aacctggtgt tggcgaggct cacctggcca gtcgtggcca cgatggagcc gtcgccctga
      481 attgagagcg caccgcgacc gagcgcagcc tccatgtgct ccctgatccg cgttaactct
      541 atgggcaaac cctggtcgac actgcggatc accgcttcga atgaggaggg atcgagccgc
      601 gcgaacctac cgccctcgag gctaaaggag ccattgccct gcagggagcc gatgagcgcg
      661 accgggctcc gcccgcggcc ctggatttcg gcatccatgt tcagcttgcc agatatcggc
      721 gggcgatcat ccgggaacag cgcggccata tcggccttcg taagtctgat gtggctcctg
      781 gcgccgagtt cgtcgccatt acgttcgaac gcgagtcgac cggaaacgcg gccgccggca
      841 attacggcct cgaaatcgtc caggacgatg tccgacgggc cgaaactcag cacaccgtgc
      901 agattctcgg cgaccaagtt cggcgtcaac acggcccgtg ccgacgccat cgcgacccgt
      961 cctctgattt ggccaagaat gccgcctatg aacggatcag ccgaccacgc cgccccatcg
     1021 ccgacgcgcc tcgccggcat gccggccgcc ttggcgatga cggccggaag atccacggcg
     1081 ttgagcttga tgtcagcgtc aacgcgcatc gttggcgaca gaccgatggc gacccgacct
     1141 gcgatgttac tcccggcaac cgtgccgatc atttggtcga acgcaacggc tccgtcggca
     1201 taatttaggc gcgccatcaa cgtggtcggc agtgtgccgg tctgcgggac ccgcacattc
     1261 gcctgcgcaa ccgaaagctc gagattcgcg gctgcggctt ggctttgcgc cgcctgcagc
     1321 gttccgctta ctgaaacatc gaggccgccc gccgtgatct gcgccgttgc tgccatcgaa
     1381 ccgtcagggc gcccggaggc cttgaagtcg agccggccgt cccggtcgtc gacgcttacc
     1441 agccaatcga gcccgatcgc cttcaccagg gtgaggccgt cgtgggcatc gacatgaccc
     1501 gcgacaacga cttttgccga actgagctgg gcgaaagtgg cgaggagcga accgtccctc
     1561 gccacttcgg tgacaccctg caagtcaagc gcgaacgcgc cagcgctgcc gttgattttg
     1621 aaactggcgc cggcaggcat tccaacctcg cgggcggcct gagcatcgct ggcaagggag
     1681 ccctgcaact tggcaggaat caagcggggc gcggcgcggc gcagtgcgga ggccgctgga
     1741 gcgctaaact tctccaacag tgccgctacg ccgtccgacg aacgcacatc gaggtcaagc
     1801 gtgatcgcgc cgcgcggcgc cagcgtgcga atatcgatac taccggcccc cgcgacgcgc
     1861 gcgcctccgt aatcgtcgat ggccaagcgt tcgaccgtca gcgcccgctc gtcgaactgc
     1921 aagcgcatgt ccgtgcccct ggcttcgacg ccggcaaccg acgcccggct gacattgagc
     1981 gagagcgatc cctcgtgcgg caacgcccac gccaaggcag catcgccaga gatccgctgt
     2041 acgagcgcat aggctcgatc gagatcgatg ttggaggcgc tgagcgtggc cgatatccgc
     2101 ccggatcggt ccgccgccgg cgcgaaatag gcgaaattgc cctccagggt gtcgcggtcg
     2161 aattcggcct tgaagcggtc gaatactatg ctttccccac cgagacgcac gtccccttcg
     2221 gcgcggaacg gcccgccgaa ggcctccccg tcgctgccgg ccacgagcca ggagaccaac
     2281 gtgcgcgagt cccttgcttc gatatggccg tggccctcaa aggttgtgcc ccgagcaacg
     2341 cgatccagac ggccgcccaa ccgcaactgg gtcccgccgg gcgcgcgcaa ttcaagcgaa
     2401 tccagattcc atgtgccgcc ctcgccgtgc agcctggcgc tcacgcgctg tagcggcgca
     2461 tcggcaaggg tcacgacctc ggcgccgatt ccaaaattca cgcgtatcgg cggcaacctc
     2521 gctgcgctga aattgtcggc catagtgcgc accgcggcca agggtcgacg ccgcaccgcc
     2581 gccggtaagg cgagcatgcg atcgagatcg atctgcgtcg ccgcaagtgt cacgtccact
     2641 tgcagctgtc cccgaaaggt caggttggct tggcctcgaa gctggagggg tcggtcctcc
     2701 gccccatatt gaagattgat cccctccagt gccgccgctt cccagttgcc gcgcattctc
     2761 gcactgaagc gccatggctc gccgaacccc tgggcggagc gtctggcaga gtgcgaccac
     2821 tggagggaac ccgcgaaatg cggaatacca tgctcgatcc agacagagct gtccacgtcg
     2881 ccgacgcgga cgcgatcgac ggtatcgacg agcagccgca ctttgacggc accgtccgca
     2941 gctgcgcgat ccaccgcgat gccaaagaga tagctctcac tgtcgaccac gacggaaccc
     3001 tcgcccttgg cggggccgcg gagggaacga acgtcaccgc taaatcccag cccatcgaga
     3061 atgagcgaat ggccagaccc gtcggcaagc gtgacccgtc ccttctcgat cgccaggtgg
     3121 gcgatcgaga ttgcgtcagg atcgaaagcg aatgagggag ctgaccattc gagacgctcg
     3181 gagctaacga atcccagcga gatctcgggc gccctgagct cgacgtcaga cgccaggaat
     3241 tggccgcgca tgagcgcgcc caatgcaagt tcaattcgta gcgcctcagc ccgaacgctc
     3301 gccggccctt cggatcggcc cagcacgatc tgctgcagct tcaatgtcgg tgtaggtagg
     3361 aagcgcacat cgattggacc gcgaattcgc acgtcccatc gggtgaggcg agaaatctcg
     3421 gtttcgaaga tgttgcgata gcgtccccaa tcgacaaaga gggggccgat caacgccgtc
     3481 accagcacca ggatcaacgc aatcgcggta ctgagcagca gcctctgcat tccgctacct
     3541 ccgcaccaac ttacccacgg cggacgttga aatcccgacc gccataatca agcacaaatt
     3601 gcagggtgtg tctgctggcg gcacatcaca atggcgacat gccaaaatga atccagatag
     3661 gcggaaatgc gcaggccgaa ctttcgcacg caatgccggt ctcgcctgaa ctctccgcaa
     3721 ctgaccattg cttggatcgc tcgaatatcc gagtcatctt atggtaagtt cgtgacagat
     3781 cttaggggtg gaagggatct caatggcgtt gcaagcacct ggaatctcaa ttcgccctgg
     3841 tgtgtcggaa ctgccgagga tcggtttatg agacggaaag gcacaatgac gaaaactcgt
     3901 ggaatattca ggtgccccgt tgcgttggcg gtggtcgctc tggccgcgtt cgcggccgga
     3961 cacggtcctg cctctgcggc ggacccgctc acggaggagc agatcgttaa ggcgctgact
     4021 cccataacga cccgcagcct taccttaacg ccgcctgcgg cctctgctgg caccgcagag
     4081 aagaagctcc ttgattctgt aaggaaccgt ccagcccatt cgcttacgtc aagcgagcgc
     4141 gagcaaatcg cggctgcagc cgcgaccaag ccgagcatcg acgtcgagat taactttgat
     4201 tatcggtcgg ccaagattag ccggtccgcc gcatccatgg tcaataccct cggcagggca
     4261 ctttcgaatg cggatttgag cggaacaacg ttcattcttg ccgggcatac cgatggcaag
     4321 ggcagctccc cttacaacca ggacctctcg gagaggcgcg tcgacacagt caggcgttac
     4381 ctcgtcgatc acttcaagct gtcgccgacg agtctcgtgg ccgttggcta tggcaaaacc
     4441 aagcttaaga acgaaaacga tccatttggc gcggagaacc gccgtgtgca ggtcgtgaac
     4501 atgcaggata acaattgaag gcggtgtgtt cactgcgatc atgacgcacc gtcaagctct
     4561 cgaaccgaat gcccgccaac cgctactgtc ggcggtgcag ctcaccaaac gattcgatgc
     4621 gctcgcggcc aacgacagca tcaacctcga catttttggg ggcgaaattc acgcgctgct
     4681 cggtgaaaac ggcgccggca aatcgaccct cgtgaagatc atctatgggc tgcttcggcc
     4741 gaccagcggt gaattgcgct tttcgggcc
//
LOCUS       DATILV010000469         2520 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1902502, whole genome shotgun sequence.
ACCESSION   DATILV010000469 DATILV010000000
VERSION     DATILV010000469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2520
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1902502"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            437..1036
                     /gene="pyrE"
                     /locus_tag="VLJ17_10595"
     CDS             437..1036
                     /gene="pyrE"
                     /locus_tag="VLJ17_10595"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: protein motif:HMM:TIGR00336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004588 - orotate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HSV23463.1"
                     /translation="MLQVSARKPRTALAEKHLFEKKKRLLEIIKEKSFLTAGGPFKLA
                     SGAMSDYYLDMKPTTFSPEGLNLIADIVYDMVRNDPDISSVGGLELGAVPIACAVTMR
                     SWSGRPIDGFVVRKEKKGHGTDKKIDANFEPNTTVVLLEDVTTRGGSVLEAVHAVRAR
                     GATVKQVITIVDRLEGASENLRKEGIELRPIFTTEDLRG"
     gene            1786..>2520
                     /gene="recA"
                     /locus_tag="VLJ17_10600"
     CDS             1786..>2520
                     /gene="recA"
                     /locus_tag="VLJ17_10600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012045380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HSV23464.1"
                     /translation="MAQSALRVVEGGGMDKNKALDAALAQIERAFGKGSIMRLGKGGK
                     PIEIEAVSTGSLGLDIALGIGGLPRGRVVEIYGPESSGKTTLALHCVAEAQKRGGICA
                     FIDAEHALDPIYARKLGVNIDDLLISQPDTGEQALEICDTLVRSGAVEVMVVDSVAAL
                     VPRAELEGEMGDSQPGMQARLMSQALRKLTASISRSNTMVIFINQIRMKIGVMYGSPE
                     TTTGGNALKFYASVRLDIRRIGAIKER"
BASE COUNT          548 a          740 c          753 g          479 t
ORIGIN      
        1 ccgtcaacgt cggcctcagc ctcggcgcgc atcaatttga cggcgcgcag ttcttaaggc
       61 cgcccgtgca gccttgaaga tgagtgaggc tggccacgtc agaacatcaa gccaatggac
      121 tacccaatag tggacgcgcg ggctcatcaa atacctccct gcggacaagg acattcatat
      181 tggggcactg aggcctgaat gagaacggcg cgcgccaagc cggtgttgtc ttaaatttgt
      241 ccacaggcgt cctggattgc acaagcgacg tgcgatatgc gccctcaaac gacgcgacag
      301 tgcaattttg cgtgtgcatt ggcccaaaac agccatgaca acggggcctg tgtcggttac
      361 agcgtaaacg cgaatctcca tatatgttgg ggtgttgcgg cttcgcccgc cagcgccctt
      421 aaaggagggc agacctatgc tgcaggtcag cgcacgaaag ccgcgtacgg ctcttgcgga
      481 aaagcatctt tttgaaaaga agaagcgatt gctcgaaatc atcaaagaga aatcattcct
      541 aaccgcaggc ggcccattca aattggcgtc cggcgccatg agcgactact acctcgacat
      601 gaagcccacg accttctctc cggaagggct gaatctgatc gccgacattg tctacgacat
      661 ggttcgcaac gaccctgaca ttagctctgt cgggggcctt gaactcggcg ctgtgccaat
      721 cgcttgcgcc gtgaccatgc ggagctggag tggccgcccg atcgatggat tcgtcgtgcg
      781 taaggaaaaa aagggccacg ggaccgataa aaaaatcgac gccaatttcg aaccgaatac
      841 cacggtggtc ttgttggaag atgtgaccac ccgcggcggc tccgtcttgg aggccgttca
      901 cgctgtacgc gcacggggcg ccacagtgaa acaggtcatc accatcgtgg atcggctgga
      961 aggggcctcg gagaatctgc ggaaagaagg gatcgagctt cggcctattt ttacgaccga
     1021 ggaccttcgc ggctgagaga gacttccggt ggctgggtgc tggccggatt tgacctctag
     1081 tggcctgttc tgcgatcgat ggtggccggt tttgctttat ccgaccgctg acctggaagc
     1141 cgcggtacgc gcttcgtcgg cacgttcgcg ccaataccca gggtcatcga agaatgattg
     1201 cattgtagca ccggtcaacc gatgaagccg acggggttct gtgcgtcaat ggggtaaata
     1261 cctggacctt gagtatgagc cgccaactaa gacactctac ggctccagaa cagacctcac
     1321 caatagctcg tcaattttct tcagcaactg ctgcgagcat tcgatggtcc atcggctctt
     1381 gcaaatctgc ttcgtcaact tttgacgttc gctgagaagt cgcgctattt cctcctcgcg
     1441 gaggttccgc tcattttcca tatgcgtccc ccacgttgca aagctgcagg acatcgaacg
     1501 cggataggta gtagttagtt ccaaatccgg ccgccatcag attcaaaccc ggccagcacc
     1561 ccggcgggta ctggccggaa ccggcccctc gttgaggcaa aaccggccac tacgcatccc
     1621 aaaaccggcc actaggggtc aaaccgggac agcaccccgg cgcaaaagaa catattgcga
     1681 acctagaaca aacagtgtac attcttccca cttcatcggt ggcggcggat ggcggcaaca
     1741 agggtgttgc cggtccggca attccagtca taaggagggg agagcatggc ccaaagcgcg
     1801 ctgcgtgtgg tcgaaggtgg cggaatggac aaaaacaagg cgcttgacgc cgcgctggct
     1861 cagatcgagc gcgcgttcgg caagggctcg atcatgcggc tcggcaaggg cggcaagcca
     1921 atcgagatcg aggcggtttc gacgggttcg ctcgggcttg atatcgcgct cggcatcggc
     1981 ggtctgccgc gcggccgcgt ggtggagatt tacgggccgg agtcctcagg gaaaaccacg
     2041 ctggcgctcc attgcgtcgc cgaagcccag aagcgcggcg gcatctgcgc ctttattgat
     2101 gccgagcatg cgctcgaccc gatctatgcc cgcaagctcg gcgtcaacat cgacgacctc
     2161 ctgatctcgc aacccgacac gggcgagcag gcgctggaaa tctgcgacac cttggtgcgc
     2221 tccggcgccg tcgaggtgat ggtggtcgac tcggtggcag cattggtgcc ccgcgcggag
     2281 ctcgaaggtg agatgggcga cagccagccc ggcatgcagg cgcggctgat gagccaagcg
     2341 ctgcgcaagc taaccgcttc gatcagccgc tccaacacca tggtgatctt catcaaccag
     2401 atccgcatga agatcggcgt gatgtacggc agcccggaga ccacgaccgg cggcaatgcg
     2461 ctgaaattct acgcctcggt gcgcctcgac atccgccgca tcggcgccat caaggagcgc
//
LOCUS       DATILV010000470         5588 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_882600, whole genome shotgun sequence.
ACCESSION   DATILV010000470 DATILV010000000
VERSION     DATILV010000470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5588
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_882600"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(132..2906)
                     /locus_tag="VLJ17_10605"
     CDS             complement(132..2906)
                     /locus_tag="VLJ17_10605"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF012403.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HSV23465.1"
                     /translation="MLDRPPLPPGWRTSDDHEINLRRWRGRTEILSVKAAEPDHPYFG
                     TFRAQSASGSSYDVEIRSLNALANSCGCIDYRVNGLGTCKHIEGTIEAMARGRAKSFR
                     AAKKTGSPRVEVFLDRRVSCVPAVTWPAPGPGRNFKPVRDWLGPYLTVDETLTRDPER
                     IESLVAAWESAPARIRTMLRVSRHFTPWLDRARRERQRVEARGAFEADIEAGRETLDI
                     VKHPLLPYQRQGVLHLAFGERTLLADEMGLGKTIQGIAACVLLAKLKQVERVLVVCPA
                     SLKAEWEEQIARFCDRSTRLVFGPKAQRYATYQAPAFFTIVNYEQVLGDAEEINRTLK
                     PDVIVLDEAQRIKNWQTKTARRVKSLRSPYAFVLTGTPLENRIDELYSIVQYLDPEIL
                     GPLFRFNRDFYQLDERGRPVDYQNLTDLRERLKPVLLRRRKSDVETQLPGRTVKTYFV
                     PMAEEQKLRYDDYYSPARQLIAKAQRRPLTQAEFERLQMLLACMRMVCDSPAILDPTC
                     RISPKLEELEGILGDLLEDPDRKVIVFSEWERMLTMVRELAGEMGIDAAWHTGSLPQQ
                     RRRAEINRFKHDPACRLFLSTDSGSVGLNLQVASAVINVDLPWNPAKLEQRIARAWRK
                     NQMRSVSVINLVTEDSIEHNILHLLGRKQALADGIIDGVGDLASLKMPSGRAAFVERM
                     QAMMTASPRPAARVLPPEEVLVADLIERHGEKVLLAEVRHAIGGNPKLLVVFDLDPPT
                     LAAETARLASASTVAVDVVDHATWLAMQRFAASGLLQFTHESRLLHRSLTLTEQGAAA
                     PAPDQRCGQLMAEAQRALRMGKVLASGGFPEEAPGLLVKVLLKAGAARMAERAELPAG
                     ASTATDGDIRRLVERGEFPADAYAILDAGQPSASQPAPGGIDALISTAEQILTAIGHR
                     VATEPRRRAA"
     gene            3135..4259
                     /locus_tag="VLJ17_10610"
     CDS             3135..4259
                     /locus_tag="VLJ17_10610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate dehydrogenase family
                     protein"
                     /protein_id="HSV23466.1"
                     /translation="MVDQPETSDHHSRAGATRLLVLPGDGIGPEIVAATLDVLREADR
                     MFGLNLTYETAAIGFDSLQTAGTTITDEVVVQAKCADGIILGPVSHNEYPPAAQGGLN
                     PSGELRKRLDLFANIRPARSRAGVPPRCGRDIDLVIVRENTEGFYADRSMHMGPGEFM
                     PTPDVAVAVRKITREGSERIVEAAFSLALRRRRKVTIVHKANVLRLSDGFFLECARGV
                     AARHAGVACEERLVDAMAALLIRDPGQFDVMVTTNMFGDILSDEASEIAGSLGIGASL
                     NAGHRFAVAQAQHGSAPDIAGRDLANPTSLIESVAMLLAWLEERGRGEKFAAASRRIM
                     SAVDATLTVPALRTRDLGGPLGTKAFTEQVIARLAHAEHA"
     gene            complement(4275..4997)
                     /locus_tag="VLJ17_10615"
     CDS             complement(4275..4997)
                     /locus_tag="VLJ17_10615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine amidotransferase"
                     /protein_id="HSV23467.1"
                     /translation="MTLPVLIVLHQEQSTSGRVGQYFKAHGIPLDIRRPRFGDPLPET
                     LSAHLGVVIFGGPMSANDPDDYIRAEIEWIKVPVSENKPFLGICLGAQMLARHLGATV
                     GFHPEGKAEVGYYPIRITPAGRSMMATWPEVVYQWHREGFDLPAGAELLAEGETFQVQ
                     AFRHGRAAYGIQFHAEVTHAMMCRWTTQGQERLALPGAKPRNQHFMDRPVYDLAIRTW
                     LHDFLDRWCALDRDAVTHAVTV"
     gene            complement(5083..>5588)
                     /locus_tag="VLJ17_10620"
     CDS             complement(5083..>5588)
                     /locus_tag="VLJ17_10620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSV23468.1"
                     /translation="ELEHAEQLAMIDLNVRVLAELSLAFIDSLSRHRGGILNVASVAS
                     FLPGPGMAVYYASKAFVLSFSESLHQELLDRGIRVTTLCPGVVPTEFQARAGMKKIPG
                     SGLFSTSPADVAAAGYAALMQGQRVLVPGIVNKFVTFVPRILPRGFFLRAVARSQLRQ
                     RNSSLSS"
BASE COUNT         1053 a         1690 c         1789 g         1056 t
ORIGIN      
        1 ggaccttccc gggcttgaga cgcgccgaag cgccgcgcgg aggcgccgtc aaggacggcc
       61 tcctgagcgc tcgtggtcgc gctgtttcca aggtcgtatg acacgagcct cggagcaatt
      121 ctggtgtcta tttaggccgc ccgtcggcga ggctcggtcg caacacgatg tccgattgcc
      181 gttaaaatct gctcggccgt cgaaatgagc gcatcaatgc cgcccggggc cggttggctg
      241 gcactcggct gcccggcatc caaaatggcg tacgcatccg ccggaaattc gcctcgttcc
      301 accaaacgcc ggatgtcacc gtcggtcgcg gtcgatgctc cagctggaag ttccgcccgc
      361 tccgccatcc gcgctgcgcc ggccttcagc aggaccttga cgagtagtcc gggcgcttcc
      421 tctggaaagc ccccggacgc caggacttta cccatgcgca gggcgcgttg agcctccgcc
      481 atcagttgtc cgcagcgctg gtccggcgcg ggcgcggccg caccttgttc ggtcagtgtt
      541 agggagcgat ggagaagccg cgactcgtgg gtgaattgca gcaagccgga ggctgcgaag
      601 cgttgcattg caagccaggt ggcatggtcg accacatcga cggcgacggt gcttgcggat
      661 gccaagcgcg cggtctccgc ggccagggtt ggggggtcga gatcgaagac gaccaggagc
      721 ttcgggtttc cgccgatggc gtggcgtacc tcggccaaca gaaccttttc gccgtggcgc
      781 tcgatgagat ccgccaccaa cacttcctcg ggcggaagta cccgggctgc cggacgtggg
      841 gacgccgtca tcatggcctg catgcgttcg acgaatgcgg ctcgccccga cggcatcttc
      901 agcgaggcga gatcgcccac accatcgata atgccatcgg caagcgcttg cttgcgaccg
      961 aggaggtgca gaatgttgtg ctcgatcgaa tcctcggtga cgagattgat gacgctaacc
     1021 gagcgcatct ggttcttgcg ccaggcgcgg gcgatgcgtt gttcgagctt cgctggattc
     1081 caaggcagat ccacgttgat caccgcgctg gcgacctgga ggttgagtcc gacactgccg
     1141 ctgtcggtcg acaagaacaa ccggcaagct ggatcgtgct tgaaccggtt gatctcggcc
     1201 cgccgccgtt gctgcggcaa tgagccggtg tgccatgcgg catcaatgcc catttcgccg
     1261 gcgagttcgc ggaccatggt cagcatccgc tcccactcgg agaacacaat caccttgcgg
     1321 tccgggtctt caaggagatc gcccaaaatg ccctccagct cttcgagctt ggggctgatg
     1381 cggcaggtcg ggtcgaggat agccggcgag tcgcagacca tgcgcatgca ggcgagcagc
     1441 atctgaagcc gctcgaattc cgcctgcgtc agcgggcggc gctgggcctt cgcgatcaat
     1501 tgcctggccg gcgagtaata atcgtcatag cgcagcttct gctcttcggc cattggcacg
     1561 aagtaagtct tgacagtgcg gcccggcagt tgcgtctcga cgtcggactt gcgccggcgc
     1621 agcagcaccg gttttagacg ttcgcgcaga tcggtgagat tctgatagtc gaccggccgg
     1681 ccgcgctcat cgagttggta gaagtcgcgg ttgaagcgga acagcggtcc gaggatttcg
     1741 ggatcgagat actggacgat cgaatagagt tcatcaatgc ggttttcgag cggcgttcca
     1801 gtgagcacga aggcataggg agagcgcagg gacttgacac gccgcgccgt cttggtttgc
     1861 cagttcttga tccgttgcgc ctcgtcgagc acgatgacat cgggtttgag tgtgcggttg
     1921 atttcctcgg cgtcgccgag cacctgctcg taattgacga tcgtaaagaa cgctggggcc
     1981 tggtaggtgg cgtagcgttg cgcctttggg ccgaacacga ggcgtgtgga tcggtcgcag
     2041 aaccgggcga tctgttcttc ccattcggcc ttcagggacg ccgggcaaac caccaaaacg
     2101 cgctcgacct gcttcagttt cgctagcagc acgcaagccg caatgccctg tatggttttg
     2161 cccaacccca tttcgtcggc cagaagggta cgctcgccaa atgccagatg aaggacacct
     2221 tggcgctgat agggcagcag cggatgcttg acgatatcaa gggtttcccg tccggcttcg
     2281 atatcggctt caaatgcgcc gcgcgcctcg acgcgttgcc gctcgcgtcg cgcgcgatct
     2341 agccacgggg tgaaatgccg ggacacgcgc agcatggtgc ggatgcgagc cggagccgat
     2401 tcccaagccg cgaccaagct ttcgattcgt tccgggtcgc gtgtgagtgt ttcgtccacc
     2461 gtcagatagg gaccaagcca gtcacgaacg ggcttgaagt tccggcccgg ccccggcgcc
     2521 ggccacgtaa cggcgggtac gcaagatacg cggcgatcca ggaacacttc gactcgtggg
     2581 ctgccggttt tcttggcggc acgaaagctc ttggcccggc cgcgtgccat ggcctcgatg
     2641 gttccttcga tgtgcttaca agtgccgagc ccattgacgc gataatcgat gcagccgcat
     2701 gagttggcca acgcattcaa gctgcggatt tccacgtcat aactactgcc gctggccgac
     2761 tgagcacgaa atgtgccgaa gtagggatga tccggttcgg cggccttaac gctcaggatt
     2821 tcggttcgcc cgcgccagcg tcgcaggttg atttcatggt cgtcgctggt gcgccaacct
     2881 ggcggcaagg gaggccgatc gagcacggct ttcgccttgg gtttgcccgc ggactttcga
     2941 tgaggggatt tggaagattt gggtgcgccg cgtcgggcga ggggcaatgt tcgcgtggcc
     3001 atattacgat gcagggtcga tgaatgattc gaccgaatga ttgcattaaa gtatggcaac
     3061 gcaagcgtga aatggcccat ggtccaccgc taatttgcta acgcgtggcg ctcgccgtga
     3121 cacgggaggt gacgttggta gatcaacccg aaacaagcga ccaccactcc cgcgccggcg
     3181 caacccgcct cctggtgctt ccgggcgacg gcatcgggcc ggagatcgtc gctgccaccc
     3241 tcgatgtgct gcgagaagcg gatcgcatgt ttggactcaa tctgacctat gagacagccg
     3301 cgatcggatt tgactcgctc cagaccgccg gcaccaccat tacggatgag gtcgtggtgc
     3361 aggcaaagtg tgcggacggc atcatcttgg ggccggtgtc gcataatgaa tatccgccgg
     3421 ctgcccaagg tgggctcaat ccgtcaggcg aactgcgaaa acggctagac ctgttcgcta
     3481 atatccggcc ggcgcgctca cgggccggcg tgccgccgcg ctgtgggcgc gacatcgact
     3541 tggtgatcgt tcgcgagaac accgaggggt tctatgcgga ccgctccatg cacatgggcc
     3601 ccggcgagtt catgccaacg ccggacgttg ccgtggcggt ccgcaaaatc actcgcgaag
     3661 gctccgagcg catcgtcgag gcggcgttct cgcttgcgtt gcgccggcgc cgcaaggtga
     3721 cgatcgttca caaggccaat gtgctacgtc tgtccgatgg ctttttcctc gaatgcgcgc
     3781 ggggagttgc ggcgcgacat gccggcgtcg cctgcgagga acgtctggtc gatgcgatgg
     3841 cggctctgct gatccgcgat cccggccagt tcgacgtgat ggtcaccacc aacatgttcg
     3901 gcgacatcct gtcggacgaa gcctcggaga ttgcgggtag cctcggcatc ggcgcctcgc
     3961 tcaacgccgg gcatcgtttc gcggtcgccc aggcacagca cggatcggcg cctgacatcg
     4021 cgggacgcga tctcgccaat ccgacgtcgc tgatcgagtc ggtcgcgatg ctgcttgcat
     4081 ggctagagga gcgcgggcgc ggggaaaagt tcgccgcggc cagccggcga atcatgagtg
     4141 ccgtggatgc caccctcacg gtgccggccc tccgcacccg tgacctcggc ggcccactgg
     4201 gcaccaaggc gttcactgag caagtgatcg cccgcttggc tcacgcggaa cacgcgtgac
     4261 gagggaagaa gccgctacac cgtaaccgca tgggtgaccg catcacggtc cagcgcacac
     4321 cagcgatcca aaaagtcgtg cagccaagtg cgaatggcga ggtcgtagac cggacgatcc
     4381 atgaaatgct gattgcgggg tttggctccc ggcagggcga gccgttcttg accctgcgtt
     4441 gtccagcggc acatcatcgc gtgggtgact tcagcgtgaa attgaatgcc gtaggccgcg
     4501 cgcccgtggc gaaatgcctg cacctggaag gtttcccctt cggcaagtag ctcggcaccg
     4561 gccggaagat cgaaaccctc tcggtgccat tgatagacga cctccggcca agtcgccatc
     4621 atggatcgtc cggcgggcgt gatccgtatc ggataatagc cgacctcggc tttaccctcc
     4681 gggtgaaatc cgaccgtggc gccgaggtgt cgcgccagca tttgcgcgcc aagacaaatc
     4741 cccagaaagg gcttgttctc gctgacaggt accttgatcc actcaatctc ggcgcgaata
     4801 tagtcgtcgg ggtcattggc actcatcggc ccgccgaaga tgactacgcc caaatgggcc
     4861 gacaaagttt ccggaagggg atcgccgaac cgcggccgac gaatgtccag cggaatgcca
     4921 tgcgccttaa agtattggcc cacgcggccg gaagtcgatt gctcctgatg cagcacgatc
     4981 agaacaggca gtgtcatggg gcttatagga agttcccgac tactggattg catccctaga
     5041 tacgccacaa ggtcgttagc aagcggtttg tgcgcacagc acctatgagg acagcgaaga
     5101 gttgcgctgc cttaattgcg aacgcgcaac ggcgcgaaga aaaaagccac gcgggaggat
     5161 gcgcggcacg aacgtcacga atttattgac aatgcccggt acaagcaccc tttgcccctg
     5221 catcagggcg gcatatccgg ccgccgcaac gtctgcgggc gatgtgctaa aaagccctga
     5281 tcccggaatt ttcttcatgc cagcccgcgc ctggaattcg gtcggcacca cgcccgggca
     5341 gagcgtcgtc acgcggattc ctctgtccaa cagctcctgg tgcaacgact cgctaaagga
     5401 cagcacgaac gccttggatg cataatagac ggccattccg gggccaggca gaaagctcgc
     5461 caccgatgcc acgttgagga tgccgccgcg gtggcgactg aggctgtcga tgaaggcaag
     5521 cgacaattcg gcaagaacgc ggacattgag gtcgatcatg gcaagttgct cggcgtgttc
     5581 gagctcca
//
LOCUS       DATILV010000471        14300 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_621937, whole genome shotgun sequence.
ACCESSION   DATILV010000471 DATILV010000000
VERSION     DATILV010000471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 14300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14300
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_621937"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..788)
                     /locus_tag="VLJ17_10625"
     CDS             complement(<1..788)
                     /locus_tag="VLJ17_10625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009799990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM44-like domain-containing protein"
                     /protein_id="HSV23469.1"
                     /translation="MFRTIFRAVTTAAIVAATIGFLASEADARIGGGLSSGSRGTRTF
                     SAPPPTSTMPSAAPTQRTVTQPNTAAPRPGLTPSPAGGFFGRSGFWGGLAAGFLGAGL
                     FGLLFGHGMMGGLGGFVSFLGLIFQLGLIALVAVFVWRWFQRRNEPAYAGSLYRDSSP
                     INPLGGLGFGGGQGSGSAGAGSQRSDDVGITGADYDAFERLLGEIQTAYSNEDVNALR
                     THATPEMVSYFSEDLAQNASRGVVNRVSDVKLLQGDLAEAWREGG"
     gene            1059..1823
                     /locus_tag="VLJ17_10630"
     CDS             1059..1823
                     /locus_tag="VLJ17_10630"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HSV23470.1"
                     /translation="MRQTTMTAAAVGFAMMLATNILASAAEIKVISSNALKTTLEELA
                     PAFEKATEHKLTFTWGAAVPLKAEIEKGATFDLAVLTTAAVDDLIRQGKLVGATRAAL
                     ADSGAGVAVRKGAPKPDISTVDAFKHALLNAKSVAYVEQGGTGIYLKSLLQRLNIADA
                     LKDRVKLLPPENPAARAIANGEAEIGMTQISEILPYTGAELVGPFPKEIQLTTSFAAA
                     VGANARQSEAANALVKFLTAPSAAPVFRAKGLDPAG"
     gene            complement(1851..3023)
                     /locus_tag="VLJ17_10635"
     CDS             complement(1851..3023)
                     /locus_tag="VLJ17_10635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015665068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extensin family protein"
                     /protein_id="HSV23471.1"
                     /translation="MMRAVRWRFVIASLLLGVVFGLAGCARMWFAQREPWRREAEIFC
                     LQSGAVKEGASIAIIKAIDGPGVCGADYPLRVTALGEAAAVSFADEPVRPPGTIQGAP
                     DHLRVPRAIAPPAAPPLLAYPAASPYVPSQTYVPPAATATGMPLSLAPPSRIAPLDPD
                     ASQRAPIRAPFEQVPVGRSVSAAITVRPAAVSPAATLACPLVSVLDRFISDSVQPAAA
                     RWFRQPVVEIKQISAYSCRGMNGDANARISEHAFGNALDIAAFTLADGRVITVKHGWH
                     GAPQEQGFLHDVQSAACAMFTTVLAPGSNVYHYDHMHVDLMRRSSGYVICEPTAVPGE
                     VAFARAGGRYGRGRPMETSYTGSVAAHNPEGAATGLRSDQPDARGRRLPSAVPGED"
     gene            complement(3175..3675)
                     /locus_tag="VLJ17_10640"
     CDS             complement(3175..3675)
                     /locus_tag="VLJ17_10640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HSV23472.1"
                     /translation="MTVRDLIPWNRSRNINVRRGDEVSPLLALHREMNRVFDSFFRGF
                     DLMPFGPDRFLDQGMGWPNIEVSETDKEVKVIAELPGLDEKDLGVELANGVLTISGEK
                     KSESEDRGRLFSERYYGRFERRIPVNDVEQDKVTASFKNGVLTVTMPKSPKAQEKVKR
                     IVINSR"
     gene            complement(4006..7743)
                     /gene="metH"
                     /locus_tag="VLJ17_10645"
     CDS             complement(4006..7743)
                     /gene="metH"
                     /locus_tag="VLJ17_10645"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0008705 - methionine synthase activity
                     [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HSV23473.1"
                     /translation="MKPITRTPVETELRRRADEAILVLDGAMGTEIQALKLGEAGYRG
                     TRFGDWPTDLRGNNDILILSQPDAVRQLHLNYFRAGADIVSTNTFSSTRIAQADYGTQ
                     ELVGELNSCGARLAKEAAAAATREDGRPRFVAGAIGPTNRTASISPDVSNPGFRAINF
                     DELRLAYGEQARGLLDGGADLLLIETVFDTLNAKAALYAIAELFEERGATAPVMISGT
                     ITDLSGRMLSGQTPEAFWISVRHAAPFSIGLNCALGAKEMRAHIADLARVADTLVCAY
                     PNAGLPNEFGLYDESPEFMASLLAEFAEAGLVNIVGGCCGTTPAHIRAIAEAVRGKPP
                     RKPPDEPHELRLSGLEPFRLTADIPFVNVGERTNVTGSARFRKLVTAGDYPAALAVAR
                     DQVENGAQVIDVNMDEGLLDSEHAMTTFLNLVAAEPDIARVPVMVDSSKFRVIEAGLK
                     CLQGKAVVNSISLKEGEEEFVRQARIVRRHGAAVVVMAFDEQGQADTFARKTAICRRA
                     YDILTGTVGFAPQDIIFDPNIFAVATGIEEHNGYGIAYIEATRWIRANLPGAHVSGGV
                     SNLSFAFRGNEQVREAMHSVFLYHAIAVGMDMGIVNAGQMAVYDDLDPELRQACEDVV
                     LNRRSDGADRLLAIADRFRGQKGDVKAVDLAWREWPVDKRLAHALVHGISDFIAADVE
                     TARQAAKRPLDVIEGPLMAGMNVVGDLFGSGKMFLPQVVKSARVMKQAVAYLMPYMEE
                     EKARTGDARSSSAGKIVLATVKGDVHDIGKNIVGVVLQCNNYEVIDLGVMVPAMKIIE
                     TAKAENADIIGLSGLITPSLDEMCHVAAEMERQGFETPLLIGGATTSRVHTAVKIHPN
                     YRRGQAVYVNDASRAVGVTAALLSANKRTDYIANLRTEYARIADTHARGEEQKRRLRL
                     AAARANALKLDWGANYRPTRPRVTTTALRDVPLAEFVPYIDWSPFFSTWELTGKYPAI
                     LDDDKYGAAARALFDDAKAMLERVVGENWFAARGVVGFWPANADGDDILVYADEARDR
                     PIATLHTLRQQLVRREGRANVALADFIAPRSSGIADYIGAFIVTAGVGEDEIAKRFRG
                     ANDDYSSIMVKALADRLAEAFAEHLHAKVRRELWGYAADEALTPRDLLGETYVGIRPA
                     PGYPAQPDHTEKAALFDLLNGEATTGVKLTESFAMWPGASVCGLYFSHPQSHYFGVGK
                     IERDQVEDYARRKGWRSEEAEKWLAPVLNYDPAPAAQVAAE"
     gene            complement(8006..8917)
                     /gene="metF"
                     /locus_tag="VLJ17_10650"
     CDS             complement(8006..8917)
                     /gene="metF"
                     /locus_tag="VLJ17_10650"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase [NAD(P)H]"
                     /protein_id="HSV23474.1"
                     /translation="MQPIAQPRPSRFTPQGRRVSVSFEFFPPKTEEMERTLWEAIARL
                     APLAPSFVSVTYGAGGSTRERTHATVKRIIAETLLAPAAHLTCVAADRAEVDGVIRSY
                     AAAGVRHIVALRGDPVGGVTERYAPHPQGYRNAADLVTGIKRIADIEVSVSAYPEKHP
                     DSPSVAADIDMLQAKIDAGAGRAITQFFFDNDLYFRYLDRVRARGITIPVVPGILPVQ
                     NFKQVRAFAERCGTSVPGWLADRFAGLETDAATRRLIAAAVAAEQVVDLVDRGVTDFH
                     FYTMNRADLVFAICHLLGVRACAEKAA"
     gene            complement(8917..9909)
                     /locus_tag="VLJ17_10655"
     CDS             complement(8917..9909)
                     /locus_tag="VLJ17_10655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HSV23475.1"
                     /translation="MVARISFDDLNATLRATGEETRLRILCLLADAELTVSELTEILR
                     QSQPRISRHLKLLAEAQLVERFREGSWAFFRRAEHGPAAAVVEHLVGALDPADPIVAR
                     DRERLAGVRAARVKAAQDYFRRHAAQWDRIRQLHAPDHAVEAEIRTLLLARPFRSLLD
                     LGTGTGRILELFSSEIERGLGVDLNHEMLAFARSRLDHAGIRNCSVRQGDIFDLSVPR
                     DSFDVVIIHQVLHFLDDGGRAIREAARVLRPQGRLLIVDFAPHELEFLREEYAHRRLG
                     FPPDAVAQWMEQAGLEGVVHKSVAPEPGSDGEIAVSLWLAHDPRLALADRREVA"
     gene            10045..10545
                     /gene="tsaA"
                     /locus_tag="VLJ17_10660"
     CDS             10045..10545
                     /gene="tsaA"
                     /locus_tag="VLJ17_10660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HSV23476.1"
                     /translation="MADDEFGIRVGEVAILLPEKFDSGVYFIGRISTPWSRREECPKN
                     ARQSDSVCVIEVDPRYVAALHGVESCTHLLVLYWMDKSRRDLVLQVPHHYGEPRGTFA
                     LRSPARPNPIAASVAALRQISANRLSVVGLDCLDGTPLIDIKPYFASTDSVPDAIVGW
                     HEARGR"
     gene            10676..11164
                     /gene="cynS"
                     /locus_tag="VLJ17_10665"
     CDS             10676..11164
                     /gene="cynS"
                     /locus_tag="VLJ17_10665"
                     /EC_number="4.2.1.104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008824 - cyanate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009636 - response to toxic substance
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyanase"
                     /protein_id="HSV23477.1"
                     /translation="MNRTDLTEKILDIKREKGWRWKHICEQIGGMSPMLITGALLGQM
                     KLTKPQAAKAAELFGLSNAEQAMLNEVPHRGTPMPPTDPLIYRFYELVMVNGPAWKAL
                     IEEEFGDGIMSAIDFDLQMERLPDPRGDRVKITMSGKFLPYKYYGASGNVPQYGYKEE
                     DG"
     gene            complement(11189..11788)
                     /locus_tag="VLJ17_10670"
     CDS             complement(11189..11788)
                     /locus_tag="VLJ17_10670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008130830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDYXXLXY domain-containing protein"
                     /protein_id="HSV23478.1"
                     /translation="MMNFAAAFDRVPKFVLFGAAGLIQIGLIGLMVTDRAEILRAGRD
                     VTLLTRPLDPRDFLRGDYVVLGYDISSVPAGALKDTPSAGWGTPVFVKLAPSRDGLYE
                     AVSVHPAPVDVTSPEVLIRGRVVSGANCGKELRTFCGTLQVRYGIESYFVPQGEGRKL
                     EIARNQRKLTVVAAVAPTGRAAIKRLLIDGEPVYDEPWF"
     gene            complement(11785..13038)
                     /locus_tag="VLJ17_10675"
     CDS             complement(11785..13038)
                     /locus_tag="VLJ17_10675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014439064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2157 domain-containing protein"
                     /protein_id="HSV23479.1"
                     /translation="MFERSYRQRLEVDLARWQAEGVITPAIGEALRSSLPPAAGGINI
                     SVVVGIVGGLLIAAAFLAFVAANWTEIARVLRFAILIAGIAAAYGIGAGFARAGRPVL
                     ADLAAGVGAIIFGAAIALVGQMYHLSDDFAAGMLLWAAGALAAAVLTGSRGALAVALA
                     AGSLWTGARVVDGADMPHLPFVPFWMLAAVLALAWNSRVAAHLVALAALAWWCTAATG
                     RSHDLFIIAEGAAFLFGAGLLLSHARWDSPRSFGVILSSYGAFALATMAAAFAADTSW
                     EFHIASVTPPGWAVGCGFAGSILAFTAAAVGRQPGSIFAAISIALVVVVVDGWVQPKA
                     GEPWLAYALELAAMLCLVVSGMLDGARPRAVAGWLGLAGVIASVTWAVKGSLLRRSIF
                     LAAAGAVAIALAMLLGRLLPKESRP"
     gene            complement(13092..13958)
                     /locus_tag="VLJ17_10680"
     CDS             complement(13092..13958)
                     /locus_tag="VLJ17_10680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase"
                     /protein_id="HSV23480.1"
                     /translation="MNTLEYDYLCRLLKERSGLVLSSDKQYLLESRLLPIVRRLDVGN
                     LSGLVAKLRTPGAEALIVQVVEAMTTNESFFYRDKIPFDNFNEAIMPALMAARANLRR
                     IRIWCAAASTGQEPYSLAMCLKQMSQKLNGWRIDIIATDLSREVLEKATTGAYSQFEV
                     QRGLPVQMLVKHFTQNGDIWQISPEIRAMVQFRPFNLLQDFGSLGNFDVVFCRNVLIY
                     FDQQTKIDILHRIAKLMPPDGYLVLGAAETVVGLTERFKAVTDRRGLYAPNNAVDTTP
                     AVPRLAVAAAAR"
     gene            complement(13955..>14300)
                     /locus_tag="VLJ17_10685"
     CDS             complement(13955..>14300)
                     /locus_tag="VLJ17_10685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HSV23481.1"
                     /translation="HMLVERANNVPIVTLNDGPAVNFCKPAVDPLFASASRIWGPSIL
                     AVILTGMGSDGASGAAEIVAVGGNVIAQDEATSVVWGMPGAAVNAGVCAAVLPLDQIA
                     GKIGRLFAGERG"
BASE COUNT         2908 a         4533 c         4391 g         2468 t
ORIGIN      
        1 ccgccttccc gccaagcctc ggccaaatcg ccctgaagaa gcttgacgtc ggagacgcgg
       61 ttcacgacgc cgcggctcgc attctgtgcc agatcctcgg agaagtagga gaccatttcg
      121 ggcgtcgcgt gcgtgcgcag cgcgttcacg tcttcgttgc tgtaggcggt ctgtatctca
      181 cccaataggc gctcgaaggc gtcatagtcg gcgcccgtga tgccaacatc gtcgctgcgc
      241 tggctgccgg cgccggcact acccgatcct tgaccgccgc cgaatcctag ccccccgagc
      301 gggttgatgg gcgaactatc gcgatagagc gatcccgcat acgccggctc gttgcgacgt
      361 tggaaccagc gccacacgaa cacggcaacg agcgcgatca agcctagctg gaagatgagc
      421 ccgaggaatg acacgaaacc accgagccca cccatcatgc cgtggccaaa caggaggccg
      481 aacaggccgg cgcccagaaa gcctgccgca agaccacccc agaatcctga gcggccgaag
      541 aagccacccg ccggcgaagg cgtcaaaccg ggccgcggag ctgcggtatt tggctgcgtc
      601 acagtgcgct gcgtcggcgc tgccgacggc attgtggaag tcggaggcgg cgccgaaaag
      661 gtacgggttc cccggctgcc tgagctgagg ccgccgccta tgcgcgcatc ggcctcggac
      721 gccagaaaac cgatcgtggc ggcgacaatt gcagctgtcg tcacggcacg aaaaattgtg
      781 cggaacatgg tttcctcctc gaagcggcca tgccccggat tcggagcaga gttcgaccgc
      841 gcaactcaca cacgccagca atattggtac gttttgagta attggtacgg ggtggtgcat
      901 gttgtcgcag gcgccgcgat attggcttgc gatcgtggca actcattacc agcgcctcac
      961 cggcagcgtg ctagagtgca gcgccctaca gtacacatcc gcatgatcaa aaagagctgc
     1021 gactgatggg cgcgccgatg taaacgggag aaaacgcgat gagacaaacg acgatgactg
     1081 cagccgcagt cggatttgcc atgatgctcg ccaccaacat cttggcgagc gccgccgaga
     1141 tcaaagtgat cagctcaaat gcactcaaga cgacgctaga agaacttgca ccggcattcg
     1201 agaaagccac tgagcataag ctcaccttca catggggtgc cgccgtcccg ctgaaagccg
     1261 aaatcgaaaa gggcgcaacg ttcgaccttg cggtacttac gaccgccgcc gttgatgacc
     1321 tcatccgaca gggcaagctc gtcggcgcga cccgggccgc gcttgcggat tcaggcgccg
     1381 gcgtcgcggt ccgcaagggt gcgcccaaac ccgacatcag caccgtcgac gcctttaagc
     1441 atgcgctcct gaacgccaaa tcggtcgctt atgtggaaca gggcggcacc ggtatctatc
     1501 taaagtcact gctgcagcga ctcaacatcg cagatgctct caaggacaga gtcaagctct
     1561 tgcctcccga aaatccagca gcccgcgcga tcgccaatgg cgaggctgaa atcggcatga
     1621 cccagatcag cgaaattctg ccttatacgg gtgccgaatt ggttggtcct ttcccaaagg
     1681 aaattcagct taccacttcg tttgcagcgg ccgtgggcgc gaacgcgcgg caatcggaag
     1741 ctgccaatgc gttggtcaag ttcctcaccg cgccgtcggc cgccccggta ttccgggcca
     1801 agggcctcga tccggccgga tgagatgagc ggcaatttaa ttaggacgtg ctagtcctcg
     1861 cccggcaccg cagacggcag cctgcggcct cgcgcgtcgg gctgatcgga tctcagtcca
     1921 gttgccgcac cctcaggatt gtgcgcagcg accgatcccg tataggatgt ctccatcggt
     1981 cgcccacggc cataacgccc gccagcacga gcgaatgcca cttcgcccgg gacggcagtc
     2041 ggctcgcaga tgacgtagcc gcttgaccga cgcatcaggt ccacatgcat gtgatcgtag
     2101 tgatagacat tggagcccgg cgccagcacg gtcgtgaaca tcgcacaggc ggcgctctgc
     2161 acatcgtgta agaacccctg ctcttgaggc gcgccgtgcc agccgtgctt gacggtgatc
     2221 acgcgcccgt cggcaagcgt gaaggcggca atgtccaggg cgtttccgaa ggcatgctcg
     2281 gaaatgcgtg cattggcatc gccgttcatg ccgcggcacg agtacgccga tatctgcttg
     2341 atctccacca ccggctggcg gaaccagcga gctgccgcgg gctgtaccga gtcgcttata
     2401 aaacgatcga gcactgacac cagcggacag gccagagtcg cggccggcga taccgccgct
     2461 ggccgtaccg taatggctgc actcaccgag cgcccgactg gcacttgctc gaacggcgca
     2521 cgaattggag cgcgctggct ggcatcggga tcgagcggcg caatgcgcga aggcggagcg
     2581 agcgatagcg gcataccagt cgccgtagcc gcaggtggca cataggtttg gctcggcaca
     2641 tagggtgagg cagccgggta cgccaaaagg ggcggagctg ctggcggcgc aatggcccga
     2701 ggtacacgca gatgatctgg cgcgccctgg atcgtcccag gtggtcgcac cggctcgtca
     2761 gcaaagctga ccgcggcggc ctctcccaat gccgtaacgc ggagcggata gtccgcacca
     2821 cacacaccgg ggccatcaat tgccttgata atggcgatcg aagcgccttc tttcacggcg
     2881 cccgattgca gacagaaaat ttcagcctcg cgccgccacg gctcgcgctg cgcgaaccac
     2941 atgcgagcgc agcccgccag cccgaatacc acgccaagca acagggaggc gataacaaat
     3001 cgccaacgaa ccgcgcgcat catatcgcaa caatgcgcgc gatttcgtta acggcctttc
     3061 aatgaagtgg atatggccgg ccgcaacaag cctatagcct tgccattttc gcgcggttca
     3121 atcggcagca acatggctcc cgcaaaaacc cgccgcggga gcagctactc cgatttacct
     3181 gctgttaatg acaatacgtt tcaccttctc ctgcgccttg ggcgatttcg gcatagttac
     3241 ggtcaacacg ccgttcttga acgacgccgt gactttgtcc tgctccacat cattgaccgg
     3301 gatgcgccgc tcgaagcggc cgtaataccg ctcgctgaat aggcggccgc ggtcctcgct
     3361 ttcgctcttc ttctcaccgc tgatggtgag aacaccgttc gccagttcga cgccaagatc
     3421 cttttcgtcg agtccaggca actcggcaat aaccttcact tccttgtcgg tctcgctgac
     3481 ctcgatgttc ggccatccca ttccctggtc gagaaaacga tcggggccga atggcattag
     3541 gtcaaagccg cggaaaaaac tgtcgaacac cctgttcatt tcgcgatgca acgccaggag
     3601 cggactcacc tcatcgccgc gtcgaacatt gatgttacgg ctgcggttcc aagggatcag
     3661 atctctcaca gtcatggcca tattccttcg ccaggggcgc acgggcggcg aggccgctcg
     3721 gagccctctt gcccgacccg tcgtggaccg atcaggtcgc tatcttgatt atcgttaccg
     3781 accgcaccgg atgcgatcgc aggcgctgat ccacggggtg atctttcgga tcagatcggt
     3841 caaacccctg aggcgacccg ccgccgcgtc acccgtggtt aaaagaaact tagaaaccga
     3901 cttggtcaat tcaagaggga cagccagacg tccacaaagt tgcttgcgac ccaccatctg
     3961 cggcatgcct cggcttatcc cgatgatcgg tcgcctgatc ccgctctact ccgccgccac
     4021 ctgggccgcc ggtgcgggat cgtagttgag caccggggcg agccactttt ccgcttcctc
     4081 ggatctccag cccttgcgcc gggcgtagtc ttcgacctga tcgcgctcga tcttgccgac
     4141 gccgaaatag tggctttgtg gatggctgaa ataaagcccg cacaccgagg cgcctggcca
     4201 catggcaaag ctttcggtga gctttacgcc ggttgtggcc tcgccattga gcagatcaaa
     4261 cagcgccgct ttttcggtgt ggtcgggctg cgccggataa ccgggtgccg gacggatgcc
     4321 gacatatgtc tcgcctaaga gatcgcgcgg agtgagcgcc tcgtcggccg catagcccca
     4381 cagctcacgc cgcaccttgg cgtgcaagtg ctccgcgaaa gcttcggcaa ggcgatccgc
     4441 cagggccttc accatgatgg aggagtagtc gtcgttggcg ccccgaaaac gtttagcaat
     4501 ctcgtcctcg ccgactccgg ccgtcacgat gaaagcgcct atatagtcgg caataccact
     4561 cgaccttggc gcgataaaat cagccagcgc cacgttagcg cgaccttcgc gccggaccag
     4621 ttgctggcgc aatgtgtgca gcgtcgcgat cggcctgtcg cgtgcttcat cggcgtagac
     4681 caagatgtcg tcgccatcgg cattggcggg ccagaagccc accacaccac gagccgcgaa
     4741 ccagttttca ccgacgacgc gctcgagcat cgcctttgca tcatcgaaca gcgcacgcgc
     4801 agcggcgccg tatttatcgt cgtcaaggat tgccggatac ttgccggtca actcccaggt
     4861 cgagaagaac ggcgaccagt cgatataagg cacaaattcg gcgagcggca catcccgcag
     4921 cgccgtggtg gtcacgcgcg gccgcgtcgg gcggtagttg gcgccccagt cgagcttcag
     4981 ggcattggcc cgtgcggccg ccagtctcag gcgacgtttc tgttcttcgc ctcgcgcatg
     5041 ggtatcggcg atacgggcat attcggtgcg caggttggca atgtaatccg tgcgtttgtt
     5101 ggccgatagc aaagcagccg tgacgccgac cgcgcggctt gcgtcgttga cgtagacggc
     5161 ctggccgcgc cgatagttcg ggtggatctt gactgcggtg tgcacccgac tggtggtcgc
     5221 accgccgatc aagagcggcg tctcaaagcc ctgacgctcc atttcggccg cgacatggca
     5281 catctcgtca agcgacggcg tgatcaagcc ggacaacccg atgatgtcgg cgttctcggc
     5341 cttcgcggtc tcgatgatct tcattgccgg caccatgacg ccgagatcaa tcacttcgta
     5401 attgttacat tggagcacga cgcccacgat attcttgccg atgtcgtgga catcgccttt
     5461 aacggtggcg agtacgatct tgcccgcact gctcgacctg gcatcgccgg tgcgggcctt
     5521 ctcctcctcc atatagggca tgaggtacgc gaccgcctgc ttcatcaccc gggccgactt
     5581 gacgacctgg ggaaggaaca tctttcccga gccgaacaga tccccgacca cattcatgcc
     5641 ggccatcagg gggccttcga ttacgtcgag ggggcgcttg gcagcctgac gcgccgtttc
     5701 cacgtctgcg gcgatgaaat ccgaaatgcc gtgcacgagt gcgtgggcga ggcgcttgtc
     5761 gacgggccat tcgcgccaag cgagatcgac ggccttcacg tcacccttct gcccgcgaaa
     5821 gcggtccgca atggcgagca gacgatcggc cccgtcggag cggcggttga gcaccacgtc
     5881 ctcacaggct tggcgcagtt cggggtcaag atcgtcgtac accgccatct ggccggcgtt
     5941 gacgatgccc atatccatgc cgaccgcaat cgcatgatag aggaacaccg agtgcatcgc
     6001 ttcgcgcacc tgctcattgc cgcgaaacgc aaaggagaga ttggaaacgc cgcccgatac
     6061 atgggcgccc ggcagattgg ccctgatcca acgtgtcgcc tcgatgtagg cgatcccata
     6121 gccgttgtgc tcttcgattc cggtggcaac cgcgaagatg ttggggtcga agatgatgtc
     6181 ctgcggcgca aagcccaccg tgccggtgag gatgtcatag gcgcgccggc agatcgcagt
     6241 cttgcgcgcg aaggtgtcgg cctggccctg ctcgtcaaac gccattacca ccacggcggc
     6301 gccgtggcgg cgcacgatcc gggcttgacg cacgaattcc tcctcgccct ccttgagcga
     6361 gatggagtta acgacggcct tgccctgcag gcatttcagg cccgcctcga tcaccctgaa
     6421 tttcgatgaa tcgaccatca cgggcacgcg ggcgatgtcg ggctcggcag caacgagatt
     6481 aaggaacgtc gtcattgcgt gctcggagtc gagcagcccc tcatccatat tgacgtcgat
     6541 gacctgggcg ccgttttcga cctgatcacg cgcaaccgcg agtgccgccg gataatcgcc
     6601 ggcagtgacg agtttgcgga aacgcgccga cccggtgacg ttggtgcgtt ctcccacatt
     6661 gacgaacggg atgtccgctg tgagccggaa cggctcgagc ccggagaggc gcaactcgtg
     6721 cggctcgtcg ggcggcttgc gcggcggctt gccgcgcacc gcctccgcga tggcacgaat
     6781 atgcgccggg gtggtgccgc agcagccgcc cacgatattg acgagcccgg cctcggcgaa
     6841 ttcggccagc aacgaggcca taaattcggg gctttcgtcg tagaggccga attcattggg
     6901 caggccggca ttcggataag cacaaacgag cgtgtcggcg acgcgggcga ggtcggcaat
     6961 gtgggcccgc atctccttgg ccccaagcgc acaattgagc ccgatcgaaa acggagcggc
     7021 gtggcgcact gagatccaga aggcctcagg tgtctgacca gacagcatgc gtcccgacag
     7081 gtccgtgatg gttccggaga tcatgaccgg agcggttgcc ccccgctctt cgaacaattc
     7141 cgcaatagcg taaagcgcag ccttggcgtt gagggtgtcg aacaccgttt cgatcaggag
     7201 gagatcggcg ccgccatcga gaaggccacg cgcttgctcg ccataagcca agcgcaactc
     7261 gtcgaagtta atggcgcgga agcccggatt gctgacgtcc ggcgagatcg aggcggtgcg
     7321 gttggtcgga ccgatcgcgc ccgctacgaa gcgcgggcgg ccgtcctcgc gcgtcgccgc
     7381 ggcagccgcc tctttggcga gacgcgcgcc gcagctgttg agttcgccga cgagctcctg
     7441 cgtaccgtaa tcggcctgag caatccgggt ggaggagaat gtgttggtgg aaacaatgtc
     7501 ggcgccggca cgaaagtaat tgagatgcag ctggcgcacc gcgtctggct gcgacagaat
     7561 gagaatatcg ttgttaccac gcagatcagt tggccaatcg ccaaagcgcg tgccgcggta
     7621 gccggcctcg ccgagcttga gcgcctggat ttccgtgccc atggcaccat cgagcaccag
     7681 aatggcctca tcggcgcggc ggcgtagttc ggtttcaacc ggagttcgag tgatgggttt
     7741 catgaccaag atgcccctgt cgatcggctg aaccaatgcg cgctgctcaa acggttaggc
     7801 agatgtcgat cgctgtgaaa aacggaccag tcatgcgtgc agttccgatg accacctccc
     7861 cctagaggga ggtcggccca cctcagcggg ccgggtgagg gtgacagcgc ctcctcctga
     7921 ccacagaagg gagcacccca ccccggactg ccttcggcag tccggctctc cccctttagg
     7981 ggagggttgt tcttgccgtt gacgttcacg cggccttctc cgcgcatgca cgtaccccca
     8041 acagatgaca gatcgcaaac accagatcgg cgcggttcat ggtgtagaaa tgaaaatccg
     8101 tgacgccgcg atccaccaga tccaccacct gttcggccgc gacggcggcg gcaatcaggc
     8161 gacgcgtcgc cgcatccgtt tccagcccgg cgaagcggtc ggcgagccaa cccggcacgc
     8221 tggtgccgca acgctcggcg aaagcccgca cttgcttgaa gttctgtacc ggcaaaatgc
     8281 caggcaccac cgggatggtg atgccgcggg cacgcacgcg atcgagatag cgaaaataga
     8341 ggtcgttatc gaagaagaat tgcgtgatgg cgcggccggc gccggcatcg atctttgcct
     8401 ggagcatgtc gatatcagcg gcgaccgacg ggctgtccgg atgcttctcc ggataggccg
     8461 acaccgacac ctctatgtcg gcgatgcgtt taataccggt caccagatcc gcggcgttgc
     8521 gatagccttg cggatgtggc gcatagcgtt cagtaacgcc accgaccgga tcgccccgca
     8581 acgcgacaat gtgccgaaca ccggccgccg cataggagcg gatcacacca tcgacttccg
     8641 cgcggtcggc cgcaacgcag gtcagatgcg cggcgggtgc gagcagcgtc tcagcgatga
     8701 tgcgcttgac ggtcgcgtgg gtgcgttccc gggtcgaccc accggcgccg taggtgacgg
     8761 agacaaagga cggtgcgagc ggcgcgagcc gcgcgatcgc ctcccacaag gtcctttcca
     8821 tctcctcggt tttgggcgga aagaactcaa aggagacgct cacgcggcgc ccctgtggcg
     8881 tgaagcggct ggggcgcggc tgggcgatgg gctgcatcag gcaacctcgc gtcggtcggc
     8941 gagcgcaaga cgtgggtcgt gggcgagcca aagggatacg gcgatctcac cgtcggagcc
     9001 cggttccggc gcgacgctct tgtgcaccac gccttccaga ccggcctgct ccatccattg
     9061 cgccacggcg tcgggcggaa atccgagccg gcggtgggca tattcctcac gcagaaattc
     9121 caattcgtgc ggggcaaagt cgacgatcag aagccgaccc tgggggcgca gcacccgggc
     9181 agcctcgcgg atggcgcggc cgccgtcgtc gagaaagtgc agcacctgat ggatgatgac
     9241 gacatcgaaa gaatcgcgcg gtaccgaaag gtcgaagatg tcgccctgcc ggacgctgca
     9301 gttgcggatg cccgcatggt cgagccgact gcgagcaaag gccagcatct cgtgattgag
     9361 atcgacgccg aggccgcgct cgatctcgga gctgaacagt tcaagaatac gccccgtccc
     9421 ggtgccgaga tcgagtaggg aacggaacgg gcgggcaagc agcaaggtac gaatctcggc
     9481 ttcgaccgca tggtcggggg cgtgaagttg gcggatacgg tcccactggg ctgcatgccg
     9541 gcggaaatag tcctgcgccg ccttgacccg ggccgctcgt acgccggcaa gacgttcgcg
     9601 gtcgcgtgca acgatcggat cggcggggtc gagcgcgcca accagatgct ccaccaccgc
     9661 cgccgccgga ccgtgctccg cacgacggaa aaacgcccat gagccttcgc ggaagcgctc
     9721 caccagctgg gcctccgcca acaacttgag atggcgtgaa atccgcggct gcgactggcg
     9781 caggatttcg gtgagttccg acactgtgag ttcggcgtca gccagcagac agaggatgcg
     9841 cagccgggtc tcctccccgg ttgccctgag cgtagcgttc aaatcgtcga atgagatccg
     9901 agcaaccatg gtgggatcat tcccaacgcg cgggccagag ggcagcccac cgacaacaga
     9961 tagacataaa gatatcttta tgcaacaatt atagtttgcc cctgtgggat catgccccta
    10021 cggcccaccg gattggagcg catcatggcg gacgatgagt tcggtattcg ggtaggcgag
    10081 gtcgctatcc tgttgcccga gaaattcgac tccggcgtat atttcattgg tcggatcagc
    10141 acaccctgga gccgtcggga ggaatgcccg aaaaatgcgc gccaatccga ttcggtctgc
    10201 gttatcgaag ttgacccgcg ctacgtggca gcgctccacg gggtcgagag ctgcacccat
    10261 ctgctagtgc tgtactggat ggataaatcg cggcgcgatc tcgtgctaca ggtgccacat
    10321 cactacggcg aaccgcgcgg cacatttgcg ctgcgttcgc cggcgcgtcc gaacccgatt
    10381 gcagccagcg tcgccgcgct gcggcagatt tccgctaatc ggctatcggt ggtcggtctc
    10441 gactgtctcg acggcacgcc gctcatcgac atcaagcctt attttgcctc aaccgactca
    10501 gtcccggatg caatcgtggg atggcatgag gcgcgtggac gctgacagcc gttgcgacgc
    10561 tcgtcaccga actcggtcaa ccaagtcgat tttgcgtatg tgcgccgtcg gcatatgaat
    10621 tgcatgacat ggccgtagaa caccacgcgc cacatcaaac cccagggagc ccgccgtgaa
    10681 ccgcaccgac ctgaccgaaa agatccttga tatcaagcgc gagaagggct ggaggtggaa
    10741 gcacatctgc gaacagatcg gcgggatgtc accgatgtta atcaccggcg cgctgctcgg
    10801 acaaatgaaa ttgaccaagc cgcaagccgc caaggcggct gaattgttcg gactcagtaa
    10861 cgccgaacag gcgatgctca acgaggttcc ccatcgcggc acgccgatgc cgccgaccga
    10921 cccattgatc taccggttct acgaactcgt catggtgaac ggccccgcct ggaaggcact
    10981 gatcgaggag gaattcggcg acggcattat gtcggcgatt gacttcgacc tgcaaatgga
    11041 gcgcctgcca gatccgcgtg gcgaccgcgt caagatcacc atgtcgggca aattcctgcc
    11101 gtacaaatat tacggggcga gcggcaacgt tccgcaatat ggatataagg aagaggacgg
    11161 gtgaggaacg agcatctggc gggtcgcttt aaaaccacgg ctcatcatag actggctcgc
    11221 catcgatcaa cagacgcttg atcgcggcgc gcccggtcgg tgcaacggct gcgacaaccg
    11281 tgagcttgcg ttggttgcgg gcaatttcaa gcttcctgcc ttccccctgt gggacgaaat
    11341 agctctcaat gccatagcgc acttgcaatg tgccacagaa ggtgcggagt tccttgccgc
    11401 aattggcgcc gctgacgacc cggccgcgga tcaacacttc ggggctcgtc acgtcgaccg
    11461 gggctgggtg caccgaaacc gcctcataga gaccgtcgcg gctgggcgcg agcttgacga
    11521 agaccggcgt accccatccg gctgagggcg tgtccttcaa cgctccggcc ggcacgctcg
    11581 aaatgtcgta gcccagaacc acgtagtcgc cgcgcaagaa atcgcgcgga tcgagggggc
    11641 gggtcagcaa tgtcacgtcg cggccggcgc gcaggatctc tgcgcggtcg gtgaccatca
    11701 ggccgatcaa gccgatctgg atcaatccgg ccgcgccgaa cagcacaaac ttcggaacac
    11761 gatcgaaggc agccgcgaag ttcatcatgg ccgactttcc ttcggcagga ggcgcccgag
    11821 cagcattgca agcgcgatcg caacggcgcc ggctgcagcg agaaagatcg agcggcgcag
    11881 tagcgaaccc ttcacggccc aagtgacgga tgcgatcacc ccggcaagcc caagccagcc
    11941 ggcaacggct cgcggacggg caccatcgag catgccggac acgaccaggc acagcatggc
    12001 ggcaagctcc aacgcatagg cgagccacgg ctcgccagct ttcggctgca cccatccgtc
    12061 gacgacaaca acgacaaggg cgattgagat tgcggcgaag atcgagccgg gctgacgtcc
    12121 aaccgccgcg gccgtaaacg cgaggatcga cccggcgaac ccgcatccga ccgcccagcc
    12181 cggcggggtc acagatgcga tatggaattc ccatgacgta tccgccgcga aggcggcagc
    12241 cattgtggcc agcgcgaaag ctccgtagct ggacaggata accccgaagg atcgcggcga
    12301 gtcccaccgc gcatgggaaa gcaagaggcc ggcgccgaat aaaaaagccg cgccctcggc
    12361 aatgatgaat aggtcgtgcg accggccggt ggcggccgtg caccaccagg cgagcgccgc
    12421 gagcgcaacc agatgcgcgg caacccgcga attccaagcg agcgccagaa cggcagcaag
    12481 catccagaac ggcacgaacg gaaggtgcgg catatcggcc ccatcgacaa cacgcgcgcc
    12541 ggtccacagc gagccagccg cgagcgcgac cgcgagcgcg ccgcgcgaac cggtcagcac
    12601 cgccgccgcg agcgctccag cagcccacag cagcatcccg gcggcgaagt cgtcgctgag
    12661 gtgatacatc tgtccgacca gtgcaatcgc ggcaccgaag atgatggcgc cgacaccggc
    12721 tgcgaggtcg gccagcactg gccgacccgc acgtgcaaac cccgcaccga tcccataagc
    12781 tgccgcaatt cccgcaatta ggatcgcgaa ccgcaacacg cgggcgatct cagtccaatt
    12841 ggcagccacg aaagcgagaa atgcggcagc aatcagaagg ccgcccacaa tgccaaccac
    12901 aactgaaata ttgatgccac ccgccgccgg cgggagcgag ctgcgcagcg cctcgccgat
    12961 cgcgggcgtg attacgcctt cggcctgcca gcgcgcaaga tcgacttcaa gacgctgtcg
    13021 gtagcttcgc tcgaacatta tggcggttcg ggtcggaggg aagccatctg gtgtagtggc
    13081 ttccgccccg cttaccgcgc ggcggcggcg actgcaagcc ttggcactgc gggcgtcgtg
    13141 tcaaccgcat tgttcggcgc atacaagccg cggcggtcgg tcaccgcctt gaacctctcg
    13201 gtaaggccaa ccaccgtctc ggcagccccc agaacaagat aaccgtccgg cggcatcagt
    13261 ttggcaatgc gatgcaaaat atcaatcttg gtctgttgat cgaaatagat gagcacgttg
    13321 cggcagaaca ctacatcgaa attgcccaac gatccgaagt cctgaagtag gttgaacggt
    13381 cgaaattgca ccatggcgcg aatttcgggt gaaatctgcc aaatatcgcc gttttgggtg
    13441 aaatgcttga ccaacatctg gacaggcagg ccgcgctgca cctcgaactg actataggcg
    13501 ccggtggtcg ctttctcgag cacctcgcgg gacaggtcgg tggcaatgat atcgatccgc
    13561 cagccgttga gcttttgact catctgtttg aggcacatcg cgagcgaata cggctcctgt
    13621 ccggtcgagg cggcagcgca ccagattcgg atccggcgta ggttggcgcg cgccgccatg
    13681 agcgccggca tgatggcttc gttaaagtta tcgaacggaa ttttgtcgcg gtaaaagaat
    13741 gattcgttag tggtcatagc ctcgaccact tgcacgatga gggcttcggc gcccggcgtg
    13801 cgcaatttcg cgaccagacc gctgaggttg ccgacgtcaa gcctgcgcac gatcggcaac
    13861 agccgacttt caagcagata ctgcttgtcg gacgacagca ccagtccgga acgctccttc
    13921 aggagcctgc acagatagtc gtattccagg gtgttcaacc acgttctccc gcaaagagac
    13981 gaccgatctt tccggcaatc tggtcaagcg gcagcaccgc cgcgcacact ccggcgttga
    14041 ccgccgctcc gggcatgccc cacaccacgc ttgtcgcctc atcctgggcg ataacgttgc
    14101 cgcccactgc gacgatctcg gcggcaccgc tcgcgccatc ggatcccatg ccggtcagga
    14161 taacggcgag aatggacggg ccccaaatcc gcgaggccga agcaaacagc ggatccaccg
    14221 ccggcttgca aaaattgact gccggaccat cgttgagcgt gacgatcggg acgttgttcg
    14281 cccgctcgac caacatgtgc
//
LOCUS       DATILV010000472         2066 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3182177, whole genome shotgun sequence.
ACCESSION   DATILV010000472 DATILV010000000
VERSION     DATILV010000472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2066
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3182177"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..422)
                     /locus_tag="VLJ17_10690"
     CDS             complement(<1..422)
                     /locus_tag="VLJ17_10690"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009208947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HSV23482.1"
                     /translation="MINDNLTELPKDLPVPMDDGAAAHLEGMSLAQIALPSTDGGTVE
                     LASLTGRFVIYIYPMTGRPGVSLPDGWDAIPGARGCTPQSCNFRDHHLELSGLGVGVF
                     GLSTQDTEYQREVRDRLHLPFQLLSDPSLQLKSALRLPT"
     gene            727..1710
                     /locus_tag="VLJ17_10695"
     CDS             727..1710
                     /locus_tag="VLJ17_10695"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: protein motif:HMM:NF015047.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016703 - oxidoreductase activity, acting
                     on single donors with incorporation of molecular oxygen,
                     incorporation of one atom of oxygen (internal
                     monooxygenases or internal mixed function oxidases)
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HSV23483.1"
                     /translation="MIHTRICDLLGIVHPIVLGGMGTATTAPLVAAVSNAGGFGTLGT
                     SAFNAATLDTEVAAILERTEKPFGINHLLFQIQEDMFAVTLRARPAIVAFAWARKDQD
                     LRDYFRRAHDVGCKVMYSAGEVPEAIRAAEAGADVLVAQGTEAGGHVVWMASLPLVPM
                     MVKSVAPLPVLSAGGIADGRGLAAALALGAEGVLLGTRFMATPEAPIHPNFKQAIVKS
                     DGHDTVLTEIPDLASQRVWPGAMSRAQRNKFIERWSGREWVLRQSAQEVGKQVAAARA
                     AGDVDNASLSFGQDAGLIDSIKSVREVVQDIVTEAEQIITGRLASLVRQGQ"
BASE COUNT          449 a          577 c          606 g          434 t
ORIGIN      
        1 gtcggaaggc gcaaagcgct ctttaactgt agcgaagggt cgctgagtaa ttgaaacggc
       61 agatgcaaac ggtcgcggac ctctcgttgg tattcggtgt cctgagtgct gagcccaaat
      121 acaccgacgc cgaggccgct cagttctaga tgatggtcgc gaaagttaca ggactggggc
      181 gtgcatccgc gcgcaccggg gatcgcgtcc cagccgtccg gcaatgaaac tcctggccgc
      241 cctgtcatcg gataaatgta gatcacgaac cgccctgtta gcgaggctag ttcgacggtc
      301 ccgccgtccg tcgatggaag cgcaatctgc gcaaggctca tgccctccaa gtgggcggca
      361 gctccgtcgt ccatgggaac aggcaggtct tttggcagtt cggtcaggtt atcgtttatc
      421 attgaatcac tcccgcgagt ggctggattg aatatttgca acccgaagtt caggcgtttt
      481 caaatgcaca ttcaagactc tgttaagata acttgaaaac tacactgcaa taacttcgca
      541 gtttcgtcaa tccacgcttc acaagactga ttttcgaatc gtttaaggaa ttttctccgt
      601 gggactctaa cccctctttg gaaaagatgg ggtaggattt ctttcgcttg cagagacttc
      661 tctgatttac agtgcggttc gtttgggcta gtagactggc gtagaggtac gctaaaagga
      721 ggcgcgatga tacatacgcg gatttgcgat ctgctcggca tcgttcatcc cattgtcttg
      781 ggaggcatgg gcacagcgac cactgcaccg ttagtagccg ccgtatccaa cgccggcggc
      841 ttcgggactc tcggcacttc agcattcaac gccgcgacgc ttgataccga agtcgctgcg
      901 atccttgagc gaaccgaaaa accgttcggc atcaaccatc tgttatttca aatccaagag
      961 gatatgttcg ctgtgacgtt gcgcgctcga ccggcgatcg tagcctttgc atgggcgcgc
     1021 aaagatcagg acttgcggga ctattttcgg cgcgcccacg acgttggctg caaggtcatg
     1081 tacagcgccg gggaagttcc tgaagcgatc cgcgccgcgg aagccggagc tgacgtcctc
     1141 gtggcgcaag gtacggaagc cggaggccac gtcgtttgga tggcatcgct gccgctggtg
     1201 ccgatgatgg tcaaatccgt agcgccgttg ccggttctct ccgcgggcgg tatcgccgac
     1261 ggccgcggcc tggcggcggc gctggcttta ggagccgaag gcgtgctgct cggtacccgt
     1321 ttcatggcca ctccggaagc gccgattcat ccaaacttta agcaagcgat cgttaaaagc
     1381 gacggccacg ataccgtgct gaccgagatt cccgatcttg ccagccaacg cgtctggccg
     1441 ggcgcgatgt cacgggcaca gcgcaacaag ttcatcgaac gctggtcggg gcgcgaatgg
     1501 gtgctgcgtc aaagcgcgca agaggtcggt aagcaagtcg cggccgcgcg agccgccggc
     1561 gatgtcgaca acgcctcgct ctcattcggt caagatgccg gcttgatcga ttcgatcaaa
     1621 agcgtcaggg aagtggtcca agacatagtc acggaggcag aacaaatcat cacaggccgt
     1681 ttggcgagtc ttgtgcggca aggtcaataa tagcgcgacc cggaatcttg gaacggaata
     1741 tcgctacagg agcagtgctc ggacagccga tttattgttg gtaggtgaaa ttccactcga
     1801 gcgagcagtg gccggagaag ctcaaataca tagtcgaaga tccgactccg acacgtattt
     1861 tcattgcgca gcaaagcatt gattgggtac cgaggccgtc gaaagtggcg gtcgtcggtc
     1921 ggctcatatt cagctctctc ggtgcccgct ctcacgcaat taagcaacac gcctggaatc
     1981 agctgccacc ggcggcgccc tgtgcgccaa gagccgatca atcgaaagcg cccccgcccc
     2041 tttgaccaaa accgccaacc cgagcg
//
LOCUS       DATILV010000473         2242 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2669943, whole genome shotgun sequence.
ACCESSION   DATILV010000473 DATILV010000000
VERSION     DATILV010000473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2242
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2669943"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..381)
                     /locus_tag="VLJ17_10700"
     CDS             complement(<1..381)
                     /locus_tag="VLJ17_10700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HSV23484.1"
                     /translation="MMQRRTFLAGTALAATATAFKSANAELLPLGDLPNWRYPDPRVE
                     ALDKRFKARVGNAAIERVATGFRWAEGPVYFRDGGYLLWSDIPNNRIMRWLEDDGHVS
                     VFRANSNYSNGNTRDREGRLITCEH"
     gene            790..1080
                     /locus_tag="VLJ17_10705"
     CDS             790..1080
                     /locus_tag="VLJ17_10705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008134461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046914 - transition metal ion binding
                     [Evidence IEA];
                     GO_process: GO:0006811 - monoatomic ion transport
                     [Evidence IEA];
                     GO_process: GO:0055072 - obsolete iron ion homeostasis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FeoA family protein"
                     /protein_id="HSV23485.1"
                     /translation="MTDPAPPTATCVRLGQAHRGFCGRINAIHVHENAHGLAAPEIES
                     RLLELGFVEGAEIKVLHEGPIGRDPIAVRINDTTIALRRREAMAILVTSSNT"
     gene            1083..>2242
                     /locus_tag="VLJ17_10710"
     CDS             1083..>2242
                     /locus_tag="VLJ17_10710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015665152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0015093 - ferrous iron transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transporter B"
                     /protein_id="HSV23486.1"
                     /translation="MQTDISIRHFALVGTPNSGKTALFNALTGSRQKVANYPGVTVER
                     KAGILRTPSGHNVHLIDLPGTYSLRGRSPDEEITRDVVLGRLTSETAPDLLLCIADAT
                     NLRVALRLVIELKRVGRRLMLVLNMIDIARRRGIDIDLDRLSAELGVPVVTSTAVRRG
                     GTEELLRRMDEMAAGGLDPSGENTWEPPTAGELRAAQREADRIIAIAVGRPARPDTTS
                     ARVDAVLLHPVAGLCILLCILFVMFQAVFAWAKPVMDLISSGFDALGLAVHDVLPTGL
                     LQSFIQNGVIAGVGSVIVFLPQILILFLFILLLEDLGYMGRAAFLMDRIMGGAGLHGR
                     AFIPLLSSFACAIPGIMATRVIDNRRDRLTTILVAPLMTCSARIPVYTLIISA"
BASE COUNT          430 a          655 c          673 g          484 t
ORIGIN      
        1 gtgctcgcag gtgataagcc gaccctcgcg gtcgcgcgta ttgccgttcg aatagttgga
       61 gttggcgcgg aaaacgctga catggccgtc gtcttcaagc cagcgcatga tgcgattgtt
      121 cggaatgtcg ctccatagca aataaccgcc gtcgcggaaa taaactggcc cctcggccca
      181 acggaatccc gtggccacac gctcaatcgc cgcattgccg acccgggctt tgaaccgctt
      241 gtcaagcgcc tcgacccgcg gatcgggata gcgccaattg gggagatcgc ccaatggcaa
      301 aagctccgcg tttgccgatt tgaatgctgt cgcagtggca gccagagccg ttccggctag
      361 gaacgttcgt cgttgcatca tgatttcctc ccgagtggcc ggattcgttg acccagacaa
      421 gccgtcgaac ggcacgccac cgcattatcg tctttggccg tcgagcaagc cttccccctg
      481 gaagcgaccg cgacgcattc agtgttgcgg agcaaaaaag agagataccc gataggacgc
      541 ccctgccggc catcgggctg cccaatcggg aacgacctgc actactacct taaatcgtgg
      601 cagaggagtt tgacgaagat gcgactgggt cacggcgatc gcatagcggt attgcgccag
      661 ccctgcccgg atacgcggct catttacaat cattctaagc tgctgaactt gttatcgctt
      721 cgagcttgac gatggcgtgc aactaccgca catgacacga agccgcttac catgcggaaa
      781 gtcgtaaaca tgaccgatcc tgccccgcca actgcgacct gtgtgcgctt aggtcaagcg
      841 catcgcggat tctgcgggcg catcaacgcg atccatgttc atgaaaatgc acacggtttg
      901 gcggcgcccg aaatcgagag ccgtttgctc gaattgggat tcgtcgaggg tgccgaaatc
      961 aaggtacttc atgaagggcc tattggccgt gatcccatag cggtacgtat taatgacacc
     1021 acgatcgcgc tgcggcggcg cgaggcgatg gcgatcctgg tgacttcatc aaacacatga
     1081 gcatgcagac cgacatcagc attcggcact tcgcgctcgt cggcacgccg aacagcggca
     1141 agaccgcgtt gttcaacgct cttactggca gccggcagaa agtcgcgaac tatcctggtg
     1201 ttacggtcga gcgcaaagcc ggaatattgc ggacaccgtc cggccataat gtccatttga
     1261 tcgacctccc cggtacctat tcattgcggg gacgcagccc cgatgaggag atcacgcgcg
     1321 acgtggtgct cggtcggctt accagcgaaa ccgcccctga tcttctgctt tgcatagcgg
     1381 atgcgaccaa tttgcgcgta gccttgcggc tggtgattga gctcaagcgg gtcggccggc
     1441 ggcttatgct tgtattgaat atgatcgaca ttgcgcgccg gcgcggcatc gacatcgatc
     1501 tcgaccgatt gtcagccgaa ttgggagtgc cggtcgtcac ctccacggcg gtgcgccgtg
     1561 gcggcaccga ggaattgctg cgccgcatgg acgagatggc cgcgggtggg ttggacccgt
     1621 cgggcgaaaa cacctgggaa ccgccgaccg ccggcgaact gcgtgctgct cagcgagagg
     1681 cggaccggat catcgccatt gcggtgggta ggccggcgcg acccgatacg accagtgcgc
     1741 gggtggacgc cgtgctcctc catccggtcg cgggtttgtg tattctttta tgcatcctgt
     1801 tcgtgatgtt tcaggcggtg ttcgcctggg caaaaccggt catggacctt atttcgtccg
     1861 gcttcgacgc gctgggctta gcagtgcacg acgtattgcc cacaggtttg ctgcagagct
     1921 tcattcagaa cggcgttatc gccggtgtcg gcagcgtgat cgtcttcctg ccgcagatcc
     1981 tgatcttgtt tctgttcatc ctgctgctag aagatctcgg ttatatggga cgcgcggcgt
     2041 tcctgatgga tcgcatcatg gggggcgcgg gtctgcacgg ccgtgcattc ataccgctgc
     2101 tttcgagttt tgcctgcgcc attccgggca ttatggcgac gcgggtcatc gacaaccgac
     2161 gtgatcgatt gaccacgatt ttggttgctc cgctgatgac gtgttcggct cggattccgg
     2221 tctatacgct gatcatttcg gc
//
LOCUS       DATILV010000474         6932 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1903874, whole genome shotgun sequence.
ACCESSION   DATILV010000474 DATILV010000000
VERSION     DATILV010000474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6932)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6932)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6932
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1903874"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..186)
                     /locus_tag="VLJ17_10715"
     CDS             complement(<1..186)
                     /locus_tag="VLJ17_10715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23487.1"
                     /translation="MPRSYPLTHRVDQWGARRSAATWGFDWLRAAGEPTGASPIRNGL
                     QRVMLGIDAGEADIVRGG"
     gene            313..636
                     /locus_tag="VLJ17_10720"
     CDS             313..636
                     /locus_tag="VLJ17_10720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23488.1"
                     /translation="MDNIEKKYAANVVGGMFATLQRHHSQLPSAKLGAIIISPTPPNG
                     NVHGHVGIVGQNPGGGVDNTQIFSNSSRDKKFEQNRTIKSWLAHYSGELNLPVLFFEL
                     NRDRF"
     gene            930..1961
                     /locus_tag="VLJ17_10725"
     CDS             930..1961
                     /locus_tag="VLJ17_10725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016846214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSV23489.1"
                     /translation="MTSNTSIARRDMILAAGAGFATSLLSGVAAQTQTPAAAQTGGEF
                     WTAEYTAKKGDVSLQIYRKRVGAPAPGGAAKPVLFLVHGSSNAALSSYDLTVPGKGEY
                     SMMNVYARLGYDVWTMDHEGYGKSSRTSGNSDIASGVEDLKAATPIVAKETGRNKFHF
                     YGTSSGGIRAAAFAQAQPDRVDRLVLAAFTYKGENAPTLQQRAKQLEYYKTHNTRLRD
                     RAMIRSIFTRDGLPSAYDPAVAETLADFELQFGDQVPTGTYLDMTSKLPLVDPTKVLC
                     PVLMLRGDHDGISTNADLLDFYGQLPNGDRQFVILPNVAHSIGYSNNRHMANHVMQAF
                     LTMPPQVAS"
     gene            2255..3052
                     /locus_tag="VLJ17_10730"
     CDS             2255..3052
                     /locus_tag="VLJ17_10730"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV23490.1"
                     /translation="MHIHATDGATPAGSIRIAVIDDHPIFREGTVGVLSGADGMEVIA
                     QGATATDAVAIARERTPDVILLDLYLPGGGVVAAASISRDYPRVRVVALTASEDEEDV
                     ASALRAGARGYVLKGSSGFEVVEIVRAIVRGETYVAPGLAARLLIKKGKWIEAIVDDR
                     ARDLNSPEESVLALVSRGMSNKEIARTLKCSERTVKHHMTNIMKKLDVRNRVQAALKF
                     HGTSENLSQPQSNIFARGIRATVPPLSSSQSFMTNAVPSRRERLSYK"
     gene            complement(3043..3933)
                     /locus_tag="VLJ17_10735"
     CDS             complement(3043..3933)
                     /locus_tag="VLJ17_10735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV23491.1"
                     /translation="MFEHFIRREIATSGARIVTVYGGSGPPLLLMHGNPFTHASWHKF
                     APRLAEEFTVVCTDLRGYGDSEKPPGGDDHAGYSFRAMAQDQVEVMAALGFDRFMAAG
                     HDRGARVLHRMALDHPDKVARAAILDIIPQHHLFNHMTREWGKASYHWFFMIQPFDLP
                     ERLMGADPDFFISRKLAKTEKGLSFFGHEALAEYMRCFRNPATIHAMCEDYRATFGID
                     FDMDTIDFATGRRIECPVLLLWGATGAVGRNHKPAEVWRHYATDVRDAVALPCGHYLS
                     EEAPEETYRALRAFFAAGYL"
     gene            complement(3963..4943)
                     /locus_tag="VLJ17_10740"
     CDS             complement(3963..4943)
                     /locus_tag="VLJ17_10740"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSV23492.1"
                     /translation="MRNSLTPITAVAIGLAALTAALAQTYPSRPITMIIPFAAGGPTD
                     VLGRLVGQRMGEALGQQIIIENVGGAGGMTGGLRVAQAAPDGYNIVLGTVGTHAQNQT
                     LYKRPLYNAANDFTPVALIAEVPTVLIVRKDLPVSNLKEFVDYAKKNQDKMSYGSAGT
                     GSATHLACVVMDAVMGTHITHVPYRGTGPAMGDLQAGRIDYLCDIVTTAKAQIDGGTV
                     KAIALMNKTRSPALPDVPTSVEQGMANAEAYTWNAIFLPKNAPDAIVKKVNDATLQAM
                     HTPMVKERLEGLGAQIVSDDRATPAYLGNFVKSEIEKWAGPIKASGATAD"
     gene            5121..>6932
                     /locus_tag="VLJ17_10745"
     CDS             5121..>6932
                     /locus_tag="VLJ17_10745"
                     /inference="COORDINATES: protein motif:HMM:NF013086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSV23493.1"
                     /translation="MAKKRDNGRKEPKLQEQKALSRRDFFTSGAAAGVGAAVLSEPGK
                     ALAQGASSSPQGIEWNYEADVVVLGSGCVGLHAAVRARDLGASVLVIEQNFDVGGKLV
                     HSGGWTSLGGGDAIQQRDRAAADPEGLGLTAPRIKPENLEDDPDRLFRDMTDWSVVDA
                     TAVARYRYNDRELHRAWADNAPKTRQFMMDNYVRFARIDGTHQGGGMSRGRAARAMMK
                     LADKTDIKAGTISPQDRGDPAGERHSPFNPMRTFPGGSGDTVGAPGWVWGGFAIARSL
                     EFSAREKGVRFMLNRHMDELIREQPFSGRVLGVKARYTPRMHPETGVRLESFWQNGNV
                     DERVDTIYIRARKAVIVATGGMHGNVHLRTMIDPRMVEPSIEYGPSSLIGPLNMDGSG
                     IIAGMKIGANLAGMMQNYQHSLASPTISSVLGTRDAVASIFPGHPAFLFARAKGVAIG
                     AAGWEHAIAVNQVGQRFYNERDIANVSSDAQYPPGSEGTRTPFVPLDWRNASAAQVKV
                     QYKRSAASDAALAMNEGSRAPDYASGPVWAIFDSAAAARGGWQLRYPYVADPPDGYFH
                     KADTLAELAKKVTGHPYQKMPLKHLEETVARYNAFADK"
BASE COUNT         1442 a         2069 c         2124 g         1297 t
ORIGIN      
        1 gccgccgcgc acgatgtcgg cttcgccggc atcaatacct agcatcaccc gctgcaagcc
       61 attcctgatc ggcgatgccc ccgtcggctc cccggccgct cggagccaat caaagcccca
      121 cgtcgcggcc gaacgcctcg ccccccactg atccacccga tgcgtcaaag gatatgaacg
      181 cggcacgctg tcgcctcaag cggcgcagac aaagcgcgat tatcccccga atttcatgaa
      241 tggaaaaact ggttagcgat cgctcgctcg acgatatcga tcgatatgac agagaagcaa
      301 taattgtgtt ccttggacaa catcgaaaaa aaatatgcgg ctaacgtggt cggcggcatg
      361 tttgccactc ttcaaaggca ccacagccaa cttccatctg ccaagcttgg cgcgattatc
      421 atctctccga ctcctccgaa cggaaatgtc catggacatg ttgggattgt cgggcagaat
      481 ccgggcggcg gcgtcgataa tacgcaaatc ttttcgaaca gctcacgaga caaaaaattc
      541 gagcagaatc gcaccatcaa gagttggcta gcgcactatt cgggagaatt gaatctccca
      601 gtcttgttct tcgaattgaa tcgagatcgg ttttgatcac gcgccaatta cgtttgccgc
      661 aggggcacgc ccccgcggcc gcccctgcaa catcacgttg atgctacacc aacgtgtaag
      721 gttggatcgt gtcgtcgctg cgctcaatgg tcggaacaaa gtccgacagt gccttcgccc
      781 cgcccttacg ttgtcggcct cgatcactct ttcgaagtcg ggcaggttat cggctttcca
      841 ccccgctgcc cccgcgcgtc ccgatctgct aaaatccctc cgctcaaatt ccgtccgccg
      901 cggatggcgg cccaaccggg gaggaaccga tgacttctaa cacctcaatc gcgcgccgcg
      961 acatgatcct ggcagccggc gctggcttcg ccacgagcct tctgtcgggc gttgctgccc
     1021 aaacccagac gcctgccgct gcccagaccg gcggcgaatt ctggaccgcc gaatacaccg
     1081 ccaagaaggg tgacgtgtcg ctgcagattt accgcaagcg ggttggcgcg cctgcgcccg
     1141 gcggggccgc gaagccggtg ctgtttctgg tacacggatc gtccaacgcg gcgctgtcga
     1201 gctacgacct tacggttccg ggcaagggcg agtactcgat gatgaacgtt tatgccaggc
     1261 tcggctacga tgtttggacc atggaccacg agggatacgg caagtcatca cgcacgtccg
     1321 gtaattccga catcgcaagc ggtgtcgagg acctcaaggc cgccacgccg atcgtcgcca
     1381 aagaaacggg gcggaacaag ttccacttct acggcacctc ttcgggcggc atccgggccg
     1441 ctgcctttgc gcaggcgcag cccgatcgcg tcgaccgtct ggtgctggcc gccttcacgt
     1501 ataagggcga gaatgctccg acgctgcagc agcgggccaa acagcttgaa tactacaaga
     1561 cgcacaacac gcgcctgcgt gaccgcgcta tgatccgttc gatctttacc cgcgacgggc
     1621 tgccatcggc ctacgatccc gccgtggcag aaacgctcgc cgacttcgag ctgcaatttg
     1681 gcgaccaggt gccaacaggc acatacctgg acatgacctc gaaactgccg ttggtcgatc
     1741 ccaccaaggt gctatgcccg gtgttgatgc tgcgcggtga ccatgacggc atctcgacca
     1801 atgcagacct gctggacttc tacgggcaac tccccaatgg cgaccgccag ttcgtgatcc
     1861 tgcccaacgt cgcccacagc atcggatact ccaacaaccg gcacatggcg aaccacgtga
     1921 tgcaagcgtt ccttaccatg ccaccgcagg tcgcttcata gcacgattgg tcacgttgga
     1981 ggcgcttccg acgtgaccaa tggcgatgcc gggatgccgc gcgtcggcgg catgtctggt
     2041 caccgtcggg caagggctca aattcgcgga cgagtctctc aagaacatga agttgcattg
     2101 gaaccgacaa catctgagcg tgttggtacc ggccgggcag atgcagaacg cgcggcccgg
     2161 cacgggctgc ggccgcagtg gttcgcgtta ttcagaccga gcgtggaaca gccggaaagt
     2221 ccaaggggaa ccacaaagtc caaggggaac cacaatgcac attcacgcga cggatggcgc
     2281 aacgccagcc ggttcgattc gaatcgcggt catcgatgac catccgatat ttcgcgaagg
     2341 taccgtcgga gtactcagcg gcgcggatgg aatggaggtt atagcgcagg gtgcgacagc
     2401 gaccgatgca gtggcgatcg cacgggaacg cactccggac gtcatactgc tcgatctcta
     2461 tttgccggga ggcggcgttg tagcggccgc gagcatttcc cgcgattatc caagggtgcg
     2521 ggtcgtcgct ctgacggcct cggaagacga agaggatgtc gcttcggcct tgcgggcggg
     2581 tgcacggggt tacgtcttga agggcagcag cggatttgag gtggttgaga tagtgcgggc
     2641 gatcgttcgc ggcgaaacct atgtggcgcc gggtctcgca gcacgcttgc tgatcaaaaa
     2701 aggcaagtgg atcgaagcaa tcgtcgacga tcgtgcgcgc gatctcaatt ctcctgagga
     2761 gagtgtgttg gcgcttgtat cgcgaggcat gtccaataaa gagattgcgc gaaccctcaa
     2821 atgctccgag cgaaccgtaa aacatcacat gacgaacatc atgaagaagc ttgacgttcg
     2881 aaaccgcgtc caggccgcgt tgaagtttca cgggactagc gaaaacctta gccaacccca
     2941 gtcaaatatt ttcgcgcgcg gcattcgtgc caccgtgcct cctttgagta gttcacaatc
     3001 gttcatgaca aacgcggtgc cttcgcggag ggagcgcttg agctacaagt agcctgccgc
     3061 aaagaaagcg cgcagcgcgc gataggtttc ctcaggtgcc tcttctgaaa gatagtggcc
     3121 gcacggcagc gcgacggcgt cgcgaacgtc ggtcgcgtag tgtcgccaca cctcggcggg
     3181 cttgtggttc cgtccgacgg cgccggtcgc cccccatagc agcaagaccg ggcactcgat
     3241 cctgcgtccg gtagcgaaat cgattgtgtc catgtcaaag tcgatcccga aagtggcgcg
     3301 atagtcctca cacatggcat gaatcgtggc cgggttgcgg aagcagcgca tgtactcggc
     3361 caaagcctcg tggccgaaaa agctcagccc tttttcggtc ttggcgagtt tgcgagagat
     3421 gaaaaagtcc gggtccgcgc ccatcaagcg ctcgggcaga tcaaacggct ggatcatgaa
     3481 gaaccagtgg taggaggcct tgccccattc ccgcgtcata tggttgaaca aatggtgctg
     3541 cgggatgatg tctaggatag cggcgcgcgc gaccttgtcg ggatgatcga gcgccatgcg
     3601 atggagcacg cgcgcgccgc gatcatggcc ggcggccatg aagcgatcga agcccagcgc
     3661 cgccatgacc tcgacctggt cctgtgccat ggcgcggaat gaataacccg catggtcgtc
     3721 gccgcccggc ggcttttccg aatcgccgta gccgcgcagg tcggtgcaca ccaccgtgaa
     3781 ttcctcggca agccgcgggg cgaatttgtg ccagctcgca tgggtgaacg gattgccgtg
     3841 catcagcagg agcggcggac cgctgccgcc ataaaccgta acgatgcggg caccgctggt
     3901 cgcaatctcg cggcggatga aatgttcaaa catgcgagca tttccgaaga ccgggagggt
     3961 gctcaatccg cggtcgcccc gctggccttg atcggcccgg cccatttttc gatttcgctt
     4021 ttcacgaaat ttccgagata agccggcgtg gcacggtcat cggaaacgat ttgagcacca
     4081 agcccttcga ggcgctcctt gaccatcggc gtgtgcatgg cctgcagcgt tgcatcattc
     4141 actttcttga cgattgcgtc tggtgcgttc ttgggcagga agatcgcatt ccacgtatag
     4201 gcttcggcgt tagccatgcc ttgctccacg ctggtcggca cgtcggggag cgcgggcgaa
     4261 cgcgtcttgt tcatcaaagc gattgcctta acggtgccac catcgatctg cgccttggcg
     4321 gtggtaacaa tgtcgcaaag atagtcgatg cgcccggctt gaagatcgcc catcgctgga
     4381 ccggtgccgc gatatggaac atgcgtgatg tgggtgccca tgacagcatc catcacgaca
     4441 caagcgagat gtgtggctga gccggtaccg gccgagccgt agctcatctt atcctggttc
     4501 ttcttggcgt aatcgacgaa ttccttgagg ttgctgaccg gcagatcctt gcgcacgatc
     4561 agcaccgtcg ggacctcggc gatcagcgcc accggggtga agtcgttcgc cgcattatag
     4621 agcggcctct tgtagagggt ctggttctgg gcgtgggtgc ccacggtgcc gagaactatg
     4681 ttgtagccgt caggcgccgc ctgggcgacg cgcagccccc ccgtcatccc gccggccccg
     4741 ccgacattct ctatgatgat ctgctgcccc agcgcttctc ccatgcgttg cccgacgagg
     4801 cgccccagca cgtcagtagg gccgccggcc gcgaacggga tgatcatggt gataggtcgg
     4861 cttgggtagg tctgggccaa tgccgccgtc aaagccgcaa ggccaattgc gaccgcagtg
     4921 atcggggtga gcgaattgcg catattttcc tccacgtttg cgcgcaccat cgggcaagcg
     4981 ggggtggcag gtcaagacgt agcctgctgt cgaaagtttg cgggacattc ttgggccgta
     5041 acattggtgt aaaattcgac ataaaggcag accccggcga ccttgagcag gccggcggca
     5101 gacctcaggg agggacccaa atggccaaga agcgcgacaa cgggcggaaa gaaccgaagc
     5161 tgcaggaaca gaaagctctt agcaggcgag atttctttac cagcggagcc gccgcagggg
     5221 tcggtgcggc cgttctgtca gagccaggca aggcgctggc gcaaggagcc tcgtctagtc
     5281 ctcaaggcat tgaatggaac tatgaagcgg atgtggttgt ccttgggtcg gggtgcgtcg
     5341 gcctgcatgc cgctgtcagg gcacgggacc tcggggcgtc cgtgctcgtg atcgagcaga
     5401 acttcgatgt tggcggcaag ctcgtacaca gcggcggctg gacgtcgctt ggcggcggcg
     5461 acgccataca gcaaagggac cgagcagcgg ctgatccaga agggttgggg ttaactgccc
     5521 ctcggattaa gccggaaaat ctggaagatg atccggaccg cctcttcagg gacatgaccg
     5581 actggtcggt cgtcgacgcc acggccgtgg ccagatatcg ctacaacgac cgcgagcttc
     5641 atcgtgcctg ggccgacaac gctcccaaga ccagacaatt catgatggac aattacgtcc
     5701 gcttcgcgcg gattgacggc acccaccagg gcggtgggat gtctcgcggc agggccgcca
     5761 gagccatgat gaagctcgcc gacaagaccg acataaaagc cggaacgata tcaccacagg
     5821 acagaggaga tcctgcgggg gagcgacatt cgcccttcaa tccaatgcgg acctttccgg
     5881 ggggatcggg agacacggtt ggcgcaccag gctgggtttg gggcggtttt gcgatcgcaa
     5941 ggtcccttga gttcagcgca agggagaagg gcgtccggtt catgctcaac cgtcatatgg
     6001 atgagttgat ccgagaacag ccgttctcag gcagagtatt gggagtcaaa gcccgctaca
     6061 ctccgagaat gcatcccgaa accggcgtgc gattggaaag cttctggcaa aatggcaacg
     6121 tcgatgagcg cgtcgacacg atttacatcc gggcgcgcaa ggccgtgatc gtcgccaccg
     6181 gaggtatgca tggcaacgtg cacctgcgga ccatgatcga tccgaggatg gtcgagccgt
     6241 cgatcgagta tgggccgagc tccctgatcg ggcctctcaa catggacggc agtgggatta
     6301 tcgccggcat gaaaatcggc gcgaaccttg ctggcatgat gcaaaactac caacactcat
     6361 tggcctctcc cacgatcagc agcgtgctcg gcacacgcga tgcggtggcc agcatcttcc
     6421 ccggacaccc cgcgttcctg ttcgcacgtg ccaagggcgt cgcgatcggg gccgctgggt
     6481 gggaacatgc gatcgccgtg aaccaggtgg gacagcggtt ctataatgag cgagatattg
     6541 cgaacgtctc cagcgatgca caatatccac ccgggagcga aggcacccgc accccgtttg
     6601 tgccgttgga ttggcgcaac gccagtgccg cgcaggtcaa ggtacaatat aagaggtcgg
     6661 cagcctcgga tgcagcgctt gcaatgaacg agggttcgcg ggcccctgat tatgcgtccg
     6721 gaccggtgtg ggcaatcttt gattccgccg cggcagcgcg gggaggctgg cagcttcgct
     6781 acccctacgt cgccgacccg cccgacgggt acttccacaa agccgatacc cttgccgagc
     6841 tagccaagaa ggtcaccgga catccgtatc agaagatgcc cctgaagcac ctggaggaga
     6901 cggtggcgag gtacaacgcg ttcgcagaca aa
//
LOCUS       DATILV010000475         7296 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1133715, whole genome shotgun sequence.
ACCESSION   DATILV010000475 DATILV010000000
VERSION     DATILV010000475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7296
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1133715"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1082
                     /locus_tag="VLJ17_10750"
     CDS             <1..1082
                     /locus_tag="VLJ17_10750"
                     /inference="COORDINATES: protein motif:HMM:NF018448.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HSV23494.1"
                     /translation="SLSLDSITASVRGGGGWATATREIGPPGINAWQIGKLEELAQTR
                     GPALTPREIAAKLVEIEFAPPSYSDTQVATAIGVASAGLAFLNSGSAVEVIAAGTGGG
                     IGQWLRSRLSHRRLNQYAISSLSAVTASGLYVLVATLADQIGFGFELHSAGFISSVLF
                     LVPGFPLIAGLFDLLQYQTVAAVSRLAYGVMILAAVAFGLSIVIAVAGVDLSPRPLPE
                     IAYPVTLLLRAVASFAAACSFAILFNNGGRAVFAAGLLAIGANDLRLVLQDAGMMPAS
                     AAFFGALAVGLVAPLAGQRFAMPRIAIIVPVIVLMVPGMSAFKMIVLFNRGQMLDALE
                     ASASCGFAMGALAMGLAAARFFGHR"
     gene            1722..2312
                     /locus_tag="VLJ17_10755"
     CDS             1722..2312
                     /locus_tag="VLJ17_10755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23495.1"
                     /translation="MPVQSGMHFFLNWAKERIDEMDATLASLESKAGEVQADSRAKAN
                     QLITDLQKQRDAFRETVEKQAEAGEAVWARTKAQLETEWVGFENEVAKYIDTFGRQIG
                     QQQATFQHLVVAQLRAWREVADKVRDAAGEFGAERRGEIDASVARMKADAGTAEEKLQ
                     KLARAGTESWSALNAALAETRTAFDRANQTARDAFK"
     gene            2421..2906
                     /locus_tag="VLJ17_10760"
     CDS             2421..2906
                     /locus_tag="VLJ17_10760"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSV23496.1"
                     /translation="MDPLIRRPEEILAYRPLRRILGPEPWALWTVGPADSVLAALRIM
                     ADKNIGFLVVLEQGAVVGVLSERDCVRRVVLANKSPETTPTADIMVRNVVTVDLAHAF
                     ADCLRLMHEHSIRHLPVVDNGKAVAVVSIRDLLSEAVTHHAKIITELERERMTIFTST
                     A"
     gene            2964..4349
                     /locus_tag="VLJ17_10765"
     CDS             2964..4349
                     /locus_tag="VLJ17_10765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018259951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HSV23497.1"
                     /translation="MGLLIVLGALVFLMFVAYRGYSVILFAPVAALGAVLLTEPSLVP
                     PMFSSVFMEKMVGFVKSYFPVFMLGAVFGKVIELSGFSKSIVSAVIGVLGRERAVLSI
                     VVVCALLTYGGVSLFVVVFAVYPFAAEMFRQSGIPKRLIPCTVALGAFSFTMDALPGT
                     PQIQNIIPTTFFKTTTWAAPWLGLIGSLFVLGCGLAYIESRRRTAQARGEGYGINLHN
                     EPEAFAAEKLPNPWIALSPLVVVGVANFLLTHLILRAYGPVHEITLGGKPIVTQVPVV
                     AAIWAVEGALLLGILTVFVFAWRPVLARFADGSKAAVAGALLASLNTASEYGFGGVIA
                     LLPGFTLIADLLRAIPNPLVNEAITVTVLAGITGSASGGMSIALAAMSDTFIAAAEAA
                     NIPLEVLHRVASMASGGMDTLPHNGAVITLLAVTGLTHKVAYKDVFAITLIKTASVFA
                     VIGVYYLTGLY"
     gene            4422..6692
                     /gene="pflB"
                     /locus_tag="VLJ17_10770"
     CDS             4422..6692
                     /gene="pflB"
                     /locus_tag="VLJ17_10770"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008861 - formate C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006113 - fermentation [Evidence IEA];
                     GO_process: GO:0015942 - formate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HSV23498.1"
                     /translation="MEGTVGLGRTLNSERCWRGFKPGNWRSSIDVRDFIVCNVTPYAG
                     DEKFLVGPSKRTKAVWDKLQPYFQEERKKGVLAVDARTPSVLLAHEAGYIDRENEVIV
                     GLQTDQPFKRAIFPWGGLRMVEAGLKAAGFEADPQVHETFTKYRKTHNDGVFDAYTPE
                     IMRCRRSGIITGLPDAYGRGRIIGDYRRVALYGVEHLLEVKRAERAQVDDMWPTDEVI
                     RIREELADQMRALEDLVSMAKLYGFDIARPATDAQEAVQWTYFAYLGAIKEANGAAMS
                     IGRISSFLDVFIERDLQEGALDESGAQELWDQLVQKLRIVRFLRTPDYDALFSGDPYW
                     ATECIGGMDLNGRPLVTKSSYRMLHTLTNLGPAPEPNVTVLWSKYFPENFKRYCVKVS
                     KDTSSLQYENDDLMRPYWGDDYAIACCVSAMRLGKQMQFFGARVNLAKALLYAINGGR
                     DENSGEQVAPPTPAVISDVLSYDEVFEKFDHTMEWLARTYVHAMNCIHYMHDKYFYER
                     LEMALHDRDVLRTMAFGIAGLSVVADSLAAIKYGKVHVIRDDAGLAVDYRIENKVSVP
                     QFGNNDDRVDSIASDIVTRFMEKIRKHPTYRGATHTQSVLTITSNVVYGKVTGNTPDG
                     RRKGEPFAPGANPMHGRDCHGWLASCLSVAKLPYRDALDGISYTVSVAPQKAHLSEIE
                     LIDAAVKAFDMYFDHGGFHMNLNVVDKETLEDAMKNPDKYPQLTIRVSGYAVNFVRLT
                     REQQLDVISRTFHGQV"
     gene            6714..>7296
                     /locus_tag="VLJ17_10775"
     CDS             6714..>7296
                     /locus_tag="VLJ17_10775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S cluster-binding domain-containing
                     protein"
                     /protein_id="HSV23499.1"
                     /translation="MLQLGNLEAGSRHDLHVGVSPDAPDEGELRDDAEGAFGYAHSYE
                     TASRYDGPGLRVVLFVSGCLLRCTYCHNPDTWHLKDGTYVSAQQVIDRLGTFAAALRS
                     LDGGLTISGGEPLVQLGFTRRILAAAKQMGLHTAIETSGFLGDRVDDRYLSCLDLVLL
                     DIKSSDPETYRAVTGRDLAPTLRFAERLAAIGKP"
BASE COUNT         1410 a         2078 c         2231 g         1577 t
ORIGIN      
        1 tgagcctatc gctcgacagc atcactgcga gcgttcgcgg gggtggcgga tgggccacgg
       61 cgacgcgcga gatcggaccg ccggggatca acgcttggca aattggcaag ctggaagagc
      121 ttgcgcagac gcggggaccc gcacttacgc cgcgtgaaat cgcagccaag cttgtggaaa
      181 tcgagtttgc accacctagc tattccgaca cccaggtcgc cacagcgatc ggcgtggcaa
      241 gcgcaggatt ggcattcctc aatagcggtt ccgcagtgga agtgatcgca gcgggaactg
      301 gcggcggcat tggccagtgg ttacgatcgc ggctatccca ccgtcgccta aatcaatatg
      361 ccatctcctc attgtccgcc gttacggcat ccgggctcta tgttctggtc gcgacgctgg
      421 ctgaccaaat cggcttcgga tttgagctcc attccgccgg cttcatctcg tcggtacttt
      481 ttctggtccc tgggtttccc ttgatcgcag ggctattcga tcttttgcaa taccagaccg
      541 tcgctgccgt cagccgcttg gcatatggtg tgatgatcct ggcggccgtc gcgttcggcc
      601 tcagcatcgt tatcgccgtc gccggagttg acctgtcgcc gcggccgtta ccggaaatcg
      661 catatccggt gacgttgttg ctgcgggcag tcgcaagttt tgccgccgct tgcagcttcg
      721 caattctgtt caataatggc gggcgcgctg tgttcgcagc gggtcttttg gcaatagggg
      781 caaacgatct gcgcctggtc ttacaagacg ccgggatgat gcctgcctcg gcagcttttt
      841 ttggcgctct ggctgtgggg ctggtggccc cgctggctgg ccagcgcttc gctatgccgc
      901 gcatcgcaat catagtgcca gtgatcgtcc ttatggtgcc tgggatgtct gcattcaaga
      961 tgatcgtact gttcaatcga ggacaaatgc ttgacgccct tgaggcatcc gcttcgtgtg
     1021 gcttcgcgat gggcgccttg gcaatgggcc tggcggccgc gcgctttttc ggccaccgat
     1081 agccgtgaaa gtgagtgtcg tggatgggcc tgcgagacgg ccacttggtc atcaatttcc
     1141 gcaggttgtc cacgattaca tctatgacaa gtccgtcatt cataacgcgc aagcggggac
     1201 acttgacgcc tgctcgtcat cctcaaacgc gaaccgctcg agtgttccct ttcggtatgc
     1261 gcactaaccg agtcgggcca tagaccagcg gccctttttt gagtgtcggc aacggcgtgt
     1321 gtagcgcggc ttactaaatt agcgatgtcg cgcggttggt tgcggcgacc ggtgcggttg
     1381 acaggctttg gttcggccgc cgcgaaaatt gcttggccga tgcgtggggg cgaggaaagt
     1441 acgtccggcg gcgatgggtc tctcgatggt cgtgctcgct agcgcgctgg tcggagccgc
     1501 gatagcgcta gatggatatg aatagtgggc cgcacaagag cggggcgatc ccgagcacca
     1561 atcgcaggta gttttcttat caccttgcac gacgtcccgg ctttccctcg aagcctcgtt
     1621 gaaacctgcc gaccgaggtt gacatttatc aatgcgtaag tttcggcggt gtgcgatgaa
     1681 attcttaaaa aagggggggt aatcaagggg aggatcgtcg aatgcccgtg caaagcggca
     1741 tgcatttctt tctgaattgg gccaaagaga gaatcgacga gatggatgcc accttggcat
     1801 cgctcgaaag caaggcgggt gaagttcaag cggactctcg cgccaaggcc aatcagctca
     1861 tcaccgactt gcagaaacag cgcgacgcct tccgagaaac cgtcgaaaag caggcggagg
     1921 ccggtgaggc cgtatgggcg cgtaccaagg cacagttgga gaccgagtgg gtcggctttg
     1981 agaacgaagt cgccaaatat atcgacacct tcggcaggca aatcgggcag cagcaggcta
     2041 cctttcaaca tttggtcgtc gctcaactga gggcttggcg cgaagtggcc gacaaggttc
     2101 gtgatgctgc aggcgaattc ggggccgagc gccgaggcga aattgacgcg agcgtggcgc
     2161 ggatgaaggc tgacgccggc acggcagagg aaaagctcca gaaactggcc cgggcaggaa
     2221 ccgagtcctg gtccgccctg aacgccgcgt tggcagaaac acgtacggcg tttgatcggg
     2281 ccaatcagac agcacgtgat gcgttcaagt aagccaatcg gagcgtcaga tcttggcgtc
     2341 cggtggcccg atgccttagt ggggaaaggc gcttttaggt tttgcaggcc acgctgttca
     2401 cgtgaacgcg gaagctcgtc atggatcctc tcatcagacg tccagaagaa attctagctt
     2461 atcgtccgct gcgacggatc cttggcccgg agccctgggc tctgtggacc gtcggccctg
     2521 ccgatagtgt gctggcggcg ctgcgcatca tggccgacaa gaacatcggc tttctcgtcg
     2581 ttctggagca gggggcggta gtcggcgtct tgtcggaacg cgattgcgtc cggcgggtcg
     2641 tgctggccaa taagtcccca gagacaacgc cgacagcaga tatcatggtt cgcaacgtcg
     2701 tcaccgtcga tctcgcgcac gcatttgccg attgtctgag gcttatgcat gaacatagca
     2761 tccgccacct tccggtggtc gacaatggca aggcggttgc cgtggtctcg attcgtgatt
     2821 tgttgagcga agccgtcacg caccatgcaa agataatcac cgaacttgaa cgtgagagga
     2881 tgaccatttt cacatcgacg gcatagccgt ttccgcgatt ctgcgttcca ccgtcataat
     2941 ggacaacatt aggagttttc ctcgtgggtc ttctgattgt cctaggtgca ttggtttttc
     3001 tgatgtttgt ggcctatcgc ggctacagcg tgattttgtt tgcgccggtg gctgcccttg
     3061 gggcggtgct gctcaccgaa ccttcgttgg tcccgcccat gttttccagc gtgtttatgg
     3121 agaagatggt cggctttgta aaaagctatt ttccagtgtt tatgctcggc gcagtattcg
     3181 gcaaggtcat cgagctatcg gggttctcta agtcaattgt ctccgcagtg atcggggtgc
     3241 tcggccggga gagggcggtg ctgtcgattg ttgtggtctg cgcgttgctt acatacggcg
     3301 gcgtgtcact gtttgtggtc gtcttcgcgg tttatccgtt tgcagccgaa atgtttcgtc
     3361 agagcggcat cccaaaacgg ctgatcccct gcacggtcgc gctcggcgca ttcagtttca
     3421 caatggatgc cctgccgggc acaccccaga tccagaacat cattcccaca accttcttca
     3481 agacgacaac ttgggccgcg ccatggctcg ggctgatcgg cagcctgttc gttctcggct
     3541 gcggcctcgc atatattgag agccgccgcc gtaccgcgca ggcgcgtggg gagggctatg
     3601 gcatcaatct tcacaatgag ccggaggcat tcgcggccga gaaattgccg aatccctgga
     3661 tcgccctgtc gccgctcgtg gtggttggcg tcgccaactt tctgctcacg catttgatac
     3721 tgcgcgccta cggtccagtg cacgaaatca cgctaggcgg taaacctatc gtcacccagg
     3781 ttcctgtcgt ggcggcgatc tgggcggtgg agggagcgct actgctcggc atcttgacgg
     3841 tgttcgtatt cgcctggcgg cccgttcttg caagatttgc tgacggcagc aaagccgccg
     3901 ttgccggagc cctgctggca tcgctcaaca ctgcttcgga gtacggattt ggtggggtga
     3961 tcgcgctact gcctggtttt acgctgatcg ccgacctgct ccgggccatt cccaatccgc
     4021 tcgtcaacga agccatcacc gtgactgtgc tggccggcat aaccggctcg gcttccggtg
     4081 ggatgagcat cgcccttgcc gcgatgtccg acacctttat tgccgctgct gaggcggcga
     4141 acatcccgct cgaggtatta catcgcgtcg cctcgatggc cagcggcggc atggacacgc
     4201 tgccgcacaa tggcgcggtc atcaccttgc ttgcagtcac cggcctcacc cacaaggtgg
     4261 cctataaaga tgttttcgcg attactctga ttaagactgc ttcggtgttc gctgtaatcg
     4321 gggtgtacta tttgacgggt ctttattgaa ggctccaagt gctgcgtgcc aatgctcgtg
     4381 acggtaagtt gaaattataa acagataaag ggagacatgc catggaaggg acagtcggcc
     4441 ttggaaggac tctgaatagc gaacgttgct ggcgaggatt caagccggga aactggcgca
     4501 gcagtatcga cgtgcgcgac ttcatcgtct gcaacgtcac gccttatgct ggcgacgaga
     4561 agtttctcgt tggcccttcg aagcggacca aggctgtgtg ggacaagctc cagccctatt
     4621 ttcaagagga gagaaagaag ggcgtactcg ccgtcgatgc acgaacgccc tcggtcttgc
     4681 ttgcgcacga ggccggttac atcgaccgcg aaaatgaggt cattgtcggg ctgcagacgg
     4741 accagccatt caaacgcgcc atatttccgt ggggcggctt gcgcatggtc gaagccgggt
     4801 tgaaagctgc cggcttcgag gccgatcctc aggttcacga aactttcaca aaataccgca
     4861 agacccacaa cgacggcgtg ttcgatgcct acacacccga aatcatgagg tgtcggaggt
     4921 cgggcatcat caccggcctt ccagacgctt acgggcgggg acggatcatc ggcgattatc
     4981 ggcgtgtggc tctctacggc gtcgagcatc tccttgaggt caagcgcgcg gaacgcgcgc
     5041 aggtcgacga tatgtggccg accgacgagg tgatccgcat ccgcgaggaa ctcgcggatc
     5101 agatgcgcgc gctggaggac ttggtatcga tggctaagct ttatggcttc gatatcgcgc
     5161 gtccggcgac cgacgcccag gaggccgtcc aatggacata ctttgcatat ttgggcgcca
     5221 tcaaggaagc aaacggtgct gcgatgtcga tcgggcgcat ctcgagcttc ctcgacgtct
     5281 tcatcgagcg agacctgcag gaaggcgctt tggatgaatc cggtgcgcag gagctttggg
     5341 accagctggt tcaaaagctt cgcatcgtcc gctttctccg taccccggat tacgatgccc
     5401 tcttcagcgg cgacccctac tgggcaaccg aatgcatcgg cggcatggat ttgaacgggc
     5461 ggccgctggt gaccaagagc agctatcgga tgctgcatac gctaacgaac ctcgggccgg
     5521 caccggagcc gaacgtcacg gtgttgtggt ccaagtattt cccggaaaat ttcaagcgat
     5581 actgcgtcaa ggtcagcaag gacacgtcat cgctgcaata cgaaaacgac gatctcatgc
     5641 gcccctattg gggcgacgat tacgccattg cgtgctgcgt ctcggcaatg cgtctcggca
     5701 agcagatgca gttcttcggc gcgcgggtca atctcgccaa ggccctcctc tacgcaatca
     5761 atggcggccg tgacgagaat tcgggcgaac aggtggcccc gccgacgcct gccgtcatca
     5821 gcgacgtact tagttacgac gaggtgttcg aaaagtttga ccacacgatg gagtggcttg
     5881 cgcgcactta cgtgcatgcg atgaactgca tccactacat gcacgacaag tacttctacg
     5941 aacggctcga gatggccctc cacgaccgcg atgtgcttcg cacgatggcg ttcggcatcg
     6001 ccgggctgtc ggtggtcgcc gacagcctcg cggccatcaa atacggcaag gtccacgtaa
     6061 ttcgagacga cgctgggctc gctgtcgact atcgcatcga gaacaaagta tcggtcccgc
     6121 aattcggcaa caacgacgac agggtggaca gcatcgcctc cgatattgtc acacgcttca
     6181 tggagaaaat ccgtaagcat ccgacctatc gcggtgcaac tcacacgcag agcgtgctga
     6241 ccatcacgtc gaacgtcgtc tacggcaagg tgaccggcaa tacgcctgat gggcgccgca
     6301 agggcgagcc tttcgcgcct ggcgccaatc cgatgcatgg ccgcgactgc cacggctggc
     6361 tggcgtcctg cctctcagtt gcgaagctgc cttataggga tgcgctcgac gggatcagtt
     6421 acacggtttc ggtggcgccg cagaaggcgc atttgtcgga gatcgagctg atcgacgctg
     6481 ccgtcaaggc attcgacatg tatttcgatc acggcggctt tcacatgaac ctgaacgtcg
     6541 tcgacaagga gacgctcgag gacgcgatga agaatccgga caagtatccg caactcacga
     6601 tccgggtttc cggatatgcc gtaaacttcg tgcggctgac gcgtgagcag cagctggatg
     6661 tcatcagccg tactttccac ggacaggtct gacctccgag gggagcgaaa gcaatgttgc
     6721 aacttggcaa cctcgaagcc ggcagccggc atgacctcca cgtcggggtc tctcccgacg
     6781 cgccggacga aggcgaattg cgtgacgacg ccgaaggagc cttcggctac gcccattcct
     6841 acgagaccgc ctctcgatac gacggccccg gcctgcgcgt cgtgctgttc gtgtcgggtt
     6901 gcctgctgcg ttgcacttat tgccacaatc cggatacgtg gcacttgaag gacggcacct
     6961 acgtgtcggc gcagcaggtg attgaccggc tcggcacttt tgccgctgcg ctgcgatcgc
     7021 tggatggcgg actgaccata tcgggtgggg aaccgctggt tcagctcggc ttcacgcgcc
     7081 gaatactggc tgccgccaag cagatgggac ttcataccgc gatcgagacc tcgggttttc
     7141 tgggcgaccg cgttgacgac agatatttgt cctgccttga tctcgtgctg ctcgacatca
     7201 agagctccga tcccgaaact taccgcgcgg tgaccgggcg cgatttagcg ccgacgctgc
     7261 gctttgcgga gcgtctggcc gccatcggca agcccg
//
LOCUS       DATILV010000476         4618 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2414630, whole genome shotgun sequence.
ACCESSION   DATILV010000476 DATILV010000000
VERSION     DATILV010000476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4618
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2414630"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(166..573)
                     /locus_tag="VLJ17_10780"
     CDS             complement(166..573)
                     /locus_tag="VLJ17_10780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020085996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF126 domain-containing protein"
                     /protein_id="HSV23500.1"
                     /translation="MAKVFRARQGIGRTVRGVALVAQDGFSARYDLDRIAGIFSRPTH
                     KLAGQSYVGKILILDTAKGGVASAWMLHEMASRGVTPLALVFNSVNPIIVQGAALADL
                     PMLTGFDEDITAAVPNGNEVEVNPSTGELTLLE"
     gene            complement(579..1811)
                     /locus_tag="VLJ17_10785"
     CDS             complement(579..1811)
                     /locus_tag="VLJ17_10785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitase X catalytic domain-containing protein"
                     /protein_id="HSV23501.1"
                     /translation="MKLNDEEQDTLAGKFGPVVRRALEHQKKVGEFFDADDFVPVTQA
                     HIMADTESLGEAGVRWLENLAAISEGRTQVRVPTITDPRGTDFAKAAFLGQRPAMLDL
                     EQRTISALVKLGVAMTDTCIHYQTIQAPARNEHVAFGDTGVVIYSNSVCGARSNFEGG
                     PSALAAGLTGRTPRYGFHRPAQRRATLHVRVDLTPTSLNDWGALGAVIGRLAGNYWAV
                     PVIEGIEEAPRSDQLKHFGAAMASFGSVALFHLVGLTPEAARLGDVAPAGLPTYRVVR
                     TDIDRLRSSYYCDGRVDVVVFSAPQLSLFELRDLANLCEGCRFSVPVLAVTSPQVKPD
                     SDRMGYTARIEAAGGTVLSGMCFYQSYAREIAEANGWKSLATNSVKLVNILGGYGYQP
                     ILASMEQCVDAAVNGKLA"
     gene            complement(2051..3034)
                     /locus_tag="VLJ17_10790"
     CDS             complement(2051..3034)
                     /locus_tag="VLJ17_10790"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV23502.1"
                     /translation="MRIPRRRLLHLAASAAALPVLSRIAMAQTYPRRQVTLIVPFPAG
                     GATDVVARVLAKGLSERIGQPVVVDNRPGANGAIGSASVAKARPDGYVLVMGGVNTHA
                     MNDSLIKPRPYDSARDFAPITLTALIPIAFVVNPQLPVTTLQELVALARSKPRQLSYG
                     SSGAGGPQHLAMELFKLAAGVDLVHVPYKGGAPQLNDLIGGHILIGSIGLPPALPHIE
                     TGKLRALAVTDSKRSVFLPNLPTVAESGFPNFEMSYWLGLMAPAGTPRDIIDKLATES
                     VAVLKTQETRAALAKQGAEVVTSSPDEFKKLVENDITKWSKVIQDAGITPE"
     gene            3640..3843
                     /gene="merF"
                     /locus_tag="VLJ17_10795"
     CDS             3640..3843
                     /gene="merF"
                     /locus_tag="VLJ17_10795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007068548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mercury resistance system transport protein
                     MerF"
                     /protein_id="HSV23503.1"
                     /translation="MTDKRLLTTGIIGVGVAALCCFTPALVALLGAVGLSAAVGWLDF
                     VLLPAVAVFVAIIVYTLIRRRPA"
     gene            3840..4040
                     /locus_tag="VLJ17_10800"
     CDS             3840..4040
                     /locus_tag="VLJ17_10800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:3912..3914,aa:Sec)
                     /transl_table=11
                     /product="GDCCVxC domain-containing (seleno)protein"
                     /protein_id="HSV23504.1"
                     /translation="MILESTITCPMCGHQAREKMPTDAUQFLYQCKGCGERLKPKVGD
                     CCVFCSYGSVPCPPIQAGDCFH"
BASE COUNT          955 a         1373 c         1381 g          909 t
ORIGIN      
        1 attggcactg aagcgaagtg gcgcgatgtc cgcgatcctg tcgctatcag gggtgaagcg
       61 gaccagatat gctctctgga agttcttccg cctgtgaccc aaagccgtca tcgcgaatgt
      121 gaaatgacaa atgacggctt ggtcggaaat cagtacggaa tatctctatt ccagcaaagt
      181 cagctcgccg gtactcggat tcacctccac ctcgttgccg ttaggaaccg cggcggtaat
      241 gtcctcgtca aatccggtga gcatgggcaa atctgccaga gcggcgccct gcacgatgat
      301 tggattcacg gaattgaata ctaatgcaag cggcgtcacg cctcgggatg ccatctcgtg
      361 aagcatccac gcggaagcta cgccaccctt ggctgtatcc agaattaata tcttgccgac
      421 gtaggactgg ccggccagtt tgtgggttgg tcgagaaaat atgcccgcaa tgcggtcgag
      481 gtcgtaccgc gccgaaaatc catcttgcgc cacaagcgcg acaccccgga cggtgcgtcc
      541 tatgccttgt cgtgcgcgaa atactttggc catcgcgatc acgccagctt gccgttaacg
      601 gccgcgtcga cacattgctc catcgacgcc aatatcggtt gatagccata tccgcccaat
      661 atgttcacca gcttgacgct gttggttgca aggctcttcc agccattagc ctccgcaatt
      721 tcccgagcat aggattgata gaagcacatg cccgacaata ccgtaccgcc ggcggcttca
      781 atgcgtgcgg tgtagcccat gcggtcggag tccggcttga cctgtgggct ggtgaccgcc
      841 agcacaggga ctgaaaatcg gcacccttca cacagattcg ccaagtcgcg cagttcgaaa
      901 aggctgagtt gcggcgctga gaataccact acgtccacgc gaccatcgca gtaataggag
      961 ctccgcaacc tatcaatgtc agtgcgcaca acgcgatacg tcggtaatcc ggcgggggcc
     1021 acatcgccca gtcgcgcggc ttccggagtg aggccgacca gatgaaacag cgcaacggag
     1081 ccgaaactcg ccatcgcggc gccgaagtgc ttaagttgat ccgatcgcgg cgcctcttca
     1141 atcccttcga tgaccgggac agcccaatag ttgcccgcta agcgcccgat cacggcgccc
     1201 aacgcgcccc agtcgttgag cgaggtgggc gtcaggtcca cccgaacatg cagagttgcg
     1261 cggcgttgtg cggggcggtg aaagccgtag cgcggcgtgc gtccggtaag accagcggcc
     1321 agcgccgatg gcccaccctc gaaattggag cgcgcgccgc agacggagtt ggaatagatg
     1381 accacgcccg tatcaccaaa ggcgacatgc tcgttgcgag cgggtgcttg aatggtctga
     1441 tagtgtatgc aagtgtcggt cattgcgacg ccaagcttga ccaaggcaga tatggtgcgc
     1501 tgttccaggt cgagcatcgc gggtctctga cccagaaacg cggccttcgc aaaatcggtg
     1561 ccgcgcgggt cggtgatggt tggcacgcgc acctgtgtgc gcccttcgga gatcgcggcg
     1621 agattctcca gccaacggac gccggcttca ccgaggcttt cagtatcggc catgatatgt
     1681 gcctgcgtca ccggcacgaa atcatcggcg tcgaagaact cgccaacctt tttttgatgt
     1741 tccagagccc gccggacgac cgggccgaac ttacctgcca gtgtgtcctg ctcttcgtcg
     1801 tttagcttca tcgaatgtca gttgaccgtt gtaccagagc cccgaacagc cttgccccac
     1861 ttcgccagtt cactggccgg aaattcagca aatgctgggc acgtcatggc gtcggggcaa
     1921 ctcccagggg ttcaagatta ccgtggaatg cgtcgctgcg cacgatacgc tcgacctcga
     1981 ccgaattata tcagcccgaa tacacggccg caggggatga ttctatgagg tacgtcccga
     2041 tgttccgcgc tcattcaggg gtgatgccgg cgtcctggat caccttggac cattttgtaa
     2101 tgtcgttctc gacgagcttc ttgaattcgt caggcgaact ggtcacgacc tcggcgccct
     2161 gcttggccag cgccgcgcga gtttcctgtg ttttcaggac cgccacactc tcggtggcga
     2221 gcttgtcgat gatgtcgcgt ggcgtgccgg ccggcgccat tagcccgagc caatagctca
     2281 tttcaaagtt gggaaatccg gactccgcta cagtcgggag gttcggcagg aaaactgagc
     2341 gcttggagtc ggtgaccgcc aatgctcgca atttgccggt ttcgatatgg gggagcgccg
     2401 gcggcaggcc gatcgagccg attagaatgt ggccaccaat caagtcgttg agttgcggtg
     2461 cgccaccctt gtaggggaca tggacgaggt cgacaccagc ggcaagcttg aaaagctcca
     2521 tagccaagtg ctggggccct ccggcgcccg atgagccgta gctcagttgc cgcggcttgg
     2581 atcgcgccag agcgacaagt tcctgaagcg tcgtaaccgg caattgagga ttaacgacga
     2641 acgcgatcgg gatgagggct gttagcgtaa tcggcgcgaa gtccctggcg gagtcgtagg
     2701 gacggggctt gatcaggctg tcgttcattg catgcgtgtt aacgccgccc atgacgagca
     2761 cgtagccgtc agggcgggcc tttgccaccg aggcgctacc gatagcgccg ttcgcacccg
     2821 gccgattgtc aacgacaacc ggttgaccaa ttcgctcgga caggcccttc gcgagaacgc
     2881 gcgcaacgac gtcggttgcc ccaccagccg ggaatgggac aatcagcgtg acctgccgcc
     2941 tcggataggt ttgcgccatc gcgatgcgcg agaggaccgg tagggcggca gcgctcgctg
     3001 ccaagtgtaa caatcgacgg cggggaattc tcatgacgtt ctccaaaagg ggcagcagct
     3061 acgattgaga cgcgggcatc gcctattaca aagcgatctc ggatcgacgt ttgaaatgct
     3121 cgcctgccga tggcatcagc gctgctgctg aaatgagggg gattcggcat gtcccggcgg
     3181 cagctctacg cttcaggcta catcacggtc gcatgtgtac ggaagcggcc atggcggctc
     3241 ttggcacttc acgtcggaca cgggcagctt gatctcatgt cccggtttcg gacgcggttc
     3301 ggaagccgat ggatgtggcg gcctttcccg ccgcgacgcg aatgacccat ctcagacatt
     3361 tccggctgag gtaccctcgg gtgcgtcttg tgggttgacc cttgcatgct aatcctgctg
     3421 ctgaccgcct tttatgtaga taacggcaag aacttacctc tttggagaga actcccttcg
     3481 attgcgtatt ggctattgcc gggggcggtt ggcatgccgc tcatcgtcca cgcgctcttg
     3541 aggcatccac tggcacggcc gcggaatgag ggccgccgct cgttttcaca cactggaaat
     3601 tgatgcgctc gccagggtca cgcggggtat tagcggggca tgaccgacaa gcgcttgctg
     3661 acgaccggca ttatcggggt gggcgtggcc gccctgtgct gcttcacccc ggctcttgtt
     3721 gctctattgg gcgcagtcgg gctctcggct gcggtcggtt ggctggactt cgtattgctc
     3781 ccggccgtgg ccgtcttcgt cgcgatcatt gtctatacgc tgatccgcag gaggccggca
     3841 tgatcctgga atccaccatt acctgtccga tgtgcgggca tcaggcgcgc gagaaaatgc
     3901 ctacggacgc ctgacaattc ctctatcagt gtaagggctg cggcgaacgg ctgaagccca
     3961 aggtgggcga ctgctgcgtg ttctgttctt acggctccgt gccgtgccca ccgatccaag
     4021 caggcgattg ctttcactag ccttggcggc gccttaagat acttcagcgc taccgcaatc
     4081 tcgaggccga cgactacaac gcggagaagc cgcgcaagct catttcaaat ccattccgcc
     4141 catcatgtca tgccatccat catgggctca cgtcgagttt cagatgccat cccagctacg
     4201 aagaatcaaa actggtaaac agccccgccc aaaacgacca cagaccgagg gcgataaaga
     4261 tggcgccggt ccacagcggc gcgcgatccg acagaccggc aagccagtca agcgagcgcc
     4321 gcgccgcttc gaacagaacc gccgcaacca gcggcagtga taacgcaaac ccgaagaccg
     4381 ccagcgagat aaatccttgt acaagtgtcg cgccggacgc gccgctgcca caccaaacag
     4441 gccgaagatc aacggtgccg cacaggcggg gatgttgagc ccaaagagaa gaccgaggta
     4501 tgcggaatag cgtgcatcgg agaaggcagc gaaccgaggc ccgatcgata tcatcaggac
     4561 acgggctttc ccgattaggt agaggaatcc aatcaggaca tagaaaattc caagcaac
//
LOCUS       DATILV010000477         2236 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3949235, whole genome shotgun sequence.
ACCESSION   DATILV010000477 DATILV010000000
VERSION     DATILV010000477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2236
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3949235"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(58..831)
                     /locus_tag="VLJ17_10805"
     CDS             complement(58..831)
                     /locus_tag="VLJ17_10805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HSV23505.1"
                     /translation="MSHATPIKSAPVIECAECAGEKADRRRADSAAQAIAVETKNLSR
                     AVVDKVLLRDISVQVQKGEVLAVVGPSGAGKSSFLRLLNRLDEATDGTVLLDGEDYRS
                     IAPRELRRRIGMVMQMAYLFPGTVAGNIAFGPLQRHETMSQEQIEALLDRVALPGYQD
                     RDVNTLSGGEAQRVSLARTLANSPEVLLLDEPTSALDEASARGIEELVLGIIRERQMT
                     CVIVTHNMQQAARIADRTMHLEAGKLVAIVPTNGVSHAG"
     gene            complement(849..1394)
                     /locus_tag="VLJ17_10810"
     CDS             complement(849..1394)
                     /locus_tag="VLJ17_10810"
                     /inference="COORDINATES: protein motif:HMM:NF021425.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2127 domain-containing protein"
                     /protein_id="HSV23506.1"
                     /translation="MIRPATHTVAVTGKMSQQQVHRLFAVSVLIKGVDGVLETIGGIL
                     FMFISPKALNSLVIVFTAHELSEDPDDWFATTLRHTVNNLSSDTKLFVSAYLVAHGLI
                     KVFLVAGLLRKKLWAYPAALWFLGIFVFYQLYQFSHTHSLGLLALSAFDLFVASLVWL
                     EYRSRKQHADNVMGTGGERLF"
     gene            complement(1400..>2236)
                     /locus_tag="VLJ17_10815"
     CDS             complement(1400..>2236)
                     /locus_tag="VLJ17_10815"
                     /inference="COORDINATES: protein motif:HMM:NF014090.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005384 - manganese ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030026 - intracellular manganese ion
                     homeostasis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VIT1/CCC1 transporter family protein"
                     /protein_id="HSV23507.1"
                     /translation="QLIPIEQRHFAFWQDFFDLHVEALDLARRLKLVLLVAICRLFGA
                     PAIHLVLEAIEVHGVRKYLRVWSAYGNGPLGAAVRNILEDEFKHEDEVVTGTTQRQIN
                     PEGVRDIFLGLNDGLVEIVGAVSGFFAAFGNSLAVLVAGLTVSVAGALSMAAGAWIAV
                     SSESEVRTTEVARRRFLGESMSAIGTAEKPLVSATIVGVSYLAGALVPLLPVLGGART
                     VFPSLFTAGSLIVIVSIIVAFLSGMSIKRRVVTNLLITAAAVGITFAIGVVTKRVWGV
                     SV"
BASE COUNT          508 a          691 c          605 g          432 t
ORIGIN      
        1 gcgcctgccg cctgggccat tcccatcctg acgtcgctgc tcagactctg catcaaatca
       61 gccagcatgt gacactccat tcgttggaac aatcgcgacc agcttgccgg cttccaggtg
      121 catcgtgcgg tcggcgatgc gggcggcctg ctgcatgttg tgcgtgacaa tcacgcaagt
      181 catctgccgc tcgcggatga tacccagcac aagctcctcg attccgcgcg ccgatgcttc
      241 atcgagggcg gaggtcggct cgtccaacag caacacctct ggagagttcg ccagggtgcg
      301 cgctagcgac acgcgttgcg cctcgccccc cgatagggtg ttcacgtcgc gatcttggta
      361 gccgggtaag gcgacgcgat cgagcagcgc ttcgatctgc tcctgcgaca tcgtctcatg
      421 gcgttgcagg ggaccgaagg cgatgtttcc agccacggtt cccgggaaca ggtaggccat
      481 ttgcatgacc atcccgatcc ggcgccgcaa ttctcgtggc gctatggaac gatagtcctc
      541 accgtcgagc agcaccgtac cgtccgtcgc ctcatcgagc cggttcagca gccggaggaa
      601 agacgatttc cccgccccgc tcggaccgac aaccgcaagc acctcgcctt tctgcacttg
      661 cacactgata tcgcgtagca gaaccttgtc cacgacagcc cgggagagat tcttggtttc
      721 gaccgctatg gcttgagccg ccgagtcagc acgacggcgg tcagcttttt cgcccgcgca
      781 ttcagcgcat tcgatgaccg gagcggattt gatgggcgtt gcatgcgaca tgtccttgct
      841 ttccagtttc aaaacagacg ttccccgccg gtacccatga cgttatccgc atgttgtttt
      901 cgcgaccgat actccagcca caccagcgat gccacgaaga ggtcaaaagc actcaatgcc
      961 aagagaccga gtgagtgtgt atggctaaac tgatacaact ggtaaaaaac gaaaataccc
     1021 agaaaccaaa gcgccgccgg gtaagcccaa agttttttgc gtaacagacc ggctactaaa
     1081 aagactttga taagtccgtg agcaacaagg taagcgctca cgaaaagttt ggtgtccgat
     1141 gataaattgt taacggtatg gcgcaacgtt gtggcaaacc aatcgtcagg atcttcggac
     1201 agctcatgtg cagtgaaaac gatgacgagg ctattgagcg ctttcgggct gataaacata
     1261 aagaggatac cgccgattgt ttccaagacg ccatccacgc cctttatgag aacgctgacc
     1321 gcgaaaaggc gatgcacttg ctgttgggac attttgccgg tcaccgcgac agtatgagtg
     1381 gctggccgaa tcataatgct cacaccgaga ctccccacac gcgcttggtc acaaccccga
     1441 tcgcgaaggt aatgcccaca gccgccgcgg tgatgagcag gttggtgacg acccggcgtt
     1501 tgatactcat ccccgagaga aacgcgacaa tgatcgagac gatgacgatt agactacccg
     1561 cggtaaacag cgacggaaat accgtccttg ctccaccgag cactggcaac agtgggacta
     1621 gggcgccggc caaatagctc acaccgacaa tggttgcaga aaccagcggc ttttctgccg
     1681 tcccgatcgc tgacatgctc tcacccagaa accgccgcct cgcaacctca gttgtgcgga
     1741 cctccgactc cgagctgacg gcgatccagg ccccggccgc catcgacaag gcgccggcta
     1801 cggacacggt gagccccgca accaggacgg cgagtgaatt cccaaatgcc gcgaaaaagc
     1861 cgcttacggc acccacaatc tcgaccaggc cgtcgttcag tccgagaaag atgtctcgca
     1921 cgccctccgg attgatttgt cgctgtgtcg ttccagtcac gacctcatct tcatgtttga
     1981 actcgtcctc gaggatattc cgaaccgccg cacccagcgg tccattgccg taggcgctcc
     2041 agaccctcag atacttccgc acaccgtgga cctctatcgc ctccagcacg agatgaatcg
     2101 cgggcgcgcc gaaaagccgg cagatggcca cgagtaacac gagtttcagc cgtctagcca
     2161 ggtcgagcgc ttctacgtgc agatcgaaaa aatcttgcca gaaggcgaag tgacgttgct
     2221 cgatagggat cagctg
//
LOCUS       DATILV010000478         3985 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3434540, whole genome shotgun sequence.
ACCESSION   DATILV010000478 DATILV010000000
VERSION     DATILV010000478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3985)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3985)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3985
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3434540"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(231..1394)
                     /locus_tag="VLJ17_10820"
     CDS             complement(231..1394)
                     /locus_tag="VLJ17_10820"
                     /inference="COORDINATES: protein motif:HMM:TIGR03118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03118 family protein"
                     /protein_id="HSV23508.1"
                     /translation="MYQRMLQCGAAAVVAIAVASVAIAGDDNSRRERDAYVVTPLTSN
                     LAGHAVAQDVVLQNAWGIAFSPAGSPFWVNDNATGCSTLYDGTGAKITALQVSIPLPG
                     NVVPVTSCQPRDPNKPPNPSPAAPTGIVWNPSASFLVPGTKIPAVFIFSTEDGTISAW
                     AGGLNPADNAVIAADESSSGAVYKGLAFAVNAKGAFLFATNFSNGTVDVFGPNGADGM
                     FTKVTLDGDFADPEIPAGYAPFNIANIDGDLFVTYAKQNAEKHDDVAGPGHGFVDVFD
                     TDGHLIRRFESRGRLNSPWGLARASFAFGPFSGKILIGNFGDGRINVFNNDGRFVDQL
                     EDVHGRPLVIEGLWTLTLGGGRNSSPDTLYFSAGPNDETNGLFGTITLASSHH"
     gene            2034..>3985
                     /locus_tag="VLJ17_10825"
     CDS             2034..>3985
                     /locus_tag="VLJ17_10825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003566136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound PQQ-dependent dehydrogenase,
                     glucose/quinate/shikimate family"
                     /protein_id="HSV23509.1"
                     /translation="MTLINRIFAALVVLMGVGLLLGGLYLATLGGSLYYLLAGLAYLI
                     AGVLLWRREARGVWLLVLIAVLTIPWALWESGTFYWALFPRLLVPLALASLGLLLMPS
                     VLPEASRGTMRGLGILAVLLTLAFFALAFVAHGVVSPIPNSPYTQAAANIIPSDWSAY
                     GRTTAGTRYAPFTQINRDTVKDLKLAWTYHTGEKTSLEKTAVDSNTPLQIADTLYTCT
                     PDDRVAAVDADSGAERWKFDTHSSSPIWNRCRGLGYYKLKEAPADGVCAERIVNSTID
                     ARLFELDAKTGKPCPDFGSGGIVDLKQGMGEVKPGFYFQTSAPLVARDYIIIGGWVVD
                     NYSRGEPSGVIRAFDARTGALAWAWDLGNPELTGQPPEGQTYTRGTPNMWTTAAYDDQ
                     LGLIYAPLGNATPDFFGMGRPPHSDEYNSSLVALDVVTGRVKWKFQTVHHDIWDYDLP
                     SQPALVDLPDGKGGTIRGILQTTKRGQLFLFDRATGEPIADVAEKPVPTTGAAPEEEL
                     SSTQPYSVGMPTIGAERLTEKKMWGATMFDQLMCRILFKQLRYDGDFTPIGLTKALDQ
                     PGNIGGFNWGSTSYDPVNHLAYMNDIRIPNIFWLMKRDEFDVWSKTHKLEPSGHGPSP
                     QLGTPYGQAIYIWMSPIGVPCNQPPYG"
BASE COUNT          766 a         1180 c         1198 g          841 t
ORIGIN      
        1 ctccccgcaa agagccgcct tcgcggtgaa tttgaccata ccattttctc atgaccacag
       61 ggcccgccgc cggtgtcggt tatggagcca acctgaacaa cagccgccaa agacaggaat
      121 cggccgcgcg tggtctattg ctcgcagatc ctgcgcgtga tctctacccg cagagcaaga
      181 aagagaggcc ccgcttgcat gcagggccca gattatcatg cgattaagag ttagtggtgt
      241 gaagacgcga gtgtgatggt accgaacagt ccgttggtct cgtcgttcgg ccccgccgag
      301 aaatacagtg tgtccggact cgaattgcgt ccaccgccta gtgtcaacgt ccacaatcct
      361 tcgatgacca gcggcctccc gtgcacgtct tcgagctggt cgacgaatct gccgtcgttg
      421 ttgaacacgt tgatgcggcc gtcgccgaag ttgccgatca agattttgcc gctgaagggc
      481 ccaaatgcga atgaagcccg cgcaaggccc cacggtgagt tgagtcttcc gcgcgattcg
      541 aaacggcgaa tgagatgacc gtccgtgtcg aacacgtcaa cgaagccatg gccgggtccg
      601 gctacgtcat cgtgcttctc cgcattctgt ttcgcataag tcacaaatag gtcgccgtcg
      661 atgttcgcaa tgttaaatgg cgcatagcca gccggtatct ctggatcggc gaaatcgccg
      721 tcgagagtaa ccttcgtgaa cattccgtcc gctccgttcg gcccgaacac atccaccgtg
      781 ccgttactga agttggtcgc aaacaggaac gctcccttgg cattcaccgc gaaggccaga
      841 cctttgtaga cggcgccact cgatgactcg tcagcggcga ttaccgcgtt gtctgccggg
      901 ttgagcccgc ccgcccaggc cgagatcgtt ccatcttcgg tggaaaagat gaacactgcc
      961 ggaatcttgg tgcccggcac caggaaggat gccgacggat tccacacgat cccggtcggg
     1021 gccgccggag acggattggg tggcttgttc gggtcccttg gttggcagga cgtcactggt
     1081 acgacgttgc caggcagtgg gatggatacc tgaagggcgg taatcttcgc gccggtgcca
     1141 tcgtacagag tcgaacaacc tgtggcgttg tcgttgaccc agaaggggct ccctgcgggt
     1201 gagaaggcaa taccccaggc gttctgcaac acgacatctt gtgctacagc atggccggcg
     1261 aggttggatg tgagtggcgt gactacatag gcgtcgcgtt cccgtcgcga attatcatca
     1321 ccggcgatcg cgactgaggc cacggcaatg gcgacgactg ccgcggctcc gcactgcagc
     1381 atgcgctgat acatggatac tcccctttct gtgcgaatga tcggaaaccc agccttcggt
     1441 aagtcgcggc acacgctgtc gcctgttcaa tgttgccttg ggattcacgt cagatcactg
     1501 ttcccagatt cgggtgcgga cgtgagcgtg gcggatttca gaatcgaccc atttgcctca
     1561 cgggcctgca cattggcacc agcgcgccgg aacaggcgtg accatcggcg tagcggcttc
     1621 ggagcactcg gggagtgcct catctatatg tgaagcagcc tgattgcgac cctcggggag
     1681 gcctgggtaa gagtggaggg ccgcacctcc ttccggtctc aagctgcgct agatggcgcg
     1741 ctggcaatcg ccggaactgc ggtttggcat cggttcacgc tcaatggtgt cgggcaggtt
     1801 cgaggtggcg caatcgttct aaacctcacc gtctggcaat ccgccatacg gtgagccaca
     1861 cgcgagtatc cctgcgctac gttgtcactc cctcattaga acccagacga tgcgtgcgta
     1921 cgtcgccgcc aggtcggaat atcgcaacgg cattcacgaa gtgaatgccg gctgctcgaa
     1981 gacatcagta acatgccaag ggttaggtct gtcgacacta taggagcacg agcatgacct
     2041 tgatcaaccg cattttcgcg gccctggtgg tgttgatggg agtggggttg ttgctcggcg
     2101 gcctttacct cgccacgctc ggcggctcac tctactactt gttggccggc ttggcttatc
     2161 tgatcgcggg tgtcctactc tggcggcgag aggctcgcgg ggtatggttg ctcgtactga
     2221 tcgccgtgtt gaccattccg tgggccctgt gggagtcagg cacgttctat tgggccctgt
     2281 ttccacgcct tctcgttcct ttggcgttgg cgagcctcgg tttgctccta atgccgtcgg
     2341 tgttgcctga agcttcccgc ggcacgatgc gtggtctggg tatcctggcg gtcctgttga
     2401 cgttggcatt cttcgcgctt gccttcgtgg cgcatggcgt cgtttcgccg attccgaatt
     2461 cgccttatac gcaggcggct gcaaacatca ttccttcgga ttggtctgcg tatggtcgta
     2521 ccacagcggg tacgcgttat gcgccattca cgcagatcaa ccgtgacacc gtgaaggatc
     2581 tgaagcttgc ctggacctac cacaccggcg agaagacttc gttggagaag actgccgtcg
     2641 attcgaatac gcctttgcag atcgccgaca cgctgtacac ctgtacaccc gatgatcgcg
     2701 ttgccgcggt agatgcggat tcgggcgcgg agcgctggaa gttcgatacc cacagttcct
     2761 cgccgatctg gaatcgctgc cgtggcttgg gttactacaa gctcaaggaa gccccggcgg
     2821 acggggtatg cgccgagcgc atcgtcaatt ccaccattga cgcgcgtctg tttgagctcg
     2881 atgcgaaaac cggcaagccg tgcccggatt tcggcagcgg tggcatcgtc gatttgaagc
     2941 agggcatggg cgaggtcaaa cccggattct acttccaaac ctcggcgccg ctggtcgcgc
     3001 gagactacat catcattggc ggttgggtgg tcgacaacta cagtcgcggc gagccatcgg
     3061 gcgtgatccg cgccttcgat gcgcgcaccg gtgcgctggc atgggcgtgg gacttgggca
     3121 atcccgaact taccggccag ccgccggagg gccaaaccta tacgcgtggc acgccaaaca
     3181 tgtggactac cgcagcctac gacgaccagc tcgggcttat ctatgcgccg ctcggcaatg
     3241 caacgcctga cttcttcggg atggggaggc caccgcactc ggatgaatac aactcgtcac
     3301 tggtggccct cgatgtcgtg acgggacgtg tgaaatggaa attccagacc gtccatcacg
     3361 acatctggga ttacgatctg ccctctcaac ccgcgctggt cgatctgcct gatggcaagg
     3421 gcggaacgat ccgcggcatc ttgcaaacca cgaagcgcgg ccagttgttc ctcttcgatc
     3481 gggcgacggg cgagccgatc gcggacgtgg ccgaaaagcc cgtgccgacg acgggtgccg
     3541 cgcccgaaga agagctctcg tccacgcagc cctattcggt cggcatgccg accatcggcg
     3601 ccgaacggct caccgagaaa aagatgtggg gcgcaaccat gttcgatcag ctcatgtgcc
     3661 gcattctgtt caagcagcta cgatacgatg gcgacttcac tccgatcggc ctgacgaagg
     3721 cgctcgacca gccgggcaac atcggcggct tcaattgggg aagcacgtcc tacgatccgg
     3781 tcaatcatct ggcttacatg aacgacattc gtatcccgaa tatcttctgg ttgatgaagc
     3841 gtgacgagtt tgatgtctgg tcaaagactc acaagctcga gccgagcgga cacggtccgt
     3901 cgccccagtt aggaactcct tacggtcagg cgatctatat ctggatgtcg ccgatcggcg
     3961 tgccttgcaa ccagccgccc tatgg
//
LOCUS       DATILV010000479         4164 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_622984, whole genome shotgun sequence.
ACCESSION   DATILV010000479 DATILV010000000
VERSION     DATILV010000479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4164
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_622984"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1531
                     /locus_tag="VLJ17_10830"
     CDS             <1..1531
                     /locus_tag="VLJ17_10830"
                     /inference="COORDINATES: protein motif:HMM:NF012485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type II and III secretion system protein family
                     protein"
                     /protein_id="HSV23510.1"
                     /translation="GVFALPAVLASLAIAILPGAIGDAHAQRMLAIAAPKRTASVSVA
                     VGKSQDIGTDSSFMDILVGDPEIADVNPLTDKMISILGKKIGTTRVSLYDESKKLVGI
                     FDVEVSYDVSKLREELGRHFRQAKIKVSTANGRVLLSGTAPDGIVLDGILSVARQFAP
                     DVINSIQVAQPQQVMLEVRFVEAARSAGRDLGVQWNLFNRGRTTRFLGNIGDGTPNTQ
                     LPITNGKVGGQGDGVSCGGGLNISCSGLTVSPFISAGVLSASAPFGFLVGKLLAAGLE
                     ADVLLNALETKGLARGLAEPNLVALSGDTANFLAGGEYPIPVPGTMGQISVEYKRYGV
                     GLAFTPTVLSRGLINLKIEPEVSQLDTSHSVAVGNGVSVPALTVRRASSTIELRDGQS
                     FVLAGLLQNSSNTAQDQLPWIGDVPVLGALFSSKSYQKNETDLIIIVTPHIVQPTRPG
                     DIVRTPLDNTLPANDIDFFLFGKAEVARRENRRGEAKFGQGPMGHVLDLPKGENHASL
                     Q"
     gene            1515..1910
                     /locus_tag="VLJ17_10835"
     CDS             1515..1910
                     /locus_tag="VLJ17_10835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23511.1"
                     /translation="MRRCNDMPAARAVTAVVGLGIIVAGCSDIYFDRRETIMFGADDA
                     LASNMAAQTIDPWPASSIDRRAPANGDRVAAAIKRYRTGRVFIPIGNATSTSYQQQQQ
                     QMMSQDAPPATSSGASAATAPTSNNGQAK"
     gene            1970..3205
                     /locus_tag="VLJ17_10840"
     CDS             1970..3205
                     /locus_tag="VLJ17_10840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator receiver protein"
                     /protein_id="HSV23512.1"
                     /translation="MLKKGMKPAATKTRVEVLTVDKEFEQSLRDAFAAGGTIDLDLVV
                     GTVSESEDAIGHDSVTVAVIDIDSRDEKEMVALERLATRLAGWPPIVVVLPSFDKDTV
                     RRLMQMRVADFLVKPVQPIELVRTCARVVQAPKGADRTEAEIFTYIPAIGGAGVTTLA
                     IQTALLLLGSGDQKARPSTCLVDLDFQHGACAHYLDLEPRLDLKEIEPRPERLDRQLL
                     EVMLSYHASGLAVIAAPNRPAEMRTFDPEMVTRLLDLVSANFKYVVMDMPRTWFPWTD
                     SVLLGSNQLYVVCEMTVPGIKHAKQLVTAIRERLEAGAHPKVIVNRYHQSMFGSGLRR
                     NDIIQAFGADLAAVIPNCYRLVREAIDRGVPLDEVQSGNKITQELKRLVMSARSTAGT
                     NSASGATVPEKKLNVSWAQ"
     gene            3264..>4164
                     /locus_tag="VLJ17_10845"
     CDS             3264..>4164
                     /locus_tag="VLJ17_10845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015887177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HSV23513.1"
                     /translation="MAGRFSFHRTAAPTPAPAELDNPQSAAVTSEATTLLTAAAAANA
                     EPPAPAIANPNPLLSDKLLDAKLRLHRRLIEEVNLSALEKLPEDAMRKHVVQLVSQYI
                     ITERLALNAQELAEFVSEILDEMVGLGPLEPLLKDPTIADILINGHECIYVERQGLLE
                     RSTIRFKDEPHLLRIINKIVSAVGRRVDEMHPLCDARLLDGSRFNVAIRPVAVDGPLV
                     SIRKFSKKPLHLNRLVDVDALRPQMAELLAAAVKARVTCVISGGTGSGKTTMLNALSA
                     FISDKERLITIEDAAELQLQQPHV"
BASE COUNT          854 a         1259 c         1239 g          812 t
ORIGIN      
        1 cggcgtgttc gcattgccgg ccgtgctcgc gtccctcgcc attgcgatat tgccgggcgc
       61 aataggcgac gcccatgcac aaagaatgct tgcgattgct gcccccaagc gcaccgcgtc
      121 ggtaagcgtg gcggtcggca aatctcagga catcgggacc gattcgagct tcatggacat
      181 cctggtcggc gatcccgaga tcgccgatgt caatccgctg accgataaaa tgatatccat
      241 tctcggtaag aagatcggca ccacgcgcgt atcgctctat gacgaaagca aaaagctcgt
      301 cggcatcttc gacgtcgagg tttcctatga cgtttcgaaa ctccgcgaag aactggggcg
      361 gcattttcgc caggccaaga tcaaggtgtc aaccgcgaac ggccgcgttc tcttgtcggg
      421 cacggcccct gacggcatcg ttcttgacgg catcttgtcg gttgcacgcc aattcgcgcc
      481 tgacgtcatc aactcgatcc aggtcgccca gccgcaacag gtgatgctgg aggtacgctt
      541 tgtcgaggct gcccgaagcg ccggccgcga cctcggtgtg cagtggaatc tgttcaaccg
      601 cggcaggaca acgcgcttcc tcggcaatat cggtgacggc acccccaata ctcagcttcc
      661 catcaccaat ggaaaagtcg gcggacaggg cgacggagtt tcctgcggcg gcgggctgaa
      721 catatcgtgt tcggggttga cagtttcgcc gttcatttcc gccggggtgt tgtcggcatc
      781 ggcgcctttc ggattcctgg taggcaagct gcttgccgcg ggcctcgaag ccgacgtcct
      841 gctcaatgca ttggagacga agggcctggc gcggggactt gcggagccga acctggttgc
      901 gctttcaggc gacaccgcga attttcttgc gggtggcgaa taccctattc cggtgccggg
      961 tacgatgggg cagatttcgg tagagtacaa acgctacggc gtcgggctcg cattcacccc
     1021 gaccgtgctc agccggggac tgatcaatct caagatcgaa cccgaagtga gccaactcga
     1081 cacgagtcac agcgtcgcgg tagggaacgg cgtcagcgtc ccggcgctca cggtgcgccg
     1141 cgcctccagc accatcgagt tgcgcgacgg ccagagcttc gtcctggcgg gtctgctgca
     1201 aaactcctcc aacaccgcgc aagaccaatt gccatggatc ggcgatgtac cggtgcttgg
     1261 cgcgctattt tcgagcaagt cctatcagaa gaatgaaacc gatctcatca tcatcgtaac
     1321 gccgcacatt gtgcagccga cgcggccagg cgatatcgtc agaacgccgc tcgataatac
     1381 gctgcccgcc aacgacatcg acttcttttt gttcggcaag gcggaagtcg caaggcgaga
     1441 gaaccgtcgt ggcgaggcaa agtttggcca gggcccgatg ggccacgtgc ttgacctacc
     1501 aaagggggag aatcatgcgt cgttgcaatg acatgccggc ggcacgtgct gtcaccgcgg
     1561 tggtggggct cggcatcatc gtggcgggtt gctcggacat ctacttcgat cgccgggaaa
     1621 ccattatgtt cggcgccgac gatgcgctgg cgtccaatat ggcggcgcag accatcgatc
     1681 cttggccggc cagcagcatc gaccggcgcg ctccagcaaa cggcgaccgg gttgcggcgg
     1741 cgatcaaacg ctatcgcacc ggacgagtct ttattccaat cgggaatgcg acctccacgt
     1801 cgtaccaaca gcagcaacag caaatgatgt cgcaggacgc tccgccagcg acgagttcgg
     1861 gtgcaagcgc cgcgaccgcg ccgaccagca acaacggcca ggcaaagtaa agatacctgg
     1921 cgcgaaatgt cgggtggccg ccggtggacc aacttacggg ctttcgacaa tgctcaagaa
     1981 agggatgaaa ccagcagcga ccaaaacgcg ggtggaggtg ctcaccgtag ataaggaatt
     2041 tgagcaatct ttgcgcgacg cgtttgcggc gggcggaacc attgatcttg acctcgtcgt
     2101 cgggaccgta tcggagtccg aagatgcaat cggtcacgac agcgtcacgg tggcggtgat
     2161 cgacatcgac tcccgtgacg agaaggaaat ggtggcgctg gaacggcttg caacgcgtct
     2221 tgccgggtgg ccgccgatcg tcgtggtgct gccgtcgttc gataaagata cggttcgacg
     2281 gttgatgcag atgcgggtcg cggatttcct cgtcaagccg gtgcagccga ttgagctagt
     2341 gcgcacctgc gcacgggtcg tccaggcccc caaaggggca gatcggaccg aagcggaaat
     2401 tttcacctat attcccgcca tcggcggcgc gggcgtcact acactggcaa tccaaaccgc
     2461 gcttcttctg ctcggcagcg gcgaccagaa ggcgcgtcca tccacttgcc tggtagacct
     2521 cgatttccag cacggtgcct gtgcgcacta tctcgacctt gagcctcgtc ttgaccttaa
     2581 ggagattgag ccgcgaccgg agcggcttga tcgtcagttg ttggaagtca tgctgtccta
     2641 tcatgcttcc gggcttgccg tgatcgccgc gccgaaccgg ccggcggaga tgcggacatt
     2701 cgatcctgag atggtcacgc ggctgcttga cctcgtttcc gcgaacttca aatacgtcgt
     2761 tatggacatg ccgcgtacct ggtttccatg gaccgacagc gtgctgcttg gatcgaacca
     2821 gctctatgtc gtgtgcgaaa tgacggtgcc gggtataaag cacgccaaac agctcgtcac
     2881 cgcgattagg gaacgtctgg aagcgggcgc gcatcccaaa gtcatcgtga accggtacca
     2941 tcagagcatg ttcggatctg gcttgcggcg caacgatatc atccaggcgt tcggcgcgga
     3001 cctcgccgcc gtcatcccca attgctatcg gcttgtccgc gaagcgatcg accgcggcgt
     3061 tcctctggat gaagttcagt ccggcaataa gatcactcaa gagcttaaac ggctcgttat
     3121 gtcggcgcgg agcacagccg gcaccaattc ggcatccggt gccacagtgc cagagaaaaa
     3181 attgaatgtg tcctgggcgc aataggtacc ggcattgccg atcacgacgt cgtcaatcag
     3241 ttacagcgct ttcgaggcaa tgaatggccg gccggttcag ttttcatcgc acagcagcgc
     3301 caacaccggc tccggcggaa cttgacaatc cgcagtcggc tgccgtcacc tcggaagcga
     3361 cgacgctcct cacggcagca gccgcggcca acgctgagcc gccggcgccg gccatcgcca
     3421 atcccaatcc cctgctgtcc gacaaacttc tcgacgccaa gttgcgcctc caccggcgtc
     3481 tgatcgagga ggtaaatcta tcggcgctgg aaaagctgcc cgaggacgcg atgcgcaagc
     3541 acgtcgtgca gctcgtgtcc caatatatca tcaccgagcg cctcgcgctc aatgcccagg
     3601 agctcgctga attcgtaagc gaaattctcg atgaaatggt tggattgggg ccgctcgaac
     3661 ccttgttgaa ggaccccacg atcgccgaca tcctcatcaa tggccatgaa tgcatctacg
     3721 tagaacgcca ggggctgctg gaacgcagca cgatccgctt caaggacgag ccccatcttc
     3781 tacgtatcat caacaagatc gtttcggcgg tggggcgtcg ggtcgacgaa atgcatcccc
     3841 tgtgcgatgc acgtctcctc gatggttcac gtttcaatgt tgccatccga cctgtcgcgg
     3901 tagacgggcc gctggtttcg atccgcaagt tctcgaaaaa gccgcttcat ctcaaccgcc
     3961 tcgtggacgt ggatgctttg cgcccacaga tggctgaact tctggcggca gccgtcaagg
     4021 cgcgcgtcac ctgcgtaatt tccggcggca ccggttccgg caagaccacg atgctcaatg
     4081 cgctctcggc gttcatatca gataaggagc gtctcattac gatcgaggat gcagccgaat
     4141 tgcagctcca gcaaccacat gtgg
//
LOCUS       DATILV010000480         2291 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_368060, whole genome shotgun sequence.
ACCESSION   DATILV010000480 DATILV010000000
VERSION     DATILV010000480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2291)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2291)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2291
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_368060"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(26..316)
                     /locus_tag="VLJ17_10850"
     CDS             complement(26..316)
                     /locus_tag="VLJ17_10850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HSV23514.1"
                     /translation="MTGTARSSAGLDERRRRLLYRLWHRGTREMDLIMGRFADAAVGE
                     LMEAEIAELERLADVPDPELYAWLTGGRPVPDDYNLTVFRRLRDFHALRPIE"
     gene            558..1643
                     /locus_tag="VLJ17_10855"
     CDS             558..1643
                     /locus_tag="VLJ17_10855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23515.1"
                     /translation="MTEPSPATAVDMDDIASPHGMNGSYKGLRFAIVGDSAPCEQNAT
                     VITHPSTPTGDTVAGGSWPAPAPEGAASTTGAAGPSAQAAPTPEPPASVIRVYDIRKG
                     QQDNRGETIDLVFFKRPEFAIYQSGGKILVQYADDEALAKEQIAKIAELLPLKDRLQY
                     LVQNMDQPERYHWQIAESLRLGLYGQKDPAKNIMQGAIDDINAMRLRNGRVSYLVATL
                     IFVTFIVLVAFITSIAIHGSWFAQIESSHKPDFLRLDLAVASGAVGALFSCVWQLRAR
                     TVATDGDILSNAVDSLARIVIGMVSAVALLLVIISDFTGKIAPIVSDPLLDWKSVLVV
                     GLLAGFVERLVPDLLEKRLAPIASRST"
     gene            1836..>2291
                     /locus_tag="VLJ17_10860"
     CDS             1836..>2291
                     /locus_tag="VLJ17_10860"
                     /inference="COORDINATES: protein motif:HMM:NF025878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23516.1"
                     /translation="MRILPVKPPEMLSRSNLRPLHRFPLIDTHSPDEFRETLVANFGA
                     LGFDLQADASEFEATRSYLRLKSVDLIFGTSSAAYRVRFPGVPLVKQHFVRQNAGRTI
                     FGGNQFNINPNEAAVIPAGVEMTHEYQAGFEQFLFRVEASALQAKLSAVV"
BASE COUNT          474 a          669 c          662 g          486 t
ORIGIN      
        1 gaacgcgccc tggtgagcga aatgttcatt cgatcggcct caaggcatga aaatcccgta
       61 agcggcggaa taccgtcaga ttgtagtcgt ctggaaccgg acggccgccg gtgagccaag
      121 catagagctc ggggtccggc acatcggcga gccgctccag ctcggcgatt tccgcctcca
      181 tcaattcgcc gaccgccgca tcggcgaaac gacccataat caggtccatt tcccgcgtgc
      241 cgcgatgcca caagcggtac aataaccgcc gccgccgctc atctagtccc gcgctcgatc
      301 gtgccgtccc agtcatcaca atcccctgcc cggcacgaag ctcgcggccg gataaacgcc
      361 aaaagcccgg acgggtgccg ggcgcgggtt ttcatatagc gaccggagct ggcgttgtca
      421 ggggggccca aaaagcctcg ttgcggttct caattaccgc gcgatttgaa tacgtcggaa
      481 acttgtattt gaaccgatgg caacctctgg gtgacacatg aatggccatt aagtttgtcg
      541 atgccaggga gacgaatgtg accgaaccga gccccgcgac cgctgtggat atggacgata
      601 tcgcttcgcc gcacggaatg aacggttcgt acaagggatt gcggtttgcg atcgtcggag
      661 acagcgcgcc gtgcgaacaa aacgccactg tcatcacgca tccatccacc ccaacgggcg
      721 ataccgtagc tggcggatcc tggcctgcgc ctgctccgga gggcgccgca tcaacaactg
      781 gtgcggcagg gccaagcgcg caagccgcgc caacgcccga gccgccggcc tcggtgatcc
      841 gcgtttacga tatccgcaag ggccagcaag acaatagagg cgaaacgatc gatctggtgt
      901 tcttcaagcg accggaattc gcaatctacc aatccggcgg caagattttg gtgcaatacg
      961 ccgacgacga agctttggcc aaggagcaaa tcgccaagat tgccgaattg cttcctctga
     1021 aggaccggtt gcaatatctg gtccagaata tggatcagcc cgaacgctat cattggcaga
     1081 tcgcagaatc gttgcgattg ggcctttacg gtcaaaagga ccctgccaag aacatcatgc
     1141 agggcgcgat tgacgatatc aatgcgatgc gccttcgcaa cgggcgggtc agctaccttg
     1201 ttgccacact gatattcgtg actttcatag tgttggtggc ctttattacg tcgattgcga
     1261 tccacggatc gtggttcgct caaatagaat catcccacaa accggacttt ttgcgtctcg
     1321 atttggccgt cgcaagcgga gccgtcggag cgctgttttc ctgtgtctgg caattgcgcg
     1381 cccgcactgt ggccacggac ggagatatat tgtcaaatgc ggtggacagc ctggcgcgga
     1441 tcgtgatcgg catggtttcg gcagtggctc ttctcctggt tatcatctcg gactttaccg
     1501 gcaagattgc tcccatcgtt tccgaccctt tgctcgactg gaagagcgta ttggtggtcg
     1561 ggttgctggc gggtttcgtt gaacgcctgg tgccggatct gctggagaaa aggttggcgc
     1621 cgatcgcgag cagatcgacc tgagctgtac accgcggttt cgcctgctcc ggtgtcagtc
     1681 ccgcgaaagc aggaatctgg tattccatcg ccgcggtgac gggatcgccc gcctgagact
     1741 gtcctttggt gcaggttgac gggcggtgac acggcacttc agaattcgct ctgttgcgct
     1801 agggtttgtc gaggcttata agattaagaa atcgcatgcg tatcctaccc gtaaagcctc
     1861 ccgaaatgct cagtcgatcc aatctgcgac cgctgcaccg gtttccactg atcgataccc
     1921 atagtccaga cgaattccgg gagacacttg tcgccaactt tggagccctc gggttcgatc
     1981 tccaagccga cgcatcagaa ttcgaggcta cgaggagtta tcttcggctc aagagcgtcg
     2041 atcttatttt cggcaccagc tcagcggcct atcgggtccg cttccccggc gtgccgctgg
     2101 tcaagcagca cttcgtccgc cagaatgcgg ggcgaacgat ctttggtggc aaccagttca
     2161 acatcaaccc gaatgaggcg gccgtcatcc ctgccggtgt cgagatgacg cacgaatatc
     2221 aggcgggctt tgagcaattt cttttccgcg tcgaggcttc agcgttgcag gccaagctca
     2281 gcgccgtggt c
//
LOCUS       DATILV010000481         4292 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3691776, whole genome shotgun sequence.
ACCESSION   DATILV010000481 DATILV010000000
VERSION     DATILV010000481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4292)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4292)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4292
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3691776"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..659
                     /locus_tag="VLJ17_10865"
     CDS             <1..659
                     /locus_tag="VLJ17_10865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HSV23517.1"
                     /translation="CIGNVRNFIAIGLNYSDHAAEGGNPIPKEPVIFNKAPSCICGPN
                     DNTMIPKESTKLDYECELAIIIGKRARYLSKDKAMDVVAGYCIGNDVSEREFQLEHGQ
                     TIAKGKGCETFGPLGPWFVTKDEIRDPQRIAMWTDVNGEKRQRGNTSNMIFDCRHIVW
                     YCSQLFVLEPGDVIVTGTPAGVGLGRKVEPKYLQAGDVVTLGIEGLGEQKQRIVPFKM
                     "
     gene            complement(663..1979)
                     /locus_tag="VLJ17_10870"
     CDS             complement(663..1979)
                     /locus_tag="VLJ17_10870"
                     /inference="COORDINATES: protein motif:HMM:NF012885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23518.1"
                     /translation="MATQPWKTEDWFVSEWNYAPEVTKDFKFAKNIKIHDVTLRDGEQ
                     QTGVILSKDEKIRIAEALAEAGVHRIEAGMPIVSPSDNDAIKEIVKRNLGPQIFSFAR
                     CMKEDVKRAIDTGVNGVVMEIPSSKHMVDLAYRWPMEKAIETSIEATKYAHDNGLEVV
                     FFPIDFSRAELKWALDLIERVSKDGHMDALALVDTFGVVSPHAMRYFVREVQKRIKKR
                     LEAHFHQDFGMGVANTIMALAEGVEVMHTTVLGVGERSGNAPMEEIVMALKTMYNVDV
                     GIDTTKLTSLANLVQRLTGVVVPTNKAIVGSGLYQIESGIIASWFKNCGEKYATELFP
                     IRWSAVGQPPAEVVMGKGSGIDSVNIWLQQLGMQVSEEDALKIMAAVKAYSLKNKKML
                     TRGEFRDLAKSIINRAAAEHGNGVRQKAPGARSGAFVFLAPHDVYN"
     gene            complement(2156..3019)
                     /locus_tag="VLJ17_10875"
     CDS             complement(2156..3019)
                     /locus_tag="VLJ17_10875"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HSV23519.1"
                     /translation="MRIAAINSPQGKIFGVIQDDSFRSFSIGRASVRDLRHVIKLLGE
                     GTPPETNEPVALKNVKLAAPLGPLAKNVICVGKNYHDHAQEFARSGVDQSGDKQEVPA
                     DPVIFTKSTSSLADPFQKISASSDPTHTVDYEGELGVVIGKRCKNIKRAEALDYVFAY
                     TIVNDVTARAVQQRHKQWFLGKSLDGFCPVGPWLVTRDEFGVPDAQELATFVNGEPRQ
                     SAKLRDMIFDVPTFIETVTAYVPLEPGDLLATGTPAGVGIGFDPPRYLGPGDVVKISI
                     SGIGELTNPVV"
     gene            complement(3368..3604)
                     /locus_tag="VLJ17_10880"
     CDS             complement(3368..3604)
                     /locus_tag="VLJ17_10880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23520.1"
                     /translation="MTSTFLHEDKNVPPDEPVERDAPLCDCGQQMWLVRVDTQLSDGG
                     TRSTYDYECGSCGAKRSLRTVSEVIKPPSVVAVE"
     gene            3806..>4292
                     /locus_tag="VLJ17_10885"
     CDS             3806..>4292
                     /locus_tag="VLJ17_10885"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV23521.1"
                     /translation="MRTIMWLAFGALGVALSAPAKAENIKIGILIPYSGANADLGDVQ
                     DKAFDLYMKLHAKDIAPHTVELIKRDEGPPSGANAKTAATELITRDKVNLILGVVYSP
                     SAIAMAPVVTQAKVPFVIANAGTAWITQLSPYIVRFSFSMWHDGYAMGTYAQDKLKCK
                     TA"
BASE COUNT          857 a         1237 c         1266 g          932 t
ORIGIN      
        1 cctgcattgg caacgtgcgt aacttcatcg ccattgggct caactactca gatcatgcgg
       61 ctgagggcgg aaatccgatc ccgaaagagc cggtgatctt caacaaggcc ccgagttgca
      121 tctgcgggcc aaacgacaac accatgattc ccaaggagtc gaccaagctc gactacgagt
      181 gcgaactcgc cattattatt ggcaagcgtg cccgctattt gtcgaaggac aaggcaatgg
      241 acgtggtcgc aggctattgc atcggcaacg atgtatcgga gcgcgaattt cagctcgaac
      301 acgggcagac cattgccaag ggcaagggct gcgagacctt cggtccgctc ggtccctggt
      361 tcgtcaccaa agacgaaatc cgcgacccgc aacgcatcgc catgtggacc gatgtcaatg
      421 gtgaaaaacg ccagcgcggc aacacgagca atatgatatt cgattgccgc catatcgtct
      481 ggtattgttc gcagttgttc gtgctggagc cgggtgacgt gatcgttacc ggaacacccg
      541 caggtgtcgg acttggccgg aaagtggagc cgaaatattt gcaggccggc gacgtggtca
      601 cactcggcat cgaaggccta ggcgagcaaa agcagaggat cgtgccgttc aagatgtgag
      661 tttcagttgt atacgtcatg cggcgctagg aaaacaaaag ccccggagcg tgcgcccggg
      721 gctttttggc gtacgccgtt gccgtgctcg gcggccgcgc ggttgatgat gcttttcgcc
      781 agatcgcgga actcgccgcg ggtcaacatc ttcttgttct tgagcgagta ggccttgact
      841 gccgccatga tcttgagggc gtcctcctcg gatacctgca tgccgagctg ttgcagccag
      901 atattgaccg agtcgatgcc gctgcccttg cccatcacaa cttcagccgg cggctggcca
      961 acagcgctcc agcggatcgg gaacagctcg gtggcgtatt tctcgccgca gttcttgaac
     1021 cagctggcga tgatgccgga ctcgatctga tagagcccac tgccaacgat cgccttgttg
     1081 gtcggcacca ccacgccggt caggcgctgc accaagttgg cgagcgaggt gagcttcgtt
     1141 gtgtcgatgc cgacgtcgac attgtacatg gtcttcaatg ccatgacgat ttcttccatc
     1201 ggcgcattgc cggagcgctc gccgacgccg agcacggtcg tgtgcatgac ttcgacgcct
     1261 tccgccagcg ccatgatggt gttggcgaca cccatgccga agtcctgatg gaagtgcgcc
     1321 tccaggcgtt tcttgatgcg cttctggacc tcgcggacga agtagcgcat ggcgtgcggc
     1381 gacaccacac cgaacgtatc gaccagcgcg agcgcgtcca tgtgtccgtc cttgctgacg
     1441 cgctcgatca gatcgagcgc ccacttcagc tcggcacgcg agaagtcaat cgggaaaaac
     1501 acaacctcga gcccgttatc gtgcgcgtat ttggtggcct cgatcgaggt ttcgatcgct
     1561 ttttccatcg gccagcggta ggcgagatcg accatgtgct tgctggacgg gatctccatc
     1621 accacgccgt tgacgccggt gtcgatggcg cgcttgacgt cttccttcat gcagcgcgcg
     1681 aaagagaaaa tctgcggccc cagattgcgc ttgacgatct ccttgatcgc gtcgttgtcg
     1741 gacggagaga cgattggcat accggcttcg atccggtgca cgccggcctc tgccagcgcc
     1801 tcggcgatgc ggatcttctc gtctttgcta aggatgacgc cggtttgctg ttcgccgtcg
     1861 cgcaaggtga cgtcatgaat cttgatgttc ttcgcgaact tgaagtcctt ggtgacctca
     1921 ggcgcataat tccattcgct gacgaaccag tcttccgttt tccagggttg agttgccatt
     1981 cgttactcct ctcgcgtggg gtgttttggg gtgattattg cggcaattgt cccgggcagc
     2041 catgccatgc ggcgctcagc taggaaatgg ctttcggtgc cggcagcatt ggtttttcgc
     2101 aaaggctggt cgattttccc tgcttgtcgt gagccttata aggggtgacg gcggctcata
     2161 ccactgggtt ggtgagctca ccgatcccgg aaatggatat tttcacgacg tccccgggac
     2221 ccaggtagcg cgggggatca aagccgatac cgacgccggc gggcgtgccg gtcgcgagca
     2281 agtcgcccgg ctctagcggg acataggccg tgaccgtctc gataaacgtc ggcacgtcaa
     2341 agatcatgtc gcgtagcttt gccgactgcc ggggttcccc attcacgaaa gttgcaagct
     2401 cctgggcatc cggtacgccg aattcatcgc gcgtcacaag ccacggtccg actggacaaa
     2461 agccatccag gctcttgcca agaaaccact gtttgtgacg ctgctgtacg gcgcgcgcgg
     2521 tgacgtcgtt gacaatggtg taggcgaaaa cgtaatcgag cgcctcggcg cgctttatgt
     2581 tcttgcaacg tttaccgatc acgacgccaa gctcgccttc gtagtccacc gtgtgggtcg
     2641 ggtcggacga ggctgagatt ttttggaacg gatcggcgag cgaggaggtg gacttagtga
     2701 agatgactgg atcggctggg acttcctgct tgtcgccgga ttgatcgacg ccgctgcggg
     2761 caaattcttg ggcatggtca tgataattct tgccgacgca gatgacgttt tttgccaatg
     2821 gcccgagcgg cgccgcaagc ttgacgttct tgagcgcgac tggctcgtta gtttctggag
     2881 gcgtcccctc accgagcagc ttgataacat gacgcaagtc gcgcaccgat gccctgccaa
     2941 tcgaaaaaga acgaaagctg tcgtcctgaa ttacgccaaa tatcttgccc tgcgggctat
     3001 tgatggctgc aatgcgcatg gtccggcaat taccttttca taatggtcga tgaagttcgt
     3061 gatgtgggac taggcgctag caaagacggc ggccgccttc aaggcaagag ggtcgattag
     3121 gcccagacgc acggccattt gcgcgattgg accatggttc gtcacaagga aaagcacggc
     3181 gagcgacggc agagggcggt cgcggcggaa taaaaactgt ggacgggtgg ccatcaaaaa
     3241 accccggatg gtttgcccgg ggttttcgtt tcctgtggtc agtgcctagg gcgctacgga
     3301 cttccgcttt cggcgccacc cagagtagcc aaagatgcca cgctcggaac ggggattttc
     3361 cgaagcacta ttcaaccgcg acgacggacg gcggttttat gacttccgac accgtccgca
     3421 gcgagcgctt cgcgccgcaa ctgccgcact catagtcata tgtggaccgg gttcccccat
     3481 ccgacagttg ggtgtccacg cgaaccaacc acatttgctg gccgcagtcg cacagcggtg
     3541 cgtctcgttc gaccggctca tccggaggaa cgtttttatc ctcgtgcagg aatgtcgaag
     3601 tcattttttc tgctccgatg cattaatgac caatgacccc cggagttccc actcgtccgc
     3661 acgatagttg ggcgcggacc caccgccacc cattggtgaa attggcaact acggccgcct
     3721 ggatcgctat ttgctcaccc gcactggctg ttatagttcc cctcaaggac actgagaacg
     3781 tccaatatgt cttgaggggg gtacgatgcg aaccataatg tggctggctt ttggcgccct
     3841 tggcgtcgct ctgtccgcgc cggcgaaggc cgaaaacatc aaaattggga ttctgattcc
     3901 ctattcgggc gccaatgccg atcttggcga tgtgcaggac aaggcctttg acctgtacat
     3961 gaagcttcat gccaaggaca tcgcgccgca taccgtcgaa ctcatcaagc gcgacgaggg
     4021 cccgccatcc ggcgcaaacg ccaagactgc cgcaaccgag ctcatcacgc gcgacaaggt
     4081 caatctcatt ctgggagttg tgtattcgcc atcagcgatc gccatggcgc ccgtggttac
     4141 acaggcgaag gtgcccttcg tcatcgccaa tgccggcacc gcctggatta cgcagttgtc
     4201 accctacatc gtgcgtttct cgttcagcat gtggcacgac ggttatgcga tgggtaccta
     4261 cgcgcaggat aaactcaagt gcaagacggc tg
//
LOCUS       DATILV010000482        13284 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2925584, whole genome shotgun sequence.
ACCESSION   DATILV010000482 DATILV010000000
VERSION     DATILV010000482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 13284)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13284)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13284
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2925584"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            197..1171
                     /locus_tag="VLJ17_10890"
     CDS             197..1171
                     /locus_tag="VLJ17_10890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014497229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HSV23522.1"
                     /translation="MLSVNVPRGTTLARINFDADGQVPDGAVWLDLYGPTLAENKLVE
                     RALGIAVPTREEMQEIEVTSRLYVEGGARYMTATLMCHSDTDIPRTTPVTFILSGHRL
                     VTVRYDEPKPFTIVGAKLARVCPANVTGETVLMDLLDAVIDRVADILERIGSDVDGIS
                     HEILESEGGMSRGYSFKEILKSIGRRGDHTSKARESLVSIGRLLLYLAAEADIMKWAK
                     DQRATIKGMQRDVQSLSDHATYLSQKISFLLDAMLGVVSLEQNNIIKIFSVAAVVFMP
                     PTLIASIYGMNFKHMPELEFDYGYPLAIALMLLAAVLPYFFFRWMKWL"
     gene            1267..1650
                     /locus_tag="VLJ17_10895"
     CDS             1267..1650
                     /locus_tag="VLJ17_10895"
                     /inference="COORDINATES: protein motif:HMM:NF022461.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2846 domain-containing protein"
                     /protein_id="HSV23523.1"
                     /translation="MALAGCAASGVKSTDANVVESRLAPGKGRFYFYRGGSIAGVAVQ
                     LEIKLNNEPVGRAVPGGFFFADRPRGSYEASTATEIKACLRIDPGETKYVRVSISPGI
                     LVRHIQFELVDRAIAEVDLASLNKV"
     gene            complement(1784..2575)
                     /locus_tag="VLJ17_10900"
     CDS             complement(1784..2575)
                     /locus_tag="VLJ17_10900"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011471604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSV23524.1"
                     /translation="MRPVSQKSQPKHAMQNAPASNQPRRALLLTGASRGIGHATVKRF
                     AAAGWRVITCSRHAFPENCPWAMGPEDHIQVDLADPESTLGAIEEVKRRLGGELHALV
                     NNAGISPKSNGGSRMGTMDTTYAVWQQVFQVNFFAPIMLARGLVAELEAAKGSVVNVT
                     SIAGSHVHPFAGSAYATSKAALASLTREMASDFGPRGIRVNAIAPGEIDTAILSPGTD
                     KIVAQIPLRRLGTTDEVAKIIYVLCTEMSSYVNGAEVHINGGQYV"
     gene            complement(2735..3376)
                     /gene="pdxH"
                     /locus_tag="VLJ17_10905"
     CDS             complement(2735..3376)
                     /gene="pdxH"
                     /locus_tag="VLJ17_10905"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HSV23525.1"
                     /translation="MSDTVPIEHPAWLRSGDFTEADEPLRLFAAWFEDAKKAEPNDPD
                     AMALATVDADGLPNVRMVLLKGFDERGFVFYSNEDSRKGCELAANPKASLAFHWKSLR
                     RQVRLRGTVTTVSAAEADAYFATRPRSSQIGAWASKQSSPLESRHAFEKAIALNAAKF
                     ALGPVPRPPFWIGYRVTPTVMEFWHDRPYRLHDRIEFCRADAGAAWAKTRLYP"
     gene            3720..4064
                     /locus_tag="VLJ17_10910"
     CDS             3720..4064
                     /locus_tag="VLJ17_10910"
                     /inference="COORDINATES: protein motif:HMM:NF028308.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RT0821/Lpp0805 family surface protein"
                     /protein_id="HSV23526.1"
                     /translation="MPTRFELFGRDERTDSAIPLQNTGAFSSTDLAVASAATMALLEH
                     DGASGPWENPHTGARGTITPLATAYRDNGIECRDFLASYVREKAEAWMQGEACRNGSG
                     RWEVRTFKPWRR"
     gene            4200..5177
                     /locus_tag="VLJ17_10915"
     CDS             4200..5177
                     /locus_tag="VLJ17_10915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HSV23527.1"
                     /translation="MRDPYEVLGVKKNADAAAIKSAFRKLAKKLHPDANKADPKAAQR
                     FAEINSAYEILGEEDKRKAFDRGEIDAEGKPKFSGFEGFGPRGGFGRGGQDVNFEHFS
                     FGPEGVRRSGGQGGFSNFDDLLSGMFGGFANAPRGRGRGRGGFAPQDAESAGRDVTAE
                     VTISLAEAAKGGTRRVHLPTGKEVDVKIPAGLGAGRQIRLKGQGLPGPGGIGDALITV
                     TVAPHPYFVRDGDNLRVDVPITLYEAVLGGKVRVPTLDGAVELNVPAGTSSGRIFRIG
                     GKGMPAEGKAGDLYATVRIALPETGDGELEELMRKWRHHSPYNPRKDLK"
     gene            5310..6128
                     /gene="fabI"
                     /locus_tag="VLJ17_10920"
     CDS             5310..6128
                     /gene="fabI"
                     /locus_tag="VLJ17_10920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004318 - enoyl-[acyl-carrier-protein]
                     reductase (NADH) activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HSV23528.1"
                     /translation="MPETAGLMAGKRGLILGVANNRSLAWGIAKSARAHGAELAFTYQ
                     GDALKKRVEPLAVEVGGIVVGHCDVTNPASIDAVFATTAAKWGAIDFVVHAIAFSDRT
                     QLDGRYIETTQDNFVNTMVVSCYSFTAIAQRAEKLMPDGGAMLTLTYYGAEKWMPHYN
                     VMGIAKAGLEASVRYLAADLGSKKIRVNAISAGPIKTLAASGIGDFRYILSWNEHNTP
                     LRRNITADEVGDTAVYLLSDLSRGVTGEIHHVDAGYHIVGMKHPDAPDIAVRGD"
     gene            6151..6750
                     /locus_tag="VLJ17_10925"
     CDS             6151..6750
                     /locus_tag="VLJ17_10925"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HSV23529.1"
                     /translation="MSSPLLYFVRHGETDWNAERRLQGQLDIPLNDVGRRQSMQCGSV
                     LRDLLAARHKTPADFTFIASPLSRARETMEILRRALGLPSEGYAVDPRLVELSFGRWE
                     GLTYREVRSRDRAALAARERDKWNFATPEGESYAQLLMRVRDWHAGLTRDAVVSAHGG
                     VARALMVLFGVRTPEDAPHGEVVQGAVYEFGPGIMNRHG"
     gene            7011..8120
                     /locus_tag="VLJ17_10930"
     CDS             7011..8120
                     /locus_tag="VLJ17_10930"
                     /inference="COORDINATES: protein motif:HMM:NF028479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-alpha-hydroxyglycine alpha-amidating
                     lyase family protein"
                     /protein_id="HSV23530.1"
                     /translation="MLRLGRVGFMLIPTVIAAWCAVARAQQASLPKPTELPNPYRLVE
                     GWPTLPKTMNGGRWGEVIRVHVARNGNIWVFHRCFNIEPPGSATCINRGEANPPILEF
                     NPSGVLLRSFGVGLFAYPHGFTVDNDGNLWASDVNDSETVLGMSAKNAAGIAMGQEVL
                     KLSADGKVLMVLGKPGVAGNGPDTFDRPTGVAVAPNGDIFVSDGHHPNKFGTGRIVKF
                     TKDGQFTKTWGRKGAAPGEFDEPHDIFVGGSQNRIYVADRRNLRIQVFDQDGNFVVAW
                     HQFGQPSSVFVGQDDTIYVGASFPDPSAKKGELRGIVIGDAKDGSLKAFIPDPSDLDK
                     VVRGTSASGIAADDMGNIFAADVGTQNLRKYVKVK"
     gene            complement(8240..10081)
                     /locus_tag="VLJ17_10935"
     CDS             complement(8240..10081)
                     /locus_tag="VLJ17_10935"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSV23531.1"
                     /translation="MRQLFQACRLCFNMTGNRFSVTIEQRRNRLRESLQRDRLPIALV
                     AVSEHGELLGSASILKTTLTHQHLTPWLSSVFVPNELRRKGIASALSLRAIDEAHRIG
                     FERLYLFTPRSESLYARLGWQTFERTNHNGLPIAIMARPTSTQSIVVGITRIERSEIR
                     DYPVIVALPLPGFADAQPAGRSSWGHEPQFSPSFVREGPMRGVNAIVLVATLAIAAFG
                     ESAGPAYAQAPTVTAFEGARLIPGNGRPSIENGALLVEGTKITQAGAAIDVRVPDGAT
                     RVNLAGKTVMPMLIDTHTHLSQTREGLAQDLKRRAYYGVSAALSMGTDETEIELQMRG
                     ETAPGMARVFTAWRGITRPEPGRTKAPFWIDTEADGRKAVQELAAHKVDIVKIWIDDR
                     EGKYPKLTPALYGAVIDEAHKNGLRVTAHIFTLEDAKGALRAGVDAFAHSVRDRDVDD
                     EFMTMVKQHPNLVVNPNLPDRGVKTDVAWLKASLPAAEMQKVEDANTDRPKAQEFYGI
                     QARNLAKLSAAGTRIILGTDGNTPWAPHVEMADMVAAGMTPMQVIVASTRNAAEFLRI
                     TDSGALEAGKSADFIVLDANPLDDITNTRRISAVYLRGAAVDRTKAP"
     gene            complement(10039..10605)
                     /locus_tag="VLJ17_10940"
     CDS             complement(10039..10605)
                     /locus_tag="VLJ17_10940"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HSV23532.1"
                     /translation="MARTRRRWIREQGMLDPARLVFIDETAVSTNLVRLRGRAPRGTR
                     VIGTVPLGAWQTLTFVGALRHNKMTAPMVIEGAMTGEMFLAYVEQCLVPTLRRNDIVV
                     MDNCRVHLVAGIREAIEKARATLRYLPKYSPDLNPIELPYSKFKALLRKVAARTIPGL
                     YRAIRSFMPQLSARECANYFRHAGYASI"
     gene            complement(10559..10981)
                     /locus_tag="VLJ17_10945"
     CDS             complement(10559..10981)
                     /locus_tag="VLJ17_10945"
                     /inference="COORDINATES: protein motif:HMM:NF013842.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSV23533.1"
                     /translation="MPKSYSGDLRERVIEAVEVEGTSRREAAERFDISASSAVKWLQR
                     WSESRSAAPKPRGGSVSPLEAHAEKILALVAERPDLTLKETLVELLKRRIRTSKSALS
                     RFFARHDVTFKKKPASRGTTASGRGPHAPTLDTRTRHA"
     gene            11601..11882
                     /locus_tag="VLJ17_10950"
     CDS             11601..11882
                     /locus_tag="VLJ17_10950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013948280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23534.1"
                     /translation="MRTILLASLVAIGIGLAGTSGTSAVPANGAVIGNAATATDHVTQ
                     VQWGHWRWGSHGGHWRWGSRGGHWRWGSSGGHWRWGSRGGHWRWGSRGW"
     gene            complement(12043..13089)
                     /locus_tag="VLJ17_10955"
     CDS             complement(12043..13089)
                     /locus_tag="VLJ17_10955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23535.1"
                     /translation="MLAATIEMAAAQSTERPILHTNEAYVEEVTRAATLAVNDPMAVF
                     AFVLNSLPDQVKVYPTENYYYFTFTQGGAPYAGNIRIELGDGDKVTVHFVYYQDLSEW
                     HQEAPLTHIVLDASQGVGIEKIDRLVYRLSYSGKSVVFALNDLSRVKPPTGALGRDEN
                     FIGPIFDESAIRFFLVYNSKLKVFHYILDETVRVADEFFPTRRSDRILVGKRTGFAFY
                     RDRFLDRKILVGVYEGNYRLNTYFDGPFDQLPDNFVEGEMLRQAILDVSPGLKGKIDR
                     FGSSPDGAVRYLIKPYASYQTESQLYGVDTCARRRIRAPTYYQCFVAEPAESDLDAPR
                     AGVKRKAKQLTLRP"
BASE COUNT         2579 a         3975 c         4129 g         2601 t
ORIGIN      
        1 ctatgcatca cttaaatctg ttgcagctgc gcatcactta ttgtaaccta ttgaatatta
       61 gcgatctttt cgctttgcgc ggaccgcttt tatgacgctc cgatgacgca ggaaatgctt
      121 gccgcccgga gcggatgcgg gcatggaaag gaacggcgac gcctatagag gcgcgcccga
      181 ctccgagggt ttggggatgc tctctgtcaa cgtaccccgc ggcaccaccc tcgcacgcat
      241 caatttcgac gccgatggac aggtgccgga cggcgccgtg tggctcgatc tctacggtcc
      301 gaccctcgcc gagaacaagc tggttgaacg cgcgctcggc atagcggtgc cgacgcgcga
      361 ggagatgcag gagatcgagg tcaccagccg gctctacgtg gaaggcggcg cgcgttacat
      421 gacggcgacg ctgatgtgcc actccgacac tgacataccg cgcaccactc cagtcacctt
      481 catcctgtcg ggtcatcgcc tcgtcacggt gcgctacgac gagccaaagc cctttacgat
      541 cgtcggcgcc aagctggcgc gcgtgtgtcc ggcgaacgtg accggcgaga ccgtgcttat
      601 ggatctgctc gacgccgtga tcgaccgcgt cgccgacatt ctcgagagga tcggcagcga
      661 cgtcgatggc atctcccacg aaatcttgga gtccgaaggc ggcatgagcc gcggctacag
      721 cttcaaggaa atcctcaagt cgatcggccg ccgcggcgac catacctcca aggcacgcga
      781 gagcttggtc tcgatcggac ggctgctgct ttatctcgca gccgaagccg atattatgaa
      841 atgggcgaag gatcagcgcg ccaccatcaa gggcatgcag cgcgacgtgc agtcgctatc
      901 cgaccacgcc acctatctgt cgcagaaaat cagctttctg ctcgacgcca tgctcggcgt
      961 ggtcagcttg gagcagaaca acatcatcaa aatcttttcg gtcgccgctg tggtgttcat
     1021 gccgccaacc cttatcgcct cgatctacgg catgaacttc aagcacatgc ccgagctgga
     1081 attcgactac ggctatccgc tcgccatcgc actgatgctg ctcgcggcgg tgctgccgta
     1141 ttttttcttc aggtggatga agtggcttta ggggagggcg ctttcgccca cgactgccaa
     1201 ccatctcaac aatatgtcag ttaacaaaca cgtatgcgta gcaggttgtt gacaatctcc
     1261 gtcgtcgtgg cgctggccgg ttgcgccgcc agcggcgtca aatctacaga cgcgaatgtg
     1321 gtggagtcca ggttggcacc aggtaagggg cggttctatt tctatcgcgg cggatcaatc
     1381 gccggcgtcg ctgttcagct tgaaatcaaa ctcaacaatg aaccggttgg gcgggccgtc
     1441 ccaggaggat tcttcttcgc cgatcgcccg agaggcagct acgaggcgtc gacagcaacc
     1501 gaaattaagg cttgccttcg cattgacccc ggcgaaacga aatacgtccg ggtctcgatt
     1561 tctcccggca tcctcgtccg acacatacag tttgagctgg ttgatagagc gatagccgaa
     1621 gtggaccttg cgtcgctgaa caaagtatag cgtcgcgatg gcggttcagt tgacccagca
     1681 ggcgcagcga tcaagcggtg gcggccgacc aattcgcccg ccgcttgctg atgcgatgct
     1741 gcgcccgcgg cgggaggccg cctgatcgtc cggcactttc ccctcacaca tactgcccgc
     1801 cattgatatg cacctccgcc ccgttcacgt atgacgacat ctccgtgcac agcacataga
     1861 tgatcttcgc cacttcgtcc gtggtgccga ggcggcgcag cggaatctgc gccacgatct
     1921 tgtcggtgcc gggcgatagg atcgcggtgt cgatctcgcc cggcgcgatg gcgttgacgc
     1981 gaatgccgcg ggggccgaag tcggaggcca tttcgcgggt cagcgaggcg agcgccgcct
     2041 tggaggtggc ataggcggag ccggcgaacg ggtggacatg ggagcccgcg atcgaggtga
     2101 cgttgacgac cgagcccttg gcggcctcaa gctccgccac caggccgcgg gccagcatga
     2161 tcggggcaaa gaagttcacc tggaacacct gctgccacac cgcataggtg gtatccatcg
     2221 tacccatgcg gctgccgcca ttgctcttgg gagaaatgcc ggcattgttg acgagcgcgt
     2281 gcaactcgcc gccgaggcga cgcttgactt cttcgatggc gccaagcgtg ctttccggat
     2341 cagcgaggtc aacctggatg tggtcctctg gccccatcgc ccacggacag ttttccggga
     2401 aggcgtggcg cgagcaggtg atgacgcgcc agccagcggc ggcgaagcgc ttcaccgtgg
     2461 catggccgat gccgcggctc gctccggtga gaagcaacgc gcggcgcggc tggttcgagg
     2521 cgggggcgtt ctgcatggcg tgtttgggct gactcttctg cgacactggg cgcattatat
     2581 aggggttgtg cgcggccgtc gtaatggcgt tgccttcttt tacctccccg tcttcgggaa
     2641 ggatggcgcg aagcgccggg tgggatgacc cgggcaaagc tttgccgtgg acaagacccc
     2701 gccttccccg aagacccgga ggggaaagca cacctcacgg atagagccgc gttttcgccc
     2761 aggccgcccc ggcatccgcc cggcagaact cgatgcggtc gtgcagccgg tagggccgat
     2821 cgtgccagaa ttccatcacc gtgggggtca ctcgatagcc gatccaaaat ggcgggcgcg
     2881 gcaccggccc gagggcgaat ttggcggcat tgagtgcaat cgctttttcg aaggcatggc
     2941 ggctttcaag cgggctcgat tgcttgctgg cccaggcgcc gatctgggag gagcgcgggc
     3001 gggtcgcaaa ataggcgtcg gcttcggccg cgctcacggt tgtgacggtg ccgcgcaggc
     3061 ggacttggcg gcgcagcgac ttccaatgaa acgcgaggct ggccttgggg tttgcggcga
     3121 gctcacaacc cttccggctg tcctcgttgg agtagaacac gaagccgcgt tcgtcgaagc
     3181 ccttgagcag caccatgcgc acattgggca ggccgtcggc gtcgacggtg gcgagcgcca
     3241 ttgcgtccgg atcgttaggc tcagccttct tggcgtcctc aaaccaggcg gcgaacagcc
     3301 gtagcggctc atcggcctcg gtaaaatcac cactccttaa ccaagccggg tgttcaatcg
     3361 ggacggtatc ggacattatc ggaggctttc tggtgaccgg ctatgtaccg ggtcctgcat
     3421 atcgcgttgt gtatcgtgga cttggttata gtttatgtgc gggaatgcgc ctatggcagg
     3481 cgcttcgcca ggttgcgcgg cgacgacatg cgagcttgcg ccgtaacagg ccgaacttct
     3541 cccctccgcc ttatggggaa gggtcgggaa gcaagccgtt tggcacttgc gcgccgcagc
     3601 ctgtcggccc ccgcccccaa ccctccctca caagggggga gggagtcgtt ccgccacagt
     3661 acctgtgctc cacggtagtc gccattacgg gtattgcgct gcttgccggg gggtgcgcca
     3721 tgccgacccg attcgaactg ttcggccgcg acgagcggac cgactctgcg attcccttac
     3781 agaacaccgg tgcattttcc agtaccgatc tcgcagtcgc cagtgctgcc acgatggcgc
     3841 tcctggaaca cgacggcgcg agcgggccgt gggagaatcc ccacacgggc gcccgcggca
     3901 cgatcacgcc gctggccacc gcctatcggg ataacggcat cgagtgtcgc gattttctcg
     3961 ccagctatgt tcgcgaaaag gcggaagcct ggatgcaggg cgaggcgtgc cgcaatggct
     4021 ccgggcgctg ggaggtgcgc acctttaaac cgtggcggcg gtaggcgcgt cgttagtatt
     4081 catgagcaga gccacgcccg ggaatgaagc gcatttccgt tgcgaaaatg acactttgcc
     4141 cccacattgt gaccgaacag ccggtgccgg gtaccggcgc cgaagcggag aaattcacga
     4201 tgcgagaccc ctatgaagtg ttgggggtaa aaaagaatgc ggatgcagcg gcgatcaaga
     4261 gcgcgtttcg caagctcgcc aaaaagctgc accccgacgc caacaaggcc gaccccaagg
     4321 ccgcccagcg ctttgccgag atcaactcgg cctacgagat ccttggcgaa gaagataagc
     4381 gcaaagcgtt tgaccgcggc gagatcgatg ccgagggcaa accgaagttt agcggctttg
     4441 aaggcttcgg tccgaggggc ggcttcggcc gcggcggtca ggacgtcaat ttcgagcatt
     4501 tctcgtttgg tccggaaggg gtgcggcgct caggcgggca gggcggtttc tccaatttcg
     4561 acgacttgct cagcggcatg tttgggggct ttgccaacgc gccgcgtggc cgcggacgag
     4621 gacgcggtgg ctttgcccca caggatgcgg aatcggccgg ccgcgacgtc acggccgagg
     4681 tgacgatctc gcttgccgaa gccgccaagg gtgggacccg ccgcgtacac ctgccgaccg
     4741 gcaaggaggt cgacgtcaag attccggctg ggctcggcgc gggcaggcag atccgcctca
     4801 aggggcaggg cttgcccggt ccgggcggta tcggggacgc tctgatcacc gtcacggtgg
     4861 cgccgcaccc ctactttgtg cgcgacggcg acaacctgcg tgtcgacgtg ccgatcacgc
     4921 tttatgaagc cgtgctcggt ggcaaggtgc gggtgccgac gttggacggt gccgttgaac
     4981 tcaacgttcc ggccggcacc agcagtgggc ggatcttccg gatcggtggc aaaggcatgc
     5041 cggccgaagg caaggctggc gatttgtacg ccacagtgcg catcgcgctc ccggagacgg
     5101 gcgacgggga gcttgaggag ttgatgcgca aatggcggca tcacagtcct tacaatccgc
     5161 gcaaggattt gaaatagggg aacggcgggc atcggttacc ctctccgctt acgctggaag
     5221 ggcagtgttt gttgtcaccg tgccttgtgg cccccgaagc cctatgccat aggaggcggc
     5281 cggcggctac cggcgtgacg aggaccctta tgccggaaac cgcggggctg atggcaggca
     5341 agcgcggcct gatcctgggc gttgccaaca atcgatcgct cgcatggggc atcgcgaaat
     5401 cggcgcgggc acacggggcg gagctcgcct tcacgtatca gggcgatgcc ctcaagaagc
     5461 gtgtcgagcc cctggccgtc gaggtcggtg gcatcgtggt cggccattgc gatgtgacga
     5521 acccggcgtc gatcgacgct gtgttcgcca ccacggcggc caagtggggc gcgatcgatt
     5581 tcgtcgttca tgccatcgcg ttttccgacc gcactcagct cgacggccgt tatatcgaga
     5641 ccacccagga caatttcgtc aacaccatgg tagtcagctg ctactcgttc acggcaattg
     5701 cgcaacgcgc cgagaagctg atgcccgatg gcggcgccat gctcacgctc acctattatg
     5761 gtgccgagaa atggatgccc cactataacg tgatgggtat cgccaaggcc gggctggagg
     5821 cctcggtgcg ctatctggcg gccgatctcg gctccaagaa aatccgggtc aacgccatct
     5881 cggcggggcc gatcaagacg ttggccgcct ccggcatcgg ggatttccgc tacatcctct
     5941 cttggaacga gcacaacacg ccgctgcgcc ggaacatcac ggcggacgag gtaggggaca
     6001 ccgccgttta cctgctgtcc gatctgtcgc gtggcgtcac cggcgagatc catcatgtgg
     6061 atgcgggcta ccacatcgtc ggcatgaagc atcccgacgc acccgatatc gcggttcgcg
     6121 gcgattgagc cggcgccgca gccttcggcg gtgagttccc ccctgctcta tttcgtccgc
     6181 cacggagaga ccgactggaa cgccgagcgg cggctgcagg gccagctcga tattccgctc
     6241 aatgatgtgg gccgccgaca atcgatgcaa tgcggtagcg tgctgcgcga tcttctcgcc
     6301 gcccgccaca agacccccgc cgacttcacc ttcatcgcaa gcccattgtc gcgcgcccgc
     6361 gagaccatgg aaattctgcg ccgcgccctc gggctgccgt ccgaaggtta tgccgtcgac
     6421 ccgcgcctcg tcgagctgtc attcggccgt tgggaggggc tgacctatcg ggaggtgcgc
     6481 tcacgcgatc gcgcagcact tgcggcacgc gagcgcgaca agtggaactt tgccacgccg
     6541 gagggcgaga gctatgcgca gctcctcatg cgggtgcgcg actggcacgc cgggctgacg
     6601 cgcgatgccg tcgtgtcggc ccatggcggg gtcgcccgcg cgctcatggt gctgttcggc
     6661 gtgcggacgc cggaggatgc cccgcacggc gaggtcgtcc agggcgcggt ctacgaattc
     6721 ggccccggga tcatgaatcg gcacgggtga tcggcagagg cgcccacaga ccaaatccgc
     6781 gctgtcagaa aaaaatcaac gcacaaagat tacggttgaa ggagtggcgg cgccgcacaa
     6841 caagcgcaat ggcatcatag ggccgtcacg agtttgcttg gtctcacagc cggcccaggg
     6901 ttcagatcga attcgaagac gcttcgccag ccagtggatt tcgattttgc cgagcgatag
     6961 gatcaatgca ggctgttaca tgatggactg tctgttgcgg gaggaccggg atgctgcgat
     7021 taggtcgcgt aggattcatg ctcattccta ccgtcatcgc cgcttggtgc gcggtagcgc
     7081 gtgcgcagca ggcctcgctc cccaaaccga cagaacttcc taacccatac cgattggtgg
     7141 aaggctggcc gacgctgccc aaaactatga atggaggccg ttggggagag gtcattcggg
     7201 tgcatgttgc ccgcaatggc aacatctggg tttttcatcg ctgcttcaat atcgagcctc
     7261 ccggcagcgc cacctgcatt aaccggggcg aggccaatcc tccgatcctg gaattcaacc
     7321 cctcaggtgt tctgctcaga agctttgggg tgggactatt tgcgtatcct catggcttca
     7381 ccgtcgataa cgacggaaac ctttgggcaa gcgatgtcaa cgacagcgag acggtgctcg
     7441 gcatgtcagc caagaacgcc gccggcatcg ctatgggcca ggaggtcctc aagctgagcg
     7501 cggacggcaa ggttttgatg gtgctgggca agccgggagt tgccggcaac ggcccggata
     7561 cgttcgaccg gccgaccggc gtcgccgtcg caccgaatgg cgatatcttt gtgtcggacg
     7621 gccatcaccc caacaagttc ggcaccggcc gcattgtgaa attcaccaag gacggccagt
     7681 tcaccaagac atggggtcgc aaaggtgccg cacctggtga attcgacgag ccccacgata
     7741 tcttcgtcgg cggttcgcag aaccgtatct atgtcgctga ccgccgtaac ctccgcattc
     7801 aggtgttcga tcaggatggc aatttcgttg tcgcgtggca tcaattcggc cagccgagct
     7861 cagtgttcgt cggccaggat gataccattt acgtaggcgc ctcattccct gacccgagcg
     7921 ccaaaaaggg cgagctgagg ggcatcgtga tcggcgatgc caaggacgga tcgctcaagg
     7981 cctttattcc ggacccctcc gacctcgaca aggtggtgcg gggcacgtcg gcgtcgggca
     8041 tcgcagcgga tgacatgggc aacatcttcg cggcggatgt cggcacgcag aatttgagga
     8101 aatacgtcaa agtcaaatag gaccggcctt tggccggccc gatgacaggc tgcccgtgcc
     8161 cacgtgtctg cggtgggcac ggcgcgcaac agcgcgcctt ttgcccactc cgcatagttc
     8221 cggtcgatcg aaattcgctt caaggcgcct ttgtgcggtc tacggccgct ccgcgcagat
     8281 acaccgccga gatgcgccgc gtgttggtga tgtcgtccag cgggttggcg tcaagcacaa
     8341 tgaagtcggc gctcttgccg gcttccagcg caccgctgtc ggtgatgcgc aggaactcgg
     8401 ccgcattccg ggtcgatgcc acgataacct gcatcggcgt catgccggca gcgaccatgt
     8461 ccgccatctc cacatgcggc gcccacggcg tgttgccgtc ggtgccgaga atgatgcgcg
     8521 tgcccgcggc gctcagcttg gcaagattac gtgcctgtat gccgtaaaac tcctgcgcct
     8581 tcggtcgatc agtgttggcg tcctcgacct tctgcatttc ggcagccgga aggcttgcct
     8641 tcagccaagc gacatcggtc ttaaccccac ggtcgggcag gttcgggttg accacgagat
     8701 tcgggtgctg tttgaccatg gtcataaatt cgtcgtcgac gtcgcggtcg cgaacgctgt
     8761 gggcgaacgc atcgacgccg gcgcgcagtg cgcctttcgc atcctcgagc gtgaagatgt
     8821 gcgcggtgac gcgtagcccg ttcttatgcg cctcgtcgat gacggcgccg tacagcgccg
     8881 gcgtgagctt gggatacttg ccttcccggt cgtcaatcca aatcttgacg atatcgacct
     8941 tgtgggccgc gagctcctgc accgccttgc ggccgtccgc ctcggtatcg atccagaacg
     9001 gtgccttggt gcgtccgggc tcagggcgcg tgatcccgcg ccatgcggtg aacacccgcg
     9061 ccatgccggg cgcggtctcc ccgcgcatct gcaactcgat ttcggtctcg tccgtgccca
     9121 tgctcagggc ggcactgacg ccataatagg cgcggcgctt caaatcctgc gcgagccctt
     9181 cgcgggtctg gctgagatga gtgtgggtgt cgataagcat cggcatgacc gtcttgccgg
     9241 cgaggttcac gcgtgtggcc ccgtccggca cgcgcacatc gatggcggcc cccgcttggg
     9301 tgatcttggt gccttcgacg agcaaggcgc cattttcgat cgaggggcgc ccgttgcccg
     9361 ggatgagccg cgcgccctcg aacgccgtga ctgttggcgc ctgggcgtac gccggaccgg
     9421 cggattcacc aaaggccgca atggcaagcg ttgcgaccaa gacgattgca tttactccac
     9481 gcatcggacc ctccctgacg aaactaggcg aaaattgcgg ctcatgaccc caggagctgc
     9541 ggcccgcagg ttgcgcgtca gcgaaacccg ggagcggcag cgccacaatc acagggtaat
     9601 cccggatttc gctgcgctca atccgggtta tgcccaccac aatcgattgc gtgctcgtag
     9661 gtcttgccat gatcgcaatg ggcaagccgt tgtggtttgt cctttcaaac gtttgccacc
     9721 ccagtcgcgc gtacaacgac tcgctgcgcg gcgtaaacag atagagcctc tcgaagccga
     9781 tacgatgagc ctcatcgatc gccctcagcg aaagcgccga ggcgatgcct ttacgtcgca
     9841 gctcgttggg cacgaatact gaggacagcc aaggcgtcag atgctgatgc gtgagggtcg
     9901 tcttcaaaat gctcgccgag ccgagaagct cgccgtgctc ggaaacagcg accagggcta
     9961 ttggaaggcg gtcgcgttga agagactcac ggagcctgtt ccttcgttgc tcaatcgtga
    10021 cgctaaagcg gttcccggtc atattgaagc atagcctgca tgcctgaaat agttggcgca
    10081 ttcccgagca ctgagctgtg gcatgaacga gcgaattgct cggtagagcc cgggaattgt
    10141 tcgagcggca accttgcgca gcaaagcttt gaatttgctg taaggcaact cgattggatt
    10201 gagatcgggc gagtatttcg gcaagtagcg aagtgtcgcc cgtgctttct cgatcgcctc
    10261 tcgaatgccg gccaccaagt ggacgcggca gttgtccatc acgacgatgt cgttgcgccg
    10321 gagtgtagga accaagcact gctcgacata ggcgaggaac atttcgccgg tcatggctcc
    10381 ctcaatcacc attggcgcag tcatcttgtt gtggcgcaag gcgcccacga aggtgagtgt
    10441 ctgccatgct ccgaggggaa cggtgccgat caccctggtg cctcgtggag cccgccccct
    10501 aagtcgcacc agattggtgc tcaccgcggt ctcgtcgata aataccagcc gggcgggatc
    10561 aagcatgcct tgttctcgta tccagcgtcg gcgcgtgcgg gccacgtccg ctcgctgtcg
    10621 ttccgcggct tgcaggcttt tttttaaagg tgacgtcgtg gcgagcaaaa aaacgcgaaa
    10681 gcgcgctctt gctggttcga atccggcgct tgagcagttc cacaagcgtc tccttcaaag
    10741 tcaggtccgg tcgttcggca accaaagcca atatcttctc cgcgtgcgct tccaacggag
    10801 acacacttcc tccgcgcggc ttcggcgcgg cactccggct ctcgctccaa cgctgcagcc
    10861 atttgaccgc cgaacttgca ctaatatcga aacgctcggc cgcctcgcgt cgcgatgtgc
    10921 cctcgacttc caccgcttcg attacccgct cccgcaagtc accagaatag gattttggca
    10981 tcgctcaacc ccgaaaggag aatcaatgtc caaagactcg ctcatctcca atcggttggg
    11041 aatcccgtcg attcaaatcc ggcgggaacc gctttagtaa ccgacgcgcg gggatattgg
    11101 attgcccggt cacgccgggc aacaccgatc gaatcgatcc aaaatggaaa acgcccgccc
    11161 atcttcgctg cgcgaaagat ggaaccaaat agtcggttcg aaagtttata ttcttagcaa
    11221 gctggaaaga gggcgagata ataagaaatg cgccgtgcgt atcgggtcgc gtgtttctac
    11281 gcgcgtattt ctacgcgcgt gtttctacgc gattgcctaa tacctgaacg gtagataaat
    11341 gaacagtaga taaatgaaca acagataaat gaacaatagt taaacgatca cgacttttaa
    11401 aaagctaaat tggaagtgat tattgtatta attgactttg aaaagaccaa attggaagtg
    11461 attattgtgt taatgatgtc gtctgccgac aatccacttt cgaggctagg cggcatccgc
    11521 aaatccgcac atgggggtga gcgcagactg tgatcgcacc agcggctatg gtcgaacaca
    11581 gcaattaaag gaacatcacg atgcgaacga tcttgttggc cagtttagtg gcgattggca
    11641 ttggactcgc cgggacatca ggtacatccg ccgtgccagc caatggtgcc gtcatcggca
    11701 acgccgcgac agcaaccgac cacgtcacgc aggtccagtg gggccattgg cggtggggca
    11761 gtcatggcgg ccattggcgg tggggcagcc gcgggggcca ttggcgctgg ggcagctccg
    11821 gcggccattg gcgctggggc agccgcgggg gccactggcg gtggggcagc cgcgggtggt
    11881 gatgagccca tgagctgacg gtaatatgag gaggacggac cgttctgcgc aaagcggagc
    11941 ggtccgtcac ctttgcgtcg catgcgggag gacgtcgaaa tttggcgatt tcagcggccg
    12001 aactgccaat ttagtgggta atccaattca cgctcattgg tctcacggac gtagcgtgag
    12061 ctgctttgct ttcctcttta cgccggcacg cggcgcatcg agatcggatt cagcgggctc
    12121 cgccacgaag cattggtaat aggttggggc tcggatcctg cgtctcgcgc atgtatcgac
    12181 gccgtagagc tggctttcag tctgatagga tgcgtagggt ttgatcaagt agcggacggc
    12241 accgtccggt gagcttccaa aacgatcgat cttacctttg aggcctggag aaacgtctag
    12301 aatggcttgc cgcagcatct caccttcaac gaagttgtcc ggtaactggt cgaacggccc
    12361 atcgaaatac gtgttgagcc gatagttgcc ctcatagaca ccaacgagga tcttgcggtc
    12421 aagaaagcga tctcggtaga aggcaaaacc ggtgcgcttg ccgacgagaa tgcgatcgct
    12481 gcgccgggtg gggaagaatt cgtccgcaac cctcacggtc tcgtcgagga tatagtggaa
    12541 gaccttcagc ttcgaattgt agaccagaaa gaaccgaatg gccgattcgt cgaagatcgg
    12601 accgataaaa ttctcgtcgc gccccaacgc gcctgtgggt ggcttcaccc gcgatagatc
    12661 gttgagcgca aatacaacgc tctttccact ataggaaagc cggtaaacca gccgatcgat
    12721 cttttcgata ccgaccccct gcgaggcgtc caaaacaata tgcgtcaacg gcgcctcctg
    12781 atgccactcg gataaatcct gatagtagac gaaatgtacg gtgaccttgt caccgtcacc
    12841 caactcgatc ctaatatttc cggcgtacgg ggcaccgccc tgtgtgaagg tgaaatagta
    12901 ataattttcg gtcgggtaaa ctttcacttg atccggaagg ctgttcaaaa caaatgcgaa
    12961 taccgccatt gggtcgttga ccgcgagcgt cgcggcgcgc gtgacctcct ccacataggc
    13021 ttcattggtg tggagtattg ggcgttccgt gctttgcgcc gccgccatct cgatcgttgc
    13081 agcgagcatc gtgagaacca taaaacaggg gcagcggcat ttcctcttcg agcaaccgcc
    13141 cgaattgttc agcattttac ccatgagatg acctcgcgag cgtcgcacag ctcagctcag
    13201 taccattatc tcgatcgccc gcacaggcca taatcctcca tcgcctcaag atgcgacaat
    13261 ggaaaagcag gaacgcggcg ggat
//
LOCUS       DATILV010000483         3632 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2671457, whole genome shotgun sequence.
ACCESSION   DATILV010000483 DATILV010000000
VERSION     DATILV010000483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3632)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3632)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3632
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2671457"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..275
                     /locus_tag="VLJ17_10960"
     CDS             <1..275
                     /locus_tag="VLJ17_10960"
                     /inference="COORDINATES: protein motif:HMM:NF017999.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HSV23536.1"
                     /translation="SPPERIEAKIEGMPLGIVGRFTAVSTTDLIEAGNETLVKYAIDA
                     TITGKLGSMGQPVLKSKAKEMERKFAEKMRAAFAGSLPTGASGAAS"
     gene            272..1147
                     /locus_tag="VLJ17_10965"
     CDS             272..1147
                     /locus_tag="VLJ17_10965"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HSV23537.1"
                     /translation="MTPFDLAEPATIEEALRLLDPDDGTVRPLGGGTALMLMMKAGVF
                     RPTRLVSLRKITKLSHVAATPDGGLTIGALTPLSDVERSAEVAQCAGVIVHTMRRLSN
                     VRVRNVATVGGCLAHGDPHMDLPPVLMALDASILVVGRAGERTLKVENLFAGYYETVL
                     KRDEIIAELRVPSQGARRAAYLKCTTGCADDWPALGVAVSLEADGQTIHAPRVVVSAA
                     TEKAIRLKGAEEVLTGATIDDAVLVRAGKAAADEAETVSDVRGSAPYKRELLRVYVRR
                     AVRQAFDCQPSEAAH"
     gene            1147..3450
                     /locus_tag="VLJ17_10970"
     CDS             1147..3450
                     /locus_tag="VLJ17_10970"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HSV23538.1"
                     /translation="MTTATMTTGISGSQIGRNLPRLEGREKVTGRAEYTHNLRLPGML
                     YGKVFRSTVAHGHIRSIDISAAKAVPGVYRVVTSEDVIKVIPHPYYGPAFHDQPILAI
                     GKVHYVGEPVAVVLAEDPHVAETAAALIVAEYEELAAVYDEVEAAQNKILVHEELKPA
                     GTFADLKHLKGVKGTNIALDYRLRKGDVDKAFSEAAHVFEHEFRTQKVLHLAFEPFVS
                     IADYKGDRLILYSASQGPSFVRIEIARLLGWPENRVRIKVPFLGGGYGGKLYIKLEAL
                     VTALSMIAKRPVKVSLPMEEVFYTITRHPMTFRIKSGVDPDGRITARRCEVFWNGGAY
                     ADVGPRVAQKSGFTASGPYDIENVSIDSYALYTNQPPAGALRGFGVPQLVWAYESHTD
                     MMARALKIDPLEFRRRNVTREGARHATGTPLKDAPVEKVLERVAARMNWSEPLDRGTG
                     AIRRGRGLAIALKAVISPTTSVAIVNVNADGSTTLYCGTIDMGQGSDTAMAQMVGEIL
                     NIPAESVNVVPRDTDVTPYDMGTLGSRSLFHMGHAVKLAAEEARDKISALARDLGLPE
                     GTNYSVADLFQKKYGMQAGNIVGTGVYKPNYVPPEPGTGLTPNVTPFWMVSAVGAEVE
                     VDTETGHVRITRLLNVCDIGKPINPKICESQISGASIMQLGFTMFEKMHFDGGQVTNA
                     SLADYKIPGIHDLPMTLENETIDSYQTNGPFGGKGVGEVATFCVSPAIGNAIDDAVGV
                     RLMELPLNPEAVLRALRANENKPLEKA"
     gene            3450..>3632
                     /locus_tag="VLJ17_10975"
     CDS             3450..>3632
                     /locus_tag="VLJ17_10975"
                     /inference="COORDINATES: protein motif:HMM:NF012339.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HSV23539.1"
                     /translation="MTPIRTISFTLNGERVSAQIASHHSLLEVVRNAFSLYGARESCG
                     QGLCGCCTLIVDGRAVS"
BASE COUNT          712 a         1142 c         1124 g          654 t
ORIGIN      
        1 tgtcgccgcc cgaacgcatc gaagccaaaa tcgaaggtat gccgctcggc atcgtcggac
       61 gctttactgc ggtgtccacc accgatctta tcgaggccgg caatgagacg ctggtgaaat
      121 acgcaatcga cgccactatc actgggaagc tcggcagcat ggggcagccg gtgctcaaat
      181 ccaaggccaa ggaaatggaa cggaagttcg ccgaaaagat gcgcgcagcg tttgcggggt
      241 cgctcccgac aggcgcttcg ggagccgcct catgacgccg ttcgatcttg ccgagcctgc
      301 gactatcgag gaggcgttgc gcttgctcga tcccgatgac ggcacagtgc gcccgctcgg
      361 cggcggcact gccctgatgt tgatgatgaa ggcgggcgtg tttcgcccca cccggctcgt
      421 cagcctgcgc aagatcacta agctgtcgca cgtcgcggcc acaccggatg gcgggcttac
      481 gatcggcgcg ttgaccccgc tctctgacgt cgagcgctca gccgaggtgg cacagtgtgc
      541 cggcgtgatc gtccatacca tgcggcggct ttccaacgtg cgggtgcgca atgtggcgac
      601 tgtcgggggt tgccttgccc atggcgatcc gcacatggat ttgccaccgg tattgatggc
      661 gctcgatgcc agcattttgg tggtgggccg tgccggcgag cggaccctga aggtcgaaaa
      721 tctgtttgcc ggctattacg aaaccgtgct caagcgcgat gagatcattg ctgagctgcg
      781 cgttccgtcc caaggtgcac gacgcgccgc ctatctcaaa tgcacaaccg gctgcgccga
      841 tgactggccg gcgctcggcg ttgccgtttc gctggaagcg gacgggcaaa cgattcatgc
      901 accgcgcgtg gtcgtcagtg cggcaaccga gaaggcgatc cgccttaagg gtgccgagga
      961 ggttctgacc ggtgccacga tcgacgacgc cgtgctagtg cgcgcaggca aggccgccgc
     1021 cgacgaggcc gaaaccgtgt ctgacgtgcg tggctccgcg ccctataagc gcgaactgtt
     1081 gcgcgtctac gtgcgccgcg cagtgcgtca ggccttcgac tgtcagccaa gcgaagcggc
     1141 acactgatga caaccgcaac catgacgaca ggaatttccg gcagccagat cggccgcaac
     1201 ttgcctcgac tcgagggccg cgaaaaggtc accggccggg ccgaatacac ccacaacctg
     1261 cgcctgcccg gcatgttgta cggcaaggtg ttccgctcga cggtcgccca tggccacatc
     1321 aggtcgatcg acatcagtgc agccaaggcg gtgcctggcg tctatcgggt cgtcacctcc
     1381 gaggacgtga tcaaggttat tccgcatccc tattacggcc cggccttcca cgaccagccg
     1441 atcctcgcca tcggcaaggt gcactacgtc ggcgaaccgg tcgccgtggt gctggcggag
     1501 gacccgcacg tcgccgagac cgcagccgcg ctcatcgtgg ccgaatacga agagctggcg
     1561 gcggtgtatg atgaagtcga agctgcacag aacaaaattc tggtgcacga ggaactcaag
     1621 ccggccggta catttgccga tttaaaacac ctcaagggcg tcaagggcac caatatcgcg
     1681 ctcgactacc ggctgcgcaa aggcgacgtc gacaaagcct tcagcgaggc tgcgcacgtc
     1741 tttgagcatg agttccgcac ccaaaaggtg ctgcacctcg cgttcgagcc gttcgtctcg
     1801 atcgcggact ataagggcga tcggctgata ctctactcgg cctcgcaggg gccgtcgttc
     1861 gtgcgtatcg aaattgcccg cttactcggc tggcccgaga atcgcgtgcg catcaaggtt
     1921 ccgttcctcg gcggcggtta tggcggcaag ctctacatca agctcgaggc gctggtgacg
     1981 gcgctgtcga tgattgccaa gcgtcccgtc aaggtttcgc tgccgatgga ggaggtgttc
     2041 tacactatca cacggcaccc gatgaccttc cgcatcaaga gcggcgtcga cccggatggc
     2101 cgcatcacag cgcgacggtg cgaagtgttc tggaacggcg gcgcttatgc ggatgtcggg
     2161 ccgcgagtgg cgcagaaatc gggcttcacg gcgtcgggac cctacgacat cgagaacgtg
     2221 tcgatcgatt cctatgcgct ctacacaaac cagccgccgg cgggcgcgtt gcgcggattc
     2281 ggggtaccgc agctcgtctg ggcctatgag tcccacaccg acatgatggc gcgcgccctc
     2341 aagatcgatc cgctcgaatt ccgtcgccgc aacgtcacac gtgaaggcgc caggcatgcc
     2401 accggcacac cgctcaagga tgcaccggtc gagaaggtgc tggagcgggt cgctgcgcga
     2461 atgaactggt cggagccgct cgaccgcggc accggcgcga tccggcgcgg ccgtgggctt
     2521 gccatcgccc ttaaggccgt aatttcgccg accacctccg tcgcgatcgt gaacgtcaac
     2581 gccgacggca gcacaacgct ttactgcggc accatcgaca tgggccaagg ctccgacacc
     2641 gccatggcgc agatggtggg cgaaatcctc aacattccag ccgaatccgt gaatgtggtg
     2701 ccgcgcgata ccgacgtcac gccctatgac atgggcacgc tcggatcacg ctcgctgttc
     2761 cacatgggcc atgccgtgaa gcttgcggcc gaggaagcac gcgacaagat ttcggcgctt
     2821 gcccgcgatc tgggtttgcc ggagggcacc aactattcgg tcgctgacct gttccaaaaa
     2881 aaatacggca tgcaggccgg caatatcgtg ggtaccggcg tatacaagcc aaactacgtc
     2941 ccgcctgagc ccggcaccgg gctgacgccg aacgtgaccc cgttctggat ggtgtctgca
     3001 gtcggcgccg aggtcgaggt cgacacagag accggccatg tgcgtattac gcggctgctc
     3061 aatgtctgcg atatcggcaa gcccatcaat ccgaagattt gcgaatcgca gatttccgga
     3121 gccagcatta tgcaactcgg cttcacgatg ttcgagaaga tgcacttcga tggcggtcag
     3181 gtaaccaacg catctctggc agactacaaa attcccggaa tccacgacct gcccatgacc
     3241 ttggagaacg aaaccatcga ttcctatcag accaacgggc cgttcggcgg caagggcgtc
     3301 ggcgaggtcg cgaccttctg tgtatcgcca gctatcggca acgccatcga cgacgccgtc
     3361 ggagtgaggc tgatggaatt gccgctcaac ccggaagccg tgttgcgcgc gttgcgagcg
     3421 aacgagaaca agccgttaga gaaggcctga tgacccccat ccgaaccatc tctttcaccc
     3481 tcaatggcga gcgagtttcg gcgcagattg cctctcatca cagcctgctc gaagtcgtcc
     3541 gcaacgcctt cagcctctat ggggcacgcg agagctgcgg ccaggggcta tgcggctgtt
     3601 gcaccctaat cgtcgatggc cgtgctgtgt cc
//
LOCUS       DATILV010000484        10549 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2415784, whole genome shotgun sequence.
ACCESSION   DATILV010000484 DATILV010000000
VERSION     DATILV010000484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10549
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2415784"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1075
                     /locus_tag="VLJ17_10980"
     CDS             <1..1075
                     /locus_tag="VLJ17_10980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV23540.1"
                     /translation="LEEPESAEHNALVRVLRLPGGIRILVGRDLEERERMFRIIALAG
                     RWSVAIVIVLGILGGVFVSRRVLKRVDAMTGTAQTIMAGDLSGRLSVIGSGDEFDRLA
                     LNLNGMLERIESLMRGLKEVTDNVAHDLKTPLTRLRNRCEAALRTAKTEAEFRRVLVE
                     SIEESDGLIRTFDALLMIARAESGEVRDGMAEFDAAEVARDVGELYEPLAEDKGLTLE
                     VEAKERAAVKGNRELVSQALANLVDNAIKYAAPEAKDPQGAINGQRNGIVVEANADQD
                     QVVLTVSDRGPGIPHGDRARVIDRFVRLEQSRSLPGSGLGLSLVSAVARLHGGELKLE
                     DNAPGLRARISLPRSTVPPQQAA"
     gene            1072..4023
                     /locus_tag="VLJ17_10985"
     CDS             1072..4023
                     /locus_tag="VLJ17_10985"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008882 - [glutamate-ammonia-ligase]
                     adenylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamine synthetase]
                     adenylyltransferase/[glutamine
                     synthetase]-adenylyl-L-tyrosine phosphorylase"
                     /protein_id="HSV23541.1"
                     /translation="MTIPADRCILVERLAAPHALSDEAGRTRVDGWLTELADCEAGQA
                     MRHITAAHPSVRALMDAIASSSTYLWDLVCADPARLAALLQSDPDERLANICANAADL
                     PRDATDTDAMRFLRIMKAEAALLIALADIGGVWEVMRVTAALTAVADTAITTAMCHVL
                     RQAARAGKLTPREVADPQDGCGLFVLAMGKMGAFELNYSSDIDLVIFFEPQAAALAPG
                     VEAATLFVRLTRQLIRLLQERTEHGYVFRVDVRLRPDPASTQIAISVPAALDYYESSG
                     QNWERAALIKARVCAGDRSAGAAFLANLAPFIWRKYLDFVTLADIHEMKRQIHAYRGH
                     SVVAVEGHNIKVGRGGIREIEFFVQTQQLIAGGRNPQLRSQETLVTLRALADGGWVDA
                     ATCADLEDAYRFLRKVEHRLQMVADEQTHTLPPRRDELDRFARFLGYPDRDAFAHVLL
                     PHLRAVESHYARLFERASLEAAERRGLVFPPQADAKETLAKLSEMGFQHPIVVSTAVR
                     SWLAGRPRGLRGEVARARFAELAPLLIDHIARVENPDAALAAFDRVLSNLHGGARLFA
                     LLLQNPDLVALVARMLGAAPRLADTLALHPEVLDPLIDPAFFGALPGSERLATGLSRS
                     LDQADSYEDFLDRVRRFGQEQGFLIGARILSGTVSAQQAGEAFAAVADTIVRALHAKV
                     AEVFRASHGEVHGGDAVVLAMGKLGGREMAANSDLDLIVVYDFDAAHPESDGPRPLHA
                     SHYFARLTQRLVNALTTRTNYGRLYDVDMRLRPSGRSGPVATSIASFAGYQHHEAWTW
                     EHLALTRARVVSGASALVARVEAVIRDVLCRPRDARAVAADVVDMRRAIAAEKGEATR
                     WDLKYAAGGLVDLEFIAQYLQLVHAAAVPGILDTATAAVFEKAVREGILTVEDAEVLR
                     PAMRLYQDLSHILRLCVAAPFDPKSAGSGLTQLLALAADVPDFNTLEAHLADTQARVR
                     NCFVRILGGEP"
     gene            complement(4139..5794)
                     /locus_tag="VLJ17_10990"
     CDS             complement(4139..5794)
                     /locus_tag="VLJ17_10990"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HSV23542.1"
                     /translation="MTLKSYRFALAAYLALVFLAGTASANERGRNAALQNLKHIIVVM
                     QENHSFDNYFGALAYVPGGVYHSANADRDHDGDRDGDDGDAGGCRPDDHRCVDGLSCK
                     VASDGTLSCTNANIDAGTGKVFAFHNTNRCVKPDLDHGWVGTHHEANFDDPNASLRHF
                     RGDGFVRQNDLTEQIDNGTESPTEDETMGFYTQAELPFYYDLAQKFAISDRHFSSVLG
                     PTFPNRSYAMAATSFGHVTTNDEIPPLGGYKPLTGTIFDLLEAHAVTWANYFQDVPSG
                     GSFRLFTLGGHDPHFLPYALFLAQVTGVPGVPALPQVSFVDPNFGFFSRTAENDEHPP
                     ADIQRGEAFLSELANAVRNGPYWKDSIIFITYDEHGGFYDHVKPPQAPQGDTRTPDGI
                     APGQCADASFLPASAQPGGGAQCSTNQVNPAGNSVATAANLCPAFAANPTGPFPEECA
                     SFDQLGFRVPFIAVSPFAKPHHVSHAVSDHASVLALIEKRFMVPFNSRGNDHPHLTRR
                     DQFADTLEDMFDFENSPSLNTTIGTAAPPTNDCGPFSGVNSTP"
     gene            6006..6968
                     /locus_tag="VLJ17_10995"
     CDS             6006..6968
                     /locus_tag="VLJ17_10995"
                     /inference="COORDINATES: protein motif:HMM:NF024874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSV23543.1"
                     /translation="MTKTSLSDHFDGARFFNPTLPKDFAHSRRSTLRMLCEPRSRWPA
                     WVENKGVPRLNESLRADQVAITFVNHATFLVSTGGINILTDPVWSERVSPFRRIGPKR
                     VRKPGVTFEDLPTIDLVLLSHNHYDHLDIATLTQLRQSFSPTVFAAAGDARVVGPIGF
                     EDLRELDWWDMIEFNHMLKVTFVPAQHFSARGLFDRQKSLWGGYMVESWGRRIYFAGD
                     TGYSTHFSDIKSRLGSPDIAMLGIGAYEPRWFMKPIHMNPAEAVCAHRDLGSKQSIGM
                     HFGTFRLTTEAIDQPQADLRRALFESGIPESEFVTLHEGETRIY"
     gene            7613..8095
                     /locus_tag="VLJ17_11000"
     CDS             7613..8095
                     /locus_tag="VLJ17_11000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015821245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23544.1"
                     /translation="MTETLHPAASHNLPSFITPPGETDILMVVMSVVLVLAILMFGIL
                     FFRLHTLPERIAHKTHKVQFEIVAVLGLIALFTHMHIFWIAGLLLALIDVPDFGNSLG
                     RIAGSVEKIAGIEPGEGAAIVGIKQAEEAAEVAPETYGARHGDGVAALPTTARQAKRS
                     "
     gene            8099..9331
                     /locus_tag="VLJ17_11005"
     CDS             8099..9331
                     /locus_tag="VLJ17_11005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HSV23545.1"
                     /translation="MLELLLCSLVTIFPDYLYRRYVQGKRFGKEITFYSVWFELRWGI
                     TGCLILTVALITVIFYNHPSTSSVTMFFKTVPIISETNGRVAEVYIGTNGPVTKGMPL
                     FKLDSSKQEAAVETARRKITEIDAQIVVARADVRKAEGQLKEAESAHQQTVDELETKE
                     ELYRRNPGNVPFREIERLQVQAEGRLAAIASATAAKQATEEQVSTFLPAKKASAEGEL
                     AEAEVELGKTVVRAGVSGRVEQFVVRVGDIVNPFMRPAGVLIPEGIGQRSLQAGFGQI
                     EAQIMKVGMTAEVTCVSKPWTIIPMVVTDVQDVIAAGQFRGGDQLIDAQQVTRQGTLT
                     VSLEPLYKGGLDGITLGSSCIANAYSNNHDLIVSKDTGAIKRAVLHAVDALGLVHALI
                     LRLQALMLPITTLVFSGH"
     gene            complement(10067..>10549)
                     /locus_tag="VLJ17_11010"
     CDS             complement(10067..>10549)
                     /locus_tag="VLJ17_11010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV23546.1"
                     /translation="DFEDFEVDEIVDEAMRVVSGRAAKKRLAMVTDVTPGMKLRADKR
                     AIKQIAINLLSNAVKFTPEGGHVRVRARVHASALAFMFDDTGIGISKDALKKIGRPFE
                     QVESLLTKTHQGSGLGLAIAKSLAELHGGTLRIRSNVNRGTVVLVRLPMATGRDKAQP
                     "
BASE COUNT         1989 a         3144 c         3320 g         2096 t
ORIGIN      
        1 cctggaggag ccggaatccg ccgagcacaa tgcgttggtg cgggtgttgc gtctccccgg
       61 cggcattcgc attctggtcg ggcgcgatct cgaggagcgc gagcggatgt ttcgcatcat
      121 agccttggcg ggacgatggt cggtcgccat cgtcatcgtg ctcggcatcc tcggcggggt
      181 gttcgtgagc cggcgcgtgc tcaagcgggt cgatgccatg accgggaccg cgcagaccat
      241 catggcggga gacctttcgg gccggctgtc ggtcatcggc agcggtgatg agttcgaccg
      301 cttggctctc aatcttaacg gcatgctgga gcgcattgag tcgctcatgc gcggtctgaa
      361 agaggtcacc gacaacgttg cccacgatct taagacgccg ctgacgcgcc tgcgcaaccg
      421 ctgcgaggcg gcgttgcgca ctgccaagac cgaagccgaa tttcgccgcg tgctggtgga
      481 gagcattgag gaatcggacg ggctgatccg cactttcgat gcgttgctga tgatcgcacg
      541 ggcggaatcc ggagaggtcc gcgacggcat ggcggaattc gatgctgccg aggtggcgcg
      601 tgatgtcggc gagctttacg agccgcttgc cgaggacaag gggctcactc ttgaagtgga
      661 ggcaaaagaa cgtgccgccg tgaagggaaa ccgcgagctc gttagccagg cgctagccaa
      721 tctggtcgac aacgccatca aatatgccgc gcctgaggcg aaggacccac agggggcgat
      781 taatggccag cgtaacggga tcgtggttga ggccaacgcc gaccaggatc aggttgtact
      841 tacggtcagc gatcggggcc ccggaattcc ccatggcgac cgcgcccggg tcatcgaccg
      901 cttcgtgcgc cttgagcaga gtcgctcgct gccggggtcc gggctcggct tgagcctggt
      961 ctccgctgtc gctcggcttc acggcggtga actcaagctc gaagacaatg cgcctggcct
     1021 gcgggcacgg atttcgttgc cgcgttccac cgtgccgccg cagcaggccg cgtgaccatt
     1081 ccggccgacc gctgcattct cgtggagcgt cttgcggcgc cccacgccct ctcagatgag
     1141 gccgggcgga cccgtgtgga cgggtggctc acggagcttg ccgactgcga agcggggcaa
     1201 gcaatgcgcc atatcacggc ggcgcatccg tccgtccgcg ccctgatgga cgcaattgcc
     1261 tcgtcctcga cctatctttg ggatctcgtg tgtgccgatc cggcgcggct ggcggcgcta
     1321 ctgcaatccg atcccgacga gcggctggcc aacatctgcg ccaatgcggc ggatctgccg
     1381 agggacgcga cggacaccga cgccatgcgg ttcctccgta tcatgaaggc cgaagcggcg
     1441 cttttgattg ccttggcgga tatcggcgga gtgtgggagg tgatgcgggt caccgcggca
     1501 ttgaccgcgg tggccgacac tgcgattacg actgcgatgt gccatgtgct gcgccaagca
     1561 gcgcgcgccg gcaagctcac cccacgggag gtcgccgatc cgcaggacgg ctgcggactg
     1621 ttcgtgctcg ccatgggcaa gatgggcgcc tttgagctaa actattcgag cgacattgac
     1681 ctcgtcatat ttttcgagcc gcaggcggcg gctttggcgc caggcgttga agcggcgacg
     1741 ctgttcgtgc gcctcactcg ccaactcatc cggctgctgc aggagcgtac ggaacacggc
     1801 tatgtgttcc gggtcgacgt gcgcctacgg ccggatccgg cttcgaccca gatcgcaatt
     1861 tccgttccag ccgcgctcga ttactacgaa agcagcgggc agaactggga gcgcgccgcg
     1921 ttgatcaagg cacgcgtgtg cgccggcgac cgcagtgccg gggcagcatt cctcgccaat
     1981 ctcgcgccct tcatctggcg caaatacctg gatttcgtga cgctcgccga cattcacgag
     2041 atgaagcgcc aaatccacgc ctatcgcggc catagcgtgg tcgcggtcga gggccacaat
     2101 atcaaagtcg gtcgcggcgg catccgggaa attgaattct ttgtccagac ccagcagctc
     2161 atcgccggtg gacgcaatcc gcagttgcgc agccaggaaa cgctggtgac actgcgggcg
     2221 ctcgccgacg gcggctgggt tgacgcggcg acctgcgccg atcttgagga tgcctatcgg
     2281 ttcctgcgca aggtggagca tcggctgcag atggtggccg acgagcagac ccataccttg
     2341 ccgccgcggc gcgacgaact tgatcgcttc gcgcgcttcc ttggctaccc cgaccgcgat
     2401 gcattcgcgc acgttttgct cccgcatttg cgggccgtgg agagccatta cgcgcgtctg
     2461 ttcgaacgcg cttcgctcga agccgccgaa cgccgcggcc tggtgtttcc gccgcaggcg
     2521 gacgccaagg aaacgcttgc aaaactgagc gagatgggct tccagcaccc gattgtcgtc
     2581 tcaacggcgg tgcggagctg gcttgcgggg cgtccacgcg gcctcagggg agaggtcgcg
     2641 cgcgcccgct tcgccgagtt ggcgccgctc ctcatcgatc acatcgcgcg ggtggaaaat
     2701 cctgacgccg cgctcgccgc ctttgaccgc gtcctcagca atctccatgg cggcgcgcgt
     2761 ttgttcgcac tgctcctgca aaatcctgac ctggtggcgc tggtggcgcg tatgctcggc
     2821 gccgcgccgc ggctggccga cacgctggcg ttgcatccag aggtgctcga tccgctgatc
     2881 gatccggcct ttttcggcgc gctgccgggg tcggagaggc tcgccaccgg cctttcgcgt
     2941 tcgctcgatc aggcggactc ctacgaggac tttctcgatc gcgtgcgccg gttcgggcag
     3001 gaacaggggt tcctcatcgg tgcccgcatt ctctccggca cggtatcggc gcagcaggcc
     3061 ggcgaggcct tcgcggcggt tgcggacacc atcgtgcggg cgctccacgc caaggtggcc
     3121 gaggtctttc gggcgagcca cggggaggtg cacggcggcg acgccgtggt gcttgctatg
     3181 ggcaagctgg gcggtcgcga aatggcggcg aactccgatc tcgatctcat cgtggtctat
     3241 gacttcgatg cggcccatcc ggaatccgac ggtccgcgcc cgctccacgc ctcccactat
     3301 tttgcacgcc tgacccagcg cctggtcaac gcgctgacca cccggaccaa ttacggtcgc
     3361 ctctacgatg tcgatatgcg gctgcggcca tccggccgct ccggaccggt tgcgacctcg
     3421 atcgcttcct tcgcaggcta tcagcaccac gaggcctgga cctgggagca cttggcactg
     3481 acgcgcgccc gcgtagtgtc gggcgcgtcg gcgctcgtcg cgcgcgtcga agccgtcatc
     3541 cgtgacgtgc tgtgccgacc gcgcgatgcc cgcgcggtcg ccgccgacgt cgtcgacatg
     3601 cgccgcgcca tcgcggccga gaagggcgag gcaacacgct gggacctcaa atacgccgcc
     3661 ggtggcctcg tcgatcttga attcattgcg caatatcttc agctcgtgca cgcagccgcg
     3721 gtgcccggca tcctcgatac cgcaacagcc gccgtgttcg agaaggccgt gcgcgagggg
     3781 attctcacgg ttgaggacgc cgaggtgctg cggccggcga tgcgcctcta ccaggatctc
     3841 agccacatcc tgcgcctgtg cgtcgcggcg cccttcgacc cgaaatccgc cggaagtggc
     3901 ctcacgcagc ttctcgccct tgccgccgac gttccggatt tcaacaccct cgaagcgcac
     3961 ctcgccgaca cgcaggcgcg tgtgcgcaac tgcttcgtgc ggatattggg aggggagccg
     4021 tgagactatt gcggcccgga ttgaacaaag tgaaatccgg ggacagccca tccaaaatat
     4081 cgacgccgcg gtttggggca cgggcaggat ttcgcggcgc tcaatccggg ctgcttgctt
     4141 atggggtcga attcaccccg gagaacggcc cgcaatcgtt agtcggcggc gccgccgtgc
     4201 cgatggtggt gttaagcgaa ggcgagttct cgaagtcgaa catgtcctca agcgtatcgg
     4261 cgaattgatc tcggcgcgtc aggtgcggat ggtcgttgcc gcggctgttg aacggcacca
     4321 tgaagcgctt ctcaatcaac gccagcactg aggcgtgatc actgaccgca tgcgatacat
     4381 gatgcggctt ggcgaacggg gacacggcga tgaatggaac ccggaaaccg agctgatcga
     4441 agctcgcgca ttcctcggga aacgggccgg tcgggtttgc cgcaaaggcg gggcagaggt
     4501 ttgcggccgt cgcgacactg ttgccggccg ggttcacctg attggtggaa cattgcgcgc
     4561 cgccgcccgg ttgggcgctg gcgggcagga acgaagcatc ggcgcattgt ccgggcgcga
     4621 tgccgtccgg ggtccgcgtg tcgccttgcg gcgcctgcgg cggcttgacg tgatcgtaga
     4681 agccgccgtg ctcgtcatag gttatgaaga taatcgagtc tttccagtag ggaccgttgc
     4741 gcaccgcatt ggcaagctcg gacaggaatg cctcgccgcg ttgaatgtcg gccggtgggt
     4801 gctcgtcgtt ttcggccgtg cgcgaaaaga agccgaaatt gggatctacg aaggagacct
     4861 gcggcagcgc cggcacgccc ggcactccgg tcacctgcgc caagaacaac gcatagggaa
     4921 ggaaatgggg atcatgcccg ccaagcgtga acagccggaa gctgccaccc gaaggaacgt
     4981 cctggaagta attggcccaa gtgaccgcgt gcgcctccag caaatcgaaa atcgtgcctg
     5041 tcagcggctt gtagccgccc agcgggggta tctcatcgtt tgtggtcaca tggccgaacg
     5101 aagtggccgc catcgcataa gaccggttgg ggaaggtcgg accaagcacg gaactgaagt
     5161 ggcggtcgct gatggcgaat ttctgcgcta ggtcataata gaaggggagc tcggcctggg
     5221 tatagaaccc catcgtctcg tcttcggtcg ggctctccgt tccgttgtcg atctgctcgg
     5281 tcaagtcgtt ctggcgcacg aagccgtcac cgcgaaagtg gcgcagtgat gcgttgggat
     5341 cgtcaaaatt ggcttcgtga tgggtgccga cccagccgtg atcaaggtcc ggcttgacgc
     5401 agcggttggt attgtggaag gcgaagacct tgccggtgcc ggcatctatg ttggcgttgg
     5461 tgcaggagag cgtgccgtcg ctcgccacct tgcagctcag cccgtcgacg cagcggtggt
     5521 cgtcggggcg gcagccgccg gcgtcaccat cgtcgccgtc acggtcgccg tcgtgatcac
     5581 gatcggcatt cgcggaatgg tagacgccac cgggcacata ggcgagcgca ccgaagtaat
     5641 tgtcgaagga atgattttcc tgcatgacga cgatgatgtg cttcaagttt tgcagcgccg
     5701 cgttacgtcc gcgctcattt gccgaagctg tcccagccag aaatacgagc gcaagataag
     5761 cggccaacgc aaagcgatag gatttgagtg tcatgacggc tccctgcaat cgggcacgca
     5821 aacaagctcc tcgcgccgcc tcactggcgc gattgcggcc gacgggatca aggctagcgg
     5881 tcttgcttga tagttcgatg acagtcggat gaggccggag gaaatgccga aaggtgtctg
     5941 aataatgtgc aagatcgcta ccagaatgtt ccattgcaag gaacgacgcg aagcggagcg
     6001 gtgatatgac caagacgtcg ctgtccgatc acttcgatgg cgcacgcttc ttcaacccga
     6061 ccctgccgaa agactttgcg cattctcggc gtagcaccct gcgaatgttg tgcgagccgc
     6121 gcagccggtg gccagcctgg gttgagaaca agggggtgcc ccggctcaat gagtcgctca
     6181 gggcggatca ggtcgccatt acattcgtca accatgcgac ttttctggtc agcaccggtg
     6241 ggatcaatat cctgacggac ccagtttggt ctgagcgggt aagccctttt cgtcgcatcg
     6301 gccccaagcg agtacgcaag cccggcgtga cgttcgagga tctgccgaca attgatctcg
     6361 tcctcttaag ccacaaccac tatgatcacc tggatatcgc gactctgacc cagcttcggc
     6421 aaagcttttc cccaactgtg ttcgctgcgg ccggagatgc gcgggtcgtc gggccgattg
     6481 gatttgagga cctgcgcgag ctggactggt gggacatgat tgagttcaat cacatgctca
     6541 aagtaacgtt cgtgccggcg cagcatttct ccgcgcgtgg cctgtttgac aggcaaaaaa
     6601 gcctttgggg cggctacatg gtcgaaagct gggggcgccg catctacttc gcgggcgaca
     6661 caggatattc aactcatttc tcggacatca aatcccggct gggcagtccc gatatcgcga
     6721 tgctcggcat tggtgcttat gagccgcggt ggttcatgaa gccgatccac atgaatccgg
     6781 ccgaagctgt ctgcgcgcat cgcgacctcg gttccaaaca aagcatcgga atgcacttcg
     6841 ggacgttcag gctcaccacc gaggccatcg accagccgca ggcggacctc aggcgggcgt
     6901 tgttcgaaag cggtattccg gaaagcgaat tcgtcacgct gcatgaaggc gaaacgcgca
     6961 tctattagga cgattgttga ccatcgacgg ccgcgggccg tggccgcgct gccgattccg
     7021 gatttcatca cagcccgtcg aacacgcgcg taaacgcgct gaaaggtcaa ggtgggctgc
     7081 ttgcgcttgc cagcttcgtc ggcaattcaa gttgaaaaat cgaactcttc tcactactag
     7141 gcgacaccca aaaccgaccc agctggctct cgacaatcga acagcacatg gaaacccatt
     7201 cccatactgc gcgtctttgt gggcaggaaa accgagcaac ttggtgtggc accgcaagac
     7261 ttggggctgc agcagcttcg gcgggctaac ccgcattcag ttacggtttg gcgctcctca
     7321 tagaatatta ttcgaattca tagaataatc ctccaattca tggaatattc ttccaatctc
     7381 aatttatccc tcgcttgcca ccctccaccc cccgcagcgg tggatacacc ggtcgaatcg
     7441 cagtgtcgtg acgtgggcaa ggagcagaag gccgcgcctg ccatctcacc gttgtccgac
     7501 gttggacaga tggcccgagt ggctttgact tttgccatag ccagtagcgc cgcactttgc
     7561 gatatataag tgatctgttg caatgcgggt tggtcgagag aggagcgata acatgactga
     7621 aactctccac ccagcagctt cccacaatct gccgtcattc atcacccctc ctggtgagac
     7681 agacatactc atggttgtga tgagcgttgt tctggtgctc gctattttga tgttcggtat
     7741 cttgttcttt cgtttgcata cgctgcccga gcgaatagca cataagaccc acaaagtgca
     7801 gtttgagatc gtcgccgtct tgggccttat tgctctcttt acacacatgc atatcttttg
     7861 gatagccggt ctgctgttgg cattgatcga cgtgcctgat tttggcaact cgctcggccg
     7921 gatcgcggga tcagttgaga aaatcgccgg catagagcca ggcgaaggcg cggccatcgt
     7981 tggcatcaaa caagccgagg aagcggctga ggtagcgcca gagacatatg gggccaggca
     8041 tggcgatggg gtggctgctt tgccgacaac agcccgacaa gccaaaagga gctgagccat
     8101 gcttgagctt cttctctgct ctttagtcac aatttttccc gattatctgt accggcgata
     8161 tgtccaggga aagcggtttg gcaaggaaat aaccttttat tctgtatggt tcgagctgag
     8221 gtggggaatc acgggctgct tgattctcac agtggccctc atcacggtga ttttctacaa
     8281 tcacccgtcg accagcagcg tcacaatgtt ctttaaaacc gttccgatca tttctgagac
     8341 aaacggacgc gtcgctgagg tctatattgg gacgaacggc ccggtgacca agggaatgcc
     8401 gctcttcaag ctggacagct caaagcaaga ggcagcggtg gagaccgcgc ggcgcaagat
     8461 tacggaaatc gacgcgcaga tcgtggtggc acgggctgat gtccgcaaag ccgagggcca
     8521 gctaaaggag gccgagagtg ctcaccaaca gaccgtggac gaactggaga ccaaggaaga
     8581 gctgtacaga cgcaatccag gcaacgttcc gttccgcgag atcgagcgcc tccaggtcca
     8641 agcggaaggc cgcttagctg cgatcgcttc agccacggct gcaaaacagg ctactgagga
     8701 gcaggtttcc acgtttctcc cagccaaaaa agccagcgcc gaaggcgagc tggctgaggc
     8761 cgaagtggaa ttgggaaaga cggttgtccg tgccggcgtg agtgggcgag tggagcagtt
     8821 cgtggtccgg gtcggcgata tcgtcaatcc gttcatgcgt ccggccggag tcttgatccc
     8881 ggagggcatc ggtcagcgaa gcctgcaggc gggcttcggg cagatcgaag cgcagatcat
     8941 gaaagttgga atgacggccg aagtcacatg tgtctccaag ccctggacaa tcatcccgat
     9001 ggtggtcacg gatgtgcagg atgtcatcgc cgctggtcag tttcgtgggg gcgaccaact
     9061 catcgacgcc cagcaggtga cacggcaagg cacccttacg gtgtctctcg agccgctcta
     9121 caaaggtggg ctcgatggta taacactcgg cagcagctgc atcgccaacg cctattccaa
     9181 caaccatgac ctgatcgtat ccaaggacac cggcgctatc aaacgtgcgg ttcttcacgc
     9241 cgtggacgcc ctcgggctcg tacatgcctt gattctgcga ctccaggcgc tgatgcttcc
     9301 tatcaccacg ctcgttttta gcgggcactg aggcaaggca atcggcaacg ctgtgcggca
     9361 cgttcagcac cgttgagccc gcgccgtatt cgggcccgaa cggttaagta ctatcatctg
     9421 tgcggccttc gccttgtagc cttggttgcg cctaatgcat tcactggtac cgggcgcgct
     9481 tcgccattgc cgaaaatctg gtctacttca gtttcgtggc cacggacgat gacaggctaa
     9541 ctcttgaagt ggtacgcgag gtccctaaac ggtttggcgc gaagtcggga atctatgcct
     9601 gttagctaaa attcttggtc aaggttttct tggcttctgc ctctcccaag tcgagaccaa
     9661 aattgtacct tgaaaagaca tcggaagttt cacgcagttc acttcccgac ggacagctac
     9721 ttctcggcgt aaaattgatg gttgcggcat tgtgatgggc tagacaaatc ccgccgggtg
     9781 accggaggga ttgccaggcg ctattcgagc cgacttgcgg ggctgcctgc ttttccaggg
     9841 cgcgagcgat attgacgagg ttgtcagcaa tgacgccgag gcccacccac cggtagattg
     9901 cgatgtcgcc ttgtagcggc agcgggcgag gcccaggagt caaccccaaa ttcgttcgct
     9961 cttgcaggtt tcggcctccc cgcggattct gacaccggta cgacctgttc gaattttgcg
    10021 ccggagctag agtgcgtgcc ggtcatattg aacgacctat ccggcgtcat ggctgggctt
    10081 tgtcccggcc tgtagccatc ggcaggcgca ccagaacaac cgtgccgcga ttgacgttcg
    10141 agcggatgcg caaggtgccg ccgtgaagct cggccaacga tttcgctatg gcaaggccga
    10201 ggccggatcc ctgatgggtc ttggtcagaa ggctttcaac ttgctcgaag gggcggccaa
    10261 tttttttcag cgcgtccttc gagatgccga tcccagtatc atcgaacatg aaggccaagg
    10321 cgctggcgtg gacgcgggcg cgcacccgca cgtgcccgcc ttccggcgtg aacttgacgg
    10381 cgttcgataa caggttgatg gcgatttgct tgatggcgcg cttgtcggcg cgcaatttca
    10441 tgccgggcgt gacgtcggtg accatggcaa gccgcttctt cgccgcgcga ccggacacca
    10501 cccgcatggc ctcgtcgacg atctcgtcga cctcgaaatc ctcgaagtc
//
LOCUS       DATILV010000485         3116 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_368976, whole genome shotgun sequence.
ACCESSION   DATILV010000485 DATILV010000000
VERSION     DATILV010000485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3116)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3116)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3116
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_368976"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(307..2586)
                     /locus_tag="VLJ17_11015"
     CDS             complement(307..2586)
                     /locus_tag="VLJ17_11015"
                     /inference="COORDINATES: protein motif:HMM:NF015168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF255 domain-containing protein"
                     /protein_id="HSV23547.1"
                     /translation="MLAWTTFAAAFFVVPATADTAPEVHTNRLIDSATPYLLQHAHNP
                     VDWYPWGEEAIGKARKENKLIFLSIGYSTCYWCHVAERTIYSNRSIAALMNQWFVNIK
                     VDREERPDLDASFMLARQVLTSSGGWPNNLFVTPDLKPFFAGSYFPPEDQGDTNGFPT
                     ILKLIHEDWEKNPAKIKAIGDQVQAALEQAHDAGGKPASVSTLMPANWLATARDQVLS
                     QRDKVYGGFDGGGGTKFPQAPVLTLLLADYRLNGTAESLEAVAATLNAMAFGGVHDHL
                     GGGMHRYSTEPTWSVPHFEKMLYDNAQLIGLFADYYAITRQPLARDTAVDLAGYLAKR
                     MTAPDGGFYTAEDADIEGKEGESYLWTRAEITDVLGSADAKRFFGLYELTPLQDEPKG
                     PGVLRIRRDQIASEENRANLQGRVAELAQLRDRLLEFRDQRRQPLRDDKIVVALNGLA
                     ITGLTRAGKILGEPQWIASASRAGEFLWQHAFDERNGRLRHHIFRGEAAGEGFLDDYA
                     MLGLAYLALAEATGDQVWVSRAQALASAILARFIKPDGLVVTSVADASLVTPAIDLDD
                     HDMPSGTSGAYALLAQLGRTEARYAEAATKMLARMADKIQSAPAAWASLTTYAVLYGQ
                     TVQVKTEAALDSAAHVKAAAQGASYPDHDEILVTLSIDPGYHLNANPASIDYLIPTAV
                     TVPSAPDAKISYPVGQVFKPKFSPEGISVYEGSVAIRADLPKGSIASAAREPLRVEVQ
                     ACTAQLCLPPATLITSVSQ"
BASE COUNT          621 a          904 c          929 g          662 t
ORIGIN      
        1 gtcctttcgt tcgccgcgcg gatatttggc tctagcccac gcaccggcgc tgcaccgaat
       61 ggaccctagg ctacagccat attttgctgg tcactatgcg gaaacggcgg gaagctcgag
      121 tgtccgcttt gggtcattag cggacacaac ggcccgtccg cgtcatgtcc gttattcccc
      181 tcaaagcgga cattcttcag cgcggtttgc acgcccgcta agtgccaaaa gcggacattc
      241 gtcagcgcag taagtatgtc tgctttgtgc cagaaacgga catacagggg gagtccctcg
      301 cggcgatcac tgacttacgg atgtaatgag agtcgccgga ggaaggcaga gttgggccgt
      361 gcacgcctga acctcaacgc gcagcggctc acgtgctgcg gaagcgatgc tgcccttcgg
      421 caggtcggcc ctgattgcaa ctgagccttc gtaaactgaa atcccctcgg gcgagaattt
      481 tggcttgaag acctgtccta cggggtaact gatcttggca tcgggtgcgc ttgggactgt
      541 caccgcggtc ggtatgagat agtcgatcga agcgggattg gcattcaggt ggtagccggg
      601 atctatgctg agggtaacga ggatttcgtc gtggtcggga taagaagctc cttgggcggc
      661 cgctttaaca tgggcggcgc tgtccagcgc cgcttccgtc ttaacctgta cggtttgccc
      721 gtaaagtacg gcgtaggtgg taagacttgc ccaagcggcg ggtgcagatt gaattttgtc
      781 cgccatgcgc gccagcatct tggtcgctgc ctcggcatag cgcgcctcgg tcctgcccaa
      841 ttgcgccaga agcgcatagg cgcccgatgt ccctgagggc atatcgtgat cgtcgagatc
      901 gatcgccggc gttaccaagc tcgcatcggc caccgaggtg acgaccaagc cgtcgggctt
      961 gatgaagcga gccaggatgg ctgaggcgag agcctgcgcg cgcgacaccc agacttggtc
     1021 gccggtcgcc tctgcgaggg caagataagc gaggccgagc atcgcgtaat catcaaggaa
     1081 gccttcgccc gccgcctctc ctcgaaagat atggtggcgg aggcgcccgt tcctttcatc
     1141 gaaggcgtgt tgccagagga actcacctgc ccggctcgcg gatgcgatcc attgcggctc
     1201 gccaaggatt ttgcccgcgc gcgtaagtcc ggtgatcgca agcccattca gggctacgac
     1261 aatcttgtcg tcgcgtagcg gctggcgcct ctgatcgcgg aattcgagca gcctatcccg
     1321 caattgggca agctcggcca ctctgccttg aaggttcgct cggttctcct ctgaggcaat
     1381 ctgatcgcgg cggattcgca atacgccagg gccttttggt tcgtcttgca gtggggtcag
     1441 ctcatacaga ccgaaaaatc gcttggcatc tgctgatccc aggacatctg tgatctcggc
     1501 ccgagtccac agatagcttt cgccctcctt gccttcaatg tcggcatcct cggcggtgta
     1561 gaaaccgccg tccggtgccg tcatgcgctt cgcaaggtaa cccgcaagat caacggccgt
     1621 gtcgcgcgcg agcggctgac gcgtgatcgc atagtagtcg gcaaagagcc cgatcagttg
     1681 ggcattgtcg tagagcatct tctcgaaatg tgggacggac caggtcggct cggtgctata
     1741 gcggtgcatc ccgccgccga gatggtcgtg gacgccgcca aacgccatgg cgttaagcgt
     1801 tgcggcgaca gcctcaagag actcagcagt gccgttcagg cgataatctg ccagcagtaa
     1861 ggtgagcaca ggcgcttgcg gaaatttcgt tcccccgccc ccatcgaagc cgccatatac
     1921 tttgtcacgt tgactaagga cttgatcgcg cgccgttgcc agccaattgg ccggcatgag
     1981 cgtcgacacg ctcgcgggct tgccgccggc gtcgtgcgcc tgctccagcg cggcttgcac
     2041 ctgatcgccg attgccttga tcttagccgg gttcttttcc caatcctcat ggatcagctt
     2101 gagaatggtt ggaaagccat tcgtgtcccc ctgatcttcc ggcgggaaat aacttccggc
     2161 aaaaaagggc ttgaggtccg gcgtcacgaa caggttgttt ggccatccgc ctgagctcgt
     2221 caaaacctga cgtgcgagca taaagctggc atcgagatcg ggtcgctctt ctcgatccac
     2281 cttgatgttg acgaaccact gattcatcag tgcggcgatg gaacgattcg aatagatcgt
     2341 ccgctcggcc acatgacacc agtaacaggt gctgtagccg atggagagga agatcagctt
     2401 attctccttt cttgccttcc caatcgcttc ctcaccccat ggataccagt cgactgggtt
     2461 atgggcgtgt tgcagcaaat agggagtagc ggagtcgatc agccgattcg tatgaacttc
     2521 cggcgccgta tccgcggttg ccgggacaac gaagaaagca gccgcgaacg tggtccaagc
     2581 taacaacagc gggagcgatc gcagcgaggg aaagcggctt cgcgacacta tagagagcat
     2641 aactgaactg ctcgcgaccg gcgattggct gcagccttgg cttcaccgca agacggtcac
     2701 aggggatgcc gaacaatcgg atcctaccct gagttttagg gttggaaagg taagtaaagc
     2761 gtctgtatgg ggctcaactc aacctagccg ttggcccgcg aggcgcttgc accaacggca
     2821 cgcccgacat gccgctgaaa tgtccgcttt gggtcattag cggacatcgg ccaatcgatc
     2881 agggatgtcc gctttgcccc cgaaagcaga catgtgcagc gtcaagatcg atgtctgctt
     2941 tgtgccaata gcagacattg agcaccaagc ccaaccactg cttcgtcgcc cctcctggga
     3001 gcaaagccat tctgtgacga atttcggggc ctcttcccgt cgcaggattt tgtggtcaag
     3061 ctcatcgcac tctgagcctc tcacctacga gaaagtgagt ttgatgtcgg gctggt
//
LOCUS       DATILV010000486         1655 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1135237, whole genome shotgun sequence.
ACCESSION   DATILV010000486 DATILV010000000
VERSION     DATILV010000486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1655
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1135237"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            53..955
                     /locus_tag="VLJ17_11020"
     CDS             53..955
                     /locus_tag="VLJ17_11020"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HSV23548.1"
                     /translation="MELRHLRYFVGVGEEQHFGRAASRLHIAQPALSRQIQDLEKEIG
                     FLLFDRLPRGVRLSAAGKLFLSDARRILDDVDEARRRAERVALGQAGTLRIGVATAVS
                     WHGSVVNVFREFRRRHPDVELILNHMVSVHQVEAVVSNRLDAGFAAAVTPWHKELEHR
                     QFALDRMVLAVPKGHPLMKRESIRLRDLRNEPFVWFHRWVNPAVYDQLMNVCARRGLR
                     SPRVVQEATDRDTVLGLVQCQIGIAWVTESTRWQCPRGIALLPVVDMDVRLPFNLIWK
                     KGNASPLLQAFVARVEAAKASVSE"
     gene            1300..1373
                     /locus_tag="VLJ17_11025"
     tRNA            1300..1373
                     /locus_tag="VLJ17_11025"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1334..1336,aa:Pro,seq:cgg)
BASE COUNT          330 a          439 c          537 g          349 t
ORIGIN      
        1 ccgataggtc taagattttg tttttatcca tccaatacct ggaaggtatc aaatggaatt
       61 gcgacatttg cgctatttcg tcggggtcgg ggaggagcag cacttcggtc gcgcagcgtc
      121 gcggctgcat atcgcgcagc cggcgctgtc gcgccagatc caggacttgg agaaggagat
      181 cgggtttctc ctgtttgacc gattaccgcg tggcgttcgg ctgagcgcgg cggggaagct
      241 gttcttgagc gacgcgcgac gtatcttgga cgacgtcgac gaggcgaggc gccgcgccga
      301 acgggtggct cttggccaag ccggtacgct tcgaatcggc gtcgctacgg ccgtgtcctg
      361 gcatggctcg gtggtcaatg tgtttcgtga attcagacgt cgccatccgg atgtggaact
      421 catacttaat cacatggtgt cggttcacca agttgaagcc gttgtctcaa atcgattgga
      481 cgccgggttt gccgccgcgg tcacgccgtg gcacaaggag ttggaacacc ggcagttcgc
      541 gttggacaga atggtcctcg ccgtgccgaa agggcatccg ttgatgaagc gagaaagcat
      601 tcgacttcga gatcttcgga atgagccatt cgtctggttt catcgctggg tcaatcccgc
      661 tgtctatgat caattgatga acgtgtgtgc tcgccgcggc ctgcgctctc cacgcgttgt
      721 tcaggaagca acagatcgag ataccgttct gggtctagtc cagtgccaga ttgggatcgc
      781 ttgggtcacg gaatccacac gatggcagtg ccccagaggc attgcgttgc taccagtcgt
      841 cgatatggac gttcggctcc catttaatct gatttggaag aaggggaatg cgtcgcctct
      901 gctgcaggcg tttgtcgctc gggtagaagc cgcaaaggca tccgtctcgg agtgattaag
      961 ggcgacggca gctggctctt ggctcccttt acacacttga atcgctcaaa gcgcgtctcg
     1021 aaaatgcgcc agaggagacg gattccgact gagacgaatc caaccggcgg cgcagcggtc
     1081 agagcggtta gggcccgtcc aaagccgagc atggttgaat acctcgagcg gggctgcgat
     1141 cccaaaaagg ggagtgctag ggtgggccgc attcgttagg ctgtcgttag ggctataggc
     1201 ggtatgacgc gaatcgtgaa ggaactcagg acttctgagc tcggttcggg aacgagaacc
     1261 gagtgacctg aggctgaaac ggtcgacgtg tgattatgtc ggggcgtggc tcagcctggt
     1321 agagcgtccg gttcgggacc ggaaggtcgc tggttcgaat ccagtcgccc cgattactcc
     1381 tctctggatc caacctcgcc gagagggcga tatccgcctg agtcaatcca agccagaaga
     1441 acgagacatt caacaagttc gaggatttgc acgaggcgag ccgtgacgta gccaaacgct
     1501 gcgcgcctca gtggagcgtg cggggctcgt cggtcccgga gagcatcgac cggatcctcg
     1561 ccgcgaggcg gctggacgcc ttgcggaaga tgacacgccc aggcacgctc atgatgatcg
     1621 cggtgcccat acccggcggg aaggtcttcg gcaag
//
LOCUS       DATILV010000487         3226 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4458271, whole genome shotgun sequence.
ACCESSION   DATILV010000487 DATILV010000000
VERSION     DATILV010000487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3226)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3226)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3226
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4458271"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..754
                     /locus_tag="VLJ17_11030"
     CDS             <1..754
                     /locus_tag="VLJ17_11030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV23549.1"
                     /translation="KTEARLQELQSELVHISRLTAMGEMASALAHELNQPLSAITNYM
                     KGSRRLLETQADETSAMVREALEKASEQSLRAGQIIRRLRDFVARGEAERRVESIKKL
                     IEEASALALVGAKEHGIRVRFQFDPSVDVVLADRVQIQQVLVNLMRNAIEAMEQSERR
                     ELLLSTAPAEDGMVSVNVTDTGTGIAPEIASQLFQPFITTKPHGMGVGLSISRTIIEA
                     HGGQIWVEPNPNGGTVFRFTLRAVNKEDLGDA"
     gene            747..1373
                     /gene="fixJ"
                     /locus_tag="VLJ17_11035"
     CDS             747..1373
                     /gene="fixJ"
                     /locus_tag="VLJ17_11035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012173174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0045893 - positive regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator FixJ"
                     /protein_id="HSV23550.1"
                     /translation="MPNPVVHVIDDDDAVRHSLEFLLRTAKLEVRAYESAATFLKSLP
                     DLATGCIVTDVRMPDVSGIDLLRRLRDLGFKMPVIVMTGHGDVPLAVEAMKIGAIDFF
                     EKPFDDDAMLAAVRAALGDWERAAHRNAERTELLDRLASLSNRERDVLEGLVAGKPNK
                     TIAYDLGISPRTVEIYRANAMTKMKAGSLSELVRMALIAGLLHSDREE"
     gene            1470..1859
                     /locus_tag="VLJ17_11040"
     CDS             1470..1859
                     /locus_tag="VLJ17_11040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012320219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV23551.1"
                     /translation="MQHNRQPKRSTTPVLVVDDDQAVRHALMFSLQVEGFVVRTYANG
                     RDLLDDPAPPPECCLVIDQFMPGISGLDVVAALRRRCVSWPAILITTQPSAMLLRRAT
                     EAGVQVVEKPFFNDMLFHCIRDALAEH"
     gene            2081..2485
                     /locus_tag="VLJ17_11045"
     CDS             2081..2485
                     /locus_tag="VLJ17_11045"
                     /inference="COORDINATES: protein motif:HMM:NF013777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSV23552.1"
                     /translation="MFMQMPIGSSPKSDASSPSSRREPKCICPADVVLGMIAARWATS
                     IIERIGEYGSLHFGALKRAVPGISKKVLTEQLRRLERARILRREHIPAARPQMLYSLT
                     TRGQELKNVIDSLGELGARWQREDVNDAAFSA"
BASE COUNT          646 a          991 c          989 g          600 t
ORIGIN      
        1 aaagaccgaa gcgcggctcc aggagctgca gtcggaactg gtacacattt cgcgactaac
       61 ggcgatgggc gagatggcgt ccgccctcgc ccatgaactc aaccagccct tgtcggcgat
      121 caccaattac atgaagggat cgcgccggct cctcgaaacg caggccgacg agacgtcggc
      181 catggtccgc gaggcgctgg aaaaggcgtc cgagcagtcg ctgcgcgcgg ggcagatcat
      241 ccgtcgcctg cgcgatttcg tcgcgcgcgg cgaggccgaa cggcgagtcg aaagcatcaa
      301 aaagctgatc gaggaggcaa gtgccctcgc gctggtcggc gccaaggaac acggcattcg
      361 ggtgaggttt cagttcgatc cttcggtcga tgtcgtgctc gccgacaggg tgcagattca
      421 gcaggtcctc gttaatctga tgcgcaacgc catcgaagcg atggagcaat cggagcggcg
      481 cgagttgttg ctgtcaacgg caccggccga agacggcatg gtcagcgtca atgtaaccga
      541 cactggtacc ggcatcgccc cggagatcgc ctcgcaattg ttccagccgt tcatcaccac
      601 taagccgcat ggcatgggcg tcggcctctc gatctcgcgc accatcatcg aggcgcatgg
      661 cggacaaatc tgggtggagc ccaatcccaa cggcggaacc gtgtttcgct tcacgctgcg
      721 cgcagtgaac aaggaggacc tcggcgatgc ctaatcccgt ggtgcacgtg atcgacgacg
      781 atgatgccgt ccggcattcg ctggaattcc tgctgcggac cgccaagttg gaggtgcgtg
      841 cctacgagtc ggccgcgacc ttcctcaaat cgctgcccga cttggcgacc ggctgcatcg
      901 tcaccgacgt ccgcatgccg gacgtctcgg gcatcgacct gctgcgacga ctgcgcgatc
      961 tcggcttcaa aatgcctgtg atcgtaatga cgggacacgg cgacgtaccg cttgcggtcg
     1021 aggcaatgaa gatcggcgcc atcgacttct tcgagaagcc gttcgacgac gacgccatgc
     1081 tagcggcggt ccgcgcggcg ttgggcgact gggaaagggc cgcgcaccgc aacgccgaac
     1141 ggacggagtt gctcgatcgt ctggcgtcgc tctccaaccg cgagcgcgac gttctggagg
     1201 gtctggtcgc cggaaagccc aacaaaacaa tcgcctacga tctgggtatc agcccgcgga
     1261 ctgtcgagat ttatcgcgcc aacgcgatga ctaagatgaa ggccggttcg ctgtctgaat
     1321 tggtgcgcat ggccctgatc gcgggattgc tgcacagcga tcgggaggag tagttcgcgg
     1381 cctgccgacg ttgcgctaga tcaaggcgcc cggcgccctt tcccggctat ttggtttgtc
     1441 cggctcgcga cggggtcggg gcaaaggcca tgcaacacaa tcgccaacca aagcgctcga
     1501 ccaccccagt gctggtggtc gatgacgacc aagcggtgcg ccatgcactc atgttctcgc
     1561 tccaggtcga gggcttcgtt gtgcgcacct atgccaacgg gcgcgatttg ctggatgatc
     1621 cggcccctcc gcccgaatgc tgtttggtca tcgatcagtt catgcccggc atatctgggc
     1681 tggacgtcgt cgccgcccta cgccgccgtt gcgtttcatg gcccgccatc ctcatcacca
     1741 cccagccgag cgctatgctg ctaaggcgtg cgaccgaggc cggcgtgcag gtggtcgaga
     1801 aaccgttctt caatgacatg ctattccatt gcattcgcga tgctctcgcc gaacattgat
     1861 gcctccgatg cgacaatcgt ctaatccgct gcacgaggcc ggcggccggc aagaccatag
     1921 gaagcgccac gaattgtcgg ttcaaccgcc tgatcatagt cctcgaccat gatggcgccc
     1981 ggcacctccg ggtcagccct tagggaggtt atctgaattt tccgatctta gtacggctgg
     2041 taattacgag agagttaaat ttaggtttcg ataaacggcc atgttcatgc agatgcccat
     2101 cggcagctcc cccaagtcgg acgcatcaag tccgtcctcg cgacgcgagc cgaaatgcat
     2161 ctgccctgca gatgtcgttt tgggcatgat agccgcgcgc tgggcgactt ccatcatcga
     2221 acggattgga gagtatggat cgcttcattt cggcgctctc aaacgagccg ttccgggaat
     2281 ttccaagaag gttctgaccg aacaacttcg ccgtctggag cgtgcccgca ttctccggcg
     2341 cgaacacata ccggcggcgc gcccgcaaat gctctactcg ttgaccaccc gcggtcaaga
     2401 gctgaagaac gttatcgaca gcctgggaga gctcggcgca cgctggcaac gtgaagacgt
     2461 caacgacgct gcattctccg cttgaaggcg atcgagttcg gcgacgggca ctaacgaggt
     2521 ggttaaaccc tgcgcactga gcaccgtcac cgttcggtct ctgagctcac ccgggagaag
     2581 atcgataacg gtatcttgca gtcccatgca gaccgtcccg gtgccgcgct ctcaatccta
     2641 atgatgctga ggatcctgat ccgtcacgcg aggggcttcg ggtcggcgtc gacctgggct
     2701 tgcacagcga attgcaaaag gcgctggcca ccgcgccacg cgatcacgcc actatcatca
     2761 acaccgagta cgggaagccg ttcaccggca acggcttctc gcagttcatg cgcgccgcaa
     2821 ttgggccgcc gcatggcaga tgccgggtgc tcagctcacg agattatggc agcactcggc
     2881 cacatcacgc tggcggaagc ggaatgctac atggtggggc cggccggcgg cgcggtggtc
     2941 gccaagcagt aatcaagctg gaagcacaca acgcgtcctc ggaggcgcgt tcacagcagg
     3001 ggaggatggt ttcgtgtcaa gggaaggcat ggtgggtccg aaacaaagcg acgacgtgtt
     3061 tcaccgagcc caggctggca ccctagagcg ggggagccgc tccagggtcc agcggctttg
     3121 tccagtccca cgtggacggt gagcccggag accaccaaag tgcataacac cgttgcatcg
     3181 atttcgatcg atcgttgcgg caacaaacag tacagaccat atcgtc
//
LOCUS       DATILV010000488         6138 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_370079, whole genome shotgun sequence.
ACCESSION   DATILV010000488 DATILV010000000
VERSION     DATILV010000488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6138
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_370079"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            22..1578
                     /gene="purF"
                     /locus_tag="VLJ17_11050"
     CDS             22..1578
                     /gene="purF"
                     /locus_tag="VLJ17_11050"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004044 - amidophosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HSV23553.1"
                     /translation="MDPHQAGSLPDRGDDRINLDRTGDCLEQDRDGDHRDFDLDINGD
                     RLREECGVFGIYGHPDAAAITALGLHALQHRGQEAAGIVSFDGRRFHSERRLGLVGDT
                     FSRREIIDHLPGSIAIGHVRYSTTGGTVLRNVQPLFSELNAGGFAVGHNGNLTNGLTL
                     RRQLVRDGAIMQSTTDTEVILHLLARSGHRRFIDRFIDALRQLEGSYSLAALTNKKLI
                     GARDPLGIRPLVIGELRGCPIVTSETCALDIIGARYVRDVDNGEVVVYSEEGAQSLKP
                     FPPMRPRPCIFEYIYFARPDSVVGGRSVYQIRRRMGMELAGEAPAAADVVVPVPDSGV
                     PASIGYAQAAGIPYELGIIRNHYVGRTFIEPTQSIRELGVRLKHNANRSVVAGKRIVL
                     IDDSLVRGTTSVKIVRMMREAGAAEVHFRIASPPITHPDFYGIDTPERDKLLAANHTV
                     EEMREIIGADSLAFLSVEGVYRAMGEEHRDPLRPQFTDHCFTGDYPTPLTDRADTAAP
                     RQLSLLAEAS"
     gene            1575..2318
                     /locus_tag="VLJ17_11055"
     CDS             1575..2318
                     /locus_tag="VLJ17_11055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSV23554.1"
                     /translation="MNARLLTDRIALVTGASRGIGAATALALGRAGAHVVAVARTIGG
                     LEELDDAVGAVGGSATLVPLDVTDFAGLARLAGALNERYGRLDILVGNAAVVGPSSPL
                     DHITLQDWDEVMKVNVTANWQLICAMDALLRRSDGGRAVFLTSGAAHNMRPYRGLYST
                     SKAALEAIVRTYAAETERTAVRVNMFSPGPTRTRMRAQVMPGEDPKTLPPPEEVAEKI
                     VELCLPGFSETGRLYDFRTRKLMAFRKPE"
     gene            complement(2442..3713)
                     /locus_tag="VLJ17_11060"
     CDS             complement(2442..3713)
                     /locus_tag="VLJ17_11060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006610991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TCR/Tet family MFS transporter"
                     /protein_id="HSV23555.1"
                     /translation="MLQSESPTTAKPFQTGRAPRRAAFAFVFVTVVLDMLAIGIIIPV
                     LPKLVVDFLGGDAVEAAHVYGLFGTVWALMQFVFSPIQGALSDRLGRRPVILISNVGL
                     GLDYVVMALAPSLAWLFLGRVISGITAASISTSFAYVADVTPPEKRAARFGLLGAGFG
                     VGFVLGPALGGLTGAIDPRLPFWIAAGLSLANALYGFFVLPESLPPERRAPFAWRRAN
                     PVGALALLRSQTTLIGLASVNFLGSLAHAALPAVGVLYMMYRYGWTERTVGLTMAGVG
                     VAAIVVQGGIIGPAVKRFGERRALIIGLTFGVAGLTMFGLAPTGPVFWLGIPLMALWG
                     LANPSAQGLMSRRIGPHEQGQLQGANASLMGLANLIGPGLFTMTFAFAIGAARQWGMP
                     GAPYLLAAMLLALAIMVALRVTGSAGVSPVG"
     gene            4102..4311
                     /locus_tag="VLJ17_11065"
     CDS             4102..4311
                     /locus_tag="VLJ17_11065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23556.1"
                     /translation="MVRFFLISACTHRLSMDPNGNVTSLAWPANAPHMASYAGAVQHQ
                     RSGQTASDATFRPSGLAAGSARTPV"
     gene            complement(4416..5849)
                     /locus_tag="VLJ17_11070"
     CDS             complement(4416..5849)
                     /locus_tag="VLJ17_11070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008961882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C"
                     /protein_id="HSV23557.1"
                     /translation="MAGIEYLDVARLKYLKVVISLALRSIAGVLAAVVVMLVTMPKAD
                     ALPSFARQTGLACGACHTSFPQLTPTGRRFKLMGYTQTAPDTKPLGSSGWLPPVSGMT
                     IFGFTHTNTPIDNAGSLLHQNDNVVLQQGSMFYGGAITEHVGAFVQATYAGPQFGPPP
                     ASQFMWDNLDVRYANTTKVGGMPVIYGVSVNNNPTVQDVWNTTPAWGYPFVASSLANT
                     PDAKTLIDNAFAAHVLGATAYAFINDMIYLEGGGYGALQSSLQSSLGVVAQDGPQTTG
                     AIPYFRAAFAPSWGNHSFEIGAFGLSANVTPAGVVSSGFDQFHDIGIDSQYQYMGDGF
                     VVTLRGTYLHENQLLNASFASGLAANTTNTLNTFRAQAELALGGSVNKFILTGGYFNT
                     WGSSDTILYGGNRTFSPNSDGWVAEIAYMPFGKTNPPALWPWFNAKIGLQYVWYNKFN
                     GASVNFDGMGTNARDNNTLFAYFWASF"
BASE COUNT         1204 a         1951 c         1855 g         1128 t
ORIGIN      
        1 gcggaggcga atggagcgat gatggatccc caccaagccg gcagcctccc ggatcgcggc
       61 gacgatcgta taaaccttga tcgcacaggc gattgtctcg aacaggatcg cgacggcgac
      121 catcgggatt ttgacctcga catcaatggc gaccggctgc gtgaggaatg tggcgtgttc
      181 ggtatttacg gccatccgga tgccgccgcc atcacggcac tcgggctgca tgcgctccag
      241 catcgcggcc aggaggctgc tggcattgtc agctttgacg ggcgccggtt tcattcggag
      301 cgccggctcg gcctcgtcgg cgatacattt tcccgccgcg agatcatcga tcacctgccc
      361 ggcagcatag cgatcggcca cgtgcgttat tccactaccg gcgggaccgt gttgcgcaac
      421 gtccagccgc tgttctccga actcaacgcc ggaggttttg cggtcggcca caatggcaat
      481 ctcaccaacg ggctgacgct gcgccgccag ctggtgcgcg acggcgccat catgcagtcg
      541 accaccgata ccgaggtgat cttgcatctc ttggcgcgct cgggtcacag gcggttcatc
      601 gaccgcttca ttgatgcgct gcgccagctc gaaggttcgt attcgcttgc agcgctgacc
      661 aataaaaagc tgatcggcgc ccgcgatcca cttggcattc gcccgctggt gattggcgag
      721 cttcgcggct gtccgatcgt gacgtcggag acctgcgcgc tcgacatcat cggggcgcgc
      781 tatgtgcgcg acgtcgacaa cggcgaggtg gtggtctatt ccgaagaggg tgcacaatcg
      841 ctcaagccgt ttccgccgat gcggccgcgg ccctgcattt ttgaatacat ctatttcgcc
      901 cggccggact cggtcgtcgg cggccgcagc gtctaccaga tccgccgccg catgggcatg
      961 gagcttgccg gcgaggcgcc cgccgcggcc gacgtggtgg tgccggtgcc ggatagcggt
     1021 gtaccggcgt cgatcggcta tgcacaggcg gccggcatcc cgtatgagct cggcatcatc
     1081 cgcaaccatt acgtgggccg caccttcatt gagccgaccc aatcgatccg cgagctgggc
     1141 gtgcgcctta agcacaacgc caaccgctcg gtggtggccg gtaagcgcat cgtgctgatc
     1201 gacgacagct tggtgcgcgg caccacctcg gtgaagatcg tgcgcatgat gcgcgaggcc
     1261 ggcgccgccg aggtgcattt ccgcatcgct tcaccgccga tcacgcatcc ggatttctac
     1321 ggcatcgaca cgccagagcg cgacaagctg ctcgccgcca accacaccgt ggaggagatg
     1381 cgcgagatca tcggtgccga ctcgctcgcc ttcctatcgg tcgaaggcgt ctaccgcgcc
     1441 atgggcgaag agcaccgcga cccgctgcgc ccgcaattca ccgaccactg cttcaccggc
     1501 gactatccga ccccgctcac cgaccgcgcc gacaccgccg cgccgcgaca gctttcgctg
     1561 ctggcggagg cgagttgaac gcgcggcttc ttaccgatcg catcgccctc gtcactggcg
     1621 cctcgcgcgg catcggggcc gcgaccgcgc tggcgcttgg cagagccggc gcccatgtgg
     1681 tggcggtggc gcgtaccatc ggcgggctcg aggaactcga tgacgccgtc ggggcggtcg
     1741 gcggcagcgc cacgctcgtt cccctcgatg tgacggattt cgccgggctt gcccggctcg
     1801 ccggcgccct taacgagcgc tacggacggc ttgacattct ggtcggtaat gcagccgtcg
     1861 tcgggccttc atcgccgctt gaccacatta cgttgcagga ctgggacgag gtcatgaagg
     1921 tcaacgtcac ggcgaactgg cagctcatct gcgccatgga tgcgctgctc aggcgctccg
     1981 atggagggcg cgcagtgttt ctgacctcgg gcgccgcgca caacatgcgc ccctatcggg
     2041 gactttactc gacgtcgaaa gccgccctcg aggccatagt gcgcacctac gcggccgaga
     2101 ccgaacggac ggccgtgcgg gtgaacatgt tcagtccggg cccgacccgc acccgcatgc
     2161 gagcgcaagt gatgcccggt gaagacccaa agacgctgcc gccgccggaa gaggtggcgg
     2221 aaaagatcgt cgaactgtgc ttaccgggat tttctgaaac cggacggctt tatgattttc
     2281 ggacccgcaa gctgatggcg ttccgcaagc cggaataacg cggccaatcg gtaggggtct
     2341 ggcacgatcc agcgaaaata acaacgagtc tctctcggcg ctggtgggca tggcgcgata
     2401 ggtcaaggca agtgtggccg tgcccggcgc cttcgcccac cctaccccac tggcgagacg
     2461 cccgcgctcc cggtcacccg caacgccacc atgatggcga gcgccagcag catcgcggcc
     2521 agcagatatg gcgcaccggg cataccccat tggcgcgccg cgccgatcgc gaaagcaaac
     2581 gtcatagtga acaaccctgg gccgatcagg ttggctagcc ccatgaggct cgcattggca
     2641 ccctgtaact ggccctgctc atgcggacca atgcggcggc tcatcaggcc ttgggccgat
     2701 gggttcgcga ggccccacag cgccatcagc ggaatgccga gccagaaaac cggcccggtc
     2761 ggcgcgaggc caaacatcgt aaggcccgcg accccgaacg tgaggccgat gatgagcgcc
     2821 ctgcgctcgc cgaaccgctt gacggccggt ccgataatgc cgccctgcac cacaatggcg
     2881 gcgactccga cgcccgccat agtgagaccg acggtgcgct cggtccagcc atagcgatac
     2941 atcatataca gcacgccgac ggccggcaga gccgcatggg caagactgcc gaggaagttg
     3001 acgctcgcga gcccaatcag cgtcgtttgc gaacgcaaca gcgcaagcgc gccgaccgga
     3061 ttggcacgcc gccacgcgaa cggcgctcgg cgctcgggcg gcagcgattc cggcaagacg
     3121 aaaaagccat aaagcgcatt ggccaggctg aggcctgccg cgatccagaa cggcagccgc
     3181 gggtcgattg cgccggtgag cccgcccagc gccgggccga gcacgaagcc tactccgaag
     3241 ccggcaccaa gcagaccgaa gcgcgccgcc cgcttttccg gcggcgtcac gtcggccaca
     3301 taggcaaacg aagtcgaaat gctcgccgcc gtgatgccgg agatcacgcg gccgagaaat
     3361 aaccacgcga gcgacggcgc cagcgccatc accacgtagt cgaggccgag cccgacattg
     3421 gatatcagga tgacgggccg gcgcccgagc cgatccgaca gcgcgccctg aatcggcgag
     3481 aacacgaact gcatcagcgc ccacacagtt ccgaacaggc cgtagacgtg cgccgcttca
     3541 acggcgtcgc cgccgagaaa atcgacaacg agcttcggca acaccggaat gatgataccg
     3601 atggccagca tgtcgagcac gacggtgaca aacacgaagg cgaacgcagc acgacggggc
     3661 gcccggccgg tttggaatgg cttggcggta gttggtgact ccgattgcaa gatgtgacct
     3721 catttttttt acgtaagtcg cccgtctctg agcaatgagg ctttcccttg gccgaaacca
     3781 agcaaaaaat ctatcatgtg cagcggttgc tgcgatcagc tcacgttgaa cgttgggtgc
     3841 cgtcatactg accgccgcga gaaacgcttc cggtattgtc agtgctactg atcgtcatgg
     3901 cgctcgacac cgcgcatgtg cattcactgc ggtggggctt cgaaggcacc gggattgtca
     3961 ctgttctgcc ttttcattct gcggtcctgt ttgcgtttcg tgcgtgatca ggagcgaggg
     4021 cgggatttgc ttggtcgcag catcttccgc catctgcttg cttcttcttg cagttctctt
     4081 ggcggcttct ttggtggagg aatggtgcgc ttttttctga tatcggcttg cacccaccga
     4141 ctatctatgg accccaatgg caatgtcacc tcgctggcgt ggccggcgaa cgccccccat
     4201 atggcgagct acgctggcgc agtgcaacac cagcggtcgg ggcagacggc ctccgacgcg
     4261 accttccggc cgtccggact ggcggcgggc tcggcacgca caccggtcta gctctcttga
     4321 gtctcatcgc cgcactcttc ggtccctctc catgcattga tagacttgga gacagacacg
     4381 cctttgagcc tacctcaata accgcagcat cgcactcaga acgacgccca gaaataagca
     4441 aacaacgtat tgttgtctcg cgcgttggta cccattccgt cgaaattgac gctcgcgccg
     4501 ttgaatttat tgtaccagac gtattgcagg ccgatcttgg cgttgaacca cggccatagc
     4561 gcaggcggat tggtcttgcc gaacggcata tatgctatct cggccaccca cccgtcactg
     4621 ttgggactga acgtgcggtt gccgccgtaa aggatcgtgt cggagctccc ccaggtgttg
     4681 aaataaccgc ccgtaaggat gaatttgttg accgacccgc caagcgcaag ttcggcctgg
     4741 gccctgaaag tgttgagcgt gttcgtcgtg tttgccgcca gaccgctcgc aaaactcgcg
     4801 ttgagcaatt gattttcatg aagatacgtt ccccgaagag taaccacaaa cccgtcgccc
     4861 atatattgat attgtgaatc gatcccaata tcgtggaact ggtcgaatcc gctgcttacg
     4921 acccccgccg gagtgacgtt agcagacaga ccgaaagcgc cgatctcaaa ggaatgattt
     4981 ccccaactcg gcgcgaaagc ggcgcggaaa tacggaatgg ccccggtcgt ttgcgggcca
     5041 tcctgcgcga cgacacccag cgagctttga agactcgact ggagcgcccc gtaaccgccg
     5101 ccttcaaggt aaatcatgtc gttgatgaac gcatacgcgg tagcgccgag cacgtgggct
     5161 gcgaacgcgt tatcgatcag cgtcttggcg tcaggcgtgt tggcaagact cgaagccacg
     5221 aacggatagc cccaggccgg agtggtattc cagacgtcct ggactgtcgg attattgttc
     5281 acgctcacgc cgtaaatgac cggcatgccg ccaacctttg tcgtattggc atagcggacg
     5341 tccaggttgt cccacatgaa ctggctggcg ggtggcggac caaattgcgg tcccgcgtag
     5401 gtggcctgca caaacgcacc gacatgctcg gtgatcgcgc cgccgtagaa catgctcccc
     5461 tgttgcagta ccacattgtc gttttggtgg aggagcgatc cggcattatc gatcggcgta
     5521 ttggtatgcg tgaagccgaa gatcgtcatg ccggacaccg gcggcaacca tcctgatgac
     5581 cctagcggct tggtgtcggg ggccgtctga gtatagccca tgagtttgaa ccgccgacca
     5641 gtcggggtca attgtggaaa gctggtgtga catgccccac acgccaagcc ggtttggcgt
     5701 gcgaagctcg gtagcgcgtc ggccttcggc attgtgacga gcattacgac caccgccgca
     5761 agcacccctg cgatggagcg gagggccaat gaaattacaa ctttcagata ttttagacgg
     5821 gcaacatcca aatattcgat accagccatg gttgctccca agcaaaactc gtctccgtac
     5881 ggaacaagcg cgcaccaaac ccttggccgg ccacaatgtg gtcggccccc gcattacctt
     5941 ttgccgtatt atctcaatcg acggcgaggc gatttttgcc aagcccgtgc gatctaccag
     6001 aaactatcgt cgacgtattt agccgctctt gggtcatact gatcttgaca acacgccaaa
     6061 catctgacgt ttcgtgcgtg catcgcctag gagatggaaa accgcatata caaatgacgc
     6121 aagaagccaa acgctagc
//
LOCUS       DATILV010000489         3674 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2417569, whole genome shotgun sequence.
ACCESSION   DATILV010000489 DATILV010000000
VERSION     DATILV010000489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3674
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2417569"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            218..661
                     /locus_tag="VLJ17_11075"
     CDS             218..661
                     /locus_tag="VLJ17_11075"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSV23558.1"
                     /translation="MLNDDLRANPDISVTDELDSADAAVISDGLRAYYLSQTGYYDFR
                     PLAVFVRDPQTGKIIGGLHGRSEFGLVYVAWFFLPEDWRGARIGSRVLAMAEEEGRRR
                     GCTRIALTTLSIEAPGFYQKQGYNVAATIDCEPPGLTRYYMMKRL"
     gene            915..1811
                     /locus_tag="VLJ17_11080"
     CDS             915..1811
                     /locus_tag="VLJ17_11080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HSV23559.1"
                     /translation="MRFDLVDLRLFLFVAEAANITHGAARAGMALASASERIRLMEQS
                     LGAPLLERHRRGVRATPAGATLVSHAQLVIQQLERMRGELSEYADGFRGRVRLFANTT
                     ATAEFLPATLAAFLSQHPQIDIDLEERSSRDIVRAVAGYLAEIGIVGDEVNPAKELQT
                     FPFAEDRLVLIAPRDHVVSHQRAIAFRDALAYDHVGLPAGNALQDQMEDHAARAGRRL
                     KLRVRLPGFDAVCQVVGSGIGVAVVPATAARRCQRSAAIRIIPLVDTWAPRRLTICVR
                     SFAALPPHGQRLVEHLRSRAQA"
     gene            1906..2784
                     /locus_tag="VLJ17_11085"
     CDS             1906..2784
                     /locus_tag="VLJ17_11085"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HSV23560.1"
                     /translation="MCGTAPITTAILLALASMFGFGTGFVLTQFGLRWMLPWLGVAIS
                     IPTSTLLFWCLAPFFVHPSDGNLKAVILFACVGLLFPGAVALLNFESNRLMGPNIAGA
                     LSSMAPVFAILLAIVILGERIRGPQLLALAAIVVGISLMYRVHVNLSVRSLWLMALPV
                     AAAAIRGVIQPIVKFGFEWWPNPIAAVVLSYTVSSAVLIFSALARAGGTIPDIDYRGA
                     LWFAAVGLCNGLSVLAMYAALKYGPVTVISPLIAGYPLVTLLLSRAFLGKEDVSPQLI
                     AGVAGAVCGVVLLLVA"
     regulatory      2903..3053
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            3132..3623
                     /locus_tag="VLJ17_11090"
     CDS             3132..3623
                     /locus_tag="VLJ17_11090"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HSV23561.1"
                     /translation="MNQPQNPATAENRNARRIAFVQACWHKDIVDRCRVSFTAEIAKH
                     GFGDGGIDFFEVPGSLEIPLHALLLAESGRYAAIVAAGFVVNGGIYRHEFVAEAVISG
                     LMRVQLDTKVPVISAVLTPQNFHEHDEHKKFFYDHFVVKGAEAAVACAATVNKVARLL
                     SSS"
BASE COUNT          647 a         1093 c         1130 g          804 t
ORIGIN      
        1 cttggcaccg ctttcaatcg tcggagggcg tgaccttgat ggccgcaaca cccttcccca
       61 gcgaggtcat cgagctcgat gtcgacgacc cgcgtaccgt gccgcgtaag cccgcgtgag
      121 caacggcata acggtcgaat agagttatcc gcaacgaaaa agaccaacgc ggccgaggca
      181 agccccggcc accgcgccag cgcgatggga ggcgaatttg ctgaatgacg atctcagggc
      241 aaacccagac atttccgtca ccgatgagtt ggattccgct gacgcagcgg tgattagcga
      301 tggtctgcgc gcctattatt tgagccagac tggatactac gactttcgcc cgctcgccgt
      361 gttcgtccgt gatccacaga ccggcaagat catcggcggg ctccacggac ggtccgaatt
      421 cgggctcgtc tatgtcgcct ggttctttct gccagaagat tggcgcggcg cacggattgg
      481 cagccgcgta ttggcgatgg cagaagagga aggcagacga cgcggctgca cccggatcgc
      541 gttgacgacg ctcagtattg aggcgccagg cttctaccag aaacagggct acaatgtcgc
      601 ggcgacgatc gactgcgagc cgcccggcct cacgcgctat tacatgatga agaggctctg
      661 aggcaccttg tccgttacgg gaggcgtgag aggggcgctt tgcgatcgaa cgccaaatgg
      721 caactgtggg gcaacagtac acgttcgcat caacgcggct taatcgctca atagcgccga
      781 tatgcgtcat tcatcagcgc cgcgcaatcg acctgatccg acggttccag aaaggcggtg
      841 cacctgttcg cgtgtgggcg gtgctacgat gcctcaggca aagccgaagg cgcgagctcc
      901 tcatgaaaac gtccatgcgc tttgatttgg tcgatctgcg tctgttcctg tttgtggccg
      961 aggcggcaaa tatcacgcac ggcgccgcgc gggcgggtat ggcgctggca tcggccagcg
     1021 aacgaattcg gctgatggaa cagagcctcg gggcaccgct cctcgaacgc catcgccggg
     1081 gcgttcgtgc gaccccagct ggcgctaccc tcgtcagtca cgctcaactg gtgatacagc
     1141 agttggaacg gatgcgcgga gaattgtcgg agtatgccga cggcttcaga gggcgcgtgc
     1201 gcctgttcgc caatacaacc gcgacagccg agttccttcc cgctaccttg gccgcattct
     1261 tgtcgcagca tccccagatc gacatcgatc tggaggagcg ttccagccgc gacatcgtgc
     1321 gcgctgtcgc gggatacctc gccgagatcg gcatcgtcgg ggacgaggtc aatccggcca
     1381 aagaactgca aacctttccg tttgcggaag accggctcgt gctgatcgcg ccgcgcgatc
     1441 atgtggtgag ccatcaacgc gcgatcgcgt ttcgcgatgc ccttgcttat gaccatgttg
     1501 gcctccctgc tggcaatgcc ctccaggatc agatggaaga ccacgcggcc cgcgcgggcc
     1561 gtcgtttgaa attgcgtgtc cgccttcccg gtttcgatgc cgtttgccaa gtggttggta
     1621 gcggaattgg tgtggctgta gttccggcaa cggcagcccg ccggtgccaa cggtccgcgg
     1681 cgatccggat catcccgctc gtcgatacct gggcgccgcg tcgtctgaca atctgcgttc
     1741 gcagcttcgc agcgttgcct ccccatggac aaagactcgt tgagcacctc cggtcacggg
     1801 cacaggcgta atcagctgtc ttagctttta ccgaagtcag cgttcgctac ttccgcattg
     1861 tccgaaatcg cacggccaac gatcttcgat cgtcgatcga gactcttgtg cgggacagca
     1921 cccatcacga cagcgattct tctcgccctc gcgtcgatgt tcgggttcgg cactggcttc
     1981 gtgctcaccc agttcgggtt gcgttggatg ctgccctggc tgggcgtggc gatcagcatt
     2041 cctacgtcga cgctgctctt ctggtgtctt gctccatttt ttgtgcaccc cagcgatggc
     2101 aatctgaagg ccgttatttt gtttgcgtgt gttggattgt tgttccccgg agcggtcgcg
     2161 ctgctgaatt tcgaatctaa tcgtttaatg ggcccaaata tagcgggcgc gctcagcagc
     2221 atggcgccgg tttttgcgat cctcctcgcg atcgtcatcc tgggtgagcg gattcgtggt
     2281 cctcagctac tcgccttagc cgcgatcgtt gttggcatca gtttgatgta ccgcgtccac
     2341 gtcaacttgt ccgtccgctc gctctggttg atggcactgc ccgtggccgc ggccgccatt
     2401 cgtggcgtga tccagccgat cgtcaaattc ggttttgaat ggtggccgaa cccgatagct
     2461 gctgtcgttc tcagctatac ggtttcctcg gccgtgctca tcttctcggc gcttgcgcgc
     2521 gccggcggga cgatccccga tattgattac cgcggcgcgc tctggtttgc cgcggtcggc
     2581 ctatgcaacg gtctttctgt cctggcgatg tacgctgccc tcaaatatgg gccggttacg
     2641 gtgatctcac cgctcatcgc cggctaccct ttggtgacct tgctgctgag ccgcgcgttc
     2701 ctcgggaagg aagatgtgag tccccagctg atcgccggcg tcgctggcgc ggtctgcggc
     2761 gtcgtgttgc tgctcgtggc gtaggggcag cgctgtgttc tcggtttgac ttgatctcgg
     2821 caagctgacc gttcggttgg cgaaaatggt tgtatggctt gaccaaacta gctttaatcg
     2881 caccggtcgg atttcggtcc gaccgcgttc tcggggcggg gtgaaagtcc ccaccggcgg
     2941 taatggcgag cgatcgccaa agcccgcgag cgcccgccga gcaatcggcg gggtcagcag
     3001 attcggtgcg attccgaagc cgacggttac agtccggatg gaagagaacg ggaagatttg
     3061 gcgcacgcat ggcgtgtcgt cctttgaggc ccgggcgccc tgattctggt ctcttaggag
     3121 gaggaacagc catgaatcag cctcagaacc cagccactgc cgaaaatcga aacgcgcgac
     3181 ggatcgcctt tgtgcaagcc tgctggcaca aggacatcgt cgatcgatgc cgcgtgtcgt
     3241 tcactgccga aatcgctaag cacggcttcg gcgacggcgg cattgacttc tttgaggtgc
     3301 cgggatcgtt ggaaattccg ctacacgcgc tattgctcgc tgagagcggg cgctatgccg
     3361 ccatcgttgc cgccgggttt gtcgtcaatg gtggcattta ccggcacgag ttcgtcgctg
     3421 aagccgtgat cagcgggctg atgcgcgttc agctggacac caaagtgccg gtcatatcgg
     3481 ccgtcctgac gccacagaac ttccatgagc atgatgagca caagaagttc ttttacgacc
     3541 atttcgtcgt taagggcgcc gaggcggcgg ttgcttgcgc tgcaacggtc aacaaggtcg
     3601 ctcgcctact atcgtcgtcg tgagcgcata acggccgtag aatgggtagg ccacaggttc
     3661 ctgctgatgg catg
//
LOCUS       DATILV010000490         4432 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_886265, whole genome shotgun sequence.
ACCESSION   DATILV010000490 DATILV010000000
VERSION     DATILV010000490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4432)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4432)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4432
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_886265"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..683)
                     /locus_tag="VLJ17_11095"
     CDS             complement(<1..683)
                     /locus_tag="VLJ17_11095"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HSV23562.1"
                     /translation="MTTSRDNAAGITTCESWLDGICEKDNCFKFDLQVTVNRVSFAQV
                     EGQLAMKANTRSERLRADVLSVLRDSVQDRIFPGAVAALISSTDEIYIPFGCETYDPI
                     ARPISDESIFDVASLTKIVATTTAIIQLVERKQLALHDRACNVVPQLRQAPKDQITIL
                     QLLAHTAGFPGGEPLSGRYKSRDEILEAICSINLLYLPGTSRTYDDLGYILLGIIVES
                     ITGLTLDKY"
     gene            complement(1217..2056)
                     /locus_tag="VLJ17_11100"
     CDS             complement(1217..2056)
                     /locus_tag="VLJ17_11100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23563.1"
                     /translation="MSWCSWREVALAGSTVAALVGVLAEAAVAQEKITTPLFSWDLAV
                     GWIGVGGFQPVPGRVPPLTQDPKYPFVPNGTGRQPTYRIADLNNPNLRPWVKEIMKKD
                     NDEVLRGKIAFSPSSSCKPSGVPAFLGLGGNNNPYWFLQTPKEVVIMRAADSQVRHVY
                     LDVPHSPNPKPSWYGESIGHYEGDTLVIDTIGLNAKTFVDYYRTPHTEKLHVVERWRM
                     VNDRQAMEVTFTVDDPDTYYEPWSGMRRYRRVQQQFMEDICAENNQHLFDYEIPIARN
                     PDF"
     gene            complement(2354..2758)
                     /locus_tag="VLJ17_11105"
     CDS             complement(2354..2758)
                     /locus_tag="VLJ17_11105"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSV23564.1"
                     /translation="MPWLSNKTPEIVASWIASPNNSLLVAVERGAILGVGSISNAGEV
                     LLNYVSPDVRFRGVSRALLGALEARAIERGNVWCTLISTETARRFYQADGYVEDGLLA
                     GKFDKRASYPMSKSLLAVQNCAHRLMATTCSD"
     gene            complement(3028..3894)
                     /locus_tag="VLJ17_11110"
     CDS             complement(3028..3894)
                     /locus_tag="VLJ17_11110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23565.1"
                     /translation="MMYRGSTGAFAMATALLATIGVAQAADDAKYPNWKGQWERFVTP
                     GIPGQSSAGYDQTKPWGLGQQAPLTPEYQAVLEASIADLAIGGLGNFPTTLGRAAGMP
                     NMMMGFGPMEFVVTPDTTYILIGWHDHYRRIFTDGRDWPTDIEPTYSGYSIGRWIDED
                     GDGRYDVLEVETRGFKGPRAYEETGLPLHIDNQSIFKERIYRDKADPNILHDEITSID
                     HALTRPWTVDKRYVHNPDPRPNWVEFYNTENNAQIAIGKENYFLSGDGLLMPAKKNQA
                     PPDLRYFKQTRK"
     gene            complement(4082..>4432)
                     /locus_tag="VLJ17_11115"
     CDS             complement(4082..>4432)
                     /locus_tag="VLJ17_11115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23566.1"
                     /translation="ESSFLSEVDDTSILRTVLSTCYWHALDWLPASRLRPRAAGWSAA
                     TSCFGPLQPPSSPVVVAGYWGTPVASVTRPTVDSCDSRTGVSNVSLASAIEAGSAAAV
                     AKLGGGLTAAPAEC"
BASE COUNT          931 a         1303 c         1234 g          964 t
ORIGIN      
        1 cagtatttat ccaatgtgag acccgttatg gattccacaa taatgcccaa gagaatgtac
       61 cccaaatcat cgtaggtacg gctagtgcct ggtaggtaca gaagatttat tgaacaaatt
      121 gcttccaaaa tctcgtcgcg agatttgtag cgcccggaaa gcggctcccc gccggggaac
      181 ccggccgtat gtgcgagcaa ttgaaggata gttatttggt ccttaggtgc ctgtctcagc
      241 tgcggaacaa cattgcacgc tcggtcgtgt aaagcgagtt gctttcgctc caccaattgt
      301 atgatagctg tagtcgttgc tacgattttg gtcagcgacg caacatcaaa gatcgactcg
      361 tccgaaatgg ggcgagcaat tggatcgtac gtctcacatc cgaatggaat atatatctcg
      421 tctgtgctcg atataagcgc agccactgcg ccaggaaata ttctgtcctg aacggagtcc
      481 cgcaggactg aaagtacgtc cgcccttaac ctttccgatc tcgtgttcgc tttcatcgcc
      541 aattggccct caacttgcgc aaatgacact ctatttacgg taacctgcag gtcaaactta
      601 aaacagttgt ccttttcaca aattccatcc agccaggatt cgcatgtggt gatccctgct
      661 gcattgtccc ggctcgtcgt caacacaaga ccgccaaggt gatcgggctc attcggataa
      721 cgtcgtctac ttgccagaca gcgatcagcc aaacgatgat cgtcgcacgc gtgcggtttc
      781 ggcggcgtcg aaagccgacc aaggccttcc cgaacaaggg ttcgtcttct gttcgtttaa
      841 aacccgtaca aaattactcc catgatcttt gacatctggg tgcggctgct tcatcaggtc
      901 gacggcgtac tctggctgct gcaaggcaat gaggtcgcac gtcacaacct tggcccagaa
      961 gccgagaaac gcggcgtgcc cgcgaaccgc ttggttttcg cgaaacgtac ggcgttcgaa
     1021 aaatcacctt gccggggcgg ccccaccgtt tcggctatcg cttacgttga cgagttttct
     1081 tgcgcgccgc cactggaacg gccgggctgc tagcggccct gcggcccgta cgcaaccgca
     1141 gccccggcga accgtcgttt agaaactcga tcccggcgct cgacggtttc aatacgaagt
     1201 tcactgtcgc ggcatgtcag aaatccggat tgcgagcgat cgggatttca taatcaaaca
     1261 gatgctggtt gttctcggcg cagatatcct ccatgaactg ctgctgcacg cgccgataac
     1321 gccgcattcc agaccagggc tcgtaatagg tgtccggatc atcgaccgtg aaagtcacct
     1381 ccatggcctg gcggtcgttg accattcgcc agcgctcgac gacgtgcagt ttctcggtgt
     1441 gcggcgtacg gtaatagtcc acgaaggtct tggcgttgag cccgatggtg tcgatcacca
     1501 acgtgtcgcc ttcgtagtgg ccgatcgact cgccatacca ggacggcttc ggattgggcg
     1561 aatggggtac atcgagatag acgtgacgca cctgcgaatc ggccgcccgc atgataacga
     1621 cctctttggg agtttggagg aaccagtaag ggttgttatt cccacccaaa cccagaaaag
     1681 ccgggacgcc ggacggcttg cagctcgagc tcggcgagaa ggcaattttt ccgcggagca
     1741 cttcgtcgtt gtccttcttc ataatctcct tcacccacgg cctcaggttc ggattgttca
     1801 ggtcggcaat ccgataggtt ggctgacggc cggtgccgtt gggaacgaag ggatatttgg
     1861 gatcctgggt gagcggcgga acgcggcctg gaacaggttg gaaaccgccc accccgatcc
     1921 atccgacagc gagatcccag gagaaaaggg gcgtggttat tttctcttgc gcgaccgcag
     1981 cttcggccaa cactcccacg agagcggcca cggtgctgcc tgcgagtgca acttccctcc
     2041 aactgcacca ggacattgtt gttcctcctc ctgaggtgcc ttttctgcaa cgcgagcaag
     2101 acgacttggc accgggccgt attgtacatc gaattcaatg caggtgagca gccccgatcg
     2161 gaggtgctgg cgcgcatgac tggtttgggt catcagccgc cgagcgcctg gaccagccgc
     2221 gtggccgcag tgcattcagc accggacatc acgacacgac atcattgatc cgcgctctcg
     2281 aagcagaagt caggaatttt gccgtcatca attggaacag gtggtcgcca tcaatcgaaa
     2341 cgactggtcg acttcaatcg gaacaggtgg tcgccatcaa tcggtgcgca caattttgca
     2401 ccgctaatag cgacttcgac attgggtagc tcgcacgttt gtcgaatttg ccggccagga
     2461 gtccgtcttc aacgtagccg tcggcttggt aaaagcgacg ggccgtctca gtgctaatga
     2521 gcgtgcacca cacattgcct cgttcgatcg ccctggcttc gagcgcgcca agcaatgccc
     2581 gactaacacc gcgaaacctt acgtccggcg agacgtagtt cagaaggacc tctcccgcgt
     2641 tgctgatgga acccacccca aggatcgcgc cgcgctcaac ggctacgagc agagaattgt
     2701 taggtgacgc tatccacgag gcgacgattt cgggagtttt gttgctcagc catggcatca
     2761 aaatcgtcgg atcgttccta tgacccgcga cgcagagctc cgatatcgac cgccttagcg
     2821 cttggcaggc agcaggcgcg tctttagcca cagcatctct gatttccatt ccggcacagt
     2881 gctatcaggc ctgtccagcg gcaaggcgct tcatctcgct cagaccgctc ggtctccgac
     2941 gaaatgatga agtagctggc atgttcgtcg gaacgatcgg gaagccgcct tttgaattat
     3001 ctcaatgcgc ttctgccaac gctgtcgtca cttccgggtc tgcttgaaat atcgcagatc
     3061 gggcggtgcc tggttcttct ttgcgggcat caaaagccca tccccgctca ggaaatagtt
     3121 ttccttgccg atggcgatct gtgcgttgtt ttcggtatta taaaactcta cccagttcgg
     3181 acgcggatcc gggttgtgta cataacgttt gtcgacagtc cagggccgag tcaaagcatg
     3241 gtcgatcgat gtgatttcgt catgaaggat gttcggatcg gccttgtcgc ggtagatgcg
     3301 ctccttgaaa atagactgat tgtcgatgtg caggggcagg ccggtttcct cgtaggcacg
     3361 gggccccttg aagccccgcg tctcgacctc gagcacgtcg tagcggccat cgccgtcctc
     3421 gtcgatccat ctgccgatcg agtaacccga ataggtcggt tcaatgtccg tcggccagtc
     3481 gcgtccgtcg gtgaagattc gacgatagtg gtcatgccag ccgatcaaga tataggtggt
     3541 atccggcgtg accacgaatt ccatcggtcc aaatcccatc atcatattcg gcatgccggc
     3601 ggcgcggccc aaggtggtgg ggaaattgcc cagtccgcca atcgccagat cagcaatgct
     3661 tgcctccaac actgcctgat actcaggcgt cagcggcgct tgttgaccca atccccaagg
     3721 cttggtctgg tcgtaacccg ctgacgactg gccgggaatc ccaggagtga cgaaccgctc
     3781 ccattggccc ttccaattgg ggtatttcgc gtcatcggcg gcctgcgcga cgccgattgt
     3841 cgccaacagc gccgtggcca ttgcaaacgc cccagtcgag cctcgataca tcatgatcat
     3901 gctccctaca ttatgatcat gctccataca ttgtcggatc acttgcttga tcgctgcgga
     3961 cgcgacattg acgcagcagt gaacaggata caccgcctgc accgcacatg gaacggcgct
     4021 acgaaccgag cgcgcaggcc cggaatccgc aattctccgc gggatattcg atttcgtccg
     4081 atcagcactc agccggggct gctgtgaggc cgccaccgag cttcgcgacc gccgcggcag
     4141 aacctgcttc gatagctgac gccagcgaaa cattgctgac gcccgtccgg ctgtcgcagc
     4201 tatcgacggt cggtcgcgtc acgctggcga cgggtgttcc ccagtaaccg gccaccacga
     4261 caggcgacga tggtggctgc aacgggccaa agcacgaagt cgctgcgctc cagcccgctg
     4321 cgcgggggcg tagccgagag gccggtagcc agtcgagagc atgccaatag caagtggaga
     4381 gcaccgtcct gagaatcgag gtgtcgtcaa cctcactcag gaaggagctc tc
//
LOCUS       DATILV010000491         3126 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3437442, whole genome shotgun sequence.
ACCESSION   DATILV010000491 DATILV010000000
VERSION     DATILV010000491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3126
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3437442"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..416)
                     /locus_tag="VLJ17_11120"
     CDS             complement(<1..416)
                     /locus_tag="VLJ17_11120"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018237364.1"
                     /note="catalyzes the formation of acetyl phosphate from
                     acetyl-CoA and phosphate; can also act with other
                     short-chain acyl-CoAs; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HSV23567.1"
                     /translation="MLNEKDSEIIAIAPVGPVGVRPQSKYDRLIAKAKEVPAAKTVVV
                     YPCDETSLRGPIEAAEAGIIVPILVGPAAKIAAVARGLRLNIDRFEIVDVPDSEAAAA
                     KAVELIHESKGELLMKGSLHTDELMREVTAGKTGLRT"
     gene            complement(604..792)
                     /locus_tag="VLJ17_11125"
     CDS             complement(604..792)
                     /locus_tag="VLJ17_11125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018646393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23568.1"
                     /translation="MAEITKLSVGKALEKLRTNDVPTSKTARLDEKSKALDEELQRLR
                     AATRGLRQGQQGGSKGRD"
     gene            complement(804..3014)
                     /locus_tag="VLJ17_11130"
     CDS             complement(804..3014)
                     /locus_tag="VLJ17_11130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018237365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3141 domain-containing protein"
                     /protein_id="HSV23569.1"
                     /translation="MGAFAGPLGMFTPVMDYMIDAAQRGVLFCDVMRQRGNQYRERLA
                     ETVPHVLDYEVELVVDGRTLDRPVNYALARVIPPAGIEFDPKRRPFVVVDPRAGHGPG
                     IGGFKADSEIGVAFKAGHPCYFIGFLPEPMPGQTIEDIARAEAVFLEKVIALHPEADG
                     KPCVIGNCQAGWAVMMLAAIRPELFGPIIVAGSPLSYWAGVRGKFPMRYSGGLLGGSW
                     LTALTGDLGHGKFDGAWLVQNFENQNPANTLWSKPYNLYSKIDTEAPRYLGFEKWWGG
                     HVNLNAEEIQFIVDELFIGNNLAAGRIQTSNGTSIDLRNIRSPIVVFCSKGDNITPPQ
                     QALGWILDLYENVDEIRSCGQTIVYTIHETIGHLGIFVSGGVAKKEHGEFSSNIDLID
                     TLPPGLYEAVLENKAGDTANPDLVTGNWVMRCEARTLDDIRALGGNDAADERRFATAA
                     RVSEINLSLYRTFAQPMVRAMVNSPMAEWMQQLHPLRLQYEFFSNANPLMAPVATLAE
                     QVRKDRKPSEANNPFVAMQENASRQIVAGLDAWRDMTEALAERTFLTIYGLPSLQAAV
                     GLDPAATRPLRQAAKSPLHQELLQKRIAELKSRIPIGGLREAVIRGLLYAGMTRAAID
                     ERGFELTRRIRQAHGDIPLSDFKALVREQFNMLLIDQEGALRAIPTMLPSDAEERRKA
                     FDLIKQVLGARGEMSPEDEKRMSEVARLFDVDDKRSGDQIPFRRTRKELQNRAS"
BASE COUNT          621 a          937 c          882 g          686 t
ORIGIN      
        1 gtgcgcaggc cggtcttgcc ggcggtcacc tcacgcatga gctcgtccgt gtgcaggcta
       61 cccttcatca ggagctcgcc cttggactca tggatgagct caactgcctt cgcggccgcc
      121 gcctcgctgt ccggtacgtc gacaatctca aaacgatcga tgttcaagcg aagcccgcgc
      181 gctacggcgg caatcttcgc cgccgggccg acaagaattg ggacgatgat gccagcttcg
      241 gccgcttcga tgggaccgcg cagggacgtc tcatcgcatg ggtaaacgac gaccgttttc
      301 gctgccggca cctccttcgc tttggcgatc aaacggtcgt atttcgattg gggacgtacc
      361 ccaacaggtc cgacgggtgc gatcgcaatg atttcactat ctttctcgtt cagcatgatc
      421 atttctccaa tacagccgaa ttcgcgtgcc aacggttcta cgatgttctg gcttagattt
      481 cctctcggtt cggcgaaacg gaatcttgat cagatcgaat gccttgtgcc gtatctccgc
      541 atcggacaga agccgagggg attgcgcgca gctccgcttc ttggtcgatc ggcaacatat
      601 aactcaatcg cgcccctttg agccgccttg ttggccctga cgaaggccac gggttgctgc
      661 cctcaagcgc tgcagctctt cgtcaagcgc cttacttttc tcgtcgagtc gggcagtctt
      721 cgacgtcggc acatcattag tgcgcagctt ctcgagcgct ttgccgacgg agagcttagt
      781 aatttcagcc atggtagcct cctttatgat gctctgttct gaagttcctt tcgagttcga
      841 cgaaagggaa tctgatctcc gcttcgttta tcatccacat cgaagagccg ggcaacctca
      901 ctcattctct tttcgtcctc tggagacatc tcgccgcgtg cgcctaagac ctgcttgatc
      961 agatcaaatg ccttgcgtct ctcctcagca tcagatggaa gcatcgtggg gattgcacgc
     1021 agagcgcctt cttggtcgat caacaacata ttgaattgct cgcgcaccag cgccttgaaa
     1081 tccgaaagag gtatatctcc gtgtgcctgg cgaatgcggc gagtaagctc aaatccccgc
     1141 tcatcaatgg ccgcccgcgt catgcccgca tatagaagtc cgcggatgac ggcttcgcgc
     1201 agcccgccaa tcggaatccg cgacttaagc tccgcaatcc gtttctgaag gagctcctgg
     1261 tggagcgggc tcttggctgc ctgccgcaac gggcgcgttg cggcagggtc gaggccgacg
     1321 gcagcctgca gtgacggcaa gccgtagatg gtcaggaacg tccgctcagc gagcgcctcg
     1381 gtcatatccc gccacgcgtc gagccctgcc acaatttgcc gagatgcgtt ttcctgcatg
     1441 gcgacaaacg gattgttcgc ctccgagggc tttcgatcct tccggacttg ctcggccagg
     1501 gtggccaccg gagccatcaa tggattcgcg ttggagaaga actcgtattg caaccgcaga
     1561 gggtgcagct gttgcatcca ctcggccatg ggagagttga ccattgcgcg aaccatgggt
     1621 tgcgcaaatg tccggtaaag ggacagattg atctcggaga cgcgggcggc agtcgcgaac
     1681 cggcgctcat cggccgcgtc gttgccaccg agcgctctga tgtcatcgag ggtccttgcc
     1741 tcgcatcgca tcacccagtt tccggtgacg agatcggggt tggccgtatc accggcctta
     1801 ttttcaagca ccgcctcgta gaggccaggc ggaagggtgt cgatcagatc aatattgctt
     1861 gagaactcgc cgtgctcctt ctttgcaacg cccccggaaa cgaagatgcc caggtgccca
     1921 atcgtctcat ggatggtgta gacaatcgtc tgcccgcatg agcggatttc gtcgacgttc
     1981 tcgtacagat cgagaatcca tccgagcgct tgctggggtg gcgtgatgtt gtcgcccttc
     2041 gagcagaaca ccacgatggg agaacggata ttgcgcaagt cgatcgaggt gccgttcgat
     2101 gtttgaatcc tgccggcagc gagattgttt ccgatgaaca gctcatcgac gatgaactga
     2161 atctcctccg cgttcagatt gacgtggccg ccccaccact tttcgaagcc cagatagcgt
     2221 ggcgcttccg tgtcgatctt ggaatagaga ttgtacggct tgctccagag cgtattggcg
     2281 ggattctggt tctcgaaatt ctgcaccagc catgcgccat cgaattttcc gtgaccgagg
     2341 tcgcccgtca aagcagtcag ccagctgccg cccaacaaac cgccgctgta gcgcatcgga
     2401 aatttgccgc gcacgccggc ccaatatgag agtggagatc cggcgacgat gatgggacca
     2461 aacaattctg ggcggatagc ggccagcatc atcactgccc agccggcttg gcagttgcca
     2521 atcacacatg gtttaccgtc ggcttcagga tgcagagcaa tgaccttttc gaggaatacc
     2581 gcctcggccc gcgcgatatc ctcgatcgtt tggcccggca tgggctctgg caaaaatccg
     2641 atgaaataac agggatggcc ggccttgaag gcaacgccga tttcgctgtc cgccttgaag
     2701 ccgccgatgc ccggaccgtg cccggcgcgg gggtcaacaa cgacgaatgg cctgcgtttc
     2761 gggtcaaatt caatgcctgc aggcggaatg acccttgcca gcgcataatt gaccggccga
     2821 tcgagcgtcc ggccatcgac gacgagttcc acctcatagt cgagcacgtg cggaaccgtc
     2881 tcggccaaac gctcgcgata ttggttgccg cgctgccgca taacatcgca gaaaagtacg
     2941 cctcgctggg ctgcgtcgat catgtaatcc atcacggggg tgaacatgcc taagggtcct
     3001 gcaaatgcgc ccattgcaga cgtgtctctt tgatcggatg gcatctttct ctcctgcatg
     3061 aaacgtcccc acgaacagct gtgcactgct tgatcgcaag gcaaggggcg atccgcgtcg
     3121 caccaa
//
LOCUS       DATILV010000492         9378 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3437511, whole genome shotgun sequence.
ACCESSION   DATILV010000492 DATILV010000000
VERSION     DATILV010000492.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9378)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9378)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9378
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3437511"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..767
                     /locus_tag="VLJ17_11135"
     CDS             <1..767
                     /locus_tag="VLJ17_11135"
                     /inference="COORDINATES: protein motif:HMM:NF012260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="beta/gamma crystallin-related protein"
                     /protein_id="HSV23570.1"
                     /translation="SPAILRLNPNFVQRSGIAPEGPATLKPGPGQSLVNPALLKPGPV
                     GSQQTRPAFPAVSLHNKFWPIHKDHKSMFIGGHRRLFIPVGLLGVALIGGSYWYPNGY
                     VSMEGPACTGYTADGCQLQWRMVDFEDGGGEPQCVQYCPQVGPAPALAQAATLPPPPP
                     LAENGACQATIYAEPNFGGNSAPTGDSQPNLSQTGWRNEISSLVVGAGTWEFFTDENF
                     GGESMRLPPGTYPTLSAEWTRQIGSFMCVQPGPPPA"
     gene            1079..1327
                     /locus_tag="VLJ17_11140"
     CDS             1079..1327
                     /locus_tag="VLJ17_11140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HSV23571.1"
                     /translation="MTERIVPHFHNDAGVAVIEIGAKEFMCVGALPPFDHPHIFLDMG
                     GDSEIICGYCSTLYRFDPALAPNAARPPECALAETETA"
     gene            1349..2296
                     /locus_tag="VLJ17_11145"
     CDS             1349..2296
                     /locus_tag="VLJ17_11145"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HSV23572.1"
                     /translation="MTADGVLIAGAGIGGLTAALALARHGIKVTLLDQAEELAEAGAG
                     IQPSPSATGILVALGLAERLKPSIVQPSAIRHGSARRAETDCNGAALIGADGLWSRLR
                     ALLGDSTAPRFASRTAFRAIVSATQLSPQDREPVVNLWIGPDGHLVHYAVRAGTAVNI
                     VAVAGDRWQSAAWSTGAERDELIERFPAPAWAPAARELLAVPERWQKWALCDRIPTTL
                     WGCGPVTLLGDAAHTLPGSGRHDGDRGRRRSGARARPLTRRSQHCPAQLRNHTPAAHS
                     PRAICRTPPRYSLSSAAAGCFCARRHAAGAWRRAAAHTI"
     gene            2480..3499
                     /locus_tag="VLJ17_11150"
     CDS             2480..3499
                     /locus_tag="VLJ17_11150"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003871 -
                     5-methyltetrahydropteroyltriglutamate-homocysteine
                     S-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HSV23573.1"
                     /translation="MFPTTIAGSLPKPSWLAEPGKLWAPWRLTGAELKTAKLDATLLA
                     IKLQEHAGIDIVTDGEQSRQHFVHGFLESVIGIDFAKRVEMGIRNDRYKAMVPTVTGP
                     LSLKDRVHATEARFARAHTDKKLKLTLPGPMTIVDTIADGYYGDRIKMAFAFADVLNQ
                     EARALAADGVDVIQFDEPAFNVYMDEVVEWGIAALHRAAAGLTCTTAVHICYGYGIPA
                     NVEWKASLGAAWRQYEQIFPVLAKSELQQISLECRNSKVPLELLRLLDGKDVLLGVID
                     VATAFVETPEEVATVIGETLRYVPRERIIPCTNCGMAPMHRDIAAAKLMALGVGTKLA
                     RERFG"
     gene            3645..5303
                     /locus_tag="VLJ17_11155"
     CDS             3645..5303
                     /locus_tag="VLJ17_11155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HSV23574.1"
                     /translation="MWNQVYDPFGNTTLSTLAAALPVVTLLVLIASNKVKAHIAAIIA
                     LVVANLVAIVIFTMPAGMSLRATVLGAVTGFFPIGWIVLNVIFLYQLTKEKGAFEVLQ
                     TTIGGVSADRRLQLLLIAFSFGAFFEGASGFGTPVAVTGAILIGLGFSPLAASGLSLI
                     ANTAPVAYGALGTPIAGLASVTGIDPFLLGAMVGRQLPFFSLIVPFWLIWAFAGWRGM
                     MQIWPATLVCGVSFAIPQFVISNYINPWIVDIGASLISMACLIGFLQVWQPKELWLSP
                     KLRSRDDSAAAMPAPTAAATVKPTSGEVWLGLLPWIIVCAILLLWGTDWFKAHVNPWA
                     IWTYQVPDLHNMINKVAPVVSTPTKESAAFAFTWLSYTGSGMLIAAIISGFVMGFSPA
                     KIVMVYGRTIKICAYSLITISAMLAIGTLTRLSGIDATLGLAFAGAGVLYPFFGTLLG
                     WLGVALTGSDTASNILFGNLQKITSEQLGLSPILMGAANSSGGVMGKMIDAQSIVVAS
                     TATNWFGHEGTILRFVFGHSIALACLVGLLVMLQAYVFTGMIVH"
     gene            complement(5843..6169)
                     /locus_tag="VLJ17_11160"
     CDS             complement(5843..6169)
                     /locus_tag="VLJ17_11160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAAR domain-containing protein"
                     /protein_id="HSV23575.1"
                     /translation="MQTMGLVFAIPVILCGGVVAAQPAGVVTQGSPDTMIGGKPAARV
                     GDGTTHGAPVVEGSPNVFINGRPAAIAGGRSGCGGAVVAGSSNVFINGKPAAQAGSQT
                     TDCKGR"
     gene            complement(6198..7823)
                     /locus_tag="VLJ17_11165"
     CDS             complement(6198..7823)
                     /locus_tag="VLJ17_11165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="caspase domain-containing protein"
                     /protein_id="HSV23576.1"
                     /translation="MERWIGVRASLCLAALIAVAGFTPVAAQDRVALVVGNSKYVRTN
                     SLPNAGNDARAMARTLREIGFTVAEGVDLDRNGMERQIREFLRRTASASVALLFYAGH
                     GMQVDGRNYLIPVDTRLESPSDLNFETIALDNILENLNDALRANIIILDACRNNPFAQ
                     TYASRMAATRSVTVLPGLAGYSNLGTGTLIAFSTAPNAVALDGTSSNSPFTRALAKHM
                     RTPGLEVRQMLTRVRADVAAETQGRQIPWDNSSLLGEVYLAGFGKPGLQHVDVTPAAP
                     VAADEILWGAIKDSGVAAVFEEFASKYPTSRHAHEARGRADELKKSQLAMLPPASGAQ
                     IGKLMTAPTNAPIASFIRHNGGWSVAFSFAEPVTGISWRLGEVGSFRESGFLDAFDPR
                     TRRRMPNPSIQLDADQPATTVYVRYVDTNGGLQGPFPIRFDPVATLEREQRKILEMTA
                     GNWLSFREFNGLLLYYTHLMSYRCAIRQIRIGLDSTIPDRTIALPPCNQKDPMAIPAD
                     AQPYMKVPSTTGSVSVEITYRDGSVSEVKTFRR"
     gene            complement(7985..9010)
                     /locus_tag="VLJ17_11170"
     CDS             complement(7985..9010)
                     /locus_tag="VLJ17_11170"
                     /inference="COORDINATES: protein motif:HMM:NF024829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HSV23577.1"
                     /translation="MRRLKVRPTLHALPNEPRSNRLRVIRWVYFSCLFALAAWLGDLF
                     LGSLFYLRSEGLVLGEPAVIAAEFPVTVRDLLVHEGERVKSGSVAVVVTSQTVAESIA
                     RLTADLAAREARLSELRIRGEKAEAIIKLAEMRQEVTTGARAEMEKLLKSGLLSLDKR
                     TAAVESEFRSLQDLEALKAEKRVVDAEINELQAASLEAQAAVRDLRHLYDDGKMRVPI
                     DGIVSHLRADKGAVVRAGEPLIEIAGEPPFVLAYLPTGGLYDVAIGDHVQIKSGLRSA
                     GGIIVRVEPFAAALPREFQRAFTPVERQQVLRVEFSPGETPPLLFTKVQLRSNDIVPR
                     FISRLWR"
     gene            complement(9010..>9378)
                     /locus_tag="VLJ17_11175"
     CDS             complement(9010..>9378)
                     /locus_tag="VLJ17_11175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23578.1"
                     /translation="STFRMLEVWAVVDVIFYQAVLALAFPVYLVWLFYYFADFAWTVI
                     AATLIAYFLADILAFAFAAIGGLTHPLRLLPYIPFYTLMQMTLMRGVRLIAIVQEVVF
                     RSSDRDPFVPSRVLRQIEHM"
BASE COUNT         1812 a         2966 c         2818 g         1782 t
ORIGIN      
        1 acagtccggc tatcttgaga ttgaatccaa atttcgtgca gaggagcgga attgcgccgg
       61 aaggtcctgc cacgctcaag cccggccccg gtcaatctct tgtcaacccg gcgctattga
      121 aacccggccc agtcggctcc cagcagacca ggcctgcctt tccggccgta agtctgcaca
      181 acaaattctg gcctattcac aaagatcaca agtctatgtt tattggcggc caccggagac
      241 tctttattcc agtcggccta ctaggcgtcg cgctgatcgg cggttcttat tggtatccga
      301 acggctacgt ctcgatggag gggccggcgt gtaccgggta tacagccgac ggctgccagc
      361 tgcagtggcg catggtcgat ttcgaggacg gcggcggcga gccgcagtgc gtacaatatt
      421 gcccgcaagt cggtcctgcg ccggcgctgg cgcaggctgc aaccctgccg ccaccgccgc
      481 cgctcgcgga gaacggcgcg tgccaagcaa ccatctacgc agagcccaat tttggcggta
      541 actcagcccc gaccggcgac agccagccga atctctcaca gaccggatgg cgcaacgaaa
      601 tctcttcgct cgtggtgggg gccggcacct gggagttctt caccgacgag aacttcggcg
      661 gtgaatcgat gcgtctcccc cctggcactt acccaaccct gtcggcggag tggactaggc
      721 agatcggttc cttcatgtgc gtgcagccgg ggcccccgcc agcataaggc ttttggaaac
      781 gcggatcatt gcgggttgcg cccgaggtgg cccagaattc acaaccgcgt ctgctcgact
      841 cctgggcagg tggcaataca gcacatgcgc ggttgcgcat aagaccacga acggcaggac
      901 cgaaacccag attcctagtc agacgcccgg cctgtccgtc tgaaagtcgc cctcggccgc
      961 accgcacggc ccgaaagcct tctttgcaat tacatatcca taatctagga atcgaccccg
     1021 ttcaccgcta tggtccggcc gccccttttt gaaatcgctg aacgtaaagg ctgcttccat
     1081 gacggaacga atcgtacccc atttccacaa cgacgcgggc gttgccgtta tcgaaatcgg
     1141 cgccaaggag ttcatgtgcg tcggcgcgct gccgccgttc gaccacccgc atatattcct
     1201 cgatatgggt ggcgacagcg agatcatatg tggctattgc tcgaccttgt accggttcga
     1261 tccggccctt gctcccaatg cggcacgtcc tccggaatgc gcgcttgccg agacggaaac
     1321 agcctgagat cgagcatccg gagagaatgt gactgcggat ggcgtattga ttgctggtgc
     1381 cggaatcggg gggttgacgg cagccttggc gctcgcccgg cacggcatca aagtcacgct
     1441 gttggaccag gcagaagaac tggcggaagc cggcgccggt attcagccct cgcccagtgc
     1501 caccgggatt ctcgttgcgc tggggctcgc agagcgcctg aagccgtcga ttgtccagcc
     1561 ctccgccatc cggcacggca gcgccagacg ggccgaaacg gattgcaacg gagcagccct
     1621 gatcggagcc gacggattgt ggtcgcgcct gcgggcgctg cttggcgaca gcacggcgcc
     1681 acgctttgcg agccgcaccg ccttccgagc gatcgtgtca gcgacccaac tctcgccgca
     1741 agaccgcgag cctgttgtca atctgtggat cggccccgac gggcatttgg tacactacgc
     1801 ggtccgggcc ggcaccgccg tgaacatcgt cgcagtcgcc ggcgaccgat ggcagagcgc
     1861 ggcatggagc accggcgccg agcgcgacga gttgattgag cgatttcccg cgccggcgtg
     1921 ggcaccagcg gcccgcgaac tgcttgcagt gccggaacgc tggcaaaaat gggcgctctg
     1981 cgatcgtatc cctacaacgc tgtggggatg cggaccggtg acgcttctcg gcgacgcggc
     2041 ccataccctt cctggctcag ggcgccacga tggcgatcga ggacgccgcc gttctggcgc
     2101 gcgagctcgc ccgctcacca ggcgatcgca acactgccct gcgcaactac gaaaccacac
     2161 gccagctgcg cacagcccgc gtgcaatatg ccgcacgccg ccacgatatt cgctatcatc
     2221 tgcggcagcc ggctgctttt gtgcgcgacg ccatgctgcg ggcgcctggc ggcgagcggc
     2281 tgctcacacg atatgattgg ctctaccgat ggcgtccgtg aactctgctg ccgcttggac
     2341 ggcgcgtttg ctttagcgtg ccattccgca cgacacagta ggttggtcca aaagcgaact
     2401 cgccctccgc cggtcaattg acttgcgcgc gatcttaccc gaacagtccg ccagcttttc
     2461 gagcgctgaa aggtgaagaa tgtttccaac caccatcgcc ggcagcctgc ccaaaccgtc
     2521 atggctcgcc gaacccggca agctgtgggc gccatggcgg ctaaccggag cggagcttaa
     2581 gaccgcgaag ctcgacgcca cgctcctcgc catcaagctg caagaacatg ccggcatcga
     2641 catcgtcacc gacggcgagc agtcgcggca acacttcgtc cacggcttct tggaatccgt
     2701 catcggcatc gatttcgcaa aacgcgtcga aatgggcatc cgcaacgacc gctacaaggc
     2761 catggtgccg accgtgaccg gaccgctgtc gcttaaagac cgggtgcatg ccaccgaagc
     2821 acgcttcgct cgcgcccaca ccgacaaaaa actgaaactt actctacccg gtccaatgac
     2881 catcgtcgac accatcgcgg atggttacta cggcgatcgc atcaagatgg cgttcgcatt
     2941 cgcggacgtg ctcaaccagg aagcccgggc gctcgcagcc gacggcgtcg acgttatcca
     3001 gttcgacgag ccggccttca atgtctatat ggatgaggtg gtagagtggg gtatcgcggc
     3061 gctgcatcgc gccgccgccg gcctgacttg cacgactgcg gtccatattt gctacggcta
     3121 tggcattccg gcgaatgtcg aatggaaggc atcgcttggt gccgcatggc gtcagtacga
     3181 acaaatcttc cccgtgctgg ccaagagcga gctccaacag atttcgctcg aatgccgcaa
     3241 ttccaaggta ccgctcgaat tgttgaggct gcttgacggc aaggatgtgc tgcttggcgt
     3301 catcgacgtg gcgaccgcgt tcgtcgaaac gcccgaagaa gtcgccaccg tgatcggcga
     3361 gacgctgcgg tacgtgccgc gcgagcgcat catcccgtgc accaattgcg gcatggcgcc
     3421 gatgcaccgg gatatcgcgg ccgccaagct gatggcactt ggggttggca ccaagctggc
     3481 gcgagaacgg tttggatagg agtacgatat gtaactcccg ggctgccgct ggtacctcct
     3541 ccaaattccg gggtgctatc aatgcatacg caaatcgcct aaaaataggt agaatcaatt
     3601 cgatggctgg aggacgcagc cagatttggc gggggaggaa aacaatgtgg aatcaagtct
     3661 atgatccgtt cggcaatacc acgttatcca ccctcgcggc ggccttgccg gtggtcacgc
     3721 tgctggtgct gatcgcatcc aacaaagtca aagcgcacat tgcggcgatc attgcgcttg
     3781 tcgtggccaa tctcgtggcg atcgtgatct ttaccatgcc ggccggcatg tcgttgcggg
     3841 ccaccgtgct cggcgcagtg accggattct ttccgatcgg ctggatcgtc ctcaacgtga
     3901 tcttcctcta tcagctgacg aaagaaaaag gcgcattcga agttttacaa accacgatcg
     3961 gcggggtctc tgcggaccgg cggctccaat tgttgctgat cgccttctcg tttggcgcct
     4021 tctttgaagg cgcatccggc ttcggtaccc ccgttgcggt caccggtgcg atactgatcg
     4081 ggcttggctt ctcgcccctc gccgcatcgg gcctgtcgct gattgcgaac acggcgcccg
     4141 ttgcctacgg ggcgctcggt acgccgatcg ccggcctcgc gagcgtgacc gggatcgacc
     4201 cgttcctgct cggcgccatg gtgggccgac aattgccgtt cttctcgtta atcgtgccgt
     4261 tctggctgat atgggcgttc gctggctggc gcgggatgat gcagatctgg cccgcgacct
     4321 tggtgtgcgg cgtgtcgttc gcgattccgc aattcgtgat ctcgaactac atcaatccat
     4381 ggatcgtgga cattggcgcg tcgcttatct cgatggcctg cctgatcggc ttcctgcaag
     4441 tgtggcagcc gaaggagtta tggctttcgc ccaagctgcg cagtcgcgac gattcggccg
     4501 cagccatgcc ggcgccgacc gcggccgcaa ccgtcaagcc aaccagcggc gaggtttggc
     4561 ttggactgct accctggatt atcgtctgcg cgatcttgct gctgtggggc accgactggt
     4621 tcaaggctca cgtcaatccg tgggcgattt ggacctatca ggtccccgac ctgcacaaca
     4681 tgatcaacaa ggtggcgccg gtcgtatcga cgccgaccaa agaaagtgct gcattcgcct
     4741 tcacgtggct gtcgtatacc ggctcgggaa tgctgatcgc ggcaataatc tcagggttcg
     4801 tcatgggctt ttcaccggcc aagatcgtga tggtatatgg acggacgatt aagatatgcg
     4861 cctattcgct catcaccatc tcggcgatgc tggcgatcgg cacgcttacc cggctatccg
     4921 gcatcgatgc taccctcggc ctcgctttcg cgggcgccgg agtgctctac ccgttcttcg
     4981 gtacgctgct cggttggctc ggtgtcgcgc tcaccggttc cgacacggct tccaacatct
     5041 tgttcggcaa tctgcagaag atcacctccg agcagttggg cttgtcgccg atcctgatgg
     5101 gtgcagccaa ttcgtccggt ggcgtcatgg gtaagatgat cgatgcccaa tcaatcgtgg
     5161 tggcctcgac cgccaccaac tggttcggcc acgaaggcac catcctgcgc ttcgtgttcg
     5221 gccactcaat cgcactcgct tgcctcgtcg gcctgctggt gatgctgcag gcctatgtgt
     5281 tcaccggcat gatcgtgcat tgaattgcaa ccagccatta cggcagtttg cgatggtcga
     5341 gtccgatcgg tcaaatgcct gccgcggacg tgtccggcag atggccgaga cgggatgtgc
     5401 gattccgcaa cgcggtcctt gagcacggct cgccacagcc atctgttggg gcgacgccga
     5461 cggttggcgg ccgaacacga tcattgcgat caggcgcggc cgcctttgca gtgccctcag
     5521 ggcgatgtcc ccatccttcg gcttcggcat cgacaatttc gaccgccgcg atcacgccca
     5581 tagccggcga tgagccgacg ccacagcggc ggctcgacgt caactcttgg ttcctgataa
     5641 agcgcatcgc gcccatgcgg gttgatcaac aagaggtcga gatcggacga ccgactcgca
     5701 cacataaaac gcgtgccctt actgacgcta ctgccgaacg gaatgcgacc actcacccgc
     5761 acgcagtgat ggcatctggt cacgatcctc agggcccgcc atgcaaagga cggaacgagg
     5821 atcgcaacat cttcagcgtg catcatcgac ctttgcaatc tgtggtctgg ctaccggcct
     5881 gcgcggccgg cttgccattg atgaagacat tcgacgaacc agcgaccacc gccccaccac
     5941 atccgcttcg tccccccgcg atcgccgccg ggcgcccgtt gatgaaaacg ttgggcgagc
     6001 cttcgaccac gggggcacca tgcgtggtgc cgtcgccgac acgcgccgcc ggcttgccgc
     6061 cgatcatcgt atcgggactg ccctgcgtca cgacgccggc cggctgggcg gcaacaaccc
     6121 caccgcacaa gatgaccggg atcgcaaaca ccaaccccat tgtttgcatc gggaacctca
     6181 tcgctccata agcaaggtta tcgccggaac gtcttgacct ccgatacgct gccgtcccga
     6241 taggtgattt ccaccgatac cgatccggtc gtcgacggaa ccttcatgta tggctgtgca
     6301 tcggccggaa tggccatcgg gtccttctga ttgcacggcg gcagagcaat ggtccggtcc
     6361 ggaatcgtgg aatcgagccc gatgcggatt tgccggatgg cacagcgata cgacatcaga
     6421 tgcgtgtaat agagcaacag gccgttgaat tctcggaaag aaagccagtt gcctgcagtc
     6481 atctcaagaa ttttacgctg ctcgcgctca agcgtcgcga cgggatcgaa gcggatcggg
     6541 aatggccctt gcaggccacc gttggtgtcc acatagcgca cgtagaccgt ggttgccggc
     6601 tgatccgcat cgagttggat cgacgggttg ggcatacgcc tgcgggtgcg cggatcgaat
     6661 gcgtcgagga agccgctctc gcgaaaactg ccgacctcgc caagacgcca agaaatcccc
     6721 gtgaccggtt ccgcaaacga gaacgccacc gaccagcccc cattgtgtcg tatgaatgat
     6781 gcgatcggag cgttggtcgg cgcggtcatc agcttgccga tctgcgcgcc gctcgccggt
     6841 ggcagcatcg caagttggct tttcttcaac tcgtctgcgc gcccccgcgc ctcgtgggcg
     6901 tgccggctgg tcgggtattt gctcgcaaac tcctcgaaca cagccgccac ccccgaatcc
     6961 ttgatggccc cccaaaggat ctcgtcggcc gccacgggcg ccgccggcgt gacatccacg
     7021 tgctgtagtc ccggcttgcc gaagccagcc agataaacct caccgagcag cgaggagttg
     7081 tcccagggga tttgccggcc ctgggtctcg gccgcgacat cggcgcgaac ccgggtgagc
     7141 atctgacgca cctcaagccc gggcgtgcgc atgtgcttgg ccaacgcccg ggtgaaaggg
     7201 ctgttggagc tggtgccatc gagcgccacc gcattcggcg cagtcgaaaa cgcgatcagg
     7261 gtcccggtgc cgaggttgga gtagccggcc agccccggca ggaccgtgac ggatcgcgtg
     7321 gccgccattc gcgacgcata ggtttgtgca aacggattgt tacgacacgc atcgaggatg
     7381 atgatgttgg cgcgcagcgc gtcgttaagg ttttccagga tgttgtcgag cgcaatcgtt
     7441 tcgaaattga gatcgcttgg cgactccagc ctggtatcga ctgggatcag atagttgcgg
     7501 ccgtcaacct gcatcccgtg gccagcgtaa aaaagcagcg ccacgctggc gctcgcggtg
     7561 cggcgaagga attcgcgaat ctggcgttcc ataccgttgc ggtcgagatc gacaccctcg
     7621 gcgactgtga aaccgatctc gcgtagcgtc cgcgccatgg cgcgcgcgtc gttgcctgca
     7681 ttgggcagac tattggtgcg cacgtacttg ctgttgccga cgaccagcgc cacccgatcc
     7741 tgcgcagcca ccggagtgaa ccccgcgacc gcgatcagcg cagcaaggca caggcttgcc
     7801 cggacaccga tccaacgctc cattgcgcag tcctcgtaaa ccagaatggc atcggcgcat
     7861 ccggcgaaac gatcgttgat tcatctgcgg atggcgacgg cactccgtgg cgcggcaatt
     7921 cgactgtttt ggggcagatt gaaaaaggca cagaatgtgc cggtgttagc tggaaaccgc
     7981 gacgttagcg ccacagccgg ctgatgaagc gcggtacgat gtcatttgag cgcagttgga
     8041 ccttggtgaa aagaagtggc ggcgtctcgc ccggcgagaa ttcgacgcgc aggacctgct
     8101 ggcgttcgac aggcgtgaaa gcacgctgaa actcgcgcgg cagcgcggca gcgaatggtt
     8161 cgaccctgac aataatgccc cccgcgctcc gcaatccgct cttgatttgg acgtgatcac
     8221 cgatggcgac gtcatagagc ccgcctgtcg gcaaataagc gaggacgaag ggtggctcgc
     8281 cggcaatctc gatgagcggt tcaccggcac gcacgaccgc gcccttgtcg gcccgaagat
     8341 gactgacgat gccgtcgatc ggcacgcgca ttttcccgtc gtcgtaaagg tgtcgaagat
     8401 cgcggaccgc ggcttgtgct tcaagtgatg ctgcttgcag ctcgttgatc tccgcgtcga
     8461 ccacgcgctt ttcggctttg agggcttcga gatcctgcaa actacggaat tcgctttcaa
     8521 ccgccgcggt gcgcttgtcc agcgaaagca ggccactttt cagcagcttc tccatctcgg
     8581 cacgagcgcc ggtcgtgacc tcctgccgca tctcggcgag cttgataatg gcctcggcct
     8641 tctccccacg gatgcgcagt tcgcttagcc gcgcttcacg tgccgcgaga tccgcggtga
     8701 gccgggctat actctcggcg acggtctgcg acgtgacgac caccgccaca ctgccggact
     8761 tgacgcgctc accctcgtgc accaatagat cgcgcaccgt gaccgggaat tccgcggcaa
     8821 tcaccgccgg ctcgccaagc acgagccctt cgctgcgcag gtagaacagg ctgcccagga
     8881 agagatcgcc aagccaggcc gcgagggcaa aaaggcacga gaaatagacc cagcggatca
     8941 ccctcagacg atttgaacgc ggctcattcg gcagagcatg cagcgtcggg cgaactttta
     9001 agcgacgcat cacatgtgct caatttggcg caggacgcgt gacgggacaa agggatcacg
     9061 atcggagctg cggaacacca cctcctgcac gatcgcgatc aagcgaacgc cccgcataag
     9121 cgtcatctgc atcagcgtgt agaatggaat gtacggcaga agacgcagcg gatgcgtaag
     9181 cccccctatc gccgcaaacg cgaaggccag gatgtcggct agaaaatagg caatcagcgt
     9241 cgccgcaatc acggtccagg cgaaatcggc gaaatagtag aacagccaga ccaggtagac
     9301 cgggaaagcc agcgcgagca ccgcctggta gaatatcacg tcgacgactg cccatacttc
     9361 gagcatccga aatgtcga
//
LOCUS       DATILV010000493         1750 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4971135, whole genome shotgun sequence.
ACCESSION   DATILV010000493 DATILV010000000
VERSION     DATILV010000493.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1750
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4971135"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..770
                     /locus_tag="VLJ17_11180"
     CDS             <1..770
                     /locus_tag="VLJ17_11180"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSV23579.1"
                     /translation="SASNASAEDFFYRDDWFGEPWRKPEAAVLIHGNAESSIVWYGWL
                     PRMGQEFRVLRPDLPGLGRSRIPAGFEWSLPSLAAFVAHILDKAGADSAHIIGAKAGG
                     AIAMQFAADYPARTRTLSVVHVPSVERDRNISEPSFAPQSARLGSAASKEMVDYWANM
                     FATAPEIPAKGLLTAVSKSDPSKDGLLQRIKAPTLLMTADRGQSQSVEKARQYQTLIP
                     NSRLVVLQSDGYHIAASNSDECVTNVLAFIRKAGKGA"
     gene            complement(1451..>1750)
                     /locus_tag="VLJ17_11185"
     CDS             complement(1451..>1750)
                     /locus_tag="VLJ17_11185"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HSV23580.1"
                     /translation="APAILVPPPWRYVALSIAGLYATAVAGIRMLAGGHFLSDVIFAA
                     IFTGLVIWTVHGFLYRWSATRMEQSTFDAVLAKFGRRIFAVLAPSRNTRPDKPTP"
BASE COUNT          360 a          510 c          549 g          331 t
ORIGIN      
        1 catcggcgag caatgcatcc gccgaggatt tcttctaccg cgacgactgg ttcggtgagc
       61 cttggcgcaa acccgaagcc gccgtcctga tccacggcaa cgccgaatcg agcatcgtgt
      121 ggtacgggtg gctgccgcgc atgggtcagg aatttcgggt gctgcggccc gacctgcccg
      181 ggttgggcag gtcgcggatt cccgctggtt ttgagtggtc gctgccgagt cttgccgcct
      241 tcgtggcgca tatcctcgat aaggcgggcg ctgactccgc tcacatcatc ggcgcaaagg
      301 ccggtggcgc gattgcgatg cagtttgccg cggattaccc ggcccgcacg cgcacgcttt
      361 cggtggtcca tgtgccatcg gtggaaaggg accggaacat ttcagagccc tcctttgctc
      421 cgcagtccgc ccgccttggc tcggccgcat cgaaagagat ggtggattat tgggcgaaca
      481 tgtttgcgac ggcgccggaa atcccggcaa aaggtctact caccgcggtt tccaagtcag
      541 acccgtcgaa agacggtcta ctgcagcgca tcaaggcgcc gactctgctg atgaccgccg
      601 accgcggcca atcgcaatcg gtggagaagg cgcggcagta ccagacgctc attcccaatt
      661 cgcggctggt ggtcctgcaa agcgacggct atcacatcgc cgcatcgaac tccgacgagt
      721 gcgtcaccaa cgtactagcc tttattagga aggcaggaaa aggggcttag ccggtcgctg
      781 ctgtcagtga atgcaaaaaa tgagagagtg caacggggcg ccaccagcag gtgttgcttc
      841 acgctggtta cgcagttcac gctacccctg tgaattgacg acactatgac ggtcgacgtg
      901 cgtctgcgtg gcgatggtgg ccgcgagcaa cctgctgctc atctcgccaa cgagtcactc
      961 ctccccctgt tggccgactg gatcgtcgat gcgcggccgc ggtttccagg tatcccacgc
     1021 agttgcgttc ggtccggcgc cgggatgtcc gcattcgctg catcgcatct gcggcttgaa
     1081 ggatggcacc gtacagtcat ccggccaggc atcaacgttg aggctggtgg gaagccacag
     1141 gcgttagagc tgacatcagg cggggtgcgg gccaatgccg cgcatgttgc cgggcgtcat
     1201 cggtcagccg gtttaagcgt gcaacaaaga tctcgcctag caaatttcgc caaatcggcc
     1261 caggccacaa cacccgtgac cagtaaatga tcagagcttc gcgggatttc gctggcaact
     1321 gaataaattt tgacgcgagc tacaccaatc ggaacgcaga actgccaacg gcgagtatgg
     1381 gtcattcgaa gttcgcagaa atggcacgca agcgcggatt tccatccgta agcccggatg
     1441 acgagtccga tcagggggtt ggcttgtcgg gccgtgtgtt acgggatggt gccagaaccg
     1501 caaaaattct gcgcccgaat tttgcgagca cggcgtcgaa ggtactttgc tccatgcggg
     1561 tggcggacca tcggtacagg aacccatgga cggtccatat cacgaggccg gtgaatatgg
     1621 cggcgaagat cacatcggac aggaaatgcc cgccggcaag catacgaatg cctgcgactg
     1681 cggtagcgta caatccagcg atgctaagcg cgacgtagcg ccaaggagga ggcaccaaaa
     1741 tggcgggagc
//
LOCUS       DATILV010000494         3123 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_626153, whole genome shotgun sequence.
ACCESSION   DATILV010000494 DATILV010000000
VERSION     DATILV010000494.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3123
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_626153"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1001)
                     /locus_tag="VLJ17_11190"
     CDS             complement(<1..1001)
                     /locus_tag="VLJ17_11190"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HSV23581.1"
                     /translation="MVEKVLAAVRTGPSKTEFREFPMPDIPEDAALMKMEVAGICGTD
                     VKLYKTPPSLTPVIMGHENIGTIAKAGREFTRRKGFREGDLVFVEHYVACGKCEWCHL
                     GQYRHCENTDWRYNPDAIRYGYTSAEKAPHLWGGFAQYVYLPWNAVLHHVPKGVTPEL
                     AGLVTPMANGVEWSLFDGGVGYNSTVLIQGPGQQGLSQTVICKQAGASLIIVTGTSKD
                     GARLEVAKKLGADYVIDVAKEDPLARIMEITGRKGVDVVLDCTAGAGTVPVLLGVEAL
                     KRKAGTIVVQGEMTDFPNFPIGRVTVKFITIKSARGHSFKACELALAQLASKRFPLE"
     gene            complement(1076..1378)
                     /locus_tag="VLJ17_11195"
     CDS             complement(1076..1378)
                     /locus_tag="VLJ17_11195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HSV23582.1"
                     /translation="MSGANEIIHQAMRLKIMAALNALVPKTTAIEFTRLKALVGATDG
                     NLGAHLDTLEKAGYIVIEKRFEKRKPQTRIRMSPDGRRAFVEHVAYLREILDDAGA"
     gene            complement(1375..1944)
                     /locus_tag="VLJ17_11200"
     CDS             complement(1375..1944)
                     /locus_tag="VLJ17_11200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23583.1"
                     /translation="MTIDPGEAAASLQNIAIVEQRTREAVFYAGSSAIFVMWGLLVAC
                     GYGLTELYPRSAGITWLVVTAAGCAATALFIAVRTRARPKEARDWRIVWAMVALTVYG
                     AAWSHVLGPIVPQSIHYAFQPSLYLLGIILAGLWLGRVFIILGLVGIALMLVGYLQAE
                     PWLRLWMAVVQSGTLILGGVWLHRSGVPR"
     gene            complement(1949..2623)
                     /locus_tag="VLJ17_11205"
     CDS             complement(1949..2623)
                     /locus_tag="VLJ17_11205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23584.1"
                     /translation="MRWRSFLYITAFAAVGAATAGLAQERFDYAVRDDMFRAFGGNEA
                     AYKSAMSTIEEKLKDEPDHAVALVWRGAGLYFKAGQAFGVGDIAGATTLAKAGMADMD
                     RASQLEPNNIGVLIPRSSVLLAASRNQRDLDRARDLAARAATGFETALAIRQSAFAQL
                     GLHNRGEYLSGLAESWALAGHRDKAEGYLRRILAELPNSPYAERAATKLADWDDRRPL
                     NCQTCH"
     gene            2867..>3123
                     /locus_tag="VLJ17_11210"
     CDS             2867..>3123
                     /locus_tag="VLJ17_11210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23585.1"
                     /translation="MAAGTAKLRLSRRSAQHHEALDRVREWTRERFGLPEAASILVTE
                     VACGLPGCPPLETIVVFWTGDARRHQFKVFKPVREVISDDLP"
BASE COUNT          611 a          980 c          943 g          589 t
ORIGIN      
        1 aactccagcg ggaaacgttt cgaagcgagc tgcgccagcg caagttcgca tgccttgaag
       61 ctgtggccgc gcgcgctctt gatggtgatg aacttcaccg tcacccggcc gatcggaaag
      121 ttcgggaaat ccgtcatctc gccctgaacc acaatcgttc cggccttgcg cttgagcgcc
      181 tcgacgccga gcagcaccgg aaccgtgccg gcgccggccg tgcagtcgag taccacgtcg
      241 acgcccttgc ggccggtgat ctccatgatg cgggcgagcg ggtcctcctt ggcgacatcg
      301 atcacgtagt cggcgccaag cttcttggcg acctccaggc gggcgccgtc cttcgaggtg
      361 ccggtaacga tgatgagcga agcgcccgcc tgcttgcaga tcacggtctg ggacagcccc
      421 tgttggcccg gcccctggat cagcaccgtg gaattataac cgacgccgcc gtcgaacagc
      481 gaccactcga cgccgttcgc catcggggtg accaagccgg ccaattccgg cgtcacgccc
      541 tttggcacat ggtgcagaac cgcgttccag gggagataga cgtattgggc aaagccgccc
      601 cacagatgcg gcgccttctc agccgacgtg tagccatagc ggatggcgtc ggggttatag
      661 cgccagtcgg tgttctcgca gtggcggtac tggccgagat ggcaccactc gcatttgccg
      721 caggcgacat agtgctccac gaacaccaga tcgccttccc ggaaaccctt gcgccgcgtg
      781 aactcgcggc cggccttggc gatggtgccg atgttctcat gtcccatgat caccggcgtg
      841 agcgacggcg gcgtcttata gagcttgacg tcggtaccgc aaatgcccgc cacttccatc
      901 ttcattaacg cggcgtcttc cgggatgtcc ggcatcggga attcgcgaaa ttccgtcttg
      961 ctcgggcctg ttctcacagc cgcaaggact ttttccacca ctgcgcctct cgcaatcttg
     1021 tcgatgtgac cggcactgta ggaccgcgcc cggaacggtc aagcggcgaa tgagattagg
     1081 ccccagcgtc gtcgagtatt tcgcgcaagt aagcgacatg ttctacgaag gcgcggcggc
     1141 catcagggct catccgaatt cgcgtctgcg gcttgcgctt ctcgaagcgc ttctcgatca
     1201 caatataacc tgccttctcc aacgtatcga gatgcgcccc gaggtttccg tcggttgctc
     1261 ctacaagcgc cttaagccgc gtaaattcga tggcagtggt ctttggtacg agcgcgttga
     1321 gcgccgccat gatcttcaat cgcattgcct ggtgaatgat ttcgttggcg ccgctcatcg
     1381 cggcacgccg cttctgtgaa gccaaacgcc gccaaggatg agcgtgccgc tttggacaac
     1441 ggccatccac aagcgtaacc atggctccgc ttgcagatat ccgaccagca tcagggcgat
     1501 cccgactaag ccgagaatga tgaagacacg ccccagccac aggcctgcga ggattatgcc
     1561 aaggaggtaa agcgacggtt ggaacgcata atgtattgac tgcggcacga taggcccaag
     1621 gacgtgggac cacgcggcac cgtaaacagt cagcgccacc atggcccaga cgatgcgcca
     1681 gtcgcgtgcc tcctttgggc gggcccgcgt gcgcaccgcg atgaagagcg cggtcgcggc
     1741 gcaacccgcc gccgtaacaa caagccacgt gatgcctgcc gagcgcggat aaagctcagt
     1801 cagaccgtag ccgcatgcaa caagcaatcc ccacataaca aagattgcgc tgcttccggc
     1861 gtaaaagaca gcttcgcgag tccgctgctc gacaattgcg atgttctgca aggaggccgc
     1921 cgcctcgccc ggatcaatag tcatcggctt aatggcaagt ctgacagttg aggggccgcc
     1981 gatcgtccca atcggcgagc tttgtcgctg cgcgttccgc gtagggcgag ttcggaagct
     2041 ccgcgaggat ccttcgaaga tagccttctg ccttgtcccg atgaccggct agcgcccaac
     2101 tttccgcaag gcccgagaga tattcgccgc gattgtgcag gccaagctga gcaaaagctg
     2161 attggcgtat tgccagggcg gtttcgaacc cggtcgccgc acgggccgcc agatcacgcg
     2221 cccgatcaag atcacgttga ttgcgcgaag cggccaacag caccgacgac cgcgggatca
     2281 aaaccccgat gttgttcggt tccagctggg atgcgcggtc catgtcggcc atcccggcct
     2341 tcgccaaggt tgtggcgccg gcaatgtcgc cgactccgaa agcctggccg gccttaaagt
     2401 agaggccagc tccccgccac acgagagcga ccgcgtgatc gggctcatct ttgagcttct
     2461 cttcgatggt cgacatcgca ctcttgtacg ccgcctcgtt gccgccgaag gcacgaaaca
     2521 tgtcgtcacg aaccgcgtaa tcgaaacgct cctgcgccaa gcccgcggtg gcagcgccga
     2581 ctgcggcgaa tgccgtgatg tagaggaaac tgcgccatct catggtaggt ctcccattag
     2641 cagattagag aactctataa tacagagtac tccatgtcaa gataacaggc agcgcagctt
     2701 ggtcccgggg tcctcctgcg cgacgtggcc gaggttgcta ctctggccgc cgcaagacga
     2761 ggaaatttgc cggccctgcg gcagacgctg ccagccgggc tgcggcgttg agggccatat
     2821 cggttcagag tcgcggccgg cgcggctcag tgtatgatta tttgccatgg ctgccggaac
     2881 cgcaaagctt cgcttgtcac gaaggagcgc ccaacatcat gaggcgctgg accgggtgcg
     2941 ggagtggact cgcgagcgct tcgggcttcc cgaagcagcg agcatcttgg tcacggaagt
     3001 cgcctgtggc cttccgggtt gtccgccgct ggagacaatt gtggtgttct ggaccgggga
     3061 cgcgaggcgg catcaattca aagtattcaa gccagttcgg gaggtgataa gcgatgacct
     3121 ccc
//
LOCUS       DATILV010000495         7242 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_626174, whole genome shotgun sequence.
ACCESSION   DATILV010000495 DATILV010000000
VERSION     DATILV010000495.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7242
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_626174"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..973
                     /locus_tag="VLJ17_11215"
     CDS             <1..973
                     /locus_tag="VLJ17_11215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutamate--tRNA ligase family protein"
                     /protein_id="HSV23586.1"
                     /translation="EDHRPLYDWFLEHLPVPSRPHQYEFARLNLSYTVLSKRVLTELV
                     RGGYVTGWDDPRMPTLAGLRRRGVPPEALREFVRRIGVAKANSVVDVAMLEHAIREVL
                     NTTALRRMAVLRPLKIVVENYPEGQGEELEAVNHPDNPGAGTRRVRFGRELYVERDDF
                     MENPPKKFFRLSPGKEVRLRYAYFITCREVVKNAAGEVIALRCTYDPATRGGNAPDGR
                     KVQATLHWVGAADAVTAEVRLYNQLFAKPDPDVGNFAADINPDSLEVLGDAKVEPAAA
                     SSNSPAAVQFERLGYFARDRDSAPDRPVFNRTIGLRDTWGKVQGGGR"
     gene            complement(1243..2652)
                     /gene="glnA"
                     /locus_tag="VLJ17_11220"
     CDS             complement(1243..2652)
                     /gene="glnA"
                     /locus_tag="VLJ17_11220"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HSV23587.1"
                     /translation="MTTAKDVLKLIKDNDVKYADFRFTDPRGKWQHVTFDIGIIGEET
                     FSEGQMFDGSSIAGWKAIHESDMCLMPDPGSACIDPFYAETTLVLVCDVLEPTTGEPY
                     SRDPRGIAKRAEAMVRSMGVGDTVYFGPEAEFFVFDDVKYSAQPYNTGFRLDQVEFPT
                     NSDTDYEGGNLGHHIRVKMGYFPVPPQDTFQDMRSEMLGAMAKMGVKVEKHHHEVASA
                     QHELGMKFSPMVTMADQLQIYKYCIQQVAQIYGKTACFMPKPVYGDNGSGMHCHQSIW
                     KDGNPVFAGNKYSDLSEICLSYIAGVIKHAKAINAFTNPTTNSYKRLVPGFEAPVLLA
                     YSARNRSAACRIPWTTSPKAKRVEVRFPDPLANPYLGFAAMLMAGLDGVKNKLDPGPA
                     VDKDLYDLPPAELKQIPTVCGSLREALGCLDADRGFLKAGGVFDDDFIDSYIDLKMSE
                     VIRFEHTPHPVEFEMYYSA"
     gene            complement(2711..3049)
                     /locus_tag="VLJ17_11225"
     CDS             complement(2711..3049)
                     /locus_tag="VLJ17_11225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HSV23588.1"
                     /translation="MKKIEAIIKPFKLDEVKEALQEVGLQGITVTEAKGFGRQKGHTE
                     LYRGAEYVVDFLPKVKIEIVLGDDMVEKAVDTIRRAAQTGRIGDGKIFVSKIEEAIRI
                     RTGESGLDAI"
     gene            3385..4884
                     /locus_tag="VLJ17_11230"
     CDS             3385..4884
                     /locus_tag="VLJ17_11230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052855 - ADP-dependent NAD(P)H-hydrate
                     dehydratase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HSV23589.1"
                     /translation="MFELLTNAEMSEADRRTIASGICGRTLMENAGAAVASAVSARHP
                     PGSKVAIVAGTGNNGGDGFVAAHELRQAGYRAAVHLVGRRDAIKGDAAEAARQWDGPL
                     ATGTPDFAGAHVIIDALFGAGLDRPVAGEALAAIAAVNGAGVPVIAVDLPSGINGTTG
                     AVLGDAVNAHRTITFFRKKPGHVLLPGRNHCGEVQVAQIGIPADVLAHIRPAACENSP
                     ALWAGRFPIPASEGHKYSRGHAVVVSGGRVRTGAARLAALAALRGGAGLVTLATPRGA
                     LDVNAATCLAVMVRPIDTATEFETMLADHRFNAVAIGPGAGVGLNTREMSLAALAGPR
                     QVVLDADALTSFTDHVELLFAALSKNRNAVLTPHSGEFHRLFDKSLENISAASASKLC
                     AAQAAASIAGAVVVYKGADTVIAAPDGRVAVNANAPPWLATAGTGDVLAGLITGLAAH
                     GMPAFEAAAAAVWVHGEAATAAGPGMISEDLAPQFGEIYRRLFTSCLRR"
     gene            5055..6155
                     /locus_tag="VLJ17_11235"
     CDS             5055..6155
                     /locus_tag="VLJ17_11235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23590.1"
                     /translation="MTDTVLHSPPIASTPKKWKGIHAAFRVSKPSEEQASLHMLSLAR
                     TNLGVRLRAIDEASLVLDYQKKIYVTVTEILKAPLKSNSTARSFEWDEIYKAESLIAL
                     LYSGEQLRHEIDARLQELATVDQVEVDNLRRDNQALLRQPADGSNLGLDDSIFRVLLL
                     RVLESIHWNAKKKFLAGPLRVQATNRILICLLASFVLLVAPYGLLISDYDTADSPVHK
                     IWSLFALYTALTAGLLGAFSSRLYGIQHQWAHMNLDEVFLQREWPYTLLRAGVGLCGA
                     LIAYIFLRSGIAEGALFPKFGAVRIELVTVAGDDAVPAIAMAFAMPSKDLALLTFWCF
                     LAGFSETLVSSILKSTEQELADAATPAQAARK"
     gene            complement(6224..>7242)
                     /locus_tag="VLJ17_11240"
     CDS             complement(6224..>7242)
                     /locus_tag="VLJ17_11240"
                     /inference="COORDINATES: protein motif:HMM:NF012612.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="multicopper oxidase family protein"
                     /protein_id="HSV23591.1"
                     /translation="VNGLDEPMTLHWHGVRLPNAMDGGVPLTGPPVAPGASFDYRFPV
                     PDAGTFWYRATRRAQQERGLYGALIVAEPVPPPVDRDLVLVFGDRRSNSGTRQFTLNG
                     AATLDISVRPNERLRLRFVNASVTQMMNARIEKHRVVVMALDGEPAEPFASRDGRVTL
                     GPGNRADVFIDATLGPGSIAPIAFTQDGDEVSLARIVYGGAPARAAPPGEPVPLPANP
                     LPARMNFSRALRFALPIEGDNAAVTGGAPPALFSAERGRTVVMALDNRNIGACAVHLH
                     GHHFRLLDRLDDGWKPYWLDTIVVPGRQTARIAFVADNPGRWLIEQHALDGTAAGANW
                     FEVK"
BASE COUNT         1344 a         2209 c         2254 g         1435 t
ORIGIN      
        1 cgaggatcac cggccgctct acgactggtt cctggagcat ctcccggtgc cctcccggcc
       61 gcaccagtat gagttcgccc ggctcaatct gagctacacg gtgctgtcga aacgcgtgct
      121 gaccgaactg gtccgcggcg gttatgtcac ggggtgggac gatccccgca tgccgacgct
      181 ggcgggattg cgccgtcgcg gcgtgccgcc ggaagcattg cgggagtttg tgcgccgcat
      241 tggggtcgcc aaggccaaca gcgtggtcga cgtcgcgatg ctcgagcacg ccatccgcga
      301 ggtgctgaac acgacggcgc tgcgccgcat ggcagtgctg cgcccgttga agatcgtcgt
      361 cgagaattat ccggaagggc aaggcgaaga gcttgaagcc gtcaaccatc cggacaatcc
      421 tggcgccggc acccggcgcg tgcggttcgg ccgcgagctc tatgtggagc gcgacgactt
      481 catggagaac ccaccgaaaa agttcttccg cctgtcgccc ggcaaggaag tacggctgcg
      541 ctacgcctat ttcatcacct gccgtgaggt ggtgaagaac gccgccggag aggtgatagc
      601 gttacgctgc acctacgatc cggcgacccg cggcggcaac gcgcccgacg gccgcaaggt
      661 gcaggcgacg ctccattggg tcggcgccgc cgacgccgtg acggcggagg tgcggcttta
      721 caaccagctt ttcgctaagc ccgatcccga cgtcggcaac ttcgcggccg acatcaatcc
      781 ggattcgctc gaagtgctgg gcgacgcgaa ggtggagcct gcggcagcgt cgagcaattc
      841 gcccgccgcg gtccagttcg aacggctggg ctatttcgcc cgtgaccggg actcagcgcc
      901 cgaccggccc gtattcaacc gcacgatcgg gctgcgcgat acctggggca aggtgcaagg
      961 cgggggacgg tgatgcctcc agagcgccgg tagacgccgc ggtagcgctt tgcccgcaac
     1021 gggattacct ggcccgcctg attaacctaa cgctaaaggg ggcgactctt gtggtcgccc
     1081 cttgcggtcg cccggtttgc gcatcggcgc cgccgccctc acaaaaaaag gcgcccgtta
     1141 agggcgcccg gagttcggat cgcgaggcga tcctgggagg aaccaacact tactcgcgca
     1201 tgatccaatc ccggaaagcc cacagcattc cgggctcgca catcacgccg aataatacat
     1261 ctcgaactcg accggatgcg gggtgtgctc gaagcgaatc acttccgaca tcttgagatc
     1321 gatgtagctg tcgatgaaat cgtcatcgaa cacgccgccg gccttgagga agccgcggtc
     1381 ggcgtcgagg cagccgagcg cctcgcgcag agagccgcag acggtgggga tctgcttcag
     1441 ctctgccggt ggcaggtcgt agaggtcctt gtcgacggcc ggcccgggat cgagcttgtt
     1501 cttgacgccg tccaggccgg ccatcagcat ggcggcgaag ccgagatagg ggttggcgag
     1561 cggatcgggg aaacgcactt cgacgcgctt ggccttgggc gacgtggtcc acggaatgcg
     1621 gcacgcggcc gagcgattgc gggccgaata ggcgagcagc accggggcct cgaagccggg
     1681 caccagccgt ttataagaat tcgtggtcgg gttggtgaag gcgttgatcg ccttggcatg
     1741 cttgatcaca ccggcaatgt aggacaggca gatttccgac aggtcggagt atttgttgcc
     1801 ggcgaacacc ggattgccgt ccttccagat cgactggtgg cagtgcatgc cggagccgtt
     1861 gtcgccatag accggcttcg gcatgaagca ggcggtcttg ccgtagattt gggcgacctg
     1921 ctggatgcag tacttataga tctgcagctg gtcggccatg gtcaccatgg gggagaactt
     1981 catgcccagc tcgtgctggg cggaggccac ctcgtggtga tgcttctcca ccttcacgcc
     2041 catcttggcc atggcgccga gcatttcaga gcgcatgtcc tgaaaggtgt cctggggggg
     2101 caccgggaaa tagcccatct tgacgcgaat gtggtgaccc agattgccgc cctcgtagtc
     2161 ggtgtcggaa ttggtgggga attccacctg atcgagccgg aagccggtgt tgtagggctg
     2221 ggcgctgtat ttcacgtcgt cgaacacgaa gaactcggcc tcggggccga aatagacagt
     2281 gtcgccgacc cccatggacc tgaccatggc ctcggctctc ttggcgatgc cgcgcgggtc
     2341 gcggctataa ggctccccgg tggtcggctc cagcacatcg cagaccagca cgagcgtcgt
     2401 ttcggcgtag aacgggtcga tgcaggccga acccggatca ggcatcaggc acatatcgga
     2461 ctcatggatc gctttccaac cggcgattga ggagccgtcg aacatctggc cttccgagaa
     2521 agtttcctcc ccgatgatgc cgatgtcgaa agtgacgtgc tgccacttgc cgcgcgggtc
     2581 ggtgaagcga aaatcggcgt atttgacgtc gttgtccttg atgagcttca ggacatcctt
     2641 ggcggtggtc atagaacaaa ttcccctttc tcaggccttc accacattgg cgaacctggc
     2701 cccgttttcg ttaaatcgca tccagaccgg attccccagt gcggatgcga atggcttcct
     2761 ctatcttgga gacgaaaatc tttccatcgc caatgcggcc ggtctgtgcc gcccgcctta
     2821 tggtgtcgac cgccttttca accatatcgt cgccgagcac gatctcgatc ttcaccttgg
     2881 gtagaaaatc gaccacgtat tctgcgccgc gatacagttc cgtgtgtccc ttttggcgtc
     2941 cgaacccctt ggcctccgtc accgtgatgc cttgaagtcc aacttcctgc aaagcctcct
     3001 tcacttcatc caacttgaac ggcttgatga tcgcctcgat ttttttcatt gccactcatc
     3061 cttggcccgc gcagttcaga cgagtatctt gcggaccaca cgcaactggc aggccgcgtc
     3121 acgtgttagc agggtccgtg ccaacctcct agaggggcca gaaacaccat catttacaaa
     3181 agcttagcgt atccttgacg cagtggccgc gaggcgccca ccttgccgat gattaatcaa
     3241 tatgcacaat gacttatatg cgcgcaaacg cgggtccctg cccctgaaat aatgcccgat
     3301 gtgattatag tttaggctcg ctttgcacag tttttgacat catacccgcc ttcgttgcag
     3361 tgcaggaatt gatatcctgg catcatgttc gagcttctca ccaatgccga gatgagcgag
     3421 gcggatcgcc gtaccatcgc atctggcatc tgcggccgaa ctctgatgga gaatgcaggc
     3481 gctgcggtag ccagcgccgt ctcagcgcgg catccgcccg gcagcaaggt cgccatcgtg
     3541 gcggggactg gcaacaatgg cggcgacggc ttcgttgccg cacatgagtt gcgccaggcc
     3601 gggtaccgcg ccgccgtgca cttggttggg cgtcgggacg ctatcaaagg cgacgccgcc
     3661 gaggcggcgc gacaatggga tgggccgctg gcgactggaa ctcccgactt cgccggggcc
     3721 cacgtcatca tcgacgcact gttcggcgct ggacttgatc gaccggtcgc cggcgaggcg
     3781 ctggccgcca ttgcggcggt caatggagca ggggttccgg tgatcgcggt ggatctgccg
     3841 agcgggatca acggcaccac gggtgcggtt ctgggcgacg cggtgaacgc ccaccgcacc
     3901 atcacgttct ttcgcaagaa acccgggcat gttctgctac cggggcgtaa tcattgcggg
     3961 gaggttcagg ttgcgcagat cggcattccg gccgatgtcc tcgctcatat tcgaccggcc
     4021 gcctgcgaaa atagcccggc cctctgggcc ggccggttcc caataccggc ctccgagggc
     4081 cacaaatata gccgcggcca cgccgtggtc gtgtcaggcg gccgggtgcg gactggggca
     4141 gcacggctcg ccgcactggc ggcgctgcgc ggcggtgccg gactggtgac gctggcgaca
     4201 ccgcggggcg cgctcgacgt caatgccgcg acctgcctcg ccgtgatggt gcggccgatt
     4261 gataccgcca ccgaattcga gacgatgctg gctgaccatc gcttcaacgc ggtggcgatc
     4321 ggccctggtg cgggcgttgg acttaatacc cgggaaatgt ctctggccgc ccttgcgggc
     4381 ccgcgccagg ttgttctcga tgccgacgcc ctcacgagct ttacggacca cgtggagctt
     4441 ctcttcgccg cacttagcaa aaaccgcaat gcggttctga caccgcattc aggagagttc
     4501 catcggttat tcgataaatc gcttgagaat atttcggctg cttccgcgtc caagctttgc
     4561 gccgcccagg ccgccgcgag cattgccggc gccgtcgtgg tgtacaaggg cgccgatacg
     4621 gtgatcgcag cgccggacgg ccgcgtagcc gtcaacgcca acgccccgcc ctggctcgcc
     4681 actgccggca ctggagacgt gctggctggg cttatcaccg gtttggcggc gcacggaatg
     4741 ccggccttcg aggctgccgc ggccgcggtg tgggtccacg gcgaggctgc caccgcggcc
     4801 gggcccggga tgatttcgga ggacctggcg ccacagtttg gtgaaatata ccggcggctt
     4861 tttacgagct gtttacggcg ttaggcattt ccgggaccgg aatatgagtc gaatcacgca
     4921 agatcgcgac cctttgatgt tatctattag gtagcggcac cgcaggtcat ccatcggtat
     4981 cgaagggggc tctacgactt cccgacgaca cctgtcgact atgccgtgac caactctgga
     5041 acggagtttc agtcatgacc gacaccgtgc tccattctcc gccaattgcg tccacgccca
     5101 agaagtggaa aggcatccac gccgcgtttc gcgtcagcaa accgtccgag gagcaggcat
     5161 ccctccatat gctcagcctc gcgcgaacca atttgggtgt cagattgcgt gctatcgatg
     5221 aggcgtcatt ggtgttggat tatcagaaga agatttatgt caccgtcacc gagatactga
     5281 aggcgcccct caagtccaac tcgaccgcgc ggagtttcga atgggacgaa atctataaag
     5341 cggaaagctt gatcgcgttg ttgtacagcg gcgaacagct acggcacgaa atcgacgcgc
     5401 gtctacagga gcttgcaaca gtggaccagg tggaggtgga taatctcagg cgggacaatc
     5461 aagctctact cagacaaccg gctgatggct caaacctcgg gctggacgat tcgatatttc
     5521 gtgtattgct attacgtgtc ctggagtcga tccattggaa tgcaaagaaa aaatttttgg
     5581 cgggcccgct tcgcgtgcag gcaaccaatc gcatactcat ttgtttgttg gcgtcgtttg
     5641 ttttgctagt cgcgccttac ggcttgctta tttcagatta tgacacagcc gactcgcccg
     5701 ttcacaaaat atggtcgctg ttcgcgctct ataccgcgtt gacggccgga ctattgggcg
     5761 cgttctccag ccggctgtac ggcattcaac accaatgggc ccacatgaat ctcgacgaag
     5821 tgtttttgca gcgtgaatgg ccatacacac ttttgcgtgc cggtgtgggc ctatgcggcg
     5881 cactcatcgc ctacatcttt ctcaggtcgg gaatcgctga aggtgcactc tttccaaaat
     5941 tcggtgcggt cagaatcgaa ttggtgactg tcgcgggtga tgatgccgtg ccggccatag
     6001 cgatggcgtt cgccatgccg tcaaaagatc tggccttgtt gactttctgg tgcttcctgg
     6061 ctggcttttc cgagacgttg gtttcaagca ttctcaaaag caccgaacag gaactcgcag
     6121 acgccgcaac tccagcccag gcggctcgga agtagagacg gtttggtctg caaaggttcc
     6181 actgttgcga cgctggtgat ctcgttcttt aagagacgca ccttcatttg acctcaaacc
     6241 aatttgcccc tgccgccgtc ccatcgagtg catgttgctc gatcagccag cggccggggt
     6301 tgtccgccac gaatgcgatg cgtgcagtct gcctccctgg caccacgatg gtgtcaagcc
     6361 aatacggctt ccagccgtca tcgagacggt cgagcaggcg gaaatgatgg ccgtggaggt
     6421 gcaccgcgca cgctccgata ttgcgattgt cgagcgccat taccaccgtg cgcccgcgct
     6481 cagcgctgaa cagcgctggt ggcgccccgc cggttacggc cgcgttgtcg ccctcgatgg
     6541 gcagcgcaaa gcgcaatgca cgagaaaagt tcatccgcgc cggcagcgga ttggcgggaa
     6601 gggggaccgg ctcgcctggg ggggctgcgc gcgcgggcgc ccctccgtag acgatgcggg
     6661 ccagcgacac ctcgtcacca tcttgcgtga acgcaatcgg cgcgatgctg cccggcccca
     6721 gcgtggcgtc gatgaagacg tcggcgcgat tccctggtcc gagcgtgacg cggccgtcgc
     6781 gacttgcgaa tggttcggcg ggctcgccgt ccagcgccat caccacgacc cggtgtttct
     6841 cgatgcgcgc attcatcatc tgcgtcaccg aagcattgac gaagcgcagc cgcaaccgct
     6901 cgttggggcg gaccgaaata tcgagcgtgg ccgcgccgtt tagcgtgaat tggcgtgtcc
     6961 cgctgtttga tcgccgatcg ccgaatacca ggacaagatc ccgatccacc ggcggcggaa
     7021 ccggctccgc gacgatcagg gcaccgtaaa gcccacgttc ctgttgggcg cgtcgtgtcg
     7081 cgcgatacca gaaggtgccg gcatccggaa ccgggaagcg atagtcaaag cttgcgccgg
     7141 gcgcgaccgg cggtccggtc agcggcacgc cgccatccat tgcgttgggc aagcgtacgc
     7201 catgccaatg aagtgtcata ggctcatcaa gcccattgac ga
//
LOCUS       DATILV010000496         7718 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3695480, whole genome shotgun sequence.
ACCESSION   DATILV010000496 DATILV010000000
VERSION     DATILV010000496.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7718
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3695480"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..354)
                     /locus_tag="VLJ17_11245"
     CDS             complement(<1..354)
                     /locus_tag="VLJ17_11245"
                     /inference="COORDINATES: protein motif:HMM:NF013767.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HSV23592.1"
                     /translation="MADLAPGGDEYAQFRITFFEECTELLADLEQRLDQMQSNVAQAE
                     ELNAVFRAVHSIKAGAGAFKFVQLVEFCHSFEAVLDKLRSGRIAQDDRISAVLVRASD
                     VLAALVEAAQANRTVA"
     gene            complement(372..743)
                     /locus_tag="VLJ17_11250"
     CDS             complement(372..743)
                     /locus_tag="VLJ17_11250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008960136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV23593.1"
                     /translation="MARRVLTVDDSKTIREMVGFTLKNAGFEVFEAEDGVRALSLLAG
                     TSVDLVITDVNMPNMDGVTLVKELRARAPFKSLPILVLTTEGGEDKKAEGRAAGATGW
                     IVKPFAPDKLLQVVNKVCPSH"
     gene            complement(744..1046)
                     /locus_tag="VLJ17_11255"
     CDS             complement(744..1046)
                     /locus_tag="VLJ17_11255"
                     /inference="COORDINATES: protein motif:HMM:NF024857.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HSV23594.1"
                     /translation="MVTDTSLPPDAIVLPSVLDLAAAQALKISLCEHFLCRTQVVLNG
                     RNVERVGTPVLQVLLAASRSVASDGGSFKLLQPSHALRSALCDLGLSGELARWETQ"
     gene            1275..2117
                     /locus_tag="VLJ17_11260"
     CDS             1275..2117
                     /locus_tag="VLJ17_11260"
                     /inference="COORDINATES: protein motif:HMM:NF020704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division plane positioning ATPase MipZ"
                     /protein_id="HSV23595.1"
                     /translation="MMTSHAAHVIVIGNEKGGAGKSTIALHLAIGLMQLGFKVVVADF
                     DIRRRSLHRYLDNRRAHNNSAATSSLLCPTIYELPESFAEPNFADGRLDQIEGDLRSI
                     SRKADFLIVDTPGSVTEISKLAHSFADTVITPMNDSLMDLDVLARIAPGQTTLSGPSH
                     YSLLMLELKRRRLREYGSGIEWIILRNRLAPIASANNLRVGRLLDALAPKLGFRVAPG
                     FAERVIYRELFSTGATVLDPIELVAGLRPTMSHLSARMEVRRLLEALWLPKVTERATA
                     TAYS"
     gene            complement(2148..2666)
                     /locus_tag="VLJ17_11265"
     CDS             complement(2148..2666)
                     /locus_tag="VLJ17_11265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1465 family protein"
                     /protein_id="HSV23596.1"
                     /translation="MSDRVIDGLQPVSFGERLAASQNFSQLFRDGMKLVEETAAYLDG
                     PGRQESKLLDRATSLSYATESMRLTTRLMQLASWLLLHRAVNEGEMSLAQANKERIRV
                     KLSTEERPEDAPIALPVRLNELIARSKKLQDQVRRLDATIHAPTPSVPAGNNPFEDQL
                     GMLRAAFERRQL"
     gene            complement(3025..3219)
                     /locus_tag="VLJ17_11270"
     CDS             complement(3025..3219)
                     /locus_tag="VLJ17_11270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011084320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1192 domain-containing protein"
                     /protein_id="HSV23597.1"
                     /translation="MATIEEDDRPKKKPVHELGQDLALLSVEELNDRILLLNDEITRL
                     ENALARKRASRSAADQFFKR"
     gene            3367..4365
                     /locus_tag="VLJ17_11275"
     CDS             3367..4365
                     /locus_tag="VLJ17_11275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-quinone oxidoreductase"
                     /protein_id="HSV23598.1"
                     /translation="MTSIPATMTAIGITAPGGPEMLASQERPVPQPGDGEILVKVVAA
                     GVNRPDVAQRKGLYPPPPGVTDIPGLEIAGVVAACGPGCRRWKPGDQVTALVSGGGYA
                     QYCTAHETHALPVPSGLTATEAAAIPETFFTVWHNVFERGGLKASETLLVHGGSSGIG
                     TVAIQLAKAFGARVIATAGSAEKCDACRRLGADVAINYRAEDFVALTKSATGGAGAQV
                     ILDMVGGDYIERNYEAAAVEGRIVQIAFQGSPRANVDFRRIMLKRLHHTGSTLRSRSV
                     PDKASIAQAVELNVWPLIAAGKVRPVMDEIFPFGEAAKAHARMESSVHIGKIVLGM"
     gene            4538..7402
                     /locus_tag="VLJ17_11280"
     CDS             4538..7402
                     /locus_tag="VLJ17_11280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HSV23599.1"
                     /translation="MHVALAAAVSIASLIASPVHAVEAVNVRVDIAAIDLTDVVELLK
                     SEGGRVQVSTAPGSDGIVRRMEVPAREAGTDWAMIALANSSDEQIDRLIVVPHYQMVG
                     SKILWPDLGLSRVVNITPSAGDRPDRQDSATADIFRITLDPGTVVTYIVELRTDKLPQ
                     IYLWEPDTYKDKVNSFTLYHGIVIGIAGLLALFLTILFVVKGSFMFPAAAALGWAVLV
                     YIGVDFGFWGKVFDMSAGAERIWRASGEAILAATLLVFLFAYLNLNRWHVRYAHIAIA
                     WLAFLGALVAVALVDPSIASGIARLSLLFVAVGGFGVIIYLAAQGFDRAVLLIPTWFL
                     LVSWVIAAGLAVGGWVTNDIVAPALLGGLVLIVMLIGFTVMQHAFAGGITQGVVTDVE
                     RRALALTGAGDLIWDWDVSADKVFTSPETEALLGLTRGALDGPAAQWIEVVHPHDRDR
                     FRAALDSVIQRGRGRVVQDFRLRTPDGNSLWFTMKARPLVGSDGEVIRLVGTLTDVSE
                     AKIAEERLLHDAVHDHLTGLPNRQLFVDRLDSLLAFANSNPDCRPTVMVMDLDRFKQV
                     NDSVGMAVGDSILLTIARRLGRLLKPQDTLARLSGDQFGLILTSEKDPNRVIAFAESA
                     CKVVRAPITFNEREMILTMSLGVALSDAQPNQADDLLKNAELAMYAAKSARGDCVEVF
                     KPAMRVRKTDRLTLESELRRALDREEITLLYQPIVRLENRTVAGFEALARWDHPKMGR
                     LSPIEFITIAEEIGLITDLGLFAVERAARQLATWQRIVRSRVPLFASVNMSSRQLLKN
                     DVVDNLRAVFAHLGLARGTLKLELTESAVMENPEQAAQILKRLRDLGAGLALDDFGTG
                     HSSLGYLQRFPFDTIKIDQSFVRANAKGTRPVILRSIVGLAHDLGMDVVAEGAESDSD
                     ATALHRLGCEFAQGFAFGHPMSADQAQELLLGKRLETVNR"
     gene            complement(7485..>7718)
                     /locus_tag="VLJ17_11285"
     CDS             complement(7485..>7718)
                     /locus_tag="VLJ17_11285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018646661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HSV23600.1"
                     /translation="VLKAIAKGSGPGNALLALGYAGWAPGQLETEIQDNGWLHCSADA
                     DLIFGSDVGSKYDRALKKLGIHAGMLSSEAGHA"
BASE COUNT         1545 a         2313 c         2268 g         1592 t
ORIGIN      
        1 cgcaacggta cgatttgctt gcgccgcctc aaccagcgcc gccaacacat cgctggcgcg
       61 aaccaggacc gcggaaatcc tatcgtcctg ggcgatgcgg ccgcttctca acttgtcgag
      121 taccgcctca aacgaatggc agaattccac gagctggaca aacttgaatg caccagcccc
      181 cgctttgatc gagtggacgg cccgaaatac cgcgttcaac tcctcggctt gggcaacgtt
      241 cgactgcatt tgatcaaggc gctgctccaa gtccgccaac agctccgtgc attcctcgaa
      301 gaatgtgatg cggaactgcg cgtattcgtc accgccgggg gcgaggtcgg ccatgaagtc
      361 cggatccaga tctaatggga gggacaaacc ttgttcacga cttgaagcag cttatcgggg
      421 gcaaagggct tgacgatcca accggtggcg cccgccgccc gaccctcagc cttcttgtcc
      481 tcgcctccct ccgtcgtcag caccaaaatg ggcaacgact tgaagggggc acgggcacgc
      541 aactccttca caagggtgac gccatccatg ttcggcatgt tgacgtcggt aatgacgagg
      601 tcgacgctcg tccctgcgag cagcgacaat gcccgaacgc catcctcggc ttcgaatacc
      661 tcaaaccccg cgttcttcag cgtgaatccg accatctcgc ggatcgtctt cgaatcgtcg
      721 accgtgagaa cccgtctggc catttattgg gtttcccatc gggctaattc gccggacaag
      781 ccgagatcgc aaagggcgga acgcaaagcg tgagagggct gcaacagctt gaagcttccg
      841 ccgtcgctgg cgacggagcg agatgcagca aggagaactt gcagcacagg tgtaccgaca
      901 cgttcgacgt tcctgccatt gagaacgacc tgcgtgcggc acagaaagtg ttcgcagaga
      961 cttatcttca gcgcctgggc agcagccaaa tccagaaccg atggcagcac aatggcatca
     1021 ggaggtagcg aagtatccgt gaccacggtg cattctcttt aacaggcccg agttggcagc
     1081 ctcttcgaca ggccccttgg cggtaacgat cgaacggtgg agacatcccc tcgatcccgc
     1141 gccttgatta tcgctatgcc gccttagtta atccgcatcg gttaagaatg ccctaatact
     1201 gaccaatgtg ttgcggatct gttgcctata accttcgagt aaaatcgacg cgcaagagct
     1261 ggacagacga tctgatgatg acctcgcatg cggcccatgt gatcgtgatt ggaaatgaga
     1321 agggaggagc gggaaaatcc acgatcgccc tccatctcgc cattggtttg atgcaactcg
     1381 gtttcaaagt cgtggttgcg gattttgaca tccgccggag gtctctgcac cgctatttgg
     1441 ataatcgccg agcccacaac aatagcgcag caaccagctc attgttgtgt ccaacgatct
     1501 acgaattgcc ggaaagcttt gctgagccga attttgccga cggccgtctc gaccaaatcg
     1561 aaggcgacct gcgctccatc agccgcaagg ccgacttcct gatcgtcgac acaccgggct
     1621 cggtcaccga aatttcgaag ctcgctcaca gctttgccga cactgtcatt acgccgatga
     1681 atgatagtct catggatctc gacgtattgg cgcgcatcgc tccggggcag acgacccttt
     1741 caggccccag tcattacagc cttctgatgc ttgaactaaa acgtcgacgc ttgagggagt
     1801 atggctcggg gatcgaatgg attatcctaa gaaatcgcct cgctccgatc gcgtcggcca
     1861 ataacctacg cgtcggacgg cttcttgatg cgctggcgcc aaaattagga tttcgcgtcg
     1921 cgccaggctt tgccgagcgg gtgatttacc gcgaactgtt ctcgaccggc gccactgtgc
     1981 ttgatccgat cgagcttgtt gccggtcttc gccccaccat gtcccatctc tccgcccgca
     2041 tggaggtgcg gcggttgctg gaagcacttt ggctcccgaa agtgacggaa cgcgcaaccg
     2101 cgacggcata ttcgtaaccg ggaatgcgtt tgttgcggaa gcggtcgcta tagctgacga
     2161 cgctcgaagg cagcgcgcaa cattccgagt tggtcttcaa acggattgtt gccggcgggc
     2221 acgctcggag tcggagcatg aatggtggca tcgagacgcc ggacttgatc ctgcagtttt
     2281 ttcgaccgcg caatcagctc attgagccgc accggcagag cgatgggcgc gtcttccgga
     2341 cgctcctcgg tggacagctt gaccctgatg cgctctttat tggcctgggc aagcgacatc
     2401 tcgccctcat taacggcgcg atggaggagg agccaggagg caagctgcat aaggcgggtg
     2461 gtaagccgca tgctttcggt cgcataagag agcgatgtag ctcgatcgag cagcttggat
     2521 tcctgacggc cggggccgtc gaggtaggcc gccgtctcct ccacgagctt catgccgtcg
     2581 cgaaatagtt gagaaaaatt ctgcgacgcc gcaagccgct cgccaaacga aaccggctgc
     2641 agcccatcaa tcacacggtc agacatgttt acgcctcaca accgcaaaag catgccttcg
     2701 gatggtgtcg ttgtccagct gtgatggcaa atctttaaga gatggtttcc ggcgcgctct
     2761 caaggcgatc tatcttttcc gagttcgcca aaaaaagagc cgcctgatga ggcggctcaa
     2821 gtgacaacag ggaggcgtca aacagagtgg acaggagcca ctcggtgtcc acagaatgga
     2881 caaccaacgt aatgtaggaa aaaccttaat agctcgtaaa cttcgaccct ttttttgaga
     2941 aatttaaccg atgcgacgcc gcgcagcacc agaaagactg attttagcca caatttgcca
     3001 cccgtaactc gcgtgaaaga tgcatcagcg tttgaaaaat tgatcggcgg ccgaacgcga
     3061 agcgcgcttt ctcgccagcg cgttctcaag gcgggttatt tcgtcattca gcagcaaaat
     3121 gcgatcgttg agctcttcga ccgacaacag cgccaagtcc tgcccgagct cgtggacagg
     3181 cttttttttg ggccgatcat cctcttcgat tgtcgccatt ttccgctcca taggtgcgtg
     3241 aacatagctg tgcgaccgcg atttgtcagg gcctgtgttc cggcccaatg ttgtgtcgcg
     3301 gttgtcacag ccggcaggaa accagtaaac aggctcgctt gatttccccc aaccgatcag
     3361 ggacccatga catcgatccc cgccaccatg actgcaatcg gcatcacggc tccgggcggg
     3421 cccgagatgc tggcgtcgca agaacgcccg gtgccacagc ctggcgacgg cgaaattctc
     3481 gttaaggtcg ttgccgcagg cgtgaaccgt cctgacgttg ctcagcgcaa ggggctctac
     3541 cctcctccgc cgggagttac cgatataccg gggctcgaaa ttgccggtgt tgttgcggcg
     3601 tgcggtcccg gctgtcggcg ctggaaaccc ggcgatcagg ttacggcttt ggtcagcggt
     3661 ggcggctatg cgcaatactg caccgcccat gaaacccacg cactgccggt tccgagcggg
     3721 ctgaccgcca ccgaagctgc ggcaattccg gagacgttct tcaccgtctg gcacaacgtg
     3781 ttcgaacgcg gcggcctcaa agccagtgag acgctgttag tgcacggtgg cagttcgggc
     3841 atcgggaccg tggcgatcca actcgctaag gcgttcggcg cacgcgtcat tgcgacggcc
     3901 ggaagcgccg aaaaatgcga cgcctgccgt cgcctcggcg ccgatgtagc catcaactac
     3961 agggccgagg atttcgttgc actcacaaaa agcgcaaccg gtggcgccgg ggcgcaagtg
     4021 atcctcgata tggtgggggg cgactatatc gaacgcaact acgaggcagc ggccgtcgag
     4081 gggcgcattg tgcagattgc atttcaaggt tcgccgcgtg ccaacgtcga tttccgccgc
     4141 atcatgctca agcgactgca tcacaccggc tcgacactgc gctcgcgctc ggtacccgat
     4201 aaggcatcga tcgcccaagc ggtcgagctc aatgtttggc cgctaatcgc cgccggcaag
     4261 gtgcgcccgg tgatggacga aatcttcccg tttggggaag ccgccaaggc ccatgcacgg
     4321 atggaatcga gcgtccatat cggcaagatc gtgctcggca tgtgagcaac atcgacgcgc
     4381 catttcgctg ccgcggtggc atgatgccgc gtgtcaggga aatgcactct aaagacgtga
     4441 gattcttgcg cttatccgct tagtccggta ctcagggagc ccgggctgga cagcgacgta
     4501 tgaggcaata ggcacggagg attgccgctt gaaggttctg cacgtcgcat tggcggcggc
     4561 cgtctcgatc gcgtcgttga ttgcgtctcc ggtccacgcc gtcgaggccg tcaatgtacg
     4621 cgtcgacatt gcggcaatcg atcttaccga cgtggtggag cttttgaaga gcgaaggcgg
     4681 tcgcgtccag gtctctaccg cgccgggtag cgacggaatc gtgcgccgca tggaagttcc
     4741 ggcccgcgag gcgggtaccg attgggccat gatcgcattg gcaaattcga gcgacgaaca
     4801 gatcgatcgc ctcatcgtgg ttccgcacta ccagatggtg ggctcgaaga ttctatggcc
     4861 ggatcttggg ctctctcgtg tcgtcaacat cacgccgagc gctggcgacc ggcccgaccg
     4921 ccaggacagc gctacagccg acattttccg catcaccctc gaccccggga ccgtggttac
     4981 ctacatcgtg gagcttcgca ccgacaagtt gccacagatc tacctttggg agccagacac
     5041 atacaaagac aaagtcaaca gcttcacgct ctaccatggg attgtgatcg gcattgcggg
     5101 cctacttgcg ctgttcctga ccatcctgtt cgtcgtcaaa ggcagcttca tgttccctgc
     5161 ggccgccgcg ctcggttggg cggtgcttgt ttacatcggg gtggatttcg gattctgggg
     5221 caaggtgttt gacatgtcgg ccggcgccga gcggatatgg cgtgcatccg gcgaggcgat
     5281 ccttgcggca acgcttctcg tgttcctgtt cgcctacctc aatctcaatc gctggcacgt
     5341 acgctacgcc catatcgcga ttgcatggct tgccttcctg ggcgcgctcg tcgcggtggc
     5401 gctggtcgat ccgtcgatcg cctccggcat tgcgcggctg tcccttttgt tcgtggccgt
     5461 cggggggttc ggcgtcatca tctatctggc ggcccaagga ttcgaccgcg ccgttttgtt
     5521 gattccgacc tggttcctgc tggtgtcttg ggttattgcg gctggacttg cggtcggcgg
     5581 atgggtgact aacgacatcg tggcgcctgc gctgctgggc ggtctggtgc tgatcgtcat
     5641 gctgatcgga tttaccgtca tgcaacacgc ttttgcaggc ggcatcacgc agggcgtcgt
     5701 cacggacgtc gagcgccgtg cgctggcgct cacgggcgcg ggcgatttga tctgggattg
     5761 ggacgtatca gccgataagg tatttacgag tccggaaacc gaagccctgc tcggccttac
     5821 gcgcggcgca ttggacggcc ctgcagcgca atggatcgag gtggtgcacc cgcacgaccg
     5881 cgaccgtttc cgtgcggcgc tcgacagcgt gatccaacgc gggcgcggcc gcgttgtgca
     5941 ggatttccgc ctgcgtaccc ccgacggaaa ttcgctatgg ttcaccatga aggcacggcc
     6001 gttggtgggc tccgacggcg aggtgatccg gctggtcggc accttgacgg acgtcagtga
     6061 ggccaagatc gcggaggaac gcctactcca tgacgccgtt catgaccatt tgaccggact
     6121 gccgaaccgg cagctttttg ttgaccggct cgactccctt ttggcgtttg ccaacagcaa
     6181 cccagattgc cggccgaccg tcatggtgat ggacctcgat cgctttaagc aggtcaacga
     6241 ttccgtcggc atggcggtcg gagattcgat tttgctgacg atcgcgcgcc gactcggccg
     6301 cctgctcaaa ccgcaagaca cgctggctcg gctgtcgggc gaccagttcg ggctcatctt
     6361 gacatcggag aaggacccga accgtgtcat tgcgttcgcg gaatccgcct gcaaggtagt
     6421 ccgagcacca atcaccttca acgaacgaga aatgattctc accatgtccc tcggtgttgc
     6481 gttgtccgat gcacaaccca atcaggcaga tgacctgctt aagaatgccg aacttgccat
     6541 gtatgcggcc aagagcgcac gcggcgactg cgtcgaagtg ttcaagccgg ccatgcgggt
     6601 gcgaaagacg gatcggttga ctctcgaatc cgagctgcgc cgcgcgctgg accgagagga
     6661 gatcacgcta ctctaccaac cgatcgtgcg gcttgaaaat cgcacggtgg cgggcttcga
     6721 ggcgctggcg cgctgggacc atccgaaaat gggccgactt tcgcctatcg aattcattac
     6781 gatcgcggag gaaatcggtc tcatcaccga tctggggctg ttcgcggtcg aacgcgccgc
     6841 acgccaactc gcaacctggc aacgtatcgt gcgcagccgc gtgccgcttt tcgcgagtgt
     6901 caatatgtcc tcgcgacaat tacttaaaaa cgatgtggtt gacaatctgc gcgccgtgtt
     6961 cgcgcacctg ggcctggcac gcggcacact caagctcgag ctcaccgagt ccgccgttat
     7021 ggaaaatccc gaacaggcgg ctcaaatcct caagcggttg cgggatctcg gcgccggcct
     7081 cgcgctcgat gatttcggca ccggacattc ctcactggga tatctgcaac gcttcccatt
     7141 tgataccatc aagatcgacc aatcatttgt gcgcgccaac gccaagggaa cgcggcctgt
     7201 catcctgcgc tcgatcgtcg gacttgccca tgatctcggc atggacgtcg tcgccgaagg
     7261 agcggaaagc gattccgacg ccacggcgct ccatcgtctt ggctgcgagt ttgcccaagg
     7321 tttcgcattc gggcatccga tgtcagccga tcaggcgcaa gaattgctcc tgggaaaacg
     7381 cctggagacg gtgaacagat gacaaatgtc ggaggtggag atgtcggagg tgacatgaca
     7441 gcgccgctgg cccctgtcat ctgacctgca tcatctatcc tctatcacgc gtgtccagct
     7501 tcgctggaca gcatgccggc atgaatgccg agcttcttga gcgcccgatc atatttggag
     7561 ccaacgtcgg agccgaagat aaggtcggcg tcggcgctgc aatgcagcca cccattgtcc
     7621 tggatctccg tctccagctg ccccggcgcc caccccgcat agccaagcgc caacagagca
     7681 tttccgggac cgctcccttt cgcgattgcc ttgagaac
//
LOCUS       DATILV010000497         1815 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1908764, whole genome shotgun sequence.
ACCESSION   DATILV010000497 DATILV010000000
VERSION     DATILV010000497.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1815)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1815)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1815
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1908764"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(185..1624)
                     /locus_tag="VLJ17_11290"
     CDS             complement(185..1624)
                     /locus_tag="VLJ17_11290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_023098450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1182 family transposase"
                     /protein_id="HSV23601.1"
                     /translation="MRRFVEGTDRGQSTLFPECLEDWIDEDNSVRVIDVFVEELDLGE
                     LGFSGVDPEATGRPSYHPSVLLKLYIYGYLNRVQSSRRLEREAARNVEVMWLTGRLVP
                     DHKTIADFRKDNGTAIRKVCARFIALCRMIGLLTQPSVAIDGSKFKAVNNRDKNFTRA
                     KMERRMAQIEESVARYLEQLDTADRQEPSEALTTKTNRLKEKIETLKEQMRRLELLKV
                     EMLAAPDQQISLTDPDARSMATSGRGSGIVGYNVQIAVETNHHLIVMHEVTNDGTDRS
                     QLSHVANETKTALGVEKLDAVADRGYFNSEEILACEEAGITVTLPKPMTSNAKAEGRF
                     GKQDFRYVADEDVYLCPASEKLAYSFTTQDKGMVLRRYRTTACHSCAIKNSCTKGKER
                     LISRWEHEHILEAVQRRLDEHPEKMRQRRETVEHPFGTIKARMGATHFLMKTLPRVAS
                     EMALHVLAYNLTRVMNIIGIQPLITAMRA"
BASE COUNT          342 a          537 c          536 g          400 t
ORIGIN      
        1 tgtgtgcggc tgctattcgt ctttggaagg ggggataaca cctccgtacg gcggaagact
       61 gctgcgctgc gggatttcga tccgatccat gaccgctatg ggtcttggtt gtgtagaaac
      121 gcccagggag aggcgacaca aggtcgtcga agttggcgag gcgcgttgat tttccggatt
      181 gatactatgc cctcatcgcg gtgatgagtg gctggatgcc gatgatgttc atgacgcggg
      241 tgagattgta ggcgagtacg tgtagcgcca tctcgctggc gacccgtggc agtgtcttca
      301 tgaggaagtg ggtggccccc atccgagcct tgatcgtgcc gaagggatgc tcgaccgtct
      361 cgcgccgctg acgcatcttc tccggatgct catcaagccg gcgttgcaca gcctcgagaa
      421 tatgctcatg ctcccatcgt gagatcagtc gctccttgcc cttggtgcaa ctgttcttga
      481 ttgcacagct atgacaggcg gtggtccggt agcgacgcag gaccatgcct ttgtcctggg
      541 ttgtaaagga ataggcgagc ttctcgcttg caggacaaag gtaaacgtcc tcatcagcca
      601 catagcggaa gtcctgcttg ccgaagcgtc cttccgcctt tgcgttcgag gtcatcggct
      661 ttggcagcgt aaccgtgatg ccagcctcct cgcatgccag gatctcttcg ctgttgaagt
      721 aaccgcggtc ggcgacggca tcgagcttct ccacgcccag cgccgtcttg gtctcgttgg
      781 ccacatggga gagttgcgat cggtcggttc cgtcgttggt tacctcatgc atgacgatca
      841 gatgatggtt ggtctcgacg gcaatctgga cgttgtagcc gacgatgccg gaaccgcggc
      901 cgctggtcgc catcgaacgg gcatcgggat cggtcagcga gatctgctgg tctggggcag
      961 cgagcatctc caccttgaga agctcgagac gccgcatctg ctccttgagc gtctcgatct
     1021 tctctttgag gcggttcgtc ttggttgtga gggcctctga cggttcctgc cggtcggcag
     1081 tgtcgagctg ctcaagatag cgcgcgacgc tctcctcgat ctgcgccatc cgccgctcca
     1141 tcttggcgcg cgtgaagttc ttgtcgcggt tattcaccgc cttgaacttg ctgccgtcga
     1201 tcgcgacgct gggttgcgtg agtaggccaa tcatgcggca cagcgcaatg aagcgtgcgc
     1261 acaccttgcg gatggcagtg ccattgtcct tgcggaaatc ggcaatcgtc ttgtgatccg
     1321 gtacaagccg gcccgtcagc cacatcacct caacgttgcg cgcagcctca cgctcgagcc
     1381 gtcgactcga ctgaacccga ttgagatagc cgtaaatgta gagcttcagc agaaccgacg
     1441 gatgatatga aggccgaccg gttgcttccg gatcgacccc actaaagcca agctcgccca
     1501 gatcgagttc ctcaacaaaa acgtcgatca cgcgaacgga attgtcctca tcgatccagt
     1561 cttccaagca ttccggaaac agcgtgctct gcccacgatc cgtgccctca acgaagcgcc
     1621 tcatccgatc cctccgcaaa tcgcgtagga atcatatcgc gagaatcaga tgaaccgccg
     1681 cgttttcaca caaccagggt cataagcgga catcgccgac gaggcggcta ctgtgccgct
     1741 tcggccctac cgaaataggc tgcctcgagg tctgaatcct gcaccagcgc ggaggcgtca
     1801 cccgcgcgca cgacg
//
LOCUS       DATILV010000498         4835 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3695731, whole genome shotgun sequence.
ACCESSION   DATILV010000498 DATILV010000000
VERSION     DATILV010000498.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4835)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4835)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4835
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3695731"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..189)
                     /locus_tag="VLJ17_11295"
     CDS             complement(<1..189)
                     /locus_tag="VLJ17_11295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23602.1"
                     /translation="MGNPSAIRVHLVLFAIGAGAAVSGLPGARAAEYTLVPSPQTVHI
                     GYFNAALKPVLTIDSGDTV"
     gene            complement(273..1262)
                     /locus_tag="VLJ17_11300"
     CDS             complement(273..1262)
                     /locus_tag="VLJ17_11300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018316020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV23603.1"
                     /translation="MKRRDLLACFAAVLCAGASMLRPVLAQAKYPDRPIKLVVPFVPG
                     GVNDAVARLWADRVKASLGAVFIENQGGAGGAVGGAAVAHAQPDGYTILLGGAGSQVL
                     NPIGMSKPLYDPIKDFEPIAILATTSLTIAVTPSLPVYKLKELIAYAKANPGKLVYGS
                     AGTGSMTHLAGELFKSLAATPDIVHVPYKGSGASLTDVISGQVPMIVANITGQVLELH
                     KSGKLRMIAVTGPERLATDPEIPTASESGLPGLVSVNFTGLFAPAKTPKPIIEQIAAA
                     TASVMASEEVRKNLIEQGLEPYRDSTPEKTRRFVEEDIARWTPVFRAIGLKLN"
     gene            complement(1448..3484)
                     /gene="parE"
                     /locus_tag="VLJ17_11305"
     CDS             complement(1448..3484)
                     /gene="parE"
                     /locus_tag="VLJ17_11305"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009340 - DNA topoisomerase IV complex
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HSV23604.1"
                     /translation="MAKTAKKQSSSPSDLFAAAPRREATKTRSGNGEDYTAHDIEVLE
                     GLEPVRRRPGMYIGGTDEKALHHLFAEAIDNAMDEALAGHASFIEVELTGNGYLTVTD
                     NGRGIPVDPHPKFPKKSALEVIMCTLHAGGKFDSKVYETSGGLHGVGISVVNALSERL
                     EVEVARGGQLYRQVYQRGKPKNGLEQLGRTPNRRGTKVRFKPDAEIFGAKVKFNPLRL
                     FKMARAKAYLFGGVEIRWHCDKELLHGSPEVPENETFHFPDGLKDYLAVTVAGQTLVH
                     PDIFTGKSGRPGANGSVEWAVAWAADADGFLSSYCNTIPTADGGTHESGLRAALSRAL
                     KDHAERVNLGKRAAQVTSEDVMAGATAMLSVFIREPEFQGQTKDRLATAEATRIVESA
                     VKDQFDHWLAGNPVQANKLLDFVVERAEERIRRRQEKEISRKSAVRKLRLPGKLADCT
                     NTAADGSEIFIVEGDSAGGSAKQARNRLSQAVLPLRGKILNVASAGRDKLAQNQQLAD
                     LAQALGCGTGAHYRDEDLRYGKVIVMTDADVDGAHIASLLITFFYRQMPQLIDHGHLY
                     LAVPPLYRLAHGGKLFYARDDKHKDEIMRSEFRANANVEISRFKGLGEMMPAQLKETT
                     MDPAKRTLLKVMLVADDRADTAKSVERLMGTKAEARFEFIQERAEFASDEMLDV"
     gene            3865..4407
                     /locus_tag="VLJ17_11310"
     CDS             3865..4407
                     /locus_tag="VLJ17_11310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HSV23605.1"
                     /translation="MSLEDQVHAVSQQVVEFVRTHEAWAAPIIGVLAFGESLAFISLL
                     LPAWAMLVALGALIGHSGISFWPIWLAGAVGAALGDWLSYWVGIKLGPAVAHVWPLSR
                     HPGLLPRGEAFVSKWGALGIFIGRFSGPLRATVPLVAGIFAMPFWRFQTANFVSAFVW
                     VAVLLTLGDVTQAIFKLIWP"
     gene            4447..>4835
                     /locus_tag="VLJ17_11315"
     CDS             4447..>4835
                     /locus_tag="VLJ17_11315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSV23606.1"
                     /translation="MTILTRRTLLAGAAVAGASAGLGWWNSQSARAAATPAAGKQAAS
                     FYRYKVGTIEVTVVSDGVNRFPIPDGFILNAKKEEINAALQAAFMEKDFFTGPYNPIV
                     LNTGTKLVLVDMGLGEAAYNSSKGMNG"
BASE COUNT          857 a         1485 c         1513 g          980 t
ORIGIN      
        1 gacggtgtcg ccggaatcga tggtcaatac gggtttcagc gcggcgttga aatagccgat
       61 gtgcacggtt tgcggactgg gcaccaacgt gtactcggcc gcacgcgcgc cgggcaatcc
      121 gctgaccgcg gcgcccgcgc ctatagcgaa cagtacaaga tggacgcgaa tggctgatgg
      181 atttcccatg ttcatggctc ctgagggcgg gttcgtttaa cccaccaatt gattgcgcag
      241 aacggcgggt acgaacccgc cctcaggagc catcaattca gcttcagccc gatcgcacga
      301 aacacaggcg tccagcgcgc gatgtcttcc tcgacaaagc gtcgggtttt ttccggagtg
      361 gaatcccgat acggctcgag gccttgttcg attagatttt tgcgcacctc ctcgcttgcc
      421 atcacagaag cagtcgcagc ggcaatctgc tcgatgatcg gcttcggcgt cttggcgggt
      481 gcgaacaggc cggtgaagtt gaccgaaacc aggcccggca gtccggattc gctcgcggtc
      541 ggaatttccg ggtccgttgc cagacgttcc ggtccggtca cggcgatcat gcgcagcttg
      601 ccagacttgt gaagttccag cacctgaccg gtgatattgg cgacgatcat cggcacttgg
      661 ccgctgatca catcggtgag ggaagctccg gagcctttgt aggggacatg cacgatatcg
      721 ggcgtggcag ccaacgactt gaacaattcc ccggcgaggt gtgtcatcga tccggtgccg
      781 gcggacccgt agacgagttt accgggattg gcttttgcat aagcgatgag ttccttgagc
      841 ttatacaccg gcagcgatgg cgtcaccgca atggtcagcg atgtcgttgc cagaatcgcg
      901 atcggctcga aatccttaat cggatcgtag agcggcttcg acatgccgat cggattgagc
      961 acttgggagc cggcaccgcc gagcaggatc gtgtatccat ccggttgcgc atgggcgacc
     1021 gcggcacccc caaccgcccc gccggcgccg ccctggttct cgatgaagac ggcgcctaac
     1081 gacgctttca cccggtcggc ccacagacgt gccaccgcgt cattgacacc gcccgggacg
     1141 aacgggacga caagcttgat cggccggtcg ggatatttgg cttgcgcgag aacagggcgc
     1201 agcatcgagg cgccggcgca cagtacggct gcgaaacagg ccaacaggtc gcgacgcttc
     1261 atagggtcgt tcctcgatcg atcttgccga ttgcggtcgt cggcgctgag aaactgatgg
     1321 ttgtcgagcc caacgggcag gatgcgccat tccttcgatc gcggcaagca tacagccgct
     1381 ctcagctctg cccgcagagg ccctgctcgg agagcggcac cagcgtctta gttcaacccg
     1441 tcagccttca cacatccagc atctcatcgc tcgcgaactc cgcgcgctcc tggatgaact
     1501 cgaaccgcgc ctccgccttg gtacccatca gccgttccac cgatttcgcg gtgtcggcgc
     1561 ggtcgtcggc gaccagcatc accttcaata gcgtacgctt ggccgggtcc atggtggttt
     1621 ccttgagctg tgccggcatc atctcgccaa ggcccttgaa gcggctgatt tccacattgg
     1681 cgttggcacg gaactcgctc cgcatgatct cgtccttgtg cttgtcgtcg cgggcgtaga
     1741 acaacttgcc gccatgcgcg agccggtaga gcggcggcac cgcgagatag aggtggccgt
     1801 ggtcgatgag ctgcggcatc tggcggtaga agaaggtaat gagcagcgat gcgatatggg
     1861 cgccgtcgac gtccgcatcg gtcatcacga tcaccttgcc gtagcgcagg tcttcgtcgc
     1921 gataatgcgc gccggtgccg cagccgagcg cctgggcgag gtccgcaagt tgctggttct
     1981 gggctagctt gtcgcggccg gcgcttgcta cgttgaggat cttgccgcgc agcggcagca
     2041 ccgcttggct taagcggttg cgcgcctgct tggcagagcc accagccgaa tcgccctcga
     2101 caatgaagat ttccgagccg tcggccgccg tgttggtgca gtcggcgagc ttgccgggca
     2161 ggcgcagctt gcgcaccgcg ctcttgcgcg agatttcctt ctcctgacgg cggcgaatgc
     2221 gttcctcggc acgctccacc acgaaatcga ggagcttgtt cgcttgcacc ggattgccgg
     2281 caagccagtg atcgaactgg tccttgacgg cgctctcaac gatgcgcgtg gcttccgcgg
     2341 tggcgagccg gtccttggtc tggccctgga actcgggctc gcggatgaac accgagagca
     2401 tcgcggtagc gccggccatc acgtcctcgc tcgtcacctg ggcggcgcgc ttgcccaggt
     2461 tgacgcgctc ggcatgatcc ttgagggcac gcgataaagc tgccctgagg ccggactcat
     2521 gagtgccgcc gtcggccgtg ggaatggtgt tgcaatagga cgacaggaac ccgtctgcat
     2581 cggcggccca ggccaccgcc cattcgaccg acccgttggc gcccgggcgg ccggatttgc
     2641 cggtgaagat gtcggggtgg accagcgtct gaccggcgac cgtgaccgcc agatagtcct
     2701 tgaggccgtc ggggaagtgg aaggtctcgt tttcaggcac ttccggactg ccatgcagga
     2761 gttctttgtc gcaatgccag cggatttcga cgccgccgaa cagatacgcc ttggcgcgcg
     2821 ccatcttgaa caggcgtagc ggattgaatt tcaccttggc gccgaagatc tcggcatcgg
     2881 gcttgaatcg cactttggtg ccgcgccggt tcggcgtgcg gccgagctgt tcgagcccgt
     2941 tcttcggctt gccgcgttga taaacctgcc gataaagctg accaccgcgc gcgacctcga
     3001 cttcgagccg ttcggagagg gcgttgacca ccgaaatccc gacgccgtgc aggcctccgg
     3061 aggtctcata gaccttggag tcgaacttgc cgcccgcatg gagcgtgcac atgatcactt
     3121 cgagcgccga tttcttggga aatttcggat gcggatcgac cggaatccca cgcccattgt
     3181 cggtcacggt caggtagccg ttgccggtca actcgacctc gatgaagctt gcatggccgg
     3241 caagtgcttc gtccatggcg ttgtcgatgg cctcggcgaa caggtgatgt agcgcctttt
     3301 catcggtgcc cccgatatac atgccaggac ggcgccgcac cggctctagc ccctcaagga
     3361 cctcgatgtc gtgggcggtg tagtcctcgc cgttgcccga gcgggttttc gtggcttcgc
     3421 gacgcggcgc cgccgcgaac aggtcggacg gtgaggagga ctgcttcttt gcggtcttag
     3481 ccatgcgatt ccgtttgtgg tcgtaggtac tgatcagcgt agcttaggac tagaaattgt
     3541 taccaaaaca ataagttaat atggcgtctt gatgttccaa gagagacatt gctcggtgcg
     3601 aatcaattgg ctccagtatg acatgcctag gccgcgaaca agatcaaaac gactggcccc
     3661 gtactggccc cgttgccccc tgaacagctc acccgggaat gcggcgaggg gctggcgcag
     3721 cagggcgcgg ttcggtaaac gactcagagc catccttgaa aggttcccaa tacgtcgccc
     3781 ggattgagcg cagcgaaatc tgggttgggc catatcgaaa agccgccccg gattcgctgc
     3841 gcgcagtctc ggctacggat tcccatgtcg ctcgaagacc aggttcacgc cgtctcccag
     3901 caagtcgtcg aattcgtgcg gactcacgag gcgtgggcgg caccgatcat cggcgtcctc
     3961 gcctttgggg aatcgctcgc gttcatctcc ttgctgctgc cggcctgggc aatgctggtc
     4021 gccctagggg cactcatcgg acacagcggc atcagtttct ggccgatttg gctggcgggc
     4081 gcggtcggcg cagcgctagg tgactggcta tcctattggg tcgggatcaa gctcgggccg
     4141 gcggtcgccc atgtgtggcc gctgtcgcgc catccaggcc tgctgccgcg cggcgaagcc
     4201 ttcgttagca aatggggcgc gcttggcatc tttatcggtc ggttttccgg cccgctgcgt
     4261 gccacggttc cgctggtggc cggcatattc gccatgccgt tttggcgatt tcagacggcg
     4321 aatttcgtct ccgcctttgt gtgggtcgcc gtgctgctga cattggggga tgttacgcag
     4381 gcgattttca aattaatatg gccctgaccc agctggtcat accaacacac aacctgggag
     4441 gactccatga ccatcttgac acgacgtact ttgctggccg gtgccgcagt tgccggcgcc
     4501 tcggcgggcc ttggctggtg gaactcgcag tcagcccgtg ccgccgccac tcccgctgct
     4561 ggcaagcagg cggcgagctt ttaccgttac aaagtcggca ccatcgaggt caccgtggtg
     4621 agcgacggcg tgaatcgctt cccaatccct gacggtttca tcctcaacgc caaaaaggag
     4681 gaaatcaacg ctgcgctcca agccgccttc atggagaagg acttcttcac cggtccttac
     4741 aatccgatcg tcctcaacac aggcacaaaa ctcgtgctgg ttgacatggg cctcggcgaa
     4801 gcggcctaca actccagcaa gggcatgaac ggcca
//
LOCUS       DATILV010000499         2245 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1397582, whole genome shotgun sequence.
ACCESSION   DATILV010000499 DATILV010000000
VERSION     DATILV010000499.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2245
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1397582"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(223..513)
                     /locus_tag="VLJ17_11320"
     CDS             complement(223..513)
                     /locus_tag="VLJ17_11320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23607.1"
                     /translation="MTNSAKQVGSFAADIFGRKKLMHIIPLNAGRQIDRAGVAERAVF
                     ATRNSLNSQMVRNMKSPFSNPRARTAKLCGHSRPIGVRNYSIGKVCPLPGLR"
     gene            845..2080
                     /gene="istA"
                     /locus_tag="VLJ17_11325"
     CDS             845..2080
                     /gene="istA"
                     /locus_tag="VLJ17_11325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011970474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HSV23608.1"
                     /translation="MLEPEEVSAILRLNELGWGAKRIAQELGISRNTAKEYIAAGGWT
                     PYRQPRRKKALDGREAWLWERFRRHRGNADVIRQELAAEKGTIVSLRTVERAVQTYRR
                     ELAAEARATVRFETPPGKQLQIDFGERLVEIAGSKVRTYLFVATLGYSRRQHIRAFRN
                     ERQESWFEGLESTFTKFGGVTEEVLIDNPRALVVEHDPTTRTVVFNERFKAFAKHWGF
                     RPRACAPYRARTKGKTENGVGYVKRNAIAGRSFPSWEALEAHLEAWTRDVADVRLHGT
                     TGEAPIDRFQRAEAEALKLVAGVPPFHAARELIRRVQGDCAVEIDGNAYSVPWRLIGE
                     TVRATITDGVVRIYHGLHEVAVHPICSGRRRRVIDPGHFAGLTGIKPIPDIALASSPA
                     MPTLLRPLGEYEAMLGGSF"
BASE COUNT          444 a          638 c          735 g          428 t
ORIGIN      
        1 agttcgcgat caacctcaag accgccaaga cgctcggcct cagcatcccg gacaaactcc
       61 tgtacaccgc cgatgaggtg atcgagtgat gatctgatgt cgctcattgt gtagattttc
      121 ggatgccggc ggcggatgac atcgccgctg catcgagccc ggcgtccgaa aatctccaat
      181 gaacgaaatc gcggtggggg atgcggaagg gtgcggcgcg ctctatcgca aaccgggcaa
      241 cggacagact ttgccgatgg agtaatttcg gacgcctatc gggcgtgaat ggccgcacaa
      301 ctttgccgtt ctggcacgag gattgctaaa aggggatttc atgtttcgca ccatctgtga
      361 attcaatgag ttacgtgtgg caaaaacggc acgctcggca acccctgcgc gatcaatctg
      421 tcggccagcg ttcagcggga tgatgtgcat caatttcttg cgaccaaaga tgtcagcagc
      481 aaatgagcca acctgttttg cgctgttggt caagatattt ttgtcatccg cgttgtcggt
      541 gggctaatga taatgcctgc ccgcggatcg atctcctatt ggtgttctcg atcgtgagtt
      601 gcgctgagtc catagcccgg ccgacgatta gcgagacgct tctctcgcca ttattccgac
      661 gaggttccag atcgaaccac actcctaaac taatcctgtg gctcggcctg tcgggcgaca
      721 tgaacaattg accccctgac gacacgagga attgccccct cgcgacatcg tcaaaggggg
      781 ttttatgcag gaagagcgac tcggttcagg ccctctgcgg ttcaacgatc cgcggaggga
      841 ggcaatgctg gagccggaag aggtttcggc gattctccgg ctcaacgagc tggggtgggg
      901 cgccaaacgg atagcgcagg aactcgggat cagtcgcaat accgcgaagg agtacatcgc
      961 ggcgggcggc tggacaccgt accgacaacc gcggcgcaag aaggcgctcg atggccgaga
     1021 ggcttggcta tgggagcgat ttcgccgtca tcgcggcaac gccgatgtga tccgccagga
     1081 gcttgccgcc gaaaagggca ccatcgtcag cctgcgcacg gtcgagcggg cggtgcagac
     1141 ctatcgccga gagctcgcgg cggaagcgcg ggcgacggtg cggtttgaga cgccgccggg
     1201 caaacagctg cagatcgatt ttggcgagcg cctggtcgag atcgccggca gcaaggtgcg
     1261 gacgtatttg ttcgtcgcca cgctcggcta ttcgcgccgg cagcacatcc gggcgttccg
     1321 caacgagcgg caagagagct ggttcgaggg gctggaaagc acattcacca aatttggcgg
     1381 cgtcaccgag gaagttttga tcgacaaccc acgggcatta gtggtcgagc atgatccgac
     1441 gacgcgcacg gtggtgttta atgagaggtt caaggcgttt gccaagcact ggggctttcg
     1501 accgcgcgcc tgcgctccgt atcgcgcgcg caccaaaggc aaaacggaga acggcgtcgg
     1561 ttatgtgaag cggaacgcga ttgccggccg cagcttcccg agctgggaag ccttggaggc
     1621 gcatcttgag gcctggacgc gggatgtcgc cgatgtgcgc ctgcatggca cgaccggcga
     1681 ggcgccgatc gaccgattcc aacgcgccga ggccgaagct ctcaagctgg ttgccggggt
     1741 tccgcccttc cacgcggcgc gcgagttgat ccggcgcgtg cagggcgatt gtgcggtgga
     1801 gatcgatggc aatgcctatt cggtgccgtg gcggctgatc ggcgagacgg tgcgcgccac
     1861 gatcacggac ggtgtagtgc gcatctacca tgggctccat gaagttgcgg tgcatccgat
     1921 ctgttccggt cgccggcgcc gcgtgattga ccctgggcac tttgcagggc tgaccggcat
     1981 taagcccatt ccggatattg cactcgcctc atcgccagcg atgccgacac tactacggcc
     2041 gctcggcgag tacgaggcga tgctgggcgg gagcttctga tgcgcgccgc tgctccggat
     2101 cgtctgagcg agatgctgac gcgattaaag ctgaccggca ttcgcgatca gctcgacggt
     2161 ctgttggaag aggccggtcg acaagagctg agcctgcgcg agacgctggt gctgctctgc
     2221 gagcgcgaga tcacccgcaa agacg
//
LOCUS       DATILV010000500         1594 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2162539, whole genome shotgun sequence.
ACCESSION   DATILV010000500 DATILV010000000
VERSION     DATILV010000500.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1594)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1594)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1594
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2162539"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            47..1234
                     /locus_tag="VLJ17_11330"
     CDS             47..1234
                     /locus_tag="VLJ17_11330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012494769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PA0069 family radical SAM protein"
                     /protein_id="HSV23609.1"
                     /translation="MTYQASVRRRPPEPDPSHFGPAGEIQKVGAAPRFDLGVNAGASL
                     MRRRGRGAQTNASGRFETQAVVAFDDGWQSIEELPPFKTEVAIDTSRKVIARNTSPDI
                     PFDRSINPYRGCEHGCIYCFARPTHAYLGLSPGLDFESKLYMKPDAPELLERELSARG
                     YTPRTIAIGTNTDPYQPIERRYVIMRRILEVLERSGHPVGIVTKSNLVTRDIDILSRM
                     ARRNLVRVGISVTSLDAKLARVMEPRAPTPVLRLEALRELASAGIPTTVMAAPVIPAI
                     NDAEIERILEAAAACGVEAAGYVLLRLPLEVRDLFREWLQANFPDRERHVFALIRQTR
                     GGKDYDATFGKRMTGGGPYAWMIRKRFETTCSRLGLNVHKAPLTTEHFKPPRPASEQL
                     SLF"
     gene            1376..>1594
                     /locus_tag="VLJ17_11335"
     CDS             1376..>1594
                     /locus_tag="VLJ17_11335"
                     /inference="COORDINATES: protein motif:HMM:NF023742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSV23610.1"
                     /translation="MTKNFNAASSGVSRRRYAPRRVGVDMNLIERKAALFRLYPTPQQ
                     ASQMAQIAGACRFVYNLALEQRRDWYRAG"
BASE COUNT          301 a          507 c          465 g          321 t
ORIGIN      
        1 aaatttgttc ttgttttgtt cgttattctg cgttattcaa caagccatga cataccaagc
       61 ttcagttcgc cgtcgcccgc cggaaccgga cccgtcgcat ttcggtccgg cgggcgaaat
      121 tcaaaaggtc ggcgccgcgc cgcgctttga cttgggcgta aatgcaggtg cgagcctgat
      181 gcggcggcgc gggcgtggtg cgcagacaaa tgcttccggc agattcgaga cgcaggctgt
      241 ggtcgcgttc gacgatggct ggcaatcaat tgaggaactg ccgccgttca agaccgaagt
      301 cgcgatcgac acttcccgca aggtcattgc ccgcaatacg tcgccggaca ttccgttcga
      361 tcgctcgatc aacccttacc gtggctgcga gcatggctgc atctactgct tcgcccggcc
      421 gacccacgcc tatctgggcc tgtcgccggg cctcgatttc gaatctaagc tgtacatgaa
      481 gccggacgcg cccgagcttc tggaacgcga gttgtcggcg cgaggttata cgccgcggac
      541 catcgcgatc ggtaccaaca ccgaccccta tcagcctatc gaacggcgct acgtcatcat
      601 gcgtcgcatc cttgaggtgc tggagagatc cggacacccg gttggcatcg taaccaaatc
      661 gaaccttgtg acccgcgata ttgacattct ctcccgcatg gcgcgccgca acctggtgcg
      721 ggtcggcatt tcggtgacct ctctcgacgc caagcttgcc cgcgtcatgg agccgcgcgc
      781 cccgacaccg gtgctacggc tcgaagcatt gcgcgaactt gcgtccgccg gcattccgac
      841 caccgtgatg gcggcgcccg ttatcccggc catcaatgat gcggagattg aacgcattct
      901 cgaagcagct gctgcctgtg gcgtggaggc ggccggctac gtcctgctgc ggctgccgct
      961 tgaggtgcgc gacctgttcc gcgagtggct tcaagccaat tttccggacc gcgagcgcca
     1021 cgtctttgcg ttgatccgcc aaaccagagg cggcaaggac tatgacgcaa cgttcggcaa
     1081 gcgcatgacg ggcggaggcc cttatgcatg gatgatcaga aagcgcttcg aaaccacgtg
     1141 ctcccgtctt ggcctcaatg tgcacaaggc gccgctgacc accgagcatt tcaagccacc
     1201 ccggccggca agcgagcagt tgagcttgtt ttgatgccca tcaatgcaaa cggcccagca
     1261 cacgtgctgg gcctcggaat ttctctaccg ttctgcccgc gcttttcgcg gccatccacg
     1321 tctttcttac ggcagcccag caagtaagac gcagaaggcg gggacaggcc cagccatgac
     1381 caagaatttt aacgcagcaa gctccggggt ttcacgccgg agatatgcgc cgaggcgcgt
     1441 tggcgtcgat atgaatctga tcgaacgcaa ggccgctctg ttccgcctct acccgacacc
     1501 tcaacaggcg tcacaaatgg cgcagatcgc gggtgcgtgc cggttcgtct ataacctcgc
     1561 tcttgagcag cgccgcgact ggtatcgtgc gggc
//
LOCUS       DATILV010000501         5020 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4461332, whole genome shotgun sequence.
ACCESSION   DATILV010000501 DATILV010000000
VERSION     DATILV010000501.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5020
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4461332"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..460)
                     /locus_tag="VLJ17_11340"
     CDS             complement(<1..460)
                     /locus_tag="VLJ17_11340"
                     /inference="COORDINATES: protein motif:HMM:NF015669.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="META domain-containing protein"
                     /protein_id="HSV23611.1"
                     /translation="MTKQIIAMLPRVASLALSLVAASTATSAKGEASSSLAGSTWRLA
                     ELRSSDDAIAIVRPDDSAKYEMTLGTDGAAALRLDCNRAAGRWTSSATNQTTGTMTFT
                     PLAMTRAACPPGSLDTRVARELGFVRTYIVEGDSLHLIMMADGGSQVWSRV"
     gene            complement(1015..1443)
                     /locus_tag="VLJ17_11345"
     CDS             complement(1015..1443)
                     /locus_tag="VLJ17_11345"
                     /inference="COORDINATES: protein motif:HMM:NF013777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSV23612.1"
                     /translation="MHGRADSNISLRHEPACSAEIVLEALRGRWTIHILKCIADQGAP
                     HFGGLKRAIPGVSSKVLTDRVRHLEQAGILQRHPKPALRPEMLYSLTSRGLELKAVLD
                     NLKELGARWQREDTSKADWGNQGIAEAASGVRWVPRQPIP"
     gene            2276..4570
                     /locus_tag="VLJ17_11350"
     CDS             2276..4570
                     /locus_tag="VLJ17_11350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007800481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HSV23613.1"
                     /translation="MYFLSSKASRIRQREAQKARDNRSEIRIAVNRGQITRRDLYKWG
                     LFTTTGFLAWKNGLSPFARSAFAAIPTGTPRSPLFGAQKFTQRLPRLAVQTPIPLVRD
                     KFDNAAFPATTGELASKRLSYHTDFTADPTNPAFINPVTGRGPIEGRPPGEVFAQQRW
                     DQFFPQVGYVSSWGQVAPNTRFHPNFPAQDPNSVWTWGTGRFTRGTLPPMLIKGRYGQ
                     PILFRAYNNTPVNAAENNGFGHNETQLHFHNAHNGAESDGAANTHHFPGTFYDYRWST
                     TLARADKINTQATDPRASGPNGNGGLVNVAGDLREIQGTMWAHDHRFFFTAENVYKGN
                     LMKINYYSGPDRGNEGLVDGVNLRLPSGSSLDFGNLDFDVDLMLYDCAFDPAGQLFFD
                     IFAVDGFLGDVPLVNFAYAPFMEILPRKYRFRILASTISRWWLLTLADAAGRAVPFQF
                     IANDGNLVVNPILLTSLPQQGNAERYDIVVDFSRFRIGDRIRLVNRQKMRDDGRGPDQ
                     PFTLAQALAGDPNDPAIGPIMEFRVVSQVESVDVPGVIRRATDPDPSVVPAVLTQQIP
                     VVTPVRVRLFEFGRSGGGDSRNPKTGECTPSCAEFATFPWSIKVNGEDAHTFNANRIS
                     ALVPRPGEIEHWTIVNGGGGWDHPIHLHFEEGVTISRGRDGRDPIPATEKLVRKDVWR
                     LGTTGDRSVNFQVQFGEYGGAYVQHCHNNMHEDFAMLMRLQLLTGVAGSPQTAVTPTP
                     NPTPDGVFFTTPEILPEGDPRVVT"
     gene            complement(4703..>5020)
                     /locus_tag="VLJ17_11355"
     CDS             complement(4703..>5020)
                     /locus_tag="VLJ17_11355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23614.1"
                     /translation="PSRKCCRRALRHPSARWLWQTVYFVGSNVNGSSLPNCSGLPIAW
                     NLSERAFDRWIASAIIAGVAVVRGFLVFDKVAADVDVDVDVDIDVDVDVEIDVDVDVV
                     DVV"
BASE COUNT         1001 a         1570 c         1480 g          969 t
ORIGIN      
        1 tgacacgcga ccaaacttgg ctgccgccat ccgccatcat gatgagatga aggctatcgc
       61 cctcgacgat ataggttcga acgaagccca gctctcgggc gacgcgcgtg tcgagtgatc
      121 caggcggaca ggccgcgcgc gtcatggcga gcggtgtgaa ggtcatcgtc cctgtcgtct
      181 ggtttgtcgc ggacgacgtc catcgccccg ctgcgcgatt gcagtcgagc cgcaatgcgg
      241 ccgctccgtc tgtgccgagc gtcatttcat attttgccga atcgtctggc cgcacgattg
      301 cgatggcatc gtccgacgac cgcagttcgg cgagccgcca agtcgaacca gcaaggctgc
      361 tcgacgcttc gcccttggcg ctggttgcgg tgctggccgc gaccaagcta agcgccaaag
      421 atgcaacacg cggcagcatc gcaatgatct gtttggtcat gcgcttctcc cgttgctgta
      481 agtaccgcct gacatggaag gtcacggcgc gccgtttgaa gcgtgtccgg tggactgctg
      541 ggttggacgg cgcaggatca atccaggatc aatcccagat aaataggaga cggcgtacct
      601 tgcgccgttt tccgtcgact tcataccgat aggtcgagat cgttttcacc tcgtcagtgt
      661 gtagcaggtc aggccgttgc cgaatgacgt catggcgggc caacgtggta ggaacgtggt
      721 gatgaggaca cgatcggatt ggtatcctcg tcgggaagca caccctatcg cgccgctcct
      781 gacgtcttcc cgtgccgcaa tggtcagcaa gtttgcgagc aatgccattg gtcgggctcg
      841 tcaaggtttg gggccagatt tcttcgccgg ctcacacttc aagaaccttg gccaccaagc
      901 gcttcgatca gacgatggac ctcaccgcct gaccgactgt tttgacgtta ccggagattg
      961 tgccacacca attgcaacac gatcagctac gataccaagc tctcggcctt ggcgttatgg
     1021 tatgggttgc cgcggcaccc atcgaacccc tgaggccgcc tcggcgatgc cttggttccc
     1081 ccagtcggcc ttgctcgtgt cttcccgttg ccagcgcgcc ccaagttctt tcaggttgtc
     1141 aagaacggcc tttagctcca ggcctcggct cgttagcgag tagagcattt ccggccgaag
     1201 cgcgggcttt gggtggcgtt gcaagatgcc ggcctgctcg agatggcgga cccggtcggt
     1261 cagcaccttg ctggaaaccc cggggatggc gcgtttcaaa ccaccgaaat gaggtgcacc
     1321 ctgatccgca atgcatttca ggatgtggat tgtccaacgg cctctcaacg cttccaagac
     1381 gatttctgcc gagcaggccg gctcgtgtcg caatgaaatg ttcgaatcgg ctcgcccgtg
     1441 catggcggtc tccggcttgc cacagctcgc ggcgcgcttt cggtctctag ctacttccgc
     1501 gtcgtccagg ggctcgggga gcgagtcttg gccaagcgct gcccacgcct tctcctggag
     1561 cacgaacacc gtggtgcgcc gcagcgtcca tgacgcggcg taccatcacc tattggtgat
     1621 aataatgagc gatggtcggg ccaatgcagc gcaccgaatc catctttcag tcgggcagcg
     1681 gacgttcggg acgccggcgt tggtgtgatc gcaccggctt ggcgatgctc aggagagtaa
     1741 aacgcgcttc gccagcgtca tctcacacca tgatgcgaag ggcatgtccc catgagcacg
     1801 caaacgaagc agatcgtgct ctggatgctg cgaatgccgc acaatttttg gatgctggaa
     1861 aaatcttcgg caggagccgt ccatcagcgg tccgcattac atctgcgcgt tccaacgctg
     1921 atgatttcca ttttttgcaa acgcgtgcgg cagcacgccg catccgttac aaaaaagtaa
     1981 gtaattgcgt tcagtaaaca tcatacatta ccgtcattga ttgtacctta ccgtcactga
     2041 tcgcgaaatc agaagagagg cgacgtgcag gtttgatccg gtgtcctgca caagcggcgt
     2101 aacttgaagg tcgcaactgc gatcgcatca ccgatcacca tcaggctgcc gagcagcagg
     2161 gcaagatgat cgacgaagtc ggtccgtggg cattcacccg cgacgcgggg gatgttgtgc
     2221 ctgatcagtc atcaggtcgt ttcaagtttc tgatgaactg cgaatggagg acaaaatgta
     2281 ctttctctcc agcaaagcat cccgcattcg acagagagag gcgcagaagg cgcgcgacaa
     2341 tcggtcggaa atcagaatcg cggtcaatcg cggccagatc acgcgacgtg acctctacaa
     2401 atgggggctc ttcacgacga cgggcttctt ggcttggaag aacggcttga gcccgtttgc
     2461 ccggagcgcc ttcgccgcca tcccgaccgg cacgccgcgg agcccgttgt tcggcgccca
     2521 gaagttcact cagcggttgc cccggcttgc cgtgcagacg ccgataccgc tggtccgtga
     2581 caaatttgac aacgccgcct tccccgccac cacgggcgag ctcgcgagca aacggttgtc
     2641 gtatcacacc gatttcacgg ccgatccgac caacccggcg ttcataaatc cggtgacagg
     2701 cagagggccg atcgagggcc gcccgcccgg cgaagtgttt gctcaacagc ggtgggacca
     2761 gttcttcccc caggttggct acgtgagttc atggggccag gtcgcaccaa acaccaggtt
     2821 ccatccgaat ttcccggcgc aagatccgaa ctcggtttgg acgtggggca cgggccgctt
     2881 cacgcggggg accttgccgc ccatgctcat caagggccgt tacggccagc ccatcctctt
     2941 ccgggcctac aacaacacgc cggtcaacgc cgcggaaaac aatggcttcg gccacaacga
     3001 gacccagctc cacttccaca atgcgcacaa cggggccgag agcgacggtg ccgccaatac
     3061 gcaccacttt ccgggcacgt tctacgacta ccgctggagc acgacgctgg cccgggccga
     3121 caagatcaat acgcaagcga ccgatccccg cgcatcagga cccaacggca atggcggtct
     3181 cgtcaacgtc gcgggcgatt tgcgcgagat ccaaggcacc atgtgggccc acgatcaccg
     3241 cttcttcttc acggccgaga atgtctacaa aggcaatctc atgaagatca actattacag
     3301 cggccctgac cgcggcaacg agggcctcgt cgacggcgtc aatctgcggc tgcccagcgg
     3361 cagctcgctc gacttcggca acctcgattt cgacgtcgac ctcatgctct atgattgcgc
     3421 cttcgatccc gcaggccaac tcttcttcga catcttcgcc gtcgacgggt tcctgggcga
     3481 tgtgcccctg gtcaacttcg cctatgcgcc gttcatggaa atcctgccac ggaagtaccg
     3541 cttccgcatt ctcgcttcga cgatctcgcg gtggtggttg ctgacccttg ccgacgcggc
     3601 cggtagagcg gtgccgttcc agttcattgc caatgacggc aacctggtgg tgaacccgat
     3661 ccttctgacg agcctgccgc aacagggtaa tgcggagcga tatgacattg tcgtcgactt
     3721 ctctcgcttc cggattggcg accggatcag gctggtcaac cggcagaaga tgcgtgacga
     3781 cgggcgtggg ccggaccagc cattcacgct ggcgcaagcc ctcgccggcg atccaaacga
     3841 ccctgccatc ggccccatca tggaattccg ggtcgtcagc caggtcgaaa gcgtcgacgt
     3901 gccgggcgtc atccgccgcg ccactgaccc cgacccgagc gtggtgccgg ccgtcttgac
     3961 ccagcagatc ccggtcgtca cccctgtcag ggtcaggctc ttcgagttcg ggcggtcggg
     4021 cggtggcgat tcgcgcaatc cgaagactgg cgaatgcacc cccagctgtg cggaattcgc
     4081 gacgttccca tggtcgatca aggtgaacgg ggaggacgca cacaccttca acgccaaccg
     4141 gatttcggcc ctggtcccgc ggccaggcga aatcgagcac tggaccatcg tcaacggagg
     4201 cggtggctgg gatcatccga tccatctcca tttcgaggaa ggcgtgacca tatcccgcgg
     4261 gcgcgacgga cgcgacccaa tccccgccac cgaaaaattg gtcagaaagg acgtctggag
     4321 attgggcacg accggcgaca ggtcggtcaa cttccaggtt cagttcggag aatatggtgg
     4381 ggcttatgtc cagcactgcc acaacaacat gcatgaggac ttcgccatgc tgatgcggct
     4441 ccagctcctg accggtgtgg cagggtcgcc gcagactgcg gtcacgccga cgcccaaccc
     4501 gacgccggac ggcgtgttct tcacgacccc ggaaatcctg cccgagggcg accccagagt
     4561 ggtcacctga tcggaaatgc cggttgaaga gcgcaagatt gaggagaatt gagatgacat
     4621 cgacgtacac gcctttgagg ctgatagttg ccggcgccgc ggcagcgatg gccctggcca
     4681 tcggcggccc gtccgcatcc gctcagacca cgtccacaac gtcaacgtcc acgtcgattt
     4741 cgacgtcgac gtcgacgtcg atgtctacgt ctacgtctac gtctacgtcc gcggcaactt
     4801 tgtcgaagac caagaaaccg cggactacgg cgacgccagc aatgatcgcg gaagcgatcc
     4861 aacggtcaaa ggctcgttca gacaagttcc aggcaatggg caggccggag cagttcggca
     4921 gcgaggaacc gttcacgttc gatcccacga agtagacggt ttgccaaagc caacgcgccg
     4981 aagggtgtcg caacgccctt cggcagcatt ttctggaggg
//
LOCUS       DATILV010000502         2740 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1138762, whole genome shotgun sequence.
ACCESSION   DATILV010000502 DATILV010000000
VERSION     DATILV010000502.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2740
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1138762"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(60..842)
                     /locus_tag="VLJ17_11360"
     CDS             complement(60..842)
                     /locus_tag="VLJ17_11360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010967853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSV23615.1"
                     /translation="MMDSKEFDGKRALITGGTRGVGEAIVRRLVVGGATVATTARSPM
                     PDGLSASLFVQADLRTPEGVDKLIRHVLDQLNGLDILIHNVGGSAAPGGGALALSDAD
                     WQGAFDMNLFAAVRLDRGFLPSMLRQGSGVIIHVSSIQRTLPLFESTLAYAAAKAALT
                     NYSKGLSKEVAPKGIRVNTVAPGYTETEAAQGMVKEIANRTGITAETARQRIMDALGG
                     IPLGRPNRPEEVAELVAFLVSDRASSITGSEYVIDGGTVPTI"
     gene            874..1245
                     /locus_tag="VLJ17_11365"
     CDS             874..1245
                     /locus_tag="VLJ17_11365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009210218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSV23616.1"
                     /translation="MTSTHEKVRYAPNGKRHTPISAAQGVEGALKILEGRWKLTILFH
                     LFGGKLMRFSDLERAIPAISQKMLIQQLRQMERDGIIQRTVYPQVPPKVEYRLTKWGQ
                     ALCPALDRLLKWMESRAASND"
     gene            complement(1268..2176)
                     /locus_tag="VLJ17_11370"
     CDS             complement(1268..2176)
                     /locus_tag="VLJ17_11370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23617.1"
                     /translation="MKIPTAAITMLIACSSSLWAQWPKFKEAGLARDAEGRALMDGRT
                     PRTPDGKPDLSGDWMRADRDPLPQELAGIASARGETNRGGVPVERSAAPFPPDPNAPP
                     LATFFELGANVPGGLPFTPWAADLRKARMATNDKDNPDANCMPMGITQFHMQPQPRKI
                     VQTPGLIIILYEANYGLRYIYTDGRSLPPQGEPTPWYYGYSVGRWDGDTLVVETNNLR
                     GAEDGPYDGWLDVRGSPYSEQAKFVERFRRPIFGKLEIDVTVDDPKSYTKPFTVRINQ
                     RFMADEEPMEFICNENQQFRKRIKVD"
     gene            complement(2173..>2740)
                     /locus_tag="VLJ17_11375"
     CDS             complement(2173..>2740)
                     /locus_tag="VLJ17_11375"
                     /inference="COORDINATES: protein motif:HMM:NF019157.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tannase/feruloyl esterase family alpha/beta
                     hydrolase"
                     /protein_id="HSV23618.1"
                     /translation="IVSAQPNAKPADFNLAENTMRYLVHKPPKPDYDYKTFNFDRDIH
                     IVRDWSKLADAKNPELSKFRKHGGKLLMTYGWADSILQPMMGVNYYEQAMSKNGPDTP
                     EFFRLFMIPGMAHCAGGIGPDRHDPMTSMINWVEKAKAPASMTASRVVNNQVVRTRPL
                     CPYPQVARYSGQGSIDDAANFRCVGAKQ"
BASE COUNT          570 a          779 c          776 g          615 t
ORIGIN      
        1 aagagaagaa caaggccctc gcgacaaatc gttacgaagc cgggatatct tgctctttgc
       61 tagatggtcg gaaccgttcc tccgtcgatt acatactcgc tacctgtgat ggaagaagct
      121 cgatccgaca ccaagaatgc cactagttcc gcgacttctt caggacggtt tggtcttccg
      181 agtggtatgc caccaagagc gtccataata cgctgtcgtg cggtttccgc ggtgatgccg
      241 gttcgattcg caatttcctt caccattcct tgtgcagcct cagtttctgt atatcccggc
      301 gccactgtgt tcacgcgaat acccttgggc gcgacttcct tagaaaggcc cttgctgtaa
      361 ttcgtcaagg cggccttcgc ggcagcatac gcgagtgtcg attcaaatag cggcagcgta
      421 cgctggatag acgagacatg gatgatcacg cccgaacctt gcctcaacat tgatggaaga
      481 aaaccccgat ccagccgaac cgcagcaaac aggttcatat cgaatgcacc ttgccagtca
      541 gcatcggaca atgcgagtgc gccgccacct ggcgccgctg aaccgccgac gttgtggatc
      601 agaatgtcga gaccgttgag ctgatccaat acatgccgta tcaacttatc tacaccctca
      661 ggtgtcctga ggtcagcttg cacaaatagg cttgccgaaa ggccgtccgg catcggcgag
      721 cgtgcagtgg ttgctactgt cgctccgccg acaacgagac gtcgcacgat ggcctcacct
      781 acgcccctcg ttccgcccgt aatcaatgcg cgtttgccgt caaattcctt ggaatccatc
      841 atttgattcc aatatcgcgc tagcattacc cagatgacaa gtacgcacga aaaagtaagg
      901 tacgcaccaa atggtaagcg tcatacgccg atatcggccg ctcaaggtgt cgagggtgca
      961 cttaaaattt tggagggccg gtggaaattg acaattctat ttcacctttt tggcggcaaa
     1021 ttgatgcgct tttcggacct ggaacgcgcc ataccggcaa tctcacaaaa aatgctgatc
     1081 cagcagcttc ggcagatgga acgtgatggg attattcaac gcaccgtcta tccgcaagtt
     1141 ccacctaaag tcgaatatcg gttgacgaag tggggacagg ccctgtgtcc cgcgctcgac
     1201 cgactattga aatggatgga atcacgagct gcgagtaacg actagagtcg ctggatttgc
     1261 acttgattca gtccaccttg atgcgcttgc ggaattgctg gttctcgttg cagatgaatt
     1321 ccatgggttc ttcgtctgcc ataaaccgct gattgatgcg cacggtgaac ggcttcgtat
     1381 aagacttcgg gtcgtccacc gtgacgtcga tttccagttt gccgaagatg ggacggcgga
     1441 atcgctcgac aaacttcgcc tgctcgctgt acgggctgcc gcgaacatcg agccagccgt
     1501 cgtagggacc gtcttcggcg ccgcgcaggt tgttggtttc cacgacgagc gtgtcaccgt
     1561 cccatcggcc gaccgagtag ccgtagtacc atggcgtggg ctctccctgc ggcggaagac
     1621 tgcggccgtc ggtgtagata tagcgaaggc cgtaattggc ttcgtaaagg atgatgataa
     1681 gccccggcgt ctgaacgatc ttgcgaggct gcggctgcat gtggaattgc gtgatgccca
     1741 tcggcatgca gttcgcgtcc ggattgtctt tgtcgtttgt ggccatgcga gccttcctca
     1801 ggtctgctgc ccacggagtg aagggcaagc cgcccggaac gttggcgccg agttcaaaga
     1861 acgtcgcaag aggcggcgcg ttcggatccg gcggaaacgg cgcggccgac cgctcgacgg
     1921 gaaccccacc acgattggtt tcgccgcgtg ccgaggcgat cccggcaagt tcctgcggca
     1981 aaggatcacg gtctgctcgc atccagtcgc ccgagaggtc gggcttgcca tcgggtgtgc
     2041 gtggcgttcg gccatccata agcgcgcgcc cctcggcgtc gcgtgcaaga ccagcctcct
     2101 tgaatttcgg ccactgcgcc caaagggaac tggaacacgc gatcagcatg gtgatcgcgg
     2161 cggttgggat tttcattgtt ttgctccaac gcaacggaaa ttggccgcgt cgtcgatgct
     2221 gccctgtccg gaataccgcg ccacttgcgg gtaagggcag agcggccgcg tgcgcaccac
     2281 ctgattgttg accacgcggc tcgccgtcat cgacgccgga gctttagcct tttccaccca
     2341 gttgatcata gaagtcatcg gatcgtgacg atcgggacca ataccgccgg cacagtgcgc
     2401 catgccggga atcatgaaca ggcggaagaa ctccggagtg tccggaccat ttttcgacat
     2461 cgcctgctcg tagtaattca cacccatcat gggctgcagg atggagtcgg cccacccata
     2521 agtcatgagc agcttgccgc catgtttcct gaacttcgat aattcgggat tctttgcgtc
     2581 ggccagtttg ctccagtcac gtacgatatg aatgtcgcga tcgaagttga acgtcttgta
     2641 gtcgtagtcc ggcttcggcg gcttgtgcac gagatatcgc atcgtgtttt ccgccagatt
     2701 gaagtcggct ggcttggcat tcggctgtgc gctgacgatc
//
LOCUS       DATILV010000503         6342 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4718230, whole genome shotgun sequence.
ACCESSION   DATILV010000503 DATILV010000000
VERSION     DATILV010000503.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6342)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6342)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6342
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4718230"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(305..1192)
                     /locus_tag="VLJ17_11380"
     CDS             complement(305..1192)
                     /locus_tag="VLJ17_11380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-formylglutamate amidohydrolase"
                     /protein_id="HSV23619.1"
                     /translation="MTVHSDEFDPPFEILEPAEWRGPVAFNSPHSGCVYPRAFLAAAR
                     LDLAILRRSEDCFVDELLVGVVRRGHPLMRAHFPRCFVDVNREPYELDPRMFDGRLPS
                     FANTRSMRVAGGLGTVARVVGDAQEIYDQRIPVDDALRRIEGLYKPYHRALRKLMTRI
                     HRQFGTAILVDCHSMPSAAGPKDERPRADIVIGDRYGTSCLSVVADTIELTFRERGYS
                     VSRNKPYAGGFITEHYGNPVAGLHSVQLEINRALYMDERRFERSASFSAVAQDLEVVC
                     DRINQIALQELHPYRSAAE"
     gene            1376..1738
                     /locus_tag="VLJ17_11385"
     CDS             1376..1738
                     /locus_tag="VLJ17_11385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003531148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV23620.1"
                     /translation="MTNKILLAEDDADMRRFLVKALQTAGYDVISYDNGLSAYQRLRE
                     EPFELLLTDIVMPEMDGIELARRAAELDPDIKIMFITGFAAVALNPDSTAPKHAKVLS
                     KPFHLRDLVNEVGKMLAA"
     gene            1966..2496
                     /locus_tag="VLJ17_11390"
     CDS             1966..2496
                     /locus_tag="VLJ17_11390"
                     /inference="COORDINATES: protein motif:HMM:NF024287.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3828 domain-containing protein"
                     /protein_id="HSV23621.1"
                     /translation="MTGNVFNWLASSRRHFIVGLIVLSSVPAHGKEQPVKAFLDQIYR
                     HYVGSSTGEAKGIALPDPKAVRGYFTMGLASLIIEDRAIETRQGEQPALDGDPFVGHR
                     EWDISNMAINVKETGPFRATGTVTFTNGGKPEKIVLVLQRLGSDWRIADIEWESGSLR
                     NTFRRKAVDIGIAAPR"
     gene            complement(2906..3028)
                     /locus_tag="VLJ17_11395"
     CDS             complement(2906..3028)
                     /locus_tag="VLJ17_11395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23622.1"
                     /translation="MTHPVELQGDMPSKATHVSVLRDIIGGPRCAADLPTFYWR"
     gene            complement(3548..3805)
                     /locus_tag="VLJ17_11400"
     CDS             complement(3548..3805)
                     /locus_tag="VLJ17_11400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23623.1"
                     /translation="MAALVLIFWLAMMRASFGLIAPRNGSVIAWLCSAVPLSIAGTLY
                     PIVQMEQPYTGLIKIWSAPVRAAFDQLGQQRRTIGGVTIAP"
     gene            4023..4097
                     /locus_tag="VLJ17_11405"
     tRNA            4023..4097
                     /locus_tag="VLJ17_11405"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4055..4057,aa:Val,seq:gac)
     gene            4274..4564
                     /locus_tag="VLJ17_11410"
     CDS             4274..4564
                     /locus_tag="VLJ17_11410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23624.1"
                     /translation="MASRHPEMSLAFLALMSVIFFASSGGNTLLLVLSVLINYALGIV
                     IANGQNNKTTMATYSLIVALISNLGTLAYYKYANWRIDNISNITGHRWRPWM"
     gene            4564..4890
                     /locus_tag="VLJ17_11415"
     CDS             4564..4890
                     /locus_tag="VLJ17_11415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23625.1"
                     /translation="MLLIGISFFTQIAFLTTAMLERCAKQSSLTIYCSSLFFPPHSRT
                     NSSPQRDDAAVCRHGQQNTDVEKLCPWPDHVSDRSCKEIAAGGRRIRIRCSGLLVLVG
                     NLAGAI"
     gene            5016..6119
                     /locus_tag="VLJ17_11420"
     CDS             5016..6119
                     /locus_tag="VLJ17_11420"
                     /inference="COORDINATES: protein motif:HMM:NF014841.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSV23626.1"
                     /translation="MTRIVIEEDHFLKIVPVVLDPATPEAHRRAVAGFFAHDEPDFLG
                     WCSRLQGRLSGLYPAEVVFAADEADLKAKIADADGVVVESFRISDALLSAASRLAIVH
                     KFGTITTNIDVAACARRGIVVATLRRMVNVAVAEQACAFMLALAKRIGEFNGLVEETA
                     LRNAGLRVRPRQGRYIGYSNFAGITGLKTLLGATLGVVGFGEIGREVARRARAFEMEV
                     VYFQRSPLASALEQELGVRYLPLSDLMAQADYILVQLPSTASTRGLIGRDALGRIKPG
                     AVLIDVARPELIDHDALVDTLESGRLGGLGLDVLYSEPAEPSEPLLRYRDRNVILMPH
                     TAIGARANALRDVESLCVELWRAIASPPDTHIR"
BASE COUNT         1288 a         1816 c         1874 g         1364 t
ORIGIN      
        1 ttcttatcag cggtcgtaat tcatcacgtc caaagcgcgg gctttgggtg ccaaaacaag
       61 aggttaggcc aacgcgtgat gggtagctgc tatttgcctc ttgaattttg tgcagcgcag
      121 tgacatattg cggcggtgcg gtagtgcgtt cgtcgcatta ccgtcgccct tcttgggcgt
      181 ttcctcccta gacttgggtc actggccacg ccagtgaccc ttttttcaca atattcaatg
      241 attccgcgct aaattatgtt tagcttgtgg ccggctgcgg cccaatcagc cccgattgtg
      301 gcgcctattc ggccgcggac cgataagggt gcagttcctg cagggcaatt tggttgattc
      361 ggtcgcaaac cacctccaaa tcctgggcaa cagcggaaaa tgaagccgat cgctcaaagc
      421 gacgctcgtc catgtacagc gcccggttga tttcgagttg aaccgaatga agcccggcga
      481 ccggattgcc gtagtgctcg gtgataaagc cgccggcgta tggtttgtta cggcttacag
      541 aatagccacg ttcccggaat gtcagctcga tcgtgtcggc aacgacgctc agacagctgg
      601 tgccataccg atcgccgatt acgatgtcgg cgcgggggcg ctcgtctttt ggaccggcgg
      661 ctgacggcat agaatggcaa tccacaagga tcgccgtccc gaattggcgg tggatccggg
      721 tcatgagctt acgcagcgcc cgatgatagg gcttatagag cccctcgatt cggcgcagcg
      781 cgtcgtcgac cggaatgcgc tggtcataaa tttcctgcgc atctccgacc acgcgggcga
      841 ccgtacccag gccgccagcc acccgcatcg agcgcgtgtt ggcaaacgac ggtaaccggc
      901 cgtcgaacat gcggggatca agctcgtaag gctcgcgatt aacgtcgacg aaacagcgcg
      961 ggaagtgcgc ccgcatcagc ggatggccgc gccggacgac gccgaccagc aattcatcca
     1021 caaaacagtc ctcagaacgc cgcagaatcg ccaggtcgag acgcgccgcc gccaaaaagg
     1081 cgcggggata gacgcagccg ctgtggggcg agttgaaagc caccggtccg cgccattcag
     1141 ccggctcgag gatttcaaac gggggatcaa attcgtcgga atgtacagtc atggactcat
     1201 cgagggtctc gttcctaagt gcgccgttgc cgaaatgcca tagtgttctt tctgacagcc
     1261 agcatagttt caattcactt catatttacc aagagtacgc cttataggaa gctatgaatt
     1321 agggggaggg cctggggtag gatcgacccc gccgggcacc aggctgacga atcgcatgac
     1381 gaacaagatt ttactagctg aagatgatgc cgatatgcgg cgttttctcg tcaaggcgct
     1441 acaaacggcc ggttacgacg tcatttccta cgacaacggg ttgtcggcct atcagcgctt
     1501 acgggaggag cctttcgaac tgctgctcac cgatatcgta atgccggaaa tggacgggat
     1561 cgagctggcg cggcgggcgg cggaactgga ccccgacatc aagatcatgt tcattaccgg
     1621 atttgccgcg gtggcgctca atccggattc cacggcaccc aagcacgcaa aggtcctttc
     1681 caagccgttt catctgcgcg accttgtcaa cgaggtcggc aagatgcttg cggcatagtc
     1741 acggccggca aatcggcgtc catcagggtg aagcgaagag ccgtgccaca atatgggctc
     1801 gcgcgcggaa caaaaatgtg caagcagcgt tgccttatat caatgaactc cgtcgaaatg
     1861 tctgatactt tgaataatcc aaacaggtaa ttcgcggcgg gacggccaag tcgtacaggc
     1921 ttggcgaggg aagggggtga attcgcaacg aggtgtgagg cgcgcatgac aggaaatgtc
     1981 ttcaactggc ttgcgagctc acgacgccat ttcattgtgg gtttgatcgt tctgtcgtcg
     2041 gttccggccc acggtaagga acaacccgtc aaggcatttc ttgatcaaat ctatcggcac
     2101 tatgtcggca gctcgaccgg cgaagccaag ggtatcgcac ttcccgatcc aaaggccgtg
     2161 cgcggctatt tcaccatggg actcgcctcg ctgatcatcg aggatcgtgc aatcgagacc
     2221 cgacagggtg aacagccggc gcttgacggc gatccgttcg tggggcaccg cgaatgggac
     2281 atttccaaca tggcgattaa cgtcaaggag accggcccgt tccgggcgac cggcactgtc
     2341 actttcacga atggcggcaa gccggaaaaa atcgtcctcg tgctgcagcg tcttggatct
     2401 gattggcgca ttgcggatat cgagtgggag tccggaagtc tgcgcaatac tttccgccgc
     2461 aaggcggtcg atatcggcat tgccgcgcct cgttgaagcg gatgcgatgt cggaatagaa
     2521 ggggtggaga atgagtgcga cgacggcctg ctagcgatcc aggccgttac gcgcgatcca
     2581 gtcgagcgcc ggcctcgcgg cgccgtcaaa cgtgctgggt gtgccatagt cggagtcgtc
     2641 gggattgatc agaaggacgt tcggtgcccc gtttggtgca acgacgcgcg caggccaatc
     2701 aaggtgtcga tctcgttgcc tcgcgttcaa tcgcgccgcg aaactgttgc ggcggcgtgc
     2761 cggtgttttg ccacgtggca agtcaccacc ccgagcccga acaacaacgc ggactgagag
     2821 cgccccaata ggcaaccggc ctcgtatatt tcaatggtgt cgtcatccgt cctctccttt
     2881 ctgcttgcct cccagcactc ttgaatcagc gccaatagaa cgtcggcagg tccgccgcgc
     2941 aacgcgggcc accaatgatg tcgcgcagca ccgaaacgtg cgtagccttc gacggcatgt
     3001 cgccttgcag ttcgaccgga tgggtcatca cgagctcccc aaccgttggc ccgcggaggg
     3061 cagttcacct caagcgcgac tttgcttcgg tgtattgaca atggcaaaat tgggcgtctt
     3121 gcgcgatgaa ataaattgtt tcaggatcgc aaactgcagt gaggtgacta attacgaagg
     3181 tgtgcgaagg aggctcgcaa gtgcgatcta ctcagaagtt ttcctactcc gtctttgcgg
     3241 catctacgcc gctacgccgt ctttggacgc gcagctgccg cgcattcgtt atcctggcgt
     3301 tgtcccttgc cgcgatcgtg tcctgcgcct ccatagtgca agctcatgga gccaaatata
     3361 gctctttggc cagcagtcct gcgacgtgct ccgcgcaatg cgcagtatct cgcggcacca
     3421 tttggtgtcc gcatttttta accaccacgg agcattatcc ctgcgccggt tacaagatgc
     3481 aatcgacggc gtgcggggag cagttgaagc gcgtattcat gtgtcgatga tcgattgctt
     3541 cgccctgcta aggagcgatc gtgacaccgc caatcgtcct tcgctgctga ccgagttggt
     3601 cgaaggccgc acgaaccgga gcgctccaaa tcttgatgag ccccgtatag ggctgctcca
     3661 tctgtacgat cggatagagt gttccggcta tcgataaagg cacagctgaa cagagccacg
     3721 cgatcacgct gccgtttcga ggtgcgatga gaccgaagct cgctcgcatc attgcgagcc
     3781 agaaaatcag gacaagagca gccaccgaat gccgccggcg acggcacatc gaagccacca
     3841 ttttcccagg tatggtccgg tgcatctcaa cttgggtcgg cccaccagca gggtaagccc
     3901 gggaggctct ccgcctccca gaaccccctt ggagtcccct gtagcggcgt ccgacgcttg
     3961 ctccagcgcg aaccgcttgc ccatacctgt gcgagccgat ataggatcgg accaacccct
     4021 ccgggcgcgt agctcagcgg tagagcacta cctcgacacg gtaggggtca caggttcaat
     4081 ccctgtcgcg cccaccatcc tagacctgtc cggaatccca cacctgtccg gaatggagca
     4141 agtgccatcc ggacgagttc cgccaacgcc cgtaggacgc gcctaattgc gggagatcag
     4201 ggcatcataa tgcggtctgt tccctgcaat ttgtgctgct gcttttaccg ctgacgatcg
     4261 cgggattttt ttgttggcat ctcgccatcc ggagatgtcg ctggcgtttc tggccctgat
     4321 gtcggtgatc ttttttgcct cctccggagg caatacgctt cttctggtat tatccgtatt
     4381 gatcaactat gcgctgggta ttgtgatcgc aaatgggcaa aacaataaaa caacgatggc
     4441 cacttactct ctcatagtgg cattgatatc caacctggga acgctagcgt attataaata
     4501 cgccaactgg cgtatagaca acatttccaa tatcactggg catcgttggc ggccctggat
     4561 gtgatgctgc tgatcggcat ctcgttcttt acgcaaatcg catttttgac gactgccatg
     4621 ctggaaaggt gcgcgaaaca aagttcattg actatttatt gttcgtcact ttttttccca
     4681 cctcatagcc ggaccaattc ttcaccacag cgagatgatg ccgcagtttg ccgacacggg
     4741 caacaaaaca ccgacgttga aaaactgtgt ccttggccgg atcatgtttc tgatcggagt
     4801 tgcaaagaaa ttgctgctgg cggccggcgt atccgtattc gttgctccgg tcttctggtt
     4861 ttggtaggca atctggcagg ggccatttaa cgcggtacgg taacggcttt ttcggccgcg
     4921 agttcgccaa ggagatttgc ggcttgctga cgcggtgaga acatgccggc cctcgacaag
     4981 cgaagcctat catgtagagc acgtcgggat cgcgcatgac ccgtattgtg atcgaagaag
     5041 accatttcct gaagatcgtg ccggttgtcc tcgaccccgc cacgccggag gcgcatcgac
     5101 gggcagtggc gggttttttc gcccatgacg agccggattt cctgggttgg tgcagccggc
     5161 tgcaggggcg gttgtctggt ctctacccgg ccgaggtggt gttcgccgcg gacgaggccg
     5221 accttaaggc gaagatcgct gatgccgacg gcgttgtggt ggagagcttc cgcatcagcg
     5281 atgccctact gtctgcggcg tcgcggctcg ctatcgtgca taagttcggc accatcacga
     5341 caaacatcga tgttgcggca tgtgccaggc gaggcattgt ggtcgcaacc ttgcgccgca
     5401 tggtgaacgt agcagtggcc gagcaagcct gcgcctttat gctggcgctt gccaaacgca
     5461 tcggcgaatt caatggcctg gtggaagaga ccgcgctgcg gaatgccggc ttgcgggtgc
     5521 ggccacgaca gggccgctac atcgggtatt cgaactttgc cgggatcacc gggctcaaga
     5581 ccctgctagg tgcgacgctg ggcgtcgtcg gcttcggtga gatcggccgt gaggtagcgc
     5641 gccgtgcccg cgccttcgag atggaagtgg tgtatttcca gcgctcgccg ctcgcctcgg
     5701 cgctcgagca ggaactcggc gtccgttacc tgccgctgag cgacctgatg gcgcaagcag
     5761 actatatttt ggtgcagttg ccttccactg cttcgactcg cggcctgata gggcgggatg
     5821 cgctcgggcg catcaagccc ggcgccgtgt tgatcgacgt tgcccggccc gaattgatcg
     5881 accatgatgc ccttgtggat acgcttgaat ccggccgcct cggcgggctc gggctcgatg
     5941 tgctctacag cgagcccgcc gagccatcgg agccgctgtt gcgctaccgc gaccgcaacg
     6001 tcatcctgat gccgcacacc gccatcgggg cgcgggccaa tgcgttgcgt gacgtggaaa
     6061 gcctgtgcgt cgagctgtgg cgggcgatag cttcaccacc tgatacgcac atccgatagt
     6121 gcatcaaagt gttcatcccg gctgagaatt ggcaatcggt gctgaattgc aagggccgcg
     6181 atccaggcgt cgtttgccga gatcggtcga cccagccgtt ttagtgtggt cgtttccgcg
     6241 gtaatcgcca acaggtcgaa gtggcgaaga tgggtcgcaa gccatttctc gtaaatcttc
     6301 cgatgcttcg aacccatgat gccgtatcga aattaaccaa ca
//
LOCUS       DATILV010000504         2254 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4461984, whole genome shotgun sequence.
ACCESSION   DATILV010000504 DATILV010000000
VERSION     DATILV010000504.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2254
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4461984"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..588
                     /locus_tag="VLJ17_11425"
     CDS             <1..588
                     /locus_tag="VLJ17_11425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018460148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malic enzyme-like NAD(P)-binding protein"
                     /protein_id="HSV23627.1"
                     /translation="IESIKPTTIIGVSTIGGAFNQKVVEAISRINERPVILALSNPTD
                     HAECTAEQAYTWSKGKAIYAAGVQFAPVKYNGQTFLPGQANNFYIFPAVGMAIYTTQA
                     KRVTDEMFIEAGQAVADQVSADLLKQGMLYPLQSNILEAEIQTAARVAKIVFDSGLAG
                     IERPKGDMVAFIRKHVYKPEYANSPASQTQTRRAA"
     gene            585..2090
                     /locus_tag="VLJ17_11430"
     CDS             585..2090
                     /locus_tag="VLJ17_11430"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018454328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004333 - fumarate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0006106 - fumarate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006108 - malate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HSV23628.1"
                     /translation="MITPKNLNTRPSQTGSSKNPRSSRPKVSTSKSSNGQFRVESDSL
                     GEVQVAADRLWGAQTQRSLEHFSIGKHLIPREMIEAYATLKKGAAIANHAGNRLDDER
                     FRLIVQTCDEILACQHHEMFPLHVWMTGSGTQFNMNVNEVISNRCCQLARTPLGSKTP
                     VHPNDHVNMSQSSNDSFPSAMNIAAAVNVNELLIPAVKALRDAITAKAEQWKDVVKIG
                     RTHMQDATPLTLGQEWSGYAGMLTDNLDRIGYALKGVYRLALGGTAVGTGINAAPGFG
                     EAAAAEIAKLTKLPFVSAPNKFAVQGAHDDLVALSGTLRTLAVSLYKIANDIRLMSCG
                     PRAGFAELIIPANEPGSSIMPGKVNPTQAEALSMISVQVMANDVAVGFGGAGGYLEMN
                     VYKPLIISNITDSIRILREGCTNFRKFLIEGTKPNLKKIKEYVDRSLMLVTALSPVIG
                     YDKSSKIAHYALDNDLTLKEAALKLGFVTEDVFNQVVDPAKMVKPYVAKAN"
BASE COUNT          551 a          630 c          621 g          452 t
ORIGIN      
        1 atcgagagca tcaagccgac aacgattatc ggcgtaagca ctatcggcgg cgcattcaat
       61 cagaaggtgg tcgaagcgat ctcgcgtatt aacgagcggc cggtcattct ggctctgtcg
      121 aatcccactg accacgccga gtgcacggcc gagcaagctt atacctggtc gaagggtaag
      181 gcgatttacg cggctggtgt ccagttcgcg ccggttaagt ataacggtca gaccttcctg
      241 ccgggacaag ctaacaactt ctacatcttc ccggcggtcg gcatggcgat ctacactacc
      301 caggcgaagc gcgtgaccga tgagatgttc atcgaggctg gacaagcggt ggcggaccag
      361 gtctcggctg acttactcaa acaaggcatg ctctacccgt tacagtcgaa tattctcgag
      421 gctgagattc agactgctgc gcgcgtcgcg aagatagtct tcgattcggg cctcgctggc
      481 atcgaacgtc ccaagggcga catggtcgca ttcattcgta aacacgttta caagccggaa
      541 tacgcaaaca gcccggcgtc gcagactcaa actcggaggg cagcatgatt acacccaaaa
      601 atcttaacac tcgaccaagc caaaccggct cgtcgaagaa tcccagaagt tccagaccca
      661 aggtaagcac aagcaaatcc agtaacggcc agttccgcgt cgaatccgat tcgttaggcg
      721 aagtccaagt tgcagcggat cgtttgtggg gcgctcaaac ccagcgttcg ctggagcatt
      781 tcagcatcgg aaagcatctg atcccacgag agatgatcga ggcctacgcc acattgaaga
      841 aaggtgcggc cattgccaat catgccggga atcggctcga cgacgagcgc ttccgactca
      901 ttgtgcagac ctgcgatgag attctcgctt gccaacacca tgagatgttt ccactgcacg
      961 tgtggatgac tggcagcgga actcagttta acatgaacgt gaacgaggtc atctccaatc
     1021 gctgttgcca gctcgctcgc accccgcttg ggagcaagac gcctgtccat cccaacgatc
     1081 acgtcaacat gtcgcaatcg tccaatgatt ccttcccctc tgcgatgaac atcgcggcgg
     1141 cagtgaacgt caacgaacta ttgataccag cggtaaaggc gctgcgcgat gcaatcaccg
     1201 cgaaggccga gcaatggaaa gacgtggtca agatcggccg cactcatatg caggatgcaa
     1261 cgccgctgac acttggacag gaatggtcag gctatgccgg catgctcacc gacaatctcg
     1321 atcgcatcgg gtatgcgctg aaaggagtgt atcgcctcgc gctcggcggc acagccgttg
     1381 gcactggcat caatgccgcg ccgggattcg gggaagcggc cgctgctgaa attgcgaaac
     1441 tcacaaagct gccgttcgtt agtgcaccta acaagttcgc ggtgcagggt gcgcacgatg
     1501 atctggtggc gctctccggc acgcttcgga cgctggcagt gtcgctctac aagattgcca
     1561 atgacatccg attgatgtcg tgcgggccgc gagccggttt tgccgagctg atcatccccg
     1621 ctaacgagcc gggctcatcg atcatgccag ggaaggtaaa tccgacgcaa gctgaagcac
     1681 tgagtatgat ctccgtgcaa gtcatggcca acgatgtggc ggtgggtttc ggcggcgctg
     1741 gtggttatct ggaaatgaac gtttacaagc cgctaatcat ctccaacatc accgattcga
     1801 tcaggatctt gagagagggc tgcacgaact tccggaagtt tctgatcgaa ggcacaaagc
     1861 ctaacctgaa gaagattaaa gagtatgttg atcgctccct aatgctggtg acggcgcttt
     1921 cgcccgttat tggttacgac aaatcctcca agatcgcgca ctacgccttg gacaacgacc
     1981 taacgctcaa ggaagccgca ctcaagctgg gtttcgtaac cgaagacgtg ttcaatcaag
     2041 tcgtcgatcc agcaaagatg gtgaagcctt acgtggcgaa agcgaactga tcgggaccac
     2101 agcttctgac tcgacacagt taggcagaaa gcagaaaaga ggtgctatcc ggagtgaacc
     2161 atgcgaacgc cggttggcaa aacccttatt acgatgtcgg ccgcgttgtt cgccttcgcc
     2221 gaccacgcct atccccagac ttcgataggt gaaa
//
LOCUS       DATILV010000505         2675 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_373405, whole genome shotgun sequence.
ACCESSION   DATILV010000505 DATILV010000000
VERSION     DATILV010000505.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2675)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2675)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2675
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_373405"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            401..1390
                     /locus_tag="VLJ17_11435"
     CDS             401..1390
                     /locus_tag="VLJ17_11435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HSV23629.1"
                     /translation="MIVRAHAQAKPPEPIEKAKKAVETLINRLRGRDMPEGIVKTNGR
                     IEATQVDVSAKYPGRLATLTVDEGDEVTAGQQVATISSPETEAQLRSAQAQVLKTRQA
                     KAEAIALIAQRDSELTFSRTDYERGKTLLQKGDIAQQVVDQRRNRFEAAEAGYVAANA
                     QRDQAESSIKSAEAEVERLQSILVDLVLVSPRSGRVQYRLARAGEVVSAGQRILTVLD
                     LNDVYMTIYLPAEQAGRLTIGDQARTILDPIPQYVLPNTVSFVATEAQFTPKSVETTE
                     EREKLMFRVKLQADPKVLDQYHKSVKTGVRGLAFVRTDPKIGWPAELEVKLPQ"
     gene            1387..>2675
                     /locus_tag="VLJ17_11440"
     CDS             1387..>2675
                     /locus_tag="VLJ17_11440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSV23630.1"
                     /translation="MTSPIVASIEHVTHRYGKTFALNDLALEIPARCMAGLIGPDGVG
                     KSTLLALIAGVRKIQTGKVIVLDGNMADEHHRRASYGRVAYMPQGLGRNLYPTLSVFD
                     NVDFFGRLFGQGAAERRTRIDDLLKATGLDPFGDRPCGKLSGGMKQKVSLCCSLMHDP
                     DLLILDEPTTGVDPLSRRQFWQLIDSIRARREQMSVLVATAYMDEASRFDWLAAMDDG
                     KVIAHGAPKEILAEAKKSTLDDAFIALLPPEKRGQHQEVIVPPRTESDDKTAAIETEG
                     LTRRFGDFVAVDHVSVRIERGEIFGFLGSNGCGKTTTMKMMTGLLPVTEGSAKLFGKP
                     MAADDMEARQNVGYMSQAFSLYSELTVRQNLELHAHLYHLPPNEIESRLTELLERYDL
                     KDVADAKPESLPLGVKQRLQLAVAVLHRPPMLILDEPT"
BASE COUNT          563 a          806 c          817 g          489 t
ORIGIN      
        1 ccccaagcat gaggggtgca ttcatcttgt atttttatag ttgaccgtga gctgaaatac
       61 tttgatcaag atcaatcgat cgcctgcccc atctgcgatg gttcaattcg cgccaatcgg
      121 gctgcccagg aggcattgaa gtgagactac cggctcgccg ataagtcgaa gcatcgatca
      181 gccgagggaa cgccgggcag tacgtcgccg atggcaggtt cgaaccgagt aggagaacat
      241 cgtgcctgca gattctgtat cgtcacgagg attgaagttg ctccgggtga ctgcgcagcg
      301 gccgctccgc ttcgtccgta ccgttgtcct gggaaccgct ctgatttgcg ccgcaccgtt
      361 agtggtcaca tccgcactgg gcatctctga cgacggcctt ttgattgtca gggcccatgc
      421 ccaagcgaag ccgccagagc ctatcgaaaa agccaagaag gcggtcgaaa cgctgataaa
      481 tcgcctgcgt ggccgcgaca tgcccgaggg gatcgtgaaa accaacggtc gcattgaagc
      541 gacgcaagtg gatgtgtcgg cgaaatatcc gggccggctg gccacgctca ccgttgacga
      601 gggcgacgag gtcaccgccg ggcagcaggt tgcgaccatt tcctcaccgg aaaccgaagc
      661 ccagttgcgc tccgcgcagg cgcaggttct gaaaaccagg caggcaaagg ccgaagccat
      721 tgccctcatt gcgcagcggg acagcgagct gacattctcg agaaccgatt atgagcgtgg
      781 aaagactttg ctgcaaaagg gggatatcgc gcagcaggtc gtcgatcagc gccgcaaccg
      841 attcgaagcc gccgaggcgg gatatgttgc agcgaatgcc cagcgcgatc aggcggaatc
      901 ctcgatcaag tcggccgagg ctgaggtcga acggctgcaa tcgattctgg tcgatctcgt
      961 gttggtctcg ccgcggagcg ggcgcgtgca atatcggctc gcccgagccg gcgaagtggt
     1021 ctccgcgggc cagcgcattc tgactgttct tgatctgaat gacgtctaca tgaccatcta
     1081 tttgccggca gagcaggcgg gcaggcttac gattggagat caggccagaa ccattctcga
     1141 tccgatcccg caatatgtcc tccccaacac tgtcagcttt gtggcaaccg aggcgcagtt
     1201 cacacccaag agcgtcgaga ccacagagga gcgggagaag ctgatgttcc gcgtcaagct
     1261 ccaggccgac cccaaggtgt tggatcaata tcacaagtct gtaaaaacgg gcgttcgcgg
     1321 cctcgccttc gtgcgcaccg atcccaagat cggctggccc gccgagcttg aagtgaagct
     1381 tccgcaatga ccagtcccat cgttgccagc atcgagcatg taacgcaccg ctacggaaag
     1441 acgttcgcgc tgaacgacct cgccctcgag attcctgccc ggtgcatggc gggattgatt
     1501 gggcccgacg gcgtcggcaa gtccaccttg ctcgccctca tcgctggcgt gcgcaagatt
     1561 caaaccggca aagtcattgt gctcgacggc aacatggcgg atgagcacca tcgccgggcg
     1621 agttacggcc gcgttgccta catgccgcag gggttgggcc gcaatctcta tccgacgctc
     1681 agcgtgttcg acaacgtcga cttcttcggc cgcctgttcg gccagggcgc ggccgagcgt
     1741 cgcacgcgca tcgacgacct gctgaaagcc acgggactcg acccgttcgg agatcggcca
     1801 tgcggcaagc tctcgggcgg catgaagcag aaagtcagcc tctgctgctc gctgatgcat
     1861 gatcccgatc tccttatcct cgatgagccc accacgggcg tcgatccgct ctcgcgccgg
     1921 cagttctggc aactgatcga ttcaatccgg gcgcgtcgcg agcaaatgag cgtgctcgtc
     1981 gcaaccgcgt acatggacga ggcaagccgg ttcgactggc tcgccgcgat ggatgacggc
     2041 aaggtcatcg cgcatggcgc gccgaaggag atcctcgccg aggcgaaaaa gagcacgctc
     2101 gacgatgcct tcattgcact gcttccgccg gaaaagcgcg gccagcatca ggaggtcatc
     2161 gtgccgccac gtactgaaag cgatgacaag acggcggcga tcgagacgga agggctgacg
     2221 cgccggttcg gcgatttcgt cgccgtcgat catgtgagcg ttcgcatcga acgcggagag
     2281 attttcgggt tcctcggctc gaacggctgc ggaaaaacca ccaccatgaa aatgatgacg
     2341 gggctgttgc cggtcactga aggctcggcc aaactgttcg gcaagccgat ggcggccgac
     2401 gatatggagg cgcgtcagaa cgtcggctac atgtcgcagg cgttctcgct ctacagcgag
     2461 ctcacggtgc ggcagaatct cgagctgcac gcacaccttt accatctccc tccaaacgag
     2521 atcgaaagcc gcttaaccga gctgctggaa cgatatgacc tgaaggatgt ggccgacgcc
     2581 aagccggaaa gtctgccgct tggcgtcaag cagcggctac agttagcggt ggcggttctc
     2641 caccggccgc ccatgctcat tctggacgag cccac
//
LOCUS       DATILV010000506         3158 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_116870, whole genome shotgun sequence.
ACCESSION   DATILV010000506 DATILV010000000
VERSION     DATILV010000506.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3158
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116870"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(188..523)
                     /locus_tag="VLJ17_11445"
     CDS             complement(188..523)
                     /locus_tag="VLJ17_11445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23631.1"
                     /translation="MEPNHLRRVLQLDAATCLAAAGGDADLREGLGPMLAIPVQISGR
                     EVLTASRRDVILLAAVAVSALGLDRSLAIVAPASDKMMICGSHFPWPGLGKIARDGAG
                     YALTTVQST"
     gene            659..919
                     /locus_tag="VLJ17_11450"
                     /pseudo
     CDS             659..919
                     /locus_tag="VLJ17_11450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019172200.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
     gene            complement(2388..2612)
                     /locus_tag="VLJ17_11455"
     CDS             complement(2388..2612)
                     /locus_tag="VLJ17_11455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23632.1"
                     /translation="MLLIYCGIGLAVPGPSILILTLPLAIVIRCGVVAREEAYLERRF
                     GDAYRGYKARMRAVTPGSNQVVAGESARLD"
     gene            2688..>3158
                     /locus_tag="VLJ17_11460"
     CDS             2688..>3158
                     /locus_tag="VLJ17_11460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23633.1"
                     /translation="MAGKQSEINRRLGRDRQPPEAMRAPIHCLQGLINQVGEDHAANP
                     GITARHCRARTVACPIETLLLHGVIPTVTPAALPQLVRHQALEAKVSGDLYMPVKADG
                     PVPALVLKHGSGGLQGPIGTNIRNWAATFTGWGIAAFVVDSFGPRGITSTGADQS"
BASE COUNT          656 a          956 c          895 g          651 t
ORIGIN      
        1 tcatccgcat tagcgccaag cagctcataa agcgatttca tcggtgcgct ctcgatctgt
       61 tggatggaat cgccggaaaa cctagcatgc tctcagcacc gaaaaatccg cgcggccaaa
      121 ctaattccct taattatggt attgaccggc gcgtccgaag aacgccagcc aattacttgg
      181 agggtagcta cgtgctttgc acagttgtta gcgcgtaacc ggcaccgtcc cttgcgatct
      241 tgccaagtcc gggccagggg aagtgggaac cgcagatcat catcttgtcg gatgccggcg
      301 cgactatggc caaacttctg tcgaggccaa gcgcagacac ggcgacggcc gccaacaaaa
      361 taacgtctcg tcgtgaagct gtaagcactt cacgccctga aatttggaca ggtatcgcca
      421 gcatgggccc gagcccctcg cgcaggtcgg catcaccccc cgccgccgca aggcaggtgg
      481 ccgcatcgag ttgcagaacg cgccgcagat gatttggttc catttcattg tcatcactca
      541 actcctggcg aggcaccgag ccggattggc ttcggagcca aaatgcctcc agcctcttga
      601 ggcgtcgatt acctcggagg tacttcaatg gagtgcacgc cctggccagt taggcgacat
      661 ggttcacgcc caaccgagct tcggcagtct gttgcgcgat tggcgccggc gcatgagcca
      721 gctcgagctc gcgacaacgg ctgagatttc acagcgccat ttgagcttcg tcgaatcagg
      781 ccggtcgcga ctgagccgcg acatggtcat tcgactgtcg gatcaccttt cggtgccctt
      841 gcgggagcgc aataccctga tgatcgccgc ggccttcgca ctgatccacc aggagcgtgc
      901 cctcatcgat ccggccgtgc ctaccgtaaa tcctatccat tggcacattc aaccgaatcg
      961 ggtgatgttc gtgctcgatg aatactttcg agctgatttt acgcgccttg gtcagactgt
     1021 tgcgctcgaa ggcggcgctt caggctgagg tcctggtcct ccgtcaccag ctcaaccttc
     1081 tacgccgcaa gtcgccaaag aggttcgttc tgaccggcgc tgaccgagcg gtctttgtcc
     1141 ccctctattg cctcgtcccg gtgtgatcga tgccctcgcg atcatttgac cgcaaacggt
     1201 gatccggtgg caccgtgccg gatttcgccg cttctggcgc tgggcccgaa cgagatttat
     1261 aacgatagct ttgacggcca ctccctccgc cagaaatcaa tttcggcaac ctcgcccgcc
     1321 tcgctttcat taacgaaatt gttgatatcg gaaggcaatt agcatcttgt ggcatctgta
     1381 ctcattgccg cccttcgcta ccatactcgc cctcgacgtg ggtaatctcg tgagtagcca
     1441 agtctgacgg tctgcgtgga ggcgtggctc agcactctgc aaacggatcg gacagcccga
     1501 gcgaagcggc attttttttt gacaatacgc tttaataaaa tgacgacgaa ccaatttcct
     1561 tggttaaccg tccgccatgc tgggtggagc gcggcagccg caccgtcagg cagactgcgg
     1621 cttctgggtt agcccgttcc accgccaggg cggcagttac acgaggcgcg aggccggatg
     1681 atcgttgatc cagctcagac tcttgtgtca actgggggat ttcggcactt gtcgagggca
     1741 ccgctcgatc agcgcaggat cggctccaat catcaatatc tttcagctcc aaatggcctg
     1801 cggaccgaaa cgagcgcggt gaatgcacag cgctcatcaa gctttgtttc gagcgctgtg
     1861 ccgtcttcgt acgccggtta ataccctccg tagctatacc gataataggg ccggtggtgg
     1921 tagccgtaac ggtagtagtg tcgatggtag tatccatgtc catagtatgg cctgtggtag
     1981 ccgtagccat agtaacgggc agatgccggg acagatgccg caattgcgag acccacaccc
     2041 aggaccgcca ttgctgtgta ctttctggtg ctcaacatgg tttttactcc tgcgaaaaat
     2101 attctgcttc cgaagttgct gttggacaac gtcgaaaacc ccattgagcc agcatcgggg
     2161 tgtaagacgc gacgccacga gaactcaagc gaaacagaac tattgaaaca atttactggg
     2221 gcgccgctag ttcccagttc cgtggaccca acccatcaaa catggcctag ggaacattca
     2281 cagcgacgcc cagaggttga aacatcccag gcgcgtttac gcctgctgca ccgcgcaacg
     2341 aacgtcaccg tcgcatcgct ggcgagcgaa cgtcggcatt gagctactta gtccagccga
     2401 gcgctttcgc cagcaaccac ctgattgctt ccgggcgtga cggcgcgcat gcgggccttg
     2461 taaccccgat aagcatcgcc gaaccgccgt tctaggtacg cctcttcgcg tgcgacaacg
     2521 ccgcagcgga tgacgattgc aaggggtagc gtaagaatga ggatcgacgg gccgggcaca
     2581 gctaagccga tgccacagta gataagaagc atgccgaggt agattgttcg ctccagacct
     2641 gcccggcggg acgtgccgaa ctccccttca gcgcggcgat cacaccgttg gcgggcaagc
     2701 agtcggaaat caatcgaaga ctgggtcgcg accggcagcc gccggaagct atgcgggcgc
     2761 caattcactg cttacaaggg ctgatcaatc aggttggaga agaccatgcc gcaaatcctg
     2821 gcatcacggc gcgccactgt cgcgctcgca ctgttgcttg cccaatcgaa acgctgctct
     2881 tgcacggtgt aattcctacc gtgacgccgg cggcgctgcc ccagctcgtg cgccaccagg
     2941 cactggaggc gaaggtgtcc ggcgaccttt acatgccggt gaaggcggac ggtccggtac
     3001 cagcgctggt gctcaagcac ggaagcggcg ggctgcaggg tccaatcggc accaatatcc
     3061 gcaattgggc cgcgactttc acgggctggg gcatcgccgc cttcgtggtc gacagcttcg
     3121 gcccgcgcgg gataacttca actggggccg accaaagc
//
LOCUS       DATILV010000507         5899 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4462610, whole genome shotgun sequence.
ACCESSION   DATILV010000507 DATILV010000000
VERSION     DATILV010000507.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5899)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5899)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5899
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4462610"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..205
                     /locus_tag="VLJ17_11465"
     CDS             <1..205
                     /locus_tag="VLJ17_11465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23634.1"
                     /translation="FRRGQRFASTTAVTQMTRAFVRNIDQIADRFGYLLAERSQSGTA
                     HGQSTRAAETAVNKYYQHEKLAA"
     gene            complement(494..685)
                     /locus_tag="VLJ17_11470"
     CDS             complement(494..685)
                     /locus_tag="VLJ17_11470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23635.1"
                     /translation="MRFDVPEMTVLISDKSAECSGIIALVSDKLGYDGIKLTRVSATT
                     QSAVLPDASTKVHGRQQKD"
     gene            1008..2324
                     /locus_tag="VLJ17_11475"
     CDS             1008..2324
                     /locus_tag="VLJ17_11475"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S53 family peptidase"
                     /protein_id="HSV23636.1"
                     /translation="MYTTASPLDVLVRSGLVLTALMLCAPASAQDIKPLNFDSNFTVR
                     VLKNGAIITPSSSNPQVSAGGVRAHTNVHIFQHNSMPTTKAVRANSGPPVAGYFYETP
                     ASLACVYNLAAQISGCNPNVVSTVPIGGSRAIAIVDAYHAPNALADLTAFSRQFGLPL
                     PTASTFQVVYSQSNGTPTTRAPAYDSGWEVEISLDIQWAHAMAPNAKIILVEAASSSL
                     ADLLGAERLAGQLVAAAGGGQVTNSWGANEFPQETSFDNYFAINGVVYFASTGDNPGT
                     EWPSVSQNVVAVGGTSVSRNPVTGVFEGEAAWDNGGGGQSLYVARPAYQSPVASVIGG
                     TMRGVPDVAAIANPNTGVWVYDFNAGGWIVVGGTSVASPVVAGITNNAGHFSVSTVAE
                     LTRLYTQTNRFFDVTRGVCGPYAGYFAQSGWDFCTGIGSPAVKGEM"
     gene            2413..2694
                     /locus_tag="VLJ17_11480"
     CDS             2413..2694
                     /locus_tag="VLJ17_11480"
                     /inference="COORDINATES: protein motif:HMM:NF039792.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6471 domain-containing protein"
                     /protein_id="HSV23637.1"
                     /translation="MRGRTALARADIGYRELAERLQEHGLKETEASVANKISRERFDS
                     QVHWMRRVRFFNFAPDSQAKHACRQAEIPLKALSKIPEPPLVTPHPSAE"
     gene            complement(2802..3188)
                     /locus_tag="VLJ17_11485"
     CDS             complement(2802..3188)
                     /locus_tag="VLJ17_11485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23638.1"
                     /translation="MTRTELVLMALTTALLLPAPSAHAGCIGHRVFAVPNGVTNVEGG
                     TRAGQPCEIAFGLGGDIEALQIIVRPSHGVVGTSAKEGNRRYIAYVPSAGFVGSDRFE
                     ADVRYRPPGRTSSLMTRYKVEMHVTP"
     gene            4550..4921
                     /locus_tag="VLJ17_11490"
     CDS             4550..4921
                     /locus_tag="VLJ17_11490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23639.1"
                     /translation="MEPIPPMTLGNMRANGVRSLSVYCIAGHHEAVLDVERWPDHVLV
                     PRMFRTHCRMIGADARPNWKEHRPRESLTGTQWRNSKSSRPRHRARPARWGVYRAATK
                     AKWIGTVEAPIADAAIKAAAR"
     gene            4967..5782
                     /locus_tag="VLJ17_11495"
     CDS             4967..5782
                     /locus_tag="VLJ17_11495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23640.1"
                     /translation="MDIDQSHLLPPPNVLLRSAKAQVDCANRIKFEDRRMVLNRGLES
                     EVAPFGYANLLGPEFFERVMSLGGLIWWDGGSGHLRAQVDLVNKYRALRLPLPSLVAT
                     TTIIDLETIKAMAKLSAVYSQQKEATLTFIRGNIELLRDVKISNVGLGSDVLGDSTYS
                     QHPDRVFAKYFLPLKLGCKIFAYVPGKANLYVSDGNDEHWSYDGLQKWLDSFIGVHSD
                     LNKYFQWGQVISFERLERVVYIPPLKLLLYIPGSPPIRIFEPAISAARPLRRR"
BASE COUNT         1248 a         1710 c         1650 g         1291 t
ORIGIN      
        1 gttccgccgg ggccagcgtt ttgcctcgac cacggctgtg acgcagatga caagagcttt
       61 cgttcgcaac atcgatcaaa tcgcggaccg gtttggctat cttctcgccg agcgcagcca
      121 atccggaact gcccatggcc aatctactag ggccgccgaa accgccgtca acaaatacta
      181 ccagcatgaa aaactcgcag cataaaaact tgacgcaact gccccacaaa gcggttaatc
      241 gaggaaacta gggcttcgtc acaagtggat ttggatttac tgctgatctt tcacggcatg
      301 actgcccgtc agacggtgga attgttcaag gccgggcccc gctgccctga gcgctgcatt
      361 gagggcgctc aacagtgttg cagtttccat tatctttgtc gccataaagt ccggaagttg
      421 tagtcgcaat gcattgcaaa ccaagttgat ggcgaccaac ctctctcgac gttttcctga
      481 agctcgcgat cgctcaatcc ttctgctgtc ggccgtggac cttcgtgctg gcgtccggca
      541 acaccgccga ttgcgtggtg gcggacacgc gcgtgagctt gattccgtca taaccgagct
      601 tgtcgctgac aagggctatg ataccactgc attccgcgct tttgtcggaa atcaagaccg
      661 tcatctcggg aacatcgaat cgcaagaagc gcatccgtta cgacaagcaa ggctgcaaag
      721 aacgccacgt cattgagcgc tgcttctgtc gtctcaaggg ctggcaacgc atcgcgacac
      781 gctacgacaa actcgggcga aattcctctc cgcattgtgc ttcgtcccta tgcttgccta
      841 ctggcgttgg tttaattgag tccagactca aaaactcttt agatcgttgc aactcttttt
      901 taaaaggtag tgatcataaa atatattcgt attgcccgct cagccagagc agggcctcat
      961 tccacggcgc tatccggcgc gcgagatcta tcaggacacc tcagcagatg tacacgaccg
     1021 cctcgccact tgatgttctg gtccggtcag gattagtgct tacggccttg atgctttgtg
     1081 ctcccgcctc ggcacaagat attaagccat taaattttga ttccaatttc acggtgcgtg
     1141 tccttaaaaa tggcgctatc attacgccgt cctcgtccaa tccgcaggtc agcgctggcg
     1201 gcgtgcgggc gcacaccaat gttcatattt tccagcataa cagcatgccg acgaccaaag
     1261 ccgtgcgcgc taattccggg cctccggtgg cgggttactt ctacgaaacc cccgcatcgc
     1321 tggcgtgcgt ttacaatctc gcagcccaaa tctcgggctg caatcccaac gtcgtgtcga
     1381 cggtgccgat tggaggtagc cgggcgatcg ctatcgtcga cgcctatcac gcgccaaatg
     1441 cccttgcgga ccttaccgcg ttcagccggc agtttgggct tccgttgcca accgcctcga
     1501 ccttccaagt cgtgtattcc caaagcaacg gaacgccgac gaccagggct cccgcgtatg
     1561 attcgggctg ggaagtcgag atctcgctcg acatccagtg ggcgcatgcg atggcgccca
     1621 acgcaaagat catcctggtc gaggcggctt cgagttcact ggccgatctt cttggggcgg
     1681 agcgtctggc cggccagctg gtagcggcgg ccggcggcgg acaggtgacc aacagctggg
     1741 gggccaacga atttccgcag gaaacgtcgt tcgataacta ctttgcaatc aacggggtcg
     1801 tctattttgc ctccaccggt gacaatcccg gcacggagtg gccgtcggtt tcccaaaacg
     1861 tcgtcgcagt cggtggcacc agcgtatcgc gcaacccggt gaccggcgta ttcgaaggag
     1921 aagcggcgtg ggacaacggc ggcggtgggc agagcctcta cgtcgcgcgg cccgcctatc
     1981 agagccctgt tgccagcgtt attggcggca ccatgcgcgg cgtgcctgac gtcgccgcaa
     2041 tcgccaatcc gaacaccgga gtctgggttt atgacttcaa tgcgggcggc tggatcgtgg
     2101 tcgggggtac cagcgtcgct tcgccggtgg tcgctggaat caccaacaac gcgggccatt
     2161 tcagcgtgtc aacagttgcc gagctgacgc gactctacac gcagacgaac cggtttttcg
     2221 atgtcacgcg cggcgtgtgt ggtccctatg cgggctattt cgctcaaagc ggctgggatt
     2281 tctgcacggg cataggctcc cccgccgtca agggcgagat gtaagagctg tcctcccgga
     2341 gaatcgtatc cgcgcgtggg gatgctggaa tcctgctcgg attgatatgc tgacgaagag
     2401 ccagctcttt tcgtgcgagg ccgcacggca ctggcgcgag ccgatattgg ctatcgcgag
     2461 ctggccgaac ggctgcagga gcatggccta aaggaaacgg aagcgtcggt cgccaacaag
     2521 atcagccggg aacgtttcga ctctcaagtc cattggatgc ggcgagttcg tttcttcaac
     2581 ttcgctcctg attcgcaggc aaaacatgcc tgccgtcagg ccgagattcc gcttaaggcc
     2641 ctgtccaaaa tcccggagcc acctcttgtg accccgcatc cgagtgccga atgaattgcc
     2701 cgtcaattga ccgaggcctg cggctgggct ggccgttggc cgcgttcttt gtctgcctat
     2761 cctgggcgga ttgcatcatc ggtgacgaca gggacaacgg ctcatggcgt gacatgcatt
     2821 tcaactttgt atcgtgtcat caatgacgac gtgcggcctg gaggcctgta tcgcacatcg
     2881 gcctcgaatc gatcgcttcc gacgaatccg gccgacggca cataggcgat atagcgcctg
     2941 tttccttcct tcgcagacgt accgacaaca ccgtgcgacg gccgtacaat gatctgaagc
     3001 gcttcaatgt cgccgcccaa gccgaatgca atctcgcaag gctgacccgc gcgcgtgcct
     3061 ccttcgacat ttgttacgcc gttggggaca gcaaagacgc gatgaccgat acatccggcg
     3121 tgtgccgatg gggccggtag aagcaacgcc gtggtgagcg ccatcagaac caattccgtt
     3181 cgcgtcatgc gtcgcatcct ctgaagatcg ttgtctctgg agtgtcaggt cggaggaggc
     3241 gcccaccgag gggcttgcct ccgaccgccg ctcaaactgg acgtgcggtt ttcccgcatc
     3301 cagctttcat gaacgtgctt tcgcggtctg aagagaaggt attagtgcga caaggctgac
     3361 cagcttgaac tccgcacgca gccttttcgt aggatattcc ttccagcctg aattccgccg
     3421 tcgcatagtg cgatgcgact tgctgtaatc cagcatgatc tgaacccgta gtaaatattg
     3481 ccgtatgcat cataggttat aggtagaacc tgttgctgtg taagccttga ctcagccttg
     3541 gcgtgctcga tggcgtttgc catcgcgaag atggggagcg ctccgccgtg atcaccgtga
     3601 gcgcggtcaa acagatgagg tcgagccctc agatgatgag gacgagcggg aagccgcgct
     3661 cgcccgagca ccggcggcaa ggcccgacag acgatcgcta ctcactgcaa cagtgcacgc
     3721 ctagccgatc gcgccgcagg atatctacgt catcgaacgg agacaccatc cgcggtgcac
     3781 ggcaagacaa tcccacttct cggctttgac tctccggagc ttggtggccg cgccctctgc
     3841 gggaaagaat gctggcaccg cacgctacct cgcggcaaac gtcgcgtcgc cgccaggcgt
     3901 cgccggcgta accgccgctg cgaaaggttt tcggtaggaa catgttagag cctcactgcc
     3961 ttcacatcaa atcgaatgct gagcgccccc tcgccgccca ccttgccaag cgcgatgcca
     4021 tcctgttgct ataggcgacc gcccgtgcgt gctgttgctg gattaccggt gtggagaggg
     4081 tgagtgcaat cagcgtgcgt gccgcgccgg tgcagattct ggagcctaca gcccaaccga
     4141 tcaagcgcgc cgccgtgctc gggccggttt tggcaatgtg tgctactcac gttgagattt
     4201 tcagcaacat ggcccacagc cacaatgcta aatgtggtat gtcaccgtat ttttcgtagg
     4261 ttgtagcggt gacaccgtgc tcgctaaata tgggctatac ccgtattttg tccaggttga
     4321 acctgtaaca ccgcgctcgc ttttataaac ctgcccaata ggcaggttta attcttccac
     4381 aacaaattca atgaattgct ggccttcgtt tcatgatcgg gcaagtggcc catcttgaaa
     4441 tgccggttcc ctgcggcact tcgatctacc cttccgggag tgcggtgctt ccgacattgg
     4501 gacagactgc cgcgctgcgc ccttcccgcc gatggccgat atttgcgtca tggagccaat
     4561 tccgcccatg acgctcggaa acatgcgggc caacggagtc agatcgctct cggtgtactg
     4621 catcgctggc caccacgagg ctgtgctcga tgtcgaacgc tggcccgacc acgtcctggt
     4681 gccccgcatg tttcgcaccc actgccggat gatcggcgct gacgcccggc cgaattggaa
     4741 ggagcatcgc ccgcgggaaa gtctgacagg tactcaatgg cgaaactcca aaagctcgcg
     4801 gccaaggcac agggcgcgac cggcgcgatg gggcgtgtac cgcgccgcca ccaaggccaa
     4861 atggattggc accgtcgagg cgcccatcgc cgatgccgca atcaaggcgg ccgcgcgcta
     4921 acggagcggc ctcactgcgc aatgtagcca gttctgaaaa aatagaatgg atatcgacca
     4981 atctcacctg ctgccaccgc cgaacgtttt gctcagaagt gcaaaagctc aggttgattg
     5041 cgctaatcgg atcaagttcg aagacaggcg aatggtactg aatcgcggac ttgagtccga
     5101 agtagcgccc ttcggatatg ccaacctgct cggccccgag tttttcgaga gagtgatgtc
     5161 tttaggcgga ttaatatggt gggacggcgg aagtggtcat ttgcgtgctc aagtcgacct
     5221 cgtgaataaa tatcgcgcat tgcgtcttcc attgcctagc ctagttgcaa caacaactat
     5281 tatagacctg gagacgatta aggcgatggc aaaactaagt gctgtctata gccaacagaa
     5341 agaggcaacg ctcactttca tacgtggcaa tatcgagtta cttcgcgacg tcaaaattag
     5401 caatgtaggc cttggctcag atgtattggg tgattctacc tactcacagc accctgatcg
     5461 ggtgtttgcc aagtattttt taccactgaa actcggctgt aagattttcg cgtatgtgcc
     5521 tggtaaagcc aacttgtatg tatcagatgg taatgatgag cattggagct atgatggtct
     5581 tcaaaaatgg cttgatagtt tcattggagt tcattctgat ttaaataaat attttcagtg
     5641 gggccaagta atatcttttg aacgcctcga aagagtcgtt tatataccac cacttaaact
     5701 gttattatac ataccaggaa gcccgccgat caggatcttc gagcccgcca tctcagccgc
     5761 gcggcctctg cgtcggcgat gaattcgcgc agaagtgatc agcagccgcg tcaagtggct
     5821 gccatcgatg gcgagccggc gcagaaacat cacgacgagg gtgagcacga ccatgatggg
     5881 cagcaccatg gctaggatc
//
LOCUS       DATILV010000508         3232 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2164173, whole genome shotgun sequence.
ACCESSION   DATILV010000508 DATILV010000000
VERSION     DATILV010000508.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3232)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3232)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3232
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2164173"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..407
                     /locus_tag="VLJ17_11500"
     CDS             <1..407
                     /locus_tag="VLJ17_11500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23641.1"
                     /translation="MLFEGVFGQIERRGTALGVPFYEQPTLGGENTLRAFGRGRYVGT
                     WAVLANLEERVTVLNKTMFGVDTHLELAPFLDLGRVGQSSVKGENLFYKHLQFSPGVG
                     FRLLIKPTIVGRFDVAYGSDGANVFVGLDYPF"
     gene            1092..1490
                     /locus_tag="VLJ17_11505"
     CDS             1092..1490
                     /locus_tag="VLJ17_11505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018242333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1801 domain-containing protein"
                     /protein_id="HSV23642.1"
                     /translation="MKKSGSQKSKSPSQLIDARIKELGDWRGKMLSRLRTLVKEADPE
                     VVEEWKWRGVPVWSHDGLICTGETYKNVVKMTFAKGAALKDPSGLFNSSLDGNTRRAI
                     DFHEGEKIDEQALKTLVRAAVTLNKSTAQS"
     gene            1817..2614
                     /locus_tag="VLJ17_11510"
     CDS             1817..2614
                     /locus_tag="VLJ17_11510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017486254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015499 - formate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015724 - formate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HSV23643.1"
                     /translation="MAETGRRKLALAPRDLLIRGMLSGAILGVATSLAFTGAVQTNTP
                     LVGALIFPVGLIMIVLLGLELVTGSFALVPLPWLSREASASAVVVNWGWVFIGNLIGS
                     VAYGALIAIALTNMGTAAPAGVAARIVQVAEAKTIGYSAIGFAGMVTVFVKAMLCNWM
                     VCLAIVLAMTTNSVIGKIACAWMPVFVFFAQGFEHSVVNMFIIPTGMMMGAKVTVADW
                     WLWNQIPVTLGNLVGGFTFTGFAIYVTYKPRTVVKVLAPTPTGVPAE"
     gene            2680..>3232
                     /locus_tag="VLJ17_11515"
     CDS             2680..>3232
                     /locus_tag="VLJ17_11515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NirA family protein"
                     /protein_id="HSV23644.1"
                     /translation="MPSDFEPEQKRYLEGLMTGLQIAKTLRPAGGNGTAPVASTGPNG
                     DAASAPEPIGPDAAALCAQDRAIKAGGKLSDPEKFKRERHPFDAYERLKEQATKNEAP
                     KADDNFRWRFFGLFYCAPAQKSYMCRLRIPNGILNHWQFAGVADLAERYAGGYAHVTT
                     RANLQMREVEPKNAVAMVEAIQDL"
BASE COUNT          685 a          910 c          965 g          672 t
ORIGIN      
        1 gcatgctgtt cgaaggcgtg ttcggacaaa tagagcgccg gggcacagca ctcggtgtgc
       61 ctttttacga gcaacccacg ctaggcggcg aaaataccct tcgggctttc gggcgcggcc
      121 ggtacgtcgg cacctgggcc gtccttgcga atctagaaga acgagtgacc gtgctcaata
      181 aaacgatgtt cggtgtagat acccacctgg aacttgcccc gtttctcgac ctagggcggg
      241 taggacaaag tagtgtgaag ggtgaaaatc tgttctacaa gcatttacaa ttcagtccgg
      301 gcgttggttt tcgattgctg atcaaaccaa ccatcgtcgg gcggttcgac gtggcctatg
      361 ggagtgatgg ggcaaacgtg ttcgtaggac tagattatcc gttttaatat ttggggtgat
      421 gatgactcgc ggcgatgcag gtctctcctg ccgacaagtg ctgaagaagg caggacatgt
      481 tttcataaga gtcatactgt agtccgggaa ttctcccgca aatcggtgtc aaaatcaggg
      541 gccgaccaaa ttcaacggaa aggtttacag aggcccctct cgtcatgatg agttgtttgt
      601 cgcacgtatc aaagcgcgca gtgagtttat gacctgctcg gactgtaata caaccttttg
      661 atatttccca cttcagaagg gtttggttct tcgagttttg tcccctggaa acccctcaat
      721 aacccagttt tcgacccagt aattctaacc tcccctgacc gctctcacgc cttgtgcaaa
      781 agactgagcc ttccactaca aacatgctgg agcgagccca attgaagctg acgcggaaga
      841 cctgcacatg gttccgtttc ctgtcagcgc gcatcagaat gggggtaggc gtcacaatcc
      901 ttagcgtagg agttgtctct tcatgtcgat tttctgcggc catccgccta tcctctcgaa
      961 tcggtcaaaa agaaatgctt ttgaatggtt tcgataaccc aggcagccag attctgatag
     1021 atattgatat tgggcacggt ggcgatgacc ctcatttatc aaagcctcgg gactaaggag
     1081 gagaaacggg catgaagaag agcgggtcgc agaaaagcaa gtctccttct cagctgatag
     1141 acgcgagaat caaggagcta ggcgactggc ggggcaagat gctcagccgg ctccgtacct
     1201 tagtcaagga agccgatccc gaagtcgtcg aggagtggaa gtggagaggg gttccggtgt
     1261 ggtcgcacga cggattgatc tgcacaggcg agacttacaa gaacgtcgtg aaaatgacct
     1321 tcgccaaagg ggcggctctg aaggatcctt cgggcctctt caactccagt cttgacggga
     1381 acacaaggcg tgccatcgac ttccacgagg gcgagaagat tgacgagcag gcattgaaga
     1441 ctctcgttcg cgccgccgtg accctgaata agtccaccgc ccaaagctaa tccacggcgt
     1501 caaacatttt ccttaaggcg ccggccgctg ctcgaactgc ccgtatcttg tgcattgccc
     1561 aagtcgcagg cgcgatgcgg cttaaacgag cagacgcagg tctcattgcg ctaccgcccg
     1621 atagatataa cccactgtaa tagcttgaag aaatccatgt tgccgcaccg gtgcggcatg
     1681 gcacgcattt tgcggatcag gcggaaacgg cctcgcgaca aagcttcacg ctcaaggcgc
     1741 gtgggcggcg aacgcatgca ggagcgaaac gatggacact gtcgattatg tgaaacccgc
     1801 cgacgtggcg gtcgcgatgg ccgaaaccgg ccggcgcaag ctcgccttgg cgccgcgcga
     1861 tctgttgatc cgcggcatgc tgtccggcgc catcctcggc gtcgccacga gcctggcctt
     1921 taccggcgcg gtgcagacca atacgccgct ggtcggcgcg ctgatttttc cggtcgggct
     1981 gatcatgatc gtgctgctcg gcctcgaact cgtcaccggc agcttcgcgc tggtgccgct
     2041 gccctggctc agccgtgagg cgagcgcctc ggccgttgtc gtcaattggg gctgggtctt
     2101 catcggcaat ctgatcggca gcgtcgctta cggcgcgctg atcgcgattg cgctcaccaa
     2161 tatgggcacc gcggcgccgg ctggcgtcgc cgcccgcatc gtgcaagtcg ccgaggcgaa
     2221 gacgatcggt tactcggcga tcggtttcgc cggcatggtc accgtctttg tcaaagcgat
     2281 gctgtgcaac tggatggtct gtctcgccat cgtgctggcg atgaccacaa attcggtgat
     2341 cggcaagatc gcctgcgcct ggatgccggt ctttgtgttc ttcgcgcagg gctttgagca
     2401 ctcggtcgtc aatatgttca tcatccccac cgggatgatg atgggcgcca aggtcacggt
     2461 tgcggattgg tggctgtgga atcagatccc ggtgacgctc ggcaatctgg tcggcggttt
     2521 cacattcacg ggcttcgcca tttacgtcac ctacaagccg cgcaccgtcg tcaaggtctt
     2581 ggcgccgacg ccgactggcg tgcccgcgga atagatcaag ccgggtgcgg aaagcgtgat
     2641 gcgcagcgtt taaacggagg tcttcagacg gaacaggcaa tgccgagcga tttcgaacca
     2701 gagcagaagc gctatctcga aggcctgatg accggactgc agatcgcaaa gactctgcgt
     2761 ccggcaggcg gcaacgggac ggcgcctgtt gcctccaccg ggccgaacgg cgacgctgcc
     2821 tccgcgccgg agccgatcgg gcccgacgcg gcggctttgt gcgcgcaaga ccgcgcgatc
     2881 aaggccggcg gcaagctttc cgatccggag aaattcaagc gcgaacggca tccgttcgac
     2941 gcttacgagc ggctgaaaga acaggcgacg aaaaacgaag cgccgaaagc cgacgacaat
     3001 ttccgctggc gtttcttcgg cctgttttac tgcgcgccag cgcaaaaatc gtatatgtgc
     3061 cggctgcgca tccccaatgg cattctcaac cattggcaat ttgccggcgt cgccgatctc
     3121 gctgaacgct atgccggcgg ctacgcccat gtgacgacgc gcgccaacct gcagatgcgc
     3181 gaagtcgagc cgaagaacgc ggtcgcgatg gtggaagcga tccaggatct cg
//
LOCUS       DATILV010000509         2042 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4206168, whole genome shotgun sequence.
ACCESSION   DATILV010000509 DATILV010000000
VERSION     DATILV010000509.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2042
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4206168"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(100..1479)
                     /locus_tag="VLJ17_11520"
     CDS             complement(100..1479)
                     /locus_tag="VLJ17_11520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012631264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1182 family transposase"
                     /protein_id="HSV23645.1"
                     /translation="MMGQQQGGQKKLFYSFNLDDHIPYDHPLRGIDQFLDLGELRQHL
                     APHYSHTGRPSIDPQLLIRMLVVGYCFGIRSERRLCEEVHLNLAYRWFCRLGLEDEVP
                     DHSTFSKNRHGRFRDSDTLRFVFEQVLERCVREGLVGGEGFAVDASLVKANANRHRDV
                     PGEEADWSDRQSISRPVREYLAALEQSEVEKNTPKSISLTDPAAQLIAAWGPASYAYS
                     INYLIDTAAGIVVDVEATPAHQSDEINAAEVMIERVEDRFDLKPDRLIGDTNYGTAKI
                     LAWMVDEKQIEPHVPVWDKTQRDDGTLSSSDFQWDEQADEYRCPEGHVLRSEWRAYKD
                     ARAHITKAATIIYRSRTSDCATCPLKARCCPNTPTRKIARSVHESARNVARDIAKTDV
                     YKQSRKDRKKVEMLFAHLKAILKLDRLRLRGPNGAHDEFLLAATAQNLRRMARWLCPV
                     EPETASMAI"
     gene            complement(1697..>2042)
                     /locus_tag="VLJ17_11525"
     CDS             complement(1697..>2042)
                     /locus_tag="VLJ17_11525"
                     /inference="COORDINATES: protein motif:HMM:TIGR02246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SgcJ/EcaC family oxidoreductase"
                     /protein_id="HSV23646.1"
                     /translation="NAGDLVCLLNLMADDVVFLNPGQAPFGRDGFPAGFSAAHQQARI
                     NCVSELEDVVVVGEVAYTLSRDSLSVTPRPTGEATQFAGHRIAVYRKQPDGRWLLARD
                     AHTLSPVAKLRS"
BASE COUNT          401 a          619 c          587 g          435 t
ORIGIN      
        1 gacgcttaaa cgactggtat taccctgaac gtgcagggta aagaggatca aagcttgagg
       61 gcgccgtatt ttgctttggc gacgtcgttt ttcgctaatt cagattgcca tgcttgctgt
      121 ttctggctct accgggcaca accacctagc cattcgtcgt aagttctgcg cggttgccgc
      181 cagtaagaac tcgtcgtgcg caccattcgg cccacgtagt cgcagtcgat cgagcttcag
      241 gattgccttg agatgagcga acagcatctc gacctttttg cgatccttgc gtgattgctt
      301 gtacacatca gtcttggcaa tgtcgcgggc gacattccgt gccgattcat ggacgctgcg
      361 ggcgatcttc cgagtcggtg tattcggaca acagcgagcc ttcagcggac aagtcgcgca
      421 atcggatgtt ctggaccgat agatgatggt ggcggccttg gtgatatggg cacgcgcgtc
      481 tttgtatgcc cgccattcac tgcgcaacac gtgaccttcc ggacagcgat actcgtcggc
      541 ctgttcgtcc cactggaagt cgctgctgga taacgttcca tcgtcgcgtt gggtcttgtc
      601 ccataccggc acatgcggct cgatctgttt ctcatcaacc atccacgcca gaattttggc
      661 ggtgccgtaa ttggtatcgc cgatcaggcg gtcgggtttg agatcaaagc ggtcttcaac
      721 ccgctcaatc atcacctcgg cggcgttgat ttcgtcgctc tggtgggcgg gtgttgcctc
      781 gacgtcaact acaattcccg cggcagtatc gatcaggtag ttaatggaat aggcgtagga
      841 cgccggtccc cacgcggcaa tcagctgcgc cgccggatcg gtcagcgaaa tgctcttcgg
      901 cgtgttcttc tccacctcgg actgctccaa cgccgccaga tattcgcgca ccgggcggct
      961 gatcgattgc cgatccgacc agtcggcctc ctcgccgggt acgtcacgat gacggttggc
     1021 gttggccttc accaagctgg catcgacagc aaacccttcg ccacccacca gcccctcccg
     1081 cacgcagcgc tccaacacct gctcgaacac gaaacgcaac gtgtcgctgt cacggaagcg
     1141 gccatgacgg ttcttggaga aggtcgagtg gtccggtact tcatcttcca atcccaagcg
     1201 gcagaaccag cgatacgcca ggttcagatg gacctcctcg cagagccgcc gctcggaacg
     1261 aatgccgaag caataaccca caaccagcat gcgaatcagc agttgcggat cgatcgaggg
     1321 ccggccggtg tggctatagt gcggggccag atgttggcgc aactcgccca gatcaagaaa
     1381 ttgatcgatt ccgcggagcg ggtgatcgta gggaatgtgg tcgtcgaggt tgaatgagta
     1441 gaacagcttc ttctgtcccc cctgttgttg tcccatcatt gccgctcctc ccactcgaac
     1501 gccttgcttt caccatagct aacaagcgtt cgaattcaag ggactttttc aacaacatcg
     1561 cggcggagca gtcgttcatc gccgcgaagc gacggaccgt acccgacccg aagcaggcgg
     1621 tgacgagcgg ctgccatcgg gtagaccaac gacaccgttc acctgccgcg acggctggtt
     1681 cggcgcgtct cacctctcac gacctcagct tcgccaccgg ggacaacgtg tgggcatcgc
     1741 gggccaggag ccagcggccg tcgggttgtt tgcggtatac cgcgatacga tgaccggcga
     1801 actgcgtcgc ttccccggtg gggcgcgggg tcaccgataa tgaatcccgg ctcagcgtgt
     1861 aggcgacttc gccgacgact acgacgtctt ccagctcgct gacgcaattg atccgagcct
     1921 gttggtgggc ggcagagaac ccggcgggaa atccatcccg gccaaacggc gcttggcccg
     1981 gatttagaaa cacgacatcg tccgccatca agttgagcaa gcagacaaga tcgcctgcgt
     2041 tg
//
LOCUS       DATILV010000510         1713 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4719260, whole genome shotgun sequence.
ACCESSION   DATILV010000510 DATILV010000000
VERSION     DATILV010000510.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1713
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4719260"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(28..1392)
                     /locus_tag="VLJ17_11530"
     CDS             complement(28..1392)
                     /locus_tag="VLJ17_11530"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV23647.1"
                     /translation="MHKQFTLLAALFFILFSIGQLPAQSPAVVTLVKAERLLDPRSGN
                     VLSPAAVLIEDGKIKEVGSPAQVQGHAPTGVKVIDLGHATLLPGLIDGHTHLLLDVIV
                     PPEAEIARHSNGIFAPSQLLAIAESPTKRVLLGAQLAREDLESGFTTVRNLGHSGVDG
                     DAALRDAINAGRIPGPRILASGRKIMALGSYVQNLNPALAEAILQQEFLPIDSPDRAR
                     QAVRQNVFYNVDVIKVTVGGDISVPELTAVVEEAHRQHLKVAVHAIDTPSIQTAIDAG
                     ADSIEHGDQVTDEQLKQMHDKGIFFDLTPTFAGSFFMKMNELSIVMSPAFRARNTEAD
                     ARDQKHYADLVPRVLKSGVKFAAGSDMSWFYPGKTRGQNSVATIVNLRDAGMSPLDLI
                     RAITTNAAEMLGWQDRIGSVEPGKFADLVAVGGDPIADITELERVRFVMKDGQVVRND
                     RASH"
BASE COUNT          362 a          498 c          492 g          361 t
ORIGIN      
        1 gaaactcatc gagcagcgag ctgcgcctca atgcgacgca cggtcattcc ggaccacctg
       61 gccgtccttc atcacgaatc gaacccgctc cagttccgtg atgtcggcga tcgggtctcc
      121 accgacggcg acgaggtctg caaatttccc cggctcaacc gaacctatgc gatcttgcca
      181 gcccagcatc tccgctgcat tcgtggtgat ggcccgaatc aggtcgagag gcgacattcc
      241 ggcatcgcgc aaattaacga tggtcgcaac gctgttctgc ccgcgcgttt ttcccggata
      301 gaaccagctc atatcggaac ctgcggcaaa cttcaccccc gatttcaaaa cccgcggaac
      361 cagatcagcg tagtgttttt ggtcgcgggc atcggcttcg gtattcctag cgcggaaggc
      421 gggtgacatt actatgctga gctcattcat tttcataaaa aagctgccag caaaagttgg
      481 cgtcaggtcg aagaagatgc ctttatcgtg catctgcttg agttgctcgt cggttacttg
      541 atcgccatgc tcgatagagt ctgcgccggc gtcaatggca gtttgaatac tgggggtatc
      601 gatagcgtgc acagcgacct tgaggtgctg ccgatgtgcc tcctcgacaa ccgccgtcag
      661 ctcagggact gagatgtccc cgccgactgt taccttgatg acatcgacgt tatagaagac
      721 gttctgtcgt actgcctgcc gtgctcggtc ggggctgtct atcggcagga attcctgttg
      781 gagaatcgct tcggcaagcg cgggattcaa attctgaaca tagctaccca gcgccataat
      841 cttgcgtccg gatgccagga tcctggggcc gggaatgcgg ccggcgttga ttgcatcgcg
      901 cagagcggca tcgccgtcaa caccggagtg tccgagattg cgcaccgtag taaagccgct
      961 ctccaggtct tcgcgcgcca attgcgcccc cagcaagacg cgcttagtgg gcgactcggc
     1021 tattgccaac agttgtgagg gcgcaaatat gccattggag tggcgcgcga tctcggcttc
     1081 cggagggaca atcacatcga gaagcaagtg cgtgtggccg tcgatgagcc cgggcaaaag
     1141 cgtcgcgtga cccagatcga tgactttgac accagtcggc gcatgccctt gcacttgggc
     1201 aggcgagcca acctccttga tcttgccgtc ttcaatcagc acggccgcgg gtgaaagcac
     1261 attgccgctc cggggatcga gcagccgctc agcttttact agagtcacga cagcgggcga
     1321 ttgggcgggg agctgcccga ttgaaaacag aatgaaaaat aaggccgcca acagcgtgaa
     1381 ctgcttgtgc atacgcctcc gtcctcagta tcaacgcatt atcgagttcg gctcccaggt
     1441 cagtttttgc ttcgccgcgg ggattacttc cgagcaatga aacaacaagc ggtatgggct
     1501 accgttccaa aaatgcctcc aaggagtgcc gtgccgaacg ctaccgtcaa cagcgcgctt
     1561 gctgtgctgt acccccgttg aggctgagca gtcagccggg caaggcgatg gcttataaac
     1621 gaggaggccg tcgcctgcag caagaatgcc tcttcatgga ttggcaagtt tggctaacgc
     1681 cgaaaccagg tcgccaccgc gggcgctctg aat
//
LOCUS       DATILV010000511         3268 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3190073, whole genome shotgun sequence.
ACCESSION   DATILV010000511 DATILV010000000
VERSION     DATILV010000511.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3268)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3268)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3268
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3190073"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..437
                     /locus_tag="VLJ17_11535"
     CDS             <1..437
                     /locus_tag="VLJ17_11535"
                     /inference="COORDINATES: protein motif:HMM:NF012936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="asparagine synthase C-terminal domain-containing
                     protein"
                     /protein_id="HSV23648.1"
                     /translation="LLPDQVLPFVDRLSMAHSVEVRPPFLDHRLVEFACSLPGNMKIK
                     SGRVKSILKNAVGDLLPPALIERPKEGFIMPINEWLVDKLSGFVRSTLAPEKIKRQGL
                     FQADAIRDMLDAHFSGRSHWGNQIWNLLMLQLWWEAYIDRPA"
     gene            434..1267
                     /locus_tag="VLJ17_11540"
     CDS             434..1267
                     /locus_tag="VLJ17_11540"
                     /inference="COORDINATES: protein motif:HMM:NF012760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016742 - hydroxymethyl-, formyl- and
                     related transferase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formyltransferase family protein"
                     /protein_id="HSV23649.1"
                     /translation="MTVPKFRFVLFALTGLGNIVLKRLIESQLAPDLVVTRAERMPYP
                     YEPIPFIGDAASESGVSCLVDVEGEQEVVRRGAELLLIATYHRRVGSGVSSRCGVAIN
                     LHPSMLPRNRGASPFFWSIRNGDRDSGVTAHLLSERLDAGDIYLQQSVPIAADETQST
                     LRHKLGVLAAEVAVKVVRAHSSRSLAFHPQSEENATSYPRLDDQNRQLDLTETGAAVL
                     RHVNALRDWPLALLGERGVRQVLEIAPATAGASPATMLTMDGTVCRVRTADADLVLQL
                     D"
     gene            1339..2490
                     /locus_tag="VLJ17_11545"
     CDS             1339..2490
                     /locus_tag="VLJ17_11545"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HSV23650.1"
                     /translation="MSKRRVPFFRHDLGVPELEQLTEVLKGEILTTGEYVAKLEQKLA
                     TYLGRKHVLAVNSCTAALHLSLLGLGIGPGDEVITTPMTFIATATSILEAGARPVFVD
                     VEPDTGNLDAALIEAAITPRTKAIMPVHLYGLMCDMQSLRSVADRHGLKIVEDSAHCI
                     EAKRDGVGPGELGDTACFSFYATKNLTCGEGGALATDNTELYERLKLLHLHGMTKTAY
                     DRSREGYLHWDMVVLGWKYNMSNIEAALLLPQFERIGRKLDQRTALARRYDERLAAVA
                     EIRRPGTRHNTVHSRHVYPVRVAGEKRDSVVEALKSEQVGCVVNYRAVHLMQYFRENF
                     GYKLGDFPEAERIGDETISLPFYPGMPLDDVDIVVDALKRALTRNSVEA"
     gene            2514..>3268
                     /locus_tag="VLJ17_11550"
     CDS             2514..>3268
                     /locus_tag="VLJ17_11550"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSV23651.1"
                     /translation="MRAPDQVLTAPASVPSGSLPQEGGWPSTSLPEHVALGKFTHGVS
                     MLAWAHNEEILIESFLERAVALLDRVAIDWEIVLVDDGSTDRTNEIATTFAAREPRVR
                     LIRHQHNLNVGMACRTAIAQASKEFLFWQTVDWSYDIGKLRVFLELLMHFDAVQGIRP
                     VPIRLMSYIPVLRSIYRVRRRSDSFYKAIISLGNYYVLTILFGVRFHDFQNVTFYRTR
                     VVQALPLVARTSFINPELLLRSYYQGARFIEVP"
BASE COUNT          672 a          907 c          949 g          740 t
ORIGIN      
        1 cgctattgcc cgatcaggtg cttccgtttg tcgacagatt gtcaatggcg cattcggtcg
       61 aagttcgccc gccgtttctg gatcacaggc tggtggaatt cgcctgcagc ttgcccggca
      121 atatgaaaat aaaatcgggc cgggtgaaga gtattctcaa gaatgcagtt ggcgacttac
      181 tgcctccggc actgatcgag cgcccgaaag aggggttcat catgccaatc aatgagtggc
      241 tggtcgacaa actttcagga tttgtccgtt cgacgcttgc acctgaaaaa atcaaacgcc
      301 agggcttgtt tcaagccgat gcgatacggg acatgctgga cgcccacttc tctggacgat
      361 cgcattgggg aaaccaaatc tggaatttgc taatgttgca gctgtggtgg gaagcctata
      421 tcgaccggcc ggcatgactg ttccgaaatt caggttcgtg ctctttgcgt tgaccgggtt
      481 gggcaatatc gtcctcaagc gcttgatcga atcgcaactc gcgcccgatt tagtagtcac
      541 acgggctgag cgcatgcctt acccgtatga accgattccg ttcatcggag atgccgcctc
      601 tgagagcgga gtgtcatgtc tggtcgatgt cgagggcgaa caggaagtgg tccggcgcgg
      661 agctgagctg ctgttgattg cgacctatca taggcgcgtc ggtagcggtg tttcgagtcg
      721 atgcggagtt gcgatcaacc tgcacccatc catgctgccg cgcaatcgcg gagccagccc
      781 gtttttttgg tcaatacgca atggtgacag agacagcgga gtaactgcgc atcttttgtc
      841 ggagcggctc gatgccggcg acatctatct gcagcagagc gttccaatcg ccgcggacga
      901 gacccagagc acgttgcggc ataaacttgg cgtacttgcc gctgaagtcg ccgttaaggt
      961 tgtgcgcgca cattcaagca gaagtctcgc gtttcacccg cagtcggagg aaaatgcaac
     1021 atcgtatccg cgcctcgatg atcagaaccg gcagctcgat cttaccgaga ccggcgccgc
     1081 agtactgcgg catgtcaatg ccttacgcga ctggcccctc gccctgctag gcgagcgtgg
     1141 cgtacgtcaa gtgctggaaa tcgcgccagc cacggccgga gcgtctccgg cgaccatgct
     1201 tacgatggac ggcaccgttt gccgtgtccg cactgctgac gccgacctcg tgttgcaact
     1261 tgactaacca tccgttggct gcattgtgac actcggctat actgtgtttg gaagcaccta
     1321 ctgctgggga gtgtcgttat tagtaagcgt cgcgttcctt tttttcggca tgatctaggc
     1381 gttcccgagc ttgagcaact aaccgaagtg ctcaagggcg agattctgac cactggcgaa
     1441 tatgtcgcca aattagaaca aaaattggcg acttatctcg gccgcaagca tgtcctggca
     1501 gtgaattcgt gcaccgcggc gctacatctg tcgctgctcg ggctcggaat tggccctgga
     1561 gatgaagtca tcacgacgcc gatgactttc atcgctaccg cgacctcaat cctggaggcg
     1621 ggcgcgcgtc cggtatttgt cgacgtcgag cccgatacgg gcaacctcga cgccgcactg
     1681 atcgaagctg ctatcacgcc gcgtaccaag gcgatcatgc ccgttcatct ctacgggctg
     1741 atgtgtgaca tgcaaagcct acgctccgtc gccgatcgcc acggtctgaa gatcgtagag
     1801 gattcggcac actgcatcga agcaaagcgc gacggcgttg gtcccggcga actcggcgac
     1861 actgcgtgtt tcagcttcta cgccacgaag aacttgactt gcggtgaggg cggagcgcta
     1921 gcaacggata acactgagct ttatgagagg ctgaagctgc tccatctgca cggcatgaca
     1981 aagacagcat atgatcgctc gcgcgaggga tatctgcact gggacatggt cgtgctgggt
     2041 tggaaataca acatgagcaa tatcgaggct gcactgctat tgccgcaatt cgaacgcatc
     2101 gggcgtaagc tcgatcagcg gacagcgctc gcgcggcgct acgacgagcg gcttgctgca
     2161 gtggctgaaa tccggcggcc tggtacacgt cacaatacgg tgcattcgcg tcatgtctat
     2221 ccagtacggg tggcaggcga aaagcgtgat tccgtcgtcg aagcgctcaa aagtgaacag
     2281 gttggctgcg tcgtgaatta tcgcgccgtg catctcatgc agtattttcg tgagaatttc
     2341 ggatataaac ttggcgattt tccagaggct gagcgtatcg gcgatgagac gatctcgcta
     2401 ccattctatc ccgggatgcc gctcgacgat gtcgatattg tcgtagacgc gcttaaacgg
     2461 gctttgacta ggaactccgt ggaagcctga cgcgctggcg aggattgcgt gatatgcgtg
     2521 ctccagatca agtgttgact gcccccgctt cggtgccgag tggctccctg ccgcaggagg
     2581 gcggctggcc gagcacatcg cttcccgaac acgttgcgct gggcaagttc acgcacggcg
     2641 tgtcaatgct agcctgggcg cacaacgagg aaatcctcat cgagtcgttt ctcgaacgcg
     2701 ccgtcgcgtt gctcgatcgg gtcgcgatcg attgggagat cgtattggtc gatgatgggt
     2761 cgacggatcg cacgaacgag atcgccacca ctttcgccgc gcgcgagccg cgagttcgcc
     2821 tgataaggca ccagcacaac ctcaacgtcg gcatggcgtg ccgaaccgcc attgcgcaag
     2881 caagtaagga gttcctgttc tggcagaccg tcgactggtc ctacgacatc ggcaagctga
     2941 gggtttttct tgaactgctc atgcactttg acgccgtgca gggaattcga cccgttccta
     3001 ttcgcctgat gagctacatc ccggtcctgc gatcgatcta ccgcgtccgg cggcggtcag
     3061 acagctttta taaggcgatc atctcactcg ggaattacta cgtgctgacg attctattcg
     3121 gcgttcgctt tcacgacttt cagaatgtga ctttttatcg gactcgcgta gtccaggccc
     3181 tcccccttgt cgcgcgaacg tctttcatca atcctgagct tttgttgcgc agttattacc
     3241 aaggggcgag attcatcgag gttccgat
//
LOCUS       DATILV010000512         1920 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1911487, whole genome shotgun sequence.
ACCESSION   DATILV010000512 DATILV010000000
VERSION     DATILV010000512.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1920)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1920)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1920
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1911487"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(365..1435)
                     /locus_tag="VLJ17_11555"
     CDS             complement(365..1435)
                     /locus_tag="VLJ17_11555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014198268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HSV23652.1"
                     /translation="MAQQVCVVLSSAEREQLAAIVADRNRPRKHVERAAIVLASADRH
                     SAQQVAQRIGVSRPTVWRWQQRFAESGIEGLLRDKTRKPGKAPIAAEITARVVALTCT
                     APLHQATHWTGRAMAKAIGISVGSVQRVWRAHKLQPHRLRTFKRSRDPSFAAKLTDIV
                     GLYLDPPAHAVVLSIDEKSQIQALDRTQPGLPIKPGRCQTMTHDYKRHGTTTLFAALS
                     VLDGTVIGRCMQRHRDSEFIRFLNTVERRVPAGKVIHTVLDNYATHKHPKVLAWLARH
                     PRWTFHFTPTSASWLNAVENFFSKMTRQRIRRGVFHSIADLQAAINAYLAEHNDSPKP
                     FVWTQSAEAIMAKLDRLPVTSV"
     gene            1559..>1920
                     /locus_tag="VLJ17_11560"
     CDS             1559..>1920
                     /locus_tag="VLJ17_11560"
                     /inference="COORDINATES: protein motif:HMM:NF018180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxide hydrolase N-terminal domain-containing
                     protein"
                     /protein_id="HSV23653.1"
                     /translation="MAQPQPFTLRVPDAAIADLRERLARTRFPDQAPGEPWAYGTDVG
                     YLRQLAEYWRTTFDWRAEEARLNAFPQCKVPQSGIDLHFLQVPGKGPAPCPLLLLHGW
                     PGSVFEFLELIPRLTDPAR"
BASE COUNT          351 a          585 c          605 g          379 t
ORIGIN      
        1 cgatgagggt attcttatct acctaacccc tattccaccc caaattaaaa agaggcttga
       61 catttacgag attgtcgggc aaggacgtta tcttagccat ttcggcggat ttcagagtta
      121 ctacatatac cgaataggta attgaattgc tgatttgctc tggaagtctt caggcaacgc
      181 atttctgctc agcttcagcc ccggaacgga aacgcggaac gaggctgacg ccgcgaacgg
      241 cgtcgcggcc gacaatgccg cctgcgccta tcaatcgtgt cgtcccggag cccgtgaccg
      301 atcaaaaatg tcacgaacgg cagcggctcg cttacgctca gtgcaacgcc cctcgtgcag
      361 tgaatcaaac agaggttacg ggaaggcgat cgagtttggc cataatggcc tcggcagatt
      421 gggtccagac gaacggtttg gggctgtcat tgtgttcagc gagataagca ttgatggcgg
      481 cctgcaggtc ggcgatcgag tggaagacgc cgcggcggat gcgctgccgg gtcatcttgg
      541 aaaagaagtt ctcgacggcg ttgagccagg aggccgaggt cggcgtgaaa tggaaggtcc
      601 aacgcggatg acgcgccagc caggccagca ctttgggatg tttgtgcgtg gcgtagttat
      661 caagcaccgt gtggatcacc ttgccggcgg ggacgcggcg ctcgacggta ttgagaaagc
      721 ggatgaattc gctgtcgcgg tggcgctgca tgcagcggcc aattacggtg ccgtcgagca
      781 cgctgagggc ggcgaacagc gtggtggtgc cgtgccgctt gtaatcgtgc gtcatggttt
      841 ggcagcgccc gggcttgatc ggaagtcccg gctgggtgcg gtcgagggct tggatctggc
      901 tcttttcgtc aatcgacagc accactgcat gggccggcgg atcgagatag agcccgacga
      961 tgtccgtgag cttggcggca aagctgggat cgcgggagcg cttgaaggtg cgcagccggt
     1021 gcggctgcag tttgtgcgcg cgccagacgc gttgcaccga acccaccgag atgccgatgg
     1081 ctttggccat tgcccggccg gtccagtggg tcgcctggtg cagcggcgcg gtgcaagtca
     1141 atgccaccac ccgcgccgtg atttccgccg cgatcggcgc cttgccgggt ttgcgggtct
     1201 tgtcgcgcaa caaaccctcg atcccgctct cggcgaagcg ttgttgccac cgccacaccg
     1261 tcggccgact gacgccaatg cgttgcgcca cctgctgcgc cgagtgccga tccgccgagg
     1321 cgagcacgat tgccgcccgc tccacatgtt tgcgcggccg gttgcggtcg gccacgatcg
     1381 ctgccaactg ctcgcgctcc gcactgctca aaaccacgca tacttgttgt gccatggccc
     1441 ccatccccca agccatgacc cagtatcgca tatcccgatg cgtttgtgaa tcctctgaat
     1501 gactctaaac actagggtgc tatgctgacc ggccccgaat agccgagcga ggatgcctat
     1561 ggcccagccg caaccattca ccctcagagt ccccgacgcc gccatcgccg acttgcgcga
     1621 acggctcgcg cgcacccggt ttcccgacca ggctccgggc gaaccatggg cctacggcac
     1681 cgatgtcgga tatctccgcc agctcgccga gtactggcgc accactttcg actggcgggc
     1741 cgaagaggcg cggctcaatg cctttccgca atgcaaggtg ccgcagtccg gcattgatct
     1801 gcattttctg caggtgcccg ggaaggggcc agctccttgc ccgctactcc tgttgcacgg
     1861 gtggcctgga tcggtcttcg agtttctgga gctgatccca cggctgacgg acccggcgcg
//
LOCUS       DATILV010000513         2255 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_629475, whole genome shotgun sequence.
ACCESSION   DATILV010000513 DATILV010000000
VERSION     DATILV010000513.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2255)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2255)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2255
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_629475"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(390..1067)
                     /locus_tag="VLJ17_11565"
     CDS             complement(390..1067)
                     /locus_tag="VLJ17_11565"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HSV23654.1"
                     /translation="MSAERGEVTGLLRIDAARVNFEMALTRILAKLAQQHPRLTVEVR
                     TTQTSVDIVAQGFDAGIRMLRSIQQDMVTTRLTGSFKIILGASRGYLDARGTPKSIAD
                     LHQHNCIHSLVRETRGIRSIASGVVFDWELIDGKKPTTVKTSGTALVTDTTEALRLAL
                     AGVGIAYVVEPLARRYVREGSLEWLLPQTAVEHDGLFLYYPRRASLAPKLRAFIDVAK
                     KTLKSLE"
     gene            complement(1140..1319)
                     /locus_tag="VLJ17_11570"
                     /pseudo
     CDS             complement(1140..1319)
                     /locus_tag="VLJ17_11570"
                     /inference="COORDINATES: protein motif:HMM:NF012354.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
     gene            1713..1886
                     /locus_tag="VLJ17_11575"
     CDS             1713..1886
                     /locus_tag="VLJ17_11575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23655.1"
                     /translation="MSENPLEAIERLEKLAAWHRINAEHAGADWVWEARLRAAEDLER
                     RAAKIRGQLSSGS"
     gene            1916..>2255
                     /locus_tag="VLJ17_11580"
     CDS             1916..>2255
                     /locus_tag="VLJ17_11580"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSV23656.1"
                     /translation="MPTDPQTITVFLDASPSGERRARHAVALAQRWGSHIVGLHVVFA
                     GVSLPLSTDFAVGEKAIHSVIAYAQRLDSDAEASAALVGEHFRSLCVRFNVDGEFRPI
                     GRRKTVAEAIL"
BASE COUNT          485 a          648 c          645 g          477 t
ORIGIN      
        1 cctccagcgg tgagtctggt gcgaacctga ttttcggggc cgaatcccat cgatgaccgt
       61 cgaggatttc gccgacgccc gaggcgtatg aggtgctgcc ccgcaatacc gcggacaaga
      121 cgacgttgcg gccatttctc gagcacaccg aacgacgata cggcaaggcg cgccgcgtcg
      181 gtgtttgttg aagcgatcgc gcatgaagaa gtgagcacca ccggctgggg ccgcgaaccg
      241 tgacgcgggt ccatcgcttg ataccagcaa tgtcttggca tggttctgaa acggtttgaa
      301 ttgatctccg ttgtattcac tgttgaggcg catttagcac tacctcctcg ggcttggtgc
      361 accctcactc cgtgcaaggc agatattgct cattcgagcg attttagagt tttctttgcc
      421 acgtcaataa aggcgcgaag cttcggcgct aaggaagcac gccgtggata gtagagaaac
      481 aatccatcat gttcgacggc tgtttggggc agcagccatt caaggctgcc ttcgcggacg
      541 taccggcgtg ccagcggctc aacgacataa gcaatcccga cacctgccaa agccaatctg
      601 agcgcctccg tcgtatctgt caccaaagcc gtacccgacg ttttcacggt tgtcggtttc
      661 ttcccatcga tcagttccca gtcgaaaacc acaccggacg cgatactgcg tattccacgt
      721 gtctcacgca cgagtgagtg aatacagttg tgttgatgta aatcggcgat cgacttcggc
      781 gtgcctctgg catcgagata gcccctcgag gcgccgagaa tgatcttgaa tgacccagtc
      841 aaccgcgtcg tgaccatatc ttgctggatg gacctgagca ttctgatgcc ggcatcgaag
      901 ccttgagcaa cgatgtccac ggacgtctgc gtggtcctga cctcgacggt tagtcgcggg
      961 tgctgctggg caagcttcgc aagaattcgt gtcagtgcca tctcgaagtt gacgcgtgcc
     1021 gcatcaattc gcaacagccc ggtcacttcg ccgcgttccg cgctcaatcc ttcgactgtc
     1081 ttctcaatat ctgtcagtgc gggttcgacg ccggcgacaa atcgcgcccc cgcctctgtc
     1141 aaagaaacgc tccgcgtagt gcgtgcaaac aacgggattg cgagtcggtc ctctacgctg
     1201 cgcacggcgt gactgatcgc cgaaggactc atgccgagct cagccgcagc ggccgcgaag
     1261 gaccggtggc gagcaacaca agcaatgatc ggcaaatggc cgagaaggtc gcggtccatt
     1321 catgcattgt atcgcatacc gcatgccatt tgaactgcct tatcgaaccc tgtatccgca
     1381 ctcatttttg cttatgtcgc gattgctcat cctctgagag gagcggcggc aacgatgtga
     1441 accggaacga ccgcgcctat gataaggcct atgataggga ggactgtctt ggaacgaatc
     1501 acgagaaaca actccgcaat atgtctgatt gaccatcagg tcggcctatt ggttggagtg
     1561 cacgatatca cagtcgccga gttgaaaaca caatgtcagg ccgacgcgaa cagagacacg
     1621 gagggcaggc atgtccaccg aatggctgat atcgcgaccg tctgacgaag cgtaactcca
     1681 aaccaaattg tactgttccg gagatcacac tgatgtccga aaacccgttg gaagcaatcg
     1741 aaagattgga aaagcttgcc gcctggcatc ggatcaacgc cgagcacgcc ggagccgact
     1801 gggtgtggga agcgagattg cgggccgccg aggatctcga gcggcgagcg gctaaaatcc
     1861 gcgggcaact ttcttcgggt agctgagcag ttcagggcgc gcagaggact ttgcaatgcc
     1921 tacagatccg cagacgatca cggtctttct tgacgccagc ccgtccggag aaaggcgggc
     1981 ccgccacgct gtcgcccttg cccagcgctg gggctcccat atcgtcggtc tacatgttgt
     2041 tttcgcgggc gtgagtttac ccctgtcaac ggatttcgcc gtgggggaga aggcaatcca
     2101 ttctgtgatc gcctatgccc aacggctcga ttccgatgcc gaagcctctg cggcattggt
     2161 aggtgagcac tttcggtccc tttgcgtccg gttcaacgtc gacggagaat ttcgtccgat
     2221 cggccggcga aaaaccgtgg cggaggctat cctca
//
LOCUS       DATILV010000514         3769 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3956506, whole genome shotgun sequence.
ACCESSION   DATILV010000514 DATILV010000000
VERSION     DATILV010000514.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3769
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3956506"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            351..1361
                     /locus_tag="VLJ17_11585"
     CDS             351..1361
                     /locus_tag="VLJ17_11585"
                     /inference="COORDINATES: protein motif:HMM:NF013568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23657.1"
                     /translation="MTNLIGTIERWSALPANIIRRSPVVPITDNYDRLFYEPDAIARS
                     ARYSHYVDETHMLRTHTTAGIPAALAETDSDRLIVCPGLVYRRDVVDRLHVGEPHQTD
                     FWIVRQARLRRADLLEMIAVVVGTMLPGHAYRCNETIHPYTMNGLEVEVQLDERWVEV
                     LECGEIHPWLLNESNLPSRQWSGLAMGIGLDRLVMLIKQIDDIRLLRSSDPRIARQML
                     NLEPYQPVSNQPATHRDMSICVADVDMELLGDRVRDVLGERCGWVENIELIQDSNYAS
                     VPEKARERLGMSADQHNLLIRITLRSLDGSISKAEANRVYDHVYAELHEGTAGYFRAI
                     TL"
     gene            complement(1351..1956)
                     /locus_tag="VLJ17_11590"
     CDS             complement(1351..1956)
                     /locus_tag="VLJ17_11590"
                     /inference="COORDINATES: protein motif:HMM:NF013412.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HSV23658.1"
                     /translation="MVQDIMYHDGNRQLQDRFGSRPISDRLEEKLTRTQFTSDDKIFV
                     ESVPYFFLATADATGRPDCSFKGGMPGFVRVIGPSELAFPDYDGNGMFKSLGNILVNP
                     SIGMLFIAMHGKPQRLRVNGEATVSDQDPLLGQTVGAQLIVRVAARAIFPNCPRYIPS
                     MQLIEPSIYVPRSGHEAPDPAWKNFPDFKDCIHPRQPTFKG"
     gene            complement(1966..2919)
                     /locus_tag="VLJ17_11595"
     CDS             complement(1966..2919)
                     /locus_tag="VLJ17_11595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018647947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23659.1"
                     /translation="MFYLLLLLSFIAMATGVFVVGLGIPIRETFFGAALLIAGSVALT
                     GGLILVGLAAAVRELRRMVHGLKARSPGPRPVRHAERRDGERIADSDRRPEPRLPMPG
                     ALGAEALNVIPTKLDAPDTRGWSKPGPEWLRRAVAEVEAAQPPAEAPPQPAEAAPQPA
                     EAAEAAATADDYRAEENRRLSEAWLHTAAAQPPDHAATEVRQTPAVPSPNLFDTMWPS
                     KHRTNVEVSEQQAEAAPEIELRPAEAKSPPLAPAPPQVAPPVRPVRVEPRPLPVLKSG
                     VIDKMAYTLFTDGSIEAKTPEGTVRFGSIEELRKYIDSSED"
     gene            3519..>3769
                     /locus_tag="VLJ17_11600"
     CDS             3519..>3769
                     /locus_tag="VLJ17_11600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HSV23660.1"
                     /translation="MSFSLPDLPYSHDALAPYMSRETLEYHHDKHHLAYVNNGNNLLK
                     GTEWEGKSLDDIVKGSFGKNAGLFNNAGQHYNHMHFWKW"
BASE COUNT          748 a         1148 c         1118 g          755 t
ORIGIN      
        1 cgtcaaaatc atgagcacca caatgataaa tatccgttcc gtcctggggc ggttgaaagt
       61 gcgcccgtac agcagcgggg ctttgcgcgc gttctgcttt accagctttg catcgtttag
      121 ccgctggagg ccgccgcgaa gttaggcgtt atatcgaatc gcggtctgag cctctaggat
      181 cttccgggag gctttttctt tgcccggatg attcttccgc ggtccacccc gaaagatgaa
      241 agggcaacga cgatggaatt tcgcgactaa gtccagaacg tcggcatcga tatctggcgc
      301 tgcgtgattt gaccgacccg catcagggtc gacacgctat caatctcctg atgaccaacc
      361 tgattgggac catcgaacgg tggtcggcgt tgccggccaa catcatccgg agatcaccgg
      421 tcgtcccaat caccgacaac tacgatcggc tgttctacga acctgacgcc atcgcgcgct
      481 cggcacgtta ctcgcactac gtcgatgaga cgcacatgct gcggactcac acaacggcgg
      541 gcatcccggc agcgttggcg gaaaccgaca gcgatcggct gatcgtctgc cccggactgg
      601 tctatcgccg cgatgtcgtg gatcgcctgc atgtgggcga accgcaccag accgacttct
      661 ggatcgtgcg gcaagctcgg cttcgccgcg ccgatcttct ggagatgatc gcggttgtgg
      721 ttgggaccat gctgcccggc catgcgtatc gctgcaacga gaccatccat ccttacacga
      781 tgaacggact ggaggtggaa gtgcaactcg acgagcggtg ggtcgaggtt ctcgaatgcg
      841 gggagatcca tccgtggctg ctgaacgaaa gcaatttgcc aagtcggcag tggtcggggt
      901 tggccatggg tattggtctt gatcgcttgg ttatgctgat caagcagatc gacgacatcc
      961 gcctgctgcg tagcagcgat ccccgcatcg cccggcagat gttaaacttg gagccctatc
     1021 agccggtcag caaccagccg gcgacccacc gcgacatgtc gatctgcgtc gctgatgtgg
     1081 acatggagtt gctgggcgac cgcgtcaggg acgtgctcgg tgagcgctgc gggtgggtag
     1141 agaacataga gttaatccag gactccaact atgcgtcggt tcccgaaaag gcacgcgaac
     1201 ggctcggcat gtctgccgac cagcataacc tcctgatccg gattacgctg cgctcgctgg
     1261 atggcagcat ctcaaaagcg gaggcaaacc gcgtctacga ccacgtctac gcagagttac
     1321 acgaggggac ggcgggctat ttccgcgcca tcaccctttg aacgtcggtt ggcgcgggtg
     1381 gatgcagtcc ttgaaatccg ggaaattctt ccatgcggga tcaggcgctt catggccgga
     1441 tcgcggcacg tagatcgacg gttcgatcaa ctgcatgctc ggtatgtaac gcggacagtt
     1501 tggaaagatg gcccgtgcag cgacacgcac aatgagttgc gcgcccactg tctgacccag
     1561 cagcggatcc tggtcgctca ccgttgcctc gccgttgacg cgaagccgct gcggcttgcc
     1621 gtgcatggcg atgaacaaca ttccgatgct ggggttgacc agaatattgc ccagactctt
     1681 gaacataccg ttcccatcgt aatccgggaa agcaagctcc gatggtccga tgacgcgcac
     1741 gaagcccggc atgccacctt tgaaagagca atccggccgt ccggtggcat ccgcggttgc
     1801 aaggaagaaa tacggtacgc tctcgacgaa gatcttgtcg tcggatgtaa attgtgtgcg
     1861 cgtgagcttc tcttccagcc gatcggaaat cgggcgactg ccgaaccgat cctgcagttg
     1921 gcgattcccg tcgtgataca tgatgtcttg aaccatgaag cgccatcaat cttcgctact
     1981 gtcgatatac ttgcgtaact cctcgatcga cccgaaccgc acggtgcctt caggcgtttt
     2041 cgcttcgatc gaaccgtcgg tgaacagcgt ataggccatt ttgtcgatga ctccggactt
     2101 gaggaccggc aatggccgtg gttcgacacg cacgggccga accggcggcg cgacctgtgg
     2161 cggagcaggg gcaagggggg gcgattttgc ttccgccggg cgcagctcga tctcgggtgc
     2221 cgcttcagcc tgttgttccg acacctccac gttggtgcga tgtttcgacg gccacatcgt
     2281 gtcgaacaaa ttcggcgacg ggacagccgg tgtctgacgc acttccgtcg cggcatgatc
     2341 aggtggctgc gcggcagcgg tgtgtagcca agcttccgat agccgtcgat tctcttcggc
     2401 gcggtaatca tcggctgtcg ccgcggcctc agcggcctca gccggttgcg gggcggcctc
     2461 ggccggttgc gggggagcct cggctggtgg ctgggcggct tcgacctccg ccacggcgcg
     2521 ccgcagccat tccggtccag gcttgctcca tcctcgcgta tcaggcgcat caagcttagt
     2581 tggaatcacg ttcaaagctt cggcgccgag cgctccgggc atgggcaatc gcggctccgg
     2641 ccgtctgtcg gaatccgcga tgcgttcccc gtcccggcgc tctgcgtgcc gaaccggacg
     2701 cggccccggc gaccgcgcct tgagtccgtg caccatccgc cgcagttcgc gcaccgccgc
     2761 cgcaagtcct accaaaataa gaccgcccgt gagcgcgaca ctccccgcta tgagcagtgc
     2821 cgcaccgaag aaagtctcac ggatcggaat ccctaatccg acgacgaaca cgccggtcgc
     2881 catggcgatg aaactcagca gcagcaggag gtagaacatg gcttagatgt ccgcacgcgg
     2941 ttaggaccga tcgcctcgcg ctgagcccgg aaatgcactc ctgcgcaaca accgggccat
     3001 tcagccagaa cgcatgaaga atcaaattgc tccgcccgta atataggcca gacataaggg
     3061 gccggccata agtcttgtta ttttcacggc tatctacaag ccgtcctgtg acaaaacaat
     3121 gtctcagggt gaagcgttcc ccggagcgta gagtttcggg ctgcgcgccg gcatggttgc
     3181 cgcctcgtgc gacacgccct aataagggcc ggttccgatg tggaatcgcc cctcgtcatg
     3241 cccgctcttg tcgcagacat ccacacctct cttggtgagc ttcaacaatc tcttggtgag
     3301 ctttaacaag cagggcgcgg atggctggaa caagccccac tggcgctagg ttaacgctcc
     3361 atggtgccgc gcggactccc tccccccttg tgggggtggg ggggggtggg gggtcgtgcc
     3421 gtgtgggcac cgtggtgcca catctcacga cccccacctc caaacccctc cccacaaggg
     3481 gaggaaagta atcgagaccc agcttgagga gaactccgat gtctttttct ctgcccgatc
     3541 tgccctactc ccatgatgcg cttgccccct acatgtcgcg cgagacgctt gaatatcacc
     3601 acgacaaaca tcacctcgct tacgtcaaca acggcaacaa tctgctcaag ggcaccgagt
     3661 gggagggcaa atcgctcgac gacatcgtca agggctcctt tggcaagaac gctgggctct
     3721 tcaacaatgc cggtcaacat tacaatcaca tgcatttctg gaaatggat
//
LOCUS       DATILV010000515        10031 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3190562, whole genome shotgun sequence.
ACCESSION   DATILV010000515 DATILV010000000
VERSION     DATILV010000515.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10031
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3190562"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..481)
                     /locus_tag="VLJ17_11605"
     CDS             complement(<1..481)
                     /locus_tag="VLJ17_11605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23661.1"
                     /translation="MIACTLGPLAACKARELVKVKMGNAIEWAIVGAPAPGLFPLIFL
                     TGENAPFVVNVQQYPGDFERHPVAKYGTNYRFAHDPSGPCQIGDDRLTAGSLVLTEDG
                     EWHLIVNGPRDVSWLHLESGKIMGERGSRRIAFGNWNLCIEGLKYERSETPLLSYPRA
                     "
     gene            854..1072
                     /locus_tag="VLJ17_11610"
     CDS             854..1072
                     /locus_tag="VLJ17_11610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23662.1"
                     /translation="MRGIEATPGNTMTLARFMAERAVKAQWQAQGIETAYVEPSELAS
                     AARAYLNTHPELVEQAFARLRVEKRPTN"
     gene            complement(1301..1540)
                     /locus_tag="VLJ17_11615"
     CDS             complement(1301..1540)
                     /locus_tag="VLJ17_11615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23663.1"
                     /translation="MSTDHLVLMRPTDHRTGDDFDVFHNEKLVGRIMLMDLAEGHAWI
                     CSIFVEHRKPGRPYKGYAVDRESAMKEFAEAWRGD"
     gene            3974..4213
                     /locus_tag="VLJ17_11620"
     CDS             3974..4213
                     /locus_tag="VLJ17_11620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23664.1"
                     /translation="MVTDSIEVDVYPAGGNELVIVGGRHGADTASVMSQIDCCTRTYC
                     SDHVIEQRRSTSAAKNALRAMCSTQARASRLVGIL"
     gene            4516..4803
                     /locus_tag="VLJ17_11625"
     CDS             4516..4803
                     /locus_tag="VLJ17_11625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23665.1"
                     /translation="MTGVGMTSCAEFAQKYREDPNFAHTLYFVWAQGFMSGLNLMQLA
                     LKGPMHDLNGWPFSQQQLHIRTFCDQRPLSTVAQAVRSVFNALPEIQPKSR"
     gene            4824..5093
                     /locus_tag="VLJ17_11630"
     CDS             4824..5093
                     /locus_tag="VLJ17_11630"
                     /inference="COORDINATES: protein motif:HMM:NF015325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HSV23666.1"
                     /translation="MTNILDWVSRPYGKNLWAGKPAGMVGASVRAVGTVVAQTHLRSV
                     LGYFDVPTLGQPEVLRIASVPRVYTKSNFLRPATRANASTLPCFR"
     gene            complement(5076..6638)
                     /locus_tag="VLJ17_11635"
     CDS             complement(5076..6638)
                     /locus_tag="VLJ17_11635"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HSV23667.1"
                     /translation="MIVDHLHDALVGNCLAFHRGQTEFAEQFFSLVDALERSPISNYP
                     DEMLRLYLVKASALLESNEPERTLETVRHVAERPYLIEGNLSHRLAVLALQQRALMMM
                     GRHSEAAASAWRGLSVCVHASPLQAGLAFRTFAGALHLTPADSIPSNVVPRLLAYLAR
                     TRTELQREAGSRMGRRLRRLKQIGVDKVGAVVTFIMSLAPHRLNGLQAAPEPPHASEA
                     TVLVTRAMGGMGDIITMTPGLRALAQRTGQPVHFAIKKSFFPLFADNTDVQLHDIDGA
                     PLDPQRYRAWRDLSFCPAASYESRHRPRIKKGRIELFARGMGIADKQLKASGLRPRLE
                     LTTESKNAADAFFAEHDLNGRWPIIAVHAFSRETYRDYPRMGALIERLAERYKVIVFH
                     HVAFPLPPHENIVPAFGQPLGDALATFAKCSLAVCVDSTFLHAAGALDMATVALFGPT
                     DGVIRTKHHGKTHVVSLGRAFKCMPCWRNEDIPCQLTGGRESACMAAINENEIVALVD
                     RLLEQAVSTEAR"
     gene            complement(6829..8082)
                     /locus_tag="VLJ17_11640"
     CDS             complement(6829..8082)
                     /locus_tag="VLJ17_11640"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSV23668.1"
                     /translation="MLPRPPRLTLPWRGHLATLKTVALRSLVPPARTPLVSLDNIAVA
                     GLLKSPTGLGQSARLCGDALRDAGYAVGIIDLCDQLKVAGGVPVDIADHPVRLGPGIL
                     IVHINGPQVSRALWHIGRDLVRDKLIVGYWAWELENVPADWIDGARYVHEVWTPSRFA
                     AEALSRAIDRPVRIVPHVLSVPCEPDIDKRAQFAAREALGIRSSDFVAAFAFAMLSNF
                     ERKNPLAAIAAFKHAFGRDPSACLILRCLDLDAYPAGLALIRSQIAGFNNIRLYTNIG
                     TSIGSVMQAADVYLSLHRSEGFGLTLLEAMAAGRPVIATNWSGNIDFMTPEDSLLIGY
                     RLIPVHDPQGTYQLADSHWAEPDIESAAGVLRRLRDDRISRLTMATKARAKAQHFISH
                     NRVAWQTAITANWPKSAPKTAYCSN"
     gene            complement(8475..9599)
                     /locus_tag="VLJ17_11645"
     CDS             complement(8475..9599)
                     /locus_tag="VLJ17_11645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23669.1"
                     /translation="MGHGISSFADRIKAVATAKPPAPEEVSISQDEVPISSDLEKRFR
                     ELTALVDNKGNPNINELWRIAKDIDLIKLNIKFFGYEIARQLAAALPPRQGLAPTHVG
                     LKSKASTQSDLESDWAAYWASELKVPVVFHRKLWEFAYVLQALWEHGCMESGKRGLGF
                     GCGIEPIPSYLASHDVAVTVTDLPPDDSAKTGWHDSNQYTATLEHAYKAELVDRDRFM
                     KYVSLNYVDMNAIPATLRDYDFCWSICALEHIGSIKRGLAFIENSLNTLRVGGLAIHT
                     TEYNYANDNATIDNWGTVLFQREHFNQLAERLRGSGHHVAPLDFSVGDKILDRFIDLP
                     PYSHDMTPFQHTDWGGNNNHIKAACDGFAVTCFGLIIKKA"
BASE COUNT         2102 a         2908 c         2949 g         2072 t
ORIGIN      
        1 cggctcgggg atagctcaga agcggagtct ccgaacgttc atacttcagc ccttcaatac
       61 acaaattcca atttccaaac gcgattctac gcgatccacg ttctcccatt attttgccgc
      121 tctccaaatg aagccaacta acatctcttg ggccattgac gataagatgc cactcgccat
      181 cttcagtgag cacaagagag cccgcggtta gcctatcatc tcctatttga cacggccccg
      241 acgggtcatg ggcgaatcga taattcgttc catatttcgc gacaggatgt ctctcgaaat
      301 cacctgggta ctgctgcaca ttgacaacaa agggagcatt ctcccccgtc aagaaaataa
      361 ggggaaagag acccggtgcc ggcgcgccca ctatcgccca ttcgatcgcg tttcccattt
      421 ttaccttgac tagctcacgc gctttgcatg cggccagagg gccgagtgtg caagcaatca
      481 taccgtgtct cccacttggt caagcagcgc gcccggtcaa tcgcgtgcga aacgcactcc
      541 ggcgccgcac gcattataca gacaatcgat tttcctccac aaagtttgcg gaccacaact
      601 tgcgcccaca gcgaggatat gggtttttag aaaaaactta tcgagatttg ctgaggacac
      661 ctgcgcggcg caagcaagcc agttttgccc cacccccgcg ccagccgacg ccgatgcaag
      721 aagtgccaat gcaatgggcg ttgctgatca ctttcgcttt cgtgttaagg caggatgcaa
      781 gcgagcctgc agagcgattg gtactcgcct cgcagactct aacccacaac atggaggcgt
      841 atggaggcgg agtatgcggg gcatcgaagc gacaccgggc aacacaatga cgctggcgcg
      901 gttcatggcc gagcgggcgg tgaaagcgca atggcaagcg caggggatcg agactgccta
      961 cgttgagccc agcgaacttg ctagcgccgc cagggcatat ctcaacaccc atcccgagct
     1021 tgttgagcaa gccttcgccc gactgcgtgt ggaaaaaagg cccacgaatt gaccgctagc
     1081 aaagtcctgt ttatgggggc ttctgtgacg agtaatcgac gcggaataac gggaccaatt
     1141 gccccgcagt gagcgcggcc gccgtgcttg cgcaaacgct cggcacggag gcgtgcgccg
     1201 ccgcgaaacc aaaccaggag tggagcgcgc aagcgccctg ctgcccgccc cgttgcttcg
     1261 ctcacgctcg agtgcggcaa cccacccccg atggggcggg ctagtcgcct cgccacgctt
     1321 ccgcaaactc tttcatcgcg ctctcgcgat cgactgcgta gcccttgtat gggcgccccg
     1381 gcttgcgatg ctcgacgaag attgagcaaa tccatgcatg gccctccgca aggtccatca
     1441 gcatgatacg gccgaccagc ttctcattgt ggaatacgtc gaagtcgtcg ccggtcctgt
     1501 ggtcggtcgg acgcatcaga acgagatgat cggtgctcat gtatgcaggg gtcgcgcggt
     1561 agcggacggc acagcctccc agtgccgacc gtccgcctga tggctcggag gtgggatcag
     1621 ggggctgact gactccaggc caccacagag tcaacaccag accgccgtaa acagttcata
     1681 cgactttcgt ctgatctatg gccaagaagg attaccgccg gaacatattc cttcgcgcga
     1741 ccgacgcagc atccgtgatc aagaaggcaa ttgaactgta agaaatcggc gatccgcaga
     1801 aacaggtgat cgctcaacgt gcttgatcgc tcgcgcgctt cagaatgcga tcggtgctca
     1861 tgctgggggc ggacggccct ttgcgcacga ccgtccgccc gatggctcag agtcgggctc
     1921 cagagtggga tgtgcttgcc cctgagccat ccatcgcaac ccacgctatc acaccacttg
     1981 agcattatta tggaagccga caaatttaat tggctcagcg cgccaaactc ttttgtcgtg
     2041 aatgcgactc tgatgattgt cttgtgcgat caagaaggcg attgaggtat tacccgcagg
     2101 agcggaaacg tttgatagct gaacgccaat aaaaagagcg caatgtgatg gctgcacagt
     2161 agcggacggc ctgctgcgac actcgaccgt ccgcccgatg gcgccggggt cggcgagcag
     2221 ctcttctccg agccatcggg aacagcgtta tcatatcact tgagtgcaat tatgatgaag
     2281 caagctcctg gcacattacg atgtcgtaaa ttcgactgag cgaacaacac cgcacagctg
     2341 cgtgtcagtt gtttgcccta ttggttgagg ctgcaggaca ctttctttcc tcgtcctgtg
     2401 gggcggaccc aatattggga ggcgccaatg aacagacctg ccattgtcgt gatagcgatc
     2461 gcgctgtttg gggcgatgtc ctccgacgcc aacgcccgtg ctgcgggacg cgccaagccg
     2521 ttagcgaaaa cgaccgattt ttccagcgtg ggattccagc gaacaggcgc tggtaggcga
     2581 acaggcgctg atatacgtcg gccaatgaac ggacaacgcg cgaacagaga gcgctgaaaa
     2641 cagaatcggc cgagtcagcg aaggggacag gtaagcggac agcgcgcgct gcacgcgccg
     2701 tcagcccgcc gcgtcgagga acatcggcga gttgtcgttg tcgtggtgca ggtcgcgctt
     2761 cgatagatac ggcgcagtaa attcgccgta ggttgctgtt cccgcgcgtt ggatggaact
     2821 acggcgatat tgcccgcgca agacccggcc cacgcctcaa gtcggccctc acatggacac
     2881 gtcggtatgc acttctacga cgatgatcta atgcactctc tgatgagggc gggcggtcct
     2941 cacccggatg ggaatgatac tcgtcaccgt caagctcgcc gcggcgatga tctttttgac
     3001 gcgaggttcc gatggataac cgcttcgaac tgtcggatgt cgccttgctc tatgccggcg
     3061 cctttgtggt ggtagcgctg ctcatcggcg gcgccggcta taccgtgatc aaactgctga
     3121 gttgagacca gtgtcacaga actccgccgc gctcgccagc gtggcgccga gtatcataag
     3181 cattgcagag gcatgtcgtc attcccatcg ggcggcgtca atatcacggc gcggcacaaa
     3241 tttcatacct ccagcgccga attgcttcac acgccgccgg ttccgagctc gcgcagcgca
     3301 gtgatgaatt gaccagcgtc gctagccgtt cgcgctcgcg accgccgacc gtgtagagcg
     3361 cgatctccgc ggcgttcacc gcggcctgcg tcgtcaccgc cccagggccg ccattgcgtt
     3421 ttgacgcgtc atctcggccg tgacgatgtt cgcttggtgc gaccgatttt ccgaaaaact
     3481 gcccatatcc atcgtcgtct cgttacgccg cccggcggcc gctcatcgga gcgaggcgtc
     3541 tcacaccggt ccgcaacgac attccggatc aggcccccca ccggccgctc ccgctccgcc
     3601 gcagccgcta gcgtcgccct gagttcaggc atccagccgg atgctcgcgc actccttgcg
     3661 ctcctgcttc gctcgcctcg ccatggcgca aaacccccgt cgatattcga atgcccggtg
     3721 accgccgtga acaaagtcgg cgacgcacca acatcgataa ccaagatttt gaagcggcgc
     3781 cgcgataggc ggagggcacc tcaatatcgc catcaccggc agtcgcgatt ttcccccacc
     3841 ccctcggatt ccgaaaggtg gtcggaggct tgccgggtta cgcggccaaa gctcaggttt
     3901 ggccaagctc gagcgcgcac aagctctttc gtctccaacg gatcacactt ggtaaaacgc
     3961 gacgcgcgcc accgtggtga ccgactcgat cgaagtggat gtctatccag ccggcggtaa
     4021 cgagctcgtc atcgtcggcg gcagacacgg tgcggacacc gcgagcgtca tgtcacaaat
     4081 cgactgttgc acacgcactt attgctcgga ccacgtgatc gagcaacgca ggtcgacatc
     4141 agctgccaag aacgcgctgc gcgcgatgtg ctcgacgcag gcaagagcat cccgcctggt
     4201 tggcatcctt tgaggcgctg ttacccctta acatcaggac gcctctagtc cgccaccacg
     4261 tcttatacct taactttgcc ggcccttgat attttattgg cgtcaaggtc agttggcggt
     4321 cttcgagggc cgaccaacta tgccgaaggc cgccaatttt aaagggcggc ggtgctggag
     4381 ggcgagttgg cgatcgtcgg cgggtagtgt ctcaggtcaa gtgtcacaag gggcagccca
     4441 atgcgctctc ttctatctgc ggcttttctc gtgctcgctg taggggcggc taaccctcag
     4501 caagagcaag gcgcgatgac cggcgttggc atgacttcat gcgccgagtt tgcccaaaaa
     4561 tatcgcgagg acccgaattt tgcgcacact ttgtatttcg tttgggcgca aggcttcatg
     4621 tcgggcctca acttgatgca gctcgcgctt aaagggccaa tgcacgatct caatggatgg
     4681 cctttttctc aacagcaact tcacataaga acgttttgcg accaaagacc actttcaacg
     4741 gtggctcagg cggttaggag cgttttcaac gctctcccgg aaatccagcc aaaatcaagg
     4801 tgagacacct cctgccgatc acattgacga atattctgga ttgggtatcg cgaccctatg
     4861 gcaagaatct ttgggcgggc aaacccgctg gtatggtggg cgcatcggtc agggccgtcg
     4921 gcacggtagt ggcgcagaca catctgcgca gcgtgctcgg ctactttgat gtgcccacac
     4981 tcgggcagcc ggaagtattg cgcatcgcgt ccgttccccg cgtctatacg aaatcgaatt
     5041 ttctcaggcc ggcgacccgg gcaaatgcgt caacgctacc gtgcttccgt tgagacggct
     5101 tgctccagca agcgatcgac gagagcaaca atttcattct cattgattgc cgccatgcag
     5161 gcactttccc tcccgcccgt gagttggcat ggaatgtctt cgttccgcca gcaaggcatg
     5221 cacttgaagg cacggccgag agaaacgacg tgcgttttgc cgtgatgctt cgttcggatc
     5281 acgccatcgg tagggccgaa aagagccacc gttgccatgt cgagcgcgcc tgccgcgtgc
     5341 aaaaaggttg aatcgacaca tacggcgagg ctgcatttgg caaatgtagc gagcgcatcg
     5401 cccaacggtt ggccgaacgc agggacaata ttttcgtgcg gaggcaacgg gaacgcgacg
     5461 tgatggaaca cgatgacctt atacctttcg gccagccgtt caatcagtgc ccccatgcgc
     5521 ggatagtccc tgtatgtctc gcgagagaag gcgtggacgg caatgatcgg ccaccgacca
     5581 ttgagatcgt gctcggcgaa gaatgcatcc gcggcgttct tgctctctgt ggtaagttca
     5641 agccgaggtc gcaatcccga agccttcagt tgcttatcag cgatgcccat gccgcgtgca
     5701 aacagttcga tccgtccttt ttttattctc ggacgatggc gagattcata gctcgcggct
     5761 gggcagaagg agaggtcacg ccaagcgcgg tagcgttgcg ggtcgagcgg tgctccgtcg
     5821 atgtcgtgta actggacatc cgtgttgtcg gcgaacagcg gaaagaagga ttttttgatg
     5881 gcaaaatgga cgggctggcc cgttcgttgc gcaagggccc gcaatcctgg tgtcatcgtg
     5941 ataatatcgc ccattccgcc catagcccga gtgacgagaa ctgtcgcttc actcgcatgt
     6001 ggcggctcag gcgctgcctg cagtccattc agccgatgcg gcgcgagcga catgataaaa
     6061 gtgacgacgg caccaacttt atccacgcca atttgtttga gccttcgtag tcgccgtccc
     6121 atccgcgacc ccgcctcgcg ctgcaactcg gtgcgagtcc gagcgagata ggcgagcagg
     6181 cgaggaacga cgttagaggg tatggaatct gcaggcgtta aatgcaaagc gcccgcaaag
     6241 gtacgaaacg ccaaacccgc ctgtagcggc gacgcgtgta cgcatacgga gagaccgcgc
     6301 cacgcgctgg cggcggcctc gctgtggcga cccatcatca tcagggcacg ctgctggagg
     6361 gccagcacag caagtctgtg ggacagattt ccctcgatca aataaggacg ttcggcgaca
     6421 tggcgaacag tctcaagggt gcgctcaggc tcattgctct cgagcagggc actagccttg
     6481 acaaggtaca ggcgcagcat ctcatcgggg tagttgctaa ttggggaccg ttcgagcgca
     6541 tcaacaagac tgaaaaattg ctcggcgaat tcagtttgcc cgcggtgaaa ggcgaggcag
     6601 ttgcccacca acgcgtcatg caaatgatcg acgatcatct tgcaatcgga aggacgcgca
     6661 agggtgaacc ctgacgcact ttggggggtc cgttggaacg cctcgattaa ggcccggaga
     6721 tggacaatcc gttttctttc ctctggcgta agtatgtcgc gttccggtgt gccaaacacc
     6781 tgcgcgccgg tttggcctaa ggacgtttgg tgcgtctgag tgctcatctc agttgctgca
     6841 atatgctgtc tttggggcag attttggcca gttggctgtg atggccgttt gccaagcgac
     6901 ccgattgtgc gaaatgaagt gctgtgcttt tgcgcgcgcc ttggtggcca tggtcaaccg
     6961 cgatatgcga tcgtcacgaa gccggcgtag cacccccgct gccgattcaa tgtcgggctc
     7021 ggcccaatgg ctatcggcaa gctggtaggt gccttgcggg tcgtgaacgg ggatcaggcg
     7081 atacccgatg agcaggctgt cttcgggcgt catgaaatcg atattgccgg accagttggt
     7141 ggcaatgacc gggcgtccgg cagccatcgc ttccagcaat gtgaggccaa atccctccga
     7201 gcgatgtaac gacaggtaca catccgcagc ctgcatgacg gagccgatcg acgtaccgat
     7261 gttggtatag aggcggatgt tgttgaagcc cgcgatttgg ctcctgatga gagcgagacc
     7321 ggccggatag gcgtcgagat cgaggcagcg taggatgagg caggcacttg gatcacgccc
     7381 aaacgcatgt ttgaaagcgg caatggcggc gagcgggttc ttgcgctcga aattggagag
     7441 catggcaaag gcaaaagccg cgacgaagtc cgagcttcgt atgcccaacg cctctctcgc
     7501 cgcgaactgt gctcgtttgt cgatgtcggg ctcacagggg acgctcagca cgtgcggaac
     7561 gatgcgaacg ggccggtcga tcgctctcga caaggcctcg gcggcaaagc gcgagggggt
     7621 ccacacctca tgcacgtagc gtgcgccgtc gatccaatcg gccggcacgt tctcgagctc
     7681 ccatgcccaa tatccgacga tcagcttgtc gcgcacgagg tcgcggccga tatgccagag
     7741 cgcacgcgac acctgcggac cattgatgtg gacgatgaga atgcccggcc ccagtcgaac
     7801 gggatggtca gcgatgtcaa ctggaacacc gcccgcgacc ttgagctgat cgcataggtc
     7861 gatgatgccg acggcgtagc cggcatcgcg caaggcatcg ccacacagcc gggccgattg
     7921 accaagcccg gttgggcttt tgagcagccc ggcaacagca atgttgtcga gcgacacgag
     7981 gggggtgcgt gctggaggca cgagcgagcg gagggcaacc gtcttcaaag tggccaagtg
     8041 accccgccaa ggcagcgtaa gacgtggggg acgtggcagc atcaggatgg ctcccggccc
     8101 gcgatacgct ccagagtaca gtgattaggc aatgttatca gggcgcgtag gcatgaatcg
     8161 acattgttga ggtttaacgc ccatcgaaac gacctcttgc gctgcttctg cgggcgtccg
     8221 cgcccatttg agcttgcatg ggccaagctc ataatggttg ccgactgcga tgtaaccgcg
     8281 gccgcgcggt gccaactggc cacggcggta ctgcgtgcgt ctaagatcag cgcctacacg
     8341 ggcgagcttg cgaagcaggc tctccgcgag cttggtgcac ggagcaaatg tttttctggg
     8401 ctgcctcata ggtgattgag gcgctgcgcg cttgcagcga agcggcgctc agccgatcca
     8461 atgctgatgg gaggtcacgc cttttttatg atgaggccga agcaggtcac cgcgaaaccg
     8521 tcacacgcag ctttgatatg attgttattt cccccccaat cggtgtgctg gaatggtgtc
     8581 atgtcatgcg aatagggcgg gaggtcgata aatcgatcaa gaatcttatc cccaactgag
     8641 aagtcaaggg gggctacgtg atggccgctc cctcttagcc gctctgcgag ttggttgaaa
     8701 tgctcgcgct ggaacagaac tgtgccccag ttatcgatag tcgcgttgtc gttggcgtaa
     8761 ttgtattctg ttgtgtggat cgcaagcccg ccaacacgaa gggtattaag agagttttct
     8821 atgaacgcca atccgcgttt gatgctgcca atatgttcta aagcgcaaat ggaccagcaa
     8881 aagtcgtaat cgcggagtgt cgcgggaatt gcgttcatat ctacataatt gagactgacg
     8941 tatttcatga agcgatcgcg gtcgacgagt tcagccttgt aagcgtgttc taaagtcgcg
     9001 gtgtactgat tagaatcgtg ccagccggtc tttgcgctat catcaggcgg gaggtcggtc
     9061 accgtcacgg ccacatcatg ggacgcgaga tagctcggaa taggctcgat accgcagcca
     9121 aaccccagac cacgctttcc cgattccatg cagccatgtt cccacagggc ttgcagaacg
     9181 taagcgaatt cccacagctt gcggtggaag acaacgggca ctttcaactc actggcccag
     9241 taggcagccc aatcactctc aagatccgac tgcgttgatg ccttggattt caagccgacg
     9301 tgtgttggtg cgagcccttg tcggggcgga agagcggcag caagttgccg cgcgatctcg
     9361 tagccgaaga acttgatgtt gagtttaatg agatcaatgt ccttggcgat gcgccacagc
     9421 tcattgatat tcgggttgcc cttgttgtcg acgagggccg tgagttccct gaaccgcttt
     9481 tcgaggtccg atgaaatagg gacttcgtcc tgcgaaatag acacctcttc cggcgccgga
     9541 ggtttcgcgg ttgctacagc ttttatgcga tcagcgaagg acgatatccc gtggcccatg
     9601 agtcttccca agccgggacg gcgtagagca ccacgagccc attgagcgac tgaacggttc
     9661 gtcacgcacg ccctcgtcca aattgatcat aaggatccgt cgacatcatc gtcctctctt
     9721 ggacgatgtc gacttgacgc tataccacat gtgccaacgc cgtgcacggc tgttcatatc
     9781 cgcgatcgtt tcgccttctc aaattggccg gcgtgagacg ttatcgatat atcgatcacg
     9841 gatctggtcg gcgtgttgat acagcatgca gccgccgcgc gaggtcattc cttattcgat
     9901 cgatgtgttc tgggtaatct ggcgcgatgt cgtcctcttg gcccaaaacc gctgcgccag
     9961 attgtcgtgc tgacggtgat cgccccgccg gtgcgcgacc gattctgctg ctggttccgg
    10021 gttgctgctg a
//
LOCUS       DATILV010000516         4142 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3442012, whole genome shotgun sequence.
ACCESSION   DATILV010000516 DATILV010000000
VERSION     DATILV010000516.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4142
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3442012"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(190..489)
                     /locus_tag="VLJ17_11650"
     CDS             complement(190..489)
                     /locus_tag="VLJ17_11650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23670.1"
                     /translation="MPCTDSSWSSRFCSILLGATAAGRDEAVIADPKLSRFTTRSDVW
                     NPRSKGVGIKPGQSELRAAVRSYVSSGAATKDWFLPADGTRTFGTAQRGTFIKLP"
     gene            642..1910
                     /locus_tag="VLJ17_11655"
     CDS             642..1910
                     /locus_tag="VLJ17_11655"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HSV23671.1"
                     /translation="MFKILQAVSVRHATWWIVVVLLLATAQAKADEPIKIGFGMALTG
                     PLAANGKMSLVAMQIWENDINAKGGLLGRPVKLVYYDDQSSPAQVPSIYAKLLDIDKV
                     DLIVSGYASTQIAAAIPVAMQRKKLFISLFGTGVNETFNYPKYFSMIPNGPTPKPAFT
                     RGFFKVAEVQTPRPQTIALAHADAEFGQNACEGARENAKTSGFKVVYDRSYPPTTTDF
                     NPIVRAIQAANPDLLVICSYPLDTVGMVRAMKEVDFKPKMWGGAMVGLQATVFKQQLG
                     PLLNGVVNYDTWLPVKSMEFPGAMELLKKYQERAKAAGTDPLGYYMPVWAYAYLQVLG
                     DAITASKSLNDDVLADYIHKTRFATVVGDVKFGKQGEWEEERTLAAQFQNITSNSIDD
                     FRELKTEVIIYPPKYKTGEVIYPYEKAIAK"
     gene            complement(1990..2232)
                     /locus_tag="VLJ17_11660"
     CDS             complement(1990..2232)
                     /locus_tag="VLJ17_11660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23672.1"
                     /translation="MTSCDDVDELISARQHLRPAWRPSIRQRHFNEGLFNGFDFTTML
                     RIGSMNMALHGVDGANVTHRDSPRRDVAAQASNASP"
     gene            2404..2607
                     /locus_tag="VLJ17_11665"
     CDS             2404..2607
                     /locus_tag="VLJ17_11665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23673.1"
                     /translation="MLDYLPVGSHGDPVLDFSQLTRDQAAALVEVTAKISLTAVARTP
                     ASFVGSGSSWPTGSTRWSCSETL"
     gene            2721..3197
                     /locus_tag="VLJ17_11670"
     CDS             2721..3197
                     /locus_tag="VLJ17_11670"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HSV23674.1"
                     /translation="MSAARTRKPAFQASPTNPNIQEIQTEPDRRPDMPYAPAIRVESP
                     CGLLFISGATPSPLYHKHPHVITEHDHPNRIEDQTRRCLETVKSILEHEGLTFTDVVK
                     ITKYMTDIRDQDGMVEVLKEYLGNWTPASTTVCVNQLSTPGARIELDVIAAFSPGK"
     gene            3872..>4142
                     /locus_tag="VLJ17_11675"
     CDS             3872..>4142
                     /locus_tag="VLJ17_11675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041204923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23675.1"
                     /translation="MAVARRKGGSFEAIHQFLSTLFSEDVHAERVYSLANATLGVISS
                     ASLAVNTIGQGLALARGRLPKHAIKQVDRLLSNPGIDVDELSKRWV"
BASE COUNT          900 a         1207 c         1223 g          812 t
ORIGIN      
        1 ccgcgccaaa attaaatccc catagcgctc gctgctcagc cggtgccata cttcccgcga
       61 cttcgtgcct tggcgctttt cagccgccgg ccgcctcacc gcgtggttag accgtcattc
      121 cggcggcaga aaacctgcac acgagcggtc ctagtcggtt cttgcaccct ctcgcctgac
      181 cgtggcactt tacggtagct tgataaaggt gccgcgctgg gccgtgccga aagtccgagt
      241 gccgtcggcg ggcagaaacc aatctttcgt cgccgctccc gacgaaacgt agctccggac
      301 ggcagcgcga agttcgctct gtcccggctt gatgccgaca cctttgcttc gtgggttcca
      361 cacgtcgctg cgggtcgtga agcgggaaag cttcggatcg gcgatcaccg cctcgtcgcg
      421 gccagcagca gtagcaccga gcaggatcga gcagaaccgc gatgaccagg atgaatcagt
      481 gcagggcatc ctggtcgccg gcgccgatca gaggcgcgtg cgccggatgg acgtgcaaat
      541 cgacccgcgt gatgcatgac tcgggctagc attgtatgct gaccatgttc ggttaggaga
      601 ctgcggtaac ggggaatctc gacacccata cgaggcggca aatgttcaaa atattgcaag
      661 cagttagcgt tcgccatgcc acgtggtgga tcgtagttgt gctattgttg gcgaccgcgc
      721 aggccaaagc cgatgagccc atcaagatcg gctttggtat ggcgctgacc ggtccgctcg
      781 cggccaacgg caaaatgtcg ctggtggcga tgcagatttg ggagaacgac atcaatgcca
      841 agggcgggct gcttggccgg ccggtcaagc tcgtttacta cgacgatcag agcagcccgg
      901 cgcaagtccc tagcatctac gcaaagctgc tcgacatcga caaggtcgat ctgatcgtca
      961 gcggctatgc ctcgacccag atcgcggcgg cgataccggt ggcgatgcag aggaagaagc
     1021 tattcattag cctgttcggc accggcgtca atgagacgtt caactatccg aaatacttct
     1081 caatgatccc gaacggccct accccgaagc ctgccttcac acgcgggttc ttcaaggtgg
     1141 ccgaggttca aacgcccagg ccgcaaacga tcgccctcgc gcacgccgac gctgagttcg
     1201 gacagaatgc ctgtgaaggc gcccgtgaga acgcgaagac atcgggtttc aaggttgtct
     1261 acgacaggag ctatccgccg accaccaccg acttcaaccc gatcgtgagg gcgatccagg
     1321 ccgccaatcc ggacctgctg gtcatttgct cctatccgct tgataccgtc ggcatggtca
     1381 gggcgatgaa agaggtcgac tttaagccga agatgtgggg cggcgcgatg gtcggcctgc
     1441 aggcgacggt gttcaagcag cagcttggcc cgctgctcaa tggcgtcgtc aactacgaca
     1501 cctggttgcc ggtgaagtcg atggagttcc caggcgcgat ggagctgctc aaaaaatatc
     1561 aggagcgggc caaagccgcc ggcacggatc cgctcggcta ctatatgccg gtgtgggcct
     1621 acgcctactt acaggtgctc ggcgatgcta tcacagccag caagagcctc aatgacgatg
     1681 tacttgccga ctatatccac aaaacgagat tcgcgacggt ggtcggagat gtgaaattcg
     1741 gaaagcaggg agagtgggag gaggagcgca cgctggcagc ccaatttcag aatatcacaa
     1801 gcaacagcat cgatgacttc cgcgagctaa agaccgaggt gatcatctat ccgccgaaat
     1861 ataagaccgg tgaagtgatc tacccgtacg aaaaggcaat cgcgaaataa gatcttttac
     1921 atctttgccg agagccggaa ttgggcggtc cactgagttt ccggtcaatt cggctgctcc
     1981 tccattgcat catggtgagg cgttgcttgc ttgagcggca acgtcgcgtc gcgggctgtc
     2041 gcgatgggtg acattcgcgc cgtccacgcc gtgcaacgcc atgttcatcg atccgatgcg
     2101 cagcatcgtg gtgaaatcga aaccgttgaa caggccctcg ttgaagtggc gttggcggat
     2161 tgatggccgc catgctggcc tgaggtgttg gcgcgccgaa atcagttcgt ccacatcatc
     2221 gcaggatgtc atcaaagcgc gcggcgctcg attctctaaa cttcgcagcg ccgattcgcc
     2281 aaatcctcgc ccgcgccatc gcgcacccaa tcaactcgac aaccgagcgc gtttttacac
     2341 agcctaaacc attcagacaa cccgacgatc agggcggaac tttcgcgcgg cgcccgcgcc
     2401 aacatgctcg actacttgcc ggtcgggtcg cacggcgatc cggtgctgga tttcagccag
     2461 ctgacgcgcg accaggccgc agcgctcgtc gaagtgacgg ccaagatttc gttgacggcc
     2521 gtggcgagaa cgcccgcgag cttcgtcgga tcaggatcaa gctggccaac aggatcgacg
     2581 cgctggagct gctcggaaac actataagct ttacgtcgac ccgcacgagc aggacttcgg
     2641 cagcgccggc cttgccgcgc gtttcgagtg attcgatata gtcgggaacc gaagagatac
     2701 gatctttgac cggagtaatc atgagcgcag ctaggacccg gaagccggcc tttcaggcct
     2761 cgccgaccaa cccgaacatc caggagatcc agaccgagcc ggatcggcgt cccgacatgc
     2821 cgtacgcgcc ggcgatccgc gtcgaaagcc cgtgcggcct gttgttcatt tccggtgcta
     2881 cgccgtcgcc gctgtatcac aagcacccgc acgtcatcac ggagcacgat cacccgaacc
     2941 gcatcgagga ccagaccagg cgctgcctgg aaacggtcaa gagcattctt gaacacgagg
     3001 gcctgacctt caccgatgtc gtgaagatca cgaaatacat gaccgacatc cgcgaccagg
     3061 acggtatggt cgaggtgctg aaggagtatc tcggcaactg gacgccggcc agcacgactg
     3121 tctgcgtcaa ccagctctcc acgccgggcg cccgcatcga actcgacgtg atcgccgcgt
     3181 tctcgcctgg caagtgagac ctcattatga caccgcgtct actctccgct ctccggcgcg
     3241 ccctctcgca gtacaggggc gcccgccgac caggatcgat tctcgatcaa gttagcgtga
     3301 tgcagccgaa tttgcatagc gtgcgacccg ttcctcatgc gccatctcga acctcgccga
     3361 aaggtggaga tgcgtttcgc tgatgtagat caacggatca tgggcacatc aggtttatgc
     3421 gagtgccgcg agaatgtcgt cgttcaaaac gaatagcgtg cgtcctccca aagtgtgcga
     3481 gttgctttga ggccagggga gctttcgtta tgaaaatcag tcgcaacatg cttgcgggcg
     3541 cggacctgtg gcactaaact aacgtgcatt gctggcaagc tgagcggagt tgacaaaact
     3601 caatgcgcgc aggccactca tgtggtgaat ttacgcaggc gcctttcatt cgaaaccggg
     3661 agctttcttc acccgttttt gcgagggaaa aagacctgat agcccttagc catctcctca
     3721 ttttctgaaa taaaagaaac tggcggggtg cgaaatcatt gcgaaaagaa ttcggatctg
     3781 atttttttga agcctgcgct gattgtagct tgaacgctgc aagagaaccg gagagtctgc
     3841 catccagatc acgtgaatca ctgggtggat gatggcggtg gcgcggcgca agggcggttc
     3901 gtttgaagcg atccatcaat ttctgagcac attatttagc gaggatgttc atgccgagcg
     3961 ggtttattcg ttggcgaacg ccacgctcgg ggtcatcagc agcgcgtctc tggcggtaaa
     4021 cacgatcggg caagggctag cgttggcgcg gggacgactg cccaaacatg ccatcaagca
     4081 agtggatcgg ctgttatcga acccagggat tgacgttgac gaactctcga agcgatgggt
     4141 cg
//
LOCUS       DATILV010000517         2869 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2165882, whole genome shotgun sequence.
ACCESSION   DATILV010000517 DATILV010000000
VERSION     DATILV010000517.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2869)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2869)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2869
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2165882"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            16..2277
                     /locus_tag="VLJ17_11680"
     CDS             16..2277
                     /locus_tag="VLJ17_11680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HSV23676.1"
                     /translation="MTTVEEVSSVEPAQRPTGATRFATGMIGLIAVVVALLSALATFM
                     VLTNLTFVNPTHNVVVTLLAVNFFAVLLLLAIIGREVWHIVQARRRGRAGARLHVQIA
                     GLFSVIAVLPAVLVAVVASVTLDRGLDRLFSIRARVVIENSVIVAQAYLNEHEQSLRA
                     ETNAMAIDIGRAKALFDQDADRFRQFFTAQASLRNVPTAMMLGPDQSVIVKADIQLPP
                     ELQEPPPPPVERLAQVDDTEAAAGLLRDTNCVGAIIKLKGYQDAYLFVARFIDPRVLE
                     QIQQTEDSIQEYANLEARRISVQLAFALMYTVIALTVLLSAVWIGFAFANRLVAPIRR
                     LIGAANLVSTGNLHVQVPVRRSEGDLSQLGATFNKMTQELRTQRNDIMRARDLVDSRR
                     RFTEAVLAGASAGVIGVDASGHVSILNRSAEKLIGSGEADALGHSLDEVVPELKKLVD
                     PASNGGQRLVQGQITIHRSGRDRTVSVRVTSEQSADSGHGYVVTLDDITELVTAQRTA
                     AWADIARRIAHEIKNPLTPIQLSAERLRRKYGKSISEDRAVFEQCTDTIVRQVDDIRR
                     MVDEFSRFARMPKPVMMADDVTDTVRQVAFMQRVSNADIDIEVEIAEDPMPARFDRRL
                     ISQGLTNIIKNAGEAVAAVPADQIGRGRIVVSAARIDSDIVIDVIDNGVGLPKENRSR
                     LLEPYVTTREKGTGLGLAIVGKILEEHGGRIELHDAAERFPGQRGAWMRLRFAAEPIE
                     IFVNETKNQLSGQ"
     gene            2280..>2869
                     /locus_tag="VLJ17_11685"
     CDS             2280..>2869
                     /locus_tag="VLJ17_11685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV23677.1"
                     /translation="MASDILIIDDEADIRELVAGILEDEGYATRTARDSDDAAAAIAA
                     RRPNLIFLDIWLQGSRLDGLQMLSNIKADHPDLPVVMISGHGNIETAVAAIKQGAYDF
                     IEKPFKVDRLVLVADRALETSRLKREVKQLKQLAPHPAMLVGASGVMQHLRQTIDKVA
                     PTNSRILIVGPSGSGKELTARTIHASSTRAAAPFVV"
BASE COUNT          572 a          876 c          879 g          542 t
ORIGIN      
        1 gttcccgggg gagcgatgac gaccgtcgaa gaggtttcat ccgtcgaacc tgctcagaga
       61 ccaacgggag cgacgcggtt tgccaccggc atgatcgggc taattgcggt cgtggtggcg
      121 ttgttgtcag cgctggcgac attcatggtg ctgaccaacc tcaccttcgt caacccgacc
      181 cacaatgtcg tggttacctt gctggctgtg aatttcttcg cggtactgct gctgcttgcg
      241 ataatcggcc gtgaggtttg gcatatcgtt caggcgcggc ggcggggtag ggcgggcgcg
      301 cggctgcatg tccaaatcgc tgggctgttc tcggtgatcg ctgtcttgcc tgccgtgttg
      361 gttgcggtgg tcgctagcgt cacgcttgat cgggggctcg atcgtctgtt ttcgatccgc
      421 gcccgtgtgg tgatcgaaaa ctcggtgatc gtcgcccagg cctacctcaa tgaacacgag
      481 cagtcgctcc gcgctgaaac caacgccatg gcgatcgaca ttggccgggc caaggcccta
      541 ttcgatcagg acgccgaccg gttccgtcag ttctttaccg cacaagcgtc gctccgcaac
      601 gtgccgaccg ccatgatgct cggacccgat caatcggtga tcgtcaaggc cgatatccag
      661 cttccgcctg agttgcagga gccgccgccg ccgccggtcg agcgactagc ccaggttgac
      721 gataccgagg cggcagccgg tctcttgcgg gataccaact gcgtcggagc aatcatcaag
      781 ctcaaaggct accaggatgc ctatctgttc gttgcccgct tcatcgatcc gcgggtgctt
      841 gagcagattc aacagaccga ggacagcatc caagaatatg ccaatctcga agcgcgacgg
      901 ataagcgtgc aactcgcctt tgcgctgatg tacaccgtca tcgcgctaac ggttctgttg
      961 tcggcggtgt ggatcggctt tgcgttcgcc aaccgactgg tggcgccgat ccgacggctc
     1021 atcggagccg caaatcttgt atccaccggc aatctccacg ttcaggtgcc ggtgcgccgt
     1081 tcggaaggag acctctctca actcggcgca accttcaaca agatgactca ggaattgcgc
     1141 acccagcgca acgacatcat gcgagcgcgc gatcttgtcg acagccgccg ccgcttcacc
     1201 gaggcggtgc tggccggagc tagcgccggc gtcatcggcg tcgatgccag cgggcacgtc
     1261 agcatcctca atcgatcggc tgaaaaattg attgggtccg gcgaagcaga cgcgctcgga
     1321 cattcgctcg acgaggtcgt gccggagctc aagaaactgg tcgacccggc aagcaatggc
     1381 gggcagcgcc tcgtccaagg ccagatcacg atccaccgca gcggccgcga ccgcaccgtc
     1441 tcggtgcgtg tcacctccga gcagtcggcc gattcgggcc acggctacgt cgtaacgctc
     1501 gacgacatca ccgagctggt gacggcgcaa cgcaccgccg cctgggccga catcgcgcgc
     1561 cgcattgccc acgaaatcaa gaacccgctc accccgatcc agctctcggc cgagcggctg
     1621 cgccgcaagt acggaaagtc gatttccgag gatcgcgcgg tattcgagca atgcacggat
     1681 acgatcgtgc gccaagtcga cgacatcaga cgtatggtcg atgagttctc tcgctttgcc
     1741 agaatgccga agcccgtgat gatggcggac gatgtcaccg acacggtgcg tcaggtcgcg
     1801 ttcatgcaac gggtcagcaa tgccgacatc gatatcgagg ttgagattgc agaagacccg
     1861 atgccggcgc ggttcgatcg ccgattgatt tcacaaggtc tcaccaacat catcaagaat
     1921 gcgggagaag cggtcgcggc ggttccggcg gaccagattg gacgcggtcg catcgtggta
     1981 tcggccgcgc gcatcgattc ggatatcgtg atcgacgtca tcgacaacgg cgtcggcctg
     2041 ccgaaggaaa accgaagtcg ccttctggag ccttacgtaa caacgcgcga aaagggcacc
     2101 ggcctcggtc tcgcgatcgt gggaaaaatc cttgaagagc acggcgggcg aatcgagttg
     2161 catgatgcgg ccgagagatt cccgggccaa cgcggcgcgt ggatgcgact gcgattcgcc
     2221 gcggagccga tagaaatttt cgtcaatgaa accaagaatc aattgagcgg gcaataagca
     2281 tggcgtcgga tatcctgatc atcgacgacg aggccgatat ccgcgagctg gtggcgggaa
     2341 tcctcgaaga cgagggttac gcgacgcgca ccgctcgcga cagcgacgac gcggcggccg
     2401 cgattgcagc acgtcggcct aatctgatct tcctcgacat ctggctgcaa ggcagccgcc
     2461 tcgacggcct acagatgctt tccaacatca aggcagatca tccagatcta cctgtggtga
     2521 tgatttctgg acacggcaac atcgaaaccg cggtggcggc gatcaagcaa ggtgcttacg
     2581 attttatcga gaagccgttc aaggtcgacc gtctcgtcct cgtcgccgat cgggcgcttg
     2641 aaacctcgcg gctcaagcgc gaggtcaagc agctcaagca gctggcgccg catccggcga
     2701 tgcttgtcgg cgcttccggg gtcatgcaac atctgcgtca gaccatcgac aaggtcgcgc
     2761 cgaccaatag ccgaatcctc attgtcggac cgtcgggttc gggcaaggag ctgacagcac
     2821 gtaccattca cgcctcctcg acgcgtgcgg cggccccgtt cgtggtgat
//
LOCUS       DATILV010000518         4057 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_891447, whole genome shotgun sequence.
ACCESSION   DATILV010000518 DATILV010000000
VERSION     DATILV010000518.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4057
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_891447"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..759)
                     /locus_tag="VLJ17_11690"
     CDS             complement(<1..759)
                     /locus_tag="VLJ17_11690"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: protein motif:HMM:NF012690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HSV23678.1"
                     /translation="MITEKLPEGLTFDDVLLVPARSDVLPTETDTSTQFTRGIRLQIP
                     LCSAAMDTVTEASLAIAIAQQGGIGVMHKNLSIDRQAEEVDKVKRSESGMIVDPVTIW
                     QDRPVREALDVMQRYHISGVPVVDEDGHLVGIITNRDLRFEERFDLPVSEVMTKQPLV
                     TVSVGTTLDQAKQVLQKHRIEKLLVIDEDKHLKGLITVKDIQKAIKYPTAAKDDLGRL
                     RVAAAIGATGDFRERADELVRARVDCLVIDTAHGH"
     gene            complement(1022..1519)
                     /locus_tag="VLJ17_11695"
     CDS             complement(1022..1519)
                     /locus_tag="VLJ17_11695"
                     /inference="COORDINATES: protein motif:HMM:NF024252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSV23679.1"
                     /translation="MRLARETRGIALRDISDQTRISMRYLEAIEADDYGRLPGGIFNR
                     SFVRAYAKFIGYDEDQAIDEYARTLRERGEPDEDSPTKPYKSLVYTEHNRSPATTLLL
                     ALMILAVLSLCVWAGLHFYQRRFAPKTRSGTGQRFAPGRPGPNGFNRIPGDYRTEEGE
                     HEFTV"
     gene            1821..2087
                     /locus_tag="VLJ17_11700"
                     /pseudo
     CDS             1821..2087
                     /locus_tag="VLJ17_11700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001183618.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="BMC domain-containing protein"
     gene            2350..>4057
                     /locus_tag="VLJ17_11705"
     CDS             2350..>4057
                     /locus_tag="VLJ17_11705"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HSV23680.1"
                     /translation="MSADKDLISVQQARDLVEAAHRAQAELARFDQQKINHICEAMAQ
                     AALRESPRVAALAVEETGYGVPADKQEKNRFAAEDVWNYFKNLRTVGVVSETKDVVEI
                     ASPRGVVAGIIPSTNPTSTAIFKILIAIKSRNAIVLSPHPSAARCINETVKAMRDAGA
                     KAGLPAEAIGCMTTATIEGTEALMKHKMTAVILATGGIGLVRAAYSSGKPAFGVGPGN
                     VPVFIERSADVPKAVQDILTGKCFDNGTICASEQAVVVDAPIEMAVREQFKLQGGYFI
                     NQSEADQLAKVVATPQRTLNPAIVGKSVEVIANIAGISVPPGTRCLMTDVAGVGRDYP
                     LSMEKLSPILAFYVEDGLERGAARCNEVLHYGGMGHTAGIHTRSREAAVHYGSEMPAS
                     RVTVNTPTTHGAIGFSTALPPSMTLGCGSWGGNVTSDNVSPLHLMDIKRVAFETRPVQ
                     SKRPAVALQPAITPRQPATVRSAPAAATSGGAGTPKVSRQEIAAIVDRFLANRPESAP
                     LPSAPTAPPPDYSAGGNGGVAREPANAPSQSAANGRKAAEFVSEDDVRQAIQKGEKIY
                     VGP"
BASE COUNT          877 a         1175 c         1169 g          836 t
ORIGIN      
        1 gtgaccgtgc gccgtatcga tcaccagaca atcgacgcgt gcccggacca attcgtcggc
       61 gcgctcgcga aaatctccgg tggcgccaat cgccgccgct actctcaggc ggcctaaatc
      121 gtctttggcg gcagtcggat acttgatcgc cttttgaata tctttgaccg tgatcaagcc
      181 cttcaaatgc ttgtcttcat caatcaccag aagcttttcg atgcgatgct tttgcagcac
      241 ctgcttagcc tgatccaggg tcgtgcccac cgagacagtc accagcggct gcttggtcat
      301 gacttcagag accggcaaat caaaacgctc ttcaaaacgc agatcgcgat tagtaataat
      361 gcccactaaa tgtccgtctt catcgactac gggcacgccg ctgatgtgat agcgctgcat
      421 tacgtccagc gcttcgcgca ctgggcgatc ctgccagatc gttaccgggt ccacgatcat
      481 gccggattcc gagcgcttca ctttatcaac ttcttctgcc tggcggtcga tgctcaggtt
      541 cttatgcatg acgccgatgc cgccttgctg ggcaatggca attgccagcg atgcttcggt
      601 aactgtatcc atggccgccg aacagagagg aatctgcaag cgtatgccgc gcgtgaattg
      661 ggtcgaggtg tcagtttccg tcggcagcac atctgatcgc gccggcacca gcagcacatc
      721 gtcgaaagta agtccttcgg gaagcttctc agttatcatg actctataaa gttactcctt
      781 gggttttgct ttgcctaacc tggctcaaaa aagaaaacgc ccgctgttcg ctgcgggcgg
      841 ctccatattt tgaaagctgc caaatgaggt cagtaccgag agcggtagcg accgggtttg
      901 atccttaaga tctctagtcg cgtggagtat tgcgacccgg tcgctaccgc tctcggtact
      961 gacctcatga cggagcttcg gcgcactgcg aactcgcgca gcatcgttcc gaccctcgcc
     1021 cctacacagt gaattcgtgc tcgccctcct ccgtccgata atcgccggga atacgattga
     1081 acccgtttgg gccgggcctg cccggagcga atcgctgccc ggttcctgat cgcgtttttg
     1141 gcgcgaacct gcgctgatag aaatgaaggc cggcccagac gcaaagcgag aggacagcca
     1201 ggatcatcag cgccagcaag agcgtcgtgg ccggcgaacg gttgtgctca gtatagacca
     1261 gcgacttata aggtttagtt ggcgagtctt catcgggctc tccgcgttca cgcagggtgc
     1321 gagcatattc gtcgatcgcc tggtcctcgt catagccgat aaacttggcg taggcgcgaa
     1381 cgaagctgcg attaaaaatg ccgccaggca gcctgccata gtcatccgcc tcaatcgctt
     1441 ccaggtaacg catcgagatg cgagtctggt ctgagatatc gcgtagagca atccctcgcg
     1501 tctcgcgtgc gagtcgcaat ttttctccga tgctttccgc catttttagt cgagccggcc
     1561 tcagacaaca ctgatcatgc gaggggttga acagcctata aaatgaacga gtgccttccg
     1621 caccagaacc ttataaggca ccgtcaagct gttcgttgcc cgcactatag cgcccgctcg
     1681 taaacgttgt caaactttat tgattctgac cgtgacccct cttgattctt atcgcgcagg
     1741 gtggtagctt gagtcgttcg caaaaaccaa tctgctttgt ttttaacttc tacaatcttg
     1801 aaaagtgagg actgacggag atgtctcttg aagcactcgg aatggtcgag accaaaggct
     1861 ttgtcggcgc tgtcgaagcg gcggatgcga tggtcaaagc agccaacgtg caactgttgg
     1921 gtaaggaata catcggcgcc gggtatgtga ccgtgtttgt gcgaggagac gttggcgccg
     1981 tgaaagcggc gactgatgcc ggtgcagccg cggcccgacg ggtcggcgag ttgatcagtg
     2041 tccatgtgat cccgcgcccg cacgcggagg tcgagcgggt cctgccggtc gacggccgca
     2101 cgggattcag tcccgacgaa tcatcgcagc tgcagggcgg cgcgcgggga cagttgggcc
     2161 agggagaggc cagtcgctcg ctaactgcca gagaaagcgc gagagaaaga gccaagtaag
     2221 gtcattgccg atttttgatt gccgattgcc gattgccgat tggaactacg tcgatgacgg
     2281 cgtgattgac gggatcggag tcaggaaata ttcaaatcgg caattggcaa tcggcaatgg
     2341 aggttcgtca tgtcggccga caaagatttg atttccgtgc agcaggcccg cgacctggtc
     2401 gaagccgctc atcgagcaca ggcagagttg gcgcgcttcg atcagcagaa aatcaatcac
     2461 atctgtgaag cgatggccca ggcagcgttg cgcgaatccc cgcgcgtcgc ggctctggcg
     2521 gtcgaagaga cgggttatgg agtcccggcc gacaaacagg aaaagaaccg ttttgccgcg
     2581 gaagacgtct ggaattattt caaaaacctg cgcaccgttg gcgtagtttc agaaacaaaa
     2641 gatgtcgtcg aaatcgcgag tccgcgcggc gtcgttgccg gtattattcc atctaccaat
     2701 cctacctcca ccgcaatctt taaaatcttg atcgcaatca aatcgcgcaa tgcgatcgtg
     2761 ctctcgccgc atccttcggc agcgcgctgt atcaacgaga ctgtcaaagc gatgcgcgat
     2821 gccggcgcga aagccgggct acccgctgag gccatcggtt gcatgaccac cgccaccatc
     2881 gaaggcaccg aagcgctgat gaagcacaag atgactgcgg tgattctcgc caccggagga
     2941 atcgggctgg tgcgtgcggc ctattcatcg ggcaagccgg cttttggcgt cggccccggc
     3001 aatgtgccgg tattcatcga acgaagcgca gacgttccca aggccgtaca agacattctt
     3061 accgggaagt gcttcgacaa cggaacgatc tgcgcttcag agcaggcagt ggtcgtcgac
     3121 gcgccaattg aaatggccgt ccgcgaacaa ttcaagctgc agggcggtta cttcataaac
     3181 cagtcagaag ccgatcagct tgcgaaagtt gtggccacgc cacagagaac cctgaacccc
     3241 gccatcgtcg gcaaatcggt cgaggtaatc gcaaacatcg ccggcattag cgtacccccc
     3301 gggactcgct gtctaatgac ggacgtggct ggggtgggcc gcgattatcc gctctcgatg
     3361 gaaaaacttt cgccgattct cgcgttttat gtcgaggacg gacttgagcg aggcgcggcg
     3421 cgatgcaacg aagtacttca ctacggcggc atgggccaca ccgcgggcat tcacactcgt
     3481 tcgcgtgaag cagccgttca ctatggcagc gaaatgccgg cgtctcgcgt cacagtcaac
     3541 acgccgacta cgcacggagc gatcggtttt tcgacggcgc tgccaccatc gatgacgctt
     3601 ggttgcggat catggggcgg caatgtgact tccgacaatg tctcgcccct gcacctgatg
     3661 gacatcaaac gagtcgcgtt cgaaacgcgt cccgtacaaa gcaagcgacc cgcagtcgcg
     3721 ttgcagcccg cgataacgcc acggcaaccg gcaaccgtta gatcggcgcc cgcggcggcc
     3781 acatcgggcg gagccggaac gccgaaggtg agccgccagg aaattgcggc catcgtcgat
     3841 cgctttctgg caaatcgacc tgaatcggcc ccgctgcctt cggcgcccac ggccccaccg
     3901 cccgattact cggccggcgg caatggtggc gttgcgcgcg agccagcgaa cgccccttcg
     3961 cagtctgcgg caaacggacg taaggcggct gagtttgtca gcgaggacga cgtgcgacag
     4021 gcaattcaaa agggagagaa gatttacgtc ggccccc
//
LOCUS       DATILV010000519         2650 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2423177, whole genome shotgun sequence.
ACCESSION   DATILV010000519 DATILV010000000
VERSION     DATILV010000519.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2650)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2650)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2650
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2423177"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..400
                     /locus_tag="VLJ17_11710"
     CDS             <1..400
                     /locus_tag="VLJ17_11710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23681.1"
                     /translation="IAARPQLLLPGRTSSTGLISESSSPLRALGPSSAINVTIFAAAE
                     SQRRASTRTSDFRLERDKFASTSRKGRLTNPGTAEHGLFKQKQLIVVGESATPRVVRV
                     LTSFEVLLYDPDPQIEALWGALDHRRWISV"
     gene            372..959
                     /locus_tag="VLJ17_11715"
     CDS             372..959
                     /locus_tag="VLJ17_11715"
                     /inference="COORDINATES: protein motif:HMM:NF013232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23682.1"
                     /translation="MIIVVGLAFEARIAAGPGMRVVCGGDSRHLSATLAATIAEARTL
                     FGSCPGIISFGVAGGLAPQLRPGTCVIGSAILSGSNRMPTNQIWSQQLLRTFPDAVSG
                     VLLGVSAPICDPRRPNGTTNIGAMIKAVLMRPREIPALFQTAFDALAARVTLVRGRRL
                     LGPSLLLVNSLECDPVTANEPYLGPAIQTATMEGA"
     gene            1171..1848
                     /locus_tag="VLJ17_11720"
     CDS             1171..1848
                     /locus_tag="VLJ17_11720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23683.1"
                     /translation="MLSLLLLGLSIGIGNAQTTTTSQPREHVYLLRGFANVFSLGMDQ
                     IAAKLQQQGIHATVDNYLAWPSLAEQAAAEYKSGRTRAIILVGHSSGATAVTEMAARL
                     SQLGVPVKLAIGLDPTSRMTTTGHVDRYINYYIANGFGDPVDKGTEFKGVLQNVDLEH
                     MSNVSHFNIDKNNVLQGMVIKDILAAASAAPTQARSTCNLHGGGKGCGSPKPGALTDG
                     TVGSVGR"
     gene            complement(1887..2465)
                     /locus_tag="VLJ17_11725"
     CDS             complement(1887..2465)
                     /locus_tag="VLJ17_11725"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: protein motif:HMM:NF016107.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HSV23684.1"
                     /translation="MIVQTSETFQVIWIGWVVSWVAASLWSGRTEKRAVTRETWIYRI
                     VIFAGAILIAPWTAQVLGERPTWQVGYYGAYGFVGVMLMGLALTWWARIHLGGLWSSA
                     ITRKEKHRLIETGPYAFVRHPIYTGLIIALLATAAIEATLVALLGALLIALGLWVKAR
                     AEERFLSAELAPETYESYRRRVPMLVPFIPHR"
BASE COUNT          577 a          760 c          759 g          554 t
ORIGIN      
        1 aattgctgcg cgcccgcagc tcctattgcc agggcgaaca tcatcgacag gactgatatc
       61 cgaatcatca tcccccctcc gggcactcgg cccatcgtca gcaattaatg tcacaatttt
      121 tgctgctgcc gagagccaga ggcgcgccag cactcgcaca agtgactttc ggctagagcg
      181 tgacaaattt gccagcacga gccgcaaagg gcgactcaca aatccgggca cggctgagca
      241 tggtctgttc aaacagaaac agttgatcgt ggtaggtgag tcggcgacgc cgcgagtggt
      301 aagagttttg acgtcgttcg aggtattgtt gtacgatcct gatccgcaaa ttgaggcgct
      361 ttggggggct cttgatcatc gtcgttggat tagcgtttga ggcccgcatc gctgctgggc
      421 cgggaatgcg cgtcgtttgc ggtggcgaca gccgtcactt gtcggccacg cttgcagcga
      481 cgatagcaga agcgcgcacg ctgtttggga gttgccctgg gattattagc tttggcgtgg
      541 ccggcggtct tgcgccgcaa ctacgccccg gaacctgtgt tatcggttct gcgatcctct
      601 caggatcgaa tcggatgccg acgaatcaga tatggtctca gcaattactg cggacgttcc
      661 cggacgcagt gtccggcgtg ctgctgggtg tatcggctcc tatttgtgat ccgcggcgcc
      721 cgaacggaac caccaatatt ggggccatga tcaaagcggt cctgatgaga ccgcgtgaaa
      781 taccggcctt atttcagacg gccttcgacg cacttgcagc ccgggtaacg ctggtgcggg
      841 gacgacgctt gctcggtccc agtctcttgc tcgtcaattc ccttgaatgc gacccagtaa
      901 cagccaacga accctacctg ggacctgcaa tacaaacagc aaccatggaa ggtgcctaac
      961 ggcgccaagg tgttgcgccc ccaacacacc cgttgaaatt aatggctcgc caaaatcgct
     1021 gccgttgaaa cggcggattg tatgaagatt atgagcttaa ggggcgaaat ggttccatca
     1081 ggggcaaagc tcatgaagtc tttgggcagc tgcacccggc cgggtcggtt ttcgtgtttg
     1141 gctcggcgtt ggcatcgacc gcgctccgcg gtgctgtcgc tgttgctgct cggactatcg
     1201 attggcatcg gcaacgccca gacaacaacc acttcgcagc ctcgtgagca cgtttatctg
     1261 cttcgcggct tcgcgaacgt gttctcgttg ggcatggacc agattgccgc caagctgcag
     1321 cagcagggca ttcacgccac cgtcgacaat tatttggcgt ggccaagctt ggccgaacaa
     1381 gccgcggctg agtacaagag cggacggacg cgggcgatta tcttggtcgg gcactcgtca
     1441 ggtgcgacag cagtcaccga aatggccgca cgcctaagcc aactcggcgt gccggtcaaa
     1501 ctggccatag ggctagatcc gacgtcccgc atgaccacga caggacacgt cgatcggtac
     1561 atcaattact acatcgccaa tggattcggt gatccggttg ataagggcac agaattcaag
     1621 ggtgtgctgc aaaatgtcga tttggagcat atgtcgaacg tcagccattt caatattgat
     1681 aagaacaatg tgctgcaggg catggtgatt aaagacatcc tcgccgccgc gtcggccgcc
     1741 ccgacgcagg ccaggagcac ttgcaactta catggcggtg gtaaaggctg tggctctccg
     1801 aagcccggtg cgctcaccga tggcacagta gggagtgtgg gcagataact tggcgcctgc
     1861 aaaaaccttg cccactcatc gaaaaatcag cggtgcggta tgaacggaac gagcatcggg
     1921 acgcggcgcc ggtaggactc gtaggtttct ggagcaagct cagccgatag aaagcgctcc
     1981 tcggcacgcg ctttcaccca caggccaagg gctatgagca gagcgcccaa gagcgctacc
     2041 agtgttgcct caatggctgc ggttgctagc agcgcgatga tgaggcccgt gtaaatcgga
     2101 tgacggacaa acgcataagg gccggtctca atcaaccgat gtttttcctt gcgcgtaatc
     2161 gcgcttgacc aaaggccgcc aagatggatt cgcgcccacc aggttagcgc gagccccatc
     2221 agcatcacgc cgacgaatcc ataggcaccg taatagccga cctgccatgt cggcctctcg
     2281 cccaatacct gcgctgtcca gggcgcaatg aggatagctc cggcaaaaat gacgatacgg
     2341 tagatccacg tttcacgcgt tacggcgcgc ttttccgtgc ggcctgacca caatgacgcc
     2401 gctacccaac tgaccaccca tccgatccag atgacttgga aggtttcgct tgtctgaacg
     2461 atcacgaccc tgatgcttta cactagaagc cgggcaccat catccaagga ctaactctta
     2521 tcaggcaacc cgctgtaagc ccgtacgtct attatgtcgc ggttggtcga ttcttgcgac
     2581 ttgcttagaa tagattgtag cgcctcttcc aaggcttcac caattggacg cggtgcatag
     2641 ccgagttccc
//
LOCUS       DATILV010000520        12307 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1912959, whole genome shotgun sequence.
ACCESSION   DATILV010000520 DATILV010000000
VERSION     DATILV010000520.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 12307)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12307)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12307
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1912959"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1291
                     /locus_tag="VLJ17_11730"
     CDS             <1..1291
                     /locus_tag="VLJ17_11730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012042061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV23685.1"
                     /translation="SSAAVTPPPAPQVRTAPSAPVGPSVAPLPRTALAPVRPAPAVAP
                     DAPLVSGNVNIPARGVSDDEIRFGIAAPFSGATKELGHHMKLGIETAFNEANANGGVH
                     GRQLRLISADDGYEPTRTVEAMKQLYETDQVFGAIGNVGTPTAAVALPFALERKMLFY
                     GAFTGANLLRREPPDRYVFNYRASYTEETDAVVRYLVKLRRLRPDQIAVFAQQDAYGD
                     AGFAGVAKAIRALRGGDEGNILRLNYKRNTVDVDDAVNRLRQSKTPIKAVVMVATYRA
                     AAKFIEKTRDAYPAMIYTNVSFVGSTALAEELMLLGSRFANGVIVTQVVPAVEGYSSL
                     ILQYKAALAAYAPGQAPDYVSLEGYLAAKVLVEALKRAGPQIDTEKVVDALESLRDFD
                     IGLGTPLNFSRTEHQALHRVWGAQLDANGRYQPIELQ"
     gene            1490..1894
                     /locus_tag="VLJ17_11735"
     CDS             1490..1894
                     /locus_tag="VLJ17_11735"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSV23686.1"
                     /translation="MHKLIFPAIVVTVGMAGAVAWSQAPAPNPNVKIYYTTPLENDTS
                     RFVRLQSVTIPAGNGNNFHRHPGDQWSAVQEGEVTLTIKGEAPRTLKVGDSAYIPRGT
                     VHRNQNLTDKPARSIELNIMDKDKPLLEPVAD"
     gene            2247..2657
                     /locus_tag="VLJ17_11740"
     CDS             2247..2657
                     /locus_tag="VLJ17_11740"
                     /inference="COORDINATES: protein motif:HMM:NF012417.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSV23687.1"
                     /translation="MNKTIITAVIAIAGIATPAWTQEPAPQGPRFQPKPYFEMPLEKD
                     ATRQVRLQSVIIPAGAANQFHRHPGDQWWAVQEGEVTYTVKGQPPRVLKPGDFVYVPR
                     GTIHRNQNVSANPARAIELNITDKDKPQTEQVAD"
     gene            complement(2830..3699)
                     /locus_tag="VLJ17_11745"
     CDS             complement(2830..3699)
                     /locus_tag="VLJ17_11745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23688.1"
                     /translation="MGYRSLIGGAALAATLLATPSAQAFDESKYPDLKGQWRRTNTGN
                     PLRIGLPWDESKPVGLGQQAPLTPEYQAIYEANLAEQARGGQGTDPTFTCLSPGMPRV
                     MIAYAPMEVVVTPETTYILIEHIHDNRRIHTDGRTFPNNMDEDPQFSGYSIGKWLDED
                     GDGRYDVLEVETRGMKGPRVFDASGIPLHSDNMTVVKERIYLDKANPNLLHDDITTID
                     NALTRPWQVKKTYRRVVSDKPTWWREDVCAEGNAHVGIGKENYFLSADGLLMPAKKDQ
                     PPPDLRYFKPTRK"
     gene            3905..4786
                     /locus_tag="VLJ17_11750"
     CDS             3905..4786
                     /locus_tag="VLJ17_11750"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV23689.1"
                     /translation="MHSICPWWSGLVAMAALALRCLSFPAPGYAAETPPVGQYVELPG
                     VKLWFTDTGGDGTPIVLLHANTGTSESWQPQAMAFAQKGYRVIAFDRRGWGKSLADPA
                     SGPQPGSVAGDLDALADHLKLDKFHLVGVAGGGFVSLDYAAWRHERLRSLVVAASTGQ
                     FAEQEMQEFTARIEIPELRKQAAVYREVGPSYRGANPDGTKRWIEIDQHSRQPGAIAQ
                     PLRTPNTFAKLAAVTMPVLVVAADADLLAPPALMRTWAAHLKNYEWATVADSGHAIAW
                     EHPDIFNEKVLAFVKRH"
     gene            complement(4802..5575)
                     /locus_tag="VLJ17_11755"
     CDS             complement(4802..5575)
                     /locus_tag="VLJ17_11755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23690.1"
                     /translation="MSSDREKLILLPERVVETVEKLLARILERFGNCGLSRVCTQLCV
                     IAREDTQRAARIARSYIWLRTLVFVMLVAGIAVLGWVLTIIDFTKTAADSVYSVLQGI
                     EAAANLTLLTGATMLFLLKLEERLKRRRALSALHELRSIVHVIDMHQLTKDPSKFIVG
                     ANTPSSPPLLLNKFQMTRYLDYCSEMVSLTSKVAVLFGQSLEDQVVAEVVSDIERVAS
                     GLSQKIWQKIIILQELRTTTDAAANAPSDGDSAAIPQTD"
     gene            5613..5768
                     /locus_tag="VLJ17_11760"
     CDS             5613..5768
                     /locus_tag="VLJ17_11760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23691.1"
                     /translation="MNGPPRFFSAEDNHHVLIDGQDYFLTGNNMLMPSKKDQQPADLR
                     HFGSSRR"
     gene            complement(5804..6304)
                     /locus_tag="VLJ17_11765"
     CDS             complement(5804..6304)
                     /locus_tag="VLJ17_11765"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HSV23692.1"
                     /translation="MTRTAMFATSLAAAILAFSATASPQTAPAFEKKNYNYSEWAKGR
                     FSEAVTVSFSGPAKMIFLAGVGAEDENGKPGDIRHKDDFVAQCRYAYDKIRRALEKNG
                     AGLGDVVKIVSYVTDMRFQADYGKCRSEIFGTTPPPAHTLLNIVQLAWPGMMVEVDVT
                     AMVPGK"
     gene            6365..7606
                     /locus_tag="VLJ17_11770"
     CDS             6365..7606
                     /locus_tag="VLJ17_11770"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008142234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HSV23693.1"
                     /translation="MHYDDNLTAERASFVTHLECAYTGERHAADEVHNLSRAGKPLLV
                     RYDLEGVAKVLSKEALAQRSPDLWRYRELLPVRRVQDIVSLGETATPIITLPRLAAKL
                     GGVELLVKDEGRLPTGSFKARGLVMAVSMAKAFGIKHMAMPTNGNAGAALAAYATRTG
                     IRTTIFCPQDTPEVNVSEIELQGATVYRVNGLIDDCGKIVGAGKEKVGWFDVSTLKEP
                     YRIEGKKTMGLELAEQLGWELPDAIFYPTGGGTGLIGMWKAFAELETIGFIGAKRPRM
                     IAVQAEGCAPMVRAFEAGVEHAVRFENAHTIASGIRVPQAIGDFLILRAVRESRGFAI
                     AVSDDAITRAVDEVAREEGFLMCPEGGATYAAYKQSLADGRVGRHERAVLFNCASGLK
                     YPLPPVHRTLDINKEIDYAKL"
     gene            7736..8776
                     /locus_tag="VLJ17_11775"
     CDS             7736..8776
                     /locus_tag="VLJ17_11775"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HSV23694.1"
                     /translation="MTPLAVCRLSWFALAIAGVSLPAAALDLDDLPVGTVQNFGPNLQ
                     TAAAGVCRQPEGLAIDPNGNLYAASNSDTATAFGYVCVINKHGSLVDIISVAAAPGAA
                     AVGLLGELWEDGSLYVLDQADNIPPHGRILKIDPRTHQVKTVADGFAFPNGMAEDRRG
                     NIYFTDSFLGTIFKLSKDDAKVTPWFKDPTLLSQNPDQPVGANDLAFDANEHFLYVDN
                     AGNRQVLRIPVGENGHPGKIQLFADGATIDNELHLNGPVALFFADGMQFDVEGNLYVM
                     ANITNEVEVFSPHGKLIHRYSGTGNNALDFNASAVFKGRLLFMTNMSATDGGVNSKLS
                     VLVTPFRGLRLQ"
     gene            complement(8813..9820)
                     /locus_tag="VLJ17_11780"
     CDS             complement(8813..9820)
                     /locus_tag="VLJ17_11780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV23695.1"
                     /translation="MASYPLIDIYCHIYPEKFFEEMTKLSPQTQNLGKRLRTITKLFD
                     LDERFREMDQFGHYRQIISLPNPPIEDIASGEAGLRLARIGNDAMAELCARHSDRFAG
                     FVAAVSLTDIEGSGAEASRAVTQLGACGIQVFTPLAGRPLDEPAFAPVFATMAGFDLP
                     IWLHPARTAAMTDYAAETRSRYEMWWCFGWPYDTSVAMTRLVFAGLFDRHPGIKIITH
                     HCGGMIPYFDGRVGPGLDVLGARTTGEDYSKVLPSLKRPHLDYLKEFYGDTAMFGGKY
                     GIPCGLDFFGADHIVFATDTPLGPIAPTIAVIDGLDIDDEARRKIYVGNAERLVKRKL
                     S"
     gene            9892..10695
                     /locus_tag="VLJ17_11785"
     CDS             9892..10695
                     /locus_tag="VLJ17_11785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008833982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HSV23696.1"
                     /translation="MLPCLNGETRLHLIIGDPVGQTKSPSGLTGEFVARGANAICIPV
                     HVAAADFDVFMAAAKRGQNIDGIVITIPHKFAALRHCDEASDRARFLGAANVLRRVAP
                     DRWHGDMTDGAAMVAAVRRAGCEPGGRRALVIGAGGAGSAVALALIEAGVATLAVVDM
                     DAKRCQSLVKRLAAKAPAVAQAGTIDPAGFGLVVNATPAGMRLDDPLPVDAARLEPSA
                     CVADLITQPSITPLLEAARRRGCKVVTGEDMFAVQAGDMADILLTPPAF"
     gene            10810..11436
                     /locus_tag="VLJ17_11790"
     CDS             10810..11436
                     /locus_tag="VLJ17_11790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006926032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS607 family transposase"
                     /protein_id="HSV23697.1"
                     /translation="MERIVGISEAADVLGVSISTLRRWEAAGKLVAEHTPGGHRRYDL
                     AKLRPELFRAAEAASRKTIAYARVSSHDQKDDLERQKQVLERYCARQGWMFEVVADFG
                     SGMNYHKKGLKKLLGGILADEVGRLVIAHKDRLLRIGAELVFAICEAKRVEVVILNQG
                     EDTTFEEDLAKDVLEIITVFSARLYGSRSHKNQKLLDDLKRAVEESPQ"
     gene            11627..>12307
                     /locus_tag="VLJ17_11795"
     CDS             11627..>12307
                     /locus_tag="VLJ17_11795"
                     /inference="COORDINATES: protein motif:HMM:NF024376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhnD/SsuA/transferrin family substrate-binding
                     protein"
                     /protein_id="HSV23698.1"
                     /translation="MKRACFASLALALVASAFAASAARTQDNLKQDTLKVAIGQINNW
                     ENQAPTLGQEVGIFKKHGLVLETFGTAGAGETLQPIISGSADIGIGVGVAGVMRAFST
                     GAPVRILAPAFTGTADLYWYVRADSPLKTFADVTARNTVAYSTNGSSSHNIVLAFVEE
                     LGLKAKPTPTGSPPATLTAVMSGQIDIGWAAPPIAMQEIRDGKVRLIARGSQVPSLRG
                     QTVRATIVN"
BASE COUNT         2472 a         3701 c         3767 g         2367 t
ORIGIN      
        1 gtcgtccgct gccgtgacgc cccctccggc accgcaggtt cgtaccgctc cgtcggcgcc
       61 ggtaggccct agcgtcgcgc cactgcctcg aacggctctt gcgcctgtgc ggccggcccc
      121 ggcagtcgct cccgacgcac cgctggtttc cgggaacgtg aatattccgg cacggggggt
      181 ttccgacgac gaaataagat ttgggattgc ggccccgttc agcggggcga ccaaagaact
      241 tggccaccat atgaagttag ggattgagac cgcgttcaac gaggccaacg ccaatggcgg
      301 agtacatggc cggcagctcc gactgatatc ggcggacgac ggctacgaac ccactcgcac
      361 ggtcgaggcg atgaagcagt tatacgagac ggatcaggtt tttggcgcca tcggcaatgt
      421 cgggacgccg accgcagctg tcgcactgcc atttgcgctt gagcgcaaga tgctgttcta
      481 cggtgcgttt accggcgcaa acctgctcag gcgcgagcct ccggatcgct acgttttcaa
      541 ttaccgggcg agctacaccg aggagacgga cgctgtcgtg cgatacttgg tgaagctgcg
      601 gcgcttgcgg ccggatcaga tcgccgtctt cgcccagcag gacgcctatg gcgacgccgg
      661 gttcgccggc gtcgccaagg ccatacgcgc actacgcggc ggtgatgagg gcaacattct
      721 gcgcctcaat tataaacgca acaccgtgga tgtcgacgac gcggtcaatc gcctacgtca
      781 aagcaagact ccgatcaaag ccgtcgtcat ggtggcaacg taccgggccg cggcgaagtt
      841 cattgagaag acgcgcgacg catatcccgc aatgatctac accaatgtct cattcgtggg
      901 cagcaccgca ttggccgagg aactgatgtt gctggggtcg cgctttgcaa acggcgttat
      961 cgttacgcag gtggtgccgg cagtcgaggg ctactcgtcg ctgatccttc agtacaaggc
     1021 cgcactcgct gcctatgccc ccgggcaagc gccggactat gtatctctcg aaggctattt
     1081 ggccgcaaaa gttttggtgg aggcgttgaa acgggctggg ccgcagatcg acaccgagaa
     1141 ggtggtggat gcgctcgaaa gcttgcgtga cttcgacatc ggacttggta cgcctctaaa
     1201 tttcagccga accgagcatc aagcgcttca cagggtgtgg ggtgctcagc tggatgcgaa
     1261 cggacgttat caacccatcg aactacaata gcggcgcttc ggctgtcgag gtgcgcccag
     1321 cgcgatcggc ctatcttgaa aatatgctgc gccgtctgcc actttcacga cggcgcgact
     1381 tgctggccgc gtgacaccag caagcgcaag ctgcaacggg tctttgcgcg ccttgcagaa
     1441 atgcactaac attgcgcgaa ttgataaacc aaatctaggg ggggttctta tgcacaaact
     1501 gatttttccg gccatcgtcg taaccgtcgg catggcgggt gccgtcgcat ggtcgcaagc
     1561 tcccgcacct aatccgaatg tgaagattta ttacacgaca ccgctcgaaa acgacacctc
     1621 gcgtttcgtg cggctgcagt ccgtcaccat accggccggg aacggcaaca atttccaccg
     1681 tcatccgggc gatcaatggt ccgcggttca ggagggagag gtcaccctca ccatcaaggg
     1741 cgaggcgccg cgtacgctca aggtcggcga tagcgcctac atcccgcgcg gcaccgttca
     1801 tcgcaaccag aacctcaccg acaagcccgc gcgctccatc gagctcaata tcatggacaa
     1861 ggacaagccg ctgcttgaac cggtggcaga ttagcatcta caaagttgga tgggtcgagc
     1921 ttttgcgaga tccatcaggt gataagccaa aagcaccttg ggcacacccc ggcgaagcac
     1981 gccatcgtcg acgacgtatt gtgcgaactg accccgaacg gtggatgcgc aggggagccg
     2041 ttccagtgtc gggatttccc tcgacttcac actgccgggc gacatgcctc caacgcacgg
     2101 accccggggg gtgagaggtt cgataagttg ggcgctcatc gccaagacgc agcttgcgga
     2161 actcgactat aatgcggtgt ttcgaattcc cgtgcgcaac cgcggcgacg cgcgcagcca
     2221 aaaacgtcag ccaagggagg agtccaatga acaagacaat cattactgcc gtcattgcga
     2281 tagccggcat tgcgacccca gcgtggacac aggagccggc gccacagggg ccgagattcc
     2341 agccgaagcc ttattttgag atgccgctcg agaaggatgc aacccgccag gtgcggctgc
     2401 agtcggtcat cattccggcg ggcgccgcca accagttcca ccgccatccg ggcgaccaat
     2461 ggtgggcggt gcaggagggc gaagtcactt acaccgtaaa gggacagccg ccgcgcgtgc
     2521 tcaagcccgg cgacttcgtc tacgttcccc gcggcaccat tcaccgcaac cagaacgtct
     2581 ccgccaatcc agcgcgcgcg atcgaactca acatcaccga caaggacaag ccgcagacgg
     2641 agcaagtggc ggattaagcg cgtaatgaaa gccctcattc cggggcgcgc gctttgcgcg
     2701 aacctggaat ccaaaacctc aggcgggcat gatgcgcaga gcatcggggg attgcgggct
     2761 caccgctttg cggtgcgccc cgcgataacc cagtaacatc aacgcctacg cggctgcgcg
     2821 cgcgtcccgt cactttcgcg tcggtttgaa atagcgcaaa tcgggcggcg gctgatcctt
     2881 tttggccggc atcaggaggc cgtcggcgct caggaaatag ttctccttgc cgatgccgac
     2941 atgggcattg ccttccgcac aaacgtcctc gcgccaccag gtcggcttgt cgctcaccac
     3001 gcggcgatag gtcttcttca cctgccatgg acgcgtcagc gcattgtcga tcgtggtgat
     3061 gtcgtcgtgg agcaggttgg gattggcctt gtcgaggtag atgcgttctt tgaccacggt
     3121 catgttgtcg ctgtgaagcg gaatgccgct ggcatcgaag acgcggggcc ctttcatgcc
     3181 gcgtgtctcg acctcgagca catcgtaccg gccgtcgccg tcctcatcga gccacttgcc
     3241 gatcgaatag ccggagaact gtggatcctc gtccatattg ttcggaaatg tgcggccgtc
     3301 ggtatggatg cggcggttgt cgtggatgtg ctcgatcaaa atgtacgtgg tttccggtgt
     3361 aacgacgact tccatcggcg cataggcaat catgacccgc ggcataccag gcgacaggca
     3421 cgtgaaggtc gggtcggtgc cttggccgcc acgggcctgc tccgcaagat tagcctcgta
     3481 aatggcttga tactcgggcg tcagcggagc ctgctgcccg agaccgacag gcttgctctc
     3541 gtcccatggc agcccgatac gcagcggatt gcccgtattg gttcgccgcc actggccctt
     3601 caggtcggga tatttggatt cgtcgaacgc ttgtgcgctt ggcgtagcca acaacgtcgc
     3661 cgcgagcgcg gccccaccga tgaggcttcg gtaacccata cgttcctccc tgggatttgt
     3721 tgtctgcaaa gctacacgac atgcggttgc ggcgaaagag cgggtcagcg gcccttcgag
     3781 cctcttagac acagcgagaa aaggacatcg ttcgacgcga tgggcgacgt gtcggtatca
     3841 gtactgtgta ggatgggcta acgttcaatc cagcctacat actgcaccgg atacggagcg
     3901 aaatatgcac agcatttgcc cgtggtggtc gggacttgtg gcgatggccg ccttggcgct
     3961 cagatgtttg agttttccgg cgccgggtta cgccgccgaa acgccccccg tcggccaata
     4021 cgtggagctt ccgggcgtca aactatggtt caccgacacg ggaggtgacg gcaccccgat
     4081 cgtattgctg cacgccaaca ccggcaccag cgagagctgg cagccgcagg cgatggcctt
     4141 tgcgcagaaa ggctatcgcg tcatcgcttt tgatcgccgc ggctggggca agagcttggc
     4201 cgatccggcg agcggcccgc aacccggcag cgtggccggt gatctcgatg cgctcgcgga
     4261 tcacctcaag ctcgacaagt ttcatctggt gggagttgcc ggcggcggct tcgtttcgct
     4321 tgattacgct gcgtggcgcc atgagcgtct gcgcagcctc gtcgtggcgg cgagcaccgg
     4381 acagtttgct gaacaggaaa tgcaggagtt cactgcgcgg atcgaaattc ccgagctacg
     4441 caagcaggcc gcggtgtacc gggaggtcgg cccgtcatac cggggcgcaa atccggacgg
     4501 cacgaaacgt tggattgaaa tcgatcagca ctccaggcag cctggagcga tcgctcagcc
     4561 gctgcgcacg cccaatacct tcgcgaaact cgccgccgtc accatgccgg tgctggtcgt
     4621 ggcggccgac gccgaccttc ttgcaccacc ggcgctgatg cgcacctggg cggcccattt
     4681 gaagaactac gaatgggcca cggttgcgga ttccggtcac gctatcgcct gggagcatcc
     4741 cgatatcttc aacgagaagg tactggcgtt cgtgaaacga cattgaggtc gtctcgattg
     4801 cctaatccgt ctgaggaatg gctgcgctat cgccgtccga aggagcgttc gctgcggcat
     4861 ccgtggttgt cctgagttcc tgcaggatga tgatcttctg ccatatcttc tgcgaaagcc
     4921 cggaggcgac gcgctcgata tcgctgacca cctcggcgac cacctgatcc tcaagactct
     4981 gcccgaacag taccgccact ttcgaggtca gcgacaccat ttctgagcaa tagtcgagat
     5041 agcgcgtcat ctggaatttg ttgagtagaa gaggcggaga tgatggcgta ttcgcgccga
     5101 caatgaactt gcttggatct ttcgtcagct ggtgcatgtc tatcacatgg acgattgatc
     5161 ggagctcgtg caacgcgctc aaagcgcggc gacgcttgag gcgttcttcc agcttgagca
     5221 ggaagagcat tgtggctccg gtgaggagcg ttagattggc cgctgcctcg atgccctgca
     5281 gaaccgaata tacgctgtcg gccgcggtct tggtgaagtc gatgatcgtc aatacccatc
     5341 ccagcactgc aatgccagcc accagcatga cgaaaacaag cgtgcgcagc cagatgtagc
     5401 tacgtgcgat ccgcgccgcg cgttgggtat cttccctcgc gattacacag agctgggtgc
     5461 acaccctgga cagcccgcaa ttgccgaatc gttctaaaat ccgcgccaga agcttctcaa
     5521 ccgtctcgac cacccgttca ggtaacaaaa tcaacttctc acgatccgac gacataggag
     5581 gcgacctcct tttgaaatga gggcgcgtcc cgatgaacgg acccccgcgg ttttttagtg
     5641 ccgaggacaa tcatcatgtt ttgatcgacg gccaggatta tttcctgacc gggaacaata
     5701 tgttgatgcc gtccaagaag gaccagcagc ccgcagacct gcgccatttc ggatcatcgc
     5761 gccgttaatg ctggtttccg tgcttctagc agaacaaggc ccttcacttc cccggcacca
     5821 tcgcggttac atcgacctcg accatcatgc ccggccatgc cagttgcacg atgttgagga
     5881 gcgtgtgggc cggcggtggc gtcgtgccga agatttctga acggcatttg ccgtaatcgg
     5941 cctggaaacg catatcggtg acgtagctca cgatcttgac gacatctcct aacccggcgc
     6001 cgttcttctc cagtgcacgc ctgatcttgt cgtaagcgta tctgcattgg gcgacgaaat
     6061 cgtccttgtg gcgaatatcc cctggcttgc cgttctcatc ctcggcgccg acgccggcaa
     6121 ggaagatcat tttcgcgggc cccgaaaagc tcacagtaac tgcttcagag aagcggccct
     6181 tggcccattc ggaataattg tagttcttct tctcgaaggc gggcgcagtc tgtggcgaag
     6241 cggtggctga aaacgcgagg atcgcggctg cgagcgatgt ggcgaacatt gctgtccttg
     6301 tcatgggggg gctccatctg aaatacagtc cggagaatgt accgcacttc agggagtcga
     6361 ccacttgcat tacgatgaca atttgacggc cgagcgggcg agcttcgtaa cccatttgga
     6421 atgcgcctac acgggcgagc gccacgccgc cgacgaggtg cacaacctgt cgcgcgctgg
     6481 caagccgctg ctggtgcgct acgatcttga gggcgtagcc aaggtgctga gcaaagaagc
     6541 gctggcgcaa cgctcgccgg atctgtggcg ctaccgcgag ctgctgccgg tccgtcgcgt
     6601 ccaggacatc gtcagcctgg gcgaaaccgc gaccccgatc atcaccctgc cgcggctcgc
     6661 cgccaagctc ggcggcgtcg agttgctagt caaggacgaa ggacggctac cgaccggttc
     6721 gttcaaggcg cgcggcctcg tgatggcggt gtcgatggcc aaggccttcg gcatcaagca
     6781 catggcaatg ccgaccaacg gcaacgcggg cgccgcactc gcggcctacg ccacccgcac
     6841 gggtatcagg accacgatct tctgtccgca ggacacgccg gaggtgaacg tcagcgaaat
     6901 cgagctgcag ggcgcgacgg tctatcgtgt caacggcctg atcgatgact gcggcaagat
     6961 cgtcggtgcc ggaaaggaaa aggttggctg gttcgacgtt tcgaccctca aggagcccta
     7021 ccgcatcgaa ggcaagaaga ccatgggatt ggagttggcc gaacagctgg ggtgggagct
     7081 gccagacgcc atcttctatc cgaccggcgg cggcaccggc ctgatcggaa tgtggaaggc
     7141 cttcgcagaa ctggaaacga tcgggttcat cggcgccaag cgcccccgca tgatcgccgt
     7201 gcaggcggag ggctgcgccc cgatggtgcg ggcgttcgag gcgggcgtgg agcacgcggt
     7261 gcgcttcgag aatgcgcata ctattgcgag cgggatccgg gttccgcagg caatcggcga
     7321 ttttctgatc ctgcgcgccg tgcgtgaaag ccgcggcttc gctatcgcgg tgagcgacga
     7381 cgccatcaca agggctgtag acgaagttgc acgagaggaa ggcttcctga tgtgcccgga
     7441 aggaggcgct acgtacgcgg cgtacaagca aagcctcgcc gacggtcgcg ttggccgtca
     7501 cgagcgcgcc gtgctcttca attgcgcgag cggtctcaaa tatccactgc cgccggtgca
     7561 ccggacgctc gatataaaca aggagatcga ttacgcgaag ctgtgaaggg gcggcccacc
     7621 gcgatgctac tgtagattgc tctcatcgcc gccctaacgg ctggattctg cctctcattt
     7681 cgcgcacact cccacctgaa gcaaagagaa attcgggtgc gggaggaaaa cactcatgac
     7741 gccgcttgca gtatgccggc tatcgtggtt cgcattggcc atcgcaggcg tttcactgcc
     7801 cgccgccgcc cttgatctcg atgacctgcc ggttggcacg gtgcaaaact tcggccccaa
     7861 cttgcagacg gcggccgcag gcgtttgccg gcagcccgaa ggcctcgcca tcgatcccaa
     7921 tggaaacctg tacgccgcgt cgaattccga caccgcaacg gcgttcggct atgtctgcgt
     7981 catcaacaaa cacggcagcc tggtcgacat catttcggtt gcggccgcgc cgggagccgc
     8041 cgcggtcggt ttattaggcg agttgtggga agatggatcg ctttacgttc tcgaccaggc
     8101 cgacaacatc ccgccgcacg gcagaatact caagatcgat ccgcgcaccc atcaagttaa
     8161 gaccgtcgcc gacggcttcg catttcccaa cggcatggcc gaagatcgcc gcggcaacat
     8221 ctattttacg gactccttcc tcggtacgat ttttaagctc tccaaggacg acgcgaaggt
     8281 caccccctgg ttcaaagatc cgacgctgct ttcgcaaaac cccgatcagc cggttggagc
     8341 caatgatctc gccttcgatg cgaacgagca ctttctgtac gtggacaatg ccggaaaccg
     8401 gcaggtcctg cgcattccgg tcggcgagaa cggccatccc ggcaaaattc aactctttgc
     8461 cgatggcgcg acgatcgaca acgagttgca tcttaatggg cccgtggcgc tgtttttcgc
     8521 cgacggcatg cagttcgacg tcgagggcaa tctgtatgta atggcgaata tcacaaacga
     8581 agtagaggta ttctcgccgc acggaaagtt gatccaccgc tacagtggaa ccggcaacaa
     8641 tgcgctcgac ttcaacgcca gcgccgtctt caaggggaga ctcttgttca tgacgaacat
     8701 gtcggcgacc gatggcggcg tcaattcgaa actatcggtg ctggtgacgc cgtttcgagg
     8761 gcttcgcctg cagtgataaa attctctgtc tctgactgga gaggcttgga aatcaactca
     8821 atttccgctt caccagccgt tcagcattcc caacgtaaat cttgcgccgc gcttcgtcgt
     8881 cgatgtcgag gccgtcaatg accgcgatgg tgggcgcgat cggcccgagc ggcgtgtcgg
     8941 tggcgaatac aatgtggtcg gccccgaaga aatcgaggcc acacgggatg ccgtatttgc
     9001 cgccgaacat ggcggtgtcg ccgtagaact ctttgagata gtcgaggtgc ggccgcttga
     9061 gcgacggcag caccttggaa taatcctcgc cagtggtgcg ggcgcccagc acgtcgagac
     9121 ctgggccgac gcggccgtca aaatacggga tcatgccgcc gcagtggtgg gtgatgatct
     9181 tgatgcccgg atggcggtcg aacagacctg cgaagacgag ccgggtcatg gccaccgagg
     9241 tgtcgtaggg ccagccgaag caccaccaca tttcgtagcg ggatctggtt tcggccgcat
     9301 aatccgtcat agcggcggtg cgggccggat gcagccagat cggcaggtcg aagcccgcca
     9361 tggtggcaaa caccggcgcg aaggccggct cgtcgagtgg ccgaccggcg agtggggtga
     9421 acacctgtat gccgcatgct cctagttgcg tgacggcgcg ggatgcctcg gcgccagagc
     9481 cttcgatgtc agtgagcgac accgccgcca caaagccggc aaaccggtcc gaatgccgcg
     9541 cgcaaagttc tgccatggcg tcgttgccga tgcgggcgag gcgcaggccg gcttcacccg
     9601 atgcgatgtc ctcgatcggc gggttgggca gcgaaatgat ctgccggtaa tggccgaact
     9661 gatccatctc gcggaaccgc tcgtcgaggt cgaacaactt agtgatcgta cgcaaccgtt
     9721 tgccgagatt ttgggtctgc ggcgacaact tggtcatttc ctcgaagaat ttctcggggt
     9781 agatgtggca atagatgtcg atcaatggat agctggccat cgtttcctca cccggcattg
     9841 cgcgcagcct gccccccaaa cagtagcacc actcgcacgg aacggatcaa gatgctacca
     9901 tgcctcaatg gcgagacgcg ccttcacctc attatcggtg acccggtagg ccagaccaaa
     9961 tcgccctcgg gccttaccgg tgagttcgtc gctcggggcg ccaacgcgat ctgcattccg
    10021 gtgcacgtgg cggccgcgga tttcgatgtc ttcatggcgg ctgcaaagcg cgggcaaaac
    10081 atcgacggca ttgtcatcac cattccccat aagttcgcgg cactccgtca ttgcgacgag
    10141 gcgtccgacc gcgcccgctt ccttggcgcc gccaatgtac tacgccgcgt cgccccggat
    10201 cgctggcatg gcgacatgac cgacggggcc gccatggtgg cggccgtgcg gcgcgctggc
    10261 tgcgaacccg gtggccgacg cgctctggtc atcggtgcag gtggcgccgg ctcggcggtt
    10321 gcattagccc tgatcgaggc cggggtggcg acgcttgcgg tagtggatat ggacgcgaaa
    10381 cgatgccaaa gcttggtcaa gcgccttgcc gcaaaggcgc ctgcggtggc acaggccgga
    10441 accatcgacc cggccggatt cggtctcgtt gtgaatgcga cgcccgccgg aatgcgtctg
    10501 gatgacccgt tgccggtcga tgcggcacgg ctcgagccgt ctgcgtgtgt tgccgatctc
    10561 atcactcagc cctccatcac accgcttctc gaggcagccc gccgccgcgg ctgcaaggtc
    10621 gtgaccggcg aagacatgtt cgccgttcag gcaggcgaca tggccgatat cctgctgaca
    10681 ccgccggcgt tctgatggag gacgagcgcg ccgcgcctga caactctttg gtgcgcagcg
    10741 ccgggcgcag gaaaatgggc taaaacaagt attttgcaat ctgcgcgaat ctatgcaatt
    10801 ctctgcaata tggagaggat tgttggcatc agcgaggctg cggacgtgct gggcgtgtcg
    10861 atttcgacgc tgcgccgctg ggaagcggct ggcaagctgg tggccgagca tacgccgggc
    10921 ggtcatcgcc gctacgatct cgccaagttg cgcccggaac tgtttcgcgc tgccgaagcg
    10981 gcaagtcgca agaccatagc ttatgcgcgg gtatcctcgc acgaccagaa agacgatctg
    11041 gaacggcaaa aacaggttct tgaacgctat tgcgcccggc aaggctggat gttcgaggtg
    11101 gtggctgatt ttggttccgg tatgaactac cacaagaagg gcctcaagaa gcttctaggc
    11161 ggcatactgg cagacgaagt cgggcggctg gtcattgccc ataaagatcg gctgttgcgc
    11221 attggcgctg aactcgtctt cgcgatttgc gaagcgaaga gggttgaggt tgttatcctc
    11281 aaccaaggcg aggacacgac ctttgaggag gatttggcaa aggacgtttt ggagattatc
    11341 accgtcttta gcgcccgcct gtacggctca cgatcccaca agaaccaaaa gcttctggat
    11401 gacctcaaac gcgctgttga ggaatcgccg caatgatgct ggctcataaa atcgcgtttg
    11461 atccaaccaa taagcagcac acctattttt gcgcgggcct gctgcgcggc gcggttcgcc
    11521 acaattggta acggtaagga cggcgtgcct tcaggtgcaa cgagagcagt cgtcaaaatt
    11581 gcaatgctgg ccaaaaggcc cgctaagtcg aaggaggaaa acgccgatga aacgtgcctg
    11641 tttcgcgagc cttgcgctgg ctctcgttgc gtccgcattc gcagcatcag cggcccgcac
    11701 ccaagataat ctgaagcaag atacactgaa ggttgctatc ggccagatca acaattggga
    11761 gaaccaggcg ccgaccctcg gccaggaggt cggcatcttc aaaaaacacg gcctcgtgct
    11821 ggagacgttc ggcaccgccg gagcggggga gaccttgcag ccgatcattt ctggcagcgc
    11881 cgacatcggc atcggggtgg gcgttgccgg cgtcatgcgg gccttctcta ccggagcgcc
    11941 ggtacgcatc ctggcgccgg cattcaccgg caccgcagac ctctactggt atgtgcgagc
    12001 ggattccccc ctcaagacat ttgctgacgt cacggcgcgc aacacggtgg catactcaac
    12061 caacggatcg agttcccaca acatcgtgct ggctttcgtg gaggaactag gcctcaaggc
    12121 aaagccgacg cccaccggca gtccgcccgc cactctcacg gcggtaatgt cgggtcagat
    12181 cgacatcggc tgggcggcgc cgcccatcgc catgcaagaa atcagggacg gcaaggtacg
    12241 tctcattgcc cgcggtagtc aggtcccctc gctccgtggg cagaccgtgc gggcgacgat
    12301 cgtcaat
//
LOCUS       DATILV010000521         2707 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4466168, whole genome shotgun sequence.
ACCESSION   DATILV010000521 DATILV010000000
VERSION     DATILV010000521.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2707
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4466168"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            41..1753
                     /locus_tag="VLJ17_11800"
     CDS             41..1753
                     /locus_tag="VLJ17_11800"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HSV23699.1"
                     /translation="MAIDLKKTDVVIVGLGAVGGVAALPLARAGLDVIGLEAGSWLTP
                     RDFAPDELRNNFRGWPQAAQKANMEIPTHRPNSSAPYSPRFPIHPMMNAVGGTSLHYW
                     AQSWRLNPWDFRVVSETTRRYGASRIPKGSTVEDWSFGLEELEPYYDKVEHEVGVSGQ
                     AGNINGAIDPRGNIFEGPRQRGYPMPPLRGTEFTERMAAAARRLGWQSFPGPAAVNSQ
                     TYDDRPGCQYHGFCNRGGCHVSAKNSAAVSTIPKAMETKRLQVVTQAIATSVTLDDKS
                     GRVNGVVYVKGGLEYFQPADVVLLASYTYENVRLLLLSKSRAFQNGLANNAGQVGRHY
                     MTHHTGNPVTALFPFALNNWYGLPAQGVAVDNWADDNFDHSGLDFIGGGNLWVYSDRR
                     PIGAASMSTYGKAPTWGSAWKSFIKQNADRFNVAYLQKTTLPYEDNYLDLDPVAKDPM
                     GFPVIRITADHKDNEKRLGTFIQDKMAQWFMEAGAIAVEKGPTGTMGPSTHAYGGTRM
                     GDNRATNVVDRWGFAHEVPNLGILGASVMGTSGAHNPTLTAQALAWRTAEHLTGNWKA
                     IAGG"
     gene            complement(1865..>2707)
                     /locus_tag="VLJ17_11805"
     CDS             complement(1865..>2707)
                     /locus_tag="VLJ17_11805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018261090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1501 domain-containing protein"
                     /protein_id="HSV23700.1"
                     /translation="FETQDTIELGQPVHGTRNYNSGFMARLATVLTRAKPIAYTEQLP
                     LVFRGGHAIPNIGIASVGKPRVDDRQAKLIESMYAKDALGGAVSEGFKVRDDVYKTVS
                     QEMVVADRGAVSAKGFELSARRIGRLMRDQYNLGFVDVGGWDTHVGQGGATGYLAGRL
                     AELGRALAGFAEEIGPEAWNDTLVVVISEFGRTFRENGNKGTDHGHGSVYWVLGGAVK
                     GGRIAGEEVKVEQASLFQNRDYPVLTDYRALFGGLFARAYGLDQKLLQQVFPGATPKD
                     LALV"
BASE COUNT          523 a          871 c          844 g          469 t
ORIGIN      
        1 gcctacgcgg atgcaacctt caccatgaag ggaggcagcc atggccatcg accttaagaa
       61 gaccgacgtc gtcatcgtcg ggctcggggc ggtcggcggt gtcgccgcat tgccgctggc
      121 gcgggcgggt ctcgacgtga tcgggcttga ggccggctcc tggctgacgc cgcgcgattt
      181 tgcaccggac gagctgcgca acaatttccg tggttggccc caggccgccc agaaagccaa
      241 tatggagatt cccacccatc ggccgaactc atctgcaccc tattcgccgc gctttccgat
      301 tcatccgatg atgaatgcgg tcggcggcac ctcgttgcat tactgggcgc agagttggcg
      361 gctcaatccg tgggactttc gggtggtgag cgaaacgacg cggcgctacg gggcttcgcg
      421 catcccgaag ggctcgaccg tcgaggactg gtcgttcggg cttgaagagc tcgagcccta
      481 ttacgacaag gtcgagcacg aggtcggtgt gtcgggtcag gccggcaaca tcaacggcgc
      541 catcgatccg cgcggcaaca tcttcgaggg gccacgccaa cgcggctatc cgatgccacc
      601 gttgcgcggc accgaattca ccgagcgcat ggcagcggcg gcacgcaggc tcggctggca
      661 atcgttcccg ggtcctgccg cggtcaactc gcagacctat gacgaccggc ccggatgcca
      721 gtatcatggc ttctgcaacc ggggcggctg ccacgtcagc gcgaagaact ctgcggccgt
      781 gagtaccatc ccgaaggcga tggaaacgaa gcgcttgcag gtggtcacgc aggcaatcgc
      841 caccagcgtg acacttgacg acaagagcgg ccgtgtaaac ggcgtcgtct atgtcaaagg
      901 cggcctcgaa tactttcagc cggccgacgt ggtgctgctt gccagctaca cctacgagaa
      961 tgtgcgattg ctattgctgt cgaaatcgcg cgctttccaa aatgggctcg ccaacaatgc
     1021 cggccaggtc ggccgacact acatgaccca ccacaccggc aatccggtga cggcgctgtt
     1081 cccgttcgcg cttaacaact ggtacggcct gcctgcccag ggtgtcgcgg tcgacaactg
     1141 ggcggacgac aatttcgacc attccggcct cgacttcatc ggcggcggca atctgtgggt
     1201 ctattccgac cggcgcccga tcggggccgc cagcatgtcg acctatggaa aggcaccgac
     1261 ctggggttcg gcctggaaat ccttcatcaa gcagaacgcc gaccgcttca atgtcgccta
     1321 tctgcaaaaa acgaccttgc cgtatgagga caactatctc gatctcgatc cggtcgcgaa
     1381 ggacccgatg ggtttcccgg tgatccggat cacggccgat cacaaggaca acgaaaaacg
     1441 gctgggtacc ttcatccagg acaagatggc gcaatggttc atggaggcgg gcgcgatcgc
     1501 ggtggagaag ggaccaaccg gcaccatggg cccctccacg cacgcgtatg gcggcacccg
     1561 catgggcgac aaccgcgcca ccaacgtggt cgaccgctgg ggttttgccc acgaagtgcc
     1621 gaacctcgga atcttgggtg cgtcggtaat ggggacgagc ggagcccata atccgaccct
     1681 cacggcccag gcgctggcgt ggcggacggc ggagcacctc acgggaaact ggaaggcgat
     1741 tgcgggggga tgaacgttaa ctcggatgga gcgaagcggc atccgggtct tcccaaaacg
     1801 gcagcgccgc cctggactac gcgatcgaag acggtcgctc cgtgcgagct gcgggcgatg
     1861 tgcattacac cagcgcaagg tccttcggcg tggcgcccgg aaacacctgt tgcaagagct
     1921 tctgatcgag cccgtaggcg cgggcgaaca agcctccgaa caacgcccga tagtccgtca
     1981 gcaccggata atcacggttc tggaacagcg aagcttgctc gaccttgacc tcttcgccgg
     2041 cgatgcgccc gcctttgacg gcaccgccga gcacccaata gacgctgccg tggccgtggt
     2101 cggtgccctt gttgccgttc tcccgaaacg tgcggccgaa ttcggaaatc accaccacga
     2161 gtgtatcgtt ccacgcctct gggccgatct cctcagcgaa gcccgcgagc gcacggccga
     2221 gttcagcgag ccgacccgcc agatagccgg tcgcgccgcc ctggcccaca tgggtgtccc
     2281 agccgccgac gtcgacgaaa ccgagattgt attggtcgcg catcaagcgc ccgatgcgtc
     2341 gcgccgataa ctcgaacccc ttggccgaga cggcgccgcg gtcggctacc accatttcct
     2401 gcgacacggt cttgtagacg tcgtcgcgta ccttgaagcc ctcagacacc gcgccaccaa
     2461 gcgcgtcctt ggcatacatg ctctcgataa gcttggcttg gcgatcatcg acgcgcggct
     2521 tgcctaccga ggcaatgccg atattcggga tcgcatggcc cccgcgaaac acaagtggca
     2581 gctgctccgt ataggcgatt ggcttggcgc gtgtcagcac ggttgcaagc cgcgccatga
     2641 agccagaatt atagttgcgc gtgccgtgca ccggctggcc gagctcgatg gtgtcctgcg
     2701 tctcgaa
//
LOCUS       DATILV010000522        13706 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4977738, whole genome shotgun sequence.
ACCESSION   DATILV010000522 DATILV010000000
VERSION     DATILV010000522.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 13706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13706
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4977738"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            148..609
                     /locus_tag="VLJ17_11810"
     CDS             148..609
                     /locus_tag="VLJ17_11810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003535416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HSV23701.1"
                     /translation="MTRQYLEDFTVGQIFGSGRLRVDKEAIIAFAEQFDPQSYHLDEE
                     AARKSVFSGLAASGWHTAALTMRLLVESEFKPAGGILGVGFDELSWPRPVRPGDELHT
                     KSEVLDVRPSKSRPDRGVIRVRTTTFNQNGEAVQIYTGNLLVPRRPTGAYL"
     gene            complement(944..1876)
                     /locus_tag="VLJ17_11815"
     CDS             complement(944..1876)
                     /locus_tag="VLJ17_11815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23702.1"
                     /translation="MRTIILESTAPFQGLPELVAYDEGVFAREGLAVEWMERDHAPAI
                     KTAVNVTTPRGLDPFLSHGSLLEQGKADMYNACEWGNYCRVQDTSRGSRQLGRRAIVT
                     FAAIVVRPDSLIYTPQQLANRTIGVPFYFGSHYLALHLLEGFLPRHLIRLCSAPNGSR
                     YRLASLMEREIEATTLTEPYISLAEKKGCRIICSAFYHGTEVASDRVDGEIYAAFNRA
                     VREAVRRINADKHAYLHYFIDYHRPKDPEIGTLRVDDLRENRIVVCDPAPIPADELQR
                     TFDWLKSWDMLETTNSPRKLVDTQIQTLAHIVVQ"
     gene            2131..3555
                     /locus_tag="VLJ17_11820"
     CDS             2131..3555
                     /locus_tag="VLJ17_11820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23703.1"
                     /translation="MRKNLGFVLALLLAMASNGGTMAQTQTLEQKIWTLLDDSEAAYV
                     SLGEAEFRALGAGFDLPDGGRSIARLAEQAPGGAFDPRDVAKLAPQQLGYKASWIVER
                     FRRYNLEWDITGLRLESLDPDAKSYPWFIVMNGGAANFYEFFVDLKNRPGWTQYLAQK
                     LNVMIVTIPGNFKYGGWEQPVADAKRQPAYLLDRDISMDEYEVRNAIFTNSLIMQGLK
                     ALVTKHTSGDILLIGHSTSGEQSMLAYEDPELSARLKGRYLGWGSGGPARLELLRTVR
                     GKDIPDRAGASPPSGRTPLYTLERRDPSSYSRGYSGFLNPLYEPGMSHLQIAERWLAT
                     EARRRPNFKQQLQNLEHGADLGQKGWVENEIESLLKRTGNPWRIAVEDVAKDLFVTSF
                     TRMDGFRRMVWTTAHFDRNHWNPEQPMKSIEVFIANEYRAKNPDAQIRLINWDPPMTH
                     YGHLELPKQLAAAHVSVVRWLVRP"
     gene            complement(3770..4945)
                     /locus_tag="VLJ17_11825"
     CDS             complement(3770..4945)
                     /locus_tag="VLJ17_11825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_function: GO:0019213 - deacetylase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase/deacetylase family
                     metallohydrolase"
                     /protein_id="HSV23704.1"
                     /translation="MAIELILRGGRIIDPSQHLDTVADIGFGDGKIAGIGAHLAAGSG
                     TEVLDVSGHLVTPGLIDLHTHVYWGGTSLGIDAEEFCRTSGVTTCVDTGSTGPGNFAG
                     FRKHVIEPSAVRILAYLHISFAGIFAFSKTVMVGESEELRLMAPSEAVEVAEANRDVI
                     VGIKVRVGRGASGTSGVAPLDIALQAANEAGMPLMCHIDFPPPSYEEVLERLRPGDVL
                     THAFRPFPNAPIDHQGKVKDAVWRARQRGVKFDIGHGKGSFAFKTARGMLANGFFPDT
                     ISSDVHALCINGPAFDQVTTLSKFLCMGMPLSNVIAASTVNAAMALKRPELGTLKVGS
                     IGDATILSVRSGQFDYVDVVGEHMTGDTRIFSDGVVIAGRWWHPQDRSGFRPPINVR"
     gene            5200..6804
                     /locus_tag="VLJ17_11830"
     CDS             5200..6804
                     /locus_tag="VLJ17_11830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015687166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV23705.1"
                     /translation="MDRRAFLKSVVGAGALSAAGTLATPAISQRAAARALRFVPQADL
                     ANFDPIWGTQYVVRNASAMVWDTLYGMDERLQPQRQMVEAEEVSTDGLTWTFRLRPGL
                     KFHDGEKVLAKDVAASLDRWAARDQMGLLIRASQQELTAVDDRTVRWVLKKPFAKMLL
                     ALGKVSTQVAFIMPERIAKSDPFKQITEYIGSGPMRFVPGDWVPGARAAFEKFADYVP
                     RPEPASWLAGGKRMQVDRIEWVVMPDQATAAAALQNGEVDWWETPISDLVPLLRKNRN
                     VAVDIADPLGNIGSFRMNHLYPPFNDVRARRAVLMAMSQEDYMRAIVGDDNELWKPLP
                     GFFTPGTPLYTEEGGEILKGPRNLDAAKKLLAQSGYAGQPVTCLVAQDLPITKAQGDI
                     TADLLKRLGMNVDFAAIDWGTVGARRAVKTPPGQGGWQIFHTWHSGADCINPAVAIGV
                     RASGDRAWFGWPDVPAVEAEVAAWYDAKTLDEEKAAIRRLNKAALDGVVYAPTGFFLM
                     YQAWRKNVTGVVKGPLPFFWEVSKSV"
     gene            6876..8471
                     /locus_tag="VLJ17_11835"
     CDS             6876..8471
                     /locus_tag="VLJ17_11835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015687166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV23706.1"
                     /translation="MDRRTFLKGVGAGALAASEFATPAISQRASARTLRFVPQADLAN
                     FDPIWNTQYVVRNGAALVWDMLYGVDDKLQPQRQMIEAEELSADGLTWIFRLRPRLKF
                     HDGEPVTARDVVASLARWEMRDNMGLMIKAIENELVAVDDRTFRWVLKKPFPKLLVAL
                     GKVGTPSCFIMPERIAATDPFKPIGDYVGSGPMRLLRNEWIPGARAVFEKFPDYVPRQ
                     ESGSWLSGGKRILLDRIEWIVMPDPATASAALQNGEIDWWETPIADVVPVLQKNRNVM
                     VDIADPLGNIGSFRMNHLHPPFNDVRARRAILMAMSQEDYMRAAVGDDDLWKLSPGFF
                     TPGTPLYTEEGGDILKGPRKLDAAKRLLQESGYSGQPVTCLVAQDLPITKAQGEVTAD
                     LLRRLGMNVDFNAIDWGTTAARRAQKSPPGQGGWHMFHTWHAGAVCIDPSSYTAIRAN
                     GDKAWFGWPDVPKVEAEINAWYEARNLDEEKAAIRRLNKAACENVVYAPTGFFLAYQA
                     WRRNVSGIMKGPLPFFWGVDKAT"
     gene            complement(8706..9014)
                     /locus_tag="VLJ17_11840"
     CDS             complement(8706..9014)
                     /locus_tag="VLJ17_11840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23707.1"
                     /translation="MATLPLEGEGRTAEGSPTWNSLSVGIGQGFFADFALDPALPARF
                     GAAASKTWAPSLRHDGGECVTPAPGNISSRAGNSRAGPGIDDSAAKCPRQSISIMSIS
                     "
     gene            9083..10024
                     /locus_tag="VLJ17_11845"
     CDS             9083..10024
                     /locus_tag="VLJ17_11845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018315994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV23708.1"
                     /translation="MLTYVIRRILATIPVMAIVALFVFSLLYIAPGDPAAVIAGDQAT
                     PADVERIRASLGLDRPFLVRFGEWVWQILNGNLGTSIFTNLSVAAMIAQRIEPTLSLM
                     VVTLVFAVSIAVPIGVVAAWKADTLIDRAIMTFAVLGFSVPVFVVGYLLAFLFALQLD
                     WLPVQGYTQLSEGLWPWFENLILPAIALGCVYIALIARITRAAMLEVLQQDYIRTARA
                     KGIGQTGILFVHALKNAAVPIVTVIGIGIALLIGGAVVTETVFAIPGIGRLTVDAILR
                     RDYPVIQGIVLLFSFVYVLVNLLIDLLYIVLDPRIRY"
     gene            10063..10965
                     /locus_tag="VLJ17_11850"
     CDS             10063..10965
                     /locus_tag="VLJ17_11850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV23709.1"
                     /translation="MAVTAQVLAAAPDLPDILPPVQPRRGLVGFIRRHPAIAIGGALV
                     LAMLLIALLAPWLGTVDPTALAPARRTRGPSAAFWFGTDMLGRDVYSRVLYGTRVSLT
                     VGFSVAILASLTGLAIGLVSGFIRWADGLIMRVMDGLMSIPPILLAVALMALTRGSIS
                     NVITAITIAEIPRVSRLVRGVVLSLREQPYVDAAVAAGTRTPMIIVRHILPNTLPPMT
                     VQATYVCASAMIIEAILSFIGAGTPPTIPSWGNIMAEGRALWQVKPYIVFFPSIFLSV
                     TVLAVNLLGDGLRDALDPRMAKRL"
     gene            10975..11964
                     /locus_tag="VLJ17_11855"
     CDS             10975..11964
                     /locus_tag="VLJ17_11855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006615666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV23710.1"
                     /translation="MSLLEVENLQTHFRTPDGVTRAVDGVSFNVAAGETVAIVGESGC
                     GKSVTAYSILRLVPEPPGKIAGAIRFDGIDLLTLDDRAMRNIRGNHIGMIFQEPMTSL
                     NPVLTVGRQIGETLRLHQGLGPRVAEARAIEMLNLVGIAEPGRRARDYPHQLSGGMRQ
                     RVMIAAALACNPKLLIADEPTTALDVTIQAQILDLMAALRQQVGAAIILITHDLGVVA
                     EIAERVVVMYAGRKVEEAGVAELFGEPRHPYTRGLIGALPRLGSSLAGTETKLAEIPG
                     VVPDLKQRIAGCVFASRCPLVHDICRHVAPALESKAPGHFVACHFAPKAMVAA"
     gene            11961..12980
                     /locus_tag="VLJ17_11860"
     CDS             11961..12980
                     /locus_tag="VLJ17_11860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HSV23711.1"
                     /translation="MNLPLLQVNDLKKYFPLRRGLMTLAHGRRRWVYAVDGVSFHIDK
                     AETLALVGESGCGKSTVGRAVLRLFDITSGQVILDGARIDNMPADRLRPLRRRMQVVF
                     QDPFASLNPRMRVRDLLAEPIHNFGLASSSGELNGQVDSLLDKVRLPRDAGKRWPHEF
                     SGGQRQRIAIARALAAHPDLIVCDEAVSALDVSVKAQIVNLLRDLQCELGLALLFISH
                     DLAIVEHITHRVAVMYLGKIVELGPKRQIFGAPKHPYTEALLSAVPVPRPGAARKRII
                     LKGDVPSPINPPRGCHFHARCRYAFDRCRVEEPKLRPTPDGQFAACHLHDLPAEQNPL
                     ASNGK"
     gene            complement(13035..>13706)
                     /locus_tag="VLJ17_11865"
     CDS             complement(13035..>13706)
                     /locus_tag="VLJ17_11865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23712.1"
                     /translation="TVQQTLASLPKRHLIHDYTSRTRDVKYDAGLVDTFLHRQDRAYT
                     VAECLELVQQAGMRFMSWWDNILYYPEGQLVMSGPIYLKVNALPEESIWRFMELYNGT
                     LGQHCFCVCRPDRLESSYKIDFSSDAFMDYIPVLRCREVAAKWDVPENCITVQRHPWP
                     AYTLNPVTSALFRQIDGTRSIRNCFERAKLPARNAGDSGAICKAAFQHLWRLSYIFLR
                     IPARD"
BASE COUNT         2605 a         4324 c         4148 g         2629 t
ORIGIN      
        1 gaaatggcgc ggcaacctgg tgggcgtcga cctgccgcgg ctgatgcgca tggccgagga
       61 ggcgcgcgcc gcagtgacgc gccgcgccgg tttttcggtg aattttttga catgagacgg
      121 atgttcggcg cggggagcca atgaaaaatg accagacaat atcttgaaga tttcaccgtg
      181 ggccagatct tcggttccgg ccggctacgg gtagacaagg aggcgatcat agctttcgct
      241 gagcagttcg atccgcagtc ctaccatctc gatgaagagg ccgcgcgcaa atcggtcttt
      301 agcggactgg cggcgagcgg ctggcacact gcagcgctca ccatgcgcct cctcgtcgag
      361 agcgaattca agccagcggg cggcatccta ggtgtcggtt tcgacgagct gagctggcca
      421 cggccagtgc ggcctggcga cgaactgcac acaaagagcg aggtgctcga cgtacgccca
      481 tcgaaatcgc gtccagatcg gggcgtgatc agagtacgca cgacgacgtt caatcagaac
      541 ggcgaagcgg tgcaaatcta tacaggcaat ctcctcgtcc cgcgccgtcc aaccggcgca
      601 tacttgtgat tccgatcaca agtatcttcg ttatgccacg gcagaacatc aaggatgcgg
      661 tgagatcgct tggcttcgtc gccatttctg tgtctcggtg ctgcggttgc tcagcgccat
      721 aaccacccct ttgctcaacg cccactcgca aacaatctgg caggcccagt gtccacgcga
      781 atagccttgc caacccgggc tgagttcact cgtcattgcg aggtcggctg gccaattgaa
      841 aaaactctcc gtcatggatg ggaaacggtt gggagtcgcc catgaaacgc gcgggccatt
      901 atggcgccgt caaacaccgg cggaagcgga ctgcagcctc ccgctactgc accacgatgt
      961 gggcgagggt ttggatttgc gtatcgacca gcttgcgcgg ggagttcgtc gtctccagca
     1021 tatcccagct cttgagccaa tcgaaagtgc gttgaagttc atcagccggt atcggggccg
     1081 ggtcgcacac cacaatccga ttctcgcgga ggtcgtcgac ccgcaacgtc ccgatctcag
     1141 ggtccttcgg tctgtgataa tcgataaaat agtgcaggta agcatgctta tcagcattga
     1201 tgcgccgcac cgcttcgcgg acagcgcggt tgaaggctgc atagatctcg ccatctaccc
     1261 gatctgacgc aacctccgtg ccgtgataga aggccgaaca gatgatccga caacccttct
     1321 tttcagcaag cgaaatgtaa ggctcggtca aggtcgtcgc ctctatctcg cgctccatca
     1381 gagatgccag gcggtagcgc gagccgttgg gggcactgca cagtctgatc agatgacgcg
     1441 gcaagaagcc ttccagcaga tgcagggcga gataatgact gccgaaatag aaaggcaccc
     1501 caatcgtgcg gttggcgagt tgctgcggtg tgtagatcaa cgaatccgga cgcaccacga
     1561 tggccgcaaa ggtcacgatc gcacggcggc ccagctgacg gctgccgcgg ctcgtgtcct
     1621 ggactcgaca gtaattgccc cattcgcagg cattgtacat gtcagctttg ccctgctcca
     1681 ataaactgcc atgacttaga aagggatcga ggcccctcgg agtcgtgaca tttacggcgg
     1741 tcttgatcgc cggcgcatgg tcgcgttcca tccattcgac cgcaaggcct tcgcgcgcga
     1801 acacaccctc gtcataggca accagttccg gtaatccctg aaacggcgcc gtcgattcca
     1861 atatgatggt cctcatcgat ctgctccgca atttgtgccg gcttagttgt gctgcatcac
     1921 tctgccttga tctccagttc ctatgaccgg ccgcatcggc gtggcgtagg gcagccaagc
     1981 caatccattg cgccaacggc gggttcaccc cagtacccgg actcgtcgga ggtgcgcgac
     2041 actgtgctgt cccaggccgc catcggctca ttttcgtagt atacatattc catcgccacg
     2101 agttgactga agaattggag aggcatcccc atgaggaaaa accttggctt cgtgcttgcc
     2161 ctcttgctgg cgatggcttc aaacggcggt accatggcgc aaacgcaaac cctcgaacaa
     2221 aagatttgga ccctcctcga tgattccgag gccgcctatg tgtctctggg ggaggccgag
     2281 tttcgtgcac tgggtgcggg tttcgacctg ccggacggag gaagatcgat cgcccggctt
     2341 gcggagcaag ctcccggcgg cgccttcgat ccgcgcgacg tggcaaaact tgcgccgcaa
     2401 cagctgggct acaaagcctc ctggattgta gaacgctttc gccgctacaa cctcgaatgg
     2461 gacataacgg gtttgcgcct cgagagtctc gatccggacg ctaaaagcta tccgtggttc
     2521 atcgtgatga atggcggcgc agcaaatttc tacgaattct ttgtcgacct caaaaatcgt
     2581 cctggctgga cgcagtattt ggcgcagaag ctcaacgtca tgatcgtcac cattccgggc
     2641 aacttcaaat atggcggctg ggaacaaccg gtcgccgacg cgaagcgcca gcccgcctat
     2701 ctgctcgatc gcgacatctc gatggacgaa tacgaggtgc gcaatgccat cttcaccaac
     2761 agcctcatca tgcaggggct gaaggcacta gtgaccaagc acacatccgg tgacatcctt
     2821 ctcattgggc attctacgtc gggcgagcag tcgatgctcg cctacgaaga tccggaatta
     2881 agcgcccgcc tcaagggccg ctatctgggt tggggcagcg ggggacccgc gcgcctcgaa
     2941 ttgctgcgca ccgtcagagg caaggacatt cccgatcgcg ccggcgcctc cccgcccagc
     3001 ggcagaacac cgctctacac cctcgaacgc cgcgatccat cgagctattc gcgcggctat
     3061 agcggctttc tcaatccgct ctacgaaccc ggcatgtcgc accttcagat cgccgagcgc
     3121 tggctcgcga cggaggcgcg ccgacgtccc aatttcaagc aacagctcca gaacctggag
     3181 catggcgccg atctcggcca aaagggttgg gttgaaaacg aaatcgaatc cttgctcaag
     3241 cgcaccggta atccatggcg catcgcagtt gaggatgtcg cgaaggattt gtttgtcact
     3301 agcttcaccc gcatggacgg atttcggcgc atggtttgga cgacggcgca tttcgatcgc
     3361 aatcattgga atccggaaca gcccatgaag agcatcgagg tgttcatcgc caacgagtac
     3421 cgggcgaaaa atcccgatgc gcaaatccgg ctgatcaatt gggatccgcc gatgacgcat
     3481 tacggccacc tggagctgcc gaaacagctc gccgcggcgc atgtcagcgt ggtgcgctgg
     3541 ctggtcaggc cttgatggcg gcgtgactac aacgattggg gtagatcact gatccgtgga
     3601 cggcaaatcg ccggcggcgg ggttatttcg ttctgacttc gaagatcgtg gtgatcatct
     3661 tgtcaagcga gcaggaggtt cgtctatctg gcggacaagc atatgtgcgc cgataatccg
     3721 aactccttcc gggtacatcc gctttgccca tacccgtgac attggccatt cagcgaacat
     3781 taattggcgg acggaagccc gatcggtcct gcggatgcca ccagcggccg gcgatgacga
     3841 cgccgtcgga gaatatgcgg gtgtctccgg tcatgtgctc gccgaccacg tcgacataat
     3901 cgaactggcc gctgcgcacc gacaggatgg tggcgtcccc gatgctgcca accttcaggg
     3961 tcccaagctc cggccgcttc aaagccatgg cggcgttcac cgtactcgcc gcgatgacgt
     4021 ttgaaagcgg catccccatg cacagaaatt ttgacagcgt cgtcacctga tcgaaggccg
     4081 ggccgttgat gcacagtgcg tggacgtccg aggagatcgt atccggaaag aagccgttag
     4141 ccagcatgcc gcgcgcggtc ttgaatgcga acgagccctt gccgtgtccg atgtcgaact
     4201 tgacgccgcg ctggcgcgca cgccacaccg cgtccttgac cttcccttga tggtcgatcg
     4261 gcgcattggg aaacggccgg aaggcatggg tgagaacgtc gcccgggcgc agccgttcca
     4321 gcacctcctc gtagctcggc ggaggaaagt cgatatggca catcagcggc atcccggcct
     4381 cgttggcggc ctgcagggcg atgtcgagcg gagcgacgcc cgacgtgccg ctcgcgcccc
     4441 gcccaacccg caccttgatc ccgacgataa cgtcgcgatt ggcctccgcg acctcaaccg
     4501 cctcggaggg agccatcagg cgaagttcct cgctttcgcc gaccatcacg gttttcgaaa
     4561 atgcgaatat gccggcgaac gagatatgca gataggcaag gatgcggacc gcgctcggct
     4621 cgatgacgtg cttgcggaag cccgcaaagt tccccggtcc agtgctgccg gtgtcgacgc
     4681 aagtggtcac gccgctagtg cggcagaact cctctgcgtc gatgccgagc gaggtgccgc
     4741 cccaatagac atgggtatgc aagtcgatga ggccgggcgt gaccaggtgg cccgacacgt
     4801 cgagcacttc ggtgccagag cccgcggcga gatgcgcgcc gatcccggca atcttgccat
     4861 caccaaaccc gatgtccgcg acggtatcga ggtgctgcga cggatcgatg attcgcccgc
     4921 cccttaggat gagttcgatg gccatgtttc ctcgcgctaa cgtcggcccg ccgaccgacc
     4981 tctttctctg aagcgcggtt tcacgtacat tgcaacaaaa gttgcttttt gaaggggaga
     5041 gaccggcgcg tggcatcctg agcgaaaggt gcgacgtctt ttcgatatct gtgcccccgc
     5101 gcaaacgtgc gttgtgccca tttgactgga acaggcctca tttcggtacg gaaattgccc
     5161 gcaggggcaa cagggaaacc gcacaaaagg gtaccaatca tggatcgacg agcattcctg
     5221 aagtcggtgg tcggggctgg cgccctctcc gcagcgggca ctctcgccac cccggccatc
     5281 tcgcaacggg ccgcggcgcg cgcactgcgt ttcgtaccgc aggcggacct cgccaatttc
     5341 gatcccatct ggggtaccca atatgtggtg cgcaatgcgt ccgccatggt gtgggacacg
     5401 ctctacggca tggatgaaag gctgcagccg cagcgtcaga tggtggaagc cgaggaggtg
     5461 tcgacggacg gcctcacttg gacgttccgg ctgcggccgg ggctcaagtt ccacgacggc
     5521 gaaaaggtcc tggcgaagga cgtggcggcg agcctcgacc gttgggccgc gcgcgaccag
     5581 atgggcctgt tgatccgggc cagccagcag gagctcactg cggtcgacga tcgcaccgtg
     5641 agatgggtgc tcaagaaacc tttcgccaag atgttgctgg cgctcggcaa ggtctcaacg
     5701 caggttgcct tcatcatgcc ggaacggatc gccaagtcgg atccgttcaa gcagatcacc
     5761 gaatatatcg gcagcgggcc aatgcgcttc gtgcccggcg attgggtgcc aggtgcgagg
     5821 gcggcgttcg agaaattcgc tgactatgta ccgcgcccag agccggcgtc ctggctcgcg
     5881 ggcggcaagc ggatgcaggt cgatcgcatc gaatgggtcg taatgccgga ccaggcgacg
     5941 gctgcggcgg cattgcagaa cggcgaggtc gactggtggg aaaccccgat ctccgacctc
     6001 gtgccgctgt tacgcaagaa tcgcaatgtg gcggtcgaca tagctgatcc gctcggcaac
     6061 atcggcagtt tccgcatgaa ccatctctac ccgcccttca acgatgtgcg ggcgcggcga
     6121 gccgtgctga tggccatgag ccaggaagat tacatgcgcg ccatcgtcgg cgacgacaat
     6181 gagctatgga agccgctgcc ggggttcttc acccccggta cacccctcta cactgaggag
     6241 ggcggcgaga ttctcaaggg cccccgtaac cttgatgccg ccaagaaact gctggcgcaa
     6301 tctggctatg cgggtcaacc ggtcacttgc ctcgtcgccc aggacctgcc gatcaccaag
     6361 gcgcagggcg atattacggc cgacctgctc aagcgtctcg gcatgaatgt ggatttcgcc
     6421 gccatcgact ggggtacggt cggcgctcgc cgcgctgtga agacgccgcc cggtcagggc
     6481 ggctggcaga ttttccatac gtggcattcc ggggcggatt gcatcaatcc ggcggtcgct
     6541 atcggcgtac gcgccagtgg cgacagggcg tggttcggct ggccggacgt gcccgcggtc
     6601 gaagcggagg tagcggcctg gtacgacgcc aagacattgg acgaggagaa ggccgcgatc
     6661 cgtcggctca acaaggccgc gctcgatggg gtggtgtatg cgccgaccgg cttcttcttg
     6721 atgtaccagg catggcgcaa gaacgtcacc ggcgtcgtga aggggccgct gccgttcttc
     6781 tgggaagtga gcaagagcgt gtaaggtgcc gtcgcccgtg gcgacaccgc gccccggata
     6841 gagcgtctaa cacaagacgc acggaggtga tgctcatgga ccgacgcacc ttcctgaagg
     6901 gggtaggggc gggggcgctt gcagcgagcg agtttgcgac cccggcgatc tcgcaacgcg
     6961 cctcagcacg taccctgcgt ttcgtgccgc aagccgatct cgccaacttc gacccgatct
     7021 ggaacaccca gtatgtggtg cgcaatggcg cggcgctcgt ctgggacatg ctttatggcg
     7081 ttgacgacaa gctgcagcct cagcggcaga tgattgaagc ggaggaactg tcagcggacg
     7141 gcctcacctg gatattccgg ctacggccgc gcctgaagtt ccatgacggc gaacccgtga
     7201 ctgcaaggga cgtggtcgca agccttgccc ggtgggagat gcgcgacaac atgggcctca
     7261 tgatcaaggc gatcgaaaac gaactcgtcg ccgttgatga tcgcaccttc cgctgggtcc
     7321 tcaagaagcc atttcccaaa ttgctggtgg cgcttgggaa ggtcggaaca ccttcgtgct
     7381 tcatcatgcc ggagcggatc gcggcgactg acccgttcaa gccgatcggc gactatgtcg
     7441 gcagcgggcc catgcggctc cttcgcaacg aatggattcc gggtgcgcgg gccgtgtttg
     7501 aaaagtttcc cgactatgtg ccgcggcagg aatcgggttc atggctgtcg ggaggaaaac
     7561 gaatattgct cgaccgcatc gaatggatcg tgatgcccga tcccgccacg gcctccgctg
     7621 cgcttcagaa cggcgagatc gattggtggg aaacgccgat cgccgacgtc gtgccggtgc
     7681 tccagaagaa tcgcaacgtg atggtcgata tcgccgaccc gttgggcaat attggcagct
     7741 tccgcatgaa ccacctgcac ccgcccttca atgacgtgcg tgcgcgccgc gcgatcctga
     7801 tggcgatgag ccaggaggac tacatgcgcg ccgccgtcgg cgacgatgac ctgtggaagt
     7861 tgtcgcccgg cttcttcacg ccgggcacgc cgctctacac cgaggagggc ggcgacatcc
     7921 tcaagggccc tcgtaagctc gacgcagcca agcgcctgct ccaggagagc ggctattccg
     7981 gccagccggt cacctgcttg gtggcgcagg acctcccgat caccaaggca caaggcgagg
     8041 tgacggccga cctgctccgg cgactcggca tgaacgtaga tttcaacgcc atcgactggg
     8101 gtaccaccgc ggcgcgccgt gcgcagaaat caccgcccgg ccaaggcggc tggcacatgt
     8161 tccacacgtg gcatgcgggc gccgtctgca tcgatccctc aagctatacg gcgattcgcg
     8221 ccaacggcga caaggcgtgg ttcggctggc cggacgtccc caaggtcgag gctgagatca
     8281 acgcctggta cgaggcccgc aacctcgacg aagagaaagc cgcgatccgt cggctcaaca
     8341 aggccgcatg cgagaacgtg gtctacgccc cgaccggctt cttcctcgcc tatcaggcct
     8401 ggcgccggaa tgtgtccggc atcatgaagg ggccgctgcc gttcttctgg ggggtcgaca
     8461 aggcgacata gaagctcctc cattttatcc cctcccgctt gcggggaaac gagtcgtccc
     8521 taaccccccc gcatgccggg gcaatcgcat atgccgcgcc agtagcgaac acggatcacg
     8581 agctgaagtt ttgtcggaag agacgcgggc gcaaaaaccg cagcggcacc tgccggggct
     8641 gccggagcaa gctccggcac tacccaaagt tcgcccgcgg gcaaatgtca ttggcgagat
     8701 cgacgtcacg agatcgacat gatcgagatg gactggcgag gacattttgc agcgctgtcg
     8761 tcaattcccg gcccggctcg actattccct gcccgcgacg aaatatttcc cggcgccggt
     8821 gtaacgcatt ccccgccatc gtggcgcagc gaaggcgccc aagtctttga agcggcagcg
     8881 ccaaaccgcg ccggaagtgc cggatcgagg gcaaaatccg caaaaaatcc ctgcccgatc
     8941 cctaccgaca gggaattcca cgtcggactg ccttcggcag tccgaccctc tccctccagg
     9001 ggaagggtag ccatatgcga tcgccctgcc ccgcaagcgg gaggaaatgt ctgccccact
     9061 tgaaacctgc taccatcccg acatgttgac ctacgtcatc cgccgcatcc ttgccaccat
     9121 accggtgatg gcgatcgtgg cgctgttcgt gttcagcttg ctctacatcg cgcccggcga
     9181 tccggcggcg gtgattgcgg gcgaccaggc aactccggcc gatgtcgaac gcattcgggc
     9241 gagcctcggc cttgaccggc cgtttctggt ccgcttcggc gagtgggtct ggcaaattct
     9301 caacggcaat ctcggcactt cgatcttcac caacctgtcg gtcgcggcca tgattgcgca
     9361 gcggatcgaa ccgaccttgt cgctgatggt ggtcacgctg gtgttcgcgg tctcgatcgc
     9421 cgtacccatc ggggtcgtcg cggcgtggaa ggccgatacc ctcatcgacc gcgccatcat
     9481 gacatttgcg gtgctcggct tctcggtccc tgtgtttgtg gttgggtatc tgctcgcctt
     9541 cctgtttgcc ttgcagctcg actggctgcc agtgcagggc tacacgcaat tgtcggaagg
     9601 cctgtggccg tggttcgaga acctgatcct gccagcgatc gcgctcggct gcgtctacat
     9661 cgcgctgatc gcccgcatca cccgcgcagc tatgctcgaa gtgctgcagc aggactacat
     9721 ccgcacggcg cgcgccaagg gcatcgggca gacgggcatt ttgttcgttc atgcgctcaa
     9781 gaatgcagcc gtgccgatcg tcacggtgat cggcatcggc atcgctctcc tgatcggtgg
     9841 cgcggtcgtg accgagacgg tattcgcgat ccccgggatc gggcggctca cagtggacgc
     9901 catcctgcgc cgcgattatc cagtgatcca gggcatcgtg ctcctgttca gcttcgtcta
     9961 tgtcctggtc aacctgctca tcgacctgct ctacatcgtg ctcgatccga ggatccggta
    10021 ttgaacccgc cgccgaccgc agcggcgctc gcgccggata cgatcgctgt cacggcacaa
    10081 gtcctcgccg ctgcgcccga cctaccggat atcctgccgc ccgtgcaacc gcggcgcggg
    10141 cttgtcggat tcatccggcg gcacccggcc atcgctatcg gcggtgcact ggtgctcgca
    10201 atgctgctga tcgcgctgct cgcgccgtgg ctcggcaccg tcgaccccac tgcgctcgca
    10261 cccgcccggc gcacccgtgg cccctccgcc gccttctggt tcggcaccga catgctcggc
    10321 cgcgacgtct attcccgcgt tctctatgga acacgggtat cgctcacggt cggcttctcg
    10381 gtagcaatcc tcgcttcgct taccggcctt gccatcggcc tcgtttcggg tttcatccgc
    10441 tgggccgacg gcctcattat gcgggtgatg gacgggctga tgtcgatccc gccgatcctg
    10501 ctggctgtcg ctctcatggc gctcacgcgc ggcagcatca gcaacgtcat caccgccatc
    10561 acgatcgcgg aaattccgcg agtatcgcgc ctcgtgcgcg gcgtcgtgct gtcgttgcgc
    10621 gaacagcctt atgtggatgc cgcggttgcg gcaggcaccc gcaccccgat gattatcgtg
    10681 cgccacatcc tgcccaatac gctcccgccc atgacggtac aggccactta tgtgtgtgcc
    10741 agcgccatga tcatcgaggc gattctatcc ttcatcggcg ccggcacgcc gcccaccatc
    10801 ccgtcctggg gcaacattat ggccgaaggg cgcgcgctat ggcaggtcaa gccttacatc
    10861 gtgttcttcc cgtccatatt cctgtccgtg accgtgctcg ccgtcaatct gcttggcgac
    10921 ggccttcgcg atgcgctgga tccgcgcatg gcgaagcgtt tgtgaggagc tggcatgtcc
    10981 ctcctcgagg ttgaaaatct gcagacgcat ttccgcacgc ccgacggagt gacccgcgcg
    11041 gtggatggcg tctcgtttaa cgtcgcggcg ggcgagacgg tggcgatcgt cggcgagagc
    11101 gggtgcggaa aatcggtcac cgcgtactcc attctgcgcc tcgtcccgga gccgcccggc
    11161 aagatcgccg gcgccatacg tttcgacggc atcgaccttc tcaccctcga cgaccgcgcc
    11221 atgcgcaaca tccggggcaa ccatatcggc atgatcttcc aggagccgat gacgagcctt
    11281 aatccggtgc ttacggtggg ccggcagatc ggcgagacgc tgcggctgca tcaaggcctt
    11341 ggcccccggg tcgccgaggc gcgggctatc gaaatgctga accttgtcgg catcgccgaa
    11401 ccgggacggc gcgcgcgcga ttatccgcat cagctgtccg gcggcatgcg acagcgcgtg
    11461 atgatcgccg ccgcgctcgc ctgcaacccg aagcttctca tcgccgatga gcccaccacc
    11521 gcgctcgacg tcaccatcca agcccagatt ctcgacctca tggccgccct caggcagcag
    11581 gtcggcgctg ccatcattct catcacccac gatctcggcg tggtggcgga gatcgccgag
    11641 cgcgtcgtgg tgatgtatgc cggtcgcaag gtggaggagg cgggtgtcgc cgaactcttc
    11701 ggcgagccgc gccacccgta cacgcgaggc ctcatcggtg ccttgcccag gctcggctcg
    11761 tcgctcgccg ggacagaaac gaagctcgcc gagataccgg gcgtcgttcc ggacctgaag
    11821 caacgtattg ccggctgcgt gttcgcaagt cgctgccccc tggtccacga tatctgccgg
    11881 catgtcgcgc ctgctctcga aagcaaggcg ccgggccact ttgtggcctg ccacttcgcg
    11941 cccaaagcca tggtcgccgc atgaacctgc cgctccttca ggtcaacgac ctaaagaagt
    12001 atttcccgct gcgccgcggt ctcatgaccc tcgcgcacgg gcgcaggcga tgggtttatg
    12061 cggtggacgg cgtgtccttc cacatcgaca aggccgaaac gctggcgctg gtcggcgaat
    12121 cggggtgcgg taaatcgacc gtcggccgcg ccgttctgcg gctgttcgac atcacctccg
    12181 ggcaggtcat actcgatggc gcacgcatcg acaacatgcc ggccgatcgc ctccggccgc
    12241 tgcggcggcg catgcaggtc gtgtttcagg acccgttcgc gagcctcaat ccgcgcatgc
    12301 gggtgcgaga tctcctggcc gagccgatcc acaatttcgg cctcgcttcg tcgtccggtg
    12361 agttgaacgg ccaggtcgat tcacttctgg acaaggtcag gctcccgcgc gacgccggca
    12421 aacgctggcc ccacgagttc tccggcggcc agcgccagcg catcgccatc gcgcgagcgc
    12481 tcgcggccca tcccgacctc atcgtttgcg acgaagcagt gtccgctctc gatgtgtccg
    12541 tcaaggcgca gatcgtcaac ctgctcaggg acctgcagtg cgaactcggc ttggcgttgt
    12601 tgttcatcag ccacgatctc gccattgtcg agcacatcac tcatcgggtg gccgtgatgt
    12661 acctcggcaa gatcgttgaa ctgggaccca agcgacagat tttcggcgcc cccaagcatc
    12721 cctataccga agcgctgctc tcggctgtgc cggtgccgcg tccgggcgcg gcgcgaaaac
    12781 gcatcattct caaaggcgac gtgccgagcc cgatcaatcc gcccagagga tgccattttc
    12841 acgcccgctg ccgctatgct tttgatcgct gccgcgtgga agagcccaaa ctgcggccaa
    12901 ctcccgacgg gcaattcgct gcatgtcatt tgcatgatct gccggccgaa cagaatcctc
    12961 tggcgtcaaa cggcaagtga atgcatctgc acatcgcgcc ctcctcgctc agacgagttc
    13021 gttgcgcatg cggcctagtc cctagcaggt attcgtaaga agatataact aaggcgccag
    13081 agatgttgaa atgctgcctt gcagatggct cctgaatcgc cggcattccg agccggcagc
    13141 ttggcacgtt caaagcaatt acgaatagat ctcgtcccgt cgatttgtct aaatagagct
    13201 gatgtcaccg ggttcaatgt atatgcgggc cacggatgac gttggacagt gatgcagttt
    13261 tccggcacat cccactttgc ggccacttct cgacagcgca agacgggaat gtagtccatg
    13321 aaggcatcgc tgctgaaatc gatcttatag ctgctttcca gtcggtccgg acgacacacg
    13381 caaaagcaat gctggcccag cgtaccattg tacaactcca tgaatcgcca aatcgactcc
    13441 tcgggcaagg cattcacctt taaataaatg ggaccgctca tgactaactg gccttccggg
    13501 tagtacaaaa tgttgtccca ccaactcatg aagcgcattc ccgcctgctg aacgagctcc
    13561 aggcactctg ccaccgtata ggctctgtct tgacggtgta aaaaggtatc aacgaggccc
    13621 gcatcgtatt tcacgtcgcg cgttcggctt gtgtaatcat gaatgaggtg acgttttggg
    13681 agcgatgcaa gggtctgctg aacagt
//
LOCUS       DATILV010000523         8780 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1402906, whole genome shotgun sequence.
ACCESSION   DATILV010000523 DATILV010000000
VERSION     DATILV010000523.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8780)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8780)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8780
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1402906"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..179
                     /locus_tag="VLJ17_11870"
     CDS             <1..179
                     /locus_tag="VLJ17_11870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001278583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSV23713.1"
                     /translation="YRKGVLWSPSYFAASCGGAPISIIRQYIERQRNPQSDSYRRQRA
                     SAPSSGVKPQSLLR"
     gene            complement(378..3839)
                     /gene="dnaE"
                     /locus_tag="VLJ17_11875"
     CDS             complement(378..3839)
                     /gene="dnaE"
                     /locus_tag="VLJ17_11875"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008131047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HSV23714.1"
                     /translation="MALGFVHLHLHSAYSLLEGALPIARLAELAKADRQAAVALTDTN
                     NMFGALEFSDKMAGAGIQPIIGCTLSVDCGDQDHQTRSFGPGSVPQSLPRLVLLAATE
                     SGYRNLLHLNSRTYLGHPGNEPPHIKLDWLDGRSEGLIALTGGPDGLLDRAFMSGQAH
                     LVHTRADALMRLFGDRLYVELQRHGTADERMTEPVLIDLAYAKGIPLVATNEPYFATG
                     EDYEAHDALLCIAEGRLLAETERRHLTGEHRFKTRAEMMALFRDLPEALASTVEIAER
                     SSFRPLARKPILPRFSVPEAGAVEGAIDEASELRWRAVDGLNSRIAAHGIASGFTAEQ
                     YRERLDFELGVIERMKYPGYFLIVADFIQWAKSQRIPVGPGRGSGAGSLVAYALTITD
                     LDPIRFGLIFERFLNPERVSMPDFDIDFCQTRRDEVIRYVQGRYGRDQVAQIITFGSL
                     QARGVLRDVGRVLEMPYGQVDKLCKLVPQNPAAPVTLSRAIADEPRLQAERDSQPIVA
                     RAFTIAQKLEGLYRHASTHAAGIVIGDRRLDELVPLYRDPKSDMPVTQFNMKWVEQAG
                     LVKFDFLGLKTLTVLETAVKLIAARSIEIDLACIPLDDAKTYEMLARGETVGIFQVES
                     QGMRRALVDMRPDRFEDLIVLVALYRPGPMANIPTYCARKLGQERTDYLHPNLQPILQ
                     PTYGIITYQEQVMKIAQDLAGYSLGEADLLRRAMGKKIRKEMEQQRERFTSGAVARGI
                     APADAEAIFEACAKFADYGFNKSHSAPYALLTYQTAYLKANYPVEFLAASMTLDMGNT
                     DKLAEFRAEAKRLGITVEPPSINRSGVEFDVAGNIIRYALAALKGVGRTAVEAIVAVR
                     HQPFADLGDFARRINVRAVNKRVLESLAAAGAFDELERDRARATAAIDIVLATAQRAQ
                     DAAASGQSELFGSFAAPEPIKIPTVQGWLPAERLQREYDAVGFFLTGHPLDDYVAVLN
                     SMQVQSWAAFSRAVKSGVTAGRVAATVVSRAERRTKTGNKMGIIGLSDPTGQYEAVIF
                     AEGLQQYRDLLEPGSPVLLNVTAEAQGDEVRARIQTVELLDRAAAKVQKGLRIFLRDG
                     APLDAVAKRLDKVNGRAEGDGEVNLIVMLGAGAEVEVKLPGRYKVSPQIAGAIKAVPG
                     VVEVHAV"
     gene            complement(4228..4917)
                     /locus_tag="VLJ17_11880"
     CDS             complement(4228..4917)
                     /locus_tag="VLJ17_11880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV23715.1"
                     /translation="MSDDAPVIHLSRIERHYRQGDDRLDILSGAELAVWSGQSVALIA
                     PSGAGKSTLLHIAGLLEQQDAGEVFIDDAATSGLGDAARTRLRRIEIGFVYQFHHLLP
                     EFSALENVMLPQMVRGLARSDAEQRGLELLGYLGLKDRVGHRPSELSGGEQQRVAIAR
                     AVANAPRILLADEPTGNLDPRTSERVFSALTQLVRASGLAAIVATHNMDLAARMDRRV
                     TLRDGKVVEME"
     gene            complement(4922..6190)
                     /locus_tag="VLJ17_11885"
     CDS             complement(4922..6190)
                     /locus_tag="VLJ17_11885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit"
                     /protein_id="HSV23716.1"
                     /translation="MNEATGTRPFASFEWMLSMRYLRSRRREGFISFIAAISFLSLTI
                     GVAALIIVMAVMNGFRKELLDKILGLNGHMLIQPIDSPLTDWEQVTMRVAQVPGVRLA
                     EPVVEGQALASSPFNANGVLARGMRSADLAKLGSIANNLKQGTLEGFDQGQGIVIGRR
                     LADQLSLQVGDNLSLVSPRGAVTPMGTMPRIKPYRVAAIFEIGMSEYDAAIVFFPLKE
                     AQAYFNRAGDVTAIEVFVDNPDRIDSYRKLIAEAAQRPIYMIDWRQRNATFFGALQVE
                     RNVMFMILTLIVLVAALSILSALIMLVKDKTQNIAILRTMGASQGAVMRVFLITGTAI
                     GVIGTLTGFVVGTVFCANIENLRQFLSWITKTELFPPELYFLSRLPAEMDLGETTAVV
                     VLALTLSFLATLYPSWRAARLDPVEALRGE"
     gene            complement(6276..7598)
                     /locus_tag="VLJ17_11890"
     CDS             complement(6276..7598)
                     /locus_tag="VLJ17_11890"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004827 - proline-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006433 - prolyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HSV23717.1"
                     /translation="MRLSRYFLPILRETPKEAEIISHRLMLRAGMVRQEASGIYAFLP
                     LGLRVLNKVCSIVREEQDRSGAIELLMPTIQSADLWRESGRYDVYGKEMLRIKDRHER
                     DMLFGPTNEEMITEIFRAYVRSYKDLPLNLYHLQWKFRDEVRPRFGTMRSREFLMKDA
                     YSFDLDYAGARHAYNKMFVAYLRTFARMGLRAIPMVADTGPIGGNLSHEFIILASTGE
                     SEVFCHRDYLDLAIPDADVKFDDVAVIQGIVDTWTSRYAATSEKHDAPAFEALPADTR
                     LSARGIEVGHIFYFGTKYSAPMRAVVAGPDGDEHPVHMGSYGIGPSRLVAAIIEAFHD
                     DAGIRWPEAVAPFRVAILNLKQGDAKTDAASENLYRQLAIKGVEVLYNDLEERPGPKF
                     AATDLIGIPWQILVGPKGLAEGKVELKCRADGSRQLMTPADALDQLSR"
     gene            complement(8086..8358)
                     /locus_tag="VLJ17_11895"
     CDS             complement(8086..8358)
                     /locus_tag="VLJ17_11895"
                     /inference="COORDINATES: protein motif:HMM:NF018978.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1467 family protein"
                     /protein_id="HSV23718.1"
                     /translation="MPWITILAIYFIVWWLVFFTVLPWGVRSQDELGDVVRGTDPGAP
                     KAHGLKIKLVWTTVVATIVFGAFYWAFVTKAVAFDDLVTLWGLLKS"
     gene            complement(8367..8771)
                     /gene="mce"
                     /locus_tag="VLJ17_11900"
     CDS             complement(8367..8771)
                     /gene="mce"
                     /locus_tag="VLJ17_11900"
                     /EC_number="5.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006934701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA epimerase"
                     /protein_id="HSV23719.1"
                     /translation="MIGRLNHVAIAVRDIAAAARVYRETLGAVVSAAVPQTEHGVTTV
                     FISLPNTKIELLEPLGPASPIAKFLERNPDGGIHHVCYEVDDIIAARDRLKAEGARVL
                     GDGEPKMGAHGKPVLFLHPKDFLGTLVELEQA"
BASE COUNT         1835 a         2720 c         2610 g         1615 t
ORIGIN      
        1 gataccgcaa aggcgttctg tggtcgccaa gctattttgc tgcatcctgt ggcggtgcgc
       61 ccatcagcat cattcgccaa tacatcgaac ggcagagaaa cccgcaatca gactcatatc
      121 ggcgccaacg cgcctcagcg cctagctccg gcgtgaaacc ccagagcttg ctgcgctaaa
      181 attcttggtc aaggggcggc agcattacgc gagctgccag gcgctttagg gcccgaccgc
      241 gccattttct ttcccctccc ccgcttgccg gagaggctct gcatcggtgc cgtggaatcg
      301 ccaccttccc accctctccc gcaagcgggg aggaaaaacc gcggccagtc gcatgaaacg
      361 aagtttgccg cgaagcccta caccgcgtgc acctcgacca ccccgggcac ggccttgatg
      421 gcaccggcga tctgcgggct caccttgtag cggcccggca gcttcacctc gacctcggcc
      481 ccggcgccaa gcatcacgat gaggttgact tcgccgtccc cctccgcgcg gccgttgacc
      541 ttgtcgagac gctttgccac cgcatcaagc ggagctccgt cgcgcaggaa gatgcgcagg
      601 cctttctgca ctttcgccgc ggcgcgatcg agtaactcga cggtttgaat gcgggcgcgg
      661 acctcgtcac cctgcgcctc cgcagtcacg ttgagcagca cagggctgcc gggctccaag
      721 aggtcgcggt actgctgcag tccctcggca aagatgaccg cttcgtattg gccggtcggg
      781 tccgacagcc cgatgatgcc catcttattg ccggtcttgg tgcgccgttc cgcccgcgac
      841 accacggtgg cggccaccct tccggcggta acgcctgatt ttaccgcgcg ggaaaaggcc
      901 gcccaggatt gcacctgcat gctgttgagc acggccacat agtcgtcaag cggatggcca
      961 gtgaggaaaa acccgacggc atcgtattcg cgctgcagcc gttccgccgg cagccagccc
     1021 tgcacagtcg gaatcttgat gggctcgggt gcggcgaaac tgccgaacaa ctcgctttgg
     1081 ccgctcgcgg cggcgtcctg ggcgcgttgg gcagtggcga gcacgatgtc gatcgcagcg
     1141 gtcgcccgcg cgcggtcgcg ctctagttcg tcgaaggccc cggcggcggc gaggctttcc
     1201 agcacccgct tgttgacagc acgcacatta atccggcggg cgaaatcgcc gagatctgca
     1261 aacggctgat gacgcaccgc cacgatggct tcgaccgccg tgcggccgac ccctttgaga
     1321 gcagccagcg cataccggat gatgttgccg gcaacgtcga attcgacacc ggaacggttg
     1381 atcgagggcg gctcgaccgt aatgccgagg cgcttggcct cagcgcggaa ctcggcaagc
     1441 ttatcggtgt tgcccatgtc cagggtcatc gaggcggcga gaaattcgac cggatagttg
     1501 gctttgagat aggcggtctg ataggtgagc agcgcatagg gcgctgaatg cgacttgttg
     1561 aaaccgtagt cggcgaactt ggcgcaggcc tcgaagatgg cctcggcatc ggccggcgca
     1621 atgccgcgcg cgacggcgcc cgaggtgaat cgctcgcgct gctgctccat ctccttgcgg
     1681 atcttcttgc ccatggcgcg ccgcagcagg tccgcctccc cgaggctgta gccggcgagg
     1741 tcctgagcga ttttcatgac ctgttcctgg taggtgatga tgccgtaggt cggctgcagg
     1801 atcggctgca ggttcgggtg cagatagtcg gtgcgttcct gaccgagctt gcgggcgcaa
     1861 taggtcggga tgttcgccat cgggcccggc cgatatagcg cgaccagcac aatcaagtcc
     1921 tcgaagcgat cgggacgcat gtcgacaagg gcacggcgca tgccctgact ttccacctgg
     1981 aagatcccga ccgtctcacc ccgggccaac atctcatagg tcttggcgtc atcgagcgga
     2041 atgcaggcga gatcaatctc aatgctgcgt gccgcgataa gcttcacggc ggtttccaga
     2101 accgtgagcg tcttgagacc aagaaagtcg aatttgacga ggccagcctg ctcaacccac
     2161 ttcatgttga actgagtaac cggcatgtcg gatttggggt cacgatagag gggcaccaat
     2221 tcgtcgagcc gtcggtcgcc gatcacgata ccggccgcgt gggtcgaggc atggcggtac
     2281 aacccctcca atttttgcgc gatcgtaaag gcgcgggcaa cgatcggctg gctgtcgcgc
     2341 tcggcttgca gtcgcggctc gtcggcaatg gcgcgcgaca atgtcaccgg cgccgccgga
     2401 ttctgcggca ccagcttgca cagcttgtcg acctggccat agggcatttc cagcacgcgt
     2461 ccgacgtcgc gcagcacgcc gcgcgcttgc aggctgccaa aggtgatgat ctgagccacc
     2521 tgatcacgac cgtagcggcc ttgtacgtaa cggatcactt cgtcgcgtcg ggtttggcag
     2581 aagtcgatat cgaagtctgg catcgagacg cgctcaggat tgaggaagcg ctcgaaaata
     2641 agcccaaatc gaatcggatc gagatccgtg atggtcagcg cataagcaac cagggaaccc
     2701 gcaccagaac cgcggccggg tccgaccgga atgcgctgag atttggccca ttggatgaaa
     2761 tcggcgacga tcaaaaaata gcccggatat ttcatccgtt cgataacgcc gagctcaaag
     2821 tctaaccgct cgcggtactg ctccgcggta aagccggacg caatgccatg ggcagcaatg
     2881 cggctattga ggccgtccac cgcacgccag cgcagctcag aggcttcgtc gattgccccc
     2941 tcaaccgcac ccgcttccgg tactgaaaaa cgcggcaaga tcggcttgcg tgccagcggc
     3001 cgaaacgacg agcgctcggc gatctcgacc gtcgacgcca gcgcctccgg tagatcgcga
     3061 aacagcgcca tcatctcggc gcgggtctta aagcggtgct cgccagtaag gtgccgacgc
     3121 tcggtctccg ccagaagccg cccttccgcg atgcacagca gtgcgtcatg ggcctcatag
     3181 tcctcaccag tcgcgaaata gggctcgttg gtggcaacga gcggaatccc cttggcatag
     3241 gcaagatcaa tcaggaccgg ctcggtcatg cgctcatcgg cagtgccatg ccgttgcagc
     3301 tccacataga gccgatcgcc gaacagacgc atcagcgcgt ccgcgcgtgt atggacaaga
     3361 tgggcctgtc ccgacatgaa ggcccggtcg agcaggccgt caggaccgcc cgtcagcgcg
     3421 atcagacctt cgctgcgccc atcgagccaa tcgagtttga tatgtggcgg ttcgttaccg
     3481 gggtgaccca ggtaagtgcg cgaattgaga tgcagcagat tgcgataccc ggattcggtt
     3541 gcagcgagca gaacgagccg cggcagagat tgcggcacac tgcctggtcc gaacgagcgc
     3601 gtctgatggt cctggtcacc gcaatcgacc gacaacgtgc agccgataat cggctggatc
     3661 ccggcccccg ccatcttgtc ggagaattcc agcgccccga acatgttgtt ggtgtcggta
     3721 agcgcaaccg ccgcttgccg atccgccttg gcgagctcgg ccagccgcgc gatcggcaaa
     3781 gcgccctcaa gcagtgaata ggcggaatgt agatgaagat ggacgaagcc gagcgccatg
     3841 agtgtgcttc cccccgggat tgccccgcac cggctgatcg gcaccagggc gaagccgctg
     3901 tcgattgctg tgggatcgtg cgggctcgat gccggcctgt ccaccgcgct gacaaacgca
     3961 gaccacacaa tgcacagctt cgtgcgcaaa ccgccccatt ccgatcgtca caacaccgac
     4021 gacagcacct cggcccaaac cgcgatcatg ctgatgaaca acgtaatcga gacgagtgcg
     4081 gcggcttctt caacgacgat acgaaccatg ttgccctcct ccgttacctt ccggaagcga
     4141 acgcaaggag aacatagttc ttgttatgtt ctgagtcaaa tgtcgatttg acgaccgcga
     4201 cgaaaatggt ttctcgaagg ttaagagcta ttccatttcc accaccttgc cgtcgcgcag
     4261 cgtcacacgc cgatccatgc gtgcggcaag gtccatgttg tgggtcgcga cgatagcggc
     4321 aagtccggag gcgcgaacga gttgggtcag cgccgagaaa acccgctcgg acgtgcgcgg
     4381 atcgaggttt ccggtcggct catcggccaa gagaatgcgc ggcgcgttgg ctaccgcgcg
     4441 cgcgatcgca acacgctgct gctcgccgcc cgataattcg ctcgggcgat ggccgacacg
     4501 gtccttaaga ccgagatagc cgagaagctc cagcccgcgc tgctcggcat cgctcctcgc
     4561 aagcccgcgg accatctgcg gcagcatcac gttttcgagc gcggaaaatt ccggcagcag
     4621 atggtggaac tgataaacga acccgatctc gatccgtcgc agcctagtgc gggcggcatc
     4681 gccgagcccc gaagttgccg cgtcgtcgat gaagacttcg cccgcatcct gctgctcaag
     4741 caacccggcg atatgcaaca gcgtcgattt gccggcaccg gacggcgcaa tcaatgccac
     4801 cgattgccca gaccacaccg caagctccgc cccactgaga atatccagcc ggtcatcgcc
     4861 ctgacgataa tggcgttcaa tccggctcag atggatcaca ggtgcgtcat cggacatgcg
     4921 atcactcacc gcgcagcgcc tcgaccggat caagccgtgc cgcacgccag gacggataga
     4981 gcgtcgcaag gaacgacaac gtcaaggcca gcaccaccac ggcggtggtt tctcccaaat
     5041 ccatttcagc gggcaggcgt gagaggaaat agagttctgg cggaaaaagc tcagtcttgg
     5101 tgatccagga cagaaactga cgtaaatttt cgatgttggc gcagaacacg gtgccgacca
     5161 cgaatcccgt caaggtgccg atgacgccga tcgccgtgcc ggtgatgagg aaaacgcgca
     5221 tcaccgcccc ctgggaggcg cccattgtgc gcaggatcgc gatgttctgc gtcttgtcct
     5281 tcaccagcat gatgagagca gaaaggatgc tcagtgcagc caccagcacg atcaaggtca
     5341 ggatcatgaa catcacgttg cgttcgacct gaagcgcgcc gaagaaggtg gcgttgcgct
     5401 ggcgccaatc gatcatgtag atcggccgct gcgcagcctc ggcaatcagc ttgcgatagc
     5461 tgtcgatgcg gtccggatta tccacaaaga cttcgatcgc cgtgacgtcg ccggcgcgat
     5521 taaaataggc ctgggcctcc ttcagcggaa agaacacaat ggccgcatcg tattccgaca
     5581 tgccgatttc gaagatcgcc gccacccggt agggcttgat gcgcggcatc gtgcccatcg
     5641 gcgtcaccgc gccgcgcggc gaaaccagag acagattgtc gccgacctgc agggacaact
     5701 gatcggcaag ccggcgcccg atgacgatgc cctgaccttg gtcgaacccc tcgagtgtgc
     5761 cctgcttgag gttgtttgca atcgatccca acttggcaag gtcggcgctc cgcatgccac
     5821 gcgccaatac cccgttggcg ttgaatggcg aggatgccag cgcctggcct tccaccaccg
     5881 gctccgcgag acgcaccccg ggtacctgcg caacccgcat cgtcacttgc tcccaatcgg
     5941 tgagcggaga atcgatcggt tgaatcagca tgtggccgtt gagcccaaga atcttgtcga
     6001 gcagctcctt gcggaatcca ttcatcaccg ccatcacgat gatgagagcc gcaaccccga
     6061 tggtgaggct gaggaatgag atcgccgcaa tgaaggaaat gaaaccctcc cgccgccgtg
     6121 agcgcaaata gcgcattgac agcatccatt cgaacgacgc aaacggtcgg gtgccggtgg
     6181 cttcgttcat ggctaccccc tgcccccggg tttgagcaga ttccggtaga atcgcgcctg
     6241 ggcgattcgg gtatctcaca gggtcgagca tagcttcacc gcgacagttg atcgagcgcg
     6301 tcggctggcg tcataagctg gcggcttccg tcggcgcgac atttgagttc gactttgccc
     6361 tccgcaagtc ccttcggccc gaccagtatc tgccacggaa tgccgatcag gtcggtggcg
     6421 gcaaatttcg ggccgggccg ctcttcgaga tcgttgtaga gaacctcgac gcccttgata
     6481 gccaattggc gatataggtt ctcggacgcg gcgtccgttt tggcatcgcc ctgcttgaga
     6541 ttgaggatcg caacccggaa cggcgcaaca gcctctggcc atctgatgcc ggcgtcatca
     6601 tggaaagcct caatgatggc ggcgacgagg cgcgacggcc cgatgccata tgagcccatg
     6661 tggactgggt gctcgtcgcc gtcggggccg gcaacgaccg cccgcatcgg tgcggaatat
     6721 ttggtgccaa aatagaagat gtggccgacc tcgatcccgc gtgccgagag tctggtatcg
     6781 gccggtaagg cctcgaaagc gggggcatca tgcttttccg aggtcgcagc gtagcgcgat
     6841 gtccatgtat cgacgatacc ttggatgaca gcgacgtcat cgaattttac gtccgcatcg
     6901 ggaattgcca aatcgaggta gtcgcggtga cagaacactt cgctttcgcc agtggaggcc
     6961 aaaatgatga actcgtgact gaggttgccc ccgatcggcc cggtgtcggc gaccatcggg
     7021 atcgcccgca gccccatgcg tgcgaaggtg cgcagatagg caacaaacat cttgttgtag
     7081 gcatgacgag cgcccgcata gtcaagatcg aacgaatacg catccttcat gaggaattcg
     7141 cgcgaacgca tggtgccgaa acgcggacga acctcgtcgc gaaacttcca ctgcagatga
     7201 tagagattga gcggtagatc cttgtaggat cggacatagg cgcggaatat ctcggtgatc
     7261 atctcctcat tggtcggccc aaacagcatg tcgcgctcgt ggcgatcctt gatacgcagc
     7321 atctccttgc cgtaaacgtc atagcgcccg ctttcacgcc agagatcggc cgattggatg
     7381 gtcggcatca ataactcgat ggcccccgag cggtcctgct cctcacgcac aatgctacaa
     7441 accttgttga gcacacgcag tccgagtggc aggaacgcat atatgcccga cgcttcctgc
     7501 cggaccatgc cggcgcgcag catcaagcga tgagatatga tctctgcctc tttgggcgtt
     7561 tcgcgcaaaa taggcaaaaa atatcgggaa agtcgcatgg gctccgcact cgattcgcat
     7621 tggggctggc gtcacagtga aaccggatcg ccccgcaaaa cacaagagca ccaagcaatt
     7681 caacgggttt tcgcgccacc ggacggggca cagcgccatt gaccggccat ggtgcagtgc
     7741 acgacaagcc tcgtgacaaa ttagaacttt ttaagtacga gttatttact cgcaattgca
     7801 cagtcagcaa tgcataaata gttggctgtc gggcgagtgt ggtccaggtc tgagggagga
     7861 acaaccggcg gcgcggctaa ttcgcggcta ctccaaaaaa aaaatcggag atgaccggga
     7921 gaatacttga agaattcaaa gcagggcatt ggctctgctt tattttttgt acaacctgca
     7981 tctctacggc tgcaacaggc tttatccaca actaaaacct gtcgaggtcg cagaccgagt
     8041 tcgtacttca atcgaaatgt ccccggaggg cgcggacctg agggatcatg atttcagtag
     8101 cccccacagt gtaaccaagt cgtcaaacgc caccgctttg gtgacgaaag cccaatagaa
     8161 ggccccgaac acgatcgtcg ccaccaccgt cgtccacacc agtttaattt tgagcccgtg
     8221 cgccttgggg gcgcccggat cggtgccacg cacgacgtca ccaagctcgt cctgggagcg
     8281 aacgccccac ggcagcacgg taaaaaacac cagccaccag acgatgaaat agatagccag
     8341 gatcgtgatc cacggcactg ctcacctcat gcctgttcga gctcgaccag cgtgccgaga
     8401 aaatctttgg gatgcaagaa cagcaccggc ttgccatggg cacccatttt gggctccccg
     8461 tcacccaaca cgcgagcgcc ctccgccttg aggcggtcac gcgccgcaat gatgtcatcg
     8521 acttcgtaac agacgtggtg gataccgccg tccggattac gctccagaaa tttcgctatc
     8581 ggcgatgcgg gaccgagcgg ttcgagcaat tcaatctttg tgttcggcaa agagatgaac
     8641 acggtggtga cgccgtgctc ggtttgcggg accgctgccg acaccaccgc gcccagggtt
     8701 tcgcgataga ccctggcggc ggccgcaatg tcgcgcaccg caatcgccac gtgattgagc
     8761 ctgccgatca tgacccgaac
//
LOCUS       DATILV010000524        18116 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1914950, whole genome shotgun sequence.
ACCESSION   DATILV010000524 DATILV010000000
VERSION     DATILV010000524.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 18116)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18116)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18116
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1914950"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            522..1238
                     /locus_tag="VLJ17_11905"
     CDS             522..1238
                     /locus_tag="VLJ17_11905"
                     /inference="COORDINATES: protein motif:HMM:NF012610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HSV23720.1"
                     /translation="MTQLRDESSDHASVYERLKALTVNYRFRPHEQLLIGELAEQLHV
                     SPTPVREALIRLQGEALLDVTPRRGFFAKTLNLKEMIDLVRFQFVILSSSVEHAVYTL
                     DGAVEEICSLVPTADGESDISSMIDAVSERSLDQLEDDVRWVEQVSARIAALSENDVM
                     MSALDNVNDRTHYVRMIDLSDPERSGEVRRSFEAFSFALQRKETPAALAILKRELDVQ
                     IDRMPTLVREGINRAYTSLC"
     gene            1824..2558
                     /locus_tag="VLJ17_11910"
     CDS             1824..2558
                     /locus_tag="VLJ17_11910"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV23721.1"
                     /translation="MLATCRTTTHDLSSQPFEVAKPIVLLAGEESFVGLLKYVLELDD
                     FACHYTKDGNGVASLAEKCRPDLIALDSTLGQGAALARQQLSGNPRTRDIPVIIMISA
                     AEDIEQLKIRSLDPTDYLLKPFVPGKLIARFRSILRPPQTVGPNGTISFYDIRMDVKA
                     HRLFRNKREIHVGPLEFRLLQHLMNHPAQVFSRRQLLQCVWAKDIHVILRTVDVHVSR
                     LRKALNDGNEPNYIRTVRAIGYSLDA"
     gene            2670..2852
                     /locus_tag="VLJ17_11915"
     CDS             2670..2852
                     /locus_tag="VLJ17_11915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23722.1"
                     /translation="MSPDLLLWLAFALKIIATTVFVVARSLITERAGALVGALVVTLP
                     ASAGPAYVLLAMDYEA"
     gene            3174..3479
                     /locus_tag="VLJ17_11920"
     CDS             3174..3479
                     /locus_tag="VLJ17_11920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23723.1"
                     /translation="MSGKVGPVLSGSLALFPIALSSTGLILHRRIGGPATAAVMASAG
                     FATGLALLHLTAAAGHSGSTLPHIAGERWMEYGLVGHATPRGNARAPDRGRPRPTVN"
     gene            complement(3603..4529)
                     /locus_tag="VLJ17_11925"
     CDS             complement(3603..4529)
                     /locus_tag="VLJ17_11925"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HSV23724.1"
                     /translation="MRLDWLRAFRAVMQTGTVTGAAAVMLRTQPQVSRMISSLEGSLE
                     LRLFSRDGRRLIPTEEGLQFFQYIEPLLFGLDGVRNVAEDIKHKRGRPLVIAAEPFLL
                     HTLLPEAIHALSQKWDLKYAVDICVRGLGLWMSHSNADLAVVALPFSQTDMDRLIFAE
                     AEVVLVLPPGHALTAHETIGIPDLRHERFVALRPSTLLRAQIDLAAAQAGVSINPVLE
                     AASGAAACEFVARGLGVTIADPIVAASFRSKGVSVKRLSTNLRLTYGYLIPKGSESIE
                     QISRVMYAVADAAARLGGQFVTLDASWQRTLA"
     gene            complement(4556..5344)
                     /locus_tag="VLJ17_11930"
     CDS             complement(4556..5344)
                     /locus_tag="VLJ17_11930"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019170095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV23725.1"
                     /translation="MKIASAALLISVAAVYLFLLLPIAIVVLASFNAAEYLSFPPTGL
                     SFRWYWAFLSSPSFTSAFFVSIVVGLVAAAAATLIGTPAAIFYVRFLRRRQDEFRLAM
                     LAPMLLPEVLTAIALLFFFNQVFIGTQTPLPLILGHIVITLPFVFLTVSSALYNLPVA
                     VEEAARTLGASSWKAFRRVTFPLIKSGIVTGAMFAFIMSFDNVNISLLLKAIGTSTLP
                     IQLFDYLRYDFDPTAAAASTISVGVTMVIVLAIDRIYGLRAVRF"
     gene            complement(5341..6198)
                     /locus_tag="VLJ17_11935"
     CDS             complement(5341..6198)
                     /locus_tag="VLJ17_11935"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV23726.1"
                     /translation="MTQASEIGVRRWLFAVPALSLVGLFVLIPYINIGIMSFRTPSTT
                     APYGPGFTVANYVHILSDSLYLSLLAETLLFAIVTTAVCLVLAFPVAFHLARTTSRWR
                     GLLYAGVLSPLLTGVVIRCFGWIVLLANNGLVNQALGTLGVGPFQLMYNATGVTIALV
                     HVFLPLMILPLMNAIQSIDPHLEEAARTLGASRMRVFQRIALPLIWPGLQSGVILVFV
                     LAASAYVIPMLLGGGRVQTLPTVMVQQLMGGLLWPFGAALALVFSAAVLASVWAFALL
                     GRRRMRRLA"
     gene            complement(6195..7247)
                     /locus_tag="VLJ17_11940"
     CDS             complement(6195..7247)
                     /locus_tag="VLJ17_11940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007688894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV23727.1"
                     /translation="MSSLSIQALTKCYAGAVAVQDIDLDVAEGEFVSLLGPSGCGKTT
                     TLRCVAGLEIPTSGKILFGDRDVTRLLPERRFIGMVFQNYALFPHMTIRENIGFGLEM
                     RGMRGSEAGKRISSVLDMVQLTGFEDRWPRQLSGGQQQRVALARALIVEPAVLLLDEP
                     LANLDAKLRDEMRLFIRSLQERIGITTLYVTHDQAESMTMSDRIVVMFAGRIHQAGTP
                     QDIYDRPATTDVAKFIGQANLIAGKVVHQCNGVATVDTPVGRLLCATKHAIEPGARAT
                     AMVRPEAMRLVKECSTSALSGRIVERHFLGNIVDYRVATADGTILAVQALGSIVHEAG
                     EVVSVQIDPEKAWLLE"
     gene            complement(7287..8945)
                     /locus_tag="VLJ17_11945"
     CDS             complement(7287..8945)
                     /locus_tag="VLJ17_11945"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HSV23728.1"
                     /translation="MNVRPVFSSAVRFQVMWTRVMALVEEQAQTLIRTAFSPIVRESG
                     DLSAGIFDTSGRMLAQAVTGTPGHINTMARSVKAFLAVFPTETMNEGDVYVTNDPWHG
                     TGHLFDYVVVTPAFHHGRLVAFFACTGHMTDVGGIGLSPEGSDLFMEGVAIPIMKLVD
                     RGATNHTLIQIAKANSRMPAELEGDIYSLIAANEIGARRLRELLVEMGQWDIDVLADH
                     IVESSRRAMMQRIAALPHDEATHRMVVDGFETPIDLVVRLTISQLGIRADWTGSSAAS
                     RFGINVPLNYAAAYTSYALTCAIAPDLPNNEGTLSAFDVTAPSGCILKAEHPQPVSCR
                     HIVGGLLPDVVLGCFDKIVPGVVPAESASALWTLTFRGDYSDKPFSVSIVTNGGTGAR
                     PAHDGLSATSFPSAVRGTPVEVIEATTPLVFWRRELRQNSGGEGTTRGGLGQDIEIGT
                     RGISPLTFIAAFDRVDHAARGRSGGGPGAAGELRVKDGRSLSAKGAHQIEAHERLIIR
                     TPGGGGYGDPHQRCMVARAADRSAGYVSDDDTGQQCSDREGDLG"
     gene            complement(8942..11050)
                     /locus_tag="VLJ17_11950"
     CDS             complement(8942..11050)
                     /locus_tag="VLJ17_11950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014765493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HSV23729.1"
                     /translation="MISASSTEQRGARLSADIGGTFTDVVLEHGPQRWSRKLLTTHAM
                     PEQGLLLGIAEILQESGVSAEDVDWFVHGTTLATNAILERRGARTALITTHGFRDVLE
                     IGYEGRFDPMDLALVKQKPLIPRELRFTVVERISAAGDVLQPIDEECLATIAASLRQE
                     RIESIAVGFLHAYANPTHERKVRDILQALAPDLSISLSSDVCPEIREYERISTTCANA
                     YIQPLIAAYLVRLSQRLFDLGLRCPAFLMTSSVGVMPLELAKKVPIRLVESGPAGGAV
                     LSSSIAAELDEQRVLSFDMGGTTAKICLIADGKPQVDRLFEVDRAGRFKKGSGLPIRI
                     PVVQLVEIGAGGGSIASVDAMMRISVGPQSAGSEPGPACYGRGGRKPTVTDADLLLGK
                     IDPNRFAGGRIELDPRRAEATFRTEIGRVMGLQVLEVAAGTALMVDETMANAARVHAA
                     ELGRELSDHTMIAFGGAAPLHAAHLAEKLGMARVIIPNGAGVGSAMGFLRTPLAYDVV
                     VSRPMRLDTYDPSVVADVLQAMQARATEVMSTLAGVGELAITHAADMRYVGQGHELTV
                     PFGGGIPSAASLRETFEQRYAALFGRVIHGASVEVLSWQMRLSQETWRPHTRKPKTLP
                     VVASQSRHRREVFDPLTGKFEPYSVYERNALGPGSEVNGPALIVEDDTTTVVTAAFNV
                     RVDAIGHLILERVATPGVSR"
     gene            11372..12586
                     /locus_tag="VLJ17_11955"
     CDS             11372..12586
                     /locus_tag="VLJ17_11955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011581701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HSV23730.1"
                     /translation="MGGIAALSRPGTTTGVAPAEEDIKPLDIASVAREFPIKAKRSYL
                     NNASIGPLSNPVIAAMEVFLHDVRDRGRNNYPNWCSYADNKIKGRIARLIGARTNEIA
                     FVKNTTEGLVTVANGLDWRDGDNVIIADIEYPSNVYCWMRLAKRGVSIRWVKSEGGRV
                     TVDALAEAIDSKTRLISLSAVQFSNGYRQDLALTSELCAKRGVQLNLDAIQWVGALEM
                     DVSRYHIDFMAVGGQKWLLAPIGTGFFYCNQDSLDCLDPPSVGYHSVDKGEAHMDYEL
                     AYRPDAGRFEEALVNFPGIWGLDAAVKILLGLGSRHVERHVLDLTEFAAERLKRAGCE
                     VVSPIGERERSGILSFRLPHADAETAAEQLRARGIDVAVRGNALRISPSYYNDRPEIE
                     HLVQELSALHPR"
     gene            complement(12641..13615)
                     /locus_tag="VLJ17_11960"
     CDS             complement(12641..13615)
                     /locus_tag="VLJ17_11960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase"
                     /protein_id="HSV23731.1"
                     /translation="MNRASPKLSQPWEWPEGHWRQIINRVRAGRRLRPSAWKGGARCA
                     IALSFDSDHESSELRNGGQSIGGLSWGHYGSRAAMPRILKVLARYAVPATFFVPAVVA
                     RLHVEEQRGVIAEGHEIGLHGWIHENNSTLPAGAERELALRAAETVEAVTGVRPVGMR
                     TPSWDFSSQTLVIAKEIELLYDSSLMADDDCYELLLDGAPSNVLEVPVEWIRDDAAYL
                     WYNRTSGTRPQLSPSDVFDIFRREFDAAYDEAGLFQLTMHPHVIGYRSRIWILEEIIR
                     HARARPDVWFATHRDVARWARDHAVCTVGRALSQAEGSAALGTTAGAE"
     gene            14011..15012
                     /locus_tag="VLJ17_11965"
     CDS             14011..15012
                     /locus_tag="VLJ17_11965"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HSV23732.1"
                     /translation="MPIFHDTSEIVTDDIILDISDKLTANGNDIFLKLEALNPCGSIK
                     LKTARYLVDAVLKDCSKKTPRLIESSSGNLGVALASICAERSLPFECVVDKNTLKDKK
                     DHIASLGGRVTVITEPDENGGYLGSRLQYIKDRLARDPDLVWTNQYGNEANILAHYST
                     TAPCLLRAIGSISYLFVGAGSTGTLLGCVRYFHEHSPGTHIIAVDARGSVTFGGRPGK
                     RHIPGIGTSKRPEMLDQSNLYPHEIVYIEERDAIDQCRRFSRRSGILIGGSTGSVLAA
                     TEQYIRRHGLSGHVIALISPDLGSSYLPTIYNDRWVHEHFPEAHAPDELELLAGLRA"
     gene            15103..15567
                     /locus_tag="VLJ17_11970"
     CDS             15103..15567
                     /locus_tag="VLJ17_11970"
                     /inference="COORDINATES: protein motif:HMM:NF014273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HSV23733.1"
                     /translation="MDCRFIKPQQLKPTEEHDPQAVSALAAKIARDGVWRAPVLVHRG
                     NLAILDGHHRRQAAIDMHLCVIPCFVCSYAYDNIQLDTWRPDYRPTASDVFRAASTGH
                     LFPRKTTRHRFPQLGLHFAIPLDLLMEHGKSAVDKHLLARLNARLAVALSQC"
     gene            15594..16010
                     /locus_tag="VLJ17_11975"
                     /pseudo
     CDS             15594..16010
                     /locus_tag="VLJ17_11975"
                     /inference="COORDINATES: protein motif:HMM:NF013486.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family N-terminal
                     domain-containing protein"
     gene            16092..16754
                     /locus_tag="VLJ17_11980"
     CDS             16092..16754
                     /locus_tag="VLJ17_11980"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HSV23734.1"
                     /translation="MRLRRAAEIAEHSIAAALRVARAGASEIDLARAFHEQTIREGAF
                     PVLGCIGFGSRSAMVNVQPSDRKLQPNDVIRFDVGGRYQHYRADIARIAVRGKPSKKL
                     TTYYHALHMGVRCAYDVVRPGAAASDIFLAVVNAVRSNGLPHYQRTHVGHGIGIDGYD
                     VPALSPSSKDIIEEGMVLCVETPYYELGLWGLQVEDMLVVQRNGVESLMSTDGCLLTV
                     TE"
     gene            17077..>18116
                     /locus_tag="VLJ17_11985"
     CDS             17077..>18116
                     /locus_tag="VLJ17_11985"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSV23735.1"
                     /translation="MLAAINRRHVLGALGASATMAGLGTFDIASAAGSLVVVTYGGRY
                     ERFWRETLLPTFQQKTGTQTVLDIGVAATFAVNLRATGPDRPVYSYLMANEVVGAVLR
                     DEGFFEAWPASKVPNLAKVHPKANPDNQGVTVMFSPVGIAYRSDLVKAPPRSWKDLWD
                     MPELKGKVGLYQIDNTAGYSFLMMTSKVYGSGPFDFDSGFRRIERLKPFPQAALAGAM
                     AVLLSRGEILAGPLDIGEALSLKKKGLPIAWAAPSEGMFMFDQTFNLLKNGPNKDAAC
                     AFLDYMLSEDVQTKLALEFQGVPVNKNVTLPPATAEEQPLGVNDLDKITAFDWAAANK
                     LRDAVTERWNRVT"
BASE COUNT         3920 a         5259 c         5213 g         3724 t
ORIGIN      
        1 taactccttg tcatcgaaaa atcatatttt ggcggttgag ttaaaatagt aattcaacaa
       61 agggcgcgat atcatttgga cgcggccgac gaggttgcga tccatggagt tcgcgccgag
      121 ctgatggggg cacgtcacga aatcctggat gacggtctgt ggtccgcgtc cgaccgtcat
      181 aggagatgga catgcagact tgccgagtca tcgaacgatc cgatcaggca cgatctctgc
      241 ccgtgctggt cgaacctctc gtgctcggtg cgggtgacga cgagttcggc tatgttgcat
      301 gtggggcgct cacgtatgtc cacaccgctc gcattgaccg gctctcagca tcgagatcat
      361 tcaattgcgg ttcatgcgcc gcggctcaag gtggctcgca tcggattttc acattgcaat
      421 caccgccgtc ggcatgacag cacctcgtac cgtgtcgttg aaggagggga cagggaggcg
      481 acgaaacggt tctccggtga gaagacgaaa aggtgtcgcc cgtgacccaa ttgagggacg
      541 agagttcgga tcacgccagc gtatacgagc ggctcaaggc gctgaccgtc aactatcgct
      601 ttcgcccaca cgagcagctc ctgattgggg agctggcgga acagctgcac gtcagcccga
      661 cgccggtccg cgaagcctta atccgattgc aaggcgaggc cttgctcgac gtgacgccgc
      721 ggcgcggctt ctttgccaag acgctcaacc tgaaggagat gattgatctc gttcggttcc
      781 aattcgttat tctcagcagc tccgtcgaac acgccgtata tacgctcgac ggcgcggtag
      841 aagaaatctg ttcgctggtg ccgacggccg atggcgagag cgatatttca tcaatgatcg
      901 acgcggtgag cgaacgatcg ctcgaccagc tagaggacga tgttcgttgg gtcgagcaag
      961 tgtcagcccg catcgcggcc ctgtcggaaa acgacgttat gatgagtgca ctcgacaatg
     1021 taaacgaccg cacgcattac gtgcgcatga tcgacctgtc agatcccgag cgctccggcg
     1081 aggttcgaag gagcttcgag gcattctcct tcgcactgca gagaaaggag acgccggctg
     1141 ccctcgccat tctgaaaaga gagttggatg tgcagattga caggatgccg accctggtca
     1201 gggagggcat caaccgcgca tacacttctt tatgctaacg aagcttgccc ttagaccaac
     1261 aagaaatatt tgtcgcgaag ccttgacaca ttcgtgccta gtagcgtttc ccatgaggtc
     1321 taatgcggtg actctagcgc gtcataccgc attggcgtca ctccgacgcg ctgcaaagcg
     1381 gcgagccgca gtctataacc tcttaccgcg agggttatgg attacgactc catcctgcgc
     1441 tcgagaccaa aagataatat atatttttct aaatgacaat atatatatga atatttctat
     1501 atatatatct tgcctcccgg ccattatatt cagatattca tctgactagg ctcaccgagg
     1561 aattgtgctg gcgtgcgcgc accgcgtcgc gctcgcgtgt tcaatgaaag cggtcgacga
     1621 gggccccatc aagacgcggc accgggatgc gacactcgcc tgctttcagt tttgctccgt
     1681 tggatggtcc gagaccatta gacagcattg gcgcgttgcg cctctcggat cgagttcggt
     1741 gattctcaag tttcttgatt tcagatgaat cgtgctgcca tccgcgtgca gggaaatacg
     1801 cgctgttata aggagtgttt gctgtgctcg ctacatgtcg aactaccaca catgatttgt
     1861 cgtctcagcc attcgaggtt gccaagccga ttgtgctgct ggccggcgag gagagcttcg
     1921 tcggtcttct caagtatgtc cttgagcttg acgactttgc ctgtcactac accaaggacg
     1981 gcaatggcgt tgccagtttg gccgaaaagt gcaggcccga tcttatcgca cttgactcga
     2041 ccctcggcca aggcgccgcg ctcgccagac agcaactctc cggcaatccc cgcacccgag
     2101 acattccggt catcattatg atttcggccg ccgaggatat cgagcagctc aagatacgca
     2161 gtctggatcc gaccgattat cttctaaagc cattcgtccc cggcaaactc attgcgaggt
     2221 tccgcagcat actacggcca ccgcaaacgg tcggccccaa tggcactatc agcttttacg
     2281 atattcggat ggatgtgaaa gctcatcgac tttttcgcaa caagcgagag attcatgtcg
     2341 gtcccctaga atttcgactc ttgcagcatc tcatgaatca tcctgcccag gtcttctcac
     2401 gtcgacaact cctgcagtgc gtgtgggcca aagacataca tgtcatcctt cgtaccgtcg
     2461 atgtgcacgt gagtcgcctt cgtaaagcac tcaacgacgg taacgagcca aactacattc
     2521 gaacggttcg agcgatcgga tattcgttgg acgcttagcc agtttcgaag cctttcgagt
     2581 gacggcgaac gcaggccggc tgcacgaatt ccgatcaatg atgaaacgag tcaacccggt
     2641 cgatagtgcg atgggccgga gggaacatta tgtctcctga tctcctgctc tggctcgcct
     2701 ttgcgctgaa gatcattgca accacggtct ttgtggtcgc gcgctcactg attaccgagc
     2761 gggctggcgc gctcgttggt gcgctcgtgg ttactctgcc ggcttcggcg ggtcccgcct
     2821 acgtcctcct ggcaatggat tatgaggcat agcagcggcc gcgattggag gcttggtcat
     2881 ggccgcggtc aacactgtgt tttgcttggt ttatgctgca gccgcacagc ggcatggaat
     2941 cgttgctagc ttcgcagcag cttttaccac atggattgta ttggcgcttc tcgccggatc
     3001 gttgatctgg acatttgctg acgtcatcat gcttagcctc gtgacgtttg gcgtgtgcgt
     3061 gccattagcc gagcgctttt gccgtgacac gacaccctcg agggaagcat tgttggtacg
     3121 acgtcccggt gcgcgctttg ctggtcttaa cccttgtggc cgcggttggc ggcatgagcg
     3181 ggaaggtcgg gccggtactc tccggcagtc tcgccctgtt cccgattgcg ctgtcgagca
     3241 cgggcctcat cttgcatcgt cgcatcggtg gtccggcaac ggctgcagtg atggcgtccg
     3301 ccggctttgc aaccgggttg gcattactac acctgacagc tgctgctggg cacagcggca
     3361 gcactctgcc tcacattgct ggtgagcgtt ggatggaata tggccttgtg gggcatgcga
     3421 cgccgcgggg caacgccagg gcgcctgatc gtggcagacc gcgacctacc gtgaactgat
     3481 cggcattgcc gaggaggtga cgagcgccag aaccgcgctt gataaaccca gcaaattgcg
     3541 cggcaaccgc cgccatgacg attgaggccc ttcgcggcca catcgcgcag gccgccaggc
     3601 actcaggcga gagttcgttg ccagctcgcg tcaagcgtca caaattggcc acccaatctg
     3661 gctgcggcat cggcaacggc gtacatcacg cgtgagattt gctcgatact ctcgctgcct
     3721 ttgggaatca agtagccata ggttagacgc aggttggtcg acaagcgctt gacggaaaca
     3781 cctttcgaac gaaaggacgc cgcgacgatg ggatccgcaa tggtgacccc aagaccgcga
     3841 gcgacgaact cgcaagccgc cgcccccgaa gctgcctcaa ggaccggatt gatcgacacg
     3901 ccggcctgcg ccgctgcaag gtcaatctgt gcgcgaagga gcgtgctcgg tcgcaatgcc
     3961 acgaaccgct catgacgcag atccggaatg ccaatggtct cgtgtgccgt caatgcatgt
     4021 ccgggcggta ggacaaggac aacctccgcc tcggcaaaga tgaggcgatc catatcagtc
     4081 tgcgagaacg gcaaggcaac gaccgcaagg tcggcgttgc tgtgggacat ccataagcct
     4141 agaccgcgga cgcaaatgtc gaccgcatat ttcaggtccc atttctggct caacgcatga
     4201 atagcctccg gcaacaacgt gtggagtagg aacggctccg ccgcaataac gagcggtctc
     4261 ccccgcttgt gcttgatgtc ctcagctacg tttcgcacgc cgtcgagccc gaaaagaagc
     4321 ggctcgatgt attgaaagaa ttggagcccc tcctcggttg ggataagtcg gcgcccgtcc
     4381 ctgctgaaga gccgtagctc caatgatccc tccaagctcg agatcatcct gctgacttgt
     4441 ggttgggtgc gcagcatcac ggctgcggcg ccggtgacgg tcccggtctg cataacagct
     4501 cgaaacgctc tcagccagtc aagccgcatg cctcgtgccc tttcgcgacc gaggtctaaa
     4561 agcgaaccgc ccgcaaaccg taaatgcggt caatcgccaa gacaatcacc attgtcaccc
     4621 cgacggaaat cgtcgaggcc gccgctgccg ttggatcgaa atcatagcgc aggtaatcga
     4681 agagctgaat cggaagagtg ctggtcccga tcgccttcaa gagcagggaa atattgacat
     4741 tgtcgaagga catgatgaaa gcgaacattg cgccggtcac aattccagat ttgatgagtg
     4801 gaaaggtcac gcgtcggaat gccttccaag aacttgctcc aagtgtacgc gctgcctcct
     4861 cgactgccac cggcaaattg tacaacgccg agctgacggt caggaatacg aatggcaggg
     4921 tgatgacgat gtgcccgaga atcagcggca aaggcgtttg cgtgccaata aacacctggt
     4981 tgaagaagaa cagcagcgcg atggcagtca atacctcggg caggagcatt ggggccagca
     5041 tggcaagccg gaactcgtcc tggcgacggc gcaggaaccg gacatagaag atcgcggctg
     5101 gagtgccgat gagggtggcc gccgctgcgg ccaccaggcc cacgacgatc gagacgaaaa
     5161 atgcgcttgt gaatgatggc gaactgagga aagcccaata ccagcgaaac gagagcccgg
     5221 ttgggggaaa cgagagatac tcggctgcat tgaacgatgc gaggacgacg attgcgatcg
     5281 gcagcagcag aaagagataa acagccgcga ccgaaatcaa caaggcggcc gatgcgatct
     5341 tcatgcgagc cttcgcattc gtctacgccc caacaaggca aaagcccaga ctgacgcaag
     5401 aaccgcagcg gagaagacta aggccaacgc ggcaccgaac ggccatagca agccgcccat
     5461 aagctgttgg accataacgg tcggcagtgt ctgcacgcgc ccgcctccga gaagcatcgg
     5521 gattacgtag gcgctggcag caagaacgaa aaccagaatg actcccgact ggagtccagg
     5581 ccatatcaac ggcagcgcaa tacgctggaa cacacgcatg cgcgatgctc cgagcgtacg
     5641 ggccgcctcc tccaaatggg gatcaatcga ttgtatcgcg ttcatgagcg ggagaatcat
     5701 caacggcaag aacacatgga ccaaggctat cgtgacgccg gtcgcgttgt acatgagctg
     5761 gaatggtcca acccccaagg tcccgagcgc ctgattgacc aagccattgt tcgcgagcaa
     5821 aacgatccac ccgaaacatc ggatcacgac gccggtgaga agaggcgaca agacgccagc
     5881 atacagcagg ccgcgccatc gcgacgtcgt tcgggcaagg tggaatgcga ccggaaaggc
     5941 caggacaaga caaacagccg tcgttacgat cgcgaacagg agtgtctcgg cgaggagcga
     6001 gagatacaga gaatcgctca ggatatggac gtagttggca accgtgaagc ccggcccata
     6061 aggggccgtc gtcgaaggcg tccgaaaact cattattcca atgttaatat aggggatcag
     6121 gacgaacagg cccaccaacg atagcgcagg gacggcgaaa agccagcgtc ggaccccgat
     6181 ttcagaggct tgcgtcattc cagcagccaa gccttttcgg gatcgatctg caccgacacc
     6241 acctcacctg cctcgtgaac gatactcccc agagcctgta ccgcaagaat agtgccgtca
     6301 gctgtggcga cccgataatc tacgatgttg ccgagaaagt gccgctccac gatacggccc
     6361 gacaacgcac ttgtgctgca ctctttgaca agccgcatcg cctcgggcct gaccatcgcg
     6421 gtcgcccgcg caccgggttc aatcgcgtgc ttcgtggcgc acaggaggcg gccaacgggg
     6481 gtgtcgaccg ttgcaacgcc attgcattga tggactacct tcccggctat caaattcgct
     6541 tgcccaatga atttggcaac atcggtagtg gccgggcgat catagatgtc ttgaggtgtt
     6601 ccggcctgat ggatgcggcc cgcgaacatg acgacgatcc ggtcagacat ggtcatgctt
     6661 tccgcctgat catgcgtgac gtaaagtgta gtaatgccga ttcgctcctg taaagagcgt
     6721 atgaagaggc gcatttcgtc gcgcagcttg gcgtcaagat tggcaagcgg ttcatccagc
     6781 aacaggactg cgggctcgac aatcagtgcc cttgccaacg cgacacgctg ctgctgtccg
     6841 ccggaaagct gccgtggcca gcgatcctca aaacctgtga gctggaccat gtcgagcacg
     6901 gatgagatcc gcttgccagc ctcactaccg cgcatacctc gcatttccaa tccaaacccg
     6961 atattctcac gaatggtcat atgcgggaaa agagcgtagt tctgaaatac catgccaatg
     7021 aaccgccgtt caggcagcaa gcgcgtgaca tccctgtcgc caaacagaat cttgccggac
     7081 gttggaatct ccaaacccgc aacacagcgc aatgtcgtgg tcttgccgca tccggatgga
     7141 ccgagaagtg aaacgaattc tccttcggca acatcgagat caatatcctg aacggcgact
     7201 gctcccgcgt agcacttcgt cagcgcttga atggagagac ttgacatgcg gccctcaaca
     7261 caactggaaa tgcaactggc caagtgttag ccgaggtcac cttcacggtc cgaacattgt
     7321 tggcccgtat cgtcgtcgct gacgtatccg gccgagcggt cggcagcgcg cgcgaccatg
     7381 catcgctggt gcgggtcgcc atatccaccc ccacccggtg tacggatgat gagacgctcg
     7441 tgcgcctcaa tctggtgggc tccctttgcc gacaaactgc ggccgtcctt gaccctgagc
     7501 tcgccggcag ctcctggccc gccccccgaa cgtccgcggg cggcgtggtc gactcgatcg
     7561 aacgccgcga taaacgtgag cggcgaaatg cctctggtgc cgatctcgat atcctgtccc
     7621 aatccaccgc gagttgtacc ctcgcccccc gaattctggc gcaactcccg ccgccagaat
     7681 accagagggg tcgttgcctc tatgacttcg accggtgttc cgcgcacggc gcttggaaat
     7741 gaagtggccg agagtccgtc gtgcgccggc ctcgcgccgg tgcccccgtt ggttacgatc
     7801 gagacggaaa acggcttgtc cgagtaatcc cctcggaatg tcaaagtcca caatgccgac
     7861 gcactttcgg ccggcacgac gcctggcacg attttgtcga agcaaccaag cacgacgtcc
     7921 ggtaagaggc caccgacaat gtgacgacac gaaaccggtt gcgggtgctc agctttcaat
     7981 atacagccgc tcggcgcggt cacgtcgaat gccgacagcg tgccctcgtt gtttggcaga
     8041 tcgggagcga tagcacaggt gagcgcgtac gacgtatatg cggcggcgta attcagcgga
     8101 acgttgatac cgaatcgcga ggccgccgac gaacccgtcc agtcggccct gatgccaagt
     8161 tgagatatcg tgagcctgac gacgagatct atgggtgttt cgaagccatc gacgaccatc
     8221 cggtgcgtcg cctcgtcatg tggcagcgca gcgatccgtt gcatcatggc gcgacgagag
     8281 ctttcgacga tgtgatcggc cagaacatcg atatcccact gccccatttc gacgagcagc
     8341 tcgcgcaaac ggcgggctcc tatttcgtta gccgcaatga gcgagtagat atccccctcc
     8401 aactcggccg gcattctgga attggccttg gcgatctgga tcaaggtgtg attcgtcgcg
     8461 ccacggtcga cgagtttcat gatcggtatg gcgacgcctt ccatgaacaa atctgacccc
     8521 tccgggctca gcccgatgcc cccgacatcg gtcatatgtc cggtgcaggc gaagaaggcg
     8581 acgagacgcc cgtggtgaaa tgccggcgtg acgacaacat agtcgaagag atgccccgtc
     8641 ccgtgccacg gatcgtttgt gacgtagacg tctccctcat tcatcgtttc ggtagggaac
     8701 accgccagga acgccttgac cgagcgcgcc atcgtattga tgtgtcccgg cgtgccggtt
     8761 acggcttggg cgagcatccg gccggatgtg tcgaagatgc cagcggaaag atccccggat
     8821 tcacgaacaa tcgggctgaa tgccgttcgt atcaacgtct gcgcttgctc ttcgacgagc
     8881 gccatcacgc gtgtccacat gacttgaaac cgaacagcag acgagaatac cggtcgcaca
     8941 ttcatcggct cactcccggt gttgcgactc tctccagaat caagtgtcca atcgcatcaa
     9001 cgcggacgtt gaacgcggcg gtgacgaccg tcgtcgtgtc atcctcgacg atgagcgcgg
     9061 gcccgttgac ttcgctgccc gggccgagcg cattccgttc gtagacgctg taaggctcga
     9121 attttcccgt cagaggatcg aaaacttcgc gtctgtggcg agattgactt gcgacaacag
     9181 gtaaagtctt tggctttcgc gtatggggac gccacgtttc ttgcgatagg cgcatctgcc
     9241 aggagagcac ttctactgac gctccatgga ttacacgtcc gaacagtgcc gcgtagcgct
     9301 gctcaaaggt ctccctcagg cttgcagcac tcggaatgcc cccaccgaaa ggcacggtca
     9361 attcatgtcc ttgaccgacg tatcgcatat cggctgcgtg tgtgatggcc agttcgccga
     9421 ctccggcaag tgtgctcatg acttcggttg ctcgagcctg catggcctgg agaacgtcgg
     9481 caacaactga cggatcgtac gtgtcgagcc gcatgggtcg gctaaccacc acgtcatagg
     9541 caaggggtgt gcgaagaaat cccattgccg agcccacgcc cgccccgttt ggaatgatca
     9601 cccgcgccat gccgagcttt tcggccaaat gggcggcatg aagcggtgcg gcaccaccga
     9661 acgcgatcat cgtgtggtca gagagttccc taccgagttc cgccgcgtga acacgcgcgg
     9721 cattggccat agtctcatcg accatcagcg cggtgcctgc tgcaacctcg agaacttgca
     9781 ggcccatcac ccgaccgatc tcggtgcgga atgtcgcctc ggcgcgccga gggtcgagct
     9841 cgatgcgacc gccagcgaag cgattgggat caatcttgcc aagcaataga tccgcatcgg
     9901 tcacggtcgg ctttctgcca ccgcgcccat agcacgcggg ccctggctct gaccctgcac
     9961 tctgcggccc aacggaaatc cgcatcattg catcgactga ggcaatcgat ccaccgcccg
    10021 ctccaatttc gaccaattgc acaaccggaa ttcgaatcgg gagaccactg cctttcttga
    10081 agcgaccagc acgatcgacc tcgaagaggc gatctacttg cggcttgccg tcagcaatca
    10141 agcaaatctt cgcggtggtc ccgcccatat cgaaggatag aacgcgttgc tcatcaagtt
    10201 cggcggcgat tgaagatgag agcacggcgc cgccggcggg gccggattcg accagcctga
    10261 ttggaacctt cttggcaagc tcgagcggca tcacgccgac gctagaggtc ataaggaaag
    10321 cggggcagcg cagtccaagg tcaaatagac gctgcgaaag gcgaacaagg taggcggcaa
    10381 taaggggctg tatgtacgca ttagcgcacg tcgtcgagat ccgctcatat tcgcgaatct
    10441 ccggacacac gtcgctggac aaactgattg aaaggtccgg tgcgagagct tgaagaatgt
    10501 cacggacctt gcgctcatgc gtcggattag cataagcatg aaggaagccg acggcaatgc
    10561 tttcgatccg ctcttgtcga aggctcgccg cgatcgttgc caagcattcc tcgtcgatcg
    10621 gctgaagcac atcgccggcc gccgagattc gttcaacaac ggtgaaacga agttcccgtg
    10681 ggatcagcgg cttctgcttc accaacgcca aatccattgg atcgaaccga ccttcgtatc
    10741 caatctccag gacatcgcga aagccgtgag tggtgatcag tgctgttcga gccccgcggc
    10801 gttcgagaat ggcattggtg gcgagagttg tgccgtggac gaaccaatcg acgtcttcgg
    10861 cggaaacgcc ggattcctgc aatatctccg cgataccgag cagcaacccc tgctcgggca
    10921 ttgcgtgagt ggtcaaaagc ttccgagacc acctctgagg cccgtgctcg agaacgacgt
    10981 ctgtgaaggt tcccccaatg tcggcagaca gccgagcgcc gcgctgctcc gtggacgagg
    11041 ctgaaatcat gtcggttcga ttcacggaac gtccgcagtg caccagtgcc tgacacagat
    11101 tacgaaattg cagctctgtt acataaatgt aaaattttgc ggatcttatg cggcggatgc
    11161 atgcaggctg cgggcaaaat catcctgtcg gctatattgc actgcaactt tgcgagagac
    11221 tgggcgccgt cctcgttgcg cgacggcaat tcgggctccg ccgttcgaaa tcatgccttt
    11281 tttacatagc aattgcctaa gaacgaattt gcgaggtccc ggcataacga attaacgtca
    11341 ctggcatttc gcagagccgg gagaggacga cgtgggtggt attgcggcac tttcaagacc
    11401 cgggacaacc actggtgtcg cccccgcgga agaggacatc aaaccgctcg acattgcatc
    11461 cgttgccagg gaatttccga tcaaggcgaa gcggtcctac ctgaacaatg cgtcgattgg
    11521 cccactttca aatccggtga ttgccgcaat ggaggtcttt ctgcacgatg ttagggaccg
    11581 cggccgcaac aattatccga attggtgcag ttacgccgac aacaagatca agggccgaat
    11641 cgctcggctc atcggcgctc gcacaaatga gatcgctttc gtcaagaata cgaccgaagg
    11701 cctagttacg gtggcgaatg gtcttgattg gcgcgacgga gacaatgtca ttattgccga
    11761 catcgaatac ccgtccaatg tgtactgctg gatgcggctc gcgaagcgcg gtgtttcgat
    11821 ccggtgggtc aagagcgagg gcgggcgcgt gaccgtcgac gcccttgccg aggcgatcga
    11881 ttcgaagacg cggctgatct cgctgagcgc agtccagttt tccaacggat accggcagga
    11941 cctggccctt acatcggaac tctgcgcaaa gcgtggagtc cagctcaatc tcgatgccat
    12001 tcaatgggtg ggcgcgctgg agatggatgt cagtcgatat cacatcgact tcatggcggt
    12061 tggcggccaa aagtggctcc ttgcgcctat cggaaccgga ttcttctatt gcaatcagga
    12121 ttctctcgac tgcctcgatc cgcccagtgt cggataccac agcgttgata agggcgaggc
    12181 tcatatggac tatgaacttg cttaccggcc ggatgccgga cggtttgaag aggcccttgt
    12241 taactttcct ggcatttggg gacttgatgc cgccgtcaag attttgctcg ggctcggatc
    12301 acgacacgtc gaacgccatg tgctcgatct caccgagttc gcggctgaga gattaaaacg
    12361 agccggctgc gaggtcgtca gcccgatcgg tgaacgcgag agatccggaa tcttgtcgtt
    12421 ccgtctgccc catgccgatg ctgaaaccgc agccgagcaa ctgcgcgcgc gcggcatcga
    12481 cgtggctgtt cgcggcaacg cgcttcgcat ctctccatcg tactacaacg accgcccgga
    12541 gattgagcac ctggttcaag agttgtcggc tctgcatccg agatgattcg cagcgtgtgc
    12601 aggggctctt gccttcggcg tcagcatgtc attacgggcg ctattcggcg ccggccgttg
    12661 tcccgagggc tgccgacccc tctgcttggg acaaggcgcg ccccaccgtg cagacagcat
    12721 ggtcccgcgc ccaccgggcg acgtcccggt gggtggcgaa ccatacgtcg gggcgcgcgc
    12781 gggcgtgccg aatgatctct tctaaaatcc agatgcggga acggtagccg atcacgtggg
    12841 gatgcatcgt gagttgaaag agaccggcct cgtcataggc agcatcgaat tcacgccgaa
    12901 agatgtcgaa cacatcagag ggtgaaagtt gaggtcgcgt cccggacgtg cgattgtacc
    12961 aaagataggc agcatcatcc cgtatccact cgacgggaac ctccaaaaca ttgcttggcg
    13021 caccgtcgag cagcagttca tagcaatcat cgtcggccat caacgaggaa tcataaagca
    13081 gttcgatttc ctttgcgatt accaacgtct gggagctgaa atcccaagag ggtgtgcgca
    13141 ttccgacggg ccgcactcca gttacggcct ccacggtctc ggcagcacgc agggcgagtt
    13201 cgcgctccgc acccgccggc agtgtcgaat tgttctcatg gatccagccg tgcagaccga
    13261 tttcgtgtcc ttcggcgatc acacctcgtt gctcttcgac gtgaagtcgc gcgacaactg
    13321 caggcacgaa gaaggtcgcc ggcacggcgt agcgcgcgag caccttaagt atgcggggca
    13381 tggcggcccg gctgccatag tgcccccaag atagaccgcc gatcgactgc cctccgttcc
    13441 tcaactcgct gctttcgtgg tcggaatcaa aggacagggc aatcgcgcaa cgcgcgccgc
    13501 ctttccatgc gctcggacgc aacctacgac cggcgcggac tcggttgatg atctgacgcc
    13561 aatggccttc cggccattcc catggttgcg acagtttcgg acttgcacgg ttcattcttc
    13621 gcgctccttt cttacggtta gacgcgacat ttcccctgca gatctcgcct tggctgcctc
    13681 gatggcaacc accgttaatg ttgcgatata atatcatgaa ttacattcac gaaatgtaat
    13741 ttgaaaatgt atatatcatg aataaatatt atgtaatata tttctaaata tattgttagt
    13801 tatatatgtt aaaccttctt agcaatttga tgaagttaac atgtaaagac attgccccat
    13861 cgaacgacgt tcctacctgc gttgcagacg ccggtgattg cggcggcgat ctagccttgg
    13921 caggcactgc ctgaggcatt gccgagcaca tcactcgcta ctcgcgatca cacgcggcaa
    13981 cccattattg acggctcgga ggacattgcg atgcccatct tccacgacac gtcagagatc
    14041 gtcacggatg acatcattct tgatatttct gacaagctaa cggccaacgg aaacgatatt
    14101 ttcctgaaat tggaggctct caatccctgt ggctcaatca agctgaaaac agcgcgctat
    14161 ctggtggacg cggttctgaa ggattgctct aagaaaactc ctcggctgat cgaatcgtct
    14221 tcgggcaatc tcggggtcgc gcttgcaagc atctgcgccg agcggagcct tccgttcgag
    14281 tgcgtcgtcg acaagaacac gctgaaggac aagaaagacc atatcgcaag tcttgggggc
    14341 cgcgtcacgg ttataacaga gccggatgag aacggcggct atttgggttc gcgtctgcaa
    14401 tacatcaagg atcgtttagc acgcgacccc gatctggtct ggacgaatca gtatggaaac
    14461 gaagccaata ttctcgccca ttacagtacg accgcgccct gtttgctgcg cgcgattggt
    14521 tccatcagct atcttttcgt cggcgccggt agcactggaa ccttgctcgg atgcgtcaga
    14581 tacttccatg agcactcgcc gggcacgcat atcatagcgg ttgacgctcg cggctcagtg
    14641 actttcgggg gacgacccgg caagcgccac attcccggta ttggcaccag taagcgtcct
    14701 gaaatgctgg atcaatccaa cctatatccg catgagatcg tctatatcga ggagcgcgac
    14761 gcgattgacc aatgccgacg attcagccga cgaagtggga ttctgatcgg cggctcgact
    14821 ggcagcgtgt tggctgcaac ggagcaatat atcagaaggc acggcctttc gggtcacgtc
    14881 atcgcgttga tctcgcccga cctcggcagt tcgtacctgc ccacgatcta caacgatcga
    14941 tgggtgcatg agcactttcc agaggctcat gcgccggacg agctagagct cttggccgga
    15001 ctccgggcgt agcgccaacg ggcgcgcaga ccgcctgagc ctcctttttt acccgcccgt
    15061 tgatcaggca gatatccagc gtctgcacgc agaaaggcca tcatggattg ccggttcatc
    15121 aaacctcagc agctaaaacc gactgaagag cacgatcccc aagcggtatc ggcgcttgcg
    15181 gccaagatcg cccgcgacgg tgtttggcgt gcgccggttc tcgttcaccg tggcaacctc
    15241 gccatccttg acggccacca tcggcggcaa gccgcgattg acatgcacct gtgcgtgata
    15301 ccgtgcttcg tctgttcgta tgcctacgac aatattcagc ttgacacatg gcgcccggac
    15361 tatcgcccga cagcaagtga cgtgtttcgc gctgcatcga caggccatct atttccgcgc
    15421 aagacaaccc gccatcgttt cccgcaactt ggtctgcatt ttgcaatacc gctcgatctt
    15481 ctgatggagc atgggaaatc ggcggttgac aagcacctcc tggcccgcct gaacgcccgt
    15541 cttgcagtgg cgttgtcgca atgctgacga acgtcaagcg actccatgag ctgatggcgc
    15601 aagccgagct tgacgcggtt gtcgcaacct cgccggaaaa cgttacctac atgagcggat
    15661 tctgggcaat gtctcagtgg gtccgtcggg gacctcaagc ttatatcctg tggccagcac
    15721 catctcgcgg tgaatcatgt ctaattgcga actcgtcggc gcttgatctt gtcgccgacc
    15781 agaagccgtg ggtgcagaac gtccgacgat atgaacattt tgttgtcgac cgggcgcccg
    15841 atgcaatcct caatgacgtc gatcaacgtc aagcggcgtt gtacgaattg ccagatgatg
    15901 gagaccctct caatgcgctg tgcatggcga ttcacgagaa tgccctggat cgcggccgca
    15961 tagcggtcga tgagcgtggg ctgcttccag ggtatttcga tgccttgcag gggcgactcc
    16021 cggcctgcac tctggttcat ggatttgaat tgcttcgtcg ttgccgatcg ctgaagacaa
    16081 aagaggaaat cgtgcggctt cggcgtgccg cggagatcgc ggagcactcc attgctgctg
    16141 ctcttcgcgt cgcccgtgcg ggagcctcgg agatcgatct ggcgcgcgca ttccatgagc
    16201 agacaatacg cgaaggcgca tttccggtct tgggctgcat tggatttgga tcgcgcagcg
    16261 cgatggtcaa tgtgcagccg tcagatcgta agcttcaacc caacgacgtc atccgatttg
    16321 acgtcggagg ccgatatcag cactatcgcg cagatattgc ccgcatcgct gtccgcggga
    16381 agccgtcgaa aaagctaacg acgtactacc atgcgctgca catgggcgtg cgttgcgcct
    16441 atgacgtcgt gcgccccggc gcggcggcat ccgatatctt ccttgcggtg gtcaatgctg
    16501 tacgttccaa cggcctgccg cattaccagc gcacccatgt ggggcatggt attggcatcg
    16561 acggatatga tgttccggcg ctgagcccgt cgagcaaaga tatcatcgaa gaaggcatgg
    16621 ttctgtgcgt cgaaactccc tattacgaac tcgggctatg ggggcttcag gttgaggaca
    16681 tgctcgtggt tcagcgcaat ggggttgaat ctctcatgtc caccgacgga tgcctgctga
    16741 ccgtcacgga gtaaccgatc attagcggcc gagatcttaa gcatcagccg ccgctttgcg
    16801 ccggcccgcc tagcgatggt gtgatttgct atggtaggaa cgcgcgacca tgcgcgacgc
    16861 gcataagatc ggttcgattt tacatttctg gccgatcgcc ggccattcta agctgatctt
    16921 caaccgattg agccggaagc gcagtcatta gtgcgatgat ttgtgccgct tcttggcgcc
    16981 ggagtattgc tgcagcactt ccgacggttt gacccggcat atgccggcaa ggcgcgctac
    17041 ggccggctca cgtacgacga gtaggagaac agcgacatgc ttgcggctat caacagacgc
    17101 catgtactcg gcgctctcgg tgcgagcgcc accatggcgg ggttggggac gttcgacatc
    17161 gcatccgcag ccggcagtct ggtggtcgtt acctatggcg ggcgctacga acgattttgg
    17221 cgcgaaacgc tgcttccgac gttccaacaa aagaccggaa cgcaaacggt gctcgacatc
    17281 ggagtggctg cgaccttcgc cgtgaacttg cgtgcaaccg gcccggacag gccggtctat
    17341 tcttacctca tggcgaatga ggttgttggc gcggtcttgc gggatgaagg atttttcgag
    17401 gcctggccgg ccagcaaggt acctaacctc gcaaaggtgc atcccaaggc caatcctgac
    17461 aaccaaggcg tgactgtgat gttttctccg gtcggcatcg cctatcgctc ggatctggtg
    17521 aaggctccgc cgcgctcgtg gaaggacctg tgggacatgc cggagctcaa aggcaaggtc
    17581 ggcctgtacc agatcgacaa tacggccggt tacagtttcc tgatgatgac atcgaaggtt
    17641 tacgggagcg ggccgtttga tttcgatagc ggcttccgcc ggatcgagcg cttgaagccg
    17701 tttccgcagg ctgcgctcgc cggcgcaatg gccgtgctct taagccgagg agaaattctc
    17761 gccggtccgc tcgacatcgg cgaagcactc agcctgaaga agaaaggcct gccgatcgcc
    17821 tgggcggctc catcggaagg catgttcatg tttgatcaga cattcaactt gctcaagaac
    17881 ggaccgaaca aggacgcggc gtgtgctttc cttgattaca tgctctccga agacgtgcag
    17941 accaaattgg cgctggaatt ccagggcgtg ccagtcaaca aaaatgtgac gctgccgccg
    18001 gctacagccg aagagcaacc gctcggtgtc aacgatctcg acaagatcac ggcgttcgac
    18061 tgggcggctg cgaacaagct gcgtgatgcc gttaccgaac gttggaatcg cgtgac
//
LOCUS       DATILV010000525         4344 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4978584, whole genome shotgun sequence.
ACCESSION   DATILV010000525 DATILV010000000
VERSION     DATILV010000525.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4344
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4978584"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            762..1076
                     /locus_tag="VLJ17_11990"
     CDS             762..1076
                     /locus_tag="VLJ17_11990"
                     /inference="COORDINATES: protein motif:HMM:TIGR00413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HSV23736.1"
                     /translation="MKGYASVYSSRRTASGERTNAGAMTAAHRTLPFGTSVIVVNNRN
                     GRSVMVRINDRGPFVRGRVIDLSPAAARAIGVSGLTPVSLTVGVAGGAAPGGDVDKTP
                     AQ"
     gene            1341..1685
                     /locus_tag="VLJ17_11995"
     CDS             1341..1685
                     /locus_tag="VLJ17_11995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23737.1"
                     /translation="MELLSVVAEVIRDLLIFVAALMTLLIVLVVVVLSMPDDNPFKRL
                     LTALTYRVGATAAAGALAIPIEPIPGIDALYDLAVPILLIWYWFTFFRDTAHLPNAPS
                     PQGSRRISRNGR"
     gene            complement(1934..2224)
                     /locus_tag="VLJ17_12000"
                     /pseudo
     CDS             complement(1934..2224)
                     /locus_tag="VLJ17_12000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003615965.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            2526..3197
                     /locus_tag="VLJ17_12005"
     CDS             2526..3197
                     /locus_tag="VLJ17_12005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013895617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSV23738.1"
                     /translation="MRDAPRKNPRNYRKEEWIAHDVDPREVDAIARQHARGRFFVCAM
                     IAEGEPDESTRTAYKALGYRLLATEGFFVQRMKRIPRPRSAVSIQRVRTPDLAAQLGK
                     ITRTRPISNDLLGDNAPFRQYVALDGDDIVGRVRSVDAVGATWCADMYVRPSHRRRGI
                     GQALLSKMLQDDRARGSKCSVLTASHTGALLYPRVGYERIGTLFMFATRREASDRRAA
                     RTKRS"
     gene            complement(3458..3586)
                     /locus_tag="VLJ17_12010"
                     /pseudo
     CDS             complement(3458..3586)
                     /locus_tag="VLJ17_12010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273947.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            3895..>4344
                     /locus_tag="VLJ17_12015"
     CDS             3895..>4344
                     /locus_tag="VLJ17_12015"
                     /inference="COORDINATES: protein motif:HMM:NF014336.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S1/P1 nuclease"
                     /protein_id="HSV23739.1"
                     /translation="MKMIVAGTLTLALATNFVQPRPALAWGDDGHKVVALIAQSFLET
                     DVRKRLNALLAADTDSLTPHDIAAAATWADKFRDANINGSRLKTRQWHFVDIEINAPD
                     LDQACFNQPAIPAGTTASDGPADDCVVDKIQEFAAEIADPGTDLEEQV"
BASE COUNT          882 a         1270 c         1303 g          889 t
ORIGIN      
        1 cgccgactca gtcatttcgc ttgctgtcgc ctccgcctgc gaaacagtgg cctgccctcg
       61 gcccagggcg tcctctactg tgtctttaac agactcgatg gcgttgcgcg ccgagtcgcc
      121 caggatgttc gacgaatgag cggattttaa agaataaggc ttgggggcgg tgttcataaa
      181 gagttactcc aaaaatgaac ggtatagggg caacggcggc cgacgccatc ggttccgccg
      241 cggggccgtt ggcaattatt tcaagttctc cacgacaccg catgtcaaca ccgccgaacc
      301 ttcagttgat catgtgccgt tcagcatgcg caatccggaa ataatgatcc agagcgcacc
      361 aaaggaaatg ccgaggatcc gagcgaatcg tgccctcatc catctacacc tgactgctcc
      421 ctcattaggc tactcaaagg gaacctttga tcccagagga cgtttactct cggccaattg
      481 caggacgttg aaacagcggg aactctgcgt tgacatactt gcatgcacgg gagcgctgca
      541 gtctcctgcg attcgccaca ctgaccggcg cttttgcatg cgtgttgaca gcaattcagg
      601 acatcaggcc gtcctcggcc cactctgact cggcccatgc caagcgtggc cgaggccatt
      661 cacagcacgc cggcgaagtc gtcttgcacg tgcgccctca gcaacggtta gaggacaacg
      721 aagcaacccc tcccccgatt attggcattt tccaacgatt gatgaaaggt tacgcctcgg
      781 tttacagcag ccgccgaacc gcaagcggtg agcgcacgaa tgcaggcgcc atgaccgccg
      841 cccaccgcac gctgccattc ggtactagcg taatcgtcgt caataatcgc aacggtcgct
      901 cggtgatggt gcgtatcaac gatcgcggtc cgttcgtgcg gggacgagtc atcgatctca
      961 gtccagcggc ggcgcgggca atcggagtga gcggtcttac gccggtgtcg ttgaccgtcg
     1021 gagtggcagg tggcgcggcg cctggcggag acgtcgataa gactccggca caatagacgg
     1081 ctaactcaag gcgatgacct cgggcgcaat actgcggccc ctatccctgc gcggatcggc
     1141 gcaagcagag cgcccgtcga cctttacagc tggccgaatg aagcagagga cgcgcaacgc
     1201 gcggcgccga acgcgggggc gccgttcgcc gtcgccggca acttgcgata tcatttgaat
     1261 ggttgattgc cgcgagacgt actggagcgc cgcaggtgct gaacagctga ggcactggca
     1321 acgatcggag gaccgagaag atggaactgc tatcagtagt cgccgaagtc atccgcgacc
     1381 tccttatctt cgttgccgcg ttgatgacat tgcttatcgt cctcgtcgtt gtcgttttga
     1441 gcatgcccga cgacaatccg ttcaagcgcc tgctcactgc gctgacttac cgggttgggg
     1501 cgaccgcggc ggctggcgct ctagccattc cgatcgagcc tatccccggc atcgatgcgc
     1561 tctatgatct tgcggtcccg attctgctaa tctggtattg gttcacgttc tttcgggaca
     1621 cggcccactt gcccaatgcg ccctcgccgc agggctcacg gcggatcagt cgtaacggcc
     1681 gatgaggatg cgcggttttc gccgccttcg gcgtcctcgg cgggggcatc cggcgcgatc
     1741 tcagccggca atccgcttcc agcatgacca cgaccggtgg ggcgccagct cggcccgggc
     1801 atttgcctat tcgttgtttg agtaatcgcc gcgaacgttc aatggcccgt tgactatctg
     1861 gtatctgctc aatcagcttt tggcattcgc cccgaagcaa tcccaatttc tccgcatcta
     1921 gagcggattc ctgttaatcc aagccatacc cgacgtggcc gaagaaattg gcacattctt
     1981 ggggtttgga ttgttgtaac gcatgagcgg ctgccgtctc gacgaacatt cgcgcagcgg
     2041 cctttcgcac gaacgccttg aacttggcaa aggcgttctc gatcgggttg aagtcgggac
     2101 tatagggcgg caggtagaga agcttggcgc cgtgcgcctc aatggcttgc ctgacgccgc
     2161 tgactttatg ggcgggcaaa ttatccataa cgacgatatg gccgggctgc aaagtcggcg
     2221 cgagcatcca cacttcccgc gacttcgtgc cttggcgctt tttggacgcc ggccgcctga
     2281 gtgcggacag cttctctcac tgccggcgtc caaaaacctg cacaactccg ggcgttatac
     2341 aaaccagatg gcgcggctac cgcagccaga gtgttgtttt gagcaggcag gcaacgtagt
     2401 ctgcggaggt gaagagatcg taccggggga ttgagcttgc gattgaggtg ttcgtgcgcg
     2461 ggcacagcgc cggtaggagc cgtacctttc cttacgaagt cagtcgcgtt ggaccattgt
     2521 ggttgatgcg ggatgcgccg cgcaagaatc ctcgcaatta ccgcaaggag gagtggatag
     2581 cgcatgacgt cgaccccagg gaggtggatg cgattgctcg acagcacgcg cgagggcgct
     2641 tctttgtatg cgcaatgatc gccgaaggcg aaccggacga gtcgacgcga actgcataca
     2701 aggctctcgg ttatcggctg ctcgcgacag aaggtttctt tgtacagcgg atgaaacgga
     2761 ttccaaggcc gcgatctgcc gtttcgattc aacgcgtgcg cacacctgac ttagcggcgc
     2821 agttggggaa gatcactcgt actcggccga tttcaaacga tttgctcgga gataacgctc
     2881 cgttccgcca atacgtggca ctcgatggag acgatattgt tgggcgcgtg cgcagcgtgg
     2941 atgctgtggg agctacgtgg tgcgcggaca tgtatgttcg cccttcgcac cggcgtcgcg
     3001 gcattggtca ggcgctgctg tcaaaaatgt tgcaggacga ccgggcccgt gggtcgaagt
     3061 gttctgtgct gaccgcgagt cacacagggg cgctcttgta tccccgcgtg ggttatgagc
     3121 ggattgggac gctgttcatg tttgcaacaa ggagggaagc gtctgatagg cgagcagcgc
     3181 gcaccaaacg cagctgatga agcgtcctct agctaagacc ggagtggggc caagcttcgg
     3241 tggtcgccag catcgctcat accggctctg cggtcggggc ggaagaaagc ctgcggcgcg
     3301 gtcgaacaaa agaaagggcc aaagcaagaa agcgagcaaa aaacttcttg cattagcggc
     3361 ggcgattaga gaacggaaga acgctggcag cgcggtcgaa caaaagaact tgagagaagt
     3421 ttccaagcgt cttgctcgcc acaaaaaaaa gagctttgtc catctcatcc gtggtgcgca
     3481 agtgcttcca gtgctcggct gggaagtcgt agaaagtcag caacgcatcg cgatccttgt
     3541 tcaggcactc ggccgccttg tcgtatttca cccggtagct ctcgatgagg tcgcaacctt
     3601 agcatcagcc ttggtctcag ccatctcgac cttctgcaag gcggcgtttg gccttcggtg
     3661 ctggctcttg tgtatgtaaa gagcgaggcg atcgacgccc gtagggtcac gttcgcgcat
     3721 ggcgagggtc cctgtcacag cctgcgcgga ggtgtcagcg tgtcccgctg tcgcaagagc
     3781 catctctccg gattggttga tccggcccct ttttcaatcg ctatgtgagg tccgtcacat
     3841 tgaaggtggc aaagatttgc gattgtgcga tacccacaac catagggggt taacatgaag
     3901 atgatcgttg ccgggacgct tacgcttgcg ctcgccacca acttcgttca accgcgccca
     3961 gcgctcgcgt ggggcgacga cgggcacaag gtggtggccc tcatcgctca atcctttctg
     4021 gaaactgacg tccgcaaacg actcaacgcc ttactcgcgg ccgacactga ttccctgacg
     4081 ccgcacgaca tcgccgccgc ggcgacctgg gccgacaagt tccgagacgc caacatcaac
     4141 ggctcacgac tgaagacgcg acaatggcac ttcgtcgaca tagagatcaa tgctccagac
     4201 ctcgaccagg cgtgcttcaa tcagccggcc attccggccg gcaccacggc ctcagacggc
     4261 ccggccgacg attgcgtcgt cgacaagatt caggagttcg ccgcagaaat cgccgaccct
     4321 gggactgacc tcgaggagca ggtc
//
LOCUS       DATILV010000526         3121 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3702553, whole genome shotgun sequence.
ACCESSION   DATILV010000526 DATILV010000000
VERSION     DATILV010000526.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3121)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3121)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3121
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3702553"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..324
                     /locus_tag="VLJ17_12020"
     CDS             <1..324
                     /locus_tag="VLJ17_12020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSV23740.1"
                     /translation="LMRFKDSPEPHAPGMLPPGAENKVMHASLRIGDSTVMASDGQCL
                     GRPNFQGFALSLPVSNDAEAERLFAALGDGGKVCMPLAKTFFSSRFGMVADRFGVSWM
                     IIVAQ"
     gene            351..710
                     /locus_tag="VLJ17_12025"
     CDS             351..710
                     /locus_tag="VLJ17_12025"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HSV23741.1"
                     /translation="MKYLCLGYHEEKTWRAMNEGDRKALLEESFAYAALLRKNGHYID
                     GKALQDAGTATTLRFDKGKVAITDGPFAETKEQLGGVMVLEAKDLNHAIQLMSQLPCM
                     RVGGCLEIRPINEEIIG"
     gene            733..1092
                     /locus_tag="VLJ17_12030"
     CDS             733..1092
                     /locus_tag="VLJ17_12030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010912295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HSV23742.1"
                     /translation="MKYMLLIYFDEQAALSETERQECYAESTQLAQQLHSSGQYLGAN
                     PLHSASMATSVRVRNGKRLVTDGPFAETREQLGGYFLIEANNLDEAIGIAARIPMARK
                     GTVEVRPVIDIPGLPTA"
     gene            1206..1571
                     /locus_tag="VLJ17_12035"
     CDS             1206..1571
                     /locus_tag="VLJ17_12035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015665080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HSV23743.1"
                     /translation="MKYMLLVHHDEEAFGKFSETKQQQMLEESVELTHQLHAKRQYIN
                     ASPLQPAATAAIVRVRDGKSFVTDGPFIETREQLAGYFLIDAKDLNDAIGIASRVPGA
                     RIGTVEVRPAKEITGLPAE"
     gene            1693..2880
                     /locus_tag="VLJ17_12040"
     CDS             1693..2880
                     /locus_tag="VLJ17_12040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013215530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exo-alpha-sialidase"
                     /protein_id="HSV23744.1"
                     /translation="MSRVRVLVGTRKGAFVLTSDGKRKQWEVSSPHFAGWEMYHLKGS
                     PTDPNRLYASQSSSWFGQIIQRSDDGGKTWHQPGTPPGEPTTTPDGMPKGESNKFVYD
                     TSPETGKPLTTHQWYDGTAHPWEFKRVWHLEPSLTDPDTVYAGVEDAALFRSTDGGQT
                     WQELSGLRGHGSGSSWAPGAGGMCLHTILLDPNNPNRIFIAISSAGAFRTDDGGKTWK
                     PINRGLHSLYIPNPTAEVGHCVHRIAMHRSRPGVLFMQKHWDVLRSDDAGESWREISG
                     NLPTDFGFAIDVHAHEPETIYVVPIKSDAEHFPPDGKLRVYRSRTGGNEWEALTKGLP
                     QSDCYVNVLRDAMAVDGLDKCGVYFGTSGGQVYASADAGDSWAPIVRDLPPVVSVEVQ
                     TLP"
     gene            2877..>3121
                     /locus_tag="VLJ17_12045"
     CDS             2877..>3121
                     /locus_tag="VLJ17_12045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015597660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HSV23745.1"
                     /translation="MIRVTLPAHLRKLAQVDGEVKLDVDAPVTQRSVLDALETRYPML
                     RGTIRDHVTQRRRAFVRFFACGEDLSHEPPDAPLPDAV"
BASE COUNT          672 a          927 c          967 g          555 t
ORIGIN      
        1 cttatgcgat tcaaagacag cccggagccc catgcgccgg gcatgctccc gccgggtgcc
       61 gaaaacaagg tgatgcacgc gagcctgcgc atcggcgatt ctacggtgat ggcctccgat
      121 ggccagtgcc tcggtcggcc gaacttccaa ggctttgccc tatcgctgcc ggtgtcgaat
      181 gatgccgaag ccgagcggct gtttgcggcg ctgggcgacg gcggaaaggt ttgcatgccg
      241 ctcgccaaga ctttcttttc ctcgcgattc ggcatggtcg ccgaccgatt cggcgtctcg
      301 tggatgatca tcgtggcgca gtgagactgt gcaatgattt ggagcacgcg atgaaatacc
      361 tgtgccttgg ataccacgaa gaaaaaacgt ggcgcgcgat gaacgaaggc gaccgaaaag
      421 cgctgttgga agagagcttc gcctacgcgg ccttacttcg gaagaacggc cactacattg
      481 acggcaaggc gctccaagac gccggaaccg cgaccacgct gcggtttgat aagggcaaag
      541 ttgccatcac cgatggtccc tttgccgaaa caaaggagca gctgggtgga gtcatggtgc
      601 tcgaagccaa agacctgaac catgccattc agttgatgtc gcagttaccc tgcatgcgcg
      661 tgggcggatg cctggagatc cggccgatca acgaagaaat catcggctaa aagacagaac
      721 agaggaaaca gcatgaaata catgttgctg atttattttg atgagcaagc agcgttgagc
      781 gagaccgagc ggcaggagtg ttatgcagaa tccacgcagc tcgcgcaaca gcttcattcg
      841 agcgggcagt atctcggcgc caacccgctg cactcagcat caatggcgac cagcgtccgg
      901 gtgcgcaacg gcaaacggtt ggtgaccgac gggccattcg cggagacgcg ggaacagcta
      961 ggcggctact tcctcatcga ggcaaacaat ctcgacgagg cgatcggcat tgccgcgcgg
     1021 attcccatgg cgcgtaaagg caccgtcgag gtccgaccgg tgatagatat cccgggcctg
     1081 ccgactgcat agcggtggcg gaggtgttgg agtgagaccg caaacgcaga catctcgcgc
     1141 tgcgcagggt cgttgtcgat tgtcggctct ttcgaacgac tatccgatgt cgatggaggt
     1201 ttctcatgaa atacatgttg ctggttcatc acgacgaaga ggccttcggc aagttcagcg
     1261 agaccaagca gcagcagatg ctcgaagaat cggtggagct tacacaccag ctccacgcca
     1321 agcggcaata tatcaacgca tcgccattgc agccggcggc gaccgcggcc atcgttcggg
     1381 tgcgcgacgg caaatcgttc gtcaccgacg gtccgttcat cgagacgcgc gagcagctag
     1441 caggctattt cctgatcgat gccaaagacc tcaacgacgc gatcggtata gcttctcggg
     1501 ttcccggggc gcgcatcggc acagtcgagg ttcggcctgc gaaggagatc acgggcctgc
     1561 ccgctgagta gcaggcgcca cgagcggatt gaataatccc cgcagcaagc tgcggggaat
     1621 tgatccatag agattgaata ctgtttttga gaaggtttgt acaaaaacaa caaagctagg
     1681 aaggagtatg ttatgagccg agtacgggta ctggttggaa cacgcaaggg agcgttcgtc
     1741 ctgacatcgg acggaaagcg caaacaatgg gaggtgagca gcccccattt cgcgggctgg
     1801 gagatgtatc acctcaaggg atctcccacg gatccaaacc ggctgtatgc gtcgcagtcg
     1861 agcagctggt ttgggcaaat cattcaacgc tcggatgacg gcggcaagac atggcaccaa
     1921 cccggaacac cccccggcga gccgaccacc accccggacg gcatgcctaa gggcgagagc
     1981 aacaagtttg tttacgacac gtctcccgaa accggcaagc cactcaccac gcaccaatgg
     2041 tacgacggca cggcgcatcc gtgggagttc aagcgagtct ggcatctcga accgtcgctg
     2101 accgatccag acaccgtcta cgccggggtt gaagacgccg cgttgttccg ctcgactgac
     2161 ggcgggcaga cgtggcagga gctttcggga ctgcgcggcc acggctcggg gtcctcgtgg
     2221 gcgccgggcg caggtggcat gtgcctgcac acgatccttc tcgatccgaa taatccgaac
     2281 cggatcttca tcgccatctc atcggcgggc gctttccgta ccgatgacgg cggcaaaacc
     2341 tggaaaccga tcaaccgcgg cctgcattcg ctctatatcc ccaacccaac agcggaggtt
     2401 ggccactgcg tgcaccgcat tgccatgcac cggtcacgtc ccggcgtact gttcatgcag
     2461 aagcactggg acgtcttgcg cagcgacgac gcgggcgaat cgtggcgcga gatcagcggc
     2521 aacctgccga ccgacttcgg tttcgcgatc gacgttcatg cccacgagcc ggagaccatt
     2581 tacgtcgtgc cgatcaagag cgacgcggag cattttccgc ccgacggcaa gctgcgcgtg
     2641 taccgcagcc gcaccggcgg caacgagtgg gaggcgctta cgaaaggcct gccgcagagc
     2701 gactgctacg tgaacgtact gcgcgacgcg atggccgtcg acgggctcga taagtgcggc
     2761 gtgtacttcg gcactagtgg cgggcaggtg tacgcatcgg ctgacgccgg cgatagttgg
     2821 gcgcccatcg tccgcgatct tccgcccgtg gtgtccgtcg aggtccagac cctgccatga
     2881 tccgagtcac gctcccggca cacctgcgca agctcgcgca agtcgacggc gaggtgaagc
     2941 tcgacgtcga cgctccggtc acgcaacgtt cggtactcga cgcgctcgag actcgttatc
     3001 cgatgctgcg cggcacgatt cgcgaccacg taacgcaacg gcgccgcgcg tttgtaagat
     3061 tcttcgcctg cggggaggat ctctcccacg aaccgccgga cgcgccgctg cccgatgcag
     3121 t
//
LOCUS       DATILV010000527         3282 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4467741, whole genome shotgun sequence.
ACCESSION   DATILV010000527 DATILV010000000
VERSION     DATILV010000527.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3282)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3282)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3282
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4467741"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..370
                     /locus_tag="VLJ17_12050"
     CDS             <1..370
                     /locus_tag="VLJ17_12050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003597867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HSV23746.1"
                     /translation="QPGCPYCRETHLVNFADKTIETYIRDHFEVLQLNLRGSRIVTDF
                     DGEKLGERQLAGKYGVRGTPIIQFFPNRSDLGQKAPREREVNRIPGYMAPAGFLVMFA
                     FVAERAYERGSLRDYLRRLS"
     gene            397..864
                     /gene="soxX"
                     /locus_tag="VLJ17_12055"
     CDS             397..864
                     /gene="soxX"
                     /locus_tag="VLJ17_12055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015821163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur oxidation c-type cytochrome SoxX"
                     /protein_id="HSV23747.1"
                     /translation="MKRSCCVVGLVGALIAPAAGQTALPLAPFDVVVARGVAAIPASL
                     TGKPGDPKEGEKVVLERRLGNCLSCHEIGALRGEPFHGDVGPPLDGVAGRWDTGTLRM
                     IVVNAKKVFGDETVMPAFYRVDGLYRVRPDFLGKPILTAQQVEDVVAFLATLK"
     gene            873..1325
                     /gene="soxY"
                     /locus_tag="VLJ17_12060"
     CDS             873..1325
                     /gene="soxY"
                     /locus_tag="VLJ17_12060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012752905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate oxidation carrier protein SoxY"
                     /protein_id="HSV23748.1"
                     /translation="MLQRLNRREALTAGAGALAAGLGLAAGPAHALNDYADQIKKFTG
                     GKVPVEGGLKLELPELAENGNTVPLSVTVDGPMGEGTYVQEILVVAPANPNARVIRFR
                     FSPASVPEASTRIRLAETQDVVAVAQLSDGTFRQISRQIKVTIGGCGG"
     gene            1406..1735
                     /gene="soxZ"
                     /locus_tag="VLJ17_12065"
     CDS             1406..1735
                     /gene="soxZ"
                     /locus_tag="VLJ17_12065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015821161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate oxidation carrier complex protein
                     SoxZ"
                     /protein_id="HSV23749.1"
                     /translation="MAEVKPRIRLDRKNVKRGETVDVKTLVSHVMETGLRKDSSGKLI
                     PRMIINTFTCELNGKFVFGCDLESAVSANPYFEFKFKPTESGTLKFTWVDDEGARIEA
                     TETITVT"
     gene            1760..2591
                     /gene="soxA"
                     /locus_tag="VLJ17_12070"
                     /pseudo
     CDS             1760..2591
                     /gene="soxA"
                     /locus_tag="VLJ17_12070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667495.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0070069 - cytochrome complex [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016669 - oxidoreductase activity, acting
                     on a sulfur group of donors, cytochrome as acceptor
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0019417 - sulfur oxidation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur oxidation c-type cytochrome SoxA"
     gene            complement(2626..3273)
                     /gene="msrA"
                     /locus_tag="VLJ17_12075"
     CDS             complement(2626..3273)
                     /gene="msrA"
                     /locus_tag="VLJ17_12075"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015597927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HSV23750.1"
                     /translation="MRSTAEVAPAIPAPVVDEELGARMTTLEVAVLAGGCFWGVQGVF
                     QHVNGVTNVVSGYAGGDKNSAQYEVVGSGRTGHAESVRITFDPREISYGRILQIYFSV
                     AHDPTQLNRQGPDVGTQYRSAIFSLSAEQARVAKAYIAQLNQARVYDAAIVTKIEPNR
                     EFYPAEDYHQDFMALHPDHPYIAYNDLPKIEELKRLFPNAYRAEPVLVAAVRPSN"
BASE COUNT          659 a          940 c         1048 g          635 t
ORIGIN      
        1 gcagccgggc tgtccctatt gccgggaaac gcatctggtc aatttcgccg acaagaccat
       61 tgaaacctat atccgcgacc atttcgaggt gctccagctc aatctccgcg gttcgcgcat
      121 tgtcaccgat ttcgacggcg agaagcttgg cgaaaggcag cttgccggca agtacggggt
      181 gcgcggcacc ccgatcattc agttcttccc caataggagt gacctcggtc agaaggcgcc
      241 gcgtgaacgc gaggtcaatc gtatcccagg gtatatggct cccgcgggct ttcttgttat
      301 gtttgcgttt gtggccgagc gcgcctatga gcgaggctca ctgcgcgact atctgcgccg
      361 gctgagttga tcagcggtcc cgggaaacag gtgtcgatga aaagatcgtg ttgtgtcgtc
      421 ggcttggtgg gtgcgctgat tgcgcctgcc gccgggcaga cagcgcttcc gcttgcgccc
      481 ttcgatgttg tggtcgcgcg cggtgtcgcc gccataccgg cctccctgac cggcaagccc
      541 ggcgatccaa aggagggcga gaaggtggtg ctcgagcgcc gcctcggcaa ttgcctctcg
      601 tgccatgaaa tcggcgcgct gcggggggaa ccgtttcacg gcgatgtcgg cccaccactc
      661 gacggcgtgg ccggacgctg ggacaccggg acgttgcgca tgatcgtagt caacgccaag
      721 aaagtgtttg gcgatgagac ggtcatgccg gcattctatc gggttgacgg gctctaccgc
      781 gtgcggccgg atttcctcgg caagccgatc ctgaccgccc aacaggttga agatgtggtc
      841 gcgtttctcg cgacattgaa atgagggatg tgatgttgca acgattgaac cgccgcgagg
      901 cgctgacagc cggtgccggg gcattggctg cgggacttgg attggcggcc ggtccggcac
      961 acgcgctgaa cgactacgct gaccagatca aaaagttcac gggcggcaag gtgccggtcg
     1021 agggcgggct caagcttgag ctgccggagt tggcggaaaa cggcaacacg gtgccactgt
     1081 cggtcacggt agatggcccg atgggtgagg gcacctatgt gcaggaaatc ctggtggtgg
     1141 cgccggcaaa cccgaacgcc cgggtgatcc gattccgttt ctcgcctgcg agcgtgccgg
     1201 aggcttcgac ccgcatccgg cttgccgaga cccaggacgt ggtcgcggtc gcccagctga
     1261 gcgacgggac gttccgccaa atatcacggc agatcaaggt gacgatcggc ggctgcggcg
     1321 gctaacgcat gatcgagaaa agttgcagac ttttcgcacc agatcatgcg gcactagaac
     1381 gccggcagca aattcggaga gcgctatggc agaggtgaaa ccccgcatcc gtctcgacag
     1441 gaagaatgtc aagcgcggcg agaccgtcga cgtcaagacg ctggtttctc acgtcatgga
     1501 aaccggtcta cgcaaagatt cgagcggcaa gctcatcccg cgcatgatca tcaacacatt
     1561 cacttgcgag ctgaacggca agttcgtttt tggctgcgat ctcgaaagcg cagtttccgc
     1621 caatccgtat ttcgagttca agttcaagcc gacggaatcc ggcacgctta agttcacctg
     1681 ggtcgatgac gaaggcgcgc gcatcgaggc gactgagacg attacggtga cgtgacaacc
     1741 ggcccggcgg ggaaagatga tgagcttgcg tttggccttc tgcgcaatcg ttatgctggc
     1801 agtcgccaca attgcgctgg ctgaaaacgg ccttgagcgt ccgcattggc aggggcatgg
     1861 catcaaggcg ccggacaaga attttccttt tgaggagatc atatcgggat actggtttcg
     1921 caccaaagaa acccaggcga tccaggacga cgatttcaac aatccgggat ttttcgccat
     1981 tgaacaaggc gagcaactgt ggtcgcagcc cgacggtgcg gccggcaaat cctgcgcgag
     2041 ttgccatcag gaggcggcaa agagcatgaa aggtgtcggt gccgcgatgc cgaaatggag
     2101 cgagactcaa gaagccggtc aatgtcgagt agcaaatcaa catctgtcgc acggagcgga
     2161 tgcaggccgc gccttggaaa tttggcgctg ccgaaatgac cgcgatgacc acctatgtgc
     2221 gcttccagtc tcgcggcatg ccggtgaatc cgcgcgtcga cggaccgatg acgccgtggt
     2281 tcgagaaagg caaagagctc tattatacgc gtcacggtca gctcgatctt gcctgcgcga
     2341 gctgccatga aaggaaccac ggcaagaacc tgcgtgctga ttttttgagt cagggccagt
     2401 ccaacggctt tccggtttat cgcctgcgcg accagcgcct ggtgccgctc catgagcgca
     2461 tgcagggctg catattcgac gtgcgcggca tcccgtacgc gccgctttcg gacgaggcgg
     2521 tcgcgcttga gctctatgtg gcttggcgcg gcaccggatt gcccgtcgag acgccggcgg
     2581 tgcggaattg aacgcgatct ttaccgtgtg gctccggcag aatgtttagt tcgacggtcg
     2641 cacggccgca acgagcacgg gctctgccct gtaggcgttg gggaacaaac gtttcaactc
     2701 ctcgatcttc ggcaagtcgt tgtaggcaat gtacggatga tcggggtgca gtgccatgaa
     2761 atcctgatgg tagtcctcgg cagggtagaa ctcgcgattg ggctcgatct tggtgacaat
     2821 cgcggcatcg tagactcgcg cctggttgag ctgcgcaata taagccttgg caactctcgc
     2881 ctgctcggcg ctgagcgaaa agatcgcaga acggtattga gtgccgacat ccgggccctg
     2941 gcggtttagc tgggtggggt cgtgcgcgac cgagaaatag atctgcaaaa tgcgtccgta
     3001 gctgatctcg cgaggatcga aagtgatgcg aacggactcc gcatgacccg tcctgcccga
     3061 gcccaccacc tcgtattgcg cggagttctt gtcgccgccg gcgtagcccg acacaacatt
     3121 tgtcacgcca ttgacgtgct gaaagacccc ctgcacgccc caaaagcatc cgccggccag
     3181 gacggcgact tccaaggttg tcatccgcgc gccaagttcc tcatcgacca cgggcgcggg
     3241 gatcgcgggg gcgacctcgg ccgtcgaccg caacgccgta aa
//
LOCUS       DATILV010000528         5750 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4211310, whole genome shotgun sequence.
ACCESSION   DATILV010000528 DATILV010000000
VERSION     DATILV010000528.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5750
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4211310"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            56..592
                     /locus_tag="VLJ17_12080"
     CDS             56..592
                     /locus_tag="VLJ17_12080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSV23751.1"
                     /translation="MSVARHQRPPELVGVSLEEIMTKCVGRFRDKKPDWAAFADAKIE
                     GYKRAQHRFIGAGGSGKHDDPTIIPPGNFTLSIIYVEPGQGNAAHTHEVEECFFVLQG
                     FLDVFVEDESGKRVTTRLGPWDCISCPAGVIHGYQNDSLEPVYFQVMLGRGKPETMGY
                     ADEELFRRRADHLKAGAA"
     gene            634..777
                     /locus_tag="VLJ17_12085"
     CDS             634..777
                     /locus_tag="VLJ17_12085"
                     /inference="COORDINATES: protein motif:HMM:NF020757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009036 - type II site-specific
                     deoxyribonuclease activity [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BglII/BstYI family type II restriction
                     endonuclease"
                     /protein_id="HSV23752.1"
                     /translation="MALEIEWNNKDSFFDRDLENFKRLHADGAISVGIIVMRGHSRIC
                     AHR"
     gene            817..987
                     /locus_tag="VLJ17_12090"
     CDS             817..987
                     /locus_tag="VLJ17_12090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23753.1"
                     /translation="MGYEPTCKQRRAIELRVTHKKNPNDFRETFVDKFFADKFGEATT
                     HWCKLMIASAKA"
     gene            complement(1083..1766)
                     /locus_tag="VLJ17_12095"
     CDS             complement(1083..1766)
                     /locus_tag="VLJ17_12095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MT-A70 family methyltransferase"
                     /protein_id="HSV23754.1"
                     /translation="MSKTKRVDDSNMSAMRSIAARDLVGFAKDCRFATILADPPWQFT
                     NKTGKVAPEHKRLSRYGTMKLDEIMALPVAELAAPTSHLYLWCPNAMLPEGLAVLKAW
                     GFTYKSNVVWHKIRKDGGSDGRGVGFYFRNVTELILFGVRGKNARTLAPGRRQVNLLA
                     TRKREHSRKPDEQYEIIESCSAGPYLELFARGSRRGWTTWGNQASDDYHPTWRTYPHH
                     SQAHRVAAE"
     gene            complement(1997..2260)
                     /locus_tag="VLJ17_12100"
     CDS             complement(1997..2260)
                     /locus_tag="VLJ17_12100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008873870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23755.1"
                     /translation="MATPTSQEALERAERNFKKKETEAREASKAMAEYKARLRAEREK
                     TARLKLLREAKEAADAAKAAKVTTKKALDPVKEPAKKRGAAAK"
     gene            2784..4532
                     /locus_tag="VLJ17_12105"
     CDS             2784..4532
                     /locus_tag="VLJ17_12105"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003984 - acetolactate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 3 large subunit"
                     /protein_id="HSV23756.1"
                     /translation="MTGAEMVIRALADQGVEHVFGYPGGAVLPIYDALFHQEKVRHIL
                     VRHEQGAVHAAEGYARSTGKVGCVLVTSGPGATNAVTGLTDALCDSTPLVCITGQVPT
                     HMIGNDAFQECDTVGITRPCTKYNYLVKNIADLPRVLHEAFYVAASGRPGPVVVDIPK
                     DIQFATGAYAKPNAFPHQGYRPRLKGDIDKIKAAVALMTTAKRPLFYTGGGVINSGPA
                     ATRLLRELLRLTGFPVTSTLMGLGAVPAADPQWLGMLGMHGTYEANLSMHDCDVMVCV
                     GARFDDRITGRLDAFAPHSRKIHIDIDPSSINKNVKVDIGIVGDCAHVLDDMVRLWRE
                     VRATPDRAALKAWWGQIDKWRGRKSLAYRASNDFIKPQYAIERLYAATKDRDVYITTE
                     VGQHQMWAAQFFHFQEPNRWMTSGGLGTMGYGLPAAVGVQLAHPESLVIDIAGEASVL
                     MTMQEMSTAVQYRLPIKIFILNNQYMGMVRQWQELLHGGRYSESYTEALPDFVKLAEA
                     YHAVGIRCQKPADLDAAIAEMIDVKRPVIFDCVVDPAENCFPMIPSGRAHNEMILGDA
                     AESLDDAVTEEGKVMV"
     gene            4723..5271
                     /gene="ilvN"
                     /locus_tag="VLJ17_12110"
     CDS             4723..5271
                     /gene="ilvN"
                     /locus_tag="VLJ17_12110"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009796863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990610 - acetolactate synthase regulator
                     activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HSV23757.1"
                     /translation="MNTSPSTTHYPAATVKEAVESHTLAVIVDNEPGVLARVIGLFSG
                     RGYNIESLTVSEIEHQKHLSRITIVTRGTPMVIEQIKNQLDRMVPIHRVVDMTIAGPA
                     IERELAMVKVRGKGDNRVEALRLADAFRARVIDATTESFVFEITGGSVKIDQFVNLML
                     PLGLVEVSRTGIVAIARGPEGM"
BASE COUNT         1129 a         1748 c         1746 g         1127 t
ORIGIN      
        1 gtccgccggg cgcagcgggg agtcgccaag catccatgtc gagaggagac gtcgcatgag
       61 tgttgcacga catcagcggc cccccgagct cgtcggcgtg tcgctcgagg agatcatgac
      121 aaaatgcgtc ggccgcttcc gcgacaagaa gccggactgg gccgcgttcg cggatgccaa
      181 gatcgaaggg tacaaacgcg cgcagcaccg cttcatcggc gccggcggct cgggcaagca
      241 cgacgacccg accatcattc cgcccggcaa cttcacgctg tcgatcatct atgtcgagcc
      301 ggggcagggc aacgcagcgc acacccacga ggtcgaggaa tgcttcttcg tgctgcaagg
      361 attcctcgat gtgttcgtgg aggatgaatc cggcaagcgc gtcaccacgc gcctcggccc
      421 atgggactgc atctcgtgcc cggcaggcgt tatccatggc tatcagaatg acagcctcga
      481 gcccgtatac ttccaggtca tgctgggccg cggcaagccc gaaaccatgg gctacgcgga
      541 tgaggaactg ttccggcgcc gcgccgacca tttaaaggcg ggggccgcgt aggaagtcgc
      601 aatcgccatg cgcgcgagtt ttcatgcgga gttttggcgc tggaaatcga gtggaacaac
      661 aaagattcat tctttgatcg cgatctcgag aattttaaac ggctgcacgc tgacggggca
      721 atctccgtgg gcattatagt catgcggggc cactcgagaa tatgcgcgca ccggtaaggc
      781 gttttgtcga cgagcgcaat tcgacgacct taaacgatgg gctacgaacc gacttgcaag
      841 caacgccgtg cgatcgaact tagggtaact cacaagaaga accccaacga ttttcgggag
      901 acattcgtcg ataagttctt cgccgacaag tttggcgaag cgactacgca ctggtgtaag
      961 ttgatgatcg catccgccaa ggcgtaggca atccatgccc gttggtactt gtcggactac
     1021 cggacgatgt cgtcaccttc gacgaaggtg atcgcgcgac aaggagttag gagacgacga
     1081 agctattctg cggcgacacg atgcgcctgt gaatgatgcg ggtaggtcct ccaagtagga
     1141 tgataatcat cgctcgcctg gttgccccac gtcgtccaac ctcgtcggct tccccgcgca
     1201 aacaactcca gatacggccc tgcggagcat gactcgataa tttcgtattg ttcgtccggc
     1261 ttgcgcgaat gttcgcgctt tcgcgtcgcc aataaattta cttgccgacg gcctggcgcc
     1321 agtgtgcggg cgttcttgcc gcgcacgccg aacaagatca gttcggtcac gttgcggaaa
     1381 tagaagccga caccgcgacc gtccgaaccg ccatccttgc ggattttgtg ccaaacgacg
     1441 ttggatttat aagtgaagcc ccaagccttc aaaaccgcga gtccctcggg cagcattgcg
     1501 tttgggcacc acagataaag atgagacgtc ggtgcggcca attccgcaac cggcagtgcc
     1561 atgatttcgt cgagcttcat ggtgccatag cgcgacaggc gcttgtgctc cggtgcgact
     1621 ttcccggtct tgttggtgaa ttgccacggc ggatcggcga ggatggtcgc gaagcggcaa
     1681 tcctttgcga agccgacaag gtcgcgcgcg gcaatgctcc gcattgcaga catgtttgag
     1741 tcgtcaacgc gcttagtctt cgacataggc agcgattctt gtagcagtcg actcttgata
     1801 gcagtcgacc ttgtgggtgg gcgcgacgcg ttcgacgttg tccaccacaa tccgtgtgtc
     1861 gaatgccttt tcggtccatc cgcggcggcc gcccggactg aggatgtcga ttgcgtgcgc
     1921 atcttcaccg caaggacagg ctttatacag tgttcctgtt atgttctaaa gtgcaaattg
     1981 gggaaattgg cagtcgctat ttcgccgccg cccctcgctt cttcgccggc tctttgaccg
     2041 gatcgagggc tttttttgtg gttaccttag cggccttggc cgcatcggcc gcctccttcg
     2101 cctcccgcag cagcttcagc cgtgcggtct tctcccgctc ggcccgcagt ctggctttgt
     2161 attccgccat tgccttggag gcctcgcggg cctccgtttc ctttttctta aaattccgtt
     2221 cggcccgctc cagggcctcc tgcgacgtag gggttgccac tgatgctttc ctatttttgc
     2281 ggcgacatcg gaacttgata tggggtcggc ggcccgagtc cgccatggtg ccaggaaaaa
     2341 cctactgcgt tgcatcaaga aaggcttgac agcagtgcaa tcggacgtca aaatcgcgca
     2401 acaatgtgat cgaacaggat atctatgcgc aattttgttg tcgtgcttgg gaggcgcatc
     2461 gccgggggcg ggtaaccgtt cgcgaacgag gcgatgcgcg acaagggcct tcgcgggccc
     2521 ttttttcgtg tctgaagggc tcgaccaata cgtccacgag gtagtgtaaa acacgaggta
     2581 gtgaaaaaat ggagcacccg atgccgacgc aaacacgctc ccggtcgaca agtgcccaaa
     2641 cgagtgcacc accggttgca atgtccaagg atgcgggcgg gacgcccgcc gtccaatctt
     2701 caaaggatgc gggccggact ccaacgctgc ggccctcgaa cgaggcgggc gggacgccgg
     2761 cggttccgga ggccagcacc cagatgaccg gcgccgagat ggtgatccgg gcgctggccg
     2821 atcagggcgt cgagcacgtg ttcggctatc cgggcggcgc ggtgctgcca atctacgacg
     2881 cgctgttcca tcaggagaag gtgcgtcaca tcctggtgcg ccatgagcag ggcgcggtgc
     2941 atgccgccga aggctatgcc cgctcgaccg gcaaggtcgg ctgcgtgcta gtcacctcgg
     3001 ggcccggcgc caccaacgcc gtcaccggcc tcaccgacgc attgtgcgac tcgaccccgc
     3061 tggtgtgcat caccggccag gtgccgaccc acatgatcgg caacgacgcc ttccaggaat
     3121 gcgacactgt cggcatcacc cggccctgca ccaagtacaa ttacctggtc aagaacatcg
     3181 ccgatctgcc gcgcgtgctg cacgaagcgt tctatgtggc ggcgagcggg cggcccggtc
     3241 cggtggtggt cgacatcccc aaggacatcc aatttgccac cggcgcctac gcgaagccga
     3301 acgcgtttcc gcatcaaggc tatcggccga ggctcaaagg cgacatcgac aagatcaagg
     3361 cggcggtcgc cctgatgacg acggcgaagc ggccgctgtt ctataccggc ggcggcgtca
     3421 tcaattccgg gccggcggcg acgcgactgc tgcgcgaact cttgcggctc accggctttc
     3481 cggtgacctc gaccctgatg ggcctcggcg cggtgccggc cgccgacccg caatggctcg
     3541 gcatgctagg catgcatggc acctatgagg ccaacctttc gatgcacgat tgcgacgtaa
     3601 tggtttgcgt cggggcgcgg ttcgacgatc gcatcaccgg gcggctcgac gccttcgcgc
     3661 ctcactcgcg gaaaatccat atcgacatcg acccgtcctc catcaacaag aacgtcaagg
     3721 ttgacatcgg catcgtgggc gactgcgccc atgtgctcga cgacatggtg cggctgtggc
     3781 gtgaagtccg cgcgacgcca gaccgggctg ccctgaaggc gtggtgggga cagatcgaca
     3841 agtggcgcgg gcgcaagtcg ctggcctacc gggcttcgaa cgacttcatc aagccgcaat
     3901 acgccatcga gaggctctat gcggcgacga aggatcgcga cgtctacatc accaccgagg
     3961 tcggtcagca tcagatgtgg gcggcgcagt ttttccattt ccaggagccc aaccgctgga
     4021 tgacctcggg tggactcggc accatgggct acggattgcc ggccgcggtc ggggtacagc
     4081 tcgcccatcc ggagtcgctc gtcatcgaca tcgccggcga ggcctcggtg ctgatgacca
     4141 tgcaggagat gtcgaccgcc gtgcagtacc gcctgccgat caaaattttc atcctcaaca
     4201 accagtacat ggggatggtg cggcagtggc aggagctgtt acacggcggg cgctattcgg
     4261 agagctacac cgaggcgctg ccggatttcg tcaagctcgc cgaggcctat catgcggtcg
     4321 gcatccgctg ccagaagcct gccgacctcg acgccgccat cgctgagatg atcgacgtga
     4381 agaggccggt gatcttcgac tgcgtggtag acccggcgga aaattgtttt cctatgatcc
     4441 cgtccgggcg ggcgcacaac gagatgattc tcggcgatgc ggccgaaagc ctggacgatg
     4501 ccgtcacgga agaggggaag gtgatggtat gatcgcagga cggatgacgc agaacgccgt
     4561 cttccccgca tttcgctcaa tgcgggctac tcatcgctgc caccgtggca gaagactcgt
     4621 agcccggatg gagcgcagcg aaatccgggt ccgctttccc agcattccgc ttcgctccat
     4681 gcgggctacg cactgtgatc gcgtctcgat tggacttatc gcgtgaacac ctctcccagc
     4741 accactcact accccgccgc caccgtaaaa gaggcggttg agtcccacac cctggcggtc
     4801 attgtcgaca acgagcctgg cgttctggcg cgggtgatcg gcctgttttc cgggcgcggc
     4861 tacaacatcg agagcctcac ggtctcggag atcgagcacc agaagcacct ctcgcgcatc
     4921 accatcgtga cgcgcggcac cccgatggtg atcgagcaga tcaagaatca gctcgaccgg
     4981 atggtgccga tccaccgcgt ggtcgacatg accatcgcgg gcccggcgat cgagcgcgaa
     5041 cttgccatgg tcaaggtgcg cggcaagggc gacaaccggg tcgaggcgct gcggctcgcc
     5101 gatgcgttcc gcgcccgggt catcgacgcc accaccgaaa gcttcgtgtt cgaaatcacc
     5161 ggcggctcgg tgaagatcga ccagttcgtg aacctgatgc tgccgctcgg cctcgtcgag
     5221 gtgtcgcgca ccgggattgt ggcaattgcg cgggggccgg aagggatgtg agggcgggac
     5281 cgcgggcctc ccgcccgcag tctccgtttt ttgaccgcaa gggcgtggcc catgtccgag
     5341 cgtgaaatcg ccctcaacaa tgaaatactg cttggtgttg tcagctcaac gtcgcgcagt
     5401 cccgcaaaca atcaaagatc ttttctctgt ttgaaacagt gagtccgagt tttcgctgga
     5461 ccatgaccct tgtaaccgac tcaaaaccgt ttcgtcacag cgtttaaagg tggcgtggta
     5521 atcgagggct tgatgccccc tattttgctc cgttcaaaga tgcaaatgaa ccgtgatcgt
     5581 ctatcccaaa aggaactcgg gagcattcca atcaaaggtt tttgttccat ttggaatacg
     5641 cccattgggc tacttcaagc cggtccagct cacttaaaag ccgcgttcaa caagttcgcc
     5701 agtcgcactc cagccaaagc cacccgctgc ttggcgagct ctacagcgtt
//
LOCUS       DATILV010000529        16428 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1145451, whole genome shotgun sequence.
ACCESSION   DATILV010000529 DATILV010000000
VERSION     DATILV010000529.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 16428)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16428)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16428
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1145451"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..485
                     /locus_tag="VLJ17_12115"
     CDS             <1..485
                     /locus_tag="VLJ17_12115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019964864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSV23758.1"
                     /translation="VSLQKIDVAAAVIASIMVAGLAVFFQNTRIGRALRAVADNHKAA
                     LSVGISLEQIWVVVWFAAGVVALATGIMWGARSNVSFALEIVALKALPVLVLGGFTSV
                     PGAIVGGIIIGVSEKLGEFYWGPLLGSGIESWLAYVIALVFLLVRPQGLFGEKIIERV
                     "
     gene            488..1564
                     /locus_tag="VLJ17_12120"
     CDS             488..1564
                     /locus_tag="VLJ17_12120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009467584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSV23759.1"
                     /translation="MLYRETGQFKTSYAADAAVFPILQDRIGIAIILILAFAVVPLAF
                     SSFSISTVLIPILVFSLAAIGLNVLTGYAGQISLGTGGFMGVGAYTCYKLTTLFPDVN
                     IIVLIVLSGFAAAAIGTLFGLPSLRIKGFYLAVTTLAAQFFLSWCFVRVPWLYNYNVS
                     GAIEVPTRTMLGIPVTGPNATPATRYLIVLSLVVAMTWIASNLIRGRIGRMWMAVRDM
                     DIAAELIGVRLFRTKLIAFAVSSFYCGVAGAMMVFLWFGAAEADSFNIDLSFRILFMV
                     IIGGLGSLIGSFFGAALIWGLPIVLRGLPDLLGVSIRAATVEHLQFMIVGALIIFFLA
                     VEPNGLARLWQIGKQKLRVWPFPY"
     gene            1714..3042
                     /locus_tag="VLJ17_12125"
     CDS             1714..3042
                     /locus_tag="VLJ17_12125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007198331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV23760.1"
                     /translation="MRVAHIVLGLALATSSGVAVTAVQAQDSIYVPLLTYRTGPFAGS
                     GIPVANGLHDYLSMLNERDGGIGGVKLAIEECETGYDTKKGAECYEAVKGKMPVIMNP
                     WSTGITLQLIPKASVDKIPILSMGYGLSASAIGKDFPWIFNPPATYWDGLSMIFKYIG
                     GREGGLDQLKGKTIGYIFFEGGYGREPIPLLEQFAKDYGFQVKMYPVTVQEMQSQSAQ
                     WLSVRRDRPSWMIMWGWGAMNPTAIKEATKIGFAMDHFIGIWYSGSEDDTRAVGAEAK
                     GYTALNFNRIGAGFPAIQDIVKYVVDKGLSQVAKEKVGENYYNRGVYNSVLISEAIRN
                     AQRITGKKVVTGEDVRRGLEALSMTEARWRELGLPGFGGAITGVSCTDHNGHQSAYMQ
                     QWDGAKWIVASDWISPMKDRVRPLLEAAAKEYISKDPAWPKRTEPCDKSS"
     gene            3043..3837
                     /locus_tag="VLJ17_12130"
     CDS             3043..3837
                     /locus_tag="VLJ17_12130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV23761.1"
                     /translation="MLAVNNIEVLYDRVILVLKGVSLAVPRGGIVALLGANGAGKTTT
                     LKAISNLLRAERGEVAKGTILFDGAEVQALSPSEVVRRGCIQVMEGRHCFAHLTIEEN
                     LLTGAFTRRDGSAAIRRDLDLVYSYFPRLRERRAAIAGYTSGGEQQMCAIGRALMSRP
                     KMILLDEPSMGLAPQIVEEIFEIVGNLNAKEAVSFLLAEQNTNMALKYARYGYVLENG
                     RVVMDGEAKSLAENEDIKEFYLGIAEGKKKSFRDVKHYKRRKRWLM"
     gene            3846..5081
                     /locus_tag="VLJ17_12135"
     CDS             3846..5081
                     /locus_tag="VLJ17_12135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HSV23762.1"
                     /translation="MAQAYYDELEIRDAAGRESEQFARLPDIVARAFTAPGWARRLEG
                     VDPASVANRSGLAKLPLLRKSELPALQQADPPFGGFKLTPPGKARRLMMSPGPIFEPE
                     CESPDGYGTARTLFASGFRSGDIVHNAFSYHLTPGAFIFESGLHALGCAVIPGGVGNT
                     DQQLEAIAHFKPSGYAGTPDFLKVLLDGAERSGKNASSLKRALVSGAALPATLRRELG
                     ARGVDVLQCYAIAEVGVIAYETAARDGMVVNEHVIVEIVRPGTGDPAPDGEVGEVVVT
                     SFAPDYPMIRLATGDLSAVLPGPSPCGRTNLRIKGWMGRADQTTKIKGMFVYPAQVAE
                     IGRLHKQLGRLRLVVTRAGEQDVIILMAECAAAPEGLEAVVAATLQAVTKLRGEVRLV
                     AAGVLPNDGKVIADERGGA"
     gene            5125..6177
                     /gene="hemH"
                     /locus_tag="VLJ17_12140"
     CDS             5125..6177
                     /gene="hemH"
                     /locus_tag="VLJ17_12140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HSV23763.1"
                     /translation="MNEVPNHASFAQRPADHPKIQSGSVGVLVVNLGTPDATDARSVR
                     RYLREFLHDKRVIEENSLVWKFVLNAIILPLRPRRKGLDYEKIWNREQDESPLKTITR
                     SQADKLAAALSLGGKRVVVDWAMRYGNPSIRSRLAALVAQGCERILVVPLYPQYAAAT
                     SATVCDEVFRALMGMRWQPALRVAPPYFDETAYIEAVAASLEAHLKTLTFTPDVIIAS
                     FHGIPKSYFDKGDPYYCHCAKTTRLLRERLRLDDNGLMMTFQSRFGRAEWLKPYTDTT
                     VKELAARGVKNLVVVTPGFSADCLETLEEIAGENAEYFRHGGGENFAAVPCLNDSEPG
                     MRVIEAVVLRELQGWV"
     gene            6217..7212
                     /locus_tag="VLJ17_12145"
     CDS             6217..7212
                     /locus_tag="VLJ17_12145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008967483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HSV23764.1"
                     /translation="MFGGYDIFVLIVVFLAILTVFLGVKTVPQGYNWTVERFGRYTRM
                     LRPGLNLVVPFVDRIGRRMNVMEQVMDVPQQEVITRDNASVTVDGVVFFQVFDAAKAS
                     YEIAALDQAIIKLTMTNIRSVMGAMDLDQMLSHRDEINERLLRVVDAAASPWGIKVNR
                     IEIKDIIPPEDLIQSMGRQMKAEREKRAEILTAEGQRQSAILKAEGAKQAQILEAEGR
                     REAAFRDAEARERSASAEAKATEVVSQAIAKGEVAAINYFVADKYLRALTEIAHSPNQ
                     KVILLPFEATSVLATLGGIAEIAKATFAGTPSTPEASAPPPRPAIPAIPAQEPPS"
     gene            7222..7674
                     /locus_tag="VLJ17_12150"
     CDS             7222..7674
                     /locus_tag="VLJ17_12150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HSV23765.1"
                     /translation="MLTLIASLGAWDWFIAGGLLLVLEVLAPGVFMLWLGLAAMLVGT
                     ISLYFDWSWQAQFIAFAVFSVSAIPLWRRLEMEGEATTDQPFLNRRAEALIGRTFTLE
                     KPIVDNSGTVRVDDTVWRVTGADVPAGSRVKVTRVDGAALYVEAVGNQ"
     gene            complement(7705..8718)
                     /locus_tag="VLJ17_12155"
     CDS             complement(7705..8718)
                     /locus_tag="VLJ17_12155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014287026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HSV23766.1"
                     /translation="MPKLICRSEDQPLSESELALIACALRTLEAESGGLMALSAAIAN
                     GLGRAFITAIAMIRAARGRVIVSGMGKSGHIGNKIAATLSSTGTPAFFVHPAEASHGD
                     LGMITSDDVIIAMSWSGETAELKNLIDYSRRFRIGLIAITADAASTLGKAADLALVLP
                     QAREACPHNLAPTTSSLMQLALGDALAIALLESRGFTPLDFRVLHPGGRLGAALTFVR
                     DLMHTGPEMPLKPMGTKMSDAIVEMSAKSFGCVGINDAAGHLVGIITDGDLRRHMRPD
                     LLHARVEDVMTKGPTTVRPDQLASEAVEILNSLKRTVLFVAEGERAVGLVHMHDLLRA
                     GVA"
     gene            complement(8866..9741)
                     /gene="galU"
                     /locus_tag="VLJ17_12160"
     CDS             complement(8866..9741)
                     /gene="galU"
                     /locus_tag="VLJ17_12160"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012455339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003983 - UTP:glucose-1-phosphate
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009225 - nucleotide-sugar metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HSV23767.1"
                     /translation="MTPIRKAILPVAGLGTRFLPATKAMPKEMLPVVDRPLIQHVVDE
                     ARQAGIEHFIFVTGRNKGVIEDHFDRQFELELTLTERNRRTELELLAQDLPGAGQTSF
                     TRQQQPLGLGHAVWCAREIVGDEPFALLLPDVLVQAQRSCLTQMLDAYRQLPGHPNII
                     AVEEVPMDRVHMYGVVGVGKSKGQAFEITQMVEKPPREQAPSNLIITGRYILQPKIFE
                     ILANQARGAGGEIQITDAMIRLAQEQPFYGLKFEGRSFDCGSKIGFLAANIAYALARD
                     DIAPALRAEIKSLLG"
     gene            9984..11360
                     /locus_tag="VLJ17_12165"
     CDS             9984..11360
                     /locus_tag="VLJ17_12165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011924247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HSV23768.1"
                     /translation="MVGSKSLFGVLCVAGVLAGATGCATAQIIERLFPFLASTAPTPT
                     APAATDSAPNPQVSGTPEWSGQSGSSGHPLMTADAILAAAANFNGCLEGLWLDAARLG
                     IARATFDTHTSNLTPDLRIMDLMDAQPEFTKAFWDYLDVLVNDSRIKRGREILAQHRL
                     VFDAMEKAYGVDRHIVAAIWGVESNFGTSGGDRPVIRSTATLACVGRRQDYFRNEFLA
                     ALEILDRGDVSPDRLKGSWAGAFGPTQFMPTSFKRFAVDFDGDGRRDVVDSPADLIGS
                     TANNLKSDGWIPGQTWGYEVTLPAGFNFLLADGAKPLTMREWERLGVTRLSGRGYLRA
                     TDRAYLLVPAGANGPAFLMLNNFRVLMKYNPAEAYALAIGHLADRMRGDGPIVAAWPR
                     HERVLTSAERYELQQHLVRHGFDIGGEPNGRINAKSRSAIKSFQVSQGLVPDGFASAG
                     MLERLRQP"
     gene            11564..13132
                     /locus_tag="VLJ17_12170"
     CDS             11564..13132
                     /locus_tag="VLJ17_12170"
                     /inference="COORDINATES: protein motif:HMM:NF024863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH family hydrolase"
                     /protein_id="HSV23769.1"
                     /translation="MLAITMLVLAPAPSNAQFFEFPFQNRRQRGPFDWFDPAPQQQPA
                     PAPPPVDYTKAPAPKKPDSKAENTVTTPILVLGDSMADWLAYGLELAYAEAPEIGILR
                     RHRTNSGLIRTEVRSDPRGEYPDWPPAARELIASQKPKFVLMMIGINDRRQIREAVQV
                     AAASRPVKPALPRADDPAALELDKSSADKPNETPAAAAPESATPAGNRNLEFRSDAWS
                     EAYIRRIDDTITALKTSGVPVFWVGLPPLRGQKSAADIPFLNELYRSRADKAGIIYID
                     VWDGFVDEEGRYAQSGPDVEGQIRRLRTSDGVYFTQAGARKLAHYIEREVQRWLSTRA
                     APVAVTIPEEPKVDPAVAGRPGSQVRPLAGPAVPLIAGRGSETDDLLGGNARQPPSDA
                     MVTKVLVRGEPVQAPAGRADDFVWPRRGVAPVGSDPVVATTDLPMTPMLADRSAATTA
                     TAAAAPSGQSGGATAQAARRSAPRQTFAEMQQSQSIYRPDYRRPAAPPQFNFPSLFGG
                     GPSLFGGPPLFGRR"
     gene            complement(13173..14591)
                     /locus_tag="VLJ17_12175"
     CDS             complement(13173..14591)
                     /locus_tag="VLJ17_12175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012029768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit beta"
                     /protein_id="HSV23770.1"
                     /translation="MGKVTGFLEFERNDRDYEPVEARVRHWREFVLPLPEAETRQQAA
                     RCMNCGIPYCHTGCPVNNQIPDWNDLVYTGAWQEASHNLHATNNFPEFTGRVCPAPCE
                     ASCTLNIDDNPVTIKTIECAIADRAFEQGWVKPEPPSGKTGKSVAVVGSGPAGLACAQ
                     QLARVGHDVHVYEKNAKPGGLLRYGIPDFKMEKHLVDRRVVQMEAEGVHFHCGVHVGV
                     DLASTELVARHDAVVLAGGAEKSRDLPIPGRDLKGIHFAMEFLPQQNRRIDNEPQDGV
                     VPILATGKHVVVIGGGDTGSDCIGTSIRQGALSVTNFEIMPKPPEKENKALTWPDWPL
                     KLRTSSSHEEGAERDFAVLTTEFIGEGGSVKRLRCTRCDQNFKPIPGTEFELPADLVL
                     LAMGFVHPVHEGMIDELGLALDPRGNVKADTIHYVSSVSKIFAAGDMRRGQSLVVWAI
                     REGRQAAHAVDKFLMGATTLPT"
     gene            complement(14766..>16428)
                     /locus_tag="VLJ17_12180"
     CDS             complement(14766..>16428)
                     /locus_tag="VLJ17_12180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011471240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016638 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutamate synthase-related protein"
                     /protein_id="HSV23771.1"
                     /translation="HSTPGVGLISPPPHHDIYSIEDLAQLIFDLKNVNPAGAVSVKLV
                     SEVGVGTVAAGVSKARADHVTIAGFEGGTGASPLTSIKHAGSPWEIGLAETHQTLVAN
                     RLRSRIAVQVDGGIRTGRDVVVGALLGADEFGFATAPLIAAGCIMMRKCHLNTCPVGV
                     ATQDPVLRKRFTGQPEHVINFFFFVAEEVRELMAELGFRYFDDMIGQMQMLDQRRVIA
                     HWKAKGLDFSKLFYKPDAPRDVKIFKCEPQDHKIHNILDRRLIAESQPALDRGAPVRI
                     VTTIKNTDRAVGAMLSGEIAKRYGHAGLPDDTIHVKLTGTAGQSFGAWLARGITLELE
                     GEGNDYVGKGLSGGRIIVRPPINSGVTPEYSIVVGNTVLYGAISGECYFRGIAGERFA
                     VRNSGAIAVVEGAGDHCCEYMTGGIVVVLGNTGRNFAAGMSGGIAYVLDQDGAFPTLC
                     NLAMVELEPLLEEEIDATAYHQAGDLDGHGRIDIMSDLTRYDAARLHLLISRHARFAG
                     SRRAAQIIANWDAFLPKFRKVMPVEYRRALAELAKEKAAKMEAAE"
BASE COUNT         3065 a         4926 c         5166 g         3271 t
ORIGIN      
        1 tggtgtcgtt gcagaagatc gacgtcgcgg cggccgtcat cgcatccatc atggtggctg
       61 gccttgcggt attcttccag aacactcgga tcgggcgcgc cttgcgggcg gtcgccgaca
      121 accacaaggc agcgctttcg gtcgggattt cgctggagca gatctgggtc gtcgtgtggt
      181 tcgcggccgg cgtcgtggcg ctggccaccg gcatcatgtg gggtgcacgc tccaacgtct
      241 ccttcgcgct cgaaatcgtt gctctcaaag cgctgccggt gctggtgttg ggcggtttca
      301 cctcggtgcc gggcgcgatc gtcggcggca tcatcatcgg ggtgagcgag aagctcggcg
      361 agttctactg gggtccgctg ttgggcagcg gcatcgagag ctggctcgcc tatgtgatcg
      421 ccctcgtctt tctgctggtg cgacctcaag gcctgttcgg cgaaaagatc atcgagcggg
      481 tttgaagatg ctctatcgtg aaaccgggca attcaagaca agctacgcgg ccgatgccgc
      541 ggtattcccg atcctccagg atcgcatcgg catcgcgatc atcctcatcc tcgccttcgc
      601 ggtcgtgccg ctcgccttct caagcttttc gattagcacg gttctgatcc cgatcctggt
      661 attttcgctc gccgcgatcg ggctcaacgt gctcaccggt tatgccggac agatttcgct
      721 cggcaccggc ggcttcatgg gcgtcggcgc ttacacctgc tacaagctta cgactttgtt
      781 tcctgacgtg aacatcattg tgttgatcgt cttgtcgggt tttgctgcgg cggcgattgg
      841 aacgctgttc ggcctgccgt cgctgcgcat caagggcttc taccttgccg tcacgacact
      901 agcggcgcag ttctttctgt cgtggtgctt cgtacgtgtg ccctggctgt ataactacaa
      961 cgtttccggc gcgatcgagg taccgacccg aaccatgttg ggcatcccgg ttaccggtcc
     1021 caatgccacg ccagcaacgc gctacctcat cgtgctgtcg ctggtcgtcg cgatgacgtg
     1081 gatcgcatcg aacctcatcc gcggccgcat cggccgtatg tggatggcag tgcgcgacat
     1141 ggatatcgcg gctgagctga tcggcgtccg gttgtttcgc accaaactca tcgcctttgc
     1201 ggtgtcgtcg ttttattgcg gtgttgcagg cgccatgatg gtgttcctgt ggttcggcgc
     1261 cgcggaagcc gacagcttca atatcgatct atcgttccgc atcctgttca tggtgatcat
     1321 cgggggcctc ggcagtctga tcggttcgtt tttcggtgcc gccctgatct ggggcctgcc
     1381 gatcgtgctg cgtggtctac ccgatctcct cggtgtgtcg attcgcgccg cgaccgttga
     1441 acaccttcag ttcatgatcg tcggagcctt gatcatcttc ttcctggcgg ttgagccgaa
     1501 tggccttgcc cggctgtggc agatcggaaa gcagaagctg agggtgtggc cattcccata
     1561 ttaaaagggc aatatccatt ggaacgaatc agccgccggc ggagcaatgt gccggagaat
     1621 ggtaaactcc cagaaggcgg agatcttcgg ggcgtagcgg gacaccggcc gcgcaggtgc
     1681 cgggccggat ggaaacaatt caaggaggac gcaatgcgcg tcgcgcacat cgttctagga
     1741 ctggcattag cgacgagttc gggtgtggcc gttacggcgg tccaagccca ggacagtatc
     1801 tatgttccgc tgctaactta tcggactgga ccatttgcgg gctccggcat tccggtcgcc
     1861 aacgggctgc acgattactt gagcatgctc aatgagcgtg acggtggcat cggcggtgtt
     1921 aagctcgcga tcgaggaatg cgagaccggc tacgacacca agaagggcgc ggagtgctac
     1981 gaggccgtta agggtaagat gccggtcatc atgaatccgt ggtcgactgg aatcacactc
     2041 cagctcattc ccaaggcgtc ggtcgacaag attccgatcc tgtcgatggg ctacggtctg
     2101 tctgcctccg ccatcggcaa agactttcca tggattttca atccgccggc gacatactgg
     2161 gacggcctgt cgatgatttt caaatacatc ggcggcaggg agggcgggct agaccagctc
     2221 aagggcaaga caatcggata catctttttc gaagggggct atggtcgcga gccgatcccg
     2281 ttgctggagc aattcgcaaa ggactacggc ttccaggtca agatgtatcc ggtcacggtg
     2341 caggagatgc agagccagtc ggcgcagtgg ctcagcgtgc gacgtgatcg accgagctgg
     2401 atgatcatgt gggggtgggg cgccatgaac ccgaccgcca tcaaggaggc caccaagatc
     2461 ggtttcgcga tggatcactt catcggcatc tggtattcgg gcagcgaaga cgatacgcgc
     2521 gccgtcggcg cggaagccaa gggctacacc gccctcaatt tcaaccgcat cggggcgggc
     2581 tttccggcga tccaggatat cgtcaaatac gtcgtcgaca agggcctgag ccaggttgcc
     2641 aaggaaaaag tcggcgagaa ttactataat cgcggtgtct acaattcggt gctgatctcc
     2701 gaggcaatcc gcaacgccca gcgcatcacc ggcaaaaagg tcgtcactgg cgaggacgtc
     2761 cgccgcggcc tcgaagccct cagcatgacc gaggcgcgat ggcgggagct tggcttgcct
     2821 gggtttggcg gcgcgatcac cggcgtatcc tgcactgacc acaatggcca tcagtcggcc
     2881 tacatgcagc aatgggatgg tgcgaagtgg atcgtggcat cggattggat cagccccatg
     2941 aaggaccgcg tgcgtcccct gctggaggct gcggccaagg agtatatatc caaggaccca
     3001 gcgtggccga agcgcaccga gccttgcgac aaatcatcgt gaatgctggc cgtcaacaac
     3061 attgaggtgc tctacgaccg cgtcatcctt gtcctcaagg gcgtatcgct cgcggtgccg
     3121 cgtggcggca tcgtggctct gcttggggcc aatggagccg gcaagaccac gacccttaag
     3181 gcgatctcca acttgctgcg tgccgagcgc ggcgaggttg ccaaaggcac catcctgttc
     3241 gacggtgccg aggtgcaggc gctgtcgcct agcgaagtgg tgcgtcgcgg ctgcatccag
     3301 gttatggagg ggcggcactg cttcgcccac ctgacgatcg aggaaaatct tctgaccgga
     3361 gcctttacgc gtcgtgacgg cagcgccgcg atccgccgcg acctcgacct cgtctattca
     3421 tattttccgc gattgcgcga gcggcgcgct gcgatcgccg gttacacctc cggcggcgaa
     3481 cagcaaatgt gtgccatcgg ccgtgcgctg atgtcgcggc ccaagatgat cctgctcgac
     3541 gagccctcga tgggacttgc gccgcaaatc gttgaggaga ttttcgagat tgtcggcaat
     3601 ctcaatgcca aggaggcggt gtcgttcctc cttgccgagc agaacaccaa catggcgctc
     3661 aaatacgcgc gttacggcta cgttctggag aacggccgag tggtcatgga tggcgaggcg
     3721 aaatcgcttg ccgaaaacga ggacatcaag gagttttatc tcggcatcgc ggaaggcaag
     3781 aagaagtcat tccgcgacgt gaagcactat aagcgccgta agcgctggct gatgtgagcg
     3841 cagatatggc gcaagcgtat tacgacgagc ttgaaatccg cgacgccgca ggacgtgaaa
     3901 gtgagcaatt cgcccgcctg ccggacattg tggctcgcgc cttcacggcc cccggttggg
     3961 cgcgtcggct cgaaggcgtc gatcctgcat ccgtcgccaa tcgctcgggt ctcgcaaagc
     4021 tgccgttgct acgcaaatcg gagctgcctg cgctgcaaca ggccgacccg ccgttcggcg
     4081 gcttcaaact gacaccgccc ggtaaggcgc gccgcctcat gatgtcgccc ggcccgatct
     4141 tcgagcccga atgcgaaagc cctgatggtt acggtaccgc gcgcacgttg tttgccagcg
     4201 ggtttcgatc gggcgatatc gtgcacaacg ccttctccta tcatctcacg ccgggtgcgt
     4261 tcatcttcga gtccggcctt catgcactcg gctgcgccgt tatcccgggc ggggtcggca
     4321 ataccgacca gcagcttgag gccattgcgc acttcaagcc ttcaggctat gcgggcacgc
     4381 ccgatttcct gaaagtcctg ctcgacgggg cggaaaggtc gggcaagaat gcctcttcgc
     4441 tcaagcgcgc gctcgtctcc ggtgcagcgc tgcccgctac attgcgtcgg gaacttggcg
     4501 cacgcggggt tgatgtgctg cagtgctacg ccatcgcgga ggtcggcgtc attgcctatg
     4561 agacagcggc ccgcgacggc atggtggtga acgagcacgt catcgtggaa atcgtgcgcc
     4621 ccggcactgg cgatccggct cctgacggcg aggtgggcga agtggtggtc acctcgtttg
     4681 ctcctgatta cccgatgatc cggcttgcca ccggcgatct ttccgccgtg ctcccaggtc
     4741 cttcgccctg cgggcggacc aacctgcgga tcaagggctg gatgggccgc gccgatcaga
     4801 ccaccaagat caagggcatg tttgtctacc ctgctcaggt ggccgaaatc ggcaggttgc
     4861 ataaacaact cggcaggctt cgcctggtcg tgacccgggc cggtgagcag gacgtcatca
     4921 tcctgatggc ggagtgcgca gcggcgccgg aaggcctcga ggcggtggtt gcggcgacgc
     4981 tccaggcggt gaccaagctg cgcggcgagg tcaggctggt ggcagccggc gttttgccga
     5041 acgacggcaa ggttattgcc gacgaacgag ggggcgcatg aacgtctgtc gcccagggca
     5101 tttttcgatt aggttgcggc cagcatgaac gaggtcccga atcacgctag tttcgcccaa
     5161 cgcccggccg atcatccaaa gatccagtct ggatcggtcg gcgtgctggt ggtcaacctc
     5221 ggcacgccgg acgccaccga cgcccggtcg gtacggcgct atctacgcga gttcctgcat
     5281 gacaagcggg tgatcgagga aaactcgctt gtctggaagt tcgtgctcaa cgccatcatc
     5341 ttgccgctgc ggccgcggcg caaaggtctc gattacgaaa agatctggaa ccgggaacag
     5401 gatgagtcgc cgctgaagac gatcacgcgt tcccaggccg acaaactcgc cgccgcgctt
     5461 tcgctaggcg gcaaacgggt cgtggtcgac tgggctatgc gttacggcaa tccctcgatt
     5521 cggtcccgtt tagcggcgct ggtggcgcag ggatgcgaac ggattctggt ggtgccgctt
     5581 tatccgcaat acgccgccgc caccagtgcg acggtgtgtg acgaagtgtt tcgcgccctt
     5641 atgggtatgc gttggcagcc cgcgctgcgc gtcgcgccac cctatttcga cgaaaccgcc
     5701 tatattgaag cggtagcggc ctcactcgaa gcccatttga agacgctgac attcacgcct
     5761 gacgtgatta tcgcctcatt tcacggcatt ccaaaaagct atttcgacaa gggcgatcct
     5821 tattactgtc actgcgcgaa gaccacccgg ttgctgcgcg aacgattgcg gctcgacgac
     5881 aacgggctga tgatgacgtt tcaatcgcgg tttggtcggg ccgaatggct caaaccctat
     5941 acggatacga cagttaagga attggcggcg cgcggggtga aaaatctggt tgtcgtcacg
     6001 ccgggcttct cggccgactg tctggaaaca cttgaagaga tcgccggtga gaacgccgaa
     6061 tacttccgcc atggcggggg cgaaaatttc gccgcagttc cctgtctcaa cgacagcgag
     6121 ccgggcatgc gggtgatcga ggcggtggta ctgcgcgaat tgcagggctg ggtgtaatcc
     6181 agcatgctgg aagcgctcca cagggggagt ctacaaatgt ttgggggcta cgacatcttt
     6241 gtcctcatcg tcgtctttct ggccattctc acggttttcc ttggcgtcaa aacggtgccg
     6301 cagggctata attggaccgt cgaacgcttc ggtcgctaca ccagaatgct aaggcccggc
     6361 ctcaatttgg tggtgccatt tgtcgatcgg atcggtcgcc ggatgaacgt gatggagcag
     6421 gtgatggatg ttccccaaca ggaggtcatc accagggata acgccagcgt cacggtggac
     6481 ggcgtcgtgt tttttcaggt gttcgatgcc gctaaggcaa gctacgaaat tgcggctctc
     6541 gatcaagcca tcatcaagct caccatgacc aacatccgtt ccgtgatggg cgccatggac
     6601 ctcgatcaaa tgctgtccca tcgcgacgaa atcaacgaac gcctgctgcg cgtcgtcgac
     6661 gcggcggcat cgccctgggg tatcaaggtc aatcgtatcg aaatcaagga tatcatcccg
     6721 ccggaggacc tcatccagtc gatgggaagg caaatgaagg ccgagcgcga aaagcgtgcc
     6781 gaaatattga ccgcggaagg ccagcgacag tccgcgatcc tcaaggcgga gggcgccaaa
     6841 caggcgcaga ttttggaggc cgagggccgc cgggaggccg cctttcgtga cgccgaggcc
     6901 cgtgaacgtt ccgcttcggc cgaggccaag gccacggagg tcgtgagcca ggcgatcgcc
     6961 aagggcgagg tcgctgcgat caactatttc gttgccgaca agtatctgcg cgccctcacg
     7021 gagattgcac attcgccgaa ccagaaagtt atactgcttc cctttgaggc gactagcgtg
     7081 cttgccacgc tcgggggcat tgcggagatc gccaaggcga cgtttgcggg gactccgagc
     7141 actcccgaag cgagcgctcc accaccacga ccagccatac cggccattcc ggcgcaagag
     7201 ccgccgagtt gaggaatttc catgttgacg ctgatcgcct cgcttggagc atgggattgg
     7261 ttcatcgccg gcggattgct gcttgtgctc gaagtgctgg cgccgggtgt attcatgcta
     7321 tggcttggtc tcgcggcgat gctggtcggc accatttcgt tgtacttcga ttggtcgtgg
     7381 caggcgcaat tcatcgcctt tgcggtattt tccgtttcgg cgatcccgtt atggcgtcgg
     7441 ctcgagatgg agggcgaggc gactacagac cagcctttcc tcaatcgtcg cgctgaggcc
     7501 cttatcggtc gcactttcac gctggaaaag ccgatcgtag ataattccgg cacggtgcgg
     7561 gtcgacgata ccgtgtggcg cgtcaccggg gccgatgtac cggctggcag ccgcgtcaag
     7621 gttacacggg tcgacggagc tgcgctctac gttgaggcgg tcggtaatca gtaagaaagc
     7681 gcctgttatg attactgatc ctgatcacgc cacacccgcc ctcagcagat cgtgcatgtg
     7741 aacaagcccg acagcacgct cgccctctgc cacgaacaaa acggttcgct tcagggagtt
     7801 gagaatttcc acagcttcgc tggcaagttg gtcgggacgc accgtcgtcg gccccttggt
     7861 catgacgtcc tcgacccggg catggagcaa gtccggccgc atgtggcgcc gcaggtcgcc
     7921 gtccgtgatg atgccgacga gatgcccagc cgcatcgttg atgccgacac agccaaagct
     7981 tttcgcggac atttccacga tggcatcgga catcttggta cccatcggct tgagcggcat
     8041 ttcaggcccg gtatgcatca ggtcgcggac gaaggtcagt gcggccccga gccgcccccc
     8101 cgggtgcagg acgcggaaat cgaggggcgt gaagccacga ctttccaaga gcgcaatcgc
     8161 aagtgcgtcg ccgagtgcaa gctgcatcag cgaagaggtg gtgggggcca gattgtgcgg
     8221 gcaagcttcg cgtgcctgcg gcagcactaa ggcgagatca gcggccttgc ccagcgtact
     8281 cgccgcatcg gccgtgatag cgatcagacc gatgcggaac cggcgcgaat aatcgatcag
     8341 gtttttcagc tcggcggttt cgcccgacca cgacatcgcg atgatgacat cgtccgatgt
     8401 gatcatcccg agatcgccgt gactcgcttc ggctgggtgg acgaaaaacg cgggcgtgcc
     8461 ggtggacgaa agggtcgcgg cgatcttgtt gccgatgtgg ccggacttgc ccatgccact
     8521 gacgatgaca cggccgcgcg ccgcccggat catggcgatc gcggtgatga aggcccgtcc
     8581 gaggccattc gcgatcgcgg cgctgagcgc catgagcccg ccggactcgg cttccagcgt
     8641 ccgcagcgcg caggcgatga gtgcaagttc actctcgctc aagggctggt cttcgctgcg
     8701 acatatcaat ttcggcatgg ctcgtcgtga aggcatccgg ccgcagttag aacattccca
     8761 atgtctagca cagcgttctc gaagttcgcc atgccaatac ggagcggtgg cggcgggcac
     8821 gctttgcgtt gcccatccat gtcaggatgg ccacccgccg aaccgctatc ccagcagcga
     8881 cttgatctcc gcccggagcg ccggcgcgat gtcgtcgcgc gccagcgcat aggcgatgtt
     8941 ggcggcgagg aaaccgatct tgctgccgca atcgaagctg cggccttcga atttgagccc
     9001 gtagaatggc tgttcctggg cgagccggat catcgcatcg gtgatctgga tttcaccgcc
     9061 ggcaccgcgg gcctggttgg ccagaatttc gaaaatcttc ggctgcaaga tgtagcggcc
     9121 ggtgatgatg aggttggagg gcgcttgctc gcgcggcggc ttctcgacca tctgggtgat
     9181 ctcgaaagct tggcctttcg attttccgac ccccaccacg ccgtacatat ggacgcggtc
     9241 catcgggact tcctcgaccg caatgatgtt gggatggccg gggagctggc ggtaggcatc
     9301 cagcatttgc gtcaggcaac tgcgttgcgc ctgcaccagc acatccggca gcagcagggc
     9361 gaacggctca tcgccgacga tttcacgcgc gcaccacact gcatgcccga gccccagcgg
     9421 ctgttgctgg cgggtgaagc tggtctggcc ggcgcccggc aaatcttgcg ccaggagttc
     9481 cagttcggtg cggcgattgc gctccgtcag ggtcaattcg agctcgaact gccggtcgaa
     9541 atggtcctcg ataacgccct tgttacggcc ggtgacaaaa atgaaatgtt cgatgccggc
     9601 ttggcgggcc tcatcgacca catgctggat cagcgggcgg tcgacgaccg gcagcatttc
     9661 cttcggcatc gccttggtgg cgggcaggaa acgtgtacca aggccggcga ccggtaagat
     9721 ggctttgcga ataggcgtca tataggagat gcgggcaatg tggttgatca gacttgcaat
     9781 cggagcagcg gtcacccgcc gcggccaagt gggaatcact gtggcacacg ggagtcaata
     9841 gcaaaatgca ccctgcgtcg atgccacatt tgtgtaagaa caaagatttg atgcgttaag
     9901 cctccgttaa tcagatttga gtgccaatac gccgtatggt aggggggcgc tcgggtgcgc
     9961 ggctgttatg cgggagcata gcgatggtcg gctcgaagtc gctgtttggc gtgctgtgcg
    10021 tggccggcgt tttggccggc gcgacaggct gtgcgacggc gcagatcatt gaacggctgt
    10081 ttccgtttct cgcctcaacg gctccgaccc cgactgcccc agccgcaacg gattcggcgc
    10141 caaatccaca ggtttccggc acgcccgaat ggagcggaca atccggcagt tccggccatc
    10201 cgctgatgac cgcggacgcg atccttgcgg ccgcggcgaa ttttaacggg tgcctggaag
    10261 gcctgtggct ggatgccgcg cgactcggca ttgcccgcgc aaccttcgat acccacacga
    10321 gcaatcttac ccccgatctg cgcatcatgg acctgatgga tgcgcagccg gaattcacca
    10381 aggccttttg ggactatctc gatgtgctgg tgaatgacag ccggatcaag cgtggtcgcg
    10441 agattttggc gcaacatcgc ttggtgtttg acgcgatgga aaaggcctat ggggtcgacc
    10501 gccatatcgt ggcggcgatc tggggcgtcg agtcgaattt cgggacctcg ggaggcgatc
    10561 gaccggtgat ccggtcgacc gcgactttgg cgtgtgtcgg ccgccgccag gactacttcc
    10621 gcaacgagtt cctcgctgca ttggaaatcc ttgatcgcgg cgacgtcagt ccggatcgtc
    10681 tcaagggctc gtgggccggc gcgtttggtc cgacacaatt catgccgacc tcattcaagc
    10741 gctttgcggt cgatttcgac ggcgacggcc gccgcgacgt ggtcgattca cccgccgatc
    10801 tcatcggatc cacggccaac aacctcaagt cggatggatg gatcccgggc cagacctggg
    10861 gatacgaggt gaccctgccg gccggtttca acttcctcct ggccgacggc gctaagccgc
    10921 tgacgatgcg tgaatgggag cggctgggcg tgacccgact gagcggcaga ggttatctgc
    10981 gggcgaccga ccgggcctat ctgttggtgc cggccggagc gaatgggccc gcctttctga
    11041 tgctcaacaa tttccgcgtg ctgatgaaat acaacccggc ggaagcttat gctttggcga
    11101 tcgggcatct ggccgaccgg atgcggggtg acgggccgat cgtcgccgcc tggccgcgtc
    11161 acgaaagggt gcttaccagc gccgaacgct atgagttgca gcaacacctg gtgcgccacg
    11221 ggttcgacat cgggggtgag cccaacggtc gcatcaatgc caaatctcgt agcgcgatca
    11281 aaagctttca ggtttcgcag ggtctcgttc cggatggctt cgcatcagcc ggcatgctgg
    11341 agcgcctgcg ccagccatag agttcccatc cgttggaaat ccaacatgga cactcgcggt
    11401 cttcaatccg acgccttatc tgtgttagta acggtgcgct gggaacagat cacttgcggc
    11461 cggggggttc ccccgactgc gcagcacgat cggaaaattc gggatggtcc gcggcgcttg
    11521 ctttcggatt ttgattgcca cctccttgct cgcggcggaa gcgatgttgg caatcaccat
    11581 gctggtgctt gctccggcac cctcaaacgc gcagttcttt gagtttccgt ttcagaaccg
    11641 ccggcagcgc ggaccgttcg attggttcga cccagcccca cagcagcagc cggcgccggc
    11701 gccgccgccc gtggactaca ccaaggcgcc cgctccgaag aaacccgatt ccaaagcgga
    11761 aaacacggtg acgactccga tcctggtgct cggcgactcc atggcggact ggctggccta
    11821 tggccttgag cttgcatatg cggaagcacc agagatcggg atattgcggc ggcatcgtac
    11881 gaattccggc ctgatccgca ccgaggtgcg cagcgacccg cgcggggaat atcctgattg
    11941 gccgccggct gcccgcgaat tgattgcgtc gcagaagccg aaattcgtgt tgatgatgat
    12001 cggaatcaac gaccgccggc agatccgcga agccgttcag gtcgctgcgg cctcgcgccc
    12061 cgtgaaaccg gctctgccgc gggcggacga tccagcggca ttggaactcg acaagtcgag
    12121 cgcggacaag cccaacgaaa cgcctgccgc tgcggcaccc gagtccgcga ctcctgccgg
    12181 caacaggaat ttggaattcc gctccgatgc atggagcgaa gcctatatcc ggcgtatcga
    12241 cgacaccatc acggccctga aaacgtctgg ggtaccggtg ttctgggtgg ggttgccgcc
    12301 gttgcgtgga cagaagtcgg ccgccgacat cccatttctt aacgagctct atcgcagccg
    12361 ggctgataag gcgggcatca tctatatcga tgtatgggac ggcttcgtcg acgaggaggg
    12421 ccgctatgct caatccggcc cggatgttga aggtcagatc cggcgattgc gcaccagcga
    12481 tggcgtctac ttcacccagg ccggcgcccg caaacttgcc cattatatcg agcgcgaggt
    12541 gcaacgttgg ttgagcacac gggctgctcc cgtggccgta acaatcccgg aggaaccgaa
    12601 agtcgatccg gcggtcgctg gccgcccagg gtcacaagtg cggccgctag ccgggccagc
    12661 cgtaccgtta atcgctgggc gaggcagcga aaccgatgat cttctgggcg gcaatgcccg
    12721 ccagccgccg agcgacgcga tggtgacgaa ggtgctagtg aggggtgaac ctgtgcaagc
    12781 gccggccggc cgcgccgacg acttcgtttg gccgcggcgt ggagtcgctc cggtcggcag
    12841 cgatcctgtg gttgcgacca ccgatctgcc catgactccg atgttggcgg atcgtagcgc
    12901 ggcgaccaca gctacggctg cggcggcgcc atctgggcag tccggcggtg cgactgcgca
    12961 ggctgcacgc cgctcggcgc cgcggcagac ctttgcggaa atgcagcagt cacagtcgat
    13021 ttatcggccc gactaccggc gcccggcggc cccgccgcaa ttcaacttcc catcgttgtt
    13081 cggcggcggt ccatccctgt tcggcggtcc acctctgttc ggcagacgat gatcaacgcc
    13141 gcgcgaaagg tgtggtgttc cggcacgaaa ttttatgtcg gcaatgtggt ggcgcccatc
    13201 aggaacttgt cgaccgcatg agcggcttgt cggccctccc gtatagccca caccacaagc
    13261 gactggccgc gccgcatgtc cccggccgca aatatcttgc tgaccgaact gacataatga
    13321 attgtatcgg ccttgacgtt gccgcgcgga tcgagtgcaa ggccgagctc gtcgatcatg
    13381 ccctcgtgta ctggatgcac gaatcccatg gcgagcaata cgagatcggc cggaagttcg
    13441 aattcggtcc cgggaatggg tttgaaattc tggtcacaac gcgtgcagcg cagccgcttg
    13501 accgagccgc cttcgccgat gaattccgtc gtcagcacag cgaaatcgcg ctccgctccc
    13561 tcttcatggc tcgatgacgt gcgcagcttg agtggccagt cgggccaggt gagggccttg
    13621 ttttcctttt cgggcggctt cggcatgatc tcgaaattgg tgaccgaaag cgcaccttgg
    13681 cggattgagg tgccgataca gtcggagccg gtgtcgccgc caccgatcac caccacatgc
    13741 ttaccggtcg cgaggatcgg cacgacgccg tcttgcggct cgttgtcgat gcgccggttc
    13801 tgctgcggca gaaattccat cgcaaagtgg atgcctttca gatcgcggcc gggaatcggc
    13861 agatcgcggc ttttttcggc gccccccgcc agcaccacag catcgtgccg agcgacaagc
    13921 tcggttgaag ccagatcgac gccgacgtgg acgccgcaat ggaaatgcac gccttcagct
    13981 tccatctgga cgacccgacg gtcgacgaga tgtttctcca tcttgaaatc cgggatgccg
    14041 tagcgcagca gcccgcccgg cttggcattt ttttcataga cgtggacatc gtggccgacg
    14101 cgcgcgagct gctgggcgca ggcgagaccg gccgggcccg accccaccac cgcgactgat
    14161 ttgccagtct ttcctgacgg cggctccggt ttcacccagc cttgctcgaa tgcgcgatcc
    14221 gcgatcgcgc attcgatggt cttgatggtg acgggattgt cgtcgatgtt gagtgtgcac
    14281 gatgcttcgc acggtgccgg acagacgcgg ccggtgaact caggaaaatt attggtcgca
    14341 tgcagattgt gtgaggcctc ctgccatgcg cccgtataga cgagatcgtt ccagtccggg
    14401 atctggttgt tgactggaca tccggtgtga caatacggga tgccgcaatt catgcaacgc
    14461 gccgcctgtt gacgcgtttc ggcctccggc aacggcagaa cgaattcgcg ccaatgacga
    14521 acgcgcgcct cgaccggttc ataatcgcgg tcattgcgct cgaattcgag aaaaccggta
    14581 actttgccca ttcgatccaa acctcgtatc ctggttgcgg tccagcaatc caggatcagc
    14641 gcatcgcccg tagaataggc catccccgaa tttcgctgcg ctccatccgg gcgacacgga
    14701 agcgatgtgc cagcataacc tgtatgatcc atcctgcgcg ctaaacgcgc tgcggctgcc
    14761 cggctttact ccgccgcttc catcttggcg gctttttcct ttgcgagttc cgccagcgcg
    14821 cgccggtatt ctaccggcat cacctttcga aacttcggca ggaacgcatc ccaattcgcg
    14881 ataatctgcg cggcccggcg cgaaccagca aatcgggcat ggcgtgagat caaaagatgg
    14941 agccgcgcgg catcgtaacg ggtgaggtcg gacatgatgt cgatgcgacc atggccgtcg
    15001 agatcgccgg cttgatgata cgccgtggcg tcgatctcct cctcgagcaa gggctcaagt
    15061 tcgaccatcg ccaaattgca cagcgtcggg aatgcaccat cctggtcgag cacataggcg
    15121 atcccgcccg acatgccggc tgcgaaattc cgtccggtgt tgccgagcac gaccacgatg
    15181 ccgcccgtca tgtattcgca gcagtgatcg ccagcaccct cgaccaccgc gatggcaccg
    15241 gaattgcgca ccgcgaaacg ctcacccgca atacctcgaa aatagcactc gcccgaaatc
    15301 gctccataaa gcacggtgtt gccgacgaca atcgaatact cgggcgtaac gcccgagttg
    15361 atgggcggac ggacgataat gcgtccaccc gacaggccct tcccaacata gtcgttgccc
    15421 tcgccttcaa gttcgagggt gatgccgcgc gcgagccagg caccgaagct ctgcccggcc
    15481 gttcccgtca gcttgacgtg gatggtgtcg tccggcaggc cggcgtgacc atagcgcttg
    15541 gcgatttcgc ccgacagcat tgcaccgacg gcacgatcgg tgttcttgat ggtcgtcaca
    15601 atccgcacgg gggcgccgcg gtccagcgcc ggttgggatt cggcaatcag tcgacgatcc
    15661 aatatgttgt ggatcttgtg gtcctgcggc tcgcacttga atatctttac gtcgcgcggg
    15721 gcatccggct tgtagaacag cttggagaaa tcgagccctt tcgccttcca gtgggcgatg
    15781 acgcggcgct gatcaagcat ctgcatttgc ccgatcatat cgtcgaagta gcggaagccg
    15841 agctcggcca tcagttcgcg cacttcctcg gcgacgaaaa agaaaaagtt gatgacgtgc
    15901 tcgggctggc cggtgaagcg cttgcgcagc accggatctt gcgtagcaac cccgaccggg
    15961 caggtgttga gatggcattt gcgcatcatg atgcaaccgg ctgcgatcaa gggcgcggtc
    16021 gcgaagccga attcgtcagc gccgagtaag gcaccaacca caacgtcgcg gccagtgcgg
    16081 atgccgccgt cgacctgcac ggcaatgcgg ctgcgcaggc gattggcgac aagcgtctgg
    16141 tgggtctcgg caaggccgat ctcccaaggc gatccagcgt gcttgatcga cgtgagcggc
    16201 gatgctccag tgccgccttc gaagcccgca atggtgacgt gatcggcccg cgccttggag
    16261 acacctgccg ccacggtacc gacgccgacc tcggacacca gcttgaccga cacggcgccc
    16321 gcgggattga cgttcttgag gtcgaagatg agctgcgcga ggtcttcgat agagtagatg
    16381 tcgtgatgcg gcggcggcga aatgagaccg acgccgggcg tcgagtgg
//
LOCUS       DATILV010000530         1643 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3195185, whole genome shotgun sequence.
ACCESSION   DATILV010000530 DATILV010000000
VERSION     DATILV010000530.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1643)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1643)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1643
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3195185"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..519)
                     /locus_tag="VLJ17_12185"
     CDS             complement(<1..519)
                     /locus_tag="VLJ17_12185"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HSV23772.1"
                     /translation="MKNELRISRIAAALLVGLAVQAAAFAQDKARKIDDLVARYHSFG
                     QFNGAVLAADNGKVIYKKGVGLANMEWNIPNEPDTKFRLGSITKQFTAALIMQLVEQG
                     KLKLDGKVSDYLPDYRKDTGARMTIHQLLSHTSGVPNYTAAPGFFENVSRNPFKVDDF
                     VKKYTSGDLEFEP"
     gene            793..>1643
                     /locus_tag="VLJ17_12190"
     CDS             793..>1643
                     /locus_tag="VLJ17_12190"
                     /inference="COORDINATES: protein motif:HMM:NF013665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase"
                     /protein_id="HSV23773.1"
                     /translation="MSILENIRERAANNLQHIVLPEGNDPRTVAAASACVRQRLARIT
                     LLGDAGAIRELAQTQSIDLGGVEVIDHRRAPDFEKMIALLHELRRAKGMTADEAHTAL
                     KDPLYYANLMVRTGKADGSVAGATNTTSHTVRTALHCIGVRAGFKLVSSFFLMSLGRP
                     DFGSDGAMIFADCGVVIEPNAAELAEIALASADSCRALLGIEPRVALLSFSTKGSAKH
                     KLIDKVVEAVRTVRARAPELDIDGELQADAALVPAIGQSKAPGSSVAGRANVLIFPDL
                     QSGNIGY"
BASE COUNT          339 a          472 c          461 g          371 t
ORIGIN      
        1 cggctcgaat tccaagtcgc cgctcgtgta cttcttgacg aagtcgtcga ccttgaaagg
       61 attgcggcta acattctcga agaaacccgg ggctgccgtg tagtttggaa cacccgacgt
      121 gtggctgagc aactgatgaa tcgtcatgcg ggcgccagtg tccttgcgat agtccggcag
      181 gtaatctgaa acttttccgt ccagctttag cttgccctgt tcgaccaatt gcatgatcag
      241 cgccgccgtg aattgtttgg tgatcgaacc cagcctgaat ttcgtgtccg gctcgttcgg
      301 gatattccac tccatgttcg ccagacctac gcctttcttg tagatcactt tcccattatc
      361 ggcagccagc accgcaccgt tgaattgccc aaaactgtga tagcgagcga caaggtcatc
      421 gatcttgcgc gccttgtcct gggcaaaggc ggcggcctga acggccagac cgacgagcag
      481 cgctgcggca atgcgggaaa tgcggagttc attcttcatt ggctggactc tcctgaaacc
      541 tgatcatgat gagctcgaaa cataccaaac tttgaggcga aaaagcaggg cacacgctcg
      601 tggccagaaa acttagctgc ggttttgagc ggtgaaatca ttgacgggct ctctcaatac
      661 gaccagccgc ttaaacttgt tctctctaac agcctcggtt agactcgcct ttctgtaacg
      721 cacgctgtca gcttgcgcgc catttgaatg ccacgcagtc tcgcaaactg acagtttgcg
      781 ttgcaacacg caatgtcgat actcgaaaac attcgagagc gggccgccaa caatctgcag
      841 cacatcgttc tgccggaagg taacgacccg cgtaccgtag ccgctgcgtc tgcctgcgtc
      901 agacagcgac tggcccggat caccttgctt ggtgacgccg gcgctattcg tgaactcgcc
      961 caaactcaga gcatcgatct cggcggtgtt gaggtaatcg atcaccggcg agctccggac
     1021 ttcgagaaga tgatcgcgtt gcttcatgag ctgcgccgcg ccaaaggcat gaccgctgac
     1081 gaagcgcaca cggcgctgaa agatccactt tattacgcga atctgatggt gcgtaccggc
     1141 aaagccgacg ggtcggtggc cggggctact aataccacct cgcataccgt gcgcactgcc
     1201 ttacactgca tcggcgttcg tgcgggcttc aagctcgtct ccagtttctt tttgatgtcc
     1261 ctgggccgtc cggattttgg cagcgatggg gcgatgatct ttgccgattg cggagtggta
     1321 atcgagccga acgccgccga gctggctgag atcgcgctgg cttcagcaga ttcctgtcgc
     1381 gctttgctcg gcattgaacc gcgcgtggcg ctgctttcct tttccaccaa agggagtgcc
     1441 aaacacaaac taatcgacaa ggttgtggaa gccgtgcgca ccgtgcgcgc gcgcgctccg
     1501 gaactggata tcgatggtga gttacaggcc gatgcggcgc tggtaccagc tatcggtcaa
     1561 tcgaaggcgc cgggctcgag tgtcgccggg cgggcaaacg tgttgatctt tcccgatctg
     1621 cagtccggca acattggcta taa
//
LOCUS       DATILV010000531         3376 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_379939, whole genome shotgun sequence.
ACCESSION   DATILV010000531 DATILV010000000
VERSION     DATILV010000531.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3376)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3376)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3376
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_379939"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1428)
                     /locus_tag="VLJ17_12195"
     CDS             complement(<1..1428)
                     /locus_tag="VLJ17_12195"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HSV23774.1"
                     /translation="MSHHVGCVVATRALLGVSFAALAISAQAAEYKMTVNRDRLINSA
                     NEPQNWLMMNGDYGATRYSKLAQINRDNVKNLHMVWALALRGMQDIGQNGPENEVNPL
                     IDNGFMYTSDGWGTVYKIDVRSGDHGEFAWIADPGVKHEGNIPRSRGIALWEDLVINN
                     LPDGRVIAINRDSGEIVWDKQVAKPNEFGTKERMNSAPITAEGKVLVANGAGDGGTRG
                     WLAALDARTGNELWRWYAIPKPGEPGSETWKDKNNAWKTGGGGLWQTGSYDPINKLTV
                     WGTGNPVPQYDPQSRPGDNLYTNSAVALDVNTGKLVWHYQYLPNDSWDYDEIGIHMLY
                     DVNINGEARKVMGHFARNGFYYTLDRANGSFIKGSQYVNDLNWTKGLDPKTGKPVEYD
                     PKLDVQAYVPEARSLRGDGMKRTCPTWHGGVAHQPTAYNPVKHIAYGVGAEGCFTQNG
                     AAAAFKGPDGGLDRAKFEKRTYTSDL"
     gene            complement(1484..3250)
                     /locus_tag="VLJ17_12200"
     CDS             complement(1484..3250)
                     /locus_tag="VLJ17_12200"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HSV23775.1"
                     /translation="MRHRFGVVATVAHTAMAGASFAALALSAHAAEYKMTVNRDRLIN
                     AANEPQNWLMMNGDYGSTRYSKLAQINRDNVKNLRMVWAMALRGMQDIGQNGPENEVN
                     PLIDNGFMYTSDGWGTVYKIDVRSGDHGEFVWIADPGVKHEGNIPQTRGIALWEDLVI
                     NNLPDGRVVAINRDNGEIVWDKQIAKPNEFGGKERFRSAPIAAEGKIIVANGSGDAGT
                     RGWLAGLDAKTGNELWRWYVIPKPGDPGSETWKDKNNAWKTGGGGLWQTGSYDPVNKL
                     TIWGTGNPVPLYDPQARPGDNLYTDSAVALDVSTGKLTWYYQYLPNDAWDYDEIGIHM
                     LYDVNINGEMRKVMGHFGRNGFYYTLDRANGSFIKGGQYVNDLNWTKGLDPKTGKPVE
                     YDPKLDVQTYVPEARALRGDGMKRACPTWHGGVAHQPTAYNPVKQIAYGVGAEGCFTQ
                     NGAEFKFRGPDGGLDAKNSEKRTYTSDLYYGAITAYDVTTHKVLAKTVTDIENRSGAT
                     VTAGGLVFSALQDGWVVAYDDEKLQELWRFNVGTPLKGAPVVYAIGPKQFLAVQSSGR
                     HLHPVKYDNLEHSSYLFVFALN"
BASE COUNT          573 a         1040 c          996 g          767 t
ORIGIN      
        1 cagatcgctc gtgtaagtcc gcttctcgaa tttcgcccgg tcgagcccgc catccggacc
       61 tttgaaggca gcagccgcgc cattttgggt gaagcatcct tcggcgccca ccccatatgc
      121 gatgtgcttg accggattgt aggcagtcgg ctgatgggcc accccgccgt gccaagtcgg
      181 gcacgtgcgc ttcatgccgt cgccgcgcag cgagcgcgcc tccggcacat acgcttgcac
      241 gtccagtttc ggatcgtatt cgaccggctt gccggtcttg ggatcgagtc ccttggtcca
      301 gttgaggtcg ttgacgtact ggctgccctt gatgaagctg ccgttggcgc ggtcgagcgt
      361 atagtagaag ccgttgcgcg caaagtggcc catcaccttg cgggcttcgc cgttgatgtt
      421 gacatcatag agcatgtgaa tgccgatctc gtcgtagtcc cacgagtcgt tcggcagata
      481 ttggtagtgc cacacgagct tgccggtatt gacgtcgagc gccacggctg aattcgtgta
      541 aaggttatcg ccagggcgcg actgcgggtc gtattgcggc acaggattcc cggtgcccca
      601 aacggtgagc ttattgatcg gatcatagga gccggtctgc cacagcccgc cgccgccagt
      661 cttccaggcg ttgttcttgt ccttccaggt ctcgctacct ggctcgcccg gtttcgggat
      721 ggcataccag cgccacagct cattgcccgt cctggcatcg agcgccgcga gccagccgcg
      781 cgttccgccg tcaccggcgc cgttcgccac caggaccttg ccctcggcgg tgatcggcgc
      841 ggagttcatc cgctccttgg tcccgaattc attgggcttg gcgacctgct tgtcccacac
      901 gatctcgccg ctgtcgcggt tgatcgcgat cacccggcca tcgggaaggt tgttgatcac
      961 aaggtcttcc cacagcgcga tgccgcgcga ccgcgggata ttgccttcat gcttgacacc
     1021 tggatcggcg atccacgcga actcgccgtg atcgccgctg cgcacgtcga tcttgtagac
     1081 cgtgccccac ccgtcgctcg tgtacatgaa accgttgtcg atcagcggat tgacctcgtt
     1141 ttcgggaccg ttttgaccga tatcctgcat gccacgcagc gccagcgccc acaccatgtg
     1201 caggttcttg acgttatcgc gattgatctg ggcgagcttg gaatatcggg tcgcgccgta
     1261 atcgccgttc atcattagcc agttttgcgg ctcgttggcg gaattgatga gtcggtcgcg
     1321 gttgaccgtc atcttgtact cggctgcttg cgccgagatg gcgagtgcag cgaatgaaac
     1381 gccgagcaaa gcgcgcgtgg ccacaacgca tccaacgtgg tgactcatcg tgtcctccca
     1441 tcaatgttaa tgtctccggg ctaccagatg accaataaaa gcttcaattc aacgcaaaca
     1501 caaacaggta gctcgagtgc tccaggttat catatttcac cgggtgcaga tggcgtccgc
     1561 tgctttgcac cgcgagaaac tgcttcggcc cgattgcata gaccacaggc gcgcctttca
     1621 acggtgtgcc gacattgaag cgccacagct cctgcagttt ctcgtcgtca taggcgacta
     1681 cccagccatc ctgcagcgcc gagaagacaa ggccgcccgc cgtcacggtc gcgccggaac
     1741 ggttttcgat atctgtcacg gtcttggcta gcaccttgtg ggttgtcaca tcgtaggccg
     1801 tgatcgcccc gtagtagaga tcgctggtgt aggtgcgctt ctcgctgttc ttggcatcga
     1861 gtccgccgtc cgggccgcgg aatttgaact ccgcaccgtt ctgcgtgaag cagccttcgg
     1921 cgccaacacc ataggcgatc tgcttgaccg gattgtaggc ggttggttga tgggcgacgc
     1981 cgccatgcca agttgggcac gctcgtttca tgccgtcacc gcgcaaagcg cgagcttccg
     2041 gcacataggt ttgcacatcg agcttcgggt cgtattcgac cggtttgccg gtcttcggat
     2101 cgagcccttt ggtccagttc agatcgttga cgtactgacc gcccttgatg aagctgccgt
     2161 tggcgcgatc gagcgtatag tagaatccgt tgcgcccgaa gtggcccatg accttgcgca
     2221 tctcgccgtt gatgttgaca tcatagagca tgtgaatgcc gatctcgtca tagtcccatg
     2281 cgtcgttcgg caggtactga tagtaccacg tgagcttgcc tgtgctgaca tcgagcgcca
     2341 ccgccgagtc agtgtagaga ttgtcgcccg gccgagcttg ggggtcgtaa agtggcaccg
     2401 ggttgccggt gccccagatg gtgagtttgt tgactggatc gtacgaaccg gtttgccata
     2461 ggccgccgcc gccagttttc caggcattgt ttttgtcctt ccaggtttcg ctgccgggat
     2521 cgccaggctt gggaatgaca taccagcgcc acagctcgtt gccggtctta gcatcgagcc
     2581 ccgcgagcca cccgcgggta ccggcgtcgc cggatccgtt cgccacgatg atcttgccct
     2641 cggctgcgat cggcgccgag cggaagcgct ccttgccgcc gaactcattt ggcttggcga
     2701 tctgcttgtc ccatacgatc tcgccattgt cgcggttaat cgccaccacc cgaccatcgg
     2761 gaaggttgtt gatcacaagg tcttcccaca gcgcgatgcc gcgtgtctgg ggaatattgc
     2821 cttcgtgctt gacgcccgga tcggcgatcc acacgaactc gccgtgatcg ccgctgcgca
     2881 cgtcgatctt atagactgtg ccccagccgt cgctcgtgta catgaagcca ttgtcgatca
     2941 gcggattgac ttcgttctcg gggccgttct ggccgatatc ctgcatgccg cgcagcgcca
     3001 tcgcccacac catgcgcagg ttcttgacgt tgtcgcgatt gatctgggcg agcttggagt
     3061 accgggtcga gccataatcg ccgttcatca tcagccagtt ttgcggctcg ttggcggcat
     3121 tgatgagccg gtcgcggttg accgtcatct tgtactcggc agcatgcgct gagagggcga
     3181 gcgcggcaaa cgacgccccc gccattgcgg tgtgcgcgac ggtggcgaca actccaaatc
     3241 gatgacgcat tgcgtcctcc ctgcgttttt aaaaccctgg ccgttcgatg agcaagtcgc
     3301 attcgcgaaa tgctgttggg gccttgagtt ccgacattac acgtccgcgg agcccacgca
     3361 aagggagtgc acgtgc
//
LOCUS       DATILV010000532         4654 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2937630, whole genome shotgun sequence.
ACCESSION   DATILV010000532 DATILV010000000
VERSION     DATILV010000532.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4654)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4654)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4654
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2937630"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2057)
                     /locus_tag="VLJ17_12205"
     CDS             complement(<1..2057)
                     /locus_tag="VLJ17_12205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HSV23776.1"
                     /translation="MTGLLAGLSLPVLAGAQSVPYPTYVTGPQPNGSWVVGNGQVINP
                     AGKQVDLGIRVRAKAIALNPNLNTHTAAVLTLGASEAVEVFDTNTGVVRQNYITLGHD
                     SSGSYSGIAYSADGKHLMFSQDSSNVTIANVNNEGLLEDDTQVSVPPDNSFINCFPNS
                     PIGPYARPCGTFYTPSTSYPGGVAFAKDGKSAYALLNQNNTLTRIDLTAKPPKQGEQI
                     RVGNAPHSVLIDNNGTTAYVSNEGGRAATESDFQIYSAGTEIVADPVVGAAITGTVSV
                     VDLSSMKVTGTISTGLHPTGMAFYGRHLVVANAYSDSISVIDTTTNEVERTIDLGLPI
                     RVPGEHKPAYGAAPNSIAVDGKKGVAYVALYNANAIGVVNLRDHDRHPVMGMIPVAYA
                     PSSVVLDEANNTLIVANDKGIGTRYSFETDYGVTDYNTHQDNGTVSIVPVPDSGTLQA
                     MTKQVFQNNHWDLVENIKSASGGSPHAKPVAIPEKIGDPSLIKHVFLIIRENRTYDQV
                     LGDVTAGNGDSSLAVFGGKITPNAHKLIKRFPLLDNFYDPSRQSADGHQWISEGMAPY
                     ADDIQSPDWNRSYPGGNAGDALAYQKKGFLWSEATAAGLPVKIYGEYVEYTTFQQPNG
                     STSEPSWSEFYDDAKKFEAGLENTLYHQNTVTTFSSVPAVSNYLIKNFPTFDMGIPDQ
                     FRV"
     gene            complement(2302..3999)
                     /locus_tag="VLJ17_12210"
     CDS             complement(2302..3999)
                     /locus_tag="VLJ17_12210"
                     /inference="COORDINATES: protein motif:HMM:NF024860.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HSV23777.1"
                     /translation="MSQSSNPAAPEQVSPLLALATMFLRAGRPADAIAPLRDAALLQP
                     SNSIIHHDLGLACLEVGRVPDAIAALQRAVASNPRYADAHFRLGIALEKLGDIRGAIV
                     AYDRATKLLPSLAEAWFRAGALVYTLGHREEAIGCFRRAAATAGKTSYGRLGKARALL
                     IEDRNKEAERVLREALVADPENAMAYDLLGNLLSDFGRFDEARACFERAIAIAPLLAG
                     SYYDLVRCRPVTSDDHGLLQRMEAALATPGLEPAQLLRLHLAIGKAADDLGDYPLAMH
                     HFDAADAVRRGSASFDSTAFSIEIDRMIARCTPEWIARAPELGSCDPTPVLIIGMPRS
                     GTTLVEQIVSMHPEVRAGDELNFWNESGAVWHRSGGAGNEMPFLSKAVSDYLRVLRAI
                     APTAARVTDKMPFNFLWAGLIHVAFPRAIIIHCRRAPVDTALSIHQTHFHPGLAFPTG
                     GAELVAYFRSYQRLIEHWRSVLPTDRFIEVDYEDLTRAPEPVIRRIIAACGLTWHDAC
                     LRPECNPRAVKTPSKWQTRQPIYRTSVARWQRYEPWLGPLRALVDDRSKPDAGIARS"
     gene            complement(4207..4374)
                     /locus_tag="VLJ17_12215"
     CDS             complement(4207..4374)
                     /locus_tag="VLJ17_12215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23778.1"
                     /translation="MTLVFDEPVLPVTKDPEGVFRAGNKMRLLKLGASLAAAKLADDA
                     VDGAIGATKAR"
BASE COUNT          888 a         1362 c         1460 g          944 t
ORIGIN      
        1 tcgacgcgga actgatcagg gatgcccata tcgaacgtcg ggaagttctt gatgaggtag
       61 ttagacacgg ccgggacaga ggagaatgtc gtgaccgtgt tctgatggta gagcgtattc
      121 tcgagcccag cctcgaattt cttcgcgtcg tcgtaaaact cgctccagct aggctcgctg
      181 gttgacccgt tcggctgttg gaacgtcgtg tactcgacgt attcgccgta gatcttcacc
      241 ggcagaccgg cggccgtcgc ctccgaccaa aggaagccct ttttctggta ggccagcgca
      301 tcaccggcgt tcccgcctgg atagctccgg ttccagtcag gcgactggat gtcgtcggcg
      361 tacggcgcca tgccctcgga gatccactgg tgaccgtccg ccgactggcg gctggggtcg
      421 tagaaattgt cgaggagagg gaatcgctta atcaatttgt gggcgttggg cgtgatcttg
      481 ccgccaaaca ctgccaatga cgaatcacca ttgccggcgg tcacgtcgcc taagacctga
      541 tcataggtgc ggttttcacg gatgatcagg aagacgtgct tgatcagcga gggatcgcca
      601 atcttctcag ggattgcgac aggcttggca tgcggggacc caccggaagc agatttgata
      661 ttttccacca gatcccagtg gttgttctgg aaaacctgct tcgtcatcgc ctgcaacgtc
      721 ccgctgtccg gcacggggac gatgctgacg gtgccattgt cctggtgggt attgtagtcg
      781 gtgacgccgt agtcggtctc gaacgaataa cgcgtcccga tgcccttgtc attggcaacg
      841 atgagcgtgt tattggcctc gtccagcacg accgagctcg gcgcataggc taccgggatc
      901 atgcccataa cgggatgcct gtcgtgatct ctgaggttga ccacaccgat cgcgttggca
      961 ttgtaaaggg cgacgtaggc aacacccttc ttgccatcga cggcgatcga gtttggcgcg
     1021 gcaccatagg ccggtttatg ctcgccgggt actcggatcg gtagcccaag gtcgatcgtc
     1081 cgttccacct cattggtggt cgtgtcgatc accgagattg agtcgctata ggcattggcg
     1141 accaccaggt gccgtccata gaacgccatc ccggtcggat gcagaccggt cgagatggtg
     1201 cccgtcacct tcatcgagga cagatccact acagaaaccg taccggtgat cgcggcgccc
     1261 acgaccgggt cggcgacgat ttcggtgccg gcggaataga tctggaagtc cgattcggta
     1321 gcggcccggc caccctcgtt gctgacgtag gcggtcgtgc cgttgttgtc gatcaggacg
     1381 ctgtgcggtg cgttgccgac gcggatttgt tcaccctgct tcggtggctt cgcggtgagg
     1441 tcgatcctgg tgagcgtgtt gttctggttc agcagggcgt aagcgctctt gccatccttt
     1501 gcgaacgcga cgccgccggg ataagaagtg ctcggagtat agaacgtgcc gcagggtctc
     1561 gcgtagggac cgatggggct attcggaaag cagttgatga aggaattgtc cgggggcacg
     1621 ctgacctggg tgtcgtcttc cagcaagccc tcattattga cgttggcgat ggtaacgttg
     1681 ctgctgtcct ggctgaacat caggtgcttg ccatctgccg aataggctat gccgctatag
     1741 ctgccgctcg aatcgtgtcc aagcgtgatg tagttctgcc ggacaacgcc ggtgttggtg
     1801 tcgaacactt caacggcttc cgacgcgccc aaggtgagga cggcggcggt gtgagtgttg
     1861 agattggggt tcagcgcgat ggccttcgcg cggacccgga tgccgagatc gacctgtttg
     1921 ccggctggat tgatgacctg gccattgccg acgacccacg agccgttcgg ctgcgggccg
     1981 gttacgtagg tcgggtacgg cacggactga gcaccagcga gcaccggaag gctcagcccc
     2041 gcgagcaggc cggtcaacgg acgcaggcgg ttgatccgag acttattgcg agacctattt
     2101 cgaaacgtct ttcgggacgc ttttcgggac atataccgtt ctcctccttg gctttttttc
     2161 acccccacac atcgtggccg gcaaccttaa cagacgcaat gtgacggctt tatgacgatg
     2221 aggtgaaaat ttcgtaacat gggcggaagc ttttgtcggg gatcgacgag tctttccggg
     2281 aggtggtcta cttcagccta atcacgatcg ggcgataccg gcgtcgggtt tcgatcggtc
     2341 gtcgacgagc gcgcgcaaag gccccagcca aggttcgtag cgttgccagc gcgcgacgga
     2401 agtgcgatag atcggctgcc gtgtctgcca cttgctgggg gtcttcaccg cccgtgggtt
     2461 gcattcaggg cgcaggcacg cgtcgtgcca cgtcaggccg caggccgcga tgatccgccg
     2521 gatgactggt tcgggcgcgc gagtcaagtc ctcgtaatcg acctcaatga agcgatccgt
     2581 tggcagcacg ctccgccaat gctcgatgag ccgctgatag ctccggaaat aggcgaccag
     2641 ttcggcgcct ccggtcggaa aagccaggcc tggatggaaa tgagtttgat ggatcgagag
     2701 cgccgtgtcc actggagcgc ggcggcaatg gatgatgatc gcgcgcggga atgccacgtg
     2761 gatcagcccg gcccagagaa agttgaacgg catcttgtcg gtcactcgcg ccgccgtcgg
     2821 cgcgatcgcg cgcagcacgc ggagatagtc tgacaccgcc ttggagagga acggcatctc
     2881 gttcccggct ccgccggagc ggtgccacac cgccccgctc tcgttccaga aattcaactc
     2941 gtcgccggcc ctgacctcgg gatgcatgga gacgatctgc tcgacgagag ttgtgccgga
     3001 ccgcggcatg ccgatgatca gcaccggcgt cggatcgcag ctgccgagtt cgggagcccg
     3061 cgcgatccat tcgggtgtgc agcgggcaat catgcggtcg atctcgatgg agaacgcggt
     3121 cgagtcgaat gacgcagaac cccggcgcac agcgtctgcg gcgtcgaaat gatgcatggc
     3181 caacgggtag tcgccaagat cgtccgccgc ctttccgatg gcgaggtgaa ggcgcaggag
     3241 ttgcgccggt tccagtcccg gcgtggccaa ggcggcttcc atccgttgaa gcagtccgtg
     3301 gtcatcgctc gtgacaggcc gacaccggac cagatcgtag tagcttcccg ccaacagcgg
     3361 cgcgatcgcg atcgcgcgtt cgaagcatgc acgggcctcg tcgaaacgtc cgaagtcaga
     3421 gagcagattg cccagcagat cataggccat ggcgttctcc ggatcggcca ccaacgcctc
     3481 acgcaacacc cgttcggctt ccttattgcg atcctcgatc agcagcgccc gcgccttacc
     3541 caggcggccg tagctggtct taccggcggt cgctgccgcg cggcggaaac agccgatcgc
     3601 ctcttcgcga tggcccagtg tatagaccag ggcgccggcg cggaaccacg cttccgccag
     3661 ggatggaagc agcttggtgg cgcggtcata cgcaacgatt gccccacgga tgtcccccag
     3721 cttctccaat gcgattccca ggcggaaatg tgcatcggca tatcgcgggt tgctggcaac
     3781 ggcgcgctgc aatgccgcga tggcatccgg tacacggccg acctcgaggc atgcgaggcc
     3841 gagatcgtgg tggataatgg aattcgaggg ctgcagcagc gctgcatcgc gcaacggtgc
     3901 gatggcatcg gctggtcttc cggccctgag gaacatagtg gccaacgcaa gcagaggtga
     3961 cacctgctcc ggcgcggctg ggtttgaaga ctgggacata gcgcgaacct agcgtgaaag
     4021 ctttggcgtg gccatcgaag tggcgaacga acgcaaactg gccactgtcg ccgcatatta
     4081 aggcatactg gggatctgcg cggtgctggt gcgtctaggc tcaacctcga ttgtgtcgcc
     4141 cttatgcagc tttgcttctc cacctttttg aagcaccatc agagcggccc cggcagctag
     4201 gcccacctag cgagccttgg tcgctccgat agcaccgtcc actgcgtcat ccgctaactt
     4261 cgccgccgct agtgaggcgc ccaacttcag caggcgcatc ttgtttccgg cgcgaaatac
     4321 accttccggg tccttggtca ctggtaacac aggctcgtcg aataccaaag tcatcgaacc
     4381 ctccggaaaa atcgccgtgc aggatgtgtg accacgtgac cacggtaaat cctccccgct
     4441 gagtccatcg cggtaaacgt ggtaccggtg ggcaactttg aattaacgtc ctctccaagc
     4501 actaacctca atactgaatt tcgggagagc aatatctcat atccttgtta acggactatt
     4561 acaaccccat cggcgcggaa gatggccact gacacgaaca ccgaacggaa aacgaaccgg
     4621 cgcactgagg gttacgttag tctccggagg gcgt
//
LOCUS       DATILV010000533         3884 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3196350, whole genome shotgun sequence.
ACCESSION   DATILV010000533 DATILV010000000
VERSION     DATILV010000533.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3884
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3196350"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            355..657
                     /locus_tag="VLJ17_12220"
     CDS             355..657
                     /locus_tag="VLJ17_12220"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HSV23779.1"
                     /translation="MSNERRKNFRVEWQSPATIYDLEHDLVRPCILNNFSNTGANISG
                     VLASTIPDEFMLRITGDRHGTRKCRVLWRCNDTLGAEFTDCMTIEADVSQKARERV"
     gene            complement(661..1395)
                     /locus_tag="VLJ17_12225"
     CDS             complement(661..1395)
                     /locus_tag="VLJ17_12225"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV23780.1"
                     /translation="MADGISSHVAELAPTGRLRVAINFGNSVLAQHDPTGGPPRGVSA
                     ELARELARRMGVDIDYVPFDAAGKVFEALKAGLLDIVFLAIDPVRAAGIDFTAPYVVI
                     EGVYLVPKDSALHTVADVDRDGVRVAVAQGSAYDLYLTRALKRAKLVRQPSGPESLEM
                     FVRDRLEAAGGVRQPIVAFAQAHPDTRVIPERFMAIEQAMGTVKGREASVAYLRKFIE
                     ELKASGFVAQALKASGQADAAVAPPA"
     gene            complement(1555..2790)
                     /locus_tag="VLJ17_12230"
     CDS             complement(1555..2790)
                     /locus_tag="VLJ17_12230"
                     /inference="COORDINATES: protein motif:HMM:NF019040.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1501 domain-containing protein"
                     /protein_id="HSV23781.1"
                     /translation="MTSVFSRIGGMARRDFLRAGFGSLAFGAVGALRRAPAWAQTAAR
                     AAQKDRMLVVVELSGGNDGLNTVVPYGDDAYYRARPRIGIKPARLRKLDDHFGFQYTM
                     AGLERLYKDGHMAIVHGVGYEQPSFSHFSSMAYWQTAAPNRGDLYGWVGRMADAMDPE
                     GHANYVVNIDTQQSLAVRSQGHVPLVFDDPQKFVRTGFADEKDLLRTIAMRDHGTNEA
                     EEFMYGVSRSALNAEQLVRDAWAQYRTPIDYGLVRFGLDRVAALIAADFPTKIYYVAY
                     RNNAFDTHVYQSDVHARLWTYTSDHIAAFMKDVARLGRAQDVMLMVFSEFGRRVKENT
                     SQGTDHGTAAPVFLIGGPVAGGQYGNMPSLTELNDGNMVFTTDFRRVYATIIKGWMGH
                     AGAAGVLRGEFEPLPIIKA"
     gene            complement(2958..>3884)
                     /locus_tag="VLJ17_12235"
     CDS             complement(2958..>3884)
                     /locus_tag="VLJ17_12235"
                     /inference="COORDINATES: protein motif:HMM:NF020390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1800 family protein"
                     /protein_id="HSV23782.1"
                     /translation="DGVDILDIILEQKIAAEFMAAKIYKFFAREIISPDVRVQLGAVL
                     RDNNYEIAPLMRTIFLSRDFYSAPSVGTRIKGPVELIVSTYRKLGVRHLPGIPDLYVV
                     SRELGQTLLNPPTVAGWAQGRAWITPGLLLARGNFARDVLFPDIINFADPNFNPGAEV
                     KRVNDRILAGYSIGEATVDQDPGGGMEGGDKTMANVIAGSEDFNTRYGSLVGWQEAVR
                     RIKPIPRAAAQFDLSTLVMAAGAKTAEDAVDQLLLRLLSVPVNAAVRNTLVTFLKHQL
                     GTADLAQASTYMERPLRLTAHLIMSSPEFQLC"
BASE COUNT          773 a         1190 c         1183 g          738 t
ORIGIN      
        1 agcgagcgcg caccggacat cacgaacgcg gtgttttggc cgtccatgaa ggcacggtcc
       61 gcggcgctca gcacgataac tatgaaggca atccaaaacc agcgcatgga ggaattttgc
      121 gctggttgag tgcgccgtca acgacgaaac attgcaagcc acatgttacg cacatggact
      181 agccgtcacc cgtcgcccct gccccggcgg gtttttcaaa aaccccgcct ccgacgccgg
      241 aaccagtatg gttatcataa cggcgaaaat ttgcttgctg tttgatgttt tttgttacgg
      301 cggcgttcaa tgtcgaagtt gtaaagatcg tgaggccagt ctgcgggatg caagatgagt
      361 aacgaacggc gaaagaattt tcgggtcgaa tggcagtcac cggcgacgat ctacgacctc
      421 gaacacgatt tggttcgacc atgcattctc aacaattttt caaataccgg tgcgaatatc
      481 tccggcgtct tggccagcac cataccggat gagttcatgt tgcgcattac gggcgaccgc
      541 catggcaccc gcaaatgccg cgtattgtgg cgctgcaatg acacgctcgg ggcagaattc
      601 accgactgca tgaccatcga ggcggacgtg agccagaaag cacgggaacg tgtttagcga
      661 ttaagccggc ggcgcaacgg ctgcgtcggc ttggccgctg gccttgagcg cctgcgccac
      721 aaatcctgaa gccttcaact cttcaatgaa cttgcgcaga taggcgacgc tcgcttcgcg
      781 gcccttcacg gtgcccatgg cctgctcgat cgccatgaaa cgctcgggga tcacgcgggt
      841 gtcgggatgg gcctgcgcga aggcgacgat gggctggcgc acgccgccgg ctgcctcgag
      901 ccggtccctg acgaacatct ccaacgactc cggtccgctc ggctggcgca ccagcttggc
      961 gcgtttgagg gcgcgggtga gataaagatc ataggcgctg ccttgtgcga cggcgacccg
     1021 caccccgtcg cgatccacgt ccgcgaccgt gtgcagggct gaatccttgg gcaccaggta
     1081 aacgccttcg atcaccacat agggcgccgt gaagtcgatc ccagcggcgc gtaccggatc
     1141 gatggcgagg aacacaatgt ccaaaagccc cgctttgagc gcctcaaaca ccttaccggc
     1201 cgcatcgaag ggcacataat cgatgtcgac gcccatgcgg cgcgccaatt cgcgcgccaa
     1261 ttccgccgaa acgccgcgcg gcgggccgcc tgtgggatcg tgctgggcca gcaccgagtt
     1321 gccaaaattg atggccacgc gcagccggcc ggtgggtgcg agttccgcta cgtgagatga
     1381 gattccgtct gccatgtgga gggtgcccgg gggtgcattg ttcgataccc gggatacaat
     1441 gattttgcta gagcgtcgct tgaaaaacgc gtcaactgat aggtggctcc tagcccggtt
     1501 tgagcgccag cgaaaaccgg gctgtattgg ttttgaccaa taacctattc gccctcacgc
     1561 cttgatgatc ggcagcggct cgaactcgcc gcgcagaacg ccggcggcgc cggcgtgacc
     1621 catccagccc ttgatgatgg tggcgtagac gcggcggaaa tccgtggtga acaccatgtt
     1681 gccgtcgttg agctcggtca ggctcggcat gttgccatac tggccgcccg caaccggtcc
     1741 gccgatcaag aagactggcg ccgctgtgcc atgatcggtg ccttggctgg tgttttcctt
     1801 cacgcgccgg ccgaattcgc tgaataccat cagcatcacg tcctgcgccc ggccgagtcg
     1861 agctacgtcc ttcatgaacg ccgcgatgtg gtcggaggtg taggtccaca gccgcgcgtg
     1921 gacgtcgctc tgatagacat gggtatcgaa cgcattgttg cgatacgcga cgtagtagat
     1981 tttggtcggg aagtccgccg cgatcagcgc ggcgacccgg tcgaggccaa accgcaccaa
     2041 gccatagtca atcggcgtgc ggtactgcgc ccacgcgtcg cgcaccaatt gctcggcatt
     2101 gagggcgctg cgcgacacgc catacatgaa ttcctcggcc tcgttggtcc catggtctcg
     2161 catcgcaatg gtgcgcagca agtccttctc gtcggcaaac ccggtacgaa cgaatttctg
     2221 cggatcgtcg aacaccagcg gcacatggcc ctgcgaacgc accgcgagcg attgctgggt
     2281 gtcgatgttg accacataat tggcatgccc ttccgggtcc atggcgtccg ccatgcggcc
     2341 gacccagccg tagaggtcgc cgcgattggg tgctgccgtc tgccaatagg ccatggatga
     2401 aaagtgcgag aacgacggct gctcatagcc gacgccgtgc acgatggcca tatggccgtc
     2461 cttgtacagg cgctccaggc ccgccatggt gtattgaaag ccgaagtgat cgtcgagctt
     2521 gcgcaagcgc gccggcttga tgccgatccg tggcctggcg cggtaatagg cgtcgtctcc
     2581 gtagggcacg acggtgttga ggccgtcatt accgccggac aactcgacga cgacgagcat
     2641 acggtccttt tgtgccgcac gcgccgcggt ttgcgcccag gcgggagcgc gcctgagcgc
     2701 gccaacggcg ccgaacgcga ggctaccaaa gccagcgcgc aaaaaatcgc ggcgcgccat
     2761 gccgccgatg cgcgaaaaca cggatgtcat atcggcctcc cttaatcgct atggcgattg
     2821 tcgatctttg ggtgctcttt cccagtgaaa gcgggaaaga gcaccgccgg tatcgccggg
     2881 ttattggctc gcccgcggcc ttcgcccgga ccggctttgc gggcgcgccg ttgttattcc
     2941 atcagaacaa aatccctcta gcagagctga aactccggtg aactcatgat caaatgtgcc
     3001 gtcagacgca gcggccgctc catgtaggtt gaagcctgag ccagatcggc ggtgccgagc
     3061 tgatgtttaa ggaacgtcac caaagtgtta cgaacggccg cgttcaccgg cacgctgagc
     3121 aggcgaagca acagctggtc gaccgcatcc tctgcggtct tggcgccggc cgccatgacc
     3181 agggtggaga ggtcgaactg cgccgccgcc cgcgggatcg gcttgatccg acgcaccgct
     3241 tcctgccacc caaccaggct gccgtagcgg gtattgaaat cctcggagcc ggcgatgacg
     3301 ttcgccatgg tcttatcacc accttccata ccgccgccgg ggtcctgatc gacggtcgcc
     3361 tcgccaatgc tgtagcctgc cagaatgcgg tcgttgaccc gcttgacctc ggcgcccgga
     3421 ttgaagttcg gatcggcaaa attaatgatg tccggaaaca gaacatcacg ggcgaaattg
     3481 ccgcgcgcca gcagcaaccc cggcgtgatc caggcgcggc cttgggccca acccgcaacc
     3541 gtcggagggt tgagcaaggt ctgtccgagt tcgcggctga cgacgtagag atccgggatg
     3601 cccggcaggt gtctgacccc gagctttcgg taggtcgaca cgatcaactc gaccggcccc
     3661 tttattcgcg taccgaccga tggcgcgctg tagaaatctc gcgataggaa gatagttcgc
     3721 atcaacggcg cgatctcgta gttgttgtcg cgcagcaccg cgccgagttg cacccgaacg
     3781 tccggcgaaa taatttcgcg cgcaaaaaac ttgtagatct tggcggccat gaattcggcg
     3841 gcgatcttct gctccagaat gatatcgaga atatcaacgc catc
//
LOCUS       DATILV010000534         2992 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2684564, whole genome shotgun sequence.
ACCESSION   DATILV010000534 DATILV010000000
VERSION     DATILV010000534.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2992)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2992)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2992
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2684564"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..571
                     /locus_tag="VLJ17_12240"
     CDS             <1..571
                     /locus_tag="VLJ17_12240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_023004541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HSV23783.1"
                     /translation="MMERDATKRLTGRIEIDDAYLGGERNGGKRGRGSPGKTPIVAAV
                     ETTPEGKPIRLKLRRVKGFRRAEIATLARRNFHPASTVVSDGLHCFTGVGNAGCVHQP
                     IITGSGRKAALNPAFKWVNTTLGNIKSAITGTYRAIRDKHVPRYFAEFEYRFNRRYDL
                     AAMMPRLGYVAVRTPPMPYRLLKLAEDHA"
     gene            909..2660
                     /locus_tag="VLJ17_12245"
     CDS             909..2660
                     /locus_tag="VLJ17_12245"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HSV23784.1"
                     /translation="MVPMRDGARLNTFVFLPESGGPRFPVILHRTPYGIAAADARDKF
                     DHTNAWLPSAAEPMRGSILRGWRNIVARGYVAVYQDCRGRHGSEGEDRVYADDAADGY
                     DTLDWIAGQDWCNQRVGMSGSSAGATTTFAAASTRHPSLRAFFAQAGASSIYDDVIYE
                     GQGIEMERLWLWVAKNIPGLSKSHREAVLARFGIGAAELDSGGVAAAERYNRLDAARL
                     EKPPFINSPDWLLLPLTGYPDFATWQPFLDEIITHPGDDAFRARHNFRRTIDIPGFHV
                     TSWFDIFQTSVIAAFNDIQARTGTQKLWIGPNEHYFVYTSNFWVRDPYFEWFDHWLKG
                     QRSALIDEPAVFYSPRAWVDDRDGYVPDDWVHAERWPPPGTSPQRLYLCGDGSLAADC
                     RGGAARTYRYDPHHPIPSLGGRNMLIDAGPRDQRPAQSLPDYGLIYRGEPLDADLTIA
                     GAVRVTLHVESDCPDTDFVAKLIEVTPEGRAMLLMDGVMRAMYRDPSAGPQPMALGQV
                     CRVTIALGDIHHTFRAGSRIEIDVTSSNFPRRARNTNSGHPVLARDREADIRVATNTV
                     QHAPATPSVVELPVLGR"
     gene            2731..>2992
                     /locus_tag="VLJ17_12250"
     CDS             2731..>2992
                     /locus_tag="VLJ17_12250"
                     /inference="COORDINATES: protein motif:HMM:NF045432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23785.1"
                     /translation="MTRLRPLSGASNSRTERHRITSRSWRASSGWCRWTVLEIHPWGS
                     RIEKLETPDRVTIDLDPDEGLPWERVTEAAIDVREALLGIGLK"
BASE COUNT          559 a          996 c          905 g          532 t
ORIGIN      
        1 gatgatggag cgggacgcca caaagcgcct gacgggacgg atcgagatcg acgacgccta
       61 tctcggcggg gagcgcaacg gcggcaagcg gggccgcggt tcgcctggca agacgccgat
      121 cgtggcggcg gtcgaaacca caccagaggg caagccaatc cgcttgaagt tgcgccgcgt
      181 aaagggtttc cgccgtgccg aaatcgcgac cttggcgcgg cgcaatttcc atcctgccag
      241 caccgttgtc agtgacggcc tgcactgctt cactggggtc ggcaacgccg gctgcgtcca
      301 ccagccgatc atcactggat ccggtcgcaa ggccgccctg aaccctgcct tcaagtgggt
      361 caacaccacc ctcggcaaca tcaagagcgc catcactggc acttaccgcg ccatccgcga
      421 caagcatgta ccccgctact tcgccgaatt cgagtaccgc ttcaaccgcc gatacgatct
      481 cgccgccatg atgccacgcc tcggctatgt cgcagtccga accccgccga tgccataccg
      541 cctcctcaaa ttggctgagg atcatgcgta atcaggttta attttgatga agagaacaat
      601 aggttcgccg aaccagccgt cgcgctcact gcgaccggag ccgacatcga aaccggcagg
      661 gttacacctt aagacgcggc tccggctgtc gcacaaacgg ggtccacttc acatcggacc
      721 ccgccggtga tcttgcctat cgcatccttt atcctcgatg cgcccccgcg cgtgcgcgta
      781 cgcgcgctgc cggacgggaa gtgtgcggga atctcgatgt tgatcatggt gagctgcggt
      841 aagaagacga ccatcgggct aggaactgct gccggggaaa gcacatgggc gttcgttcat
      901 ttcagaccat ggtgccgatg cgcgacggcg ctaggctcaa cacgtttgtg ttcctgccgg
      961 aaagtggcgg cccgcgcttc ccggtgatcc tgcaccggac gccctatggg atcgcggcgg
     1021 cggatgctag ggacaaattc gaccatacca acgcctggct gccgagcgcc gccgaaccga
     1081 tgcgcggttc catcctgcgc ggctggagga acatcgtcgc gcgtggctac gtcgcggtct
     1141 atcaggattg ccgcggccgt cacgggtcgg aaggcgagga ccgggtttat gccgatgacg
     1201 cggccgacgg ctacgacacg ctcgactgga tcgccggcca agactggtgc aaccaacggg
     1261 tcggcatgtc cggctcttcc gccggcgcca ccacgacctt tgctgctgct tctacccggc
     1321 atccgagcct gcgtgccttc ttcgcccagg ccggcgcttc cagcatctat gacgatgtca
     1381 tttatgaggg ccagggcatc gaaatggagc ggctgtggtt atgggtcgcc aaaaatattc
     1441 ccggcctttc caaatcgcac cgcgaggcgg tgctggcgcg gttcggcatc ggcgccgccg
     1501 aacttgatag cgggggcgtt gcggcggcag agcgctataa ccgcctcgac gcggctcgcc
     1561 tggaaaaacc gccttttatc aactcgcccg attggctgct gctgccgctg accggctatc
     1621 cggactttgc gacctggcag ccgtttcttg acgagatcat cacccatccg ggcgacgacg
     1681 ccttccgcgc ccggcacaat ttccgccgca ccattgacat accgggcttt catgtcacca
     1741 gctggttcga catctttcag accagcgtga tcgccgcgtt caacgatatc caggcgcgga
     1801 ctggcacgca gaaattatgg atcggcccca acgagcacta cttcgtctac accagcaatt
     1861 tttgggtgcg cgatccttat ttcgaatggt tcgaccactg gctgaagggc cagcgcagcg
     1921 ccctcatcga cgaacctgcg gtgttctatt cgcctcgcgc ctgggtcgat gaccgcgatg
     1981 gctatgttcc tgatgattgg gttcatgccg aacgctggcc gccgccgggc acatcgccgc
     2041 agcggctcta tctgtgcggc gacggcagcc tcgcggccga ttgccgaggc ggtgcggccc
     2101 gcacctatcg ctacgatccg caccacccga tccccagtct cggcgggcgc aacatgctga
     2161 tcgacgccgg cccgcgcgac cagcgcccgg ctcagtcgct acccgattac ggcctgatct
     2221 atcgaggcga gccgcttgac gccgacctga ccatcgccgg cgcggtgcgc gttactctgc
     2281 atgtcgagtc cgactgccca gacaccgact ttgtcgccaa gctgatcgag gtcacgcctg
     2341 aagggcgtgc catgctgttg atggacgggg tgatgcgcgc gatgtaccgc gacccgtcgg
     2401 ccgggcctca gccgatggcg ctcggacagg tctgccgggt gaccatcgcc ctaggcgaca
     2461 ttcaccacac gttccgcgcc ggcagccgga tcgaaatcga tgtgaccagc agcaacttcc
     2521 cacgccgtgc ccgcaacacc aatagcggcc accccgtgct ggcgcgcgat cgcgaggccg
     2581 acatccgcgt cgccactaac acagtccagc acgcgccggc gaccccatcc gttgtcgaac
     2641 taccggtgct cggccgctag aaccaaacgc gagagtgcac gagaccgaca tgctaaaacc
     2701 gccgccgtcc ctattaccag aaacacattg gtgacgaggc tccggccgct atcaggcgct
     2761 tcgaactcaa ggacggagcg gcaccggatt acatcgagga gttggcgggc ctcatcgggt
     2821 tggtgcagat ggacagtgct tgagatccat ccctggggct cgaggattga aaagctggag
     2881 actcccgacc gggtgacaat cgacctcgac cccgacgaag gtttgccatg ggagcgcgtg
     2941 accgaggccg ccatcgatgt gcgcgaggcg ctgctcggga tcggcctcaa aa
//
LOCUS       DATILV010000535         2618 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2684731, whole genome shotgun sequence.
ACCESSION   DATILV010000535 DATILV010000000
VERSION     DATILV010000535.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2618
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2684731"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(224..385)
                     /locus_tag="VLJ17_12255"
     CDS             complement(224..385)
                     /locus_tag="VLJ17_12255"
                     /inference="COORDINATES: protein motif:HMM:NF022833.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2798 domain-containing protein"
                     /protein_id="HSV23786.1"
                     /translation="MRNRLGDRELSVSSGRFIVAQGMRSWALAWVIMLPVVLLAAPAI
                     RRLTDALTQ"
     gene            complement(514..1935)
                     /gene="pyk"
                     /locus_tag="VLJ17_12260"
     CDS             complement(514..1935)
                     /gene="pyk"
                     /locus_tag="VLJ17_12260"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HSV23787.1"
                     /translation="MRRHRRAKIVATVGPSSASPAMLEKLFLAGVDTFRLNFSHGTHD
                     DHAKVHAAIRALEMKMRRPIGILQDLQGPKIRVGTIKDGKIRVEAGETVRFVLSGSDG
                     DKNSIPLPHPEIFAAVAPGQDLLIDDGRVRVTITGLGSDHIDALVVNGGVVSNRKGVN
                     LPGTILGLSPLTAKDRADLAFGMKLGVDWVAMSFVQRAADLLEARSLVGDGTGLVAKI
                     EKPSAIEHIDDIVRLSDAVMVARGDLGVEIPPEDVPGRQKEIIRMCRLSVKPVIVATQ
                     MLDSMIGAPTPTRAEASDVATAVYDGADAVMLSAESASGSYPCEAVEMMDRIIRRTEQ
                     HKLYRSIIAASQPEIEHTPPHAVAAAAADLAEAIEAPAIVAFTSSGTTAARIARKRPS
                     VSILAITPDEATSRRLCLLWGAHSVFSDDVHTYEEMVDRASATVLSEEFAEPGDVVVV
                     VAGIPFAQAGTTNNLRVVQLARR"
BASE COUNT          549 a          792 c          746 g          531 t
ORIGIN      
        1 cgctccagcc cgcttagaca cgatcaacca tccgtgtgcc cagcaggtta tcgatcctgg
       61 atcgccactt cgcggacttc ttcaacacaa tctgccaaaa gcagtcatcg caagttcggc
      121 cagtcagcaa agttgagaga gcgcttcttg cagtgtttgt gctgcagcga agaacctata
      181 caacaaggta gactccccaa tttcggcctt tgtcgcgtct tgctcattgc gtcaaggcat
      241 ccgtgagcct tcgaatggcc ggcgccgcca aaagtacgac aggcagcatg atcacccaag
      301 caagcgccca tgaccgcatc ccttgagcga caatgaacct tcctgaagaa acggatagct
      361 cgcgatcgcc gaggcgattg cgcatgtcag acccgattga atcacgccga atacgaaatg
      421 gctaaagcga cgcgggactc ggcgcattga tcagtctgat ttctctagct acaacaaata
      481 aaacggcttg cagatgtgca agccgcttga ggactatcgt cgagcgagct gaactacccg
      541 caaattgttc gtcgtgcccg cctgcgcgaa cggaatccct gcaaccacca cgaccacgtc
      601 gcccggctct gcaaactctt ccgaaaggac cgtagcagaa gcgcgatcga ccatctcttc
      661 ataggtgtgc acatcgtcgg agaagacgct gtgagctccc cataggaggc agagccgccg
      721 ggaggtcgcc tcgtcgggag ttattgccaa gatagacacc gacggacgct tgcgcgcaat
      781 ccgggccgct gtcgttccac tcgaagtaaa cgcgacgatc gcaggcgcct cgatagcctc
      841 ggcgagatca gcagcggcag ccgcgacggc atgcggaggc gtgtgttcga tttccggctg
      901 tgaggcggcg atgatcgaac gatagagctt gtgctgttcg gtacgccgga tgatccggtc
      961 catcatctcc accgcctcgc acggatagct gcccgatgcg gactccgccg agagcatcac
     1021 cgcatctgcg ccgtcgtaga ctgcagtggc aacgtctgac gcctcggccc gcgtcggcgt
     1081 tggggcaccg atcatggagt ccagcatttg agtagcgacg atcaccggct tcaccgaaag
     1141 ccggcacatc cgtatgatct ctttctgtct gccgggaaca tcttcaggcg ggatttcgac
     1201 gccgagatcg ccccgagcca ccatcaccgc gtccgacagg cgcacgatgt cgtcgatatg
     1261 ttcgattgcc gacggcttct cgatcttcgc cacgagtccc gtgccatcgc cgacgagact
     1321 ccgcgcctcc aggagatctg ccgcccgttg aacgaatgac atcgcaaccc aatcgacgcc
     1381 gagtttcatc ccgaacgcaa gatctgcgcg gtccttcgcc gtcaacggcg acagtcccag
     1441 gatggtgccc gggagattga cgcctttacg gttggagacg actcccccgt tcacgaccag
     1501 cgcgtcgata tgatcgctgc ccaatcccgt gatcgtcacg cgaaccctgc cgtcgtcaat
     1561 taagagatcc tgcccgggag cgacagcggc aaatatctcg ggatgcggta gcggaatgga
     1621 attcttgtcg ccgtcgcttc ccgacagcac aaagcgaacg gtctcgccgg cctcgacccg
     1681 gatttttccg tccttgatcg tgccgacccg gatttttgga ccttggagat cctgcagaat
     1741 tccgatgggg cgccgcattt tcatttcgag cgcacgtatc gccgcgtgaa ccttggcgtg
     1801 atcgtcgtgg gtgccgtgac tgaaattgag ccgaaacgta tcgacgccag cgagaaacaa
     1861 cttctcgagc atcgccggcg aagcgctgga tggcccgacg gtggcaacga tcttggctcg
     1921 acggtgacgt cgcatgtgca aatcagcctc tcggccgcct caggtgatca ggaccgcgcg
     1981 aatatcgttg acgttcgtca tcgtcgggcc ggtatggacc aggtctccga tctcagtcat
     2041 tcagtacttg aactcctgca gctccgattg ggcttaaaca gctaggcctc tttcgggagg
     2101 tgaccgcctc gcgcaaaagc gcggccttct tggccgtaag ctgcgtcaga ttgcgcagat
     2161 gtcccgacgc gccgagcccg ttggtttgcc ggggcgcgct ttctttcgga agactcatga
     2221 agctccccat ggatgagcgg ggaccagaga tccgttgtca tgcttgggga ccggcggctc
     2281 tgtgaacggt gcgccttaac tggccgggtg tcgagaagaa tatcacgatc tacaagggct
     2341 gattcgcccc ggcgggctcg ctattcgatc ctgtgatccc catgtctgta ttcatacaga
     2401 tcaaccatcg agattggtcg gaatgcgcgg agacttccaa ctaaagggca agggtcggac
     2461 aatatctgtt tcgcggtatc gggcggccgc gcccaaattt gcgggcagaa tttgacacaa
     2521 tttcaatctg tgattcaatt acagtaaagc gggcatctcg ttagttcggt gcggcggcgt
     2581 gacaaacgtc agccatcgct agagcgacag gagcagtc
//
LOCUS       DATILV010000536         1607 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3705531, whole genome shotgun sequence.
ACCESSION   DATILV010000536 DATILV010000000
VERSION     DATILV010000536.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1607
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3705531"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..693
                     /locus_tag="VLJ17_12265"
     CDS             <1..693
                     /locus_tag="VLJ17_12265"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HSV23788.1"
                     /translation="YYGNISVAGAVGRLGLVPGSRVVDIGSGFGGPARYLAQNIGCLV
                     TAIELQSAVHAAAVQFTKRCRLSHRVMHVCADALDYPLPDATYDAVVSWLAILHIPDR
                     PRLLTRVARALRAGGGCYIEDCIRQTSVTKENLDDLASFLYGPSLYGIAEYETDLAAA
                     GFRDIQATDMTENWARFVATRLAAFESDRTRYVRVHGVPAYDTLRRFYAEIVRFYESG
                     TLGGIRIVARLP"
     gene            complement(1089..>1607)
                     /locus_tag="VLJ17_12270"
     CDS             complement(1089..>1607)
                     /locus_tag="VLJ17_12270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HSV23789.1"
                     /translation="VSFVKAVRYQTGRAGGFSDPLDEQKFLAATINELEKLPQWQNMA
                     IVIAWDDSDGDYDHQMSPIFNGSTSAVDALNGPGICGSGNPALGDAESRCGYGPRLPL
                     LIISPYAKPNFVDHSITDQTSILRFIEDNWSLGRIGGGSYDAIAGSLNNMFDFTGRHR
                     TPPLFLNPETGE"
BASE COUNT          308 a          454 c          480 g          365 t
ORIGIN      
        1 tattacggaa acatatcagt tgctggagcg gtcgggcggc ttgggctggt gcctggtagt
       61 cgcgtcgttg atatcggctc tggtttcggc ggcccggcgc gttacttggc gcagaatatt
      121 ggttgcctcg tgacggcgat cgagttgcag agcgcggtac atgcggctgc ggtccagttc
      181 acgaagcgct gcagactgag tcatcgcgtc atgcatgtct gtgccgatgc tcttgattat
      241 ccgctgccag atgcgaccta tgatgcggta gtgagttggc tcgccatcct gcatatccct
      301 gatcgaccgc gcctgctaac acgggtcgcg cgggccctgc gcgccggggg aggttgttac
      361 attgaagact gcattcggca aacatcagtc acgaaggaga atttggatga tctcgcatcg
      421 ttcctgtacg gaccctcgct gtacggtata gctgagtacg agacggatct ggccgctgcc
      481 ggctttcgcg acatccaggc gaccgacatg acggagaatt gggcgcggtt cgtcgccact
      541 cggctcgctg cgtttgaatc cgaccgcaca cgctatgtgc gagtgcatgg cgttccggct
      601 tatgacacac tccgcagatt ctacgcggag attgtccgct tctacgagtc agggactctc
      661 ggcggcattc gcatcgtagc ccgcctgcca tgacaagttc ggccaatgcc gctcgaaaaa
      721 tgccaatgag atccacagtt caggtctcag ccgagtcttg ccataattca gagttccgag
      781 tgcccggcca ctgctacttc ggcgtgctga caaagccgtc ggtgtttctc ggttcgagtc
      841 gatgtagaat gggacgattt ggccaaaatc attaagcccg ttgatcgtag tcgtgccgag
      901 gaacgatact ttccggtgct ggcgttttgg acgaatccgt gcatcgtcgt gccgatgtcg
      961 tccacgctca tcacctgaac ccgatcattg atcccgagcg ccatggcgga cataacgcca
     1021 gttgccgaaa agtccaacgt ggtcaggttg ctcgccggtc gagctttcgt ctgtaacgga
     1081 cgaaattatc attcgccggt ttccggattg aggaacagcg gtggcgtacg atgccgtccg
     1141 gtgaagtcga acatattgtt caacgagccg gcaatcgcgt cgtaggagcc gccaccgatc
     1201 cggccgagtg accagttatc ttcaatgaag cgcaggatcg aagtctggtc ggtgatgcta
     1261 tggtcaacga aattgggttt tgcgtatggc gagatgatca gcagcggcag ccgaggccca
     1321 tagccgcatc gcgattccgc atcgcccagg gcgggattgc ctgagccgca gattcccggc
     1381 ccgttcagcg cgtcaaccgc cgaggtcgag ccgttgaaga tcgggctcat ctgatgatcg
     1441 taatcgccgt cgctgtcgtc ccacgcaatt acgatcgcca tgttctgcca ctgtggcaac
     1501 ttctccagct cgttgatcgt cgcggccagg aatttctgct cgtcgagcgg atccgaaaaa
     1561 cctcccgcgc gtccggtctg gtagcggacg gctttaacaa agctcac
//
LOCUS       DATILV010000537         9168 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1407289, whole genome shotgun sequence.
ACCESSION   DATILV010000537 DATILV010000000
VERSION     DATILV010000537.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9168
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1407289"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            20..343
                     /locus_tag="VLJ17_12275"
     CDS             20..343
                     /locus_tag="VLJ17_12275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HSV23790.1"
                     /translation="MAMTEKTVTRADLCEAVYQKIGLSRTESAALVELVLKEITDCLE
                     RGETVKLSSFGSFVVRKKGQRIGRNPKTGTEVPISPRRVMVFKPSAILKQRINSGPDG
                     TSSSV"
     gene            370..1032
                     /locus_tag="VLJ17_12280"
     CDS             370..1032
                     /locus_tag="VLJ17_12280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HSV23791.1"
                     /translation="MNKAPDAFRTISEVADELDLPQHVLRFWESRFPHIRPMKRGGGR
                     RYYRPEDIDLLRGIRHLLYGDGYTIRGVQRILREQGVRTVQSVGQGKVANLPALPEAD
                     EHHASEPNGARSVLKFLTPVDSRAADEAADETEDESENLEPEAAVTPGFVPQNRPLAQ
                     VNSVAMPPKEPAAQARQVSLAVGVPAPRSMSAEDLSRLTHALTELEACRRLLDKANEG
                     GR"
     gene            1119..1412
                     /locus_tag="VLJ17_12285"
     CDS             1119..1412
                     /locus_tag="VLJ17_12285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015600032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23792.1"
                     /translation="MRHVVAITFVTLALMAPSAVSAGERVVDAALGAASGAIVAGPVG
                     LVAGGVIGFAAGPDIAHGLGLHHHHHYHHYYGHHLSAANRGGARAAEAGPDGR"
     gene            1517..3838
                     /locus_tag="VLJ17_12290"
     CDS             1517..3838
                     /locus_tag="VLJ17_12290"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HSV23793.1"
                     /translation="MQKFGIGQAVSRFEDPRLVRGGGRYVDDIALPGMAVGYVLRSPH
                     AHAKIHSIDLAAAKAAPGVLAVLTGADWQASGWGDLPVPGGLKRGDGSPMYRPRYPAL
                     VSDRVRWVGDYVAFVVAETHHQAADAAELISVEYEPVAAVVSTALAASDEAPRVFDDC
                     PNNICFVYLEGDKTATDAAFARAAHIVRQHFVINRVTAVTMEPRGSIGDFNANDGRYT
                     VYTTLQRAHPFRTELAGVLKVPEAKVRVVAGDIGGSFGMKSAVYNEVALVLLASRLTG
                     RPVKWVSTRAEAFLSDAQARDNVTDAELALDADGTFLALRVKTIANVGAYLQTAGSAF
                     IANLGSLAGVYRTPAIHADVTAVFTNTNPVRPYRGNGRPEAAYVIERLIDLAADTIGI
                     DPAELRQRNAIPPDAMPFRTGLTFTYDSGNFAKNLEMALQLADAAGFPLRRKEALTRG
                     KLRGLGISNTIERAGAPSYEGAEIRFDRSGTVTLFCGAINQGQGHETVFKQIMCDRLG
                     LDPADIQYLQGDTDQVFFGEGTGGSRTATLGGSAVDAATRKVIEKARAIAAFALKAEA
                     AQVKFADGVFSTPATNETLTVKEVARLAANPAKLPPGMEPGLVVTAVHRAEVENFPNG
                     AHVCEVEIDRETGEVEIIRYSVVDDVGTVLNPLLLHGQITGGIAQGAGQILREDIRFD
                     SVTGELLTGSFMDYAMPRASDLCAIAIKSNPVPTKTNPLGVKGAGEAGTVGAMPAIAN
                     ALVDALSEFGVRHIEMPATAEAIWRAMGGGEGV"
     gene            4133..4972
                     /locus_tag="VLJ17_12295"
     CDS             4133..4972
                     /locus_tag="VLJ17_12295"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HSV23794.1"
                     /translation="MVSFTISPLTDHIGAEVTGLDFTEPIDFETHTTLQRAFVKHHVL
                     VIREQHFGPDEFKSAAQLFGELHPHDKKERHVAGHPDIEYISNQDFVDGKRIIPGETF
                     HTDHSNHPRPPKATTLFAIQLPTSGGDTQYVNMHNAYDDLPEDTKQRIGGLRAVHVYQ
                     SKYSPRGLAGLSEESRRKLPPPGVHPLVRTHPENGRKALYLNPIRMESIVGMEDPDAL
                     ALIDELMQHATQQKYEYRHKWRDGDWVLWDNRSVMHQANPDYDMNERRLLYRLMLKGE
                     APV"
     gene            5061..5918
                     /locus_tag="VLJ17_12300"
     CDS             5061..5918
                     /locus_tag="VLJ17_12300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23795.1"
                     /translation="MASLAKTASGRLLTGSVLAGLLVALLSAALAQEGTKTNVPDFSS
                     NDTGWISIGTNWIAAPGSPPPVTDDPAHPYVPNNTGRQPTFRVANIDNPNLTQFAKDE
                     LKKSNDQVLRGKAMYARESRCWATGVPTYLLNPAQPTFFLQTPTKITMIWQMDQQVRH
                     VYLNVPHSENPKPSWYGESVGHYEGDTLVVDTIGQNTKTFIDNYRTPHSEQLHVVERY
                     RLVDDGKMLQADVTIEDPAALIKPLQVIHRWRRAQGPMRESRCAEGELFNPFQQDVEP
                     LPTADKQDF"
     gene            6195..7406
                     /locus_tag="VLJ17_12305"
     CDS             6195..7406
                     /locus_tag="VLJ17_12305"
                     /inference="COORDINATES: protein motif:HMM:NF014665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="COX15/CtaA family protein"
                     /protein_id="HSV23796.1"
                     /translation="MTIRWQLSDANNAPSGVHGATPVGARAIGLWLWCVAGLVFAMVL
                     VGGATRLTESGLSIVEWKPVMGAVPPLGAADWQAEFEKYQTIPQYDRLNRGMSLDEFK
                     TIYWWEWGHRLLGRLIGAAFLLPFLWFLWRRSIDRRLGLALAGIFALGAVQSAVGWWM
                     VASGLTERVSVSQYRLAFHLTLACVIYVALVWAADRTFAFASGGPGGDGRQAPQGSTP
                     TQKGHQEGHQEGPPLPSPQGGGEKKCARRLRWSAGALLGLVVVQIYLGALVAGLRAGL
                     IYNTWPLIDGSLIPSAANLFFDQPLWRNFFENTLTVQFDHRMMAYGLCVFGLAHAVDA
                     YCHGRGEPLATGAGFVAVALLAQAGIGIMTLIRGVPIEIALMHQAVALVVLTGTTLHA
                     ARTLSNSRRPS"
     gene            7403..7780
                     /locus_tag="VLJ17_12310"
     CDS             7403..7780
                     /locus_tag="VLJ17_12310"
                     /inference="COORDINATES: protein motif:HMM:NF039485.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YidB family protein"
                     /protein_id="HSV23797.1"
                     /translation="MSDIFGSILGSALRGFAGQGGGGAISDILSQVLGKTDLGGVGGL
                     LQQLQQSGLGPQVASWLGNGQNLPVSTDQLKSALGDQHLRQLATQLGLPVDQLLGELS
                     QHLPGAIDHMSPNGTLEEQLGPG"
     gene            complement(7823..9106)
                     /locus_tag="VLJ17_12315"
     CDS             complement(7823..9106)
                     /locus_tag="VLJ17_12315"
                     /EC_number="2.5.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008137953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetylhomoserine
                     aminocarboxypropyltransferase"
                     /protein_id="HSV23798.1"
                     /translation="MTERTPGFATLAVHAGSQPDPTTGARATPIYQTTSFVFDDVDHA
                     ASLFGLQTFGNIYTRIGNPTNAVLEERVAALEGGTAGLAVASGHAAQVLVMHALMTSG
                     DELVASKKLYGGSINQFNHAFRNFGWTVVWADPDDAGSFERAISSKTKAIFIESIANP
                     GGIITDVEAIGDVARRAGVPLVVDNTLATPYLCKPIEHGADIVVHSLTKFLGGHGNSI
                     GGLIVDAGTFDWSRAGRYPMLSEPRPEYQGIVLHETFGNFAFAIACRVLGLRDLGPAL
                     SPFNAFLILTGIETLPLRMQRHCDNATAVAAWLANYGEVAWVSYPGLPGDRYHHLAKK
                     YVPKGAGAVLTFGLKGGYDAGVKLVSNVKLFSHLANIGDTRSLIIHPASTTHRQLSDA
                     QKVQAGAGPDVVRLSVGIEDLEDIIADLEQALSAA"
BASE COUNT         1754 a         2754 c         2947 g         1713 t
ORIGIN      
        1 atcgattggt gcatcgaggc tggcgatgac cgaaaagacc gttacgcgag cggatctgtg
       61 cgaggccgtc tatcaaaaga tcggcttatc tcgaaccgaa tcggcagcgc tcgtcgagtt
      121 ggtgctcaag gaaatcacgg attgcctcga acgcggcgaa acggtgaagc tttcttcgtt
      181 cggttccttc gtggtgcgca agaaggggca gcgcatcggg cgcaatccca agaccggaac
      241 ggaagtgcca atctcgccgc gacgggttat ggtgttcaag ccgtcggcga ttctcaagca
      301 gcgcatcaac tcgggtccgg acggcaccag tagcagcgtg tagcgcagga cccaaaatta
      361 gaggcgactt tgaacaaggc gcccgacgca tttcgtacga tcagcgaggt cgcagacgaa
      421 ctcgatctgc cgcagcacgt gctgcggttc tgggagagtc gttttcctca catcaggccg
      481 atgaagcgcg gcggcggccg gcgctattat cgtcctgagg acattgatct tttacgcggc
      541 atccggcatt tgctctatgg tgacggctac acgatccggg gggtgcagcg catcctgcgc
      601 gaacagggcg tccggacggt gcaatcggta ggtcagggga aggtagcgaa cctgccagca
      661 ttgccggagg cggatgaaca tcatgctagc gagcctaatg gcgcgcggag cgttctcaag
      721 ttcctgacac ctgtggactc tagggcggcc gacgaagcgg ccgatgaaac ggaggatgag
      781 agcgagaacc tggaaccaga agcagccgtg acaccaggtt tcgtacccca aaaccgcccc
      841 ttggctcagg ttaattccgt cgccatgccg ccgaaagagc cggcggcgca agctcgtcaa
      901 gtttcgctcg ctgtcggcgt gcctgcgccg aggagcatgt cggccgagga cctaagtcgg
      961 ctcacgcatg cgcttacgga gcttgaggcg tgccggcggt tgcttgataa ggcgaatgaa
     1021 ggggggcggt gaaccatttg gcaacccaaa gggtttagac cgatgtcctg ggacggaccc
     1081 cgcagtggct tggtctgtca acttcacgtg gggaaattat gagacacgtt gttgcaataa
     1141 cattcgtgac tttggcgctg atggcgccgt ctgctgtcag cgccggagaa cgtgtcgtcg
     1201 acgctgcgct cggtgcagct tcgggcgcca tcgtggccgg ccctgtgggc cttgttgctg
     1261 gcggcgtgat cgggtttgcc gccggtccgg acattgccca cggattgggg ctccatcatc
     1321 accatcacta tcaccactat tacggtcacc acttgagcgc ggctaatcgc ggcggtgcga
     1381 gggctgctga ggcaggtcct gacggccgct gagtggtaga cggctgcggc acgatagctc
     1441 gttggactcg atatcggcct gtctttaaca tcccgtttcc cctcgggtgc gaatgagggt
     1501 ggtgacgggg cttgtggtgc agaagttcgg aatcggtcag gcggtgtccc gctttgagga
     1561 cccgcggttg gtgcgtggcg gcggacgcta tgtggatgac attgcgttgc caggcatggc
     1621 ggtcggctat gtgctgcgct ctccccacgc gcacgcaaaa atccattcga tcgacctcgc
     1681 cgccgccaag gccgcaccag gagtgctcgc ggtattgacc ggcgccgact ggcaggcgtc
     1741 cggatggggt gacctgccgg tgccgggcgg cctcaagcga ggtgacggca gcccgatgta
     1801 ccggccgcgc tatccggcac tcgtatcgga tcgggtgcgc tgggtcggcg attacgtggc
     1861 cttcgtggtg gcggaaaccc accatcaggc agccgatgcg gccgaactca tttcggtcga
     1921 atatgagccc gttgccgcgg tagtctcgac cgcccttgcc gcctccgacg aggcgccccg
     1981 ggtgttcgac gattgcccga acaatatctg ctttgtctat cttgaaggcg acaagacggc
     2041 gaccgatgcg gccttcgcgc gcgcggccca tatcgtgcgt cagcacttcg tcatcaatcg
     2101 cgtcaccgcg gtgacgatgg aaccgcgcgg tagcatcggc gatttcaatg ccaatgacgg
     2161 ccgctacacc gtctatacca ctttgcagcg cgcccatccg tttcgtaccg agttggccgg
     2221 cgtgctcaag gtaccggagg ctaaggttcg cgtcgttgcc ggcgacatag gcggcagctt
     2281 tggcatgaag tccgcggttt acaacgaagt ggcgctggtg ttgctggcat cgcggctcac
     2341 cgggcggccg gtgaaatggg tgagcacgcg ggcggaagca tttctttccg acgcccaggc
     2401 gcgtgacaac gtcaccgacg ccgagcttgc gctcgacgcg gatggcacct ttttggcgct
     2461 gcgagtgaag accatcgcca atgtgggcgc ttatttgcag accgcggggt ctgccttcat
     2521 cgccaatctc ggctcgctgg ccggcgtcta tcgtacgccc gcgatccatg ccgacgtgac
     2581 cgcagttttc accaacacca atccagttcg gccctatcgc ggcaacggcc gccccgaggc
     2641 ggcttatgtg atcgagcgct tgatcgacct cgccgctgac acgatcggca tcgatccggc
     2701 cgagctgcgc cagcgcaacg ccatcccgcc agatgcgatg ccgtttcgga cagggctcac
     2761 tttcacctat gacagcggga attttgccaa aaatctggaa atggctctgc aactcgccga
     2821 cgccgccggc tttccgttac gccgcaagga ggcgctcacg agggggaagc tgcgcgggct
     2881 cggcatatcc aacacgatcg agcgcgccgg cgcgccgagc tatgagggcg cggaaatcag
     2941 gttcgatcgc tctggcaccg tgacgctgtt ctgcggcgcc atcaaccagg gtcagggtca
     3001 tgagaccgtg ttcaagcaga tcatgtgcga ccgcctcggc cttgatccgg ccgatatcca
     3061 atatctccaa ggggatactg atcaggtgtt cttcggcgaa ggaaccggcg gttcgcgcac
     3121 cgcaacactt ggcggctcgg cggtcgatgc cgccacccgc aaggtgatcg agaaggcgcg
     3181 cgccatagcg gccttcgccc tcaaggcgga ggccgcccag gtgaaattcg ccgacggcgt
     3241 attctcgacg ccggcaacca atgagacgct gaccgtgaag gaggtcgcaa gactcgccgc
     3301 aaatccggcc aagctgccac ccggcatgga gccggggctg gttgtcaccg cagtccatcg
     3361 cgccgaggtc gagaattttc ccaacggtgc ccatgtgtgc gaagtggaga tcgatcgcga
     3421 aaccggcgaa gtcgagatca tacgctacag cgtcgtggac gacgtcggca ccgtgctcaa
     3481 tccgctgctc cttcatggcc agatcaccgg cggcatcgcc cagggtgctg gccagatcct
     3541 gcgtgaggac atcaggttcg attccgttac cggtgagctt ctgaccggat cgtttatgga
     3601 ctatgcgatg ccgcgcgcga gcgatctgtg cgcgatcgcg atcaagagca acccggtgcc
     3661 gaccaagacc aatccgctgg gcgtcaaagg cgcgggcgaa gccggaaccg tcggcgccat
     3721 gcccgccatc gccaatgcgc tggtcgatgc gctgtcggaa ttcggcgtcc gccacatcga
     3781 aatgcctgcc accgcggagg ccatttggcg tgccatgggg ggaggggagg gggtgtgaga
     3841 cccaaaggtg gaagcggcgc cgtttgtagg gcgcgcgcta tgctctgggt ttttctcaag
     3901 acaagtatta gttcaaccga acgagatcct cgaaattatc aggtcgcctt ttgcctcgcc
     3961 gtcaaattga cgccagcgct tcggtcccgt acgtttgcag ttgtgcgcag gctgggcaaa
     4021 ggattggtcg cgaagggcgt ggcgatcggg cctgccgcgg cggcaggcgg gcctcggccc
     4081 gacgaaggga gcacatcaag caagggtgcc tcaaggtcga gaggatcagc ccatggtctc
     4141 ttttaccatc tcgcctctga ctgatcacat cggcgctgaa gtcacggggc tcgatttcac
     4201 cgaaccgatc gacttcgaaa cgcacaccac ccttcagcgt gcctttgtca aacatcacgt
     4261 cctggtcata cgagagcagc acttcggacc ggatgagttc aaatccgctg ctcagttatt
     4321 cggcgagctt catccgcacg acaagaaaga acgccacgtc gccggccatc cggacatcga
     4381 gtacatctcc aaccaggact tcgtggacgg caagcgaatt atcccgggtg aaacattcca
     4441 taccgaccat tccaaccacc cgcgtccacc caaagccacg acgctgttcg ctatccaatt
     4501 gcccaccagc ggcggcgaca cccaatacgt aaacatgcat aatgcctatg atgacctgcc
     4561 cgaggacacc aaacaaagaa tcggcgggct cagggctgtg catgtgtacc agagcaagta
     4621 cagcccgcgc gggctcgccg ggttgagcga ggaaagccgc cgcaagctgc cgccgcccgg
     4681 cgtgcatccg ctggtacgca cgcatccgga gaacggccgc aaggccttgt acctgaatcc
     4741 tattcgcatg gaatccattg ttgggatgga agacccggat gcgttggcgc tgatcgacga
     4801 actgatgcag cacgccacgc agcagaagta cgagtaccgg cacaagtggc gcgacggcga
     4861 ctgggtgctg tgggacaacc gcagcgtcat gcatcaggcc aatccggact acgacatgaa
     4921 cgagcgccgc ctgctctacc gcttgatgct caagggcgaa gcgccggtgt gaggtcaagg
     4981 ggccaggatg agttggatga agcctcgatg tgaggtattt tccgaccaaa cgaccaatac
     5041 cctgagaggg gaggaaaccc gtggcgagcc tcgcgaagac cgcatcagga cgtttgctca
     5101 ccggcagcgt gttggccggc cttctggtag cgttgctctc agccgcgctc gcgcaggagg
     5161 ggacaaaaac caacgtgccc gatttctcct cgaacgatac cgggtggatc tcgatcggca
     5221 ccaactggat cgcggcaccg ggcagcccgc cgccggtcac cgacgacccc gcacatccct
     5281 acgtgcccaa caataccggc aggcagccga cgtttcgggt tgccaatatc gacaatccga
     5341 atctgacgca atttgccaag gacgaattga agaaatcgaa tgaccaggtg ctccgcggca
     5401 aagcgatgta tgcgcgcgaa tcgcgctgct gggcgacggg cgttccgacg tatcttctaa
     5461 acccggcgca gcccacgttc tttctgcaga cccccaccaa gattacgatg atttggcaga
     5521 tggatcagca agtgcgccac gtctacctca acgtgccgca ttcggagaat ccgaagccgt
     5581 cctggtatgg cgagtcggtt ggccattacg agggcgatac gcttgtggtc gacaccatcg
     5641 gccagaacac caagaccttc atcgacaatt atcgcacgcc gcacagcgaa caactgcacg
     5701 tggtcgagcg ctatcgcctg gtcgacgacg gcaaaatgct ccaggccgac gtcaccatcg
     5761 aggacccggc cgccttgatc aagccgctgc aggtgatcca ccgctggcgg cgcgcgcaag
     5821 gcccgatgcg cgaatcgcgc tgcgccgagg gggaactttt caaccctttc cagcaggacg
     5881 tcgagccgct gccgaccgcg gataagcagg atttctaaag ccgcttccgg cagtgccagc
     5941 atacgtcgct tggcggttgc gccccgtgcg agaaccgggg aggcctcgca gagcgtggag
     6001 gcgcccgaca aggcggtcgc cggccgaaca tatgccgcag caggaggagc tatcttgtgg
     6061 ccggtagaaa ggcagcgcat accgttgaga ttgaggatgc cgcagcgccg ctcagtcatc
     6121 tctcccccca aggggagagg tgaagagccg ctgcctcaag ctcatcaaga tgtgctccca
     6181 ggggtatcgg ttccatgaca atccgatggc agctgtccga tgctaataac gcgccatccg
     6241 gagtgcatgg agcaacgccg gtgggcgccc gcgccatcgg gttatggctg tggtgcgtag
     6301 caggcctggt gttcgcgatg gtcctggtag gcggggcgac gcggctcacc gagtccggtc
     6361 tctcgatcgt tgaatggaag cccgtgatgg gcgccgttcc gccgctcgga gcagcggact
     6421 ggcaagccga attcgaaaaa taccagacca ttccgcaata tgaccggctc aatcgcggca
     6481 tgagccttga cgaatttaag accatctatt ggtgggagtg gggtcatcgg ctgcttggcc
     6541 ggctcatcgg cgcggctttc ctgctgccgt ttctgtggtt cctgtggcgc agatcgatcg
     6601 accgccggct cgggctcgcc ctcgccggca tctttgcgct cggagccgtg cagagcgcgg
     6661 tcggctggtg gatggtggca tcggggctta cggagcgggt cagcgtgtcg caataccggc
     6721 tcgcattcca cctcacgctt gcctgtgtaa tctatgtggc gctggtgtgg gcggctgatc
     6781 gcacatttgc gtttgcctct ggggggccgg gaggtgatgg caggcaagcg ccccaaggct
     6841 cgacccccac ccaaaagggg caccaagagg ggcaccaaga ggggcccccc ttgccctccc
     6901 cacaaggggg aggggagaag aaatgcgcgc gacgcctgcg atggagcgcc ggcgcgctgt
     6961 tgggattggt ggttgtgcaa atttatctcg gtgctctggt agccggcttg cgcgccggat
     7021 tgatctacaa cacctggccc ttgatcgacg gcagcttgat tccgtctgcc gcaaacctgt
     7081 tcttcgatca gccgctgtgg cggaattttt tcgagaacac actgaccgtg cagttcgacc
     7141 accgcatgat ggcgtatgga ctatgcgtgt ttgggcttgc gcatgcggtc gatgcctatt
     7201 gccacggacg cggcgaaccg cttgccactg gcgccggttt cgtggcagtc gcgctcctcg
     7261 cgcaggccgg tatcggaatc atgacgctca tccgtggggt gccgatcgag attgcgctca
     7321 tgcatcaagc cgtggcactc gtcgtgctca cgggcacaac gctccatgcc gcccgcacct
     7381 tatcaaattc aaggaggcct tcgtgagtga catcttcggc agcattttgg gaagcgcatt
     7441 aaggggattt gccgggcagg gcgggggcgg ggcgatctcc gacattctgt cgcaagtgct
     7501 cggcaagacc gatctcggtg gcgtcggcgg attgctgcag cagctgcaac aatcgggcct
     7561 cggaccgcag gtcgcatcat ggcttggtaa cggacaaaac ctgccggtct cgaccgatca
     7621 gctcaagagc gcgctgggcg accaacatct gcggcaactc gcgacccagc tcggcctgcc
     7681 ggtcgaccag ttgctcggag aattgtccca gcatctgcca ggagccattg atcacatgag
     7741 tccgaacggg actttggagg agcaactcgg tcccgggtga tggagggatg ggtttggcaa
     7801 gcgcccggcc catcccacaa attcacgccg ctgagagcgc ttgctccaga tcggcgatga
     7861 tatcctccag gtcctcgatg ccgactgaca gccgcaccac gtcgggaccg gcgccggcct
     7921 gcaccttctg ggcatcggat agttgccgat gcgtggtcga cgccggatgg atgatgaggg
     7981 aacgggtgtc gccgatattg gcgaggtgcg aaaacagctt gacgttcgac accaatttga
     8041 cgccggcgtc atagccgccc ttgagcccga acgtgagcac ggcgccggcg cccttgggca
     8101 cgtatttctt tgcgaggtgg tgatagcggt cgcctggcag gccggggtag ctgacccagg
     8161 ccacctcgcc atagttcgcg agccatgccg cgaccgcagt ggcgttgtca caatggcgct
     8221 gcatccgcag cggcaaggtt tcgatgccgg tgaggatcaa gaaagcgttg aacggcgaca
     8281 gggctggacc gagatcgcgc aagcccagca cccggcatgc gatcgcgaat gcgaagttgc
     8341 cgaaggtttc atgcagcacg atgccttgat actcgggtct cggctcggac agcatcgggt
     8401 agcggcccgc ccgcgaccag tcgaaggtgc cggcatcgac gatcaaaccg ccgattgaat
     8461 tgccgtgacc gccgagaaac ttggtgagcg aatgcaccac gatgtcagcg ccgtgctcga
     8521 tcggcttgca cagatatggc gtcgccagtg tgttgtcgac gacgagcggc acgccggcac
     8581 ggcgtgcgac atccccgatc gcttcgacgt cggtgataat gccgccgggg tttgcgatcg
     8641 attcgatgaa gatcgccttg gtttttgagg aaatcgcgcg ctcgaagctc ccggcatcgt
     8701 ccgggtccgc ccataccacg gtccagccga aattccggaa tgcgtggttg aactggttga
     8761 tggaaccgcc gtagagcttc tttgaagcca ccagctcgtc gccggaggtc atcagggcgt
     8821 gcatcaccag cacttgtgcg gcgtggcctg atgccaccgc gagcccggca gtgcctcctt
     8881 cgagggcggc gacgcgctcc tcaagcaccg cgttggtggg gttgccgatg cgggtataga
     8941 tgttgccgaa cgtctgcagg ccgaacagtg acgcagcgtg gtcgacgtcg tcgaatacga
     9001 aggacgtggt ctgatagatc ggggttgcgc gcgcccctgt ggtcggatcg ggctggctac
     9061 ccgcatgaac cgcgagagta gcgaatccgg gcgtgcgttc ggtcatggcg gttccttgcg
     9121 ttttccgggc ccaagttgtg cggaggttta tcggagccgg tcagtccg
//
LOCUS       DATILV010000538         2114 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_898279, whole genome shotgun sequence.
ACCESSION   DATILV010000538 DATILV010000000
VERSION     DATILV010000538.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2114)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2114)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2114
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_898279"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            456..1967
                     /locus_tag="VLJ17_12320"
     CDS             456..1967
                     /locus_tag="VLJ17_12320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018245527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1254 domain-containing protein"
                     /protein_id="HSV23799.1"
                     /translation="MSKELRDANQCHYRVGKIDRRSLIPLLGAGAAFLMLAGKAQAQQ
                     VPIPTTAAQVPGPPSGTAMTTAYVQSVGRAAYLWGWALVNNANRHADFSKAPEPGLIG
                     GVVPVAHNAVAMLTGYISPDQRIIACANQDVAYGAGFLDDLDNAPIVFQVPDFGDRFW
                     VYALYDARTDQLSNIGKQYGTKPGFYMVVGPNWKGETPKGITAVLRSSTTVVFVIPRV
                     FMDDTPEDHTAIQPLLSQIVFYPLSRFDGQMKTVDWSKLPHYPAPKSSGPGETQWVNP
                     ETFFDELPAVMKSVPPLPGEEALYASIGSVLDAAAKDAAVKKTLTETAVAADREMITP
                     FLQWRYNGRSAGNGWNSPVNNAAWGTDYLNRTATAKSNMFDNLPTETKYIYTDDDSSG
                     KQLNGQNTYVVTFAKVPPVKGFWSLTLYNDVHFFNPNPLKRYSLGTKNKTLKYNADGS
                     LTLYAGAKSPGTDKESNWLPAPEGTFSLYIRAYWPDKAIIDATWQPPTIAMVT"
BASE COUNT          460 a          653 c          611 g          390 t
ORIGIN      
        1 ggcccaaaat gggcgagcaa gagagacgaa caagtttctg acgagttgtg tctcgcccta
       61 agtctcgtcg agagcagcga aggtctgcgt tgggtcattc gcgtcgcacc ggccggtgct
      121 ggtcgtcagt tgacttccgc agttccccaa aacctgacgc tggtttgagt gcttggagtg
      181 cgcagcgaag tgccacaagc ggtcgtcaat gtcacaatcg atcttgatgc gccgtgtacc
      241 aacattgctt tgccttcggc cgaatttgca taggcgaccc cgcgcataag ggtacagtga
      301 gtgcgcttgg aatggagcaa ttgtggccat tcacacgtca ggcatggctc atgccgctac
      361 cgaccgcaaa gcgcacggtg ccaaatgtaa ggtttctctg atctgcactt ctatcgccat
      421 ccattcgtgt attcacggaa gttaggagcc taagcatgtc caaggagctt cgcgacgcca
      481 accaatgtca ctaccgggtt ggaaagattg atcgtcgatc cttgatccct ttactcggcg
      541 caggggcggc cttcctgatg ctggccggta aggctcaggc gcagcaggtc ccgatcccca
      601 caaccgccgc ccaagttccc ggcccgccga gcggcaccgc catgaccacg gcctacgtcc
      661 agtcggttgg acgtgcggcc tatctgtggg gctgggcgct ggtgaataac gccaaccgcc
      721 acgcggattt ttcgaaggcg cccgaacccg gcctgatcgg cggggtggtg ccggtcgcgc
      781 acaacgcggt cgcgatgctg accggttata tcagcccgga ccagcgcatc atcgcctgcg
      841 cgaaccagga tgtcgcgtac ggggccggct tcctcgacga cctggataac gcgcccatcg
      901 tgttccaggt gccggacttc ggcgaccgct tctgggttta tgcactctat gatgcacgta
      961 cagaccaact ctcgaacatc ggcaagcaat acggcacgaa gcccggcttc tacatggtgg
     1021 tcggcccgaa ttggaagggt gagacgccga agggaattac ggcggtgttg cgatcttcca
     1081 cgacggtggt gttcgtcatc ccacgcgtat tcatggacga cacgccggag gatcacaccg
     1141 ccatccaacc gctgctcagc cagatcgtct tctacccact ctcgcgcttc gacgggcaaa
     1201 tgaagaccgt ggattggagc aagctccccc attaccccgc gcccaagtcc agtggcccag
     1261 gcgagacgca gtgggttaac cccgagactt ttttcgatga gctgccggcg gtgatgaaaa
     1321 gcgtgccccc gctaccgggc gaggaagctc tctatgcgtc gatcggcagt gtgctcgatg
     1381 cggcggccaa ggacgcggcg gtcaagaaga cgctgacgga aaccgccgtc gccgccgacc
     1441 gagagatgat cacaccgttc ttgcagtggc gctataacgg acgctccgcc gggaatggct
     1501 ggaattcacc ggtcaataat gcggcgtggg gaacggacta tctcaatcgc accgccacgg
     1561 cgaaatcgaa catgttcgac aacctgccga cggaaaccaa gtacatctac acggacgatg
     1621 acagttcggg aaaacagctc aacggtcaga acacctatgt ggtcaccttt gccaaggtcc
     1681 cgccggtcaa ggggttctgg tcgctcacgt tgtacaacga tgtccatttc ttcaatccga
     1741 atccgctgaa acgctactcg ctcggcacca agaacaagac cctcaaatac aacgcggacg
     1801 gatcgctgac gctctatgcc ggcgccaagt ctcccggcac ggacaaggag agcaactggc
     1861 tgccggcgcc tgaaggaacg ttctcgctct acatccgcgc ctactggccc gacaaggcca
     1921 tcatcgacgc cacatggcag ccgccgacca tcgcgatggt gacgtgagca aaccgatcaa
     1981 gatcagagag ggtgcgaaca tgaaaaccaa ccaggagacc tccttcgata aactggccaa
     2041 cctcccgttc gcggaaggtc ggcccacgaa ggagaccgcg cagacactcc gcgacgaact
     2101 gctcttccaa cggg
//
LOCUS       DATILV010000539        16427 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3197853, whole genome shotgun sequence.
ACCESSION   DATILV010000539 DATILV010000000
VERSION     DATILV010000539.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 16427)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16427)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16427
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3197853"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..610
                     /locus_tag="VLJ17_12325"
     CDS             <1..610
                     /locus_tag="VLJ17_12325"
                     /inference="COORDINATES: protein motif:HMM:NF028479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="6-bladed beta-propeller"
                     /protein_id="HSV23800.1"
                     /translation="DGVELMRLGKAGVSGSGPDLFDQPNDIVVAPSGDIFVTDSHRRG
                     KNNRVVKFDKIGKFIKEWGHKGSGPGELSEPHAIAMDSQGRLFVGDRENNRIQIFDQD
                     GKVLDEWHQFGRPSGIYITRDDTIYVADSESGPNTGANELMGIRKGIRIGSARDGKVF
                     AFIEDMESTTPDHSGAEGLGVDAQGNVYGAVVRRQMLERHVK"
     gene            620..838
                     /locus_tag="VLJ17_12330"
     CDS             620..838
                     /locus_tag="VLJ17_12330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23801.1"
                     /translation="MYKLIGIILAAMPVILFLRAMFMGSRKRSQAVSNFKKQVDYLVW
                     AILFMIGCGLVFSIGKLIYDMRAIAPHS"
     gene            complement(1081..2145)
                     /locus_tag="VLJ17_12335"
     CDS             complement(1081..2145)
                     /locus_tag="VLJ17_12335"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HSV23802.1"
                     /translation="MTRRGVVIAAFGLAVGVLTVAPAGAWDRGDVDVLAVLPDVTPGQ
                     PSSVEGLTVGPDGNIYVPSFGFNTKGALSGNAALFVIRPNGKLLRQVTIANSSPHMLG
                     LGFNPANGNLLIIDFGAGKVLRVDPTTGASSEFMTPTLAGAGLNALTFDKFGNVYVSD
                     SFNGIIWKTGPGGGTPTIWSSSPLLGPGTGLTPPFGANGVEFNNAGTIMYVANTAFHQ
                     IIQIPVNPGGTAGTPSIFITGINAPDGIAIDKDDNLWICANQEDDIIVLDKTGKVIAK
                     LGDFNGIDKRGVVRGLLFPASLAFSLDRKTLYVSNLTLFLPFAGAQAAVDSPWTLEVK
                     RYSVAKLRAAIPPLNDDDEH"
     gene            complement(2369..2611)
                     /locus_tag="VLJ17_12340"
     CDS             complement(2369..2611)
                     /locus_tag="VLJ17_12340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23803.1"
                     /translation="MTLNWKIVLSAAGVAALLASPATAKERTREMPPSLINVPADAQA
                     SIRPNGSAVTVYSPDVKVQPHPINGLNPDFQLGSDK"
     gene            2973..4658
                     /locus_tag="VLJ17_12345"
     CDS             2973..4658
                     /locus_tag="VLJ17_12345"
                     /inference="COORDINATES: protein motif:HMM:NF013086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HSV23804.1"
                     /translation="MHVETDVLVIGSGGAGMYAAIEAARSGAEVLLADRSLIGRGGAT
                     VMAQMTVAVALGSHTPDDWTFHLRDTLQAGRGLCDQRLSRLLCEEGPDCILQMEAWGV
                     GWARKDGRIMAAMAPGHDRARCVYVDFLNTGPAVSKTLRAVVNKTSGIRKAGDLLITD
                     LVSYDGEVVGATALHLASGAPITIAAKATIVATGGLTRLYRRNSASANMGGDGYALAL
                     RAGAPLIDMEFVQFFPIGHLAPRLIGMDPIMWDPFRYKLGGRLLNGLGQEFTSRYGSH
                     EDGAYVLTRDLATYAIVKEVEAGRGSPHGGAYLSFEHCPEGDLRAAFGPVIDRLAMNA
                     IDLTRMPVEVAPIAHYHMGGVAADARMETEIPGLLVAGEAVGGANGANRLSGNAVTEA
                     LVFGRRAGRSAAARVAGMTWQPFRPRAAEVALDLLAADGAPDAPNSADMIERLQAVMA
                     NDVGPFRTRERLERATARIDDLAGQLGERPFGDGERFDMRRIDWFDLRNMVLVARVVA
                     QAALRRTESRGAHQREDFPRLRPEWCVNQVVRWRDACVDLVSISPIQAPAVAQ"
     gene            4655..4990
                     /locus_tag="VLJ17_12350"
     CDS             4655..4990
                     /locus_tag="VLJ17_12350"
                     /inference="COORDINATES: protein motif:HMM:NF024485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HSV23805.1"
                     /translation="MTAIARLRVWRGLVPQTGQFEIYEVPFEPGQSVLDGLRWIRANR
                     DPTLAIRFSCINANACKECMVEIDGDTAYACTARLEPREMTVQPLSNKTLVRDLVTEI
                     APPAERFRT"
     gene            5182..7074
                     /locus_tag="VLJ17_12355"
     CDS             5182..7074
                     /locus_tag="VLJ17_12355"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HSV23806.1"
                     /translation="MAFPRVRFWDSRCLRTLRGSLIWMVVGCVLPAWIGIAGLIYSMY
                     ASEHERAAQNEVMTARALVLALDRYLATAQTAMEVLAKSPELETDDFAAFHRRASELI
                     RQLPGNNIVLRDQSGQQLVNTLKPFGQELPLDPNSGVLAQVFSTGKSAISNLFFGPVA
                     KKHLIAIEVPVFRDGKVKYCLAIAVFAERIGDLLSDQKLPPGWLATIFDTSGTIVART
                     QNQDRFVGQLGSLDLREMITRQPSGFLYSISREGIPLYSGFSRSAVSNWAVAVGVPVA
                     VMDHELYAFLGLSGAGALVILGFGIGLTGVKSRQIASEVKALIAPAMAFGRGEAPIIP
                     RLRIREINDVASQLEKAFGLLQLRTLERDQAENERMAAKRTAELKDEFIATVSHELRT
                     PLTSIAVSLELLADQEDADRSKPTSELLAIARTNSERLGRLVNDILDIEKLEAGKVPF
                     DMQRVDVGTLLQQVLDANRPLVESFGVTLRFENTSRNDVYADPDRLIQVATNLLSNAC
                     KFSPAGAEVVVRAEDRGDKIRISVRDHGPGIPEGFRHRVFEKFAQADNSDARQNPGTG
                     LGLSIVKQIVQRLAGEIAFTDAPGGGTIFFFDLPAIEGAGDNDALSAILRNRVSASRL
                     CESEAA"
     gene            7122..9479
                     /locus_tag="VLJ17_12360"
     CDS             7122..9479
                     /locus_tag="VLJ17_12360"
                     /inference="COORDINATES: protein motif:HMM:NF017081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHASE domain-containing protein"
                     /protein_id="HSV23807.1"
                     /translation="MARTWYYVGAVATLAAAYYVTGRLGLLLAVPPGYATIIWPPSGV
                     SIAALLLYGWRLWPGILVGSFILNCYISSAFSPADGFVTAKVVAAFGIAAGSTLQALA
                     ARVLVKRCVGLPLKLAHVTQVVRLLFLSSPLSCLIAATIGIGTLFLLGLMPPEQTVGN
                     WFTWWVGDAFGVIVFLPLALVAPGTPNRITWRGDPLGSLPVIAMVTLCVPLGLTLYSW
                     KIMSEMAYRDGQSNFQTLALEYEKALQHQLGSYNHALLGAEGLLQQGTFVSRQQWRGY
                     VEALDVQTNFPGMLGLGWIAQVQPDRIPEFLMQQRNDGALDFTIHPQAADRPYYIVTY
                     IEPVHLNQSAPGLNIAFEDRRLEAAALARDSGQSTITKFITLVQDDAKTVGFLLLHPV
                     YDRHAPIKTAQERQAALLGWIYAPFTARNFLQSLPLSQSNSLKVSIYDGDIESPDTLI
                     YTSNEARSSNISGAFTVRKQLNVAQQKWQVVWNSTTAYEQSVQNSSALFILVGGVLFT
                     GLFGAVLLMMSRMERNRAAARSARLKDEFIATVSHELRTPLTSIAVSLELLADQEDAN
                     RSAPANELLAIARTNSERLARLVNDILDIEKLEAGKVSFDMQRVNIVSFVQRALDINL
                     PMAASCGVTLRFENASRNDVYADPDRLMQVATNLLSNACKFSPAGAEVVVKAEDRGDK
                     IRISVRDHGSGIPGRFRHRIFEKFAQADNSDKRQKVGTGLGLSIVKEIVERLGGEVSF
                     TDAPGGGTIFFFDLPALGRASDNDTLSTISQSYGSISRPRESEAA"
     gene            9476..10750
                     /locus_tag="VLJ17_12365"
     CDS             9476..10750
                     /locus_tag="VLJ17_12365"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV23808.1"
                     /translation="MTYRILHVDDERDICRLVELSLSWDPGLTVRCCASGKEAVEVAA
                     EWSPHLILCDIMMPLMDGPATLTCLRKNPRTAGIPLIFMTARVQARELDRFKSLGASG
                     VIAKPFSAKGLRESVRSYLQVAEDESAPHRAQAAESELALGHDRAAEVAAERDAFRNR
                     LQADAITLAKLRAGHRSDPASNAILQELQTLAHKLAGAAGCFAFEEVGQAASALEESI
                     VQKRSGGGTASVEADIDALVDRLEREQSHDREPIRQGRAEGLDVNVVAASSGAATLGG
                     IENVQTHTSQDKVSGRPKILIVDDDPDIGQFLSSRLRKMGAEPLFAADGVEGYRIAQR
                     EKPDVIISDYFMPVGNINFLLWKLRTTPATENTPVLVISGWQLDKLTEENLKKDVCGR
                     AGAAAVFSKPIDIQELFGTLRGVCQLTETLTQ"
     gene            11058..12176
                     /locus_tag="VLJ17_12370"
     CDS             11058..12176
                     /locus_tag="VLJ17_12370"
                     /inference="COORDINATES: protein motif:HMM:NF024376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhnD/SsuA/transferrin family substrate-binding
                     protein"
                     /protein_id="HSV23809.1"
                     /translation="MPDVPISIASGEYDRIRGIRDGIVEVEGCAVTYHVVEPNKLFVR
                     NLKNQEFDVSEMSFSTYIALRNQGKAHYTAIPVFLSRAFRHSAIFVRADGGIASPSDL
                     RGKRVGTPEYFTTMLVWMRGLLSDEYGIKPSDLRWRVGPMEQPAQPMPLPAASAPSSL
                     VGQGQGGGARDSGNVVRPRPTPSAQGGGERDGAADVEIETISTGKTLAGMLADGELDA
                     VFSARPPSCFVQTPPYPPAPAGEGRVTRLFPDYRSAEQAYYRKAGIYPLMHAMGIRNS
                     LVEQHPWMAGNLFNAFVRAKEIAVADFEKLSAFALTLPWIEAEYRATQAVLGRDIWPY
                     GVEANRKAIDTLCRYLHEQGFTTRRMGADELFAPLMPR"
     gene            complement(12309..14105)
                     /locus_tag="VLJ17_12375"
     CDS             complement(12309..14105)
                     /locus_tag="VLJ17_12375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012592181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSV23810.1"
                     /translation="MTSTLAAHAPTGRSDRLEFRFGIATDQGARDRNEDCVVCYPGRH
                     GQQAHVGSVAVIAGAVGGAKGGRVAAELAVTTFIDGHLSQNSTIGVQRNCARVVAAIN
                     RWIHSISRWDSALAGMACTLTAVILRGRQIHVIHVGDGRAYRLRDERLERLTTDHTMH
                     GAGLHHVVTRALGAEESIRVDYSVDTMRIHDRYLLCSDGIHGGVSDRRLAEILGRRGG
                     PQDAAHDLVEAGLASQAGDNATALVIDIIGLPPPNQIDLEIATATLPLLSLPKIGAVV
                     DGFLLRSILADGLYTKLFVADDQLKQRRVVVKFPKPVADAEGALRAAFLREAWIASRV
                     RSPFVGDVLELSPNRQTGLYAVMPFYEGETLEARLMRSPPLSIITGLDYAIKLAKGVA
                     ALHRAGIIHRDIKPENVILEMIRDHQLPGLKLIDLGVARLPHIEDFPTRHAPGTPSYM
                     APELFAGMAGDERSDQYALGVTIYRMFARAYPYGEIEPFSRPRMKKPRSLLGYRPDLP
                     AWLDQAIARATAVNPDDRFQDVFEFIFELEHGAMRGVPAAPTRQPLYERNPLLFWKIV
                     SALLALALAGSLAVHLPHHNPPIPSRANSTQR"
     gene            14393..15604
                     /locus_tag="VLJ17_12380"
     CDS             14393..15604
                     /locus_tag="VLJ17_12380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012592721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite transporter"
                     /protein_id="HSV23811.1"
                     /translation="MSHKSFFRAGDLPTLLASFFYFDMSFMVWVMLGPLGVQISQDLH
                     FDAAQKGLMVAVPLLAGALLRVVNGVLADWIGPKSTGLIGQIVVIVGLVSAWYFEISS
                     FGQIVALGAVLGVAGASFAVALPLASRWYPPEYQGIALGIAGAGNSGTVFAALFAPSL
                     AAAFGWNNVLGLAAIPLSVALIVYITYAKDAPNPPPARGLLAYLSVLRVADAWWLMFF
                     YAVTFGGFSGLASSLTIYFNAEYGLSPIAAGYFTAAAVFAGSLVRPLGGALADRIGGI
                     RALTIVYVIAATAVAIASTHFPRAWTALIFFVAGMLALGMGNGSVFQLVPQRFHKEIG
                     VMTGLVGMTGGIGGFYLASSLGYSKQFTGSYQVGLLAFAALAALALVGLFSVKTRWRT
                     TWGATLVSARI"
     gene            complement(15683..15940)
                     /locus_tag="VLJ17_12385"
     CDS             complement(15683..15940)
                     /locus_tag="VLJ17_12385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23812.1"
                     /translation="MIGDDCRATEGAAPLSIWMARTPSATRSSAFSQLTGSNAAPLRS
                     RMSGEASQPEVSRNSGGKALAAQTAFVGREIARYNCRAIMV"
     gene            complement(15937..>16427)
                     /locus_tag="VLJ17_12390"
     CDS             complement(15937..>16427)
                     /locus_tag="VLJ17_12390"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HSV23813.1"
                     /translation="IVIDTPKTYLYYVLGDGRAIRYGIGVGRDGFTWSGVQSVARKAE
                     WPDWTPPAEMLARQPYLPRFMAGGPGNPLGARAIYLGDTIYRIHGTNQPSTIGGHVSS
                     GCIRMVNDDVVDLYSRVELGTKVVVLPAEAYRNKDQIGQNRPGSTQLSLAENRPRAVW
                     LR"
BASE COUNT         3253 a         4769 c         5036 g         3369 t
ORIGIN      
        1 cgacggcgtt gaattgatgc ggctcggcaa ggctggcgtg tcgggctcag gccccgacct
       61 gttcgaccag ccaaacgaca tcgtggtggc gccgagtggc gacatttttg tcaccgatag
      121 ccaccgccgg ggcaaaaaca accgcgtggt caagttcgac aaaatcggca agttcatcaa
      181 ggagtggggc cacaaaggct ctggccccgg tgaactctcc gagccgcatg ctatcgcgat
      241 ggatagccag ggccgcttat tcgtcggcga ccgcgagaac aaccgtatcc agatcttcga
      301 ccaggacggc aaggtgctcg atgaatggca ccagttcggc cgcccgagtg gcatctacat
      361 cacccgcgac gacaccatct atgtggcaga ttccgaatcc ggccccaaca ccggcgcgaa
      421 cgagctgatg ggaatccgca agggcatccg catcggcagc gcgcgcgacg gtaaagtgtt
      481 tgccttcatt gaggatatgg agtcgacaac gcccgaccat tccggcgccg aaggcctcgg
      541 ggtcgatgcc caaggcaacg tctacggagc cgtggtgcgg cggcagatgc tggagcgcca
      601 cgttaagtag gcgccccata tgtacaagct gattggaatc atcttggccg cgatgccggt
      661 cattctcttc ctgcgcgcca tgttcatggg atcgagaaag cgatcacagg ccgtatccaa
      721 tttcaagaag caggtcgact atctggtgtg ggcgatcttg tttatgatcg gctgcgggct
      781 cgtcttttcg atcggcaaat tgatctacga catgcgcgcg atcgcaccac attcgtaggg
      841 cgggttagtt ctccgtccga tattgattag acaaattctc gtttgtcatg cgcgcgcttg
      901 tcgcgggcaa ccacttggtg ccaagtctcc gcaagcgggg atggccggga caagccggcc
      961 atgactccgc acacgagggc tcaacgcaat caagagatgc actggcgcaa tgcgcgcttg
     1021 cgttgccaca gtggggggta cagcgaaacc cgccttacga ctgccgctgc cgcaccaccg
     1081 tcaatgctcg tcgtcatcat tgagcggcgg gatcgcagcg cgaagttttg caaccgagta
     1141 gcgcttgacc tcaagcgtcc acggcgaatc gaccgcggcc tgcgcccccg cgaagggcag
     1201 gaacagggtc aggttcgata cgtacagggt cttgcggtcc aagctaaacg ccaggctcgc
     1261 cggaaacagc aggccgcgca cgacgccgcg tttgtcgatt ccgttgaagt cgcccagctt
     1321 cgcgatcacc ttgccggtct tgtcgagcac aatgatgtcg tcttcctggt tggcgcagat
     1381 ccagagatta tcgtctttgt cgatcgcgat cccgtctgga gcattgatgc cagtgatgaa
     1441 gattgatggc gtgccagccg ttccgcccgg gttgaccgga atctgaatga tctgatggaa
     1501 tgcggtgttg gccacataca ttatagtgcc ggcattgttg aattcgacgc cgttcgcccc
     1561 gaatggcggc gtcaggccgg ttccgggtcc gagcagcgga ctgctgctcc agatcgtcgg
     1621 cgtgccgccg ccgggacccg ttttccaaat gatgccattg aacgaatccg atacgtaaac
     1681 attgccaaac ttgtcgaacg tcagcgcatt gaggccggcg cccgccagtg tcggcgtcat
     1741 gaactccgaa gaggcgcctg tcgtcgggtc cacgcgcagg acttttccgg cgccaaagtc
     1801 gatgatcagg agatttccat tggccgggtt gaagcccaat cccaacatgt ggggacttga
     1861 attggcgatc gtgacttggc gcaacaactt gccgtttggc ctgatgacaa agagtgcagc
     1921 gttaccgcta agcgcgcctt tggtgttgaa gccaaaacta ggaacataga tatttccgtc
     1981 aggtccaacg gtcaggcctt cgacgctcga cggctgtccg ggcgtcacat ctggcagaac
     2041 cgccagaacg tcgacgtcgc cgcggtccca cgcacctgca ggcgcaactg tcaatacccc
     2101 gacggcaagt ccaaacgctg caatgactac cccacgcctt gtcatgtcgt ccctccctat
     2161 cgggccggcg ctccccgagt ttctccgggg ggcggcctct atcgggacca tctcacgggc
     2221 actatgcgac cgcaactggt tttagggcat gcgccaagcc gtgcatggaa cgggaatttc
     2281 tgcggcacca cgtggggacg ttgataaaaa atcgccgggc ggagggcgcc gcccggcgaa
     2341 taggccactt tggaaataaa gtggatgcct atttgtcaga gcccaactgg aagtcggggt
     2401 tcagaccatt gatcggatgc ggctggacct tcacgtcggg agaatacacc gtgacggccg
     2461 acccattcgg cctgatggag gcctgtgcat cggccggcac attaatcaac gagggcggca
     2521 tctcccgggt ccgctccttg gccgtggcgg gggacgccag caaagccgca acgccagctg
     2581 cagatagtac gattttccaa ttcaatgtca tgttcaacct cttgttttca agtcgttgcc
     2641 ctggccgaga actagcactg attctgcaat gcacaaggcg tttcatcatc acaaagcagt
     2701 gcgagaatgt atagcgttta tatgggttta atgccacaat acggcaaaat cgtagggctc
     2761 ttacaggccg cgagcaattt gtcgcaccgc agtgcaatag agggaaatta ttaccgtcct
     2821 gtacttcatt tccgtgacat acactcattc cttgggggcg gggcggccaa acatgtgcaa
     2881 caagttgtca atgcgatatg caccgatggg atgactcgcg cgaaacaaaa agccgtcctc
     2941 gagctatggt gacaggggcc tcccgagggg ccatgcatgt cgaaaccgac gtgctcgtaa
     3001 ttggatcggg cggcgccggc atgtatgcgg cgatcgaggc cgcacgatcg ggtgccgagg
     3061 tcttgctggc ggatcgcagt ctgattggcc ggggcggggc caccgtgatg gcccagatga
     3121 cggtcgcagt cgcgctcgga tcgcatacgc cggatgattg gacttttcat ttacgcgaca
     3181 cactccaggc gggccgtgga ctatgcgacc aacgcctgtc gcggctccta tgcgaggagg
     3241 ggccggattg catcctccag atggaggctt ggggcgtcgg ctgggcccgc aaggatggcc
     3301 gcatcatggc cgccatggcg cctggccacg accgggcacg ctgcgtctat gtggatttcc
     3361 tcaacaccgg accggcggta tcgaagacct tacgcgccgt ggtcaacaag acgtcgggca
     3421 ttcgcaaggc cggcgatttg ctcatcactg atctcgtaag ttatgacggc gaggtggtag
     3481 gagcaactgc gctgcatctt gcgtccggcg cgccgatcac tatcgcagcc aaggccacca
     3541 tcgtcgccac cggcgggctg acgcggctgt accggcgtaa tagcgcgtcg gccaatatgg
     3601 gcggtgacgg ctatgcgctg gcattgcggg cgggcgcgcc gctcatcgac atggagttcg
     3661 tgcagttctt tccgatcggc cacttggcgc cgcgcttgat cggcatggat ccgatcatgt
     3721 gggatccgtt ccgctacaag ctagggggac ggctgctcaa cggcctcggc caggagttca
     3781 cgtcgcgcta tgggtcgcac gaggacggcg cctatgtgct gacccgcgac cttgcgacct
     3841 atgccatcgt caaggaagtg gaggccggcc gcggctcgcc tcacggtggc gcctatctga
     3901 gctttgaaca ttgcccggag ggcgatttgc gcgcggcgtt cgggccggtc atcgatcggc
     3961 tggccatgaa cgccatcgac ctcacccgaa tgccggtcga agttgccccg atcgcccact
     4021 atcatatggg cggcgtcgcg gcagatgccc gcatggaaac cgaaatcccc gggctcctgg
     4081 tcgccggcga ggccgtcggc ggcgccaacg gtgctaatcg gctgtctggc aatgcggtga
     4141 ccgaggcgct ggtgtttggc cgccgcgccg gacgcagcgc cgccgcgcgc gttgccggga
     4201 tgacgtggca gccatttcgg ccgcgggcag ccgaggtcgc gcttgatctc ctcgccgcgg
     4261 atggcgcacc ggatgctccc aattcggcgg atatgattga gcgcctgcag gccgtcatgg
     4321 cgaacgacgt ggggccgttt cgtacgcggg aacggctcga acgcgccacc gctcggatcg
     4381 acgaccttgc cgggcaactc ggcgagcgtc cgtttggcga cggtgagcgt ttcgacatgc
     4441 gtcgcatcga ctggttcgac ctgcgcaaca tggtgctcgt cgcccgtgtc gtggctcagg
     4501 cggcgttgcg gcgtactgaa agccgcggtg cccaccagcg cgaggatttc ccccgcttgc
     4561 ggcccgaatg gtgcgtcaac caggtggtgc gatggcgcga cgcgtgcgtc gatctcgtgt
     4621 cgatatcgcc cattcaagcg ccggcagttg cgcaatgact gcgatcgcac gattgcgggt
     4681 ctggcgcggg cttgtgccgc aaaccgggca attcgagatc tacgaagtgc cgttcgaacc
     4741 tggccagtcg gtactcgacg gcctgcgctg gatccgggcc aaccgcgatc ccaccctggc
     4801 gatccggttc tcctgcatta acgccaatgc ctgcaaggaa tgcatggtgg agatcgacgg
     4861 agacacggcc tacgcctgca ccgcacgact ggagccgcgc gagatgacgg tgcagccgct
     4921 gtcaaacaag acgttggttc gcgacctcgt caccgagatc gcgcccccgg cggaaaggtt
     4981 caggacgtga taatatcagg acctgcgaat taccaaatcc ataaactaaa gtttgagtca
     5041 tgcctattat ggcgggttta gggttttatt ggataaggtc aacctacaaa cgagtggata
     5101 tcagatcgaa acctctcccg tggagtatcg attaggcaaa taggatcgca tcaggccgaa
     5161 agccacacga aagcaaagtc catggcattc ccgcgtgttc gcttctggga cagccgatgt
     5221 ctgcgcacgc tgcggggcag cctgatctgg atggtggtcg gttgcgttct gccggcttgg
     5281 atcggcatcg ccggtctgat ttacagcatg tatgcgagtg agcacgagcg ggccgctcaa
     5341 aacgaagtca tgaccgcgcg tgcgctcgtt ctcgcgcttg accgctatct tgccactgcc
     5401 cagaccgcca tggaggtgct ggcgaagtct ccggaactcg aaacggacga ttttgccgcc
     5461 tttcataggc gggccagcga gttgatccgg caattgccag gcaacaatat tgtcctacgc
     5521 gaccaatcag gccagcagct cgtcaatact cttaagcctt tcgggcagga gctgccgctg
     5581 gatccgaata gcggggtcct ggctcaggta ttcagcactg gcaagtctgc catcagcaat
     5641 ttgttcttcg ggcccgtcgc aaaaaaacat ctgatcgcga tcgaggtccc ggtgttccgt
     5701 gacggcaaag tgaaatactg ccttgccatc gcagtgttcg ctgaacgtat tggtgacctc
     5761 ctgagcgatc aaaagctgcc gccggggtgg ctagccacga tctttgacac atccggaact
     5821 attgtcgctc gtacccagaa tcaagaccgg tttgtcggtc agcttggttc gcttgacctt
     5881 cgggagatga tcacacgcca accgagcggc ttcttgtatt cgatttcgcg tgaagggatt
     5941 ccgctctact ccgggttcag ccggtccgcg gtctcgaatt gggctgtggc agttggcgtg
     6001 ccggtggccg tgatggatca cgagttgtac gcattcctcg gattgagcgg cgcaggcgcg
     6061 ctggtcatcc tggggttcgg cattgggttg accggagtca aatcaagaca gattgcgtcc
     6121 gaggtgaagg cgctgatagc gcccgcaatg gcttttggac gaggcgaggc gccaatcatt
     6181 ccacggctgc ggatccgtga aatcaacgat gtggcaagtc agctcgaaaa ggcctttggc
     6241 ctccttcagc tcagaacact ggagcgggat caggccgaga atgaacggat ggcggctaag
     6301 cgaaccgcgg agctcaaaga cgagttcatc gcaacagtga gccatgagct acgtacaccg
     6361 ctaacgtcga ttgcagtttc actcgaactc ctcgctgatc aagaagatgc cgatcgatca
     6421 aagccaacga gcgaactgct ggcgattgca agaacgaaca gtgagcggtt gggtcgactg
     6481 gtaaatgaca ttctggacat tgagaagctc gaggccggga aggtcccatt cgatatgcaa
     6541 cgcgtcgacg ttgggacgct gctccaacag gtactcgatg ccaatcgacc gctggtcgag
     6601 agtttcggcg tgacactacg tttcgagaat acgtctcgca acgatgtcta cgccgaccct
     6661 gaccggctga tacaggtcgc caccaacctt ctgtccaatg catgtaagtt ctcgcctgcc
     6721 ggggcggagg ttgtcgtaag ggcggaggat cgtggcgaca agatccgcat ctccgtcaga
     6781 gatcacggtc ccggtattcc ggaaggtttc agacatcgcg tattcgaaaa gttcgcccag
     6841 gccgacaatt ccgatgcgcg gcaaaatccg ggcaccgggc tcgggttaag tattgtgaag
     6901 cagattgttc aacggctcgc cggcgaaatc gcctttacgg acgcacccgg cggcggaacg
     6961 atattctttt tcgatctgcc cgccatcgaa ggcgccggtg ataatgacgc gctaagcgca
     7021 attttacgga atcgtgtgtc cgctagccgg ctttgcgaat cggaggcagc atgacgccgc
     7081 ttcgtattct ccaccttcca accgtgcagc ggcctcacgc catggcgcgt acatggtact
     7141 acgtaggcgc ggtggcgaca cttgcggcgg catactacgt gacgggaagg ctgggcctgc
     7201 tgctagccgt gccgccggga tacgccacga tcatttggcc gccatcaggc gtcagcatcg
     7261 cggcgctact cctgtatggg tggcgtctat ggccgggcat ccttgtcggt tcttttatcc
     7321 tcaattgtta catttcaagc gcgttctcgc cagcagacgg atttgttacc gcaaaggtcg
     7381 tggcggcgtt cggtattgcg gctggttcca ccctgcaggc gctcgccgca cgtgtgctgg
     7441 taaaacgttg cgtcgggctt ccgctaaagc tcgcacatgt gacgcaggtg gtcaggctcc
     7501 tcttcctgag cagcccgctg tcctgcctga tcgccgcaac aatcggcatc ggcacgcttt
     7561 ttctcttggg gctgatgccg ccagaacaaa cagtaggcaa ctggttcacc tggtgggtcg
     7621 gtgacgcctt cggcgtgatc gtgttcttgc cattggcgct cgtagcgcct ggcaccccca
     7681 accggattac ctggcgcggc gatccgcttg gatcgctgcc ggtcatcgcg atggtgacgc
     7741 tgtgcgtgcc tctcggcctg acgctttata gctggaagat tatgtccgag atggcctacc
     7801 gtgatggaca atcaaacttc caaacgctgg cgctggaata tgaaaaggcg ttgcagcatc
     7861 agttgggctc gtacaaccac gccctactag gagcagaagg ccttttgcag caagggacct
     7921 tcgtttcgcg ccagcaatgg cgcggttacg tggaagcgct tgatgtgcaa accaattttc
     7981 caggcatgct cggtctcggt tggattgcgc aggtgcagcc cgaccgaatt ccagaattcc
     8041 ttatgcagca acgcaatgac ggagcgctcg atttcaccat tcatccgcag gccgcagatc
     8101 gcccctacta tatcgtcacc tatatcgaac cggtccactt gaatcagtcg gcgccggggc
     8161 tgaatatcgc atttgaagat aggcgtttgg aagcggcggc gctggcgcgg gacagcggcc
     8221 aatcgacgat tacaaaattt attactctcg tgcaggatga cgcaaaaacg gttggcttcc
     8281 tgctcctgca tcccgtctat gaccgtcacg cgcccataaa gaccgcgcaa gagcgccaag
     8341 cggcgttact tggatggatc tatgctccgt tcaccgcacg taattttctg caaagtttgc
     8401 ccctaagcca aagcaattcg ctcaaggtta gtatctatga tggtgatatc gagtctcctg
     8461 acacactgat ctacaccagc aatgaagcgc gatcgtcaaa tatcagcggt gcatttacgg
     8521 tgcgcaaaca gttaaatgtc gcgcagcaga aatggcaggt ggtgtggaac agcaccactg
     8581 cttacgagca gagcgtacaa aatagcagtg cgctcttcat cctggtggga ggtgtgctct
     8641 ttaccggact ctttggagca gtcctactaa tgatgtcccg tatggagcgc aacagagcgg
     8701 ccgcgcgaag cgcgcgactt aaagacgagt tcatagcaac ggtgagccat gagctgcgta
     8761 caccattgac gtcgattgca gtttcgctcg aactcctcgc cgaccaagag gacgccaatc
     8821 gatcagcgcc ggcgaacgaa ttgctcgcga tcgctagaac gaacagtgag cggctggctc
     8881 gacttgtcaa cgacatcctg gacattgaga aacttgaggc cggaaaggtc tcgttcgata
     8941 tgcagcgtgt caacatcgtg tcgttcgtgc aacgggcgct tgatatcaat ctaccgatgg
     9001 ccgcgagttg cggcgtgacg ctgcgcttcg agaatgcctc tcgaaacgat gtctacgccg
     9061 atcctgatcg cctgatgcag gtcgccacca accttctgtc caatgcgtgc aagttctcgc
     9121 cggctggggc ggaggttgtg gtaaaggcgg aggatcgcgg tgacaagatc cgcatctccg
     9181 tcagggacca cggctccggc attccgggac gtttcaggca tcgcatattt gaaaagttcg
     9241 cccaggccga caattctgat aagcggcaaa aagttggaac tgggcttggg ctaagtatcg
     9301 taaaagagat tgttgagcgg ctcggcggcg aagtcagctt taccgacgca cctggcggcg
     9361 gaacgatatt ctttttcgat ctgcccgcgc tgggacgtgc cagcgacaat gacaccctga
     9421 gtacaatttc acagagttac gggtcgatca gccgacctcg tgaatcggag gccgcatgac
     9481 atatcgtatt cttcacgttg atgatgaacg tgacatctgc aggctggtgg agctttcgtt
     9541 gagttgggac cctggcttga cggttcgatg ctgcgcctcc ggcaaggaag ccgttgaggt
     9601 agcggcagag tggtcgcccc acttgattct ctgcgatatc atgatgccat tgatggatgg
     9661 ccccgctacg ctcacgtgcc tgcgcaaaaa tccgcgtact gctgggattc cgttgatatt
     9721 catgaccgcg cgggtacagg cacgagagct ggaccgtttc aagtcgctcg gcgccagtgg
     9781 cgtgatcgcg aagccgttca gcgcgaaagg tctccgcgaa tcggtccgga gctatttgca
     9841 ggtagcagaa gatgaatcgg cgccgcatcg cgcacaggcc gctgagagcg aattggcttt
     9901 gggtcacgac cgagccgcag aggttgcggc ggagcgcgat gcatttcgca accgcttgca
     9961 ggcagacgcg atcacgctgg ccaaactgcg cgcggggcat cggagcgatc cggcttcaaa
    10021 cgctattctc caggaacttc agaccttggc tcataaattg gccggagccg ccggctgctt
    10081 tgcattcgag gaggtgggcc aggcagcttc ggcgctcgaa gagtccattg ttcagaagcg
    10141 gtccggcggc gggacggcaa gcgtcgaagc tgacatagat gccttagttg atcgcctcga
    10201 acgcgagcag tcgcatgatc gcgagcccat ccggcaaggc agagctgaag gtttggacgt
    10261 gaatgtcgtg gcggcgagca gcggtgcggc aacgctcggc ggtattgaga acgtgcaaac
    10321 gcatacgtct caagacaagg tgtcgggacg accgaagatc ctcatcgtcg atgatgatcc
    10381 ggacatcggg caattcctca gcagtcgcct tcgcaagatg ggagcagaac cgctgttcgc
    10441 cgctgatggc gttgaggggt accgcattgc gcagcgcgag aaaccagacg tcatcatatc
    10501 cgattatttc atgccggtcg gaaacattaa ctttttgcta tggaaattac gaaccacacc
    10561 ggcgactgag aacaccccgg tcctggtgat tagcggatgg caactcgata aattgaccga
    10621 agagaatctg aagaaagacg tttgcggtcg ggccggtgcc gcagcagtgt tctcgaagcc
    10681 tattgatatt caggaactgt ttgggacttt acgaggcgtc tgccaactta ctgagacctt
    10741 aacacagtga atttgactgg ttgggaccag acagagcggc tcatgaatgc agccctcgtg
    10801 cacccgtgcg tacgcgaaac atgttcccgc gaaaggcggg gagcgggtga cccaataacc
    10861 ccgacgatgc tgcggaggat tcctttcccg ggaatgacac cctgctaggc caccgggtca
    10921 cctggacttg cgctgtttgc gcaggcaatt gacgacgccg tccatgcccc tcttgtgaat
    10981 gcatcccacg cgggcgttat attgtggcgg caaacgcgcg cccaaccaat gctgcccgca
    11041 cgacggggaa tgcccccatg cctgacgttc ccatctcgat cgcatccgga gaatacgatc
    11101 gcatccgcgg cattcgggat ggcatcgtgg aggtcgaagg ctgcgccgtc acgtaccacg
    11161 tggtcgagcc gaataagctg ttcgtgcgca acctgaaaaa ccaggaattc gacgtctcgg
    11221 agatgtcgtt ttcgacatac attgccctgc gcaatcaggg caaggcgcac tacaccgcga
    11281 tcccggtatt tttatcccgc gccttccggc attcggcgat cttcgtgcgc gccgacggcg
    11341 gcatcgcgtc gccgagcgat cttcgtggca aacgcgtcgg cacgcccgaa tatttcacca
    11401 ccatgctggt gtggatgcgc gggctcctgt ctgacgaata cggaatcaag ccatcggact
    11461 tgcgctggcg ggttggtcca atggagcagc cggcgcaacc gatgccgctg cccgccgcat
    11521 ctgctccctc ctcgcttgtg gggcagggtc aaggtggggg agcgagggat tctggcaatg
    11581 ttgtgcggcc tcgcccaacc ccttccgcac aagggggagg ggagagggac ggtgccgcgg
    11641 acgtcgagat cgagaccatc tcgactggca agacgctcgc cggaatgctg gccgacggcg
    11701 aactcgacgc cgtgttctcg gcccggccgc cgtcgtgttt cgtgcagacc cctccctacc
    11761 ctcccgcgcc cgcaggggaa ggtagggtaa cgcggctatt ccccgactat cgctcggccg
    11821 agcaggctta ttaccggaaa gccggcattt atccgctgat gcacgcgatg ggtatccgta
    11881 acagcctggt ggagcagcat ccctggatgg ccggaaatct tttcaatgcg ttcgtcagag
    11941 ccaaggagat cgcagtcgcg gatttcgaga agctgtccgc cttcgcgctg acactacctt
    12001 ggatcgaagc cgaataccgc gccacgcagg cggtgctggg ccgcgatatc tggccttacg
    12061 gggtggaggc aaaccgtaaa gcgatcgata cgttgtgccg ctatctgcac gaacaaggat
    12121 tcacgacgcg gcggatgggc gcggacgagt tgtttgcgcc gctgatgccg agatgagaag
    12181 cgcgtttagc acactggtgt gcgccatagc ggcgcaagtg ccgtaatgca aggcacatca
    12241 cctacaccac gatagtgaaa tcgtatcgct ctcgtgcaga cggcggttga atgcgcgccc
    12301 tatcgcatct atcgctgcgt cgaatttgcc cggctcggaa tgggtggatt gtgatggggc
    12361 aagtgcacgg ccagcgatcc agcaagcgcg agcgcaagca aggcagaaac aattttccag
    12421 aacaatagtg gattgcgctc gtagaggggc tgccgcgtgg gcgcggctgg cacgccccgc
    12481 atggcgccgt gttcaagttc gaagatgaac tcgaatacat cctggaaacg atcgtcggga
    12541 ttgaccgctg tggcgcgagc aatggcttga tcgagccacg ctggcaggtc cggccgatat
    12601 cccaaaagtg acctcggctt tttcatgcgc ggccgggaaa acggctcgat ctcgccgtac
    12661 ggatatgccc gcgcgaacat ccggtagatc gtgacgccga gcgcatattg gtcggagcgc
    12721 tcgtcaccag ccatgccagc gaacagttcc ggcgccatgt agctcggcgt tccaggcgcg
    12781 tgccgcgtcg gaaaatcttc gatgtgcggc aaccgcgcga cccctagatc gatgagcttg
    12841 agacccggca actgatggtc gcggatcatc tccaggatga cgttctcagg cttgatgtcg
    12901 cgatgtataa tgccggcccg gtgcaatgcc gcgactccct tggcgagctt gattgcatag
    12961 tcgagcccag tgatgatcga caggggtggc gagcgcatca gccgtgcctc cagggtctcg
    13021 ccttcataaa agggcatcac cgcatagagg ccagtctgcc gattggggga gagttcgagt
    13081 acatcgccca cgaatgggct gcgcacacgt gatgcgatcc aagcctcgcg taaaaaagcc
    13141 gcgcgcaacg ccccctccgc atcggccaca ggcttcggaa attttacgac gacccgtcgc
    13201 tgttttagct gatcgtcggc gacaaacaac ttggtgtaga ggccgtcggc caatatcgac
    13261 cgcaatagga agccatcgac gaccgcgccg atcttgggta acgagagcag cggcagagtt
    13321 gccgtcgcga tttcgaggtc gatctggttg gggggcggca gaccgataat gtcgatcaca
    13381 agtgccgttg cgttgtcgcc agcctgcgag gcgaggccgg cttcgaccaa gtcgtgcgca
    13441 gcatcctgtg gtccaccccg ccgtcccaat atttcggcga gccgccggtc cgatacgccg
    13501 ccatgtatac cgtcgctgca caacaaatag cggtcgtgga tgcgcatcgt gtcgaccgaa
    13561 tagtcgaccc ggatgctttc ctcggcgccg agcgctcgag tgacaacgtg atgtaatccc
    13621 gcgccgtgca tggtgtggtc ggttgtaagc cgttctagtc gttcgtcgcg caagcggtag
    13681 gcgcggccgt ctcccacatg gatgacgtgg atttggcgtc cgcgcaggat cacagccgtc
    13741 aacgtgcatg ccatgcccgc gagcgcgctg tcccaacggc taatcgaatg gatccagcgg
    13801 ttgattgccg ccaccacgcg ggcgcaattc cgctgaacgc cgatggtgga attctggctc
    13861 aaatggccat cgatgaaagt ggttaccgcg agctcagctg cgactcgtcc gcccttggcg
    13921 ccgccgaccg cgccagcgat gacggccacc gaaccgacgt gggcttgttg gccgtggcgg
    13981 cccggatagc aaaccacgca gtcttcgttg cggtcgcgcg caccctggtc ggttgctatc
    14041 ccgaagcgaa actctagtcg atcggatcgc ccagtcggtg cgtgtgctgc gagcgtcgac
    14101 gtcatgttca tctcttgaga attcgactca ttcgaccgac tcgaaacggc gttcgcgcag
    14161 gacgtctaat atttgcgcgc agcggcggat tataatgcaa agctgccgat cgcgataacc
    14221 gtgcggccag ccgcgattat ctcacggttg ccgccctctc caagcgcttc cgctgcaaaa
    14281 aactacagca gcgtcgctaa ttgcatttca tcccttatgc tctcattttt atcgggatta
    14341 cggatacgcc gggcggagtc catcgataca ctaagtgaag ctcttgcacc tcatgagcca
    14401 caagtcgttc tttcgcgcag gggatctgcc aacgcttttg gcatcattct tctacttcga
    14461 catgagcttc atggtgtggg tgatgcttgg tccacttggc gtgcagatat cacaggatct
    14521 ccatttcgat gccgcccaaa aaggactgat ggtggcggtg ccgctgctcg ccggtgcttt
    14581 actgcgtgtc gtgaacggtg tcttggccga ctggatcggt ccgaagtcca cgggattgat
    14641 cggccaaatt gtcgttatcg tcggcctcgt gtccgcctgg tactttgaga tcagctcctt
    14701 tggtcaaatt gttgcgctcg gcgccgtctt gggggttgcg ggagcttcgt ttgccgtagc
    14761 gctaccgctg gcttcgcggt ggtacccgcc ggaatatcag gggattgcac ttggtatcgc
    14821 aggggcggga aattcaggca cggtgttcgc agcgttgttt gcgccgagtc tcgcggcagc
    14881 gttcggctgg aacaatgtgc tgggattggc ggcgatccca ttgagcgttg cgctgatcgt
    14941 gtacatcact tacgcgaagg atgcaccgaa ccctccgccc gccaggggct tgctggcgta
    15001 tctctccgtc ttgagggtcg cagacgcatg gtggctcatg ttcttctacg cggtaacatt
    15061 cggtgggttc agcggcctcg cgtcgtcgct gaccatttac ttcaatgctg aatacggact
    15121 gagccctatc gccgccggat acttcacagc ggctgctgtg ttcgcggggt ctctcgtacg
    15181 tccactcggt ggggcacttg cggatcgcat cggcggcata cgggcactca cgatcgtgta
    15241 cgtgatcgcc gccacggcgg tggcaattgc gagcacacat tttccgcgcg cgtggacggc
    15301 gctcatattc tttgtcgcag gcatgctggc gctcgggatg ggcaacggtt cagtgttcca
    15361 gctggtgccg cagcgcttcc acaaggagat tggggttatg accggcctcg ttgggatgac
    15421 gggcggcatc ggaggtttct atttagcttc gagcctcggc tactcgaagc agttcaccgg
    15481 cagctatcag gtgggcctct tggcgtttgc tgccctcgcc gcgcttgcgc tcgtcgggct
    15541 cttcagcgtc aagacgcggt ggcgcaccac ctggggggcc acactcgtct cggcgcgaat
    15601 ttgattttag gcgacgggaa tgaccagcgg cgctggacgg tcctgacact actgcgcctc
    15661 gcagcgcggt atgagcgcaa tcctagacca tgatcgctcg gcagttgtac cgcgcaattt
    15721 ctcgaccaac aaaggcggtc tgcgccgcaa gggctttgcc acccgagttg cgcgacactt
    15781 cgggctggct ggcctcgccg ctcatgcgcg agcgcaaggg agccgcgttg cttcccgtca
    15841 gctgggagaa ggcactcgat cgcgtggcag agggtgtgcg cgccatccag atgctcaacg
    15901 gcgccgcgcc ctcggtggcg cggcagtcat caccgatcaa cgcaaccaga ccgctcgcgg
    15961 gcgattctcg gccagcgaaa gctgcgtcga gcccgggcgg ttttgcccga tctgatcctt
    16021 gttgcgatac gcctcggccg gtaatacgac cactttggtg ccgagctcga ctcggctgta
    16081 tagatcgact acatcgtcgt tgaccatgcg gatgcacccg ctcgaaacat ggccaccgat
    16141 ggtcgaaggc tgattggtgc cgtgaatgcg atagatcgta tcgccaagat agatggcgcg
    16201 cgcgccgagt ggattacccg ggccgccggc catgaaacgc ggtagatagg gctggcgggc
    16261 cagcatttct gccggcggcg tccagtccgg ccactcggcc ttccgcgcca ctgactgcac
    16321 acccgaccac gtgaaaccat cccggccaac gccaatgccg tagcgaatcg cccggccatc
    16381 accgagcacg taataaaggt acgtttttgg cgtgtcgatg acgatcg
//
LOCUS       DATILV010000540         6825 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2429894, whole genome shotgun sequence.
ACCESSION   DATILV010000540 DATILV010000000
VERSION     DATILV010000540.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6825)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6825)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6825
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2429894"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(40..942)
                     /locus_tag="VLJ17_12395"
     CDS             complement(40..942)
                     /locus_tag="VLJ17_12395"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSV23814.1"
                     /translation="MLLATAPLVLPEFWRRFLTEILIWGLLAMSSDILIGYTGMISFG
                     HSAFFGLGMYGAAAALLTVNPPNLWLAIGSGLIGAAGAALFVAYFSTRLRDIYFAITT
                     LIFSQIFYVIIFTWTEVTGGENGLTFRRPALSIPWIYATPFTNETLHWFVLAVVTASY
                     LILRRITQSPFGMVLQSIRENESRTRAIGYPVERYKMVAVMLSGIFAGLAGVLYAIQN
                     RFAAPDFVYFLVSGETVIFNVMGGVGTLVGPIVGAGFFLLLREAFSRFFTEYYLIPVG
                     IIFIAMVIFMPQGLLGFGRSWLNR"
     gene            complement(990..1886)
                     /locus_tag="VLJ17_12400"
     CDS             complement(990..1886)
                     /locus_tag="VLJ17_12400"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSV23815.1"
                     /translation="MDAALEVLAAIPWDQILIQTVNGIVTGMILALVASGLTLIFGIM
                     DVVNFAHGELFMLGAYFGVVVLATTGSFWIALLVASLMVALLGAALQIVTLRPLQGRD
                     PLTTILATFGISLVLQNYALWQFGPVARKIQEPFTGSFQLLYLEYPWYRLVIAGLSAV
                     IIGALWLFLKYGTWGIWIRATTQDRVMAQAMGIPVPWVHTAVFAIGAGMAAASGVLFG
                     PLVGVNHAMGLDWVLKAFIVVVIGGMGNLGGSIAAAIFISLLESYASIWVSPAQAVIV
                     SFVVLILTLLIRPTGLFVPTPK"
     gene            complement(1890..2627)
                     /locus_tag="VLJ17_12405"
     CDS             complement(1890..2627)
                     /locus_tag="VLJ17_12405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006610720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV23816.1"
                     /translation="MSAVHTPTEALVSVNNIHTYYGKSHILQGVTLHVGAGEVVGLLG
                     RNGVGKSTTLKTIMGLARPHQGEVLLTGRSITGLPAHHLARLGIGYVPEDRRIFRFLT
                     VMENLRTGLDRNGVTTVRKQELLDKVFTYFPVLAERRDQPGGTLSGGEQQMLAIARAM
                     MLEPRIILLDEPTEGLMPRMVSQISQIINALHREGVAILLVEQNVPLTLEASQRIYIM
                     EKGVVRHHCAASDIKVNDAVIHQYLGV"
     gene            complement(2624..3334)
                     /locus_tag="VLJ17_12410"
     CDS             complement(2624..3334)
                     /locus_tag="VLJ17_12410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008967995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV23817.1"
                     /translation="MTVRFGGLAALNHVNFEVGRGEIRAIIGPNGAGKSTFFNCLTGV
                     LRPSSGRILFKGEDITGLSSDRISRKGIARSYQITNILPNATTLENVRIAAQSRRHGW
                     SMFTHHSAYRDIIAKAEAVLESVGLRSKAAELAANLSHGEQRNLEIGIALATEPELLC
                     LDEPTAGMSAAETHDTMELVRRVAKNLTILIVEHDMQVVMELAQRITVLHYGEVLAEG
                     TPAEIQQNPKVLEVYLKT"
     gene            complement(3419..4720)
                     /locus_tag="VLJ17_12415"
     CDS             complement(3419..4720)
                     /locus_tag="VLJ17_12415"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV23818.1"
                     /translation="MAIDWNDQDRSNEFWYSGKVTRRRLIGYGAGVLGATALVPAPWR
                     TAFGQAKPYKIGTVQPLSGAGAAGGKTALVGVEMAVDRINKSGGINGRPIELVIADDE
                     SKPDVARRKAEKLVVEDKIDAQVGGFLSNICLACMPVWEEAKIVNMISVCLDTTLTTS
                     KCNRYSFRPCDYAPAQAVAFAPHLVGKMGKKWHIAYSDYAWGQSTRDAYADRIKKAGG
                     EVVGATGIPLGTADMTPFLSKISGNFDGLFGVFVGVDGVAVGNQAFDLGLTRKYKWAG
                     DGAIAESTNLPALGNKIEGFVGINRYLPLLEGPLDTAAHKKFLEEARVRLKKIDPTGP
                     LPDRYVQSNYESVNALKLGMEKSGFRGREDTMKLVEALEGLEMKEGDDFPQGDKVLRK
                     EDHQAFVREFIFEIKGGKHRILETVEKEKTLFPPACKFASA"
     gene            complement(4899..6086)
                     /locus_tag="VLJ17_12420"
     CDS             complement(4899..6086)
                     /locus_tag="VLJ17_12420"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV23819.1"
                     /translation="MRSLLLQIVAVTTINLKSISQRVLLSLSTVVAIALVVMVLLAFL
                     AMANGFQRTIAGSGSEDIGIVLRGGSQAEINSTVTREQVRLVEDGPGIARGSGGKPLV
                     SPELYLVVDGVKHTTKTKANLPLRGIGEQGFALRKGITVTAGRMFNRGVNEIVVGKGL
                     AREFDGFDLGSTVAFGTTRWTVVGIFDADGSVFESEIWADLPVVQSLFNRNNFFQTVR
                     ARLTTPASIDELKSYNDNDPRMKLDVKSEAAYFADQSSQTTDLIQKLGWPLAIAMAFG
                     ALAGALNTMYSSVTARATEIATLRAIGFGGFSAFVGTLIESLLLAAIGGVIGAALTYA
                     IFDGISASTLGGNFTQVVFNFRLSPALVGEGVVLALVVGLLGGLFPALRAARMPIVAG
                     LYA"
     gene            complement(6092..>6825)
                     /locus_tag="VLJ17_12425"
     CDS             complement(6092..>6825)
                     /locus_tag="VLJ17_12425"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HSV23820.1"
                     /translation="KWGWKVGDRVPIASNIFSQRNGSHTWDFDIVGIFTGKIPQVDTN
                     FMFFQYNYFDETRSFGKDTIGWLVLQTTNPAENDSVAKAIDATFVNSTAETATDTEKA
                     FNKAFAAQFGNIALIVVLVVGAAFVTILMIVGNTMALTIRERTREIGVLKTLGFTGGR
                     ILRLVLGESVLLALLGGLPGLALAVLATIWLRPSVSNLLPSFALTGDIVAEAIGLMLA
                     LGLVTGLIPALNAMRLQIATALGRG"
BASE COUNT         1382 a         2073 c         2107 g         1263 t
ORIGIN      
        1 ccggcgtcag gcgccatcgt tcgccgcagc acttggaatt tatcggttaa gccaactccg
       61 cccgaagcca agcaacccct gcggcatgaa gatgaccatc gcgataaaga tgatccccac
      121 cggaatgagg taatactcgg tgaaaaagcg cgagaaggcc tcgcgcagca gcaggaaaaa
      181 gccggcaccg acaatgggcc ctaccaatgt gccgacgccg cccatgacgt tgaagatcac
      241 cgtctcaccg gaaaccagga agtagacgaa gtcgggcgcg gcgaagcggt tctgaatggc
      301 gtacagcaca cccgccagcc cggcaaatat tcctgacagc atgactgcga ccatcttgta
      361 gcgctcaacc ggatagccga tcgcacgggt gcggctctcg ttctcccgta tcgattgcag
      421 caccatccca aaaggggact gggtgatgcg ccgcagaatg agataggatg ccgtcaccac
      481 cgcgagcacg aaccagtgca gtgtctcgtt cgtgaacggg gtcgcgtaaa tccatggaat
      541 tgacaatgcc ggacgcctga acgtcagccc gttttcgcct cccgtcacct cggtccaggt
      601 gaagatgatg acgtagaaga tttgcgagaa gattagggtc gtgatggcga aatagatgtc
      661 gcgcaggcgc gttgagaaat aagccacgaa aagggcagcg cccgctgccc cgatgagccc
      721 cgagccgatc gccagccaaa gatttggtgg attgaccgtc agtagcgccg ccgctgcgcc
      781 atacataccc agaccgaaga atgccgagtg gccgaaggaa atcatgccgg tgtaaccgat
      841 caggatgtca gacgacatgg ccagcaggcc ccagatgagg atctccgtca ggaagcgtcg
      901 ccagaattcc ggcagcacca gcggcgctgt tgccagcagc accaaaatga cgccgaatcc
      961 gatccagtag ctcttgcgtg gtcgtttttt cattttgggg tcggaacaaa aaggccggtc
     1021 ggccggatca acagcgtcaa gatcaggacc acgaacgaaa caatcactgc ctgggctggg
     1081 ctgacccaga tcgaggcgta ggattcaaga aggctgataa agatcgccgc ggcaatcgag
     1141 ccgccgaggt ttcccatgcc gccgatcacg accacgatga aggccttcaa aacccaatca
     1201 agtcccatgg cgtggttgac gccgaccagc gggccgaaca ggacaccgct ggcggccgcc
     1261 atgccggcac cgatggcgaa aaccgctgtg tggacccacg gaaccgggat tcccatggcc
     1321 tgcgccatga cgcggtcctg tgtggtggcg cgaatccaga ttccccaggt gccatatttg
     1381 agaaacagcc acagggcgcc gatgataacg gccgatagcc cggcgatcac gagccgatac
     1441 cacggatatt cgaggtagag gagctgaaag ctgccggtga agggctcctg aatcttgcgc
     1501 gccaccggac cgaactgcca aagcgcataa ttctgcagca ccagggagat gccaaaggtg
     1561 gcgaggatgg tcgtcagggg atcgcggccc tgtaacggcc ggagcgttac gatctggagc
     1621 gctgcgccga ggagcgcaac cataagcgag gcgacgagga gtgcgatcca aaagctgccg
     1681 gtcgttgcca gtacgacgac accaaaataa gcgcccagca tgaacagctc gccatgggca
     1741 aaattcacca cgtccatgat gccgaaaatc agcgtcaatc cggaggccac cagcgccagg
     1801 atcataccgg tgacgattcc gttcacggtc tggatcaaaa tctgatccca cggaatggca
     1861 gcgagaactt cgagcgctgc gtccatgact cacaccccaa gatactggtg aatgacggcg
     1921 tcattcactt taatgtcgga cgccgcgcaa tgatgccgga ccacgccctt ctccatgatg
     1981 tagatgcgct ggctcgcttc gagggtgagc ggtacgttct gctccaccag caaaatagcc
     2041 acgccctccc ggtgcaacgc gttgatgatt tggctgatct gcgagaccat gcgcggcatc
     2101 aggccttccg taggctcatc gagcaggatg atcctgggct caagcatcat ggcccgcgcg
     2161 atggcgagca tctgctgctc gccccccgaa agcgtgccgc cgggttggtc gcgtcgctcg
     2221 gcgagcaccg ggaaataggt aaaaacctta tcgagcagct cttgtttcct cacggtagtg
     2281 acaccgttcc gatcgagacc ggtgcgcaga ttctccatga cggtgaggaa gcgaaagatg
     2341 cgccggtcct cggggacata gccaatcccg agccgcgcca gatgatgggc cggcaggccg
     2401 gtgatggagc ggccggtgag cagcacctcg ccttggtgcg ggcgggcaag gcccatgatg
     2461 gtcttgagcg tcgtgctctt gcccacaccg ttgcgcccta acaggccaac gacctccccg
     2521 gcaccgacgt gcagcgtcac accctgcaaa atatggcttt tgccgtagta ggtgtggatg
     2581 ttgttgaccg acacgagggc ctcggtcggt gtgtgcactg cgctcatgtt ttgaggtaga
     2641 cctccagcac cttcggattc tgttggatct ctgccggggt tccctcggcc agcacttcgc
     2701 cgtagtgcag caccgtaatt cgttgcgcca gctccatcac cacttgcatg tcatgctcga
     2761 cgatcaggat cgtgaggttc ttcgcaacgc ggcgtaccaa ctccatcgtg tcatgtgtct
     2821 cagccgcgct cattccggcg gtcggctcgt cgaggcacag gagctcgggt tcggtggcaa
     2881 gcgcaatccc aatctcaaga ttgcgttgct cgccgtgaga aagatttgca gccagctccg
     2941 ccgctttgct gcgaaggccg accgattcca gcactgcctc ggcctttgcg atgatgtcgc
     3001 gatacgcgct gtgatgcgtg aacatgctcc aaccgtgccg ccgcgattgg gcggcgatgc
     3061 gaacgttttc cagggtcgtg gcgtttggca gaatgttggt gatctgatac gagcgcgcga
     3121 tacccttgcg cgaaatgcga tcactggaga gccccgtaat gtcctcgccc ttgaacagga
     3181 tacggccgga cgacgggcgc agaacaccgg tcaggcagtt gaagaaggtg cttttccccg
     3241 ccccgttcgg ccctatgatc gcgcggattt caccgcggcc gacctcgaag ttgacgtgat
     3301 tgagcgcagc taggccgccg aagcggactg tcaacagatc tatccggaga acgggaacag
     3361 ccgcggctcc ccgcccggcg gccggggagc actggttgat cgcggtatcc gcggtcactt
     3421 aagcggaggc gaacttgcag gccggcggga atagcgtctt ctccttctca accgtctcca
     3481 agatccgatg cttgccgccc ttgatctcga agatgaactc gcgcacgaac gcttggtggt
     3541 cctccttacg gagcaccttg tcgccctgcg ggaagtcgtc gccttccttc atctccagac
     3601 cttcgagagc ctcgaccagc ttcatggtgt cctcgcggcc gcggaagccc gatttctcca
     3661 tgccgagctt gagggcattc accgactcgt agttcgactg cacatagcga tcgggcagcg
     3721 gaccagtggg atcgatcttc ttgagccgaa cgcgggcctc ttccaggaat ttcttgtgtg
     3781 ccgccgtgtc gagtggacct tcaagaagcg gaaggtagcg attgatgccg acaaaaccct
     3841 caatcttatt gccgagcgcc ggcagattgg tggattccgc aatggcgcca tctccggccc
     3901 acttgtattt tctggtcaga ccgagatcga acgcctggtt gcccacagcc acgccatcaa
     3961 cgccgacgaa gacgccgaac agcccgtcga agttcccgct gatcttcgac agaaaggggg
     4021 tcatgtcggc ggtgccgagc ggaatgcccg tggcaccgac cacttctccg ccggccttct
     4081 tgatccgatc cgcgtaagca tcacgtgttg attggcccca cgcgtagtcg ctgtacgcga
     4141 tgtgccactt cttgcccatc ttgccgacca gatggggggc gaatgccacc gcctgtgcgg
     4201 gcgcgtaatc gcacgggcgg aagctgtagc ggttgcactt gctcgtggtc agcgtggtgt
     4261 cgaggcacac gctgatcatg ttgacgatct tggcctcctc ccacacgggc atgcaggcga
     4321 ggcatatatt ggagaggaag ccgccgactt gcgcgtcgat cttgtcctcg accaccagct
     4381 tttccgcctt gcggcgagca acatccggct tggactcatc gtccgcgatc acgagctcga
     4441 tcggccggcc gttgatgccg ccggatttgt tgatgcggtc taccgccatc tccacgccga
     4501 ccagcgcggt cttgccgcca gcagccccgg cgcccgaaag cggctgtacg gtgccgatct
     4561 tgtacggctt ggcctggccg aaagcggtcc gccacggcgc aggcaccaat gcggttgcac
     4621 ccagtacgcc ggcaccgtac ccgatcaggc gtcgacgcgt taccttgccg ctgtaccaga
     4681 actcgtttga tctatcttgg tcattccaat caatggccat tgtttctcct ccggactttt
     4741 catccccatt gcggttaggt taccgcaatg gtcccggtgt gcggaagggg tcgcgggggc
     4801 gaacaaggag gggtagaggg ctatccgctc gactgtaggg cgcaacagcg tagacttgcg
     4861 ctgttggttg gtggaatacg ccatctaccc tacgcatact atgcgtacaa ccccgccacg
     4921 atcggcatcc gggctgcgcg cagcgccgga aataacccgc cgaggagacc caccacgagg
     4981 gcgagcacca cgccctcgcc gacgagagct gggctcagtc tgaagttgaa caccacttgg
     5041 gtaaagttgc cgccgagcgt cgaggcgctg atgccgtcaa agatggcgta ggtcaaggct
     5101 gccccgatga caccgccaat ggcggcaagc agcagcgact cgatcaaggt gccgacgaag
     5161 gcggaaaagc cgccaaagcc gatcgctcgc agcgtggcaa tctctgtcgc gcgggccgtc
     5221 accgatgaat acatggtgtt gagcgcgccg gccagcgccc cgaatgccat ggcaatggcc
     5281 agcggccagc cgagcttttg aatgagatcg gtggtttgcg atgactgatc cgcgaaatag
     5341 gcggcttccg atttgacgtc cagcttcatg cgcgggtcgt tgtcgttgta gctcttgagc
     5401 tcgtcgatgc tcgccggcgt cgtgagccgc gcccgcacgg tctgaaagaa attgttgcgg
     5461 ttgaacaggc tctgcaccac cggcaggtcg gcccagattt ccgattcgaa cacgctgccg
     5521 tccgcgtcga aaataccgac cacggtccat cgcgtggtac cgaacgcgac ggtgctgccg
     5581 agatcgaagc cgtcgaattc tcgggccagc cccttgccca ccacgatctc gttgacgccg
     5641 cggttgaaca tgcggccggc cgtgacggtg atccccttgc gcagcgcgaa gccttgctcg
     5701 ccgatgccgc gcagcggcag gttggctttg gtcttggtgg tgtgcttgac gccgtcgact
     5761 acgagataga gctccggcga caccagcggc ttgccgccgc tgccgcgcgc gatgccgggc
     5821 ccatcctcga cgaggcgcac ttgctcgcgt gtcaccgtgc tgttgatttc ggcctgcgac
     5881 ccaccgcgca gcacgatgcc gatgtcttcg gagccggagc ccgcaatggt gcgctggaac
     5941 ccgttggcca tggcgaggaa ggcgagcagc accatgacaa cgagggcgat ggccacgacg
     6001 gtcgacagcg atagcaacac gcgctgggag atgcttttaa ggttgatggt ggtgaccgcg
     6061 acgatttgga gaaggagcga gcgcatggat atcagccccg tccgagcgcg gtcgcgatct
     6121 ggagccgcat ggcgttgagt gccgggatga ggccggtgac gagcccgagc gcgagcatca
     6181 ggccgatcgc ctccgccaca atgtcgcccg tgagcgcaaa gctaggcagt agattggaga
     6241 cgctggggcg cagccatatc gtggccaata cggcgagtgc aaggcccgga agcccgccca
     6301 ggagggcgag caggaccgac tcgccgagaa cgagacgcag aatgcgtccg cccgtgaagc
     6361 ccagcgtctt gagcaccccg atctcgcgtg tgcgctcgcg aatggtcagc gccatggtat
     6421 tgccgacgat catcaggatg gtgacgaagg cagcgccgac cacgagcacg acgatcagcg
     6481 cgatgttgcc gaattgggct gcgaatgcct tgttaaaggc tttctcggtg tcggtcgcgg
     6541 tctccgcggt ggaattgaca aacgtcgcgt cgatcgcctt cgcgacgctg tcgttctcgg
     6601 ccgggttcgt ggtctggagc accagccagc cgatcgtgtc cttgccgaag gagcgggttt
     6661 cgtcgaaata gttgtactga aagaacatga agttggtgtc gacctgcggg atcttgccgg
     6721 tgaagatgcc gacgatgtcg aaatcccagg tgtgggagcc gttgcgctgg gaaaagatat
     6781 tgctggcgat cggcacgcgg tcgccgacct tccatcccca tttgc
//
LOCUS       DATILV010000541         9015 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_898824, whole genome shotgun sequence.
ACCESSION   DATILV010000541 DATILV010000000
VERSION     DATILV010000541.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9015
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_898824"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..335
                     /locus_tag="VLJ17_12430"
     CDS             <1..335
                     /locus_tag="VLJ17_12430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23821.1"
                     /translation="ETTRAVVKALNQGTRDTIAAPQKALDLLKARDPMMKMDIERIRL
                     DLALGLTNTTHVASAGLSSVNPEKLKKTIDSVVVAYGLPRSPDAASVFTDQYLPPVAE
                     RMVPKSTN"
     gene            747..2156
                     /locus_tag="VLJ17_12435"
     CDS             747..2156
                     /locus_tag="VLJ17_12435"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HSV23822.1"
                     /translation="MPANQDLQPAGTHDAVTKGTPGDDTLLGMGAGHNMLYGGAGNDT
                     LIGDGGGYNVLYGGIGNDTLIGQGDGHNQLYGGAGDDTLVGQGAGYNALHGGVGNDTL
                     VGDGGGHNTLYGGVGNDTLIGQGDGHNVLRGGIGDDILVGQGAGYNVLHGGAGNDTLI
                     GDGGGHNELYGGAGNDVLIGQGDGHNTLDGGAGADILVGRGAGYNVLHGGDGNDILVG
                     DGGGHNTLDGGAGDDTVYGQGDGHNTLDGGAGNDTLIGQGAGYNTLNGGAGNDTLIGD
                     GGGHNTLDGGAGDDLLIGQGDGRNTLDGGAGNDTLIGQGAGYNTLNGGAGNNILVGGG
                     GGHNVLNGGAGNDTLIATGGGHNTLNGGGGNDTFILGGAGDNVATGGNGDDLFVYQLG
                     HGSDTIDGGKGKGIDTIQLDHGSTPVHPETDWTTILTSGHIVSQGDGSMTLSHDSSGT
                     LHMADGSMITFANVDHITW"
     gene            complement(2243..3652)
                     /locus_tag="VLJ17_12440"
     CDS             complement(2243..3652)
                     /locus_tag="VLJ17_12440"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HSV23823.1"
                     /translation="MNESASPSPLPFRDRRRPSAPLPLTGRLGPWRYYRALRTNPIKS
                     WRQEAYEAPILVDRGPLSDIIVVNLPDAIRRVFLDNVGNYPKDRLQLEKLEPGLGRGL
                     LTAESEDWKLQRRTLAPLFRPQAVTDYLPDMVGAVREHLARFEVAATEGATIDMAAEM
                     TALTYEIISRTVFSSELQTSAEVMRAAISHYFAVLGRIDLWDFLKVPFWLPRPALWRV
                     RSSTRVFRTEVHRLLKQRRARETTAGAPRDIVTLLIQARDPETGSALSDRIINDNLVT
                     FIGAGHETTANALGWTLFLLSEFPWAYDRLAQEVDAVLNGNAPAIEDIPKLVFTRMVI
                     EEAMRLYPPVPFLSRQAVQPDRLGDVEVRPRSLVVVAPWVVHRHRLLWEKPDLFEPER
                     FAPDRRALVPRFGYLPFGAGPRICIGAGFAMQEAVIALAMIAQRFRFRLTADAEVEPV
                     AWITLRPSKGLPMRLERRA"
     gene            3812..4282
                     /locus_tag="VLJ17_12445"
     CDS             3812..4282
                     /locus_tag="VLJ17_12445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013895064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HSV23824.1"
                     /translation="MAQVNVKVNGRAVSRQVEDRTLLVEFLRETLGLTGTHVGCDTGQ
                     CGACVVHLDDRAIKSCTMMAAQASGAEITTIEGLAKGDVLHPVQAAFHQHHALQCGFC
                     TPGMIMTAVDLLKRIPHPDEATIRANLDGNLCRCTGYHNIVKAIAAAAQSGAGA"
     gene            4297..6663
                     /locus_tag="VLJ17_12450"
     CDS             4297..6663
                     /locus_tag="VLJ17_12450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HSV23825.1"
                     /translation="MAHEGIGARVLRKEDRRFITGQGNYTDDITVKHAAHAEFVRSPH
                     ARARIVRIDTSAALAAPGVIGVLTGTELAEDKVGGLICGWMIHSKDGSPMKAAPYAPL
                     ARDVVRYVGNAVAVVVAETKNEARDAAELVRVEYEVLPSVVDPAKAQAQGAPQIHAEA
                     PGNTIYQWALGDKGAVDRAFADAAHRVDLDLVNNRLVPNAIEPRAATAIYERAEGRFT
                     LYTTSQNPHVTRLVLSAFIGLAPEHKLRVVAPDVGGGFGSKIFIYPEETVCLWAARRL
                     GVPVRWTADRRESFLTDAHGRDHVTHAEMAFDGSHKIVGLRVKTIANLGAYMSTFSSS
                     VPTYLYATLLSGQYDIPAIYAEVDAVYTNTTPVDAYRGAGRPEATYVVERLMDVAAGR
                     LGVDAAEIRRKNFIRNFPHQTPVIMNYDTGDYEASLNVALSAARYAEFPARRNEAKAR
                     GRLRGIGLACYIEACGIAPSQAVGSLGAGVGLWESAEIRVNPVGTIEVLTGCHSHGQG
                     HETTFAQLVAERFGVPMDQVSIVHGDTDKVQFGMGTYGSRSGAVGMSAINKALERVEA
                     KAKRIAAHLMEAAETDVELKGGEFVVVGTDKKIAFANVALAAYTAHNLPAGTEPGLKE
                     SAFYDPQNFTFPAGTYVCEVEVDPKTGGVEIVQFTAADDFGTIVNPMIVEGQVHGGLA
                     QGIGQALLEACRYDSDSGQLVTATFMDYAIPRARDLVSFGVSTTVTPCKTNPLGIKGC
                     GEAGAIGSPAAVINAIANALGVERFDMPASAQRVWEAARAHRAPAAAE"
     gene            6675..7472
                     /locus_tag="VLJ17_12455"
     CDS             6675..7472
                     /locus_tag="VLJ17_12455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009466038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HSV23826.1"
                     /translation="MYQTTYIRAGSLAEAQHLLGDYPDAKLLSGGQTLVPTLRQRLAR
                     PSHLIDISHLGELRGISQQGDQVVIGATATHAEVAASDLVRQKIPGLAGLAGLIGDPP
                     VRHLGTIGGSIANNDPAADYPAAVLALKATVQTSKRTIGADNFFTGLFETALDPGEIV
                     VSVSFPVPRRSAYEKFHQSASRFALVGVFIAVIADGSIRVAVTGAGPCVFRATSIEAA
                     LANNFTADAAESASVNAEGLNSDIHGSAEFRAHLVPVLAGRAVVAAR"
     gene            complement(7604..8788)
                     /locus_tag="VLJ17_12460"
     CDS             complement(7604..8788)
                     /locus_tag="VLJ17_12460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV23827.1"
                     /translation="MCYPIDGLPEAVLRVAASALIGAGVSFSWFVGARAQNEPLVIAK
                     QGYFFVGGTIDTKREGSPTVGHMYVEFQVPQKAAHPYPVVMIHGGSQTGTNFTGTPDG
                     REGWAQYFLRRGYTVYVVDQVARGRAAQWSQANGPVSAANLARLEQRFVAPERFSQWP
                     QAHLHTQWPGTGKPGDPSFDQFYASQFPSLIDFPLQQALNRDAAVALLDRIGPAVLLI
                     HSQSGAFAWPIADKRPSLVKAIVAVEPNGPPAHDVEFKGAPEWFGDNPHLKAYGLVDV
                     PLTYDPPVSDVAPLNFVREDKAEKPDYVRCWAQQEPARKLVNLQNTPILIVTSEASYH
                     APYDHCTVRYLAQAGVKSTFLRLPDVGVHGNGHMMMLEKNSDSIAREMADWLDHALPG
                     RP"
BASE COUNT         1775 a         2793 c         2845 g         1602 t
ORIGIN      
        1 ccgaaaccac ccgcgcagtg gtcaaggcgc tcaaccaagg tactcgggac accatcgcgg
       61 ccccgcaaaa ggcgcttgat ctgctcaagg cgcgcgaccc aatgatgaag atggatatcg
      121 agagaattcg tctcgacctc gcgctcgggc tcaccaatac gacccatgtg gcgagcgcgg
      181 ggctaagttc cgtgaacccg gaaaagctga agaagacaat tgattccgtg gtagtggcct
      241 atgggctgcc ccgcagtccc gatgcggctt cggttttcac ggaccagtac ttgccgccag
      301 tggctgaacg gatggtgccg aagagcacaa attagagcgc ccccgctgac atgcatctag
      361 attgccggct tgatccgcca atccatcgca gtttcgtgac tgaagcgata aagagcatag
      421 cgcagatcgc gtgacgggcc ggcaaatgac cttttgctca ctcggctgct tacggtcgag
      481 agcgagaatg cagacagagt cccccaactc tatcttgatt tatgaatcgt tgctgggatc
      541 cagtgttttc tcgtcgatag agggattaat ttagtagctg tactggagcc gtgcgacgga
      601 acgttatggt cgagccagat ttctaagatc gcacctatca attgttagta agtatccaat
      661 agattttgcc cgaaatattg attttgcaat cgatcggctg agtatgcgcg ccgagcagca
      721 gagaacgtga tcaggagtaa caatacatgc cagccaatca agaccttcag cccgcgggta
      781 cgcacgatgc cgtcaccaaa ggcactcccg gggacgacac cttgttaggc atgggcgctg
      841 gccacaacat gctctacggc ggcgctggca atgatacttt gattggcgat ggcggtggct
      901 acaatgttct ctacggcggc atcggcaacg acaccttgat tggccagggc gacggccaca
      961 accaactcta tggcggcgcc ggcgacgaca ccctggtcgg ccagggcgcc ggctacaacg
     1021 cgctccacgg tggcgtcggc aacgacaccc tggtcggcga cggcggcggc cacaacaccc
     1081 tttacggtgg cgtcggcaac gacaccctga tcggccaggg cgacggccac aacgtcctcc
     1141 gcggtggcat cggcgacgac atcctcgtcg gccagggggc cggctataat gttctccacg
     1201 gcggcgccgg caacgacaca ctgattggcg acggtggcgg ccacaacgaa ctctacggcg
     1261 gagccggcaa cgacgtcctg atcggccagg gcgacggcca caatacgctc gatggcggcg
     1321 ctggggccga catcctggtc ggccgaggtg cgggctacaa tgttctacac ggcggtgacg
     1381 gcaacgacat cctggtcggc gatggcggcg gtcacaacac gctcgacggc ggcgccggcg
     1441 acgataccgt gtacggccaa ggtgacggcc acaacacact cgacggtggc gccggcaatg
     1501 acactctgat cggccagggg gcgggctaca acaccctcaa cggcggtgcc ggtaacgaca
     1561 ccttgatcgg cgacggcggc ggccacaaca cactcgatgg tggcgccggc gacgacctcc
     1621 tgatcggcca gggtgacggc cgcaacacgc tcgacggtgg cgccggcaac gacaccctga
     1681 tcggccaagg tgcgggctac aataccctca acggcggtgc gggcaacaac atcctggtcg
     1741 gtggtggcgg cggtcataat gttctcaatg gcggcgccgg caacgacaca ctgattgcaa
     1801 ccgggggcgg ccacaacacg ctcaatggcg gtggcggcaa cgacaccttc atcctcggcg
     1861 gtgccggcga caacgtcgca actggcggca acggcgatga cctgttcgtt taccagctcg
     1921 gtcacggctc cgatacgatt gacggcggaa agggcaaggg gatcgatacg atccaactcg
     1981 accatggatc aacgccggta cacccggaaa ctgactggac gacgatcctg acgtccgggc
     2041 acatcgtcag ccagggcgat ggcagcatga cgctgtcgca cgactcatcc ggcacgcttc
     2101 acatggccga cgggtcgatg attacgtttg ctaacgtcga ccacatcacg tggtaaccgt
     2161 aggttggcga gaccaatagc accggtctcg ccggcgcggt gctcccacgg cattggcacg
     2221 gacggagaac gtgcagttcg gatcatgcgc gccgttcaag ccgcatcggc agccccttcg
     2281 acggccttag cgtgatccac gctaccggct caacctcggc atcggcggtg agccggaacc
     2341 ggaagcgctg cgcgatcatg gcaagtgcga tcacggcctc ctgcatggca aatccggcgc
     2401 cgatgcagat tcgcgggccg gcgccgaacg gcagatagcc gaaccgcggt accagcgcac
     2461 ggcgatccgg ggcgaagcgt tctggctcga acaaatcggg cttctcccat agcaggcggt
     2521 gccgatgcac cacccaaggg gcgacgacaa cgagcgagcg cggccgaacc tccacgtcgc
     2581 ctaggcgatc cggctggacc gcctgacgac tgaggaacgg caccggcgga tagagccgca
     2641 tcgcttcctc gataaccatc cgggtgaaca cgagcttagg aatgtcctca atggccggag
     2701 cgttgccgtt gagcaccgcg tcgacctcct gggcgaggcg atcatacgcc catgggaact
     2761 cggacagtag gaacagcgtc cagccgagcg cgttggcggt ggtctcgtgg ccggcgccga
     2821 tgaaggtgac gagattgtca ttgatgatcc ggtcgctaag cgcagatccg gtctccggat
     2881 cgcgcgcttg gatcaatagc gtgacaatat cgcgcggcgc tccagcagtg gtctcgcgcg
     2941 cgcggcgctg tttcagcagt cggtgcacct cggtgcggaa gacccgggtc gatgatcgca
     3001 cgcgccacag cgcggggcgc ggcagccaga acggaacctt gaggaaatcc cacaggtcaa
     3061 tccggccaag caccgcaaaa taatggctga tcgcggccct catgacctcg gcgctggttt
     3121 gaagctcgct cgagaacacg gttcgcgaaa tgatctcata cgtcaacgcc gtcatctcgg
     3181 ccgccatgtc gatggttgcg ccttcggttg ccgcgacttc gaatcgcgcc aaatgttcgc
     3241 gaaccgcgcc gaccatgtcc ggcagatagt cggtgactgc ctgcggccgg aaaagcggtg
     3301 ccaatgtccg gcgctgcaat ttccagtcct ccgactcggc cgtgagcagg ccacggccga
     3361 gtcccggttc gagtttttcc agttgcagcc gatccttggg ataattgccg acgttgtcga
     3421 gaaagacgcg acgaatggcg tcgggcaagt tgacaacaat gatgtcgctc agaggcccgc
     3481 gatcaaccag gatcggggcc tcgtaagcct cctggcgcca tgatttgatc ggattggtcc
     3541 gtaatgcgcg gtagtagcgc cacggtccga gcctaccggt gagcggcaac ggtgccgacg
     3601 gacgtcggcg atcacgaaat ggcagtggcg aaggtgaagc gctctcgttc atcacgccct
     3661 cctgcgcacg atatggtgtt aggggcgcgg gactgccgcg ctcacgcggg aacgccatcg
     3721 ccgcaaggta gatacgcctt cctcgccacg ggacttcctt gccaagccat gatcgtccaa
     3781 ggtattcgta tttccaaagg gagggcgcga aatggctcaa gtcaacgtca aagtcaacgg
     3841 acgtgctgtg tcgaggcagg tcgaggatcg aaccctcctg gtcgagttct tgcgcgagac
     3901 gctggggctg accgggacgc atgtcgggtg cgatactgga caatgcgggg cctgcgtcgt
     3961 ccatttggac gaccgcgcca tcaagtcatg caccatgatg gcagcgcagg catccggcgc
     4021 cgagatcaca accatcgagg ggctggccaa gggagacgta cttcatccgg tgcaggcagc
     4081 atttcaccaa catcatgcgt tgcagtgcgg tttctgcacg cccggcatga taatgacggc
     4141 ggtcgacctg cttaagcgca ttccgcaccc ggacgaagct acgattcggg cgaatctcga
     4201 cggcaatctg tgccgctgca cgggatatca caacatcgtc aaggcaattg ccgcggcagc
     4261 ccagagcggc gcgggcgcgt agggggaggg gctcacatgg cacatgaggg catcggggcg
     4321 cgggtcctgc gcaaggaaga tcggcgcttc atcaccggcc aaggcaacta taccgacgat
     4381 attacggtga agcatgccgc gcacgcggag ttcgtccgca gcccgcatgc ccgcgcgcgg
     4441 atcgtccgta tcgacacctc cgcggcgctc gccgcgccgg gtgtcatcgg cgtgctcacc
     4501 ggcacggagc tggcggagga taaagtcggc ggactgattt gtggatggat gatccactcc
     4561 aaggacggct caccgatgaa ggcggcccct tatgcgccgc ttgcccgaga tgtggtgagg
     4621 tacgtcggca atgcggtcgc cgttgtagtg gccgagacca agaatgaggc gcgtgacgcc
     4681 gccgaactgg ttcgggtgga atatgaagtg cttccgtcgg ttgtcgaccc tgccaaagca
     4741 caggcacaag gcgctccgca gatccacgcc gaggccccgg gcaataccat ctatcagtgg
     4801 gctctcggag acaaaggcgc ggtcgaccgg gcgttcgcgg acgccgccca tcgtgtcgat
     4861 ctcgatctcg ttaacaaccg gctggtgccg aatgcgatcg agccgcgcgc cgcgaccgcg
     4921 atctacgaac gcgccgaagg tcgcttcacg ctctacacca cttcacagaa tccccatgtc
     4981 acgcgcctcg ttctgtcggc attcattgga ctcgcgcccg agcataagct gcgcgtcgtg
     5041 gcgcccgatg tgggcggcgg attcgggtcg aaaatcttca tctatcctga ggagaccgtg
     5101 tgcctgtggg cggcccggcg gctcggcgta ccggtaagat ggacggccga ccgcagggag
     5161 agttttctca ccgatgctca cggccgcgac cacgttaccc acgccgagat ggcgtttgac
     5221 ggcagccaca agatcgttgg actgcgggta aagacgatcg ccaatctcgg cgcctacatg
     5281 tcgaccttct cgtcgagcgt gccaacctat ctgtatgcga ccctgctttc gggtcaatat
     5341 gacattccgg cgatctatgc cgaggtcgac gctgtctaca ccaacaccac gccggtcgat
     5401 gcctacagag gcgccgggcg gccggaagca acctacgtgg tggagcgctt gatggacgtt
     5461 gcggcgggcc gtctcggcgt cgatgctgcg gaaatccggc ggaaaaactt catccgcaac
     5521 tttccgcacc agacgccagt gatcatgaac tacgatacgg gcgactacga agcgagcctc
     5581 aatgtcgcgc tcagtgccgc ccgatacgcc gagttcccgg cccgccggaa tgaggcgaag
     5641 gcgcgcggca gattgcgagg tatcggcctc gcctgctaca tcgaggcctg cggtatcgcg
     5701 ccgagccaag cggtcggatc actgggcgcc ggcgtcggct tgtgggagtc cgccgagatt
     5761 cgcgtcaatc cggtcgggac catcgaagtg ctgacgggat gccacagcca tggccaagga
     5821 cacgaaacca ccttcgcgca gcttgtggcc gagcgtttcg gtgtgccgat ggaccaggtc
     5881 agcattgttc acggcgatac cgacaaggta cagttcggga tgggtaccta tggctcgcgc
     5941 tccggtgcag tcggtatgtc ggcgatcaac aaggctctgg agcgggtgga agccaaagcc
     6001 aagcgcatcg ccgcgcatct catggaagct gccgaaaccg acgtcgagct taagggcggc
     6061 gaatttgtcg tggtggggac cgacaagaag attgccttcg ccaacgtggc gctcgccgcc
     6121 tatacggcgc acaacctccc ggccgggacc gagcctggcc tgaaggaaag cgcgttctac
     6181 gacccacaga acttcacttt tccggccggg acctatgttt gcgaggtcga ggtggatccg
     6241 aagacaggtg gcgtcgagat cgtccagttc acagctgcgg acgactttgg gacgatcgtc
     6301 aatccaatga tcgtcgaagg ccaggtgcac ggcggcctcg ctcaggggat cggtcaggct
     6361 ctgctcgagg cgtgcagata cgactcggac agtggccagc tcgtgaccgc gaccttcatg
     6421 gattacgcga tcccgcgggc gcgcgatctc gtgtcgttcg gcgtcagtac gacggtgacg
     6481 ccctgcaaga cgaacccgtt aggcattaaa ggttgcgggg aggcgggtgc gattgggtcg
     6541 cccgcggccg tcatcaacgc catcgccaat gcactcggtg tcgagcggtt cgacatgccg
     6601 gccagcgcgc agcgggtctg ggaagccgcg cgggcgcacc gtgcaccagc ggcagccgaa
     6661 taaggggaag ctcaatgtac cagacgacct atatcagggc cggcagcctc gccgaggctc
     6721 aacacctgct tggtgactat cccgacgcaa agctgctttc cggcggacag acccttgtcc
     6781 cgacgctccg acagcggctg gcacgcccga gccatctgat cgatatctcg catcttggcg
     6841 agctgcgcgg catctcccaa cagggagacc aggtggtgat cggcgcgacc gccacgcacg
     6901 ccgaggtggc cgcgagcgat ctggtccggc agaagatccc cggcctcgcc ggcctcgccg
     6961 gccttatcgg agatccgccg gtgcggcatc tcgggacgat cggcggatcg attgccaaca
     7021 acgatccggc cgctgattat ccagccgccg tgcttgcttt gaaggcaacc gtccagacgt
     7081 cgaagcgcac gatcggagct gacaacttct tcaccggctt gtttgaaacg gccctcgatc
     7141 ctggtgagat cgtggtcagc gtttcgtttc cggtcccgcg gcggtctgct tacgagaaat
     7201 tccaccagag cgcttcgcgc ttcgcgctcg tcggcgtgtt catcgcggtc atcgccgatg
     7261 gttccattcg cgtagccgtc acgggcgccg gcccctgcgt ctttcgggcg acctcaatag
     7321 aggcagcgct cgccaacaac ttcacggccg atgccgccga atctgcctcc gtcaacgccg
     7381 agggtttgaa ttcggatata cacggatcag cggaattccg cgcccatctg gtgcccgttc
     7441 tggcggggcg agcggtcgtg gcagcacgct agttcagcgt ttccgaacgt tgaaccgtat
     7501 cgtacggcgc gccgcgtgaa tgggttgagc gctttaccag acccatcagg agcttttcga
     7561 ttcggcgcgc cctttgatga cgtcgcttca ctcaacatcc ttgctaaggc ctgcccggca
     7621 gggcgtgatc gagccagtcg gccatctccc tggcgatcga gtcgctgttc ttctccagca
     7681 tcatcatgtg gccgttgccg tgaaccccca catctggcag gcgcaggaat gtgctcttca
     7741 ccccggcctg cgctagatag cgcacagtgc aatgatcgta gggagcgtga taggacgcct
     7801 ccgacgtgac gatcaggatc ggcgtgtttt gcaagttaac gagcttacgg gccggctcct
     7861 gctgtgccca gcagcgcacg taatcgggtt tttccgcctt gtcctcgcgc acgaagttga
     7921 gcggcgcgac atcgctcacc ggcggatcgt aggtcagcgg cacgtcaacg agaccgtacg
     7981 ctttcaagtg cggattgtcg ccaaaccatt cgggcgcgcc cttgaactcg acgtcgtggg
     8041 ccggcgggcc gttcggctcg accgcaacga ttgccttgac gagacttggc cgcttgtcgg
     8101 cgatcggcca cgcaaacgcg ccggattggg agtggattag cagcacggcg ggaccgatgc
     8161 ggtcgagcag cgccacggcg gcatcgcgat tgagtgcttg ctgcaacgga aaatcaatca
     8221 gcgagggaaa ctgacttgca tagaactggt cgaagctcgg atcgcccggc ttgccggtgc
     8281 ccggccattg ggtgtgcaga tgcgcctgcg gccattgact gaaccgttcc ggcgcaacga
     8341 agcgctgctc gaggcgcgcc agatttgccg ctgacaccgg cccgttggcc tgtgaccatt
     8401 gcgccgcgcg gccacgcgcc acctgatcaa ccacgtaaac cgtgtaccct cggcgcagga
     8461 aatactgcgc ccagccctcg cgtccatcgg gcgtgccggt gaagttggtg ccggtctggc
     8521 tgccgccatg gatcatcacc accggatacg gatgggccgc cttttgtggc acctggaatt
     8581 ccacatacat gtggccgacc gtcggcgaac cttcgcgttt agtgtcgatg gtgccgccga
     8641 cgaagaaata gccctgcttg gcgatgacca gcggctcgtt ctgggcgcgg gcacctacga
     8701 accatgaaaa cgagacgccc gccccgatca acgcgctcgc agccacgcgc aaaacggctt
     8761 ccggcaaacc atcgattgga tagcacatcg cggctctcct cgtttccgcc ccggtgaatt
     8821 tgttttgtga cgtcgaggct agtcgctggg tttgcggatg tcgaatccga tcggaaatta
     8881 ataggaaagt tgcagatttt tcggccattg ggctattccc gacgtcaatt catgcagcaa
     8941 ttccacagcg ttgcaccaac gagcccgacg cgtcggcatc caccgacaag gcgcaagcac
     9001 tgcaacaaca gctcg
//
LOCUS       DATILV010000542        15912 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4472246, whole genome shotgun sequence.
ACCESSION   DATILV010000542 DATILV010000000
VERSION     DATILV010000542.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 15912)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15912)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15912
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4472246"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..432
                     /locus_tag="VLJ17_12465"
     CDS             <1..432
                     /locus_tag="VLJ17_12465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CtpF protein"
                     /protein_id="HSV23828.1"
                     /translation="VPHQWSAWTRRALIGADDILVVAAPDLANLRNTKSMIDLLKGAR
                     QNDRRPLYALNMVGVPKRPEIKSGDFAKAIEDEPIAVIPFDPQMFGTAANNGQMISEL
                     ASGHRISEMFRSMAHCLTGRAETKSSRTGILPPVFAKLFAR"
     gene            445..1974
                     /locus_tag="VLJ17_12470"
     CDS             445..1974
                     /locus_tag="VLJ17_12470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CpaF family protein"
                     /protein_id="HSV23829.1"
                     /translation="MFGKRSGSPNDGRGMPPPGPAPGLVPGQAPAAPLPLAPAPAPAM
                     APVHGDSSHSAEPRGAPVNVPTDSSLDSRHSETFYEVKSSIFTALIEAIDLSQLSKLD
                     SDSAREEIRDIVNEIIAIKSIVMSISEQEELLDDICNDVLGYGPLEPVLARDDVADIM
                     VNGATTVYVEISGKIQRTGIRFRDNQQLLNICQRIVSQVGRRVDESSPICDARLADGS
                     RVNVIAPPLSIDGPTLTIRKFKKDKLTLEQLTRFGSISKEGAEILKIIGRCRINTIVS
                     GGTGSGKTTLLNCLTRFIDADERVITCEDAAELQLQQPHVVRLETRPPNLEGSGEITM
                     RELVKNCLRMRPERIIVGEVRGPEAFDLLQAMNTGHDGSMGTLHANNPREALSRLESM
                     ITMGGFTLPSRTIREMICASVDVVVQAARLRDGSRRITHITEVLGLEGDVIITQDLFL
                     YDLLGEDANGKLIGRHRSTGIGRPRFWDRARYYNEEKRLAAALDAAAEAAKIDVGRRT
                     E"
     gene            1977..2954
                     /locus_tag="VLJ17_12475"
     CDS             1977..2954
                     /locus_tag="VLJ17_12475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018646590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HSV23830.1"
                     /translation="MDVQLLSIVLLATFCAGAIAWVLIYPYLSGENEAEKRMQSVARA
                     GAPGVKSASRAVKSRREQVESSLKEIENRNKQKKSPPLSTRLAQAGVVWTKQHFVIGS
                     AILGFVVAAIVFILDVGPFAALAAGFAAGVGLPRWTLSYLKRRRERLFIERFPDAIDV
                     VVRGIKSGLPLGDSLRIISTESPEPIRSEFRHILETQAIGVPLGEACGKLFDRMPLAE
                     ANFFAIVIAIQQRSGGNLSEALGNLSKVLRERKKMKGKIKAMSTEATASAAIIGALPI
                     AVMAVVYLTSPDYITLLWTNRMGQMMLAGSAVWMSIGIFVMKKMINFDF"
     gene            2962..3939
                     /locus_tag="VLJ17_12480"
     CDS             2962..3939
                     /locus_tag="VLJ17_12480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HSV23831.1"
                     /translation="MIELLFALFDDKRILAMICAAIAAGATVITLAMPLLGGNELEKR
                     MAAVAAEREKIRQRERERLARGDKTTRRASPKQYMQTVVEKFNLSNLLGEETMRSLLV
                     QAGYRGEGPYVVFLFFRMVAPLSMLASSAFYVFVLLKLDYPWTVNLGICLAATYLGMY
                     LPNLFVKNKITRRQASINRGFPDSLDLMLICVESGMSLESTFQRVSQEIGTQSIELAE
                     ELTLATAELSYLPDRRLTFENLAKRVPLDGVKSLCLALQQSEKFGTPLAQTLRVIAQE
                     NRDQRMTAAEKKAAALPPQLTVPMILFFLPVLFVVILGPAVIKVMETWK"
     gene            complement(3949..4629)
                     /locus_tag="VLJ17_12485"
     CDS             complement(3949..4629)
                     /locus_tag="VLJ17_12485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007599765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV23832.1"
                     /translation="MPTSAKTDVDWHREAESLGARYRADPGDPDTALAYAQALRASGQ
                     RSQAVSVLEQASLRQPHNTVLLGAYGKALAEVGNLEQALEVLNRAHAPDQPDWRILSA
                     QGAVLDQLGQHKEAQGYYASALKVKPEEPSVLSNLGLSYALTKDLKQAEATLRHAVTL
                     SGADARVRQNLALVVGLQGRFSEAETIARADLPSEEAAANVAYLRQMLAQQDDLKNIG
                     RPPPARRT"
     gene            4972..6348
                     /locus_tag="VLJ17_12490"
     CDS             4972..6348
                     /locus_tag="VLJ17_12490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase family protein"
                     /protein_id="HSV23833.1"
                     /translation="MHPAFLIPGSVATVPIWFVNTSSWHDVRVGLDRTACAFAEASGF
                     EPTVGRHAFLPGPDGTLAGVLFGQEDDAKPKDPFLAGKLATTLPRGAYRFANMPHDAR
                     LAALGFAFGGYRFTRYGKSRPDLRLEAPGSTDIVELSRIVEAVYLARDLINTPANDMG
                     PSELAAAATTLAAHHGAEVRTIVDEDLLGQNFPLIHAVGRAAARAPRLIDLSWGDPGA
                     PKVTLVGKGVCFDSGGLDVKSDTAMLLMKKDMGGAASVLALAHMIMDRSLNLRLRVLI
                     PAVENSISGAAFRPLDVYQSRKGLCVEVGNTDAEGRLILADALALADEEAPELLVCMG
                     TLTGAARVALGPDVPPFYTGDDALAADVARHGRAENDPLWRLPLWQPYDQMLDSKVAD
                     LNNIATGGFAGSIICALFLNRFVTAAKAWLHFDIYAWTPAAKSGRPEGGECQAARALY
                     ALLAERYG"
     gene            6367..7224
                     /locus_tag="VLJ17_12495"
     CDS             6367..7224
                     /locus_tag="VLJ17_12495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NlpC/P60 family protein"
                     /protein_id="HSV23834.1"
                     /translation="MTFDPRTTPARPDLAAQHLNGQVVAARFAEGTVLEVRDAQAPVR
                     REPAPDALLDTEALHGERVTVYDQNGEGWYWGQLSSDGYVGWMPANALCPPGPPPTHR
                     VTVLRTFVFPGRSIKAPPIDPLSLGSRVAVKAQQRDLSDGLTDLASGFCIPTRHLAPL
                     ETREPDFVAVAERFVGVPYLWGGKTSLGLDCSGLVQIALTASGVACPRDSDMQERALG
                     APLPTDDLGNLRRGDLVFWEGHVAIVRDQQSIVHANVFHMAVAFEPIEEALHRIAQAG
                     GGVTSIKRL"
     gene            complement(7281..8027)
                     /locus_tag="VLJ17_12500"
     CDS             complement(7281..8027)
                     /locus_tag="VLJ17_12500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HSV23835.1"
                     /translation="MAGHSQFKNIMHRKGRQDAVKSKLFSKLAREITVAAKLGMPDPA
                     MNPRLRAAIIAARAENMSKDSIDRAIKKAQGGDAEAYDEIRYEGYGPGGIAVIVEVLT
                     DNRNRTASDVRSYFTKTGGHLAETGAVSFMFDHVGVVEFDAKVASADAMLEAAVDAGA
                     EDVVSNETGHEVYAGQQSFANIAKALEAKFGEPRKAGLVWKPQNTVAIDDEKGEKLLK
                     LMEMLNEHDDVQNVYANFEVSDALMAKMSA"
     gene            8268..9155
                     /locus_tag="VLJ17_12505"
     CDS             8268..9155
                     /locus_tag="VLJ17_12505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012497625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HSV23836.1"
                     /translation="MPMSAAATIRAIYRYPVKGLSAERLVASALKPGETLAGDRRYAI
                     ENGASGFNPAAPAYLPKQRFLMLMKNERLARLNTHFHDATQVLVIEEGGRELIRGDLG
                     TPAGSAAIEGFFASFCAGELRGPPKILAAPGHSFSDVAKKVVSLINLASVAAIEDMIG
                     RPVDPLRFRGNLYVEGWPAWREFDLLGREIAIGAQARAKVVKRIVRCAATNVEPVTGI
                     RDLDIPSTLLRHLDHADCGVYAEVTTGGDIATGDAVALSPPVFGEGREGESSTELVES
                     CPSLSKTGWDQQTSGAAGR"
     gene            9158..10255
                     /locus_tag="VLJ17_12510"
     CDS             9158..10255
                     /locus_tag="VLJ17_12510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009762990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSV23837.1"
                     /translation="MQVLVVGAGIIGLAIAREAAHAGHDVIVAEAEPHIGSGISSRNS
                     EVIHAGIYYPTGSLRERHCARSRRMLYEFCASHGVPHRKLGKLVVVGRDTDIPMLEKL
                     FAQATRNGVEGLRMLDGPEAIRMEPALACAAAFHSPETGIIDSHRYMLALQGDMEDAG
                     GVVALNTPVKRLVLTPAGWEVRFGGSEPGSLTVDAVVNSAGHGAQELARATEGYPADR
                     VPRLVLAKGNYFSYTGRAAFKRLIYPAPVPGGLGIHVTLDLAGRMRFGPDVQWIDDYD
                     FNVDPGRVATFYPAIRTYWPDLPDGTLVPDYAGIRPKLTAQGEPAADFRIDGPAEHGL
                     PRIVHLFGIESPGLTASLSIAVEVVAKLAEC"
     gene            10316..10834
                     /locus_tag="VLJ17_12515"
     CDS             10316..10834
                     /locus_tag="VLJ17_12515"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HSV23838.1"
                     /translation="MPIHRFHNPPAIGKPSGYTHVVEAASPGRIVYIAGQLGLDRDNK
                     IVGAAGDFRAQAEQTFVNLKNALAAAGIGFEHVVKLNNYLIDIAHLGIFREVRDRYID
                     TSAPPASTTIAISNLARLGALIEVEAVAVVPDKARVSAARSKAAPVKTTRGGTRPVKA
                     AAKPKARSQKHK"
     gene            complement(10806..12233)
                     /locus_tag="VLJ17_12520"
     CDS             complement(10806..12233)
                     /locus_tag="VLJ17_12520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HSV23839.1"
                     /translation="MPSKISCGALVVGIVALGAPATAKAADLDNLMLSWPWALPFVGL
                     LSSIAFGPLLAPKFWHAHYGKVSFMWSALTVTPLAALHGTTTAIAVLVHAVLGEYLSF
                     IVLLMALYVVGGGILLTGSLRGTPFVNTAILAFGTAIASVVGTTGAAMILIRPLLRAN
                     SARLHNVHVVVFFIFLVANIGGALSPLGDPPLFVGFLHGIDFFWTTTYLWKPTALSAA
                     LVLLIFIAVDMWLYRQDRRVAVVGETPSSQPIRVRGLVNLPLIGLIIGAILLSALWKS
                     GITFDVYGTILELQDIVRDIALMCLIVASLILTPEEHRERNGFTWEPIWEVAKLFAGI
                     FICITPVLATLRAGNAGPFSWLLTLMTGGAGEPRNLVYFWLTGFLSAFLDNAPTYLVF
                     FELAGGDAVRLMGELAATLAAISMGVVYMGALTYIGNAPNFMIYAIATERGVRMPSFF
                     GFMIWSSAVLLPVFAILTYVFVIVP"
     gene            12418..13491
                     /locus_tag="VLJ17_12525"
     CDS             12418..13491
                     /locus_tag="VLJ17_12525"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSV23840.1"
                     /translation="MRILHAIISPGFYGSERYCIDLAVAQSRAGHDVTVLVADAGSWQ
                     IRRAIAQADDDGAHSNIVRLIALPGYVPSWLHRPAAAVVLWLRRPNIVHTHLNPAARR
                     IGAIAQRLGIPHVLTLHLDYDANEHASIDGLVALNGRQREQIPPDFAGAVTIIWNWLP
                     SRVESSLARVRPVDVRRLRGGWDADDTTVVFGSVGRLMPEKGMDVLIRAFRLAFAAGN
                     PNVRLVIVGDGPQRSELVQLAGSDRRIVLAGVQSEIAPFYRAFDVFVSAARFEPFGLA
                     IIEAMAAGCPLIATRIHGTVEFVTDPRTLWTEPDSDSQLGLQLRKAAMLNRERFVYDM
                     SRLTLARAVNQMDDFYSRLIGTR"
     gene            complement(13464..15197)
                     /locus_tag="VLJ17_12530"
     CDS             complement(13464..15197)
                     /locus_tag="VLJ17_12530"
                     /inference="COORDINATES: protein motif:HMM:NF014589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase C-terminal
                     domain-containing protein"
                     /protein_id="HSV23841.1"
                     /translation="MYLLGIHNGVHDASACLFRDYKLLAAVSQERLTRRKNDGVVVAE
                     ELPQRAIDECLAIAGILRRDVDVVCSTRSQFEMQSFRLQGRMWARQLYARLTDNRRLY
                     QMTYMMRKQSTKKALEVFDAPSFRERHGFRRAALYFCNHHAAHGVPAYFFSEFDDALI
                     YTADGFGDDVAYSARTGRQGDIALVFGGDENLNLPMKVNSVGLLYNFFTEALGFIPNR
                     HEGKLTGLSAFGLPKAGEELIAHFSVDDRGEATSDYPNYSAMRDHAFDICKRLSREDA
                     AASVQVVTEHVICRAVEALIRNSSLTSLALGGGVFSNVRLNRAVLETTSAKNVFIFPA
                     MGDEGLPVGACLLYLRERDGARTWLANRYLLSELYLGANHDVRFPAAASQHPEIVADR
                     EAPVEKAVDALTGGKAVAIYTDRMEFGPRALGARSILASPVQREVNDSINKRLNRSEF
                     MPFAPVVLADHVATVFDIHAGNAHAARFMTITCDVRPEWRDRIPAVVHVDGSARPQII
                     EATENPLYFQVLELFYKRTGLPVLVNTSFNVHEEPIIDTPEQALTALIDDRIDCILTK
                     DALYRVPIRRL"
     gene            complement(15303..>15912)
                     /locus_tag="VLJ17_12535"
     CDS             complement(15303..>15912)
                     /locus_tag="VLJ17_12535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012497842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA polymerase"
                     /protein_id="HSV23842.1"
                     /translation="TDIHALTASEMFGVPVKGMPGEVRRRAKAINFGIIYGISAFGLA
                     NQLGIPRDEAAAYIKKYFERFPGIRAYMDSTKEECRKNGYVTTLFGRKCHYPDIRASN
                     PSIRAFNERAAINARLQGSAADIIRRAMIRMDDALAIQHLSAQMLLQVHDELIFEVPE
                     EEITRTLPVVKRVMEEAPLPAVALSVPLQVDARAADNWDEAH"
BASE COUNT         3049 a         4773 c         4965 g         3125 t
ORIGIN      
        1 gttccgcatc aatggagcgc atggacgcgt agagctctga tcggcgccga tgacattttg
       61 gtggtagcgg cgcccgatct cgccaatcta cgtaatacca agagcatgat cgatttgctc
      121 aagggcgctc gccaaaatga tcggcgccca ctttacgccc ttaacatggt cggcgttccc
      181 aaacggcccg agattaagtc gggcgacttc gccaaggcga tcgaggatga gccgatcgcg
      241 gtaattccgt tcgatccaca aatgttcgga accgccgcca ataatggcca gatgatttct
      301 gagctcgcct ccggccatcg gatttccgag atgttccgtt cgatggcgca ttgcctgacc
      361 ggccgtgcgg aaaccaaatc gtcacggacc ggaattttac ccccggtgtt tgccaaattg
      421 ttcgcacggt aatcggaggg aaatttgttc ggaaagcgct ccggttcccc gaatgacggc
      481 cgcggcatgc cgccgccggg gccggcgcct ggcctcgtgc caggacaagc ccctgcggcc
      541 ccgctcccgt tggcgcccgc gcccgccccc gcgatggcac cggtgcatgg cgattcgtcg
      601 cactctgccg agccccgtgg ggcaccggtg aacgtgccaa ccgattcgag tctggattcg
      661 cgtcattcgg aaaccttcta cgaggtcaag tccagcatct tcacggcgct gatcgaggcc
      721 atcgatcttt cacaactttc gaagctggat tccgattctg cgcgagaaga aatccgcgat
      781 attgtcaacg aaatcatcgc aatcaagagc atcgtgatgt cgatctcgga gcaggaggaa
      841 ctgctcgacg acatctgcaa cgatgtgctt ggctacggtc cgctggagcc cgtgctggcg
      901 cgcgacgacg tcgccgacat catggtgaat ggcgcgacca ccgtctacgt ggaaatcagc
      961 gggaaaatcc agcgcaccgg aatccggttc cgggacaacc agcaacttct caacatctgc
     1021 cagcgcatcg tcagtcaagt cggccgacgc gtcgacgaat catcgccgat ctgcgacgcc
     1081 cgcctcgcag acggctcgcg cgtcaatgtc attgcgccgc cgctttcgat cgacggcccc
     1141 accctcacca tccgtaaatt caaaaaggac aagctcaccc tcgagcagct tacccgtttt
     1201 ggatcgattt cgaaggaagg cgccgaaatc ctcaagatta tcggccgctg tcgaataaat
     1261 accatcgtgt ccggcggtac cggctccggc aagacgacgc tgctgaattg cctgacccgc
     1321 tttatagacg ccgacgagcg cgtcatcacc tgcgaggatg ccgccgaatt gcagctccag
     1381 cagcctcacg tggtgcgcct tgaaacgcgt ccgccgaatc tcgaaggaag cggcgaaatc
     1441 accatgcggg agctcgtcaa aaactgcctg cgcatgcgcc cggagcgcat catcgtcggc
     1501 gaggttcgcg gcccagaggc gttcgatctc ctgcaggcca tgaacacagg ccatgacggt
     1561 tcgatgggca cgctgcacgc gaacaatccg cgcgaggctt tatcgcgtct tgagtcaatg
     1621 attaccatgg gcggattcac gctgccgtcg cgcaccatcc gggaaatgat ctgtgcctcc
     1681 gtggacgtcg tggtgcaggc ggcgaggctc cgcgacggca gtcgacgcat tacccatatc
     1741 accgaggttc tcggcctcga aggcgacgtg atcatcacgc aggatctgtt cctctatgac
     1801 ctgttgggtg aggacgccaa cggtaagttg atcggacgcc atcgctccac cggcatcgga
     1861 cggccgcgct tctgggatcg ggctcgctac tacaatgaag aaaaacgact tgccgccgcc
     1921 ctcgatgcag ccgccgaagc cgccaaaatt gacgtaggtc gaaggacgga gtgaccgtgg
     1981 acgtgcaact gctctcgatc gtcctgttgg cgacgttctg tgccggcgcg atcgcatggg
     2041 tcctgatcta cccctacctt tccggcgaga acgaagccga gaagcggatg cagagcgtcg
     2101 cgcgggccgg cgcgccgggg gtcaaatccg catcgcgtgc cgtaaagtct cgacgcgagc
     2161 aggtagaaag cagcctgaag gagatcgaga accggaacaa gcagaagaag tcaccgccgc
     2221 tctccacgcg tctcgcccag gcaggtgtcg tctggaccaa gcagcacttt gtgatcggga
     2281 gcgcgatcct cgggttcgtc gttgccgcga tcgtatttat cctggacgtc ggtccgtttg
     2341 ctgcgctggc ggcgggcttt gctgccggcg tcggcctgcc gcgatggacg ttgtcgtatc
     2401 tcaagcgccg ccgcgagcgg cttttcatcg aacggtttcc cgacgcgatc gacgtcgtag
     2461 tccgtggcat caaatccggg ctgccgcttg gcgactcctt gcggataatt tcaaccgagt
     2521 ctcccgagcc gatccggtcc gaattccggc acatcttgga gacccaggcc atcggcgtgc
     2581 cgcttggcga ggcctgcggc aagctgttcg accgcatgcc cctggcggag gcgaatttct
     2641 tcgcgatcgt aatcgcgatt caacagagga gtggcggcaa tctttcggaa gcgctcggta
     2701 atctttcgaa ggtgttgcgc gagcgcaaga agatgaaggg aaaaatcaag gcgatgtcga
     2761 ccgaggcgac cgcctccgcg gctatcatcg gcgcgctgcc gattgccgtc atggcggtcg
     2821 tgtatctgac cagtccggat tacatcacgc tgctgtggac caaccggatg gggcagatga
     2881 tgctggcagg gtcggccgta tggatgtcga tcggcatttt cgtcatgaaa aaaatgatca
     2941 atttcgactt ttgagcatcg catgatcgag cttctgttcg ctcttttcga cgacaagcgc
     3001 atcctcgcaa tgatctgcgc cgcgatagca gccggcgcaa ctgtgatcac gctcgcgatg
     3061 ccgttgctgg gcggcaatga attggagaag cgcatggccg cggtggcggc cgaacgcgaa
     3121 aaaatccggc agcgcgaacg cgagcggctt gcgcgcggcg acaagacgac ccgtcgtgct
     3181 tcgcccaagc aatacatgca gaccgtggtg gagaaattca atctttccaa tttgctggga
     3241 gaggagacga tgcgctccct cttggttcag gcaggctacc gcggcgaagg cccctatgtg
     3301 gtattcctgt tctttcgcat ggttgcgccg ctctctatgt tagccagctc ggctttctat
     3361 gtgttcgttt tgctgaaact cgattatccc tggaccgtga acttaggcat ctgcctcgct
     3421 gccacctacc ttggcatgta ccttcccaac cttttcgtca aaaacaagat cacgcgccgg
     3481 caggcctcga tcaaccgggg atttccggat tcgcttgatc tcatgttgat ttgcgttgag
     3541 tccggcatgt cactcgaaag cacgtttcag cgcgtcagcc aagagatcgg cacgcaatcg
     3601 atcgagctcg cggaggagct gacgctcgcc acggcagaac tgtcctatct gccggaccgt
     3661 cgcctaactt tcgagaatct cgctaaacgc gtgccgctag atggcgtaaa gtcgttgtgc
     3721 cttgctctgc agcagagcga gaaatttggc acgccgttgg cgcaaacatt acgggtgatc
     3781 gcccaggaaa atcgcgatca gcgcatgacg gccgcggaaa agaaggccgc agcgctaccg
     3841 ccgcaactga ccgtcccgat gatcctgttc ttcttgccgg tgttgttcgt ggtgatcctc
     3901 gggcctgcgg tcatcaaggt catggagacg tggaagtagt gacgcctctc acgtccggcg
     3961 cgccgggggc ggccgtccga tattcttcaa atcgtcctgc tgcgccagca tttgccgcag
     4021 ataggcgacg ttggcggccg cttcctctga cggaagatcg gcgcgggcga tggtttcggc
     4081 ctcgctaaat cggccctgca agccgaccac gagcgcgaga ttttgcctca cacgtgcgtc
     4141 ggcgcccgac agcgtcacgg cgtgccgcag cgtcgcctcg gcttgcttga gatccttggt
     4201 aagcgcgtag gagagcccga gattggacag aaccgatggt tcctcaggct tgaccttcag
     4261 ggcgctggcg taatagccct gcgcttcctt gtgctggccg agttgatcga gcacggctcc
     4321 ttgcgccgaa agaatccgcc aatcgggctg gtcgggcgcg tgggcgcgat tgagcacctc
     4381 taacgcctgc tccagattgc caacctccgc gagcgccttg ccataggcgc caagcaaaac
     4441 ggtgttgtgc ggttggcgca gggatgcctg ctccagcacc gacacggctt gggaacgttg
     4501 gccactggca cgcagcgcct gcgcataggc gagggcggta tcggggtcac caggatcggc
     4561 ccgatacctg gctcccaggc tttcggcttc gcgatgccaa tcgacatcag tctttgcgga
     4621 cgtcggcata gaacttggac cgacttggct cagggaactc aaaacggaaa tgttctggca
     4681 gcctgccgcc atgatggcga gtgcgccgag ggcggcgatc gatctggatc gcgaaaggag
     4741 gcggcggttc ggtggggcga tcgcgggact cgaccaggtc acgtgttgga attcccaagt
     4801 tcgagattat gtcgcggcaa taaactgtta accttaactg ttggttaatt cgcgcgacgg
     4861 tgcggatccg ggatcgtcta ccgctgtggc ggcaattgcg gcggaattat ctttcttcaa
     4921 ctccgcggag cggcgtggta gcaggagcag cgtcatttgc ggaccccgtt tatgcatccc
     4981 gcgtttctga taccaggtag tgttgccacg gttccgattt ggttcgtcaa tacctcaagc
     5041 tggcacgacg tccgtgtcgg gcttgatcgt actgcctgtg cgtttgccga ggcgtcgggt
     5101 tttgagccga cggtcggtcg ccacgccttt ttaccggggc cggacggaac actggctggc
     5161 gttctgttcg ggcaggagga cgacgccaag ccgaaggacc cattccttgc tggcaaactc
     5221 gctacgacgt tgccccgtgg cgcctatcgg tttgccaaca tgccccatga tgcgcggctc
     5281 gccgctctgg ggttcgcgtt cgggggctac cggttcaccc gctatggaaa atctcgccct
     5341 gatctgcgtc tggaggcgcc tgggtcgacg gatatcgtcg agctgtcgcg catcgtcgag
     5401 gcggtctacc tggcgcgcga ccttatcaat acgccggcaa acgacatggg gccgagcgag
     5461 ctggcggctg cggcgacgac gctcgcagcg catcacgggg ctgaggtacg caccatcgta
     5521 gacgaggact tgctcgggca aaattttccg ttaatccacg cggtcggccg tgccgccgct
     5581 cgggcgccgc gtctgatcga cctgagctgg ggcgatcccg gcgcccccaa ggtcaccctg
     5641 gtcggcaagg gcgtgtgctt cgacagcggc gggctcgacg tcaaatccga cactgccatg
     5701 ctgttgatga aaaaagacat gggcggtgcc gcgagcgtcc tggcgctcgc ccatatgatc
     5761 atggaccgaa gcctgaattt gcggcttcgc gtgctaatcc cagcggtcga gaattcgatc
     5821 tcaggcgcgg cgtttcgacc gctggacgtc tatcagtctc gcaaggggtt gtgtgtcgag
     5881 gtcggcaata cggatgccga aggacgtctt atcttggcgg acgcgctagc attagcagac
     5941 gaggaggcgc cggagcttct cgtctgcatg ggcacgctga cgggtgccgc ccgcgtcgca
     6001 ctcggtcccg acgttccgcc gttctatacc ggcgatgatg cgcttgcggc tgacgtggcg
     6061 cgccacgggc gtgccgagaa cgatccccta tggcgcttgc cgttgtggca gccctacgac
     6121 cagatgctgg attccaaagt ggccgacttg aacaatatcg ccacgggtgg ctttgcgggt
     6181 tcgatcatct gtgcgctctt tctcaaccgt ttcgtgacgg ccgccaaggc gtggctgcat
     6241 ttcgacatct atgcctggac gccggcggcg aaatccggcc gtccggaggg tggcgaatgc
     6301 caggcggccc gcgcgctcta cgcgcttctc gccgagcgct acggttgatg gcgtgaagac
     6361 cggcaaatga cgttcgaccc gcgcaccaca ccggcccggc cggacctcgc ggcacagcac
     6421 ctcaatggtc aagttgtggc tgcgaggttt gccgaaggca ccgtgctcga agttcgcgat
     6481 gcccaggcgc cggtacggcg ggagcccgca ccggatgctc tgctcgatac cgaagccctt
     6541 cacggagagc gggtgacggt ctacgaccag aatggcgagg gttggtattg gggacagctc
     6601 agttctgacg gatatgtggg ctggatgccg gcgaatgcgc tttgcccacc cggaccgccg
     6661 ccgactcatc gggtaacggt gctgcgcacg ttcgtatttc cgggccgttc catcaaggcg
     6721 ccgccgatcg accctctgtc gcttggcagc cgcgtcgccg tgaaagcgca acagcgcgat
     6781 ctttccgacg ggttgactga cctcgcgtcc ggcttctgca taccgactag gcaccttgcg
     6841 cccctcgaaa ccagggagcc cgatttcgtc gccgtcgcag aacgtttcgt cggcgttcct
     6901 tatctgtggg gcggcaagac gagccttggg cttgattgct caggactcgt gcaaatcgcc
     6961 ctcaccgcaa gcggtgtcgc ctgcccgcgt gacagcgaca tgcaggagcg cgcgcttggc
     7021 gccccgttac cgaccgacga tctgggaaac ctgcgacggg gggacctggt gttctgggag
     7081 ggccacgtgg cgattgtgcg cgaccaacaa tcgatcgtgc acgccaatgt gtttcacatg
     7141 gccgttgcat tcgagccgat cgaagaagcg ctgcaccgca ttgcgcaagc gggcggcggt
     7201 gtcactagca tcaagcgact ttaagtgatc ggcgctatct tggtggaacg aactagcgtt
     7261 caatctcatt gagacacgct ctacgcactc atcttcgcca tcagagcatc ggatacttcg
     7321 aaattcgcgt agacgttctg tacgtcatca tgttcgttga gcatttccat cagcttgagc
     7381 agcttttcgc ccttctcatc gtcgattgcg acagtgttct gcggcttcca caccaggccg
     7441 gccttgcgcg gctcgccgaa cttcgcttcc agcgccttgg cgatgttcgc aaacgattgc
     7501 tgtccggcat agacctcgtg accggtctcg ttcgacacga cgtcctcggc gcccgcgtca
     7561 acggcggctt ccagcatggc gtcggccgag gccactttgg catcgaactc gaccacaccc
     7621 acgtggtcga acatgaacga tacggctcca gtttcggcaa gatggccgcc ggttttggtg
     7681 aagtaggaac gcacatcgga agccgtgcgg ttgcggttgt ctgtcaggac ctcgacgatc
     7741 acggcgatgc cgccagggcc atagccttcg taacggattt cgtcgtaagc ctcggcgtcg
     7801 ccaccctggg ctttcttgat ggcgcggtcg atcgagtcct tcgacatgtt ttcagcgcgg
     7861 gccgcgatga tggcagcgcg cagccgcggg ttcatggctg ggtccggcat ccccagcttg
     7921 gccgccacgg taatttcacg ggcaagcttg ctgaacagct tggatttcac cgcatcctgc
     7981 cggcccttgc ggtgcatgat gttcttgaat tgtgaatgtc cggccatcgc ctcgttcctg
     8041 gatcgcccta ttgaagtcaa ccatgactcg tcatgccggt cccttggtcg cgagcaccca
     8101 cgcctttcaa agccttaaaa gctcaagacg tggatggtcg gaactaaccc ggccacgacg
     8161 atgtggatag gccgcaggta taggacgcaa gggcgcagat ttcaaacctc agaggcaccc
     8221 gaggggggct ggcggaggtt gaagctggtc gcccagaccc ttaagaaata ccaatgagcg
     8281 ctgctgcgac catccgggcg atctaccgtt atcccgtgaa gggcttgtcg gcggaacgct
     8341 tggtcgcatc ggcgcttaag cccggtgaga cgctggcggg cgaccgccgc tacgccatcg
     8401 agaacggcgc cagcggcttc aatccggcgg cgcccgcata tctgcccaag cagcgatttc
     8461 tcatgctgat gaaaaacgag cggctcgcac gccttaatac gcattttcac gatgccacgc
     8521 aggtgttggt aatcgaggaa ggcggtcggg agctcatacg gggcgatttg ggcacaccag
     8581 ctggcagcgc cgccatcgaa ggatttttcg cgagcttttg tgcgggtgaa ctgcgcgggc
     8641 cgccaaaaat cctggccgcg cccggccaca gcttttccga cgtcgccaaa aaagtggttt
     8701 cgcttattaa cctcgcctca gttgccgcta tcgaagacat gatcgggcgc ccggtcgatc
     8761 cactgcggtt tcggggcaac ctttatgtcg agggttggcc cgcctggcgc gaattcgatc
     8821 tgctcggccg cgaaatcgca atcggcgcgc aggcgcgcgc aaaagtggtg aagcgcatcg
     8881 tccgctgcgc tgcgaccaat gtagaacccg tcactggcat tcgcgatctc gatattccgt
     8941 caactctctt gcgccatctc gatcatgccg actgtggggt ctacgccgaa gtgacgacag
     9001 gtggcgacat cgcgaccggc gatgcggttg ccttatcacc gcccgtcttt ggggagggta
     9061 gggaggggga atcaagcacg gagcttgtgg aaagttgccc cagcctctcc aagacgggtt
     9121 gggatcagca aacgtccggc gcggctggtc gttgaccatg caggtgctcg tggtcggtgc
     9181 cggcattatc gggctcgcga tcgctcgcga agccgcgcat gcgggacacg atgtcatcgt
     9241 ggcggaggcc gaaccccata tcggcagcgg catctcgtcg cgcaacagcg aggtcatcca
     9301 tgccggcatc tactatccga ccggttcgtt gcgcgagcgc cactgcgccc gctcgcggcg
     9361 aatgctctac gaattttgtg cttctcacgg ggtgccgcac cgaaagctcg gcaagctcgt
     9421 tgtggtcggt cgcgatacgg atattccgat gctggaaaag ctatttgctc aggcgacccg
     9481 gaacggcgtc gaaggcctgc gtatgctgga cggccccgaa gcgattcgga tggagccggc
     9541 gctcgcctgc gcggcggcgt tccattcgcc cgagaccggc atcatcgata gtcatcgcta
     9601 tatgctagcg ctgcaaggcg acatggagga tgctggcggg gtggtggcgc tcaacacccc
     9661 ggtgaagcgg cttgtgctca ccccggccgg ctgggaggtt cggttcggtg gttcggagcc
     9721 aggatctctc acggtcgacg cagtggtgaa ttcggcgggt cacggcgctc aggagctcgc
     9781 gcgtgccacc gaaggctatc cggcagatcg cgtgccgcgg ctcgtactcg ccaagggaaa
     9841 ttatttttcc tacacggggc gtgcggcatt caagcgtctc atctatccgg caccagtgcc
     9901 gggcgggctc ggcatccatg ttacgctcga tctcgccggc cgcatgcgat tcggccccga
     9961 tgtgcagtgg atcgacgatt acgacttcaa tgtcgatccc ggacgtgtcg cgacattcta
    10021 tccggctatc aggacctact ggcccgacct gccggacggc acgctcgtcc ccgattacgc
    10081 tggaatacgt cctaagttga ccgctcaggg tgaacccgct gcggatttca ggattgatgg
    10141 cccggccgag cacggcctgc caaggattgt gcatctgttc ggcatcgagt cgccaggctt
    10201 gacggcgtcg ctgtcgatcg ccgtggaggt ggtggcgaag ctagcggaat gttgatttcc
    10261 gttccgccaa tgagccatcg caggctgttg ttgcaacgtt gaagggagcg cgagaatgcc
    10321 aatccatcgc tttcacaatc cgcccgcgat cgggaagcca tccggctata cccatgtggt
    10381 cgaggcagcg agcccaggtc gcatcgtgta catcgcgggc cagctcggcc ttgaccgcga
    10441 taacaagatt gtcggcgctg ctggcgactt ccgcgcccag gccgagcaga ccttcgtcaa
    10501 cctcaaaaac gccctcgccg cggcaggcat cggtttcgag catgtggtga agctcaacaa
    10561 ttatctcatc gacattgcgc atctcggcat tttccgcgaa gtgcgcgacc gctacatcga
    10621 cacctcggcg ccgcctgcca gcaccaccat tgcgatctcc aatctggcgc ggctcggtgc
    10681 gttgatcgag gtcgaggcgg ttgcggtggt gcccgacaag gcgcgcgtca gtgctgcgcg
    10741 cagcaaagct gcacccgtca agaccacacg aggcggcacg aggcccgtca aggcggccgc
    10801 caaacctaag gcacgatcac aaaaacataa gtgagaatgg cgaataccgg cagcagtact
    10861 gcgcttgacc agatcatgaa gccgaagaag cttggcattc tcacgccgcg ctccgtggcg
    10921 atggcataga tcatgaaatt cggcgcgttg ccgatataag tgagtgcgcc catgtagacc
    10981 acacccatgg aaatcgccgc gagagtcgca gcgagttcgc ccatcagcct gacggcatcg
    11041 ccgcccgcaa gttcgaagaa gaccagatag gtcggggcat tgtcgagaaa tgccgacaga
    11101 aagccggtga gccagaaata gacgagattg cggggctctc cagccccgcc cgtcatgagc
    11161 gtcaacagcc aagaaaacgg tccggcgttt cccgcgcgta gcgtggccag cacgggggtg
    11221 atgcagatga agataccggc gaacagcttt gcgacttccc aaattggctc ccaggtgaag
    11281 ccgttacgct cgcggtgctc ctccggcgtg agtataagcg acgcaacaat gaggcacatg
    11341 agtgcgatgt cgcgaacgat atcctgcagt tccagaatgg tgccatagac gtcgaatgtg
    11401 atgccggact tccatagcgc ggacagcaga atcgccccga taatgagacc gatgagtggc
    11461 aggttgacga ggccgcgcac gcggattggc tggctggacg gcgtttcgcc gaccacggcg
    11521 acgcggcgat cttggcgata gagccacata tcaactgcta taaaaatgag gagcacaagc
    11581 gctgccgata aggcggttgg tttccacagg tacgtcgtgg tccagaagaa atcgatgccg
    11641 tgcagaaagc cgacgaacag cggtgggtcg cccagcggcg aaagcgcgcc accgatattg
    11701 gcgaccagga agataaagaa aaccaccaca tgcacattgt gcagccgggc tgaatttgct
    11761 cgcaacagcg gcctgatcag aatcatggcc gctccggtcg tgccgacaac gctcgcgatt
    11821 gctgttccga acgccaggat ggcagtgttg acgaacgggg tgccgcgcag gctgccggtg
    11881 agcaaaatgc cgccccccac cacgtagagg gccataagca acacgatgaa gctcagatat
    11941 tcgcccaaca ccgcatggac aagcactgcg attgcagtcg tggtaccgtg gagtgccgcc
    12001 agcggcgtga cggtgagcgc gctccacatg aacgagacct tgccgtaatg ggcgtgccag
    12061 aactttggtg ccagaagcgg accgaaggcg atcgaggaca acaagccgac aaacggcagt
    12121 gcccatggcc acgacagcat gagattgtcg aggtctgcgg ccttcgcggt tgccggcgca
    12181 ccgagggcca cgatgccgac aacgagggcg ccacaactga ttttcgatgg catgaacatc
    12241 agtggagatc cggacagacg tgaaccaagc aaaggtatcg ccggacaagt gcattgccgg
    12301 gggagagttg cattgccaac aacagcgctt ttgtattgcg gtcggattgt ggaacgagcc
    12361 aaggcaggtt acctgacagc aaccagagtt gcgagtcgag accatgggca gaccggattg
    12421 agaatccttc acgccatcat cagcccgggc ttctacggca gcgagcggta ttgtatcgac
    12481 cttgccgttg cacagtcgcg cgcgggccac gacgtcaccg tgctggtggc agatgcaggt
    12541 tcctggcaaa tccgccgtgc gatcgcgcag gctgatgatg atggagcgca tagcaacata
    12601 gtgcgtctca tcgctcttcc gggctatgtt ccgtcgtggc tgcatcgtcc ggccgccgca
    12661 gtagtgctct ggctcaggcg ccccaacatc gtccacacgc atcttaaccc ggcggcgcgg
    12721 cgcattggcg cgatcgcgca gcggcttggt attccacatg ttctaaccct gcatctcgat
    12781 tacgatgcaa acgagcatgc gtcgatcgat gggctcgtgg ccctcaatgg gaggcagcgc
    12841 gaacaaatcc caccggattt tgccggcgca gtgacgatca tttggaactg gttgccttcc
    12901 cgcgtggagt ccagtctggc gcgtgtgcgt ccggtggacg tgcggcgcct gcgcggcggc
    12961 tgggatgccg acgacaccac cgtcgtgttc gggagcgttg gccggctgat gcctgagaag
    13021 ggcatggacg tgctgatccg ggcgttccgg ctggcgttcg ccgccggcaa ccccaatgta
    13081 cgcttagtga ttgtcggcga tggcccgcag cgcagcgagc tagtgcagct tgcgggtagc
    13141 gaccgccgca tcgtgctcgc cggcgtgcag agcgagatcg cgccgttcta tcgtgctttc
    13201 gacgtgtttg tgagcgcggc gcggttcgag ccgttcggct tagccatcat cgaagcaatg
    13261 gctgccggct gccccctgat tgcgactcgt atccacggca cagtggagtt tgtaaccgat
    13321 ccccgcacct tatggacgga accagacagc gatagccaac tgggcttgca gttgcgtaag
    13381 gcggcgatgc tcaaccgtga acgtttcgtc tacgacatgt cacggctcac actggcgcgt
    13441 gccgtcaacc agatggacga cttttacagc cgcctgatag ggacgcgata gagcgcgtcc
    13501 ttagtaagga tgcaatcgat gcggtcatcg atcaaagccg ttagggcttg ctccggcgtg
    13561 tctatgatcg gctcctcgtg gacgttgaag ctcgtattga ccagcaccgg cagtccggta
    13621 cgtttgtaaa aaagctcgag aacttggaaa tagagcgggt tttcggttgc ctcgattatc
    13681 tgagggcgcg ccgaaccgtc gacatgcacg accgccggaa tgcggtcgcg ccattcggga
    13741 cgaacgtcgc aggtgatggt catgaaccgt gccgcatgcg cgttaccggc gtgaatgtcg
    13801 aatactgtag cgacgtgatc ggcgagtacc acaggggcga atggcatgaa ctcggaccgg
    13861 ttgagccgct tattgatgga gtcgttgact tcgcgctgca ccggcgaggc gaggatcgag
    13921 cgtgcgccca gcgcacgagg tccgaattcc atgcgatccg tatagattgc cactgcctta
    13981 ccgccggtga gagcgtcaac ggccttctcc acgggcgcct cgcggtcagc tacgatctcc
    14041 ggatgttggc ttgctgcagc cgggaagcgg acatcatggt tggcaccgag ataaagttcg
    14101 ctgagcagat agcggttcgc cagccaggtc cgtgcgccgt cgcgttcgcg cagatagagc
    14161 aagcaggcgc cgaccggcag gccttcgtcg cccatggctg ggaagatgaa gacgtttttc
    14221 gctgacgtcg tttccagcac ggcgcggttc agccgcacat tggaaaacac gccaccgccg
    14281 agtgcgagcg aggtgaggct ggagttgcgg ataagcgctt cgaccgcacg gcagatcacg
    14341 tgctcggtca cgacttgcac ggaagcggcc gcgtcctcgc gcgacaggcg tttgcagatg
    14401 tcgaaggcgt ggtcccgcat ggcggagtag ttcggatagt cggacgtcgc ctccccccgg
    14461 tcgtcgacgg agaaatgcgc gatcagctcc tcgccggctt tcggcaggcc gaatgccgac
    14521 aagccggtga gcttgccctc atgccgattg gggatgaagc ccagcgcttc agtgaagaaa
    14581 ttgtagagca gaccgacgct attgaccttc atgggcaggt tgaggttttc gtcgccgccg
    14641 aacacgagcg cgatgtcgcc ttgccggccg gttcgcgcac tataggcgac atcatcaccg
    14701 aaaccgtcgg ccgtgtagat cagtgcgtca tcgaattcgg agaagaaata cgctggaacg
    14761 ccgtgggcgg cgtggtgatt gcagaaatag agcgccgccc gacggaagcc gtggcgctcg
    14821 cggaacgaag gcgcgtcgaa cacctcaagg gccttcttgg tgctctgctt gcgcatcata
    14881 taggtcattt ggtacaggcg cctattatct gtgaggcgcg cataaagctg tcgcgcccac
    14941 atgcgaccct gaagccggaa cgactgcatc tcgaactgcg atcgggtgga gcacaccaca
    15001 tcgacgtcgc gccgcaatat cccagcgatc gcaagacatt cgtcgatcgc ccgctgcggc
    15061 agttcttccg caaccacgac gccgtcgttc ttccggcggg tcagccgctc ctgcgacacc
    15121 gccgccaata gtttatagtc gcgaaaaagg cacgccgatg cgtcatgaac cccgttgtga
    15181 ataccgagga gatacattca gccattccga ttgagccgac gacgccccgg ccgcctacgt
    15241 tttcacgtga tggatgtact tgcgggcgat gctgtgtcaa caggcggggc tggccctctg
    15301 ggtcaatgcg cctcgtccca attatcggcc gcgcgcgcgt cgacctggag cggcaccgag
    15361 agagcgacag cggggagcgg tgcctcctcc atcacgcgct tgaccaccgg gagtgtgcga
    15421 gtgatctctt cctccggaac ctcgaagatg agctcgtcgt ggacctgcag cagcatttgt
    15481 gccgacagat gctggatcgc gagggcgtcg tccatgcgga tcatggcgcg acggatgatg
    15541 tcggcggcgc tgccctgcag gcgcgcattg atggcggcgc gctcgttgaa cgcacggata
    15601 gacgggttcg aagccctgat gtccggatag tggcacttgc ggccgaacag cgtcgtcacg
    15661 tagccgttct tccggcattc ctccttagtg gagtccatgt aggcgcggat gccggggaag
    15721 cgctcgaaat attttttgat ataggctgct gcctcatcgc gcgggatgcc aagctggttg
    15781 gcgaggccga acgccgagat gccgtagatg atgccgaaat tgatcgcctt ggcgcgccgg
    15841 cgcacctcgc ccggcatgcc tttcaccgga acgccgaaca tttcgctcgc cgtcagcgcg
    15901 tgaatgtcgg tc
//
LOCUS       DATILV010000543         3257 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3965905, whole genome shotgun sequence.
ACCESSION   DATILV010000543 DATILV010000000
VERSION     DATILV010000543.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3257)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3257)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3257
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3965905"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(129..2162)
                     /locus_tag="VLJ17_12540"
     CDS             complement(129..2162)
                     /locus_tag="VLJ17_12540"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV23843.1"
                     /translation="MSVSPTPQTTGATLLIVDDDRAAREGLRSVFESAGHNTIGVPDA
                     PSALRLLHKQMCDLVVLDVELPEVDGLALCRLLRAQPTMTKLPLVVFSADDSEGRKVE
                     AFTAGADDYIVKPSTPGELVSRVNSHLNFAQRESHLMGSNRELSFLADLGRGLLRAIV
                     PEQVARRVAGAIYEGTNAAQSACAIKNNGQGLSVCVFDREGSAGSSALINMDRLERWL
                     DSARSKSPAWLSNTREFLFRDAQHETEYLVPIRFGEKIFGAMVVAFAAAEDCTEDERR
                     LISAAAQQAALAAQISTLYLGARESAATLAREVDRRTVESEMQQRFTEAIIDTLPLSL
                     YAIDRDYKIVAWNRNRELGELGLPRGEALGRNIFEVLTKQSRELLEREFAKVFATGEI
                     HRVEQESVTESGETNNWLISKIPMRADEDDQVSHVITVGENITARVKAHRAVARAEKL
                     AAVGRLAAGVVHEINNPLATIAACAESLEKRMQEGVFGNSPDAEDLREYLGLIRDEAF
                     RCKTITNGLLDFSRLRAGQRVPVDMRDVIKATARLVTHQQRGDNIQIVVEASAGLPSV
                     SGDVGQLQQAVVALATNAIDAMPEGGTLTLRAIRSDSRVLVQVIDTGIGIPPENMTKI
                     FDPFFTTKDVGRGTGLGLAVCYGILSDHGGRLDVRSSVETGTTFTITLPVAID"
     gene            complement(2506..>3257)
                     /locus_tag="VLJ17_12545"
     CDS             complement(2506..>3257)
                     /locus_tag="VLJ17_12545"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0052621 - diguanylate cyclase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sensor domain-containing diguanylate cyclase"
                     /protein_id="HSV23844.1"
                     /translation="AYSSMASLPLFKDDLLLGALSVYSMSLNEYSDDQIRLLETVTRL
                     ASDALANAVNHARAESNALTDSLTGLPNARRLHVRFEEEVSRARRTGKPFQVIMLDLD
                     DFKLVNDTFGHKLGDRMLREVAGIVHAQLREYDFLARYAGDEFVAIVNDATVQQVEEL
                     RERIERTVSDFSINIRAQGRARVGISVGSAVFGVDGETLDQLLVAADQAMYRAKSTHK
                     TSVFQAGSKKSSSSKGEAELSDGPLVTTAIN"
BASE COUNT          667 a          944 c          935 g          711 t
ORIGIN      
        1 agcctgtacc cgatacccca agcgttgcag ttccttctgc aacaccaaac gtaggttggc
       61 ctcgtcttcg gctattaata accttgcgtc acgctgttcg ttcacttttt gctccgcacc
      121 aggtcagttc aatcaatcgc gacgggcaac gtaatcgtaa acgttgtccc agtttccacg
      181 ctggatctca cgtccaggcg gccaccgtga tcagataaaa taccataaca gacggccagc
      241 cccagcccgg taccacggcc gacatccttg gtggtaaaga agggatcgaa aatcttagtc
      301 atgttctcgg ggggaatgcc tatgcccgta tctattacct gaaccagcac ccgggaatct
      361 gagcggatcg cccgcaaggt cagagtcccg ccctccggca tggcatcgat cgcgttggta
      421 gccaatgcga cgactgcctg ttgtagctgg ccgacgtcgc cggacacgct cggaagaccg
      481 gcggaggctt cgaccactat ctgaatgttg tcgccccgct gttggtgtgt cactaatcgc
      541 gcggtggctt tgattacgtc cctcatatca accggcacgc gttgcccggc gcgcaggcgg
      601 ctgaaatcaa gcagcccgtt agtaatagtc ttgcagcgaa aagcctcgtc gcgaatcaag
      661 ccgagatatt cgcgcaggtc ttcagcgtcg ggcgagttgc caaaaacgcc ttcctgcatt
      721 cgcttctcca gcgactcagc acacgcggcg atggtcgcca ggggattgtt gatttcgtgc
      781 actacaccgg cggccaggcg gccgacggcg gccagttttt cggcgcgcgc cacggcccgg
      841 tgagctttga cgcgagcggt aatgttttcg cccactgtga tcacgtgcga gacctggtca
      901 tcttcgtcgg ctcgcatggg gatcttgcta atcaaccagt tgttcgtctc gcccgactca
      961 gtaacacttt cctgttcgac gcgatgaatc tcgcccgtgg caaagacttt ggcaaattcg
     1021 cgttccagga gctcgcgact ttgcttggtg aggacctcaa aaatatttcg tcccagggcc
     1081 tccccacgcg gcagtccgag ttcgcccagt tcgcgatttc ggttccaggc gacaatctta
     1141 tagtcgcgat cgattgcgta gagagacaag ggcagcgtat cgatgatcgc ctcggtgaag
     1201 cgctgctgca tttcagattc gactgtgcgg cggtcgactt cccgggccag ggtggcggct
     1261 gattcacgcg ccccaaggta cagagtcgag atctgcgcag ccagtgcagc ctgttgggca
     1321 gcggcactta tgagacgccg ttcatcttca gtgcaatctt ctgccgccgc gaaagccacc
     1381 accatcgcgc caaaaatctt ttcgccgaaa cgaatcggca ccagatattc cgtttcatgt
     1441 tgtgcgtcgc gaaacaaaaa ctcccgggtg ttgctcagcc acgccggaga ctttgagcgc
     1501 gcggaatcca gccagcgttc cagccgatcc atattgatca gagcagagct gcctgcgctt
     1561 ccttctcgat caaacacaca caccgagagt ccctggccgt tgttctttat ggcacaagcg
     1621 ctctgcgccg cgttcgtccc ttcgtagatg gctccagcga cgcgacgcgc aacttgctcg
     1681 ggcactatcg ctcgtaggag gccgcgacca aggtcggcga gaaagctcaa ctcacgattg
     1741 ctccccatca ggtgcgattc gcgctgggca aaattcagat gagagttgac ccgcgagact
     1801 aactcgcccg gtgtggaagg cttgacgatg taatcgtcgg cgccggccgt gaaggcttcg
     1861 actttgcggc cttcgctatc gtcggcggaa aaaacgacca acggcaactt cgtcatcgtg
     1921 ggttgggcgc gcagcaggcg gcaaagcgca agaccgtcga cttcgggaag ctcaacgtcg
     1981 agcactacca ggtcgcacat ctgtttgtgc aacaggcgca gcgccgacgg agcatccggc
     2041 acgcctatag tgttatgtcc ggcgctttcg aagacgctgc gcagaccttc gcgtgccgct
     2101 cggtcgtcat cgactatcag cagagtggcg ccggttgttt gtggtgtggg cgaaactgac
     2161 attcttcgtt gcacgggttt gtgtagtcct tcgctttgcg aggtggttcc tgaagatgag
     2221 gaggcgtaat tagaaaaccg cttgcacagc cagcggtcaa cgggcctggg acaaaggcgt
     2281 tggattcagc cggccagtca gaacgccggc cggttcgcgg ataaggcaga aacgtggacc
     2341 cgcgtaccac tcttccaatt tgacggctga gagccgagtt gtcaagcgtt tgttggggtt
     2401 tctaacgcaa attgggattc agcgagcaac gccaacatcg aggccgtgat ttatgcaagc
     2461 tggcagttgt gctacatctg atccagacct tgagtaaaag cgaatctagt taatcgcagt
     2521 ggtgaccagc gggccatcgg aaagttctgc ctcacctttg gaggaggaag actttttgct
     2581 gccagcctgg aagacgctgg tcttgtgggt tgacttggcg cgatacatag cttgatcggc
     2641 ggctacaagg agttgatcca gcgtttcgcc gtcaacgccg aagacggctg agccgacgct
     2701 gatgcctacc cgtgcgcgac cctgcgcgcg gatgtttatt gagaaatccg acacggttcg
     2761 ttcgatgcgc tcacgcagtt cctctacctg ctggacggtc gcatcattta cgatcgcgac
     2821 aaattcgtct cccgcatagc gcgccagaaa atcatattcg cgcaactgag catgtacgat
     2881 gccggcgacc tcgcgcagca tgcgatcgcc gagcttgtgt ccgaaagtat cgttgaccag
     2941 cttgaagtcg tccaggtcaa gcatgatcac ctggaacggt ttgccggtgc gtcgggcgcg
     3001 cgacacttct tcttcgaaac gaacgtgcaa tcggcgcgcg ttcggcaggc cggtgagcga
     3061 atccgtcagt gcgtttgatt ccgcccgcgc atgatttacc gcgttagcca gcgcgtcaga
     3121 cgcgagccgg gtaactgttt ccagtaggcg gatctggtcg tcgctgtatt cgttgagact
     3181 catcgaatag accgagagcg ctcccagcaa taggtcgtcc ttgaacaatg gcaatgaagc
     3241 catcgagctg tatgcag
//
LOCUS       DATILV010000544         2360 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1664528, whole genome shotgun sequence.
ACCESSION   DATILV010000544 DATILV010000000
VERSION     DATILV010000544.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2360)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2360)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2360
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1664528"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..731)
                     /locus_tag="VLJ17_12550"
     CDS             complement(<1..731)
                     /locus_tag="VLJ17_12550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HSV23845.1"
                     /translation="MLIKRTQRQTPRGALDASQGQPGSGFDRRSFLRRSGVAVGSLAT
                     LGALPLGAVRKAAAGPPPAVGAAVAIRKNICTHCSVGCTVTAEVANGVWIGQEPSWDS
                     PINRGSHCAKGAAVRELVHGDRRLKYPMKLINGQWTRLSWDKAIDEIGDKLTAIREKS
                     GPDSVYWLGSAKFSNEGSYLFRKFAAFWGTNNVDHQARICHSTTVAGVANTWGYGAMT
                     NSYNDIRNSKTLVIMGGNPAEAHPVS"
     gene            complement(743..952)
                     /locus_tag="VLJ17_12555"
     CDS             complement(743..952)
                     /locus_tag="VLJ17_12555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HSV23846.1"
                     /translation="MKTGQIVPKAKLGRREFLRAVGAGATVAAASVGPLTGEAIADTE
                     SSREKRKSRYRETEHVKTFYRVNRY"
     gene            complement(949..1647)
                     /locus_tag="VLJ17_12560"
     CDS             complement(949..1647)
                     /locus_tag="VLJ17_12560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD family protein"
                     /protein_id="HSV23847.1"
                     /translation="MSDNGLGGAIGGTEVGGASTRCGGMVTSCELDEVDVARGREYAL
                     LARLLSRAPDRFLLDRLADLPGDSSPLGVAHATLAEAASRISVERVEREYFDLFIGLG
                     RGELLPYGSYYLSGFLHERPLARVRAHLGRLGIERAEGQAEPEDHAAILCEVMAGLTS
                     GELTATPGADSEVFEHHLSPWIARFFADLEHAEAADFYRSVGALGRVFIEIETAAFAL
                     AKAADSGQQKEQRR"
     gene            complement(1876..>2360)
                     /locus_tag="VLJ17_12565"
     CDS             complement(1876..>2360)
                     /locus_tag="VLJ17_12565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3306 domain-containing protein"
                     /protein_id="HSV23848.1"
                     /translation="VRAFLAPGVPAELTRAALRRTWTCDPQIRNFVGLADYDWDFNAA
                     GAVAGFGPLPATDEIGKIATRIVELNRASEDAGGATNFAPTIPTPETEAGPTPETEAG
                     RVAPAEADNRATPMKSAGMAQSDDIARHVGTAAAKQHENAKPETPNTVRHRHGGALPK
                     "
BASE COUNT          407 a          780 c          699 g          474 t
ORIGIN      
        1 gacaccggat gcgcctcggc gggattgcca cccatgatga ccagcgtctt gctattgcgg
       61 atgtcgttgt agctgttggt catcgcgccg tagccccagg tattggccac gcccgcgacg
      121 gtcgtcgaat ggcaaatgcg cgcctggtgg tcgacgttgt tggtgcccca gaacgccgcg
      181 aacttgcgga acaggtatga cccctcgttc gagaatttcg cagagcccag ccaataaact
      241 gaatcaggcc cggacttctc gcggatcgcc gtcagcttgt cgccgatctc gtcgatggcc
      301 ttgtcccagg acagcctggt ccattgaccg ttgatgagct tcatcgggta tttgaggcgg
      361 cggtcgccat gcacgagttc gcgcaccgcc gcgcccttgg cgcaatgcga gccgcgattg
      421 attgggctat cccaactcgg ctcctggccg atccaaaccc cgttcgcgac ctccgccgtg
      481 accgtgcagc cgaccgaaca atgggtgcag atgttcttgc ggatcgcgac cgcggcgccg
      541 accgcaggcg gcggcccggc cgcggccttg cgcacggcgc cgagaggcaa cgcgccaagt
      601 gttgcgaggc tgcccacggc cacgccggag cggcgtagga aactgcggcg atcaaagccg
      661 ctacccggtt gcccttgcga ggcgtcgagc gcgccgcgcg gcgtctgacg ttgcgtccgc
      721 ttgatcagca cgggtgcctc cctcagtaac ggttaacccg atagaaggtt ttcacatgtt
      781 ccgtctcgcg ataacgcgac ttacgcttct cacggctcga ttcggtatcg gcgatagctt
      841 cgccggtaag cggcccgacg cttgccgccg cgaccgtggc gccggccccc acggcgcgaa
      901 gaaactctcg acggcctagc ttagccttcg gcacgatctg ccctgtcttc atcgccgctg
      961 ttccttctgc tgtccgctgt ccgccgcctt ggccaacgcg aaggcggcgg tctcgatctc
     1021 gataaacacc ctgccgaggg cccccacaga gcggtagaag tcggcagcct cggcgtgctc
     1081 caggtccgcg aagaatcgcg caatccacgg cgacaggtga tgctcgaaca cttcgctgtc
     1141 ggcacccggc gttgccgtca gctcgccact cgtaagcccc gccatcacct cgcacaggat
     1201 cgcggcgtga tcttctggct cggcctggcc ttcggcccgc tcgatgccga gccgccccag
     1261 atgagcacgc acccgcgcca gcggccgctc atggaggaac cccgaaaggt aatacgaccc
     1321 gtaggggagg agttctcccc gtccgagccc gatgaagagg tcgaaatatt ctcgctcgac
     1381 acgctcaacg ctgattcggc tggcggcttc ggcaagtgtc gcatgggcaa caccaagcgg
     1441 acttgaatcg ccgggcaagt ccgcaaggcg gtcaagcaga aagcgatcgg gtgcacgcga
     1501 aagcagccgc gctagcaagg catattcccg ccctcgcgcg acgtccacct cgtccaattc
     1561 acacgacgtc accatgccgc cgcagcgcgt cgacgcgccg ccgacctcag tccccccgat
     1621 cgcgcccccg agaccgttgt ctgacatatg gtcactttag ctatatctgc ctcaatgtgc
     1681 gctcatattg gaaaccccgt caatagtcgc ccccgagggc aacaaattct tggttctggt
     1741 tttgccatgt ttctttgcgg agctcattga ttgcgcgtga ggcaaaatgg cgggtatttg
     1801 agtatggccc tatcttttta atcctagatt cgaccaccgt gggtgttcga ctttcatccg
     1861 cgttaaccgc cacaattact tcggtaacgc acctccgtgt cggtgccgga cagtgttcgg
     1921 cgtttcgggt tttgcatttt catgttgctt cgcagcagcg gtgccgacgt ggcgtgctat
     1981 gtcatcggat tgcgccatgc cagcgctttt cattggcgtc gccctattgt ccgcttcagc
     2041 aggggcgact cgaccggcct ccgtttccgg tgttggtccg gcctccgttt ccggtgttgg
     2101 tatcgtgggt gcgaaattgg tcgcaccgcc tgcgtcctca ctggcacgat tgagctcgac
     2161 gatccgagtt gcaattttgc caatctcgtc cgtcgccggg agcggaccga agccggctac
     2221 ggcacctgcc gcattgaagt cccaatcata gtccgcaagg ccgacaaaat tccttatctg
     2281 cggatcgcac gtccaagtgc ggcgaagtgc cgcccgggtc aactcggctg gaacgcccgg
     2341 ggcaagaaac gcccggacgt
//
LOCUS       DATILV010000545        13166 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2174355, whole genome shotgun sequence.
ACCESSION   DATILV010000545 DATILV010000000
VERSION     DATILV010000545.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 13166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13166
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2174355"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..838)
                     /locus_tag="VLJ17_12570"
     CDS             complement(<1..838)
                     /locus_tag="VLJ17_12570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CtpF protein"
                     /protein_id="HSV23849.1"
                     /translation="MIRYQDKTANPDHAAAPAEEFIAPAPRVSVQAFCETVETASIVQ
                     AAGEDRRLAKVHLRLQMGGIAAALEAYRTSPTPNVVILESENQGEGILARLDELADFC
                     DASTRVVVIGRHNDVLLYRDLIRRGVSEYLISPLTAIDVVRAICALFNAPDAKPVGKI
                     MAVVGAKGGVGASSVAHNIAWAIAKDMQLDAVLVDLDLPFGTAGLDYNQDPAQGVADA
                     VFSPDRVDTAFVDRLLSKCTDNLSLLAAPATLDRIYDLGAEAFDPIFDVLRLAVPYVV
                     LDV"
     gene            complement(835..1581)
                     /locus_tag="VLJ17_12575"
     CDS             complement(835..1581)
                     /locus_tag="VLJ17_12575"
                     /inference="COORDINATES: protein motif:HMM:TIGR02522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CpaD family pilus assembly protein"
                     /protein_id="HSV23850.1"
                     /translation="MNLVVQPNTWSNLWPAALKVVTVALAGAWLAGCKTTETAEAVPY
                     PYDYKQRHPITIQEGKRTVELFVTRRQAGLTLSQRSSVEAFANYWHRDATGRIEIRVL
                     SRGGNDRAFGEAVAEIQALLEETGVPRSAIAVRPLRLADPSQLASIVLVYSRITAVAG
                     PCGRWPNDLGPGGGIEYLNNEPYWNLGCATQRNLASMVDDPADLVQPRGETPAYMARR
                     SVVLDKYRKGEDTKTQYQDPDKAKIADVGK"
     gene            complement(1604..3064)
                     /locus_tag="VLJ17_12580"
     CDS             complement(1604..3064)
                     /locus_tag="VLJ17_12580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018323512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II and III secretion system protein family
                     protein"
                     /protein_id="HSV23851.1"
                     /translation="MANWTLCRAAILLACQISLAALAMGFAVAAQRGPEPAPAADVKV
                     VASEFGSNFVPLGVGKSVVVDLPRDVRDVLVADPKIANAVIRTARRAYLIGVSIGQTN
                     IYFFDAEGRQLAGFDIAVTRDLNGMRGALKQMFPRGNVRVEAISDGVMLTGTVSTPIE
                     AQQAFDIAGRLVGDNNKVVNGIAVRGRDQVMLKVTVAEVQRDVIKQLGIDLSGSLKKG
                     TAVLNFTTSNPFSAALQTISNNNIAGQFGSITGTLRAMDRAGVIRTLAEPTLSAISGE
                     SATFLAGGEFPIPAGLSCDNTKIPPVCQTSVDFKKFGVSLTFTPVVLTEGRISLKVMT
                     EVSDLSSDNALTLSVPNSAAAVTIPSIRVRRADTTVEIPSGGALAMAGMIEEQTKQQI
                     NGFPALMQVPILGTLFRSRDYVNRQTELMILVTPYVVQAVAQKDLSRPDDGFADAPDP
                     STVLLGRFNRLYGTAGSAGPIDPLHTYRGNYGFILD"
     gene            complement(3088..3885)
                     /gene="cpaB"
                     /locus_tag="VLJ17_12585"
     CDS             complement(3088..3885)
                     /gene="cpaB"
                     /locus_tag="VLJ17_12585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly protein CpaB"
                     /protein_id="HSV23852.1"
                     /translation="MKVARLAVLGIAVVAGGGAAWLAGRSEPPPPPPSAPVATISTVD
                     ILVAKKDINIGQAVGADDMGWAAWPTESASPLFVHKSDRAGAITQLVGAIARVPIAAG
                     EPVRESKLIKANGSGFMAAILPSGMRAVSTEISPETGAGGFILPNDRVDVLLTRRDKE
                     TERLTGIESVVAETLLSDVRVLAIDQNVEEKNGQRVVVGKTATLEVLPRQAEMLGIGR
                     MQGTLSLALRSIADGTGRPPDSPLRDAGASNRVNMVRFGVSTTANPK"
     gene            complement(4093..4596)
                     /locus_tag="VLJ17_12590"
     CDS             complement(4093..4596)
                     /locus_tag="VLJ17_12590"
                     /EC_number="3.4.23.43"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HSV23853.1"
                     /translation="MFADAIRLLLFPGMMAFAASTDLFTMKISNRIPLILVCGFCALA
                     AFDGTSIVDVGSHFAAGSVVLLVCFAFFSLGWIGGGDAKLAAATTLWLGWAHLFEYVV
                     CASLFGGALTLLLLEFRKRLLPPMLARQAWLSRLHEPNGGVPYGIALAAAALVVYPTT
                     IWMSPGL"
     gene            complement(4765..4941)
                     /locus_tag="VLJ17_12595"
     CDS             complement(4765..4941)
                     /locus_tag="VLJ17_12595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008136883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp family type IVb pilin"
                     /protein_id="HSV23854.1"
                     /translation="MNTLVKRFVKDESGATAIEYGLIAAGISVAIIAAVKGLGTQLNA
                     TFGVITTQLASASK"
     gene            5432..5884
                     /locus_tag="VLJ17_12600"
     CDS             5432..5884
                     /locus_tag="VLJ17_12600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein N-terminal
                     domain-containing protein"
                     /protein_id="HSV23855.1"
                     /translation="MLTATLALVEAASPVASAQEMITVMLDQARIAKLPERATTMVVG
                     NPLIADVSIQAGGIMVVTGKGYGVTNLIAIDRAGKVLSDQLVQVKSPVDNIIIYRGIA
                     RESYSCAPDCAPRITLGDSPDYFDGTLNQTGSRNSRAQQGQSAATPAR"
     gene            6333..6902
                     /locus_tag="VLJ17_12605"
     CDS             6333..6902
                     /locus_tag="VLJ17_12605"
                     /inference="COORDINATES: protein motif:HMM:NF019428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TadE/TadG family type IV pilus assembly protein"
                     /protein_id="HSV23856.1"
                     /translation="MHDPRVLISDYLSGLFARAKPCRLWRNQSGGTAVEFALVGAPFF
                     AVLMAIIESAIVLLSGQVLQTSTTNAARQIMTGQAQSAPWNAAQFKAYVCGGLTVMFD
                     CGKLAIDVRSAPSSQGFDAITPLTVTNSDGTLTNAYLYQPGSCGDDVIVTLIYQWPIL
                     AWGLGIGLVNSANHTNTLTASAAFRNEPC"
     gene            6913..7509
                     /locus_tag="VLJ17_12610"
     CDS             6913..7509
                     /locus_tag="VLJ17_12610"
                     /inference="COORDINATES: protein motif:HMM:NF019428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TadE/TadG family type IV pilus assembly protein"
                     /protein_id="HSV23857.1"
                     /translation="MIVCKLSSMFHRRCRTYVADGRGSSAVEFALLLPLMLVMYFGSI
                     EVTDAVSADRQAALVADTVANIAAQYSTVAGTDVNGFLTAAKYVLKPFSQNNLQVTLS
                     SVLIDASGNATVDWSATYRGTPRTGNVTSSIPAALRPANVSPCTTPGPSCTSVLWGEA
                     TYAYRPVIGWVVTGTINLRSQSFMVPRLAKCVHYNGAC"
     gene            complement(7551..8003)
                     /locus_tag="VLJ17_12615"
     CDS             complement(7551..8003)
                     /locus_tag="VLJ17_12615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007597714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HSV23858.1"
                     /translation="MDAIDRKILQELQQDASLSVAEIGHRVGLSSTPCWKRIQKLEAD
                     GVIERRVALVDQDKVGLGVTVFVSIETGDHSEAWLKAFAERVGAMPEVMEFYRMAGDV
                     DYMLRVVAPDIHGYDRFYKQLIAAIPLKNVTSRFAMEKIKSTTALPLP"
     gene            complement(8027..8977)
                     /gene="nudC"
                     /locus_tag="VLJ17_12620"
     CDS             complement(8027..8977)
                     /gene="nudC"
                     /locus_tag="VLJ17_12620"
                     /EC_number="3.6.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000210 - NAD+ diphosphatase activity
                     [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) diphosphatase"
                     /protein_id="HSV23859.1"
                     /translation="MTARFNLGTRPHLGYTDSVVERAAELRPDPTAIAVLEADARARA
                     LVIGGERVVMRKGAPYNDPAFTMAAADAISPKQERVFLGRYNGAPLFGIAIDTDAADA
                     LKGRNDLIVTDLRSIAIGALVAPEYLPPLAQAKALLVWHGRHRFCSTCGAPTRLAEAG
                     WRRDCAACGAGHFPRTDPVVIMLAIHGERCLLARQPRFAKNMWSCLAGFIEPGETIED
                     AVRRETLEEAGIICGRVSYFASQPWPFPMSLMIGCHAQALTTELKVDRSELEDARWFE
                     RDEVTAMMLRQHPDGLTATHPHAIAHHIIRAWLEADRNLV"
     gene            complement(9079..10857)
                     /locus_tag="VLJ17_12625"
     CDS             complement(9079..10857)
                     /locus_tag="VLJ17_12625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015315284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HSV23860.1"
                     /translation="MATILKEVDAVCIGVGFTGSILARELTKAGLKVVGLERGANRTS
                     REDFTLPSVRDDLKYAVRQELFQDAQLETVSLRHSPGETALPIRRLGSFLPGVGVGGA
                     GAHWNGVTWRLLPTDHNLRTHLENRYGKNAIPADLTIEDFPVSYDELETHYDRFEKLL
                     GISGKAGNLRGQKIDGGNVFEGPRRNEYPNPPLAMSMAGAIMEKAARELGYHPFRAPA
                     ANMSRAYTNPEGVTLGACEYCGHCERFGCEANAKSSPQSCILPVLLADNRFELRTHAY
                     VKELLYDKQGKKVKAVRYVDTRSGEEYEQPAGLVVLGAYVFNNNLLMMQAGIGEQYDP
                     VTGKGALGRNYCYQVSGNNVTVFFEDKIINPFMAAGASFGMNIDDFNGDNFDHSDLGF
                     FGGAWISAGTSNGRPIQTRPVPPGTPRWGRDWKKATAKWYNHAFGIGASGCNYAHREN
                     YLDLDPTYRDALGRPLVRMTYNFHENDYKLADYIGGVLGKIARTMNPTAMSSPAVRRG
                     NYNVVPYQSTHNTGGTITGANPKTSVVNRYLQAWEADNLFVMGASVFPQNASYNPTGL
                     VGALAYYAAEAITTRYIKSPGPLVQG"
     gene            complement(10870..11583)
                     /locus_tag="VLJ17_12630"
     CDS             complement(10870..11583)
                     /locus_tag="VLJ17_12630"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HSV23861.1"
                     /translation="MADETIPRRDFLKGAMVGTAALAAGGPTPAAAQTATSASVSPTP
                     SDAEPLLTLTATEHAFIVAAVDTLIPADELSPSGSACGVAIFIDRQLGGAYGMGARLY
                     RQGPFPKAKPELGYQLSLNPREFFRAGIESANAWARKTYGKDFDRLSEADREAALKAM
                     EDDKAPFPGFSSRMFFDALLQIAMEGFFADPIYGGNRDMSGWKMVGYPGLPATYREEI
                     KSYFGKRYDKPPRSIADFT"
     gene            complement(11704..12135)
                     /locus_tag="VLJ17_12635"
     CDS             complement(11704..12135)
                     /locus_tag="VLJ17_12635"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008131676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HSV23862.1"
                     /translation="MNNADSLPGWSLHPQLEQDCITIADLPLSRLLLSRDANYPWLLL
                     VPRHPGASEVIDLGTVEQGQLMTEIDLVSRALKAVTNCDKLNIAAIGNVVPQLHIHVV
                     ARRRDDPAWPKPVWGAAAARPYDLAARESFVAALRRKIGLL"
     gene            12216..12312
                     /gene="ffs"
                     /locus_tag="VLJ17_12640"
     ncRNA           12216..12312
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="VLJ17_12640"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            12413..>13166
                     /gene="dnaX"
                     /locus_tag="VLJ17_12645"
     CDS             12413..>13166
                     /gene="dnaX"
                     /locus_tag="VLJ17_12645"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HSV23863.1"
                     /translation="MSEADTAGRLAGPGLDLGATPLRHGAGYRVLARKYRPATFDDLI
                     GQEAMVRTVSNAFEAGRIPQAWILTGVRGVGKTTTARILARGLNYELPDGSIKAPTIR
                     MPVLGVHCASIMESRHVDVLEMDAASHNGVDDIRQINDAVRYTPVNARYKVYILDEVH
                     MLSNQAFNALLKTLEEPPPHAKFIFATTEIREVPITVLSRCQRFDLRRVDSDRLVAHL
                     EGILAKENVAAEPEALALIARAAEGSVRDALSL"
BASE COUNT         2651 a         3997 c         3903 g         2615 t
ORIGIN      
        1 gaacgtcgag caccacgtag ggaacggcaa ggcgcaacac gtcgaagatc gggtcgaagg
       61 cctcggcgcc aagatcatag atccggtcca gcgtcgcggg cgcggcgagc aggctcagat
      121 tgtcggtaca ttttgacaac aagcggtcga cgaaggcggt atcaacgcga tcgggcgaga
      181 acaccgcgtc ggcgacaccc tgtgcgggat cctgattgta atcgagccct gccgtgccga
      241 acggcaaatc gagatcgaca aggactgcgt cgagctgcat atccttggcg atggcccacg
      301 caatgttgtg cgccaccgac gaggctccga cgccgccttt ggcgccgacc accgccatga
      361 tctttccaac cggcttggcg tcgggcgcat tgaacagcgc acagatcgcc cgcaccacgt
      421 caatggcggt gagcggagag atcagatatt cgctgacacc gcgtcggatc aggtcgcgat
      481 agagcagcac atcattgtgc cgtccgatca caacgacgcg cgtactggca tcacagaaat
      541 cggcgagttc atcaagtcgc gccaggatgc cctcgccttg gttctccgat tccaggatca
      601 ccacattcgg tgtcggcgac gtccgatagg cctcaagagc cgccgcaatc cctcccattt
      661 gcaagcgcaa atgcactttg gcgaggcggc ggtcctcgcc cgcagcctgc acgatcgaag
      721 ccgtttccac ggtctcgcaa aacgcctgga ccgacacccg tggcgccggt gcgatgaact
      781 cttccgcggg cgcggcggca tggtccgggt tagcggtctt atcctggtat ctgatcattt
      841 tccgacatcg gcgatcttgg ctttatcagg gtcttgatat tgggtcttgg tatcttcgcc
      901 cttgcggtac ttgtcgagca ctaccgaacg tcgcgccatg taagcagggg tttctccacg
      961 cggctggacc agatcggcag ggtcgtcgac catggacgcc agattgcgct gcgtcgcgca
     1021 gccgaggttc caataaggct cattgttaag atattcgata ccaccgcctg gaccgagatc
     1081 gttcggccag cgcccgcacg gacccgcaac tgcggtaatg cgggaataga ccagcacgat
     1141 cgacgccagt tgcgagggat cggccagccg cagtgggcgc accgcgatgg cgctccgcgg
     1201 tacgccggtc tcttccagaa gggcctggat ctcggcgacc gcctccccga aggcccgatc
     1261 gttgccgccg cgagataaaa cacggatctc aatgcgaccg gtcgcgtcgc gatgccaata
     1321 atttgcaaaa gcctcgacac tagaccgctg ggagagcgtg aggccggcct gccgcctggt
     1381 gacgaacagt tcgaccgtac gtttaccttc ctggatcgtg atcggatggc gctgtttgta
     1441 gtcataagga tacggaacag cttcggcagt ttccgtcgtc ttgcagccgg caagccatgc
     1501 gccggcaagc gcgacggtca caactttcaa ggcggccggc caaaggttcg accatgtgtt
     1561 cggttggacc acgaggttca tcgtcatctc ctagccgtgc cgatcaatcg agaatgaagc
     1621 catagttgcc gcgataggtg tgcaacggat ctatcgggcc ggccgaaccg gcggttccgt
     1681 agaggcggtt gaaccgacca aggagaacgg tggaaggatc gggggcgtcc gcaaatccat
     1741 cgtccggccg cgacaaatcc ttttgcgcaa ccgcttgcac cacatagggc gtcacgagga
     1801 tcatcagttc ggtctgacga ttgacgtagt ctcggcttcg gaaaagcgtt ccaagaatcg
     1861 gaacttgcat aagggccgga aaaccgttga tctgctgctt ggtttgctct tcgatcatgc
     1921 cggccatcgc gagcgcgccg ccagagggga tttcgacagt cgtatccgcg cggcgcaccc
     1981 ggatcgaagg aatagttaca gccgcggccg aattcggcac cgacagggtc aaggcgttgt
     2041 cgctcgacag gtccgagact tctgtcatca ccttcaggct aatccgccct tctgtgagca
     2101 cgaccggggt aaaggtcagg ctgacgccga atttcttgaa atccaccgag gtttggcaaa
     2161 ccggcgggat cttcgtgttg tcgcacgaca gtccggccgg tattggaaat tcgccaccgg
     2221 caagaaacgt agcgctttca ccagaaatcg cgctcagtgt tggctcggcc agagtgcgga
     2281 tcaccccggc acggtccatc gcccgcaatg tgccggtgat cgaaccaaat tggccggcaa
     2341 tattgttgtt gctgatggtc tgcagagccg ccgagaaagg attgctggtg gtaaaattga
     2401 gcaccgcagt acccttcttg agcgatccgg aaagatcgat gccgagttgc ttgatgacgt
     2461 cgcgctggac ctcggcgacc gtcaccttga gcatcacctg gtcacggccg cgtaccgcaa
     2521 ttccgttgac gaccttgttg ttgtcgccga ccaggcgtcc ggcgatatcg aaagcctgct
     2581 gcgcctcaat cggggtcgag accgtgccag tcaacataac gccatcggaa attgcctcga
     2641 cgcgaacatt tccgcgcgga aacatttgtt tgagagcgcc acgcatgcca ttgagatcgc
     2701 gggtgaccgc aatgtcgaac ccggccagtt gccttccttc ggcatcaaaa aaatagatgt
     2761 tggtctgtcc gatgctgacg ccgatcagat aggcgcgcct ggcggtacgg atcaccgcat
     2821 tggcgatctt gggatccgct accaggacat ccctcacgtc acgcggcaga tcgacgacca
     2881 ccgacttacc gaccccgagc ggaacgaaat tcgatccgaa ttccgacgcc acgaccttca
     2941 cgtctgcggc cggcgcaggc tcgggcccgc gttgcgccgc gacggcaaac cccatcgcca
     3001 aggccgccag tgatatctgg caagccaaca ggatggcggc gcggcaaagc gtccaatttg
     3061 ccatcgcgga tgtcctcttg ctcgtcctta cttcggattg gccgtcgtcg agacgccgaa
     3121 ccgaaccata ttcacgcgat ttgacgcacc cgcatctctt aacggcgagt ccggggggcg
     3181 tccggttccg tcggcgatac tgcgcagcgc aagtgacaag gtcccctgca ttcgcccaat
     3241 ccccaacatc tcggcttggc gcggcaacac ctccagtgtc gcggttttgc cgacgacgac
     3301 acgctggccg tttttttctt caacgttctg atcgattgcg agcacccgca catcgctcaa
     3361 cagtgtctcg gcaaccacag attcaattcc ggtgaggcgc tcggtttctt tgtcgcgccg
     3421 ggtgagcagc acatcaaccc gatcgttcgg tagaatgaaa ccgccagcgc cggtctccgg
     3481 cgagatttcc gtagacaccg cgcgcattcc ggatggaaga atggccgcca taaagcctga
     3541 gccgttggcc ttgatgagtt tgctttcgcg taccggctcg cccgcggcga tcggtacgcg
     3601 cgcgatcgcg ccgacgagtt gcgtgatcgc gccggctcgg tcggacttgt gcacgaacag
     3661 cgggctcgcc gactcggtgg gccacgcagc ccaacccatg tcgtccgccc caacagcttg
     3721 gccgatgttg atatctttct tggcaacgag gatatccacg gtgctgatcg tcgcgaccgg
     3781 tgccgacggt ggcggcggcg gtggttccga ccggccagcc agccatgcgg cgccgccgcc
     3841 agccacaaca gctatgccta gaacagccag acgcgcgact ttcatctgct tctctttcca
     3901 aaacgcgact gcgagcaccg ttttcccgaa cgcgatggcc ggtaccgccg tcaatgacgt
     3961 gataaccccg aaccgcgtgg tgagggtcgg ggcgtgtcag cacaattcca tcaggcaatt
     4021 gtcaattcat ggttaacgca gagtattaaa acgtagttaa ttaaaagttt aataatactt
     4081 gtgcttcgct gatcacagtc caggcgacat ccaaatggta gttggatata ccacaagcgc
     4141 cgccgcggcg agcgcgatac catatgggac tccgccatta ggttcgtgca aacgcgataa
     4201 ccatgcttgt ctagccagca ttggcggtaa caggcgcttg cgaaactcca acaacaggag
     4261 cgtcaaggcg ccaccgaaca gcgaagcgca aaccacatat tcaaagaggt gggcccaccc
     4321 cagccacagc gtcgttgccg ccgcgagctt agcatcgccg ccgccaatcc aacccaggga
     4381 aaaaaacgcg aaacacacca ggagaaccac cgatccggcg gcaaaatggc ttcccacgtc
     4441 gacaatcgac gttccgtcaa aggccgcgag cgcacaaaat ccgcaaacca ggattagcgg
     4501 aatgcggttg gaaatcttca tcgtgaacag gtcggtggag gccgcaaacg ccatcatgcc
     4561 gggaaacagc agtaaccgga tagcatctgc gaacatgggc aagctccagg cggacaaggc
     4621 gcccccttcg ggttcccctg gttggagact gcgcgattgt tagagggatt ccattaattc
     4681 acagttctct tgagtgtttg gcacacaaga aaaaggcctc ggagctctgc gccccgaggc
     4741 cgtttcgctg tgggctccga gctattattt gctggcggaa gcaagctgcg tcgtaatgac
     4801 gccgaacgtc gcattcaact gagtgccgag gcccttgacg gccgcgatga tggcgaccga
     4861 gataccggcc gcgatcaggc cgtattcgat agcggtcgcg cccgattcgt ccttcacgaa
     4921 gcgcttaact agggtattca tctatgtact cctgtgtgca ctgtgactgc ctgagctcga
     4981 tcccaccggc gatggttgtt gccccgaccg atccggacct gattgccaaa ctaccggcat
     5041 gccattgcgg cgacgttaat ttgatcgcga aaactgcacc tatttagcag agaatgttca
     5101 ctggttaatt tcggttaaac tgggttgaag aaagtttgct catccgggcg ccgaacgggt
     5161 gaatgattcg agtttctttc catggcgttt cttggcgggc agcgcacagg tggccatttg
     5221 gagcagccgc tcttgatcaa acagagtttt actgcctgat cgcccagacc accgggcgac
     5281 atggcgacgt ttcgaattga ttcacctatt tgccgttagc tgatcgcggc gtgaatacat
     5341 agcgccggtc tcaggctcgg tcccgcttgc gtgtgagcat atctaaatgt gtgttgatat
     5401 ccggttcatg gcagtgattt ggcgcagcgt aatgctaacc gctacccttg ccctcgtgga
     5461 ggccgcgtcg ccagttgcct cggcccaaga aatgatcacc gttatgctcg accaggcgag
     5521 gattgctaag cttcctgagc gtgcaaccac aatggttgtc ggcaacccgc tgatcgccga
     5581 cgtgtcgatc caggccggcg gcattatggt ggtaaccggt aagggatacg gtgtcaccaa
     5641 cttgattgcg atcgaccgag ccggcaaagt gctttcggat cagctcgtgc aggttaagag
     5701 tccggttgat aatatcatca tttatcgcgg catcgcccgc gaatcttata gctgcgcgcc
     5761 ggactgcgcg ccgcggatta cgcttggcga ctctccggac tatttcgacg gtaccctgaa
     5821 ccaaactgga agtcgcaatt ctcgcgcgca gcagggccaa tcggcagcaa cccccgcgcg
     5881 atagatcgat ttgatttgtg cggattctga aagccggtcg tgcgtctttt gttaggtaca
     5941 tttcgattct catcgaatcg cctctctgcc gtcatccccg cgcagagaca ccccgccgcg
     6001 tcacgcggcg ctgatcccgt cttcgcgggc atctgcatct ttcttgccta gcttctgcaa
     6061 gcaaggcgtg gatgtccggg acaagcccgc cgtccagaga agggattgaa agatgactcc
     6121 aacatgcttt ccaacgtaag cgggccgccg gttcgcggct gttgtcctgc cttccggcca
     6181 agcagagact tttgaatcag agacttttga atccttggtt tatcggccat taatatcggc
     6241 cggcaaaatg gatcataacg aaaaaccgtt ccgttacacg agcgtgacaa aattgcgttg
     6301 atgtcccatc gatcgaacgg atttcagcca ctatgcatga tccgagagtt ctgatctcag
     6361 attatttaag cggcctcttc gcccgcgcca agccatgtcg gctgtggcga aaccaatcgg
     6421 gcggcaccgc ggtcgaattt gccctggtcg gagcgccgtt tttcgccgtt ctgatggcga
     6481 tcatcgaatc cgcaatcgtg cttctttccg gtcaggtgct gcagacctcc accacaaacg
     6541 cggcgcgtca gatcatgacc ggacaggcgc aaagtgcccc ctggaacgct gcgcagttca
     6601 aggcctatgt gtgtggaggc cttaccgtca tgttcgattg cgggaagctg gccatcgacg
     6661 tgcgttccgc cccctcctct caggggttcg acgccatcac cccactgacg gtcaccaact
     6721 ccgatggcac gctgaccaat gcatatctat accagccggg atcatgcggc gacgacgtca
     6781 tcgttacgct gatctatcag tggccgatcc ttgcctgggg cctcgggatc ggccttgtaa
     6841 attccgccaa ccacaccaac acactgaccg catccgcggc gttccgcaat gaaccttgct
     6901 gagaggccgg tcatgatagt ttgcaagcta tcgtcgatgt tccatcgtcg ctgtcgcacc
     6961 tatgtggctg acggacgggg cagctccgcc gtcgagttcg cgctgctgct cccattgatg
     7021 ctcgtgatgt atttcggcag catcgaggtc accgacgctg tcagcgccga ccgccaagcc
     7081 gccctcgttg ccgacaccgt ggcgaatatt gcggcacaat actcaaccgt ggccggcact
     7141 gacgtaaacg ggtttctgac ggccgcgaag tacgtgctaa aacctttctc gcagaacaac
     7201 ttgcaagtca cgctgtccag cgtgctgatc gacgctagcg gcaatgcgac ggttgattgg
     7261 agtgcaacgt atcgagggac gccgcgtacc ggtaacgtca ccagctcgat accggcggcg
     7321 ttgcggcccg ccaacgtatc tccgtgcacc actccggggc cttcgtgcac gtccgtgctg
     7381 tggggtgagg caacttatgc gtacagaccg gtcatcggtt gggtcgtgac cggaaccatc
     7441 aacttgcgca gtcagagctt catggtgccg cggctggcga agtgcgttca ctacaatggc
     7501 gcgtgctgac aaaaacgcag gctctgacgg acctgaggga ttgccggtgc tcaaggcaac
     7561 ggcaatgctg tcgtcgattt gatcttttcc atggcaaagc gggacgtgac gttcttcagc
     7621 ggaatggccg cgatgagctg tttgtagaat cgatcgtagc cgtgaatatc cggcgccacg
     7681 acccgcagca tatagtcgac gtcccctgcc atccgataga attccatcac ctccggcatc
     7741 gcgccgaccc gttcggcgaa ggccttcagc catgcctcgg aatgatcgcc ggtttcgatc
     7801 gacacgaata cggtgacgcc gagcccgacc ttatcctggt caaccaacgc gacccgtcgc
     7861 tcaatcacgc cgtcggcttc gagcttctgg attcgcttcc agcaaggcgt agaggataga
     7921 ccgacccggt gtccgatctc agcaacggac agcgaggcat cttgctgcaa ctcttggagt
     7981 attttgcggt cgatggcgtc cattcaaagt tctcttgcgc ttaatgtcaa acgaggtttc
     8041 ggtccgcttc gagccatgcc cggataatgt gatgggcgat cgcgtgcggg tgggtcgctg
     8101 tcaagccgtc gggatgctga cgcaacatca tggcggtaac ctcgtcgcgc tcaaaccagc
     8161 gggcatcctc caactcggaa cgatcaacct tgagttccgt cgtcaacgct tgggcatgac
     8221 agccgatcat caacgacatc ggaaagggcc acggctgcga cgcgaaatag gagacgcgtc
     8281 cgcatataat ccccgcctct tccagggttt cccgccgcac agcgtcttcg atagtttcgc
     8341 ccggctcgat aaatcccgca agacacgacc acatattttt agcaaagcgc ggctgccggg
     8401 caagaaggca gcgttcgcca tggatcgcca acatgatgac gaccgggtcg gtgcgcggaa
     8461 aatgccccgc gccgcacgca gcacaatcgc ggcgccagcc ggcctcagcg agtcgggtcg
     8521 gtgccccaca tgtcgagcaa aagcggtgac gtccgtgcca cacgagcagg gccttcgcct
     8581 gcgcaagcgg cggcaggtat tcgggcgcca ccaacgcgcc aatcgcgatg ctgcgcagat
     8641 ccgtaacgat gaggtcattg cgacctttca gcgcgtccgc ggcgtctgta tcaatcgcga
     8701 tcccgaatag cggtgcgccg ttataacggc cgagaaacac ccgctcctgc ttgggcgaaa
     8761 tggcatcggc ggccgccatc gtgaatgccg gatcgttata aggcgccccc ttgcgcatca
     8821 ccacgcgttc cccgccgatg accaaggcac gggctcgcgc atcggcttca agcactgcga
     8881 tcgctgtcgg gtcgggtcgc aattcggctg cccgttcgac gacgctgtct gtgtagccca
     8941 gatgtggcct agtcccgagg ttgaaacgtg ccgtcatgaa tcactccggc gaggtcaccg
     9001 aagctcgcat ggcagaaacg ttcgcgcaat gcaggcgcgc gcgccgcgcc ttcgcgggga
     9061 ggtcgaggag aggcaaaatc acccttgaac gagcgggccc gggctcttga tgtaccgcgt
     9121 cgtgatcgcc tcggccgcgt agtaggcgag ggcgccgacg aggccggtcg gattgtatga
     9181 cgcattctgc ggaaacaccg atgcgcccat gacgaacaga ttgtcggcct cccaggcctg
     9241 cagatagcgg ttgacgacgc tggtctttgg gttggcgccc gtgatggttc caccggtatt
     9301 gtgggtcgat tgatacggca cgacattgta gttgccccgc cgtaccgccg gcgagctcat
     9361 ggcggtggga ttcatggtac gcgcgatctt gcccaggacg ccgccgatat agtccgcgag
     9421 cttgtagtcg ttctcgtgga aattataggt catacggacg agcggacgac caagcgcatc
     9481 ccgataggtg gggtcaagat cgaggtagtt ctcgcggtgg gcgtagttgc agccggacgc
     9541 gccgatacca aaggcatggt tgtaccattt ggcggtcgcc ttcttccaat cacgccccca
     9601 gcgcggcgtg ccgggcggca ccggccgggt ctggatcggg cggccgttcg aggtcccggc
     9661 agaaatccag gctccgccga agaaaccgag gtcagaatgg tcgaaattgt cgccgttgaa
     9721 atcgtcgata ttcatgccga aggacgcgcc cgccgccatg aacggattga tgatcttgtc
     9781 ctcgaagaaa accgtgacgt tattgccgct cacttggtag cagtagttgc ggccaagcgc
     9841 gcccttgccg gtgacggggt cgtattgctc cccaataccc gcctgcatca tcaagaggtt
     9901 gttgttgaac acgtaggcgc cgagaacgac gaggccggcc ggctgctcgt attcctcgcc
     9961 actgcgggta tcgacatagc gaactgcttt caccttcttg ccctgcttgt cgtagaggag
    10021 ttccttcaca taggcatggg tgcgcagctc gaaacgatta tcggccagca gaaccggaag
    10081 gatgcaggac tgcggcgagg attttgcatt ggcctcacag ccgaaccgct cgcaatggcc
    10141 gcaatattcg cacgcaccga gtgtcacgcc ttccggattg gtgtaggccc tgctcatatt
    10201 ggcggccggc gcccggaacg gatgatagcc gagttcccgt gcggcctttt ccatgattgc
    10261 gccggccata ctcatggcaa gaggcgggtt gggatactca tttcggcgcg gcccttcgaa
    10321 cacgttgccg ccgtcaatct tctggccacg caaattgccg gccttgccgg aaatgccgag
    10381 cagcttttcg aatcgatcgt aatgggtctc caactcatcg taagagaccg ggaagtcctc
    10441 aatggtcaag tcggccggaa tggcgttctt gccgtagcga ttctccagat gcgtgcgcag
    10501 gttatgatca gtcggcagca gccgccaagt gaccccgttc cagtgcgcgc cggcgccgcc
    10561 gaccccaacg ccaggcagga atgagccgag ccggcgaatt ggcagcgccg tctcgcccgg
    10621 cgaatggcgc agcgacacgg tctcgagctg ggcgtcctgg aacagctcct gacgcaccgc
    10681 atatttgaga tcatcgcgca cgctcggcag cgtgaaatcc tcgcgcgagg tccggttggc
    10741 gccgcgttcg aggcccacca ccttgagacc cgccttggtc aactcgcgag ccagaatgct
    10801 gccggtgaac ccgacgccaa tgcaaaccgc atcgacttct ttgagaatag ttgccatcgc
    10861 gcgctcctgt taggtgaagt ccgcgatcga gcgcggcggc ttgtcgtacc tcttgccgaa
    10921 gtagctcttg atctcttccc gataggtcgc cggcaatccc ggatagccga ccatcttcca
    10981 ccctgacatg tcgcgattgc caccatagat cgggtcagcg aagaagccct ccatggcgat
    11041 ctgcaaaagg gcgtcgaaaa acattcggct ggagaagccc gggaacggcg ctttgtcgtc
    11101 ttccatagcc ttgagagccg cctcgcgatc cgcctcggat agacgatcga aatccttgcc
    11161 ataggtcttg cgggcccagg cgttcgcgga ctcgatgccg gcacggaaaa attcacgcgg
    11221 attgagggag agctgatagc cgagttcagg cttcgccttt ggaaatgggc cttgacgata
    11281 cagtcgcgcc cccatgccgt aggcgccgcc aagctggcga tcgatgaaga tagcgacgcc
    11341 gcacgcgctg cccgacggcg acagctcgtc ggccggaatg agggtatcga ccgcggcgac
    11401 gatgaaggca tgctcggtcg ccgtcagagt aagcagcggc tccgcatcgg aaggtgtcgg
    11461 tgatacactc gcggaagtcg ctgtctgggc cgcggcgggc gtcggcccgc cggccgcaag
    11521 cgccgcggtt ccgaccatgg cacctttgag aaaatcacgg cgcggaatgg tttcgtcggc
    11581 cataaagttc ctccctagtc caagcggata ttggacgcgc catctgtgcg tgttcgcacg
    11641 tggcggtaat tatcagtcgt agtctaatag gttttgccgc aagtagcgag acggcctcgg
    11701 ctgctacaaa agcccaatct tgcgccgcaa tgccgcgacg aaactttcgc gtgcagcgag
    11761 atcatagggg cgggcagccg ccgcgcccca caccggcttc ggccacgccg gatcatcgcg
    11821 ccgtcgcgcc acgacatgaa tgtggagctg cggcaccaca ttgccaatcg ccgcaatatt
    11881 gagcttgtcg caattggtca cagccttgag ggcgcgcgac accaagtcga tctcggtcat
    11941 gagttgcccc tgttcaaccg ttccgaggtc gatgacctcg ctcgcgccgg ggtgccgcgg
    12001 caccagcaac aaccacgggt aattggcgtc acggctcagc agcagccgcg ataacggcag
    12061 gtctgcaatc gttatgcaat cttgttcgag ctgaggatgc agcgaccatc ccggcaacga
    12121 atctgcattg ttcatctggg cgtccgtggt tgtccgggac ttgtcgattg tgctggcgct
    12181 tgcaatcccg tctggttccg ccgatataaa ggctgggagg ttggcggtgg acgagccact
    12241 cgccaaccgg gtcaggtccg gaaggaagca gccctaacga gctccggttc gggtcgctcg
    12301 tcaacctcct acccgctgaa tttgtttggt agggtgttag gagcgtggcg tcccgcccgc
    12361 tcttcaaagc caagaagcgg gcgcgacgcc cgcgctccgg ccgggaggca cgatgagcga
    12421 agccgatacg gccggccgcc tggcggggcc aggcctcgac ctgggcgcga caccgctccg
    12481 gcatggcgcc ggataccgcg tgcttgcccg caagtatcgg cccgccacct ttgacgatct
    12541 gatcggccaa gaagccatgg tgcggacggt ctcgaatgcg ttcgaggcag ggcgcatacc
    12601 acaggcttgg atcctcaccg gggtacgcgg cgtgggaaaa accacaacgg cccgaatttt
    12661 ggcgcgtgga ttgaactacg aactgcctga cggctccatc aaggcgccga ccatccggat
    12721 gccggtgctg ggcgtgcact gcgcctccat catggaaagc cggcatgtag acgtcctgga
    12781 gatggatgcg gcctcgcaca atggcgtcga cgatatccgc cagatcaacg acgccgtacg
    12841 ttatacgccg gtgaatgcgc gctacaaggt ctacatcctg gacgaggtgc acatgctctc
    12901 gaatcaggcc ttcaacgcac tgttgaagac actcgaagag ccgccgccgc atgccaaatt
    12961 cattttcgcc accactgaaa ttcgcgaggt gccgatcacg gtgctgtcgc gctgccagcg
    13021 tttcgatcta cgcagggtcg attccgaccg gctggtggcg caccttgaag gaattcttgc
    13081 caaggagaac gttgcggcgg aaccagaagc gctggccctg atcgcacgcg ctgcggaagg
    13141 ctcggtgcgt gacgctctgt cgttgc
//
LOCUS       DATILV010000546         6005 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1150394, whole genome shotgun sequence.
ACCESSION   DATILV010000546 DATILV010000000
VERSION     DATILV010000546.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6005
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1150394"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..744
                     /locus_tag="VLJ17_12650"
     CDS             <1..744
                     /locus_tag="VLJ17_12650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008196038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV23864.1"
                     /translation="VIIAIFVMWEILVRVFDIEQFVLPAPTAIFASGWEWRADMLDNA
                     WQTFVTTAVGFIFAVIFGLVGGVLFGSSTLVYDGFYPALVGFNTIPKVAVIPILVIWF
                     GIGTVPAIVTAFLISFFPILVNVAAGIATVEPELNDVLRALGAKRWQIVYKVGLPRSM
                     PYFFASLKVAITFAFVGSIVAETVAANKGIGNLMLVASSRFEVPLAFAGLLVTSIMGI
                     GMYLVAEFVERRTTGWARRGADAMGVPRA"
     gene            complement(823..960)
                     /locus_tag="VLJ17_12655"
     CDS             complement(823..960)
                     /locus_tag="VLJ17_12655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23865.1"
                     /translation="MRGRGMKRCPAEGAEHFALFAGASVLANNLLIVAALLKQMQLNE
                     H"
     gene            complement(1424..2317)
                     /locus_tag="VLJ17_12660"
     CDS             complement(1424..2317)
                     /locus_tag="VLJ17_12660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSV23866.1"
                     /translation="MTRPATALLAGILAATALPVFAQAPTPPPPLFSTTKVDGTDGVY
                     IFRYQGHQAMFVVTPDGVIATDPIGERRPAAAAYIAEIRKITQAPIKYVVYSHSHYDH
                     IAGGKPFKDLGAVFVAHKNTKSLLEQRKAPDIVIPDLVVDDSGGKLELGGTTLELLYL
                     GKNHGDNSLIMRLPKEKIIFVVDFLPLSGTQFRIMADTYLPDQEETMKKILTMDWDRL
                     IPGHPGAGGRQTGTKDDVKTDLDYMLDLSAAVKKATDEGKCYAGAIAEIKLPKYENLP
                     GYAQNLPLNIERYCDFWNRGI"
     gene            2797..3174
                     /locus_tag="VLJ17_12665"
     CDS             2797..3174
                     /locus_tag="VLJ17_12665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23867.1"
                     /translation="MSALTNRIALVALSLGLQIVVALADAPPVLDVTPSCNAAARGAI
                     SAGRDKEACLSDERAAESELAKNWSKFNQADKTQCVGNVKTGGPASYVELLSCLEIMR
                     DAKEIRDRDLLDQPLMPTVRRRK"
     gene            3349..4167
                     /locus_tag="VLJ17_12670"
     CDS             3349..4167
                     /locus_tag="VLJ17_12670"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008593470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV23868.1"
                     /translation="MAVPEAEAKVAIGARNASKLFLDGAVVAFRQLTLDVRHQEILCI
                     VGPSGCGKTTFLRCIAGLLDLSGGEMLICGKKVAGPPAGVAMVFQHFGLLPWKTVYQN
                     AAFGLAVAGEPAARIGERVRHYLDLVGLTGFEKQYPYQLSGGMQQRVGLVRALAINPS
                     ILLMDEPFAALDAQTRETLQDELLQLMQRPDERKTMVFITHSIDEAILLGDRIVVMTA
                     RPGRIKEVLELPFGRPRDVEAVRADPRFAELRAHIWRQLHTARPRPVAPASEVA"
     gene            4170..5036
                     /locus_tag="VLJ17_12675"
     CDS             4170..5036
                     /locus_tag="VLJ17_12675"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV23869.1"
                     /translation="MTVEVRDPIAVSIATADGLSEDRERAQKVAAGRRRRRQLVEIAI
                     RLGSLAMVLTIWEIFGARIDPVLFTTPSKIAVAAVVMIGSGELWNYLWPSLVVLMLGL
                     SSAAVIGVAVGLLLARFWVLDVALGVYITFLYSTPSVALVPLIVLWAGFETTAKVIIL
                     FLFAFFPMTINTYQGVKNVDPRLIEVGRAFRCSERQLWVNIVLPGALPFIVTGLRLAV
                     GRGLIGMVLADLYTAISGIGYLIVRTASTYQVDKMFVPIVTLGVLGVTLTALLRVLEI
                     KVAPWTAAGQGD"
     gene            5268..>6005
                     /locus_tag="VLJ17_12680"
     CDS             5268..>6005
                     /locus_tag="VLJ17_12680"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV23870.1"
                     /translation="MSHIPKLCAVRCIAIAILLGASLAATHAAAQNAGCVGPMQKINV
                     GVSVSPPNVVHTTIYVAKELGLFAKHCIDANVIQFDGGSSPAASVALSQGNTFATVND
                     YQIGRGMKVKQVWGMAPKAPQAYVVSEVVKTFADLKGKRLSAAGGGVGSFNWRIGREA
                     LSKAGLTIDDAQFISQGTAGRLAGLVAGQIDAVALHPEDAFLAMKQKPGLRILSQVAD
                     LMPLYAFNAYGVSTDVIARDRPFVVNFV"
BASE COUNT         1076 a         1723 c         1912 g         1294 t
ORIGIN      
        1 gtcatcatcg cgatcttcgt catgtgggag atcttggtgc gcgtgtttga catcgagcag
       61 ttcgtactgc cggcgccgac cgcgatcttt gcgtctggct gggaatggcg cgcggatatg
      121 ctcgataatg cgtggcaaac cttcgtgaca acggcggtcg ggtttatctt cgccgtgata
      181 ttcggattgg ttggcggagt tcttttcggt tcttcgacgc tggtttatga cggcttctat
      241 ccggctcttg tcggtttcaa caccatcccc aaggtggcgg tcattccgat cctcgtaatt
      301 tggttcggta tcggcaccgt gccggccatc gtcacggcgt tcctgatctc cttcttccct
      361 attttggtca acgttgcggc gggcattgca acggtagaac cggaacttaa cgacgtattg
      421 cgggcactcg gcgccaagcg atggcagatc gtttataagg tggggctgcc gcgatcgatg
      481 ccatatttct ttgcttcgct gaaagtggcc atcacttttg cgttcgtggg ctcgatcgtc
      541 gccgagaccg tggctgcgaa caaaggcatt ggcaatctga tgctggtggc ttcctcacgt
      601 tttgaggtgc cgctagcctt cgccgggctc ctggtgacga gcatcatggg catcggcatg
      661 tatttggtgg ccgaattcgt agagcggcgc accactggat gggccaggcg tggtgccgat
      721 gccatggggg ttccgcgcgc atgatgagat cgactgacct aacggggctt ttgcgcatgc
      781 tcggtttgcg tttgtaacca agcacgaact attgggtgat ggtcagtgct cgtttagctg
      841 catttgtttc agcagcgcgg caacgatcaa gaggttgttg gcgagcaccg acgcgccggc
      901 gaacaacgcg aagtgctcgg cgccttcggc agggcaacgc ttcatgccgc gtccgcgcat
      961 caacaccggt atggggctcg aagatcgaat agaatttctc ggcattggtg acctgcttcg
     1021 ccattgagca aggctaggtc ttcgcacgcc ggattgtggc ggccgaagac ctggcatttg
     1081 cgcacagttg tgaaggaagc gaacgtcgtg tctatgtgca cacgagcgtc gcggacgccg
     1141 acgttacacc gacgccagcc tcgacctgac aatccgcgac ataatcgcga acgcgcttgc
     1201 aggccgcaat gccatctcgt gcctcgtctt gacgaacaaa acgcgacgga catgttctat
     1261 cccggccaac ttgttggctc gggccacttg gccaattcgc ctgatcttgg cgccggcagg
     1321 gtccggaccg cagcccaatc ccttcggctg cgatccgttg tcacggtacc gctgagatct
     1381 tcagacggtg gacgaagagg ccaaggcctg agtcggcagc gtatcagatc ccccggttcc
     1441 agaagtcgca gtagcgctcg atattgaggg ggaggttctg ggcgtagccc ggaaggttct
     1501 cgtacttggg cagtttgatc tcggcgatcg caccggcata gcatttgccc tcgtcggttg
     1561 ccttcttcac cgcagctgag aggtcgagca tatagtcgag gtcggtcttg acgtcgtcct
     1621 tggtgccggt ctgtcggccg ccggcgccgg ggtgtccggg gatcaggcga tcccaatcca
     1681 tagtcaggat cttcttcatg gtctcttcct gatcgggcag ataagtgtcg gccatgatgc
     1741 ggaactgggt gcccgacaat ggcaggaagt cgacgacgaa aatgattttc tccttcggca
     1801 ggcgcatgat gagagagttg tcgccgtggt tcttgccgag atagagcagt tcgagcgtcg
     1861 taccgccaag ttcgagcttg ccgccactgt cgtcgaccac gaggtccggg atcacgatat
     1921 ccggcgcctt gcgctgctcc aggagcgatt tggtgttctt gtgggcgacg aagacggcgc
     1981 cgagatcctt gaacggcttg ccacctgcaa tatggtcgta atggctgtgg ctataaacca
     2041 catatttgat cggagcctgg gtgatcttgc ggatctctgc gatataggct gccgctgcgg
     2101 gccgccgctc cccgatcgga tcggtggcaa ttacgccgtc gggcgtgacc acgaacatcg
     2161 cctggtggcc ttgatagcgg aaaatgtaga cgccatcggt gccgtcgacc ttggtggtcg
     2221 agaacagcgg cggtggtggc gtcggtgctt gggcgaagac cggtaatgct gtggcggcca
     2281 gaatacccgc aagcaacgca gtggctggac gtgtcatggt tttctccctc gttcactcga
     2341 taaaatcgct tgggcgctgg attcgatcat cgcgcttcca tgcgaggcga tcgcccatca
     2401 gcccagtcgg gctgaggtgg tccaaatcgc ctgaaagcgg tctagcatgc cgcgcctttg
     2461 agcgtcatcc ggggaatggg ggcgatctgg catgctcgga atcagcgacc tagagctcgt
     2521 ttcggtgaaa tgactccggt attgagcttg ccaattctcg tgtcattcaa gcgaaagtgg
     2581 gaatgccgta ctccgcagca tcgcccgggt tactgggtcg gccgctttcg cgggcgatga
     2641 cacgcctgtg taattccgcc agaacgagat cctgattgtg gtctgtgcga cggccggaat
     2701 aatcctgtat gatcatctcg catgtcacta agagacgtcg tatatcgtga aacgacgaac
     2761 gggaatcgcc tgaggcagtc cacacacgag gaaaccatgt cagctctcac caacaggatc
     2821 gcgcttgtcg ccctatcgct cgggctgcag atcgttgttg cacttgccga cgcaccgcca
     2881 gtgctggacg tgacgccaag ctgcaacgca gcggcccgcg gagccatttc ggctgggcgg
     2941 gacaaggagg cctgcttatc ggacgaacgg gccgctgaaa gtgagctcgc aaaaaattgg
     3001 tcgaagttca atcaggccga caagacccag tgcgtcggga atgtgaagac cggtggaccg
     3061 gcaagctatg tggagctgtt gtcctgtctg gagatcatgc gggacgcgaa agaaattcgc
     3121 gaccgcgacc tactagacca gccgctgatg ccgaccgttc gccgccgtaa gtgaactgac
     3181 gcgggcgcgt cgaaacgcca cgcaaatcct tgcgccgccg gtagccggca tcgggctgcc
     3241 gcgatattat ttacaaggtg gcttgacggg acctgatcgg ggtcgccgag ggctcggcgc
     3301 ttcggacgtc gtgctggagc gcgacaacgc acgaaggaca tgatccgcat ggcggttccg
     3361 gaggcggaag ccaaggttgc gatcggtgcg cgcaacgcca gcaagctgtt cttggacggc
     3421 gcggtggtgg cattccgcca gcttaccctc gacgttcgcc atcaggaaat cctgtgcatc
     3481 gttggaccga gcggctgcgg caagacgacc ttcctgcgct gcatcgcagg ccttctcgat
     3541 ctgagcggcg gcgagatgct gatctgcggc aagaaggtag ccggcccacc agccggcgtc
     3601 gccatggtgt tccagcattt cgggctgctg ccgtggaaga ccgtctatca gaacgcggca
     3661 ttcgggcttg ctgtggcagg cgagccggca gcccgtatcg gcgagcgtgt gcggcactat
     3721 ctcgaccttg tcggccttac gggtttcgag aagcaatatc cctatcaact ttcgggcggc
     3781 atgcagcagc gtgtcggtct ggtgcgggcg ctcgccataa atccgtcgat tcttctcatg
     3841 gatgagccgt tcgcggcgct cgacgcccaa actcgcgaaa cccttcaaga cgaattgctg
     3901 caactcatgc agcggcccga tgagcgcaaa acgatggtgt tcattaccca ctcgatcgat
     3961 gaggcgatcc tgctcggcga ccgcatcgtc gtgatgacgg cgcggcctgg ccgcatcaag
     4021 gaggtgctgg agcttccgtt cgggcgccca cgtgacgttg aggcggtgcg cgccgatccc
     4081 cggtttgccg aattgcgtgc ccatatctgg cggcaattgc atacggcacg gccgaggccc
     4141 gtcgcgcccg caagcgaggt ggcctgacca tgacggttga agtccgggat ccgattgcgg
     4201 tttcgatcgc aacggccgat ggccttagcg aggaccgcga acgcgcccaa aaggttgcgg
     4261 ccggacgacg gcgacgccgc cagctcgtgg aaatcgcgat ccggttgggt tcgcttgcga
     4321 tggtgctgac gatctgggag atttttgggg cccggattga tccggtgctg ttcacgacgc
     4381 cgagtaagat cgcagtggcg gccgtcgtca tgattggcag cggcgaatta tggaactacc
     4441 tttggccgag cctcgtggtg ctgatgcttg gcttgagttc ggcggcggtc atcggtgttg
     4501 cggtcggcct gctgctggcg cggttttggg tcctcgatgt ggcgctcggc gtctacatta
     4561 cgttccttta ctccacgccg agcgtcgcac tggtcccctt gatcgtgctg tgggcaggct
     4621 tcgagaccac cgccaaggtg atcatcctgt tcctgtttgc gtttttcccc atgaccatca
     4681 acacctatca gggagtgaag aatgtcgacc cgcgactgat cgaggtcgga cgcgcgttcc
     4741 gctgtagcga acgccagctc tgggtcaaca tcgtgctgcc gggcgcgttg ccgttcatcg
     4801 tcacgggctt gcggctcgcc gtcggtcggg gcttgatcgg catggtgctt gccgaccttt
     4861 acacggcgat ctcgggcatc ggctatctga tcgtgcggac cgcctcgacc tatcaggtcg
     4921 acaagatgtt cgtgccgatc gtgacgctcg gcgtcctggg cgtcacactg acggcgctac
     4981 taagagtgct ggagatcaag gtggcgccat ggacggcggc cggccaaggg gattaggcta
     5041 tggaacgcgc ctgggcctgt agggtgggca aaggcgcggg gcacggcatt ggagggaacc
     5101 tgcggccttt ctcgccctgc ctatgctgtc agtcgcagtc cctcggcggg cgcggcggta
     5161 ccgagacttt ggctgcgctc gtcgtttcgg accgcctttg cccacccttg tattagcggt
     5221 gtcgttgccg cgagcataat cacaacaaag ttgcggtgag gaaagccatg tcgcatatcc
     5281 ccaaactctg cgccgtacgt tgcatcgcaa tcgcgatttt gctgggcgca agcttggcgg
     5341 cgacccacgc cgccgcgcaa aatgccggct gcgtcgggcc aatgcaaaag atcaacgtcg
     5401 gcgtctcggt gtcgccccca aatgtggttc acaccacgat ttacgtcgcc aaggaactcg
     5461 gcctctttgc caagcactgc atagacgcca atgtcatcca gttcgacggc ggatcctcgc
     5521 cagcggcgtc ggtggcgctt tctcagggca acacctttgc gaccgtgaat gattaccaga
     5581 tcggtcgcgg catgaaggtc aagcaggtgt ggggcatggc tccgaaagcc ccacaggcct
     5641 acgtggtgtc ggaagtcgtc aagacctttg cggacctcaa gggtaagcgg ctttccgccg
     5701 ccggcggcgg tgtgggcagc ttcaattggc gcatcggccg cgaggccttg agcaaagctg
     5761 gcctcactat cgacgatgcc caattcattt cgcagggcac cgccggtcgc ctggccggat
     5821 tggtggccgg gcagatcgat gcggtcgcgc tccatccgga agatgcgttc ctcgccatga
     5881 aacagaagcc cggactgagg attctcagcc aggttgccga tctcatgccg ctctacgcct
     5941 tcaatgccta tggggtatcc accgacgtaa tcgcacggga ccggcccttc gtggtgaatt
     6001 tcgtc
//
LOCUS       DATILV010000547         2335 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2688472, whole genome shotgun sequence.
ACCESSION   DATILV010000547 DATILV010000000
VERSION     DATILV010000547.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2335)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2335)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2335
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2688472"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..425)
                     /gene="coaE"
                     /locus_tag="VLJ17_12685"
     CDS             complement(<1..425)
                     /gene="coaE"
                     /locus_tag="VLJ17_12685"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008133574.1"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HSV23871.1"
                     /translation="MFILGLTGSLGMGKSTTTKFFAEAGVPVHDADAVVHRLYEAEAV
                     PLIETAFPGTTAGGKVDRDKLAQRVLNDTAAIEKLEAIVHPLVRSSEKRFLADAERNG
                     AAVAVLDIPLLFETGGEKRCDAVVVVSAPAAVQRARVLAR"
     gene            complement(429..1037)
                     /locus_tag="VLJ17_12690"
     CDS             complement(429..1037)
                     /locus_tag="VLJ17_12690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011923454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family protein"
                     /protein_id="HSV23872.1"
                     /translation="MALWLAPQPLVLASRSDVRGKILAAAGLRFEIRPSQIDERAVEA
                     KAGVTDAAAIARHLARAKADKIAASLPGRVVLGADQTLARGAMRFGKPTSRAEAAEQL
                     RALRGRTHELHSALALVRDSEALFACVSTARLTMRNFSDQFLNEYLDLAADAAMSSVG
                     GYQLEGIGIHLFERVDGDYFTILGLPLLPLLAFLRQNKLVDG"
     gene            complement(1041..1874)
                     /locus_tag="VLJ17_12695"
     CDS             complement(1041..1874)
                     /locus_tag="VLJ17_12695"
                     /EC_number="2.7.11.33"
                     /EC_number="2.7.4.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, water dikinase regulatory protein"
                     /protein_id="HSV23873.1"
                     /translation="MPGTGYFHLHLVSDATGETLITVARAAAAQYANVSPVEHLYPMV
                     RSKKQLDNALAEITESPGLVLYTLLEEDLIQTLEQKCRELGLPCMSVLGPVLRLFQSY
                     LGAETIHRAGAQHVLNAEYFQRIDALNFTMLHDDGQHVEGLEDADVVLVGVSRTSKTP
                     TSIYLANRGVKTGNVPLVPGVPLAAPVENLARPLVVGLYASPERIVQIRENRLLGLKA
                     HRDDDQYIDKTAVAEEVSFSRRLCAKHNWPTIDVTRRSIEETAAAVMRLLSERRRQPV
                     T"
     gene            2156..>2335
                     /locus_tag="VLJ17_12700"
     CDS             2156..>2335
                     /locus_tag="VLJ17_12700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23874.1"
                     /translation="MLIDRHESNQRSNNHHRFFRRVFMEEVGLAPTVGKKLLHVLAGK
                     HEPVPPVWLMRQAGRY"
BASE COUNT          509 a          654 c          698 g          474 t
ORIGIN      
        1 cgcgcaagaa cgcgcgcgcg ctggacagcg gccggcgccg aaaccacgac caccgcgtcg
       61 cagcgttttt caccaccagt ctcgaacagc aacgggatgt cgagcacggc tacggcagcg
      121 ccgttgcgtt ccgcgtcagc gagaaagcgt ttttcggacg agcgcaccag cggatgcacg
      181 atggcttcaa gcttctcgat tgcggcggtg tcgttaagta cccgttgagc gagcttgtcg
      241 cggtcgacct tgccgccggc ggtagtgccc ggaaatgccg tttcgatcag cggcaccgct
      301 tcggcctcat agaggcggtg cacaaccgca tcagcgtcgt gaaccggtac tcccgcctcg
      361 gcgaagaact tcgtcgtggt cgatttgccc atgccgagcg agccggtgag accgagaatg
      421 aacattggct agccgtcgac aagcttgttt tgccgcagaa aggcaagcag gggcaaaagc
      481 ggcagtccga ggatggtgaa atagtcgcca tcaacccgct cgaacaaatg aatcccgatg
      541 ccctcaagct gatacccgcc gacgctgctc attgcggcgt ctgcggccaa atcaagatat
      601 tcattgagga attggtccga aaaattgcgc atggtcagtc gtgctgtgct cacgcacgcg
      661 aacagcgcct cgctgtcccg tacgagcgca agcgccgaat gcagttcatg ggtccggccc
      721 cgcagtgcac gcagctgttc agcggcttcg gcgcggctgg tcggcttgcc aaagcgcatc
      781 gcgccacgtg cgagtgtttg atcggcacca agtaccaccc tgcccggcag tgaggccgcg
      841 atcttatccg ctttggcgcg cgctaaatgg cgggctatcg ctgccgcgtc tgtaacgccc
      901 gccttggcct cgacggcgcg ctcatcgatc tgtgagggcc ttatctcaaa tcgcagccca
      961 gctgccgcaa gaattttacc gcggacgtcg cttctggagg cgagcaccaa cggctggggg
     1021 gcaagccaga gcgccatggg tcaggttacc ggttgacggc gccgttcact caataaccgc
     1081 atgaccgccg cggcggtttc ctcaattgaa cggcgcgtca cgtcgatcgt cggccaatta
     1141 tgtttggcgc agagccggcg ggaaaaagag acttcctcgg ccacggcagt cttgtcgata
     1201 tattgatcat cgtcgcgatg ggctttgaga ccgagcagcc ggttctcgcg gatttggacg
     1261 atgcgttcgg gactggcgta taggccgacc accaaggggc gtgcgaggtt ctcgaccggt
     1321 gcggctaacg gcacgccagg taccaacggc acgttacccg tcttgacccc acggttcgcg
     1381 aggtaaatcg atgtcggcgt tttcgaagtg cgtgagaccc cgaccagcac cacgtcggca
     1441 tcttcaagac cttcaacatg ctggccgtcg tcatgcagca tcgtgaaatt gagtgcgtcg
     1501 atacgttgaa aatactcggc attgaggacg tgctgggcgc cggcgcgatg aatagtttct
     1561 gcgccaagat atgattggaa cagcctcagg accggcccaa gtaccgacat acagggcaag
     1621 ccgagctccc ggcacttttg ctccagcgtc tggatcaagt cctcctcaag taacgtatac
     1681 aggacgagtc cgggcgattc agtgatttcc gcgagcgcat tgtcgagctg ctttttcgag
     1741 cgcaccatcg gataaaggtg ctcgaccggc gaaacattgg cgtattgcgc cgcggctgcc
     1801 cgcgcgactg taatcaaggt ttcaccggtg gcgtcggata ccagatgaag atgaaaataa
     1861 ccggttccag gcatctgtat agcggccaga caacgtgtgg ataggacggg aggaggccac
     1921 gccttaacgt gacaagcaag ctgctgatgc tcacgagttc aatatccatc cacaccactg
     1981 ccgatgggat gactgtgaaa cgccaacgag tttagatcat ggtgatgtgg atggtcctat
     2041 ggggacgaat caggataggc ctacaaaagc cacataaaat cgcattttcg ctgtggatag
     2101 cacattgctg gattaggctc gattctgaat tggttcaagc tgttcagtgg atacaatgtt
     2161 gattgatagg catgagtcta atcaacgctc taataaccac cacagattct ttagaagagt
     2221 atttatggaa gaagttggat tagcaccgac agtggggaaa aagttgttgc acgtacttgc
     2281 aggcaagcat gaacctgtac cgcctgtctg gttgatgcgg caggcagggc gctat
//
LOCUS       DATILV010000548         1609 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1410031, whole genome shotgun sequence.
ACCESSION   DATILV010000548 DATILV010000000
VERSION     DATILV010000548.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1609)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1609)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1609
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1410031"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..801
                     /locus_tag="VLJ17_12705"
     CDS             <1..801
                     /locus_tag="VLJ17_12705"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HSV23875.1"
                     /translation="LVEGRFFTEDDENGKLPVAIIDEATARRYWWPDHDPVGRRLRIR
                     LRFGQNPVNPWSTVVGVVNNIKHDGLDVDGVPHLYVPLNQFVGRSLSLALRTSLPAST
                     LEARIRGAIQSVDPGLPVFSVTSMDEVVDASLASRRFSADLVAGFAGMALLLASIGIY
                     GLLAYMVGQRSREIGLRMALGAGRGDVLKLILQKGVALAIAGIVAGLIAAALSASFMA
                     SLLYGVRPRDPGVFTLVPLLLLVVAIAASCRPAWRATKVDPIVALREV"
     gene            1203..1502
                     /locus_tag="VLJ17_12710"
     CDS             1203..1502
                     /locus_tag="VLJ17_12710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23876.1"
                     /translation="MPPDPETHAAIGLVPAARMKRLLGAASIFTLVMSVPQALTIWVT
                     HQAAGVSLISWSAYLVSAVLWLGYGLRKHDRNIYLPCLGWIAVDAAVILGVLVNG"
BASE COUNT          279 a          447 c          533 g          350 t
ORIGIN      
        1 ctcgtggagg ggcgcttctt caccgaggac gatgaaaatg gcaagttgcc cgtggcgatc
       61 atcgatgagg cgacggcaag gcgctactgg tggccggatc atgatccggt gggccggcgg
      121 ctgcgtatcc ggttgcgttt cggacagaat cctgtgaatc catggagcac cgtggtaggc
      181 gtggtgaata atatcaaaca cgacgggctc gatgtcgatg gcgtgccgca cctctatgtt
      241 ccgttgaatc aatttgtcgg gcggtcgttg agcttggcgc tgcgaacttc tttgccggcg
      301 agcacgctcg aggcgcggat tcgcggcgcg attcagagcg tagatccggg gctgccggtg
      361 ttcagcgtca cgtcgatgga tgaggtggtg gatgcatcgc tggcatcgcg cagattttcg
      421 gcagatttgg tggctggatt tgccggaatg gcgctgctct tggcttcgat cgggatatat
      481 ggattgctgg cgtacatggt gggccagcga tcgcgcgaaa ttggattgcg aatggcgttg
      541 ggagcgggcc gcggagatgt gctgaagctg attctgcaga agggcgtggc gctcgccata
      601 gcagggattg ttgcgggtct gattgcagca gcgttgagcg cctcgttcat ggcgagcctc
      661 ctctatggcg tacggccacg ggatccaggc gtgttcacgc tcgtgccgct gttgctgctc
      721 gtggtggcga ttgccgccag ctgcagaccg gcttggcgag cgacgaaggt ggatccgatt
      781 gtggcgctgc gagaggtttg aggtagcacg attcaggggt cacgattcag gggtcacagg
      841 ggtcagtcct gaaaccctgc gctatttgga aacgcgcagt tgcttgacga tcgtctccag
      901 gcctcgccgg gcccgcttgt ccccttggag tctctgttcc aataggccca cttcccgcac
      961 ggtcgccgat tcgtcccggt ggaagaaacc ggcttggggt cagtctttca aaatggtatt
     1021 tcgatcggga atcaatcgcg attcgcaaat aaccccatac cgaaagactg accccaatcc
     1081 ttcctctcac caccatcgtc gctgaaaggc gcacccacgt cttcatgtaa cctgacccca
     1141 atccctttcc ttctcccggt tgggaatcag gggagaattg aggccgcgac aggaggtgcc
     1201 cgatgccccc ggacccggag acgcatgcgg cgatcggcct ggttccggca gcgagaatga
     1261 aacgcctgct gggagctgcc tcgatcttca ccctggtaat gagtgtcccg caggcgctga
     1321 ccatctgggt cacccaccag gcggccggag tctcgttgat ctcgtggagc gcctatctcg
     1381 tgtccgctgt tctctggctc gggtacggcc tgcggaaaca cgaccgcaac atctacctgc
     1441 cctgtctcgg ctggatcgcc gtagatgccg ccgtgatcct cggcgttctg gtcaacggct
     1501 aagggacgat cgcagttccc tcactcgcat tgccgatcgg gcgagtcggg ggggactcgg
     1561 ggtcgtcctg aaatgctgag ggcgagggct aaccgctgca gcggaaggt
//
LOCUS       DATILV010000549         2601 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3451568, whole genome shotgun sequence.
ACCESSION   DATILV010000549 DATILV010000000
VERSION     DATILV010000549.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2601
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3451568"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(76..744)
                     /locus_tag="VLJ17_12715"
     CDS             complement(76..744)
                     /locus_tag="VLJ17_12715"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HSV23877.1"
                     /translation="MIELKDKLGCAAVALMVAAALSASMAAAPAWAGDIVAEWATVKP
                     PPVPELKPVTIDPKTTALLILDLMKTNCGERPRCTAMVPNVRKLHDAARAANMMVFYT
                     LVGPPGATPADMVPGITPRDGEWVYQRGPDKYLGSDLEKRLKDKGIKTVIITGTSAQG
                     VVIGTGSGSAQRGYKVIVPVDGMASEDPYMEQYAAWHMYKGGPAIITEHVTVTRSDMI
                     KFAD"
     gene            946..1737
                     /locus_tag="VLJ17_12720"
     CDS             946..1737
                     /locus_tag="VLJ17_12720"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HSV23878.1"
                     /translation="MKTSRLSIAICGAVLAIAFQAGAARAELKKLWIDYKDGDKPLYG
                     YLVYDDAVSGKRPGVLLAHSRAGMSEATLRDSDMIAKMGYVVFAADIFGKGVLPKEVP
                     EMQALTAIYNQDRPLMRKRAAAGFDVLKASPLVDATKLAVIGYCFGGTVAVELAETGI
                     PIVGMISVHGSFRNFTPEAAKNIKGRVLILHGAEDPVAPLTEVSALIDQLRAAKIDFE
                     LQLFSGTQHAFTNPQNPAEERADREYKVATPRFLREVFGTETASK"
     gene            complement(1898..>2601)
                     /locus_tag="VLJ17_12725"
     CDS             complement(1898..>2601)
                     /locus_tag="VLJ17_12725"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSV23879.1"
                     /translation="LGHIGYAVVPWKRGRGYAKRALALMLIEARDKGLTFVHVTAQAD
                     NAASQAVIRANGGHLVERFREPTAHGGRESLRFRIDLPVEADPIVLRQARREDFAFCR
                     RVTHETMRRIIERLFGWDEAQQVAKFADQWRLDETRIITCRGEDAGWLQTRPAEDAVF
                     LCQLYLDTPFHRRGIGTRVMQIVIDEAQCDGKAVTLDVVKINPARRLYERLGFQTTGE
                     EEHKFHMRREPNVVT"
BASE COUNT          505 a          807 c          770 g          519 t
ORIGIN      
        1 caaccggacg ttccaaatct gtttttcgct tcttcttgtt gttctaaacc gtccctccga
       61 cgtcaccgcg gatgtctaat ccgcaaactt gatcatgtcg ctgcgcgtga ccgtcacgtg
      121 ctccgtaata atggcagggc cgcctttgta catgtgccag gccgcgtatt gctccatata
      181 ggggtcttcc gacgccatcc cgtcgaccgg gacgatgacc ttatatccgc gttgtgctga
      241 gccagagcca gtaccgatca ccacgccctg agcggaggtg ccggtgatga tcacggtctt
      301 aatgccttta tccttcagcc gtttctcgag atcggagccg aggtatttgt cgggtccgcg
      361 ctgatagacc cattcgccgt cgcgcggtgt tattcccggg accatgtcgg caggcgtcgc
      421 cccgggtggg ccgaccagcg tgtagaacac catcatgttg gcggcacggg cggcgtcatg
      481 cagcttcctg acgttaggca ccatggcggt gcaacgcggg cgctcgccgc agttcgtctt
      541 catcaggtcg aggatcaaca gcgccgtcgt cttgggatcg atcgtcacgg gcttgagttc
      601 cggcaccggc ggcggcttca cggtcgccca ttcggcaacg atgtcacctg cccatgccgg
      661 cgcagccgcc atcgaggcgg acagggctgc cgcaaccatc aaggccacgg cggcgcaacc
      721 aagcttgtcc ttcaattcaa tcatgacggc ttcctccgat cgcaacgatt caggcggatt
      781 agagcatatg cgaacgcagc cggcatctgc acacgagaaa atgcgacgaa aatatttttc
      841 cgccagatca acctggacct attccacaac tgtgagccca ggagaccatc tggactttgc
      901 cgttccggtg ggcaaagctc atacaaataa acttgggagg atccgatgaa aacctcacgt
      961 ctatcgatcg ccatttgcgg tgccgtactc gcgattgcgt tccaggcggg cgccgcgcgc
     1021 gccgaactca agaagctttg gatcgactac aaggacggtg acaagcctct ctacggctat
     1081 ctcgtctatg acgacgctgt ctcgggcaag cgcccaggcg tactgctggc gcacagtcgt
     1141 gccggcatgt cggaagcgac ccttcgggat tccgacatga tcgcgaagat gggctacgtg
     1201 gtgttcgccg cagacatctt cggcaagggc gtcctgccca aggaggttcc ggagatgcaa
     1261 gcgctgactg ccatctacaa ccaagaccgt ccgctgatgc gcaagcgcgc cgcggcgggc
     1321 ttcgatgtgc tcaaggctag cccgctggtc gatgcgacca agctcgcggt gatcggctac
     1381 tgcttcggcg gcacggtggc ggttgagctg gcggagaccg gcattccgat cgtcggcatg
     1441 atctcggtgc atgggtcgtt ccgcaacttc acgccggaag ccgccaagaa catcaagggc
     1501 cgtgtgctca tcctccacgg cgccgaagat ccggttgcgc cgctcaccga ggtcagcgcc
     1561 ctcatcgacc aactgcgggc cgccaagatc gacttcgaac ttcagctttt cagcggtacc
     1621 cagcacgcct tcaccaatcc gcaaaatccg gccgaggagc gcgccgatcg tgaatacaag
     1681 gtggcaacgc cgcggttctt gagggaagtg ttcgggacag agaccgcgtc caagtaggat
     1741 ggttgagcgc aagcgaaaac ccatcaaggt gccgcgcggc gcgacccatg atgggtttcg
     1801 cagaaagctc agtccattct acgcgacgat gagaccatgc aacgcgatcc gaaattttga
     1861 tacattagcc aggcttcgag cgaaccttgc gcagctgtca tgtgacgaca ttgggttccc
     1921 gccgcatgtg aaatttgtgt tcttcctcgc ccgttgtttg gaagcctaac cgttcataga
     1981 ggcgtcgtgc tggattgatc ttcacaacgt caagggtgac ggccttgccg tcgcattgtg
     2041 cttcatcgat gacgatctgc atcacccggg tgccgattcc gcggcggtga aacggggtgt
     2101 ccagatagag ctggcagaga aaaacagcgt cctcggcagg tctggtctgt agccagccgg
     2161 cgtcttcacc acgacacgtg atgatgcggg tctcatcgag acgccactgg tcagcgaatt
     2221 ttgcgacctg ctgcgcctcg tcccagccga ataaccgctc gatgatccgg cgcatcgtct
     2281 cgtgggtgac gcggcggcag aaggcaaaat cctcccggcg cgcctgacgc agcacgatgg
     2341 ggtccgcctc gaccggcaga tcgatgcgga accgcaatga ctcccttccg ccatgggcgg
     2401 taggctcacg aaagcgttcc accagatgtc cgccattcgc ccggattacg gcctgcgagg
     2461 ccgcgttgtc cgcttgagcg gtcacgtgga cgaatgtcag ccctttgtcc cgggcctcga
     2521 tcagcatgag cgccaaggcg cgcttggcgt agccgcggcc gcgcttccac ggcaccaccg
     2581 catagccgat gtggcccagc a
//
LOCUS       DATILV010000550         3812 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4217514, whole genome shotgun sequence.
ACCESSION   DATILV010000550 DATILV010000000
VERSION     DATILV010000550.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3812)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3812)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3812
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4217514"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1534)
                     /locus_tag="VLJ17_12730"
     CDS             complement(<1..1534)
                     /locus_tag="VLJ17_12730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020173561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSV23880.1"
                     /translation="MGIVRFALRWPYTFYVLALLILFLGVTAFRSMPTDIFPEIDIPV
                     VTVIWQYTGLSTPEMEQRVTTYSEYAMSTAVSGIKDIEAQTLDGISVQKIYFQPDVSI
                     DLAIAQIINATNYIRLLMPPGIQSPLVVEYNASSVPVLQISLSSDTLSEQQLYDYGLY
                     SLRQRLAPIHGVTFPTPAGGKYRQIMVDLDPAKLLAKGLTPLDVANAVNAQNLTLPSG
                     TAKIGDTQYTVRTNAVPATIDDLNNIPVKYANGATIFVKDLGYVRDGSLVQQNVVRSD
                     GRRSVLLSVIKNGNASTVDVVREVKKALKVARASAPPGMEIKELFDQSVFVSASVDAV
                     LREGAIAAGLTALMILLFLGSWRSTLVVMISIPLSVLSSLIVLYFLGDTLNTMTLGGL
                     ALAIGILVDDSTVTIENTHRLLTEEGQPLPQATLHGAAGIAVPTLVSTLAISCVFTSV
                     VFLEGPAKYLFTPLGLAVVFAMLASYGLSRTLTPITIGLLLKGEQHGAEGGWFARLHH
                     HLE"
     gene            complement(1807..1974)
                     /locus_tag="VLJ17_12735"
     CDS             complement(1807..1974)
                     /locus_tag="VLJ17_12735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23881.1"
                     /translation="MQTTSMQTPVRRDGTLLRTARAVGRWFSRAVNAIGQPYAKPEAD
                     HWADWPHFPPF"
     gene            complement(1980..2219)
                     /locus_tag="VLJ17_12740"
     CDS             complement(1980..2219)
                     /locus_tag="VLJ17_12740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23882.1"
                     /translation="MTTIALSKARGTLRPVRRGEALEGLSDASQWLLDTLRGWRRRSR
                     GHHRFARARRAHMPRDIGITRADALYPSSNPFRKE"
     gene            complement(2682..3083)
                     /locus_tag="VLJ17_12745"
     CDS             complement(2682..3083)
                     /locus_tag="VLJ17_12745"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HSV23883.1"
                     /translation="MAKTIAESNKTLVLEAFDTLFNKRDYKAAERYWSSIYIQHSAHI
                     PPGGDGLFNLIRSTPATLKYEPGVIVAENDYVIVHGRFLGTARRRNWITADVVRVNDG
                     VLAEHWDVLQDEATEAESQSGLPMFGTRFPG"
     gene            complement(3188..3589)
                     /locus_tag="VLJ17_12750"
     CDS             complement(3188..3589)
                     /locus_tag="VLJ17_12750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007629940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF427 domain-containing protein"
                     /protein_id="HSV23884.1"
                     /translation="MEQTLSTTSKPIKFPGPDHPITIECNPNRVVISVAGHVIADTRD
                     ALTLREATYPPVQYVPRKDVDLALLERTDHATYCPYKGDCGYFSIPVGGKRSINAAWT
                     YEEPYAAVAAIKDHLAFYPDRVDAIEERRGD"
     gene            complement(3627..>3812)
                     /locus_tag="VLJ17_12755"
     CDS             complement(3627..>3812)
                     /locus_tag="VLJ17_12755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV23885.1"
                     /translation="LVVNGGNDVIIYSVNSFILQQHLPDAQLIFYPDANHGSQYQYPD
                     LFVRHVSLFLSEGDHAA"
BASE COUNT          725 a         1115 c         1171 g          801 t
ORIGIN      
        1 gttcgaggtg atggtggagc cgcgcgaacc agcctccttc ggctccgtgc tgctcgccct
       61 tcaacagcag gccgatggtg atcggcgtca acgtgcggga aagtccgtag gacgccagca
      121 tcgcgaacac gacggcgagg cctagcgggg tgaacagata tttcgccggg ccttcgagaa
      181 agacgaccga cgtgaataca cagctgatcg ccaatgtcga taccagggtc ggcacggcaa
      241 tgccggcggc gccgtgcaaa gttgcctgcg gcagcggctg tccctcctcg gtcaacaggc
      301 gatgcgtgtt ctcgatcgtc accgtcgagt catcgaccag gatgccgatc gccagcgcca
      361 atccgcccaa tgtcatcgtg ttgagcgtat cgccgagaaa atagagcacg atcagcgatg
      421 acagaacgga tagcgggatc gagatcatga ccaccagggt cgagcgccag gagccgagga
      481 ataagaggat catcagcgcc gtcagcccgg ccgcgatggc gccctcgcgc agcaccgcgt
      541 cgaccgaggc gctgacgaac accgactggt cgaacagttc cttgatctcc atgccgggcg
      601 gggccgaggc gcgggcgacc ttcagcgcct ttttgacctc cctgacgaca tcgacggtcg
      661 aagcattgcc gttcttaatg acgctcagca agaccgagcg ccgcccatcc gatcgcacga
      721 cgttctgctg caccagcgag ccgtcgcgga catagccgag atccttgaca aaaatcgtgg
      781 cgccgttggc gtatttgact gggatgttgt tgaggtcgtc gatcgtcgcc ggtaccgcat
      841 tggtgcgtac cgtgtactgg gtgtcaccta tcttcgccgt accggagggc aaggtcaggt
      901 tctgggcgtt gacggcgttc gctacatcga gcggcgtgag gcccttggcc agcagttttg
      961 ccgggtcgag atcgaccatg atctggcggt atttgccgcc cgccggcgtc ggaaaggtga
     1021 cgccgtggat cggcgccagc cgttgcctca gactgtagag cccgtaatca tagagctgtt
     1081 gctcgctgag ggtgtccgag ctgagactta tctgcagcac cgggacgctg gaggcgttat
     1141 attccacgac gagcggcgac tgaattccgg gcggcatcag cagccggata taattggtcg
     1201 cgttgatgat ctgcgcgatt gcgagatcga tactgacgtc cggctgaaaa tagatcttct
     1261 ggacggagat gccgtccagc gtttgcgcct cgatatcctt gatcccactg acggcagtgc
     1321 tcatcgcgta ttcgctgtag gtcgtaacac gttgctccat ctccggcgtg ctaagaccgg
     1381 tgtactgcca aatgacagtg acgaccggga tatcgatctc gggaaaaatg tccgtcggca
     1441 tcgaccggaa ggcggtgacg ccgagaaaca ggatcagcag ggccaatacg taaaaggtgt
     1501 aaggccagcg cagcgcaaag cgcacgatcc ccatgacaag ctccgtttgc tataggctat
     1561 tgggctgccg gtccgcacct ggttgacgga aactcctacc tgtcgcggcg cggcacgatc
     1621 agattggcga cgggaacctg cacggcctcg acgttttggt tcagcggtcg tcgaccgcac
     1681 attgatcagc ccctggttag ggcgcgactt tgacgggtag gtcgtcgtag ccggtcatcg
     1741 tttgatcctt tgtcattttc actgggtttc cggcttcgcg ggtacgattg atttgataga
     1801 caccgctcag aatggcggga agtgcggcca gtccgcccaa tggtcggctt cgggcttcgc
     1861 gtagggctgc ccgatcgcgt tgaccgcccg tgaaaaccat ctgccgacag cccgcgccgt
     1921 gcggagcaag gttccatcgc ggcgcactgg ggtctgcatc gatgtcgtct gcatgtggat
     1981 cactccttcc gaaacggatt gctgctcgga tagagcgcgt cggcgcgggt gatcccgatg
     2041 tcgcgcggca tatgcgctcg tcgagccctg gcgaaccggt gatgcccgcg gctccgccgc
     2101 cgccatccgc gtaacgtatc gagaagccat tggcttgcat cgctgagccc ctccagagct
     2161 tcgccacgcc ggactggccg cagggtgccg cgagcctttg ataacgcgat tgtggtcatt
     2221 tgagctattc tcagctctcg cgagcgctaa tgctcgaaat ggtgattatg gcgtgggcca
     2281 acaaacgaga ctttggggcc gtcgatttag gattcctcat gcctggaagt gcccaaccgc
     2341 agcctttgaa cgcggcacgg gcgttcgagg cgacgctcgc gccgctagcg gcgcaccgtc
     2401 ctcaaacagg tggcgacggc ggaattcagc ccacccatcg cgacaactcc agtgcgaccc
     2461 taatcgcgtc ctgcctatat tgaagccagc agcccggcca tgtgacgctg tatcaacggc
     2521 acggcttcga agtccgtggg caccatgcaa atgggatcac cactacccct cgtttcgatg
     2581 ctggtctgga cgtaacgctg cagcacgttg attaccggtc tcacgggaaa tcgcgccgca
     2641 aacaatggcc gtctgaaatt gccgcagcga actagctttt ctcaacccgg aaacctggtc
     2701 ccgaacatcg gcagaccgct ttgcgactcg gcttcggtgg cttcgtcctg cagaacatcc
     2761 cagtgttctg ccagcacgcc gtcgttcact cggacaacat ctgcggtgat ccaatttctc
     2821 cgccttgcag ttcccaaaaa ccgaccatgg acgatcacgt aatcgttttc agcgacgatc
     2881 acacccggct cgtacttcag cgtcgccggt gtgcttctaa tcagattgaa caggccgtcg
     2941 cccccgggcg ggatgtgtgc gctgtgctga atgtagatcg atgaccagta ccgctcggcg
     3001 gccttatagt cccgcttgtt gaaaagcgta tcgaacgctt cgaggaccaa tgttttgttc
     3061 gattctgcga ttgtctttgc cattttgtgc acttccattt ttgcatggtt gtttcggacg
     3121 gatttgcggt catggcgtta atcggacacg gccgtcggcg tgccggcgca ccctaagcca
     3181 ggtcttgcta gtctccgcgc cgttcttcga tcgcgtcgac gcgatcgggg taaaaggcga
     3241 gatgatcttt gatggcggcc acggccgcgt atggttcctc gtaggtccac gcggcattga
     3301 tcgagcgctt gccgcccacc gggatgctga aatatccgca gtcgcccttg taggggcagt
     3361 aggttgcgtg atccgttcgc tcgagtagtg ccaggtcgac atccttccgg ggaacgtatt
     3421 ggaccggcgg gtaggtcgcc tctcggagcg tcaaggcgtc tcgggtgtct gcgatcacat
     3481 gcccggcaac cgagatcacg acccggttcg ggttgcattc gatcgtgatc ggatgatccg
     3541 gccccggaaa cttgatgggc ttcgatgtcg tcgagagtgt ctgttccatg gctttacctt
     3601 tctcgagtgc gctgatggtg tacccgtcac gcggcgtggt caccttccga taggaacagc
     3661 gacacgtggc ggacaaagag atcgggatac tggtattgcg agccgtgatt ggcgtcggga
     3721 tagaagataa gctgagcatc cggcaggtgc tgctgcagga tgaacgagtt cacggagtag
     3781 atgatcacgt cattgccgcc gttcacgacc ag
//
LOCUS       DATILV010000551         7017 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2175324, whole genome shotgun sequence.
ACCESSION   DATILV010000551 DATILV010000000
VERSION     DATILV010000551.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7017
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2175324"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..627)
                     /locus_tag="VLJ17_12760"
     CDS             complement(<1..627)
                     /locus_tag="VLJ17_12760"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSV23886.1"
                     /translation="MLDIASGHPGIDLYLAQSYERVRGMSSRFAAAICGHLIRRQSAL
                     GIGGELVEIGTFEGRFFIAMALGLAPGEKALGIDRFDWPDAGVEGRFLANCAAHGIAR
                     DRYSSWKTDSREITSGQLRERLGDRPIRFVHIDSHNSRECLTNDLELVAPVLHRDGII
                     CLDDMLHPGYPMVITAVFDYFARHPEMRLLCVVDREDIVAAPKFLICRG"
     gene            complement(660..1751)
                     /locus_tag="VLJ17_12765"
     CDS             complement(660..1751)
                     /locus_tag="VLJ17_12765"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HSV23887.1"
                     /translation="MKRGDLGIAVIGAGRIGTLRARLAAKHPAVQFLAIADRDLGRAA
                     ALAAQAGADLHSADNDAIIAHRNVTAVIVSTPEQEHVAPVVKALALGKPVLVEKPLAL
                     SLEGADDIMAALRASNGDLRVGYSRRYKECFLRAKEQMLHRRLGRVVGGTARVYNSRA
                     QAFSILKRDPHATPVLDVLTYYVDLMCWFLDGNRPVEVVARGQHGIFRDAGYDAHDVT
                     WAIVTFADGAVINLGVSYALPARYPTLGQSDRVELLGTEGTMIIDDDHMDHLLFSEHG
                     VPHAYVPDHAVNMAFLGSNTAGDWAVGDFWGPLGNETRAWLDHLATGAATVHTTAAQA
                     RINLETTIAIERAVLTGRSVRLPLEGGIV"
     gene            complement(1791..3116)
                     /locus_tag="VLJ17_12770"
     CDS             complement(1791..3116)
                     /locus_tag="VLJ17_12770"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HSV23888.1"
                     /translation="MSDESDDALVKSRPPAEHRCSGEAATQQSDRGRQQPTSVGGADK
                     KGKGALAGIRVLDLTRVLAGPTCAMMLGDMGADVIKVEPPSGGDDTRGWGPPFAGGES
                     AYFLGANRNKRSMTLNIAVSAGQKLLAGLIEKSDVVIDNFKLGTMAKWGFTDAWFDVH
                     APGAVRCAITGYGSTGPKAALPGYDFILQAESGLMSICGEPDGTPTKYGVAIVDICTG
                     MLACNAILAALNARHGDGRGQKVEVSLYESALHMLVNVASNVLVSGRGGARFGNGHPS
                     IVPYTTYPAKDAMLALAIGNDTQFARCAAVLGRPEWADDPRFATNRARVENRRLLDGA
                     IAQALAADNADNWLVNLKAAGVPCGRINSVAEALADPQTAARQMVETVQHPTVGELKL
                     VGMPYKFSGTPASVRRPPPTLGEHTDEILRNELGLDAAEIAGLREQKVI"
     gene            complement(3113..4057)
                     /locus_tag="VLJ17_12775"
     CDS             complement(3113..4057)
                     /locus_tag="VLJ17_12775"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HSV23889.1"
                     /translation="MANKPARVPTSKAISAKSRGYRDILYDVKNQVAWVTINRQRALN
                     AFREQTLDEMIDALKTTRNDPSIACAVVTGAGDKAFSAGGDFYAMMRLNWTNAAMWND
                     RMQGLAMTIRGLPIPVIAMVNGWCMGGGHELALWCDLVVASENSVFGQTGAQVGACPT
                     VGATQYLPRIIGERLAREMIFCARRFTAKEAVEIGLINKCVPRQDLLKETLAWCETIK
                     SLSPQTLRMTKKSLNFESDLLYASWQHGMELLAHVWGSEESLEGMNAFLQDRKPDFQK
                     FRIRNKQELEAYLEGCAKDLNAPPSMRKGARKNGKSAT"
     gene            complement(4470..4652)
                     /locus_tag="VLJ17_12780"
     CDS             complement(4470..4652)
                     /locus_tag="VLJ17_12780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23890.1"
                     /translation="MLGSLLSLLGSLLLALLVCYWILVALNLGNPVPVPSPPRVVPIL
                     TLPPDDEEDDEEGPVG"
     gene            complement(4715..6274)
                     /locus_tag="VLJ17_12785"
     CDS             complement(4715..6274)
                     /locus_tag="VLJ17_12785"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSV23891.1"
                     /translation="MSAQFRDFLEKLMAIGELERVTEEIDLRHLSARIGASKTALWFT
                     RVRGYDIGVVTGIVGSRARMGASLDCHHRDIGKAFVKRIGERKPPVMVNTGPVRDVIV
                     KGDDVDLTALPVPLISDLDGGPYITSGIGISRDPEYGRNAGAYRLMIRTRRDTSVDLV
                     GASDLKLFYDRALRQGRGLPFAVAIGTHPSIMMAAAHMAPSGLDEFELAGGLAGTPIE
                     LVKCETIDLEVPADAEIVLEGELLPTGWTQDEGRFGDFTGFVGPIKWNPIFRVNAITH
                     RKNPVFYSLHMPDEVDYLVAPPLEGSAWQALATAGIVGKAVYAPAPSGCNFHLYAAIK
                     KRPGEGKNAVLALMSLKRVKHVVVTDDDIDIFDAAQLERALAYRVQPARDIIVVEGAR
                     GSHLDPSIQLQVGKGALAPLTAKWGVDATIPEGSDLSEYEAISYPFTGDAAEQGGVPR
                     PDRNIGPEALAAEIAAQLGTPRHFVDILKFFDDVPHRTVVQAWAILREADRLDREVKS
                     GKYMLKDTTRL"
BASE COUNT         1329 a         2193 c         2151 g         1344 t
ORIGIN      
        1 gccgcggcaa atgagaaatt ttggcgccgc cacgatatct tcgcgatcga caacgcaaag
       61 cagacgcatc tcgggatgac gagcgaaata gtcgaacacg gccgtgatca ccatcggata
      121 gccggggtgg agcatgtcgt cgaggcagat gattccgtcg cgatgcaata ccggggcgac
      181 cagttccaga tcgttggtca ggcactcgcg ggagttgtgg ctgtcgatgt gaacaaagcg
      241 gatgggccgg tcgccgagcc tttcccgcag ctggcctgaa gtaatctcgc ggctgtccgt
      301 tttccaggat gagtagcgat cgcgcgcaat gccgtgggcg gcgcaattag caagaaaacg
      361 cccctcaacg ccggcgtcag gccaatcgaa gcggtcgatg ccgagtgctt tttcacccgg
      421 cgccaagccg agcgccatcg cgatgaaaaa gcgaccttcg aacgtgccga tttcgacgag
      481 ttcgccgcca atgccgagcg ccgactgccg tcgaataagg tgcccgcaaa tagcggcggc
      541 gaagcgggag gacatgcccc gcacccgctc gtagctttgc gcaaggtaga gatcaatgcc
      601 gggatggccg ctggcgatgt caagcatcaa atgacaccct tgttatcacg cacctgtatt
      661 cacacaattc caccctccaa tggcagccgc accgatcgtc cggttagcac cgcgcgctcg
      721 atcgcgatgg tggtttcgag attgatgcgc gcctgcgccg ccgtggtgtg caccgtcgcg
      781 gcgccagtgg cgagatgatc gagccaggcg cgggtctcgt tgccgagcgg gccccagaaa
      841 tctccgaccg cccagtcgcc ggcggtgttg ctgccgagaa aagccatatt gacggcgtgg
      901 tccggcacat aggcgtgagg cacgccgtgc tcggagaaca gcaggtggtc catgtgatcg
      961 tcgtcgatga tcatggtgcc ttcggtgccg agcaattcca ccctgtcgga ttgcccaagc
     1021 gttggatagc gcgccggcaa tgcgtagctg acgccgaggt tgatgacggc gccgtccgca
     1081 aaggtgacga tcgcccaagt gacatcatgg gcgtcatagc cggcatcgcg aaaaatgcca
     1141 tgctggcccc gcgccaccac ctccacgggt cggttaccgt caagaaacca gcacatcagg
     1201 tcgacatagt aggtgagtac gtcgagcacc ggggtggcgt gcggatcgcg cttgaggatc
     1261 gagaacgcct gggcgcgcga gttgtaaacc cgcgcagtgc cacccacgac tctgccgagt
     1321 ctgcggtgca gcatctgctc cttggcgcgc aagaagcatt ccttgtagcg gcggctataa
     1381 ccaacccgca ggtcgccatt actggcacgc agcgcagcca tgatgtcgtc ggcgccttcg
     1441 aggctgaggg ccagcggctt ttccaccagc accggcttgc cgagcgccag cgccttgacg
     1501 acgggcgcca catgctcctg ctccggcgtt gagacgatga cggcggtcac gttgcgatgc
     1561 gcgatgatgg catcgttgtc ggcggaatga aggtcggcac cggcttgcgc ggcaagcgcc
     1621 gcggcgcggc caagatcgcg gtcggcgatc gcgaggaatt gtaccgccgg atgcttggcg
     1681 gcgagccgtg cccgcaatgt cccgatgcgg cccgcaccaa tgaccgcgat gccgagatca
     1741 ccgcgtttca tggcggcgcc ttccccgccg cggctttcga ggccgccacc tcaaatcacc
     1801 ttctgctcgc gcagcccggc gatttcggcc gcatccagcc ctagttcatt tcgcaatatc
     1861 tcgtccgtat gttcacccaa ggttggcggc ggacgacgca ccgaggctgg cgtgccggag
     1921 aacttgtagg gcatgccgac cagcttgagc tccccgacag tcggatgctg cacggtctcg
     1981 accatctgcc gagcggccgt ctgcggatcg gcgagggcct cggcgacgga attgatccgg
     2041 ccgcacggca caccggcggc cttcagattg acaagccagt tgtcggcgtt gtcggccgcc
     2101 agcgcctgcg caatggcgcc gtcgaggaga cgacggtttt cgacgcgtgc gcgattggtg
     2161 gcaaagcgcg gatcatctgc ccattcggga cggccgagca cagcggcgca cctggcaaac
     2221 tgggtgtcgt tgccgatggc gagcgccaac atggcgtcct tggccggata ggtcgtgtag
     2281 ggcacgatgc tcggatggcc attgccgaac cgcgctccgc ctcggccgga tacgagcacg
     2341 ttcgacgcca cgttaaccag catgtggagc gcggactcat acagtgacac ctcaaccttc
     2401 tggccgcgac cgtcgccgtg gcgggcgttg agagcagcaa ggatggcgtt gcaggcgagc
     2461 atcccggtgc agatatcgac aatggcgacg ccatatttgg tcggcgtgcc gtccggctcg
     2521 ccgcagatgc tcataaggcc cgattcggcc tggagaatga aatcatagcc cggcagcgcc
     2581 gccttggggc cggtcgatcc gtagcccgtg atcgcgcagc gcaccgcgcc gggcgcgtgg
     2641 acgtcgaacc aggcatccgt aaagccccat ttggccatgg tccccagctt gaagttgtcg
     2701 atgacgacat cagatttttc aatcagccca gcgagcagct tctgtccagc cgacaccgcg
     2761 atgttgagcg tcatcgagcg cttgttacgg ttggcaccga gaaagtaagc ggattcgccg
     2821 ccagcgaatg gcggccccca gccgcgggtg tcgtcgccgc ccgagggcgg ttcgactttg
     2881 ataacgtccg cccccatgtc gccgagcatc atggcgcagg tcggccccgc gagcacgcgc
     2941 gtcagatcga gcacccgaat gccggcgagc gcccctttcc ctttcttatc cgctccccca
     3001 accgatgtcg gctgttgccg acctcggtca ctttgttgcg tggccgcctc cccgctgcag
     3061 cgatgttcgg ctggggggcg agatttgacg agtgcgtcgt cggactcatc gctcatgtgg
     3121 cagacttgcc gttctttcgt gcgccctttc gcatcgaggg cggcgcgttc aagtccttgg
     3181 cgcatccctc aaggtaagct tcaagctcct gcttgttgcg aatgcggaac ttctggaagt
     3241 ccggcttacg gtcctgaaga aacgcgttca tgccttcaag actctcctcg gagccccata
     3301 catgcgccaa cagctccatt ccgtgttgcc aggaggcata gagcagatcg gactcaaagt
     3361 tcaggctctt tttggtcatc cgcagggtct gtgggctgag gctcttgatg gtctcgcacc
     3421 aagccagcgt ctccttcagc aaatcctgcc ggggcacgca tttgttgatg aggccgattt
     3481 cgacggcctc cttggcggtg aagcgacgag cgcaaaaaat catttcgcgg gccagccgct
     3541 cgccaatgat gcgcggaaga tattgcgtgg cgccgaccgt cggacaggca ccgacctggg
     3601 cgccggtctg accaaaaacg gaattctccg acgcgacgac gagatcgcac cacagcgcga
     3661 gttcgtgccc cccgcccatg caccagccgt tgaccatggc gatcaccggg ataggcaagc
     3721 cgcggattgt catggcaagc ccttgcatgc ggtcgttcca catcgccgca ttggtccagt
     3781 tgagccgcat catggcgtag aaatcgccgc ccgccgaaaa ggccttgtcg cccgccccag
     3841 ttaccaccgc gcaggcgata gagggatcgt tgcgggtcgt cttcagggcg tcgatcattt
     3901 cgtcgagcgt ctgctcacga aacgcattaa gcgcacgctg ccggttgatg gtaacccacg
     3961 ccacctggtt cttcacgtcg tagaggatat cccggtagcc gcggcttttc gctgagattg
     4021 ccttactggt cggtactctt gccggtttgt tcgccatgct tcttccctcg gcgcggcttg
     4081 cccgcccgcg gcgttgtaag acagcacggg gtgagcgaca aggcgctggg gtacgctagg
     4141 atgggctgag cggtagcgaa gcccatcact taactacaaa cactcttaga gttcttcgac
     4201 agaacgcttc caaggttcaa aatgtttgga ctcctgtcaa acctctaaaa gttcggatcg
     4261 ttctgtcaga attcgtgaaa tcgccctgcg cgctttcccg attaatgcct gacggggagg
     4321 atttttccac ccgccgatcc attcatcaat tggggtgcgg tacgcaattc gatcccgcgc
     4381 agcgctcttg agacgaaccg atgatgtcat aggccgccag tgcttcgagc gcgttcggcg
     4441 cctccggata acgtatttct cgttgtcacc tatccaacag ggccttcctc gtcgtcctcc
     4501 tcatcatccg gcggcagagt gaggatcggg accacgcgag gaggtgacgg cactgggact
     4561 gggttcccca gatttagagc taccaatatc cagtagcaga cgagcaacgc caaaagcagc
     4621 gaaccaagta ggctgaggag agagcctaac atgttggctc cgcttcgagg gccattttca
     4681 gatgccgtcc cgaagccgcg cagcagcgcg ggcgttacaa tcgcgtggtg tctttgagca
     4741 tgtacttccc actcttaacc tcccggtcca gccggtctgc ttcgcgcagg atcgcccagg
     4801 cctgaacgac agtccggtgc gggacatcat cgaagaattt cagaatatcg acgaaatgcc
     4861 gcggcgtgcc gagttgcgcg gcgatctcgg ccgcgagcgc ttcggggccg atgttacggt
     4921 cggggcgcgg caccccaccc tgctccgccg catcaccggt gaacgggtag gaaatcgctt
     4981 cgtactcgct caaatccgag ccttccggaa tggtggcgtc cacgccccat tttgccgtca
     5041 ggggcgcgag cgcgcccttc ccgacctgga gctggatgct cggatcgaga tgggagccgc
     5101 gcgcaccctc gaccacgatg atgtctcggg cgggctgcac ccgataggca agcgcgcgtt
     5161 cgagctgcgc cgcatcgaag atgtcgatgt cgtcgtcggt caccaccaca tgcttgacgc
     5221 gtttgagtga catcagggcc agcaccgcgt tcttgccttc gccgggccgt ttcttgatgg
     5281 cggcatagag gtggaagttg cagcccgacg gcgccggcgc gtagaccgcc ttgccgacaa
     5341 tcccggcagt ggcaagcgcc tgccaggcgc tgccttccaa cggtggcgcc accaggtaat
     5401 cgacctcatc cggcatatga agcgagtaga acaccggatt cttgcggtgg gtgatagcgt
     5461 tgacgcgaaa aatcggattc cacttgatcg gcccgacgaa gcccgtgaag tcgccgaacc
     5521 ggccttcatc ctgtgtccag ccggtcggca gcaactcgcc ttcgagcacg atctcggcgt
     5581 cggccggaac ctcgagatcg atagtctcgc atttaacaag ctcgattggt gtgccggcga
     5641 gcccgcctgc caactcgaat tcgtcgagac cggacggcgc catatgggcg gctgccatca
     5701 tgattgacgg gtgggtcccg atcgcgaccg cgaaaggcag cccgcggccc tggcgaaggg
     5761 cgcggtcata gaacagcttc aagtcactcg ccccgaccag atcgacactg gtgtcacgcc
     5821 tggtgcggat catcagccga taggcgccgg cgttgcggcc gtattcgggg tcgcgggaaa
     5881 tgccgatgcc ggaggtgata taagggcccc cgtcaagatc gctgatcaac ggcaccggca
     5941 gcgccgtgag atcgacgtcg tcgcccttga caatgacgtc gcgcaccggc ccggtgttca
     6001 ccatcacggg cggcttgcgt tcgccgatcc gcttgacaaa agccttgccg atgtcgcggt
     6061 gatggcagtc gagcgaagcc cccatgcggg cgcgcgaacc aacgatgccg gtaacgacac
     6121 caatgtcgta accgcgcacc cgcgtaaacc acagcgcagt cttcgacgcc ccaatacgcg
     6181 ccgagaggtg gcgcaggtcg atctcttcag tgacccgctc caattcgccg atcgccatca
     6241 gtttttccag aaagtcccga aactgtgccg acatgtcatt cacttttgcc cttcccacct
     6301 gcggctatcg catgcacaca tctctttgcg caaccgtcac caccacgcca aattgatggg
     6361 cgacttgagt agccgtgacg gcagcacttt gcagcggatt gtaccccgga attcagccgc
     6421 ctcatgggac ctgcacggcc accttgagat gctatgatgg gccgaacgac cgagtggcgc
     6481 cgcgagatca aacgtcgatt tttcccgcta gggatagcca aaggcttctc cagcgacatg
     6541 cgccttcggc ttcccggaaa actcgcgtcg gatgccatct ttgtttgcga tatccagtgg
     6601 gaaaaatacg tccgcgcgtt gtcatcaatt ttgggaaatg tggcggcgct ggcgtgatct
     6661 gccacggcca gtggatactt ccagcagacg tgaccaccag ttgcacctgc gcggccgcct
     6721 ggcatcgggc cgtcattcaa cgaccggcgg ttggttccga caagatcgct cgttgatcga
     6781 ccgcatgttc catctctcgc acctccggcc gcccggcgag gcggactttg cttgccctgt
     6841 ttaacgaagt cgaagattgg tggcacaggg ttcggtcggc ccgcagctgc gcatcattgc
     6901 gatgcgactt tgagcgtgac tttgagcgtg acgtggagca gatgtcagtc cgcaaataac
     6961 gtatgaaaat gtaaatagag cgaagaggct ctcacttttc aatcgatcgg tagcgag
//
LOCUS       DATILV010000552         1906 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4217636, whole genome shotgun sequence.
ACCESSION   DATILV010000552 DATILV010000000
VERSION     DATILV010000552.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1906)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1906)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1906
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4217636"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(90..1370)
                     /locus_tag="VLJ17_12790"
     CDS             complement(90..1370)
                     /locus_tag="VLJ17_12790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23892.1"
                     /translation="MKTRYTHSLLMVVTLLLSGCPGGGDNNNNLAIQFEKTMAVPNVG
                     GTTNFSFDISAVDPVMARYYFTDRNNKSVDVFDIKTDTFLKQITGGFAGCNTGPSCVG
                     ADNSKSGPDGLTLISGTTLIYVGDVNSVKIIDTQTDTVVKTIAIGGASGLRADEGCYD
                     PDDKIFMISSPEESPPFATFIDTTTQQIIATVLFTDPGTGPGGPPAAGLEACVYDHGT
                     ASFIVNNDGSTANPHGEVDVIPAAFIRTGNPANPVTLTLPVPTAGSGFKIFPLGNCDP
                     TGLDLGPGTDMGVMCRQGTTGALLTFQILDRTNGTVRAVLNAGGGDQIAYDAATDRYY
                     LASSRFTANGLAAVNGACSAAAPCTPMLFLVDATTRQIVTSIATGNNAHSVGVDPMTH
                     QVYLPFSSPAAPAGCATCAANFPAAAGVGVYLAR"
BASE COUNT          382 a          528 c          583 g          413 t
ORIGIN      
        1 cgtttaaatg tcttgctgca gatgttcagt gtgagaaata gctgaccggg cggcgtcgct
       61 accgagccgc gattggggcg ccgcgagcgc tagcgcgcta aatacacgcc aactccggcg
      121 gcagcgggga aatttgctgc gcacgtcgcg caacctgccg gagctgccgg ggacgagaac
      181 ggtagataca cctgatgcgt cattggatcg acaccgaccg agtgggcatt gttccccgtc
      241 gcaatactcg taactatttg acgcgtcgtt gcgtcaacca ggaagagcat cggcgtgcat
      301 ggtgctgctg cactacaagc cccgttgaca gcggcaagtc cattcgcagt aaaccggctg
      361 gaggcaagat aatatcgatc tgttgccgcg tcgtaggcga tctggtcgcc gccacccgca
      421 ttgagcaccg cgcgaacggt gccattcgta cgatcgagaa tttggaaggt gagtagcgcg
      481 ccggttgtcc cctgcctgca catgacgccc atgtccgtac cgggtccgag atcgagcccc
      541 gtcgggtcgc agttgccaag agggaagatc ttgaacccgc ttccagccgt aggaacgggg
      601 agcgtaagcg taacgggatt ggccggattg ccagtgcgta tgaaagccgc agggatgacg
      661 tcgacctcac catgtggatt ggctgtcgat ccgtcgttgt tgacaataaa gctcgcggtc
      721 ccgtgatcgt agacgcaggc ctcgagtccc gctgccgggg ggccgccggg accggtgcca
      781 ggatcggtga acagcacggt cgcgatgatc tgctgcgtcg tcgtatcgat gaacgtcgca
      841 aacggcgggc tttcctccgg actgctgatc atgaatatct tatcgtccgg atcatagcaa
      901 ccttcgtcgg cgcgcaaacc cgaggcgccg ccgatggcga ttgttttgac gacggtgtcg
      961 gtctgagtgt cgataatctt cactgagttg acgtcgccta cgtagatcaa agtcgttccc
     1021 gaaattagcg tgaggccgtc gggacctgat ttggaattgt ccgcgccgac gcagctgggc
     1081 ccggtattgc agccggcaaa tccgccagtg atctgcttga ggaacgtatc ggtcttgatg
     1141 tcgaatacat cgacggactt gttgtttctg tccgtgaagt agtagcgcgc catgacggga
     1201 tccacggcac tgatgtcgaa agagaagttg gtcgtgccgc cgacatttgg cactgccatg
     1261 gtcttctcaa attgaatggc cagattattg ttgttatcac caccaccggg gcagccagag
     1321 agaagcagtg ttacaaccat aagcaagcta tgcgtgtagc gcgttttcat tttctcctcc
     1381 ctaggatcaa acgtctaaat gcgcatggcc ttaacgaccc accgacattc aaggccatag
     1441 ccttgataac tatggacgga agatgcttgc ggttcgctat caagttgctg acaagcggct
     1501 gacggtcgcc ttgcggggca ggtccggggc cgtttactgt ttcacgagcg tcagcgagct
     1561 caagaagcgc ggcgaagcaa cgatggcgcg aacgtcagct tccctgagtt gacagtccgc
     1621 tttcaggaat atcgagaggc ggctcggggt cgaactgcga ctgtcgacta ctaggcggct
     1681 cacggccata accggtcttt tgggcgggcg tcaaggtgcg cctcacagcg gacgttcgag
     1741 cccggattcc tgcggcctcg ccggtccagt gttgtttgtc gtgatcgtcg cggcacgaag
     1801 aggctacggt tgcttcaaaa tgtccgcgct gaccactacg gctgagcctg gccccttgtt
     1861 ttccacccag tgcacggtct ccttggtttc gtactttgca gagagc
//
LOCUS       DATILV010000553         2751 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2433619, whole genome shotgun sequence.
ACCESSION   DATILV010000553 DATILV010000000
VERSION     DATILV010000553.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2751)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2751)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2751
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2433619"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1128
                     /locus_tag="VLJ17_12795"
     CDS             <1..1128
                     /locus_tag="VLJ17_12795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019331326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1182 family transposase"
                     /protein_id="HSV23893.1"
                     /translation="FKTIADFRKDNGKAIREVCRAFVALCRELDLLSEASVAIDGSKF
                     KAVNARDKNFTEAKMKRRLERIEESIARYIAQLETADRRGDAMPEAKVARFKDKIAKL
                     NEEIARLSVINAEMVKSKDEQISLTDPDARSMATSGKDTGIVGYNVQAAVDTKNHLIV
                     AHEVTNVGTDRHQLSNMAEQARTEMGVETLDAVADRGYYASEEIRACEEAGIAVTLPK
                     PMTSNAKAAGRFGKQDFRYVAAEDVYICPAGQKLTYFFTTADKGLVLRRYRTNACQGC
                     AIKHSCTTGKERLISRWEHEAVLETVQARLDHHPEKMTVRRSTAEHPFGTIKGWMGAT
                     HFLTKRLPKVATEMALNVLAYNIKRVMAIIGVAGLLEALAT"
     gene            complement(1416..1871)
                     /locus_tag="VLJ17_12800"
     CDS             complement(1416..1871)
                     /locus_tag="VLJ17_12800"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HSV23894.1"
                     /translation="MRKGDVVTDFELPDETGAPRRLSGLLADGPVVLFFYPAAMSLGC
                     TVESCHFRDLIGEFKAVGAQPVGISADRVERQRHFAEKHSLGYPLLSDSDQVVARQFG
                     VRGWIPMMPLQRVTFVIDTDLTVLEVISSELVMTVHADRALEVLKKRQR"
     gene            2178..2351
                     /locus_tag="VLJ17_12805"
     CDS             2178..2351
                     /locus_tag="VLJ17_12805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23895.1"
                     /translation="MQSAEQCRDCAAEYKSLAMRPGISIRRADLLMSISHSWLVLAGL
                     LERLADIVEEEGE"
BASE COUNT          608 a          769 c          844 g          530 t
ORIGIN      
        1 ttcaagacca tcgcggattt ccgtaaggac aatggcaagg ccattcgtga ggtttgccgt
       61 gccttcgtgg cactgtgccg cgagcttgat ttgctgagcg aggcgagcgt cgccattgac
      121 ggatccaaat tcaaggccgt caatgcccgc gataagaact tcaccgaagc caagatgaaa
      181 cggcgtttgg agcggattga ggagagcatc gcgcgctaca tagcgcaact ggagaccgcc
      241 gaccgccgcg gtgacgcgat gccagaggca aaggttgcgc ggttcaagga caaaatcgcg
      301 aaactgaacg aggagatcgc gcggctcagt gtaatcaatg ccgagatggt gaagagtaaa
      361 gacgagcaaa tctcgctgac cgatcctgat gcgcgttcga tggcaacgag cggcaaggac
      421 accgggatcg tcggctacaa cgtgcaagcc gcagtcgata ccaagaacca tctgattgtg
      481 gcccacgagg tgaccaacgt tggcacggat cgccatcaac tgtcgaatat ggcggagcag
      541 gcgcgaactg agatgggcgt tgagacgctc gatgctgtgg cggatcgcgg ctattacgcg
      601 agcgaagaga ttcgtgcctg cgaagaggca ggcatcgccg tcacgctacc aaagcctatg
      661 acctcgaacg cgaaggcggc agggcgtttc ggcaagcagg acttccggta cgtggcggcg
      721 gaagacgtgt acatttgtcc tgccggacaa aagcttacct acttctttac gaccgcggac
      781 aaaggtttgg tgttacgtcg ctaccggacc aacgcctgtc agggttgcgc tatcaagcat
      841 agctgcacca ctggcaagga gcgactgatc tcccgatggg aacacgaggc cgtgcttgag
      901 actgtgcagg cgcgcctcga tcaccatcca gagaaaatga cagtgcgtcg ttcgacagcg
      961 gaacacccgt tcggcaccat caagggctgg atgggagcaa cgcactttct cacgaaacgg
     1021 ctgccgaagg tggcaactga gatggcgctc aatgtgctcg cctacaacat aaagcgcgtg
     1081 atggcgatca tcggcgtggc tgggctgctg gaggccttgg caacttgagc cagggacttg
     1141 cgcattcaaa tggacgccaa cagacggcct agggagcgcc acgcgcgccc ggagatggct
     1201 tccaggaaga atgtgttcag ccgggcaagt tgccggcggt gcggtctatg cgcgatgctg
     1261 atacgagttt tttttacaca gcctgggcca acagcggaag tgagacgttt cactcaatca
     1321 cttcgtcagc gcgagcccgc agcgatggtg gcaccgtacg accgagtcgg tttggccatc
     1381 cgatgcgcag ttgtgttgtc aattccagga cacgatcaac gctggcgctt tttgagcact
     1441 tccagcgccc ggtcggcgtg cacggtcatt accaactcac tgctgatcac ctcgagcacg
     1501 gtcaggtcgg tatcgatcac gaacgttacg cgctgcagag gcatcatcgg aatccacccc
     1561 ctgaccccga actggcgtgc gaccacctga tcgctgtccg ataacagtgg atagcccagt
     1621 gaatgtttct cggcaaagtg ccgctgccgc tccaccctgt cggcgctgat gccgacgggc
     1681 tgggccccaa ctgccttgaa ctcgccgatc agatcgcgga agtgacagct ctccacagtg
     1741 cagccaaggc tcatggccgc gggatagaag aacagcacga cgggaccatc ggcgaggagc
     1801 ccggacaggc gacgcggcgc accggtctca tcgggaagct cgaaatcagt gacgacatcg
     1861 cctttgcgca cgacaggccc caacatggaa actgcgggaa ttcctggtgg cttgagacca
     1921 tataggaatt ggcgcgtgaa aaaagcccgc taagccccgc gcccccgacg gccctttgcc
     1981 taggaagacc gccggtgcgg gggtggcccc gagagttcta ggtgccggtc ccagcgcgac
     2041 cttgattgtg gccgagctaa ttgactcgcg tttgaaaccc ccggaggcgt aaacttggac
     2101 aatcaccgct ccgcctctta aggcactcta ccggtgactg agagtgttgc gctcccgccc
     2161 aaggcaaagg ggcgatcatg caaagcgccg aacagtgcag agattgcgcc gccgaataca
     2221 aatctctcgc aatgcggccc ggtatttcaa tccgtcgtgc cgatctgctt atgagcattt
     2281 cacatagttg gctggttctg gcgggtctgc ttgagcggct cgcggatatc gtggaagagg
     2341 aaggagagta ggcctgctca attggtggct tctttaatct gaatgtccct gcatgactct
     2401 aggaaggccg ctggtgagtc cgggatttgc gggcagtcat gtgccggtcg attccctcgc
     2461 cagcgcggcg cgcctgccgt gtaggcggcg gtccgacgaa accattttcc aatcgatgcg
     2521 aagccgtccg gaaacgatca ccagctagcc ttagcgtgga tccgcgttca gtgagtggcg
     2581 ttttatgtcg agttcttttc acaacgcaga cagacgcacc taccggaaag ttatgctggt
     2641 aggcttgcta ttttgcacgg cgttcgtggt gatcagcttt tttacgagag aacagccggc
     2701 aaatacctac gttctgaaaa aggcggatag gttggttcgc agcgcaggct c
//
LOCUS       DATILV010000554         4131 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4986570, whole genome shotgun sequence.
ACCESSION   DATILV010000554 DATILV010000000
VERSION     DATILV010000554.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4131
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4986570"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            357..2195
                     /locus_tag="VLJ17_12810"
     CDS             357..2195
                     /locus_tag="VLJ17_12810"
                     /EC_number="1.11.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF015131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HSV23896.1"
                     /translation="MARALGKALFWDMQVGSDGVQSCASCHFRAGADPRSKNQLSPGL
                     KRVPDPDLCFSAGRGPNFQLEAAIFPLTRLANPGVRGALDPATDSNDVVSSQGIHHPG
                     NEADPLRFLVGPANTRRVEPRNAPTTINAVFNHRQFWDGRAENIFNGVNHLGQRDADS
                     KVFRADDPRNPIEVRVELVNSSLASQAVAPIVSDLEMADPNRSRLDVGRELARGKRLQ
                     GKHALKLRPLAQQQVSPTDSVLGPMSRWPQRGLSLSRYDLMIQTAFHDKWWNARKLIR
                     VNADGTKTLIDKHDDDDNLPENEFALIQYNFSLFFGIAIQLYEATLVSDDTPWDRFRR
                     DHPAATDPALNPWTNETPEHISRLALFGAHLFNDRTRVPAGHIRCSNCHESHELTDAS
                     VRRVGLAANGPVRNRDGNVIDKGFNNIGVRPTDNDLGVGATDAFGPLSFSRRLFPNGA
                     PIGQIFDGAIVDKGFGVEGAFKVPSLRNVALTAPYFHNGDMLTLRQVVEFYGRGGNVF
                     PVNELNGTVIEPLGIPAPTLSSDEIDALVAYLETLTDDRVVFQRAPFDHPQLFVPNGH
                     PGNSNSTTDANGDGLADDVLVEIPAIGAAGGNPLPGFLEGIFGPTP"
     gene            2532..3293
                     /locus_tag="VLJ17_12815"
     CDS             2532..3293
                     /locus_tag="VLJ17_12815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23897.1"
                     /translation="MFSPSGSRNNGAHFGETAWSVVLAAGNASEPHARDALAELCQMY
                     WPPIYAYLRQRGFNRHDAQDLTQIFFQRIVQDETLRRASPARGRFRSFLLGALTRCLA
                     DEQAYLRAVKRGGGAQFISMDEVAAEEMHHQRVTMNLTPADSLDARWAGLLLERALGK
                     VRAEFSANGKAETFEALSPFLAGEKPNISYQDAAQRMGLAMSAVKTHIHRLRRQFASA
                     VRQEVMQTVSAPHEVDDELRQLRGVFVRLGQQSAL"
     gene            3359..>4131
                     /locus_tag="VLJ17_12820"
     CDS             3359..>4131
                     /locus_tag="VLJ17_12820"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSV23898.1"
                     /translation="MPSGFCPACLLATALNSPEVPSSGSRIEDYELLDEIARGGMGIV
                     YRAQQRTPSRIVALKMILPVHLRSSGAVNRFRAEAEAAASLDHECILPIYAVGETDGA
                     PFYSMKFAEGGPLSARIENYQTKPHETAALIAKLARAIAYAHERGILHRDLKPGNILF
                     DGAGKPYVSDFGLAKWLQRECDLTQTLAVLGTPFYMAPEQAANSRAVGAAADVYSLGA
                     ILYQMLTGHPPVSGETPMEVLRRAAEQAPRRPRLTNHHVP"
BASE COUNT          870 a         1253 c         1201 g          807 t
ORIGIN      
        1 gatcggatct ggagagaaca agcaaagaca caactctatc caatcaactt atgaacaata
       61 aattccttcc tggcgcagtc ttgtttagat caacaaatgc cggtggtgtc atgccaacga
      121 tagaccctgg tccccgcagg ctgcgaccga ctgggagatt cagcgccgcg tttctgattc
      181 taacggcgtt aattggaaca ggaatgatcg ttttggctca agcgccaccg aataccacca
      241 tccctcgcgt gcccaatcca ccgctgagca gcgacctagc aaatttgccg ggtgacctgc
      301 gggcggttcc ggttcccgga ccgtcgaatc taaacgactt cgtccgggat cccgccatgg
      361 cgcgcgccct cggcaaggcc cttttctggg atatgcaggt ggggagtgac ggtgtgcagt
      421 cctgcgcgag ttgccatttc cgcgccgggg ccgatccgcg atccaagaac cagctgagcc
      481 cagggctgaa gcgcgtgccc gacccagacc tctgcttttc ggccggccgg ggtcccaatt
      541 ttcaactaga agccgcgatc ttcccgttga cccggctcgc caatccaggc gttcgcggcg
      601 ctctcgatcc ggccaccgac agcaacgacg ttgtgtcttc gcaggggatc caccaccctg
      661 gtaacgaggc cgatccgctg cgttttctcg tcggcccggc aaacacccgc cgggtcgagc
      721 cgcgcaacgc tccaacgaca atcaacgctg tcttcaatca tcgccagttc tgggacgggc
      781 gtgccgagaa catttttaac ggcgtcaatc acctcggcca acgcgatgcc gattccaagg
      841 tcttccgtgc cgacgatccg agaaatccga tcgaagtgcg agtcgagttg gtgaattcca
      901 gcctcgcgtc gcaggctgtg gcaccgatcg taagcgacct tgagatggcc gatccgaacc
      961 gatctcgact cgacgtgggt cgcgaactgg cgagaggtaa acgcctgcaa ggaaagcacg
     1021 ccttgaagct tcgtccgctg gcccaacagc aggtatcgcc aacggacagc gtgctcggcc
     1081 cgatgagtcg ctggccgcag agaggtctct cattgagcag atacgaccta atgatccaga
     1141 cggcttttca cgacaaatgg tggaatgcaa gaaagctcat ccgggtaaac gccgacggaa
     1201 ccaagactct gatagataag cacgacgacg acgacaacct tcccgaaaat gagttcgcgc
     1261 tgatccagta caacttctcg ctcttcttcg ggattgccat ccagctctac gaggcaacgc
     1321 tcgtttccga tgatacgcct tgggatcgct ttcgtcgtga ccaccccgcg gcgaccgacc
     1381 cggccttgaa cccctggacg aatgagacgc cggaacacat cagccggctc gcgctcttcg
     1441 gggcacatct cttcaatgac cgcacccgcg tccccgctgg tcacatccgc tgctcgaact
     1501 gccacgagtc acatgagctc acggatgctt ccgtccgtcg cgtcggcctc gccgcgaacg
     1561 ggccggtgcg caatcgcgac ggcaatgtca tcgacaaagg tttcaacaac atcggtgtcc
     1621 ggccgaccga caacgacctc ggcgtcggcg caaccgatgc gttcgggcca ctttcgttct
     1681 cgcgccggct ctttcctaac ggtgccccga tcggccagat attcgatggc gcgatcgtgg
     1741 acaagggctt tggggttgag ggcgcgttca aagtcccgtc gcttcgcaac gtggcgctca
     1801 ctgcgcctta ctttcacaat ggagacatgc tcacgcttcg gcaggtggtc gagttctatg
     1861 gccggggcgg caatgtgttt cccgtcaacg aactcaacgg cacggtcatc gagccgctgg
     1921 gcatcccggc cccgacgcta agttccgacg agatcgacgc actcgttgct tacctggaga
     1981 cgctcaccga cgaccgggtc gtattccaac gcgcgccatt cgaccatccg cagctcttcg
     2041 tgcctaacgg acatccagga aattccaact caaccaccga tgcgaacggc gacggcttgg
     2101 ccgacgatgt gcttgtcgaa atcccggcga tcggtgccgc cggtggcaat ccgcttccgg
     2161 gctttctcga agggattttc gggccgaccc cttgattcgt gacctgcgaa gtgcaggaaa
     2221 agacgatcgc aaaattgaag tcgacaattg cgcggcagca gaaggagatt caaactctca
     2281 tggccactgt aagggaacag tctgcgcaga ttcaaaaggt gagcgccagg ctcgccgctg
     2341 cgagtctatc cagtggcgga ctcgaggcag gcaatgcagt cgcccaaacc gcgttcaacg
     2401 atcggtgaac gccgaggcaa agcgaaattg aaaccaaaca gcaccaacga tcgctacgag
     2461 ccgggcgctc gaaacaatgg aaaacggaag gagcgcttgc cggaattcta cttatttcgt
     2521 accatgcgcg aatgttttcc ccctctggtt cgcgcaacaa cggcgcgcat tttggcgaaa
     2581 cggcatggag cgttgtgctc gctgccggca acgcttctga accgcacgcg cgcgacgcgc
     2641 tagctgagct ctgccaaatg tattggccgc caatttacgc ttacctgcgc cagcgggggt
     2701 ttaaccggca tgatgcacaa gatctgacac aaattttttt ccagcgcata gttcaggatg
     2761 aaacgctccg ccgcgcttcg ccggcgcgtg gacgtttccg cagttttctg ttgggcgcgc
     2821 tcacacgctg tctcgctgac gaacaggcat atctgcgcgc agtgaaacgc ggcggcggcg
     2881 cacaattcat ttccatggac gaagtagccg ccgaagaaat gcatcatcag cgggtcacga
     2941 tgaatctcac gccggccgac tcgctcgatg cccgctgggc cggtctgctc ctggagcgcg
     3001 cactcgggaa ggtgcgcgcg gaattttccg ctaacggaaa agcggaaacg ttcgaggcgc
     3061 tgtcgccgtt tctcgcggga gagaagccga acatttcata tcaggatgct gcgcagcgaa
     3121 tgggattggc gatgagcgcg gtcaaaacgc acattcatcg gttgcgccgg caattcgcca
     3181 gcgccgtacg acaggaagtg atgcagacgg tgagcgcccc gcacgaagtg gatgacgaac
     3241 tccggcagtt gcgcggcgtt tttgtgcggc ttggacagca gtccgcttta taaattagat
     3301 ggacctgctg gcgcgcaaaa cattctgcga aacctgcggc tcatcgttgg aggtggacat
     3361 gccaagtggc ttctgcccgg cgtgtttgct agcgaccgcg ctcaattcgc cggaagtgcc
     3421 gtcaagcggc agtcgcattg aagattacga attgctagat gagatcgcgc gcggcgggat
     3481 ggggatcgtt tatcgggcgc agcagcgcac accgtcgcgg atcgtagcgc taaagatgat
     3541 cttgccggtt catctgaggt cgtccggtgc ggtaaatcgt tttcgcgctg aggcggaagc
     3601 ggcggcaagt ctcgatcacg aatgcattct gccgatctac gcggtcggcg aaacggacgg
     3661 cgcgccgttc tatagcatga agttcgcaga gggcggcccg ctctctgcga ggatcgagaa
     3721 ttaccagacc aaaccacatg aaactgcggc gctgatcgcg aagctcgccc gcgcgattgc
     3781 ttatgcgcat gagcgcggca ttctgcaccg cgacttaaag ccgggaaata ttctctttga
     3841 cggtgcgggg aaaccgtatg tgagcgattt cggactggcg aaatggttgc aacgcgaatg
     3901 cgatctcaca cagacgcttg cggttctcgg tacgccgttt tacatggccc cagaacaggc
     3961 cgcaaactcg cgcgccgttg gcgccgctgc cgatgtgtac agtctcggcg cgattttgta
     4021 ccagatgctg accggtcatc cgcccgtttc aggcgagaca ccgatggaag tgctgcgccg
     4081 cgctgccgag caagcaccaa gacgtccgcg cctgacaaat catcatgttc c
//
LOCUS       DATILV010000555         2543 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3710842, whole genome shotgun sequence.
ACCESSION   DATILV010000555 DATILV010000000
VERSION     DATILV010000555.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2543
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3710842"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(35..247)
                     /locus_tag="VLJ17_12825"
     CDS             complement(35..247)
                     /locus_tag="VLJ17_12825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HSV23899.1"
                     /translation="MSMGTVKWFNATKGFGFIQPDDGGNDVFVHISAVERAGLGTLRE
                     GQKVSYEIVADRRSGKSSADNLRAAN"
     gene            complement(507..800)
                     /gene="infA"
                     /locus_tag="VLJ17_12830"
     CDS             complement(507..800)
                     /gene="infA"
                     /locus_tag="VLJ17_12830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HSV23900.1"
                     /translation="MAKEELIQFEGLVTEILPDARYRVQLDAGHEIVAYTAGKMKKNR
                     IKTLAGDRVTVEMSPYDLEKGRLIFRHKDERPASAGPGPQRGPQRGGQFRGRR"
     gene            complement(825..2234)
                     /locus_tag="VLJ17_12835"
     CDS             complement(825..2234)
                     /locus_tag="VLJ17_12835"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HSV23901.1"
                     /translation="MTSFQDFGLADPISRALLEENYHTPTPIQAQTIPLALSGRDVVG
                     IAQTGTGKTAAFALPILNRLLANRIRPQPKTCRVLVLSPTRELSGQILDSFNAYGRHI
                     RLTSALAIGGVPMGRQVRSLMGGVDVLVATPGRLLDLVQGNALKLNQVEFLVLDEADR
                     MLDMGFINDIRKIVAKLPIRRQTLFFSATMPKDIADLAEAMLRDPARVAVTPVASTVE
                     RITQRIIQVDFAAKHAFLAELLKREPVDRTLVFTRTKHGADKVVKALARAGIAAEAIH
                     GNKSQNHRERVLGAFRSGQIRTLVATDIAARGIDVDGISHVVNFDLPNVPETYVHRIG
                     RTARAGAEGVAISLIAGAEEVGYLRDIERLIRINLPREDRRTQGGREVPPAAQQHRPG
                     RPAPRVHPHRNNDSAPTAKGPRRRRRGGGNHGAASRGDRHESARPQGSQADGIQGVAF
                     LHRESRPKFKPNRNRRPQA"
BASE COUNT          431 a          750 c          873 g          489 t
ORIGIN      
        1 tcgcaagatc atgtgccagg cttcagggaa tctcttagtt cgcggcgcgc aaattgtccg
       61 ccgacgattt gcccgagcgg cggtccgcca cgatctcgta ggagaccttc tggccttcac
      121 gcagcgtgcc aaggccggcg cgttcgacgg cgctgatgtg cacgaacaca tcgttgccgc
      181 cgtcatccgg ctggatgaag ccgaagccct tggtcgcgtt gaaccacttc acagttccca
      241 tgctcacggg gatagtcctc tagtaaaaaa agtcgaagcc cactttcgat aggctgggtg
      301 agatcgaatt tttgggaggg tcgtcagcgt ctgaaccggc tgcaccggtg gatagctaat
      361 gtcgtccggc cgaaactcga taagtcaata atattcgaag gcaggcctca aaacaatcct
      421 gagccgtgcg aatttttgct gcaggaggct tatgcgggca accgcgcatg tcacgaaaat
      481 gccacgcgcg atcgcggttt tgctcattat ctgcgccctc tgaactgtcc gccacgctgc
      541 ggtccgcgct ggggccccgg gccggcggaa gccggccgct cgtccttgtg gcggaagatc
      601 aggcggccct tctcgaggtc gtagggcgac atctcgacgg tgacgcgatc gccggccagc
      661 gtcttgatgc ggttcttctt catcttgccg gcggtgtagg cgacgatctc gtgcccggcg
      721 tcgagctgca cgcggtagcg cgcgtcggga aggatttcgg tgaccagtcc ttcgaactgg
      781 atcagctctt ctttagccat ggttcgctcc aggtcgattg acggtcaggc ttgcggacgt
      841 cggttgcggt tgggtttgaa tttcggccgg ctttcgcgat gcaaaaaggc aacgccctgt
      901 atcccgtcag cctggctgcc ctgcggacgg gccgactcat gccggtcgcc ccgcgaagcg
      961 gcgccatgat taccaccacc acggcgtctc cggcgagggc ctttcgcggt tggtgcactg
     1021 tcattgttgc gatgcggatg cacgcggggc gcaggccggc cggggcggtg ctgctgcgcc
     1081 gccggcggaa cctcgcggcc gccttgggtg cgccgatcct cgcggggcag gttgatgcgg
     1141 atcagccgct cgatgtcgcg cagatacccc acctcctcgg cgcccgcgat cagcgagatc
     1201 gcaacgccct cagcgccggc ccgcgcggtg cggccgatgc ggtggacata ggtttccggc
     1261 acgttgggca ggtcgaaatt gacgacatgg ctgatgccat cgacgtcgat gccgcgcgcg
     1321 gcgatatcgg tggccaccag cgtgcggatc tgcccggagc ggaacgcgcc gagcacgcgc
     1381 tcgcgatggt tttgcgactt gttgccatga atggcttccg cagcgatgcc ggccctggcg
     1441 agggccttca ccaccttgtc ggcgccgtgc ttggtgcggg tgaagaccag cgtgcggtcg
     1501 acaggctccc gtttcagaag ctccgccagg aaggcatgct tggccgcgaa atcgacctgg
     1561 atgatgcgct gggtgatccg ctccacggtg gaggcgaccg gcgtcacggc cacccgggcg
     1621 gggtcgcgca gcatggcctc cgcaaggtcg gcgatgtcct tgggcatggt ggccgagaag
     1681 aacagcgtct gccgcctgat cggcagcttg gcgacgattt tgcggatgtc gttgatgaag
     1741 cccatgtcga gcatgcggtc ggcttcgtcc agaaccagga attcgacctg gttgagtttg
     1801 agcgcgttgc cctgcacgag gtcgagcaga cggccgggtg tggccaccag cacgtcgacg
     1861 ccgcccatga gcgaacggac ctggcggccc atcggcacgc cgccgatcgc cagcgccgag
     1921 gtcaggcgga tgtggcgccc ataggcattg aaactgtcga ggatctggcc ggacagttcc
     1981 cgcgtcggcg agagcaccag cacgcggcag gtttttggct gcggccggat gcggttggcg
     2041 agcagccggt tgagaatcgg cagcgcaaag gcggccgtct tgccggtgcc ggtctgggca
     2101 atgccgacca cgtcacggcc ggacagcgcc agcggaatgg tttgggcctg gatgggggtg
     2161 ggcgtgtggt agttctcttc gagaagggca cgcgagatgg gatcggcgag gccgaaatcc
     2221 tgaaaggagg tcaaaaggtt tctttctgtc aaaacagcag gcgcccggcc ctttgggcca
     2281 ggagcgcgcg aggtcatcgg aagacacccg cgtgttttgg gtatcgcatt gttgggtggt
     2341 taaaggggca agccagaacg ccgtcaaacg ggctcagaac acgcggcttg cagtgaccca
     2401 gtcatcactg atgattcttt gggtcgcggt ggatatggcc catcaaggcg gcggtttcaa
     2461 ggtgaattgc gcccattggt ttcgctcggg caaaaattcc gcgtggaatg aagggcttgg
     2521 acgggctggg cggcaacgcc ttc
//
LOCUS       DATILV010000556        17201 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2434715, whole genome shotgun sequence.
ACCESSION   DATILV010000556 DATILV010000000
VERSION     DATILV010000556.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 17201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17201
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2434715"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..479
                     /locus_tag="VLJ17_12840"
     CDS             <1..479
                     /locus_tag="VLJ17_12840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020179196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HSV23902.1"
                     /translation="IQPGPEVMTQRPELFWGLIASMWIGNLMLVVLNLPLIGIWVKLL
                     AVPYRLLFPAIMAFSAIGIYSVNNSSFEIYLTALFGVLGFVWTKLGFPAPPLLLGFVL
                     GPMMEEHLRRAMLMAKGDATVFVTHPISLAFIIITAIIVVVMVAPAVKKRRGEITG"
     gene            618..1901
                     /locus_tag="VLJ17_12845"
     CDS             618..1901
                     /locus_tag="VLJ17_12845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006938831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV23903.1"
                     /translation="MRFNVPTLAVTRRSIVKAGIGALAAPAVLRVIAANAQSRAIKIG
                     HVSPRTGPLAGFGEADGFILDQVRSLLANGLQSGGKTYPVQIISKDSQSSGNRAAEVA
                     SELILGDKVDLIVASATPDTTNPVADQAEVNEVPCITTNCPWQPYFFGRNGDPKKGFT
                     WTYHFFWGLEDVIGAFLALWDSASTNKVVGGLFPNDADGNAWGDAKLGLPPALAAAGY
                     KLTDPGRYQLMNNDFTSQISAFKAVGAEIVTGNMIPPDFATFWSQAAQQGFRPKIVTI
                     GKALLFPSVIDSLGARGNGLTSEIWWTPHHPFKSGLTGQSAQQLTDAYTGATKRPWTQ
                     PIGFQHALFEVAIDVFKRTKALEPKAILDAIVATDYRSMVGPVKWTGAPVKNVTKTPL
                     VAGQWQRIGDKFELVITTNKTAPEIPVGGKLNLLG"
     gene            complement(2016..3008)
                     /gene="egtD"
                     /locus_tag="VLJ17_12850"
     CDS             complement(2016..3008)
                     /gene="egtD"
                     /locus_tag="VLJ17_12850"
                     /EC_number="2.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030745 - dimethylhistidine
                     N-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0052699 - ergothioneine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-histidine N(alpha)-methyltransferase"
                     /protein_id="HSV23904.1"
                     /translation="MGMNIVVRKPRPLVVNDVGQAFLDDVLAGLSAEPKQLPPKYFYD
                     QIGSELFQRITALPEYYLTRTETGILEAHAGDIAALIPANAAMVEFGAGSLAKTRILL
                     RAAPHVSAYVPVDISGAFLAAEAARLRHEMPDLRVLPVEADFTHPFPLPAELGARPRV
                     GFFPGSTIGNFEPHEADTLLHHAAALLGPGALFIVGVDLVKDPDILTAAYNDDAGVTA
                     AFNLNLLARINRELGGAFDLAGFHHSACYNREQHRIEMHLVSLARQKVPACGKLFDFR
                     RGETIHTENSYKYTVEAFRSHAQGAGWTNAATFVDGRNYFSVHALRANGVAKAA"
     gene            complement(3041..4312)
                     /gene="egtB"
                     /locus_tag="VLJ17_12855"
     CDS             complement(3041..4312)
                     /gene="egtB"
                     /locus_tag="VLJ17_12855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0052699 - ergothioneine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ergothioneine biosynthesis protein EgtB"
                     /protein_id="HSV23905.1"
                     /translation="MQLRDDREPRRQAPLRQRGGFWPTQYGDAARDVWLETYRAVRAE
                     TERRAATLSPEDQVIQSMPDASPIKWHRAHTTWFFEQFVVVPHAPSYRGYDARFAFLF
                     NSYYVAAGPRHARPKRGLVTRPDVAEVARYRAHVDAAIASLLTNAAPEVLARVMPVLE
                     IGLHHEQQHQELMLTDVLHAFSENPTAPIFDPDWRWPQCAARRNDWYDLPEGIHTVGH
                     QTQGFCFDNETPAHRALVGPVRLARNLVTNGEWLAFMRDDGYARPELWLSDGWATVVA
                     EAWSAPGNWREIDGNWCTFTLGGLLPIDEERAVSHTSYYEADAFARWAGKHLPSEFEW
                     EVAARAGELEDACGVVWQWTRSAYAPYPAYRPIAGALGEYNGKFMINQMVLRGSSVAT
                     APGHARMSYRNFFHPAARWQFTGLRLADFPL"
     gene            complement(4503..5246)
                     /locus_tag="VLJ17_12860"
     CDS             complement(4503..5246)
                     /locus_tag="VLJ17_12860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009465382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp/Glu racemase"
                     /protein_id="HSV23906.1"
                     /translation="MPDTLGYRKRIGIVVPSTNTTVQPECELLRPRGITNHIARATIK
                     ERPLNTEQAFSEHMEMMREGMTAAIDQIMTAGLDHIIIGIALETFWGGVAAASMLQAA
                     LAASAGVDISMGSTAAVAALRAFGVQRIAVLTPHQPRGDEIVRAYLREADFDVVRLKG
                     LAVTTPRMIAQVPLADIRTALKELDGPDVEALLQVGTALPMVAVAAEAERWLSKPVLA
                     INTVTYWHALRQCGVEDRVYGCGRVLEEF"
     gene            5604..5846
                     /locus_tag="VLJ17_12865"
     CDS             5604..5846
                     /locus_tag="VLJ17_12865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23907.1"
                     /translation="MTHEINGFAIEPCGGVRHLFRRTAEPRHEYIFEITSNRVALRAT
                     LPDDAGIDRKKALDDADRSEKDAWNAAKEFQRRVFD"
     gene            6143..7021
                     /locus_tag="VLJ17_12870"
     CDS             6143..7021
                     /locus_tag="VLJ17_12870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010682907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV23908.1"
                     /translation="MPHITTDDGVKLFYQEAGAGIPIVFVHEFAGDSRSWEAQFRHFG
                     RRYRCIAYNARGFPPSDVPERVERYSQARARDDIRAVLDGLKIDNAHIVGLSMGGFAT
                     LHFGFTYPDRARSLTIGGCGYGAAPDQRKKFIEEAEAAAARFENIGMAKAAEAYALGP
                     TRVQFQNKDPRGWREFADQLADHSGTGSALTMRGVQSRRPSLYDLTADMQKITAPTLI
                     MTGDEDWACLEPGILMKKMIPSAGLVVMPNCGHAINLEDPDAYNRHLDDFFHAVELGR
                     WPARDPRAVVATILGR"
     gene            7069..7503
                     /locus_tag="VLJ17_12875"
     CDS             7069..7503
                     /locus_tag="VLJ17_12875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018327703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1772 domain-containing protein"
                     /protein_id="HSV23909.1"
                     /translation="MFGQLALIAAAAFTGAAIYINVAEQPARLQLDERALLTEWQPSY
                     KRGLAMQAPLAIVGFLCGALAAWQTANWWWLGGALVLVANWPFTIFAILSTNNQLMAM
                     DPGVATAEARRLIEHWGHLHAVRSALGAIAALIFLIASVSSV"
     gene            7572..8354
                     /locus_tag="VLJ17_12880"
     CDS             7572..8354
                     /locus_tag="VLJ17_12880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012706255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HSV23910.1"
                     /translation="MSEPIWNQFLTERDKAVFATSGYGARQGFSKRPALLVIDVNYAF
                     CGDKPEPILQSIKRWRNSCGEDAWVALPYIRALIDKAHDKGLPVIYTTGVRRGDLWDS
                     GSWAWKNNRSAEDAANKTVTCNLDGNEIMAEIAPGPQDIVIYKQKPSGFFGTNLASYL
                     TLLACDGLIIAGTTTSGCVRASVLDAFSLNYRITLAEEGCFDRAQASHAINLCDMNAK
                     YADVVKTAEVLAFFDTLPKGMFDLPKGVTAPEPHPMRKAAGY"
     gene            complement(8470..9351)
                     /locus_tag="VLJ17_12885"
     CDS             complement(8470..9351)
                     /locus_tag="VLJ17_12885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23911.1"
                     /translation="MPHMANIRSRSPIAGVFAAAMLGWPAIGAESAVPNFSPDSRTGW
                     IAGVPDGETPIGDEFLQPPSGPGPVTFDKAHPYVDNRAARRSGKQSTNRVADLSNPIL
                     QPWVKEELRKLNQRALTETMLWTPKERCWPIGVPGFLLYPVTPVYFLQTPKQVVMIWE
                     EDHMVRRVYLTDQHSPDAKPSWFGESIGHYENGDTLVVDTIGLNTRTFVDSYRTPHTE
                     QLHVVERFRIVENGKALEVTARVDDPGAFTMPWTAVQRYRRAEQGPMGEQVCAENNDK
                     FFNYDIEPIPTAHKPDF"
     gene            9608..11041
                     /locus_tag="VLJ17_12890"
     CDS             9608..11041
                     /locus_tag="VLJ17_12890"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006018752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HSV23912.1"
                     /translation="MYSNVNLFIDGAWKPAVAGKTLSVLNPATGEEIGTVAHAEKADL
                     DLALAAAQKGFETWRKVSAHERYRLMRKAADILRSRASDIATLMTMEQGKPVVEAKME
                     TAIGADIIDWFAEEARRTYGRTVPARVDGVYQLEMKEPVGPVAAFTPWNFPINQAVRK
                     ISCAVAAGCSIIIKGPEETPAACAGLVDAFVQAGIPAGVINLVFGVPSEISAYLIPHP
                     IIRKISFTGSTAVGKQLAALAGAHMKRVTMELGGHAPAIVFADADLDAAAKILSANKY
                     RNAGQVCVSPTRFLVQQPVYQQFVDKFATAAKSIKVGDGLKEDTRMGPLAHSRRLDAI
                     EGFVTDAVAKGAKVETGGRRIGNKGYFFEPTVLTSVPREARIMNEEPFGPVAIVNAFD
                     TFEEVVGEANRLPFGLAAYAYTRSTKTAEAIGHAIESGMVSINHHGLALPEVRFGGVK
                     DSGFGSEGGADALDAYLNTKFITQMNA"
     gene            complement(11151..12266)
                     /gene="ald"
                     /locus_tag="VLJ17_12895"
     CDS             complement(11151..12266)
                     /gene="ald"
                     /locus_tag="VLJ17_12895"
                     /EC_number="1.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019964494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000286 - alanine dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006522 - alanine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HSV23913.1"
                     /translation="MLVGVPKEIKDCEYRVGLVPSTVRELTLKGHRVFIEKDAGVGAG
                     LTDDAYVAAGAEIAAGADQVFAQAELIVKVKEPLAAERKKLRPGQVLFTYLHLAPDRA
                     QTEDLLASGCIAIAYETVTSPLGGLPLLMPMSEVAGRMAPHAGAHCLEKARGGRGVLL
                     GGVPGVPAADVLVLGGGIAGANAARIAAGMGATVTVVDRNPDVLRRVDNTLSGVQTVF
                     STRDAVETLCRRADLVIGTVLVPGATAPKLITADTVRAMKPGAVIVDVSIDQGGCAET
                     SRPTTHSHPTYIVDDVVHYCVANMPGAVARTSTFALNNMTLPYVIALADKGYRIALGQ
                     DPHLRAGLNVHEGRVTYKAVADALKLPYVPAEQALRM"
     gene            12471..13514
                     /locus_tag="VLJ17_12900"
     CDS             12471..13514
                     /locus_tag="VLJ17_12900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008973903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV23914.1"
                     /translation="MFGGAGRSPQVRPNYGLYEIRCGTRRCLALCAAFLASLCIVNAA
                     MAADRIRIAAQKTGTLAWELEIINAHGLDKKADLDIQVVELASTEAGKIALRSGSADL
                     IVSDWLWVARERSLGDNLVFFPYTSTLGAVMVPGNSTVRDLADLKGKKLAVAGGPLDK
                     SWLMLQAVARRDGLDLRTQATVVYGAPPLLSEKALQRENDATLTYWNFCAELEGKGFK
                     RGIDMEAIEKRLGASGPVAMVGYAFDAGWAAKNRSTIARFLDAAAQAKEILANSQAEW
                     QRLAPRIGVNDSTGLEIYRRRYSDGIPRRPIRDEERDAMKLYRVLAEIDAGLIGAARD
                     LDRGMFYDPGKLD"
     gene            13511..14257
                     /locus_tag="VLJ17_12905"
     CDS             13511..14257
                     /locus_tag="VLJ17_12905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007601389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV23915.1"
                     /translation="MNAALRLFSLILLVAAWYAGSEIAGQRLLPGPQTVGRTLLAEAQ
                     SGALAFHLGATLARVAVAFVIAMAAGTALGIWMGRSRLADRLADPWLVALLNLPALVI
                     IVLAYVWAGLTETAAIAAVALNKLPNATVTVREGARSLDRQLDEMAQVFLMSRWTRLR
                     HVLIPQLAPYLAAAARSGLSLVWKIVLIVELLGRSNGVGFEIGIAFQLFDVTRILAYA
                     IAFVLVMLAIETFLVQPIERHVSRWRPRAA"
     gene            14226..14960
                     /locus_tag="VLJ17_12910"
     CDS             14226..14960
                     /locus_tag="VLJ17_12910"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009031070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV23916.1"
                     /translation="MSPAGDPGQLDVSITQKSYSAASGGSIEVLRDLAFTLKAGTVGA
                     LVGPSGCGKTTLLRIITGLDSDYVGTVRLPDHGKLGMVFQEPRLLPWRNVEQNLRLGA
                     PEATDAELDVLFKVLGLAAHRHHFPGELSVGQARRVALARAFAVKPDLLVLDEPFVSL
                     DAALAKHLQEELASLVTSRHVTTLLVTHNIDEAIGLADSLFLLSASPAHVIAEVPITQ
                     PRTRHNAEELATIRDEIARRLAKVAK"
     gene            complement(15074..16132)
                     /locus_tag="VLJ17_12915"
     CDS             complement(15074..16132)
                     /locus_tag="VLJ17_12915"
                     /inference="COORDINATES: protein motif:HMM:NF028178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HSV23917.1"
                     /translation="MYIQKLPMALSLVAAFAVVGLGIGARNLGFPTPAHAQAIPKSLE
                     AGGSESELRLRKNQWTVGVAGGLLSGSYMMFADEMAQVLDDGDNLRIIPIVTYGAASN
                     LDDLLYLRGIDVAVTQSDVFEYFRTQRRTANLESRVNYIVRLPLSEMHILARTDVNSI
                     ADLQGKKVNFGPAGSASSLTGAIVFQRAGVQVEATLFDNPLALQKLRAGEIAALIRVI
                     SKPIDFFAKMPENSGLHLVPIEFTKSYGDYYAQGEFTSQEYPTLVPPGQVINTVAVPA
                     VLAVVNWPKNSDRYHRVQRFVERFFTNFDKFQQPPRHPKWRDVTLEATLPGWTRWGVA
                     ENMLQRRRQANAADAQPH"
     gene            complement(16673..>17201)
                     /locus_tag="VLJ17_12920"
     CDS             complement(16673..>17201)
                     /locus_tag="VLJ17_12920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HSV23918.1"
                     /translation="NYMTYVSANIPIGRYDPARLAYLGLGHQAVDAGAGYTYFNPQTG
                     NEFSAVLGFTCDFENARTQYQNRVDVHLDLAISKFVTKQLQTGAVGYAYQQISCDTGA
                     GNPVGCFESRTLGIGPQIGYVIAMGNLQGYLNLKGYKDFDAENRASGWSAWLTFAISP
                     AALTETPPKAPIIRK"
BASE COUNT         3314 a         5402 c         5242 g         3243 t
ORIGIN      
        1 gcatccaacc gggtcctgag gtgatgaccc agcgccctga actgttctgg ggcctcatcg
       61 cctccatgtg gatcggcaac ctcatgctgg tggtgctcaa cctgccattg atcgggatct
      121 gggtgaagct gctggcggtg ccgtaccgcc tcctgttccc cgccatcatg gcgttctcgg
      181 cgatcggcat atacagcgtc aacaactcct cgttcgaaat ttatctgacc gcgctgttcg
      241 gtgtgctcgg cttcgtatgg accaagcttg gcttcccggc gccgccgctg ctgctcggct
      301 tcgtgctcgg gccgatgatg gaagagcacc tgcgccgcgc catgctgatg gcgaagggcg
      361 atgccacggt gttcgtcacg catcctatca gtcttgcgtt tatcattatt acagccatca
      421 tcgtggtcgt gatggtggcg ccggcggtga agaagcgtcg cggcgagatt acggggtagc
      481 aaggatggtt gagcgaagct aaacccatcg acggtcgcgc ggacaggcca ttggttggct
      541 tcgcgaagag ctcaacccat ccttgcacga tggctacggt gcggcaacgg aggataaaaa
      601 tgtctgcaca tgatgaaatg cgtttcaatg tccccacgtt agcggtcacc cgccgcagca
      661 tcgtgaaggc cggcatcgga gcgctggcag ccccagcggt gttgcgcgtc attgcggcga
      721 atgcacaaag ccgcgccatc aagatcggcc atgtcagccc gcgcaccggc ccgctcgccg
      781 gattcggcga agcagacggt ttcatcctcg accaggtgcg cagcctgctt gccaacggac
      841 tgcagagtgg tggcaagact tatccggtcc agatcatcag caaggacagc cagtcgagcg
      901 gcaaccgcgc ggccgaagtc gcctccgagc tgatcttagg cgacaaagtc gatctcatcg
      961 tcgcgtccgc gacgcccgac accaccaatc cggtggctga tcaggccgaa gtcaacgagg
     1021 tgccgtgcat caccaccaat tgcccctggc aaccttattt cttcggccgc aacggcgatc
     1081 ccaagaaagg cttcacctgg acctatcact tcttctgggg cctggaggac gtcatcggcg
     1141 cgttcctggc gctgtgggat tctgcgtcta ccaacaaggt ggtcggcggc ctgttcccca
     1201 acgatgccga cggcaatgcc tggggcgacg ccaagctcgg cttgccgcca gcgctcgcgg
     1261 cagccggcta caaactcacc gatccgggcc gctaccagct catgaacaac gacttcacgt
     1321 cacagatttc cgccttcaag gcggtcggcg ccgaaatcgt caccggcaat atgatcccgc
     1381 cggatttcgc caccttctgg tcgcaggcgg cccagcaggg cttccgcccc aagatcgtca
     1441 ccatcggcaa ggcactgctg ttcccgtcgg tgatcgactc cctcggggcg cgtggcaacg
     1501 gcctcaccag cgagatttgg tggacgccgc accatccctt caagtccggg ctcaccgggc
     1561 agagcgcgca gcagctcacc gatgcttata ccggtgcgac caagcggccg tggacccagc
     1621 ctatcggctt ccagcacgcg ctgttcgagg tcgccatcga cgtgttcaag cgcaccaaag
     1681 cgctggagcc gaaggcgatc ctggatgcga tcgtggcgac cgactaccgc tccatggtcg
     1741 gcccggtgaa gtggaccggt gcgccggtga agaacgtcac caagactccg ctggtcgccg
     1801 gccagtggca gcggatcggc gacaagttcg agctcgtcat caccaccaac aagaccgcgc
     1861 cggagattcc ggtggggggt aagttgaatt tgctggggta gaaccgctcg ttccgggtct
     1921 cgagcgcagc aaggagctcg aaatccataa ccacagaccc gtggtgatgg atccaggctc
     1981 gccgctttac ggcgtcccag aatgacggat aaccttcacg ccgcctttgc caccccattg
     2041 gcgcgaaggg catgcacgga gaagtagttc cgtccatcga caaacgttgc ggcgttagtc
     2101 cagccagcgc cttgggcgtg gctgcggaat gcctcgacgg tatatttgta gctgttctcg
     2161 gtatggatgg tctcgccacg gcggaagtcg aacaacttac cgcaggcagg tactttttgc
     2221 cgtgccaagc tgacgagatg catctcgata cgatgttgtt cgcgattgta gcacgcgctg
     2281 tgatggaaac ccgcaaggtc gaacgcaccg cccaactcgc gattgatacg tgcgagcaga
     2341 ttgagattga aggctgccgt gacgccggcg tcgtcgttat aggcggcggt gagtatgtcc
     2401 gggtccttga ctagatcgac gccaacgatg aacagcgcgc cgggtccgag caacgcggcg
     2461 gcgtgatgca gcagcgtatc ggcctcgtgc ggttcgaaat tcccgatggt ggaaccggga
     2521 aaaaatccga cgcgcggccg agcgccaagc tccgccggca gcgggaacgg atgagtaaaa
     2581 tcagcctcga ccggcagcac ccgcaggtca ggcatttcgt gccgtaaccg cgccgcttcg
     2641 gcggcgagga acgcgccgga tatatcgacc ggcacatagg cagaaacatg cggcgccgcg
     2701 cgcaagagaa tgcgcgtctt cgccaacgaa ccggcaccga attccaccat cgcggcgttg
     2761 gcgggtatca atgccgcgat gtcgcccgca tgcgcttcaa ggatgccggt ctcggtgcgg
     2821 gtcagatagt attctggcaa cgcggtgatg cgttgaaaca gctccgatcc gatctgatcg
     2881 taaaaatatt tcggcggtag ttgcttgggc tcggccgaaa ggcctgccag cacgtcgtcc
     2941 aagaaggcct gcccgacatc gttgacgaca agcgggcgcg gcttcctgac gacgatgttc
     3001 atacccattc tccgatcaag ggattgacga aaggcggggc ttaaagcggg aaatcggcaa
     3061 gccgcagccc ggtgaactgc cagcgcgcgg ccggatgaaa gaaattgcgg tagctcatgc
     3121 gagcatgtcc cggcgctgtc gcaaccgatg aaccacgcag caccatctga ttgatcatga
     3181 actttccatt atattcgcca agcgcacccg caatcggccg gtaagccgga tagggcgcgt
     3241 aggcactgcg cgtccactgc cacaccacac cgcatgcgtc ttccaactct ccggcgcgcg
     3301 ccgcgacctc ccactcgaat tcgctcggta gatgcttgcc ggcccagcgc gcgaaggcat
     3361 ccgcttcata atagctcgtg tgactgacgg cacgctcctc gtcgatcggc agcaacccac
     3421 cgagcgtgaa cgtgcaccaa tttccgtcga tttcacgcca atttccgggc gccgaccagg
     3481 cttcggccac gaccgtggcc caaccgtcgg acaaccacaa ttccggacgc gcgtaaccgt
     3541 cgtcgcgcat gaacgcgagc cattcgccat tggtgacgag gttgcgggcg agccgcaccg
     3601 ggccgaccag agcacggtgc gctggggttt cgttgtcgaa gcaaaacccc tgggtctggt
     3661 gcccgaccgt gtgaatgcct tcgggcaagt cgtaccagtc attgcggcgt gcggcgcatt
     3721 gcggccaacg ccaatcggga tcgaagatcg gcgctgtggg attttctgaa aatgcgtgca
     3781 gaacgtccgt cagcatcagt tcctgatgct gctgctcgtg atgaaggccg atctccagta
     3841 ccggcatcac gcgagcgaga acctccggag ccgcattggt gagcagactt gcaatcgcgg
     3901 cgtcgacatg ggcgcgatag cgggcgactt cggcgacatc cggccgggtc accaacccgc
     3961 gcttgggccg cgcatggcgc ggaccggcgg cgacgtaata ggaattgaac aggaacgcga
     4021 aacgcgcatc gtaaccgcga taggacggcg catgcggaac cacgacgaat tgctcgaaaa
     4081 accaggtcgt gtgggcacga tgccacttga tcggactggc atcgggcatc gattggatga
     4141 cttgatcctc cggcgacaac gtcgcggcgc gtcgttcggt ctcggcgcga acggcccggt
     4201 aggtttccaa ccaaacgtcg cgggcggcgt cgccatattg cgtcggccag aatccccccc
     4261 gttgacgcaa cggcgcctga cgacgaggct ccctgtcgtc ccttagctgc atcgtcagac
     4321 cgtcaaccga aatccaaatc gagcagataa gtacccgccc acctcattgc aataccttca
     4381 tttgcggccc ggatggaacg attgctcttt cgcgatcccg aaatccagga gttcaggtgc
     4441 gcttgccatc gcaatcccgg atgaagggag ggtgaagagc ggtccttcat ccggactacc
     4501 gctcaaaatt cctccaacac ccgcccgcag ccgtaaacgc gatcctcgac gccgcattgg
     4561 cgcagcgcat gccagtaggt cacggtattg atcgcgagca cgggcttgct gagccagcgt
     4621 tccgcctcgg cggccaccgc gaccatcggc aacgccgtgc cgacctggag cagcgcctcg
     4681 acgtcggggc cgtcgagttc cttgagcgcg gtgcggatat cggcgagcgg aacctgcgcg
     4741 atcatgcgcg gcgtcgtgac cgcgaggccc ttgagccgca cgacgtcgaa atctgcttcc
     4801 cgcagatacg cccgcacgat ctcgtcgccg cgcggctggt gcggcgtaag taccgcgata
     4861 cgctgcaccc cgaacgccct gagggcggcc actgccgcgg tcgagcccat cgagatgtcg
     4921 acgcccgcac tcgccgcgag cgccgcctgc agcattgagg cagcagcgac gccaccccag
     4981 aaggtctcca gcgcgatgcc gatgatgatg tgatcgaggc ccgccgtcat gatctggtcg
     5041 attgccgccg tcatgccctc gcgcatcatc tccatatgct cggagaaggc ttgctcggtg
     5101 ttgagcggtc gctccttgat ggtggcgcgt gcgatgtgat tggtgatgcc gcgcggccgc
     5161 aacagctcgc attccggctg caccgtggtg ttggtgctcg gcaccacgat accgatgcgt
     5221 ttgcgataac cgagggtatc tggcaccggg gcgctcccgt ccttggcgtc accgcaactg
     5281 tcgcgaaact gccatcccgg gatggacgtg gctacgaaaa atattctggt cagccggaac
     5341 ctgaagcgcg tgcttgatca cgatggtagc cgcagtggcc gcgcagattg gatcaggggt
     5401 ggtaaatcgg agactttttc aacaggtgtg acctcggaca cagggcgctg gcgttatgct
     5461 ctgctagttc tacttgggtc agtcgaatcc gaggccacgt tcaccacatc gcgtctggcc
     5521 ttgattcgca tgcgtcatgg tttcccccgc gttcatttcc gcgatttgcc gcccatcctt
     5581 cgcacaattc ggcgcaggaa atcatgacgc acgagatcaa cggattcgcc atcgagccct
     5641 gcggcggcgt tcgtcacctg ttccggcgta cagctgagcc gaggcacgag tacattttcg
     5701 aaatcacttc gaatcgcgtc gcgctgcgcg ccaccttgcc ggatgatgcc ggtattgatc
     5761 gtaaaaaggc tctggatgac gcggaccgtt ccgaaaaaga cgcctggaac gcggccaagg
     5821 agttccaacg ccgggtcttt gactgaggct gcgagcttcg cgacgcgcta gagcttgttt
     5881 cgatcacatc gaagcacttt ccgacggtca tggccgggct tgtctcgcgt cttgcccacc
     5941 gagatgccgc aagaaagacg tggatgcccg tgacaagcgc ggccacgggg gagcgatgat
     6001 acgcatgagc gggcccgccg ccatattcgg cagggtcatc ggaacagagg cagacaaccg
     6061 gttgcgaccc ctcgcattac aatccagact acctcacaaa gcaaacgcag gcatgacgaa
     6121 acattatcag taggacatca ccatgcccca catcaccacc gacgacggcg tcaagctctt
     6181 ctaccaggag gcaggcgccg gcattccgat cgtgttcgtg cacgaattcg cgggcgacag
     6241 ccgctcgtgg gaggcccagt tccgtcattt cggccggcgc taccgctgca tcgcttacaa
     6301 cgcccgcggc tttccgccct ccgacgttcc cgaacgcgtc gagcgctact cccaggcacg
     6361 cgcccgcgac gacatccgcg ccgtgctcga cggcctcaag atcgacaacg cccacattgt
     6421 cggcctttcc atgggcggat ttgcgacgtt gcatttcggc ttcacgtatc cggaccgggc
     6481 gcgctcgctc accattgggg gctgcggcta tggtgcggct cccgaccaac gcaagaaatt
     6541 tatcgaggag gcggaggccg ccgccgcgcg cttcgagaac atcggcatgg ccaaagccgc
     6601 tgaagcctac gcgctcgggc ccacccgcgt gcagttccaa aacaaagatc cgcgcggctg
     6661 gcgcgaattc gccgatcaac ttgccgacca ttccggcaca ggctcggccc tgaccatgcg
     6721 tggcgtgcaa agccgccggc cctcactcta tgacctcacc gcggacatgc agaagataac
     6781 cgccccgacc ctgatcatga cgggagacga ggattgggcc tgcctggagc ccggcatcct
     6841 gatgaagaag atgatcccca gcgccggcct cgtggtgatg ccgaattgcg gccacgccat
     6901 caacctcgag gacccggatg cctacaaccg gcatctggat gactttttcc atgcggtgga
     6961 attgggcagg tggccggcac gcgatccccg cgcggtggtc gctaccatat tgggaagata
     7021 gaatctgatt gggaagatcg cacgaagcga tatagtgagg ttgtcatgtt gttcggacag
     7081 ctcgcgctga tcgccgccgc ggcgtttacg ggcgccgcga tctacatcaa cgtcgccgag
     7141 cagccggcgc gccttcaact cgatgagcgc gcgctgctca ccgaatggca gccgtcctac
     7201 aagcgcggtt tggccatgca agcgccgttg gcgatcgtcg gctttctgtg tggcgctctc
     7261 gccgcttggc aaacggcaaa ctggtggtgg cttggtggtg ctctcgtgct cgtcgccaac
     7321 tggccgttca cgattttcgc gatcctgtcg acaaacaacc agctcatggc aatggacccc
     7381 ggcgtcgcca cagcggaggc tcgcaggctc atcgagcact ggggccacct ccacgcagtg
     7441 cgcagcgcgc tcggggccat cgccgcattg atatttctga tagcctccgt gtcgagcgtc
     7501 tgaccctgat tgcgggcgtc ctaccggtgt gcacgaggca cgcgcagtcc ggtcaatcca
     7561 aggagcaagc catgtccgaa ccgatctgga accaattcct caccgaacgc gataaggcgg
     7621 tattcgccac ctcgggttat ggcgcccgcc agggcttcag caagcggccc gcgctgctcg
     7681 tcatcgacgt caattatgcg ttctgcggcg acaagccgga gccgatcttg caatccatca
     7741 agcggtggcg caactcctgc ggcgaggatg cctgggtggc gcttccctac atccgcgccc
     7801 tgatcgacaa ggcccacgac aagggcctgc cggtgattta caccaccggc gtgcgccgcg
     7861 gcgatttgtg ggattccgga agctgggcgt ggaagaacaa ccgctccgcg gaggatgccg
     7921 ccaacaagac tgtgacctgc aatctcgacg gcaacgagat catggccgag atcgcgcccg
     7981 gcccgcagga catcgtgatc tacaagcaga agccgtcggg cttcttcggc accaaccttg
     8041 caagttacct gacgctgctc gcctgcgacg gccttatcat cgccggcacc accacgtcgg
     8101 gctgcgtgcg cgcgagcgtg ctcgacgcct ttagcctcaa ctatcgaatc accttggccg
     8161 aagaaggctg cttcgaccgt gcccaggcaa gccacgccat caacctgtgc gacatgaatg
     8221 cgaaatacgc cgacgtggtc aagaccgccg aggtgttggc cttcttcgac acgctgccca
     8281 agggcatgtt cgacctgccg aaaggggtga cggcgccgga gccgcatccg atgcgaaagg
     8341 cggcggggta ttgaggaggc cggatggagg gacccgccgc ttcgcggtcg cgtaatctgg
     8401 agccggcgga gccgcaggct ttccccgcat tacgcgccgc aagagggcgc tccatgcgga
     8461 cgtgcccgct caaaaatccg gcttatgcgc cgttgggatt ggttcgatgt cgtagttgaa
     8521 aaacttgtcg ttgttctcgg cgcaaacttg ctcacccatc gggccctgtt cggcgcggcg
     8581 ataacgctgg acagcggtcc acggcatcgt gaacgcgcca ggatcgtcga ctcgtgcggt
     8641 cacttccagc gccttgccgt tttcgacgat gcgaaagcgc tcgaccacat gcaattgctc
     8701 ggtgtgcggc gtgcggtagc tgtcgacgaa agtccgggtg ttgagcccga tggtgtcgac
     8761 cacaagtgta tcgccgttct cgtaatggcc gatggattcc ccgaaccacg acggctttgc
     8821 atccggcgaa tgttggtcgg tgagatagac acggcgcacc atgtgatcct cctcccagat
     8881 catgaccacc tgtttgggag tttggaggaa ataaaccggc gtgaccggat agagcaggaa
     8941 acccggaacg ccgatcggcc agcatctctc cttgggggtc cacaacatcg tctcggtcag
     9001 cgcccgttga ttgagctttc ttaattcctc tttgacccag ggttgcaaga tcggattgct
     9061 caaatcggca acgcggtttg tcgattgctt gcccgatcgc ctcgcggcgc gattgtcgac
     9121 ataaggatgc gctttgtcga aggtgaccgg ccccggccct gatggcggct gcaggaattc
     9181 gtcgccgatc ggcgtctcgc catcgggcac gccggcgatc catccggtgc gactgtccgg
     9241 cgagaagtta ggcaccgcgc tttccgcacc aatggccggc caaccgagca tcgcggcagc
     9301 gaaaacgcca gcgatcgggc ttcgtgacct gatatttgcc atgtggggca tcgtgtttcc
     9361 tccatcggtg accacgcctt tgtgattgac aggcattcta tcgcaaacga catcgtcgga
     9421 gccattatac gatcatggca ttgcggcaca ggccatggtc tactaagacg ctacgagcgt
     9481 agccggatga agggatcgcc tcttcgcggt cccgcaatcc gggacggact actggcactg
     9541 ccggtcccgg attacgtgcc ggaagaccga cgctagctcc gggctacgac caactcaaga
     9601 ggtcatcatg tactccaacg tcaacctctt catcgacggt gcgtggaaac cggccgttgc
     9661 cggtaagacg ctgtcggtcc tcaacccggc aaccggcgag gaaatcggca ccgtggcgca
     9721 cgccgagaag gccgatctcg atctcgcact tgcggccgcc caaaagggct tcgagacgtg
     9781 gcgcaaggtt tccgcccacg aacgctatcg cctgatgcgc aaggccgccg acatcctgcg
     9841 tagccgcgcc agcgacatcg caacactgat gaccatggag cagggcaagc cggtggtcga
     9901 agccaagatg gagacggcga tcggtgccga tatcatcgac tggttcgccg aggaagcccg
     9961 ccgcacctat ggccgcaccg tgccggcgcg ggtcgacggg gtctatcagc ttgaaatgaa
    10021 ggagccggtt gggcccgtcg cggccttcac gccgtggaat ttcccgatca accaggcggt
    10081 gcgcaagatt tcatgcgcgg tggcggccgg gtgctcgatc atcatcaagg gcccggagga
    10141 gacgcccgcg gcgtgcgccg gcctcgttga tgcattcgtt caggccggca ttccggccgg
    10201 cgtgatcaac ctggtgtttg gtgtgccgtc ggagatttca gcctatctga tcccgcatcc
    10261 gatcatccgc aagatctcgt tcacgggctc gacggcggtc ggtaagcagc ttgcggcact
    10321 cgccggtgct catatgaagc gcgtcaccat ggagcttggc ggccacgcgc ccgcaatcgt
    10381 gttcgcggat gccgacctcg atgcggccgc gaagattctg agtgccaaca agtaccgcaa
    10441 cgccggccag gtctgcgtgt cgccgacccg cttcctggta cagcagccgg tctaccagca
    10501 gttcgtcgac aagttcgcca ccgccgcgaa atccatcaag gtcggcgacg gcctcaagga
    10561 agatacccgt atgggcccgc tcgcccacag ccgacggctc gacgccatcg agggcttcgt
    10621 caccgacgcg gtggcaaagg gcgccaaggt tgaaaccggt ggccggcgca tcggcaacaa
    10681 gggctatttc ttcgagccga ccgtgctcac aagcgtgccg cgcgaggcgc gcatcatgaa
    10741 cgaggagccg ttcggcccgg tcgcgatcgt caatgccttc gacacgttcg aggaggtcgt
    10801 cggcgaggcc aaccgcctgc cttttggcct tgccgcctac gcctatacgc gctcgaccaa
    10861 gacggcggaa gcgattggcc acgccatcga gagcggcatg gtgtcgatca accaccacgg
    10921 cttggcgttg cccgaggtgc gcttcggcgg cgtcaaggat tcaggtttcg gcagcgaggg
    10981 cggcgcagac gcactcgatg cgtatctcaa caccaagttc atcacgcaga tgaatgcgta
    11041 agaggcggcg cgtaacccgg atggagtgca gcgtaatcga ggaatagcgg tgccagatgc
    11101 gagtgcggtt cccgcattgc gctgcgctcg aggcgggcta cagctccgcc tcacatccgt
    11161 agcgcctgct cggccggcac atagggcagt ttgagcgcat ccgccacggc cttgtacgtg
    11221 acgcgcccct cgtggacgtt gaggccggca cgtagatgcg ggtcctgtcc gagcgcgatc
    11281 cggtagccct tgtcggcaag cgcgatcaca taaggcagcg tcatgttatt gagcgcgaag
    11341 gtcgaggtgc gggcgacggc acccggcatg ttggcgacgc agtaatgcac cacatcatcg
    11401 acgatgtagg tcgggtgcga atgggtagtc ggccgtgagg tctcagcgca gccgccttgg
    11461 tcgatcgaca catcgacgat cacggcaccc ggcttcatcg cccgcacggt gtcggccgtg
    11521 atcagcttcg gggccgtcgc ccccggaacc aacaccgtgc cgatgaccag atcagcccgg
    11581 cgacacaggg tctccaccgc gtctcgggtc gagaacacgg tctgcacgcc gctcaacgta
    11641 ttgtcgacgc gccgcagcac atcggggtta cgatcgacca ccgtcacggt ggcgcccatg
    11701 ccggcagcga tgcgggccgc attggccccg gcaataccgc cgccgagcac gagcacgtcg
    11761 gcggccggca cgccgggaac gccgccgagt agcacgccgc ggccgcccct tgccttctca
    11821 aggcaatggg cgcccgcgtg aggcgccatg cggcccgcca cctccgacat cggcatcagg
    11881 agcggaagcc cgcccagagg gctggtcacg gtctcatagg caatcgctat gcagcccgac
    11941 gccagcaggt cctccgtctg ggcacgatcg ggggcgagat gcagataggt gaacagcacc
    12001 tggccgggcc gcagtttctt gcgctcggcg gcgagcggct ccttaacctt cacgatcagt
    12061 tcggcctgcg caaacacctg gtcggcgccc gccgcgatct cggcgccggc cgccacatag
    12121 gcatcatccg tgaggccggc accgacgccg gcatccttct cgatgaatac gcgatgacct
    12181 ttgagcgtca gttcgcgtac cgtggacggc accagcccca cccggtattc gcagtccttg
    12241 atctctttag gtacacctac caacatcatt catctcccgt ggggtcattc cggcaccata
    12301 ggaaaaacca ataacgcaat aaggaaaaaa tgcggcagcc aagttccgtc aagcatgtat
    12361 gctgtcatcg cgtcctcgcg atgcggcacg cgggcgcgac aatggagaag ttcattcgat
    12421 cacaccggaa cgcgatccaa aaaacgcgta cgcaaaacgg agggacgtca atgttcgggg
    12481 gcgcagggcg ttcgccgcaa gtgcgaccca attacggctt atacgagatt cggtgcggca
    12541 cgcgaaggtg tttagcgctt tgcgccgcat tcctggcgag cctctgcatc gtcaacgccg
    12601 ccatggcggc cgatcgcatt cggatcgcgg cgcaaaaaac cggcacgctt gcctgggagc
    12661 tagagatcat caatgctcat ggcctcgaca agaaggccga tctcgacatt caggtggtgg
    12721 aactcgcctc cacggaagct ggcaagatcg cactgcgcag cggctcggcc gacctgattg
    12781 tgtcggattg gctgtgggtc gcgcgcgagc gctcgctcgg cgacaatctg gtattctttc
    12841 cctatacgag cacgctcggc gccgtgatgg tgcctgggaa ctccaccgtc agggacctcg
    12901 ccgatctcaa gggcaagaag ctcgcggtcg cgggcggccc gctggacaag agctggctta
    12961 tgctccaagc ggtcgcgcgc cgtgacggcc tcgatctcag gacccaggcg actgtcgtgt
    13021 atggggcgcc acccctgcta tcggagaaag cgttgcagcg cgagaacgat gcaacgctga
    13081 cctactggaa tttctgcgcc gagctggagg gcaagggatt caagcgcggc atcgacatgg
    13141 aagcgattga aaaacgtctt ggtgcatccg gaccggttgc catggtgggt tacgcgttcg
    13201 atgccggctg ggcggcaaag aatagatcca ccatcgcccg cttcctcgac gccgctgccc
    13261 aggcgaagga gatccttgcc aactcgcaag ccgagtggca gcggctggcg ccgcgcattg
    13321 gcgtcaatga cagcacgggc ctcgaaatct accgccgacg ctatagcgac ggcattccgc
    13381 ggcgcccgat ccgggacgag gaacgcgacg ccatgaagct ctatcgtgtg ctggcggaga
    13441 tcgacgccgg cctgatcggc gcggcgcgag acctggacag ggggatgttc tacgatccgg
    13501 ggaagcttga ttgaacgcgg cgttgcggct gttctccctg atcctgctgg ttgcggcctg
    13561 gtacgccgga tcggaaatcg ccggtcagcg tttactgccg ggcccccaga cggtcggccg
    13621 caccctgttg gccgaggcgc aatcgggtgc actggcgttt cacctcggcg cgacgttggc
    13681 ccgcgtagcg gtggcattcg tcatcgccat ggcggccggc accgcgctcg ggatatggat
    13741 gggccgttcg cgcctcgccg accgcttggc tgatccctgg ctggtggcac tcctcaacct
    13801 gccagcgctt gtcatcatcg tgctcgccta tgtgtgggcg ggactcaccg aaaccgccgc
    13861 catcgcggcg gtcgcgctga acaagctgcc caacgcgacc gtcaccgtgc gcgagggcgc
    13921 ccgctcgctc gatcgccagc tcgatgaaat ggcacaagta ttcctcatga gccgctggac
    13981 acgcctgcgt cacgtcctta tcccgcagct tgcgccctat ctggcggccg cggctcgctc
    14041 aggtctctcg ctggtctgga agatcgttct gatcgtcgag ctccttgggc ggtcgaacgg
    14101 cgtcggcttc gaaatcggga tcgcattcca gctgttcgac gttacgcgca tcctcgccta
    14161 tgctatcgcg ttcgtcctcg tcatgctggc gatcgaaaca ttcttggtgc agccgattga
    14221 acgacatgtc tcccgctggc gacccagggc agcttgacgt cagcattacg cagaaatctt
    14281 attccgcggc gtcgggcggc agcattgagg tgctgcgcga cttagcattc acccttaagg
    14341 ccgggacggt cggtgccctg gttggaccgt ccggctgcgg caagaccacc ctgctacgca
    14401 tcatcacggg tcttgattcc gactacgtgg gcacggtgcg tctgcccgac cacggcaagc
    14461 tcggcatggt gttccaggag ccacggctgt tgccctggcg caacgtggaa cagaatctcc
    14521 gcctgggggc accggaggcg accgatgccg aactcgacgt cctgttcaag gtgctgggcc
    14581 tcgccgccca tcgccatcat ttcccgggcg aattgtccgt cggccaagcg cgccgggtcg
    14641 cgctcgcccg cgcctttgcg gtcaagcccg acctgttggt gctcgacgag cccttcgtgt
    14701 cgctcgatgc ggcgctcgcc aagcatctac aggaagaact cgcctccctg gtgacgagcc
    14761 gtcacgtcac caccttgctc gtgacccaca acatcgacga ggcgatcggg cttgcggact
    14821 ccttgttcct gctatcggca agccccgcgc acgtgatagc cgaagtgccg atcacacaac
    14881 cacgcacgcg gcacaatgcg gaggaactcg ccacgattcg tgacgagatt gcgcggcggc
    14941 tggcgaaagt tgccaagtga cgggtcgcca tgtggaacac aacgccggac gtcatgaaat
    15001 gccatttcgg cccgggggca cgcgcggccg cctctgcttg cacaaactcg cagagcaggg
    15061 cgtccgcgct gctctaatgc ggttgggcat ccgcggcatt ggcctgacga cgccgttgca
    15121 acatgttttc tgccacgccc caacgggtcc aacctggcaa tgtggcctcc aaggtgacgt
    15181 cacgccactt cggatgccgc ggcggttgct ggaatttgtc aaagttcgtg aagaaccttt
    15241 ccacgaacct ctgcacgcgg tggtatcgat cggaattctt cggccaattg actaccgcaa
    15301 gcactgccgg caccgcgacg gtgttaatca cctgaccggg cggaacgagc gtcggatatt
    15361 cctggctcgt aaattcgccc tgcgcatagt aatcgccgta actcttggtg aactcaatcg
    15421 gcaccaaatg aagtcccgaa ttctccggca tcttcgcgaa gaaatcgatt ggcttgctga
    15481 tcacgcgaat aagcgccgcg atttcgccgg ctctaagctt ttgcagcgcc agcggattat
    15541 cgaatagcgt cgcctcaact tgcacgccgg cccgttgaaa tacgatcgct ccggtcaggc
    15601 tggatgcgct gcctgccggt ccgaaattga ccttcttgcc ctgcaaatcg gcgatgctgt
    15661 tgacgtccgt gcgcgccagg atgtgcattt ccgacagggg tagacggacg atgtaattga
    15721 cacggctttc aagattggcg gtcctgcgct gcgtgcggaa atactcaaac acgtccgatt
    15781 gcgtgacagc cacatcgatt ccgcgcaaat agagaagatc gtcgagattc gaggcggccc
    15841 cgtaggtgac gatcgggatg atgcgcagat tgtctccgtc atcaaggact tgcgccattt
    15901 catcggcgaa catcatgtag ctgccggaca gtaagccgcc tgccaccccg accgtccact
    15961 ggttcttgcg cagtctaagt tcggactccg acccgcccgc ttcgagggat ttcggtatgg
    16021 cttgcgcgtg cgcgggcgtc ggaaaaccta gattgcgcgc gccaattccc aacccgacaa
    16081 ctgcgaatgc cgcgaccaac gataatgcca tcggtaattt ttggatatac atcttagtcc
    16141 cttctcgaac cgaagacatt aaaatgactc cggagcctgt gaatactgtg agacgagtga
    16201 gattgtttcg atgaccagcc aaaatatcgg tcaagttacc cccgtagttt aagctgggta
    16261 gctttctttt tctaacgatt acttgggtgt cttcttttaa tgatggaagc cgtcttctaa
    16321 tgactattag acccagccgc catcagctca atgacgtcgc cgtctgtcaa ttttgtgacg
    16381 gcttggtatt tgttgagatt ctagactttc aaactatcgc tatggcctct gcggtcgaac
    16441 gacgggtaac ttggcgatat ttgactgatc atcggttgcg ttcactgctc tgcctcagac
    16501 gcgtcgggaa atgacctcaa gacaggggat ccccgcatgg gcggcacgtc atcaccgaaa
    16561 ggcacgtgca agccggcgac aaattgattt gcaaggtcga cgtaatgacg atgtcgcgaa
    16621 gcgtggtctt ggctgggtta gtaggtctaa agcgtacgaa ccgccaacgt ggctacttcc
    16681 gtatgatcgg cgcctttggc ggcgtctcgg tcagagctgc cggtgagatc gcgaaggtga
    16741 gccatgcgct ccagccggag gcgcgattct ctgcgtcgaa atctttgtag cccttcaggt
    16801 tcaagtaccc ctgaaggttt cccatcgcaa tgacataccc gatctgcggc ccgattccga
    16861 gggtacgaga ctcaaagcat ccgacagggt tgccggcgcc tgtatcgcag gagatttgct
    16921 gataggcata tcccaccgcg ccggtctgta actgcttcgt cacgaacttg gatatagcca
    16981 gatcgaggtg cacgtcgacc cggttttgat attgcgtacg cgcattctca aaatcgcaag
    17041 taaatccgag aaccgcggaa aactcgttgc ccgtttgcgg gttaaaatat gtgtatcccg
    17101 cgccagcatc cacggcttga tgacctagtc caagatatgc caagcgagcg gggtcatatc
    17161 gcccgatcgg gatgttggcc gagacatagg tcatgtaatt g
//
LOCUS       DATILV010000557         8738 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1412342, whole genome shotgun sequence.
ACCESSION   DATILV010000557 DATILV010000000
VERSION     DATILV010000557.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8738
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1412342"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1274
                     /locus_tag="VLJ17_12925"
     CDS             <1..1274
                     /locus_tag="VLJ17_12925"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HAMP domain-containing methyl-accepting
                     chemotaxis protein"
                     /protein_id="HSV23919.1"
                     /translation="AVAYRQIETNKQVSLTLQFGFAVIAAAALLLGLMLVRGALIRPL
                     LELKTLMQRIAGNDLAGAIPGLARHDEIGDMARTIEVFRNNAIERQKLQASGEAMREQ
                     EAQRNKELEKLVQEIRTTRAQEAERNNTLERLIDKFRGTVTNVISLLGNETAAMRGAA
                     AALGNVASIAADKASKAASASQGAAGNAETVAAATEQLGSSIKEISGRAQRASAIVSE
                     AAASANASDRDVQGLADAVVRIGAVTEIISTIAEQTNLLALNATIEAARAGEAGRGFA
                     VVANEVKQLAGQTAKATQEISGQVSGIQASTTTAVHSIRAIAAKVGEIELLNTTIAAA
                     IEEQEAATQDIARNVALAAEGSRSAVTSVGAVTTVAAETNQEANRVLGASGTLSNIAT
                     ELSHNVETFLAAITSDLAERRRAERHESNVA"
     gene            complement(1366..2229)
                     /locus_tag="VLJ17_12930"
     CDS             complement(1366..2229)
                     /locus_tag="VLJ17_12930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23920.1"
                     /translation="MLQRNSIVAIAVTALWLTMAGAPRSAVAHDESKYPNWTGQWVRV
                     PDGGPPRYDTTKPIRKQEAPLKPEYQTLYQTSLNDIDAGGFGLDTHYACMPTGMPRQM
                     SGVSRFEFLFGSNVTHILFEDMTLSPRRIYTDEREWPKDLNVREPTFVGHSLGKWLDT
                     DGDGSYDTLEIETRHVRGPRTWDQTGMPMADDNEAVFKERIYLDKSNPNILHNEITTT
                     DNSLTRPWTVTKNYRREQTITWEENNCVEGNAYITINKQVYVVSGDGHLMPAKKDQPA
                     PDLRYFKQTRK"
     gene            2372..2722
                     /locus_tag="VLJ17_12935"
     CDS             2372..2722
                     /locus_tag="VLJ17_12935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23921.1"
                     /translation="MSAHNLNPALRPAVTQAAPNTGQLVAGAQMQAGVVVKLAIEAII
                     EASEQPVQHAIANIFSPFLPLFDDRISQFRFDCSAGSTQGGDGRDVRQSNKTCGCFSQ
                     LQSRLETDSESRLD"
     gene            2824..3936
                     /gene="ccmI"
                     /locus_tag="VLJ17_12940"
     CDS             2824..3936
                     /gene="ccmI"
                     /locus_tag="VLJ17_12940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcmI"
                     /protein_id="HSV23922.1"
                     /translation="MTLWSILLLMTAAALSAVIWPLARPRTLRAAGSDLAVYRDQLEE
                     IERDRADGRIGHDEFEAARIEVSRRVLGAASAGPGTPESAPSGRRRIAALVGAVIAVL
                     LIAGSLYTLLGSPNLPGESIASRDPGAEQANSIAALIARIETHLKENPKDGRGWEVLA
                     PVYMKLERYDDAVQARRNALSLLGVTPEREVDLGEALASAAGGVITADAKAAFERAVA
                     LAADNVKARFYLGLAAQQDGNGGEAARIWRDLIATAPANAPWLAMVRQSLARVERPGA
                     TSPAPRPDDIAAASEMTPEGRNEMIRGMVERLATRLHEDGSDVEGWLRLLRAYMVMGE
                     RDKAKAAVGEARGALAREPEKLKQLDEGIRDLGVEG"
     gene            3946..4413
                     /gene="ccmE"
                     /locus_tag="VLJ17_12945"
     CDS             3946..4413
                     /gene="ccmE"
                     /locus_tag="VLJ17_12945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HSV23923.1"
                     /translation="MTRKQRRFAMIAGGVSVLAVAVFLVLFAMKDAIVFFNSPTDVVE
                     KHVAPGARIRLGGLVAPGSVTRGDALAVRFEVTDGNRAIAVTYQGVLPDLFREGQGVV
                     AEGVLDGAGVFKADNVLAKHDETYMPKEVADALKKQGHWKDEYDNKKSSAIRQ"
     gene            4510..6492
                     /locus_tag="VLJ17_12950"
     CDS             4510..6492
                     /locus_tag="VLJ17_12950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008135090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase CcmF/NrfE family subunit"
                     /protein_id="HSV23924.1"
                     /translation="MIAEVGHYALVLALALALIQSVLPLIGARIRDSALMAVAEPAAL
                     AQFGFVALSFVMLVACYVASDFSVRNVFENSHSAMPLIYKFTSTWGNHEGSMLLWVLI
                     LSLFGALVAAFANNIPHSLKATVLAVQAWVAATFELFILVTSNPFLRYASAPLEGRDL
                     NPVLQDLGLAIHPPLLYLGYVGFSISFSFAIAALIEGRIDAAWARWVRPWLLTAWMCL
                     TVGIAMGSYWAYYELGWGGWWFWDPVENASLMPWLVGTALLHSAVVMEKREALKIWTI
                     LLSILTFSLSLIGTFLVRSGVLTSVHAFASDPLRGIFILAILVVFIGGGLALFAWRAP
                     LLRQGGLFAPISREGALVFNNLLLTTACATVFVGTLYPLALEAVTGEKISVGAPFFNA
                     TFGPLFATLLVVVPFGPLLGWKRGDLGGVAQRLSGAFLVALIGLAATFVVEGKPLLAP
                     FGVGLALFVITGAVTDLSERIGFLRTPLATVMRRAAGLPRSAWGTAFAHLGLGITLLG
                     IVGETQWGAERIVSLRPGDKVTIRNYDVTFDRTVNRTGPNYAELAAAFTVRRHGEVIG
                     VMEPAKRSFASRGTVTSEAALMARGVSQLYLSLGEVNPDGSATIRLYYKPLVLLIWLG
                     CVVMFFGGGLSLSDRRLRVGVPRSARAKAAALAPAE"
     gene            6501..6968
                     /locus_tag="VLJ17_12955"
     CDS             6501..6968
                     /locus_tag="VLJ17_12955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008135088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein"
                     /protein_id="HSV23925.1"
                     /translation="MRRWRFALGGLALLAAQAAVAVQPDEILKDPALESRARALSRVL
                     RCMVCQNQSIDDSDAPLARDLRILVRERLTSGDSDSQVVDFLVVRYGEFVLLKPRIAW
                     HNAVLWLTPAVALVAGAIAMLVAIRRRRAAASGAVPLSSDEERRLAEVIDPAP"
     gene            7155..8702
                     /locus_tag="VLJ17_12960"
     CDS             7155..8702
                     /locus_tag="VLJ17_12960"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Do family serine endopeptidase"
                     /protein_id="HSV23926.1"
                     /translation="MSLHAPRDVGHRLFSKRRIVLLATVAGLGAGMLFADFGTVTRNS
                     TGNTIFAPPYARAQSAQRPVGFADIVEKVKPSVISVKVKVNAGEGLVLNEDNPLRGTP
                     FEEFFRRFGQPDTTPRFGRPDGDRQGSRPQRRQYTMGQGSGFFISADGYAVTNNHVVD
                     KAEQVEVTTDDGKSYTAKVIGTDARTDVALIKVEGRHDFPFVHFAEDSPRIGDWVLAV
                     GNPFGLGGTVTAGIVSARGRDIGAGPYDDFIQIDAAVNKGNSGGPTFNVDGNVIGVNT
                     AIFSPSGGSVGIAFDIPAETVKVVVAQLKDHGAVTRGWIGVQIQPVTSEIADSLGLKN
                     ARGALVAEPQASSPAQKAGIKAGDVIVSVNGEAVVDARNLARRISAMAPGTSVKLGIV
                     RGGKEDTLTLTLGELPKERQARADTDERSSSRGVDVPKLGLSLAPARNGGEGVVVTEV
                     DPNGSASDHFQTGDVILDVNGKAVSSPADVRKAVSEAQSDGKRSVLMRVKSNQGTRFI
                     AVPIGNA"
BASE COUNT         1540 a         2619 c         2824 g         1755 t
ORIGIN      
        1 ccgcggttgc ctatcggcag atcgagacca ataagcaagt gagtttaacg ttgcagttcg
       61 gatttgcggt gattgcggct gcagcgctgc tgctcgggtt gatgctggtc aggggcgcct
      121 tgatccggcc gctgcttgaa ttgaagacgc tgatgcagcg catcgcggga aacgacctgg
      181 ctggggccat tccgggactc gcccgtcacg acgagatcgg cgacatggcg aggacgatcg
      241 aagtattccg caacaatgcc atcgaacgac aaaagctgca ggcctccggc gaagccatgc
      301 gtgagcagga ggcgcagcgc aacaaggagc ttgaaaagtt ggtccaggag atccggacca
      361 cccgcgccca ggaagctgaa cgaaacaaca cgcttgagcg gctgatcgac aaattccgcg
      421 gcactgtcac caatgtaatc agcttactcg gcaatgaaac cgctgcgatg cgcggtgccg
      481 ccgcggcgct cggaaatgtt gcgtcgatcg ccgcggacaa ggccagtaag gcagcatcag
      541 cttcgcaggg agctgccggt aacgccgaga cggttgcggc ggcgacagag cagctcggca
      601 gctcgataaa ggagatctcc ggccgcgcgc agcgcgcaag tgcgatcgtt tccgaagccg
      661 ccgcctcggc gaatgcctca gatcgcgatg tgcaagggct tgccgatgcc gtcgtgcgca
      721 tcggcgcggt gacggagatc atcagcacca tcgcggagca gaccaatctg ctggctctta
      781 acgcgacaat cgaagccgca agagccggtg aagccggacg cggctttgcc gtggtggcga
      841 atgaagttaa gcaattggcg gggcagaccg caaaggcgac gcaggaaatc tcgggtcaag
      901 tctccggtat ccaggcctcc accacgacgg cggttcattc gatccgtgcg atcgccgcca
      961 aggtcggaga gatcgagctt ctcaatacga cgatcgctgc ggcgattgag gaacaggaag
     1021 ccgccactca agacattgcc cgcaacgtcg cgcttgccgc tgagggcagc cgcagcgcgg
     1081 tcacgagcgt cggcgctgtc acaacggtcg ccgccgagac caaccaagag gcaaatcggg
     1141 tgttaggtgc atccgggacg ttgtccaata tcgcaactga attgtcgcac aacgttgaaa
     1201 cgtttctcgc cgcgatcacc tccgatctcg cggagcgccg acgtgccgag cggcacgaat
     1261 ccaatgtggc gtgacggcgt tcgccaaagc gcaccgtctg cagatgcctg atctcaacga
     1321 tgcggcgccc ggataacgct gattttatat cgtcggtgtg gcgccttact tcctcgtctg
     1381 cttgaaatat cgcaaatccg gcgccggctg gtctttcttg gccggcataa ggtggccgtc
     1441 gccgctcacc acatagactt gcttgttgat ggtgatgtag gcgttgcctt cgacgcaatt
     1501 gttctcttcc caagtgatgg tctgctcgcg gcgatagttc ttggtcaccg tccagggccg
     1561 cgtcagcgaa ttgtccgtgg tggtgatctc gttgtgaaga atgttcggat tgctcttgtc
     1621 gagatagatg cgctccttga atacagcctc attgtcgtcg gccatcggca ttccggtctg
     1681 gtcccaggtg cgcggcccgc gcacgtgacg ggtctcgatc tcaagcgtgt cgtagctgcc
     1741 gtcgccatcg gtatcgagcc atttgccaag cgaatggccg acaaaagtag gctctcgtac
     1801 gttcaggtcc tttggccatt cgcgctcatc cgtatagatg cggcgaggtg aaagcgtcat
     1861 gtcctcgaac aggatgtgcg tcacgttgga cccgaacaaa aactcgaagc gggaaacccc
     1921 ggacatttgc cgtggcatgc cggtcggcat gcaggcgtag tgggtgtcaa ggccgaatcc
     1981 accggcgtcg atgtcgttca ggctggtctg atacaacgtc tggtattccg gcttgagggg
     2041 cgcctcctgc ttgcggatcg gcttggtggt gtcatagcgc ggcgggccgc cgtcaggcac
     2101 ccgcacccac tggccggtcc agttgggata tttggattca tcatgagcaa cggcgctcct
     2161 cggtgcaccg gccatggtca accacagcgc cgtgaccgca atggcgacga tcgaatttcg
     2221 ttgcagcatt gttgtcctcc cggtggcgga aatacggtgc caatcggcgt cctgagttcc
     2281 gcaggccccg tcagcatcta tggggaaaga ttacaccgtc cagacgcaga cgcgaagggg
     2341 ccgcggcgaa gcgacgtcgc cgtgcgttcg aatgtcagcg cacaacctga atccggcgtt
     2401 gcggccggcc gtgacacagg ctgcccccaa caccgggcag ctcgtggccg gtgctcagat
     2461 gcaagccggt gtcgtcgtca agctggcaat tgaggcgatc atcgaagcga gcgagcaacc
     2521 ggttcagcac gccatcgcaa atattttcag cccattcctg ccgctattcg atgatcgaat
     2581 ctctcaattc cgattcgatt gcagcgccgg atcgacgcag gggggcgacg ggcgcgatgt
     2641 gcgtcaaagc aacaaaactt gcggatgttt ttcccaattg caatcccgcc tcgaaacgga
     2701 cagcgagtcg cggcttgatt gaatctttga cgttgcggtg cgaccatcgc ctgtgttgta
     2761 accttggtat tccaagatgg atgaccgcac acatggtctg ttggcctgat ctggttagtt
     2821 gaaatgacgc tctggtcgat tttgctgctg atgacggctg cggcgctcag cgccgtaatt
     2881 tggccgttgg cacggccgcg cacgttgcgg gccgccggca gcgatctcgc ggtctatcgc
     2941 gaccagctgg aggaaatcga gcgcgatcgc gccgacggtc ggatcggcca tgacgaattc
     3001 gaagcggcac ggatcgaggt atcgcgtcga gtgcttgggg ccgctagtgc ggggccgggg
     3061 acacccgaga gcgcacccag cggcaggcga cgtatcgccg cactggttgg cgccgtcatc
     3121 gccgttctgc tgatcgcggg ctcgctttac acgctgctcg gatcgcccaa tctgcctggg
     3181 gagtcgatcg ctagccgcga tcccggggcc gagcaggcca attccatcgc cgctctgatt
     3241 gcgaggattg agacccatct taaagagaac ccaaaggatg gtcggggctg ggaggtgttg
     3301 gcgccagttt acatgaagct cgagcgctat gacgacgccg tccaggcaag acgcaacgct
     3361 ttgagcctgc ttggcgtaac acccgaacgc gaagtcgatc tcggcgaggc actggcatcc
     3421 gcggctggcg gcgtaatcac ggccgacgcc aaggcggcgt tcgagcgcgc cgttgcgctg
     3481 gcggcggata atgtcaaggc aagattctat ctgggccttg ccgcccagca ggacggaaac
     3541 ggaggcgagg ccgcccgcat ttggcgcgac ctcatcgcaa cagcgcccgc gaacgcgccg
     3601 tggcttgcga tggtgcgcca gtcgcttgct cgtgtcgagc ggccgggtgc aacgtcgccc
     3661 gcgccgcggc ctgacgacat tgccgcggcc agcgaaatga cgcccgaagg gcgcaatgag
     3721 atgattcgcg gcatggtgga gcggcttgcg acccgcctcc atgaggacgg gtcggacgtc
     3781 gaaggatggc tgcggctatt gcgcgcctat atggtcatgg gcgagcgtga taaagcaaag
     3841 gcggcggtgg gtgaggcgcg tggggcactc gcccgcgaac cggaaaagct taagcagctc
     3901 gacgagggca tcagggatct cggcgtcgag ggctaggaga gtgcgatgac gcgcaagcag
     3961 cggcgctttg ccatgattgc cggcggcgtg agcgtgctcg cggttgccgt cttcctggta
     4021 ctgtttgcca tgaaggatgc catcgtcttt ttcaattcac cgaccgacgt cgtagagaag
     4081 cacgttgctc ccggagcgcg catccgcctt ggcggccttg tcgcccccgg cagcgtcacc
     4141 cgcggtgacg cgcttgcggt gcgcttcgag gtgaccgacg gaaatcgcgc catcgcagtc
     4201 acctaccaag gcgttctgcc ggatctgttc cgcgaagggc aaggcgtcgt ggcggaaggc
     4261 gtgctcgatg gcgccggtgt gttcaaagcc gataatgtgc tcgccaagca cgatgaaacc
     4321 tatatgccga aggaagttgc cgacgcctta aaaaagcaag ggcactggaa ggacgagtac
     4381 gataacaaaa aaagcagtgc gatacggcag tgacgtctat gaggtcatgc ccgagcggcg
     4441 ccgcgcgagc ggcaacccgc ggacgtcggg cgatgcacgg atgatgtcgg ttatcaaagg
     4501 ttgcgccaca tgatcgcgga agtaggccat tacgcactcg tcctcgcatt ggcgctggcg
     4561 ttgatccagt cggtgctgcc gttgatcggc gcccgcatcc gcgatagtgc cctgatggca
     4621 gtcgctgagc cggctgcgct cgcgcagttc ggcttcgtgg cactgtcgtt cgttatgctg
     4681 gtggcgtgtt acgtcgcttc cgatttctcg gtccgcaatg tgttcgagaa ttcgcactcc
     4741 gcgatgccgc tcatctacaa gttcaccagc acatggggaa accacgaagg ttcgatgctg
     4801 ctgtgggtgc tgatcctgtc cctgttcggt gctctggtgg cggccttcgc caacaatatt
     4861 ccgcactctc tgaaggcgac ggtgcttgcg gtccaggcct gggtcgcggc gaccttcgag
     4921 cttttcattc tggtaacctc caatccgttc ctgcgttacg cgtcggcgcc gctcgagggg
     4981 cgcgatctta atccagtcct gcaggacctt ggcctcgcca tccatccgcc gctgctctat
     5041 ctcggctatg tgggcttctc gatatcgttc tcctttgcga tcgcagccct catcgagggg
     5101 cgtatcgacg ccgcctgggc acgctgggtg cggccgtggc tgctcaccgc ctggatgtgc
     5161 ctcaccgtcg gcatcgcgat ggggtcctac tgggcttact acgagctcgg ttggggtggc
     5221 tggtggttct gggatcccgt cgaaaacgcc tcgctgatgc cgtggttggt cggcaccgcg
     5281 ctcctccatt ctgccgtcgt gatggaaaaa cgcgaggcgt tgaagatctg gaccatattg
     5341 ctgtcgatcc tcaccttctc gctgtcgctg atcggcactt tcctggtgcg ctccggtgtg
     5401 ctcacttcgg tgcatgcctt cgcgtccgat ccgctgcgcg gcatcttcat cctggcgatc
     5461 cttgtcgtgt tcatcggcgg tggtctcgca ctgttcgcct ggcgcgcccc gctgctgcgc
     5521 cagggcgggt tgttcgcgcc gatttcgcgg gagggcgcgc tcgtcttcaa caacctgctc
     5581 ctcactacgg cttgcgctac cgtgttcgtc ggaacgcttt atcccctcgc gctcgaggct
     5641 gttaccggcg agaaaatttc agtcggagcg ccgttcttca atgcgacctt tgggccgctg
     5701 ttcgcgacgc tgttggtcgt ggtcccgttc gggccgctgc tcggctggaa gcgcggtgac
     5761 ctcgggggcg tcgctcagcg cctctcgggc gctttcttgg ttgctctgat tggtttggcg
     5821 gcgacttttg tggtggaggg taagccgttg ctggcgccgt tcggtgtcgg cttggcgcta
     5881 ttcgtcatca ccggcgccgt cactgacctt agcgagcgga tcgggttttt gcgcaccccg
     5941 cttgcgacgg tgatgcgccg cgccgccggc ctgccccgct cggcctgggg cactgcgttc
     6001 gcgcatctcg gcctcggcat cacgttgctc ggaattgtcg gtgaaaccca atggggtgca
     6061 gagcgcatcg tgtcgctcag gccgggcgac aaggtcacaa tccgcaatta cgacgtcacg
     6121 ttcgaccgca ccgtcaaccg cactgggccg aactacgcgg agctcgccgc tgccttcacg
     6181 gtgcgccggc acggcgaggt catcggcgtc atggaacccg cgaagcgcag ctttgcgtcg
     6241 cgcggaaccg tgacaagcga agccgccctg atggcgcggg gcgtgagcca gctctatctt
     6301 tccctcggcg aggtcaatcc cgacggttcc gccacaatcc gcctctatta caagcctctg
     6361 gtgctgctaa tctggcttgg ctgtgtcgtg atgtttttcg gcggcggatt gtcgctctcc
     6421 gaccggcggc ttcgcgtcgg tgtgccgagg tccgctcggg ccaaggccgc tgccctggcg
     6481 ccggcggaat gagcgtagtg atgcggcggt ggcgattcgc gctcggtggg ctcgcgctgt
     6541 tggcggccca agctgccgtc gcggtccagc ccgatgaaat cctcaaagat ccggcgctgg
     6601 aatcacgcgc ccgcgcgctg tcgcgcgtgc tgcgatgtat ggtgtgccag aaccaatcga
     6661 tcgatgattc cgatgcaccg ctggcccgcg acttgcgcat cttagtgcgc gagcgactca
     6721 cttccggaga tagcgattcc caggtggtcg atttcttggt cgtgcggtat ggcgagttcg
     6781 tgctgctaaa accgcgcata gcgtggcaca atgccgtgct gtggctcacg ccggccgtcg
     6841 cgcttgtggc tggtgccatc gccatgttgg tggccatcag gcggcggcgc gcggctgcgt
     6901 ccggggccgt gccgctcagt tcggatgagg agcggcgact tgccgaagta atcgatccgg
     6961 caccataacg tgcggctgga tgccgcgcgt atctattgat tcatctgcaa aaatttatcc
     7021 tgcgcgcagg cgccgtagcg gtcttaccaa agtttaatgt cgcgttcagc attcggaaag
     7081 gcgatgctcc ccatgttgtc atccgacagc gctgcgaagc gtctaaccga atggaatgca
     7141 cggagccaaa gactatgtca ctgcacgcac cccgggatgt gggtcatcgc ctgttctcca
     7201 agcgtcgcat tgttctgcta gcaacggttg ctggcctggg cgccggcatg ttgtttgctg
     7261 atttcgggac tgttactcga aattcgaccg gcaatacgat attcgcgccg ccctatgccc
     7321 gcgcacaaag cgcacagcgg ccagtaggct tcgccgacat cgttgaaaag gtaaagccct
     7381 cggtgatctc cgtgaaggtc aaggtcaatg ctggcgaggg cttggtgctc aatgaagaca
     7441 atcctctgcg cggcacgccg ttcgaggaat tcttccgtcg cttcggtcag cctgacacca
     7501 cgccgcgctt tggccggccc gatggcgacc ggcagggatc gcggccgcaa cggcgtcaat
     7561 ataccatggg ccagggctca ggtttcttta tctcggctga cggctacgcg gtgactaaca
     7621 atcacgtggt cgacaaggcc gagcaggtgg aggtgaccac cgatgacggc aagagctaca
     7681 ccgccaaggt gatcggcacc gacgcgcgca ccgatgtggc gctgatcaag gtcgaaggcc
     7741 gccatgattt cccgttcgtc cactttgcgg aggacagccc gcgcattggc gattgggtgc
     7801 tcgccgtcgg caatccgttc ggcctcggcg gcacggtgac ggccggcatc gtctcggcgc
     7861 gcggccgcga tatcggcgcc gggccgtacg atgacttcat tcagatcgat gcagcggtga
     7921 acaaaggcaa ttcaggcggt cccacgttca acgtcgacgg taacgtcatc ggcgtcaata
     7981 ccgcgatctt ctcgccttcc gggggtagcg tcggcattgc tttcgacatt ccggccgaaa
     8041 ccgtgaaggt cgtggtggcg cagctcaagg atcatggcgc cgtcacgcgg ggctggatcg
     8101 gggtacagat tcagccggtt acgagtgaga ttgccgatag cctcggtctg aagaatgcgc
     8161 gcggcgcgct ggtggcggaa ccgcaagcca gtagcccggc ccagaaggct ggcatcaagg
     8221 ccggcgacgt cattgtctcg gtcaatggcg aggccgttgt ggacgcccgc aacttggctc
     8281 gccgcatcag cgccatggcg cccgggactt ccgtcaagct tggcatcgtt cggggcggta
     8341 aggaggacac cctgaccctg accctcggtg aattgccgaa ggagcgtcag gcgcgcgccg
     8401 acaccgacga gcgtagctcc tcgaggggtg tcgatgtgcc gaagcttggt ctgtcgcttg
     8461 cgccggctcg caacgggggc gagggcgtcg tggtaaccga ggtcgatccc aatggctcgg
     8521 cgagcgacca tttccagacc ggtgacgtca ttctcgacgt caacggcaag gccgtgtcat
     8581 cgcctgctga tgtgcgcaag gcagtttccg aagctcaaag tgacggcaag cgaagcgtct
     8641 tgatgcgcgt gaagtcgaat cagggaaccc gcttcattgc ggtcccgatc ggcaacgcct
     8701 gaaccaaatg tggggcacgc cactcttatc cccgcccc
//
LOCUS       DATILV010000558         4236 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2945124, whole genome shotgun sequence.
ACCESSION   DATILV010000558 DATILV010000000
VERSION     DATILV010000558.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4236
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2945124"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(40..306)
                     /locus_tag="VLJ17_12965"
     CDS             complement(40..306)
                     /locus_tag="VLJ17_12965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23927.1"
                     /translation="MPFDLSLPLFAASGLALAAVVTYFGWPHIRVRTYNKTHGDLRVI
                     EVALMLSRSARPFLPAAQPNHGKSANRVPGAEFVIYMTLKTGNL"
     gene            540..1022
                     /locus_tag="VLJ17_12970"
     CDS             540..1022
                     /locus_tag="VLJ17_12970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23928.1"
                     /translation="MTVLPDAVRAYEQELLQKADMLAFGLKGLRAMAPERAAELLEDI
                     AARLEVALARDGVGSVVHPGGDERSRTEPRRLAPVVVAARGGGADDIEDFILDILAEN
                     PVGLSVQDIVSNLDEAQLDIKRKTLVVRLHRMVHAGKLSSLAHGHYILSEAERGRRRA
                     "
     gene            complement(1105..1629)
                     /locus_tag="VLJ17_12975"
     CDS             complement(1105..1629)
                     /locus_tag="VLJ17_12975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018316615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3455 domain-containing protein"
                     /protein_id="HSV23929.1"
                     /translation="MMITGRFAFVTILFASAIALGHAAQVTAQVAGQLPDAIAAKGEK
                     VVLTVHAEGAQVYDCKAGDGGKLVWQFREPVATLIQDGKTIGRHYVGPTWEHADGSRV
                     AGKPVGRANGATAQDIPWLKLEAVEAHGAGALAGVTAIQRINTKGGQFEGACDKAGAT
                     FAAPYAADYVFLRK"
     gene            complement(1762..2985)
                     /locus_tag="VLJ17_12980"
     CDS             complement(1762..2985)
                     /locus_tag="VLJ17_12980"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004450 - isocitrate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006102 - isocitrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HSV23930.1"
                     /translation="MAKIKVKNPVVELDGDEMTRIIWQFIKDKLIHPYLDIELLYYDL
                     GIEHRDKTDDQVTIDAAEMIRKVGVGVKCATITPDEARVKEFNLKAMYRSPNGTIRNI
                     LGGTIFREPIICRNVPRLVPGWTKPIIIGRHAYADQYRATDIKFPGKGTITLSFVGAD
                     GKKIEREVFQAPGAGVVMAMYNLDDSIRDFARASFNYGLARGYPVYLSTKNTILKVYD
                     GRFKDIFQEVFDNEFKADFEKKKITYEHRLIDDMVAAALKWSGGYVWACKNYDGDVQS
                     DTVAQGYGSLGLMTSVLTTPDGKVVEAEAAHGTVTRHYRDHQKGRETSTNSIASIFAW
                     TRGLAHRAKLDNNAELAAFAHNLEKVCIDTVEAGYMTKDLALLVGADQKWLSTTGFLD
                     KVDENLKKTMVQRAA"
     gene            complement(3211..4071)
                     /locus_tag="VLJ17_12985"
     CDS             complement(3211..4071)
                     /locus_tag="VLJ17_12985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23931.1"
                     /translation="MSPFTPAPIATASVVAPPDPDDRRVVLGAAIGFDVEQVRIFVES
                     LRANYAGDVLLLIRWPGLRIARYLESRGINVIRVFQTRSFTRSVHARRYAIYLDYLRA
                     GLARYDQVMISDVRDVVFQRNPFDGITSPKCHFYLESAVRTIGEDPTNWRWVRGCFSA
                     AEAERLAPCRISCSGITIGGASAILAYLERMVARIRTMPWRIYRRIGHGYDQAIHNYL
                     VHLDPAIDGIVVDNNRHIATMALEPRAFYRVDRESRIYGPDNHLFPICHQYDRFPDLL
                     KAVEARFANR"
BASE COUNT          812 a         1233 c         1347 g          844 t
ORIGIN      
        1 atcggccccc gcgggacgcg cctattgcgt tttgtgaaac taaagattac cggtcttaag
       61 ggtcatgtaa atgacgaact ccgcccccgg aacccgattg gcggacttgc cgtggttcgg
      121 ctgggcggcc ggcaggaacg ggcgggcgga ccgtgacagc atgagggcga cctcgatgac
      181 ccgcaagtcg ccgtgggtct tgttataggt ccgtacgcgg atgtgcggcc agccgaaata
      241 ggtgacgacg gcggccagcg cgaggccgga ggcggcgaag agcggcagcg acagatcgaa
      301 gggcatgggt actcccccta aacgctcaaa attcgactgt aattttagat tacacgaaaa
      361 attacagctg tcaaatcctt taggtgcacg ttaaccatat ctagcaagtg ttcaccatta
      421 attaaaaatc tccaatacca tcttgccgaa gttgtaattt aagatatcct gtgatgctgt
      481 aattttgctt tacgcggctt tcgggcgctg accgtggcgt aatttcgcgg ggaccggcaa
      541 tgacagtttt gcctgatgcg gtaagggctt acgagcaaga gctgttgcaa aaagcagata
      601 tgttggcgtt cggcctcaag ggcttgagag cgatggcgcc tgagcgcgcc gccgaacttc
      661 tggaagacat cgcggcgcgg ctggaggttg ctttggcgcg agacggggtc ggctccgttg
      721 tccatccagg gggcgacgag cgcagccgca ccgagccccg gcgcttggcg ccggtcgtgg
      781 tggctgcgcg cggcggcggg gccgacgaca tcgaagattt cattctggat attctggcgg
      841 aaaatccggt cggcctgtcg gtgcaagata ttgtcagcaa tctcgacgag gcgcagctcg
      901 acatcaagcg caagacgctg gtggtgcgcc tgcatcgaat ggttcatgcc ggcaagctgt
      961 cgtcgctcgc tcacgggcac tacattttga gcgaggccga acgcggccgc aggcgggcgt
     1021 gaactccccc ttcatcagta tcccatcttg ccgtggaaag gacccttgcg ctccccgaag
     1081 acggggaggg ggcaacccta gccgctactt cctcaagaac acgtagtctg ccgcataagg
     1141 cgccgcgaac gtcgcgccgg ccttgtcgca ggcgccttcg aattggccgc ccttggtgtt
     1201 gatgcgctgg atcgcggtca cgcccgcgag cgcgccggcg ccgtgcgctt ccaccgcttc
     1261 gagcttgagc cacggaatat cctgcgcggt tgcgccattg gcgcggccga cgggcttgcc
     1321 ggcaacgcgg ctgccgtccg catgctccca ggtggggccc acataatgcc gaccgatggt
     1381 cttgccatcc tggatcaagg tcgcgaccgg ctcgcggaat tgccagacaa gcttgccgcc
     1441 gtcgccggcc ttgcaatcat agacttgcgc gccttcggca tgcacggtca gcaccacctt
     1501 ttcccccttg gccgcgatgg cgtcagggag ctgacccgcc acttgcgcgg taacttgtgc
     1561 tgcgtgcccc aatgcgatcg cgctggcgaa caggatagtg acgaacgcga agcggccggt
     1621 gatcatcatg cgactccttc aaccccatgt acgcaacatg ctcaaacgta gggtcaatga
     1681 gcccgggccc cacaacggct ccgcgtcatc caccctcgcg cgatgagaaa cggcgggttc
     1741 aacagaaccc gccggacacg actacgccgc gcgttgcacc atcgtcttct tcaggttctc
     1801 gtctactttg tcgaggaacc cagtggtgga gagccacttc tggtcggcgc cgaccagcaa
     1861 cgccaggtcc ttcgtcatgt agcctgcctc aacggtgtcg atgcagacct tctcgaggtt
     1921 gtgggcgaac gccgccaatt ccgcgttgtt gtcgagcttg gctcggtggg cgagaccgcg
     1981 cgtccaggcg aaaatcgagg cgatcgaatt ggtcgaggtc tcgcggccct tctggtggtc
     2041 gcggtaatgc cgcgtcaccg tgccatgggc ggcctcggcc tccaccacct tgccgtccgg
     2101 cgtcgtcagc accgaggtca tcaggccgag cgatccgtaa ccctgcgcca cggtgtcgga
     2161 ctgcacgtca ccatcataat tcttgcacgc ccacacatag ccgcctgacc atttgagcgc
     2221 cgccgccacc atgtcgtcga tcaggcggtg ctcgtaggtg atctttttct tctcgaagtc
     2281 cgccttgaac tcgttgtcga acacctcctg gaagatgtcc ttgaagcggc catcatagac
     2341 cttgaggatg gtgttcttgg tcgacagata caccgggtag ccgcgggcaa ggccgtaatt
     2401 gaacgacgcg cgggcaaaat cgcggatcga atcgtcgaga ttgtacatcg ccatgacgac
     2461 gccggcgccg ggcgcctgga acacctcgcg ctcgatcttc ttgccgtcgg cgccgacgaa
     2521 gctgagcgtg atggtgccct tgccggggaa cttgatgtcg gtagcgcggt attggtccgc
     2581 gtaggcatgg cggccgatga tgatcggctt ggtccagccc ggcaccaggc gcggcacgtt
     2641 gcggcagatg atcggctcgc ggaaaatggt gccgccgaga atgttgcgga tggtgccatt
     2701 gggcgaacga tacatcgctt tgagattgaa ttccttcacc cgggcttcgt ccggcgtgat
     2761 ggtggcgcat ttcacgccga cgccgacctt cctgatcatc tcggccgcgt cgatcgtgac
     2821 ttgatcgtcg gtcttgtcgc gatgctcgat accgagatcg taatagagca attcaatgtc
     2881 gagataggga tggatcagtt tgtctttgat gaactgccag atgatccggg tcatctcatc
     2941 gccgtcgagc tcgacgaccg ggttcttgac tttgatctta gccatttatt gagcgacctt
     3001 tgttcgggcg cgcgggtatc atgtggggtc ggcgtgcgcc cgcaaatggc gccgccccca
     3061 ttcggttgtg cctatagcac cgcgggaatc agaagtcagt aatcagggct gtagattctg
     3121 tgggaggcga cggggagggt ttgattggga caaaatcgct cgtgaggttt gcacaaacct
     3181 tgatcaccgc gccaggcgat tctgcacacc ttaccggttc gcaaagcgag cctcgaccgc
     3241 cttgaggaga tcggggaagc gatcatactg gtggcagatc gggaacaggt gattgtcggg
     3301 accgtaaatg cgcgattcgc ggtcgactcg gtagaacgca cgcggctcca aggccatggt
     3361 ggcgatgtgc cggttgttat cgaccacaat tccgtcgatc gcgggatcca gatggacgag
     3421 gtaattgtgg atagcttggt cgtagccgtg gccgatccgg cgatagatgc gccacggcat
     3481 ggtgcgtatc cgcgcaacca tccgttccag gtaggccagg atggcggagg cccccccgat
     3541 ggtgatgccg ctgcagctga ttcgacaagg ggcaagtcgc tccgcctccg cggccgaaaa
     3601 gcagccgcgc acccagcgcc aattggtcgg atcctctccg atggtgcgta cagcgctttc
     3661 cagataaaaa tggcattttg ggctggtgat gccgtcgaag ggattacgct ggaacacgac
     3721 atcgcgcacg tcggagatca tgacctgatc gtaacgggcc agccccgcgc gcagatagtc
     3781 aaggtagatg gcgtagcgcc gcgcgtgaac cgagcgggtg aacgaacggg tttggaacac
     3841 ccggattacg ttgatgccgc ggctttcgag atagcgcgcg atccgcagac caggccagcg
     3901 gatcagcaac agcacgtcac ccgcataatt ggcgcggagc gattcgacga agatgcgcac
     3961 ctgctcgacg tcaaatccga tggcggcgcc gagcaccacg cggcggtcgt cgggatcggg
     4021 cggtgcaacg actgacgcgg tcgcaatcgg cgcgggtgtg aatggcgaca ctgcagcttt
     4081 tctctcgatg gatggccgag cttgcgccgg cggtgacggc agtggaaaac gtcgccaaac
     4141 taacgcggtg gcgccaggtt ggcacgggga tttattggat gctccgggcg aagcaccacg
     4201 ccgtataaag gttttgttcg agtgagacca acgagc
//
LOCUS       DATILV010000559         8307 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1668213, whole genome shotgun sequence.
ACCESSION   DATILV010000559 DATILV010000000
VERSION     DATILV010000559.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8307)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8307)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8307
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1668213"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            208..735
                     /locus_tag="VLJ17_12990"
     CDS             208..735
                     /locus_tag="VLJ17_12990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23932.1"
                     /translation="MVWQFQLMRSNPQFGWVIKAVAVAGLLLVGVGGSDARSEPGPFS
                     ALHGSWAGAGTIKKSNGSSERIRCRSAFETAGGGNLSLRLRCASDSYNFDLTANLAYE
                     GGAISGSWQEATRNVNGGISGRSASEGRQVQAVAQAVGITSNITLTTRGNHQSVQILT
                     PGAEVPEISVSLEKK"
     gene            complement(924..3233)
                     /locus_tag="VLJ17_12995"
     CDS             complement(924..3233)
                     /locus_tag="VLJ17_12995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HSV23933.1"
                     /translation="MPAPEQRRTFRLALGIERFGLIALRFPIASVVVFVVLAALAAVG
                     VMRIQADDSLSQLFRSETPEFKQYEEVTRRFPSSEYDVLVVIEGKNLLQRESLEKLRD
                     LVTDLQLIEGTRGIISLFSARQPPEGDHLPEPLFPEPLPEGKAYDALVQKVLSNEIIR
                     GKLISEDGELALVVLALDPAAATGNGLSAIVGEIRKTAAEDIAGTGLKSELSGVPVMQ
                     LDIRNAMERDRVVYNALGFVAGCLIAIAFFRRVSFMVIAAGPPLTAILLALGMLGWLD
                     FRLNIFLNVMTPLIMVISFSDSMQLTFLARDRLIAGRNKYEAFRDAILIAGPACVLTH
                     ATAGLSFFSLLFANSELIRSFGEAGIIATVVALVAVLTLVPLLGVLLVHKETSFSAKI
                     KGADSAVDMLRRFCGWIAHRMVSRPGLYTLIAITLITALGLLYANLQPRYRLADLVPD
                     KEQAVQASGRLDAKLTGANPLDILLEFPPGASLYDQMTLAAMAEVHTILEKQAGVGNV
                     WSIETLRRWLAEKAGKSDVATLKQYIEILPPYLVRRFLSADQAAVVVSGRIPDKDASQ
                     LLPVVENLDRSLAAVRAKYPGYRISVTGLSAIAARNSADMIKKLNFGLTVEIVFVAAF
                     IGLAFRSWIVALAVIPPGIFPVLVSGDILWALGDGLQFASIVALTVSFGLALSATIHF
                     LNRLRLEERPGEDPGGAVERATILVGPALILTSVVLACGLIATVLSDLPSLRLFGWLS
                     AFAMISALIADLLILRPTIMFLRRLARRL"
     gene            complement(3460..4377)
                     /locus_tag="VLJ17_13000"
     CDS             complement(3460..4377)
                     /locus_tag="VLJ17_13000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSV23934.1"
                     /translation="MNEMTQRLTGTEHWTDNGEAKLFLWNKSAGDPARAKATILFVHG
                     SSMASQPTFDLDVPGRPNSSAMEFFAWRGYDTWSVDMEGYGRSTKTRNNNAPIALGAE
                     DCFAAATYIQGLRGAKPLLVYGISSGALRAALFAQNHPEMVSRLALDAMVWTGRGSPT
                     LADRSKRLAQFRATNRRPIDRAFVHSIFNRDHPGSADEKVVDAFADAILALDDSVPTG
                     TYVDMCANLPVVDPTKIESATIIMRGQWDGIASFDDVIEFFKLLPNPDKQFAVMPGIS
                     HASFQGKNYELCLHILLSFFSQPEPVYRG"
     gene            4618..5388
                     /locus_tag="VLJ17_13005"
     CDS             4618..5388
                     /locus_tag="VLJ17_13005"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HSV23935.1"
                     /translation="MSEREDLVLAYRILAAHGVVDAYGHVSLRTVKNPKRYLLARAMA
                     PELVTADDILEFDLDSNPVKDLRVALYLERYIHGEIFKSRPDINAVVHNHSPSVIPFG
                     VTTAPLRPLFNTGAFIGEGVPTFEIRDFDESGDLIIKTPYLGHSLATTLGAKPAALMR
                     GHGAVVVGESLMLAVVRSVYLELSARLQMQAMLIAGPAGNIVYLDEREVAATSGRQAS
                     AGTWQRTWDLWCIKARTQIEMEQRAKRRKSSLPAGGEQ"
     gene            5557..6576
                     /locus_tag="VLJ17_13010"
     CDS             5557..6576
                     /locus_tag="VLJ17_13010"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSV23936.1"
                     /translation="MSSPSTPQSQSDLARSGTLEELYGKLNKVGMGPGWNKPTPSLWP
                     APRKTLVPAHWKYQLARGALDAAGRLINTALAERRNLILFNPAQGNTYGTVRTLVAAY
                     QMIMPGEWARVHRHTPNALRLVLDTEPGAYTEVDGVHIAMAPGDVLLTPNWSTHGHGN
                     RSTACAYWLDFLDAPLVQLLEPMFFEVTEEERDRGPADKSDQMTLSATTDQPFVFTLK
                     DTLRRLGEAKSEPGGPFGTQIELGHPALATMALYMMRLGAGSRTVPYRTTANNIYAVV
                     QGEGASTVDGEQFEWRRGDVIAAPAWRAHCHQAIDDAILFRVTDEPVMQRFGWWREEW
                     PDESR"
     gene            6756..7685
                     /locus_tag="VLJ17_13015"
     CDS             6756..7685
                     /locus_tag="VLJ17_13015"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSV23937.1"
                     /translation="MLIALPPVVAQDWPSHLVRIIVPAAAGGSSDAAARLVTNHFQAV
                     FRQPFIIENKPGNGNAMGAAFVAQAEPDGYTLLVSNSASNLTVPLVARLAGYDPVADF
                     SHIVMLTSSPYVFAVYPGLGVKSLAEFVARARTQKLAYTAANRGGLGNIGGEYFQRLA
                     GISMQHVPYRGGGPAVADVIAGHVPALFLPVTTVGEHVRSGALVALATTSQTRLQVFP
                     DVPTFAESGYPPLILASWFGLSGPKKLPPDIAARINHEARAFLKEPQMRKLADNDASA
                     PLDADAAGFTRYVAAEVARWGDVVRSLDIKGEE"
     gene            7821..>8307
                     /locus_tag="VLJ17_13020"
     CDS             7821..>8307
                     /locus_tag="VLJ17_13020"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSV23938.1"
                     /translation="MARIVHIALKVEDLEQATKFYEDVFGIYQTKTGHARGHTSRHMT
                     DGNIDLALMVYDSEQEPEAQLSGPGPCIHHIGIEVEDRAAAVKKITENGGVIFSDREE
                     GALKFRSPDGTMAEIVGIGRYKKKQKSDKSRIVHVAIKVQDLDKATKFYENVFGFRQV
                     KT"
BASE COUNT         1647 a         2535 c         2645 g         1480 t
ORIGIN      
        1 tgccacctgt catgaacctg ccagtgatgg ggggcgacag atgtggcgtt gcagggccgc
       61 ccgggaccac cggtttgtcc gacagttgcc gtggaatgtt gcatttctcg acacgataat
      121 cgatgcagtc ggcgtctgct gttatcaacg tcaacaatca ggatgcggcc gacggaccgg
      181 ccacgtccgc tgaacacggg gccttttatg gtgtggcaat ttcaattgat gcgttcgaac
      241 cctcaattcg gttgggtaat caaagcggtc gcagtggccg gattgctgct ggtaggtgtt
      301 ggcggaagtg atgcgcgcag tgagccgggc ccgttttcgg cgttgcacgg atcgtgggca
      361 ggcgccggga ccatcaagaa gtccaacggc tccagcgagc gcatccgctg ccgttccgct
      421 tttgagacgg ctggcggcgg caatctttcg ctgcggctgc gatgcgccag tgacagctac
      481 aatttcgatc tgaccgcaaa cctcgcctat gagggcgggg cgatctctgg atcgtggcag
      541 gaggcgacac gaaacgtgaa tggaggtatt tcgggccgtt cggcgagcga aggccgtcag
      601 gtccaggcgg ttgcccaagc cgtcgggatt acttccaaca tcaccctgac cacccggggc
      661 aaccatcagt cggtgcagat cctgacgccg ggggccgaag tgcccgagat cagcgtcagt
      721 ctcgagaaga aataaatttc acgcgctccg cgctgattac cggttcggtg tcgaacacgt
      781 cttagccggc aggggtgggc aaaggcgctt ggcacagcgg acggcctcct gcgcccggcc
      841 ccgtcatggc ttcgccggta ggcacggcgc gagaaagtca tcgaaaacac aaaaaaaggc
      901 cgtgccacgc gcccttgtcc gccctacagg cggcgcgcaa gccgacgtag gaacatgatc
      961 gttggccgca ggatcaacag gtcggcgatc agtgccgaga tcatcgcgaa ggcgctcagc
     1021 cagccgaaca ggcgcaacga cggcaagtcg gacaacaccg tcgcgatgag tccgcaagcg
     1081 agcaccactg aggttaggat caaggcaggg ccgaccagga tggtggcccg ctcgactgcc
     1141 ccgcccggat cctctccggg cctttcttcc agtctaagcc gattgaggaa gtggatggtc
     1201 gcgcttaggg caaggccgaa cgaaaccgtc agggcgacga tactggcgaa ttgcagacca
     1261 tcgcccagcg cccacagaat gtcgcccgat accaggaccg gaaagatccc cggcggaatt
     1321 acggccagcg ccacgatcca ggatcgaaag gcaagaccga tgaaagcggc gacgaacacg
     1381 atttcgaccg tgaggccgaa attcagtttc ttgatcatgt cggcgctgtt gcgcgccgcg
     1441 atcgctgaca ggcccgtcac cgaaatgcga tagccggggt atttggcccg taccgctgcg
     1501 agcgacctgt cgaggttttc gacgaccggc agcaactggc tcgcgtcctt gtcaggaatg
     1561 cggccggaga cgaccaccgc ggcctgatcg gcggacagga accggcgcac caggtaaggg
     1621 ggcagaattt cgatgtattg cttgagggtc gcgacatcgg atttgcccgc cttttcggcc
     1681 agccagcggc ggagcgtctc gatggaccac acattgccga caccggcctg cttctccagg
     1741 atggtgtgga cctccgccat agcggcgagc gtcatctgat cgtagagcga ggcgccgggc
     1801 gggaattcga gcaggatgtc gagcgggttg gcgccggtga gcttggcgtc gaggcggccg
     1861 ctggcctgta ctgcctgctc cttgtcaggc acgaggtcgg cgaggcggta gcggggctga
     1921 aggttggcat acagcaggcc gagcgctgtg atcagcgtaa tcgcaatgag cgtgtagagc
     1981 ccggggcggc tcaccatgcg atgggcaatc cagccacaga accggcgcag catgtcgacg
     2041 gcggagtccg cgcctttgat cttggcggag aagctcgtct ccttgtgtac cagcagcacg
     2101 ccaagcagcg ggaccaacgt gagcaccgcc accagtgcca cgacggtggc gatgatcccg
     2161 gcttcgccga agctgcggat caattccgaa ttggcaaaca gcagcgagaa aaacgacagg
     2221 cctgcggtag cgtgggtgag cacacaagcc ggccccgcga tcaggatagc atcgcgaaag
     2281 gcctcgtatt tgttgcggcc cgcgatcagg cggtcgcggg ccaggaaggt gagctgcatg
     2341 ctgtcggaaa aactgatcac cataatcagc ggggtcatca cgttgagaaa aatattcagg
     2401 cgaaagtcga gccagccgag catgccgagc gccagcagga tggcggtcag cgggggaccc
     2461 gccgcgatca ccatgaacga aaccctgcgg aagaacgcga tggcgatcag gcaccccgcc
     2521 acgaatccga gggcattgta gaccacgcgg tcgcgctcca tggcattgcg gatatcgagc
     2581 tgcatcaccg gtacaccgga caactcgctc ttaaggccgg tgccggcgat atcttccgcc
     2641 gcggtcttgc gaatttcacc gacgatggca gacaggccgt tgccggtcgc cgccgccggg
     2701 tcgagcgcaa gcaccactaa ggcaagttcg ccgtcttcgg aaatcagctt gccgcgtatg
     2761 atctcattgg acagtacttt ttggacgagc gcgtcatagg ccttgccctc gggcaacggc
     2821 tcggggaaca gcggctccgg caagtggtcg ccttcgggtg gctggcgcgc ggaaaacagc
     2881 gagatgatgc ccctggtgcc ttcaatgagc tgcaagtcgg tgacaaggtc acgcaacttc
     2941 tcgagcgatt cccgctgtag taggttcttg ccctcgatta ccaccagaac gtcgtattcg
     3001 ctcgacggaa agcgtctggt cacctcctca tattgcttga attctggcgt ttcggagcga
     3061 aacaattgac tgagcgaatc gtcggcctgg atgcgcatca ccccgacggc cgcgagcgcc
     3121 gctaggacga cgaacacgac gacgctcgca atgggaaacc gcagcgcaat gaggccgaat
     3181 cgctcaatgc cgagcgccag ccgaaatgta cgcctctgct ctggcgccgg cataccggac
     3241 gcatttgccc tggcttgatc gggctgctcg tggcgcacct atgcctccac aatcaacaga
     3301 ttaatgtttc gtttcccgcg ttcgttccca aaactgtcat gcccgcgaaa gcggccaatc
     3361 cagcaatcaa atgacttcgg cctgcggcac ggccccattc caacggcccc acggcggtta
     3421 gttgatgcac cgccggcgtg gggccttttt gtcgcccgcc taaccacgat agaccggctc
     3481 cggctgggag aagaagctca gcaggatatg caggcagagc tcatagttct tgccctggaa
     3541 gctcgcgtgg gaaatgcccg gcatgaccgc gaattgctta tcgggattgg gcagcagctt
     3601 gaagaactcg atgacatcgt cgaagcttgc gatgccgtcc cactggccgc gcatgatgat
     3661 tgtggcggat tcgatcttgg tcgggtcgac caccggaagg ttcgcacaca tgtcgacata
     3721 agtaccggta ggaaccgagt cgtcgagcgc caggatggca tccgcgaaag catccacgac
     3781 tttttcgtcg gctgaacctg gatggtcgcg gttgaagatc gaatgcacga aggcgcggtc
     3841 gatgggccga cggttggtgg cgcggaattg cgccaaccgc ttggaccgat cggccaaggt
     3901 cgggctgccc cttccggtcc aaaccatggc atcgagggcg agccgcgaca ccatttcggg
     3961 gtgattttga gcgaacagcg ccgcgcgcag tgcgccggat gaaattccgt agacgagcag
     4021 cggcttggcg ccgcgcagcc cttggatata ggtggcggcc gcgaaacaat cctcagcccc
     4081 caacgcgatc ggggcattgt tgttgcgggt cttggtggaa cggccataac cctccatgtc
     4141 caccgaccag gtgtcatagc cgcgccaggc gaaaaattcc atggcggagg aattggggcg
     4201 ccccggcacg tcaagatcga acgtcggctg cgacgccatg gatgacccat ggacgaacag
     4261 aatcgtggct ttggccctcg caggatcgcc ggcagactta ttccataaga acaactttgc
     4321 ctcgccgttg tcggtccagt gctcggtgcc ggtcaggcgc tgggtcattt cgttcatgaa
     4381 cgggcctttc taggcatgac tgctatgtcg aaaagtgggc agaaagccga tgaatcaaga
     4441 tgggttcaac ggcgccttat acaagcgcgg cggcgacgga gatacacggt ttttagggct
     4501 cccagcagcc cgaatgcggg ccgcaatatg ggagccacgt gcgcgattgc gtcccgggtt
     4561 gcgcccttag gcgaaatcgg caggatagcg cgtggcggca ccgggattgg aaataccatg
     4621 agcgagcggg aagaccttgt gctggcctac cggattctcg ctgcccacgg ggtcgtggat
     4681 gcctatgggc atgtgagcct gcgcaccgtg aagaacccca agcgctatct gctcgcacgc
     4741 gcgatggcgc ccgaactcgt gactgccgac gatattctgg aattcgatct cgacagcaat
     4801 ccggtgaaag acctgcgggt cgcgctttat ctcgaacgct acattcatgg tgaaatcttc
     4861 aagagccggc cggacatcaa cgccgtggtg cacaaccatt cgccatcggt gatcccgttc
     4921 ggcgtcacca cagcgccgct gcggccgctg ttcaacaccg gtgcgttcat cggcgaaggc
     4981 gtgccgactt tcgagatccg ggatttcgac gagagcggcg atctcatcat caagacgccg
     5041 tatctgggcc attcgctggc gacgacgctc ggagccaagc ccgccgcgct gatgcgcggg
     5101 catggcgccg tagtggtcgg cgaaagcctg atgctggcgg tggtacgcag cgtctatctc
     5161 gaactctccg ccaggctgca gatgcaggcg atgctgatcg ccggacctgc cggcaacatc
     5221 gtgtatctcg acgagcgcga ggtcgccgcg acgagcggcc gtcaggcctc tgccggtaca
     5281 tggcaacgca cctgggacct gtggtgtatc aaggcgcgga cgcagatcga gatggaacag
     5341 agggcgaaac ggcggaaatc atccctgccc gcagggggag agcaatgatg ctgccgttgc
     5401 ggccgaaggc ggtccggggt ggcgtgatgg cggtccggtg acatcggtgc aagattcacc
     5461 gcgcggagta tactgggctg ccctcacccc cgccccgctc gcttcacgag cgacccaccc
     5521 cggcaggggg tgaaatcgat cgaagaggtg cgcccgatgt cttcgccatc gaccccacaa
     5581 tcgcaatccg atctcgcccg ttcgggcacc cttgaggaac tctacggcaa gctcaataag
     5641 gtcgggatgg ggccgggctg gaacaagccg acgccgtcgc tatggccggc cccgcgcaag
     5701 accctggtgc cggcccattg gaaataccag cttgcacgcg gtgcactcga tgccgccggc
     5761 cggctgatca acaccgcgtt agcggagcgg cgtaacctta tcctgttcaa cccagcgcag
     5821 ggcaacacct acggtactgt gcgtacgctg gtcgccgcct atcagatgat catgccgggt
     5881 gagtgggcgc gtgtgcaccg ccatacgccg aacgcgctac gcctcgtcct agataccgag
     5941 cccggcgctt acaccgaggt cgacggcgtt catatcgcca tggcgcctgg cgatgtgctg
     6001 ctgacaccga actggtcgac ccacggccac ggcaatcgca gcacggcctg cgcatactgg
     6061 ctcgattttc tcgacgcgcc gctggtgcaa ctgctggagc cgatgttttt cgaggtcacc
     6121 gaggaggaga gggaccgggg tccggcggac aaatccgacc agatgacgct ttctgcgacc
     6181 acggaccagc ccttcgtatt caccctcaag gacaccttac gccggctcgg cgaagcaaag
     6241 tctgagcccg gcgggccgtt cggcacccag atcgagctcg gccacccggc gctcgccacc
     6301 atggcgcttt acatgatgcg gcttggtgca ggcagccgca ctgtgcccta tcgcaccacg
     6361 gcgaacaata tctatgcggt tgtacaaggc gagggggcct ccacggtcga cggcgagcaa
     6421 ttcgaatggc ggcgcggcga cgtcatcgcg gcgcctgcgt ggcgggcgca ttgccatcag
     6481 gctatcgacg acgccattct gttccgcgtc accgacgaac ccgtgatgca acgctttggc
     6541 tggtggcgtg aggaatggcc ggacgaatcg cgatgacaaa tgcccgaatt tcttatcctt
     6601 cccggtcttg cgggagggtg gcgcgaagcg ccggacgcag ggatcgcaga cgcagcggtg
     6661 ccgaggacag aaccccaccc cgcctctgcc taaagatggg gagagagaaa agagctgcgc
     6721 agcgcctagt tgcgatcatt gcctccactg cagccgtgct cattgctttg ccccctgtgg
     6781 tcgcgcagga ctggcccagc catctcgtcc gcattatcgt tccggcggcc gcgggcggct
     6841 cttcagatgc ggcggcgcgg ctcgtgacca atcacttcca ggcggtgttc cggcagccgt
     6901 tcatcattga gaacaagccc ggcaacggca atgcgatggg cgcggccttt gtggcgcagg
     6961 cggaacccga cggctacacg ctgctggtgt ccaattcggc gtcgaacctc acggtgccgc
     7021 ttgtcgcccg ccttgccggc tacgatccgg tcgcggattt cagccacatc gtcatgttga
     7081 ccagttcgcc ttatgtgttc gcggtctatc cgggtctggg tgtgaagtca ctcgccgaat
     7141 tcgtcgcccg ggcgcgcacc caaaagctcg cctacacggc cgccaatcgc ggcgggctcg
     7201 gcaacatcgg cggcgaatat ttccagcgtc tggccggcat ctcgatgcaa catgtgccgt
     7261 accggggcgg cggtccggct gtggccgacg ttatcgcggg ccacgtgccg gcattattct
     7321 tgccggtgac cacggtgggg gaacacgtgc gcagcggcgc cctcgtcgcg ctcgcgacaa
     7381 cgtcgcagac tcgtctgcag gtttttccgg atgtgccgac cttcgcggaa agcgggtatc
     7441 cgccactgat cctggcctcg tggttcggcc tgtccggccc gaaaaaactg ccgcccgaca
     7501 tcgcagcccg aatcaaccac gaggcccgtg catttctcaa ggagccgcag atgcgcaagc
     7561 tcgccgacaa cgacgcctcg gcaccgctcg atgcggacgc ggcgggattt acccgctatg
     7621 tggcagccga ggtcgcccgt tggggcgacg tggtgcgctc gctcgacatt aagggggagg
     7681 agtgaaggcc gcctcagtgt ttttcaaatc ctatgcaact tcgtcccggg cttgccacct
     7741 gacgtcgcgc gccggcgccc atgccggtcg ctatgcttga caccccggca cacttcaacg
     7801 aagagatcga ggagatcgcc atggctcgca ttgtccacat tgcgctcaag gtcgaggatt
     7861 tggaacaggc gacgaaattt tacgaggacg tgttcggcat ctaccagacc aaaaccgggc
     7921 atgcccgcgg ccacacctcg cggcatatga ccgacggcaa tatcgatctc gccctcatgg
     7981 tctacgacag cgagcaggag cccgaggcgc aactctccgg gccgggacct tgcattcatc
     8041 acatcggaat cgaagtggag gaccgcgcgg cggcagtaaa gaaaattacc gagaatggcg
     8101 gcgtcatctt ctccgatcgg gaggagggcg cgctcaagtt ccgttctccg gacggtacca
     8161 tggcggagat cgtcggcatc ggtcgctaca agaaaaagca aaagagcgac aagtcacgca
     8221 ttgtgcacgt cgccattaag gtgcaggacc tcgacaaggc gaccaagttc tacgagaacg
     8281 tgttcggatt ccgccaggtc aagaccg
//
LOCUS       DATILV010000560        13262 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_903704, whole genome shotgun sequence.
ACCESSION   DATILV010000560 DATILV010000000
VERSION     DATILV010000560.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 13262)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13262)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13262
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_903704"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(60..1301)
                     /gene="thiO"
                     /locus_tag="VLJ17_13025"
     CDS             complement(60..1301)
                     /gene="thiO"
                     /locus_tag="VLJ17_13025"
                     /EC_number="1.4.3.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012752103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016647 - oxidoreductase activity, acting
                     on the CH-NH group of donors, oxygen as acceptor [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine oxidase ThiO"
                     /protein_id="HSV23939.1"
                     /translation="MQAGLSLRGSIGKRRALLSSRAVVVEIPTAVDVAVVGAGVIGLS
                     IAWRLALRGLSVAVFEQATAGAGASLAATGMLAAAAEHEPGCHDLLALALESQRQWPQ
                     FRAALEAQSGHDIDFREDGTLVVALGRDEVERLRFRYDLHKRCGLSTRWLSGSEIRAM
                     EPALRPSVAAGLYCATDHQVDPRLVIAALRAAYVAAGGRLIEHCAVSGVDLAGGRVVG
                     LVVATGRCRASTVVLTAGAWTSDVLPPGLTVPVRPLKGQALAVRTTPDTGTLAHIVWT
                     EQIHLAPKGDGRLIVGATVEERGFDDAITAGGLYVLLEGARRAFPAIEEMAIDAVSTG
                     LRPSSIDDAPILGATSIPGLALATGHHRNGYLLAPATAFAMEALVADGALPAMARPFG
                     LDRFGSADGHRELEHARGMPT"
     regulatory      complement(1348..1466)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            1652..2605
                     /locus_tag="VLJ17_13030"
     CDS             1652..2605
                     /locus_tag="VLJ17_13030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010686093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HSV23940.1"
                     /translation="MPRALAAWEPSTRYPDPAVQILDPSFARYRIVQASVERLYTGTR
                     WSEGPVWFGDARCLLWSDIPNNRIMRWDEITGRTSVYRQPSNNANGLARDRQGRLITC
                     EHKARSVTRTEYDGTVTVLIDKFDGKPLNSPNDVVVKADGSIWFSDPSAPGFDPYEGR
                     VERPELPTNVYRLDPQTGRATVAAGDLRPNGLCFSPDERKLYLADNSVTPRVIRVYDV
                     VDDGAKIANPRVAVTCDAGTIADGFRCDVDGNLWVGAGPGEDLDGVKVYNPDGKPIGR
                     IALPERCANLTFGGVYRNRLFMAASHSLYSLYVNTQGVAGR"
     gene            3461..4630
                     /locus_tag="VLJ17_13035"
     CDS             3461..4630
                     /locus_tag="VLJ17_13035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007758124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV23941.1"
                     /translation="MRRTPAFFCWFVFLCALVPAHAQQTVKIGLIMTYSGQFTDPAAQ
                     MDNGIKLYMQQHGDVVAGKKIEIVRRDTGGAPDSAKRLAQELIVRDNVDILAGFVITP
                     EALAVADLSAEAKKFMVVMNAATSIITTKSPYMTRVSLTLPQNCEQLGTWAFKSGIRK
                     VYTMVSDYAPGHDAEASFQGAFKAAGGEIVGAARMPVATVDFSAFVQRVKDQDPEAIF
                     VFIPGGSQPPALAKALVERGIDAKRIKVMGQGEIAEESALAGMGDAAIGIITAFHYDY
                     NHPSETNGNFVKAYNAEFKRNPDFFSAGGYDGMHLIYEALKKSGGKADGEDLIAAAKG
                     MKWESPRGPMSIDPETRDVIQTIYIRRVEKVNGQLRNVEIEKFENVKDPVKARMK"
     gene            4874..6436
                     /locus_tag="VLJ17_13040"
     CDS             4874..6436
                     /locus_tag="VLJ17_13040"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSV23942.1"
                     /translation="MKYALMISAALLMALALGEGQQPASAQSNPLDLVKQGVEAQGGA
                     DALRAIKTLTLKADAKHWEPGQSNSVNGESRFLGDSTVTTTIDYTNQVRVRYDWDRDM
                     KYPAVEKVKYSEVRYPTYGAVFDDKGEAKPMSGVRLAANIREGGRGSAKLLLNALDAP
                     QGLSAIEDQKLGDQTLPAVAFAQGSVKYIIIFDRSTKLPAAVRTRDEDNIWGDSNYDV
                     VLSDWKAVGGVKMAHTRSYRLGNMEVQRLTYKEISVNTPIAPTTFDIPDAVKTAAKPP
                     ATGNVPYQWVIRRIFLARFTDSDAIYFPPGGSFKLVELAPNVQMVQGGGANNLIVNMK
                     DGLAVFDAPTDEGQSKWVIDAAKAKYPGKPIKYLVLTHHHMDHTGGMRAYAAEGATVI
                     VPAPDKAYFEQVVKAPHALEPDAQQKAMKPVTVQEVKDTFSIKDDTAEINLYNIPNPH
                     VDGYLLAHVAKDNILWITDLISPRGPIARNPATVAVGEALRKHNITGATIAGGHGTTA
                     KQADIAPALAMN"
     gene            6533..7513
                     /locus_tag="VLJ17_13045"
     CDS             6533..7513
                     /locus_tag="VLJ17_13045"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV23943.1"
                     /translation="MMRRRDFIAGLGSVVAILRAARAEEPTRRVGILLFSAEDDPVTQ
                     TRLAGLRDGLEAAGWAEGRNLQIDYRFGAADPARLLSYADELAKIAPDVIVTGGAPAT
                     NAVQKLTQTIPIVFVEATNEIGYGVMRNLTSLDGNATGITNLYLAIGTRWLELLREAA
                     PRVTRVALLFNPEFDSRSYIAAIEASATAYDVKAVRTPVRNAEEIERAIGTFAAEPNG
                     GLLIVPPSPAFANIQLIFRLAKRYRMPAIYPTRGFAAEGGLMAYGPNSAELFRSAATF
                     VDRILRGARPSELPVQFLTRFELVVNLKVARAIGLEIPSGLIARAAEVIE"
     gene            7533..8591
                     /locus_tag="VLJ17_13050"
     CDS             7533..8591
                     /locus_tag="VLJ17_13050"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HSV23944.1"
                     /translation="MMDRVFGAIALSLMMTVHATAADDTTAPVVSTETMPSLAPILKK
                     ITPAVVKIEVKGRVTVTTNGRKRDIREIHEVGSGVVYDPNQGLIITNHHVIDHAYEIT
                     VTLTDGRSLNAKRLGADPDFDVAMIKVQADNLPSIPFGDSSQLEVGDIVLAIGYPMNM
                     AQSVTSGIVGGLHRTNIGIEQHENFIQTDAAVYPGNSGGALVNIKGDLVGINTAFIGS
                     TNSNPGVGFAIPINMSRIIANQILKFGDIRRGSLGITIEDPTPAMIHDIKPTRPQSVA
                     VITRVNPGSAGERAGLKSGDLVTKFGDVAVRSASFLRTRIALLRIGETAELAILREGK
                     PMTVRAIMAERQPRLSAK"
     gene            8721..9776
                     /locus_tag="VLJ17_13055"
     CDS             8721..9776
                     /locus_tag="VLJ17_13055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015664952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HSV23945.1"
                     /translation="MTYLAKPKFHHPDLPTNRLGYTHRDYEGKISTLCAGCGHDSITA
                     SIIEACFELSIAPHRVAKISGIGCSSKTPDYFLGNSHGFNSVHGRMPSVLTGANLANR
                     DLIYLGVSGDGDSASIGVGQFVHAIRRGVNMVYVVENNGVYGLTKGQFSATADRGSKS
                     KKGIINADSPIDMVAMALQLGASFVARSFSGDKSQLVPLIKAAIEHRGAAFIDVISPC
                     VAFNNHAGSTKSYDYVREHNEAVNRLDFITGRDAIHVDYAPGAVQTVEQHDGTTLVLR
                     KIDADYDVHDRLAAMSFLQQHTAEGQVVTGVLYLDREPEDLHSHLNTTETPLNALSEK
                     DLCPGSAVLDKINAGLR"
     gene            complement(9897..10868)
                     /locus_tag="VLJ17_13060"
     CDS             complement(9897..10868)
                     /locus_tag="VLJ17_13060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional helix-turn-helix transcriptional
                     regulator/GNAT family N-acetyltransferase"
                     /protein_id="HSV23946.1"
                     /translation="MTPSSNYPMLADMAGSARQDAQRVAAVRRFNRFYTQNLGVLQPG
                     WLDSAFSLTQARVLYEIKHRDRATATGIARDLGLDAGYLSRILQRFHKTGLIRKEVSP
                     QDLRQSYLSMTGRGQKAYAPLEARAKRQAGALLGRLTPPEQDHLVGAMRAIETMIASE
                     PKAQSEIILRDPRPGDLGWVVARHGELYAQEYGWAENFEGLCAQIVADFVGKYDPKYD
                     RCWIAEMGGRNVGAVFLVKDSEKVARLRLLLVDPVARGRGLGTRLTDECIRFARARGY
                     RSITLWTHKVLTAARRIYERAGFRLTSSEARRSFGQDVVSEHWDLAL"
     gene            10931..11128
                     /locus_tag="VLJ17_13065"
     CDS             10931..11128
                     /locus_tag="VLJ17_13065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23947.1"
                     /translation="MTVQRGAVPWQLFAPERPSSPLLQWAGWCISAIRDFSHAQYAIE
                     TAEIVVVDQGHQAERQQPAPR"
     gene            11467..11874
                     /locus_tag="VLJ17_13070"
     CDS             11467..11874
                     /locus_tag="VLJ17_13070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23948.1"
                     /translation="MTNTREKSEGMNAGFDMKTEIKKLAERIVEPVANKISAQELHCV
                     VGEICSAFEQLATKRTTPDTDFQSMAINIVKPVQPMLNEVEFARIVDRLRGAMAGFCQ
                     GDWSTAQPKKVEHNEATQMTTSFAASIAASPRQ"
     gene            12027..>13262
                     /locus_tag="VLJ17_13075"
     CDS             12027..>13262
                     /locus_tag="VLJ17_13075"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HSV23949.1"
                     /translation="MLSLGSRILAVIAAGVLFVSVHSIRAADFAGSVQGLVKDASGQA
                     LPGAYVKLINPERRLTFMLVSQAQGRYTMNNLPPGDYTVQGIGNGFQSKLTPVTLTAG
                     KSATADVSLTDKQGDVVPNGWIRRPGRVAGNELDHELPPPNLPEGEGKAIVEAKCGQC
                     HFLYRLTQMRWTQNNWEKKIAWMRERIHERQGAVDLTDQEEKTVVDYLAKNFSDTTPK
                     ADPNGRLSRTLLQGAAARYIAVDFAVPNSDAALHDIAVDAQGVAWVNELNEYKLGRFD
                     PKTYEFTEISPPPGPTKVGILNHMGPPVRGAGDSIWMAEVGANRRWLQFDTKYQQFTA
                     YPADFIRGQITGNSIKADPNGKMVWSTAGTRIVGLNIQTKQFTAYDIPHWVEKKEYPG
                     AYGLDVARDGRVWFAEREVH"
BASE COUNT         2854 a         3931 c         4026 g         2451 t
ORIGIN      
        1 ccacaactcg gctagattgg tcgcttcgca atcgcgcgcc tgtccgttga cgatcagttt
       61 catgtgggca ttcccctcgc gtgttccaat tcgcggtggc cgtctgcact gccaaatcga
      121 tcaagcccga acggccgcgc catcgcgggc agggcgccgt cagcgaccaa cgcctccatg
      181 gcgaacgccg ttgcgggggc taacagatag ccgttgcggt gatggccggt agcgagcgca
      241 aggccaggaa tcgacgtcgc gccgaggata ggggcgtcgt cgatcgagct cggccgcaag
      301 cctgtcgaca ctgcgtcaat cgccatttcc tcaatggctg gaaaggcgcg gcgcgcgcct
      361 tcgagcaata cgtaaaggcc acccgccgta atggcgtcgt cgaagccgcg ttcctcgacg
      421 gtggccccta cgatcagtcg gccgtcgccc ttaggcgcca ggtgaatctg ttcagtccac
      481 acaatgtggg ccagggttcc agtgtcgggc gtcgtccgca cggcaagcgc ttgacccttg
      541 agcggacgca ccggcaccgt aaggcccggc gggaggacgt cgctggtcca cgctccggcc
      601 gtgagcacga ccgtcgaggc ccggcatctt cccgtcgcta cgactagtcc aacgacccgg
      661 cctcctgcga ggtccacgcc tgaaacggcg caatgctcaa tcagacggcc gccggccgcg
      721 acataagcgg cgcgcaacgc cgcgatcacc agccgggggt cgacctggtg gtcagtagcg
      781 cagtaaagcc cggccgcaac tgaaggccgc agcgctggct ccatagcgcg aatctcggaa
      841 ccacttagcc agcgggtcga cagcccgcaa cgcttgtgga gatcatagcg aaaccgcaac
      901 cgttcgacct cgtcgcggcc aagcgccacc acgagcgtgc cgtcttcgcg aaaatcgatg
      961 tcgtggcccg attgtgcctc cagtgcggcg cgaaattgcg gccattgccg ctggctttcg
     1021 agtgcgagcg cgagcagatc gtgacagccc ggctcgtgct cggccgcggc cgccagcatg
     1081 ccggtagccg caaggctcgc gccggcgccc gcggtggctt gctcgaacac cgcaaccgag
     1141 aggccgcgca acgccagccg ccacgcgatc gacaacccga tgacgcccgc accgaccacc
     1201 gccacatcga cggcagttgg aatctcgaca acaacggccc tggagctgag tagcgcccgc
     1261 ctcttgccga tcgaccccct tagggacaaa ccagcctgca tcaaaatatc ctccacttct
     1321 cttcaggtgg agttcgccgc aggtggtgag gggcgcgatc tccaatccct acgccggtgc
     1381 gaaccgggtc aggttcaaag gatttccgcg ctgccgatcg gccagcggtt tctcagcccc
     1441 ttgtcgggga tctccctgga acgtgcctca tgtaatgccc ccacccgggc agggtcaagg
     1501 ggtggttgac cgtatcatcg ctttgcgcca cagacccaga tacacaatcc gcgcccacaa
     1561 ccagcggcgg cacaaacacg gggaaaacgc catgcagatc acgcgacgac atgtgctcgg
     1621 agccggcgcc agcgcactcg ctgttgcagc catgccgcgt gccctcgcgg cttgggagcc
     1681 gagcacgcgt tatccggatc cggccgtgca aattttggac ccgagctttg cgcgctaccg
     1741 tatcgtgcag gcaagcgtcg agcggctcta caccggcacc cgctggagcg aaggcccggt
     1801 gtggttcggc gatgcgcgct gtcttttgtg gagcgacatc ccgaacaacc gtatcatgcg
     1861 ctgggacgag atcacggggc gaaccagcgt ctaccggcag ccatcgaaca atgccaacgg
     1921 gctcgcccgc gaccgccaag gccggctcat cacctgcgag cacaaagccc gtagcgtcac
     1981 ccgcaccgaa tatgacggca cagtcaccgt gctgatcgac aagttcgacg gcaaaccgct
     2041 caattctccg aacgacgtcg tggtcaaggc cgacgggtcg atctggttct ccgacccctc
     2101 cgcacccggt ttcgacccct atgagggtcg cgtcgagcgc ccggagctgc cgaccaatgt
     2161 ctaccgcctc gatccgcaga ccggccgggc gaccgtggcg gccggcgatc tgcggcccaa
     2221 cggactgtgt ttctcgcccg acgagcgcaa actatatctc gccgacaaca gcgtgacccc
     2281 gcgcgtgatc cgcgtctacg acgtggtgga cgacggcgcc aagatcgcca accctcgcgt
     2341 cgccgtcacc tgcgacgccg gcaccattgc ggacggcttt cgttgcgatg tcgacggcaa
     2401 tctttgggtc ggggctgggc cgggcgagga cctcgatggc gtaaaagtgt acaacccgga
     2461 cggcaaaccc atcggcagaa tcgccttacc ggagcgttgt gccaatctca ccttcggcgg
     2521 cgtctaccgc aaccgcctgt tcatggcggc aagccattcg ctctattcgc tttacgtgaa
     2581 cacccaaggc gtggcggggc gctgacaccg cttccacatc gggggtacgc cggggtgagc
     2641 tagccgatgg tggacgaaac cgattcagca ccgcacgata tttatcgtgt gctctacttc
     2701 atctttttcg tcggcatctt gtaaagcaat cgtcacggtt tcggtttggc atccgcggcg
     2761 atagattgga tccggatagg cgctccttga aaccgcaaga ccacttggaa acgcgcccgt
     2821 cgtaacgtca ggctcaacac gaggcggtag gtaggtcggg gctaaaaagc ccggtgcatc
     2881 taagccattt acgacaacac cgcgtgcaat cagcggaatc ccgaagccga agcggtgctg
     2941 atgaaaagac aatcgtgcgt gcgaaagtac gtggcttggc gctcggaggc tatgtgtgcg
     3001 aaagcccctc gaggctgaaa acgatttgcc gccgaatcca cttctgtggc ccacggtctc
     3061 gcttgaagaa gtaagcatca atcctaagct aagagcgcca gccaagccgg ccgcagacat
     3121 tcgacggaac atcggtcgca ccattcgtac gctgtgcagc cgcatcgaag ctagactacc
     3181 gcagacgatc gctcccacca agtcgtatta ataatttggt tagcgcgccg cgcccgttgc
     3241 tgggcacgcg ttgccgggca acgcacggtc agtaagtccg tcttctgtca ttccgcaccg
     3301 gcaactcatc ctgaggtgga agcggtatga cacgcccctg ttggtggtgc cggcgtcgga
     3361 aggagtgtac aagtaccggg gcgaattgcc aaagtatgca gtgttaattt gaactcaagc
     3421 gcgaacaagc gactgcgtac ttagtcccgg gaggttaatc atgcgaagaa cacccgcatt
     3481 tttttgctgg tttgtttttc tgtgcgcgct ggtgccggct catgcgcagc agactgtcaa
     3541 gatcggcctg atcatgacct attcgggtca attcaccgat ccggcagcac agatggacaa
     3601 cggaatcaaa ctttatatgc agcagcacgg cgatgtcgta gccggcaaga agatcgagat
     3661 tgttcgccgg gataccggcg gggcgccgga ttccgccaag cgcctcgctc aggaactcat
     3721 cgtgcgtgac aacgtcgata tcctggcggg gttcgtgatc acgccggagg cgcttgccgt
     3781 tgccgacctg tcggcggagg caaagaaatt tatggtagtg atgaatgcgg ccacttcgat
     3841 catcacgacc aagtcgccgt acatgacgcg agtttcgctg accttgccgc aaaactgcga
     3901 gcaactcggg acatgggctt tcaagagcgg aatccggaaa gtctacacta tggtctcgga
     3961 ctacgccccg gggcacgacg ccgaagcgtc gttccagggc gccttcaagg cggccggcgg
     4021 ggaaatcgtc ggtgcagcac gcatgccagt ggccaccgtc gatttttctg cgtttgttca
     4081 gcgcgtcaag gaccaggatc cggaggcaat ctttgtgttc attcccggtg gctcccagcc
     4141 gccggcgttg gcaaaggctt tggtcgagcg tggcatcgat gcgaagagaa tcaaggtcat
     4201 ggggcaaggt gagatcgccg aggaatccgc cctggcggga atgggcgatg cggcaatcgg
     4261 catcatcacg gcgttccatt acgactacaa tcacccatcc gagaccaacg gaaatttcgt
     4321 caaggcttac aacgccgagt tcaagcgcaa tcctgatttt ttttcagccg ggggctacga
     4381 cggaatgcat ctcatctacg aggcgctcaa gaagagcggc ggcaaggcag atggcgagga
     4441 cctgatcgcg gccgcgaagg ggatgaaatg ggagagtcca cgcggaccca tgtcgatcga
     4501 tccggaaacg cgcgacgtga tccagaccat ctacattcgt cgcgttgaaa aagtgaatgg
     4561 tcaattgcgc aacgtcgaga tcgaaaagtt cgagaatgtg aaggacccgg tcaaagctcg
     4621 catgaaatag cgctggcata accgaccaac atgggcggcg tcgcttcggc ctccggtcag
     4681 gatcgtccaa cgctgtcagg ccggcttggc gcccgctgac ggatcgcgaa aaagaatcgt
     4741 ttcgcaaacg attccgcctg tcattttatc gtggtaatct ggctccacaa gggcgggcgc
     4801 ctgatcgcgc aaaaatgcgt ccttggtaat catcctaggt aatcatctcg gtagcgatga
     4861 agggaggatc ggaatgaaat acgctttgat gatttcggct gcgctgctga tggccttggc
     4921 cttgggcgag gggcagcaac cggcatccgc gcaatcaaac ccgctcgacc tggtcaagca
     4981 gggtgtcgag gcgcaaggcg gcgcagatgc actgcgcgct atcaagacgc tcaccctaaa
     5041 ggctgacgcc aagcattggg agccgggcca gtccaatagc gtcaacggcg agtcgcgctt
     5101 ccttggcgac tctacggtca ccaccacgat tgactacacg aaccaggtcc gcgtccgcta
     5161 cgattgggac cgtgacatga aatatccggc tgtcgagaag gtgaaataca gcgaggtcag
     5221 atacccgacc tacggtgctg tcttcgacga caagggcgaa gccaagccaa tgtcaggggt
     5281 tcggttggcg gcgaatatac gcgagggcgg ccgcggctct gcgaagctgc tgctgaatgc
     5341 gctggacgcg ccgcagggcc tttcggcaat tgaggaccaa aagcttggtg atcagacttt
     5401 gccggcggtc gcgttcgcac agggatctgt caagtacatt atcatcttcg atcgctccac
     5461 caagctgccg gcggcggtgc gcacgcgcga cgaagacaat atctgggggg attcgaacta
     5521 cgacgtggtg ctgagcgatt ggaaggccgt cggcggcgtc aagatggcgc atacgcggtc
     5581 gtataggctc ggcaacatgg aggtgcagcg gctgacctac aaggagataa gcgtcaacac
     5641 gccgatcgcg cccacgacct tcgatattcc ggacgccgtc aagacggcgg cgaagccgcc
     5701 ggcgaccggc aacgtgccgt accagtgggt gatccgccgc atcttccttg ctcgcttcac
     5761 cgacagcgac gcgatctact tcccgccggg cggcagtttc aagctggtcg agcttgcccc
     5821 caatgtccag atggttcagg gcggcggcgc caacaacctg atcgtcaaca tgaaggacgg
     5881 gcttgcggta ttcgacgcgc ctaccgatga aggccagtcg aaatgggtca ttgacgcggc
     5941 gaaagccaag tatccgggca agccgatcaa gtatctcgtg ctgacccacc accatatgga
     6001 tcacaccggc ggcatgcgtg cctacgcggc cgaaggcgcg accgtcatcg tacctgcccc
     6061 cgacaaggcc tattttgagc aggtcgtgaa ggccccacat gcattagagc cggatgccca
     6121 gcagaaggcc atgaagccgg tgaccgtcca ggaggtgaag gataccttct cgatcaagga
     6181 cgatacggcc gagattaacc tctacaacat cccgaacccg catgtggacg gttatctcct
     6241 ggctcacgtg gccaaggata atattctttg gatcacggac ctgatatcac cgcgcggacc
     6301 tatcgctcgc aaccccgcga cggtcgcggt gggtgaggct ctgcgtaagc acaacatcac
     6361 cggcgctacc atcgccggcg gccatggcac gaccgccaag caggcggaca tcgcaccggc
     6421 gctggcgatg aactagccga atggtgaaac gaaacccgcg gcgtccggtg cgcagccggg
     6481 cgccgtgcta cgcggacagc ccttccgcgc atcaggcagg cgaggttcac gcatgatgag
     6541 acggcgggac ttcattgctg ggctcggcag cgtagtggca attttgcgcg cggcgcgtgc
     6601 ggaggaaccg acgcgacggg tcggcattct gctgttttcg gcggaggacg atccggtcac
     6661 ccaaacccgg ttggcagggc tgcgggacgg gctcgaagcc gcgggctggg ccgaaggtcg
     6721 caacctacag atcgattatc gctttggtgc cgctgatccg gcccggcttc tttcttacgc
     6781 cgacgagttg gcgaagatcg ctcctgatgt catcgtgacc ggcggtgcac cggccacaaa
     6841 tgcggtgcaa aagctcaccc agacaattcc gatcgttttc gtggaggcca caaacgaaat
     6901 cggctatggg gtgatgagaa acctcacgag cctggacggc aacgccaccg gcatcactaa
     6961 tttatacttg gcaatcggaa cgagatggct ggagctgctt cgagaggctg ctcctcgcgt
     7021 taccagggtt gcacttctct ttaatccgga attcgatagt cgaagttaca ttgccgcgat
     7081 agaggcgtcc gcgacagcgt atgacgtgaa ggccgtcaga acgccggttc gtaacgctga
     7141 ggagatcgag cgcgcgatcg gcacgttcgc ggccgaaccg aacggaggct tgctgatcgt
     7201 gccgcccagc ccggccttcg ccaacatcca actgatcttc cgattggcga aacggtatcg
     7261 aatgcccgcg atctatccga cgagaggctt cgcggctgaa ggtggcctga tggcctatgg
     7321 accgaacagc gctgagctgt tccgcagcgc ggcaactttc gtcgaccgca tcctgcgcgg
     7381 tgcaaggccg agcgaactgc cggttcagtt tcttaccaga ttcgagttgg tcgtgaatct
     7441 caaagtcgca agggcgatcg gactcgagat tccgagcggc ctgattgccc gcgccgccga
     7501 ggtgatagaa tgaagagcga gagtgccacg ggatgatgga tcgggtattc ggggcgatcg
     7561 cactgagcct catgatgaca gtccacgcca cggccgctga tgacacgacg gcgccggttg
     7621 tctcgacgga gacaatgcct tcactcgccc cgattctcaa gaaaatcact ccggccgtcg
     7681 tcaaaatcga ggtcaagggc cgcgtcacgg tgacgacaaa tggcaggaaa cgcgacatac
     7741 gcgaaattca tgaggtaggg tccggcgtgg tctatgatcc gaaccagggt ttgatcatca
     7801 ccaatcatca cgtcatcgat cacgcgtacg aaataaccgt aacgcttacc gacggccgca
     7861 gtctgaatgc aaaacgtctc ggcgccgacc ccgatttcga tgtggccatg attaaggtac
     7921 aggcagataa tctgccgtcg attccgtttg gcgattccag ccaacttgag gtcggcgaca
     7981 tcgtactcgc cattggttat ccgatgaata tggcgcagtc ggtgacctcg gggattgtcg
     8041 gcggactgca tcgaaccaat attgggatcg agcagcatga aaactttatc cagaccgatg
     8101 cggcggtgta tccgggaaat tcaggcggtg ctcttgtcaa catcaaaggc gatcttgttg
     8161 gcatcaacac ggccttcatc ggttccacca atagcaatcc cggcgtggga tttgcgattc
     8221 ccataaacat gtctcgtata attgcgaatc agattctgaa atttggcgat atccgtcgcg
     8281 gctcgctcgg gatcacgatc gaagacccga cgcctgccat gattcacgac atcaagccga
     8341 ctagaccgca atctgtcgcc gtgatcacga gggtcaatcc cggatcagcc ggagagcgcg
     8401 ccggattgaa gtccggcgac ctcgtcacca agttcggcga tgtggcggtg cgaagtgcat
     8461 cttttctgcg caccaggatc gcgctcctca ggatcggtga gacagccgag cttgcgatac
     8521 tgcgcgaggg aaaaccgatg accgttcggg cgatcatggc ggagcggcag ccacgattat
     8581 ccgcaaaata gcagtgccct ggagcatcgc tgtaggatgt gctatcgatc tgcccggtaa
     8641 gcccaaatcg acggccgccg aggccacggg gcgggacgaa aacacgataa aattcaactt
     8701 cttgcagata gaatgcgatc atgacgtatc tggcaaagcc gaaattccac caccccgacc
     8761 tgccgacaaa tcgactgggc tatacacacc gcgattatga gggcaagatc tcgacgttat
     8821 gcgcgggttg cgggcatgac tcgattaccg cctcgattat cgaggcctgc tttgaattgt
     8881 ccatcgcgcc ccatcgggtg gctaagatat ccggcatcgg ctgctcgtcg aagacgcccg
     8941 attatttcct cggcaattcc cacggcttca attcggtaca tggccgcatg ccgtcagtac
     9001 ttaccggcgc gaacctggcc aatcgggatc tcatctatct cggcgtctcc ggcgacggcg
     9061 attcagcatc gatcggcgtt ggccaattcg ttcatgccat ccggcgcggc gtcaacatgg
     9121 tctatgtggt ggagaataat ggtgtctacg gcctcaccaa gggccagttc tcagccactg
     9181 ccgaccgcgg ctccaagtcc aagaaaggca taatcaacgc cgacagcccg atcgacatgg
     9241 tggcgatggc gctgcagctt ggcgcttctt tcgtggcgcg ttctttctcg ggcgacaaga
     9301 gccagttggt gccgctgatc aaggcagcca tcgaacatcg aggcgcggcc tttatcgacg
     9361 tgatcagccc ctgcgtcgcg ttcaacaatc atgctggatc gaccaagagc tatgattacg
     9421 tgcgtgagca caacgaagcc gtgaatcgcc ttgatttcat caccggccgc gatgcgatcc
     9481 atgtagacta tgcgcccggc gccgtgcaga cggtcgagca gcatgacggc acgacgctgg
     9541 tgctgcgcaa aatcgacgcc gactacgacg tgcatgatcg actggcagcg atgagcttcc
     9601 tccagcaaca caccgccgag ggccaggtgg tgaccggtgt cctctatctc gaccgggagc
     9661 ccgaggacct gcacagccat ctcaatacca ctgagacgcc gctcaacgcg ctctcggaaa
     9721 aggacctgtg tccaggctcg gcggtattgg acaagatcaa cgcggggcta cggtaggaga
     9781 cccacggcga ttgtgccccg gtgtccccgg agcgacgcgg gaccgactgc cgctggcgag
     9841 ggggccgtgc ctcttgcgcg aactgggcaa agcatacgcg cgctggcgcg cccgagctac
     9901 agcgccaaat cccagtgctc gctgacgaca tcctgaccga agctgcgccg cgcctcactt
     9961 gatgtcagcc ggaaaccggc gcgctcgtaa atacggcgcg ctgcagtgag caccttgtgc
    10021 gtccagagcg taatgcttcg atatccccgc gcacgggcga accggataca ctcatctgta
    10081 aggcgtgtgc ctaggccacg cccgcgcgcg accggatcga ccaggagaag gcgcaggcgg
    10141 gcgaccttct cggaatcctt caccagaaag acggctccga catttcggcc acccatttcg
    10201 gcaatccagc agcggtcgta tttcggatcg tacttgccga cgaagtcggc gacgatttgc
    10261 gcacaaagac cctcgaaatt ctctgcccag ccatactcct gcgcgtacag ctcgccgtgc
    10321 cgggcgacca cccagccgag atcgccgggc cgagggtcgc ggaggatgat ctcgctctgg
    10381 gctttgggtt ctgacgcaat catagtctcg atggcgcgca tcgctccgac cagatggtcc
    10441 tgttcgggcg gggtcagccg gccaaggagt gcgcccgctt gacgcttcgc gcgcgcctca
    10501 agcggcgcgt aggccttctg gccgcgcccg gtcatcgaca ggtagctttg tcggagatcc
    10561 tgcggcgata cctccttacg gatcagtcca gtcttgtgaa accgctgcag gatgcggctc
    10621 aggtacccgg catcaaggcc gagatcgcga gcgatgccgg tcgccgtcgc gcggtcgcga
    10681 tgtttgatct cgtaaagcac gcgcgcctgc gtcagcgaga acgcgctgtc gagccaaccg
    10741 ggctgcagca cgccgagatt ctgcgtgtaa aagcggttga aacggcgcac cgcggcaacg
    10801 cgctgcgcgt cctgacgtgc ggaacctgcc atgtcggcca gcatcgggta gttacttgac
    10861 ggagtcaagt aactacccgg accgagggaa agaggtctcc cacaaataaa tgcaggcatg
    10921 gtagtccggc atgaccgtcc agcgcggtgc agtcccatgg cagctttttg ctcctgagcg
    10981 gccatcgagc cctctgctgc aatgggccgg ctggtgcatc agcgctattc gcgatttctc
    11041 ccatgcgcag tatgcgatcg agacggcgga gatcgtggtg gtggaccagg ggcaccaggc
    11101 agagcgccag caacctgcac cgcgatagga cgaccttcag ttgtcgttcg gtgcgtcgtg
    11161 acggtcgaaa tgacggcagc acctgttccg ctggtgccat cagacaccag catagaagac
    11221 gcagatatgc ttgtcatgag tgtgctattg ctgggccaat tgagttccaa tacgaggagg
    11281 tgcattgacg gcaggattgg aacattcccg gagaccaagt acttacagaa gatagcagtt
    11341 tcacatgggc ggcaagtaat gttcaccgca gcgaatctag tcagaatcct ctggtccctg
    11401 ttaggcctat tgactcgaag gcgggtaaag gggagcgatc gtagcaacaa tgaagccctt
    11461 acggtagtga ccaacacgcg cgaaaaaagc gaagggatga atgcaggttt cgatatgaag
    11521 acagagatca aaaaactggc tgagcgcatc gtggaaccag tagcgaacaa gattagcgct
    11581 caagagctac actgcgttgt tggcgagatt tgcagcgcct ttgaacagct agcaaccaaa
    11641 cgaactacac ccgacactga cttccaaagc atggcgatca acatcgtaaa gccggttcag
    11701 ccgatgctca atgaggtcga gtttgcaagg atcgtggatc ggctccgagg agcgatggct
    11761 ggattttgcc aaggcgactg gagcactgcg caacccaaaa aagtggaaca caacgaggcc
    11821 acgcagatga caacctcttt cgcggcctcc atcgctgctt cgccgcgaca gtgatgtcgg
    11881 aatgcagtct gcagttcctg tttttcgcca atcccgcgtc tcggagaaaa agcgctgtcg
    11941 gagggcgcgt ttgtacgcaa aagagtgtac actctcagca gccgaaaggc caaaaagtcg
    12001 attgtggcca agggaggaga aaagcgatgc ttagtcttgg gagtcggatc ctagctgtaa
    12061 tcgcggctgg agtgctgttt gtcagcgtcc actcgattcg agcggcagac tttgccggca
    12121 gcgttcaggg gctggtcaag gatgcatccg ggcaagcgct tcccggagcg tatgtcaaat
    12181 tgatcaatcc cgagagacgt ctgacgttca tgctcgtcag tcaagcgcaa ggccgttaca
    12241 cgatgaacaa cctgcccccg ggggattaca cggtgcaggg tatcgggaac ggcttccaga
    12301 gcaaactcac accggtgact ttgacggccg gcaagtcagc gacggcggat gtgtcgctta
    12361 cggataaaca aggggatgtg gtgccgaatg gatggattcg gagacctggg cgcgtagctg
    12421 gcaacgaact ggatcacgag ttgccgccgc cgaatctgcc ggaaggggag ggcaaagcga
    12481 ttgtagaagc gaagtgcggc cagtgccatt tcctgtatcg gctgacgcaa atgagatgga
    12541 cccagaacaa ctgggagaaa aagatcgcct ggatgcgaga acgcatccat gaaagacagg
    12601 gtgccgtcga tttgaccgat caggaagaaa agacggtggt ggattatctg gcgaagaatt
    12661 tttcagacac cactccaaag gccgatccca atggccgctt atcgagaacc ctgctgcagg
    12721 gtgccgccgc ccggtatatc gcggtggatt ttgcggtacc gaattccgac gcagcactcc
    12781 acgacatcgc ggtggatgca cagggcgttg cctgggtgaa cgaacttaac gaatacaagt
    12841 tgggaaggtt cgatccgaag acatatgagt ttaccgagat cagtccgccc cccgggccaa
    12901 cgaaagttgg tatcctgaat cacatgggtc cgccggtgcg aggcgccggg gactccatct
    12961 ggatggccga ggttggcgcc aaccgccgct ggttgcagtt cgacaccaag taccagcagt
    13021 tcaccgccta tccggccgac tttatcaggg ggcagatcac cggcaacagt ataaaagccg
    13081 acccgaatgg gaagatggtc tggtcgactg ccggcacccg aatcgtggga ctgaatatcc
    13141 aaaccaagca gttcaccgcg tatgacattc ctcactgggt cgagaagaag gagtatccgg
    13201 gcgcttatgg gctcgatgtc gcgcgcgatg gaagggtttg gttcgccgag cgggaagtgc
    13261 ac
//
LOCUS       DATILV010000561         5586 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1412897, whole genome shotgun sequence.
ACCESSION   DATILV010000561 DATILV010000000
VERSION     DATILV010000561.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5586)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5586)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5586
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1412897"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1284)
                     /locus_tag="VLJ17_13080"
     CDS             complement(<1..1284)
                     /locus_tag="VLJ17_13080"
                     /inference="COORDINATES: protein motif:HMM:NF021593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2325 domain-containing protein"
                     /protein_id="HSV23950.1"
                     /translation="MSSRAADLWSNTFSGGLEPKTQWRSGSMLPMKVRGPDESFDEFM
                     QPVSKKRTAIWNMHPSVHCSIIGTCLSSGEIRRLLIKFGVYGAESASDHDLHKQGVAL
                     AGKPQGGGKFIQKALDRRHDTAIKQFARAKDEETLNRLWEEAVRRGDIPGAYWALLSH
                     PAATDTIMRKTFGDVHMLSHMVGAANRADIRRLRQLEEQNAVLSAKLDSQQRQLRDGF
                     TERDCKIRLLNGALSRALAQTPVLAENANDDARAAKEALIDLERRLNREVTRRERLES
                     RLEAAMLAQSKAEHARHDAERECEGLRRELALAEAQVSGWLAEDLKSVVPELVGVQVL
                     YVGGRTHQVPQLKAMVERVGGTLVHHDGGVEHSMTLLPGLISRADCAVFPIDCVSHDA
                     MGVLKRQCRQSVKPFIPLRTSSLASLLSGLATLNKT"
     gene            complement(1420..1851)
                     /locus_tag="VLJ17_13085"
     CDS             complement(1420..1851)
                     /locus_tag="VLJ17_13085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23951.1"
                     /translation="MIANDTQTTAQTQEVREPPFVTDVYGEVAPNGKAVGLRIQRSDQ
                     GPVDLCLRTQDLQFMVSIMLALGCEAKRVQGLHEPEAAPNGAVPLPLSAINIGQDDQN
                     QTFLMLEVGSAALMFSVPSDVLEELGRTLLALSARESNKPS"
     gene            complement(1880..2452)
                     /locus_tag="VLJ17_13090"
     CDS             complement(1880..2452)
                     /locus_tag="VLJ17_13090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2478 domain-containing protein"
                     /protein_id="HSV23952.1"
                     /translation="MRFDAQCDVATVVYGADDDPDRLLMCFADDLRRVGGRPVGVVQA
                     GRSCQAENPRLGFVVLPGGENVCLLPPIEGRGAACRLDVGRLTELAKRLAAALEDGAD
                     LVVINRFGRAEAEGGGLIDLISQAVDSDIPLLIAVPERRFSDWVRFSCGMNVRLACRR
                     EALDRWWRSVAGIDMRSRRSAARTFCELTK"
     gene            2599..3342
                     /locus_tag="VLJ17_13095"
     CDS             2599..3342
                     /locus_tag="VLJ17_13095"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HSV23953.1"
                     /translation="MIEFVLEFVLAYFSSLYTIGYNAGDGPRQSDTHACFYRFTIDRR
                     CANSGRKKMKLLFVFLTSVVMASTVAHALDAASVPPIKRTKVGQYLSAQEAASFVTKS
                     GSKTLFLDIRTPAEVMFVGMPTMADANVPYMVEPDFPSWDEAKATLKLEGNSDFVSEV
                     RRRLNEKRLGSDSSIVLICRSGDRSAAATNLLTEAGLKNVYSVVDGFEGDLAKDGPKA
                     GQRVVNGWKNAGLPWSYTLDRKKMYKLDK"
     gene            complement(3396..4892)
                     /locus_tag="VLJ17_13100"
     CDS             complement(3396..4892)
                     /locus_tag="VLJ17_13100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007615090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HSV23954.1"
                     /translation="MNVTQRIEATRHPFLDGKTKRLLINGKWVEALSGKTFDSINPAT
                     GEILASVAEGDAEDIDRAVKAARQAFDGPWSKVKPSERQLLLLKLADLVERHFEELSM
                     LDTLDMGAPISRTLGTRHRVLGMLRYYAGMATALHGETIENSLPGEIFSYTLKEPVGV
                     VGAIIPWNGPLGASVWKIGPALATGCTVILKPAEEAPLTPLRLGELILEAGVPPGVVN
                     IVPGYGETAGAALAAHGDVDKIAFTGSHLTGQKIIAASAGNLKRVSLELGGKSPDIVF
                     ADADLESAVPGAGMAVFANSGQICSAGTRLFVEHHIYDEFVGRVANFGNGLRVGNGID
                     PQTQIGPLVSEQQLERVSDYLSIGKLEGARAVSGGDRLTEGAYAKGYFVPPTVFADVH
                     DNMRIAQDEIFGPVLSAIRFEDIDEVVSRANATSFGLGSGVWTRDVTKAHRLAKAIRS
                     GSVWVNCYQAMDPAVPFGGYKMSGYGRESGMQHLDEYLNVKAVWIKTA"
BASE COUNT         1191 a         1703 c         1524 g         1168 t
ORIGIN      
        1 tgtcttgttc agcgttgcaa gtcccgaaag caagctcgcg aggctcgatg tgcgcagtgg
       61 aatgaacggc tttacggatt gccggcactg ccgcttcaac acacccatcg catcgtgact
      121 gacacaatcg atcggaaaca ccgcgcaatc agcccgactg atgaggcccg gcagcaatgt
      181 catgctgtgt tcaaccccac cgtcgtgatg aaccaaagtg ccgccgacgc gttctaccat
      241 ggccttgagc tgcggcacct ggtgagttct gccgcctacg taaagcactt gcacgccaac
      301 tagctcaggg acgacggatt tgaggtcttc agcaagccaa ccactaacct gcgcctcggc
      361 gagcgccaac tcccggcgca gcccctcgca ttcccgttca gcgtcatgcc gagcgtgttc
      421 ggccttagac tgcgcgagca tcgcggcctc aagacggctc tccaggcgct cgcggcgagt
      481 gacctcccga ttcaaacgac gctcaaggtc gatcagtgcc tccttagcgg ccctggcatc
      541 atcattcgcg ttctcggcta agactggcgt ctgcgccagc gcccggctca gggccccgtt
      601 gaggagacgg atcttgcagt cgcgctcggt gaagccatcg cgcaactggc gctgttgcga
      661 atcaagcttg gccgacaaca cggcgttttg ttcctcaagc tggcgtaggc ggcgaatatc
      721 ggcgcgattt gcggcgccaa ccatatggga cagcatatgc acgtcgccga acgttttacg
      781 catgatggta tcggttgccg ccgggtggct gagcagcgcc caataggcac cgggaatatc
      841 gccgcgcctg accgcctcct cccaaagccg gttcagcgtt tcctcatcct tggccctggc
      901 gaactgcttg atggcagtgt cgtggcgccg gtccagtgcc ttctgtatga attttccgcc
      961 cccctgtggc tttcctgcga gcgccacacc ttgcttgtgc aagtcatggt cgctggcgct
     1021 ctccgcgcca tagaccccga acttgatcag caggcggcga atctccccgc tcgaaagaca
     1081 ggtaccaatg atcgagcaat gcacgctcgg atgcatgttc cagattgccg tgcgcttctt
     1141 cgaaaccggc tgcataaatt cgtcgaacga ctcatcgggc ccgcgcactt tcatgggaag
     1201 catgctgcca gaacgccatt gcgttttcgg ctcaaggccg ccggagaagg tgttcgacca
     1261 caaatctgcg gcgcgtgatg acatgattgc acgctatatt cattacaata tagcgaatgt
     1321 tgcatataat tgcatttctg aaaagaggaa atgcaaagaa ctctgcttgg ctccccagaa
     1381 cgacaaaact cagcctggcg ttccggtcca gttaatgctt tacgacggct tattggattc
     1441 gcgcgcactc aaagcgagca acgtccgacc aagttcttcc agcacatccg aaggcacact
     1501 gaacatcagc gcggccgatc cgacttcgag catcaagaag gtttggtttt gatcgtcctg
     1561 accaatatta atcgcactga gcggcagcgg aaccgcgcca ttcggggccg cctccggttc
     1621 atgcagcccc tgtacgcgct ttgcttcgca accgagcgcg agcattatgc tgaccatgaa
     1681 ttggaggtct tgggtgcgca ggcagaggtc taccggcccc tggtcgctgc gctgtatgcg
     1741 caggccaacc gccttgccgt tcggcgcaac ctctccatat acatctgtta caaagggagg
     1801 ttctcgcacc tcctgcgtct gcgctgtcgt ctgtgtgtcg ttagcaatca ccagatgctc
     1861 ctcgggacag acagctgccc tatttcgtca gctcacagaa ggtacgagca gcacttcgac
     1921 gacttcgcat gtcaattcca gcgaccgagc gccaccaccg gtcgagcgcc tcgcgccggc
     1981 aggcaagcct gacattcatg ccgcaagaaa atcggaccca gtctgagaag cgtcgctccg
     2041 gtacagcgat gagcagcgga atatccgaat cgacagcctg cgaaatgaga tcgatcaacc
     2101 caccaccttc ggcctcagcg cgaccaaagc gattaatgac caccaaatcg gctccgtctt
     2161 caagtgcggc ggcaagcctc ttcgcgagtt cggtgagccg tccgacatcg agccggcatg
     2221 ccgcaccgcg gccttcgata ggcggcaaca ggcaaacatt ttcgccaccc ggcaggacga
     2281 cgaaaccaag ccttgggttc tcggcctggc agctgcggcc agcctgaaca acgcccaccg
     2341 ggcgaccgcc cactcgacgc aaatcgtccg caaagcacat cagcaggcga tcaggatcat
     2401 cgtcagcccc atagacgacc gtagcgacgt cgcattgcgc atcaaacctc acgcggcaca
     2461 cctcaatgga gcgatgtatt ccgcaggata tatcgaactg cgtagtctgg caagctgcat
     2521 cgagccaacg gcctggcaac gcgctcaacc agaaggttgg atgcccgtcg ggtcccagac
     2581 accgtctcac ttcatgtcgt gattgaattt gtgcttgaat ttgtgcttgc ctatttttcc
     2641 tcattatata caataggata caacgctgga gatgggccaa ggcaatcgga tacgcacgcc
     2701 tgcttctacc gttttacgat cgatcgaaga tgcgccaact cggggagaaa aaaaatgaaa
     2761 ctccttttcg tctttttgac gtctgttgtg atggcctcga cggtggcgca tgccttagac
     2821 gctgcttcag tgcccccgat aaagcggacc aaggtggggc aatatctttc ggcccaagag
     2881 gcagcgagct ttgtcaccaa atccggttca aagaccttat tcctcgacat acgaacgcct
     2941 gcagaagtga tgttcgtggg catgccgacg atggcggatg ccaatgttcc atacatggtc
     3001 gagcctgatt tcccctcatg ggatgaggcg aaggcgacct tgaagctcga aggcaattcg
     3061 gatttcgttt ccgaggtacg ccggcgatta aatgagaaga ggctcggctc cgatagctcc
     3121 attgttttga tttgccgttc gggcgatcgc agtgcagcgg caaccaatct tctcaccgag
     3181 gcgggcctta aaaacgtata ttccgtggtc gatgggttcg agggcgactt ggcaaaagac
     3241 ggaccaaagg ccggtcagcg tgtcgtcaat gggtggaaaa acgctggcct tccgtggtcg
     3301 tacactctcg acaggaaaaa aatgtacaag ctcgacaaat aaggtcgatg acggcgcatg
     3361 ccgattgcga tgcgccgaat cgattgacag gcgcctcagg ccgtcttgat ccagacggcc
     3421 ttgacgttca ggtattcatc cagatgctgc attccggact cgcgcccgta gccgctcatc
     3481 ttgtaaccgc cgaacggcac cgccgggtcc atggcctggt agcaattcac ccacacggag
     3541 cccgagcgaa tcgctttcgc taggcgatga gccttggtga catcacgcgt ccagacgcca
     3601 cttccgaggc caaaagacgt cgcattcgcc cgactgacca cttcgtctat gtcttcgaac
     3661 cgaattgccg acaggaccgg gccaaagatt tcgtcctggg caatccgcat attgtcatgc
     3721 acatccgcaa acactgttgg cggcacgaaa taccctttag cgtatgcccc ctccgtcaat
     3781 cgatcgccgc ccgagaccgc acgggcacct tccagcttgc cgatgcttag atagtcgctg
     3841 acgcgttcca gttgctgctc cgaaacaagc ggtccgatct gcgtctgggg atctatgccg
     3901 ttgccgaccc gcagcccatt tccgaagttt gcgacgcggc ccacgaactc gtcgtagata
     3961 tggtgctcga caaaaaggcg cgtccctgca ctgcagatct gaccagagtt cgcgaacacc
     4021 gccatcccgg cacctggcac ggcgctctca agatctgcat cggcgaatac gatgtcgggc
     4081 gactttcccc cgagttcgag ggacacgcgt ttaagatttc ccgcggaagc cgcgataatc
     4141 ttctgaccag tcaggtggga cccagtgaag gcgatcttgt caacgtcgcc gtgcgcagcc
     4201 agcgccgcgc ccgcggtctc gccatatccg ggtacaatgt tgacgacacc cggcggcacg
     4261 ccggcctcga ggattaactc gccaagacgc agcggcgtca gcggcgcctc ttctgccggc
     4321 ttgagaatga cagtgcagcc ggtcgccaat gccgggccga tcttccatac tgaggcaccc
     4381 aacggaccgt tccaaggaat gatcgcgccc acaacgccga ccggttcctt caaagtatag
     4441 gaaaagattt ctcctgggag tgaattttcg atggtctccc catgcaacgc cgtcgccatc
     4501 ccggcatagt atcgcagcat gccgagaacg cggtggcgtg tgcccaatgt gcggctgatc
     4561 ggtgcgccca tatcgagcgt atcgagcatg ctcagctctt caaagtgccg ctcgaccaga
     4621 tccgcgagct tgagtagcaa cagctgtcgc tcggacggct ttaccttact ccacgggcca
     4681 tcaaatgcct gtcgtgcggc cttcacagcg cggtcaatgt cctctgcatc tccctccgcc
     4741 accgacgcca ggatttcgcc ggttgctgga ttgatgctat cgaaggtctt gcccgacaac
     4801 gcctcgaccc acttaccatt gatcaacaat cgcttggtct ttccatccaa aaacggatgg
     4861 cgcgtggctt cgatccgttg agtgacattc atggcttgtg gtcccgtgtt ttgcattcgg
     4921 ttgggcagac ttgcggtggc tctttgccaa ggagagcatc ccgccgataa agcgaagcgc
     4981 gttcaccgtc gcgtcgattt tccttgagtg agtgaccggc ttccgttcga cggagtatgt
     5041 atccaagtcg gatgatggca ttacgtctta tcatctcgtc gtctcgcatc ccgttataaa
     5101 tagccgaata tatcgcgtct ggaaagcacc taccaactcc gagcccctcc gttgccttcg
     5161 atggatgacc ggcggcgatg tacttggcga tgtacttggc gacgtacttg gcgacgtgac
     5221 cagagtgagt tttctttgct cgttatatgg ttcaaccaac agaaacattg cggcagccgc
     5281 tcgctcggtg ggggccttaa aggaacaacg gtgaccagtc attccgttgt gaaaaaacgc
     5341 cccttaggct gaacggaagc caccacttgg gggcgcggct tgttgaccgc caagctcaag
     5401 agagagcaag cttggcggag acggacgcgc gacagcatcc gcgctgcgcg gtcgataatc
     5461 ttgcttatgg tcatcgtatc gagccgatcg cttgagctaa gcacgtccgc ctcaaggtca
     5521 agccgcgctt atatggcagc tgcccaaggc ctgacctcga taccgggaat taaaggaaaa
     5581 aggacc
//
LOCUS       DATILV010000562         5245 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_131605, whole genome shotgun sequence.
ACCESSION   DATILV010000562 DATILV010000000
VERSION     DATILV010000562.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5245
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131605"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..485
                     /locus_tag="VLJ17_13105"
     CDS             <1..485
                     /locus_tag="VLJ17_13105"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HSV23955.1"
                     /translation="LAQVLGGGETSRLYRALVVDQHIANGAGGWYQGTALDESRLGVF
                     ANPQPGVTFAAIEAAIDAVIDNIAESGVTPAEFERAKTRLIANAVYAEDNQASMARWY
                     GAALTSGASVEQVTSWPARVRAVTPEAVQNAARMWLDKRRSVTGYLVKELPGNQEKRS
                     "
     gene            482..1831
                     /locus_tag="VLJ17_13110"
     CDS             482..1831
                     /locus_tag="VLJ17_13110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HSV23956.1"
                     /translation="MNLALYLCLRRAISVALVSAGAFVAFACSAGATTIERVVSPGGI
                     VAWLVREPSVPLIAMDFAFRGGATQDPPDKAGAAAMVAGLLDEGAGDIDSKNFHERAE
                     AKAIEIGFTATRDYMTGSLRTLTENQDEAFDLLRLAITAPRFDAPDVERIREQTLSGV
                     RRATTSPNELASERWWATAFAGHPYAQPPRGTLESVPAITVDDLKNFVRKVFARDALK
                     VGIVGNIDAAAAGKLIDRVFGSLPEKGALSPVANAIPQGLGQKIAIDLDVPQSVLMIG
                     GAGILRKDPDFMAAFVLNHILGGSAFSSRLYREVREARGLAYSVYSAVMPLDYAALFM
                     SGTATRSDRTGQILEIMETEIRKMAETGPTEDELTKAKSFLIGSYALRFDTSTKIAQQ
                     LVQLQLDELGIDYIDKRNSLVDAVTMADVKRVAKRLLDARMLVTVVGKPQPVTAKGG"
     gene            2010..3332
                     /locus_tag="VLJ17_13115"
     CDS             2010..3332
                     /locus_tag="VLJ17_13115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HSV23957.1"
                     /translation="MVLTQSIDAAREASIGREGVSDAELADGLARAGEALGWIRARHA
                     DGKLPLLRLPEQTSDLAAISDAARRITAGATDIVFLGTGGSSLGGQTLVQLAGHAVPG
                     LGLLRDGPRLHFMDNLDADTYAAVLARLPLASTRFVAVSKSGGTGETLMQTAAALSAV
                     QAAGRLGEAPRLFFGITEPTVPGRRNGLRDLLSKHGVVMLDHDPEVGGRYSALTNVGL
                     LPAAIAGLDIAAVRRGAAMALAPILAGAKPAQVPAAVGAALSVVLAAARAKPITVLMA
                     YADRLERFTRWYVQLWAESLGKDRKGTAPIAALGPVDQHSQLQLFIGGPRDKLFTIVT
                     VACGGRGPKIDGALAMVAGEPGFAGKTIGDLVAAQGRATAETLAKNGCPVRTIRLGRL
                     DEESLGELLMHFMLETIVAAHLLGVDPFDQPAVEEGKVLAKHYLTSAL"
     gene            3641..4213
                     /locus_tag="VLJ17_13120"
     CDS             3641..4213
                     /locus_tag="VLJ17_13120"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HSV23958.1"
                     /translation="MERDLGAMRPEYVRQTNDMSDRLSAGSGEVARRVVIEKNLKEYR
                     IPNNLILVLWLAVTMLFIAFSPSLSLAQEAPMEIEGATTLDAKGVIDLILTTPGLVVV
                     DTRTKTDFEGGHIEGAINILDTDITSAGRLAGAVTSKSTPVLFYCNGVKCGRAAKATV
                     KAVEWGYSKVYYYALGINDWKSVQLPLVTR"
     gene            4230..>5245
                     /locus_tag="VLJ17_13125"
     CDS             4230..>5245
                     /locus_tag="VLJ17_13125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012456036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS-domain containing protein"
                     /protein_id="HSV23959.1"
                     /translation="MFTSRHKLLATIIASYAIACLAVSVCLDLVTARYEAAVENAENQ
                     QLDGVLNRQIDDRIWHNHAESVSALARAIAQEPQIRHLIEADDIAALRSALPQMSRRE
                     AVTSGAIALLGVAATRADGTMLTNDGGVPFASPDMDIPKLLSGRSGVDQLKVLTRVWT
                     SEGQPVLTVIHPVGGLRPIGYVVVHASPLKTLSNLDQQMGMAITFWSADRTKELATLS
                     NWKPAAEAQIYRFNINVRSPDGVVIMIADVGRDVTGRVGMMSKIRFWAFTSLVGILAA
                     VAVGSIALILVTTRRMVSEGAYEEFKLAIEGMSHGLCMFDSEQRLIVCNQRYMQMYGL
                     PPELA"
BASE COUNT         1006 a         1537 c         1644 g         1058 t
ORIGIN      
        1 tccttgcgca agtgctaggc ggcggcgaaa ccagccggct atatcgcgcg ctggtggtcg
       61 atcagcacat cgccaatggt gcgggtggct ggtatcaggg gactgcgttg gacgagtccc
      121 gcttaggggt atttgcaaac ccgcaaccgg gcgtcacttt cgcggccatt gaggcggcga
      181 tcgatgccgt tatcgataat attgcggaaa gcggcgttac gccggccgaa ttcgagcgcg
      241 ccaagacgcg cttgattgcg aacgccgtct atgccgagga caatcaagcc tccatggcgc
      301 gctggtatgg ggccgccttg acttccggcg ccagcgtcga acaggtgact tcgtggcccg
      361 cgcgtgtgcg tgccgttacg cccgaagccg tgcaaaacgc tgcgcgcatg tggcttgata
      421 agcgtcgctc ggtgaccggt tatctggtta aggaactgcc gggaaatcag gagaagcgct
      481 cgtgaatctg gctctttatc tttgtctgcg acgcgctatt tctgtcgctc ttgtcagtgc
      541 gggagcattc gtggcgtttg cgtgttccgc cggcgccact acgattgagc gcgtcgtcag
      601 cccgggtgga atcgtcgctt ggctggtgcg tgagccctcg gttccgttga tagcgatgga
      661 tttcgccttc aggggcggcg caactcagga tccacccgat aaagcgggtg ccgccgccat
      721 ggtggcgggg ctgcttgacg aaggcgccgg cgatatcgat tcaaagaact tccacgagcg
      781 cgctgaagcc aaggcgatcg agatcggctt tacggcgacc cgcgactata tgacggggtc
      841 gctgcgcacg ctgaccgaga accaggatga ggcgttcgat ttgctgcggc ttgccatcac
      901 ggcgccgcgt ttcgatgcgc cggacgtcga gcgtattcgc gagcagacac tatccggggt
      961 gcggcgggcg accacgagcc cgaacgaact cgccagtgaa cgctggtggg cgaccgcctt
     1021 cgcgggccat ccctatgcgc agcccccgcg cggcaccttg gaatcggtcc cggccatcac
     1081 ggtggacgat ctgaagaact tcgtgcggaa agtcttcgcc cgcgacgccc ttaaggtcgg
     1141 cattgtcggc aacatcgatg ccgcagccgc cggcaagctg attgaccggg tgttcggcag
     1201 cctgccggag aagggcgcgc tgtcgccggt cgccaatgca atcccgcaag gactggggca
     1261 aaagatcgcc attgatctcg acgtgccgca atcagtgctg atgatcggcg gcgccggtat
     1321 ccttcgcaag gacccggatt tcatggctgc ctttgtgctc aaccatatcc tgggcggcag
     1381 tgcattttcg tcgcgcctct atagggaggt gcgcgaggcg cgcggtcttg cctattcggt
     1441 ctacagcgcc gtgatgccgc tcgactacgc agccctgttt atgagcggca ctgcgacccg
     1501 ctccgatcgc accggccaga tcctggaaat catggagacc gaaatccgca agatggcgga
     1561 aacgggtccg accgaggacg aacttaccaa agccaaatcg tttctgattg ggtcgtatgc
     1621 gctgcgcttc gatacatcga cgaagatcgc gcagcaactg gtgcaactcc agctcgatga
     1681 actcggcatc gactatatcg acaagcgcaa cagcctcgtg gacgcggtta caatggcaga
     1741 cgtcaagcgg gtcgccaagc gcctgctcga cgccaggatg cttgtcactg tggtgggcaa
     1801 gccgcagccg gtgacggcca aaggcggctg aattggggca tcccgccgtc atgccggcgc
     1861 ttgtcgcagg catctacgtt tttctggccg gcccatcggc aagcaaggcg tggatggcac
     1921 cgccggtccg ggtgcgtccc ggccctccgg agaaagttca tcatgaccgc aacgtgctct
     1981 aagttgccgt tgacgcgcat ctatatctta tggtcctgac gcaatcgatc gacgcggcgc
     2041 gcgaagcgag catcggccgc gaaggcgtgt cggacgcgga gcttgcggac ggcttggcgc
     2101 gcgccggtga ggctttgggg tggatcaggg cgcggcatgc cgacggcaag ttacccttgc
     2161 tgcggctgcc cgagcagacg agcgatctcg ccgcgatcag cgatgccgcc cgtcgcatca
     2221 ccgccggcgc gaccgacatc gtgtttctcg gcaccggcgg ctcaagcctc ggcggacaga
     2281 cgctggtgca gctcgccggt catgcggtgc cggggctcgg attgctgcgc gacggcccgc
     2341 ggctgcattt catggacaat ctggatgccg acacgtatgc ggcggtgctg gcgcgtctgc
     2401 cgctcgcgag tacgcgcttt gtcgccgtat cgaaatccgg tggaaccggc gaaaccctga
     2461 tgcagaccgc tgcggcgctg tctgccgtgc aggcggctgg ccgtctcggt gaagcgccac
     2521 ggctgttttt cggcattact gagcccacag ttccggggcg gcgcaatgga ttgcgcgacc
     2581 ttctgtcaaa gcacggcgtt gtgatgcttg accatgatcc cgaggtcggt ggtcgctatt
     2641 cggcgctgac caacgtgggc cttctgccag ccgccatagc cggactcgac attgcggcgg
     2701 tgcgccgcgg cgccgcgatg gcgcttgccc ccatcctggc cggcgccaag cctgcccagg
     2761 tcccggctgc cgttggagcg gcgctgagcg tcgtgctcgc cgccgcccgc gcaaaaccca
     2821 tcacggtgct aatggcctat gcggatcggc tcgagcgctt cacccgctgg tacgtccagc
     2881 tgtgggccga aagccttggc aaggaccgca aaggcacggc gccaatcgca gcgctcggcc
     2941 cggtcgacca gcacagccag cttcagctgt tcatcggcgg tccgcgcgac aagctgttca
     3001 ccatcgttac ggtggcgtgc ggcgggcgcg gtccgaagat cgacggcgcg cttgcgatgg
     3061 tggccggaga gccagggttc gccggcaaga ccatcggcga tctcgttgcc gcacaggggc
     3121 gcgccactgc cgagacgctt gccaaaaatg gctgcccggt acgcacgatc cgcctcggcc
     3181 gtctcgacga ggagagcctt ggcgaactct tgatgcattt catgctggag acgatcgtgg
     3241 cggcgcatct cctcggcgtc gatccgttcg atcagcccgc ggtcgaagag ggcaaggtgc
     3301 tggccaagca ttatttgacg agcgctcttt gaaaatcatt ttcaacaagg ccgagtgatc
     3361 tgccgatagc aaacgtgatg cctgccgcca ttcggtgccc cggctggtct gcaacattcc
     3421 ctacctgaat tcttgaacga cttttccggt cgaaggcgag acagttctgc caaaagccgt
     3481 cggcagcttg tcggtcaatt cggcgtcgca ttcccaaacc agaggctgaa acgtcgtttt
     3541 aagtactttc gtctacggac tgacgatgag ggctatcgcc accgtccttg cccgcattgg
     3601 ggaccgaaat ctcccgcgac gcatagtgtc gaaagtctta atggaaaggg atttgggagc
     3661 catgagacca gaatatgtgc ggcagaccaa tgatatgagc gatcggcttt ccgcgggaag
     3721 tggcgaagtg gcacggcgcg tcgtgattga aaaaaatctc aaggaataca ggataccaaa
     3781 caatcttatt cttgttcttt ggctggcagt tacgatgttg tttatcgcgt tcagtccgtc
     3841 gttgtcgctg gctcaagaag cgccgatgga aatcgaaggc gccaccacgc tcgatgccaa
     3901 aggggttatt gacctcattt taaccacacc aggccttgtc gtcgtcgata cccgcacgaa
     3961 gacggatttc gaaggcgggc atatcgaagg cgcgatcaat attctcgata cggatattac
     4021 gtcggccggc aggcttgccg gtgcggtaac ctcgaaatcc acaccggtgc tcttttattg
     4081 caatggggta aagtgtggcc gcgcagccaa ggcgaccgtc aaggcggtcg agtggggcta
     4141 ttctaaagta tattactacg cgctcggaat taacgactgg aaatcagttc agctcccgct
     4201 ggtaacccga taaatcagcg ggaaccccga tgttcacgtc tcggcataaa ctacttgcca
     4261 ccatcatcgc gtcttatgcc atcgcatgtc ttgcggtgtc ggtatgcctt gatcttgtga
     4321 cagcacggta cgaggccgcc gtcgagaatg cggaaaatca gcagctcgat ggcgtcttga
     4381 accgacagat cgatgaccgc atttggcaca accacgcaga atcagtcagc gcgctggcgc
     4441 gagcgatcgc tcaggaacca cagatcaggc atcttatcga agcggacgac atcgccgcct
     4501 tgcggagcgc tctgccccaa atgagccgcc gcgaggccgt tacttcgggc gcaatagcgc
     4561 ttctcggagt tgccgccaca cgggcggacg ggaccatgct gacaaacgac gggggggtgc
     4621 cgtttgccag ccccgatatg gatatcccga agctgctttc aggtcgcagc ggcgtcgacc
     4681 agctaaaggt tctgacgcgg gtctggacga gtgaaggcca acctgttctt accgtcattc
     4741 atccggtcgg tggcttgcgt cctatcggct atgtggttgt gcacgccagt ccgttgaaga
     4801 ccctctccaa tctcgatcaa caaatgggca tggcaataac cttttggagc gcagatcgga
     4861 ccaaagaact ggcgacgctc agcaattgga aaccggcagc tgaggctcag atttatagat
     4921 ttaatatcaa cgtcaggtcg ccggatggtg tggttattat gattgccgat gtcgggcggg
     4981 atgtaacagg ccgcgttggc atgatgtcga aaatccgatt ttgggcgttc acttctctag
     5041 tcggcattct ggccgctgtc gccgtgggat caatcgccct tatcctggtc acgacgcgac
     5101 ggatggtcag cgaaggagca tacgaagagt tcaagctcgc tatagagggt atgtcccacg
     5161 ggctttgcat gtttgatagc gaacaacgac ttatcgtatg caatcagcgc tatatgcaaa
     5221 tgtatggatt gccccctgag ctggc
//
LOCUS       DATILV010000563         1586 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3204245, whole genome shotgun sequence.
ACCESSION   DATILV010000563 DATILV010000000
VERSION     DATILV010000563.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1586)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1586)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1586
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3204245"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(227..1327)
                     /locus_tag="VLJ17_13130"
     CDS             complement(227..1327)
                     /locus_tag="VLJ17_13130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012043985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HSV23960.1"
                     /translation="MRGEDQRAASFFSYVSLEQRISADHPLRPIRELVDEALGSLSPA
                     FSKLYARDGRPSIPPERLLRALLLQAFYTVRSERLLMQQLDYNLLFRWFVGLSADDPV
                     WDATVFCKNRDRLLDGDIAAKFMTSVLNLPMVRKLLSSDHFSVDGTLIEAWASMKSFV
                     PKDEGGKPPADRGSDCGAGRNAERDFHREKRSNETHASTTDPDARLFRKGAGKEAKLC
                     HMGHLMTENRHNIIVDARLTEANGTAERTTALDMIDDNAHSGSTVGADKNYDTAEFVA
                     GCRERRCVPHVAQNNTNRRSAIDGRTTRHRGYAVSQQKRKRIEEPFGWMKTIGIMRKT
                     RHRGRALVEWFFVLTATAYNLIRIPKILTATL"
BASE COUNT          326 a          454 c          472 g          334 t
ORIGIN      
        1 cagggtttcg aggtggcacc gtgtggccca ggttggccaa actccaatag gctctgactt
       61 cagagggtga gcacagatcc ggcctagcag gccgctgaaa aatcgatttt gaaggtatct
      121 ttttgtgatt tcgtcgatcg cgcaatagag gacgaaggtg ggtgagcgcc tcaagcgctt
      181 gagttttgcg ggctctttgt tcccattttc ggtactctgg gcagactcat agcgttgccg
      241 tgagaatctt ggggatgcgg atgagattat aggcggtcgc ggtgaggacg aaaaaccatt
      301 caaccaaggc gcggccgcga tgacgggtct tgcgcatgat accgatcgtc ttcatccagc
      361 cgaatggctc ctcgatccgc ttacgctttt gctggctcac ggcgtaaccc cgatgacgcg
      421 tggtgcgccc atcaatcgca gagcggcggt tggtgttgtt ctgcgcgaca tgcggcacac
      481 agcgacgttc acggcacccg gcaacgaact cggcggtgtc atagttcttg tcggccccga
      541 ctgtgctgcc cgagtgggca ttgtcatcaa tcatgtcgag ggcagtggtc cgctcggccg
      601 tgccgttggc ttcggtcaga cgcgcatcga cgatgatgtt gtgtcggttc tcggtcatca
      661 gatgtcccat gtggcagagc ttggcctcct taccggcgcc cttgcggaac agccgcgcat
      721 cggggtccgt ggtcgaggca tgggtctcat tcgagcgctt ctcgcggtgg aaatcgcgct
      781 cggcgttgcg tccggcaccg caatccgaac cgcgatctgc cggcggtttg ccgccctcat
      841 ccttgggcac gaagctcttc atgctcgccc acgcctcgat cagcgtgccg tcgaccgaga
      901 agtggtcgct ggagagcagt ttgcgcacca tcggcaggtt cagcacgctg gtcatgaact
      961 tggcggcgat gtcgccgtcg agcaggcgat ctcgattttt gcagaacacg gtcgcatccc
     1021 acaccgggtc gtcagccgac agtccgacaa accaacggaa caacagattg tagtcgagtt
     1081 gctgcatcag aagccgctcg gagcgaaccg tgtagaacgc ctgcagcagc aacgcgcgca
     1141 acaaccgctc cggcgggatc gatggccgtc cgtctcgcgc gtacagctta ctgaacgccg
     1201 gagacagact tcccagcgcc tcgtcgacca actcccggat aggtcgcaaa ggatgatccg
     1261 cagatatccg ttgctccaaa ctcacatagc tgaaaaagct tgccgcccgc tgatcttcgc
     1321 cccgcatctt tctgctcgct cgaccaaaag atccatcatc gaccgaatca cagcgctacg
     1381 gaatcacagc gaaaatgcct cgtaaatcaa ctttttcagc aacctgctag tcttactgaa
     1441 tcacaaacga agggacgaga aggaaagcgg caagcatctg atatgatgag cgattcggat
     1501 ttcagcggag ggctgggatg aagcgtagaa gagagggcgc cgaatcgcga tttacggcct
     1561 ttgtcgaggg attgacgagc gtcatt
//
LOCUS       DATILV010000564         2111 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1669003, whole genome shotgun sequence.
ACCESSION   DATILV010000564 DATILV010000000
VERSION     DATILV010000564.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2111)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2111)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2111
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1669003"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(148..1659)
                     /locus_tag="VLJ17_13135"
     CDS             complement(148..1659)
                     /locus_tag="VLJ17_13135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016846213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV23961.1"
                     /translation="MGVFLSKRELAQTEPAERLDFKSPVPTRMVSNGEFNPLPQTKRQ
                     RQFEERLKDLSEANARKLGMDRRQFLRTSCGMAAAFVALNDVFGPVFDVGSAEAAQPE
                     AAAQRANGLAGQFILDDQVHFVRDDYKVEDILGLARYAGQHWNPSLLKDALGVSLDRY
                     KFENFLKEVYLDSDTKVALLSGAPFDNPAAWFLSNDQIKLANQTVNSIAGSKRLLFHS
                     LFTPAQPGWMEEVDRCIAEVKPNSWKGYTIGDPLQPKTTKYPWRLDDEKLVYPFYEKA
                     VKAGITTVCIHKGLLPKDYETAIPGGAWKYANVDDLPKAAKDWPQINFVIYHSALRAF
                     LEDPDSELAEFEKSGYIRWVSDLAAIPEKSGVRNVYADVGTSFAISAVSNPRFCAAMM
                     GTLVKGLGHDHVFWGTDSVWYGSPQWQIEAFRRLEIPEDMQKKHGFAALGPADGAVKS
                     AIFGYNAARFYKLDLRAELAPMHEDGIAKLKAAYLEDGHAPSNTAYGFVARRA"
BASE COUNT          403 a          613 c          624 g          471 t
ORIGIN      
        1 tgtctcgggc cgctcatgtt ttcctagaga attcgtgggc tggaggcgaa aaggcgcggc
       61 gttcgcggcg gtttgcaggt ggactgggac ctgagaaagg gtgcgtcacc tcagcatatg
      121 ggagggcgat gcgtctcatt cccgggatca ggcgcggcgg gcaacgaagc cataagcagt
      181 gttgctaggc gcgtggccat cctcgagata ggcagctttc agcttggcga tcccgtcctc
      241 atgcatgggt gcgagttcgg cgcgcaggtc cagtttgtaa aatcgcgctg cattgtagcc
      301 aaagatcgcg ctcttgactg cgccatcggc aggtccgaga gctgcgaagc catgtttctt
      361 ctgcatgtcc tctgggatct caagccgacg gaatgcctcg atctgccatt ggggcgagcc
      421 gtaccacacc gagtccgtac cccagaacac gtgatcatgc ccgagcccct tgaccaaggt
      481 ccccatcatc gcagcgcaga agcgcgggtt cgagacggcc gaaatggcaa aggatgtgcc
      541 gacatcggca tagacattgc ggacgccgga tttctccgga atcgcggcga gatcggacac
      601 ccaccggatg taaccgctct tttcaaactc cgcgagctcg ctgtcggggt cttcgaggaa
      661 cgcgcgaagc gcggagtggt agattacgaa attgatctgc ggccagtcct ttgccgcttt
      721 cggcaagtca tccacattgg cgtatttcca tgcgccaccc gggatcgcgg tctcatagtc
      781 ctttggcaat aagcctttat gaatgcaaac ggtggtgatc cccgccttca ccgccttttc
      841 gtagaagggg tacacgagct tctcgtcgtc aagtcgccac gggtatttgg tggtcttggg
      901 ctgcagcggg tcgccgattg tgtagccctt ccagctgttg ggcttcacct cggcgataca
      961 gcggtcgacc tcctccatcc agccgggctg ggccggggtg aacagcgaat ggaacagcag
     1021 gcgcttcgag cccgcaatac tgttgacggt ctggttagca agcttgatct gatcgttcga
     1081 caggaaccat gccgcgggat tgtcgaatgg agcaccgctc aacagggcca cttttgtgtc
     1141 gctgtcgaga tacacctcct taagaaagtt ctcgaacttg tagcgatcaa gcgagacccc
     1201 gagcgcatcc ttcaacagcg acgggttcca gtgctgcccg gcatatctgg cgaggccgag
     1261 gatatcctcg accttgtagt cgtcgcgcac aaaatgaacc tgatcatcga ggatgaactg
     1321 tcccgcaagc ccgtttgcgc gctgggcagc ggcttcgggc tgggcggcct cggcggatcc
     1381 gacatcgaag accggcccaa agacgtcatt tagagcgacg aaggccgctg ccataccgca
     1441 actggtgcgc agaaattgac gacggtccat cccgagcttg cgggcgttgg cctcggaaag
     1501 atctttgagc cgttcctcaa attgtcgctg ccgtttcgtc tgtggcagcg gattgaactc
     1561 gccgttcgac accattcgcg tcggaacggg agatttgaag tccagccttt ccgccggctc
     1621 ggtctgtgcg agctcccgct tgcttagaaa gacacccatg gcttctcctc cctcggctat
     1681 gctttgatgc cgcctcggcg gcagtcgccg ccgttaaaaa atgttcgttc ttgccggatc
     1741 gggaatactc atctcaggca gaaccggcgt caaggcgggc tgccaatgcc atcgctcgta
     1801 tgatggcgat acgtccttac cgtccatatt cagccccgca gttgtgcgcg cattatcacc
     1861 gtttgtcgcg cgatgatcat cgccaaccca ctgcgggtca aggcgatcgc ctagatattt
     1921 atcgcccgtg gatgctgttg ctgtgggcgg tattccgcct ggacgctgcg cgccgccttc
     1981 ggcgatgacg ataggccggg tttccgtctg ggcatttttt cgagaggcct cttgtatcgg
     2041 gcgttttaga tatatctgct atttcgttat gtctaaacac actcggagaa ccaatgcacc
     2101 acggacattc c
//
LOCUS       DATILV010000565         3743 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_131708, whole genome shotgun sequence.
ACCESSION   DATILV010000565 DATILV010000000
VERSION     DATILV010000565.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3743)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3743)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3743
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131708"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            150..416
                     /locus_tag="VLJ17_13140"
     CDS             150..416
                     /locus_tag="VLJ17_13140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23962.1"
                     /translation="MFHPAGSVVVMLCAAVLGSQVLAQPVRTQIPVVTRLVQIYADYE
                     RRLADAIQHRDSGEIDRLVAADFELRTADNIGIAVPRADWIAQS"
     gene            complement(710..1417)
                     /locus_tag="VLJ17_13145"
     CDS             complement(710..1417)
                     /locus_tag="VLJ17_13145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23963.1"
                     /translation="MVKTVADASGTTHFFEVFKEKSVLGTAMVFAPAAVALVETVPMI
                     VYYHGHNSKGSIEGYINSLEQRNFRPLLASKQVLLVEPWGGPKSKFGAMATGDGLSTL
                     IDMAMSVAISYGTPSRPCPVKSPLPPSLILAAFSGGGATLNAVVNSNSSALSRLKEVW
                     AFDSFYSSEGQTWVKWAGDNPDKTLRVRVTTMEDTGSPRRENKIIRATPLKNVDSADP
                     VELGHEACPGAFIPAWI"
     gene            1743..1928
                     /gene="rpmF"
                     /locus_tag="VLJ17_13150"
     CDS             1743..1928
                     /gene="rpmF"
                     /locus_tag="VLJ17_13150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012168841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HSV23964.1"
                     /translation="MAVPKKKTSPSRRGMRRSADALKQPTYVEDKDSGELRRPHHIDL
                     KTGMYRGRQVLKPKTDV"
     gene            1944..2363
                     /locus_tag="VLJ17_13155"
     CDS             1944..2363
                     /locus_tag="VLJ17_13155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23965.1"
                     /translation="MFLLGVPLLMLPFAVYNIFVFLMPGFSWTNEIWHFRMISGGEWG
                     LTPSDMIIAASVGILLIEMLKSARISARNVIDHLLSIVLFVGMLVEFMMVKRIASTTF
                     FLLLVISFVDVVGGFVVRIRAVPHKITTNEAEHLHTA"
     gene            2424..>3743
                     /locus_tag="VLJ17_13160"
     CDS             2424..>3743
                     /locus_tag="VLJ17_13160"
                     /inference="COORDINATES: protein motif:HMM:NF013206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase family protein"
                     /protein_id="HSV23966.1"
                     /translation="MSRDFHSPGRSAVFACNGMAATSHPLASQVAIDILKAGGTAADA
                     AVAAAATLAVVEPHMTGIGGDCFCLVAKPGEPIWGYNGSGRAATAARADMLWDRGVRV
                     IGLDSPHSITVPGAIEAWWAMLWSHGRFSLDRVLAPAIHYAENGFPVAPRVAYDWTFA
                     EQALRADPGASRHFLVNGRAPAAGDVMRFPALAATLKSIAARGPDAFYQEVAAEIVET
                     LAPRGSWLTREDFANHRGEEVIPVSSDYRGLDVVELPPNSQGLTALVLLNILENFDLA
                     SLDPHGPDRLHIALEAARLAFAVRNAHVADPAFMRISVSSLLDKGFARGLADRIDRSR
                     RVNLPASPTPGGDTVYLTVVDRDRMAVSLINSLFSEFGSRIATEKTGIMLHNRGAGFV
                     VDPSHPNAIGPSKRPMHTIIPALGIRDGRCELAFGVMGMHYQPMGHTH"
BASE COUNT          713 a         1128 c         1113 g          789 t
ORIGIN      
        1 cactctgacc aattagagcg gcggcctttg gcgggcacgc ttcgcccagc ctatggcgct
       61 tctatacgac tggcacgcgc tctagctccc aaactttgct acagtccacg gcgtatcgcc
      121 caatcaacgc gtcaccacgg agagcagcga tgtttcatcc ggctggaagc gtagtggtca
      181 tgctgtgcgc agccgtgttg ggatcgcagg tgctggccca gccggtgcgc acccagattc
      241 cggtcgtcac acggctggtg caaatctatg ccgattatga gcggcgcttg gccgacgcca
      301 ttcagcatcg tgattccggg gagatcgacc ggctggtcgc cgccgatttc gaactacgaa
      361 cggccgacaa tataggcatt gcagtcccgc gtgcagattg gattgcgcaa tcgtgaagga
      421 gccagccgca tcgatgtcga tcgggcagat ggcagtccac gattacggcg atatccggat
      481 cgtcagcttc gcgataaagc gcacggaggc gagccgcggt gagcgcggca tcgcagtcgt
      541 cgatgtgtgc tgcagtcagg agaaagttcc gtcctcaaga cacgctatgc aagcatactg
      601 gataatccat ctcggcgcgt gcccggcgaa aagcgtcagc aatcaatcga caaacggtat
      661 tgatttgact tcgtggaaag agactcaccg ccgcatcagt gacgccgaat catatccaag
      721 ccggaataaa ggcgcccgga caagcttcat gtccgagttc gaccggatcg gcggaatcga
      781 catttttaag cggtgtggcc cggatgatct tgttctcccg gcgcggcgag cctgtgtcct
      841 ccattgtcgt gacgcggacg cgcagcgttt tgtcgggatt gtccccggcc catttaaccc
      901 acgtttggcc ctcgctcgaa tagaaggagt cgaaggccca tacttctttc aatcggctta
      961 gagcggatga gttagagttg acaacggcat tgagtgttgc acctccgccg gagaatgccg
     1021 caaggatgag agatggaggc agcggtgact tcaccgggca tgggcggctc ggcgtaccgt
     1081 aggaaatggc aacactcatc gccatgtcga tcagtgtcga caggccatcg ccggtcgcca
     1141 tcgctccgaa ttttgacttg ggtccgcccc aaggctcgac cagcagcacc tgctttgagg
     1201 cgagcagcgg tctgaaattg cgttgctcca atgaattgat gtagccctcg atcgacccct
     1261 tcgagttatg gccatgatag tagacgatca tagggacggt ctcgaccagg gcaacggcgg
     1321 ccggcgcgaa caccatggct gtgccgagaa cgctcttttc cttgaatact tcgaagaaat
     1381 gggtcgttcc gctcgcatca gcaacagttt ttaccatttt tggaagtctc cgttcgcggg
     1441 caagaccatt gccagtgtcg gtgcccgccc tctcggacaa agcactcctc tccgcggctg
     1501 tctcgtcgat accatcgtgg gtcaacagtt ggtcgcatgg ggcgaacaaa ggttcgcgct
     1561 ctggttcaac gatctggagg aggaatagcc ggcaggtcgg gaacagttgg tttgcgtgcc
     1621 gtcttgtcct tcagagctat ggtggggcta gccaccggtc agttcatcca ctataagccc
     1681 tgcttccctt gataactttg atttcggcgt ttgccgccgt ttcagattgt aggagaccgt
     1741 ctatggccgt gccgaagaaa aagacgtcgc cgtcgcgacg tggcatgcgt cgctctgccg
     1801 acgccctgaa gcaaccgacc tatgtggaag acaaggattc gggcgaattg cgccgtcccc
     1861 accacatcga tctcaaaacc ggaatgtatc gcggccgcca ggtccttaag ccgaaaaccg
     1921 acgtataatc aaaggtcggc cccatgttcc tcctgggcgt accgctattg atgctcccgt
     1981 tcgcggtgta caacatcttc gtgttcctga tgcccgggtt ctcatggact aacgagattt
     2041 ggcattttcg catgatctcc gggggcgaat gggggcttac gcctagcgac atgattatag
     2101 cggcctcggt tgggattctt ttgatcgaga tgctcaagtc ggcgcggata agcgcacgca
     2161 acgtcatcga ccatctgctt tcgatcgtcc tgtttgtcgg catgctggtc gagttcatga
     2221 tggtgaagag gatcgcctcg accaccttct tcctgctgct cgtgatcagc ttcgttgacg
     2281 tggtcggcgg gttcgtggtc cgcatccgtg cggttccgca caaaattacc accaacgaag
     2341 ccgagcacct ccataccgcc taaatttagg ccgcgaatag atctgcaacg agtgcgtcgc
     2401 acgcgagcac agcccccaaa catatgtcgc gcgacttcca cagccccggc cgctcggcgg
     2461 tcttcgcttg taacggcatg gcggcgacct cgcatccgct ggcgagccaa gtggccatcg
     2521 acatcctcaa ggcagggggc actgcagcgg atgctgcggt cgcggcggcc gctacgctcg
     2581 cagtcgtcga gccccatatg accggtatcg gaggcgattg cttttgcctg gtggcgaaac
     2641 ccggcgaacc gatctggggc tacaacggct ctggccgcgc cgccaccgcg gcacgcgccg
     2701 acatgctgtg ggatcggggc gtacgtgtta tcgggcttga ttcgccccat agcatcactg
     2761 tgcccggagc catcgaggcg tggtgggcga tgttgtggag ccatggccgt ttcagcctag
     2821 atcgcgtcct cgcccccgcg atccactatg cggagaacgg gtttccggtc gccccgcggg
     2881 tcgcctatga ctggaccttt gcggaacagg cgttgcgcgc cgatccgggc gcatcacgcc
     2941 attttctcgt caacggccgc gcgccggcgg cgggcgatgt catgcggttt ccggcgctgg
     3001 ccgcgacgtt gaaatcaatt gccgcgcggg gaccggatgc cttttatcag gaggtagccg
     3061 ccgagatcgt ggaaacgctg gcgccgcgcg gttcctggct cacccgggag gatttcgcca
     3121 atcaccgcgg cgaggaggtg atcccggttt cgtcagacta tcgtggtctc gatgtggttg
     3181 aactgccacc gaacagccaa gggctcaccg ccttggtatt gctcaacatt ctggagaatt
     3241 ttgatctcgc ctccctcgac ccccacggac cggatcgcct ccacatcgca ctggaagcag
     3301 cccgcttggc cttcgcagtc cgcaatgccc atgtggccga tccggcattc atgcgcattt
     3361 cggtgtcgtc gttactcgat aaaggttttg cacgcgggct tgccgacagg atcgaccgca
     3421 gcaggcgcgt taacctgccg gcctcgccga cgcccggcgg cgatacggtt tatctcacgg
     3481 tggtcgaccg cgaccgtatg gccgtgtcgc tcataaattc cttgttcagc gagttcgggt
     3541 cccggatcgc aaccgaaaag accgggatca tgctacacaa tcgcggcgcg ggcttcgtgg
     3601 tcgaccccag tcatcccaat gcgatcggcc cttccaagcg accaatgcat accatcattc
     3661 cggcgctcgg gatccgggac ggccgttgcg aactggcgtt tggcgtcatg ggcatgcact
     3721 accagcccat gggccacacc cac
//
LOCUS       DATILV010000566         4185 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1669582, whole genome shotgun sequence.
ACCESSION   DATILV010000566 DATILV010000000
VERSION     DATILV010000566.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4185
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1669582"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..288
                     /locus_tag="VLJ17_13165"
     CDS             <1..288
                     /locus_tag="VLJ17_13165"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HSV23967.1"
                     /translation="MCAAYGQASGVPDPINLIEDLGVRGSLIITRPALSHYMSNRSEI
                     DAGAKSLFDAVAQGVVASNVVKTFPLREAAAAHKFIGGRKTTGSIVMLPFE"
     gene            388..765
                     /locus_tag="VLJ17_13170"
     CDS             388..765
                     /locus_tag="VLJ17_13170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HSV23968.1"
                     /translation="MSIIRHEIRQISEENRGQPIISQAVVHGNVAYFAGITPNPIVGD
                     IKTQTAQVLRRVDELLNLARTDKSQLLSAQVWIADMRLFEDHNSVWNEWVDPANPPAR
                     ACLTTDFWRPGMLVEVMVVAAVP"
     gene            complement(1433..1509)
                     /locus_tag="VLJ17_13175"
     tRNA            complement(1433..1509)
                     /locus_tag="VLJ17_13175"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1473..1475),aa:Arg,seq:acg)
     gene            complement(1527..2435)
                     /locus_tag="VLJ17_13180"
     CDS             complement(1527..2435)
                     /locus_tag="VLJ17_13180"
                     /inference="COORDINATES: protein motif:HMM:NF024764.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV23969.1"
                     /translation="MMLWRVTFCVVLIFASLTAWAGVIEDCSQHRDLDLKIKGCTLVI
                     QSGPDDRGFLPAVFTNRGVAYRMKGEYDRAIQDFDRAIQLNPKYAAAFSHRGLAYGRK
                     GDYDRAIQDLDQAIQLDPRDREAFYNRGAAHLVKGDHDDAIKDFDQAIRLDPRDVEAF
                     YYRGLAYGHKGEFDRAMQDFDRAIELDPRYAQAFYDRGVIYARKGQISRAIQDFDKSI
                     ELNPGHVDAFFNRGSIYFRNGDNDRASHDIDQVIRLDQKHAGAIYVRGLMKLKKGDVT
                     GGNADTAAAKAIAPHIVEEAARHGMQ"
     gene            complement(2670..3035)
                     /locus_tag="VLJ17_13185"
     CDS             complement(2670..3035)
                     /locus_tag="VLJ17_13185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23970.1"
                     /translation="MTASAQCLPAQATGNEAFVHDANKQRSVPGSEWSKEPGAQAASR
                     AAKKYLATLDDVAFGAASRVTPKFVSHRSRKPSTTFATKSALSVSGQTAGYLSLARDM
                     DLRTIDPSQDLAAKIPPCE"
     gene            3463..3945
                     /locus_tag="VLJ17_13190"
     CDS             3463..3945
                     /locus_tag="VLJ17_13190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23971.1"
                     /translation="MDQELLLRNEYLAAENQILRGQLKGRPKLSDAERAKLGEIGRRL
                     GRKALGDVATAALPDTILGWYRRLVARKFDGSKHRSPGRPRVERAIEELIVRMAEENR
                     SWGYDRIVGALANLRFEVLRPNGGKCSATPRCVARAGAEAHDHMAGLHSDPPGAVGGD
                     "
     gene            3962..>4185
                     /locus_tag="VLJ17_13195"
     CDS             3962..>4185
                     /locus_tag="VLJ17_13195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23972.1"
                     /translation="MLTLRGLATYYVLFFIHLESRRVDIAGITIHPDELWMKQIARNV
                     TMEGCGVLRDCYSGTKGAVDAITHALAAELG"
BASE COUNT          842 a         1216 c         1245 g          882 t
ORIGIN      
        1 atgtgcgcag cttacggcca ggcgtcaggc gttcctgatc cgatcaacct catcgaagat
       61 ctgggcgttc gcgggtctct cattatcacc cgtcccgcgc tttcgcatta catgtcgaac
      121 cgaagcgaaa tcgacgccgg agcaaaatcc ctgttcgatg ccgtcgcaca gggggtggta
      181 gcgagcaacg ttgtcaaaac ctttccgctt cgggaggctg cagccgccca caagttcatc
      241 ggcggacgca agacaacggg ctcgatcgtc atgcttccat tcgagtaagc ggccccaaaa
      301 aggccggcaa aacgacttcc gccgctttgg tggatgacgt cacggccgcc gcccaagaag
      361 ccactcaatc cacagaaagg aaacatcatg tcgatcatac gacacgaaat tagacagata
      421 tcagaggaga atcgcggtca gccgatcatc agccaggcag tcgttcacgg caacgtcgcc
      481 tatttcgccg gcatcacccc caacccgatt gtcggcgata tcaaaaccca gactgctcaa
      541 gtgctgcgac gcgtcgatga acttctcaac ctcgcgcgaa ccgacaaatc acagctacta
      601 agcgcccagg tctggatcgc tgacatgcgt ctgttcgaag atcacaattc tgtttggaac
      661 gagtgggtcg atccggcaaa ccctccggcg cgggcttgcc tcacgaccga cttttggcga
      721 cctgggatgc tcgttgaagt tatggtggtt gcggccgtgc catgagccaa ttgcagtctg
      781 agaagctgac cagtcagcgc atgtgatgcc gggattggtg cctggatatg cggccggcca
      841 tcgcagcgat gtcgggacag cttgttttct tgccggtgcc gctgcggttg gttcgtcagg
      901 tgccgccgca gcgtcgcgaa gttgtgtcgg aggcggcaac aggggcttgg gggcgagcag
      961 gccctcgact ttacgccgga cgagcaggca agccagccgc cggacatcgc gctcgcttac
     1021 tacactcggc atctgctgca ctgcaccgag gcctcgtagc aaagcgacga taagggtcaa
     1081 actcagaaat gttgacggct tccagggcgt gccggcctgc cgccgctaag ccgacatcat
     1141 ccttgtccgc tgcatccgtg tcggctgccg ctttcgcgtt cgcattcacg tggtgccggc
     1201 gacgaacatc gagcgagaac atgagaatgc ttgtggacgc tggaggccaa tgatcgcgtt
     1261 gcgtccgtca tagcctgcgc gtccaaggcg cagctctcgg gacaacgacg cccgttgagc
     1321 agagcaacga aacctcaaaa tttccccaga ctaaaaccca gactaaacgg aaattttagt
     1381 ctggggtcat ttcggaccag tcttgaaagt gattgtttgg caggaagtta ggtggcgcgc
     1441 ccgaagagat tcgaactcct gacccccaga ttcgtagtct ggtgctctat ccagctgaac
     1501 tacggccgct cgcttctttg cctctcttat tgcatgccgt gacgagcggc ctcctcgaca
     1561 atatgcgggg cgatcgcttt tgctgcggcg gtgtcggcat ttccgccggt tacatcgccc
     1621 ttttttagtt tcatcagacc gcggacatag attgcgccgg cgtgtttttg atcgagccgg
     1681 atcacttggt cgatgtcatg gctcgcgcga tcgttgtcac cgttgcgaaa ataaatgctg
     1741 ccgcggttga agaaggcatc gacatgccct ggattgagct cgatcgactt gtcaaagtcc
     1801 tgaatagcgc ggctgatctg gcctttgcgc gcatagatga cgccgcgatc atagaatgcc
     1861 tgggcatatc gcggatcgag ctcgatcgct ctgtcgaagt cctgcatggc gcggtcgaac
     1921 tcgcctttgt gtccatacgc gaggccgcga tagtagaagg cctcgacatc tcgaggatcg
     1981 agtcggatcg cctggtcgaa atccttgatg gcgtcgtcgt ggtcaccctt gaccagatgc
     2041 gctgcgccgc ggttgtagaa ggcctcacgg tctctgggat cgagttggat ggcctggtcg
     2101 aggtcctgga tcgcccggtc gtaatcgccc tttctgccgt aggcgaggcc gcgatgagag
     2161 aaggccgcgg catatttggg attgagctgg attgccctgt cgaagtcctg gatcgcccgg
     2221 tcatactcgc ctttcatgcg gtatgccacg ccgcggttgg tgaaaaccgc aggaagaaat
     2281 ccccgatcgt ccggaccgga ctgtatgacg agcgtgcagc ccttgatctt cagatcaaga
     2341 tctcggtgct gggaacagtc ttcgatcacg ccggcccatg ccgtaagcga cgcgaaaatc
     2401 aaaacgacgc agaacgttac acgccacaac atcatccttc tccgcgctcg tcccgttctt
     2461 cggatgccag ctgacgaatg actccttttc gaggcttcct ctcgaccgac gcgttagggt
     2521 ttgccgccat ggactttcgc cgggacaaca tgccactgca aataaccggc gcccgcggat
     2581 cgtcagccgt agcagattgc ttccgtgccg acccgacctc ccatcgttgc ggtttctcgg
     2641 aatgccggag tctatttacc aggagaaaat cattcgcagg gaggaatttt cgctgcgagg
     2701 tcctggctgg gatcgatggt gcgcaaatcc atatcgcgcg cgagcgacag gtaaccagcc
     2761 gtctgaccgc ttacgctcag tgccgatttt gttgcaaaag tcgttgatgg cttccgcgaa
     2821 cggtgcgaca cgaacttcgg agtgaccctg ctggctgccc cgaaggccac gtcgtcgagg
     2881 gtggcgagat acttcttcgc ggcccggctc gccgcctgcg cgccaggctc tttgctccac
     2941 tccgatccgg ggactgatcg ctgcttgttg gcgtcgtgaa cgaaagcttc attgccagtt
     3001 gcttgagccg gcaaacattg tgctgaagcc gtcatagggt cgcgctgtgc cgctcttcgc
     3061 tgttcattcc aattctacgc accagcactt tatcgctatg ctcgattgaa cacttgacgc
     3121 gtcgaagtca gatcgcccgt cattcccgcc gactacgaca tgggctcgaa acgacaacga
     3181 ccgaagttcc ccatacgagc tcgaggccac ctgctgtttt gccggagacc accgacaggc
     3241 gtgcgacgac ctgaccgaat gccatccgcc agctgcttcc gtactcgtat ggccaagaaa
     3301 ttaaaattgc aagaaagtgg gcagttatcc caatcggcgt ggtctcgccg cgcgttgtcc
     3361 actacggttt ttggggcgat caatggtgcc gattgcgaac cggcaaacaa ttgggggagg
     3421 ctcatggagt gggcacgtat cctggcctag atcaccggga ccgtggacca ggagctgctg
     3481 ctgcggaatg aatatctcgc cgctgagaac cagattctgc gaggccaatt gaagggtcgg
     3541 ccgaagctct cggacgccga gcgagcgaag ctcggcgaga ttggtcgtcg actgggccgc
     3601 aaggcactcg gcgacgtagc gactgccgct ctgccggata ccattctggg atggtaccga
     3661 aggctcgtcg cgcgcaagtt cgatggctcg aagcatcgaa gcccaggccg accccgggtc
     3721 gagagggcaa ttgaggaact gattgttcgc atggccgaag agaaccgctc ttggggctat
     3781 gaccggattg tgggggcgct ggccaatctg agatttgagg tactccgacc aaacggtggg
     3841 aaatgttctg cgacgccacg gtgtgtcgcc cgcgccggag cggaggcaca cgaccacatg
     3901 gccggccttc attcggaccc acctggcgct gttggcgggg actgattttt tcaccgcgga
     3961 agtgctgacg ctgcgcgggt tggcgaccta ctacgtgctg tttttcatcc atcttgaaag
     4021 ccgccgggtg gatatcgccg gaatcacgat tcacccggat gagttgtgga tgaagcaaat
     4081 cgcccggaac gtgaccatgg agggatgcgg cgtcctacgg gactgttatt ccggcaccaa
     4141 aggggcggtg gatgcaataa cgcatgcgct cgccgcggag ttggg
//
LOCUS       DATILV010000567         1591 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3971392, whole genome shotgun sequence.
ACCESSION   DATILV010000567 DATILV010000000
VERSION     DATILV010000567.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1591)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1591)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1591
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3971392"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..279)
                     /locus_tag="VLJ17_13200"
     CDS             complement(<1..279)
                     /locus_tag="VLJ17_13200"
                     /inference="COORDINATES: protein motif:HMM:NF040320.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HSV23973.1"
                     /translation="MPINEELTIRMDNRPGSLGKVCRALADRGVNILAFQSIPAEKTI
                     LVCMVVDNPAAARAILDKEGISYAAGEVAQVKLPHGPGELAHAASKLGD"
     gene            525..>1591
                     /locus_tag="VLJ17_13205"
     CDS             525..>1591
                     /locus_tag="VLJ17_13205"
                     /inference="COORDINATES: protein motif:HMM:NF013707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HSV23974.1"
                     /translation="MKQTFAIGIGGAAGQGVATPGDIFAKIFSRRGLNLNAYNAYQSI
                     IRGGHTFLTIRTGAEKVTNMGDRIDLFIPLNQDSMDRHLKLLTAGAACIYNADTIKPG
                     AAADGVQLCPLPVSELADITRNKVAQNTLAIGAGLHMMGIGFAALEEVLREQFKKKGD
                     AVVAENIGVARAGYDYAAAHFTAFANPLPKTENKYAILSGNVAMAMGGAAAGVKFYCA
                     YPMSPSTGVLHWMAAHARKAGIMVRQVEDEIGVINMAIGAAQAGVRAMCATSGGGFAL
                     MSEGLGMSAMIETPVVVINCQRAGPSTGVPTKTEQGDLWQMLGAAFGDYPRIIAAPLD
                     IGDCFKLIPEMFNLADRFQCPG"
BASE COUNT          310 a          461 c          491 g          329 t
ORIGIN      
        1 gtcgcccagc ttcgaggcgg cgtgcgccag ttcaccggga ccgtgcggaa gcttgacctg
       61 agcgacttcc cctgctgcgt agcttattcc ttccttgtcc aggattgctc ttgctgccgc
      121 gggattgtcg actaccatgc agacgaggat ggttttctcc gcggggatgg actgaaaagc
      181 caggatgttc acgccgcggt ccgcgagcgc ccggcaaact ttcccgagcg atcccggacg
      241 attgtccatg cgaatggtca attcctcgtt gatgggcatt agagacctcc tgcgttcgca
      301 gcaaatcgaa tggcgtagag gttcgacgtg gttggtgcgg gaatcttacg tctagcccta
      361 ggttgatgca aggaaacatc cggaagaatt gggtgtatac tccggctacc cgaaagacga
      421 acgatttctt cggatgagga gtttctcgac cgggaaacca acaattatct gagtctggcc
      481 tggtgggttc tcgcggcttg gccggctctc atcgtgaggg cgtgatgaag cagacctttg
      541 ctatcggcat cggaggtgcg gctggacagg gtgtagccac cccaggcgac attttcgcga
      601 agatctttag caggcgcggc ctcaacctca acgcctacaa cgcctatcaa tccatcattc
      661 gcgggggcca cacttttctg accattcgta cgggcgcgga aaaggtcacc aacatgggtg
      721 accgcatcga cttgttcatt ccccttaacc aggacagcat ggatcggcac ctgaagctgc
      781 ttactgccgg cgccgcgtgt atttacaatg ccgacacgat taagcccggc gcggccgccg
      841 acggcgtgca gctctgcccg cttcctgttt cagagttggc cgacatcacg cgtaataaag
      901 ttgcgcagaa tacgctcgcg atcggcgccg gtctgcacat gatgggcatt ggcttcgcgg
      961 cattggagga agtcctgcga gagcagttca agaaaaaagg cgatgccgtc gtggccgaaa
     1021 atatcggggt ggcgcgggcc ggctacgact atgccgcggc gcatttcaca gctttcgcga
     1081 atccccttcc caagacggag aacaagtacg cgatcttgag tggcaatgtc gcgatggcca
     1141 tgggaggcgc ggccgcggga gtgaagtttt attgtgccta cccgatgagt ccttcgaccg
     1201 gcgtgctgca ctggatggca gcacacgccc gcaaagcggg catcatggtg cgccaggtgg
     1261 aggacgaaat cggagtgatc aacatggcca tcggcgcggc tcaggccggc gtgcgcgcca
     1321 tgtgtgctac ctccggcggc ggcttcgcgc tgatgagcga gggcctcggc atgtccgcga
     1381 tgatcgaaac tcccgtggtg gtcatcaact gtcagcgcgc gggcccctcc accggcgttc
     1441 ccaccaagac cgagcaggga gacctgtggc agatgcttgg cgccgcattc ggggattatc
     1501 cgcggatcat cgcagcgccg ctggacattg gcgattgttt caagctcatc cccgaaatgt
     1561 tcaacctcgc tgaccgcttc cagtgtcccg g
//
LOCUS       DATILV010000568         1515 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1926649, whole genome shotgun sequence.
ACCESSION   DATILV010000568 DATILV010000000
VERSION     DATILV010000568.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1515)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1515)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1515
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1926649"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(133..>1515)
                     /locus_tag="VLJ17_13210"
     CDS             complement(133..>1515)
                     /locus_tag="VLJ17_13210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015385 - sodium:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006885 - regulation of pH [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter"
                     /protein_id="HSV23975.1"
                     /translation="EFKFNLRPIGLLAFGCVLFTTCAIAAVAHYLLGFDWAVGFLLGA
                     IISPTDIVAPLAIARKLGIPRRLVLILEGEGLANDATALVLYKFAVAAVSTGTFSLGN
                     ASVTFALIVIGETIYGLAVGWVSLRLRQWAREPRVEITLSLMTPYLAFWVPAHLGGSG
                     VLATVACGLYVSWNGPLLIPPATRLQGIFFWDLIVYLIEGLVFLVTGLEARTLLEQTH
                     PFSVSELVIATALTTLIAIFARFVWVFPATYIPRWASAALARRDPSPPWQSPFFLAFT
                     GVRGVDSLAVALAIPYTVLSGAPFPHRDLILFVTFGVIIITLIGQGAMLPYMVRWLGL
                     NSLAQEERENEIRAELEARVSALGEVEKRFDKLVNERELPDDVIELLRTRNQSRSQIL
                     PDNLQDSLEQMRLSASVKKELIDAEREFIYQLLQDGKITDEARRRIEYELDLEEASVA
                     NRAKDSGGWM"
BASE COUNT          336 a          453 c          456 g          270 t
ORIGIN      
        1 ccgtcatgcg cgggcttgac ccgcgcatcc atgatgcggc gcaaatccaa aattctcgca
       61 actggatcac ttgcgatgcc tcatggattg ccgggtcaag cccggcaatg acagtggaga
      121 ggcttttgcg ggtcacatcc agccgccgct gtccttggcg cggttggcaa cgctcgcttc
      181 ctccagatcc agttcgtact cgatacggcg gcgcgcctcg tcggtgatct tgccgtcctg
      241 caagagctga taaatgaatt cgcgttccgc atcgatcagc tcttttttca ctgatgcgct
      301 caggcgcatt tgctccaggc tatcctgcaa attgtcgggt agaatttgcg atcggctctg
      361 attgcgcgtg cgcaagagct cgatgacatc atccggcagt tcgcgctcgt tgaccagttt
      421 atcgaaccgc ttctcgactt ccccaagcgc cgacacgcgc gcctcgagtt cggccctgat
      481 ttcattctcg cgttcctcct gcgcaaggct gttcaacccg agccagcgca ccatgtaagg
      541 cagcatggcg ccttggccga tcagtgtgat gatgatcacg ccgaatgtga caaacaggat
      601 cagatcgcga tgcgggaacg gtgcgccgct caataccgtg taaggaatcg ccagcgcgac
      661 cgcgagtgaa tcaacgccgc gcacgccagt gaaagccaga aagaaaggtg actgccaggg
      721 cggcgatgga tcgcgtctgg caagggcagc gctcgcccag cgcggaatgt atgtggccgg
      781 aaacacccag acaaagcggg cgaaaattgc aatgagcgtc gtcaatgcgg tcgcgatcac
      841 aagctcggag accgagaacg ggtgggtctg ttcgagcagc gtgcgcgcct cgaggccggt
      901 aaccagaaac accaggcctt cgatcaggta cacgatcagg tcccagaaga aaattccttg
      961 cagccgcgtc gccgggggaa tcaaaagcgg cccgttccag ctcacgtaaa gaccgcacgc
     1021 gacggtcgcc aatacgccgg aacctccgag atgcgccggc acccagaagg cgagataagg
     1081 cgtcatcagc gacagggtga tctcaacgcg cggttcacgt gcccactggc gaagacgcag
     1141 gctgacccag ccgaccgcaa gcccgtaaat ggtttcacca atgacgatga gcgcgaaagt
     1201 gacggacgcg ttccccagcg aaaatgttcc ggtgctgacg gcggcgaccg cgaacttgta
     1261 aagcaccagc gctgtggcgt cgttggccag gccttcgccc tcaaggatga ggacgagccg
     1321 gcgtggtatt ccgagctttc gcgcgatggc gagtggcgca acgatgtcgg tcggcgaaat
     1381 aatggcgccg agcaggaatc cgaccgccca gtcaaatccc aacagatagt gcgccactgc
     1441 agcgatggca caggtggtga atagaacgca gccgaacgcg agcaatccga ttggccgcag
     1501 gttgaacttg aactc
//
LOCUS       DATILV010000569         2031 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3972701, whole genome shotgun sequence.
ACCESSION   DATILV010000569 DATILV010000000
VERSION     DATILV010000569.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2031
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3972701"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..817)
                     /locus_tag="VLJ17_13215"
     CDS             complement(<1..817)
                     /locus_tag="VLJ17_13215"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HSV23976.1"
                     /translation="MDRISIVGGQPLYGTIPIAGAKNATLPLMIASLLTPDTLILENV
                     PRLADVSLLQRILNNHGVDVTVNGKRPGDTAYQGQTLHISAAHIVDTTAPYELVSKMR
                     ASFWVIGPLVARMGEARVSMPGGCAIGTRPVDLLILALQSLGAEIEIDRGYVIARARN
                     GLRGGEVVFPKVTVGGTHTALMAASLAHGTTVIENAAREPEVADVADCLNKMGAKISG
                     AGTSRIVVEGVPRLSGARHSVLPDRIETGTYAMAVAMTGGDVMLEGARPELLRA"
     gene            complement(887..1105)
                     /locus_tag="VLJ17_13220"
     CDS             complement(887..1105)
                     /locus_tag="VLJ17_13220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23977.1"
                     /translation="MTNTRSTGRPAGTVSARRNIRTERLAVALKANLRRRKVQARERA
                     AETEEPSRDTDPGGSHDSARVVVDKRSG"
     gene            1358..1432
                     /locus_tag="VLJ17_13225"
     tRNA            1358..1432
                     /locus_tag="VLJ17_13225"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1390..1392,aa:Thr,seq:ggt)
BASE COUNT          357 a          657 c          632 g          385 t
ORIGIN      
        1 ctgcccgtaa gagctccggc cgggcgcctt ccagcatcac gtcgccgccc gtcatcgcca
       61 ccgccattgc ataagtaccg gtctcgatgc gatccgggag cacgctgtgg cgtgcgccgg
      121 acagccgtgg cacgccctcg acgacgatgc gcgaagtgcc ggcaccgctg atcttcgcgc
      181 ccatcttgtt gaggcagtca gcgacgtcgg cgacctcggg ctcacgcgcc gcattctcga
      241 tcactgtggt gccatgggca agcgaggccg ccattagcgc tgtatgggtg ccgccaacag
      301 taaccttggg aaatacgacc tcgccgccgc gcaggccgtt gcgcgcccgc gcgatcacat
      361 agccgcggtc aatttcgatc tcggcgccaa gactttgcaa ggccaggatc agaagatcca
      421 ccgggcgcgt gccaatggcg cagccgcccg gcatcgacac cctggcctca cccatacggg
      481 cgacgagcgg accgattacc caaaaactcg cccgcatctt cgagacaagc tcgtaaggcg
      541 cggtggtatc tacgatatgc gcggccgata tgtgcagggt ctgcccctga taggcagtat
      601 cacccgggcg tttgccgttt accgtgacgt cgacgccgtg gttgttgagg atacgctgaa
      661 ggagcgaaac gtcggcgagg cgcggcacat tctcaaggat cagggtgtcg ggcgtgagca
      721 ggctcgcgat catcagtggc aaggtggcgt tcttggcgcc cgcgatcgga atcgtgccat
      781 aaagcggctg gccgccgaca atgctgatgc gatccatgag aacccatccc ctggtaaaat
      841 agcacgacac cccgcgccgg cggcgccccc caaagccggc tgtggtctag cccgaccgct
      901 tgtcaaccac aactcgggcg gaatcgtggg agccgcccgg gtcggtgtca cggctcggct
      961 cctctgtttc cgcggcgcgc tcgcgtgcct ggaccttgcg gcggcgcaga ttggccttga
     1021 gcgctaccgc gagccgctcc gtacggatgt ttcgccgcgc cgacaccgtc ccggcggggc
     1081 ggccggttga acgcgtattg gtcatggccc ctgataacca ccgccgccgg gcccgcgcaa
     1141 gcggttggtg cgatccgcgc ccgcctgcgg cgcttttttc aaactcaatc atgtcacacg
     1201 atccgggcag aggcacatcg cgtttactcc ccgaattcct tgttggcagc gattcattcg
     1261 acggcgttac atccggcatc cttgcacctc ggcagccctt gtggcaggtt ccgcccgtct
     1321 cgcggccgcc ggtcatttca gcggcggtgc ggtgtttgct gccgtagctc agtggtagag
     1381 cactcccttg gtaagggaga ggtcgacagt tcaatcctgt ccggcagcac caggaaagcc
     1441 cagataaatc gagacttcct agctaggcaa ctcccttttc ccccagcctt cggccgtgaa
     1501 cggagggtga atttccccca atagctggga gaaaattagg ggaaagcgtt cgctaggcgt
     1561 tccggatgga gaacggtcgg cgccggtatc agttcatcag ttccacatgc aattttatgt
     1621 tatgtcgatg gggggggcgg tgccgtaagc gacgcacgac gcagagccgc cgggcgggcg
     1681 cacttgatac cctcgttccc tttttggtgt gctgagttcc ttgcgggtgc gccgcgtggc
     1741 acacgtctgc agaactccag actacgaatc tgggggtcgg aggttcgaat ccttccgggc
     1801 gcgccaaatt taaccggtcc cgacctcaag gccgctctca ccgagcggcc ttatggcttt
     1861 tgtagccagc gacagcatgc ccgtcagatg gccgtgcagg tccccggaca gcgtttgcgg
     1921 ctgtgatcaa tgcggctttt tcgcctcgcg gaaacgctcc caacgatcaa ctggctccag
     1981 gcggtcggcc ccctggaatg gcagcaccca ccctggatac tcagggggaa g
//
LOCUS       DATILV010000570         2107 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1415354, whole genome shotgun sequence.
ACCESSION   DATILV010000570 DATILV010000000
VERSION     DATILV010000570.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2107
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1415354"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            160..1194
                     /locus_tag="VLJ17_13230"
     CDS             160..1194
                     /locus_tag="VLJ17_13230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011238416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HSV23978.1"
                     /translation="MKRDGRTLDHATLETIRLMAVERVREGEVASAVITSYGFNRTTI
                     YKWLTAAAKPGVGLRALQARPAPGRPRRLTPGQEQQVFRWINGKDPRQYGLDFGLWTR
                     SVVAGLIARKFGITLGLTAVGELLAKLNLTPQKPLQRAYQRDPEAIERWRRETYPTIA
                     QQAKVEGGEVFFWDESGFRADAVHGRTWGVKGHTPVVDRPGQRQSISAASAVNAKGGF
                     WYCTYQGGLTAELFVGLLRKMMRHRAKPVHLVVDGLPAHKTKLVKDYVLSAKGRLTLH
                     FLPGYAPELNPDELVWSYVKRTGVARTPLHKGERLKDKVEAQLASIKNAPRLVRSFFR
                     APTVAYITDW"
     gene            1191..>2107
                     /locus_tag="VLJ17_13235"
     CDS             1191..>2107
                     /locus_tag="VLJ17_13235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23979.1"
                     /translation="MSKNLPQARAIGLVDTDGWLANGSRLWPVPRVDLSDRDYYKHFR
                     EHDDPGLFISSPGRDLISGRWTFFLARRANGPDGAFAGIVLGLFDAQYLQDFYRAISS
                     TDETIALFRRDGTLLTRHPHLKAMITTEIPPASPWHASVAKGGGTFRTPGFFSETPMI
                     ISARPVNEYPLVINVGFAESAAFAGWRREAALIALAALCASIGIATLFAALASRSRKL
                     EQQTAELRQVALALGDSEARFRDFATMTSDWLWETDREHRFTYVSDGIRRFGQNPDTS
                     IGHTRFEMIADTDHEPEKWVEHRAVLERH"
BASE COUNT          405 a          623 c          692 g          387 t
ORIGIN      
        1 ttcaggcagg atgcgggcag gaattgggaa gacgtgctga atcgaatagt cggtgagatt
       61 gcctcaattc aaggtgccgc ggtagggtat tactcaccag tcggcaagtt aggcgacaaa
      121 ctttgttgac aactctgctg aggcacgatt caaggtggca tgaagcgaga tggacgaacg
      181 cttgaccatg cgacgctgga gaccatccgg ttgatggcgg ttgagcgggt gcgggaaggc
      241 gaggtcgcct cagcggtgat cacctcctac ggcttcaacc gcacaaccat ctataagtgg
      301 ctcacagcgg cggccaaacc cggtgtcgga ctgcgcgcgc tgcaagcccg gccggcccct
      361 gggcggcccc gccgcctgac accggggcag gaacaacaag tgttccgctg gatcaacggc
      421 aaggacccgc gccaatacgg actggacttc ggcctgtgga cgcgatcagt ggtggcgggc
      481 ctgatcgcac gaaagttcgg catcacattg ggccttacgg cggttggtga actgctcgcc
      541 aagctcaacc tgacaccaca gaagccgctg caacgggcat atcagcgcga tccggaggcg
      601 atcgagcggt ggcggcgcga gacctatcca accattgcac agcaagccaa ggtggaaggt
      661 ggcgaggtct tcttctggga tgagtcgggg tttcgcgccg atgccgttca cgggcggacc
      721 tggggtgtca agggacacac gccggtcgtg gaccgtcctg gtcagcggca atcaatcagt
      781 gccgcctctg cggtgaacgc caagggcggg ttctggtatt gtacctatca aggtgggctg
      841 acggccgagt tgtttgtcgg gttactgcgg aagatgatgc ggcatcgcgc caagccggtg
      901 catttggtgg ttgatgggct tcccgcacac aagacgaagc tggtgaagga ctacgtgcta
      961 tcggccaagg gcaggctcac gctgcatttc cttccgggat atgcgccgga actgaacccc
     1021 gacgagcttg tatggagcta tgtgaagcgc actggcgtgg ccagaacgcc gctgcacaag
     1081 ggcgaacggt taaaggacaa ggtcgaggcg cagttggcca gcatcaagaa cgcgccccga
     1141 cttgtccggt cattcttccg agcaccaact gtcgcctata ttaccgactg gtgagtaaga
     1201 acctgccgca ggcccgggca atcgggctgg tggatacgga tggctggctg gcgaatggct
     1261 cgcgactctg gccggttccg cgggtcgacc tgtcggaccg cgactactac aagcatttcc
     1321 gcgagcacga cgatccaggt ctgtttatta gctcgccggg tcgcgatctg atctccgggc
     1381 ggtggacctt ctttctcgcg cgccgcgcca acggccccga cggcgcattc gccggcatcg
     1441 tgttggggtt gttcgacgca cagtatttgc aagacttcta ccgcgcgatc agcagcaccg
     1501 acgaaacgat cgccctgttt cgccgcgacg ggacattgct gacgcggcac ccgcacctca
     1561 aggcgatgat caccacggaa atcccgcccg cttcgccgtg gcatgcgtcg gtcgcgaagg
     1621 gcggcggaac ctttcgcacg cccggcttct tcagcgagac gccgatgatc atctcggcgc
     1681 ggccggtcaa cgaatatccg ctcgtcatca atgtcgggtt tgccgagagc gccgcctttg
     1741 ctgggtggcg ccgcgaggct gccctgattg cgctggcggc gctgtgcgcc tcgatcggca
     1801 ttgccacgct gttcgcggcg ctcgcatcac gctcacgcaa actggagcag caaaccgccg
     1861 agctgcggca ggtcgcgctg gcgctgggcg atagcgaggc ccgcttccgc gatttcgcga
     1921 cgatgacatc ggattggctg tgggaaaccg atcgcgagca tcggtttacc tacgtatcgg
     1981 acggcatccg gcgcttcggg caaaatccag atacctcgat cgggcatacc cgcttcgaga
     2041 tgatcgccga taccgaccac gagccggaga aatgggtcga gcatcgggcg gttctggagc
     2101 ggcacga
//
LOCUS       DATILV010000571         1846 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2694106, whole genome shotgun sequence.
ACCESSION   DATILV010000571 DATILV010000000
VERSION     DATILV010000571.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1846)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1846)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1846
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2694106"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..376
                     /locus_tag="VLJ17_13240"
     CDS             <1..376
                     /locus_tag="VLJ17_13240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020173606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="methionine biosynthesis protein MetW"
                     /protein_id="HSV23980.1"
                     /translation="FESGSFDYVILSQTLQAVRHTEQIIGDMLRVGRQAIVTFPNFGY
                     WAHRLQVLTGRMPVSPTLPYQWYDTPNVHLFTLRDFESFCADHGIRILERVVMDRGRV
                     VSVLPNLLGSLAVYRFDRGAQP"
     gene            442..1671
                     /locus_tag="VLJ17_13245"
     CDS             442..1671
                     /locus_tag="VLJ17_13245"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AmpG family muropeptide MFS transporter"
                     /protein_id="HSV23981.1"
                     /translation="MREVLFTRRMLICVFAGFSSGLPLYVLLTLVPGWLRSEHVDLKA
                     IGLFTLIQIPYTWKFLWSPLLDRFGFPWLGRRRGWMLITQCALLLAIAVLGGMVPATD
                     MRAIAALAAMTAFLSASQDIVIDAYRREILSDAELGLGTAVYVNAYKVAGLIPGSLSL
                     VLADYYPWPIVFIITALFMFAGIGMTLLVAEPAIAPGAPRTLRAAVIEPFVEFIGRTG
                     WRDAVLVLAFIFLYKLGDSMATALATPFYLDMGFSKSQIGLIAKNAGLWPSVLGGLVG
                     GLWMVKLGINRALWIFGAAQALSILGFALLSQLPGDRIALACAIGFEALGVGLGTAAF
                     TAFIARTTNPRYTATQFALFTSLAAVPRTLINATTGWIVEQTGWLHFYLLCTLLAVPG
                     MVLLWWVAPWNGRGRDS"
BASE COUNT          296 a          554 c          574 g          422 t
ORIGIN      
        1 gttcgagtcc gggtccttcg actacgtgat cctgtctcag acactgcagg cggtacggca
       61 cacggagcag attatcgggg acatgttgcg tgtgggccgg caagcgatcg tcacatttcc
      121 gaacttcggt tactgggcgc acagattgca ggtgctcacc ggccgtatgc cggtgtcgcc
      181 gaccctaccc taccagtggt acgacacgcc gaatgtgcat cttttcacgc tgcgcgattt
      241 cgagagcttc tgcgccgacc acgggatccg catcctggag cgcgtggtga tggaccgcgg
      301 tcgcgtcgtg tcggttctgc ccaatctgct cggctcgctt gcggtatatc ggttcgatcg
      361 gggcgcgcaa ccatagccac gactccacgc gcgcttgggg cgcaccctca agatgtgacg
      421 ccagccgaca ggccggcgtc cgtgagggaa gtcctattca cgcggcgcat gctgatctgc
      481 gtttttgccg gcttcagctc tggattgccg ctttacgtcc tcctgacgct tgttcccggc
      541 tggcttcgct ccgaacacgt ggatctgaag gccatcggcc tgttcacctt gatccagatt
      601 ccctacacct ggaagtttct ctggtcgccc ttgcttgatc ggtttggctt cccgtggctg
      661 ggccggcgac gtggctggat gctgatcacc caatgcgcct tgctgctggc catcgcagtg
      721 ctcggtggta tggttccagc gacggacatg cgagcgatcg ccgcattggc agcaatgacg
      781 gcgttcctga gcgccagtca ggacatcgtg atcgacgctt atcgccgcga aattctgagc
      841 gatgcggagc taggtctcgg caccgcggtg tatgtcaatg cttacaaagt cgcagggttg
      901 atccccggct cgctgtcgct tgtgttggct gactactatc cgtggccgat cgtcttcatc
      961 atcaccgcgt tgttcatgtt tgcggggata ggtatgacgt tactcgtcgc ggaaccggcc
     1021 attgctcccg gcgcgccgcg cacccttcgg gcggccgtga tcgaaccctt cgtggaattc
     1081 atcggccgca ccggttggcg cgacgccgtg ctcgtgctgg cattcatctt cctctacaag
     1141 ctcggtgaca gcatggccac tgcgcttgca acccctttct atctcgacat ggggttcagc
     1201 aagtcccaga tcgggcttat cgcgaagaac gccgggctat ggccgagcgt attgggcggt
     1261 ttagtaggcg gcctgtggat ggtcaagcta ggaatcaacc gggcgctgtg gatattcggc
     1321 gcggcgcagg ctttgtcgat actgggtttc gcgcttctgt cccagctccc gggcgaccgc
     1381 atcgcgctgg cttgcgcgat cggcttcgaa gccttgggtg tgggactggg gacggcggcg
     1441 ttcacggctt tcatcgcacg tacaaccaat ccgcgctata cagctacgca attcgcgttg
     1501 ttcacgagcc tagcggcggt cccgcgcacg ctgatcaacg ccactacggg ctggatcgtg
     1561 gagcaaacgg gatggcttca cttctacctc ctttgcactt tgctggcagt gccaggcatg
     1621 gtcctgctct ggtgggtggc gccgtggaac gggaggggcc gtgattcgtg acccgtcaga
     1681 aagcgatttg tgttccgcac gcgcatctcc gccgcgaggg atgcgcgagg cccgggcaga
     1741 accaagagat cacgaatcac ggcatctcgt agtcatagtc gattacgaga ggtgcgtgat
     1801 cgctgaaccg cctcgatttg tagatcgagg ccttgaccgc ttttgc
//
LOCUS       DATILV010000572         4690 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4736525, whole genome shotgun sequence.
ACCESSION   DATILV010000572 DATILV010000000
VERSION     DATILV010000572.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4690)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4690)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4690
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4736525"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..791
                     /locus_tag="VLJ17_13250"
     CDS             <1..791
                     /locus_tag="VLJ17_13250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007610012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TrkA C-terminal domain-containing protein"
                     /protein_id="HSV23982.1"
                     /translation="GDVVEVFVTARELHGRTLNEIVNRFGDVQGVFLRTLMRRGQEVP
                     VTPETRIYVGDVMTLIGLNQHLNRVVPRVGQPFRSSDRTDIAFLASGIAIGLLVGLLS
                     LTIGSIPLTLGGGGGALVAGLVCGWLRSRRPTMGAFPPAAQQSLADLGLGGFVAAIGL
                     ANGPAALAAIQAHGLMLLGVGIVVTLAPMIVGTLFAHRVLHMNPVIVCGALAGAMTVD
                     AAVAGSCEVAESQTPVLGVAVPYAIANVFLTVLGPIIVGLTFVG"
     gene            1104..2528
                     /locus_tag="VLJ17_13255"
     CDS             1104..2528
                     /locus_tag="VLJ17_13255"
                     /inference="COORDINATES: protein motif:HMM:NF015532.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OprD family outer membrane porin"
                     /protein_id="HSV23983.1"
                     /translation="MSKVARGVIAGAWIGAWIGACSGWLGATAPSWAQTSTNSQLALP
                     SHDDIAEEERQSWTLKKLPPQPYMNEIYWQYPSDTPAFFRDSLLQLVTRTYYFTRDNF
                     DGSRSQALTTGGWIAFRSGLIGDVFGVHAAYYTSLPLFAPADEGGSRLLTPDQNSLGM
                     LGQLYGRVQIFDQEIRGGRQLVDTPLINPQDNRMVPNTFTGATLVTLPDKDRSYDYAL
                     GYLWDVKQRDSNDFISMSDALASADVENRGAPFAMLKYRPFSGLSTVIMDYYVQDFVN
                     TGFAQVEYNFQQPKQVPNWIIGANLIDQRSVGNDLLTGSSFSTYQASAKVQMNYAGWT
                     LFVAGSSTGDQSKIFSPFGSKPNYTDMQQVSFDNANEKAFGGSAAYDFGYAFGKYGLS
                     GLSAGVWYTQGWDAIDPTTNLGIPNRSELDLWVQYRPTEGPLKGFRLKTQYSDVWQQG
                     NVRSVQPEFRFIIDYTVLFRPPLS"
     gene            complement(2820..3734)
                     /locus_tag="VLJ17_13260"
     CDS             complement(2820..3734)
                     /locus_tag="VLJ17_13260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23984.1"
                     /translation="MRSVFLITMRTFSYLGIIACLASGSAWPQNAAVAPSSPPDDGTV
                     TNGIYTSKYFDLAYPLPSGWKEAMDGPPPSYAGYYVLRTLAPVGEHTGTILIAAQDMF
                     FGAAAFQDATAMARKIGRAMSEIDSMTIDRPPSEITIAGRPFSRVDFSGVGLFRSTLI
                     TQIRCHLVSFNLTANNPDLLAALVHSFDNLGHSRDRGAGDVDPVCIKTRAPLEHLLTK
                     VDPSANASHTPIPVRIIIDAGGSVKHVHVIRATTAQRSAVETALSQWKFKPPEVDGRV
                     VDLETGLLVEFTPAGTVKYLASDLAQPY"
     gene            complement(3901..>4690)
                     /locus_tag="VLJ17_13265"
     CDS             complement(3901..>4690)
                     /locus_tag="VLJ17_13265"
                     /inference="COORDINATES: protein motif:HMM:NF018269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="di-heme oxidoredictase family protein"
                     /protein_id="HSV23985.1"
                     /translation="VFGAGLVEAVPDDALVNALAQSSFQKSQLGVSGRFNHNGNDGTI
                     ARFGWKAQNKSMLLFAGEAYNVEQGVTNELFPNEREGDPNCQFNATPEDHTHFRVTTP
                     GPSPATDFSGDVVSFAGFMRFLAPPTPAPTTPTTTRGLQAFLNIGCQACHTVAQTTTK
                     SPYTGQSNVTFQPYSDFAVHDMGDGLADGVSQGNANGDEFRTAPLWGVGQRIFFLHDG
                     RTDDLLQAIRAHSGRTSEANQVISNFNLLSPQDQQALLVFLRSL"
BASE COUNT          925 a         1359 c         1417 g          989 t
ORIGIN      
        1 ccggcgacgt cgtcgaagtg ttcgtaaccg cccgtgagct gcacgggcgg acgttgaatg
       61 agattgtcaa ccgattcggc gatgtacagg gcgtgttctt gcgtacattg atgcgccggg
      121 gtcaggaagt accggtgacg cccgaaacga gaatttatgt gggcgacgtc atgacgttaa
      181 ttggccttaa ccagcatctc aaccgcgtcg tgccgcgggt tggacagcca ttccgctcca
      241 gcgaccgtac cgacattgca tttcttgcaa gcggtattgc gatcggcctg ctggtcggtt
      301 tgctcagtct cacgataggc tcaattccgc ttacgctcgg tgggggcggc ggcgcgctcg
      361 ttgccggtct ggtctgcggc tggctacgct cgcgtcggcc tacgatggga gcgtttccgc
      421 cggcggcgca gcaatctctt gccgacttgg gacttggggg attcgttgcc gccatcggtc
      481 tggcaaatgg accggctgcg ttggcagcga tccaggccca tgggctcatg ctactgggtg
      541 taggcatcgt ggtgacgttg gcacccatga ttgtcggcac tctgtttgcg catcgcgtgc
      601 tgcacatgaa cccggtgatc gtgtgcggcg ctttggccgg cgcaatgacg gtcgacgccg
      661 cggtagccgg ctcttgcgaa gtggccgaga gtcagacccc ggtgctcggc gtggccgtgc
      721 catatgccat cgccaacgtc tttttgacgg tgctcgggcc gatcatcgtc gggctcactt
      781 ttgtcggttg aatctgtgaa aacttgccat tgaagcggcc ccaccgacca ccataaaact
      841 ttgcggcagc gcaacgctca aattcatcga tcattatttg cacacaatcc tgccatcgcg
      901 tccgcaatat gcacaacgcc aaaagagtgc aaaaatatca cagtcctgag aaatcagacc
      961 gggctgcgaa gcgctcaagt atgcaatttg agtgcacaag gtaaaatcag acgagtcgta
     1021 tcctgccgac cttttggccg gcaaggagcg gatgccatga tggcaaatta gcggtgtgcc
     1081 gcaagcattc cggggggggg cgtatgagca aagtcgcaag aggtgtcatc gctggcgctt
     1141 ggattggcgc ttggattggc gcttgctcgg gctggctcgg tgcaaccgct ccatcctggg
     1201 cgcaaacatc gaccaattcg caacttgcgc tgccatcgca cgatgacatc gcggaggagg
     1261 agcggcaaag ctggactctc aaaaagctgc caccccagcc gtacatgaac gaaatctatt
     1321 ggcagtatcc tagcgataca cccgcgttct tccgcgattc cctgctgcag ctcgtaaccc
     1381 gcacatacta tttcacgcgc gacaattttg atggatcgag gtcacaggct ttgacaacgg
     1441 gaggctggat cgcctttcga tcgggtctta tcggtgacgt gtttggcgtg cacgccgcct
     1501 actatacttc gctgccgctt ttcgcgccgg cggatgaagg tggctcgagg ctgctgaccc
     1561 cggaccaaaa ctcgctcggc atgcttggcc agctctatgg gcgcgtgcag atttttgatc
     1621 aggaaattcg tggtggtcgc cagctggtgg acacgcctct tatcaatccg caagacaatc
     1681 gcatggtgcc aaatacgttt acaggcgcca ctctggtcac acttccggac aaggatcgaa
     1741 gctacgacta cgcgctcggt tatctctggg atgtaaagca gcgggattcg aacgacttca
     1801 tttcgatgtc ggacgcgctg gcgagcgcgg atgtcgagaa ccgtggagcg ccgttcgcga
     1861 tgctcaagta tcggccgttt tcagggcttt cgaccgtaat catggactat tacgtccaag
     1921 acttcgtcaa tacgggattt gctcaagtcg agtacaattt tcagcagccg aagcaagttc
     1981 caaattggat catcggcgcg aacctcatcg atcaacgcag tgtcggaaac gacttgctca
     2041 ctggaagctc gtttagcacc tatcaggcct ctgccaaagt gcagatgaac tatgcgggat
     2101 ggactttgtt cgtcgcgggt tcgagtaccg gcgatcaatc caagatcttc tcgccgttcg
     2161 gctccaagcc aaactacacc gatatgcagc aggtatcgtt cgataacgct aatgaaaagg
     2221 ctttcggtgg tagcgcagcc tacgatttcg gctatgcatt cggcaagtat ggcctctccg
     2281 ggcttagcgc aggggtttgg tatacgcagg gctgggacgc catcgaccct actaccaacc
     2341 tcggaatacc caatcggagt gagcttgacc tttgggtcca ataccgtccc accgaagggc
     2401 cactgaaggg ttttcgcctg aagacgcaat attcggatgt ctggcagcaa ggtaatgtcc
     2461 gcagcgtcca accggaattt cgattcatca tcgactacac cgtgctgttc cgtcccccgc
     2521 tgagctagcg tggattcggg aaagcagccc tggatgcgct ccagacaatc gcggcaccgt
     2581 gaggctggag ggtggcgctg cgcaatgcca ttgcttgctt acaatcgctc tggcgaccac
     2641 cctcgtgtgg cccataaggc gggctcgcgc ccggaaacgc agcccgacct ttcgggggct
     2701 gccgcagccg ccaagccacc atgatgtcgg aggatctggt gctacgcttt tggccctacc
     2761 ggcgggtgtt tcgcggaggc ggtacttccg aggccggaac atctgcccca taaggaggat
     2821 cagtacggct gtgccagatc gctggccaaa tacttgacgg ttcccgcagg cgtgaactcg
     2881 acaaggaggc cagtctccag gtcgaccacg cgaccatcca cctcgggggg cttgaatttc
     2941 cattggctca acgcggtttc aacggcgctc ctttgagcgg tggtggcgcg aatgacgtgc
     3001 acgtgtttga cgctgccgcc agcgtcgatg atgatccgga ctgggatcgg cgtgtgagaa
     3061 gcgtttgccg acggatcgac tttcgtcagc agatgttcga gcggtgcccg ggtctttatg
     3121 cacaccggat caacgtctcc ggcgccgcgg tcgcgactgt ggccaagatt atcgaagctg
     3181 tgcacaaggg ctgccagcag gtcgggatta ttggccgtca gattgaagct cacgagatga
     3241 cagcggatct gggtgatcaa cgtgctgcga aagagtccga cgccactaaa atcgactcga
     3301 ctgaacggac ggcccgcaat cgttatctcc gacggcggcc ggtcgatcgt catgctgtcg
     3361 atttccgaca tggcccggcc gattttgcgg gccattgcgg ttgcgtcctg gaacgccgca
     3421 gcgccaaaaa acatatcttg tgcggcgatc agtatagttc ctgtgtgctc gcctaccggt
     3481 gccagcgtgc gaagtacata atagcccgcg tacgagggag gcggtccgtc cattgcctcc
     3541 ttccaccccg atggcagcgg ataggccaag tcgaaatatt tgctggtgta gattccgttc
     3601 gtgacggttc cgtcgtcggg aggtgacgac ggcgccactg cggcgttctg cggccacgcc
     3661 gagccgctcg ccagacaagc gataatgcca agataagaaa acgtccgcat cgtgatgagg
     3721 aatactgacc gcacgtgccc tcccgacgat cgccgccaga cgcgccatcg caatgacgcg
     3781 atcgcaactg gcgtgcaaac gcacctggcg cgttgcctca catccgcgct gaatgaaatc
     3841 caaaccgttc tatggatgcg cgggcgtggg ccgcccgcgc attggcgatc gaaagtccct
     3901 ttagagcgat cgcaggaata ccagcagagc ctgctggtcc tgtggcgaca acagattgaa
     3961 gttgctgatc acctggttcg cttctgatgt cctgccggaa tgcgcacgaa ttgcttgtag
     4021 aaggtcgtcc gtgcggccgt catgcaggaa gaaaatgcgc tgcccgacgc cccacaaggg
     4081 tgccgtgcgg aactcgtcgc cattggcgtt gccttgtgaa acgccgtcgg ccaacccatc
     4141 tcccatgtcg tggacagcga aatcgctgta cggctggaaa gtgacattgc tctgcccggt
     4201 gtagggcgac ttggtcgtgg tctgcgcaac cgtgtgacag gcctgacacc cgatgttcag
     4261 gaaggcctgc agcccgcgcg tcgtggtcgg ggtggtcggc gccggggtcg gcggagccaa
     4321 gaagcgcatg aagcccgcaa agctgactac gtcacccgaa aaatccgtcg ccgggctcgg
     4381 acctggcgtc gtcacccgga aatgggtgtg gtcttcgggc gtcgcattga actggcagtt
     4441 cggatcgccc tcacgttcat tgggaaaaag ttcgttggtc accccctgct cgacgttgta
     4501 ggcctcgccg gcgaacagca gcatcgactt gttctgcgcc ttccagccga accgggcgat
     4561 cgtgccgtcg ttgccgttgt ggttgaagcg ccccgacacg ccgagctgcg atttctggaa
     4621 gctcgactgc gcgagcgcgt tcaccagcgc gtcgtccgga accgcctcga ccaggccggc
     4681 gccgaacacc
//
LOCUS       DATILV010000573         1705 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_390441, whole genome shotgun sequence.
ACCESSION   DATILV010000573 DATILV010000000
VERSION     DATILV010000573.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1705)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1705)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1705
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_390441"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            235..1356
                     /locus_tag="VLJ17_13270"
     CDS             235..1356
                     /locus_tag="VLJ17_13270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011239024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HSV23986.1"
                     /translation="MNVRYRVELSQAERCELTAMLSKGKRAARKLKRAQILLAADAGH
                     SDEEIARTVAVGGSTVYRTKRRFVEGNLERALSEDPRPGAERKLTGKEEALLVATACA
                     NPPEGRARWTLELLADAMVKLTGHESLSGETVRRRLAENGLKPWRKDMWCIPRVDGEY
                     VARMEDVLDLYAEAPDPRRPVVCFDESPVQLIGEVRQPIPAEPGQIERYDYEYRRNGT
                     VNLFVCIDVHRPWRKVKVTERRAAEDYAHCMRELVDVHYPDAACIRVVQDNLSTHSAG
                     ALYEAFPPAEARRILQRLEFHYTPKHASWLNMVEIEIGVLRGQCLDRRIDDPKRLISE
                     IAAWEKQRNTAGARIKWMFTTEKARAKMGRAYPVTSKES"
BASE COUNT          356 a          515 c          524 g          310 t
ORIGIN      
        1 gccggtgttt tgacttggta gtgggaatcc gatgacatca acatgcacct ttgcctgtcg
       61 ctgtcgcaaa cctattgatt ggcggttggg cgtcggaaca tgtgcgagtg ggtatagatg
      121 aaagccaggt actggccttg cttttcggtg aagccttgag cgctgaggct gcgggcggtg
      181 cctgattttt gattcatttg tcgattcgtc cggccctcca acaaggaggt cgggatgaat
      241 gtacgttatc gggtcgaatt gagccaagcc gaacgctgtg aactcaccgc gatgttgagc
      301 aaaggcaaac gagccgcccg caaactcaag cgcgcccaga tcttgctggc ggccgatgcc
      361 ggccacagcg atgaagagat tgcgcgtacg gtggcggtgg gcggttccac cgtgtaccgg
      421 actaaacgcc gcttcgtgga aggcaatctg gaacgggcac tgagcgagga tccgcgtcct
      481 ggggcggagc gcaagctcac cggcaaggaa gaagccttgc tggtggcaac ggcttgcgca
      541 aaccctcccg agggtcgcgc ccgctggacg cttgaactgc tggccgacgc catggtcaag
      601 ctcaccgggc atgagagtct gtcgggcgag acggtgcgcc ggcggctggc cgaaaacggt
      661 ctcaagccct ggcgcaagga tatgtggtgc attcctcggg tcgacggcga atatgttgcc
      721 cgcatggaag acgtgctcga cctctatgcc gaagcgcccg atccaaggcg gccggtggtc
      781 tgcttcgacg agagcccggt ccagctgatc ggcgaggtcc gccagccgat cccggccgag
      841 ccgggccaga tcgagcgtta tgactacgag taccgccgta acggcaccgt caatctcttc
      901 gtctgcatcg acgtgcatcg gccatggcgc aaggtcaagg tcaccgagcg gcgggcggca
      961 gaagattacg cccactgcat gcgcgaactc gtcgatgtcc attatcccga tgccgcctgc
     1021 atccgggttg tgcaggacaa cctgtcgacc cattcggccg gcgccctcta tgaagcattc
     1081 cctcccgccg aagcccgccg cattctgcaa cgcctggagt tccactacac ccccaagcat
     1141 gccagttggc tcaacatggt cgaaatcgag atcggcgtgc tgcgcggcca gtgcctggat
     1201 cgcagaatcg acgaccccaa gcgcctcatc agcgaaatcg ccgcatggga gaaacaacga
     1261 aacaccgccg gcgcacgcat caaatggatg ttcacaaccg aaaaagcccg cgccaaaatg
     1321 ggccgcgcct atcccgtcac gtccaaagag tcataatcac tgtgccgagg tactagtggc
     1381 gaagtgattg acgtcattaa cccggcaacc gaacaggtgg cggggcaaat cgcctcgggc
     1441 agcgtcgctg acattgatcg tgcggtagcc gcggccagga ctgcgttccg caccttttca
     1501 aagaccaccc gtcaggaacg caccgatctt ctgaacagtg tactgtccgc ctatgcaagt
     1561 cgccatcagg acttggcgga cgcgctcgtg gaggagctcg gggccccggc caaatttgcg
     1621 aaaggaaatg caggcgggag ttggcttcct tcacctccaa accgctatcg aggcgctgaa
     1681 gacctatgcc ttcgaacacg cccag
//
LOCUS       DATILV010000574         3617 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1928837, whole genome shotgun sequence.
ACCESSION   DATILV010000574 DATILV010000000
VERSION     DATILV010000574.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3617)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3617)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3617
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1928837"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(335..598)
                     /locus_tag="VLJ17_13275"
     CDS             complement(335..598)
                     /locus_tag="VLJ17_13275"
                     /inference="COORDINATES: protein motif:HMM:NF024908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSV23987.1"
                     /translation="MSDSLALIRFLERVMPKPYAVDFRGRVINDVETGASRREAAERY
                     GISPSVVVIWMQRFEEREALRQNQVAAADHGQDDQYQAWFRAA"
     gene            complement(648..1763)
                     /locus_tag="VLJ17_13280"
     CDS             complement(648..1763)
                     /locus_tag="VLJ17_13280"
                     /inference="COORDINATES: protein motif:HMM:NF025606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4344 domain-containing metallopeptidase"
                     /protein_id="HSV23988.1"
                     /translation="MTIISSKSLNIVAAAVMLALTSWTLAAPRAEDAFGNIANGASIF
                     IDGKTFEITPGKARGDVSAQIKSLGARELGPGVIVFRSGDKLYIVGGSGPAAGQQISV
                     AADETQQGPILIAYEAPKNPEHQKIYDLVKERQVLETLQKIFSPFRLPVDLAVKMVGC
                     DGISNAWYLREKSGPTIRLCYEYLQEIHDTMPKETTPAGITPSDAVVGQLFFAMAHEF
                     GHAIFDIFDVPIFGRGEDAADQFAAYIMLQFGGDRAHRLVAGAAFSYREFIKDYQNKP
                     KVTLPLAAFSSDHGTPEERFYNLACLAYGYDAKTFADVVDKEYLPQRRAKYCDFEYQD
                     LANAMRQLIGPHVDREMAKKVLDTRWLTDASTRPALR"
     gene            complement(1918..2496)
                     /locus_tag="VLJ17_13285"
     CDS             complement(1918..2496)
                     /locus_tag="VLJ17_13285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23989.1"
                     /translation="MTDPRCWSTIIAAATVALTSSVSTLAIAQSQDAVRAIANHEGIF
                     IDAKSFNITLGKPKGDVAVQITNLGARELGPGAIIFRSDDKLYIVDAPPVAQQNGQRV
                     AGRRDLQPWEIEHQRTTGLRDLLPSEIERQRPTGLRDLQPSEIERQRPTGLRDLQPSE
                     IERQRMYMIDPEYAHYRLKKAFEEVWGTNEKK"
     gene            3291..3554
                     /locus_tag="VLJ17_13290"
     CDS             3291..3554
                     /locus_tag="VLJ17_13290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23990.1"
                     /translation="MAIKPKLRKEAAALALALLLAGCASTGGTGALTVTGNELGGKIP
                     SGMSDVPSAINAATAHCAKYNKKAALTVMQTQAQGGAVAFICR"
BASE COUNT          719 a         1089 c         1034 g          775 t
ORIGIN      
        1 cacaagccct gttcacagag gccattttac acctcagttt acagtttttg ttcgcttttc
       61 cttccgtacc gaccaccgca gacgataatt cagcgccgct gtgacgtggc ggccagcagc
      121 agcggcactg cgacaactac cttcgctgat tcacggaccc gatgtactca attgttcagc
      181 aaatccgggt tagccggact tgagtagctc ttccaagtca ccgccaacga cggaaacgaa
      241 ataattggtc gtgtcggaac tcaggtgccg gagaagcgac cttgtggcga tgatctggtt
      301 gggcctcgtg aaatctcaac taggtttctg ggcttcaggc tgcacggaac caggcttgat
      361 attgatcgtc ctggccgtgg tctgctgccg ccacttggtt ttgccgcaac gcttccctct
      421 cctcaaagcg ctgcatccaa atcaccacca cactggggct gatgccatag cgttccgccg
      481 cttcacgccg cgaggcaccg gtctcaacat cgttaatcac gcggccacga aagtcgacgg
      541 catacggctt cggcatcact cgctccaaaa aacgaatcag tgccaaagaa tcgctcattg
      601 acaacgccca gggaatcctt ccgattcaag cacagcgaaa tttgctccta acgcagcgcc
      661 ggtcgcgtgc tcgcatccgt gagccacctc gtatccagga cctttttcgc catctcccga
      721 tcaacgtgcg ggccgatgag ttgccgcatc gcgttggcga ggtcctggta ttcgaaatcg
      781 cagtacttgg ctcgcctctg cggaaggtat tccttgtcga ctacatcggc gaaggttttg
      841 gcgtcgtagc cataggcaag gcaggctaga ttgtagaagc gctcttccgg agtgccgtgg
      901 tcgcttgaaa aagccgccag cggcaacgtc accttgggtt tattttggta gtccttgatg
      961 aactccctgt acgaaaaggc tgcgcctgcg accaatcgat gcgcccgatc tccgccgaat
     1021 tgcagcatga tgtacgccgc gaattgatcg gctgcatctt ccccgcgccc gaatatgggg
     1081 acatcgaaaa tatcgaatat cgcatgccca aactcgtgcg ccatggcaaa aaacaactgc
     1141 ccgacgaccg catcgctcgg cgtgatgccc gccggggtcg tctccttcgg catagtatcg
     1201 tgtatctcct gcaaatattc gtagcagagg cgtatcgtcg gacccgactt ttcgcgcaaa
     1261 taccaagcgt tcgaaatgcc gtcgcatccg accattttta cggccagatc gacgggcagg
     1321 cggaatgggc tgaatatttt ctgtaaggtc tcaagcactt ggcgctcttt gaccaggtcg
     1381 tagattttct ggtgctcggg attcttgggc gcctcgtatg caatgagaat cggcccctgc
     1441 tgcgtttcgt ccgccgccac actgatttgc tgacccgccg cggggccact tccgccgaca
     1501 atataaagct tgtcgcccga gcggaagaca atgacacccg gccctagctc gcgggcgccc
     1561 aagctcttga tctgggccga gacgtcaccg cgggcctttc cgggtgtgat ctcgaacgtc
     1621 tttccatcga tgaaaatgct ggcgccgttg gcgatgttgc cgaatgcgtc ttcggcccgg
     1681 ggcgctgcca aggtccacga tgttaaggcg agcatgacag cggcggcgac gatgttcagc
     1741 gacttgctgc taataatcgt cattggctcc tccggtcggg gcgttcatcc ccggcctctc
     1801 gtcgtgcgtc tcacaccaac catgagaggc aaattcttga acggcgaacg gacaagacga
     1861 accgacaggc cctgggctcg tctcatccgc tcccaatgct tgctgagtgg cacgtcctca
     1921 cttcttttcg ttcgtacccc aaacttcctc gaaagccttc tttaacctgt agtgcgcgta
     1981 ctccggatca atcatataca tccgctggcg ctcgatctcc gaaggctgca gatcccgcag
     2041 cccggtgggg cgctggcgct cgatctccga aggctgcaga tcccgcagcc cggtggggcg
     2101 ctggcgctcg atctccgaag gcagcagatc ccgcagcccg gtggtgcgct ggtgctcgat
     2161 ctcccaaggt tgcagatccc gccgcccggc aacccgctga ccgttttgct gcgcgaccgg
     2221 cggggcgtcg acgatgtaca gcttgtcgtc cgagcggaag atgatcgcgc ccggccccaa
     2281 ttctcgggcg cccagattgg tgatctggac ggcgacgtca ccctttggct ttcccagggt
     2341 gatattgaac gattttgcgt cgataaaaat gccctcgtga ttggcgatgg cgcgaaccgc
     2401 gtcttgcgat tgggcgatcg ctagggttga aacgctagat gtcaaagcga ccgtcgccgc
     2461 ggcgattatc gttgaccagc acctcggatc tgtcatgaaa cctcctgcac ctgatgtttg
     2521 cgccttgatg atgggctggt atgtcagctg cggcccgcag gcccgggttg cctctcctta
     2581 cgtcaccgcc aaaggttgat tgatttcatg tgcgatcaag gcggccatct gccaagctcg
     2641 gattcagatc tgggctccgc aggaagcggc gattggtcgg gcatctcatc aaagtacctc
     2701 ccattgcttt gcgctgttgt gtttcaagtt atctgaaaac gtgatccctt gaattgacaa
     2761 aaggcaatcg gaccggcctc tttgcctaaa agaaccaacc gggcacttcc gcccgaatgg
     2821 gcgtgggggg ctgtcggcga ccatgaccac ttgtgaggcg aggatttacg aattcgccat
     2881 ggacacgtcc ggacgatgac gccgcgcttg ccggagctga ctgtaaatcc aaatggttcg
     2941 agtgatctat cagcgtccat tccgaaaaat cgcggaaata ccaagtctgt gggtccaata
     3001 ggttggcgtc aatttcggaa tgcaaatcgt tcccgcaagt tgccgtgatc ggggggccaa
     3061 agcggaggag cgctaccgtc aaaagcgact cgtcgcagcg cgaattgagt agcgcgccat
     3121 gctccaagcc gtcggcgtca tagtggtgcc gctcgccgcc gtgcgtgtcg gctgggagaa
     3181 ccgcgcggcg ttcctactgc cggtgatcgg catcgccgct gcggtgcggc tgttcgctcc
     3241 gagccagggg aagctgtgga cgactgccgc ccgcccgcct atagttcacc atggcgatca
     3301 agcccaaact aaggaaagag gccgccgcac tggccttggc attgctgctc gctggttgcg
     3361 ccagcacggg cggaaccggg gcgctgaccg tcaccggcaa tgagctgggc ggaaagatcc
     3421 ctagtggcat gagcgacgtg ccatcagcaa tcaatgcggc gacggcccac tgcgcgaaat
     3481 acaacaagaa ggccgcgctg accgtgatgc aaacgcaagc gcagggcggc gccgtggcct
     3541 tcatatgccg ctagcgctta gtggctggga tgaagtgcac catcattcgc agccggcgca
     3601 tgatctacgg ctcggac
//
LOCUS       DATILV010000575         8081 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2181863, whole genome shotgun sequence.
ACCESSION   DATILV010000575 DATILV010000000
VERSION     DATILV010000575.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8081
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2181863"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..385
                     /locus_tag="VLJ17_13295"
     CDS             <1..385
                     /locus_tag="VLJ17_13295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase (quinone)"
                     /protein_id="HSV23991.1"
                     /translation="GLIIGNTTVARPATLTSPDRNAPGGLSGKPLFAPSTACLAAMYR
                     FTEGRIPIIGCGGIASGSDAYAKIRAGASLVQLYSALVFRGPGLVTRIKSELATLLRR
                     DGFASVADAVGADRDASPSSRKAAP"
     gene            complement(506..1306)
                     /locus_tag="VLJ17_13300"
     CDS             complement(506..1306)
                     /locus_tag="VLJ17_13300"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HSV23992.1"
                     /translation="MVLKSKSLAQERFGAFAATYATSRPHAKGGSLARLVELVAPQPT
                     WIALDIATGAGHVALALAPHVAHVVASDLTPQMLEVARGLARERKIHNMSVADVRAEG
                     LPFADATFDLVTCRIAPHHFDDVRQFVVESARVLRPGGVFGLVENISPDPSVMEGDVG
                     AFAAAADEYNAFEKLRDPSHVRCLTLTEWRDLVAQAGLNERHLELLDKPMVFGPWADQ
                     QSVGDSTKQELKSMLLDGSTVFRAFVRPQENNGDVDFILTEAVLIGVK"
     gene            1455..2012
                     /gene="idi"
                     /locus_tag="VLJ17_13305"
     CDS             1455..2012
                     /gene="idi"
                     /locus_tag="VLJ17_13305"
                     /EC_number="5.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013215018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004452 - isopentenyl-diphosphate
                     delta-isomerase activity [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isopentenyl-diphosphate Delta-isomerase"
                     /protein_id="HSV23993.1"
                     /translation="MDAFSTGSDDGDPIVLVDADDVSQGVAPKIEVHRLGLKHRAVSV
                     LVRNRTGDMLVHRRHPAKYHSGELWTNACCSHPRPGEPPGGAAQRRLAEEMGVRCEVR
                     PLFTAHYRAAVSNGYIEDEVVHVFGGTYEGSIAPDPAEVSEWKWVPLAELAEDLTRRP
                     ELYTVWFRHYFREHYDVIATWMESG"
     gene            complement(2053..4380)
                     /locus_tag="VLJ17_13310"
     CDS             complement(2053..4380)
                     /locus_tag="VLJ17_13310"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HSV23994.1"
                     /translation="MIGLRLPRLEDHALLTGRGCFVDDVAIAEPLHAAFVRSPHPHAL
                     IRAVHTDKARALPGVSAVLTLDDIAPAMAKRRMVRTSNSGTPLDRCWAFALADGEVSY
                     VGEPTALVLATNRYVAEDAAALVEVDYDVLASAGDCRKAALADAPVVRREVSSNVISS
                     YRLRYGDIEAAFRDAAHIFRESFWPHRGAAHPIEGRGIAVEHRKSDGSLVVYASTQKA
                     HDLFNTLTSLLGLDENRLRIATPDVGGGFGPKLCVYAEDVAVVAAAMLLGRSVKWIED
                     RREHFLGAVQERDQHWSMEIALDAAGRILGLRGRLLHDLGAYALQDVNLPYNSASTLT
                     GPYAISAFTMEVAITLTNKVPVSSVRGAGYPQASFVMERLMDIAAHELRLDRAELRRR
                     NLIPATKMPYTKPLKTRAGATIVYDSGDYPACQAAILAAVGWDGFSTRQAAARAQGRL
                     IGLGLAHAMKGTGRGPFESGVVRVSPSGRISVYTGAAAMGQGLKTALAQICASELGVA
                     PHAVQVISGDTAAVPVGLGGFASRQTVTAGSSVLLAARAVARKARKLASHVLEVAEND
                     LELADGRLRVAGAHQLNVSLGELARILQGAPGYGFPPGMEPALQETCHFRTDALAYAN
                     ACHAAEVEVDVETGEVSILRYVALQDSGILVNPLIVDGQLHGGIAHGIGNAVLERMEY
                     DDAGQPLTTNFAEYLLPTAPTFPMFETLYKQTPSPLNPLGAKGAGEVGTIPAAAAVIS
                     AVEDALRPYGVRITRYPVTPVLLRELIENATRRSL"
     gene            complement(4382..5410)
                     /locus_tag="VLJ17_13315"
     CDS             complement(4382..5410)
                     /locus_tag="VLJ17_13315"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSV23995.1"
                     /translation="MKRTRIACLTFAFGAMGSLALTDSARAQSVADFYRGRNVTLVIG
                     FSVGGGYDLYGRLLARHLGKHIPGQPSIVPQNREGAGSERAVLYLYNAAPKDGTVIGT
                     FSRSMAVAPLLTNAPFDATKLSWLGSISSDVSVCMTWYTSPIKTFDDMLATSFTMGGL
                     GKDADPDIFAMVLRNVFGAKLKLVSGYPGTNDGTLAMERGEVSGMCGISWSTARARHA
                     DWLKAKKVNMPVQFGLRKEAAIADVPAVMDLVKGEEQTRMVRLILAGQAMARPYAAPP
                     GIPDDRRRGLIAAFDATMKDPEFLADAEKLQADVSPVSAGEIDKLLADVYATPKDIIA
                     KAAKAIAN"
     gene            complement(5568..7037)
                     /locus_tag="VLJ17_13320"
     CDS             complement(5568..7037)
                     /locus_tag="VLJ17_13320"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSV23996.1"
                     /translation="MSLTVAANSESRVQYRGLRGWLDQVEQLGELQRVNGAHWDVEMG
                     AITHMLTEKSRGNAPAILFDAIPGYPKGYRTLYGQLSSIRRIALTLGLPLEHDRKVDI
                     VQRYHERMRDLRPLPPREVKDGPIFENVIGGAAVDVLKLPVPRHHELDKARFIGTADC
                     VITKDPDEGWFNLGAYRSQVYDGKTIGCQITEGKHGRVHRDKYFERGEPMKVVILCGQ
                     DPLLFMLSSSPLPEIGEMDIAGGLRGEPIDVVRGPYTGFPIPADCEIAIEGETVPGQV
                     RPEGPFGEWMGYYSDDTVPRPYVTVKTILHRNDPILTCAPQHKPVDETGLLKGIAGAS
                     QVWRALEASGIPDVLGVWNHEAGPATRFTAIQIRQRYPGHARNTLHIAANCQGGAYAG
                     KWTVVVDEDIDAGDLDQVLWAMCTRFDPVTDIDLIQKAWASKRDPLYLPGNFNNRILI
                     DACIPYEKKLNKTFPMVVDVSADLRSQLRAKFPALFPQH"
     gene            complement(7256..>8081)
                     /locus_tag="VLJ17_13325"
     CDS             complement(7256..>8081)
                     /locus_tag="VLJ17_13325"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV23997.1"
                     /translation="EIIRFAGTPPMITALAAGELEIADLTYPTLPIAIQNAGMDDLRV
                     IADEFQDGNAGFYSNEFMVLADGPIKKVEDLKGKAVATNAAGSAVDIAMRAMLRKHRL
                     EDKRDYTIVEAPFPTMRAMLAEKKVDLVPAVLPFSLDPELRKVGRTLFDTKDAIGISQ
                     FSVWVARKSFIDKNRAALTDFMEDSLRIVRWYLDPVNHKEAMEICARITKQPAERFSW
                     VFTNKDNYRDPNMLPDLAALQRNIDLTRDLGFIKASFDVKKFADLGIVQAAAKRLK"
BASE COUNT         1532 a         2538 c         2520 g         1491 t
ORIGIN      
        1 cggtctcata atcggcaaca ccaccgtggc gcggccggcc acattgacga gccccgaccg
       61 taacgcgccc ggaggattat ccggcaagcc gctgttcgca ccgtcgaccg cgtgccttgc
      121 cgcgatgtat cggttcacag aaggcagaat tccgatcatc ggatgcggcg gcattgcaag
      181 cggctccgac gcctacgcaa aaatccgcgc tggagcctcc ctggtccagc tctattcggc
      241 gctggtattc cgggggccgg gcctggtcac ccggatcaaa agcgagctcg cgacgttatt
      301 gcgaagggac ggttttgcgt ctgtggcaga tgcggtcggc gctgatcgag atgcctcgcc
      361 gtcttcgcgg aaggcggcgc cataggcgct gggggatcac tcggttccct ccccgtcttc
      421 ggggaggggc gggtctattc cacagcaaag ctttgcccgt gtctccccaa ccggtgcttc
      481 gcgccaccct ccctgaagac gggagttact tcaccccgat aagcaccgcc tcggtaagga
      541 tgaaatccac atcgccattg ttttcctgcg ggcgcacgaa ggcgcggaag actgtagagc
      601 catccagcaa catggacttc aattcctgct tggtgctatc tccgacactt tgctgatccg
      661 cccacgggcc gaacaccatc ggtttatcga gcagctccaa atgacgttca ttaagccctg
      721 cctgtgccac caggtcgcgc cattcggtca gcgtcaggca gcgcacatgg ctcgggtccc
      781 ggagcttttc gaaagcattg tattcgtcgg ccgcggcggc aaacgcaccg acgtctcctt
      841 ccatcacgct cgggtccggc gagatattct cgaccaggcc gaacacgccg ccgggccgca
      901 gcacgcgggc agattcgacg acgaattggc gcacatcatc gaagtggtgc ggcgcaatcc
      961 ggcacgtcac gagatcgaag gttgcatccg caaaaggcag gccttcggcg cgtacatcgg
     1021 caaccgacat gttgtggatc ttgcgttcgc gggcaagccc tcgcgccact tcgagcattt
     1081 gtggcgtcag gtcggaggcc accacgtggg cgacatgggg ggcgagcgcc agtgccacat
     1141 ggccggcgcc ggtagcgatg tccagcgcga tccaggtggg ctgaggggca acgagctcga
     1201 ccaaccgggc gagactgccg cccttggcgt gggggcgact ggtcgcgtac gttgccgcaa
     1261 acgctccaaa ccgttcctgg gccagcgatt tcgatttaag taccatcaat tgcctccgcg
     1321 tcgattcgaa atcgcccgac cgccaaatca ccgaacccca gcatttcaga caaggcaagg
     1381 cgaatcatca gctgttcaat cgccgtaaca gcatgcttaa atagtagtcg gctagggtag
     1441 ggaggctagg aaaattggac gcgttttcta ctggatcgga cgatggcgac ccgatcgtcc
     1501 ttgtcgacgc agatgatgtc tcgcaaggcg ttgcaccgaa gatcgaggtg cataggcttg
     1561 ggctgaaaca ccgagcggtc tcggtgttgg tacgcaaccg cacgggcgac atgctggtgc
     1621 atcgccgcca tccggcgaag tatcattccg gcgagctgtg gaccaacgcc tgctgtagcc
     1681 atccgcggcc cggggaaccg ccgggcgggg cggcgcagcg acggttggct gaagaaatgg
     1741 gagttcgctg cgaggtcaga ccgctgttca ctgcccacta ccgggccgca gtttcgaacg
     1801 gctacattga ggacgaggtc gttcatgtgt tcggtggcac ctatgaagga tcaatcgcac
     1861 cggatccagc cgaggtgtcg gagtggaaat gggtgccgct cgccgaactg gccgaagatc
     1921 tgacgcgccg gccggaactc tacaccgtgt ggtttcgcca ctatttccgc gagcactatg
     1981 acgtcatcgc gacgtggatg gagagcgggt gatcgcaccc gatcggttgg gtgggtacgc
     2041 ttcgagtcca ccctacaaac tgcggcgcgt cgcattttcg atcagctcgc gcagcagcac
     2101 cggcgtcacc gggtatcggg taatccgcac accgtacggc cgcagcgcat cctcaaccgc
     2161 ggaaatcacg gctgccgccg ccgggatggt gccgacctcg ccggcacctt tggcgccgag
     2221 tggattgagc ggcgacggcg tctgcttgta tagcgtttcg aacatcggaa acgtcggcgc
     2281 ggtgggcaac aagtattcgg caaaattggt cgtcagcggc tgaccggcgt cgtcgtattc
     2341 cattcgttcc agaacggcgt taccgatccc gtgagcgatg ccgccgtgga gctggccgtc
     2401 gacgatcagc ggattgacaa ggattccgga gtcctgcagc gccacgtagc gcaggatgct
     2461 gacctcgccg gtctctacgt ccacctcgac ctcggccgca tggcaggcgt tcgcgtaggc
     2521 aagcgcatcg gtacggaaat ggcaggtttc ctgcaatgcc ggctccatgc cgggcggaaa
     2581 cccatagccc ggcgcgccct gcaggatgcg ggcaagttcg ccgagcgaca cgttcagttg
     2641 gtgggcgccg gcgacgcgca gccggccgtc cgcaagctca agatcgtttt ccgcaacctc
     2701 aagcacatgg ctggcaagct ttctggcctt gcgagcaacc gcccgggcgg ccagcaggac
     2761 cgaggaacct gccgtgacgg tttggcggct cgcgaagccg ccgagtccga ctggcaccgc
     2821 tgcggtgtcg ccggagatca cctgcacggc atggggcgcc acgccgagct cgctcgcaca
     2881 aatctgcgca agcgcggtct tgagcccctg acccatggcg gcggcgccgg tgtagacgga
     2941 aatgcgcccg gacggcgaaa cgcgcaccac gccggactcg aacgggccgc ggccggtgcc
     3001 tttcatggca tgggcaagcc cgagcccgat caaccggcct tgcgcccgcg cggccgcctg
     3061 ccgcgtcgaa aatccgtccc agcctaccgc ggcgagaatg gccgcctgac aggctggata
     3121 atcgccgctg tcatacacga tggttgcgcc agctcgggtc ttgagcggct tggtgtaggg
     3181 catcttggtg gccgggatca aattgcgacg ccgcagctcg gcgcggtcga ggcgcagttc
     3241 gtgtgcggcg atgtccatca gtcgctccat cacgaaggag gcctgcggat agccagcacc
     3301 gcgcaccgag gacaccggca ccttattggt cagcgtgatg gcgacctcca tggtaaatgc
     3361 cgaaatcgcg tagggacccg tcagggtgga tgccgagttg tagggtagat ttacgtcctg
     3421 tagcgcatag gcaccaagat cgtgcagcag acggccgcgc agcccgagaa tgcggccggc
     3481 tgcgtcgaga gcaatttcca tcgaccaatg ttggtccctt tcttggacgg caccaaggaa
     3541 atgctcgcgc cgatcctcga tccatttcac cgaacggccg agcagcatgg cggccgccac
     3601 cacagcgaca tcctccgcat aaacgcaaag tttcggaccg aagccgccgc ccacatcggg
     3661 ggtcgcgatt cgcaggcggt tctcatcaag accgagtaac gaagtaagcg tgttgaatag
     3721 atcatgcgcc ttctgggtcg acgcatacac gactagcgac ccatcggact tgcggtgttc
     3781 gaccgcaata ccgcgacctt cgatcgggtg cgcggcgcca cgatgcggcc agaagctttc
     3841 gcgaaagata tgtgcggcgt cccggaaggc cgcttcgata tcgccatagc ggagccggta
     3901 cgacgagatt acattggacg agacctcacg ccgcaccact ggagcatcgg cgagcgcagc
     3961 cttgcggcaa tcgccagcgg acgccagcac gtcgtaatcg acctcgacca gcgcggcagc
     4021 gtcctccgct acatagcggt tggtcgccag gacaagtgcc gtcggctctc ccacatagga
     4081 cacctcgcca tcggcaagtg cgaaggccca gcagcgatca agcggcgtgc cggaattcga
     4141 tgtccgcacc atgcgccgct tcgccatcgc gggcgcgata tcgtcgagcg tgagcacggc
     4201 agagacgccc gggagtgccc gcgccttgtc ggtgtggacg gctcggatca gcgcgtgcgg
     4261 atgcgggctg cgaacgaacg ctgcgtggag tggctccgcg atcgctacat cgtccacaaa
     4321 gcagccgcgg ccggtgagca gcgcatgatc ttccaaccgc ggcagacgta aaccgatcat
     4381 ttcaattcgc gatcgccttg gcggccttgg cgatgatgtc cttgggcgtc gcatagacgt
     4441 cggcaagcag cttgtcgatt tcgccggccg acaccggact aacgtccgcc tgcaatttct
     4501 cggcgtcagc aaggaattcc gggtccttca tggtcgcgtc gaaggcggcg atcagcccac
     4561 ggcggcgatc gtccggaatg ccggggggag ccgcataggg gcgcgccatg gcttggccgg
     4621 caaggatgag gcggaccatc ctcgtctgct cctcgccctt gacgaggtcc atcacggccg
     4681 gaacgtccgc aatggcagcc tccttgcgca gcccgaactg caccggcatg ttgaccttct
     4741 tggccttcag ccaatcggca tgccgggccc tggcggtgct ccacgagatg ccgcacatgc
     4801 cgctcacctc gccgcgctcc atcgccagag tgccgtcgtt ggtgcccgga tagccgctga
     4861 cgagcttgag tttggcccca aatacgttac gtaagaccat tgcgaaaata tcggggtcgg
     4921 cgtccttgcc aaggccgccc attgtgaaag acgtcgccag catatcgtcg aacgtcttga
     4981 tcggcgaggt gtaccacgtc atgcagacgc tgacgtccga ggatatactg ccgagccagg
     5041 acagcttcgt ggcatcaaat ggtgcattgg tgagtagcgg cgcaactgcc atgctgcgtg
     5101 agaaggtgcc tatcacagtg ccgtccttcg gggccgcatt gtagagatag agcacggcgc
     5161 gctcgctgcc cgccccttcg cggttctggg gcacgatgct gggctgcccc ggaatatgct
     5221 tgcccagatg gcgcgccagc agacgaccgt agagatcgta accaccgccg accgaaaatc
     5281 cgatgactag cgtgacattg cggccgcgat aaaagtccgc gacactctgc gcacgggccg
     5341 aatcggtaag tgcgagagag cccatcgccc cgaacgcgaa cgtcagacaa gcgatcctag
     5401 ttcgcttcat cgcattcctc cacgagcatt cttctgtttg gcccatccta tcaggtgtcc
     5461 ttgcctcgct agaccgggca atcaagtaac cacggacggt gctacgagat cgcccagtca
     5521 agccgggcga cgacagcatg gtaggtgtca accatatcga acaacctcta gtgctgcgga
     5581 aacagcgccg gaaacttggc ccgcaattgc gaccgcaaat ccgcgctcac atcgaccacc
     5641 atcgggaatg tcttgttgag cttcttttcg tacgggatgc aggcgtcgat caggatgcga
     5701 ttattgaagt tgcccggcag atagagcgga tcgcgcttcg aagcccaagc cttctggatc
     5761 aggtcgatgt cggtcaccgg atcgaaccgc gtgcacatcg cccacaacac ctgatcgaga
     5821 tcgccggcgt ctatgtcctc atccaccacc acggtccatt tgcccgcata ggcgccgccc
     5881 tggcagttcg ccgcgatatg gagcgtattg cgggcatggc ccggatagcg ctgccggatc
     5941 tggatcgccg tgaaacgggt cgcgggccca gcctcgtgat tccacacgcc gagcacgtcc
     6001 ggaatgccgc tcgcttccag cgcgcgccaa acctgcgacg cgcccgcgat gcccttgaga
     6061 aggccggtct cgtcgaccgg cttgtgttgg ggcgcgcaag tgaggatcgg atcgttgcgg
     6121 tgaaggatgg ttttcaccgt cacatagggc cgcggcacgg tgtcgtccga gtagtagccc
     6181 atccactcgc caaacgggcc ttcgggccgc acttgccccg gcacagtctc accctcgatg
     6241 gcgatttcgc aatcggccgg gatcgggaag cccgtgtaag ggccgcgcac tacatcgatc
     6301 ggctcgccgc gcaagccgcc ggcgatgtcc atctcgccga tttccggcag cgggcttgag
     6361 gagagcatga acagcagcgg atcctggcca cacaggatca ccaccttcat aggctcgccg
     6421 cgctcaaagt acttgtcgcg gtggacgcgt ccgtgcttgc cctcggtgat ctggcagccg
     6481 attgtcttgc cgtcatagac ctgggagcga taggcgccga ggttgaacca gccctcgtcc
     6541 ggatccttgg tgatgacgca atctgcggtg ccgatgaagc gcgccttgtc gagctcatga
     6601 tgccgcggta ccgggagttt gagcacatcg acggcggcgc ccccgatgac gttttcgaag
     6661 attggtccgt ctttgacttc gcgcggtggc agcggcctga ggtcgcgcat acgctcgtga
     6721 tagcgctgca caatatcaac cttgcggtca tgctcgagcg gcaaccccag cgtgagggca
     6781 atgcgtcgaa tcgatgacaa ctggccgtaa agggtgcggt agcccttcgg ataacctgga
     6841 atcgcgtcga acagaatcgc gggcgcgttg ccgcggctct tttccgtcag catatgggta
     6901 atggcaccca tctcgacgtc ccaatgggcg ccgttgacgc gctgcaactc gcccaactgc
     6961 tcgacttgat cgagccagcc acgcaggccg cgatattgaa ccctggattc agaattggca
     7021 gcgaccgtga ggctcatgat cgattccggt tagagcatgc gctcgagcag cccttccaac
     7081 gtcatgcccc gcgcagagac accccgccgc gtaacgcggc gaggaccatc ttcgcgggca
     7141 tccacgtctt ctttgtcgag cttcagcaag caaggcgttg agggccggaa caagcccggc
     7201 catgactgcg cagaagtggc gcgatacagg cagatccgca cttttcaatt gcttgctact
     7261 ttagccgctt ggcggcggcc tgcacaatgc cgaggtcggc aaacttcttg acgtcgaagc
     7321 tcgccttgat gaacccgaga tcgcgggtga gatcgatgtt gcgctgcagc gccgcgaggt
     7381 ccggcagcat gttcggatcg cgatagttgt ccttgttggt gaagacccag gagaaccgtt
     7441 cggctggctg cttggtgatg cgcgcgcaaa tctccatcgc ctccttgtgg ttcactggat
     7501 cgaggtacca gcgcacgatg cgcagcgagt cctccatgaa atccgtgagt gccgcgcgat
     7561 tcttgtcgat gaagctttta cgcgctaccc agacggagaa ttgcgaaatc ccgatcgcat
     7621 ctttggtgtc gaatagcgtc cggccaacct tgcgcaattc cgggtcgagc gaaaacggta
     7681 ggactgccgg cacaagatcg accttcttct cggccagcat ggcgcgcatg gtgggaaacg
     7741 gcgcctcgac gatggtgtag tcgcgcttgt cctcaagccg gtgcttgcgc agcatggcgc
     7801 gcatcgcgat atcgacggca cttccagccg cattggtggc gaccgccttg cccttgaggt
     7861 cctcgacctt cttgatcggg ccgtccgcca gcaccatgaa ctcgttgctg tagaagcccg
     7921 cattgccgtc ctggaactcg tcggcgatca cccgcagatc gtccatgccg gcgttctgga
     7981 tcgcgatcgg cagcgtgggg taggtaagat cggcaatctc aagttcgcca gcggccagtg
     8041 ctgtgatcat cggcggggtg cccgcaaacc ggatgatctc a
//
LOCUS       DATILV010000576         1746 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4224904, whole genome shotgun sequence.
ACCESSION   DATILV010000576 DATILV010000000
VERSION     DATILV010000576.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1746
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4224904"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            536..733
                     /locus_tag="VLJ17_13330"
     CDS             536..733
                     /locus_tag="VLJ17_13330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23998.1"
                     /translation="MLGAIRPPCDAGVIRSTPTFLSGLSQQRKRLTLAATILGSSMAF
                     IDGSVVNIALLQSSRRCVPMR"
     gene            complement(1045..1233)
                     /locus_tag="VLJ17_13335"
     CDS             complement(1045..1233)
                     /locus_tag="VLJ17_13335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV23999.1"
                     /translation="MRTVETPSAVGTGWRRILSQLHRTIAAVETSPMEILYERVLQLE
                     QEVSALKRNLLIGSVDHE"
     gene            1485..>1746
                     /locus_tag="VLJ17_13340"
     CDS             1485..>1746
                     /locus_tag="VLJ17_13340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24000.1"
                     /translation="MMSIFQKSGRWRNPGPGAQPREGGEARPKVELVVGDFNDPASLK
                     PAFASVDEAFVVVNGKNLNRLEANALDRSRAFKRLRLRWRQRE"
BASE COUNT          377 a          487 c          486 g          396 t
ORIGIN      
        1 ggattgtccg gcagttgcgc cgagcttcag tcatgcgctc gttttgattc cgatcggtcg
       61 cttgagcgat tcgtattgca ttcgtcaaag taggaggaaa tttcttgagc gacgcgctgc
      121 tgccacatct cggcttgcag cagccagtgg gctctattcg cggcatcaag gaccgcacgc
      181 tgccggcatt tggactcttg agtgcgatat tccacgagct tccgcatgcg cgcctccttg
      241 gaggagtctg gttaggacca ttctatgacg tgaccttgac agctttcagt gatcacctcg
      301 tgttgctcca tcaacaggtc gatttcttgt gtgtagccgg acaaataccg gttagttcag
      361 agcagtttgt gcaggtaact ggctgtgcca agaaacaatc aggcggaggc aaacatggat
      421 caacctcacc ctcgcggggg ttgattgtag cttttctcat cgtacttctg tcccactctg
      481 ccccacctgc tttttgtccc gcgaccggcg catcaaccgt ctgggaggag ggcccatgct
      541 cggtgcgatc aggccaccat gcgacgcagg cgtcatccgc tcgacgccga cgttcctctc
      601 cgggctgtcg cagcagcgca agcgtctgac cctggcggcg acaattctcg ggtcgagcat
      661 ggcgttcatc gacggctcgg tcgtgaacat cgcgctcctg caatccagca ggcgctgcgt
      721 gccgatgcgg tgatgaccta atggatcgtc aacgcttatc tgttgttgcc acctgactga
      781 aaggccagca agatggccgc aaagacggct aatgatctga tccacagaac catcgactac
      841 ctttcgcgct gctgtagaga taggctgcgc ttacttcacc ttcattcggc tcggatcgcg
      901 aaaatggaaa ttcgggatcc ttaggaggcg tggaagcgaa gtcgaagcgg tgtcccagga
      961 ttccgataag ctggtgcacg atgaagacac ctatccgaag accgtcgcgc cgcgctgctg
     1021 cgcttattgc tggccccagt cgattcactc gtggtctaca gagccgatca gcaaattgcg
     1081 cttgagcgca gacacttcct gttcaagttg caagacccgt tcatagagaa tctccatggg
     1141 agacgtctca accgccgcga tcgtccggtg aagttggctc aggatccttc gccatcctgt
     1201 gccgacggcc gacggcgtct ctactgttcg catgttcgct cccgtaagct gggtagaaac
     1261 ggcgtcctga cgcggacaga cgaacgtgat tcgcgtaaga gccgtccgca acgcattcgc
     1321 cgcatttggc gattgcattt attagatgat aattgacatc tatatctcaa gcgagaacgg
     1381 acggacaagc gaaataaacc actcacacac gaaagtgata tgcgtcccaa agctgatcag
     1441 gatcgaattg aaattcaaat gtcagtcgat tgcaatttca atatatgatg tccatcttcc
     1501 aaaaaagtgg acgatggcga aatccgggcc ctggtgcgca accgcgcgaa ggcggcgaag
     1561 ctcggccgaa ggtcgaactc gtcgtcggcg acttcaacga tcccgcaagt ctgaaaccgg
     1621 cattcgccag tgtggatgag gcgtttgtgg tcgtgaatgg caagaatctg aaccggctcg
     1681 aagccaacgc cttagatcga tcacgtgctt tcaagcggct tcggcttcgg tggcgtcaac
     1741 gcgagc
//
LOCUS       DATILV010000577         4207 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4224923, whole genome shotgun sequence.
ACCESSION   DATILV010000577 DATILV010000000
VERSION     DATILV010000577.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4207
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4224923"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..182)
                     /locus_tag="VLJ17_13345"
     CDS             complement(<1..182)
                     /locus_tag="VLJ17_13345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015242302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HSV24001.1"
                     /translation="MITFRINGRAVETDVDNDTPLLWVIRDNLGLTGTKFGCGIGMCG
                     ACTVHVGGRPTRSCITP"
     gene            complement(204..1496)
                     /locus_tag="VLJ17_13350"
     CDS             complement(204..1496)
                     /locus_tag="VLJ17_13350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012754140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HSV24002.1"
                     /translation="MAKRLLIGIVGLGILGILGFSALAWRPAIAPIAPPAPGRFAPAL
                     VAKGEALAGGGFCAECHTAKGGQEFAGGYPMATPFGLIYSTNITPDPDTGIGNWSEAA
                     FARAMHEGVARDGSLLFPAFPYDHFTKLSDDDVRALYAYFMTRTPVRAPAQENGLPFP
                     LKIRYLQAGWRLLFFRSARFEPDALKSNEWNRGAYLSEALSHCSACHTPRNLLGAEKA
                     DHAYAGAVVDNWIAPPLTAANPTPVPWTQDELFSYLRKGFSVAHGSAAGPMAPVVHGL
                     SALPDQDVQALANYFADVDKANDRLASIGPAIARAMSYASLGADKDDADARLYTAACA
                     SCHYNSGQPLVMRPDLSLNSALNLPDPTNLIQVILNGINAKDGIPGVVMPSFAQALSD
                     ADIARIAAYLRRTRTNLPPWSDLESKIAALHRQIVGSQ"
     gene            complement(1882..2007)
                     /locus_tag="VLJ17_13355"
                     /pseudo
     CDS             complement(1882..2007)
                     /locus_tag="VLJ17_13355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003544754.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
     gene            complement(2417..2875)
                     /locus_tag="VLJ17_13360"
     CDS             complement(2417..2875)
                     /locus_tag="VLJ17_13360"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV24003.1"
                     /translation="MFGNDLLENPSARFRLATDVTPTSINPANLATIADLLAKVEQLL
                     RQPTESRETILTVGPLQLDLLTRIVKRDERKIDLRPREFCLLEFMMRRKGHVLTRATL
                     FKEIWNYKFVPQSNLVDVHMGRLRSRIDQAGERPMIFSIRGQGFVLRAPE"
     gene            complement(3315..3389)
                     /locus_tag="VLJ17_13365"
     tRNA            complement(3315..3389)
                     /locus_tag="VLJ17_13365"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3355..3357),aa:Val,seq:cac)
     gene            complement(3501..3923)
                     /locus_tag="VLJ17_13370"
     CDS             complement(3501..3923)
                     /locus_tag="VLJ17_13370"
                     /inference="COORDINATES: protein motif:HMM:NF019911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PEGA domain-containing protein"
                     /protein_id="HSV24004.1"
                     /translation="MDFMSSKPSTINTVVRVESEPPGAEAKAPGGQGCRTPCSLNVAA
                     AGDFTVNFALNGYLPQSVSARVFPPDDPRGDSEFASSALVGPRVVPDPIFAALEPAPP
                     SAHKKPPTRPRISAVKPPPTPAPTPAPAAAAAFPAPPR"
BASE COUNT          847 a         1197 c         1339 g          824 t
ORIGIN      
        1 ggcgtgatgc aagagcgggt ggggcgtcct cccacgtgca ctgtgcaggc gccgcacatg
       61 ccgatgccgc agccaaattt cgtgccggtg aggccgaggt tatcccggat gacccacaac
      121 agcggcgtgt cattgtcgac atcggtctcg acggcacggc cattgatacg aaatgtgatc
      181 attttcaatc tccggacgcg atcttattgc gagccgacga tctgccgatg caatgcggcg
      241 atcttcgatt cgaggtctga ccaaggcggt aaattcgtgc gcgtgcgccg cagataggcc
      301 gcgatgcgag caatatcggc gtcgctcagc gcctgcgcaa agctcggcat gacgacgccc
      361 ggtattccgt ccttggcatt gatgccgttc agaatgacct gaatcagatt ggtggggtcg
      421 ggcaggttga gcgcgctgtt gagcgagaga tccggccgca tcacgagcgg ctggcccgaa
      481 ttgtagtgac aggacgcgca tgcggctgtg taaaggcgcg cgtccgcgtc gtccttgtcg
      541 gcaccaagag aagcatagga catcgcacgc gcgattgccg gaccgatgga cgcaaggcgg
      601 tcgtttgcct tgtcgacatc ggcgaaatag tttgcgaggg cctggacgtc ttggtccgga
      661 agcgcggaaa gaccatgcac caccggcgcc attggtccgg cagcgctgcc atgtgcaacg
      721 ctgaagccct tgcgcaaata gctgaacagc tcatcctgcg tccatggcac gggagtagga
      781 ttggcagctg tcagtggcgg cgcgatccag ttgtcgacca ccgcaccggc ataggcatga
      841 tccgcttttt cggcaccgag taggttgcgc ggcgtgtgac acgcgctgca gtggctcagt
      901 gcctccgaca agtaggcccc acggttccat tcgttactct ttagggcatc cggttcgaag
      961 cgcgcggaac ggaagaacag caaccgccat ccggcttgca ggtagcgaat cttgagtgga
     1021 aacgggagac cgttctcctg cgccggggcg cggaccggcg tgcgcgtcat gaagtaggca
     1081 tacagcgccc gcacgtcgtc atcggaaagc ttggtgaaat ggtcataggg gaacgccggg
     1141 aagagtagcg aaccgtctcg tgccacgcct tcgtgcatgg cgcgcgcaaa ggcggcctcg
     1201 gaccagttgc cgatcccggt gtctggatca ggggtgatgt tggtcgagta aatcaggccg
     1261 aagggggtgg ccatgggata gccgccagcg aattcttgtc cgcccttggc cgtgtggcac
     1321 tccgcgcaaa atccgccgcc ggcaagtgcc tctcctttag cgaccaaggc cggcgcgaaa
     1381 cgccccggcg ccggtggggc gattggcgca atcgctgggc gccatgccaa agcactgaag
     1441 ccaaggatgc ccaggattcc aagcccgacg atgccgatga ggagacgctt tgccatttct
     1501 acgagtgctt ttctgagcgc taggctattg atggcggcac gttgcgcccg ctcagctaac
     1561 gcgccacgac agcatcaaat tgaaaaccgg gttggcgcgc cattaaattg cggtttacaa
     1621 atctaaattc gaaccaatgc aggacgagtc gagtggagct gcctgttata agtcgcgtgc
     1681 caaaacttcg gtgctgcggc gttcgaacgg ctggagtgcc attcgggaaa aatcactcgt
     1741 tcgctctgag gcaagttggt ttggcataaa cggcagggcc agtcgctgcc aaacgtcaac
     1801 cgagccccac cagagtcatg ctgactcgga gcgtcggctt gcctcggaac caggtgcggc
     1861 gcatgcctcg tcgatccaca cttacaacaa gcttgtgatg gccacatcgt tgcgttgttc
     1921 gcacagcccg tgcgtctccg gcatgttggc ggccagctgt ttgttgtcgt cgcgcagctc
     1981 ggcgagcata tccaaaggcg tcacgaaagt ctgcctcgaa agacatatgg cactcgacta
     2041 ttacgatctt ttgtatgcac ttgaccacac cggagtccgg caattcaagt taccatcgcg
     2101 cccgccacaa atagcgagtg catcgggacg tcggatagcg ggtaagcaag gacgttcagg
     2161 agaggtgggc tgaggcctgc ctgcccctta ttagaattgt gctgcccaca aaatgggcct
     2221 taatgtcgaa caaatgacgc tagaaaagtt ttaagggcgc ggattgcgca gcgtccggct
     2281 cagtaaagag tcggccagcg accgctgtag gttagcggcg ataaaagcgc cggcaagcga
     2341 aggggcaaga acgtgacacc tgctactcct acggcgcgtg gcagaacttg aggcatgata
     2401 tcgtgctgcg atgcattcac tctggggcac ggaggacgaa tccttgtccg cgaatgctga
     2461 agatcatcgg cctctcgccg gcttggtcaa tcctactacg cagtcgcccc atgtgaacgt
     2521 ccacgagatt ggactgcggg acaaacttgt aattccagat ctccttaaaa agcgttgctc
     2581 tcgtcagcac atggcctttg cgccgcatca tgaattcgag cagacagaat tcgcgcggcc
     2641 gcagatcaat cttacgttcg tcgcgtttga cgatgcgtgt caaaaggtcg agctgcaatg
     2701 ggccgacggt caggatcgtt tctcggctct cggtgggttg ccggagcagc tgttctactt
     2761 tggcaagtag atcggcaatg gtggcgagat ttgccgggtt tatgctcgtc ggggtgacgt
     2821 cggtcgccag ccgaaacctg gccgacgggt tctcgagcaa gtcgttgcca aacatcgcgg
     2881 ttctcctgtc caatttcttg cacgggtatg gccttagctg ccttttcctt cttggaagag
     2941 cgtgctgcca ataggatgtc tcagccccgt tctgggactt tccctccttg cttcgtgtgg
     3001 gtgcgcgttc gttgttgttc caaaggcagg cgaaatccaa gcaagccccc tcgcgaacgc
     3061 gcagccgctg acctgcaccg ttatccatga aggaaggtgg agcgcgcacg ccgttcatct
     3121 cggcaagcac gtaccagtat gcgcaggaac gacaaattca acttgggaga cctttggtac
     3181 gcgatctgaa tgcgcagaat cgtcatgcgc ctacgcaaaa aattgtgaaa aagaaaatat
     3241 gaccgcttgg tgctgtcagg gtgctgtcag ccgaaatcgt ggcaggagtc ggtcgagcta
     3301 acccgctgat atcatggtgg gcgctgtagg gattgaacct acgacctctc ccgtgtgaag
     3361 ggaacgctct cccgctgagc taagcgcccg tattcaatgg tgtaatgagt gcccccgggg
     3421 caagtcaagc aagccgccgt gcgctcggca atgtgtctcc acgcgccgta ccgtcgatcc
     3481 aatccggcgc ccgcagcgtg tcagcgtggt ggcgcgggga acgcagcggc ggcggccggc
     3541 gcaggtgtcg gggccggtgt gggtggcggc ttgacggcgc tgatgcgcgg acgcgtcggc
     3601 ggcttcttgt gggcggacgg cggtgccggc tcgagcgccg cgaagatcgg gtcgggcacc
     3661 acgcgcgggc cgacgagcgc gctgctggcg aattcggaat cgccgcgcgg atcgtcgggt
     3721 ggaaacacgc gcgccgacac gctctgcggc aggtagccgt tgagggcgaa attcaccgtg
     3781 aagtccccgg cggcggcgac gttcaacgag cacggcgtgc ggcatccctg tccgcccggc
     3841 gctttcgctt cggcgcccgg cggctcggat tcgacgcgca ccaccgtgtt gatcgtcgag
     3901 ggcttcgagg acatgaaatc catgcttggc acgtaaaatt atccgcaggc ggcaagcgtg
     3961 aggccgaatg ccacaacgac gatagctcgg ctcatagttg taacccgttc acacctgaaa
     4021 cggccgaggg ccgcccatct caccccggcg aggaccatac gaatgcggcg atagccgcgc
     4081 aacggcattg cgcggcatcg ccgcaaaaca tcccggcagg tcacaaatgt ttgtggctgc
     4141 aggactttag cctgggggta tttgagaacc aaatggggaa aagtggcgtc gggcggcgtg
     4201 ccgagcg
//
LOCUS       DATILV010000578         2051 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2950033, whole genome shotgun sequence.
ACCESSION   DATILV010000578 DATILV010000000
VERSION     DATILV010000578.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2051
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2950033"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(267..1136)
                     /locus_tag="VLJ17_13375"
     CDS             complement(267..1136)
                     /locus_tag="VLJ17_13375"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HSV24005.1"
                     /translation="MFAFIAANRRTYAIQMMCALYGVSRGGFYAWQSRQPSARSSQDA
                     RLTERIRTVHAQSRGAYGSPRVARQLRCEGESVGRRRVARLMRGARLQGRSARRYHRS
                     MVRQRAFFASVPNQQWTQVTQAPNQIWVGDVTYLKVAGQWRYLAVVMDRHSRRVLGWS
                     LSARRDAALTRDALRHSVRKRPAAPGLMFHSDRGIEYAAFDYRNQLARLGITQSMNRP
                     GKMNDNAHMESFFHSMKAEDLHGRRFDNEAQLRQALRSYIAFYNQQRLHSALRYLSPA
                     AFERQRSLQPCVN"
     gene            complement(1088..1450)
                     /locus_tag="VLJ17_13380"
     CDS             complement(1088..1450)
                     /locus_tag="VLJ17_13380"
                     /inference="COORDINATES: protein motif:HMM:NF013677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSV24006.1"
                     /translation="MGTPGPQKIHRYGTAFKLKAVQMSNQPGVLVKDVAESLCIHPFM
                     LSRWRKAVRDGALVGKAAPLDAGSVAELQRLREVEQQFKRLQMEHDLLKKAIRFVSER
                     KRKSLRSSRQTGVRTRSK"
     gene            complement(1558..1725)
                     /locus_tag="VLJ17_13385"
     CDS             complement(1558..1725)
                     /locus_tag="VLJ17_13385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24007.1"
                     /translation="MVNYRVADIRALIHELRKEACNVLDKTEESEYGKFGWVIDPEGN
                     KVELWQPPQGQ"
     gene            complement(1719..1943)
                     /locus_tag="VLJ17_13390"
     CDS             complement(1719..1943)
                     /locus_tag="VLJ17_13390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24008.1"
                     /translation="MKRVTGIGGIFFKAKDSVALRTWYQKHLGVDVQDWGGAAFRWAD
                     AEGNPTGGTTIWNVSDASGNTLPQARLRSW"
BASE COUNT          379 a          651 c          602 g          419 t
ORIGIN      
        1 aacgagcccg ctcgctcgaa taccgccacc gcgctgtccg cgggcagctc ggcgacgagt
       61 cgttccatcc gggtcaagaa ctcttgctca ctgtagtcat cgatggatgc ccacaggtca
      121 gatagccgct gttcccattc catgctgttg ctcggtgctg ttccgttcac ccccggcaat
      181 tttacatggt acgggtcagc cggcgtttcc tgcctcggaa gctcgcgagc aagaagccgc
      241 gtaccggcgg gggatcttgc accgctttag ttgacacatg gttgcaggct acgctgccgc
      301 tcgaaggcgg ccggagaaag gtagcgtagg gccgaatgta agcgctgctg gttgtagaac
      361 gcaatgtagc tgcgcagcgc ctggcgcagc tgtgcctcat tgtcgaatcg tctgccgtgg
      421 agatcctcag ccttcatcga gtggaagaac gactccatgt gggcgttatc gttcatcttg
      481 cccggccggt tcatgctctg cgtgatgccc agccgtgcga gctggttgcg gtagtcgaag
      541 gcggcgtact cgatgccccg gtcgctatga aacatcagtc ccggtgccgc gggtcgcttg
      601 cgcaccgaat ggcgtagcgc atcgcgggtc aatgcggcat cacgacgggc gctcaaactc
      661 caccccagga cacggcgcga gtggcggtcc atcaccaccg cgaggtaacg ccactggccg
      721 gcgactttga ggtaggtcac atcacccacc caaatctggt tcggcgcttg cgtcacttgt
      781 gtccactgct gattgggcac gctggcgaag aacgctcgct gtcggaccat cgagcgatgg
      841 tagcgccggg cactgcggcc ttggagccgt gcgccgcgca tcagccgggc cacccgccgc
      901 cgcccaaccg actcgccttc gcagcgcaac tgccgcgcca cacgcggact accataggcg
      961 ccacggcttt gcgcatgaac cgtgcgtatc cgttcggtga gtcgcgcatc ttggctgctg
     1021 cgcgcactgg gttggcgcga ctgccaggcg tagaagccgc cgcggctgac cccatacagc
     1081 gcgcacatca tttggatcgc gtacgtacgc cggtttgccg cgatgaacgc aaagatttcc
     1141 gctttcgctc ggagacaaac cggatagctt tttttagcag gtcatgctcc atctgcagcc
     1201 gcttgaactg ctgctccacc tcccgcagtc gctgcagctc ggccaccgat ccagcatcga
     1261 gcggcgctgc cttgcccacc aacgcgccat cgcgcaccgc cttgcgccag cgcgagagca
     1321 tgaagggatg aatgcacagc gactccgcca cgtccttgac cagaacaccc ggctgattgc
     1381 tcatctgcac cgccttcagc ttgaaagcag ttccgtaccg atggattttc tgcggtcctg
     1441 gtgtacccat tgagcaccct catcgttagg tgaaagtgtc aacaaaaccg attcaaggtc
     1501 cccgtccggt tgagcgcagg gttagacgtc ggttttgtgt tcgatgaagc gtgaaactca
     1561 ttgcccctgg ggaggctgcc agagttcgac tttgttgccc tccggatcaa tgacccaacc
     1621 gaacttgccg tattccgact cctcggtctt gtcgagcaca ttgcaggcct ctttgcgcag
     1681 ctcatgaatg agggcgcgaa tgtctgcgac ccggtaattc accatgaacg aagacgtgct
     1741 tggggcaaag tattgccact ggcgtcggag acgttccaga tcgtagtgcc cccagtcggg
     1801 ttgccctcgg cgtcggccca acgaaatgct gccccgcccc aatcttgaac gtcgacacca
     1861 aggtgctttt ggtaccaggt gcggagtgca acagaatcct tggccttgaa aaagatcccg
     1921 ccgatacccg taactctttt catctgcgcc tccgtagcgt gacagaagac gaagcgtagt
     1981 ggaccgacgc ctaaccgctc atttaggctt cgtcgggatc aggatcgtcg accggcgatg
     2041 cggcgcgtcg g
//
LOCUS       DATILV010000579        10923 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_135937, whole genome shotgun sequence.
ACCESSION   DATILV010000579 DATILV010000000
VERSION     DATILV010000579.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10923)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10923)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10923
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_135937"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..819
                     /locus_tag="VLJ17_13395"
     CDS             <1..819
                     /locus_tag="VLJ17_13395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018457456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSV24009.1"
                     /translation="MGVSLGKNVIIENVAGASGTIGTGRVERAAPDGYTIGIGGWNHY
                     VVNGAIYSLAYDFLRDFEPISQIATGPMLIISRKTVPANDLKEFIAWLKAHPDNLSFG
                     TGGLGSPPHISGLSFEKATGTHFQFVPYRGTAPAMQDLIAGHIDLMFDQASAALAPIL
                     GGSIKAYALTAKTRLASAPDIPTVDEAGLPGFYVSVWHGMWAPRGTPKEIIAKLNTAV
                     VDALADPAVRKRLAEIGQELPSREQQTPAALAAFHRSEIEKWWPIIRAANLKPE"
     gene            complement(923..1780)
                     /locus_tag="VLJ17_13400"
     CDS             complement(923..1780)
                     /locus_tag="VLJ17_13400"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HSV24010.1"
                     /translation="MNKSIIFAIVAMICYGLSDFIYKQAAAAGIRADHFLMAQAWFFC
                     PLVTLYALATGTLVFDPAAIWGSLAGAFIFIGFYYFIRSLAAGSVSTNASIFRLNFVV
                     TVLLVITLLGEQLTPSKIAGLAFALVATWFLVGAGSAADRTPDDAQRYSLVQVAVATL
                     AFGASNFFHTVGLRHGAVPESLAVAQAALFMPLATGVVCFAHGKLALPRVTFKYSATA
                     AIVLLGATIFLLHGVAGGQASVLVPIAQMGFIVAALLGIIILRERVTVRKAIGLVSAL
                     AALAVLALS"
     gene            complement(2032..2337)
                     /locus_tag="VLJ17_13405"
     CDS             complement(2032..2337)
                     /locus_tag="VLJ17_13405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24011.1"
                     /translation="MSFLSARNTPMARRFEIWVPNIIREALVFHSGDCDYTTDLATEY
                     AQYRQSGRYHRVALADWNSSAARRCRRGQVVAAGLSAAMALPFIQVGELKAVAAWYF"
     gene            complement(2744..3760)
                     /locus_tag="VLJ17_13410"
     CDS             complement(2744..3760)
                     /locus_tag="VLJ17_13410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018321605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HSV24012.1"
                     /translation="MQISRRGILGAGATAAAAALTSTTTFGGWEPSERYPDPAIKVLD
                     PSFLKYRVFNASIERLYTGARWSEGPVWFGDARCLLWSDIPNNRILRWDEEIGRTTVF
                     RRPSNYSNGNTRDRQGRLVTCEHDSRRVTRTEYDGTITVLIDKFDGKPLNSPNDIVVK
                     SDNSIWFTDPPPGISGNYEGHVAQQELPTNVYRLDPQTGRATVVVGDIRPNGLCFTPD
                     ERKMYIVDFSNVPRVIRVYDVVDNGTKLANGKAFVTCETAETPDGFRCDTDGNLWCGW
                     GIGEGLDGVVVFNPEGKRIGSISLPERSANVCFGGVKRNRLFMAASHSLYSLYVGAQG
                     AIGG"
     gene            complement(3843..4589)
                     /locus_tag="VLJ17_13415"
     CDS             complement(3843..4589)
                     /locus_tag="VLJ17_13415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24013.1"
                     /translation="MNKSRTPKGESNFNQLVGDYNNPILKPHAAEIVKKRGEISLSGL
                     AFPDPDNQCTYQPVPYIFWNFEIQMLQQPDKITILYNHDHEFREVRMNQPHPAHVTPS
                     AHGDSVGHYEGDTLVIDTVGIKVGPYTMIDRFGTPYTEALHVVERYRLLDYEAAKEAQ
                     ERGQKEWPPVPAYPIDPDYKGKGLQLEFTVEDDGVFTVPWKGTITYRRALRKIWDERI
                     CAENVQEYYAGHQYYSDKDARVPTADKPDF"
     gene            complement(4885..5865)
                     /locus_tag="VLJ17_13420"
     CDS             complement(4885..5865)
                     /locus_tag="VLJ17_13420"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV24014.1"
                     /translation="MRRFPYHSIAVAGILVLLAMGFHTMPASAQASDYPRRAITFMVG
                     FAPGGGIDTFARVVAQELTEQTGISVVIENRAGAASNIAAKAVAGAAPDGYTLLFTGN
                     SFAINQTLYKNPGYATEDLRPVVFVAIDSLALAVHAANPARSLPDFLQAGKTISFNFG
                     FGGSSARIAAEYVFNVLAKANTTGVPFQSGAPALNALLGRHVDIITAPIAEVYPQIEQ
                     GAVRALAVTGPRRAAALADIPTLDELSMPGLGINGWIGILAPARTPDEICAKLNTTVN
                     QIVAKPGVNKRLRGLGYEPYVGAFADAGGFLKRQIDTWGGLIRATGITAE"
     gene            complement(5877..6446)
                     /locus_tag="VLJ17_13425"
     CDS             complement(5877..6446)
                     /locus_tag="VLJ17_13425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSV24015.1"
                     /translation="MMERGDCLKVLACHVADADIVLPVYSTAFDWIEIRPHPLNYLSH
                     GAMGLASSHGLGLALGQPNKRVIVLDGDGSLLMNLGSLVTIAAVAPPNLYHFVCQNGT
                     YEANGGHPIPGRNRIDFAGLARSAGYRMVHEFSDLKTFEQQIGAVLSESGPVFADLKI
                     TSGGPQERDYTRLHGPHVRKAFRDALAAD"
     gene            complement(6458..6994)
                     /locus_tag="VLJ17_13430"
     CDS             complement(6458..6994)
                     /locus_tag="VLJ17_13430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylase"
                     /protein_id="HSV24016.1"
                     /translation="MQQGASADILKPEGLRGSRIIAQIKASRIEFVISVPDITTSEGL
                     LRPLSQATVPRLIRVCKEDEGIGICAGLSYTGLRSLLLIQQTGLLDSINAVRGVAVEY
                     GLPICMMVGLLEKEPGVAPKESRRYGVRIVEPILDAMGITYQEIEADADVAKIKPAID
                     NAYAQSQPVVLLIGTRPS"
     gene            complement(7356..8519)
                     /locus_tag="VLJ17_13435"
     CDS             complement(7356..8519)
                     /locus_tag="VLJ17_13435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013214551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24017.1"
                     /translation="MHRLGWLIAAFLIPPGCGLATDAYAQAPANTAVPPRPTTEYQRK
                     LTAYTQARQKFDDEAGSYWDAVTQKRRLRIAKRRDHQDIVLDDYVLTQPPLYTGPPRP
                     IGPGVPETPPRKYIPVVADFLQSAQEFFDFVPQRPRSEMDFKRAYAKLALAAGLTGEQ
                     IVRIYVFETGGNGTYDAQAGLEYSPHGRAVSPALGYNQLLNTNSVELLAERGDEFVAL
                     LKARAAGSTGEAKRVLERKVDALRRMIKFCRTVPDDWNAHDALANTPQGLGVHAMLLD
                     VDVGPLLQVQKLLESVAFARRKGHHAPLSAAELEMMNLTGDGNGLDIIMMPAAMRERV
                     PTANFFLRAGYERNPVAIRNNVVAKLLAATNATMDRGMDLPGAKELVVAISGR"
     gene            complement(8543..9385)
                     /locus_tag="VLJ17_13440"
     CDS             complement(8543..9385)
                     /locus_tag="VLJ17_13440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24018.1"
                     /translation="MVLSRSAIGAVAVMVALAFAIMEAAAFDETKYPDWSGQWVRPRG
                     IATQWDQGKPSGLGQQAPLTPEYQARLEGSLADQAAGGQGLDTRYKCITNGMPRVMAA
                     IFPLEFVILPSITYVNFEAFMPRRIYTDGRGFPKDEEPSFMGYSLGKWLDTDGDGRFD
                     TLEVETRNFKGPRTVEFTGIALHDDNQTIVKERIYLDKADVETMHNEITIIDHAFTRP
                     WTVDKRYRRIRNVIWYEDNCNENNNHVIIGKDNYFMSGDGYLMPARKGQSPPDLRYFR
                     QTSK"
     gene            complement(9605..>10923)
                     /locus_tag="VLJ17_13445"
     CDS             complement(9605..>10923)
                     /locus_tag="VLJ17_13445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phosphate acyltransferase"
                     /protein_id="HSV24019.1"
                     /translation="DYPNQINNVLGFPYIFRGALDVRATTINMEMKIAAARALADLAR
                     EDVPDDVAAAYGARPKFGPDYIIPVPFDPRLIFAVPPAVAKAAMDTGAARKPIVDMDA
                     YREQLRSRRDPVAGLLSNIFARLRREPKRVVFAEGEEEQVIRAAASFVHQGLGSAILV
                     GREERVRETARNTGIELGEGIEIQNARVSKRTARYAAYLYERLQRKGYLQRDCQRFIN
                     QDRIHFAACMVALGDADATVTGVTRNFSNVLEDVFHCIDAKPGHRVMGVSLLLARGRT
                     IVVADTAVTEMPTAEEIAAIAVEAAAVTRKLGHVPRLALLAFATFGHPPGDRAARVQE
                     AVRILDRQRVDFEYDGEMGADVALNPDLMAAYPFCRLSGPANVLIMPAFHSAAISTKM
                     VQELGGATVIGPLLVGLDRSVQIVGLSAKDTDLVNMAALAAYGISG"
BASE COUNT         2160 a         3312 c         3356 g         2095 t
ORIGIN      
        1 atgggtgtat cgctcggtaa gaacgtcatc atcgagaacg ttgccggcgc atccgggacg
       61 atcggcaccg gccgcgtcga gcgcgcagcg cccgacggct acacgatcgg cattggcggc
      121 tggaaccact atgtggtgaa cggcgcgatc tattcgctcg cttacgattt cctcagggac
      181 tttgagccga tctcgcagat tgcgaccggc ccgatgctga tcatctcacg caagacagtg
      241 ccggcgaacg atctcaagga attcatcgcc tggctcaagg cccatccgga caacctgtcg
      301 ttcggcaccg gcgggctcgg cagtccacct cacatcagcg gcctttcgtt tgagaaggcg
      361 accggcacgc actttcaatt cgtgccctac cgtggcacgg caccagccat gcaggatttg
      421 atagcaggtc atattgacct gatgttcgac caggcctcgg cggcgctcgc cccaatcttg
      481 ggtggcagca tcaaggccta tgcgctaaca gctaagacca ggctggcctc ggcgcccgat
      541 atcccgaccg tcgacgaggc ggggttaccg ggcttctacg tgtcggtatg gcacggaatg
      601 tgggctccca gaggaacccc gaaggagatc attgccaagc tcaataccgc tgtggtggat
      661 gcgcttgcgg acccggcagt gcgcaaacgc ctcgccgaga tcggacagga attgccgtcg
      721 cgggagcagc agacgccggc ggcgcttgcc gcctttcaca ggtccgaaat cgagaaatgg
      781 tggccgatca ttcgagctgc caacctcaag ccggagtgag aggatcaagt cgattgcggt
      841 gttcaccacg ttcgactgtt tctcgcgcgg tgttttagtc cttggtcccc tgtgggacgc
      901 tatctgctac taagatcagc tctcaactta gcgccagcac tgccaaggca gctagcgccg
      961 aaacgagacc gattgctttg cggactgtga cgcgctcacg aagaataata atcccgagca
     1021 atgcagcgac aatgaacccc atctgcgcga tcggcacaag cacgctcgct tggccaccag
     1081 ccaccccatg cagcaggaaa atagtggcgc cgagcagcac gatcgcggca gtagcgctgt
     1141 acttaaacgt cacccgcggc agcgccagct taccgtgcgc gaaacataca acgccggtcg
     1201 caagcggcat gaacagagct gcctgggcaa ccgcaagcga ttccggaacg gcgccatgcc
     1261 gcagcccgac ggtgtggaag aaattcgacg cgccgaacgc gagtgttgcg acagcgacct
     1321 gtacgagcga gtaccgctgt gcgtcgtcgg gcgtgcgatc ggcggcgctt ccagcgccta
     1381 ccaggaacca cgtcgcaact agggcgaatg cgagccccgc tatcttgctg ggcgtcagct
     1441 gttcgccgag caaggttatc accagcagca cggtgacgac gaagttcagg cggaaaatcg
     1501 acgcgttggt gctgaccgag ccggcggcaa ggctgcggat gaaataatag aagccgatga
     1561 agatgaacgc gcccgcgagc gatccccata tcgccgctgg atcaaaaacg agcgtgccgg
     1621 tcgcgagtgc atatagagtg acgagcgggc agaagaacca cgcctgggcc atcagaaaat
     1681 ggtcggcccg gatgcccgcg gcggcggcct gcttgtagat aaaatccgag agcccgtagc
     1741 agatcatcgc cacaatggcg aagatgattg atttgttcat aaaggtctaa tggctcagat
     1801 ggacaagagg acgcgtaacc tcatctacga cagatgcccc cgattcggaa aatgcgaagg
     1861 gccgtgccga cgacagtgtt gcgcgcgcca atgaacgtct gggacgcgat cagcagacac
     1921 cagcggcact tgctgctgtt gacagatccg tggtcgagaa atggtggccg aaatccgaaa
     1981 gcgagaagcg gtggccgctc attcgagccg ccaacctcaa accgaagtga gctaaaaata
     2041 ccaggcggcc acggccttta attcacctac ttgaatgaac gggagcgcca tcgcggcact
     2101 aagcccggcg gccaccacct gtcctctgcg acaccgtcgc gcagcgctgg aattccagtc
     2161 agccaaggct acccgatgat accgtccgct ttggcgatac tgtgcatatt cggttgcgag
     2221 gtcggtggtg taatcacaat cgcctgaatg aaacacgagc gcctcgcgga ttatgttcgg
     2281 aacccagatt tcgaagcggc gtgccatcgg cgtgttgcgc gcagagagga agctcaaagg
     2341 tctgcccgga ctcatgagca cagggtatgc cgaggccgcg attgatgccg atctgcgccg
     2401 cctgctccca cgcagaaacg aattcgaagc tcttttacga tcggcggcgt tcgggattcc
     2461 aggcccgccc gggcaacccg gagccgcggg gaaacctggc gtaacgcgca ttaaatccaa
     2521 aggtcggggc atttgcataa tgaccgccga cgatcaattg gtctcagtgg cggagttttg
     2581 caaccaagac aaggaaataa gcggccgatt gctcattcgg cgggcattgc ccattggggc
     2641 tgcgcgcgcc agggtgtgcg cgcaggggac ctgaaacaag cgacccactc gccttagcgg
     2701 gcgccggcgg ccgggcgggc gcaacaccgt cgagcagccg ccgtcaccct ccgatcgcgc
     2761 cctgggcgcc gacgtatagt gaatagagcg agtggcttgc cgccataaac aagcggttgc
     2821 gcttgacgcc gccaaagcag acattggcgc tccgctccgg aagcgagatt gaaccgatgc
     2881 gcttgccttc tggattaaat actacgacgc catcgagccc ttcgccgatg ccccagccgc
     2941 accacagatt gccgtccgtg tcgcagcgga agccatccgg tgtttcggcc gtttcacagg
     3001 tcacgaacgc cttgccgttg gcgagcttgg tgccgttgtc gacgacatcg tagacccgga
     3061 ttacgcgtgg cacattgctg aagtcgacga tatacatttt ccgctcgtcc ggcgtgaagc
     3121 acagcccgtt cggccggatg tcgccaacca ctaccgtggc gcgtccggtt tgcggatcga
     3181 ggcggtacac attggtcggc agttcctgct gagcgacgtg accttcatag ttgccggaga
     3241 tgccgggggg cggatcggtg aaccagatcg agttatcgga tttgaccaca atgtcgttgg
     3301 gcgagttgag cggcttgccg tcgaacttgt cgatcagcac cgtgatggtg ccgtcatatt
     3361 cggtgcgcgt cacgcgccgg ctgtcgtgct cgcaggtgac gagacggccc tgacggtcgc
     3421 gggtattgcc gttcgaatag ttcgacggcc ggcggaacac ggtggtgcga ccaatctcct
     3481 cgtcccaccg caggatgcgg ttgttcggaa tgtcgctcca cagtaagcag cgggcatcgc
     3541 caaaccagac cggcccctcg ctccagcgcg cgccagtgta aagccgttcg atgctggcgt
     3601 tgaaaacgcg atacttcaga aagctcgggt cgagcacctt gatggccggg tccgggtagc
     3661 gctcgctcgg ctcccatccg ccaaatgtcg tagtcgacgt cagtgcggcc gcagcggcgg
     3721 tcgcccccgc ccctagaata ccgcgtcgtg aaatctgcat ggcgttcctc ctatcatgac
     3781 acgatcgcga ttgatcgtgt gcccctttct tgacccgaac ctaccgcgac caagacgacc
     3841 aatcagaaat ccggcttgtc ggcagtcggc accctggcgt ccttgtcgga gtaatattgg
     3901 tgcccggcat agtattcctg cacattttct gcacagatac gttcatccca tattttgcgc
     3961 agggcacgcc gataagtgat ggtccccttc cacggcaccg tgaacacgcc gtcatcctcg
     4021 acggtgaact cgagctgcaa tcccttgccc ttgtagtcgg gatcgatcgg ataagccggg
     4081 acgggaggcc attctttttg gccccgttct tgtgcttctt tcgcggcttc gtaatcaagc
     4141 aggcggtaac gctcgacgac atgcagggcc tcggtgtacg gggtgccaaa gcggtcgatc
     4201 atcgtgtagg gcccgacctt gatccccacc gtgtcgatca ccagcgtgtc gccttcgtaa
     4261 tggccaacgg aatccccgtg cgctgacggc gtcacatgtg ccggatgagg ctggttcatg
     4321 cgcacttcgc ggaattcatg gtcgtggtta taaaggatgg tgatcttgtc cggctgctgg
     4381 agcatctgga tttcaaagtt ccaaaaaata taaggcacgg gctggtacgt gcactggtta
     4441 tcgggatccg gaaaggccag gccggataac gagatttcac cgcgcttctt gacgatctcc
     4501 gccgcatggg gcttcaagat cggattgttg taatcgccga ccagctgatt gaagttgctc
     4561 tcgcctttag gtgtacgcga cttgttcact accgggccgg gacctgatac cggcgactca
     4621 aatccgagag acgggtgtgc ccaaatgaag ggagaaaaat ccggaacgga tgcggcgctt
     4681 gatgtggcgc tgctggccgg ccccgctgag ggcgccgccg cttgccccca cgccggcgtc
     4741 gcagcagctc ccgccaatgt caccactaaa aggaaatccc gccgctgcac attcatgctc
     4801 ccctcccttt gaaggtttcc ggcagccctt ggataaaagc tatacctttt gcgtgcgcgc
     4861 cgggaagggt gcgcgatggc gtgctcattc agccgtgata ccggtggcgc ggatcagccc
     4921 gccccaagtg tcgatctggc gcttgagaaa tccgccggca tccgcgaacg ctcccacata
     4981 gggctcgtag ccgagtccgc gcaggcgctt gttgacgccg ggcttggcaa cgatctggtt
     5041 caccgttgta ttcaacttgg cgcatatttc gtcaggcgtc cgggcgggcg ccaggatgcc
     5101 gatccatccg ttgatgccga gacccggcat gctgagttca tccagcgtcg gaatgtctgc
     5161 aagcgccgca gctcgtcgcg gacccgtgac ggcgagcgcc cgcacggcac cctgctcaat
     5221 ctgcggatac acttcggcga tcggcgccgt gatgatgtcc acatgacggc cgagcagggc
     5281 gttgagcgcc ggcgcgccac tttggaacgg cacaccggtg gtattcgcct tggccaggac
     5341 gttgaaaaca tattcggccg cgatgcgggc cgacgagccg ccgaaaccaa agttaaagga
     5401 aatggttttg ccggcctgaa gaaaatccgg caggctgcgg gccggattgg cggcatggac
     5461 ggcgagcgcc aagctgtcga ttgccacgaa caccacaggc cgtaaatcct cggtggcgta
     5521 gccggggttc ttgtagagcg tttggttgat ggcgaaactg ttgccggtaa acagcagcgt
     5581 gtagccgtcg ggcgccgcgc cggcgaccgc cttagcggcg atattcgaag ccgcgcccgc
     5641 acggttctcg atcacgaccg aaatcccggt ttgctcggtc aactcctggg ccaccacgcg
     5701 cgcaaacgta tcgatgccgc cgcccggcgc aaaaccgacc atgaaggtga tagcgcggcg
     5761 cggatagtcc gatgcttgag cactcgccgg catcgtatga aatcccatgg ccagcagcac
     5821 caaaatgccg gcgaccgcaa tgctgtggta gggaaatcgc cgcatggtgc ccccgttcag
     5881 tccgccgcca acgcgtcgcg gaacgccttg cgcacgtggg gaccatgcag acgggtgtag
     5941 tcgcgctcct gcggaccgcc ggacgtaatc ttgagatcgg cgaacaccgg tcccgactcg
     6001 gacaacacgg cgccgatctg ctgctcgaat gttttcagat cggaaaattc atgcaccatg
     6061 cggtagcccg ctgatcgcgc gaggccagcg aaatctatcc gattgcggcc cgggatcggg
     6121 tggccgccat tcgcctcgta ggtgccgttc tggcacacga agtgatagag attgggcggc
     6181 gccacggccg cgatcgtcac caggctgccg aggttcatga gcaggctgcc gtcgccgtcg
     6241 agcacgatga cgcgcttgtt gggctgcccc aacgcaagcc cgaggccgtg agacgacgcc
     6301 aagcccatgg cgccatggga caagtagttg agtggatgcg gcctgatttc aatccaatcg
     6361 aaggcggtcg aataaaccgg cagcacgata tcggcatcgg cgacgtggca cgccagaacc
     6421 ttgaggcaat cgccgcgctc catcatgacg atctccctca agatggcctt gtgccgatga
     6481 gcagaacgac cggctggctt tgcgcatagg cattgtcaat cgccggctta attttcgcca
     6541 cgtcggcatc cgcttctatc tcctgatacg tgatgcccat ggcatcgagg atgggctcga
     6601 caatgcgcac gccgtagcgc cgggattctt tcggcgctac gccgggctct ttttccaaca
     6661 ggccgaccat catacagatc ggcaacccgt attccactgc aacgccgcgc accgcattga
     6721 tggagtcgag aagtccggtc tgctgaatca acagcagcga tcgtagcccc gtatacgaca
     6781 gcccggcaca gatcccgatg ccttcgtctt ctttgcagac gcggatgagg cgcggcaccg
     6841 tggcctgaga gagtggacga agcaggccct cactggtggt gatgtccgga accgaaatga
     6901 cgaattcgat tcggcttgcc ttgatttggg caatgatgcg gctgccccga aggccctccg
     6961 gtttaaggat atcggcactt gctccctgct gcattgcgtt tcctcgccga catcctcaaa
     7021 gctttggtct taggcaatcg aaataccgta atcgtagtcc agaccgcgga atgcgcaatc
     7081 caggaatgat cgatttgcat gcccgtattc tccctgtcgg tgagcagggt tcgttcatgc
     7141 aatgcggaca aaaagccccg gccgtggggg gggggtcggc cggggcgtaa aagccctcgc
     7201 gcaagtgggg aggatgacaa gcgcgtaatt tatgggctct gctaatgagt tggggatgac
     7261 gcggcgttcc gaaaagtgac cggatgccgc atcgcgagct accatgggtc gcggtacttc
     7321 gcgtgcacgc ctggagcatc tgcgatttga agagatcacc gccctgagat ggcgaccacg
     7381 agttccttcg cgcccggaag gtccatcccg cgatccatcg tggcgttggt cgccgccagc
     7441 aacttggcaa ccacgttgtt gcggatggcg accgggttgc gctcgtaacc ggcccgcaga
     7501 aaaaaattcg ccgtcggcac ccgctcccgc atggcagccg gcatcatgat gatatccaga
     7561 ccattgccgt caccggtgag attcatcatt tcaagctcgg cagcgctcaa aggggcatgg
     7621 tgccccttgc ggcgggcgaa agccacggat tccagtagtt tctggacctg cagcagcggg
     7681 ccgacgtcca cgtccagcag catggcgtga accccgaggc cttgcggcgt gttggcgagg
     7741 gcgtcatgcg cgttccaatc atctggaacg gtgcgacaga atttgatcat ccgtcgtaat
     7801 gcgtcaacct tgcgctctaa aactcgctta gcttcgccag tcgacccggc ggcgcgcgct
     7861 ttaagtaggg cgacgaattc gtcgcctcgt tcggccagaa gctcgaccga gttggtgttc
     7921 agaagctggt tgtagcccag cgccggcgat acggcgcgcc catggggcga atattccagt
     7981 cccgcctggg cgtcataggt gccgttgcca ccggtctcga acacgtaaat gcgaacgatc
     8041 tgctccccgg taaggcctgc cgcgagggct agttttgcgt aggcacgctt gaagtccatt
     8101 tcgctgcgcg gccgttgcgg cacgaagtcg aaaaactctt gtgccgattg aaggaaatcc
     8161 gccacgacgg gaatgtattt ccgcggcggg gtctcgggaa ctcccgggcc gatcggcctt
     8221 ggcggacccg tataaagtgg cggttgggtc agcacgtagt cgtcgaggac aatgtcctgg
     8281 tgatcgcggc gcttcgcgat tcgcaggcgt cgcttttgcg tcaccgcgtc ccaatagcta
     8341 ccggcttcat cgtcgaattt ctggcgcgcc tgcgtgtaag ctgtgagctt gcgctggtat
     8401 tcggtggtcg ggcgcggagg cacagccgtg ttggcgggcg cttgcgcata ggcgtcagtt
     8461 gcgagcccgc atcccggcgg tatcaggaat gcggcgatca gccatcctag gcggtgcatg
     8521 acgcgcgtcc gcaacgcgcg cgttattttg aggtctgcct gaaatagcgc aggtcgggcg
     8581 gcgactggcc tttgcgcgcc ggcatcagat agccgtcccc gctcatgaaa tagttgtcct
     8641 tgccgatgat cacatgattg ttattctcgt tgcagttgtc ctcataccag ataacgttgc
     8701 ggattcgacg atagcgcttg tccaccgtcc acggccgcgt gaaggcatgg tcgatgatgg
     8761 taatctcgtt gtgcatggtt tcgacgtcgg ctttgtcgag atagatccgc tccttcacga
     8821 tcgtctgatt atcgtcatgc agcgcaatgc cggtgaattc cacagtgcgc ggtcccttga
     8881 agttgcgggt ttcgacctca agcgtatcga agcgcccatc tccgtcggtg tcgagccatt
     8941 tgccgagtga ataacccatg aagctcggct cttcgtcctt ggggaaaccg cggccgtccg
     9001 tatagatacg gcgcggcatg aaggcctcaa aattcacgta ggtgatgctg ggcaggatga
     9061 cgaactcgag cgggaagatt gccgccatga cccgcggcat gccgttggtg atacatttgt
     9121 acctggtgtc gaggccttgg ccgccggccg cctggtcggc caggcttcct tccagccggg
     9181 cctgatactc gggcgtcagc ggggcctgct gcccgaggcc cgacggctta ccctgatccc
     9241 attgggttgc gatgccgcgc ggccgtaccc attgccctga ccaatcggga tatttcgttt
     9301 cgtcgaaggc tgcggcctcc ataatcgcaa atgccagcgc caccatcacg gcgaccgcgc
     9361 caatcgcgct tcgagaaagc accatattcc tcccccgacg ttttccggcg gctcgcgccc
     9421 gtacgcgggg cgaccttgta ttggcgccag actacacggt ttgtcgcaag gtacggaagg
     9481 ggcgggcacg tcccgaccct cccctaaggg gctccggaaa gagggggcag gacggtggga
     9541 ggtcacttcg tcctacgtca cgacaaaccg tgccgctcag cgccgctgcg ggagaaggcc
     9601 tagatcaccc actgatacca taggccgcga gcgccgccat gttgacgaga tcggtgtcct
     9661 ttgcggatag accaacgatc tgcactgagc gatcgaggcc caccaacagc ggcccgatca
     9721 cggtggcgcc gccaagctcc tggaccattt tggtggagat cgcggctgag tgaaatgctg
     9781 gcatgatcag cacgttggca gggccagaca ggcggcagaa cggataggcg gccatcaggt
     9841 ccggattgag ggcgacatcc gcccccattt caccatcgta ttcaaaatcg acgcgctgcc
     9901 gatcgagaat gcgcaccgcc tcctgcaccc gcgcggcgcg gtcgccgggc ggatgcccaa
     9961 aggttgcaaa tgccagcaat gcgagacgcg gaacatgacc gagcttgcgc gtcacagccg
    10021 ccgcctcgac cgctatggcg gcaatctcct ctgctgtcgg catttcagtt accgcggtat
    10081 ccgcgaccac gatggtgcgg ccccgggcga gcaggagcga cacccccatc acccggtgcc
    10141 cgggcttggc atcgatgcaa tgaaacacat cctcgagcac gttggagaaa ttccgagtca
    10201 cgccggtcac ggttgcgtcc gcgtcgccga gtgccaccat gcaggcggca aaatgaatgc
    10261 gatcctggtt gatgaaacgc tggcaatcgc gctggagata acctttgcgt tgcaggcgtt
    10321 cgtagagata ggccgcgtat cgggcggtgc gcttcgacac acgggcattc tggatctcga
    10381 tcccttcgcc aagttcgatg ccggtattcc gggcggtttc gcgaacacgt tcctctcgtc
    10441 caaccagaat ggcgctgcca agtccttgat gcacaaagct cgcggcggcc cggatgacct
    10501 gttcctcctc gccctctgcg aacacgacac gcttcggctc ccgccgcagc cgcgcaaaga
    10561 tgtttgacag caatcccgct acgggatcgc ggcgcgaacg caattgctcg cgataggcgt
    10621 ccatatcgac gatcggcttg cgggccgcgc cggtgtccat agccgccttg gcgaccgccg
    10681 gcggcaccgc gaagatgagg cgcggatcga acggcaccgg aataatgtaa tcaggaccga
    10741 atttcggccg cgccccatag gcagccgcga catcgtccgg cacgtcctcg cgggcgagat
    10801 cggccaacgc ccgtgcggcg gcaatcttca tctccatatt gatggtggta gcgcgcacat
    10861 cgagggcgcc gcggaagata tacggaaatc cgagcacatt gttgatctgg ttcggatagt
    10921 cgg
//
LOCUS       DATILV010000580        10930 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1159314, whole genome shotgun sequence.
ACCESSION   DATILV010000580 DATILV010000000
VERSION     DATILV010000580.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10930)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10930)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10930
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1159314"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1268
                     /locus_tag="VLJ17_13450"
     CDS             <1..1268
                     /locus_tag="VLJ17_13450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24020.1"
                     /translation="ASAISQVGTFLNNPVPPACGHPIPTLFASFIQPGAVLDPNRILV
                     GSRSNFGAPLAVGVGSEGSFLSIDPSGPAVLRIPRNFAQSGDQASALGGTVQMFSANS
                     PYWVNAVGSATAAFTGVSNPLGLSNNNAFGRLWPANKAQFGDAEFGSSTILDPTGKPL
                     ASAPNPVIGGVYVGSRTNRDVVAVPPQPQVISGSLSAGAVGTAFLGPSPDGTCKAVFA
                     VVTADGAIVQEHTLKGLDGLAAAGTVDPLLGQSLAFLNRGVEPRLGVLMNPYTDPDPA
                     KRGVPQLFVSEPFNNTIAVINLAVFGTAPNQVFGVNSVRRISSPSLRLPVDIAAVNRD
                     ADSMKWASNTTLDEGSDFYVANRGNNTIVRMRQDGTVVAVRRVTIDGDPLDDANLNGI
                     TTSTDGTTIYVTFTSREDIQGGVLALPAF"
     gene            1420..1632
                     /locus_tag="VLJ17_13455"
     CDS             1420..1632
                     /locus_tag="VLJ17_13455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24021.1"
                     /translation="MSAGNSIGGGWLGAALMLMSGGAGAFDDANYPDLKGQWDRMAVT
                     AGARSFDETVRSSLARCSFSLPLGKF"
     gene            1857..2774
                     /locus_tag="VLJ17_13460"
     CDS             1857..2774
                     /locus_tag="VLJ17_13460"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSV24022.1"
                     /translation="MKWITIAALAGTAGLLAGAASAQQGVDFSKVEIKTTDLGNKTYM
                     LEGQGGNITVAVGTDGIIMVDSQFAPLHDKIKAAIEKISPLPIKYLINTHYHGDHVGG
                     NAAFHRDGATIVAHDNIRVRLVAGTTNALTGNKVPPVEADAVPTETYQVGGMKVEVGG
                     RVAQISHVITAHTDGDSWVYFPDANVLALGDTFTRNYPNLDWGNGGTMDGMILANERY
                     LKTANDTTKVVPGHGPLATRANIQEFHDMLVTARDRVKKLFEEGKSEQEVLAAKPLAD
                     LDTKWGAAQGLGTPTIFLRNVYNSFRNHN"
     gene            2844..3812
                     /locus_tag="VLJ17_13465"
     CDS             2844..3812
                     /locus_tag="VLJ17_13465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSV24023.1"
                     /translation="MAKFMSALAIAVSLSGVASAQPYPSRPITLAMPFAAGGPGDTLA
                     RIVAEHMKESLGQTVIVENVTGAAGSIGAGRVARAAPDGYTLVLGNWATHVVNGVVYA
                     LAYDVVKDFEPVSLVATQPILIVAKKTMPADDLQGLIAWLKTHPDKASAGNAGIGSST
                     YVTSIFFQMQTGTRFQLVPYRGGALAMQDLLAGQIDLLFDLVANALPQVRAGTIKPYA
                     VTANVRTAVAPDIPTVDEAGLPGLHVALWNAMWAPRETPKTIIAKLNSAIVEALADPA
                     VRSRLADLGHEFFPRDQMTPQALAAFQKAEIAKWWPIIKAANIKGE"
     gene            4506..6035
                     /locus_tag="VLJ17_13470"
     CDS             4506..6035
                     /locus_tag="VLJ17_13470"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011442323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Do family serine endopeptidase"
                     /protein_id="HSV24024.1"
                     /translation="MTRNNAPGSKFLALRRAVLLASVTGVGIAALAGGMGLQTQTKSP
                     TWIASAAAAETAAQPRGFADLVEKVKPAVISVRVQFDKTAQRTNDDEMTPFRQGSPFE
                     RFFRQFGFEDMPNGMQNRQFGMPQIPRTAAEGSGFFISADGYAVTNNHVVNNAKTVQV
                     ITDDGKTLAAKVIGTDPNTDLALIKVDGNNFAFVNFADHDPRIGDWVVAVGNPFGLGG
                     TVTAGVVSARGRNLGSGANDFIQIDAPINRGNSGGPTFDLDGNVIGVNTAIYSPSGGS
                     VGIGFDIPADTAKMVVAQLRDKGHVTRGWLGVRIQPVTADIADSLGLKKAAGALVDEP
                     QSGSPAGKAGILAGDVITAVDDHDVKDSRDLARQIGAMAPGTSAKLSVWRKGEAKTVT
                     LTIGELSDQRQANADQQGTPDTTGTPRLGLTLAPASDVGGAGNQGVAVMAVDPNGPAA
                     EHGIKTGDVILDIAGKTVSKPEDVREELANLHKDGKHSVLIHLKSGAATRFVAVPFAK
                     A"
     gene            6273..7127
                     /locus_tag="VLJ17_13475"
     CDS             6273..7127
                     /locus_tag="VLJ17_13475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24025.1"
                     /translation="MSNGNAIAGGLLGAGLMLLSGGTWAFDDANYPDLKGQWNRVVVP
                     GVAPSFDPTKRPGVAQQAPLTPEYQKILEASLADQAAGGGGFAPDYLCISSGMPMRMT
                     AYTPLEIIVTADTTHITGPDGYMHRRIYTDGRDWPEEVEPSRIGYSVGRWIDEDADGK
                     FDTLVVETRYFRGQRAFDQTGIPLHEDNQTIVKERIYLDKSDRNVLHDEITVFDHALT
                     RPWTVTKNYVRDPSSRPVWIAWDCAEGNPHVRIGNEDYMVGGDGLLMPAKKGQRPPDL
                     RYFNETRK"
     gene            complement(7132..8412)
                     /locus_tag="VLJ17_13480"
     CDS             complement(7132..8412)
                     /locus_tag="VLJ17_13480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009025526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase/deacetylase family
                     metallohydrolase"
                     /protein_id="HSV24026.1"
                     /translation="MMHITRRRMLATVGSLALSAASGPAFTAMGPDDKFDLVIKGGEV
                     LDPSQSLRGRRDIGIRYGMIEAVAPDIPATRALRQIDAGGKLVTPGLVDLHCHVYPYG
                     SAIGIPADELVAHQCTTTCVSAGDAGANNFAGFRRFIVAQTRTRLYAFVHIANIGLTP
                     FPLPELYNIDFAQVDACAKAVAENADIAIGVKVRMSENVIARNGAEPLKRAIQACEMA
                     GTGGRVMAHIGGVENVALMTEILDLLRPGDILTHSYSGAPNLTGAFTNIVQDGRLLPA
                     ALAAKRRGVMFDVGHGGGSFDYTVAEAAIAQGAPPDTISSDIHVVSGNTPGMPYLTWV
                     MSKFLGLGFTLEQVVAMATINPAKIINRTPKLGTLQIGAPGDIAIMELVEGPVSFVDT
                     RNNTRNGRAYLKPVQTVTGGVAFGRPYALPFSVR"
     gene            8716..10386
                     /locus_tag="VLJ17_13485"
     CDS             8716..10386
                     /locus_tag="VLJ17_13485"
                     /inference="COORDINATES: protein motif:HMM:NF017081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV24027.1"
                     /translation="MRSSLPETSLLSHTSGHVSKWVIAAMCLAAYVILAWVSFIHVHK
                     GLPVTPWDPGLGVVFALMVLAGPRAGLVLLAGVIIAEVLVLQNEVDWPVVIGIGAITS
                     LSYTSVTVFARLHLQIDVGLFHLRDVLLLLVVGLAGAVIDTVLLTVFLFAVGQLNVRD
                     VVQVFSPLLIGDMIGIAVVTPLLLRFVFRQRSVGLHQLLSIAPEGALYLVVIGAALWA
                     IISSENLYGFRLFYLLFMPVVIAAVRHGLDGACFSLAATQFGLIGLLHLSGYNAAEFT
                     EFQVLMLVLTVTGLIVGVVVSERENSDRLARDAQARLMERQAGAAHAARLNLVSGMAS
                     ALAHEINQPLTAARALARSVQHLLGTPGADLTRAGNNLTALLAHIDHAGAIVRRMRDF
                     IRRGGPHVSTIDTRKMLEQALTLAFAEASAKHVRLDLDAPDSLPVIHGDRVQLEQVVL
                     NLVHNAVEAIVGTGRSEGHIRVVARHHTAPPRVEIGVLDNGPGVEDQLAVRLFDPLAT
                     SKQDGLGLGLSISASIVEAHGGRVWLHCREAGATEFRFSVPLVQSKVL"
     gene            10383..>10930
                     /locus_tag="VLJ17_13490"
     CDS             10383..>10930
                     /locus_tag="VLJ17_13490"
                     /inference="COORDINATES: protein motif:HMM:NF018228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV24028.1"
                     /translation="MTMPSPTIFVIDDHAAVRAALGEMLSVFGYTVETYESADSFLEA
                     IDQQNSGCIVADVKMPGTDGIGLVRELARRNVALPVVLISGHADVPMAVAAIKSGAED
                     FIEKPVDDAQLVAAINRALARRFDQQDLHNAQRALGDKFARLTPRQVEIFDFVVEGFT
                     SHAISAKLNISVRTVESYRAEV"
BASE COUNT         2125 a         3282 c         3364 g         2159 t
ORIGIN      
        1 gcgcttcggc tatctcgcaa gttggtacat ttcttaacaa tccagtcccg cctgcgtgcg
       61 gccatccaat acccacgctg tttgcctcat tcatacagcc aggcgcagtg ctggatccga
      121 atcggatcct ggtcggcagt cggtcgaact tcggcgcccc gctggccgtg ggcgtcgggt
      181 cggagggctc gttcctgtcg atcgacccga gtgggcccgc tgtcctgaga atcccccgga
      241 atttcgcgca gagcggcgat caagcctcgg ccctcggcgg cacggtgcag atgttcagcg
      301 cgaacagccc atactgggtc aatgccgtcg gctccgccac cgccgcgttc accggggtga
      361 gcaatcctct cggcctgtcc aacaacaacg cctttggccg cctttggccg gcgaacaaag
      421 cacagtttgg cgacgccgag ttcggttcat ccacgatcct cgatccaacc ggaaagccgt
      481 tggccagcgc ccccaacccc gtcatcggcg gggtctatgt gggcagccgc acaaatcgcg
      541 atgtcgtggc tgtgccgccg caaccgcagg tcatttctgg ctcgctgagc gcgggcgctg
      601 tgggcacagc cttcctcggc ccgtcgccgg atggcacctg caaggcggtg tttgctgtgg
      661 tcaccgccga tggcgccatc gtccaggagc acaccctcaa aggcctggac ggtctggcgg
      721 cggcaggcac cgttgacccg ctgctcggtc agagcttggc ttttctgaat cgcggtgtcg
      781 aacctcggct cggcgtgctc atgaatccgt acaccgatcc ggatccggcc aagagggggg
      841 tgccgcaact gtttgtgagc gagccgttca acaacacgat tgccgtcatc aacctcgccg
      901 tcttcggaac cgccccgaac caagtctttg gtgtgaattc ggtcaggcgc atcagttcgc
      961 cttcattgag gctgccggtc gacattgcgg ccgttaacag ggacgcagat agtatgaagt
     1021 gggcgagcaa cacgaccctg gacgaaggct cggacttcta tgtcgccaat cgaggtaaca
     1081 acacgatcgt ccgcatgagg caggatggca ccgtggttgc ggttcgccga gtcactatcg
     1141 acggcgaccc gttggatgat gcgaacctca acggcataac gacctcgacg gatggcacca
     1201 cgatttatgt gacattcaca agtcgggagg acattcaggg aggtgttctc gccctgccgg
     1261 cgttttgatc ttcggggcac ctcggaggtg tcatgaagca aaatgaccga agtcggtagc
     1321 agccgacttc ggttggggga gaggagtaaa agtttcgcct tccttcgctg gtgccggcgc
     1381 aggtctagcc gtgcggcatg atgttcccgg ggggacatca tgtcagccgg aaattcgatt
     1441 ggcggcggtt ggttaggagc ggcgctgatg ctcatgtccg gcggcgcagg ggcgttcgat
     1501 gacgccaact atcccgacct gaaaggccaa tgggatcgca tggcggtcac cgcaggcgcg
     1561 aggtcgttcg acgaaaccgt gcgttccagc ctcgcgagat gttctttttc tttgccgttg
     1621 ggcaaatttt agagtcgaga gaggcggccc ggctcatttg cgtcgttcag gaggagccct
     1681 caattccgga ttcctctctt ccgtgccgaa ggcaccgtgg tgtagcctcc tctgcgccgg
     1741 tttgctcgcg ccgcgagggg ctattgtcgc aactgccgga atgccgagcc cggatcgatc
     1801 ggttcggacg cgccaactga gccaaatcag ttgtcgtcct cacgggagga tcaatcatga
     1861 agtggatcac gattgctgca ttggccggca ccgccggatt gctcgcaggc gcagccagtg
     1921 cgcagcaagg cgttgatttc tcgaaggtcg agatcaagac caccgatctc ggcaacaaga
     1981 cctacatgct ggaaggacag ggcggcaaca tcacggtcgc ggtcggcacc gacggcatta
     2041 tcatggtgga cagccaattt gcgccgctcc acgacaagat caaagccgca atcgagaaga
     2101 tttcgccgct gccgatcaag tacctcatca atacgcacta ccatggcgat cacgtcggcg
     2161 ggaatgcggc cttccacagg gacggcgcaa ccatcgtggc gcatgacaat atccgggttc
     2221 gcctcgttgc cggcactacc aacgcattga ccggcaacaa ggtcccgccc gtcgaggcag
     2281 acgcagtccc caccgagacg tatcaggtcg gcggcatgaa agtcgaggtt ggcggccgcg
     2341 tcgcgcagat cagccatgtg attacagccc acaccgacgg cgacagctgg gtctacttcc
     2401 cggatgccaa cgtgctcgcg ctcggcgaca cgttcaccag gaactatccc aatctcgact
     2461 ggggcaacgg cggcacgatg gacggcatga tccttgccaa cgaaagatac ctcaagacgg
     2521 caaacgacac gaccaaggtc gtgcccggtc atggcccgct cgcaaccagg gccaacatac
     2581 aggaattcca tgacatgctg gtcactgcgc gagatcgggt caagaagctg ttcgaggagg
     2641 gaaagagcga acaggaggtg ctcgcggcca agccactagc tgatctcgat acgaaatggg
     2701 gcgctgctca gggccttgga acgccaacca tctttctgcg caacgtttac aactcgttcc
     2761 gcaatcacaa ttgatcgtag ccagcgatct gcgcacatcc gcgcggcgat tgtatcgcgc
     2821 gtcacgatcc cggagcggaa gacatggcaa aattcatgtc cgcactcgca attgcggtga
     2881 gcttatcggg cgtcgcaagc gcgcagccct atccgtcgcg gccgatcacg ctagccatgc
     2941 cgttcgcggc tggcggcccg ggggatacgc tggctcgtat cgtggccgag cacatgaagg
     3001 agtcgctcgg gcagaccgtt atcgtagaaa acgtgaccgg ggccgcgggc agcatcggcg
     3061 ccggccgggt cgcgcgcgcc gcgcccgacg gctacacgct tgttctcggc aactgggcca
     3121 cccacgtcgt caatggcgtt gtctacgcgc ttgcctacga cgtcgtgaaa gatttcgagc
     3181 cggtgtcgct cgtggcgacc caaccgatcc tgatcgtcgc caaaaagaca atgccggcgg
     3241 atgacctgca aggcctcatc gcgtggctca agacacatcc tgacaaggcc tccgccggca
     3301 atgccggcat cggcagctcg acctacgtca ccagcatctt cttccagatg caaaccggta
     3361 cacggtttca attggtaccg tatcgcggcg gcgcactggc gatgcaggat ttgctggcgg
     3421 gacagatcga cctgttgttc gacctcgttg ccaatgcgct gccgcaagtg cgtgccggca
     3481 ccatcaaacc ctatgccgtg acggcgaacg tccgcaccgc tgttgccccc gatatcccga
     3541 cggtggatga ggccggactg cccgggcttc acgttgcact gtggaacgcc atgtgggcgc
     3601 cgagggaaac gccgaagacc atcatcgcca agctcaactc cgccatcgtc gaggcgctcg
     3661 ccgatccggc ggtgcgctcg cggcttgccg atctaggtca cgaatttttc ccgcgcgatc
     3721 aaatgacgcc gcaggcgctt gccgcctttc agaaggccga gatcgcgaag tggtggccga
     3781 ttatcaaggc cgccaacatc aagggagaat aaatcgtcat cgccctcgcg gccctggcaa
     3841 agatgcgcca gaagcagaag gcggtagttc cggctaagcc tcacatgact tacggggcgg
     3901 cttggtcgcg acacatctgc ctgcctgccg cagaactgga ggcggcgttg ctcaatactc
     3961 ttgggcgggg ggcggctccg atcgacatca gaacgcgacg tgaaagatgg gttttagatc
     4021 tttgtcgata aagatggaat ctcggccgag cttgtcctcg ccgtcatggc cacatagggc
     4081 atcttgctga tcagcagtcg ggatcacacg ttcggccccg ccagttgcag ggcgggccat
     4141 cgctgagatg gaacagacct tcgaggtgtg tctttttcga tcaaggtccg cagggcgtcg
     4201 agctaccgtt tacagccgtg cgccgctcgg cagcagtctc caaaatgtga cgatgcgact
     4261 gaggggctca gcgggccgcg atcggtgagt ggggcatcgc aattcccttc ctctgcgtaa
     4321 caagggcgta gatgcgcctg gcatgcgacc tttctacgct gctgcgctta tgcggcgatc
     4381 aatcgcagcg tgaggagctg gtctcactaa aaattaatcc acgagacaga cgatcgtaac
     4441 ctgcgagaga ttatccggga gcgcaaggag cgttgatcac gctcgcaaac acggagcaaa
     4501 caaatatgac tcgcaataat gcccctggaa gcaaattcct cgcgctgcgc cgggcggtgc
     4561 tgctggcatc ggtcaccggc gtcggcatcg cggcgctcgc tggtggaatg ggcctgcaga
     4621 cccaaacgaa atctcccacg tggatcgcct ctgcggctgc agccgagacc gccgcgcagc
     4681 cgagaggctt tgctgacctc gtcgaaaagg taaagcccgc cgtcatttca gtgcgcgtcc
     4741 agttcgacaa gaccgcgcag cggacaaacg atgacgagat gacgccgttc cgtcagggct
     4801 cgccattcga aagattcttc cgtcaattcg gcttcgagga catgccgaac ggcatgcaaa
     4861 accggcaatt cggaatgccg caaattccga ggaccgccgc cgaaggctct ggcttcttca
     4921 tttcggccga cggctatgcg gtaacgaaca accatgtggt caacaatgcc aagaccgtgc
     4981 aggtaatcac cgacgacggc aaaacccttg ccgcgaaggt cattggtacc gaccccaaca
     5041 ccgatctcgc cctcatcaaa gtggacggca acaacttcgc gtttgtgaac ttcgccgatc
     5101 acgatccgcg cattggtgac tgggtggtgg cggtcggcaa tccgttcggc ctcggcggca
     5161 ccgtgacagc gggcgtcgtg tctgcacgcg gccgcaacct cggctcgggt gcgaatgatt
     5221 tcatccaaat cgatgcaccg atcaaccgcg gcaattccgg cggcccaacg ttcgacctcg
     5281 acggcaacgt gatcggggtc aatacggcga tctattcgcc gtccggcggt tccgtcggaa
     5341 tcggcttcga cattccagcc gatacggcga aaatggtcgt ggctcagctc agggataaag
     5401 gccacgtgac ccgcggctgg ctgggcgtgc ggatccagcc ggtgacggcg gatatcgccg
     5461 atagcctcgg cttgaagaag gctgcaggcg cgctcgtcga cgagccgcaa tccggcagtc
     5521 ccgccggcaa ggcgggcatt ctggcgggtg atgtcatcac cgccgtggac gaccatgacg
     5581 tgaaggactc gcgcgatctc gcccgccaga tcggtgccat ggcccccggc acctcggcca
     5641 agctctccgt ttggcgcaaa ggtgaagcca agaccgtaac cctgacgatt ggcgaactgt
     5701 ccgatcagcg ccaagccaac gccgaccagc agggcacgcc ggacaccacc ggcacgccac
     5761 gcctcgggct cacgctcgcg ccggcgagcg atgtcggtgg cgccggcaac caaggcgtag
     5821 ccgttatggc tgtcgatccc aacggtccgg cggcggagca cggcatcaag accggagacg
     5881 tgattctcga catcgccggc aagacggtgt cgaagcccga agatgtgcgc gaggagcttg
     5941 cgaacctgca caaggacggg aagcactcag tgctgatcca cctgaagtcc ggagctgcca
     6001 ccaggttcgt cgccgtcccg ttcgccaaag cgtgacattc aagaggggcg acctgccggc
     6061 catgtcgcgt attttggcat gagttccttt ccggcgggca agccccccgg gggacgggca
     6121 tggtcgcagg ggacgggcct gcgcccgtcc cccactttct tgaaaatcag ccgatattga
     6181 agccaggggc cgaacacatc cgcgtccttc gcgcgcaccg gcaaaaggtg tagccttgcc
     6241 gcatcgcttt cagttcaatc cgggaggaca tcatgtcgaa cggaaatgcg attgctggcg
     6301 gcttgctggg cgcgggcctg atgctcttgt ctggcggcac atgggctttc gatgacgcaa
     6361 actatcccga cctgaaaggc cagtggaacc gcgtggtggt cccgggcgtc gccccgtcat
     6421 tcgacccgac caagcgtccg ggcgttgctc agcaggctcc gctgacgccc gagtatcaaa
     6481 aaatactgga agcaagcctt gcggaccaag cggccggtgg cggcggcttt gcaccggatt
     6541 atctgtgcat ctcgtccggc atgccgatgc gaatgacggc ttatacgccg ttggaaatca
     6601 tcgtcacggc cgataccacc cacattacgg gtccggatgg gtacatgcat cgcagaatct
     6661 acaccgatgg tcgcgactgg cctgaggagg ttgagcccag ccgtattggc tattccgttg
     6721 gcagatggat cgacgaggat gccgacggaa aattcgatac gctcgtggtc gagacccggt
     6781 atttcagggg tcagcgcgcc ttcgatcaga ccggaattcc gctgcatgag gataatcaga
     6841 ccatcgtcaa agaacgaatc tatctcgaca agtcagaccg caacgttctg cacgacgaaa
     6901 tcactgtatt tgaccacgcg ctgacgcgtc cgtggacggt gaccaagaat tacgttcgcg
     6961 atcccagctc gcgcccggtc tggattgcgt gggactgcgc ggagggcaac ccgcacgttc
     7021 gcatcggcaa cgaggactat atggtgggcg gggatggttt gctgatgccc gccaagaagg
     7081 gccaacggcc gccggatttg aggtatttca acgagacgcg gaagtgaagg attacctcac
     7141 cgaaaacggc aacgcatacg gcctcccaaa cgccacgccg cccgtcacgg tctgcaccgg
     7201 cttgagataa gcacggccgt tgcgcgtgtt gttgcgcgta tcgacaaacg acaccggtcc
     7261 ttccaccagc tccatgatgg caatgtcgcc gggcgcgccg atttgcagcg tgccgagctt
     7321 tggtgtgcgg ttgatgatct tagccggatt gatggtcgcc atggcgacca cttgttcaag
     7381 tgtgaagccg agccctaaga acttgctcat cacccatgtg agatacggca tgccgggcgt
     7441 attgccggag acgacgtgaa tatcagacga gatggtgtcg ggcggagcgc cttgagcgat
     7501 cgccgcctcg gctaccgtat agtcgaagct gccgccgccg tgaccgacgt cgaacatcac
     7561 gccgcgccgc ttggcagcga gcgccgccgg cagcaaccgg ccgtcctgta cgatattggt
     7621 gaaggcgccc gtgagattag gagcgcccga ataggagtgc gtaaggatgt cgccagggcg
     7681 caagagatcg agtatctcgg tcatcagagc aacgttttcg acgccgccga tgtgtgccat
     7741 gacccggccg ccggtgccgg ccatctcgca cgcctggatc gcccgcttga ggggctcggc
     7801 gccgttccgg gcgatcacgt tttcggacat gcgcaccttg acgccgatgg cgatatcggc
     7861 gttttccgcc accgccttgg cacaggcatc tacctgggcg aagtcgatgt tataaagctc
     7921 cgggagcggg aagggcgtaa gcccgatatt ggcgatgtgt acgaaggcgt agaggcgcgt
     7981 gcgcgtctgg gccacgatga agcggcggaa accggcgaaa ttgttggcgc cggcgtcgcc
     8041 cgccgacaca caggtggtgg tgcattggtg cgccaccaat tcgtcagccg gaattccgat
     8101 cgcggagccg tacggataga catggcaatg aaggtcgacg aggccaggag tcaccagctt
     8161 gccgccagcg tcgatctggc gcagcgcccg cgtagccggg atgtcgggcg cgactgcttc
     8221 gatcatgccg tagcggatgc caatgtcgcg ccggccgcgc agtgattggc tcggatcgag
     8281 cacctcgccg cccttgatca ccagatcgaa cttgtcgtcc ggccccatgg cggtgaatgc
     8341 cggtccgctg gcggcagaga gcgcgagtga gccgactgta gcgagcatac gccgtcgtgt
     8401 gatgtgcatg atgtcctccc cgaatacttt gattcgtaga tagccgtttt cgaaccaaga
     8461 ggggagggcg ccacaggctt gcgtcgtgac ggcaacgcga aatcccctcc tcgttgtgtg
     8521 gagggttggg ggcgcgcgag acggctcctg cccgccggac caacccgccc gatattatcg
     8581 gcggcagttt gttccggtat cttggaaaat gacgtattgt caaaagcttg tgatgtccat
     8641 tgaacatggc gcggaattgg gcgccaggcg gtagctatct tcatcgtggt gccgcttaag
     8701 agcgcggagc ttgccttgcg gagttctcta ccggaaacat cattgttgtc gcacacgtcc
     8761 ggtcacgttt ccaagtgggt catcgccgcg atgtgtttgg cggcctacgt catcctcgca
     8821 tgggtcagct tcatccatgt tcacaagggt ctgccggtca caccgtggga tcccggtctg
     8881 ggcgttgtgt ttgccttgat ggtgcttgcc ggccctcggg ccggattagt cctcctcgcc
     8941 ggcgtcatca tcgcagaagt cctggtcctg cagaatgagg tcgattggcc cgtagtcatc
     9001 ggcattggtg caattacttc actgagttac acgtcggtca cggtttttgc gcgcctgcat
     9061 ttgcagatcg atgtcgggct tttccatctc cgcgacgtgc tgctgttgct cgtggtgggc
     9121 ctcgcgggtg ccgtaatcga cacggttctc ctgacggtgt ttttatttgc ggtcgggcaa
     9181 ctgaatgttc gcgacgttgt gcaggttttc tcgccactcc taattggcga catgattggt
     9241 attgcggtag tgacgccgct cctgctgcgg tttgtctttc ggcagcgcag cgttggctta
     9301 catcaactgc tgtcaatcgc cccggaaggc gctctctacc tcgtcgttat cggtgccgcc
     9361 ctttgggcga tcattagcag cgagaacctt tatggattca ggcttttcta cctgttattc
     9421 atgccggttg tgattgcggc ggttcggcat gggctcgacg gcgcctgctt tagcctagcc
     9481 gccacccagt ttggcctgat cggacttctg catctttccg gatataacgc agcggaattc
     9541 accgaattcc aggtgctaat gctggttctc acggtaaccg gattaattgt cggtgtagtc
     9601 gtcagcgaac gtgaaaattc cgatcgcctc gcgcgcgatg cacaggcacg cctgatggag
     9661 aggcaagccg gagcagcgca tgcggcgcgc ctcaatttgg tgagcggtat ggcttcagcg
     9721 ctcgcccacg agattaacca accgctgacg gctgcccgtg cactcgcgcg atcggtgcag
     9781 cacctcttgg gtacgcccgg tgccgatctg accagagccg gcaacaatct gacggccctg
     9841 ctagcccata tcgatcatgc cggtgctatt gtgcgccgta tgcgcgattt tattcgtcgg
     9901 ggcggtccac atgtgagcac gatcgacacg cgaaaaatgc tggagcaggc gctgacgttg
     9961 gcatttgccg aagcctccgc gaaacatgtt cgtcttgatc tcgacgcacc ggattctttg
    10021 cctgtcattc atggtgatcg cgttcaattg gagcaggtgg tgctcaatct cgttcataac
    10081 gccgttgagg cgatcgttgg aacaggtcga tcagaggggc acattcgcgt ggtcgcgcgt
    10141 catcacacgg cgccgccacg tgtcgagatc ggcgtactgg ataacgggcc tggggttgaa
    10201 gaccaactgg cagttcgctt gttcgatcct ctcgcgacgt caaagcaaga cggcctcgga
    10261 cttggccttt cgattagcgc ctcaattgtc gaagcgcatg gcggtcgcgt ctggctccac
    10321 tgccgggagg cgggcgcgac ggaattccgg ttttcggtgc cgctcgtcca atcgaaagtg
    10381 ctatgactat gccttccccg acgatcttcg ttatagacga tcacgcagca gtgcgcgccg
    10441 cgctgggcga gatgctcagc gtgttcggat acacggtcga gacctacgaa tcggccgaca
    10501 gttttcttga ggcgatcgat caacagaact ctggttgcat tgtcgctgat gtgaaaatgc
    10561 ccgggacaga cggcatcggc ctcgtgcgcg aactcgcccg tcgcaatgtc gcgcttccag
    10621 tcgtgctcat ttccggtcac gcagacgtgc cgatggctgt ggcggcaatc aagtccgggg
    10681 ctgaagattt tattgagaag ccggttgacg acgcccaact cgttgcggct atcaaccggg
    10741 cccttgcgcg aaggttcgac caacaagatc tgcacaacgc acaacgtgcc ctcggtgaca
    10801 aattcgcgcg cctgacgcct cgtcaggtcg aaatcttcga tttcgttgtg gaaggtttca
    10861 cgagtcatgc catttccgcc aaattgaata tcagcgtgcg gacggtcgaa agctaccgcg
    10921 ctgaagttat
//
LOCUS       DATILV010000581         3851 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2697244, whole genome shotgun sequence.
ACCESSION   DATILV010000581 DATILV010000000
VERSION     DATILV010000581.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3851
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2697244"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..437)
                     /locus_tag="VLJ17_13495"
     CDS             complement(<1..437)
                     /locus_tag="VLJ17_13495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ion transporter"
                     /protein_id="HSV24029.1"
                     /translation="MGSSRARLLELQKQYSDQLLSVLTVLLAVMLFVVAPLQATGIST
                     IGIDLFGVIVALVMVAGVLVISGSPTATLVMLAGLLMNVAVVIARLIRPLTYDLYLVA
                     AAWFVIVFVLGFVVARKIFERGQVNYHRIIGAALLYMLIAMAFV"
     gene            complement(453..821)
                     /locus_tag="VLJ17_13500"
     CDS             complement(453..821)
                     /locus_tag="VLJ17_13500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24030.1"
                     /translation="MTAEYFGELNMTKLALLSIAAISLGVQAAIADEVPNFDIRKSCK
                     VDVQAFQSNASGQASSTGCLKDEENARTTLVSQWTQFAAENRTRCVRMVGDGAASRSY
                     VELLTCLQLAKDVQGLPKEK"
     gene            1094..2257
                     /locus_tag="VLJ17_13505"
     CDS             1094..2257
                     /locus_tag="VLJ17_13505"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HSV24031.1"
                     /translation="MPVINAMERGGNREGQRRVEKLDTSRGTRGARFAFAVNDPQPVT
                     EVSRLWRTAAQSATIGMFVLLFIVALSLARPILLPVASAFVVTMMLGPLSARAGRYGI
                     PSLLSAIVLWLLVIGVFYGVIVLLASPAVEWIGKAPDIGRNIEEKLRVLDRPLAALQE
                     LRDALLPSDKKGGLGVDITAFVQPAVAIVTPAIGQTFIFFGTLFFMLLGRAQLREVLV
                     VFFDQREARLRTLKIMNDIEHNLTGYLSIVALINIAVGICGGAVAWVAGLPDPAAWAV
                     LGFMLNFIPYIGALIMEAALFMVGLVTFPSLTQALVAPLLFLGLATLEGHFITPSIMG
                     RRLTLSPLTVFLSLVFWTWLWGPVGAFLAVPLLIMALVVADHLFPEDEPELPA"
     gene            2323..2850
                     /locus_tag="VLJ17_13510"
     CDS             2323..2850
                     /locus_tag="VLJ17_13510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HSV24032.1"
                     /translation="MDFSAVAQHVVDFVRINEAWAVPIVFALAFGESLAFISLLIPAW
                     GALVAIGALIGTSGISFWPIWVAASIGAAVGDWVSYWVGLKLERTVAHVWPLSRHPDL
                     IPRGEVFMKKWGMPGIFIGRFFGPLRASVPLIAGIFEMPYWRFQFANFTSAFVWAWVL
                     LKLGDGISKLLALFL"
     gene            complement(2912..3451)
                     /locus_tag="VLJ17_13515"
     CDS             complement(2912..3451)
                     /locus_tag="VLJ17_13515"
                     /inference="COORDINATES: protein motif:HMM:NF015862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HSV24033.1"
                     /translation="MRCLTVLAGALGAALLISSGAYAQVPPDPNNPNESVPDAMNPPA
                     YGETINTENAKKVATAAIAEAQKRNWNGFCVAIVGPSGDLVYFEKQDNCQFASNGISQ
                     QKARAAARYRRPTVVFERLLGKGDFFAYLPTLGNDFIASRGGNPIMVGGKVVGAIGVS
                     GGTGSQDDVVSQAGAGALK"
BASE COUNT          716 a         1111 c         1163 g          861 t
ORIGIN      
        1 acaaaagcca ttgcaatcag catgtagagc aaggccgcgc cgataattcg gtgatagttg
       61 acttgccctc gttcaaaaat ttttcgagcc acaacgaatc cgagaacgaa gacgatgacg
      121 aaccaggcgg ccgcaacgag ataaagatcg taggtcagag gcctgatcaa tcgggcgata
      181 acgactgcaa cattcattaa aagcccggcc aacatcacga gcgtcgccgt cgggcttcca
      241 gatatgacca gcacgcctgc gaccattacc agcgcgacga tcactccgaa tagatcgatt
      301 ccgattgtag aaattcccgt ggcctggagc ggggccacta caaacagcat gacggccagc
      361 aggaccgtca ggacgctgag aagctggtcg ctgtactgct tctgcaattc gagaagccgg
      421 gctcggctgc tgcccatagg ctcagtcccg cgctattttt ctttgggcag gccctgcacg
      481 tctttcgcca attgcaggca ggtcagtagc tcgacgtagc tccgggaggc tgcgccgtcg
      541 cccaccatgc gcacgcatct ggtcctgttc tccgcagcaa actgggtcca ttggctcacg
      601 agagtcgttc gcgcattttc ttcgtccttc aggcagcccg tagaactggc ttggccgctc
      661 gcattgctct gaaaggcctg tacgtcgacc ttgcagctct tacggatgtc gaagttcggt
      721 acttcgtcgg caatcgcagc ctgaacaccg agagatatgg ccgcgatgga aagcagcgcg
      781 agtttcgtca tgttcaattc tccgaaatat tcagcggtca ttctgttatg tactcgagga
      841 gcttacccac ttcgcgtgct atcgtacaaa tcacgtgctc gtttattatt gcgtgtgcct
      901 aagatcagaa tattcggggc gttacgattg gcattggacc atggcggaaa atgccaatct
      961 atagaaatag attgcgtgtg tagaccgacc ggcagacccc agggcgaatc aggctacccc
     1021 gcgtcagccc cgcgcagggc gtgattgggc cgaaaaccgg tgtgctgccg ctggtcggca
     1081 accaaaagga accttgcccg ttatcaatgc catggagcga ggtggcaaca gggaagggca
     1141 acggcgcgtc gagaaactgg atacctctcg cggcacgcgc ggcgcgcgct ttgccttcgc
     1201 ggtcaacgat cctcaaccgg tgacggaagt ttcacgcctt tggcgcacgg ctgcccaatc
     1261 ggcaactatc ggcatgttcg tgctcctctt catcgtggcc ctcagcttgg cgcgaccgat
     1321 actgctgccg gtggcgtccg ctttcgtggt cacgatgatg ctcggcccgc tgtcggcacg
     1381 agcaggccgc tacggcatcc cttcgctgct gtcggcaatt gtgttgtggc tgctggtgat
     1441 cggagtgttc tacggcgtga ttgtgctctt ggcgtcgccg gcggtcgagt ggatcggcaa
     1501 ggcgccggac attggccgca acatcgagga aaagctgcgc gtacttgatc ggccgctagc
     1561 agcgttacag gagctgcgcg acgcgctttt gccttcggat aaaaagggcg gcctcggagt
     1621 cgacatcacc gccttcgtgc aaccggccgt ggccatcgtg acgccggcga tcggccagac
     1681 gttcattttc ttcggcacgc tgttcttcat gctgctcgga cgcgcgcagc tccgcgaggt
     1741 gctggtggtg ttcttcgatc aacgcgaagc gcggttgcgc acgctcaaaa tcatgaacga
     1801 catcgaacac aacttgaccg gctatctgag cattgtggcg ctcatcaaca ttgcggtcgg
     1861 aatttgcggc ggagcagtgg cgtgggtcgc cggcctgccg gatcccgcag cgtgggccgt
     1921 gctcggattc atgctgaatt ttatccccta tatcggcgcg ctgatcatgg aggctgcatt
     1981 gttcatggtc ggccttgtga cgttcccaag tctcacacaa gcgctggtgg cgccgttgtt
     2041 gtttctgggc ctggcgacac tggaggggca ttttattacg ccgagcatta tggggcgccg
     2101 gcttacgctc agtccgctca ccgtattctt atcgctggtt ttctggacct ggctgtgggg
     2161 ccccgtcggc gcgtttctgg cggtgccact gctgatcatg gcattggtcg tggccgacca
     2221 tctattccct gaggacgaac cggagctgcc ggcgtagcgt actggtgtac cgcgcgccgc
     2281 cgggttagac acgagtgaca acgcggtcag cccgaaccct cgatggactt ttcagccgta
     2341 gcccaacacg tcgtcgattt tgtccgcatc aatgaagctt gggcggtgcc gatcgttttt
     2401 gcgctggcat tcggggaatc gctcgccttc atttcgttgc tgattccggc ctggggcgcg
     2461 ctggtggcta tcggcgcctt gattggcacg agcggcatta gtttctggcc gatctgggtc
     2521 gcagcctcga tcggcgccgc cgttggcgac tgggtgtcgt actgggtcgg cctcaagctc
     2581 gaacggaccg tcgcgcacgt gtggccgctg tcgcggcatc ccgatcttat tccacgcggc
     2641 gaagtcttca tgaaaaaatg gggcatgccc ggcattttta tcggcaggtt cttcggcccg
     2701 ctgcgcgcgt ccgtgccgct gatcgccgga attttcgaaa tgccgtactg gcgatttcag
     2761 tttgccaatt tcacgtcggc cttcgtatgg gcgtgggtgc tgctcaagct tggcgatggg
     2821 atatcaaaac tgttggcgtt gtttttgtag ttctgcggaa aaaaattccg ccgggttgcg
     2881 ttccggcgga atttcagttc gagcgtggcg cttatttcag cgcgccggcg cccgcttgcg
     2941 aaacgacgtc gtcttgcgag ccagtgccgc cgctcacgcc gatggcgccg acaaccttgc
     3001 caccgaccat gattggattg ccgccgcgcg aggcgatgaa gtcatttccg agcgtgggca
     3061 gataggcgaa aaagtcaccc ttgccgagca gccgttcgaa caccaccgtc gggcggcggt
     3121 atcgcgctgc ggcgcgggcc ttttgctgcg aaataccatt cgatgcgaat tggcagttgt
     3181 cctgtttttc gaagtagacg agatcgcccg agggcccgac gatcgcgacg cagaatccgt
     3241 tccaattccg cttttgagct tcggcaatcg ccgctgtggc tacctttttt gcgttttcgg
     3301 tatttatagt ctcaccatag gccggcgggt tcattgcgtc cggcacgctt tcgttcgggt
     3361 tgttcggatc cgggggcacc tgtgcgtagg cgcccgaact tatcagcagc gcggcgccta
     3421 gggcgcccgc taataccgtc aaacaacgca ttgtacttcc tcccaagtga ttgatttcct
     3481 ggtcgatcag gctgggcctt gtcctgcatt ggctggcgca ggaccattcc caactggcag
     3541 attatcgaac catccggcct tcgcctatag ccgcaagttg cgctactgga agtggaataa
     3601 ggcgcagcac acggggttac tgggcaggag cggtcactgc cgacaagaaa tcaaacatgg
     3661 gccatcgccg acggcggctc aaatgccagg gagaaacagc atgcaattga cacgacgcaa
     3721 tctattcgcc ggggcggctg cagcggggat cgttgccggg tcaaagacga tcgtttcgcc
     3781 ggcgcaggcc gcggcaccgg tcgcaggcaa gcaaaatgcc gggtggtacc gctacaaagt
     3841 cggtagcttt g
//
LOCUS       DATILV010000582         2858 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4226085, whole genome shotgun sequence.
ACCESSION   DATILV010000582 DATILV010000000
VERSION     DATILV010000582.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2858)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2858)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2858
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4226085"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            65..453
                     /locus_tag="VLJ17_13520"
                     /pseudo
     CDS             65..453
                     /locus_tag="VLJ17_13520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558244.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(499..903)
                     /locus_tag="VLJ17_13525"
                     /pseudo
     CDS             complement(499..903)
                     /locus_tag="VLJ17_13525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716666.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1801 domain-containing protein"
     gene            complement(1029..1439)
                     /locus_tag="VLJ17_13530"
     CDS             complement(1029..1439)
                     /locus_tag="VLJ17_13530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018242336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HSV24034.1"
                     /translation="MTNTATEALSVVVEREIPFPPETIWRALTQPHLIEEWLMKNDFK
                     PVVDHRFNLRADWGVVDCQVLAVEPNKTLSYTWGSLGLESVVTWTLTPTSTGTHLRME
                     QSGFRPDQSQYYQGAKYGWQQFFAALEQVLARID"
     gene            complement(1436..1759)
                     /locus_tag="VLJ17_13535"
     CDS             complement(1436..1759)
                     /locus_tag="VLJ17_13535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017988558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HSV24035.1"
                     /translation="MLNAHDVLFRTLADPTRRAIFERMCREGEQTVGALTARAGVSQP
                     AVSKHLGVLKQAGLVRGRHEGRQTHYSAQLGALAPLIDWTSQMAGFWQSRFDHLEDLL
                     KRMDQ"
     gene            complement(2254..>2858)
                     /locus_tag="VLJ17_13540"
     CDS             complement(2254..>2858)
                     /locus_tag="VLJ17_13540"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSV24036.1"
                     /translation="THLIDNLLTSTRLVESGAGLYFHPQEVDLRELVHDVCQLHLEIS
                     PGSTIVEQLGDRSLRMVGDPKLLSQVFDNLLSNAIKYSPGGGVVIITLRTEDGRYVVA
                     VKDNGIGIPPADVGRLFERYFRGSNVSGIVGTGVGLDLVKMVVDLHGGDIAVESQEGN
                     GACFTVRLPIKPLPRADRPQPPSIEMIAELRAAEERVEAG"
BASE COUNT          582 a          870 c          793 g          613 t
ORIGIN      
        1 ctgaaggggc cgaatcatac ggtacgaact cctcaccgac gatgagtgga ctgccatcaa
       61 gccaatgctg ccgaacaagc cgcgcggcgt ccacgggtaa acgaccgtcg tgtcctcaac
      121 ggcatcttct gggtcttgcg atctgaggcg ccgtggcgcg atctgctgca gaacttcggc
      181 ccatacacca cttgctacaa tcgcttcgtt cgctggcgac gagcgggcgc tcgccagggg
      241 tcatgacgcg accgcgcctc ggcaaatatc ccggcaaaaa gcaatcgggc agagacgcta
      301 gctttcagtc cgtatcttta ccgggctcgc aacttggtcg agcggttctt caacaagatc
      361 aagcaccctc gtcgcgtggc aacgcgctac gacaaactcg cggccaacta ccttgcattc
      421 gtccaacttg catccatgcg cctatggctg cgtgttaatg agtccacgtc ccagcgaaaa
      481 agctatagct tcatagcttc atgccttttt acttttgtgt actttcgctc gagcacccgt
      541 aggcgctttc ttcttcaatt ttatctgatt gtaatcaata gcggcacgga cgagattttt
      601 tagagtacgc tcattaatct tatcaccctc gaaaaaatcg atcgctcgtc tcgcgttgcc
      661 ttcaagaccc gcgtcgaaga gcttgtcagg atctgggagg ttcgccccgt gggaaaaggt
      721 aagcttcacc ttatttttgt gcgcgttggc gaccgcgatt attccgtggt gagaccatcc
      781 acttccattc ctcgattatc tcccggtcgg cctccaggat gctcttgcgg atgccggcga
      841 acgttttgcc acccagtctg tgagttccgt gatcagctgg tcaatacgtt ccgatggatt
      901 cattggatct ttatgcctcg aatctggtcc cgtttgatcc gaccacaata gtaatgcagc
      961 gactacatta ttaaacggga cgcaagcagc aagaggccgt agggggtctg gcggttgtaa
     1021 tcgctgcatc aatctatccg cgccaatacc tgctccaggg ctgcaaagaa ctgctgccac
     1081 ccatacttgg cgccctggta gtactgcgac tgatccggcc ggaagcccga ctgctccata
     1141 cgcaggtggg tccccgtgct cgtaggggtg agagtccaag tgacgacact ctcgagacct
     1201 aaggaacccc acgtgtaaga caacgtcttg ttcggctcga ctgccaggac ctgacagtcg
     1261 acaacacccc agtctgcgcg aagattgaaa cggtggtcca cgacaggctt gaagtcgttc
     1321 ttcatcagcc actcctcgat caggtgtggt tgcgtgagcg cacgccagat cgtttccggc
     1381 ggaaaaggta tctcccgttc gacaacgacg gagagcgctt cggtcgcagt attggtcatt
     1441 gatccatcct tttgagcaga tcttcgaggt ggtcgaatcg gctctgccag aacccggcca
     1501 tttggcttgt ccagtcgatc agcggggcca aggcgccgag ctgcgcgcta tagtgcgtct
     1561 ggcgaccttc gtggcggccg cgtaccagcc cggcctgctt caggaccccg agatgctttg
     1621 agacggccgg ttgcgagacc ccggcccgag ccgtcagggc cccgaccgtc tgctctcctt
     1681 cgcggcacat ccgctcgaag atagcccgcc gagtcggatc ggcgagcgtt ctgaagagca
     1741 catcgtgagc gttcagcatc tggatcgata acctgctggc tattgatcta tatatcaccg
     1801 ctgagatatg tgtcgtcaag caggaatgtg gaacggcaaa attatcctcg tcacaggggc
     1861 caacaggtgg ggcgcgccgt cgcctgcagg ctggcgtcac tcggccacga tgtggtcgca
     1921 atggtccggg acacgtccaa gccgcaagca ggcgcctgcc atctggaatc gccctgcgcg
     1981 ctcgcactaa gaatgcctct gctttgaaga gggcgctcgc gggaggtcct catttctagc
     2041 gatggcgctg caagcgcagt catgcgccac cacgccaacg ccaccgaggc agcttcggtc
     2101 gccattgcgt gagcggcacc gctcctaagg aggcatcctt gaatttacca taccccgttg
     2161 gttatgcatc atgcattatc gttatcgatc atacgtcgtc gtggggacgt ggggacgcgc
     2221 tttttatggc tgctatccgc ttggcccctc accttacccc gcctcgaccc gctcctcggc
     2281 tgcgcgcagt tcggcgatca tctcgatcga ggggggctgc ggacgatcgg cccgcggcag
     2341 tggcttgatc ggcagccgga cggtaaaaca cgcgccgttg ccttcctggc tttcgaccgc
     2401 gatgtcgcca ccgtgcaggt cgacgaccat cttcacaaga tcgagcccga caccagtgcc
     2461 cacgatcccg gacacattgc tgccgcggaa atagcgctcg aaaagtcgtc caacgtcggc
     2521 gggcggaatg ccgatgccgt tgtccttgac cgccaccacg taccgcccat cctcggtacg
     2581 caaggtaatt atcacgacac cgccaccggg cgaatatttg atggcgttgg acaagagatt
     2641 gtcgaaaacc tgggacagca acttcggatc cccaaccatc cggaggcttc gatcgcccaa
     2701 ttgctccaca atggtcgagc cgggagagat ctcgaggtga agctggcaaa cgtcgtgcac
     2761 cagctcgcgc agatcgacct cctgcggatg aaaatagagc ccggcaccac tttcaaccag
     2821 acgcgtcgag gtcagcaggt tgtcaatcag atgggtca
//
LOCUS       DATILV010000583         1690 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4993635, whole genome shotgun sequence.
ACCESSION   DATILV010000583 DATILV010000000
VERSION     DATILV010000583.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1690)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1690)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1690
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4993635"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1690)
                     /locus_tag="VLJ17_13545"
     CDS             complement(<1..>1690)
                     /locus_tag="VLJ17_13545"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HSV24037.1"
                     /translation="DLPQLQDVWQGLLVSGKSGELEARLRRADGVYRWFLFRVEPLRD
                     SQGTIAKWYGTNTDIDDRKRAEALLAAENQILEMVATGRPLAGILDGLCRLVDKLCDK
                     SLASILLIDPNGHCLRRGAGPSFPEAFMAAVDGVEIGPCVGSCGTAAYRKEQVIVSDI
                     ATDPLWADYRELALANGLRSGWSTPILSSDGSLLGIFGIYGREPRTPTPQHQHTIKQM
                     THLASVAIERKQAAESLRASELLARGQLEALTHTLDALAQESDPDRLLEHVLRTIIEQ
                     SKAHSVSVWDRDPEGDWLELFAMIEDGRFQVRSGTFHPAARLAMLAQDHPVWREILPT
                     GLHAVIEDIDQPIVRMCVGMGPDATWHDILKDGELAPSIMRFKSHLRGIGVHTILFVP
                     MLVAGRVTGFIGIRFTLKRGFRQEEIELTRALAHQATLAIQLTRLSAQGRQSAVMAER
                     NRMARDIHDTLAQGFTGVIVQLEAVEEAMSKNQAAKASGHLNRAGDLARESLREARRS
                     VQALRPQALEEKPLSEALKALIEKMTTGTTVQAEFTLRGQPLELPAEWEANILRI"
BASE COUNT          358 a          517 c          468 g          347 t
ORIGIN      
        1 cgatccgaag aatatttgct tcccattccg ccggaagttc tagcggttgg cctcgcaagg
       61 tgaattccgc ctgcacggtt gtgccagtgg tcattttctc gatcaacgct ttcagcgctt
      121 cgctcaacgg tttctcctcg agcgcttgcg ggcgaagcgc ttgcacggaa cgccgcgctt
      181 cacgcaggct ctcgcgggcg aggtccccgg ctcgattaag atggcccgag gctttggccg
      241 cttgattctt ggacatggcc tcctcaacag cttccagttg aacgatcacg ccggtgaatc
      301 cttgcgcgag cgtatcgtga atgtcgcgag ccatccgatt gcgctcggcc atcacggcag
      361 actgccggcc ttgggcggaa agacgcgtca actggattgc cagcgtcgcc tgatgggcga
      421 gagcgcgggt cagttcgatc tcctcctgcc ggaaaccacg cttgagagta aaccggatgc
      481 cgatgaatcc agtaacacgt ccggcaacga gcatcggcac aaacagaatt gtgtggacac
      541 cgatcccccg caaatgcgac ttgaaacgca taatggaggg agccaactca ccgtccttca
      601 ggatgtcgtg ccaggtcgca tcggggccca ttccaacaca catccggaca atgggctgat
      661 caatgtcttc gatgacggcg tgaagacccg tgggcagaat ttccctccac accggatgat
      721 cctgcgccaa catggcgagc ctcgccgccg gatggaaagt gccactacga acttgaaagc
      781 ggccatcctc gatcatggcg aagagttcca gccaatcacc ctctgggtcg cgatcccaca
      841 cgctgacact atgcgccttc gattgctcga tgatcgtacg cagcacatgt tccagcaatc
      901 tgtccgggtc ggattcctga gccagcgcat cgagtgtgtg agtgagagcc tccagttggc
      961 cacgggccag aagttccgac gcgcgcagcg attcggccgc ttgtttccgt tcaatcgcga
     1021 cggacgccag gtgcgtcatc tgtttaatgg tgtgttgatg ctgcggagtt ggggtgcgag
     1081 gttcgcgtcc gtagattcca aagattccta ataagctgcc gtctgaagac agaatcggtg
     1141 tggaccaccc ggatcgcagt ccgtttgcca aagccaattc gcgataatca gcccacagcg
     1201 gatctgtcgc gatgtcagag acgatgactt gctctttgcg gtaggcggcc gtgccgcatg
     1261 aacccacaca aggaccgatc tcgacgccgt caaccgcagc catgaaggcc tctggaaagc
     1321 taggccctgc accacgtctc aggcaatggc cgttcggatc aatcagtaaa atcgaagcca
     1381 gcgatttatc gcagagttta tccacaagcc ggcataaccc atccagaatc ccggcgagcg
     1441 gcctgccggt tgcgaccatc tcaagaatct gattctctgc cgctaacagc gcctcagctc
     1501 gtttgcggtc atctatgtcc gtgtttgttc cgtaccactt ggcgatggta ccctgcgaat
     1561 cacgcaacgg ttcgacgcga aacagaaacc agcgatacac gccgtcagcg cgccgcaatc
     1621 gggcttccaa ttcccccgac ttaccggaaa ccaggagccc ctgccacacg tcctgtaatt
     1681 gcgggaggtc
//
LOCUS       DATILV010000584         5963 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_910037, whole genome shotgun sequence.
ACCESSION   DATILV010000584 DATILV010000000
VERSION     DATILV010000584.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5963)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5963)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5963
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_910037"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            178..1392
                     /locus_tag="VLJ17_13550"
     CDS             178..1392
                     /locus_tag="VLJ17_13550"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSV24038.1"
                     /translation="MHDVPGSHWHEPTAGKRAGFGKFGRPKTPYDLFMEQEGIPIFRD
                     IGVSKVQNLPLAPWRRMGGRGTYIQLYGTEGKWGCYVVEIPGAGALNPEKHLYEELFY
                     VVEGRGTTEVWLDGDNKRHVFEWQQGSLFSIPVNAWHRIVNASSSPALLLGGTTAPNL
                     MNLVNNTEVIFNCPIAFRDRFSGADDFYKYKDDIEPDPVRGLAMRRTNFIPDIVNCDL
                     PLDNRRSPGFRRVEPFMTGNVFYLWIGQHENGRYSKAHAHTSAAVLICVKGKGYTYTW
                     PEHAGVTPWKDGKEHLVKRVDYEPVGMVSAAPGGARWYHQHFGASKDPLRLTAWFGPH
                     SPGREPGPPGETHIDYTGMDITEGGTAIPYWMEDPFIAKEYGEILKREGAANRMIADF
                     YDKDYKGELPKE"
     gene            complement(1417..1701)
                     /locus_tag="VLJ17_13555"
     CDS             complement(1417..1701)
                     /locus_tag="VLJ17_13555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24039.1"
                     /translation="MIIASSKVRLPRPTARFSVDAEHLQPDADGAVLERCGPRRAGPA
                     FVVRLREKPAMKLQTGYQKIESIKRFAADPVSQPARADRSNEAGLAATNV"
     gene            1879..2085
                     /locus_tag="VLJ17_13560"
     CDS             1879..2085
                     /locus_tag="VLJ17_13560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24040.1"
                     /translation="MDELLAFLSLAKIPYMNLLPYTCWTMGAVRHGVCVAKVRIAPVK
                     EFADRVERRAIDVKSALQVFCLAW"
     gene            2460..3143
                     /locus_tag="VLJ17_13565"
     CDS             2460..3143
                     /locus_tag="VLJ17_13565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007604901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24041.1"
                     /translation="MKTAKSIPLAGLFGVAIALAGTIAAFGQSAPTPPSMKTIGTPSA
                     AAKPEIVPSLFVMNSRGATLQRDTLVLIGVTPNSIIFADRPVRSAGHQPTADVIAEWG
                     SGDDSFAKNPPNATVSVLGKDGSVKDAVVVLTNPKLDGDKLTFNVQILEGDLAGADGP
                     AAVFIDIIGRPLTPLSFAGVARRSAFRGAMYAGAVGAAAYGAAAYAAPYYRPYAPPAC
                     GYYPYPPCY"
     gene            3547..5340
                     /locus_tag="VLJ17_13570"
     CDS             3547..5340
                     /locus_tag="VLJ17_13570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV24042.1"
                     /translation="MTRLVLGLLRPYRGWLAVVFVAMLLEIATSLAAPWPLKLILDDA
                     LGKHRLPDWLAWAHDYGFGRHTLGVALFAGVATLVIAVIGAIATYIDNYYTTSVGQWV
                     ANDLRIRIYEHLHRLSLRFYDTAKTGALMSTITSDVATIQSFASSSTLSIIVDIITIV
                     FMIGLMFWLDWDFTLIALAITPFLLMAVMHFKKAVKEVTRTVRARQSEIVAVVQEGLG
                     SVRAVKAFGRQDLEIAHLEAASHATVEAALRARQVKSLLSPMVSIVVAICTAIVLWRG
                     TALIVAGTMTAGALTVYLAYLAKFFKPVKDLATMTSAIAQTTVALERIQKILSADEII
                     RERQDAADPGRVNGAIAFENVAFGYDDETQVLRDVSFKIEPGQVVGIVGPTGSGKSTV
                     LSLLPRFYDPSGGRILIDGADVATFRLESLRAQVGFVLQETVLFRGTIRENIAYGRPG
                     ATDEEVVAAAKVANADEFIGRMPHGYDTVVGERGDTLSGGQRQRIGIARAVIRNSPIM
                     ILDEPTAALDTESEHLVIDALRELMKGRTVIMIAHRLSTISQADKIIVLKDGVVAEEG
                     SHSELLARNGVYAELHRIQYETAAAVPANAA"
     gene            5379..>5963
                     /locus_tag="VLJ17_13575"
     CDS             5379..>5963
                     /locus_tag="VLJ17_13575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HSV24043.1"
                     /translation="MSHTLIVLPDDTISAILEPINAAKRSLNIRMFLFTEPTLLRAVI
                     AAKQRGVNVRVMLNPARRDGKSENQKARKALLAASVKVRDSSAAFALTHQKSMVIDDK
                     IGFVESLNWEPRDLTETRDYAVTTTNKSEVNEMIRCFDADWSRKPFKPDPKSHLIWCP
                     NNGRERIATMVDEAKKTLWLQNERYQDTVIVERLV"
BASE COUNT         1222 a         1776 c         1760 g         1205 t
ORIGIN      
        1 acggaagaga agactcatca tgtgctgaat gcctgttaaa ctcgctgttc gcgcaagctc
       61 gcccaacgct cgcccactgc ccccttgcgg gatgccacgc ttcgtgggca tgacaggcga
      121 ggatttgcgg tgacctttag atgaaggcgc gccgcccgaa ccgcaaggga acccgccatg
      181 cacgacgtac ccgggtcaca ctggcatgag cccaccgcag gcaagcgcgc cggcttcggc
      241 aagttcggcc ggccgaagac gccctatgac ctattcatgg agcaggaggg catcccgatc
      301 tttcgcgaca tcggcgtgag caaggtgcag aacctgccgc tggcgccatg gcggcgcatg
      361 ggcggccgcg gcacgtacat ccagctctac ggcaccgagg gcaaatgggg ctgctacgtc
      421 gtcgagatac cgggcgccgg tgcgctcaat cccgagaagc atctctacga ggaactgttc
      481 tacgtggtcg aagggcgcgg caccaccgag gtctggctcg atggcgacaa caagcggcac
      541 gtgttcgagt ggcagcaggg ttcgctattc tcgattcccg tcaatgcctg gcatcgcatc
      601 gtcaacgcca gctcgagccc cgcgctcctg ctcggcggca ccaccgcgcc gaacctgatg
      661 aacctggtca acaacactga ggtgatcttc aattgtccga tcgcgttccg cgaccgtttc
      721 agcggcgccg acgatttcta caagtataag gacgacatcg agcccgaccc ggtgcgcggc
      781 ctggccatgc gccgtaccaa cttcattccc gacatcgtca attgtgacct gccgctcgac
      841 aaccgacgct cgccgggctt ccgccgcgtc gagccgttca tgaccggcaa cgtcttctat
      901 ctatggatcg gccagcacga gaacggccgc tactccaagg cgcacgcgca tacttcggcg
      961 gcggtgctga tctgcgtcaa gggcaagggc tacacctata cgtggccgga gcacgccggt
     1021 gtcacgccgt ggaaggacgg caaggagcat ctggtcaagc gcgtcgacta cgagccggtc
     1081 ggcatggtgt cggcggcgcc cggcggcgca cgctggtacc accagcattt cggcgcatcg
     1141 aaggacccgc tgcgcctgac ggcgtggttc ggcccccatt cgccgggtcg cgagcccggt
     1201 ccgcccggcg aaacccatat cgactatacc ggcatggaca tcaccgaagg cgggaccgcc
     1261 attccctact ggatggaaga cccattcatc gccaaggaat acggcgaaat cctcaagcgc
     1321 gaaggtgccg ccaaccggat gatcgcggat ttctacgaca aggattacaa gggcgaattg
     1381 ccgaaggagt aggtgaacgc cgtctgctcg cgctgatcaa acgttcgtag cggcaagccc
     1441 cgcctcgttg gagcgatcgg ctcgggctgg ctggctgacc ggatcggccg caaaacgctt
     1501 aatgctctca attttttggt acccggtttg caatttcatt gctggctttt cgcgcagccg
     1561 gacgacaaat gccggtccgg cccggcgtgg cccgcaccgt tcgagaaccg cgccatcggc
     1621 atcgggctgc agatgctcgg catcgacgga aaaccttgct gtaggacgag gcagccgcac
     1681 cttcgacgac gcgatgatca acaatccgat cttcttcacg aataccgtcg agcattacgt
     1741 gttcatcgaa gaattattcg ggcatgttgg cgtgcctccg ctgcccaacg aaacacccga
     1801 acaggcgaag gcgcgctttc accatttgct ccacgagtgg gtgacgggca tggggacgct
     1861 cgctcaggag gattgggcgt ggatgaactt ctcgcgttcc tgtcgttggc caaaattccg
     1921 tacatgaatt tgctgcctta cacctgttgg acgatgggcg ccgtccggca cggcgtttgt
     1981 gtcgcgaaag ttcgcatcgc gccggtgaag gaatttgccg accgtgtcga gcggcgggcg
     2041 atcgatgtca aatccgcgct gcaagttttc tgtctggcct ggtgatgcag tcagtcgaga
     2101 ctgccggccc tgacggagtc cgccaattta gcagaggcag ctatgaattc cactgtggcc
     2161 tgtgctgcat gttccgagcg gcggggccat atccgaagcg ttgccctctg ctggtgttag
     2221 gcacggcttt cgtggcgctg ggcacggcgg agcccggtgt tcgttgaccc cgacggtttg
     2281 ctcggatttg ctcgcgcgct aatcggcacg attttctttg cgcggcactc cacgtaaatt
     2341 tttactgcct gccgattttg catagtcgat atagcggcgc tctttcatag tcgccggcga
     2401 gcgcgatgct ttgcgaagat taggaaagcc accgaaattt tgaagcagga gaagcaaaca
     2461 tgaaaacggc gaagtctatt ccgcttgcgg gacttttcgg cgtggccatc gcactggcag
     2521 gcaccatcgc cgccttcggc caaagcgcgc cgacaccgcc ctcgatgaag acgatcggca
     2581 cgcccagtgc ggccgccaaa cctgagatcg tgccgtcgct attcgtgatg aattcccgcg
     2641 gagcgacgct acagagggat actctcgtgc tgatcggcgt gacgccgaat tccatcattt
     2701 tcgccgatcg cccggtgcgg tccgctggtc accagcccac cgccgacgtg atcgcagaat
     2761 ggggctcggg tgacgacagc tttgcaaaga acccgcccaa cgcaaccgtg tcagtccttg
     2821 gcaaggacgg ttcggtgaag gacgccgtgg tggttctgac gaatccgaaa cttgacggcg
     2881 acaagctgac tttcaacgtt cagatcctcg aaggcgatct cgccggcgcc gacggaccgg
     2941 ctgcggtttt catcgacatt atcggccggc cgctgacgcc gttgtcgttt gccggggttg
     3001 cacgccgctc ggcgtttcgc ggtgcaatgt atgccggcgc tgtaggagcg gctgcctacg
     3061 gtgcagctgc ctacgccgcg ccctattacc gcccatacgc gcccccggcc tgtggttact
     3121 acccttatcc accttgttac tgagatgagt gagcgtgtcc ggtgctggat caaggatcct
     3181 accgacttag tgcgggaatt tccgcaggca acaccagcgt ttagggagta cacgcgggtg
     3241 cattcccgcc gcaacttatg agggcgcgct actgtcggtc tcgattgtcg gcgtcacggc
     3301 gggccggcgc gctgggctgg ccgtgctgtg aagggatgag gaatgagaat attcctcatt
     3361 ttcgtctccg ctcgcccgac gcgaaacggc tgtgccgctc acggtggccc gatctgcata
     3421 gcgtgatcgg aagagaaggt cgaatttgca gacccgaacg gctcgcaata gtttgcaaga
     3481 aaccatgcaa tttttgccgg cctgacggca actttggcta ccgcctttaa cggacggagc
     3541 gagtgaatga cgcgcttggt gcttggactt cttcggccct atcggggctg gcttgcggtc
     3601 gtttttgtcg ccatgctact cgagattgct acgagtctgg cagcgccttg gccgctaaag
     3661 cttatcctcg acgacgcgct cggaaaacac aggctgcccg attggctggc ctgggctcac
     3721 gactacggct ttggacgcca cacacttggt gtcgcgctgt tcgcgggcgt cgctacgctg
     3781 gtcattgccg ttatcggtgc gatcgcgacc tatatcgaca actactacac cacaagcgtc
     3841 gggcagtggg tcgccaacga tctgcggatt cgcatttacg agcatctcca tcgtctttcg
     3901 ctgcgatttt acgacaccgc gaagaccggt gcgctgatgt caaccatcac cagcgacgtc
     3961 gcgacgatcc agagttttgc atcgtcatca acgctgagca tcatcgtgga catcatcacc
     4021 attgtcttca tgatcggctt gatgttctgg ctggattggg atttcaccct gatcgccctc
     4081 gccatcacac ccttcttgct gatggccgtc atgcatttca aaaaggccgt gaaggaagtc
     4141 acgcggactg tcagggccag gcagagcgaa atcgtcgccg ttgttcagga agggctgggg
     4201 tcggttcgag ccgtaaaggc atttggacga caagaccttg aaatcgctca tctcgaagct
     4261 gcgagtcacg ccacagtcga ggctgccctc agagcccggc aggtgaagtc gctgctgtcg
     4321 cctatggtca gcatcgtcgt cgcgatctgc acagctatcg tgctgtggag gggaacagcg
     4381 ctgatcgtcg cagggacgat gacagcaggc gctcttacgg tttatctcgc ctaccttgcg
     4441 aagttcttca agccggtcaa ggacctcgcg accatgacta gcgcgattgc acaaacgacg
     4501 gtcgcacttg aacgtatcca aaaaatactg tcggccgacg agatcattcg cgaacgccag
     4561 gatgcagccg atcccggccg ggtcaacggc gcaattgcct tcgagaacgt agcgtttggt
     4621 tacgatgatg agacgcaggt actgcgagat gtttcgttca aaatcgagcc cggccaggtt
     4681 gtcggcattg tcgggcccac aggttcgggc aaatcgacag tgttgagttt gctccctcgt
     4741 ttctatgatc ccagtggcgg acgaattcta attgatggcg ccgacgtcgc aacctttagg
     4801 ttggaatcgc tgcgagctca agtcggcttc gtgctgcagg aaacggtcct gttccgcggg
     4861 acaattcggg aaaacatcgc ttatggacgc cccggggcaa ccgacgaaga agtcgttgcc
     4921 gcggcgaagg tggcaaatgc cgacgaattc attggccgca tgccgcacgg ttacgacaca
     4981 gtagtcggtg aacgcggcga cacactttcg ggcggtcagc ggcaacgcat tggcattgca
     5041 cgcgccgtca ttcgcaacag cccgatcatg atcctggacg agcccacggc agccctcgac
     5101 accgagtcag aacacctcgt aattgatgcc ctgcgagaat tgatgaaggg ccgtacggtc
     5161 atcatgattg cccatcgcct aagcacaata agccaggcgg acaagattat cgttctcaaa
     5221 gatggcgttg tcgctgaaga aggctcgcac agcgaattac tcgctcgcaa cggcgtttac
     5281 gccgagcttc atcgcatcca gtacgaaacg gcggcggctg tacctgccaa tgcagcctag
     5341 cccttgaacg gattgtgccc tcgcccagga gcaagaaaat gtcgcatacg ctaatcgttc
     5401 ttccggacga tactatcagc gcaatccttg agccgatcaa tgccgccaag cgctcgttga
     5461 acatcaggat gtttctgttc accgaaccca cactgctgcg tgcggtgatc gcagccaagc
     5521 aacgtggtgt caacgttcgc gtcatgctaa atcctgcacg tcgcgatggc aaaagcgaaa
     5581 accaaaaggc ccgaaaagcg ctcctcgctg ctagcgtcaa ggtgcgcgat agcagcgctg
     5641 cctttgctct cacgcatcaa aagtcgatgg ttatcgacga caagataggc ttcgtagaat
     5701 ccctcaactg ggaacctcgt gacctgacgg agacccgcga ctatgcagtg acgacgacca
     5761 acaagagcga ggttaacgag atgataaggt gtttcgacgc cgactggtct cgaaaaccgt
     5821 tcaagcctga cccgaagtcg cacctgattt ggtgtcccaa taatgggcgc gagcgaatcg
     5881 caaccatggt cgacgaagca aaaaaaacac tgtggcttca aaacgagcgc tatcaggata
     5941 cggtcatcgt cgaaagactc gtg
//
LOCUS       DATILV010000585         3322 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2697655, whole genome shotgun sequence.
ACCESSION   DATILV010000585 DATILV010000000
VERSION     DATILV010000585.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3322)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3322)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3322
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2697655"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            98..580
                     /locus_tag="VLJ17_13580"
     CDS             98..580
                     /locus_tag="VLJ17_13580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015599457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSV24044.1"
                     /translation="MKVSKVNFIPKGYHAVTPYLCVKGAARAIEFYKKAFGAKEVMRM
                     PGPHGTIGHAEIQISNFRIMLADEHPEMNFRSPQAFGGTPVGINLYVKNVDAIAKRVV
                     AAGAKLLRPVADQFYGDRSCSVEDPFGHVWHIATHVKDVSPREMKKHAAALASGAEKA
                     "
     gene            598..954
                     /locus_tag="VLJ17_13585"
     CDS             598..954
                     /locus_tag="VLJ17_13585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008873468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HSV24045.1"
                     /translation="MKYMLLIYLDEKALSEPEREACYTESLKLAHEIHLNGKYLGANP
                     LQPTSMATSVRVREGKRLVTDGPFAETREQLGGYFLIEAKNLDEAIAVAGRIPMARKG
                     TVEVRPVIEIPGLPAA"
     gene            1071..1439
                     /locus_tag="VLJ17_13590"
     CDS             1071..1439
                     /locus_tag="VLJ17_13590"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HSV24046.1"
                     /translation="MKYMLLVHHDEAAFGKFSETKRQQMLEESVQLTHQLHADGKYLS
                     ASPLHGPSTAAIVRVRDGKRFVTDGPFVETREQIAGYFLIHAKDLDDAVSIAARVPGA
                     RIGTVEVRPVKEIAGLPADF"
     gene            1483..2670
                     /locus_tag="VLJ17_13595"
     CDS             1483..2670
                     /locus_tag="VLJ17_13595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013947824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exo-alpha-sialidase"
                     /protein_id="HSV24047.1"
                     /translation="MNGVRVLVGTRKGAFILTSDAKRERWDISGPHFTGWEIYHFKGS
                     PADPNRLYASQSSGWFGQIIQRSDDGGKTWHQPGTPPGEPTTTPEGMPKGESNKFVYD
                     TSPETGKPLTTHQWYDGTPHPWEFKRVWHLEPSLSDPDTVYAGVEDAALFRSTNGGQT
                     WQELSGLRGHGSGPHWQPGAGGMCLHTILLDPSNAQRIFVAISAAGAFRSDDGGKTWK
                     PINRGLHSQYIPDPTAEVGHCVHRIAMNRSRPSVLFMQKHWDVMRSDNAGDSWQEISG
                     NLPTDFGFVIDVHTQEPDTIYVVPIKSDSEHFPLDGKLRVYRSRTGGNEWEAHTKGLP
                     QSDCYVNVLRDAMAVDSLDKCGVYFGTTGGQVYASADAGDSWAPIVRDLPAVVSVEVQ
                     TLS"
     gene            complement(2876..>3322)
                     /locus_tag="VLJ17_13600"
     CDS             complement(2876..>3322)
                     /locus_tag="VLJ17_13600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013947824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exo-alpha-sialidase"
                     /protein_id="HSV24048.1"
                     /translation="HSQYIPDPNAEIGHCVHRIAMQPARPNVLFMQKHWDVMRSDDGG
                     DSWREVSGNLPTDFGFVIDVHAHEPETIYVVPIKSDSEHYPPDGKLRVFRSRTGGNEW
                     EALTKGLPQRDCYVNVLRDAMAVDSLDACGVYFGTTGGQVYASAGS"
BASE COUNT          738 a          945 c          995 g          644 t
ORIGIN      
        1 attgcgcgat aagtttcaac atggtcgacg tgctctccac aatcgccctc gatcgaataa
       61 cgctgttggt tcatatacga cttacaggag aatcaccatg aaagtctcga aagtgaattt
      121 cattcccaaa ggatatcacg cggtaacgcc gtacctgtgc gttaagggtg cagcgcgcgc
      181 cattgaattc tataaaaagg ctttcggcgc gaaagaagtc atgcgcatgc cggggccgca
      241 tggaaccatc ggccacgcgg agattcagat cagcaatttc cgcatcatgc ttgccgacga
      301 acatcccgag atgaactttc gcagccctca ggcattcggt ggaactccgg ttggcatcaa
      361 cctctacgtg aaaaatgttg atgcaattgc gaaaagggtc gtggctgcgg gggcaaaact
      421 gctgagaccg gtggcggacc aattctacgg cgaccggagc tgctctgtgg aagatccctt
      481 cgggcatgtc tggcatattg cgacccacgt gaaggatgtt tcgccgcgag aaatgaaaaa
      541 acatgcggcg gcgttggcgt cgggcgctga aaaagcatga aggaataaag gtaccctatg
      601 aagtacatgt tgctgattta cttagatgag aaagcattga gcgaacccga acgggaggcc
      661 tgttatacag aatccttgaa gctagcgcac gagattcact tgaatggaaa gtatttgggc
      721 gccaatccat tgcagccgac atcaatggcg accagcgtcc gcgtgcgcga gggtaaacgc
      781 ttggtaaccg atggcccttt cgctgagacc cgcgagcaat tgggcggcta cttcttaatc
      841 gaagcaaaga atctggacga agcgattgcc gtcgcgggac ggatccccat ggcgcgcaaa
      901 gggaccgtgg aagttcgacc ggtgatcgag attccgggtt tgccggccgc atagtaatgg
      961 ccgaattagc tgaataaaac ggcgaacgcg gatatgtcac agacatcagg actgctgtcg
     1021 attgtggact ctttcgaacg actactcgat atcgatggag gtatccccca atgaaatata
     1081 tgttgctggt tcaccacgac gaagcggcct tcggcaagtt tagcgaaacc aagcggcaac
     1141 aaatgcttga agaatctgtg cagctcacgc accagctcca cgccgacggg aaatatctga
     1201 gcgcttcacc tttgcatggg ccgtcgacgg ccgccatcgt tcgggtccgc gacggtaaaa
     1261 ggttcgtaac cgacggtccg ttcgtggaga cccgcgagca gatcgccggc tatttcctga
     1321 tccatgccaa ggatcttgac gatgccgtca gcatcgctgc tcgggtccca ggggcgcgca
     1381 tcggaaccgt cgaggtaagg ccggtaaaag agatcgcagg cctgcctgct gatttctaaa
     1441 agagatttta acgagaataa caacactaag aaggagtagg ttatgaatgg agtacgggta
     1501 ttggttggca cacgcaaggg cgcgtttatc ctgacgtcgg acgcaaagcg cgagcgctgg
     1561 gacatcagcg gtccgcattt cacgggctgg gaaatttatc atttcaaagg gtcacccgcc
     1621 gatccgaatc gattgtatgc gtcgcagtcg agcggttggt ttgggcagat cattcaacgc
     1681 tcggatgacg gcggcaagac ctggcaccaa cccggcacac cgcccggcga accaacgact
     1741 acgccagagg gcatgcccaa aggcgagagc aacaagtttg tttacgacac gtctcccgaa
     1801 accggcaagc cgctcaccac gcaccaatgg tacgatggca cgccgcaccc ttgggagttc
     1861 aaacgagtct ggcatctcga accatcgctg agcgatccgg acacggttta cgccggcgtt
     1921 gaagacgccg ccttgtttcg ctcgacgaac ggcgggcaga cgtggcagga gctttccggt
     1981 ctgcgcggcc acggctcagg gccccattgg cagccgggcg cgggtggaat gtgcctgcat
     2041 acgatcctcc tggatccgag caatgctcaa cgaattttcg tcgcgatctc ggcggcgggt
     2101 gccttccgca gcgacgatgg cggcaaaacc tggaaaccga tcaaccgtgg cctgcattcg
     2161 caatacatcc ccgaccccac ggcggaggtt ggccactgcg ttcatcggat tgcgatgaac
     2221 cgctcgcgac caagtgtgct gttcatgcag aaacactggg acgtcatgcg cagcgacaac
     2281 gccggcgact cgtggcagga gatcagcggc aacctgccca ccgacttcgg ctttgtcatc
     2341 gatgtgcata cgcaagagcc ggataccatc tacgtcgtgc cgatcaagag cgattccgag
     2401 catttcccgc tcgacggcaa gctgcgtgtg tatcgcagcc gcaccggcgg caacgagtgg
     2461 gaggcgcaca ccaagggcct gccgcaaagc gactgctacg tgaatgtcct gcgcgacgcc
     2521 atggcggtcg actcgctgga caagtgcggc gtatacttcg gcaccaccgg cgggcaggtg
     2581 tacgcgtcgg ccgacgccgg cgatagctgg gcgcccatcg ttcgagatct tccggccgtt
     2641 gtctcggtgg aggtccaaac gttgtcatga tccgagtcac gctaccggca cacctgcgca
     2701 agctcgccca agtcgaaggc gaggttatgc tcgacgtcga tggtccagtt acgcaacgct
     2761 cggttctcga cgcgctggag gtgagctatc cgatgttacg cgggacgatc cgcgatcatg
     2821 tcacgcaaaa acgtcgcgca ttcgtcaggt tcttcgcctg cggcgaagat ttgtctcatg
     2881 aaccggcgga ggcgtacacc tgcccgccgg tggtgccgaa atacacgccg cacgcatcga
     2941 gcgagtcgac cgccatcgcg tcgcgcaaca cgttcacgta gcagtcgcgc tgcggcagcc
     3001 ccttggtgag cgcctcccac tcgttgccgc ccgtccggct gcggaagaca cggagcttcc
     3061 cgtcgggcgg atagtgctcc gagtcgctct tgatcgggac gacatagata gtctcgggct
     3121 catgcgcatg aacgtcgatc acgaatccga agtcggtggg cagattcccg ctgacttcgc
     3181 gccacgagtc gccgccgtcg tcgctgcgca tcacgtccca gtgcttctgc atgaacagca
     3241 cgtttggccg cgcgggctgc atggcgatgc ggtggacgca gtgcccgatc tcggcgttcg
     3301 gatcgggaat gtactgtgag tg
//
LOCUS       DATILV010000586         7612 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2442048, whole genome shotgun sequence.
ACCESSION   DATILV010000586 DATILV010000000
VERSION     DATILV010000586.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7612
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2442048"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(50..754)
                     /locus_tag="VLJ17_13605"
     CDS             complement(50..754)
                     /locus_tag="VLJ17_13605"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV24049.1"
                     /translation="MLELIGGGEANVQALDHVNEVFVVDDNDEYRELLAAILELEGHN
                     VVPFQEGTSFLKQAAARTPVCVFLDVIMPGPSGIEILKRLNAKSFAAPIFLISGRNES
                     AVVVEAMKYGAQDFIEKPFDPYTAVLRVRDAVDIWNRRAEKTLKPELLPPRVHSGIRL
                     SRMERDVLTHIIAGSDNIEVSKLLGISKQSVATHRWRITKKFGARNSADLVRIVMSNM
                     QSYSGPAVETGTYPQA"
     gene            1446..3794
                     /locus_tag="VLJ17_13610"
     CDS             1446..3794
                     /locus_tag="VLJ17_13610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015342623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HSV24050.1"
                     /translation="MAKFGIGQAVRRVEDQRFLLGQGRYADDIRLPGECHGVTVLSPH
                     AHALVKRLDISKAMSAPGVLCVLTGADAVADQLGALTAHLMPEDFGAPKGHRTFQPLL
                     VTDKVRCVGDRVAFVVAETLAAARDAADRIAVDYEALPAVTNLEDAAKKGAPKVWEDN
                     ANGNVAFRLIFGSQEATDAVFAKAKHVVKLRVENNRLSPASMEPRVAIGDFNAAEDFY
                     TLHTASQNPHGARTELSHIFHRPENRIRVVSPDVGGGFGLKGGIFPDDGLVMWASRKL
                     RRPVRWVASRGESMQTDHHGREMIYYGELALDEHGKILGLRSTSLFQMGAYFVGAALA
                     AGAFSLRFVPQAYDIQVMHVTSQGLFTNTSQSGPYRGAGRPEAAYFMERLIEHAAHVI
                     GMEPAEIRRRNLIPPSKLPYTTPTHWVYDSGEFSRVMDSCIEASDPKGYAARKKATET
                     RGKLRGRAVSFYIEFGGIFNERMDLRFDPSGALSIFGGTHSHGQGHATVFAQLVHEWL
                     SVPFESIRYVQGDTAQVAIGRGTYGARSMVVGGNALKAAADEIVERGKRLAAELLEAD
                     VSDLVFEDGQYRVTGTDKIISIVDVAKASYAPMGPLTEKFGVGLEATGSYSANPPSHP
                     NGSHACEVEVDPETGVVTIDRYHVVDDLGRVINPMIVRGQIQGGVVQGIGQALMEHHV
                     YDRESGQLLTGTFMDYAMPRAVDLPNIDANMEEVACQTNPLGVKGIGESGTIGAPPTV
                     INAVIDALRPLGVEQIDMPATPLRVWETIQRARAKQATRLTS"
     gene            complement(3805..4752)
                     /locus_tag="VLJ17_13615"
     CDS             complement(3805..4752)
                     /locus_tag="VLJ17_13615"
                     /inference="COORDINATES: protein motif:HMM:NF012451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HSV24051.1"
                     /translation="METLYDLLGARPHDDAERLKNAFRNAVKANHPDLHAGDPGASMR
                     FRQIVSAYAILRRAEQRAAYDRLLEFQREELRSKSSRIICDIISYTKCNIISDAIAVI
                     SLTVVMASGYTLFTHASKTFEAVKAAEVTIAATLSESRVWARDKLARAGVPNMLIVPS
                     AVASEVNGDDAQGIAKSGPAPSSTGPDTQVSKMTDAFSAVSNPADAKAIAEHLKKNYG
                     IEALDQNKERLVGVQFSSLKRHNGVAKSPSPDLAISDKKHDLKISSKPRIVAKRQPTN
                     HLSFKQAPLENKSMLACSGFQSCSNTRRLFSVSEHVALR"
     gene            5345..5515
                     /locus_tag="VLJ17_13620"
     CDS             5345..5515
                     /locus_tag="VLJ17_13620"
                     /inference="COORDINATES: protein motif:HMM:NF019009.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system CcdA family
                     antitoxin"
                     /protein_id="HSV24052.1"
                     /translation="MNINISDTLEQHLRGLVRAELERRWLEENQEAIARHNSRVAEHS
                     LLSNVAALLQRP"
     gene            5598..5822
                     /locus_tag="VLJ17_13625"
     CDS             5598..5822
                     /locus_tag="VLJ17_13625"
                     /inference="COORDINATES: protein motif:HMM:NF013965.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008657 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) inhibitor activity
                     [Evidence IEA];
                     GO_process: GO:0006276 - plasmid maintenance [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CcdB family protein"
                     /protein_id="HSV24053.1"
                     /translation="MAPLEVAGSGQFADRLNPAVTIDDRQFVLIAQELVTVRQELVTV
                     RKSVRGAAHGSLGHERDHIIAALDMLFAGL"
     gene            complement(5780..6538)
                     /locus_tag="VLJ17_13630"
     CDS             complement(5780..6538)
                     /locus_tag="VLJ17_13630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HSV24054.1"
                     /translation="MITIRSMLFNLLFYLNLVILLVAAVPTLVLPRRAILGMAKLWGH
                     TTLWLLRVVCRIDVEWRGLEKIPPGGIIVAAKHQSIWETFALITLFRDPTFVIKRELL
                     WIPFFGWYAWHGGMIPVDRGAGKAALSGIAVHARKALAEGRQIIIFPEGTRRPAGADP
                     KYKFGVAHLYGEAGVPCVPIALNSGLFWPRRRFLRFPGTVRVEILDPIPPGVDRNTVF
                     ARLQDEIEAATARLITEGLQDHNPANSMSSAAMM"
     gene            complement(6551..7138)
                     /locus_tag="VLJ17_13635"
     CDS             complement(6551..7138)
                     /locus_tag="VLJ17_13635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HSV24055.1"
                     /translation="MAFAVLFGGFVWFAFHIAGKELPLDRMADGIVALTGGPSRITDA
                     VELLASGRGQRLLITGVAPTTKTAELVRLVPDHERWFGCCVDLDYTAVNTIGNAVETR
                     RWALARGFRSLVVVTSGYHMPRAMLEIGHRLPDVTLIPFPVVTERRAEPWWSNVGTAK
                     ILVFEYLKFVAAAIRIGLEPAPAATEVAHRDRAKI"
     gene            complement(7297..>7612)
                     /locus_tag="VLJ17_13640"
     CDS             complement(7297..>7612)
                     /locus_tag="VLJ17_13640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV24056.1"
                     /translation="VEVLHFVGAKEAYIATQFQRHFLWLGLKGGALGGGAAIVSLILI
                     GRVSDLFVGTAGEAEAAALFGRFSLGFMGYVVVAAEVGLIAAITALTSRHVVIHTLRN
                     ID"
BASE COUNT         1645 a         2217 c         2227 g         1523 t
ORIGIN      
        1 gaattaaaat ttacgaaaag tccgctgggt aagcgaccct cttgcgattt cacgcctgtg
       61 gatacgttcc tgtttcaacc gcaggccctg aatatgattg catattcgac atgacgatac
      121 gaacgagatc agcagaattc ctggcgccga acttcttcgt gatacgccag cggtgggtcg
      181 cgacgctctg cttgctgatg ccgagcaatt tgctgacctc tatgttgtcg ctccctgcaa
      241 taatgtgcgt tagaacatcg cgctccatgc gcgagagccg gataccacta tgcactcgcg
      301 gcggcagaag ttccggcttc aaggttttct cggcgcggcg attccatata tcaactgcgt
      361 cgcgcacccg cagcactgcc gtgtagggat cgaatggttt ttcgataaaa tcctgggcgc
      421 catatttcat ggcttcgacc acgactgcgc tttcatttcg tcctgaaatc aagaagattg
      481 gcgccgcaaa gctttttgca ttgagcctct tgaggatctc gatacccgac ggtcccggca
      541 tgatgacgtc gagaaaaaca cacacaggcg tccttgctgc tgcctgcttc aggaacgatg
      601 tgccttcctg gaacggaacg acgttatgtc cttcaagctc gaggatcgcg gcaagcagtt
      661 cacgatattc gtcgttgtcg tccaccacga agacttcgtt gacatggtct aaggcctgca
      721 cgttcgcctc accgccaccg ataagctcaa gcattgtttc tctccgacac aaaccaacgg
      781 atttcaagtg atcgtcgtcc ggtgaaccgg cgtttgtcgg aaacgtttcg cgtccttggc
      841 cgtgatggcg gctgcgttaa ctctcctgca actgcctggc gccgtggaaa gttcctcttg
      901 gccggacgat cgcctgcaaa agcgaatcat ggcgaccgca gcaacgaggt tagaagcccg
      961 atattgcgaa agcgttaagt tcttgatttg cattgagatc agatcgatac aagtgtaaca
     1021 atcgagaaaa tgccgggttc gctcgttaat ccattcgaaa cgcctacgac tacctacgtg
     1081 cacggttaaa cgaattgcag ctcgtcaatt cgatcggcat gtggtcgcca gcagcaacgc
     1141 caaccgttcc gtgtctctgc agatatacaa atcaagtgcg acgcgccgca gcgtggtgca
     1201 agcgaatgtt ggctgagcgt cagagctttt cgcgacttcg atgagggcag cgttaagcgc
     1261 ttgcaggacg gtccttgcga gatgcaagaa agccgcacca ggtcgcgatg cgacagtcgg
     1321 tctgtctgga cacgatttgg cttaccgaat ttcggcctta gggtagttgt catattgtgg
     1381 gcaacacaat gacgagctca ccagttgcct gagcaacggg acgatcgctg gcggcaggat
     1441 aaacaatggc caaattcggg attggacagg cggtgcgcag ggtcgaggat cagcgtttcc
     1501 tgctagggca ggggcgctat gctgacgaca tcaggctgcc aggtgaatgc cacggggtga
     1561 ccgtgctgtc tccgcatgcc cacgcccttg tcaaacgctt ggacatatcc aaggccatgt
     1621 cggctccggg ggttctttgc gtgctcaccg gcgccgatgc agtcgccgac cagctcggtg
     1681 ccttgactgc gcacctgatg cctgaggatt tcggggcacc caagggacat cgcaccttcc
     1741 agccgctgct cgtgaccgac aaggtccgtt gcgtcggcga ccgcgtcgcc ttcgtggtcg
     1801 ccgaaacgct cgccgcagcg cgtgacgccg ccgaccgcat cgcggtcgat tatgaggcgt
     1861 tgcctgctgt gacaaaccta gaagacgccg cgaagaaggg cgcgcccaag gtctgggagg
     1921 acaacgccaa cggcaacgtg gcgtttcgat tgatcttcgg cagccaagag gctaccgacg
     1981 cggtgttcgc caaggccaag cacgtggtga agctcagggt cgagaacaac cgcttgtcgc
     2041 cggcatcgat ggagccccgg gtcgccatcg gcgacttcaa tgcggctgag gatttctaca
     2101 cgctccacac cgcttcccag aacccccacg gcgcgcggac ggagttgtcg catatcttcc
     2161 accggcctga gaaccgcatc cgcgtagtgt cgccggatgt cggcggcggc ttcgggctca
     2221 aaggcggtat cttcccggac gacggcctgg tgatgtgggc gtcgcgcaaa ttgcggcggc
     2281 cggtgagatg ggtcgcgagc cgcggcgaaa gcatgcagac ggatcatcat ggccgcgaga
     2341 tgatctatta tggcgagctt gcactcgatg agcacggcaa gatactgggc ttgcgcagca
     2401 cgagcctgtt ccagatggga gcctatttcg tcggcgcggc gctggcggca ggtgcgttct
     2461 cgctgcggtt cgtgccgcag gcttatgaca tccaagtcat gcacgttacg tcgcaaggct
     2521 tgttcaccaa cacctcgcag agcggtccct atcgcggtgc cggccgtccc gaggccgcgt
     2581 atttcatgga gcgcctgatc gagcatgcgg cacatgtgat cggaatggag ccggccgaga
     2641 tccgccgccg caatctcatt ccgccgagca agctgcccta cacaacgccg acgcactggg
     2701 tctacgacag cggcgaattt agtcgcgtga tggacagctg tatcgaggcg agcgatccga
     2761 agggatacgc ggcacgcaag aaggctacgg aaacgagggg taaactacgt ggccgcgccg
     2821 tcagcttcta tatcgagttt ggcggcatct ttaacgaacg catggacttg cgcttcgatc
     2881 cgagcggcgc gctgtcgatc ttcggcggca cccattcgca cggccagggc catgcgaccg
     2941 tattcgccca actggtacac gagtggctca gcgtgccgtt cgaatcgatc cgctatgttc
     3001 aaggcgacac ggctcaggtg gcgatcgggc gaggcaccta cggggcgcgc agcatggtgg
     3061 tcggcggcaa tgccctcaaa gctgcagccg acgagatcgt cgaaaggggc aagaggctcg
     3121 cggccgagct gttggaagcg gatgtcagcg atctcgtgtt cgaggacggc caatatcggg
     3181 tcaccggaac cgacaagata atttccattg tcgatgtcgc caaagcctct tatgcgccaa
     3241 tgggtccact gaccgaaaaa ttcggcgtcg gccttgaggc caccggtagc tatagcgcga
     3301 acccgccgag ccaccctaat ggctcgcatg cctgcgaagt ggaggtcgat ccggaaaccg
     3361 gagtggtaac gatcgaccgc tatcacgtgg tcgatgacct cggccgcgtc atcaatccaa
     3421 tgatcgtccg cggccagatc cagggcggcg tagtacaagg catcggccag gcgctgatgg
     3481 agcatcacgt ctacgaccgc gagagtgggc aattgcttac cggcacgttt atggattacg
     3541 ccatgccgcg cgccgtcgat ctgccgaata tcgatgcaaa catggaagaa gtcgcctgcc
     3601 aaaccaatcc cctcggcgtc aagggaattg gagaatccgg caccatcggc gcgccgccga
     3661 cggtcatcaa cgccgtgatc gatgcgttgc gtccgctcgg cgtcgaacag atcgacatgc
     3721 ctgcgacacc gctacgggta tgggaaacga tccagcgggc aagagccaaa caagcaaccc
     3781 gactgaccag ttgatcaagt tgagctatcg cagcgcaacg tgttccgaga cggaaaatag
     3841 tctacgcgtg ttcgaacaag attgaaagcc ggagcaggcc aacatagatt tgttttcgag
     3901 cggggcctgt ttgaaagaaa ggtggtttgt gggctgccgt ttcgcaacta ttcgcggttt
     3961 tgaggatatc ttcagatcat gttttttatc ggatattgcg agatcaggcg aaggcgattt
     4021 tgcaacgccg ttgtgtcttt tcagggagga aaactggact ccaactaatc gttccttatt
     4081 ttgatcgagc gcctcgatcc cgtagttttt cttaagatgc tcggcgatgg ccttggcgtc
     4141 agcggggttg ctcacggcgc tgaaagcgtc cgtcatcttg ctgacctgag tatctggccc
     4201 agtcgaactc ggagctggcc cgcttttggc tatgccctgg gcatcgtcac cattcacctc
     4261 cgatgcaacg gcgcttggca cgatcaacat gttaggtacc cccgcacgcg cgagcttgtc
     4321 gcgtgcccag acacgcgatt cactcaatgt tgcggcgatc gtaacctcag ccgccttgac
     4381 cgcttcaaac gtctttgaag cgtgcgtgaa caacgtatat ccactagcca ttacgaccgt
     4441 gaggctgatt acagcgatcg catcggagat gatgttgcac ttcgtgtagg agataatatc
     4501 gcagataatg cggcttgatt tcgagcgaag ctcttcgcgt tggaactcca gtagccgatc
     4561 gtaggccgcc cgttgctcgg cgcgacgaag gatggcgtag gcactcacaa tctgtctgaa
     4621 ccgcatcgaa gcacctggat cgccagcatg gagatcaggg tggtttgcct tgacggcatt
     4681 gcggaatgcg ttcttgagcc tctctgcatc gtcgtgcgga cgagcaccga gcagatcata
     4741 aagagtttcc atgtgtacgc tctcgggtaa ttcttcccga tagtcacgag ctcttcagca
     4801 cgtaaatcaa agctttggta gagcagtgca acgggcagtg acgttgtcgt gttaggttgt
     4861 gactgcatca caacctaatg aggccgcggt gatagcccga cgggctttgg ctgacatcac
     4921 cagttgagtc cgagcgaatt taaagtagcg atcgttcgac ttccctgtca atggtatgca
     4981 ccatgagaat ccacaaggac gttggtgacc aagaaagcgg caatccgtga ttgatcccgc
     5041 aagggacgaa acgagccgga ctaagccgta gcgggcgtcg cgaaccatcg caacgccacg
     5101 tagtcggacc aattagaatc cgggaaatat tctacgcccg tcatggatcg cagctcgctg
     5161 gcattcatcc aaggtcattg ccgtcctcgg acttgatcgc gagaaaatcc cgggtaggcc
     5221 gatgtgtcgg cctacccgct gaccgtctgc gccagcgcca acgcttgaac gagctcccgg
     5281 cagctcaaga agcgcgccgt caatctcttc gtcgatgtcg aattgcttga cgaggcgcgg
     5341 cgtaatgaac atcaacatct ccgacacgct ggagcagcac ttgcgcggcc tcgttcgggc
     5401 ggagttggaa cggcgttggc tggaggagaa ccaggaagca atcgcgcgcc acaatagtcg
     5461 tgttgctgag cacagcttgc tttcaaatgt tgccgcccta ttgcaacgac catgaacgaa
     5521 ttggacattc acgccacctc gttcccgcgc agcctggaac gccagccgtt tcttgttcgc
     5581 gaagcctgga tacggtggtg gcgccactcg aggtcgctgg cagcggccaa tttgcagatc
     5641 gcctcaatcc tgcggtcacg atcgacgatc gacagttcgt gctgatcgcg caggaacttg
     5701 tgacagtgcg gcaggaactt gtgacagtgc gaaagagtgt acgcggcgcg gcacacggtt
     5761 cgcttggtca cgagcgcgat cacatcatcg cggcgctcga catgctgttc gccggattgt
     5821 gatcctgcag gccttccgtg atcaaccgtg cggttgcggc ctcgatctca tcctgcagcc
     5881 tagcgaaaac cgtgttccga tcgacacccg gcggaatcgg gtcgaggatc tccacccgca
     5941 cagtgccggg aaagcgcagg aagcggcgcc gcggccagaa caggcccgag ttgagggcga
     6001 tcggcacgca ggggacgccc gcttccccat agaggtgggc gactccaaac ttgtatttcg
     6061 ggtcagctcc ggcgggcctg cgcgtgcctt caggaaaaat gatgatctgc cggccttcgg
     6121 cgagcgcttt gcgggcgtgc accgctatgc cggaaagcgc agccttgccg gcaccgcggt
     6181 cgaccgggat catgccacca tgccaggcgt accaaccgaa aaaggggatc cacagcaact
     6241 cgcgcttgat cacgaaggtg gggtcgcgaa acagcgtgat cagcgcgaaa gtctcccata
     6301 tcgactgatg cttggcggca acaatgattc cgcccggcgg gattttttca agcccgcgcc
     6361 actcgacatc gatgcggcat acaacgcgta acaaccacag ggttgtgtgc ccccacagtt
     6421 tggccatccc gaggatggca cggcgcggca gcacaagcgt tggaacagcc gcaaccaaca
     6481 agatcacaag atttaaatag aataggagat tgaacagcat cgatcgaatc gtaatcacgc
     6541 ggcactctcg tcagattttg gcgcggtcgc gatgcgcaac ttcggtcgcg gccggtgccg
     6601 gctcaagccc tattcgtatc gccgccgcaa caaatttcag atattcgaaa acgaggattt
     6661 tcgctgtgcc cacattggac caccacggct cggctcggcg ctcggtaacg accggaaacg
     6721 gaatcagggt cacatcaggg agccggtgac cgatctccag catggcgcgc ggcatgtggt
     6781 agcccgatgt caccaccaca agcgagcgaa acccgcgtgc cagtgcccag cgcctcgtct
     6841 ccaccgcgtt gccgatggtg ttgacggcag tatagtcgag gtcaacgcag cagccaaacc
     6901 atcgctcatg atcaggcacc aagcgaacaa gctcggccgt tttggtggtt ggagcaacgc
     6961 cggtgatcaa gaggcgttgc cctcgtcctg aggccagcaa ttcaactgca tcggtaattc
     7021 gtgacggccc cccggtcagc gcaacgattc cgtcggccat acgatcgagc ggcaactcct
     7081 tgccggcaat atggaacgca aaccacacaa acccgccgaa caaaactgcg aaggccatca
     7141 gcggcgcgat gcatacgcgc accaacattc ggcggcgtgg tcgaggcttc cggtgccggc
     7201 ggccgtccgg gtccgttacc ttatttggct ggtccttcac catcatgaat catcgaccac
     7261 accagaatat tgccagattt gacgcccgca taatacctag tcgatgtttc tcaaggtatg
     7321 gataacaacg tgccgcgacg tcagtgccgt gatagcggca atcagcccca cctcggccgc
     7381 aaccactaca taacccatga aacccaagga aaagcggccg aacagcgcgg cggcctcggc
     7441 ctccccggcg gtgccgacga agagatcgct aacccgcccg atgaggatca ggctcactat
     7501 ggcagcgcca cctccaagcg caccgccttt aagacccaac cacaggaaat ggcgctggaa
     7561 ctgggtcgcg atataggctt ccttggcgcc gacgaagtgc aatacctcca cg
//
LOCUS       DATILV010000587        15592 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_910820, whole genome shotgun sequence.
ACCESSION   DATILV010000587 DATILV010000000
VERSION     DATILV010000587.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 15592)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15592)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15592
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_910820"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..769)
                     /locus_tag="VLJ17_13645"
     CDS             complement(<1..769)
                     /locus_tag="VLJ17_13645"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HSV24057.1"
                     /translation="MTKPVNWLWPNGKRTAVVFNLCLEAWSDGKAPGISPMGNPLPAG
                     VLDTMAISWAGYGVKRGIYRLLDGLRRHRAVASVMVNAVIAERSPETIKAIADAGHEV
                     LSHSYAMDIIPALLDDDDESRNIARCTALLEKASGRTIEGWLSPRGTSRSETPRLLAE
                     AGYRWYGDVFDDDLPYIQTFGNNRIVAIPLGTDVNDMQFMKYGNSPKTMLESFNENIA
                     IAKEKGELSIIDVTCHAHIFGRPRGAYYFEQIVEAATV"
     gene            complement(920..1384)
                     /locus_tag="VLJ17_13650"
     CDS             complement(920..1384)
                     /locus_tag="VLJ17_13650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSV24058.1"
                     /translation="MRIIQGDLSDPRVADLLRIHLTNARAQTAPGSAHALDASGLQLP
                     DTSFWTIWEDEMLLGCGALKRLSTDHGEVKSMHTAQSMRRRGVGSAMLHHIIATARAS
                     GMSRLSLETGSWEYFRPAHALYRNHGFVECPPFADYVLDPNSVFMSLDLRGT"
     gene            1478..2017
                     /locus_tag="VLJ17_13655"
     CDS             1478..2017
                     /locus_tag="VLJ17_13655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylase"
                     /protein_id="HSV24059.1"
                     /translation="MDNTNGARARPWYEVVQQTLKRNDVKLVTYVPDKVFIPLIKNLH
                     ADVDFLTFPTAREEEALGIVSGAWMGGQRGAVLMQTSGFGTIANVLASLVVPYQVPAI
                     MFVSERGTLGEFNLGQALVCRTMRPVLESLAVQTHTIARHDELEFIVDRSIKQAVATQ
                     AAVAFILSPLLTGGKVSEA"
     gene            2040..2660
                     /locus_tag="VLJ17_13660"
     CDS             2040..2660
                     /locus_tag="VLJ17_13660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015687299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSV24060.1"
                     /translation="MPNAASTVASYDNAKVVNRFNLTKRLVARLKHEEAVIGGIGNTN
                     FDLWSAGHRPQNFYMLGSMGLAIPIAFGVALAQPKRHVIALEGDGSLLMQLGCLTTIA
                     TQSPKNLTMVIMDNGLYQITGGQRTPAAGTADYVALARAAGLSKCAWAGDEEDFDKLI
                     DAALAEDGPTFIAARIDDKPGVGTTDRDPVQIRERFMMGLGVRRRV"
     gene            complement(2668..4119)
                     /gene="boxB"
                     /locus_tag="VLJ17_13665"
     CDS             complement(2668..4119)
                     /gene="boxB"
                     /locus_tag="VLJ17_13665"
                     /EC_number="1.14.13.208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA];
                     GO_process: GO:0010128 - benzoate catabolic process via
                     CoA ligation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="benzoyl-CoA 2,3-epoxidase subunit BoxB"
                     /protein_id="HSV24061.1"
                     /translation="MPMDLFNVDYSTKIPNNVGLTEDRRILRALEGWHPGYLTWWQDM
                     GPEGFQEALVYLRTAVSVDPKGWAKFDYVRMPEYRWGILLAPQEYNRTIAFGRHFGEP
                     VWQDVPGEYRAMLRRLVVIQGDTEPASVEQQRHLGKTAPSLYDMRNLFQVNVEEGRHL
                     WAMVYILHKYFGRDGREEAEELLRRRSGSADAPRMLGAFNEQTPDWLSFFMFTTFTDR
                     DGKMQLESLAQSGFDPLSRTCRFMLTEEAHHMFVGETGISRIVQRTCEAMTAAGIDDP
                     ANIRKVRSLGVIDLPTIQKKLNLHYTLSLDLFGSEVSTNAANSFNASLKGRFHETRID
                     DDHRLENATYPVLKLVGDKIKRVDEPALTALNMRLRDDYATDCGKSVERWNKTIEKAG
                     VAFRLQLPHVAFHRQIGEFRDACATPDGELIDPAAWAQQKDQWLPSKADGDFIADLMK
                     PMREPGQFAGWIAPPKVGIDNKPGDFEYVKIAA"
     gene            complement(4143..5834)
                     /gene="boxC"
                     /locus_tag="VLJ17_13670"
     CDS             complement(4143..5834)
                     /gene="boxC"
                     /locus_tag="VLJ17_13670"
                     /EC_number="4.1.2.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_process: GO:0010128 - benzoate catabolic process via
                     CoA ligation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-epoxybenzoyl-CoA dihydrolase"
                     /protein_id="HSV24062.1"
                     /translation="MTETAQKLANGLARIDFATDPSRYRHWKLNVDGRVVTLVLDVDE
                     KGGLFEGYDLKLNSYDLSVDIELADAFERIRFEHPEVRVVLLRSGKPRVFCAGANIRM
                     LAGASHAHKVNFCKFTNETRNAIEDASISSGLRTICVINGTAAGGGYELALAADHIIL
                     VDDGSSSVSMPELPLLAVLPGTGGLTRITDKRKVRRDRADFFCTTEEGIKGKRAVEWR
                     LVDEVTPNSQLETIIATRAREFAGYIEETTVGSGIVLAPLKRSITADRRDYAYVSVTF
                     DRAGRIATIALRGPDTPCPASAQEMTNQGASFWPLQIARELDDAILDIRLNELDVAAI
                     VFKSEGEPRAVVDYDIFLDLHGRHWLAREIRLKWKRVLKRIDLTSRSLVVLIEPGSCF
                     AGTLAEIVFAADRSYMLIDRPEGDNRPPAAIVLGEVNLSKTLAMSNGLDRLSTRFLGE
                     PVAHDKARQAIGQVLDAKAAEGLGLVTFALDDIDWDDEIRLFLEERASFSPDSLTGLE
                     ANLRFGGPETMETKIFARLSAWQNWIFQRPNATGEAGALSRYGSGRKPEFDTKRA"
     gene            complement(5980..6768)
                     /locus_tag="VLJ17_13675"
     CDS             complement(5980..6768)
                     /locus_tag="VLJ17_13675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV24063.1"
                     /translation="MNLAADGFIEIGSSRLEYKMVGPHPREAATFVLLHEGLGSVGIW
                     GDFPARLADTTGFGVFAYSRAGYGRSTPATMPRRMTFMHEEARDVLPHVLDAIGLQRG
                     ILLGHSDGASIAAIYAGSTEDHRVRGLVLLAPHFFTEEFGIAEIARMREAYETTDLRV
                     KLGKWHQNPDNAFHSWSGPWLDPGFREWEITEELAYIRVPILIIQGTDDQYGTLRQIE
                     IAKEECYCPVEAVILAGTRHVPHREAPHATMGAIIDFTRRLQIE"
     gene            complement(6779..7495)
                     /locus_tag="VLJ17_13680"
     CDS             complement(6779..7495)
                     /locus_tag="VLJ17_13680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV24064.1"
                     /translation="MARPALLEIENIETRYGRSQVLFGISLTIAAGEVVSLMGRNGMG
                     KTTTVRSIIGLTPAITGAIRFNGTDIRRLPPYRVAQHGIGLVPEGRQIFPNLTTRENL
                     LATASNRCSLSEPWTLEKVEAMFPPLAERATAMGRQLSGGEQQMLAIGRALMTNPRLI
                     ILDEATEGLAPLIRDEIWRCLTALKQAGQSILVIDKNVEALIEIADRHYIIERGRIAW
                     SGTSRELAAAPVVQHRYLGI"
     gene            complement(7488..8252)
                     /locus_tag="VLJ17_13685"
     CDS             complement(7488..8252)
                     /locus_tag="VLJ17_13685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018260107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV24065.1"
                     /translation="MTDPMLQIRDLTKRFGGVLASDSISLDVPAGELHAIIGPNGAGK
                     STLIGQLAGEIVPEKGRIFFHGRDITRMPTHRRSALGLARSFQITSLFLDFTVLDNVA
                     LAVQAHAGHSFRFWRPARSEAELRVPAQSALARVGLENRADVICANLSHGEHRQLEIA
                     MALATAPRMLLLDEPMAGMGADESARVIGLLGELKREQTILLIEHDMDAVFRLADRIT
                     VLVDGRVIASGPPDVIRADAEVRQAYLGSAKARRHG"
     gene            complement(8245..9192)
                     /locus_tag="VLJ17_13690"
     CDS             complement(8245..9192)
                     /locus_tag="VLJ17_13690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018456041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSV24066.1"
                     /translation="MSAIFTARNLVIGALLVFLALLPVYAVATGQFFPLTLFTRIVIL
                     ALAATSLNLILGYGGMVSFGHAAYLGLGGYVVGIMAKEDITSGFAQWPLALAVCALFA
                     LVVGALCLRTRGVYFIMITLAFAQMIYYVAVGLDRYGGDDGLTIYRRSQFASLIDLSG
                     KVQFYYLCLALLLAAIWFVSRLINSRFGMVIQGSRSNERRMRAIGFPILRYRLASFVI
                     AGMMCGLAGALLANHTDFISPAVMHWTRSGDLIVMIVLGGMGSLFGPLIGATTLLMLE
                     EGLSRVTEYWQIIVGPLLLFIVVYAHGGIDGILASLHRD"
     gene            complement(9189..10106)
                     /locus_tag="VLJ17_13695"
     CDS             complement(9189..10106)
                     /locus_tag="VLJ17_13695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSV24067.1"
                     /translation="MILLIEQCLNGLQFGLLLFLLAAGLTLVFGIMDVVNLAHGSFYM
                     LGAYFAATFAALTESFVLGAVLALAATLAVGMAVELIAIRKLYGRDHLDHVLGTFGLI
                     LFFNELVRLVWGPAGMNLPLPPFLSASVEILPDVHYPAYRLAIIVAALAVALTLYIVV
                     MHTRVGMLIRAGASNREMVGALGINIQLLYTLVFGVGAALAGLAGLIQAPILTAQIGM
                     GENILIVALVVIIIGGIGSIRGAFIAAIFVGLVDTVGRAFLPELFRLVMTPAAASALA
                     PALSSMLIYLLMAVVLVWQPQGLFPVDGK"
     gene            complement(10103..11242)
                     /locus_tag="VLJ17_13700"
     CDS             complement(10103..11242)
                     /locus_tag="VLJ17_13700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV24068.1"
                     /translation="MACLSVSALAQQKSIKIGFVSTFSGPTAVIGNDMRNSFDLALDH
                     LDRKIGGLPVEVIYEDDQQKPEVGKQKTEKLIESDHVDFIVGYIWSNVLLASFKPAID
                     SKTIIVSANAGPSQIAGELCSPYFFSTSWQNDQTPAAVGLYMNQKGVKNAYLIGPNYA
                     AGKDMLTGVKATFKGKIIGEEYTRWPDQLDFSAELSKVRAAKPDAVFVFYPGAAGVQF
                     LNQYVQAGLKSQIPLYTAFTIDETTLPRQGENAIGIPGAQQWVNDLPNDANKKFVADY
                     KAKYKTAPSFYGAQTYDAANLVNSAVIAVKGDVAKKTDMIKAMEKADFASVRGSFRYG
                     NNHFPIQSFYLQDVVREPDRALVLKTVATIVKDDQDGFHDKCAMK"
     gene            complement(11298..12890)
                     /locus_tag="VLJ17_13705"
     CDS             complement(11298..12890)
                     /locus_tag="VLJ17_13705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016405 - CoA-ligase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="benzoate-CoA ligase family protein"
                     /protein_id="HSV24069.1"
                     /translation="MGETSASFSAVNTADAIPRVYNFADDILRRNLAAGRAGKPAFID
                     PRGSWTYGQLAERVLRFGHVLRNLGIAREDRILLCLTDTIDWPTAFLGAVKAGVVAVP
                     VNTLLHENDYRFMLNDSRAKLLVVSEELYPRFASLIGSCPDLATVIVSGTDGCGHSRL
                     EDLLQSASGPDYTAATTRDDMCFWLYTSGSTGQPKGAVHVHANPRLTADLYGEPVLGL
                     TENDLVYSVAKLFFAYGLGNSMSCPMATGATTVLMPARPTPDAVADLLRRHPVTVFFG
                     VPTFYAAFLASERATARTELKLRTCVSAGEALPVDVGRRWSERYGVDIIDGLGSTEML
                     HIFLSNRIGDVRYGTTGKPVTGYDIRLVSDDGAVVKRGELGELQVRGPTSAIMYWNNR
                     DQSRTTFLGEWTRSGDKYIEDKDGYYLYCGRRDDMLKVGGIYVAPFEVEGALLAHPDV
                     LEAAVVAWPDEDRLIKPKAFVVLKPSATASDKIAQALQEHCRQQLASYKYPRWIEFRN
                     DLPKTATGKIQRFKLRAEAPVR"
     gene            12981..13388
                     /locus_tag="VLJ17_13710"
     CDS             12981..13388
                     /locus_tag="VLJ17_13710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HSV24070.1"
                     /translation="MKPSLQPGISLVRRIPVEKEKTIGFMGEEGRVYATPYLVGDIEY
                     TCRNLILEHAEPNEDSVGMEVAIKHLAPTLPGSTVEITVTVTAVEGRKVVFAVTAKDE
                     IDTISSGSHARFVVDKTKTIERLQAKAARLRSA"
     gene            13651..15003
                     /locus_tag="VLJ17_13715"
     CDS             13651..15003
                     /locus_tag="VLJ17_13715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012043018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetate--CoA ligase"
                     /protein_id="HSV24071.1"
                     /translation="MTTPRSTSHDAADDSLFMFDREAETMPRGNLAALQLRRLRKSLT
                     HAYQKVAHVRRKFEAAGVTPETLGSLADIADFPLTEKADLRDNYPFGLFAIAREQVLR
                     LHASSGTTGKPTVVGYTRADLDLWSDLMARTLACAGARPGDIVHNAYGYGLFTGGLGA
                     HYGAERLGCTVVPMSGGGTERQVTLMRDFGATILCATPSYALNIAEVATGMGVDIAKL
                     PLRYGVFGAEPWSEPMRRDLEARLGIKAIDIYGLSEILGPGVAAECHVAQNGLHGWED
                     HFLFEIVDPESLQPRPMGEAGELVITTLTKEALPMVRYRTRDITRLCDEPCACGRTHV
                     RIMRVTGRNDDMLIIRGVNVYPSQVEALLVGFPGLAPHYQIMLTREGPLDTMTVEVER
                     TPDTPGDAEKCARLAGDVQHHLKSMIGVTCAVCVKAPGEVPRSQGKAVRVKDGRTQGN
                     "
     gene            complement(15197..>15592)
                     /locus_tag="VLJ17_13720"
     CDS             complement(15197..>15592)
                     /locus_tag="VLJ17_13720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020090797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSV24072.1"
                     /translation="AEDCWHRARQYTLDRKQFGRPLAATQLVQKKLADMQTEIALGLQ
                     AALQVGRLFDQGTATPEMVSLVKRNNSGKALDIARIARDMHGGNGIQIEYHVMRHLTN
                     LETVNTYEGTHDIHALILGRAQTGLQAFT"
BASE COUNT         3105 a         4738 c         4725 g         3024 t
ORIGIN      
        1 tgacggtcgc agcttcgacg atctgttcaa agtaataggc gccgcgcgga cggccgaaaa
       61 tgtgagcgtg gcaagtgacg tcgatgatcg agagctcgcc cttttccttg gcgatggcga
      121 tgttctcgtt gaaagattcc aacatcgttt tgggcgaatt gccgtatttc atgaactgca
      181 tgtcgttgac gtcggtgccg agcgggatgg cgacgatccg gttattgccg aaagtctgta
      241 tgtaaggcag gtcgtcgtca aacacatcgc cataccagcg ataaccggcc tcagcaagga
      301 ggcgcggcgt ctcggagcgc gacgtgccac gcggactgag ccagccttcg atcgttcggc
      361 ccgaagcttt ctctagcaac gccgtgcaac gcgcgatgtt ccggctttca tcgtcgtcgt
      421 cgagcagcgc cggaatgata tccatggcat aggaatggga cagcacttca tggccggcat
      481 ccgcaatggc cttgatggtc tcgggcgacc gctccgcgat caccgcattg accataacgc
      541 tcgccaccgc ccggtgccgc cgcaaaccat cgagcagacg atagatgccg cgcttaacac
      601 catatcccgc ccacgaaatt gccatggtgt cgagcacacc cgccggcagc gggtttccca
      661 tcgggctgat tccgggcgcc ttgccatccg accatgcctc caggcagagg ttgaaaacga
      721 cggcagttcg cttaccgttc ggccatagcc agttcaccgg tttggtcatg gcgcgccgtg
      781 ctcctcggtt cctccgaggc acgtcatatc aagttgtcgt aaggtgggca aagtcgcgcg
      841 cagccaacgc gtcatgccgc ccgctcccac gtgccgcggt ttgaatttgg cttgcggccg
      901 ccagcgcgta ttgcgcggat caggtccctc gcagatcaag cgacatgaac acgctgttag
      961 ggtcaagcac atagtcggcg aacggcggac actccacgaa gccatggttt ctgtagagag
     1021 cgtgcgctgg ccggaagtat tcccacgagc cggtttcaag gctgagacgc gacatgccgc
     1081 ttgctcgtgc cgtcgcaata atatggtgga gcatcgcgct tcccactccc cttcggcgca
     1141 tggactgggc ggtatgcatc gatttgacct cgccgtgatc tgtcgacagc cgctttagcg
     1201 ctccgcaccc taaaagcatc tcatcctccc agatagtcca aaagctcgtg tcgggcaatt
     1261 gcagccccga ggcgtccaag gcgtgcgcgc tccctggcgc cgtttgcgca cgagcgttgg
     1321 tcagatggat acgcaagaga tcggccacgc gcgggtcgct caggtcgcct tgaatgatcc
     1381 gcatcatggt ctgcctgatc tcctccgtcg actttgccca ccctaccggt tcatgatagg
     1441 aaacgcgtcg ccctggattt tcatcggatc gattgcaatg gacaatacca atggtgctcg
     1501 cgcgcggcca tggtacgagg tcgtgcagca gaccctcaag cgcaacgacg tgaagcttgt
     1561 gacctatgtg ccggacaagg tattcattcc gctgatcaag aatctccatg ccgatgtgga
     1621 ttttctgact ttcccaaccg cgcgcgaaga agaggcgctc ggcattgtct ccggcgcctg
     1681 gatgggtggc caacgcgggg cggtgctgat gcagacctca ggcttcggca ccatcgcaaa
     1741 tgtattggct tcgcttgtcg ttccttacca ggtgccggcc atcatgtttg tatccgagcg
     1801 cggcacgctg ggcgaattca acctcggcca ggcgctggtg tgtcgcacca tgcgaccggt
     1861 gttggaatcg ctcgcggtgc aaacccacac catcgcccgt catgatgagt tggaattcat
     1921 tgtcgaccgc tcgatcaagc aggcggtggc gacccaagcc gccgtcgcct tcatcctgtc
     1981 gccactgctg accggcggca aagtgtccga agcgtgattg cgctaactga ggtcgcccga
     2041 tgcccaacgc cgcttccacc gtcgccagtt acgacaatgc caaggtggtt aatcgtttca
     2101 acttgaccaa gcgtctggtc gcaaggctca agcacgaaga agccgtgatc ggcggcatcg
     2161 gcaataccaa tttcgacctg tggtcggccg gacatcgccc gcaaaatttc tacatgctgg
     2221 gcagcatggg gcttgcaatc ccgatcgcgt tcggcgtcgc gctggcgcag ccgaagcgtc
     2281 acgtcattgc cctcgaaggc gacggctcgc tgctgatgca actcggctgc ctcaccacta
     2341 tcgcgacgca aagccccaag aatctgacca tggtgattat ggacaacggt ctttatcaga
     2401 tcaccggagg tcagcgcacc ccggcggccg gaaccgccga ctatgtggcg ctcgcccgcg
     2461 ctgcgggttt gagcaagtgc gcctgggctg gcgacgagga ggatttcgac aagctgatcg
     2521 atgccgccct tgcggaggat ggcccgacct tcatcgcggc tcgcatcgac gacaagcccg
     2581 gcgtcggcac caccgaccgc gaccccgtgc agatccgcga gcgcttcatg atgggactcg
     2641 gagtgcggcg tagggtttga gagaagatca cgccgcgatc ttcacgtatt caaagtcccc
     2701 gggcttgttg tcgatcccga ctttgggggg cgcgatccag ccggcgaatt gtcctggttc
     2761 tcgcattggc ttcatcaaat cggcaatgaa atcgccgtcg gccttcgacg gcagccattg
     2821 atccttttgt tgcgcccagg cggcaggatc gatgagttca ccgtccggag ttgcgcaggc
     2881 atcgcgaaac tctccgatct ggcgatgaaa cgccacatgg ggaagctgga gccgaaaggc
     2941 gacgccagct ttttcgatgg tcttgttcca gcgctcgacg cttttcccgc aatccgtcgc
     3001 atagtcatcg cgcaggcgca tgttcagcgc ggtgagcgct ggctcgtcga cacgtttgat
     3061 cttatcgccg acaagcttga gcaccggata ggttgcgttc tcaagccggt gatcgtcgtc
     3121 gatcctggtc tcgtggaagc gccccttgag acttgcgttg aacgaattcg ccgcattggt
     3181 ggagacctcg gagccgaaca ggtcaaggga aagcgtataa tgcagattga gcttcttctg
     3241 aatggtcggt agatcgatca cgccaagcga gcgcactttg cggatattgg ccggatcgtc
     3301 gatgccggcc gctgtcatgg cctcgcacgt gcgttggacg atgcggctga tgccggtttc
     3361 gcccacgaac atgtggtggg cctcctcggt gagcatgaag cggcaggtgc gcgacagcgg
     3421 atcgaagccg gattgggcga ggctctcgag ctgcatcttg ccgtcacgat ccgtgaaggt
     3481 ggtgaacatg aagaacgata gccaatcagg tgtctgctcg ttgaaggcgc cgagcatacg
     3541 tggcgcatcg gcgctgccgg agcggcggcg cagcaactcc tccgcctcct cgcggccgtc
     3601 gcggccgaaa tatttgtgca ggatgtagac catcgcccat aaatggcgtc cttcctccac
     3661 gttaacctgg aacagattgc gcatgtcgta aagcgacggc gccgttttac ccagatgacg
     3721 ctgctgctca accgaggctg gctcagtatc gccctggatc accacaagac gacgcagcat
     3781 ggcgcggtat tcaccgggta cgtcctgcca caccggctca ccgaaatggc gaccgaacgc
     3841 aatggtgcgg ttgtactcct ggggcgccag caaaatgccc cagcgatatt ctggcattct
     3901 cacatagtcg aacttcgccc agcccttcgg gtcgaccgac actgctgtgc gcaggtagac
     3961 cagcgcctct tgaaagcctt ccggccccat gtcctgccac caggtgagat agcccgggtg
     4021 ccagccttcg agcgcccgca agatgcgacg atcctcggtg aggccgacat tgtttggaat
     4081 cttggtcgag tagtcgacat tgaacaggtc cataggaatg ctcctgtgtt cttgttgttt
     4141 gttcacgccc gtttggtgtc gaattccggc ttgcgaccgc tgccgtaacg agacagtgcg
     4201 ccggcttcgc cggttgcatt cggccgctga aatatccaat tttgccacgc actcaggcgg
     4261 gcaaagatct tggtttccat ggtttcgggg ccgccgaaac gcagattggc ctccagcccc
     4321 gtcaagctgt cgggcgaaaa gctcgcgcgt tcctcaagga agaggcgaat ctcgtcgtcc
     4381 cagtcgatat catcgagcgc gaaggtgacc aggccgagcc cctccgcggc tttagcgtcg
     4441 agcacctggc cgattgcctg acgggctttg tcgtgggcca cgggctcacc gagaaagcgc
     4501 gtgctcaatc gatcgaggcc gttgctcata gcaagcgttt tcgacagatt gacctcgccg
     4561 agcacgatcg cggccggcgg ccggttatcc ccttcgggtc tgtcgatcaa catataggaa
     4621 cggtcagccg cgaatacgat ctcggccagc gtgccggcga agcacgagcc gggctcgatg
     4681 agcacgacca gcgaacggga ggtaaggtcg atgcgcttga ggacgcgttt ccacttgagg
     4741 cgaatttcgc gggccagcca gtgtctgccg tgcagatcga gaaagatgtc gtaatcgaca
     4801 acggcgcgcg gttcgccctc ggacttgaac acgatggccg caacgtcaag ctcgttcagc
     4861 cgaatatcga ggatcgcgtc gtccagttcg cgtgcgatct gaagcggcca gaacgatgcg
     4921 ccctggtttg tcatttcctg cgcagatgcc gggcacggcg tatcgggccc gcgcagcgcg
     4981 atggtggcaa tgcgtccggc gcgatcgaac gtaaccgaga cgtaggcgta gtcgcgacgg
     5041 tccgccgtaa tgctgcgttt gagtggtgcc aacactatac ctgagccgac agttgtctcc
     5101 tcgatgtaac cggcaaattc tcgtgcgcgc gtcgcaatga tggtctcaag ctgcgagttc
     5161 ggcgtcacct cgtcgacaag gcgccattcg acggcgcgct tgccctttat gccttcctcg
     5221 gtggtgcaga aaaaatccgc gcggtcgcga cgcaccttgc gcttgtcggt gatgcgggta
     5281 agcccgccgg tccccggcaa taccgcgagc agcggcagct ctggcatcga caccgatgac
     5341 gatccgtcat cgaccaggat aatgtggtcg gcggcaagcg ccagctcgta gccaccaccg
     5401 gccgcggtcc cgttgatcac gcagatggtg cgcagcccgg atgagatgct ggcgtcttcg
     5461 atggcgttgc gggtctcgtt ggtgaactta cagaaattga ccttgtgggc atgactggcg
     5521 ccggccagca tcctgatatt ggcgccggcg cagaaaacgc ggggcttgcc tgaccgcaac
     5581 aacacgaccc gaacctcggg atgctcgaac cggatgcgct cgaaagcgtc ggcgagttcg
     5641 atgtcgacgc tgagatcata ggagttgagc ttgagatcgt agccctcgaa cagcccaccc
     5701 ttttcgtcga cgtccagcac cagcgtcacg accctgccgt cgacgttgag cttccaatgg
     5761 cgatagcgag agggatcggt ggcaaaatcg atccgtgcca gtccgttggc gagcttttgc
     5821 gcggtttcgg tcattcgctg ctccgcctat acgcacattc cgccggccgc cccgcaggtc
     5881 catcccgttt gcaacagttc ccggcaaaga tgacggattg ccgagtcatc aagccccgca
     5941 atggtggcca tgcgttgcgc acgcgaaatc atgaccttgt cattctatct gtaatcgccg
     6001 ggtaaaatcg ataatagctc ccatcgtggc gtgcggcgcc tcacgatgcg gaacgtgtcg
     6061 agttccggcc aggatcacgg cttccaccgg gcagtagcat tcctccttgg cgatttcgat
     6121 ctggcgcagc gtgccatatt ggtcgtccgt gccttggatg atgaggatgg gtacccgaat
     6181 ataggcgagt tcttctgtga tttcccactc gcgaaatccc gggtcgagcc aaggcccact
     6241 ccagctgtgg aacgcattgt cggggttttg atgccacttt cccagcttca cgcgcaggtc
     6301 ggtggtctca taggcctcgc gcatgcgggc gatctcggcg atgccgaatt cctccgtaaa
     6361 aaaatgcggc gccagcagca ccaggccgcg gacccgatgg tcctccgtgc tgcctgcata
     6421 gatggccgcg atcgacgccc catcgctgtg gccgagcagg atgccgcgtt gcagcccaat
     6481 ggcgtcgagc acgtgcggca gcacgtcgcg cgcctcctca tgcatgaagg tcatacgcct
     6541 cggcatcgtg gctggggtgg agcggccgta gccggctcga gaataagcga acacgccgaa
     6601 gccggtcgtg tccgcaaggc gcgccggaaa gtcaccccag atgccaaccg agcctaatcc
     6661 ctcgtggagc agcacgaagg tcgcggcttc acgcggatgc ggtccgacca tcttatattc
     6721 gagccggctc gatccgatct cgatgaagcc atcagctgcc aagttcacgt cgcggcctct
     6781 atatgcccag atacctatgt tggacaacgg gggcggcagc aagctcgcgc gacgttcccg
     6841 accaagcgat acggccgcgt tcgatgatgt aatggcggtc ggcgatctcg atcagcgcct
     6901 cgacattctt gtcgatcacc aggatcgatt ggccggcttg cttgagcgcc gtaaggcacc
     6961 gccatatttc atcgcggatc agcggcgcca agccctcggt cgcctcatcc aagatgatga
     7021 gccggggatt ggtcatcagg gcgcgtccga tcgccagcat ctgctgctcg cctcccgaca
     7081 gctgccgccc catggcggtg gcccgctcgg cgagcggggg gaacatggcc tcgactttct
     7141 cgagcgtcca cggctcggat aggctgcagc ggttcgacgc ggtggcgagc agattttcgc
     7201 gggtcgtcag atttgggaat atttgacggc cttcgggcac cagcccaatg ccgtgctggg
     7261 cgacccgata tggtggcaag cggcggatat ccgtaccgtt gaaacggatc gctcctgtga
     7321 tggcgggcgt cagcccgatg atggagcgga ccgtcgtggt cttacccatg ccgttgcggc
     7381 ccataaggct taccacttcg ccagccgcga tggtgagcga aatcccgaac agcacctggc
     7441 tgcggccata gcgcgtctcg atattctcga tctcgaggag cgctggtcta gccatggcgg
     7501 cgcgccttcg cgctcccgag ataggcttgg cgcacctcgg cgtcagccct tatgacgtcg
     7561 ggtggaccgg aggcaatgac gcggccatca acgagcaccg tgatgcggtc cgccagccgg
     7621 aacacagcat ccatgtcgtg ctcgatcagg aggatcgtct gctcccgctt gagttcgccg
     7681 agaagcccga tcacgcgggc agattcgtcc gcgcccattc cggccatagg ctcgtcgagc
     7741 aggagcatgc gaggggcggt ggccagcgcc atggcgatct caagttgccg gtgctcgcca
     7801 tggctgagat ttgcgcagat gacatcggcg cgattttcaa gtccgacccg agcgagcgca
     7861 gattgggccg gcacgcgcaa ctctgcttca ctccgcgccg gtcgccagaa gcggaacgaa
     7921 tggcccgcat gggcctgcac cgccaacgcg acattgtcga gcacggtgaa atcgagaaac
     7981 agcgaggtga tctggaacga gcgcgcaaga ccgagcgcgc ttcgccggtg agtcggcatg
     8041 cgcgtgatgt cgcgcccgtg gaagaaaatt cgtcccttct caggaacgat ctcgccagca
     8101 agctggccga tcagggtcga tttgccggcg ccgtttggac cgatgatggc gtgcaactca
     8161 ccggccggca catcgagtga gatgctgtcg gaggcaagca cgccaccaaa ccttttggtt
     8221 aagtcgcgaa tttgcagcat aggatcagtc acggtgcaga ctcgccaaaa tgccatcgat
     8281 gccaccgtgg gcatagacca cgatgaacag cagcaacggg ccgacgatga tctgccaata
     8341 ctccgtcacc cgtgagagcc cttcttccag catcaggagc gtggtggcgc cgatcagtgg
     8401 gccaaatagc gagcccatac cgccgagcac gatcatcacg atgagatcgc ccgagcgcgt
     8461 ccaatgcatt accgcaggac taatgaaatc ggtgtgattg gcgaggagcg cgcccgcaag
     8521 cccgcacatc atgccggcga tgacaaagct cgccagccga tagcgcaaga tcgggaatcc
     8581 tatggctcgc atgcgacgct cgttcgatcg cgagccctgg atcaccattc cgaaacgcga
     8641 attgatgaga cgtgagacga accatatcgc cgcgagaagc agagccaggc acagatagta
     8701 gaactgcacc ttgccagata ggtcgatcaa gctggcgaac tggctgcgac gatagatggt
     8761 gagcccatcg tctccgccat agcgatcgag accgaccgcg acgtagtaga tcatctgggc
     8821 gaaggcgagc gtgatcatta tgaaatagac accgcgcgtg cgcaggcaca gcgcaccgac
     8881 cacgagcgcg aataatgcac acaccgctag cgccagtggc cactgcgcaa atcccgaagt
     8941 tatgtcttcc ttggccataa tgccgaccac atagccacca aggcccagat acgcggcgtg
     9001 accgaaactc accatgccgc cataaccgag aataagattg aggctggtgg cggccagcgc
     9061 caggatgacg atgcgggtga aaagggtgag cgggaagaac tggccagttg cgaccgcata
     9121 gactggcagc agggcaagaa agaccagcag cgccccaatc acgagattgc gggcggtgaa
     9181 aatcgcgctc atttgccgtc caccggaaac aatccctgtg gctgccagac gagaacgact
     9241 gccatcagca gatagatcag catggatgac aacgccgggg cgagcgccga cgcggcggcc
     9301 ggcgtcataa caagacgaaa caattccggc agaaacgcac gaccaaccgt atcgaccaag
     9361 ccgacgaaaa tcgccgcgat gaaagcgccc cggatcgagc cgatgccgcc gatgatgatt
     9421 accacaaggg cgacaatcag gatgttctcg cccatgccga tctgtgccgt caggatgggc
     9481 gcctggatca gtccagcaag gcccgcgagc gctgctccca caccgaatac aagcgtgtag
     9541 agcaactgga tattgatgcc aagcgcgccc accatttcgc ggttcgatgc tccggcacgg
     9601 atcaacatgc ctacccgcgt gtgcatcacc acgatgtaga gggtgagtgc gactgccagc
     9661 gccgccacga tgatggctag ccggtatgcc gggtagtgca catcggggag gatctcaacc
     9721 gacgcgctga gaaacggtgg cagcggcaaa ttcatgccgg ccgggcccca cacgaggcgc
     9781 accagttcat tgaaaaacag gatcaggcca aatgtgccga gcacatgatc aagatggtcg
     9841 cggccataga gcttgcgaat ggcgatcaac tcgaccgcca tgccgaccgc gagggtcgcg
     9901 gccagcgcca gtacggcgcc gagcacgaag ctttctgtca gcgccgcgaa ggtggcggcg
     9961 aaataagctc ccagcatgta gaacgagcca tgcgcaagat tgacgacgtc catgatgccg
    10021 aacacgagcg tcagcccggc ggcaagcagg aacagcagca atccaaattg cagcccgttc
    10081 agacactgtt cgataaggag aatcacttca tcgcgcactt atcgtggaag ccgtcctgat
    10141 cgtccttgac gatggtggcg acggtcttga gcaccagcgc gcggtcgggc tctctgacca
    10201 cgtcctgcaa atagaagctc tgaatcggga agtgattatt gccgtaacgg aacgagccac
    10261 gaaccgaggc aaagtccgcc ttttccatcg ccttgatcat gtcggttttt ttggcaacgt
    10321 cgcccttgac ggcaatgact gcactgttga cgaggttcgc ggcatcgtag gtctgagcac
    10381 cgtagaagga cggcgcggtt ttgtatttcg ctttataatc ggcgacgaat ttcttgttgg
    10441 catcgttcgg cagatcgttg acccattgct gcgcgcccgg gataccgatt gcgttctcgc
    10501 cttgccgcgg cagtgttgtc tcgtcaatag taaacgccgt atacagcgga atctggctct
    10561 tgaggcctgc ctggacgtat tgattgagga actgcacgcc agccgcccct ggatagaata
    10621 cgaacacggc gtcgggcttg gcggcgcgca ccttggaaag ttcggcagag aaatcgagct
    10681 gatccggcca cctggtgtac tcctcgccga tgatcttgcc cttgaaggtt gccttgacgc
    10741 cggtcagcat gtccttgccc gccgcatagt tcgggccgat caggtaggca ttttttacgc
    10801 ccttctgatt catatagagg cccactgccg ccggcgtttg atcgttctgc catgaggtgg
    10861 agaagaaata tggtgagcac aactcgccgg cgatctgtga cggccccgca ttggcgctga
    10921 ctatgatggt cttcgaatcg attgctggct tgaacgatgc aagaagcaca ttcgaccaga
    10981 tatagccgac gatgaagtcg acatgatcgg attcgatcaa cttctcggtc ttctgcttgc
    11041 cgacttctgg tttctgctgg tcatcttcgt agatgacctc aaccggcaga ccgccgatct
    11101 tgcggtctag atgatcgagt gcaagatcga aggaatttcg catatcgttg ccgatcaccg
    11161 cagtcgggcc gctaaatgtg ctgacaaaac cgatctttat gctcttctgc tgcgccaggg
    11221 ccgacacact caggcacgcc atcagggcgc tggctgtaat gagagtcttg cgcatgtgat
    11281 catctccctt ggttgcttta tcgaaccggc gcctcggcac gcaacttgaa gcgctgaatc
    11341 ttgccggtcg cggttttcgg caaatcgttc cggaattcga tccaacgggg atatttgtag
    11401 gatgctagct gttgccggca atgctcctgc agtgcttggg cgattttgtc gctggcggtt
    11461 gcggagggct tcaagaccac gaaagccttc ggcttgatca gccgatcctc gtccggccac
    11521 gccaccacgg cggcttcgag cacgtccgga tgggccagca gcgccccttc aacctcgaac
    11581 ggcgccacat aaatgccgcc gaccttgagc atgtcatcgc gccgcccgca atagaggtaa
    11641 tagccgtcct tatcctcgat gtacttgtcg cctgagcgcg tccattcgcc gaggaacgtg
    11701 gtgcgcgact ggtcgcggtt gttccaatac atgatggcgc tggtcgggcc gcgtacctgc
    11761 aattcgccga gctcgccgcg cttgaccacg gcgccgtcgt cgctaacgag ccggatgtca
    11821 tagcccgtta ccggcttgcc ggtggtgccg tagcgcacat cgccgatccg gttcgacagg
    11881 aagatgtgaa gcatttcggt cgagccgagc ccgtcgatga tatcgacgcc atagcgctcg
    11941 ctccagcgcc gccccacatc caccggcaaa gcttcaccgg ccgagacaca cgtgcgcagc
    12001 ttgagttcag tacgggcggt tgcgcgctcg ctcgccagga aggctgcgta gaaggtcggc
    12061 accccaaaga acaccgtcac cggatgccgg cgcagcaaat ccgccacggc atcgggcgtc
    12121 ggccgggccg gcatcaaaac cgtggtagca ccggttgcca tcgggcatga catggaattg
    12181 cccaggccat aggcaaaaaa cagttttgcc accgaatata cgagatcgtt ttcggtaagg
    12241 ccgagcaccg gctcgccata gaggtccgcg gtgagccgcg ggtttgcatg cacatgcaca
    12301 gcccccttgg gttgaccggt ggatccggac gtgtagagcc aaaagcacat gtcgtcgcgc
    12361 gtggtggcgg ccgtatagtc cggaccggac gcgctttgca gcaggtcctc aagccgactg
    12421 tggccacagc cgtccgtgcc ggacacgatc acggtcgcaa ggtccgggca cgacccgatg
    12481 aggctggcaa accgcggata aagctcctcc gagacgacca gcagttttgc tcggctgtcg
    12541 ttgagcatga atcgataatc gttctcatga agcagcgtat tcaccggaac agcgacgacg
    12601 cccgccttga cggcgccgag gaatgccgtc ggccaatcga tggtatcggt gagacaaagc
    12661 agaatacggt cttcgcgcgc aataccaaga ttgcgaagca cgtggccgaa gcgtaagacg
    12721 cgctcggcaa gctgtccgta ggtccagctt ccgcgcgggt cgatgaaggc cggcttaccg
    12781 gcccgcccgg ccgcaaggtt gcggcgcaat atgtcgtcgg cgaaattgta gacgcgcggg
    12841 attgcgtcgg ctgtattgac ggccgagaag gacgccgagg tctcacccat gttccccatt
    12901 ccccaccagt gtttcttgtg acacgccatg cggcgcagag cataagacac ttgcacaata
    12961 cctcaacagg aaccgaccac atgaaaccaa gcttgcagcc gggcatctcc ctggtacgcc
    13021 gcattccagt cgaaaaggag aaaacgatcg gattcatggg cgaggagggg cgtgtctacg
    13081 cgactccata tctcgtcggc gatatcgagt acacctgccg caatcttatc ctggaacatg
    13141 ccgaaccgaa cgaggattcg gttggcatgg aagtagcgat caagcatctt gcccctacct
    13201 tgccgggctc gacggtcgag atcaccgtta cggtgactgc ggtcgaaggc cgcaaggtgg
    13261 ttttcgcggt gaccgccaag gacgagatcg ataccatcag ctccggctcc catgcacgct
    13321 tcgtggtcga caagaccaag accatcgaac gtctacaggc gaaggcggcc aggctgagat
    13381 cggcatagcg gtgtccgtgc aggctcgaaa ttctagccgc ttgccacggc tggttctctt
    13441 ggcttcgctg cgcccgggac cttatcgtgc tcggctttgt gctgagcccg cattgcgcag
    13501 gtgctgttcg cggttgccgg caccatggtt tcgttacagg ccctgaaatt catcctggtc
    13561 actcgagctg cctataatca gggtccccaa ccacactcct gttcgcggcg ccggcccgcc
    13621 gggagatccc ctcaaacccg gatgggcatg atgaccacgc caagaagcac ctcgcacgac
    13681 gccgccgacg attcgctgtt catgttcgat cgtgaagccg aaaccatgcc gcgcggaaat
    13741 cttgcagcgc tgcaactgcg gcggcttcga aaatcgctga cgcatgccta tcagaaggtt
    13801 gcgcatgtcc ggcgcaagtt cgaagcagcg ggtgtcacgc cggaaacatt gggttcgctc
    13861 gccgatatcg cggattttcc gctcaccgag aaagccgatc tgcgcgacaa ttatccgttc
    13921 ggcctgttcg cgatcgcacg cgaacaggta ctgcgcctgc atgcctcgtc cggtactacc
    13981 ggcaagccga ccgtggtcgg ctataccagg gccgaccttg acctgtggtc ggacctgatg
    14041 gcgcgcacgc tcgcgtgcgc gggcgcgcgg cccggcgata tcgttcacaa tgcgtacggt
    14101 tacggtctgt tcaccggcgg cctcggtgcc cattacggcg ccgaacggct cggctgcact
    14161 gtcgtaccca tgtcgggcgg cggaaccgag cggcaggtga cgctgatgcg agatttcggc
    14221 gccaccattc tgtgcgcgac gccatcatac gccctcaaca tcgccgaggt ggcaaccggc
    14281 atgggcgtcg atatcgccaa gttgccgctg cgatatggtg tattcggcgc cgagccgtgg
    14341 agcgagccga tgaggcgcga tctcgaggcc cgcctcggca tcaaggcgat cgatatctat
    14401 ggcctgtcgg aaattcttgg ccccggtgtc gcggccgagt gccacgtggc gcaaaacggc
    14461 ctgcacggct gggaggatca cttcctgttc gagatcgtcg atccggaatc cctgcagccg
    14521 cgtcccatgg gagaagccgg cgagctcgtc atcaccacac tcaccaagga agcgctgccg
    14581 atggtgcgct atcgcacccg cgacatcacc cggctctgcg atgaaccttg cgcctgcggg
    14641 cgcactcatg tgcgcatcat gcgggtcacc ggtcgcaacg acgacatgct catcatccgc
    14701 ggcgtcaacg tctatccctc acaagtcgag gccctgctgg taggattccc cggtctcgcc
    14761 ccgcactacc agatcatgct gacccgcgag ggcccgctgg acaccatgac cgtcgaggtg
    14821 gagcgcacgc ccgacacgcc gggcgacgca gaaaaatgcg cgcggctggc cggggatgtg
    14881 cagcatcacc ttaagtcgat gatcggagtg acctgcgcgg tctgcgtcaa ggcgccgggc
    14941 gaagtgccgc gctcgcaagg taaggcggtg cgggtgaagg atgggcgaac gcaggggaac
    15001 tgagagggct aaaacagtaa ttctataatc tgcgcgaatc tgtgcagttt tctgtaatat
    15061 ggagaggact ggtggcatta gtgcggcagc ggacgtgctg ggcgtgtcgc cgcaagctct
    15121 gcggtgtcag caggaaccga acggcattgg cgagctttgc gcagcttagc tcaactttgc
    15181 gtaggtttcc ccacattcac gtaaacgcct gcagcccggt ttgcgcgcga cccaaaatca
    15241 gcgcgtgaat atcatgcgtc ccctcatacg tgttcacggt ctccaggttc gtcagatgcc
    15301 gcatcacgtg atattcgatc tggatgccgt tgccgccatg catgtcgcgc gctatgcggg
    15361 cgatgtcgag cgccttgccg ctgttgttgc gcttcaccag cgacaccatc tcgggcgttg
    15421 ccgtgccttg atcgaacaga cggccaacct gcagggcggc ctgtaggccg agcgcgattt
    15481 cggtctgcat gtcggcaagc ttcttctgca ccaactgtgt ggcggcgagc ggccggccga
    15541 actgtttgcg gtcaagcgtg tactgccgcg cccggtgcca gcagtcttcc gc
//
LOCUS       DATILV010000588         2932 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_394457, whole genome shotgun sequence.
ACCESSION   DATILV010000588 DATILV010000000
VERSION     DATILV010000588.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2932)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2932)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2932
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_394457"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            512..1201
                     /locus_tag="VLJ17_13725"
     CDS             512..1201
                     /locus_tag="VLJ17_13725"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FCD domain-containing protein"
                     /protein_id="HSV24073.1"
                     /translation="MRQIRALLLSGALKAGDRLPPERELASQFGVGRGHVREALRKLE
                     FYGVLQTFPQSGTIVASLGAGALERLISNLLDLDRDDIKALTETRGILEMHSAQLAAQ
                     RASKAAIADIKAALDAFRSEVEAGRPAVEEDLLFHLAIAKSAQNPVMTSLIGLMTPDI
                     IRLHKVSRVCEAGRAQLALHEHVKIFRAIAAHDARAATRAMSEHVRLIKQQFDVAALR
                     VIASQRSQAHA"
     gene            1333..2133
                     /locus_tag="VLJ17_13730"
     CDS             1333..2133
                     /locus_tag="VLJ17_13730"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HSV24074.1"
                     /translation="MSTYLKHFGVAILAVVSVMLTVHPASAESTLDKIVSAKKIRIAI
                     DVANPPFGILDKSGQPDGSDVAVARQLAKDLGAEVEFVQVPSTGRIPALLAGRADVTI
                     ASISVTTDRAKAVMYCNPNGALSIIIFAAQSVKIKTPADLVGKRIGITRATLEEATVP
                     KMAPEGTKIVWFDDLASNVQALLSGQVDAAAMTAFAEKTVADANPGKQLEKKLLVTTA
                     FYGPIVRHADFELRQWINTWIFINSNNGTLAAIYKKYTGIDLPPLPTF"
     gene            2224..2895
                     /locus_tag="VLJ17_13735"
     CDS             2224..2895
                     /locus_tag="VLJ17_13735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018855566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HSV24075.1"
                     /translation="MHYAYHFNVVWDHWRDLAEGAWLTIQLSALAMTIGLAVATVCAY
                     AKTAGPSPLRRAVATYVEVIRNTPFLVQIFIIYFSLPTLVISVGANEAALAAMVINFG
                     AYGTEILRAGIESIGQGQIDAAKALGLSRLQTFRYVVLFPALKTVFPALASQFILLML
                     ASSVVSAISAVELTALTSSLVSTTFRPFEFYFVATGLYLVMALGFRAVLGGVYWMVFM
                     RRQRI"
BASE COUNT          587 a          863 c          871 g          611 t
ORIGIN      
        1 aggatagggg atccatttgg cctccatgaa aatccggtga ctgacgtcac tttcagcgct
       61 gaaacacaac gcttcaagcc tggcgcaacc atattgccac tcgcgccacc tgggttccag
      121 tggcacctgc gccggcttgc agactaccaa gggcctaact tgggcgcccc gcttctatag
      181 gtccaatgcc cggtgttggc tgtggattca accgatcacg aacggctagt cccgactcca
      241 aatcggctgg tgacgaatct cgaaaccgga cgctcacgcc catcggcgta cgcaaacgag
      301 tcctgtcagc cggatgggac aacagtcggc gttgcaggaa gtggctttgg cgtcggcgag
      361 ttgtgaaact ggacccaaac ggcgcacttg acgttgcctg ggtagattgt taagctagtc
      421 gctggttaac caattccgtg ctgtgcctaa gccgcctcca atcattgcgc agctgagccc
      481 gatccagctt cagaagccgg cggacctgat catgcggcag atcagggccc tgctcttgag
      541 cggcgcgctg aaggctggcg atcgccttcc cccggaacgc gagctcgcct cccaatttgg
      601 tgtcggacgg ggtcatgttc gcgaggcctt gcgcaagctc gagttctacg gcgttttgca
      661 gacgtttccg cagagtggca cgattgtggc gagcctgggc gctggcgcgc ttgagagact
      721 gatttccaat ctactcgatc tcgaccgcga cgacatcaag gcgcttacgg aaacgcgcgg
      781 cattctcgag atgcattcgg cacagcttgc tgcgcaaagg gcgtcgaaag cggccatcgc
      841 cgacatcaag gcggcgctcg atgccttccg ctccgaagtc gaggcaggac gccccgccgt
      901 tgaggaggac cttctgtttc acttggcaat cgccaagtcg gcacagaacc cggtcatgac
      961 ttcgctcatc ggcttgatga cgcctgacat cattcgactg cacaaggttt cgcgtgtctg
     1021 cgaggcgggg cgcgcgcaac tggcgctgca tgagcacgtc aaaatttttc gggcgatagc
     1081 cgcgcacgat gctagagcag cgactcgggc aatgtcggaa cacgtgcgtt tgatcaagca
     1141 gcagttcgac gtagctgcgc tgcgagtaat tgcatcgcag aggagtcagg cgcacgcgtg
     1201 atttctagag cagcgcgcag ggtcacacgg tcataggcca gaatttggtc ccgtcaagac
     1261 tgctggggct gctgggcgag tttgctggca cgagaataac ttcgcacttc gacgctgcaa
     1321 ggaggagatg aaatgagtac atatttgaag cattttggag tggcaatact ggccgtcgtc
     1381 tcagtaatgc tcacggtgca tccggccagc gcagagagca cgctcgacaa gatcgtgagc
     1441 gcgaagaaga tccgcatcgc cattgatgtg gccaaccctc cgtttggcat actcgacaag
     1501 agcggccaac ctgatggatc ggacgtcgcg gtcgcccgcc agctcgcgaa ggacctcggc
     1561 gctgaagttg agttcgtgca agtgccatcg accggccgta ttccggcgct gttggcgggc
     1621 cgcgcggacg tcacaattgc ctcgatttcg gttaccaccg atcgcgcgaa ggccgtgatg
     1681 tattgcaatc cgaacggggc gctctcgatc atcatctttg cggcacagag cgtcaagata
     1741 aagacgcctg ccgacctggt cggaaagcgc attggcatta ctcgcgccac gctcgaggag
     1801 gcgacggtcc caaagatggc cccggaaggc accaaaatcg tgtggttcga tgacctcgca
     1861 tcgaatgtgc aggcgctgct ttcgggccaa gtggacgccg ccgccatgac tgcattcgcc
     1921 gagaagacgg ttgccgacgc gaacccaggc aagcagcttg aaaaaaagtt gctggtgacg
     1981 accgcgtttt acggtccgat cgtgcggcat gccgacttcg agctccggca gtggatcaac
     2041 acctggatat ttatcaactc caacaacggc acgctcgcgg cgatttacaa gaaatacacc
     2101 ggcatcgatc tacctccgct gccgacgttc taagtcaacg tcgggcattg cgccaatctg
     2161 caggccgcgt agacgccgtg gcgaacccct gcaagtaggc gataaaggga atacgggcgc
     2221 ggcgtgcact acgcttatca cttcaacgta gtgtgggacc attggcgcga cctcgccgaa
     2281 ggggcctggc taaccattca gctttcggcg ctcgcgatga cgatcggtct cgccgtggcc
     2341 accgtctgcg cctatgccaa aacagcgggg ccgagtccac tccgtcgggc agtcgccacc
     2401 tatgtcgagg tgattaggaa cactcccttc ctggttcaga tcttcattat ttacttctcc
     2461 ttgccgacgc tagtcatctc ggtgggagca aacgaagctg cgcttgccgc gatggtgatc
     2521 aatttcggcg cctatggaac cgagatcctg cgcgcgggca ttgagtccat aggtcaaggg
     2581 cagattgacg ccgcgaaggc cctcggcctt tcgcgtttgc agacattccg ttatgtggtg
     2641 ctattcccgg cgctgaaaac ggtgtttcca gccttggcca gccaattcat tctcctgatg
     2701 ctggcgtcaa gcgttgtttc ggccatctcg gcagtcgaac tcaccgccct taccagttct
     2761 cttgtgtcga cgaccttccg cccctttgag ttctatttcg tcgcaactgg gctctatctc
     2821 gtcatggcgc tgggctttcg ggccgtccta ggcggtgtct actggatggt attcatgcgc
     2881 cgccaacgga tctgaggcgg cgcgcgtgaa ccgaaccttt gggctatcgg ag
//
LOCUS       DATILV010000589         2524 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2442560, whole genome shotgun sequence.
ACCESSION   DATILV010000589 DATILV010000000
VERSION     DATILV010000589.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2524
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2442560"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..513)
                     /locus_tag="VLJ17_13740"
     CDS             complement(<1..513)
                     /locus_tag="VLJ17_13740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020095918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24076.1"
                     /translation="MIGTGKLRNTIVTPATCLTVVGLVLAMAPSAQARVTRIAVEKKV
                     SPAFDGASFGSAGQYETLAGKAFGELDPDDPHNAVIQDIKLAPRNARGMVEYTATFQI
                     VKPVDMEKASRLMWHDVPNRAGRITIVPIERANGDIGLSSGWQGDNSGATAPGPNNDY
                     VVVPTAKNPDG"
     gene            complement(780..1739)
                     /locus_tag="VLJ17_13745"
     CDS             complement(780..1739)
                     /locus_tag="VLJ17_13745"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HSV24077.1"
                     /translation="MTAKQRPLGCELGHSTLGAAAIVAVIALPVLAQTPVGIPGVLAP
                     GAGPELVQEGYVFTEGPVGTADGGLYFSDIRVSKTYFLDPGGKISVTREGTNGANGLA
                     LTKDGELLFAEGDGKRITKRNRDGTISVLTEGPPGVPLLAPNDLIVDAKGGIYFTDPG
                     PRPVVPGRPTYVYYLPVGAKTPILIDGTVPRPNGLTLTNDGRTLFVDDTLNPTVFAYD
                     VEPDGSVKNKRPFLQLRDIPTGAESGADGMAIDRDGRLYVTTVAGVQVFDAQAQYLGT
                     IKAARQAANVAFGGPDKQTLYLTAREGLYRVKTLAKGPDRLGK"
     gene            1930..>2524
                     /locus_tag="VLJ17_13750"
     CDS             1930..>2524
                     /locus_tag="VLJ17_13750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSV24078.1"
                     /translation="MKFSRRRFLHLAAGAAAVPIGSRLTWGQTYPVRPITLIVPFGAG
                     GPTDVTARVIAEHMSRTLGQRLIVENVGGAGGTTATTRVMRANPDGYTIQIGHMGTHA
                     SAPAFYPNLAYRPDADFAPIGMVALTAYVIAANKHLPPNDLHEFITYAKANHQRLNMG
                     HAGVGSSTHLAGLLLNTILGLKPALVPFNSAAAATNSM"
BASE COUNT          435 a          814 c          783 g          492 t
ORIGIN      
        1 tccgtccggg ttcttcgcgg tcggcaccac gacgtaatcg ttgttcggcc ccggcgccgt
       61 cgcccccgaa ttgtcacctt gccagccact ggagagtcca atgtcgccgt tggcgcgctc
      121 gatcggcaca atcgtgatcc ggccggcacg gttaggcaca tcatgccaca tcaggcggct
      181 cgccttctcc atgtcgacgg gcttcacgat ctggaaggtc gcggtgtatt ccaccatgcc
      241 gcgcgcattg cgcggcgcca gcttgatatc ctggatgacg gcattatgcg ggtcgtcggg
      301 atcaagctca ccgaacgctt tcccggccag cgtttcgtat tggccggcgc tgccgaagct
      361 cgcgccgtca aaggcgggcg agactttctt ctcgaccgcg atgcgagtca cgcgcgcctg
      421 cgcggatggg gccatcgcga ggacgagtcc cacgacggtg aggcaggtcg caggtgtaac
      481 gatggtgttg cgcagctttc cggttccgat cacaggttcc tcccgatttt tttgagcgtc
      541 acgatcacca cgccattgca tttggctgcg gctttcacct cttcccgctt gtagaggagt
      601 cgcccccatc cttccctcac ccgcaaacgg gtgagggaag gatgggggcg ggtgaggggg
      661 cctctccaca agctcagact cgcggagaac acccctcccc ccgcaagcgg gaagaggggg
      721 cagaggctcg cgccaattgc cattgccgtg tctccaaatg ttgaatcgag cgctcgctct
      781 cacttgccca agcgatccgg ccccttggcg agcgttttca cccgatagag gccctcccgc
      841 gccgtcagat aaagcgtctg cttgtcgggt ccgccgaagg ccacattggc ggcttggcgg
      901 gccgccttga tagtcccgag gtactgggcc tgggcatcga acacctgaac gcccgcgaca
      961 gtggtgacat agagccggcc gtcgcgatcg atcgccatgc cgtcggcgcc gctttcggcg
     1021 ccggtcggga tatcgcgcaa ttgtaggaac ggccgcttgt tcttgacgct gccgtcgggc
     1081 tctacgtcgt aggcgaacac tgtgggattg agggtgtcgt cgacgaaaag ggtcctgccg
     1141 tcattcgtca gcgtcaggcc atttggtcgc ggcacggtgc cgtcgatcag gatcggcgtc
     1201 ttggcgccga ccggcaggta atacacgtag gtcggtcggc ccggcaccac gggccgcggg
     1261 ccgggatcgg tgaaatagat gccgcctttg gcatctacga tcaggtcgtt gggggcgagg
     1321 agcggcacgc ccggcgggcc ttcggtgagc accgagatgg tgccgtcacg gttgcgcttg
     1381 gtgatccgct tgccatcgcc ctcggcgaac aggagctccc catctttagt cagcgctagt
     1441 ccgttggcac cgttggtgcc ttcgcgcgtc acgctgatct tgccacccgg atcaagaaag
     1501 taggtcttgc tgacccggat gtcggagaag tagaggccgc catcggcggt gccgaccggg
     1561 ccttccgtga agacgtagcc ctcctggacc agctctggtc cagcccccgg ggccagcacg
     1621 cccggaatgc ccaccggcgt ctgcgccagc accggcaggg cgatcaccgc gacaattgcc
     1681 gctgcgccta gggtcgaatg acccagctca caaccaagtg gtcgctgctt tgctgtcatg
     1741 atgtcctccc tttgcgccag cgttttgcgt gccggctgtg ccggattgcg gctactgtat
     1801 cagaccggcg gcattacccg gaaggcggca aacatgcgaa cgttgggcat ttcgtcatcg
     1861 cggcgatggc tgatatcatc atccatatcg ggttttagtc gtctgaatgc cgaagccgag
     1921 gaaaaagcca tgaaattttc ccgccgacga tttctgcatc tggcggcggg agctgccgct
     1981 gttccaatcg gctcgcgatt gacttgggga caaacctatc cggtgcgacc aattaccctg
     2041 atcgtgccgt tcggggccgg cggaccgacg gatgttacgg cacgggtcat cgccgagcac
     2101 atgtcgcgga cactcggcca acggctcatc gtcgagaatg ttgggggcgc cggaggcacg
     2161 acggcgacga cccgggtgat gcgcgccaac cccgacggtt acaccattca gatcgggcat
     2221 atgggcaccc acgcctcggc gcccgcgttc tacccaaacc ttgcctacag accggatgct
     2281 gatttcgccc cgatcgggat ggtcgccctg accgcatatg tgatcgcggc gaacaagcac
     2341 ctcccaccca atgatctgca tgaattcatc acctacgcca aggcgaacca ccaaagactg
     2401 aacatggggc acgccggggt cggctccagc actcatctgg ccggcctgtt gctcaatacg
     2461 atcctcggct tgaagccggc cctggtacct ttcaacagcg ccgctgccgc caccaattcc
     2521 atga
//
LOCUS       DATILV010000590         4587 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_911296, whole genome shotgun sequence.
ACCESSION   DATILV010000590 DATILV010000000
VERSION     DATILV010000590.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4587
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_911296"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1170)
                     /locus_tag="VLJ17_13755"
     CDS             complement(<1..1170)
                     /locus_tag="VLJ17_13755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I poly(R)-hydroxyalkanoic acid synthase"
                     /protein_id="HSV24079.1"
                     /translation="MNDITKPVITRNSQDPAPAKAARDNLAVADRMLSPGAIDALADI
                     AKRTNRLARLRAEKLKTDDGYQVIDPRTVAATFQEFAQTAQVDPARLVQEHLRLWTDM
                     GLLWQQTAARFLFNAPVKPVISPSPKDKRFKSELWTDNYLCDYMKQFYLLMSRYIQAS
                     ADSVAGVDPHTHHKLKFYTRQFINALSPTNFAATNPVVLKAAIESRGENLIKGLRNLI
                     EDVERGGGRLSMKMSDLSAFRFGENIAISPGKVVFQNELMQLIQYAPSTPRVHRRPLL
                     IVPPWINKFYILDLKPKNSFIKWCIDQGHTVFVISWVNPGAELAAKGFADYLLEGPLA
                     ALDAIKRAIGEAEANVVGYCIGGTLTASALAYMAATDDRRVASATLFTTLLDFADV"
     gene            complement(1193..3211)
                     /locus_tag="VLJ17_13760"
     CDS             complement(1193..3211)
                     /locus_tag="VLJ17_13760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020178256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl CoA:acetate/3-ketoacid CoA transferase"
                     /protein_id="HSV24080.1"
                     /translation="MPATTTQSMLTSLRARDTGKIVGAEEAVRLIRDGDTIATGGFVG
                     IGFAEEIAAALEALYLSKREERQANGKPRNLTLVYAAGQGDGKERGLNHLGHGELLRR
                     VVGGHWGLVPKLQRLAMANQIEAYNFPQGVISHLFRDIAAKRPGHLTRVGLGTFADPR
                     HGGGKINECTKDDLVRLIEIDGEEFLFYRAFPINVGIIRGTTADPDGNITMEKEALTL
                     EVLAIAMAVRNSGGLVIVQVERIAERGSLNPRQVKIPGILVDCVVVAQPEHHWQTFSV
                     QYDPAFSGEIRAPAGSIAPMELNERKIIARRAALELNANSVVNLGIGMPEGIANVANE
                     EKIADLMTLTAEPGVIGGVPAGGLNFGAAINAQTVIDQPYQFDFYDGGGLDAAFLGLA
                     QADQQGNLNVSKFGPRLAGAGGFINISQNAKKVVFVGTFTAGRLQIAIEDGRLRVVTD
                     GKLKKFVRDVEHRTFSGNYAVQRGQPVLYVTERCVFELTQAGLELIEVAPGIDIEREI
                     LARMEFRPIVRRDPGIMDQRIFSPAPMGLRDDLLRMPLKQRFTYHPKQNQFFVNFEGH
                     VVRNHHDVERIRRIVEAMLSPLGRKVHVIVNYDNFTILPDIVDEYSAMVRDLADRYYS
                     GATRYTTNGFLRAKLGDALNRRAVSPHIYESADEARAHLRELEGKGAG"
     gene            complement(3255..>4587)
                     /locus_tag="VLJ17_13765"
     CDS             complement(3255..>4587)
                     /locus_tag="VLJ17_13765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018259951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HSV24081.1"
                     /translation="RGYSVILFAPVAAMGAVLLTDATLVPPVFSSVFMEKMVGFVKNY
                     FPVFMLGAVFGKVIELSGFSKSIVSAVIGLLGRERAILSIVVVCAILTYGGVSLFVVV
                     FAVYPFAAEMFRQSGIPKRLIPCTVALGAFSFTMDALPGTPQIQNIIPTTVFGTTTWA
                     APWLGLIGSLFVVVVGLAYIESRRRAAQAHGEGYGTDLQNEPEAFEAEKLPNPWVAIL
                     PLIVVGIANYSLTRQILRAYGETHQINLSDQLIVTKVAAVAAIWAVEGALLLGILTVF
                     VFAWRPVLAKFADGSKAAVAGALLASLNTASEYGFGAVIALLPGFTVIAGALRAIPNP
                     LINEAITVTVLAGITGSASGGLSIALAAMGDTFIAAADAAKIPLEVMHRVAAMASGGM
                     DTLPHNGAVITLLAVTGLTHKQAYKDIFVITLTKTAAVFVVIGFYYLTGIY"
BASE COUNT          923 a         1363 c         1382 g          919 t
ORIGIN      
        1 aacatcggca aagtcgagca gggtcgtgaa caaggttgca gaggcaacac gcctgtcgtc
       61 tgtcgccgcc atgtaggcaa gagcgctggc cgtcagggta ccgccaatgc aatatccaac
      121 gacgttggcc tcggcctccc caatcgcccg cttgatcgca tcgagggccg ccaagggccc
      181 ttccagcaga tagtcggcaa atcccttggc ggctagctcg gcgccgggat tgacccacga
      241 aatgacgaaa acggtgtgac cttggtctat gcaccacttg ataaacgagt tcttgggctt
      301 gaggtccaag atatagaatt tgttgatcca aggcggaacg atgagcagag gtcggcgatg
      361 aactctcggt gtcgatggcg catactggat cagctgcatg agttcattct ggaaaacgac
      421 cttcccgggt gaaatcgcta tattctcgcc gaaccggaag gccgacaggt cgctcatttt
      481 catgctcagt cggccgccgc cgcgctcgac gtcttcgatc aggttcctga gccctttgat
      541 caggttttcg ccgcgcgatt cgatcgctgc cttgagcaca accggattgg tcgcggcaaa
      601 gttggtcggt gacaacgcat tgatgaactg gcgggtataa aatttcagtt tgtggtgggt
      661 gtgtggatcg acgcccgcca cgctgtccgc cgatgcttga atatagcgcg acatcagaag
      721 ataaaattgc ttcatgtaat cgcataaata attatcggtc caaagttcgc tcttgaaacg
      781 tttgtctttt ggacttggcg aaataaccgg cttgacgggg gcattgaaca gaaagcgggc
      841 ggccgtctgc tgccagagca ggcccatatc tgtccacaac ctgagatgct cctggacaag
      901 ccgcgcggga tcaacctgcg cggtctgcgc gaactcctga aacgtagcgg ccaccgttcg
      961 ggggtcaatg acctggtaac cgtcgtcggt cttgagcttt tccgcgcgca ggcgggcaag
     1021 ccgattggtt cgcttggcga tgtccgcgag ggcgtcgatg gcgcctggac tcaacatccg
     1081 gtccgccacg gcaaggttgt cccgtgccgc tttcgcaggc gccggatcct gagaattccg
     1141 ggtgatgact ggctttgtga tgtcgttcat gtgcgtatcg tggttcgctg tcttagcctg
     1201 cgcccttgcc ttccagctcg cgcaggtggg cgcgggcctc gtctgcgctc tcgtagatgt
     1261 gcggggacac cgcgcgccga ttcaacgcat cgcccaactt ggcgcgcaga aagccgttgg
     1321 tcgtgtagcg agtggcgccg gagtaatatc gatcggccag atcgcgcacc attgccgagt
     1381 actcgtcgac gatgtccggt aggattgtga agttgtcgta gttgacaatg acgtggacct
     1441 tgcgccccaa gggtgacagc atggcttcga cgatgcggcg aatccgttcg acatcgtggt
     1501 ggttccgaac cacgtgacct tcgaaattga cgaagaactg attttgcttg gggtgatagg
     1561 tgaagcgctg cttgagcggc atgcgcagca agtcgtcgcg caatcccatc ggcgcggggg
     1621 aaaatatgcg ctgatccatg attccgggat cgcggcggac gatcggccga aactccatcc
     1681 gcgccaggat ttcgcgctcg atgtcgatgc cgggggcaac ctcgatcagc tccaggcccg
     1741 cttgggtgag ctcgaacaca cagcgttccg tcacgtacag gaccggctgc ccgcgttgca
     1801 cggcatagtt gccagaaaat gtcctgtgct cgacgtcacg gacgaacttc ttcaacttgc
     1861 catcggtgac gacgcgcaga cgaccgtcct cgatcgcaat ttgcaggcgg ccagccgtaa
     1921 aggtaccgac aaacacgacc ttcttggcgt tttggctgat gttgatgaag ccgccggccc
     1981 ccgcgaggcg tgggccgaac ttgctgacgt tcagattgcc ttgctggtcc gcttgggcaa
     2041 ggcccagaaa ggctgcgtcg aggccgccgc catcatagaa gtcgaactga tagggctgat
     2101 cgatgacagt ttgcgcattg atcgcggcac cgaagttgag cccgcccgcc ggtacgccgc
     2161 caatgactcc cggttcagcc gtcagcgtca tcagatcggc gatcttttcc tcattggcga
     2221 cgttcgcaat gccttcgggc atgccgatgc cgagattgac gacgctgttg gcgttgagct
     2281 cgagcgccgc gcgccgcgca atgatcttgc gttcgttcaa ttccattggc gcgattgatc
     2341 ccgcgggcgc gcgaatctcg ccgctgaacg ccgggtcgta ctgaaccgag aacgtctgcc
     2401 aatggtgttc tggctgggcc acgacgacac agtcgaccag aataccgggt attttgacct
     2461 gcctcgggtt gagcgaaccg cgttcagcta ttcgctccac ctgcacgatg accagaccac
     2521 cggagtttcg caccgccatg gcgatcgcca gcacttcaag ggtcagcgcc tccttttcca
     2581 tggtaatgtt gccgtcagga tcggcggtcg tgccacggat gatgccgacg ttgattggga
     2641 atgcgcgata gaaaaggaat tcctcgccgt cgatctcaat cagccggacg agatcgtctt
     2701 tggtgcattc atttatctta ccgccgccgt gacgcggatc agcaaaagtt ccgagcccta
     2761 cccgtgtaag gtgcccgggt cgcttggctg cgatgtcgcg gaacaggtgc gagattacgc
     2821 cttgcggaaa attatacgcc tcgatctggt tggccatcgc gagacgctgc agtttaggta
     2881 ccagtcccca atgcccgccg accacgcgcc gtagcagttc tccatggccg aggtggttga
     2941 gcccacgctc tttgccgtcg ccctggcccg cggcataaac cagcgtgaga ttgcgcggct
     3001 tgccgttcgc ctggcgctct tctcgcttcg acaaatagag cgcctccagc gcggccgcaa
     3061 tttcttcggc gaaaccgata ccgacgaaac cgccggtcgc gattgtgtca ccgtcgcgaa
     3121 tgagacgaac cgcctcctcg gcgccgacaa tctttccggt gtcccgcgcc cgcagtgacg
     3181 tgagcatcga ttgggtggtg gtagccggca tggtttgttt ccgaacgctc tcacccgctt
     3241 ttgcacgtca acgatcagta aatcccagtc aaatagtaga atccgatgac aacgaacacc
     3301 gctgcggtct tcgtcagcgt aatcacgaat atgtccttat acgcctgctt gtgcgtgagg
     3361 cccgtgacag caagcagcgt gatgacggcg ccgttatgcg gcagcgtgtc catgccgccg
     3421 ctggccattg cagcgacacg atgcatgacc tcaagcggga tttttgctgc gtcggcggcg
     3481 gcgatgaagg tatcgcccat ggccgcaagg gcgatgctca ggccacccga ggccgacccg
     3541 gtgatcccgg caaggacagt cacggtgatg gcttcgttga tgagcggatt ggggatcgcc
     3601 ctgagcgcgc cagcgatcac cgtaaagccg ggcagcaagg caatcaccgc gccgaatcca
     3661 tactccgacg cggtattgag cgacgccagc aaggctccgg cgaccgccgc cttgctgccg
     3721 tccgcgaatt ttgccagcac aggccgccag gcgaagacga acacagtcag gatgcccagc
     3781 aacagcgcgc cttcgaccgc ccaaatggct gccacggcgg caactttcgt gacgatgagc
     3841 tgatcgctga gattgatttg atgcgtctct ccgtaggcgc gcaggatctg acgtgtcagc
     3901 gaatagttcg caatacccac cacgatcagc ggcaagatgg cgacccaggg gttcggcaat
     3961 ttctcggctt cgaacgcctc cggctcgttc tgcagatcgg tgccgtagcc ttcgccgtgt
     4021 gcctgcgcgg cccggcgccg gctctcgata taggcaagac cgacaacaac aacgaacagg
     4081 ctgccaatca agccgagcca cggggcggcc caggtcgtcg tcccgaagac cgtagtgggt
     4141 atgatgttct gaatctgtgg cgtgcccggc agggcatcca tcgtaaagct gaatgcgccg
     4201 agcgcgaccg tgcaagggat gagccgtttg ggaatcccgc tctggcggaa catctcggcc
     4261 gcgaacggat agaccgcgaa caccaccacg aacaatgaca cgccgccata ggtcaggatc
     4321 gcgcagacca cgacgatcga cagaatggct cgctcacggc cgagcagtcc gatgacggcg
     4381 gagacgatcg acttggagaa tcctgacagc tcgatgacct tgccgaaaac cgcaccgagc
     4441 atgaacaccg gaaaatagtt ttttacgaag ccgaccatct tctccatgaa gacgctggag
     4501 aataccggag gcaccagcgt cgcgtcggtc agcagcacgg cgcccatcgc ggcgaccggg
     4561 gcgaacaaga tcacgctgta gccgcga
//
LOCUS       DATILV010000591         3147 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4484057, whole genome shotgun sequence.
ACCESSION   DATILV010000591 DATILV010000000
VERSION     DATILV010000591.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3147)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3147)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3147
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4484057"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..969
                     /locus_tag="VLJ17_13770"
     CDS             <1..969
                     /locus_tag="VLJ17_13770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate
                     5-triphosphate diphosphatase"
                     /protein_id="HSV24082.1"
                     /translation="VMPRPGVHFAMDIALFDTDRQVLANGITTVFHGVTWSWEPGLRG
                     ADNARAILAAMEELQPRLGADTKFHLRHETFNLEAEPEIIDWIDRRRIGVLGFNNHLP
                     AIKNDAPVRPAKIAEMAQRSGISHDAFQNLVSRIAKCADEVPGSIERLSAAARANGIA
                     LLSHDDISPEQRRWYRSMGCRLAEFPTTIETAQEAASAGDHVVLGAPNVVRGGSHIGW
                     IDAKDMIARGMCSILASDYYYPAPLLAAFRLAADGVTTFETAWTLVSEIPAAAVGLPD
                     RGIIAVGRRADLILVDVTGGRPRVVATIVAGRVVYLAEAARIHGGQ"
     gene            956..1696
                     /locus_tag="VLJ17_13775"
     CDS             956..1696
                     /locus_tag="VLJ17_13775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1045 domain-containing protein"
                     /protein_id="HSV24083.1"
                     /translation="MADNDAAGLAPVTMMDQRYCIYFVPAADTMLYRFGAAVLGYDCF
                     TGADFPTLDALPVDAYTWRKLTREPRRYGFHATLKAPFRLAVGRTEAELIGEFEEFAR
                     TIDVAPTIEPAVRLLQRFVAIVPVTAPPGLGRLAASCVAHFDGFRATQTDADRIRRLA
                     AHLTARQIEHVERWGYPYVFEDFRFHMTLTGALSADCQKPLLQYLRDGLARSHGDGSI
                     SIDRLALLRQDNPGARFVVLTHSAIGQF"
     gene            1789..2760
                     /gene="phnC"
                     /locus_tag="VLJ17_13780"
     CDS             1789..2760
                     /gene="phnC"
                     /locus_tag="VLJ17_13780"
                     /EC_number="7.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013419176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015416 - ABC-type phosphonate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015716 - organic phosphonate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter ATP-binding protein"
                     /protein_id="HSV24084.1"
                     /translation="MRDRAAVSSEAVVEVRRVSKSFDRRHPILRCVSFSVRRGEMVAL
                     IGASGSGKSTLIRAMAGLVSIDKSFVVDDLDGANGEIVLFGQPMQRRGRVTQAAKYLR
                     VRVGVVFQQFNLVPRLSVLTNVCLGRLGQMSFFHSTIGRFTATDRRCAMQALARVGIA
                     DHALKRGADLSGGQQQRAAIARTLVQGAELLIADEPIASLDPGAARRIMDILADLNRR
                     DGITVLVSLHQVEYAFRYCPRTIALRCGEVVYDGPSSELTPALLTSIYRADSEDLFVP
                     SGEVAGVMRSHLPTAQVGKQASTVPPPHAAPPAGRMSADGEAERLRA"
     gene            2789..>3147
                     /locus_tag="VLJ17_13785"
     CDS             2789..>3147
                     /locus_tag="VLJ17_13785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013419175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhnD/SsuA/transferrin family substrate-binding
                     protein"
                     /protein_id="HSV24085.1"
                     /translation="MLRNAFMYQAAGLMVVGWITGAAAQAPVEINFGVISTEASINQK
                     KNWEPFLQAIANSTGFKVNGFYSTDYAGVIEAMRFNKIQVAWYGNKSGMEAADRAGAE
                     VFAQIVSRDGNIGYYSH"
BASE COUNT          567 a          945 c          983 g          652 t
ORIGIN      
        1 gtgatgccgc gtccgggcgt ccacttcgcc atggatattg cgctgttcga caccgatcgg
       61 caggtgctcg ccaacgggat aaccacggtg tttcatggcg tcacctggtc gtgggagccg
      121 gggctacgcg gcgccgacaa cgcgcgggcg atcctcgccg cgatggagga actgcagccg
      181 cgtctcggcg ccgacaccaa attccatctg cgccatgaga ccttcaacct cgaggcggag
      241 ccggagatta tcgactggat cgataggcgt cgcatcggtg tgttgggatt caacaatcat
      301 ctaccggcga tcaaaaacga tgcgccggtg cggcccgcca agatcgccga gatggcccaa
      361 cggtccggca tctcgcatga cgcattccag aacttagtct cgcgcatcgc taagtgtgct
      421 gacgaggtgc ccggctcgat cgagcgactt tcagcggccg cgagggcgaa tggtattgcg
      481 ttgttgtctc atgacgatat cagcccggag cagcgccgtt ggtatcgctc catggggtgc
      541 cggctcgcag agtttcctac cactattgag accgcacaag aggcggccag cgctggcgac
      601 catgtcgtgc tcggcgcgcc gaacgtggtg cgtggcggca gccatatcgg ctggatcgat
      661 gccaaggaca tgatcgcgcg cggcatgtgc tcgattctgg catcggacta ttactatccg
      721 gcgccgctgc ttgcagcctt ccgtctcgcc gcggacggcg tcacaacatt cgaaacggca
      781 tggacgctgg tctcggaaat tccggcggcg gcggtcggcc tccccgatcg tggcatcatc
      841 gcggtcgggc ggcgcgccga tttgattctc gtcgacgtaa ccggcggacg cccccgtgtg
      901 gtcgccacca tcgtggcggg tcgggtcgtc tatctcgctg aagccgcacg cattcatggc
      961 ggacaatgac gcggcaggct tggcgcccgt tacgatgatg gatcagcgat actgcattta
     1021 cttcgtcccc gccgccgaca cgatgttgta tcgcttcggt gctgccgtgc tcggctatga
     1081 ttgcttcacc ggcgccgatt tcccgacgct cgatgcgctg ccagtcgatg cctacacgtg
     1141 gcgcaaattg acacgtgagc cgcggcgcta tggattccat gccactttga aggccccgtt
     1201 tcgccttgcc gtcggacgta cagaagccga gttgatcggc gagtttgagg aattcgcacg
     1261 caccatcgat gttgctccaa cgatcgaacc ggccgtccgt ctgttacaac gtttcgtcgc
     1321 aatcgtaccg gtgaccgctc ccccggggct tggtcggctt gcagcgtcgt gcgttgccca
     1381 cttcgacggt ttccgcgcga cgcagacaga cgcagaccgg attcggcgct tggccgcgca
     1441 tctcacagcg cggcagatcg agcatgtcga gcgctgggga tacccctacg tcttcgagga
     1501 cttcagattc catatgacgc taaccggcgc actttcggcc gattgtcaga aacctctgct
     1561 gcaatatctg cgggatgggt tggcacgcag ccacggcgat ggttcgattt cgatcgatcg
     1621 gcttgcctta ttacgtcagg ataaccctgg ggcgcggttt gttgtgttga cgcatagcgc
     1681 gattggtcag ttttgacgca tggagtgcaa ccgagcgctc gcgcgaggaa attgccaatt
     1741 cttctctgcg ttcatagtgg tgtcacatgc ggctgctagc cgaatgatat gcgcgatagg
     1801 gcagccgtat cgtcggaagc cgtggtggag gttcggcgcg tctcgaagtc ttttgaccgg
     1861 cgtcacccga ttctgcgctg cgtctccttt tcagtgaggc gcggcgaaat ggtggccttg
     1921 attggcgcct cgggcagcgg caagtccacc ttgatccgtg ccatggccgg gctggtgtcg
     1981 atcgataaat cctttgtagt cgacgacttg gatggtgcga acggcgagat cgtcctgttc
     2041 ggccagccga tgcaacggcg cggtcgcgtc acacaagccg cgaaatacct gcgcgtgcgc
     2101 gtcggagtcg tatttcagca gttcaatctg gtgccacggc tttcggttct gaccaatgtc
     2161 tgcctcggtc ggctcggcca gatgtcgttc ttccacagca cgatcggtcg atttacagca
     2221 acggacagac gttgcgccat gcaggcgctc gcccgcgtcg gaattgcgga tcatgcgctc
     2281 aagcgagggg ccgatttgtc cggaggacag cagcagcgcg ccgcgattgc ccgcacattg
     2341 gtgcaaggcg ccgagttgct gatcgccgat gagccgatcg cctcgcttga tcccggtgcc
     2401 gcgcggcgca tcatggatat cctcgccgat ctcaatcgcc gcgacggcat cacggtgctg
     2461 gtgtcattgc atcaggttga atacgcgttc cgctattgcc cgcgcaccat tgcgctgcga
     2521 tgcggtgagg tggtctacga cggcccgtcg agcgaactga cgcccgcgct gttgacgtcg
     2581 atctaccgcg cagacagcga agatctgttt gtgccgtcgg gcgaggtggc gggtgtgatg
     2641 cgctcacatc ttccgaccgc gcaggtcggt aaacaggcat cgaccgtccc gccaccacac
     2701 gccgcgccac ccgcagggcg catgtcagcc gacggcgaag ccgaacgact gcgagcttga
     2761 gacgcgcgtt agagccagga gccaaaacat gctgcgaaat gccttcatgt accaagctgc
     2821 tggcctgatg gtggtgggat ggataaccgg tgcggccgcc caggcaccgg tagaaattaa
     2881 tttcggcgtg atctcgactg aagcatcgat aaatcagaag aagaactggg agccattcct
     2941 gcaggcgatc gccaattcga ctggattcaa ggtcaacgga ttctattcaa ccgactacgc
     3001 cggcgtcatc gaggccatgc gcttcaataa gatccaggtg gcgtggtacg gcaacaagtc
     3061 cggcatggag gctgccgacc gtgccggtgc cgaagtgttc gcccagatcg tctctcgtga
     3121 cggcaatatc ggatattact cccacat
//
LOCUS       DATILV010000592         7986 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1420078, whole genome shotgun sequence.
ACCESSION   DATILV010000592 DATILV010000000
VERSION     DATILV010000592.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7986)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7986)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7986
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1420078"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..706)
                     /locus_tag="VLJ17_13790"
     CDS             complement(<1..706)
                     /locus_tag="VLJ17_13790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014891515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HSV24086.1"
                     /translation="MKLPRQFFKPLAVGAPAPLRDLPVRLERMVHFVPPHLDKMRQKV
                     PDLIRQVDVVLGNLEDAIPADAKEAARRGFIEMGQAHDYGMTGLWTRINALNSPWALD
                     DIIEIVAAIGDKLDVIMLPKVEGVWDIHYLDQLLAQLEARHHVSKPILIHAILETAEG
                     VNNVEAIASASPRMHGISLGPADLAASRAMKTTRVGGGHPDYVVLADATVGAQDGGAR
                     AAFQQDLWHYTISKMVD"
     gene            complement(1070..1942)
                     /locus_tag="VLJ17_13795"
     CDS             complement(1070..1942)
                     /locus_tag="VLJ17_13795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015685376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-5-aminohexanoate cleavage protein"
                     /protein_id="HSV24087.1"
                     /translation="MQRKVMISCAVTGSADTPGKNPAVPVTPQQIAQSAVDAAKAGAA
                     IVHIHVRDPLTTRPSMDGSLYREVVDRIRSSGVDVLINLTTGPGGRFAPGTEDPLKPG
                     QATNLKLPAQRVQHVLELLPDICSLDMGSMNMGSFVFINTPSYLEAMAIAIRDADVLP
                     ELEVFEAGHLLLAKRMIETGHIKGPGMFQICLGIAWGQPATPEAMAYMRGLLPKESPW
                     FAFGISLHQFPMVAQAVLLGGHVRVGLEDNIYLAKGQLAPSNAALVEKAARIIELLGD
                     SVATPAEARKLLAR"
     gene            2125..3234
                     /locus_tag="VLJ17_13800"
     CDS             2125..3234
                     /locus_tag="VLJ17_13800"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003501317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HSV24088.1"
                     /translation="MTQPLSGILVLDFTTLLPGPLATLMLAEAGAEVIKIERPGGEEL
                     RRHPPYIDSESAVYAVLNRGKRSILLDLKEPDDRARLAPLLARCDVVVEQFRPGVMAR
                     LGLDYEAVKAVNPRAVYCAITGYGQQGPRRSEAGHDLNYIAATGLLALSPGPQDRPTV
                     PPALIGDIGGGAMPAVMNILLGLRRRDATGEGCFVDIAMADAMFTFAWHALASGFAEH
                     CFPAPGAARLTGGSPRYQLYPTRDSKLVACAALEQKFWLAFCAAIGLAPALIDDRVDA
                     AATTTAVAGIIASRTAQEWRPVFAAADCCATIVTELEHAVVDPHFVGRGLFAHEVVTA
                     KGTVMPALPIPIDPGFRTAPRVVATLQPGTDNGLV"
     gene            3447..3651
                     /locus_tag="VLJ17_13805"
                     /pseudo
     CDS             3447..3651
                     /locus_tag="VLJ17_13805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010910187.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TOBE domain-containing protein"
     gene            complement(3699..4925)
                     /locus_tag="VLJ17_13810"
     CDS             complement(3699..4925)
                     /locus_tag="VLJ17_13810"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HSV24089.1"
                     /translation="MRHHVAVCLIALMLPAPPATADALRVLGAGSLTDAFTDLLRRFP
                     AGADMIAAPEFGPSGLMREKIEAGLDVDLFASADMEQARRLAVGHPERVVIHFTRNRL
                     CAVARAAIGLTTTNMLDRLLDPAVRLATSTPGTDPSGDYAWAVFARAEAVRAGARAAL
                     EAKAQQLYGAGAKTPPLVPGKGAVEGIFLSDRADVGLTYCSGTPAVMREVPGLVVVPL
                     PPELTVGPAYGMVLLNAKAVTLRFATFVLSEGGQAVMKAHGFDPVALIEPVPRSPGLL
                     VQRTGQASRVISIDHISALKPITQKVAFRTDRGEQQSEWTGPLLWDVLVASGATESIK
                     PGEQARLTIRVTGADGYTAVIALAEIAPQFAGRPIQLADHVDGALLPDHALRLIVPGD
                     RRGGRSVRDVIRIDMD"
     gene            complement(4942..5553)
                     /locus_tag="VLJ17_13815"
     CDS             complement(4942..5553)
                     /locus_tag="VLJ17_13815"
                     /inference="COORDINATES: protein motif:HMM:NF021593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2325 domain-containing protein"
                     /protein_id="HSV24090.1"
                     /translation="MSPFGRCSIYSDKYDDARAAREALTDLERRVNREIARRVRLESR
                     LETTMLAQSRAERARNDTQRECEGLRRDLALVEVQVNGWLAQDLNSPTAELGGAQVLY
                     VGGRAHQVPQLKAVVERAGGALLYHDGGIEHSMTLLPGLISRADCAVFPIDCVSHDAM
                     AMLKRQCRQFAKPFIPLRTSSLASLLSGLTMLDRTGGAVAAIV"
     gene            complement(5555..6799)
                     /locus_tag="VLJ17_13820"
     CDS             complement(5555..6799)
                     /locus_tag="VLJ17_13820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiH/UbiF family hydroxylase"
                     /protein_id="HSV24091.1"
                     /translation="MTTQLERSASARPSAQTTSVAVIGGGPAGLMAALALAHFGVPTV
                     LVAPRPDRIDNRTTALMAPSVKALEALGVWSRCRTYAAPLRVMRIADDTGRLWRAPEM
                     RFEAAEIGLEAFAWNIENTHLVAALWGRVATMPSLTHVAIAARSISIDAAKVTFTLAD
                     GTMLGCQLAVGADGRNSICRTAAGIALDGRAYPQTALTFTLAHTRPHHDISTEFHTAQ
                     GPFTLVPLPGARSSLVCVVAPDEAERLGALTGAALDAEIERRCHSILGKTRVEPGHGT
                     FAMSVATARKFAADRIALVGEAAHLFPPIGAQGLNLGLRDAVTIAEIAGDIHRRSGDI
                     GNATAEYDRRRRPDIASRTLAVDLLNRSLLSDFLAVQGLRGLGLYALDRIGALRRAAM
                     REGVAPRTGMPALMQGETDREA"
     gene            complement(7329..7748)
                     /locus_tag="VLJ17_13825"
     CDS             complement(7329..7748)
                     /locus_tag="VLJ17_13825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24092.1"
                     /translation="MQRTCLPKMQLAQIVAVSIRPGRAVIEIGFKARFLAVALIGVVA
                     WYQPVAAAVCRVPAAVLCEGCVERLSIRVAPGGTCRVSFTATPSEQAASARFVDINIE
                     TVPPRTTLHRMNAPRPHAARVRDSAVCFVFNGRRFCE"
     gene            complement(7804..>7986)
                     /locus_tag="VLJ17_13830"
     CDS             complement(7804..>7986)
                     /locus_tag="VLJ17_13830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24093.1"
                     /translation="KTCAATEVLDRDGNCVPRGEPKPARPTIANSSPRPHRTEAPATG
                     RSGRGCFNFNGRQFCE"
BASE COUNT         1532 a         2433 c         2525 g         1496 t
ORIGIN      
        1 catcgaccat cttggaaatg gtgtagtgcc acagatcttg ctggaacgct gcgcgagcgc
       61 cgccatcctg tgcgcccact gtggcatcgg cgagcaccac atagtctgga tgtccgccac
      121 ccacccgggt cgtcttcatg gcgcgcgagg ccgccagatc cgcggggccg agactgatgc
      181 cgtgcatgcg cggggaagcc gatgcgatcg cctccacatt attcacgccc tctgccgtct
      241 ccaggatggc gtggatcagg atcggttttg aaacatggtg gcgtgcctcg agctgggcca
      301 gtagctggtc gagatagtga atgtcccaga cgccttcgac cttgggaagc atgatgacgt
      361 cgagcttgtc gccgatggcg gcaacgatct cgatgatgtc atcgagtgcc catggagagt
      421 tgagggcatt gattcgtgtc cataatccgg tcatgccgta gtcgtgcgcc tggcccatct
      481 cgataaagcc gcgccgtgct gcctccttgg catcggccgg aatggcgtcc tccaagttgc
      541 cgagcacgac atcgacttga cggatcaggt ccggcacttt ctgacgcatc ttgtccaggt
      601 gcggtggcac gaaatgaacc atgcgttcga gtcggaccgg aaggtcgcga agcggcgcgg
      661 gcgcaccgac agcgagcggc ttgaagaatt gacgcggaag cttcatcgag aatcccagtt
      721 tacggtgtca taccccgcga aagcggggca tccagtaact catgtgctat ctttcttatg
      781 ctgcggttaa gccaaaatcc cctggtcact ggggcgccca cctttgagcg tgtgagcaaa
      841 tccccttgga aaccggtacg tttcggaatc gccacgtgta caaaccggca tcgcaacgtg
      901 aaccttgttc tatttcttca cgcgcgctcc cttgcgggtg atgacaacag ggaggctagt
      961 tgatcgcctt tgatgcgcca agccgcaaaa agcgtcacgc cggtcaaagc tgatagttgg
     1021 gctatcggcg ttcggtatcg acgatccgtc gataacgcta tgaatgccgt tatctcgcca
     1081 gcagtttccg cgcctcagcc ggcgttgcga cactgtcgcc aagcagttcg atgatcctgg
     1141 cggccttttc gaccaacgct gcattgcttg gtgcaagttg gcccttagcg agatagatgt
     1201 tgtcctcgag accgacccgc acatggccgc cgagcaacac agcttgcgcc accatcggaa
     1261 actgatggag cgaaatgccg aacgcgaacc acggggattc cttcggcagc aggccgcgca
     1321 tataggccat ggcctcgggt gttgccggtt gtccccaggc gatgccgagg caaatttgga
     1381 acatgcctgg ccctttgatg tggccggtct cgatcatgcg tttggccagc agcaggtgcc
     1441 cggcctcgaa tacttcaagc tcaggcagca cgtcggcgtc gcggatcgca atcgccatgg
     1501 cctcaaggta ggacggtgta ttgatgaaga cgaagctgcc catgttcatg ctgcccatgt
     1561 cgaggctgca gatgtctggg agaagctcaa ggacatgttg gacgcgctgg gctggtaatt
     1621 tcaggttggt ggcctggccg ggcttgagcg gatcctcggt gccaggcgcg aaccggccgc
     1681 ccgggccggt ggtgagattg atgaggacat caactccgct tgagcggatg cggtcgacca
     1741 cctcgcgata cagtgagccg tccatgctgg gccgcgtggt gagcggatcg cgcacatgga
     1801 tgtgcacaat ggcggcaccc gccttggcgg catcgaccgc cgattgtgca atttgctgcg
     1861 gcgtcaccgg gactgccggg ttcttcccag gcgtgtccgc cgatcccgtg acggcacacg
     1921 atatcatcac cttacgttgc atggtcgccc cgcttcatgt cgatgatcac agtttagtcc
     1981 ccggtggggg cgcgcgccta gccggccgcg accatcagcc cctcagctgt tgtgctgcgt
     2041 gctcgccacc tgtgaaatcg gtgcataaac ttgccaaaag ccgcaacttt gcatcctgaa
     2101 gttcccccaa aaggcgccgc cgcaatgacg caacctctct ccggtattct ggttctggat
     2161 ttcaccacat tgcttccggg cccgctcgcc accttgatgc tggctgaagc aggcgccgag
     2221 gtcatcaaga tcgagcgtcc aggcggcgag gagctgcgac gtcatccgcc gtatatcgat
     2281 agcgagagcg ccgtttatgc ggtgctcaat cgcggcaaga ggagcatcct gctcgacctc
     2341 aaggagcccg acgatcgggc gcggctcgcg ccccttctgg cacgctgcga cgtggtggtc
     2401 gagcaatttc gcccgggtgt gatggcccgg ctcggcctcg actatgaagc tgtcaaagcc
     2461 gtaaatcctc gtgcggtcta ttgcgccatc acgggatatg gccagcaggg gccgcgccgc
     2521 agcgaggccg gccatgatct caactatatc gctgccaccg gactgctcgc gctttccccc
     2581 ggcccgcagg atcgtcccac tgtgcccccc gcgctcattg gcgatattgg tggcggtgcg
     2641 atgccagcgg tgatgaacat tcttttgggt ctgcgccgcc gcgatgcaac cggggagggc
     2701 tgcttcgtcg acattgccat ggcggacgcg atgttcacct tcgcctggca tgcgctggcg
     2761 tcgggctttg ccgagcattg ctttccagcg cccggcgcgg cgcgcctgac cggcggatcg
     2821 ccgcgctatc aactctatcc gacccgcgac agcaagctcg tcgcgtgtgc ggcactggaa
     2881 cagaaattct ggctcgcctt ttgcgctgcg atcggacttg cgcccgcgct cattgatgat
     2941 cgcgtggatg ccgcagcgac gacgacggcc gtcgctggca tcatcgcgag ccggacagca
     3001 caggaatggc gtccggtgtt cgccgcggcc gattgctgcg ccaccatcgt gacggaactc
     3061 gaacacgctg tcgtcgatcc gcatttcgtc ggccgcggct tgtttgccca cgaggtcgtc
     3121 accgcaaagg gcaccgtaat gccggccctt ccgatcccga tcgatccggg gtttcgcacg
     3181 gcgccacgcg tggtagcaac actgcagcct ggtaccgaca acggattagt ttgagggcgc
     3241 gatcatatcg gtcgtatcct cggtgttggc ggttacacgt tttcaagttg ctttaccgag
     3301 cgcaaacaca tgcatgccct aaagagacag tgctgtatac ggcgagtgaa acatcgagat
     3361 ggtgaaccaa gatcagcatg aatttgggtc gtcattgctc cgtcggatgg tggcaaactc
     3421 ggtgcccaga actgaacgga ggccatatga agctgagcgc acgtaatatc ctgaagggaa
     3481 cactcaccga tgtgaagaag ggcagacgac gacgcacgta ctgttggata tggaggggca
     3541 gtcgtcacct cctcgatcac caacgaagcc gccgatgaat tgaaattagc aagaggtcag
     3601 tctgcctacg cggtgatcaa agcctcggac aggatagtcg ggatcgatta gctgcgtatt
     3661 gatcgaggac cgtttgccct gcgccgatga ggcgtccgtc aatccatgtc gatgcgaatg
     3721 acgtctcgca ccgaccggcc gccacgccga tcgccgggta caatgagacg cagcgcgtga
     3781 tctggaagca atgcgccgtc cacgtggtcg gcgagctgaa tcgggcgacc cgcaaattgt
     3841 ggggcgatct ccgcgagggc gatgactgcg gtatagccgt ctgcaccagt gacccggatc
     3901 gtaaggcgag cctgctcgcc gggctttatg gactcggttg caccggaggc gacaagtaca
     3961 tcccacagca agggacccgt ccattcactc tgctgttcgc cgcggtcggt tctgaaggcg
     4021 actttttggg taatcggctt aagagcggat atgtgatcaa tggaaataac gcgcgacgct
     4081 tggcccgtgc gctgcacgag aagtccgggt gatcgcggga caggctcgat gagagccact
     4141 ggatcaaacc cgtgcgcctt catgacagcc tggccaccct cggataagac gaaggtcgcg
     4201 aagcgtaaag tcaccgcctt ggcgttgagc agcaccatac cataggcagg cccaacagtt
     4261 agttccggtg ggagcggcac gacgacgagg ccaggcacct cacgcatcac ggctggggta
     4321 ccactgcaat acgtgagtcc tacgtcggcc cggtcgctaa gaaaaatgcc ctcgacagca
     4381 cccttgccgg gaaccagcgg aggcgtcttg gcgccggcac cgtatagttg ctgtgccttg
     4441 gcctcgagcg ctgcccgtgc gccggcgcgg acggcctcgg cgcgggcgaa aaccgcccac
     4501 gcatagtctc cactgggatc ggtcccaggt gtcgacgtgg cgagacgcac tgctggatca
     4561 agcaggcggt ccagcatgtt ggtcgtggta agaccaatcg ccgcgcgggc caccgcgcag
     4621 agacggttgc gggtgaagtg aatgaccaca cgttcgggat gaccaacggc aaggcgtcgc
     4681 gcctgctcca tgtcggcaga cgcaaaaaga tcgacgtcca gcccggcttc tatcttctcg
     4741 cgcatcaggc cggagggtcc aaattcaggt gccgcgatca tgtcagcacc cgccggaaac
     4801 cggcggagca aatccgtaaa tgcgtctgtg aggctgccgg cgcccaggac tcggagagcg
     4861 tcggccgtgg ccggaggcgc aggcaacatc agggcgatca ggcaaacagc aacatgatga
     4921 cgcatggtac ccttccaaag tttagacgat cgccgcgacc gctccaccag tccggtccag
     4981 catcgtaagt cccgaaagca agctcgccaa gctcgatgtg cgtaacggaa taaacggctt
     5041 tgcgaactgc cggcactgcc gcttcaacat tgccatcgcg tcgtggctca cgcaatcgat
     5101 tggaaagacc gcgcaatcgg ctcgactgat gaggccaggc agcaatgtca tgctgtgctc
     5161 aattccacca tcgtgataaa gcaacgcgcc gccggcgcgt tccaccacgg ctttaagctg
     5221 cggcacctga tgagctcggc cgccgacgta aagcacctgc gcgccgccaa gttccgcggt
     5281 gggggagttg aggtcttgcg caagccagcc attgacctgc acctcaacga gggctaaatc
     5341 gcgacgcaac ccttcgcatt cgcgttgagt gtcgttccga gcgcgctcgg cccgcgattg
     5401 cgcgagcatc gtggtctcga gacggctttc gaggcgcacg cggcgggcaa tctcccggtt
     5461 gacccggcgc tcgaggtcgg tcagcgcctc cctggcggcg cgggcgtcgt catatttgtc
     5521 ggaatatatc gagcatcgtc caaatgggga caaatcaagc ttctcggtcc gtctcgccct
     5581 gcatcagcgc tggcattccg gttcgtggtg cgacgccctc gcgcatggcg gcgcggcgca
     5641 gcgcgccaat gcggtcgagg gcgtagagcc cgagaccgcg caggccctgc acggcgagaa
     5701 aatccgacaa gagcgagcgg ttgagaagat cgaccgcaag ggttcggctg gcgatgtcgg
     5761 gacggcggcg gcggtcgtac tctgcggtcg cgtttccgat gtcaccgctg cggcggtgaa
     5821 tatcgccggc gatctccgcg atggtgacag cgtcgcgaag gccaagattg aggccctggg
     5881 cgccgatcgg cggaaacagg tgggcggcct cgccgacaag cgcgatgcga tcggcggcaa
     5941 atttccgtgc cgtcgccacg gacatcgcaa aggtgccatg gccaggctcg acacgggtct
     6001 taccgaggat ggagtggcag cgccgctcga tctcggcatc gagcgcggcg ccggtgagag
     6061 caccgaggcg ttcggcttca tccggagcaa cgacgcagac gaggctcgaa cgcgcgccgg
     6121 gcagagggac caaggtaaac ggcccctgag cagtgtggaa ttccgtcgag atgtcgtggt
     6181 gcgggcgcgt atgggcgagc gtgaaagtga gggcggtttg cggataggcg cggccgtcca
     6241 acgcaatgcc ggcggcggtg cggcagatgg agttgcgccc gtcggcccca acggccagct
     6301 ggcaacccag catcgtgccg tccgcaaggg tgaaagtgac cttggcagcg tcgatgctta
     6361 tcgaccgcgc cgcaattgca acgtgggtga gggacggcat cgtggcgacg cggccccaca
     6421 gggcggcaac gagatgggtg ttctcgatat tccaggcaaa tgcttcgagc ccgatctcag
     6481 ccgcttcaaa ccgcatctcg ggggcgcgcc atagccggcc ggtgtcgtcc gcaatgcgca
     6541 tcacgcgcag cggcgctgca taagtgcgac agcgcgacca cacgccaagc gcttcgagcg
     6601 ccttgaccga cggcgccatg agggcggtgg tgcgattgtc gatgcggtcg ggtcgaggcg
     6661 cgaccagcac ggtaggtacc ccgaaatgtg caagtgcaag cgccgccatc aatccggcgg
     6721 ggccgccgcc gatcactgcg accgaggtgg tttgtgcgga aggccgcgcc gatgccgaac
     6781 gttcaagctg cgtcgtcatt gtgtcgatct caccgaggcg ccggcctcac gcagtcggcg
     6841 cgccatggcg ccccggtcat tccgggcgcc gttgccgcgg ctttatgcga aatgctagtg
     6901 ctcgtccacg ccccccttcg gtaatcccag cccgagagcg cctgttcgca ataggctagc
     6961 cgcacaatct cgatagcatt cgtcgctacg gcttcgatat gttcaacaga tgcaagcgca
     7021 cagtcgcctg gctgcgtgac gccattttcg ttttgcgccg gctgcgatac cgtcggtgca
     7081 aaccggaaaa gtctgcgcca ttcactacct gaccgccggc gctattttca gacaaaaggt
     7141 tgtggtccat ccgcgcggtg gaatctatgg tactacgaac gagacctttg gcgcctacaa
     7201 gcctaatgtc ggctttgtgg gcagagattc attccaggtg gacttcgagt acgagagagt
     7261 cggacaacgc ttcgtcacgc acgcgaaagc taacgtcaac gttcggcctt aacgtcgtcc
     7321 cttgccattt attcacaaaa acgtcgaccg ttgaaaacga agcaaacggc cgagtctcgt
     7381 acacgagccg catgcgggcg aggcgcattc atgcgatgca gggtagtacg gggcggcacg
     7441 gtctcgatgt tgatgtcgac gaacctggct gacgccgcct gttcggaggg cgtggccgtg
     7501 aagctgaccc ggcacgtacc gccaggagcg acgcgaatcg acaatcgctc gacacaccct
     7561 tcgcacagca cggcggctgg cacccgacac acagccgccg ccaccggttg ataccaggca
     7621 acaactccga tcagggcaac ggcgaggaac cgggccttga aaccaatttc gatcacggct
     7681 cgacccggtc gtatcgacac agccacgatt tgagcaagtt gcatcttcgg cagacatgtc
     7741 cgttgcatcg gaaattcctt gtgcttcgat gcttcaacgg tccgcatcgc gtccccgatg
     7801 ctctcattcg caaaattgcc ggccgttgaa gttgaaacag ccgcgaccgg agcgaccggt
     7861 cgccggcgct tcagttcgat gtggccgcgg gctgctgttg gcaatggtgg ggcgagcggg
     7921 cttcggctcg ccgcgcggta cgcagtttcc gtcgcggtcg agcacctcgg tggcggcgca
     7981 ggtctt
//
LOCUS       DATILV010000593         4239 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_138879, whole genome shotgun sequence.
ACCESSION   DATILV010000593 DATILV010000000
VERSION     DATILV010000593.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4239)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4239)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4239
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138879"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..934
                     /locus_tag="VLJ17_13835"
     CDS             <1..934
                     /locus_tag="VLJ17_13835"
                     /inference="COORDINATES: protein motif:HMM:NF013502.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HSV24094.1"
                     /translation="RHRPDLITMDMMMPVMTGLAATEFIMAHQPTPILIVSASINRGE
                     LFKIYDALAAGAVDVLEKPTGEEFDGVWEQRLLSAVKIVAKIKVITHPRARLASCRKF
                     SDALSSRPPAQRPDQLFDVVAIGASTGGPGAIVEVLRKLPARFQVPILIVLHMNEPFG
                     SAFTDWLDAQIERRVINPENGASVASAKGCVVVAPCGRHLIVRNGRMFLTLDEERHSC
                     RPSVDVLFESIAADYGACAAACLLTGMGKDGALGLLKIRNCGGIAIAQDEASSVVYGM
                     PREAMNLGAATHVLPLGDIGPRLAVLQGVGMEPT"
     gene            934..2970
                     /locus_tag="VLJ17_13840"
     CDS             934..2970
                     /locus_tag="VLJ17_13840"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV24095.1"
                     /translation="MTGPVLIVDDSMTVRMNLVEMFNSIDLPAVACSTLAEARQALVK
                     DTFSLIILDVLLPDGDGIELLQEIRAMPSATATAVMMLSTETEVRDRVRGLTTGADEY
                     VGKPYDPSYVIGRARELVRRGCAVPPHAQDTILLIDDSITFREELKSVLEQASYRVVV
                     AASGEEGLRLAADVRPSGIVVDGMLPGIDGATFIRRIRLDAALRGLPCFLLTGLEDRS
                     AEVRALDAGADAFALKEESIDVIIARINAMLRAAGDQSSQRGASSLQGPKKVLAVDDS
                     ETYLHELADALRSDGYEVILARSGEDALELLAVQSVDCVLLDLLMPGIGGRETCRRVK
                     AVPTMRDIPIIMLTAVEDRDAMIQGLSLGADDYIAKSSDFDLVRARVLAQIRRKQFEN
                     EHRAIREQLLRVEHEAIEARSALEAAESRAALAQELEIKNEELESFSYSVAHDLRAPL
                     RSIDGFSLALLEDGAEKLDEECKKHLCYIRESAQYMARLIDDLLALSRVTRGELDRAE
                     TDLSSIARSVASRLARAAPRRPVELVVADGLVADCDDRLLTIVFENLLGNAWKFTGKC
                     DNARIEVGATSTSPRTYFVRDNGAGFNMSYVSQLFGVFQRLHSAAEFEGTGIGLVTVQ
                     RIIRRHGGRIWAEGAVGKGATFFFTLEGGSRVSALTTASRSTTTPARELLHHDV"
     gene            2960..3427
                     /locus_tag="VLJ17_13845"
     CDS             2960..3427
                     /locus_tag="VLJ17_13845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003507648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV24096.1"
                     /translation="MMCDKTILLVEDNPADEALTLRALKKANIANQVVVARDGVEALD
                     YLFSTQTNGAPNILPQLILLDLKLPKLDGEEVLKRIRGDERTRLLPIVILTTSVEDQD
                     RFKCYRLGANSYVRKPVDFTEFAQAVVQLGLYWLVLNEEPPTWQTQTPSAPRR"
BASE COUNT          879 a         1196 c         1268 g          896 t
ORIGIN      
        1 gcggcatcgc ccggatctca tcaccatgga tatgatgatg ccggtcatga ctggtctggc
       61 cgcgaccgaa ttcatcatgg cgcaccaacc gaccccgatc ctgatcgtgt cggcatcgat
      121 caatcgaggc gagttgttca agatttatga cgcgctcgcc gcgggggcag tcgatgtgtt
      181 agagaagcca accggagagg aattcgacgg tgtctgggag caacgcctgc tctcggccgt
      241 gaagatcgtc gcgaaaatca aagttatcac ccatccgcgc gcccgtctgg cgtcgtgcag
      301 aaagttctcg gatgcacttt cgagccgccc cccagcgcaa aggccagatc agttattcga
      361 tgttgtcgcc attggagctt cgaccggcgg gccgggcgcg atcgtcgagg ttctccgcaa
      421 gctacctgcg cgttttcagg tgccgatcct gatcgtgttg catatgaatg aacccttcgg
      481 gtcggccttt accgactggc tcgacgcaca aatcgaacga cgcgtgatca atccggaaaa
      541 tggagcttcc gtcgcttcgg caaagggctg cgtcgtcgtc gctccctgtg gccggcatct
      601 catcgtgcga aacggacgca tgttcctcac cctggatgag gaacggcact catgccggcc
      661 gtcagtcgac gtgctgtttg agtcaattgc tgccgattat ggcgcatgcg cggctgcttg
      721 tttgttgacc gggatgggca aggacggggc actcggcctg ctcaaaatcc gcaattgcgg
      781 cggcattgct attgcgcagg acgaggcgtc gtcggttgtc tacggcatgc cgcgcgaggc
      841 gatgaacctg ggcgccgcca cccatgtgct tccactcgga gacattggcc ctcgccttgc
      901 ggttttgcag ggagtaggaa tggagcccac ctaatgaccg gcccggtgct tatcgttgat
      961 gacagcatga cggtgcgcat gaacttggtc gagatgttca actccatcga ccttccggcc
     1021 gtcgcatgct ctactctcgc agaagcaaga caggcactgg tcaaggacac attctcactc
     1081 atcattctcg acgttctatt gcccgatggt gacggcatcg aactgctcca ggaaattcgc
     1141 gccatgccgt cggccaccgc gaccgccgtc atgatgctgt cgacggaaac cgaggttcgt
     1201 gatcgcgttc gtggactgac caccggtgcc gatgagtatg tgggaaagcc gtatgatccg
     1261 tcatatgtga tcggacgcgc ccgcgaactc gtgcgtcgcg gctgcgccgt gccgccgcac
     1321 gcgcaggaca ctatacttct tatcgacgac agcatcacct ttcgcgagga gctcaagtcg
     1381 gtcctggaac aagcctccta tcgcgtcgtc gtcgccgcaa gcggggaaga aggcctgcgt
     1441 ctggcggcag atgttcgtcc atccggaatt gttgtcgacg gaatgctgcc gggtatcgat
     1501 ggagcaacat tcatcaggcg cattcgcctc gatgcggcgc tgcgagggct gccgtgcttc
     1561 cttctcactg gtttggagga tcgcagcgcg gaagttcgtg cgctcgacgc aggggcagac
     1621 gcgttcgccc ttaaggagga gagtattgac gttatcatcg ccaggattaa cgccatgctg
     1681 cgggcggcgg gtgaccaatc cagccagcgc ggcgcctcga gcctgcaggg gccgaagaaa
     1741 gtgttggccg tcgatgacag cgagacctac ctgcatgaac tcgccgacgc gttgcgctcc
     1801 gacggttatg aggtaatcct ggcccgttcc ggcgaggacg cccttgaact gctcgctgta
     1861 caatctgtgg actgtgtgct gctcgatctc ttgatgcctg gcattggtgg acgggaaaca
     1921 tgtcggcgcg tcaaagccgt gccgaccatg cgcgacattc ccatcatcat gctgacggct
     1981 gttgaggatc gtgatgccat gatccagggc ctgagcttag gcgcggacga ctacatagcg
     2041 aaatcaagcg atttcgatct ggttcgtgcg cgcgtgctcg cacagatcag acgcaagcag
     2101 ttcgagaacg agcatcgtgc tatccgcgaa cagctccttc gcgtcgaaca tgaagctatt
     2161 gaagcacgaa gcgcgcttga agcggcagag tcgcgagctg cgcttgctca agagctcgag
     2221 ataaagaacg aagagcttga gtcattcagt tattccgtag ctcacgacct tcgcgctccg
     2281 ttgcgcagca tcgacggatt tagtttggcg ctattggagg acggcgccga aaagctcgac
     2341 gaagaatgca agaagcatct ttgctatata cgtgagtcgg cgcagtacat ggcccgtttg
     2401 atcgacgacc tactcgccct gtcgcgggtc actcgtggtg aacttgaccg cgcggagacc
     2461 gacctgagtt cgattgcacg cagcgttgcg tcgcgcctcg cgagagcagc gccacgtcgt
     2521 ccagtcgaat tagtagttgc cgatggcctt gtggccgact gcgatgacag gttgcttacg
     2581 atcgtttttg aaaatctcct tggcaatgcc tggaagttca ccggcaaatg cgataatgcg
     2641 cgcattgaag tcggcgcgac cagtaccagc ccgcgaacct acttcgttcg ggacaacggg
     2701 gccggcttca acatgtcata tgtatcacag ctattcggcg tctttcagcg cttgcattcg
     2761 gcggccgaat ttgaaggcac gggcatcggc ctcgtcacag tgcagcggat catccgcagg
     2821 cacggaggtc gtatttgggc cgagggcgcc gtgggaaagg gcgctacatt cttctttacg
     2881 ctcgagggcg gctcgcgggt gagtgccctt acgacagcat caagatcaac cacgacgcca
     2941 gcgagagagt tgctgcatca tgatgtgtga caaaaccatc ctgctggtcg aagacaaccc
     3001 tgccgatgag gccttgaccc tgagagcgct caagaaagcc aatatcgcca atcaggtggt
     3061 ggtggctcgc gacggcgtcg aggcgcttga ctacctgttt tcgacgcaaa cgaacggcgc
     3121 acctaatata ctaccgcagc taattctgct ggatttgaag ctaccgaagc tcgacggcga
     3181 agaggtcctg aaacgaattc gcggtgatga gcggacccga ctcctgccga tcgtcattct
     3241 tacgacatcc gtggaagatc aagatcgctt taaatgctat cggcttggcg ccaacagcta
     3301 tgtccgcaag cctgtggact ttacagagtt tgcgcaagcc gtcgtacaac tcggactcta
     3361 ttggctggtg ctgaacgagg agccgcccac ttggcagacg caaacacctt ccgcgccacg
     3421 acgatgagcc gatacgcagc atgaaccgag actgtctcgc tcgcggcggt gttggaaata
     3481 accgtacgct cgcggttgtg ctcaacgagc atcgctcagc gacatcgaac ctgtgaaagt
     3541 ggcctgggcc gaagcaccgc acggtagcat ggtgatcggt tctaacgaag gcccgatgat
     3601 gtgtataaaa catcttccaa ttacctctgg gtcgtcaaag tggtgaatat gactggcgct
     3661 ataattcgtc ttgagcggcg aatcttgcag cgggtatctg ggatacggcc tgatgtacaa
     3721 actgggatac agcggctcga tagcaggaga aacatatcaa tcatattgat tactggttga
     3781 ggttggcgtc gtcactgcga tcagcgggaa ggtttgcaca gcgctccgtc gcctgtctca
     3841 agaggaaata gcgcgagagc aattacacat cgtggtcaga gcgcgaagga tgtgagaacg
     3901 cgcgcaacca cgaaccagaa gcgccctctc ggccccacaa atgactgctt gcggtgtgcg
     3961 ccggcggcgc ctggtcgcgt ttctgctgag caacacaaag cgacgtcgct cgctctcgcc
     4021 gctgtacggc aaacatgcgc aagaggagac gttttcattg attgcgctac tgtggcgcgg
     4081 tgtcatgcaa atttttcggt aagcttcgga tagagcgcat cgacctcttc ctcggaccac
     4141 tcttggcctg aagggctttg tgggtgaggc accgctcgtg gagggcgttt acccgccgcg
     4201 gcttcaacac cctcggaaac ggcatattgg tagccctcg
//
LOCUS       DATILV010000594         3498 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2185742, whole genome shotgun sequence.
ACCESSION   DATILV010000594 DATILV010000000
VERSION     DATILV010000594.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3498)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3498)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3498
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2185742"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..368
                     /locus_tag="VLJ17_13850"
     CDS             <1..368
                     /locus_tag="VLJ17_13850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24097.1"
                     /translation="VAIVDAPTYRSTCCWRADASVDRAQYKIHENAKRWARGREIAAS
                     HQASPATIAARTDRRAPLEFHLAPRQARYAALRQKWARGALVGKMNGQIMAHAAFSKA
                     GGFDGDFDNLLNEAARGIR"
     gene            complement(754..1482)
                     /locus_tag="VLJ17_13855"
     CDS             complement(754..1482)
                     /locus_tag="VLJ17_13855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR family transcriptional regulator"
                     /protein_id="HSV24098.1"
                     /translation="MEIFEFVECSNRTKSLPELFNLLVKAADKEGFGQVAFGALTYHE
                     PVHLAGNAAPAIALNFPSDWTKHYFEHKYYEVDPVVVFTPGIARPFLWAWLEQRHLEP
                     KQQRILDEANEAGLKNGVSVPLHGPWGRVAVVSFASDCEAADPEAKLGRLNALASQFH
                     VAFTDISQGARFANVPVRLSHREKDCLTWTAQGKSSWDIGMILNISENTVNFHVKNAM
                     RKLDTTSRTVAVVKSIRLNLIQLP"
     gene            2029..2652
                     /locus_tag="VLJ17_13860"
     CDS             2029..2652
                     /locus_tag="VLJ17_13860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006610030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-homoserine-lactone synthase"
                     /protein_id="HSV24099.1"
                     /translation="MSIVCVNWESAHLHGEAWISHHRLRHRLFVERQRWQVPSHNGLE
                     YDQFDTPAATYVLWLDDRRQARGVTRLIPTTQSYMVETLWPDMLSDPLPRTPAIWEAT
                     RFGCDRDLDTRTRRRVVAELICGCQEFGLANGISKYIGVMPLPIFTHVIAAAGCSVTL
                     LGPTRRIGHHLVAAAYIDISARTLAAVRYRNGIEARVLPAERLPRVA"
     gene            complement(2696..3430)
                     /locus_tag="VLJ17_13865"
     CDS             complement(2696..3430)
                     /locus_tag="VLJ17_13865"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HSV24100.1"
                     /translation="MRRWSESNSDHARVYNEIKAMVIDYRFRPGEQLRIGELADRLRV
                     SSTPIREALIRLQAESLLDPVPRRGFFAKTLTSREMIDLYQFGFLIVKQTLERHFDAI
                     DIATCDGLVSAHGATVASDQAPDQPERPARRYARYLEQLYEKVVFLSRNEVMIATIRN
                     FVDRTHYVRVIDLEVPRRYDNALHAISEILAALEQRDVGRIIATLERELSLKIAIMPA
                     LVREGVSRAYTSVDAPPRTTAIASTA"
BASE COUNT          729 a         1068 c         1014 g          687 t
ORIGIN      
        1 acgtcgcgat cgttgatgca ccgacctacc ggtcaacttg ttgctggcgg gcagatgcaa
       61 gcgtcgaccg tgcgcaatac aaaatccacg aaaacgcgaa gcgctgggcg cgcggccggg
      121 agatcgcggc aagccatcag gctagccccg ctaccatcgc ggcgcgaacc gatcggcgcg
      181 cgccgttgga gttccatctg gcgccacggc aggcgcgcta cgcggcgttg cgccagaagt
      241 gggcgcgagg ggcgctggtc ggaaaaatga acggtcagat catggcccat gcggctttca
      301 gcaaagcggg cggcttcgac ggcgacttcg acaatctctt gaacgaagct gcgcgcggaa
      361 ttcgataggg gtgacaacgc tacgcggcaa aatcaaacca ctggtatgcg aacgttgtac
      421 cgctgcgttc gggtgcggag gtggccgcta tctagaggcc gcagccgtga gaggcgaacg
      481 cgctggatcg ctagtaccaa cccagttgtg gacgggtgtt aaaccacgcc ccccacacac
      541 gctcccttcg gctcggaaac gttgatgtgc aatgactgcg ctctgtaccc cagcgcggac
      601 cacgaacaat gatcgcacac gccgtcgggg atggcagatc gaggccaaaa ggctgtgctt
      661 gctcaaactc cgaaagaccg agagagccta gcccagaaac atattccacg atcagccgcc
      721 accgatttca acgccaaatg catttgagca cggtcaaggc agctgaataa gattgaggcg
      781 gatcgacttg acgacggcga cggttctgct cgtcgtatca agctttctca tcgcgttctt
      841 gacgtgaaaa ttgacggtgt tctcgctgat gttcaggatc atgccgatgt cccacgacga
      901 cttgccctgc gccgtccagg tcaggcaatc cttttcgcgg tgagacagcc gaactggaac
      961 gttggcgaag cgtgcgcctt ggctgatgtc ggtgaaggcc acatggaatt gcgatgcgag
     1021 cgcattgagg cggcccagtt tcgcttccgg gtcggctgcc tcgcagtcgg acgcgaacga
     1081 gacgaccgcg acgcggcccc acggcccgtg gagcgggacg ctgacgccgt ttttcaaccc
     1141 cgcctcgttc gcttcatcaa ggatccgctg ttgcttgggc tccaggtgcc gttgctcaag
     1201 ccacgcccac agaaatggac gggcgatgcc aggcgtaaaa accacgacgg gatcgacctc
     1261 gtagtacttg tgttcgaaat aatgcttggt ccaatcggat ggaaaattga gcgcgatcgc
     1321 cggcgcagcg ttgcccgcaa gatgcaccgg ctcgtgatag gtcagagcgc cgaaggcaac
     1381 ctgaccgaac ccctctttat ctgctgcctt gaccagaaga ttgaacagtt cgggcagaga
     1441 tttcgtacga ttcgagcatt caacgaactc gaagatttcc attgtcccgc gctccggacc
     1501 cccatccctg gagttcaccg acgctcttag tgggggcgga cgacaatgcg accgatcaca
     1561 tgcgcaaacg ccccaggatc aaatttccta cccacaattg cccaaattgc ccatattaaa
     1621 acataatggc ataatcttaa cctatatcaa tttctgattg tgtgctaccc ttttggcggg
     1681 atgaagatga atgccaccca tgcagtttcg atggaactgg aagcattcat ccggcggaat
     1741 aaatgaattt tgcacgtcga caatgtagat agtgctgacg ttctagaagt actacgtcgt
     1801 taccgtgcgt cacttatagg tggtggactt ttccaccaac accccaagat cgtcggatta
     1861 gccgtctgcg tatcgagcaa cgcgaggaat tcatggcaag acggcccaag cttgtccgca
     1921 agtctgaggc cgtgtacccc aacactaccc aactagatag gtccacacag atcgtgcagt
     1981 gcggcatgaa catcggagat ccgcccgcga gttgcacgcg agttgcagat gtcgattgtt
     2041 tgcgtcaatt gggagtcagc gcacctccac ggtgaggcgt ggatctcgca tcatcgcttg
     2101 cgtcaccgcc tcttcgttga acgccaacga tggcaagtgc cgagtcacaa cggcctcgaa
     2161 tacgaccagt tcgacacgcc ggcggctacg tacgtccttt ggctcgacga tcgccgtcag
     2221 gcccgtggcg tgacccggct gatcccgacg acgcagtcct acatggtcga gacgctatgg
     2281 ccggacatgc tcagcgaccc gcttcctcgg acccccgcca tctgggaggc gaccaggttc
     2341 ggctgcgacc gcgatctcga tacgcgaacg cgccggcggg tggttgcgga actgatctgc
     2401 ggttgccagg agttcggcct ggccaatggc atttccaagt acatcggcgt catgccgctg
     2461 cccatcttca cgcacgtcat cgccgcggcc ggctgcagcg tgaccctgct cgggcccacc
     2521 cgacggatcg ggcatcatct ggtggctgcg gcctatatcg acatctcggc gagaacgctg
     2581 gccgccgttc gatatcgcaa tggaatcgaa gcgcgggtac tcccagcgga acgcctgccc
     2641 cgcgttgcct gacattggca cgcccctcca tgcgccgaaa cgtgctccga catcgtcatg
     2701 ccgtgcttgc gattgcggtc gtcctcggcg gcgcgtcaac cgacgtgtag gcgcggctga
     2761 cgccctctct gacgagcgcc ggcatgatcg cgatcttcag actgagctcc cgctccagcg
     2821 tcgcaataat acgcccgaca tccctctgtt cgagcgcggc gaggatttca ctgatggcgt
     2881 gcaacgcgtt gtcatagcgc cgaggcacct ctagatcgat cacgcgtacg tagtgcgttc
     2941 ggtcgacgaa gtttcgtatg gttgcgatca tgacttcatt gcgcgacaaa aacaccacct
     3001 tctcgtacag ctgttcgagg taccgagcat aacgccgcgc cggccgctcc ggctggtctg
     3061 gggcctggtc agatgccacg gttgcgccgt gtgccgacac taatccgtcg cacgtggcga
     3121 tatcgatggc atcgaaatgc cgctcgagcg tctgcttcac gatcaaaaag ccgaactgat
     3181 agagatcgat catctccctg gacgtcagcg tcttggcaaa gaaccccctt cgcggcacag
     3241 ggtcgagcag gctttcggcc tgcaggcgta tcaacgcttc gcggatcggc gtcgagctga
     3301 cgcgcagccg atcggcgagc tcgccgatcc gcagctgctc gccgggacga aagcgataat
     3361 cgatgaccat cgcctttatc tcattgtaca cacgggcatg atctgagttg ctttcggacc
     3421 accgcctcac aagagcctct ccgctgtggt tctcgaatca ggccgaaacg acgacgaaga
     3481 gcgtttccgg gccgcctc
//
LOCUS       DATILV010000595         2054 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1420946, whole genome shotgun sequence.
ACCESSION   DATILV010000595 DATILV010000000
VERSION     DATILV010000595.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2054
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1420946"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..84)
                     /locus_tag="VLJ17_13870"
     CDS             complement(<1..84)
                     /locus_tag="VLJ17_13870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HSV24101.1"
                     /translation="MPAPIVALVDLHLPPRGALIGLDLGTKT"
     gene            294..992
                     /locus_tag="VLJ17_13875"
     CDS             294..992
                     /locus_tag="VLJ17_13875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018181247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HSV24102.1"
                     /translation="MQITWYGHSAFRLDFAGKAVLIDPFFTGNPAFVSDKAAAIRGIT
                     HIVLTHGHADHVGDAVDISAATGAPVITNYDLCMWLAGKGLQKFDPMNTGGTTDQGGF
                     TVTLVRADHSSGDITNGMPIYLGNPCGAIIKAVGEPVVYHMGDTDIFSDMGLIAEIHQ
                     PKVAMVPIGDRFTMSPQTAALAVKRFFKLDKVIPCHYGSFPIIEPSADKFVAEMKGHA
                     TVVVVPEKGKAVTA"
     gene            complement(998..1573)
                     /locus_tag="VLJ17_13880"
     CDS             complement(998..1573)
                     /locus_tag="VLJ17_13880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007591877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HSV24103.1"
                     /translation="MVTDRRIFLSIMAGLLATPARAQAPAMSRITAFAFHFAGLKGGD
                     IQLAEHAGKPILIVNTASQCGYTPQYAGLQELWTRYRDRGLLIVGVPSNDFGGQEPGD
                     AAEIAKTAEHQYGASFPIAAKAVVNGAGSHPFYKWASAQRPLDRPRWNFHKYLIGRDG
                     MIAASFPSEIEPTDARVIAAIEKELARVMTN"
     gene            complement(1677..>2054)
                     /locus_tag="VLJ17_13885"
     CDS             complement(1677..>2054)
                     /locus_tag="VLJ17_13885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyalkane--coenzyme M transferase"
                     /protein_id="HSV24104.1"
                     /translation="VHDMELKDIVHLILEIRAGAFSFEAANPRHEHEWKVWENVKLPD
                     GAVLIPGIISNSTILVEHPELVAQRIGRFAKLVGRDNVIAGSDCGFATFASSKEIHAS
                     IVWAKLQALAEGARIASRELWGR"
BASE COUNT          402 a          638 c          627 g          387 t
ORIGIN      
        1 cgtcttggta ccgagatcga gcccgatcag cgctccacgt ggcggcagat gaaggtcgac
       61 aagcgcgaca atgggggcag gcatgggcgg atcgtccctt gctgtcatca gccgcgaaag
      121 cgggcgatcc agtaaccacc ggagagcact ggatgcccgc tttccgcggg gcatgacact
      181 tctgactgga atcgaagcga taaagacggc attctaacat agcccagtgc gcgttgatcg
      241 cggcaacgca ttgcgtattt tggcgcccac cgcccaaccc aaggatcacc gtcatgcaga
      301 tcacctggta cggccactcc gccttccggc tcgattttgc cggaaaggcc gtgctgatcg
      361 atccgttctt cacgggcaac ccggccttcg tatccgacaa ggcagcggcc atcaggggca
      421 taacccacat cgtgctgacg cacggccacg ccgatcacgt gggcgacgcc gtcgacatct
      481 cggccgcgac cggcgcgccg gtcatcacga attacgatct gtgcatgtgg ctcgccggca
      541 agggcctgca gaaattcgat cccatgaata ccggcggcac caccgaccaa ggtggcttca
      601 ccgtgacgct ggtgcgtgcc gaccactcct ccggcgacat cacaaacggt atgccgatct
      661 atctcggcaa tccgtgcggc gctatcatca aggcggtggg cgagcccgtc gtctaccaca
      721 tgggcgacac cgacatcttc tccgacatgg gcctgatcgc cgagatccac cagccgaagg
      781 tcgccatggt gccgatcggc gatcgtttca ccatgagccc gcagaccgcg gcgcttgccg
      841 tcaaacgctt tttcaagctc gataaggtga tcccctgcca ctacgggtca ttcccgatca
      901 tcgagcccag cgccgacaag ttcgttgccg agatgaaggg gcatgccacc gtggtggtgg
      961 tgccggagaa ggggaaggcg gtgaccgcgt aggagcctca gttcgtcatt acccgcgcaa
     1021 gctccttctc gatcgccgcg atcacacgcg catcggtcgg ctcgatctcg gaggggaagc
     1081 tcgccgcgat catgccgtcg cgcccgatca gatacttgtg gaagttccag cgcggccggt
     1141 cgagcggtcg ctgcgctgat gcccatttgt agaaggggtg ggagccggcg ccgttgacca
     1201 cggccttagc tgcgatcggg aagctggcac cgtattgatg ttcggcggtt ttggcgattt
     1261 cggcggcgtc acccggctct tgtccgccga aatcgttgga ggggacaccg acaatcaaca
     1321 ggccgcggtc gcgatagcgc gtccacaatt cctgcagtcc ggcatattgc ggcgtgtagc
     1381 cgcattggga cgcggtgttg acgattagga tcggcttgcc ggcatgttcg gcgagctgga
     1441 tgtcgccgcc cttgaggccg gcgaagtgaa acgcaaaggc cgtgatacgg ctcatcgcag
     1501 gggcttgcgc acgcgcgggc gtcgctagca atcccgccat gatggaaagg aaaatcctgc
     1561 ggtcggtgac catgacgcgt ctcccaatga ggtttccgga ttctgttgcg gagaataaca
     1621 gaaattacga acggcttcca tgtgcgaatg gctgacgaga tcgggaactg ccgccctcaa
     1681 cgtccccaca gttcccggct ggcaatccgc gccccctcgg cgagggcttg cagcttcgcc
     1741 caaacgatgc tggcatggat ttccttcgag cttgcgaagg tcgcaaatcc gcaatccgag
     1801 ccggcgatca cgttgtcacg gccgaccaac ttggcgaacc gaccgatgcg ctgggcgacc
     1861 agctctgggt gctcgaccag gatggtggag ttggagatga tgccggggat cagcaccgca
     1921 ccgtctggca acttcacatt ctcccacacc ttccattcgt gctcgtggcg cgggtttgcg
     1981 gcctcgaatg aaaatgcacc ggcacgaatt tccaaaatca gatggacgat atccttcaat
     2041 tccatgtcgt gaac
//
LOCUS       DATILV010000596         1555 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1933615, whole genome shotgun sequence.
ACCESSION   DATILV010000596 DATILV010000000
VERSION     DATILV010000596.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1555)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1555)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1555
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1933615"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(786..>1555)
                     /locus_tag="VLJ17_13890"
     CDS             complement(786..>1555)
                     /locus_tag="VLJ17_13890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010970229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSV24105.1"
                     /translation="PTTTGKFVWYDVMTTDTKASETFYRHVMGWDAKDSGMPDRCYTL
                     LSAGSTMVGGLMPIPEDARRVGVKPAWMGYIGVDDVDASAERIKKAGGAIHRGPEDIA
                     GIGRFAVAGDPYGAGFMLFAANSDQQPVPVSPGTPGHVGWHELYAGDREGAFAFYSGL
                     FGWTKAEAVESPAGLYQTFATGGAPIGGMMTKPRQVPKSGWLFYFNVDAIDAAMGLAQ
                     AGGGEVLHGPMQVPGGSWIAQCRDPQGAMFAMVASKR"
BASE COUNT          299 a          479 c          450 g          327 t
ORIGIN      
        1 agccgcgatc ttgcttttcc tggacataac cattctcctc tgattcatcg ttaagatcac
       61 cgtgagatca caaattctga ccacgctagc cgtctgggac gttggtctgc gcatcgcgag
      121 cgatgtggtg atcggcccgt cattttgctg gtcgcgggca ccagccatgc atcgcggcat
      181 gacgcacggg tcgccatccg aaactcatgg gtcaccaccg caatgaaatg agttgagttt
      241 tggggttaat gcgtcgctgg cgcatcatca tgcgctgtgc aagtgccagt catgcaggtg
      301 cggcacgatt gtggcgacga tctcagcggt cgtcattcgg ttcatatttg agaatgttcg
      361 taaaaggcac ggtcgcgcgc tttcatggac ccacatagct cgccagcaac tccagcggtt
      421 tcggagacgg ctgcaagcac gacaggtgga aactaaagcg gtgagaaccg gtagcactgg
      481 ccgccatttc ggcgaaatag ccgggcacca aactgtgatg tgagacaacg atcactctgg
      541 ctgtgggtcc gtactggcca acgcatggta gggttgccgc gcaggttggc gcctgtcgtt
      601 cacattagaa tcgccccaga acacacgctt cgcgtcgaac ggcacggctc gcgttcattt
      661 ccaagaaata tcagcatatc ctccgcgtcc atcgcctcgg cgttgacctc gtcgcgatgg
      721 acgcccgagc ccttctgtcg cggtgcattg ctcgccatct ttagagcccc cgttgcgagc
      781 gccactcacc ttttggacgc aaccatcgcg aacattgcgc cttgcgggtc gcgacattgg
      841 gcgatccagc taccgccggg aacctgcatc ggaccatgta gcacctcgcc gccgccggcc
      901 tgcgctagcc ccatcgctgc gtcgatggca tccacgttga aatagaagag ccatccggac
      961 ttaggcacct gacgcggctt tgtcatcatg ccgccgatcg gtgcgcctcc ggtcgcgaac
     1021 gtttgataaa ggccggcagg gctttcgacg gcttccgctt tcgtccatcc gaacaggccg
     1081 gaatagaagg cgaaggcgcc ttcccggtcg cccgcataga gttcatgcca gccgacgtgg
     1141 ccgggtgtgc ctggcgatac cggcacgggc tgttgatcgc tgttggcggc aaataacatg
     1201 aatccagcgc cataggggtc gccggcgacg gcgaaacgtc caatgcccgc aatgtcctcc
     1261 gggccgcggt ggatggcgcc gccagctttc tttatgcgtt cagcggaggc atcgacatcg
     1321 tcgactccga tgtagcccat ccaagccggc ttgacgccga ctctgcgtgc atcctctggg
     1381 atcggcatca acccgccgac catggtcgag cccgccgaaa gcagcgtgta gcagcggtca
     1441 ggcataccag aatccttcgc gtcccagccc atcacgtgtc ggtagaatgt ctcggaagct
     1501 ttcgtatccg tggtcatcac gtcgtaccag acgaattttc cggttgtcgt tggca
//
LOCUS       DATILV010000597         2922 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3212931, whole genome shotgun sequence.
ACCESSION   DATILV010000597 DATILV010000000
VERSION     DATILV010000597.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2922)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2922)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2922
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3212931"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            176..1387
                     /locus_tag="VLJ17_13895"
     CDS             176..1387
                     /locus_tag="VLJ17_13895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011237251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISAzo13 family transposase"
                     /protein_id="HSV24106.1"
                     /translation="MMSLADLKRKFRAAWPHLDERTRRIMAATEAMSLGYGGVSLVSR
                     ACGLSRKAIRKGIGELGNRGKPLVGRIRRPGAGRKAITQSDPRLIRTLESLIDAQTRG
                     DPQSPLRWICKSTRAIAAELGVHEHPVSHMKVAQILHNLDYSLQSNRKTLEGKDHPDR
                     DAQFRHINLTVKKSLEQGIPVISVDTKKKELIGNYDNAGRQWRAARQPIAVQGHDFPS
                     PEVPRAYPYGIYDIGRNAGFVNVGTDHDTGAFAVASIRGWWRAEGKRIYPNANTILIT
                     ADAGGSNGWRLRLWKLELQKFADQSAMAISVCHFPPGTSKWNKIEHRLFSFISSNWRG
                     EPLRDYETIINLIAATTTAKGLKVTCRLDRRKYPTGREVSDEQMRQVNLQPNKFHGEW
                     NYCIKPNAKAT"
     gene            1418..2500
                     /gene="tal"
                     /locus_tag="VLJ17_13900"
     CDS             1418..2500
                     /gene="tal"
                     /locus_tag="VLJ17_13900"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019863774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004801 - transaldolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HSV24107.1"
                     /translation="MKATQTLHDRGQSIWLDNITRNLLQSGTLKRYIDELSVTGLTSN
                     PTIFDHAIKNSSAYDDSIRKKVREGKSGEDLFFELALEDLTRAADLFRPIWDRTSGVD
                     GWVSLEVSPVLAHDTQSTLAAAKDLHKRAFRRNLLIKIPGTKEGLPAIEEAIFAGIPI
                     NVTLLFSHRQYQAAAEAFLRGIERRIDAGLDPVVGSVASVFISRWDTAVKDAVPEALR
                     NQLGIAVAKQTYKAYRALLGSPRWQRVFNSGARPQRLLWASTGTKDPSASDVLYVRAL
                     AAPFTVNTMPEGTLKALADHGTVGGILTPDGGDSEEVLARFAAAGVDVEDLAARLQDE
                     GAKSFVASWRELMGVIASKNAALKAG"
     gene            2517..>2922
                     /gene="pgi"
                     /locus_tag="VLJ17_13905"
     CDS             2517..>2922
                     /gene="pgi"
                     /locus_tag="VLJ17_13905"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020629191.1"
                     /note="functions in sugar metabolism in glycolysis and the
                     Embden-Meyerhof pathways (EMP) and in gluconeogenesis;
                     catalyzes reversible isomerization of glucose-6-phosphate
                     to fructose-6-phosphate; member of PGI family; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HSV24108.1"
                     /translation="MTKPLPLTARPSWKGLQAHYEKIRDVHLRTLFADDAKRGESLNA
                     EAAGIYLDFSKNRVTDETLALLRGLAEESGLRERIDAMFRGDRINTTENRSVLHVALR
                     APRGASIVVDGKDVVPEVHKVLDAMTRFADRVR"
BASE COUNT          617 a          920 c          902 g          483 t
ORIGIN      
        1 aaccgccgac ggtaacggcg cttcgccgag cgacccaagc gccatggcca cctttggaat
       61 ccatcacggg ccggacggta tcatcttcat gcgcgaggac tattgatccg tgcgttagac
      121 accgtaaata aataaaggta tcaacttaca ggtccttgta ttatgcttgt tgctcatgat
      181 gagcctagcg gatttgaagc ggaagtttcg tgccgcgtgg ccgcatttgg acgagcgcac
      241 gcgacgcatc atggcagcca cggaggcgat gagcctgggc tatggaggag tgtcgctggt
      301 aagtcgagcc tgtggcctgt cgcgcaaggc gatccgcaaa gggattggcg aactcggcaa
      361 tcgaggcaag ccgttggtgg gccgcatccg ccggcctgga gcgggacgca aagccatcac
      421 acagtctgat ccgcggctga tacgcacgct ggagagcttg atcgatgcac aaacgcgcgg
      481 cgacccgcag tcgccgctgc gctggatctg taagagtacg cgcgcaatcg ctgcagaact
      541 tggcgtgcac gagcatccgg tcagccatat gaaggtggcg cagattcttc acaacctgga
      601 ctatagccta cagagcaatc gcaagactct ggaaggcaaa gatcaccccg accgcgacgc
      661 tcagtttcgg cacatcaacc tgacggtcaa gaagagcctc gagcaaggta ttccggtcat
      721 ttcggtcgac accaagaaga aagagttgat tggcaactac gacaatgcgg gtcggcaatg
      781 gcgtgcggca aggcagccga ttgcggttca gggtcacgat tttcccagcc cagaggttcc
      841 acgcgcctat ccttatggga tctacgacat tggacgcaat gccggttttg tcaatgtggg
      901 aaccgaccac gacaccggtg cgtttgccgt cgcctcgatt cgcggttggt ggcgcgcgga
      961 aggcaagaga atttatccaa atgccaacac gattctgatt acggccgacg ccggtggcag
     1021 caacggttgg cgattgcggc tatggaagct ggaattgcag aaattcgccg atcagagcgc
     1081 aatggcgatt tcagtctgtc attttccgcc cggcaccagc aaatggaaca agatcgagca
     1141 ccggctattt tccttcatct catccaactg gcgcggcgaa ccgttgcgcg actatgaaac
     1201 gatcatcaat ctcatcgcag cgaccaccac cgcaaaggga ttgaaagtca cttgccgact
     1261 ggatcggcgc aaatacccga ccggacgtga ggtgagcgat gaacagatgc ggcaggtcaa
     1321 ccttcagccc aacaaattcc acggcgagtg gaactattgc atcaagccca atgccaaggc
     1381 aacttgatac ctttatttat ttacagcgcc taacacgatg aaagccaccc aaacgctcca
     1441 cgaccggggc cagagtatct ggctcgacaa catcacccgc aacctcctgc agagcggaac
     1501 actcaagcgc tacatcgacg agctgtcggt caccgggctc acctccaacc ccaccatctt
     1561 cgatcacgcc atcaagaaca gctcggcgta cgacgactcg atccgcaaga aggtcaggga
     1621 aggcaagtcg ggcgaggacc tgttcttcga gcttgcgctc gaggacttga cccgggctgc
     1681 cgacctgttc cggccaatct gggacaggac cagcggcgtg gacggctggg tctccctgga
     1741 agtgtcccca gtgctggcgc acgacaccca gagcacgctt gcggcggcca aggacctgca
     1801 caagcgggcc tttcgccgca acctcctcat caagatcccc ggcacgaagg aagggctgcc
     1861 ggccatcgag gaggcgatct tcgccggcat cccgatcaac gtgaccctgc tcttctcgca
     1921 ccggcaatac caggccgccg ccgaggcctt cctgcgcggg atcgaacggc ggatcgatgc
     1981 cggcctggat cccgtggtcg gctcggtggc ctcggtgttc atcagccggt gggacacggc
     2041 ggtcaaggac gccgtgcccg aggccctgcg caaccagctc ggcatcgccg tcgcgaagca
     2101 gacgtacaag gcgtaccgag cgctcctggg ctccccccgc tggcagagag tcttcaactc
     2161 cggcgcgcgc ccgcagcgcc tgctctgggc cagcacgggc accaaggatc ccagcgcctc
     2221 ggacgtcctc tacgtgcgcg cgctcgccgc gccattcacc gtgaacacca tgcccgaggg
     2281 aacgctgaag gcgctcgccg accacggaac ggtgggcggg atcctgaccc cggacggcgg
     2341 ggacagcgag gaggtcctgg cccggttcgc cgccgcgggc gtggacgtgg aggacctcgc
     2401 cgcccggctc caggacgaag gcgcgaagtc gttcgtcgcc tcctggcgcg agttgatggg
     2461 cgtgattgct tccaagaacg ccgccctcaa ggcgggctga gagagaggaa agagccatga
     2521 cgaagccgtt gccactgact gcgcgcccat cgtggaaggg cctccaggcc cactacgaga
     2581 agatccgcga cgtccacctg cgcaccctct tcgccgacga cgcgaagcgc ggcgagagcc
     2641 tgaatgcgga ggcggccggc atctacctcg acttctccaa gaaccgggtg acggacgaga
     2701 cgctggcgct gctgcgcggg ctggccgagg agtccgggct ccgcgagcgc atcgacgcca
     2761 tgttccgggg agaccggatc aacacgacgg agaaccgctc cgtcctgcac gtcgccctgc
     2821 gcgccccgcg cggcgcgtcg atcgtggtgg acggcaagga cgtggtgccc gaagtccaca
     2881 aggtcctcga cgcgatgacc aggttcgcag accgggtgcg ga
//
LOCUS       DATILV010000598         2356 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_396440, whole genome shotgun sequence.
ACCESSION   DATILV010000598 DATILV010000000
VERSION     DATILV010000598.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2356)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2356)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2356
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_396440"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..575)
                     /locus_tag="VLJ17_13910"
     CDS             complement(<1..575)
                     /locus_tag="VLJ17_13910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016556989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HSV24109.1"
                     /translation="MKEQGMANPILVTGAAGRVGGVGRILTKLLLQQGKAVRAMVRKE
                     DERAQALRDMGAQVVVGNLLDLDSMHKVIAGCEAIYFGMSVSDAYLEATVNVAAVAKH
                     HGVQVFINMSQMTLAQMSITETTASPQHKLHWLAEQTLNWSGLPVVYVRPTVLLEGFF
                     LILTADSVRESSQIRLPFGEGKTSPVAVEDVA"
     gene            complement(804..2183)
                     /locus_tag="VLJ17_13915"
     CDS             complement(804..2183)
                     /locus_tag="VLJ17_13915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014761786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-containing oxidoreductase"
                     /protein_id="HSV24110.1"
                     /translation="MTVRFDAIIIGTGQAGPPLAARLSKAGLKVAVIERKLFGGTCVN
                     TGCIPTKTLVASAYVAHTARRAAEYGIGIDGSIKVDMKRVKARKDEIIDHSRQNVEKW
                     MRELANVTVYLGHARFEGPRTVRVNDDLLEAEKIFVNVGGRALVPNMPGLNQVRYLTN
                     SSMMDVDFLPEHLIVVGGSYIGLEFGQMYRRFGSEVTVIEMGPRLIRREDEDVSESVR
                     QIFEEEGVGIRLHAECISMELRGDKVVARLGCDEGPPEVLGSHVLLAVGRIPNTQDLG
                     LDRAGIGTDDRGYIVVDDELRTNVPDIWALGDCNGRGAFTHTSYNDYEIVADNLLNGD
                     HRRVSDRIQTYALFIDPPLGRCGMTDAEIRKSGRHAMVAKYPMQRVSRAVEKGETQGF
                     IKVAVDADTKQILGAAILGTGGDEVIQILLDMMYAKAPYTTIQRSMHIHPTVAEFLPT
                     VLSNLQPFT"
BASE COUNT          496 a          696 c          644 g          520 t
ORIGIN      
        1 gcaacgtctt ccactgcgac cggcgacgtc ttgccctcac caaacggtag tctgatctga
       61 ctcgattccc tgaccgaatc cgcagtcaaa atcaggaaga agccttcgag aagcaccgtc
      121 ggccgcacgt acacgaccgg cagaccggac cagttgaggg tctgctcggc gagccagtgc
      181 agcttgtgct gcgggctcgc ggtggtttcg gtaatgctca tctgtgcaag cgtcatctgc
      241 gacatattga tgaagacttg cacgccgtgg tgcttcgcta ccgccgccac attgaccgtc
      301 gcctccagat aggcatccga aaccgacatg ccgaagtata tggcctcgca gccggcaatc
      361 accttatgca ttgaatcgag atcgagcaga ttgccgacca cgacctgcgc acccatgtcg
      421 cgcaacgcct gtgctcgttc gtcttctttt cgcaccatcg cacggaccgc tttgccttgc
      481 tgcaacagca gtttggtgag gatgcgccct accccgccga cgcgacccgc cgcgcccgtg
      541 actagaatgg gatttgccat gccttgttct ttcatgcgtc acctaatcct cagatgtgtc
      601 gaatgcgagc gttcaccagc agaaccgagt tgtcgtttga gcgtgacgtt cgatcctctc
      661 ggtaaaccca gcgtctccgc cttaccagct tctgcgatag gtttgcgagc gacttggaaa
      721 accagcgaat tccttgtttg ctgagaaagt tcaatcaatc ggccgtggca gagctgtggc
      781 taagctggtt tctggtcgag tcgctaggtg aaaggttgaa gattggacag gaccgtcggc
      841 aaaaattcgg caacggtggg atggatatgc attgaacgct gtatggtcgt atagggggct
      901 tttgcataca tcatatccag caagatttgt atgacttcat cgcctccggt tccaaggatc
      961 gccgcaccta gaatctgttt ggtgtcagca tcgacagcga ctttgataaa gccttgggtt
     1021 tctcccttct caaccgcccg actgactcgc tgcatgggat acttggcaac catcgcgtgg
     1081 cgtccggact ttcggatctc agcgtccgtc atcccgcagc gcccgagcgg cggatcaatg
     1141 aagagagcat aggtctggat ccgatcggaa acgcggcggt gatctccgtt cagaagattg
     1201 tccgcaacga tctcgtaatc gttgtaagag gtatgcgtaa aagcgccgcg gccattgcaa
     1261 tcgccaaggg cccaaatatc tgggacatta gtccgcagtt catcatccac gacgatgtag
     1321 cctcggtcat cggtgccaat accggcccgg tccagcccca aatcttgcgt gttgggaata
     1381 cgtcctacgg cgagcagaac atggctgcct aagacttccg gtggcccttc gtcgcagcca
     1441 agacgggcga cgactttgtc ccctcgcagt tccatcgaaa tgcattccgc atgcaatcga
     1501 atgccgacac cctcctcctc aaaaatctgc cggacgctct cggagacgtc ctcatcttca
     1561 cgccgtatga gtcggggccc catctcaatg acagtaactt cgcttccgaa gcggcgatac
     1621 atttggccga attccagccc gatgtaactt cccccgacga cgatcagatg ttccggcagg
     1681 aagtccacgt ccatcatgct ggagttggtg agatagcgga cttgattcag tcccggcata
     1741 ttcggcacga gcgcccgtcc gccgacgttg acgaatattt tttccgcttc gagcaggtcg
     1801 tcgttgaccc gcacggtccg cgggccctcg aagcgcgcgt ggcccaggta aaccgtcacg
     1861 ttggcgagct cgcgcatcca tttctcgacg ttttgccgcg agtggtcgat aatctcgtcc
     1921 ttgcgcgctt tcacccgctt catatcgacc ttgatggatc cgtcgatgcc gatgccgtac
     1981 tccgcggcgc ggcgcgctgt gtgcgcgacg taggcgctgg cgaccaacgt cttggtagga
     2041 atgcagccgg tgttcacgca ggtgccgccg aacagcttgc gctcgatcac ggccactttc
     2101 agcccggctt tcgacaggcg tgcggcgagc ggcgggccgg cctggccggt acctataata
     2161 attgcgtcga atcgtacggt cataggcgtg cctcctcagt tatcataaca ccaagcggaa
     2221 aaaatttgcg aaaccggata tgggaacctg gacaagtccc gttcgttcgg ataagcctct
     2281 aaataggggc agcgataaaa aaactgcaga aaggatgacg ccacgatgat cgaaatcgga
     2341 aaacaagcgc ctgatt
//
LOCUS       DATILV010000599         4752 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4743161, whole genome shotgun sequence.
ACCESSION   DATILV010000599 DATILV010000000
VERSION     DATILV010000599.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4752)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4752)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4752
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4743161"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..742
                     /locus_tag="VLJ17_13920"
     CDS             <1..742
                     /locus_tag="VLJ17_13920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aromatic amino acid ammonia-lyase"
                     /protein_id="HSV24111.1"
                     /translation="PCDRPDRNGKRLQDRYSVRCAPHVIGVLADALPWLRESIETELN
                     SANDNPIIDAEGRNVLYGGHFYGGHIAFAMDSMKNAVANLADLLDRQMALLVDSRYNN
                     GLPANLSGAQGPRAAINHGLKGLQISASAWTAEALKLTMPASVFSRSTECHNQDKVSM
                     GTIAARDSLRVIELTEQVAAALLIAVRQGVWLRCRLNRSVAPQATFKNMMDTLGADIA
                     VIEEDRKLEPDLRLLLERIRGRAWKLYE"
     gene            735..1163
                     /locus_tag="VLJ17_13925"
     CDS             735..1163
                     /locus_tag="VLJ17_13925"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HSV24112.1"
                     /translation="MNKSTSRWSAEAEIQVQFFDLDPMEVVWHGHYVRYLEVARCALL
                     DAIDYNYTQMKASGYAWPVIDMRLRYIDAATFGQRLKLRADIVEWENRLKIDYLITDA
                     ASGRRLLRGSTTQVAVDMITREMCFVSPAVLFQKLGISPS"
     gene            1211..1762
                     /locus_tag="VLJ17_13930"
     CDS             1211..1762
                     /locus_tag="VLJ17_13930"
                     /inference="COORDINATES: protein motif:HMM:NF039988.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA];
                     GO_process: GO:0044874 - lipoprotein localization to outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein carrier protein LolA"
                     /protein_id="HSV24113.1"
                     /translation="MAAAPVAKIQSMLAKPKVLCGRFDQSKQLVGLKKPLASNGRFCV
                     VADKGVLWRTLQPFPNTVRLTRDEIVHMQENRVTMRLDAKQEPAVRLINSVLFALLAG
                     DLDQIEKLFEIDGYIHDNLWKVTLKAREPALAKALSNIALDGGAYVKNITISETSGDR
                     NSILFSEIQTGEAAMTVDEAALF"
     gene            complement(1810..2106)
                     /locus_tag="VLJ17_13935"
     CDS             complement(1810..2106)
                     /locus_tag="VLJ17_13935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24114.1"
                     /translation="MLLKQRQPIPLRLIRNAVIQLQQGSVRCQNTKVGVGSAGGLRPV
                     TGTHEHDQPLLSGIDHAGEGFLKDGITFLNRQQRENIRVGRDPLTQPQIDTIRQ"
     gene            2359..4131
                     /locus_tag="VLJ17_13940"
     CDS             2359..4131
                     /locus_tag="VLJ17_13940"
                     /inference="COORDINATES: protein motif:HMM:NF015155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HSV24115.1"
                     /translation="MRVPAFSIAAQQAVIPLLEKARQAAHKAVPQVEVVAAGVILYAA
                     AAGVQASQEVSTIGFGSILGIIVLMWVTFRSLKPIALIMLSIGIGCLGALSVCWLLFE
                     RIHLLTLVFGASLIGAAQDYGTYFLCNRIAPDAQRFDSWQLLRRLLPALVLTLITTVI
                     GYMGLALTPFPGLRQMAVFSALGLIFAWLTVVFWFPLRARNGTLKSARMVDWCAISLE
                     RWPLLRLHRSTLWMAGLFIAFAAFGLSRLGVQDDIRLLQNPPKQLIEDQIKLSKLLDA
                     PTPAQFYLIRGTTSEIVLQREEMLKERLNPLIEKQVISGYQALSNWVPSSRVQAARRA
                     LIDQKLLNEEGPLAALAAQIGEDGNWVVTTRTHLLAAASPLTPGDFLKTPASEPWRHL
                     WLGRLDGGYGSIVALRGLTRASLPLLQRAAAGLDGVQWVDKVGEISSVLGRYRKYMAW
                     VVLISYVAVYGLLYSRYRKTTWRVLAPTALASIATLALLGIAGQNLQLFHVLALMLLL
                     GVGVDYGIFLHEHPSRRDATAWLAVGLSALSTLLSFGLLSLSKTPALQAFGLTMLIGT
                     NTVWLIVPCFRNDPIQQDESGTKP"
     gene            4128..>4752
                     /locus_tag="VLJ17_13945"
     CDS             4128..>4752
                     /locus_tag="VLJ17_13945"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024240.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSV24116.1"
                     /translation="MKRFGGGPVMFDSWEKKARKSVEILVIGAGPAGSVAAALLRQQG
                     RQVLVLEREQFPRFSIGESLLPQSMEYLEQAGMLRAVVEAGFQFKNGAAFVRGDRYTA
                     FDFRDKHSEGWATTYQVQRARFDHVLALEAERQGVEVRYRHEVVAVDLDGDKPRVTVQ
                     GPEREKYIIEAGFVLDASGFGRVLPRLLHLETPSGFPVRGAIFTHIED"
BASE COUNT          931 a         1299 c         1438 g         1084 t
ORIGIN      
        1 gccgtgcgat cggccagacc gcaacggcaa gcgtctacag gatcgctact cggtgcgatg
       61 cgccccccac gtgatcggtg ttctagccga cgcgctgcca tggttgcggg agtccatcga
      121 aacggagctc aacagtgcca acgacaatcc tatcatcgat gcggaaggcc gaaacgtact
      181 gtatggcggt cacttttacg gcgggcatat cgcgttcgct atggacagca tgaaaaacgc
      241 cgtcgccaac ctggcggatc tgcttgaccg gcagatggcg ctgctggtcg acagccgcta
      301 caacaatggt ttgccggcca acttgtctgg agctcaaggg ccacgtgcag cgatcaatca
      361 tggtcttaag gggttacaga tcagcgcttc ggcatggact gcggaagcgc tcaagttgac
      421 catgccggct tcagtgttct ctcgttcgac cgagtgccat aatcaggaca aagtcagcat
      481 gggtactatt gcggcacgcg attctctacg cgtgatcgag ttgacggagc aagtcgccgc
      541 ggcgctgctg atcgccgtgc gacagggagt ctggctccgt tgcagactga atcgatctgt
      601 cgctccgcag gcgacattca agaacatgat ggacaccttg ggcgccgata tcgccgtgat
      661 cgaggaggac cgcaagctgg agccggatct gcgattactg ctggagcgga tccgcggccg
      721 tgcctggaaa ctgtatgaat aagtcgacca gtcgctggtc tgccgaggcc gagatacaag
      781 ttcaattctt tgatctagat cccatggaag ttgtttggca cggacactat gtccgatact
      841 tggaagttgc gcggtgcgcc ttgctcgatg cgatcgatta caactatacc cagatgaagg
      901 cctcgggtta cgcttggccc gtgatcgata tgcgcctgcg ttatatcgat gcggccacgt
      961 ttgggcaacg gctcaagcta cgcgcggaca ttgtcgagtg ggaaaaccgt ctcaagatcg
     1021 attatcttat taccgatgcc gcgagcggac gccggcttct ccgcggtagc acgacgcaag
     1081 ttgccgtcga tatgattacg cgggagatgt gctttgtatc gcccgcggtg ctatttcaaa
     1141 aattgggaat ttcaccttca tgaaatcttg gttcaaggcc tgcggcattg cgctcgccgc
     1201 ggtgccgtta gtggctgccg ccccggtggc aaaaattcaa tccatgctcg ctaagccgaa
     1261 agtgttgtgc gggcgcttcg accagagcaa acaactggtc ggcttgaaaa agccgctggc
     1321 ttcgaacggt cgcttctgcg tcgttgccga caagggggtg ctatggcgca ctttgcaacc
     1381 gttccccaat acggtgcggc tcacgcgcga tgaaatcgtc cacatgcaag aaaaccgggt
     1441 tacgatgcgg cttgacgcaa aacaagaacc cgctgtgcgg ctcatcaata gcgtattgtt
     1501 tgctttactg gctggggatc tcgatcaaat cgaaaagctg ttcgaaattg acggctacat
     1561 tcacgacaac ctctggaaag tgacgctcaa agcgcgtgaa ccggccttgg ccaaggccct
     1621 ctcgaacatc gctcttgacg gcggcgcgta tgttaagaac atcacgatca gtgagacgag
     1681 cggcgaccgc aacagcatcc tattttcgga gattcaaaca ggcgaggccg caatgactgt
     1741 cgatgaggcc gccttgtttt gagcccgcgc actctattcg cttgggtctg ggccttagtc
     1801 gtctgcttct tactgacgaa ttgtatctat ctgtggctgg gtaagcgggt cgcgcccgac
     1861 acggatattc tcgcgctgct gccggttcaa gaacgtgatc ccgtccttca agaagccttc
     1921 acccgcatga tcgattccgc tcagcagcgg ctgatcgtgc tcgtgggtac cggtgactgg
     1981 acgcaggccg cccgcgctgc cgacgcctac cttggtgttc tggcaccgca cactgccctg
     2041 ttgcaattgg atgaccgcgt tgcggatcaa acgcaacggg atgggttggc gctgtttcaa
     2101 caacatcggc tcatcttact aacgccgcga gacgaaacgg cgttgcgaag cgaacccgaa
     2161 aagcactggg tcgagatcgc tttgagcaaa ctttacagcc cctttgccgg actccacctg
     2221 ggtgcctggc gggacgatcc gtttggtttg tttggcgagt gggtccaggc gcggggtcag
     2281 gagacgccgg tgcgaccgcg cgagggtcgg ctgttcgtcg gcgacggcca gcgcccattc
     2341 gtagtcatgc cgtttacatt gcgcgttccg gcgttttcaa tagcggctca gcaggcagtc
     2401 attcccctgt tggaaaaagc gcgacaagcg gcccataaag ctgttccgca agttgaggtc
     2461 gtggcggcgg gtgtgatctt gtacgccgcc gctgccggcg tgcaggcgag ccaggaagtg
     2521 tctactatcg gattcggctc gattctcggc atcatcgtgt tgatgtgggt tacatttcgc
     2581 tccctcaagc cgatcgcatt gatcatgctg tccatcggca tcggctgcct cggcgcctta
     2641 tccgtgtgct ggttactgtt cgaacggatc catttgttga cgttggtatt cggcgccagc
     2701 cttatcggcg cggcccaaga ctatgggact tacttcttgt gcaatcgaat tgctccggac
     2761 gcacaacgat tcgattcgtg gcaattgcta cggcgcctat tgccggcgtt ggtgttgaca
     2821 ctgatcacga cagtgatcgg atatatgggc ctcgcgctaa cgccctttcc cggcttgcgg
     2881 caaatggcgg tattttccgc gctgggtttg atattcgcgt ggctgaccgt cgtcttttgg
     2941 tttcccctac gggcccgcaa cggcacgctc aagagcgcgc gaatggtaga ctggtgcgct
     3001 atcagtttgg agcgttggcc cttattgcgc ctccatcgat cgacgctttg gatggctggg
     3061 ctgttcatcg ccttcgctgc ttttggcttg tcacgactcg gtgtccagga tgatatccgt
     3121 ctattgcaga acccgccgaa acagctgatc gaagaccaga ttaagctgag caagctgctg
     3181 gatgcgccga cgccggcgca attctaccta attcgcggca ccacatctga aatcgtgctg
     3241 cagcgggaag aaatgctcaa ggagcggctc aatccactca tcgaaaagca ggtcatcagc
     3301 ggctaccaag ccctgtcaaa ctgggtgccg tcatcccggg ttcaggcagc gcgtcgcgcc
     3361 ttgatcgacc aaaagctctt gaacgaggaa gggccgctgg cggcgctggc tgcccagatc
     3421 ggcgaggacg gcaattgggt cgtcacaacg cgcacgcatt tgctcgcagc agcctcgccg
     3481 ctgactcccg gcgacttctt gaagactccg gccagtgagc cctggcgcca tctatggttg
     3541 ggccggttgg acggtggtta tggcagtatt gtcgcattgc gcggcttgac ccgcgcaagt
     3601 ttgccacttt tgcagcgtgc cgctgccggc cttgatggcg tgcagtgggt ggacaaggtc
     3661 ggtgaaattt cctcagtgct gggccgctat cggaaatata tggcctgggt ggtgttgatc
     3721 tcctacgtcg ctgtgtatgg tttgctgtac tcgcgctatc gtaaaacgac ctggcgcgtg
     3781 ctggcaccca ccgcgttggc tagcatcgcc acccttgcgc tgctcgggat agccggccag
     3841 aatctgcagc tgtttcatgt gctggcgttg atgctgctcc tcggggtcgg tgtcgattac
     3901 ggtatttttt tgcatgagca tcccagtcgg cgcgacgcca ctgcctggct cgcggtaggt
     3961 ttgtcggcat tgagtactct gctttccttc ggtttactga gtttaagcaa aacaccggca
     4021 ctgcaagcgt tcggcctcac gatgttaatc ggaacaaaca cggtgtggtt gatcgttcct
     4081 tgttttagga atgacccaat acagcaagat gagtctggaa caaaaccatg aaacgatttg
     4141 ggggtggccc tgtgatgttc gatagctggg aaaagaaagc tagaaagtct gtggaaattt
     4201 tggtcattgg cgcggggccg gccggatcgg tagcggctgc gctgctacgt cagcaaggcc
     4261 gacaggtact ggtgctcgag cgtgaacagt ttccgcgctt tagcatcggt gaaagcttgc
     4321 tgccgcaaag catggaatac ctggaacaag cgggcatgct gcgggcagtg gtagaggcag
     4381 gcttccagtt caagaacggc gccgcattcg tgcgcgggga tcggtacacg gcattcgatt
     4441 ttcgcgacaa acattcggaa ggttgggcca cgacttatca agtgcaacgg gcgcgttttg
     4501 atcatgtgct ggcgctggaa gccgagcgtc agggtgtcga ggtgcgttat cgtcacgaag
     4561 tagtcgcggt ggatctcgac ggcgataagc cgcgcgttac ggtgcaaggt ccggagcgcg
     4621 aaaaatatat catcgaagcc gggttcgtgc tcgacgccag tggctttggc cgggtgctgc
     4681 cgcgtttgct ccacttggaa acgccgtcgg gtttcccagt gcgcggcgcg atcttcacac
     4741 acatcgaaga tg
//
LOCUS       DATILV010000600         1765 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_140571, whole genome shotgun sequence.
ACCESSION   DATILV010000600 DATILV010000000
VERSION     DATILV010000600.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1765)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1765)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1765
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140571"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(163..819)
                     /locus_tag="VLJ17_13950"
     CDS             complement(163..819)
                     /locus_tag="VLJ17_13950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009337938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HSV24117.1"
                     /translation="MASSGFAQEGDVALGARAFRACAACHSVEANRNMTGPSLADIWN
                     RKAGSLSSFSRYSDAMKSSDVIWNEKTLDGYLENPAQFMPGNHMTFPGVPDEKTRTSI
                     IAFLKEAGAKSGDQQSAQAPMGGMSGMQRPAPNLKTAADSSRIKSISYCHDTFKVTTF
                     DGKTRDFWERNLRFKTDSSEEGPEKDTPAIVNAGMMGDRASIIFSSPEEISRFIVRGC
                     "
     gene            complement(878..1189)
                     /locus_tag="VLJ17_13955"
     CDS             complement(878..1189)
                     /locus_tag="VLJ17_13955"
                     /inference="COORDINATES: protein motif:HMM:NF016130.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF411 domain-containing protein"
                     /protein_id="HSV24118.1"
                     /translation="MNEFQTKTIETSEINRVRARLGVPFELAACHTAEVSGYLIEGHV
                     PAKAIQRLLTERPKARGLAVPGMPSGSPGKTGEYEEYDVILFGPTERRVYARFKGETQ
                     I"
     gene            complement(1428..>1765)
                     /locus_tag="VLJ17_13960"
     CDS             complement(1428..>1765)
                     /locus_tag="VLJ17_13960"
                     /inference="COORDINATES: protein motif:HMM:NF021070.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2390 domain-containing protein"
                     /protein_id="HSV24119.1"
                     /translation="GIVLTREHLEGASRSISSWHDHVVRPLRGVRRQMKLHHEDASAL
                     RAQVQRVEIEAEQVEQAMLFDYARSITPAGERDAVAHNVSEYLAVMSGAASDLGAPLL
                     VAAARNQKP"
BASE COUNT          375 a          510 c          490 g          390 t
ORIGIN      
        1 ttgggtggga gtcccgacga ttttacccgc tatataaaaa gcgagtcgga gcggtgggcg
       61 cggatcttgc gcgatatgga tgccgcgaaa gccgacaaga cgccggcacc gcaggcgcag
      121 tgagcctggg tcgcgcggcg cggaaaagcg gacatcgagc cgtcaacatc cccgaacaat
      181 gaaacggctg atttcctccg gtgacgagaa aataatagat gcgcggtcgc ccatcattcc
      241 ggcgttgacg attgcaggag tgtccttttc tggaccttct tcacttgagt ctgtcttgaa
      301 acggagattg cgttcccaga agtcgcgagt tttcccatcg aatgtcgtca ccttaaaggt
      361 gtcatgacaa tacgaaatgg atttgatgcg gctagagtct gcggcagtct ttaggttggg
      421 agcgggacgc tgcatgccgg acatcccacc cattggcgct tgagcgcttt gttgatcgcc
      481 cgatttcgca cctgcctcct tgagaaaagc gatgatgctc gtgcgggtct tttcgtccgg
      541 cacgcccgga aatgtcatat gattgccagg cataaactgc gctggatttt cgagatatcc
      601 gtccagcgtc ttttcgttcc agatcacgtc ggatgacttc atcgcgtcgg aatagcgcga
      661 aaaactcgac aagcttccgg ccttgcgatt ccaaatatcc gcgaggctcg ggccggtcat
      721 gtttcggttg gcttcgaccg aatgacacgc cgcacaggca cggaaagccc gtgcacccag
      781 agcgacatcg ccttcctgtg cgaagccgga cgacgccaac agacagaaaa atagcgtggc
      841 ggcgggacac gcatacctca tagcgaactc ctatagccta gatttgcgtc tcgcccttaa
      901 accgagcgta gacgcgacgt tcggtcggtc cgaacaagat cacatcatat tcttcgtact
      961 ccccggtctt gccgggcgaa ccactcggca taccgggcac ggcaagaccg cgtgccttgg
     1021 gccgctcggt aagtagcctt tggatcgctt ttgccggaac gtggccctcg atcagatacc
     1081 cgctaacctc cgcggtgtga caggccgcta gttcaaacgg aacgccaagc cgtgccctga
     1141 cgcgattgat ttctgacgtt tcaattgtct tggtttggaa ttcattcaat tcgagatgcg
     1201 cgatccatcc tccgcaacat ccgcaagtcg gatctttgtg aaccgtaatt agtggccacg
     1261 cggcccatgt tttggacggc aaaagcgcca ccgccgcaaa agaaaggcat gcgaagcgtc
     1321 ttgtaaggtg aagtccttgg atcatttttg gaccctcaat tagatcagga actcaaacgc
     1381 tcggggttct tgtttgcaag tcaaatgggc gtgtctccat gtccgctcta gggcttttga
     1441 ttccttgccg cagcgacaag cagcggcgca cccaggtctg atgccgcacc ggacatcacc
     1501 gcgagatatt cgctgacgtt gtgggccacg gcatctcgct cgccggcagg cgtaatgctc
     1561 cgtgcatagt cgaacagcat tgcctgttcg acctgctcgg cttcgatctc gacacgctgg
     1621 acctgcgccc tcagcgccga cgcatcctca tgatgcaatt tcatttgccg gcgcacgcca
     1681 cgcaacggac gaacgacgtg gtcatgccag gacgaaatac tgcgcgatgc cccttcgagg
     1741 tgctctcgcg taaggactat tccgc
//
LOCUS       DATILV010000601        10725 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4997731, whole genome shotgun sequence.
ACCESSION   DATILV010000601 DATILV010000000
VERSION     DATILV010000601.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10725
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4997731"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(68..328)
                     /locus_tag="VLJ17_13965"
     CDS             complement(68..328)
                     /locus_tag="VLJ17_13965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24120.1"
                     /translation="MKSGHLLFVVSLLISSHATRAEEFRTRPITLTVPLAPGGSVDID
                     IVSAAAELRESTRSSVSRTQPRIPNPHSPWWTSYAASGGGNP"
     gene            complement(731..1645)
                     /locus_tag="VLJ17_13970"
     CDS             complement(731..1645)
                     /locus_tag="VLJ17_13970"
                     /inference="COORDINATES: protein motif:HMM:NF020419.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyl transferase AbiEii/AbiGii toxin
                     family protein"
                     /protein_id="HSV24121.1"
                     /translation="MNSKAASIKSAIADFMVRHAIPGEMEQNLIKETIHLHLLSALSD
                     TGVLRHVVFQGGTALRLCYGGERYSEDLDFVCGKAGSYVDKIDFDRLVVDALETTKKS
                     LHRDFDVDPDQIALKQPSHPMAIKSDSVSVTAWQIVVPIGTTPHSPKSRIKIEFANVP
                     SYDNGPNVANVTQGLVRIQDVILTAESVNEILADKAVALTAREVLKYRDVWDVWYLVN
                     RLNAQADRDIVTRKFTDYGTSDVEAKAEQRRQDLAKRSTAKLFLDEMRRFLPAKRVAE
                     ISDTGLQQTILAASGELIKRAVLPMAPS"
     gene            complement(1626..2180)
                     /locus_tag="VLJ17_13975"
     CDS             complement(1626..2180)
                     /locus_tag="VLJ17_13975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24122.1"
                     /translation="MLMQKLDEIDRRGVWAFTPATFSALLRDPEQNYLKLMMKRLADQ
                     GVLIRAARGVYVNPRARSMPQDVRGGLIRFLRPREVTYVSLESKLSEAGVISQVTTAL
                     TCMTTGSPGRFDTPWGAIEFTHTDRPIALGTDVHARDDGVLEATVERSARDLRRVGRN
                     IDLIDEETLAEAIREERSHEQQGR"
     gene            2467..2685
                     /locus_tag="VLJ17_13980"
     CDS             2467..2685
                     /locus_tag="VLJ17_13980"
                     /inference="COORDINATES: protein motif:HMM:NF039803.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6516 family protein"
                     /protein_id="HSV24123.1"
                     /translation="MDYSLTLHGREGQRLVGFDTAHPVRRQRRGEPQDHRHRLRNVKP
                     YEYRDAASLLADFWEAVDAVLRERGMIP"
     gene            2682..3044
                     /locus_tag="VLJ17_13985"
     CDS             2682..3044
                     /locus_tag="VLJ17_13985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020011478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSV24124.1"
                     /translation="MTTLKVGIASYEEMKTRTMAVARGERRVAANEPKVWFTSTESFA
                     KVLSAGNRELLRVIAEKAPGSLDELARITGKAKSNLSRTLRTMEGYGLVRLERGERGR
                     ITPKVVHDRVELDLPLTL"
     gene            3088..3408
                     /locus_tag="VLJ17_13990"
     CDS             3088..3408
                     /locus_tag="VLJ17_13990"
                     /inference="COORDINATES: protein motif:HMM:NF024800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HSV24125.1"
                     /translation="MSCPTLFTGICFCAYCDCAMTPRTGRKGRIATTPARSKRGRARP
                     AVRPFDPDGQDNLIADHIADRLVQPEQLEEVLTSVLDRRQEHAERRRVGAAYARQSGR
                     CGVP"
     gene            3822..5078
                     /locus_tag="VLJ17_13995"
     CDS             3822..5078
                     /locus_tag="VLJ17_13995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24126.1"
                     /translation="MAGLLVALALTLPSAAVAAQPKGKQFEPPKLTHPMQVVIVADDR
                     DGCEPNCAEWVSAEGEIAPDTPAQFRRVFKTLGHKKLPIFISSSGGAAEAALAIGREI
                     RKRGLDVAVERTIFQKCEPSPSTCDRRTLKDGDKGRPEAIGAYCASACVFILAAGVER
                     VVPVYGFVGVHQLIQFQTYHRVWRTYRVQRRFENGRPVEVSRELISEKPLSSTVVEKD
                     PNYAPVRAYLDEMGVDTAAIMPLIMATPHTDVHRMTPEERRTTRLVTRVTTGAELLAA
                     ATQPSATGGAASKPLPVALQAVVAPSQVFADLTLFYPPVGHALDIYVRLRSSDPQFRT
                     DGFSADVEFPGGKTLIARSTGSRPVDPLYATLTSDEFCAVRRSGDLSVKLILNGTANW
                     GLPQRFAFDPAKSPGFAEFAAKHCSK"
     gene            5390..8266
                     /locus_tag="VLJ17_14000"
     CDS             5390..8266
                     /locus_tag="VLJ17_14000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008967412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24127.1"
                     /translation="MSRVQRSSVSAKRTHALAAFAFYVLMAITFFAYPAGAGSPADFI
                     AFETGQVRPLAMSPDRHTLFAVNTPNGTLEVFRIETGRLEHTAQIPVGMEPVAVAARS
                     DNEVWVVNHLSDSISIVSLAGTPHVVRTLLTGDEPRDIVFAGRNGRAFITTAHRGQQR
                     TDRSIAHVPGAGDPQLTTPGIPRADVWVFDPENLGTAVGGTPVAILSFFTDTPRALAV
                     SPDGRTVYVAGFQTGNQTTTIDAFRICNGFSASQPCLLPDGSVSPGGNLGPATDASGE
                     PAPKVAEIVKFNNATGHWQDELGRIWDSSVRFSLPDADVFAVDADTLTQTAAFAHVGT
                     TLFNMATNPTNGHLYVSNADSQNQVRFEDPKRLAGHTVTGHLAEMRITVISGATVTPI
                     HLNKHLDYGRLPGDPGFDPTQQQHSLATPLGMAVSGDGRKLYVAAFGSSKIGVFDTTS
                     LEGNSFDPTVASAKYIHLSGGGPSGVVLDEPRNQLYVLTRFDDAVKVVDLGSRREVGA
                     VPMQNPEPPSVIEGRPMLYDARRFGSNGEAACASCHTFADKDELAWDLGNPGGTVTAN
                     PIPILNPQPPAVLAALIPVFGPINGIGQLNVFHPMKGPMTTQTLRGLSHSGAMHWRGD
                     RANGFFGADPSNESLSFDNFIVAFQSLLGTAARPTAAEMQAFTDFALQIQLPPNPVRN
                     LDNSLTPAQQRGAAFFAGPRPSDGIRNCNGCHTLDPAQGQFGTGTNATFELLPQVFKV
                     PHLRNMYTKVGMFGMPATNLFNNRDTGNLGPQIRGFGFTNDGSVDTMFTFFNGAPFNP
                     TPNAGFPQINPDGTRQDVEQYLLAFDSDLAPIVGQQITLAKDSATGAGDRLSLLEQRA
                     GTPFASLILGGTVTECDLVANMVVKERIEGLLFNPATASFAAADGTAVSDSALRAFAM
                     KRGREVTFTCVPPGSGARVAFRQLRVGSPDERPTMREHRAEQGF"
     gene            8343..8939
                     /locus_tag="VLJ17_14005"
     CDS             8343..8939
                     /locus_tag="VLJ17_14005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2975 domain-containing protein"
                     /protein_id="HSV24128.1"
                     /translation="MTAIAPPDTISPIRSPQAALRARIGWLCHLIRLGAVGWPAWNLG
                     LLFWQWHWRDLAKITENLGRALNADLHGLSYSQIDLAFVLVLCQVAFQAAVSYCIWRL
                     FGSFLQGRIFTVDAAIWMRRIGITELVAVLVSLVLRRVTVFILTSHAHLPATTVLSFG
                     QPVVPLDLIQVMFCFFVIGLAQIFKTAAEMADDHARIV"
     gene            8950..9546
                     /locus_tag="VLJ17_14010"
     CDS             8950..9546
                     /locus_tag="VLJ17_14010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2975 domain-containing protein"
                     /protein_id="HSV24129.1"
                     /translation="MSTTSPVIVLYPVPASQSALRARIGWMCHLMRMTAVLWSGWVLV
                     AIVLNWYHSNPALMMENLGRALNADLSEFSNAQVTWYFVVWLSLWPFNAAVAYSIWRL
                     YGTFLQGRIFTVDAAIWMRRMGTTGLLAVLIGIVWGRIALFILTCHAHVPAATILLFS
                     QPVSPAHLMLALFCFVVIALGHIFKTAAEIAADHARIV"
     gene            complement(9582..9833)
                     /locus_tag="VLJ17_14015"
     CDS             complement(9582..9833)
                     /locus_tag="VLJ17_14015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016917999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSV24130.1"
                     /translation="MIIVNLDVMLARRKMRSKELSERIGITEQNISLLKSGKVRGVRF
                     DTLAKICEALDCQPGDLLEYRPDDEEGARRFRLRRSTAA"
     gene            complement(9837..10418)
                     /locus_tag="VLJ17_14020"
     CDS             complement(9837..10418)
                     /locus_tag="VLJ17_14020"
                     /inference="COORDINATES: protein motif:HMM:NF022636.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2975 domain-containing protein"
                     /protein_id="HSV24131.1"
                     /translation="MPPIRMITPVPGMTAVRGQQPGTGLRRLTVAAEGLALFGIAFGT
                     AFVLHVWSDPERVASLMKASLHGMPVAIDNSAWIMTGVLAIISLIFFGWAMWEARALF
                     RTLGKGDFFASDLPRRLTRLGYLGLAGSLGGIVVRTLMAFISTVHVAPGPQLSIAITS
                     ADYVCVIAALQLIVFARVMHEARRIADENQGFI"
     gene            complement(10473..>10725)
                     /locus_tag="VLJ17_14025"
     CDS             complement(10473..>10725)
                     /locus_tag="VLJ17_14025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24132.1"
                     /translation="AVLVGLSRGHWRIDWPIGRWRPHRRELRGTSLPSDLDHDCLRRF
                     GRGSLFLLMRVNGMIEASGTCVRAASAVGRISTITVRLI"
BASE COUNT         2062 a         3342 c         3192 g         2129 t
ORIGIN      
        1 cgaactaccg cggtgatcac aacggcctag caggatctga agcactgcag gctgaacttg
       61 ttcggggtca cggattgcca ccgccggacg ccgcatagga ggtccaccat gggctatgcg
      121 gattcgggat gcggggctga gtccgcgata cagacgagcg cgtcgattca cgaagttctg
      181 ctgcggcgct cacaatgtcg atgtcgaccg agccgccagg cgcgagcggg accgtcagcg
      241 tgatcggtcg cgtccggaat tcttcggccc tggtggcgtg actggagatg agaaggctaa
      301 cgacgaaaag gaggtggcca gatttcacgg ctgccctcca cgcaacggct aagaagatta
      361 ccgcgagttg gtgattgtga acctattggt ggtcacgccg gcaacttcgg tgacgcgcag
      421 ccgcgaggct cgccgtacag cacccccgcg aagaatttta tccgtttatc cagacgtgaa
      481 atctgcaggc gccgcatatg cgcgacaggg tcggcgctgc ggcgtaccgt gacgagtcga
      541 catcctgctc gatgcaaaaa tgatcattta caaagtcact ggggctggta ttttctgccg
      601 caaccgatga gttcgatcca ggcggatgca acccaattat cagcctcggt cattgcgata
      661 tattagcaag ccctgcgcgc gtatccgcta atcgagccga tcggctcgcg atcaaccgcg
      721 gccgcttggc ctaacttggc gccattggaa gaaccgcgcg cttgatcagt tcgccgctag
      781 cagcaaggat cgtctgctgc aaaccggtgt cgctgatttc cgcaacgcgc tttgccggca
      841 ggaaccttct catctcgtca agaaacaact ttgcagtaga cctcttcgcc aagtcttggc
      901 gccgttgctc ggcctttgct tcgacatccg atgtgccgta gtcggtaaat ttccgggtga
      961 ctatatctcg gtcggcctga gcgttcagcc tgttgacgag ataccaaaca tcccagacgt
     1021 ctcggtattt caagacttcc ctcgccgtca gcgcgacggc cttgtcagca aggatttcgt
     1081 tgacgctttc ggcggtgagt ataacgtcct gtattcggac caatccctgc gtcacgttag
     1141 cgacattagg cccgttatcg taggacggca catttgcgaa ctcgatcttg atgcgggact
     1201 tcggtgaatg cggtgttgta ccgattggca cgacgatctg ccacgcagtc acggatacgg
     1261 aatcgctctt tatcgccatg ggatgagagg gctgcttgag ggcgatctga tccggatcga
     1321 cgtcgaaatc gcgatgtaat gacttctttg tggtctctag cgcgtctaca acgagccggt
     1381 cgaaatcgat cttatcgacg taggatcctg cctttccgca cacgaagtcc aagtcttcgc
     1441 tgtagcgttc gccgccgtag caaagacgca atgcggtccc gccctgaaac acgacatggc
     1501 gaagcacgcc tgtatcggag agtgcagaca gcagatgaag atgaatcgtc tccttgatta
     1561 gattttgctc catctcgccg gggatggcat gccttaccat gaagtcggcg atggcactct
     1621 tgatgctagc ggccttgctg ttcatgactt ctctcttcgc gaatcgcctc ggccagagtt
     1681 tcctcgtcga tcaaatctat atttcttccg acacgccgga gatcgcgggc cgatcgttcc
     1741 actgtagctt caagcacgcc gtcatctctc gcatgcacgt cggttccgag cgcgatgggg
     1801 cgatccgtgt gggtgaactc gatcgctccc catggagtat cgaaacgacc aggagagccc
     1861 gtggtcatgc aggtcaaggc ggtcgtgacc tgcgagatca ctccggcctc ggacaactta
     1921 gactcgaggc tcacatacgt gacttccctg gggcgtaaga atcgaatgag tccgcctcgc
     1981 acgtcttgtg gcatagagcg ggcacgcgga tttacgtaca ccccgcgtgc agccctaatt
     2041 agtacgccct ggtcggccaa gcgcttcatc atgagtttga gataattttg ttcagggtcg
     2101 cgaagcaggg ctgagaatgt cgccggcgtg aaggcccata ccccacgtcg atcgatctca
     2161 tccagctttt gcatcaacat agcgcgcctc atatgtcata ttgtagttat caaaaacgat
     2221 aacttcaaga tgacttatat cggcatagcc tatcgagacg aacatcttgc tctatcctac
     2281 ggccgccaaa gccctcctta tgttgcttca gtgtgataac tatatgccgt gacgaagccg
     2341 cgtgacccga ccctcgatgt gcttctcgac ctcgacgggc aagttctcgt ggcggacccg
     2401 gagggcggcc gctgggtccg gttggtggtg acgcgggtgc cggcgtagcc agagaagccg
     2461 cacggcatcg actactcgct gacgctgcac gggcgtgagg gccagcgact tgtcgggttc
     2521 gacaccgcgc atcccgtcag gcggcaaagg cgtggcgaac cgcaggatca tcgccaccgg
     2581 ctgcgcaacg tcaagcccta cgagtaccgg gacgcagcga gcttgcttgc cgacttctgg
     2641 gaggccgtgg acgcggtatt gcgcgagaga ggaatgatcc catgacgacg ctgaaggttg
     2701 gcatcgccag ctatgaagag atgaagacgc ggaccatggc cgtggcgcgc ggcgagcgtc
     2761 gtgtcgcggc caacgaaccg aaggtctggt tcacttcgac cgagtcattt gccaaggtcc
     2821 tgtctgcggg caaccgcgag ctgctgcgcg tgatcgccga gaaggcgccc ggctcactcg
     2881 acgagctggc acggatcacc ggcaaggcca agtccaatct gtctcgaaca ttgaggacga
     2941 tggaaggcta tggcctggtc cgcctcgaac gcggcgagcg tggtcgcatc acgccgaagg
     3001 tggtgcacga ccgcgtggaa ctggaccttc cgctcaccct ctagcggaaa gcaagttgag
     3061 tcatgaccgc ttgggcgtcg gcgcgtcgtg agctgtccga ccctctttac cggcatctgc
     3121 ttctgcgcct actgcgactg cgccatgacg cccagaaccg gaaggaaagg ccgcattgct
     3181 actacgcccg ctcgatcaaa gcgcggcagg gcgagaccgg ctgtaaggcc gttcgatccc
     3241 gatggacaag acaatctgat cgctgaccac attgccgatc ggctggtaca gccggagcag
     3301 ctcgaggagg tcctgacatc ggttctcgac cgccggcaag agcacgccga gcgccgccgc
     3361 gtaggcgccg catatgcgcg acagagtggg cgctgcggcg tgccgtgacg ggtcggcgtt
     3421 ctactcgagg gtggaaatga tcatttacaa agtcgctggg cctggtattt tctgccgcaa
     3481 ccgatgagtt cgatccaggc ggatgcaacc caattatcag cctcggtcat tgcgatatct
     3541 tagcaagccc tgcgcgcgta tccgctaatc gagccgatcg gctcgcgatc aaccgcggcc
     3601 gctgcagctc ggagccgatg tggttctccg cgagcatcga cgtcacggag ggaggggcct
     3661 gaatgtgcgc acgacccgga gcgtgcttcg ctcgcgttgc cctcaacgat gcacgtgata
     3721 cgtccacaat gagcttgagt ggggcgcaaa ttcctgactg cgcagcggct gcgccgggca
     3781 ccgggctcga gtggcttcgc tcctgtggga ttggcgcccg catggcggga ttactcgtcg
     3841 cattggcatt gacgcttccc agtgcggctg tcgcggcaca gccgaaggga aaacaattcg
     3901 agccgccgaa gctgacccat ccgatgcagg tcgtcatcgt cgccgacgat cgggacggct
     3961 gcgagcccaa ctgcgccgag tgggtttcgg ccgaaggcga gatagcgccg gacactcccg
     4021 cgcagttccg tcgcgttttc aagacgctcg gtcacaagaa actgccgatc ttcatttcct
     4081 cctcgggcgg agcggcggaa gccgcactcg ccatcggccg cgaaatccgc aagcgcgggc
     4141 tcgatgttgc ggtggagcgg accatcttcc agaaatgcga gccgagccct tccacctgtg
     4201 atcggcgtac gctcaaagat ggggacaagg gccggccgga ggcgatcggc gcctattgcg
     4261 cctcggcttg cgtcttcatc ctggctgccg gcgttgagcg cgtcgtcccg gtctacggct
     4321 ttgttggagt gcaccagctc atccagttcc aaacctacca tcgcgtgtgg cgcacttacc
     4381 gcgttcagcg gcgcttcgag aatggacggc ccgtcgaagt ttcacgcgag ctcatctcgg
     4441 aaaagccgct gtcctcgacc gtcgtggaaa aggaccccaa ttatgcaccg gtgcgggcct
     4501 atttggacga gatgggggtc gatacggcgg cgatcatgcc gctcatcatg gcaacgccgc
     4561 acacggacgt tcatcggatg acgccggagg aacggcggac gacgcggctg gtgacgcgag
     4621 tgacaactgg cgccgagcta ctggcggccg cgacccagcc atcggccacg gggggcgccg
     4681 ccagcaagcc actccccgtg gcactgcaag cagttgtcgc cccctcccaa gttttcgccg
     4741 acctcacgct cttctatccg ccggtaggac acgcgctgga catttacgtt cgcttgaggt
     4801 cgtcggaccc gcagttccgc acggacggat tctctgcaga tgttgagttc ccgggcggaa
     4861 aaacactgat agcccgtagt acgggcagca ggccggtaga tccgctttat gccacactca
     4921 ccagtgacga attctgtgct gtccggcgct ccggggattt gtctgtcaag ctcatcctca
     4981 atggcaccgc gaattggggc ctcccgcaac gcttcgcatt tgatcccgcc aagagcccgg
     5041 gttttgccga attcgccgca aagcactgca gcaagtgagt ggcccataca cgcgcacggt
     5101 cgcgtcgcga agccacaatt gtgagggcga cggatcgccg caatgacgct gttctgctgc
     5161 cgcgatttgc tcgcaaagta aaaataaata aaatcttgac atgaatatat tattgtcata
     5221 cgttaatttt aattgatcca acacgatacc gctctgccac ccaggccgcg ccgacgcaac
     5281 agcgtcggag acggctcgag tgctgtctca tgcttgttac gcgcggttgg caattaaccc
     5341 gtgaatgaag tgcaccgttc cgcgcacggc gccaatagga ggccttgcta tgtctcgcgt
     5401 gcaacgctcc tcggtctcag cgaagcgaac tcatgctttg gcggcatttg cattttacgt
     5461 tctgatggcg attacgttct tcgcgtatcc cgccggcgct ggctctccgg ccgatttcat
     5521 cgcttttgaa accgggcagg tgcgaccgct tgcgatgtcg cccgaccggc acacgctgtt
     5581 cgcggtcaat acaccaaacg gcactctcga agtcttcaga atcgaaactg ggaggctgga
     5641 gcacacggcg caaattccgg tcggcatgga accggtcgcc gtcgccgccc gcagcgacaa
     5701 cgaagtgtgg gtcgtcaacc acctctccga cagcatcagc atcgtctcgc tcgccggcac
     5761 gccgcacgtc gtgcgtactt tgctcaccgg cgatgagccg cgcgatatcg tctttgccgg
     5821 aaggaatggc cgcgctttca tcaccaccgc tcatcgcggc cagcagcgga ccgatcgctc
     5881 gatcgcccat gtacccgggg caggcgatcc gcagctgacc acgccaggca ttccgcgcgc
     5941 cgacgtatgg gtattcgatc ccgaaaatct gggcacggct gtgggtggca cgccggtagc
     6001 aatcctgagc tttttcactg acacgccgcg tgcgctggcc gtcagccctg atggacggac
     6061 cgtctatgtc gcgggtttcc agaccggcaa tcagaccacc acaatcgatg cattccgcat
     6121 ctgcaacgga tttagcgcca gccagccttg cctgctgcct gacggctcgg tgagccccgg
     6181 cggcaatctc gggccagcca cggacgcgtc gggcgaaccg gcgcccaagg tcgccgagat
     6241 cgtcaagttc aacaacgcga ccgggcattg gcaggacgag ctcggccgca tctgggattc
     6301 ctcggtgcgc ttcagcctgc cggatgcgga cgtgttcgcc gtcgatgccg acacgctgac
     6361 gcaaaccgcc gcgttcgccc atgtgggtac cacgttgttc aacatggcga ccaatccgac
     6421 gaacgggcat ctctacgttt cgaatgccga ctcccaaaac caggtgcggt tcgaagaccc
     6481 caaacgcttg gccggacaca ccgtgaccgg ccatctcgcc gagatgcgca tcaccgtcat
     6541 atccggcgcg acggttacgc ccattcacct caataagcat ctcgattacg gccgcctgcc
     6601 gggcgatccg ggctttgacc cgacccagca gcaacacagc ctggcgacac ccctcggcat
     6661 ggcggtctcg ggcgacgggc ggaagctcta cgtcgccgcc ttcggatcaa gcaagatcgg
     6721 ggtgttcgac accacctcgc tcgagggcaa cagcttcgac ccgacggtcg cgagcgcgaa
     6781 atacatacac ctgagtggcg gcggcccaag cggtgtcgtt ctggatgagc cgcggaacca
     6841 gctatacgtg ctcacccgtt tcgacgacgc cgtcaaagtc gtcgaccttg gatcgcgccg
     6901 cgaggtcggg gcggtgccca tgcaaaatcc cgaaccgcct tcagtgatcg agggccgtcc
     6961 gatgctctac gatgcccggc ggttcggtag caacggcgag gcggcttgcg cgagctgcca
     7021 taccttcgcc gacaaggacg aactcgcctg ggacctcggc aatcccggcg gtactgtcac
     7081 ggccaacccg ataccgatcc tcaaccccca gccgccggcc gtgctcgccg cgctcatccc
     7141 ggttttcggg ccaatcaacg gcatcggcca gctcaacgtt ttccacccga tgaagggacc
     7201 gatgaccacg cagacgctgc gcggcctcag ccattcgggc gcgatgcact ggcgcggcga
     7261 ccgcgccaac gggttctttg gcgccgatcc gagcaatgag agcctgtcct tcgacaactt
     7321 catcgtcgca tttcagagcc ttctgggtac cgccgcccgg ccaacggcgg ccgagatgca
     7381 ggccttcacg gatttcgcgc tgcagatcca gctgccgcct aatccggtgc gcaatctcga
     7441 taattccttg acgccggcgc agcagcgcgg tgccgccttc ttcgctggtc cgcgtccgtc
     7501 cgacggtatc cgcaactgca acggttgtca cacgctagat ccggcccagg gccagttcgg
     7561 cacgggcacg aatgcgacct tcgagctcct tccgcaggtg ttcaaggtcc cgcacctgcg
     7621 caacatgtac accaaggtcg gcatgttcgg catgccagca acgaacctct tcaataatcg
     7681 ggacaccggc aaccttggcc cacaaatccg cggctttggc ttcaccaacg acggctcggt
     7741 tgacacgatg ttcacgtttt tcaacggcgc gccgttcaat ccgacgccga atgccggctt
     7801 tccacaaatc aatccggatg gcacccggca ggatgtcgag cagtatctgc tggcattcga
     7861 cagcgatctt gccccgatcg tcggacaaca gatcacgctt gccaaagaca gcgcgaccgg
     7921 tgccggcgac cgcctcagcc tgctggaaca gcgcgccggc actccgttcg cctcgctgat
     7981 attgggcggc acggtcaccg aatgcgacct cgtggcaaac atggtcgtaa aggaacggat
     8041 tgagggcctt ttgttcaacc ccgccaccgc aagcttcgcg gctgccgacg gaactgccgt
     8101 gtcggacagc gcactgcgcg cattcgccat gaaacgcggc cgtgaggtaa ccttcacctg
     8161 cgtgcctccg ggatctggcg ctcgcgtcgc cttccgtcaa ttgcgtgttg ggagtccgga
     8221 cgagcggccc acaatgcgcg agcaccgtgc cgagcagggt ttctgagaag gaattgagaa
     8281 aaaaccgcaa tcaatggtca cccacgtgct ttggccgggc gcatgtttgt aagaggtcga
     8341 tcatgaccgc aattgcaccg cctgacacga taagcccgat ccgttcccct caagccgcgc
     8401 ttcgcgcccg catcggatgg ttgtgccatc tgatccggct cggcgccgtg ggttggcccg
     8461 cgtggaacct ggggctcttg ttttggcagt ggcactggcg cgaccttgcc aagattacgg
     8521 aaaacctcgg ccgcgctttg aacgcggatt tacacgggct ttcgtactca caaatcgatt
     8581 tggcgttcgt cctggtcctt tgtcaggtgg ccttccaggc cgccgtcagc tattgcatct
     8641 ggcggctgtt cggaagcttc ctccagggcc gcatcttcac ggtggacgcg gcgatctgga
     8701 tgcgccgtat cggcatcaca gaactcgtcg cggtcctggt cagtctggtg ttgcgacggg
     8761 tgaccgtctt catcctgaca agccacgcgc acctaccggc cacaaccgtg ttgtcgtttg
     8821 gtcaaccggt ggtcccgctt gatcttatcc aggtcatgtt ctgctttttt gtcatcggtc
     8881 ttgcgcagat cttcaagaca gcggcggaaa tggccgacga ccacgcgcgg atcgtgtgag
     8941 gcttccgcca tgagtacgac gtcgccagtt atagtgcttt atcccgttcc ggcctctcaa
     9001 tcggcgctgc gtgcccgcat cgggtggatg tgtcatttga tgcggatgac agccgtgctg
     9061 tggtccgggt gggttctcgt ggcgatcgtt ctgaactggt atcacagcaa ccccgccctg
     9121 atgatggaga acctcggccg cgctctaaac gccgatctga gcgagttttc aaacgctcag
     9181 gtgacttggt atttcgtcgt ttggctctcc ctctggccct tcaatgcggc ggtcgcctat
     9241 tccatctggc ggctgtacgg aaccttcctc caggggcgca tctttaccgt ggacgccgcg
     9301 atctggatgc ggcgtatggg cacgacggga ctcctcgccg tgctgattgg gatcgtgtgg
     9361 gggcgcattg ccttgttcat cctgacctgt catgcgcatg tgccggcggc taccatattg
     9421 ctgttttctc aaccggtgag cccggctcat ctgatgctgg cgctgttctg ctttgttgtg
     9481 attgcgctcg gccacatctt caagacggcg gccgagatcg cggctgacca cgcccggatc
     9541 gtgtaatcga ggacgcgatt tgatccgccg agccgctttg ctcaggcggc tgtcgatctg
     9601 cggaggcgaa agcgccgcgc gccttcctca tcgtccggcc gatattccag caagtcgccg
     9661 ggctgacaat cgagcgcttc gcagatcttt gccaacgtat cgaagcgcac gccgcgtacc
     9721 tttccggatt tcagcagcga gatgttctgc tcggtgatgc cgatccgctc ggaaagctcc
     9781 ttcgatcgca tcttgcgtcg ggcgagcatg acgtcgaggt tgacgatgat catggcttag
     9841 ataaagccct ggttctcgtc ggcaatgcgc cgagcctcgt gcataacgcg ggcgaagacg
     9901 atcagttgca gagcggcgat gacgcagaca tagtcggccg acgtgatcgc gattgaaagt
     9961 tgcgggccgg gcgcgacgtg gaccgttgaa ataaacgcca tcagggtgcg caccacaatg
    10021 ccaccgagcg agcccgcgag ccccagatag ccgagacggg tcaggcgccg cggcaggtca
    10081 ctggcaaaga agtcgccctt gccgagcgtg cgaaataatg cgcgcgcctc ccacatcgcc
    10141 caaccgaaga agatcaatga gatgattgca aggacgcctg tcatgatcca ggcgctgttg
    10201 tcaattgcca ccggcatgcc gtgcaggctc gccttcatca acgacgcgac acgctccgga
    10261 tcgctccaga catggaggac aaaagccgtt ccaaacgcga tgccgaacag cgccaggcct
    10321 tcggccgcga cagtcaggcg gcgtaggccg gtgcccggct gctggcctcg aaccgccgtc
    10381 atgccgggta ccggcgtaat catccgaatc gggggcaccg ccttctcctc tggctgaatg
    10441 taaaacgata aataatatgt gtcaaatgtg atctagatca agcgcaccgt gatcgtgctg
    10501 attctaccca cggcgctggc cgcccgcacg cacgtgccgc tggcctcgat catgccgttg
    10561 acccgcatca acaaaaaaag actgccgcga ccaaaacggc ggaggcaatc atggtccaga
    10621 tcggatggta gcgacgtccc gcgaagctct cgacgatgcg ggcgccaacg gccgatgggc
    10681 caatcaatgc gccaatggcc acggctgagg ccgaccagca ccgca
//
LOCUS       DATILV010000602         3836 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1164813, whole genome shotgun sequence.
ACCESSION   DATILV010000602 DATILV010000000
VERSION     DATILV010000602.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3836)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3836)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3836
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1164813"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..331)
                     /locus_tag="VLJ17_14030"
     CDS             complement(<1..331)
                     /locus_tag="VLJ17_14030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp70 family protein"
                     /protein_id="HSV24133.1"
                     /translation="MGKVIGIDLGTTNSCVAVMEGKTSKVIENSEGRNTTPSIVAFTD
                     DGERLVGQPAKRQAVTNPERTFFAVKRLIGRRYDDPMVEKDKKLVPYKIMRASNGDAW
                     VEADGKSY"
     gene            complement(579..2309)
                     /locus_tag="VLJ17_14035"
     CDS             complement(579..2309)
                     /locus_tag="VLJ17_14035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24134.1"
                     /translation="MLGLAWLVVVAQLLAEHWPETAQTLSDMDDAMRLVQVREFLAGR
                     GWFDLHEMRLGPPDGYDTHWSRLIDAGIAGMLLVFNQFTDAAFAERLVRTIWPMLWLI
                     PAMASAAAIAWRIGGRAAAPLAFLLAAVGLPAFQHFIPGRIDHHNVQIALSMLLVAAT
                     VWSDRVQWAAAVAGALTGFAVAIGFEGVPYVVLAGAALALRFVRDPNGARPLARYGLW
                     AAASVATAFLVSIGPARWGSTACDAIAINSAAGVTTATLGLAISATAFAAWSWRARAT
                     AVVVSGVAAAAVFLAIEPQCFFGPFATMDPTVRTIWFNHVSEMRSLWTLAMTSPPMAA
                     AVAAFPIVAVLGTLALARDPSIRRDFGFVVAAVALLIACIVMMVMVRAYSYAIWLAIP
                     LVAVGALRLFDVMRLGSVVGRVFVALMLTPTVTSAAALAAVQAVTHQPFAAENSRVAE
                     GCLRIENYARLANLPPGLVATDVDYGPFVLALTPHSVMSAPYHRLVAPLIEAHRIFAL
                     PPAAAREVIARARPTYLATCGRHTLAGIGDAERAASLWGRLKAGEIPDWLEPVPETRD
                     QPFVVYRVRP"
     gene            2647..3609
                     /locus_tag="VLJ17_14040"
     CDS             2647..3609
                     /locus_tag="VLJ17_14040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24135.1"
                     /translation="MTLRVVAFFFALFAVSLGSNLAAAAEPVFPLGSRMGFAPPPGFQ
                     ISKRFPGFENPEARSTILVATLPSQAYAEIEASMTTDALKKQGFTEDKRQTLTLAKGK
                     ALLVTGSEQENGQKYRKWMFLGQLPEGVALIAVLVPETAIKTYSDDVIKASLATLAAR
                     ASVPLEEQISLIPFKLTNLSGLRPIRVLGSAGVILTDGEKDIPTTPGDQAIFVVTIGQ
                     GGPEQATDRANFARNLFTGLGDLKEVRIISGDLLRLGGGNLTTHELQADAKEAFTDTP
                     VKLVQWVRFGQGSFIRMIGMARADQWPATFPRFRAVRDGVAPRD"
     gene            complement(3623..>3836)
                     /gene="grpE"
                     /locus_tag="VLJ17_14045"
     CDS             complement(3623..>3836)
                     /gene="grpE"
                     /locus_tag="VLJ17_14045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019172790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HSV24136.1"
                     /translation="DPQGVKFDPNLHQAIFEVPDADVAPGSIAQVIQPGYMIGERVLR
                     PAMVGVSKGAPKTAPPEQSADQKQSS"
BASE COUNT          815 a         1183 c         1173 g          665 t
ORIGIN      
        1 aatagctttt gccatccgcc tccacccagg catcgccatt gctggcgcgc atgatcttgt
       61 aggggacgag cttcttatcc ttttccacca tcgggtcatc atagcggcgt ccgatcagcc
      121 gcttgacggc gaagaaggtg cgttccggat tggtaactgc ctgacgtttg gcgggctggc
      181 cgacgagacg ttcgccgtcg tcggtaaatg ccacaatgga gggcgtcgtg ttgcgaccct
      241 ccgaattttc gatgaccttg gaagtcttgc cttccatcac ggcgacgcag gaattggtcg
      301 tgccgaggtc gataccaatg accttgccca tctcaatcaa tcctctcttt tcagcaggtc
      361 ggccgggccc gtgcggcacc cggaagaagc gtcgggcagg cctcgcacct gccttggacc
      421 gcccctggtc cgacccctca tcattacccg ccggccccgg cggggttcac agcgtcatat
      481 aggaggccgc catggcgctg caaggcggga ttgcgggaat cgtaagcgtt aacaagcgcg
      541 aaaactcgtc ctgccgaagc gtgccttagg ccgtaaattc acggcctaac acggtagacg
      601 acaaacggct gatcacgcgt ttcggggacc ggttcgagcc agtccggaat ttcgcccgcc
      661 ttcaaccgcc cccataggct tgcggcccgt tcggcgtccc caatacccgc gagggtgtgg
      721 cgtccgcacg tcgccagata ggtcggcctc gctcgtgcaa tcacctcccg ggcggcggcg
      781 gggggcaggg caaatatccg atgggcttcg atgagcggcg caaccaagcg atgatagggg
      841 gccgacatca cggaatgagg cgtcagcgcc aggacaaacg gcccataatc aacgtcggtc
      901 gccaccagtc cgggcggaag attcgccagc cgcgcgtaat tctcgatgcg cagacacccc
      961 tcagcgaccc gtgagttttc ggctgcgaag ggctggtggg tcacggcctg gacggcggca
     1021 agcgcggctg ccgaggtaac ggtcggcgtc aacatcagtg ccacaaacac gcgacccaca
     1081 acggagccca atcgcataac atcaaacagg cgcagcgcac cgaccgccac caaggggatc
     1141 gcgagccaaa tagcgtaact gtacgcccgg accatgacca tcatcacgat gcacgcgatc
     1201 aacagtgcaa cggcagccac gacgaaaccg aaatcgcgac gaattgaggg atcccgcgcc
     1261 aaagcgaggg taccgagcac agccactatc gggaacgctg cgaccgccgc cgccattggg
     1321 ggcgatgtca tggctaaggt ccaaagcgat cgcatctccg aaacatgatt gaaccaaatt
     1381 gtccgtacgg tggggtccat cgtggcgaag ggcccaaaga aacattgcgg ttcaatcgca
     1441 agaaacacgg ctgcggcagc gacgccggac accacgacag ccgttgcgcg agcccgccag
     1501 gaccaggccg caaaggcggt cgccgagatc gcgagcccaa gagtcgccgt ggtcactccg
     1561 gcggcggaat tgatcgcgat ggcatcgcag gccgtgctgc cccaacgcgc cggaccgatg
     1621 ctgaccagga atgcagtcgc aacactcgcg gctgcccata ggccatagcg ggcaagggga
     1681 cgggcgccat tagggtcgcg aacaaaacgc agcgccaacg cggcgccggc gagaacgacg
     1741 tagggcactc cttcaaaacc gatcgccact gcgaagccag tcaaggcgcc tgccacggcg
     1801 gccgcccact gcactcggtc ggaccagact gtggccgcaa cgagcagcat agacagcgcg
     1861 atttggacgt tgtgatggtc gattcgcccg ggaataaagt gctggaacgc cggcagccca
     1921 accgcagcca ataaaaaagc aaggggggct gccgcacgcc cgccgatacg ccatgcaatt
     1981 gcggccgcgc tcgccatggc gggaatcagc cacagcatcg gccagatcgt acgcacgagg
     2041 cgctccgcaa atgctgcgtc ggtgaattgg ttgaacacca gcagcattcc ggcgatgccg
     2101 gcatcgatca atcgcgacca atgcgtatcg tagccatcag gcggtccgag gcgcatttca
     2161 tgcaagtcga accagccccg cccggccaga aactcgcgca cttgcaccaa gcgcatggcg
     2221 tcgtccatgt cggacagcgt ttgggcggtt tcaggccagt gttctgccag aagctgcgcc
     2281 acgacgacga gccaagcgag tcctaacaag aggacaatag ggggcgattg caaccgcgcg
     2341 cacgcaggag gtgtcatggg aaccgagcct gcgatccagt taaggccgct tgcttgcaat
     2401 tccattaatg cgcatgtaat tgcggctcgc tgtcgcagta acgcaccggg tcggccgacg
     2461 aatgacactg gtggtgctag gtggagcata acggatggcg ttttacggca ctgaccacat
     2521 cgggactgga acttccatgc ttttgcccga agatggccgt atcagcctga ccttgcggcg
     2581 ggtcccgaca cgcgatgccg caatgagatc ataaggtcct gacaataatc ttaggggaat
     2641 ctgtccatga cactgcgcgt cgtcgcattt tttttcgcgt tgttcgcggt atccctaggg
     2701 agcaacctgg cggccgccgc cgagccggta tttccacttg gttcgcgcat ggggtttgcg
     2761 ccgccgccgg ggtttcagat aagcaagcgc ttccctggct ttgagaatcc cgaggcacgg
     2821 tcgacaatat tagtggcaac gctgccgtcc caggcctatg ccgagatcga ggcatcgatg
     2881 accaccgacg cactcaagaa gcagggcttc accgaagaca agcggcaaac actgacgctc
     2941 gccaaaggca aggcgctgct ggtgacgggg agcgaacaag agaacggtca gaaataccgc
     3001 aaatggatgt tcctcggaca actcccggag ggagtggccc ttatcgccgt gctggtgccg
     3061 gagacggcca ttaagaccta ttcggacgat gtgatcaaag cttcgctggc aacgctggcg
     3121 gcccgagcat cggtaccttt ggaagagcag atctctttga tacccttcaa gctgaccaat
     3181 ctttctggat tgcgaccgat ccgcgttctc ggcagcgccg gagtaatcct gaccgacggt
     3241 gagaaagata tcccgacgac gcctggcgac caggcaattt tcgtggtgac aatcggccag
     3301 ggtggccctg agcaggccac agatcgcgcc aattttgcac gcaatctctt caccgggctg
     3361 ggcgacctca aggaggtccg catcattagc ggcgacctgc tgcggcttgg tggtggtaac
     3421 cttaccaccc acgaactgca ggccgacgcc aaagaggcct ttacggacac cccggtgaag
     3481 ctcgttcagt gggtgcgctt cggccagggt agcttcatcc gcatgatagg catggcgcgc
     3541 gccgaccaat ggcccgcgac gttcccgcgt tttcgtgccg tacgcgacgg agttgcgcca
     3601 cgcgattagc cgagccagcg attcagctag attgcttttg gtcggctgac tgttctggcg
     3661 gcgccgtctt tggagctccc ttggagaccc ccaccatggc gggccggagc acccgttctc
     3721 cgatcatata accgggctga ataacctgag cgatcgagcc gggggcgacg tcggcatcgg
     3781 gcacttcgaa tatcgcctgg tgaagatttg gatcgaattt gacgccctgc ggatcg
//
LOCUS       DATILV010000603         1543 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2447020, whole genome shotgun sequence.
ACCESSION   DATILV010000603 DATILV010000000
VERSION     DATILV010000603.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1543
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2447020"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..218
                     /locus_tag="VLJ17_14050"
     CDS             <1..218
                     /locus_tag="VLJ17_14050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24137.1"
                     /translation="SIELEGKMASSVVDVLDKMKEFDKHHRALSKHKRASDKHKRDLD
                     NLKPRLQRLAKKLSIKAKGTGKKKSKR"
     gene            257..1273
                     /locus_tag="VLJ17_14055"
     CDS             257..1273
                     /locus_tag="VLJ17_14055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24138.1"
                     /translation="MGGRLPANTKRTSVLRRVPTSSTTRYLAVPGFEGHVCAFKVAPR
                     SGPLIVEAASGRAMTLLAGDVFLGTPGYRLSSRMAGRIPKRGLVPGKTYWLLAESGVV
                     GDLVGGTPHARTFRGQATYLGAIADDGGQIITIRQFAATAAHRQADHGAPVFLIVGTS
                     PEVGKTTAGLAVLRTLLDKGHATVIALKATGTSSVTEIMSYQDYGAAQVFDCVDFGMP
                     TTHPHNRKGIDRLFDRVLDTCLAIPADAVVIECGGDMLGGNVPTFLRCLRRRRPNTKV
                     ILAAADTLGAVGATKMLRDMGLSVHLITGPCTDTSAARQRTQALCRTPAMNLTRNESD
                     GARP"
     gene            complement(1278..>1543)
                     /locus_tag="VLJ17_14060"
     CDS             complement(1278..>1543)
                     /locus_tag="VLJ17_14060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24139.1"
                     /translation="KSLPKKADFAIPFRRFQRVGPQAGNEFEDFGVRCDYRYRMTRKD
                     VLHKNVDLIKYAASILKDIGAREARHDGSMRRLKKRPVHVINR"
BASE COUNT          346 a          420 c          467 g          310 t
ORIGIN      
        1 aatctataga gctggaggga aagatggcgt catccgtcgt agatgtgcta gacaaaatga
       61 aagaattcga caagcatcat cgcgccttga gcaagcataa acgcgcatcg gacaagcata
      121 agcgcgactt ggacaatctg aagcccaggc tgcaaaggct cgcgaaaaaa ctttcgataa
      181 aagcgaaagg gactggtaaa aagaagtcaa agcgttagtc cggccgaagg acgggcaagt
      241 aacaatcgcc gagcaaatgg gtggacgact cccggccaac accaagcgga cgtcggtgct
      301 gcggcgggtt ccgacttcct cgacgacgcg atatctcgct gttcccggat tcgaagggca
      361 cgtttgcgcc tttaaggtgg ctccgagatc cggaccgttg atcgtcgagg ctgcctctgg
      421 gcgcgcgatg acgctgctgg cgggtgatgt ttttctcggg acacctggat accggctatc
      481 gtcccgcatg gcgggccgca ttccaaagcg cggtcttgtc ccgggaaaga catactggct
      541 gctcgccgag agcggcgtgg ttggcgatct ggtcggcggc acgccgcacg caaggacatt
      601 tcgcgggcag gcaacatatc tcggagcgat tgctgacgac ggcgggcaaa tcatcacgat
      661 ccggcagttc gctgcgacgg ctgcgcaccg ccaagccgat catggcgcgc cggtattcct
      721 catcgttgga acgtccccgg aagtaggaaa gacgaccgcc ggccttgcgg tgctccggac
      781 gctgctggac aaagggcatg cgacagtgat cgcgcttaag gcgacaggca catcgtctgt
      841 caccgaaatc atgtcgtacc aagactacgg ggctgcgcag gtgtttgatt gcgtggattt
      901 tggaatgcca accacgcatc ctcataatcg caaaggcata gatcgcctat tcgaccgggt
      961 gctcgacacc tgcctcgcta tacccgctga tgctgtcgtg atcgaatgtg gcggcgacat
     1021 gctcggagga aatgttccga cattcctgag gtgcctcaga cgcaggcgtc ctaacacaaa
     1081 ggtcattctc gcggctgcgg atacacttgg cgccgtgggc gcgacaaaga tgctgcggga
     1141 catgggtcta tcggtgcatc tgatcaccgg cccatgcacg gacacatccg cagcgcggca
     1201 gcgcacgcaa gcactgtgta ggactcctgc catgaattta actcgaaacg aaagcgacgg
     1261 cgcgcggccg tgaggaatta gcgatttatc acgtggacgg ggcgtttttt caggcgccgc
     1321 attgagccgt catgtcgagc ttcacgcgcg ccaatatctt taagtatgct ggcggcatat
     1381 ttgatgaggt ccacgttttt atgcagaacg tccttgcggg tcatacggta gcgatagtcg
     1441 cacctaacac cgaaatcttc gaactcgttg ccggcttgtg gccctactcg ttggaatcgt
     1501 cggaatggaa tcgcgaagtc agctttcttg ggcaacgatt tga
//
LOCUS       DATILV010000604         5976 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3982112, whole genome shotgun sequence.
ACCESSION   DATILV010000604 DATILV010000000
VERSION     DATILV010000604.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5976)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5976)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5976
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3982112"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(681..1550)
                     /locus_tag="VLJ17_14065"
     CDS             complement(681..1550)
                     /locus_tag="VLJ17_14065"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018239961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSV24140.1"
                     /translation="MAKVAFLGLGVMGYPMAGHLKTKGGHEVTVYNRTAAKAEKWVAQ
                     FGGRSAPTPRAAAEGQDFVMACVGNDDDLRDVTLGTEGAFHGIAKGTVFVDHTTASAE
                     IARELHAAARKGGFDAIDAPVSGGQAGAENGALTVMCGGDAEPFGRAEKVIAAYARAC
                     NLMGAPGAGQLAKMCNQICIAGLVQGLAEALHFAKCANLDIEKLIATISKGAAQSWQM
                     ENRYKTMAAGKFDFGFAVDWMRKDLAICIAEARRNRAHLPVTALIDQFYSQVQKMGGK
                     RWDTSSLIALLDR"
     gene            2156..3280
                     /locus_tag="VLJ17_14070"
     CDS             2156..3280
                     /locus_tag="VLJ17_14070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0140663 - ATP-dependent FeS chaperone
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mrp/NBP35 family ATP-binding protein"
                     /protein_id="HSV24141.1"
                     /translation="MALTKSEVLASLERVASPDGLALPKTGTLSDIVVSDGKVFFSIT
                     VDAAVVNAWEPVRKRAEAAVKALPGIASVMVALTAERAARSTRPQPGATSPAAAAAAQ
                     RAHGTVGIPGVDAIIAVASGKGGVGKSTTAVNLALGLRDLGLRVGVLDADIYGPSIPR
                     LFAIKGRPQTKGGTRLIPMDGYGLKVMSIGFLIEEETPMIWRGPMVMSALTQMLREVE
                     WGELDVMVVDMPPGTGDAQLTMAQQVPLRGAVIVSTPQDLALIDARRGIAMFRRVDVP
                     VLGIVENMSYFLCPQCGTRSDIFGHGGARHEAERLGVPFLGEVPLRLEIRERSDAGLP
                     VVATVPDGPDAEIYRGIAALVRDQIAVGAGRVAPKIVIEA"
     gene            complement(3345..3524)
                     /locus_tag="VLJ17_14075"
     CDS             complement(3345..3524)
                     /locus_tag="VLJ17_14075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24142.1"
                     /translation="MAVVASILTAIYHVLKDGTMYKDLGCNHFDRRSTDQQKKRLVKR
                     LADRGYAVEIEPLAA"
     gene            3584..4094
                     /locus_tag="VLJ17_14080"
                     /pseudo
     CDS             3584..4094
                     /locus_tag="VLJ17_14080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020010.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
     gene            4296..5018
                     /locus_tag="VLJ17_14085"
     CDS             4296..5018
                     /locus_tag="VLJ17_14085"
                     /inference="COORDINATES: protein motif:HMM:NF016300.4"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HSV24143.1"
                     /translation="MVRRLTWIAVAMALIGAMMAPPATAQTNREGRIRILGHGSVETV
                     PDFVMVRVGISNRAASPTAALDQNSAIARKIVDFAKQFAISEQDIRSDSINLAQAFKS
                     VREPNGSTQQVPDGYNASNFVRVKIADMPRLGTFMRQILDQGATNISGVSFGLSNPEK
                     VADEARAKAMEDALHQAQQLAGSAKVKLGSILEIAHPPRIEFRAPVGEADLAVPRQRI
                     AVPIEVGTVTVKAEVDVTWTIE"
     gene            5347..>5976
                     /locus_tag="VLJ17_14090"
     CDS             5347..>5976
                     /locus_tag="VLJ17_14090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HSV24144.1"
                     /translation="MKRREFLKAAGLTGAAATAVAMPAIAQSTPELKWRCTSSFPKSL
                     DTIYGGAEVFAKAVAELTDNKFQIQVFAAGEIVPGLNAADAVTNGTVEMCHTASYYYV
                     GKDPTYAFATAVPFGLNSRMQNAWMFFGGGMELMNDFYKKANIYAFPCGNTGCQMGGW
                     FRKEIKEASDFNGLKFRIGGYAGRVLQKLGCVPQQIAGGDIYPALEKGTI"
BASE COUNT         1140 a         1860 c         1903 g         1073 t
ORIGIN      
        1 agccgcaagg actggtgtcg cccagcaata cgcgtccgac gacgggcccc aatacagcga
       61 ctactacccc cggcgtatcg ccccaagggc cgatctcgcc cggaaatgtt catccgggcg
      121 ctccgacgac ggccgtcaca cctggttcgg gccccccggg acaaacccat ccggatgggc
      181 gacgtccggt agagccttcc atcgccaaca caacggtggg gccagcaggc tctaagcccg
      241 gcacgttgcc tccggcgcag caacttaaca ggccgccgcc gcctcaggcg ccgccgccac
      301 gggctcccca agtggtgaac cggccaccgc ctccggcagc acccccgccg cccgtggtac
      361 gtacgccatc ggtcgtgcgt acggcgccgt caccgccgcc tccggcggca cgcgtagctc
      421 cgccaccccc gccgcccgtt gcacgcgtgg ctccgccgcc tccaccgccc gcggcacggg
      481 tggctccgca gccgcccccg cgcgcagctg cacctcctcc acccccgcaa gcggtcgcgc
      541 ggccggcgcc gcctccggca gcggcgaaga aatgcgtggt tgagaacggc aagcaggttt
      601 gtaggtgacc gcgtctgcct aaaagcccac ggcgacgaag cctcgccgcc gtggggggcc
      661 gcatggcctg gtagcgccta tcatcggtcc aggagtgcga tcaggctcga tgtatcccag
      721 cgcttgccac ccatcttctg aacttgcgag tagaactggt cgatgagcgc cgtaaccggc
      781 aagtgggcgc gattgcggcg tgcctcggca atgcagattg caaggtcttt gcgcatccag
      841 tcaacggcaa agccgaagtc gaattttcca gccgccatgg ttttgtaacg gttttccatc
      901 tgccaagatt gcgcggcacc tttggagatg gtggcgatca gcttctcgat atcgaggttg
      961 gcgcatttgg cgaaatgcaa tgcttcggca agcccctgca cgagcccagc gatgcagatc
     1021 tggttgcaca tcttggcgag ctggccggca ccgggggcac ccataagatt gcaggcgcgc
     1081 gcataggccg cgatgacctt ttcggcccgt ccgaacggtt ccgcgtcgcc gccgcacatc
     1141 acggtaagtg caccgttttc agcaccggcc tggccgccgg ataccggggc gtcgatggcg
     1201 tcgaagccgc ccttacgggc agcggcgtgg agctcgcgag cgatctcggc agacgccgtg
     1261 gtgtgatcga caaacaccgt gcctttcgcg atgccatgaa aggcgccctc cgtccccagc
     1321 gtgacgtcgc gcaggtcgtc gtcgttgccg acgcaggcca taacgaaatc ctgcccctcg
     1381 gcggcggccc gcggggtcgg cgcggaacgt ccgccgaact gcgctaccca cttctcggcc
     1441 ttggcggcag tacgattgta gaccgtgacc tcgtgaccgc ctttggtctt gagatgtccg
     1501 gccatcggat agcccatgac gccaagcccg agaaacgcaa cctttgccat gaagatcctc
     1561 cctgcggccg caacgggccg acctgtcgct acgaagtctc ccgccattaa gtcggcagcc
     1621 gaaattgcgc tccttgatgc gccgccacgc ccattcgcgt caactcgcgt gagatatcgt
     1681 atatggcgcg tgcgttgcag ggtgggtgag acgggcaaag ctttgcccgg acaagacccc
     1741 agccctccac caaacttgca cccgcgaagg tgacggcagg tcaattgcat atgccacgcc
     1801 agcagcgaac aagggccaca cccggctgaa gtttgtcgct agaaacgcgg acacaaaaaa
     1861 ccgcaggggg cacccgcggg ggctgccgga gccaagctcc ggtgctgtaa ttatcttgcc
     1921 acgaaaatta gccccgccaa gaaaaacgtc attcgcgagg ccgatgtcat gagatcgacc
     1981 atggatccac atcgagcgcc gcgaataggc ggggaccacg cggaacacgc cgggcgggga
     2041 gggtaattac ggggaggtag aaacatccgg ttcagttgac cgcaccgtgc cgattcctat
     2101 ttggtgtata gacgttccga ccccgtggag gcccgcggcg gtcatggaga gccttatggc
     2161 attgacgaag agcgaggttc tggcaagcct tgaacgggtc gcaagtccgg atgggcttgc
     2221 gttgcccaag accggcacgt tgtccgacat tgtggtgtcc gacggcaagg tgttcttctc
     2281 gatcactgtg gatgccgccg tggtgaatgc ctgggaaccg gtgcgcaagc gtgccgaggc
     2341 ggccgttaag gcgttgccgg gcatcgcctc cgttatggtg gccctgacgg cggaacgcgc
     2401 agccaggtcg acgcggcctc agcccggagc aacgtcgccg gccgccgcgg ctgccgcgca
     2461 gcgcgcccat ggcactgtcg gcataccagg tgtcgacgcc atcatcgcgg tggcgtctgg
     2521 caaaggcggc gtcggcaagt cgaccacggc ggtcaatctc gcactcgggt tgcgcgatct
     2581 tggacttcgg gtcggcgtgc tcgacgccga tatttacggc ccctcgatcc ccaggctgtt
     2641 cgccatcaag ggcaggccac agaccaaggg cggcacccgg ctcatcccga tggatggtta
     2701 tgggctcaag gtgatgtcga tcgggttcct gatcgaagaa gagacaccga tgatttggcg
     2761 tggcccgatg gtgatgtcgg cgctcactca aatgttgcgc gaggtcgagt ggggggagct
     2821 tgacgtgatg gtggtcgata tgccgcccgg caccggcgac gcccagttga ctatggcgca
     2881 gcaggtgccg ctgcgcggtg ccgtcatcgt gtcgacccca caggatctgg cgctgatcga
     2941 tgcgcgacgc ggtatcgcca tgttccgccg tgtcgacgtc ccggtgctcg gtatcgtgga
     3001 gaatatgagc tatttcctgt gcccgcaatg cggcacacgc tcggacatat tcggccacgg
     3061 cggtgcgcgc catgaggccg agcgcctcgg ggtaccgttt ctcggcgaag tgccgttgcg
     3121 cttggaaatc cgtgagagat ccgatgcggg gctaccggtg gtcgcgacgg tacccgacgg
     3181 ccccgatgcg gaaatctacc gcggtatcgc cgcattggtg cgcgatcaga tcgcggtcgg
     3241 ggcgggcagg gtcgcgccta agatcgtgat agaggcgtag cccaggaccg aaactcgctt
     3301 gttccgccac aaactcctct tgcgggcggt gccacaagca cgggtcaggc ggcgagcggc
     3361 tcgatctcca cggcgtagcc acggtcggcc aaacgtttga ccaggcgctt tttttgttgg
     3421 tcggtggaac ggcgatcgaa gtgattgcag ccgaggtcct tgtacatcgt cccatccttg
     3481 agcacgtggt agatggcggt caggatggag gcgacgacgg ccatgatcgc cttcttgggg
     3541 ccgcgccggg ctttgatgcg gtggagttga gcctgcaggt aaccgtcttt ccggcggcga
     3601 catctatccg gcgcctgagc gcggcaccat cgatgccgcc gaatggcgcg gcccctatga
     3661 cgatgagaag ctcggcttca gcaaggtcgc gaagtactac taccacccgg gctggtggga
     3721 gggctcgacc gtcgatcacc tgatgatcaa cctgtcgaag tggaacgagt tgcccaagcg
     3781 ctaccagtcg atcgttgcgg gcgcggcggc ctatgcgaat tccgaggaaa tggggcaagt
     3841 acgatgcccg caaccccggc gcgctacgca aactgattgc cggcggcacc gagttgcggg
     3901 ctttctcgca gccgatcatg gaggcgtgcc tcaaggcgtc caacgaagtg aacgccaaga
     3961 ccgcggccgg caatgcggat ttcaagaagg tgcaggattc aatgcaagcc ttccgcaacg
     4021 atgaatattt ttggtggcag gtcgctgaat acagctatga cacctttatg ataaggtccc
     4081 gggcgcgggc gtgacccgta gtcacccgcc cgctcctttg cgtgcactta caggggaggc
     4141 cgtcgcgtca ttcgtcggaa cgacgcatat ggccgcgatc cgggctacga cattgtcaag
     4201 aggccagctg cgccgaagat cgcgctcaaa agtcgcgctc ggactgtggg cgtgaggggg
     4261 taccgaatcg gccgcgatca gcgggacaat cggacatggt tagacgatta acgtggattg
     4321 ctgtggccat ggcgctgatt ggcgccatga tggctccgcc ggccaccgcg caaaccaatc
     4381 gcgaaggcag gattcgcatt ctgggtcacg gctcggtcga gacggtgccg gattttgtga
     4441 tggtgcgagt cggcatatct aaccgggcgg cgtcgccgac tgccgcgctc gaccaaaact
     4501 ctgcgatagc tcgcaagatc gtggattttg cgaaacagtt tgccataagc gaacaggaca
     4561 ttcggagcga ctccataaac cttgctcaag ccttcaagag cgtacgcgaa ccgaatggtt
     4621 cgacgcagca agtgcccgat ggctacaatg cgagcaactt cgttcgtgtg aaaattgcag
     4681 atatgccgcg tctcggaaca ttcatgcgcc agattctaga ccaaggcgca accaacatca
     4741 gtggcgtgtc gtttggcctg tcgaacccgg aaaaagttgc cgacgaagcg cgcgccaagg
     4801 cgatggaaga cgctctccac caggcacagc agctggctgg ttccgccaag gtgaagctcg
     4861 ggtcgatcct ggagatcgcc caccctccgc gcatcgagtt ccgcgcgccg gtcggcgagg
     4921 cagatttggc ggtgccccga cagcggattg cggttccgat tgaggtcgga accgtaacgg
     4981 tcaaggcgga ggtcgacgtc acctggacga tcgagtgagt aaccgtttga tgcgtatgcg
     5041 ccgcgcaatc tgcttcggca ggcacccgcc tcgactaccc ggcattcatc cgaaaggcat
     5101 gcgcggcccg gattgagcgt caaactaaat tcggggactg ccttcttcct ccgtatcgtt
     5161 agaccgctcc ctggcttcgc cctagcgctc aaaccgggca tctacgcgga tggagaagag
     5221 tgccgcaggc gaaaatggcg caccggtgta gtcattgagg gattccgccg atgcacggat
     5281 cgtgataaca aatattatta catgaccgcc ttgccctgcc agcagggggc ttttcaggag
     5341 gacaccatga aacgtcgcga atttctcaag gccgccgggc tgaccggcgc tgcggctacg
     5401 gccgtggcca tgcctgccat cgcgcagtcg acgcccgaat tgaagtggcg ttgcacatcg
     5461 agctttccaa aatcgctcga taccatttat ggcggcgccg aagttttcgc caaggcggtg
     5521 gctgaactca ccgacaacaa gttccaaatt caggtctttg ccgccggcga gatcgtgccc
     5581 ggattgaacg cggccgacgc ggtgaccaac ggcaccgtcg agatgtgtca caccgcctcc
     5641 tactattacg tcggcaagga cccgacctat gcgttcgcga cggcggtgcc gttcggcctc
     5701 aacagccgta tgcagaacgc ttggatgttc ttcggcggcg gcatggagtt gatgaacgac
     5761 ttctacaaga aggccaacat atacgccttt ccgtgcggca acaccggatg ccagatgggc
     5821 gggtggttcc gcaaggagat caaggaggct tccgacttca acggcctcaa attccgcatc
     5881 ggcggctatg cgggccgggt actccagaag ctcgggtgcg tgccgcagca aatcgccggc
     5941 ggggacatct atccggcgct ggaaaaaggc accatt
//
LOCUS       DATILV010000605         4410 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2189043, whole genome shotgun sequence.
ACCESSION   DATILV010000605 DATILV010000000
VERSION     DATILV010000605.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4410)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4410)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4410
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2189043"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(16..582)
                     /locus_tag="VLJ17_14095"
     CDS             complement(16..582)
                     /locus_tag="VLJ17_14095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24145.1"
                     /translation="MKTLVAAVAVALCAGIAVASGRAQEDAPKAGSDSNAPRADAVGI
                     GAGAAKPGDGFAGLQRRASRQALVANMPNSNTGIGSAFTRQGADPTVSRNAIGGAVAG
                     GPGHNLAVFIAHPGISTNGATGVAATGNAGGAGLQHPPVRFNAGPAPQRAGLNGAMMG
                     RIGSGLGHLGGAISDRSGIDGTRMRSKH"
     gene            complement(631..3876)
                     /locus_tag="VLJ17_14100"
     CDS             complement(631..3876)
                     /locus_tag="VLJ17_14100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012043573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0051139 - metal cation:proton antiporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CusA/CzcA family heavy metal efflux RND
                     transporter"
                     /protein_id="HSV24146.1"
                     /translation="MIKGLLTFGLTRRPIVLLILMIFVGGGLIAFTRLNIEAYPNPAP
                     VILEITAQNPGLSAEEMERYYTVPIEVGLAATPGVDNIRSTSFYGLTFVRVTFAYGID
                     YYFALTQVGINLQQNVNLPNGVTPQILGSSLVGEIFRYQLTGPPHFGLTNLRTVQDWV
                     LQRRLLSVPGVVQVNTWGGTTKEYEVEVDLNKLDAYGITLAQITAAIGNANTNVGGRT
                     INIGQQSVNIRGVGLIDSGGANDLTQGHNVSDIENIVLAQQNGVPVTIKDVAWVHVGN
                     APRLGKAGRDYEDDVVAAIVVMNRTLHTNDVAARIKAEVEKINSDGSLPPGVKMVPFY
                     ERTSLVAVTTATVTHNLVFGFILIFVIQWLFLGDLRSAIIVGTNIPFALFFTIIILVL
                     RNEDANLLSVGAVDFGIIVDAAVILVENIYRNFQARPEEKEIVLQELAEGKWGADPTR
                     TEEKAGPQIWTDRMRLILISALQIDKAVFFSTTIIVVAFIPLFTMQGVEGQIFSPMAK
                     TYAYALVGALIATFTVTPCLASLMLPAQIHEVETFIVRGIRWVYTPVLNWSLKQRKVS
                     VAIGAIFLGLTGVLASQLGSEFLPALEEGNLWIRATMPPTISLEAGLPIVNRLRETLL
                     KHPEVITVVSQHGRPDNGSDASGFFNAEFFVPLKPFDEWPKGLTKEKLIDQLQAEFTS
                     EYAGIGFNFSQYIQDNIEEGLSGVRGANSAKIIGPDLATLEELARQAMHEMDQVKGIT
                     DLGIFWVLGQPNLNIRVDRAKASRYGLNSGDINTVVQAALGGATATTLLEADRQFNVV
                     VRAAPQFRSSIDAVRNIKVGYQTPSGNAYIPLSELASITLDTGSSYIYRERNQRYVPI
                     KFSVRGRDLAGAVAEAQERIAKNVKLPAGYRIVWGGEFESLQMAKTRLSVIVPISLVL
                     IVVLLYGLFNSWRDSFMALLGIPFSIAGGVIALYVSDLNFSISAAIGFVSLFGVSVMS
                     GILIISCYNQVASTGLGTIDAMTKAVEQQMRPIMMMALSACIGLLPAAISSGIGSQVQ
                     RPLATVVVGGMLIGPVLLLVVVPALQTWFLDCKRNRREPAFHEDEPDLAEV"
     gene            complement(3906..>4410)
                     /locus_tag="VLJ17_14105"
     CDS             complement(3906..>4410)
                     /locus_tag="VLJ17_14105"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSV24147.1"
                     /translation="GNQPAPFTVTDVSTMWMLANVAESDSPAFKVGQQVKVSVMAYPG
                     RVFEGRISTIGSTVDPITHRVLVRSEIDNPLHELRSGMIANFVIRTGEPMRSVAVPVD
                     GVVREGDGTMTVWVTADRRRFTVRTVKAGLLRDGFYQILEGLHAGELVATEGALFLSN
                     ALAIAAH"
BASE COUNT          894 a         1353 c         1309 g          854 t
ORIGIN      
        1 ccaacctgtg attgtttaat gcttcgatcg catccttgtt ccatcgatgc cggaacggtc
       61 gctgatcgct ccgccgagat gcccaaggcc ggagccgatg cggcccatca ttgcaccgtt
      121 gaggcctgcc cgttgtggag ccggcccagc gttgaaccga accggcggat gttgcaagcc
      181 cgcgccgccg gcattgcccg tcgccgcaac gccggtggca ccgttcgtgc tgatccccgg
      241 gtgggctata aagaccgcga ggttgtggcc cgggccgccc gccaccgcac ccccgatggc
      301 gttgcgggag actgtagggt cggcgccctg acgcgtgaaa gcggaaccga tgccggtatt
      361 ggagttaggc atgttcgcga ccagcgcttg tcggctggcg cggcgctgca gaccggcaaa
      421 gccatctccg ggcttcgcag cgcccgcgcc gataccgacg gcgtcggcgc gcggagcatt
      481 gctgtcggag ccggccttcg gggcatcctc ttgagcacgt cccgacgcca ccgcaatccc
      541 ggcgcacaac gccaccgcaa cggcagcaac gagggtcttc acgcggctct ccttcgttcg
      601 attcacactc gcgaccgaaa cacctaacgc tcaaacttca gcaagatccg gttcgtcttc
      661 atgaaacgct ggctcgcgac gattgcgctt gcagtccagg aaccaagtct gcaacgccgg
      721 caccactacc agcagcagga ccggaccgat caacatgccg ccgaccacga ctgtcgcaag
      781 tgggcgctgg acctgactgc cgatgccgct cgagatcgct gccggcagca gaccgatgca
      841 agccgacaat gccatcatca tgatcggtcg catctgctgc tcgaccgcct tcgtcatggc
      901 gtcgatggtg ccgagaccag tgctcgccac ctgattgtaa cacgatatga tcaggatgcc
      961 gctcatcacc gatacgccga acaacgatac gaatccgatc gctgccgaga tcgagaaatt
     1021 cagatcggag acatagagcg cgataacgcc cccggcgatc gaaaaaggaa taccgaggag
     1081 cgccatgaag ctgtcgcgcc acgaattgaa cagcccgtag agcagcacca caatcaacac
     1141 caggctgatc ggcacaatca ccgacaagcg cgttttggcc atctgcaggc tttcgaattc
     1201 accaccccaa acgatccggt agccggctgg aagtttgacg tttttggcga tgcgctcttg
     1261 tgcttcggcg accgcgcccg cgaggtcgcg cccgcgcacg ctgaacttga tgggcacata
     1321 gcgctggttg cgctcgcgat agatgtagga ggagccggta tcgagcgtga tagaagcaag
     1381 ttcagacagc ggtatatagg cgttgccgct cggcgtctga tagccgacct tgatattgcg
     1441 gaccgcgtcg atgctgctac gaaactgcgg cgccgcgcgc accaccacat tgaactgcct
     1501 gtcagcctcc aacagcgtgg tcgccgtagc gccgccaagc gcggcctgca cgaccgtgtt
     1561 gatgtcgccg gaattaagcc cgtagcggga ggctttggcg cggtcgaccc tgatgttgag
     1621 attgggctgc cccagcaccc agaatattcc gagatccgtg attcccttga cctgatccat
     1681 ttcgtgcatg gcctggcggg ccagttcctc cagtgtggca agatccggac cgatgatctt
     1741 ggcggagttg gcgccgcgta cgcccgatag cccctcctcg atgttgtcct ggatatattg
     1801 ggagaaatta aagccgattc ccgcatattc gctggtgaat tcggcctgta gctggtcgat
     1861 cagcttttcc ttggtcaggc ccttcggcca ttcgtcgaac ggctttagcg gcacaaagaa
     1921 ttccgcattg aagaagccgc tcgcatcgct gccattgtcg ggtcggccgt gctgcgacac
     1981 caccgtgatg acctctggat gcttgagcag ggtttcgcgc agccggttaa cgatcggcag
     2041 tccggcctcc agcgaaatgg tgggcggcat ggtggcgcgg atccacagat tgccctcctc
     2101 cagtgctggc aaaaactcgc tgccgagttg cgacgccagc acacccgtca agccaaggaa
     2161 aatcgcgccg atggccacgc tgaccttgcg ctgctttagc gaccagttca gcaccggggt
     2221 gtagacccat ctgatcccgc gcacgatgaa ggtttccacc tcgtggattt gcgcgggcag
     2281 catgagcgag gcaagacatg gcgtcaccgt aaatgtcgcg atcaacgctc cgaccagcgc
     2341 atacgcatag gttttggcca ttgggctgaa gatctggcct tcgacgccct gcatcgtgaa
     2401 cagcggaata aacgccacca caattatggt ggtggagaag aacaccgcct tatcgatctg
     2461 caacgcgctg ataaggatga ggcgcatccg atccgtccag atttgcgggc cggccttttc
     2521 ctctgtgcgc gtcgggtcgg cgccccattt gccctcggca agctcctgaa gaacgatttc
     2581 cttttcctcc ggacgcgcct ggaagttccg atagatgttt tccaccagga tcacggcagc
     2641 gtcgacgatg atgccaaaat cgaccgcgcc gaccgacagc aaattggcgt cctcgttgcg
     2701 cagcaccagg atgatgatgg tgaagaacag cgcaaaggga atgttggtgc cgacgatgat
     2761 ggcgctgcgc agatcgccca gaaacagcca ttgtatgacg aaaatcagga tgaagccgaa
     2821 gacaagatta tgcgtgacgg tcgcggtggt cacggcaacc agcgacgtgc gttcgtagaa
     2881 cggcaccatt ttcacgccgg gcggcagcga gccatcgctg ttgatcttct ccacttccgc
     2941 cttgatacgg gccgcaacat cgttggtgtg aagtgtgcgg ttcatcacca cgatcgctgc
     3001 taccacatcg tcctcataat cacgaccggc cttgccgagc cgcggcgcgt tgccgacatg
     3061 gacccaagca acgtccttta tcgtcaccgg gacgccgttc tgctgggcca aaacgatgtt
     3121 ttcaatgtcg ctgacgttat ggccctgagt aagatcgttc gcaccgccgc tgtcgatcag
     3181 gccaacgccg cggatgttta ccgattgctg gccgatattg atggtgcggc cacccacatt
     3241 ggtattggcg ttcccgatag cagcggtgat ctgagccaat gtgatgccgt aggcatcgag
     3301 cttgttcaga tcgacttcga cctcatactc cttggtggtg ccgccccagg tattgacctg
     3361 gacgacaccc ggaaccgaca gcagtcttcg ttgcagcacc cagtcctgaa cggtgcgcag
     3421 attggtcaag ccgaagtgcg gtggacccgt gagctgataa cggaagatct cgccgaccag
     3481 gctcgatccg agaatttgcg gcgtcacgcc gttcggcaaa ttgacgttct gctgcagatt
     3541 gatcccaacc tgggtgaggg cgaagtagta gtcgatgccg tacgcaaaag tgacacggac
     3601 gaaggttagg ccgtagaacg aagtggagcg gatgttatcg acccccgggg tcgccgcgag
     3661 cccgacttcg atcggcacag tgtagtagcg ctccatctcc tcggccgaga ggcccgggtt
     3721 ctgcgcggtg atctccagaa tgaccggcgc cggattcgga taggcctcga tgttcaaccg
     3781 ggtaaatgcg atcaatccgc cgccgacgaa gatcatcagg atgagaagga cgattggtcg
     3841 ccgagtcaat ccgaatgtaa gtaacccttt gatcaccggt gacccctgtt agtggcgcgc
     3901 cggtctcagt gcgcggcgat cgccagggcg ttgctcagaa acagagcgcc ttcggtggct
     3961 accagttctc ccgcatgcaa accttcgagg atctgataga agccgtcgcg caggaggccg
     4021 gctttcaccg tccgcacggt gaatcgacga cggtcggcgg tcacccacac cgtcatggtg
     4081 ccgtcgccct ctcgcaccac gccgtccacc ggcaccgcga ccgagcgcat aggctcgccc
     4141 gtgcggatga caaaattggc gatcattccg gatcgcagtt catgcagcgg gttgtcgatt
     4201 tccgagcgga ccaggacccg atgagtgatc ggatcgactg tcgacccgat ggtggaaatc
     4261 cggccctcga atacacggcc cggataggcc atgacggaga ctttgacttg ctgtccgacc
     4321 ttgaaggcgg ggctgtcgct ctccgcaaca tttgccagca tccacatggt cgaaacgtcc
     4381 gtgaccgtaa aaggcgccgg ttggttgccg
//
LOCUS       DATILV010000606         8623 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1937133, whole genome shotgun sequence.
ACCESSION   DATILV010000606 DATILV010000000
VERSION     DATILV010000606.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8623
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1937133"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(159..326)
                     /locus_tag="VLJ17_14110"
     CDS             complement(159..326)
                     /locus_tag="VLJ17_14110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24148.1"
                     /translation="MALRDKLMLGSGLTRADEPEWMQGSGKLKHLHKETVRVQSMIDQ
                     EFEVIEPEDRS"
     gene            455..1444
                     /locus_tag="VLJ17_14115"
     CDS             455..1444
                     /locus_tag="VLJ17_14115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015685885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSV24149.1"
                     /translation="MKLPRRTFLRLAAGAAALPAVSRIAGAQGYPARPITFNVPFAAG
                     GPSDAMARVMGERMRVALGQPILIENVVGAAGSIGVGRVAHAPPDGYTVSVGHWSTHV
                     VNGAIYDLNYDLLKDLVPVVRLPSNPQLIVSKKNVPAANLKELIAWLKANESRTAAGN
                     AGAGSASHIAEIYFQNITGTRFTLVPYRGTGPALNDLVAGQIDLILDQASNSIAQVRA
                     GTIKAYAVTAKTRLPSLPEIPTVDEAGAPGLYISVWYGLWVPKGTPKDVIAKLGDAAI
                     AAMADPKVQTRMADFGLEMPPPEQQTPEALGALQKAEIEKWWPIIKAANIKAE"
     gene            complement(1503..2528)
                     /locus_tag="VLJ17_14120"
     CDS             complement(1503..2528)
                     /locus_tag="VLJ17_14120"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014498148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I fructose-bisphosphate aldolase"
                     /protein_id="HSV24150.1"
                     /translation="MNLVELNKVANAMVASGKGILAADESTGTIKRRFDSIGVENTED
                     NRRDYRELLFRSTDAMRDCISGVILYDETIWQKARDGTPLVRLIEQAGSIPGIKVDEG
                     TKPLPGCPNEVITIGLDKLADRLPKYYEQGARFAKWRAVIDIGAGIPTYSAIHANAHA
                     LARYAALCQSAQIAPIVEPEVLMDGDNDIDSCYEVTQWILKETFQELYHNRVALEGMV
                     LKPNMAVAGKKSAKRAGVDEVAEKTVRLLKACVPAAVPGIAFLSGGQSDEEATAHLDA
                     MNRVGDLPWKLTFSYGRALQHAPQKAWSGRAENVAAAQRAFSHRARMNGLASLGQWKS
                     ELEKRAA"
     gene            complement(2705..4003)
                     /locus_tag="VLJ17_14125"
     CDS             complement(2705..4003)
                     /locus_tag="VLJ17_14125"
                     /EC_number="2.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007605528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HSV24151.1"
                     /translation="MNAFRTLDEANVRGKRVLLRVDLNVPMEGGKVSDLTRLERIGPT
                     IVEIADSGAKVILLSHFGRPKTRDPKDSLKSVAAALACVLRRPIDFADDCIGPVAEAA
                     VAVMKSGDILCLENTRFHRGEEKNDPAFIDALAALGDIWVNDAFSCAHRAHASTEGLG
                     HRLPAYAGRAMQAELDALTKALESPKRPLAAIVGGAKISTKLDLLGNLVSKVDVLIIG
                     GGMANTFLAAQGRSVGKSLCEHGLAETARQILTKAKAKNCEIVLPVDAVVAKEFKAHA
                     ASHVTTINAVAADEMILDIGPRTVEHVVSVLARVKTLIWNGPFGVFEIEPFDNGTVEV
                     AEAAAELTAAGRLVSVAGGGDSVAALNAAGAAGRFTYVSTAGGAFLEWMEGKVLPGVE
                     ALRVRQDDFVKEESVRHTADSRASSSRKRSPGSNSGAAGY"
     gene            complement(4016..5023)
                     /gene="gap"
                     /locus_tag="VLJ17_14130"
     CDS             complement(4016..5023)
                     /gene="gap"
                     /locus_tag="VLJ17_14130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011084339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0019682 - glyceraldehyde-3-phosphate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HSV24152.1"
                     /translation="MSVRVAINGFGRIGRNVLRAIVEAGRKDIEVVGINDLGPVETNA
                     HLLRFDTVHGRFPGEVMVKGDTISVGNGAMKVTALKDPAQLPWNELGVDVALECTGIF
                     ASKDKASAHLAAGAKRVLISAPADGVDLTVVYGVNHDKLTNGHKVVSNASCTTNCLAP
                     VAKVLNDAVGIDKGFMTTIHSYTGDQPTLDTMHKDLYRARAAALNMIPTSTGAAKAVG
                     LVLPELNGKLDGVAIRVPTPNVSVVDFKFVAKRATSRDEINGAVKRAAEQQLKGILGF
                     TNEPNVSMDFNHDPRSAIFHMDQTKVMDGTLVRVMSWYDNEWGFSNRMADTAVAMGKL
                     I"
     gene            complement(5184..7163)
                     /gene="tkt"
                     /locus_tag="VLJ17_14135"
     CDS             complement(5184..7163)
                     /gene="tkt"
                     /locus_tag="VLJ17_14135"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HSV24153.1"
                     /translation="MANAIRALAMDAVEQAKSGHPGLPMGAADVATVLFTRFLKFDPA
                     DPRWPDRDRFVLSAGHGSMLIYALLHLLGYESMTIDEIKRFRQLGSLAAGHPEYGHPP
                     GVETTTGPLGQGLGNAVGMAIAERHLAAEFGADAVDHHTYVLASDGDLMEGISHEAVA
                     LAGHLRLAKLIVLFDDNGISIDGPLSLAESVDQLKRFEACGWSATQIDGHDPEAIAAA
                     IAWAKSTDRPALIACRTTIGFGAPTKAGTKDSHGSPLGADEIKGARQRLGWTAPPFEV
                     PADIRDAWRAAGQRGRPARLAWDKRIANLAADRRTEFNRRLAGDFPNEALAAAIRGLK
                     DKLAAAPKEIATRAASEFALEALTAAIPEMIGGSADLTGSNNTRPKGMAALSSTQPAG
                     RFIHYGIREHGMAAAMNGMALHGGVIPYAGTFLAFSDYSRPAIRLAAIMGQRVIHVLT
                     HDSIGLGEDGPTHQPVEHLAALRAIPNLLVFRPCDPVETAECWELALRARTSPSALVL
                     TRQNLPQLRSGFTLENRCAAGAYELMPAEGGEAQVSMFATGSEVAIAVEARKQLATHG
                     VTARVVSVPCLELFGSAPADTKAAIIGAAPVRIGIEAAIRQGWDAIIGSDGVFIGMTG
                     FGASAPAKELFRHFGITAERCTQAALAALTKLAGR"
     gene            7533..7835
                     /locus_tag="VLJ17_14140"
     CDS             7533..7835
                     /locus_tag="VLJ17_14140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4164 family protein"
                     /protein_id="HSV24154.1"
                     /translation="MSGPGDVTDPASGVDQAVKRVTDALDALDAALEQRLENEHKGGA
                     LTEQVHVFNVDRSRLASELDEARARARELETSNREAIRRIDEAMSAIRAVIAANQN"
     gene            7924..8310
                     /locus_tag="VLJ17_14145"
     CDS             7924..8310
                     /locus_tag="VLJ17_14145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015664378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HSV24155.1"
                     /translation="MAHVSVTINGRQYRMACDDGQEHHLARLAHDLDQRIANLRGSFG
                     KIDDMRLTVMAALILIDELWELRQRMHQIEAEFAGLQHARAAAADHSKAVEADIAAAF
                     NFAAQRIEKAVRLLGQADAGHPMAIG"
     gene            8365..8519
                     /gene="ssrS"
                     /locus_tag="VLJ17_14150"
     ncRNA           8365..8519
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="VLJ17_14150"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
BASE COUNT         1604 a         2708 c         2668 g         1643 t
ORIGIN      
        1 ccatttctcg taaatcttcc gatgcttcga acccatgatg ccgtatcgaa attcaccaac
       61 aacgataacc ggaatagcgg cgcggctatg caggcccaag atcgctccga cctcaggctg
      121 gccgtcgaca aacgccgaaa gcgcattggt atcgagaatc aactgcgatc ctcaggttcg
      181 atgacttcga actcttgatc gatcatggac tgcacgcgga cggtttcttt gtgcaaatgc
      241 ttgagcttac cagatccctg catccactcc ggctcgtcgg cgcgagtaag cccactgcct
      301 agcatcagct tatcgcgcaa tgccaactgc ggcgctctta atcgtgctgt gcggtcaatc
      361 gccgccctgt taatctgccc tgaccacctc cgtcttaagt gaaaatgagc gataatgaca
      421 tgattgcact cgctcagaaa tcgaggaaca cccgatgaaa cttccacggc gtacattctt
      481 gcgtctggcc gctggcgctg ccgcactgcc ggcggtgtca cgcatcgctg gggcacaagg
      541 ttatccggca cgtccgatca cgttcaacgt tccgtttgcg gccggcgggc cgtcggacgc
      601 gatggcacgc gtgatgggcg agcgtatgcg cgtcgcactc gggcagccta tccttatcga
      661 gaatgtggtc ggtgccgcag gctcgatcgg tgtcggccgc gtcgcgcacg ctccgccgga
      721 cggttatacg gtcagtgtgg gccactggag cacgcatgtc gtgaacggcg cgatctacga
      781 tttgaactac gacctgctga aggacctcgt gccggtcgtg cggcttccgt ccaatccgca
      841 gttgatcgta tccaagaaga atgtgccggc ggctaatctc aaggaactca tcgcctggct
      901 gaaagcaaac gaatcaagga ctgcggcagg caacgcgggt gcaggttctg cttcgcacat
      961 cgcggagatt tatttccaga acatcactgg cacgcgcttt accttggtcc catatcgcgg
     1021 caccgggccc gccttgaatg atctggttgc tggtcagatt gatctcatcc ttgaccaggc
     1081 gtcgaactcc atagcccagg tgcgtgctgg aacgatcaag gcctatgcgg tcaccgcgaa
     1141 gacccggctg ccttcgttac cggagattcc aaccgtcgat gaggccggcg cgcccggcct
     1201 ctacatttca gtttggtacg gtctgtgggt gccgaagggc acgccgaagg acgtcatcgc
     1261 caaactcggc gacgcggcaa tcgctgcgat ggccgatccg aaggtacaaa cccgcatggc
     1321 cgatttcggc ctcgaaatgc cgccgcccga acagcagacg cccgaggcgc ttggcgcttt
     1381 gcaaaaggcc gagatcgaga aatggtggcc gatcatcaag gcggcaaaca tcaaggccga
     1441 gtaatcccga ggcgccgcca ttgcgtgatc acagcgcgct caaggggtga ccgtcagtgc
     1501 cgttacgccg ccctcttttc aagttccgat ttccattgcc ccaagctggc gaggccgttc
     1561 atccgcgccc ggtgcgagaa cgcgcgctgc gcggcggcga cgttctcggc tcggcccgac
     1621 catgcttttt gcggggcgtg ctgaagcgcg cggccatatg agaacgtcag tttccacggc
     1681 agatcgccga cgcggttcat ggcgtcgaga tgggccgtcg cctcttcatc cgattgtccg
     1741 cccgacagga atgcgatgcc tggaacagct gccgggacac acgccttgag cagccgcacg
     1801 gtcttttccg cgacctcatc gacgccggcg cgcttggcgc tttttttgcc ggcgaccgcc
     1861 atgttgggct tgagcaccat gccttcgagc gcaacgcgat tgtggtacag ctcctggaag
     1921 gtctccttga gtatccactg ggttacctcg tagcagctgt cgatatcgtt gtcgccgtcc
     1981 atcagcactt cgggttctac gatcggcgcg atctgggccg actggcaaag tgccgcatag
     2041 cgcgccagcg catgagcatt ggcgtgaatg gcgctgtagg tcggaatgcc ggccccgata
     2101 tcgatcacag cacgccattt cgcgaagcgc gcgccctgct cgtaatattt cggcaagcgg
     2161 tcggcgagtt tgtcgaggcc gatggtgata acctcgttgg ggcatccagg cagcggcttg
     2221 gttccctcgt cgaccttgat acccgggatc gatccggcct gctcgatcaa cctgaccagt
     2281 ggcgtgccgt cgcgggcctt ctgccagatg gtttcgtcgt acaagatgac gccggagatg
     2341 caatcgcgca tggcgtccgt cgaacggaac agcagctcgc gatagtcgcg tcgattatcc
     2401 tcggtgttct cgacgccgat cgaatcaaaa cgccgcttga tcgtgccggt ggactcgtcg
     2461 gccgccaaaa tgccctttcc ggacgccacc attgcgtttg cgaccttgtt caattcaacg
     2521 aggttcatgg cattttctcc gtctgacacc gctaaagcgg atttcgtcct gatagaacca
     2581 aacaagcaaa atacgtcccg agaacgctgg gacctagcac ttgaggcact aacaccgcac
     2641 cgtaccggac ccttgcttgc gctcgggtcg cggctcgata gacgcaaaca ttaaagtcac
     2701 cacattagta ccctgcagca ccgctgttgc taccggggct ccgctttcgc gaggatgacg
     2761 cacgagaatc ggcggtgtgg cggaccgatt cttcttttac gaaatcatcc tgtcgcaccc
     2821 gcagggcctc gacgcccggc aacaccttgc cttccatcca ttccaggaaa gcgccaccgg
     2881 ccgtggacac gtaggtgaag cgaccggcgg cgcccgccgc attgagtgct gccacggaat
     2941 cgccgccccc cgcgaccgac accaaccttc cggcagcggt caattctgct gccgcctcgg
     3001 ccacctcaac ggtgccattg tcgaacggtt ctatctcgaa gacaccgaac ggaccattcc
     3061 atatcagcgt cttcacgcga gccagcacgg aaacgacgtg ctcgacggta cgcggcccga
     3121 tgtcaaggat catctcgtcc gccgccacgg cattgatcgt agtcacgtgc gacgccgcgt
     3181 gggccttgaa ctcctttgcc acgaccgcat ccaccgggag cacgatctcg caatttttcg
     3241 ccttggcttt cgtgagaatc tggcgcgctg tttcggcgag accgtgctcg cacagcgatt
     3301 ttccgaccga tcgtccctgc gcggcgagga acgtattggc cataccaccg ccaatgatca
     3361 acacgtcgac cttgctgacg agattaccga gcagatcgag cttggtcgat atcttggctc
     3421 cgccaacgat cgcggctaac gggcgcttcg gcgattcaag agccttggtg agcgcgtcga
     3481 gctctgcctg catggcgcgg cccgcatagg caggaagcct gtggcccagc ccttcggtcg
     3541 atgcatgcgc acgatgggcg catgagaacg catcgttcac ccaaatatcg ccgagcgccg
     3601 caagggcatc gataaacgcg ggatcgttct tttcttcgcc gcggtggaac cgggtgtttt
     3661 cgaggcacag aatatcgccg ctcttcatca cggccaccgc agcctcggcc actgggccga
     3721 tacagtcgtc cgcgaaatcg atcgggcgcc tgaggacaca ggccagggct gcggcgacgg
     3781 acttgagcga gtccttaggg tcgcgcgtct tggggcggcc gaaatgcgac agcaggatca
     3841 ccttggcgcc gctgtcggcg atctccacaa tggtcggccc aatgcgctca agccgcgtca
     3901 ggtcgctgac tttgccgccc tccatcggga cgttgagatc gacccggagc agcacacgct
     3961 tgccccgtac gttcgcctca tcgagggtac gaaacgcgtt cacggtttga ggccgtcaga
     4021 tcagcttgcc cattgcgacg gccgtgtcgg ccatgcggtt ggagaagccc cattcgttat
     4081 cgtaccagga catcacccgt accagcgtgc cgtccatgac cttggtctgg tccatatgga
     4141 agatcgccga tcgcgggtcg tggttgaaat ccatcgagac attgggttcg ttggtgaatc
     4201 ccagaatgcc cttgagctgc tgctcggcgg cacgtttaac cgcgccgttg atctcatccc
     4261 tcgatgtcgc gcgcttggcg acgaacttga agtcgaccac cgatacgttc ggggttggca
     4321 cccggatggc gacgccgtcg agcttgccat tcagctcggg cagcaccagg ccgaccgcct
     4381 tggcggcgcc ggtcgaggtc gggatcatgt tcagtgccgc cgcgcgcgcg cgataaagat
     4441 ccttgtgcat cgtgtccagc gtgggctggt cgccagtgta ggagtggatt gtagtcatga
     4501 atcctttgtc gatgccgacc gcatcgttga gcaccttggc gacaggcgcc aaacagttgg
     4561 tggtgcacga ggcgttggag acgaccttgt gaccgttggt gagcttgtcg tggttgacgc
     4621 catagaccac ggtaagatcg acaccgtccg ccggggcgga aatgagtacg cgcttcgcgc
     4681 cagccgcgag atgcgccgaa gccttgtcct tagaggcgaa gatgccggtg cattcaagcg
     4741 cgacgtctac tccgagttcg ttccacggca gctgcgctgg gtccttcaac gcggtgacct
     4801 tcatggcgcc gttgccgacg ctgatcgtgt cgcccttgac catgacttcg cccggaaagc
     4861 ggccgtgcac ggtatcgaaa cgcagcagat gcgcattggt ttcgaccgga ccgagatcgt
     4921 tgatgccaac gacctcgatg tctttgcgtc cggcctccac aatggcgcgc aagacattgc
     4981 ggccgatgcg gccaaacccg ttgatggcga cgcgaactga catttccggc tcctcggtgt
     5041 ccaatcttcg tttgcgctag gggcacggcg gcttaggcca ccacgtcgta tcggaggatc
     5101 aaaagacgcg aaagctgggc gcgataccgt gcacaatttt gaggcgttga taacataagc
     5161 gcgcgcgctt tccagcgctc atttcagcgg ccggcaagtt tggtcaatgc cgccaaggcg
     5221 gcttgcgtgc agcgctctgc tgtaatcccg aagtggcgaa aaagttcctt ggcaggggcg
     5281 ctcgccccga atcccgtcat gccgatgaac accccatcgg agccgatgat ggcatcccaa
     5341 ccttgtcgga ttgccgcctc gataccgatg cggacgggcg cggccccgat gatggccgcc
     5401 ttcgtgtcgg ctggggcgct cccgaacaac tcgaggcaag gtaccgacac cacccgggca
     5461 gtgacgccgt gagttgctag ttgcttgcgc gcctccaccg cgatcgcaac ctccgagccg
     5521 gtggcaaaca tcgacacttg cgcctctccg ccttcggcgg gcatcagctc atatgcaccg
     5581 gccgcgcagc ggttctccag cgtgaatccg ctgcgcagct ggggtaggtt ctgccgtgtc
     5641 agcaccagcg cactcggtga cgtacgcgca cgaagtgcga gttcccagca ttctgccgtc
     5701 tccaccgggt cgcagggccg gaatacgagc aggttcggga tcgcccgcag cgccgcgaga
     5761 tgttcgaccg gctggtgcgt cggcccgtcc tcgccgaggc cgatcgagtc gtgagtgagc
     5821 acatggatga cgcgctggcc catgatggcg gccaggcgaa tcgcgggccg gctgtaatcc
     5881 gagaacgcga ggaacgtgcc cgcatacggg atgacgccgc cgtgcagggc catgccgttc
     5941 atggcagcag ccatgccgtg ctcgcggatt ccgtagtgga tgaaccgacc ggcgggctgg
     6001 gtggacgaca gcgccgccat gcccttgggc cgcgtgttgt tcgatcccgt gaggtccgca
     6061 gacccgccga tcatctcagg gatggccgcg gtcagcgcct ccagcgcgaa ctcggacgca
     6121 gccctggttg cgatttcttt tggggcggcc gcgagcttgt ccttgagccc gcgaatggcg
     6181 gcggccagcg cttcgttcgg aaaatcgccc gcgagcctgc ggttgaactc ggtgcgcctg
     6241 tcggcagcca ggtttgcgat ccgcttgtcc caggccaggc gagccggccg gccacgttgt
     6301 cccgccgccc gccaggcgtc gcgaatatcg gccggcacct cgaaaggcgg cgcagtccag
     6361 ccaaggcgct ggcgggcgcc cttgatttcg tcggcgccaa gcggcgagcc atgactgtct
     6421 ttggttcccg ccttggtggg ggcgccgaac ccgatggtgg tgcggcaagc gatcaaggcc
     6481 ggtcggtcgg ttgatttcgc ccacgcaatg gcggctgcga ttgcttcagg atcgtgacca
     6541 tcgatctggg tcgcgctcca gccgcacgcc tcgaaccgct tgagctgatc gaccgattcg
     6601 gcgagcgaca gcgggccgtc gatcgaaatg ccgttatcgt cgaacagcac gatcagcttg
     6661 gcgagccgca ggtggccggc gagcgcgacg gcctcgtggc tgattccctc catgaggtcg
     6721 ccgtcggagg ccagcacgta ggtgtggtga tcgaccgcat cggcgccgaa ttcggccgcg
     6781 agatgccgct ccgcgatcgc catgcccacc gcattgccga gcccctgtcc gagcggtccc
     6841 gtggtggtct cgacgcccgg cggatgaccg tattccgggt gtccggccgc aagcgagccg
     6901 agctggcgaa aacgcttgat ctcgtcgatt gtcatcgact cgtagccgag aaggtggagg
     6961 agcgcgtaga tcagcatcga gccgtgaccg gccgagagca cgaaacggtc acgatcgggc
     7021 cagcggggat cggccggatc gaacttcaag aaccgcgtga acaggacggt ggcgacatcg
     7081 gcggccccca tgggcagacc cggatggccg ctcttcgcct gctcgaccgc gtccatggcg
     7141 agcgcccgaa tggcgttcgc catgcggtta tgagccgcac ggctccttga ggccggggtc
     7201 tccgaaccat catgatgtgg ccgcgatgcg gtgacgattt ggtccgctgg tcccatggac
     7261 tggctcgaaa agcggctagc aggaaaatgc cgaacggtgg cgaggaacgg gctcgacgcc
     7321 cgggatcccg acgcaactcc gccgtccaag gcaggaattg attagcacgt gagcttcgcg
     7381 agtcaacgaa acggccacct cgaccgctcc gccccacaca agttgggcag aacctcgccg
     7441 agaattggcg tttgcgttga cgccaggttg acgatacccg taaagttcaa ggcgaatggg
     7501 cagaaaggcg agcaattaga ggctgtcagg agatgtccgg gccaggcgac gtaacagacc
     7561 ccgcgagcgg cgtcgatcag gcggttaaac gcgtgaccga tgcccttgat gcactcgacg
     7621 ccgccctgga gcagcggctg gagaacgagc acaagggcgg tgcgctcacc gagcaggtcc
     7681 acgtcttcaa tgtcgatcgg tcgcgccttg catccgaact tgacgaggca cgggcccgcg
     7741 cgcgtgagct tgaaaccagt aatcgagagg cgattcgccg gatcgacgag gcgatgagcg
     7801 ccatccgggc ggtcatcgct gccaaccaga attgaccgta cacgcgcgtg attccgacaa
     7861 agttgcggac ctttcgaata agatcatgcg caaaataaaa ctttgcgaaa cgagagttct
     7921 ctcatggccc atgtgagcgt caccatcaac ggccgccaat atcgcatggc ctgcgacgac
     7981 ggccaggagc atcatttggc gcggcttgcc catgacctcg accagcgcat cgcgaatttg
     8041 cgcggttcct tcgggaaaat cgacgatatg cggctcaccg tcatggcggc gctgatcctc
     8101 atcgacgagc tgtgggagct gcgccagcgc atgcaccaga tcgaagccga gttcgccggc
     8161 ctgcaacacg cgcgcgcggc tgcagcagat cactccaagg cagtggaagc ggatattgcg
     8221 gcggccttca atttcgccgc ccaacgcatc gagaaggccg tgcgattgct tgggcaggcg
     8281 gacgccgggc atccgatggc catagggtga cctgcgccaa aattgccgat agcaaatcct
     8341 cgccacgcgc actagattgt cggagcgggg ctgctgagtg cgttgggagc cttatccccg
     8401 gggccttatc gatcctgaag ggagctgtcc ctgaccgggc tcgtgggctc ggacatatgg
     8461 cgcccaccta cgctgtaggt acccgggatc gagcgctctg acggccaagc ggctccgcac
     8521 ttcttccttc cggtcgggcg ccggacgtat ggattccact cgatcggatg cagctctccg
     8581 cttctcctga aaataccaag gcagtgctgc ggcgcgaggc gtt
//
LOCUS       DATILV010000607         4404 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3723965, whole genome shotgun sequence.
ACCESSION   DATILV010000607 DATILV010000000
VERSION     DATILV010000607.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4404
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3723965"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            231..2174
                     /locus_tag="VLJ17_14155"
     CDS             231..2174
                     /locus_tag="VLJ17_14155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015664947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PrkA family serine protein kinase"
                     /protein_id="HSV24156.1"
                     /translation="MDSDSLFNAFARSFEARGQTDLSMAEYLESCRTDPMRYANAAER
                     LLAAIGEPQMIDTAKDARLGRIFSNRTIRSYPAFAGFHGMEDTIERMVGFFRHAAQGL
                     EERKQILYLLGPVGGGKSSLAERLKQLMEVHPIYVLKAGDELSPVFESPLSLFDPETL
                     GPMIEEKYGIPRRRLTGLMSPWCNKRLEVFGGDISQFRVARIQPSRLRQIAVAKTEPG
                     DENNQDISSLAGKVDIRKLETYAQSDSDAYSYSGALNRANQGILEFVEMFKAPIKMLH
                     PLLTATQEGNYIGTENIGAIPFNGIILAHSNEAEWQGFKANKKNEAFIDRVCVIKVPY
                     CLRVTEEQKIYEKLIQQSELASAPCAPATLETMARFSVMTRLRKHENSTLFAKMRVYD
                     GESLKESDPRARSVQEYRDAAGVDEGMDGASTRFAFKVLAATYNHDTAEVGADAVHLM
                     YVLEHSIRREQLSEEVEKRYLEFIKADLAPRYAEFIGNEIQKAYLESYADYGQDLFDR
                     YVDYADAWIEDQDFKDPDTGQLLDRELLNQELTKIEKPAGIAHPKDFRNEVVKFSLRS
                     RVRNGGKNPSWTSYKKIREVIEKRIFSRVEDLLPVISFGTKKDGETEKKHDDFVARMV
                     QHGYTERQVRRLVEWYMRVKQAG"
     gene            complement(2423..3223)
                     /locus_tag="VLJ17_14160"
     CDS             complement(2423..3223)
                     /locus_tag="VLJ17_14160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HSV24157.1"
                     /translation="MPWTIERKHDHVVVVTMNTNKVNAQNPAFFADLHAAFDRLETEF
                     DDCAVVLTGTGKVFSAGLDLDHHFAMFARRNLREINDWFAAYRATNLRLFTYPRPTVA
                     AINGHAYAGGFITAIVSDYRIAMEGALQFALNEVPIGIPMPAVYCEIIKYAIGTQAAS
                     EFTLFGQVYDLEAASRMGVVQKTVASDQLLNAAVAWAAHVTPDCYPAYSFSKRALQAA
                     TMAAIDAAARLDRDWLSRGMSDPKSLRANARRYRELKGKEISWPLPTQ"
     gene            complement(3284..4096)
                     /locus_tag="VLJ17_14165"
                     /pseudo
     CDS             complement(3284..4096)
                     /locus_tag="VLJ17_14165"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
BASE COUNT          942 a         1295 c         1321 g          846 t
ORIGIN      
        1 caacgtcccc acgggattgg agtccggtgg cgcgaagtga agctggatca atgcggtctt
       61 cccatgttgc gacccaccgc cttgatatcc tgttcgcgaa tagccaattt aggaacatgt
      121 tggaatggga ggaccccgac tgcacgatca gatgaactga ctaaggccgg taccgagcgg
      181 taactcgact cggttcacca gtgcggcgga tcataccttg gagggggatc atggatagcg
      241 attctctgtt caatgctttc gcccggtcct tcgaggctcg aggtcagacc gatctgtcga
      301 tggcggaata tctggaatcg tgtcgaacag atccgatgcg atacgctaat gcggccgaac
      361 gattactagc tgcgatcggt gaacctcaga tgatcgacac ggccaaggac gctcgccttg
      421 gccgcatctt ttccaatcgg acaatacgca gctatccggc cttcgccggc ttccatggca
      481 tggaagacac gatcgagcgc atggtgggat ttttccgcca tgcggcgcag ggcctggagg
      541 agcgcaagca gattctctac ctgcttggtc cagtaggcgg cggcaaatcg tcgctcgccg
      601 agcggctcaa gcagctgatg gaagtccatc ccatctacgt gctcaaggcc ggcgacgagc
      661 tgagcccggt cttcgaaagc ccgctcagcc tgttcgatcc agaaaccctt gggccgatga
      721 tcgaggagaa atacggcatt ccgcgccgcc gcctcaccgg tctgatgagc ccctggtgca
      781 acaagcggct agaggtgttc ggcggcgaca tctcgcagtt ccgcgtggca aggattcagc
      841 cctcacggct gcggcagatc gcggtcgcca agaccgagcc gggtgacgag aacaaccagg
      901 atatctcctc gctggctggc aaggtcgata tccgcaagct cgagacctac gcccagagcg
      961 attccgacgc atatagctac tccggcgccc tcaatcgcgc taaccagggc atcctcgaat
     1021 tcgtcgagat gttcaaggcg ccgatcaaga tgctgcatcc gctgttgacg gcgacccagg
     1081 agggcaacta catcggcacc gagaatatcg gcgcgatccc gttcaacggc atcatcctgg
     1141 cgcactcgaa tgaggcggaa tggcagggct tcaaggccaa caagaaaaac gaggcgttca
     1201 tcgaccgcgt ctgtgtcatc aaggtgcctt actgcctccg cgtcaccgag gagcagaaga
     1261 tctatgagaa gctgatccag caatccgagc tcgccagtgc gccttgcgcg ccggcgacgc
     1321 tggagacgat ggcgcgcttc tcggtcatga cgcgcctgcg caagcacgag aactcgacgc
     1381 tgtttgccaa gatgcgggtc tacgacggcg aaagcctaaa ggagtccgat ccgagggcgc
     1441 gcagcgttca ggaataccgg gatgcggccg gcgtcgatga gggcatggac ggcgcctcca
     1501 cccgctttgc cttcaaggtt ttggcggcca cctacaatca cgacaccgcg gaggtcggcg
     1561 ccgacgccgt ccacctgatg tatgtgctgg agcattcgat ccggcgcgag cagttgtcgg
     1621 aggaagtcga gaagcgctat ctcgaattca tcaaggcgga cctcgcgccc cgctatgccg
     1681 agttcatcgg caatgaaatc cagaaggcct atctcgaatc ctatgccgat tacgggcagg
     1741 acctgttcga tcgttacgtt gattacgccg atgcctggat cgaggatcag gatttcaagg
     1801 accccgatac gggccagttg ctcgatcgcg agctgctcaa tcaggagctg acgaagatcg
     1861 agaagcccgc gggcatcgcc catcccaagg atttccgcaa cgaggtggtg aagttctcgc
     1921 tgcggtcgcg cgttcgtaac gggggcaaga atccctcttg gacctcttac aaaaaaatcc
     1981 gcgaagtgat cgaaaagcgg atattctcgc gggtcgagga cctgttgccg gtgatttcgt
     2041 tcggcacgaa gaaggacggc gagaccgaaa agaaacacga cgatttcgtc gctcggatgg
     2101 tgcagcacgg ctataccgaa cggcaggtcc ggcggctcgt cgaatggtac atgcgcgtga
     2161 aacaggccgg gtgaggcgcc ccaacagcgt cattcatatc gtcgaccggc ctgaatccgg
     2221 ggcaagagca atcaaccaac cgcatcacct tgagctgccg gatcttgcaa gggccgcgcc
     2281 acatctcgac tctaccaaaa gcgccgtttt ggaaggcagt cgatcacttc cggtctaccc
     2341 cacaagcaga ccatttcaga gcccgtccct acttcgcgtt agggccagaa gcggacgaag
     2401 cccctgacga caaaggccaa ggtcattgcg tgggaagcgg ccaagatatc tccttaccct
     2461 tcagctcccg gtagcgccgc gcgttcgcac gcagactttt ggggtccgac atgccccgcg
     2521 acagccagtc ccgatcaagg cgcgctgctg catcgatcgc ggccatcgtc gcggcttgta
     2581 gggcgcgctt ggaaaatgaa taggccggat agcagtcagg cgtcacgtga gcggcccaag
     2641 ccacagcggc attcagaagc tggtccgatg ctacggtctt ctgcacgacg cccatccgac
     2701 ttgcggcctc caaatcataa acctgtccaa atagcgtgaa ctcggacgcg gcctgcgtgc
     2761 cgatcgcata tttgatgatc tcgcaatata ccgccggcat cggaatgccg atcggcacct
     2821 cattcaacgc aaactgcaat gcgccttcca tagcgatccg atagtcgctg acgatcgccg
     2881 tgatgaaccc accagcataa gcatgaccgt tgatcgccgc gacggtgggt cgcggataag
     2941 tgaacagacg aagattggtg gcgcgatagg cagcgaacca atcgttgatc tctctaagat
     3001 tgcggcgcgc gaacattgcg aagtgatgat ccagatctag gcccgccgag aacaccttgc
     3061 ccgtccccgt cagaacgacg gcgcagtcat cgaactcggt ttcgaggcga tcgaacgcgg
     3121 catggagatc ggcaaagaac gccgggtttt gcgcattcac cttgttggtg ttcatcgtca
     3181 cgacgacgac gtggtcatgt ttgcgctcaa tcgtccaagg catggcacgt ttcctttgat
     3241 gttggcggac tgtcggtcga tgcgagaagg taaagctgcg ctctcagttg agcttgaata
     3301 cgcggtttgc attaccggcg aggaacgcgg ctgtggctgc gtccccgaga tcgagggcgt
     3361 cgagaccggc gacgcattcg ccggctggcc agaacgggtg gttcgatccg aataggatgc
     3421 ggtgcctcgg gttgttgcgc atgtaatcaa ccagctcctt ggggtaccgg ctgaccttgt
     3481 aggcaaacgt atcgatgaag acattcggat acttcataag cagcgagagc atttcgccga
     3541 gccaaggcac acctatgtgg ccaccgatga tgcggagttc gggaaattcg accgcgacac
     3601 gatccagtta ggggatgggc cgaccgggct ccgattctct aagtggcccg gcatgtccga
     3661 cctgcgtgca gaatggaatg tcgagttcgc agcactccgc aaatagcgga tagtagcgtc
     3721 ggtcgtcggg cggcagcccc cagacccacg gcaagacccg cagccctttg aaaccgtctt
     3781 gcttgacacg gcggcggagt tcgcgcacgc catccatggg tcgatagagg tcgacagacg
     3841 ctacgcccac gaagcgaccc ggatgcgcac gacaaaattg cagtacctcg tcattgctga
     3901 tcatcgggcc ggacggccca tgccacgcac agagcatgcc ggtcgagacg cccgctaaat
     3961 ccatttcggc aatggtcgcc tctatgggtt ggcttgtctc ggaccatttg ccgggcttcc
     4021 accgccggag cgagttgaac atcgggttgc cgatccactc cgcattcggg tgctgcatcc
     4081 aagcgtcaat gatcatagca gctcctagct gatgcgcccc gtcgatggct cgcgaagtct
     4141 atcgggaaca aagggcagtt gccaatgagg tcagggtgtg gcgtcgccgg tccgaagtcc
     4201 gaagctacaa tattgagggg atctccgttt gtattacccg ccctgttggt agtgcaacag
     4261 ggcagctgcg ccagctttcg cgtagtgtac tgcggcccgg ttttgagaca cccggctgag
     4321 cttatgttgc cagccgtcga cctcggtggc cgagtatggc tgggtagcaa gtcctgtaaa
     4381 ggcgggcctt cggcccccgc cttc
//
LOCUS       DATILV010000608         4977 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1424453, whole genome shotgun sequence.
ACCESSION   DATILV010000608 DATILV010000000
VERSION     DATILV010000608.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4977)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4977)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4977
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1424453"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1111)
                     /locus_tag="VLJ17_14170"
     CDS             complement(<1..1111)
                     /locus_tag="VLJ17_14170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24158.1"
                     /translation="MSSVDVAASEQAAAGARSNADKALSNLFGRSEVRPAKNSEAVQH
                     GAAKDGDNPNGYDLTNPNLHYGTRTDVEVGNGLADRTSTGPSVNSNEPFVESSIVRAS
                     AERVNQAAGDTNPIAVSGQTDESQPHAFDVSGQSLASVGHAPAAPSGTHVDRTIEAPT
                     GAVSGTQVSGDHGDNPITVTATGAPGQATGESVHVAVSHSGPTATTAGPSANEGHTSS
                     HDASGHVATPSAGDTPTGNETHSGSTGTANVGPSASDSGSATADVGQSANDSQSSSPD
                     VSGHVAVPSAGDAPTVGDSGPAATADAQSTNGSPASSPDVSSHVAAPAAGDTPTVSDS
                     SPAATADAGQSANDSQASTPDVSSHVAAPAAGDAPT"
     gene            1364..3112
                     /locus_tag="VLJ17_14175"
     CDS             1364..3112
                     /locus_tag="VLJ17_14175"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HSV24159.1"
                     /translation="MPTLVSLSSRLFAIGPWKAAARRPISVVSVVNGKRIHEPTFPLP
                     VYFASLAINLLALAMPLSIMQVYDRIIPNHSLGTLALLFFGLALALIIEFVLKVMRSA
                     LLCWQTKCFVRDTENEAIARVLRAPESEFEHRPAAVHMNRYAAVSALGDYHCGAARLV
                     SIDLPFVAIGLTVMSTVGGIMVFVPIGLFFVFSTLAMHRSRKLRDVLHDRAAQDNRKY
                     DFIAEVLGGIHTVKILALEPQMQRRFERLQQAVAETTMSSILTGQAAQTSALLYGSIS
                     QLIVVAIGATRVIDNQLSMGALACCTMLSGQILQPLLGAISQWMENETLYQRRQEVRE
                     LLDMRELEVASPECRSIRGDISFENVTFAYDAAAASILHTIDFSVTAGEIIGIKGEDG
                     SGRTTLINLLLGEIKPVSGRVMVDEISTVAPEFLSLRRHMITVRGAPVIFRGTIMENL
                     TVFRPERRERARKMTRLFGLDASINLMPDGFETRLGEALADDLPISIAQQLNIVRALT
                     SNPKILVLDEANAALDVIAEAALIRAIDSLRGHLTIIIVTHRPSLLARADRVLVVRKG
                     RVGWETSAPDSSVRAS"
     gene            3205..>4977
                     /locus_tag="VLJ17_14180"
     CDS             3205..>4977
                     /locus_tag="VLJ17_14180"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HSV24160.1"
                     /translation="MARVAEAFATEPDDTVHRSETSLLAVIDSVVRPRTPAETCLAPT
                     LALLGWAGEARHIREALPHFDTINDCEGLCSVLARLSYRATRNTAKLSELRAEALPCL
                     FSREGTDVVLVVDRESDGRLLIFDGASKGWRFVEPDNQSGWAYRILALSTEDEAEGPG
                     KSWLLSAILRFKPVVTAALVLSFFGNLAALTVPIFVMYVYDLGIGAKSTSVVILLGVG
                     ASIVIATNFAFRQIRAYAMAYFGARIDALIGMGAFERLLQLPIAMIESAPIGVQMSRL
                     KQFESVRNTFTSTLATSIIDIPFIFIFLVAIAYWGGLLVWVPVSLIILYTALSAVTIP
                     MTRNYVVAVGSTKQRVDLLLHEIFAKRRAIRALGAEEIWIARHRECVEMLTRQNYQAQ
                     RFNHIVQNLGQTLVSIAGIATLALGTLRVTGGSMTSGSLIGVMALVWRVLSPLQSTYL
                     SVPRLVQAIQTFRQVDRLMKIRGERNTHTPQTFHRRFKGQISLQRIVFRYPQRSEPVF
                     RGIQLDIKPGQMIAVTGASGAGKTTLLRLIAGLYPPIAGAVLIDDLDLRQIDPAEWRS
                     EIAFLPEKATFFYGTLAQNIRLARP"
BASE COUNT          958 a         1456 c         1459 g         1104 t
ORIGIN      
        1 ccgtcggggc atcgccggca gccggggccg cgacatgact ggacacatcg ggcgtggagg
       61 cctggctgtc gttagcgctc tgccccgcat cggcggtggc ggctgggctg ctgtcgctga
      121 ccgtcggggt gtcgccggca gccggggccg cgacatgact ggacacatcg ggcgaggacg
      181 ccgggctgcc gttggtgctc tgcgcatcgg cggtggcggc cgggccgctg tcgccgaccg
      241 taggggcatc gccggcggac gggaccgcga cgtgaccgga gacgtcgggc gaggacgact
      301 ggctgtcgtt agcgctctgc cccacatcag cggtggccga gccgctgtcg ctggcgcttg
      361 gccccacatt tgccgtgccg gtcgagccgc tgtgggtctc gttgcctgtg ggtgtatcac
      421 cggccgacgg ggtcgcgaca tgacctgagg cgtcgtgcga ggaagtgtgg ccctcgttgg
      481 cgctaggccc cgctgtggtg gccgtcggtc cgctatggct caccgcaacg tgaacgctct
      541 ctccggtggc ctggccggga gcgccggtgg cggtaaccgt gatggggttg tcaccgtggt
      601 cgccagagac ctgtgtcccc gacacggcac cagtaggagc ttcgatggta cggtcgacgt
      661 gcgttccaga cggcgcggcc ggcgcatggc cgacggacgc cagcgattga ccggaaacat
      721 cgaaggcgtg gggctgactc tcatcggttt ggcccgaaac cgcaattgga ttggtgtcgc
      781 cggccgcctg attgacgcgc tccgcagaag ccctgacgat ggaactttcg acgaacggct
      841 cgttagaatt gacggacggc cccgtgctgg ttcggtccgc gaggccgttg cctacttcga
      901 catctgtgcg cgtgccatag tggaggttcg gattggtaag atcgtagcca ttcgggttgt
      961 cgccgtcctt cgccgcgccg tgctgcacag cctccgaatt tttcgcgggc ctgacttccg
     1021 aacgcccgaa cagatttgag agcgccttgt cggcgttgga gcgtgcacct gcagccgctt
     1081 gctcactggc cgcaacatcg acactcgaca taataaccgc ctccgcctgc cgaattgctt
     1141 tgaaggacgt gtcgggcacg tctcggcatc gagatcaagc catagcgcag aggtattaaa
     1201 tcaacgccta tcgatatccg acataatcac gggagcgcct taactattgc gattgtcgat
     1261 ccattaccgg catcttaacg gggtgctaaa catttccaat caatgatccc gagcaaccgg
     1321 acaccatgac agagatgacg ccgctgtggg gcctacaaaa ttcatgccca ctcttgtctc
     1381 gctgtcgagt cggcttttcg ccatcggccc atggaaagcc gcggctcggc gaccaatcag
     1441 cgtcgtatcc gtcgttaacg gtaagcgcat tcacgaacca acttttccgc tgccggtcta
     1501 tttcgcctca ttagccatca atctgctggc cttggcgatg cctctgtcga tcatgcaagt
     1561 ctatgatcga atcatcccca accattcttt gggaacgttg gcattgctgt ttttcggtct
     1621 ggcgctcgcg ctcattatcg aattcgttct aaaggtcatg cgctcggcgt tgttgtgttg
     1681 gcaaaccaag tgtttcgttc gggataccga aaatgaggcg attgcccgcg ttctaagggc
     1741 accggagagc gaattcgaac accggccggc tgccgtgcac atgaatcgct atgccgcggt
     1801 gtcggccctc ggcgattatc actgcggcgc agcccggctg gtttccattg atctgccgtt
     1861 cgtcgccatc ggtctaaccg tcatgagcac tgtcggtggc atcatggttt ttgttccgat
     1921 aggtttattt ttcgtttttt ccacactggc gatgcatcgc agccgcaaat tacgcgacgt
     1981 ccttcatgat cgtgctgcgc aggataacag aaaatacgac ttcatagccg aggttctggg
     2041 aggcattcat accgtcaaga tcttggccct ggaaccgcag atgcaacgcc gcttcgagcg
     2101 tctgcaacaa gcggtcgccg agacgacgat gtcatcgatt ttgaccggac aggcggcgca
     2161 gacatccgcg ctcctctatg gcagcatctc gcagctgatc gtggtggcca tcggagccac
     2221 ccgtgtcatc gataaccaat tgtcgatggg cgccctggcg tgctgcacaa tgctctccgg
     2281 acaaatcctt cagcctttgc tcggtgccat ttcccaatgg atggagaacg aaaccttata
     2341 ccagcgtcgc caggaagtcc gcgaattgct cgatatgcgg gagcttgaag tagcatcccc
     2401 ggaatgccgc agcatcaggg gcgacattag ttttgagaat gtcactttcg catatgatgc
     2461 ggccgccgca tccattctgc acaccatcga tttttccgtc accgccggcg aaattatcgg
     2521 aatcaaggga gaagacgggt ccggacgaac aacgctcatc aatctcttgc tcggggaaat
     2581 caaacccgta tcgggccgcg taatggtcga tgagatttcg accgtcgcgc cggaattctt
     2641 atcgttacgc cgacacatga tcacggttag gggggctccg gttatattcc gtggtacaat
     2701 catggaaaat ctcacggtct tccgtccgga gcggcgtgag cgtgcgcgta aaatgacgcg
     2761 gctcttcggc ctcgacgcct cgatcaatct catgcccgac ggatttgaaa cacgtctggg
     2821 cgaagcactc gccgacgacc tgccaatttc aatcgcgcaa caactcaata ttgtccgggc
     2881 gctgacgtcc aaccccaaaa tcctggtgct tgacgaagcg aatgcggcct tggacgtcat
     2941 cgccgaggca gctttgatac gcgccatcga tagcctccgc ggacatctga cgattatcat
     3001 tgtcactcat cgtccgtccc tcctggctcg agccgatcgc gtgcttgtgg ttcgcaaggg
     3061 tcgcgttggg tgggaaacgt ccgcaccgga tagcagtgtc agggcgagtt agcgctgatg
     3121 acgaattcga atgctccttg gtctgacgac gcagagaagc tacgagcggc atttgaacca
     3181 tcgtcgaatc cagtgcatgc caacttggcg cgtgtcgccg aggcatttgc gactgagccg
     3241 gatgacacgg tgcatcgaag cgagacttcg ctactagccg taatcgattc ggtggtacgg
     3301 ccgcgaacgc ctgctgaaac ttgtctcgcg ccgacgctcg cgttgctcgg atgggccggt
     3361 gaagcccggc acatccgcga agcactgccg catttcgaca ctatcaatga ttgcgaaggg
     3421 ctgtgcagcg tacttgcgcg gctatcgtac cgcgcgactc gaaataccgc aaaactttcc
     3481 gaacttcgcg ccgaagctct gccgtgcctg ttctcccgcg aaggaactga cgtcgttctc
     3541 gttgtcgatc gggaatctga tggccgccta cttatcttcg atggagcaag taagggctgg
     3601 cgattcgtag aaccggacaa ccagagcggt tgggcctatc gcattttggc gttatccacg
     3661 gaagatgagg ccgaggggcc aggaaaatcg tggctactgt cggcaattct gcgattcaaa
     3721 ccagtcgtca ccgccgcctt ggtgctgagc ttttttggaa atcttgccgc gctgacggtg
     3781 cctattttcg tcatgtacgt ttacgacctc gggatcggag caaaatcaac gtcggtcgtc
     3841 atcctgcttg gggtcggggc cagcatcgtt atcgcaacca acttcgcatt ccgtcaaatt
     3901 cgtgcatatg ccatggcgta ttttggtgct cgtattgacg cgctgattgg catgggcgca
     3961 ttcgaacgtc ttcttcaatt accaattgcg atgatcgaga gcgcgccgat aggcgtgcag
     4021 atgtcgcggc tcaaacagtt cgaaagcgtc cgcaacactt tcaccagcac cttggcgaca
     4081 tcgatcatcg acattccatt cattttcatt tttttggtcg ccatcgctta ctggggcggg
     4141 ctcctggtgt gggttccggt atcgctgatc atcctgtata cggcgctctc ggccgttacc
     4201 attccaatga cgcgcaatta cgttgtcgcg gtcggcagca cgaagcagcg cgtcgacctc
     4261 ttgttacacg aaatctttgc caagcgacgc gccatacgag ctcttggcgc agaggaaatc
     4321 tggatcgctc ggcaccgcga atgcgtcgaa atgctgacgc gacagaatta tcaggcgcag
     4381 cgcttcaatc acatcgtgca gaatttgggt caaacgctcg tcagtatcgc cggaatcgcc
     4441 acgctggcac tggggactct ccgggtcacc ggcggttcga tgacatctgg ctcgcttatc
     4501 ggggtgatgg cgctggtatg gcgggtgctg tcaccgctcc agtcaacgta tctgtcggtg
     4561 ccgcgtctgg tccaagccat acagaccttc cggcaagtcg atcgcctgat gaagatccgc
     4621 ggcgagcgaa atacccatac gccgcagacg tttcaccgcc gtttcaaagg acaaatttcg
     4681 ctgcaacgga tcgtgttcag gtatcctcaa cgatccgagc cggtctttcg cggaattcaa
     4741 ctggacatca agcccggtca gatgatcgcg gtcaccggag cgagcggagc cggaaagaca
     4801 acgttgcttc gactcatcgc ggggctttat ccaccaattg ctggtgccgt cttaatcgac
     4861 gacctggact tgcggcaaat cgatccggca gaatggcgat ccgagatcgc ctttctgccc
     4921 gaaaaggcga cgttctttta cggcacactg gcgcagaata ttcgacttgc ccgcccg
//
LOCUS       DATILV010000609         1633 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4488855, whole genome shotgun sequence.
ACCESSION   DATILV010000609 DATILV010000000
VERSION     DATILV010000609.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1633
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4488855"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..456)
                     /locus_tag="VLJ17_14185"
     CDS             complement(<1..456)
                     /locus_tag="VLJ17_14185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="GlxA family transcriptional regulator"
                     /protein_id="HSV24161.1"
                     /translation="MTGIAAHEIGIVDYPGAQVACILGLTDLFGVASTIALDQRRSGQ
                     SALRVTHWKPIHCGAAKLSCVYDSAPRGSPKPRTLIIPPTMVNLPDPDVPAGVVSWVR
                     NRHAAGATLVSLCSGAFILAETGLVDGLSVATHQICAEALAKRFPQIVVD"
     gene            608..1066
                     /locus_tag="VLJ17_14190"
     CDS             608..1066
                     /locus_tag="VLJ17_14190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007606767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HSV24162.1"
                     /translation="MRLTVNEQERVLEGVDPDMPLLWAIRDLLGLKGTKFGCGKALCG
                     ACTVHLDGQPVRSCQTFLADVGDGKVTTIEAISGPVAEAVKSAWIKNNVPQCGYCQSG
                     QIMSAVALLESNPKPSRDDVNSAMSGNICRCGTYPRIRAAIADASKHLGQ"
     gene            1080..>1633
                     /locus_tag="VLJ17_14195"
     CDS             1080..>1633
                     /locus_tag="VLJ17_14195"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSV24163.1"
                     /translation="MNTVETSSGREIVGGTSRRGFLEGIGTTAFLLAFQLPVSPGRAG
                     EPSGVSGQFNAFLAIGEDDVVTAIIAQTEGGQGNSTGMTQVIAAELGAAWPRMRYRFT
                     TERRPEYINPMLYEGLVLTAGSSSIPGFYDAMRRAAAATREMLVAAAAKQLGVSPSDL
                     SVSESKVIHSHSSRYLTFGQLAAAA"
BASE COUNT          340 a          486 c          509 g          298 t
ORIGIN      
        1 atcgacgacg atttgcggaa aacgcttcgc cagcgcctct gcgcaaatct gatgtgtggc
       61 aactgaaagg ccgtcgacga ggcccgtttc ggcaaggata aacgcacccg agcacagaga
      121 aaccaacgtg gcaccggcgg catggcgatt acgaacccag gacaccacgc cggcggggac
      181 gtcaggatct ggaaggttca ccatggtcgg cgggatgatc agcgtccgcg gctttgggct
      241 gccgcgcggt gcgctgtcat agacgcatga aagtttcgcg gcgccgcaat ggatcggttt
      301 ccagtgcgta acgcgaagcg cgctttggcc agatcgccgt tgatcgagcg caatcgtgga
      361 agcgacgccg aacaaatcgg taaggcccag gatacaggcc acctgcgcgc cagggtaatc
      421 cacgatgcca atttcgtgtg cggcgattcc agtcatcgca ttgtccctcc cggtcagaac
      481 tttgaccctt ccggcaattg aaaccgccga gggggcggaa gcaccttagc ataatcagtg
      541 aataccgtct ccgtgctcga ttggatccgg attgcgacca catggacggc aaggaaggct
      601 gcgagcgatg aggctcacgg tgaacgaaca ggagcgggtc ttggaggggg tcgaccccga
      661 catgcccctg ctctgggcta ttcgagatct cctaggtctc aaaggaacga aattcggctg
      721 tggaaaggcg ctctgcggtg cgtgcaccgt gcacttggat ggccagcctg tccgctcgtg
      781 ccaaacattt cttgccgacg tcggggacgg caaggtcacg acgatcgaag caatctccgg
      841 acccgttgcg gaagcggtca agtcagcctg gatcaagaac aatgtgcccc aatgtggcta
      901 ctgccagtcg ggtcagatca tgtctgcggt agcgttgctc gagtccaacc cgaagccctc
      961 gcgtgatgac gtcaactccg caatgagcgg caacatctgt cgatgcggca cctatccgcg
     1021 gatccgcgcc gcgatcgcgg acgcctcgaa gcatctcggt caatagcgag cgtgcggcca
     1081 tgaacaccgt cgagaccagc tctggccgcg agatagtcgg gggaactagc cgccgcggct
     1141 tccttgaggg gatcggtacg accgcttttc tcctcgcttt ccaactaccg gttagccccg
     1201 gacgcgcggg tgaaccgtca ggggtctccg ggcaattcaa cgccttcctt gctatcggtg
     1261 aggacgatgt cgtcacggcg atcattgcgc aaaccgaggg tggtcagggg aactcgaccg
     1321 gtatgaccca ggtcatcgct gccgagttgg gagccgcttg gccgcgaatg cgataccggt
     1381 tcactacgga acgacggcca gaatacatca atccgatgct ctacgaaggg ctcgtcttga
     1441 ccgccgggag ctcttcgatc ccaggcttct atgacgcaat gcgccgagcc gcagcggcga
     1501 cgcgggagat gctcgtcgcc gcagcggcga agcaattggg ggtcagtccg agcgacttat
     1561 ccgtgtcgga atccaaagtg atacactcgc actccagccg ctatctcaca ttcggacaac
     1621 tggcggcggc tgc
//
LOCUS       DATILV010000610         8335 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_916575, whole genome shotgun sequence.
ACCESSION   DATILV010000610 DATILV010000000
VERSION     DATILV010000610.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8335)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8335)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8335
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_916575"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..234
                     /locus_tag="VLJ17_14200"
     CDS             <1..234
                     /locus_tag="VLJ17_14200"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSV24164.1"
                     /translation="ELYLRPEFQGLGFGRRLFTAARRDLAQSGIKSLVVWALSDNTTA
                     VSFYRALHGQPVARSCEKFGKKTLDKIAYAWQA"
     gene            complement(339..1223)
                     /gene="folD"
                     /locus_tag="VLJ17_14205"
     CDS             complement(339..1223)
                     /gene="folD"
                     /locus_tag="VLJ17_14205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004488 - methylenetetrahydrofolate
                     dehydrogenase (NADP+) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HSV24165.1"
                     /translation="MTAKLIDGKAVAAELRAKVAGEVQRFATAFGVSPGLAVVLVGDN
                     PASEAYVGSKKKMALQTGIQSFDHRLPGSTDEVELLALIARLNSDPAIHGILVQLPLP
                     PHIDAYHVLTAVDPTKDVDGFHPANVGRLAIGLPTLVPCTPLGCIMLANSVHPSLAGL
                     EAVIVGRSNIVGKPLAQLLIGQNATVTVAHSKTRDLPAVCRRGDLVVAATGRPGLVRG
                     DWIKPGATVIDVGINRVASEDGRHRIVGDVAFAEVCEVAGAITPVPGGVGPMTIACLL
                     ANTVKAACMSAGLPAPES"
     gene            complement(1220..1552)
                     /locus_tag="VLJ17_14210"
     CDS             complement(1220..1552)
                     /locus_tag="VLJ17_14210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF167 family protein"
                     /protein_id="HSV24166.1"
                     /translation="MDAGERPWAACAEGLVVTVRLTPRAGRDSIDGIVHLSDGRSVLK
                     ARVSAAPSDGEANSALARLLAQALHMAPRDIALVGGATSRNKRMLVKGDARAIATVLE
                     QIGEAAAK"
     gene            complement(1555..1845)
                     /locus_tag="VLJ17_14215"
     CDS             complement(1555..1845)
                     /locus_tag="VLJ17_14215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020084093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HSV24167.1"
                     /translation="MLELLRFINFLLDIYIFILFAAAILSWLVVFNVVNTRNQAVAMI
                     ADFLYRVTEPVLRPIRNRLPNFGGIDISFIVLILIIYFIQWVILPNLAKAFY"
     gene            2050..2817
                     /locus_tag="VLJ17_14220"
     CDS             2050..2817
                     /locus_tag="VLJ17_14220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008143996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate transporter family protein"
                     /protein_id="HSV24168.1"
                     /translation="MLEAVFKALGQMFSRPFRTVLLKSVGLAIAFLIVVVTVLFRLME
                     WLSGAGTKWLEVTIGPAAHGPLAVLGWIVAFALGFGLFTGAVLLMPAVTALVASFFAD
                     EIADLVERSHYPADPPGVPLSLWLAAVEGAKTALLATAVYLCALPFLLFAGAGALLFF
                     LATAWLLSREYFQLAAMRFHPAADAKALRRRHSAAVFTAGLFIAGFVSIPILNLATPL
                     FGTALMVHMYKRLIGGAQRALTEAKPGPMALHSDPTP"
     gene            complement(2825..4693)
                     /locus_tag="VLJ17_14225"
     CDS             complement(2825..4693)
                     /locus_tag="VLJ17_14225"
                     /inference="COORDINATES: protein motif:HMM:NF024795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hint domain-containing protein"
                     /protein_id="HSV24169.1"
                     /translation="MSGIDDDNLLLTATLAGDNTLIAGNGNSDTLDAHGSSGNNILIA
                     GGGAVDLLNASSTSGNNILIAGNGNSDTLTVSSSHGSNTLKAGDGISDLLDASVSSGD
                     NFLIAGNGDGDVLTVASSNGDNVLTAGNGDNDVLDASNSTGNNTLIAGNGNGDMLFAG
                     WGRNALQGGSGDDTFIVQGPVGAGTTIAGGAGTNILQAAADISHILISNVQTLDVRGA
                     VTLTAAQLDEFSTIQSSAFFPNIIAATGGIYSLAGKAVDAINLNLTAQSSDGTTLIGN
                     DTAGVVLTASAAGNDNLTAGNGGDTLNAGGGNDTLLGGSGDDTLNAGTGDAFMQGNGG
                     NDAYNFANASTDGNYIINNFHADAGQSVIQFGDGVTADQIVASRSGDDLVLTIGEDPI
                     TIQNYFSSSEFQVSNLQFVGDETPVDLANLADPLLCFLAGTRVRTPLGEMPVEELKRG
                     DLVLTTQGCAMPVCWIGRQTVSTTFADPLRVLPIRIKAGALGFHVPSRDLLLSPDHAV
                     LVGDILIQAGALVNGTSIVRETNVPTTLSYYHIELDDHSLILAENTPAETFVDNVDRL
                     AFDNWDEYEALYPGGRSVEEMPHPRAKAHRQVPPDVRAMLGARAALIGNAVEPVAA"
     gene            complement(4948..5706)
                     /gene="nth"
                     /locus_tag="VLJ17_14230"
     CDS             complement(4948..5706)
                     /gene="nth"
                     /locus_tag="VLJ17_14230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HSV24170.1"
                     /translation="MGRKTNPAATKSKLKTKAISPPTSKSAARPKSKVFKSRPWTAAE
                     IEEAFRRFRAANPEPLGELHYVNPYTLLVAVVLSAQATDAGVNKATPALFAAADTPEK
                     MVALGEDKVRDLIRTIGLFRTKAKNVIALSEKLIAEHGGLVPPVREALEALPGVGRKT
                     ANVVLNIAFGAETIAVDTHIFRVGNRTGLAPGKTPFEVEMTLEERVPAAYRRHAHHWL
                     ILHGRYSCKAQRPLCEKCLINDLCRWPEKTTFMG"
     gene            5729..6256
                     /locus_tag="VLJ17_14235"
     CDS             5729..6256
                     /locus_tag="VLJ17_14235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2244 domain-containing protein"
                     /protein_id="HSV24171.1"
                     /translation="MRRRNGPRNESIEPEPALFSAVVTPHRSLNGVGFLIVMAAVGGI
                     SFAAGLVFLLLGAWPVFGFFGLDVLLIYWAFRANYRAAAAFEEVTVTASELRVRKVSH
                     RGKTSEWSFNPLWVRLDRESHEEFGIERLFLVSHGRRLPIASLLGPQEKEGFAAALGA
                     AIGAAKRGPTRTVLE"
     gene            6350..7231
                     /locus_tag="VLJ17_14240"
     CDS             6350..7231
                     /locus_tag="VLJ17_14240"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HSV24172.1"
                     /translation="MISPDPQPAKPTADRSNDDYAVVRCAVAFISERWRAQPDIEAIA
                     HACGVTPDELHHLFRRWAGLTPKAFVAAITLDHARKLLRDSASVLDATYAVGLSGPGR
                     LHDLFVTHEAMSPGEWKAGGEGLTLAYGFHPSPFGDALVVVTGRGLAGLAFADPDEKL
                     AALDDMRRRWPRAQFCEDPSRTAPLARRIFDLKLWQRDRPLQVVMIGTDFEVRVWETL
                     LKVPMGRATTYSDIATKIRAPKAVRAVGAAVGKNPIAFVVPCHRVIGKSGDLTGYHWG
                     LTRKRAMLGWEAGRVGA"
     gene            7452..>8335
                     /gene="gpmI"
                     /locus_tag="VLJ17_14245"
     CDS             7452..>8335
                     /gene="gpmI"
                     /locus_tag="VLJ17_14245"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020091178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046537 -
                     2,3-bisphosphoglycerate-independent phosphoglycerate
                     mutase activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HSV24173.1"
                     /translation="MLVIMDGWGWREDPADNAVRQARTPAFDHLWATCPHALLHTSGK
                     DVGLPPGQMGNSEVGHLNIGAGRIVMQDLPRISEAIASGDIGRAPALLKLIDQLQQSG
                     GTCHLMGLISPGGVHSHQDHAVALASLLANANVPTVVHAFTDGRDTPPQMADKYVDDL
                     NKALPPSVPIVTVCGRYYAMDRDNRWNRVASAYNAIMEAEGAHFPNARSAIAEAYSRD
                     IGDEFIPAAVIGSYGGMRDGDGVLCFNFRADRVREILSAVLDPGFSAFPRRRTVRFSF
                     AVGMTQYSEELNAFMQPL"
BASE COUNT         1573 a         2545 c         2491 g         1726 t
ORIGIN      
        1 gagctgtacc tgcgcccgga gttccaaggt ctcggtttcg gacggcgcct gttcacggcg
       61 gcacgacgtg atctggcgca gagcggcatc aagagcttag tggtgtgggc cttgtcggat
      121 aacaccacag cggtttcatt ctaccgcgca cttcacgggc agccggttgc acggtcatgc
      181 gagaagttcg gcaagaagac actcgataag attgcctatg cttggcaggc atgaacttga
      241 tcagttcatc gaaagaaaag caccttgcga agtgataggt gcgcaagcct gcatatgacg
      301 tttatcgttt cggaatacgc ttaaagccta taacgctgtc acgattccgg cgccggaagt
      361 ccagccgaca tgcaggcggc cttcaccgtg ttcgcgagca agcatgcgat cgtcatgggg
      421 ccgaccccgc ccggaaccgg cgtaatggcg cccgcgactt cgcatacctc tgcgaaagcc
      481 acgtcgccca cgatgcggtg ccggccgtct tcgctggcaa cccggttaat gccaacatcg
      541 atcactgttg cgccaggctt gatccaatca ccgcgcacca gcccggggcg accggttgcc
      601 gccacgacga ggtctccccg tcggcatacc gccggcagat cccgggtttt cgaatgcgcc
      661 accgttacgg tcgcgttttg cccaataagc aactgggcca gcggcttgcc gacgatgtta
      721 gaacggccga cgatgaccgc ctccaagccg gcgagtgagg gatgtacgct gttggctagc
      781 atgatgcacc caagcggcgt gcacggcacc aacgtgggca gccctattgc gagccggccc
      841 acattcgccg ggtgaaatcc atcgacgtcc ttggtcggat cgaccgccgt aagcacgtga
      901 taagcatcga tgtggggcgg caggggcaat tgcaccagaa tgccatgtat tgctggatcg
      961 ctgttgagcc gtgcgatcag ggccagtaat tcgacttcgt cggtgctacc gggcagccga
     1021 tggtcgaatg actgaatgcc ggtttgcagc gccatcttct ttttgctgcc aacataagct
     1081 tcactggccg gattgtcgcc caccagcacc accgcgaggc ccggactgac accaaacgcg
     1141 gtcgcaaatc gttgcacctc cccggcgacc ttggcgcgca gttcggccgc cacggccttt
     1201 ccgtcgatca gcttcgcggt cattttgccg cggcctcgcc aatttgctcc agcaccgtcg
     1261 cgatagcgcg ggcatcaccc ttgactagca ttcgcttgtt gcgggaagtt gcacccccaa
     1321 ccaatgcgat gtcgcgcggc gccatatgga gcgcttgcgc cagcaagcgc gcgagcgcgc
     1381 tgttcgcctc accgtcgctt ggcgctgcac tcacccgtgc cttcaacacg ctgcgtccgt
     1441 cggacagatg cacgatgccg tcgatcgaat cgcgaccagc tctgggggtg aggcgcaccg
     1501 taacgactag cccttcggca catgccgccc acggcctttc gcctgcatcc atcgctaata
     1561 gaaggccttg gccaagttgg ggaggatgac ccactggatg aagtagatga tcagaatgag
     1621 cacgatgaag gaaatgtcga tgccgccgaa attcggcagc cgattgcgga tcggtcgcag
     1681 caccggctcg gtgacccgat aaaggaagtc ggcgatcatc gcgaccgcct gattgcgggt
     1741 attgacgacg ttgaacacga caagccaact caggatcgcc gccgcaaata gaataaaaat
     1801 gtagatgtcg agcaggaagt tgatgaatcg aagaagttcg agcatagctc gggatccgtt
     1861 ttcgttgggc gggcgcggta acatctaccg atccgcggcg aggcaggcaa ggggcttccg
     1921 tccgaagggg tttgcgcctg aagcgagcac gtgagatcac attggggtgt ccaaaccgtt
     1981 ttggatcctt gcatttttcc agccggcttt cccgaggcaa ttcgctgtcc ggctgtgctc
     2041 ggaggtcaga tgcttgaagc ggtcttcaag gcgctcggcc aaatgttctc gcggccgttc
     2101 cgtaccgtcc tgctcaagtc cgtggggctg gcaattgcgt tcctgattgt cgtcgtcact
     2161 gtgctgttcc gcctcatgga atggctttca ggcgcgggca cgaaatggct cgaagtgacg
     2221 atcgggccag cggcccatgg tcccctcgcg gtgctgggct ggatcgtcgc ctttgctctg
     2281 gggttcggac tcttcaccgg cgcggtgctg ctgatgcccg ccgtgaccgc cctggtggca
     2341 agcttcttcg ccgacgaaat cgccgacctc gtcgagcgaa gccattatcc ggccgatccg
     2401 cccggagtgc ccctgtcgtt atggctcgcc gccgtcgagg gcgcgaagac cgcactgctg
     2461 gcgacggcag tctacctttg cgccctacca tttctgctgt tcgcgggggc cggagccctg
     2521 ctgttctttc tcgccaccgc atggttgctg agccgcgaat atttccagct tgcggccatg
     2581 cgtttccatc cggcggcgga cgccaaggcg ttgcgccgca ggcatagcgc ggctgttttc
     2641 accgcgggtc tgttcattgc gggattcgtt tcaatcccga tcctcaatct ggcaaccccg
     2701 ctgttcggta ccgccctaat ggtgcacatg tacaagcggc ttatcggtgg tgcccagcgt
     2761 gctttgaccg aggcaaagcc ggggccaatg gcgctgcata gcgaccctac cccatagggc
     2821 ggatttacgc cgcaacaggc tcgacagcgt tcccaattag ggccgcgcgc gcacccagca
     2881 tggcgcgcac gtctggcggc acctggcggt gcgccttggc acgcggatgg ggcatctcct
     2941 cgaccgagcg gccgccagga tagagtgctt cgtactcatc ccagttgtcg aacgccagcc
     3001 ggtccacgtt gtccacgaag gtctccgccg gggtgttctc ggcaagtatc agcgaatgat
     3061 cgtcaagttc gatgtggtag taagacaatg ttgtcgggac gttggtctcg cgcacgatcg
     3121 acgtgccgtt caccagtgca cctgcctgga tgagaatgtc accaacgaga accgcgtgat
     3181 ctggcgaaag caacaaatcg cgcgatggaa catgaaaccc aagtgcgccc gccttgatgc
     3241 ggattggcag cacgcgcagc gggtccgcga aggtcgtgga aacggtctgc cgaccgatcc
     3301 agcaaaccgg catggcgcag ccctgtgttg tcaggaccaa atcaccgcgc ttgagttcct
     3361 cgaccggcat ttctcccagc ggcgttcgca cacgcgtgcc ggcaaggaaa cacagaagag
     3421 gatccgcgag gttcgcgagg tccactggcg tttcatcgcc aacaaattga agattggaaa
     3481 cttggaattc agaactcgaa aaataatttt gaattgtgat tgggtcttcg ccaatcgtca
     3541 gcacgaggtc atcgccggag cggctcgcca caatttggtc ggccgtgacg ccgtcgccaa
     3601 attgaatcac cgactggccc gcatccgcgt ggaagttgtt gatgatataa ttgccgtcgg
     3661 tgctggcgtt ggcaaagtta taggcgtcgt tgccgccgtt gccctgcatg aaggcgtcgc
     3721 cagtaccggc gttaagcgta tcgtcccccg agccgccaag caacgtatcg ttacccccgc
     3781 cggcgttgag agtgtcgccg ccgttgccgg ctgtgagatt gtcattaccc gctgcgctag
     3841 ccgtcagcac cacgccggcc gtatcgttgc cgatcaacgt cgtgccatcc gaggattggg
     3901 ccgtcaaatt caaattgatg gcgtcaacgg ccttgccggc aagggagtaa attccccccg
     3961 tcgcggcgat aatattagga aaaaatgcag agctttgtat cgtgctgaac tcatcaagct
     4021 gggccgccgt caaggtgacc gcgccgcgca catccagcgt ttgaacattg gagatcaata
     4081 tgtggctgat gtcagccgca gcttgcaaga tattggttcc ggcgccgccc gcgattgtgg
     4141 tgccggcgcc aactggcccc tggactatga acgtatcgtc gcccgagcca ccttgcaggg
     4201 cattgcggcc ccagccggca aagagcatat cgccgttgcc gttgccggca atcagggtgt
     4261 tgttgccggt gctgttcgat gcgtccagga catcattatc gccgttgcca gccgtcaata
     4321 cattatcgcc gttgctggag gccacagtca gcacatcgcc gtcgccgtta cccgcgatca
     4381 ggaagttgtc gccgctggat acactggcat ccaacaggtc gctgatacca tcaccagctt
     4441 tcaacgtgtt gctgccgtga ctgctgctca cggtcaacgt atcgctattg ccgttgcctg
     4501 cgatcaatat gttgttgccg ctggttgagc tggcattcag gaggtcgaca gcaccaccac
     4561 cggcgattaa aatattgttg cctgaactgc cgtgggcatc cagtgtatca ctgtttccat
     4621 ttccggctat cagagtattg tcgcccgcta gagttgctgt cagtagcaag ttatcgtcgt
     4681 cgatgccact caaagttgtg ccctcatgaa agttggcgtt cagattaaga tcatcggtac
     4741 tcgacgttgc cgagcccccg actaacgatg ttctggatat tcacaacgaa cgcgaaggca
     4801 gggcttggaa tggtgagcat tgccctgatt cgacttgtct gattatgtca acttagcgcc
     4861 tccttcaagt caaatttaca tccaaattgg ggggaagcta tgcagactgc ccagttaccc
     4921 ccaaatgact aaagcctcag tccctcgcta tcccataaat gtcgtctttt ccggccagcg
     4981 gcacaaatcg ttgatcaggc atttctcgca caatgggcgc tgtgccttgc agctgtaacg
     5041 tccgtgcagg atcaaccaat gatgagcgtg acgccgatag gccgcaggca cgcgctcttc
     5101 gagcgtcatc tcgacctcga acggagtctt gccgggcgcc agcccggtgc ggttaccgac
     5161 ccgaaaaatg tgggtatcga ccgcaatcgt ctcagccccg aacgcaatat tgagcaccac
     5221 attcgcggtc ttgcggccaa cgccgggcag cgcttcgagc gcctcgcgca ccggcggtac
     5281 caagccgcca tgttcggcaa tgagcttttc agacagcgcg attacgtttt ttgccttggt
     5341 gcggaataac ccgatagtcc tgatcaggtc gcgcactttg tcctcgccga gcgccaccat
     5401 cttttccggc gtatccgcgg cggcgaacag ggcaggcgtc gctttgttga cccccgcatc
     5461 ggtcgcctgt gcagacagca cgacggcaac cagcagcgta tagggattga cgtaatgcag
     5521 ttctccgagc ggttccggat tggcagcacg gaaccggcga aatgcctcct cgatctcggc
     5581 tgcggtccag ggcctcgact tgaaaacttt ggattttggt cgggccgctg acttcgatgt
     5641 gggcggcgaa atcgctttgg tcttcaactt cgatttcgtt gccgcaggat tggtttttcg
     5701 ccccatcttt ctcctataat gaatcttcat gaggcgacgc aatggccccc gtaacgagtc
     5761 catcgagccc gaaccggctc tcttctcggc cgtggtgact ccgcatcgtt ccctcaacgg
     5821 cgtcgggttt ttgatcgtca tggcggccgt ggggggcatt agtttcgccg ccgggttggt
     5881 gtttctgttg ctcggcgcgt ggccggtgtt cggcttcttc gggcttgatg tcctgctgat
     5941 ctactgggcg tttcgcgcca actaccgcgc cgccgccgct ttcgaggaag taaccgtgac
     6001 ggcgtccgag ctgcgcgtac gcaaggtcag ccatcgcggt aagacctccg agtggtcctt
     6061 caatccgctg tgggtgcggc tcgatcgcga aagccacgaa gaattcggca tcgaacggct
     6121 attcctggta tcccacggcc gccggctgcc aatcgcaagc ctgcttggtc cgcaggagaa
     6181 ggaaggcttt gcggccgccc ttggggcggc gatcggcgcg gccaaacgtg gccccacccg
     6241 gacggtgttg gagtagggcg ggcggcaccg cgccctcccg tgcagaaatc gggtggcgac
     6301 gacgggacgc attcgctaaa tcgcccgcat gaacatgtca tacgcaccca tgatttcacc
     6361 cgatccgcaa cccgcgaagc caacggccga tcgctccaat gacgactatg cggtggttcg
     6421 ctgcgccgtc gctttcatct cggagcgttg gcgcgctcag cccgacatcg aggcgatcgc
     6481 ccacgcctgc ggcgttacgc ccgacgagtt gcaccatctg ttccgccgct gggccggact
     6541 gacgcccaag gcgttcgtcg cggcgatcac gctcgatcac gcccgcaagc tgttacgcga
     6601 ctcggcaagc gtgctcgatg ccacctatgc ggtcggccta tcgggacccg ggcgcctgca
     6661 cgacctcttc gtcacccatg aggcgatgtc gccgggcgaa tggaaggccg gcggagaagg
     6721 tctcacgctc gcctacggct tccatccctc gccgttcggg gacgccctgg tggtggtgac
     6781 gggacggggg cttgctggac ttgccttcgc tgacccggat gagaaactag ctgcgctcga
     6841 cgacatgcga cggcgctggc cacgggcgca attctgtgag gacccctcac gcactgcccc
     6901 attggcccga cgcatcttcg atctgaaact atggcagcga gaccggccgc tgcaggtcgt
     6961 gatgatcggc accgatttcg aggtgcgggt gtgggagacc cttctgaaag ttccgatggg
     7021 ccgtgccacc acttattcgg acatcgcgac caaaattcgt gcccccaagg ccgttcgcgc
     7081 agtgggggct gccgtcggca aaaacccgat cgccttcgtg gtgccgtgcc atcgcgtcat
     7141 tggcaaaagt ggcgatctca ccggctatca ctggggtctg acccgcaagc gcgccatgtt
     7201 gggatgggaa gccggcaggg tcggggcgta ataaacttgg tagatggtca aatgtggaaa
     7261 aaatgcgccg tttatgtcaa tggaggaccg tcttctggtg acagtccaac cggtaagtcg
     7321 cgtagccacc cacggtgctt agcaggccgg taaagtgaac catccgtcgg aactcctcgg
     7381 ccaaggtgga attgctttgc aaggaccgct tggataatcc gaggatcgac atgcagaaat
     7441 atcgcccagt gatgctggtg atcatggatg gctggggctg gcgagaggac ccggccgaca
     7501 acgctgtccg tcaggcccgc acgccggcct tcgaccactt gtgggccact tgccctcacg
     7561 ccctccttca cacctccggc aaggatgtcg gtctcccgcc cgggcaaatg ggtaactccg
     7621 aggtcgggca cctgaacatt ggcgcaggcc gcattgtgat gcaggacttg ccgcgcatca
     7681 gcgaggccat tgccagcggc gacatcgggc gcgcacccgc gctgctgaag ttgattgacc
     7741 aactgcagca atccggcggc acgtgccacc tcatgggctt gatttcgccg ggcggtgtgc
     7801 attcacatca agatcacgcg gtggcactcg ccagccttct ggcgaacgcc aacgtgccaa
     7861 cagtggtgca cgcatttacc gacggacgcg acacaccacc gcaaatggca gacaagtatg
     7921 tcgacgacct gaataaagca ctgccgccgt ccgttccgat cgtcacggtc tgcggtcgtt
     7981 actatgccat ggaccgcgac aaccgttgga accgcgtagc gagtgcttac aacgccatta
     8041 tggaggccga aggcgcgcat ttccccaatg cccgttcggc aatcgcggag gcgtattcac
     8101 gtgatatcgg cgacgagttc atccctgcgg cggtcatcgg tagctacggc ggtatgcggg
     8161 acggtgacgg cgtgctttgt ttcaacttcc gcgccgaccg tgtgcgcgaa atcctcagcg
     8221 ccgtcctcga tccggggttt tccgctttcc cgcgtcgacg cacggttcgt ttttcattcg
     8281 cggtgggcat gacgcagtac agcgaagagc tgaacgcgtt catgcagccg ctctt
//
LOCUS       DATILV010000611         4796 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_916767, whole genome shotgun sequence.
ACCESSION   DATILV010000611 DATILV010000000
VERSION     DATILV010000611.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4796)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4796)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4796
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_916767"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(325..624)
                     /locus_tag="VLJ17_14250"
     CDS             complement(325..624)
                     /locus_tag="VLJ17_14250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24174.1"
                     /translation="MKPEQRRALEMLAGTPRGATKAVLIHGYGFAPHMLDDLIRDGLA
                     TDASERFLIGTNQIIVEVRRIRITDTGRQRLADYDGADDTKSRLSCADPGCGGNT"
     gene            complement(1117..1416)
                     /locus_tag="VLJ17_14255"
     CDS             complement(1117..1416)
                     /locus_tag="VLJ17_14255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24175.1"
                     /translation="MDKIPLSAEWRRALEMLVNAGERRGMTEAVLCARGFTPEMVRSL
                     VLCGLATASPQTLKIGNRSIEAVRLRITNAGRYVLMSQDRAAVAANRALEWNDKK"
     gene            complement(1725..1895)
                     /locus_tag="VLJ17_14260"
     CDS             complement(1725..1895)
                     /locus_tag="VLJ17_14260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24176.1"
                     /translation="MDSIDASVSANYGRVWSLKVLLFLMTLSPQLSIGSVSTLMEAAL
                     GLIIPFLVAGAP"
     gene            complement(2076..2450)
                     /gene="copC"
                     /locus_tag="VLJ17_14265"
     CDS             complement(2076..2450)
                     /gene="copC"
                     /locus_tag="VLJ17_14265"
                     /inference="COORDINATES: protein motif:HMM:NF016149.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_process: GO:0006825 - copper ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis periplasmic binding protein
                     CopC"
                     /protein_id="HSV24177.1"
                     /translation="MILQRAIIITMTSAALSLSGVVVAFAHAHLVRATPTEGGTVNSA
                     PSEVTLKFNEKLESAFSSAVVRDSAGKRVDKADAHVDKADRTVVRVSLPPLDPGVYTV
                     EWKAMSSDTHKINGNFNFRVGE"
     gene            complement(2939..3523)
                     /locus_tag="VLJ17_14270"
     CDS             complement(2939..3523)
                     /locus_tag="VLJ17_14270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24178.1"
                     /translation="MAERVAIGKRLEIGGHGEEITPIRMSPLMEFSNTGGLFAVGMDA
                     DIFRGRALQRAMDIQGSHEALRPNKIHVLHRRAFLAVGEKFGIRMRARPRYHRNTCVI
                     FSRHSVPQDNPPPVTTKSSQRNQPQVKMARKKYLMDIFSMLRKYHNKIFQRHKGPDWL
                     HYPNLDQRTFAASQARGSERLNQPVQGDVRRTRS"
     gene            4628..4768
                     /locus_tag="VLJ17_14275"
     CDS             4628..4768
                     /locus_tag="VLJ17_14275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24179.1"
                     /translation="MGAATADVASPPGVADELTPDPIPDRALDVADDLAVDIIVNYIQ
                     SG"
BASE COUNT          943 a         1385 c         1428 g         1040 t
ORIGIN      
        1 gcttgcagac ggatcggcga tgtttgctcg gccgctgcgg ctcgaagacg aacggctatt
       61 ttcgaaggac ggggagagcc aaaaccgccg gacagatatg gtccagtatc gcaccttatg
      121 atctgtatca gaaggcaccg catgatctgt atcggatggc accgccattg ccaccatatc
      181 ttgtcagtgc atcctggcgc ttatgggggt agccgtcggc aggggaagca gaccccggga
      241 cttgccattg cagggagcgg ggcttttctt caccacatcc cttttcctca ggtcccggaa
      301 gctcgacatt tagcgtcggt ccccttatgt gtttccgcca catccagggt cggcgcaaga
      361 cagtcgggat ttagtgtcgt cagcgccgtc gtagtcagcc aagcgctgcc gacctgtgtc
      421 ggtaatcctg atgcgtcgca cttcgacgat gatttgattc gtgccgatca ggaaacgttc
      481 ggatgcgtcc gtcgcgagcc catcgcggat caggtcgtct agcatgtgag gcgcgaagcc
      541 gtagccgtgt attagcacag ccttggtcgc gccgcgcggg gtgccggcaa gcatttcgag
      601 cgctcggcgc tgttcgggtt tcatgccggc agtatcggcc ggcgaccaag aagaacaata
      661 attggcgtgg acgcaggggc aaaatgacac ttggttgcgg cccccggtgt tggccccagg
      721 gtaattttcc ccatccgact gtagcgccgc gtccgtagca agggtggcgt tccatcggtc
      781 aacgactcgg gcggcgtcgt cctatcggtt gggtcgcgag gggagtgatt tttggaaatg
      841 gcagatttcc tgtcccgatg atatagtctg cgcagacgat tggtctgacc ctcgggtgta
      901 cgatacttga ttcacggggt cgctccccac atgtgcgatc aaggaactct tgcccattgt
      961 tggaccgagg ggccgggggt cgctcccccg gctacccagc gtctttacgc gcgtgagcca
     1021 acgtcctttc atttcagtgc cttgccgagc ctcggcgtga ttgatggcgc cttcgcggta
     1081 tggaaaaagg ccacgggggt tcagcggacc tgctgcttat tttttgtcat tccattcgag
     1141 cgcgcggttg gcggctaccg ccgcccggtc ctggctcata agtacatacc gtcctgcatt
     1201 cgttatcctc aatcgcacag cctcgatact ccggttcccg atcttgagag tctgcgggct
     1261 cgctgtcgcg agcccgcaga gcaccaagct tctcaccatc tccggcgtga agccacgggc
     1321 gcacagcaca gcttcggtca tgccgcgccg ctcacctgcg ttgaccagca tttcgagcgc
     1381 tcgacgccat tcggcgctga gcggaatttt gtccatcgcc accgattgat cttggtcggc
     1441 gacttgggag ccagcaaggc gtggcgtctc agcttagata ttttcaaatt cgaaagtgct
     1501 tgcaccgtgt cagtccgtca tcgcgtttgg catcactacg ctaccagcgc aaccgcgggc
     1561 gacctggcga tcactgggat cggcgccaat cctggtacca cgagcaacgc cgccccagca
     1621 ccaagcttcc cacgacgcga gcgggtggta gtcgagtatg cggacatcga ttgtgcggct
     1681 ggccctgcag ccggggcggc aaatacctcc tcactagcgc ctgttcatgg agcgccggcg
     1741 accaggaaag gaatgatcag ccccaacgcc gcttccatca gagttgagac ggagccgatt
     1801 gaaagctgcg gtgagagcgt catgagaaac agcagcactt tcaatgacca cacgcggccg
     1861 tagtttgcgc tgaccgaagc atcgatgctg tccacgagaa actagctatt gacgactccg
     1921 gttgcgacta gtgtggctac gcagacgatc ccgaggaccg aaaatcgcgg ccttgccgtg
     1981 cgggcaatcc tgatccgcag cgccctcgat atctgagttc gccgctgcgt gacctgaaaa
     2041 cccccatcga ccagcttggt tacggcgtgg ccgcgctatt ccccgacccg aaagttgaaa
     2101 ttgccgttga tcttgtgggt atcagatgac attgccttcc attccacggt gtagacgccc
     2161 gggtccagtg gcggcagcga aacccttacg accgttcggt ccgctttgtc gacgtgcgcg
     2221 tcggctttgt cgacccgctt gcccgccgaa tcacggacga cggcagaact aaatgccgac
     2281 tccagttttt cattgaattt gagcgtgact tcgcttggcg ccgagttgac cgtgccgcct
     2341 tccgtcgggg ttgcgcgaac gagatgggcg tgagcgaacg ccacaacaac tcctgacaag
     2401 gatagcgcgg cggacgtcat ggtaatgatg attgcacgct ggagtatcat agcgggtctc
     2461 ctgggcttgt tcaggcggtg tagccactgg ggcatgcgag agcaccgccg ttgtcgatcc
     2521 ggccgttcgc ggtcacaagc aatctcgcgt cggctaccag agatgttcgg aaaaatgcgt
     2581 tcgtcacgaa ggaaagaagc ataacatgtg tatgggagtg actgcaaagg gctgaaacga
     2641 cccttgctcg ccaaacttac aagactcgcg taggacatcg tgacaaccgc gcttaatctg
     2701 aagggcaagt tggtcatgta aacccggccc accaacatcc ggcaaaaagg cttttcgact
     2761 acctcggcat caatccagac cgctgtagta aacgatccgc gacgaagtca aaatctccgg
     2821 caccgatgcc ttgcagccgc caagggcttt gccgctgata tccctttgtc cttcagcttg
     2881 cgagagggta gggaatgagc agcactgtcc ggctgacgat gcatcagccg ggggccgctc
     2941 atgaacgcgt tctacgaaca tcaccctgaa cgggctgatt cagccgttca gagcctcgcg
     3001 cttggctcgc ggcgaaggtc ctttgatcaa ggttcggata atgaagccaa tctgggcctt
     3061 tgtgtctttg aaatattttg ttgtgatatt tccgcaacat cgagaaaatg tccattaaat
     3121 attttttgcg ggccatcttg acttgtggtt ggttcctttg gcttgatttc gtggtaacgg
     3181 gcggcggatt atcctgggga acgctatgac ggctgaagat gacacatgtg ttgcggtgat
     3241 aacggggcct ggcgcgcatt cgtatgccga atttctcgcc aactgcgaga aatgcgcggc
     3301 ggtggaggac atgtatcttg tttgggcgca gggcttcatg gctgccttga atatccatcg
     3361 cgcgttgcag ggcgcgcccg cgaaaaatgt ccgcgtccat gccgacggcg aacaggccgc
     3421 ccgtattcga gaactccatg agcggcgaca tccggatggg ggttatttct tcgccgtggc
     3481 cgcctatttc aagtcgcttc ccgattgcta cgcgctctgc cattgagccg ccttatcgcc
     3541 gcgccgaagt cggcgctacc atcagtcgat agaacaagcc tggaggacgg cggtggccag
     3601 gactcttgct gcggcgggtg ttctcttgat tgtggcgact cgtgcgccag ccccagctca
     3661 gagatgtgtt ggagaggatt gcaaaaagga tcggcttcca caggcgcagg gtggcaatca
     3721 gcaaaccgtt ctatccccgc cctgggcctc agcaccagta ttatccgcag cccagttacc
     3781 cacgtcaggg atcatctcag caacagcagg gttacccgcc tcaggggtat cggcagccga
     3841 gttcccccca acagatctac ccgcagcagg tttatccgct gcaagtttac ccactggtgg
     3901 ggctttgtgt ggtcactgac ctgggtacct gtccggtgtt tgccgctcca ggctcttact
     3961 gcgaatgcag gagtgatttt ggggaggttt ttagcggcgt cgttcagtag tgtctaaatc
     4021 ccggaactcg accgcctggg ctggaatcga ccctcatccc caggcctgtt tgtccacttt
     4081 tagcgcacag aagtccgcat ttgaccgcgc ggcatcaaga tcgaagacaa ggcggcgatt
     4141 aggaaacggc ttcgccgctc gccgaacgcg atcgtgatgg cattgagcga aggcgcaaag
     4201 gcggctgcag cggagttgca ccgatcacgt caggccgagc ggccgatgcg ggcgaatgtc
     4261 ggatactcgg cgatcaagga tcattggcgc gaagcgttgt gaccggcacg gtggtgccgc
     4321 gtaagctcag cgatggcatt tggcaaccaa agatcacagt atctattgtc gatccgagcg
     4381 tgcgtgtccg gcgcaatccc tcgagggaat tctaggcgcc ggagagcagg aaggtatccg
     4441 accccctcgc atcatcatgt tgcggcagtc ccttgtcggt tcggcgcgtt atctgcggcg
     4501 ggctgagcga ccatccgaac tcgaagcgcc cgtttccagc acctgagtca tatgacagaa
     4561 aagttgcggg ccgaaacccg catgccccgc gaatttctcg gcaatgccgc ccttgggaag
     4621 ttcgagcgtg ggagcggcga ccgcggacgt cgcgtcgccg cccggcgtcg ccgatgaact
     4681 gacaccagat ccgataccgg accgtgcatt ggacgtcgcc gatgatttgg ccgtagatat
     4741 catcgtcaac tacatccaat caggctaggc ttggttgact ttgactccag accttt
//
LOCUS       DATILV010000612         5469 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2704521, whole genome shotgun sequence.
ACCESSION   DATILV010000612 DATILV010000000
VERSION     DATILV010000612.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5469)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5469)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5469
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2704521"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(367..1527)
                     /locus_tag="VLJ17_14280"
     CDS             complement(367..1527)
                     /locus_tag="VLJ17_14280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24180.1"
                     /translation="MYANTRFAFMAFVAVIALSGHISAAWAQAPQPPRMIPHFEVDPS
                     WPKLPSKWVWGQVSSVSIDSQGHAWILQRPSTVRNDQKGMAAPPVLEFDEAGNFIQGW
                     GGPGQGYDWPETEHGIYADPKGFIWLGGNGKSDHHLVKFTRDGKFVMQIGHKGQSKGN
                     KDTENVNQAADTFVYSPTNELFVADGYGNRRIIVFDADTGAFKRMWGAFGNEPLDNVP
                     AEPKVAEGDRIPAMQQTGPGPLQFVQPVHAARVSNDGLVYVSDRGGRRVQVFTLDGKY
                     QTQVFIDRYCEAPHCGNGQTVASTAFSHEPDQRYLYVASRSPARVWILDRKTLEPLDS
                     FGRNGVAPGEFYVMHHMNVDSKGNLYVTEVQDGKRIQKFVFKGYTTTPGTSH"
     gene            1849..2127
                     /locus_tag="VLJ17_14285"
     CDS             1849..2127
                     /locus_tag="VLJ17_14285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24181.1"
                     /translation="MSTTTNIAAAAALIVLIAPAPGSAQAPVKGNLQATVGAYAAATK
                     SSRASAQRGGVSLASAQIVTATDGRIVGADPDAAIRFELRRDATTCRY"
     gene            2216..2530
                     /locus_tag="VLJ17_14290"
     CDS             2216..2530
                     /locus_tag="VLJ17_14290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24182.1"
                     /translation="MSAMINVAAATAVFLALAPGSTQSLRNDYLRADNQPKWSGNAIS
                     GTYAAANTPQRATRPVPRGSVSKPNDPSIRHVIGPDGRDLGTDPDPKIRLQLQRDGGM
                     RM"
     gene            complement(2865..4523)
                     /locus_tag="VLJ17_14295"
     CDS             complement(2865..4523)
                     /locus_tag="VLJ17_14295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HSV24183.1"
                     /translation="MKKMLLLATFLCAWPGIALAQTMEELVNDGKNTDNVLNHSMGFD
                     RKSYSALKQINKSNIKRLVPIWSTSLMNDWGELSAPTVYNGIIYAINGKWTFAIDVET
                     GRQLWRTPVEAEPGVDRRGITRGAPVLYNGKLFRVTVDNHVIALDMKTGKQLWKEKFA
                     EAKEGYYATGAPIVANGVLISGMSGGESTTRGFLDGWDPETGKKLWRRYTIPAPGEPG
                     SETWPKNSDAWTRGGGPTWRSGSYDPQLDLVYWGTGNAEPYDPRPRGERDSLYTSSLL
                     AIRPKTGEIVCYYQYTPNDIYDVDGTDEQVLADLQISGQTRKVMIQANKNGFMYVLDR
                     TNCQPIAANAYVKVNWATHIDKETGRPILTDIYKKFLSGEEVEIFPSRGTNAVPIAFN
                     PNTGLVYASTWNVARLQKLAASNPQALGTVSTGVVARNPTFKPGDVVGAFVAVNPVTG
                     EKKWEVPLTDMPSAAGMLTTDGGLIFTGKLTGEFVALDADTGRTLWQLKLSSSVNSTA
                     ITYTHKGQQYVSVASGLGGAVAPRFAADKVPSGGSLWTFALMPD"
     gene            4955..>5469
                     /locus_tag="VLJ17_14300"
     CDS             4955..>5469
                     /locus_tag="VLJ17_14300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV24184.1"
                     /translation="MGVKLLWGLAAVAALSISAPVKAQETIKVAFIDPLSGGAASTGE
                     AGLKTYQFLADQLNAKGGVLGKRIEIVGYDNKLNPQESLIQIQKAIDAGIRIVTQGNG
                     SGVAAAITDFVAKYNDRNPGKEVLYLNYAAVDPVLTNEKCNFWHFRFDANSDIKMEAL
                     TNYMTPRTNIK"
BASE COUNT         1061 a         1640 c         1632 g         1136 t
ORIGIN      
        1 tttgcgccgt cgccagcggt gatatcgtcc ttggatatga cagtcaccaa atcggaaccg
       61 ccggcgacct gataaatcct cttggtcttg ccctcggtga caagcacacc cagcggatgc
      121 ttggtgtcag ggcggtgttc cgttttggcg tccacagctt gtttccgttt cggtttcaaa
      181 ttgatcctga acaatagtcc tcgaacgtcc catcatctat gacaaattag tctcaatcac
      241 aggctttcaa cacagattcc actctgaccc ggacctgctg cagagggcgt ccttcagcgt
      301 gatgcccggg acaagcccgg gcatcatggg gatcaagcgg caattccact caagcgtgaa
      361 aacgctctaa tggctggtgc cgggcgtcgt ggtgtaccct ttgaacacga acttctggat
      421 tcgctttccg tcctggacct ccgtgacgta gaggttgccc ttcgaatcca cgttcatgtg
      481 gtgcatgacg tagaattcgc cgggcgccac gccgttgcgg ccgaacgagt cgagcggctc
      541 cagcgtcttg cggtcgagga tccacacccg cgccgggctg cggcttgcga cgtagaggta
      601 cctctggtcg ggctcgtgcg agaacgcggt cgaggccacg gtctggccgt tgccgcagtg
      661 tggcgcctcg caatagcggt cgatgaacac ctgggtctga tacttgccgt cgagcgtgaa
      721 cacctgcacc cgcctgccgc cgcgatcgga gacatagacg agcccgtcgt ttgaaacgcg
      781 cgcagcgtgg accggttgca cgaactgcag cgggccaggc ccggtttgct gcatggcggg
      841 gatgcggtcg ccttccgcca ccttgggctc tgccggcaca ttatcgagag gctcgttgcc
      901 gaatgcgccc cacatgcgct tgaaggcgcc ggtgtcggcg tcgaacacaa taatgcggcg
      961 attgccgtag ccgtcggcga cgaaaagctc gttggtcggg ctgtacacaa aggtgtccgc
     1021 cgcttggttc acgttctcag tatccttgtt gcccttgctc tggcctttgt ggccgatctg
     1081 catgacgaac ttgccgtctc gggtgaactt gacgaggtga tggtcgctct tgccgttgcc
     1141 gccgagccag atgaacccct tcgggtcggc atagatgccg tgctccgtct cgggccagtc
     1201 atagccctgg cctggcccgc cccacccctg tatgaagttt cctgcttcgt cgaactccag
     1261 caccggcggt gctgccatac ccttctgatc gttgcgcacg gtgctggggc gctgcagaat
     1321 ccaggcatgg ccttgactgt cgatcgagac gctcgaaacc tggccccata cccatttgct
     1381 cggcaacttc ggccacgacg gatcaacctc gaaatgcggg atcatgcgcg gcggctgggg
     1441 cgcctgcgcc caagcagcac ttatatggcc cgaaagcgca atgacggcga cgaatgccat
     1501 gaaggcgaaa cgcgtatttg catacattgg gaacccccgg ggtctcgcgt tgcggatgtt
     1561 ctcacatcgc gcatcacatc cgatgcgttg ggaaaatgat agcggagttt cggcacagcg
     1621 cgatctgcag ccgcaaaggt agctgctggg gtggcggggt caatgggctc tcctgaactc
     1681 gcactgctgc gagcgggctt gcgcgtagcc acgcaagcct tcaatatggc gataaacggg
     1741 gatggatggg caaggattgt gttccttgcc cgggcgataa agctctcggc aagcagtctc
     1801 aaaaaatatc acagctgtcg tcgttcgata tcgaagggga ggagtaccat gtccacaacg
     1861 accaatatcg ctgccgctgc cgccctcatc gttctcattg cacctgcgcc gggttccgcc
     1921 caagcacccg tcaaaggaaa tctccaggcg accgtcggcg cctatgcggc agcaaccaaa
     1981 tcatcgcgcg cgtcggcaca gcgcggcggg gtttccctag catccgcgca gatcgtgacg
     2041 gccacggatg gccgtatagt cggcgccgac cccgacgcgg ccatccgctt tgaacttcgg
     2101 cgcgatgcga ccacatgccg atattgatgg tctttgcctt ggcaagccgt ctcgaatatc
     2161 tgcatcgcct tcagcgatat cgtcgcatcg tttgatatcg aacgaggccg aggctgtgtc
     2221 ggcaatgatc aatgtcgcgg ctgccactgc ggttttcctt gcgctggcgc caggttccac
     2281 gcagtcgctc cgcaatgatt atctgcgcgc cgacaaccaa ccgaaatggt cgggaaatgc
     2341 gatctcgggc acctacgctg cagcgaacac accacagcgc gccacgcggc ctgtcccgcg
     2401 cggcagcgtt tccaaaccga acgacccatc catccgccac gtaatagggc cggatggccg
     2461 cgatctcggc actgatcctg acccgaagat ccgtcttcaa ctccagcgcg atggaggtat
     2521 gcggatgtga tcgcgcggtc ggggagatgg tgttctgcct tggcattcgt gaccacaggc
     2581 acggagaccg gcgcccttga caatgccgag tccggccaaa ttctgggcgc atcataacct
     2641 gccgctcagc gaggtgggag cgacctcttg acttcttcaa gcaggatgtg gcccgcaacc
     2701 cgctgctgca tcacccggcg cataccgtct cagtggttcg gccaaaagca aaagttcatc
     2761 tgacgaacta atctattgca aataaaatga agtttcgcga cgccggcgat cgaggtgacg
     2821 cggcgcccgg cgcgagcctt gcgcccgcgc cgcgctgctt tcgctcaatc cggcatcaac
     2881 gcgaacgtcc acagcgatcc gccggatggc accttgtcgg ccgcaaagcg cggcgcaacg
     2941 gcgccgccaa ggccagacgc gacagatacg tattgctgac ccttgtgggt gtaggtgatg
     3001 gcggtggaat tgacactcga gcttagcttg agttgccaca gcgtcctgcc ggtgtcggcg
     3061 tctagggcga caaattcgcc ggtaagcttg ccggtgaata tgagcccgcc atcggtcgtc
     3121 agcatgcccg ccgcactcgg catgtcggtc aatgggacct cccatttttt ttcgccggtc
     3181 accggattga ccgccacaaa ggcgcccaca acgtcgccgg gcttgaaggt cggattgcga
     3241 gcgacaacgc cggtggacac ggtgccgagg gcttgcggat ttgacgccgc gagcttctgc
     3301 aaacgtgcaa cattccacgt gctcgcgtaa acgaggccgg tgttcgggtt gaacgcgatc
     3361 ggcaccgcgt tggtgccccg agacgggaaa atctcgacct cttcgccgga gaggaacttc
     3421 ttatagatgt cggtcaggat aggtcgaccg gtttccttgt cgatgtgcgt cgcccagttg
     3481 actttgacgt acgcgttggc ggcgatcggt tggcaattgg tacggtccag cacatacatg
     3541 aagccgttct tgttggcctg gatcatgacc ttgcgggtct gcccgctgat ctggaggtcg
     3601 gcgagcacct gctcgtcggt accgtcgacg tcatagatgt cgttcggcgt atattgataa
     3661 taacagacaa tctctccggt tttcggtcgt atcgccagca ggctggaggt atagaggctg
     3721 tcccgttccc cccgtggccg cggatcatag ggttcggcat tgccggtgcc ccaatagacg
     3781 agatcgagtt ggggatcata ggagcccgag cgccacgtcg gcccgccgcc gcgggtccag
     3841 gcgtcactgt tcttcggcca cgtctcggag ccaggttcac cgggcgccgg aatggtgtag
     3901 cggcgccaca atttcttgcc ggtttcggga tcccagccat cgaggaagcc tcgcgtcgtc
     3961 gactcaccgc cagacatccc ggaaatcaat acgccattgg cgacgatcgg cgcgccggtc
     4021 gcgtaatagc cctcttttgc ttcggcaaat ttctccttcc aaagctgctt gccggtcttc
     4081 atgtcgaggg cgatgacatg gttatcgacc gtcacgcgaa agagcttgcc gttatagagc
     4141 accggcgcgc ctcgcgtgat gccgcggcgg tccacgccag gctcggcctc gaccggcgtc
     4201 cgccaaagct gcctgccggt ctcgacgtcg atcgcaaagg tccacttgcc gttgatggca
     4261 taaatgatac cgttgtaaac cgtgggcgcc gatagctcac cccagtcgtt catgagactg
     4321 gtgctccaaa ttggcaccag gcgcttgata ttggatttgt tgatctgctt gagtgcactg
     4381 tagctcttgc gatcaaagcc catactatgg ttgaggacgt tgtcggtgtt cttgccgtcg
     4441 ttgacgagct cttccatcgt ctgggccaag gcgattcccg gccatgcaca caagaacgtt
     4501 gcgagcagca acatcttttt catgaagatc ctcccttggt tggacgtctc ttcggcgcaa
     4561 ggcgaaccac ggatagcggc attttgcgca gggggcgtct tgatattccg attgccaaga
     4621 agcggggcga tgttggccgt gtctgacctc ggccgaaatc actcgccgcc agtatagcct
     4681 gtcgacgggc cggtctcgac atctttgttt gccatcttcg tttgcatgcc taggttgggc
     4741 ggtagaaaaa cccatcaagg gcctgtgcgc acggtgcgat cggtgatggg ggcgccacca
     4801 ctccacccgt cctacgtcga ttttgccgcg cccggtcgcc ccttgccggc ccagtaagat
     4861 caactaggat cgcttccata tcagacggct cgtttaagaa gagccgaatc tgcaggcgtt
     4921 atcggcgcat cgcgcgcaaa ataaggagaa tgccatggga gtgaaactgc tgtgggggtt
     4981 ggcagccgtc gcggcgctga gcatctcggc gccggtgaag gcgcaagaaa caatcaaggt
     5041 tgccttcatc gatccactat cgggcggagc agcgagcacc ggcgaagccg ggctgaaaac
     5101 ataccagttc cttgccgatc agttgaacgc gaaaggcggc gtgctaggca agcggatcga
     5161 gattgtcggt tacgacaaca agctcaaccc gcaggaatcc ttgatccaga tacagaaggc
     5221 gatcgacgcc gggattcgca tcgtgacgca gggcaacggc tccggggtgg cggcagcgat
     5281 tacggatttc gtggcgaaat acaacgatcg caaccccggc aaggaagtgc tctacttgaa
     5341 ctacgcggcg gtcgatccgg tgcttactaa cgagaagtgc aatttctggc atttccgctt
     5401 tgacgccaat tccgacatca agatggaagc gctaaccaac tacatgacac cgcgcactaa
     5461 cataaagaa
//
LOCUS       DATILV010000613        15460 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1681587, whole genome shotgun sequence.
ACCESSION   DATILV010000613 DATILV010000000
VERSION     DATILV010000613.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 15460)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15460)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15460
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1681587"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..285
                     /locus_tag="VLJ17_14305"
     CDS             <1..285
                     /locus_tag="VLJ17_14305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24185.1"
                     /translation="LYPLADRRVSRFDSANDTHFQMVSEGAWPKRPIAQPAMDIGAEN
                     ILLEFDRSAKYIAFSLTGLSAILSLNHKIAMIVGGALLLGPFPWLMRAIP"
     gene            606..1493
                     /locus_tag="VLJ17_14310"
     CDS             606..1493
                     /locus_tag="VLJ17_14310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSV24186.1"
                     /translation="MFEIFGIPSTALFGQLLVGLINGSFYALLSLGLAVIFGMLNIIN
                     FTHGAQYMMGAFTAFLLLDYFDIGYWSALVLVPIIVGAVGVAIERLFLQWLYRLDHLY
                     GLLLTFGLALIIEGAFRHRFGSSGLPYAVPETLQGAQNLGFMFLPNYRAWVIAVSVVV
                     CFSTWFVIERTKLGSYLRAATENPTLVRAFGIDVPRMIMLTYGFGVALAAFAGVLAAP
                     IYNVSPQMGSELIIVVFAVVVIGGMGSILGAIVTGFGLGIIEGLTKVFFPEASNTVIF
                     VIMAIVLLIRPAGLFGRGA"
     gene            1567..2523
                     /locus_tag="VLJ17_14315"
     CDS             1567..2523
                     /locus_tag="VLJ17_14315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010683562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSV24187.1"
                     /translation="MVAVLILGPLPPLNLYPVDLVRALSFALFACAFNLLIGYGGLLS
                     FGHAMFFGWAAYVAAHLAKVGTISLPVWAGAWIWMVIPLPPLTPELAILGGTLFASLL
                     GVIAGSLAIRRQGIYFAMITLALAQMMYFFALQAKFTGGEDGIQAVPRGRLFGVIDLA
                     DTMAIYVFVAAVFVAAFLLIYRIINSPFGEVLKAIRENEPRAISLGYRTERYKLVAFV
                     ISATLAGLAGATKAIAIGLASLSDVQWQMSGEVVLMTLVGGLGTVFGPVVGAVIVVAM
                     QTQLVSFGQWVTIIQGVIFVVCVLLFRRGVVGELAARLRIRL"
     gene            complement(2533..3114)
                     /locus_tag="VLJ17_14320"
     CDS             complement(2533..3114)
                     /locus_tag="VLJ17_14320"
                     /inference="COORDINATES: protein motif:HMM:NF019430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HSV24188.1"
                     /translation="MTIRFKLEQALQSVVVFSSVMMVPPAAAQSSQRSEAPPVPPTIL
                     GPAMLRPGTADLSCGAGPAGLGPWGADRIEQTLSLDGGQRTKLNDLKTASQRAIQYLN
                     ESCPKNDPITPTGRLEAMERRLSAMLEAVRTVQPALDDFYATLTDEQKGRLSAIEASN
                     ETTPTYRDRSGRPHQRRGGSGHFRFRLPLPIPF"
     gene            3270..4451
                     /locus_tag="VLJ17_14325"
     CDS             3270..4451
                     /locus_tag="VLJ17_14325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20 family metallopeptidase"
                     /protein_id="HSV24189.1"
                     /translation="MTAPAETLVLDWLAAQKDAMIDLVRTLVDIDSGSYDKAGVDAVG
                     ARLRVFLAAHDIAFSVIANDHFGDAIRAQVNNPANSVTSVTANAPVLLLGHRDTVFPA
                     GEARRRPFHVVDGHGSGPGCCDMKAGVVINAFVLAAFARFAAAPSQVTALFTADEEIG
                     SPSSKALIKETARSARAVFNSEPGRPGGGIVTGRKGGKFMRISVIGKAAHAGNNLADG
                     ISAIEELARKIVKLHALTDLPNGISCNVGTIAGGQTVNTVAPHATAELDLRFIHPEEG
                     VRTLAEVETIVAEATVSGTRASLEITGEFEPLVASDASRRLFEHYATCARSLGQTVES
                     VFAGGCADSGFAASVGAPTICAVGPIGGCAHSPEEYLDVGSIVPRAQALALAIMRLDA
                     A"
     gene            4514..5920
                     /locus_tag="VLJ17_14330"
     CDS             4514..5920
                     /locus_tag="VLJ17_14330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24190.1"
                     /translation="MNIIADATPFTVASSRAVQKDDDTNIRWWQRLLFALFVTEALLL
                     AAFGWIDGEITGDTATYQVPLTWPGAFAEMRHPLYAVFLAWLDPIESHLRTIAVLQMA
                     FQFFACFMLFRETHRYGLSAAASFALAVSALFSQSFLLYGRQALPEVPAMSAMIISVA
                     ATFRWSSNEQSAAAPCVVALFAAIASFLRPIYLAAIPILPMMTLVFLRLSGGRAVAPR
                     TFGLAVALLVPFLAQSTMRAVTVGDFNVVSFSGFSMAGMAGLMIEPKHLPLYPEHLRP
                     IATDVLTGRTQAELAGTVYATPVNSQGENSFVSAALCYFDVYARSIDKVTWGVVGGMR
                     GENESWVEFNKRMQQFSIATLEIVPDRWVAWIVGGSSRFVGRSLITNVPFVLFTLAFL
                     AVGAVRIFGPDSPGNHLSMKDWIAVAVVAAGWAIMTISVAIIAYFPATRYIDTASVFI
                     PAIPLLAFITLAAWGRLR"
     gene            6278..6811
                     /locus_tag="VLJ17_14335"
     CDS             6278..6811
                     /locus_tag="VLJ17_14335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24191.1"
                     /translation="MLQKFALLVLAILLQGVACPPASAAEREDVRKVVNLVTAVKMPY
                     PESVTRNRAKTEHVWLERGGTTTGCIALEERRWCYEYIPPEGNRAEMLRVRNEPSRGV
                     YIGALYYYVVDFDLDGLLDVGSTTQIDALDRPRRTPIANVIRFFHRSTKRGEQSQPEY
                     QKMYDEAIQIALKYFGE"
     gene            6928..8025
                     /locus_tag="VLJ17_14340"
     CDS             6928..8025
                     /locus_tag="VLJ17_14340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavin oxidoreductase/NADH oxidase"
                     /protein_id="HSV24192.1"
                     /translation="MPSTLFSPIRLGSVELDNRIVIAPMCQYSAVDGCATDWHLAHLG
                     MLANSGASLVIVEATHVERHGRITHGCMGLYSDESEAALKRVIDFCRRTGTAKLGIQL
                     AHAGRKASAQRPWEGGGPLKPSQNPWETIAPSALPFGPAWHTPRAMLADDFERVRGAF
                     AAATQRAVRIGFDAIELHMAHGYLAHSFMSPIANRRTDEYGGSMENRMRFPREIAKAV
                     RQVVPRTIALGARITGTDWIDDGFTPADAVFCANALKAAGFDYVDVSSGGISSEARHP
                     TTPGYNVQIAEQVRATGISTRVVGLIVTAQQAEAIVADGKADMVALARAALDHPHWGW
                     HAARELGADVKRPNQYLRAAPALWPGAAVAR"
     gene            8162..8506
                     /locus_tag="VLJ17_14345"
     CDS             8162..8506
                     /locus_tag="VLJ17_14345"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HSV24193.1"
                     /translation="MIERRTDLRVRRFKAGSIVFNEAASVFDCTVRNISDTGACLLVT
                     SPLTVPAEFELMIEGERRPCAVAWRRPDRIGVKYQPFARFSPHQARKPRAGKPFEVGR
                     YVDIPKARRFAP"
     gene            complement(8414..9052)
                     /locus_tag="VLJ17_14350"
     CDS             complement(8414..9052)
                     /locus_tag="VLJ17_14350"
                     /inference="COORDINATES: protein motif:HMM:TIGR04282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04282 family arsenosugar biosynthesis
                     glycosyltransferase"
                     /protein_id="HSV24194.1"
                     /translation="MAMFHGNPNPVAIAILAKAPRPGLAKTRLAPVLGADGAASLQAQ
                     LIERIVATAQAATVGPVTLWATPDHDHPIFQTLAALLGVALAVQPDGDLGIRMAAAIV
                     AATGPAIVVGTDCPGLTPEHLRAAARALIDGVDVVIVPVEDGGYGLIGMRRLQPALFD
                     GINWSTSSVMAETRRRLTGLGLSWREPARLWDVDVPADLERLAGAGLAGLMR"
     gene            complement(9027..9713)
                     /locus_tag="VLJ17_14355"
     CDS             complement(9027..9713)
                     /locus_tag="VLJ17_14355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007067760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04283 family arsenosugar biosynthesis
                     glycosyltransferase"
                     /protein_id="HSV24195.1"
                     /translation="MKLSIVIPVLDEEDGIADALAALAPLRTRGVEIVVSDGASCDAT
                     VALARPLADMVIAAPRGRGSQMNAGAVASRGDVLVFLHADTRLPYNADALICDGLART
                     GHTWGRFDVRIAGAHWLFPVIAAAMNLRSRVTGIATGDQAIFATRSAFGQGFPDLPLM
                     EDIAFTKRLKRIGPPLCIAVPVVTSGRRWEKHGVMRTILLMWGLRFAHFLGVNPAWLA
                     RSYGYVPRQS"
     gene            complement(9710..10822)
                     /locus_tag="VLJ17_14360"
     CDS             complement(9710..10822)
                     /locus_tag="VLJ17_14360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24196.1"
                     /translation="MGFFAAGGSPGWGDGDTAYAEALSPPPGPLVRTDLFAHGGRGPT
                     SDPPSSAKEHKASPLPAGRVCPRDYIYDPSTFVRQPDFSAEILYVAGGLYGNLAAARA
                     IERLAEAECGDVAIVYNGDFHWFDADDAWFDSVEQAVAPYRALRGNVETEIARIIDIG
                     AGCGCAYPKAVADDIVMRSNQILNELRGVAARNQLACARLAGLPMHLVAEVGGLRIGI
                     VHGDATSLAGWGFTREILAGASAMLSDAHARSHIDIFASTHTCLALLHDTALPNGRLT
                     VINNGTAGMPNFTGTRHGLISRIARTPSPHPPIYGLVRDGVHVDAVAVTYDHAQFFNR
                     FLVRWPAGTPAHASHVQRILDGPAYTVAQALGYGVE"
     gene            complement(10870..11844)
                     /gene="arsS"
                     /locus_tag="VLJ17_14365"
     CDS             complement(10870..11844)
                     /gene="arsS"
                     /locus_tag="VLJ17_14365"
                     /inference="COORDINATES: protein motif:HMM:TIGR04167.1"
                     /note="Some members of this family are selenoproteins;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenosugar biosynthesis radical SAM
                     (seleno)protein ArsS"
                     /protein_id="HSV24197.1"
                     /translation="MRDTWPLLEKIDFPPLVRRRLDTLQVNVGYRCNQSCVHCHVGAG
                     PQRTEEMAGETVDLVLAVLANRHIVTLDITGGAPELNPHFRRLVGAARDIGVRVIDRC
                     NLTVLEVAGQEDLAEFLKKQHVEIAASLPCYLADNVDRQRGKGVFESSIRGLRRLNGL
                     GYGREGTGLVLNLVYNPQGPSLPPPQEALEADYRRELGDKFGILFNRLYTLANMPIQR
                     FGSTLISKGDFDRYLGLLREAHREENLDGVMCRDLVSIDWRGYLYDCDFNQMLDLPLT
                     VPGGARGRIEDLLTNDLDRNPIRVAGHCYGCTAGQGSSCGGALKEAAE"
     gene            12189..14336
                     /locus_tag="VLJ17_14370"
     CDS             12189..14336
                     /locus_tag="VLJ17_14370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSV24198.1"
                     /translation="MSIRNKLAGIVALLLIPVILLAYLFVQQSFKDIEFAAKERSGVV
                     YLRGAWPVLTGLVVDSNAGEVPAAKLKGPNLSQLGARYGTAMDAVEAGRDLDQALLAI
                     GWPAKALSRGEATEKAIAAARTLIGKVADGSNLTLDPDLDSFYVMDVVTVKLPEALER
                     LGKIVALAREMRGQASLSDDDKAEIMIQIGLFESATNGAAGSIESAFKGNEDRAVRRK
                     LEAPFKSFADAFGAFGAEAKQVANALRRDASRSKTDLSQLDQLYADATGRLERFWQSS
                     ATDLDRLLAARIDGLWWRMITMLGIAGVVVAIALLAAWWAARSILISIGRLDTRIREL
                     GDREINADLPGSDGRDEIAQIARAVLYFRDRTIEKLKVMEAAANEQREARLRADAATQ
                     RTEAERQATDLRQEMELSNALNRRADNFATTMDATIKAISNASSSMEAASLALTRTAD
                     LTERTSVGLATSSADASSNVHSVAAAAEEMTASISEISRQVQQSSSIAAAAVKQAEHT
                     DNRITELSKAASRIGDVVKLITAIAEQTNLLALNATIEAARAGDTGKGFAVVAQEVKA
                     LASQTAKATEEISHQISSMQAATQESVLAIKEIGGTIAQISENSTAIAAAVEEQTATT
                     REIGRSVQQAAGGTSGVAAKVEDIARGATETRDASRQVLASAQSLSQENGRLSAEIES
                     FLRVIRSGPLDRRHHDDPNYPGPERRIDDDAAA"
     gene            14427..>15460
                     /locus_tag="VLJ17_14375"
     CDS             14427..>15460
                     /locus_tag="VLJ17_14375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24199.1"
                     /translation="MSTAASLIPGLSIVNQRVIAWRSILIVSVIVAAAGAVRLIGARG
                     DLWLDEIWTLLLIAPARSVGEILLDIGHDNNHHLNSIYLYVIGPAASPLAQRGLAVAL
                     GTATVVVAGLAAAPRGPARIFAMLLFAFAYPMVHYGSEARGYAGLVLFLLLAAFFLRH
                     ALNHSDWRLRHALGAATGLGLLSHLTMVAGAALLGAWATWVLSRRNGSLRQATAATLA
                     IFRPALAWTFAIGGCVAIAGLRHSFSFGGITPFAPADFIDGYGGLIRLLLGVPDSVAD
                     AIPTWIWLAAAAVAITVAAHVWRDRDSYISLYFIALIGWPAVMFLAAMPNVQFSRYFL
                     VSGTFFLLFLA"
BASE COUNT         2872 a         4705 c         4762 g         3121 t
ORIGIN      
        1 ctttacccct tggccgatag gcgggtgagt cgatttgact cagcgaacga cacacatttt
       61 cagatggtta gcgaaggagc gtggccgaaa agaccgatcg cgcagcccgc catggacatc
      121 ggcgcagaaa atatactttt agaatttgat cgttccgcaa aatatatcgc attcagccta
      181 acaggcttat cggccatttt aagtttaaac cataagattg cgatgattgt gggaggggct
      241 ttattgctgg ggccttttcc ctggctgatg cgcgctattc cttagcggct gccattctga
      301 cacactcgct aacctattga ttggaaaggg gtcggaaatt gccgatttgt cagaataaac
      361 attgacgaaa aagcggaact ggccagcttt acagtcagct ccctttgccg ctcgggacac
      421 tcccccgtcg cgccgcgtaa ttaagccatc gcaagaggct acgcaatagc tgcctcgtca
      481 ttgctggcct cattctgaat gggcgttcag cagcctcacc cagtttgtga gccaatgtgg
      541 cttgattccg ccgtgcacat gttatggtgc tttgggaaga ggcgggtgtt gaggataggg
      601 gcgccatgtt tgaaatcttc ggcattccgt caacagcatt gttcggccag ctcttggtgg
      661 ggctgatcaa cggctcgttc tatgcgctgt tgagcctcgg gctcgcggtc atcttcggga
      721 tgctgaacat catcaatttc acccacggcg ctcagtacat gatgggcgct ttcacggcgt
      781 ttttgctgct cgattatttc gacatcggct attggtctgc gctggtgctg gtgccgatca
      841 tcgttggcgc cgtcggcgtc gctatcgagc ggctgttcct gcaatggctc taccggctcg
      901 atcatctcta cggcctgctg ctgacctttg gactcgccct cattatcgaa ggcgcattcc
      961 gccatcgctt tgggtcgtcg gggctaccct atgcggtgcc ggaaaccctg cagggcgcac
     1021 agaacctcgg attcatgttc ttgcccaact accgcgcctg ggtgatcgcg gtttccgtcg
     1081 tggtgtgctt ctccacctgg ttcgtgatcg agcgcaccaa gcttggctcc tatctgcggg
     1141 ccgcgaccga gaacccaacg ctggtgcgcg ccttcggaat cgatgtaccg cgcatgatca
     1201 tgctgaccta cggattcggg gttgccctgg cggccttcgc tggcgtgctg gcagcgccga
     1261 tctacaatgt cagcccgcag atgggctcag agctgatcat cgtggtgttc gccgtggttg
     1321 tgatcggcgg catgggttcg atcctcggcg caatcgtcac cggattcggc ctcgggatca
     1381 tcgaggggct caccaaagtg ttctttccgg aggcctcgaa cacagtgatc ttcgttatca
     1441 tggctatcgt actgctgatc cgccccgccg gcctattcgg gcgaggagcc tgatatggtg
     1501 gctcagaacc tcaccgtccc ggccaagtcg gcacggacca atagcgtcgc gatcgctttc
     1561 gccgtaatgg ttgcggtgct gatcttgggg cccctcccgc cgctcaacct ttatccagtc
     1621 gacctcgtgc gtgcgctgtc tttcgcgctg tttgcctgcg cgttcaatct gctgatcggc
     1681 tatggcgggc tgttgtcatt cggacatgcg atgtttttcg gctgggccgc ctatgtggca
     1741 gcacatctcg ctaaggttgg caccatcagc cttccggttt gggcgggggc gtggatctgg
     1801 atggttattc cgctgccgcc gctcacgccc gagcttgcca tcttgggtgg cacgttgttc
     1861 gccagtctcc tcggcgtgat tgccggcagc cttgcaatcc gccgccaagg catctacttc
     1921 gccatgatca cgctggcgct cgcccagatg atgtatttct ttgccctgca ggcgaaattc
     1981 accggcggcg aggacggcat ccaggcggtg ccgcgcgggc ggctgtttgg cgtcatcgat
     2041 cttgccgaca ccatggccat atatgtgttc gttgccgccg tgtttgtcgc cgcgttccta
     2101 ctcatctatc gcatcatcaa ttcgccgttc ggcgaggtgc tgaaggcgat ccgggagaac
     2161 gagccgcgcg cgatctcgct tggttaccgg accgagcgct acaagctcgt cgcattcgtc
     2221 atatcggcga cgctcgccgg gcttgcgggc gccaccaagg cgatagcgat cgggcttgca
     2281 tcgctctccg acgtgcagtg gcaaatgtcc ggtgaggtcg tcctgatgac gcttgtgggc
     2341 ggtcttggca cagtcttcgg gccggtggta ggcgccgtca ttgtcgtcgc catgcagacc
     2401 caactggtca gctttggcca atgggtgacg atcattcagg gcgtcatctt tgtggtgtgc
     2461 gtcctgctgt tccggcgggg tgtcgtcggc gaactagccg cacggctacg tatccgattg
     2521 tgattgggcg attcaaaatg ggatcggcag cggcaggcgg aaccgaaaat gcccgctccc
     2581 tccgcggcgc tggtgcgggc ggccggaacg atcccgatag gttggcgtgg tttcattgga
     2641 cgcttcgatc gcggaaagac gccccttctg ctcgtcggtc agggtagcat aaaaatcgtc
     2701 aagagcaggc tggacggtcc gcaccgcttc cagcatcgcg gagagccgcc gctccatagc
     2761 ctcgaggcgt cccgtgggcg tgatgggatc gttcttcgga caactttcat tcaggtattg
     2821 gatcgcccgt tgggaggcgg ttttgagatc gttgagcttg gtgcgttgcc cgccgtcgag
     2881 ggataatgtc tgctcgatgc ggtcggcacc ccatggtccg agacccgccg ggccggcgcc
     2941 gcaggacaaa tcagccgttc cggggcgcaa catcgctggc cccaggatcg tcggtggcac
     3001 cggcggcgcc tcactacgtt gcgaggattg cgctgccgca ggcgggacca tcatgacgga
     3061 tgagaacaca accacgcttt gcagcgcctg ttcaagctta aaccgaattg tcatttccga
     3121 tcccccggcg ctttgactcg atcatataat cattttacct ctccgccgct tgctgtggag
     3181 gggaagatcg ctgcgcgaaa ttgaagcggt ctttcgcagt ggagcctaaa tttaatattc
     3241 cgcaaaccaa cctgcgaaac gaggccacga tgactgcacc ggccgaaacc ttggtattgg
     3301 actggcttgc cgcccaaaag gacgccatga tcgacctcgt gcgcacactg gtcgacatcg
     3361 acagcggcag ctacgacaag gcgggcgtcg acgccgtggg ggcgcggttg cgcgtgtttc
     3421 tggccgcgca cgacatagcg ttttcggtta ttgccaatga tcacttcggc gatgccatcc
     3481 gggcgcaggt gaacaatcct gccaacagcg tgaccagcgt tacagcgaac gcgccggtgc
     3541 tgctgctcgg ccatcgcgac accgtatttc cggcaggcga agcgcgccgg cgccccttcc
     3601 acgtcgtcga cggccacggc tcggggccgg gatgctgcga catgaaggcc ggcgtcgtca
     3661 tcaacgcttt cgtgcttgcg gcatttgcgc ggtttgccgc cgcgccttca caggtcacgg
     3721 ccctgttcac cgccgatgaa gagatcggct cgccgtcgtc taaggcgctg atcaaagaaa
     3781 cggcgcggtc ggcccgcgcg gtgttcaaca gcgaacccgg ccgtccgggc ggcggaatag
     3841 tcaccggacg caagggcggc aaatttatgc gcatcagcgt gatcggcaag gcagcccatg
     3901 caggcaacaa tctcgctgac ggcatcagcg ccatcgagga actcgcgcgc aagatcgtca
     3961 agctgcatgc gctcaccgat ctgcccaacg gcatcagctg caatgttggc accatcgcgg
     4021 gcggccagac cgtcaacacg gtcgccccgc acgctacggc cgaactcgat ttgcgtttca
     4081 tccatcctga ggagggcgtg cgtacgttgg cggaggtcga aaccatcgtg gcggaagcca
     4141 ctgtctccgg cactcgcgcg agcctcgaaa tcaccggcga gttcgagccg ttggtcgcaa
     4201 gcgacgcatc gcgccgcctg ttcgagcatt atgctacctg cgcgcggtcg ctcggccaga
     4261 ctgttgaaag cgtgttcgcc ggcggttgcg ccgactcagg attcgcagct agcgtcggcg
     4321 cccctaccat ctgcgccgtc ggcccgatcg gcggctgtgc tcattcgccg gaggaatatc
     4381 tcgacgtggg ctcgatcgtt ccgcgcgccc aggcgctggc actcgcaatt atgcgattgg
     4441 atgctgcgtg aacacagtgc taaccgcatc gtgtcgcgat catcacgcgt tctaagattt
     4501 gaaagaggcg cggatgaata ttatcgcaga tgcgacgccc ttcaccgtcg ccagttcgag
     4561 agcggtgcaa aaggatgatg atacaaacat ccggtggtgg cagcgcctcc ttttcgcatt
     4621 gttcgtaacg gaggctctgc tcctcgccgc gtttggttgg attgatggcg agatcaccgg
     4681 cgatacggca acttatcagg tgccgctgac gtggcccggc gcatttgctg aaatgcgcca
     4741 tcccttatat gcggtttttc ttgcgtggct cgacccaatt gaaagccatc ttcggaccat
     4801 cgcggtctta cagatggcat ttcaattttt tgcatgtttc atgctgtttc gggaaacgca
     4861 tcgctatggt ctaagcgcag ctgcgagctt tgccctggcc gtatcagcac tttttagtca
     4921 atcgttcttg ttgtacggaa ggcaagcgct acccgaggtg ccggccatgt cggccatgat
     4981 aatatcggtg gcagcgacgt ttcggtggag cagcaacgag cagtcagccg cggcaccgtg
     5041 tgtggtcgcg ctgtttgccg cgattgcatc gtttctgcgg ccaatctacc tggctgcaat
     5101 tccgatactt cccatgatga cactggtgtt cctgcggctg agcggcgggc gtgcggtggc
     5161 tccgcggacc ttcgggttgg cggtagctct tctggttccc ttcctggcac agtcgacgat
     5221 gcgcgccgtc accgttggtg atttcaacgt tgtttctttc agcggctttt cgatggccgg
     5281 gatggcaggt ctgatgattg agccaaaaca tctcccgctt tatcccgagc accttcgtcc
     5341 tatcgcgacc gacgtattga caggcaggac acaggccgag ctggccggca ccgtttatgc
     5401 cacgcccgtg aactcacaag gagagaattc atttgtttcc gcggcgctgt gttattttga
     5461 tgtctatgct cgctccatcg ataaggttac ttggggtgtg gtaggcggaa tgagaggaga
     5521 aaatgaaagc tgggtggagt tcaataaacg catgcagcag ttttcaattg caacgctgga
     5581 aatcgttcct gaccgatggg ttgcttggat cgtcggaggc agtagccgct tcgtaggacg
     5641 cagcttgatc acgaacgtgc catttgtgct tttcaccctt gcgtttctgg ccgttggtgc
     5701 cgtccgaata ttcggccctg attcgcctgg gaatcacctg tctatgaagg actggattgc
     5761 cgtggcagtc gtcgcggctg ggtgggcgat catgacgatt agcgttgcaa tcatcgctta
     5821 ttttcctgca acgcgttata tcgatacggc cagcgtgttc atccctgcca ttccgctgct
     5881 ggctttcata acgttggcgg cgtgggggcg tctgcgctga taggcggaca ctctgtgtgc
     5941 aggacggcag gttggtgtcg accgagcgcc ggagaacgca gcagacgtgg ccaacgatcg
     6001 agcgggaaat tcttgcgtgc caggtgctgg atttcagttc ggcgggcgtg cccccaaact
     6061 cggcggatgt cataagggaa ctttggcgac ccagtcgcgt tatagctcat gcgttggaag
     6121 gggatgacga ttgattgcgc gacggtcaac gctcaaagtt ctcaaacctg ccatttattt
     6181 agcaacagcc aaagattcga ccctgagtcc ccatctccga cctgacaagg agtggttgag
     6241 ttaccaaaaa gggtgctttt caggaaaggg attcacaatg ctgcagaaat ttgcgcttct
     6301 ggtgttggct atcctgctgc aaggcgtcgc gtgtcctccc gcctcggccg ctgaacgcga
     6361 ggacgtgcgc aaggtcgtca atctggtcac tgccgtgaag atgccgtatc cggaaagtgt
     6421 tacgagaaat cgggccaaga ccgaacacgt ctggctcgaa cggggtggca ccacgactgg
     6481 ctgcattgcg cttgaggaac gtcggtggtg ttatgaatac attccgcccg aaggcaacag
     6541 agcggaaatg ctccgcgttc gcaacgagcc ttcgcggggt gtatatatag gcgccttgta
     6601 ttactatgtg gttgatttcg atctcgacgg tcttctcgat gtgggatcaa cgacgcagat
     6661 cgacgcgctc gatcggccgc gtcgtacccc gattgcgaac gtaatccgat tcttccaccg
     6721 cagcaccaag cgcggcgagc agtctcagcc cgaataccag aagatgtacg acgaggccat
     6781 ccagatcgcg ctcaagtatt tcggggaata gacgcggcga cgttgtctgc tgccgcatag
     6841 acggcccgcg cagcatgcag ttgcggccgc ggcagcaatc gatatatccg gaccgttcga
     6901 ttcctctttc gtacggtcgc tatcctcatg cccagtaccc tattttcgcc gatccggctt
     6961 ggcagcgtcg agctggataa tcgcatagtc atcgcgccca tgtgccagta tagcgccgtc
     7021 gacggctgcg ccaccgactg gcacctagcc catctcggta tgctcgcgaa ttccggcgct
     7081 agcctcgtca tcgtcgaggc tacccacgtg gaacgccacg gtcgcatcac ccatggctgc
     7141 atggggcttt attccgacga gtccgaagca gccctcaagc gcgtcataga tttctgccgc
     7201 cgcaccggga cggcgaagtt gggcattcag ctcgcccatg cgggccgcaa ggcgtcggcg
     7261 cagcgaccct gggaaggcgg cggccccctg aaaccgagcc agaacccttg ggagaccatt
     7321 gcgccgtcgg cgctgccttt cgggcccgcc tggcacaccc cacgcgccat gctggcggat
     7381 gatttcgagc gcgtgcgcgg tgccttcgcg gcggcgacgc aacgcgccgt gcgcattggt
     7441 ttcgacgcca tcgaactgca tatggcccac ggctatctgg cgcacagctt catgtcgccg
     7501 attgcgaacc ggcgcaccga tgaatacggt ggatcgatgg aaaatcgcat gcgcttcccg
     7561 cgcgaaatcg cgaaggcggt gcggcaggtg gtgccgcgca ccatcgcgct cggcgcccgt
     7621 atcaccggca ccgactggat tgacgacgga tttacaccgg cagatgctgt attctgcgcc
     7681 aacgcgctca aggctgccgg cttcgactat gtggacgtgt cctccggcgg catttcgtcc
     7741 gaggcacgcc atccgaccac gcccggttac aatgtccaga tcgccgaaca ggtgcgcgca
     7801 acgggcatct cgacccgcgt tgtgggcctc atcgtgacag cgcagcaagc ggaggccatt
     7861 gtggccgacg gcaaggcgga catggtggcg ctggctcgtg cagccctcga ccatccccat
     7921 tggggctggc atgcggcccg cgagcttggt gccgacgtca agcggcccaa tcaatacctg
     7981 cgcgccgctc cggcgctgtg gcccggcgcc gccgttgcac gttaattgtt aatgcgaaga
     8041 tgtgctggct gcggggtgaa agctgcgacg agatgcggta aggtgcggcg actagtgact
     8101 agctccaaat cgatgaaccg aggcggggcc taccgccgtc gcgttgcatg acggagaaca
     8161 catgattgaa cgccggacag acttgcgcgt tcgccggttc aaggccggta gcatcgtctt
     8221 caacgaagcc gcatcggtgt ttgattgcac ggtccgcaac atctccgaca ccggcgcctg
     8281 tctgctggtg acgagcccat taaccgttcc ggccgagttc gaacttatga tcgagggcga
     8341 acgtcgcccc tgcgcggtag cgtggcgtcg gcccgatcgc attggggtaa agtatcaacc
     8401 gttcgcacgg ttctcaccgc atcaggcccg caagccccgc gccggcaagc cgttcgaggt
     8461 cggccggtac gtcgacatcc caaaggcgcg ccggttcgcg ccatgacagg ccgagcccgg
     8521 tgaggcggcg acgcgtttcc gccatcacgg acgaggtgct ccagtttatg ccgtcgaaca
     8581 gcgccggctg cagtcgtcgc atgccgatga gtccgtagcc accgtcttcc accggcacga
     8641 taacgacgtc cacaccatca atgagcgccc gcgccgcagc gcgcagatgc tcgggcgtga
     8701 gtcctgggca atcggtgccg accacgatcg caggtccggt cgccgccacg attgctgccg
     8761 ccatgcggat gccaagatcg ccgtccggtt gcaccgcgag ggcaacgccg agcagcgccg
     8821 caagggtctg gaatatcgga tgatcgtgat ccggcgtcgc ccacaaggtg accggaccga
     8881 cggtggctgc ttgcgcggtg gccacgatgc gctcgatgag ctgggcctga aggcttgcgg
     8941 cgccgtcggc acccagcacc ggtgccagcc gcgtcttggc aaggccaggc cgcggcgcct
     9001 tggccagaat cgcgatcgct accgggttag gattgccgtg gaacatagcc ataggatcgc
     9061 gccagccaag caggatttac accgagaaaa tgggcgaatc gtagccccca catgagcaga
     9121 atcgttctca tcacaccatg cttttcccat cgccgtcctg aggttacgac cggcacggcg
     9181 atgcacaacg gtggtccaat gcgcttgaga cgcttcgtga aggcgatgtc ctccatcagc
     9241 gggaggtccg ggaaaccttg tccgaacgcc gacctcgtcg cgaatatcgc ctggtcgccg
     9301 gtcgcgatgc cggtcacccg ggaacgtagg ttcatcgccg cggcgatcac tgggaacagc
     9361 cagtgcgctc cggcaatgcg aacgtcgaaa cgtccccaag tatgaccggt tcgggcaagc
     9421 ccatcgcata tgagagcgtc ggcgttgtat ggaaggcgtg tgtcggcgtg caggaacacc
     9481 agcacgtcgc cgcgggaagc caccgcaccg gcgttcattt ggctgccgcg cccgcgcggt
     9541 gccgcaatga ccatatcggc cagcgggcgg gcgagcgcga cggtcgcatc gcagctggcg
     9601 ccgtccgaca ccacgatctc aacgccgcgt gtgcgcagcg gcgccaatgc ggcgagggca
     9661 tccgcgatgc cgtcctcctc gtcgagcacc ggaatgacga tggagagttt cattccacgc
     9721 catatccgag cgcttgcgcg accgtgtagg ccggcccatc aaggatgcgc tgcacgtggg
     9781 acgcatgggc gggagtgccg gccggccagc ggacaaggaa gcgattgaaa aattgcgcgt
     9841 ggtcgtaggt gaccgcgacc gcatcgacat gcacgccatc gcgcacgagt ccatagatgg
     9901 gcggatgggg tgagggcgtc ctcgcgatcc gcgagatgag gccgtggcgc gtgcccgtga
     9961 aattgggcat gccggcagtg ccgttgttga tcacggtaag gcgcccgttt ggcagcgcgg
    10021 tgtcgtgtaa cagggcaagg cacgtgtggg tcgaggcaaa tatgtcgatg tgcgagcgag
    10081 cgtgcgcatc ggagagcata gctgacgccc cggcaaggat ctcgcgggtg aagccccagc
    10141 ccgcaagcga cgttgcgtcg ccatgcacga tgccgatgcg aagaccgccg acctcggcca
    10201 caaggtgcat aggtagtcca gcaaggcgcg cacaggcgag ctggttgcga gcagccacac
    10261 cgcgcaattc attcaaaatc tggttcgacc gcatgactat gtcgtcggca acggctttcg
    10321 gataggcaca cccgcatccg gcgccgatgt cgatgatgcg ggcgatctcg gtttcgacgt
    10381 tgccgcgcaa cgcacgatag ggcgccacgg cctgttcgac ggaatcgaac caagcatcat
    10441 cggcatcgaa ccaatgaaag tcgccgttat agacgatcgc gacatcgccg cactcggcct
    10501 ccgcaagccg ctcaatcgcc cgcgccgccg cgagattgcc gtagagacca ccggccacgt
    10561 agaggatttc agctgaaaaa tccggctgtc gaacgaatgt cgacggatcg taaatatagt
    10621 cccgcggaca aacgcggccc gcaggcagcg gcgatgcctt gtgctccttc gcgctgcttg
    10681 gtggatcgga ggttggacct cgtcccccat gagcgaagag gtcggtccgc acaagcgggc
    10741 cgggcggggg tgacagcgct tcagcatatg ctgtgtcgcc gtcgccccac cccggactgc
    10801 ctccggcagc aaagaaaccc aatttgccct ccccctctcg gggagggtcg cggtacgcga
    10861 gacccatatt tattccgccg cttccttcag ggctccaccg cagctcgaac cctggccggc
    10921 ggtgcagcca tagcaatggc cggcaacccg gatagggttg cggtcgagat cgtttgtcag
    10981 caggtcttcg atccggcctc gcgcaccacc ggggacggtc agtggcaaat cgagcatttg
    11041 gttgaagtcg cagtcataaa gatagccgcg ccaatcgatc gacacgaggt cgcggcacat
    11101 gacaccgtcg agattttctt cgcgatgggc ctcacgcagc agccccagat aacggtcgaa
    11161 gtcgcccttg gagatgaggg tcgatccaaa cctttgaatt ggcatgttgg caagcgtata
    11221 cagccggtta aataagatgc cgaatttgtc ccctagctca cgccggtagt cggcctcgag
    11281 cgcctcctgg ggcggcggca gggagggacc ttgcggattg tagacgaggt tgaggacgag
    11341 gccggttccc tcacgtccat agcccaaccc gttgaggcgc cgcagacctc tgatcgagct
    11401 ttcaaagaca cccttaccgc gttgcctgtc cacattatcg gcgaggtagc acggcagcga
    11461 ggccgcgatc tcgacgtgtt gtttctttag aaattccgcg aggtcttcct gaccggccac
    11521 ctccagaacg gtgagattgc agcgatcaat cacccgcacc ccaatgtcgc gtgcggcacc
    11581 taccagccgg cggaaatgcg gattgagttc cggcgccccg ccggtgatgt cgagcgtcac
    11641 gatgtgccga tttgccagca ccgccagcac gaggtcgacg gtctcgcctg ccatctcctc
    11701 ggtgcgctgc ggccctgcgc ccacatggca atgcacgcac gattggttgc agcggtagcc
    11761 gacattgacc tgcaaggtgt cgagccgccg gcggacgagc ggtggaaaat cgatcttttc
    11821 aagcagcggc caagtatcgc gcatcgcgta tccggaaact gatcctactc accgtcgggg
    11881 ccggcggcgt gcgtcgaaat cggaaattcg cacagacacc ggctgacgtc acgtgctgta
    11941 gggcagccaa gcgcacaact tcccgaggcc acttcgtgaa gacccgtgaa gagtcctatc
    12001 ccacctcgac agcatactcc acccgggtaa actcgacagc atattccacc gggtaaatat
    12061 gcatcgagcc gtcaaaccgg acgcagcgtc cgcagcgccg gaataggcgg ccctagtcgc
    12121 aaaaccttaa ggaattgcca tcattgtgac ccggcctcat ccagaatttg ccggaaatcg
    12181 atccctccat gtccatccgc aataagcttg ccggcatcgt ggcgttattg ctgatcccgg
    12241 tcatattgct ggcgtacctg ttcgttcagc aaagtttcaa agacatcgag ttcgcggcca
    12301 aggaacgcag cggtgtagtg tatctgcgag gcgcgtggcc ggtattgacg gggctcgtgg
    12361 tcgattcaaa tgccggcgag gtaccggccg caaagcttaa aggtccgaat ctgtcccagc
    12421 ttggtgctcg atacggcacc gccatggatg ccgtcgaggc cggtcgcgac ctcgaccaag
    12481 cacttttggc aatcgggtgg cccgccaagg cactgtcacg cggcgaggca accgaaaagg
    12541 ccatcgcagc agcccgcaca ctgatcggca aggtcgcaga cggatccaac ctcacgctcg
    12601 accctgacct cgacagcttc tacgtcatgg acgtggtgac cgttaagctt ccggaagcgc
    12661 tcgagcgtct cggtaagatc gtggcgctgg cgcgggaaat gcggggccag gcaagccttt
    12721 cggacgacga caaggccgaa atcatgatcc agatcggcct gttcgaaagc gccacgaacg
    12781 gcgcggccgg ttcgatcgaa tccgccttca aaggcaacga agacagggcg gtccgccgta
    12841 agctggaagc tccattcaaa tcctttgcag atgcctttgg ggcatttggc gccgaggcca
    12901 agcaggtcgc caacgcgttg cgccgcgatg ccagtcgtag caagaccgat ctgtcccagc
    12961 tcgaccagct atatgctgac gccaccggca ggcttgaaag gttttggcag agttccgcca
    13021 ccgatctcga tcgactgctg gctgctcgta tcgacggcct gtggtggcgc atgatcacga
    13081 tgctcggcat tgcgggcgtc gtggtcgcca tcgcgttgct ggccgcgtgg tgggcggcgc
    13141 gctccattct gatcagcatc ggccggctcg acacccgtat ccgcgagctc ggcgacagag
    13201 aaatcaatgc cgaccttccc gggtcggacg gccgcgatga aatcgcccag attgcgcgtg
    13261 ccgtacttta cttccgtgac cgcaccatcg agaagctcaa ggtcatggaa gcggcggcaa
    13321 atgaacaacg tgaagcccgg ctgcgcgcgg acgccgcgac gcagcggacg gaggccgaaa
    13381 ggcaggcaac cgacctgcgc caggaaatgg agctcagcaa cgcactgaat cgacgtgccg
    13441 acaatttcgc aacgacgatg gacgccacca taaaggccat ctcaaatgcc tcatcgtcca
    13501 tggaagccgc ctcgctggcg ctgacccgga cagccgactt gaccgagcgg acttcggttg
    13561 gattggcgac gtcgtcggcg gatgcctcca gcaacgtcca ctccgtggcc gctgcagccg
    13621 aagaaatgac ggcctcgatc agcgagatca gccgtcaggt ccagcagagc agcagcatcg
    13681 cggcggcggc ggtgaagcag gccgaacaca ccgacaaccg gatcaccgaa ctttccaagg
    13741 cggcctcacg catcggcgac gtcgtcaagc ttatcacggc gatcgccgag cagacaaacc
    13801 tgttggccct caacgcgacc atcgaggccg cacgcgccgg cgataccggg aaaggctttg
    13861 cggtcgtggc gcaggaggtc aaagcgctgg cgtcccagac ggcgaaagcg accgaggaaa
    13921 tcagccatca gatttccagc atgcaggctg ccacccagga atccgttctg gccatcaagg
    13981 aaatcggcgg aacgattgcg cagatttccg agaattcaac agccattgcg gcggcagttg
    14041 aagagcagac cgcgaccacc agggaaattg gtcgcagcgt acagcaggct gccggcggca
    14101 cctccggcgt cgcagctaag gtcgaagata ttgcacgtgg ggcgactgag acacgcgatg
    14161 cgtcccgaca ggtccttgca tcggcacagt cgctgtcgca ggaaaacggc cggctgagcg
    14221 ccgagatcga aagtttcctg agagtgatca ggtctggccc gctcgacagg cgccaccatg
    14281 atgatccgaa ttaccctggt ccggagcgtc gaattgacga tgacgcggcg gcttgaccgc
    14341 agtcgtcgca ctcgcggggt cgatttcagc agttggcgac gcgttggtcg cgccgctcgg
    14401 actgggcgac gaacaccgga gcatgcttga gtacggccgc gtcattgatt cctggtttgt
    14461 cgatcgtcaa tcagcgggtg atcgcgtggc gctcgattct gattgtctcc gtcattgtcg
    14521 ctgccgctgg cgccgtccgc ctgatcggtg cgcgcggcga tctctggctc gacgaaatct
    14581 ggacgctgct gctgatcgcg ccggcccgct cggtgggcga gatccttctc gatatcggtc
    14641 acgacaataa tcaccacctg aattcaatct atctttatgt gatcggtccc gctgcctcgc
    14701 cgctggcgca acgcggcctt gccgtcgcgc tcggcactgc cacggtcgta gtcgcaggac
    14761 tcgccgccgc gccgcgcggt cccgcccgta tcttcgcaat gctgctgttc gcgttcgcgt
    14821 atccgatggt gcactacgga tcagaagcac gtggctatgc cggccttgtg ctgttcttgc
    14881 tgctcgctgc gttcttcctc cggcatgcgc ttaatcactc cgattggcga ttgcgccacg
    14941 cccttggggc agcgaccggg ctcggcttgc tgtcccactt aaccatggta gcaggcgccg
    15001 ctttactcgg cgcctgggcg acctgggtgc tatcgcggcg gaacggcagc ctgcgccagg
    15061 caacggcggc gacgctcgca atattccgcc cggctctagc gtggacattc gcgatcggcg
    15121 gctgtgtcgc catcgccggc ctgcgccaca gcttcagctt cggcggcatt actccgttcg
    15181 cgccggcaga cttcatcgac ggttatggcg gactcatccg gctgctgctg ggagtaccgg
    15241 attcggtcgc agacgcgatt ccgacctgga tctggctcgc ggcggcagcg gtggccatca
    15301 cggttgcggc ccacgtctgg cgtgatcgcg acagctacat cagcctgtat tttatcgcgc
    15361 tgatcggatg gccagccgtg atgtttctcg ccgccatgcc caatgtgcaa ttctcccgct
    15421 atttcctggt gagcggaacc ttttttctgt tgttcctcgc
//
LOCUS       DATILV010000614         1590 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1425461, whole genome shotgun sequence.
ACCESSION   DATILV010000614 DATILV010000000
VERSION     DATILV010000614.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1590)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1590)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1590
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1425461"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            39..1085
                     /locus_tag="VLJ17_14380"
     CDS             39..1085
                     /locus_tag="VLJ17_14380"
                     /inference="COORDINATES: protein motif:HMM:NF033517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HSV24200.1"
                     /translation="MRRTIVRRFDVETGHCGGCGGHVQGRHPLQTSDALGAAHVQVGP
                     QALTLAAHMSKEMGISHERAAQVLGWGYDLRVSRSALCRAMARLSKKAEPSYEELQRA
                     ARHSFVNHLDETGWRVAAHLEWLWVCVSADVTVYAILPGRGFAQAASILGADYAGFLN
                     HDGWQPYYRFPDAFHQTCLSHLLRRCKDMLATASATAARFPQAVQQVLLKGLSLRDRY
                     ARHEISTHGLHVTTGRLVAHMDRLLSKTFRDPANRRLAKHLRLEQPWLFTFLHCPGIE
                     ATNNAAERALRPAVVARKTWGGNRTENGAKTQQILISVLATCRQQGKDSFDRITQLFR
                     SPIPIVLDLIPNSS"
     gene            1106..>1590
                     /locus_tag="VLJ17_14385"
     CDS             1106..>1590
                     /locus_tag="VLJ17_14385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24201.1"
                     /translation="MNDLTVIRFAGRCFSSEDVALMCQAARDYASLGITEIARTVCEW
                     LDWKRPNGRLKNHECRLLLERLRDQGVLPLPSLHRSGPRGAHTVAITDQSDAQPLIQT
                     TVANLQPLRLLQIESGDSALFRQFIQRYHYLGYRTPASANLRYFVQSATGQFLACLQW
                     S"
BASE COUNT          320 a          483 c          449 g          338 t
ORIGIN      
        1 ttcaggatga cacgcagcct cagtatcagg aagacatcat ccgacggacc atcgtcaggc
       61 gcttcgatgt ggagacgggt cattgcggcg gatgcggtgg acatgttcaa ggccgacacc
      121 ccttgcaaac gtccgatgct ctgggagcgg cacacgtaca agtgggtccg caggcattga
      181 cgctggctgc ccatatgagc aaagagatgg ggatctctca tgagcgggca gctcaggtat
      241 tgggatgggg ttacgatttg cgagtcagcc gaagcgcatt gtgccgggcg atggcgcggt
      301 tgagcaagaa ggcggaaccc agctatgagg agcttcagag agccgcccgt cacagtttcg
      361 tcaatcacct tgatgagact ggttggcgag tggccgcgca tctggaatgg ctttgggttt
      421 gtgtcagcgc cgatgtcacc gtctatgcga ttctgcccgg acgtggattt gctcaagcgg
      481 cctcgatatt gggcgccgat tacgccgggt ttctgaacca tgacggctgg cagccctact
      541 atcgttttcc ggacgcgttt catcaaacgt gcttgagcca tctgctccgg cgatgcaaag
      601 acatgctggc aacggcatcg gcaacggccg cacgctttcc acaggccgtc cagcaggtgt
      661 tgctcaaagg cttgtcgctc cgcgaccgtt atgcgcggca cgagatctcg acgcacggat
      721 tgcacgtgac gacaggtcgg ctcgtcgcgc acatggaccg gttattgtcc aagacgtttc
      781 gcgatcccgc caatcggcgg ctggccaaac acctgcgtct tgaacagccg tggcttttca
      841 cgtttctgca ttgtccaggc atcgaggcga ccaataatgc cgccgaacgg gcgttgcgtc
      901 cagctgtggt ggcccgaaaa acctggggcg gcaatcggac cgaaaatggc gcgaagaccc
      961 aacagattct gatcagcgtt ctggccacat gccgtcaaca aggcaaagac tccttcgatc
     1021 ggatcacgca actgttccgg tcgccgattc cgatcgtgtt ggatctgata cccaacagtt
     1081 cgtaacccct gttctccgaa gtctcatgaa cgatctcacc gtcatccgct ttgccggacg
     1141 ctgtttttcc tccgaagatg tcgccttgat gtgtcaggcg gcccgcgatt acgcctccct
     1201 cggtatcacc gagatcgcgc gcactgtctg cgagtggctg gattggaaac ggccgaacgg
     1261 tcgattgaaa aaccatgaat gccggttgct tctggaacga ttgcgcgatc aaggcgtatt
     1321 accccttccc tccctacatc ggtccggccc gcgcggcgcc cacacggtcg ccatcaccga
     1381 tcaaagcgat gctcagccgc tgattcaaac cacagtcgcc aatttgcaac cactgcgcct
     1441 gctccagatc gaatccggcg atagcgctct gttccgccag ttcatccaac gctatcacta
     1501 cctcggctat cgcacacccg ctagcgccaa cttacgctac ttcgtccaat ccgccacggg
     1561 ccaattcctt gcctgccttc agtggtcgag
//
LOCUS       DATILV010000615         1968 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1938874, whole genome shotgun sequence.
ACCESSION   DATILV010000615 DATILV010000000
VERSION     DATILV010000615.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1968)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1968)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1968
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1938874"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            509..>1968
                     /locus_tag="VLJ17_14390"
     CDS             509..>1968
                     /locus_tag="VLJ17_14390"
                     /inference="COORDINATES: protein motif:HMM:NF020036.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HSV24202.1"
                     /translation="MTRTRTVWWSVALLILATAEAAAVEPRRVLILHAFGHAYSPWSD
                     MAGSFRAELIKKSPEPIDLYEVSLDTARAQDPQDDEPFVEYIRAILSGRKLDLIVPVG
                     APATFFVQRYRPLLFPTTPMLIVGADVRRIPSATRTKNDTAVLLDLDLPAYLKNILRL
                     RPQTTDIAVVVGNSPVERFWTSELRRDFQLVADRVNITWFNDLTFGEMLRRAATMPPQ
                     SAIFWFLLSEDAAGVPYSQDRALDTMREVAVVPIFGMGDYQLGRGIIGGPLMQTRALG
                     EAAAEVGLRILKGETPGDINPPSVLFGAPTYDWRELQRWNVSEALLPLGSIVHFREPT
                     VWQQYRWQIMVVAATILAQTLLIAYVLFQGRRRRAAEMSLKESEERMTFTAASANVGL
                     WQFDRETNELWATEHCRTLFGLKRDVPLTRDTFLATIHPEDREAAISSLREVSHADQP
                     AINDIRVVLQQEQVRWIRIRARSHSDNRGASNQLSG"
BASE COUNT          402 a          545 c          583 g          438 t
ORIGIN      
        1 acatttctat ctctatgaca ggcaaatgcg gtcgcgaagc aggattgcgg cgcaagccgc
       61 agtgaggagg agcatggcgc aggcagccag cctttcggcg gcatcgccac ggggatcgcg
      121 tgcgataggc gatcgccgga aaagcactat cgagaaaaat ggcgacgctc tattggccca
      181 tggtccagga ttgaacgggc ggccagcgcg gtcgctgagc gggatttgca cgaggcattg
      241 aaagcgaaca atcgcacgga tttttgagcg tttccgggat aggacacacg acgtggtcaa
      301 accttgggct gattatttcg caatattggc ccgtgccgat aagctagcgt attagggagt
      361 tggttggaga tatggcaacg tccagttgtt gtcctttcct tgtcattgaa cgtacgctca
      421 cagcgtgcgg cgcagccttt ctgccgattt tcgcattccg atcgccaaac gcctgggttg
      481 cggacccaac tgggcagcct acttgacgat gactaggacg cgcacagttt ggtggagcgt
      541 agcgctcttg atattggcta cagcggaagc ggccgccgta gagccacggc gcgtcctgat
      601 cctgcacgcg ttcggtcatg cctactcgcc gtggagtgat atggccggaa gttttcgcgc
      661 agaactcatc aagaagtccc cggagccgat cgatctctac gaggtctcgc ttgacacggc
      721 tagggcccaa gacccccagg acgatgagcc gtttgtcgag tacattcgtg caattctttc
      781 cgggcgcaag ctcgacttga tcgtgcctgt gggcgcccca gcgacgttct tcgtgcaacg
      841 ttaccggccg ctgctgtttc caacgacgcc tatgctgatt gttggagccg acgtgcggcg
      901 cattcccagc gcaacacgta cgaaaaatga cacggctgtt ctgctggacc tcgatcttcc
      961 agcctatctt aagaacattc tgcgcttgcg gcctcaaacg acagatatag cagtcgttgt
     1021 cggtaattct cccgttgagc gattttggac ttcagaactt cgtcgcgatt ttcagctggt
     1081 tgccgatcga gtgaatatca cgtggttcaa tgatttgacg tttggcgaga tgctaaggcg
     1141 cgccgctacg atgccgccgc agtctgccat cttctggttt ctgctttcgg aggacgcggc
     1201 gggcgttccc tattcgcagg accgcgcact cgatacgatg cgcgaagtcg cagtcgtgcc
     1261 gattttcggt atgggcgact accagctggg ccgaggcatc atcggcggtc ctttgatgca
     1321 aacgagagct ctaggcgagg cggcggcgga ggtaggtctt cgcattctaa agggtgagac
     1381 accaggcgac atcaatcccc cctctgtgct cttcggagca ccgacgtatg attggcggga
     1441 actacagagg tggaacgtca gtgaggccct cctgccgctc ggcagtattg tgcacttccg
     1501 tgaaccgacc gtatggcagc aatatcgttg gcaaatcatg gtcgtcgcag cgacgatcct
     1561 ggcgcagaca ttgctcattg cctacgtgct ctttcaaggc cgcagacgtc gagcggctga
     1621 gatgtcgctc aaggaaagcg aggagcgaat gacgttcacg gccgcgtccg ccaatgtcgg
     1681 actttggcaa tttgaccggg aaaccaacga attgtgggcg accgagcatt gccgcacact
     1741 gttcggccta aagagagatg ttccactcac gcgcgacacg ttccttgcga caatccatcc
     1801 ggaggatcgt gaggctgcca tctcctctct tcgagaggtt tcgcatgcgg accagcccgc
     1861 catcaacgac atccgcgttg tgcttcagca ggaacaagtg cgttggatcc gcattcgagc
     1921 tcgttcgcac tctgataatc gtggcgcttc gaaccaactg agtggaat
//
LOCUS       DATILV010000616        17474 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_917678, whole genome shotgun sequence.
ACCESSION   DATILV010000616 DATILV010000000
VERSION     DATILV010000616.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 17474)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17474)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17474
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_917678"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1028)
                     /locus_tag="VLJ17_14395"
     CDS             complement(<1..1028)
                     /locus_tag="VLJ17_14395"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HSV24203.1"
                     /translation="MTRLLIAAAASVLAGSFAFAESTNQAIVKLDPALDALVSSDAKV
                     ELVKGGFGFTEGPVWVQKGKEGYLLFTDIPGAVVWKLTADGKASVYLENVGYTGPDRW
                     RWGPILNNGKDRNDPQFEEFVMMGADGLTVDRQGRLILATFAGRSLMRIEHNGKRTVL
                     ADRYEGKRFGGPNDVVVKRDGAIYFTDTYGALRLRDKDPKKELDFNAVFRWKDGKLAL
                     MTKEMPNTNGLAFSPDEKYLYVNGSRDNYVNRYEVQADGTLANGKLFIDMRGLTEPGI
                     TDGLRVDTKGNLYETGPGGVWIISPEGKHLGTIRAPEQSTNIGFGDADRKTLYIAART
                     SIYKIRVNV"
     gene            1169..1312
                     /locus_tag="VLJ17_14400"
     CDS             1169..1312
                     /locus_tag="VLJ17_14400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24204.1"
                     /translation="MMIIYRLLALFVAGMMMVVVWRERDRRSQLFAALVFLPFILRAA
                     GVK"
     gene            complement(1508..3193)
                     /locus_tag="VLJ17_14405"
     CDS             complement(1508..3193)
                     /locus_tag="VLJ17_14405"
                     /inference="COORDINATES: protein motif:HMM:NF012862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="caspase domain-containing protein"
                     /protein_id="HSV24205.1"
                     /translation="MRWCLIALLGLIGCLAATQAMAERRVALVIGNAQYAYAPALPNP
                     RNDAQDISDLLKKIGFEVIVGFDLDQANFARTIDDFARALEGADVGLFFYAGHGLQIN
                     DKNYLVSTRAKLESAFLVPSETIELDAIIRLMESKTGTNLAFLDACRNNPLTDNLKRT
                     LAAVNRSTTVGRGLARIEPTGRDTLVAFSSAPGQEAADGHGRNSPFTASLLRHMAKPG
                     LEVSVMLKEVAADVRQETRNTQRPQQVSDMSKTFYFVKAEPVLMTPPPPAATAPPAAS
                     SALVDPVDVVFWQSAAAANDCESIRTYLRLRPTGEFVDLARNYERRLCKAGPEVSSTP
                     PQYPPSGPFAATLSPGPGAPTPPVLSTVTQPANAATNVAVAAPPVAPSSVPPVAPVLP
                     PDLLDVGRKLQRELLRVGCGTSGIEIDGMWGVASREALRSFNERTRSVAVVDRPTPEA
                     LEAVRSRRDRVCPTTCGPGTELRGNACIATPKPQESPRHASRPPEREPPPRTQRDVEP
                     RHTDAPPRQGPGSGSYANVPTLDPRKGESWIYVGKQRCKTYEPPGSPPRIICP"
     gene            3621..3971
                     /locus_tag="VLJ17_14410"
     CDS             3621..3971
                     /locus_tag="VLJ17_14410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24206.1"
                     /translation="MLIYSLIVFTVGASAGLALAAAYVLRQQLAPWPMSLLHAALGVT
                     GLLLLIYPALTTGISMAPLVALLILVIAAMAGIYLASIHARGEIAKKPVVFIHAVVAV
                     IGFLVLLGAVFNMF"
     gene            complement(4023..4289)
                     /locus_tag="VLJ17_14415"
     CDS             complement(4023..4289)
                     /locus_tag="VLJ17_14415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24207.1"
                     /translation="MKIFARLSCRFVGAVAIAARPDAVGAVLHRRRAGTGNTAESSWR
                     ASIACAIRRLAVEGGLPFDPAPLPAPGNNAAIYRSGRRNGAQKE"
     gene            4880..7123
                     /locus_tag="VLJ17_14420"
     CDS             4880..7123
                     /locus_tag="VLJ17_14420"
                     /inference="COORDINATES: protein motif:HMM:NF040071.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6351 family protein"
                     /protein_id="HSV24208.1"
                     /translation="MNNKVTYRTASIAVSCGVVASFAAWTEHGWTQTAATSALSIEVL
                     SSRPELVTGGDALVRISGVGAAPQVTVGASDVSGAFRPDQKGGWVGLVEGLKDGSNQL
                     VAKSGGKEATLTVVNHSVNGTLFAGPQQEPFICENESHGLASPNDNSCAAPTTVKYFY
                     RNKSGEWKQLDPKAARPADVAITKTTEGREVSLIVRQEKGVINRSAYLINVLHDPTAG
                     PLPTATTASPASGWNGKLIYSFGGGVQANYHMGRSLGMMTGTDQKFYIEDLGGGFLDY
                     FIAGGYAIAAGSLNVMGTNNDDVKSAETVAKIKEHFIEEFGPPLFTIGHGASGGSMQQ
                     HMIGNNYPGLLDGIMPARSYPDVMSFLQPLYDCELLEHVFNTSSNSWSTEQKGAVAGK
                     YWGYCVGNGTRYPNARPTNCDATVKDEVANDPKLKAKDVRCTYQDNLVSTFGIDPKTG
                     FARNPFDNVGVQYGLQALNDGKITFEQFIEVNARVGGLDIDGKIVPQRMVGDPIALRR
                     AYEAGRVNAADGGLASIPIVDIRSYVDGAPPAPFDALKDVDVHDGYHSAVMRARLIKS
                     NGNAANHVMITVASLGRVQTDTRTAGSPLTRISGEALAQLDKWLTNIANDKSDQPKVK
                     KVAANKPADFVDACYPTVAGPRVGVIEKLTDQEHCRKLFPFAGDARLAAGAPASDDIF
                     KCALKPVDMADYKIAPTTERSARLKQLFPDGVCDYSKQGVEQARLIGTWVSFKGNGEF
                     AALEPRR"
     gene            7340..7897
                     /locus_tag="VLJ17_14425"
     CDS             7340..7897
                     /locus_tag="VLJ17_14425"
                     /inference="COORDINATES: protein motif:HMM:NF013487.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSV24209.1"
                     /translation="MPMFRVLLKLRNGYAVAWLAAGIVPALAVAIAGPSTARSEDRVP
                     GLTGTDRPDEVVQARQLLMDGIETEMGVIELALEGKAPPFDDLKARADRISTLLTAFP
                     HLFPPQTKPGVAADGPPSLTTATLALWQDFDAFYGFAKGAANTAYDASQAGTADQFRE
                     QAKKLRAACDDCHTKYMHVDTPARP"
     gene            8100..8984
                     /locus_tag="VLJ17_14430"
     CDS             8100..8984
                     /locus_tag="VLJ17_14430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24210.1"
                     /translation="MKVVAKVVLFAATGAAMVGVDGQSAVGQYTPANTGWWGTEIPAK
                     DIDPAIRAAADALGLIRDTRLVIGQVNLLEYVGSGTMVDVESTPPGRQIEVSKVSYAV
                     ALQIPASRLDFEAANVRTVRVVKKGRAWNEERPGINPSPSSNAAYRAQAMWLMPHAAI
                     HAAVFASAKKCLDGKTCDVPLQVARENGKTVLTTAVNGISYQTTLDPSNRPERVEATI
                     ALPGGASKKVVSIYSAYSNGQSLGQTALDKFHTGTYWPGRIVQEIDGAKVLDITLTEG
                     WSNPYQIFPEPELLAKGR"
     gene            9194..9601
                     /locus_tag="VLJ17_14435"
     CDS             9194..9601
                     /locus_tag="VLJ17_14435"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HSV24211.1"
                     /translation="MRESTLLVGLFGVGLVVATTTQAHHAVQAQFDVNKQESFVGVLT
                     KVDWINPHAWFHFDVKKEDGTVEQWATETIGPNGLRRLGLSDRRLFVIGETYKVDYNP
                     DRSGAHYGFTNAFTFPDGKYVKVGFIDENGISK"
     gene            9656..10501
                     /locus_tag="VLJ17_14440"
     CDS             9656..10501
                     /locus_tag="VLJ17_14440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24212.1"
                     /translation="MHAPLSQLGVATLAAVCAMLPGSLSAQTRPDFSGIWAGGVAKLT
                     PTTCKTSVDAFPLRNGDERFKANGATGTQQYITFEQDCAIAHRGLINKPQYKPEYWEK
                     VRLHDYHANAGGKWIDYADPEWKNLPRGLPRIGPPNKIVQTADEVVFLYEYQNTFRVV
                     PTDCREHDPVLKYDQTYYGLAVGCWEGDTLVVTSMGFTDVTWLDWPGYFHSAEMKVTE
                     RLRREGDTLFYAVTVDDPVMFLEPWVMPTRRLNLNKTPGLQLMQDIPYQDHSLGKLVD
                     PENRG"
     gene            10721..11242
                     /locus_tag="VLJ17_14445"
     CDS             10721..11242
                     /locus_tag="VLJ17_14445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24213.1"
                     /translation="MELLAWLEQTDFSVWLRESDWGHPIVLCFHAVGMGVVVGISLMY
                     SARILGYAKDFPLSAFNRLFGLGWFGFAMNAVSGVLLLAGEPRRLMDTPAFWIKMILI
                     VFAGLALWALNKALYATPDDAVDSLGLDSDSVGGAVVSQRARIAAICAAVFWLGAITA
                     GRLIGYTIGPPPL"
     gene            11282..11785
                     /locus_tag="VLJ17_14450"
     CDS             11282..11785
                     /locus_tag="VLJ17_14450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24214.1"
                     /translation="MTEGEVLHWIKELPLGAAVRESRWLFAMGETFHFIGLCLMVGGL
                     LIVDLRLLGFIRSVPVRAALAFLPLVIVGFLINLASGIEFFVTDPFMYWPSPAFRLKL
                     TLILVAGLNALLFHVMEHRRMLILADGKNTSAYVKLTAGLSLSLWLCVLLLGRLLPAF
                     EGSTSFF"
     gene            complement(11939..12742)
                     /gene="uppS"
                     /locus_tag="VLJ17_14455"
     CDS             complement(11939..12742)
                     /gene="uppS"
                     /locus_tag="VLJ17_14455"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015599760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl diphosphate synthase"
                     /protein_id="HSV24215.1"
                     /translation="MTDEQPPRSHVLAALYRIYERRLARQVRAQPVPRHVGVILDGNR
                     RYGRQRQLTAPEEVYTVGANKLDDLLNWCVELGIPAVTLWVLSTDNLARKPEEVSGIL
                     AAIETKLLELAKAPQIHRQRVRVRAIGRLDLLPAPTLAAVRAAESATQDYDGLRLTIA
                     AAYGGRQEITDAVQSFLREQLKKGKTLEDVIDAVTPYAVGRHIYSPDLPDPDLIIRTS
                     GEIRLSGFLLWQSTTSEFYFSEVNWPAFRKIDFLRAIRSFQGRTRRHGL"
     gene            complement(12816..13925)
                     /locus_tag="VLJ17_14460"
     CDS             complement(12816..13925)
                     /locus_tag="VLJ17_14460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSV24216.1"
                     /translation="MQSARVVSLSPVLTIVVPTLNERDNIKPLIALLDAALPDVHWEV
                     MFVDDDSTDDTAKHIRGLARIDPRVRCIQRIGRRGLSTACVEGVLASSAPYVAVMDAD
                     LQHDEALLPRMLEILQEEPIDLVIGSRYAAGGGLGAWASPRAKISQVATKLARLICKQ
                     NITDPLSGFFMCRRDVFERAVRRLSGQGFKILLDLLASSPHLLRVRELPFEFRSRRHG
                     ESKLDTLVAWEYLVLLVDKLMGQIVPIRFALFASIGMVGLAVHMLTLWSGLKFMMLEF
                     EAAQSLATLAAMTSNFFLNNILTYRDQRLHRWRLLRGLLTFYGICAIGATANVGIASY
                     LFSAHQKWWVAGVLGVIVGAVWNYAMSSIFTWRAS"
     gene            complement(14002..14982)
                     /gene="rfaD"
                     /locus_tag="VLJ17_14465"
     CDS             complement(14002..14982)
                     /gene="rfaD"
                     /locus_tag="VLJ17_14465"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008712 - ADP-glyceromanno-heptose
                     6-epimerase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HSV24217.1"
                     /translation="MLLVTGGAGFIGSNVVADLNEAGRTDVVVNDTLGLEGKWRNLQK
                     RRLADFIPPADLSVWLQGRKLDAVIHLGAISSTTAIDGDQVIENNFRLSLRLLDWCTC
                     ARTPFIYASSAATYGNGEVGFVDDNALPALTKLRPMNLYGWSKHLFDLAVLDRAAKKQ
                     PLPPQWVGLKFFNVYGANEYHKGEMMSVLCKVFDKAKAGAPVRLFKSHRAGIADGDQR
                     RDFVYVDDVAAVMRWLIGTPSVNGLFNVGTGKAQSFREMIEAMFAALGRPPNIEYIDM
                     PASIRDSYQYFTQASIENLRGAGYNAGFTPLTTAVRRYVGDFLDRADRYR"
     gene            15234..16736
                     /gene="rfaE1"
                     /locus_tag="VLJ17_14470"
     CDS             15234..16736
                     /gene="rfaE1"
                     /locus_tag="VLJ17_14470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase"
                     /protein_id="HSV24218.1"
                     /translation="MTSFETVLDQFRRKRVLVVGDIMLDRFVYGTVSRISPEAPAPVL
                     ETTGPLDIVGGAGNVVRNIVSLGAACEIIAVVGRDDAAQSIRRHLRDIDVSTDGLIEV
                     EGRVTTVKTRFVAYLHNTHLLRADTEETTPVSHQVEDATIAAMDRRIDAVDVVVLSDY
                     AKGMLTPRVAAAVIAAAKRAHKPVIVDPKGLDYSRYRGATALTPNVGELAQALGRPVK
                     NDETAVKAAANSLAEQIGCDSVLVTRGERGMLTVSRDGEMASFDATAKRVVDVSGAGD
                     TVVASFALALVSDAGVRNAARLANVAAGVVVAKKGTSQVTANELRDLLLSRPHFELRE
                     KVKDLEAITDCVAAWRREGLTVGFTNGCFDLLHPGHVQLLCEARSYCDRLVVGLNNDA
                     SVKRLKGASRPVQAETARSIVLAGLAFVDAVVLFADDTPLELIGCIKPDVLLKGADYR
                     IDQVVGRELVESYGGRVVLVELLPDSSTTRIIDRLKTNAANAASSLAEVK"
     gene            16885..>17474
                     /locus_tag="VLJ17_14475"
     CDS             16885..>17474
                     /locus_tag="VLJ17_14475"
                     /inference="COORDINATES: protein motif:HMM:NF018877.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AGE family epimerase/isomerase"
                     /protein_id="HSV24219.1"
                     /translation="MRCSDFHGLSWLTDHAWPLWLELGVDWPRRAFHEHLDAASLQCE
                     APFRRLRVAARQTYVFSKAARYGVPRAKEAVALGLDFLRGPARLPDGGFAWRFDLDNR
                     PIDSTRDLYDHAFVLLAFAAAADVVGADGVRADAAALVDYITAQFAHPSGGYRDSIPS
                     TATRRQNPHMHLFEALLAASDAFRELRFFNRASDLAT"
BASE COUNT         3401 a         5281 c         5361 g         3431 t
ORIGIN      
        1 acgttcacgc ggatcttgta gatgctcgtg cgcgcggcga tgtagagcgt cttcctgtca
       61 gcgtcgccga agccgatgtt ggtcgactgc tcgggcgcgc ggatggtgcc gaggtgcttg
      121 ccttcgggcg agatgatcca cacgccccca ggacccgtct cgtagagatt gcccttggtg
      181 tcgacacgca gcccgtcggt gatgccgggc tcggtgagcc cgcgcatgtc gatgaacagc
      241 ttgccgttgg cgagcgtccc gtccgcctgt acttcatagc gattgacgta attgtcgcgg
      301 ctgccgttga cgtagagata tttctcgtca ggcgagaagg cgaggccgtt ggtattgggc
      361 atctccttgg tcataagcgc gagcttgccg tctttccacc tgaacacggc attgaaatcg
      421 agttccttct tgggatcctt gtcgcgcagg cggagcgcac cataagtgtc ggtgaaatag
      481 atcgcgccat cgcgcttgac cacgacgtcg ttggggccgc cgaagcgttt gccttcgtaa
      541 cggtcggcga gaaccgtgcg cttgccgttg tgctcgatcc gcatgagcga gcggcccgca
      601 aaggtggcaa ggatcagacg cccttggcgg tcaaccgtga gaccgtcagc gcccatcatc
      661 acgaattcct cgaactgcgg atcgttgcgg tccttgccgt tgttcaagat tggaccccac
      721 cgccacctgt cgggaccggt gtagccgacg ttttcaagat acaccgaggc cttgccgtcc
      781 gccgtcagct tccataccac ggcacccggg atgtcggtga acagcagata gccctctttg
      841 cccttctgca cccacaccgg accttcagtg aagccgaagc cgcctttcac gagttcgact
      901 ttggcgtcgg acgagaccag cgcgtcgagc gccggatcga gctttacgat ggcctggttt
      961 gtagactctg cgaatgcaaa agaacccgcg agcacgctcg cagccgcagc aatcagcagc
     1021 ctggtcatat tttcctcccc ctcgggtgtc gccgaacgcg gcggcccgct ttttcacctc
     1081 cggccgaggt gtcattgcgt gtgtctcaac cctaagccag gatggggaat gagaaaagga
     1141 gagcttcata ccatccgccg agctcggctt gatgatcatc tatcgattat tggcactgtt
     1201 tgtcgctggc atgatgatgg tggtggtgtg gcgcgaacgc gaccggcgct cgcagctttt
     1261 tgccgcgctg gtgttcttgc ctttcattct acgcgcggcg ggagtgaagt gatgctggcc
     1321 ggcgagccgc gtgcccgggc cctcgctttt tccctcgccg cattgtcggt ggccggcgct
     1381 gcgggacccg cgcggcggtt cctattggtc acggccgagc tgccgataat cggtgcaatg
     1441 tgccctcccg atcgagatcg ccgggacaag cccggcgatg acgttgaagg aatgtcagtg
     1501 gacgctccta ggggcaaata atgcgcggcg gcgaccccgg tggctcgtag gtcttgcagc
     1561 gctgctttcc cacatagatc caggactcgc ccttccgagg gtccagcgtg ggtacgttgg
     1621 catatgatcc ggaccccggc ccctgccgcg gtggggcgtc ggtgtgcctc ggttcgacgt
     1681 cgcgttgcgt ccgcggtggc ggctcgcgct cgggtggccg cgaggcatgg cgggggctct
     1741 cctgcggctt cggggttgcg atgcaggcgt tgccgcgcaa ttccgtaccg ggcccgcacg
     1801 tggtcggaca tacccggtcc ctgcggctgc gcaccgcctc gagagcttcc ggtgtgggcc
     1861 ggtcgaccac ggcgaccgag cgcgtgcgct cattgaacga ccgtaacgct tcgcgcgacg
     1921 caacgcccca catgccgtca atttcgattc cgctcgtccc gcatcccacg cgcaacaatt
     1981 ctctctggag tttgcggccg acatcgagga gatcaggcgg cagcactggg gcaacaggcg
     2041 ggaccgacga gggcgcaacc gggggggcgg caacagcgac attggtcgct gcattggcgg
     2101 gttgggtgac cgtggacagg acaggcggcg tcggggcgcc gggtccaggc gacagcgttg
     2161 ccgcaaaggg cccggacggc gggtattgcg ggggggtaga cgaaacctcg gggccggcct
     2221 tgcacagccg ccgctcgtaa ttgcgggcga ggtctacgaa ctcgccagtc gggcgtaggc
     2281 ggagataggt gcggatggat tcacaatcat tggcagcggc ggcagactgc cagaacacca
     2341 cgtcgacggg atccacgagg gccgacgatg cagccggcgg tgccgtggcg gctggcggcg
     2401 gcggcgtcat gagcaccggt tcggccttga cgaaataaaa cgtcttggac atatcgctca
     2461 cttgctgtgg gcgctgcgtg ttacgggttt cctgacgcac gtcggccgca acttctttga
     2521 gcatcaccga tacctccagg ccaggcttcg ccatgtgccg cagcagcgac gcggtgaacg
     2581 ggctgttgcg gccatggccg tcggccgctt cctggccggg cgcagaggag aaagccacca
     2641 gggtatcgcg accggtcggc tcgatgcggg cgaggccgcg gccgaccgtg gtcgagcgat
     2701 tgacggccgc gagggtgcgc ttgagattgt cggtcagcgg gttgttgcgg caggcgtcga
     2761 ggaaggccag gttggttcca gtcttggatt ccatgagccg aataatcgcg tcgagctcga
     2821 tggtctccga gggcacgaga aacgcgcttt cgagcttcgc ccgcgtcgaa accagatagt
     2881 tcttgtcatt gatctgcagg ccatggcccg catagaagaa caatccgacg tcggcacctt
     2941 cgagcgcacg ggcgaaatcg tcgatggtac gggcgaaatt ggcctggtcg agatcgaacc
     3001 ccacgatcac ttcgaaaccg attttcttaa gcaaatcaga aatatcctga gcgtcattgc
     3061 gcggattggg cagcgccggg gcgtaggcgt actgtgcgtt tccgatcacc agcgccacgc
     3121 gccgctccgc catggcctgt gtcgccgcca ggcaaccaat aaggccgagc agggctatca
     3181 gacaccatcg cattgcatcc tccggcgaac agcaaagccg gcaaacaaga tggccgtcgc
     3241 atcgcgcccc aattgcgcgc ccgcgactca tccggattgc ggtagttatt agtatcttgc
     3301 cagcgcaaaa agttcaccac caagcacttt gctgccgcaa tttcagcttt tttgccgcac
     3361 cccttcgtgc aaaaccgatg tagggctgcc ctgccggcag caattcgacg tgcgccatcg
     3421 cgctttttgc gcacgcgcca tgtaccccgg acaaaccgcg caccccggat aagccgcaac
     3481 gaaccgccga ctaaaagtac gggtggttaa aggaccttgg tctacttcca atcatcgtgg
     3541 taacgcctca ttcttcggcg agccgtaatg ctgccgatgg acctgagccg caggaggacc
     3601 tgtcgcaata ccagaatagc atgctcatct attctctcat tgtattcacc gtcggtgcct
     3661 ccgctggatt ggcgctcgcc gcggcctacg tgttacggca acagcttgca ccttggccaa
     3721 tgtcgttgct gcacgcggcg ctaggcgtca ccggactgct tctgctcatt tatcctgcac
     3781 tcacaaccgg catctcgatg gcgccgctgg tcgcgctgct gatcctggtc atcgcggcaa
     3841 tggccggtat ttatctggcc tcaatccatg cgcgtggcga gatcgcgaag aaaccggttg
     3901 tatttatcca tgccgttgta gccgtgatcg gttttctcgt actgctcgga gcggtcttca
     3961 atatgttctg acaacaacat gcagctttgg ggccagccga tccaaccctg tcgtttcccg
     4021 aactattcct tttgtgcgcc gttgcggcgc cctgatctgt agatcgcggc gttgttgccc
     4081 ggcgccggta gtggcgcggg gtcgaacggc aagccccctt ccacggcgag ccgccggata
     4141 gcacatgcaa tagaggcacg ccagcttgac tcagccgtgt tgccagtccc ggcgcgccgg
     4201 cggtgcaaga cagcacccac ggcgtcaggc cgggctgcaa tggcgactgc gccgacgaac
     4261 cggcatgaca atcgagcgaa aatcttcacg gcggacctct ctgcttcctc caaagtcagc
     4321 tgtcagcgga agcgagtgtt ccaagtacca ttggcgcaca catggatctc ttgccggccg
     4381 aactcgccga atgagagagt ataggactcg ccgtccctat acgtcttgcc aaatgcttga
     4441 catccgctgc gcgcagcgtc agctcggttc acaacagcta agacagccaa actgaggaaa
     4501 agtatgaacg caaatctggc catgacagat ctcctacgaa tcttcctctg agcttgttta
     4561 tcttcctgtg ggcgtctccg ggtggaaaat atcatcggat gcagctgccc ttcaatgcgt
     4621 tgttgcccaa tgcgaaggcc aagcgaacga tagttcctcg ctcagccgtc gctcgatgga
     4681 gatgatgtag attctctgca tttgatcgta gagcggtctt gaagcgacgc gggcggcacc
     4741 gccgcccttg catccgcagc ggtcatttcc tgttcgcggg taacggtcct tcggataccc
     4801 ggccgcacat tgctccgcag tggttccagg tctattttcg caccaacaaa gagagattga
     4861 acgatggagg gaggtgcaag tgaacaataa ggtcacctac cggacggcgt ctattgcagt
     4921 cagttgcggg gtggtcgcga gcttcgcggc gtggactgag cacggctgga cgcagacggc
     4981 ggcaacgagc gccctcagca tcgaagtcct gtcctcgcgc cctgaacttg tgaccggcgg
     5041 cgacgcgctg gtccgcattt cgggcgtcgg tgctgcaccc caagtgacgg tcggcgccag
     5101 cgacgtatcg ggcgcgttcc ggcccgatca gaagggcggc tgggtcggcc tggttgaagg
     5161 gctcaaagac ggcagcaatc aactggtcgc caagtccggc ggcaaggagg cgacgcttac
     5221 cgttgtcaac cattcggtga acggcacttt gttcgccggg ccgcaacagg aaccgttcat
     5281 ctgcgagaat gagtcccatg gcttggcctc gccgaatgac aactcatgcg cggcgccgac
     5341 gacggtcaaa tatttttatc gcaacaagag cggcgagtgg aaacagctgg accccaaggc
     5401 cgcgcggccg gcagatgttg caatcaccaa gaccaccgag ggccgggagg tttcgctcat
     5461 cgtccgccag gagaagggcg tcatcaaccg ttcggcttat ctgatcaacg tgttacacga
     5521 tccgaccgcc ggaccgctac cgaccgcaac gacggcttcg cccgcgtcgg gatggaacgg
     5581 aaagctcatt tacagcttcg gcggaggagt ccaggccaat tatcacatgg gccgcagcct
     5641 cggcatgatg accggcaccg accagaaatt ctacatcgag gatctgggtg ggggatttct
     5701 cgactatttc atcgccggtg gctacgccat cgcagccggc tcgctcaatg taatgggcac
     5761 caacaacgat gacgttaaat cggctgagac ggtggccaaa atcaaggagc acttcatcga
     5821 ggagttcggt ccgccgctgt tcaccatcgg ccatggcgcc tccggcgggt cgatgcagca
     5881 gcacatgatc ggcaacaact acccgggtct gctcgacggc atcatgccgg cacgcagcta
     5941 tccggacgtc atgagcttcc tacagccgct ctatgattgc gagttgctgg agcacgtctt
     6001 caatacgtcc agcaactcgt ggtccaccga gcagaagggc gcggtggccg gcaagtactg
     6061 gggctattgc gtcggcaatg gcacgcgcta tccaaacgcc cggccgacca actgcgatgc
     6121 gaccgtgaag gacgaagttg cgaacgatcc gaagctcaag gcaaaagacg tgcgctgcac
     6181 ctatcaggat aatctggtca gcacgttcgg catcgatccc aagaccggct tcgctcgcaa
     6241 tccgttcgac aatgttgggg tgcaatacgg cctgcaggcg ctaaacgatg gcaagatcac
     6301 gttcgagcag tttatcgagg tgaacgctcg ggtcggcggc ctcgacattg acggaaagat
     6361 cgtgccgcag cgcatggttg gcgatcctat cgcattgcgc cgggcttatg aggccggtcg
     6421 tgtcaacgcg gccgatggcg ggcttgcgtc tataccgatc gtcgacatcc gttcctatgt
     6481 ggacggcgcg ccgccagcgc cgttcgatgc cctgaaagac gtcgatgtgc atgacggcta
     6541 ccacagcgcc gtcatgcggg cccggcttat caagagcaac ggcaacgccg ccaaccacgt
     6601 gatgatcacg gtggcgagcc tcggccgtgt ccagaccgac acccgcacgg ccggctcgcc
     6661 cctgacccgc atctcgggcg aagcgctggc ccagctcgac aagtggctga ccaatatcgc
     6721 caacgacaaa tcggatcagc ccaaggtcaa aaaggtcgcg gccaacaagc cggctgattt
     6781 cgtcgacgcc tgctacccga cagtggcagg tccgcgggtt ggggtgatcg aaaagctcac
     6841 cgaccaggag cactgcagga agctgttccc gttcgcaggc gatgcgcgcc tggcggcggg
     6901 cgcaccggcc tccgacgata tcttcaaatg cgcgctcaag ccggtcgaca tggcagacta
     6961 caagatcgcc ccgaccacgg agcgctcggc ccgactcaag cagttattcc cagacggcgt
     7021 gtgcgactac agcaagcagg gggtcgagca agcgcgcctc atcggcacct gggtgtcgtt
     7081 taagggcaac ggcgagttcg cggctctgga accacggcgc tgacggcttg ttcctgggag
     7141 cgcaggcgtc ccgcccactc taagataaag agcgggggga tgcccgcgcg ccccatgcga
     7201 tcaccgggcg tgtgaaacgg gcttcacgcg cagttggcag taacgtaata tgccgtcgcg
     7261 cccccaattg aatgcttgga ttgaacaccg attgccggtg gcgtaagcgc gtttgtgccg
     7321 ccgcttcgcg agggaggtaa tgccgatgtt tcgagtgctg ctgaaattgc ggaatggtta
     7381 tgcggtcgcc tggctcgccg cggggatcgt gccggcgctc gcggttgcga ttgcaggtcc
     7441 atcgacggcg cgcagcgagg atcgcgtccc gggactgacc ggaaccgatc ggcccgacga
     7501 agttgtgcag gcccgccagt tgctgatgga cggcatcgaa accgagatgg gcgtgatcga
     7561 actggccctg gaaggcaagg cgccgccgtt cgacgatctg aaagcgcgtg ccgaccgcat
     7621 cagcacgttg ttgaccgctt tcccgcatct gttcccgccg cagaccaaac ccggcgtagc
     7681 ggccgacggc ccgccgagcc tcaccacggc aacgcttgcg ctatggcaag acttcgatgc
     7741 cttctacggc ttcgccaagg gcgcggccaa cactgcctat gatgcgagcc aggccggcac
     7801 cgctgaccag ttcagggagc aggcaaaaaa actacgtgcc gcctgcgatg actgccatac
     7861 gaaatacatg cacgtggaca ccccggcgcg cccataaatt cggctcgaaa tgtaggtgcg
     7921 acgaaatgcc tgccgtgttg acggagtgct gatattcatc caacgtcatt gccgagctta
     7981 ccaatccacc ttcgcgcgaa gaaagactcg cctgcagatg acggacgaaa ggtggatcag
     8041 ttttaccgag acatgctcta aactaaacaa aaaacgttat cttgccggag gaaaatgttg
     8101 tgaaagtcgt tgccaaagtc gttctgttcg ccgcgacggg agcggcgatg gtgggagtgg
     8161 acggtcaatc cgctgtcggt cagtacacgc cggcgaatac cggatggtgg ggcactgaaa
     8221 ttcccgccaa ggacatcgat ccggccatcc gggcggcggc cgacgcgctc ggcctaattc
     8281 gcgacacgcg gttggtcatc ggccaggtca atctgcttga atatgtcggc agcggaacca
     8341 tggtcgatgt ggaatcgacg ccccccggcc ggcagatcga agtcagcaag gtcagctacg
     8401 cggtggctct gcaaattcca gccagccggc tcgatttcga agccgcgaat gtgcggacgg
     8461 tgcgggtggt caaaaaaggg agggcctgga acgaagaaag gccggggatc aatccgtcgc
     8521 cgtccagtaa cgcagcctac cgtgcccaag cgatgtggct gatgccccac gccgccatac
     8581 atgccgctgt gttcgcctcg gccaaaaagt gcctcgacgg caagacatgt gacgtccccc
     8641 tccaggttgc cagggagaat ggtaagaccg tgttgaccac cgcggtgaac gggatatcgt
     8701 accaaactac gttggatccc agcaaccggc cggaacgagt cgaggccacg atcgcgctac
     8761 cgggcggcgc gtccaagaag gtcgtctcga tatattcggc ttacagcaac ggccagagcc
     8821 tgggccaaac cgcgctcgac aaattccaca ccggcaccta ttggccgggg cggatcgttc
     8881 aggaaatcga tggcgccaag gtgctggaca tcaccttaac ggaaggctgg tcaaatccgt
     8941 atcagatctt tcccgagccg gagctgctgg cgaaaggcag atagcggagc tcatccgatg
     9001 tggtcgaatc accctcctcc atcatgccca cgcagagaca tcgcgccgcg tcgcggccgg
     9061 gaccttcgcg gggatctacc ctttgttgca gcgcttcaga aagcgaggcg tggaaggccc
     9121 tgggatttga aaagatagtt taacatggaa ttcgctgtga ttttcgagtg aacgaaaaat
     9181 aaacggagga actatgcgcg agtctaccct ccttgtcggg ctgttcggcg ttggattggt
     9241 agtggccacg acgacgcaag ctcatcacgc cgtgcaagcc caattcgacg tcaacaagca
     9301 ggaaagtttt gtcggcgttc tgacgaaggt cgattggatc aatcctcatg cctggttcca
     9361 cttcgacgta aagaaagagg atggaaccgt agagcaatgg gccaccgaga cgattggtcc
     9421 gaacggcctg cgtcgactcg gtctgagcga ccggagattg tttgtgatcg gtgagaccta
     9481 caaggtcgac tataatccgg accgctccgg tgcccactat gggttcacta atgcgttcac
     9541 gttcccggac ggaaaatacg tcaaggtcgg tttcatagac gaaaacggta tttccaagtg
     9601 atgccaaagg tcgacctgcc cggtcgacat caggcaacaa cggaggacct ccctaatgca
     9661 cgcgcccctt tcgcaactcg gcgtcgcgac tttagctgcc gtatgcgcga tgcttccggg
     9721 ctcgctctcc gcccaaaccc ggcccgattt tagcggtatt tgggccggcg gcgttgccaa
     9781 actgacgcca accacctgca agacctccgt tgacgccttt ccgttgcgca acggcgatga
     9841 gcgtttcaag gcgaacgggg cgaccggcac ccagcagtac atcacgttcg agcaggattg
     9901 cgccattgcg catcgcgggc tcatcaacaa gccgcaatac aagcccgaat actgggagaa
     9961 ggtgcggctg cacgactatc acgccaatgc gggcggcaag tggatcgact atgcggatcc
    10021 cgagtggaaa aatcttccgc gcggccttcc gcgcattggt ccgccgaaca agatcgtgca
    10081 gaccgccgac gaagtggtct ttctctacga ataccagaat acgtttcgcg ttgttccgac
    10141 cgattgccgc gagcacgatc cggtgctgaa gtatgatcag acatattatg gcttggcagt
    10201 cggctgctgg gaaggcgaca cgctggtggt gacgtcgatg ggatttaccg acgtcacctg
    10261 gctcgattgg cccggctatt tccatagtgc cgagatgaag gtcacggagc ggctgcgccg
    10321 cgaaggcgac acgcttttct atgccgtcac ggtcgatgat ccggtcatgt ttctcgaacc
    10381 ctgggtcatg ccgacgcgaa ggctcaatct caacaagact cccggcctgc agttgatgca
    10441 agacatcccc taccaggacc attcgcttgg aaagctcgtc gaccctgaaa atcgcggcta
    10501 aagtgagttc cgatgaaatt ggcgcgtagg gtgggcaaaa acacctgctg cgacgatcga
    10561 gattatccgg tcgctgcagt cgattttgtc cacgcggtcg gaacgatagg ccgaaccgcg
    10621 tgggcaacgc gcctctacgc tcacgcacgc aatgcaacgg cacgaggtgg gcgcgttgcc
    10681 cactctaccg aacgcgtgct cgctggatac atctggttgc atggaactac tggcttggct
    10741 tgagcagacg gacttttcgg tctggttacg ggaatcggat tggggacatc ccatcgtgct
    10801 gtgctttcat gcggttggca tgggggtggt ggtgggcatt tccctcatgt acagcgcccg
    10861 catcctggga tacgcgaagg actttccgct gtcggcgttc aatcggctgt tcgggcttgg
    10921 gtggttcgga tttgccatga acgccgtttc tggtgtcctt ctgctcgccg gcgagccgcg
    10981 ccgtctgatg gacacacctg ccttctggat caagatgatc ctgattgtgt ttgccggtct
    11041 tgcgctgtgg gcgttgaaca aagccctgta cgcaaccccc gacgacgcag tcgattcgct
    11101 agggttggat agcgattcgg tcggtggagc cgtcgtctcg cagagggcgc gaatcgcggc
    11161 gatttgtgcg gccgtgttct ggttgggggc aatcacggca ggccggctca tcggatacac
    11221 catcggtccg ccgccgctat gatatggcgt gatccggccg ttgcattcgg aatatcatga
    11281 catgacggag ggagaggttc ttcactggat caaggaattg cccctcggcg ccgctgttcg
    11341 ggagagccgg tggttgttcg cgatggggga aacgttccac ttcatcggcc tctgcctgat
    11401 ggttggagga ttgttgatcg tcgacctgag attgttgggt ttcatccgca gcgttccggt
    11461 gcgagcggcg cttgcctttc tgccgctcgt gatcgtcggc ttcctgatca atctcgcaag
    11521 cggaatcgag ttcttcgtaa cggatccttt catgtactgg cccagcccag cgttcaggtt
    11581 gaagttgacc ctgatcctgg tcgccgggct caacgccctc ctcttccacg ttatggaaca
    11641 tcgccgtatg ctcattcttg cggatggcaa aaatacgagc gcgtacgtca agctcaccgc
    11701 ggggctttcg ctgagcctgt ggctttgcgt gctgctgctc ggccgcctgt taccagcgtt
    11761 cgaggggtcg acgagctttt tctgaaatga gcatgagtag gacgggttga ttgctaaacc
    11821 catcaggggc gttcagtggc ggcacggatg ctgattgggt tttgccatcg cccgtcgaag
    11881 atgggcgtaa acgccctaat agctcaaccc atcctacgca aagctgtata gcgcgccctc
    11941 acagcccatg ccgtcgcgtc cggccctgga acgaacggat cgcccgcaag aagtcgatct
    12001 tgcgaaacgc cggccagttc acctcggaga agtaaaattc cgaggttgtg ctttgccaca
    12061 gcaagaatcc cgagagccgg atctctccgc tggtgcggat gatgaggtcg ggatcgggca
    12121 gatccggcga gtagatgtgc cgcccgactg cgtaaggggt cacggcgtcg atgacgtcct
    12181 ccagcgtttt gcctttcttc aactgctccc gcagaaatga ttgcaccgcg tccgtgatct
    12241 cttggcgccc tccataagca gccgcgatgg tgaggcgcag accatcataa tcctgtgtcg
    12301 cgctttcggc ggcgcgcacg gcggcaagcg tcggggccgg caacaaatcc agccggccga
    12361 ttgccctaac gcggacgcgc tggcgatgaa tctggggcgc cttggcgagt tcgagcaatt
    12421 tggtttcgat agccgccagt atgccggaca cttcctctgg tttacgcgcg aggttgtcgg
    12481 tcgaaagcac ccataacgtc acggcgggaa tgccgagctc gacgcaccag ttgagcaggt
    12541 cgtcgagctt gttggcgccg acggtataga cctcttcggg ggcggtcagt tggcgctgcc
    12601 ggccgtaccg ccgattgccg tccaaaatga cgccgacatg gcgcggcact ggctgcgccc
    12661 gcacctgtcg cgcgagccgg cgctcgtaaa tgcgatagag cgcagccagc acgtgcgacc
    12721 gcggtggttg ctcgtcagtc atttgacgtc ggtattattc tgccgggctt gccccacccg
    12781 ctagacttgc atggttatcc ggcaaatgcc agccgtcagg acgctctcca ggtgaagatt
    12841 gacgacatgg cgtaattcca cacggcgcca acaatgacgc ccagcacacc tgccacccac
    12901 catttttgat gggcgctgaa caggtaggac gcaatgccaa catttgcggt cgcgccaatg
    12961 gcgcaaattc catagaaagt gagaagcccg cgcagcaacc gccaccggtg caacctttga
    13021 tcccgataag tcagaatgtt gttgaggaaa aaattcgatg tcatcgccgc caacgtcgcc
    13081 aacgactgcg cggcctcgaa ttccaacatc atgaacttga ggccgctcca taatgtcaac
    13141 atgtggacgg ccaatcccac cataccgatc gacgcgaaga gggcaaagcg aatgggcacg
    13201 atttgaccca taagcttgtc gaccaagagc accagatatt cccacgccac cagcgtatcc
    13261 agcttgcttt ctccgtgccg gcggctacgg aactcaaagg gcaattcgcg aacccgcaag
    13321 agatgagggg atgacgcgag cagatcgagc aggattttga atccctgccc ggacaggcgt
    13381 cgcaccgcgc gctcgaacac atcgcgacgg cacatgaaaa agccgctcag cggatcggtg
    13441 atattctgct tacagataag gcgggcaagc tttgtagcga cctggctgat tttcgccctg
    13501 gggcttgccc aagcgcccaa gccgccgccg gcagcgtagc ggctcccgat aaccagatcg
    13561 atgggctcct cctggagaat ttcgagcatg cgtgggagca aggcttcgtc gtgttgaagg
    13621 tcggcatcca tgacagccac gtaaggcgca gaggatgcca acacgccctc gacacaggca
    13681 gtcgacaacc cgcgtcgccc gatccgttgg atgcaccgaa cccgcggatc gatgcgcgcc
    13741 agcccccgga tgtgtttggc ggtatcgtcc gttgaatcgt catctacgaa catgacctcc
    13801 cagtgcacgt ccgggagagc ggcatcgagc aacgcgatga ggggcttgat gttgtcacgc
    13861 tcgttgaggg tcggcaccac gatcgtcaag accggggaga ggctgaccac tcgcgcggat
    13921 tgcacctgcg cggccgtaac ctgttccaac tgtccccccc ttcggcgttg cgacgcagtc
    13981 attcagctcg ataagatggc gctacctgta tcgatccgcc cgatcgagaa aatcccccac
    14041 atagcgccgg accgcggttg tgagtggggt gaagcccgca ttgtagccag cgccgcgcag
    14101 gttctcgatc gaggcctgag tgaagtactg atagctgtcg cggatcgagg ccggcatgtc
    14161 gatgtattca atattagggg gccggccgag cgcggcgaac atcgcctcga tcatctcgcg
    14221 aaagctctgc gctttgccgg tacccacatt gaacaatccg ttgaccgacg gcgtgccaat
    14281 gagccagcgc atcaccgcgg ccacgtcatc gacgtaaacg aaatcgcgcc gttggtcacc
    14341 gtccgcgatg ccggcacgat gggacttgaa taaccgcacc ggagcgccgg ccttggcctt
    14401 gtcaaacacc ttgcaaagca cgctcatcat ctcgcccttg tggtactcgt tcgcgccata
    14461 gacgttgaag aatttgagcc ctacccattg cggcggcagc ggttgctttt tggcggcccg
    14521 atccaggacc gcaagatcga acaggtgttt actccaacca tataggttca tcggccgcag
    14581 cttggtgagc gccgggagcg cattgtcatc gacaaagccg acctcgccgt tcccgtaagt
    14641 tgccgcagag gacgcgtaga tgaaaggcgt gcgcgcgcac gtgcaccagt ccagcagccg
    14701 cagcgacagc cggaagttgt tttcgatcac ctgatcgccg tcgatcgccg tggtcgaaga
    14761 gatcgcaccg agatggatca cggcgtcaag cttacggccc tgcagccaca cggacaggtc
    14821 cgctgggggg atgaagtcgg cgagccgacg cttctgcaag ttgcgccact taccttccaa
    14881 cccgagcgtg tcattgacca cgacatccgt gcgccccgcc tcgttcaagt cggcgaccac
    14941 gtttgatccg atgaagcctg ccccgccggt caccagcaac atttagggtg ctcggtagtc
    15001 gcgtaggacg ggttgaggtc tcgtgaaccc atcatgtgcc cctccgtgcg gcgacgcggt
    15061 cggtgataaa tttcgcaaga gctcaaccca tactccacgg cgccgtgcgg ggcctctttg
    15121 caccattccg aaacaccgcg caacaacgag gacgtggtac aagagactga aatccgctac
    15181 accatcgctc cgaagcctcg ccgcaagtgt ggctcgttaa cgcaagggcg cccatgactt
    15241 cattcgagac cgtacttgac caatttcgcc gcaagcgtgt gcttgtggta ggcgatatca
    15301 tgctcgaccg gtttgtctat ggcacggttt cgcgcatatc gcctgaggcc ccggcccccg
    15361 tccttgagac caccggccct ctggatatcg tcgggggggc cggaaatgtg gtccgcaaca
    15421 tcgtgagtct cggcgctgct tgcgagatca tcgccgtggt cggccgtgac gatgcggcgc
    15481 aatcgatccg ccgccatctc agggacatcg acgtatcgac cgatggattg attgaggtcg
    15541 aggggcgcgt caccaccgtc aagacgcgct tcgtcgccta cctgcacaac acccatctgc
    15601 tgcgggccga caccgaggaa accacgccgg tcagccatca ggtcgaggat gcgaccatcg
    15661 cggcgatgga tcgtcggatc gacgccgtcg atgtggttgt cctttccgac tatgctaaag
    15721 gtatgctgac ccccagggtt gcggcagcgg tcatcgcggc ggcgaagcgg gcccacaagc
    15781 ccgtcatcgt tgatccaaag gggctcgatt actcccgcta tcgcggcgcc accgctctga
    15841 cccccaatgt cggagaactg gcccaggctt tgggccgccc cgtcaagaac gacgagaccg
    15901 ccgtaaaggc ggccgccaac tccctggcgg agcaaattgg ctgcgatagc gtgttagtga
    15961 cgcgcggcga acggggcatg ctgaccgttt cacgtgacgg cgagatggcg tcgttcgacg
    16021 cgaccgccaa gcgcgtcgtc gacgtgtccg gtgccggcga tacggtggtg gcgagcttcg
    16081 ccctcgcgct ggtcagcgat gcgggggtcc gcaatgcggc gcggctcgcc aatgtggccg
    16141 ccggcgtcgt cgtcgccaag aaagggacgt cgcaggtcac tgcaaatgaa ttgcgcgatc
    16201 tgctgctgtc acgcccgcat tttgaattgc gggaaaaagt aaaggaccta gaggcgatca
    16261 cggattgcgt cgcggcctgg cgccgagagg ggctcacagt gggcttcacc aacggctgct
    16321 ttgatctgct ccatccgggg catgtccagc ttttgtgcga ggcgcgctcc tattgcgacc
    16381 ggctggtggt cggcctcaac aacgatgcct ctgtgaagcg tctcaaaggc gcctcgcgac
    16441 cggtccaagc cgagacagca cgctcaatcg tgctggcggg cctcgcgttt gtggacgctg
    16501 tcgtgctgtt tgccgatgac accccgctcg agctcatcgg ctgcatcaag cccgatgtgc
    16561 tgttgaaggg tgccgactac cggatcgatc aggtggtcgg acgcgagttg gtggagtcct
    16621 atggcggccg ggtcgtgctg gtcgaattgc tcccagattc ctcgacgacg cgcataatcg
    16681 atcgattgaa gaccaatgct gcgaatgctg cgtcgagcct cgcagaggtg aaatgatgtc
    16741 tggattacgc atgttttcgt cattgttcac atgcagccct catcctgagg aaactgcacg
    16801 cttgcacagc cgtcccgaag gacggccacg agtccattcc gtgcatccct cccccaatat
    16861 acccgcaaga gcgcgctcct caggatgagg tgttcagatt tccacggctt aagttggctt
    16921 acggatcatg catggccgct ttggcttgaa cttggcgtcg attggccgcg gcgcgccttc
    16981 catgaacatc ttgatgctgc ttcgctgcaa tgcgaggcgc cgtttcggcg tctgcgcgtt
    17041 gcggcgcgcc agacctacgt gttctccaag gccgctcgct acggagtgcc gcgcgccaag
    17101 gaggcggttg cgctggggct cgatttcctg cgggggccgg cacggcttcc cgatggaggt
    17161 tttgcctggc gcttcgatct cgacaaccgg ccgatcgatt caacgcgcga cctctacgat
    17221 cacgcctttg tcctcctcgc cttcgcggcg gcggccgatg tggtgggcgc cgacggtgtg
    17281 cgcgccgatg cagccgcact cgtggattac attacggcgc aattcgctca tccgtccggc
    17341 ggctatcgcg acagcattcc gtccaccgca acacgccgac aaaatcccca catgcatctc
    17401 ttcgaggcgc tgctggcggc aagcgatgca ttccgtgagc tgcgcttttt caaccgcgcc
    17461 agcgatctcg ccac
//
LOCUS       DATILV010000617         2665 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_655956, whole genome shotgun sequence.
ACCESSION   DATILV010000617 DATILV010000000
VERSION     DATILV010000617.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2665
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_655956"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(297..1169)
                     /locus_tag="VLJ17_14480"
     CDS             complement(297..1169)
                     /locus_tag="VLJ17_14480"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HSV24220.1"
                     /translation="MKHDLEIDLLRSFVAVAVHRNFTRAGQAVGRTQSAVSLQIKRLE
                     GIVGKQLFERTRQSVSVTHMGEALLVYANRILAANDAALSYIQRPEAEGLIRIGAPDD
                     YATFLLPPILAVIEKVHPRLQFEVMCDNACDLLPLLDQGDLDIVVATHRPDAVAGRIA
                     RYEPLHWVASPDYVDDPEAPLSLVLFPTGCVCRDIAMEALQRIDRPWRVAYSTRSIGL
                     MEKALLESAGVSVMESSTIPARLKIIDGQAGFPPLPDVVISVHQPNTSEPHVCIVADF
                     VLAKLGSVVTQEAS"
     gene            1414..2253
                     /locus_tag="VLJ17_14485"
     CDS             1414..2253
                     /locus_tag="VLJ17_14485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003532873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HSV24221.1"
                     /translation="MDRYQQRLTEFARLHRSGSAFLMPNAWDAGTARILEGLGFKALG
                     TTSAGLAFSIGLRDSSGSLSRTQVLDNAHSIVEATSLPVSADLEDGFGASPDDCAQTV
                     RAAEQVGLCGGSIEDATGDSDKPIYSFDLAVERVRAAVAAKTRSEFLITARADNFIYG
                     RPDLEDTIRRLQAFEAAGADVVYAPGLRDIESVKKICRSVSIPVNVVVGLCASTYTVE
                     DLSSVGVRRISTGGSLARAALGEMIRAAQELKDCGTFEYSERAISDAAAARQMRTVAR
                     ASG"
BASE COUNT          589 a          754 c          787 g          535 t
ORIGIN      
        1 ttgcgtttca aacaaggaga gtcggtgatt aatttgcacg cagcgcaagg tatatgccgg
       61 tgcacggggt ggaccggcgc gcaaacaaag tataagcgtg gtcatccgtg gaagtaggtt
      121 ggcagcaggg gcttgtgaga acgtcgcaga atggcgggga gcgcggccgc ccgctgcggt
      181 caatacgaac gaccgtcgtg cggccaaagg tgtcgccgaa taagcggcag ctttcgcgag
      241 cgattcagtc cagagagcaa aatccgattc gatggatcat gctcacgatg aggctgctag
      301 gaagcctcct gcgtgacaac gctacccagc ttcgcaagca cgaagtccgc aacaatgcag
      361 acatgcggct cgctcgtatt cggctgatga accgagatca ccacgtctgg cagaggtgga
      421 aagcctgcct gcccgtcgat aatcttgagc cttgcaggta tcgtcgaaga ctccatgacc
      481 gatacgccag cgctttcgag taaggccttc tccatcagcc cgatgctacg ggtggagtag
      541 gccacacgcc aaggtcggtc gatccgctgc aatgcctcca tggctatatc ccgacaaacg
      601 caacccgtag gaaacaagac aagcgaaagc ggggcttcgg gatcgtccac gtagtcaggc
      661 gaagccaccc aatggagcgg ctcatatctt gcgatccggc ctgcgacggc gtccggccga
      721 tgggttgcaa cgacgatatc gagatcccct tgatcgagca acggcagaag gtcgcaggcg
      781 ttgtcgcaca tcacctcaaa ctgcagccgc ggatggacct tctcgatgac ggccagaatg
      841 gggggcagaa ggaaggtggc gtaatcgtcg ggagcaccga tgcggatgag cccttccgcc
      901 tcgggtcgct gaatgtagga gagcgctgcg tcgttcgctg caaggatgcg gtttgcatag
      961 accagcagag cctcgcccat gtgagtgacg gatactgact gacgggttct ctcaaagagc
     1021 tgctttccca caataccttc gagccgcttg atctggagac tgaccgctga ctgggtgcga
     1081 cccacagcct ggcccgcacg cgtgaagttc ctatgaaccg cgacagccac aaacgaccga
     1141 agcaggtcaa tttcgagatc gtgcttcatg agtcgatatt aactgcgctc attatggtca
     1201 gcaatataat tcgtttatca aatctctgag cctggcctag gctgatttct ggaggtcagc
     1261 aaaatgcttg gcttgcttgc ccagtgcatg ttcgaagcga cacgcatcgc cccttttggt
     1321 agcgccgccg cggcaaagga ctggcggtca ccttcgggac gacccggccg gcgtgcattt
     1381 cccgaatgtc gagaaagtca caaaggaatg gcaatggatc gctaccagca aagattgaca
     1441 gagttcgcgc ggctccaccg ctcgggcagc gcgtttctga tgccgaacgc atgggatgcc
     1501 ggaacggcgc gcattctcga gggactaggt ttcaaggcgc tgggcactac aagtgcggga
     1561 cttgctttct caatcgggct acgcgattcc agcggcagtc tttcccgtac ccaagtgctc
     1621 gacaacgccc actcgattgt cgaggcgaca agcctgcctg tctccgccga tctggaggac
     1681 ggcttcggcg cttcgccgga cgactgtgcg caaaccgtgc gcgcggctga acaggttggc
     1741 ttatgtggcg gttcaatcga ggatgccaca ggcgattccg acaaaccgat ttacagcttc
     1801 gatctcgcgg tcgaacgggt tcgggcagcg gtagccgcaa agacacgatc ggaattcttg
     1861 atcacagcgc gggccgataa cttcatctat ggccgccccg acctcgaaga cacgatccgc
     1921 cggttgcagg ctttcgaggc tgcgggtgcg gatgtggtct atgcaccggg ccttcgagat
     1981 atcgaatccg tgaaaaagat ctgcagaagc gtctcaatcc ccgtcaatgt tgttgtcggc
     2041 ctttgtgctt caacttacac cgttgaggac ctttcttctg ttggcgtccg acgaatcagc
     2101 actggcgggt cacttgcgcg tgcggcactt ggcgagatga tccgagcagc tcaagaacta
     2161 aaggattgtg gaacctttga atactccgaa agagcgatct cggacgcggc cgcggccagg
     2221 caaatgcgaa ctgttgcgcg agcgtcggga tgagtcggcc tttgccctgg agccgacgtg
     2281 gatctgacgt ccgacaccgt gcagaagacg tcccacttgg gctcaatcga gccctcctta
     2341 catgttcatc gcctacggcg gcaacgggtc gatccgtagc cttcctcgaa cccctatgat
     2401 tatgccgata cctgtgagcc ggaggcgaac gcttccggct ctccagaaca gatgccggca
     2461 taatcctgat agcggcacta tggattttat gccgagaacg gcaggctatc tcgataaatc
     2521 gccgcgtacc tcctattatg cgtgaccaaa ctcacgaaga gcagggcaga aggtcatgac
     2581 catcagtcga cattcgatca tggacagcgg caattttcgg ccaatcatca gccgcgccgt
     2641 cgtccacgaa ggtatggtgt atcta
//
LOCUS       DATILV010000618        10395 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1940182, whole genome shotgun sequence.
ACCESSION   DATILV010000618 DATILV010000000
VERSION     DATILV010000618.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10395)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10395)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10395
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1940182"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..768
                     /locus_tag="VLJ17_14490"
     CDS             <1..768
                     /locus_tag="VLJ17_14490"
                     /inference="COORDINATES: protein motif:HMM:NF015013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid II flippase MurJ"
                     /protein_id="HSV24222.1"
                     /translation="AVSALYYADRLNQLPIGVIGIAVGTVLLPEMANRIAVGDESGAR
                     RAQDRAITFTLLLSIPCAAAFAIVPDLIMSTLFLRGAFTVTDAAAAGATLAAYSIGLL
                     PFVLLRAVSSSFLARGDTATPVKALTISVVINVGLKILLMERYAQVGLAFATSIGVWV
                     NFGLLVWFAMRRKLISFDGWLRSCVIKLIVAGLVLAAVLFVAAGPVMRSCEALGALQF
                     AVALAILAILSVLVYGGAVTVLCGPTLLRSFFRGRGS"
     gene            988..2169
                     /locus_tag="VLJ17_14495"
     CDS             988..2169
                     /locus_tag="VLJ17_14495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSV24223.1"
                     /translation="MPTSATTRAFSLAALLVFMGCSESPQKQATVPPPPAVTVAKPAK
                     RVVVDHDEYVGRFVAIDSVEIRARVSGYLDRIDFTDGQMVKQGDLLFTIDKRPFQTAL
                     DQAKANLAQARANLAFAEADLARGAQLVRERTITEQTFDQRTQAKRVADAAVQAQEAA
                     MRQASLDLEFTELRAPVAGRIGDRRVSPGNLVTGGTAGNTSLLATIVSTDPIRFEFTF
                     DEASYLRYERLAQSGRDMTSRDTSVIVALKLIDEQDFLHQGRMDFVDNVIDRSSGTIR
                     GRAVFSNSDGVFTPGMFGRVRVPGSPSYSALLVPDTAISTEQARKYVSVVDTDNVVKL
                     KYVTLGQIFENLRVIKSGLEEDDRVIVNGLMRARPDQKVAPRDEAVPPKSPGSPQAKA
                     D"
     gene            2178..5348
                     /locus_tag="VLJ17_14500"
     CDS             2178..5348
                     /locus_tag="VLJ17_14500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020087037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0042908 - xenobiotic transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit"
                     /protein_id="HSV24224.1"
                     /translation="MRISHFFIDRPIFAAVVSIVFVILGAVSFSRLPVAQYPEIAPPI
                     INVTGQYPGASAEVVASTVASPIEDQINGVENMIYMSSNSTSDGRFSISVSFELGTNL
                     DIAQVQVQNRVAIATPRLPVEVRNIGVTVTKASPDLMMVVHLYSPDNSRDSLFISNYA
                     TLEIKDALTRVDGVGSITVFGVRDFAMRIWLDPNRLQSLGMTATDVTQALQGQNIQVA
                     SGVLNQQPVEHAGAFEIAVQTLGRLADPDQFSDIVVKQTPGALVRLKDVARIELAAQD
                     YTSNSYLDRDPAVALAIFQRPGSNALATAKGVVDTMNAVSVRFPPGIKHAIVYNPTEF
                     IQQSVNAVVETIGEAIILVVLVVIAFLQTWRAAVIPIVAIPVSLIGTFFFMGIFGFTL
                     NNLSLFGLVLAIGIVVDDAIVVVENVERNIANGLSPHDAAIKSMDEVGSALIAIALVL
                     CAVFVPAAFITGISGQFYRQFALTIMGATLISLVVSLTLSPAMCALLLKPHGARLRAR
                     WWEWPIRWFFRIFNWGFDGLARGYGVLAGRVVRFSALMLLVYIGILGYGLNEFHKTPV
                     GFIPQVDRGYLIMVTQLPPGASLARTDEVHKRAIDIALSTPGVAHGVNIVGFNGATFT
                     NAPNSGAIFLTLEPWEKRALDPRKSAAAITGALFGKLAAIQDALIFVVQPPPVAGIGN
                     AGGFRMMIEDRTGSGSQALLAAADAMKERANRTPGLLQVFSLFETSTPQLYLDIDRAK
                     AQLLGINVADVFTALQVFIGSAYVNDFNLFGRTFRVMAEADGPYRGDERDILSIRVRN
                     QNGDAVPLGSFTTVRSISGPYRVPRYNLYRTAELDGQAAPGYSQGQAIQIMEKLASET
                     LPEGFSYEWTTLAFQQLRAGNTAGFAFTLAVVFVFLVLAAQYESLTLPLAVILIVPMC
                     LVASITGVILRGMDNNILTQVGFVVLIGLAAKNAILIVEFAKQLEDRGRDRFAAAVEA
                     ARLRLRPILMTSLAFIFGVVPLVWSVGAGAELRQALGTAVFAGMIGVTAFGLVFTPVF
                     YVVTRWLADVASRRRPPRQSAPQPAE"
     gene            5355..5930
                     /locus_tag="VLJ17_14505"
     CDS             5355..5930
                     /locus_tag="VLJ17_14505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24225.1"
                     /translation="MTAIADTAPGPMVRWHYLGYSALALVVMASAIMSHERWFLNFVH
                     VICGVLWTGIDLFMGFVIGPILRRVDMLVRREIIVRLVPKTLFLMPTLSIITGTTGWY
                     LAKDLGFLDVPWPQFGWVATALVLVVLMTIQGTGYLLPTNLRVCMQLRKPDPDFDKIS
                     RMMRSFFFAVAMQGTMQVLTIIIMARFVSGL"
     gene            5961..8270
                     /locus_tag="VLJ17_14510"
     CDS             5961..8270
                     /locus_tag="VLJ17_14510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HSV24226.1"
                     /translation="MQPSKFGVSQGLTRKEDDALLRGNGRYVADILPDGTLHAVVLRS
                     PHAHARFRISGVTAARAMKGVHLVLTGPDVADLGDLPCVAIPEGLTVNAPPYPILARE
                     EVRHVGDAVALIVADTVEQAKDAAEAIVIDWQPLSHVVSALDALKPGAPQVWSSHAGN
                     VVFRQTLGEEKSTAHALATAARTVSLSVVNQRLVTNYLDTRAVIAEYDTTADRITLTL
                     GSQGSHLLRDLLSQAVLKIAPDKLRIITPDVGGGFGTKLFPYREYALAAVAAKRLRRP
                     VKWVAERTEHFLGDTQGRDNFTTATLALDADHRFTALSIDMTCDMGAYLSAFAPYIPY
                     VGAVMLPGVYDFPTCFIRITAAFTNTLPVDAYRGAGRPEAAYLIERLVDTAARDIDLA
                     PEVLRRRNFIKPKAMPYTTPTQRVYDSGDFAGHMRHAQEAIDWNGFGKRAALSKKARR
                     LRGIGLATYIEACGNNGPDAATVRLDRDGNVTVLAGSQSTGQGHKTAYAQLVAEHLDL
                     PPERVVVIQGDTDLVPTGAGTGGSSSITCGGASIDSAARKLAANLKSIAVHELEAAET
                     DLEIENGVVRVAGTDRTVSFAALAASAAAKPELLSVTDSVGAPQATYPNGTHIAEVEI
                     DPDTGHVEILSYVVVDDFGVTLNPLLLAGQVHGGAAQGIGQAIMENTVYDRSSGQLVT
                     ASLMDYALPRASDTPPFAFETRNVRCATNPLGVKGAGEAGAIGSAPAVMNAVVDALHR
                     AYRIRHVDMPATPERVWAAIREGKRVHTL"
     gene            8539..9267
                     /locus_tag="VLJ17_14515"
     CDS             8539..9267
                     /locus_tag="VLJ17_14515"
                     /inference="COORDINATES: protein motif:HMM:NF027577.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4908 domain-containing protein"
                     /protein_id="HSV24227.1"
                     /translation="MRLSLHRRGALLALLGAAGLVNIGDAAETGPPLRIGHYSSVNGL
                     AGFVLDRLGTPIKLRLDGSEEIWALAVVPAPLNAVSLKRDDGSYVLRIDDRGNITFFD
                     ATFFNGVKVARDQDAQSLAIATATRPKAEDAAANLGKELTRLSGGNVTISLDAPALAP
                     DADAWSAIADAVAIVGISLKEVADALAREAVAKKVKRILIRDSGQVAIKLVGQMLVVE
                     IAADKPINGRPSSGLLTSTIGKLL"
     gene            complement(9374..9826)
                     /locus_tag="VLJ17_14520"
     CDS             complement(9374..9826)
                     /locus_tag="VLJ17_14520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24228.1"
                     /translation="MKSTPRMNATHWVAALAALAVTGTAAAGAQSLQIRQRMASQEAD
                     LVKDVEYTNSSCGTKLAVKFNWAGAPSDDLLKYSSEGFCNAALEGIQRVCGDAAGKDA
                     IKQKVKTVTCGFGASRTIALKNGAIDYKINFSSSNDADFVFEYLQNNL"
     gene            10155..>10395
                     /locus_tag="VLJ17_14525"
     CDS             10155..>10395
                     /locus_tag="VLJ17_14525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24229.1"
                     /translation="MVLITSIILIVLGVLAASSSIVAKRPDAKSYIDAVVPYQGWLGV
                     VACLWGIWIVFNAILHLEWIGYVPIWWLTFALSGVL"
BASE COUNT         1854 a         3102 c         3147 g         2292 t
ORIGIN      
        1 gcagtttcgg cgctttatta cgctgatcgg ctgaaccagt tgcccatcgg cgtcattggc
       61 atcgcggttg gcacagtgct cttgcccgaa atggcgaatc gaatcgccgt tggcgacgag
      121 agcggcgccc gccgtgcgca ggaccgcgcc atcacgttca ccttgttatt gtcgattccc
      181 tgcgccgccg catttgcgat cgtgcccgac ctcatcatgt cgacactgtt cttgcgcggc
      241 gccttcacgg taaccgatgc ggctgccgca ggtgcaacac tggcggccta ttcgatcgga
      301 ttgctgccgt ttgtgctgtt gcgtgccgtg tcgtcgagct ttctcgcccg cggcgatacc
      361 gcgaccccgg tcaaggcact gacgatttcg gttgtcatca atgtcggcct gaaaatcctg
      421 ctgatggaac gctacgccca ggtcgggctc gccttcgcga cttcgatcgg ggtgtgggta
      481 aatttcgggc tcctggtatg gtttgcgatg cgccgcaaac tgatttcctt cgatggatgg
      541 ttgcgatctt gcgtcatcaa actcattgtg gcgggccttg tgctcgccgc ggtgttgttc
      601 gtcgcggccg gcccggtgat gcgctcatgc gaagcgttgg gcgcgctgca attcgcggtg
      661 gcgctcgcca tcctcgctat cctgagcgta ctcgtttacg gcggggcagt taccgtcctg
      721 tgcgggccca ctttgttgcg tagttttttt cgtggtcgcg gctcatgaat gagcgtcgtc
      781 gcgattcgac ttttggccaa taaggcagat tcggcggcac atatatgcgt ctcgatcgcc
      841 ccttagggga ttgcaggcat ataaaaggcc ggattttcaa ctctttgtca tcgcgacagg
      901 gcgccttgaa tacctcagga cccttgtaca tgttgacgca tggcttacgt acatgcgtct
      961 tcttgcggtc gcattcacgg agaacccatg ccgacttctg ctaccacgcg cgcattctcg
     1021 ctcgcagcgc tccttgtgtt catgggttgc agcgagagcc cgcaaaaaca ggccaccgtg
     1081 ccgcctcctc cagctgtcac ggtggccaaa ccggccaagc gtgtcgtcgt cgaccatgat
     1141 gaatatgtcg gccgttttgt ggcgatcgac agcgtcgaaa ttcgcgcccg ggtttccggt
     1201 tatctggatc gcatcgattt caccgatggc cagatggtca agcaaggcga tctgctcttt
     1261 accatcgaca aacgtccgtt ccagaccgcg ctcgatcaag ccaaagccaa tctcgcacag
     1321 gcgcgtgcca atctcgcctt tgcggaagcc gacctagcgc gcggcgcaca gcttgtccgg
     1381 gagcgcacca tcactgaaca aactttcgat cagcgtaccc aagccaagcg cgtcgccgat
     1441 gctgcggttc aggcacagga ggcggcgatg cggcaggcga gcctcgacct cgaattcacc
     1501 gagctcaggg ctccggtcgc cgggcggatc ggcgaccgtc gcgtatcgcc cggcaatctc
     1561 gtcaccggcg gtactgcggg caacacctcg ttgcttgcca ccatcgtgtc gacagacccg
     1621 atacgtttcg aatttacctt cgacgaggcg tcctatcttc gctacgagcg gttggcccag
     1681 agcggccgtg acatgaccag ccgcgacacc agcgtcattg tggcgctcaa gctgatagac
     1741 gagcaggact ttctgcatca ggggcgcatg gatttcgtcg ataacgtgat cgatcgctct
     1801 tccggcacca ttcgcggccg cgccgtgttt tccaattccg acggcgtgtt cacgccggga
     1861 atgtttggcc gggtgcgggt acctggctca ccatcctatt cggccttgct cgttcccgat
     1921 accgcgatca gcacagagca agcgcgcaaa tatgtatcgg tcgttgatac cgacaatgtc
     1981 gtcaagttaa aatatgtcac gctcggccag atatttgaga atctgcgcgt gatcaagagt
     2041 gggcttgagg aggatgaccg ggtcatcgtc aacggattga tgcgggcgag accagatcag
     2101 aaggttgctc cgcgagacga agcggtgccc ccgaagtctc caggctctcc gcaggccaag
     2161 gccgactgag gtcgctgatg cgaatttcgc acttcttcat cgatcggccg atcttcgcgg
     2221 cagtggtgtc gatcgtcttc gtgatcctcg gtgcggtgag cttcagccgc ctgccggttg
     2281 cccaatatcc cgagatcgca ccgccgatca ttaacgtcac cggccaatat ccgggcgcca
     2341 gcgccgaagt cgtggcttcc accgttgcat cccccattga ggaccagatc aacggggtcg
     2401 agaacatgat ctacatgtcc tcgaattcca cctctgacgg tcgcttttcg atatcggttt
     2461 cgttcgagct tggaaccaat ctcgatattg cgcaggtcca ggtccagaat cgcgtcgcca
     2521 ttgcgacgcc gcggttgccg gttgaagtgc gaaatatcgg cgtcaccgtg accaaggctt
     2581 cgccggacct gatgatggtg gtgcacctct actcgccgga taactcgcgc gattcgctgt
     2641 tcatttccaa ttacgcaacg ctcgagatca aggatgcgct tacccgcgtc gatggagtcg
     2701 gatccataac ggtgttcggc gtgcgcgatt tcgccatgcg aatttggctc gaccccaacc
     2761 ggctgcagtc tcttggcatg acggcgaccg acgtgacgca ggcgctgcag gggcagaaca
     2821 tacaggtcgc atcgggggtt ctcaatcagc agccggtcga gcatgccggg gcctttgaga
     2881 tcgcggttca gacgctcgga cgactcgccg atccggacca gttctctgac atcgtcgtga
     2941 agcagacgcc gggggcgctg gtacggctca aggacgtggc gcgcattgag ctggcggctc
     3001 aggactatac gtccaattcc tatctcgatc gcgaccccgc agtcgctctc gcgatctttc
     3061 agcgtccggg ctcgaacgcg cttgcgaccg ctaagggtgt tgtcgatacc atgaacgcgg
     3121 tctcggtgcg ttttccgccg ggcattaagc acgccatcgt gtacaacccg accgaattca
     3181 tccagcagtc ggtcaacgct gtcgtggaga ccatagggga agcaatcatc ctggtggtgc
     3241 tggtggtgat cgcgttccta caaacgtggc gggcggcggt cattccgatc gtggccatac
     3301 cggtttcgct catcggcact ttcttcttca tgggcatatt cggctttaca ctcaacaatc
     3361 tttcgctgtt cggcctcgtg ctcgcaatcg gcatcgtggt cgacgacgcg atcgtcgtcg
     3421 tggagaacgt cgagcgcaat attgccaacg ggttgtcgcc gcatgacgcc gcgatcaaga
     3481 gcatggacga ggtcggctcg gcgctgatcg caatcgcgct cgtgctgtgt gcggtgttcg
     3541 ttccggccgc cttcatcacc gggatatcgg ggcagttcta tcggcagttc gctctgacca
     3601 tcatgggcgc tacgctgatt tcattggtcg tgtcgctgac gctgtcaccg gccatgtgcg
     3661 cactgttgct caaaccgcat ggcgctcgcc tgcgcgcgcg ctggtgggaa tggccgattc
     3721 gctggttttt tcggatattc aattggggct tcgacggcct cgcccgaggt tatggcgtgc
     3781 ttgccggaag ggtggtgcgg ttttccgcat tgatgttgtt ggtgtatatc ggcattctcg
     3841 gctacggact gaacgagttc cacaagacac cggtcggctt cattccccag gtggaccggg
     3901 gttatctcat catggtgacg caactgcccc cgggcgcttc gcttgcccgt acggacgagg
     3961 ttcacaagcg cgcaatagac atcgcgctca gcaccccggg cgttgcacac ggcgtcaaca
     4021 tcgtcggttt caatggcgcg acattcacca atgcgccgaa ctcaggcgct atttttctca
     4081 ctctcgaacc atgggagaag cgcgccctag acccgcgcaa atcggcggcc gctatcacgg
     4141 gggcattgtt cggcaagctc gccgcgatcc aggatgcgct gatcttcgtg gtgcaaccgc
     4201 caccggtagc tggcataggt aatgctggcg gctttcgcat gatgatcgag gatcgtactg
     4261 ggagcggatc ccaggcgctg ctggctgcgg ccgatgccat gaaggagcgc gccaatcgga
     4321 cgccagggct gctgcaagtc ttttcactct ttgagacctc gacgccgcag ctttatctcg
     4381 acatcgatcg tgccaaggcg cagcttctcg gcatcaatgt cgccgacgtt ttcaccgcgc
     4441 tgcaggtttt catcggttcc gcctatgtca acgatttcaa cctgttcggg cgtacctttc
     4501 gggtaatggc ggaagcggat gggccctacc ggggcgacga acgcgatatc ctcagcattc
     4561 gggtgcgcaa ccagaatggc gacgccgtgc cgctcggctc gttcaccaca gtgcgcagca
     4621 tttcgggtcc ctatcgggtg ccgcgctaca acctgtatcg gactgccgag ctcgacggcc
     4681 aggcggcgcc cggctattcc cagggacagg cgatccagat catggaaaag cttgcgtcgg
     4741 agacgctgcc tgaggggttt agctatgaat ggacgacgtt ggcgtttcag cagctccgcg
     4801 ctggaaacac cgccggcttc gcgtttacgc tggcggtggt gttcgtgttc ctggtgctgg
     4861 cggcgcaata cgagagtctc acgctgccgc ttgccgtgat tctgattgtg cccatgtgcc
     4921 tggtcgcctc gatcacgggc gtgattctgc gcgggatgga caacaacatt ttgactcagg
     4981 tcggtttcgt ggtgctaatc ggccttgcgg ccaagaacgc aatcctgatt gtggagttcg
     5041 caaagcagct tgaggatcgc ggacgcgatc gcttcgcggc ggcggtcgag gcggcacggc
     5101 tccgcctgcg gccgatcctg atgacgtcgc tcgccttcat cttcggtgtg gtgccgctgg
     5161 tgtggtcggt gggagcaggc gcggaactgc gccaggcgct gggtaccgcg gtgttcgccg
     5221 gcatgattgg cgtgacggcg ttcgggcttg tgttcacacc ggttttctat gtggtcacgc
     5281 gctggctggc ggacgtcgcg agccggcgcc gtccgccgcg gcaatccgcg ccgcagccgg
     5341 cggagtgaag attcttgacc gcgattgccg ataccgcccc aggcccgatg gtgcgctggc
     5401 actatcttgg ttacagtgct ctcgcgctcg tcgtgatggc gtcggcgatc atgagtcatg
     5461 agcgctggtt tctcaacttc gttcacgtta tttgcggcgt actttggacc ggtattgacc
     5521 tgtttatggg ctttgtgatc gggccaatcc tgcgtcgcgt cgatatgttg gtgcggcgcg
     5581 agatcattgt ccggctggtg ccaaaaacct tgttcctgat gccgacgctc tcaatcatta
     5641 cgggcaccac cggctggtat cttgccaagg acctggggtt cctcgatgtt ccatggccgc
     5701 aattcggatg ggttgcgacc gctctcgttc tcgtcgtact gatgaccatc caaggcaccg
     5761 gttatctgct accgacaaat ttgcgggtgt gcatgcagtt gcgaaagcct gatcccgact
     5821 tcgacaagat cagtcgcatg atgcgcagct tcttttttgc tgtcgcgatg cagggcacca
     5881 tgcaggtatt gaccatcatc atcatggccc gtttcgtatc tggcctgtaa gccacgggta
     5941 ccagagcggt cggagaattc atgcaaccga gcaaattcgg cgtttcccaa ggcctgaccc
     6001 gcaaggaaga cgatgcgctc cttcgcggta atggccgcta tgtggcagac atcttgccgg
     6061 acggcacgtt gcacgccgtg gtgcttcgtt cgccgcacgc ccatgcacga tttcgcatca
     6121 gtggtgtcac ggcggctcgc gccatgaaag gtgtgcatct cgtgctcacc ggaccggatg
     6181 tggctgacct cggtgatctt ccctgcgttg ccattccgga gggcctcacc gtcaacgcac
     6241 cgccctatcc gatcttggcg cgcgaggagg tccgacatgt gggcgacgcc gtggccctca
     6301 tcgtggccga tacggtcgag caagccaagg atgcagccga ggcgattgtc atcgactggc
     6361 agccgttatc ccacgtggtg tccgccctcg acgcgctcaa gccgggagcc ccgcaggtgt
     6421 ggtcgagcca cgccgggaat gttgtgttcc ggcagacact gggcgaggag aaaagcacgg
     6481 cgcacgcgtt ggcgaccgca gccaggaccg tatctttgtc cgtcgtgaat cagcgactgg
     6541 tcaccaatta tctcgatacc cgtgcagtga tcgcagaata tgacacgaca gcagaccgca
     6601 tcacactcac gctcggtagt cagggctcgc atctgctgcg cgacctgttg agtcaagcag
     6661 tgctcaaaat cgcgccggac aagctgcgca tcatcacgcc agatgtcggt ggaggattcg
     6721 gcaccaagct gtttccctat cgcgaatatg cgctcgccgc cgttgcggcg aagcggctca
     6781 ggcgtccggt aaaatgggtc gccgagcgga ccgagcattt cctcggcgac actcaggggc
     6841 gtgacaattt caccaccgca acgctcgcgc tcgacgcgga tcatcgcttc acggcgttgt
     6901 cgatcgacat gacctgcgac atgggcgcgt atctctcggc ttttgcgccg tatataccgt
     6961 atgtgggcgc cgtgatgttg ccgggcgtct acgattttcc gacttgtttc atccgcatca
     7021 ccgcggcctt caccaataca ctaccggtcg acgcctaccg tggcgcgggc cggccggaag
     7081 cggcctatct gatcgagcgg ttggtcgaca ccgccgcgcg tgacatcgat cttgcacccg
     7141 aggtgctgcg tcggcggaat ttcatcaagc ccaaggcgat gccctacacg acgccgactc
     7201 aaagggtcta cgattctggc gattttgccg gacatatgcg gcacgcccag gaggccatcg
     7261 attggaacgg gttcggcaag cgcgccgctc tttcgaaaaa ggcccgaagg ctgcggggca
     7321 tcgggcttgc cacctatatc gaggcatgcg gcaacaatgg tccggacgcc gcgaccgtgc
     7381 ggctcgatcg cgacggcaat gtcacggtcc tggcgggatc gcagtcgacc gggcaggggc
     7441 acaagaccgc ctatgctcag ttggtcgccg aacatctcga cctgccgccc gaacgcgtgg
     7501 tcgtcattca gggtgatacc gatttggtgc caacgggtgc cggcaccggc gggtcgagtt
     7561 cgatcacctg cggcggtgct tccatcgaca gcgcagcgcg aaagctcgcc gcgaatttaa
     7621 agtcgatcgc cgtgcacgag ctggaagcgg ccgagaccga cctggagatc gagaatggtg
     7681 tagtgcgcgt cgccggcacc gaccgtacag tctcgtttgc cgcgttggcg gcgtcggcgg
     7741 cggctaagcc tgagctgctc tcggtcacgg attcggtcgg agcgccgcag gcgacctatc
     7801 caaacggcac ccacattgcc gaggtggaaa tcgatcccga caccggtcat gttgaaattc
     7861 tctcctacgt ggtcgtcgac gatttcggcg tgacgctcaa tccgttgctg ttggccggac
     7921 aggtccatgg cggtgccgcg caagggatag gtcaggcgat catggagaac accgtctatg
     7981 accgttcctc cggtcaactc gtcaccgcct cgctgatgga ctatgcgctg ccgcgagcga
     8041 gcgacacccc gccgttcgcc ttcgagactc gcaatgtgcg atgcgccacc aatccgttgg
     8101 gcgtgaaggg ggccggagaa gcaggtgcca ttggttcggc gccggccgtc atgaacgccg
     8161 tggtcgatgc tttgcatcgg gcttatcgga tacgccatgt ggatatgccg gcgacgccgg
     8221 aacgcgtatg ggctgcaatc cgggagggca agcgcgtcca taccttgtaa aatagcttct
     8281 ggactggcgc agctgacgaa acgatcgcca gcgaagcact gtcactatgc tgctgccacc
     8341 gacacgttcg tcgaaatcag attttcagaa tcgggaatgc ggcttgtcgt catttagcca
     8401 tcgaggcttc acaatccccc tgcatgagag gcgacacgcc gaggtgccgc gatcgcagcc
     8461 aagccggcaa tttgcatcct gcctcaccct cgatcggcgc tgctcacggt ttcgggcagc
     8521 gttctcgcag aggtcctgat gagattatcg ctccatcgac ggggagccct gctggcgttg
     8581 cttggtgccg ccggtctcgt gaacatcggc gatgcggccg agacggggcc gccattgcgc
     8641 attgggcatt acagcagtgt caacggccta gcgggctttg tgctcgatcg cctcggcacg
     8701 ccgatcaagc tgcgcttgga tgggtcggag gagatttggg cactcgccgt cgtgcccgcc
     8761 ccccttaacg ccgtctcgct taagcgtgac gacggctcgt atgttctgcg catcgacgat
     8821 cgcggcaaca taacgttctt cgacgcaacg ttctttaacg gcgtgaaggt cgctagggat
     8881 caggacgccc agtcgttggc cattgcgacg gctaccaggc caaaggctga ggatgctgcg
     8941 gcgaacctcg gcaaggaatt gacccgtctg agcggcggaa atgttacaat ctctctggac
     9001 gcgccggccc ttgcgccgga tgccgacgca tggtcggcga tagccgatgc ggtcgcgatc
     9061 gtgggcatct cgctcaagga agtggccgac gcgctagcgc gtgaggcagt cgccaagaaa
     9121 gtcaagcgca tccttattcg tgatagcggc caagtggcca tcaagctggt tggacagatg
     9181 ctcgtggtgg aaatcgccgc cgacaagccg atcaacggcc ggccttcgtc aggacttctc
     9241 acatcgacga tcggaaaatt gctatagctg gatcatccct gaaaggctgc cgccttggtg
     9301 ggcattgctt caccggtccc gccgtcgggt tttgcagtag gcggcggggg atgcagattc
     9361 gcacgcgcgc cgatcaaaga ttgttctgca gatattcgaa gacgaaatct gcgtcgttgc
     9421 tggagctgaa attgattttg taatcgattg cgccattttt cagtgctatc gttcgcgagg
     9481 cgccaaagcc gcaagtcaca gtcttgacct tctgcttgat cgcgtctttg ccggccgcgt
     9541 caccgcagac gcgctgaatt ccctcaagtg cggcattgca gaagccttcg gagctatatt
     9601 tcaatagatc gtccgacggc gcgccggccc agttgaattt caccgccagt ttcgtcccgc
     9661 aggacgagtt ggtgtactcg acgtctttca ccagatcagc ctcctgcgag gccatccgtt
     9721 ggcgaatttg cagtgattgg gcaccagcgg ccgctgtgcc ggtcacggca agtgccgcca
     9781 aggcggcgac ccaatgtgtg gcgttcatcc tgggtgtgga cttcattgta gctccccggt
     9841 tgtctgtgaa acgttgcgat tgcaatccgc aagctcatgc aacctgattg tggaaaagcg
     9901 atggcacgcc cactatcatg agattgcgat aggatattct gccctgcggt caaaataatt
     9961 cctcccgcgc ctcacattgt tcgtcgacgt ctcacaaacc tgccacaaac atgcattgtg
    10021 gtgccgctcg gtaacctgcg attgtcgtca atgtagcggc gccgttgcgc tggctgggca
    10081 ttgaaccttg ccgttgccgc gtcaacacag caccctgtct ctaacggaga atcactctct
    10141 aacggagagc caccatggtg ttgatcacca gcatcattct cattgtttta ggagtgcttg
    10201 ccgcttcctc aagcatcgtc gccaaacgcc cggacgccaa gagctatatc gatgccgtgg
    10261 tgccttacca gggctggcta ggtgttgtcg cttgcctatg gggtatatgg atcgtcttta
    10321 acgcaattct tcatctcgaa tggattggtt acgtcccgat ttggtggctc acttttgcgt
    10381 tgtccggagt gctcg
//
LOCUS       DATILV010000619         5383 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_402746, whole genome shotgun sequence.
ACCESSION   DATILV010000619 DATILV010000000
VERSION     DATILV010000619.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5383
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_402746"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..197)
                     /locus_tag="VLJ17_14530"
     CDS             complement(<1..197)
                     /locus_tag="VLJ17_14530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24230.1"
                     /translation="MLALFLGPTAGRNFTPVGGYHRAALSALVLWSLVTTFAVAHEGH
                     DNEQAVIATAPSLTRLVTSSET"
     gene            438..728
                     /locus_tag="VLJ17_14535"
     CDS             438..728
                     /locus_tag="VLJ17_14535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24231.1"
                     /translation="MIVQRAGAAIDSMLMDGSVRVHVCDDVLLGMPMGGISMTVVVVA
                     VGASCGLRDKAALQGKSHRCRHHQDVDEPQEPGACAKAQHVTSRYRFNLATR"
     gene            complement(725..1000)
                     /locus_tag="VLJ17_14540"
     CDS             complement(725..1000)
                     /locus_tag="VLJ17_14540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011970463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sensing transcriptional repressor"
                     /protein_id="HSV24232.1"
                     /translation="MHSHVHESHPEIVKRLKRAEGHIRRVIGMFGEGRNCLELAQQLH
                     AVEKAINQAKRQLIHDHVDHCLDMAVNGRGAPARAIVNEFKAISRYL"
     gene            complement(1471..2526)
                     /locus_tag="VLJ17_14545"
     CDS             complement(1471..2526)
                     /locus_tag="VLJ17_14545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HSV24233.1"
                     /translation="MYGRSILYALLSAGLFGVSTPTAKVLLGSTEPTVLAGMLYCGAG
                     LGVALIRRFARPVLFPSGAVEVALGSADLPWLCGAIVAGGIVGPVLLMIGLTLTDAAT
                     ASLLLTLEGIATALMAWFLFRENFDRRVVLGMVCLVAGVVILSWSGQPTLSGVIGPLA
                     IIGACVAWGLDNNLTRKLSLSDPLQIVELKGLVAGPVNVALGLWMGGRLPDILAIGTA
                     TIVGFVGYGVSLALFVVALRHLGAARTGAYFSTAPFFGATTAVIALGDPVTPPLIIAG
                     ILMGLGVWLHVSERHQHVHHHAPATHSHAHTHDEHHQHAHGPEDPPGEPHVHAHQHTA
                     LVHSHPHAPDMHHRHRH"
     gene            2707..2982
                     /locus_tag="VLJ17_14550"
     CDS             2707..2982
                     /locus_tag="VLJ17_14550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018010517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24234.1"
                     /translation="MPLRRLRSSAASAKSHSRHALIFGSIAVACGQTIQYVFDNRNAR
                     KNGLTSRAELGQLVSGAKPGRQTAGEITIFDSTGTGIQDVAAGARGL"
     gene            complement(3061..3804)
                     /locus_tag="VLJ17_14555"
     CDS             complement(3061..3804)
                     /locus_tag="VLJ17_14555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007597810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HSV24235.1"
                     /translation="MVDLLSLDVVIFLTGTLAAAFVTGLAGFAFGMVAASIWLYALTP
                     LQASLLIVAYGILVQGYAVWKLRHSVNMYRLAPFIVGSAAGIPAGVAALRWTASVQLR
                     AGVGALLIAFSLYNLVRPRLPEMKGVGRSADLAVGFLNGVLGGATGLAGILPTIWTSL
                     RGWSGDEQRAVFQPTAVATFLMTILALGGVGAITPDTVHLFLIGIPALVFGSALGWCL
                     YGKLDEATFRRIVLGLLLVSGTALLASGR"
     gene            complement(4067..>5383)
                     /locus_tag="VLJ17_14560"
     CDS             complement(4067..>5383)
                     /locus_tag="VLJ17_14560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24236.1"
                     /translation="PPGVAVRQKLMRSALCVGVAAGALLAVSQIKLSIDVTEDRRNSF
                     AVADVNQLARLAEPLTITVHLAAEDPRYIDLQRNVLAKLERVMPHVSIRLATERQSFA
                     SAVGEESYGEIEYRYGARSDTSRSTSPREILPLIYGLAGAQPPAPISSAEFPGYPLIM
                     DGAFALIWFLAVLPILIVLAWWRNRRIPANNRTSPKEVIMNSGTRVMLIAVATVGVLL
                     IPAIAAPVLKVDLSTETTGAEPKSLVPVVGIWRVETDAGKIVLAVDGRQWKEGQSSAG
                     IADKARALYGERYAEFLDRVQAYAYYPYVVAKDIDDFKNGEISVRFQGLSGRIDQGAG
                     ILFNLKPNGDYLTIRANCLENNLVLWKFEKGRRSSVEWVKNTPTSSKQWHDLKVRIAG
                     NKVEGYLDGKLYLQHTLPAPVSGKIGLWSKADSYMHFDDFIAAANE"
BASE COUNT         1175 a         1567 c         1620 g         1021 t
ORIGIN      
        1 gtctcggaac ttgtgaccaa tcgcgtcaag ctgggcgcgg tcgctatgac cgcttgctcg
       61 ttgtcgtgcc cctcgtgggc gaccgcgaac gtggtcacca agctccacag cacgagggcg
      121 gaaagagcgg cgcgatgata accgccaacc ggcgtaaaat tccggcccgc agttggaccc
      181 aagaatagag ctagcattgc agaaccccgt ggacatacca cttccatggc gtggcgcgtg
      241 gccacgcgcg gtcaggctat gctggggggt cttggcggat gtcttggtcc gtccggctca
      301 gtaccgcgaa acgggtctgg cttttcgatc gcgagccggc tgctcgcaac cgatctgact
      361 tggtaaaccg gcaggatggg taatactgcg actacgatgg ccatgttcca gcaacatgga
      421 caaccgggct cccgaagatg atcgttcaac gtgcgggtgc cgccatcgac agcatgctga
      481 tggacggttc cgtccgcgtg cacgtgtgtg acgacgtgct ccttggcatg ccgatgggag
      541 gaatcagtat gactgtggtg gtagtggctg ttggtgccag ctgcggcttg cgcgataaag
      601 ctgctctgca aggtaaaagc caccgctgcc gccatcatca agatgtcgac gaaccgcaag
      661 aaccaggggc gtgcgccaag gcgcaacacg ttacctccag ataccgtttc aacctcgcca
      721 cccgttagag gtagcgcgaa atcgccttga actcgtttac gatggcccga gcgggtgcac
      781 cccgaccgtt gaccgccata tcgaggcagt gatcgacgtg gtcatgaatg agttgccgct
      841 tcgcctggtt gatagccttc tcaaccgcat gcaactgctg tgcaagctca aggcagttac
      901 ggccctcgcc gaacatccct atcacccggc gaatatggcc ttcagcgcgc ttgaggcgct
      961 tcacgatctc cggatgactt tcgtggacat gcgaatgcat agctaattcc tatcctagtg
     1021 gaggggatat gccaagagcc cccgccaaga tcttccacta tcgtatcctg gggaacacta
     1081 tctgcggctt gtgacgttaa tcaacgcggc gctcgcttcc tttttaatcc cgttccacta
     1141 ccctatagag caagccccga ttgttaaatg gcgagcttta aacgttaaga gttcattttg
     1201 gaaatttggc tgacttgacg gttggtgggt ttcgtcggat gacgcgccca taatgggggt
     1261 ccgtgacacg tcggaaaagt agctctgttg acgactacac ctgtccgcat tgcggagcga
     1321 tctgtgctgt cgcatttcgg caatttcccg ctcgcaacag tgataggcca caagattatg
     1381 gctttttgga acgatacttt cttcttcaat ccgcgccgcg gacttcattc gtcgtcgacc
     1441 cggtgttgat ccgcccccaa cgagccaaat ttagtgccgg tgccgatgat gcatgtctgg
     1501 cgcatgcgga tgcgagtgca ccagggctgt gtgctgatgt gcatgcacgt ggggttcgcc
     1561 cggcggatcc tcggggccgt gtgcatgctg atgatgttca tcatgtgtgt gagcgtgcga
     1621 atgagttgct ggcgcatggt ggtggacgtg ctggtggcgc tccgaaacgt gcagccatac
     1681 accgaggccc attaatatac cggcgatgat cagcggcggg gtaactgggt cgccgagtgc
     1741 gataacggct gtggttgcgc caaaaaaggg ggcggttgaa aaatacgcgc cggttcgcgc
     1801 cgctccaagg tggcgcaggg ccacgacgaa cagcgctagg ctcacgccgt agcccacaaa
     1861 tccgacaatg gtcgcggtac cgatcgcaag gatatcggga agcctgcctc ccatccacaa
     1921 tcccagggca acgtttacag gcccggcaac gaggcccttc agctccacga tctgcaacgg
     1981 atcggagagg gagagcttac gcgtaagatt gttgtctagc ccccaggcaa cacatgcacc
     2041 gatgatcgca agcggtccga tgacgcccga tagcgtgggt tgccccgacc aggagaggat
     2101 gacgacaccc gcgacgagac acaccatgcc aagaacgacc cgccggtcga agttttcgcg
     2161 gaagagaaac catgccatga gcgccgttgc tatgccctcc agtgtgagca acagggacgc
     2221 ggtggctgcg tcggtaagag tgagaccaat catgagaagc accgggccga cgatgccacc
     2281 ggcaacgatt gctccgcaaa gccacggcag atcggcgcta cccaacgcca cttctacggc
     2341 accggaagga aagagtacgg ggcgggcgaa tcgtcgaatc aacgcgactc caagcccggc
     2401 accgcaatag agcatccccg cgagaacagt gggttccgtt gagcccagaa gcacttttgc
     2461 agtcggcgtc gaaacgccga acaggccagc agacaggagg gcatagagga tggagcggcc
     2521 gtacatgcgg acagtctaac actgccttcg ggcaaccgag ccgtttatta gacataagca
     2581 agccatcgca atgctgaaca agtgatggct tgtgcggcat atagctaacg acggcatcgg
     2641 cgcaggagcc attatcgttt gatagcgctg cgatccggtt tggaagagag tcgcgccgcc
     2701 gaaacgatgc ccttgagacg gctgaggtcg tcagcggctt ctgccaaaag ccattcacga
     2761 cacgccctta tcttcggcag cattgccgtc gcttgcgggc agacgatcca atatgtcttc
     2821 gacaaccgca acgccaggaa aaatggcctc accagccgag ccgaactggg acaactcgtg
     2881 tccggtgcca agccgggacg ccagaccgct ggcgagatca caatattcga cagcacaggc
     2941 accggaattc aagatgtcgc ggctggcgca cggggcctat gaggtagcat gcgactgcgg
     3001 tcttggcctg cgttgcaatc cggcataaag gcgctctaat ccgaggtgtt cggtgcagcg
     3061 tcaccttccc gatgctagga gcgccgtgcc ggatacaagc agcaacccaa gtacaatcct
     3121 tcgaaacgtg gcttcgtcga gcttcccgta aaggcaccag ccgagcgctg acccaaatac
     3181 caatgcggga ataccgatca ggaagagatg cacggtgtcg ggcgtgatgg caccaactcc
     3241 accgagtgcg aggatcgtca tcaaaaacgt cgcgacagcg gtcggctgaa agacggcgcg
     3301 ctgttcgtca cctgaccagc cacgcaggct tgtccagatt gtcggaagaa tgccggcgag
     3361 gccagtcgcg ccaccaagca ccccgttgag aaatccgacc gccagatccg cggagcgacc
     3421 tacgcccttc atttcgggca acctgggccg cacaagattg taaaggctga aggcgatcag
     3481 caaggcgccg acgccagcac gcagttgcac ggaagccgtc cagcgcagtg cagcaacacc
     3541 tgcgggaata cccgcagcgc tgccaacaat gaacggtgcg agccgataca tgttgacgga
     3601 atggcgcagc ttccagacgg cgtagccttg aaccaggatg ccgtaagcga caataagcaa
     3661 tgaagcctgc agaggcgtca gagcgtaaag ccaaatgctt gcagcaacca tcccaaaggc
     3721 aaagcctgcg agtcccgtca cgaaggctgc cgccaatgtg ccggtgagga atatcaccac
     3781 atcgagtgat aacagatcga ccatctcgtc ctgttctgat gcaagtttcc tggagtgaaa
     3841 ggagacagga acgaacagtc tccccagccg ggcagcggaa gctttgtttc gaggaaattg
     3901 ccctcgcgtg gctccccgat aatacttgca aaccgttctt tggcgttgac gagcgccacg
     3961 acccgggtga gtgccggaca gtacgctgag gtgccctcag cgcgcgcggc aggtatctgc
     4021 cagccgaacg gacaaggacg cgcgcgacac tcggacttct cgatgatcac tcatttgcgg
     4081 cggcgatgaa gtcgtcgaaa tgcatgtagc tgtccgcctt cgaccacaag ccaatctttc
     4141 ccgaaaccgg cgccggcagc gtgtgctgca gatagagctt gccgtcgaga tagccctcca
     4201 ccttgttgcc ggcaatacgg accttgaggt cgtgccattg cttgctggac gtcggcgtgt
     4261 ttttcaccca ttcgacggac gaccgccggc ccttttcgaa cttccacagg acaagattgt
     4321 tttcgaggca attcgcccgg atcgtcaaat agtcgccgtt gggtttgaga ttaaacagaa
     4381 tgccggcgcc ctggtcgatg cggcccgaca ggccctggaa tcgcacgctg atttccccat
     4441 tcttgaagtc gtcgatatcc ttggcgacca catagggata atacgcgtag gcctgcacgc
     4501 ggtcgagaaa ttccgcgtag cgttccccat agagtgcgcg cgccttgtcg gcgatgccgg
     4561 cggaggattg gccttccttc cattgccggc cgtcgaccgc cagcacgatc ttgcccgcat
     4621 cggtctcaac gcgccagata ccgactaccg gaaccagtga ctttggttcg gcgccggttg
     4681 tttcggtgga aagatccacc ttgagaaccg gcgccgcgat tgcgggtatc agcaggacgc
     4741 cgacagttgc gactgcaatc agcattactc ttgtgccact attcatgatg acctcctttg
     4801 gggacgttcg gttgttggcg ggtatgcgac ggttacgcca ccatgcgaga acgatcagga
     4861 tgggtagtac ggcgaggaac cagataaggg cgaacgcgcc gtccatgatc agcgggtagc
     4921 ctggaaattc ggcggaagag atcggtgcag ggggctgcgc gcccgcgagg ccatagatca
     4981 gcggaagaat ttcgcggggg cttgtcgatc ggctggtgtc cgatcgagcg ccatagcgat
     5041 attcgatctc gccatatgat tcttcaccca ccgccgacgc gaagctctgt cgctctgtgg
     5101 caaggcgaat ggaaacgtgc ggcatcaccc gttcgagctt cgccagcacg ttccgctgca
     5161 gatcgatgta gcgaggatcc tcggccgcaa ggtgaaccgt gatggtcagc ggctcggcaa
     5221 gccttgcgag ctggttgacg tcggcgaccg cgaaggaatt gcggcgatcc tcggtgacat
     5281 cgatcgacaa cttgatctgg gacacggcaa ggagcgcgcc cgcggcgacg ccgacgcaca
     5341 gcgcggagcg catcagcttc tgcctaacag caacgccggg cgg
//
LOCUS       DATILV010000620         2945 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1940990, whole genome shotgun sequence.
ACCESSION   DATILV010000620 DATILV010000000
VERSION     DATILV010000620.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2945)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2945)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2945
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1940990"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(64..885)
                     /locus_tag="VLJ17_14565"
     CDS             complement(64..885)
                     /locus_tag="VLJ17_14565"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HSV24237.1"
                     /translation="MKRLLGAVTLGLAVACGNVNANARVPLPVIEQASGTASLAPLLK
                     AITPAVVSIAIRVAAVGKNSSSNKAQKAQRSASARNIQADGRLRASGSGVLIDSAEGI
                     ILTNAHVIDGADEIVVTLADGRALPAARIGADKATNLAVIKVTAPALPAMPIGNSDQL
                     EVGDFVLAIGNPYVIGQTVTSGIVSALHRNKLGIEQYEDFIQTDAAIYPGNSGGALVN
                     LRGELVGINTAFRAAGNASPGMGLAIPINMVRSAADQILKPDDRRREREATAGTF"
     gene            complement(995..1195)
                     /locus_tag="VLJ17_14570"
     CDS             complement(995..1195)
                     /locus_tag="VLJ17_14570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24238.1"
                     /translation="MFTKTAFGLAVILATASGALAATKTHSAVPSEAAIYNVYNPQGA
                     YVGGDPDLSVRFELRRDWGRGN"
     gene            2004..2306
                     /locus_tag="VLJ17_14575"
     CDS             2004..2306
                     /locus_tag="VLJ17_14575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24239.1"
                     /translation="MSDIDVQRFSEIATVLAVICIPTFIVCRYLYTAYRTTRNMVTYG
                     LPRSDMRPRGFNPIAAGAFLLASDAKRLFRWLLQLPSGNARKRGRQMIARGPQRGH"
     gene            complement(2619..>2945)
                     /locus_tag="VLJ17_14580"
     CDS             complement(2619..>2945)
                     /locus_tag="VLJ17_14580"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSV24240.1"
                     /translation="LRLADMATRIEAVRALLERAAHAVDERATSADTLCNMAKLFASE
                     EIMKVARHAVELHGGNGMMLDFGVEKLFRDAAIFPHMDATADISRFKIVKSMFPATAG
                     AYAGPE"
BASE COUNT          579 a          874 c          890 g          602 t
ORIGIN      
        1 ttcgtcccaa ctgaccactg ggacagggtg tactaaccca gaatagccgc atggtcggtg
       61 ggatcaaaac gtgcccgcgg tcgcttcgcg ttcgcgacgc ctgtcatcag gtttgaggat
      121 ttgatccgcg gccgaccgca ccatgttgat cggaatcgcc aatcccatgc ctggactggc
      181 attgcccgcc gcgcggaagg cggtattgat gccgacgagt tcgccgcgaa gattgacgag
      241 cgcacctccc gaatttcccg ggtaaatggc ggcatcggtt tggatgaaat cttcgtattg
      301 ctcaattccc aacttgttcc ggtgcagcgc gctaacgatc ccggacgtca cggtttgacc
      361 aatcacatat gggttgccga tggcgagcac gaagtcgccg acctcgagct gatctgagtt
      421 tccgatcggc atagccggca gtgccggcgc cgtgaccttg atcacggcca agttggtggc
      481 tttgtcggcc cctattcgtg cggccggcag cgcgcgacca tcggcgagcg tcaccacgat
      541 ctcatcggca ccgtcaatga catgggcgtt ggtgaggatt atgccctcgg cgctgtcgat
      601 cagcacgcca gagccgctcg ctcgcaatcg accatctgct tgaatattgc gggcactggc
      661 ggatcgctgg gccttttggg ccttgttcga tgacgaattc ttgccaacgg ctgctaccct
      721 gatggctatg ctgaccaccg caggcgttat cgctttgaga agcggggcaa gcgaggcggt
      781 accgcttgct tgttcgatca ctggcaaggg tactctggca ttcgcgttga cgttcccgca
      841 cgcaacggca aggcctaatg tcaccgctcc aagtagccgt ttcatgacat tacttctttt
      901 cgttgcaaac gaccccaagg ctttgccact gtaagtgctg gggagggggc cggcccgaag
      961 gccgacctca acgctctcgc gtgatttttc tggttcagtt gccccgtccc cagtcccggc
     1021 gcagttcgaa acggacgctc agatccgggt cgccgccgac gtaggcgccc tgggggttgt
     1081 acacgttgta aatcgccgcc tcactcggga cggcggaatg agtcttggtc gcggcaagcg
     1141 cacccgaagc ggtggctagg ataacggcaa gtccaaacgc ggtcttggtg aacatggcat
     1201 tgtctccttt gctctaaata gccggtacga acgtcattga ccgtaccgtt cggtcaatta
     1261 gtaagggcac ccgcatgcgt caatgaccga acggttcggt cacattcatt tgatcgcatg
     1321 ggaagccagg gcggcaagtt cggatagttc ggatagtcac gtcgaaccag cgagagaatt
     1381 gtggcggggc gcaataaccc aaagccgcta cctgaacgaa atcctgaagc caaacggcaa
     1441 aatgctgcag tttgccagcg ctccgaagcc tcgccatccg agagcgcctg gcgtaacgcg
     1501 accccgccga cgactggcag cgcggcctgt cgatagcgca tagccggttc gcgcatgcct
     1561 tcagaaaggc aggcgagcga gaacacgagc gcgctcgata cattgcgcta ggggcggttg
     1621 atcatcgagc acgtggctgt cttcagacaa tgccgcgtgg aaacgcgacc tcacctggtt
     1681 cgagggccag atcgcggagt taatacggta attggttgcc gatgcggcaa atgccgcgat
     1741 ggagggtacg cgtaggcaca aacacgcgtt ggccggcaat gcaggccgca accgccgctg
     1801 atggatcgtc cattctgact cggccggcga cagcgatctc gatgatctgt ttgccgcggt
     1861 gaaactccca agggaagggg cggcctgtct gccgatcgcg gaaccgcacg cgaatcaact
     1921 ggggacggcc tcatggccgt ctcttgtatt ttcaaaagac tcatttgatt tagcgagagg
     1981 caatctgatc gggtaaaggc aacatgtcgg acatcgatgt acagcgcttc tcggagatcg
     2041 caacggtatt ggccgtcatc tgcattccga ccttcatcgt ctgccgctat ctgtacacag
     2101 cttaccgcac cactcggaac atggtgacgt acggtttgcc gcgatcagat atgcgcccgc
     2161 gcggcttcaa tccgatagcg gcgggcgcgt ttctactggc gtccgacgcc aagcgcctct
     2221 tccgttggct gctgcaattg ccgtccggta atgcgcgcaa gcgtggccgc cagatgatcg
     2281 cccgcggccc gcagcgcggg cattagcgcc tcgttcttcc cgacgacttt cacgccccga
     2341 ttgagaattg ccgggtcgta gctggcgagc atttcgccca cccggcgggg caatgctcgt
     2401 ttggacggct atgcgcggca aaagcgctgc cgatcgcaag agtctgagcg cgtgcccgtc
     2461 gccttcgcca ctgtgcagcg tggctgctct gggacaaacc aggacttcat gaaccaaata
     2521 gggttagaaa agtatgcagt tgctgtatgg gtgggtataa ggacgaccaa tatccagtgc
     2581 ccagtttgtc cgcggttggt ccgccaaagg aaacgtgctc actcggggcc cgcataggcc
     2641 ccggccgtag ccggaaacat cgatttcacg atcttgaatc gcgagatgtc ggcagttgca
     2701 tccatgtgtg ggaagatcgc ggcgtcgcgg aacagcttct cgacgccgaa atccagcatc
     2761 atgccgttgc cgccatgcaa ctcgacggcg tgccgggcga ccttcatgat ctcctccgag
     2821 gcaaacagct tggccatatt gcagagcgtg tcggcgcttg tcgcgcgttc gtccacagcg
     2881 tgagcggcgc gttccaggag cgcccggacc gcctcgatac gggtcgccat atcggcaagc
     2941 cgcag
//
LOCUS       DATILV010000621        10681 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2451396, whole genome shotgun sequence.
ACCESSION   DATILV010000621 DATILV010000000
VERSION     DATILV010000621.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10681)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10681)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10681
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2451396"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(459..1952)
                     /locus_tag="VLJ17_14585"
     CDS             complement(459..1952)
                     /locus_tag="VLJ17_14585"
                     /inference="COORDINATES: protein motif:HMM:NF022073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005615 - extracellular space [Evidence
                     IEA];
                     GO_function: GO:0047989 - hydroxybutyrate-dimer hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0019605 - butyrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyrate oligomer hydrolase family
                     protein"
                     /protein_id="HSV24241.1"
                     /translation="MHRSHALRSIVFAVLTVFAASNMPASAAARCDRLLELLKTKIAD
                     VTCFESSDLTTANPATTPANDSLPGLPPFAFTPQTDRNVIAPPPGFRTPITRAVQGVQ
                     MQARIADDPLGQARILIRLPDDWNGKLVVAGASGTRSEFNGDFAWSDYVIQKGYAYIS
                     QNKGIYNLFVSTAADPLGCRLNPTSGTFVHFYDNDPGAVFTRWNEIMLAATKIGRDAL
                     ESHYGRHPVRTYAVGTSNGGYQVRRAMETAPELFDGGVDWEGTFVDPVAPNLLSALPP
                     AILNYPDYLASRFSFDSTAAKNIREAGYPPDMVVPDSTTSLWGLHWNQFWEVTLCQWQ
                     KRLDPTYDTYVSGPGTYVYVDRLSVSEVGANITAFATTGRLKRPLITVAGTMDGLLPI
                     DLHARAYARRVEAALRHDDSAVRPPEQRAPEYRLYEVQNGNHIETFVTTFPRLELIEP
                     HAHRAFDLLITHVEAAAALPPSQCIPISGEIATTPPQPGHCARLLAP"
     gene            2824..3792
                     /locus_tag="VLJ17_14590"
     CDS             2824..3792
                     /locus_tag="VLJ17_14590"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV24242.1"
                     /translation="MRLELFTACSIIAALAICLPTLAQAPYPSRPIRLIVPFPPGGPV
                     DVMARFVVQRLGAALGQVIVDNRPGAGGTIGSKAASLAEPDGYTLLFGSSTTLAAGPS
                     LYRNLGYDPVKSFVPVGMISSVPFVLAVAPHVPATTLANLVAHAKANPGKLNFGAPTG
                     TLPHLTAEMFKLRAGINMVHIPYKGAASAITDVLSGEMDMAFEPISVMVAHVRDGKVR
                     PLAITGAERSLELPDVPTMIESGYPGFVSMSWTGIVAPAGTPPEVVAKLNRTIIETFR
                     SKDAQDGLARMGAEPKFGTPESFGAMIAAEIPKWAETVRAAGLRLD"
     gene            3794..4069
                     /locus_tag="VLJ17_14595"
     CDS             3794..4069
                     /locus_tag="VLJ17_14595"
                     /inference="COORDINATES: protein motif:HMM:NF028290.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HSV24243.1"
                     /translation="MQAALLDGAALSWPWAIPFVGLLLAIALAPSLRPCLLARHCGKI
                     AASWSATAVAAIALSAGITTARDTALHAMLTDYLSLPPMYSSDEDFI"
     gene            4119..6413
                     /locus_tag="VLJ17_14600"
     CDS             4119..6413
                     /locus_tag="VLJ17_14600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018266685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24244.1"
                     /translation="MLVYTAAFAVLAWPWLSGAVTIPWDAKAQFQAELQFLAASLARG
                     ESPFWTPNLFAGWPQIADPQSLIFSPLHVALAALDPTPSFREADFVTFAYLFAGGLGL
                     IMFFRDRDWQPGAAVIAALIFAFGGSAASRLQHTSEITSLSYVPVALWLLARTLDRAS
                     WRTGLAAGVVIALLIVGRDQVALLGLYVLALYVIAWWLDGEGRLMRIKRAVLPLAACA
                     ATAVVIAVVPVVLSALLAADSNRPMVGLERAGRGSLHPVLLLMLVFADLFGAADPNVD
                     FWGPPSAAWDARMGNGINLAQNMGEIYCGILAVVLILGTGIVRGLAWAREIRFFTWAL
                     VFVLLYALGSYTPAFRLMYDVLPGVELFRRPADATFIIGLLIAIEAGYLVHRVVSGTA
                     PQPRWFCAVDVAIVSALAATAIAVAHKVGNLDVAMWPIATGMAFAVTAIALLGLTRQL
                     APARPVLASALLFGLTIFDLVWNNAPNESTGLPPQRYDALRPQTRNETVALIKTKLAE
                     TFGPDRRDRVELIGIAYHWPDLALAQGFDHLFGHNPLRLHDFALATGVGDTVAEPRQR
                     TFAPLFPSYRSTMANLCGVRFIVTGVPVERIDTSLRAGDLTPVARTAEAYVYENPRAL
                     PRVMVVPDYQIADFGDMIRNGWPDIDPRRTVLLEQPPTVMPRAGDSKAVDGSARIRRY
                     ANTEIDLEVDAPDGGFLVLNDAWHPWWRAEVDGRPTDILKANVLFRAVQIAPGMHRVH
                     FAFEPLQGAWEELKEKVAGVSEMR"
     gene            complement(6646..7635)
                     /locus_tag="VLJ17_14605"
     CDS             complement(6646..7635)
                     /locus_tag="VLJ17_14605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV24245.1"
                     /translation="MRATQSFLKLSLATVSVAAAVLLTPQAVIAAEKYPIRPIHLIAA
                     FPAGGAVDITARIVADWLSNDLGQQVIVENRAGSGGNIGAAAVINSPPDGYTILFAAA
                     NNSISASLYKKLPYDFLRDTTPVAGIMLITNIMVVPPTLPVKTVADFIVLAKAKPGEL
                     SFASAGNGTSVHMSGELFKLMAGIDIIHVPYRGSAPAYPDLMTAKVHVLFDNLPGSIE
                     FVRSGQLKALGVTVTNRWPTLPDIPAIAETITGFEAVPWYGISAPKDTPTDVVEILNK
                     SVTAALANPKMQAKLAELGGIPMPMSPAEFGKFLAGDTAKWAKVVKAANLSVE"
     gene            8041..8427
                     /locus_tag="VLJ17_14610"
     CDS             8041..8427
                     /locus_tag="VLJ17_14610"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HSV24246.1"
                     /translation="MKTYLATMFAGAAFIAFTGVAVAHHSFAMFDQEHPQEVTGVVKE
                     YKYTSPHSFIVLDIKDKDGNVEAWNLEGGSPSALARDGWSSKSLKPGDELRLTIEPLR
                     SGAPGGAWNVNRIKFIDGKPIVEKTQ"
     gene            8563..9420
                     /locus_tag="VLJ17_14615"
     CDS             8563..9420
                     /locus_tag="VLJ17_14615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24247.1"
                     /translation="MSLRNPVSTFTHRIAPLLAALCISLAGAFADDSRSLDKYPDLRG
                     QWNRSFVPRWTIGEEKAPLTPEYQKIYEANLADMANGGPGNVPSWYCLPQGMPMMMNA
                     YDPMEVVVTPETTYILISHVNDSYRRIYTDGRDWPDPETTLPVFAGYSIGKWIDEDGD
                     GKYDVLEVETRFLRAPHTYDAQGIPFHEDNQAVIKERIYLDKADNNLLHDDITSYDHA
                     LTRPWTKNRTYKRNANPKPVWLEEACAGDNAMVKIGNDPYFLSPDGLLMPTRKDQAPP
                     DTRYFKKKQ"
     gene            complement(9421..10464)
                     /locus_tag="VLJ17_14620"
     CDS             complement(9421..10464)
                     /locus_tag="VLJ17_14620"
                     /inference="COORDINATES: protein motif:HMM:NF039236.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HSV24248.1"
                     /translation="MFLRNFWYVAASGHEVGRKPMRRMILGEPIVFFRKEDGAPVALE
                     DRCVHRHLPLSMGKLVGDHLQCHYHGLRYDCTGQCVNVPGQNTIPPSAQVKAYPVVER
                     YHWLWIWMGDPTLANPDKITDFHWLDDPNWGAKGCYLHVKANWQLIVDNLLDLTHLAF
                     VHDSTIGNAALVENAAVKVTRAPNNVVVTRWIINAPAPPTFVRAGGFTAPVDRWQIID
                     FVPPAFLRLDVGCTPTGTGAPQGKRVGGITMRNLNAITPETETTTHYFWGQAHDWDVG
                     NRELTDMLVEQITAAFLEDVAVFEAQQRNMMLLPNAPQIDINADAGVIQARRILHRIH
                     QEELAGAATAAAE"
BASE COUNT         2004 a         3307 c         3290 g         2080 t
ORIGIN      
        1 acgcgcagct gtggatccag cacgattaca ccaccggaat taaacggaaa attgcgccgg
       61 agttttacga ctgagcgagt cttgctggaa tgggaccgat ctaatggtac tcactgcggc
      121 gtcattcccc gctgcgggga atgacagggg agggttggtg gcggtcccgc acagacgatc
      181 aattcctgat cgaacaaggc atgtccttag ttaaaaccac aagcgaccgg agttcatcgg
      241 caacgccgag cctaataacg aaacccggaa gcccactgag aagcgatcgc tttattgcgt
      301 cattcatgtc tcgccgaatt caccgaccgc gtcgaaatcg cctgcccagc gtagcctcaa
      361 caccgctcgg gatcgggtgt tagggctgat gcgctacggc gcaataagcg attgcgccgt
      421 acggcgcccg atggcagctg gctcggacaa gtcctccatt acggcgcgag caacctcgcg
      481 caatgcccag gctgtggcgg cgttgtggca atctcgccgg agatcgggat gcattgactc
      541 ggcggcagcg cggctgccgc ctcgacatgt gtgatcagca gatcaaaagc ccggtgtgcg
      601 tgcggctcaa tgagctccag ccgtgggaac gtggtcacga aggtttcgat gtgattgcca
      661 ttctgcactt catagagccg atattccggg gcgcgttgtt ccggcggacg gaccgccgag
      721 tcgtcgtgac gcaacgcagc ctcgaccctg cgggcatagg cgcgcgcatg aaggtcgatc
      781 ggcagtaggc cgtccatcgt gccggccacg gtgatcagcg gccgcttgag ccgtccggtg
      841 gtggcgaacg ccgtgatatt cgcgccaacc tcagataccg acaagcgatc gacatatacg
      901 tacgtgccag ggccagaaac gtaagtatcg taggtggggt ccagccgctt ctgccactgg
      961 catagggtga cttcccagaa ctggttccaa tgaagtcccc acagtgaagt ggtggagtcg
     1021 gggacgacca tgtcaggcgg atagccggcc tcgcggatat tcttggcagc ggtgctgtcg
     1081 aaactgaacc tggaggccag atagtccgga tagttcagga tcgcgggagg aagggcacta
     1141 agaagattgg gggcgacggg gtcgacgaag gtgccttccc aatcgacccc accgtcgaat
     1201 agctccggcg cagtctccat ggcgcggcgc acttgatagc cgccattgga ggtgccgacc
     1261 gcgtaggtgc gaacaggatg ccggccataa tgactttcaa gggcatcacg tccgatcttg
     1321 gtcgccgcca acatgatttc gttccagcgc gtgaacaccg cgcccggatc attgtcgtag
     1381 aaatgcacga aggttcccga cgtcgggttg agccgacacc ccaaaggatc ggccgccgtc
     1441 gacacaaaca gattgtagat gcccttgttc tgcgaaatat aggcatagcc tttttgtata
     1501 acgtaatcgc tccaagcaaa gtcgccgttg aactcgctac gcgtgcccga tgcgccggcc
     1561 acgaccagtt tgccattcca gtcatcgggc aggcggatca ggatgcgcgc ttggccgaga
     1621 ggatcgtcgg cgatacgcgc ctgcatctgt accccttgca ccgccctggt gatgggtgtg
     1681 cgaaaaccgg gcggaggtgc gatcacattg cgatcggtct gcggcgtgaa cgcaaatggc
     1741 ggcaggccgg gcagtgagtc gttggcgggc gtcgtggccg gattggcagt ggtgagatca
     1801 ctgctttcaa agcaagttac gtcggcgatc ttggttttta gcagttccaa gaggcgatcg
     1861 catcgcgcag cagctgaagc cggcatgttg ctggcggcga aaaccgtcag cacggcgaaa
     1921 acgatcgatc ggagagcatg tgaacggtgc atgcgggtcc ctcacgtttc atttttgcaa
     1981 aaatgcggcg aagcgatttg ggagagccaa actatagcaa cagtcgatcg gggtgaaggt
     2041 ggtcgccaca gtggccacgc cggttacgtt gtgggcgcag ctcctgcaga ctgctcgata
     2101 gggcccctgc tactcgcaga atcccgcagc tcgcaaaatt ggtatcgata cgcagggcaa
     2161 tctcgatcaa agcaccggcc gacgctgtgt cggatgcgct ccgcgatatc ggcgcccttc
     2221 acaccccatt ggtccccgga ttcgtaaccg acacgcgtct tgagccgggt gcgcacgtat
     2281 cgtgacgttc ggcaacggta tggtggtccg cgagctgatc gtgacagtcg atgatggtga
     2341 ggtgtcgtct ggtctgcggt cggcggatcg ctaacgcacc acaatgggtc ggcccaggtc
     2401 ttttcggatg caaatggact gaccaaggtt gtctggactg ccgatcttct ccggggcgaa
     2461 gccaccgctg gcccagcgcc gtgatggaac aaggcttggc gccgatgaag caaactctgg
     2521 atcgcccctc tgtcgagggc aaagtcagag ccggtgacac gctggccgat ttctagtcca
     2581 ccgtccttgc cgcctctgtt gccacccgct acgctcgcca caaacaaata gacatcaccc
     2641 gccgagcaac aggatttgtc aggcggcctg tcgaaggtgg atgctttgag cacgctgaag
     2701 gcggctgtga aacctttaca acctcattct gaggaacacg ctcctgcctg cgtctcgaag
     2761 gatggcagcg agtctgtgct gtgcatccgc ccttcgagac ggctgcagag cggcctcatc
     2821 aggatgaggc tggagttatt caccgcctgc tcgatcattg ccgcgctagc gatctgcctc
     2881 cccaccctcg cccaagcccc ctacccgtct cgcccgatcc ggctgatcgt gccgtttccg
     2941 ccaggtgggc cggtcgacgt tatggcgcgg ttcgtggtgc agcggcttgg cgccgcgctc
     3001 ggccaagtca tcgtcgataa ccggcctggt gccggcggca ccatcgggtc gaaggctgcg
     3061 tcgcttgccg agccggatgg gtacacgctg ctgttcggct catcgaccac tcttgcggcc
     3121 gggccttcgc tctatcgcaa tctcggctat gacccggtga agagcttcgt gccggtcggc
     3181 atgatctcca gcgtgccgtt cgtgctcgcg gtcgcgccgc atgtgccggc gacgacgctc
     3241 gccaacctcg tcgcccacgc caaggccaat cccggcaagc tcaactttgg cgcccctacc
     3301 ggcacgctgc cgcaccttac ggctgagatg ttcaagctgc gcgccggcat caatatggtg
     3361 cacattccct acaagggcgc cgcgagcgcc atcacagacg tactctcggg tgaaatggac
     3421 atggcgttcg agccgatttc cgtgatggtc gcccatgtgc gcgacggcaa ggtgcgcccg
     3481 ctcgccatca cgggcgctga gcgaagcctc gagttgcccg acgtgcccac catgatcgaa
     3541 agcggctatc cgggcttcgt gtcgatgtcg tggaccggca tcgtggcccc cgccggcacg
     3601 ccgcccgaag tggtggcgaa gctcaaccgg acgatcatcg aaacattccg ctcaaaggac
     3661 gcccaggacg ggcttgcccg catgggcgcc gagccgaaat tcggcacgcc cgaaagcttc
     3721 ggcgctatga tcgcggccga gatcccaaaa tgggccgaga ccgtccgcgc cgctggcctg
     3781 cggctggatt aagatgcaag ctgctctgct cgacggcgcg gcgctgtcgt ggccatgggc
     3841 gatccctttc gtcggacttt tgcttgccat agcgctggcg ccgagcctgc gtccgtgctt
     3901 gttggcccgc cactgtggca agatcgcggc cagctggtcg gcgacggccg tcgcggcgat
     3961 cgccctttca gccggcatca ccacggcacg cgataccgcg ctacacgcga tgctcaccga
     4021 ttacctcagc ttgccgccta tgtattcttc agatgaggac ttcatttaga atgcggccgg
     4081 gttcatcaag ttcgcgcgca agcaccttgg caccgtcggt gcttgtttac actgcggcat
     4141 ttgccgtctt ggcctggccg tggctttccg gtgcggtgac gataccgtgg gatgccaagg
     4201 cgcagtttca ggcggaattg cagttcctcg cagcctcgct ggcccggggc gaatcgccat
     4261 tctggacccc caacttgttc gccggctggc cgcagatcgc cgatccgcaa tcgctgatct
     4321 tctcgccgct gcatgtcgca cttgcggcgc tcgacccgac gccgagtttt cgcgaggccg
     4381 atttcgtcac cttcgcgtat ctgttcgccg gcggcctcgg cctcataatg ttcttccgcg
     4441 accgcgactg gcagcccggc gcggcggtga tcgcggcgct gatcttcgcg ttcggcggct
     4501 cggcagcatc gcgcctgcag cataccagcg aaatcaccag cctctcctat gtgccggtcg
     4561 cgctgtggct cctggcgcgc actttggacc gcgcatcatg gcgcaccggc cttgcggccg
     4621 gcgtcgtcat cgccctcctg atcgtcggac gcgaccaggt cgcgctgctt ggactttatg
     4681 tgcttgccct ttatgtcatc gcgtggtggc tcgatggtga ggggcggctt atgcgcatca
     4741 aacgcgccgt gcttccgctt gccgcttgcg ccgcgaccgc agtggtgatc gcagtcgttc
     4801 cagtggtgct ctcggcgctg ctcgccgccg acagcaaccg tccgatggtc ggcctggagc
     4861 gcgcggggcg cggttcgctg catccagtgc tgctgctgat gctcgtgttt gccgacctgt
     4921 tcggcgcagc cgatccgaat gtcgacttct ggggcccgcc tagcgccgcc tgggacgcca
     4981 ggatgggaaa cggcatcaat ctggcgcaga atatgggcga gatctattgc ggcattctcg
     5041 cggtggtcct gatcctcggc accgggattg tccgcgggct ggcgtgggcg cgcgagattc
     5101 ggttcttcac gtgggcgctg gtgtttgtcc tgctttatgc actcggctcg tatacgccgg
     5161 cattccgcct gatgtacgac gtgctgcccg gcgtcgagct gtttcgccgg ccggccgacg
     5221 ccaccttcat catcgggctc ttgatcgcga tcgaggccgg atatctcgtc caccgcgtcg
     5281 tttccggcac ggcgccgcag ccgcgctggt tttgcgcggt cgacgtcgca atcgttagtg
     5341 cgctggcggc taccgcgatc gcggtggcgc acaaggtcgg caatctcgac gttgccatgt
     5401 ggcccatagc aaccggcatg gcgttcgcgg tcaccgcgat cgcgctcctc ggattgacgc
     5461 ggcaactcgc accggcgcgc cctgtgttgg cgtcggcgct gctttttggc ctcaccattt
     5521 tcgacctcgt ctggaacaat gcgccaaacg agtcgaccgg gttgccaccg caacgctatg
     5581 atgcgctccg tccccaaacc cgcaatgaga ccgtcgctct tatcaagacc aagctcgccg
     5641 agaccttcgg ccccgaccgc cgcgaccgcg ttgagttgat cggcattgct tatcactggc
     5701 ccgacttggc gctcgcccag ggcttcgacc atctgttcgg gcacaatccg ctgcgcctgc
     5761 acgacttcgc gctggccacc ggtgtcggcg acaccgttgc ggagccacgg cagcgcacct
     5821 ttgcgccgtt gtttccctcc taccgctcca ccatggccaa cctgtgcggg gtgcgcttca
     5881 tcgtcaccgg cgtgccggtc gagcgcatcg atacttcgct ccgtgcaggc gacctaacgc
     5941 ccgtcgcgcg caccgcggag gcctatgtgt acgagaaccc gcgggcgctg ccccgcgtca
     6001 tggtcgtgcc ggactaccag attgccgatt tcggcgacat gatccgcaac ggctggcccg
     6061 atatcgatcc gcgccgcacc gtgctgctgg agcaaccgcc aaccgtgatg ccgcgcgcag
     6121 gggattccaa agccgtcgac ggcagcgccc gcatccggcg ctacgcgaac accgagatcg
     6181 acctcgaagt cgatgcgccg gatggcggct tccttgtcct caacgatgcg tggcatccct
     6241 ggtggcgcgc cgaagtcgac ggccggccga ccgatattct caaggccaac gtgctgttcc
     6301 gcgccgtcca gatcgcgccg gggatgcatc gcgtgcattt cgcgtttgaa ccgctgcaag
     6361 gggcgtggga ggaattgaag gaaaaggtcg ccggggtgtc ggagatgagg tgacaagatc
     6421 gtgtagggtg ggttgagatc ctatgcaggc gcggcggcgg ggcttgacag cgccctcaca
     6481 tccgtaacca agggctacca acatcgctaa agtaccggaa aataacccct gaccccaacg
     6541 cctagcgcaa acgaaaccca tcatggccgc accgcgtgag ccgggatggg ttttgcaaga
     6601 gttcacccca tcccatgcgc tccgctgttg agcggcgacg agcaatcact ccaccgaaag
     6661 attggcagcc tttaccacct tggcccattt cgcggtgtca cccgcgagga acttgccgaa
     6721 ttcggctggc gacatgggca tcgggatgcc gccgagctcg gcgagcttcg cctgcatctt
     6781 tggattggcg agtgcggccg taaccgactt gtttagaatt tcgacgacgt cagtcggcgt
     6841 gtccttcggg gcggaaatgc cgtaccacgg caccgcctcg aagccggtga tcgtctccgc
     6901 aatggccgga atatccggca gcgtcggcca gcggttcgtc accgtcacac cgagtgcctt
     6961 caactggccg ctgcgcacga attcgatcga gcccggcaga ttgtcgaaca gcacatggac
     7021 cttggcggtc atgaggtctg gataggcggg cgcggagccg cgatacggca catgaatgat
     7081 gtcgatgccc gccatcagct tgaacaattc gcccgacatg tgcaccgacg tgccgttgcc
     7141 cgcggacgca aagctcagct cgccgggctt tgccttggca agcacgatga aatccgccac
     7201 cgttttgacc ggcagcgtcg gcggcaccac catgatgttg gtgatcagca tgatgccggc
     7261 gaccggggtg gtatcgcgga gaaaatcgta aggcagcttc ttgtaaagcg atgcgctgat
     7321 cgaattgttc gcagcggcga acaggatggt gtagccgtcc ggcggcgaat tgatcacggc
     7381 tgccgctcca atattgccgc cagagccggc gcggttctcg acaatgacct gctggccgag
     7441 atcgttcgat agccaatccg ccacgatccg cgccgtaatg tcgacagcgc cgccagccgg
     7501 gaaggccgcg atgaggtgga tcggccggat ggggtatttc tcggcagcga tcacggcttg
     7561 cggggtgagc agaactgcgg cggcaacgct tacggtggca aggctaagct tcaggaaaga
     7621 ttgcgtggcg cgcatgcgtt cctcctcggg tcgaggaata tcgagcttgt aaaactaaca
     7681 gtttgtgcag cgctgcgata ccggcccgtt ggccgacgca ctactgcagc gcgcgtctgg
     7741 ctcgctctgg tggacgtccc ctgtgcggtc cgcgcctcgc cgcgcgacgt ctggtcggca
     7801 gcgccagctg gcttcccttt tgcgcttgca gggagagcga gcaatgtcac tcatctcgca
     7861 ggttgccggc cgccgtgcca gatgcgatcg tcctgcgttc gaagcgccca accccttctc
     7921 gtcagccgcc gagtggtgta ttttgccgtt gagccgtcgt cgcatggcgc atgctgaagt
     7981 cttcgatgtc catgcatccg atatcagtga gctagtgaaa aattcgaacg gaggaaatgc
     8041 atgaagacct atcttgccac gatgttcgcg ggtgctgctt tcattgcctt caccggtgtg
     8101 gcggtggccc atcactcctt cgccatgttc gaccaggagc acccacaaga agtaaccggg
     8161 gttgtcaaag aatacaaata caccagtcca cactccttca tcgttctcga catcaaggac
     8221 aaggatggaa acgtcgaggc gtggaatctc gaaggcggca gcccgagcgc acttgcccgc
     8281 gacggttgga gcagcaagtc gctcaagccc ggagacgaat tgcgcttgac catcgaaccg
     8341 ctgcgcagcg gcgcgcccgg cggcgcctgg aacgtgaaca ggatcaagtt catcgacggc
     8401 aagccgatcg tcgaaaagac gcagtgaggc gaccgcagag ggggttaagc tcctgcgaaa
     8461 cctaacggag gttgcgctgc gcggtcaggc ggtcatgggt ttcgcggctc aatccgtcct
     8521 atgcgtccgg gcggacccat cttcgcgaag gagaggagcg tgatgtcact acgtaacccg
     8581 gtcagcacat tcactcatcg tatcgctccc cttctggcag cgttgtgcat atcgctcgca
     8641 ggcgctttcg ccgacgactc caggagcctc gacaagtatc cggacttgcg cggccaatgg
     8701 aaccgttcgt tcgtgccgcg atggacgatc ggcgaggaga aagcacccct tacccccgaa
     8761 taccagaaga tctacgaagc caatttggcc gacatggcaa acggtggacc cggcaacgtg
     8821 ccatcatggt attgtctacc gcaaggcatg cccatgatga tgaatgccta cgatccgatg
     8881 gaagtggttg tgacccccga aaccacttac attttgatca gccacgtcaa tgattcctat
     8941 cggcgcatct atacggatgg acgcgattgg cctgatccgg agactaccct gccggtgttc
     9001 gcgggctact cgatcggcaa atggatcgac gaggatggcg acggcaaata cgacgtactc
     9061 gaagtcgaga cccggttcct ccgcgcacca cacacctacg acgcccaagg cattcctttc
     9121 cacgaggaca atcaagccgt catcaaggag cgaatctatc tcgataaggc cgataataat
     9181 ttgcttcacg acgatattac atcctacgat catgcgttga cgcggccgtg gaccaagaat
     9241 cggacctata aacgcaatgc gaaccccaaa ccggtctggc tcgaagaagc ctgcgctggc
     9301 gacaatgcca tggtcaaaat cggcaatgat ccctattttc tgagcccgga cggactcctg
     9361 atgcccaccc gaaaggatca ggcgccgcca gacacgcgat atttcaaaaa gaagcaataa
     9421 tcattccgcc gccgccgtcg cggcacccgc gagctcctcc tgatggatac gatgcaagat
     9481 gcgacgtgcc tggatcacgc cggcatcggc attgatgtcg atctgcgggg cgttcggcag
     9541 cagcatcatg ttgcgctgct gcgcttcgaa caccgccaca tcctccagaa acgccgcggt
     9601 gatctgctcg accagcatat cggtcagctc cctattgccg acgtcccaat catgggcttg
     9661 gccccagaaa tagtgcgtgg tggtctcggt ctccggcgtg atggcgttaa gattgcgcat
     9721 ggtgatgcca ccgacccgct tgccttgcgg tgcgcccgtc ccagtgggcg tgcagccgac
     9781 atcgagccgc aggaaagccg gcggcacgaa atcgatgatc tgccagcggt cgaccggcgc
     9841 ggtgaagcct cccgccctca cgaatgtggg cggcgccggt gcattgatga tccagcgggt
     9901 caccaccacg ttgttcggcg cgcgcgtcac cttgacggcg gcattttcga ccagcgccgc
     9961 attgccgatg gtggagtcat gcacaaaagc cagatgggtg agatcaagta aattgtcgac
    10021 gatgagctgc caattggcct tgacatggag atagcagccc ttggcgcccc aattgggatc
    10081 gtcaagccaa tggaaatccg tgatcttgtc cgggttggcg agcgttggat cacccatcca
    10141 tatccatagc cagtgatagc gctcgaccac cgggtaagcc ttaacctgcg ccgacggcgg
    10201 aatggtgttc tggcccggca cgttgacgca ttggccggtg cagtcgtaac gcaggccgtg
    10261 gtagtggcat tgcaaatgat cgccgacaag cttgcccatg gagagcggca ggtggcggtg
    10321 gacgcagcgg tcctccagtg cgacgggcgc gccatcttcc ttgcgaaaaa atacgatcgg
    10381 ctcgccaagg atcatccgcc tcatcggctt gcgcccgacc tcgtggccag aggcggcgac
    10441 gtaccagaaa tttctcagga acatgggcgt gcctccgtga gggagaattt tagcgttggc
    10501 ggcgggattt tcaaatgcaa cggcaagatg cccattaccc gtagggtggg ttgagcagaa
    10561 cccatcatcg accacgccgc caggaaaggc ccaagatggg tgttgcaaga gcccaacccg
    10621 tcctcgctag gcacgggacg ccccatcgca aaaggcgtcg atttcgtgta ggtcggaagt
    10681 c
//
LOCUS       DATILV010000622         9158 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3986514, whole genome shotgun sequence.
ACCESSION   DATILV010000622 DATILV010000000
VERSION     DATILV010000622.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9158
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3986514"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..184
                     /locus_tag="VLJ17_14625"
     CDS             <1..184
                     /locus_tag="VLJ17_14625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24249.1"
                     /translation="LTSGSRAIFSGWWMRVGDPRVVAQLLKQLLETSFKGRQAKVGAA
                     EEDGKIIVRRLGAGSN"
     gene            746..6649
                     /locus_tag="VLJ17_14630"
     CDS             746..6649
                     /locus_tag="VLJ17_14630"
                     /inference="COORDINATES: protein motif:HMM:TIGR03661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I secretion C-terminal target
                     domain-containing protein"
                     /protein_id="HSV24250.1"
                     /translation="MAGIPPVIDVTNINGSNGFRILGSSPEEEAGSSVSVGDINGDGL
                     ADVIVGAPGIASFGSGFGVVDYSAYVIFGRGSDDIPIASTVSTANLDPTAGLRIAVGV
                     VDIYSIQNDAQQGYAVSYAGDFNGDGIGDFMVSAPSYGTNQQGATYIVFGNAGGTPTS
                     KIRIDGGEAAGIVGDRSGHSVAALGDVNGDGFDDVLISSPGAAGDGRWASGVSYVVYG
                     NASGANIDLANFNASEGFRIIGSQFESIGQSVSAAGDVNGDGRMDLLIGVSNAGSDGN
                     WLAGSTYLVYGSDSGADVDLANLTPSQGVRFDGEFESQSGFSVSAAGDVNGDGLADII
                     IGAPSPSSFPGQGGGSAFVVFGKTGGLSNIDLTNLGPGDGFRINGAAVGDAAGYSVSS
                     AGDFNGDGFGDLIIGAPDADPDGNTNAGSAYVIFGKASGFGDIDLANLSAADGFRIDG
                     PSGVQGNLGFELPAHLGTSVAGAGDINGDGYSDIVVGAPGYSLVEGAAYVIYGEASGA
                     VNKVGTSGDDRLFGGDFDDTLSGGDGNDALGGKGGNNVLTGGGGSDAFVYALSDQHHD
                     VITDFQQGEDVIDLRAANISDFATVQQLLSNDAQGNAVITTVSNGVTSTMTLTGISAA
                     QLTAADFTFAGNSAQTLNGSDSADDLFGGAGGDILNGNAGDDRLFGEQGSDTLSGGAG
                     NDSLFGGQDNDSLGGGAGADLLDGGAGIDGATYSTAPAGVTASLASGGTGGDAAGDVY
                     VSIENMWGSNFDDVLEGDDQANRIFGLEGNNVIRGGGGNDQLFGGSGNDTFYGGAGAD
                     KIDGGSGVDYARYDDATTGVTVGFASAAGSNDGTGDTLLNIDGIIGSAFADKLGGTNA
                     TEDLQGGGGDDLLQGRGGNDTLDGSDGVDQAVYSGSRGEYFVAFDAATGAYVVKDLRQ
                     GSPDGTDHVRNVETFVFADGAISADSVLDGNPGPIIGDDGNNPLTGTSIANEIRGLGG
                     NDTLAGLAGEDLLDGGDGDDTLDGGTGVDSATYASAGAGVTVSLAIAGAQNTGGAGTD
                     TLVSIENLTGSAFDDQLTGNAGANVLSGLAGNDRLDGAGGTDTLLGGDGNDIFIGGVP
                     GSILDGGAGFDLVSYETSTTGMYIDLGERAISGHFVSIEGVIGSSFGDTITGSGADET
                     IIGGGGNDVVYASGGTDSISGGVGDDTFFDMGGVEHFDGGDGVDLVAYLAVPVEVTID
                     PATYSYVITGEGITADLADPSRNTGFAAGDTYDSIEVLIGSYVNDDLAGDEQDNTLRG
                     SLGDDVIWGRGGNDLLEGDVGNDRLIGGAGADVLYGNIDFLGQLDLIGRLLGPIGAGL
                     IQQAKDMAAGDPVFSAGDGFDVASYETATSGVVASLTNPAINTGDAAGDTYILIEGLA
                     GSAFDDTLIGTAGWGAQGHNSLEGGAGNDTLIGLGGDDNYDGGAGDDTAVLPERRDAY
                     TITYDTATQTFTLKSAVNVTHVTGVETLQFADGTLSVASLFAGGDNDDSLTGTAGQDD
                     LNGGGGNDTLRGLGGDDRLDGAAGDDLLSGGDGNDTLIGGVGRDAASYADATAAVRVD
                     LGVSGAQATGGGATDTLTGIEDVVGSAFGDTLIGNAGDNALRGGAGDDLLIGLGGNDT
                     FDGGAGIDTVSFADVNSVTTVDLALTGPQSVGGFEGLDTFVKVENIVASMYWGGTLKG
                     DSGANHLTGGINPSTLMGRGGDDVLDGANGWQDTASYAEASAGVTVDLAISGPQSTGE
                     GSDTLIGIENLTGSAFADTLKGTSGDNVLIGGAGDDTLVGAGGSDRLDGGDGIDTVSY
                     AGAATGVQIDLNAGYYFFNGASTDWLVSIENLAGSAFADTLTGNAGANALSGGGGNDR
                     LTGGLGRDVLTGGAGNDVFDFNALKETSVGTGARDVITDFELGLDHIDLADIDANATR
                     AGDQAFKLIGTQGFGGKAGELHYQTFDQPGTANDVTVVSGDINGDRIADFEVEITGIV
                     NLKASDFLL"
     gene            complement(6779..6981)
                     /locus_tag="VLJ17_14635"
                     /pseudo
     CDS             complement(6779..6981)
                     /locus_tag="VLJ17_14635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509368.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
     gene            7659..7946
                     /locus_tag="VLJ17_14640"
     CDS             7659..7946
                     /locus_tag="VLJ17_14640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24251.1"
                     /translation="MNIFGLLMAGLSVLAWLVCLVAWSIFVYRLFAFVWRNWAGTSSQ
                     FPVPRRFADAMSLLVSFHRGKAFKAGVVFLISFAIGVLLVILGNWFGGWQG"
     gene            complement(8063..8428)
                     /locus_tag="VLJ17_14645"
     CDS             complement(8063..8428)
                     /locus_tag="VLJ17_14645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24252.1"
                     /translation="MTKLRYATAAHEAGHAVVGWELGLPVELSRTIADRGLPIRASKS
                     LVALQQGRRSADGGSRGSPSGQNRGAHSAMVEPVPGRPFNEAEALAWLRSQAGGRVTA
                     SAAELGRQWAGTEYGPAGA"
     gene            complement(8559..8735)
                     /locus_tag="VLJ17_14650"
     CDS             complement(8559..8735)
                     /locus_tag="VLJ17_14650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24253.1"
                     /translation="MSNKADDLRKQAEIEIKAAGQSKSLRDGVSHRRRGKALNDMADT
                     EDRLESKTKPEAKD"
BASE COUNT         1664 a         2816 c         2965 g         1713 t
ORIGIN      
        1 cctgacgagt ggtagtcggg cgatattctc tggctggtgg atgcgggtgg gcgacccgcg
       61 ggtggtagcg cagctactga agcaactcct tgaaaccagt ttcaaggggc gccaggcgaa
      121 ggtgggcgcg gccgaggagg atgggaagat aatcgttcgg cgattaggcg ctggttccaa
      181 ctagtttgga tcgatggctg cgtgagagtt gtgctggcgc cgctctctac gccacgacgt
      241 cgcccgtaag cttcgagcaa catatcggca gataattgcc gctcgcagtg atgccccgct
      301 cgaccggcat cagccagaat acctgccttc gggcaacaac cgcccctttt ccggtttggg
      361 ctagtacggg ttgttcccgg ctgggcggaa gcgtcgtgat tctcgcacga taatccagac
      421 tttcatacca caacgcatca cagcatctta tgatactgat cgcagcgttt gtggcggcgt
      481 tgcacgtcgg caacaactct cggccaatta atgccgagca ctcggcctgt cacgctttcg
      541 ccaaacatgt ggcgctatca gcggcgcaaa ccttcgtggg ctgttacgag ggtcgtagcg
      601 cgttttctaa ctcggtgtat cacgttttct gacttgatcc ccttcaaacc tgttgtgccg
      661 atcacggtgc agcggaggtt acgcacgtcg cgacgtcgac gggaccgccg tgatgcgtgc
      721 gttgcctcaa cagtgggagg ctgtcatggc tgggattccg cctgtcattg atgtcacgaa
      781 catcaacgga tcaaacggat tcagaattct tggatcgtcg cccgaggagg aggcgggctc
      841 gtctgtcagc gtcggcgata tcaacggcga tggccttgcg gacgtcatcg tgggcgcccc
      901 gggcattgcc tcgtttggat ccgggtttgg ggtggtcgac tacagcgcct atgtgatttt
      961 cggtcgcggc agtgacgata ttcccatcgc ttctactgtc tcgacggcaa acctcgatcc
     1021 caccgcggga ttgcgcatcg ccgtcggcgt cgtcgatatc tatagcattc aaaacgacgc
     1081 gcagcagggc tatgccgtct cctatgcggg cgacttcaat ggcgatggga tcggcgattt
     1141 catggtgtcc gcgccatcct acggcacgaa ccagcaaggc gccacttata tcgtctttgg
     1201 caacgccggt ggtacgccca cctccaagat acgcatcgac ggcggcgaag cggctggcat
     1261 agtgggcgat cggagcggcc attccgtagc ggccctcggc gacgtcaatg gcgacgggtt
     1321 cgacgatgtc ctgatcagct cgcctggtgc agccggcgac gggcgctggg cgtcgggcgt
     1381 cagctacgtg gtttacggca acgcctcggg cgccaacatc gacctcgcaa atttcaacgc
     1441 gagcgaaggt ttccgcatca ttggctcgca gttcgagagt atcgggcagt cggtttctgc
     1501 ggcaggggac gtgaacggcg atggccgcat ggatctcctc atcggcgtga gcaatgccgg
     1561 ctccgacggg aactggctcg ctggctcgac ctacctcgtg tacggaagcg attccggagc
     1621 cgacgtcgat ctcgccaatc tgaccccgag ccaaggcgtt cgtttcgacg gcgaattcga
     1681 aagccagagc gggttctcgg tttcggctgc aggcgacgtc aacggtgacg ggcttgccga
     1741 catcatcatc ggagcgccgt cgccgtccag cttccctggc caggggggcg gctccgcgtt
     1801 tgtagtgttc ggcaaaaccg gcggcctgtc gaatatcgat ctgaccaacc tcgggcccgg
     1861 cgacggcttc cgcatcaacg gcgccgccgt cggagacgca gccgggtact ccgtttcctc
     1921 cgccggtgat ttcaacggcg acggttttgg cgacctgatc attggggcgc ccgacgcgga
     1981 cccggacggt aatacgaacg caggctcggc ctacgtcatt ttcggcaagg cttccggatt
     2041 tggcgatatc gacctcgcca atctgagcgc cgccgacggg ttccgcatcg atggcccttc
     2101 cggcgtccaa ggcaatctag ggttcgagct tcccgctcat ctggggactt cggttgcggg
     2161 cgccggcgac atcaacggcg atggatacag tgacatcgtc gtgggagcgc ccggctactc
     2221 tctcgtggaa ggcgccgcct atgtgatcta cggcgaggcc tcgggcgccg tcaacaaagt
     2281 gggaacgagc ggggacgacc ggctctttgg cggcgacttc gatgacacgc tgtcgggcgg
     2341 agacggcaac gatgctctcg gcggcaaagg gggcaacaac gtcctgaccg gcggcggggg
     2401 cagcgacgcc ttcgtctacg ccctctccga ccagcaccac gacgtaatca ccgattttca
     2461 gcagggcgag gacgtgatcg acctccgggc cgcgaatatc agcgatttcg caacggtgca
     2521 gcaactcctg tcgaacgacg cgcagggcaa cgccgtcatc accaccgtgt ccaatggcgt
     2581 cacgtcgacg atgacgctga caggcatttc ggcggcgcag ctgacagcag ccgatttcac
     2641 cttcgcgggt aacagcgccc agaccctgaa tgggtcagac agtgccgacg accttttcgg
     2701 cggcgccggc ggtgacatcc tgaacggcaa cgcgggcgat gatcgcctgt tcggcgagca
     2761 aggctccgac actttgagcg gcggcgccgg caatgacagc ctgttcggcg gtcaagacaa
     2821 cgactcactc gggggcggcg ctggagccga ccttctcgat ggcggcgccg gcattgatgg
     2881 agcaacctac agcacggcgc cggctggtgt caccgccagt ctcgccagcg gtggtactgg
     2941 cggcgacgcg gcgggcgatg tttacgtctc catcgagaac atgtggggct ctaatttcga
     3001 tgatgtcctt gaaggggatg atcaggccaa cagaatcttc gggctggagg gcaacaatgt
     3061 cattcgcgga ggcggcggga atgatcagct ctttggcggt agcggcaacg atacgttcta
     3121 cggcggcgct ggcgccgaca agatcgacgg cggcagcggc gtcgattatg cccgctacga
     3181 cgatgcgaca accggggtga ccgtcggctt tgcttcggct gcggggagca acgacgggac
     3241 gggcgacacg ctgctgaaca tcgatggcat catcggctcc gcttttgcgg acaagctggg
     3301 aggcacgaac gcaacggaag acctccaggg cggaggaggc gacgacctgc tgcaggggcg
     3361 cgggggcaac gacacgctcg atggtagcga cggcgtcgac caggccgtgt acagcggatc
     3421 gcgcggcgag tacttcgtcg cgttcgacgc tgccaccgga gcctatgtcg tcaaggatct
     3481 gcgccaaggt tcgccggacg gcaccgacca cgtgcgcaac gtcgagacgt tcgtcttcgc
     3541 ggatggcgcg atctcagccg actccgtgct cgacggcaac cctggcccca tcatcggcga
     3601 cgacggcaac aacccgctga ccggcacgtc gattgcaaac gagattcggg ggctcggcgg
     3661 caacgacacc ttggccggtt tggccggcga ggatctgctc gatggtggcg acggcgacga
     3721 cacgctcgat ggcggcaccg gtgtcgactc cgcaacctat gcgtcggcgg gagcgggcgt
     3781 gacggtcagc ctcgccattg ccggcgccca gaacacgggc ggcgccggca ctgacacgct
     3841 ggtgtcgatt gaaaacctga ccggcagtgc ctttgacgat cagctgacag gcaatgctgg
     3901 cgccaatgtg ctcagcggtc tggccggcaa cgaccggctc gatggcgcag gcggcaccga
     3961 cacgctgctc ggcggcgacg gcaacgatat cttcattggc ggagtccccg gaagcatcct
     4021 tgacggcggc gcgggattcg atcttgtcag ctacgagacc tcgaccaccg ggatgtatat
     4081 cgacctcggc gaacgcgcaa tcagcggcca ctttgtcagc atcgagggcg tgatcggctc
     4141 cagcttcggc gacaccatca ccgggagcgg cgccgacgag acgatcatcg gtgggggcgg
     4201 caacgatgtc gtctatgcca gcggcggaac ggacagcatc agcggtggcg ttggtgacga
     4261 taccttcttc gacatgggcg gcgtcgagca cttcgacggc ggcgatggcg tcgaccttgt
     4321 ggcctacttg gccgttccgg tcgaagtgac cattgacccg gcgacctaca gttacgttat
     4381 caccggcgag ggtataaccg ccgatctcgc cgacccctcg cgcaacaccg gttttgccgc
     4441 cggcgacacc tacgacagca tagaggttct gatcggctcg tacgtgaacg acgatctggc
     4501 gggcgacgaa caggacaaca cgcttcgtgg aagcttgggc gatgatgtta tttggggccg
     4561 cggcggaaac gatctcctcg agggtgacgt gggcaacgat cgcctgatcg gcggtgccgg
     4621 cgccgatgtc ctctatggca acatcgattt tcttggccaa ctagacctca tcggtcgcct
     4681 gctcggcccc atcggcgccg gtctcatcca acaagccaag gatatggccg ccggggaccc
     4741 ggtattcagc gccggtgacg gtttcgacgt ggcgagctac gagaccgcaa cgagcggcgt
     4801 cgttgccagt ctcaccaatc ccgcgatcaa taccggcgat gcggcgggcg acacctatat
     4861 cctgatcgag ggcctcgccg gatcagcctt cgacgacacg ctgataggca ccgcgggctg
     4921 gggcgcccag gggcacaact cgctcgaggg tggcgccggc aacgacacgc tgatcgggct
     4981 cggcggtgac gataattatg acggcggcgc gggcgacgac acggccgtcc tgcccgagcg
     5041 ccgcgacgcc tacaccatca cgtacgatac tgcgacgcaa accttcactc tcaagtcggc
     5101 ggtgaatgta acccacgtaa cgggggtcga gacgctgcag tttgccgacg gcacgctgtc
     5161 ggtcgcttcg ctcttcgccg gtggtgacaa cgacgacagc ctgaccggaa cggcggggca
     5221 ggatgacctc aatggagggg gcggcaacga cacgcttcgc ggcctcggtg gcgacgaccg
     5281 gctcgacggc gccgccggcg atgacctgct ctccggtggg gacggcaacg acacgctgat
     5341 cggcggcgtc ggtcgcgatg cagcgtccta tgcggatgcg acggcagctg tgcgtgtcga
     5401 tctcggcgtg agcggcgcgc aagcgaccgg cgggggcgcg acggacacgc tgacggggat
     5461 cgaggatgtc gtcggctccg ccttcggcga cacgctgatc ggaaatgccg gcgacaacgc
     5521 gctgcgcggc ggcgccggcg acgacctgct gatcggcctc ggcgggaacg ataccttcga
     5581 cgggggcgcc ggcatcgata ccgtctcctt cgcagatgtg aattctgtca ccacggtcga
     5641 tcttgccctc accggcccgc aatccgtcgg cggattcgaa ggtctcgaca cgtttgtcaa
     5701 agtcgagaac atcgtcgcct cgatgtactg gggcggcacg ctcaagggcg acagcggggc
     5761 caaccacctc acgggtggca ttaatccgtc cacgctcatg gggcgcggag gagacgatgt
     5821 tctcgacggg gctaatgggt ggcaggacac cgcctcgtat gccgaagcct cggccggagt
     5881 cactgtcgac cttgcgatca gcggtccgca gagcacaggc gagggttcgg atacgctcat
     5941 tggcatcgaa aacctcacgg gctccgcttt cgccgacacg ctcaagggca cgagcggcga
     6001 caacgttctc atcggcggtg cgggcgacga cacgctcgtc ggcgctgggg gcagcgatcg
     6061 gctcgacggc ggcgatggga tcgataccgt ctcctacgcc ggcgccgcga ctggcgtgca
     6121 aatcgatctc aacgccggtt actatttttt caacggcgcc agcacggatt ggttggtcag
     6181 catcgagaac ctcgccggct cggcgttcgc cgacacgctc accggcaatg ccggcgccaa
     6241 tgccctaagc ggcggcggag gcaacgaccg gctgaccggc ggcctcggcc gcgatgtgct
     6301 aacagggggg gccggcaacg acgtgttcga ctttaacgct ctcaaagaga cgtcggtcgg
     6361 gacgggcgcc cgcgacgtca ttaccgactt cgagttggga ctggaccaca tcgatctcgc
     6421 ggacatcgac gcgaacgcga cccgtgcggg cgaccaggcg ttcaagttga tcggcaccca
     6481 gggctttggg ggcaaagcgg gcgagttgca ttaccagacg ttcgaccaac ccggcaccgc
     6541 caacgacgtc accgtcgtga gtggcgacat caatggcgac cgaatagccg acttcgaggt
     6601 cgagatcacc ggcattgtca atttaaaggc gagcgatttc ctgttgtgac ctgcccgtcc
     6661 cacaggcttg aaatcgaacc gagcgacggt gtcatcgatt gaagcaggga gtgtgcgatg
     6721 acggaaccgc taaagtgggg acccgaattt ctagtgcaca ccacgacggt gcgccagtgg
     6781 tcatcttggc gtcgccgaac acgctcggcc attcaccgaa ggcgaggttc gtggtgacga
     6841 tgattgaggt tcgctcgtat agccgactga cgaggtggaa caggagttgg cctccagcct
     6901 gggcgacggc agatagccga gctcgtcgag gatgacgaag tccatgcgag tcagatggtc
     6961 ggcgagcctg ccttggcgac ctgtccgtgc tcaaaactcc gaagcgcgcg atcttttgtt
     7021 cgcctctgca agcgtcgcgt ggtgctccgc caaccggcgg tactcagcct tgagagcgtc
     7081 ccggcccgat gcgtcggcga gctgcaggca ttccatagca cgcccaatgc ctcgccgctc
     7141 tcgccacagg atcaggcacg cgaagccccc tcggttcaaa gtgtacaatt ttaggtgggg
     7201 aaatatccgc accaaattga aattccgatt ccgtccggtg gtctcggcac cgggcaacag
     7261 gacatgaacg aattttgccg atctcgagga aaccaattcg cctcgtgcgg catcggcaag
     7321 ctgtggcgca agccagatcg cgacgcggtg cgctactgct tcaaaaatgc cgatgatgct
     7381 gaaaaaatgc cgatgatgct gatgcgttcc aggcggccta ccgcggcgag cgcgtggcat
     7441 tgcctaccaa aaagccgcga gcaccgtcga tcggccggcg caggccttgg aataagcgct
     7501 gggcccgaac caatcaaaaa tcagtgattt gctggtcgcg gtccacaatc agcaccacgt
     7561 caaaatttat acccgccaac ggcccgcaag tgtgaagtgc ttcacagcag gcgcgcgaat
     7621 ggtcacacgc acgcgcggcg ggtcaaaggt gagcggccgt gaacatattt ggactgctta
     7681 tggcagggct gtccgtgctg gcgtggcttg tctgcctcgt cgcgtggtcc atctttgtgt
     7741 accgcctttt cgcttttgtt tggcgcaatt gggccggcac atctagccag tttccggtgc
     7801 cgcggcggtt tgcggatgcc atgtcacttt tggtgagctt ccatcgagga aaggcattta
     7861 aggcgggagt tgtgttcctg atctcttttg caatcggcgt tctacttgtc atcctcggca
     7921 attggttcgg cggttggcag ggctgaccgg ctccactcgt ggcgagacgc tgcgatggaa
     7981 gcgtttgccg acgagtggcg cgcagagccg aactaataag cagaacgact ccgaacaatg
     8041 tacccagcaa cttgccatgc cctcaggcgc cggccggccc gtactctgtt ccagcccatt
     8101 ggcggccgag ctctgcggca ctggccgtca cgcgaccccc ggcctgcgac cgcagccaag
     8161 ccagcgcctc ggcttcattg aagggacggc caggaacagg ctcgaccatt gcggaatgcg
     8221 ctcctcgatt ttggccggag ggactgccac gagaccctcc atcggcgctt cgccgacctt
     8281 gctgcagggc taccaacgac ttggacgccc ggattggcag gcctcggtcg gcaatggttc
     8341 gggacagctc caccggcaag ccaagctccc aaccgacgac agcatgtccg gcctcatgag
     8401 ccgcggtcgc gtatcgcagt tttgtcattg gcggcaggcc ccgtttggat cgtcagcagg
     8461 atcgcaaacg ctagctttcg ggcaaaggaa gccccgctgg cggcctttct tgtgtcaagg
     8521 aagtcgccgg cgctgaatga tgtcaagctg aacgcgtatc agtctttggc ctcgggcttc
     8581 gtcttgctct ccaaccggtc ctcggtgtcg gccatgtcgt tgagcgcttt cccgcgtctt
     8641 cgatgactga ctccatcccg gagggatttc gactgcccgg ctgccttaat ttcgatttcg
     8701 gcttgcttcc ggaggtcgtc tgctttgttc gacatgaggg gtctcctcct ggtcgacccg
     8761 ctagagctta cgctcctgtc gtcgagggcc atagcgcttc cccagctcgt cagccagcgc
     8821 tggttaccgg cgcgttaccg aaagatcccg gggtcgcgct gatcctgccg tctgtttggt
     8881 tgttggttca gtggatagcg gcacgcccta cacctgccgt tgtcccttga ctggccgcca
     8941 gcactcccag gttctccgct ggcggccttt cttgtgcagc caaccccatg ggcgacattc
     9001 acgcccgccg cctcctccac agcccgcggc gcccgatcga tggagcaggc ggtctcttac
     9061 tggcatccct ggcaagcctg acggaactct gcgtcggatc tgtcagcgcg cgctcgagct
     9121 gtgcctcggc gatggtgatg tggtcgtgta ggccggtc
//
LOCUS       DATILV010000623         3419 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_403362, whole genome shotgun sequence.
ACCESSION   DATILV010000623 DATILV010000000
VERSION     DATILV010000623.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3419)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3419)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3419
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_403362"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..189
                     /locus_tag="VLJ17_14655"
     CDS             <1..189
                     /locus_tag="VLJ17_14655"
                     /inference="COORDINATES: protein motif:HMM:NF013430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit alpha"
                     /protein_id="HSV24254.1"
                     /translation="YHASQMYARNITAFLLHLIKDQKLQLNLDDEIVRETLITRGGDV
                     VNARVREFFGMPAPVAQG"
     gene            176..505
                     /locus_tag="VLJ17_14660"
     CDS             176..505
                     /locus_tag="VLJ17_14660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003525462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P) transhydrogenase subunit alpha"
                     /protein_id="HSV24255.1"
                     /translation="MRKVEHFGGQMNGSTLLNGLFIFMLAGFIGFEVIRRVSPLLHTP
                     LMSLTNALDAIAVVGAIVLVGEHKSSLSAILGTIAVVSATSNIVGGFLITDRMLKMFK
                     SSRPAAK"
     gene            502..1902
                     /locus_tag="VLJ17_14665"
     CDS             502..1902
                     /locus_tag="VLJ17_14665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004446456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HSV24256.1"
                     /translation="MMNEFAGNQLIIEIIYLVASALFILSLKWMSSPTTARHGVWAGE
                     LGMLLAIAGTLLHHGIVDYQWIAIALVLGTIIGIPLGRVQMTAVPQRTALSHAFGALC
                     VTLVGTAEFYLRTPDISRFMMGVLSMEVILGSLTFTGSLMAAGKLQEILPQRPLTYKG
                     QNLVNFLLLGLALVIAMYLVLHPEAKQLYPFMLLIALAFGVLLVIPIGGADMPTVISL
                     LNAYAGLSAAAMGFVLNNKLLIVAGALDGSSGLILSVIMSKAMNRSFTNVLFGAFGQV
                     QASAAAGQEAKPVKSATAEEAAAILSAANKVVVVPGYGMAVAQAQHKVRELYDALTKR
                     GVDVRFAIHPVAGRMPGHMNVLLAEADIPYDRLMDMDDINGDFPQTDVALVIGANDVT
                     NPAARTDASSPIYGMPILDVDKAHTVMVIKRGMSPGFAGIDNPLYYLDNNLMLFGDAK
                     AFVGDIVRELTGGGHS"
     gene            1937..2545
                     /locus_tag="VLJ17_14670"
     CDS             1937..2545
                     /locus_tag="VLJ17_14670"
                     /inference="COORDINATES: protein motif:HMM:NF015639.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HSV24257.1"
                     /translation="MPLRLPAGDQKLVQIVDAALADATRRSGSWLACRLGCTQCCIGV
                     FAISQLDAARLRHGLDQLEHKDSKRALRIRERAREAAERLSPAFPGNPATGVLSDDED
                     SESQFEDFANDEPCPVLDPASGMCELYEFRPVTCRAFGPPVRSEESLGVCELCFHGAS
                     DEQIAACEMEVDPDDLESELLNELEDATGVRGRTIIAFALRD"
     gene            complement(2555..>3419)
                     /locus_tag="VLJ17_14675"
     CDS             complement(2555..>3419)
                     /locus_tag="VLJ17_14675"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSV24258.1"
                     /translation="AGDKQIPLSELATIRMLNGPSMIRNEDGLLTGYVFVDLADRAPG
                     DYVSQARDELQKKLQLPAGYTVLWSGQYESAERVRQRLMLVVPVTLGIILFLLYLNTR
                     SMVKTAIITLAVPFSAVGALWMVYLLGYNMSIAVWVGIIALLGIDAETGVFMLLYLDL
                     AYEKAKREHARLTRTQLYEAIVEGAAKRLRPKFMTFATMSIGLIPILWATGAGSQIMK
                     RIAAPMVGGIVTSFLLELLVYPAIYAFWRERELHREADSEVAGGSKSATSYLELGTLK
                     NRGVVPVSTSE"
BASE COUNT          670 a         1048 c          981 g          720 t
ORIGIN      
        1 taccacgcca gccagatgta cgcgcgcaac atcaccgcct ttctgctgca cctgatcaaa
       61 gatcagaaac tgcaactcaa cttggacgac gaaattgtcc gcgaaacgtt gattacccgg
      121 ggcggcgacg tggtgaacgc tcgcgttcgg gagttcttcg ggatgcccgc gccggttgcg
      181 caaggttgag cactttggag gtcagatgaa cggttccact ttgctgaatg gtttgttcat
      241 tttcatgctg gcgggattca tcgggttcga ggtcatccgc cgcgtgtccc cgttgctgca
      301 cacacctctg atgtcgttga cgaatgcgct cgatgcgatc gcggtagtgg gtgccatcgt
      361 gcttgtcggc gagcataaaa gcagtttgtc cgcgatcctc ggtacgatcg ccgtggtctc
      421 cgccaccagc aacatcgtgg gcggattcct gatcaccgac cgcatgctga aaatgtttaa
      481 gtccagccgt ccggcggcga aatgatgaat gaattcgccg gcaatcagct gatcattgaa
      541 attatctacc tggtcgcgag tgcgctgttc attctctcgc tgaagtggat gagttcgccg
      601 accaccgctc gccacggcgt ctgggccggc gaactcggca tgctgttggc catcgctgga
      661 acgcttctcc accacggcat cgtggattat cagtggatcg ccatcgcgct ggtcctgggc
      721 accatcatcg gcatcccgct cggccgcgtg caaatgacgg ccgtgccgca gcggactgcc
      781 ttaagccatg cattcggggc actttgcgtc acacttgtag gtaccgccga gttttatctg
      841 cgcacacctg acatctcgcg cttcatgatg ggcgtgctct cgatggaagt gattctcggc
      901 tccctgactt tcacgggcag cttgatggcc gcaggcaagc ttcaggaaat tcttccccaa
      961 agaccactca cttacaaagg ccagaacctc gtcaatttcc tgctcctcgg cctggcgttg
     1021 gtgattgcca tgtacctcgt gcttcatccc gaggcaaaac aactttatcc cttcatgctg
     1081 ttaatcgcgc tggcgttcgg cgttctgctg gtcattccca tcggtggggc agacatgccc
     1141 accgtcattt cgctcctgaa cgcctacgcc ggcttgtctg cggcggccat gggattcgtg
     1201 ctcaacaaca agctgctcat cgtcgccggt gcattggatg gctcctccgg tctcatcctc
     1261 tcggtcatca tgtcgaaggc gatgaaccgg tcgttcacga acgttttgtt cggcgcattc
     1321 gggcaagtcc aggcatcggc agccgcggga caggaagcga aaccggtcaa aagcgcgacc
     1381 gccgaagaag cggccgctat cctttcggcc gccaacaagg tcgtggtggt tccgggatat
     1441 ggcatggccg tcgcccaggc gcaacacaaa gttcgcgaat tgtatgacgc actcacgaag
     1501 cggggcgtgg acgttcgctt cgccattcac cccgttgctg gacgcatgcc gggacacatg
     1561 aacgtgctcc tcgccgaagc cgacatcccc tacgaccggt tgatggacat ggacgacatc
     1621 aacggcgact tcccgcagac cgacgtcgcg ctcgtcatcg gcgcaaatga cgtcaccaac
     1681 cctgcggccc gtaccgatgc ttcgagcccg atctacggca tgccgatcct cgacgtcgac
     1741 aaggcgcata ccgtgatggt catcaagcgc ggcatgagtc cgggattcgc cggcatcgac
     1801 aatcccctgt actacctcga taacaacctc atgttgttcg gagatgccaa ggcgtttgtg
     1861 ggcgacattg tgcgtgagct gacaggcggc ggacacagct agtgccggcc tgcgctggct
     1921 gcgttatcct ttccagatgc cgctccgttt gcctgctggg gatcagaaac tcgttcagat
     1981 tgtggacgcg gccctagccg atgccacccg gcgaagcggc tcatggctgg cgtgccggct
     2041 gggctgcacg caatgctgta taggcgtgtt cgccatctcg cagctcgacg ctgcgcggct
     2101 acgccacggg cttgatcagt tggagcacaa ggattccaag cgcgccctgc gaatacgcga
     2161 gcgcgcacgc gaagcggccg aacgtctctc gccggcattc ccgggtaacc ctgcaaccgg
     2221 agttctgtcc gacgacgagg attccgaatc ccaattcgaa gacttcgcca atgacgagcc
     2281 ttgtccagta ctcgatcctg cctcaggaat gtgcgagctg tacgagttcc gccccgtaac
     2341 ttgccgcgcc ttcggacctc cggtgcgttc ggaagagagc ctcggtgtgt gcgaattgtg
     2401 ttttcacggc gcgagtgacg agcagattgc tgcgtgtgag atggaagtcg atcctgatga
     2461 tctggagtcg gagctcctca acgaacttga ggacgccacc ggtgtcaggg gtcgcaccat
     2521 catagcgttt gccctgcgcg attgaggttg acgcttactc ggacgtcgat accggcacga
     2581 caccgcgatt cttgagagtg cccagttcga gataggacgt tgcggatttc gatccgccgg
     2641 caacttcgct gtcggcttcg cgatgcagtt cccgctcacg ccagaatgca tagatggccg
     2701 gatagaccag caattccagc aggaacgacg taacaattcc gcccaccatc ggagcggcga
     2761 ttcgcttcat gatctgcgag cctgcacccg tcgcccacag aattgggatc aggccgatgc
     2821 tcatggtggc gaaggtcatg aatttcggcc gcaaccgctt cgccgcaccc tccacgatgg
     2881 cctcgtaaag ctgggtgcga gtgagccggg catgctcgcg cttggccttt tcgtacgcca
     2941 gatcgagata cagcaacata aatacgcccg tctcggcgtc aatccccagc aacgcaatga
     3001 tgccgaccca caccgcgatg ctcatgttgt agccgagcag gtagaccatc cagagcgcgc
     3061 ccacggcgga gaatggcacg gccagcgtga tgatggcggt cttcaccatc gatcgggtgt
     3121 tcagataaag caggaacaaa atgattccca atgtgaccgg caccaccagc atcaagcgct
     3181 gccgcacgcg ctcagcggat tcatattggc cgctccatag aacggtatat ccagcgggca
     3241 gttgcagttt cttctggagc tcgtcgcgag cctgcgacac gtagtctccc ggggcccggt
     3301 ctgccaggtc cacaaacaca tacccggtca gcaatccatc ctcgttgcgg atcatcgaag
     3361 gtccattcag catgcggatg gtcgccaact cggacaaggg aatctgctta tccccggcg
//
LOCUS       DATILV010000624         3197 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3986948, whole genome shotgun sequence.
ACCESSION   DATILV010000624 DATILV010000000
VERSION     DATILV010000624.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3197
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3986948"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            188..1996
                     /locus_tag="VLJ17_14680"
     CDS             188..1996
                     /locus_tag="VLJ17_14680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24259.1"
                     /translation="MKPIHTFLGPLALLGLPFGLVFSEAVAATEWFVSAAALQGGNGS
                     LQAPFNSLAAVQQASGPGDTIFVLPSPIQNAPLDGGIALKPGQRLIGAGPPVVGAAAP
                     VPIKGPGLPVQSAGPLAVAAVTLPQITNTSANNSGDAVTLANGTEVANLVISGTQRGG
                     IYGLNVTGVNVHGNDISMANLACSVGYTVQPQNIGTYIPGSGVFNAGGVPTAWAAILI
                     DATQGTAVVSIANNYVHDGVCNNGIDVRAMGTSQIFAKVVGNGVFRLAQAANKSGVHA
                     VSMQALDTATATGFINNSTSSDLGNANANPEGFFGNTAGSGVLHLTYDHVAAINMIGG
                     SSSNGAEFLASTGNGAQFIAMRDSVFRTNPGDTLQFLNGAPDGQMSITLDNVVVEGTT
                     LRAGLPPFATPPGTNNSASNLGNCLFARQIGGGGRTDLTIRNSAFSGCDRAGVEVLNN
                     SAFFGVGTTASMSVDIDSTTIVGSRYYNLWVTNLTPLAQLGVRVQNSDLSTSMSGVAV
                     AFSQPSPATTGNVAIDLGGDDLGSVGRNCIYGGAIFDLQTTGFNVAAKQNWWGSAAGP
                     APGKVSASAGSTIDASSPLTTVPSTCGPSNALSLAQ"
     gene            complement(2004..2207)
                     /locus_tag="VLJ17_14685"
     CDS             complement(2004..2207)
                     /locus_tag="VLJ17_14685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24260.1"
                     /translation="MLDTDSDIPALDPPDADAVYARYLETCKHLGVEPVPRERAQELI
                     AEWSEVIAASRSAPPITHGQPHV"
     gene            complement(2355..2428)
                     /locus_tag="VLJ17_14690"
     tRNA            complement(2355..2428)
                     /locus_tag="VLJ17_14690"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2392..2394),aa:Ile,seq:cat)
     gene            2547..3074
                     /locus_tag="VLJ17_14695"
     CDS             2547..3074
                     /locus_tag="VLJ17_14695"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSV24261.1"
                     /translation="MTYPAELETVLTLKSGAMLRVRPIRPEDAVMEREFVDGLSEQSR
                     YLRFMQHLPALTPQMLAHFTQIDYDREMALIALDGEAIVAVTRYVADPDRESAEFAIA
                     VADAWQGRGLGYALMQMLIQCAGKRGFKRLTGSVLTINAPMLALATALGFAAEPDPGA
                     PEQFIVTLELGASGT"
BASE COUNT          630 a          987 c          986 g          594 t
ORIGIN      
        1 aacgagcccg gaaccgtcac caattcctgc acgctccgct ggcagcgctc aatgccgccg
       61 gcgacgccga gcgcgcggaa ctggttgatg aaatggcgtc gaatcacagt cgatgttatc
      121 gtttccccca atagacctga atgtgacatc ggtctattag tgagccggcc aacatgagga
      181 ggcagaaatg aaaccgatcc acactttcct tggccctctt gccctccttg gcctgccctt
      241 cggcctggtc tttagcgaag cggtggcggc gaccgaatgg tttgtcagcg ctgccgcctt
      301 gcagggcggc aacggcagcc ttcaggcgcc gtttaacagc ttggctgcgg ttcagcaggc
      361 ctccggccca ggcgacacga tcttcgtcct accatccccg atccagaacg cccccctcga
      421 tggcgggatc gcgctgaagc ccggccagcg gctgatcggt gccgggccac cggtggtcgg
      481 cgccgcagca ccggtaccga taaaaggccc cgggctaccg gtgcaaagcg ccggaccact
      541 ggcggtagcg gcagtgacgc taccgcagat caccaataca agtgcaaaca actccggtga
      601 cgcggtaaca ctcgcaaatg gaaccgaggt cgccaacctc gtcatctccg gcacccagcg
      661 tggagggatc tatggtctga acgtcactgg ggtgaatgtc cacggcaacg atatttctat
      721 ggctaacctc gcatgctccg tcggctatac ggtacagccg caaaatattg ggacatatat
      781 accggggtcc ggcgtattca acgcaggcgg cgtaccaacc gcatgggcgg cgatcctgat
      841 cgacgcaacc caaggtactg cggtcgtctc gatcgcaaac aactacgtcc atgatggggt
      901 gtgcaataac ggcatcgacg tgcgagcgat ggggacctcg cagatcttcg ctaaagttgt
      961 tggcaacggc gttttccggc tggctcaagc tgccaacaag tctggggtgc acgcggtaag
     1021 catgcaagcg cttgatacag caaccgcgac cggcttcata aacaactcca cttcctctga
     1081 cctgggcaac gccaacgcga atcccgaagg cttcttcggg aacacagcgg gatcgggtgt
     1141 ccttcacctg acgtacgacc acgttgcggc cataaacatg atcggcggct cttcttccaa
     1201 tggagcggag ttcctggcga gcactggaaa cggggcgcaa tttatcgcca tgcgtgacag
     1261 cgttttccgg accaacccag gcgatacgct tcaatttctc aacggggcgc cggatgggca
     1321 gatgtcgata acgctcgata acgtcgtagt cgagggcacc acgttgcgcg ccggactccc
     1381 cccgtttgct acgcctcctg gcaccaacaa ctcagcttcg aaccttggaa actgcctatt
     1441 cgcgcgtcag attggtggtg gcggccggac cgacctgacc atacgcaaca gcgcgttcag
     1501 tggttgtgac cgcgccggcg tcgaagtgtt gaataacagc gccttcttcg gcgttgggac
     1561 cacggcgagt atgtcggtag acatcgacag tacgacgatc gtgggtagca ggtactacaa
     1621 cctgtgggtc accaacctca ccccgctcgc gcagttgggg gtgcgggtgc agaacagtga
     1681 tctttctacc agcatgagcg gcgttgcagt ggcattctcg cagccgtcgc cagcaaccac
     1741 cggcaatgta gccatcgacc tcggcggcga cgacctaggc agcgtcggcc gaaactgcat
     1801 ctacggcggc gcgatcttcg acctgcagac caccggcttc aacgtcgccg ccaagcagaa
     1861 ctggtggggg tcggccgccg gcccggcacc tgggaaggtg tccgcaagcg cgggttccac
     1921 catcgacgca agctcgccgc tcaccaccgt gccgagcacg tgcgggccaa gcaacgcact
     1981 ttcgcttgca cagtgaacga gacctacacg tgcggttgac cgtgcgtgat cggcggggct
     2041 gatcggctag ctgcgatcac ctcggaccat tctgcgatta gctcctgcgc gcgctcgcgt
     2101 ggcaccggct cgacgccaag gtgcttgcac gtttcgagat atcgcgcgta taccgcatcc
     2161 gcgtctggcg gatcgagggc cggaatgtcg ctatcggtgt cgagcatggc gcgatgttag
     2221 cgggagccct tgcacaccta gaagcaggcg ccggggacag gctgcgccac cgaaagtggc
     2281 aaacaggtgg cgaacagcgt accgctggtc atgctccgtc ttgcagtttg cactatagct
     2341 tattgtttta tgagtgggcc cggctggact cgaaccagcg accaaaggat tatgagtcct
     2401 ctgctctaac caactgagct acaggccctg aaggcaatag tgggaaatct tgcgtgggcc
     2461 gattatagcc gacgcggttc accgctctgt tcgcggcacc gctgtcgtgc gcggttcgag
     2521 gcgcatgcga aagctacgcg ctcgacatga cttatccggc ggagctcgag acggtgttga
     2581 cgctgaaaag cggcgccatg cttcgagtac ggccgatcag gcccgaggac gctgtgatgg
     2641 agcgagagtt cgtcgacggg ctctccgagc agagccggta cctgcgtttc atgcaacatc
     2701 tgccggccct cactccgcag atgctggcac acttcacgca gatcgactac gaccgtgaga
     2761 tggcgctgat tgcgctcgac ggcgaagcga ttgtcgcggt tacgcgctac gtcgcggacc
     2821 cggatcggga aagcgccgag ttcgcgatcg ccgtggccga cgcctggcag ggtcgcgggt
     2881 tgggatacgc attgatgcag atgctcatcc agtgcgccgg caagcgcgga ttcaagcggt
     2941 tgaccggcag cgtgctgacg atcaacgcgc cgatgctcgc gctcgcgacg gcgctgggct
     3001 tcgccgccga gcccgatccc ggtgctccag agcagttcat cgtgacgctg gagctggggg
     3061 cgtcgggaac ctgagctgcg tggcggtcac tcgagttctg tcggtccgaa attcattcgg
     3121 accaggcgcc agctcccgcg cgcgaataaa ttcgcgccaa cagccgatcg gcggtcactt
     3181 gaactgtggg tccgaat
//
LOCUS       DATILV010000625         8702 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_403858, whole genome shotgun sequence.
ACCESSION   DATILV010000625 DATILV010000000
VERSION     DATILV010000625.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8702)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8702)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8702
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_403858"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            259..1086
                     /locus_tag="VLJ17_14700"
     CDS             259..1086
                     /locus_tag="VLJ17_14700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24262.1"
                     /translation="MTLRDDLRDYMAANGQDTIALGTPEVVIIGEIHGFLASNAAAIR
                     TTSMTRLARELLADQRFRYFGNESFQNAGPVRQAIRDYWLRAVLPPEFDNAAPGADAM
                     DAQEIGRRVMPRRFQPVLDDLRARPRYVLSIGSRMNGAIRDRRLAQHFFEEVADRGIT
                     RHTPGVLLLGAAHAAATPFNMGQTTTRMILERHGYRCTSIRVITDFGAGGRFDDSVFP
                     LASGTPPAIRLGSLTLRSPVSFSTRLTNSPFLRVRDEFSDSGQSIAEQYEFMVLQRG"
     gene            1329..1742
                     /locus_tag="VLJ17_14705"
     CDS             1329..1742
                     /locus_tag="VLJ17_14705"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HSV24263.1"
                     /translation="MRVEALAVAGIAALGAYALPAVAHHSFAMFDAAKSVTLEGAVKE
                     FQWTNPHAWIMLNVANQQGQAEQWAIELNGPSALVRDGWKPKTLTPGMNVSVTIHPLR
                     DGANGGQFLTVTLPDGTKMGRGGIAPPEGGTPPTP"
     gene            2043..3020
                     /locus_tag="VLJ17_14710"
     CDS             2043..3020
                     /locus_tag="VLJ17_14710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24264.1"
                     /translation="MIIARESISAAGVLRWLAGLVLAMQLTPADALAAQCRPRRPLPS
                     VVLQTMGPCDFNVATLSFAGNSVQQAACLVRPVNPWAHLGPPLESLPKVLADRVGRPE
                     VMPDRAALAALINEVGLAPQFADGLASQVSRARDGDPLSPMARYFVIHDTSGPKLGSF
                     PANLNENAKINNLARFHCTDSFELAHAVINRKGGVFFGHDFAVPWRSTKFERALFFGN
                     TLKGLFLHVEMIQPRRRGPGRHANDIAAPSPGFTSAQYGQLALLYTIASVRAGEWLIP
                     AFHAVIDGDLRGGHDDPQNFELAAFAQALEGILDRLAGEREQSPALGQD"
     gene            complement(3119..3424)
                     /gene="minE"
                     /locus_tag="VLJ17_14715"
     CDS             complement(3119..3424)
                     /gene="minE"
                     /locus_tag="VLJ17_14715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012384689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0032955 - regulation of division septum
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="HSV24265.1"
                     /translation="MNRLIARTPVGSAPVARERLQSLLEHDRCLIGHADLLSVLREEI
                     YALVSRHGAIDPNKVHVAVARGNSSSTMMVDIEVPFRACSREPRFVHDGKAKNWFSW"
     gene            complement(3421..4236)
                     /gene="minD"
                     /locus_tag="VLJ17_14720"
     CDS             complement(3421..4236)
                     /gene="minD"
                     /locus_tag="VLJ17_14720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003506498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HSV24266.1"
                     /translation="MGKVIVVTSGKGGVGKTTSTAALGAALARGEQTVVVVDFDVGLR
                     NLDLVMGAERRVVFDLTNVVQGTAKLTQALVRDKRLETLYLLPASQTRDKDALTEDGV
                     AMVISELRDRFDWVICDSPAGIERGATLAMRFADEAVIVANPEISSVRDSSRIAGLVD
                     SKPLKAEAGGRLAKHLLITRYDPQRVARREMLSVEDVRAILPIPLLGIIPESEEVLRA
                     SNLGAPITVCGRESSVSRAYFDAARRIKGEWIKIKIPSDNKSLLTKLLGRRAA"
     gene            5188..5520
                     /locus_tag="VLJ17_14725"
     CDS             5188..5520
                     /locus_tag="VLJ17_14725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24267.1"
                     /translation="MTKQLEAERVVKASQQMGKDAPPPAAPSKKMSPVKMKIASVQYA
                     GAIATPKGDIPSWRITFNLDAEHLLATSLTVQATGANDVLEARESGLNILRRFAQDLL
                     DAAIVFHA"
     gene            5544..6041
                     /locus_tag="VLJ17_14730"
     CDS             5544..6041
                     /locus_tag="VLJ17_14730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24268.1"
                     /translation="MASEADMRDEVELAARALDGMVTAQLAAGRNRCVLAAACVWGGV
                     KEMSEVTSSKSAAAALRTIANQIDPSADVARAKNAARSDETLMVAVREHGWDGRASKQ
                     KASDDLTPGTFNQAIASDVVGEAIDLLDQGQPVLARALLMALRARIASSPRPPATVAK
                     RRWGP"
     gene            6206..7045
                     /locus_tag="VLJ17_14735"
     CDS             6206..7045
                     /locus_tag="VLJ17_14735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24269.1"
                     /translation="MNERISFGTMALAGALVLSIAGAAAHDESKYPDWKGQWRRASGT
                     GINWDETKPRLKQEAPLIPEYQAIWEASVADQAAGGQGGDTRVRCISNGMPRLMTIVR
                     PLAFFIQPDITLVVYDNNIPRWIYTDGREMPKDAEPSYAGYSIGKWLDTDGDGRFDML
                     EVETKNFKGPRIYDDSGIPLHYDNESVIKERLSLDKSNPNILLNEITTYDHALTRPWT
                     VIKHYHRVAGRIEFHEDLCSENNMHVYVGKEGYFVSGVGYLMPTKKNQAPPDLRYFRQ
                     TQK"
     gene            7127..7936
                     /locus_tag="VLJ17_14740"
     CDS             7127..7936
                     /locus_tag="VLJ17_14740"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HSV24270.1"
                     /translation="MDQRNFTSDYDTLLELVKTRVSVRNLKPDPIPDDYVNKILEVGR
                     WAMSGANGQPWDFVIVKDAAIKKELFRVYTEENNDFIYWMEQQRDFSLRHPSFQMTHD
                     EALQKHRTSVGWSIAPVLIVILGDGRRQWATVQGAHTFGRDQSHLTDGLANTAMMMHL
                     AAGALGLGSQHVTIHIQEPFKRVLGVPDLITFSLIMPIGYPAVPPKEGVRRPLEDMVH
                     HDKFDISKYMTNEQILHYLRGLREKTVPVYSHSYAGRPPSPLPKGERDGER"
     gene            8039..8266
                     /locus_tag="VLJ17_14745"
     CDS             8039..8266
                     /locus_tag="VLJ17_14745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24271.1"
                     /translation="MSSDECNMTISGGLVAATARHCRRHVGGVLCGFLLCCVATKPRA
                     VHIFGAMERAKENDQDLKQALGRVRARLCAS"
     gene            8301..>8702
                     /locus_tag="VLJ17_14750"
     CDS             8301..>8702
                     /locus_tag="VLJ17_14750"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV24272.1"
                     /translation="MYIARQRGLVAGLAASFLLHLATPSLALDTIRLGKAVPNSFAFG
                     ATEVGIDAKIFENEGLDVAVSSFRGDAQLQQALAAGSVDVGLGSGPGLGFRVKGAPMI
                     GVAAMYGAPRNLALLVPAKSAVKSVADLKGKR"
BASE COUNT         1795 a         2615 c         2546 g         1746 t
ORIGIN      
        1 cgcgctcatt cgcgaacccc gaaagcttcg cgtcgttgcg tcatgctagt gtgccggttc
       61 taaccgtcaa tcctattcta cattctgggc tttgcgagac ttgtccgctg ctgggggaca
      121 agccgtcgaa aacgcgctcg aagtcgctcg tgcattgtta cgcataactt gtcccgccgt
      181 ggtgaaccct gccgcgtacg aagacgacca acgagcgtaa tccagtgcga ctagcccgtg
      241 gcacaaaacg aggcaagcat gacgctgcgc gacgatctcc gggactatat ggcggcaaat
      301 gggcaggaca cgatcgcgct cggaacgccc gaggtggtca ttatcgggga aattcacggc
      361 ttcctggcct cgaatgccgc cgcgatccgc acaactagca tgacgcgcct tgcgcgcgaa
      421 ctgctggccg atcagcgctt ccggtatttc ggcaacgaat cctttcagaa tgcgggcccg
      481 gtaagacaag ccattcgcga ctattggcta cgcgccgtac tgccgccgga gttcgataac
      541 gcggctcccg gcgccgacgc catggatgcg caggagatcg gccgtcgcgt gatgccgcgc
      601 cggttccaac ctgtgctcga cgacctccga gctcggccgc gctacgtgct ctcgatcggg
      661 tcgcgcatga acggagccat ccgcgatcgc cgcttagcgc agcacttctt cgaagaggtc
      721 gcggaccgcg gcataacccg ccatacacct ggcgtgcttc tgctcggcgc cgctcatgcg
      781 gcagcgacac ctttcaacat gggacagacg acgacgcgaa tgatccttga gcggcacggc
      841 taccgctgca cgtcaatccg cgtcatcacc gacttcggcg ccggcggcag gttcgacgac
      901 tcggtttttc cgttggccag cggaacgccg ccggcaatac ggctggggag tctcactctt
      961 cggtcccccg tcagctttag cacccgcctc accaacagcc ccttcttgcg tgtgcgagac
     1021 gaatttagcg acagtggcca gtcgatcgcc gaacagtacg aattcatggt gttgcagcga
     1081 gggtgaggct ttcttggctg gcacatctac ccggctggat ttgatctcgc cttcagcttt
     1141 tagttttgcg cgtcgaccta agggcatgac ggttacgaga aacaagcgtt ggcgagcgtc
     1201 cacttgtttg ggcgtcaaat aacggccggt ttgtctcgtt tgtctcgtcc tgcttggcgt
     1261 tgacgttcgc caccccttct cttactcttt ggttaagctc ccagagagag agagttgagg
     1321 aggcgccgat gagagtcgaa gcacttgccg tcgcgggcat tgcggcctta ggggcgtatg
     1381 cgctccccgc cgttgcccat cattcctttg cgatgtttga tgctgccaag agcgtaaccc
     1441 tggagggtgc ggtcaaggaa ttccagtgga ccaaccccca cgcctggatc atgctcaacg
     1501 ttgccaatca gcaaggccaa gccgaacaat gggcgatcga gctcaacgga ccaagcgcct
     1561 tggtgcggga cggctggaaa ccgaagacgc tgacgcccgg catgaacgta tcagtaacta
     1621 ttcatccgtt gcgcgacggc gccaatggcg gccaatttct gaccgtcacg ttgccggatg
     1681 gaaccaagat gggccgcgga ggtattgcgc cgccggaggg cgggacgcca ccgacaccgt
     1741 agggcccgcc ggattctcaa aagggcgcgc cctcgcttcg ccacgcccga agggtggcgt
     1801 cgtgaggggc ggtattggga aatcaaattg gggccatcgc tttcagcggt ggcccttact
     1861 atgagacgac gggcggtgtt cgaattcatt ttgacgatgg ttttaccttc gccagctata
     1921 ttcacaatgc gggccgcagc tcgccaaact catttccggt tatggtcaat atataggttc
     1981 aacgtgttca cctcggggcg gttgtaaacc atcaaagatc tcgatccggt gtgtgggggg
     2041 cgatgatcat tgcgcgcgag tcaatcagcg ccgcgggcgt cttgcggtgg cttgccggtt
     2101 tggtgctggc aatgcagctg acgccggccg acgctctggc ggcccagtgc cgaccgcgtc
     2161 ggccgcttcc atctgtggtg ctgcaaacca tggggccgtg cgacttcaat gtcgcgaccc
     2221 tgagctttgc cggcaattcc gttcagcagg ccgcgtgctt ggtccgcccc gtcaacccct
     2281 gggcgcatct tggtcctcca ctggaaagtc ttcccaaggt gctggccgac cgcgtcggcc
     2341 gtccggaggt catgccggac cgcgcagcgc tggcggccct aatcaatgaa gtcggacttg
     2401 cgccacaatt tgccgacggc ctcgctagcc aagtctcgcg ggcgcgcgac ggcgatccac
     2461 tctcgccaat ggcgcgctat ttcgtgatcc acgacaccag cgggccaaaa ctcggctcgt
     2521 tcccagcgaa cctcaatgaa aatgccaaga tcaacaactt ggcgcggttc cactgcacgg
     2581 attccttcga gcttgcccat gccgtcatca accgcaaggg aggtgtgttc ttcggccatg
     2641 atttcgcagt gccatggcgc tccaccaagt tcgaacgggc gctgtttttc ggcaacaccc
     2701 tcaagggatt gtttctccac gtcgaaatga tccagccgcg ccgtcgcggg cccggacgcc
     2761 atgccaacga tatcgcagcg cctagtccgg gctttaccag cgcgcaatat gggcaattgg
     2821 cattgctcta tacgatcgca agcgttcgcg ccggtgagtg gctcattccg gccttccacg
     2881 ctgtgattga tggcgacctt cgcggcggcc acgacgatcc gcagaatttc gagcttgcgg
     2941 catttgccca ggcgctcgaa ggcatccttg atcggttggc gggcgagcgt gagcaaagcc
     3001 cggccctcgg gcaggattag ctcgccggac gcaaggccct ccagacgcaa gcgtatgccg
     3061 acgtcaggca acgtcctgta ttgatcccgc ggctcagcgc cttcgggcag ctgtcagatt
     3121 accacgagaa ccagttcttc gccttgccgt catgcacaaa acgcggctcc cgcgagcagg
     3181 cgcggaacgg aacctcgata tcgaccatca tcgtcgaaga agagttgccg cgggccaccg
     3241 cgacgtgaac cttgtttggg tcaatcgcgc catgcctgct gaccaaggca taaatctcct
     3301 cgcgcagaac cgataggagg tccgcgtgac cgatcaggca gcgatcgtgt tcaagcaggc
     3361 tctgcagccg ctctcgcgcc accggtgccg aaccgaccgg cgttcgcgca atcaggcggt
     3421 tcatgcggcc ctccgtccga gcaacttcgt aagtagactc ttattgtcgc tcgggatctt
     3481 tatcttgatc cattcacctt tgatacgacg agcggcgtcg aaataggcgc gagatacgct
     3541 gctttcgcgg ccgcagaccg tgatcggcgc accgagattg gaggcgcgca acacctcctc
     3601 gctctccggt ataatgccca gcagaggaat cggcagaatt gcgcgcacat cctcgacgct
     3661 gagcatttca cggcgcgcca cccgttgcgg atcataccgg gtgatcagga ggtgcttggc
     3721 gagccgcccc cccgcctccg ctttcagggg cttggaatcc accaaaccag cgatgcggct
     3781 ggaatcccga accgaggaga tttccggatt ggcgacgatg acggcttcgt ctgcaaatcg
     3841 catggccagg gtcgctccgc gttcgatacc ggctggactg tcgcaaatca cccaatcgaa
     3901 cctatcgcgc aattcggaaa tcaccatggc aacgccgtcc tcggtgagtg catccttatc
     3961 gcgggtctgt gaggcaggaa gcaagtagag cgtctccaag cgcttgtcgc gcactaacgc
     4021 ctgggtcaac ttcgccgtgc cctgcaccac attggtcagg tcgaacacca cgcgtcgctc
     4081 agcacccatc acgagatcga gattgcgcag gccgacatca aaatcgacaa caacgaccgt
     4141 ttgttctccg cgtgctaacg cagcgcccaa agccgcggtt gacgtggtct tgccgacacc
     4201 ccccttgcct gaggtcacca caataacctt acccatctta tcccactccc actgattcgc
     4261 tcgacttcgt agcgtcgcca cgacaacggc ttcagaatgg cggtaatgcg gcagcttcga
     4321 gtcatacgtc cacagcctcc tcttgtaagg cctgtttcga aaacatttgt attggcaact
     4381 acctccgcga tagttgggcg tcatcgagac cgattgcatc gccgccaaaa tgccaaaatg
     4441 cgaacgctgg cattattcag cgcgtgttta attggtaatt ttgcggtttt tcatctggat
     4501 gcccgcccgg ctggtacttt ttcgcaacga aaccaatgtc gtcaccgacg ttcgccacca
     4561 cgtaaaacta aggcgagaaa ctttattttg tcgctatttc ccgtcagcca aattatttgg
     4621 ctgacaaaaa ttctagtcca agacgattaa atcaattcaa tgcaaccctt tggattatcg
     4681 ggctattgaa ttaattactc tttttataac gctgcgctgc gatatcaaaa gatgttgtgc
     4741 ttcattgaac tgccgcaaag cgccctttgt gcggtcacaa tcgaaacgag aatatccaaa
     4801 tatggccgaa tcgtagggtg gtcccacgac gcgtgcgcat gtcgcgggcc ctcaagggga
     4861 cgatgaaggt caatggagac tgcgcagctc gtacggcctg ttgccgacgt tgctgggggg
     4921 caggcgaatg aaggctcgct cgcaggtcgg gcgagtttcg tttgtgtagt tgtaccgtac
     4981 gtgagttggc cattcggacg gcaaatggcc attggctgcc ctggtccggc ccccctccgc
     5041 gcagcagtgg tgagtttccg tcagatttcc gcgattttca gatcgcggaa atcttgtggc
     5101 taggttgaaa tttccgcttt ccggacggcg tgttgttgga cttttagcgt aggtgtcagg
     5161 gtagtcaagg gcaatcgcgg aacgtacatg acaaaacaac ttgaagccga gcgtgtcgta
     5221 aaagcgtcgc aacaaatggg gaaggatgcg ccgccaccgg ccgcaccctc aaagaaaatg
     5281 tcacctgtca aaatgaaaat tgcgtcagtg caatatgctg gcgcaatcgc cacgccgaaa
     5341 ggcgatattc cgtcgtggag aattacattt aatttggatg ccgaacatct actggcgacc
     5401 tcccttaccg tgcaggcgac cggcgccaac gatgttcttg aggcccgaga gtcgggcttg
     5461 aatattctgc gacggtttgc gcaggacctt ctcgacgccg caattgtgtt tcatgcgtga
     5521 cgtttggcga cggaatatca gacttggcta gcgaagcgga catgcgcgac gaagtcgagc
     5581 tggctgcgcg tgcgctcgat ggcatggtta cggcgcaatt ggcggccgga agaaatcgat
     5641 gcgtgctggc tgccgcctgt gtctggggcg gtgtcaagga aatgagcgaa gtcacgagct
     5701 ccaaatccgc cgccgcggcg ctacgaacca tcgccaacca gatcgacccc tcggctgacg
     5761 tggcgcgagc gaaaaatgcc gctcgatccg atgagaccct tatggtggcg gtgcgagagc
     5821 acgggtggga tgggcgcgcg tcgaagcaaa aggcatcgga cgacttgacg ccgggcactt
     5881 ttaaccaggc aattgcaagc gacgtggttg gggaagccat tgacctcttg gatcaagggc
     5941 aaccggtgct ggcgcgcgca ttgcttatgg cgctccgtgc cagaattgcc agcagcccgc
     6001 ggccgcccgc aacggttgcg aagcgccggt gggggcctta atgccacaac gtcggcgcgg
     6061 tttttaagac cccataagag accagcgcgc cctcgatcga gacatacaaa ttccgcgccc
     6121 ttccgcagcc gcgcacgatc ggtgtatcct tgtcgagccg tctctccggt cggaggggtg
     6181 cgcgtttcga tcaagggagc agcgcatgaa tgagcgaatc tccttcggta ccatggccct
     6241 ggcaggcgcg ctggtactgt caatcgcggg cgccgcggcg cacgacgaat ccaaatatcc
     6301 ggattggaag ggccaatggc ggcgggcgtc tggaacgggg atcaactggg acgagaccaa
     6361 gccgcgcctc aagcaggagg cgccactcat tcccgaatat caggccattt gggaggcaag
     6421 cgttgccgat caggccgccg gtgggcaggg cggggatacg cgggtgcgtt gcatcagcaa
     6481 cggcatgccg cggctcatga ccatcgtgcg gccactggcg tttttcattc agcctgacat
     6541 cacgctggtg gtttatgaca acaacattcc acgctggatc tataccgacg gtcgcgaaat
     6601 gcccaaagat gccgagcctt cctatgcggg ctactcgatc ggcaaatggc tggataccga
     6661 cggcgacgga cgcttcgata tgctcgaggt cgaaaccaaa aatttcaaag gcccgcgtat
     6721 ctacgacgac agcggcattc cgttgcacta cgacaacgag tccgtgatca aagaaagatt
     6781 gtccctcgac aagtcgaacc caaacattct tctcaatgag atcaccacct atgaccacgc
     6841 attgacgcgg ccgtggacgg tgatcaagca ctatcaccgg gtggccggga ggatcgagtt
     6901 ccacgaagac ctgtgctcag aaaacaatat gcacgtctac gtcggcaagg aaggctattt
     6961 tgtcagcggc gtcggctatc taatgccgac caagaagaac caggcgccgc cagatctgcg
     7021 ctatttcagg cagacgcaga agtgaaaact ccctcgcggt cttcggggag gagaagcaag
     7081 gcaaagcgcg caagcggaat tgcaacgcaa gcatcggaaa accaccatgg accagcgcaa
     7141 cttcacgagc gactacgata cgctgctgga actcgtcaaa acccgcgtga gcgtgcgcaa
     7201 cctcaagccc gatccaatcc cggacgatta cgtcaataaa atcctcgaag ttggacgttg
     7261 ggcgatgtcc ggcgccaatg gccagccgtg ggatttcgtc atcgtcaaag acgctgccat
     7321 caagaaggag ctgttccggg tctacaccga ggagaacaac gacttcatct actggatgga
     7381 gcaacagcgc gacttcagcc tgcgccatcc ttcattccag atgacccacg acgaggcctt
     7441 gcaaaagcat cgcaccagcg tgggctggtc gatcgcgcca gtgttgatcg tgatcctggg
     7501 cgacggtcgc cgccaatggg caaccgtgca gggcgctcac accttcgggc gcgatcagtc
     7561 gcacctgacc gatggattag ccaacaccgc catgatgatg catctcgcgg ccggagcact
     7621 cgggctcggc agtcagcacg tcaccatcca catccaagag ccgttcaagc gcgtgctcgg
     7681 cgtgccggac ctcatcactt tctcgctgat catgccgatc ggctatccgg cggtgccgcc
     7741 taaggaaggt gtgcgtcggc cgctggaaga catggtccac cacgataagt tcgatatctc
     7801 caaatacatg accaatgagc agattttgca ttatctgcgc gggctgcgcg aaaagaccgt
     7861 gccggtctac agccactcat acgcgggccg cccgccttca cctctcccga aaggagagcg
     7921 cgacggcgag cgctagccag gtgagggact gtgcagagtg cgagcccccc cctcacattt
     7981 ctcgtggcgc tccaggagga caggtcaagc cgcggcggcg agaaacgtat acccatcaat
     8041 gtcgagcgat gaatgcaaca tgacgatttc tggcggcctc gtcgcggcca cggcgcgcca
     8101 ttgccgccgc catgttggtg gcgttctttg cggtttcctg ctttgctgtg tggctacaaa
     8161 gcctcgagct gtgcatattt tcggcgccat ggagcgtgct aaagaaaatg atcaggacct
     8221 taagcaggca cttggccgag ttcgtgcgcg gctgtgtgcc agttgataat tgaaatcctc
     8281 aaatatgagc agcgaagcta atgtacattg cgcgtcagcg ggggctagtt gccggactgg
     8341 cagcgagctt cctccttcat ctcgccaccc catccctcgc cctcgatacc atccggctcg
     8401 gcaaggcggt gcccaactcg ttcgccttcg gggcgactga agtcggcatc gacgcgaaaa
     8461 tctttgaaaa cgaagggctc gatgtcgccg tatcgagctt ccgtggcgac gcacagcttc
     8521 agcaggcgct cgccgccggc agcgttgatg tcggcctcgg gtccgggccg gggctcggtt
     8581 tccgggtcaa gggtgcgccg atgatcggcg tcgccgcaat gtacggcgcg ccgcgaaatc
     8641 tagcgctgct agtgccggca aaatcggccg tcaagagcgt cgccgacctc aagggcaaac
     8701 gc
//
LOCUS       DATILV010000626         6239 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4750622, whole genome shotgun sequence.
ACCESSION   DATILV010000626 DATILV010000000
VERSION     DATILV010000626.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6239)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6239)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6239
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4750622"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            183..1595
                     /locus_tag="VLJ17_14755"
     CDS             183..1595
                     /locus_tag="VLJ17_14755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007595059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV24273.1"
                     /translation="MPHEEHRDIAAERPPKASRSNLATSLTLVAMSLGYGVVQLDVTV
                     VNTALSTIGASLGGGVSELQWVVSTYTIAFAALIMTAGALGDRFGAKRVFVAGFAIFT
                     CASLVCALAPTAAILVAGRAIQGIGAAALVPNSLALLNHTYPGETERGRAVGIWAAGA
                     SLALTAGPLAGGALIAIVGWRSIFLVNLPIGLVGLWLTWRYAEEVPRSQTRELDVPGQ
                     MAAIAALGVLAGALIEGGRAGWGNPGILAAIVMSAVLATLFVLQERRTAQPMLPLALF
                     RHHRFTLASLVGLLVNIAFYGLIFVLSLYFQQINDLSPLATGLAFVPMMGVVLPLNLL
                     APRAAEVFGAPVVVAAGAALAAAGCVALLGIGPGTRYWAVCAQLVAIGGGLGLLVPPL
                     TSMLLGSVEKARSGIAAGVFNSTRQTGSVLGVALFGSLIGRSGAFMTGARESLVISAA
                     LLLGASVAMAFSQTERSHND"
     gene            1607..1741
                     /locus_tag="VLJ17_14760"
     CDS             1607..1741
                     /locus_tag="VLJ17_14760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24274.1"
                     /translation="MRDLDAAAFYGLGERAAYLGERPVNIGYGVRLRLDSRGEIRVPF
                     "
     gene            2031..2240
                     /locus_tag="VLJ17_14765"
     CDS             2031..2240
                     /locus_tag="VLJ17_14765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009762606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HSV24275.1"
                     /translation="MNTGTVKFYSDQRGFGFIQPDNGEKDVFVHATALERAGINNLRE
                     GQKVRFDTRSDPRNGKVAVGTLEIA"
     gene            complement(2858..3460)
                     /locus_tag="VLJ17_14770"
     CDS             complement(2858..3460)
                     /locus_tag="VLJ17_14770"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HSV24276.1"
                     /translation="MKKSLHAAEQDRPDVAAARKALRREQPTLDPKQLVFIDETAATT
                     KMTRLYGRAPQGKRLVDEVPHGHWKTTTFICGLRYDGVTAPFVLDGPMDGPHFLAYVE
                     QILAPTLKKGQIVFLDNVSTHKVDGVEEAIEARGARFIFLPAYSPDLNPIERLFARLK
                     SFLRKTKARTVEELWRAIASFLKGVSKDECKAYLANSGYT"
     gene            complement(3402..3794)
                     /locus_tag="VLJ17_14775"
     CDS             complement(3402..3794)
                     /locus_tag="VLJ17_14775"
                     /inference="COORDINATES: protein motif:HMM:NF013842.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSV24277.1"
                     /translation="MGKPYSDDLRERVVAAIESGHTRVEVAELYNMALSTVGGFIKRK
                     RETGSVSPDKFGGYKTFTLEPHADRVKKLVAEQPDSTLAELQVRLAKEKVKVSQSGIS
                     RFLHHINLTYKKKPTRSRTRSTRRRCGP"
     gene            3922..4671
                     /locus_tag="VLJ17_14780"
     CDS             3922..4671
                     /locus_tag="VLJ17_14780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSV24278.1"
                     /translation="MPTIFDFRDRVAVVTGGAQGIGRAIAARLLNGGATVWLWDRDIA
                     LAKATAAELGSMGPAFAAPVDVTDLGAIEAVARTIDGGRIDILINNAGISGPNAPTWE
                     YPPQDWARVLAVNLTGTFNCCKTLAPMMIVRNYGRIVNIASIAGKEGNPNACAYSASK
                     AGVIALTKSLGKELAGYDIAVNCVTPVVAKTAIFDQMTKEHIAYMLSKIPRGRFVMVE
                     EIADLVAFCASPECAFTTGAVFDISGGRATY"
     gene            complement(4679..6025)
                     /locus_tag="VLJ17_14785"
     CDS             complement(4679..6025)
                     /locus_tag="VLJ17_14785"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSV24279.1"
                     /translation="MSDATKKRRLTKLVIAMPILAALGVGMAGPSGHGQGSAEKLAID
                     VVNDVVNHRLAAVVARFTPDVAQGLSLPALEKMWEGVLLQGGAVREIAPARVDRVIAG
                     GTVVIVPVWLEHAMLELKISVANDKVAGFFITQPWSAPDYVDRAKFTDLAVTVGPMAL
                     GGTLSLPEMTAKETADRVPAVVLIHGSGPHDRDATIGPNRPFRDIAEGLASRGIAALR
                     YEKRTKAHPERFAGTFTVWEESIEDVIAAVALLAGRQEIDAKKIVIVGHSLGGMLAPR
                     IAAGRNDIAGVIIMAGPTRPIPLIMVVQAEYLANLDGPADETIKKVVEETKAEATRAM
                     MAKPGNVGPNILRAPARYWADLNAYDPAATAAKLSLPLLILQGERDYQVTADDLKRFK
                     TALAGRRNVTIREFPPLNHLFMPGEGKIRPEEYLKPGHVDPSVIETLVGFMSSLPK"
BASE COUNT         1169 a         1838 c         1891 g         1341 t
ORIGIN      
        1 cagctcaagc gcgtgccgac agcaaagcgc cactactaca gagataaaat gggcctgcgc
       61 gcgcaggcgg atacttcggt ctgtaccgaa gtattgtcca tttgttccgc ggcgcgatta
      121 ccccacataa gggcctatcg accgtagggc cgccgatgat cagcacagca aggaagacac
      181 aattgcccca cgaagagcac cgcgatattg cggcggaacg gccgcctaaa gcctcccgat
      241 cgaaccttgc gacatcattg acgcttgtgg caatgagtct cggttacggc gtcgtacagc
      301 tcgacgtcac tgtcgtaaat acggcgctga gcacgatcgg tgcctcgctg ggaggtggtg
      361 tctctgaact ccaatgggtg gtcagcacct ataccatcgc attcgctgcc ttaatcatga
      421 ctgccggagc gctgggcgac cggttcggcg caaagagagt gttcgtagcc ggcttcgcga
      481 tctttacgtg cgcgtcgctg gtgtgcgcgt tggcgccgac ggcagccatc ttagttgcgg
      541 gcagagccat tcaggggatc ggcgcggccg cgctggttcc gaactcgctc gcgctcctca
      601 accataccta tccgggcgaa accgaaaggg ggcgagcagt ggggatctgg gcggcgggag
      661 ctagccttgc actcaccgca ggtccgcttg ctggcggggc gctaatcgcg attgtcggct
      721 ggcggagcat tttcttagtc aatctgccaa tcggtctggt tggtctatgg ctgacatggc
      781 gttacgcgga ggaagtcccg cgatcccaga ctcgcgagct cgatgtgcct gggcaaatgg
      841 cagccatcgc cgcactgggg gtcttggctg gagcgctcat cgagggcggc agagctggct
      901 ggggcaatcc gggaatcttg gcagcaatcg ttatgtcggc agtcttggca acgctgttcg
      961 tgctccagga acggcgcacc gcgcagccca tgctcccgct tgcattattc cggcatcacc
     1021 gcttcaccct ggcatcgctc gttggtcttt tggtgaatat tgccttctat ggcctcatat
     1081 tcgtgctcag cctctatttt cagcagataa acgatctttc gccgctcgcg accgggctgg
     1141 cgttcgttcc gatgatgggc gtcgtgcttc cgctcaatct tttggcgcct cgcgcagccg
     1201 aggtctttgg cgctccggta gtcgtcgctg ccggtgccgc gctagcggcc gcgggttgcg
     1261 ttgccttgct cggcatcggg ccgggcacgc gctattgggc ggtatgcgca cagctggtcg
     1321 ctattggagg aggtcttggt ctgctggttc caccgctcac ctcgatgttg ctcggcagcg
     1381 tcgagaaggc gcgttcggga attgcggccg gcgtcttcaa ctccacccga caaaccggca
     1441 gcgtgctcgg ggtcgcgctg ttcggctcac tcatcggtcg gtccggcgca ttcatgaccg
     1501 gagcccggga gtcgttggta atctcggcgg cacttttgct gggggcatct gttgcgatgg
     1561 cgttcagcca aacggaacgg tctcacaacg actagtccag acgggggtgc gcgacctcga
     1621 tgcggccgca ttttatggtc tcggcgaacg cgccgcttat ctgggcgagc ggcctgtcaa
     1681 catcggctac ggcgtgcgtt tgcgccttga ttcgcgcggc gagatccgag ttcccttttg
     1741 agcctgtcgt cataccagcg gcgcgaggcg ttgtattgcg gattgtgacg aaccggaagc
     1801 gcatgggaac cgccgccgaa tgttccgccg ccaattgctg ccggttgctt gtacgggctt
     1861 agcattgggc ctatatgttg cggatcgaga ttggccggac aactgggccg catcgcggcg
     1921 tcactgacga gcgcgcacgt ttcagacttc ttaccaaatt cgatagtcgc gggtgtgcgc
     1981 acggaaagcg gtgcgtcgat cctgcacacc gtcagtgaaa ggtcaaatca atgaatacgg
     2041 gtacagtgaa attctacagt gaccaaagag gctttggctt catccagccg gacaacggcg
     2101 agaaggatgt ctttgtccat gccaccgcgt tggagcgagc cggcatcaac aacctgcggg
     2161 aggggcagaa ggtgcggttc gatacgcgaa gtgatccgcg caacggcaaa gtcgcggtcg
     2221 gcacccttga aatcgcctga caaactcgac gactgcatca gcagatagtg gccccggaca
     2281 ggcaggcttt cgttgaggag cgaggctgcc gatctgtcgc ctcaggaccg atccgagcta
     2341 acataatcgg tcaattgaac accgggagac ttggccggtc cgccttccgt tgagccgttt
     2401 ttgcatgcac agcgatcgat caaggcgcgc ggatatacct agggaagcca ttctgcttga
     2461 acctctatgg gcgtcacatg gctgaaaagc gcaccgattt ggagatgtcc ccgctgtacc
     2521 tcactcttgc aaacgagtgc ttcaacaaag cttcgattga agagcacgcc ggcggcgccg
     2581 aagtctttag gcgaatgggt cgctgttacc tttccgaagc ggcggcttta gacgcaacgc
     2641 ttggccagaa gatggcttcc acaaatgtgg cgtcgtcatc ctcaaagccg cgtcgctgag
     2701 ggctacgcct gaaggcggag tcggggccac gaatgtgtcg cccgtccggt gagagccacg
     2761 cgcgatgccc cgcacaatgt gcaggccggg acatggcgtg atcgcgggac tggtagcgtg
     2821 ctggtattca tcaacgctag agcatttctc gattaggtca ggtgtagccc gagtttgcga
     2881 gataagcttt gcattcgtct ttggaaaccc ctttgagaaa agaggcgatt gctctccaaa
     2941 gctcctcaac agtgcgcgcc ttcgttttgc gtaagaacga tttgagcctt gcgaagagtc
     3001 gttcgatggg attgaggtcc gggctgtaag ccggcaggaa aatgaagcgt gcgccgcgcg
     3061 cctcgattgc ttcttcgacc ccgtcgacct tatgagtgga aacattgtcc agaaagacga
     3121 tctgtccctt cttcaatgtt ggagcaagga tctgttcgac ataggccagg aagtggggtc
     3181 cgtccatcgg gccatccagc acaaacgggg ccgtgacgcc atcatagcgc agcccgcata
     3241 tgaaagtcgt tgttttccag tggccgtgcg gcacctcatc aacgagccgt ttgccttgcg
     3301 gagccctgcc atagaggcgg gtcatcttgg tggtggcggc ggtttcatcg atgaagacaa
     3361 gttgcttcgg atcaagggtc ggctgttctc tccgcaatgc cttacgggcc gcagcgacgt
     3421 cgggtcgatc ttgttcggct gcgtgtaggc ttttttttat aggtcaggtt gatgtggtgg
     3481 agaaaccggg aaatccccga ttggctcacc tttacctttt ctttcgccaa gcgaacttga
     3541 agctctgcaa gcgtactatc cggttgttcc gctacaagtt tcttaacccg atctgcatgt
     3601 ggctcaagcg tgaaagtctt gtacccgccg aatttgtctg gactgacact gcccgtttcg
     3661 cgcttacgct tgatgaatcc cccaacagta cttaaagcca tattgtacaa ctcggcaact
     3721 tccacacggg tatgaccgga ttcgattgcc gcaacgacac gttcgcgcaa atcgtcggaa
     3781 taaggcttcc ccattcatga ctggccccct ttgcaccagt ggggatcttg aatccgattc
     3841 gcgccgtcgt gggaatccac aatcagcgat tcaacctttt cgtcaaatgc tctagttccc
     3901 ttgtaatgcg cgaggccctt gatgccgacg atcttcgatt tccgcgaccg cgttgccgtc
     3961 gtcaccggcg gtgcccaagg catcggccgg gcgattgcgg cacgcctgct caatggcggc
     4021 gctacagtgt ggctgtggga ccgcgatatc gcactcgcaa aggccaccgc cgcggaactc
     4081 gggtccatgg gcccggcctt cgcggcaccg gtggacgtga ccgacctcgg agcgatcgaa
     4141 gccgtggcca ggacgatcga cgggggccga atcgacatcc tgatcaacaa cgcgggaatt
     4201 tccggcccca atgctccgac ttgggagtat cccccgcagg actgggcgcg ggtgctcgcc
     4261 gtgaacctta ccggcacctt caactgctgt aagaccttgg ccccgatgat gatcgtgcga
     4321 aactacggcc gcatcgtcaa catcgcctcg atcgccggca aggagggcaa ccccaacgcc
     4381 tgcgcctatt cggcctccaa agctggcgtg atcgcgctga cgaaatcgct gggcaaggaa
     4441 cttgccggct acgatatcgc ggtcaattgc gtgacgccgg tcgtcgccaa gaccgcaatc
     4501 ttcgaccaga tgaccaagga gcacatcgcc tatatgctgt cgaagatccc gcgtgggcgc
     4561 ttcgtcatgg tcgaggagat cgctgacctg gtggcctttt gcgcctcgcc ggagtgtgcg
     4621 ttcacgaccg gcgcggtgtt cgatatttca ggcggacggg caacgtattg atgagcactc
     4681 atttcggcaa gctcgacatg aaccccacca acgtctcgat gacggaggga tcgacatgcc
     4741 ccggcttgag gtattcctcc ggccggattt tgccttcgcc gggcatgaac aagtggttga
     4801 gaggcggaaa ttcccggatc gtgacattgc ggcgtcctgc cagagccgtc ttgaaccgct
     4861 tcaagtcgtc tgctgtcact tgatagtcgc gctcgccctg caggatcaag agtggcaaag
     4921 acagcttcgc ggcagtggca gccgggtcat aggcgttgag gtcggcccaa tagcgcgcgg
     4981 gtgccctgag aatattcggc ccgacgttgc ccggctttgc catcatggcg cgtgtggctt
     5041 cggccttcgt ctcctcgacc accttcttga tcgtctcgtc ggcagggccg tcgaggttgg
     5101 cgaggtattc ggcctgcaca accatgatca ggggaatcgg ccgcgttggt ccggccatga
     5161 tgatgacccc agcgatgtcg ttgcggcctg ccgcgatacg cggcgcgagc atgccgccga
     5221 gactgtggcc cacgatgacg atctttttcg catcgatttc ctggcgtccg gcaagcagcg
     5281 ccacggcggc aatcacgtct tcaatgcttt cctcccatac cgtaaatgtt ccggcaaatc
     5341 gctctggatg cgccttggtg cgcttttcgt atcgcagcgc cgcgattccg cgagatgcca
     5401 acccctcggc gatatcgcgg aaaggacgat tcggaccgat cgttgcgtcg cgatcgtgag
     5461 ggcccgagcc gtggatgagg acgaccgcag ggaccctgtc ggccgtctcc tttgcggtca
     5521 tttccggcag gctcaaggtg ccgcccaggg ccatgggacc cacggtgacg gcgaggtccg
     5581 taaatttggc ccgatccaca tagtcgggag cgctccaagg ttgagtaatg aaaaatcccg
     5641 cgactttgtc attggcgacg ctgatcttga gttcgagcat cgcgtgttcg agccaaaccg
     5701 gaacgatcac caccgtccca ccggcaatga cgcgatcgac gcgcgccggg gcgatctcgc
     5761 gtaccgcgcc accttgcaaa agaacgcctt cccacatttt ttccaatgcc ggcagcgata
     5821 gtccttgcgc cacgtccggc gtgaagcggg ccacgacggc agcgagccgg tgattaacga
     5881 catcattgac aacatcgatc gcaagctttt cggcggaccc ctgaccgtgg cccgacgggc
     5941 ccgccatccc gacacccagc gccgccaaaa tcggcatggc aatcacgagc ttagtcagcc
     6001 ggcgcttctt ggttgcgtcg ctcatcgtcg cctccgtcgt tctttgcgtg tacgctcgtc
     6061 gtagaactcc agaccggctc agttaagcta atgcatttgg gtcgctctga cgacgttttc
     6121 gtgatggcgg gtcacgccgt cggctgcgat cttggcgttc tttttcaaag tgcgcatgcc
     6181 gtcaaggcga tgattgcgaa ggtgtcccaa aatcccgtac ccttgaggga acgcgaacg
//
LOCUS       DATILV010000627         2766 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_404128, whole genome shotgun sequence.
ACCESSION   DATILV010000627 DATILV010000000
VERSION     DATILV010000627.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2766
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_404128"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1148)
                     /locus_tag="VLJ17_14790"
     CDS             complement(<1..1148)
                     /locus_tag="VLJ17_14790"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSV24280.1"
                     /translation="MLDVTTQQKYNVYDAPHADLREFLIRIEAAQELLRIPGAHWDLE
                     MGTLAEIVYHTKPEPPAILFEDVPGYSTAMRLLSGATSSSKRLAIALGLPVPNNPLDV
                     VRAYRDRMKTHQPLPPRVVTKGAVLENVDRGSAIDLYKFPVPRLHELDGGRYIGTDDL
                     VIMRDPGENWINAGTYRSMMLDKDRVSLWMSPGKHGRQIREKYFRDGKPCPVLISCGH
                     DPLLFLAGGNELKFGRSEYDYAGGHRGIPYDVVESEVHGLPMPAHAEFVIEGDMVAEE
                     TAREGPFGEFTGYYASSPSEQPVVRVRRVYYRNDPVLSIASPMRPPSDFSFSKCVMKA
                     GMVWDEIEHAGLSGVHGVWCHEFGGARMFNVVAIKQAYPGHARQAGMLA"
     gene            complement(1232..1636)
                     /locus_tag="VLJ17_14795"
     CDS             complement(1232..1636)
                     /locus_tag="VLJ17_14795"
                     /inference="COORDINATES: protein motif:HMM:NF016701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HSV24281.1"
                     /translation="MPTRRAACNCGQLHLTCEGEPARISTCHCLECQRRTGAVFGNQA
                     WFQRRQVTSIAGNSTQFGRAADSGRSLIFRFCPICGSTVYFEAEAFPGWVAVAVGSFA
                     DPDFPAPKHSVWEKRRHRWVQAFGEMPVEHSD"
     gene            1872..2705
                     /locus_tag="VLJ17_14800"
     CDS             1872..2705
                     /locus_tag="VLJ17_14800"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV24282.1"
                     /translation="MARLIQPDLERALGQPLIIENKPAASGTVGTDQVAKAPPDGYSL
                     LMAFTTHTVNPAVNAKLPYDTERDLAPIVLIGKSPLLFIVNPTVPAKTLGAFVALAKE
                     NPGKFNYGTPGAASQAHLLVALWSKLAGIEMQHVPYRGGAPAVLGTVTGEVQLTLMSP
                     IASLAQINAGTLRPLATGSAERDRHFPDLPTIAESGFPGFEAVAWVGLFTTAGTPDEI
                     VGRLNAEVNRIIRLPGIAMKFDEQGMTPEGGSAPDFGAFISRELRRWKDAARAANVSA
                     Q"
BASE COUNT          533 a          881 c          851 g          501 t
ORIGIN      
        1 gccagcatgc cggcctggcg cgcgtggccc ggataggcct gcttaatggc gacgacgttg
       61 aacatgcgag cgccgccgaa ttcgtgacac caaacgccgt gcactcccga aaggcctgcg
      121 tgctcgatct cgtcccagac cattccggcc ttcatgacgc atttactgaa cgagaagtcc
      181 gacggcggcc gcatcgggga ggctatgctg agcaccggat cgttgcggta atagacacgc
      241 cgcacccgca ccaccggctg ctcgctaggg cttgacgcat aatagccagt gaattcgccg
      301 aacggcccct ccctggctgt ctcctccgcc accatatcgc cttcgatgac gaactcggca
      361 tgcgccggca tcggcaaacc atgcacctcg ctttcgacca cgtcataggg aatgccacgg
      421 tggccaccgg cgtaatcata ttcggaacgg ccgaatttca gctcgttgcc gccggcaaga
      481 aacaacagcg gatcgtggcc gcagctgatc agcaccggac acggtttgcc gtcgcggaaa
      541 tacttctccc ggatctggcg gccatgcttg ccgggcgaca tccacaggct gacgcggtcc
      601 ttgtccagca tcatcgagcg ataggtaccg gcattgatcc agttctcacc cggatcgcgc
      661 atgatgacga gatcatcggt gccgatatag cgtccgccgt cgagttcgtg caggcgcggc
      721 accgggaact tgtagagatc gatcgcactg ccccggtcga cgttctcgag tacggcgccc
      781 ttcgtcacga cgcgtggcgg cagcggctga tgggtcttca tgcgatcccg ataggcgcgc
      841 acgacgtcaa gcggattgtt cggcaccggt aagccaagcg caatggcgag ccgcttcgac
      901 gaactagtgg cgccggacaa gagccgcatg gccgtggaat agcccggcac gtcctcgaac
      961 aggatcgcgg gcggttccgg cttggtatgg tagacaatct ccgccagtgt ccccatttcg
     1021 aggtcccagt gggcacctgg gatgcgcagc aattcttgcg ccgcctcgat gcggatgagg
     1081 aactcgcgca ggtccgcatg cggggcgtcg tagacgttgt atttttgctg tgtcgttaca
     1141 tcgagcatgg cactcacact tcccaacggc gaatttggag cataccgcgc ctagatagat
     1201 ttttcgaggc acgtcgatat cagatagcgt atcagtctga atgctcgacg ggcatctcgc
     1261 caaatgcctg cacccaacga tgccgtctct tctcccaaac tgagtgcttg ggagccggaa
     1321 aatcaggatc ggcaaacgat cccacagcga cagcgaccca cccaggaaac gcttcggcct
     1381 caaagtaaac ggtcgagccg caaatcgggc agaatcggaa gattagcgac ctgccgctgt
     1441 cagccgcacg cccgaattgg gttgagttgc ccgcgatgga ggtcacttgc cggcgctgga
     1501 accaagcctg attgccgaag acggctccgg ttcgccgctg acactcaaga cagtggcacg
     1561 ttgaaatccg cgcaggttcg ccttcacagg tgaggtgcaa ttgaccacaa ttgcatgcag
     1621 cgcgacgggt cggcattgtt catccgcggt tctttcggag ttctttaatg tgcataccac
     1681 aggcaggtgg caggtgcgag gctggtatca gggcccacca aattttcgag cgggaatcca
     1741 ggctgcggtg cgcggtcctt ttggtattgg ggctcgttgc cgtgcttgcc gctccggctt
     1801 gtgcgcagac ttggccgacc cgccccatcc acctgatcgt gccgttcgcg gcaggcggcg
     1861 ccaatgatat cgtggcgcgg ctgatccagc cggacctcga acgggcgctg ggacaaccgc
     1921 tcatcatcga gaacaagcca gcagcaagcg gcaccgtcgg cactgaccag gtggcgaagg
     1981 cgccgcctga tggatactcg ctgctgatgg cgttcaccac ccacacggtc aatccggccg
     2041 tgaatgccaa actgccctac gacaccgagc gcgacctcgc ccccatcgtg ctgatcggca
     2101 agagcccgtt attgttcatc gtcaatccca cggtgccggc gaagacgctt ggcgcgttcg
     2161 tcgcgctcgc gaaagagaac cccggcaagt tcaactacgg cacgcccggc gcggcaagcc
     2221 aggcgcatct cttagtcgcg ctgtggagca agctcgccgg tattgagatg cagcatgtcc
     2281 cataccgcgg cggcgcgccg gctgtgctcg gcaccgtgac gggcgaagtg caactcaccc
     2341 tgatgtcgcc catcgcctcg ctcgcccaga tcaatgccgg gacgctgcgg ccactcgcga
     2401 ccggcagtgc cgagcgcgat cggcattttc ccgacctgcc gaccattgcg gagagcggct
     2461 ttccgggatt cgaagcggtt gcctgggtcg gcctgttcac caccgccggc acgcctgacg
     2521 agatcgtcgg ccggctcaac gcagaagtaa atcgcatcat ccggctgccc ggcatcgcca
     2581 tgaagttcga cgagcagggc atgacgccgg agggcggcag tgcgccggat ttcggcgcat
     2641 tcatctcccg cgagctgcgc cggtggaagg atgcggcacg ggccgcgaat gtgagtgcgc
     2701 agtaggcgct atctctcccg acttccggaa gggcggcacg aagcggcgcg tggggcgaca
     2761 gcaagc
//
LOCUS       DATILV010000628         1961 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_920753, whole genome shotgun sequence.
ACCESSION   DATILV010000628 DATILV010000000
VERSION     DATILV010000628.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1961)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1961)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1961
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_920753"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..388)
                     /locus_tag="VLJ17_14805"
     CDS             complement(<1..388)
                     /locus_tag="VLJ17_14805"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV24283.1"
                     /translation="MALNSTLIKSTVVAALGGLLFGFDTAVIAGATSALTNAFQLTPG
                     GLGLTVSIALVGTVVGALFAGIPGDRYGRRDSLRGLAVLYLVSALGCAFATNWYALVF
                     FRFIGGLAIGGSSVLGPMYIAEIAPAR"
     gene            complement(379..1314)
                     /locus_tag="VLJ17_14810"
     CDS             complement(379..1314)
                     /locus_tag="VLJ17_14810"
                     /inference="COORDINATES: protein motif:HMM:NF012692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HSV24284.1"
                     /translation="MSLFGCIEAGGTKFVCGVGTGPDDLQLTTVPTTSPQATIDQIIA
                     FFRGQAGRELSAVGVGAFGPVDLHPESPTFGFITSTPKVGWQQYDLAWTLYRALQVPI
                     GFDTDVNAAAAGEARWGAGRGLPNFLYLTVGTGIGGGALVNGEVIHGLLHPEMGHIRI
                     PHDLGADPFPGSCPYHKDCLEGLASGPAMQARWGKRAQELPADHPAWALEAHYLALGL
                     ATWVCTVSPERILLGGGVMQQASLFPMIRQELLRLLNGYIDAKPLLNEIDSYVAPPEL
                     GSRAGVLGAMVLAEHIYRNPSARIGAPLAGEDAWR"
     gene            complement(1378..1779)
                     /locus_tag="VLJ17_14815"
     CDS             complement(1378..1779)
                     /locus_tag="VLJ17_14815"
                     /inference="COORDINATES: protein motif:HMM:NF016152.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HSV24285.1"
                     /translation="MNVDSIRSYCLSLPNATEKLQWGDELCFKIAGKIFAMLGLDHLG
                     LCFKCSPEIFAELIEREDIRPAPYVGRYKWVLLERLDAVGDFELEDLIRQSYDMVSAK
                     APKNSRKKPPMPSGRKPSEARPHARKRAKRH"
BASE COUNT          415 a          555 c          653 g          338 t
ORIGIN      
        1 agcgtgccgg cgcgatttcg gcgatgtaca tggggcccag aaccgaggag ccgccaatcg
       61 ccaggcctcc aataaaacga aagaagacca gcgcgtacca gttggtggcg aaggcgcaac
      121 cgagcgcgga tacaagatac aaaacagcca ggccgcgcag gctgtcgcgg cggccataac
      181 gatcgccggg aatgcccgcg aacaacgcgc ccacgacggt gccgaccagc gcaatggaga
      241 cggtgaggcc gaggcccccg ggcgtgagtt ggaaagcgtt ggtcaacgcg ctggtggcac
      301 cggcgatcac ggcggtgtcg aagccgaaga gcaggccgcc gagtgcggca accacggtgc
      361 ttttgatgag ggtggaattc agcgccatgc gtcctccccg gccagaggcg cgccgatgcg
      421 cgcgctggga ttgcgataga tatgctcggc aaggaccatc gcgcccagca cgccggcgcg
      481 actgccgagt tcgggcggtg cgacatacga gtcgatttcg ttgagcaacg gcttagcgtc
      541 gatgtagcca ttcaacaggc gcaagagctc ttggcggatc atcggaaaca agctggcctg
      601 ttgcatgact cctccaccga gcagaatgcg ttctggagag acagtgcata cccaggtggc
      661 gagaccgagc gcgagatagt gcgcttccag cgcccaggca gggtgatccg caggcaattc
      721 ctgagcgcgc ttgccccagc gggcttgcat cgcgggaccg gaggcaaggc cttcgaggca
      781 gtctttgtgg tacggacacg aaccggggaa ggggtcggcg ccgaggtcgt gtgggatgcg
      841 gatgtggccc atctcggggt ggagaaggcc gtggatgacc tcgccgttca cgagcgctcc
      901 tccgccgatt ccggtgccga cggtaaggta caggaagttg gggaggcccc gccccgcgcc
      961 ccagcgagcc tcgccggcgg cggcggcatt gacgtcagtg tcgaatccga tcgggacttg
     1021 cagggcgcgg taaagggtcc aggcgagatc gtactgctgc cacccgacct tcggagtcga
     1081 ggtgatgaag ccgaaagtgg gcgactcggg gtgaagatcg acggggccaa aggcgccgac
     1141 gccgacagcg ctgagttcac gtccggcctg gccgcggaag aacgcgatga tctggtcgat
     1201 ggtggcttgc ggggaagtag tgggaacagt ggtgagctga aggtcgtcgg gtccggtgcc
     1261 gacgccgcac acaaatttcg tacctcctgc ctcgatacac ccgaaaaggc tcaagcgatc
     1321 ctcgcgacgg gcaagtctgc cacaacgtga gcgatctcgg aaagcgatct ttcgacttta
     1381 gtgacgcttg gcgcgtttgc gtgcgtgtgg ccgggcttcg gaaggctttc ttccggaagg
     1441 cattggcggc ttctttcttg agtttttggg agctttcgcc gaaaccatgt cgtaagactg
     1501 acgaatcaaa tcctccaatt cgaaatcgcc aaccgcatcc agacgctcga gcaggaccca
     1561 cttgtagcgg ccgacgtagg gagcggggcg aatgtcttcc cgctcgatca gctccgcaaa
     1621 gatttcaggg ctgcacttga agcaaaggcc gagatggtcc agcccgagca tggcaaagat
     1681 cttgccggca attttgaagc agagttcatc tccccattgc agcttctcgg ttgcattggg
     1741 caacgataga cagtaagaac ggatggagtc gacgttcatg agtgggccgc ctcaaggatg
     1801 atttcaccac agagacacag aggcacagag gaaagggcat tcagcactca gcattcagcc
     1861 aatcaggatt gggtactctg tccactaatt gcatcggaga atcaggaagg ctctaggctc
     1921 taggtgacta accggtctca ggctcgccgc tcgccgctct t
//
LOCUS       DATILV010000629         7921 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1942456, whole genome shotgun sequence.
ACCESSION   DATILV010000629 DATILV010000000
VERSION     DATILV010000629.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7921)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7921)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7921
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1942456"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..202)
                     /locus_tag="VLJ17_14820"
     CDS             complement(<1..202)
                     /locus_tag="VLJ17_14820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24286.1"
                     /translation="MSNEINQASSRRKFLQFLAASSALTYADARALAETLLPKAKLPD
                     PMMWAPLDANNLIKSPKEAINVL"
     gene            complement(297..566)
                     /locus_tag="VLJ17_14825"
     CDS             complement(297..566)
                     /locus_tag="VLJ17_14825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24287.1"
                     /translation="MEILLCLLLRFVLVPIGATTAALVVVAFVVVGHWHSLSTPGGGN
                     WRLDLRGLDRRHRWPHGGLGVADTGMAHPMVIALACPVSFGYAAR"
     gene            complement(655..1140)
                     /locus_tag="VLJ17_14830"
     CDS             complement(655..1140)
                     /locus_tag="VLJ17_14830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24288.1"
                     /translation="MDALIRLLLRFILVPLGAAMALAAATVVVVIGHHNALLALLNAD
                     PRAQEDYFVALLFGGPLLALLLSMWAFYMFVPAVIGVLISEAFAIRSWIFHAANGGLS
                     AWLGWALTQDIRDEYRFLTEPKILVAAGLMAGLVYWIVAGWTAGFWKPIRSSPRLAPA
                     S"
     gene            complement(1268..2506)
                     /gene="rlmN"
                     /locus_tag="VLJ17_14835"
     CDS             complement(1268..2506)
                     /gene="rlmN"
                     /locus_tag="VLJ17_14835"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HSV24289.1"
                     /translation="MSIDLETAVAVVRGFVEKMPLERYVAPERPSLVGKSRVELAAAL
                     GELGAPQAQHKMRVQQLWHWLYVRGVTSFDAMTSVSKELRAELEKRFSLDRPEVVAEQ
                     ISVDGTRKWLLRLPGENPNERPHEVECVYIPETGRGTLCISSQVGCTLNCTFCHTGTQ
                     RLVRNLTAGEIVGQIMVARDRLGDWPGERPPDGAIVPTDGGRFVTNIVMMGMGEPLYN
                     FEAVRDALLVVADNEGIAISKRKITVSTSGVVPNIERTGSEIGVMLAVSLHAVCNDLR
                     DELVPLNRKYPIETLLEACRNYPGLTNAKRITFEYVMLKGVNDSFADAKALVRLLAGI
                     PAKINLIPFNPWPGTIHECSDWETIEKFSEVVFNAGYSAPVRTPRGRDILAACGQLKS
                     ATEKLSARERMALRAMAMTE"
     gene            complement(2663..3334)
                     /locus_tag="VLJ17_14840"
     CDS             complement(2663..3334)
                     /locus_tag="VLJ17_14840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion associated locus B family protein"
                     /protein_id="HSV24290.1"
                     /translation="MTCGNIVPRRLTRRYSISSVLPAIIAASCVGVGVGVGTASAQQQ
                     PAPAPKPVTAPKPAAPKPTTSAAAPPPVPGAAQPTLLGQFGDWGAYTATPGGKKVCFA
                     LAKPANSTTSPPNRPRDAAYMFVSSRPSEKVKDEVSIIFGYGLKPNADANIEVSGTNY
                     AMYTQADGAWVKNAAEEPRLIETMRKGSDLTVKGTSAKGTATTDVYSLKGLPQALDRV
                     GQECR"
     gene            complement(3457..3852)
                     /locus_tag="VLJ17_14845"
     CDS             complement(3457..3852)
                     /locus_tag="VLJ17_14845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YkvA family protein"
                     /protein_id="HSV24291.1"
                     /translation="MDDDVAVPHEEARVRREFWPKFRRFAARLPFAEDLVTVYFCAFD
                     RETPRRVQVALIGALAYFVLPFDFVPDMLPFIGFTDDAAVLATAIRLVSVHIRPQHRE
                     AARRVLAHAAASEFGASGLEEREFGTSSV"
     gene            4110..5228
                     /locus_tag="VLJ17_14850"
     CDS             4110..5228
                     /locus_tag="VLJ17_14850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008834837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HSV24292.1"
                     /translation="MSWSVNIGSIAGTAIRIHITFLLFLIWIFAAGWASGGVNDALNN
                     LVFIVLLFGCVLAHEFGHIFTARAFGVATPDVTLLPIGGVARLERIPEKPSEEFLVAI
                     AGPLVNVAIAIVLIAVTPTHLSADHFAAMESPKVSMIDRLAEVNLFLAVFNMIPAFPM
                     DGGRVLRALLAIRLGHVRATEIAAMIGQWTAFGLGFIGLFYNPILIFIAIFVYLAAAS
                     EAQMVSLRAMSRDVPVTAAMVTQFATLTRDEHIDAAVQTLLQTSQTEFPVVDDNHRLI
                     GIVGRAEIIRALRELGPTALVSDVMVQNIPSIERSHRLEEAFRLLQEKSVPAVGVVDV
                     AGRLIGLVTSETVGEMLMVQKALPEGARLGPWSRPAGV"
     gene            complement(5265..5840)
                     /locus_tag="VLJ17_14855"
     CDS             complement(5265..5840)
                     /locus_tag="VLJ17_14855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008525756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="demethoxyubiquinone hydroxylase family protein"
                     /protein_id="HSV24293.1"
                     /translation="MDPRDQLTIARIVKVNHAGEYGAIRIYRAQLWLARRLYPDVVRF
                     LDETLGHEIQHCETFRNAMPQRNARPCRVMALWGNGGFVLGFLTALLGRKGIWVCTAA
                     VEATVHRHLEEQLNFLVSIDCELHRLISAIQEEELTHLRHAEQRIGTGSARSRFLSTV
                     IAATTEAVIWLSTWGDSTRLAKEFAAAKPTG"
     gene            complement(5869..6870)
                     /locus_tag="VLJ17_14860"
     CDS             complement(5869..6870)
                     /locus_tag="VLJ17_14860"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSV24294.1"
                     /translation="MPYCSRREKLLVVAMIAFAVCPPVHAAETEAEACRSPVPAAMGG
                     PLLRDPGKIILRWLSTSNYELVYRGQVFLLDAYFERGPRNRPTGIVPSEVSRTDAIFI
                     GHAHFDHMSDAAPIAQKTKAKVIGAPITIETAYKLGVPEGQAIAVAGGETLKFDGITV
                     DAALAQHSTLSREVLDTLGKLFDLEVGPPTPEQAEAEKAILAKGTFAPDVITKGTIAY
                     GFTFDTGYKLVWIDSAGPVTDGVRALAQKLGPVDIAIVAYQGHPVAQVQVPVTLELVK
                     QFRPRIFMPAHHDQIFGTFVDLGVEPLFEAIKEALPGTATIAPLPRLAHCVDISKKP"
     gene            7100..>7921
                     /locus_tag="VLJ17_14865"
     CDS             7100..>7921
                     /locus_tag="VLJ17_14865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HSV24295.1"
                     /translation="MQLRNVAIIAHVDHGKTTLVDRLLQQSGAFRENQRVADRALDSN
                     DLERERGITILAKATSILWQDTRINIVDTPGHADFGGEVERILNMVDGALVLVDAAEG
                     PLPQTKFVVSKALKMGLKPIVVINKVDRPDARPHEVVNEVFDLFATLDASDEQLDFPI
                     LYGSAKEGWMAASPEGPKDARMQPLFDLVLRHVAPPHVEDGPFRLLGTILEANPYLGR
                     VVTGRITSGAVAPNQMVKVLDHDGRLIEQGRVSKLLAFRGLERVGLNEASAGDIVS"
BASE COUNT         1534 a         2473 c         2413 g         1501 t
ORIGIN      
        1 cgagcacgtt gatcgcttcc ttcgggctct tgatcagatt gttggcgtcg aggggtgccc
       61 acatcatcgg atccggtagc ttcgcctttg gtagcaaggt ctccgccaat gcacgcgcgt
      121 ccgcataggt gagcgccgag ctggcggcga gaaactgcag aaacttgcgg cggctgctgg
      181 cctgattgat ctcgttggac attttaaatc ctcccgatgg atgcgatgca gcagcttggc
      241 tgcaatttaa ccgaagaggt gtattcggct tattgtcgcg catccgacgc tgcatcctat
      301 ctcgccgcat atccgaacga aaccggacat gctaacgcta tcaccatagg gtgggccatt
      361 ccggtatcgg ccacaccaag cccgccgtga ggccagcggt gacgacgatc aaggcctctc
      421 agatcaagac gccaattgcc gccgccaggt gtagaaagcg aatgccaatg cccgacgaca
      481 acgaacgcca ctaccaccag ggccgcggtg gtcgccccga tcggcaccag aacgaagcgc
      541 aacaggaggc aaagcaggat ctccatgcat tcgatccgtt gcagccgagg tgggcatggc
      601 acgaaaagca cgccttcccc cacgttacaa tgtgatcctg gtcgatctcc gcttctagga
      661 cgctggcgcc agcctgggtg acgatcgaat cggtttccag aacccggccg tccaaccggc
      721 aacgatccaa tacacaaggc cggccatcag ccctgcggcg acgagaatct tgggctcggt
      781 gagaaagcga tattcgtcgc ggatatcttg tgtcagcgcc cagccgagcc aagccgaaag
      841 cccgccgttg gcagcgtgga aaatccatga ccgaatcgcg aaggcctctg aaatcagcac
      901 gccgatcacg gctggaacga acatgtagaa cgcccacatc gacagcagca atgcgagcag
      961 cggaccgcca aacagaaggg caacgaaata atcctcttgc gcccgcggat cggcgttgag
     1021 cagggcgagc agcgcgttgt ggtgcccgat aacgacaact accgtcgcag ccgcaagcgc
     1081 catcgcggcc ccgagcggca ccaggatgaa gcgcaacaga aggcgaatca gggcgtccat
     1141 gcgtgtggaa ccgcgcgcgt cttgcgcgca tcgcacgagc gggcgggacg cccgcggtcc
     1201 aaagcgagcg cgcttaacct tgatttcgta gcctcgatca aacaagggcc tgctgacgac
     1261 atggatacta ttccgtcatc gccatggcac gcagcgccat gcgctcgcgc gcggacagct
     1321 tttcggtggc gctcttgagc tgtccgcagg ccgccagaat atcgcgcccg cgcggggtgc
     1381 gaaccggtgc cgaatagccg gcgttgaaca cgacttcaga aaacttctcg atcgtctccc
     1441 agtccgagca ttcgtggata gtgccgggcc aagggttgaa cggaatcaga ttgatcttgg
     1501 ccggaatgcc ggcgagcagc cgcaccaagg ctttagcgtc ggcgaaggaa tcattgacgc
     1561 ccttgagcat cacgtattcg aaggtgatgc gtttggcgtt ggtcaggcca ggatagttgc
     1621 ggcaagcctc cagcagcgtc tcgatcggat atttgcgatt gagcggcacc agctcgtcgc
     1681 gcagatcatt gcacaccgcg tgcagcgaaa ccgccagcat gacgccaatc tcgctgccgg
     1741 ttcgctcgat gttcggaacc acgcccgacg tcgagaccgt gatcttgcgt ttggaaatgg
     1801 cgataccttc gttgtcggcg accaccagca acgcgtcgcg tacggcctcg aaattgtaaa
     1861 gcggctcgcc catccccatc atcacgatat tggtgacgaa gcgcccgccg tcggtcggga
     1921 cgattgcgcc atcgggcgga cgctcgcccg gccagtcacc gagacgatcg cgggccacca
     1981 tgatctgacc gacgatttct ccagccgtga gattacgcac cagccgctgg gtgcccgtat
     2041 gacagaacgt acagttgaga gtgcatccga cttggctgga aatgcacaag gtgccgcgtc
     2101 cggtttccgg aatgtagacg cattccactt cgtgcggccg ttcgttgggg ttctctcccg
     2161 gcagtcgcag cagccatttt cgcgtgccgt cgaccgaaat ctgttcggcc acgacctcgg
     2221 gccggtcgag ggagaatcgt ttttcaagct cggcgcgcag ctccttggat acgctcgtca
     2281 tggcatcgaa gcttgtgacg ccgcggacgt agagccaatg ccagagttgc tggacccgca
     2341 tcttgtgttg cgcctgcggc gcgccgagct ccccgagcgc cgccgcaagc tcgacacgtg
     2401 atttgccgac caacgagggc cgctccggag ccacatagcg ctccagcggc atcttctcga
     2461 caaatcctcg gacgaccgcg actgcagtct caagatcgat actcatgata tcctgtgccg
     2521 gctcaccgtg gtcacgacga gcatatgggc gccggaaggg aaataccatg ggcggcgatg
     2581 acacgccgag gtgtccatta ttcctgcctg acagacgtgc gccacgcaac gacgaactgg
     2641 gcaatgccgc aactctaacg gcctatcggc attcctgtcc gacgcggtcg agtgcctgag
     2701 gcaagccttt gagtgagtaa acgtccgtgg tggcggtccc cttggcggac gtgcccttga
     2761 ccgtcagatc cgagcctttg cgcatggttt cgatcagccg gggctcctcc gcggcatttt
     2821 tcacccaagc gccgtcggcc tgggtataca tggcatagtt cgtgcctgag acctcgatat
     2881 tggcatctgc attgggcttc agcccgtaac cgaagatgat cgacacttcg tccttgacct
     2941 tttcgctcgg ccgcgaggaa acgaacatat aggccgcatc gcgcggccga ttcggcggcg
     3001 acgtggtcga attcgccggc ttggcgagcg caaaacacac tttcttgcca cccggagtcg
     3061 ccgtataggc accccagtcc ccgaattggc caagcagggt cggctgcgca gcccccggaa
     3121 ccggcggcgg ggccgcagcc gacgttgttg gcttcggagc cgcaggcttg ggcgccgtca
     3181 cgggcttggg cgccggcgct ggctgctgtt gcgctgatgc agtgccgacg ccgacaccga
     3241 caccgacaca acttgccgcg atgattgccg gcaagaccga ggaaatcgag taacgtctgg
     3301 tcagccggcg aggcacgata ttaccacacg tcatgagcaa gtcaccccac gagcaagtcg
     3361 atgaaattac gtaattacgt tgattcatca agctggcaac ctcacggcac gttgacgcgg
     3421 tggatatctt ctgcgcgggg aaaaaattct tggcattcag accgaagagg tgccgaactc
     3481 tcgctcttct agccccgacg cgccaaattc cgaggccgcg gcatgcgcaa ggacacggcg
     3541 cgccgcctcg cgatgttgcg gtcgaatatg aacggaaacc agccgaatcg cggtggccag
     3601 cacggcggca tcgtcggtga agccgatgaa cggcagcatg tcgggaacga aatcgaacgg
     3661 cagcacgaaa tatgccagtg cgccgatcaa cgcgacttga acccggcgcg gcgtctcccg
     3721 atcgaaggcg caaaaataga ccgtgaccag atcttcggcg aatggaagcc tcgcggcgaa
     3781 ccgtctgaat ttcggccaga attcgcggcg gacgcgggct tcctcgtgcg gcactgcgac
     3841 atcgtcgtcc atctcgactc cgtgatgtcc gaacgctcgc ctgatcatta tcatccctcc
     3901 ggcggcaaag gccgatgcct catcatcaaa cctggtagac ttctcgggca aaaacaagac
     3961 catgcggcga cgaggtgggg gtgggggttg aattgggcat ccacttcccc tgctggcaag
     4021 gatttttgcc ggatcgggcc tcaagctagc gattgcgtcg gcgcgccccc atctttcccg
     4081 atgttggtgg acagttggag ggtgcgctca tgtcgtggtc ggtgaacatc ggctcgatcg
     4141 ccggcacggc gatccgcatt catatcacgt tcttgttgtt cctgatctgg attttcgcgg
     4201 caggctgggc ctcgggtggc gtcaatgatg cgttgaacaa tctggtcttc atcgtcttgc
     4261 tgttcggttg cgtgctggcg catgaattcg gccatatctt cacggcacgc gcatttgggg
     4321 tggcgacgcc cgacgtcacc ctcctgccga tcggcggagt ggcgcggctc gaacgcatac
     4381 cggaaaagcc gagcgaggaa ttcctggtcg ccatcgcggg cccgctggtc aacgtggcta
     4441 tcgcgatcgt gctgatcgcc gtcaccccga cgcatttgag cgccgatcat ttcgccgcca
     4501 tggaaagccc caaggtgtcg atgatcgacc gtttggcgga ggtgaacctc ttcctcgcgg
     4561 tattcaatat gatcccggca tttccgatgg atggcggccg cgtcttgcgg gcgctgcttg
     4621 caattcggct cggccatgtg cgggcgaccg agatcgccgc catgatcgga cagtggaccg
     4681 cgttcgggct cggcttcatc ggactgttct acaatccaat actgatcttc atcgcgatct
     4741 tcgtctatct ggcggcggcg tcggaagcac agatggtatc gctgcgggca atgtctcgcg
     4801 acgtgccggt caccgccgcc atggtgacgc agttcgccac gctcacgcgg gacgaacata
     4861 tcgatgccgc ggtgcagacg ctgctgcaga caagccagac cgagtttccc gtcgtcgatg
     4921 ataaccaccg cctgatcggc atcgtcggcc gcgcggaaat catccgggcg ctgcgggaac
     4981 tcgggcccac ggcgcttgtc tccgacgtca tggtgcagaa catcccgagc atcgagcgat
     5041 ctcaccgact cgaagaagcg tttcggcttt tgcaagagaa atccgtgccg gccgtgggcg
     5101 ttgtcgatgt tgcgggtcgc ctgatcggat tggtgacatc tgaaaccgtc ggagagatgc
     5161 tgatggtaca gaaggcgttg ccggagggcg cccgcctcgg accgtggagc cgtccggcgg
     5221 gcgtttgaat gcagcgcgct tgcgagccga ccttggatgg aagatcagcc ggtcggcttc
     5281 gctgccgcga attcctttgc caaccgtgtg gagtcgcccc acgtcgacag ccaaatgacc
     5341 gcctcagtgg tcgccgcaat gacggtgctg aggaaccgag atcgcgcaga gccggtgcca
     5401 attctctgct cagcgtgcct cagatgcgtc aactcctcct cctgaatggc ggatatcagc
     5461 ctgtggagct cgcagtcgat gctgacaaga aaattcaact gctcttcgag atgcctgtga
     5521 acggtcgctt cgacggcagc cgtgcaaacc catatccctt tgcgtcccaa cagcgccgtc
     5581 aggaagccca gcacaaatcc gccattcccc cataacgcca tgacgcggca tggccgcgcg
     5641 tttcgctgcg gcatggcatt gcggaacgtc tcgcagtgct ggatctcgtg accgagcgtt
     5701 tcgtcaagaa acctgacgac atcgggatat aagcggcgcg caagccagag ctgggcgcga
     5761 tagatgcgaa tggcgccata ctcaccagca tggttgacct tcacaatcct ggcgatcgtc
     5821 agctgatccc gcgggtccat gaccttgtct ctatactgct gccgcgtctt agggcttctt
     5881 tgaaatgtcg acgcaatggg ccagccgggg cagcggcgcg atcgtcgccg ttcctggcag
     5941 cgcctccttg atcgcctcaa acaaaggttc gacgccgagg tccacgaaag tgccgaaaat
     6001 ctggtcgtga tgggcgggca tgaagatgcg gggccggaac tgtttgacga gttcgagtgt
     6061 caccggaacc tgcacctgcg ccaccggatg gccctgatag gccacgatcg cgatgtccac
     6121 cggcccgagt ttttgcgcca acgcgcggac gccgtccgtg accggaccgg cgctgtcgat
     6181 ccaaacgagc ttgtatccgg tatcgaacgt gaacccgtac gcaatggtgc ccttggtaat
     6241 gacgtcgggc gcgaaagtcc ccttcgccag aatggccttc tcggcttcgg cctgctccgg
     6301 cgtcggcgga ccgacctcaa ggtcgaagag cttgccgagg gtgtcgagca cctcccgcga
     6361 cagcgtggag tgttgggcca atgccgcatc cacggtgatg ccgtcgaatt tcagcgtctc
     6421 gccgcccgcc acggcgatgg cttggccctc cgggacaccg agcttgtagg cggtctcgat
     6481 ggtgatgggc gcgccgatca ccttggcctt ggtcttctgc gcgatcgggg cggcgtccga
     6541 catgtggtcg aaatgagcgt gaccgatgaa aatcgcatcg gtccgactga cttcgctcgg
     6601 cacgatgccg gtcggccggt tgcgcgggcc ccgctcgaaa taggcgtcaa gcaggaacac
     6661 ctggccgcgg tagacaagct cgtagttgga ggtcgaaagc cagcgcagaa tgatcttgcc
     6721 cgggtcacgc agcagggggc cgcccatggc ggccggcacc gggctccggc acgcctcggc
     6781 ttccgtctcc gccgcatgca ccggcgggca gaccgcaaac gcgatcatgg ccacgacaag
     6841 cagcttctct ctccgagagc aatagggcat ggtgtcctcc tcggttgaat gtgccgtttt
     6901 cggcgttgca caatgccggc gaatgactat atctcgtggc aattcgcttt tttgagaaag
     6961 cacttggtcg ggactcgcgc tggtagcgtt cgagtcccga tgtcatttgc gaatgaaagc
     7021 tcatcgtctc gtaatcctcg gtagactgcg gtgattgcag ggacgcgaat tttcatacca
     7081 caaccttgag cagccctcga tgcaactgcg aaatgtcgcc atcatcgccc atgtcgacca
     7141 cggcaagacc accctggtcg accggctgct gcagcaatcc ggtgccttcc gcgagaacca
     7201 gcgggtggcc gaccgcgcgc tcgattccaa cgatctcgag cgcgagcgcg gcatcaccat
     7261 cctggccaag gcaacctcga tcctctggca ggacacccgc atcaacatcg tcgacacgcc
     7321 cggccacgcc gatttcggcg gcgaggtcga gcgcatcctc aacatggttg acggcgcgct
     7381 ggtgctcgtc gacgccgccg agggccccct gccgcagacc aaattcgtgg tgtcgaaggc
     7441 gctcaagatg gggctcaagc ccatcgtcgt gatcaacaag gtcgaccgcc ccgatgcgcg
     7501 tccgcacgag gttgtcaatg aggtgttcga tctgttcgcg accctcgatg cgtcggacga
     7561 gcaactcgac tttcccatcc tctacggctc ggccaaggaa ggctggatgg cggcgagccc
     7621 cgagggcccg aaggacgcgc gcatgcagcc tctgttcgat ctcgtgctgc gccatgtggc
     7681 accgccgcac gtcgaggacg gccccttccg cctactcggc accatcctcg aagccaatcc
     7741 ctatctcgga cgcgtcgtca ccggccgcat cacctcgggc gccgtcgcgc cgaaccagat
     7801 ggtcaaggtt ctcgaccatg acggcaggct gatcgagcag ggccgcgtct ccaagttact
     7861 cgcttttcgc ggccttgagc gggtcgggct caacgaggcg tccgccggcg acatcgtctc
     7921 t
//
LOCUS       DATILV010000630         3354 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_659133, whole genome shotgun sequence.
ACCESSION   DATILV010000630 DATILV010000000
VERSION     DATILV010000630.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3354)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3354)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3354
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_659133"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            14..1234
                     /gene="maeA"
                     /locus_tag="VLJ17_14870"
     CDS             14..1234
                     /gene="maeA"
                     /locus_tag="VLJ17_14870"
                     /EC_number="1.1.1.38"
                     /inference="COORDINATES: protein motif:HMM:NF010052.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxaloacetate-decarboxylating malate
                     dehydrogenase"
                     /protein_id="HSV24296.1"
                     /translation="MLGLGDLGANGAGIPIGKLQLYTACAGVPPQYLMPMYLDAGTNN
                     EQYLHDPLYLGMRKTRPSTDELYSFVDEFMEAVQEVFSKCCVHFEDWTGKDAVHLLER
                     YRDKYCVYNDDVQGTAGITLAGMINAAKLKGKKLKDEKYLFLGAGSAGIGLANLLCSA
                     LVQQGMTLQEAQAHVYMFDVNGLLESTRKDLFDFQKPYAHKHAPTRDFVAAIESIKPT
                     AIIGVSTVGGAFTQKVVETMSRINERPVILALSNPTDHAECTAEQAYTWSKGKAIYAA
                     GVQFAPVHYNGQTFLPGQANNFYIFPAVGMAIFATQAKRVTDEMFIEAGQAVADQVPA
                     ELLKQGMLYPLQSDILETEIQTAARVAKLVFDSGLARVERPAGDMVTFIRKQVYKPEY
                     ANSLPSQTQTRRAA"
     gene            1231..2742
                     /locus_tag="VLJ17_14875"
     CDS             1231..2742
                     /locus_tag="VLJ17_14875"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018454328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004333 - fumarate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0006106 - fumarate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006108 - malate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HSV24297.1"
                     /translation="MITPKTKSNTTRPSHTGSSTNRKRLASGPATTTPRNGQFRVESD
                     SLGEVKVPADRLWGAQTQRSLEHFKIGKDLIPREMITSYATLKKGAALANHTGKRLDD
                     ERFRLIVQTCDEILAGQHHDMFPLHVWMTGSGTQFNMNVNEVISNRCCQLDGTPLGSK
                     TPVHPNDHVNMSQSSNDSFPSAMNIAAAVNVKQRLIPAVTALRDAIAAKAAQWKDVVK
                     IGRTHMQDATPLTYEQEWSGYVGTLTDSLNRIENAVKGVYRLALGGTAVGTGINAAPG
                     FGEAAAAEIGKLTKLPFVSAPNKFAVQGSHDDLVELSGTLRTLAVSLYKIANDIRLMS
                     CGPRAGFAELIIPSNEPGSSIMPGKVNPTQAEALAMVAVQVMANDVAVGFGGAGGYLE
                     MNVYKPLIIFNVTHSITILTDSCTNFRRFLIEGTKPNLRKIKEYVDRSLMLVTALSPV
                     IGYDKSSKIAHYALDNDLTLKEGALKLGFVTEDEFNRVVDPAKMVRPYVAQAT"
     gene            2766..>3354
                     /locus_tag="VLJ17_14880"
     CDS             2766..>3354
                     /locus_tag="VLJ17_14880"
                     /inference="COORDINATES: protein motif:HMM:NF018604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YoaK family protein"
                     /protein_id="HSV24298.1"
                     /translation="MLPIVLSTTAGAVDVIGFLALGGLFTAHITGNLVVLAAHYVTGR
                     FSQIAPLLSVPVFVVVLGIVTVLFANKAPRRARRTLLILHAGLLMGFLALGGWLGPFT
                     NPDSGIAVSVGMIGVAAMATQNALVRLELPGFPSTAVMTINITQLAIDLALLVQGKGD
                     PPDIARARRGARLTFPSVIGSVAGCAAGGFLELYFG"
BASE COUNT          754 a          947 c          944 g          709 t
ORIGIN      
        1 cgacggcggg cgtatcctcg gtctcggtga cctgggagca aacggggccg gtatcccaat
       61 tggcaaattg cagctctaca ccgcgtgcgc cggagtgccg ccgcaatatc tgatgccgat
      121 gtatctcgac gccggcacta acaacgagca gtacctgcat gacccgctct atctgggcat
      181 gcgcaagaca cgcccgtcga ctgacgagct ctattccttt gtcgacgaat tcatggaagc
      241 cgtccaggag gtgttttcga agtgctgcgt tcactttgaa gattggaccg gcaaagacgc
      301 tgtccacctg ctcgagcgtt accgcgacaa gtactgcgtt tacaacgacg atgtgcaagg
      361 cacggctggg atcactctcg cgggaatgat caacgcggcc aagctgaagg gtaagaaact
      421 gaaggatgag aagtatctct tcctcggcgc tggttccgct gggatcggct tggccaacct
      481 gctctgttcc gcgctcgtcc agcaaggaat gacgctgcag gaagcgcagg cgcacgtcta
      541 catgttcgac gttaacggcc tgttggaatc gacccgcaag gatctcttcg atttccaaaa
      601 gccgtatgcg cacaagcacg cgccgacgcg ggatttcgtc gcggcgatcg agagcatcaa
      661 accgacagca atcatcggtg tcagcactgt cggcggcgca ttcacgcaaa aggtggttga
      721 aacgatgtcg cgtatcaacg agcggcctgt catcttagct ctgtcgaatc cgactgacca
      781 cgccgagtgc acggccgagc aagcttatac ctggtcgaag ggcaaggcga tctacgcggc
      841 cggtgtgcag ttcgcaccgg ttcactataa cggccagaca tttctaccgg gacaagcgaa
      901 caacttctac atcttcccgg cggtcggtat ggcgatcttc gccacgcagg cgaagcgcgt
      961 gaccgacgag atgttcatcg aggctggaca agcggtggcg gaccaggtcc cggctgagtt
     1021 actcaagcaa ggcatgctct acccgttaca gtcggacatt ctcgaaaccg agattcaaac
     1081 tgctgcgcgg gtggcaaaac tagtgttcga ttcgggtctt gcccgcgtcg agcgaccggc
     1141 gggcgacatg gtcacgttta ttcgcaaaca agtctacaaa ccagaatatg caaacagtct
     1201 gccatcgcag actcaaactc ggagagcagc atgattacgc ctaaaactaa aagcaacacc
     1261 actcgaccaa gccacaccgg ctcgtcgaca aaccggaaac gcttagcatc cggaccagca
     1321 acaaccacgc ctcggaatgg ccaattccga gtcgaatcag attcgttagg cgaagtcaag
     1381 gttccggcgg atcgcttatg gggcgcacaa acgcagcgat ctctggagca tttcaagatt
     1441 ggaaaagatc tgatcccgcg ggagatgatc acgtcttacg cgacactgaa gaaaggcgcg
     1501 gccctcgcca atcataccgg gaaacggctc gatgacgagc gcttccgcct cattgtgcag
     1561 acctgcgatg agattctggc aggccagcat cacgacatgt ttccgttgca tgtttggatg
     1621 accggcagcg gcacgcaatt caacatgaac gtgaacgagg tcatctcgaa tcgttgttgt
     1681 cagctcgacg gcacgccgct tggcagcaag acgccggtcc atccgaacga tcacgttaac
     1741 atgtcgcaat cgtctaacga ctcattcccg agcgcgatga acatcgcggc ggcggtgaat
     1801 gtgaagcagc gacttattcc ggctgttact gcattgcgcg atgcgatcgc cgcgaaggcc
     1861 gcccaatgga aagacgtggt gaagattggc cgtactcaca tgcaggacgc gactccactc
     1921 acttatgaac aggagtggtc aggctatgtc ggcacgctca ctgatagtct caatcgcatc
     1981 gagaacgcag tgaaaggagt ctatcgactt gcgcttggtg ggactgcagt cggcaccggc
     2041 atcaatgccg cgccgggatt tggggaagcg gccgctgctg aaattggcaa gctgaccaag
     2101 ctgccgttcg tcagcgcgcc taacaagttt gctgtacagg gatctcacga cgatctggtc
     2161 gaactttccg gtacactgcg gacgctagca gtctcgctct acaagattgc caatgacatt
     2221 cggctgatgt cgtgcggtcc gcgcgccggc ttcgccgagc taatcatacc atctaatgag
     2281 cccggctcgt cgatcatgcc cggcaaggta aatccgacac aagccgaggc gttggcgatg
     2341 gtggcggtcc aggtcatggc aaatgatgtg gcggtgggat ttggcggtgc cggtggttat
     2401 ctcgaaatga acgtgtacaa gccgctgatc atcttcaacg tcactcactc gatcacgatc
     2461 ctgacagata gctgcacgaa cttccgcagg ttcctcattg aaggcacgaa gccaaatctg
     2521 aggaagatca aggaatacgt ggatcgctcc ttaatgctgg tgaccgcact ctcgcccgtg
     2581 attggctacg acaagtcctc gaaaatcgcc cattacgcct tagacaacga tctcacactc
     2641 aaggaaggcg ccctcaagct gggcttcgta accgaagacg agtttaaccg cgtggttgat
     2701 ccggcaaaga tggttcgccc ttacgtggca caagccactt gatggaaatc agagcacctg
     2761 attggttgct gccgattgtc ttgagcacga cagcgggtgc ggtcgatgtt attggatttc
     2821 ttgcgctcgg aggactcttt actgcgcata ttaccgggaa tctggtggtg ctcgccgctc
     2881 attatgtaac cgggcgcttt agtcagatcg ccccacttct atcagtacct gtgttcgtcg
     2941 ttgtgctcgg catagttacc gttttgttcg caaacaaagc gccccgtaga gcccggcgaa
     3001 cattgttgat tctccacgca ggtctcctga tgggattcct cgcgctcggc ggttggctcg
     3061 gccctttcac aaaccctgat agcggaattg cagtatcggt gggcatgatc ggcgttgccg
     3121 cgatggcaac acagaatgcg ctggtcagac tcgagctacc tggatttccg tcgaccgcgg
     3181 tgatgacgat aaacataact cagctggcga tcgatcttgc cttgctcgtc cagggcaaag
     3241 gcgacccacc agatatcgct cgagcccgcc gtggcgctcg cttgactttt ccatctgtga
     3301 tcggatccgt tgccggctgc gccgccggcg gttttcttga actttatttt ggac
//
LOCUS       DATILV010000631         8372 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1685561, whole genome shotgun sequence.
ACCESSION   DATILV010000631 DATILV010000000
VERSION     DATILV010000631.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8372)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8372)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8372
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1685561"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..844
                     /locus_tag="VLJ17_14885"
     CDS             <1..844
                     /locus_tag="VLJ17_14885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24299.1"
                     /translation="DGMGSPNGTAIPMGTERVAVLALDQQPVTSNGLSGWHAGQELAY
                     VGWWSALASGAVVHAEGARVRRTAQRFRAGWIHSTEFVTGTNIVATRFVSPVQAVAVL
                     IDDPASSDAARGLALTLDGANRLTDASGQPLPATVVVIANRSALIYPLAPPPSPALGP
                     VTVSVGSQDGWHLAGVIGGNESVDSMAKRIAANGLEALIAPIVATGQGLVQLAWKPPS
                     TPVGSPRSASGKASAPVQQADTPGKKKTTQKSSSHKPETKRKNETQSKSKKRSPARPK
                     KGRS"
     gene            998..2902
                     /locus_tag="VLJ17_14890"
     CDS             998..2902
                     /locus_tag="VLJ17_14890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24300.1"
                     /translation="MPPDQILSTYPPANAEGSFEARLPQVVLKRRTLPWERVSDAGNR
                     AVPWLALVVIAEGEGQISGETPVKDCVTPGVTLNGPNDVATGFYLSVSETVVNKVFPT
                     HDDLALLTHVREVDLSDTELAMGDDDGFLAIVMANRLPQYDRINCVPVRYMACLINLE
                     GQLDTLPTPLEFTFTFDAMAYVQDVRTFAAAAHTSADKYVMGSGLNVALSPSVPNPQV
                     VGPIHPKALQAGAPATFAAPAVTPPIAERAPVSASWSTTQTKVANIAASSAPAEAGRL
                     VRDAMTAGFRFPVDKIVLEKVYRFPVLAHWSFTCTGAGSFETLMQGLDVGLLGTLPAD
                     PTTQPKPDCAPPPKGDAPPPTDPPRPAAEVTDTGHVGLHHLTRRGDSLRAWYRGPLTL
                     HVTERSQPDADGHLPLANVSDQLRRVTPDGREDLSLAGAFEIGRLLALSQPSVVSALM
                     RWRQEQFGAERARQLAAKTLEKLSALKPDPAASIHDLGQLVGKQVVLMAAQSPEKMLA
                     VNRPLVDPGRPLEYLTSGMEQIIADGFGFSLPAVQRGAGSVGITAALSQASVPKSDSV
                     GFDTNAAAQLKDGLSSAVEMVTAGAVQRTPAGGGLRAAVRTKAGEERDALDDLLDQAA
                     EKQQRGKERK"
     gene            2899..3897
                     /locus_tag="VLJ17_14895"
     CDS             2899..3897
                     /locus_tag="VLJ17_14895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24301.1"
                     /translation="MNSAFFTSQVVFSAVKAAVMQIVVTPSDNDPDMGDRIVPLDLRQ
                     WLARLRLLDSVPFAYLTPDSLLLPPESIRFFYVDRNWTDALIQGALSVGTVNSSDRAQ
                     LEQLHGQIRDEIDQEERVVREPGGEAVQKGPAGTITGFLLRSRAVSGWPGMHVRAYRK
                     ELGKDNEIIPESSPDRIKVLRMERLSPAVLLVLFDGVPVIVHVEEPRCGVQFGIRLEA
                     SGAANQFNAFVIARDANTSDDVPPSPPGTHVPVTFRSGSPGVLDLKRTAQSLINTPGT
                     HIGPNLDGAEFALEMIRYPYRQVFGDPSQGGVGNIRDVFRVSISMTQLKAKFLATI"
     gene            3945..7841
                     /locus_tag="VLJ17_14900"
     CDS             3945..7841
                     /locus_tag="VLJ17_14900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24302.1"
                     /translation="MANRFDPDTVRLAMVSSRWTGLVRLDASPAAIAQWDPDLLRETR
                     VVVPVDLQAMYVPVGDATPYVRLPFTLTTVDGQPPAPMPPPFAPGAVRPAGVYLHWAP
                     PDALLRGTLQDVDDSSRNRLGLPPLPDRWVVLRIVAPTGATKPIVTGWVLEADTAKAI
                     LLDQWPTGSAAATPAGKTVEAKQLTGTVGGSTAWVGVFDAVLNRLSFYDPLTDLAQLA
                     PNGVVDDLAAYMVAGWWSDAKLDPLYGAETDSSLSVRLTQLGWNLMTDQEGGDKVEGS
                     RKIQTALRDSLGLKTAARYGSLAADQVSRTAVEPLLQETATPLRMYSPAVASLVSNAA
                     NVIASEPKWPRLALLHGSVHGVPVKGPVVIDQIPPADGVDLALGHHNDDVASALAAAG
                     SGVVSPDDRRDLERLLSAFTAQILPELGTSDGAVETDEHEHDAGFSSLPGGPGAVDRL
                     RKGAESGPLSAGRAARSQMARVGMASVLERGVTLSKLALKRVDLVSGTVQDQRLAMAL
                     FTASNPPITQPTVEVQEVRRPAPRYYVPLDPLIAVRNAKRSLRYGGDGRTSPDQRLQC
                     RWPSQIPTQAQGLIDGRDYVDALPSGGIPDEVLTLVRNTVVQDPYFVPWLAQVEANRR
                     NLDKTLTMNRLAAESAIRFGANGVYDGTTTAFQQAAFQGANLTVGQPSSFVQRVQVSD
                     QLRRFSLFAGVDVDPVGVTAWSQPWVPMWLEWEVQLQSTDQLDGWRLAQVDLDSDSPA
                     QSGQVKTFAGRSPLHTGAAKTLAASIEQWLVAEEQRDKDNQGEVDAATADALQRIANG
                     IGFLDVLSATLDGLTDRLLGLPVDDFGVLRQRQSDGTVVPPTPVDVPQLLMSGALQLT
                     RARIVDAFGRTLDLPLANLHIPERDEITQPAEALALRPRLLRPARWLFRLVDPTLASI
                     TSSGNPAPEATIDQINPAQMINPVSGFFLPDHIDESLETFDTAGLPLGQLMHEPFGGG
                     VTWEIAPGRIGPADAGPSYGLDPKQAILGLIAAGMVAADAKRREGKPAQPETESALSA
                     FLRAVDTTLWTVDTFSQLGNENIAGLVGRPIVVVRATLRLDIADDLDDLTFTDDAQKA
                     ARQAAYQALADRAFPIRLGELTRSDDGLLGFFVDDDYSQFHVVDKVIRDGALDVGRGR
                     GQFAQLGSTLQIPPVKPITHPYIAAEDGLVVRPGQVVRLTLLMYPAGKVFLTSGILPR
                     KYLQLARDWVQPGLAVIAPSVRVGPVLVDPDKIRLPKVSSFPKDQIWTRRDTPNTWKD
                     DAILAATQEALFPEMPSDVQEGYIRIAPNQTGSGPA"
     gene            7950..>8372
                     /locus_tag="VLJ17_14905"
     CDS             7950..>8372
                     /locus_tag="VLJ17_14905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24303.1"
                     /translation="MRYNAATNGVLPEDAVSAARVARRLHTLAAPAIAPSGDLNLWVP
                     IGPSTVLQGQAGGNPRVTGRVRDLWVSPDGLRAYAGSANGGVWFSNDGGSTWSPLGNW
                     LATPAAADVSLPSTTLTCGCLLVNFGNQADGSADEIYVG"
BASE COUNT         1536 a         2564 c         2680 g         1592 t
ORIGIN      
        1 cgacggcatg ggatcgccga atgggaccgc cattcccatg ggcaccgaga gagtggcagt
       61 gttggcgctc gaccaacagc cggtcacgtc gaatggtttg tcgggctggc atgcgggaca
      121 ggagttggct tacgtgggtt ggtggtctgc gctggcctcg ggcgccgtgg tgcacgccga
      181 aggcgcacgg gtgcggagaa cggcacagcg cttccgggcg ggttggattc attccaccga
      241 gttcgtcacc ggaaccaaca tcgttgccac acgattcgtt agtccggtgc aggcggtggc
      301 ggtattgatc gacgatcccg cgagttccga tgcggcccgc ggtttagcgc tgaccctcga
      361 tggagccaat cgattgacgg atgcctccgg acaacccttg ccagccaccg tggtagtcat
      421 cgcaaatcgc agcgccttga tctatccgct cgcgccgcct ccctctccgg ctctgggacc
      481 agtgacggtg agcgtaggaa gccaggatgg gtggcatctg gcaggcgtaa tcgggggcaa
      541 cgagagcgtg gactccatgg ccaagcggat cgccgcgaac ggactggagg ctttgattgc
      601 accgattgtc gctacgggcc agggtctggt gcagctggca tggaaaccgc caagcacgcc
      661 cgtgggttca ccacggtcgg catcaggtaa ggccagcgca ccggtgcagc aggctgacac
      721 ccccggcaag aaaaagacga cgcagaaatc cagttcgcac aagcctgaaa ccaagcgcaa
      781 gaacgagacc cagagtaaga gtaagaagcg gagtccggct cgaccgaaga agggaaggtc
      841 ctagatcatg ccgcagccag gattttttgt cttgcatagt tcggcggtgc ccccgttaga
      901 ggcgggcgat tacaccctca ccggcaatca aacgttagcg ggcggggcga cccagccgta
      961 cgaagggcat gtgcgcgtca cttcgcctcg ctttcgaatg ccgccagacc agattctctc
     1021 aacctatccg ccggctaacg ctgagggttc gttcgaggcg cggctaccac aagtggtgct
     1081 gaaacggcgt acccttccgt gggagcgcgt gtccgacgcg ggcaatcgcg ccgtcccgtg
     1141 gctggcgctg gtcgtcatcg cggaaggtga gggacagatt tccggtgaga cgccagtgaa
     1201 ggattgcgtg actccgggag tgacgcttaa tggtcccaac gatgtggcca ccggcttcta
     1261 cctttcggtg agcgagactg tagtgaacaa agtcttcccc acgcacgatg atttggcatt
     1321 gctcacccat gtgcgcgaag tggacctgag cgataccgag ctggcgatgg gcgatgacga
     1381 cggttttctt gccattgtta tggccaaccg gttgccgcag tacgaccgca ttaactgcgt
     1441 gccggtgcgc tacatggctt gcctgatcaa cctcgaagga caactggaca cattgcccac
     1501 gccgctcgag ttcaccttca cctttgacgc catggcgtat gtgcaagacg ttcgtacgtt
     1561 tgccgctgca gcccatacct ccgcagacaa gtacgtcatg ggcagcggct tgaacgtggc
     1621 gttaagcccc agcgttccga atcctcaggt cgtgggcccc atccacccca aggcattgca
     1681 ggctggtgcg ccggcaacct tcgccgcgcc cgcagtcacc cctccgatcg cagagcgcgc
     1741 tccggtgtcg gcgagttgga gcacgaccca aaccaaagtg gccaacattg ccgcttcttc
     1801 cgcacccgcg gaggcgggac ggctggtgcg cgatgcgatg accgccggct tccgctttcc
     1861 ggtggacaaa atcgtactag agaaggttta tcgcttcccg gtgctggcgc attggtcgtt
     1921 cacctgtaca ggcgcgggat cgtttgagac cttgatgcaa ggcctcgacg tcggtctgct
     1981 gggaactctg cctgccgatc ccacgacaca acccaagccc gattgtgcgc caccgccgaa
     2041 gggcgacgct cctcctccaa ccgacccgcc tcggcccgcc gccgaggtga ccgataccgg
     2101 gcacgtgggc ttgcatcatc tcactcggcg cggcgactca ttgcgcgcct ggtaccgcgg
     2161 accgctcacg ctccatgtta ccgaacgctc gcaacctgac gcggatggac atcttcccct
     2221 cgcgaatgtc agcgaccagc tacggcgcgt cacccccgat ggacgtgaag atctgtcgct
     2281 ggcgggcgcg tttgagatcg gacgactgct ggctctctca caaccatccg tggtttccgc
     2341 gctgatgcgt tggcggcagg agcagttcgg cgcagagcgc gcgcgtcaac tggcagcgaa
     2401 gacgctcgaa aaactttcag cactgaagcc ggatcctgct gcctcgattc acgacttggg
     2461 acaactggtc ggcaagcagg ttgtgctgat ggcggcccag agcccggaaa agatgctggc
     2521 agtgaaccgc cccttggtcg atcccgggcg gccgctcgag tacctgacat ctgggatgga
     2581 acagatcatc gccgacggct ttggtttctc gctgccggcg gtgcagaggg gcgcgggaag
     2641 cgtcggtatc accgccgcgc tctcgcaggc ctccgtgccg aagtccgaca gcgttggctt
     2701 tgataccaat gccgccgcgc aattgaaaga tgggctgtca tccgccgtcg aaatggtgac
     2761 tgcaggcgcc gtgcaacgga cgccggcggg tggtggactg cgcgccgccg tacgaaccaa
     2821 ggccggcgaa gaacgggacg cactcgatga cctgctcgac caagcggccg agaagcagca
     2881 acgcggcaag gagagaaaat gaattccgca tttttcacaa gccaggttgt tttttcggcg
     2941 gtgaaggcgg cggtcatgca gattgtcgta accccgtcgg acaacgatcc ggatatgggt
     3001 gaccgcatcg tgccgctgga tctgcggcaa tggctggcgc gtctgcgatt gctcgactcg
     3061 gtgccgttcg cttatctgac gcccgacagt ctgttgctgc cgccggaatc gattcgtttc
     3121 ttctacgtag atcgcaactg gaccgatgcc ctgattcaag gcgcgctgag cgtgggtacg
     3181 gtcaactcct ccgaccgggc gcaactggag cagttgcacg ggcagatccg cgacgagatc
     3241 gatcaggaag agcgcgtggt gcgcgagcct ggcggtgaag cggttcagaa aggcccggcg
     3301 ggaaccatca ccggatttct gttgcggtcg cgcgcggtgt cgggctggcc cggcatgcac
     3361 gtgcgcgcct atcgcaagga acttggcaag gacaacgaga tcattcccga gtccagtccc
     3421 gaccgcatta aggttctgcg catggagcgc ctgtcgcccg ccgtgttgtt ggtgctcttc
     3481 gatggcgttc ccgtcatcgt gcatgtggag gagccccgct gcggcgtgca gttcggtatt
     3541 cgcctggaag cttccggggc cgcgaaccag ttcaacgcgt ttgtgattgc ccgtgatgcc
     3601 aacacctccg acgacgttcc gccgtcgccc cccggcacgc acgttccggt gacgtttcgc
     3661 agcggctcac ccggagtgct ggatctgaag cgcaccgcgc agtcgctcat caataccccg
     3721 ggcacacata tcggcccgaa cctggatggc gccgagtttg cgttggagat gattcgttat
     3781 ccctatcgac aggtttttgg cgatccttcg caaggtggcg tgggaaacat tcgcgatgtc
     3841 ttccgggtct cgatctcgat gacccagctg aaggcaaaat ttctggcaac gatttgacgg
     3901 ttacatgtgc gtcggggcgc gctcaactaa tggggggcag gataatggca aaccgctttg
     3961 atccggacac tgtgcgactg gcgatggtgt cgtcacgttg gaccggtcta gtgcgcctgg
     4021 acgcatcccc ggccgccata gcgcagtggg acccagactt gttgcgtgaa acccgagtcg
     4081 tggttccggt ggacttgcag gccatgtacg tgcctgtcgg ggacgcaaca ccatatgttc
     4141 gtttgccgtt cacattgacc accgtggatg gacagccacc cgcacccatg ccaccgccct
     4201 tcgcgccggg cgcggtacga ccggcgggcg tgtatcttca ctgggcgcct cccgatgctt
     4261 tgctgcgcgg caccctgcag gatgtcgacg atagttcgcg aaatcgcctg ggcctgccac
     4321 cgcttcccga tcgctgggtg gtgttgcgca tcgtcgcgcc gactggcgcc accaagccca
     4381 tcgttaccgg ttgggtgttg gaagccgata ccgcgaaagc tattctcctc gatcagtggc
     4441 cgacaggcag tgcagccgcg acccccgcgg gcaagaccgt cgaggccaaa cagctcaccg
     4501 gcaccgtcgg tggatcgacc gcgtgggtgg gcgtgttcga tgccgtactc aataggcttt
     4561 cgttctacga tccgttgacc gatctcgcgc aactcgcccc caacggcgtt gtggacgacc
     4621 tggctgcata catggtggcg ggctggtggt cagatgccaa gctcgatccg ctttatggcg
     4681 ccgaaacgga ttcaagtctg tcggtgcgcc tgacccagct gggatggaac ctgatgacgg
     4741 atcaggaggg tggcgacaag gtcgagggct cgcgcaaaat tcagacggcg ctgcgtgaca
     4801 gcctcggtct gaaaaccgcg gcgcgatacg gttcgctcgc agccgaccaa gtttcgagga
     4861 cggccgtcga gcccttgttg caagaaaccg ctacgccact gcggatgtat tctccggccg
     4921 tcgcttctct ggtctccaat gcggccaacg taatcgccag cgagcccaag tggccacggt
     4981 tggcgttgtt gcacggcagc gtgcatggcg ttccggtgaa aggaccggtg gtcatcgacc
     5041 agataccgcc agccgacggg gtggacctgg cgttaggaca tcacaatgac gatgtggcat
     5101 cggcgctcgc ggctgccggc tcaggcgtcg tttcgccgga cgaccggcgc gacctcgaac
     5161 gccttctctc ggcgttcacc gcacagattc tgccggagct cggaacgtct gacggcgctg
     5221 tcgagacgga tgagcacgag cacgacgccg gattttcttc tttgccgggt gggccgggtg
     5281 ccgtggatcg cttgcgcaaa ggcgcggagt caggaccgct ttcggcgggg cgcgccgccc
     5341 gcagccagat ggcacgcgtc ggtatggcaa gtgttctgga gcgcggcgta actctcagca
     5401 aacttgcact caaacgtgtc gatctggtgt cgggtacggt gcaggaccag cggctcgcga
     5461 tggcgctgtt tactgcaagc aaccctccca tcacccaacc tacggtggag gtgcaggaag
     5521 ttcgccgtcc cgcgcctcgc tactacgtcc cgctcgatcc ccttattgcc gtgcgcaatg
     5581 ccaagcgcag cctgcgctat ggcggcgacg gccgtacctc gcccgatcag cgattgcagt
     5641 gccggtggcc atcgcagatt ccgacccagg ctcaggggct gatcgacggc cgcgattacg
     5701 ttgatgccct gcccagcggc ggcatccccg acgaggttct caccctggtg cgcaacacgg
     5761 tcgtgcagga cccgtacttt gtaccgtggc ttgcgcaggt ggaagcgaac cgtcgcaacc
     5821 tggacaagac actcaccatg aatcggctgg ccgccgaatc ggcgatccgc ttcggagcga
     5881 acggtgttta cgacggcacg acgacagctt tccagcaggc ggcgtttcaa ggcgcgaacc
     5941 ttacggttgg gcagccatcg tcgtttgttc agcgggtaca ggtttcggat cagttgcggc
     6001 gattttcgtt gtttgccgga gtcgacgtcg acccggtcgg agtgacggct tggtcacagc
     6061 catgggtgcc gatgtggctc gagtgggagg tgcagctgca atcgaccgac cagctggacg
     6121 gttggcggct cgcgcaagtg gacctggact cggacagtcc cgcacagtcc ggccaggtta
     6181 aaacttttgc cggtcgcagc ccgctgcata ccggcgctgc gaagacgttg gccgcctcca
     6241 tcgagcaatg gcttgtcgcg gaggagcagc gcgacaagga caaccagggc gaggttgacg
     6301 cggctaccgc tgacgccctg caaagaatcg ccaatggcat cgggttcctc gacgttcttt
     6361 cagcgacgct cgatggcttg accgaccgcc ttctcgggct gccggtggat gacttcggcg
     6421 tgctgcggca gcggcaatcc gatggaaccg tcgttccgcc cactccggtt gatgtaccgc
     6481 agcttctgat gagcggtgcg ctgcagctga cgcgcgcccg catcgtggat gctttcgggc
     6541 gcacgctcga tttaccgctc gccaatctgc atatcccgga acgagatgag atcacgcaac
     6601 ccgcggaagc cctggcgttg cgaccccgat tgctgcggcc tgcgcgatgg ctgttccggt
     6661 tagtcgatcc cacgctcgca tcgattacca gcagcggcaa tccggcgccg gaagcgacga
     6721 tcgaccaaat caatcctgct cagatgatca atccggtctc aggtttcttc ttgcccgatc
     6781 acatcgatga atcgttggag accttcgaca ccgccggctt gccgctcgga cagttaatgc
     6841 acgagccgtt tggcggcggc gtgacctggg agatcgctcc tggtcgaatc gggcccgccg
     6901 atgccggacc gagttacgga ctcgatccca agcaagccat cctcgggctg attgccgccg
     6961 gcatggtggc ggccgacgcc aagcggcgcg aaggaaagcc ggcacagcca gaaacggaat
     7021 cggccctgtc cgcgtttctg cgagcggtgg acacgacgtt gtggaccgtc gacacgtttt
     7081 cacagctggg caatgaaaat atcgccggcc tggtcgggcg gccaatcgtt gtggtgcggg
     7141 cgacgctgcg tttagacatc gccgatgact tagacgatct cactttcacc gacgacgcgc
     7201 agaaagcggc acgacaggcg gcctatcagg ctctggccga tcgtgcattt cccattcgtc
     7261 taggcgaatt gacgcgcagc gacgacggac tcctaggctt cttcgtggat gacgactact
     7321 cgcaattcca cgtagtggac aaagtcattc gcgacggtgc gctcgatgtc ggccgcggac
     7381 gcggacagtt cgcgcaactg ggctcgacgt tgcagatccc gccggtcaaa ccgatcacac
     7441 acccttacat cgccgcagaa gacgggcttg tggttcgtcc cggtcaggtg gtgcggttga
     7501 cgctcctgat gtatcccgcc ggcaaggtgt ttctgacatc aggaatcttg ccgcgcaaat
     7561 atctgcagct cgcgagggac tgggtgcaac cgggactcgc ggtcattgct ccttcggtgc
     7621 gagtcgggcc ggtgctggtc gatcccgaca aaattcgtct gcccaaggtt tcgtccttcc
     7681 cgaaggacca gatctggacg cgacgcgaca cgccgaacac atggaaagac gatgccattc
     7741 tggcggcgac gcaggaggcg ctgttcccgg agatgccgtc ggacgtccag gaaggctaca
     7801 tacggattgc cccgaatcag acgggcagtg gacctgcgtg atcgcttgtg cgattgtgaa
     7861 gcttgcggca gaaagaggaa ctagaaacca acatggcgcg ttatctgtgg cccagaactc
     7921 gtaaaagcgg agacagtccg caagcccgca tgcgttacaa cgcggccacc aacggtgtgt
     7981 tgccggagga cgcggtgtcg gcggcgcggg ttgcgcgcag actgcacacc ttggccgctc
     8041 cggcgatcgc accttccgga gatctgaacc tgtgggtgcc gatcggccct tcgacggtgc
     8101 tgcaagggca agcgggagga aatccgcgcg tcaccggcag ggtgcgcgac ctgtgggtga
     8161 gccctgacgg cttgcgtgcc tatgcgggat cggcaaatgg aggagtctgg ttcagcaatg
     8221 atggtggcag cacctggtcg ccgttaggaa attggctggc tactccggcc gcagccgacg
     8281 tcagcctacc gtccaccact ctaacctgcg gatgcctgct ggtgaatttt ggcaatcagg
     8341 ccgatggctc ggctgacgaa atctacgttg gc
//
LOCUS       DATILV010000632         5262 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3988639, whole genome shotgun sequence.
ACCESSION   DATILV010000632 DATILV010000000
VERSION     DATILV010000632.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5262)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5262)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5262
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3988639"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..3457
                     /locus_tag="VLJ17_14910"
     CDS             <1..3457
                     /locus_tag="VLJ17_14910"
                     /inference="COORDINATES: protein motif:HMM:TIGR02353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904091 - non-ribosomal peptide synthetase
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Pls/PosA family non-ribosomal peptide
                     synthetase"
                     /protein_id="HSV24304.1"
                     /translation="TAYGITEDDRVYQGFSVAFDAAVEEVWAAFSLGGTLFVPADDVS
                     RSPQDVAAFIAQNRITYFSTVPSFLAMITDPLPTVRLLILGGEALPAELVARFAEGRR
                     MLNTYGPTEATVVATLSQVHPGQPVTIGTALPRYQTYVLDENMRELEPGQEGELYIGG
                     GAVARGYMNRPELTAEKFVNNPFRASQRLYRSHDLVRQRADGEIEFLGRIDGQIKIRG
                     FRVELSEIEAVLMELPGVRNAAVATFDFNGFMELGAFVVAHEAGAELDRAATAEHLRA
                     KLPPYMVPKFLDMIEELPRMTSGKIDRKQLPRPVKLLSASTSDAIVAPRNETERLVCE
                     AWAEALNNTRISVTDDFFLALGGHSLVAAQAVTGMRAKLGHEQISVRDLYAHRTVEKL
                     AIHLAKMRVIPGQTKSQELPPSQKSPSQVAFESVPWWERAACYVLQAISLAVYYAAIG
                     LPPAIVIYTILSILEDGILRVDIAIRTLVIAGFLLWPFYMGLGIGVKWLVLGRFRAGR
                     VPLWSIAYWRFWVVRLFSGLTGANFFRGTPLMNLYFRAMGAKVGANALISTLHCVAFD
                     LISIGEGASIGAETQLLGYRVEDGMLVLGRVDIGNDCFVGMHCALGLDVAMEEGSRLD
                     DLSLLTDGTRMRAGECRRGVPAEPAQVDVPRASSGEKVPRRPFLFGLCHLALIYVMGY
                     VAIFSIVPSVHLIARALEAGVLWGIAATFAGVCLSILVYAVFVIGIKWFFGREKAGTF
                     PLHSGEYLIHWTFDGLLAGLNSILMPVYATIYMPTLLRLLGAKVGKHAEVSTVLHISP
                     DLLEVGDGSFLADACVVGGKRVHNGLLEVKANKIGARSFVGNSALVPGGIDIGNDCLI
                     GVQSTPPVATSCTPDGTRWLGSPGFELPSTQGFTCFKAEETYKPTPALYRTRAIIDAM
                     RILLPMLLVAAGTIGFAGLTILARMHLPLWAALMSVPLISMLLAWAAIMLAAGVKDAV
                     LGPFEPTVKPLWCKFIWLNELVNGIYESTAAPAMQPLLGTPFVVWGLRQMGCRIGRHV
                     FMDTTLFSEFDLAQIGDYAAINYGATIQTHLFEDRILKAGRLEIGNGATVGNMAIVLY
                     DTKMGFGSYLAALSVLMKGETLPPLSRWYGVPTQQMPDPCAADSAAQVEATARPSGMM
                     ADCAA"
     gene            3684..4448
                     /gene="bcsS"
                     /locus_tag="VLJ17_14915"
     CDS             3684..4448
                     /gene="bcsS"
                     /locus_tag="VLJ17_14915"
                     /inference="COORDINATES: protein motif:HMM:NF028346.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsS"
                     /protein_id="HSV24305.1"
                     /translation="MKRFTGSVLLSAIVLASSPVLAADMAVKANGNDNEPVEHWLTFT
                     GIDVNSGGSFFGFGGFQFAPGKGGLDESGLRFWFLGGGGRYRYPANNETIHGTFWDTD
                     ALVGYSIERDNGSLAFYGGLNFQSHRLSTPDPENPVQGDKVGAKFQVNAWYNPTPITL
                     LYGEGSYSTAFQTYYATGKYGYSFTGGKTLEDKQFYIGPQITLLGNERYQEWRIGAHV
                     TSLNLGKVDFEIGAGFQHNTDNGSGAYALFELNTKF"
     gene            complement(4503..>5262)
                     /locus_tag="VLJ17_14920"
     CDS             complement(4503..>5262)
                     /locus_tag="VLJ17_14920"
                     /inference="COORDINATES: protein motif:HMM:NF014430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSV24306.1"
                     /translation="KLDSEISDIIGLTGQRMIEAIIAGETNPATLAALADRRIKAPPE
                     QLREALHGRVMPHHRFLLRLHLQQINALDTAIGEIDGAVNERIAPFRTGVELLITSPG
                     ISELSAQTILAEIGTDMSRFPTAAHFLSWACMCPKNDESAGKRRSTRMRKGAPWLKST
                     AVQCAWAAVKKKGSYLQAQFYHIKARRGPKRAIMAVVASILTAIYHMLKDGTMYKDLG
                     CNHFDRRSADQQKNRLVKRLADLGYAVEIKPLTA"
BASE COUNT          948 a         1529 c         1639 g         1146 t
ORIGIN      
        1 gaccgcctac gggattacgg aggatgaccg cgtttaccag ggcttttcgg tcgctttcga
       61 cgcggccgtc gaggaggtgt gggctgcgtt ttcgctcggt ggcacactgt tcgtgccggc
      121 cgacgacgtg tcgcgttcgc cccaggacgt ggctgccttc attgcgcaga atcggatcac
      181 ctatttctca actgtcccca gcttcctggc gatgatcaca gatccgctgc cgaccgtgcg
      241 gctcttgatc cttggcggcg aagcgttgcc ggccgaactg gtggcgcgtt ttgccgaagg
      301 gcggcgcatg ctcaatactt atgggccaac ggaagcgacc gttgtcgcga ctttgagcca
      361 ggtacaccct ggccagccag tgacgatcgg caccgccctc ccgcgctatc agacctacgt
      421 gcttgatgag aacatgcgtg agcttgagcc cggacaggag ggcgagcttt acattggcgg
      481 tggcgcggtc gcacgcggct acatgaatcg gccagagctc acggcggaga aattcgtcaa
      541 caatccgttc cgagcctcac agcggctcta tcgctcccac gacctggtgc gtcagcgcgc
      601 cgacggtgag atcgaatttt tgggccgtat cgacgggcag atcaagatac gcggtttccg
      661 ggtggaattg agcgagatcg aggcggtcct gatggagctg ccgggcgttc gcaacgccgc
      721 ggttgccacc ttcgacttca acgggtttat ggagcttggg gccttcgtgg tcgcgcacga
      781 ggctggcgcc gaactcgacc gcgccgccac cgccgagcat ctgcgcgcca aacttccgcc
      841 ctacatggta ccgaagttcc tcgacatgat cgaggaactg ccgcgcatga ccagcggtaa
      901 aatcgatcgc aagcaactgc cgcgccccgt caaactgctg tcggcatcga cctctgatgc
      961 tatcgtggcg ccccgcaatg agaccgagcg gctcgtctgc gaggcatggg ctgaggcgct
     1021 caacaatacc cgcatttcgg tgaccgacga cttctttctc gcccttggcg gccattcgct
     1081 ggttgcggcg caggccgtga cggggatgcg ggcgaagctc ggacacgagc agatatcggt
     1141 gcgagatctt tatgcgcatc gcaccgtgga aaagctcgcg atccatctcg caaaaatgcg
     1201 ggtgatcccc gggcagacca aatcgcagga gctgccacca tcgcaaaagt caccgagcca
     1261 ggtggcattc gagagcgtgc cctggtggga acgcgctgca tgctatgtgc tgcaggcgat
     1321 ttcgcttgcg gtctactacg ccgctatcgg gttgccgccc gccattgtga tctacaccat
     1381 cctgtccatc ctggaggacg gcattctccg cgtcgatatt gccatccgta cactggtcat
     1441 tgccgggttt ctgctgtggc cgttctacat gggcctcggc atcggggtaa agtggcttgt
     1501 cctcggtcgg ttccgggctg ggcgggttcc gctatggagc atcgcctatt ggcgcttctg
     1561 ggtcgtgcgg ctgttttcgg gcttgacggg ggcgaacttc tttcgcggca cgccgctgat
     1621 gaacctctat ttccgagcga tgggcgccaa ggtgggggcg aatgcgctta tctcgacgct
     1681 ccattgcgtc gcgtttgacc tcatctcgat tggcgagggt gcgagcatcg gtgcggaaac
     1741 ccaactgctt ggctaccggg tcgaagatgg catgctggtg ctcgggcgcg tcgatatcgg
     1801 caatgattgc ttcgtcggca tgcactgtgc acttggcctc gacgtcgcga tggaagaagg
     1861 ctcaaggctc gatgacctct cgctgctgac cgatggcacg cggatgagag ccggcgagtg
     1921 ccgccgcggc gttccggccg agccagcgca ggtggacgtg ccccgagcct caagcggcga
     1981 gaaagttccg cggcggccat tcctgttcgg actctgccat ctggcgctca tctatgtgat
     2041 gggctacgtg gcaatctttt cgatcgtgcc gagcgtccat ctcatcgccc gtgcgctcga
     2101 agccggagtg ctatggggaa tcgcggcaac ctttgcgggc gtttgccttt cgatcctcgt
     2161 ctacgccgtg ttcgtgatcg gcatcaagtg gttcttcggc cgggagaagg ccggcacgtt
     2221 tccgctgcac agcggcgaat atctcataca ctggaccttc gacgggctcc tggccggcct
     2281 caacagcatt ctgatgccgg tctatgcgac gatctatatg ccgacgctgc tgcgcctgct
     2341 tggcgcgaag gtcggcaagc atgccgaagt atcgaccgtc ttgcacatct cgccggactt
     2401 gcttgaggtt ggcgatggca gctttctggc cgacgcctgc gtggttggag gaaagcgcgt
     2461 gcacaatggt ctgctcgagg tgaaagccaa caagatcggt gcccgctcct tcgtcggtaa
     2521 cagcgctctg gtgccagggg gcatcgacat cggtaatgat tgcttgatcg gcgtgcaatc
     2581 gactccgccg gtcgcgacct catgcacgcc tgatggaacc cgttggctcg gctctcctgg
     2641 tttcgaattg ccaagcacgc agggctttac ctgcttcaag gcggaggaaa cctataagcc
     2701 gacgccagcg ctctaccgga cgcgcgcgat aatcgacgcc atgcgcatcc tgctgcccat
     2761 gctgctggtc gcagccggca cgatcggctt cgccggcctg acgattctcg ctcggatgca
     2821 tctgccgtta tgggcggcgc tcatgagcgt tccgctcatc agcatgctgc tggcgtgggc
     2881 tgcgatcatg ttggcggctg gtgtcaagga tgcggtactg ggtcccttcg aaccgacagt
     2941 aaagccgctg tggtgcaagt tcatttggct caatgagctc gtcaacggga tatacgagag
     3001 caccgcagca ccagcgatgc agccactgct cggcacaccg tttgtcgtgt ggggtctgcg
     3061 ccagatgggg tgccggatcg gccggcacgt gttcatggac accacgctat tctccgagtt
     3121 cgaccttgcg cagatcggcg actatgcggc tatcaattac ggcgcgacca tccagaccca
     3181 tttattcgag gaccgtatct tgaaggctgg ccggcttgag attggcaatg gtgccaccgt
     3241 cggcaacatg gcaattgtac tttatgacac caagatgggg tttggctcct accttgccgc
     3301 gctctccgtt ctcatgaagg gcgagacgct tccgccgctt tcgcgctggt atggcgtccc
     3361 gacccagcag atgcccgacc cctgcgcggc agacagcgca gcacaggtcg aggcaaccgc
     3421 tcggcccagt gggatgatgg ccgattgcgc ggcgtgagat ttccagcagc ctctcaggtc
     3481 ttcggtgcaa ctaacgcttt cagctatgct tttgccggtg tggctgctcc gcaacacacc
     3541 ggcaaaaatt cagctttttg atggatctag ctggcgatgg gattctccgc agagtatttt
     3601 agtactgccg gcagctgccg cgttgctttg attaccagat cttatttagc ccgcgtgttg
     3661 tgcacgtagt ccaggggggc ggaatgaagc ggttcacggg atcagtcctg ctgtcggcaa
     3721 tcgtcctggc cagctctccg gttttggccg ccgacatggc cgttaaggct aacggtaacg
     3781 ataacgagcc ggttgagcat tggctcacct ttaccggcat tgatgtgaac tccggcggca
     3841 gcttctttgg gttcggcggc ttccagttcg cgcccgggaa aggcgggttg gacgagtcgg
     3901 gcctacggtt ttggtttctt ggcggcgggg gccggtatcg ttacccggcc aataacgaga
     3961 cgatccacgg gaccttctgg gacacggacg ctctggttgg ctacagcatc gaacgcgaca
     4021 acggcagcct tgctttctac ggggggctaa actttcaatc ccaccgactc tcgacgcccg
     4081 acccagaaaa tcctgttcag ggagacaagg tgggggccaa gtttcaagtt aacgcttggt
     4141 acaatcccac accaataaca ttgctttatg gcgaaggctc atattcgact gcgttccaga
     4201 cctattatgc aaccgggaaa tacggctaca gcttcaccgg cgggaagacg ttagaagaca
     4261 agcagttcta catcggcccg cagatcacgc tgttgggcaa cgaacgttat caggaatggc
     4321 gaattggcgc ccatgtgacc tctttaaacc tggggaaagt ggatttcgaa attggggctg
     4381 gtttccagca caacaccgac aatgggtccg gcgcgtatgc cctcttcgaa ttaaacacca
     4441 aattctaacg cggctctgcc tagcaggaaa ctcacttgct tggaccgtac cacaaacacg
     4501 gttcaggcgg tgagcggctt gatctccaca gcgtagccaa ggtcggccaa gcgtttgact
     4561 aggcgatttt tttgttggtc ggcggaacgg cgatcgaaat gattgcagcc aaggtccttg
     4621 tacatcgttc cgtccttgag catgtgatag atggcggtca ggatggaggc aacgacggcc
     4681 atgatcgccc tcttggggcc gcgccgggct ttgatgtgat agaattgggc ctgcaggtag
     4741 ctgcctttct tttttaccgc cgcccaggca cattggacgg cggtgctctt gagccaagga
     4801 gccccctttc gcatgcgggt cgaccgccgc ttgccggcgc tctcatcatt tttggggcac
     4861 atacaggccc aagagagaaa atgcgctgcg gtgggaaatc ggctcatgtc ggtgccgatt
     4921 tcggcgagaa tcgtttgggc gctgagctcg cttattccag ggctggtgat tagcaattcg
     4981 acgccggtgc gaaagggcgc gatgcgctcg ttgaccgccc cgtcaatctc gccgatggcg
     5041 gtatcgaggg cgttgatctg ctggaggtgc agccgcagga gaaagcggtg atgcggcatg
     5101 acccggccgt gcaaggcttc gcgcagctgt tccggtggcg ccttgatgcg ccggtccgca
     5161 agagcagcga gcgttgcggg attggtctcg cccgcaatga tggcctcgat catcctttga
     5221 ccggttaacc cgatgatgtc ggagatctcg gagtcgagct tg
//
LOCUS       DATILV010000633         7336 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3472146, whole genome shotgun sequence.
ACCESSION   DATILV010000633 DATILV010000000
VERSION     DATILV010000633.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7336)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7336)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7336
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3472146"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            274..945
                     /locus_tag="VLJ17_14925"
     CDS             274..945
                     /locus_tag="VLJ17_14925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24307.1"
                     /translation="MLPNLKILICGAVFAPLLFAVTGAGVVLPDSYTRVGEMPEIGRP
                     MMQRMIADEPAQTQFYIMTVARRSEELERLRELAVLEVIPAVAPAQPDLDLVKPAVIE
                     NPVSDSILATDVMAPTPQPTGAMGIVSETAAGSVHLRPAEIRAEAPDDTDLMQVAALL
                     PTPADDLSGRAPVLLKVPLPPLRPTARTGGIHRRVLQRKPWAAPAPSDTLSQSLLLRS
                     PTLPR"
     gene            1111..1260
                     /locus_tag="VLJ17_14930"
     CDS             1111..1260
                     /locus_tag="VLJ17_14930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24308.1"
                     /translation="MVRHADHHDQLNMVLRTNRAVVLALLWGALAGCVISSLVYDIAD
                     WIGAW"
     gene            complement(1267..2232)
                     /locus_tag="VLJ17_14935"
     CDS             complement(1267..2232)
                     /locus_tag="VLJ17_14935"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV24309.1"
                     /translation="MLLKRKCPVIAIEEHYWDAELASHFTGLEAGRPGELQRRLDDLG
                     TLRIKEMDDAGIDIQVLSHGAPSAQKIPAEIAVELVRGVNDRLHRAITAHPTRFAGFA
                     ALPTADPKAAADELERCITKLGFKGAMIHGLAHGKFVDDRQFWPIYARAEALDVPIYL
                     HPSLPHAGVTEAYYADYAQQFPMVVRPAWGYTVETATTAIRMVLSGVFEAHPGLKIIL
                     GHLGETLPFLVWRIDQALARPGQKSLSFRDIFCNNFYITTSGNFSTPALLCCIMEMGI
                     DRILFAADWPFVENAPATQWMATTPICDEDKAKILSGNAERVLRI"
     gene            complement(2410..2706)
                     /locus_tag="VLJ17_14940"
     CDS             complement(2410..2706)
                     /locus_tag="VLJ17_14940"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HSV24310.1"
                     /translation="MLSGLIDRRKSERVPVRTPAKIILPQSNAPFDCIATNVSDGGAM
                     LHFRGSELPDVFVLHFNDSGRQRQCRVVWRRGAEVGVAFTDRTQVNFGRRIAAR"
     gene            2866..3279
                     /locus_tag="VLJ17_14945"
     CDS             2866..3279
                     /locus_tag="VLJ17_14945"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSV24311.1"
                     /translation="MHVFSLMQEQEWNPKRHVEKVLGRIGQGDVAVACWEPGQISPYH
                     CHPHATEIYLCFEGGGKMRTPSATIDVVPGAFVVHPAGEVHEYANGLHRTLLFRVRYG
                     GDMTARHAEWRGNPSWIQSDADADYYRHHPVGGSG"
     gene            3410..3751
                     /locus_tag="VLJ17_14950"
     CDS             3410..3751
                     /locus_tag="VLJ17_14950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018426474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF952 domain-containing protein"
                     /protein_id="HSV24312.1"
                     /translation="MTTIYKVCETAQWNVAQREGEFRGSAVDFADGYIHFSTAAQVAD
                     TAGKHFAGMWDLVLVAVKAEELGDALKWETSRRGAVFPHLYGTLPLTAVRWVKPLRLD
                     DDGRHVLPPLE"
     gene            4017..4370
                     /locus_tag="VLJ17_14955"
     CDS             4017..4370
                     /locus_tag="VLJ17_14955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008130240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24313.1"
                     /translation="MNARRNMMRRGAAAVVMLTSAQGAWAQEKINLFRIVTVKDEIVI
                     GLNADELNALGGNDAGAVARALAQKGDLTAWQYRVRRGANGELEQAPTAKIGRANSSL
                     RVQPYTTPYAIVPHE"
     gene            4467..5168
                     /locus_tag="VLJ17_14960"
     CDS             4467..5168
                     /locus_tag="VLJ17_14960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018430629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSV24314.1"
                     /translation="MDYQGRTVVITGGTGGLGTAVVAALLDAGATCHIPYLVEAEAHA
                     FVHRDDARVKLYPQINLTDEDAVGRFYQQVPDLWASIHLAGGFAAGNIGTAGKSVLAN
                     QLDMNIVTCYLCCRSAVQAMAANSTGGRIVNVAARPALEWRGGAGMVAYTASKAAVAA
                     LTVALAEEVARDAILVNAVAPSILDTPANRKAMPKADHAVWPKVEDVAQTILFLASPA
                     NKVTRSAVVPVYGRV"
     gene            complement(5169..6590)
                     /locus_tag="VLJ17_14965"
     CDS             complement(5169..6590)
                     /locus_tag="VLJ17_14965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-CoA decarboxylase"
                     /protein_id="HSV24315.1"
                     /translation="MNTSFFGELLQTISERGRSLLDRARERRDSPAETTENLADLCEE
                     LLSNRGEASGVALAREILARYADLTIGPRIAFFEALATRFGADRARIETAMEAWQTKP
                     SDVAVAELHAATEPRRLELLRRLNLAPQGTSALVEMRGQLIDTLARRDDLTTVDTDFT
                     HLFSSWFNRGFLVLRRIDWSTPAVILEKIIRYEAVHQIRDWVDLRARIDSPDRCCYAF
                     FHPALVDEPLIFVEVALTRDIPGAISPILEIKREPLDPERANTAVFYSISNCQRGLAG
                     VTFGSFLIKQVVAEISREMPRLSTFVTLSPVPNFAGWLARQRTQPSPTLAEADRAALA
                     GLDQTDWWNDATALDDMRDAMLRAAATYFMTARNAGGSPLDAVARFHLGNGARLERLN
                     WPADLSDRGRRQSYGLMVNYLYDLGDIEKNHEAYADNRTIIATNTIRKLARPSRALAA
                     IEVASYVESFVGEAKRSPSTPAN"
     gene            complement(6604..>7336)
                     /locus_tag="VLJ17_14970"
     CDS             complement(6604..>7336)
                     /locus_tag="VLJ17_14970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HSV24316.1"
                     /translation="VAAQKRTGVMSELLRPDELTLRDRFDLLPRVLPFVILLTGVMIA
                     LYGGYATPSETAGLGAVLALLLIASIYGVWRAGDLAPILTATLRESTMLMFIIGMSLL
                     YSYVMSYLHISQSTAEWIVSLDLARWVLLTAILLMVVVLGFFLPPVSIILMTAPIILP
                     PLKAAHFDLIWFGVIMTIVMELGLIHPPVGLNIFVIKSIAPDIPLRDVIWGVMPFVAL
                     MIFAVIVLCIFPEIATWLANAVMGA"
BASE COUNT         1452 a         2187 c         2279 g         1418 t
ORIGIN      
        1 ctagctctaa ccattgagct acgggccccg cgcgtgttct tagcccattt tttgagaatg
       61 tggagggccg aatactggca tccgctcggg cgccgctcgt gctgcggtaa cattcgcccc
      121 gcttagctat gacgtcgtaa ggaccgcatc ggacagaaaa atcttgcggc tacgattcac
      181 ggggccgcgc aactctgtta agcatgggcg attcgcatac gcgttggtga ttcgtgcatc
      241 aagcagtggc ttcatgccca caacggtctg catatgctgc ccaatttgaa aatcctgatc
      301 tgcggggcgg tattcgcccc tctcctgttt gccgtcaccg gggccggggt agtgctgccg
      361 gattcctata cccgcgtcgg cgaaatgccg gagatcggcc gccccatgat gcaacggatg
      421 atcgcggacg agccggccca gacgcagttc tacattatga cggtcgcgcg ccgcagcgag
      481 gaactcgaac ggttgcgaga gcttgctgta ctcgaagtca ttcccgcggt cgcgcctgcg
      541 cagcctgacc tcgatctcgt gaagccagcc gtcattgaaa atccggtttc cgacagcatt
      601 ttagccaccg atgtgatggc gccaaccccg cagcccactg gagccatggg aatcgtgtcg
      661 gaaaccgcgg ctggttccgt tcatctccgc cccgcggaaa tcagggccga ggcaccggac
      721 gacacagatc tgatgcaggt cgctgcgcta ttgccaacgc cagcggatga cctgtcaggg
      781 cgcgcgccag tcctactgaa ggtccccctt ccacccttgc gcccgaccgc caggaccggt
      841 ggcattcaca ggcgagttct ccagcggaag ccttgggccg cgccggcgcc atctgatacc
      901 ctctcccaaa gtctgcttct gcggtccccg acactacccc ggtagcgaaa tatcaaaaga
      961 tcgtcgatca gagcggaatt gtgcgttccg agatgtgacg tcaccgcaac ccagccttgc
     1021 gttgctgaag cgttgcccat cctcaattcg gcaacaaata tgcgttccaa gcgttgtcta
     1081 tgaacgactg gcccatcaat gggggatgcc gtggttcgtc acgccgacca tcatgaccag
     1141 ctcaacatgg tgcttcgcac caaccgggct gtggtgctgg ccctgttgtg gggggcacta
     1201 gccggctgcg taatcagttc gctcgtgtat gacattgcgg attggattgg cgcctggtga
     1261 cacttttcat atgcgtaaca cgcgctcggc attcccgctg aggatctttg ccttgtcttc
     1321 atcgcagatc ggtgtcgtcg ccatccactg ggtggcaggc gcattttcta cgaacggcca
     1381 gtcggccgcg aacaggatgc gatcaattcc catttccatg atgcagcaca acaacgctgg
     1441 agtggaaaaa ttgccgctgg tggtgatgta gaagttattg cagaaaatgt cgcggaaact
     1501 cagcgatttc tgtcccggcc gtgccagcgc ctgatcgatg cgccagacca gaaatggcag
     1561 tgtttcgcca agatgtccga gaatgatctt gaggcccggg tgggcttcaa agaccccgct
     1621 gagcaccatt cggatcgcgg tggtcgccgt ctcgacggtg tagccccaag cgggccgcac
     1681 caccatgggg aattgctggg catagtcggc gtaataggcc tccgtcacgc cggcatgcgg
     1741 cagggatgga tgcagataga tgggcacatc gagcgcctcg gcgcgtgcgt agattggcca
     1801 gaattgccgg tcgtcgacga atttgccgtg ggcaaggccg tgaatcatcg cacccttgaa
     1861 accgagctta gtgatgcagc gctccagctc atcggcggcc gccttggggt cggcggtggg
     1921 caacgccgca aagcccgcga atcgcgtcgg atgggccgtg atcgcccggt gcagccggtc
     1981 gttgacgccc cggaccaact cgaccgcgat ttcggccggg attttctggg cggacggcgc
     2041 accgtgggac aacacctgga tgtcgatgcc ggcgtcgtcc atttccttga tgcgaagagt
     2101 gccgaggtcg tcaagacgcc gctgcagttc cccgggccgg ccggcttcaa ggccggtgaa
     2161 atgcgacgcc aactcggcat cccaataatg ctcctcgatc gcgatgacag gacatttccg
     2221 tttgagcaac attcgcgttt cccctgctcc catttgcctt ggcgctttta gtccctccta
     2281 tcaatggtga acggctcctc gtcaaggccg cagctacctc caacccttca cccgcgggcc
     2341 tgacccgctg gtccatcttt ttcgcaagag gatggatgcc gggtcacaac cccggcaaag
     2401 acgtgaatat cagcgggctg cgatgcggcg gccgaagttc acctgggtgc ggtccgtgaa
     2461 tgcgacgccg acctcagcgc ctcggcgcca cactacacgg cactggcgct gccggccgct
     2521 gtcattgaag tgcaacacga agacgtcggg caattccgag ccgcgaaaat gcagcatggc
     2581 gccgccgtcg gaaacattgg tggcgatgca atcgaacgga gcattcgatt gcggcaatat
     2641 gatcttggcg ggggtccgaa ccgggacgcg ttcggacttt cttcgatcga tgaggcctga
     2701 cagcatagcg tgattactgt atgttcgtac tggggttgct gtgtgctgct atagactgat
     2761 tgttttgacg atttgactgc gaactgcatt gaatgcaggg cgtgttttcg ctgctttatc
     2821 gacagatttg agacaattcg attcgaaccg cagaggaggg cttgcgtgca cgttttcagt
     2881 ctgatgcagg aacaggagtg gaacccaaag cgccacgtcg aaaaggttct cggccgcatc
     2941 gggcaaggcg acgtcgcggt agcctgctgg gaacccggcc agatcagccc ttatcattgc
     3001 caccctcacg ctacggagat ttatttgtgt tttgaggggg gcggcaaaat gcgcacaccg
     3061 tccgcaacga tcgacgtcgt gccgggcgcg ttcgtggtgc atccggccgg tgaggtgcat
     3121 gaatatgcca acgggctgca ccgcaccctg ctgtttcgcg tccgctacgg cggcgacatg
     3181 acggcgcgcc acgcggaatg gcgaggcaat ccgagctgga tacaatcgga cgcggatgcc
     3241 gattactacc gccatcatcc ggtcggcggg tcaggttaaa gtccacgctc agagcggttc
     3301 ccgatatgat tgatcaggat caccttcgtc atgccggcgc tcgtcacagg catccacgtc
     3361 tttcttgcgg ccccgtggca agcccggcca cgactcggtg gaactgccca tgacgacaat
     3421 ctacaaagtt tgcgagaccg cacagtggaa tgtggcccag cgcgaaggcg agttccgtgg
     3481 ctcggcggtc gattttgccg atggttatat ccatttctcc actgccgccc aggttgccga
     3541 cacggcggga aaacatttcg ccggcatgtg ggacctcgtc ctggtcgcgg ttaaggcgga
     3601 ggaattgggc gatgcgctga aatgggaaac atcgcgcagg ggcgcagtgt ttccccatct
     3661 ctacggtacg ctgccgctga cggcggtccg ctgggtgaag ccactgcggc tcgacgatga
     3721 cggacggcac gtgctgccgc cgctggagtg agttatatta tttgatagct tttgatattt
     3781 ttctgtggcg catcgtccct ccgtgatatt gagttgccta ccttccgcgc gaaggcggct
     3841 gttgagttga gtctataagc cccaggtcgc gtgcgcggcg tgttattgcg tagaaccatt
     3901 tgggccgctc ggcgcaaata agccctcata cgttaacgtc gatgtccagt tcggagcggg
     3961 cggcctcgtt tcgtgagcgt ttttcgcgtt cgtcatcaac cgtgaaagga caatgcatga
     4021 atgctcggcg caatatgatg cggcgcggcg cggcggccgt cgtgatgctc acctccgcac
     4081 aaggcgcatg ggcccaggag aagataaatc tgttcaggat tgttaccgta aaggatgaaa
     4141 tcgtgatcgg cctcaacgcc gacgaactca acgcgctcgg cggcaatgat gccggcgcgg
     4201 tcgcccgcgc acttgcccag aagggcgacc tgacggcgtg gcaataccgt gtccggcgcg
     4261 gcgccaacgg cgaacttgag caggccccca ccgccaagat cgggcgcgcc aattcctccc
     4321 ttcgggtcca gccctacacg acgccctacg ccatcgtgcc gcacgaatag cgtatgcaat
     4381 aagatttgta cgatcggcag gcgcttgtct gccgatcgta tattttggtg tacgctcatc
     4441 cggctttcct gacaggagaa actaggatgg actaccaagg tcgaaccgtc gtcattaccg
     4501 gcggcaccgg cggtctcggt accgcggttg tggcggcgct gctcgacgcc ggtgccacgt
     4561 gccatattcc ttacctcgtt gaggccgagg cgcacgcgtt cgtgcaccgc gacgacgcgc
     4621 gggtgaagct gtatccgcag atcaacctga ccgacgaaga tgcggttggg cggttctacc
     4681 aacaggttcc tgatttgtgg gcctcgatcc atctggcggg cggctttgcg gccggcaaca
     4741 tcggcaccgc tggaaaatcg gttcttgcaa accagctcga tatgaacatc gtgacttgct
     4801 acctgtgctg ccgcagcgcc gtgcaggcca tggcggcgaa ttctacgggc ggacgcatcg
     4861 tcaacgtggc ggcgcgcccg gcgctggaat ggcgcggcgg cgccggcatg gtcgcctata
     4921 cggcaagcaa ggccgccgtg gcggcgctca ccgttgcact tgccgaggag gtcgcaaggg
     4981 acgccatact ggtcaacgca gtggcgccgt cgatcctcga tacgcccgct aaccgcaaag
     5041 caatgccaaa agccgaccac gcggtgtggc caaaggtgga agacgtcgcc caaaccatcc
     5101 tgttcctcgc atcgcccgcc aacaaggtaa cgcgcagcgc cgtggtgccg gtctacgggc
     5161 gggtgtgatc agtttgcagg ggtggacggg cttcgttttg cctcccccac aaaggactca
     5221 acgtaactcg ccacttcgat cgcagcgagc gcgcgcgagg ggcgggcaag cttcctgatc
     5281 gtattggtcg cgatgatggt gcggttatcc gcataggcct cgtggttctt ctcgatgtcg
     5341 ccgaggtcgt agagatagtt gaccatcaac ccgtaggact gccggcggcc gcgatcggag
     5401 aggtcggcgg gccagttgag ccgttccagg cgggcgccgt tgccgagatg gaaacgggca
     5461 accgcatcga gcggagagcc gccggcattg cgcgcagtca tgaaataggt cgcggcggcg
     5521 cgcaacatgg cgtcgcgcat atcgtcgagc gcggtggcgt cgttccacca atccgtctgg
     5581 tccagtcccg ccagcgctgc acggtcggcc tccgccagcg tcggcgaagg ctgtgtgcgc
     5641 tggcgcgcca gccagccagc gaaattaggc accggcgaca atgtcacgaa agtggagagc
     5701 cgcggcatct cgcgggagat ttccgctact acctgcttga tcaggaaact gccgaaggtc
     5761 accccggcaa ggccgcgctg gcagttcgag attgaataga ataccgccgt attggcgcgc
     5821 tcgggatcga gcggctcgcg tttgatctca aggatcgggg aaatcgcgcc ggggatgtct
     5881 cgagtcagcg ccacctcgac gaagatcagc ggctcgtcga ccagcgctgg atggaagaag
     5941 gcgtagcaac accgatcggg tgaatcgatg cgcgcgcgca aatccaccca atcgcgaatc
     6001 tggtggaccg cctcgtaacg gataatcttc tccagtatca cggccggtgt cgaccagtcg
     6061 atcctgcgca gcaccaaaaa accgcggttg aaccaggacg agaacagatg ggtgaaatcg
     6121 gtgtcgaccg tcgtgaggtc gtcccggcgc gccaacgtgt cgatgagctg gccgcgcatt
     6181 tcgaccagcg cactggtgcc ctggggcgca agattgagcc ggcgcagcaa ttccaggcgt
     6241 cgcggctcgg tggcggcgtg cagctctgcg acggcgacat cggacggctt ggtttgccat
     6301 gcctccatgg ccgtctcgat ccgggcccga tcggcgccga accgggtggc cagcgcctca
     6361 aaaaacgcga tccggggtcc gatggtaagg tcggcgtagc gggcgagtat ttcgcgcgcc
     6421 agcgcgacgc ccgacgcctc gccccggttc gataacagct cctcgcacag gtcggcaagg
     6481 ttctcggtgg tctcggcagg actgtcgcgg cgctcgcggg cgcgatcgag cagggagcgc
     6541 ccgcgttccg agatggtctg tagcaattcg ccgaaaaacg acgtgttcat cttaccgccc
     6601 gattcatgca cccatcacgg cattggcaag ccaggtcgcg atttccggga atatacataa
     6661 tacgatgacg gcaaaaatca tcagcgcaac gaacggcatc acaccccaga tcacgtcccg
     6721 taacgggata tcgggagcga tgctcttgat cacgaatatg ttcagtccga ccggagggtg
     6781 gatcaggccc aattccatca cgatggtcat gatgacgccg aaccagatga gatcgaaatg
     6841 ggccgccttg agaggcggca aaatgatcgg agcggtcatc agaatgatcg agaccggcgg
     6901 cagaaagaat cccagcacca caaccatcaa caggatagca gtgagcagaa cccagcgcgc
     6961 gagatcgagc gatacgatcc attccgccgt cgactgactt atatgcagat agctcatgac
     7021 ataggaataa agtagcgaca tgccgatgat gaacatcagc atggtggact cgcgcagtgt
     7081 tgccgtaagg atgggtgcga gatcaccggc cctccatacg ccatagatgg acgctatcag
     7141 caggagagca agaaccgcgc caaggccggc ggtctccgac ggggtcgcgt agccgccata
     7201 gagcgcaatc ataacgcctg tcagcagaat cacaaagggc agcacgcgcg gcaggaggtc
     7261 gaagcggtcg cgcagggtca gttcgtcggg ccgcagcaat tcggacatga cgccggtgcg
     7321 cttttgtgcc gccacg
//
LOCUS       DATILV010000634         3754 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_405442, whole genome shotgun sequence.
ACCESSION   DATILV010000634 DATILV010000000
VERSION     DATILV010000634.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3754)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3754)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3754
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_405442"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..696)
                     /locus_tag="VLJ17_14975"
     CDS             complement(139..696)
                     /locus_tag="VLJ17_14975"
                     /inference="COORDINATES: protein motif:HMM:NF013756.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase"
                     /protein_id="HSV24317.1"
                     /translation="MSWIDDQRPDDAMAGAFEAIGPEPVVTVAAPVFRDAMCRLGAAV
                     HVVTTAGPGGKTGFTATAVCSVSDAPPTLLVCLNRRSEGSLILRENKVFCVNTLGADC
                     EAVADVFAGRTGAVKAERFAIGRWSTLNTGAPVLAGAVVAFDCRVIEIRAVASHNVIF
                     GAVVDIWLGGVGPALVYHNRAYKQV"
     gene            complement(811..2406)
                     /locus_tag="VLJ17_14980"
     CDS             complement(811..2406)
                     /locus_tag="VLJ17_14980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018073577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase N-terminal
                     domain-containing protein"
                     /protein_id="HSV24318.1"
                     /translation="MSLSTARPKAEDFIGASNRPFTGKEYLESLRDGREIYVYGERVP
                     DVTTHPAFRNAARTIAKLYDALHDPSTKDVLTCPTDTGNGGFTHKFFRVAHSREDLIG
                     QRDAIAAWARMSYGWMGRTPDYKASLMNTLGANDAFYDKFAANAQSWHRRAQNHVLFM
                     NHAIVNPPVDRAKAADQVKDIFITIQKETDAGIYVSGAKVVATSSALTHYNFLGQNAA
                     MPINDSDLAVMFIAPMNVPGVKLFCRASYEMMASVMGTPFDYPLSSRFDENDAIFVFD
                     NVLIPWEDVLLHRDIEKIKIFYPRSGFLNGYQFQGCTRLAVKLDFMVGIIAKALRATG
                     AEDFRGNQAMLGEIIAWRNLFWAISDAMAMHPVPWVGDTVLPNAQSGASYRVFAGDAY
                     GRIKEIVQKIVASALIYLPSSVLDFENPDIDKYLAKYVRGSHGIEYRERIKVMKLLWD
                     AVGTEFGGRHELYEMNYAGNHEDIRIQAMWNARGSGALDQMIALADACMRDYDERGWT
                     GTTWINPDDVSHFGSHRRARAAE"
     gene            2604..3521
                     /locus_tag="VLJ17_14985"
     CDS             2604..3521
                     /locus_tag="VLJ17_14985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013892483.1"
                     /note="LivHMGF is the membrane component of the LIV-I/LS
                     branched-chain amino acid transporter; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease LivH"
                     /protein_id="HSV24319.1"
                     /translation="MEVFVQQLINGITLGSIYGLIAIGYTMVFGIIGMVNFAHGDVFM
                     VSAFIALIAYLIVTAWLGIASVIAALVIVLVVAMVLTSVVNWAIERVAYRPLRGSFRL
                     APLISAIGMSIVLSNFVQVAQGPRNKSVPPLLQGEFVLMARQDYQVTLSHRQLLIWVV
                     TALLLAVFWHVVSRTSLGRAQRACEQDQKMAALLGVDVDRTISITFVIGAALAAVAGT
                     MFLMYYGVVNFADGFTPGVKAFTAAVLGGIGSLPGAVIGGLLIGLIETMWSAYFSIDY
                     KDVAAFSILAVTLIFLPQGLLGRPDVEKV"
BASE COUNT          689 a         1173 c         1138 g          754 t
ORIGIN      
        1 cggatagcac ctatgatgcg cagccgtgcc ggcttagacc gcggcgcggc ctcgccctcg
       61 cgcgcctttg cgggcgcatc cttgcgcacg ttatccttgt ctttcagcaa gaaacgcctc
      121 agcccaccga acgctgccct acacctgctt atacgcacga ttgtggtaga ccagtgccgg
      181 acctacccca cccagccaga tgtccacaac cgcgccgaaa atgacgttgt ggctggccac
      241 cgccctgatt tcgatcaccc ggcaatcgaa agccacaacg gcccccgcca gaaccggggc
      301 accagtgttc aaagtggacc accgaccgat ggcgaagcgc tccgccttga cggcaccggt
      361 gcgaccggca aacacgtcgg cgacggcttc gcaatcggcg cccaaggtgt tgacacagaa
      421 gaccttgttt tcgcgcagga tgaggctgcc ctcgctcctg cggttgaggc ataccagcag
      481 ggtgggcggg gcgtccgaca ccgagcacac cgcggttgcc gtgaacccgg ttttgccgcc
      541 aggtcccgcc gtggtcacca catggacggc ggcgccgagg cggcacatgg cgtcacgaaa
      601 caccggtgcc gctacggtaa caactggctc aggcccgatc gcctcaaagg cgcccgccat
      661 agcatcatcg ggtcgttgat cgtcgatcca gctcatgggg cacaccataa tacatcgccc
      721 ggccgagcgg gagccgcgcc gggaccgcgc ccgcgctttc tacgaattaa ggaaaatgga
      781 gccgcgggac gtggtcccgg gagtagcgcc ctactccgcg gcccgcgcac gtctgtgaga
      841 cccaaaatgg gacacgtcgt ccggattgat ccaggtagta ccggtccagc cacgctcgtc
      901 gtaatcccgc atgcaggcgt ccgcgagtgc gatcatctgg tcgagtgctc cggagccgcg
      961 cgcattccac atcgcctgga tgcggatgtc ctcgtggttc ccggcatagt tcatctcata
     1021 aagttcgtga cggccaccga actcggtgcc gaccgcatcc cacaagagct tcatcacctt
     1081 gatgcgctcg cgatattcga tgccgtggga gccacgcaca tatttggcga gatacttgtc
     1141 gatatcgggg ttctcgaaat caagaaccga cgatggcagg tagatcagcg ccgacgccac
     1201 gatcttctgc acgatctcct tgatgcggcc ataggcatcg ccggcgaaca cccggtagct
     1261 cgcgcccgat tgcgcattgg gcagcacggt gtcgccaacc cagggcaccg gatgcatcgc
     1321 catggcgtcg gagattgccc agaacaggtt acgccatgcg atgatctcac caagcatcgc
     1381 ctggttgccg cggaagtcct ccgccccggt tgcccgcagc gccttcgcga tgatcccaac
     1441 catgaaatcg agcttgacgg cgagcctggt acagccctgg aattggtagc cgttgagaaa
     1501 gccagaccgc ggatagaaga tcttgatctt ctctatgtcg cggtgaagca gcacgtcttc
     1561 ccacgggatc agcacattgt cgaacacgaa gatggcgtcg ttctcgtcga agcgcgacga
     1621 caacggatag tcgaacggcg ttcccatcac gctggccatc atttcataag atgcgcgaca
     1681 gaacagcttt acgcccggca cattcatcgg cgcgatgaac atcacggcaa gatcggaatc
     1741 gttgatcggc atcgcggcgt tctggccgag gaagttgtaa tgggtgagtg ccgacgacgt
     1801 cgccaccacc ttggcgccgg acacgtagat gccggcgtcg gtctccttct ggatggtgat
     1861 gaagatatcc ttgacctgat cggccgcctt ggcacggtcg accggcgggt tgacgatggc
     1921 gtgattcatg aacagcacgt ggttttgggc gcgccgatgc cagctttgcg cattagccgc
     1981 gaacttgtcg tagaaagcgt cgttggcccc gagcgtgttc atcagcgacg ccttgtaatc
     2041 gggcgtacgc cccatccagc cataggacat gcgagcccag gccgcgatgg catcgcgttg
     2101 gccgatcaaa tcctcgcgcg aatgggcgac gcgaaagaat ttatgggtaa agccgccgtt
     2161 tccggtatcg gtcggacagg tcagtacgtc cttggtggag gggtcgtgca gcgcgtcgta
     2221 gagcttcgcg atcgtgcgcg cagcgttgcg gaacgccggg tgggtggtga cgtcgggaac
     2281 gcgctcgcca tagacgtaga tctcgcgccc gtcgcgtagg ctttcaaggt attccttgcc
     2341 ggtgaaaggc cggttggacg cgccgatgaa atcctcggcc ttgggccgag ccgtcgacag
     2401 gctcattgtc gggttcatgg gcggcctccg atgatctttg tgctcatgat gacagatgac
     2461 gcgatcattg acccgacggc atggtctgcg aaagacacga atccggggat ttctggaaca
     2521 attcccacga cgttgccgcg ccgttaccgc cctgttaaga ctcgcggcgt cggcaccgca
     2581 atgagggtag gcactgcaga cgcatggaag tgttcgtcca gcagctcatc aacggaatca
     2641 cgctgggctc catctatggc ctgatcgcca tcggctatac gatggtgttc ggcatcatcg
     2701 gaatggttaa cttcgcccat ggcgatgtgt tcatggtgtc agcgttcatc gcgcttatcg
     2761 cttatctgat tgtcaccgcc tggctcggca tcgcctccgt gatagcggcg ctcgtcattg
     2821 tgctcgttgt cgccatggtg ctgacctcag tcgtcaattg ggcgatcgag cgcgtcgcct
     2881 accggccgtt acgcggctct ttccggttgg cgcctttgat ttccgctatc ggcatgtcga
     2941 tcgtactgtc caatttcgtg caggtcgccc aaggcccgcg caacaagtcg gtcccgccgc
     3001 tgctgcaggg cgagttcgtg ctgatggcgc ggcaggacta ccaggtgacc ctgtcgcacc
     3061 ggcaattgct gatctgggtc gttaccgcac tcttgctcgc ggtgttctgg cacgtcgtga
     3121 gccgcacctc gctcggccgt gcgcaacgcg cctgcgagca ggaccagaag atggcagcgc
     3181 tccttggcgt cgacgtcgac cgcaccatct cgatcacctt cgtgatcgga gcggcgctgg
     3241 cagcagtcgc cggcaccatg tttctcatgt attacggtgt ggtgaacttc gccgatggct
     3301 tcacgccggg cgtgaaagcc ttcacggcgg cggtgctcgg gggcatcggc tcgctgcccg
     3361 gcgccgtgat cggcggcctc ctgatcggcc tcatcgaaac catgtggtcc gcctattttt
     3421 cgatcgacta taaggacgtc gcggccttct cgatcctcgc cgttaccttg atcttcttgc
     3481 cccaaggcct gctcggccgc ccggatgttg agaaggtgtg aggtccagtg agatgcgctt
     3541 gactttgcgt ttttaccgag agcccgtgtc ggcggaggcg ctgggccctc tccacaggct
     3601 catatctgcg aagacgcaac ggctgcggtc aaatacgtcg tcccaaccgc acgccaagaa
     3661 tgatagccgc catgtctagc cccgcatcag agcatgtcac aagcgcgttt aaagacgccg
     3721 gcttctgggc gctggtggcg ttcgggctat tcct
//
LOCUS       DATILV010000635         4102 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4494858, whole genome shotgun sequence.
ACCESSION   DATILV010000635 DATILV010000000
VERSION     DATILV010000635.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4102
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4494858"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..782
                     /locus_tag="VLJ17_14990"
     CDS             <1..782
                     /locus_tag="VLJ17_14990"
                     /inference="COORDINATES: protein motif:HMM:NF012506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="citrate/2-methylcitrate synthase"
                     /protein_id="HSV24320.1"
                     /translation="ANVRKAIRLTSQIAVIVAAYDRIRKGKNVVESDRSLSHPANFLL
                     LLNGNRPSETAERALDIALILHADHELNASTFAARVTAATLSDMHSAITSAIGALKGP
                     LHGGANEAVFLMLQEIDKKGVDPVEYVRGQLAQKKKISGFGHRVYHTEDPRATHLRQM
                     SRDLGKSSGQGKWFDMSSRIEHFVKSEKKLNANVDFYSASTYHTLGIDVDLFTPVFAV
                     SRISGWTAHVIEQLDDNRLIRPRADYVGPSYPQHYIPIDRR"
     gene            906..1304
                     /locus_tag="VLJ17_14995"
     CDS             906..1304
                     /locus_tag="VLJ17_14995"
                     /inference="COORDINATES: protein motif:HMM:NF013199.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HSV24321.1"
                     /translation="MSKLLSRPLITGLILTLACIAIAADPPGDSTDDWPSYGHDPGGM
                     RYSPLTQINRENVAKLKIAWIFHTGDISDGSGDRKRSGFENTPLVVDGTLYLTTPFNR
                     VIALDPETGKQRWAYDPKIDLDGDYGDGQC"
     gene            1456..2637
                     /locus_tag="VLJ17_15000"
     CDS             1456..2637
                     /locus_tag="VLJ17_15000"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase family protein"
                     /protein_id="HSV24322.1"
                     /translation="MQRVYFDNNASTPVLPEIFDAMRPYFGERFGNASSIHHHGQETR
                     GAVERARESVATLLGCRASEIVFTGGGTEADNLAIFGLTKPGLTKPGDHVITSTIEHH
                     AVLNSCKQLEASGCKVTYVPVDGHCLVDPDDVRRALRTNTKLITIMMANNETGVLQPV
                     EDIAKVAAEADIYFHTDAVQAAGKVPINVKQIGCDLLSISGHKMHAPQGVGALYVRKG
                     TILQAMLYGGRHERSRRAGTENVPGIVALGKAAKLAQDALQNGEVADMATMRDRIEKA
                     ILNEVDATCRNGKGAPRVPNTTNICFDYIDGEALVIALDLKGLAVSTGAACSSGAIEP
                     SHVLTAMGLSPDRARASLRFSLGKQNTQEEVDFALSLVPATVARLRELSPVYNKESVS
                     N"
     gene            2809..3918
                     /gene="mnmA"
                     /locus_tag="VLJ17_15005"
     CDS             2809..3918
                     /gene="mnmA"
                     /locus_tag="VLJ17_15005"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR00420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HSV24323.1"
                     /translation="MLSTTIAVAMSGGVDSSTVAAMLRAEGHNVIGLTMQLWNQRRLA
                     GHPGMPESVQGRCCSLDDVYDARRVAETIGIPYYVVNHEDRFERDVVRPFVEEYLSGR
                     TPIPCSLCNNHLKFDQLLIVARQIGADGVATGHYARVEFDDVSGRWLLKRPTDLAKDQ
                     TYFLFGLTQEQLSRTLFPLGGMTKPQVRELARQYGLALAEKPDSQEICFVPGGDYKNF
                     LDAYLAERGDALPDTSGELVTANGDVIGEHAGIHNFTVGQRKGLGVATGSPLYVIQIK
                     GDSRQVIVGNQQELYSTTLRARRVNLIAVKDLREPMRVSVKIRHRHEPAPALIEKSGT
                     DEVLVTFDQPQRAVTPGQAAVFYEDDVVVGGGWIV"
     gene            complement(3915..>4102)
                     /locus_tag="VLJ17_15010"
     CDS             complement(3915..>4102)
                     /locus_tag="VLJ17_15010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24324.1"
                     /translation="GKSHPAPNDSVLSARAACRFNKLCQPRQRLRIQLIVLAPTLPDQ
                     ANIAGMRNAAVFGNNSS"
BASE COUNT          880 a         1248 c         1111 g          863 t
ORIGIN      
        1 aagccaacgt ccgcaaggcg atccggctga cttcgcagat tgccgtgatc gtcgctgcct
       61 atgatcgcat tcgcaaaggg aaaaatgtcg tcgagtctga ccgctcgctt tcacaccccg
      121 ccaatttcct gttgcttcta aatggtaacc gtccctcgga gactgctgag cgcgctctcg
      181 atattgctct catcctccac gccgatcacg aacttaatgc ttccacgttt gccgcgcggg
      241 tgacggccgc gaccctttct gatatgcact ccgctatcac ttcagccatc ggagcactaa
      301 aaggtccgct gcacggcggc gccaacgaag ctgtgttcct catgctccaa gaaatcgaca
      361 agaagggcgt ggacccggtg gagtacgttc gcggccaact agcacaaaag aaaaagattt
      421 ctggcttcgg ccatcgcgta tatcacaccg aagatccgcg cgccacgcac ctccggcaaa
      481 tgtcccgcga tctcgggaag tccagcggcc agggcaaatg gtttgacatg tcgagcagga
      541 ttgagcactt cgtaaaatca gaaaagaaac tgaacgcgaa cgtcgacttc tattccgctt
      601 ccacctatca cacacttggc atcgacgtcg acctcttcac tccagttttt gccgtgtccc
      661 gcatcagcgg ttggactgcg cacgtgatcg agcagctcga cgacaatcgc ctcatccggc
      721 cgcgtgcgga ttacgttggg ccgtcatatc cgcaacatta cattccgatc gaccgacgct
      781 aaagacataa cgcctgggga cagccgcgct gggctgtgca gtcgagcgag ctcggcagct
      841 tgatcttcag ccgaggaaat cagatactcc ttcattccgt ctgctacttt tattgagacc
      901 tccccatgag caaactcctt tctcgaccgc taatcactgg gctaattctc acgcttgcgt
      961 gcattgccat cgccgccgat ccgcccggcg actccaccga cgattggcca tcttacggcc
     1021 acgatcctgg cggcatgcgc tactcgccgc ttacgcaaat caatcgcgag aacgttgcta
     1081 agttgaaaat tgcatggatt ttccacaccg gtgatatttc agacggcagc ggcgatcgaa
     1141 aacgaagcgg cttcgagaat actccgctcg tggtcgacgg cactttgtat ctcaccactc
     1201 ctttcaatcg agtaattgcc cttgatccag aaaccggcaa gcagcgctgg gcctacgacc
     1261 cgaaaatcga cctggacgga gactatggag acggacaatg ttgagccgga cagtgatgta
     1321 gcggtccttt aagccgcgaa gcggcgaaag agaagtctcc aaatcgctgg cattgcaaat
     1381 cgacgaaacc tttgcctgca agccaatcaa accacggcac ggtgcgccac tgagcgtaaa
     1441 atagactctg tacttatgca gcgcgtctat ttcgacaata acgccagcac ccccgttctc
     1501 cccgaaattt tcgacgccat gcggccctac ttcggcgagc gttttgggaa tgcgtcttct
     1561 atccatcatc atggccagga gacgcgaggt gccgtcgaac gtgcgcgtga atctgttgca
     1621 actcttctgg gttgccgtgc ttcggagatc gtattcaccg gcggcggcac tgaagcggat
     1681 aacctcgcca tcttcggtct gacaaagcca ggtctgacaa agccaggcga tcacgtcatc
     1741 acgtcgacca tcgaacacca cgctgtgctg aattcgtgca agcaattgga agcctccggc
     1801 tgcaaagtca cttatgttcc tgttgatgga cattgcttgg tcgatcccga tgacgttcgc
     1861 cgcgcactgc gcacgaacac caagctaatc acgatcatga tggcgaacaa cgaaactggt
     1921 gtgctgcagc cagtcgagga catcgcaaaa gtcgctgctg aagccgacat ctatttccat
     1981 accgacgcag tacaggcagc agggaaggtg cccatcaacg taaagcagat cggctgcgac
     2041 ctgctctcga tctccggcca caagatgcac gcgccgcaag gtgttggcgc actgtacgtt
     2101 cgcaagggaa cgattctgca ggccatgctt tacggcggac gccatgagcg ctcgcggcgc
     2161 gccggcaccg agaatgttcc tggaattgtc gctttgggca aggcagcaaa attggcccag
     2221 gacgcattgc aaaatggcga agtggccgac atggccacca tgcgcgatcg aattgagaaa
     2281 gccatcctca atgaagtcga tgcgacttgc cgcaacggca agggcgcgcc acgcgtcccg
     2341 aataccacaa acatttgttt cgattacatc gacggcgagg cgctggtgat tgcgctcgat
     2401 ctcaaggggc tcgcggtctc gacaggcgcg gcgtgctcct cgggagcaat cgagccttct
     2461 cacgtgctca ccgcgatggg actctcgccg gaccgcgccc gcgccagcct gcgctttagc
     2521 ctgggcaagc agaacacgca agaagaagtc gacttcgctc tcagcttggt tcccgcaacc
     2581 gtagcccgcc tgcgtgagct gtccccggtt tacaataaag aatcagttag caattagcgc
     2641 ttggtgttta gccgctacgt gcggatttgg gaaggccacg agtttactcg tgccgccaag
     2701 gctttttaac ttggtcatcc cgagcggcct cttttgccgc gaggaatctg ctttaccgtt
     2761 cgcaaccggc tatcgcactg atgctaatcg ctcactgcta attgctaaat gctgtccacc
     2821 accatcgccg ttgccatgtc cggcggagtc gattcctcca ccgtcgcggc catgctccgc
     2881 gccgaaggac ataatgtcat cggcctcacg atgcagctct ggaatcagcg ccgtctggct
     2941 ggccatcccg gaatgcccga gtccgttcag ggtcgctgct gttcgctcga cgatgtttac
     3001 gacgcccgcc gtgtcgcaga aaccatcggc atcccgtact atgtcgtcaa tcacgaggat
     3061 aggtttgagc gcgacgtggt gcgcccgttt gtcgaagagt atctttcggg ccgcactccc
     3121 attccttgca gtctgtgcaa caatcacttg aagttcgatc agttactcat tgttgcccgg
     3181 cagattggcg ctgacggcgt cgccaccgga cattatgccc gcgtcgagtt tgatgacgta
     3241 agtggtcgct ggctcctcaa gcgcccgacc gaccttgcta aggatcagac ctacttcctt
     3301 ttcggtctca cgcaggaaca gctcagtcgg acgctgtttc ccctgggcgg aatgaccaag
     3361 cctcaggtcc gagaactggc ccgccagtac gggctcgcgc tcgccgagaa gcccgattct
     3421 caagagatct gcttcgttcc gggcggagac tacaagaact ttctcgacgc ctatctcgcc
     3481 gaacgaggcg atgcgctgcc cgacacctcc ggtgagttag ttaccgccaa tggcgacgtg
     3541 attggcgagc acgccggcat tcacaacttc acagtcggac agcgcaaagg actcggcgta
     3601 gcgacaggct cgccgctcta tgtgatccag atcaagggcg actcgcgcca ggtaattgtc
     3661 ggcaatcagc aagagcttta ctcgacgacg cttcgcgcac gccgcgtcaa tcttattgca
     3721 gtcaaagatt tgcgcgagcc gatgcgagtc tccgtcaaga tccgtcatcg ccacgagcca
     3781 gccccggcac tgatcgagaa gtccggcacc gacgaagtgc tcgtcacctt tgatcaaccg
     3841 cagcgcgccg tcactcccgg ccaggctgct gtgttctacg aggatgacgt tgtcgtgggc
     3901 ggcggctgga tcgtctagct cgaattgttg ccgaaaaccg cggcgttgcg catgcccgca
     3961 atgttcgctt gatcggggag agtcggcgca aggacgatca actggatgcg cagacgttgg
     4021 cgcggctggc acaacttgtt gaagcggcac gctgcccgtg cgctcaggac ggaatcatta
     4081 ggggcagggt gtgattttcc tc
//
LOCUS       DATILV010000636         4091 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4495014, whole genome shotgun sequence.
ACCESSION   DATILV010000636 DATILV010000000
VERSION     DATILV010000636.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4091
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4495014"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(162..1358)
                     /gene="aepY"
                     /locus_tag="VLJ17_15015"
     CDS             complement(162..1358)
                     /gene="aepY"
                     /locus_tag="VLJ17_15015"
                     /EC_number="4.1.1.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015916859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033980 - phosphonopyruvate decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0017000 - antibiotic biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonopyruvate decarboxylase"
                     /protein_id="HSV24325.1"
                     /translation="MIDANAFIDAAAVRGFDFYSGVPCSFLTPLINRVASNRHITYVG
                     ATSEGEAIAIAAGAWLGGRRTVVMCQNSGLGNAVNPLTSLNWPFRIPTLLIVTWRGQP
                     GTMDEPQHALMGPILPRLLSVIQVAHGRFPRETSEIVPALDMAEASISKSDLPFAFLM
                     EQNSVRNNGLDEPARLPLPPGARIDLSSGGLRPARADLLERFLAAVPDDTAVIATTGK
                     CGRELFTLADRPQHFYQVGSMGCASGMGLGVALATLRRVAVLDGDGAVLMKLGSLATI
                     GAYRPGNLTHILYDNGVHDSTGGQATVAPVIDFAGVALACGYRGAWICDSVEGFESAL
                     AEALAAEGPVLVHARIRRGSMAMLGRPTVPPYEVARRFKAFLAQPAEALASGTDLVNS
                     ATAAIA"
     gene            complement(1368..3026)
                     /gene="aepX"
                     /locus_tag="VLJ17_15020"
     CDS             complement(1368..3026)
                     /gene="aepX"
                     /locus_tag="VLJ17_15020"
                     /EC_number="5.4.2.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR02320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050188 - phosphoenolpyruvate mutase
                     activity [Evidence IEA];
                     GO_process: GO:0019634 - organic phosphonate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate mutase"
                     /protein_id="HSV24326.1"
                     /translation="MVEDSLSSHRSGVGGLEVSRFAALRRLLQSRDLTFLMEAHSGLS
                     AKIVEKAGFLGIWASGLSISAMLGVRDNNEASWTQILDVLEFMADATKVPILADSDTG
                     YGNFNNVRRLVRKLCQRDIAGICIEDKLFPKSNSFVSERQPLADVDEFCGRIKAGKDS
                     QTDNDFSIVARTEALVSGHSLDEALRRAESYHAAGADAVLVHSKQSSATEILAFMERW
                     DKRCPVVIVPTTYHATPTEIFRRAGISTVIWANHLVRASITAMQETVQQIFADQSLHE
                     VEGRVAPLHSVFGLVGNQELEDAARRYLPGKNAVHGIVLAASRGDGLHALTKDQPKCM
                     IDIRGQPLLRRLVDTLWDCGVRHVTVVRGYHKEAIALRDVCMVDNEYYETTGEVASLV
                     AAYDRLDGEAVVVYGDVLFRRYILDGLLATPGDIVIAVDALWKHNGGHQADGYDLVVT
                     DRGFSGHYLEDSPVALRSIGNAIDPTDVCGEWIGLLRMTAKGARRVREELDRMVADGS
                     WASANMSMLIARLAGRYTIGVHYITSHWLDVDTVLDLADARNFS"
     gene            3128..4018
                     /locus_tag="VLJ17_15025"
     CDS             3128..4018
                     /locus_tag="VLJ17_15025"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphocholine cytidylyltransferase family
                     protein"
                     /protein_id="HSV24327.1"
                     /translation="MTIATEAASSSSAASVIILAAGVGRRLGLSQANACLPKVLLEFG
                     GRSLLARHISILRKCGMSNITVVAGYRAQLLRAEIARIEGGSTVSIIENFDYQEGSVV
                     SLWTAREILRSVSRVILMDGDVLYDERLMARLVSTRLKNCLLLDRNIEPGDEPVKICV
                     AHGRIVDFHKRPRVAHEWYGESVGFFHFAPDSAAELATRAEAYVTQGRRDMEYEELIR
                     DMILASGPRDFGFEDISGLPWIEIDFLEDAEKARSANSASEILPLPSTSTSLTFTPNG
                     SESFQSSQLAMVGEHHPHAA"
BASE COUNT          928 a         1202 c         1160 g          801 t
ORIGIN      
        1 gtcctcgcta cctttcgaga gcccagggaa aagtggttcg agtttgagca attctacaac
       61 tttctgcgca atcgcggtgt agtaatctat ccggggaaat tggcagacga gcctagcttc
      121 cggatcggct gtattggcgc catagacgag gcagacattc gttacgcgat agcggcagtc
      181 gccgaattca caaggtcagt accgcttgcg agagcttccg cgggctgagc caaaaaagcc
      241 ttgaaccgcc gcgccacctc atatggcggt acggtaggcc gcccgagcat cgccatggaa
      301 ccgcgccgaa tgcgcgcatg caccaaaacc ggtccctcgg ccgccaaggc ttcggccagg
      361 gccgattcga aaccttcgac cgagtcgcaa atccacgcgc cacgataacc gcaggctaac
      421 gctacaccgg caaagtcgat aaccggagca accgtagcct ggccaccggt cgagtcgtgg
      481 acaccattat cgtacaagat gtgagtgaga ttgccgggcc tgtatgcgcc gatagtcgcc
      541 aggctgccga gcttcataag cactgcgcca tccccatcca aaaccgcaac tctccggagt
      601 gtcgcgagcg ccaccccgag gcccattcca ctggcacaac ccatcgagcc gacttgatag
      661 aagtgctgcg ggcggtcggc gagtgtgaag agctcacgac cacatttccc ggtagtagcg
      721 atgactgcgg tgtcgtctgg cacagccgcg agaaatcgtt cgagcaaatc ggcgcgggcc
      781 gggcgcaagc cgccgctgga aagatcaata cgtgctcccg gcggcaatgg caggcgtgcc
      841 ggctcatcca agccgttatt gcgtacgctg ttttgctcca taaggaatgc aaacggcaga
      901 tcgcttttgc taatcgaagc ctcggccata tcgagcgcgg gcacaatctc gcttgtttcg
      961 cgaggaaaac ggccatgcgc tacttggatc actgatagca aacgcggcag gatagggccc
     1021 atcaaggcat gctgcggctc atccatggtg ccgggctgac cgcgccaagt aacgatcagc
     1081 agagtgggaa tgcggaatgg ccaattaagc gaggtcagcg ggttgactgc gttgccaagc
     1141 cccgagtttt ggcacatcac gacggtgcga cgcccgccta gccaagcccc agcagcaatg
     1201 gcaattgcct cgccttcact cgtggccccg acataagtga tatgtcgatt gctcgcgacg
     1261 cgattgatca agggggtcag aaagctacaa ggcacgccgg aatagaaatc gaaaccacga
     1321 acagcggcag catcgataaa cgcgttggcg tcgatcatca cacccagcta cgaaaaattg
     1381 cgcgcatcgg ccagatcgag gacggtgtct acgtcaagcc aatgcgaagt gatataatgt
     1441 acaccaatcg tatagcgccc tgcgagacgg gcgatcagca tcgacatgtt ggcagaggcc
     1501 cacgagccat ccgccaccat gcgatccaat tcttcacgca ctcgccgggc acctttcgcc
     1561 gtcatccgca atagaccaat ccactcgccg cagacatcag tcggatcgat ggcattgccg
     1621 atagatctta gcgcgaccgg actgtcctcc agatagtgac cggagaaacc gcgatccgtg
     1681 acaacaagat cgtatccatc ggcttggtgc ccaccattgt gcttccaaag cgcatcaacc
     1741 gcgatcacga tatcgcctgg ggtggcaaga agcccatcca gaatgtagcg gcggaacagc
     1801 acgtccccgt agacgacgac cgcctcccca tcaagccgat cgtatgcggc cacaagcgaa
     1861 gcgacctcgc cggtagtctc gtaatactcg ttatcgacca tgcacacgtc gcgcagcgct
     1921 atcgcttcct tatggtagcc gcgcactacc gtgacgtgtc gcacgccgca atcccacaat
     1981 gtatcgacaa gccgacgcaa cagtggttgg ccgcggatgt cgatcataca cttcggttga
     2041 tccttggtaa gcgcgtgaag tccgtcgccg cgggaggcgg caagcacgat accgtgcacc
     2101 gcgttcttac ccggtaggta acgtcgggca gcgtcctcaa gctcctggtt cccgaccagg
     2161 ccgaagactg aatgaagggg ggccacccga ccttcgactt catgcagcga ctggtccgcg
     2221 aatatttgct gcacggtctc ctgcattgcg gttatcgaag cccgcacgag gtgattggcc
     2281 caaatcacgg tcgagatgcc ggcacgtcgg aatatctccg tcggcgtcgc gtgatacgtt
     2341 gtcggcacaa tgaccaccgg acagcgctta tcccaccgct ccatgaaagc aaggatctcg
     2401 gtggccgacg attgttttga atggacaagc acggcatcgg cgccggccgc gtggtagctt
     2461 tcggcgcgcc gaagcgcctc gtctagagaa tgtccggaga ccagcgcctc tgtacgcgcg
     2521 actattgaga agtcgttatc ggtctgactg tccttgccgg ccttgatccg gccacaaaac
     2581 tcatcgacat ccgcgagcgg ttggcgttcg ctgacgaaag agttgctctt tggaaacagt
     2641 ttgtcctcga tgcaaatgcc ggcaatatcg cgctgacata acttgcgcac cagccggcgg
     2701 acgttgttga aattcccgta accggtatcg ctatctgcca agatcggcac cttagtcgca
     2761 tcagccataa actcgagcac atcgagaatt tgggtccacg aagcttcatt gttatcgcgg
     2821 acaccaagca tcgccgagat agaaaggcct gacgcccaga tgccgagaaa gccggccttc
     2881 tcgacgatct ttgccgagag accgctgtgc gcctccatca ggaacgtgag gtcccgcgac
     2941 tggaggagtc tgcgaagggc cgcaaagcga ctgacttcca gcccgcctac accagaacga
     3001 tgggacgaga gagagtcttc aaccactcgt gctaattccc tcttggccca attcggccgc
     3061 acttcgactg cgtggagcgc ccaaggcaaa ggtttatggt tacatttctg tcacaaaaag
     3121 tgtctgcatg acaatagcga ctgaagccgc aagctcctca tcagcggcga gtgtgattat
     3181 cctcgcggcc ggggtcggac ggcgattggg cttgtctcag gctaatgcct gtttgcccaa
     3241 ggtattgctg gagttcggcg gacgaagcct actcgcccgg catattagca ttctgagaaa
     3301 atgcggcatg agcaacataa ccgtggttgc tggctaccgc gcccaactgc ttcgcgcgga
     3361 gattgccagg atcgaagggg gcagcacggt gtcgataatt gagaatttcg attaccaaga
     3421 gggcagcgtg gtttcccttt ggacagcgcg ggaaatctta cgcagtgtta gtcgcgtcat
     3481 tctgatggac ggagatgtgc tgtacgacga gcggctgatg gcccggcttg tgagcactcg
     3541 cttaaagaat tgcttgctgc tcgatcgcaa tatcgagccc ggtgatgagc cggttaagat
     3601 ttgtgttgcc catggtcgca tcgtggattt tcataaacgc ccacgggttg cccatgagtg
     3661 gtatggcgaa tcggtcggct tcttccattt tgctccggac tcggccgcgg agcttgccac
     3721 tcgagccgaa gcctatgtca cccaaggacg tcgagacatg gagtacgagg agctgattcg
     3781 cgatatgatt ttagcgagtg gacctcgaga cttcgggttt gaggacatta gcggccttcc
     3841 ctggatcgaa attgacttcc ttgaagatgc ggagaaggca cgaagcgcta actcggcctc
     3901 ggaaatcttg ccattgccgt caacatccac cagtttgacg ttcacaccaa acgggagcga
     3961 gagctttcaa tcctcccagc tggccatggt gggcgagcat catccgcatg ctgcctaaga
     4021 ttagctagag agcgcccacg gaagccgacg cctgactgaa atccattgag ccaaaaagcg
     4081 ctcaaccggc c
//
LOCUS       DATILV010000637         3465 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3472836, whole genome shotgun sequence.
ACCESSION   DATILV010000637 DATILV010000000
VERSION     DATILV010000637.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3465)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3465)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3465
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3472836"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..398
                     /locus_tag="VLJ17_15030"
     CDS             <1..398
                     /locus_tag="VLJ17_15030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HSV24328.1"
                     /translation="HDPNRHDAHIRAFALTTPQAIPAGAFEMFIELVRSLHGPNLLRV
                     KGVVKLAEHPDAPVVVHAVQHLMHPAARLERWPDDDHSTRIVFIVRDMEPRAITELFS
                     AFLGTSAPDRPDLAAIADNPLVPFGGIDR"
     gene            976..2784
                     /locus_tag="VLJ17_15035"
     CDS             976..2784
                     /locus_tag="VLJ17_15035"
                     /EC_number="6.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020180116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain-acyl-CoA synthetase"
                     /protein_id="HSV24329.1"
                     /translation="MKFSKRLQGDLMFLRGALRTIRRTSPIARNPTRIFPLMVDELAA
                     RHGDKPALISDRESLTYRALAERSCRYARWAVAQGLDKGDVVALLMTNRPEYVAIWLG
                     IIRAGGTVALLNTNLAGPTLAFCIDSVAPKHVIVAGEFAHSLSSADSYRKTTPRIWLH
                     GDANHPQQHHPRLDQAIDAFDGATLSAAERPHLTIEDKALFIFTSGTTGLPKAANINH
                     FRLMLASNAFAGVMNTGPDDCMYDCLPMYHTSGGVLAIGAALIGGGTVFIREKFSARE
                     FWDDVLRHRCTLFMYIGELCRYLVNCPPHPQERAHRLRLCCGNGLRPDIWTQFQSRFA
                     IPSILEFYAATEGNITLFNFEGKPGAVGRIPWFLTRRFQTKIVRFDMEAQAPTRSSLG
                     HCEEVAPGEIGEAVGRIFQDPSKPTGRFEGYSNAADNETKILRDVFVNGDSWFRSGDL
                     MRRDRDGYFYFVDRIGDTYRWKGENVSTTEVSEVICVFAGIQEANVYGVEVPGREGRA
                     GMAAIVCDPDFNLAAFRSYLSAHLPEYARPLFLRIRGEIDVTATFKQRKISLVKDGFD
                     PSPIRDAIFFDDPRVQAYVRLDDVLYRQIVSGEVRL"
     gene            2781..3347
                     /locus_tag="VLJ17_15040"
     CDS             2781..3347
                     /locus_tag="VLJ17_15040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF924 family protein"
                     /protein_id="HSV24330.1"
                     /translation="MTAPHQDLPLPSADEVLAYWRALGPKRWFVQDAAIDAEIRDKFR
                     NLHAAAIEGLLRHWEDNAACALAHVIVLDQFPRNMFRGSAAAFAADPLARAAAGRAID
                     RGFDRQTAKVERPFFYLPYMHSEMLSDQEHCLELCRAAADTGTLKYAALHADIVRRFG
                     RFPHRNAVLGRVTTPQEQAFLDGGGFAG"
BASE COUNT          620 a         1070 c         1035 g          740 t
ORIGIN      
        1 gccatgatcc caaccgtcat gacgcccata tccgggcatt tgcgctgacc acgccgcagg
       61 ccattccggc cggcgccttt gagatgttca tcgagttggt gcgatcgctg cacgggccca
      121 acctgttgag ggtcaagggc gtagtgaagc ttgccgagca tccggatgcg ccggtcgtgg
      181 tccatgccgt ccagcacctc atgcacccgg ctgcgcggtt ggaacgctgg cctgacgatg
      241 atcacagcac ccgcatagtc tttatcgtgc gcgatatgga gccgcgcgcg atcaccgagc
      301 ttttcagtgc ttttttgggc accagtgcgc ccgatcgacc cgacctcgcc gcgattgccg
      361 acaatcccct tgtgccgttc ggcggcatcg atcgctgagc gagcttggcg gaggtgcccc
      421 catcctcgac agcttctgga gcgacatcaa ccgcaatttc ggttacaatt gcgtacgggc
      481 cgcaagcgag agcgcgggcc tgaaatgtcc accggcctca acaatattca cgatcagcgg
      541 gagttcattg aacggtcagc gacatttgat gtctcagcgc catcaggtcc ttttggtatc
      601 tctggagcga tcacgacgac atcgtccgga aagcgtaatt tggtttgtgc ggcgccttgc
      661 gtacttgccg gatgacgatc tcgccgatcg agtcgcaccg accgagtcag agggcttttt
      721 gacgtcgata acatccctcc atacaatgac ctgggcgtgg atggttccaa atgtcagaac
      781 gttcgaggga tggcgcaaag ggtgaaatcg acgcaaacta ttcggtcgct tgggtgcagc
      841 cagatttcat tgagcttgcg agtggcggag tcgatgtaaa tcccgaggga tgcatcttgt
      901 ggcttgacac gatgacgagt tcgtgcggtc gcttcggcgc ctgagttttc tttcttgacg
      961 cgcgttcgcg gggccatgaa attttccaag cgcttgcagg gcgatctcat gtttctgcgc
     1021 ggtgcgttgc gcaccatccg gcgcacctcg ccgatcgcca ggaatccaac gcgcattttc
     1081 ccgttgatgg tcgatgaatt ggcggcgcgc catggcgaca aaccggcgct catctcggat
     1141 cgcgagagcc tgacttaccg ggcgctcgcc gaacgctcct gccgttatgc gcgctgggct
     1201 gtggcacaag ggcttgacaa gggcgacgtg gttgcgttgc tgatgacgaa ccggcccgaa
     1261 tatgtggcca tctggctcgg catcatccgg gccggcggca ccgtcgcact cctcaatacc
     1321 aatctggccg gtccgaccct ggcgttctgc atcgatagcg ttgcgccaaa gcacgttatc
     1381 gtggcaggcg aattcgctca ctccttatcg tcggccgact cctatcgcaa gaccacaccg
     1441 cgcatctggc tacacggcga cgcgaaccat ccgcagcagc accatccgcg cctcgatcag
     1501 gcgattgatg cgttcgacgg cgcgacgctg tcggctgcgg agcgccctca cctcactatc
     1561 gaggacaaag cgctgttcat cttcacctcc ggtaccaccg gcctacccaa ggccgccaac
     1621 atcaatcatt tccggctcat gctggcgagc aacgccttcg cgggtgtgat gaataccggc
     1681 ccggacgact gcatgtatga ctgcctgccg atgtatcaca ccagcggcgg cgtgctggcg
     1741 atcggtgcgg ctttgatcgg cggcggcacc gttttcatcc gcgaaaaatt ttccgcgcgc
     1801 gaattctggg acgacgtgct gcgccaccgg tgcacgctct ttatgtatat cggcgagttg
     1861 tgccgctatc tcgtcaactg cccaccccac ccgcaagagc gcgcccatcg gctgcggcta
     1921 tgctgtggca acgggctgcg gcccgacatc tggacgcaat tccagtcgcg cttcgcaatt
     1981 ccgtcgatcc ttgagttcta tgcggcgacc gagggcaata tcacgctgtt caatttcgaa
     2041 ggaaagcccg gtgcggtcgg tcgcattccg tggtttttga cgcggcggtt tcaaaccaag
     2101 atcgtgcgtt tcgatatgga agcgcaggcg cccacacgca gttcgcttgg gcactgtgag
     2161 gaggttgcgc ctggagagat tggcgaggcg gtcggtcgga ttttccagga cccgtcgaag
     2221 ccgaccggcc gattcgaggg ctactccaac gcggccgaca atgagaccaa gatcctgcgc
     2281 gacgtatttg tcaacggcga ttcctggttc cgctccggcg atctcatgcg ccgtgaccgc
     2341 gatggctatt tctacttcgt cgaccgtatc ggtgatacct accgctggaa gggcgaaaac
     2401 gtatcgacca ccgaggtttc ggaggtgatt tgcgtatttg cagggattca ggaggccaat
     2461 gtctacggcg tggaggtgcc gggccgtgag ggccgcgccg gcatggcagc gatcgtgtgc
     2521 gatcccgatt tcaatctcgc ggcgttccga tcgtatttat cggcacatct accggagtat
     2581 gcgcgcccgc tgttcctgcg cattcgcggc gagatcgacg tcaccgcaac tttcaagcag
     2641 cggaaaatca gcctggtgaa ggacggcttc gatccgtcgc cgattaggga cgcgatcttt
     2701 tttgatgatc cgcgcgtaca ggcgtatgtg cgcctggacg atgtgcttta taggcagatc
     2761 gtgtccggag aggtgaggtt gtgacagccc cccatcaaga tttgccactg ccatccgccg
     2821 acgaagtgct ggcttattgg cgcgccctcg gtccgaagcg atggttcgtg caggacgccg
     2881 ccattgacgc tgaaatccgt gacaaattcc gcaatctcca cgccgccgca atcgaaggcc
     2941 tgctcagaca ttgggaggat aacgcagcct gcgcgctggc ccacgtcatt gtgctcgacc
     3001 agtttccgcg caacatgttc cgcggcagtg ccgcggcgtt cgcggccgat ccactcgccc
     3061 gcgccgccgc tggccgcgcg atcgaccgcg gtttcgaccg gcagaccgcc aaggtagagc
     3121 gaccgttctt ctatctcccc tacatgcatt cggagatgct ttcggaccag gagcattgct
     3181 tggagctttg ccgggccgcg gcggataccg gtaccctcaa atatgctgcg cttcacgccg
     3241 acatcgtccg gcgcttcggc cgctttccgc atcgcaacgc ggtgctcggc cgcgtcacca
     3301 cgccgcagga gcaggcgttt ttggatgggg gtggatttgc cggataagcg cagacccacg
     3361 ccttcctttc acggcgtttt cccctatctg gtctcgcctg tcgaccacaa gggccacgtc
     3421 aagaccgatg ttctcgcccg tctcgtggac gatctcatcg tcgcg
//
LOCUS       DATILV010000638         7485 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1173332, whole genome shotgun sequence.
ACCESSION   DATILV010000638 DATILV010000000
VERSION     DATILV010000638.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7485
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1173332"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            322..621
                     /locus_tag="VLJ17_15045"
     CDS             322..621
                     /locus_tag="VLJ17_15045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24331.1"
                     /translation="MRNHNRCILGCIMDGTLYQVVAALISVMLIAIICYFWNDPDHWR
                     KFKKESTTPSIGLMADHQHPPNVAPFPLRTQSRRDDAAMALERVAEHGLSVGSEC"
     gene            717..866
                     /locus_tag="VLJ17_15050"
     CDS             717..866
                     /locus_tag="VLJ17_15050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24332.1"
                     /translation="MSISTRTPLGLCRDEIVTNVRNGIQASLMTPSEKAEAFAQINDI
                     LATIA"
     gene            complement(1227..1303)
                     /locus_tag="VLJ17_15055"
     tRNA            complement(1227..1303)
                     /locus_tag="VLJ17_15055"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1267..1269),aa:Arg,seq:ccg)
     gene            1626..2315
                     /locus_tag="VLJ17_15060"
     CDS             1626..2315
                     /locus_tag="VLJ17_15060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009338186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018784 - (S)-2-haloacid dehalogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006805 - xenobiotic metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="haloacid dehalogenase type II"
                     /protein_id="HSV24333.1"
                     /translation="MPNRPLSGISACVFDAYGTLFDFASAARSCTDVLGDAVERVSAL
                     WRDKQLQYTWLRVAQGRHADFWQVTGDALDFTLETLGLELPGLRERLMRLYLALAPFP
                     EVPGVLAALRRAGLKTAILSNGTPKMLDAAVGGAGLGAMFDAVLSVEEVGVFKPDPRV
                     YQLAVNRLGCPAATIAFQSSNAWDAFAASAFGMQVVWCNRYGQRRERLPGAPDCEIAT
                     LAELPALVGAA"
     gene            complement(2336..4327)
                     /locus_tag="VLJ17_15065"
     CDS             complement(2336..4327)
                     /locus_tag="VLJ17_15065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013214262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein meaA"
                     /protein_id="HSV24334.1"
                     /translation="MTKPSDGAVLRRDNPWIIRTYAGHSTAAESNALYRKNLAKGQTG
                     LSVAFDLPTQTGYDADHPLARGEVGKVGVSICHLGDMRALFDQIPLGAMNTSMTINAT
                     AAWLLALYIAVADEQGAARRDLQGTTQNDIIKEYLSRGTYVFPPGPSIRLTRDVILFT
                     TRELPKWNPMNVCSYHLQEAGATPVQEVAYALATAIAILDAVKATSDLSAEQFGAVVG
                     RISFFVNAGLRFITELCKMRAFAELWDEITADRYDVTDAKQRLFRYGVQVNSLGLTEQ
                     QAENNVYRILIEMLAVTLSKKARARAVQLPAWNEALGLPRPWDQQWSLRMQQILAYET
                     DLLEYDDIFAGSVEIETKVAALKRETREELENILRMGGAVAAVENSYMKSQLVESNAR
                     RFEAIERGEQIVVGVNRFTETEPSPLAAGEGAILTVPPEVETGQIAKLQAWRAGRDVA
                     AVGAALAELRRAAQAGRNIMEASIACAKAGVTTGEWGEVLRQGFGEYRAPTGVSHAAR
                     NDCRGIDDLRAEVDRVTRRLGRRPKILVGKPGLDGHSNGAEQVAVRARDAGMDVVYDG
                     IRLTPAEIVDAARDKDVHVVGLSILSGSHIPLVKDVVRRLRNAGLDDVPVVVGGIIPP
                     DDAAALKQSGVAAVYTPKDFQLNRMMSDVLRIVERCKAG"
     gene            complement(4452..4703)
                     /locus_tag="VLJ17_15070"
     CDS             complement(4452..4703)
                     /locus_tag="VLJ17_15070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HSV24335.1"
                     /translation="MQEGLIVALVIGVIAGWLAGKILKGTGFGLIGDLIVGVIGSYIG
                     GWLWDVLRLPPVDGFWITAIVSSTVGAIVLLVLLRLIRS"
     gene            complement(5740..5874)
                     /locus_tag="VLJ17_15075"
     CDS             complement(5740..5874)
                     /locus_tag="VLJ17_15075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24336.1"
                     /translation="MSQIDTYLPAPPPHTIRRVLELVSFGLALAYVLFLADSAILGIG
                     "
     gene            6053..7330
                     /gene="ccrA"
                     /locus_tag="VLJ17_15080"
     CDS             6053..7330
                     /gene="ccrA"
                     /locus_tag="VLJ17_15080"
                     /EC_number="1.3.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012452301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043880 - crotonyl-CoA reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crotonyl-CoA carboxylase/reductase"
                     /protein_id="HSV24337.1"
                     /translation="MPAVVELKPASAAKDLYAIGEIPPVGHVPAKMHAWVIRKERHGP
                     PRTSMQLEVLPTWTIGEDEVLVYVMAGGVNYNGIWAALGTPISPLDVHKNPYHIAGSD
                     AAGMVWAVGKKVRRWKVGEEVIVHCNQDDGDDEDCNGGDPMLSPSQRIWGYETPDGSF
                     AQFCRVQSRQLMPKPKHLTWEESASYTLTLATAYRMLFGHPPHTLKPGDNVLVWGGSG
                     GLGVFGLQLCAASGANAIGVISDESKRQYVLELGAKGVINRKDFNCWGQMPKVGTAEY
                     DGWVKEARKFGKAIWDITGKHDVDTVFEHPGEQTFPVSCLVVKRGGMVVFCAGTSGYN
                     LTFDARYVWMRQKRIQGSHFAHLKQASAANQFVLDRRIDPCMSDVFTWDNIPLAHEMM
                     WKNQHKPGNMAVLVNSPRPGLRNFEDVVEAAVK"
BASE COUNT         1454 a         2343 c         2276 g         1412 t
ORIGIN      
        1 ccaatcgtac tgctcagcgc gatcctcgta gtggttgcat gccgatccct cggccgccca
       61 ccactctagg ccgcggcgac aattggactg tggccgctcg acgactttca ccgtatcgct
      121 cgagggcatc accgacacgc acgctgccgg cattcacgaa tttttgcacg accaaccact
      181 atcgagcgcg agcgggccgc aattcctaca acgcgattgt actgcatctg ccacgaacaa
      241 cccgctcaaa aatctaatga tcctcaatgc ccctccctta cccgacgccc cttctgcgag
      301 tcagctctcg cggacaaggt tatgaggaac cacaacaggt gcatattggg ctgcatcatg
      361 gatggcacgc tctatcaagt cgtggcagcg ctgatcagcg tcatgctgat agctattatt
      421 tgctatttct ggaacgatcc cgatcactgg aggaaattca aaaaagaatc aacgacgcct
      481 tcgatcggtc taatggcgga ccaccagcat ccgcctaacg ttgccccatt tcccctgcgg
      541 acgcagtcgc gtcgggatga tgcagcgatg gcgcttgaac gcgtcgcgga acatgggctg
      601 tcggtcgggt cggaatgcta agcgtggtcg gattgtcctg gtgatcgtcc cgtatgggcc
      661 ggttgcgcct gccggagccc aggcatctcc cagggcaggc gcttccgcgg tatcgggtgt
      721 ccatctcgac gcggacgccg ttgggacttt gtcgcgacga gatcgtcacg aatgttcgca
      781 acggaattca ggcttcgctg atgacaccat cggaaaaggc cgaggcattc gcgcagatca
      841 atgacatcct cgccacgatc gcatgagccc tactggaacc gttgcccttt tccgggacga
      901 acccccgtgt tagatggctc tctcggagag attcgaacac acgaaacgcc ctcgttgcca
      961 atgatgcatg cgcattcagg acatggccgc gccttcacgc ggcgcgtctc cagtagcaaa
     1021 ataccgcgcc atccatagtg ggtaacgcga tgtagcggac ctccgttttg aactccgaat
     1081 tccggtctcc aagtttccgc gccacccagc caatgtgggg agaaggccgc cgatgacgcg
     1141 ccaatgcttg cattttaatg gtgagtttat ggtgagtttg gcctttgccc gcttcaagcc
     1201 aacttttcat aaatccttga ttttgctggc gcgcccggcg tgattcgaac acacgacctt
     1261 tgccttcgga gggcaacgct ctatccagct gagctacggg cgcactgcca gtttcaatac
     1321 ctgatcgacg gacccggggc aacgggccgc ctgggtgctc catattccaa gggaatcggg
     1381 tgaaatgcgg caatgaggct tgcgacgtcg ccatttccca ggcgggcgac cttgtgttga
     1441 agaagcagga aatcctcaaa tccgggctgc tggcgggtgc ccttgaccag atcgcgtcac
     1501 tcgatccaat gcttaagtca tcccggctgg ccgcgatatc cgccagcgtc gcgccgcttt
     1561 tcggcgttcg gtgccgcgtg gggaaagccc cgcgaaatgc ggccagcagg aggagcctgc
     1621 aacacatgcc aaatcgtccg ctctccggca tcagcgcctg cgtgttcgac gcgtacggga
     1681 ccctcttcga ttttgcgtcc gcagcgcggt cgtgcaccga tgtgctgggc gatgcggtcg
     1741 agcgcgtcag cgctctgtgg cgcgacaagc agctgcaata cacgtggctg cgtgtcgccc
     1801 agggccggca cgcggatttc tggcaggtga ccggcgacgc cctcgacttc acgctggaaa
     1861 ccctcggcct cgagctgcct gggctgcgcg agcgcctgat gaggctctat ctcgcgctcg
     1921 cgccgttccc agaggtgccg ggcgtgcttg ctgcgctgcg ccgtgcgggc ctgaagaccg
     1981 cgatcctgtc gaacggtacc cccaaaatgc tcgacgccgc ggtcggaggc gccggactcg
     2041 gcgccatgtt cgatgccgta ctgtctgtcg aggaagtggg cgtcttcaag cccgaccctc
     2101 gcgtctatca gctggctgtc aatcggctcg ggtgtccggc ggctacaatc gcgttccaat
     2161 cctcgaatgc gtgggacgcc ttcgcggcgt cggccttcgg tatgcaggtg gtgtggtgca
     2221 atcgctacgg ccagcggcgc gagcggttgc cgggcgctcc cgactgcgag atcgcaacgc
     2281 tcgccgaatt gccggcgctg gttggtgcag cttagttcct tgaggagctg tgagtttacc
     2341 ccgctttgca gcgttccaca atccgcagca cgtcgctcat catccggttg agctggaaat
     2401 ccttcggggt atagacggcg gcgacgccgg attgcttgag tgcggcggca tcgtcgggcg
     2461 gaatgatgcc gccgaccacg accggcacgt cgtcaaggcc ggcgttacgc aggcgcctca
     2521 ccacgtcctt gaccaacggt atgtgcgaac cggataggat cgacaggccg acgacgtgca
     2581 catctttgtc gcgggcggcg tcgacgattt ccgccggggt taaacggatg ccgtcataga
     2641 ccacgtccat gcccgcgtcg cgcgcccgca ccgccacctg ttcggcaccg ttggagtggc
     2701 cgtcgagccc gggtttgccg accaggattt tcggccgccg tccgagcctg cgcgtcacgc
     2761 ggtcgacctc ggcgcgcaga tcgtcgatgc cccggcagtc attgcgcgcc gcgtgtgaaa
     2821 cgcccgtcgg ggcgcggtat tcgccgaacc cttggcgcaa cacttcgccc cattccccag
     2881 tggtaacgcc cgctttggcg catgcgatcg acgcctccat gatattgcgg ccggcctgcg
     2941 cggcgcgccg cagctcggcg agcgcggccc ccacagccgc gacatcccgc ccggcgcgcc
     3001 acgcctgcaa tttagcgatc tggccggtct cgacctcggg cggcaccgtg aggatggcgc
     3061 cctcgccggc cgcgagcgga gagggctcgg tctcggtgaa tcggttgaca ccgaccacaa
     3121 tctgctcgcc gcgctcgatc gcctcgaacc ggcgggcatt gctctcgaca agctgtgatt
     3181 tcatgtagct gttttcgacc gccgcaaccg caccgcccat gcgcaggatg ttttccagct
     3241 cctcgcgggt ttcgcgcttg agcgccgcta ccttggtctc gatctcgacc gaaccggcaa
     3301 agatatcatc gtattccagc aggtcggttt cataggcgag aatctgctgc atgcgcagcg
     3361 accattgctg atcccacggc cgcggcaggc cgagagcctc gttccaggct gggagttgca
     3421 ccgcgcgggc gcgagccttc ttagacagtg tgacggccag catctcgata aggatgcggt
     3481 agacattgtt ctccgcctgc tgctcggtga ggccaagcga gttgacttgc acgccgtacc
     3541 ggaagaggcg ctgcttggca tcggtgacgt cgtaacgatc ggccgtgatc tcgtcccaaa
     3601 gctccgcaaa ggcgcgcatc ttgcacagtt cggtgataaa tcgcaggccc gcattgacga
     3661 agaatgagat gcggccgacg accgcgccga actgctccgc ggaaaggtcg ctagttgctt
     3721 tcacagcatc aagtatcgcg atcgcggtgg cgagcgcgta ggcgacttcc tgcaccggtg
     3781 tcgcgccggc ttcctgcaag tgataggagc acacattcat cgggttccat tttggcagtt
     3841 ctcgggtggt gaataagatc acgtccctgg tcagccgtat ggaggggccg ggcggaaaca
     3901 cgtaggtgcc gcgcgagaga tattccttga tgatgtcgtt ctgggtggtg ccctgcaaat
     3961 cgcggcgcgc tgcgccttgc tcatcggcaa ccgcgatgta gagcgcgagc agccaagccg
     4021 cagtggcgtt gatggtcatg gaagtgttca tagcgccgag cggaatttgg tcgaacagcg
     4081 cgcgcatgtc gccgagatgg cagattgaaa ccccgacctt gcccacttcg ccacgggcaa
     4141 gcggatggtc ggcatcgtag ccggtctggg tcggcagatc gaaagcgacg gacaggccgg
     4201 tctggccttt ggcgagattt ttccgataca gtgcgttcga ctcggcggcg gtcgaatgcc
     4261 cagcgtaggt gcgaataatc caagggttgt cgcgcctgag caccgcacca tccgaaggct
     4321 tggtcatcct ggcgtctcgc atgcccgtga ttgtgcaatg caacacgatc gcaaccgccg
     4381 aagcaagcga aatttgccgg atcggcgaac ccaggccccg gacggtccgt cctcggacga
     4441 tgtgaagcgc ttcagcttct gatcaatcgc agcaggacca acaacacgat tgcgccaacc
     4501 gtcgaactca caatggcggt gatccagaag ccgtcgaccg gtggaagacg gagcacgtcc
     4561 cacagccagc cgccaatgta actgccgatg acgcccacga taagatcgcc aatcaggcca
     4621 aagccggtgc ccttcaggat ttttccggcc agccagccag cgatcacgcc gatcaccagc
     4681 gcgacaatca atccctcctg cattggatac cctccccccg caagctagct ccagctgact
     4741 cgccgaatat gatgacaatg gtcgaaattg cggcattctt ggggtcggcg cgccacagcg
     4801 gttccgtgcg cgccaaaggc gctgcgcgac ggttgtcttc acacgtcgtg caatcacggc
     4861 ggcgccgatt acggccgccg caaaatccgt cggcacggca aggaatggaa acgccagaac
     4921 aagtcccgag gctgcggccg tgcccgtcaa ctcatagggc agaaaacctt cgcgcagccc
     4981 gagccgcagc agaaaggcaa gtgggattgc cagcacaggg aaatcgtaga tatagagata
     5041 aggcgtcgcc aatagtgccc caaccgcaag tgcagcagcc ttgatctcat agctcgccgc
     5101 tcggcgccaa agcacggcca cagcgaccgt gctgacggaa atcagcaccc cttgtacgat
     5161 ccaggccgct gacatgccgc ctccgagcca acgcactacg cccaataggc tttgcagctt
     5221 gttgagaccg gcgcggccat cgtcaaacac ggccgcgctt gttaccggca tcgaggccac
     5281 aaaggcctgc caactttccg ctccgaaagc cgagaacgag gctacgccga gggccgccgc
     5341 ggttgcggtt gcggccgcga tcacatgcca acgcctgtcg cgagcaagga caagcggaaa
     5401 caggatgccg aactgcggct tataggtgag tggacccaaa cagattccgg cgacagccgc
     5461 ccgccgctcc atctgcccca gcacggcgcc gatcagtgcc gctgtcaaaa agccgttctg
     5521 tccgaccgag acattccaaa ctacgcccgg gaacgcacat gaatgtgggc ggatagtgcc
     5581 agccgtaata gcctgtgaaa ttgtgttcga gtgccgcaac ctcggcttcg cgatggacgg
     5641 tccacacgta cgcggcagca ggctggctcg cgagcgcgag cttgccggca gcccacacat
     5701 tgacaaagtc gttgccgata gcgtggccgg catcgtcgat cagccaatac cgagaatggc
     5761 ggaatcggcg agaaacagca cataggcgag ggccagacca aagctgacca attccagcac
     5821 acggcggatt gtgtgcggcg ggggcgccgg cagatacgta tcgatttggg acatcgcttc
     5881 accggccggc gtgatgccgc cgcgccatca tcgaaacttt tatttgcgaa actcttaaga
     5941 agacaacgga atctcgtccc gtttcgaaat atgttgcgct gcagcatcca atacggcata
     6001 gtgattgctt gagacggggg cacacgtccc gcgccatgcc cggaggctcc caatgccggc
     6061 cgtcgtcgag ttgaagcctg cttccgccgc gaaagatctt tacgccatcg gggagatccc
     6121 gccggtcggc cacgtgccgg caaaaatgca cgcctgggtg atccgaaagg agcgccatgg
     6181 cccgccgagg acgtcgatgc aactcgaagt tctgccgact tggaccatcg gcgaagacga
     6241 agtgctggtc tacgtcatgg ccggaggggt caactacaac ggcatctggg ccgcgctcgg
     6301 caccccgatt tctccgctcg acgttcacaa gaacccttac cacatcgctg ggtctgatgc
     6361 ggccggtatg gtgtgggcgg tgggcaaaaa ggtccgacgc tggaaggtcg gtgaggaggt
     6421 catcgtccat tgcaatcagg acgacggcga cgacgaggac tgtaacggtg gcgatccgat
     6481 gttgtccccg tcccagcgta tctggggcta tgagaccccg gatggttcgt tcgcccaatt
     6541 ctgccgggtg cagtcgcgcc agttgatgcc caaacccaag catctcacct gggaggaatc
     6601 agcctcctat acgctgacgc tcgcgaccgc ttaccgcatg ctgttcggac atccgccgca
     6661 caccctcaaa cccggcgaca acgtgctggt ttggggtggc tccggcggtc ttggggtgtt
     6721 cggcctgcag ctctgcgccg catcgggcgc caacgccatt ggagtcatct cggacgagag
     6781 caagcgccaa tatgtgctcg aactcggggc caagggtgtc atcaatcgca aggatttcaa
     6841 ctgctggggc cagatgccga aggtgggcac cgcagagtac gacggctggg tgaaggaggc
     6901 acgcaaattc ggcaaggcga tctgggatat caccggcaag cacgatgtcg acacggtgtt
     6961 cgagcatccg ggcgagcaaa cttttccggt gtcatgcctt gtggtcaagc gcggcggcat
     7021 ggtggtgttc tgcgccggta ccagcggcta caacctcacc ttcgacgcgc gctatgtgtg
     7081 gatgcgccag aagcgaatcc agggctctca cttcgcccat ctcaagcagg caagcgctgc
     7141 caaccagttt gtgctcgacc gccgcatcga tccgtgcatg agcgacgttt tcacctggga
     7201 taacatccct cttgctcatg agatgatgtg gaaaaaccag cacaagcccg gcaacatggc
     7261 ggtcctggtc aattcgccgc ggccgggcct gcgcaatttc gaggacgtgg tggaggcggc
     7321 ggtgaagtag aaaacgcgcc cgagagcgaa tttgccgcag cggatgcgat cacgtttttt
     7381 gcgttatcgt cgatttccat gtcaatccga gcgccggcgt gaggacaatc acagcctggc
     7441 cgtgattgtc cgcgccctcc taatcgcttg gttcaactcg ccgcc
//
LOCUS       DATILV010000639         3043 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2710831, whole genome shotgun sequence.
ACCESSION   DATILV010000639 DATILV010000000
VERSION     DATILV010000639.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3043
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2710831"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            177..575
                     /locus_tag="VLJ17_15085"
     CDS             177..575
                     /locus_tag="VLJ17_15085"
                     /inference="COORDINATES: protein motif:HMM:NF015898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HSV24338.1"
                     /translation="MKEPRLSKAETRILEQYWKLGTASVREVLESLPQDERVAYTTVQ
                     TLVYRLEEKGALRKVKKIGNAQLFEPAINQSQYRGRLVRDLLDLFGGSPRLLVSNLLE
                     NGTLSLRDLKALQSATRTDKNGRGRGGKRA"
     gene            568..1497
                     /locus_tag="VLJ17_15090"
     CDS             568..1497
                     /locus_tag="VLJ17_15090"
                     /inference="COORDINATES: protein motif:HMM:NF017390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M56 family metallopeptidase"
                     /protein_id="HSV24339.1"
                     /translation="MHEHIARVMYYFSVHLLYASVVGAAAWVLTSIRGASATTKYWIW
                     VVTAFNFIVPAGAIIDRVWALHLRWAAPLSALGGPIWDMTQGRAAVVLAAIWIAGTFV
                     MLMRLISRLRREGREAQLAHSLSINDAASGFITDGIPVSFDARHRAPAVVGIFYPCIL
                     LPIGIDRVLNQREFDAVLLHELAHARRRDNLIRLLYELSLCALWFHPLIWLAGARMLL
                     YRELSCDESVIQRAHGTDLVRALAKLAITERALSLQATASSHLSHRLAWLSGQLQARR
                     AASLALASLFAAVTAAGVFGTVAHTACCFIPQH"
     gene            complement(1740..1958)
                     /locus_tag="VLJ17_15095"
     CDS             complement(1740..1958)
                     /locus_tag="VLJ17_15095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24340.1"
                     /translation="MAIHLRFGRHNDVKEQVRVGVDQPWKERRTAEIDCVSAGRSADL
                     RCRANLLDLVPFDQNGGRREYIPGARIE"
     gene            1929..2993
                     /locus_tag="VLJ17_15100"
     CDS             1929..2993
                     /locus_tag="VLJ17_15100"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV24341.1"
                     /translation="MPPEAEMDRHSNGLFAPGLLLAIVESPSKRALMAAQLAREDLES
                     GITTVRNLGHSGVDGDTELRDAINAGRVPGPRMLASGRKLITQGEYLQNLNPVLTDAI
                     LQQEFLLIEGADRGRQAVRLNEFQTVDVIKVSADENLTVPELAAVVEEAHRQHLKVAV
                     HAIATASIQTAIDAGADSIEHGNDVTDEQLRQMRDKGIYFDLTPTFYGGGYLKFAEPV
                     IVVSPRARAERLSSAARSKERYDQLVQRVMRSGVKFAAGSDMCWFYPGKTRGEASITV
                     LLNLRAAGMSSLETIRAITSNAAEMLGWQDRIGAIEPGKFADLIAVAGDPVADITELE
                     HVRFVMKSGEVIRSSVAQPR"
BASE COUNT          641 a          871 c          878 g          653 t
ORIGIN      
        1 gttatgacat cacccggaag tcagcgatta cttcttgttt gccgaccatt cgggagttga
       61 tcgccacgat agcatttatc gatactcgaa ccacacgctc atctccgatc agaaagacgc
      121 agggatagtc accatgccgt ctcttgtagt agcattgccg gggtgagtag gagattatga
      181 aagaaccgcg tctttccaaa gccgaaactc gcatcctgga acagtactgg aaactgggaa
      241 ctgcgtccgt gcgcgaggtg ttggaaagcc tgcctcaaga cgaacgtgtc gcttacacaa
      301 ccgtgcaaac gctcgtctat aggcttgagg agaaaggcgc gttgaggaag gtaaagaaga
      361 ttggcaacgc ccagctcttt gagcccgcta tcaatcagag ccaataccgc ggcaggctcg
      421 tacgcgactt gctggatctc tttggagggt cgccgcgtct tctcgtctcc aatctgctcg
      481 agaatggcac cctcagcttg cgggatctga aggcgctgca aagcgcgaca cgaactgata
      541 agaacggccg cggccgtgga ggcaaacgtg catgagcata tcgcacgcgt gatgtactac
      601 ttcagcgtcc acctgttgta tgcatccgtc gtcggtgctg ccgcgtgggt attgacgtca
      661 attcggggtg ccagcgccac cacaaaatat tggatttggg ttgtcaccgc attcaatttc
      721 atcgtaccgg ccggtgcaat cattgatagg gtctgggcgc tgcatttgcg atgggcagca
      781 ccgctcagcg ctctcggtgg gccgatatgg gacatgacgc aaggccgtgc ggccgtggtg
      841 cttgccgcga tatggatagc tggcacattc gtcatgctaa tgcggttgat ctcgcgcctt
      901 cgcagagaag gccgcgaagc tcaactcgcg cacagcctga gcatcaatga tgcggcgtct
      961 ggtttcataa cagatggcat cccggtgagc ttcgacgcca ggcatcgcgc tcccgcggtc
     1021 gttggcatct tttacccatg tatcttgctc cccattggca tcgaccgggt gctcaatcag
     1081 cgggaattcg atgctgtcct gcttcacgaa ctcgcccacg caagaaggcg cgataatctg
     1141 attcgcttac tctacgaact ttcgttgtgc gccttatggt tccatccgct catctggctg
     1201 gcgggagcga gaatgttgct ctatcgcgaa ctctcctgcg atgaatctgt catccagcgt
     1261 gcgcatggaa cagatctggt tcgagcgctt gcaaaacttg caatcactga acgagcgctt
     1321 tcccttcaag cgacagcctc gtcacatctg agccaccgct tggcctggct gtcgggccag
     1381 ctgcaggcac ggcgcgcagc aagcctggca ctggcgtcgc tatttgccgc tgttacggcg
     1441 gctggcgtct ttgggaccgt cgctcatacc gcctgctgtt tcattccgca gcactgactc
     1501 cctgccgaca tcctcgctcc caggcagtaa tattgccgcg gcatagttgc ggcgcaaacg
     1561 tacaatgtag tagcattacc gctatatgta ggagagcaga gccgcctatg tcacaggagc
     1621 cacaaaatcg aatgcgaaac tgcgccgcac ttttgccgtt attgctggtg gcgcagcttt
     1681 cgacgctgca actgcgcgcc caatcggctg ctccggtcac tctggtcaaa gccgcccggc
     1741 tactcgatcc gcgcaccggg aatgtactcg cgcctgccgc cgttctgatc gaagggaaca
     1801 agatcaagca gattggcccg gcatcgcaaa tcagcactcc tgccggcgct aacacaatcg
     1861 atctcggcag tgcgacgctc cttccagggc tgatcgacgc ccactcgcac ctgttccttg
     1921 acatcattgt gccgcccgaa gcggagatgg atcgccattc caacggactg tttgctccgg
     1981 ggttgctgct ggccatcgtc gaatcaccaa gcaagcgcgc gctcatggcc gctcagttgg
     2041 cccgcgagga tctggagagc ggaattacga cggttcgcaa tcttggtcat tcgggcgttg
     2101 acggcgatac tgaactgcgt gacgcgatta atgcaggccg cgttcccggg ccgagaatgc
     2161 tggcctccgg acgcaagctg ataacgcaag gtgaatacct tcaaaatctc aatcctgtcc
     2221 ttaccgatgc catcctgcag caggaattct tgctcatcga gggggcagac cggggacggc
     2281 aggcggttcg gctgaatgag ttccagaccg tcgacgtgat caaggtctcg gccgatgaga
     2341 atctcacagt tcctgaactc gcggcggtag tggaagaggc gcaccgccag cacctaaagg
     2401 tggcggtcca cgccatcgcc actgccagca tacaaacggc gatcgacgcc ggcgcagatt
     2461 cgatcgaaca cggcaacgat gtaaccgacg aacagctcag gcagatgcgt gacaagggca
     2521 tctatttcga cctgactccg actttttatg gcggcggcta cttgaagttc gccgagccag
     2581 tcattgtggt ctcgccccgc gcccgcgccg aaagattgag ttccgcagca cgcagcaaag
     2641 aacgttacga tcagctggtg cagcgagtca tgaggtccgg agtcaaattt gctgcgggat
     2701 cggacatgtg ctggttctat cccggcaaaa cgcgcggcga agcgagcatt acggttttgc
     2761 ttaatttgcg cgctgccggc atgtcgtcgc tcgaaaccat tcgcgcaatc acaagcaatg
     2821 ccgcggaaat gctgggatgg caggaccgca tcggcgctat cgagccgggc aagtttgccg
     2881 atctgatcgc cgttgctggg gaccccgtcg ctgatatcac cgagttggag catgttcggt
     2941 ttgtgatgaa aagcggcgaa gtaatcagaa gtagcgttgc acagccccgg taaacggtgc
     3001 tggggagagt ggaatgagga aacgtctgtg cgtgttttta ctg
//
LOCUS       DATILV010000640         4237 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_923405, whole genome shotgun sequence.
ACCESSION   DATILV010000640 DATILV010000000
VERSION     DATILV010000640.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4237)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4237)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4237
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_923405"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(21..317)
                     /locus_tag="VLJ17_15105"
     CDS             complement(21..317)
                     /locus_tag="VLJ17_15105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24342.1"
                     /translation="MSDMAVEDRDIELQDRVLFALSECRDALLAIWRPSTQERHSEAR
                     KLRVERALNRAKSALSEAQQAGWELPSLDESSDAVTVARHYARVLSRRVEREAS"
     gene            complement(314..553)
                     /locus_tag="VLJ17_15110"
     CDS             complement(314..553)
                     /locus_tag="VLJ17_15110"
                     /inference="COORDINATES: protein motif:HMM:NF013540.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSV24343.1"
                     /translation="MRDPKPIERIRKTIFDLNQEEFGKLAGTTQASVSRWETGQQEPS
                     ISEMERIRAAAVERGLPWDDRWFFEPVPPEVRVVA"
     gene            1054..1284
                     /locus_tag="VLJ17_15115"
     CDS             1054..1284
                     /locus_tag="VLJ17_15115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24344.1"
                     /translation="MPATARQLYQAPTGCILVGVGERFIAKDGDRWFIMQNYDYEDRE
                     GYMGCSTEILGDPHGYETEEAAEAALAGKVAP"
     gene            1412..1891
                     /locus_tag="VLJ17_15120"
     CDS             1412..1891
                     /locus_tag="VLJ17_15120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24345.1"
                     /translation="MQTLRSDLREVAGENCRRARRLPLSTGPHAMTRQPDTELSEFRF
                     TFEELSLVQEGGFEAGLVTGSAQITYWREDGYTEWSVGKIYLEGVRKATAEERANGAG
                     LFVRRDIEIDANPLTDPERKTFASQLYLAIFGQLDGEQSWRDLIECAVSKRLESEAA"
     gene            1891..2094
                     /locus_tag="VLJ17_15125"
     CDS             1891..2094
                     /locus_tag="VLJ17_15125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24346.1"
                     /translation="MPMIPQNPAEERDMALAWSLWRLTHIVKDILEKMPEPKFTADFK
                     RLAEHRQTISKIDDKLHIYFLGD"
     gene            2182..2472
                     /locus_tag="VLJ17_15130"
     CDS             2182..2472
                     /locus_tag="VLJ17_15130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24347.1"
                     /translation="MKVISTKRGSSRERVDAKADLLPVAHWRINWKNADERPGFAKAA
                     SRSLVLSSRSGAERDSELWLTEAEALTIASAVSSDLFSEAAKRATIAKAEGR"
     gene            2472..2621
                     /locus_tag="VLJ17_15135"
     CDS             2472..2621
                     /locus_tag="VLJ17_15135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24348.1"
                     /translation="MSVSRSPHLAEIRRREDQADARKVRNIIAILCALAAFSFVGAVI
                     IMGKW"
     gene            2626..3084
                     /locus_tag="VLJ17_15140"
     CDS             2626..3084
                     /locus_tag="VLJ17_15140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24349.1"
                     /translation="MKPKSKVQLPSTAVGRRRLLKLAGMLEADAKNKNGIKFDLSLWG
                     GAHRPDEPMSCATIGCAMGLAVASGAFAKDGLQPPDSGGRLAPVFRSKGSQDRLYHFD
                     AAAGLFQIERQEAKFLFGYNHYSLPRSVGAHAERAVAKRIRQFVAGKVAP"
     gene            3081..3353
                     /locus_tag="VLJ17_15145"
     CDS             3081..3353
                     /locus_tag="VLJ17_15145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24350.1"
                     /translation="MTQPAHILEPERHDGPSLFTGIQLEVDEITLYRTKINAGCIDLR
                     AAMIARHESGVKQAADEIAKISGQMQTMAAHVASVIARHQARRPRA"
     gene            3350..>4237
                     /locus_tag="VLJ17_15150"
     CDS             3350..>4237
                     /locus_tag="VLJ17_15150"
                     /inference="COORDINATES: protein motif:HMM:NF024096.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease-like domain-containing
                     protein"
                     /protein_id="HSV24351.1"
                     /translation="MITAPGIYADVPMQAYHELVDGKYVPLCDGPSISSSGLRKIFTQ
                     SPAHFWAKAPMNSDRIEEADKKAFVLGRAAHLLLVGQPHFAREFIIRPDTYEDEKTGS
                     EKPWNGNANKCKGWLAAAKQSSKTVLTTDMVEDIKGMAISLGKHPLVRAGILNGLIER
                     SIIFRDKGTGIWVRTRPDSIPTDSGDYADIKTSFEIGEGTEKAMRNFRYDMQAALLRW
                     ACREVGLPFSSFADVFVESTPPYCVDIVTIDTRDLDEAEADCRIALKVFAHCLKSGEW
                     WGPVGTQRDARTAFFSEQFR"
BASE COUNT          913 a         1313 c         1206 g          805 t
ORIGIN      
        1 cccgagattt gcgaggcggg tcatgacgcc tcccgctcca cccttcggct cagcacccgc
       61 gcgtaatggc gggcgaccgt gactgcgtca ctggattcat caaggctcgg cagttcccag
      121 cctgcttgct gcgcttccga aagcgcactc ttggcgcggt ttagagcacg ctcgacgcgc
      181 aactttcgcg cctcactgtg gcgttcctgc gtgcttgggc gccatatcgc gagcaaggca
      241 tcgcgacatt cggacaaggc aaatagaacg cggtcctgca actctatgtc gcgatcctca
      301 acggccatgt cgctcatgcg accactcgca cttccggcgg cactggctca aaaaaccacc
      361 gatcatccca aggcaggccg cgctccacag cggcggcgcg aatgcgctcc atttcgctga
      421 tactcggctc ttgctggccg gtctcccagc gagacacgga ggcttgcgta gttccggcaa
      481 gcttgccgaa ctcttcctgg ttgagatcaa agatggtttt gcggatacgt tcgatgggct
      541 ttgggtcacg catgacgcat aaaatacgcg aacgcatgcg tctgtcaagg gcattatgcg
      601 cgcccgcatt cggtgcacag atggaaccta gataaactct gaaatcttct tacttaccaa
      661 tcccttaagt cttagtctct tcaagccttc ttcttttcaa aaccctgagt tcagaccggg
      721 gtatctgcca aagacccccc taccccccta cggaacttac cgcaggaagg caaaggagcc
      781 ttggcgctca aaacccttga gacgagccgg gtgtagagct gccgccgggc cttgcggttc
      841 cccgacattc cgctagtttc cccagtccgg cacctacgga atcacgaccc cgcgccttgc
      901 cgtcctgact gggagagccg caccccgaag cattggcggc cgaccgacgg cggagccgat
      961 atgccccaaa agaaaaaata cgtcaatgca ttttcatgct tgacagcata tacgttggcg
     1021 tattacaagt ttctctcaac agagggggaa tacatgccag ccacagcccg ccagctctac
     1081 caagctccga ccggatgcat cctcgttggc gtcggcgagc gcttcatcgc caaggacggc
     1141 gaccgttggt tcatcatgca gaactacgac tacgaggatc gcgaaggcta catggggtgt
     1201 tcgaccgaaa ttctcggcga cccgcacggc tacgagactg aggaagcggc cgaagccgcc
     1261 ttggctggga aggtcgcgcc atgaccacca gcaacaccaa caatcgcggc atcatgcatt
     1321 tggttcgccg tttcggcgac acaccagttt gccgctcgcg ccgggcgatc atggccacta
     1381 ctgccgacgc gttcacaacc gatccgaagc catgcaaacg ctgcgcagcg atcttcgcga
     1441 agtggcaggc gaaaactgtc gccgcgcccg ccgcctgccc ctcagcacag gaccgcacgc
     1501 catgacccgc cagcccgaca ccgaactcag cgaattccgc ttcactttcg aggaactgag
     1561 cctcgtccaa gagggcggct ttgaagccgg actcgtcacc ggctccgcgc agatcaccta
     1621 ctggcgcgag gatggctata ccgagtggtc ggtgggcaag atttatctgg agggcgtgcg
     1681 caaggcgacg gcggaggaac gggcgaacgg cgccggcctg ttcgtgcggc gcgacattga
     1741 gattgatgcc aaccccctca ccgaccccga gcgcaagacg ttcgccagcc aactctatct
     1801 cgcgatcttc ggccaactcg atggcgagca aagctggcgc gatttgatcg agtgcgccgt
     1861 gagcaagcgg ctggaaagcg aggcggcgtg atgccgatga tcccgcaaaa tccagccgag
     1921 gaacgggata tggcgcttgc atggtcgctt tggcggctca cgcacatcgt gaaagacatt
     1981 cttgaaaaga tgccagagcc gaaattcaca gccgacttca agagactagc cgaacaccgt
     2041 cagacaatct caaaaatcga cgacaagctg cacatttact ttttgggtga ctgatatggc
     2101 caacaatccg caagtctccg acgcactctc gttcctcgcg ctcgcgatgt tcgtcggcgc
     2161 aatcattttg gtggcgccat aatgaaagtc atcagcacta aacgtggatc gtcccgcgag
     2221 cgcgtggacg caaaggcaga ccttctccct gtcgcccatt ggcgcatcaa ttggaaaaat
     2281 gccgatgaac gacccggttt cgcgaaggcc gctagtcgct ctcttgtttt gtcgtcacgg
     2341 tcaggagcag agcgggattc cgaactatgg ctgaccgaag cagaggcgct caccatcgcg
     2401 agcgctgtat ccagcgatct tttctccgag gccgccaagc gtgccaccat cgccaaagcg
     2461 gagggccgtt gatgtcagtc tctcgctctc cccaccttgc ggaaattcgt cgcagagaag
     2521 atcaagccga cgcgcgcaag gtgcgcaaca tcatcgcaat tctatgcgcg ctcgcggcat
     2581 tcagcttcgt tggcgccgta atcatcatgg ggaaatggtg aggacatgaa accgaaatcc
     2641 aaagtgcagt tgccatcaac cgcggtcgga cgccgcaggt tgttgaagct cgcggggatg
     2701 cttgaagccg acgcaaagaa caagaacggc atcaaattcg acctttccct atggggcggt
     2761 gctcataggc cggacgagcc gatgtcctgc gcgactatcg gttgcgccat gggtctagcg
     2821 gtggcatcgg gcgcttttgc caaagatgga ttacagccgc ctgacagcgg aggtagactt
     2881 gctcccgttt ttaggtccaa aggtagccag gatcgcttat accacttcga tgctgctgcc
     2941 ggtctattcc agatagaacg ccaggaggcg aagtttcttt tcggctataa ccactacagc
     3001 ttgccgcgca gcgtcggcgc ccacgccgag cgcgccgtcg ccaagcgcat ccgccaattc
     3061 gttgcgggca aggtcgcgcc atgacacagc ccgctcacat cctggagccc gagcgtcacg
     3121 acggcccctc gctgttcacc ggaatccagc ttgaggtgga cgaaatcacg ctataccgga
     3181 ccaagatcaa cgcaggctgc atcgaccttc gcgccgcaat gatcgcccgg cacgaatccg
     3241 gcgtgaagca agccgcagac gagatcgcga aaatatcggg gcagatgcag acgatggcgg
     3301 cgcacgttgc gtcagtgatc gcgcgccatc aagcacgtcg gccccgcgca tgatcaccgc
     3361 ccccggcatc tatgcggacg ttccgatgca ggcctatcac gagcttgtgg acgggaagta
     3421 cgtgccgctg tgcgatggcc cgtctatctc gtcatcgggc ctgcgaaaga ttttcacgca
     3481 atcccccgcc cacttttggg cgaaggctcc gatgaattct gatcggattg aggaagccga
     3541 caaaaaggca ttcgttctag gccgcgcggc acatcttcta ctggttggcc agccgcactt
     3601 tgcgcgcgag ttcatcatcc ggccagacac ctatgaggat gaaaagaccg gaagcgagaa
     3661 accatggaac ggcaacgcca acaaatgcaa gggttggctc gctgccgcga agcaatcgag
     3721 caagacggtt ctgaccaccg acatggtgga ggatatcaag ggcatggcca tttctctcgg
     3781 caagcatccc cttgtgcgcg ctggtatcct gaatgggctg atcgagcgca gcatcatctt
     3841 ccgcgacaag ggtacgggga tttgggttcg gacccgaccc gactccatcc ccaccgactc
     3901 aggcgactac gccgacatca aaacgagttt tgagattggc gagggcaccg agaaggcgat
     3961 gcgcaatttc cgatacgaca tgcaggccgc tcttctgcgc tgggcctgcc gcgaagtagg
     4021 cttgccgttc tcctcattcg cggatgtgtt cgtcgaatcg accccaccgt actgcgtgga
     4081 catcgtgacg atcgacaccc gcgatctgga cgaagccgag gccgactgcc gaattgcgct
     4141 caaggtattt gcgcattgcc tcaagagcgg agagtggtgg ggccctgtcg gcacgcagcg
     4201 cgacgcgcgc acagcgttct tctcggagca gttccgg
//
LOCUS       DATILV010000641         9141 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_661368, whole genome shotgun sequence.
ACCESSION   DATILV010000641 DATILV010000000
VERSION     DATILV010000641.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9141)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9141)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9141
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_661368"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1186)
                     /locus_tag="VLJ17_15155"
     CDS             complement(<1..1186)
                     /locus_tag="VLJ17_15155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24352.1"
                     /translation="MAGELESLAGLDGDIETGPLAEESPAAQAQSIDQIPPSKLPEAQ
                     QFQVLRNWWQADADFSREWRAQAKFWLGFRAGEQWTVDDKAVLDDKQRPHIVFNRVLT
                     ILKAVAGMEINGRHETAFLPRGTEDAKPNEVLSQASKWMGDECDAEDEQSQAFDDTAT
                     VGMGWAEQRISYEDDPSGLYVEDKISPLEMYWDRTARKKNLSDSRRRSRVRRMPLSDA
                     MHLFPGKTRAEVDAVWAVDGTLDYPEKSIEQKWKRDEDNSLDPSYNDLSEVTVVQMQW
                     VEKEIYWLVAVEGSNDKHEISGAQYQVFADRMKQLGWQFESVRLVRKVYKQAFLGAEG
                     CMLKKAKDSPIAGDFSWKCITGELDQVKGTWFGLVKPMVDPQMWANKWLSQVLHILNT
                     TAK"
     gene            complement(1189..1824)
                     /locus_tag="VLJ17_15160"
     CDS             complement(1189..1824)
                     /locus_tag="VLJ17_15160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24353.1"
                     /translation="MGHLIATMERIEAEIEADKTSAQVAAAAMKSGGEIDSAPVSAEP
                     IEVWRDGDPDVSDWVIYQPRRGTIRRGRNRVAALVVHRYPDARLLDLAIFYEASDTLD
                     DQRVPEAVGEERGWIRKGGPPRMVVGDDILGADDSRPGSIEWKRDGLDTLRQEVADLR
                     ALILGDYDTPPASILDMMNTLDERLDALAKAPKKKRGRPPKVKAENKAATE"
     gene            complement(1833..2249)
                     /locus_tag="VLJ17_15165"
     CDS             complement(1833..2249)
                     /locus_tag="VLJ17_15165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24354.1"
                     /translation="MKVLRLAVLFLALLASPVAAQFNGGNRGPDLSGYATTSALNTVV
                     QAANVTTASDGTWSVTWARAFATNTYAVSADPIGTTSSPLLCQITSKSTTVVAGKCWA
                     VLPSVVVSLAALPLTVNIAASPGAIPMSVIGRDATQ"
     gene            complement(2254..2634)
                     /locus_tag="VLJ17_15170"
     CDS             complement(2254..2634)
                     /locus_tag="VLJ17_15170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24355.1"
                     /translation="MMRLIALLCFLLAGPAAAQVGQQNVTPVDCSGTITVGGAAQNAH
                     AAFNTLRGAILKNIDTSEVLWFSITGTAAAGALGSYPLAPGAVTTFAGAESFTTPFGL
                     GYNTALSVVAATSTHKYSCTRWMN"
     gene            complement(2631..2885)
                     /locus_tag="VLJ17_15175"
     CDS             complement(2631..2885)
                     /locus_tag="VLJ17_15175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24356.1"
                     /translation="MGVSELRSAFNDIAEPAGFTCSKAELSYEPGDDIQWQRLTFRGT
                     DAAGVPFVVRSERLRPETSVIEVAKSVATQLIAGPKGTKP"
     gene            complement(2875..3045)
                     /locus_tag="VLJ17_15180"
     CDS             complement(2875..3045)
                     /locus_tag="VLJ17_15180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24357.1"
                     /translation="MERVMLVDLDRETIELIFSAGKIIWLIFGITGLIGVIGMLCCKD
                     NVQPHGREGDGR"
     gene            complement(3033..4589)
                     /locus_tag="VLJ17_15185"
     CDS             complement(3033..4589)
                     /locus_tag="VLJ17_15185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24358.1"
                     /translation="MSDVLISPEVAALAKTPEYQRLKSNYGDPEWRLDNIYYIRNAEG
                     ERVKFVRNEAQMAFYKAMALRNILPKSRKLGFSTLIAILICDRCVFRFGHVAGIIDIT
                     LDDAVDKLSIIKFAYENLNPGIKAANPLIRDNVEYLEWKNGSAVSVGTSYRGGSPADL
                     HCSEFGKISVDSPDVAREIQTGAITAVPLTGRVWIESTAHGTSGAFRDMVKIAEAKMM
                     AGTPLTVLDFKFHFFGWWIKKENRLPNNLVVVPDALKKYFGEVEAKIGRKLDADQRAW
                     YAKEYERLGPDDIREEGPSTADELFWVSQQGTFWREEIGQARRDRRIGLPVPYDRTRL
                     VHTAWDIGQNCTAIWFYQTDGVRYRFIDYWEEEGASLQRACRLLDEKKSERGFLYGKH
                     LGPHDIDNGEWGNEGKTRKAIAEELGVKFTVVPRIRVKEDSIEAARRMLAVSWFDSEY
                     ASHGVTRLENYRKRWNKLMGQFTSDPLEDGNDHGSDAYQQFAMGEKPEKVKQDTRHKK
                     DRPKRSAWSA"
     gene            complement(4595..5212)
                     /locus_tag="VLJ17_15190"
     CDS             complement(4595..5212)
                     /locus_tag="VLJ17_15190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24359.1"
                     /translation="MARDCEICGGARVIRLPVRRKLEVQGFSADDASAPIRALTGDHL
                     RMDYREYPCPECGTKANVERVFALDVHSTIDSRVPSEAMPHIRASVAHRLVEGLLQGG
                     YIEFEEGRPDLRTLHLSRPIFATLYAVHPGEARQTIESRIRERQDQVAKVAAEAAISQ
                     IENWGSASRYADGLIEKRHAAKFIREAVVATSNQWSKASQLQDAS"
     gene            complement(5222..5470)
                     /locus_tag="VLJ17_15195"
     CDS             complement(5222..5470)
                     /locus_tag="VLJ17_15195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24360.1"
                     /translation="MPVSRIAFALGDLRNEVMALLPEDIRETTVVTLCMDPIVYDRVV
                     SELQYRHHGAKLQVDADYHGPGKAIRYAGMRLVMVPLR"
     gene            complement(5472..5930)
                     /locus_tag="VLJ17_15200"
     CDS             complement(5472..5930)
                     /locus_tag="VLJ17_15200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24361.1"
                     /translation="MRLITSKDILGQMARWAVIQHPFYEPVGLFEICKLIDEAAQKQF
                     ENSVPGLPMRRFKDSHEIRGWLQATVGNHPTLIAWNTPRSGHTSNISVSRYDGPAPED
                     DFIDLDALLINVSREAWKDAEDFDDAKRVVQPLGTLDEKSAVPSAIHWLT"
     gene            complement(5927..6286)
                     /locus_tag="VLJ17_15205"
     CDS             complement(5927..6286)
                     /locus_tag="VLJ17_15205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24362.1"
                     /translation="MTVSVRIYGHTGLEQLVMPTPRQFTGDTVFVLVQPYVFQENLTA
                     GAVAVSSTSNSDSRVRLLRIEVQDGGAIRYEINPPNREGGVVVANVNSPILSGHDNFY
                     FRQGWSLSVIDASTVAS"
     gene            complement(6283..6408)
                     /locus_tag="VLJ17_15210"
     CDS             complement(6283..6408)
                     /locus_tag="VLJ17_15210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24363.1"
                     /translation="MTVLDTVGLDTARAQAIIADMLADGEIELRGDSYFPKRAEK"
     gene            complement(6489..7034)
                     /locus_tag="VLJ17_15215"
     CDS             complement(6489..7034)
                     /locus_tag="VLJ17_15215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24364.1"
                     /translation="MKLERKCHWQSCDSGARWQPHLHIECQGVGIGRALSLISTIECC
                     DEHRENVKPYVLSDANREAITTKLMDEGYPEPNFLTARIEFKPIEDRGPVAVETCNRE
                     GCTEFARWRIVQAIPHMTKIGDVERLRTNLVVCDKHKAEVVPADLLDPESKAATHRAL
                     KARGLALRSLKRMKLEFEAMR"
     gene            complement(7225..7383)
                     /locus_tag="VLJ17_15220"
     CDS             complement(7225..7383)
                     /locus_tag="VLJ17_15220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24365.1"
                     /translation="MYAAKEGNSTLGIPQSIGKEFIAASHGIKDLPKRVKDGKPVKRK
                     RDFGSLAP"
     gene            complement(7420..7563)
                     /locus_tag="VLJ17_15225"
     CDS             complement(7420..7563)
                     /locus_tag="VLJ17_15225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24366.1"
                     /translation="MIYFWHGNAGWYVGYLRDEGEGGEVLIGPTETYAEILTDAMRRK
                     LIG"
     gene            complement(7560..7814)
                     /locus_tag="VLJ17_15230"
     CDS             complement(7560..7814)
                     /locus_tag="VLJ17_15230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24367.1"
                     /translation="MTDGSIKIILEPTKQKVKLGLMEYRVFKGRTSTGIEIEMLGLFR
                     IHDPVKRAEFERAVCAIRIEDPPPITLVSDEGLIRTVGHR"
     gene            complement(7807..8001)
                     /locus_tag="VLJ17_15235"
     CDS             complement(7807..8001)
                     /locus_tag="VLJ17_15235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24368.1"
                     /translation="MMQDVTARKLSAREAGEKLARLMERQLDYAEGHIDNVALRLFVR
                     AYWDRISLLAHAIHEDHEHD"
     gene            complement(7998..8207)
                     /locus_tag="VLJ17_15240"
     CDS             complement(7998..8207)
                     /locus_tag="VLJ17_15240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24369.1"
                     /translation="MVETIARVRRDMPRNAHVMAICDDWEKQREEIRRLQPKPRVDRK
                     TYMREFMRAKRKRDRERRQAEKRGA"
     gene            complement(8210..8839)
                     /locus_tag="VLJ17_15245"
     CDS             complement(8210..8839)
                     /locus_tag="VLJ17_15245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24370.1"
                     /translation="MRVAALFVAKGGCYIGLDGVDLWDEARDARLYAGPHPIVAHPPC
                     QRWGKLWAGQPLYIKRTGRRKIKGDDEGCFAAALAAARKWGGVIEHPWGSHAWPHHGL
                     NKPPREGGWIAADFEGGWTCCVEQGRYGHYARKPTLLLAYRVELPELAWGKSKAKLDP
                     ATVERVGLVRAKRRGEVGGRGGGQNSAPRIGTPLPFRDLLISIARTVGQ"
     gene            complement(8836..9051)
                     /locus_tag="VLJ17_15250"
     CDS             complement(8836..9051)
                     /locus_tag="VLJ17_15250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24371.1"
                     /translation="MSKPTTWQRVEATNDPSGDTWLNREDFNNIRKAKTYFNTLRDGK
                     HYARVSIDMWDKEGEHVGTDVWFRGKQ"
BASE COUNT         1803 a         2902 c         2452 g         1984 t
ORIGIN      
        1 ccttggccgt cgtgttgagg atatgcagga cttgggacag ccacttgttc gcccacatct
       61 gcggatcgac catgggcttc accagcccga accatgtccc cttgacctga tcaagttcgc
      121 ccgtgatgca cttccatgag aaatccccgg cgataggcga gtccttggcc ttcttaagca
      181 tgcagccctc agcgccgagg aatgcctgct tgtagacctt gcgcaccagc cgcacggact
      241 cgaattgcca gccgagttgc ttcatccgat cggcaaatac ctgatactgc gcgccgctga
      301 tttcgtgctt gtcgttgctg ccctcgaccg cgaccagcca atagatttct ttctcgaccc
      361 actgcatttg aacgacggtg acctcagaca gatcgttgta tgagggatcg agcgagttat
      421 cttcgtcgcg cttccatttc tgttcgatgg atttctcggg ataatcgagc gtcccatcca
      481 cagcccacac cgcatcaacc tcagcgcgcg tcttcccggg aaatagatgc atcgcgtccg
      541 acagcggcat gcggcgaacc cgggatcgtc gccgcgaatc gctcaggttc tttttccgag
      601 ccgttcgatc ccaatacatt tcgagcgggc tgatcttgtc ctcaacataa aggccagatg
      661 gatcatcctc ataggaaatc cgctgttcgg cccagcccat accaacggta gccgtatcat
      721 cgaacgcctg agattgctcg tcctcagcgt cacactcatc gcccatccat ttcgaggctt
      781 gcgacagaac ttcgtttggc ttggcgtcct cagttccccg aggcaggaat gccgtttcat
      841 ggcggccgtt gatttccatg cccgccacgg ccttgaggat cgtcaacacg cggttgaaca
      901 cgatatgcgg gcgctgcttg tcgtccagca ccgccttgtc gtctacggtc cattgctcgc
      961 cggcacggaa gccgagccag aactttgctt gagcgcgcca ttcgcgggag aaatcggcat
     1021 cggcctgcca ccagttccgc aatacctgga attgctgcgc ttccggtagc ttgctcggag
     1081 gaatttgatc gatgctttgc gcttgcgcag ccggagactc ttccgcaagc ggccctgtct
     1141 caatgtcccc atcgagcccg gcaagagatt ccagttcacc agccatagtt attccgttgc
     1201 ggccttgttt tcagccttga ccttcggcgg cctgccacgt ttctttttgg gcgccttggc
     1261 aagtgcgtca agccgctcgt ccagcgtgtt catcatgtcg aggattgagg ccggaggcgt
     1321 gtcgtaatcg ccgagaataa gagcgcgcag gtctgcgacc tcttggcgga gggtatcaag
     1381 gccgtctctc ttccactcaa tggagccggg gcgggaatcg tcagcaccta aaatgtcgtc
     1441 gccgaccacc attcggggcg ggccgccctt gcgaatccat ccgcgctctt ccccgacagc
     1501 ttcagggacg cgttgatcgt ccagcgtatc actggcctca tagaagatgg ctagatcgag
     1561 cagccgcgcg tcgggatacc gatgcaccac gagcgcggcg acacgattac gcccgcgccg
     1621 gatcgttcca cgccgcggct ggtagatcac ccaatccgat acgtcggggt cgccgtcgcg
     1681 ccaaacctca atgggctcag ccgagacagg cgcggaatca atctccccac cagacttcat
     1741 ggccgcagcc gcaacttgcg ctgacgtttt gtccgcctcg atctcggctt ctatgcgttc
     1801 cattgtggcg atcaggtggc ccataagaac tcctattgcg ttgcgtcgcg gccgatcacc
     1861 gacatgggga ttgcacccgg actagcggcg atattaaccg tgaggggcag cgcggcgagc
     1921 gaaactacca cggacggcag gacagcccag cacttgcccg cgacaaccgt cgtgctcttg
     1981 gacgtgatct gacacagcag cggtgagctt gtcgtgccga tcgggtcagc actcacggcg
     2041 taagtattgg tcgcgaaggc cctagcccat gtcacggacc acgtaccatc tgaggcggtc
     2101 gtgacgttgg cggcttggac aaccgtattg agggcgctcg tggtcgcata gcccgacagg
     2161 tcgggtccgc gattgccgcc gttgaattgc gcagcaaccg gagacgcaag cagcgcaaga
     2221 aatagaacgg caagccgaag caccttcatg acgttagttc atccaccgtg tgcagctata
     2281 tttatgggtt gatgtcgccg ccacgaccga gagcgcggtg ttgtagccga gcccaaatgg
     2341 cgttgtgaac gactcagcgc ccgcgaacgt cgtcaccgcg ccgggcgcga gaggatagga
     2401 gccgagcgcg ccagcggcgg ccgtgcccgt aatcgagaac cataagactt cgctggtatc
     2461 gatgttcttg aggatcgccc cgcgtagcgt gttgaaggct gcatgggcgt tctgtgccgc
     2521 cccgcctacc gtgatcgtgc cggagcaatc gactggcgtg acgttctgtt gcccgacctg
     2581 ggcggcggct ggacccgcca gcaggaaaca cagcagcgca atcagtctca tcatggcttc
     2641 gtccccttag gaccggcaat cagttgcgtg gcaacgctct tggcgacctc aattacgctg
     2701 gtttccggcc gcaaacgctc agaacggacc acgaaaggca ctccggccgc atccgtacca
     2761 cggaacgtaa gccgttgcca ctgtatgtcg tcgccgggct cgtaactcag ttcggccttg
     2821 gaacatgtga acccagcagg ctcggcaatg tcgttgaagg cggatcgaag ttcgctaacg
     2881 cccatcgcct tcccgtccat gcggctgaac attatcctta cagcaaagca ttccaatcac
     2941 tccgattaag ccggttatgc cgaagatcag ccagatgatt ttccctgctg agaaaataag
     3001 ctcaatggtt tccctgtcta agtctaccag catcacgcgc tccatgccga ccgcttcggc
     3061 cggtctttct tgtgccgcgt atcctgcttc accttctcag gcttctcgcc catggcaaat
     3121 tgctggtacg catcgcttcc gtgatcgttg ccatcctcaa gaggatcgct cgtgaattgc
     3181 cccatcagct tattccaccg cttgcggtag ttttcaagcc gcgtgacgcc gtgcgaggca
     3241 tattcgctgt cgaaccatga caccgccagc atccgccgcg cggcttcaat cgaatcctct
     3301 ttcacccgaa tgcggggcac tacagtaaat ttgacgccaa gctcctccgc tatggccttg
     3361 cgcgtcttgc cctcgttgcc ccactcgccg ttgtcgatgt catgcggccc gagatgcttg
     3421 ccgtacagaa aaccgcgctc agattttttc tcatccagca accggcacgc ccgctgcagg
     3481 ctcgcgcctt cctcttccca atagtcgata aaccgatagc gcacgccgtc agtctgatag
     3541 aaccagatcg ccgtgcagtt ctgcccaatg tcccatgccg tatggacgag ccgcgtccgg
     3601 tcatacggca ccggcaatcc gatacgccgg tctcgccgcg cctgcccgat ttcctctcgc
     3661 cagaatgtgc cttgctgact gacccaaaaa agctcatctg ccgttgaagg cccttcctcg
     3721 cgaatatcgt caggcccaag ccgttcgtat tcttttgcgt accaggcgcg ttgatcggca
     3781 tcgagcttgc gcccgatctt ggcctcgacc tcaccaaagt attttttcag tgcgtcggga
     3841 accaccacca agttattagg caggcggttc tctttcttga tccaccaacc gaagaaatga
     3901 aacttgaagt ccagcactgt gagcggcgtg ccagccatca tcttcgcttc cgcaatcttc
     3961 accatgtcgc ggaatgcgcc cgatgttcca tgcgccgtgc tttcaatcca gacgcggcct
     4021 gtcaacggca ccgcggtaat agctccggtt tgaatttccc gcgccacgtc cggactatcg
     4081 acgctgattt tcccgaattc cgagcagtga agatcggccg gcgagccacc tctgtaggac
     4141 gtgccaacgg aaacggccga gccgtttttc cattcgaggt attctacgtt gtcccgaatg
     4201 agaggattcg ccgccttgat tcccggattc aggttctcat acgcgaactt gatgatcgac
     4261 agtttgtcca cagcatcgtc aagcgtgata tcgatgatgc cggcgacatg cccgaaccgg
     4321 aacacacagc gatcacagat caggattgca atgagcgtag agaaaccgag cttccgagac
     4381 ttcggcaata tgttccgcag cgccatggcc ttgtagaagg ccatttgggc ttcattgcgg
     4441 acgaacttga cccgttcacc ctccgcgttg cggatgtagt aaatgttgtc tagccgccat
     4501 tccgggtcgc cgtagttgct cttgaggcgc tggtattctg gcgtcttggc aagagcggcg
     4561 acttcaggag agatcagaac gtcggacatg cagactacga cgcgtcttgc aactgcgatg
     4621 ccttggacca ttgattgctg gtagcgacca ccgcctctcg gatgaatttc gccgcgtgcc
     4681 tcttctcgat taggccgtcc gcatagcgcg acgccgagcc ccaattctca atctgagaaa
     4741 tagcagcttc ggccgccacc tttgcaacct gatcctgccg ctcgcgaatg cgggactcaa
     4801 tggtctgccg cgcttctccc ggatggaccg catagagcgt ggcgaagatt ggtcgactca
     4861 aatgcagggt gcgaaggtca ggcctgcctt cctcaaattc gatatagccg ccctgcaaca
     4921 gcccctcaac aagacggtgc gccacgctcg cccggatatg cggcatggcc tctgacggca
     4981 cgcggctatc aatcgtgctg tgaacatcta atgcgaacac gcgctcaaca ttcgctttag
     5041 tgccacactc agggcatgga tactcccgat agtccatgcg taaatgatcg cccgttagcg
     5101 ctcggattgg agccgacgca tcatccgccg agaagccctg cacctctaac ttgcgccgca
     5161 ccggcaatcg aatgacccgg gcgccgccgc aaatctcaca atcccgtgcc atgtttagct
     5221 cctacctcag cggcaccatc accagccgca tgcccgcata acgtatcgcc ttgcccggcc
     5281 cgtgatagtc cgcatcaacc tgcagcttcg cgccgtgatg ccggtactgc aattcactca
     5341 ccacgcgatc atacacgata gggtccatgc agagcgtgac caccgtagtc tcgcgtatgt
     5401 cctccggtag cagcgccatg acctcattac gaagatcgcc gagagcgaag gctatgcgcg
     5461 agacgggcac cctaagtaag ccagtgaatg gcactgggaa ccgctgactt ttcgtctaga
     5521 gtgcctagag gttggacaac gcgtttggca tcgtcaaaat cctcagcgtc tttccatgct
     5581 tcgcgcgaga cattgataag aagcgcgtca agatcaatga agtcgtcttc cggtgccggt
     5641 ccatcatatc gcgaaacact gatgttgctt gtatgacctg agcgcggcgt gttccacgca
     5701 atcagcgtag gatgattgcc caccgtggct tggagccatc cgcgaatctc gtgactgtcc
     5761 ttgaacctcc gcattggaag gccaggaaca ctattctcga attgcttctg cgctgcctcg
     5821 tcaatcagct tacagatttc aaataagccc acaggttcgt agaatggatg ctggataaca
     5881 gcccaacgcg ccatctgccc gagaatgtct ttggaggtaa ttagcctcat gacgccaccg
     5941 tgctcgcgtc gatgaccgat agagaccagc cttgacgaaa atagaagtta tcatgcccgc
     6001 tcagtatcgg cgagttgacg ttcgccacca cgactccgcc ctctcggttc ggtggattga
     6061 tttcgtatcg gatcgcgccg ccgtcttgga cctcaatccg cagcaggcgc acgcgcgaat
     6121 cagaattgga cgtgctggat acagccaccg cgcccgccgt gaggttttcc tgaaacacgt
     6181 atggctggac cagcacgaac accgtgtccc ccgtgaactg ccgcggcgtc ggcatcacga
     6241 gttgttcaag gccggtatgc ccgtaaatcc ggacggatac tgtcatttct ctgccctctt
     6301 cgggaagtag gagtcgccgc gcaactcaat ctccccatct gccagcatgt ccgcaatgat
     6361 cgcctgagcc cgtgccgtat caagccccac ggtgtccagc acagtcatgg ttggaattcc
     6421 ccatggccta cgttggaaga accctatcaa attctcccgg ttaacctcaa ataccccatc
     6481 aggtcgaatc atcgcattgc ctcaaactca agcttcatcc gtttcaggct ccgcagcgcc
     6541 agcccgcgag ctttcagcgc tcggtgtgtc gccgccttgc tctccgggtc cagcagatcg
     6601 gccggaacaa cttcggcctt gtgcttatca cagaccacga ggtttgtccg caagcgctct
     6661 acgtcgccga tcttcgtcat atgcgggatg gcctggacga tgcgccagcg ggcgaattcg
     6721 gtgcagccct cacggttaca ggtctcgact gccaccgggc cgcggtcctc gatcggcttg
     6781 aactcgatcc gggccgtgag gaaattgggc tcgggatagc cctcatccat gagtttcgtg
     6841 gtaatcgcct cccggttcgc atcggatagt acgtaaggct tcacattctc ccgatgttca
     6901 tcgcagcact cgattgtgga aatgagagag agcgcgcggc cgatgccgac gccctgacac
     6961 tcgatatgca agtgaggctg ccagcgggcg ccggaatcgc atgattgcca gtggcatttt
     7021 cgctctaatt tcatcgcctg atcggcccat cgttctctga gacagcgacg gcgatccatg
     7081 tgaatgggcc accgacacag gccgggaaga tcatcagcgc cgcaactacg ccatcaccaa
     7141 acccatcgac catatcgttt cggcacatga tccagagcca tgctgcgata ccggatagag
     7201 accatagcac tgcgacattt tccattacgg cgccaagctc ccaaaatccc gcttccgctt
     7261 caccggcttg ccgtctttca cgcgcttggg caaatccttg atgccatggc ttgccgcgat
     7321 gaattccttg ccgatactct gcgggatgcc gagagttgag ttgccttctt tggccgcgta
     7381 catggctttg cgctgttgct gtgagacaac cggcatacat cacccaatca gtttgcggcg
     7441 catcgcgtca gttagaatct cggcatatgt ctcagtcggg ccgatgagaa cttcgccgcc
     7501 ctcaccttca tcgcgaagat agccgacata ccaaccggcg ttgccgtgcc agaagtagat
     7561 catcggtgcc ccactgtcct gataagcccc tcatccgaga ctagcgtaat cggcggcggg
     7621 tcctcaatcc tgatggcaca caccgcgcgc tcgaattccg cacgcttgac cggatcgtga
     7681 atgcggaaca gccccagcat ctcaatctct atgccggtgg aggtccggcc cttgaatacg
     7741 cggtattcca tgaggccgag cttcaccttc tgcttggtgg gctccaggat gattttgatt
     7801 gagccgtcag tcatgctcgt gatcttcgtg aatagcatga gccaaaagcg atatccgatc
     7861 ccaataggca cgaacgaaca agcgaagagc tacgttgtcg atatggcctt cggcataatc
     7921 tagctgccgc tccataagcc gcgccaattt ctcaccagct tcccgcgcag ataattttcg
     7981 tgccgtcaca tcctgcatca tgctccccgc ttctctgctt gtcgccgctc tctatcgcgc
     8041 ttgcgtttag cacgcatgaa ctcccgcatg taggtcttgc ggtcaaccct tggcttgggc
     8101 tgcagccgcc gaatctcctc gcgctgcttt tcccaatcgt cgcagattgc cattacgtga
     8161 gcgttgcgtg gcatgtcgcg acggacgcgg gctatggttt ctaccatact cattgtccca
     8221 ccgttcgcgc gattgagata agaagatcgc ggaatgggag cggcgtgccg atccgaggcg
     8281 cgctgttctg gcctccgcca cgaccgccga cctcaccccg tcgcttcgcg cgaacgagcc
     8341 ccacgcgctc cacggtggcc gggtccagct tggctttgct cttgccccac gccaactcag
     8401 gcaattcgac gcggtacgcg agcaacagtg tcggcttgcg ggcgtagtgg ccataacgcc
     8461 cctgctcaac gcagcacgtc cagccgcctt caaaatctgc tgctatccag ccaccctcgc
     8521 gtggcggctt gttgagccca tgatgcggcc aagcgtggct gccccacgga tgctcgatca
     8581 caccgcccca tttgcgggcc gcggccaacg ccgccgcgaa gcatccttca tcgtcgccct
     8641 tgatcttccg ccggccggtg cgcttgatgt agagtggctg gccggcccag agcttgcccc
     8701 agcgctggca gggcgggtgc gcgacgatcg ggtgcgggcc agcgtacaga cgcgcgtctc
     8761 gcgcttcgtc ccataggtca accccgtcga gcccgatgta gcaaccaccc ttggcgacaa
     8821 acaaagccgc cactctcatt gcttgccccg gaaccataca tcagtgccga cgtgctcgcc
     8881 ttccttgtcc cacatgtcga ttgaaacgcg cgcgtagtgc ttgccgtcgc gcagcgtgtt
     8941 gaagtaggtt ttggccttgc ggatattgtt gaaatcctct cggttaagcc aagtatcgcc
     9001 agacgggtcg tttgtggctt caacacgctg ccatgtggtg ggcttgctca tcgcgcggcc
     9061 acttcatgcg ccatgccgag cgacgggcac acaatcggat cgccaccaac agtcacgccg
     9121 tagacgtaaa aatcgaggcc g
//
LOCUS       DATILV010000642         1731 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_924660, whole genome shotgun sequence.
ACCESSION   DATILV010000642 DATILV010000000
VERSION     DATILV010000642.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1731)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1731)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1731
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_924660"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(14..817)
                     /locus_tag="VLJ17_15255"
     CDS             complement(14..817)
                     /locus_tag="VLJ17_15255"
                     /inference="COORDINATES: protein motif:HMM:NF025091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HSV24372.1"
                     /translation="MTGQIRSGRHDVAADAEKLRKLHVPGDPLVLANAWDPTSARVVE
                     SAGMHAIATASNALAPVNGYEDHGHLPPDVAFGALRRVADAVMLPVTADLEDGYGLSS
                     EEFVDRLADAGACGANLEDTDHRVGTLVDADRHAERIASIKAAARARGFDAVINARVD
                     VHVHKGTLQDGLERARRYFDAGADCVYPIFLWDVSAIREYVALGPTNILYGPDRIALG
                     ELARLGVARISVGPLLFRLLLRRLKIATEALRRFDDKGFGPDWQGDLWN"
     gene            complement(814..1407)
                     /locus_tag="VLJ17_15260"
     CDS             complement(814..1407)
                     /locus_tag="VLJ17_15260"
                     /inference="COORDINATES: protein motif:HMM:NF024852.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSV24373.1"
                     /translation="MRIFLAGATGLIGTRLLPLMLAEGHVIAGMTRTPAKTDGLRAAG
                     VNPVLCDVFDQRSLIAAVKDFRPDVIVHQLTDLPDDIEKIADFFAANDRIRSEGTRNL
                     LAAAQAANASGFLAQSIAWRSGPCTGPVLEAHENGVISAGGAVLRYGQFYGPGTFYEN
                     DPPPAPRIHIDAAARRTMPFLAGPRGIFTITDEEVAS"
     gene            complement(1462..>1731)
                     /locus_tag="VLJ17_15265"
     CDS             complement(1462..>1731)
                     /locus_tag="VLJ17_15265"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV24374.1"
                     /translation="SSAAALEAFRADPERFDALITDERMPEMSGSALIREVRSTRSSM
                     PVVLMTGYLEATAGEASLAIGVDEVLKKPLLARDLATSLAKVLRL"
BASE COUNT          351 a          554 c          507 g          319 t
ORIGIN      
        1 atcatgaaca acctcagttc cacagatcgc cttgccaatc aggtccaaag cccttatcgt
       61 cgaaacggcg gagcgcctcc gtagcgatct taagtcgcct tagcaagagc cggaacagca
      121 gagggcccac gctaatccgc gcgacaccca gcctcgcgag ctcaccaagc gcgattctgt
      181 ccggaccata caggatattc gtcgggccga gggcgacgta ctcccgtatg gccgacacgt
      241 cccacaagaa gatcgggtag acgcaatcgg caccagcatc gaagtacctc cgggcacgct
      301 ccaagccatc ctgaagagtg cctttgtgaa cgtggacatc gacccgagca ttgattacag
      361 cgtcgaagcc gcgggctcgc gcagctgctt tgatagaggc aatacgctcc gcgtgcctgt
      421 cggcgtcaac aagagtgcca acacgatggt cagtgtcttc taggttggcc ccacaggcac
      481 ccgcatcggc gaggcgatcg acgaattcct ccgatgacag tccatagcca tcctccaggt
      541 ctgccgtgac cggcagcatc acagcgtcag cgacgcgtcg aagcgcgcca aacgcgacat
      601 ccggtggaag gtggccgtga tcctcataac cgttcacagg cgcgagcgcg ttgcttgctg
      661 tggcaatcgc gtgcatgcca gcggattcaa caactcgcgc gctcgtcgga tcccaggcgt
      721 tggccaagac taggggatcg cccggcacat gcagcttgcg cagcttctca gcgtccgcgg
      781 caacgtcgtg cctacccgat cttatttgcc cggtcacgac gcaacctcct catcggtgat
      841 ggtgaagatc ccacgcggcc ccgcgaggaa cggcatggtg cgccgtgcgg cggcgtcgat
      901 gtggatgcgc ggagccggcg gcggatcgtt ctcataaaat gtgccgggtc cgtagaattg
      961 cccatagcgc agtacggccc cgcccgcgga gatcacccca ttctcgtgcg cttcgagcac
     1021 aggcccagtg cagggcccgc tgcgccaagc tatgctctgg gcaaggaaac ctgaagcgtt
     1081 tgctgcctgc gctgctgcca ggagattccg cgttccctcg cttcgtatgc gatcgttcgc
     1141 cgcaaagaaa tcggcgatct tctcgatgtc gtccggcaga tcagtcagct gatgaacgat
     1201 gacatccggt cgaaagtctt tgaccgctgc gataagagac ctctggtcga agacgtcgca
     1261 caatactgga ttaacccccg ctgcgcgcag tccgtcggtc ttggccggcg tccgagtcat
     1321 gcctgcgatg acatgtcctt cggccaacat gaggggtagt agccgagtgc cgatgaggcc
     1381 cgtggcaccc gccagaaaga ttctcatatt ggttctactc catagaagat gctcaccgca
     1441 aagtcccaat ggttgccaag gctagaggcg taacaccttg gccaggctcg tggcgaggtc
     1501 gcgcgccaag agcggcttct tcaagacttc gtcgaccccg atcgccaagg aggcttcccc
     1561 tgccgttgct tccagatatc cggtcatcaa cacgacgggc atggaactgc gcgtgctgcg
     1621 cacttcgcgg atcagcgctg agcccgacat ttccggcatg cgctcgtccg tgatgagggc
     1681 atcgaagcgt tcagggtccg cacggaacgc ctcgagcgca gccgcgctcg a
//
LOCUS       DATILV010000643         2098 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2456275, whole genome shotgun sequence.
ACCESSION   DATILV010000643 DATILV010000000
VERSION     DATILV010000643.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2098
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2456275"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..184
                     /locus_tag="VLJ17_15270"
     CDS             <1..184
                     /locus_tag="VLJ17_15270"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HSV24375.1"
                     /translation="VAIARSAGAKSVADGVETHSDFLAVRELGFDLLQGQMFAKPMTP
                     RKFERTMLARNYAAVA"
     gene            complement(192..1076)
                     /locus_tag="VLJ17_15275"
     CDS             complement(192..1076)
                     /locus_tag="VLJ17_15275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018645527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2189 domain-containing protein"
                     /protein_id="HSV24376.1"
                     /translation="MAYSNILVGAGSRPAQPAIRKIGVADLQDALAKGADDFYAMPTH
                     AMFLCIIYPIVGFALARLAFGYSILPLLYPLASGFALVGPIAALGLYELSRRREAGLD
                     TSASRAFNVFESSSIGAIAALGILLLIIFAIWVAVANAIYIANFGYASPSSVEAFVED
                     VFTTRAGWNLILVGNLVGLLFAILVLSISVVSFPLLLDRDVGAAVAVLTSVRAVAHNP
                     VTMMVWGLIVAALLVVGSLPLFFGLTVVMPLLGHATWHLYRKVVEPEGSLRPTLPEER
                     KERRSAADFPTVLFPWAK"
     gene            complement(1728..2033)
                     /locus_tag="VLJ17_15280"
     CDS             complement(1728..2033)
                     /locus_tag="VLJ17_15280"
                     /inference="COORDINATES: protein motif:HMM:NF025160.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HXXEE domain-containing protein"
                     /protein_id="HSV24377.1"
                     /translation="MRRILPRSAPVLALSFPALMLINGIFFHVVPVIVTRGRFSPGLF
                     TAIVLLLPIGLTCYRVASDAGKLDLVSLVSSLLIGAGLMATPIVLLRIKDRPYFRQA"
BASE COUNT          508 a          591 c          636 g          363 t
ORIGIN      
        1 cgtcgctatc gcgcgcagtg ccggcgccaa atcggtcgcc gacggcgtgg aaacccactc
       61 ggacttcctc gctgtccgcg aactcggctt tgacctgctc cagggtcaga tgtttgccaa
      121 gccgatgacg ccgcgcaagt tcgagcgcac gatgctcgcc cggaattacg cggcggtcgc
      181 ctagcgaagc gctatttggc ccacggaaag aggaccgtcg gaaagtcggc tgcagagcgc
      241 cgctctttcc gttcttcggg aagcgttggc cgcaggctgc cttcgggctc cacgactttg
      301 cggtagaggt gccaggtggc atggccgagc agcggcatca cgacggtgag gccaaaaaag
      361 agcggcagtg atccgacaac cagaagcgcc gccacgatca ggccccagac catcatggtc
      421 acgggattgt gggcaacggc gcgaaccgag gtcagcacgg caacggccgc cccgacatcg
      481 cgatcgagca gcagcgggaa cgaaaccacg ctgatcgaca gcaccaggat ggcgaagagc
      541 aggccaacga ggttgccgac gaggatgagg ttccatccgg cccgcgtcgt gaacacgtct
      601 tcgacaaatg cctcaaccga ggacggcgag gcataaccga aattcgcaat gtagattgcg
      661 ttcgcaaccg caacccagat cgcgaaaata atcagcagca gaatacccag cgccgcgatg
      721 gcgccgatcg aggacgattc aaaaacgttg aaggcacgtg aggccgatgt atcgagcccg
      781 gcttcccggc ggcggctcag ttcataaagg ccgagcgcgg caatcggacc gaccagggca
      841 aagccgctgg ccaagggata aagcaacggc aggatcgaat agccgaaagc gagccgtgcc
      901 aaagcaaagc cgacaatcgg ataaatgatg caaaggaaca tggcgtgggt tggcattgcg
      961 tagaaatcgt cggcgccctt cgccagggca tcctgcaagt cggccacgcc gatttttcgg
     1021 atcgcgggtt gagctggacg gctaccggcg ccgaccagga tgtttgagta ggccatgtgt
     1081 tcacctcccg agacttcgac tcggatggcg tggcgcacgg actcagagcg ctcctttacg
     1141 ggctcttgat cgcgtcacgt catgagccat gggagcaatg ctagcacggc gtgccgaagc
     1201 cgacggatca caaatccgcg cgcacggtat caatgaacag gaactggaaa atcatgctgc
     1261 atggatgcaa cgttaacgtt gcacccatgc aacattgcat cagttcagca gaaacctctg
     1321 gatctagtgt ccgtcactgc cggttgcgtg cttggttctg acgtgtccgc tatggttcgt
     1381 cggcccattt tcatggtccg gcgacggagt gacagtgttc gacccggtat tgggcattcc
     1441 accggtttgc gcatttgaat ttacgccaaa gttaggcgcg gcggggcctt gtatgttttg
     1501 tgccaaatcg gtcgcagagg cgagcgccaa tccgatgacg agtgcactgg ttgtgacgat
     1561 cactcttggc atagggatct ccttgggtag atattttagg ccgctcccaa aaacaaactt
     1621 gcatacggag tccgatttcg aaaaggcggt ttaaggcgca cttggtatgc gacagatgca
     1681 tgctttcgaa aaattgctcg ggagagaggc gtcgacttcg atggacgcta tgcctgacga
     1741 aaatacggac ggtccttgat ccggagcaga acgatgggtg tcgccatcaa ccctgcgccg
     1801 atcaaaagag acgagacgag cgagactaaa tcaagtttgc ccgcatcgct ggcgacgcga
     1861 tagcaagtca acccgatcgg caggagcaac acgatcgccg taaacaagcc aggcgaaaag
     1921 cgaccgcgcg tgacgatcac cggcacgaca tgaaaaaaaa tgccattgat cagcatcagc
     1981 gcggggaagg acagcgccaa tacaggcgcc gacctcggca agattcgccg caactatgcc
     2041 aagcacaatc acgaggaaat taacgacgta gaaatgtgcc cattcaacgg gcagccgg
//
LOCUS       DATILV010000644         7933 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4241475, whole genome shotgun sequence.
ACCESSION   DATILV010000644 DATILV010000000
VERSION     DATILV010000644.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7933)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7933)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7933
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4241475"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(82..1074)
                     /locus_tag="VLJ17_15285"
     CDS             complement(82..1074)
                     /locus_tag="VLJ17_15285"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HSV24378.1"
                     /translation="MKRTLRAGFAVVAGAALSPRIGAVLMAGVLLSGCSVSVVLSTLT
                     AGSGARLLCVLIETTAFAVATVIFFAATRHREALVRSRFEQHLAPAVVRRIFERPRLL
                     KLCGERREVTALFTDIDGFTAMTHHADPEALVAALDHYFEGMATIIVAHGGMIDKIVG
                     DAVHALFNAPSDLDDHPRKAIECAVALHSWSEIFRHRREAAMVGFGRTRIGLETGPAI
                     VGDVGIRAKLDYTAHGDAVNVAARLEAANKELGSSICIGPVAASRCDQSLLRPLGKIF
                     VRGRDDAMTVFEPWSAKVPTRRHGEHYAFRVYDKDLIGAADCFDRYRPTSPCRL"
     gene            complement(1526..3832)
                     /locus_tag="VLJ17_15290"
     CDS             complement(1526..3832)
                     /locus_tag="VLJ17_15290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV24379.1"
                     /translation="MTLRDATTPAASRPVDAPPPRRRLFRKYVGLFVAVMCAALVANG
                     VLDIWFSFREQNILLMRSQQEQAKAAAAKIAYFVKEIEGQLAWATQLPWSPDTLDEWR
                     FDAVRLLRQVPAVTEVAQLDATGRELVRVSRLAADVVGSQTDYSQDDFFVKAVANKIY
                     YGPIHFLRESEPYMTIAMAGVRRDYGVIVAQVNLKFIWDVVSQIQVGVRGRAYVVDPA
                     GRLIAHPDISMVLRNTDVSHLAQVEAARQEGASAPSELPPVTDDIEGRPVLSVHAPIA
                     PLGWLVFVELPVDEAYAPLYGSIRRSAALLVAALALAAFAGLYLARRMTIPIRALHDG
                     AARIGRGDLDQRISIKSGDELQALGEQFNRMAAQLQDSYASLERKVEERTHQLELANF
                     AKSRFLAVASHDLRQPLHALGLFVAQLRSTTTAAERNRIVERIESAIAMINELFKALL
                     DISKLDAGALTPSVTEFPVARLFERVQTTFAGVAKEVGLDFRVVPTQAWVRSDFVLLE
                     QILLNLVSNAVRYVARGGILIGCRRRGQDLRIEICDTGPGIPDDQRQKIFGEFYRLDD
                     PQRDRRGLGGGLGLGLAIVDRLCRLLQHPIELSSRVGSGSRFSVVVPVVPASTKSAEP
                     PAPALSGLNLAAGKLIVEIDDDALALDGMGGLLRSWGCRVVAARSAAEALIALADAGP
                     PDLVISDFHLTDQRTGIDAIEQLRTAFGSPIPAFLVSGDISPALLQEAQRSGYHLLHK
                     PVDPMPLRTMLNRLLKKTGLAAAGRSIV"
     gene            complement(3829..4815)
                     /locus_tag="VLJ17_15295"
     CDS             complement(3829..4815)
                     /locus_tag="VLJ17_15295"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV24380.1"
                     /translation="MGRRRVLALLAGAVALWPPIALGQSVGRLRNIGVLMGLAETDPE
                     VLRRVAIFRQALQDLGWTEGHNIRIHYRSAIEADGLRALGNELLALQPDVIVAANSIV
                     ASTLLRETRTIPIVFVTASDPIGDGFVANLAQPNRNATGFTGNLASFCGKWLELLQEI
                     APGTTHFTALFNPNSAPAGGTYFLPSLQTAAASMSLGLDVALLREPTDIESVLAARAP
                     VGGIIVLPDQFTCAHRESIVEAAARYRVPAIYPFRSFADAGGLISYGIDVPDLYRRVP
                     SYVHRILNGARPADLPVLSPAKIELVINRRAAGMLGLTVPRIMLARADEVIE"
     gene            complement(5159..6052)
                     /locus_tag="VLJ17_15300"
     CDS             complement(5159..6052)
                     /locus_tag="VLJ17_15300"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV24381.1"
                     /translation="MLVSLAEGDPQGEAELSTFRQALLDRGWREGHNLRMDVRWSAGD
                     AERNRQFAAELVALAPDIILARSGQVVGALQKASHNKVPIVFTMTLDPVALGFVESLS
                     RPGGNTTGFLQMEYSFSGKWLEVLKQIAPQVTRVAVLRDATVPSGEAQLVAIHSAAPR
                     FGVELSPVDVRERDKMEPTLTAFAREGNGGLIVTASTIALSHRDLIIALAARQRFPAV
                     YPNPIYVNDGGLISYGPVALDQFRRAADYVDRILKGAKPGDLPVQAPVRFEMALNLKT
                     AKAIGLDVPRIVLQRATQVID"
     gene            complement(6153..7136)
                     /locus_tag="VLJ17_15305"
     CDS             complement(6153..7136)
                     /locus_tag="VLJ17_15305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24382.1"
                     /translation="MADIGVFMNLPSADPEALRRKLILEGGLPKFTFDYRYGGGDYDS
                     YGSIAIDLVKSNPDARIFFASCWPTMQALNDAMQSLAIAPLKGVVYSGMTDSTIQSYG
                     ANDTGIEAFELADLCPNWPSLLMQIAPDVKRAAVIYDFDRNCSRPCMGDQNRMITDSA
                     IELGLSVDQPIDAGLDPMALKCAIDGFACADTSPAGLIVTSGTLTAGSRLDITRIATS
                     NNLPVIYPSTLFTDSRNHPEAAGLISYGPDVLGLYRRTASEFLSAILSQLLTTADIRN
                     RFQPVPNKDFDLIVNQSAVQNLAANGVQLNVTDTMTVTLNGAMTKVPIIKV"
BASE COUNT         1661 a         2310 c         2417 g         1545 t
ORIGIN      
        1 aaagcattgg acgtgtccaa ccgcaccgaa gcagtcatcg cggtcagtga actggggtgg
       61 aaattgccac cgatccccaa gtcacaggcg gcacggtgat gtgggcctgt agcgatcgaa
      121 gcagtcggcc gcgccgataa gatctttatc atacacgcga aaagcgtaat gctctccgtg
      181 cctccttgtc ggcaccttcg cactccatgg ctcgaacacc gtcatggcat cgtcgcggcc
      241 gcgaacgaaa atcttgccga gcgggcgaag cagcgattgg tcgcatcgag acgccgcaac
      301 aggtccgatg cagatcgagg agccgagctc cttgttggcg gcctcaagcc gggcggcaac
      361 atttacggca tcgccgtggg ccgtgtagtc aagcttggca cgaattccaa cgtcaccaac
      421 gattgcgggg cccgtctcaa ggccaatgcg cgtgcgtccg aagccgacca tcgcggcctc
      481 gcggcgatgc cggaaaatct ccgaccagga gtggagcgca actgcgcatt cgatggcttt
      541 ccgcggatga tcgtcgaggt cgctcggtgc gttgaataag gcatggacgg cgtcgccaac
      601 gatcttatcg atcattccgc catgggcgac aataatggtc gccattccct caaaataatg
      661 gtcgagggcg gccacgaggg cttccggatc ggcgtggtgg gtcattgctg tgaaaccgtc
      721 gatgtctgtg aacagcgctg tcacttcgcg ccgctcgcca catagcttca gcaagcgagg
      781 cctttcaaag attcgtcgca cgacggcggg cgccaggtgt tgctcgaatc gcgaccgcac
      841 caacgcttcg cggtggcggg tcgctgcaaa gaagatcacc gttgcgactg caaaagcggt
      901 cgtctcgatg aggacgcata gcaggcgtgc accggagccg gcggtgagcg tggaaagaac
      961 cactgacaca ctgcacccgc tcagaagcac gccggccatc agaactgcac ctattctggg
     1021 cgagagtgct gcgcccgcta ccaccgcaaa gcctgccctc aatgtgcgtt tcatgtcgcc
     1081 catctgcggt ttgctcggcc tgtcttatgt ccaggctatc tgggaatcga ctgcttcaat
     1141 cgctgttcac actttcttgg tgagtgctgt tatcttgttc gcgcaaatgc atgcggtaaa
     1201 tcagccgaac gtatcgctaa ggcggttgca ctgcggcgcg gcaaggtatc gaaagccttg
     1261 tctcacagac cttttttcct gtccggtgcg gtggtagggc gggatgcttt ggtattggga
     1321 gtgaagtatc agcgcagcac aggcgaagaa tgtcttgccc agaattctct ggccacagcg
     1381 aatttcgagg atgtggaagc cctgcagagt gggcagagcg aagcgtgcca accccaagag
     1441 cgcggcacgc cggcacggcg cgatccttag gcaagccctc aaggagaacg cctttgctca
     1501 tcctacaagt gagcgcctgc ctgacttaga cgattgagcg accggccgcg gccaaacctg
     1561 tctttttcaa aagccggttc aacattgtcc gcagtggcat tggatcgacc ggcttgtgga
     1621 gtagatgata gccgctgcgt tgtgcctcct gcagcaaagc ggggctgatg tctccgctaa
     1681 cgagaaacgc cggaataggg gacccgaatg cggtgcgcag ttgttcgatt gcgtctatgc
     1741 cggtgcgttg atcggtcaaa tgaaagtcgg aaataacaag atcgggcgga ccagcatcgg
     1801 cgagagcgat tagcgcctcc gcggccgagc gcgcggcgac gacccggcac ccccagctgc
     1861 gcagcagccc acccattccg tcgagcgcta gcgcgtcgtc gtcgatctcg acaatgagct
     1921 ttccggctgc gagattgagc ccgctgaggg ccggagctgg cggttcagcg gatttagtcg
     1981 acgctggaac caccggcaca acaacagaaa agcgcgagcc gctgccgaca cgagacgata
     2041 attcaatcgg atgttggagc aagcgacaca agcgatcgac gatggcaagg ccgagcccga
     2101 gcccaccgcc aagtcccctg cggtcgcgtt gcggatcgtc tagccggtag aactcgccga
     2161 atatcttttg gcgttgatca tccggaatac cgggccccgt atcgcaaatt tcaatgcgca
     2221 aatcttgacc gcgcctgcga cagccgatca aaataccccc gcgggcaacg taccggaccg
     2281 cattggacac cagattgaga aggatctgct ccaagagcac gaaatcactg cgaacccacg
     2341 cttgtgttgg aacgactcga aagtccaatc cgacctcctt tgcgaccccg gcaaaggtcg
     2401 tctggacccg ctcgaacagc ctggcgacag gaaattcggt gacgcttggc gtcagcgcgc
     2461 cggcatcgag cttggaaata tcgaggagcg ctttgaacag ctcgttgatc atggcgatcg
     2521 cagattcgat gcgctcgacg attcgattcc gctcggcggc ggtcgttgta ctgcgaagtt
     2581 gcgcaacgaa tagccctaag gcatgcagcg gctgccgtaa gtcgtgactc gccactgcca
     2641 gaaaccgcga tttggcgaag ttcgcaagct cgagctgatg ggtgcgctcc tcgaccttgc
     2701 gttcaagcga ggcatacgaa tcctggagct gcgctgccat gcgattgaat tgttcgccca
     2761 gcgcctgcaa ttcgtcgccg gattttatgc tgatccgctg gtcgagatcg cccctgccga
     2821 tgcgcgcagc accatcatgc agtgcgcgga tcggtatcgt cattcgacgt gcaagataga
     2881 ggcccgcgaa tgccgccaat gcgagcgctg caacgagcag cgccgcggac cgtcgaatcg
     2941 acccgtacaa gggcgcatag gcctcatcga ccggcagttc gacaaagacc agccagccga
     3001 gcggcgctat gggagcatgc acgctcagca cggggcgccc ctcgatgtcg tccgtcactg
     3061 gaggcagctc ggatggcgct gacgcgcctt cctggcgcgc cgcctcgacc tgggcgaggt
     3121 gcgacacgtc cgtattgcga agtaccatgc tgatatctgg atgagcgatc agccggccag
     3181 cggggtcgac cacataggcg cgcccgcgga cgccgacctg aatctgagac accacgtccc
     3241 agatgaattt gaggttcact tgcgcgacga tcacgccgta gtcgcgacgg acccccgcca
     3301 ttgcaatcgt catgtaaggc tcggattcac gaagaaaatg aatcggccca tagtagatct
     3361 tgttggcgac agctttgacg aaaaagtcgt cttgcgaata atcggtttgg ctgccgacca
     3421 catccgcggc gagacgtgaa acacgaacca gttcgcgtcc ggtggcgtcg agttgggcga
     3481 cctcggtcac cgctggtacc tggcgcaaca ggcgaacggc atcaaaccgc cattcgtcga
     3541 gcgtatcggg actccaggga agctgggtcg cccacgccaa ctggccctcg atttccttga
     3601 cgaagtaggc gatcttcgcc gccgcggctt tggcttgctc ctgctgactg cgcatcaata
     3661 ggatgttctg ttcgcggaac gagaaccaga tgtccaggac accattggcg accaaggccg
     3721 cgcacatgac agcaacgaag aggccgacat atttgcgaaa tagccgccgg cgcggggggg
     3781 gcgcatcgac tggccgcgat gctgcgggcg ttgtggcgtc ccgcagcgtc attcaatgac
     3841 ctcgtcggcg cgggcaagca tgattcttgg caccgtcagg cccagcatac cggcggcacg
     3901 ccggttgatg accagctcga tttttgctgg cgaaagcact ggaaggtcgg ccggtctcgc
     3961 gccgttaagg atgcggtgga cataggacgg cacccgccgg tacaaatcgg gcacgtcgat
     4021 tccataagat attaggccgc ccgcgtcggc gaaggaacga aacggataaa tcgccggcac
     4081 ccgataccgg gcagccgcct ccacgatcga ctcgcgatgc gcgcaggtga attggtccgg
     4141 caggacgatg atgccgccga cgggggcgcg tgccgccaag acactttcga tatccgttgg
     4201 ttcacgcaag agcgccacat caaggccgag cgacatcgag gccgctgcgg tctgtaatga
     4261 cggcaggaaa taggttccgc cagcgggagc cgaattagga ttgaacagag cagtgaaatg
     4321 ggtcgtgcca ggcgcgatct cctgaagcag ctccaaccat ttgccacaga acgaggcaag
     4381 attgccggtg aagcccgtag cgttgcggtt cggttgcgcc aggttggcaa caaaaccatc
     4441 gccgatggga tcggaggccg tcacgaacac gatgggaatc gtacgggttt cccgcaacaa
     4501 ggtgctggcg acgatgctgt tggcggcgac gatgacgtcc ggctgcaggg cgaggagctc
     4561 gttgccgagc gcgcggagcc catcggcctc gattgccgag cgataatgga tgcggatgtt
     4621 atggccctcg gtccaaccga ggtcctggag ggcctggcgg aatatggcta cgcggcgcaa
     4681 aacctccgga tcggtttccg ccagtcccat cagcacgccg atattgcgca accgcccgac
     4741 ggattgcccc agcgcgatcg gaggccaaag cgccacggcg ccggccaaca aagcaagtac
     4801 cctgcggcgt cccatgcgat ccacctcgct atggggacca agttaagcgc gagcgccctg
     4861 tttgaccgca agggctgttt cgagtgtgcc gaaagctcgc atgcgccgct cttgaccagg
     4921 tcgcccagaa aaaatttatt gtagccatcc tgcctgcggc caatggcatt gcaaatcatc
     4981 cggacgtccc agctagcggc cccaggcgcg tgcgtgtggt tgtgcaaaaa gcaaatggca
     5041 tcaataagtt cttagagttt tgaggggtct gtcgcttctc ccaggatcgc cgcctctccc
     5101 aagactaaag taccgaggcg tcggacactt cggctcccca tcgggcggtg tgtgctcttc
     5161 aatcgatcac ttgtgtggcg cgctgcaata cgatgcgcgg gacgtcgagg ccgatcgcct
     5221 tggcggtttt gaggttgagc gccatttcga accggaccgg cgcttgcacc ggcagatcgc
     5281 ctggtttcgc gcctttgaga atgcgatcga cataatccgc cgcgcgccgg aattggtcga
     5341 gtgcaaccgg cccgtaggaa atcaggccgc cgtcattgac gtagatcgga ttcggataga
     5401 ccgccgggaa gcgttgccgg gccgccaggg cgatgatcag gtcgcgatga ctcaacgcaa
     5461 ttgtgctcgc cgttacaatg agcccgccat ttccctcgcg tgcaaatgca gttaaggtgg
     5521 gctccatctt gtcccgctca cgcacgtcaa cggggctcaa ctccacaccg aaccttggcg
     5581 ccgcggagtg aattgcgaca agctgggcct ctccgcttgg tactgtagca tcccgaagca
     5641 ccgccacgcg tgtcacttgg ggggcgatct gcttgagcac ctccagccat tttccgctga
     5701 agctgtattc catctgaagg aagccggttg tattgccgcc tggtcggctg aggctctcga
     5761 caaagcctag ggcaaccgga tcgagagtca tggtgaacac gataggtacc ttattgtggg
     5821 acgctttttg caaggcgcct acgacctggc ccgaacgcgc caggatgatg tccggggcca
     5881 gtgcgaccaa ttccgctgca aactggcgat tgcgttcggc gtctcccgca ctccagcgaa
     5941 cgtccattcg caggttgtgg ccttccctcc agccccgatc gagcagcgcc tgccggaagg
     6001 tcgagagctc ggcttctcct tgtgggtcgc cctcggccaa agagacaagc acgccgatgc
     6061 gccgtgttcg gtcggcttgc tgcgcgcgcg tagccgatga ccaacccgcc gcagcggcaa
     6121 gaagagtgat gacatcccgt cgtcgcacga cctcatacct ttatgatagg cacttttgtc
     6181 atcgcgccat tcagtgtgac ggtcatcgtg tccgtcacat tgagttgcac gccgttcgca
     6241 gcgagatttt gaaccgcgga ttggttgacg atcagatcga agtccttgtt tggaacaggc
     6301 tggaacctat ttcggatatc tgctgttgtg agcaattgtg aaaggatggc gctaaggaat
     6361 tcacttgctg tccgccgata tagacctaat acatcggggc cgtatgatat caagccagcc
     6421 gcctcagggt gatttctgct atcggtaaag agggtgctcg ggtagatcac aggcagattg
     6481 ttgctggtcg caatgcgtgt gatgtcaagg cgagagccgg cggtcagggt gcccgaggtc
     6541 acgatgaggc cagcaggaga cgtatccgca caggcaaatc cgtctatggc gcacttcagt
     6601 gccatcgggt ccaaaccggc gtcgatgggc tggtcgaccg acaagccgag ctcgatggcg
     6661 ctgtcggtga tcattctgtt ttggtccccc atacaagggc gcgagcaatt cctatcgaaa
     6721 tcgtagataa ccgccgctct tttcacatca ggcgcgatct gcatgagcag agacggccag
     6781 ttcggacaca ggtctgcgag ttcaaatgct tcgatgccgg tgtcattagc accgtaggac
     6841 tggatcgtgg agtccgtcat gccagagtac acgacccctt tcagcggtgc gatggccaag
     6901 ctctgcatcg cgtcattcaa cgcctgcatg gtcggccagc aagaggcaaa gaaaatgcgg
     6961 gcatcaggat tggacttcac caaatcgatc gcaatactgc catagctatc gtagtcgcct
     7021 ccgccgtagc gatagtcgaa ggtaaacttg ggaagtccgc cctcaagaat cagtttgcgg
     7081 cgaagcgcct ccggatcggc cgatggcaaa ttcatgaaca caccaatgtc agccatttga
     7141 tgttctccga aagacgcccc gatttggggc taaagttaaa acataccaaa cgatgttgag
     7201 atatcatatc ttgctgttca gaggcaaaag cccacgcgga cgcaccgtga atccatccca
     7261 tggcatcgcc ctctgggtga ttttctgacg agccgccgcg ctttacgtga cgttgagaag
     7321 caagtatcct ttgaattaag cgctcgtttt ggtcggcgga cctctttcgg gtccctttat
     7381 gcccattggt ttgggtggca gccatattgg tgcacatgtt aaaaaaaacg gagccgagaa
     7441 ggagagcact gtgagtgtca gaggtgattt gaacgaatgc cgggcggacc aagggcaagc
     7501 tgaagtgatt ggtgttacgc ctccgaaagc agacaagccg gggccggctt tcattgtgcc
     7561 gtggcggctg aacgcaaatg cagcacgggc aggtggggag gacctgggcg atgcgagctg
     7621 cggttgcggt ccggtcgact gacgcttttt gtattttcgc caaatgtgac gcgtcggcgc
     7681 cattcagtcg ctcagcgacg cgctttgagg gggagcgcgg acaatgagcg cgctgaggag
     7741 cgctaacggg cttcgccccg caatcgacat cgggtaccgc gcgcccatcg atcactggac
     7801 gcgcgagaac cttgcgcaat tcgacgtcct cgagatcacc gttcgacgtc ctcgagatca
     7861 ccgtggacca ctgcatcggc agcggcgagt ccgtttcgga gagcggtgtt tgaaatgtcc
     7921 gctccggtct tcg
//
LOCUS       DATILV010000645         4610 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3991805, whole genome shotgun sequence.
ACCESSION   DATILV010000645 DATILV010000000
VERSION     DATILV010000645.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4610)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4610)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4610
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3991805"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..753
                     /locus_tag="VLJ17_15310"
     CDS             <1..753
                     /locus_tag="VLJ17_15310"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HSV24383.1"
                     /translation="FAIIPVTVNYAWRRELGAAFRTKRPLGISRGLIAVVSMFLNFAA
                     LARLPLADATAFSFAAPFITVVLATVILKERVRVYRWSAVLVGFFGVLVMLWPYLHVD
                     ALVAVGASASTVGTACAVTAAFTNAGATIQTRRLADSETTVSIVFYFSLICALAGLIS
                     LPFSWHAPSSIELAALTSIGVIRGSSHIFLTESYRYALGSVAAPFDYVALLWAHFFGY
                     VLFGEIPVLLRGRRHRGGFWPVRNLAQAPTRP"
     gene            complement(824..1060)
                     /locus_tag="VLJ17_15315"
     CDS             complement(824..1060)
                     /locus_tag="VLJ17_15315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018391378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HSV24384.1"
                     /translation="MIPFFVQIKCHLGKAYAVANALADAEIASEIYSTAGDFDLLVKF
                     YVEQGADIGHFVTEKVQPIPGILDTKTIITFKAF"
     gene            1279..2016
                     /locus_tag="VLJ17_15320"
     CDS             1279..2016
                     /locus_tag="VLJ17_15320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016844849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSV24385.1"
                     /translation="MHIQFVGSGDAFGSGGRFNTCFHVVGDEMNFLVDCGASSLVAMK
                     QLGIDRNAIDLIVLTHYHADHCGGVPFFILDAQFVARRTHPLTIAGPPPIREWFSRQM
                     EVAFAGSAHSAWRFEVSLVELAPDQPWHCRNAHIQSVRVRHGTPPESYHGYRIMIDGK
                     VLAFSGDTEWTDSLIELGREADLFVSESYVYDKPVQMHLAYRQLVEKLPLIRPKRLII
                     THMSDDMLGRGDAVMHETARDGLIVKI"
     gene            complement(2036..2959)
                     /locus_tag="VLJ17_15325"
     CDS             complement(2036..2959)
                     /locus_tag="VLJ17_15325"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV24386.1"
                     /translation="MSTPSGFAQEQTYPDHPVRIIVPIGPGGAYDIIGRLLASKLTEL
                     MRQTFFVENRTGAGTLVGTQAAAVAPADGYTLVVGGLSNIVFNFALYQKVPYEPDDLV
                     PVALVYTFPYLMVARNDLPQKDLAEIISYGRQSPGKLTVAHPGLGSGQQIVAAAFMKL
                     TSTTIVEVPYRGTQAAYPDLIAGRVDLLFDSVTAALPYVTAQKVRGIALLAPQRYPKM
                     PNLPTMTEAGLAGLGVESWIGLFAPARTPPEILARLRQETRTAAAALKDQFEKTGGTL
                     MQMPVAVTDKFIKSEFDLWTKVIRDAGIRLD"
     gene            3217..4194
                     /locus_tag="VLJ17_15330"
     CDS             3217..4194
                     /locus_tag="VLJ17_15330"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV24387.1"
                     /translation="MWPRVTALSFLIILMAAVVPARGQVASGFPAKPVKFIIPFPGGG
                     INDVLARIAADKLTAKWGQPVVVENKTGAGGNIGADFAAQAEPDGHTLFITPPGPLAI
                     NQSLYRQLSYRPEDFVPVTVLAAVTNLIIVRPEIGVNSVTELIAFAKHNPGKITYGSQ
                     GNGSTPHLTGCMFMTLTGVRMIHIPYRGENLVVNDMLGGHIDVFFGNIAPVLPHYRDG
                     KLKVLAVADVKRAAPIPDVPTAAEAGLPGFISTAWFAVAGPPKMPPALAQRLAADFAD
                     VLSMSDVQTKYRSVGAEPVGTTPVETVAFVQAEAARWREVITKNNIRIE"
     gene            4240..>4610
                     /locus_tag="VLJ17_15335"
     CDS             4240..>4610
                     /locus_tag="VLJ17_15335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HSV24388.1"
                     /translation="MEQLDLRLYAIVDPENTGGYDLVDLARAVAAGGATLVQLRDKVS
                     DTAAMIDRARALTRALSPFGVPLIVNDRADVALAADADGAHVGQEDMTVEQARRMLGP
                     GPFIGLSVRTVEQAAAAPLAL"
BASE COUNT          865 a         1413 c         1378 g          954 t
ORIGIN      
        1 ttcgccatca ttcccgtcac ggtgaactat gcgtggcgcc gcgaacttgg ggcagcattt
       61 cggaccaagc gaccacttgg catatcccgt gggctcatcg cagtcgtcag catgtttctc
      121 aatttcgcgg cgctggcgcg cctgccgctg gccgacgcca ccgcgttttc cttcgcggcg
      181 cccttcatca ccgtcgttct cgcgacagtc attctcaagg agcgagtgag ggtctatcgc
      241 tggtccgcgg tgctggtcgg gtttttcggc gtgctggtga tgctatggcc ctatctccat
      301 gtcgacgcgc tcgtcgccgt gggcgcatcc gccagcacgg tcggcaccgc ttgcgccgtc
      361 acggccgcat tcaccaacgc gggcgcgaca atccagacgc gccgcctcgc cgacagcgag
      421 accacggtct cgattgtgtt ctatttctcg ttgatctgcg cccttgctgg gcttatttcg
      481 ttaccgtttt cctggcacgc gccgagttcg attgaattgg ccgcgctcac ctcgatcggt
      541 gtgatccgcg gttcatcaca catttttctc accgaaagct accgctacgc actggggtcc
      601 gtggcggcgc cgttcgacta cgtggcgctt ctgtgggcac acttcttcgg ttacgtgctg
      661 ttcggcgaaa tcccggtact tctacgcggg cgccgccatc gtggcgggtt ctggcctgtt
      721 cgtaatctag cgcaagcgcc aactcggccc tgagcgggcg caaaagattc aatcgggttg
      781 atgtaacaac acgggatgac gtaacaacag ctgtgaaaaa aactcaaaac gctttgaagg
      841 tgatgatcgt cttggtgtcc agaatgcccg ggatgggctg gaccttctcg gtaacaaaat
      901 gcccgatgtc ggcgccctgc tcgacgtaga atttcaccag cagatcgaag tcgcccgcgg
      961 tcgaataaat ctcggatgca atctcggcat cggcaagcgc gttggctacc gcataggcct
     1021 taccgagatg gcatttgatt tgcacgaaaa atgggatcac acggttctcc ttgacggccg
     1081 gcagccgggt ccgcaatgca gcaaaaaccc agcgcgttga caagtcggca gaacgcccgc
     1141 agtgctaaga ggggctgaag cggattgcgg gcctgacatc gtagtgtggc tctgacaacg
     1201 atctacgacc gtcagggctt ggtaagtcgc aatcctgtac gtctttgacg tcatggcgcg
     1261 cagggtaagg acctggacat gcatattcaa ttcgttggca gcggcgacgc gttcgggtcc
     1321 ggggggcgtt tcaacacctg ctttcatgta gtgggtgacg aaatgaattt ccttgtcgat
     1381 tgcggcgcct catcgctggt cgctatgaag cagctcggca tcgaccgcaa tgcgatcgat
     1441 ctgatcgtcc ttactcacta tcacgccgac cattgcggtg gggttccttt ttttattctt
     1501 gacgcccagt tcgttgccag gcgtacacac ccgctcacca ttgcgggtcc tcctcccatc
     1561 cgggagtggt tttctcgcca gatggaggtg gcttttgcag gatctgcgca ctcggcttgg
     1621 aggttcgaag tatcccttgt cgagctcgcg cctgaccagc cttggcactg caggaatgcg
     1681 catatccaat ccgtccgcgt gcgccatggc acgccacccg aatcctatca cggctatcgg
     1741 ataatgatcg acggcaaggt gctcgccttc agcggcgata ccgaatggac cgacagcttg
     1801 atcgagctcg ggcgcgaggc tgatctattc gtgtccgagt cctatgtata cgataagccg
     1861 gtgcagatgc accttgctta ccggcaactg gtcgaaaaac tgcccttgat ccggccgaag
     1921 cgcctgatca tcacccatat gagcgatgac atgctcggcc gcggcgacgc cgttatgcac
     1981 gagaccgcgc gggacgggtt gatcgtcaag atttgatctg gcgaccttgc accgttcaat
     2041 cgaggcgtat tccggcgtcg cggatgacct tggtccacaa gtcaaattcc gatttgatga
     2101 atttgtcggt aacggcaacg ggcatctgca tcaaggtacc gccggttttt tcgaactgat
     2161 ctttgagtgc agccgccgcg gtccgcgttt cctgccgcaa ccgcgcgaga atctcggggg
     2221 gcgtgcgggc cggcgcgaac aggccgatcc acgattcgac gccgaggccg gcgagccccg
     2281 cctcggtcat agttggcaga ttgggcattt tcggatagcg ttgcggcgcc agcagcgcaa
     2341 tgccgcgtac cttctgcgca gtgacatatg gcagcgcggc agtcaccgaa tcgaacaaca
     2401 gatcgacgcg accggcgatc aaatccggat aggcggcctg ggtgccccgg tacggcacct
     2461 ccacgatggt ggtgctggtc agcttcatga aagccgcggc gacgatttgc tgaccgctgc
     2521 ccaaacctgg atgcgcgaca gtgagtttgc ccgggctctg gcgtccatag ctgatgattt
     2581 cagctaggtc cttctgcggc aagtcgttgc gggccaccat caggtacgga aaagtgtaga
     2641 cgagcgccac cgggactaaa tcgtcgggct cgtaagggac cttctgatag agcgcaaaat
     2701 tgaacacgat gttactcagc ccacccacca ccagggtgta accgtcggcc ggcgcgacag
     2761 ccgcggcctg agtaccgacc aatgttccgg ccccagtgcg attttcgaca aaaaaagttt
     2821 gccgcatcag ctcagtcaac ttgctagcca ataggcggcc gatgatgtcg taggcgccac
     2881 cggggccaat tggcacaatg atcctgacgg gatgatccgg gtaggtctgt tcctgggcaa
     2941 agcccgaagg agtcgacatg acggcggcaa gtgacgcagt cacggatatg gcgcaggaaa
     3001 ataacgattt gcggaactgc acaggacgtc tcggctctga ttcacggtcc ctagccttat
     3061 catatccagc ttggagctcc agtgaaacca cgcacaccgc atggccgttg cgttgcccac
     3121 gctgtcgtta gcgatcctta tgtaaccccg gctcctctgc gattgcgtcg cgtgatcgaa
     3181 ggcgtatcct gttcatcttc ggttcggagc atttgcatgt ggccccgtgt gacagcgctt
     3241 tctttcttga tcattttgat ggcggccgtt gtgccggcac gcgggcaggt tgcgtccgga
     3301 tttcccgcca agcccgtcaa gttcatcatt ccgtttccag gcggcggcat caacgacgtg
     3361 ctcgcccgca tcgcggccga taagctcacc gcaaaatggg gccaacctgt cgtggtcgaa
     3421 aacaagaccg gggccggtgg aaacatcgga gcagacttcg ccgctcaagc cgagcccgac
     3481 ggccataccc tgttcatcac gccgccgggc ccgctcgcca tcaaccagag cctctatcgg
     3541 cagctttcct atcggcctga agattttgtg cctgtcacgg tgctggcggc ggtgaccaac
     3601 ctgatcatcg tgcgtcccga gatcggggtg aattccgtca cggagttgat cgcttttgcc
     3661 aagcacaatc ctggcaagat cacttatggg tcgcagggca acggttcgac gccgcacctt
     3721 actggctgca tgttcatgac cctaacggga gtccgcatga tccacatccc gtatcgcggc
     3781 gaaaatctcg tcgtcaacga catgctcggc ggtcatatcg atgtcttctt cggcaatatc
     3841 gcaccggtgc tgccccatta ccgcgacggc aagctcaagg tactggcggt cgcggacgtc
     3901 aagcgggcgg cgccgatccc ggatgtccca accgccgccg aggccggatt gcccggtttt
     3961 atttccacgg cctggttcgc ggtggcgggc ccccccaaaa tgccgccggc actcgcacag
     4021 cggctcgcag cggattttgc ggatgtgctg agcatgtcgg acgtgcaaac gaaataccgc
     4081 tccgtcggcg ccgaaccggt cggaacgacc ccggtcgaaa ctgtggcatt cgtccaagcc
     4141 gaagccgcgc gctggcgcga ggtcattacc aagaacaaca ttaggatcga atgagcacca
     4201 tgcgctaagg acaagcggcc cctgttcgga ccgagctcca tggaacaact cgacctgcgc
     4261 ctctatgcca tcgtggatcc ggaaaacacc ggcgggtacg atctcgtcga tctcgcccgc
     4321 gcggtcgcgg ccggcggggc gacgctggtg cagttgcgcg acaaggtgag cgacaccgcc
     4381 gcgatgatcg accgggcgcg cgccctgacg cgcgcgctta gcccgttcgg cgtgccgctg
     4441 atcgtcaacg accgcgcgga cgtggcgctc gcggccgatg ccgacggcgc gcatgtgggc
     4501 caggaggaca tgacggtcga acaggcgcgg cgcatgctag ggccggggcc cttcatcggc
     4561 ctctcggtcc gcaccgtcga gcaggccgcg gcggcgccgc tcgcgctcat
//
LOCUS       DATILV010000646         2731 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4241978, whole genome shotgun sequence.
ACCESSION   DATILV010000646 DATILV010000000
VERSION     DATILV010000646.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2731)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2731)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2731
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4241978"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..717
                     /locus_tag="VLJ17_15340"
     CDS             <1..717
                     /locus_tag="VLJ17_15340"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF044283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase domain-containing
                     protein"
                     /protein_id="HSV24389.1"
                     /translation="LDPKNHDMEGPFAEFTGYIAGDRGPKPTIRVTAITHRNDPILRG
                     TIEGSLPGSYSENGVCSSIMRAATAWNVLDRAGVPGITDVWCPPVQAGINLLIQMKQS
                     YRGQAKQAANAIWGSSAAHVRYKHITVVDDDIDIHDYAAVDWAIAYRVNAGEGDIVIM
                     PSTFGAGLDPSTRRRDRNPALFGTGKWNRVLIDATMNLDYDPDPDLDGARFPPKVWPS
                     EGDIAAVARRWSEFGLKPLR"
     gene            856..1767
                     /locus_tag="VLJ17_15345"
     CDS             856..1767
                     /locus_tag="VLJ17_15345"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV24390.1"
                     /translation="MPLQIPSPRTTFDVLLEDGARIRLRRHGNPEGVRLFLSHGNGYA
                     INGYLPYWQHFLNRFDLIVFDFRNHGENAPAVPANHTYAQLSRDLEHVYRDVTAKLGE
                     RKSVGIFHSMSGRTAMKHALEIGFRFEALVLFDPPNVPPPNHPVYPAMEAFEVRLTEF
                     ARTRRIHFTSVDELATDFARSRVGQAWVPGVHELMARSLLRPNPDGDGFVLVCDPANE
                     AGIYAEALSMNLWPQASDFKRPVKLIGADPDLKGGPPTGRANQALGTENGYDYRFVPG
                     TGHMLQLEKPDECAQLTLAFLKECGLG"
     gene            1924..>2731
                     /locus_tag="VLJ17_15350"
     CDS             1924..>2731
                     /locus_tag="VLJ17_15350"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSV24391.1"
                     /translation="MQFGDLRGWIAHLKREGELHNVDAEVDWDCELGTITRRAFGNGD
                     GPALLFTNIKDYQHNARCTQLFTGGLSKYSRVALMFGLPKNAPITDLVQAARKAFSGR
                     LPPVRVTTGPVKENIITGDDINLYDFPVPRWHRRDGGRYINTMQGTVTRDPSTGRMNI
                     GIYRGMIGRKNTIPVLLWRPQNWGLDFAKYTGKGEEMPVAFIYGWEPCLPFCAASPVP
                     PDVSEYDVMGALRGAPVELVDCETVPLQVPASAEIVIEGWISPDPATFEME"
BASE COUNT          507 a          873 c          850 g          501 t
ORIGIN      
        1 ctcgatccga agaaccacga catggaaggc ccgttcgccg aattcaccgg ctacatcgcc
       61 ggcgaccgcg gtcccaagcc caccatccgc gtcaccgcca tcacccatcg caacgacccg
      121 atcctgcgcg gcacgatcga aggctcgctg cccggcagct attcggagaa cggcgtgtgc
      181 tcctcgatca tgcgcgcggc caccgcctgg aacgtgctcg accgcgccgg tgtgccgggt
      241 atcaccgacg tgtggtgccc gccggtgcag gccggcatca acctgctgat ccagatgaag
      301 caaagttatc gcggccaagc caagcaagcc gccaacgcca tctggggctc ctcggccgct
      361 cacgtgcgtt ataagcatat caccgtggtc gatgacgaca tcgacatcca cgactatgcg
      421 gcggttgatt gggcgatcgc ctatcgggtc aatgctggcg agggcgatat cgtcatcatg
      481 ccgtcgacct tcggggccgg tctcgatcct tcgacccgcc ggcgcgaccg taatccggct
      541 ctcttcggca ccggcaagtg gaaccgggtg ctgatcgacg ccaccatgaa tctcgactac
      601 gaccccgatc cggatctcga tggcgcgcgt ttcccaccga aggtgtggcc gagcgagggg
      661 gacattgctg ccgtggcgcg acgctggagc gaattcgggt tgaagccgct gcgatagtgt
      721 aaatccctcc ccgtcttcgg gagggtggac gcgcgtagcg catccgggag gggtgacaca
      781 ggcaatgccg tgccgtggaa agaaaccctc cctgccctcc gccaagacct gagagatcaa
      841 gaaaggacca ccccaatgcc cctgcaaatc ccgtcgccgc gcacgacctt cgacgtcctg
      901 ctggaggacg gcgcacggat tcgcttgcgc cggcacggca acccggaggg cgtgcggctg
      961 ttcctgagcc atggcaacgg ctatgccatc aacggctatc tgccgtattg gcagcacttt
     1021 ctgaaccgct ttgatctcat cgttttcgat tttcgcaacc atggtgaaaa tgcgccggcc
     1081 gtgcctgcca atcacaccta cgcgcagctc agccgcgatc tcgagcatgt gtaccgggac
     1141 gtcacggcga agcttggcga gcggaagtcg gtcggcatct tccactccat gtcgggccgc
     1201 actgccatga agcacgcgct cgagatcggc tttcgcttcg aagcgctcgt cctgttcgac
     1261 ccgcccaatg tgccgccgcc aaaccatccg gtttatcccg ccatggaggc tttcgaggtg
     1321 cggttgacgg agttcgcccg gacccgccgc atccatttca ccagcgtcga cgagttggcc
     1381 accgacttcg ccaggtcgcg cgtcggccaa gcctgggtac cgggcgtgca cgagctgatg
     1441 gcgcggtcgc tgctgcgccc gaacccggac ggtgacggtt tcgtgctggt gtgcgacccg
     1501 gcgaatgaag ccggcatcta tgcggaggcc ttgtccatga acctgtggcc gcaggcaagc
     1561 gattttaaga gaccggtgaa gctcatcggc gccgacccag acctcaaggg cggcccgccg
     1621 accggtcgcg ccaatcaagc actcggcacc gagaacgggt acgactaccg cttcgtgcct
     1681 ggcaccggcc atatgctaca gcttgagaag cccgacgaat gcgcgcagtt gaccctggcg
     1741 tttctgaagg aatgcgggct ggggtagccc ggatttcgca accgcctgcg gtcgcgaaat
     1801 ccgggagcgg cggtacgact ttggaaaagg ggtcccggat tatccgccgc ttcatgcggg
     1861 ctatggccct ggggtaatgt tcgggtctcg caatgcgcgg gcacaatggg tcgggagaaa
     1921 tatatgcagt ttggtgattt gcgcggatgg atcgcgcatc tgaagcggga aggcgagctt
     1981 cacaacgtcg atgccgaagt agactgggat tgcgagctcg gcaccattac gcggcgcgcc
     2041 tttggcaatg gcgacgggcc cgccttgctg ttcaccaaca tcaaggacta ccagcataac
     2101 gcgcgctgca cccagctttt caccggcggc ctgtcgaaat attcgcgcgt cgccttgatg
     2161 ttcggcctgc ccaagaacgc tcccatcacc gacctggtgc aggccgcccg caaggcgttt
     2221 tcgggtcgcc tgccgcccgt ccgggttacc accggaccgg tgaaggaaaa catcatcacg
     2281 ggcgatgata tcaatcttta cgactttccg gtgccgcgat ggcatcgccg cgatggtgga
     2341 cgctacatta acaccatgca gggcacggtg acgcgcgatc cctcgaccgg ccggatgaat
     2401 atcggcatct atcgcggcat gattggccgc aagaacacca tcccggtgtt gctgtggcgg
     2461 ccgcagaatt ggggcttgga ctttgccaag tacaccggca agggcgagga gatgcccgtt
     2521 gctttcatct acggctggga gccgtgcctc ccattttgcg ctgcctcgcc ggtgccgccg
     2581 gacgtgtccg aatatgacgt gatgggcgcg ctacgcggtg cgccagtgga actggtcgat
     2641 tgcgaaaccg tgccgctgca agtgccagct tcggccgaga tcgtgatcga gggatggatc
     2701 tcacccgatc cggcaacgtt cgagatggaa g
//
LOCUS       DATILV010000647         3060 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3733536, whole genome shotgun sequence.
ACCESSION   DATILV010000647 DATILV010000000
VERSION     DATILV010000647.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3060)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3060)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3060
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3733536"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..455)
                     /locus_tag="VLJ17_15355"
     CDS             complement(<1..455)
                     /locus_tag="VLJ17_15355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018323185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV24392.1"
                     /translation="MVDDHVLIREALRGVLKEVKSDAIVLEASTCSQAMQVIAEHPGL
                     KLILLDLNLPDRDGFSVLTELGERYPAISVVVLSAQQDRGSVVRALDLGALGFIPKSG
                     QREVMLGALQLVFAGGIYIPPEILARDEPSAQRYDEKQPVTNRPSVSPAG"
     gene            441..626
                     /locus_tag="VLJ17_15360"
     CDS             441..626
                     /locus_tag="VLJ17_15360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24393.1"
                     /translation="MIIDHQYFHVADSFYINENNTSFPGLKHPLPVVAPNKKVTDKRA
                     LSPGAAVSTDSIGHTSG"
     gene            708..893
                     /locus_tag="VLJ17_15365"
     CDS             708..893
                     /locus_tag="VLJ17_15365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24394.1"
                     /translation="MFTRTAFALAFVLAAASGALAATKQSFEPRQDVYDARGTYVGSD
                     PDANVRLELRRDSDRGN"
     gene            1040..1378
                     /locus_tag="VLJ17_15370"
     CDS             1040..1378
                     /locus_tag="VLJ17_15370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24395.1"
                     /translation="MRKHLLNSSVLSAAVALCLGAVSNNTIAGSFTRGCAARDLQILM
                     LIEERENASAISAERLSDAMLTILNARMICYEGHVIDALAIYDGVAESLASNDLNRKR
                     SVDLTTGRAR"
     gene            1508..2626
                     /locus_tag="VLJ17_15375"
     CDS             1508..2626
                     /locus_tag="VLJ17_15375"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HSV24396.1"
                     /translation="MTKGIVNRLLGVVALGLAVAVGNAAANASGRFPADQMGGALSLA
                     PLLNQIKMAVVTVAITGSFGPEKRSSPNNGQRPRRSTDTRELPAGRQTKMTGSGVVVD
                     ALEGLVVTNSHVIDGADEIIVTLADGRQALAQRVGSDPGTDVAVIKVHAQDLTALSIG
                     DSDALEVGDFVLAVGNPYRIGQTVTSGIISGLHRMNVGIEDYEDFIQTDAAIYPGNSG
                     GALVNLRGALIGINTAFIGATNSNPGMGFAIPINMVRAVVDQLLKYGEVRRGRLGITF
                     NESTPALIHSLKLSAPMTAPVIVKVEKGSPAEGAGLKVGDVVSQFANISVRDTSDLRN
                     RMGLLSAGDVADLTVVRNGRPVVIRATIADQEKHTRSR"
     gene            complement(2748..>3060)
                     /locus_tag="VLJ17_15380"
     CDS             complement(2748..>3060)
                     /locus_tag="VLJ17_15380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24397.1"
                     /translation="TVNNALMSSGIRNTSGARIQISLCPQSLARVSKKSSARCCHLKL
                     DLIIRLMTTCGVHADFIFIWFFLFAHKGQTAMTLRIPDSRAVCQDQDRGSRLKRKGRS
                     C"
BASE COUNT          689 a          878 c          868 g          625 t
ORIGIN      
        1 ccggctggcg agacacttgg ccgattggtg actggctgct tttcatcgta ccgctgagcc
       61 gatggttcat cgcgagcaag gatttccggc ggaatgtaga taccgccagc gaagaccaat
      121 tggagcgcgc ctagcatgac ctcgcgctgg cccgatttag gaatgaaacc gagcgcgccg
      181 agatcgagag cccttacgac gctgccacgg tcctgttggg ccgacagcac caccaccgaa
      241 atcgcaggat agcgttcgcc caattcggta agcacggaaa atccgtcacg atccggcagg
      301 ttcaggtcaa gcaagatgag ctttagcccg ggatgctctg caatgacttg catcgcctgg
      361 ctgcaagtag acgcctccag cacgattgca tcgctcttga cctccttgag aacgccgcgc
      421 agcgcctctc gaattaatac gtgatcatcg accaccagta tttccacgtc gccgattcct
      481 tctatatcaa cgaaaacaat acttcattcc caggactgaa gcatcccctg cctgtggttg
      541 caccaaacaa aaaagtcact gacaaacggg cactttcgcc cggcgcggcg gtttccacgg
      601 atagcatcgg ccatacgtcg ggctgattta cccgcccccc tcgcctcacc atgatgcgag
      661 ccgcaccaag acggtgtggg taacaaactc aaacaggaga tgtcgccatg ttcactagga
      721 ctgccttcgc gcttgctttc gtcctcgccg ctgcatctgg cgcactggcc gcaacgaagc
      781 agagcttcga gccccgtcag gatgtatacg acgctcgcgg cacgtatgtc ggctccgacc
      841 cggacgccaa cgtgcgcctt gagctgcgtc gggactcgga tcgcggcaat taacgcgtcg
      901 tgagaagggc aaagcggcca gccctgctgg ctggccgctg tcccgaactc tccacagtcg
      961 gcgccgagaa cgcggcccga caggtcatat taagcatcga gcaaattttc agttttacca
     1021 gatttccggg agatccgccg tgagaaagca tctgctcaac tcctcagtcc ttagtgccgc
     1081 agtggcgttg tgtctgggcg ccgtaagcaa caacacgatc gccggctcgt tcacacgagg
     1141 atgtgcggcg cgcgacctgc aaatcctcat gctgatcgaa gaacgggaaa acgccagtgc
     1201 gatttctgca gaacgactga gcgatgccat gctcacgata ctgaacgcgc ggatgatatg
     1261 ttatgagggg cacgtgatag atgccctcgc aatctacgac ggcgttgccg aaagccttgc
     1321 aagcaatgat ttgaaccgaa aaagatcggt cgatctgacc accggaaggg cgcggtgacg
     1381 tcgccggcaa aatcccgcaa aaccgaggcc cgccgcattc aaccagaggg ggccttacgc
     1441 agacagtccg acaagtgtgc gccagcaatg ttttcacggg tctcattggc gaaaagagaa
     1501 cacctccatg acgaaaggca tcgtgaatag actgctcggt gtggtggcgc tgggtctcgc
     1561 ggtcgccgtc ggcaacgctg ccgccaacgc gagcggtcga ttcccagccg atcagatggg
     1621 cggcgcactc tcgcttgccc cgcttctcaa ccaaataaaa atggctgtgg ttacggtggc
     1681 tattacgggc agctttggac cggaaaagag gtcctcaccg aataacggcc aacgcccccg
     1741 acggtccacc gacacacgcg aacttccggc cgggcgtcag acaaaaatga caggctccgg
     1801 tgtcgtcgtc gatgcactag aaggactggt tgtcaccaat agtcacgtga tcgacggcgc
     1861 tgacgaaatc atcgtcaccc tcgctgatgg tcggcaggcg ctggcccagc gcgtcggctc
     1921 agatcccggc acagatgtcg ccgtcatcaa ggtgcatgct caggatctga ccgcgctgtc
     1981 gatcggcgat tcggacgcgc tggaggttgg cgacttcgta ctcgctgtcg gcaaccccta
     2041 tcggatcggt cagaccgtga cgtcagggat tatcagtgga ctgcaccgga tgaatgtggg
     2101 catagaggat tacgaggatt tcattcaaac cgatgcggct atctacccgg gaaattcggg
     2161 gggagcgctc gttaatctcc gcggcgcgct catcggcatc aatacggcct tcattggcgc
     2221 gaccaacagc aacccgggca tgggttttgc catcccgata aatatggttc gcgctgtcgt
     2281 ggaccagctg ttgaaatacg gcgaagtgcg ccgaggccga cttggaatta cgtttaatga
     2341 atcgactccg gcactgattc atagtctgaa actctccgcc cccatgaccg cacctgtcat
     2401 tgtgaaggtc gaaaagggat cgccagcgga gggcgccggt ctaaaggtcg gagatgttgt
     2461 atcgcaattt gccaacatat ctgtgcgcga tacgtcagat ctgcgcaatc ggatggggct
     2521 tctttcggcc ggcgatgtcg ctgatctcac ggttgtgcgc aacggtagac cggtggtaat
     2581 ccgcgcgaca atcgccgatc aggagaaaca cacccgatcg agatgagggc aattttatta
     2641 atgttgggtc gtttctgtac ctcgaattcg catttgcggc caactaattg gtggaatttc
     2701 gtttggtata gcggctaata gatttcagcc gatgactggc agggtcgtca acaactgcgg
     2761 ccctttcgtt tcaagcgtga gcctcgatct tggtcttggc acaccgcccg gctatcgggg
     2821 atgcgaagcg tcatggcagt ttgccccttg tgagcaaaga ggaagaacca aatgaaaata
     2881 aaatcggcgt ggaccccgca agtggtcatc agccttatga tcaaatccag ctttagatgg
     2941 cagcaccgtg cagagctttt tttcgaaacg cgggctaagc tctgcgggca aagagaaatc
     3001 tgaattctcg cacccgaggt gttcctgatg cccgaggaca ttagcgcatt gttcaccgta
//
LOCUS       DATILV010000648         5434 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1433607, whole genome shotgun sequence.
ACCESSION   DATILV010000648 DATILV010000000
VERSION     DATILV010000648.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5434)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5434)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5434
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1433607"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..356
                     /locus_tag="VLJ17_15385"
     CDS             <1..356
                     /locus_tag="VLJ17_15385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008134811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IclR family transcriptional regulator C-terminal
                     domain-containing protein"
                     /protein_id="HSV24398.1"
                     /translation="KVMLASLSEEQLKGFVQRVELKPSTKNSITEVPALLREIAEVRR
                     AGIAFDKGEFNLEVRCIAVPVSDFTGRVVGALGVSGPIWGQNSQAQQVKAKFLQAAAA
                     RLSAAFGAKDANAPQ"
     gene            487..1767
                     /locus_tag="VLJ17_15390"
     CDS             487..1767
                     /locus_tag="VLJ17_15390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008134822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV24399.1"
                     /translation="MRRTKQRVHREATAMARYNRRRVLQTGAAFVGASAIGFPAIVSG
                     QTGKIKIGHLTPLTGFLGALGAYAQLGLRMAEEEINKAGGIMGRQIEISSEDSVNPAT
                     AATKAQRMLEQDGAAILMGEINSASALTIMQVAARNKRFYLQIGARSDALRGKNCNRY
                     TFHVDIPSHVMVYAVGKALVRDNLMKDKKFFTLTADYIFGHDLAAAAKTFFGENGGKL
                     IGDELVATDVTEFSPYLLKIRQAKPDVVCSNLAGNQVTNLIKQYAEFGLPYPIVGFNL
                     NTADAWATGDGNLSGTWPTVWHHDLDVPSSKTFVANFIKKYGKPPENHAWIEYISLKI
                     VAQAVTETKSTETEQLIAYFEKEPQFDILKTRKGYFRKWDHQLMQEAYPFTVKPKGKA
                     RDQWDMLELGKAVPGPNESLEVLSVAKEQNSCVM"
     gene            1846..2724
                     /locus_tag="VLJ17_15395"
     CDS             1846..2724
                     /locus_tag="VLJ17_15395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020091907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSV24400.1"
                     /translation="MQFTFLLEQVVNGLVLGGYYLLIALGLSLIFSVGGVVNLAHGAF
                     YALGAYISISIAKYLGFGPSVVLSPIAVALLGILFERFLLRRFYAADPILSLLVTFGL
                     AMIAEQIIRIIWGAAPLSVNIPAEFKGSVFIGDFLFSRYRLLLLAVVVTVLTAIWLLL
                     NKASFGRVVRAGIQRPDMVAALGIHLQPYMTAIVMVGVGMAALGGALFAPITIVHPAM
                     GAEVITVAFVVVVIGGLGSFWGVVMSALLVGVVRGITIHFIPAAGEASMYLLMFLVLI
                     FRPRGLLGERIEKFET"
     gene            2721..5270
                     /locus_tag="VLJ17_15400"
     CDS             2721..5270
                     /locus_tag="VLJ17_15400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008134825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     ATP-binding protein/permease"
                     /protein_id="HSV24401.1"
                     /translation="MTKKNARPHLKWQPLWISAVALIVLPFAMRACGLTTDSAATVVI
                     LAVAATGLNLCVGYAGLVSFGHGAWFGIGAYAAALIQRAWFPNQIAVPILFSMAVVAG
                     LATIAGMIILRRRGVYFSLLTLALSALTYTIAFRWTEVTGGENGLGELQRGRIGSINL
                     DNPISYYALVALIAIGVLYVLIRLLRSPFGHVVVAIRENQLRATFQSYQVERYRLVVF
                     VLSAIITGLAGSLLGFLTYLVSAEGVSVAFSGELLAMVVIGGMKNMLGPAFGALFFIL
                     FRELFSIWTANWLLWFGLIFVGFVVFSPSGLVGIWALLRRRWRPVPQEGAAMGSRKLY
                     DDVSLPALLRPQGTTGTALSVDRVSKHFGGIRAVTQASLTVEAGEIHALIGPNGAGKT
                     TVFNLVCGLYAPNSGTIRLHDKRIYRLSPDQICSKGLARSFQITNLFRGLSVYENVRL
                     SLQAQHLKRFNAWTDIDELIEVHAETAELIRYLGLEGIEHMQAGALSYGGQRLVDLGI
                     ALGCKPQVLLLDEPLAGLPNAERERVSQLVKNIAVNIPVLIVEHDIDRVLSLSDRVTV
                     MNEGEILMTGTPDEVRNDPRVQEIYTGTGVTEIAYSPHVARAGVEPKQILRAEGINTF
                     YGKSHILHDAALDVHEGEIVALVGRNGAGKTTLLRTLNGLVPPACGTIEYEGRNIAGM
                     PAPDIARLGVGYVPQGRQLFAGMSVAENLALGRLARATDGKDGIVWSEDRIFEYFPRL
                     KERVNVAADFLSGGEQQMLAVARAMSGNVKLLLLDEPFEGLAPNIVKDLFKVFDELRG
                     RTSIIIVEHNLDLVLALADRVFALERGAVFHQGPALPLLTDLAYRKQILWV"
BASE COUNT         1082 a         1536 c         1608 g         1208 t
ORIGIN      
        1 gcaaggtgat gctcgcctcg cttagtgagg agcaactcaa gggctttgtt cagcgcgttg
       61 aacttaagcc gtcaaccaag aactcgatca cagaagtacc ggcgctgctt cgtgaaatcg
      121 ccgaggtacg acgcgccgga attgcgttcg acaagggcga gttcaatctc gaggtgcgct
      181 gcatcgccgt gccggtgagc gacttcaccg gccgggttgt cggtgcgctt ggcgtttccg
      241 gtccgatctg gggccagaac agccaggcgc agcaagtgaa ggccaaattt cttcaagccg
      301 ccgccgctcg tctgtctgca gccttcggcg ccaaagacgc aaacgcgccg cagtgagcgc
      361 cgcgaccacg ggagtcgtga ccgcgacggt gaggcgcacc ccgcttttga cattgacagg
      421 tggccaggac ttggaattac ctgttcaata ttaaaacact gcatctcaca atgtcgtata
      481 ggtgggatga gaagaacaaa gcagcgcgtg caccgggagg cgaccgcgat ggctcgttac
      541 aatcgaagac gcgtactgca aaccggcgcc gcgttcgtcg gcgcttccgc gattggtttt
      601 cctgcgatcg tcagcggcca aacaggcaag atcaaaatcg gccacctgac gccgctcacc
      661 ggcttccttg gtgcgctcgg cgcctacgca cagctgggcc tcagaatggc agaggaggaa
      721 atcaacaagg ccggcggcat tatgggccgc caaattgaga tttcgtcgga ggactctgtt
      781 aatccggcga ccgccgccac taaggcgcaa cgtatgctcg agcaggacgg cgccgccatt
      841 ttgatgggcg aaatcaactc ggcctcagcc ctgacaatca tgcaagtagc ggcccgcaac
      901 aagcgctttt acttgcagat cggcgcgcgc tccgacgcat tgcgcggcaa gaactgcaac
      961 cgctacacct tccacgtcga tatcccgagc cacgtgatgg tctatgccgt cggcaaagct
     1021 ttggtacgcg acaatctaat gaaggacaaa aagttcttca cgctgacggc tgactacata
     1081 tttggccacg atctggcagc cgcggccaag accttctttg gcgagaatgg cggcaagttg
     1141 atcggtgacg aattggtcgc caccgatgtt accgaattca gtccctacct cttgaagatc
     1201 cgtcaggcga aacccgatgt tgtctgctca aatctggccg gcaatcaggt caccaacctg
     1261 atcaagcaat atgcggaatt cggccttccc tatccgatcg tcggcttcaa tctcaatacg
     1321 gctgacgcct gggcaaccgg agacggcaac ttgagcggca cgtggcccac agtttggcat
     1381 catgatctcg atgtgccgtc ttcaaagacg tttgtcgcga acttcataaa aaaatatggc
     1441 aagccgccgg aaaatcatgc ctggatcgag tacatatcgc tcaaaatagt cgcgcaggcg
     1501 gtgaccgaga cgaagtctac cgaaacagag cagctgattg cctacttcga gaaggagccg
     1561 cagttcgaca tcctcaaaac gcgcaaaggc tacttccgca agtgggatca ccaactgatg
     1621 caggaagcct atcccttcac ggttaaacct aagggaaagg ccagagatca atgggacatg
     1681 ctggaactcg ggaaagctgt tccaggacca aatgagtcgc tcgaggttct gtcggtcgcg
     1741 aaggagcaga acagctgcgt tatgtgattg cgggccaacg cctttttggt ttgcgtatca
     1801 gcaagttagc tgtgccacca atgcctccct ggcagcggag ctcgaatgca attcacattt
     1861 ttgcttgagc aggtggtgaa tggccttgtg ctcggcggct attatctgct tatcgcttta
     1921 gggctatcgc taatcttcag cgtcggcggt gtggtaaacc tcgcgcacgg cgccttctac
     1981 gcgcttggag cctatatttc gatttccatc gcgaaatatc ttggtttcgg cccgtctgtt
     2041 gttctgtcac cgatcgcggt ggcgttgctc ggcattctgt tcgagcgctt tctcttgcgc
     2101 aggttctacg ccgcagaccc gatcctcagc ctcctggtga ccttcggtct ggcgatgatc
     2161 gcagaacaga tcatacgcat aatctggggc gcagcaccgt tgtccgtcaa catacccgcc
     2221 gaatttaagg gatcggtttt catcggcgat tttctgttct cgcgctatcg gctactgctg
     2281 ctggccgtgg tggttacggt gctcacagcc atttggctgc tcttaaacaa agcatcattt
     2341 ggccgcgttg tgcgcgctgg aattcagcgg cccgacatgg tcgcagcgct cggcattcac
     2401 ctgcagccat atatgacagc gattgtgatg gtcggagtcg ggatggccgc gctgggcggc
     2461 gccctgtttg ccccgattac gatcgtacat ccggcgatgg gagctgaagt gattaccgtc
     2521 gcattcgtcg tggtcgtcat cggcggcctg ggtagctttt ggggcgtagt gatgtcggct
     2581 ctgttggttg gcgtcgtccg cggcatcacc atccatttta tccccgcggc cggtgaagcc
     2641 tccatgtacc tgttgatgtt tctggtcttg attttccggc cgcgtggact gctcggcgag
     2701 cgcatagaaa aattcgaaac gtgacgaaaa aaaacgctcg cccgcatttg aaatggcagc
     2761 cgctatggat ctcggcggtc gcattgatcg tcttgccgtt tgcgatgcgc gcgtgcggac
     2821 tgaccactga ttccgccgcg acggtggtca tactagcggt cgctgccaca ggactgaacc
     2881 tgtgcgtcgg ctacgccggg ttggtttcgt tcggccacgg cgcctggttc ggcataggtg
     2941 cctacgcggc tgctctcatt caaagagcgt ggttcccgaa ccaaattgcg gtgcccatcc
     3001 tcttttcaat ggcagttgtt gcgggtctgg caactatcgc cggcatgatc atccttcgtc
     3061 gacgcggcgt gtatttttcg ttgttgacgc tcgcactgtc cgccctcacc tacacgatcg
     3121 cattccgttg gactgaagtg accggcggag aaaatgggtt gggtgaactg cagcgcggcc
     3181 gtattggttc gatcaacctg gataatccga tctcctatta tgccttggtt gcactgattg
     3241 ctatcggggt tttgtatgtt ttgatacgcc tactgcgctc cccgttcggc catgtggtgg
     3301 tggcaattcg ggaaaaccaa ctgcgtgcca cgtttcaaag ttatcaggtc gaacgctaca
     3361 ggcttgttgt gtttgtgctc tcggcgataa tcaccggcct tgccggctcg ctgcttggat
     3421 ttctgacata cctcgtctcg gcggaaggcg tgtccgtcgc attctcaggc gaattgctgg
     3481 ccatggtcgt catcggcggc atgaagaaca tgctgggacc cgcatttggc gcgttgttct
     3541 tcatcctctt ccgcgaactt ttttcgattt ggaccgcgaa ttggctcctt tggttcggtc
     3601 ttatcttcgt tggctttgtg gtgttttcgc cgagcgggct cgttggcatt tgggcgctgc
     3661 tacggcgacg ctggagaccg gttccacagg aaggtgccgc gatgggctcg cgcaagctct
     3721 acgacgacgt gtcgttgcca gccttgctgc gcccgcaagg caccaccgga acggcgctgt
     3781 ccgttgatcg cgtttcgaag cactttggcg gcatccgcgc cgtgacacag gcgagcctca
     3841 ccgtcgaggc aggcgaaatt cacgccctga tcggcccgaa cggtgccggc aaaacgaccg
     3901 tcttcaacct cgtgtgcggt ctttatgcac caaatagtgg gacaattcgg ctccacgaca
     3961 aaagaattta ccgtctgtcg cccgatcaga tctgcagcaa aggactggcg cgctcctttc
     4021 agatcacgaa tttgttccgt gggctctctg tctacgagaa tgtgcgcctg tcgctgcagg
     4081 ctcagcacct caagcgcttc aacgcctgga cggacataga cgagctaatt gaggtgcatg
     4141 ccgaaacggc cgagttgatc cgctatctcg gactggaggg tatcgagcac atgcaggctg
     4201 gagcgctgtc ctacggcgga cagcggctgg tcgacttggg gattgcgctc ggctgcaaac
     4261 cgcaagtcct gctgctcgat gagccgctgg cggggctgcc gaacgccgaa cgcgaacggg
     4321 tttcccaact ggttaagaat atcgccgtca acattccggt gctgatcgtc gagcacgaca
     4381 ttgatcgcgt gctcagtttg tccgatcgcg tcaccgtgat gaacgagggc gagatcctca
     4441 tgacgggcac gcctgacgag gttcgtaacg acccgcgtgt gcaagaaatc tataccggca
     4501 cgggtgtgac cgaaatcgca tacagtccgc acgtcgcccg cgccggggtc gagcccaagc
     4561 aaatcctgcg cgctgagggc atcaatacct tttacggcaa gagccacata ttgcacgacg
     4621 cggctctgga cgtgcacgag ggcgagattg tcgcgcttgt cggccgtaac ggagcaggca
     4681 agacgacgct gctacgcaca ctcaacgggc ttgtaccacc ggcctgcgga acgatcgaat
     4741 atgagggccg caatatcgcc ggcatgccgg cgccagatat cgcgcgtctt ggcgtgggct
     4801 acgtaccgca agggcggcaa ttgtttgccg gtatgtcggt cgcagaaaat ctggcgcttg
     4861 gacgcctggc gcgcgcgacc gacggcaagg atggtatcgt ctggagcgaa gatagaattt
     4921 tcgaatattt ccctcgattg aaagaacgcg tgaacgtcgc ggcagatttc ctgtccggcg
     4981 gcgagcagca gatgctggcc gtggcgcgcg cgatgtcggg caatgtcaag ctgctgttgc
     5041 tcgatgaacc gtttgaggga cttgcaccca acattgtcaa agacttgttc aaggtcttcg
     5101 atgagctccg cgggcgcacc tcgattatca tcgtcgaaca caatctcgac ctggtgctgg
     5161 ccctggccga ccgagtgttc gcgttggagc ggggcgcggt gttccaccag ggacctgcgt
     5221 tgccgctgct caccgacctc gcttaccgca agcaaatatt gtgggtctga cggtcgaggc
     5281 ggggtgcgcc cgatgaagca attcctgaca ggagcagcat ggaaagaacc cgcgacagcc
     5341 gcgaattgtg gagatgagta gaccgtcacg ccatctagtt gtgatcggcc agggcgccgc
     5401 gggattggct gcagcgctga ctgcggccga acaa
//
LOCUS       DATILV010000649         3764 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2966962, whole genome shotgun sequence.
ACCESSION   DATILV010000649 DATILV010000000
VERSION     DATILV010000649.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3764)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3764)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3764
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2966962"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            375..1940
                     /locus_tag="VLJ17_15405"
     CDS             375..1940
                     /locus_tag="VLJ17_15405"
                     /inference="COORDINATES: protein motif:HMM:NF028178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HSV24402.1"
                     /translation="MAMLRHVVARRAGGSISGISLGLFGAAAVALLASSDPVGAVSEF
                     GTRDEAVAMVHRVQDMYKKLGLEATTQAIRRKAPGTIDRDLYAYIIDFNGLVVANGAI
                     PTMTPGTNLINFRDQNGKYVMRAELEICKGPQQRGWVDFRWLNPATQSIDDKSAYLER
                     LGTESMCVGVGIYRNEQINENTVAIISGSPSADDTYLQVANDLASILNDSDRLRILPI
                     VGIGGHQNIRDVRYLKGVDIGLTQLSVLNSFRNSNQTLGKYDDKIVYIGKLFNEEVHL
                     IARSEITSIEQLNGRKVNIDEERSGTTQTMRDVFKRLGIKVEEVNVTQGQAFEKLKSG
                     EIVATAYVAGKAAKLISNLKFERGMHFLQVPYSSEIAAEYLPTDLTHDDYPDLIPAGQ
                     TIQTIADEVILIGYNWPKNTDRYRRVQRFVEAFFPKIEEFWKAPNHPKWREVNLAVTV
                     KGWKRFEPADEWLAAHRNPEVAANVQQTNLQSSAPSQGGTSAVRGLLPNPSSADAQLY
                     QEFLKWKQSQPNR"
     gene            complement(2057..2548)
                     /locus_tag="VLJ17_15410"
     CDS             complement(2057..2548)
                     /locus_tag="VLJ17_15410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009797498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RatA family
                     toxin"
                     /protein_id="HSV24403.1"
                     /translation="MPQFSTRRRVGHAAADMFDLVADIERYPEFVPLCRAMQVRRRTQ
                     LGDREVVVAEMTVAYKLIQETFTSRVTLDRERQTILVEYLDGPFSRMENRWVFRPLDN
                     RAGAAAGAAEAACEIEFFISYEFRSRTLGLLMGAMFDAAFRRFASAFEHRADAVFGPV
                     RMV"
     gene            complement(2585..3577)
                     /gene="lipA"
                     /locus_tag="VLJ17_15415"
     CDS             complement(2585..3577)
                     /gene="lipA"
                     /locus_tag="VLJ17_15415"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016992 - lipoate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009107 - lipoate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HSV24404.1"
                     /translation="MVVVLDTVNDPPKRPRHPEKVHRPDTPVLSKPDWIRVKAPVSPG
                     YVATRDIVRAHGLHTVCEEAGCPNIGECWDKKHATFMIMGDTCTRACTFCNVATGLPG
                     ALDPQEPAHVAEATAKLGLTHVVVTSVDRDDLVDGGAAHFAAVIRTVRARCIATTIEV
                     LTPDFLRKDGAAETVVAARPDVFNHNLETVPSLYLTVRPGARYFASIRLLQKVKELDP
                     QLFTKSGIMVGLGETRNEVLQVMDDLRAADVDFLTIGQYLQPTRKHHAVARFVTPDEF
                     KAYETIAYAKGFLTVSASPLTRSSHHAGEDFVRLQAARAHRVTHSPLSPTLGGG"
BASE COUNT          810 a         1095 c         1104 g          755 t
ORIGIN      
        1 gtcggccacg tttttgcccg atattcacag cgtcgatgcg cgacgacgcg gagcgcgaga
       61 aggaacttct atctatccct gctgccggca caaatttcca tttctggttg tcgcggcgcg
      121 ggaatttttt ttgcggccgc cacacaatcg tcgtagctcc atcgcaattt ccggcaatgc
      181 gtactacctg cgaatgcagt tactacctgc gatcgagccg cgtcatgttt gcttacgact
      241 gcagcgttac tatcggacag gcaagccata cgagtagctt tgtcgcgcat caacaaacat
      301 cttgcacgtt tcggtcatga aggcaggtgc cgactagtcg gccggagttg ccggaccgca
      361 aaaaaagggg ggttatggca atgttgcgac acgtagttgc tcgtcgtgcc ggcgggagca
      421 tctcaggaat atcactcggt ctattcggcg ctgcagccgt tgcgctgcta gcctcctccg
      481 atcctgtcgg cgcggtgtca gaattcggca cgcgggatga agccgtcgcg atggttcacc
      541 gcgtgcagga catgtacaag aagctcggtc ttgaggctac gactcaagcg atcaggcgta
      601 aggcgccagg aactatcgac cgcgatcttt acgcctatat cattgatttt aacggtctcg
      661 tggtcgccaa cggcgcgatt cccacgatga cacccggcac taatctcatc aattttcgag
      721 atcaaaacgg aaaatatgtg atgcgggcag agttggagat ctgcaagggc ccgcaacagc
      781 gcggctgggt cgatttcaga tggctcaatc ccgccaccca aagtatcgac gacaagtccg
      841 cctatcttga gcggttgggg acggaatcga tgtgcgtcgg cgtcggcatc taccgaaacg
      901 agcagatcaa tgagaatacg gttgccatca tctccggtag tcccagcgcc gatgacacct
      961 atctgcaggt ggccaatgat ctggcctcca tcctcaacga ctccgaccgc ctgaggattc
     1021 ttccgattgt cggcatcggc gggcatcaaa acatccgcga cgtgcgctac ttaaagggcg
     1081 tggacatcgg tcttacccaa ttgagcgttc tcaacagctt tcgcaactcc aaccagacgc
     1141 tcggcaagta tgacgacaaa atcgtttata ttggcaagct cttcaacgaa gaggtgcatc
     1201 tgattgctcg atcggaaatt acctcgatcg agcaactcaa tgggcgcaaa gtaaatatcg
     1261 acgaggagcg cagcggcacg actcagacga tgcgcgatgt gttcaagcgc ttggggatta
     1321 aggttgaaga ggtcaatgtc acccaagggc aggctttcga gaagctcaag agcggtgaga
     1381 tcgtggccac cgcttacgtc gccgggaagg cagccaaatt gatctcaaat ctgaagtttg
     1441 agcgtggaat gcacttcctc caggttccgt attcgtcgga gatcgcggcg gagtacctgc
     1501 cgaccgatct cacccacgat gattacccgg acctgatccc cgccgggcag acgatccaaa
     1561 ccattgccga cgaggtgatt ttgatcgggt ataattggcc gaaaaacacc gatcgttatc
     1621 ggcgcgttca aaggtttgtt gaggcgtttt tcccaaagat cgaagaattt tggaaggcgc
     1681 cgaaccatcc caaatggcga gaggtcaatc ttgccgttac tgtaaaaggc tggaagcgct
     1741 ttgagcctgc ggacgagtgg ctcgctgcgc accgcaaccc ggaggtcgcg gcgaacgtgc
     1801 aacagacgaa tttgcaatcg tcagcgccat ctcagggtgg caccagcgct gtgcgcggat
     1861 tgcttccgaa cccatcctcc gccgacgcac aactgtatca agaatttctg aaatggaagc
     1921 aatcgcaacc aaatcgctaa aaagcaagat tctaggttga ccctgctctg gcattgcccg
     1981 gcttgcagct gagcaatgcc aagggagtgg gggtgatgag cgctttagcg cggctcgggg
     2041 gcgcgcgacg gcccgttcaa accattcgta cgggcccgaa tacggcgtcg gcgcgatgtt
     2101 caaaagccga cgcgaagcga cggaaggcgg catcaaacat cgcccccatt agcagcccca
     2161 gggtacggct gcgaaattca taggagatga aaaactcgat ctcgcacgcg gcttcagcgg
     2221 cgcctgctgc tgcgccggcg cgattgtcga gcgggcgaaa cacccagcgg ttctccatgc
     2281 ggctgaacgg accgtcgaga tattcaacca ggattgtttg gcgctcgcgg tcgagtgtca
     2341 ctcggctagt gaaagtttcc tggatcagct tgtaggcgac cgtcatctcg gcaacgacaa
     2401 cctcgcgatc ccctaattgc gtgcgtcgtc gcacctgcat ggcgcggcac agcggcacga
     2461 attccggata gcgctcaatg tcggccacga ggtcgaacat gtcggcggcg gcgtgcccta
     2521 cacggcggcg tgttgaaaat tgcggcatca gcgtcgttcg gtcgctgtca tggagcccct
     2581 ctccctaccc tccccccaga gttggggaga gtggagagtg ggtgacgcga tgcgcccggg
     2641 cggcttgcag ccgcacgaaa tcctcgccag catgatggga agagcgtgtc aacggcgacg
     2701 ccgacactgt gaggaagcct ttcgcatagg cgatggtctc atatgctttg aactcgtcag
     2761 gcgtcacaaa acgcgcgacc gcatggtgct tccgggttgg ctgcagatac tgtccgattg
     2821 taaggaaatc cacgtccgca gcgcgcagat cgtccatcac ttgcagcact tcgttgcgcg
     2881 tctcaccgag ccctaccatg atgccggact tggtgaagag ctgcggatcg agttccttca
     2941 ccttctgcaa aagccggatc gaagcgaaat agcgcgcacc gggccgcacc gtcaggtaca
     3001 gcgacggcac ggtttcaaga ttgtggttga acacatcggg ccgcgcggcc acgaccgttt
     3061 cggcagcgcc gtctttgcgc agaaaatccg gcgtcagcac ctcgatggtt gtggcgatgc
     3121 agcgcgcccg cacggtgcgg atgaccgccg caaaatgagc cgcaccgcca tcgacaagat
     3181 cgtcgcggtc gaccgacgtc accacgacat gcgtcagtcc gagctttgcg gtcgcctccg
     3241 ccacatgggc gggttcctgc ggatcgagcg cgcccggcag gccggtcgcc acattgcaga
     3301 acgtgcaggc gcgtgtgcag gtatcgccca tgatcatgaa ggtggcgtgc ttcttgtccc
     3361 agcactcgcc gatattggga cagccggcct cctcgcacac cgtgtgtagc ccatgcgccc
     3421 gcacaatgtc gcgggtggcc acataaccgg gcgaaaccgg tgccttaacc ctgatccaat
     3481 cgggcttgct caataccggc gtatcgggcc gatgcacctt ttcgggatgg cgcggccgtt
     3541 tgggcggatc attgacggtg tcaagcacaa cgaccatggc taaacctcac gattgattac
     3601 ttacgcacgt gtcgcgcgca tcgcaaggac aagggtcggg caatcatcgc cgaatgggct
     3661 gcagcccgga tggacccgcg tctttcgcgg gtccatccgg gaacaccccg cttgccggca
     3721 tctcagctat tggtaagcag gccccggatg tgccctctta cgga
//
LOCUS       DATILV010000650         6395 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2199186, whole genome shotgun sequence.
ACCESSION   DATILV010000650 DATILV010000000
VERSION     DATILV010000650.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6395)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6395)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6395
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2199186"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..321)
                     /locus_tag="VLJ17_15420"
     CDS             complement(<1..321)
                     /locus_tag="VLJ17_15420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV24405.1"
                     /translation="MAQVVLKDLNKKFDEVHAVKDLNLQVRDKEFIVLVGPSGCGKST
                     TLRMVAGLEDITSGEIYIGDQLVNDLPPKKRDIAIVFQNYALYPHMTVYDNMAFGLKM
                     RKFPK"
     gene            complement(695..1072)
                     /locus_tag="VLJ17_15425"
     CDS             complement(695..1072)
                     /locus_tag="VLJ17_15425"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HSV24406.1"
                     /translation="MTMRLQTIAAAATFLLAAGFAQAQGDPKRGEKAFEACRACHAAD
                     GEANEVGPGLRGVFGRHAGERDDFRYSPALKRSGITWTAQTLDIFIADPQKMVPGNRM
                     PYDGLPDARARSDLIMYMLQVFK"
     gene            complement(1069..2844)
                     /locus_tag="VLJ17_15430"
     CDS             complement(1069..2844)
                     /locus_tag="VLJ17_15430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009859341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HSV24407.1"
                     /translation="MATKMKEVDVVIVGLGWTGGILAKELTEAGLKVVALERGGMRST
                     ANDYSVPQVRDELRYVQRHDLMQNTAKDTLTIRNNPSQEALPMRRLGSFLPGEAVGGS
                     GVHWSGHTWRWTDMEFKVRSLYEKRYGKDYIPADMTIQDWGITYAELEPYYDKFEYVA
                     GVSGKAGNIRGQIQPGGNPFEAPRAREYPLPPLTTILASQMFSEAAKNQGYHPFPRPS
                     ANASRAYTNPDGARFGACQYCGFCQRFGCEANAKGSPHITVIPIALRNPNFELRTHAW
                     VTKVLKDSSGKRVTGVTYTNVLNGEEFEQPAAVVLLCAYAINNVHLMLLSGIGQPYDP
                     VSQQGVIGKNYCYQTGAGANLFFEGRNFNPFISAGGTNATIDDFNLNWDFDRGKYGFV
                     GGYSIGAGFNSALPIGYRPVPSGTPSWGKAWKAATAKWYQTAMNIGSSGSVMANRYNY
                     YDLDPTYRNAFGLPLMRMTFDYKENEHKMGRHAAQLVNDIAKSMNPTTFNPATARTEP
                     WTVVPYQSTHNTGGTIMGTNPKNSAVNKYLQSWDCHNLFLIGANVFVHNAANNPTGPV
                     GALAYWTADAIRNRYMKNPGPLVPA"
     gene            complement(2858..3595)
                     /locus_tag="VLJ17_15435"
     CDS             complement(2858..3595)
                     /locus_tag="VLJ17_15435"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HSV24408.1"
                     /translation="MKNDVFDRRTFLKGAVTGTAAAVIGALPQPVPAQQDAPAPVQQN
                     APAPAQSLTSAAYAYLNLAEQVFVEALVDHMVPADLLSPKGTDLGINIYIDRTLAGGW
                     GKGERLYMQGPWKLGVPSQGYQLPLTPAELYRAGIAAANAFCVKTYGKSFDKITESQR
                     EEFLLGLQAGKVTFENGPPADVFFTTMYQSVMEGMFSDPIYGGNRNKAGWKIIGFPGV
                     IAVHYQNVEKFRDKKYTADPVSIADMS"
     gene            complement(3740..5902)
                     /locus_tag="VLJ17_15440"
     CDS             complement(3740..5902)
                     /locus_tag="VLJ17_15440"
                     /inference="COORDINATES: protein motif:HMM:NF040438.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase domain-containing protein"
                     /protein_id="HSV24409.1"
                     /translation="MSERIFEYIRKSLTTTVAVVTGILVCAASLQARITKIVIDEKIS
                     PAFCKGATCASFGDAGQYEQISGRAFGELDPRDPLNKLIQDVELGKDADDKVRYVTTF
                     VLTKPVDMTKTSGLMWHDVPNRGRPLTISNMERGFGDVGLASAWQGDNAGMSAELGTA
                     VRATMTVGANHWLHVPVAKNPDGSPITGPVLGRIINRSGPAAQPLIVQTNPLPYMPVS
                     LDTSKATLVSRDHETMEGVVTGETPIASADWKFCGGGAFDKPLPLTKLPVQICLKGGF
                     NPAKLYQVVYTAKDPYILGIGFAAWRDVASFFKYADKDDAGTTNPLAGRITKSITRGR
                     SQSGNYLRGWLHLGFNQDEGKRQVHDGMWPIIAGRRIALNFRWAQPDGVTELYQPSSE
                     GPQWWVPYSDRTRGLPTRSVLDRCTATKTCPKVIEHFGAAEIWALRLGPEWVGTDPKE
                     DIPLPDNVRRYYIASTAHGGGVGGFDTSLPGVGLPTKPLECPGNNFGTGVLPANPMPH
                     TETVNALTVHLRNWVMHNTPPPDSRYPTLRERQLVEPIKTAMDFPTIPGLRPTAPEPG
                     FINAVLDYDWGPSFDPNDGSGVPSNTPPRIKQVLKMLVPRVDADGNEIGGVPVVLRDA
                     PLGNYLGWNITAGGERPFHKDQLCAYAGGMIPFAKTKAERMASSDPRPSLEERYTDHA
                     GYVAAVRKAAANAVAQKFLLQKDADALIAAADASNVLK"
     gene            complement(6053..>6395)
                     /locus_tag="VLJ17_15445"
     CDS             complement(6053..>6395)
                     /locus_tag="VLJ17_15445"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSV24410.1"
                     /translation="RIYAQKCLACHGENGKGGISAGLVGGAPITGVDSQKTIANFWPY
                     ATTVFDYIRRAMPWQQPRSLTNEEVYALTAYILALNKLISENDTMNAQTLPKVKMPNR
                     DGFIIRFPDKL"
BASE COUNT         1153 a         1914 c         1929 g         1399 t
ORIGIN      
        1 cttggggaac ttccgcatct tgagcccgaa ggccatattg tcgtagacgg tcatgtgcgg
       61 atagagggcg tagttctgga agacaatggc gatgtcgcgt ttcttgggcg ggaggtcgtt
      121 gacgagctgg tcaccgatgt atatctcacc cgaggtgata tcctccaggc cggccaccat
      181 ccgcagcgtc gtggacttgc cgcagcccga gggtccgacg aggacgatga actccttgtc
      241 gcggacctgg aggtttagat cctttacagc gtggacctcg tcgaacttct tgttcaggtc
      301 cttcagcacc acctgtgcca tcacgtcctg tcctctattc tctttgacgg agaatgataa
      361 gaatctcttt taagtggggg gtaatagtgg tgtcaggatt cattttatta attttattgc
      421 tttggctttg tgtcaatgcc tggcggcttt tcccttcctc cgccccgtaa ccgagcttta
      481 aacgggaaag taaacgcaac catcgagatc ttccgaaatt atgggcctat gcgctggtac
      541 cccacaatcg ttcgccttat ggaaaaacgg gtcaagtccg gagttgaatg gttaactcca
      601 gcttttaacc tatgtcacga ttccactaca aataaagatc taaacaactg cagtcttgac
      661 cctaaacacg aagcaaggcg ccggggcgcg acagctactt gaatacctgc agcatgtaca
      721 tgatgaggtc ggatcgggcg cgcgcgtcgg gcaggccgtc gtagggcatg cgattccccg
      781 gcaccatctt ttgtggatcg gcaatgaaaa tatccagcgt ctgggccgtc caggtgatgc
      841 cactacgctt gagcgccgga gagtagcgaa aatcatcacg ctcgcccgca tgtcgcccga
      901 aaacgccgcg gagaccgggc cccacttcgt tggcttcacc atcggccgcg tgacaggcgc
      961 ggcaggcctc aaaggctttc tcgccgcgtt tgggatcgcc ttgcgcctgc gcaaagccgg
     1021 ctgctaagag aaacgtcgcc gccgctgcga tagtctggag acgcattgtc atgcgggcac
     1081 caacggtcct ggatttttca tatagcgatt cctgatcgcg tcagctgtcc agtaggcgag
     1141 cgcgcccacc ggcccggtag ggttgttcgc cgcgttgtgg acaaacacgt tggcgccgat
     1201 gaggaacaag ttgtggcaat cccagctttg cagatacttg tttacagcac tgtttttcgg
     1261 gttggtgccc atgatcgttc ctccagtgtt gtgcgtgctt tggtaaggta cgaccgtcca
     1321 gggctcagtg cgggctgtgg cggggttgaa cgtcgtcggg ttcatggact tggcgatgtc
     1381 gttcaccagt tgtgcagcgt gccgccccat cttgtgctcg ttctccttgt agtcgaacgt
     1441 catgcgcatc agcggcaatc caaacgcgtt gcgataggtc gggtcgagat catagtagtt
     1501 gtagcgattc gccatgacgc tgccgctcga gccgatgttc atcgcggttt gataccactt
     1561 tgccgttgcc gctttccatg cttttcccca cgacggcgtg ccgctgggca ccggccggta
     1621 cccgatgggg agagcgctat tgaaaccggc cccgatactg tatccgccga cgaaaccgta
     1681 cttgccgcga tcaaaatccc agtttaagtt gaagtcatcg atggtggcgt tcgtcccgcc
     1741 ggcggaaatg aacgggttga agttcctgcc ttcgaagaag aggttcgcgc cggcgccagt
     1801 ctggtagcag tagttcttgc cgatcacgcc ttgctggctc accgggtcgt acggctggcc
     1861 tatacctgaa agcagcatca ggtgcacgtt gttaatggca taagcgcaca gcagcaccac
     1921 cgccgccggc tgctcgaatt cctcgccgtt cagcacgttc gtataggtca cgccggtgac
     1981 gcgcttgccg ctcgagtctt tcagcacctt cgtcacccac gcatgggtgc gcagctcgaa
     2041 gttcggattg cgcagcgcaa tcggaataac agtgatgtgc gggcttcctt tcgcgttcgc
     2101 ctcgcagccg aagcgttggc agaagccgca atactggcat gcgccgaacc gcgccccgtc
     2161 aggattcgta taagcgcggg acgcgttcgc gctcgggcgc gggaacgggt ggtagccctg
     2221 gtttttcgcg gcctcgctga acatctggct cgccaggatc gttgtgaggg gtggcagcgg
     2281 atactcgcgg gcgcgcggcg cttcgaacgg gttgcccccc ggttgtatct ggccgcgaat
     2341 gtttcccgct ttgcctgaaa cccccgccac gtactcgaac ttgtcgtaat agggctcgag
     2401 ctcggcgtag gtgatgcccc agtcctgaat cgtcatgtcg gcggggatat agtccttgcc
     2461 gtagcgcttc tcgtagaggc tgcgcacctt gaactccatg tcggtccagc gccacgtgtg
     2521 tccgctccag tgcacacccg agccgccgac ggcctcgccg ggcaaaaacg aaccgagccg
     2581 ccgcatcggc aacgcttctt gcgaaggatt gttgcggatc gtcagcgtgt ctttcgcggt
     2641 gttttgcatg agatcgtggc gctgcacgta acgaagctcg tcgcggactt gcggcaccga
     2701 ataatcgttg gcggtgctgc gcattccgcc gcgctccagc gcgacgactt tcaacccggc
     2761 ctcagtcaat tccttcgcga gtatgccgcc cgtccagccc aggccgacga tgacgacatc
     2821 gacttccttc attttggtgg ccatgtcatc ctccagttca gctcatgtcc gcgatgctga
     2881 cgggatcggc ggtgtatttc ttgtcgcgaa acttctcgac gttctgataa tgcacggcga
     2941 tcactccggg gaagccgatg atcttccagc ccgccttgtt ccggttgccg ccgtagatcg
     3001 ggtcggagaa cataccttcc atgacggact gatacatcgt ggtgaagaaa acgtcggcgg
     3061 gcggtccgtt ttcgaacgtc accttgccgg cctgaagacc caggagaaat tcctcgcgct
     3121 ggctctcggt gatcttgtcg aaactcttgc cgtaggtctt gacgcagaac gcattggcag
     3181 ccgcaatgcc cgcgcgatac aactccgcgg gcgtgagcgg aagctgatag ccctggctcg
     3241 gcacgcccag cttccacggg ccctgcatgt agaggcgctc ccctttgccc caaccgccgg
     3301 caagcgtgcg gtcgatgtag atgttgatgc cgaggtcagt gcctttgggc gataacaggt
     3361 cggccggcac catgtggtcg acgagggcct cgacgaaaac ctgctctgcc agattgagat
     3421 aggcgtaggc cgcgctcgtg agcgactgcg ccggagcggg cgcattttgc tgaaccggcg
     3481 ccggtgcgtc ttgctgcgct ggaacgggct ggggcagcgc gccaatcacc gccgcagctg
     3541 tgcctgtcac ggcgcctttc agaaaagttc gacgatcgaa cacatcgttc ttcatcgttc
     3601 ctccctttgt tgagcggcgc ggcggcgccg ttgcaaccga accccaaatt gcgcatttgc
     3661 cggcgaccgt atcagccctc gagcaacgct tgcaagctct taattaaagc gaacccccat
     3721 gcggctttct agctgacgcc tacttcaaaa cattactcgc atccgccgcg gcgatcagcg
     3781 catcggcatc cttctgcagc aggaacttct gcgccacggc gttggccgcg gcttttctga
     3841 ctgccgcgac gtaacccgcg tgatcggtat aacgctcttc cagtgacgga cgcgggtcgc
     3901 tgctggccat gcgctcggct ttggtttttg caaacgggat catgccgccg gcgtacgcac
     3961 agagctggtc cttgtggaac ggacgttcgc cgccggcggt gatgttccac ccgaggtagt
     4021 tgccgagcgg ggcatcgcgc agcacgacgg gcacgccgcc gatctcgttg ccgtcggcgt
     4081 cgaccctggg caccagcatt ttgagcacct gcttgatgcg cggcggtgtg ttgcttggca
     4141 cgcccgatcc gtcgttggga tcgaaactgg ggccccagtc gtaatccagc accgcattga
     4201 tgaatcccgg ttccggcgcg gtcggccgca agcccggtat cgtcggaaag tccatcgctg
     4261 tcttgatcgg ttccacgagc tgacgctcgc gcagcgtcgg atagcggctg tcgggcggcg
     4321 gcgtgttgtg catgacccag ttgcgcaaat gcaccgtcaa cgcattgacc gtctcggtgt
     4381 gcggcatcgg attggcgggg agcacaccgg tgccgaagtt gttgccggga cattcgagcg
     4441 gtttggtggg cagaccgacg ccgggcaggc tggtgtcgaa gccgcccacg ccgccaccgt
     4501 gcgctgtact cgcgatgtaa tagcggcgca cattgtcggg cagcgggatg tcttccttgg
     4561 gatccgtgcc cacccattcc ggacccagcc tcagcgccca gatttcggcg gcgccgaaat
     4621 gctcgatgac tttggggcag gtcttggtgg cggtacagcg gtcgagtacg ctacgcgtcg
     4681 gcaggccgcg cgtccgatcg gagtacggca cccaccactg cggcccctcg ctgctgggct
     4741 ggtagagctc cgtcacgccg tcgggctgcg cccagcggaa gttgagcgcg atgcggcggc
     4801 ccgcaatgat gggccacatg ccgtcgtgca cctggcgctt cccttcatcc tgattgaaac
     4861 cgagatgcag ccagccgcgc aggtaattgc cggattgcga gcggccgcgc gtgatgctct
     4921 tcgtgatgcg acccgcgagc gggttcgtgg tgccggcatc gtccttgtcc gcatatttga
     4981 agaacgaagc gacatcgcgc cacgcggcga aaccgatgcc gaggatgtac ggatctttcg
     5041 cggtgtacac cacttgatag agcttggccg gattgaagcc gcctttcaaa caaatctgca
     5101 ccggcaattt ggtcagcggc aacggcttat caaacgcgcc gccgccgcag aatttccagt
     5161 cggcgctcgc gatcggcgtc tcaccggtaa cgacaccctc catcgtttcg tgatcgcgcg
     5221 agacaagcgt tgctttcgac gtatcgaggc tcaccggcat atagggcagg ggattggtct
     5281 gcacgattaa cggctgcgcg gcagggcccg agcggttgat gatcctgccg aggacggggc
     5341 ccgtaatcgg cgagccatcc ggattttttg cgactggcac gtgcaaccag tgattggcgc
     5401 ccaccgtcat cgtcgcgcgc acggcggtac cgagttcggc gctcatcccg gcgttgtcgc
     5461 cttgccacgc gctcgccaaa ccaacgtcac cgaagccgcg ctccatgttg ctgatggtga
     5521 gcggtctgcc gcgattgggc acgtcgtgcc acatcaggcc gctcgttttc gtcatgtcca
     5581 ccggcttggt caggacgaac gtggtgacgt agcggacctt gtcatctgcg tctttgccga
     5641 gttcgacgtc ctgtatgagt ttgttgagcg gatcgcgcgg atcgagttcg ccgaatgcgc
     5701 ggcccgagat ctgctcgtat tgcccggcgt cgccgaaaga agcgcacgtc gcgcctttgc
     5761 aaaaagccgg cgagatcttt tcgtcaatga cgattttggt gatgcgcgcc tgcaacgatg
     5821 cagcacaaac cagaatcccc gtaacgactg caaccgtggt cgttaacgat ttccgtatgt
     5881 attcaaatat cctttccgac attacagcct ccccaggcag tggagcccaa gaagataggt
     5941 gtcactagaa atcgggggca gacaactatt tcaggccttt ctgatcaccg ccgataagaa
     6001 tgtactctga gcccaagcgg cattcgtcac tcgtcacctc gtcattgtct ctctacagtt
     6061 tgtccggaaa gcggataatg aatccgtccc ggttcggcat ctttaccttc ggcagcgtct
     6121 gggcgttcat cgtgtcgttc tcgctgatca gcttgttgag cgcgagaatg taggcggtca
     6181 aagcgtagac ttcctcgttg gtgagcgacc ttggttgctg ccacggcatc gcgcggcgga
     6241 tgtagtcgaa gacagtcgtc gcatagggcc agaaattagc gatggtcttc tgcgagtcta
     6301 cgccggtgat cggagcaccg cccaccaggc cggcgctgat gccgcctttg ccgttctcgc
     6361 cgtggcatgc aagacacttc tgtgcgtaaa tacgc
//
LOCUS       DATILV010000651         3654 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_152844, whole genome shotgun sequence.
ACCESSION   DATILV010000651 DATILV010000000
VERSION     DATILV010000651.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3654)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3654)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3654
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152844"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1674)
                     /locus_tag="VLJ17_15450"
     CDS             complement(<1..1674)
                     /locus_tag="VLJ17_15450"
                     /inference="COORDINATES: protein motif:HMM:NF012579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HSV24411.1"
                     /translation="MIQLTPQNIRIGARAGSKNEAIRAAGQVLVESGFIEPGYIESMI
                     GREGQANTYLGNGISIPHGMAKDRELIRATGISVVQLPEGVEWGPGKVAHLIVGIAAK
                     SDEHLGVLAALTDVLDDPAKAELLAKTNDPNDIIAGLSREAAQPTPEPEGAPPPPGAH
                     HVDAKIVGSAGMHARPATVFADLAGQFESDIRVQYGTKIANGKSMAAILKLGTPGGQT
                     IRIIACGPDAEPALKALKEAVDSGLGDVEETREAITEADKWVPVSGGHALTGVSASPG
                     IAIGPVYQFQTTHILVEDKPQDPESEKLALKRAIAAANEQITDIYDQVSKQSGKGQAA
                     IFRAHLALLNDAEIFQEVSTHVETGHSAAWGWHHAIERRSMELKQIENERLAERAADL
                     HDIGQRVLRLLAGAEHGAPRLPDHAVILVADDLTPSDTAQLDPKRILGLCTASGGPTA
                     HTAIIARSLDIPCVVGAGAAVLEVDSERTCILDGSAGKLYIEPNAEDVESAKRFQVDL
                     ASRRNEEYATRYEPAVFTDGHRVEVVGNIGKAAEATAAVEAGAEGIGLMR"
     gene            complement(1716..3524)
                     /locus_tag="VLJ17_15455"
     CDS             complement(1716..3524)
                     /locus_tag="VLJ17_15455"
                     /EC_number="2.7.1.202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017486897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022877 -
                     protein-N(PI)-phosphohistidine-fructose phosphotransferase
                     system transporter activity [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose-like transporter subunit IIB"
                     /protein_id="HSV24412.1"
                     /translation="MKKIIAVTSCPTGIAHTLMAAEALRKVATSMGHQIKVETQGSAG
                     KKGVFTEEDVADADVVILATDIRIEPARFAGKPILETSTSEAIRNTREVLGSALALLP
                     PEPAAEVPAAAAPEAAAATAAAAPAATGGGLKRFVGITSCPTGIAHTFMAAAALEKAA
                     KALGHTIKVETQGSVGAKNQLTPEDIAAADAVVIAAETNVDTSRFGGKRLYMTSTKEA
                     MHAGRDVLKKALEQPVEGAGGGAGADLAGAVEKAKAERAKARTGPYKHLMTGVSYMLP
                     LVVAGGLAIALAFAIGGIQEGAYPEGTLPAALMKIGGDTAFRLFIAVFSGFIAYSIAD
                     RPGIAPGLVGGFLAQSLGAGFIGGIFSGFLAGYFTKFLADKIRLPATLEGLKPVLILP
                     FLSTLGIGLLMIYLIAPPVKWLNDAMNAWLLGMQGANAVVLGIILGAMMAFDMGGPIN
                     KAAYAFAVGLLASKIYAPMAAVMAAGMTPPLGLALACLLFKNKFDLEEREAAGPALVL
                     GISFITEGAIPFAAKDPIRVIPALIAGSAVTGAISMVSNVQLLVPHGGIFAALIPGAV
                     TNLLAYAIAILAGTVVTAGVLFFLKRPITEPMPALA"
BASE COUNT          722 a         1080 c         1120 g          732 t
ORIGIN      
        1 tcgcatcaac ccgatgcctt cggcgccggc ctccactgcg gcagttgctt cggcagcctt
       61 tccaatattg ccgacaactt cgacgcgatg cccatcagtg aagaccgccg gttcgtaacg
      121 cgtcgcatac tcttcatttc ggcgactcgc gagatcgacc tggaagcgct tggcggattc
      181 cacgtcttcg gcgttcggct cgatgtagag tttgccagcg gaaccatcca ggatacatgt
      241 ccgctcggag tctacttcga gaactgcagc accagcgccg acgacacagg gaatatcgag
      301 cgatcgcgca ataatagcgg tgtgcgcggt gggcccaccg gaggccgtac aaaggccaag
      361 aatccgcttg ggatcgagtt gcgcggtgtc cgagggtgtc aagtcatcgg cgacaagaat
      421 gacagcatga tcaggcaatc gtggcgcacc atgctcagct ccagcgagca gacgcaagac
      481 gcgctggccg atatcgtgga ggtccgcagc tcgctcggca agccgctcgt tctcaatttg
      541 cttcaactcc atcgaacgac gttcaatggc atggtgccac ccccaggccg cactgtggcc
      601 ggtttcaaca tgcgtggaga cctcttggaa aatttccgcg tcgttgagga gcgccaagtg
      661 tgctcggaaa atcgcggcct gacctttgcc cgactgtttt gagacttggt catagatgtc
      721 cgtgatctgc tcgtttgcgg cagcgatggc gcgcttgaga gcaagctttt cggattcggg
      781 gtcctggggt ttgtcctcga cgaggatgtg agtcgtctgg aactgataca cgggaccgat
      841 cgcaatcccc ggcgaagccg agacgccggt tagagcatgg ccgccggaga cggggaccca
      901 tttgtcggcc tctgtaatcg cctctctggt ctcctcgacg tcgccaagtc cactgtcaac
      961 agcctctttg agcgccttca aggcgggttc ggcgtccgga ccgcaagcaa tgatgcggat
     1021 cgtctgcccg ccgggagtgc cgagcttaag aatggccgcc atggattttc cgttcgcgat
     1081 cttggtgcca tattgcacgc ggatatccga ctcgaactgg ccggcaagat cggcgaaaac
     1141 agtcgccggt cgtgcatgca ttcctgcgct gcccacgatc ttggcatcga cgtggtgcgc
     1201 tccgggcggt ggcggagctc cctccggctc gggggtgggc tgcgccgctt cgcggctcaa
     1261 gcctgcaatg atgtcgttgg ggtcattcgt tttcgccagg agttcggctt tggcggggtc
     1321 atccagcacg tccgtcagcg ccgcgagcac gcctaagtgc tcgtcagatt tggcagcgat
     1381 ccccacgatg agatgagcga cttttcctgg tccccactct accccttcag gtaactggac
     1441 gacggagatg ccggtggccc ggatcagctc gcgatccttg gccatgccat ggggaatgga
     1501 aatcccattg cccagatacg tgttggcctg gccttcccgg ccgatcatgc tttcgatata
     1561 gccgggttcg atgaagcccg attcgacaag gacctgacct gccgcgcgaa tggcttcgtt
     1621 cttgcttccg gcgcgagcac cgatcctgat gttttgaggc gtgagttgaa tcatgcgtcg
     1681 agttctctag tggaggttcg tttcgatcgt tgtgatcagg ccagggcggg catcggctcg
     1741 gtgatcggac gcttgaggaa gaaaagcact ccggctgtga ccaccgtgcc cgcgaggatg
     1801 gcaatcgcgt aggccaagag attggtcacc gcgccaggga tcaatgcggc gaaaattccg
     1861 ccgtgcggaa cgagcagctg cacgttgctc accattgaga tagccccggt gacggcagaa
     1921 cccgcaatta gcgctgggat gaccctaatc gggtccttgg cagcaaacgg aatcgcgcct
     1981 tcggtgatga aagagatccc caggaccaac gccggaccag cggcctcgcg ttcctcgagg
     2041 tcgaacttgt ttttaaacag gaggcacgct agcgccagcc ccagaggcgg cgtcattccg
     2101 gccgccatta ctgccgccat cggcgcatag atcttgctcg cgagaagccc gacggcgaaa
     2161 gcgtaggccg ccttattgat gggtccgccc atgtcgaacg ccatcatcgc ccccagaatg
     2221 atgccgagaa cgacagcgtt ggcgccttgc atgccgagca gccacgcatt catcgcatcg
     2281 ttgagccatt tgaccggcgg agcgatcaaa tagatcatca agaggccgat tccgagggtt
     2341 gagaggaacg gcaaaatcag caccggcttc agtccttcaa gggttgcggg caggcgaatc
     2401 ttatctgcga gaaatttcgt aaaatagccc gcgagaaagc cggaaaaaat tccaccgatg
     2461 aagccggcgc ccagagactg ggccagaaac ccaccgacca atccgggggc gatgccgggt
     2521 cggtccgcta ttgaataggc gatgaagcct gaaaataccg cgatgaagag gcgaaaggcg
     2581 gtatcgccgc cgattttcat gagcgccgcg ggaagcgttc cttccggata tgcgccttct
     2641 tggatgccgc caatcgcgaa ggccagggcg atcgccaaac cgccagcaac gaccaacggg
     2701 agcatataag agacgccggt catcaaatgc ttatacgggc ccgtccgcgc cttggctcgc
     2761 tccgccttgg ctttttccac cgctccggca aggtcggcgc ctgccccgcc acccgcaccc
     2821 tccaccggct gctcgagggc tttcttaaga acgtctcggc cggcgtgcat cgcctctttg
     2881 gtgctcgtca tgtagaggcg cttgccgcca aagcgtgagg tgtcgacatt ggtctcggcg
     2941 gcgatgacca ctgcgtctgc ggcagcgatg tcctcaggcg tcagttggtt cttggcccct
     3001 accgaaccct gagtctccac cttgatggtg tgacccaaag ctttggcggc cttctcgagg
     3061 gcggccgcgg ccatgaaagt atgcgcaatt ccggtcggac aagaggtgat gccgacgaat
     3121 cgtttcagac caccaccagt agcagcagga gcggcagcag cagtggcggc ggctgcttca
     3181 ggagcagcgg ctgcgggcac ttcagcggcg ggctccggcg gcagcaatgc taaggccgac
     3241 ccgagaactt cgcgggtgtt gcggatggcc tcactggtgg acgtctccaa aatcggcttg
     3301 ccggcaaacc gtgccggctc gattcggata tcggtggcta ggatgacgac atcagcatcg
     3361 gcgacatcct cctctgtgaa gactcccttc ttgcccgccg agccctgtgt ctcaaccttg
     3421 atttggtgcc ccatagaagt ggcaaccttt ctgagcgctt ccgccgccat taaggtgtgc
     3481 gctatgccag taggacagga ggtgacagca atgatctttt tcatacggaa cggttcagga
     3541 attatggatt ctggcggctg gacttctgat catgcaaagc gaacggtatt caggggacgc
     3601 ggtgctgaac agagaggaga ggcaatccag agaggtcgcc gccacgtggg taga
//
LOCUS       DATILV010000652         6538 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1177069, whole genome shotgun sequence.
ACCESSION   DATILV010000652 DATILV010000000
VERSION     DATILV010000652.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6538
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1177069"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..253
                     /locus_tag="VLJ17_15460"
     CDS             <1..253
                     /locus_tag="VLJ17_15460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24413.1"
                     /translation="VTMTQKPREAVEYAWETMTKACIWSVNEGFDPQRTQWTIDHDAA
                     AGDMDPTKKPSVDQVFDQEIAAAGVAAAGGRVTIGGCTL"
     gene            343..1644
                     /locus_tag="VLJ17_15465"
     CDS             343..1644
                     /locus_tag="VLJ17_15465"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HSV24414.1"
                     /translation="MNINGFRPPGAVLWEDVRGRLDQNEPFSNMFETPLYRDAVWEQF
                     SKEEYARRHAALRDKMRQHKLDVVIVPGGPSHWSFGGGMTWLTGHWEWHAISSYVVVP
                     LEAAPTLIFSMGGTHAEAVRRHVEPALADVRQSRGGRYAEVMVERIKELGLEKPRVGL
                     VEIDPRHKDYMPVNQYNDLRNGLPGAEIVFTRSFIHELVVIKSEAELDCVRRAGVLCQ
                     HAMEAMVAAAKPGATESDLRAAAGSAILRGGGDIDFLIIGSTPMADPAMFFGNPRPSE
                     RKLRNGDIIIMELAAGYRGYTAQIGSPICVGEPTEMVKKFWHEITLPGYQRIVAEIKP
                     GNPIDNVRIAARFFRQQGVQSRPTQIHGIDIVSATPHVFAERTEAREDDKIFKPGMVT
                     MAEPNPIMADGLFGIFLGHTFIVTRDGHEVVDKFPLELVVA"
     gene            complement(1927..2664)
                     /locus_tag="VLJ17_15470"
     CDS             complement(1927..2664)
                     /locus_tag="VLJ17_15470"
                     /inference="COORDINATES: protein motif:HMM:NF012958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HSV24415.1"
                     /translation="MKQQNAKWMLPVPAMAVFVMFLIQPLQAEVLEKTKKVDGTTVHY
                     KTVLPNGYDPAKAYPAILALGGGPQTMNTVDNILNRNFRAEAEKRGYIVVAPAAPDGQ
                     LFFQEGDRIFPEFLQMLLADYKIQGSKFHIAGPSNGGIAALHVAAANPQYFLSVTAFP
                     GYMWEPSAEKLQAISKMCVFMYVGEHDPYKWHGEMRREAEFLGSKGTVTRYSVEKDEP
                     HRLETLAGANAGRLFDGFEETGKGCSK"
     gene            2944..3978
                     /locus_tag="VLJ17_15475"
     CDS             2944..3978
                     /locus_tag="VLJ17_15475"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV24416.1"
                     /translation="MPTLRAWAAIATTFILGAFASVPAVAQTCAGPQQRKLNVGVAVA
                     PPNVVHTAPYIAKALGFFAKRCIDVNIIQFDGGLAGTSVTAVGQGSAISTLPDSAIAQ
                     GLKAKQIWGLAPRPPQAYVVSADVKTPADLKGRRLSAAGGVGGFNWLVGRETLRLAGL
                     TADDAQFVSQGTAGRLPGFVAGQIDAVALHPEDLHIVQQRKPGAHVLITVSDLWPKYS
                     FNAYGASDALIAKDHDLLRDVIAAMIEANRAIYRDADKVIPIIMEATQKPREAVEFSI
                     GVLTKNCVLSVNTGFVRERTEWTHQNSIDIGDIPPDKKLTFDQIADHKLAEEAVASLG
                     GPVDINGCKD"
     gene            4391..5620
                     /gene="hemA"
                     /locus_tag="VLJ17_15480"
     CDS             4391..5620
                     /gene="hemA"
                     /locus_tag="VLJ17_15480"
                     /EC_number="2.3.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003870 - 5-aminolevulinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006783 - heme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-aminolevulinate synthase"
                     /protein_id="HSV24417.1"
                     /translation="MHYTTFFTDALAQLHSERRYRVFADLERLAGRFPHAIWHAPQGQ
                     REVVVWCSNDYLSMGQHPKVIGAMVETATRVGTGAGGTRNIAGTNHPLVELERELADL
                     HRKEAALVFTSGYVSNETGIATMAKLMPNCLIISDAFNHNSMIEGVRQSRCEKVIFRH
                     SDLGHLEQLLKAAGPSRPKLVVFESLYSMDGDVAPVNAICDLAERYGAMTYCDEVHAV
                     GMYGPRGGGICERDGAMNRVDVIEGTLAKAFGCLGGYITGTAVLIDAVRSYAPGFIFT
                     TALPPPVCAAATAAIRHLKASSWERERHQDRAGRVKAVLAAAGLPLMPSDTHIVPVFV
                     GDPENCKMASDLLLEEHGIYIQPINYPTVPKDTERLRITPSPYHTDALVDQLAEALVD
                     VWERLGLPLKKRAVAAE"
     gene            5724..6266
                     /locus_tag="VLJ17_15485"
                     /pseudo
     CDS             5724..6266
                     /locus_tag="VLJ17_15485"
                     /inference="COORDINATES: protein motif:HMM:NF040570.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            6456..>6538
                     /locus_tag="VLJ17_15490"
     CDS             6456..>6538
                     /locus_tag="VLJ17_15490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006202030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HSV24418.1"
                     /translation="MAKAIHMMLRVVDEARSVDFYQRSFGL"
BASE COUNT         1274 a         1976 c         2019 g         1269 t
ORIGIN      
        1 ggtgacgatg acgcagaaac cgcgtgaagc ggtggagtat gcatgggaaa cgatgaccaa
       61 ggcctgtatc tggtcggtca atgagggctt cgatccgcaa cgtacccagt ggacgatcga
      121 tcacgatgcg gcagcgggcg acatggatcc caccaagaag ccctcggtgg atcaggtgtt
      181 cgaccaagag atcgccgccg ctggcgtcgc ggctgcaggc ggccgggtga cgatcggggg
      241 gtgtacgctg tgaggcatca accggtcact cccccttgtg ggccccttgt gggggagggg
      301 agcaaagagg ccgccgtcta ggagatccag ggaatcactt gcatgaacat caacggtttt
      361 cgtccgcccg gcgcggtgct gtgggaagat gtgcgcggtc ggctcgacca gaatgagccg
      421 ttcagcaaca tgttcgagac gccgctgtat cgcgatgctg tatgggagca attctctaaa
      481 gaagaatatg cgcggcgcca tgcagcgctg cgcgacaaaa tgcgtcagca caagctcgat
      541 gtcgtgatcg tgccgggcgg tccgagccat tggagtttcg gtggtggcat gacgtggctc
      601 accggccact gggaatggca cgcgatctcg tcttacgtgg tggtgccgct cgaagctgcg
      661 ccgacgctga ttttttccat gggcggcacc catgcagagg ccgtgcgccg ccacgtcgag
      721 ccagcccttg cggacgtgcg ccagagccgc ggcggccgct acgcggaggt gatggtcgag
      781 cgcatcaaag agctcggtct ggagaagccg cgggtcggcc tggtcgagat cgatccgcgc
      841 cacaaggact acatgccggt gaaccagtac aacgatctac gtaacggcct gcctggcgcc
      901 gagatcgttt tcacccgtag ctttatccac gaactcgtcg tcatcaaaag cgaagccgag
      961 cttgactgcg tgcggcgcgc cggcgtgctg tgtcagcacg ccatggaggc catggtggcg
     1021 gccgcaaagc ccggcgcgac cgagtctgat ctgcgtgccg ccgccggttc cgctatcctg
     1081 cggggcggcg gcgacatcga tttcctcatc atcggctcga ccccgatggc ggaccccgcg
     1141 atgttcttcg gcaacccgcg cccctccgag cgcaagcttc gcaacggcga catcatcatc
     1201 atggagctcg cggcgggcta tcgtggctac acggcacaaa tcggttcgcc gatctgcgtc
     1261 ggagagccga ccgaaatggt aaagaaattc tggcacgaaa tcacgctgcc cggctaccag
     1321 cgcatcgttg ccgaaatcaa gcctggcaat ccgatcgaca atgtacgtat cgcggcgcgg
     1381 ttctttcgcc agcaaggcgt gcagtcgcgc ccgacgcaaa tccacggcat cgatattgtc
     1441 tccgcaaccc cgcacgtgtt cgccgaacgc acggaggcgc gcgaggacga caagatattc
     1501 aagcccggca tggtgacgat ggcggagcca aacccgatca tggcggacgg cctgttcggg
     1561 attttccttg gccatacctt catcgtgacc cgggatggcc atgaggtggt cgataagttt
     1621 cctttggaac tggttgtggc gtgaggatcg ctggcggcat tgaggcgggc cgaccgtcag
     1681 aggcggcgag ccgtgacggc gacggctgac ccggatggat ggtccggccg tgcggcgcaa
     1741 gaggtttcgt cgatctggct ggcgcagatc attcagatgc ccgctcgccc ccagagttgc
     1801 tttgcctgat cgactcggcg ctcgttcgtt taccagggcg gacgcctacg agacgtgtcc
     1861 gtcaccgagc ccaagcatgg cccgagggtc atcaaacgaa gatcaaaatc gaacgggctg
     1921 tcgcccttac ttgctgcacc ccttcccggt ctcttcgaac ccatcgaaca agcgcccagc
     1981 gttggcgccg gcgagggttt ccaatcggtg cggttcatcc ttctcgacgc tgtaacgtgt
     2041 gaccgtacct ttggagccaa ggaattcggc ttcccttctc atttcgccat gccacttata
     2101 cgggtcgtgt tcgcccacat acatgaacac gcacatcttg gagatcgcct gaagcttctc
     2161 cgcacttggt tcccacatgt atccggggaa agccgtcacg gacaggaagt attgtgggtt
     2221 ggctgccgcc acatgaagcg ccgcgattcc gccgtttgac ggtcccgcga tgtgaaactt
     2281 gctgccctgg attttgtagt cagccagaag catttgcaga aattcaggga agatgcggtc
     2341 accctcctga aagaacaact gaccgtccgg cgccgcagga gcgacaacga tatagccccg
     2401 cttttcagcc tctgcgcgga aattgcgatt gagaatattg tccaccgtgt tcattgtctg
     2461 ggggccacca ccgagcgcca gaatggccgg ataagccttc gctggatcat agccgttggg
     2521 caggaccgtc ttgtaatgaa ccgtggtacc atcgactttt tttgtctttt cgagtacttc
     2581 cgcctggaga ggctggatca ggaacatcac aaagaccgcc atcgcgggaa ccggcagcat
     2641 ccacttcgcg ttctgttgct tcatctggag tctccttccc aatcgagttt ctatggactc
     2701 tatatgagag tgaatgcgcc gtttgacgaa tggaacaaac cgctcggtgc tgcatgaccg
     2761 ttccctaaag ccccgggggg agggggctat ctcgaccata cccgcatggt catctgagac
     2821 ggccaggggt gcggtgcgac caagcgccgt cttaaattcg cccggacatg aatgcgaaca
     2881 tccggtccac gtcactgcga aaaaatgacg acgcaaattc gcaagcaata gggagggcca
     2941 ctgatgccga cgctccgcgc atgggccgca atcgccacca cgtttatcct cggcgcgttc
     3001 gcttctgtgc ccgccgtcgc gcaaacctgc gcggggccgc agcagcgcaa gctcaatgtg
     3061 ggtgtcgcgg tggcaccgcc caatgtggtg cataccgcgc cgtacattgc caaggcgctc
     3121 ggctttttcg ccaagcgctg catcgacgtc aacatcattc agttcgacgg tggccttgcc
     3181 ggaacctcgg tcaccgccgt cgggcaaggc tcggccattt cgacccttcc cgacagtgcg
     3241 atcgcccaag gcctcaaggc caagcaaatc tggggcctcg ccccgcgccc accccaggcg
     3301 tatgtggtca gtgctgacgt caagacgccg gccgacctca agggtaggcg gctatcggct
     3361 gccggtggcg tcggcggctt caactggttg gttggccgag aaacgctgcg tcttgccggt
     3421 ttgaccgccg acgacgcgca gttcgtttcc cagggtaccg ccggacgatt gccaggattc
     3481 gtcgccggcc agatcgacgc cgtcgcgctg catccagagg accttcacat tgtgcagcag
     3541 cgcaagcccg gcgcccacgt cctgatcacg gtatccgacc tgtggcccaa atacagcttc
     3601 aacgcctatg gagcctcgga tgcgctgatt gccaaggatc acgacctgct acgcgatgtg
     3661 atcgccgcga tgatcgaggc caaccgcgcc atttatcggg atgccgacaa ggtcatcccc
     3721 atcattatgg aagcaaccca gaagccacgc gaggcggtcg agttttccat cggggtgctg
     3781 acgaaaaatt gcgtgctgtc ggtcaatacg ggtttcgtgc gcgaacgcac cgagtggacc
     3841 caccaaaaca gcatcgatat cggcgacatc ccgcccgaca agaagctgac cttcgaccag
     3901 atcgccgatc acaagctcgc cgaggaagcc gtcgcctcgc tcggcggacc cgtcgacatc
     3961 aacggatgta aggactgaag gcttctttct ccgcatccct gccgactggc ttctcgccac
     4021 gtaacgattt tttaatgctg tgtatgacac ttgcggctac aacctgtggg agcttccagc
     4081 gaatatttcg cgtagacgtc ttcaagccgg accaagttgg accgcaaatg agggtgcgac
     4141 actgcgctgc gttcgctgtc aatactggcc accatggaac cgcggctgcg ccccgatttc
     4201 gcccgtataa tcggttgtgt cgatgacgag atcaaagcgc tggttcaatc cggcccgtag
     4261 accaaccgaa tgcgataacg gcctcgacaa tcggccggga acctctctaa gtatggaatc
     4321 cttctaagaa aaacgttcac aaggcggaat cggaaagcgc cctgttgctg ggcgggggag
     4381 actcgaagca atgcattaca caacgttttt caccgacgcc ctcgcccagt tgcatagtga
     4441 aaggcgctat cgcgtgtttg ccgacctcga acggctggcg gggcggttcc cgcatgcgat
     4501 atggcacgcc ccacagggcc aacgcgaggt cgtagtctgg tgttccaatg attatctgag
     4561 catgggccag cacccaaagg taatcggcgc catggtggag accgcaaccc gggtgggcac
     4621 cggcgccggc ggcacccgca acatcgccgg taccaaccat cccctggtgg aactggagcg
     4681 cgagcttgcc gatttgcacc gcaaggaggc agcgctcgtt ttcacatccg gctatgtgtc
     4741 gaacgagacc ggcatcgcca ctatggcgaa gctgatgcct aactgtctga tcatttcaga
     4801 cgccttcaac cacaattcca tgatcgaggg cgtacgccag tcgcgctgcg agaaggtaat
     4861 ttttcgccat agcgatctcg gtcatctcga acagctgctg aaggcggcag gcccctcccg
     4921 cccgaaactc gtggtgttcg aaagccttta ttccatggac ggcgacgtcg cgccggtcaa
     4981 cgctatctgc gacctggccg agcgctatgg cgctatgaca tattgcgacg aggtgcatgc
     5041 ggtcggcatg tatggtccgc gcggcggcgg catctgcgag cgggatggcg ccatgaacag
     5101 ggtcgacgtg atagaaggca cgcttgccaa ggcatttggt tgcctcggcg ggtacatcac
     5161 cggcaccgcg gtgctgattg acgcggtgcg ctcctatgcg ccgggcttta tctttacgac
     5221 ggcgctgccg cctcccgtct gcgcggctgc aaccgcagcg atccgccacc tcaaggcatc
     5281 gagttgggag cgtgagcgcc accaggatcg cgccggtcgg gtcaaagccg tactggcggc
     5341 cgcgggttta ccgctgatgc cgagcgacac tcatatcgtt ccggtattcg tcggcgatcc
     5401 ggagaactgc aagatggcga gcgacctgct gcttgaggag cacggcatct acatccagcc
     5461 gatcaattat ccaaccgtcc ccaaggatac cgagcggctg cgcatcacgc cgtcgcctta
     5521 ccataccgac gcgctcgtcg atcaactcgc cgaggctctg gtcgatgtgt gggagcggct
     5581 cggcctgccg ctcaagaagc gggcggttgc agcggaatag agctcgtcgc ttcctggcgc
     5641 attgcacctg cttggtccct gtcgcagggt gacccggttg acgggccgaa agcgtacacg
     5701 gccttactca agcggctgcg tcgcagcagc cgggcgcttc gcgcaacgcc gccaaggcca
     5761 agcggcgatt ggcgcggctt catgctcgca ttgccaacgt ccgcaaggac gccacccaca
     5821 aggcgacgac gcggctggcg aaaggtttcc ggcggatcgg cgttgaggat ttgaacgtgc
     5881 gcggcatggc gaagaaccgc tgccttgccc gctcgattgt ggacggcggt ttcttcgagt
     5941 ttcggcggca gcttgactac aaggcccgcc tttatggcgc ggcggtggtc gtggcggatc
     6001 ggtggtatcc ttcgagcaag acctgttctt gctgcggttc ggtgaaagcc gaactggacc
     6061 tgtcgcaacg ggtgttttgt tgcgagcact gcggtttcgt ggcggatcgg gactggaatg
     6121 ccgcgaaaaa tcttgaacgt ctggccgcaa gctttgcggt gtcagcctgt ggagaggaac
     6181 gctctggcac ggctcgcaag agctgcgtga aacggcctcg aagaagcagg aaccgaacgg
     6241 cattggcgag ctttgcgaaa gcttagctca actttgcgta ggtttcgggg agcggtccaa
     6301 agttgtcgcg cgagacaccc ggccgccggt tcgaatgtag tagcgacata ctaccttcgc
     6361 ttttgcacaa ggtgtaccgt cgccgcagcg gtccgggagg ggctgacgcc ggtgattggc
     6421 cttctcaaga acccgggggt ccgggagggc aagcgatggc caaggcgatt cacatgatgc
     6481 tccgcgtcgt cgacgaggcg cgttcggtcg atttctacca gcgcagcttc ggcctcaa
//
LOCUS       DATILV010000653        11171 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_153167, whole genome shotgun sequence.
ACCESSION   DATILV010000653 DATILV010000000
VERSION     DATILV010000653.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 11171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11171
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153167"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..152)
                     /locus_tag="VLJ17_15495"
                     /pseudo
     CDS             complement(1..152)
                     /locus_tag="VLJ17_15495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199535.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
     gene            590..1306
                     /locus_tag="VLJ17_15500"
     CDS             590..1306
                     /locus_tag="VLJ17_15500"
                     /inference="COORDINATES: protein motif:HMM:NF014582.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ZIP family metal transporter"
                     /protein_id="HSV24419.1"
                     /translation="MAIALSLATFISTLLGGLFALYWRDRLHLIVGFSAGALLGVALF
                     ELIPESLELASAVGRQAVAGVIAVGFAGYMLLDRTVAPHGDKGPRTKKLWHRGVLGAA
                     SLAAHSFLDGFAIGLGFKVSAAVGTIVAAAVLAHDFSDGINTISVILRNKGDNRSAFR
                     WLLIDAAAPVAGAASTLVLPIQQDILGLILALFAGSFLYLSASDLLPESYHDHPTGGT
                     TAMTVLGLLAVYAAVRFASL"
     gene            complement(1349..1822)
                     /locus_tag="VLJ17_15505"
     CDS             complement(1349..1822)
                     /locus_tag="VLJ17_15505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6640 family protein"
                     /protein_id="HSV24420.1"
                     /translation="MDAVFDSNIFARILLTIVTAGYALAPLIADLNATHATNPLWTPH
                     ARFHVVWQVLSYSGFGLIALGLVWIPGPYPTARLYLASGFAAAVLIAFFATFANMRLF
                     GGAHYDVNGYLPKPVQILGRVVKFDANTTVFSIVTLILLIAVISISSADVRVGGQ"
     gene            complement(1806..2012)
                     /locus_tag="VLJ17_15510"
     CDS             complement(1806..2012)
                     /locus_tag="VLJ17_15510"
                     /inference="COORDINATES: protein motif:HMM:NF012594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HSV24421.1"
                     /translation="MERIVGIRTAADVLGVSISTLRRREAAGKLVAEHTAGGHRRYDL
                     AKRRPELFHAAAAASRGEIYGRGF"
     gene            complement(2068..3060)
                     /locus_tag="VLJ17_15515"
     CDS             complement(2068..3060)
                     /locus_tag="VLJ17_15515"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV24422.1"
                     /translation="MLRFLGRCIVATLAFVAAYPLTPAPAQTYPTRPITIIVPLAAGT
                     GMDTVVRLYADELSKSLGHSVVVDNRPGAATMIGTDAVAKAPPDGYTLLVATSSAMAI
                     NPVLYKKIAYDPVKDFVPISFYVKSPFILVVNPELPVKSVPELIKYARGKGGNPLTFS
                     SPGAGVAQHLSGEYMKQKFAIEMTHVPYRNTGQSITDIAAGHVSLGFAEAGASVPLIK
                     DGKLRALAVSASTRLPLLPDVPPFSEAANAPDFEAVSWHILFAPAATPRNIVDKLHAE
                     MMRIMAEPAMQKHTSDLGLIPFDSPSIQGITSYLASEREKWGALVKKLGLEGSQ"
     gene            complement(3235..3525)
                     /locus_tag="VLJ17_15520"
     CDS             complement(3235..3525)
                     /locus_tag="VLJ17_15520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24423.1"
                     /translation="MSKAGLICGVIGVSLLCFGAGAAELPVGPNKDVVARACGSCHDL
                     DMVLEAAGLTREGWNDTIEEMAGYGLKVSPGDRALILEYLTSFLGPDAKKPR"
     gene            complement(3794..4093)
                     /locus_tag="VLJ17_15525"
     CDS             complement(3794..4093)
                     /locus_tag="VLJ17_15525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24424.1"
                     /translation="MSRLDREKWRQEISAKFPHHVDVVPPPTGYSRSEEEEIMNFLES
                     RVGTFDLFGAIADGTPFIRYCFEHAADAQAFRMQFGLGREPLAPAVEAATLKKAV"
     gene            complement(4186..5412)
                     /locus_tag="VLJ17_15530"
     CDS             complement(4186..5412)
                     /locus_tag="VLJ17_15530"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HSV24425.1"
                     /translation="MMRALVAGAVLVAGTVHATNAQTVRPAAPPAQQLRSGFNLPPAG
                     ETRYLADEVILDVPASVPVPTQDAIAARHNMTRLETRSFRLTGRTLHRWRLDGGGTVA
                     SMIRGLNREPQIAGAQPNYLYELTQDNAAAANGAQYAAEKLRLAEAHQFATGRGILVA
                     VIDSGVDASHPELTGAVTANFDSSKDDTKPHPHGTGMAGAIAAHGTLLSGAPAVKLLT
                     VRAFGPKANSAQGTTFDIVKGLDWAAEQGARIVNMSFAGPPDPRMHDALLKAARKGMV
                     LIAAAGNAGANSAPLYPAADPNVIAVTATDAKNALFLGANRGNHIAVAAPGVDVLVPA
                     PEGSYQLTTGTSVAAAEVSGVAALLIERDPALTPSELRRILMNSARDLGPKGRDRDFG
                     SGLVDALQAVKSTRSP"
     gene            complement(5484..6506)
                     /locus_tag="VLJ17_15535"
     CDS             complement(5484..6506)
                     /locus_tag="VLJ17_15535"
                     /inference="COORDINATES: protein motif:HMM:NF015056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetamidase/formamidase family protein"
                     /protein_id="HSV24426.1"
                     /translation="MRSTTLAICVGAAAVCAAAAAQGEEKTHELRASPTTVHRGFFDA
                     TLKPVLTIDSGDIVRLWTTTGNPRYFESLGVPKEKIPAELYAAFEGAPGEGRDDHTLD
                     GPIAVRGAEPGDAVEIKIRSIDLWLPIAAMSFRANRGSLPEDFPYSRDRVFFIDPARK
                     AVEFAPGIVVPAKPFWGVIGVAPPRSMGRVPSGPPNVFGGNMDNHDLQPGTSLFLPVH
                     ASGALISIGDGHAVQGNGEVGLSAVETSLQGEVQIVLHKGMRIGWPRAETPTHYMTIG
                     LHEDLNIAAKMATREMLNFVVETKGLPRDDAYMLLSAAMDLHVTEIVDITKGVHAMLP
                     KAIFQK"
     gene            complement(6692..7555)
                     /locus_tag="VLJ17_15540"
     CDS             complement(6692..7555)
                     /locus_tag="VLJ17_15540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24427.1"
                     /translation="MSSFTLRVRLLAGSILADLTVGLLAAAPITPAVAQEKAAPPDFS
                     WNDQVGWVGAAGNGPGFTAVPGRVPPVSNDPAHPFVPNGVGRQPTYRIADLSNPNLKP
                     WVKAHMKKDNDEVLAGKIAFTARSSCMPAGVPGFMAYGGLNPVYFVQTPKQVWMIYSG
                     DQQVRRIYLDVLHSENPKPSWYGESVGHYEGDTLVIDTIGQNAKTVVDPYRTPHTEKL
                     HVVERWKMADDGQAMEVTFTVEDPDTFNEPWSGTRRYRRVQQPLIEEVCAENNQHLFD
                     YHIPASNAPDF"
     gene            7900..8763
                     /locus_tag="VLJ17_15545"
     CDS             7900..8763
                     /locus_tag="VLJ17_15545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24428.1"
                     /translation="MLCRSSTAAFALAAAVTAIMSGAQAADDTKYPNWKGQWDAINPR
                     LGGQAIKFDPTKAWGPAQQAPLTPEYQKVHEDSMADQANGGLGNYPTARCLPSGMPRL
                     MALPVQEYVITPDTTYILIGHDIRRIFTDGRDWRNWPKDPEPTYDGYAIGKWIDEDGD
                     GRYDVLEVETRGPFKGPRAYDATGLPLHFDNESTFRERFHLDKNDPNILHDEITVFDH
                     ALTRPWSVDKTFRRNPNPRPNWTLTACTEGNNQIVIGDENYFLSGDGLLMPAKKNQAP
                     PDLRYFKQTRR"
     gene            9028..10119
                     /locus_tag="VLJ17_15550"
     CDS             9028..10119
                     /locus_tag="VLJ17_15550"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HSV24429.1"
                     /translation="MTDLTITALRTVLLRVPWPNTPWLKGHAFGDARNLLVLDVETRG
                     GIIGMGYLFSFRSGLRTVATALEETIVPRIIGQDATAVEGIWNDLWRATATYNRGGIV
                     TMAMSALDIALWDAVGKRAGLPLHRLWGHVRSQIPVYGSGCFRGSGGDGMIAKALHYK
                     SQGYRAIKMQVAHTDNLRGDVDNVRRMRDALGPDIDIMIDVNQGWTADIAIAVGHKIA
                     PYDVYWLEEPVPADDFRGYFRVAEALPIRIVGGETHFTRFDLRPFFENPRIPILQPDP
                     MRGGFTDLRKTAVLADTWGMTIAPHLFPELNVQLLASIPNGMWIEDMGLSNDLFVDPV
                     PVIDGMITAPERPGHGLAFKPEILRECQV"
     gene            complement(10549..10818)
                     /locus_tag="VLJ17_15555"
     CDS             complement(10549..10818)
                     /locus_tag="VLJ17_15555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24430.1"
                     /translation="MRKIWIGPAFAAIIATPTAAQQHVVECAQQVGMRLDPSYDQKIQ
                     SAGGRVLRRWYFNHDAQQAAFNDCIAGKASLAAKPSAKTSSRASQ"
     gene            10990..11067
                     /locus_tag="VLJ17_15560"
                     /pseudo
     CDS             10990..11067
                     /locus_tag="VLJ17_15560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782963.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
BASE COUNT         2088 a         3388 c         3427 g         2268 t
ORIGIN      
        1 agcggaggct tcgccgaccg acccgcagct gtcgcacgtc agaaatgcca caatcgcgtc
       61 gctgtcatag ttgtgagcgc aagcggtgta ggcattgcgg ctctcaatcg gtggatcagt
      121 ccttgcttca tcagtaattt gagtgcgcga tagggtggcc gcgcgtccat gtcggcgcgc
      181 gaccgaactg taggacgatc cgcatattac aaaattcgat cagcactgtc gcatcgggcg
      241 gcggtgggga cttcacaaca cggcccgttt tgtgaagccg ttggccgcgc agccaacact
      301 gtccgacacg agaccacggc aggtagcgtt cgttctgccg ccttcttgga gcgcctgtgg
      361 ttggtgcgtt gagccgcaaa gattctcgtt gactttcaac atctcgctcg cactctcagg
      421 ggttcagttc ggcataaatc gccacgtgaa acagacggcc gagcgggatg agcgaaggcc
      481 actgctccag gctatcttga tgtgctcgac gatgacgtcg tcgcctggcg aagacgatgc
      541 gagaggcgcg acgattccgg ctcagagacc gttcagcacg gaggcaccga tggccattgc
      601 cctcagtctg gcgacattca tatcgaccct gctcgggggg ctgttcgccc tctattggcg
      661 agaccggctg catctgattg tggggttcag cgccggcgcc ctgctcggcg tcgccttgtt
      721 cgaattgatc ccggagtcac ttgagctcgc cagtgcggtt ggcaggcaag cggttgcagg
      781 cgttatcgct gtcggttttg ccggctatat gctcttagac cggaccgtcg caccgcacgg
      841 cgacaaaggt ccgcggacga aaaaactgtg gcaccggggc gtcctcggcg cagcgagcct
      901 cgcggcccac agctttcttg atggattcgc gatcggtctt ggtttcaagg tttcggctgc
      961 ggtcggcacc atcgtcgccg ctgcggtgct tgcccacgac ttttccgacg ggatcaatac
     1021 aataagcgtg atccttcgta acaagggcga caatcgatca gctttccgct ggctgctgat
     1081 cgatgccgca gcacccgtgg ctggcgctgc ttcaacactc gtgcttccca tccagcagga
     1141 tatcctgggg ctcattttgg cattgtttgc cggatccttt ctttacctta gtgcgagcga
     1201 cctcctccct gagagctacc atgatcatcc aaccggcgga acgacagcga tgaccgtcct
     1261 cggtctactg gctgtctatg ctgcagtgcg ctttgcgagc ctgtgatcat cttcaagtgc
     1321 atgcgggcga tcgccgccca aaccggcttc attgtccgcc taccctcacg tcggcgctgg
     1381 agatggaaat gacggcaatc aggaggatta aggtcacgat cgagaacacg gtcgtgttgg
     1441 cgtcgaactt cacgacgcga ccgagaatct gcacgggctt gggaaggtat ccgttgacgt
     1501 cgtagtgcgc tccaccgaat agccgcatgt tggcgaacgt agcaaagaag gcgatcaaga
     1561 ccgctgccgc aaagccgctc gcaagataga gccgtgcggt cggatacggg cccggaatcc
     1621 agaccaggcc gagtgcgatg aggccgaagc cggaatagct caacacttgc cataccacgt
     1681 gaaatcgtgc gtgcggtgtc cacaacggat tggtggcgtg ggtcgcgttg agatcggcga
     1741 tgagtggtgc gagcgcgtat ccggccgtga caatggtcag caggatacgt gcaaagatgt
     1801 tcgaatcaaa aaccgcgtcc ataaatttcc ccgcgacttg ccgctgcggc ggcgtgaaaa
     1861 agttccgggc gccgcttggc gagatcgtag cggcgatgac cgcccgccgt atgttcggcc
     1921 accagcttgc ccgccgcttc tcggcggcgc agcgtcgaaa tcgacacgcc cagcacgtcc
     1981 gctgccgtcc tgatgccaac aatcctctcc atattgcaga gaattgcaca gaattcgcgc
     2041 agattacaaa aaatactgtt ttagccctca ctgcgatcct tcgaggccga gctttttcac
     2101 cagcgcgccc catttctccc gctcggaggc gaggtagctc gtgatgcctt gtatggaggg
     2161 tgaatcaaac ggaatgaggc ccagatccga cgtgtgcttc tgcatcgccg gttccgccat
     2221 gatgcgcatc atttcggcgt gcagcttgtc gacaatgttg cgcggcgttg ccgccggcgc
     2281 aaacaatatg tgccacgaga ccgcttcgaa atccggtgcg ttggcggctt cggaaaatgg
     2341 cggcacgtcg ggaagcagag gcagacgcgt cgaagccgac accgcaagcg cgcgcagctt
     2401 gccgtccttg atcagcggta ccgaggcgcc cgcctcggca aaccctaggc tcacatgtcc
     2461 ggccgcgata tcggtgatcg attggccggt gttgcgatag gggacatgcg tcatttcgat
     2521 cgcgaacttt tgcttcatgt attcgcccga gagatgctgc gcgactccag ccccgggtga
     2581 cgagaaagta agcgggttgc cgccttttcc ccgggcgtat ttgatgagct cgggtaccga
     2641 tttgaccggc agctccgggt tgacaaccag aatgaacggc gatttcacgt agaacgagat
     2701 cggcacaaaa tccttcaccg ggtcgtaagc gatcttcttg tagaggaccg gattgattgc
     2761 catggccgag ctggtcgcca ccagcaaggt gtagccgtcg ggtggcgcct tggcgaccgc
     2821 gtctgttccg atcatggtcg cggcgcccgg gcggttgtcg acgactacgg agtggcccag
     2881 cgacttcgat aattcatcgg catacaagcg cacaacagtg tccatgccgg tgccggcagc
     2941 gagtgggacg atgatcgtga tggggcgggt cggataggtt tgggctggcg ccggtgtcag
     3001 cggatacgcg gccacgaagg cgagcgtagc cacgatgcaa cgtccaagga agcgcagcat
     3061 gtttcctcca ctccggctct tttttgccgg ctgtctttgg gtcgcccttc ttaagaggag
     3121 ctaacccagt cgctgcaata ccatagacgg gcgctcttgc ggcgtccatt ccgatccgca
     3181 gggcccgtgg cacgatcgtg cagcgatgcg tctcgccgct gcggcaggcg aacgctatcg
     3241 cggtttcttg gcgtccggcc caaggaagct cgtcaggtat tcgagaatga gtgcccggtc
     3301 accgggcgac accttcagcc cgtatcccgc catctcttcg atggtatcgt tccagccttc
     3361 ccgggtcagc ccggcagctt ctaacaccat gtccaggtcg tggcacgatc cgcatgcacg
     3421 agccacaacg tctttgttcg ggccaaccgg cagctctgct gcacctgcgc cgaagcacaa
     3481 cagggacacg ccgatcacgc cacatatcag tcccgctttg ctcattccga acgtctccaa
     3541 tgctgaggac ggtacgaatg gcacggtaat actgggttcg tcatctacta ttgtgcaatt
     3601 ggagtgcgtt ccgatgagat cccccgccgt tatgcccgcg tttgtcgcgg acgcgcctgt
     3661 cttgccgccc cgggcttgtc ccggacatct cgattatgcg tgccgtgccg cgcctaaaat
     3721 tcggcgtcgc cgggacaagc cgggcgacgc cggtaggtag ttaaaagcga tcgaaaattc
     3781 gccttctacg cgttcagact gccttcttta atgtggccgc ttcgactgcg ggggccagcg
     3841 gctcgcgccc aagaccgaac tgcatgcgga atgcttgcgc gtcggccgcg tgctcgaagc
     3901 aatatcgaat gaaaggagtg ccgtcggcaa tcgctccgaa gagatcgaac gtgccgaccc
     3961 ggctttcgag gaagttcatg atttcctcct cttcgctccg gctgtatccg gtcggcggcg
     4021 gaacgacatc gacatggtgc ggaaatttcg cgctgatttc ctggcgccac ttttcacggt
     4081 ctagacgact cacggcatcc ctcctgctcg gcttgaacac acttatgttc ttgttttgtt
     4141 ctagctgtca aggccaaacc gcacgcggca gttcgtggct ctcgattacg gcgagcgtgt
     4201 cgatttgacg gcctgtagtg cgtcgacaag gcctgagcca aaatcgcgat cgcgcccctt
     4261 cggcccgaga tccctcgcag agttcatcag aattctgcgg agctcgctgg gtgtcagcgc
     4321 gggatcgcgt tcgatcaaca atgctgcaac tccgctcacc tccgcggccg ccaccgatgt
     4381 gccggtggtg agttggtagc ttccctcagg cgccggtacc agaacgtcga cacccggggc
     4441 cgcaaccgcg atgtgatttc cccgattggc gccaaggaac agcgcattct tggcgtccgt
     4501 cgccgtgacc gcgatgacgt tcggatcggc cgccggatag agcggtgcag aatttgcgcc
     4561 ggcattgccg gcggccgcaa tcagcaccat gccctttcgg gcagccttga gtagtgcatc
     4621 gtgcatgcgg ggatcgggcg ggcccgcaaa gctcatattg acgatgcggg ctccttgctc
     4681 ggccgcccaa tcgagcccct taacgatgtc gaatgtggtt ccctgggcgc tgttggcctt
     4741 tggaccgaac gccctgacgg tcagcagctt gacggccggt gctccgctca agagtgtgcc
     4801 gtgcgccgca attgctcccg ccatgccggt gccatgggga tgtggcttgg tgtcatcttt
     4861 cgaggaatcg aaattcgccg tgactgcgcc ggtgagttcg ggatgggatg catcgacgcc
     4921 ggagtcgatc actgcgacaa gaatccctct tccggtcgcg aactgatgcg cctcggcgag
     4981 ccgcaatttc tcggccgcat actgagcgcc gtttgccgca gcggcgttat cttgcgtcag
     5041 ctcataaaga tagttcggct gcgcgcctgc gatctgcggt tcgcgattga gaccgcggat
     5101 catcgacgcc acggtgccgc cgccatccag gcgccagcga tgcagggtac ggccggtcag
     5161 gcgaaagctt cgtgtttcca ggcgcgtcat gttgtggcgc gctgcgatcg catcctgggt
     5221 cggaacagga acgctcgcgg ggacgtcgag aatgacctcg tccgccagat agcgtgtttc
     5281 accggcagga ggcaggttga agccgctgcg gagctgttgg gcgggcggag ccgcaggccg
     5341 caccgtttgg gcatttgtcg catgtacggt accggcaacc agcacggcgc cggccacgag
     5401 ggctcgcatc attgtcaagg tcatctcccg cgccatggcg cattgtccgc aacctggaac
     5461 gcgttccaag gcgcagtcac tgattacttc tgaaagattg cctttggcaa cattgcgtgg
     5521 acgccctttg tgatgtcgac gatttccgtc acgtgcaggt ccatggcggc actgagcagc
     5581 atataagcat cgtcgcgcgg caggcccttg gtctccacca cgaagttgag catctcgcgg
     5641 gtggccatct tggccgcgat gttcaggtct tcatgcaagc cgatggtcat atagtgggtc
     5701 ggggtttccg ccctcggcca gccgatgcgc atgcccttgt gcagcacgat ctgcacctcg
     5761 ccttgaagcg aggtctcgac ggcggatagg ccgacttcgc cgttgccttg aacagcgtgg
     5821 ccgtctccga tcgatatcag cgcgccgctg gcgtggacgg gcaggaacaa gctcgttccg
     5881 ggctgaagat cgtggttgtc catgttgccg ccgaacacgt tgggcggtcc actcggcacc
     5941 cggcccatcg agcgcggcgg tgcgacgccg atgacgcccc aaaacggctt cgccggcacc
     6001 acaatgcccg gagcgaattc aacggccttc ctggcgggat cgatgaaaaa tacgcgatcc
     6061 cgcgaatagg gaaaatcttc cggcagcgaa ccgcggttcg cccggaagct catggcggcg
     6121 attggcagcc agagatcgat ggagcgaatt ttgatttcga cggcgtcgcc cggctcggcg
     6181 cctctcacgg caatcggtcc gtcgagcgtg tgatcgtcgc ggccctcacc gggcgcccct
     6241 tcaaacgccg catatagctc ggcggggatt ttttccttgg gcactcccaa gctctcgaag
     6301 tagcgcgggt tgccggtggt ggtccacagc cgcacgatgt cgccggaatc gatggtcagc
     6361 acgggcttga gcgttgcgtc gaaaaatccg cggtggacgg tggttggtga agccctcagc
     6421 tcatgagtct tttcttcgcc ttgagctgcg gcggccgcac agaccgcagc cgcaccgacg
     6481 catatagcca atgtcgttga tctcattttg cgctccttcg aacgaattct gatcaactgg
     6541 aatcactctg taggacgggc gcacttcgct ttgcctaccc tacgatctgg acgccaccgt
     6601 cgtgtccgcg cgagcatcgt tttcttgccc ggcttcagca agcaaggatg gccgtgacaa
     6661 gcccggccat cactcctgga aaaaacccgg ctcagaaatc cggcgcgttc gaggccggga
     6721 tgtgatagtc gaacagatgc tgattgttct cggcgcagac ttcttcgatc agcggttgct
     6781 gcacgcgccg ataacgccgc gttcccgacc acggctcatt gaaagtgtcg gggtcctcta
     6841 ccgtgaaggt cacctccatg gcctggccgt catcggccat tttccagcgc tccaccacgt
     6901 gcagcttctc ggtgtgcggc gtgcggtaag gatcgacgac cgtcttggcg ttctgcccga
     6961 tggtgtcgat gacaagtgtg tcgccctcgt agtggccgac cgactcgcca taccatgacg
     7021 gcttcggatt ctccgaatgg agcacgtcga gatagatgcg ccgcacctgc tgatcgcccg
     7081 aatagatcat ccagacctgt ttcggcgttt gaacgaagta aaccgggttc agtccgccgt
     7141 aagccatgaa gcccgggacg cccgccggca tacagctcga tcgcgccgtg aaggcgatct
     7201 tgccagcaag cacttcgtca ttgtccttct tcatgtgcgc cttcacccac ggcttcaggt
     7261 tcggattgct gaggtcggcg atccgatagg ttggctgtcg gccgacgccg ttgggaacga
     7321 agggatgcgc cggatcgttg ctgacaggcg gcacgcggcc cggaacggct gtgaagccag
     7381 gaccattgcc tgcggcccca acccacccga cctgatcatt ccatgagaaa tccggcggag
     7441 ctgccttttc ttgcgcgaca gccggcgtga tcggcgccgc tgccaagagg ccgaccgtga
     7501 ggtcggccaa gatgctgccg gcgagtaacc ttacgcgcaa agtgaacgag gacatagttg
     7561 cgcctcctat cgcggtgttt cctcacattc cagtgttgcg tctctaacga acggttcagc
     7621 gttccgggtc ccgagcacag cgagggagcc cgcaagccat aactacaggt cccggtttat
     7681 ggattccggg ctcgccgctt cgcggccccg gaacgacgaa accctcagtc aacggtccga
     7741 tcagactaca gcattcatgg gttgttcgta agggtgcgga tttcgcacgc cgctctcgcc
     7801 gatattgctg cgccgcccca acggtgtatc ctttcactaa aagcatgaac gtcgcgtcca
     7861 tcgcgatcaa gctatccgac aatgcacggg aggatcctca tgttgtgccg aagttcgacc
     7921 gcagcgttcg cactcgccgc cgccgtgacg gcgataatga gcggggcgca ggcggccgat
     7981 gatacgaaat atcccaactg gaaggggcag tgggacgcca tcaacccgcg gctcggaggc
     8041 caggcaatca agttcgatcc gaccaaggcg tggggaccgg cgcaacaagc cccgctgacg
     8101 ccggagtatc agaaggtcca tgaggacagc atggccgacc aagccaacgg cggccttggc
     8161 aattacccga ccgcccgctg cctccccagc ggcatgccgc gcctgatggc gttgccggtg
     8221 caggaatatg tcattacgcc ggacaccacc tatatcctga tcggccacga catccgtcgc
     8281 atcttcaccg acgggcgcga ctggcgcaac tggcccaagg atcccgagcc gacctacgac
     8341 ggctacgcga tcggcaaatg gatcgacgag gacggcgatg gccgctacga cgtgctcgag
     8401 gtcgaaacac gcgggccctt caaagggcct cgcgcttacg acgccaccgg cctgccgctg
     8461 cattttgaca atgagtcgac cttcagggag cggtttcatc tcgacaagaa cgaccccaac
     8521 attcttcacg acgagatcac cgtattcgac cacgccctga cgcggccctg gagcgtcgac
     8581 aagacgtttc ggcgcaaccc caatccacgt ccaaactgga cgctgacagc gtgcaccgag
     8641 ggcaacaacc agatcgtcat cggcgacgaa aactatttcc tgagcggcga cgggctgctg
     8701 atgccggcca agaagaacca ggcgccgccg gatttgaggt attttaagca gaccaggagg
     8761 tgagggggcg cgggcgggac cgacgcgccc atcttccgcg cggaatttcg ggtctctcat
     8821 tcacttccgg cgcagcgtct cgaacggaat ggtcatgatg taatgctctg cgcgtgctcc
     8881 agcgccagct tgatgatgcg gtcgggcgtc ttgcggtttt tttgacgagg gcgagtacga
     8941 taacgatccg tcgcgcggtg gcctgactta cccggccatg ttatccgaac aattgcgaaa
     9001 tcagccgtca accacccgag cgtctcaatg accgacctca ccatcaccgc cctgcgcacc
     9061 gtcctcctgc gcgtcccctg gccgaacacg ccgtggctca aaggtcacgc cttcggcgac
     9121 gcccgcaatc tgctcgtgct cgacgtggag accaggggcg gcatcatcgg catggggtat
     9181 ctgttctcgt tccggtcggg attgcgcacc gtggcgacgg cgttggagga gacgatcgtg
     9241 ccgcgcatca tcggccagga cgccaccgcg gtcgagggca tttggaacga tctgtggcgc
     9301 gcgaccgcga cctacaaccg cggcgggatc gtgacgatgg cgatgtcggc gcttgatatt
     9361 gccctgtggg atgccgtggg caagcgcgcc ggcctgccgc tacatcgcct atgggggcac
     9421 gtgcgctcgc agataccggt ctacggcagc ggctgcttcc gcggctccgg tggcgatggc
     9481 atgatcgcaa aggcgctgca ttacaaatcg caaggctatc gggcgattaa gatgcaggtt
     9541 gcgcacaccg acaacctgcg gggcgacgtc gacaacgtgc gccgcatgcg cgacgcgctc
     9601 ggccctgaca tcgacatcat gatcgatgtc aatcagggct ggaccgccga tatcgcgatc
     9661 gcggtgggcc acaagatcgc accctacgac gtctattggc tggaggagcc ggttccggcc
     9721 gacgacttca gaggctattt ccgcgtggcg gaggcgctgc cgatccgcat cgttggcggc
     9781 gagactcact tcacccgctt cgatctgcgg ccgtttttcg agaatcctcg cattccgatt
     9841 ttgcaacccg atccaatgcg cggaggcttt accgatctgc gcaagactgc ggtgctcgct
     9901 gacacttggg gcatgacgat tgcgccgcac ctgtttccgg agctgaacgt gcagctgctc
     9961 gcctcgatcc ctaacgggat gtggatcgaa gacatgggct tatcgaacga tctgttcgtc
    10021 gatccggtgc cggtgatcga tggcatgatc acggcgccag agcgacccgg ccacgggctt
    10081 gcgttcaagc cggaaatttt gcgcgaatgc caggtttgag gctgcggtgc cgcggctttt
    10141 tgcttgccta gcgtgctgac actaacgttt gttacggtca ttccagggcg ccaccgtcag
    10201 gtggcgagcc cgcaatccat aactctcggc cagtgattat ggattccggg gctcgcgcat
    10261 aagcgcgtcc ctgaatgacg ccgatgggga tgtgttggag acgaaacgcc acaccgcaca
    10321 ccgatgagct tgaatgatat atcgcgccgc cgctcggtca cctctccccg ttgggaagag
    10381 ggcggatcgc gctggcgcga tccgggtgag ggggaacctg cctcacaatg ggttccaccg
    10441 cgccctcacc cggaatgggc gcgcgaagcg cgcccatgac gacctcgcca aagagaggcg
    10501 aggagaagag cagctgcctc agccgcgtcg ggatatgtac caaatcattc attgtgaagc
    10561 gcgcgacgac gtcttggcgg atggcttggc ggcgagactc gcttttccgg cgatacaatc
    10621 gttgaatgcc gcctgttggg cgtcgtgatt gaaataccat ctgcgtagca cacgacctcc
    10681 ggcggattgt attttctgat cgtaactggg gtcgaggcgc attccgacct gttgggcgca
    10741 ctcgactaca tgctgctggg ccgctgtggg cgttgcaatg atggctgcga aagccggtcc
    10801 aatccaaatt tttcgcatct gttcctccca agtggatctt ggccattgtt gcccgatggt
    10861 gggagatcct ggtgtgagct ggctcacacg gcgttcggaa aatctgggtc attgcttctc
    10921 cctcccgcct tgtagggcag gagttcgcag catcattgag cttgatttgg cgcctgtagg
    10981 gctagacgca agaccattgc ttatgcgcgg gtatcctcgc acgaccagaa agacgatctg
    11041 gaacggcaaa aacaggttct tgttttgcgt aggtttcgga gagcggtgtg ccaaaccaga
    11101 atggtcgagc aagagggcgg ctcacggtcc ggattccagg ttaacgctca ttgagctgga
    11161 ggaggtagtt c
//
LOCUS       DATILV010000654         3773 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2967765, whole genome shotgun sequence.
ACCESSION   DATILV010000654 DATILV010000000
VERSION     DATILV010000654.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3773
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2967765"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(315..683)
                     /locus_tag="VLJ17_15565"
     CDS             complement(315..683)
                     /locus_tag="VLJ17_15565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24431.1"
                     /translation="MFDAKIIAVAIVVLVAPPVSSGASAAEHKCDPVSEDGWSVVAER
                     ETLSQIDGLPYQSGTDWFVDRVITALPFCHYFNSLGVYSMRSYSLDPVVTEEHVAICR
                     RSGQSDSIAVAPYTGRCPPR"
     gene            790..2454
                     /locus_tag="VLJ17_15570"
     CDS             790..2454
                     /locus_tag="VLJ17_15570"
                     /inference="COORDINATES: protein motif:HMM:NF013086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSV24432.1"
                     /translation="MSQDAADRIGAISGEVSRRAFLSAGAAGAALAGASAQKADAQGT
                     SPRIWDRSADVVVIGAGVSGLPAAITARDLGASVIVVDENFDIGGRGILSGGRVHLGG
                     GHALQQKAGIKDSADQIFADWVRHDTADARYSDRDLVRVFADENVATFNFLVENGVKF
                     NERPIGPERASTVPRTFVTVEWHIPSQLIAPGRGRNGSGLVRQLEIAARQKGAEILLQ
                     HEMKGIVREQNRSGKVLGITASHNGATVNIQARKGVVIATGGHTGNVNFRRMFDPRLT
                     EEYQQACEPYVHQGADGELAAMAIGASLWATANQTAEAGSAITKTRHIGCRWGYATLV
                     YQPESPMFHLAKATGLTVADWQDVIFVNQMGRRFWNEADGSYKFFAAAMAYNGDPGKL
                     NGGGPIWAVFDADAVAREKWNPTPPHVDPDGFFFSADTIGELAGRIGNPYQKKPMSGA
                     VLQETVNRYNGFVAAGIDQEFNKPTPMYKIETPPFYAAWSTPILHDTLTGLRTTADAE
                     VVDIHGEVIPGLYCAGESQGGFAQHGLARCLVFGRVAGRHAAKRTA"
     gene            2546..3562
                     /locus_tag="VLJ17_15575"
     CDS             2546..3562
                     /locus_tag="VLJ17_15575"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HSV24433.1"
                     /translation="MGRDRAATSRALNPALPHKGGARRGHGMTAGAATHVTVISVDEP
                     AEVAVGADLLLTVLVSCPAGCDLSGVPVEVTAPNGATTTIEPAAGDADIAVVRHFALK
                     APLEVGEHIWRLSCAAHESSGSHHDASLVRVPIRTRPHETSLAVWAIPSPVVTGQPFA
                     IKVGAKSAAGCKLTGMTIAVCDEVGAVLASHVLGEKPWPGTGALYWTELELVAPAEAG
                     MFSWSVKFGAADLAVPHRDASSRFSIAIVQPPEHRLTVKVIEQKTATPIENAQVRLGA
                     YRAATGASGLAELMLPKGSYDLDVWKSGYEAPTTPVTVDADLAVEIAITALPEENPDA
                     AWLM"
     gene            3576..>3773
                     /locus_tag="VLJ17_15580"
     CDS             3576..>3773
                     /locus_tag="VLJ17_15580"
                     /inference="COORDINATES: protein motif:HMM:NF013544.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSV24434.1"
                     /translation="MTKNFSAASCGVIAPANHDTRALRALRKAQRSLSHKKRGSRNRR
                     KAIRRVARLHQRVANAREDFST"
BASE COUNT          714 a         1179 c         1213 g          667 t
ORIGIN      
        1 gcgacgcctc gatttgaggc gtttgcccat tgcgccattc agcggagata tttcattggt
       61 cgacataatc ggccatctcc agcctcagat cgcgccgctg caacaatctt tggcaccgtt
      121 cacgacatgc tgcatgtcat aattgtcgcg cgcccagtac tggggccgcg actgccaacg
      181 cctaccgatg ggagagcagg cgttggttgt gaagataaag agcacacggg cattttgttg
      241 tccatacggt cgcgacctta gcggagcgat taatctcgac ccataacggc catcctcgcc
      301 tctgtgcagg gcatctaccg cggcggacac cggcccgtat agggcgcgac tgcaatgctg
      361 tcgctctgcc cggagcgccg gcaaattgcg acgtgttcct cagtcactac tggatcgagc
      421 gagtaggacc gcatgctgta gacgccgagt gaattgaaat agtgacagaa cggtagcgcg
      481 gtgatcacgc ggtcgacgaa ccagtcggtc ccggactggt agggcaaacc atcgatttgg
      541 cttaacgtct cacgctccgc aaccacgctc cagccgtctt cgctcacggg atcgcatttg
      601 tgttcggccg cgctggcgcc gcttgaaact gggggtgcca ctaggaccac gatcgcaact
      661 gcaataatct ttgcatcaaa catcacgagt ctctcgggag tctgggcccg ggcaacggtt
      721 agctggtgtc ttgacccggc cacagccaaa gtcaagatta cgcgctttga agcgaccggg
      781 agggaatcca tgagccagga cgcggcggat cgcatcggtg caatttcggg cgaggtaagc
      841 cggcgtgcct tcctgtcggc cggtgcggcc ggcgctgcct tggcgggcgc cagcgcacaa
      901 aaagccgatg cccaaggcac ttcgccacgc atttgggacc ggtcggcgga tgtggtcgtg
      961 atcggagcgg gtgtctccgg cctgccggcc gccatcacgg cgcgagatct cggcgcctct
     1021 gtcattgtgg ttgatgaaaa cttcgacatc ggcgggcgcg gcatcttgag cggtgggcgc
     1081 gtgcatctcg gcggcggtca cgccttgcaa cagaaagcgg gtatcaagga ttcggccgat
     1141 cagatttttg ccgactgggt acgccacgac accgccgatg cgcgttacag tgaccgcgat
     1201 ctggtgcggg tcttcgccga cgagaatgtc gcgactttca attttctggt cgagaatggc
     1261 gtcaagttca atgagcggcc gatcggcccg gaacgcgctt cgacggtgcc gcgtaccttt
     1321 gtgacagtgg agtggcacat tccgagccaa ctgattgccc cgggtcgcgg ccgcaatggc
     1381 tccggactgg tccgccagct cgagatcgcg gcacggcaga agggcgcgga aatcctgttg
     1441 cagcacgaga tgaaaggcat cgtccgggag cagaaccggt ccggcaaggt tctcggcatc
     1501 actgcgagcc ataacggtgc gacggttaac atccaggcgc gcaagggcgt cgtcattgcg
     1561 accggcggcc ataccggtaa tgtcaatttc cgtcgcatgt tcgatccgcg gctcacggag
     1621 gaataccagc aggcctgcga gccctatgtg caccagggtg cggacggcga gcttgccgcc
     1681 atggcgatag gggcgtcgtt gtgggcgacc gccaaccaga ccgcagaggc ggggtccgcc
     1741 attaccaaga cacgccacat cggctgccgg tggggctatg ccacgctggt ctatcaaccc
     1801 gaaagcccca tgttccatct cgccaaagcg accggcctta cggtcgcgga ttggcaggac
     1861 gtcatcttcg taaatcagat gggccggcgg ttctggaacg aggcggacgg ctcgtacaaa
     1921 ttcttcgccg ccgcgatggc ctataacggc gatccgggca agctcaacgg cggcggtccg
     1981 atctgggcgg tcttcgatgc cgatgcagtt gcacgggaga agtggaaccc gacgccgccg
     2041 catgtcgacc cagatggctt cttcttcagc gctgatacca tcggcgaact cgccggccgg
     2101 atcggtaatc cctatcaaaa gaagccgatg tcgggcgcgg tgctccagga gacggtgaac
     2161 cgctacaacg gcttcgtcgc tgccggcatc gaccaggaat tcaacaagcc gacgccgatg
     2221 tacaagatcg agacgccgcc gttctacgca gcgtggtcga cgccgatcct gcacgacacg
     2281 ctcacgggcc tgcgaaccac cgccgacgcc gaggtggtcg acattcacgg cgaggtcatc
     2341 cccggccttt attgcgccgg cgagtcgcag ggcggattcg ctcagcacgg tctcgcgcgg
     2401 tgcctggtgt tcggccgcgt cgccggccgc catgccgcta agcgtaccgc atgacggccg
     2461 tccgcaatgt cgtggggcta tcgcatatgc gggccccttt ctctcctctc cctggtgggg
     2521 aatgctcggg ggtgggagtc gacgcatggg gcgcgatcgg gccgcaacct cccgcgccct
     2581 caacccagcc ctgccccaca aagggggagc gagaagaggc cacggcatga cggccggggc
     2641 cgcaacccat gtgaccgtca tttcggtgga cgaaccagcg gaagtcgcgg tcggcgcaga
     2701 tctcctgctg acggtcttgg tatcgtgccc ggccggatgc gacctctcgg gcgttccggt
     2761 agaagtgacg gccccgaacg gcgcgaccac aacgatcgag ccggccgccg gcgatgcgga
     2821 tattgccgtg gtgcgccatt tcgcgctcaa ggcgccgctc gaggtcggtg agcacatctg
     2881 gcgcctctct tgcgcggctc acgagagcag cggttcacat cacgacgcaa gcctcgtgcg
     2941 ggtgccgatt cgaacccggc cacacgagac cagtcttgcc gtatgggcaa ttccgtcgcc
     3001 ggtggtgacg gggcagccat tcgccatcaa ggtgggggca aagtccgcgg ccggatgcaa
     3061 gcttacgggc atgaccatcg cggtatgcga cgaggttggc gccgtactgg cgagccatgt
     3121 cctcggcgag aagccctggc cgggcaccgg cgccttgtat tggaccgaac tcgaattggt
     3181 cgcgcccgcg gaggccggaa tgttttcatg gtcggtgaaa ttcggcgccg ccgatcttgc
     3241 ggtaccgcac cgcgatgcat catcccgatt cagcatcgcg atcgtgcagc cgcccgagca
     3301 caggctgacc gtgaaagtca tcgaacagaa aaccgcgaca ccgatcgaaa atgcgcaagt
     3361 gcggctcggc gcctaccgcg ccgcgacggg cgcatccgga ctcgccgaac ttatgctgcc
     3421 caaaggctcc tacgatcttg acgtatggaa atccggctac gaggcgccaa cgactcccgt
     3481 cacggtcgat gccgacctcg ccgtggagat cgcaatcacg gctttgccgg aggaaaatcc
     3541 ggatgctgcg tggctgatgt gaggacgcgc gcctcttgac caagaatttt agcgcggcaa
     3601 gctgcggggt tattgcccct gccaaccacg acacgagagc attgcgggcg ctccgcaagg
     3661 cgcaacgcag cctgtcgcac aagaagcgcg gcagccgcaa ccggcgcaag gcaatccgcc
     3721 gcgtggcgcg tctgcaccag cgggtagcga acgcgcgcga ggatttctcc aca
//
LOCUS       DATILV010000655         2543 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1690858, whole genome shotgun sequence.
ACCESSION   DATILV010000655 DATILV010000000
VERSION     DATILV010000655.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2543
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1690858"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..258
                     /locus_tag="VLJ17_15585"
     CDS             <1..258
                     /locus_tag="VLJ17_15585"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HSV24435.1"
                     /translation="WASETFAQPGRRGRQHWVQHITFEGTADGVAVRSYWKVVQGLAS
                     TNTRTLNAMGFYDDFCVKFDGRWLIKEKRIYLCNDETPLPW"
     gene            601..2040
                     /locus_tag="VLJ17_15590"
     CDS             601..2040
                     /locus_tag="VLJ17_15590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012455660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1182 family transposase"
                     /protein_id="HSV24436.1"
                     /translation="MKRFIEGADRDQTTLLPECLDDWVDESNPVRVVDAFVDALDLKQ
                     LRFDGMVPEVTGRPSYHPSALLKLYIYGYLNRIQSSRRLEREAKRNLEVIWLVRRLTP
                     DDKTIADFRKDNGPAIKKVCARFVELCRQMGLLTKASVAIDGSKFKAVNTRDKNFTKG
                     KVERRRRQLEESVARYLAQLDTADLQDPSEALAARTSHLKEKLAKLAIEMRKLDAYET
                     EMLASPDQQISLTDPDCRSMATSGRGSGVVGYNVQVAVTTEHHLIIAHEVTNSGTDRA
                     QLANMGCQAKQVLGVDKLEAVADRGYYSSTEIKACDDAGIAVTLPKPMTSGAKADGRF
                     GKQDFVYDAAEDIYRCPAGEKLTYRMTSEQDGKMMRRYWTNACPNCPLQSKCTTGNER
                     RIPRWEHEHILEAAQRRLDENPQAMRERRETVEHPFGTLKMRMGSTHFLMKRLPKVAT
                     EMALHVLAYNITRVMNIMGVGPLIAAMRA"
     gene            complement(2274..>2543)
                     /locus_tag="VLJ17_15595"
     CDS             complement(2274..>2543)
                     /locus_tag="VLJ17_15595"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSV24437.1"
                     /translation="LPTIAEQGVPGYEAVLRYGVVAPAGTPRSVIDRLNKELNAALAH
                     DEVRARFVTLGTEILTSTPEEHGADIAREVSKWSALIGTLGIKGE"
BASE COUNT          537 a          722 c          804 g          480 t
ORIGIN      
        1 tgggcgagcg agaccttcgc ccaaccaggg cggcgcggcc gtcagcactg ggtgcagcac
       61 ataacgttcg agggcaccgc ggacggggtt gcggtgcgct cctattggaa ggtggtgcag
      121 gggcttgcct ctaccaatac gaggacgctc aacgccatgg gcttctatga cgatttctgc
      181 gtgaagttcg acggccgctg gctgatcaag gagaagcgca tctacctctg caatgacgag
      241 acgccgctac cgtggtgagt tcggcgatga tcgtgagctc aagcggttga taggcgagcg
      301 atctcgtcgc gaaacgctga tcgtgcccct tcatatcgag gaatactgcg cctttagcgg
      361 catcgggcgc gcaattggga tggcacgcat caaaccgtag gtctgggtcg tactcgacaa
      421 atctcgacct ccatggccgc tcataggtca cagcggcgca tatctatgtc cgctcgaatg
      481 tcggcagtcg ccatgtaagc ggactcgtta tgctcgcact gatcttagcc gctcatgacc
      541 ctggctgcgt gaaaacgtcg agtcaggtat gtgtggcctc gcaatttgcg ggggcgattg
      601 atgaagcggt tcattgaggg ggctgatcgc gatcaaacga cgttgttgcc ggaatgcctg
      661 gatgactggg tcgatgagag taatccggtg cgcgtggtcg atgcgtttgt cgacgcgctc
      721 gatctgaagc aactgaggtt cgatgggatg gtgcctgagg tgaccgggcg gccttcctac
      781 catccgtcag cgctgctgaa gctctacatc tacggctatc tcaaccgcat tcagtcgagc
      841 cgtcgtctgg agcgcgaggc gaagcgaaat ctggaggtga tctggctcgt ccggcggctg
      901 acgccggatg acaagaccat tgccgacttc cgcaaagata atggtcccgc catcaagaag
      961 gtttgcgcgc gcttcgtcga gttatgccgc cagatgggtt tgctgacgaa ggcgagcgtg
     1021 gcgatcgacg gctccaagtt caaggcagtc aacacccgcg acaagaactt cacgaagggg
     1081 aaggtcgagc gacggcgccg ccaattggaa gaaagcgtgg cgcgctatct ggcgcagctc
     1141 gacaccgccg acctgcagga tccgtcggag gcgcttgccg cgaggacctc gcatctgaag
     1201 gagaagctcg ccaagctggc aatcgaaatg cgcaagcttg acgcctacga gaccgagatg
     1261 ctggcttcgc ccgatcagca gatctcgctg accgaccccg actgccggtc gatggccacg
     1321 agtgggcgtg gttcgggtgt cgtcggctac aatgtgcagg tcgcggtgac taccgagcac
     1381 catctcatca ttgcgcacga ggtcacaaat agcggtacgg atcgggcaca acttgcaaac
     1441 atgggctgcc aggccaagca ggtgctcggg gtcgacaagc tcgaggccgt cgccgaccgc
     1501 gggtactaca gcagcacgga gatcaaggcc tgcgatgatg ccggcattgc ggtgacattg
     1561 ccgaagccga tgacgtcggg cgcgaaggcg gatggccgtt tcggcaagca ggacttcgtc
     1621 tacgatgctg ccgaggatat ttatcgctgt cccgccggcg agaagctgac gtaccgcatg
     1681 acgtccgagc aggacggcaa gatgatgcga cgctattgga cgaacgcctg cccgaattgc
     1741 ccactgcagt cgaaatgtac gacgggcaac gaacggcgca ttccacgatg ggagcacgag
     1801 cacattctgg aagccgctca gaggcggctt gacgaaaatc cgcaggcgat gcgtgaacgc
     1861 cgcgagacgg tcgagcatcc gttcggtacg ctgaagatgc gtatgggctc cacgcacttc
     1921 ctgatgaagc ggctgccgaa ggtcgccacc gagatggcat tgcacgtact cgcctacaac
     1981 atcacgcgcg tgatgaacat catgggcgtt gggccgctga ttgcggcgat gagagcgtga
     2041 cgcgacaacg cggtggcggc cgccatcgct ccaccagatc gctcagactg ctccggggag
     2101 gtcaaacgtg cgattctgac ctagttcaag ccaaatcgcc gctcgccgac gatccactgc
     2161 gacctcaaac cggctcaaga cgttatcacg caaccaagac ccaaagccga cataagacgg
     2221 acggatacgc cgatcggaga ttgtggaatg tcgggaaggc ccgtcagtgt tcgctattcg
     2281 ccctttatgc ctagtgtgcc aatgagcgcg gaccatttgc tgacttcgcg agcgatgtca
     2341 gcaccatgct cttcaggcgt tgaagtcaaa atctccgtgc cgagtgtcac aaatctggcg
     2401 cgaacctcat cgtgagcgag tgcagcgttg agttctttat tcaacctgtc gatcaccgag
     2461 cggggcgttc cagccggggc aactacgccg taacgaagga ccgcctcgta tcctggcaca
     2521 ccttgctcgg cgatggttgg aag
//
LOCUS       DATILV010000656         2408 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1691151, whole genome shotgun sequence.
ACCESSION   DATILV010000656 DATILV010000000
VERSION     DATILV010000656.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2408)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2408)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2408
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1691151"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..427)
                     /locus_tag="VLJ17_15600"
     CDS             complement(<1..427)
                     /locus_tag="VLJ17_15600"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSV24438.1"
                     /translation="MDDRSGGVVTAPALLLENVVKTYGPIRAVNGVSLVARPGEFIAL
                     LGPNGAGKSTLFQLLSGLFVPDSGRIEVMGHDMTRDAVPALARLGIVFQQPTLDLELS
                     VTSNLLFHAGLHGIPRSIAKPRIEAELARLGLADRAHDKA"
     gene            563..1549
                     /locus_tag="VLJ17_15605"
     CDS             563..1549
                     /locus_tag="VLJ17_15605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011581933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent catabolism-associated
                     beta-propeller protein"
                     /protein_id="HSV24439.1"
                     /translation="MPIPRLLSALFCIALFAVALSAASAKDTGLVFVSNEKTNNLIVI
                     DPRTNKVVKDLKTSRRPRDMHFNSDHTKLYVACGDDDVIDIIDVAKLEVIGKLSTGSS
                     PETFGIDESRRRIYVSNEEGSSLSVIDLDQNIIVQEVPTGAEPEGVFVSEDGHFIYVT
                     SEVGDLIHLIDADSGNVVQDVVVGTRPRRFAATPDRKELWVSAELSGEVYIIDREKFT
                     VEGKIEFLPPGMRKTDVTPVDLRITRDGKTAYVTLGHAAHVAVVDVPTRKIQGYILVG
                     KRSWGLGMSRDERTLYVANGFGDDVTVIDLKTRKATVSIPVGRIPWGVVIDD"
     gene            1569..>2408
                     /locus_tag="VLJ17_15610"
     CDS             1569..>2408
                     /locus_tag="VLJ17_15610"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV24440.1"
                     /translation="MGTLRFARLTLVVFLALAAPAFAQPAASPPTTPRQHISIGYVEI
                     EGDPRYEPVRAYERLILKTRDHPFAGAQIGIDEAAALVRVLNTEFALERVTVKSPAEV
                     APAVVQALEGRGIHFFLIDAPAEAFKPLAVAVRGRDALLFNVTASDDGLRRDLCVREF
                     VHVIPSLAMRMDALMQYLASRKWRDILVFEGPLPADVETVKAFTRSAQKFGAKIVANQ
                     RFKAGTDPREREQNNPALLSAIRGNYDVVFVADGAFDFVRQVPYHTVLPRPVVGSIDL
                     EPVA"
BASE COUNT          447 a          746 c          743 g          472 t
ORIGIN      
        1 acgccttgtc atgggcgcgg tcggccagcc ctaggcgggc gagctccgct tcgatccgcg
       61 gcttcgctat gctgcgtggg ataccatgga ggccggcatg gaacagaaga ttggaggtca
      121 ccgacagctc caggtcgagc gtcggctgct ggaacacgat gccgagtcgc gctagcgccg
      181 gcaccgcgtc ccgcgtcatg tcgtggccca tcacctcgat acggcctgaa tccggcacga
      241 aaagcccgga tagaagctgg aacaaggttg atttgccggc gccgttagga ccgagcaggg
      301 cgatgaattc gcccggccgt gccaccaagc tgacgccgtt caccgcccgg atcggcccgt
      361 aggtctttac cacgttctcc aataacaggg ctggcgccgt aactacgccg ccggagcgat
      421 cgtccatcag ccggtaacct cccaatgtgc ggcgaatttg cattgcgggc tgcgccgtac
      481 ccacgggctg gcggcttgcc cggccgcttg gataagtcgt acgctgggag caatcgtttt
      541 cgcaagcaaa agaggattgc tcgtgcccat cccacgcctg ttgtcggcgc tgttctgcat
      601 tgcgcttttc gcggtcgcac tttcggcggc atccgccaag gacaccgggc tggtgttcgt
      661 gagcaacgag aagaccaaca atctcatcgt catcgatccc aggaccaaca aggtcgtcaa
      721 ggacctcaaa acatcgcgcc gcccgcgtga catgcatttc aattccgatc acaccaagct
      781 ttatgtcgcc tgcggcgacg acgatgtgat cgacatcatc gatgtcgcca aactggaggt
      841 catcggcaag ctgtcgaccg gctcaagccc agagaccttc ggcatcgacg agtctcgccg
      901 ccgcatctat gtgtccaacg aggaaggctc gtcgctctcc gtgatcgatc tggaccagaa
      961 tattattgtg caagaagtgc cgaccggcgc tgaacccgag ggggtgttcg tcagcgaaga
     1021 cggccatttc atctatgtga cgtccgaggt tggagacctc attcatctca tcgacgccga
     1081 cagcggcaat gtggttcagg acgtggtggt gggcacgagg ccgcgccgct ttgcggccac
     1141 cccggaccgc aaggaactat gggtatcggc cgagttgtcc ggcgaggtct acatcatcga
     1201 ccgcgagaaa ttcaccgtcg aaggcaagat cgagttcctg cccccaggca tgcgcaaaac
     1261 cgatgtgact ccggtcgatc tgcgcatcac cagggacggc aagaccgcgt atgtgacgct
     1321 aggccacgcc gcccacgtcg ccgtggtcga cgtgccgacc cgcaagattc agggctacat
     1381 cctggtcggc aagcgctcct ggggcctcgg catgtcgcgc gatgaaagga cgctctatgt
     1441 cgccaatggc ttcggtgacg atgttactgt catcgatctc aagacccgca aggccaccgt
     1501 ttcgattccg gtcggtcgca tcccctgggg cgtggtgatc gatgattgaa ttttgcatac
     1561 cgcaaagggt gggcacgctt cgctttgccc gccttacgct cgtggtcttc ctcgctctcg
     1621 cggcgcctgc ttttgcgcaa ccggcggcat caccccccac cacgccgcgg caacatattt
     1681 ccatcggata cgtggagatc gagggggatc ctcgttacga gccggtgcgc gcctatgagc
     1741 gtctcattct taaaacccgc gaccatccgt tcgcgggtgc gcagatcggc atcgacgaag
     1801 cggccgcgct ggtgcgtgtg ctcaacaccg agtttgcgct cgaacgcgtc accgtcaaat
     1861 cgccggccga agtggcgccg gcggtggtgc aggcgctgga ggggcgcggc atccattttt
     1921 tcctgatcga cgcgccggcg gaagcattca agccgcttgc ggtcgccgta agggggcgtg
     1981 acgcgctgct gtttaacgtc acggcgtccg atgacggctt gcgtcgcgat ttatgtgtgc
     2041 gtgagttcgt gcatgtgatc ccgagccttg ccatgcgcat ggatgcgctg atgcaatatc
     2101 tcgcgtcacg gaaatggcgc gacattttgg tattcgaagg accgctgccc gccgacgtcg
     2161 agaccgtgaa ggcattcacc cgttcggcgc agaagttcgg cgccaagatc gtggccaatc
     2221 aacgcttcaa ggccggaacc gatccgcgcg agcgcgagca gaacaacccg gcgctgctta
     2281 gtgccatccg gggcaactac gacgtggtct tcgtcgccga tggggcattc gatttcgtcc
     2341 gtcaggtgcc ttatcatacg gtgctgccgc ggccggtggt cggaagcatc gaccttgagc
     2401 cggtggcg
//
LOCUS       DATILV010000657         5577 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4757504, whole genome shotgun sequence.
ACCESSION   DATILV010000657 DATILV010000000
VERSION     DATILV010000657.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5577)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5577)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5577
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4757504"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..387
                     /locus_tag="VLJ17_15615"
     CDS             <1..387
                     /locus_tag="VLJ17_15615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012255508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine--acyl-ACP N-acyltransferase OlsB"
                     /protein_id="HSV24441.1"
                     /translation="IWTYVLEHRIDVMIGCASLDGIDPDRLALPLSFLHHYARAPETW
                     RTVALPRRYIELNRMPKAGVAPKSALQMLPPLIKGYLRLGAFVGDGAVIDRQFGTTDV
                     LIILPVSAIRSRYITHFGPGAERHAA"
     gene            complement(392..1345)
                     /gene="coaA"
                     /locus_tag="VLJ17_15620"
     CDS             complement(392..1345)
                     /gene="coaA"
                     /locus_tag="VLJ17_15620"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004594 - pantothenate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I pantothenate kinase"
                     /protein_id="HSV24442.1"
                     /translation="MEQRTEDHLSPYHVFSRAEWAALREDTPMTLTSDEIMRLRSLHD
                     RLDIAEIEEIYLPLSRLLSLYVAATQRLFRAQQGFLFTEDAKTPYVIGVAGSVAVGKS
                     TTARVLQALLARWPNVPKVDLVTTDGFLYPNIVLERDHLMERKGFPESYDLPALLRFL
                     YDIKAGRRPVRAPVYSHLVYDVMPNHRLEVDRPDILVVEGLNVLQTSRLPRDGKAIPF
                     VSDFFDFSIYLDADEDVLMQWYVERFLALRETAFRDPKSYFRRYAKLSDAEATATATS
                     IWTRINLVNLHENILPTRQRADLILKKQKNHTVQEVALRKL"
     gene            complement(1394..1717)
                     /locus_tag="VLJ17_15625"
     CDS             complement(1394..1717)
                     /locus_tag="VLJ17_15625"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004636 - phosphoribosyl-ATP diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-ATP diphosphatase"
                     /protein_id="HSV24443.1"
                     /translation="MEQFSVYDLERRIGERAAASGEESYTRKLLDRGVAQCAKKLGEE
                     AVELALASVGESRERLIEETADLVYHLLVVLKARDIKLAEVEAVLGARASQSGLAEKA
                     SRKTG"
     gene            complement(1758..2534)
                     /gene="hisF"
                     /locus_tag="VLJ17_15630"
     CDS             complement(1758..2534)
                     /gene="hisF"
                     /locus_tag="VLJ17_15630"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013950271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HSV24444.1"
                     /translation="MLKVRVIPCLDVKDGRVVKGINFVNLRDAGDPVEAAIAYDAAGA
                     DELCFLDITASHEDRGTILDVVRRTAEACFMPLTVGGGVRTVTDIRALLRSGADKVSI
                     NTAAVNRRGFVREAAEKFGDQCVVVAIDARKVSKPGEPDRWEIFTHGGRKPTGIDAVD
                     YAQEVVALGAGEILLTSMDRDGTRLGFDIGLTRAVADAVVVPVIASGGVGSLEHLIAG
                     VRDGHAAAVLAASIFHFGEYTIADAKRYMAAAGLAMRMRT"
     gene            complement(2545..3279)
                     /gene="hisA"
                     /locus_tag="VLJ17_15635"
     CDS             complement(2545..3279)
                     /gene="hisA"
                     /locus_tag="VLJ17_15635"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003949 -
                     1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HSV24445.1"
                     /translation="MILFPAIDLKDGLCVRLEQGDMNRATVFNRDAAAQALGFEAEGF
                     EYLHVVDLDGAFAGRPVNAPAIERILESVPLPVQLGGGFRDMATIATWLEKGVDRVII
                     GTAAVRDPELVKQAARDWPNRIAVGLDARDSRVAVQGWAETSDLSALEIALRFEDAGV
                     AAIIHTDISRDGLLKGLNLDATIALADAVTIPVIASGGLASMDDVHRLLQPRAKRLAG
                     AVAGRALYNGRLNATEALRLIRSARV"
     gene            complement(3323..3973)
                     /gene="hisH"
                     /locus_tag="VLJ17_15640"
     CDS             complement(3323..3973)
                     /gene="hisH"
                     /locus_tag="VLJ17_15640"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018323525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HSV24446.1"
                     /translation="MTVAIIDYGSGNLHSAAKAFERAAHQIGTSQPIEVTSDPAVVRN
                     ADRLVLPGVGAFADCRRGLDEVSGMMAALDEAVRRNARPFLGICVGMQLMADRGREYA
                     VTDGMGWIPGEVCRISPNDPVLKIPHMGWNTLEARRPHPLLDGIPLGPKGLHAYFVHS
                     YHLQVENPADLVAESDYGGSVTALVGRDNYAGTQFHPEKSQRLGLALIANFLRWKP"
     gene            complement(3970..4470)
                     /locus_tag="VLJ17_15645"
     CDS             complement(3970..4470)
                     /locus_tag="VLJ17_15645"
                     /inference="COORDINATES: protein motif:HMM:NF022400.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2628 domain-containing protein"
                     /protein_id="HSV24447.1"
                     /translation="MAAFAVLEPPRRHRGASEHADRFLFLRDRFSLGAFLFGPLWMIW
                     RRLWLALTIYLVIAGLIGYALQIVGIDWTVVTLVFGLIQLLIGLEGTNLVRWSRVRHG
                     WYDHGAVIADDRELAERRFFDSRRAVRPADVSVAASAPTLPPASEVGQSRSDVVGLFP
                     EPGGGL"
     gene            complement(4536..5129)
                     /gene="hisB"
                     /locus_tag="VLJ17_15650"
     CDS             complement(4536..5129)
                     /gene="hisB"
                     /locus_tag="VLJ17_15650"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007604059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004424 - imidazoleglycerol-phosphate
                     dehydratase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HSV24448.1"
                     /translation="MRKGLVKRTTKETDIAVAVDLDGGGVAAVSTGIGFLDHMLDLLA
                     RHSRIDISVKAAGDLHIDHHHTTEDIGIALGQAVKQALGDMKGIARYADVHVPMDEAL
                     TRVAIDVSGRPFLVFRVAFSRDKIGVFDTQLVNEWFQAFAINAGITLHVETLYGANDH
                     HISESCFKGLARALRTAVAIDARTKDEVPSTKGSLGS"
     gene            5302..>5577
                     /locus_tag="VLJ17_15655"
     CDS             5302..>5577
                     /locus_tag="VLJ17_15655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HslU--HslV peptidase proteolytic subunit"
                     /protein_id="HSV24449.1"
                     /translation="MQSQQSDVWHGTTILTVRKAGTVAIGGDGQVSIGQTVVKANAKK
                     VRRLAKGDVIGGFAGATADAFTLFERLEGKLEQYPGQLMRAAVELAKD"
BASE COUNT         1159 a         1743 c         1602 g         1073 t
ORIGIN      
        1 atctggactt acgtgctgga acatcgcatc gacgtcatga tcgggtgcgc gagtctcgat
       61 ggcattgatc cggatcgtct ggcactgcca ctgtcgttcc ttcatcatta tgcgcgcgcc
      121 cccgaaactt ggcgcaccgt agcgctgcca cgccgctata tcgagctcaa ccgtatgcca
      181 aaggcagggg tcgctcccaa gagtgcgctg cagatgctgc cgcccttgat caagggctac
      241 ctgcgacttg gcgcatttgt cggcgatggt gccgttatcg accgccagtt cgggaccacc
      301 gacgtgttga tcatcttgcc ggtgtccgca ataagatcac gttacattac gcatttcggc
      361 ccaggcgccg agcgccatgc ggcgtgacac atcacagctt gcgcagcgcc acttcctgaa
      421 ccgtatgatt tttttgcttc ttgagaatga gatcggcgcg ctggcgcgtc ggtagaatat
      481 tttcgtgtag gttgacgagg ttgatccgcg tccagatcga agtcgcggta gcggtggcct
      541 cggcgtcgct gagctttgca taccggcgaa agtaggattt cgggtcgcga aacgcggttt
      601 cccgcaatgc aagaaaccgc tccacgtacc attgcatcaa tacgtcttcg tcggcgtcga
      661 gatagatcga aaagtcaaaa aaatcggaca cgaatggtat tgccttaccg tctctgggga
      721 ggcggctggt ctgcaagacg ttcaagcctt cgaccacaag aatgtcaggc cgatcgacct
      781 ccagccggtg attgggcatc acgtcataaa ccagatgtga gtagaccggg gcccgcaccg
      841 gtcggcggcc ggccttgatg tcataaagaa agcgcagcag tgcgggcaga tcgtagcttt
      901 ccggaaagcc cttgcgctcc atcagatgat cacgctcgag cactatattg ggatagagga
      961 agccatctgt agtgacgagg tcgactttgg gcacattagg ccatcgcgcc aacagtgctt
     1021 gcaggacgcg cgcggtggtc gatttaccga ccgcgaccga gccggcgacg ccgatgacat
     1081 acggcgtctt ggcgtcctcg gtgaagagga agccctgctg ggcgcgaaac agcctttgag
     1141 ttgcagcgac atagagagac agcagccgag acagcggcag ataaatctcc tctatctctg
     1201 caatgtcgag acgatcatgc agcgagcgca gccgcattat ctcatctgag gtgagcgtca
     1261 tcggcgtgtc ttcgcgcaac gccgcccatt cggcacgcga gaagacgtga tacggtgaaa
     1321 gatggtcctc ggtacgctgc tccatcttaa aaatccgtct gccggggttt gcgggcatta
     1381 gaaccgtgct ggctcaaccg gtcttgcggg aggccttctc cgcaaggccg gattggctgg
     1441 cacgggcgcc caacactgcc tcgacctcgg ccagtttgat atcccgggct ttaagcacca
     1501 ctagcaaatg atagaccaga tcggcggttt cctcgattaa ccgttcgcgg ctctcaccga
     1561 ccgatgcgag agcaagctcg acagcttcct cccccagttt tttggcgcat tgcgccacgc
     1621 cccggtccag caatttacgc gtataggact cctcaccact ggcggccgcg cgctcgccaa
     1681 tgcgacgctc taagtcgtag acggagaatt gttccatagc cctgcccaat accaccttcg
     1741 gccgcaggct gatacagtca tgttctcatg cgcatcgcca atccggccgc cgccatgtac
     1801 cgctttgcgt cagcgatggt gtattcgcca aaatgaaata tggatgccgc caaaaccgcc
     1861 gcggcgtggc cgtcccgcac gccggcgatc aaatgttcga gactgccaac tccacccgac
     1921 gcgatcacgg gcaccaccac ggcatccgcg actgcgcggg tcaagccgat atcgaagccc
     1981 aggcgggtgc cgtcgcgatc catagaggta agcaggattt cgccggcacc cagcgcgacg
     2041 acctcctggg catagtcaac cgcgtcgatc cctgtgggct tgcggccacc atgggtaaaa
     2101 atctcccagc gatccggctc accgggcttt gacacctttc tggcatcgat ggccaccaca
     2161 acacattggt cgccgaactt ttccgccgct tccctgacga atccgcgccg attgacggct
     2221 gccgtgttga tggagacctt gtcggcaccc gaccgtagca gcgcacgaat atcggttacg
     2281 gtgcgcacgc cgccgcccac cgtcaacggc atgaagcacg cctctgcggt ccgtcgcacc
     2341 acatcaagga tggtgccgcg gtcctcgtgg cttgcggtga tgtcgagaaa gcacagctcg
     2401 tcggcgcccg ccgcatcgta cgcgatggca gcttcgaccg gatcgccggc atcgcgcaga
     2461 ttgacaaaat tgatgccctt gaccacacgc ccatccttga catcaaggca gggtatgacg
     2521 cgaaccttga gcacgcgccc ctcattacac ccgagcgctg cggatcaacc gtagcgcctc
     2581 ggtggcgttg agccgtccat tatagagggc gcggcctgca acggcgccgg ctagcctttt
     2641 cgcccgcggc tgcagcaacc gatggacgtc atccatggag gcaaggccgc ctgatgcgat
     2701 taccgggatg gtaacggcat cggccagcgc aatagtagcg tcgaggttga gccccttgag
     2761 gagaccatcg cgggagatat ccgtgtggat gatcgcagcc acgccggcat cctcgaatcg
     2821 tagcgcaatt tcaagtgccg acagatcgga cgtctcggcc caaccttgga cagccacacg
     2881 actgtcgcgt gcgtcaagcc ccacggcaat gcggttcggc cagtcgcgcg cggcctgctt
     2941 gaccagctcc gggtctcgca ccgccgcagt cccgatgata acgcggtcga cgcccttttc
     3001 gagccacgtc gcaatcgttg ccatatcgcg aaagccgcct ccgagttgca ccggcagcgg
     3061 tacgctttca aggattcgct cgatcgcagg ggcattcact gggcgacccg cgaacgcgcc
     3121 gtcgagatcg accacgtgca gatattcgaa cccttcggct tcaaaaccta aggcctgggc
     3181 agccgcgtca cgattgaaca ccgttgcgcg gttcatgtcg ccctgctcca ggcgcacaca
     3241 tagaccgtct ttgagatcaa tggctggaaa caggatcaag gcgcttgccc ttcatcaccc
     3301 attcgaagat gccgcggacg tatcaaggct tccacctgag gaaatttgcg atcaaggcaa
     3361 gtcctagccg ctggctcttt tccggatgga actgcgtacc agcatagtta tcacgtccca
     3421 ccagcgccgt gaccgacccg ccataatcgg attccgcaac taaatcggca gggttctcca
     3481 cctgcaggtg gtaactatgg acgaaatagg catgcaggcc cttggggccc aatggaatgc
     3541 cgtcaagcag gggatgcggc cggcgcgctt cgagcgtatt ccatcccata tgcgggatct
     3601 tcaacaccgg atcgttaggg cttatgcggc agacctctcc agggatccaa cccattccat
     3661 cggttacggc gtattcacgg ccgcggtcgg ccatgagctg catgccgacg cagataccga
     3721 gaaagggcct ggcgttcctg cggaccgcct cgtccaaggc ggccatcatc ccgctcacct
     3781 catcgagccc gcgccggcaa tccgcaaaag cgcccactcc cggcagcaca aggcgatcgg
     3841 catttcgcac caccgccgga tcgcttgtca cctcaatggg ttgcgacgtg ccgatctggt
     3901 gcgccgcgcg ttcaaatgcc ttggcggcgg aatgcagatt ccccgacccg tagtcgatga
     3961 ttgcaacagt cacagcccgc ctccgggctc cggaaacagc ccaacgacgt cggaacgaga
     4021 ttgtccaacc tcacttgctg gcggcagtgt cggcgcagac gccgcgaccg atacgtcggc
     4081 gggacggact gcccgacggc tatcgaaaaa acgccgctcg gccagttcgc gatcgtcggc
     4141 gatcacagca ccatggtcgt accatccatg cctgacgcgg ctccaacgca ccaagttcgt
     4201 accctcaagg ccgatcaaca gctggatgag cccgaaaacc agcgtaacca cggtccagtc
     4261 aatacccacg atttgtaggg catatccgat gagtccggcg atgaccagat agatggtcag
     4321 cgcgagccac agacgccgcc aaatcatcca taaagggccg aaaagaaaag ctcctaggct
     4381 gaaccggtcg cgcaagaaga ggaaccgatc ggcgtgctca ctggcgccgc gatggcgcct
     4441 cggtggttcc aataccgcaa aagctgccat gatttgtcct gtactaacga ttgacaaggc
     4501 gtccgggaaa cggtgccggc ctggaccata tgcagtcagc ttccgagcga gcctttggtc
     4561 gacggcacct cgtccttagt tcgcgcgtca atggcaactg ccgttcgcaa agcccgcgca
     4621 agccccttga agcacgattc cgatatatgg tgatcgtttg ctccgtaaag ggtttcaacg
     4681 tgaagtgtga ttccggcgtt gatggcgaaa gcctgaaacc attcgttgac cagctgcgta
     4741 tcaaagacac caatcttgtc gcgactgaac gccacgcgga acaccaggaa ggggcgcccc
     4801 gatacgtcga tggcgacgcg ggtcaacgcc tcatccattg gcacgtgcac atccgcatag
     4861 cgagcaatgc ccttcatatc gccaagagcc tgctttaccg cttgtccaag agcgatcccg
     4921 atgtcctcgg tggtgtggtg atggtcgata tgcaggtcgc cagcggcctt gacgctgatg
     4981 tcgatccggg agtgccgggc aagcagatca agcatatggt caagaaagcc gattccggtc
     5041 gagaccgcgg caactccgcc gccatcaagg tcgaccgcga ctgcgatgtc ggtttccttc
     5101 gtggtacgct ttaccagccc cttacgcatg ccgtatctcc gggtccaatg ctgggggcgt
     5161 tgtaacaggg gttggtgtat cctgccacta ttggcggcgg gtcacagcca accccaagcc
     5221 gttcggtgcc tctattttgg tcctgatttg cgttggcgcc ggtgagtgca tagatcaggc
     5281 tccagcaatc gagcaaggcc catgcaatcc caacagtccg atgtctggca cggcactacg
     5341 attctcacag tccgtaaggc cggtaccgtg gcaatcggcg gcgacggtca ggtctccatt
     5401 ggccagactg tcgtcaaggc caacgccaag aaggtgcgcc ggcttgccaa aggcgacgta
     5461 atcggcggat tcgctggtgc gacggccgac gctttcacac tattcgaacg cctcgaaggc
     5521 aagctggagc agtatccggg tcaacttatg cgtgccgccg tcgagctcgc caaggac
//
LOCUS       DATILV010000658         1901 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4757590, whole genome shotgun sequence.
ACCESSION   DATILV010000658 DATILV010000000
VERSION     DATILV010000658.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1901)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1901)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1901
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4757590"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..282
                     /locus_tag="VLJ17_15660"
     CDS             <1..282
                     /locus_tag="VLJ17_15660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24450.1"
                     /translation="LSPSIVEECSKPQSWRFLSRRRKFPPIFAVLLRAATVTGDALTK
                     TAHSHADILFKPELQSVDLLDWQAYGRAIEIGYRHAIQKLEQLGTLALS"
     gene            complement(1126..1725)
                     /locus_tag="VLJ17_15665"
     CDS             complement(1126..1725)
                     /locus_tag="VLJ17_15665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018315707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSV24451.1"
                     /translation="MSSEASEIDDRAQRFRDAALPHLDEVYTAARYLLRNANDAEDAV
                     QECYLRALRHFDSFRGPAMKPWLLAILKNVCNSEFMQRRGREVPTDYAQDESAAEAMP
                     MWQEPQASPEKAMEQQDSARIWRLVAELPEPFREAIVLREMNDLSYKEIAQLAGVQIG
                     TVMSRLARARSMLRTAWNLQQNVAYDAAGAAVRLKTGVR"
BASE COUNT          385 a          552 c          514 g          450 t
ORIGIN      
        1 ttgagcccat cgatcgtcga agaatgcagt aagccgcagt cttggcggtt tttgagtcga
       61 cgccgaaaat ttcctcccat tttcgccgtc cttctccgag cggccacggt aaccggagat
      121 gcgctcacaa agacggcgca cagccatgcc gatattctct tcaaaccaga gctccagagt
      181 gtcgatcttt tggattggca agcttatggt cgtgccattg aaatcggcta tcgtcacgcg
      241 atccaaaaat tggaacagct tggcacactt gcactgtctt gattgtgaag catgatgtcc
      301 ggatgcagac gcgactctca gttcggtacc acaagaaaaa tgatctacga catgtttaat
      361 tgctattgct gctgattgct gcggcttcta ccggatcggc attagcgttt tggggcgacg
      421 gcggttgatt gcttgcttcg ggtgagagag gaccgaagcc attttttgat tgccgttagc
      481 gcgcctttat gcggttaaag gccggcatca acttctgctg tggtgtcgta gtcggttgca
      541 aaaaaagcca ctcaaagtac gtcgtggcaa tccgctcttg tcgcggctgt ctcgggcgat
      601 cagccacgaa ggcatcgcgg caactcgttg aacaatagcg ccgcttagtg aaccaaccac
      661 gctgatgagc gacaaggcca ataccgcgga tgcaatcagg atttgaacat ttcatcacac
      721 tctcctcgta cgatttttgc tgctgggtat ctccctgtgg cccctccgtc caaaatacct
      781 ggcatcgctg tagatcaacc gggtcgtacc taggcggact tgtatggccg gccccaagac
      841 gattcgtgca ccaagctaga gaccgtaatt ggtctaggtt tattccccga ggaagtgtga
      901 cgcacaataa cgttagatga ccgacgtagt tgttagataa cactcggcga ttgagcgtcc
      961 gcaaaggaat tcattcgctt tcgtgattgc cgctttcgtg attgcgattg tttgcgcggc
     1021 accgtacctc gagcatttat caatcgaaag ttctgttgga gtgataaaag ttccgccctc
     1081 ggcggcggcg tgaactcccg catgattatc gtgcaaccct gacggttacc gaacgccagt
     1141 cttcagcctg acggccgcac cggctgcatc gtacgcgacg ttctgctgaa gattccatgc
     1201 agtgcgcaac atcgatcgcg cgcgagcaag acgcgacatg accgttccga tctgtacgcc
     1261 ggcgagttgc gcaatttcct tataagaaag atcgttcatc tcgcgcagca cgatggcttc
     1321 gcggaacggc tccggcagct cagccaccag ccgccatatc ctggcgctgt cctgctgctc
     1381 catcgccttt tccggcgaag cttgcggctc ctgccacatc ggcatcgcct cggccgctga
     1441 ctcatcctgc gcgtaatccg ttggcacctc tcttccacgg cgctgcatga attcgctgtt
     1501 gcacacgttc ttcagtatcg cgagcagcca cggtttcatc gccggccctc ggaagctgtc
     1561 gaaatggcgc aaggcgcgca gatagcattc ctgcaccgca tcttcggcgt cgttcgcgtt
     1621 gcgcaggaga tagcgcgcgg ccgtgtagac ctcgtcgaga tggggtaaag cggcgtcgcg
     1681 aaaacgctgt gctctgtcat cgatctcgct cgcttcgctc gacatgcggt cgctcctctg
     1741 ccacgacccg aatgccctct cgtcatccga aggtggaagg cctgccggcg cttgctgccg
     1801 gcacccgtag ttgagcttgc aaccgatcat gggcggtttt gccaagcgat ggatactacg
     1861 ccgcgctggt aacgccacct gtcgtaaacg cgccgcctag t
//
LOCUS       DATILV010000659         7459 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_154104, whole genome shotgun sequence.
ACCESSION   DATILV010000659 DATILV010000000
VERSION     DATILV010000659.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7459
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154104"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..139)
                     /locus_tag="VLJ17_15670"
     CDS             complement(<1..139)
                     /locus_tag="VLJ17_15670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2497 domain-containing protein"
                     /protein_id="HSV24452.1"
                     /translation="MSQPAKAQEPSMEEILASIRRIISDDDAGKPAAAPPPAPAPAVG
                     AK"
     gene            complement(316..1740)
                     /locus_tag="VLJ17_15675"
     CDS             complement(316..1740)
                     /locus_tag="VLJ17_15675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family outer membrane protein"
                     /protein_id="HSV24453.1"
                     /translation="MLRAAVTSGCAVLVICWTAAQTVHADTLNGALTSAYQTNPQLNS
                     QRAVVRATDESVPQALSGYKPTVSATLQTAQQYNSTVAKVPPTPDHPGANYPRLGVES
                     SPSSITATVTQNVFNGFQTANRVRAAETNTSAARESLRVAEQTILLNAATAYMDLLRD
                     SALLELQRRNVEVLQEQLRQTRDRFNVGEVTRTDVAQAESRLAQGRAQVLSAEASYAR
                     SRANYRQFVGVEAGALQPGAPVDRLTPRRLVEAIEIARTRHPSVGVAMFGIDAAVLQV
                     KINEGSLYPQVRLIGQVSQNWEANLSTQLQQFNAFVQGQVSIPIFNAGPAGASDTFSS
                     IRAAKETVGQKRMDLDTARDQVQANVVTAWGQLDAARAQILATQAQVASAEIALNGVR
                     EEARVGQRTTLDVLNSQQELVNARTALVTAQHDRVVASYSLLSAVGELNLPKLGITIP
                     LYDPMVHYQQVRDAWIGVRIPDGR"
     gene            complement(2005..2676)
                     /locus_tag="VLJ17_15680"
     CDS             complement(2005..2676)
                     /locus_tag="VLJ17_15680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018391259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HSV24454.1"
                     /translation="MVDFPEARRAMVDGQVRTNDVTHLGLIAAMLEIPREAFVPEGRA
                     AFAYLDRDVMIADATATEPARYLMKPVVLARLIQAADPSPQDRVLVLGAGSGYGAAVM
                     SRLAGAVVALEQNVSLVQQAGSVLSSLGFRNVAVVRGVLAGGAPASGPYDVILVDGSV
                     GAVPDELRGQLSSRGRLVTVVGPGPIGKATLFQSVNGRFLGRELFDAAAPVLPGFNRA
                     PVFVF"
     gene            2847..3773
                     /locus_tag="VLJ17_15685"
     CDS             2847..3773
                     /locus_tag="VLJ17_15685"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF024758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S1C family serine protease"
                     /protein_id="HSV24455.1"
                     /translation="MTDAISHAPSQIQSLLQFSNQLAAIIAAAAQSVVAVHGGGRRPS
                     SGIVWQPGVVVTAEETVTRDGDLAVTLPDGNRVQAILAGRDPSTDIAVLSYESTSPPT
                     AFASTAFATDLRAGHLAVAIGRTDGGAVATLGIVSFAGAAWRSRLGGQIDARLVIDAR
                     LPAVAEGGAVIGADGSLIGIPVFGPRRRVLAIPAATIARIVPAIRDKGHIARGYLGVG
                     LQRVPLSAADGAETRRGAMVVTLDPVGPAKTAGILQGDIIVGIGGGAVTGLRSLYQQL
                     GPDAVGKSLAIELIRAGARMTVDVTISPRPQA"
     gene            3888..4364
                     /locus_tag="VLJ17_15690"
     CDS             3888..4364
                     /locus_tag="VLJ17_15690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HSV24456.1"
                     /translation="MTDLDAPIEDADVVLADRPVATAVRLIALASHESHKDWPTDIRA
                     VVPTDVDAATLAAVITVVAAGYVLVPHEDVGGGDVDTWADPGDGAEELLIALTARERE
                     VLALLAEGASNKEIASTLAISFHTAKFHVASLTEKLGARSRVDAIAIAIRAGLVMV"
     gene            4430..5431
                     /locus_tag="VLJ17_15695"
     CDS             4430..5431
                     /locus_tag="VLJ17_15695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HSV24457.1"
                     /translation="MLHIDPGFPNNQPPDNDSSAEVTGPLDALSSGIAAVVDRVGPAV
                     VRVEAARSGRRSGGIGSGVVISPDGLVLTNSHVIHGHNEARLADSEGRTLEARLIGED
                     RDTDLALLRVTAARRLTSAVLGDSKLLRRGQLVVAIGNPLGFEFTVTSGVISALGRSL
                     RASNGRLIDDVVQTDAAHNPGNSGGPLVSTRGEVVGVNTAVIAGAQGICFAVASNTAK
                     FVLGELIRHGRVRRAYIGVSAQTVPVPRRYAQEFGLENRFGALVTGIEGHSPAAAAGF
                     ATQDIVVKLGAETVTGVDDLVRLLDGSRVDQAVEVTVLRLGKRLELTVRPIERRSQA"
     gene            5563..5736
                     /locus_tag="VLJ17_15700"
     CDS             5563..5736
                     /locus_tag="VLJ17_15700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24458.1"
                     /translation="MSIATTERTGSIRTAIEFGIKLMTGLLIVSAAFLTLLAIQLAVA
                     TPETEAALQMLLQ"
     gene            6061..7434
                     /gene="mgtE"
                     /locus_tag="VLJ17_15705"
     CDS             6061..7434
                     /gene="mgtE"
                     /locus_tag="VLJ17_15705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019902977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HSV24459.1"
                     /translation="MNETTTDTEETVDPAALAARLAEELPADIAEALNEQIPQVAAAI
                     LQNLPLETAVAVLDTPSLRDAGEIIEAIPRDRVVPMLSGMSADRAADVLLELDEPVRS
                     DLLGRLDAETKASVRQLLIYPEESAGSLMTTEFVSVPATWTVAQTLQHVRMVERTRET
                     VYAIYILDPRSKVLLRALPLRRLISANPEESVLAAAPTRRPVTISPLASRDEAARLIS
                     KYDLLAVPVVDGAGQLVGIVTVDDVIDAIVERQTEEVQRFGGMAAIDEPYWDVGLAHM
                     IRKRAGWLCALFVSEMLTASAMQGFQGELEKAIVLTLFIPLIMSSGGNSGSQATSLLI
                     RALALREVQLTDWWRVALRELPTGIMLGSILGVIGIARITLWQMFGLYDYGSHWILVA
                     ATVGVTLVGIVAFGSMVGSMLPFLLRIVGFDPAVASAPFVATLVDVTGLVIYFGVAAL
                     ILHGTLL"
BASE COUNT         1351 a         2388 c         2295 g         1425 t
ORIGIN      
        1 tctttgctcc cacagcgggc gccggtgccg gcggcggcgc ggctgccggc ttacctgcgt
       61 cgtcgtccga aatgatgcgg cgtatggagg ccaaaatctc ctccatagac ggctcttgag
      121 cctttgcggg ttgagacatc agcactttcc taccgctacc ggctatttac cggccgggtc
      181 ggcgcacgaa tcgtgcgcaa ccgatcgcgt caagtaagag tcccagtatc gcaattgaac
      241 gctcaaatgc aagcaatgcg caaaacttaa gcctaatctg tggcgaattt gcgaatttcc
      301 tgcaggtcag cggtgtcagc gcccgtcggg aatgcgcact ccgatccagg cgtcgcgcac
      361 ctgctgatag tgcaccatcg gatcgtagag tggaatcgtt attccgagct tgggtaaatt
      421 caattcgcca acggcgctca aaaggctgta cgacgccacc acgcgatcgt gctgggcggt
      481 gaccaacgcg gtcctggcat tgaccagctc ctgctgagaa ttaagcacat caagggtggt
      541 gcgctgcccg acacgggctt cctcgcggac gccgttgagg gcgatttctg ccgaggccac
      601 ctgggcctgg gttgccaaaa tctgcgccct cgcggcgtca agctggcccc atgccgtcac
      661 cacgttagcc tggacctgat cacgtgcggt gtcgaggtcc atgcgcttct ggccgacggt
      721 ttccttggcg gcgcgaatcg atgaaaatgt atccgatgct cccgcggggc ccgcattgaa
      781 gatcggaatc gaaacctgtc cctgcacaaa ggcgttgaac tgctgcagct gcgtggagag
      841 gttggcttcc cagttttgcg agacttgacc gattaggcgc acctgcggat agagcgagcc
      901 ctcgttgatc ttgacctgca gcacggcggc atcgatgccg aacatagcga cgccgacgct
      961 tgggtgccgc gtgcgagcga tctcgatcgc ttctaccagc cgccgcggcg tcagacgatc
     1021 gaccggcgcc cctggctgca acgcaccggc ttccacgccg acaaattgcc ggtagttcgc
     1081 acgcgacctg gcatatgaag cttcggcgga caatacctgg gcacgcccct gcgccaagcg
     1141 ggattccgct tgcgccacgt cggtgcgcgt cacttcaccg acgttgaagc gatcgcgggt
     1201 ttggcgcaac tgttcttgga gcacttccac attgcgacgc tgcaattcaa gcaatgcgct
     1261 gtcgcgtagt aggtccatat acgcggtggc ggcattcagc aaaatggtct gctcggccac
     1321 gcgcaggctc tcgcgcgccg ccgatgtgtt ggtttcggcc gcgcggaccc ggttcgcagt
     1381 ttgaaatcca ttgaagacgt tttgggtgac agtcgcagtg atgctgctcg gcgaagattc
     1441 gacgcctagg cgcggatagt tggccccagg gtggtctggg gtggggggga ctttcgccac
     1501 cgtgctgtta tactgttgcg cggtttgtag ggtagccgac acggtcggct tgtagccgga
     1561 aagtgcctgc ggcacggatt cgtcggtcgc ccgtacgacc gcgcgctggg agttgagctg
     1621 cggattggtc tgatacgcgc tggtcagcgc gccgttaagc gtatccgcgt gcaccgtctg
     1681 ggccgcagtc cagcagatca ccagcactgc gcaacccgag gtcaccgccg cccgtaacat
     1741 cccacccccc acgcaacctc gtaaggtcaa ttgcgccccg accgccgccg cgtaccaagc
     1801 ccaccccgaa cgctacagaa agctaaccat aggaaggtta accgcaggaa ccataagcga
     1861 cttgcctccg cggcaaaacc ctactcgcgc acctcactgg aaaactcaca attgggtcaa
     1921 caatggggtc aaccatttgg ggtatatggc gcccgtgagg ctacccaagc acactgggac
     1981 acaaaatcgt aaaagccaac gggatcaaaa aacgaacacc ggcgccctgt tgaagccggg
     2041 caacactgga gcggctgcat cgaacagctc ccggcccagg aatctcccgt taacggattg
     2101 aaatagcgtg gcctttccaa tcggaccggg gcccacaacg gtgaccagcc ggccccgtga
     2161 cgacaattgt ccgcgcagct cgtccggtac ggctcccacg ctgccgtcga ccaagatcac
     2221 gtcatatgga cccgacgcgg gcgccccgcc tgcaagcacg ccgcggacca ccgcaacatt
     2281 gcggaagcca agcgaagaaa gtaccgaccc ggcctgttgc acaagtgaca cattctgttc
     2341 gagcgcaacc accgcgcccg ctagtcgtga catcactgcc gccccatagc cgctgccggc
     2401 gccgagcacc aacacacgat cctgcggact tggatcggcc gcctggatca gccgcgccaa
     2461 caccacgggc ttcatcagat agcgcgccgg ttccgttgcg gtggcatcgg caatcatcac
     2521 atcgcgatcc agatatgcaa aggccgcccg accttccggc acgaaggctt cacgcgggat
     2581 ttccagcatc gcggcgatga gcccaagatg ggtgacatcg ttggtgcgca cttggccgtc
     2641 caccatcgcg cggcgcgctt ccggaaaatc caccatctcg gcctcctgca aatcgtctct
     2701 caaaatccga gccgccgccg gattgcgacc gcgttttgcg gcaaggtccg cgaaaacgca
     2761 aggcacccgg cctttgtcac ctagccatcc ggtcagttgt tagcagccgg gaacgatccc
     2821 acctacggca cacaacggag gcaattatga cagacgccat ttcgcatgct ccatcccaga
     2881 tccaatctct cctgcagttt tccaaccaac ttgccgcgat aatcgccgcg gcggcacaat
     2941 cggtcgtcgc agtgcacggc ggcggtcgcc gaccatcgag cggcatcgtc tggcaacccg
     3001 gcgtcgtggt aacggccgaa gaaacggtta cacgcgatgg cgatcttgcc gtcacgttgc
     3061 cggatggcaa ccgcgtgcaa gccatccttg ccggacgtga cccctcgacc gatatcgcgg
     3121 tgctcagcta cgaatcgaca tcaccaccta cagcattcgc atcgaccgca ttcgccacgg
     3181 acctgcgggc cggccatctt gctgtcgcaa tcggccgcac ggacggcggc gcagttgcaa
     3241 ctttgggcat cgtgtcgttc gcgggcgctg cctggcgcag ccgccttggc gggcagatcg
     3301 atgcgaggct tgtgatcgat gcgcgcctgc cggcagtcgc ggaaggtggt gcagtgattg
     3361 gtgccgacgg tagcctgatc ggcatcccag tgttcgggcc gcggcggcgc gtgctcgcga
     3421 tcccggccgc caccatcgcc cgcatcgtac cggccatccg cgacaagggc cacatcgccc
     3481 gcggctatct cggggtcggg ctgcagcgcg tccccctctc agccgccgac ggtgccgaaa
     3541 cgcggcgcgg cgccatggtg gtcacgctcg atccagtggg tccggccaag accgccggca
     3601 ttcttcaggg tgacatcatc gtaggaatcg gcggcggcgc cgtgactggg ctgcgcagcc
     3661 tctaccaaca gctcgggccc gacgccgtcg ggaaaagttt ggcgatcgaa ctcattaggg
     3721 ccggagcccg catgaccgtc gatgtcacga tatcaccacg tccacaggcc tgacccgtga
     3781 cattgcggcc acgacgccga acgcggcgga ttcgcgttgc gctttgtatc gcggatcacg
     3841 cccttcgcgc ggacatcgcc gacgcctgca aagacgccga catcgcggtg acggatcttg
     3901 acgcgccgat cgaggatgcc gatgtggtgc tggccgatcg gccggttgcg actgctgttc
     3961 ggctgattgc gcttgcgtcg cacgagtccc acaaagactg gccgacggat attcgcgcag
     4021 tcgtgccgac ggacgtagat gccgcaacgc ttgcggccgt cattacggtc gtcgccgccg
     4081 gctatgtgtt ggtgcctcac gaggacgtcg gcggcggaga cgtcgacacc tgggccgatc
     4141 ctggcgatgg agccgaggaa ttgctcatcg ccctgaccgc acgggaacgc gaggtgctgg
     4201 cgctgcttgc cgagggggcg tccaacaagg agattgccag caccctcgcg atatcgttcc
     4261 ataccgccaa atttcatgtg gcctcgctca ccgaaaagct cggagcccgc agtcgcgtcg
     4321 acgctatcgc gattgcaatc cgcgctggcc tcgtaatggt gtaacccagc gatctgatgt
     4381 cggtttgaaa aatcttccgc tgatcccata tagggtttcg gtgatcccca tgctccatat
     4441 cgatcctggt tttccaaaca atcagccccc cgacaacgac tcgtcggccg aagtgactgg
     4501 gccgcttgat gcgctatcaa gcggcatcgc ggctgtagtc gatcgcgtcg gcccggcggt
     4561 ggtgcgcgtc gaggcggccc gtagcggtcg gcgatctggc ggcatcggtt ccggcgtcgt
     4621 catatcgccg gacggcctcg tgctgaccaa tagccacgtg atccacggcc ataatgaggc
     4681 ccgtctcgcc gacagcgagg gtcgcaccct ggaagctcgg ctgatcggcg aagaccgcga
     4741 taccgatctc gcgctcctgc gggtaacggc ggcgcgcagg cttacgtccg ccgtgcttgg
     4801 cgattcgaaa ctcttgcgcc gcggccaact cgtggtagcc atcggcaacc cgctggggtt
     4861 cgaattcacc gtcacgtcgg gcgtgatttc ggcgctcggt cgttcgctgc gcgcttccaa
     4921 cgggcgcctg atcgacgacg tggtgcagac cgacgccgcc cacaatcccg gcaattccgg
     4981 cggtccgctg gtgtcgacgc ggggcgaggt ggtcggcgtc aatacagccg tgattgcggg
     5041 cgcccagggc atatgtttcg ccgtcgccag caacacggcg aagttcgtgc tgggagaact
     5101 tatccgccac ggccgggtgc ggcgcgccta tatcggggta tcggcccaga ctgtgccggt
     5161 gccgcgccgc tatgcacagg aatttggcct ggaaaaccgg tttggcgcac tggtgacagg
     5221 aatcgaaggg cacagcccgg ccgcggcagc gggtttcgcc acccaggata tcgtggtcaa
     5281 gctcggcgca gagaccgtca ccggggtcga cgatcttgtg cgcctgctcg acggcagccg
     5341 ggtcgatcag gctgtcgagg tgacggtgct gcgattgggt aagcggttgg agctgacggt
     5401 gcggccgatc gagcgccgct cccaggcctg acgggtccac ccaccgccga ttgtcagccg
     5461 aaatatcgct tgcggtttga accaaatccc tttcaacaag cactgggtaa gaaccgcgta
     5521 ggccgaggca cacgcctcgg cctaatacag gggagatttc cagtgtcgat agccaccacg
     5581 gaacgcaccg gcagcattcg gaccgcgatt gaattcggca tcaagttgat gaccgggctt
     5641 ttaattgtca gtgcggcctt cttgaccttg cttgcgatcc aattggcggt tgcgacaccg
     5701 gaaactgaag ccgccttgca aatgctcctg caatgatcaa tttcgttgcc acactcaatc
     5761 gcttcgcccc ggtcgataga gccagtcgct gatcgcgaac ccgcccccgc attgttgatc
     5821 ggtaaccgaa cgcctgcgcc taaccggagg ctatgtcgtc gcgcgtgggc tggtcagcgc
     5881 cgcttcctgc atttattttt tcccgacgct tttctgtctt tccttgctgc ccggccaaca
     5941 ctaaacccgt cctgactttt ttcgacgtcg atgcgcgttc cgctttttac aacgggcgcg
     6001 gcggcgtatt tgatgcggcc aattcgcgaa ggtgcgccaa cgaccaccct gaggtgagcg
     6061 atgaacgaaa ccaccaccga caccgaagag acggtcgatc cggctgccct ggcggcccgg
     6121 cttgcggagg agttgcccgc cgatattgcg gaggcgctta atgaacaaat cccgcaagtt
     6181 gccgcagcca ttctccagaa cctgccactg gagacggcag tcgcggtgct tgatacgccg
     6241 agcctgcggg acgcgggcga gatcatcgag gcgattccgc gcgatcgcgt ggtgccgatg
     6301 ctgtccggca tgtcggccga ccgggcggcc gacgtgctcc ttgagctcga cgagccggtc
     6361 cgctcagacc tgctgggtcg cctcgacgcc gagacgaagg catcggttcg acagcttctg
     6421 atatatccgg aagaaagcgc cgggtcgctg atgaccaccg aattcgtcag cgtgccggcg
     6481 acctggaccg tcgcacagac cttgcagcac gtccgcatgg tcgagcggac ccgcgaaacc
     6541 gtttacgcca tctatattct ggatccacgc tctaaggtgt tgttgcgggc actgccgctg
     6601 cgccggttga tttcggccaa tccggaggaa tcggttctgg cggcggcgcc gacgcgacgt
     6661 ccggtcacca tatcaccgct tgccagccgc gatgaggcgg cgcgcctgat ctcgaaatat
     6721 gacctgctgg ccgtcccggt cgtcgacgga gccggccaac tggtcggcat cgtcacggtg
     6781 gatgacgtca tcgacgcgat tgtagagcga cagaccgaag aggtgcagcg gtttggcggc
     6841 atggcagcga tcgacgagcc ttactgggat gtcggccttg cccacatgat ccgcaagcgg
     6901 gccggctggc tgtgcgcgct gttcgtctcg gaaatgctga cagcatccgc catgcagggc
     6961 tttcaaggcg aactcgagaa ggcgatcgtc ctcaccctgt tcattccctt gatcatgagc
     7021 tcgggcggca attccggatc tcaggcaact tcgcttctca tccgcgccct tgcgcttcgc
     7081 gaggtacagc tcaccgattg gtggcgcgtg gcgctgcgtg aattgcccac aggaatcatg
     7141 ctgggcagca ttttgggagt tatcggcatc gcccgcatta cgctgtggca gatgttcggg
     7201 ctttacgatt acggttccca ctggatactg gtcgccgcga cggtcggcgt cacgctggtc
     7261 ggcatcgtcg ccttcggctc catggtcggg tcgatgctgc cgttcctgtt gcgcatcgtc
     7321 ggcttcgacc cggcggtggc gtcggctccg ttcgtcgcca ccttggtcga cgtcaccgga
     7381 ctggtcattt atttcggggt cgcggcgctc atcttgcacg gcacgctatt gtgagattgg
     7441 gcgcgggttt tgttcttac
//
LOCUS       DATILV010000660         3573 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_410824, whole genome shotgun sequence.
ACCESSION   DATILV010000660 DATILV010000000
VERSION     DATILV010000660.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3573
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_410824"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            600..845
                     /locus_tag="VLJ17_15710"
     CDS             600..845
                     /locus_tag="VLJ17_15710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24460.1"
                     /translation="MRLLTWSAASAVLATVTLALSAEAASARVYRHYVPSYGSWPYWQ
                     GEPTDRLPIWRYGHYQGNDPDNFIRSQLMRDPQTSAK"
     gene            1678..1809
                     /locus_tag="VLJ17_15715"
     CDS             1678..1809
                     /locus_tag="VLJ17_15715"
                     /inference="COORDINATES: protein motif:HMM:NF017758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF892 family protein"
                     /protein_id="HSV24461.1"
                     /translation="MDDALLAAARAVERYEFTRYGSLIAPPKQLGRSSDCVCSLENT"
     gene            2030..2254
                     /locus_tag="VLJ17_15720"
     CDS             2030..2254
                     /locus_tag="VLJ17_15720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24462.1"
                     /translation="MRTTKWIAVLGLIGAASALAVPTSASAQVYFDGPGFGFGFGAPY
                     YGHRYYRYDNTPYYGYYPYRHWRHRHWYRY"
     gene            complement(2994..>3573)
                     /locus_tag="VLJ17_15725"
     CDS             complement(2994..>3573)
                     /locus_tag="VLJ17_15725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24463.1"
                     /translation="QDADLGGTNPIPLIAPSSNSRRALMLALGKDGRGYLLDQNNLGG
                     IGGSLAAATVSRRPIRTAPATYAVGADIHVALQGAGAHCPSAVAENQLTVLKIEASER
                     PNFSTAWCGSLSGAGSPIVTTTDGHADPIVWVVGAEGDNRLHGFRGDTGEPIFPERSG
                     LVMNGLHRFQTLIATKDRLYVGADGRVYSFAF"
BASE COUNT          791 a         1011 c          984 g          787 t
ORIGIN      
        1 acgatgagaa gatacgagtt cgcccttttc tcggcagtgc agcgtccgcg gggcgcaagc
       61 gtgacggaaa ggactgatct tttcgctggg actgccgtac gcttttatcg gctcaacggg
      121 ataggctgaa cggccgcagt cggtgccata acacactacg gtccgcgccc gcagcgcaac
      181 cgggtaggtc gcaggggcag ccggttacta gcgcgggctt gcagcccacg gtgtacgctc
      241 gacctgcccg ccttccgtgc tccgggcccg tcccggtggc aaatccgaga ttacgcccct
      301 cgaacttgcc accggattaa agagagcccg cacacgtcat accggttacc aatacgtccg
      361 actgtgagtt cccgaaaggg acagcctgta acgctcaacg attattcgag tacataagca
      421 ttcatcatgc ctgcatatac ggagacgaca aatgacgtgc gtgtcggacg cgcgtctttt
      481 tccttggccg gactgaatta tttgccggaa ttcggaggtt cgccaaggaa tgcacgcttg
      541 cgcatagccc ctcgcgttac catgtagctc tcgcgcgggt acaagactag gagatgttta
      601 tgcggttact aacttggtcc gcggccagtg ccgtattggc tacggtgacc cttgcactat
      661 cggccgaagc agcctctgcc cgcgtgtacc ggcattatgt gccaagttat ggcagctggc
      721 cttactggca aggcgagccg acggatcgtc ttccgatctg gcgatacggt cattatcaag
      781 gcaatgatcc agacaacttt attcgttccc agttgatgcg ggatccgcag acctccgcca
      841 aatgacctat ccgaagaacc ggactgccgc cgcatttgct gtgcggtctc gcacctcgtc
      901 tctgcgacga ggtgcgaatg gtccgcttaa gctttaaaaa cgtgaatttt tcaacgcttt
      961 gctatcgcgg caattttcat ttcagataaa atcgcgacat tcgcgtttga cgatctcatc
     1021 actcttcatt tctaaccagc gttatatgat aatagcacat caacttgttt tgaaagatac
     1081 tcgcctcaaa tctgagactg tggagggctg ttgaaataca gcccgccaca tatctcatcg
     1141 cagaccgaag aagataagaa gcaacaggta gctcagaggc ggaagcgctc gagcggccag
     1201 ctatcagcat ccaaccggtc gggacaaagc cgctatcacg ctcgaaaaat tcaagcacat
     1261 cgcggacgtt ccgctatttt gaggcaaatc ctgcgaaatc cctaaaaaaa gccaattcgg
     1321 ctaaggtccc aattcggcta aggtcaccgc gcgacccacc attcgcaagc tccccgatca
     1381 tgctaaggcc gccggcccgc agggcctgcc cgaagatgca tcacgcaact ttgttcgatt
     1441 cgtcatgtca acgaagaaac gaatgcgttc tccatgggtt cctacactta accaccgcgt
     1501 atctgatttt tggtttttgg tcgcaatcca gctttgcaag ttgcaggaga gctttcatga
     1561 cgattcttct ttggtatttt ccgtactatt tatcattttt accgccacat ccgaaatgac
     1621 gctatcgcgc tggcatgcac gtgaaagcgg aagctccgga ggaccaataa ggcaaacttg
     1681 gatgatgccc tcttagccgc agcgcgagcc gtcgaacgct acgagtttac tcggtatggc
     1741 agtctgatcg ctccgccaaa gcagctgggt cgcagcagcg attgtgtctg ttccctggaa
     1801 aacacctgag gaggaaaagg cagccgatca agcacttacg acgattgcat ttggccaatg
     1861 tgaacctcac ggccgtctaa tcgctgattt caggtcgccc ttgcggtgcg gcccttcgtt
     1921 gcggctgcaa gttccccgga acggtaccac ggcagttgcg ttattcaaat actgaagctt
     1981 ctcggttggg aagatcaatg gtgaagacga gacaagaagg agaacaacaa tgcgaacaac
     2041 aaagtggatt gcagtgctgg gtttgatcgg cgccgccagc gctctggctg ttccaaccag
     2101 cgcatcagct caagtatatt ttgatggccc aggcttcggc tttgggttcg gggcgccgta
     2161 ctacgggcat aggtactatc gatacgataa cacaccttac tacgggtatt atccgtaccg
     2221 gcactggcgt caccggcact ggtatcggta ttgaggtggc gcaagagtgt aacagtcaaa
     2281 aggcacgacc ggagctgacc gtgctctcca atgcatcccc tgcttcgcgg tggcaaaatt
     2341 gaagtaccag cgccgcgagg cagggggctg ctctgatctc gtttgcagga aagtgtctac
     2401 gcgacgctcg cgtccacttt ttacgaacgc tgctcaatcg gcatctgcct cgcgatgcgt
     2461 gccctggtgg ggttgaaagc gctgttgatc aatgccgcat gggagaacac ctgggggaaa
     2521 gaacgcccgg gggaattgcc gacgactcgc cgttgtagag gacttcgctg agcagcccaa
     2581 cgtcgttgca gagagctaat aggcgcttgg cgcccgttga tgttcgtcgg gcatctatcg
     2641 gtttgctcgc cgccgcgctc tggtcggagt cgctaacaat acgttctttt cacgccattc
     2701 gcgattttgg ccaaaccacc atcaataaga tcaataagga tgcatgcaat gtgcatttcg
     2761 acgatacaag ctcgggcgac catcttttaa ggcagccagg aaagccgccg gccgtcgtgg
     2821 cgaatgttcc ggaacgacag gcgtgacggg cataatgtgc gcctcgttct gctgttcggg
     2881 attgccgggg tagtcattac atttgcggtc attttgattg gccatcgcga tgcggggccc
     2941 gttacctgcg taaatccatc gcggggccgc caaaaccgtg ccgacatcgc ggtctagaat
     3001 gcgaaggaat acacgcgtcc atcggcgccc acgtacagac ggtccttcgt tgcgatcaac
     3061 gtctggaaac gatgaagccc gttcatgacg agccccgaac gctcaggaaa aattggctca
     3121 ccagtgtctc ctcggaatcc atgtaatcgg ttgtcaccct cggctccgac gacccaaacg
     3181 atgggatcgg catgtccatc cgtggtagta acgatcggag agcccgcccc gctgaggctg
     3241 ccacaccacg ctgtgctgaa attgggtcgc tcgcttgctt cgatcttcaa gacggtgagc
     3301 tgattctccg ccaccgctga cgggcaatga gcaccagcac cttgcagggc gacatgtatg
     3361 tccgcaccga ccgcataggt cgccggtgca gttcggatcg gccgccgcga gacggttgcc
     3421 gccgcaagac tgccgccaat gccgccgaga ttgttctgat caagcaggta gcctcgcccg
     3481 tccttgccga gcgcgagcat cagagcgcgt cgactgttcg aagaaggggc gatcagcggt
     3541 attggattgg taccgccgag atcagcatcc tgc
//
LOCUS       DATILV010000661         3562 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_5011076, whole genome shotgun sequence.
ACCESSION   DATILV010000661 DATILV010000000
VERSION     DATILV010000661.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3562)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3562)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3562
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5011076"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            268..579
                     /locus_tag="VLJ17_15730"
     CDS             268..579
                     /locus_tag="VLJ17_15730"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025082.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 92 protein"
                     /protein_id="HSV24464.1"
                     /translation="MTNGIRFHAAVGVTQFYLYDNGSRDHAYEVLRPLIDRGVVTLQH
                     WLGKASQPSAYRDCLAPRWKAARRIAFIDVGEFLFLPHHATSGPLWNGIRMFLHYSFT
                     A"
     gene            1054..1941
                     /locus_tag="VLJ17_15735"
     CDS             1054..1941
                     /locus_tag="VLJ17_15735"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013830.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 92 protein"
                     /protein_id="HSV24465.1"
                     /translation="MNWLGRARASLRRVLRAPVHAVLRLCEPYRAARTKHELAICAIF
                     REEAPFLNEWISFHIGVGVTHFYLYNNFSTDNFREVLASWLERGCVTVTEWPEPVGQV
                     SAYQHCVRRVRGDCRWLAFIDVDEFLFSPSAVDIREILACYSDLPAVEVWQLFFGSGG
                     HVSRPALAVTESYLMRAPLTRNSVKSIVNPRMIYKPGVHQCKYWTGEGLDTARRRVTR
                     ERTMPVLDLLRINHYWSRSLQDLETKIARGDASTPQPRDRDSHLDFERALNAERDEAI
                     LPIARAIRNTPVLPAAHSQ"
     gene            complement(2168..3295)
                     /locus_tag="VLJ17_15740"
     CDS             complement(2168..3295)
                     /locus_tag="VLJ17_15740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HSV24466.1"
                     /translation="MTPAKHINPLTARIIEIGCHAIMKSAFPDHVRLLWTYHKMSEPL
                     SVYEPFSLRAALQVWQQMRAGQIDLIVVWVSPYAPWNFRQLKAVIGRPFQPWKSLIRI
                     FGIQALRFVRTETPILAIDNEDARTIAAHNLFLLDKAKYFFKRELPIDRWQVFQHTAH
                     AGLPGARFRSNPKNRIRVEKLRPISIGVTPHEPVPEQMPVPEKSVDVFVAMTLEGGTT
                     VRNEGIEQIRKLAASGLILDIVEGRIEHSEYMERMARAWLTWSPEGLGWECFRHYEAP
                     LVYSIPVINSPTIVRYAPLQDGVHAIYYQADEHCSLGDKIISALADKERLRRIAQTAR
                     SHVLKFHVRPRPLANALLRIGLGLDEPPSGVELSPIKSLDN"
BASE COUNT          720 a         1010 c         1037 g          795 t
ORIGIN      
        1 ggccgattgc atgcgatcgc ttggccacgg accgcgaatg gctgatcaaa acggacctcg
       61 gccggcgaaa cggtgttgat aaatggtggt tggccatgct gaaatccgct atgggtgctc
      121 ttcgcgggca tacgattatg cgtggcgcaa agacactgct tcgctcccct cacgcgctgc
      181 gcgctatcca gcgcgacaag ttttaccgcc aacacgcccc gcatgccttg gccgtctgcg
      241 cgatcttcaa ggatgaggca aagtttcttg acgaatggaa tcagattcca tgccgccgtc
      301 ggcgtcacgc aattctatct ctacgacaat ggcagtcgag atcacgcata cgaggtgctg
      361 cgtccgctca tagaccgcgg ggtcgtcact ctgcagcact ggctgggaaa ggcgagtcag
      421 cccagcgcgt atcgcgactg cctggcgccg cgctggaagg ccgcccgtcg gattgcgttt
      481 atcgacgttg gcgagttctt atttttacca caccatgcga catcaggccc actctggaat
      541 ggcattcgga tgttcctgca ctattcgttc acggcatgaa ttttggatcg agcggacatc
      601 gggtgcatcc gctggggcct ctggtcgaag cctatgcacg ttgcgcctcg cccgaacact
      661 cgcaatcagg aaaatccatc gtcaattcgc gcctcgttcg cggtgtgtcg caatctcaca
      721 tctttccgct atggtgcggt attatgcaaa acaccgatcg aggcatgatt tcgcaggttc
      781 cggttgggcc caagctaaac cgaactttcg cgtcgcttca gctcaatcac tattggtccc
      841 gctcgatccg ggatcttggc gacaaagtgc ggcttggcgg tttatggtac cgaactcgat
      901 ttcgagcggc acatgcaaat cgagcaaacc atgaaaccgc caatgcctca ataattccga
      961 tttggcgagc aattgcccgc taattccgca tgttgaaact ttcgtattta gcacggtaat
     1021 cagcaatcgg gggctgaggg gagggagtgg aatttgaact ggcttggccg agcaagggct
     1081 tcactgcgtc gagtgctgcg cgctccagtt cacgcggtac ttcgattgtg tgagccctat
     1141 cgggcggccc ggaccaaaca cgagctcgcg atttgcgcaa tctttcgtga ggaggcgcct
     1201 ttcctcaacg aatggatatc attccacatc ggtgtcggcg tgacgcattt ctacctctac
     1261 aacaatttct ctaccgacaa tttcagggag gtattggctt catggctcga acgcgggtgc
     1321 gttaccgtga cggagtggcc ggaaccagtc ggacaggttt ccgcctacca gcattgcgtg
     1381 aggcgggtgc ggggcgattg caggtggctt gcgttcatcg acgtcgacga gttcctgttt
     1441 tcaccgtcgg ccgtggacat acgcgagata ttggcgtgct attctgacct gcccgcggtt
     1501 gaagtgtggc agctgttttt tggttcgggc ggacacgtgt ctcggccggc gctcgcggtt
     1561 acggaaagct atttgatgcg agcgccgctg acacgcaatt cggtgaaaag catcgtcaac
     1621 ccgcgcatga tctacaagcc aggtgtgcac caatgcaaat actggaccgg cgaaggtctc
     1681 gacactgcgc gtcgacgtgt cacccgggag cgcacaatgc cagttttaga tcttctgcgc
     1741 atcaatcact attggtcgcg ctcgctgcag gatctcgaga ccaagatcgc ccgcggcgat
     1801 gcctcgacgc ctcagccccg cgatcgtgac tcgcatttag atttcgaaag ggcgctgaat
     1861 gccgagcggg acgaggccat cctgccaatc gcacgggcca tccgcaacac acctgtgttg
     1921 cctgccgcac attcgcagtg acgatgcaat ggaaatcgcg cggcccgggt tccgttcggg
     1981 ggacggcaac aagccttcga ccggaatacc aggcgcggcc ttcagaccaa cgtcccttgc
     2041 cctctaccgc gcagacattg ggagggcgtc tcaaatgctt ggctttttcc ggctgcgcag
     2101 cggcgcaaca gggtacgccg acgcgatcaa gcaagatccg ccttcgacga aacgcgggtc
     2161 tcgaaattca gttgtccaga cttttgatcg gcgacaactc cacgccggaa ggcggctcgt
     2221 cgagtcctag tcctattcgc aaaagcgcat tagccagcgg ccgcggccgc acatgaaatt
     2281 tcaacacatg cgatcgtgcc gtctgtgcaa tccgtcgcaa acgttccttg tcggcaagcg
     2341 ctgatatgat cttatcgccg agactgcagt gctcgtcggc ctgatagtaa atggcgtgaa
     2401 caccgtcttg cagcggcgcg tagcggacga tcgtcgggct gttgatgacc ggtatgctgt
     2461 agacgagcgg cgcctcgtag tgacggaagc actcccagcc gagaccctct ggtgaccaag
     2521 tgagccacgc gcgcgccatc cgttccatat attcggaatg ctcgatgcgg ccttcaacga
     2581 tgtccaagat caggccgctg gccgccaatt ttcggatctg ttcgatgccc tcgtttcgga
     2641 cagtcgttcc gccttcgagc gtcattgcca cgaatacgtc gacagacttt tccgggaccg
     2701 gcatctgttc cgggaccggt tcgtgcggag tcacaccaat ggagattggg cggagctttt
     2761 ccacgcgtat gcggttcttc ggattggatc ggaatctcgc tcccggaagg ccggcatggg
     2821 ccgtgtgctg gaatacctgc cagcgatcga tcggcagctc tcgcttaaag aaatattttg
     2881 ctttgtccaa caggaacagg ttgtgagcgg cgatcgtgcg agcatcttcg ttgtcgattg
     2941 ccaggatggg cgtctcggtc cgtacaaagc ggagcgcctg tatcccaaag atgcgaatga
     3001 gcgatttcca gggctgaaac ggacggccaa tgaccgcctt caactgtcga aaattccatg
     3061 gtgcgtaggg gctaacccaa accacgatca ggtcgatttg accggcgcgc atctgctgcc
     3121 atacctgcag ggccgcacgc agagaaaatg gctcatagac gctcagaggc tcgctcatct
     3181 tgtggtaggt ccacaacaga cgcacgtggt cgggaaatgc cgacttcatg attgcgtggc
     3241 atccaatctc gatgatgcgt gcggtgagcg ggttgatgtg ctttgccggc gtcatcgatg
     3301 tctagggtaa gctcttcaga agcgcttgat atccgtgccg aattgcccgc aggatgtaac
     3361 cgaatgaggt gccggagcaa gactgcgcgg gttgtttctc gcaaggtcgc gcctcgcttt
     3421 aacaaattag tctaaacaac gccagttggg ccaattcgtc tctcaatctt ttgcaagatc
     3481 gtattgcgca tcattgtcga gtcgtgcaga aacgggtttg tgcgggcgag caatggcgcg
     3541 agcttttccg gtcgcgtcgg cg
//
LOCUS       DATILV010000662         7176 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1178194, whole genome shotgun sequence.
ACCESSION   DATILV010000662 DATILV010000000
VERSION     DATILV010000662.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7176)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7176)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7176
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1178194"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            311..982
                     /locus_tag="VLJ17_15745"
     CDS             311..982
                     /locus_tag="VLJ17_15745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008596362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HSV24467.1"
                     /translation="MAPRSKLLPKVMIAITTLGGAASSQPSPQRELLQAAEHGEIATM
                     KRLIAAGALLDPVDRRRQTPLLIAVEKGQYEAAALLIQARADINAQAENMDTPWLLAG
                     ALGRTEMLRLMIPKGPDLSLRNRFGGNALIPACERGHVDTVKVLLTTKIDVNHVNNLG
                     WTCLLEAVILGNGGPRYRDVTKLVLAAGANPNIADRGGVSPFTHAMRKGQDEVANLIK
                     AAGGR"
     gene            complement(1646..4447)
                     /locus_tag="VLJ17_15750"
     CDS             complement(1646..4447)
                     /locus_tag="VLJ17_15750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012029753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="di-heme-cytochrome C peroxidase"
                     /protein_id="HSV24468.1"
                     /translation="MPDPQADSSAGAGQQIPVSPNNPCPFLRGLVAGGYVGAHMVPLP
                     KLTGTIEAATGEKGLKERVAGIEIYLVALIANGLSPLRLLKSWWSGAVLDELRNGPLD
                     KHGAGSRILNVDGQVDESEIERLAGFGSDYTAPGGGTERGLNSKQIATYMDANFTRAK
                     GHRRPIDRLLMDGEWPVLLSILGKGEDDYRYLSVAEVRTLFVDRRFPQRIVRRLAHPL
                     PTPSRAVTIVKSAASLLAALAMALVLAITQFPDQLRAILAATPGQLPATLSQLLPPPL
                     PDPLPIKAARWLDQNWSMEDRHWFHHVSQGTKTFPVPYAWFVALEQPRIYVFSRPGLL
                     SDSNYLECFGFIPSPKTVHTDKATLLRYGYADSTDAPASTPSLTGKWQVENFDGLPVG
                     FARLIGATDPGTGAAQPDMVGLTCAACHSGSIHYKGTSIRYDGGPAMVNLLKLEQVTG
                     LSIAYTLVVPGRFNRFATRVLGPGATETQRTELKKGLLDAAAFVKTQAATLANLYNRV
                     HSQDTEEGYGRLDALNRIGNQVFYTDLVASGLTVSEENVHLRDAPVSFPPIWTVPWFH
                     WAQYDASIEQPLIRNAGEALGVSALINLSPNSSSDALFRSSVDVENLASIEAMLRGPN
                     PFEQTPKGFAGLKSPKWPSEMFPDDPAWKIDPARVNRGRAIYAEICAECHLGPVNDPG
                     FDTQFPDKSFWSPNEPHWQKDGDGPVLYEVQKSVDGMGTDPGQANVLKSRMVEVPGFL
                     DIDPARDLGKLWGCTDVPISSTTDMSFALALMTVVDRISRKWMDDNHLSDEQRQALWR
                     SRKNCPNPSNAKETHYRARPLNGVWATAPYLHNGSVPSLYWMLHPAAERPKQFCMGRR
                     DFDPQQVGFRVEAGAKPACRRGETLFSAVDSKGLAILGNSNLGHSLEGTPGPGKPGVI
                     GRLLTEDERYELIEYLKTL"
     gene            complement(4696..6447)
                     /locus_tag="VLJ17_15755"
     CDS             complement(4696..6447)
                     /locus_tag="VLJ17_15755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007615133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV24469.1"
                     /translation="MERRLAAIVCADVAGYSRMMGADEEGTHATFKAHRSAIYPVILN
                     HGGRLVKNTGDGFLLEYPSVVGALQSSIEIQTLMAERNSRLPPNRLMQFRLGVHMGDV
                     MADEDEVFGDGVTIAVRLESAATPGGVAVSGKAYQEASKHIHVPLVDAGSRRFKNIEE
                     AISVWTWDPGGSETCSQDPHNKSNLRAQYRTAIVGVLPFVNLSDRAEEYFSDGLTEDL
                     ILALSLQSFFRVLSRNATFSFKGQNLSTRLMAREIDATYLIQGSVRRAGNKIRVTAQL
                     IAPESGEQLWASRYDSDIGDLFAMQDELTTNLSAAIAPEIFRAEASAPARSSADPTAW
                     DRFLKGLSHYYRHTKTDFEASIDLFRQATILDPSLSIARAYLAAISVQGMQYGWITST
                     RELWTEAMSLAESSVRLDPRSSFAFSLLSYMHAMEGSHDAAMVTAKRAVSLNPYDIGA
                     QGVLGLCHFAIGEHEQAIELFSVAVQRGNSDPRYKWDALLAFAHYLLRQYDASLSWAR
                     EASYLNPNHLQVLAVRAATLAQMGQADEAAKATQALLNGFPTVTVDRHLRNFRWGNPA
                     DIAHYREGLLKAGVPSG"
BASE COUNT         1476 a         2057 c         2184 g         1459 t
ORIGIN      
        1 cgccagtcga gaaaaaacag gacgacgaga tcaactgctg atcatgcggg cctgtttgtt
       61 ctgttggcga gtctatcgtg agttttatcg cctgggtgcc taaacaataa aatgtgctgg
      121 tccaggaatg actggcgcgc tcggagagcg tcgcacccgt gactattgca aaggaatcaa
      181 atgacctgca ggtctagcag cgggcgatgt tggacgaaac gctggacgtt ttgttgtact
      241 cccctcgaag cggatttgac gccacccttt aagccccgga gataggcgtg cattcacatg
      301 ggatatcgac atggcacccc ggtcaaagct gctgccaaaa gtcatgattg ctatcactac
      361 gcttgggggt gccgcatcaa gccagccctc accacagcgc gagttgttgc aagcggcgga
      421 gcacggcgaa atcgcgacca tgaaacgact catcgcggcg ggagcattgc tcgatcctgt
      481 cgaccggcga cggcaaacac ctctccttat tgcggtcgag aagggtcaat acgaggcggc
      541 cgcgttgcta atccaggctc gtgccgacat caatgcgcag gccgaaaata tggacacgcc
      601 ctggctactg gctggcgcac tcggacggac agaaatgctc cgcttgatga ttccgaaagg
      661 accggatttg tcattgcgca atcgctttgg cggcaacgcc ttgatacccg cttgcgagcg
      721 cggtcacgtc gacaccgtaa aggtcctgtt gacgaccaag atcgacgtga accatgtcaa
      781 caacctcggc tggacgtgtc tgcttgaggc cgtgatcctt ggcaatggcg gtccgcgcta
      841 tcgcgatgtc acgaagcttg tcctagcggc tggcgccaat ccgaatatcg ccgatcgcgg
      901 cggcgtttcg cccttcaccc atgccatgcg caaagggcag gacgaagttg caaacctgat
      961 caaggcggca ggcggacggt aactgcgttg gagaggagga agtcgttcgg tctcgttgcg
     1021 cgcggcggct tgggctggct acgcttgtgg cacaagtacc gaccgggatg atgggcgtcc
     1081 gttcggcgag taccacccgg aaatactttg agtttctgta tccagttggc ctattcaatc
     1141 ggttacaagt catttcccaa ctgactgacc atgactgcgc aaggacggcc cttccggacc
     1201 gcctttgatc gccgcccaag cgtcgaaatc cggcacggtg ccaccggatt accgttttcc
     1261 ggccgaatga tcgccagagc atccggaacg aggcagggcg acaaagaccg ctcggtcagc
     1321 gccgatcaga acgaacctct ttgccgactt ggcggtagaa cgttgagctg gtgacgcagg
     1381 accacgacct cagccagaag cgccaccttc gagcgcaaca gtccgaccaa ggcgcgtaaa
     1441 atgagctcga aggtattcat catcgagcgc gagcatcacc cgattcggtt gaatgtgcca
     1501 gtggatagga tttacggtag gcacagccct tattttaata cacagcaggg cccagggcgg
     1561 gacaactctt aatcagcggg tccaaggttc gtgtccttgt gcgcccaaag cgaaaggccg
     1621 gcgcccgttt gaatcgtcct gctggttaca gcgtcttcag atattcgatc agctcgtaac
     1681 gctcgtcctc tgtcagcagg cggccgatga cacctggttt gccgggtccc ggcgttccct
     1741 ccagcgagtg gccgaggttg ctgttgccta atatcgccaa tccctttgaa tcgaccgccg
     1801 agaatagcgt ttcgccgcga cggcacgccg gctttgcgcc tgcctccacg cggaagccga
     1861 cttgctgtgg atcgaagtcg cgcctgccca tgcagaattg tttcggccgt tcggcggcag
     1921 gatggagcat ccagtagagc gaaggcaccg agccattatg aagatacggc gccgtcgccc
     1981 agacgccgtt caacggacgc gcgcggtaat gggtttcctt cgcgttgctg ggattgggac
     2041 agttcttgcg cgagcgccag agtgcctggc gttgttcatc tgaaagatga ttgtcgtcca
     2101 tccatttccg gctgatgcgg tcgacgacgg tcatcaaggc gagcgcaaat gacatgtcgg
     2161 tagtggagga gatgggaacg tctgtacacc cccaaagctt tccgaggtca cgggcagggt
     2221 caatgtcgag gaaacccggc acttcgacca ttcgcgactt caggacattg gcctggccgg
     2281 ggtcggtgcc catgccgtcc acgctcttct gaacctcgta cagcaccggt ccatcgccgt
     2341 ccttttgcca atggggttca ttcggtgacc agaaactctt gtccggaaac tgcgtatcga
     2401 acccgggatc attgaccggc ccgagatggc attccgcgca gatctccgca tagatcgcgc
     2461 gaccgcgatt gacgcgggca ggatcgatct tccaggcagg atcgtcgggg aacatctctg
     2521 acggccattt cggcgatttc agcccggcaa aaccctttgg cgtttgttca aacgggttgg
     2581 gcccgcgcag cattgcttcg atgctggcga gattttcgac atcgacggaa gagcgaaaca
     2641 gcgcatcaga agaactgttg ggtgataggt tgatcaacgc ggagacgccg agcgcctcac
     2701 cggcattgcg aatgagcggc tgttcgatcg aagcgtcgta ctgcgcccaa tggaaccacg
     2761 gaacggtcca gatcggcggg aagctgaccg gcgcatcgcg caggtgcacg ttctcttcag
     2821 atacggtgag cccgcttgca accagatcgg tataaaaaac ttggttgccg atccggttca
     2881 gcgcatcgag ccggccgtaa ccttcctcgg tgtcttggct gtgcactctg ttatacaggt
     2941 ttgctaacgt ggctgcctgt gtcttcacga aggccgccgc gtccaacagt ccctttttca
     3001 gctcagtgcg ctgcgtctcg gtggcgcctg gaccgagcac gcgcgtggca aagcggttga
     3061 agcggcccgg taccaccagc gtataggcaa tcgagaggcc tgttacctgc tcaagcttca
     3121 agaggttcac catcgcgggg ccgccgtcgt agcggatgct ggtgcccttg tagtgaatgc
     3181 tgccggaatg gcaggccgcg caggtcaatc cgaccatatc gggttgcgcg gcgccggttc
     3241 cgggatcggt ggcgccgatc agacgcgcaa agccgacggg taagccgtcg aaattctcaa
     3301 cctgccactt gccggtcagt gatggcgtcg atgccggcgc atcggtggaa tccgcatagc
     3361 cgtagcggag cagggtcgcc ttgtcggtgt ggacggtttt cggactggga atgaagccga
     3421 agcattcgag atagttactg tcgctgagta gcccgggtcg ggaaaacaca tagatacgtg
     3481 gctgctcgag cgccacgaac caagcgtaag gtactggaaa agtcttggtg ccctggctca
     3541 cgtggtgaaa ccaatgccga tcctccatgg accagttctg atcaagccag cgcgccgcct
     3601 tgatcggcag cgggtcgggc agaggaggcg gcagcaattg cgacagggta gcaggcaact
     3661 gcccaggcgt cgccgccaaa atcgctcgga gctgatccgg aaattgggtg atcgcgagca
     3721 cgagcgccat ggcaagggcg gcaagcaggc tcgcggcaga tttgacgatc gtcacagctc
     3781 ggctcggcgt cggcaaagga tgcgctagcc gcctcacgat ccgctgggga aagcgccggt
     3841 ccacaaacaa cgtcctgact tcggcgacgc tgagatagcg ataatcgtct tcgcctttgc
     3901 ccaggatact aagcagaacc ggccattcgc cgtccattag caagcggtcg atcggacgcc
     3961 ggtgtccttt ggcgcgcgtg aaattcgcat ccatgtaggt cgcgatttgc tttgaattca
     4021 gcccgcgttc ggtgccgcca ccgggggctg tgtaatccga accaaagccg gcaaggcgct
     4081 cgatctcgga ctcgtccacc tgaccgtcga cgttgaggat ccgcgagccg gcgccgtgtt
     4141 tgtcgagcgg gccgttgcgc agttcgtcga gtacggcacc cgaccaccaa ctttttagca
     4201 agcgcaacgg gctcagccca ttggcgatca gcgcgaccaa atagatctct atcccggcaa
     4261 cgcgctcctt cagacctttt tcgccggtcg cagcttcgat ggtaccagtc agctttggca
     4321 gcgggaccat atgtgcgccg acataaccgc cggcgacgag gccacgcaaa aaggggcagg
     4381 gattgttggg cgacactgga atctgctggc cggcgccggc agatgaatcg gcctgtgggt
     4441 ctggcatggc cttcaatcct caaaatatgg caccgtcaaa aagggctgtt gtcgaattga
     4501 gcccgataga aaatcaaaaa ctcgacgacg gcactctacc tttggtgtgg tggaggtttg
     4561 ggcagaatcc gattcggtgt caactctatg caggcaaata gcggtgcgcg atttttttga
     4621 agtactcgcg tgggtcttgc cgcaaccgac ttcgcccggg gatcgcgcgt ttgcaggcga
     4681 acctaatcga ctgaattagc ccgaggggac ccccgctttt aaaagcccct cgcggtaatg
     4741 ggcaatgtct gccgggtttc cccagcggaa atttcgcagg tgccggtcga cagttacggt
     4801 aggaaatcca tttaaaagag cctgggtcgc ttttgcggct tcatccgcct gtcccatttg
     4861 cgctagcgtt gcggccctga ccgcgagcac ctggaggtga ttgggattga ggtatgaggc
     4921 ttcgcgggcc cacgacaatg aggcgtcgta ttgcctcaac aggtaatgcg caaaggccaa
     4981 caacgcgtcc catttgtacc gcgggtcgct gttgcctcgt tgcaccgcca ctgaaaacag
     5041 ctcgatagcc tgctcatgct cgccgatagc aaagtgacat agtcccagga ctccctgtgc
     5101 gccgatgtcg taagggttaa ggctgaccgc tctcttcgcc gtcaccatgg cggcgtcatg
     5161 gcttccttcc attgcgtgca tgtaggacaa cagactgaac gcaaaggagg agcggggatc
     5221 aagccggacg ctgctttccg cgaggctcat cgcctcagtc cacaattccc tagtgctcgt
     5281 gatccatccg tattgcatgc cttgaacgct aatcgcggcg aggtaagcgc gtgcaatcga
     5341 cagcgacgga tcgagaatgg tagcttgtct gaacaaatcg atcgaggctt caaaatcggt
     5401 tttcgtgtgc ctgtagtaat gggagaggcc tttcaggaac cggtcccatg cggtcgggtc
     5461 ggccgatgac cgggccggag ccgaagcctc ggcgcggaaa atttcgggcg caatcgccgc
     5521 cgacagattt gtggtgagct cgtcctgcat cgcaaataga tcgccgatat cgctgtcata
     5581 tcggctggcc cataattgct cgccgctctc gggcgcgatc agttgcgccg tcacccggat
     5641 cttgttgccc gcgcggcgca ccgagccctg gatcagatag gtcgcgtcga tttcgcgtgc
     5701 cataagacgc gtcgaaagat tctggccttt gaacgagaag gtcgcgtttc ggctgagaac
     5761 ccggaaaaaa gactgtagcg acaaagcgag gatgaggtct tcggtcaggc cgtcggaaaa
     5821 atattcctca gcgcgatcgc tgagattgac gaacggaagt acacccacga tcgctgtgcg
     5881 atattgggct cgcagattcg acttgttatg gggatcctga ctgcacgttt ccgatccgcc
     5941 aggatcccag gtccatacac tgattgcttc ttcgatgttc ttgaagcgcc ggctgccggc
     6001 gtcgaccagc ggaacgtgaa tatgtttgct cgcttcctgg taggccttgc cggagacggc
     6061 gactccgccg ggcgtggccg cggactcgag acgaaccgca atggtcacac cgtcgccgaa
     6121 aacctcatcc tcgtcggcca tcacatcgcc catgtggacg ccgagacgaa actgcatgag
     6181 ccgattcggc ggcagccggg agttgcgctc ggccatcagc gtctggattt cgatggatga
     6241 ctgaagcgcg ccgacgacgc tgggatattc cagaaggaaa ccgtcgcccg tgtttttgac
     6301 caggcggccg ccatgattga gaatgaccgg atagatggcg ctgcggtggg ccttgaaggt
     6361 cgcgtgcgtg ccttcctcgt cggcgcccat catgcgggaa tagccggcga cgtccgcgca
     6421 aacaatggcg gccaggcgtc tttccatcct cagcgcatct cctgtattcg cggtccggcg
     6481 cgctttacgg tacgcggccg gagaaccgaa gccaatggtt taaagcgcgg tctcgcgctt
     6541 gtgcgagtgt tcacctaatc cacggcgaat tcgtaaatca cgctgcgatt ggcatctgga
     6601 atagaccgcg gcagtggtgc cgccacgcgt agtggtcgag gacggcatgg acagccggaa
     6661 atcccagatt cccaagccct cgacaaggcg acggccgagc cgcgtctgcg cgcttcgaat
     6721 tccccgcaac caaaccgctg gcgtaagcgg aacttgagca agccgaactg aactggcctg
     6781 actgcgtcgt ccgtcagtcg tttcttttag cgcgacacaa tacgagcggt cccactcagc
     6841 tattgcgctc agcggatgat ctcacgtttc gtttgctcca atccgccgtg cggtctgcgt
     6901 ccggagggac ggaggggcgg ggggccagat acgaacgcga aatcatcgga gccaaatgcg
     6961 tcgtgggaga cgcccgtata cttgcgagcg ctagagcatt tgacgaaaag gttgaatcgc
     7021 tgattgtgga ttcccacgac ggcgctaatc ggattcaaga tccccactgg tgcaaagggg
     7081 gccagtcatt gaatggggaa gccttattcc gacgatttgc gcgaacgtgt cgttgcggca
     7141 atcgaatccg gtcatacccg tgtggaagtt gccgag
//
LOCUS       DATILV010000663         3531 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_154486, whole genome shotgun sequence.
ACCESSION   DATILV010000663 DATILV010000000
VERSION     DATILV010000663.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3531
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154486"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..382
                     /locus_tag="VLJ17_15760"
     CDS             <1..382
                     /locus_tag="VLJ17_15760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008548009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HSV24470.1"
                     /translation="RKLLEERSPLNRVDRIVRPLLIAQGANDVRVKPSESEQIVSAMQ
                     ARNIPVTYIYYSDEGHGFRREENRRSFNAVLEMFLAKHLGGRAEPIGNDFAGSTIAFK
                     AGRDLIPGLDESPLNVPMGMRHNP"
     gene            798..1235
                     /locus_tag="VLJ17_15765"
     CDS             798..1235
                     /locus_tag="VLJ17_15765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHRD domain-containing protein"
                     /protein_id="HSV24471.1"
                     /translation="MHTSIICSVSIGLALSVLVAANSATVAETMTYKAVLNAQNQPTP
                     NDSKGTGTAEVTYDTTSKTLTWAINFDGLTGPATVAHFHGPAAAGANAGVALMIGTNP
                     TSPATGTATLTDAQAADLQGGRWYINIHTNANRGGEIRGQVVK"
     gene            1969..2499
                     /locus_tag="VLJ17_15770"
     CDS             1969..2499
                     /locus_tag="VLJ17_15770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003600224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HSV24472.1"
                     /translation="MKILHTAHVASQWHAKQRRKGADREPYVNHLLEVAHLVAAAGAA
                     EDVICAALLHDAIEDQRITATRISREFGSDVAALVCELTDDKSLPKAERKAIEIAAAP
                     KLSPGAKLIRIADKISNVRSLGLSPPADWSAQRRFEYIEFCGKVVAGLRGTNPMLEAL
                     FDQAAEDAREANRQRE"
     gene            complement(2768..3217)
                     /locus_tag="VLJ17_15775"
     CDS             complement(2768..3217)
                     /locus_tag="VLJ17_15775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013217382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24473.1"
                     /translation="MMSKIACGALGALALMGCAFPVHAQPADPAVEFAFMPRTMTVTL
                     LNEGGKYVVVDLRHIPQGGTCRMDKDATIARVGPGGSPETTRVRYAAAQVSAGGCPFL
                     TTFDMANTDYAAARTAFLQMKDEASKKVEQVKKELGEKWDEVFGKKD"
BASE COUNT          764 a         1116 c         1009 g          642 t
ORIGIN      
        1 acgtaagctc ctggaggaac gctcgcccct caaccgcgtc gaccgcatcg tgcgcccgct
       61 cctgatcgcg cagggcgcca acgacgtgcg ggtcaagccg tcggaatccg agcagatcgt
      121 cagcgccatg caggcgcgca atatcccggt gacctacatc tactattcgg acgaaggcca
      181 cggtttccgg cgggaggaaa atcgccgttc gtttaacgcc gtcctcgaaa tgtttctcgc
      241 caaacatctg ggtggcaggg ccgagcccat tggtaatgac ttcgcgggat cgactatcgc
      301 gttcaaggcc gggcgcgatt tgattcccgg tctcgatgaa tctccactca atgttccaat
      361 ggggatgcgc cacaacccat gacgcacctc acgacgccat tccggcggcg cggcccccgc
      421 atcgccctca gttcacgcgg atgctgggtc tggctgcggc tacgctttag cccagaccgt
      481 gctttctcag ccgcgcagcg acatggccaa aaccatgcgc attgggctgg cctggataac
      541 gaccgataag ggaatcctct ggcacaacgg tatgatcggc ggctacagaa gctttctcgg
      601 agcgaaatcc gaattccacg gatgaatcag tgaactgcac cgcactcacc cagattcagc
      661 gataggtacc ggtgcgccgg gaggcttggg cagcccgtct gtggccgctt ccaggcaacc
      721 ccgccatatg atatggtctg ggtggctcgt cccacatcgg ctcaataatc aaacccatca
      781 agcgggagga caaatcgatg cataccagca ttatttgcag cgtatcgatc ggactagcgc
      841 tgtccgtgct cgtggccgcc aactcggcaa ccgtcgccga gacgatgacc tacaaggccg
      901 tgctcaatgc gcaaaatcaa ccaacaccca acgacagcaa gggcaccggg acagcggagg
      961 tgacctacga caccaccagc aagactttga cctgggcgat caacttcgat gggcttaccg
     1021 gccctgcgac agtggcccat ttccacggcc ccgcggcggc gggcgcaaat gctggcgtgg
     1081 ctctcatgat cggcacaaac ccgaccagcc ccgccacggg cacggcaacg ttaaccgacg
     1141 cccaggccgc cgacctccag ggaggccgct ggtacatcaa tattcacacc aacgcaaacc
     1201 gcggcggcga gatccgcgga caagtcgtga agtgagttgg accgactgag catgcccaac
     1261 gcgaccggtc gggggctatg gctgtacttc gcattcgggt cacgggtgcc gttacgacta
     1321 cgttgatatc accaccggtg taccctccgg atagttgtcg acttactgca tcgccccacg
     1381 tcggcggagt cgggctgccc agttgccatt cgagatgcgg caaacagcga gcctgtgaaa
     1441 tacggcacca tcaatgttgc ggacgccaac gcggtcacac gacccatcca cgatcgcata
     1501 ccggtggtgc tggacaaggt ggatatcgcc ctatggctga gcggcacagc aggcgcagag
     1561 ctgtctgggg catcaacgag accggcaccg gtgatgatga tcccacgttg atcgatgaga
     1621 tcgccgctta atgctcaagc ggccgacgcg gcaattaacc acaccggacc tcacaactcg
     1681 atagcggatg cgccccagcc caaatggtgc cccttgaggc gggcgtttag ctcccgcgtc
     1741 ttcgtaagcg agcatcgaca gctcgcccga cgtcgaatga ccaggacgtc ggccattccg
     1801 gccgccgcac gcgaccgtcg gctacggcaa tctaaaaagg gattgccccg ctatggatcg
     1861 cggcgacgaa gtgaaaacgt ccccctgcgg gatgttcggc aatggatttc gcgtcaggac
     1921 tgcttgcgtc cttcgcttgc gtacccacat caaaggcggg ggaccagttt gaaaatcctt
     1981 cataccgccc atgtcgcgtc acaatggcac gctaagcagc gccgcaaggg tgccgatcgc
     2041 gagccatacg ttaaccacct gctggaggtc gctcacctgg tggctgccgc tggcgccgcc
     2101 gaggacgtga tctgtgctgc tctgcttcac gacgccatcg aggaccaacg aataaccgca
     2161 acgcggatca gccgcgaatt cggatcggat gtcgccgccc tcgtttgcga gcttactgat
     2221 gacaagtcgc taccaaaggc cgagcggaag gcgatcgaga tcgctgcagc tcccaaactg
     2281 agcccgggtg ccaagctcat acggatcgcc gacaagataa gcaatgtgcg gtcactgggt
     2341 ttgagcccgc ccgccgactg gtccgcgcag cgccgattcg aatatatcga attctgcggc
     2401 aaggtagtgg caggcctgcg tggcaccaat cccatgctgg aggccctgtt cgatcaggct
     2461 gccgaagatg cccgcgaagc caaccgacaa agggaatgaa agaacgcgaa gttttgggag
     2521 aggcgatcag ggcgcatgcc tgtggtgctc gacaagggga aataccgagc cgtagctgac
     2581 cggtgcggtg cgttcgcatg tagccggtat ccgggcgcgt caacaagacc ggcagcggcg
     2641 acgacgcttg tcgaggtagc cgcatgatgg cgcctcatta catggtacag cggcgcccca
     2701 aaatagcttc gtaggccttt gtctgctccg tccacccgaa ccagggatgt aggcgatcgc
     2761 cccgcgctta gtccttcttg ccaaatacct cgtcccactt ttcacccagc tccttcttaa
     2821 cctgttccac ttttttcgat gcctcatcct tcatttgaag gaaagctgta cgagcggccg
     2881 cgtagtcggt attcgccatg tcaaatgtcg tcagaaacgg gcatccgccg gcgctgacct
     2941 gagctgcagc gtagcgcaca cgcgtcgtct cggggcttcc acctggtccc acgcgcgcga
     3001 tcgtggcgtc cttatccatt cggcaggtcc cgccttgcgg aatatgcctc aggtcgacaa
     3061 ccacgtactt tcccccttca ttaaggagag tcacagtcat cgtgcgtggc atgaaggcaa
     3121 attcgaccgc cgggtctgcg ggttgcgcat gaacggggaa cgcgcatccc attaacgcga
     3181 gagccccgag ggctccacag gcgattttag acatcattgt atgcctcctt cgatcgagcc
     3241 aattggccca gaataactgc caaagtcgag gttgcgttcc ctagaactcg gcaccagtta
     3301 caagcccctg acgggatcgc acacgcgctg atatccatga tcgtccaaag cacggaacgc
     3361 tccaatcgga ggctgccgcg ccgcaaagat tgaaacaaga ggaaggccgc agccgcaaca
     3421 cattcctcgg aactatcctc gcagcggtgg cggagctcaa acaatcgacg gtgcacttca
     3481 agcagcaagc gacagcacct ctggatctca cagatatcta gacgccatcg a
//
LOCUS       DATILV010000664         3580 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_5011575, whole genome shotgun sequence.
ACCESSION   DATILV010000664 DATILV010000000
VERSION     DATILV010000664.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3580
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5011575"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(216..584)
                     /locus_tag="VLJ17_15780"
     CDS             complement(216..584)
                     /locus_tag="VLJ17_15780"
                     /inference="COORDINATES: protein motif:HMM:NF018228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV24474.1"
                     /translation="MSSRAVISVVDDDAFVRQATENLLLSLGFGVITFASAEAFLDSG
                     QVDDTSCLIADVHMPGLTGLDLQRRLIKDGKRVPIIFITAFFSENVRKRALEAGAIGF
                     LSKPFGDDTLIECLHKALNG"
     gene            complement(742..931)
                     /locus_tag="VLJ17_15785"
                     /pseudo
     CDS             complement(742..931)
                     /locus_tag="VLJ17_15785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669147.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase"
     gene            complement(1284..3182)
                     /locus_tag="VLJ17_15790"
     CDS             complement(1284..3182)
                     /locus_tag="VLJ17_15790"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV24475.1"
                     /translation="MGAIIRAIFVTLVSCTMCVFRAWKELGRAWLVGIFLLATLGTAM
                     AQPRRVLLLHSFGPHFAPWSAIAGRFREDLIRQSPNPIDLYEASLQNGRFERSQDEGP
                     FLDYLRSLFVENDLDLAVAMGAPAARFFQRYRSQIFPSTPLLITGADERTFNDAALTT
                     YDTAVAVNFDQAKQIENILQVLPDTANIAVVIGDSPLENFWVEELRRAFQPFGNRVTF
                     DWFNKLSLDDMVKRVVKLPPRSAIYYATVRVDARGVPQEEDHVLSQFREVASAPIFSY
                     IDSNFGRGIVGGPLLSSEQLAHQSAVVAVRILGGETAGNIKTPALGLSVPMYDWRELQ
                     RWNISEAILPPSSEIHFRGPTAWERYRVQVLVICAALLLQAALICWLLYEQRRRHRAE
                     VLSRNFMSELTHMNRIATAGELSASIAHEVNQPLAGMVLTANAALRWLAAETPNLGKV
                     RDALAQIVSAGHRAGDIIRNVRTMFGKDTQDRRPVDINRVILAVLKLVQIEIQRHEIA
                     VQTQLDHRLPPVIGLEIQLQQVILNLIMNAIESMQSGQSWPRELRVKSELGQSDEVRV
                     CIEDSGTGTAPSDLERVFTPLFTTKERGMGMGLSICHSIIAGHNGRIWATAGVERGAI
                     FHFVLPTK"
     gene            complement(3232..>3580)
                     /locus_tag="VLJ17_15795"
     CDS             complement(3232..>3580)
                     /locus_tag="VLJ17_15795"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HSV24476.1"
                     /translation="IALDMVVRGKEDRSFRKSPDTYAVLGPWLVTADELGDPGALDFT
                     LHVNGELRQAANTREMIIGIARQISWASSVYTLYPGDIIMSGTCQGVGPVKPGDVMTV
                     AFQRIGEMTVAVR"
BASE COUNT          842 a         1047 c          947 g          744 t
ORIGIN      
        1 catcgcggcg ataattttta tatcgattct caaggtttca acctcccccc ggcacttggc
       61 aacaccatta ctgtgagtat cgtatatcag atggggtttg gcgtggttcc aattgcaaac
      121 tctcttaact ttaacaagct gatagcttca gcaagctgcc agaaatcgca cgctgattcc
      181 aagaaagctg cggctgagag agatgttcgg cagctctatc cattcaacgc cttgtggagg
      241 cattcgataa gagtatcatc gccgaacggt ttgctgagaa accctatagc tcccgcctca
      301 agcgctcgct tgcggacgtt ctcggaaaag aaggcagtga taaagatgat ggggactcgc
      361 tttccatcct tgatcaggcg tcgctgcagg tcgagacctg tcaatccggg catatgcacg
      421 tccgcaatca gacacgatgt gtcgtcaact tgcccagaat caagaaaagc ttcagcggag
      481 gcgaaggtga tgacgccgaa tcccagcgac agcaaaagat tttcggtcgc ctgccggacg
      541 aaagcgtcgt catcaaccac ggagattaca gctctgctgc tcatagctgg actgcctatg
      601 agttcgtctc gccttcgcca tcatcgatgt ttccagattg cacgccacgc aatttgctta
      661 tcgccatcca ggaacgttgc gcataccgtt gctgccagca tgaatcggtt ggcgtgaatg
      721 gtgttttgac cacagcatac ctcatttcga tggcggatca ggccgcccgg caaccacttg
      781 gtaaaatcca aaccgtgagc ccccaagggc cgactgtggc aactgcaaaa actggcacca
      841 gcacagcggt gacggtgaca aatgcacaga tttccatgcg ccgccgccgc cgtgagacgt
      901 tggcgatcaa gccctgtgat atgcccgaca ttgtgcccac gatcaccaat ggcccggtcg
      961 tactatgaac gattcaatca gacccccgca ttgcattttg tcaaaacata gccagaatat
     1021 ttcatactac gaactaagtc gtaaacgccg atgcgcgaaa agtggttata tgagcgccac
     1081 tttcatcgat ttagcaccac ccccgacggt ggcggtacca gcgggcaagt gcgcagcccg
     1141 ccgccaggat cacgccggtt gcgagtaaat cggacgctgg cgcggctgaa gctgaacttc
     1201 tacgcagaca cgttctcacc ggattagtcg caatttggca tcgcggccga ctttgccgcg
     1261 tggtcaaagg ttccggggag gggtcatttc gtcggcaata caaaatgaaa tatggcacct
     1321 ctctcgacgc cggccgttgc ccagatccga ccgttatgac ccgcgatgat cgaatggcaa
     1381 atggaaaggc ccatccccat gccgcgctcc ttggtcgtaa acagtggcgt gaaaacgcgt
     1441 tcgaggtcag atggggcagt tccagtcccg gagtcttcga tacacacccg cacttcatcc
     1501 gattgaccta gttcggattt gacgcgcagc tcgcgcggcc atgattgtcc tgattgcatg
     1561 gactcgatag cgttcatgat cagattcaag atgacctgct gcaactggat ttcgagaccg
     1621 attacgggcg gcagtcgatg atcaagttgc gtttgaaccg caatttcgtg cctttgtatt
     1681 tcgatctgca cgagtttcaa aaccgccaga atgaccctgt tgatatcaac gggtcttcta
     1741 tcctgcgtgt cttttccgaa cattgtccgg acgttcctga tgatgtcgcc cgcgcgatgg
     1801 ccggcgctca cgatctgagc cagtgcatct cgcaccttcc ccaaattggg tgtttccgct
     1861 gcaagccagc gcagggcggc attggccgtc agcaccatcc cggccagagg ctgattgacc
     1921 tcatgagcga tagaggctga caattcccct gccgtcgcga tgcggttcat gtgggtcagc
     1981 tcggacataa aattgcgaga taagacctcc gcgcgatggc ggcgccgttg ctcgtaaagc
     2041 agccaacaaa tcaacgcggc ctgcagcaga agcgcggcgc aaatcaccag aacctgcaca
     2101 cgataccgct cccatgcggt cggaccgcga aagtgaatct cgctgctcgg cggcaggata
     2161 gcttcactaa tgttccaccg ttgcagttcc cgccaatcgt acatcggcac actcagtccc
     2221 aacgccgggg tcttaatatt gccagcagtt tcaccgccca ggatccgaac ggcaacgact
     2281 gcgctctgat gcgcgagctg ttcgctggag agcaggggac cgccgacgat cccacggcca
     2341 aaattgctat cgatatagct gaagatcggt gcgctcgcga cctcacgaaa ctgcgagagc
     2401 acatgatctt cctcttgcgg aacgccacgt gcatccacac gcacggtcgc atagtagata
     2461 gcagagcgcg gcggcaactt cacaacgcgc tttaccatat catcaagcga caatttgttg
     2521 aaccaatcaa aagtcacacg attcccgaaa ggttgaaacg cgcggcgtag ctcctcgacc
     2581 cagaaatttt ctaatggcga gtcaccgatt accaccgcga tattggccgt atccggcaat
     2641 acctgcagaa tgttttcaat ttgttttgct tgatcgaaat tgaccgcaac agcagtatca
     2701 tatgtggtga gcgcagcgtc gttgaaagta cgttcgtccg cccccgtaat gagcaatggc
     2761 gtagacggaa agatttgtga tcgataccgc tggaagaagc gggctgcggg cgcacccatt
     2821 gcaaccgcaa ggtcgaggtc gttctcgaca aacagagagc gcaggtaatc gaggaacggt
     2881 ccttcgtcct gggaccgttc aaagcgtcca ttttggagcg aagcttcata gagatcgatc
     2941 ggattgggcg attgccttat tagatcctct cggaagcggc ccgcgatagc gctccacggc
     3001 gcaaagtgtg ggccgaacga gtgcaatagg agaacgcgcc gcggttgagc cattgctgtc
     3061 cccaacgtgg ccagcaggaa tatccccacc aaccaagcgc gaccaagctc tttccacgct
     3121 cgaaaaacac acattgtaca agataccaga gtaacgaaga ttgcacgaat aatagcgccc
     3181 atcaaagctc gccgaaactc cggcacgccc cccagcagcc ggcggtcagc gtcaacgcac
     3241 cgctaccgtc atctcaccga tccgttggaa cgccacagtc atcacgtcgc cgggcttgac
     3301 cggcccaacg ccctggcagg tccccgacat gatgatgtcg cccggataaa gcgtatagac
     3361 cgacgaggcc caggaaatct ggcgagcgat gcctatgatc atttcgcgag tattcgcggc
     3421 ctgccgcaac tcgccgttga cgtgcaaggt gaagtccagt gcgcccgggt cgccgagttc
     3481 gtcagccgtg accagccatg ggcccagcac cgcataggta tccggcgatt tgcggaagct
     3541 gcgatcctcc ttgccgcgca ccaccatgtc gagcgcgatc
//
LOCUS       DATILV010000665         3076 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4500065, whole genome shotgun sequence.
ACCESSION   DATILV010000665 DATILV010000000
VERSION     DATILV010000665.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3076
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4500065"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1018)
                     /gene="cydB"
                     /locus_tag="VLJ17_15800"
     CDS             complement(<1..1018)
                     /gene="cydB"
                     /locus_tag="VLJ17_15800"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010973557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016682 - oxidoreductase activity, acting
                     on diphenols and related substances as donors, oxygen as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HSV24477.1"
                     /translation="MTIPLDYESLRVIWWLLLGVLLIGFAIMDGFDLGVAMLLPHVAR
                     SDIERRVVINSIGPFWEGNQVWLILGGGAVFAAWPPVYAAAFSGFYIAMFLVLVTLIL
                     RPVGIDFRNKFSDVRWRTFWDYALFAAGLVPSLVFGVAFGNLLQGVPFIIDSDLRVMY
                     QGSGLFELLNPFGLLCGLLSAAMLATHGAVYLTLRTDSTVQARARDAAMAGAATTIIL
                     FAVAGLWVWLGIDGYAITGAITPDGPSNPLLKTVVRQPHQWFDNYATHRWTIAAPVLG
                     FLGPLLALLLTMARWRGVAFVASAIGIFGIIATAGVSMFPFLMPSDIAPAASLTVWDA
                     SSSRL"
     gene            complement(1026..2591)
                     /locus_tag="VLJ17_15805"
     CDS             complement(1026..2591)
                     /locus_tag="VLJ17_15805"
                     /EC_number="1.10.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018406349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0070069 - cytochrome complex [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0019646 - aerobic electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HSV24478.1"
                     /translation="MFDIDPVSLARLQFAATALYHFLFVPLTLGLSFLLAIMESAYVM
                     TGREIWRDATRFWGKLFGINFAMGVATGITMEFQFGTNWAYYSHYVGDIFGAPLAVEG
                     LMAFFLESTFVGLFFFGWDRLSKHGHLVVTWLVAIGSNLSALWILIANGWMQNPIGAV
                     FNPVTMRMELTSFWDLVFNPVAQAKFVHTVGAGYVTGAMFVVAISAYYLLCGRFQAFA
                     KRSLIVASAFGLASSLCVVVLGDESGYTISENQKMKLAAIEGMWQTEPAPADLNLIGI
                     PNVERRTVDYAIRIPWVLGIIATRSFDQQIPGIDDLVTRAESRIRNGLIAYDALEQLK
                     SSPNDSRAAAQLRDHVADLGYALLLKRYVADPRKADATTIKDAAADTVPGIGTLFWSF
                     RIMAGLGFYFILLFAVIFWDVSHQNFSRRWLLRLMLWSLPLPWIAAELGWVVAEYGRQ
                     PWAIDGVLPTFLAVSSVSTAQILFTLTGFVLFYSALLVTDIVLMRKYIVMGPAKALGL
                     DAPTPQPATVPAE"
     gene            complement(2611..2820)
                     /locus_tag="VLJ17_15810"
     CDS             complement(2611..2820)
                     /locus_tag="VLJ17_15810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24479.1"
                     /translation="MRGVLSSLIAFLAAGARPRTSFAKAIVIVLAIKLVGIAGIKIFM
                     FPQSAQPTINAATMERMIGLSVRLP"
     gene            2854..>3076
                     /locus_tag="VLJ17_15815"
     CDS             2854..>3076
                     /locus_tag="VLJ17_15815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24480.1"
                     /translation="MRPDLTSNGNGLRLAGRTHHIPQRIICPQTRVRRRDDRFALRLV
                     SIGGEITFTSSRRTVLLIILMASGSATNVA"
BASE COUNT          739 a          894 c          905 g          538 t
ORIGIN      
        1 tcagccgact tgatgaggca tcccaaacgg tcaggcttgc cgctggagcg atgtcggaag
       61 gcatgagaaa cgggaacatg ctcacgccgg ctgtggcgat gatgccgaat atgccgatcg
      121 cactggctac gaaggccacc ccgcgccagc gtgccatggt caaaagcaga gcaagcaacg
      181 gaccaaggaa gccgaggaca ggggcagcga tcgtccaacg atgcgtggcg tagttgtcga
      241 accattggtg gggctggcga acaacggttt tcagcaacgg attggacggg ccgtcaggcg
      301 tgatcgcgcc ggtaatggca tagccgtcga tacccagcca cacccacaag cccgctaccg
      361 caaacagaat gatcgtggtt gcagcgccag ccattgcggc atcgcgcgcg cgggcctgga
      421 cggtgctgtc ggttctaagc gtaagataaa ccgcaccgtg ggtcgcgagc attgcggccg
      481 acagcaggcc acacaacaag ccgaatggat tgagcagttc gaatagccca ctgccttggt
      541 acatgacccg caggtcgctg tcgatgatga agggtacgcc ctgcaggaga ttgccaaacg
      601 ccactccaaa aaccaggctg ggaaccaagc cagcagcgaa caaggcgtag tcccagaagg
      661 tgcgccagcg cacgtcggag aatttgtttc ggaagtcgat tccgaccggc cgcaaaatca
      721 gcgtcaccag caccaagaac atcgcgatgt agaaacccga gaacgccgct gcatagaccg
      781 gcggccaagc cgcaaacacc gcgccaccgc cgagaatgag ccatacctga ttgccttccc
      841 agaacggccc gatggagttg atcacgacgc gtcgctcgat atcgctgcgc gccacatgag
      901 gcagcagcat cgctactcca agatcgaatc cgtccatgat ggcgaagccg atgagcagca
      961 cgccgagaag caaccaccaa atgacacgca gactctcata atcgagcggg atcgtcatta
     1021 gtcggtcact ccgccggaac tgttgcgggt tgcggtgtgg gcgcgtccag gcccagggct
     1081 ttcgccgggc ccataacgat gtatttgcgc atcagaacga tgtcggtgac gagaagcgcg
     1141 gaataaaaca gaacaaatcc ggtcaaggta aacagaatct gtgcggtgga cacggaggat
     1201 acggcgagga atgtcggtag aacgccgtcg atcgcccacg gctgtcggcc gtattccgcc
     1261 accacccaac ccagctccgc cgcgatccac ggcagcggca gcgaccacag catcaaacgc
     1321 aaaagccagc ggcgcgagaa gttctgatgt gacacatccc agaagatgac cgcgaacaag
     1381 aggatgaaat agaagccgag cccggccatg atgcggaagc tccaaaacaa cgtgccgatg
     1441 cccgggaccg tatcggcggc tgcgtctttg atcgtcgtgg cgtcggcctt gcgcgggtcg
     1501 gcgacataac gcttgagcag cagggcataa ccgagatccg cgacgtggtc gcgaagttgt
     1561 gcagctgcgc gactgtcgtt gggactgctt ttgagctgtt cgagcgcgtc gtatgcgatc
     1621 aggccgtttc gaatacggct ttcggcccgc gtcacgagat cgtcaattcc cggtatctgt
     1681 tgatcaaatg agcgcgtcgc gatgatgccg agcacccacg gaattctgat cgcgtagtcg
     1741 acagtgcggc gctcgacatt cggaattccg atcagattga ggtcggcagg cgctggctcg
     1801 gtttgccaca tcccctcgat ggcagcgagt ttcatcttct ggttctcaga tatcgtatag
     1861 ccgctctcat cgccgagcac gaccacgcat aaagatgacg ctagtccgaa tgccgatgca
     1921 acgatcaacg atcgtttggc aaaggcctga aatcggccac agagcaggta gtaagccgag
     1981 atcgcaacga cgaacatcgc accggtgaca taaccggctc cgaccgtgtg gacaaatttc
     2041 gcctgagcga ctggattgaa gacaaggtcc cagaacgatg tgagctccat gcgcatcgtg
     2101 accgggttga agacggcgcc gatcggattt tgcatccagc cgttcgcgat caatatccac
     2161 agcgccgaaa ggttggaacc gatcgcgacg agccatgtca ccacgagatg gccgtgcttt
     2221 gacaatcggt cccagccaaa gaagaacagg ccgacgaagg tcgattcaag gaagaaggcc
     2281 atcaggcctt cgaccgcgag cggcgcgccg aatatgtcgc cgacatagtg tgagtaatag
     2341 gcccagttgg tgccaaactg aaactccatg gtgatgccgg tagcgacccc catggcaaaa
     2401 ttgattccga acagcttccc ccaaaacctt gttgcgtcac gccagatttc gcgcccggtc
     2461 atgacgtacg cgctttccat gatggcgagc aggaacgaca gccccagcgt cagaggaacg
     2521 aacagaaagt gatagagagc cgttgcggca aattgcaacc gggcaaggct aacgggatca
     2581 atgtcgaaca ttgcggtggt ccctacttcg ctacggcaag cgcaccgaca ggcctatcat
     2641 ccgctccatt gtggctgcat taatggtcgg ctgggcgctc tgtggaaaca tgaagatttt
     2701 gatgcccgca attccaacca acttgatggc gaggacgatg acgatcgcct ttgcgaatga
     2761 agttcgcggc cttgcgccgg cggcgagaaa ggcgatcaac gacgacaaaa ctcccctcat
     2821 cggattggtc cgcagacttc gaggataccg tcaatgcgcc cggatttgac atccaatggg
     2881 aacggcctgc gcctggcggg acgtactcat catatacccc aacgaatcat ctgtccgcag
     2941 acgagagtgc gccgccggga tgaccgcttc gcattgcgac ttgttagtat cggcggcgag
     3001 atcacgttca cttcgtcccg caggaccgtt cttttgatca tcctcatggc ctccggcagc
     3061 gcgaccaatg tggctc
//
LOCUS       DATILV010000666         3744 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4759099, whole genome shotgun sequence.
ACCESSION   DATILV010000666 DATILV010000000
VERSION     DATILV010000666.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3744
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4759099"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..749)
                     /locus_tag="VLJ17_15820"
     CDS             complement(<1..749)
                     /locus_tag="VLJ17_15820"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSV24481.1"
                     /translation="MAEVLSNDTALANAYDRVRYPGAPQPSAHPAAMGTFACLYGRSF
                     APASHCRVLEVGCGDGANLLSTAATAPQSQFVGFDLAETAIAQAQATAASAGLNNVEF
                     RVMDIRDAPASLGEFDYVIAHGVYAWVPAPVRDALMFLIDRTLAPSGLAFVSYNAMPA
                     SRVRYIVRDILQDRVRDLTDVAEKFAAARECMEFHADIWAQEDALRIAMREQMLATLR
                     RPPEVIFHDEMGEIFEPQFVSQVAAHAKRHR"
     gene            complement(952..2433)
                     /locus_tag="VLJ17_15825"
     CDS             complement(952..2433)
                     /locus_tag="VLJ17_15825"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSV24482.1"
                     /translation="MEALRQATTTNSYDRVRYPSMVQEGLHPASLSVFACLLDRLFAP
                     ASHCRVLEIGCGEGVNLMSIAATAPRSQFVGFDLAETAIATGRATAAAAGLTNVELSV
                     MDILNVPDSLGEFDYITAHGVYAWVPAPVRDAMMRLIGRTLAPNGLALISYNAMPGCR
                     IRQIVRDILQDCLADVSDTAVKLAAAKEWLDFFVSQWSEADPLQKAMRYRVQELLRYP
                     LEVIFHDEMGEIYEPQFVSNVAAHSRKYGLQYLCDAQPARGCESLIPSEEKKALETRV
                     GDDFVRFEQEYDYASLLPYRESLLCRDGSAVDRSAAWTHVQKLLARGKFDPLDADEST
                     SGKFEFRTRNNGRAATSEKVIADLLGRIGAAEPHAVALANGTNSRNIAETILRLFRAG
                     ALLLQTEPFPFSLTPGERPVASALARVQAARGETNLASFLHTTVEIDDANTRHFINLL
                     DGTRTRHDLAVEMARFTCAPVGAIAPRLDENLNRLAQMALLVG"
     gene            2743..3036
                     /locus_tag="VLJ17_15830"
     CDS             2743..3036
                     /locus_tag="VLJ17_15830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24483.1"
                     /translation="MAKNRFEQVDELQPDAINLTLIQKSDGQVGIVHCPKTVAPDQLP
                     SDLTTPEIPVRDAVVGAIELANSKKLPIVVIDRDNIWKSEWGDLWRYRDEDDA"
     gene            complement(3185..3397)
                     /locus_tag="VLJ17_15835"
     CDS             complement(3185..3397)
                     /locus_tag="VLJ17_15835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24484.1"
                     /translation="MKSDEFTAKFGIKIRRTTNPTIIGEILVKLLRLRNMRSVSTSRS
                     SLALDKALRALIKMALSGYDDRPSIT"
     gene            3503..>3744
                     /locus_tag="VLJ17_15840"
     CDS             3503..>3744
                     /locus_tag="VLJ17_15840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24485.1"
                     /translation="MLLVTAVAAVVSASSVAQAQTTCAANAGITIAGNDGVGGTGGTA
                     PLGPMFTGVSSAAGAIVSSIEAANSIFLTQSTAFVSA"
BASE COUNT          771 a         1049 c         1122 g          802 t
ORIGIN      
        1 aatctgtgcc gtttcgcgtg ggcagcaact tgggagacga attgcggctc gaatatttct
       61 cccatctcgt cgtggaagat cacttccgga ggtcgccgca gcgtagcgag catctgttct
      121 cgcattgcaa ttcgcagcgc atcctcttgc gcccaaatgt cggcatggaa ttccatgcac
      181 tctcgtgccg cagcgaattt ctccgcgaca tcggttaggt cacgcacgcg atcctgcaat
      241 atatcgcgca cgatgtagcg cacgcgggac gccggcattg cgttgtagct tacgaatgcc
      301 aggccggacg gggccagtgt ccggtcgatc agaaacatga gcgcatcgcg caccggtgcc
      361 ggcacccacg catagacgcc gtgggcgatg acgtagtcga attcgccaag ggacgccggg
      421 gcgtccctga tgtccatgac ccggaattcg acgttgttca gacctgccga agcggcggtg
      481 gcctgcgcct gcgcgatcgc ggtttcggca aggtcgaacc cgacaaactg tgattgcgga
      541 gccgtcgccg ctgtgctcaa caggttggcg ccgtcgccac agcccacttc caggacgcga
      601 caatgcgagg cgggagcaaa gctgcgcccg taaagacacg cgaacgtgcc cattgcggcc
      661 ggatgcgcag atggctgcgg tgcacccgga tatcggacgc ggtcataggc attcgccagc
      721 gccgtgtcgt tagagagcac ttcggccatg ttttcaccat ttctgcgtag tcatggcggg
      781 gcttatccct gccatccacg ccttgcttgc tgacgcccgg caactaaaac gtggatgccc
      841 atgacaggca cgggcacgtg gagctcaaat caacggtgga gctcaattca aatgtccgct
      901 tcgaaccgca ttgccatgtt tcgtcagacg cctttgcggc aaaccctttg gtcaacctac
      961 caacaacgcc atttgggcca gcctgttcaa gttctcgtct agtcgtggcg cgatggcgcc
     1021 gaccggtgcg caggtgaatc tggccatctc cacggcgaga tcgtgcctgg tgcgggtgcc
     1081 gtcgagcaga ttgatgaaat gcctggtatt ggcatcgtcg atttctactg tcgtgtgcag
     1141 aaacgatgcg agattggtct cgccgcgagc ggcctgcacg cgggcgagcg cgcttgcgac
     1201 ggggcgctcg cccggtgtca aactgaatgg aaacggctcg gtctgcagca agagcgcgcc
     1261 cgcccgaaac agacgaagaa ttgtttcggc gatattccga ctgttcgtcc cgtttgccag
     1321 cgcaactgca tgcggctcgg cagctccgat gcggccgagc agatcggcaa tgaccttttc
     1381 cgaagtggca gcacgaccat tgttgcgggt gcggaattca aatttgccgg atgtggattc
     1441 atcggcatcg agtgggtcga acttccccct ggcgagtaat ttttgcacgt gcgtccaggc
     1501 cgcggaacga tcgacggcgc tgccgtcgcg gcacaacagc gattcccggt agggcagcaa
     1561 tgaggcgtag tcatactcct gctcaaatcg cacgaagtcg tcacccacac gcgtttccaa
     1621 cgcctttttc tcttcgcttg gaatcaatga ctcgcagccg cgtgccggct gagcgtcgca
     1681 cagatattga agcccgtatt ttctgctatg tgcggcgaca ttggagacga attgcggctc
     1741 atagatttcg cccatctcgt catgaaagat gacttcgagg ggataccgta atagctcctg
     1801 gactctatag cgcatcgcct tttgtagcgg gtccgcttcc gaccattgcg atacgaagaa
     1861 atccagccat tcctttgcgg ctgcgagctt cacggcggtg tcggacacat cggccaggca
     1921 atcttgcagg atatcgcgca cgatctgtct gattcggcag ccgggcatag cattatagct
     1981 gatcagcgcc agaccgtttg gggcgagtgt ccggccgatc agacgcatca ttgcgtcacg
     2041 taccggagct ggcacccaag catagactcc gtgggcggtt atgtaatcga actcacccaa
     2101 cgagtccggc acgttcaaga tgtccatgac ggagagttcg acattcgtca gccctgccgc
     2161 tgcggccgtt gcgcggcctg tcgcgatggc ggtttcggca agatcgaagc cgacgaattg
     2221 cgaccgcggc gccgtggccg cgatgctcat caggttgacg ccctcgccgc aaccgatttc
     2281 caggacccgg caatgcgagg caggcgcgaa taggcggtca agcaagcacg caaagacgct
     2341 cagcgaagct ggatgcaagc cctcctgcac catgctggga tatcgaactc gatcgtagga
     2401 attcgttgtc gtcgcttgcc tcagcgcttc catttttcac aacctcgttg cccgatatcc
     2461 gcaggcccgc tgtcagatac tcatttgagg aaatccgaag gcgttgacaa gaacctcggt
     2521 cggcgcggcc gatcaaggtt gcggcttctt gcagtgcgca gcccagcagg ctggaggcgg
     2581 ggcgtaggtc gcgcgaattc cttcgacacc cgcttgccaa acggaataga aagaagaagg
     2641 tgaaggcaag gcggcctgct ggtcgggatg actgttcgtg ggcgcacatt gaagcgagcc
     2701 tgatcttgtc cgaaagccgt aaactcttgg gggacgtttc ccatggccaa aaatcgcttc
     2761 gagcaggttg atgaactcca gccggacgct atcaacctga cgctgatcca aaaaagcgac
     2821 ggccaggtcg ggatcgtgca ctgccctaag acggtggcac ccgatcaatt gccgtcggat
     2881 ctcacaaccc cagagatccc ggtccgcgac gcggtggttg gagcgattga gctcgccaac
     2941 tcgaaaaagc ttcccatcgt tgtgatcgat cgggataaca tttggaagag cgagtggggc
     3001 gatttgtggc gatatcggga cgaggatgac gcgtaaggaa gcgccggagt ggtcataagc
     3061 aagcgggttt attcgcgtta aagtttaatg ttaaaaatat gcacagtgtg acgctgtgca
     3121 aggctgggtg tccttaatcc aggcgatgcg cggccgcagg cgctgccatc aagctgtgcg
     3181 aacatcacgt tattgatggc cgatcatcat agccggacaa cgccattttt atcagtgcac
     3241 gcagtgcttt atctaaagca agtgacgatc gggacgtact caccgaacgc atgttgcgaa
     3301 ggcgcaacag cttaacaaga atttcaccaa tgatggtcgg atttgtggtg cgccttattt
     3361 tgataccgaa ttttgcggta aattcgtctg atttcactgt gaagggaacg acctaggaat
     3421 tgagtacctg ggggtagaaa tgtccgttcc tgttgctttg agtattttga aacggtgtca
     3481 gtttgttggg cgtcagcgcg ggatgttgct agtcaccgcc gtcgccgccg tagtttcggc
     3541 atcttcggta gcgcaggcac agacgacttg cgctgccaat gccggtatta caattgccgg
     3601 caatgacggg gtggggggga ccggcgggac cgccccactt ggtccgatgt ttacgggcgt
     3661 gtcgtcagct gcgggtgcaa tcgtttcgtc gattgaggcc gcaaattcga tttttctcac
     3721 gcaaagcact gcctttgtca gtgc
//
LOCUS       DATILV010000667         2950 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3736887, whole genome shotgun sequence.
ACCESSION   DATILV010000667 DATILV010000000
VERSION     DATILV010000667.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2950)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2950)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2950
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3736887"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..458
                     /locus_tag="VLJ17_15845"
     CDS             <1..458
                     /locus_tag="VLJ17_15845"
                     /inference="COORDINATES: protein motif:HMM:NF020137.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005615 - extracellular space [Evidence
                     IEA];
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M10 family metallopeptidase C-terminal
                     domain-containing protein"
                     /protein_id="HSV24486.1"
                     /translation="TVSYASETDAMVVNLATGTAQRGSAAAAVEDTLATIENVTGGSG
                     NDIITGNAGANVLTGGAGNDTMSGGGGADAYVFNANFGKDKVVFGDTGTDQDILDFAD
                     TIFADFAAVVAHSTQAGADTHIDFDLANGVVLLNYALANLGVDDLRFHH"
     gene            661..2415
                     /locus_tag="VLJ17_15850"
     CDS             661..2415
                     /locus_tag="VLJ17_15850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I secretion system permease/ATPase"
                     /protein_id="HSV24487.1"
                     /translation="MGASNPSTSKPSPIAIGLSASRGAFAAVGILTGLINMLMLTGSF
                     FMLQVYDRVLPSRSVPTLLALGALAAALYAFQGFLDMCRGRILVRIACFLDEKLSTRI
                     YQAVATLPLKTQGKADGLQPVRDLDQIRGFMSGAGPTALFDMPWIPLYLGICFAFHIW
                     IGLTAIAGAIVLVSLTLWTEVLTRAPAKAAAEANARRLGLAETTRRNAEVLQAMGMRG
                     RLTAAWANNNEKFLTSSRRAADVAGGIGSASRVLRMLLQSIVLGVGAYLAIKQEATAG
                     IIIASSILVSRALAPVELSIANWKGFVAARQSRRRLSDLLNLMNQEQPAMQLPPPRRS
                     LSVEALSVAPPGQQQRITVHDASFTLESGQGLGIIGPSAAGKSSLARGIVGVWAPTRG
                     KVRLDGAALEQWSSEGLGPHIGYLPQDVELFDGTVAENIARFTPDPNPESIIAAAHAA
                     GVHDLIVRLPDGYETRIGENGTAISAGQRQRIALARALYGDPFLVVLDEPNSNLDAEG
                     DEALTQAILKARERGAVVIVIAHRPSALLGVDLILAIANGRVQTFGPKEEVLQKVLDR
                     TRPHLRAVKVASEGEVKP"
     gene            2469..>2950
                     /locus_tag="VLJ17_15855"
     CDS             2469..>2950
                     /locus_tag="VLJ17_15855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-binding protein"
                     /protein_id="HSV24488.1"
                     /translation="MTIGLLVAGGLGGWATLTELSGAVVAAGSVVVDSNVKKVQHPTG
                     GVVNELRVRDGARVMAGDVVIRLDETITRANLAIVIKGIDELMARQARLEAERDENEL
                     QFPNELTSRVNNPDVSRVVYGEQKLFDLRKSARAGQKAQLRERIGQLAEEIQGLKEQS
                     "
BASE COUNT          587 a          862 c          942 g          559 t
ORIGIN      
        1 atacggtgtc ctatgcgagc gagaccgacg ccatggtcgt caacctcgcg accggaacgg
       61 cacagcgtgg gtctgcggct gccgccgtcg aagataccct ggcaacgatc gaaaacgtca
      121 ccggcggcag cggcaacgac atcatcactg gcaatgctgg cgccaacgtt ctgaccggtg
      181 gcgccggcaa cgataccatg agcggcggcg gtggcgccga tgcctacgtg ttcaacgcga
      241 acttcggcaa agacaaagtg gtgttcggcg ataccgggac cgatcaggat atcctcgact
      301 tcgcggatac gatcttcgcc gactttgcgg cggtcgtggc tcatagtacc caggcgggcg
      361 ccgacacgca catcgacttc gatctcgcga acggcgtcgt gttgctgaac tacgcattgg
      421 ccaatctggg tgtggacgat ctccgcttcc accactgaag ccgtgtgaaa tcagtcgtac
      481 tttgggcgcg cgtagagcat aggcacttac gagcgcccaa aaactgccaa cagagaactg
      541 ccaacagata gttagagtgg aaggggcaaa gcgaatgaag tgaaattcgg gagggcccca
      601 cggtggtgct accagccgag gcgggcgagt gcagctttga cattggagga aatgtgagtc
      661 gtgggcgcct ctaatcctag cacctcgaag ccgtcgccga tcgcgattgg cctgtctgcc
      721 agccgaggcg cctttgcggc tgtggggatc ctgaccgggc tcatcaatat gctgatgctg
      781 accggctcat tcttcatgtt gcaggtttac gaccgcgtgt tgccgagccg cagcgtaccg
      841 actttgctcg cgttgggcgc gctggcggcc gcactctatg cgtttcaagg cttcctcgac
      901 atgtgccgcg ggcgcattct cgtccgcatc gcatgtttcc tcgatgagaa gttaagcacg
      961 cgcatctacc aagccgtggc gacgctaccg ctcaagaccc agggcaaggc agatggcctc
     1021 caaccggtgc gcgaccttga tcagatccgt ggttttatgt ctggggctgg gccgaccgct
     1081 ctgttcgaca tgccgtggat acctctttat ctgggaatct gcttcgcatt ccacatttgg
     1141 attggcctca cggcgattgc gggcgccatc gtgctggtca gcctgacctt gtggacggag
     1201 gtcctcacgc gcgctccggc caaggccgcc gccgaggcga acgcgcgccg cttgggcttg
     1261 gcggaaacga cacgtcgcaa tgccgaggtg ctccaggcca tggggatgcg gggccggctc
     1321 accgcggcat gggcgaacaa caacgaaaaa ttcctgacat cctcacggcg cgccgccgat
     1381 gtcgcgggag gcattggttc tgcctcccgc gtattgcgga tgttgctgca atcgatagtc
     1441 ctcggcgtcg gcgcctatct ggcgattaag caggaagcaa ccgccggcat cattatcgcc
     1501 agttcgatcc tcgtctcacg ggcgcttgca ccggtcgaac tgtcgatcgc gaattggaag
     1561 ggtttcgtgg cggcccgcca aagccggcga cggctgtccg atctgctcaa tctcatgaac
     1621 caggaacaac ccgcgatgca gttgccgccg ccgcgccgca gcctgtcggt tgaggctctc
     1681 agcgtcgcgc caccggggca gcaacaacgg attacagtac atgatgccag tttcacgctg
     1741 gagagcggac aggggctcgg aattatcggg ccaagcgccg cgggaaaatc gtcgctggca
     1801 cgcggcatcg tcggcgtgtg ggctcctacg cgtggcaaag tccgtctgga cggggcggca
     1861 ctcgaacagt ggtcatcgga gggtttgggt ccgcacattg gatacttgcc ccaggacgtc
     1921 gaactgttcg atggcacggt ggctgaaaac attgcccgtt tcacgcctga tccgaatccg
     1981 gaaagcatca ttgcggcagc ccacgcagct ggcgtgcacg atcttatcgt gcgtcttcca
     2041 gacggatacg aaacgcgcat tggcgaaaac ggtacagcga tctcggctgg ccaacggcag
     2101 cgcatcgcat tggcgcgcgc gctctatggg gatccgtttc tcgtcgtgct cgatgaaccg
     2161 aattccaacc tcgatgccga gggcgacgaa gcgctgacgc aggccattct taaggcacgc
     2221 gaacgcggag ctgtcgtgat cgtgattgcc catcgtccat cggccctgtt gggcgtcgac
     2281 ctgatcctgg caattgcgaa tggtcgcgtg caaacgttcg ggccaaagga ggaggtgctg
     2341 caaaaggtcc tcgatcgcac aagaccccat ttgcgcgccg taaaagtcgc gtctgaaggc
     2401 gaggtgaagc catgacaaca aaagccagcg ccgcaagccg ttcgatccga cgccacgtct
     2461 tggccgcggt gaccataggg ctccttgtag caggcggcct tgggggctgg gccacattaa
     2521 cggaactgtc cggggctgtt gtagcggccg gctctgttgt cgtggattcg aatgtcaaaa
     2581 aggtgcagca cccgacgggc ggggtcgtca acgagcttcg cgtgcgggac ggggcgcggg
     2641 tgatggcggg cgacgtggtt attcgtctcg acgagacgat tacgcgtgcg aatcttgcga
     2701 tcgtcatcaa ggggatcgac gaattgatgg cacggcaggc ccgcttggaa gctgaacggg
     2761 acgaaaacga gctgcaattc ccgaacgaat tgacatcccg tgtgaacaac cctgacgtca
     2821 gccgcgtcgt ctacggcgag cagaagttgt tcgatctgcg caaatctgcg cgggctggcc
     2881 agaaagcgca gctcagagaa cggatcggcc aactcgcgga agaaatccaa ggcttgaagg
     2941 agcagtcgga
//
LOCUS       DATILV010000668         6818 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4500813, whole genome shotgun sequence.
ACCESSION   DATILV010000668 DATILV010000000
VERSION     DATILV010000668.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6818)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6818)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6818
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4500813"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            551..1399
                     /locus_tag="VLJ17_15860"
     CDS             551..1399
                     /locus_tag="VLJ17_15860"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HSV24489.1"
                     /translation="MKIIDMTHVMNVHTPGWVGYAGNKMYYAQNLQTQMIVAQRIDTA
                     LHVGTHFDGAMHATDDRKGDMASLPLNYLVNRGVVVDISPWVTDWSVITPDIIERAGA
                     DIREGDILVLHTGWHRHYEGRPQQDLVKYFCYHPGPNLDTLHWMLEKKIRWWAMDTGS
                     CDHAMNTSIRHMRPDLASQFTRLQGKTPSEFFGSFEYIHKKSGRKVVSDIFPFHNWAF
                     QEGLLHAENLGGDIELMLNRRALIGAFPWRYEGLEGCPCRIVAFLDCGEEVEAVGDAA
                     RAVMPD"
     gene            complement(1543..2517)
                     /locus_tag="VLJ17_15865"
     CDS             complement(1543..2517)
                     /locus_tag="VLJ17_15865"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV24490.1"
                     /translation="MRRTIISTVAGAAIIAMNCAASAQTQLKVIVFPTLSNLAQFAAQ
                     SQGYYSKRGLAVELIYTPSSDELRNGLAQGRYQIAHGGVDNAVAQVETDKVDLFVFMG
                     GNSGLNSLIAQPEVRSYEDLRGKTMAVDSPVTAFALLMYKMLDVKGLKRGDYDVKAVG
                     GSTQRFQALMKDKTYAAAILNPPFSIQARDAGFQDLGAAVDVIGPYQSDAGWVLRSWG
                     EANAETLVHYIQANIEGIRFALNPANKAAITSIVAERLNLPEQIVARTLRSAFDQKGF
                     PADAKFDMEGFRNVLKLRADILGTWGGVPPAPEKYLDLSYYQRAMAGL"
     gene            2923..4524
                     /locus_tag="VLJ17_15870"
     CDS             2923..4524
                     /locus_tag="VLJ17_15870"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSV24491.1"
                     /translation="MKESFRQFLDRLRQAGELIDLHQPVDIRHISTLVDQAKTALFFH
                     NVIGYDMPVVSGIIRTRERATMALGCDTYAQIEYKLKAAIDRPIAPTYVKSSPTHEVV
                     AVGDGVDLYKLPIPMSSIYDGGPMITAGVVIARDPELGVNSGIYRFIVKEKSLTGIDI
                     VTPNNMRLFVQRALERKEPLPISISIGTHPIEITGSGYRAPLGVDEMGIAGGLRGIPV
                     ELAPCMTIDLPYIADAEIVLEAEILPTGWTWPEGRFGEFTRLMGGLHWNPLVHIKAIT
                     MRKDAIYYNLHMPWENTWLAAPTRYAAIRQALKTAGVQVVDINVTLGGCAFWHAVISI
                     KKQPGEAKNALLAALSVMDLKHVVVVDDDIDVFDPTEVEWAIATRVQGDKDIMIIANA
                     RAKPLDPSLPQGSGVVPTGAKVGIDATIPERIPKEHYERITYAYADRAKIGDYVKGKA
                     DSGGETGDERVITTLAEEILAAIDEEPLYYTDIAERFAGYNFRTIAQAIGHLHATEKL
                     WQDPRGRMCVRGSKFAAKSPVGRPT"
     gene            4521..5417
                     /locus_tag="VLJ17_15875"
     CDS             4521..5417
                     /locus_tag="VLJ17_15875"
                     /EC_number="4.1.3.3"
                     /EC_number="4.2.1.41"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006336842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009436 - glyoxylate catabolic process
                     [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HSV24492.1"
                     /translation="MNKFKLSGVIAAVATACDGAGEPDCTRSVVLARFLLDHGCDGLN
                     VLGTTGEATSYALNQRQAVMNAYRTAGLPLDRMMVGSGAAAIADAVALTRHAAELGFG
                     GALVLPPFYYKGVPDDGLASYVAAIVKATADRPIPLYLYHYPQLSGVPWHPKLIRRLL
                     AAHGDRITGLKDSSGDMAYAREAAAIDPDFRVFPSTEAVLLEARSGVFAGCISATANL
                     NSDLCARTYHGGDAAALEAAVTIRKLFDGRALVPGVKALLAHIHDDLAWAQVMPPLAV
                     FPAADRAAVISGYDQVRAKRVA"
     gene            5625..5891
                     /gene="rpsT"
                     /locus_tag="VLJ17_15880"
     CDS             5625..5891
                     /gene="rpsT"
                     /locus_tag="VLJ17_15880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010913342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HSV24493.1"
                     /translation="MANTKSAKKATRKIARRTAVNKARRSRMRSSLRNVEDAITSGNK
                     VSAQAALVAAEPALMRAARTGIIHKKAASRKVSRLTHRIAKLGS"
BASE COUNT         1416 a         2033 c         2022 g         1347 t
ORIGIN      
        1 attccctgct ggcagggaaa gtggcagcga attttgcccg gatggcgcgc cgatttggct
       61 ggggcgaagc atttttgcac agcgccctca atgtctggtg aaatcctggc cgacgcaggg
      121 gggtgtatca tagcggcgtc agttccgttt tttgaccacg cttgcctccc gtttccagcg
      181 tccgttggtc agacgttcga tgaaaaaaac agacttgacc cagccaggat aactgggtcg
      241 acgcagttga ttctgtcaca gccagctgcg tgagtacaat gcatctaggc atcagcccct
      301 agaggcaatc atgcaaacaa acaaatgtgg catcagagga ttgaagggcg tccgcggatg
      361 ggagcacact gtctcgggtg gagcgagatc gaaggcacac aaatccaaat ggtttaggct
      421 tgccggcacg accggtaagc ccgcattgat gagagcgaaa tgccggggac agccttgaac
      481 gtggcgtctt ccttcccgga ctatgccgca cgcaatccgg ctaccggcac actcacaagg
      541 aatcccccga atgaaaatta tcgatatgac ccacgtgatg aatgtccaca cccccgggtg
      601 ggtcgggtat gcgggcaaca agatgtacta cgcacaaaac ctgcagaccc agatgatcgt
      661 ggcgcagcgc atcgataccg cgcttcatgt cggtacccat ttcgacggcg ccatgcacgc
      721 aaccgacgac cgcaagggcg atatggcatc gctgccgctg aactacctcg tcaaccgcgg
      781 cgtggtggtg gacatctcgc catgggtcac cgattggtcg gtgattacgc ccgacatcat
      841 cgaacgcgcc ggcgccgaca tccgcgaggg cgatatcctg gtcctgcaca ccggatggca
      901 tcgccattac gaagggcgtc cgcagcagga tttggtgaaa tacttctgct accaccccgg
      961 ccccaatctc gacaccctac actggatgct cgaaaagaag atcaggtggt gggcgatgga
     1021 caccggctcc tgcgaccacg ccatgaacac gtcgatccgt cacatgcgcc ccgaccttgc
     1081 gtcgcagttc accaggctcc aaggcaagac gccgagcgag ttcttcggca gcttcgagta
     1141 cattcacaag aagtcgggac gcaaagtggt gtccgacatc ttcccgtttc acaactgggc
     1201 cttccaggaa ggcctgctgc atgccgagaa tctcggcggc gacatcgagc tgatgctcaa
     1261 ccgccgcgcc ctaatcggcg cattcccgtg gcgctacgag gggctggagg ggtgcccgtg
     1321 ccggatcgtg gcatttctgg attgcgggga ggaggtggag gcggtaggag atgcggccag
     1381 ggcggtgatg cccgactaac ggcgccccac gcaccatcag cgaaccaatg cacccatctg
     1441 gctcagccat acatcttcgt cggcgcaata atccgcgcgg ccacctggac cgcacggatg
     1501 tctcaagcat cggtcgcgtg tgatgggtgc cactaagccg gctcaaagac ccgccatggc
     1561 gcgttggtag taagacaagt cgagatattt ttccggcgcc ggcgggacgc caccccacgt
     1621 gccgagaatg tccgcgcgca gcttcagcac attccgaaaa ccttccatgt cgaacttcgc
     1681 gtccgccggg aagcccttct ggtcgaaggc ggaccgcaaa gtccgcgcca cgatctgctc
     1741 cggcaaattg agtcgctctg cgacaatgct cgttatcgcg gccttattcg ctggattgag
     1801 cgcaaagcga ataccctcga tgttggcctg gatgtagtgc acgagcgttt cggcattggc
     1861 ttcgccccat gagcgcagca cccatccggc gtccgattga taggggccga tcacgtccac
     1921 agcggctccc aaatcttgga atccggcgtc ccgggcctga attgaaaagg gcgggttcaa
     1981 tatggcggca gcataggtct tgtccttcat caaggcttgg aagcgctgcg tactgccccc
     2041 aaccgccttg acgtcgtagt cgccgcgctt gagccccttc acatcgagca tcttgtacat
     2101 gaggagggca aacgccgtga ccggcgaatc aacggccatc gtcttgccgc gcaggtcttc
     2161 gtaggaccgc acctccggtt gggcaatgag actgttaagc ccgctattgc cgcccatgaa
     2221 aacgaacaga tcgaccttgt cggtttcgac ttgtgcgacc gcattatcga cgccgccgtg
     2281 ggcgatctga tagcgaccct gggccagacc gtttcgcagc tcgtcggagc tgggcgtgta
     2341 gatcaactcg accgcgagcc cacgcttgct ataatagccc tgcgattgtg ccgcaaactg
     2401 cgcaaggttg gataatgtcg gaaagacgat gaccttgagt tgcgtctgcg ccgacgccgc
     2461 gcagttcatt gctatgatcg ccgcaccagc aaccgtgctt atgatggtcc tccgcatggc
     2521 gttcctcctt gatcgaaatc gttttgcttg actgctattg tagcactggc aagcgagact
     2581 tcgtcgagcg acttgcccgc ccagcgacga accgttgcag atgccccggg gagcagaacc
     2641 tgaccgggac gcactctaat atgcacggag gttccccgga ccggcgaagg aggaagttcc
     2701 acgcttgcat cctcgccgga aggcaacttt ccgagccgta aaggcgtgcg ttgccgaggc
     2761 tcgtctcgac tttggtgtca ttccggcgcg tgctcttggg tgagcccaga atccataacc
     2821 cctcgccgag ggctatggat tccgaacttg ccacccttgc ggtggcgccc cggaatgatc
     2881 aacaaatggc gacccggcac tacctcctct ggagacattg taatgaagga gagtttccga
     2941 cagttcctcg accgcttgcg gcaggccggc gaacttatcg atctgcatca gcccgtggac
     3001 atccggcata tctcgacgtt ggtggaccag gccaagacgg cgttgttttt ccataacgtc
     3061 atcggctacg acatgccggt ggtgtccggg atcatccgca cgcgcgaacg cgccactatg
     3121 gcactcggtt gcgacaccta cgcgcagatc gagtacaaac tgaaggccgc gatcgaccgg
     3181 ccaattgctc ccacatacgt taaatcctca ccgacgcacg aagtcgtcgc ggtgggcgac
     3241 ggggtcgacc tttacaagct gccgatcccg atgtcgtcga tctacgacgg cggcccgatg
     3301 atcacggcgg gcgtggtgat cgcccgcgac cccgagctcg gtgtcaacag tggcatctat
     3361 cgtttcatcg tcaaggagaa gagcctcacc ggcatcgaca tcgtgactcc caacaacatg
     3421 cgcctgttcg tgcagcgcgc gctcgaacga aaggaaccgc tgccaatctc gatcagcatc
     3481 ggcactcacc cgatcgaaat caccggctca ggctatcggg cacccttggg tgtcgacgag
     3541 atggggatcg cgggcggact acgtggcata ccggtcgagc tcgcgccctg catgacgatt
     3601 gacctgccct atatcgcgga tgccgagatc gtgctcgagg ccgagatctt gccgaccgga
     3661 tggacgtggc cggagggccg cttcggcgag ttcacccgcc tgatgggcgg cctgcattgg
     3721 aatccgctgg tgcacatcaa agcgatcacg atgcgcaagg atgcgatcta ctacaacttg
     3781 catatgccgt gggaaaatac ctggctcgcg gcgccgacgc gctacgcggc aatcaggcag
     3841 gcattgaaga ccgcaggcgt gcaggtcgtg gacatcaatg tcacactcgg cggctgcgct
     3901 ttctggcatg ccgtgatctc gatcaagaag cagccgggcg aggccaagaa tgctctgctc
     3961 gccgcactgt cggtgatgga cctcaaacac gtggtcgtgg tcgacgacga catcgacgtg
     4021 ttcgatccga ccgaggtcga atgggcgatc gcaacacgcg tccaaggcga caaagacatc
     4081 atgatcatcg ccaatgcgcg ggcaaagccg ctcgacccga gcttgccaca gggttcgggc
     4141 gtggtaccca ccggcgctaa agtcggcatc gatgccacga tcccggaacg catcccgaag
     4201 gagcactacg agcgcatcac ctacgcgtat gcggacagag cgaagatcgg cgactacgta
     4261 aagggcaagg cggacagcgg cggcgaaacc ggcgacgaac gtgttatcac gacgttggcg
     4321 gaagaaatct tggcggccat cgatgaggag ccgctgtatt ataccgatat cgcggaacgt
     4381 ttcgcgggtt acaattttcg caccatcgcg caggcgatcg ggcacctgca cgcgaccgaa
     4441 aagttgtggc aggatccgcg cggccgcatg tgcgtgcgtg gctcgaaatt tgccgccaag
     4501 tcaccggtgg ggagaccgac atgaacaagt ttaagctgag cggcgtgata gcagcggtgg
     4561 caaccgcttg tgacggcgcg ggcgagcccg attgcacacg ctcggtcgtt ctcgcccgat
     4621 ttcttctcga tcacggttgc gacgggctga atgtgctcgg cacaacgggc gaagccacat
     4681 cctatgcgtt gaaccaacgc caagccgtca tgaacgctta ccggactgcc ggtttgccgc
     4741 ttgaccgcat gatggtgggc tccggcgcgg ccgcgatcgc agacgccgtg gcgttgactc
     4801 gccacgccgc cgagctcggt tttggcggcg cgctggtgtt gccgccattc tattacaagg
     4861 gcgttccgga tgatgggctc gcgtcctatg tggctgccat cgtgaaggcg acagcggatc
     4921 ggccgattcc cctctatctc tatcattacc cgcaattgtc cggcgtacca tggcacccga
     4981 agctgattcg tcgtctgctc gctgcccatg gcgaccggat cactggctta aaggattcgt
     5041 ccggtgatat ggcctatgcg cgggaggcgg ccgcgatcga cccggatttc agggtgttcc
     5101 cttccactga ggcagttcta ttggaggctc gcagcggggt atttgcgggt tgcatttcgg
     5161 cgaccgccaa cctcaattcg gacctgtgcg ccaggaccta ccatgggggc gatgcggcag
     5221 cccttgaggc ggcggtgacg atccgcaagc tgttcgacgg tcgcgcactg gtaccgggcg
     5281 tgaaagccct gctcgcccac atccacgatg atctcgcctg ggcgcaagtg atgccgccgt
     5341 tggcggtatt tccagccgcc gaccgcgccg ctgtgatttc cggatacgat caggtgcggg
     5401 ccaaacgggt ggcgtgagcg actactggcg cacaacattg cgaggcaaag ttgcggcacg
     5461 aggcacgacg aggcgtcaga ttcagcagtt cttggcgttg acgcccctgc gccaccccac
     5521 tataagctgt gccatcccgg cggcgatctc gccgccgctg ctttttacgc cggcgacgac
     5581 gccgctttat ttgtggtcgc ggacgcagtt ccacggacgg atcgatggcc aacaccaaat
     5641 cggccaaaaa ggccacgcgc aagatcgctc gccgcaccgc ggtaaataag gcgcgccgtt
     5701 cgcgcatgcg cagttcgctg cgtaacgtcg aagatgcgat cacaagcggc aataaagtct
     5761 ccgcacaggc ggctctggta gcggccgaac ccgctctcat gcgggcagcc cgcacaggga
     5821 tcatccataa gaaagctgcg agtcgtaagg tatcccgcct cactcatcgg attgccaagc
     5881 tcggcagcta gagtgattac taggcgctcg ttcggttgca ggcgctgtgg attccatgcc
     5941 ggcgcataat ttcggcgccc ggaatgatgg caagcgttag accgcagtat tccgcatcca
     6001 acacttcata tccttaatgc ctcatcctgg ggcacactct tgcgcgagcc cgcaatccaa
     6061 agctaccggg agagaatccg gattcgcgac ttggcggtgg acggaacgac agaaacacgc
     6121 gttggtttag cgcactggta ttgactaccc gccgcgcacg cgtcgtttcg agtggctgct
     6181 gtcccggtgc gactttcggc gtttacaact gtggtcatac taagacggcc attcacgtca
     6241 tttctctcgt caattgttgt aaaaatatca caacacatta acaaaaacgt caccaatgct
     6301 ccgcggcccc cattttaagc ttgccagact tttgcacttt ggtcggattt cgcgtgacct
     6361 atccggaggt tacccgtaag aaacggacaa gaaaatctgc gtcgcgacaa agcgttaggg
     6421 cgtaagcgag atgccggggt tgggaaatga ccggcaccgg cccggcaggt gaaaattctt
     6481 tttgccacat ttggtggcat cttgccgtct ggacaaattc atggcgaatc gaattagaat
     6541 tgtgaattca attatttgcg gttgtcgccc cctgggcatg acaaaagtgc ggtgcgtaac
     6601 gcgactgtca agaagctgtc agcttgatgt cgcaagccac aggcgattgc gaggagattt
     6661 ccggcagtct atgttttcgt cgctgcacag agggcagcat ttagtaaaac atggcgtttg
     6721 cgttcgcagt gtatgaattt tggggcgctt cttcttgggc tgcgtaattt aaccccaaga
     6781 atgcgagcaa ctaaactgtc aatccaaaca cgctgggc
//
LOCUS       DATILV010000669         1778 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_412445, whole genome shotgun sequence.
ACCESSION   DATILV010000669 DATILV010000000
VERSION     DATILV010000669.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1778)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1778)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1778
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_412445"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            321..>1778
                     /locus_tag="VLJ17_15885"
     CDS             321..>1778
                     /locus_tag="VLJ17_15885"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HSV24494.1"
                     /translation="MPEERFDRRLAAIFAADVAGYSRLMGRDEEGTHAAFKSVRRSLF
                     DPKIEQHHGRIVKSTGDGALVEFASAVDAVRCAIEIQRGMAAHNNDIPADRRIEFRIG
                     INVGDIIIDEADIYGDGVNIATRLEALAAPGAICLSDNAYQQIKGTLTLEVSDMGEQQ
                     LKNIAQRVHVFGVRLDGAPARPALALPDKPSIAVLPFQNMSGDPEQEYFADGVTEDII
                     TDLSRFSQLFVIARNSSFIYKNKPIDLRQVGRELGVRYVLEGSIRRRGDRVRITAQLI
                     DAGTGVHRWAERYDRELKDVFAIQDELARTIAAVLAAHVNKAETERTLLKPPSTGQAY
                     DYYVRAAAAWASFLSSWKIDDLSETRRYLAESLSIDPKYARAYAMLSSSYRVAWLNPL
                     NDECLSPSALDQAIKLARTAIELDPSLPEAYAELGYNIIRKGEFDAATAAAEKATALN
                     PNFADYRVATVLVMVGEPIKAIEVAKAQMRLDPFYP"
BASE COUNT          388 a          500 c          492 g          398 t
ORIGIN      
        1 ccgctccggc ccgctgaaat cattctctca gggtcatttt tctctggagc tctgtacttc
       61 caccaaatag tacggatttt ctatcaccca gagactcagg cgatatgagc ccctcgcgtg
      121 acgacgagtt tgaatctcac ccggttgatc ggtttcggat gaaacgagcc tttgaatcgc
      181 caagacctcc ttctgcttgg agcaggggcg tccgactgat gtcgctttcg gcggtaaagc
      241 ggacattgac tgcgtcgatg gacacccacc aaggccgatc ataaactaag cggcgccgag
      301 atagatggcg agaccaagac atgcccgagg agcgttttga tcggcgattg gctgccattt
      361 tcgccgcaga tgttgccggc tacagccggc ttatgggtcg cgacgaggaa ggcacacacg
      421 cggcatttaa atctgtccgt cgctcgcttt tcgacccaaa aattgagcaa catcacgggc
      481 gtatcgttaa atcaaccggc gatggtgcgc tggtcgagtt tgctagtgct gtcgatgcag
      541 ttcgctgcgc tatagaaatt cagcgtggca tggccgcgca caacaatgac atcccagccg
      601 accgccgcat tgagtttcgc atcggcatca atgtcggtga catcatcatt gacgaggccg
      661 atatttacgg cgacggggtc aatattgcca ctcgcctcga ggctctggcc gcccccggcg
      721 cgatttgcct ttccgacaat gcgtatcagc agatcaaggg cacgctcacg cttgaagtca
      781 gcgacatggg cgagcaacag ctcaagaaca tcgcgcagcg agtgcacgtc tttggtgtgc
      841 ggctcgacgg cgcgccggcg cgcccggcgc tcgcgctgcc cgacaagcca tctatcgccg
      901 ttttgccctt tcagaacatg agtggcgatc cagagcagga atattttgcg gatggtgtca
      961 ccgaagacat cattaccgac ttgtcgcggt tttcccagct gttcgttatc gctcgcaatt
     1021 cgagcttcat atataagaat aagccaatcg atctgcgcca agtgggccgc gaactcggag
     1081 tgcgctacgt cctcgagggt agcattcgtc gccgtggtga tcgggttcga atcacggcgc
     1141 aattgattga tgctggaaca ggcgtccacc gttgggcaga gcgctacgat cgagaactga
     1201 aagacgtctt cgccattcaa gacgaactcg ctcgtacgat cgccgcggtt ctcgccgcac
     1261 atgtgaacaa ggcggaaacc gaacgtaccc tacttaagcc gccgtcgacc gggcaggcct
     1321 atgattatta tgtgcgcgcg gctgccgcct gggcttcgtt cctttcgtca tggaagatcg
     1381 acgatttgtc ggaaacgcga cgctatctag cggagtccct atcgattgat ccgaaatatg
     1441 cccgcgcgta cgcgatgcta tcaagcagtt acagggtggc gtggcttaat cctctgaacg
     1501 acgaatgttt gagcccttct gctcttgatc aagcgatcaa gttggcgcgc accgcgatcg
     1561 agctcgatcc gagcctacca gaagcctatg cggaattggg atataacatt attcgcaagg
     1621 gtgagttcga cgccgctact gctgctgccg aaaaagcaac tgcactgaac cccaattttg
     1681 ctgattaccg cgtcgcaacg gtgcttgtga tggtgggaga acccatcaaa gcaattgagg
     1741 ttgccaaagc gcaaatgcgc cttgatccgt tctatccg
//
LOCUS       DATILV010000670         3314 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4246336, whole genome shotgun sequence.
ACCESSION   DATILV010000670 DATILV010000000
VERSION     DATILV010000670.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3314)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3314)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3314
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4246336"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1079
                     /locus_tag="VLJ17_15890"
     CDS             <1..1079
                     /locus_tag="VLJ17_15890"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSV24495.1"
                     /translation="ARAQGRLVGIGVASSIEPGLTGPPMLALASPRIFSRTSSPEGIL
                     LRIDAFGKIIAELGFPIGGQSQHSFVRQILADYFGVELEDIQVITVDSLSMQPSTGPI
                     SSSMAIALSGAVLGAAARLTDKLKRAAAVMLEASADDVELFDGQFRVRGVPGKSLAVA
                     QVAQFMMARPDLLPEGVDGNPQASYVWNPPDRTIPDEKGFGRYSVTAAGAQHLCMVEV
                     DRETGQVKILKYVMVDDCGVRLNPSVVRGMLMGGMAHGIGTALLEEYVYDDQGQVLTS
                     SYMDYLMPTIMEVPAAEEHEMCTPSPIAPLGVKGVGEGALHTTPAAVLCAVNNALEPL
                     GVRITEAPMTPLRIWKALQARTSH"
     gene            1120..>3314
                     /locus_tag="VLJ17_15895"
     CDS             1120..>3314
                     /locus_tag="VLJ17_15895"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HSV24496.1"
                     /translation="MPRDLSELPLSQPRYLGKDTARVEDATLLTGRAEFGDNVAFPGM
                     LFAAILRSPHAHARIKRIDISKAQELAGVVAIVTGEDAKAWSEPVPGFPTGWAGHCLA
                     HDKVRFVGDPVAAVAATSRYIAEDALELIEVDYEILAPVIDAQKALDPDSPVIWEHQG
                     TNLIYHRVFTFGAIDEAFAKADVVVRDDFRWLRASGNPIETCNCIVQWRSDHSLNAWG
                     GFQGTGFYVGSVARGLRVPAHKIRITPLPHGGSFGTKIFPHAIIRMALLSRKAGGRHV
                     KWIEDRVEHLLSSYTHGPDRVYSAEMALTHEGEITGFRVKVLDDLGAHAVSVAIGKAL
                     KPLSAFTGPYRMRNAQYDLTVVATNKCPQGSYRGWGVPAHNLAMEHCVDLAARKLGLD
                     PVEIRRRNLLRPEQFPYEAPNGARYDSGDYERTLNLALDLAGYAALRRKQARARAEGR
                     LVGIGVYTGVELSAVAMSMFTLLGPDSPFGTSMPESARVRIDATGKIVCEVTFPWEGQ
                     GQHTFATNFLADYFGVKREDVEVIAVDSLSAGPGTGPIGSRQAVMLSGALLGAADRIA
                     EKLRKVAGVILEANTDDIELFNGQLRVKGSPEQTLPLQRVITVMLTRSDLLPQGVDGN
                     PEASYTYNPPERKLPDAEGRGSFDLTAANNGHVVMVEVDRDTGQVQVLKYVIADDCGV
                     RLNPAVVEGMIQGAVAQGVGQTVLEEHVYDENGQYLTSTFMDYLLPTIW"
BASE COUNT          658 a          944 c         1038 g          674 t
ORIGIN      
        1 cggcgcgcgc tcaaggacgg ttggtcggca tcggcgtcgc cagcagcatc gagcccggtc
       61 tcactggacc gccgatgctg gcgctggctt cgccgcgcat ttttagtcgc acatcgtcgc
      121 cggaggggat actcctgcgc atcgatgcgt tcggaaaaat catcgccgaa ttgggttttc
      181 cgatcggagg ccagagccaa cacagtttcg tacggcagat tctcgccgac tatttcggtg
      241 ttgagctgga agatattcaa gtgatcaccg tggacagttt gagcatgcag ccaagcaccg
      301 gcccgatctc cagctccatg gcaattgcgc tttccggcgc ggtgcttggg gcagccgcgc
      361 gcctgacgga taagttaaag cgcgccgccg ccgtgatgct ggaagccagc gcggatgacg
      421 tcgagctgtt tgacggacag tttcgcgtgc ggggcgtgcc gggaaaatcg ctcgcggtgg
      481 cgcaggtggc gcagttcatg atggctcgtc ctgacttgct cccggagggt gtcgacggca
      541 acccgcaggc gagctacgtg tggaacccgc cagatcgcac gatcccagat gaaaaaggtt
      601 ttggccgcta cagcgtcacc gcggccgggg cccagcacct ctgcatggtt gaagttgatc
      661 gcgagaccgg acaggtcaaa attctcaaat acgtcatggt cgatgactgt ggcgtgcggc
      721 ttaatcccag cgtcgtgcgc ggcatgctga tgggcggaat ggctcatggc atcggtactg
      781 ctttgctcga ggaatatgtt tatgacgatc aggggcaagt gctgacatca tcctacatgg
      841 attatctaat gccgacgatc atggaagtcc cggcggctga ggagcatgag atgtgcacgc
      901 catcgccgat cgcccccctt ggggttaagg gagtcggcga aggcgctttg catacgactc
      961 cggctgcggt gctctgcgcg gtcaacaacg cgctcgagcc tctcggcgta cgcattaccg
     1021 aggcgcccat gactccgctt cggatatgga aggcgttgca ggcaaggacg agccattaaa
     1081 cgagagaatg aataaaggtt gatcgacttg agcgagaaag tgccacgaga tctgagtgag
     1141 ctgccgctgt cccagccgcg ctacctgggc aaagacacgg cgcgcgttga ggatgcgacg
     1201 ctgctcaccg gcagagcaga attcggcgat aacgtcgcgt ttcctggaat gctgttcgcg
     1261 gcgatcttgc gcagcccgca tgcacacgcg cgcatcaaac ggatcgacat ttccaaggcg
     1321 caagaacttg ctggtgtggt ggcgattgtc actggtgagg atgccaaggc ttggtctgag
     1381 cctgtccccg gctttccgac tggttgggcg ggccattgcc tcgcgcacga taaagtcagg
     1441 tttgtcggcg atccggtcgc cgcggttgcg gccacgagcc gttacatcgc cgaggacgcc
     1501 cttgaattga tcgaggtcga ctatgaaatt ctcgcgccgg tcatcgatgc gcaaaaggca
     1561 ctcgatccgg acagcccggt catctgggag caccaaggaa ccaacctcat ctaccatcgt
     1621 gtatttactt ttggcgcgat cgacgaggct tttgccaaag cggacgtcgt tgtcagagac
     1681 gattttcgct ggcttagggc cagcggcaat ccgatcgaga cctgcaactg catcgttcag
     1741 tggcgttccg atcattcgct caacgcttgg ggcggtttcc aaggtaccgg cttttacgtt
     1801 gggtcggtgg cgcgcggcct gcgggtgccg gcgcacaaga ttcgcattac gccgctgccc
     1861 cacggcggct ctttcggcac caagattttt ccccacgcga ttatccgtat ggcattgttg
     1921 tcgcgcaagg ccggcgggcg ccatgtcaaa tggatcgagg accgggtcga gcacttgctg
     1981 agcagctaca cgcacgggcc ggaccgcgtc tactcggcgg aaatggcgct gacgcatgaa
     2041 ggcgagatta ccggctttcg cgtcaaagtg ctcgatgatc tcggcgccca tgcggtctcc
     2101 gtagcgatcg gcaaagcgct caaacctttg tcggcattca ccggccctta ccgcatgcgc
     2161 aacgcgcagt atgatctcac ggtggtggcg accaacaagt gtccgcaggg ctcttaccgc
     2221 ggctggggtg tgccagctca taacctggcg atggaacatt gcgtcgatct ggcggcgcgc
     2281 aaactgggac tcgatcccgt cgagattcgc cgccgtaatt tacttcgtcc tgaacaattt
     2341 ccctacgagg cccccaacgg cgcgcgttac gacagcggcg attacgagcg cacgttgaat
     2401 ctggcgctgg atctcgccgg gtatgccgcg ctgcgccgga aacaagcgcg cgctcgggcg
     2461 gaaggccgcc tggtgggtat cggcgtttac acgggtgtcg agctcagcgc ggtggcgatg
     2521 agcatgttta ccctgcttgg tcccgattcc ccgtttggca cctcgatgcc ggagagcgca
     2581 cgggtgcgca tcgatgccac cggaaagatt gtctgcgaag tgacttttcc gtgggaaggt
     2641 cagggacaac acacgtttgc caccaatttt ttggccgatt acttcggcgt caaacgcgaa
     2701 gacgtggaag tgatcgcagt ggacagcctc tccgccggtc cgggcacagg acccatcggc
     2761 agccgccaag ccgtcatgct ctcgggcgca cttttgggcg ccgccgatcg gatcgcggag
     2821 aaattgcgca aggtggcggg tgtgattttg gaagccaaca cggacgatat cgaacttttc
     2881 aatggccaac taagagtgaa aggctccccg gaacaaactc taccattgca gcgggttatc
     2941 actgtcatgc tgacccgctc ggatctcttg cctcaaggcg tcgacggtaa tcctgaagcg
     3001 agttacacct acaatcctcc ggagcgcaaa ttgccggatg cggagggacg cggcagcttc
     3061 gatctgacag ccgccaacaa cggccatgtt gtcatggtag aggtggaccg cgacaccgga
     3121 caggtgcagg tgctcaaata tgtcatcgcc gatgactgcg gcgtcagatt gaatcccgct
     3181 gtcgtagaag gcatgattca gggcgccgtg gcgcaaggag tgggacagac agttctcgaa
     3241 gaacacgttt acgacgaaaa tggccagtac ctcacgtcga cgtttatgga ttatttactg
     3301 ccgacgatct ggga
//
LOCUS       DATILV010000671         4038 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_5012990, whole genome shotgun sequence.
ACCESSION   DATILV010000671 DATILV010000000
VERSION     DATILV010000671.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4038)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4038)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4038
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5012990"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1161..2060
                     /gene="trxA"
                     /locus_tag="VLJ17_15900"
     CDS             1161..2060
                     /gene="trxA"
                     /locus_tag="VLJ17_15900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HSV24497.1"
                     /translation="MNVGVAAPPADALVRNTTTQTFKKDVIDESRQQPVLVDFWAPWC
                     GPCKQLTPILERAVRSAKGTVKLVKMNIDEHPAIPGQMGIQSIPAVIAFVNGQPVDGF
                     MGALPESQVTAFLERLTKQEIRNEEKELLKSADAALLAGDPTEAAELYSEILAGDPTN
                     VHALAGLARCYLQSGNIEQAKHTLAQVPEAKRNETAVAAARAALEVAEQAVHLGPVAE
                     LEQKVAANPLDHQARFDLAIALNGNNRRQEALDHLIEIVRRDRKWNEDGARKQLVQFF
                     EAWGPTDEHTVAGRRRLSSILFS"
     gene            2150..2824
                     /locus_tag="VLJ17_15905"
     CDS             2150..2824
                     /locus_tag="VLJ17_15905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007604110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HSV24498.1"
                     /translation="MPMNAVYRGPADLPRTIPVFPLPGALLLPRGQMPLNIFEPRYLE
                     MVDDALRDGHRLIGMIQPDPAHPGPEDRPNLYKIGCVGRITQFAETGDARYLLQLTGV
                     ARFRIVVELKVATAYRQCDVDFTPFIDDFTARKGEELVDRKAVLAALTSFLKANNLKA
                     DWQGIESAPNEALVNALAMMSPYDPAEKQAMLEAPDLKTRAEILIAVTEIALAKSRTE
                     GDPPLQ"
     gene            2921..3121
                     /locus_tag="VLJ17_15910"
     CDS             2921..3121
                     /locus_tag="VLJ17_15910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HSV24499.1"
                     /translation="MNSTSTDRPASTVDPKLLEILVCPLTKGPLEYDAEKQELISRSA
                     KLAYPIRDGIPIMLPEEARQLE"
     gene            3229..3855
                     /locus_tag="VLJ17_15915"
     CDS             3229..3855
                     /locus_tag="VLJ17_15915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HSV24500.1"
                     /translation="MLNIWGRKTSSNVQKAMFAIGELKLPHQRVDIGGPFGKNKEPAY
                     LAMNPNGLVPTLEEEDGFLLWESNSIIRYLAAKHGVGTLEPLDPHARALASKWMDWQL
                     SVIGPALTPVFWGLIRTPAQERDHKAIADGKIKTTAAVKILDEQFAKTPYAAGDTFSM
                     GDIPIAIMSYRYRELVPERPAFPHFERWYAAIAARQAFRDHVSSIPLT"
     gene            complement(3877..>4038)
                     /locus_tag="VLJ17_15920"
     CDS             complement(3877..>4038)
                     /locus_tag="VLJ17_15920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018323568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-octaprenyl-6-methoxyphenyl hydroxylase"
                     /protein_id="HSV24501.1"
                     /translation="LNRLFSNRSDVLRLVRDLGLGVVDRLPALKRLFIQEAAGLVGEV
                     PKLLRGEAL"
BASE COUNT          850 a         1194 c         1189 g          805 t
ORIGIN      
        1 ctctttggtc gcgtcctact tcgcggcttc atgcggcggg gcaccgctct cggtcatcgc
       61 cgagtacatc aaatctcaaa gggagacgcc gcttcctccc cggcctctac gccggggttt
      121 ccgcggcgcg gtttagatga atagggggtg tggaactcga cacggctaag ctgcgtttaa
      181 gttcctatgg gtgctgggag agatgatctg acgagcagct tctatctgca catcatgcgc
      241 gccagcattg gcgcggtgct gagagcagag cctattttac acgaaccgct ccccgaccga
      301 cttgcagagc tgttgaagga gctcgagaag gaacttgatg ggcctatgga ggccagtcct
      361 attcggacgg atagcgacaa tgcgtcgtga accacacaca acgcgtgcca gagtgtgttc
      421 ccgctgggag aggggatgtc ttggtgagta gttaccacga aggctaaacg ttgttgtcag
      481 gtgtgccaga gtctgcggtc gcggtctgat tggcagtacc gccgccacct gatgtatctc
      541 gaaaccgtga tgcgtgcggt tgacgaactt gtcgtgccgc caccaggtca ttgcctgcag
      601 ttgatccgcg tgagccaccc gatgtggcga cgggcgaaag tgggggtgac caggttgaga
      661 aacaccgggt gattatgtcc cggcatctcg cgtcgcccgc actgtgccac ttcgacctta
      721 cggtgcgcac gaatgcgcaa gccgcgatgg aacagatcgt caaacccgac atcggagggg
      781 cttgcgctgc tgcgcgaagc ttccgaggcg cctttccgcc aggggctacc tgcgggtggc
      841 accctcgcgg acctcgcgag gacgcgccgg cgtccgcctg gccgacacct taccgggcgc
      901 cgacacgtta cgccgggcgg agacaccgtt tcggcgggtg cagatctcgt tttgttctct
      961 gaggccgtgt gaccgtggtg ctcgacaccg caatattggc cgactaacta aggcggtcat
     1021 cagtcagcgt tgaattcgct ctggggccgg ctcctgcctg aacgctgtaa agaggcgatt
     1081 gcaatcaagt cgttgctccc catttaatcc gggtctagtt gagctcctgc cttaacaccg
     1141 gatgaagaaa ggtcgattgg atgaatgtcg gggttgcggc gccgccagcc gatgctcttg
     1201 taaggaacac cacaacgcag accttcaaga aggatgtgat cgacgaatca cggcagcagc
     1261 cggtccttgt ggatttttgg gcgccgtggt gcggaccgtg caagcagctc acaccgattc
     1321 tggaaagggc ggtgcgttcg gccaaaggca cagtcaagct ggtgaagatg aatattgacg
     1381 aacatccggc cataccaggg cagatgggga tccaatccat cccggcagtc attgcctttg
     1441 tcaacggcca acccgtggac ggtttcatgg gggctttgcc agaaagtcag gtgaccgctt
     1501 tcttggaacg gctgaccaag caggagatcc gcaacgagga aaaggaactc ctcaagtcgg
     1561 ccgatgccgc actgttggct ggagatccga cggaggcagc ggaactatat tccgaaattc
     1621 tcgccggcga cccgaccaat gtccacgcgc tcgccggcct tgcgcggtgc tatttgcaga
     1681 gcggcaacat cgaacaggct aaacacacct tagcacaggt gccggaagcc aaacgaaacg
     1741 aaaccgcagt ggcggcagcc cgcgctgcgc ttgaagttgc cgaacaggct gtgcatcttg
     1801 ggccggtcgc cgagctagag cagaaagttg ccgccaatcc actcgatcat caggcgcgct
     1861 ttgatcttgc aatagcactg aacggcaaca accgtcggca agaggcgctc gatcatttga
     1921 tcgagatcgt gcgccgcgac cgaaagtgga acgaagacgg tgcccgcaag cagctggttc
     1981 aattcttcga ggcctggggc cctactgacg aacatacggt cgcaggtcga cggcggctgt
     2041 cgtcgatcct gttttcctaa tcggcattcc tttggcgcat cggtatgtcg atagggccga
     2101 accgtagtcg aaggaccacg tggtgcgtta tccaatttgg agtgcggcga tgccgatgaa
     2161 cgcggtctat cgcggtcccg ccgacctacc tcggacgata ccggttttcc ccttgcccgg
     2221 agcgctgctg cttccacgtg ggcaaatgcc gctcaacatc ttcgagccac gttatcttga
     2281 gatggtggat gacgccctgc gcgacggcca ccgcttgatc ggcatgattc aacctgatcc
     2341 ggcgcatccc ggccccgagg atcgacccaa tctctacaag atcggctgcg tcggccgtat
     2401 cacccaattc gccgaaaccg gagatgctcg ctatctgctg cagcttaccg gcgttgcccg
     2461 ttttcgcata gttgtggaat tgaaggtggc gaccgcctat cgccaatgcg atgtcgactt
     2521 tacgcctttc attgacgatt tcacggcccg caagggcgag gaactggttg accgcaaggc
     2581 ggtgctggcg gcgctgacat cgtttctcaa ggcgaataat ctcaaagccg actggcaggg
     2641 aatcgaaagc gctcccaatg aggccctcgt taacgcgctc gccatgatgt cgccctatga
     2701 ccctgcggag aagcaggcga tgttggaagc ccccgacctg aagacccgtg ccgagattct
     2761 gatcgctgtc accgaaatcg ccctcgccaa gagccgcacc gagggtgacc cgccactgca
     2821 atagccgcgc gcagcgcgtc aggcgttttc atccgtcttg aatagcggtc aaaaaatcgg
     2881 gataacttgt ctatctcgcg tgatgccttt ggaccgtacc atgaattcca catcgaccga
     2941 ccgtcccgca agcaccgtag accccaagct tctggaaatt ttggtctgcc cccttaccaa
     3001 gggaccgctt gaatacgatg ccgagaagca agagctgatt tcgcggtccg ccaagctcgc
     3061 ctatccgatc cgcgacggca ttccgatcat gctgcccgag gaagcacgtc aactcgagta
     3121 gttccaccct cttgtgcagg cggggaaggt aaggcgggta gcccatccaa tcgccatgac
     3181 gtcccgtcaa atcatcgcac caagcccgcc cgatttacgg aaaagaaaat gctgaatatc
     3241 tggggaagga agacatcctc gaacgttcaa aaggcgatgt ttgccattgg cgagttgaaa
     3301 ctcccgcatc agcgcgtcga catcggcggc ccgttcggca agaacaaaga gcctgcttac
     3361 cttgctatga accccaatgg actcgttccg accctcgaag aggaggacgg ttttctgttg
     3421 tgggaatcaa actcgatcat tcgctacctc gctgccaaac acggtgtcgg cacgttggag
     3481 ccgttggacc cgcatgcccg tgcgctcgca agtaagtgga tggattggca gctctcggtg
     3541 atcggtcctg ccctcacacc ggtattctgg ggcttgatca gaacgcccgc ccaagagcgc
     3601 gaccacaagg cgatcgccga cggcaagatc aagaccaccg cggcggtgaa gattttggac
     3661 gagcagtttg ccaagacgcc ctatgcggcc ggcgatacgt tttctatggg cgacattccg
     3721 atcgccatta tgtcctaccg ctatcgcgaa ttggtgcccg agcgcccggc gtttccgcat
     3781 ttcgagcgct ggtacgcggc tatcgcggca cggcaggcat tccgcgatca tgtgtcgagc
     3841 atcccactga catgaacggc ggccggcgtc ctgacgtcac aaggcttcac cacgcaatag
     3901 ttttggtact tcacccacga gtcctgcagc ctcctggata aagagacgct tgagcgccgg
     3961 caaccgatcc accacgccaa ggccaagatc gcgaacaagc cgcagcacgt cagaccggtt
     4021 tgagaacagg cggttcag
//
LOCUS       DATILV010000672         2396 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1693569, whole genome shotgun sequence.
ACCESSION   DATILV010000672 DATILV010000000
VERSION     DATILV010000672.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2396)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2396)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2396
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1693569"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..512
                     /locus_tag="VLJ17_15925"
     CDS             <1..512
                     /locus_tag="VLJ17_15925"
                     /inference="COORDINATES: protein motif:HMM:NF025871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="iron-containing redox enzyme family protein"
                     /protein_id="HSV24502.1"
                     /translation="QQMDLLRFVYRHANEELGHEQMVVTDVRSLGLDHPGMWDEPPLP
                     PTQALISYLYYVALEMGAIARLGYSYWAEDAYDHIGPLLFTARRDLRLSDRNMTFFVA
                     HSKIDAKHSVEVREMIERHATTEKHQDAVAQVAETSLYLTGAILDGVAHAYRKLSETS
                     QDRPAVSTL"
     gene            509..1189
                     /locus_tag="VLJ17_15930"
     CDS             509..1189
                     /locus_tag="VLJ17_15930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24503.1"
                     /translation="MKDTPSLLLPLEDRTLQFGPVRTASQLLEVQSLRYQQYQARTPD
                     VVPELLRDFEFDRRGFVFLLRDRSRPVATGRIIRVDSGVIALHHLAALPQPILRDPKV
                     CEISRLAALAAGGTLLAFGTAMFGLGLGASWALQHTPFERYVAYCQVAFLKLYTKVKA
                     HPCSEEFTLPNREERRFLLVEGRLEDAAEACSTMLSRYHIEPLTEDPYIQPPQRTPKQ
                     EMPCEIGF"
     gene            1171..>2396
                     /locus_tag="VLJ17_15935"
     CDS             1171..>2396
                     /locus_tag="VLJ17_15935"
                     /inference="COORDINATES: protein motif:HMM:NF016145.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide pyruvyl transferase family
                     protein"
                     /protein_id="HSV24504.1"
                     /translation="MRNRILICGYHGMRNTGADARLLAIRDAVCALVPTAEIVVPSVH
                     PTNLRYVENVTHTTFHPATYPWALKRHIENTDLMILSEGNMLTDEFSAHLMKAFVTAI
                     FQAKSFDRPIVGMALDSGKLDRKYQPRVCDALNATSLLTVRSAGAKTALQEMGVKRPL
                     EVTADCAVSMRLLSDEETQRVRREAGLDGEGAVHGIAPVDFYMWPARISLFGRKDDYV
                     RYPFRGTWPDGGRARSETLANQWAAFCDFLLRQDPKARVALISMEAVDERFCRKIRER
                     LAAPERTLALSCTALTPKRMSACLGALSSLVTSRYHALLLSMAHAVPYIALGHDTRTK
                     FISEELGLAEYYLSHANPNLLETLIDTHNQLLKDAERSRELIRRGMTELRAKDRRNYE
                     LLGQLLDDMGYRVNGLP"
BASE COUNT          501 a          695 c          716 g          484 t
ORIGIN      
        1 ctcagcaaat ggatttgttg cgcttcgtat accgtcatgc caacgaagag ttgggtcatg
       61 agcaaatggt cgtaacggat gtccgatcgc tggggctgga ccatccaggc atgtgggatg
      121 agccgccgct gccgccgaca caggcactga tcagctacct ctactacgta gcgcttgaaa
      181 tgggagcgat cgcaaggctc ggctacagct attgggccga agatgcgtat gaccatatcg
      241 gtccgctgct gttcaccgca cgccgggatc tcagattgag cgaccgcaac atgaccttct
      301 tcgtcgcgca cagcaagatt gatgcgaagc actcagtcga agtccgggaa atgatcgaac
      361 gccatgcaac aactgaaaag caccaggacg ccgtggcgca ggtcgccgag acgtcgttgt
      421 acttgaccgg tgcgatcctc gatggtgtgg cacacgcgta tcgcaaattg tccgaaacgt
      481 cgcaagacag gcccgcggtt tcgacgctat gaaagacaca ccatcattac tattgcctct
      541 tgaagacaga acactgcaat tcgggccggt ccggaccgcc agccagttgc tcgaagtgca
      601 gtcgctgagg tatcagcagt atcaagcccg tacacccgat gtggtgcccg agctgttgcg
      661 ggatttcgag ttcgaccggc gcggcttcgt ttttctttta cgcgatcgat cgcgtcccgt
      721 ggcaacaggc cgcatcatcc gggtcgattc gggtgtgatc gcgctgcatc atctggcggc
      781 cctacctcaa cccatcttga gggaccccaa ggtatgcgag atctcgcgcc tggcggcact
      841 ggccgcgggc gggacgttgc ttgctttcgg cacagcaatg ttcggattgg gattgggggc
      901 gagttgggcc ttgcaacaca cgccgttcga gcgctacgtc gcctattgcc aggtcgcgtt
      961 tctcaagttg tatacaaagg ttaaggcaca tccctgcagc gaagaattca cgctgccgaa
     1021 tcgcgaggag cggcgatttc tgctcgtcga aggcagactc gaagatgccg cagaagcctg
     1081 cagcaccatg ctctccaggt atcatatcga acctctgacc gaggatcctt atatccaacc
     1141 accacagcgc acaccgaagc aggagatgcc atgcgaaatc ggattttgat ctgcggctat
     1201 cacgggatga ggaataccgg cgctgatgcc cgcctcctgg caattcggga tgcagtgtgt
     1261 gccctggtcc cgaccgctga gatcgtcgtg ccatcggtgc acccgacgaa tttgcgctac
     1321 gtggagaatg taacgcatac gacgtttcac ccggctacat atccgtgggc cctcaagcgg
     1381 catatcgaga ataccgatct gatgattctc tccgaaggca acatgttgac ggacgagttc
     1441 agtgcccatc tcatgaaagc ctttgtgacc gcgattttcc aggcgaaaag cttcgatcgc
     1501 ccgatcgtcg gtatggcgct cgactccgga aagctcgacc gcaaatatca accgcgggtg
     1561 tgcgatgcat tgaatgccac cagcctgctg accgtccgat cggcgggcgc aaaaacggcg
     1621 ctgcaagaga tgggggtcaa gcgcccattg gaggtgaccg cggattgtgc cgtctcgatg
     1681 cgcctgttgt cggacgaaga aacgcaacgc gtacggcgcg aggccgggct cgacggggag
     1741 ggcgcggtgc acggaatagc gccggtcgac ttctacatgt ggccggccag gatttcgctg
     1801 ttcggccgca aagatgacta tgtccgctat ccgttccgtg gaacctggcc ggacggcggt
     1861 cgcgccagga gtgagacgct cgcgaatcaa tgggcggcgt tttgcgattt cttactgcgc
     1921 caggatccga aggcgcgcgt tgcactgatc tccatggagg cggtagatga gcgcttttgc
     1981 cggaagatcc gcgaacggct cgccgcaccg gagcgtacac tggcgctgag ctgcacggcg
     2041 ctgacgccga agcgcatgag cgcgtgcctc ggcgcactat cctctctggt cacgtcgcgt
     2101 tatcacgcgc tgctgctgtc gatggctcat gccgttcctt atatcgcgct tggtcacgat
     2161 acgcggacga agttcatatc cgaagagctg ggcctggcgg aatattattt gtcccacgct
     2221 aatccaaatc tgctggaaac gctcattgac acgcacaacc aacttctcaa agacgcggag
     2281 cgatcgcgtg agctgatccg ccgcggcatg acggaactcc gcgccaagga ccggcgaaac
     2341 tacgagttgt tgggacagct cctcgatgac atgggctacc gggtcaacgg cctgcc
//
LOCUS       DATILV010000673         4449 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3229767, whole genome shotgun sequence.
ACCESSION   DATILV010000673 DATILV010000000
VERSION     DATILV010000673.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4449)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4449)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4449
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3229767"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..301
                     /locus_tag="VLJ17_15940"
     CDS             <1..301
                     /locus_tag="VLJ17_15940"
                     /inference="COORDINATES: protein motif:HMM:NF024812.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSV24505.1"
                     /translation="IAGFAVQQGQKLAHKGILWGMYVRPAARRASVGRRLVEAICNLA
                     RQHVELIQLSVVQDNEQARSLYAKLGFLEYGVEKNALKQDGRYYDEVLMAKDLLG"
     gene            complement(510..1286)
                     /locus_tag="VLJ17_15945"
     CDS             complement(510..1286)
                     /locus_tag="VLJ17_15945"
                     /inference="COORDINATES: protein motif:HMM:NF024809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HSV24506.1"
                     /translation="MEHPLLWHIPLSHYNEKVRWALDYKSIAHHRRVLGPDYLIRAWR
                     ATGQGKLPILWLDGHAIADSTRIIAALEERFPVPALYPRDAIARQRALALEDDLDETL
                     GPSVRAAIMSPLFREDPDIALRVLTTGMPDRAYRRLRSLLLIFPTYYRFRHKISDANL
                     EKDRASVAAALDRIEQQLQGREYLVGHTFTIADLTVASLLAPVLQPPGIQYPLRVQLP
                     SYVQQYRATLLKHPAAQWANGIYRLHRGRSAETPMLAPPV"
     gene            complement(1299..3065)
                     /locus_tag="VLJ17_15950"
     CDS             complement(1299..3065)
                     /locus_tag="VLJ17_15950"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HSV24507.1"
                     /translation="MEKPAAAALDAVTLEVIRNALPAIANEMAVDLQRTSYNMMIYEV
                     RDFCTALVDPEGRLISQNVGGVSHFVADLGVIIADGMRRYGRDGFKPGDVIITNHQAV
                     AGQHLNNVVIYMPHFYRGELLLFTMVRAHWIDVGGMSTGFGAGPTVADPWMEGLQLDQ
                     LKIYEAGKLNETLHRVLKDNIRFPESSLGDMKSQMAACRLASRRVDELFDKYGKDTIF
                     QAIIRIFEETEAKCRNVVSGLADGTYEAEAAIDDDGLKRDEPVRVHARVTIAGSAMTI
                     DLSGCSGERRAAINSRTLAGARVAYKALTGPLDPVNEGSFRALEVIIPEGNIMMARFP
                     APMSGWSAIVPIVVDTIVAALAKAMPDKVPAGHHGLLGGAVVFFGVNPNSHRRFIVQS
                     LEGGGWGGRPGEDGESATVSVCQGDVRNGSIEGIELKCPVLVESRALRQGSGGAGTYR
                     GGLGIDVRVRNLVEGKWNFEQTRRRNCPPYGLWGGKPGAYGDYLLRLYGETEFKSMAA
                     SHHLVPARSEVIVRTGGGGGWGDPLARDPEHVRSDVVEEFVPGSSARDDYGVVLRDDL
                     SVDLEATQRLRAAMRVTSRKLA"
     gene            complement(3065..>4449)
                     /locus_tag="VLJ17_15955"
     CDS             complement(3065..>4449)
                     /locus_tag="VLJ17_15955"
                     /inference="COORDINATES: protein motif:HMM:NF014071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HSV24508.1"
                     /translation="LKSSLGDIGFRGNLSIMRSNGGVMTPEVATARPAAMMESGPVGG
                     IIAAAQIGRQLGCADVISFDMGGTTAKASLVRRGEPTMSPGYYVGGYASGHPVMLPMI
                     DVVEVGAGGGSIAWLDEVGALKVGPQSAGADPGPICYGSGGTEPTITDANVVLGRLDP
                     DNFLGGQMKLDADAARRGIVQRIADPLKMDAVAAAQAVVEIAIAKMSLAVREVSVAKG
                     YDPRDFALVASGGAGPLHVRAIARELHIPKVIIPMFPSHFSALGMLLADERHDFIRTF
                     YSDLANADFAKLVAVHDEMAAEAAAALRHAKDAVRRVDLDIRYVGQEFTLPVPVDRAD
                     LIAADQHRIRAAFDALYDQRYAHHSPDEPVEIVNIRVAVLGKRTKISFPRLRDRGGAK
                     PARHREVYFSDPRKAVTCPVYAREELAAGSTIEGPTLIQEHGTTTVLFATDRCTVAPS
                     GELIIEVGGT"
BASE COUNT          865 a         1408 c         1366 g          810 t
ORIGIN      
        1 cattgccggc ttcgccgtcc agcagggcca gaaactagct cacaaaggca tactttgggg
       61 catgtacgtt cgacctgccg caaggagggc gtcggtcggt cgccggctag tcgaagcgat
      121 atgtaatctc gcacgtcaac acgttgagct catccaactc agcgtagtgc aggacaatga
      181 gcaggcacga agcctatacg cgaagctggg ctttctggag tacggcgtgg agaagaacgc
      241 cctaaagcaa gacggtcgct actacgacga ggttcttatg gcgaaggatt tattgggata
      301 atcccccagc ctgggcccga ggccgaaatg cctgatcaac ccgagcaatc ccggtcgttg
      361 gggccgaccg gacgatgttg gcatcggcga ttttcgacgc tactgaccgc agctgacgtt
      421 cggtaagtcg cgagcgccta tctgacaagt gcccccgggc ggggtttccg ccgcacgcga
      481 atatgcagcg ttcagactgg tcctaatctt tacactggcg gggctagcat gggagtttca
      541 gccgagcgtc ctcgatggag gcggtaaatc ccgttcgccc actgtgcggc gggatgtttt
      601 agcagggtcg cacggtactg ttgcacataa gacggcaatt ggacgcgcaa tggatactga
      661 atgcccggcg gttgcagcac cggcgccagc aacgaggcaa cggtgagatc cgcgatcgtg
      721 aaagtatggc cgacgagata ttcgcggccc tgcagctgct gctcgatccg gtctagcgct
      781 gccgcaacgc tggcacgatc cttttccagg ttggcatcac tgattttgtg gcggaaacga
      841 tagtaggtcg gaaaaatcaa cagtagcgac cgcagccggc gatacgccct gtcgggcatg
      901 cccgtcgtca acacgcggag tgcaatgtct ggatcctcac ggaacaacgg tgacataatg
      961 gcggcgcgca ccgatgggcc aagcgtctca tcgagatcat cctcaagtgc aagcgcgcgc
     1021 tgacgcgcga tagcgtcccg aggatatagt gccggtacgg ggaatcgctc ctctagcgcg
     1081 gcaatgatcc gcgtggaatc ggcgatagcg tggccatcga gccagaggat gggtagcttg
     1141 ccctggcccg tcgcgcgcca ggcgcggatc aagtagtctg ggccgagaac gcgtcggtgg
     1201 tgcgctatgc tcttgtagtc aagcgcccaa cgcacctttt cgttatagtg cgagagcgga
     1261 atgtgccaca gcagcggatg ctccatgatc ccttctgttt acgctagctt acgtgacgtc
     1321 acacgcatgg ctgcccgcaa ccgctgcgtc gcctcaaggt cgaccgacag atcgtcacgt
     1381 aacaccacgc cgtagtcatc tcgggcggac gaaccaggga caaactcctc gaccacatcg
     1441 ctgcgcacgt gttcgggatc ccgcgccagt ggatcgcccc atccgccgcc accaccggtg
     1501 cgcacgataa cttccgaccg cgccggcacc aaatgatggc tggccgccat ggatttaaat
     1561 tccgtctcgc cgtacaggcg caatagatag tcgccatatg cgccgggctt gccgccccac
     1621 aggccgtagg gcgggcagtt gcgtcgccgc gtctgctcga agttccattt gccctcaaca
     1681 agattgcgca cccgcacgtc gatgccgagg ccaccacgat acgtgcctgc gccgcccgag
     1741 ccctggcgca gtgcgcggct ttccacgagc accgggcatt tgagctcgat gccctcgatc
     1801 gacccattgc gcacgtcgcc ctggcatacc gacacggtcg cggactcgcc gtcctcgcca
     1861 ggtcggccgc cccagccgcc gccctcaagg ctctgcacga tgaatcggcg atgggaattg
     1921 ggattgacgc cgaagaacac gacggcgccg cctaagagcc cgtgatgccc ggccggcacc
     1981 ttgtcgggca tcgctttggc gagcgccgcc acaatggtgt cgaccacgat gggcacaatc
     2041 gcactccagc ccgacatcgg cgccggaaac ctcgccatca tgatgttgcc ttccgggatg
     2101 atcacttcga gggcgcggaa cgagccttca ttgacggggt cgagcgggcc ggtcaacgcc
     2161 ttataggcaa cgcgcgcgcc cgcgagcgtg cgtgaattga tggcggcacg ccgctcgccg
     2221 gaacacccgg acaaatcgat cgtcatggcg ctgccggcga tcgttactct ggcatgaacg
     2281 cgcaccggtt cgtcgcgctt gaggccgtca tcgtcgatcg cagcttccgc ctcgtaggtc
     2341 ccgtccgcca agccggatac gacgttgcgg catttggctt cggtctcctc gaagatgcgg
     2401 atgatcgcct gaaagatcgt gtccttgccg tatttgtcga acagttcgtc gacgcgtcgc
     2461 gacgcgagcc ggcatgcggc catttgcgat ttcatatcgc cgagcgatga ttccggaaac
     2521 cggatattgt ccttgaggac gcgatggagc gtctcgttga gcttgcctgc ctcatagatc
     2581 ttgagctggt cgagctgcag cccttccatc caaggatccg ccaccgtggg gccagcacca
     2641 aacccggtgc tcatgccacc gacgtcgatc caatgcgctc gcaccatggt gaacaacagc
     2701 aattcgccac gatagaagtg cggcatgtag atgacgacgt tgttgagatg ctgccccgcc
     2761 accgcctgat gattggtgat gataacgtcg cctggcttga atccgtcgcg accatagcgc
     2821 ctcatcccgt cagcgatgat gacgccgaga tcggcgacga agtgggagac gccgccgacg
     2881 ttctgcgaga tcaaccggcc ttccgggtcc acaagcgctg tgcagaaatc ccgcacttcg
     2941 tatatcatca tattgtagga ggtgcgctgc aggtccaccg ccatttcatt ggcgatggcg
     3001 ggcaaagcat tgcgaatgac ctcaagtgtc acggcatcaa gggcggctgc tgcgggtttc
     3061 tccatcacgt gcctcccacc tcaatgatca attcgcccga cggcgccact gtgcagcgat
     3121 cggtggcaaa cagcaccgtc gtggtaccat gctcctggat cagtgttgga ccttcgatcg
     3181 tgctgccggc ggcgagctct tcgcgcgcgt agaccgggca cgttacggct ttgcgcggat
     3241 ccgaaaaata tacctcgcga tggcgcgctg gcttggcgcc gccacggtcg cgcaggcgcg
     3301 ggaacgaaat cttggtccgt ttgcccagga ccgccacccg gatgttgacg atctccactg
     3361 gctcgtcggg cgagtggtga gcgtagcgct ggtcgtaaag tgcatcgaat gccgcgcgga
     3421 tgcgatgctg atcggcagcg atgaggtccg cgcgatcgac cggtaccggc aaggtgaact
     3481 cctggcccac atagcgaatg tcgagatcga cgcgccgcac cgcatccttg gcatgacgca
     3541 gcgcggccgc ggcttccgcc gccatctcgt catggacggc aacgagcttg gcaaaatccg
     3601 cgttggcgag gtcggaataa aaggtgcgga tgaagtcgtg tcgctcgtct gccagcagca
     3661 tgccgagcgc agaaaaatgc gaagggaaca tcggaatgat caccttgggg atatgcagct
     3721 cgcgggcgat cgcacgcacg tgcaacggac cagcaccacc agaggccacc agggcgaaat
     3781 cgcgcggatc atagcccttg gcgaccgaga cttcccgcac cgccagcgac atcttggcaa
     3841 tggcgatctc gacaaccgcc tgcgccgccg caacggcgtc catctttaat ggatcggcaa
     3901 tgcgctgcac gatgccacgg cgtgccgcgt cagcatcgag cttcatctgg ccgccaagaa
     3961 aattgtccgg atcaagccgt cccagcacga cattggcatc cgtgatggtc ggctcggtgc
     4021 caccgctgcc atagcagatc ggccctggat cggcgccggc gctctgcgga ccgaccttga
     4081 gggcgccgac ctcgtccagc cacgcgatgc tgccgccgcc ggccccgacc tcgaccacgt
     4141 cgatcatcgg caacatcacc ggatggccgc tcgcatagcc gcccacatag tagccgggcg
     4201 acatggtggg ctcgccgcgg cgcaccaggc ttgccttcgc ggtggtgccg cccatgtcga
     4261 aggaaatcac atccgcacag ccgagttgcc ggccgatctg agctgccgcg atgatgccgc
     4321 cgaccggtcc ggattccatc atggcggccg gccgtgcggt cgcgacctcg ggcgtcatca
     4381 cgccgccgtt ggagcgcata atcgaaagat tgccgcgaaa gccgatgtcg ccgaggctcg
     4441 atttgaggc
//
LOCUS       DATILV010000674         1831 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1438048, whole genome shotgun sequence.
ACCESSION   DATILV010000674 DATILV010000000
VERSION     DATILV010000674.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1831
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1438048"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..663)
                     /locus_tag="VLJ17_15960"
     CDS             complement(<1..663)
                     /locus_tag="VLJ17_15960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013418025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygenase MpaB family protein"
                     /protein_id="HSV24509.1"
                     /translation="MTTSIVPPWPLRSGLEAATRVLFDLGDQSANFLRPPGEAALVSP
                     DSVSWRVFKNPLSLFIGGIAAVIMELAEPRVRTGVWEHTTFRIDPIRRLQRTGLAAMI
                     TIYSARGTAEAMIAGVRQMHDRVVGSTPAGKAYRANDPELLNWVQGTAAYGFLQAYHA
                     YVRSLSDLERDCYYAEGALAASLYGASAPTSEAALEMRFEAMANQLERSDILFEFLAI
                     MRS"
     gene            complement(660..>1831)
                     /locus_tag="VLJ17_15965"
     CDS             complement(660..>1831)
                     /locus_tag="VLJ17_15965"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="complex I NDUFA9 subunit family protein"
                     /protein_id="HSV24510.1"
                     /translation="SLPATKALVDLLNRAQPIIEQAQNLYTEAEPLIDEAKKEWETVG
                     PAAQILIDVISHHVNRGSSPSQAAETVRAALNGSINSIAKDQLTDQRMSSATVFGGTG
                     FVGRRVVRHLRESGTRVRIVSRHRRQGEDAGIERIATDAHDERSVEAAIAGADGVVNA
                     ISLYVEHGSDTFHSVHVETAAKIARAARQAGVRRFVHVSGIGANTTSPSPYIRSRGEG
                     EVAVQTAFPGAVIVRPAVMFAADDAFLTTILRLLRSLPAYPIFGDGRTRLQPAYVEDV
                     ATAIVQILRQSQKPYAAYELAGPYEELLRTIARIAGLRPVLMRMPFAFWNALAGVAEM
                     LPRPPLTRNQVELMQIDTTASERVPGFRALGISPRSLEDELEAMLRQNKPKVLSS"
BASE COUNT          374 a          551 c          523 g          383 t
ORIGIN      
        1 cgagcgcatg atcgccagga actcgaacaa aatgtctgat cgctccagtt gattggccat
       61 cgcctcaaat cgcatttcaa gagctgcttc cgatgtcggt gcgctggcgc cgtaaagact
      121 ggcagctaaa gctccttccg catagtaaca gtcgcgctcc aaatccgaga gcgatcgcac
      181 atatgcatgg taagcctgca gaaagccgta tgcggccgta ccctgaaccc aatttagaag
      241 ctctgggtca ttggcacggt aggctttgcc tgcgggcgtc gagccgacga ctctatcgtg
      301 catttggcga acgccggcga tcatagcctc ggccgtgccg cgagcgctgt agatcgtgat
      361 catggcggca agtcctgtcc gctgcagtcg tcgaatcgga tcgatgcgga aggtcgtgtg
      421 ctcccacaca ccggtgcgca cacgcggctc tgcaagttcc attataacgg ccgcaatgcc
      481 gccaatgaaa agcgaaagcg ggtttttgaa cacacgccac gatactgagt cgggcgacac
      541 aagcgccgcc tcgccagggg gtcgcaagaa gttggcggat tggtcgccca gatcaaacag
      601 tacccgcgtc gcagcctcca agccgctacg tagtggccaa ggcgggacga tcgatgtagt
      661 cacgatgaca gaacttttgg tttgttttgc ctgagcattg cctcgagttc gtcttcgagc
      721 gatcgcggcg aaattccaag cgcgcgaaac cccggcacgc gttcggaggc cgtggtgtcg
      781 atctgcataa gttcgacctg attgcgggtc agtggcggcc gcggcagcat ctcagcaaca
      841 ccggccaatg cattccagaa ggcaaatggc atccgcatta acactggccg caatcctgcg
      901 atacgagcaa tggttcgcaa caactcctcg tagggcccgg cgagttcgta ggcagcatat
      961 ggtttctggc tctgccgcaa tatttgtacg atcgcggttg ccacatcctc cacgtacgcc
     1021 ggctggagcc tcgtcctgcc gtcgccgaat atcggatagg ctggcaggga ccgcaggagc
     1081 cggagaattg tcgtaagaaa tgcatcgtcc gcagcgaaca ttactgccgg ccggacaatg
     1141 accgcgccgg gaaatgcggt ctgcacggcc acttcacctt cgccgcggct gcgaatatag
     1201 ggcgaaggcg aggtcgtgtt ggcgccgatc cccgacacgt gcacaaaccg cctaaccccc
     1261 gcctgcctcg cagctcttgc gatcttggcg gccgtttcca cgtgcaccga atgaaacgta
     1321 tcacttccgt gctcaacgta gagactgatc gcgttgacaa caccgtcggc accggcaatg
     1381 gctgcctcta cggaacgttc gtcatgtgcg tccgttgcga tcctttcgat tccagcgtcc
     1441 tcaccctgcc tgcgatgccg cgagactatg cgcaccctgg tgccggattc gcgcaaatgg
     1501 cgcacgacac gacggccaac aaagccggtc ccgccaaata cggttgcgct gctcattctc
     1561 tgatccgtca attgatcctt tgcgatgctg ttgattgacc cgttcaacgc ggcacggacg
     1621 gtttcggcgg cttgtgacgg ggagcttccc cggttgacat gatgcgaaat cacatcgatc
     1681 aaaatttgcg ctgcagggcc aacagtctcc cactccttct tcgcttcatc gatcagcggt
     1741 tcggcttcgg tgtacaggtt ttgcgcctgt tcgatgatcg gttgtgctct attgagaaga
     1801 tcgaccagcg ccttggtcgc tggcaaggat t
//
LOCUS       DATILV010000675         1645 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2971245, whole genome shotgun sequence.
ACCESSION   DATILV010000675 DATILV010000000
VERSION     DATILV010000675.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1645
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2971245"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..319)
                     /locus_tag="VLJ17_15970"
     CDS             complement(<1..319)
                     /locus_tag="VLJ17_15970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24511.1"
                     /translation="MAPPPAAAETNFSTVTDPPSWPGATQLPFMPPLFQLALTTAPAE
                     QPQTSDPIDPPPTPASDAASEPESPAITQSSPVPAPLQSTEDADHTFALAAIAFLTIA
                     ISGS"
     gene            complement(794..>1645)
                     /locus_tag="VLJ17_15975"
     CDS             complement(794..>1645)
                     /locus_tag="VLJ17_15975"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV24512.1"
                     /translation="WLAALRQGLEKLGWSEGRNIHFEFRWSGFDMELMQRQAKELVAL
                     QPDLIFTSSSPIIGTVLRLTKTIPVVFPNIVDPVGQGFAASLSRPGGNATGLVNLEPS
                     MAGKWIGLLKEVTPRLARVVIAYNPASSPYAGLYLDYFKSTAPRFGVEVITAPVADMS
                     EFKTIAATQARELNTGFVLLPSAFMSGYAREIGALMAQHQLPAVSFTRDFAISGGLLA
                     YGNDIADNYRRAAKFIDRILKGEKPADIPIEFPVKFSLVINLKTAQALGLVVPTHLQQ
                     LADEVIE"
BASE COUNT          346 a          454 c          501 g          344 t
ORIGIN      
        1 ccgaaccgga aatagcaatc gtcaggaacg cgatcgccgc gagcgcgaag gtgtgatcgg
       61 cgtcttccgt ggactgcaga ggcgcaggga caggtgaaga ttgcgtgatt gccggcgatt
      121 ccggctcact ggcggcatcg cttgccggtg tcggcggagg atcgatcgga tcgctcgttt
      181 gcggctgctc ggccggcgcc gttgtcagcg ctagttggaa caaaggcggc atgaaaggca
      241 attgagttgc tcccggccag gacggcggat ccgtcactgt ggaaaaattc gtttcagccg
      301 cagccggcgg cggtgccatt gttggttgct gcgcaggttg tggcgctgcc gactgtgcgg
      361 gcacatccgg cgcgggccta tcggatgcct gcctcgcgcc cctctcactg ttgtcttccg
      421 gtccgagata ccaacattga cggccgatgg cgcgatcggt ccgataatac cagtgctcgc
      481 cttgcggcgc cggtgcgttc ggcttttcga tgcaaggggc ggcgtgcacg gcccgcgccg
      541 acacagcgcc ggacgcagct aatgaaagaa gggcgaatac agccgggacc aatgttggtc
      601 tgtgttgtga catgcgtttc tccatcggca ttcgcatttc tgcagacgtg aatcagcatt
      661 tcgtagccgc ggattttggc tgctgtgcgc agggattggg gctgtaatgc gttgcaaatt
      721 cgacggagag cttgaccggt agtgcggtga ggttaaacgc acgtccaatg gttgcattcg
      781 cgcgaactac ggctcactcg atcacttcgt cggcgagttg ctgtagatgt gttggtacga
      841 cgaggcccag cgcttgtgca gtcttgagat tgatgaccag cgaaaatttg accgggaatt
      901 cgatggggat atcggccggc ttctcgccct ttaaaatccg atcgatgaat ttcgccgcac
      961 ggcgataatt gtcggcaatg tcgttgccgt aagcgagtag acccccgctt atggcaaaat
     1021 cgcgcgtaaa agagacggcg ggaagctgat gttgcgccat cagcgctcca atctcgcggg
     1081 catacccgct catgaaagcg ctgggcaata gaacaaatcc cgtatttagc tcgcgcgcct
     1141 gtgtggcagc gattgtcttg aattcactca tgtcggcgac cggagctgta attacttcca
     1201 cgccaaaacg tggcgcggtc gatttaaagt agtccagata gaggcccgca tagggagacg
     1261 aggccggatt atacgcgatg accacccgcg ccaggcgcgg cgtgacctcc ttcaaaagcc
     1321 caatccactt gcccgccatc gaaggctcga gattgaccag acctgttgcg ttgccccctg
     1381 gccgcgacag cgaagcggca aaaccttgac cgaccggatc gacgatgttc gggaatacga
     1441 cagggatcgt tttcgtaagc cgaagtacag tcccaatgat gggagagctc gacgtaaaaa
     1501 ttagatctgg ttgcaacgct actagctctt tcgcttgccg ctgcatgagc tccatatcaa
     1561 acccggacca gcgaaactca aaatgaatat tgcgaccttc agaccaaccg agcttttcaa
     1621 ggccctgacg caacgcagcc agcca
//
LOCUS       DATILV010000676        12321 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2718678, whole genome shotgun sequence.
ACCESSION   DATILV010000676 DATILV010000000
VERSION     DATILV010000676.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 12321)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12321)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12321
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2718678"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..847)
                     /locus_tag="VLJ17_15980"
     CDS             complement(<1..847)
                     /locus_tag="VLJ17_15980"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HSV24513.1"
                     /translation="MRIRSYDYIIIGAGSAGCVLANRLTEDDGAQVLVVEAGGRDWHP
                     YIHIPLGLGKLHERRMFDWRFVTEPEPNLDGRSLEASRGKVLGGSSSINVMAYTRGNR
                     SDFDRWAQKGATGWSYADVLPYFKRCETFAGGANAWRGGTGPLGTEFAKTADPLYPAW
                     IEAAKAAGIPYTADYNATSQEGFGRSQYTIRNGRRSSAATAFLKPAMRRPNLTVETGA
                     LVTQVILRGTTATAVEYVKGGRRARAGVTREVIISGGAFSTPQILMLSGIGPAVHLRQ
                     VGIEPI"
     gene            complement(936..1802)
                     /locus_tag="VLJ17_15985"
     CDS             complement(936..1802)
                     /locus_tag="VLJ17_15985"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HSV24514.1"
                     /translation="MDAATRTNLEVAPLTKHIGAEIHGIDLRHSLSTETIGAIRQAWL
                     DHLVLVFRGQRFSQEDLIRATGYFGEIGPLSRPPKYFPKGYTKLLPNIMLISNIRENG
                     DVIGALPDGEMNFHHDMIHAELPHNGTLLYSVEIPSYGGDTLFASGYAAYDTLDVTIR
                     NRLEGRKALNHYNYGTTIRGDASNAIEAFNEAVHPVFRTHDETRRKAIYVDRLMSMKI
                     VDMPQAESDELLNAVFDHSEHPQFVYRHVWRVGDLLVWDNRCSAHARDDFPSDQRRLM
                     WRTTVKGTVRPY"
     gene            complement(1976..6880)
                     /locus_tag="VLJ17_15990"
     CDS             complement(1976..6880)
                     /locus_tag="VLJ17_15990"
                     /EC_number="1.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004352 - glutamate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_process: GO:0019551 - glutamate catabolic process to
                     2-oxoglutarate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-glutamate dehydrogenase"
                     /protein_id="HSV24515.1"
                     /translation="MNIDSRIGCVAQGLGVSIDAFEDEDTARELLEDATAIFKRQVPG
                     SPPDFVMQVFARAAPEDLVRYEAPEIAEIAAGTWRFLGERRQQTPKIQVAMAESTSGS
                     RLKSVSILEIVNDDMPFLVDSVMAELAEQGLDPLLVVHPRFDVERDANGRLHALSVSS
                     TRGANSRRESLIQVHVDRIDDENAKNTLIIALDNALAHVRHAVDDWKAMLGQVNAVIT
                     ELTNCRPVARVDDLDESIAFLRWLMDDNFTFLGVRDYVYSEDGSAAGLIFASALGTLR
                     GRQGEGAEGGRLVLTRREREALQEPKTLIITKTNSRSRVHRRTVMDYVAVKRHDRDGK
                     LTRVLQIVGLFTSTAYVRSTGNIPHLRSKVANVVARSGFDGTGHSGKALLNLLETYPR
                     DEMFQIDEDTLLRFALTILQLNERPRVRVLPRRDAFERFVSVLVYAPRDRYDSAARAA
                     IGELLATAFAGKMVSFAPFYPEGQMVRVHFIIAHKEDGRPGDLGHPPRRELESAITRL
                     VKTWPDRLFERLDKAYDPQRARVLFAKYGNAFSPVYREAFDSSVAVGDIAAIEALSFD
                     FPLGVDFQPGNREDRGAASLKVWSYGRPIPLSERVPVLEHMGFIVVDESTYDIEVGDH
                     DRSHVWLHAMQLDRRDGPVVDIGAAKSRLDSCFAAVMRDEAENDGYNALVLIAGLDWR
                     EVALMRTLSRYLRQLRVPYSQDYMWATHIKHATIAKRIVALFGVRFDPDLAMSLPQRD
                     ERQAAITGEIEAALTKVDSLDEDRIIRHFVNAVQSAVRTNFYQFPEPNAAAPADKSRT
                     ADQAIAIKFDSRKINGMPLPRPLFEIFMCSPRLEAVHLRFGPVARGGIRWSDRPQDFR
                     TEILGLVKAQQVKNAVIVPVGAKGGFVPKRLPAGHRDAIQAEAIAVYKIFMSTLLDLT
                     DNLDLKGVVAPSKVVRHDADDPYLVVAADKGTATFSDTANEIAREHGFWLDDAFASGG
                     SAGYDHKKMGITARGAWESVKRHFREMDIDLSLTPFSVAGVGDMSGDVFGNGMLRERT
                     IRLVAAFDHRDIFIDPNPDPERSFDERKRLFDLPRSSWQDFDRSIISPGGGIFSRAAK
                     EIDLSEEARTVLGLTATKATPQEVMNAILKAPVDLLWFGGIGTYVRASSETDEFVGDR
                     ANDTIRAVAAELRCKVIGEGANLGLTQRARIEVALRGIHLNNDAIDNAAGVNTSDVEV
                     NIKIALSIPLHNGRLTRNDRDILLAGMTEEVAAVVLRNNYQQPLALSLVERRGLEDLG
                     FQQRLMQTLEKRQLLDRAVEFLPNDMEIAERRQRAQPLTRPELAVLLAYAKLALHEDL
                     LHTDVPDDPYLAHELGRYFPQSISRHFPDALEHHRLRRDIIATQLANSMINRGGPAVV
                     VRIADQTGASVDRIAAAFTAVRDSFRLTTLNTSIEALDNKVAGAVQLGLFAAVQNLLL
                     DRIVWFLRNVDMRQGLAGIVDHYRVKIATLSGRLDHYLPAEAQRVRDAAALKMTSQGV
                     PESVARNIANLPLLGSTADIVLIADRTQQPFSLVAPVFFAAEAYFQLDRIVAAARDIT
                     LVDYFDRLAFDRGLDSMGDALRRLVAEMTAVGGSGAEAVAAFVRQKGNDVDRVRDAMH
                     QMVASGLTLSKLTVAASMLGDLAR"
     gene            7137..7691
                     /locus_tag="VLJ17_15995"
     CDS             7137..7691
                     /locus_tag="VLJ17_15995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015315140.1"
                     /note="This protein belongs to a clade of uncharacterized
                     proteins related to peroxidases such as the
                     alkylhydroperoxidase AhpD; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxidase-related enzyme"
                     /protein_id="HSV24516.1"
                     /translation="MTALELTDAELTPAMRAYFDKCIEKLGFVPNVLKAYAFDMPKLE
                     AFVAIYNDLMLAPSGLTKLEREMIAVAVSSYNRCYYCLTAHGAAVRSLSDDPVLGELI
                     VMNFRAARLDRRQRAMLDFAVKLTAEPWGVEEIDRQTLRDAGFSDRDIWDIAAVAGFF
                     NMSNRIASATDMRPNSAYHGQNRG"
     gene            7729..9504
                     /gene="ggt"
                     /locus_tag="VLJ17_16000"
     CDS             7729..9504
                     /gene="ggt"
                     /locus_tag="VLJ17_16000"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008131383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HSV24517.1"
                     /translation="MLTPGRQALPKRPRTVLTIVAVLGLAWSTTVSAQQRLYEHLVEQ
                     SSGTPAVQLATARHGMVSSQDQQATRIGLDVLERGGNAVDAAVAIGFALAVTVPKAGN
                     IGGGGFMLVHVADRNENTAIDYRESAPAATSAEVFLGPDQQADPAKSRDSGLGVGVPG
                     TVAGLSLALDRFGSGKFTLAELIAPAVRLARDGIAIKDDLYDSLQRGQQRLARWPTAA
                     RIFLKSGGTAPPLGDKLVQPELAEVLETIGREGARGFYLGPIADKIVASVREAGGLMT
                     RGDLENYNAVIRNPVYGTYRGYEVVSMPPPSSGGVHLVEMLNILEGYPSGIVGSGSAA
                     ALHLQLEAMKLAYADRAQYLGDIDSVDVPVRRLISKSHATELRAKIDVRHTTRSPEIS
                     PDIMVPSGGNTTHFSVVDAAGNVVANTYSLNFNFGLGLVAEGTGILLNNELDDFAAKP
                     GAPNAFGLVGGAANAPGPAKRPLSSMSPTIVFKDNKPVLVTGAPGGSRIITTVLQVIV
                     NTIDGHMTIGNAITAPRVHHQWSPDEVVVEPHFPADKARALVALGHKVHFGSLFGSAH
                     SIGVTPQAMIGAADLRARGSAAAGY"
     gene            complement(9545..9748)
                     /locus_tag="VLJ17_16005"
     CDS             complement(9545..9748)
                     /locus_tag="VLJ17_16005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24518.1"
                     /translation="MSRVAVGRVNKPFGKPPRPTGGKHNVARLFVPAYEDGISVNITV
                     RLNRNSDARRRLGRMLEPRRTVS"
     gene            complement(9806..9880)
                     /locus_tag="VLJ17_16010"
     tRNA            complement(9806..9880)
                     /locus_tag="VLJ17_16010"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9846..9848),aa:Gly,seq:gcc)
     gene            10363..10683
                     /locus_tag="VLJ17_16015"
     CDS             10363..10683
                     /locus_tag="VLJ17_16015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011924226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2849 domain-containing protein"
                     /protein_id="HSV24519.1"
                     /translation="MTSPLEQKLKITGPVVVTANRLRDGAVVYRTLDGKWSTRLEEAA
                     VVSTVPAATELLAAAVADDISAVGAYVAPVRVGPGGWPEPGNLRERIRQSGPTTVPSV
                     TVGV"
     gene            10685..>12321
                     /locus_tag="VLJ17_16020"
     CDS             10685..>12321
                     /locus_tag="VLJ17_16020"
                     /EC_number="1.8.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011084295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0050311 - sulfite reductase (ferredoxin)
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite/sulfite reductase"
                     /protein_id="HSV24520.1"
                     /translation="MYLYDELDRTLVAERVSEFRDQVGRRMSGKLTEEEFKPLRLMNG
                     VYLQLHAYMLRIAIPYGTLSSRQLRMLAHVGRRYDRHFGHFTTRQNIQFNWIKLEDLP
                     DATADLASVGLHGMQTSGNNVRNITTDQWAGVAPDELEDPRIWAELLRQHTTLHPEFS
                     FLPRKFKIAVTAAAHDRAAVKVHDVGLRLHRNGAGEIGFEVLVGGGLGRTPFIAKSIR
                     PFLPKRDILSYVEAILRVYNQFARRDNIYKARIKILVHDLGAEAFAREVEAEWQHIKD
                     GPLALDPAVVAEIAARFRYPDYARLDDNPSELARLRNANRRFDAWLGNAVANHKVPGY
                     AIVTLSLKPEGGPPGDATSDQMDAIADLADRYSFGEIRVGHEQNLVFPHVAQRDLPEL
                     WRALDAIGVAIPNVGLVSDIIACPGLDYCSLANARAIPVAQELTRRFRNLDLAHDLGR
                     LHINISGCINACGHHHVGHIGILGVEKNGEEFYQITLGGRADERAELGALLGPAVPYG
                     KVADVVEEVVAAYLELRERPDEKFVETVKRLGVEPFK"
BASE COUNT         2445 a         3700 c         3746 g         2430 t
ORIGIN      
        1 ctattggctc gatcccgacc tggcgcagat gcacggccgg tccgatgcca gacaacatca
       61 gaatttgcgg cgtgctgaag gcaccgcccg aaatgattac ctcgcgtgtc acgccggccc
      121 gagccctgcg gccgcccttg acgtattcga ccgcggtcgc ggtcgtgccg cgcaggatca
      181 cctgcgtcac cagagctccg gtctcgaccg tcagattggg tcgccgcatg gccggtttga
      241 gaaacgccgt cgcggcggac gagcggcggc cgtttcggat ggtgtattga ctgcgaccaa
      301 atccctcctg agaggtcgcg ttgtaatccg ccgtgtacgg gatgccggcg gctttggcgg
      361 cctcgatcca ggccggataa agcgggtcgg ccgttttggc gaactcagtt ccgagcgggc
      421 ccgtgccgcc gcgccaggca tttgcgccgc ccgcgaaagt ttcgcagcgc ttgaagtatg
      481 gcagtacatc cgcataggac catccggtcg cacccttctg agcccagcga tcgaaatcgc
      541 tccgattgcc gcgcgtatag gccatcacat tgatggacga cgacccaccc agcaccttgc
      601 cccggctcgc ttcgagagaa cggccatcga ggttgggctc cggttcggtc acgaacctcc
      661 aatcgaacat gcgccgttca tgaagcttgc cgaggccaag cggaatgtga atgtagggat
      721 gccagtcgcg tccgccagct tcgaccacca gcacctgtgc accatcgtct tcagtaagcc
      781 ggttggcgag cacgcagccc gcggagccgg cgccgataat gatgtagtcg tagctcctga
      841 tacgcatgag cttccgcgag gtaaggcggg cccccgccaa ttttccgacc aggtcgtggg
      901 acggtgcgct caactcccgt gtgcggccaa atggctcaat acggacgaac cgttcccttc
      961 actgtcgtgc gccacatcag ccggcgctgg tctgagggaa aatcatcacg cgcgtgggcc
     1021 gagcagcggt tgtcccaaac caggagatcg ccgacgcgcc agacgtggcg atagacgaac
     1081 tgcggatgct cggaatggtc gaacacggca ttgagcaatt cgtcgctctc ggcttgcggc
     1141 atatcgacga tcttcatgct cataaggcga tcaacataga tcgccttgcg gcgggtctca
     1201 tcgtgggtgc gaaacaccgg atgcacagct tcgttgaagg cctcgatggc gttgctggcg
     1261 tcgccccgaa tcgtggtgcc gtaattgtaa tgattgaggg ctttgcggcc ttccagacgg
     1321 ttccggatcg tcacatcgag ggtgtcgtag gccgcgtagc cactggcgaa cagcgtgtcg
     1381 ccgccgtaac ttgggatctc taccgaatac aacagcgtgc cgttgtgcgg cagttcggcg
     1441 tggatcatgt catgatggaa attcatttct ccgtcaggca gtgccccgat gacgtcgccg
     1501 ttctcgcgga tgttggaaat caacatgatg ttgggaagca gttttgtata tcccttggga
     1561 aaatatttcg gcggccgcga cagtggtccg atctcgccaa aatatccggt cgccctgatc
     1621 aagtcttcct gagagaagcg ctggccgcga aacaccagaa ccaggtgatc aagccaagcc
     1681 tggcgaatgg ctccgatggt ttcggtgctt agtgaatggc gtaggtcgat accgtggatt
     1741 tcggcaccga tgtgctttgt gagcggagcg acctcgagat tggtcctggt cgcagcgtcc
     1801 attgtttcct ccttggtgtc cggcgcccct ggcgacaact cagagggtag ccggatgacc
     1861 aaactctgac cagcgggagg ttggagcgca tgcacctcct tcaatgcgga cgagccacgc
     1921 gctttgagcc cggcgatcac cacagagtga acgccaagct aatgaggaat tgtttttaac
     1981 gcgccagatc gccaagcatg ctggccgcca ccgttagctt cgacaacgtc aagcccgatg
     2041 ccaccatctg atgcatcgca tcgcgtacgc gatcaacatc attgcctttt tgccgcacaa
     2101 aggccgcgac ggcctcagcg ccactaccgc ccacagccgt catctcggca accagccggc
     2161 gtaacgcgtc gcccatggaa tcgagcccgc ggtcgaacgc caggcgatcg aagtagtcca
     2221 ctagcgtgat gtcgcgggcc gcggccacga tgcggtcgag ttgaaaataa gcctcggcgg
     2281 caaaaaagac cggtgcaacg agcgaaaacg gctgttgggt gcgatcggcg atgaggacga
     2341 tgtcggcagt cgagccgagc aatggcaaat tcgcaatatt gcgggcaacc gactcgggta
     2401 caccctggga cgtcatcttg agcgctgcgg cgtcacgtac gcgctgggct tctgcaggca
     2461 gatagtggtc gagcctgccg gaaagtgtcg cgatcttaac tcgatagtga tcgacaatgc
     2521 cggcgagacc ttggcgcata tccacattgc gcaaaaacca gacgatgcga tcgagcaata
     2581 gattctgtac cgccgcgaat aggccgagct gcacggcgcc ggcgaccttg ttgtcgagcg
     2641 cctcgatcga cgtattgagc gttgtgagtc ggaaactgtc tcttaccgca gtgaaagccg
     2701 cagcgatacg atcgactgag gctccggtct ggtcagctat tctcaccacg actgccgggc
     2761 cgccacggtt gatcatggaa ttggccagct gggtcgcgat gatatcccgg cgcaggcgat
     2821 gatgctccaa cgcatccgga aagtggcgcg agatcgattg cggaaaatag cggccaagtt
     2881 cgtgggcgag ataaggatca tccggtacat cggtgtgaag aaggtcctcg tgcagcgcaa
     2941 gcttggcata ggccagcagt accgcaagct caggccgcgt caggggctgg gcgcgctgtc
     3001 ttcgttccgc gatttccatg tcgttcggca ggaattcgac ggcgcgatcg agcagctgcc
     3061 gcttttccaa cgtctgcatc agtcgctgtt ggaacccgag atcttcaagg ccgcggcgtt
     3121 cgacgagcga caacgccagg ggctgctggt aattgttgcg caaaaccacg gcggcgacct
     3181 cttcggtcat gccggccaac aggatgtcgc gatcgtttcg cgtaaggcgc ccgttgtgca
     3241 ggggaatgct taaagcgatt ttgatgttga cctcgacgtc ggacgtgtta acgcccgccg
     3301 cattgtcgat tgcgtcgttg ttgaggtgga taccgcgcaa cgccacctca atgcgggcgc
     3361 gctgtgtcaa cccgagattg gcgccctcac cgatgacctt gcaccgcagt tcggcagcga
     3421 cggcacgtat cgtgtcattg gcacgatctc caacgaactc gtcggtttcg ctcgatgcgc
     3481 gcacatatgt gccgataccg ccgaaccaca acagatcaac cggcgccttg aggatcgcat
     3541 tcatgacttc ctgcggcgtc gcttttgtgg cggtgagccc cagcacggtg cgggcctctt
     3601 ccgacaaatc gatttccttc gcggcacgcg agaaaattcc gccacccggg gaaatgatgc
     3661 tgcgatcgaa atcctgccag ctcgatcggg gcagatcgaa caaacgcttg cgctcatcga
     3721 agctgcgttc gggatcggga ttaggatcaa taaaaatgtc gcggtggtcg aatgcagcga
     3781 caagccggat ggtccgttca cgcaacatgc cattgccgaa gacatcgccg gacatgtcgc
     3841 cgacgccggc gaccgaaaac ggcgtcagcg agaggtcgat gtccatttcg cggaagtggc
     3901 gcttgacgga ttcccaggcg ccgcgcgccg tgatgcccat ttttttgtgg tcgtagcccg
     3961 ccgaaccgcc ggacgcgaag gcatcgtcaa gccagaagcc atgttctctt gcgatctcgt
     4021 tggcggtatc cgagaaagtg gcggttccct tgtcggcggc gaccaccaga taaggatcat
     4081 ctgcatcgtg acggaccacc ttgctgggcg ccacgacgcc cttgagatca agattgtctg
     4141 tgaggtcgag cagagtcgac atgaagatct tataaaccgc aatcgcttcg gcctggatcg
     4201 catcgcgatg gccggcgggc agccgcttcg gcacaaaacc gcccttcgca ccgaccggca
     4261 caatcacagc gtttttcacc tgttgcgcct tgacgagccc aagtatctcg gtgcggaagt
     4321 cctgcgggcg atccgaccac ctaataccgc cgcgggcgac cgggccgaat cgcagatgca
     4381 cggcctcaag ccgtggcgag cacatgaaaa tctcgaatag cgggcgcggc agcggcatac
     4441 cgttaatctt gcggctgtcg aatttgatgg cgatcgcttg atccgccgtc ctgcttttgt
     4501 ctgcgggcgc ggccgcattc ggttcaggaa attgataaaa attcgtacgg acagcagatt
     4561 gtacggcgtt gacgaaatga cggataatgc ggtcttcatc aaggctatcg accttcgtca
     4621 gcgctgcctc tatttcgccc gtaatggcgg cctgacgttc gtcgcgctga ggcaacgaca
     4681 tagccaaatc gggatcaaaa cgcaccccga acagtgccac gatccgtttc gcaatcgtcg
     4741 catgcttgat gtgggtggcc cacatgtagt cctgcgaata cggaacacgc agctggcgca
     4801 aataacgcga cagggttcgc atgagcgcga cttcgcgcca atcgaggccg gcgatcagaa
     4861 cgagcgcgtt gtagccatca ttttcggctt cgtcccgcat taccgccgca aaacacgaat
     4921 cgagccgcga cttggcagcg ccaatatcga ctaccgggcc gtcgcgccgg tcgagctgca
     4981 tggcatgaag ccaaacatga gatcggtcgt ggtcgcctac ctcgatgtca taggtgcttt
     5041 catctacgac gatgaagccc atgtgctcca gcacgggcac gcgctccgac agcggaatcg
     5101 ggcggccgta actccaaacc ttgaggctcg ccgcgccgcg gtcctcgcgg ttgccaggtt
     5161 ggaagtcgac gccaagcggg aaatcgaatg acagcgcttc gatggccgca atgtcgccca
     5221 cggcgacgct ggaatcgaaa gcttcgcggt agactggcga aaatgcattg ccatacttgg
     5281 cgaacaggac tcgcgcgcgc tggggatcat aagccttatc gagcctttca aagagccggt
     5341 cgggccaggt cttcaccagg cgcgtgatgg cagattcgag ttcccggcgc ggcggatgac
     5401 cgaggtctcc tggccgaccg tcctccttgt gggcgatgat gaaatggact cgcaccatct
     5461 ggccttcggg gtagaacgga gcgaacgata ccatcttgcc ggcgaacgcg gtcgcaagca
     5521 gttcgccgat ggcggcgcgc gcagcgctgt cgtaacggtc tcgcggcgcg tacacgagca
     5581 ccgacacaaa gcgttcgaat gcatcccgtc gcggcagcac gcgcacccga ggtcgttcgt
     5641 tgagctggag aatcgtcaac gcaaaccgca acagcgtgtc ctcgtcgatc tgaaacattt
     5701 cgtcgcgcgg gtaggtctcg agcaggttga ggagcgcctt gccggaatgg cccgtgccgt
     5761 caaatccgga gcgcgccacg acattggcga ccttgcttcg aagatgcggg atgttgcccg
     5821 tcgaacgcac gtaggctgtc gacgtgaaca ggccgacgat ctgaaggacg cgggtcagtt
     5881 tgccgtcgcg gtcatgacgc ttgaccgcca catagtccat tacggttcga cgatgcaccc
     5941 gcgaacggga attggtcttg gtaatgatga gagtcttagg ctcttggagc gcctcgcgct
     6001 cgcgccgcgt tagtacgagc cggccgcctt cggcaccttc gccttggcga ccgcgcaggg
     6061 tgccgagcgc agaggcgaaa atcaaaccgg cagcactgcc gtcctcgctg tagacgtaat
     6121 cgcgcacgcc aaggaaagtg aagttgtcgt ccatcagcca tctgagaaat gcgatggatt
     6181 cgtcgagatc gtcgacccgc gctaccggtc ggcaatttgt cagctcggtt atgacggcgt
     6241 tgacctgccc gagcattgct ttccagtcgt caacggcgtg ccgaacatgg gcgagcgcgt
     6301 tgtcgagcgc aatgatgagc gtgttctttg cgttctcgtc gtcgatgcgg tcgacatgta
     6361 cctggattag gctctcccgc ctggaatttg ccccgcgagt cgatgacacg gacaaggcgt
     6421 gcaatcggcc attcgcatcg cgctcgacgt caaaccgcgg gtgcaccacg aggagagggt
     6481 cgagcccttg ttccgccaat tccgccatga cggaatcgac cagaaatggc atgtcgtcgt
     6541 tgacgatttc gaggatcgac acgcttttaa ggcgcgaacc ggatgtcgat tccgccatgg
     6601 cgacttggat cttcggagtc tgctgccgcc gctcgccgag gaaccgccaa gttccggccg
     6661 cgatctcggc aatctcgggg gcttcgtaac gcaccagatc ctccggggcg gcgcgagcga
     6721 acacctgcat cacgaaatct ggcggcgagc cgggaacctg gcgcttgaaa atcgcggtcg
     6781 catcctccaa cagctcacga gcggtgtctt catcctcgaa ggcatcaatc gaaacaccga
     6841 ggccctgagc gacacaaccg atgcgcgaat ctatgttcat gcgacaacct ttctgattcg
     6901 cggcgcacat tgctccggaa accggtcaag tggaagatcg cttcggggat aaccgggaaa
     6961 attgacgcgg tggcgggtgt tggcgtgtca cgccacgaac ctgttagctt cgcggacgtt
     7021 tgcgacatcc ataagggaga cccgcggtgg ccaaaaagcc cgcaaaatca aggccggaaa
     7081 ccccaaaact gatcagccag acgaccacgg gggaggcccg cgacgacgac accgtcgtga
     7141 ccgcattgga acttactgac gccgagctga cgcccgccat gcgggcctat tttgacaaat
     7201 gtatcgagaa gctcggtttt gttccgaatg tgctgaaggc ctacgcattt gatatgccaa
     7261 agcttgaggc cttcgttgct atctataacg acctcatgtt ggcgccgtcg ggacttacca
     7321 agctcgagcg cgaaatgatc gcagttgctg tgtcgtcata caaccggtgc tactattgcc
     7381 tcaccgctca cggcgccgcg gtgcggagcc tctcggacga ccccgtgctc ggcgagttga
     7441 tagtaatgaa tttccgtgcc gcacgcctcg atcgccggca acgggccatg ctggatttcg
     7501 cggtcaaatt gacggccgag ccctggggtg tcgaggagat cgaccgccaa acgttacgcg
     7561 acgccggttt ttccgaccgc gacatctggg acatcgccgc ggttgcgggt tttttcaata
     7621 tgtcgaaccg catcgcctca gccacggaca tgcggcccaa ttcggcctat catggtcaaa
     7681 accggggatg agtggtgcat cacatcgagg cgcgggattg atggtcgcat gctgacgccg
     7741 ggaagacagg ctttgccgaa acgcccacga acggttctca cgatagtagc ggtcctgggg
     7801 ctggcttggt cgaccactgt ttcggcccag cagcgccttt atgaacatct tgtcgaacaa
     7861 agttccggca cgccggccgt ccagcttgcg accgctcgcc acggcatggt ttccagtcag
     7921 gatcagcagg cgactcggat cggattggat gttcttgaac gaggcggtaa tgccgtggac
     7981 gctgcggtgg cgattggttt tgcccttgcg gtgactgtcc caaaggccgg aaatatcggc
     8041 ggcggcggct tcatgctggt gcatgttgcc gaccgtaacg agaatacagc gatcgattac
     8101 cgagaaagcg ctccggcggc cacttccgcc gaagtattcc ttgggcccga ccagcaggcg
     8161 gatccagcca agtcgcggga ctccggatta ggggtggggg tgcccggcac cgtggcgggg
     8221 ctcagccttg cgctcgatcg ctttggctcc ggaaagttta ccttggcgga actgattgcg
     8281 ccggcggtgc gtctcgcgcg ggatggcatt gccatcaagg atgaccttta cgattcgctg
     8341 cagcgcggac agcaacggct tgcacggtgg ccaactgcgg cgcggatctt tctgaaatct
     8401 ggcggcaccg cgccgccgct gggcgacaag ctcgttcagc cggaactggc cgaagtattg
     8461 gaaacgatcg gacgtgaagg cgcgcgtggg ttttacctgg gtccgatcgc tgacaagatc
     8521 gttgcctcag tccgtgaagc cggcgggctc atgacgcgcg gcgatcttga aaattacaac
     8581 gcggtgattc gtaacccagt ttacgggacc tatcggggct atgaggtcgt ctcgatgccg
     8641 ccgccgtctt ccggtggtgt tcatcttgtg gagatgctga acattttgga gggatacccc
     8701 tccggcatcg tcggttccgg ctcggcggcc gcgctccacc tgcaactcga ggccatgaaa
     8761 cttgcctacg cggatcgtgc gcaatatctc ggtgacatcg attcggtcga tgttccggtg
     8821 cgacgactaa tctcgaaaag ccacgcaacc gaattgcgtg caaagataga tgtgcggcac
     8881 actacccgtt cgcctgaaat cagccccgac attatggtgc cttccggggg caataccacg
     8941 catttttccg tggtggatgc ggccggcaat gtggtggcca acacctattc gctcaatttt
     9001 aactttggac ttgggctggt cgctgaggga acgggaattt tgctaaacaa cgagctggat
     9061 gatttcgctg ccaagccggg ggcgcccaac gctttcgggc tcgtcggagg cgccgcgaat
     9121 gcgcccggtc cggccaagcg gccgctgtct tccatgagcc ccacgattgt gttcaaggac
     9181 aacaagccgg tgttagtgac aggcgcgccc ggaggcagtc gaatcatcac gaccgttttg
     9241 caagtcatcg tgaacaccat cgacggccat atgacgattg ggaatgcaat cacggcgccg
     9301 cgtgttcatc atcagtggtc accggacgaa gtcgttgtcg agccgcattt cccggcagat
     9361 aaggcgcgcg cacttgtcgc cctgggccac aaggtgcact tcggttcgct gtttgggtca
     9421 gcgcattcga ttggcgttac gccgcaggcc atgatcggcg cggccgatct gcgggcgcga
     9481 ggctctgccg cagccggata ctaacagcgt cagcgggaag ccaccgggct tgaaaacaac
     9541 gctttcacga caccgtgcgg cggggctcaa gcatacgccc aagtcggcgt cgcgcatcgc
     9601 tattgcggtt caggcgcacc gtgatgttga ccgagatgcc atcttcatag gccggcacaa
     9661 acagccgcgc gacgttatgc tttccgccgg tcggcctggg gggctttccg aaaggtttgt
     9721 tcacacgacc gaccgcaaca cgcgacatcc ccaacccccg cactcagacg acaaaacaca
     9781 cacacttggg gccgactgag cagactggag cgggcgaagg gattcgaacc ctcgacccca
     9841 accttggcaa ggttgtgctc tacccctgag ctacacccgc atcccgaccg gcagttggct
     9901 ccctaccggc cgctcctcct atgccaaata ggagaccgga aagcaaccgg ttcgggcagc
     9961 gactgcgcgg cggtcaaaaa aacgttgtcg ttaaacctaa ctccgcggtg tctatctggt
    10021 ggttccatga cgatcagcat ttcaaacctt gacaccgcgc acggagaagg aaactttcac
    10081 cggagagcgt taccggggaa gttgtttcaa gatctatcca aatcgggaaa gaatgatttt
    10141 ctatttgaat aggtcttccg atgattatat agaaattcat tctaatgacc ggagaaagtc
    10201 tcgcgtgtcg ttacgtgttt cgtccgtgtg ctgtgcggtc cagccgctcc acttgccgct
    10261 atatgctttc cggatggcac ccggtgcgat cggcgagaca tacaccccgt cggactaccg
    10321 gcgcatcgtg tggcgcgagc attccggccc ggagcttgac gcgtgacatc ccctctggag
    10381 cagaagctga agatcaccgg tccggtcgtc gttacggcca accggctccg tgatggtgca
    10441 gtcgtctacc gtacccttga tggcaagtgg tcgacccgcc tcgaggaggc cgccgttgta
    10501 agtaccgtcc cggccgcaac cgaacttctg gcagccgctg tcgcggatga catatcggcg
    10561 gtcggggcct atgtggcacc ggtccgggtc ggaccgggag gctggcctga gcctggcaat
    10621 ctgcgcgagc gcatccgcca gagtggaccc accaccgtac cgtcggtcac agttggggtt
    10681 tgacatgtat ctgtacgacg agcttgaccg aaccctcgtg gccgaacgcg tctcagagtt
    10741 ccgcgaccag gtcggccgcc gcatgtcggg caaattgacc gaggaggaat tcaagccgct
    10801 gcggctcatg aacggcgtct atttacagct tcacgcctat atgctgcgga tcgccattcc
    10861 gtacggcacc ctatcgtccc ggcagctgcg catgctcgcc catgttggcc ggcgttatga
    10921 ccgccacttc ggccatttca ccacgcgcca aaacattcaa ttcaactgga tcaagctcga
    10981 ggaccttccc gacgccacgg ccgatctggc aagcgtcggc ttgcacggca tgcagacaag
    11041 cggcaataac gtgcgcaata tcacaaccga tcaatgggct ggagtggcgc cagacgagct
    11101 tgaggacccg cggatttggg cggagctgtt acgccagcac accaccttgc atccggaatt
    11161 ctcgttcctg ccgcgcaagt tcaagattgc cgtcacggcc gctgcgcacg atcgcgccgc
    11221 cgtcaaggtt cacgacgttg ggttgcggtt gcatcgcaat ggcgccggtg aaatcggctt
    11281 cgaggtgctg gtcggcggcg gattgggtcg cacgcccttc atcgccaagt cgatccggcc
    11341 gttcctgccc aagcgcgata tcctgagcta tgtggaggcg atattacgcg tctacaatca
    11401 attcgcgcgc cgcgacaaca tttataaggc acgcatcaag atcctggttc acgatctcgg
    11461 cgccgaggcg ttcgcccgcg aggtcgaggc cgagtggcag cacatcaagg atggcccgtt
    11521 ggcgctcgac ccggcggtgg tcgccgagat cgcggcgcgc ttccgctatc cggactatgc
    11581 acgcctcgac gacaatccgt cggaactcgc ccggcttcgc aacgccaacc gccgcttcga
    11641 tgcctggctc ggtaacgccg ttgccaacca caaggtgccg ggttacgcca tcgtgacgct
    11701 ctcgctcaag cccgagggtg gaccgcccgg cgatgcgact tcggaccaga tggatgcgat
    11761 cgccgacctt gcggatcgct attcgttcgg agagatccgg gtcggccatg agcagaatct
    11821 ggtattcccc cacgtggcgc agcgcgatct tccagaactg tggcgcgcgc tcgacgccat
    11881 cggggtcgcg atcccgaatg tcggtctggt ctccgacatc atcgcctgcc ctgggctcga
    11941 ttactgcagt cttgccaatg cccgcgccat accggtcgcc caggagctga cccgtcggtt
    12001 ccgcaatctt gatcttgccc acgatctcgg ccggctgcac atcaacattt cgggctgcat
    12061 caacgcctgc ggccaccatc atgtcggcca tattggcatt ctgggcgtcg agaagaacgg
    12121 cgaggagttc taccagatca ccctcggggg ccgtgccgac gagcgggcgg agcttggcgc
    12181 attgctggga cccgccgtgc cttacgggaa ggtcgctgac gtggtggagg aggtcgttgc
    12241 cgcctacctc gaactgcgcg aacggccgga tgaaaagttc gttgagaccg tcaagcgtct
    12301 cggtgtcgag cctttcaagg a
//
LOCUS       DATILV010000677         2191 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4761495, whole genome shotgun sequence.
ACCESSION   DATILV010000677 DATILV010000000
VERSION     DATILV010000677.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2191
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4761495"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(186..1583)
                     /locus_tag="VLJ17_16025"
     CDS             complement(186..1583)
                     /locus_tag="VLJ17_16025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24521.1"
                     /translation="MGEKSYPNLGRRIRRVAAAATAFTFLCQNIAWAVCADGSTFPAG
                     GFAVGQPPAAIWSPLVFTGTAGSIFVPDNSVFEHNDPGQPVTGGGHTWAFDQGSSTCK
                     ETDTGPAGGTPTAWAIPSNAGADCIFLPIIRNGIIVGFGDVPLQGQAVTPTCDPTLLS
                     QPGAPNPANTRLNQLGCAISHGVATTPQSATTFLFVTGIHSGLFVVWLANVANPVTGG
                     DAGKAVVFIDFYSDIPAGQMLTNAAASLEGMFAMATSIRRRPSVFACLNPLGDSGDPS
                     QPIDPNFSIPPASQVKCMSVGSNGQVVDVNTLFGPDNVPYFDGTTSVTSIPGGSAPTA
                     WPQCIFNGFSFPNPQPTTLMDKLKAVFNAHSANHCGIAQPITGLPPVNISHGSYMYGG
                     SVSGPVVQTKVTVDPITGLSHYTSRTYLSGLPGILTGVGIADDLKSLMAFIDSSGIGL
                     EVQEVVVKVPLCEDM"
BASE COUNT          464 a          634 c          648 g          445 t
ORIGIN      
        1 gagctacgga agcctccaga ggagacattt ccaaatgcgc cgacgccatc aggcggtgcc
       61 agcctaatca atgcacgcct cgccgccacg ttatggccgt gcagtccaca atggtactat
      121 tcctggctct gcttgctggc cgtgcggaac gaggagatgc gttccgcacg caccgtacac
      181 cctgcttaca tatcctcgca gagcggcacc ttgacgacga cttcctgaac ctccaatccg
      241 atgcccgagg agtcgatgaa ggccatcagc gacttaaggt cgtcggcaat gccgaccccc
      301 gttaatatgc cgggaagtcc gctgaggtaa gttcgagacg tatagtgcga caatccggtg
      361 atgggatcga cggtcacctt ggtttgcacg actgggccac tcaccgaacc gccgtacatg
      421 tatgatccat ggctgatgtt aaccggtggc aagcctgtga tgggctgagc tatgccgcaa
      481 tggttggcgc tgtgcgcatt gaagaccgcc ttcagcttgt ccatcaaagt agtcggttgc
      541 ggattgggaa aagagaagcc gttgaagatg cattgcggcc acgcagtcgg agccgaaccg
      601 cccggaatgc tcgttacgct ggtcgtacca tcaaaatagg gcacgttgtc gggaccgaag
      661 agagtattca cgtcgaccac ttggccgttg cttccgaccg acatgcattt gacctggctt
      721 gccggaggga tcgagaagtt cggatcgatt ggctggctgg gatcgcccga atcgccaagc
      781 ggattgagac atgcaaagac agatggtctc ctgcggatcg aggtcgccat ggcgaacata
      841 ccttcgagac tcgcggcggc gttcgtgagc atttgccctg cggggatatc tgaataaaag
      901 tcgatgaaga caacagcttt gcccgcatcg ccgccggtga ccgggttggc gacattcgcc
      961 agccaaacca caaacaggcc gctatggatg ccggtcacga acaaaaaggt ggtggcggat
     1021 tgcggcgtgg tggcgactcc gtgggagatc gcgcacccga gttggttgag cctggtgttg
     1081 gccggattgg gagcgccggg ctggctcagc aaggtcggat cacaggtcgg cgtgacggcc
     1141 tggccctgga gggggacgtc accgaaaccg acgattatgc cgttcctgat gattggcaga
     1201 aagatgcagt cagccccggc gttcgatggg attgcccaag ccgtcggcgt tccgccggca
     1261 ggtccagtgt cggtctcctt gcaggttgac gagccttgat cgaatgccca ggtatgcccg
     1321 ccgccggtca cgggctggcc cggatcgttg tgctcgaaga ccgaattatc cggaacgaag
     1381 atcgacccgg cggtaccggt gaaaaccaac ggcgaccaga tggccgcggg tggttgacca
     1441 acggcgaagc ctccagccgg aaacgtcgag ccgtccgcac atacagccca cgcgatattc
     1501 tgacaaagga aggtaaacgc agtcgcggct gcagccactc gccgtattcg cctgccgaga
     1561 tttggataac tcttctcgcc cattatatgg cctcccggtc aaatagcatg aaaaacaact
     1621 ttgccgtttg caaccataac atgaaccctg cggctcaata cagttggacc ctggatgctg
     1681 aactttggta cggccatttc tactttggtc catcgcgggt tctactttgg tcccatcgct
     1741 gttgctgcgg ctacaacatc ggtgatttcg aggttgtctc ttcggacaag cgccttagtg
     1801 tccggttcgg gtcgatgctg tcgaaaaaag ttttctggca ggtgaactat atttttcagc
     1861 ggccggcgcg tcccacgcgc gccaatgtga gggaccacat cgggatcata agaaggccac
     1921 cgcagaactt cgtacgtgtc ctactaaggc tcgcagcagc gcagcgagct gaaaaccgac
     1981 tttcgcgaga ttttgggagc tgctcaattt tcgcggtccc gcgcttctgg ccccccagcg
     2041 tatgcattct gccgcacatc catcgcgcct agaagtcaga ccggtcctga cacgcttaca
     2101 aaccgcggcc tgaatccctt atctgtcgcc tcgatgtatc caccgaacgg cgcaccgacg
     2161 tgacccggca gcaccaacgc gccagtcgag g
//
LOCUS       DATILV010000678         3380 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2972401, whole genome shotgun sequence.
ACCESSION   DATILV010000678 DATILV010000000
VERSION     DATILV010000678.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3380)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3380)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3380
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2972401"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1285)
                     /locus_tag="VLJ17_16030"
     CDS             complement(<1..1285)
                     /locus_tag="VLJ17_16030"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acyl-AMP ligase"
                     /protein_id="HSV24522.1"
                     /translation="MLDSRRPPFFTSLVDLLRYRATKQPNDRAYVLLSDQGQEESVLT
                     FAELDQRASDVAARLAHGQIGDRALLLFGPGLDFIIAYFGCLLAGVIAVPMMLPRRNS
                     SLDSSASILADCSPRFALTNAHLGSARPDVLERFQGYKMEWLILDQESGRLLDQNRLL
                     PTPGPEDIAFLQYTSGSTSDPKGVMVTHGNLIENLEMIRLTLDNTGQSTYVNWVPLYH
                     DMGLILNVLQALYVGAPCVLLAPVTFIQRPLQWLRAIHNYRAEVAGGPNFAFDLCVRR
                     FRADQVKDLDLSCWKVAFNAAEPVRADTIERFAATFSPYGFEPRAMCSLYGMAEATVL
                     ISGGGRGAGPVIRTVSREGFQRHQVAAPAGHDDAHRVVGCGRNIIGQRIAIVDPETRR
                     RLAADHIGEVWVGGPHICKGYWGNPATTRSTFHARI"
     gene            complement(1647..2387)
                     /locus_tag="VLJ17_16035"
     CDS             complement(1647..2387)
                     /locus_tag="VLJ17_16035"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004801 - transaldolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HSV24523.1"
                     /translation="MSRVADLKVKIFADGADYEGIVKMSKNSAIKGFTTNPTLMRKAG
                     VSDYEAFARKVLAAIPDRPVSFEVFADDFASMAEQARTIAAWGPNVNVKIPVTNTKGQ
                     SASELIRALSSEGVALNVTAIFTLDQVRTVVEALHPATAAIVSVFAGRIADTGVDPIP
                     HMRACKQITTSRPKAELLWASTRELLNIFHAEQSGCDIVTVPNEFLSKLDLVGKDLAE
                     YSRETVQSFYRDAAAAAYQIKTTRFAAE"
     gene            complement(2384..2920)
                     /locus_tag="VLJ17_16040"
     CDS             complement(2384..2920)
                     /locus_tag="VLJ17_16040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014891557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HSV24524.1"
                     /translation="MFLDRDGVIVVPEFRDGRSFAPRRLEDFRLYPDAAASLQKLKQA
                     GFLLAVVTNQPDVGDGLIGHSEVDAMHEIMTRQLPLDAVKACFHGHGQACDCRKPKPG
                     MILQTAMELGINLAKSFMVGDRKSDIEAGRAAGCATVFIDLGYTLPAPDAPDYVVHSI
                     AEAANVIIETVLTTQEGP"
     gene            complement(2947..>3380)
                     /locus_tag="VLJ17_16045"
     CDS             complement(2947..>3380)
                     /locus_tag="VLJ17_16045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sugar isomerase"
                     /protein_id="HSV24525.1"
                     /translation="CSHAVNDFRKLCGIETYSPVDNVSELTARTNDEGWDTVFAAWLD
                     TSHLGDKDAILIYSVGGGDAERKISANIIQAIDLAKARSAKVFGIVGRDSGYTAKHGD
                     VVVLIPQVNPNWVTPLSEAFQAVVWHCLVSHPALQRRQTKW"
BASE COUNT          688 a         1012 c         1008 g          672 t
ORIGIN      
        1 cgatccgcgc atgaaatgtc gatctggtgg tggccggatt gccccaatag cctttgcaga
       61 tgtgaggtcc gcccacccac acctcgccga tgtggtcggc tgcgagccgc cgccgggttt
      121 ccggatccac gatcgcgatg cgctggccga taatatttcg gccgcagccg accacacgat
      181 gcgcatcgtc gtggcctgcg ggagcggcaa cttgatggcg ctgaaagccc tcgcggctga
      241 ccgtccgtat gaccggcccg gcgcccctgc ctcctcccga gatcaatact gtcgcttcgg
      301 ccatgccgta gagcgagcac atggcccgcg gctcgaagcc ataaggacta aacgtcgctg
      361 caaaccgctc gatggtatct gcccgaaccg gttcggcggc gttgaatgcc actttccagc
      421 atgacagatc gagatctttc acctgatctg cgcgaaatcg ccgaacacaa agatcgaatg
      481 caaagtttgg ccctcctgca acctccgccc ggtagttatg gatggcgcgc aaccattgca
      541 gcggacgctg gatgaatgta accggcgcta gtaacacaca aggcgcgccg acatagagcg
      601 cctgcaaaac attcaggatg aggcccatat cgtgatagag cgggacccag ttcacgtagg
      661 tggattgtcc cgtgttgtcg agggtcagac ggatcatctc gaggttttcg atgaggttgc
      721 cgtgagtgac catcacgccc ttggggtccg aggtcgagcc ggacgtgtac tgtagaaaag
      781 cgatatcctc aggtccggga gttggcagca atcggttttg gtcgagcaaa cgccccgatt
      841 cttgatcgag aattagccat tccatcttgt atccttgaaa tcgctcaagg acatccggcc
      901 gagcgctgcc taaatgcgca ttcgtcagcg caaagcgcgg ggagcaatcg gcgagaatgc
      961 tcgcgctcga atcaagcgag ctgttgcgcc ggggaagcat catcggtacc gcgatgacgc
     1021 ccgcaagcag acaaccaaaa taggcaatga tgaaatcaag ccccggtccg aacagcagca
     1081 gggcacgatc accaatttga ccgtgggcca atcgtgccgc cacgtcactg gcgcgctgat
     1141 cgagctctgc gaacgtcaaa accgattctt cttgcccctg atccgacaag agtacatagg
     1201 cgcgatcgtt cggctgcttc gtagcccgat aacgaagtag atcgacgagg gaggtgaaga
     1261 acggtggccg acgcgagtcg agcatttaac cgaccggccc tttcgccctg ctcttcgaga
     1321 tatgacgctc agcgacgtgc cgggcaagtt cagcgggcgt tggatatgcg aatacgattt
     1381 cagtggggag ctcgacccca agccactcct cgagctccat gaggaagaaa accgatgcgg
     1441 cggagtccat cccgagacga gcgaacttcg cgtgcgggcg gatacgatcg actggcgtct
     1501 taaaggtcct agccagatat gccatgcacc aatcgaggat ctcggattcg ctcggatttg
     1561 atttcacaga gcatttcact gttcaaggtc aacgcctagc gccggccggg atcatggacg
     1621 tcgttgatcg tcgtcgctcc tccatcttac tcggcggcga agcgggtggt cttgatctga
     1681 taggcggcag ccgcagcgtc gcgatagaag gactgcactg tttcgcgcga gtattccgcc
     1741 agatccttgc cgacgagatc gagcttgctg aggaactcgt tcggcaccgt gacgatgtca
     1801 cagccgctct gctcggcatg gaagatgttc aagagctcgc gggtgctcgc ccaaagcaat
     1861 tccgccttgg gacgcgaagt ggtgatttgc ttgcacgcac gcatatgcgg gatcgggtcg
     1921 acgccggtat cggcgatgcg tccagcgaaa accgagacaa tcgccgccgt tgccggatgc
     1981 agcgcctcga caacggtgcg gacctgatcg agggtgaaga tcgcggtgac gttgagcgcc
     2041 acgccttcgg acgacagcgc gcggatgagc tcgcttgccg actgcccctt ggtgttggtg
     2101 accggaatct tcacattcac gttcggcccc catgctgcga tcgtacgcgc ctgctcggcc
     2161 atgctcgcga agtcgtcggc gaagacctcg aacgacaccg gccggtcagg gatcgcggcc
     2221 agcaccttgc gcgcgaacgc ctcgtaatcg ctcacgccgg cctttcgcat caacgtcgga
     2281 ttggtggtga agcccttgat cgcggaattt ttcgacattt tgacgatgcc ctcataatcg
     2341 gcaccgtcgg cgaaaatctt gaccttaaga tcggcgaccc ggctcatggc ccctcctgcg
     2401 tggttagaac ggtttcgatg atgacgttgg cagcttcggc gatcgaatgc acgacatagt
     2461 cgggagcatc cggcgcgggt aacgtatagc cgagatcgat gaacacggtg gcgcacccgg
     2521 ccgcgcggcc cgcttcgatg tcgctcttgc ggtcacccac catgaagctc ttcgcaaggt
     2581 taatcccgag ttccatcgcc gtctggagga tcatgcccgg ctttggcttg cgacagtcgc
     2641 aggcctggcc atgcccgtgg aagcacgcct tgacggcatc gaggggcaat tgacgcgtca
     2701 tgatctcgtg catcgcgtcc acttccgagt ggccgatcaa gccgtctccc acgtccggct
     2761 ggttggtgac taccgccaag agaaaacccg cctgctttag cttttggagg ctggccgcgg
     2821 catcgggata cagcctgaaa tcctccaacc gtctcggagc gaagctgcgc ccgtcacgga
     2881 attcaggaac gacgattacc ccgtcccgat cgagaaacac ggccggtctc attccgtgga
     2941 cagggcttac catttcgtct gcctgcgctg caaggctgga tggctgacga ggcagtgcca
     3001 gaccacggcc tggaaggcct cggacaaggg cgttacccag tttggattga cttggggaat
     3061 caggacgacc acgtcgccgt gcttagcggt gtatccgctg tcccggccca cgatcccgaa
     3121 cacctttgcc gaacgcgcct tggccagatc gatcgcctgg atgatattgg cactgatctt
     3181 gcgctcggca tcgccgccgc caaccgaata gatcaggatt gcatccttat cgccgagatg
     3241 actggtgtcg agccatgctg caaagaccgt atcccatccc tcgtcattgg tgcgtgcagt
     3301 gagctccgag acgttgtcaa ccgggctgta ggtttcgatc ccgcagagct tgcgaaagtc
     3361 attgacggcg tggctgcaat
//
LOCUS       DATILV010000679         1801 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3739891, whole genome shotgun sequence.
ACCESSION   DATILV010000679 DATILV010000000
VERSION     DATILV010000679.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1801)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1801)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1801
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3739891"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..791)
                     /gene="dctP"
                     /locus_tag="VLJ17_16050"
     CDS             complement(<1..791)
                     /gene="dctP"
                     /locus_tag="VLJ17_16050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein DctP"
                     /protein_id="HSV24526.1"
                     /translation="MTISRRNILSGVLAAPALIASARMGSLAAAQTLKISHQFPGGTI
                     NEGDFRDRLCRKFGAELEKRTNGAVTAQIYPNSSLMKTVAQFSAVRKGALDLSLYPIS
                     YAGGEYAELNIGLMPGLVSSYAQGAAWKNSAVGQKFSTFLAEKGVIILSWIWQAGGVA
                     SRNTPIVNPQDAKGLKVRGGSREMDMVLQAAGATTLTTPSNELYAAMQTGACDAAITS
                     STSLISFRLEEVAKSLTTGRGKSYWFMLEPLIMSKQIFDAMPKAQ"
     gene            957..1715
                     /locus_tag="VLJ17_16055"
     CDS             957..1715
                     /locus_tag="VLJ17_16055"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HSV24527.1"
                     /translation="MTRTDATATSIDVLSTLALRGVLVEIADEFRTLTGLSFAATYKS
                     TNMALNLIAQGATADMTIITREAVDQLARDGIIVAASTADLAQSGVGIAVRAGASKPD
                     IGTVAALKRTLLEAQSIAFSRLGASGVHFAGVIERLGIADEVRRKAHISDSYVGEVTA
                     RGEAEIAVQQISELMPVAGIDIVGPLPDEVQKISVFAAGIFRAARDPGGAEKLISYLA
                     APRLASVLIRKGLEPARSVSLASDRNRGSPDRAV"
BASE COUNT          347 a          545 c          550 g          359 t
ORIGIN      
        1 tgctgcgcct tcggcatggc gtcgaatatc tgctttgaca tgatcagcgg ctcaagcatg
       61 aaccagtagg acttgccgcg cccggtggtg agactcttgg ccacctcctc aaggcggaac
      121 gagatcaggc tggtggagga cgtgatggcg gcgtcgcagg cgccagtctg catcgcggca
      181 taaagctcgt tcgacggtgt cgtgagcgtg gtggcaccgg cagcctgaag caccatgtcc
      241 atctcgcggc tgccgccgcg gaccttcaat cccttggcat cctgcggatt gacgattggt
      301 gtattgcggc tcgcaacgcc gccagcctgc cagatccagg acaggatgat gacccccttt
      361 tcggccagga aggtactgaa tttctgtcct accgcggaat tcttccacgc cgcgccttgc
      421 gcgtaggaac ttaccagtcc aggcatcagc ccgatgttca attcagcgta ttcgccgccc
      481 gcataggaga tcgggtagag gcttaaatcg agtgcacctt ttcgcacggc cgaaaattgt
      541 gccacggtct tcattaatga ggaattggga tagatctgcg ccgtaacggc accattggtg
      601 cgcttttcaa gttccgcgcc gaacttgcgg cacagccggt cgcggaaatc gccttcgttg
      661 atggtaccgc ccgggaactg gtgcgaaatc ttgagcgtct gggccgccgc aagcgagccc
      721 atgcgggctg aagcgatgag ggccggcgcc gccagcaccc cggacaatat gttgcgtcgc
      781 gatatcgtca cggcattcct ccattattgt tttcgcctgg aatttcaaca tcgaacggta
      841 gcttagcgtg aaagtcaaaa aatgtcgcta ccctggactt cggcttggag ccgcgacata
      901 gcaatggcgc tcattcgccg cagcgggatt acctgcaagc tggagagagg caatacgtga
      961 cccggaccga cgccaccgca acttcgatcg acgtgctcag caccctcgcg ttgcgcggcg
     1021 tgttggtgga aatagcggac gaattccgca cccttaccgg gctctccttt gcggcgacct
     1081 acaagtcgac caacatggcg ctcaacctca ttgcacaagg cgcaactgcc gatatgacca
     1141 tcatcacccg cgaagcggtc gatcagcttg cgcgcgacgg tatcatcgtc gctgcaagca
     1201 cggcggacct tgctcagtcg ggcgtcggga ttgccgtgcg ggccggcgca tcgaagcccg
     1261 atatcggcac ggtcgcggcc ctcaagcgca cgcttctgga ggcccaatcg atcgcctttt
     1321 cgcggctcgg tgccagcgga gttcatttcg cgggcgtgat cgagcggctc ggcatcgcgg
     1381 atgaagtgcg ccgcaaggcc cacatcagcg actcctatgt gggcgaggtg accgcacgag
     1441 gcgaagccga gatagcggtg cagcagatca gcgagttgat gccggtcgcc ggcatcgaca
     1501 tcgtcgggcc tttaccggat gaggtgcaga aaatatcggt gttcgccgcc ggcatttttc
     1561 gcgctgcgcg cgatccgggc ggagccgaga agctcatctc ctatctggcc gccccccggc
     1621 ttgcatcggt gctgatccgc aaggggcttg agcctgcccg atccgtttcg cttgcctcgg
     1681 atcgcaatag gggaagcccg gatcgagcag tataaatcgg gcaccagcgg ttcattatcg
     1741 cgattgccgg attgcggagc cgcgaagaat cagttccttc agtcaggcta cgaacccggc
     1801 a
//
LOCUS       DATILV010000680         5860 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4504321, whole genome shotgun sequence.
ACCESSION   DATILV010000680 DATILV010000000
VERSION     DATILV010000680.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5860)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5860)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5860
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4504321"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(566..883)
                     /locus_tag="VLJ17_16060"
     CDS             complement(566..883)
                     /locus_tag="VLJ17_16060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24528.1"
                     /translation="MPLSMSAAILGAQLIVTVADRVPNLDFAPGCQQAVTVTTASMKS
                     CLRDERNARKVLTRSWARFAPQEQMRCTEETNLDGTPSYVELLTCLQIAAEARKLPAR
                     AKW"
     gene            complement(1139..1744)
                     /locus_tag="VLJ17_16065"
     CDS             complement(1139..1744)
                     /locus_tag="VLJ17_16065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013418642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF308 domain-containing protein"
                     /protein_id="HSV24529.1"
                     /translation="MSAAIPRLEEIGLDGREAIRSHWVLFLLQGLIMVVLGLLALFEP
                     MVATLAVEIFAGWLFLVSGVVGVVGVLRARRVPGFWWGLITALLALALGLYLIWHPLA
                     GVLSLTLAVAAFFCAQGIVQVITSIGYRSVLSSWVWMLFGGIVNLILAAIILSGWPGT
                     AAWTLGLLFGINLFMWGLSLVMTALACRAVHDAPQATQPAT"
     gene            complement(2761..2937)
                     /locus_tag="VLJ17_16070"
     CDS             complement(2761..2937)
                     /locus_tag="VLJ17_16070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24530.1"
                     /translation="MIGSRGGVVGSDGLFWAMRRSCVIDEFEKNRPIDGDSCQSDTRF
                     ESRDFPFEIKSEKI"
     gene            complement(3144..3674)
                     /locus_tag="VLJ17_16075"
     CDS             complement(3144..3674)
                     /locus_tag="VLJ17_16075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24531.1"
                     /translation="MSRIPTHTVEDAPAASRPLLQKIVEATPMGRPANLHAQMAHSPA
                     VLTAYTSLRAVLADHTSFDPKVGAALTLAAAAEVGNSYMILIASRLAQMNGWTEEQVT
                     ALTTGTSTNDAKIDGLAGLVREAAANSGNVTDAIWKAAQQAGWSDEQLADAFAYLGAT
                     VFTGYFLNYAQTDLDI"
     gene            complement(3742..4194)
                     /locus_tag="VLJ17_16080"
     CDS             complement(3742..4194)
                     /locus_tag="VLJ17_16080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011505000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSV24532.1"
                     /translation="MVGSTKPRAIGFNHVALEVGDIEEALAFYGRIFDFQLRGKSKTM
                     AFIDLGDQFIALQAGRKQPADDDRHFGLVVDDKEAARAALKAAGVKPIDGPFLDFRDP
                     WGNRIEIVGYDNIQFTKAPNVLRGMGLTQLTKNESAKRELAEKGMAVS"
     gene            complement(4863..>5860)
                     /locus_tag="VLJ17_16085"
     CDS             complement(4863..>5860)
                     /locus_tag="VLJ17_16085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008838720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nucleotidyl transferase AbiEii/AbiGii toxin
                     family protein"
                     /protein_id="HSV24533.1"
                     /translation="AERQLQPTTLERVIRLIDILDAFGADTLIGPRIALKGGTALNAF
                     HSDLDRLSVDIDVNYVGAIEKERMDADRPGLEDQIERLMESKGYAARRGPSEHAGGKW
                     IYRYASALGGAGTIEIDINYLFRGPLYGVDRMASAPIGSYQAANVPVLDIHEIVAGKM
                     VALVTRRAARDLFDAHRIIAMPDLDWAKIKVATLMIGASAKSFDWRTASCQAIECEVG
                     DITGKLTMCLHDRYFNAFGGPANWIATLTAECRDKLAPLFQLTAGERAFLDAVLDQGE
                     IDASSLDVPESVRVAIEACPALQWKVQNIRAWKAGDKSLAPRVRRGHRPPEEPTL"
BASE COUNT         1219 a         1776 c         1654 g         1211 t
ORIGIN      
        1 gatgcagcgg acctccattt tgccgcccga acatcttgct gaaagcggcc cttcaattga
       61 tccggggtgg cccgagggcc gtccggacgc gtctgaggtt acgattagcg atgaagtttg
      121 gatcggcgaa ttcctctacg accggcgccg cgatgagttc agcttcttgg ccttggcctc
      181 gcgcaggaac ttttcaacga gatgccgcag cgtcgcagcg aatgttccga caattgcaag
      241 ggccagccat tgtggaatat gcaggccgat gctaatgcga agtccatgcg accaactccg
      301 tataggttgg tcgcgggata tcgtacaaaa tcatgcgctg aatctccgcg cgctcgtgac
      361 cttcagttgg cgctgctgtt tccaaaatag gctatatcca ggacgcgcgg acaaccggcg
      421 taccgtcagc gatccggtcc cgaataatat ttgcggtaca tgggcgttgc tggcccggct
      481 gagtttcggg atcgctaatc gcattgcgtg agatatgcca tgtttacgag tggcggcgtc
      541 cgcatttacc cgtttggtct tgcttttacc acttggcacg tgccggaagc ttccgcgctt
      601 cagcagcgat ctgaaggcac gtcagcaatt caacataact tggggtaccg tccaagttcg
      661 tctcctcggt gcatctcatc tgctcctgcg gcgcgaagcg tgcccacgac ctggtgagca
      721 ccttacgtgc atttcgctcg tccctgaggc aacttttcat ggaagcagtt gtgacagtca
      781 cggcctgctg gcaacctggc gcaaaatcga gattgggcac gcgatcagcg actgtgacga
      841 tcaactgcgc gcccaggatg gcggcggaca tggaaagcgg catgatgaca atctcctgat
      901 tggaaccgtt gccgagcttt gacccgttgg aagactgccc ttgtcgacct tcgcaacgca
      961 gtcattgccg tcaagcagcc taatggtcgg gttacgctca accagctgta tcacctcacg
     1021 tgagagggga attcggtaac gaccgggtca ctcatggtgt gctcctccgc catctgaact
     1081 cgcgcgttga cgccaatcgt accaaagcct tcatggcttc gctgcgcata tcacctgttc
     1141 atgtggcggg ctgcgtcgcc tgcggagcat cgtgcacagc gcgacaggcg agcgctgtca
     1201 tcaccaatga caggccccac atgaacagat tgatgccgaa cagaagcccg agcgtccacg
     1261 cagccgtgcc tggccagccc gacaagatga tcgctgccag aatgagattt acgatgccgc
     1321 cgaacagcat ccaaacccac gacgaaagca cgctgcgata cccaattgag gtaatgactt
     1381 gcacgatgcc ctgcgcgcag aagaacgcgg cgacggcaag ggtaagcgaa aggacgccgg
     1441 cgaggggatg ccagatcaga tataagccga gggcgagcgc cagcaacgcg gtgatcaatc
     1501 cccaccaaaa gccgggcaca cggcgcgccc ttaacacgcc gacgactccg accacgccgc
     1561 tgacaaggaa tagccagccg gcgaatatct ccaccgccag cgttgcgacc ataggttcga
     1621 acagggcaag gagcccaagc accaccatga tcaagccctg gagcaagaac aggacccaat
     1681 ggctacggat cgcttcgcga ccatcgagtc caatttcttc cagtcgtgga attgctgccg
     1741 acatgaaatc ctcctgacaa tcgagttttc aacgtgcgtg tgtggctctg cttttttgga
     1801 agagagttaa accgcatgat cttgtcagcc tgctattgca agatatgccg tggcgcatat
     1861 ccgcaatggc ggatgccgct gctggcgcta gtgtcggccg gctataagaa gcgggccgca
     1921 tattacgcgt cgccgatatg gccaacatcg tgccaaacca aaaccgctca ttggcgatta
     1981 tgatgctgaa ttgattctgg agatattggc cttagggcca atatacgacg gcatgcgtgc
     2041 tttggtattt tgctgctgct ttgctattga ttaagtcgac agggagcagt cgaggattgc
     2101 gtcaggaaaa acctcctgtg ccgtgagcat gagccatgag ccaatagcga cacgacaatg
     2161 agcaaagcac gcccggcggt cggttcggtc gaacatgatc gcaatcgggc agacgccctt
     2221 gcggattgaa tactgacccg tcatcaatgc cgcttgcgat ggtgtgcagg ccggctcaac
     2281 caaaaactgg gggaggcgca attcttcgcg agccgatcgg agacgcgggt gtcggtgcgc
     2341 cgcgcagctc tcctccacca catgacctaa gtcagcgtaa tcgacgttat cagcgcctca
     2401 acgcaaagtc ccaatcggcc gcttgcgttt gatcatgaaa agacgaagca agcacgtccg
     2461 cgaccaccac gccggagcgc ccgagcgcga catcaatgag tctgctcgcc acacgctcgc
     2521 cctaaaatga agagaaatgc gttcttgaat taaggaaatg ggacgttcaa aacgttgtgt
     2581 tgatagtcaa caaactggcg ataaaccctc cattttgcca aaactctttg attcccttcc
     2641 aaagctctcc gaggtatcgc atactcttca ctcccactct attctctcaa cgcatcgtaa
     2701 cgcgctgatt tataagcgca aaagtgttct gctgacggtc aaaatccgac cgtcagtccg
     2761 tcaaattttt tcactcttga tttcaaaggg aaaatcgcgc gattcaaatc ttgtgtcact
     2821 ttgacaacta tcgccatcga tcggtcgatt tttttcgaat tcgtcgatca cgcaggaccg
     2881 acgcatcgcc caaaaaagac cgtcagagcc gacaacacca ccacggctgc cgatcatacc
     2941 cggcgctccc gcacttcggc ctgacagcaa tcggagctgt gctcagaacg gtatcaccta
     3001 tgatgaggtc ggctgcgcag agatcggcag ttgcggtcgg atgcatcaga cccatccact
     3061 tcatcagacc catcctggac atcgccaaac ggctgaagcg cgctgatcca cgatactgct
     3121 ccgccgcaaa ccacttgacg agatcagata tccaagtcgg tttgcgcgta attgaggaag
     3181 tatcccgtga acaccgtcgc ccccaggtaa gcaaacgcgt cggctaactg ctcatcgctc
     3241 cagccggctt gctgagcggc cttccagatg gcgtcggtaa cgtttcccga attggcagcc
     3301 gcttccctga ccaggccggc cagcccatcg attttggcgt cgtttgtcga ggtgcccgtc
     3361 gttaaggcag tgacctgctc ttcggtccag ccgttcatct gggcgagccg actggcgata
     3421 aggatcatgt agctgttgcc gacctcggcc gcagccgcga gagtcagggc cgcacccacc
     3481 ttcgggtcga agctggtgtg gtcggcaagc acggcgcgca gcgacgtgta ggctgtcagg
     3541 accgccggag aatgcgccat ctgcgcatgc aggttcgcgg ggcgtcccat cggggtggcc
     3601 tcgacgatct tttgcaggag cggccgggat gcagcggggg cgtcctcgac ggtgtgggtt
     3661 gggatgcggc tcatcgatat cacctcgttc gttgattgct gaatgcgtcg gacgcggcga
     3721 cgtcctgggc gccttgagcc tctagctcac cgccatccct ttttccgcca gctccctttt
     3781 cgcgctctcg ttcttggtca gttgggtcag acccatgccg cgcagaacgt ttggagcctt
     3841 ggtgaactgg atattgtcat agcccacgat ctcgatgcga ttgccccagg ggtcgcggaa
     3901 atccagaaac ggaccgtcga tcggcttgac ccccgcagcc ttgagggcgg cgcgcgccgc
     3961 ctccttgtcg tcgacaacga ggccgaaatg cctgtcgtca tcagcgggct gtttgcgtcc
     4021 cgcctgcaac gcgatgaatt ggtcgccaag atcgatgaag gccatcgtct tgctcttgcc
     4081 gcgcaattga aaatcgaaga tgcggccata gaatgccagc gcttcctcga tatcgccgac
     4141 ttccagcgct acatggttga aaccgatggc gcgcggcttt gtggagccaa ccatttaagc
     4201 ctcctcttgt aatccttaac gtccaagaag cggcatctcg cggctgcatt ggcagcatac
     4261 agcggacgcc ctatgcgcct tgcagaagtg tgttccagtc ctgcgccttc gcccaagact
     4321 cgaaatcgtg aaaggcgcca aaaaccagca ggtctcgtca ggaagcagcg gataaacacc
     4381 cgccacgaaa tcgccgccag aaccgcgtgc gccctcgccg cgcagatgct tttcgatgat
     4441 gccgtcggtg accgggatga aggcttgatg agggcattcc ccacatttga cctggggctt
     4501 gccgcatatc cccttaaccc actcgttggc gcatgcgggc gcggtctttc gattttccca
     4561 cctgacaggg aatacgtcag cgcggcccgc gaataggcgc cgaaatagcg caaccttttc
     4621 cgcggcgggt gacgcggctg tcaccctcgg cgcatgtgca gtggcgggtg acgaataatt
     4681 cgcgaccgtc gtcgagcgcc ggctcacgag atctcttagc gtggcctcga gctctttccg
     4741 ttccgcctca tttggggcca aacgggctcg aatctggtca atctcgacct cgggttcgtg
     4801 cgcagcctcg acgccagcgc ccggcgtcag tcgttcccgt acatctccgc tcggccgagt
     4861 cttcacagcg taggctcttc gggcggtcga tgccctcgtc tcacacgcgg cgccagcgac
     4921 ttgtcaccgg ctttccaagc tctgatgttc tgcaccttcc attgcaatgc tggacaggct
     4981 tctatcgcga cgcgtacgga ttccggcacg tccaacgaag acgcatcgat ctctccctgg
     5041 tccagtacgg catccaaaaa cgccctctct ccggctgtca gctgaaacaa tggcgcgagc
     5101 ttgtcgcggc attcggcagt gagggtcgcg atccagttgg ctgggccgcc gaaggcattg
     5161 aaataacgat catgcagaca catcgtcagc ttgccggtga tgtcgccgac ctcgcactcg
     5221 attgcttggc acgatgcggt acgccagtcg aagctcttgg cgctcgcgcc gatcatcaac
     5281 gtggccacct taattttcgc ccagtcgaga tcaggcatgg cgatgatccg gtgtgcatcg
     5341 aacagatcgc gcgccgcccg gcgcgtgacc aacgcgacca tcttaccggc gacgatctca
     5401 tggatgtcga gaaccggcac attcgccgct tggtacgatc cgatcggcgc cgacgccatg
     5461 cgatccacac cgtaaagggg accgcggaag aggtagttga tatcgatctc gatggttccg
     5521 gcgccgccga gcgcggaagc atagcggtag atccatttgc ccccggcatg ctcggacggc
     5581 ccgcgtcgag cggcatagcc tttcgattcc atcagccgct cgatctgatc ctccaatccc
     5641 ggccggtccg catccatgcg ctccttctcg atcgcgccga catagttgac gtcgatatcg
     5701 accgagaggc ggtcgagatc ggaatggaaa gcgttgagtg ccgtgccgcc tttcaaggcg
     5761 atccgcggcc cgatcagcgt gtcggcgccg aaggcgtcga gaatgtcgat cagccggatc
     5821 acacgctcca gcgtcgtggg ttgaagctgc cgctcggctg
//
LOCUS       DATILV010000681         2033 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4504868, whole genome shotgun sequence.
ACCESSION   DATILV010000681 DATILV010000000
VERSION     DATILV010000681.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2033)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2033)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2033
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4504868"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..760)
                     /locus_tag="VLJ17_16090"
     CDS             complement(<1..760)
                     /locus_tag="VLJ17_16090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007605266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate ABC transporter
                     substrate-binding protein"
                     /protein_id="HSV24534.1"
                     /translation="MSAEVPTPRPNKQPVHQWLLETNRGQLLLFALLTLILTVATVWG
                     GRIWLRNSETVTFAVGNANAPEARFATKLAAVLKNNSSRLRLKIVSNPDMAKALGQFD
                     RREADVVVLRTDARIPTRARALAILEHDVVMLISPGSKKIKSLAELKKKKIAVLADGD
                     SNAAFVRNILEITEGAEGNARVQMAPANSTLDKLFSSGGYGAVVAVAHASAIVKDKSW
                     EQYAKRSQFTLNAIDEAKTLARRHPGISEETLAKG"
     gene            1175..1531
                     /locus_tag="VLJ17_16095"
     CDS             1175..1531
                     /locus_tag="VLJ17_16095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008974017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3307 domain-containing protein"
                     /protein_id="HSV24535.1"
                     /translation="MLLLTFKHVIADFVLQNSWMAIGKDQRKGWALPLLAHCLVHFAV
                     ALVLILIVAPRFWFVAVIDFAIHIMVDRAKGFVASRFGVTQELKHPWFWTLIGVDQAL
                     HHLTGFGLAIFMAANG"
     gene            complement(1543..2010)
                     /locus_tag="VLJ17_16100"
     CDS             complement(1543..2010)
                     /locus_tag="VLJ17_16100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSV24536.1"
                     /translation="MPSPFTVSDLRQRPQFFNSVADRIWRAWWQAQGIPLDHISGRLK
                     DNMTATPIPFTLVAHDGKIFLGTASVIASDLPERPQLTPWVAAVWVERSARRRGIGSA
                     LINRASQDCLALGFKSRYLCARPQMTLFYQRLGWNLVEQGVGDYRLNVFIQNA"
BASE COUNT          392 a          591 c          598 g          452 t
ORIGIN      
        1 tgcccttggc gagcgtttcc tcggaaatgc cgggatgacg tctggcgagc gtcttcgcct
       61 catcgatcgc attcagggtg aattgggagc gcttggcata ctgctcccag ctcttgtcct
      121 tgacgatcgc ggaggcgtgc gcaacggcga ccacggcgcc gtagccgcca gaagagaaca
      181 gcttgtcgag tgtcgagttc gccggcgcca tctgcactcg cgcattacct tcggcgcctt
      241 ccgtaatttc gaggatgttg cggacgaaag cggcgttgct gtcgccgtcc gcaagcaccg
      301 cgatcttctt tttcttcaac tcggcgagtg atttgatttt tttggatccg ggactgatca
      361 gcatgacgac gtcgtgttcg aggatcgcga gcgcgcgagc gcgggtcggg atcctcgcat
      421 cggtgcgcag caccacgaca tcggcctctc tgcgatcaaa ttgccccagc gccttggcca
      481 tgtccggatt ggagacgatc ttcaggcgca gtcgcgacga attgtttttg aggacggctg
      541 caagcttggt ggcaaagcgg gcctcaggcg cgttggcgtt gccgaccgca aaagtcaccg
      601 tttccgaatt tctcaaccag atgcggccgc cccagacggt tgcgaccgtc agaatcaacg
      661 tcaacaaggc aaacaggagc aattgcccgc gattggtttc gaggagccat tgatgcaccg
      721 gctgcttgtt cggacgtggt gttgggactt cagcgctcat ggctcatacc cgcaacctgt
      781 cgcgtcgtta ccgctcgccg ccgagggtcg cctgaacaag gccgtaaatg cctaaaaaag
      841 aacgacaatt tcgcgggaac atgatatccg ccattgcgcg gattgcaaat aagcccggac
      901 ggtaacctta ccggcggaac ccggcaggac ctatcagccg ccgcgcgagg gttgaaggaa
      961 tttcttgacg cttttcgggt tccattaacg tgcattccgg tacgggagat gtcataaaag
     1021 cgccatgccc gacgatttgt ccggggctta acaagaagtc gcgctgaacg cctcctgtcc
     1081 tttccctttg ttccaaagcg tgtctttcga gggcgtcagc ttgtcgtttc cccccatgtc
     1141 cgcatcggtt ccggtaggtg ctctgatcgg atggatgttg ctgcttacct tcaagcacgt
     1201 catcgccgat tttgtgctgc aaaattcctg gatggccatc ggcaaggacc agagaaaggg
     1261 atgggctctc cccttgctgg cccactgcct tgtgcatttt gcggtggcgc tggtgctgat
     1321 cctgattgtc gcgccgcggt tctggttcgt cgccgtgatc gattttgcga tccacatcat
     1381 ggtcgatcgc gccaagggat ttgttgcatc gagatttggt gtgacacagg agctcaagca
     1441 cccctggttc tggaccctga tcggtgtcga tcaggcactg catcacctca ccggcttcgg
     1501 tctggcgatc ttcatggcgg cgaacggctg atcccgcagg cgtcaggcgt tctggataaa
     1561 gacattcaac cgataatcgc ctacaccctg ctcgaccagg ttccagccca gcctttggta
     1621 aaagagcgtc atctggggcc gcgcgcagag atagcgactc ttaaatccga gcgcgaggca
     1681 atcctgcgac gcacgattga tcaaggcgct accgatgccg cgacggcgag cacttcgttc
     1741 gacccacacc gctgcgaccc acggcgtcaa ttgcggccgc tccggaagat cggatgcgat
     1801 caccgacgcg gtaccgagaa atatcttgcc gtcgtgtgca accagtgtga acggaatcgg
     1861 cgtagccgtc atgttatcct tgaggcggcc ggaaatatgg tcgagcggaa taccttgcgc
     1921 ctgccaccac gctcgccaga tacggtcagc cacgctattg aaaaattgcg gtcgctgccg
     1981 caagtcggaa acggtgaatg gcgagggcat ttgttcctat ccggcgctgc atg
//
LOCUS       DATILV010000682         3176 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_5017142, whole genome shotgun sequence.
ACCESSION   DATILV010000682 DATILV010000000
VERSION     DATILV010000682.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3176)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3176)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3176
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5017142"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..642)
                     /locus_tag="VLJ17_16105"
     CDS             complement(<1..642)
                     /locus_tag="VLJ17_16105"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSV24537.1"
                     /translation="MLSAIIITRNEAANVAACLESVAFCNERIVVDSGSDDDTVKIAM
                     AAGATVVTHPWAGFGAQKNFALSQACGDWVLSIDADERVPAPLAAEILSTIGSASCDG
                     YEIARLSTFLGRPMRHSGWFPDYVLRLFRREKARFSNDLVHERVICEGPIGRLCGALD
                     HHPVLRLEDAIARVDRYSTAGAEILAASRSRVSFASGVTHGLWSFLRAYIMRLG"
     gene            complement(733..1824)
                     /locus_tag="VLJ17_16110"
     CDS             complement(733..1824)
                     /locus_tag="VLJ17_16110"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009799177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HSV24538.1"
                     /translation="MISVTPRSIGPDATIGILGGGQLGRMLAMAAARLGFKCHVLCPE
                     PASPAFDVVRRVTEADYGDKSALDRFADDVDVITYEFENVPAETATFLAARKPVLPDP
                     RVLAVTQDRLAEKNFVVSLGIATAPYAAAESESELVRALSSIGRPAVLKTRRFGYDGK
                     GQVTLRCGDDASVAWAAVGGQPSIVEAYVPFEREISVVAVRGNDGKVECFDVAENEHS
                     SHILKISRIPAKVTPAVAVEARRIAGRIAEAFSYVGVLAVEMFVVADGTSHAVMVNEI
                     APRVHNSGHWTLDGCSVSQFEQHIRAVAGWPLAVPLRYGRAEMVNLIGEEITDYRRWL
                     DVPGACIHLYGKQTVRAGRKMGHVTRVFS"
     gene            complement(1821..2333)
                     /gene="purE"
                     /locus_tag="VLJ17_16115"
     CDS             complement(1821..2333)
                     /gene="purE"
                     /locus_tag="VLJ17_16115"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HSV24539.1"
                     /translation="MTVTWNSSKPVAVIMGSQSDWATMKHAADTLDALGIAYETRVVS
                     AHRTPDRLYAFAKGAKAAGFRVIIAGAGGAAHLPGMTASMTALPVFGVPVESQALGGL
                     DSLYSIVQMPPGVPVGTLAIGRAGAINAALLAASVLALHDDALAGRLETWRRRQTDAV
                     ADAPSNEGGT"
     gene            complement(2330..2536)
                     /locus_tag="VLJ17_16120"
     CDS             complement(2330..2536)
                     /locus_tag="VLJ17_16120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009799179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF465 domain-containing protein"
                     /protein_id="HSV24540.1"
                     /translation="MTEEEEIELKVQLERLRQEHRDLDAAIEALQAVPGADLVQVQRL
                     KKRKLALRDRITFIEDQLTPDIIA"
     gene            2928..3101
                     /locus_tag="VLJ17_16125"
     CDS             2928..3101
                     /locus_tag="VLJ17_16125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF465 domain-containing protein"
                     /protein_id="HSV24541.1"
                     /translation="MATSTQLAELEQRHRMLEDELAEALQHPSTDDCKLSELKRRKLQ
                     VKDQIARLNRSVH"
BASE COUNT          634 a          989 c          944 g          609 t
ORIGIN      
        1 ccccagccgc atgatgtatg cacgtaaaaa cgaccacagg ccatgggtta cgccgctggc
       61 gaaagaaact cgggatcgtg acgccgcaag tatctcggcg cccgccgtcg aatatctgtc
      121 cacccgggcg atggcatcct caagccgcag caccggatga tgatcgaggg cgccacaaag
      181 gcggccgatc ggaccttcgc aaatgacgcg ttcgtggact agatcgttgc tgaagcgcgc
      241 cttttcgcgg cggaacaggc gcaatacata atccggaaac cagcccgaat ggcgcatcgg
      301 ccgcccgagg aaagtggaaa gtcgggcaat ctcgtagcca tcgcacgaag ccgaaccgat
      361 cgtggacaag atttccgcgg cgagtggcgc cggcacgcgt tcatcggcgt cgatcgacag
      421 cacccaatcg ccgcacgcct gcgacaacgc gaagttcttc tgggcgccaa atcccgccca
      481 cggatgggtc acgacggttg cgccggctgc catggcgatc ttgactgtgt catcgtcact
      541 gccgctgtcg accacgatgc gttcgttaca aaatgcaacg ctttcgaggc acgccgcaac
      601 attggccgcc tcgttccggg taatgatgat cgcactcagc aacacgtcgt ttccaaacca
      661 tttttttggg gcgcgaggga ggccggttca cgccggcaag atgcgacgat cggcattttt
      721 ttaggccaag tgctaggaaa agacccgcgt gacatgaccc atcttacggc ctgcccgcac
      781 cgtctgcttg ccgtaaagat ggatgcaagc accgggcacg tccagccacc ggcggtagtc
      841 cgtaatctct tccccaatga gattgaccat ctcggcgcgt ccgtaacgga gcggcaccgc
      901 cagcggccaa cctgcgaccg ctcgaatatg ttgctcgaat tgcgataccg agcatccgtc
      961 gagcgtccaa tgcccggaat tgtgtacgcg cggggcaatc tcgttcacca tcacggcgtg
     1021 gctggtgccg tccgccacca cgaacatctc gaccgcgaga acgccaacat agctgaatgc
     1081 ctcggcgatc cggccagcaa tccggcgtgc ctcaacggcg accgccggtg tcactttggc
     1141 gggtatgcgc gaaatcttaa ggatatggct gctgtgctcg ttctcggcga catcgaaaca
     1201 ttcgactttg ccgtcgttgc cgcgcaccgc caccacggag atttcgcgtt cgaaaggcac
     1261 atacgcctcg acgatcgagg gctggccgcc gaccgcggcc cacgccacgc ttgcatcgtc
     1321 accgcagcgc agtgtcacct ggcctttgcc gtcgtatccg aagcgccgcg tcttaagcac
     1381 ggccgggcgc ccgatcgacg acagtgcccg gacaagctca ctttcggact ccgccgccgc
     1441 gtagggcgcg gtggcgatac cgagcgagac gacgaagttt ttttcggcca accgatcctg
     1501 cgtaacggcg agcaccctcg ggtcgggcag cacaggtttg cgggccgcga gaaatgtcgc
     1561 tgtttcggct ggaacgttct caaactcgta ggtaatgacg tcgacgtcgt ccgcgaaacg
     1621 atcgagagcg gatttgtcgc cgtagtcggc ctctgtaaca cgacggacca cgtcgaatgc
     1681 cggtgaggcg ggctcgggac acagcacatg gcacttgaaa cccaggcgtg ccgccgccat
     1741 agcgagcatg cggccgagct gaccgccgcc cagaatgcca atggttgcgt ccgggccaat
     1801 ggatcgcggg gtaaccgaga tcacgtgccg ccctcgttgg atggcgcatc agcgaccgca
     1861 tcggtctggc gcctgcgcca tgtttcgagg cggccggcga gcgcgtcgtc gtggagggcc
     1921 aatacgctcg ccgcgagcag cgcggcgttg attgctccgg cgcggccgat cgccagcgta
     1981 ccgaccggaa cgcccggtgg catctgcacg atcgaataga gcgaatcaag gccgcccagg
     2041 gcttgagatt cgaccgggac gccgaacacc ggtagggctg tcatcgaggc cgtcatgccg
     2101 ggcaggtgcg ccgccccgcc ggcgcccgcg atgatcaccc ggaagcccgc ggccttggcg
     2161 cccttagcaa acgcatagag ccggtccggc gtgcgatgcg cggaaacaac gcgggtctcg
     2221 taggcaatgc cgagcgcgtc gagcgtgtct gcagcatgct tcatggtcgc ccaatccgac
     2281 tggctgccca tgatgacggc gacgggcttt gaactgttcc atgtcaccgt catgcaatga
     2341 tgtccggcgt cagttgatcc tcgatgaacg taattcggtc acgcaatgcg agcttgcgtt
     2401 ttttcaggcg ctgaacctgg acaagatcgg cacccggtac ggcctgcagc gcttcgatcg
     2461 cggcgtcaag gtcgcggtgc tcctgccgca acctttcgag ctgtaccttc agctcgattt
     2521 cttcttcttc ggtcattcgc agccgccgaa tcccaatgcc ctatcgtgac ctgagcacgt
     2581 ctggcctctc cgcgcgcacg cccgaaattc ggcccaccaa ataccacgat tggccccatg
     2641 atgctcctcg aaagcttgcc gaacgctcaa gttgcatgga tgttgccgag gtattgggcg
     2701 aatagctgcg acatttagat cacacaagga aaattttttc tgaatatctg aggttgtgtg
     2761 gtgctattgt accgcacctc gcgttgcatt gtaaatgtcg catcgacttc gttttagcgt
     2821 catgtcactg tttcgtcgtc aggctgcaat ctgacgtcag gctgcggtct gacgtcaggc
     2881 tgcggtctga cgtcaggctg caatctgacg ttaaggagat ccgatacatg gctacatcga
     2941 cgcagctcgc agaactcgaa caacggcacc ggatgcttga agacgaacta gccgaagctc
     3001 ttcagcatcc ttccacggac gattgcaaat tgagtgaact gaagcgtcgc aaactgcaag
     3061 ttaaggatca aatagcgcgg ttgaaccgga gcgttcactg attcggaacg ttctccgatc
     3121 ggcaatctgt ttcttggaac cgccggccct cgacagcgag gccggcggtt gtgttt
//
LOCUS       DATILV010000683         3482 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_934025, whole genome shotgun sequence.
ACCESSION   DATILV010000683 DATILV010000000
VERSION     DATILV010000683.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3482)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3482)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3482
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_934025"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..778)
                     /locus_tag="VLJ17_16130"
     CDS             complement(<1..778)
                     /locus_tag="VLJ17_16130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV24542.1"
                     /translation="MPSADASLAHGAALWPLFVKELREITCGRALWTLLLLACPLIGY
                     SFFQAISLYGEASAAAANSRVLATSLSPLDGILVPTFGSLYVAVTLLFPFVAIRVLGE
                     EKQSGALRLLVQLPYSTVTLIGVKLAAMCCAWLLCAIPVLSSVLIWWIGGGHLSSAET
                     LTLLLGHLLYGVLIGAVALFAASITESSATAAILTLAFTIESWVLDFTIAGRPGWLEW
                     FAHLSLTQVIRTFEQGLLSMGLVAGVAVAICGFSALATVWL"
     gene            complement(765..1535)
                     /locus_tag="VLJ17_16135"
     CDS             complement(765..1535)
                     /locus_tag="VLJ17_16135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV24543.1"
                     /translation="MSVSAFDFCGFRQLLVRGAGKGLIVLQIASFTKSYGEQLALEGV
                     GFSVLAGEILGLIGPNGAGKTTLLEAIAGLLPVDSGEIRFGDLPLPAHRRREVIFYLP
                     DGVRPYTDQTTEQVLAFFAGVYRRSADEVSEIVSTVGLRPVLAKRIHALSKGYNRRLI
                     IALGFLTRHPILLMDEPFDGFDLRQSRDMMGVLRRMALGGATLVLSIHQLRDAEQVCD
                     RFALLADGRIRGVGTLEELRGQVNRPGGNLEDIFLALS"
     gene            complement(1598..2476)
                     /locus_tag="VLJ17_16140"
     CDS             complement(1598..2476)
                     /locus_tag="VLJ17_16140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018315790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1259 domain-containing protein"
                     /protein_id="HSV24544.1"
                     /translation="MFRTLAACGAVVSTVAAADAQSIDWAKIDGILGRTGAVGGAVHR
                     YGFPRSDLQVTLDGVTIRPTLALGGWIAFQPMGNTAMVMGDLVLLQSEVNPVMAKLIE
                     GGVDVTAVHNHLLRAEPLTFYMHVGGHGDPVKMAETIKEALAVSKTPLTAAPAGQPPA
                     IDLDTAQIDQILGGKGNNNGGVYAVNIPRRDPITEQSMPVGAPIMGGATAINFQPTGG
                     GKAAITGDYALIGSEVPDVVRTLRANGIEVTAIHSHMLTEEPRIIFLHFWANDDALKL
                     AKGLRAALDKTASAKS"
     gene            complement(2647..>3482)
                     /locus_tag="VLJ17_16145"
     CDS             complement(2647..>3482)
                     /locus_tag="VLJ17_16145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24545.1"
                     /translation="RRLKSFYFKGSYSVRPTCGSSNIRPASSLTYAIVGGLVLVAGST
                     ASFAYRPFDGTDAAVADPHEVEIELEPAGVLRQNAQTSLIAPFIIFNYGFAKNWEFVF
                     QGQGQSPLTSFDESASINGVGAFLKHVLREGSLQDATGPSVAIEFGPLLPGVNADSGF
                     GASFGTIVSQRWDWGAVHANVVTELTRDQHFDYFVGSIIEGPSKWKVRPVAEFFYEEE
                     IGQTRTVSGLIGAIWQVKDNLSFDVAYRHAVTNGRPVEEFRAGVTFGFSIPEFKGRRG
                     A"
BASE COUNT          736 a         1072 c         1045 g          629 t
ORIGIN      
        1 gcagccacac ggttgccagg gcggaaaagc cacagatggc gacggccacg ccggcgacga
       61 gacccatgga aagaagcccc tgctcaaacg tgcgaatgac ctgggtcaga gagaggtggg
      121 cgaaccattc gagccacccg gggcggcccg ctatggtgaa atccagcacc cacgactcaa
      181 tggtgaaggc caaggtcagg atcgccgcgg tcgcgctgct ctcggtgatc gacgccgcaa
      241 agagggctac tgcaccgatg agtacaccgt agagcaggtg tcccaacagc agcgtcaagg
      301 tctcagcgga agagagatgt ccgccgccga tccaccagat gagcaccgat gagagcaccg
      361 ggatggcgca caacagccag gcgcaacaca tggcggcgag cttgacgccg attagcgtaa
      421 cggtgctgta cggtagctgg accaggagcc gcaacgcgcc agactgcttc tcttcgccaa
      481 gcacccgaat ggcgacgaac ggaaagagaa gtgtgacggc aacgtataat gagccgaagg
      541 tggggaccag gattccgtcc aagggggaaa gactcgtggc aagtacccgc gagttcgccg
      601 ccgcggcact tgcctccccg tacagcgaaa tcgcttggaa aaagctgtaa ccgatgagcg
      661 ggcacgcgag cagcaacagc gtccataggg cgcgaccgca ggttatctcg cgcagctcct
      721 tcacgaacag gggccaaagc gcagctccgt gcgccagcga tgcatcagct gagggcaagg
      781 aagatgtcct ccagattccc gccagggcgg ttgacctgac cacgcaactc ttcgagcgtg
      841 ccaacgcctc ggatgcggcc atctgccagc agggcgaaac ggtcgcagac ctgctctgca
      901 tctcgaagtt gatggatcga taagaccagc gtagcgccgc ctaatgccat gcgccgcaac
      961 acacccatca tgtcgcggct ttgtctgagg tcgaagccgt caaacggctc gtccatcaga
     1021 aggatggggt gtcgcgttag aaatccgagc gcgataatca agcgccggtt atagcccttg
     1081 gacagggcgt gaatgcgctt cgccaggacc gggcggaggc caacggttga aacgatttca
     1141 gaaacctcat ccgccgaacg ccggtagacg ccggcaaaga aggctagcac ctgttctgtg
     1201 gtctgatcgg tgtaggggcg gacaccatcc ggcagataga agatcacttc gcgccggcgg
     1261 tgcgccggta gaggcagatc gccgaaacga atttctccgg agtcgacggg gagtaatccg
     1321 gcaatcgctt cgagcaaggt cgttttgccc gcgccgtttg gaccgatcag gccgaggatt
     1381 tcgccagcca agaccgagaa gccgacgcct tcaagcgcca actgttcgcc gtaagacttg
     1441 gtaaatgaag cgatctgcag cacgatcaag cctttcccgg cacctcgaac gagcaactga
     1501 cgaaagccgc aaaagtcaaa tgcactgacg ctcatgcgac ggtcacgccg gaccgaaggg
     1561 gcaccgcctc ggacggtgca ccttcgaatt cacccggtca gcttttcgcg ctcgccgtct
     1621 tgtcgagggc ggcgcgcagg cccttggcaa gcttcagggc gtcgtcattg gcccagaagt
     1681 gaaggaagat gattctcggc tcctccgtca gcatgtggct gtggatcgcc gtcacctcga
     1741 tgccgttggc gcgaagcgtg cgaaccacgt cggggacttc cgagccaatg agcgcatagt
     1801 cgcccgtgat ggccgctttg ccgccgccag tcggctggaa attgatggcg gtggcaccac
     1861 ccatgatcgg agcgcccacc ggcatgcttt gttcggtgat cgggtcgcgg cgtggaatat
     1921 tgaccgcgta gaccccgcca ttgttgttac ccttaccccc gaggatctgg tcgatctgag
     1981 cggtatcgag gtcgatcgcg ggtggctgcc cagccggtgc cgccgtgagg ggcgtcttgc
     2041 ttaccgccaa cgcttccttg atggtctcgg ccatcttgac cggatcgcca tgtccgccaa
     2101 catgcatgta gaacgtcaat ggctctgcgc gcagcaggtg attgtgaacc gcagtgacgt
     2161 ccacgcctcc ttcgatcagc ttggccatga ccgggttgac ttcgctctgc agcagcacaa
     2221 ggtcacccat gaccattgct gtgtttccca tcggctggaa tgcgatccag ccgccgagcg
     2281 cgagcgttgg ccggatggtc acgccgtcga gcgtcacttg caggtcggat cgaggaaacc
     2341 cgtagcggtg aacagcgccg ccgacggcgc cggtcctgcc gagaatgccg tcgatcttgg
     2401 cccagtcgat gctttgcgca tcggcagcgg caaccgttga caccacggca ccgcatgctg
     2461 cgagagtccg gaacatacct ttcataacaa tcctccatgg ctgggctcgc ttgcccggtt
     2521 gcttgacttc gctcttgaag cgggttgacg cgcagcggcg aatggcctcc ttttcatttg
     2581 gccgatcact cgtggaccac ggcgctttgt tgacgatact caacaaacta cgcacacgca
     2641 ggttccttac gctccgcgtc tccccttgaa ttccggaatt gagaaaccga acgtcacgcc
     2701 ggcgcgaaac tcctcgaccg gtcgcccatt cgtcaccgca tggcggtagg ccacatcgaa
     2761 gctgagattg tccttgacct gccagatggc gccgatcaaa ccggagacgg tgcgcgtttg
     2821 cccgatttcc tcctcgtaga agaattcggc gaccggccgt accttccact tcgaggggcc
     2881 ttcgatgatg ctgccaacaa agtaatcgaa gtgctggtca cgcgtaagct cggtaacgac
     2941 gttggcgtgg accgctcccc agtcccagcg ctgggacacg attgtgccaa agctcgcgcc
     3001 gaagccgcta tccgcattga cgcccggcag cagcggcccg aattcgatcg caacgctcgg
     3061 cccagtcgcg tcctgcaggc tgccttccct caatacatgc ttgagaaatg ccccgacacc
     3121 attgatgctc gcactctcat cgaaacttgt cagcggggac tgcccctggc cttgaaacac
     3181 aaattcccag ttctttgcga agccgtagtt gaagattatg aagggcgcga tcaacgacgt
     3241 ctgcgcattt tggcgtagta cgccggccgg ttccagctcg atttccacct catgcggatc
     3301 ggcaaccgcc gcatcggtgc cgtcgaacgg ccgatatgca aatgaggccg tggagccagc
     3361 taccagcacc agtccgccga cgattgcgta agttagcgat gatgcaggcc gaatgttcga
     3421 acttccgcac gtcggtcgca ctgaatagct ccccttgaaa tagaaagact taaggcgccg
     3481 ga
//
LOCUS       DATILV010000684        12665 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4764270, whole genome shotgun sequence.
ACCESSION   DATILV010000684 DATILV010000000
VERSION     DATILV010000684.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 12665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12665
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4764270"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..326)
                     /locus_tag="VLJ17_16150"
     CDS             complement(<1..326)
                     /locus_tag="VLJ17_16150"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HSV24546.1"
                     /translation="MNAIADKSTPSTIATHYIDGAFVESHGREVMDIISPTSGQTIGR
                     VTLADEEDTRRAIAAARRAFATYGRSTKEERLEILRRLHATTSARADDLTAAMVEEYG
                     GVVQFAG"
     gene            509..1420
                     /locus_tag="VLJ17_16155"
     CDS             509..1420
                     /locus_tag="VLJ17_16155"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HSV24547.1"
                     /translation="MELRHLRYFLAVGEDQHYGRASRRLGVAQPALSRQIQDLEKEIG
                     FKLFDRMPRGVKLSAAGELFMADARRILQEVGEATARAGRVARGQSGTLRVGFAENAS
                     WRGVAPDSFRRFREQQPDADLQLQPASSLEQLDALRSGRLDAGFVNFMPKADPDLDQL
                     IVGRQHVELAAPKRHPVTRLKKLRLRDLTDVPFIWFPRRASPALYDRLMGECYRGGLN
                     SPRIVQEGLNEATILSLVSAGLGVGWVLGSARWRTPQTVAILPVVDLNIPVLLALAWR
                     RDNTSPLLARFIDEVGRMPEVRAVNKG"
     gene            complement(1693..2520)
                     /locus_tag="VLJ17_16160"
     CDS             complement(1693..2520)
                     /locus_tag="VLJ17_16160"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV24548.1"
                     /translation="MLIIDSQVHVWPTHRPDRPLDAAGLDRTPYSYHELLAAMDVAGV
                     DQAILVPPSFDKDRNDYVIEATQKHPDRFAIMGRVSLQGGEGRKLLAGWKDQPGMLGV
                     RLTFHRDVDRPWIDDGTADWFWGEAEDNRIPVMVHAPERLAVVGEIAARHPSLRIIVD
                     HIGFARATMDDKAGAGAERMIALAGHPNVYVKVSALPCFSTEPYPFRNLREPLRRVIA
                     AFGPQRAFWGSDITRVPPSCSYRQTVTHFIEELDFLSAHDLEWIMGRGLAECLGWTR"
     gene            complement(2609..3739)
                     /locus_tag="VLJ17_16165"
     CDS             complement(2609..3739)
                     /locus_tag="VLJ17_16165"
                     /inference="COORDINATES: protein motif:HMM:NF040043.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6282 family protein"
                     /protein_id="HSV24549.1"
                     /translation="MKRFKNKSRAFGLLRIAALAIPACVLVTGTTRAQDASQAPTAAA
                     ALDDWKIDPLRGPVDLGLSDSALVGAIDVHVHLDPDAPGAGGVIRALDVFDAVAMAKA
                     RGMRGFVYKTHQDAGSAGAAYLVRKHAPGLEVFGRMASNYATGGVNVAALEHYTQIKG
                     GWGRIYEMPTRDSITATTRPGSMEPANLERLRPWMLMMPEGTPPYIAVSKNGELLPEV
                     KHLIGVLAKIRTVDSNGRMVLATGHATPEEHLLLAREGRRQGLNVLLTHPGDIAQLPE
                     AAKLGAFIEVTASNIYKNEAGRTAAAALIRKIGAESIIISTDCGQTGNVYPTDCLALA
                     ARGLRAHGITQRELDLMYKTNPAKLLGLPPLEAAAVSSKAGP"
     gene            complement(4013..5563)
                     /locus_tag="VLJ17_16170"
     CDS             complement(4013..5563)
                     /locus_tag="VLJ17_16170"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HSV24550.1"
                     /translation="MVRVSAVFIAACMVLICGSFGAVLYLTFGLSAIEALVAAVAALT
                     GFAICTITAKVAGPRGSSHDQIVGLSRGVVDLARQVAELGRRVAVMEEKVEGAVERAA
                     AVEPFTAEIGEIGVLIKQLAETVTAHESVLQNVKALPPVGASPAMPAAPAPDPGAGAA
                     AAHQSPPSPTVHNTATMRPRDSSPVPAASEVDMGRPAVSVHNTASVQNAGLGFKGLTI
                     EAAKGVIREAIDANRIEFFLQPILTLPQRKVRFYEALARLRTADGELIAASDFVDIAE
                     AGGLMARIDNLMLLRCVQVARRLMSRNRDVGLFCNLSASTLVDAEFFPQLTEFMEANR
                     TIAPALVLELTQAAYRTMGPLESESLLALMGRGFRFSMDHVGDLKFEPRDLADRGFRF
                     VKVPATLLLNRHNVRAADIHVADLTGLLMRFGIELIAEKIESEGTVVDLLDYEVKLGQ
                     GYLFSPPRPVRAELLQPMAPGTAEERPPPRKTVGAGVAPSPKVTDPRPALHRPTALAQ
                     IARAVARR"
     gene            5849..7339
                     /locus_tag="VLJ17_16175"
     CDS             5849..7339
                     /locus_tag="VLJ17_16175"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HSV24551.1"
                     /translation="MLLSVMDKRPWAGFLLFAAVHAAVWTILPFALYPNLPLDIIEAL
                     TYGREWQLGYDKLPPLPWWLVEIAYHTFDSDFAYYGLAQLSVLAAFAAVWAVMLRIAT
                     PAAAVAAILIIDGLHFFNFTAPKFNHDVVQLPFWALAGWAFHGALRTGRLGHWAVLGV
                     ALGLAFWAKYFVVILGLPLALFMLIDARARRCLATPGPYLAAAISLVIILPHLMWLHQ
                     NHWLPLNYASSRAKATDGLLGHFTHPALFALAQLFWLLPGIFIALPLLRRPYEGDATA
                     ADDYDRRILAVLAFGPAVTVIAASAISGRGLVTMWGYPLWLFLGPWIVVSVSSRIDRT
                     SLTRIAGVWGAVTAIYALTFVAQYAVLPHFDHRYRAVLFPGERLAQEISARFHAQTGA
                     PLGYVVGTMWLGGNIGHYSTDHPRTLIDGDPRRAPWIALDDLAVKGGVAVWTAGDLQT
                     LPHPYVAVAGNAAVQRPLTIPMRRGNGEVTIGWGIIAPMPKAAMGM"
     gene            complement(7498..8844)
                     /locus_tag="VLJ17_16180"
     CDS             complement(7498..8844)
                     /locus_tag="VLJ17_16180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HSV24552.1"
                     /translation="MSRAQARLSPEARPNDLEAYWMAFTPNRAFKKAPRLITRAKDMH
                     YYAADGRAVLDATAGLWCCNAGHNRDPIVAAIKRQAEELDYVPAFQFAHPQAFELASR
                     VAALAPGDLDHVFFCNSGSEAVDTALKIVLAYHNLRGSGARTRLIGRERGYHGVGFGG
                     ISVGGIVNNRKFFGSLLTGVDHLPHTYNREQQAFTKGEPEWGAHLADELERIVALHDP
                     STIAAVIVEPMAGSTGVLPSPKGYLQRLRAICDKHGILLIFDEVITGFGRLGFAFAAE
                     RYDVVPDIITFAKGITSGTVPMGGAIVRAPIYNAFMHGPEHVIELFHGYTYSAHPLAC
                     AAGLATLDLYRAEKLFERARALEPKFADAAMTLRGLPGVLDIRTVGLVAGIDLASKPD
                     GVGKHAYAAMEQAFHEEGVMIRVTGDTIAVSPPLIASEDQIGEMFAKIGKAIQAVR"
     gene            9518..11122
                     /gene="hisS"
                     /locus_tag="VLJ17_16185"
     CDS             9518..11122
                     /gene="hisS"
                     /locus_tag="VLJ17_16185"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004821 - histidine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006427 - histidyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HSV24553.1"
                     /translation="MAEPKSTKLKARLPRGLVDRAPAEIAATRRMMETIRKVYELYGF
                     EPVETPAIEYTDALGKFLPDQDRPNEGVFSFMDDDEQWLSLRYDLTAPLARYVAENFD
                     TLPKPYRSYRAGYVYRNEKPGPGRFRQFMQFDADTVGSASMAADAEICMMAADTMEAL
                     GIPRGGYVVKVNNRKVLDGVMEAIGLGGEENAGKRLTVLRAIDKYDRLGSTGVEALLG
                     AGRKDESGDFTRGAGLNPKQTKRIMVFVALQSGITLLSDVTDRTQSEAEQDEVLHTFQ
                     PVDDDIVFHAESNAATIQQLRAHFGNNPTSLQGIDELNHINTLCQAAGYGRDRIRIDP
                     SVVRGLEYYTGPVYEVELTFSTDSTSGSPRFGSVGGGGRYDGLVSRFRGELVPATGFS
                     IGVSRLLAALTHLGKIDAKPEPGPVIVTVLDRDRLADYQRMAATLRQAGIPAELYLGS
                     GKFGPQMKYADRRRSPCVVIQGSDEKAKGEVQIKDLIVGAELAGLSKEREDYLRKQAE
                     AQFAVQEDRLVDAVRDVLARHNPRMG"
     gene            complement(11667..12461)
                     /locus_tag="VLJ17_16190"
     CDS             complement(11667..12461)
                     /locus_tag="VLJ17_16190"
                     /inference="COORDINATES: protein motif:HMM:NF013882.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HSV24554.1"
                     /translation="MLARDDIAGFLINLDRSPDRLRASARQLDDLGLSWSRVSAFDGQ
                     VADPALWSGIDRGRFESNVGRPITGSEIALHLSHGAAMRAFDQSSARFGVIFEDDLFI
                     DDIPAFRDVVMALMRHCDAWDIVKLSGVHRNPLPVPLLRLHEKYMLAAPLLKTTSAVA
                     YMMNHRAAKVVLASLEPIDDHFDHRFDQPWRYALRYRVVTPFPVREQPTTPSTLDYSK
                     RAAKFALFRRRKALYYRMSIGLQRLAYNARHGFFVFGLLEIARRIG"
BASE COUNT         2294 a         3878 c         4000 g         2493 t
ORIGIN      
        1 ccggcgaact gcacgacacc gccgtattct tccaccatgg cggccgtcag atcatcggcg
       61 cgcgccgaag tggtcgcatg cagccggcgc aatatctcca gtcgttcttc cttcgtcgac
      121 cggccgtaag tcgcgaaggc gcgcctggcc gcggcgattg cgcggcgcgt gtcctcttcg
      181 tcggccagcg tgacgcggcc gatcgtttgg ccgcttgtcg ggctgatgat gtccatgact
      241 tcgcggccat gggattcgac gaacgcgccg tcgatgtagt gcgtcgcgat ggttgaaggt
      301 gtgcttttgt ccgcaatcgc gttcatcgag gctctccttg gatgagaatt catcatcgga
      361 gcgaagctgc gatgacgtgc gccggcgcgc ccgtgtttaa gcgctgcgta accgtcattc
      421 gcccctgcgc agcgttacag tctgcgcagg aggcaccgat gcgtccaaga tatctttact
      481 atcgaaccga tatggataaa gtatcggtat ggagttgcgg cacctgagat atttcctggc
      541 ggtcggtgag gaccagcatt acgggcgcgc gtcgcgtcga ttgggcgtgg cgcagccggc
      601 gctttcccgc cagattcagg atttggagaa agaaatcggc ttcaagcttt tcgatcgcat
      661 gccgcgcggc gtgaagttga gtgccgccgg tgagctgttc atggcggatg caaggcgcat
      721 cctgcaagag gtcggcgaag cgacggcacg cgccgggcgc gtcgcgcgtg gccagtcagg
      781 gacgctgcgc gttggcttcg ccgagaatgc gtcctggcgc ggcgttgctc cggattcctt
      841 ccggcgattt cgggagcagc aacccgacgc cgatttgcaa cttcagccgg cgtcgagtct
      901 ggaacaattg gacgctctac gatccggccg actggatgca gggttcgtca atttcatgcc
      961 aaaggccgat ccggatttgg accaacttat cgttggcaga cagcatgtcg agctggctgc
     1021 gcccaagagg catcctgtca cacgactgaa gaaacttcgc ctgcgcgacc ttacagatgt
     1081 gccgtttatc tggtttccga ggcgggcgag cccggccctc tacgaccgac tgatgggtga
     1141 atgttatcgt ggggggttga actccccccg catcgttcag gagggattaa acgaggcgac
     1201 aatcttgagc ctcgtgtcgg ccggcttagg cgtcggatgg gttcttggaa gcgcacgttg
     1261 gcgcactccc caaaccgttg ccatcttgcc cgtcgtcgac ttgaacattc ccgtcttgct
     1321 cgctctggcg tggagacggg acaatacctc tcccttgctg gcacggttca ttgatgaggt
     1381 agggcgcatg ccagaggtgc gagccgtcaa taaaggctga ggggcttgct gacctggatt
     1441 gatttggctc aaaaagggct tgcgtaccga attcgccgtg acgagaaaag aagacttcgg
     1501 acttcagcat tatggctcca atgccggaga gatgatgttt cggctttgac tttttgaaaa
     1561 gtctgatgct cgttccggga caagcagtgc ttggacctcc ggcttgagcg agttgtggcc
     1621 ggtcgccgcc gatcggcact gcgctgggtc taatattagc tgttcccgaa tgtcgcttcc
     1681 gctccatccg cgctaccgcg tccaccccag gcactccgcc agcccgcgcc ccatgatcca
     1741 ctcgagatca tgggccgaga gaaaatccag ctcctcgatg aaatgcgtca ccgtctgccg
     1801 atagctgcat gacggcggaa cgcgggtgat gtcgctgccc cagaacgcgc gttgcggccc
     1861 gaacgccgcg atcacgcggc gcaacggctc gcgcaggttc cggaacgggt agggctccgt
     1921 ggaaaagcac ggcagcgccg acactttcac gtagacattc ggatgcccgg caagtgcgat
     1981 catgcgttcg gcgcccgcac cggctttgtc gtccatggtg gcgcgggcaa agcctatgtg
     2041 atcgacgatg atgcgcaacg acggatgccg cgccgcgatc tcgcccacga ctgccagccg
     2101 ctctggcgca tgtaccatca cgggaatgcg attgtcctcg gcttcgcccc agaaccagtc
     2161 ggcagtgccg tcgtcgatcc atggtcggtc gacgtcgcga tggaaggtga ggcgcacgcc
     2221 cagcatgccg ggctgatctt tccatcccgc gagcaatttg cggccttcgc cgccttgcaa
     2281 ggatacgcgt cccatgatgg caaagcggtc cgggtgcttc tgcgttgcct caatgacgta
     2341 gtcgttgcga tccttatcaa acgacggcgg caccaggatc gcctgatcga caccggcgac
     2401 gtccatggcg gcgaggagtt cgtggtaact gtaaggcgtg cggtcgaggc cggccgcgtc
     2461 gagcggccgg tcaggccggt gggtcggcca gacgtggacc tgggagtcga tgattagcat
     2521 gatgtgtgtg tcgtctcatt ccgccttgtt tcgcaccgta ttgatcggtc cgccgttgaa
     2581 gatcacgcca ccagactggc ccgaatagtc acggccccgc cttgctcgac actgccgccg
     2641 cctccagcgg cggcaggccc agcaattttg ccggattggt cttgtacatc agatcaagct
     2701 cgcgctgcgt aatgccatga gcgcgcaggc cgcgagcggc gagcgccagg cagtcggtgg
     2761 ggtagacgtt tccggtctgg ccgcaatcgg tcgagatgat gatggattcg gcgccgatct
     2821 tgcggatcaa ggccgctgcc gccgtgcgtc cggcttcatt cttgtagata ttcgaggcgg
     2881 taacctcgat gaaggctccg agtttggccg cctccggcaa ctgcgcaata tcgcccggat
     2941 gggtcaagag aacgttcagg ccttgccggc gtccctcgcg ggccagcagc agatgttcct
     3001 cgggggtcgc gtggccggtc gccagcacca tgcggccgtt gctgtccacg gtcctgatct
     3061 tggcgagcac gccgatcagg tgcttcactt cgggcagcag ctcgccgttc ttcgacaccg
     3121 cgatgtaggg cggggtgcct tccggcatca tcagcatcca gggccgcagc cgctccagat
     3181 tcgcaggctc catgctgccc ggccgagtgg ttgcggtgat cgagtcgcgg gtcggcatct
     3241 cgtagatgcg gccccagccg cccttgatct gggtgtaatg ctccagcgcc gccacattga
     3301 cgccgccggt ggcgtagttc gacgccatgc ggccgaacac ctccaggccc ggcgcgtgct
     3361 tgcgcacgag gtacgcggcg cccgcggagc cggcgtcctg atgggtcttg taaacgaagc
     3421 cgcgcatgcc gcgggccttc gccatggcga cggcatcgaa aacgtcgagc gcccggatca
     3481 ccccgccggc cccgggcgca tccggatcga gatgcacgtg gacgtcgatg gcgcccacca
     3541 gcgccgaatc gctaaggccg agatcgaccg gcccgcgcaa cggatcgatc ttccaatcgt
     3601 cgagcgcggc ggctgcggtt ggcgcctggc tggcgtcctg cgcgcgggta gtgccggtga
     3661 cgagaacgca ggccggaatc gccaacgctg cgatccgcaa tagtccgaac gcacgcgatt
     3721 tgtttttgaa gcgcttcatc acgatcctcc ctggtgtttc ggctttgtgc agaaggtcaa
     3781 ttctagagga cgatcaagtc atgttaagcc actttttccg agtcatggct tgtcccgcgc
     3841 cttgcttggt aagccgggta aagacgtgga tgcccgcgag gtccccgccg ggtgaggcgg
     3901 cggggcgtct ctgcgcgggc atgacgagag gttattcgat cttcatgtcg cggtaggtcg
     3961 tcggacgtcg agcggaccga cagttgatta ccgatccctg actatcggct acctagcggc
     4021 gcgccacggc gcgggcgatc tgggcaagcg cagtcgggcg gtgcaacgcg gggcgcgggt
     4081 cggtgacctt cgggctgggc gcgacgccgg cccccacggt tttccgcggc ggtggccgct
     4141 cctcagccgt gccaggagcc atcggttgca gcagctcggc gcgaactggt cgcggtggcg
     4201 aaaacaggta gccttggccg agcttcacct cgtagtcgag cagatcgacg accgtcccct
     4261 cgctctcgat cttctcggca atcaactcga tgccgaatcg catcagcagg cccgtcaggt
     4321 cggcgacatg aatatcggcg gcgcgcacat tgtgacgatt gaggagaagc gtcgcgggca
     4381 ctttgacgaa acggaagccg cgatcagcga ggtcgcgcgg ctcgaatttc aggtccccca
     4441 cgtggtccat ggaaaagcgg aagccccgac ccattaatgc cagaaggctc tcgctttcga
     4501 gcggccccat tgttcggtac gccgcctggg taagttcgag caccaatgcc ggcgcgatgg
     4561 tgcgattcgc ttccatgaac tcggtgagct gcgggaagaa ttcggcgtcc accagcgtcg
     4621 atgcggagag attgcaaaac agccccacgt cgcgattcct ggacataagc cgccgtgcca
     4681 cttggacgca gcgcaacagc atcagattgt cgatccgggc catcagccca ccggcttccg
     4741 ctatatcgac gaagtcgctc gcggcaatga gctcgccgtc ggcggtgcgc agccgcgcca
     4801 acgcttcgta gaaacgcacc ttgcgctgcg gcagggtgag gatcggctgt aagaagaact
     4861 cgatccgatt tgcatcgatg gcttcgcgga tgaccccttt ggccgcctcg atggtgagac
     4921 ccttgaaacc caaaccggcg ttctggacgc ttgcggtgtt gtggacgctc accgcaggtc
     4981 ggcccatatc gacctcgctc gcagccggca cgggactgga gtcgcgcggc ctcatcgtcg
     5041 ccgtgttgtg cacggtagga gacggcggac tctgatgtgc cgccgctgcg cccgcgcccg
     5101 gatcaggcgc tggtgcggcc ggcatggccg gggaggcgcc gacgggcggc aaagccttga
     5161 cgttttgcag cactgattca tgggcggtga cggtttccgc aagttgctta atcaggacac
     5221 cgatctcgcc gatctccgcc gtgaacggct cgacggcagc agcccgttca accgctccct
     5281 caaccttttc ttccatgacg gcgacccggc gacccaactc ggccacctgg cgcgcgagat
     5341 cgacgacccc gcgcgatagt ccgacgatct gatcgtgcga tgatccacgc gggcctgcga
     5401 ctttcgccgt gatggtgcag atcgcgaagc cagtcaacgc cgcaacggct gccacgaggg
     5461 cctcgatcgc ggacagaccg aacgtcagat ataacactgc gccaaacgag ccgcagatca
     5521 gcaccatgca ggctgcgatg aaaaccgcgc tcacgcggac catgcgctcc cccgtttgat
     5581 aagacgggcc gatcgacgca aagacaactg attcgccccc tcgcgctaca gtgtttacaa
     5641 gcggcgccaa gggcaagcga tcctgactgt ttctcaccac gatagcgttg acgccttgac
     5701 gccaagggcc catggtggag tcggactggg tggtgggaca cccgggaagt gccggaaagg
     5761 gtcgtcgggg gacgcccatt tcagtaatcg gtcttacatg gtggatggtc tttcttctgc
     5821 ccggcagccg gcgcctggcc tcgtccctat gctgctttcc gtcatggaca agcggccgtg
     5881 ggcgggcttc ttgctgttcg cggcggtgca cgccgccgtc tggacgatcc ttcctttcgc
     5941 cctctacccc aacctgccgc tagacattat cgaggccctg acttacgggc gcgaatggca
     6001 acttggctac gacaaattgc cgcctctgcc atggtggctc gtcgagatcg cctatcacac
     6061 cttcgattcc gactttgcct attatggcct cgcgcaactc agcgtgctgg cggcgtttgc
     6121 ggccgtatgg gccgtcatgc ttcggatcgc aactccggcc gcggcggtcg ctgccattct
     6181 gatcatcgac ggattgcatt tcttcaattt caccgcaccg aaattcaatc acgacgtggt
     6241 ccagctgccg ttctgggcac tggccggatg ggcgttccac ggcgcactgc gcaccggacg
     6301 cctcggccat tgggcggtgc tgggcgtcgc cctcggcctc gcattctggg cgaagtattt
     6361 cgtggtcatt ctcggattgc cgctcgcgct tttcatgttg atcgatgcgc gggctcgtcg
     6421 ttgcctcgcc acccccgggc cgtatctcgc tgccgcgatc agcttggtga tcatcttacc
     6481 gcatctgatg tggctgcacc aaaaccactg gctgccgctc aactatgcgt cgtcccgcgc
     6541 caaggcgacc gacgggttgc tcggtcactt cacccatccg gcgcttttcg ccttggcaca
     6601 gttgttctgg ctgctgcccg gcatcttcat cgcgctgccg ctgttgcggc ggccttatga
     6661 gggcgatgcc acagcggccg acgattacga tcggcgcatc ctcgccgtcc tcgccttcgg
     6721 gccggccgta acggtgattg cggcgtcggc catcagcggg cgtgggctgg tgacgatgtg
     6781 gggttatccg ctatggcttt tcctcggacc atggatcgtg gtgtcggtgt cgtcgcggat
     6841 cgatcgcacc tccctcacac ggattgccgg cgtgtggggt gccgtgacgg cgatctatgc
     6901 cctgacgttc gtggcccaat acgcggtgtt gccgcatttc gatcaccgct atcgcgcggt
     6961 gctgtttccg ggcgagcggc tggcgcagga aatctccgcc cgttttcatg ctcagaccgg
     7021 tgcgccgctt gggtatgtgg tcggcaccat gtggttgggc ggaaacatcg gccactattc
     7081 caccgatcac ccacgcacgt tgatcgacgg cgatccgcga cgggcaccct ggatcgccct
     7141 tgacgacctc gccgtcaaag gcggcgtggc ggtttggacc gccggcgatc tccaaacgct
     7201 cccccacccc tatgtggcgg tggccggcaa cgccgcggtg caacggccgc tcacgatacc
     7261 gatgcggcgc ggcaacggcg aagtgacgat cgggtggggc atcattgcgc ccatgccgaa
     7321 ggccgcgatg gggatgtgag gcgctgatcg gtacgccttg tctgatcgcg ctgtccgggt
     7381 ggcggtgatc gcgctcgagc aatttgctga gtcgctgtca ccccaccctg tcttcggcag
     7441 caaagaaacc caattttacc ctccccctcc gggagaggta ttcaaatcgc gttgcgccta
     7501 ccgcaccgct tggatcgcct tgccgatctt tgcgaacatc tccccgatct ggtcctcgct
     7561 cgcgatcaag ggtgggctca ccgcaatggt gtcgccggtg acgcggatca tgacgccctc
     7621 ttcgtggaac gcctgctcca tcgccgcata ggcgtgcttg ccgacgccgt cgggcttgga
     7681 ggcgaggtcg ataccggcga cgaggccgac ggtgcggatg tcgagcacgc cgggcaggcc
     7741 gcgcaacgtc atggccgcgt cggcgaactt cggctccagg gcccgggcgc gctcgaacag
     7801 cttttcggcg cggtagagat cgagcgtcgc aagcccggcc gcgcaggcga gcggatgggc
     7861 cgaataggtg tagccatgga acagctcgat gacgtgctcg ggcccgtgca tgaaggcgtt
     7921 gtagatcgga gctcgcacaa tcgcgccgcc catgggcacg gtgccggagg tgatgccttt
     7981 agcgaaggtt atgatatccg gcaccacgtc gtagcgttct gccgcgaacg caaagccgag
     8041 ccgcccgaag ccggtgatca cctcatcgaa aatcagtagg atgccgtgtt tgtcgcagat
     8101 cgcccgcagc cgctgcagat agcccttcgg gctcggcagc acgccggtcg agcctgccat
     8161 cggctccacg atgacggccg cgatggtcga aggatcgtgc aaggccacaa tgcgttcgag
     8221 ttcgtctgcg aggtgggcgc cccattctgg ctcgcccttg gtgaaggcct gttgctcgcg
     8281 gttgtaggtg tgcggcagat gatcgacacc ggttagcagc gagccgaaga atttccggtt
     8341 gttgacgatg ccgccgaccg agatgccccc gaagccaacg ccgtgatagc cgcgctcgcg
     8401 gccgatcagg cgggtacgag caccgctgcc gcgcaggtta tgataggcaa gcacaatctt
     8461 gagggcggtg tcgaccgcct ccgagccgga attgcagaag aatacgtgat cgagatcgcc
     8521 gggcgccagc gccgcgacgc ggctcgccag ctcgaaggct tgcgggtgcg cgaactggaa
     8581 cgccggcaca tagtccagct cctcggcctg gcgtttgatc gccgccacga tggggtcgcg
     8641 gttgtggcct gcgttgcaac accacaggcc ggcggtggcg tcgagcacgg cgcggccgtc
     8701 ggccgcgtag tagtgcatgt ccttggcccg tgtgatcagc cgcggcgcct tcttgaaggc
     8761 gcggttcggt gtgaacgcca tccagtaagc ttcgagatca ttggggcgcg cttcaggcga
     8821 tagacgggct tgggctcggg acatgggggc tccggttggc gccgcgcggg cagcgcagtt
     8881 tctggtgggc tcaatctcat actgactcta ccggatcatt gcagttttaa taccacgtta
     8941 gattgaaaat aaaacattga acacgggata ctagtatgcg atttccaaag ttaggaatcg
     9001 ctcgatccta acggcacgcg aagtcaagcg cacctctgtt gtgaggcacg aaacaaggag
     9061 ctggtcgcag caatttcctc agaaaagaaa aaataacaga ggaattcctg gaaatttccc
     9121 acgatttcgg tctctcggcg gggttttgga agccggtcgc gaagtgaatt caatgacttg
     9181 gagcccttgg agccaatttc caatttccca atttcccgtt cctgcgagaa caggaaattt
     9241 ctttgtccga acaggagttc tctccgccca tatacgcgtc acgacctttg gttgctctgc
     9301 catccgccat attgttccac ataggcaccg cgcttttatt ctataggcct cttcctattt
     9361 gccaagcgaa ttcaacctcg ctgggtcgat cgagcgttcg gatcgagtaa aattcctgtt
     9421 tccaccaggt tcccgagcgg tgtctcgacg gttgccttgc cgctcgagaa agcggctgct
     9481 accaaccgcg ccgatcaacc ttaaccggaa tgccgcgatg gccgaaccca aaagcaccaa
     9541 gctcaaggcg cgtttgccgc gcgggctcgt ggaccgcgcg cccgccgaga tcgctgcgac
     9601 gcggcgaatg atggagacga tccgcaaggt ctacgagctt tacggcttcg agccggtgga
     9661 gaccccggca atcgaataca ccgatgcgct cggcaagttt ttgcccgacc aggaccggcc
     9721 caacgagggc gtgttctcgt ttatggacga cgacgagcaa tggctgtcgc tgcgctacga
     9781 cctcaccgcc ccgctcgccc gctatgtggc ggagaatttc gatacgctgc ccaagcccta
     9841 tcgcagctac cgggccggct acgtgtatcg taacgagaag cccgggccgg ggcggttccg
     9901 acagttcatg cagttcgatg ccgatacggt gggttcggcc tcgatggcgg ctgatgccga
     9961 gatttgcatg atggcggcgg ataccatgga ggcgctgggg attccgcgcg gtggttatgt
    10021 ggtgaaggtg aataaccgca aggtgctcga tggggtgatg gaggcgatcg ggctaggcgg
    10081 ggaggagaat gccgggaagc ggcttacggt gctgcgggcg atcgacaaat acgaccgatt
    10141 gggcagcacc ggagtcgaag ctcttctcgg tgctggcaga aaagatgaga gcggcgactt
    10201 tacaagaggt gcaggactaa atccgaaaca gaccaagcgg ataatggttt ttgtcgcgct
    10261 acagagcggc atcacacttt tgagcgatgt cactgatcgc acgcagtctg aggccgaaca
    10321 ggatgaggtt cttcacacat tccagcccgt tgacgacgac attgtgtttc acgcggaaag
    10381 caacgctgca accatccagc agcttcgtgc tcatttcgga aacaatccca cgtcgctgca
    10441 agggatagac gagctcaacc acatcaacac attatgccaa gcagcgggtt acggacgcga
    10501 ccgcatccgc atcgaccctt ccgtggtgcg tggcctcgaa tactatactg gcccggtcta
    10561 cgaggtggag ctgacattct ctaccgacag caccagcggt tccccgcgct tcggctccgt
    10621 cggcggcggc ggccgctatg acggcctcgt ttcgcgtttc cgcggcgagt tggtgccggc
    10681 gaccggcttt tccatcggag tgtcacggct gctcgcggcc ctcacgcatc tcggcaagat
    10741 cgatgcaaag cccgagcccg gcccggtcat cgtcacggtg ctcgatcgcg atcgcctcgc
    10801 cgactaccag cgcatggccg cgacgctgcg ccaggccggc atcccggctg agctttatct
    10861 tggctctggc aaattcggcc cccagatgaa atacgccgac cgccgtcgca gcccctgtgt
    10921 ggtcatccag ggctcggacg agaaggccaa gggcgaggtg cagatcaagg acttgattgt
    10981 tggcgccgag cttgcggggt tatcgaagga gcgcgaggat tatctgcgca agcaggccga
    11041 agcccagttc gcagtgcagg aggaccggct ggtcgatgcg gtgcgcgacg tgctggcgcg
    11101 gcataaccct aggatgggtt gagctcttgc gaaacgcatc ttgggcagca ccatacgaaa
    11161 cagccgtcga tgggtttcgc cgcgctcaac ccatcctaca tgctgtggcc gtatgaaacc
    11221 catcaccttt cgccgaagct tcccccgcgg ttcgcccagc cccatcctgc gaaaagacgc
    11281 tggcaggtac catgcgatga aacgtcgaga aacgtcgagt atggcccgca ccccgccgac
    11341 atgtccatgt ttcaccggat tgaagtgaat ctaatcgaca tggcgtgcga aatcgttttc
    11401 gtttcgcaag gtgtgttccc aatgtcggcg ctgccaatgc cacgctccgc tttgtggcgc
    11461 ggcttgcgga aatccgttcg tcgtggggca gcccgctgcg gcgatttcga atgaatgctg
    11521 tgtccctgca tagtcgaatg cggcgcgtag caaggctaat gttcgatcag caagattcac
    11581 ggcgaaaaaa aatagctgcc gccggcgacg aagttacgcc gatagttcgt catcgcgttt
    11641 aggccgttcg gatgggtttc gtaagctcaa ccgatcctac gcgctatctc aagaaggccg
    11701 aacacaaaga acccgtgccg tgcattgtag gcgaggcgtt gcaacccgat cgacatccga
    11761 taatagagcg ccttgcggcg ccgaaatagc gcgaatttcg cggcgcgctt ggaatagtcg
    11821 agcgtcgagg gagttgtggg ctgctcccgg accgggaacg gagtgacgac gcgataacgc
    11881 aacgcgtaac gccagggctg atcgaagcgg tgatcgaaat gatcgtcgat cggttccagc
    11941 gatgccaaga ccaccttcgc ggcgcggtgg ttcatcatat aggccacggc gctcgtcgtt
    12001 ttcagaagtg gcgccgccag catgtatttc tcgtgcaggc gcagcagcgg cactggcaac
    12061 gggttgcggt ggactcccga gagcttgacg atgtcccatg catcgcaatg gcgcatcagt
    12121 gccattacga catcgcgaaa cgccggaatg tcgtcgatga agaggtcatc ctcgaagatg
    12181 acgccgaagc gcgccgacga ttgatcaaac gcccgcatgg ccgctccatg actgagatgc
    12241 agagcgatct ccgagccggt gatcgggcgt cccacattgc tttcgaaccg accgcggtcg
    12301 atcccggacc agagcgcggg atcggccacc tgtccgtcga acgcggatac gcgggaccaa
    12361 ctgagcccga ggtcgtcaag ctgccgggcg gacgcccgca agcgatccgg cgaccggtcg
    12421 aggttgatga ggaatcccgc aatgtcatcg cgcgcgagca taggcggacc cctcgcccgg
    12481 aagccagagc atatgcccca acgcaatcac ggactattgg atcgcccgct ttcgcgcgtg
    12541 tgaggaaata gctatgcaac ttctttcagc ttgagcccga ttaacgggat cgaagccgca
    12601 cgttcctgta tctgcgcgag atcataattc atctgcatcc taaaccaggg gcggcggcgc
    12661 tgctt
//
LOCUS       DATILV010000685         4158 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3483932, whole genome shotgun sequence.
ACCESSION   DATILV010000685 DATILV010000000
VERSION     DATILV010000685.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4158
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3483932"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..668)
                     /locus_tag="VLJ17_16195"
     CDS             complement(<1..668)
                     /locus_tag="VLJ17_16195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24555.1"
                     /translation="MFKMPLLCSAALIASVAVGIAAEARTPESAFPNFMSTDFGWQPN
                     TGLDFRPVEAKIAPVGPDPSYSPGRGIERMSDADNPNLKPWAAAQMKMHNDLVRDGHR
                     AFSAQSRCWPGGGPAQLLFVAEPIYFIQTPQQVWIIWQRDHHVRRVYLNREHSENPTP
                     TWFGESVGHYENGELVIDTVGFVEHPYSFVDNYRTPHTKDLHVVERWKIVDGGNAIEA
                     TVTVA"
     gene            complement(827..2038)
                     /locus_tag="VLJ17_16200"
     CDS             complement(827..2038)
                     /locus_tag="VLJ17_16200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24556.1"
                     /translation="MFRTFIMPLLIAALMAGLFTMASDRRGFEELAVRAAVAGEARAR
                     DAKCPLSQVFADKADLGPLSVCLKYGLAAYEAAQRYPATSAKVFAVYGEDETFQRVLD
                     RYGHQVIPVVAYFVENGSREFQVRQALGEALQQMWEGKRPKWKLADITREQIGLIAIY
                     HLERRGHEMLAEFEIVGGVAKRKPVARFFLGAKDLLFGGVEDVETILVRGERLPTWKE
                     VGFAALDVTIVAGGVGAAAKAARLGVGAAETVEKSAVRVAAEGAAEKNAIRLAAAEGV
                     AESSAIRAAAGGAEKNAFRLAAEGAYEAISAVGKTAVVAAPIAFAYVAITRPQLIASA
                     GGWIAEQLGGNRLVGIFAVYLIGIFLILQFLRPLLWCGRIVGTPIFRLARYAYGRPTR
                     RLARSAPLDNG"
     gene            complement(2398..2739)
                     /locus_tag="VLJ17_16205"
     CDS             complement(2398..2739)
                     /locus_tag="VLJ17_16205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24557.1"
                     /translation="MVRNMILILATAVAVGGAALTPTVASAGWYGYGHRPDIRADRRD
                     LRADRFDIRRDRADLRGDFRDLRRDLRFGRLADASKDLADIRRDRRDLRLDRRDLRRD
                     RRDLFFDRYGY"
     gene            complement(2893..3117)
                     /locus_tag="VLJ17_16210"
     CDS             complement(2893..3117)
                     /locus_tag="VLJ17_16210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24558.1"
                     /translation="MRSEDLQGLLAEEVLDRRISTKPPSHLDPFVCHAAREFMHFLGQ
                     CTRDEKSGIQVVSAPAEGYGGLRMVFANAR"
     gene            3681..>4158
                     /locus_tag="VLJ17_16215"
     CDS             3681..>4158
                     /locus_tag="VLJ17_16215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HSV24559.1"
                     /translation="MKALVLRRHGGLTDLEVENDYPIPRTAEGHVVIRVRASSFNYHD
                     VFTMRGMPGIKVPLPVVLGLDIAGEIVEVGGGVLAWKPGDRVLVNPLNKKKGLMGEML
                     DGGMAEYCLVAADQLVAMPAHVTFAEAASLPVAYGTAHRMLITHDTIRKGERVMVLG"
BASE COUNT          849 a         1243 c         1252 g          814 t
ORIGIN      
        1 gcgacagtca cagttgcctc gatggcgttc ccgccgtcga caatcttcca gcgttccaca
       61 acgtgaaggt ccttggtgtg gggcgtgcgg taattgtcca caaagctata cggatgctcg
      121 acgaagccga cggtgtcgat aacaagctcg ccgttctcgt agtggccgac ggattccccg
      181 aaccaggtcg gggtcggatt ctcgctgtgc tcgcggttaa gatagacacg gcgcacatga
      241 tggtcgcgct gccagatgat ccagacctgt tgcggcgttt gaatgaaata gatgggctcg
      301 gcgacaaaaa gcaattgggc cggaccgcct ccgggccagc agcgggactg cgcgctgaag
      361 gcgcgatggc cgtcgcgcac caaatcgtta tgcattttca tttgcgccgc tgcccaaggc
      421 ttcagattgg ggttgtcggc atcggacatc cgctcgatgc ccctgcccgg cgaataactt
      481 gggtcaggcc cgacgggtgc gatcttcgcc tcgacaggcc ggaagtcgag gcccgtgttg
      541 ggctgccagc caaaatcggt agacataaag ttggggaagg cgctttccgg tgttctggct
      601 tctgccgcga tacccaccgc cactgaagca atcagcgccg cgctacacag caatggcatt
      661 ttgaacatcg catgctcctc tggtgttgga tcagaggtcc ggcttgtgga cgtcattagc
      721 gccccgtatc cgggaagatg caccagtgta tcacacggta ctcgcagcgc gaatgtcgcg
      781 ctcagtcggg cgcgacggtt tcgatgaagc gagcggtatg ctcgcactac ccattatcta
      841 atggtgcact gcgggccagg cgccttgtcg gccggccata ggcgtagcga gcgagacgaa
      901 aaatcggcgt gccgacaatc cgtccgcacc acaacagcgg ccgcaaaaat tgcaggatca
      961 gaaagatccc aatcaggtag acggcgaaga tcccaacaag gcgattgccg ccgagctgtt
     1021 cggcgatcca cccgcccgca gatgcaatga gttgcgggcg cgtgatagca acatatgcaa
     1081 acgcaatcgg agcagcgacc accgccgtct tgccgaccgc actgatggct tcgtatgcgc
     1141 cttccgcggc cagacgaaac gcgtttttct cggctccgcc tgcggctgca cgaatcgcgc
     1201 tactctcagc tacgccttct gccgcagcca gacgaatcgc gtttttctca gctgcgcctt
     1261 ctgcggccac gcgaaccgcg cttttctcaa cagtctctgc ggcgccgacc ccaaggcgag
     1321 ccgcctttgc ggccgcaccg actccgcccg ccacaatggt gacgtcgaga gcggcaaaac
     1381 cgacctcctt ccacgtcggc agtcgctccc cgcgaaccag aattgtttcc acgtcttcca
     1441 caccgccgaa gagcaggtcc ttcgctccaa gaaaaaagcg cgctaccggc tttcgtttcg
     1501 ccacccctcc gacgatctcg aactcagcca gcatttcatg accacggcgc tcaaggtggt
     1561 agatcgcgat aaggccgatc tgttcgcgcg tgatgtcagc cagtttccat tttggccgtt
     1621 tgccttccca catctgttgc agcgcctcgc cgagtgcctg ccgaacctgg aactcgcgcg
     1681 agccgttttc gacgaagtac gcgacaacgg gtatgacctg atgaccgtaa cgatccagaa
     1741 ctctttggaa cgtctcgtcc tcgccataaa cggcaaatac ctttgcggaa gttgccggat
     1801 accgctgcgc agcctcatac gcggccagcc catatttgag gcagaccgaa agtggtccga
     1861 ggtccgcctt gtcggcgaat acctgcgaca gcgggcattt cgcgtcacga gcacgcgcct
     1921 cgccggcgac tgcggcccgg acggccaatt cctcaaaccc acgccgatct gaagccatgg
     1981 tgaataggcc ggccatcaga gccgcgatca aaagaggcat aatgaacgtc ctgaacatgt
     2041 tccgttgctc cgcgggcgtc ggaacgtccc agccaattac gtgatctctg gcgccgcata
     2101 agcaatatag cgcaggtcac gatcatagca cgatcggccg cgacttctga ccgcaggcgc
     2161 tcgaaattct ctgcacggcc taccgacttg gggggccgtg ctgaacgcag tcatggccgg
     2221 ggttgagcca ccggtttcgg cctttggcca gccagatgat aaacttttcg aagaacgttg
     2281 tcatgcccgc gaaagcgggc atccagcctc tgggctgtgc cccaaacgca gtcacgggat
     2341 taatcgcgct ttcacgggcg atgacagccg ctttgagcat ttgattccgg acagatccta
     2401 atagccgtaa cgatcgaaga acagatcgcg gcggtcgcgg cgcaggtccc ttcgatcgag
     2461 ccgaagatcc cggcggtcgc gccggatgtc ggccagatcc ttcgatgcgt cggctaagcg
     2521 cccgaagcgc agatcgcggc ggagatcgcg gaagtcaccc cgcaaatcgg cgcggtcacg
     2581 ccgaatatcg aagcgatcgg cgcggagatc gcgtcgatcg gctcgaatgt ctgggcggtg
     2641 tccgtaccca taccaaccgg ccgaggcgac cgtcggggtc agagcggcgc cgccgaccgc
     2701 gactgcagtc gcgagtatca agatcatatt gcgaaccatg acaaatcctc cttttaagtt
     2761 cccctggttc accccgcgcc attcaagcgc atgccctgtg aaccacgggt gtgccgagga
     2821 ttcattttcg gtttatgtac attatctttt ggtaatgtgc ggaatggatg ccgcgcgttt
     2881 tcttattgaa ggtcatcgcg cgttcgcgaa aaccatcctc aatccgccgt agccctccgc
     2941 cggggccgaa acaacctgga tgccggactt ctcgtccctg gtacactggc caaggaaatg
     3001 catgaattcg cgtgcagcat ggcaaacgaa tggatcgaga tggctcggcg gtttggtgct
     3061 tatccgccgg tcgaggactt cctcggcaag gagaccctgg aggtcctcgg accgcatcga
     3121 aagctacatt atcgagatcc ggcagcgggg cgtaggattt gttggctgct cgatcttggc
     3181 caaaggacca ttgctcaccg ataagcaagg gacgcgcttg cggggctaca ttttgagccc
     3241 cgaagcgcac tacaacgggt gcccgatctt caaacgactg cctttcgtgc ccaacttctc
     3301 ttttcgcgtc tggcagcgaa agcgtgtcct tgacgtgctg gttgatttgc acaatcccgg
     3361 ttgggagtta cattgcggtg cggagcatta cggtaattgg aactgggtcg ggggcgaaat
     3421 cgtctgtctg gcgaaggaac tgtttccgcg ctttgcgtcg tccagttcac gagcgatatg
     3481 gcagaggggg acgatcaagg ccctccaaga aagatcaaga cccaccagga aaagacgtgt
     3541 gccgcccgtc aataaatcgt aggcgcgcca gttgagcatc agctcgatgt ttcggtcatg
     3601 aacggggtgc gaccgacagg tagcatgccc agaacggtga attagcgcca acaaggagaa
     3661 cgagcgtgag cgggaccacg atgaaagcgc tggtgttgcg ccggcacggc gggctgaccg
     3721 atctagaggt ggagaacgac tacccgattc ctcggacggc cgaggggcat gtggtgatcc
     3781 gggtgcgggc atcttccttc aactaccacg acgtcttcac gatgcgggga atgccgggca
     3841 tcaaggtgcc gttgccggtg gtgctcgggc tcgacatagc gggcgagatc gtggaggtcg
     3901 gcggtggcgt gttggcctgg aagccgggcg accgcgtgct cgtcaatccg cttaacaaga
     3961 aaaagggatt aatgggcgaa atgctcgacg ggggcatggc tgaatattgt ctggtagcgg
     4021 ccgatcagct ggtcgccatg ccggcgcacg tcacctttgc ggaggcggcg tccctcccgg
     4081 tggcctatgg cacggcccat cgcatgctga tcacgcacga cacgatccgc aaaggcgagc
     4141 gtgtgatggt gctgggtg
//
LOCUS       DATILV010000686         5234 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3742967, whole genome shotgun sequence.
ACCESSION   DATILV010000686 DATILV010000000
VERSION     DATILV010000686.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5234
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3742967"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..94
                     /locus_tag="VLJ17_16220"
     CDS             <1..94
                     /locus_tag="VLJ17_16220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-binding response regulator"
                     /protein_id="HSV24560.1"
                     /translation="KALNRGRAIDPIRTVRGAGYALNDRFVKSA"
     gene            complement(110..616)
                     /locus_tag="VLJ17_16225"
     CDS             complement(110..616)
                     /locus_tag="VLJ17_16225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GcrA family cell cycle regulator"
                     /protein_id="HSV24561.1"
                     /translation="MNWTDERVELLKKLWSDGLSASQIAAELGGISRNSVIGKVHRLG
                     LSGRAKSPSTSVPRQRKPRAHGQMMRIARPGIRGNTALAPLHCYEPELEPEPELIENI
                     IPLGQRCSILELTESKCHWPIGDPSSPDFFFCGGKTIEGLPYCGYHSRIAYQPAADRR
                     RDRRAVRG"
     gene            1071..2294
                     /locus_tag="VLJ17_16230"
     CDS             1071..2294
                     /locus_tag="VLJ17_16230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012336169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HSV24562.1"
                     /translation="MTSHLLPTYARVDLAFERGDGPWLFAADGERYLDFTAGVAVNGL
                     GHAHPRLTEALNAQAQKLWHVSNLFRIPEAERLAERLCAETFADLVFFCNSGAEAMEC
                     CIKVARKYQYASGRPERHRFITFEGAFHGRTLATLAAGGQKKYLEGFGPIVEGFDQLP
                     FGDLDAVRRAVRPETAAILIEPIQGEGGVRVAPTSFLRGLRELCDQHDLLLVFDEVQT
                     GIGRTGSFFAYQRCGIAPDVMGIAKAIGGGFPLGACLATTQAAKGMTAGTHGSTFGAN
                     PLAMAVGNAVLDVVLAPGFLDKVRRSAILLRQRLAEIKDRHPDVVRDLRGEGLLLGLV
                     AACPNDELVAAMRAEKLLAVAAGDNVVRMLPPLTIEEPEIADAIDRIDRAAKRIECAL
                     REKQQGGKEAAKVNS"
     gene            2291..3214
                     /gene="argF"
                     /locus_tag="VLJ17_16235"
     CDS             2291..3214
                     /gene="argF"
                     /locus_tag="VLJ17_16235"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004585 - ornithine carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HSV24563.1"
                     /translation="MNATPRHFLDLIDIAPSHLRAIIEDSRAMKQRGGGLSGKAVAGK
                     VLAMIFDKPSTRTRVSFDVAMHQLGGQTTVLTGQEMQLGRGETIADTARVLSRYVDAI
                     MIRTLDHEVLAELARYASVPVINGLTRRSHPCQVMADVMTFEEHRGAIRGRKVAWTGD
                     TNNVLTSWMHAACQFEFELAVATPAELAPKKLLLDWIRSSGANICIGHDVERAVANAD
                     CVVTDTWVSMGDRGGERRHNLLKPYQVNAQLMGKAKPKALFMHCLPAHRGDEVTDDVI
                     DGPQSVVFDEAENRLHAQKGILVWCLNSGLQ"
     gene            3211..4218
                     /locus_tag="VLJ17_16240"
     CDS             3211..4218
                     /locus_tag="VLJ17_16240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone"
                     /protein_id="HSV24564.1"
                     /translation="MTLSGVTSRAPTDHAADDTILPFEVATLDLRGRVVRLGPALDDI
                     LSRHDYPAPISKLLGEAIVLTVLLGSSLKFDGRFILQTKTEGPVRMLVVDFRSPGKVR
                     ACAQFDPSALNGLPDQPTTTLTGHLLGRGHLAMTIDQGTDMNRYQGLVALTGGSLEEA
                     AHEYFLRSEQIPTKVRLAVAEELRAGADGPRHRWRAGGMLLQFLPKKAERMRGPDLDP
                     GDAPEGTMPHVVPVDDAWIQGQALIATVKDIELIDPDLSSERLLYQLFHEHGVRVFRS
                     SEVEAKCSCSRDSVTNMLKSFSKDDRDHMIQDNAISVTCEFCSTKYVFAPADLEFAED
                     G"
     gene            complement(4276..4668)
                     /gene="apaG"
                     /locus_tag="VLJ17_16245"
     CDS             complement(4276..4668)
                     /gene="apaG"
                     /locus_tag="VLJ17_16245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017482710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Co2+/Mg2+ efflux protein ApaG"
                     /protein_id="HSV24565.1"
                     /translation="MYQAVTRNIAVTVSPRFLPERSSTAESRYFWAYTIEISNRSDIT
                     VQLRTRHWRITDGFGQLQEVRGAGVVGEEPVLEPGASFTYTSGVPLPTPSGFMAGTYG
                     MVTLDGEHFEIEIPAFSLDSPAAKRTIN"
     gene            4892..>5234
                     /gene="opgC"
                     /locus_tag="VLJ17_16250"
     CDS             4892..>5234
                     /gene="opgC"
                     /locus_tag="VLJ17_16250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016844074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OpgC domain-containing protein"
                     /protein_id="HSV24566.1"
                     /translation="MSLPKPGERDLRLDLFRGLALWLIFLDHIPSNIVNWVTIRNYGF
                     SDATEIFVFISGYTAAFVYGRAMHEQGAVVAGARILKRAWQVYVAHIFLFAIYTAEIS
                     YVAHSFENPLYG"
BASE COUNT         1018 a         1602 c         1546 g         1068 t
ORIGIN      
        1 caaggcgctc aaccgcggcc gcgccatcga tccgatccgt acagtccgcg gcgccggata
       61 tgcgctcaac gaccgcttcg tcaagagcgc ttgatcccag ctgcgttact catcctcgca
      121 cggcgcgccg gtcacgacgg cgatcggccg ctggctgata tgcgatccgg gaatgatatc
      181 cacaataggg caggccctcg atggtcttgc cgccgcagaa gaagaaatcc ggcgagcttg
      241 ggtcgccgat cggccaatgg cacttgcttt cggtcagctc aagaatcgaa cagcgttgcc
      301 ccaacgggat gatgttctca atcaactcgg gctccggctc gagttccggc tcataacaat
      361 gcaatggtgc cagtgccgta ttgccacgaa tccccggccg cgcaattcgc atcatttggc
      421 catgggcgcg cggcttgcgt tgacgcggca ccgaggtcga tggacttttt gcacgcccag
      481 ataggccgag ccgatgcacc tttccgatca ccgagttgcg ggaaatgccg ccgagctccg
      541 ccgcaatctg actcgccgac aatccgtcgc tccacagctt cttcaggagt tccacacgtt
      601 cgtccgtcca gttcatggtc caccgtcctt cgtacctggg cagccgcttg acggaatccg
      661 aaccctcccg gcggccaacc caaaaggccg ccgccggcaa cgctgccgct ccgcaaaaca
      721 aagaaaactg cccgccgcac gagatatcgt atcagcgtac ggtaatgcta ctatatcagg
      781 tgactcgcgc gcgcaagagt ccgcggtccg tttagtccac agtgtttcgt ccgagaccgc
      841 ttaaactgcc ccgtcatcca caacagatcc ctcacgaccc ggaaactgcg acgtggggaa
      901 ggggcatccc aaagcccacg ctggcacctg cgacgggggg gtgtgcaggg tcgttgacag
      961 acggctcagt cacaatacaa tgtgtctcgg tgccgcccag aggggcggca catttcgttt
     1021 cgtgcccatt ccgtcgtcgt tgccgacgac cttgacgaac gagccgcatc ttgacttcgc
     1081 acctactgcc cacttatgcg cgcgtcgatt tggccttcga gcggggcgac ggcccctggc
     1141 tgttcgcggc cgacggtgag cgttatctcg atttcaccgc cggcgtggcc gtcaacggcc
     1201 tcggccacgc ccatccgcgt ctcaccgaag cgttgaatgc ccaagcgcaa aagctgtggc
     1261 acgtgtcgaa tctgttccgg attccggagg ccgagcggtt ggcagagcgt ttatgcgctg
     1321 aaactttcgc ggacctcgtt ttcttctgca attccggcgc tgaggccatg gaatgctgca
     1381 tcaaggtggc gcgtaaatat cagtacgcat ccgggcgacc ggaacgccat cgcttcatca
     1441 cctttgaggg cgcatttcac gggcgcacat tggcaacgct cgcggctggg gggcagaaaa
     1501 aatatctgga aggctttggt ccgatcgtgg aaggcttcga ccaactgcct ttcggagacc
     1561 ttgatgccgt cagaagggcg gtcaggccgg aaaccgctgc gattttaatc gaacccatcc
     1621 agggtgaagg cggcgtccgg gtagcgccga catccttcct gcgcggcctg cgcgagctgt
     1681 gcgatcagca cgaccttttg ctggtattcg acgaagttca gacgggcatc gggcgaaccg
     1741 gcagcttctt cgcctaccag cgctgcggca tcgcgcccga cgtcatgggc atcgccaaag
     1801 cgattggcgg cggatttccg cttggcgcct gcctcgccac tacgcaagcc gccaagggga
     1861 tgacggctgg cacccatggc tcgaccttcg gggccaaccc gctggcaatg gcggtcggta
     1921 acgcggtgct cgatgtcgtc ctggcgccgg ggtttctcga caaggttcgt cggagtgcaa
     1981 ttctgcttcg ccaacggctc gccgagataa aggatcgtca tccggacgtc gtcagagact
     2041 tacgcggcga aggtctattg ctcggccttg tggcggcgtg cccaaacgac gaattggttg
     2101 ccgcaatgcg cgccgagaaa ctgctcgccg tcgcggccgg agacaatgtg gtgcgaatgc
     2161 tgccgccgct gaccatcgaa gagcccgaaa ttgctgatgc gatcgatcgg atcgatcgtg
     2221 ccgcaaagcg gatcgaatgc gcgctacgcg agaagcagca aggtggcaag gaagccgcca
     2281 aggtgaattc gtgaacgcca cccctcgcca tttcctcgat ctgatcgata ttgcgccgag
     2341 ccatcttcgc gccattatcg aggacagccg tgccatgaaa caacgtggcg gcggcctgtc
     2401 cggcaaagcg gtcgccggca aggtgctggc aatgatcttc gacaagccgt cgacccgcac
     2461 ccgcgtatct ttcgacgtgg caatgcatca gctcggtggt cagaccacgg tgctgaccgg
     2521 ccaagaaatg cagctcggcc gcggcgagac gatcgccgac accgcccgcg tgctgtcccg
     2581 ttatgttgat gccattatga tccgcactct cgatcacgag gtgctggcgg agcttgcacg
     2641 ctatgctagc gtaccggtga tcaatggact gacgcggcgc tcccacccgt gccaggttat
     2701 ggcggacgtt atgaccttcg aggagcaccg cggcgcgata cggggtcgca aggtggcgtg
     2761 gacaggagat actaacaacg tgctcacgtc gtggatgcat gcggcatgcc aattcgaatt
     2821 cgagcttgcg gttgcaactc ccgcggaact cgcgccgaag aagctgctgc tcgactggat
     2881 cagatcgtcg ggcgccaaca tttgtatcgg gcacgatgtc gaacgcgcgg ttgccaacgc
     2941 cgactgtgta gtcaccgata cctgggtgtc gatgggggat cgtggcggcg agcgccggca
     3001 caatctgctc aagccttacc aagtcaacgc ccagcttatg ggaaaagcaa agcccaaggc
     3061 cttattcatg cattgtctgc cggcccatcg gggcgatgag gttaccgacg atgttatcga
     3121 tgggccgcag tcggtggtat tcgatgaggc cgaaaatcgc cttcacgccc aaaagggtat
     3181 cctagtctgg tgtctcaatt cgggtctgca atgacgctct cgggggtcac ttcgcgtgcg
     3241 cctactgatc atgcggccga cgacacgatc ctgccgtttg aagttgccac tcttgacctc
     3301 cgcggccgtg tggttcggct ggggcccgca ctcgacgata ttctcagccg ccacgactat
     3361 ccggcaccga tctccaaact gctcggcgaa gcaatcgttt tgaccgtatt gctcggttcc
     3421 tcgctcaaat tcgacggccg tttcattttg caaaccaaga ccgaaggccc agtgcgcatg
     3481 ctggtggtcg attttcgcag ccccgggaag gtgcgggcct gcgcccagtt cgatccgtcc
     3541 gcgctcaatg gcctgccaga ccaaccgact accaccctca cgggccattt gttgggccgc
     3601 ggccatcttg ccatgacgat cgatcagggg actgacatga atcgctacca aggccttgtc
     3661 gcccttacgg gcggcagcct tgaagaggcc gctcacgaat atttcctgcg ctccgagcag
     3721 atccccacca aggtgcggct cgcggtcgcc gaagagttgc gagcgggcgc tgacggtcca
     3781 cgtcaccgtt ggcgtgctgg cggcatgctg ctgcaattcc tgcccaagaa ggccgagcgt
     3841 atgcgcggac ccgatctcga cccaggagat gccccggaag gcacgatgcc ccatgtggtg
     3901 ccggtggacg acgcatggat ccagggtcag gccctgatcg cgaccgtcaa agacatcgag
     3961 ctgattgatc ctgatttatc cagcgagcga ttgttatatc agcttttcca tgaacacggt
     4021 gtgcgcgtat ttagatcttc tgaggtcgaa gcaaagtgct cctgctcgcg cgacagcgta
     4081 accaacatgc tcaaaagctt ttctaaggac gaccgcgatc acatgatcca ggacaacgcc
     4141 atctcggtca cctgcgaatt ctgcagcacc aaatacgtct tcgcgcccgc cgacttggaa
     4201 ttcgcggagg acgggtgagg acgccgcgct atgggtattt ctgtcgcgcg cgaggcgctg
     4261 cggccagtca tgacactagt ttatcgtgcg ttttgcggct gggctgtcga gggaaaacgc
     4321 cggaatctca atttcgaagt gctcgccatc cagcgtgacc atcccgtagg tgccggccat
     4381 gaatccggac ggggtcggca gcggaacgcc gctggtatag gtgaacgatg ccccgggttc
     4441 gagcactggt tcctctccca cgacgccagc gccgcgcact tcctgcaatt gcccaaagcc
     4501 gtcggtgatg cgccagtgac gagtcctgag ctgaaccgtg atgtcgcttc ggttactgat
     4561 ttcgatcgta taggcccaaa agtagcggct ctccgcggtc gacgagcgtt caggaaggaa
     4621 gcgtggtgat actgttaccg caatattgcg tgttacggcc tggtacatag catcctcgtc
     4681 cacaaaacgt cgaaatggtg gagcaaccgg ttgctgacag tcaatgaagt tttattggcc
     4741 cggatcaacc gccgtgcgag cgatgacctc atactatcgt cgtattgtgc cgagccatac
     4801 ggtgcctttg gtgattggcc caccggtctc acctgtaaac cggtttactc cattatgaat
     4861 caactcgttg cgacccgttg aaggaagcgt gatgtcgcta ccgaaacccg gcgaacgcga
     4921 tctgcggctc gatctgttcc gcggacttgc gctgtggctc attttcctcg atcacattcc
     4981 gtcgaacatc gttaactggg tcactatccg gaattacgga ttttctgacg ccacggaaat
     5041 cttcgttttc atttctggct atacggctgc attcgtgtac ggccgtgcga tgcacgagca
     5101 gggcgccgtc gtggcgggcg cccgcatcct caagcgggcg tggcaggttt acgtagccca
     5161 catcttcctg ttcgcgatct acacggcaga gatttcgtac gtcgctcaca gtttcgaaaa
     5221 tccgctttac ggcg
//
LOCUS       DATILV010000687         5117 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1443293, whole genome shotgun sequence.
ACCESSION   DATILV010000687 DATILV010000000
VERSION     DATILV010000687.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5117
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1443293"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..458)
                     /locus_tag="VLJ17_16255"
     CDS             complement(<1..458)
                     /locus_tag="VLJ17_16255"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HSV24567.1"
                     /translation="MARLPSLDTLRVFSVAARHMSFTKAAGELHLTQSAVSHRVRALE
                     EELGVPLFHRLPRRLELTRAGQALAQRVDQAVADIARTIADLDLGGDTQRLTVTMLPS
                     VASRWLVPRLPRFHALHPDIELQLIADPRLLDLRAARIDLAIRFGRGAYPG"
     gene            complement(905..1246)
                     /locus_tag="VLJ17_16260"
     CDS             complement(905..1246)
                     /locus_tag="VLJ17_16260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24568.1"
                     /translation="MISIAVDEVSDIREPKVLKKFGVSAACDVKVQMTVRLINDIDVE
                     AATASPQIFGNYSQRCQAAAVRFGPFSAVIDGEPTDGSCHEFASAGLAKFVAACLNEG
                     YEYARLDLAPL"
     gene            complement(1702..3627)
                     /gene="asnB"
                     /locus_tag="VLJ17_16265"
     CDS             complement(1702..3627)
                     /gene="asnB"
                     /locus_tag="VLJ17_16265"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006608938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HSV24569.1"
                     /translation="MCGIAGFLDAGRSATADEAAAWARDMADAVKHRGPDDSDIWIDP
                     AAGIGLGHRRLSIIDLSPLGRQPMHSADGRYVISYNGEVYNFTELRAELAGLGHSFRG
                     GSDTEVMLAACREWGPEQAVTRFVGMFAIALWDRETATLHLIRDRMGVKPLYWCRRDG
                     VFLFGSELKALMAHPVWRGEIDIEAAAAFVRYSYVPGTATIFRHVHKLAPGAILTMQA
                     GAEPQITFYWRLRDVVAAPPIEDEREAVAELETILRDSIRGRMIADVPLGAFLSGGID
                     SSTVVALMQAQSTRKVRTFSIGFQEPGYDEANHAKEVAVHLGTDHTELYVTPRQTIDA
                     VPSLPKWFDEPFGDSSQIPTYLVSAMTRQHVTVALSGDGGDELFAGYLRYRIVDQVWR
                     RLGWVPQGVRRMAGAGLGALSEPLLDRAARLLPKRMRPLNAGRKVHRVATLLALPAED
                     VLFLELAAIWPNEDVLVPGSTGALRLAAAPDLACLLPDAVSRMQYYDATSYLPDDIMT
                     KVDRCSMAVALEAREPLLDHRLVEFVWKLPRRFKYDGRQTKRLLRQVLHRYVPRELVE
                     RPKMGFSIPLGNWLREDLRDWAEGLLSKKRLAVDGMFAVDEVHRLWDEHQTRRANREN
                     VLWNVLMFQAWKEHYRV"
     gene            3933..5027
                     /gene="gmd"
                     /locus_tag="VLJ17_16270"
     CDS             3933..5027
                     /gene="gmd"
                     /locus_tag="VLJ17_16270"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008446 - GDP-mannose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HSV24570.1"
                     /translation="MTQSNGADHGAKTALITGITGQDGALLAEFLLQKGYVVHGIKRR
                     SSSFNTGRVDHLYVDPHQEGARFFMHHGDLTDATNLIRIVQETQPTEIYNLAAQSHVQ
                     VSFETPEYTANADALGTLRLLEAIRILGMERRIRFYQASSSELYGMVREVPQRETTPF
                     YPRSPYAAAKLYAYWITVNYREAYGMHASNGILFNHEGPTRGETFVTRKITRAVAAIE
                     LGLQDRVYLGNLDAERDWGHARDYVEGMWMMLQQDEPDDYVLATGEKHSVREFIERAF
                     GHVGRQISWRGKGIDETGIDAKSGQILVEIDPRYFRPTEVEVLLGDPGKAHQKLGWRH
                     KTSFADLVNEMVDGDRKQVRLERERVNRHD"
BASE COUNT         1070 a         1541 c         1547 g          959 t
ORIGIN      
        1 cccggatagg ccccgcgacc gaagcgaatc gcgaggtcaa tgcgggcagc gcgaagatcg
       61 aggagacgcg gatcggcgat caattgcaac tcgatgtccg ggtgcagggc gtggaatcgg
      121 ggcagtcgtg gaaccagcca ccgcgacgcg acggatggca acatggtgac cgtcagccgc
      181 tgcgtatcgc cccctaggtc gaggtcggcg attgtgcgtg cgatatcggc gacggcttgg
      241 tctacccgtt gcgccaaggc ctgaccggca cgcgtcagtt cgagacggcg cggaaggcgg
      301 tggaacaaag ggacgccgag ttcctcctca agtgcccgca cgcgatggct aaccgcactc
      361 tgggtcagat gcaattcgcc cgccgccttg gtgaagctca tgtgccgcgc cgcaaccgaa
      421 aaaacccgaa gtgtgtcaag cgagggcaaa cgcgccatct ctcacgcctc ctgatacgca
      481 aacctggctc atgaacagca cgaagaataa tcgtttgtaa cggcggcccg atgctggcac
      541 gaagccagct gttgtgagga gcttgatgcc cacgagcttt cccacctacg cgacgacgtt
      601 gcgcgacctt ccaaaaggcc ggcgccggta cgtgatccag ttccgggaac gtggataaaa
      661 aagattgccg ctgggtgcga ggtgcccgct agacgaaaat aaattgatgg catcacatag
      721 cgcaccttcg ctagacgcgc aagaattcat tcttgccgag gctgtcggcc ctggtgacac
      781 atatcgacac ggttcctgat cttcttaagt ttgtttgaac cacgcggctg atgaaagatc
      841 cgaattgctg ccccagaatt ggtgaactta gatgagtaat gaacaggaca tacctatcag
      901 ccacttacaa cggcgcaaga tcgaggcgcg cgtactcata cccttcattc aagcatgccg
      961 cgacaaattt ggcgaggcca gcgctcgcga actcgtggca gctaccatcc gtcggctcgc
     1021 catcgatgac ggcgctaaat gggccgaaac gtacggctgc agcctggcat cgttgcgaat
     1081 agttgccgaa gatctgtggg ctggcggtgg cagcctcgac atcgatgtcg ttgatcaggc
     1141 gcacggtcat ctggacttta acgtcacacg ctgccgatac gccgaatttt ttaaggacct
     1201 tgggctcgcg gatatcggat acctcgtcca ctgcaatcga gatcatgcaa tgatcgcagg
     1261 cttcaatccc aacattgaac tcgtgcgaac gcagactctc atggagggag cctcgcattg
     1321 cgattttcgg ttccgcacga agccggtgag gtgcaggtaa ggacacctgc ggtatgaccg
     1381 tcgccgacat cacacttgcg gtgttcacat ttgcaacagc cttcatttct tagcctacgt
     1441 tgcgcagatt gccagagcga tcaaggatca cagtggtgcg caggccatct cgtttgggcc
     1501 atctgctcct cgcctcgcac gcttcggcga tggcatatgc gatcgagaac cagaaggatt
     1561 ggacgatggc tgccatgttt ccttggtaat gccctcggct gcgacgcgat tgtcctgatc
     1621 gcagcttgga agcgctctca acatcgcggg cgcaggatca agaaggcctt ctatgacggg
     1681 cactcctcag cccccgtagt ttcacacccg ataatgctcc ttccatgcct ggaacatcag
     1741 tacgttccac agtacgtttt cgcgattggc ccgccgcgtc tgatgctcat cccataatcg
     1801 gtggacttcg tcgaccgcga acatgccgtc gacggcgagg cgctttttcg acagcaggcc
     1861 ctcggcccaa tcccgcaaat cctcgcgcag ccagttgccg agagggattg aaaatcccat
     1921 cttgggccgc tcgaccagtt cgcgaggaac gtaacgatgg agcacctgcc gcaacagccg
     1981 tttcgtctgc ctgccgtcgt atttgaagcg tcgcggcaac ttccagacga actcgaccag
     2041 gcgatggtca agcagcggct cgcgggcttc gagcgcgacc gccatggaac aacggtcgac
     2101 cttggtcatg atgtcgtccg gcagatagct cgtggcgtcg taatactgca tgcgcgagac
     2161 ggcgtccggg aggaggcagg caaggtcggg ggcggctgcg agccgcaagg cgccggtcga
     2221 ccctggtacc agcacgtctt cgttcggcca gatcgcggcg agttccagga acagcacgtc
     2281 ctctgctggc aacgctagca gcgttgccac gcgatggacc ttgcgtcctg cgttgagcgg
     2341 ccgcatgcgc ttcggtagca gccgggcagc gcgatcgagt aggggctcgg acagcgcacc
     2401 aagccccgcg ccagccatac ggcgtacccc ctgcggtacc catcccaacc tgcgccaaac
     2461 ctgatcgacg atgcgatagc gcagatagcc ggcaaacaat tcgtcaccgc cgtcgccgga
     2521 caacgctacg gtgacgtgct gtcgcgtcat ggcggagacc aggtaggtcg gaatctgaga
     2581 tgaatccccg aatggctcgt cgaaccattt gggcaggctc ggcaccgcgt cgatcgtctg
     2641 gcgtggcgtc acgtaaagtt ccgtatggtc ggtgccgagg tggaccgcaa cctccttggc
     2701 gtggttggct tcgtcatagc cgggctcttg gaagccgatc gagaaggtgc gcaccttgcg
     2761 ggttgactga gcctgcatga gcgctaccac ggtcgacgaa tcgatgccgc cggacagaaa
     2821 tgccccgagc ggcacgtccg cgatcatgcg cccgcgtatg ctatcgcgca ggatggtttc
     2881 gagttctgcg accgcctccc gctcgtcctc gatcggcggc gcggcaacga cgtcgcgcag
     2941 gcgccaatag aacgtaattt gtggttctgc cccggcctgc attgtgagga tcgcgccggg
     3001 tgcgagtttg tgcacatggc gaaagatcgt tgcggttccc ggaacatagc tatagcgcac
     3061 aaaagccgcc gcggcttcaa tgtcgatctc gccgcgccaa accggatgcg ccatcagggc
     3121 cttaagctca gacccgaata ggaatacgcc gtcgcgccgg caccagtaca gcggcttgac
     3181 gcccatacgg tcgcgaatga ggtgaagcgt ggcggtctcg cgatcccaca gcgcaatggc
     3241 gaacatgccg acgaagcgcg ttactgcttg ctccggtccc cattcacggc aggccgcgag
     3301 cattacctca gtgtcggagc cgccgcgaaa gctatggccg agcccagcaa gttccgcgcg
     3361 cagctcggtg aagttataga cctcgccatt ataagagatg acgtagcgcc cgtcggccga
     3421 atgcatcggc tgacgcccga ggggggagag atcgatgatg gagagtctgc ggtggccaag
     3481 cccaatgccc gccgcggggt cgatccaaat gtcggaatcg tccgggccgc gatgtttgac
     3541 agcatccgcc atgtcgcgcg cccatgcagc ggcttcgtcg gcggtggctg accggccggc
     3601 gtcgaggaaa cctgctatgc cgcacatgtg accacatctc cagcgcatga agtggcagag
     3661 aagcgcacct ccccatgagg ttgatgcggc agctcttcac cggcccccaa tcgggagagg
     3721 tgacggacca agcgttggac gcgcataccc gctcggtaaa gggcacaacg aaaataatca
     3781 agcggtccgg gtgcagacgg atgacgcacc tcaaaggatg ccgtacacca cttgccgacc
     3841 ccgtcttgat gggatacctg ccgcggtcgg cggcgaatta ccgttctgcc aaaacgatgc
     3901 ggcgggatcg taggacaggg aatttttgga atatgacgca atccaatggg gcggaccatg
     3961 gcgccaagac cgcgctaatc accggtataa ccggccagga cggcgcactg ctggcagagt
     4021 ttctgctgca aaaggggtac gtggtccatg gcatcaagcg gcgttcatcc tcattcaaca
     4081 ccgggcgggt cgatcatctc tatgtcgacc cgcaccagga aggcgcacgg tttttcatgc
     4141 accacggcga tctgaccgac gccaccaatc tcatccgcat cgtccaggag acccagccga
     4201 cggaaatcta taatctggcc gcgcaatccc atgtgcaggt gagtttcgaa acgcccgaat
     4261 atacggcgaa tgccgatgcg cttggcacgc tgcggctcct cgaagccatc cgcatcctcg
     4321 gcatggagcg gcggataaga ttctatcagg cgtcttcttc ggagctatac ggcatggtcc
     4381 gggaggtgcc gcagcgcgaa accactccct tttatccgcg ctcgccttat gccgccgcca
     4441 agctctatgc ctactggatc acagtgaatt atcgtgaagc ctatgggatg catgcctcta
     4501 atggaatcct gttcaaccac gaaggcccga cccggggcga aacgtttgtc acgcgcaaga
     4561 tcacccgagc ggtcgctgcc atcgaactcg gccttcagga ccgggtttat cttggcaatc
     4621 tggacgccga gcgcgattgg ggccacgcgc gcgactatgt ggagggcatg tggatgatgc
     4681 tccagcaaga cgagccggac gactatgtgt tggccactgg cgagaaacat tcggtgcgtg
     4741 aattcatcga acgcgctttc ggccatgtgg gccgccagat ctcttggcgt ggcaaaggga
     4801 tcgatgaaac cgggattgat gccaagtccg gacaaattct cgttgaaatc gatccgcgct
     4861 atttccgccc gaccgaggtc gaggttctgc tcggcgaccc cggcaaggcg caccaaaagc
     4921 ttggttggcg ccacaaaacg agctttgcgg atctcgtcaa cgagatggtc gacggcgacc
     4981 gcaagcaggt gcgattggaa cgcgaacgcg tcaatcggca tgattagcgc agattgcgat
     5041 atgacgcgcg accccgccgc aaaagcacta ccgttcgacc ttgccggaag gcgcgttttc
     5101 gtggccggcc accgtgg
//
LOCUS       DATILV010000688         2548 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1185817, whole genome shotgun sequence.
ACCESSION   DATILV010000688 DATILV010000000
VERSION     DATILV010000688.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2548
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1185817"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            137..1501
                     /locus_tag="VLJ17_16275"
     CDS             137..1501
                     /locus_tag="VLJ17_16275"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV24571.1"
                     /translation="MDLSHPTAGATELPANQLDRLRVTSLHWAIVVLCALGLAFDVIE
                     SALSYALSVAFSSPPHQIAPYQLSLLLGSIAAGGAVGAPLLGWLADRSGRRLALSLSL
                     LVLAVTSLLAAASPDVAWLTFFRVLSGMALGAYPPLMATYLSDVLPAARRGMLILLVV
                     AIGALGAPAVVLLIRTLTPLQPFGLDGWRCALIIGAVGAAATGAAFCTLPESPRWLAA
                     AARFEAAIDAYNRFFRHAGYEAVLPDARLHAPVAGVERASFWFGAARAYRRRTAVLCA
                     LYFLAAWGMNSFPLLSGAVLVEKGFRVADSLLYLAVSLFGPSIGLLLAATFVDRIERR
                     TTLALCAAAMAATGIWFATSNAPVQLMATGTAYNMMVAIYGAALSVYGAELFPTALRA
                     TVSSTAWAVNRITSALAPLVLLPLLKSAGPLAMTAAIALAMCASAALLLAFGERGLSG
                     KPVV"
     gene            complement(1781..>2548)
                     /locus_tag="VLJ17_16280"
     CDS             complement(1781..>2548)
                     /locus_tag="VLJ17_16280"
                     /inference="COORDINATES: protein motif:HMM:NF016830.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate porin"
                     /protein_id="HSV24572.1"
                     /translation="ITTAFAPAVRVKLNITDTVYDQIYVQRSLPVRGVTGNPIYDEVS
                     SSKNNFWPNFGSDVAGTGVFLLDELGYRQHQKSGVLSTWVRGGLIFNTSEFTDFSSVR
                     SAGTKSDVHGVYLLADQQLWQQAPSSDASSYRGIYAGFTYMYTPPETAAFYQYYEARV
                     YWIGPFDSRPQDMLTFSYTHNDISKYITSLINLNSALTNVFANKYTNTYGLTYFARLM
                     PGVYGTVGIAYTDHPSISYFPTEGSSLNFLGALVFNL"
BASE COUNT          459 a          769 c          756 g          564 t
ORIGIN      
        1 cagactgaat cactgatatc tctgcgtcgc aacaaccgcc tttatcggca aataactacc
       61 gtctggcagt gccacgctct ctctttttgc caaacgcccg ctggttcggt cacggtgtgt
      121 ggggtagggt cagcccatgg atctttcgca cccgacggcc ggagcgacag agctcccggc
      181 gaaccaactc gatcgcctgc gggtcacgtc gctgcactgg gcgatcgtag tcctgtgcgc
      241 ccttggcctc gccttcgacg tgatcgagtc ggcgctcagc tatgcgctct cggtggcatt
      301 ctcgagtccg ccgcaccaaa tcgcgccgta tcagctctcg ctcttgctcg gatcgatcgc
      361 cgctggcggc gcggtcggcg ccccgctgct tgggtggctt gcagaccgca gcgggcgccg
      421 ccttgcgctc agcttgagcc tgctcgtgtt ggcggtgacc tcgctgctgg ctgcggcgag
      481 cccggatgtc gcttggttga cattcttccg tgtgctgtcc gggatggcgc tcggcgccta
      541 tcctccgctg atggccacct atctttctga cgtgctgccg gcggcgcgcc gcggcatgct
      601 gatcctcctg gtcgtcgcga tcggcgctct cggcgcgccc gccgtcgtgc tcttgatccg
      661 caccctcacg ccgctgcagc cattcggcct cgacggctgg cgctgcgcgc tgatcatcgg
      721 ggccgtcggc gccgccgcga ccggcgcggc gttttgcacg ctgccggagt cgccacgctg
      781 gctggccgcc gccgcgcgct tcgaagccgc catcgatgcg tacaaccgct ttttccgcca
      841 tgccggatac gaggccgttc tgcctgacgc gcggctgcat gcgcccgttg ccggtgtcga
      901 gcgtgcgagc ttctggttcg gtgcagcgcg tgcgtatcgg cggcgaacag ctgtgctctg
      961 cgcgctatat ttcctcgccg catgggggat gaacagcttt ccgctgctca gcggcgctgt
     1021 gctggtcgaa aagggattcc gcgttgcgga ttcgctgctc tatctcgccg tctcgctgtt
     1081 cggcccctcg atcggcttgc tgctggcggc aaccttcgtc gatcgcatcg aacggcgtac
     1141 gacgctggcg ctgtgcgcgg ccgcaatggc ggccacgggt atttggttcg cgacgagcaa
     1201 tgcgccggtg cagctaatgg cgacgggcac ggcatacaat atgatggtcg cgatttatgg
     1261 agccgcgctg tcggtctatg gtgcggagct gtttccgacc gcgctgcgcg caaccgtctc
     1321 ttcgaccgcc tgggcggtga atcgcatcac ctccgcgctg gcgccgctcg tcctgctgcc
     1381 gctgctcaaa tctgccggcc cgctcgcaat gacggcggca atcgctttag ccatgtgcgc
     1441 cagcgcggcc ctgctccttg cgttcggcga acgcggcctc tcgggcaagc cggtggtgta
     1501 gggtcggatg aagttaggtt gaattgatgc cgcggtgacg gtccattttt ttctactccc
     1561 acaagggaga aggaagagcg acgccacatt caacgatcac cgtctgaacg gacgtcggga
     1621 aacgagagcg cgagccggac caggtcgatc tgccggcgcg gtagcgcgct atgcggattt
     1681 gagcacgtag tagaaccgaa aggtgccggt ctggacccag aaaccatgtc atctcgcggg
     1741 aaacctatcc agcgacggca attgtgtctc acccaagggt ctacaaattg aagactagag
     1801 ctcctagaaa attcaatgaa gacccctctg ttggaaagta tgaaatactc ggatgatccg
     1861 tatatgcgat gccgaccgtt ccataaacgc caggcatcaa acgtgcaaag taggtgaggc
     1921 catacgtgtt ggtgtacttg ttcgcaaata cgtttgtaag tgcggaattc agatttatta
     1981 gagaggtaat atatttgcta atatcattgt gcgtatagct aaaggttagc atgtcttgcg
     2041 gacggctatc aaatggccca atccaatata cgcgtgcctc gtaatactgg taaaatgccg
     2101 cggtttccgg cggcgtatac atatatgtaa acccagcata tattccgcgg taggacgacg
     2161 catccgaaga cggagcctgc tgccacagct gttgatctgc caaaaggtaa actccatgca
     2221 cgtcggactt tgtgccggca cttctcaccg atgaaaaatc ggtgaactcg gatgtattaa
     2281 atatcagtcc gcctcgtacc cacgtcgaca gaacgcctga tttttggtgc tgccgataac
     2341 caagctcatc aagcagaaac actccggtcc ccgcaacgtc agagccgaaa tttggccaaa
     2401 aattattctt gctgctgctg acctcgtcgt aaatcgggtt gccggtaacg cctcttaccg
     2461 ggagactccg ttgaacataa atctggtcgt aaacggtatc agtgatattc agtttcacgc
     2521 gcacggccgg tgcaaatgcg gtggtaat
//
LOCUS       DATILV010000689         1530 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_672826, whole genome shotgun sequence.
ACCESSION   DATILV010000689 DATILV010000000
VERSION     DATILV010000689.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1530
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_672826"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(145..1221)
                     /locus_tag="VLJ17_16285"
     CDS             complement(145..1221)
                     /locus_tag="VLJ17_16285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014198268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HSV24573.1"
                     /translation="MAQTVCVIVSAADRERLQAIIGDRNQPRKHMERARFVLASAERE
                     PAQRVAAGVGVSRPTVWRWQQRYAEVGVEGLLRDKTRKPGKRPIATQTTARVVALTCT
                     TPPHQATHWTGRAMAEAVGISLRSVQRIWQAHQLQPHRIRTFKHSRDPSFAAKLVDVV
                     GLYVDPPAHAVVLSLDEKSQIQALDRTQPGLPLKPGRCQTMTHDYKRHGTTTLFAALS
                     VLDGTVIGRCMQRHRHSEFIRFLSAVEREVPAGKLIHAVLDNYATHKHPKVLAWLSRH
                     PRWIFHFTPTSASWLNAVENFFSKMTRQRIRRGVFRSIVDLQSAINAYLGEHNAHPKP
                     FVWTQSANAILAKLDRVPVFSECV"
     gene            complement(1154..>1530)
                     /locus_tag="VLJ17_16290"
     CDS             complement(1154..>1530)
                     /locus_tag="VLJ17_16290"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Hsp20 family protein"
                     /protein_id="HSV24574.1"
                     /translation="STKKSRSAPAEIIERSAVMAQAVRPVSHRRVYNEYADGGYERVF
                     TLSENIDRDRIEATLKDGVLNLVLPKAESARARKIELKASAMTHSVDSQGQWHVRCWA
                     YGSDSMCDRQRCRPGTAASDYR"
BASE COUNT          277 a          447 c          495 g          311 t
ORIGIN      
        1 cgtgcccgaa agcccggagt ggaaggagca acagcaacat tcctcgccca attcgccgcg
       61 catgcggcag gccatgacgc atgcaccggg ttctgccggg gtgtacgtac gggtgaatcc
      121 ctaaagtcca gggtgcgcta gtgttcagac gcattcagag aatacaggaa cgcggtcgag
      181 tttggcgagg atggcatttg cggattgggt ccagacaaac ggttttgggt gagcattgtg
      241 ctcgccaagg taagcgttga tagcgctctg taggtcgacg atcgaacgga agacgccgcg
      301 gcggatgcgt tgccgggtca tcttggagaa gaagttctcg accgcattga gccaggaggc
      361 cgaagtcggg gtgaagtgga agatccagcg cggatgacgg gacagccaag ccagcacctt
      421 gggatgtttg tgggtggcat agttgtcgag caccgcatgg atcagcttgc cggcggggac
      481 ttcgcgctcg acggcgctga ggaagcggat gaattcgctg tggcggtggc gctgcatgca
      541 gcgcccgatg acagttccgt cgagcacgct gagcgcggca aacagagtgg tggtgccgtg
      601 ccgcttgtaa tcgtgcgtca tggtctgaca acgccccggc ttgagcggca gtcccggttg
      661 ggtgcggtcg agcgcttgga tctggctctt ttcgtcgagc gagagcacca cggcgtgggc
      721 cggtggatcg acataaagcc cgacaacatc gaccagcttg gcggcaaagc tcggatcgcg
      781 cgagtgcttg aaggtgcgga tgcggtgggg ctgcagctgg tgcgcctgcc agatgcgctg
      841 caccgaacgc aacgagatgc cgaccgcctc ggccatggcc cggccggtcc aatgggtcgc
      901 ctggtgcggc ggggtggtgc aggtcagcgc caccactcgt gccgtggttt gcgtggcaat
      961 aggccttttg ccgggcttgc gggtcttgtc gcgcaacagc ccttcaaccc caacctcggc
     1021 gtagcgctgc tgccagcgcc atactgtcgg tcggctgacg ccgacgcccg ccgcgacccg
     1081 ctgcgccggt tcccgctcgg ccgaagcgag aacaaagcgc gcccgttcca tatgcttccg
     1141 cggttggttg cggtcaccga taatcgcttg cagccgttcc cggtcggcag cgctgacgat
     1201 cacacatact gtctgagcca taggcccagc atcgcacatg ccactgccct tgtgaatcta
     1261 ctgaatgcgt cattgcacta gctttgagct cgatctttct cgcccttgca ctctcagcct
     1321 tcgggagaac gaggttcaaa acgccgtctt tcagcgttgc ctcgatgcga tcccggtcga
     1381 tgttttccga aagcgtgaat accctctcgt aaccgccgtc ggcatattcg ttataaaccc
     1441 gccgatgact gacgggtctc actgcctggg ccatcactgc actcctttca atgatttcag
     1501 ccggcgcaga tctcgatttt ttggtcgatc
//
LOCUS       DATILV010000690         6228 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2976661, whole genome shotgun sequence.
ACCESSION   DATILV010000690 DATILV010000000
VERSION     DATILV010000690.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6228)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6228)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6228
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2976661"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..444)
                     /locus_tag="VLJ17_16295"
     CDS             complement(<1..444)
                     /locus_tag="VLJ17_16295"
                     /inference="COORDINATES: protein motif:HMM:NF012673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HSV24575.1"
                     /translation="MGRPLNDQPIVDDALLTKLTAAVAEAAGTALATAYNVRIKADQS
                     PVTDADERSEAILLQAMAELMPGVAVVSEERTHRPSQLGDIFALIDPLDGTKEFVAGL
                     SEYTVNLAIIQDGEPVVGIVAVPAEGIIYRGRARRGAERLTMSHGG"
     gene            585..1271
                     /locus_tag="VLJ17_16300"
     CDS             585..1271
                     /locus_tag="VLJ17_16300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphotransferase family protein"
                     /protein_id="HSV24576.1"
                     /translation="MSVPITLEALDLAALLCSRVCHDLISPSGAIVNGLEVLEESRDE
                     ETKSFALDLIKKSAKTASARLQFCRIAFGAAGSANAQVDLGDAQNVTRGFIEDEKVKL
                     AWNLPSALLPKNRVKLLLNMILVAAQSIPRGGIVAVEGDGPLDAMTFKISARGLNARI
                     PQAVPALLAGSPENGVVDAHAIQPFYAGLLGRASGLAVTIEADGDAIVVAARAVSALA
                     APSPVEPVSA"
     gene            1551..4262
                     /locus_tag="VLJ17_16305"
     CDS             1551..4262
                     /locus_tag="VLJ17_16305"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hybrid sensor histidine kinase/response
                     regulator"
                     /protein_id="HSV24577.1"
                     /translation="MDDLLREFLTETNESLDVVDVELVRFEQDPNNEKILANIFRLVH
                     TIKGTCGFLGLPRLEALAHAAETLMGKFRDGMPVTGAAVTLILSTIDRVKQLLDELEQ
                     NQQESAGEDRDLIGELEKMVLGTRAANVEPAGSREADAPSAPAPAATAGSLTFQVLER
                     QLRPGEVPLDDLERAFRETAVETVAAEAAAPIDAKAARQAPAATSKSGQTLGSPTEED
                     RPDSKVANQSIRVNVETLEHLMNMVSELVLTRNQLLEIVRRHEDSEFKAPLQRLSSVT
                     AELQEGVMKTRMQPIGNAWQKLPRVVRDLAAELDKQIELDMHGADTELDRQVLDLIKD
                     PLTHMVRNSADHGLESAAERRALGKPEKGTIRLSAYHEGGHIIIGISDDGRGLNTEKI
                     KAKALANGLATEAELEKMTEAQVHKFIFAAGFSTAAKVTSVSGRGVGMDVVRTNIDLI
                     GGTIDVTSVPCEGSSFIIKIPLTLAIVSALIVEAGGNRFAVPQLSVVELVRAQTNSDH
                     RIERIKDTPVLRLRNKLLPLIHLKKLLKMEDGTESEPENGFIVVTQVGSQTFGIVVDG
                     VFHTEEIVVKPMSSKLRHITMFSGNTILGDGSVIMIIDPNGIARGVGTTTTQVLGAEE
                     ETATSRSANDNTASFLVFRAGSAQPKAVPLSLVTRLEEVDATKIEMSSGRHMVQYRGH
                     LMPLVTVDAGATVRTEGMQPLLVFSDEGRAMGLVVDQIVDIVEDALHIEVVSETPGVL
                     GSAVIKGQATEIIDVGHYLPLAFEDWLRRKDMNSAVKRRTLLFVDDSAFFRNMLTPVL
                     KAAGYNVTTVASAEDALEYLRSGRTIDLVVTDIEMPGMDGFELAEAVRKDPRIENLPI
                     IALSSLTSREAIERGREVGFHEYVAKFDRPGLIAALKEQIAAVEEAA"
     gene            4276..4746
                     /locus_tag="VLJ17_16310"
     CDS             4276..4746
                     /locus_tag="VLJ17_16310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HSV24578.1"
                     /translation="MKVQHGSNGDALIEYVTVLLGGQLFGLPISQVQDVFMPQRLTRV
                     PLARPEIAGVLNLRGRIVTAIDMRCRLGLPRRDDTKPPMAVGIECKGESYGLLIDTVG
                     EVLKLDDNAREANPVNLDARLAQISAGVHRLDGQLLVILDVERVLDMGLEAMAA"
     gene            4781..5146
                     /locus_tag="VLJ17_16315"
     CDS             4781..5146
                     /locus_tag="VLJ17_16315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV24579.1"
                     /translation="MKTCLVVDDSSVIRKVARRILEGMQFEITEAEDGAEAFEKCRVQ
                     LPDVVLLDWNMPNVDGIQFLNMLRKMPGGDKPKVVFCTTENDLDHIARALDAGADEYI
                     MKPFDKEIVEAKFQQVGLV"
     gene            5232..>6228
                     /gene="cheB"
                     /locus_tag="VLJ17_16320"
     CDS             5232..>6228
                     /gene="cheB"
                     /locus_tag="VLJ17_16320"
                     /EC_number="3.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis-specific protein-glutamate
                     methyltransferase CheB"
                     /protein_id="HSV24580.1"
                     /translation="MSLAIPAVSIHANPLQVIRVMVVDDSVVVRGLVSRWLDEEPGIK
                     VVASLRTGREAVDHFDRFTPDVVLLDIEMPDLDGLSALPLLLQKDRNLIVIMASTLTR
                     HNAEASFKAMSLGAADYIPKPETNRGVTTSAEFRRELIEKVRHLGSRRKLRTARHAAP
                     APAPPRPESLPSRGAAPAVLPVPSGRLSLRPFGNVTPRVLLIGSSTGGPQALNAVMGQ
                     LGAVIDRAAVLITQHMPATFTTILAEHLARASHRRASEAVDHEPIVPGRIYVAPGGRH
                     MRVARRDGAPTISLEDGALINFCKPSVDPLFSSAAEMWGAKNLAVVLTGMGTDGTN"
BASE COUNT         1219 a         1920 c         1891 g         1198 t
ORIGIN      
        1 gccgccatgg gacatggtca gccgttcagc accccgcctc gcgcggcccc gatagatgat
       61 tccctcggcc ggtaccgcca caatgccgac cacaggctcg ccgtcctgga taatggcaag
      121 gttgacggta tattcactca acccggcaac aaattctttg gtaccgtcca gaggatcgat
      181 tagcgcgaag atgtcgccga gttgcgatgg gcggtgcgtc ctctcctctg acaccaccgc
      241 gacgccgggc atcagctccg ccatcgcctg cagcaatatg gcctctgagc gttcatccgc
      301 atcggtgacc ggcgattgat cggctttgat gcggacgttg taagctgtgg caagcgccgt
      361 gcccgccgct tcggcgaccg ctgcggtgag tttcgtcaat agggcatcgt ccacaatcgg
      421 ctggtcattt agcggccggc ccacgttcac ctcatccggt tcttaacgct cgttgtcatg
      481 tgcaccttgg cggcgcgcct gcgacagtgt atcagacgca gccctccgag gcagcaatgt
      541 gctgagtcgg cccaaggtgt cactcgcctg aggagcaaaa tcgcatgtcg gtacccatta
      601 cgcttgaagc tctcgatctt gctgcgcttt tatgttcgcg cgtttgccat gacctgatca
      661 gcccgtcagg cgccatcgtc aacggacttg aggtgttgga ggaatccagg gacgaagaga
      721 ccaagagctt cgcccttgac ctcatcaaaa agagcgccaa gacggcgtcg gcacggttgc
      781 aattttgtcg aatcgcattc ggggcggccg gctccgccaa cgcccaggtt gacttgggcg
      841 atgctcaaaa cgtaacccgc ggctttatcg aggatgagaa agtcaagctc gcctggaacc
      901 tgcctagtgc tttactgccg aaaaaccgcg tcaagcttct gctaaacatg attcttgtcg
      961 ccgcccagtc gattccgcgc ggtggaattg tggcggtgga aggcgatggt ccgctggacg
     1021 ccatgacctt caagatttcg gcgcgcgggc tcaacgcccg catcccgcag gccgtgccgg
     1081 cgctgcttgc cggtagtccg gagaatggag tggtcgatgc ccatgcgatc cagccgttct
     1141 atgcaggtct cctcggccgt gccagtgggc ttgcggtaac gatcgaggcc gacggcgatg
     1201 caatagtggt cgccgctcgt gcagtgtcgg cgctcgccgc gccatcacct gttgagccgg
     1261 tgagcgcgta gctccgacag tttgcaggct tttcgaaaat ggaccacgag ccggcaattt
     1321 ccggctcgca tacttctgaa gcgtcgactt ctcaacgaag cgtaaacggc acggcacttc
     1381 acaagccgaa gctccgcgac ggaaattgat tttgcaggtt tttgtcgaat ttgactaatt
     1441 tcgtcagtac cccgcacagc tgcaaccaaa attaaaccct tcgggtcgat actgcgcccg
     1501 ctctcttgag acgagtgcgg cgtcgtttgc gcccgatcgg gatggttgtg atggacgatt
     1561 tgttgcgtga gtttctgacc gaaaccaacg agagcctaga tgtcgtcgac gtcgagttgg
     1621 tgcgcttcga gcaggatccc aacaacgaga agattctcgc caatatcttt cggttggtgc
     1681 acaccataaa gggcacttgc ggttttttgg gcctgccgcg tctggaagcg ctcgcccatg
     1741 cggccgagac cctaatgggc aaattccgcg acggtatgcc ggtcaccggc gccgccgtca
     1801 cgctaatcct gtccaccata gatcgcgtca aacaattgct cgacgagctt gagcagaacc
     1861 agcaggagtc ggccggcgaa gatcgcgatc tgatcggcga gctcgagaag atggtgctcg
     1921 gcactcgggc tgcgaacgta gagccggctg gttccaggga ggccgacgcg ccaagcgcgc
     1981 cggcgcccgc ggcgacggct ggctcgctta ccttccaggt tctggaacgg caacttcgtc
     2041 ctggcgaagt tccgcttgac gatctcgaac gggccttccg ggaaactgcg gtcgagaccg
     2101 ttgcggcgga ggcggccgcg ccgatcgatg ccaaggcggc gcgtcaggcg ccggctgcga
     2161 cgtcgaagag cggacagacg ctgggcagcc cgaccgaaga agatcgaccc gactccaagg
     2221 tcgccaacca gtcgattcgc gtcaacgtcg agacgctcga acatctgatg aatatggtct
     2281 cggagttggt gctgacccgc aatcagctcc tcgagatcgt gcggcgccac gaggattccg
     2341 agttcaaggc gccgttgcag cgtctctcca gtgtcaccgc cgagctgcag gagggtgtca
     2401 tgaagacccg catgcagccg atcggcaatg cttggcagaa gctaccgcgt gtggtccgcg
     2461 atctcgccgc cgaactcgac aagcagatcg agctcgatat gcatggcgca gacaccgaac
     2521 tcgaccgcca agtgctcgat ctcatcaagg acccgctcac ccatatggta cgcaactcgg
     2581 ccgatcacgg cctggaaagc gcggccgaac ggcgggcgct gggcaagccc gagaagggta
     2641 cgatccggct ctccgcctat cacgagggcg gtcacatcat catcggcatc tctgacgacg
     2701 gtcgcggtct caataccgag aagattaagg ccaaggccct ggccaacggg ctcgccaccg
     2761 aggccgagct ggaaaaaatg accgaggcgc aggtccacaa gttcatcttt gcggccggct
     2821 tctccaccgc cgctaaagtc accagcgtat ccggccgtgg cgtcggaatg gacgtggtgc
     2881 gcacgaacat cgacctcatc ggaggcacca tcgacgtcac ttcagtgccg tgcgaaggct
     2941 cgagcttcat catcaagatt ccactgacat tggcgatcgt ttcggcgctg atcgtcgagg
     3001 caggcggcaa ccgtttcgcg gttccgcagc tctctgtggt tgagctggta cgggcgcaaa
     3061 ccaattccga tcaccgcatt gagcgcatca aggatacgcc ggtgctgcgt ctgcgcaaca
     3121 agctcttgcc gctgatccat ctcaagaagc tcctgaagat ggaggacggt actgaaagcg
     3181 agccggaaaa cggcttcatt gtggtgacgc aggtcggcag ccagaccttc ggcatcgtgg
     3241 tcgacggcgt gttccacacg gaagagatcg tggtcaagcc gatgtcgtcc aaattgcggc
     3301 acattacgat gttctccggc aacaccatat tgggcgacgg ctcggtgatc atgatcatcg
     3361 atccgaatgg aatcgcccgc ggcgtcggca cgaccaccac ccaggtgctt ggcgccgagg
     3421 aggaaaccgc aaccagccgc agtgccaacg acaataccgc gtcgttcctc gtattccggg
     3481 ccggctcggc ccagcccaaa gcggtgccgc tatcgctggt gacccggctt gaggaggtcg
     3541 acgccacgaa gatcgaaatg tcgagtggcc gccacatggt gcagtatcgc gggcacctga
     3601 tgccattagt cactgtcgat gcaggtgcga cggtccgcac cgaaggtatg cagccgctcc
     3661 tggtgttctc cgacgagggc cgcgcgatgg ggctcgtggt cgatcaaatc gtcgacatcg
     3721 tggaggacgc gctccatatc gaggtggtga gcgagactcc tggcgtgttg ggctcggccg
     3781 tcatcaaggg ccaagcgacg gaaatcatcg acgtcggcca ctatctaccc cttgccttcg
     3841 aggattggtt acgccgcaag gatatgaata gcgccgtaaa gaggcgcaca ctgctgttcg
     3901 tggatgactc cgcgtttttc cgcaacatgc tcaccccggt gctcaaggcg gccggctaca
     3961 acgtcacgac ggtcgcgtcc gctgaagatg cgctggagta cttgcgcagc ggccgcacca
     4021 tcgacttggt cgtcaccgac attgagatgc cgggcatgga cgggtttgag cttgccgaag
     4081 cggtccgtaa ggacccgcgc atcgagaact tgccgatcat cgcgctgtcg tcgctgacat
     4141 cgcgggaggc gatcgaacgc ggccgcgagg tcggcttcca cgaatatgtc gcaaaatttg
     4201 atcgccccgg tctgatcgcc gcgctcaagg agcagatcgc agcggttgag gaagccgcat
     4261 aagggagacg gcgcgatgaa ggttcagcac ggttccaatg gtgacgcctt gatcgaatat
     4321 gtcacggtgt tgctcggcgg tcagttgttc ggcttgccga tctcgcaggt gcaggatgtg
     4381 ttcatgccgc aacgcctgac tcgggtgccg ctagcacggc cggaaatcgc cggcgtgctc
     4441 aatctgcgcg gccgcatcgt caccgccatc gacatgcgct gtcgcctcgg gctgccccgg
     4501 cgcgacgaca ccaagccccc gatggcggtc ggtatcgaat gcaagggcga aagctacggg
     4561 ctcttgatcg atacggtcgg cgaagtcctc aagcttgacg acaatgcgcg cgaggccaat
     4621 cccgtcaacc tcgatgccag actcgcacaa atctcagctg gcgtgcatcg cctcgacggc
     4681 cagcttctcg ttatcctcga tgtcgagcgc gttcttgaca tgggactaga ggcgatggcc
     4741 gcgtaacacc gcggcaatag actcatcgga gcaacacacg atgaaaactt gtcttgtggt
     4801 cgacgattcc agcgttatcc gtaaagttgc ccgccgcatt ctcgaaggca tgcaattcga
     4861 gattacggag gcggaggatg gcgcggaggc cttcgaaaag tgccgcgtgc agcttcccga
     4921 cgtggtgctg ctcgattgga acatgccgaa cgtcgacggc atccaattcc tcaacatgct
     4981 gcgcaagatg ccgggcggtg acaagcccaa ggtggtgttc tgcaccaccg agaatgattt
     5041 ggatcacatt gcgcgcgcac ttgatgccgg cgcagatgag tacatcatga agccgttcga
     5101 caaggaaatt gtcgaggcca agttccagca ggtcggactc gtgtgactaa tcgcgcgcgc
     5161 gccccgagcc attgcttgcg tgcgatgatc ggaatccggg gcacaacaat gttaatcttc
     5221 atgtggatgt catgagcttg gcaattccgg cggtctcgat ccacgccaac cctctacagg
     5281 tgatccgcgt tatggtcgtc gacgacagcg tcgtcgttcg cggactcgtt tcacgctggc
     5341 tcgacgaaga gcccggaatc aaggtggtgg cctcgctgcg caccgggcgc gaagctgtcg
     5401 atcacttcga tcgctttacg cccgacgtcg ttctgctcga tatcgaaatg ccggatctcg
     5461 acgggctgtc ggcgctgcca ctgctgctgc agaaagaccg caacctcatc gtcatcatgg
     5521 cctcgacgct gacccgccat aatgcggaag caagcttcaa ggcgatgtcc ctcggcgctg
     5581 cagactatat tccgaaaccg gaaaccaatc gcggcgttac cacatcggcc gaattccggc
     5641 gcgagctgat cgaaaaagtc cgccatctcg gctctcgtcg caagttgcgt accgcgcgcc
     5701 acgccgcgcc cgcgccggct ccgccgcgcc ccgaaagtct cccttcccgg ggcgccgcac
     5761 cggcggttct gcccgttcca tccgggcgtt tgagcttgcg ccccttcggc aacgtgacgc
     5821 cgcgggtgct gctgatcggc tcttcaaccg gcggaccgca agccttgaac gccgttatgg
     5881 ggcaactcgg cgccgtgatc gatcgcgccg cggtattgat cacccagcac atgcccgcga
     5941 ccttcaccac cattctggct gaacatttgg ctcgcgcgag ccatcgtcgg gccagcgagg
     6001 ccgtcgacca tgaaccgatc gttccaggcc gcatctatgt cgcgcccggc ggtcgccata
     6061 tgcgggtcgc gcgccgtgac ggcgccccga cgatctcgct ggaagacggc gcgctgatca
     6121 atttctgcaa gccgtcggtc gatccgctgt tctcatccgc cgcagagatg tggggcgcca
     6181 agaatctcgc ggtcgtgctg accggaatgg gcaccgacgg caccaacg
//
LOCUS       DATILV010000691         6422 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1444580, whole genome shotgun sequence.
ACCESSION   DATILV010000691 DATILV010000000
VERSION     DATILV010000691.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6422)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6422)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6422
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1444580"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..615)
                     /locus_tag="VLJ17_16325"
     CDS             complement(<1..615)
                     /locus_tag="VLJ17_16325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24581.1"
                     /translation="MLHVSARLSAAGIATFMMLTAMVAIASVSDGQAAQAVGRSGVVQ
                     HAAPVQHAAPVFRAAPVQRAAPVFRAAPAQPAFRGTLVQQMGPIVPRSTAPVHVTPTI
                     PQQHNSGHFQAVNPNLQRINPNLPHNNPSALRPNLPLHNPNALRPNLPPSEAGSLRPD
                     LPRGEAGALRPNLPPSETGALRPNLPPGEAGALRRNLPPSEAGAL"
     gene            890..1660
                     /locus_tag="VLJ17_16330"
     CDS             890..1660
                     /locus_tag="VLJ17_16330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV24582.1"
                     /translation="MISEIVPRKFRNGLVELAYLDEGDGEPIVLVHGFASNKEVNWVQ
                     PGWVATLTRAGRRVIAFDNRGHGASTKLYDPALYRSDLMADDIRALLDHLGLARADVM
                     GYSMGARNTVFMALAHVERVRSAILGGLGIRLIKGVGLPESIANALEAPSLDDVADPQ
                     GRMFRSFADQTRSDRLALAACIRGSRQLLSPSDAARIAVPVLIAVGTKDSIAGSSHEL
                     AALVPGARAIDVPDRDHMLAVGDRVFKQAVLAFLAERP"
     gene            1766..2584
                     /gene="cysE"
                     /locus_tag="VLJ17_16335"
     CDS             1766..2584
                     /gene="cysE"
                     /locus_tag="VLJ17_16335"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009001 - serine O-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HSV24583.1"
                     /translation="MAQLQRVKPVESADPIWARVRSEAEAVVRQEPQLAPFIYASLLQ
                     HDALTDAVVQRISDRLDHPVMTGTTIRQVFLDALAESPEIGDAFRADIVATYDRDPAT
                     TRFIEPVLYFKGFHAIQTYRLAHWLWERHRKDFALYLQSRSSAVFQADIHPAAKIGRG
                     IFLDHATGLVVGETAVIEDDVSLLHGVTLGGTGNENGDRHPKIRKGVMIGAGAKILGN
                     IEIGHCARVAAGSVVIKPVPNNVTVAGVPAKVIGEAGCAEPSRTMDQMLYNVGV"
     gene            2769..2978
                     /locus_tag="VLJ17_16340"
     CDS             2769..2978
                     /locus_tag="VLJ17_16340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3126 family protein"
                     /protein_id="HSV24584.1"
                     /translation="MDVQEIRKLESYMRQLFGNTKLRVVPRPKKDDSAEVYVGEEFIG
                     VLFVDDEDDERSYNFQMAILAADLE"
     gene            complement(3015..3707)
                     /locus_tag="VLJ17_16345"
     CDS             complement(3015..3707)
                     /locus_tag="VLJ17_16345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24585.1"
                     /translation="MTLLAREQFPLRFRPAAMWTLFVLLFAGIAALAIGSIVYLLQPS
                     WSDAAAPIDAPPLPIVIAGVVFNIPPAAIRIPLQRRAGSQERVDLAYRWPDLAPPDPR
                     VADVSSRLFATIEGSRASMTPAERLKSVYPRYIDVPPEPDPGGLTIETFADGTPYQGE
                     DVVYDASQPDRFLVRCNRARSDLTLAMCLYERPFGDATLTFRFPRDWLADWRAVAAGI
                     DRLIEQWRPVGT"
     gene            3998..4330
                     /locus_tag="VLJ17_16350"
     CDS             3998..4330
                     /locus_tag="VLJ17_16350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24586.1"
                     /translation="MSPESIQLFLAVAFGFAVAGMISTGYQLLTRRAPSFRLLEGGAR
                     PETLAAVPFLAFAAPFIIMRNTLRWRRIAPRRFEFVMLATIMAGFWSMMSGTILVMGL
                     EAVARLFT"
     gene            4392..4931
                     /locus_tag="VLJ17_16355"
     CDS             4392..4931
                     /locus_tag="VLJ17_16355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HSV24587.1"
                     /translation="MPIFELAGERPDFPADGQYWIAETAVVIGRVRLKSEASVWWGAV
                     LRGDNEWIEIGERSQIQDNATLHTDPGFPLTVGRGCVIGHNVVLHGCTVGDGSLIGMG
                     AILLNGARIGANSIVGAGAIVTEGKTFPDNGLIVGAPARLIRTLDEKAAEMIANGAEI
                     YVRRWKHYTGALKRIGVEG"
     gene            5345..5806
                     /locus_tag="VLJ17_16360"
     CDS             5345..5806
                     /locus_tag="VLJ17_16360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24588.1"
                     /translation="MKTKLACVLGLAALVASLICGASGAYADVFEAESSVLQTLALDA
                     AANGAESSDKLHCVLYSDGADNCVVNTQFAVVDQPSSAIDETEPSATEPATPVQFVDA
                     VAVAVILSVTIAVPGQSPWDSEEAAPTVSIVESPAPDLILEAKTMVLDLAE"
BASE COUNT         1256 a         1837 c         2014 g         1315 t
ORIGIN      
        1 cagggcgccg gcctcactgg gcgggagatt tcttctcagc gcgccggcct cgccgggcgg
       61 gagatttggt ctcagcgcgc cggtctcgct gggcgggaga tttggtctca gcgcgccggc
      121 ctcgccgcgc gggagatctg gtctcagcga gcccgcctcg ctgggcggga gatttggtct
      181 cagcgcgttc ggattatgaa gtggaaggtt cggccgcagc gcgcttggat tgttgtgcgg
      241 gaggtttgga ttgatgcgct gcagatttgg attcacggcc tgaaaatggc cgctgttgtg
      301 ctgctgcggg attgttggcg tgacatggac cggcgccgtc gagcgcggca cgatgggccc
      361 catctgctgc actagagtgc cacgaaacgc cggctgcgct ggagcggcgc ggaacacagg
      421 ggcggcgcgc tggaccggag cagcgcggaa gacaggcgcg gcgtgctgga ccggagcggc
      481 gtgttgcaca acgccagatc tgccaactgc ttgcgccgcc tgcccatcgc tgacggatgc
      541 aatggctacc attgccgtca gcatcataaa agtagcgata cctgcagccg atagcctcgc
      601 agacacgtgg agcaagtcaa cctccctccg ggcgaatgtg ccgccctcgg ccatgccgcc
      661 ggattgcctg ttgccgggac aatgacccta tcttaacacc cgcgctaacc ttcgttttcg
      721 gtcgggcgtt caatttcatg tgacgtgtaa gaggggcaga aagacggcca aattcgtctt
      781 tgtcggcgta tccggctgat ctcgatcagg agggcttagt gcgcccatca tcaggatggt
      841 caagtccaac cgtccaccaa taagacccat gacgtcgagg aatctttgaa tgatttcgga
      901 aatcgttcca cgaaagttcc gcaacgggct ggtggagttg gcctacctcg atgaaggcga
      961 tggcgagccg attgttctgg tgcacggctt tgcctccaat aaggaagtga actgggtgca
     1021 acctggctgg gtggcgacgc tgacccgggc cggccggcgt gtgattgcct tcgacaatcg
     1081 cggccacgga gcatcgacta agctttacga tccggcgctc taccgctccg acctcatggc
     1141 agacgatatc cgcgccctgc ttgatcatct cggcctcgcg cgcgccgacg tcatgggtta
     1201 ttccatgggc gcccgcaaca ccgtattcat ggcgctcgct cacgttgagc gggtgcgctc
     1261 cgcgatcctc ggcggccttg gtattcgtct catcaagggc gtggggttac cggaatcgat
     1321 cgccaacgcg ctcgaggcgc cgtcgctcga cgatgttgcc gacccgcagg ggcggatgtt
     1381 ccgcagtttt gcggaccaga ccaggtccga ccgcctggcg ctcgccgcct gcattcgcgg
     1441 ctcgcgacaa ttgctgtcac cgtcggatgc ggcgcggatc gcggtgcccg ttctgattgc
     1501 agttggtacc aaagacagca ttgccggctc gtcccacgag cttgcagcgc tggtgccggg
     1561 ggcacgggcg atcgatgttc cggaccgcga tcacatgctc gctgtcggag atcgtgtgtt
     1621 caagcaagca gtgctggcgt ttctcgcgga gcgcccgtaa caagtgggct cggcgcaacg
     1681 gcctggtcct aggggtggcg catcgggcgg cagttcacta tttgtgctaa gcttgaacaa
     1741 ttgacgtcgt cgccggagga cagcaatggc ccaactgcag agggtgaaac cggtcgagag
     1801 tgccgatccg atctgggcgc gcgttcgcag cgaagcggaa gccgtcgtga ggcaagagcc
     1861 acaacttgct ccgtttatct atgcctcgct tctccagcac gatgcgttga cggatgccgt
     1921 cgttcagcga atcagcgacc ggctcgatca tccggtcatg accggtacca caatccggca
     1981 ggtcttcctc gatgcccttg cggaatcgcc ggaaatcggc gacgccttcc gggctgatat
     2041 agtggcgact tacgaccgcg atccagcgac cacgcgcttt attgaaccgg tgctgtattt
     2101 caagggcttt cacgcgatcc agacctatcg tctcgcccac tggctgtggg aaaggcaccg
     2161 caaggacttt gcgctctatt tgcaaagccg ttcgtcggcg gtgttccagg ctgacatcca
     2221 cccggcggcg aaaatcgggc gcggcatttt tctcgaccac gccaccgggc tcgtcgtcgg
     2281 cgagaccgcg gtgatcgagg acgacgtctc gctgctgcac ggcgtaacac tcggcggtac
     2341 cggcaacgag aacggcgacc gccaccccaa aatacgcaag ggcgtcatga tcggggccgg
     2401 cgcgaaaatt ctcggcaaca tcgagatcgg ccactgcgca cgcgtggcgg caggctcggt
     2461 ggtcatcaaa ccggtgccta acaatgtgac cgtcgccggc gtcccggcca aagtgatcgg
     2521 cgaagcgggc tgcgcggagc cgtcacgtac catggaccaa atgctttaca atgtcggggt
     2581 gtaacggttg attgcggaaa ccgcccactt ttccggcggt catacctaag gtctcatccg
     2641 ccctgtcaaa gacatgggaa tgtcatggga ttcaaacggg attcaatttg aatcgtatgg
     2701 cgcgctgagt tagccgttat acctcaggat tcataacacc cctggactca gggggcaaag
     2761 gagccgtcgt ggacgtccag gaaattcgca agctggaaag ttatatgagg cagctgttcg
     2821 gcaataccaa gctgcgtgtc gttccgcggc cgaaaaagga cgattccgct gaagtctatg
     2881 tcggcgagga gttcatcggt gtgctgttcg tcgacgacga ggacgatgag cgcagctaca
     2941 atttccaaat ggcgatactg gcggcagatc tggaataagt ggcttcgcac caagccgtcc
     3001 aggcgggccc gtgcctatgt tccgaccggc cgccactgct cgatcagccg gtcgataccg
     3061 gccgcgacag cgcgccagtc ggcaagccaa tcgcgcggaa accggaaagt cagggtggcg
     3121 tcgccgaacg gccgttcata aagacacatc gccaaagtga gatcgctacg cgcacggttg
     3181 caacgaacca ggaagcgatc aggctgcgac gcgtcataga cgacgtcctc gccttgatat
     3241 ggcgtaccgt ccgcaaacgt ctcgatggtg aggccgccgg gatctggctc tggcgggacg
     3301 tcgatatagc gcggatagac tgacttcaaa cgctccgccg gcgtcatgga ggcccgggag
     3361 ccctcgattg tggcgaacag tcgtgacgac acgtcggcaa cacggggatc cggcggcgcc
     3421 agatcgggcc agcggtaggc gaggtctacg cgctcctgcg acccggcacg gcgttgcaat
     3481 gggatgcgga tggcggctgg cggaatattg aaaaccacgc cagcaatcac aattggcagc
     3541 ggcggtgcgt caatcggcgc cgcagcatca gaccaacttg gctgcagcag gtagacgatc
     3601 gaaccgattg caagcgccgc gatgcccgcg aacagcaaga caaatagtgt ccacatggcg
     3661 gcgggtcgga agcgtagtgg gaactgttcc cgagccaata aagtcatgtt ctatctccgg
     3721 gggagcgggc gcgaatcatc gccaatatcc catatcggac gagccagggg gcatgaggaa
     3781 gccccagtag gcagcccgac tgctggcggg cgcgcgatcc ggaggcgcca tttaaccttt
     3841 ttttaaggaa gtcgtggcgg cagcggccgc gatgcggcac atgggatgtc gaactgaggt
     3901 ctaggcccgg ttcgacaagt cgacgcagca aggcgcgtca catcggtgtc tgaagatcga
     3961 ccgttcaagg tcggcgtcac aagggtcgag gtccaggatg tccccggaat ccatccagtt
     4021 gttcctggcg gtagcgttcg gctttgcggt cgccggcatg atatcgactg ggtatcagct
     4081 cctgacgcgc cgtgccccgt cgttccgctt gcttgagggt ggcgcccggc cggagaccct
     4141 tgcggcagtg ccatttctgg cgttcgcagc gccatttatc atcatgcgca ataccttacg
     4201 gtggcgacgc attgcgccgc ggcggttcga attcgttatg ctggccacca tcatggcggg
     4261 cttttggagt atgatgtccg gcacgatcct ggtgatgggg ctcgaagccg tggcgcgact
     4321 tttcacctaa cctccggctc gccaacgcct ttgcgacatg gcaagtatcc gctccggtaa
     4381 ggagcgcgat gatgccgata ttcgagcttg ccggcgaacg gccggatttt cccgcagacg
     4441 gacaatactg gatcgccgaa accgcggtcg tgattggccg cgtgcgcctt aaatctgagg
     4501 ccagcgtgtg gtggggcgcg gtgctgcgcg gagataacga gtggatcgag atcggtgagc
     4561 gttctcagat tcaggacaac gcgaccttgc ataccgatcc gggctttccg ctgacggtcg
     4621 gccgcggctg cgtgatcggg cacaatgtcg tgctgcacgg ctgcacggtc ggcgacggca
     4681 gtctgatcgg gatgggggca atccttctca atggggcgcg gatcggggcg aattcgatcg
     4741 tcggtgccgg tgcgatcgtc accgagggca agacgtttcc ggataacggc cttattgtcg
     4801 gcgcaccggc ccgtttgatc cgcacgctcg atgagaaggc ggcggaaatg attgcaaacg
     4861 gtgccgagat ctatgttcgg cgctggaagc actatacggg cgcgttgaag cgtattggtg
     4921 tcgaaggtta gtgctcgaaa aaaacctaaa agcgaaacgc tgctgacaat ctacgcgaaa
     4981 cttcgttaaa ccaagttgcc atatgggtta gcttcttgcg ggcatatctt gctcgactcc
     5041 gaagcgccaa gggcacgacc ttctacttca ctctattgag cacacacgca acccgtgaac
     5101 ggcattcaat tgcagggagc gaccttgcac ttgcgcaaaa ttgatgtttg cgacgttgcg
     5161 agcaattgtg ctcgtggtgt cgcaaatgga ttcttaacca aaccgattca ttatgatcat
     5221 gaggggttct gccgttcacg acgatcattc cacagtgccg ggtaggttca cctctcgccc
     5281 tgcgggcagc cctcgttcac agcagtccct cgcccatgta gcttagagta gcgtggagta
     5341 aaagatgaag accaaacttg cctgtgtctt ggggttggcg gcgcttgtgg cgtcgcttat
     5401 ctgcggtgcc tctggcgcct acgccgatgt ctttgaggca gagtcttctg tgttgcaaac
     5461 ccttgccctc gacgccgccg cgaacggcgc tgagagctcg gataagttgc actgcgtatt
     5521 atacagcgac ggtgccgaca actgcgtcgt caatacgcag tttgcggtgg tcgatcagcc
     5581 gtcgtccgcc atcgatgaaa ccgaaccgtc cgcaaccgag ccggcgacgc ccgtccaatt
     5641 tgtcgacgcg gtagcggttg cagtcatcct atccgtgacg attgcggttc ctggccaaag
     5701 cccatgggac agtgaagaag cggcgccgac agtatcgatt gtggagtccc cagctccgga
     5761 tttgattctc gaagcgaaaa ccatggtcct cgatctcgcg gagtaagacc gcggcgcttg
     5821 ttctgttgtg cggcggaaaa gtttcattcc gccgcatttt tattagagta ttttcccgat
     5881 tacgttgaat cattttccac gaagtcaccg ccggcatgcc ccggccgtcc acgtcttatt
     5941 cgcggagggg gccgtaagaa agaggtggct accagcgaca agcgcgggcg cgacgcagga
     6001 tcagtcctga tgggaggtgc gccggcgcgc tatcgacgat taatacgtta ccttcgcaaa
     6061 cccatttttt tcagatacgt caatttggtg gcaattttaa gattaattgg acatctttaa
     6121 taagattttc accagtttag ccaaaaatcg atttaccaga aaaacagatc agcctctcaa
     6181 tcgcctaacg gcttccagtt gagtttggat gttacgtgtc tcgggctggc gatcgcttcg
     6241 cctggacgct gctggagcat tcatgccggc tgcgatgtca catgccctgg ttcggcggcg
     6301 ttgcagcgtt cgcgtcgaaa atgtcgccgc agtaccgctt gagccgcaca ttgcctgagg
     6361 tcactgcgtc tgaaaggtgc gtatggagtg tcacccatga gcgtcgatga atgctatccg
     6421 ga
//
LOCUS       DATILV010000692         7457 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3236873, whole genome shotgun sequence.
ACCESSION   DATILV010000692 DATILV010000000
VERSION     DATILV010000692.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7457)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7457)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7457
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3236873"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..511)
                     /locus_tag="VLJ17_16365"
     CDS             complement(<1..511)
                     /locus_tag="VLJ17_16365"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HSV24589.1"
                     /translation="MARTSFIVLASLGILTGIIFTIDPSLDLQVASFFRDLVARPEVR
                     RFDRIVETTRQIGPLLIVAAIVPAVVSLAMKVFWPPRPTPMSSRAALFLILSLALGPG
                     LLVNGVLKENWARPRPGMVTQFGGDYTFMPWWDPRGTCDSNCSFVSGETSSAVWMTAP
                     AILVPPPWRY"
     gene            complement(723..1853)
                     /gene="proB"
                     /locus_tag="VLJ17_16370"
     CDS             complement(723..1853)
                     /gene="proB"
                     /locus_tag="VLJ17_16370"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014439051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004349 - glutamate 5-kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HSV24590.1"
                     /translation="MSGTLPTIHEFRRIVVKVGSSLLIDAAAGRVRQTWLASLVDDIA
                     ALHREGRDILVVSSGAIALGRSVLRLPKRPLKLEESQAAAAVGQIELARTWSEALVHH
                     GIGAGQILVTLGDTEERRRYLNARSTIAKLLEWRAVPVINENDTVATNEIRYGDNDRL
                     AARVATMASADLLVLLSDVDGLYDAPPGQSATAQLIPVVERITPEIEAMAGAAPSQLS
                     RGGMQTKIEAAKIATTAGTHMVIGSGRVDHPLRAIASTAPKTWFLTPGNPVTSRKKWI
                     AGSLEPKGTLTIDAGAVAALRRGNSLLPVGVIRVDGQFARGDAVIVRGPDGAEIGRGL
                     VAYDAADAEKLKRRPSGDILILLGIEGRAEMIHRDDLALGRE"
     gene            complement(2015..4228)
                     /locus_tag="VLJ17_16375"
     CDS             complement(2015..4228)
                     /locus_tag="VLJ17_16375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014439403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HSV24591.1"
                     /translation="MTYTNFKLVTDSDGIALLTWDVPDRSMNVITLPGIEELSAIVEQ
                     LVADAGVKGVVVTSAKEAFCAGADITLLESLGRTFATFVKEHGEEQAALRLFEESRKL
                     SLLYRRIETCGKPWVAAINGTAVGGGFELALACHHRVAAQNPKTRLGLPEIKVGLFPG
                     AGGTIRISRMLAPADALQFLLKGDQIRVERAKAMKLIDAVVPPDELITAAKGWIKAGG
                     KAKNPWDVDGFRLPGGLVFSKAGMQTFPAANAIYRRETYDNYPAARAILQVVYEGLQL
                     PMDLALRVESRWFAKILRTPEAGAMMRSLFVSMQDLNKGARRPANIPPTKFKRVGIIG
                     AGFMGAGIGYVTAQAGIDVVLIDRDQDSADKGKAQSHKLITERVNKGRATAADRDALM
                     SRITAAADYAALRDCDLVIEAVFEDRSVKNETYAKAQAAMGTEVIFGSNTSTLPITSL
                     AQEFKDPSRFIGIHFFSPVERMMLVEIILGKDTGNAALAAALDYVRAIHKTPIVVNDS
                     RGFYTSRVVGTYLREGHLMLTEGVPAAMIENVGRMAGMPVGPLALNDEVAVDLAWKIV
                     KATEADLGPEAIDARQKALLTAMVEKLGRFGRKNRKGFYDYPERGQKKLWPGLADLQP
                     AKLDPDTIDVQELKDRLLGIQALETARCFEENVLTDVREADVGSILGFGFAPFSGGTL
                     SYIDMMGAKHFVALCERLAAKHGTRFAPSGLLVDMATRNETFYGRFAPGPRVKAA"
     gene            complement(4240..4713)
                     /locus_tag="VLJ17_16380"
     CDS             complement(4240..4713)
                     /locus_tag="VLJ17_16380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSV24592.1"
                     /translation="MPKIDIDSLKTDSITGYPEPFRQIVLGRIRKRLGNAAGLTQFGV
                     NLTTLRPGAASSQRHWHAAEDEFVYVLAGEVVLCEDDGEVVLRPGDAAGFKASVANGH
                     CLVNRSDRDAMYLEVGTRAIRERAEYPDIDLRAERDKKGMRYLHKSGEPYPGSER"
     gene            complement(4733..5941)
                     /locus_tag="VLJ17_16385"
     CDS             complement(4733..5941)
                     /locus_tag="VLJ17_16385"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HSV24593.1"
                     /translation="MPDAFIYDHVRTPRGRGKADGALHEVTTLNLATQALATLKDRNA
                     LDPALVDDVVMGCVDPVGEAGGDIARVAAICAGYGNGVPGVQINRFCASGLDAVNFAA
                     AEVMSGQHDMTVGGGVESMSRVGIGASGGAWPVDPAIALRSYFLPQGISADLIATKYG
                     FSRDDVDAYAVESQQRAAVAWEEGRFAKSVIPVKDPNGITILGKDEHMRPSTTMQSLA
                     QLKPSFVQIGELGGFDAVAIQAHPEVEAVVHVHHAGNSSGIVDGAAAVLVGNAEAGRR
                     AGLKPRARIRAFANIGSEPAIMLTGPLDVTKKVLRKARMSLGDIDLFEVNEAFASVVL
                     RFMQAFDLDNSKINVNGGAIALGHPLGATGAMILGTAIDEMERRNAGTALVTLCIGIG
                     MGTATIVERV"
     gene            complement(6075..>7457)
                     /locus_tag="VLJ17_16390"
     CDS             complement(6075..>7457)
                     /locus_tag="VLJ17_16390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014439405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase C-terminal
                     domain-containing protein"
                     /protein_id="HSV24594.1"
                     /translation="AVLLTHGTAEQKSLYVPKMVAGEWTGTMNLTEPQCGTDLGLIRT
                     KAVRQPDGSYKINGTKIFISAGEHDLTANIVHLVLARIEGAPEGTRGLSLFVVPKVMP
                     NPDGTLGARNAVSCGSIEEKMGIHGNATCVMNYDGATGWLLAQENHGLQAMFVMMNEA
                     RLGVGLQGLALSEVAYQNAAQYAKDRLQGRALTGAKFADKPADPIIVHPDVRRILMTI
                     RAFNEAARALVMWTSIKSDVARHSDNAKEREGADDHMGLLTPVMKAVLTDLGFSNAVM
                     AQQVFGGHGYIQEWGMEQFVRDARIPMIYEGANGIQALDLVGRKLGKDGGRAIMAFFG
                     EVQSYVKEQSADAAMKPLVEPVGKALGHLQQATMWFMQNAMTKPDNAGAGATDYTHLF
                     GLVVLGYMWCQIAAAAHRKLAADSSGRMNAKLVTARFFMERMLPETAAHLARIQSGAG
                     SLMELPAEAF"
BASE COUNT         1412 a         2344 c         2285 g         1416 t
ORIGIN      
        1 cgtagcgcca aggaggaggc accaaaatgg cgggagctgt catccagacc gccgacgagg
       61 tttcgccaga aacgaacgaa cagttcgagt cgcaagtgcc gcgcggatcc caccagggca
      121 tgaaggtgta gtcaccgccg aactgggtca ccattccggg acgtggccgt gcccagtttt
      181 ccttgagaac cccgttgacc agcagtccgg gtccgagcgc cagcgataaa attagaaaca
      241 gcgcagcgcg agacgacatt ggagttgggc gcggcggcca gaatactttc atcgccaggg
      301 agaccaccgc cggcacaatc gccgcaacga tcaagagtgg gccgatttgt cgcgtggtct
      361 caacaatccg atcgaaacga cgaacttccg gtcgggccac caagtcgcga aaaaatgacg
      421 ccacctgaag atcaagagat ggatcgatgg taaaaatgat ccccgttaaa atgccaaggg
      481 acgccagaac gatgaaggag gtgcgtgcca cagaacgtcc gccgggtcgc gggaaaacag
      541 cgcagaatga tggcattcgg tatgtcgcaa atttcagcgt tctacaatcc gggtgtccac
      601 ggtttgcgaa ccgctttacc ggctctttgg ggtccgaaag tccgttccta ctcgtgtaca
      661 ttccacgtat ggcgacgcgg attaaatttt gtccatcttg gtgcaggggt gtggacgagg
      721 gctcactccc ggcccagcgc gagatcgtcc cgatgaatca tttcagcccg gccctcaatt
      781 ccaagtagaa tcaagatgtc tccggacggg cgacgcttga gcttttcggc atcggcagcg
      841 tcgtaggcca cgagacctcg accgatctcg gcgccgtccg gacctcgcac gatgacggca
      901 tcgccacgtg caaactgtcc atcgacccga atgaccccga ccggcagcag gctattgcct
      961 cgccgcaatg ctgccaccgc gccagcatcg atggtgagcg tgccctttgg ttccagcgag
     1021 cctgcaatcc acttcttgcg cgaagtcacc gggttgccgg gggtcaggaa ccaagtcttg
     1081 ggtgcagtgg acgcgatcgc tcgtagcgga tggtcgacgc ggccggaacc gatcaccatg
     1141 tgggttccgg ccgtggtcgc gattttggca gcttcgatct tggtctgcat gccgccgcgc
     1201 gacagttgag aaggcgccgc gcccgccata gcctcgattt ccggcgtaat gcgctcgacg
     1261 accggaatga gctgtgcggt cgcgctttga ccgggcggag catcgtagag gccatccaca
     1321 tctgacagca ggaccaacag gtccgcactc gccatggtgg caacgcgggc agccaggcgg
     1381 tcgttgtcgc cgtaacggat ttcgttggtg gcgactgtgt cgttctcgtt gatcaccggc
     1441 accgcacgcc attcgagcag cttggcgatg gtggagcggg cgttgagata gcgccgccgc
     1501 tcctcggtat cgccgagcgt caccaggatc tggccggccc cgatgccgtg atggacaagg
     1561 gcctctgacc atgtgcgtgc aagctcgatc tgcccgaccg ctgctgctgc ttggctttcc
     1621 tcaagcttga ggggccgctt gggcaaccga agcacggacc ggccaagcgc gatggcgccc
     1681 gaggacacca caagaatgtc gcggccttcg cggtgcaggg cagcaatgtc gtcgaccagc
     1741 gaagcgagcc aagtttgcct cacccggccg gcggccgcgt cgatcaggag cgacgagccg
     1801 accttgacga cgatacggcg gaattcgtga attgttggga gcgtgccgga catgccgctt
     1861 gatcaagcca tcgcgccccg cgccatcgcc gggcttgcgg ggcgggattt accaggacaa
     1921 ggcggggaat gaaatggccc gcgataagag atgcgcgcag gttcgcacac ccgcgttcaa
     1981 cgcgggtggc gggttaaaga gaacctggct tacgttaggc cgcctttacg cgcggccccg
     2041 gcgcgaaccg gccgtaaaaa gtctcgttcc gcgtcgccat gtcgacgaga agccctgacg
     2101 gcgcgaagcg ggtgccgtgt ttcgcggcta gcctttcgca caacgccaca aagtgtttcg
     2161 ctcccatcat gtcgatatag gacaaggtgc cgcccgagaa cggcgcgaac ccgaagccca
     2221 ggattgagcc gacgtcggcc tcgcgaacgt cggtcagcac gttttcctca aagcagcgcg
     2281 cggtctccag cgcctggatg ccgagcagcc ggtctttgag ttcctgcaca tcgatggtgt
     2341 cggggtcgag ctttgccggc tgcaggtcgg cgaggccggg ccacagtttc ttctgcccac
     2401 gctccggata gtcgtagaaa cccttacggt tcttgcggcc gaagcggccg agtttctcga
     2461 ccattgcggt aagcagtgcc ttctggcggg cgtctatcgc ctccggaccg agatcggcct
     2521 cggtggcctt gacaatcttc caggcaagat cgactgcgac ctcatcattg agcgccagtg
     2581 ggccgaccgg catgccggcc atgcggccga cattctcgat catggcggcc ggcacgcctt
     2641 cggtcagcat cagatggcct tcgcgcagat aggttccgac cacgcgcgag gtgtagaaac
     2701 cgcgggaatc gttgaccacg atcggggtct tgtggatggc gcgcacataa tcgagcgctg
     2761 ccgcgagcgc ggcgttgccg gtgtctttgc cgagaatgat ctcgaccagc atcatcctct
     2821 ccaccggcga aaagaagtga atgccgatga aacgcgacgg atctttgaac tcctgcgcca
     2881 gcgacgtgat aggcagggtt gaggtgttgg aaccgaagat aacctcagtc cccatggcgg
     2941 cttgcgcctt ggcgtaggtc tcgttcttta cagaacgatc ctcgaacact gcttcaatga
     3001 ccagatcgca atcccgcaat gccgcatagt ccgccgcggc agtgatgcgc gacatcagcg
     3061 catcgcgatc agccgccgtg gcgcggccct tgttgacccg ctcggtgatc agcttgtggg
     3121 attgcgcttt gcccttgtcg gccgagtcct ggtcgcgatc aatcagtacg acgtcaatgc
     3181 ccgcctgcgc cgttacgtag ccaatgccgg cgcccatgaa gccggccccg atgatgccga
     3241 cgcgcttgaa tttcgtcggc ggaatatttg cgggacgccg cgcccccttg ttgaggtcct
     3301 gcatcgacac aaacaacgac cgcatcatgg cgccagcctc cggggtgcgg aggattttgg
     3361 cgaaccagcg cgactccacc cgaagcgcaa ggtccatcgg caattgcaat ccctcgtaca
     3421 ccacctgcag gatcgcccgc gccgccgggt aattgtcgta ggtctcgcgc cggtagatcg
     3481 cgtttgcggc cggaaaggtt tgcatcccgg ccttggaaaa aacgagcccg cccggcaggc
     3541 gaaagccgtc tacgtcccac gggttcttgg ccttgccgcc ggccttgatc cagcccttgg
     3601 cggcggtaat gagttcatcg ggcggcacca cggcgtcgat caatttcatt gctttggcgc
     3661 gctcgacgcg aatctgatcg cctttgagca gaaattgaag cgcatcggcc ggggccagca
     3721 tgcgcgagat tcgaatggtg ccgccggcgc ccggaaacaa tccaaccttg atttccggca
     3781 ggccgaggcg cgtcttcggg ttctgcgccg caacgcggtg gtggcacgcc agcgccagct
     3841 caaagccgcc gcccaccgcg gttccgttga tggccgcgac ccagggcttg ccacaggtct
     3901 caatgcgccg atagagaagc gacagcttgc gactttcttc gaacagccgc aacgccgcct
     3961 gttcctcccc gtgctccttg acgaaggtcg caaaggtgcg gccaagcgat tccagcaggg
     4021 tgatgtcggc gccggcgcag aacgcctctt tggccgaggt gacgacgaca cccttgacgc
     4081 ccgcatcggc cacaagctgc tcgacgatcg ccgacagttc ctcgatgccc ggcagcgtga
     4141 tgacgttcat ggaacggtcc ggcacatccc aggtgaggag cgcgatgccg tcactgtcgg
     4201 tcacgagctt gaaattggtg taggtcatgg atttctccgc taacgctccg agcccggata
     4261 gggctcgccg gatttgtgca gatagcgcat gccttttttg tcgcgctcgg cgcgcaggtc
     4321 gatgtctgga tattcggcgc gctcgcggat tgcccgcgtt ccgacctcga ggtacatggc
     4381 atcgcggtcg gatcggttga ccaagcagtg gccattggca acactggcct tgaatccggc
     4441 tgcatcaccg ggccgcagca cgacctcgcc gtcgtcctcg cacagcacaa cttcaccggc
     4501 caggacatac acgaattcat cttcagccgc atgccagtgg cgttgcgagg acgcggcgcc
     4561 gggcctcaag gtggtgagat tgacgccgaa ctgtgtgagc ccggcggcgt tgcccagtcg
     4621 cttacgaatg cgtccaagca cgatttgccg gaacggctcc ggatatccgg ttatcgaatc
     4681 cgtcttaagg ctatcaatat cgatcttcgg catttcggat gctccgcttt gcctacacac
     4741 gctccacgat ggtggcagtt cccatgccga tgccgatgca tagggtgacg agcgcagtgc
     4801 cggcattgcg ccgttccatt tcgtcaatcg cggtgccgag aatcatggca ccggtggcgc
     4861 caagcggatg gccgagcgca atcgcgccgc cgttgacatt gattttcgaa ttgtcgagat
     4921 cgaacgcctg catgaatcgt agcaccaccg aggcaaaggc ctcgttgacc tcgaacagat
     4981 cgatatcgcc aagcgacatg cgggctttgc gtagcacctt tttggtgacg tcgagcggtc
     5041 ccgtgagcat gatggcgggc tctgaaccga tattcgcgaa cgccctgatc cgcgcccgcg
     5101 gcttgaggcc ggcgcggcgg cccgcctccg cattgccgac cagcacggcg gccgcaccgt
     5161 cgacaatgcc ggacgaattg cccgcgtgat gaacgtgaac gacagcttcg acttccggat
     5221 gggcctggat tgcgactgca tcgaaacctc caagctcgcc tatctggaca aacgacggct
     5281 tgagttgcgc cagcgactgc atggtggttg acggccgcat gtgctcgtcc ttgccgagga
     5341 tcgtgatgcc gttagggtcc ttcaccggga tgaccgactt ggcaaagcgg ccttcctccc
     5401 acgcgacggc agcgcgttgc tggctttcga ccgcgtaggc gtcgacgtca tcgcgagaga
     5461 aaccgtattt ggtggcgatc aagtcggcag agatgccttg cggtaaaaaa taggacctca
     5521 gcgcaatggc gggatcaacc ggccaagccc ctccggacgc cccgatgccg acccgactca
     5581 tggattcgac cccgccgccg accgtcatgt cgtgctggcc ggacatcact tcggcggccg
     5641 caaaattcac ggcgtcgagc ccggacgcgc aaaaccggtt gatctgcacc cccggcacgc
     5701 cgttaccata gcccgcgcaa atcgctgcca cccgcgcaat gtcgccgccc gcttcgccga
     5761 ccggatcaac gcagcccatc accacgtcgt ccacaagggc gggatcaagc gcgttacgat
     5821 ccttcaaggt ggcgagcgcc tgggtggcga gattgagggt tgtcacctcg tgcagcgccc
     5881 catcagcctt gccgcggccg cgcggcgtac ggacgtggtc gtaaatgaaa gcgtcgggca
     5941 tgggggctcc tcgctggcta agggttcatc tgccataagt aggatgggtt gagcgtcaac
     6001 gaaacccatc atcgatcatg ccccacgtag aggccctaga tgggtatcgc tttcgctcta
     6061 cccatcttac acgtctaaaa cgcttcagcg ggcaattcca tcaaggagcc ggccccgctc
     6121 tgaatgcggg cgagatgtgc cgcagtctcg ggaagcatcc gctccatgaa gaagcgtgcc
     6181 gtcacgagct ttgcgttcat gcggccagac gaatcggcgg cgagcttgcg gtgcgccgcc
     6241 gccgcgatct ggcaccacat atagccgagg acgacgagac cgaagagatg cgtgtagtcg
     6301 gtcgcgccgg cgccggcatt gtcgggcttg gtcatggcgt tctgcatgaa ccacatggtg
     6361 gcctgctgaa ggtgcccgag tgcctttccg accggttcga ccagcggctt catggcggca
     6421 tcggcactct gttccttaac gtagctttgc acctcgccaa agaatgccat gatggcccgt
     6481 cctccatctt tgccgagctt gcgcccaacc agatcgagtg cctgaatgcc gttcgcgccc
     6541 tcgtagatca tcgggatgcg ggcatcgcgt acgaactgct ccatgcccca ttcctggatg
     6601 taaccgtgac cgccgaacac ctgctgcgcc atcacggcat tggaaaagcc gagatcggtc
     6661 aacacggcct tcataactgg ggttagcaga cccatgtggt cgtcggcgcc ttcgcgttcc
     6721 ttggcgttat ctgagtgacg cgccacgtcg cttttgatcg acgtccacat gacgagcgcg
     6781 cgggcggctt cgttaaaggc ccggatcgtc atcaagatac gccgcacgtc cggatgcacg
     6841 atgatgggat cggccggctt gtcggcgaat ttcgcgccgg tcagggcgcg gccctggagc
     6901 cgatccttgg cgtattgcgc ggcattctga taggccacct ctgataacgc gagcccttgc
     6961 aagccgacgc caagccgcgc ctcgttcatc atgacgaaca tggcctgaag gccgtgattt
     7021 tcctgcgcca gcagccaacc ggtagcgccg tcgtaattca ttacgcaagt agcgttgccg
     7081 tggataccca tcttctcctc gatcgagccg cacgacacgg cattgcgcgc accgagcgtg
     7141 ccatcgggat tcggcatcac tttaggcacc acaaacagtg acagcccgcg cgtaccctcc
     7201 ggcgcccctt cgattcgcgc cagcacgagg tgcacgatgt ttgccgtaag gtcgtgctcg
     7261 ccagccgaaa tgaaaatctt ggtcccgttt atcttataac tgccgtccgg ctgccgcacc
     7321 gctttcgtgc ggatgagacc gagatcggtg ccgcattgcg gctcggtcag gttcatggtg
     7381 ccggtccact cgccggcgac cattttcggg acatacagcg atttctgctc cgccgtgccg
     7441 tgggtcagca gcaccgc
//
LOCUS       DATILV010000693         7768 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1187665, whole genome shotgun sequence.
ACCESSION   DATILV010000693 DATILV010000000
VERSION     DATILV010000693.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7768)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7768)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7768
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1187665"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1407
                     /locus_tag="VLJ17_16395"
     CDS             <1..1407
                     /locus_tag="VLJ17_16395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24595.1"
                     /translation="LLPTGGDDAPVRGLTQTRSTEAPDDFTLSAFAQMGSQALDSPAE
                     LLGERTRAVSATRKPARQFIASRGRGSIIADVTMSDKLNSAQVEVREQASNTQIAKLR
                     LQVRDRIGVVELLEIDNSGRMFVLTENIPNNSKRPSAAFVVQFSPQGVQESIYDIPLQ
                     ESVSLSRRFIAISPDGDVYFLRSRKTEVDVVGVGSRRVRSTAIIDNPTLPRFTDAETR
                     ITNKGPIAAVRPLTRQDVVQTAFGFEGLQWRLTPANYGPDPDTTCTGFNRIRRPGYLS
                     GKLNQEVRGVPYCWGCHGSLNQFRTRIANGMLAGNVCTHNDPRPDVAGVDCSAFVSAA
                     WGLANHFTTAVIPAITTELTNAWDLQPGDALNKAGTHVMLFLRFTPDRKVEVMESSTG
                     GCNGRVCRNVYPLASLLARGFKAVRFNALQEQLVASTAVPDGGKSAGNKEAIHKVATD
                     SETPHVSHHKRHRQEAGR"
     gene            1404..3164
                     /locus_tag="VLJ17_16400"
     CDS             1404..3164
                     /locus_tag="VLJ17_16400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004197 - cysteine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="caspase family protein"
                     /protein_id="HSV24596.1"
                     /translation="MSIAFKGAGSFFRSSCLAVSVLGSMATCSLMFATDASAQVATLR
                     PPQGGEVRALVIGIDAYQFVPPLRGAVADARDIESTLRRQGVTDITALYDAAADRGTV
                     MRTLGELVQRSRPGDLVVLSIAGHGVQEPEHVKGSQPDGLDNVFVLAGFNPKTGAGTQ
                     QRIIGTEFNHVIRQFESKGTYVMFVADTCYGGGLAREIDPRAGELSYRQAPRYSLTVD
                     NLQPISTASDAFLSDIDFQRTAFLAAVDRNTKAPEVRIPGVPGFRGALSYAVARAFEG
                     AADVNRDDRVSQTELFSYVRQVAYQLSDQRQQVVTAGPIARNVDAEAVFERTRAVVLL
                     DAVQPAETRPQAPSSQPPAATASPGTQTTRPPALPERPPAVATALGTVRIAVLGNQRD
                     LLANLEAREARFEVVATKDNPDLIWDPVSHDVLAGADVVARGIDRADLASVIDRVAAV
                     NGFKRLAAKGPQAVRLLPDDKVHRRDARIEVQVSGIAQRALLMFNIAGDGTVQSLYPY
                     GSDKRIIDTPDYKFSVRVGEPFGADQVVAISSAQRLGDLEEALKKMSQRRTAVEVFKL
                     VERYAPADARIGATSIYTAP"
     gene            3184..3864
                     /locus_tag="VLJ17_16405"
     CDS             3184..3864
                     /locus_tag="VLJ17_16405"
                     /inference="COORDINATES: protein motif:HMM:NF025684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4384 domain-containing protein"
                     /protein_id="HSV24597.1"
                     /translation="MKSQWCTIVLRTAVGLSAAVLVGTAVLAQAPRSVTILPDVPEAP
                     QTAPASTISPMRLELLNATAKVENPAGVSVDLIPTLEVSAGSKIGFRISTKKIGYLVL
                     VDVDANGKLTQIFPNPTAATRGVREAANLIKPGRPLTIPQIGTPYAGFEFVADLPAGV
                     AMVVALLSDKPVQVVDLPDTPPPAFAPGDTLKYVRDQARTLKVPNPENGHLEQPNWSI
                     DGKFYLIK"
     gene            complement(4332..4868)
                     /locus_tag="VLJ17_16410"
     CDS             complement(4332..4868)
                     /locus_tag="VLJ17_16410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HSV24598.1"
                     /translation="MSTRRIFVAAAPALIFALASTVFAQQGPNLGKAISPEDLASWDI
                     SIGPDGAGLPSGSGTVKQGEAVFVAKCQACHGEKGAGTPNDRLVGGQGSLPGDRPPIK
                     TVGSYWPYATTLFDYIRRAMPFNETKSLTNDEVYGVVAYLLNLNGVIPENDTVDAQSL
                     PKVVMPNRDGFVTFTRGK"
     gene            complement(4855..6117)
                     /gene="soxC"
                     /locus_tag="VLJ17_16415"
     CDS             complement(4855..6117)
                     /gene="soxC"
                     /locus_tag="VLJ17_16415"
                     /EC_number="1.8.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007601503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite dehydrogenase"
                     /protein_id="HSV24599.1"
                     /translation="MKETSWTETEQVAGNGLLHRRMFLAGGAIAMGAMVDQAGAAPLA
                     VEPWMKIPGSPFNGYGQPSKYEEKVARTWASAPGTGGTGSSRTPHHLLNGMITPSGLH
                     YERSHSGIPDISPDTHRLVIHGLVKRPLVFTLDDLGRYPMESRISFLECAGNSGALFA
                     KEPAAANVQAIHGLLSCSEWTGIKLSVLLQEAGIEPSAKWVLAEGADAAGMSRSFPIE
                     KALDDAMICLYQNGERVRPANGYPVRLLLPGFEGNMNVKWLRRIKLTEGPTMTKDETS
                     KYTILLPPGKALQFVFPMEAKSMITHPSPGLTVRGPGFYEISGLAWSGYGKVTKVEVS
                     GDGGKSWGLAALQEPVLSKAATRFRMAWQWDGGPVVLQSRSTDETGFVQPSRSQLISL
                     RGDRGNYHNNMIQSWAVAGNGEVKNVYA"
     gene            complement(6281..6736)
                     /locus_tag="VLJ17_16420"
     CDS             complement(6281..6736)
                     /locus_tag="VLJ17_16420"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007591846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HSV24600.1"
                     /translation="MNAEDNADAARLQAIAEMQPPFVRLMGTDIIEVSRDRVVAEFVV
                     REELTNRNGALHGGVVMAIADNLGATATFLNMPKDAGTTTIESKTNFFAAVPRGDTVR
                     AECTPLHRGRTTMVWQTRITRGDGKLAAIVTQTQLITRKDAPPYKGGFL"
     gene            complement(6866..>7768)
                     /locus_tag="VLJ17_16425"
     CDS             complement(6866..>7768)
                     /locus_tag="VLJ17_16425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24601.1"
                     /translation="DRRAERGTEFDVAGSYNDVFKSHRRTGTRTSMIVDPPNGRIPPL
                     TPEAQKINAIEREFRLALLQATETCKIKYATCDGGKYDPTPSPRRTELPPRYNTARMN
                     RHDGPEDGTLADRCLTAGLPGIGGFRRIVQTPGGIAMFYDVGQGQGWQRNIVMDGSSH
                     LPANIHQWYGDSRGHWEGNTLVVDVTNFSPKNDFQGSRENLHLVERWTRIGPTSLEYV
                     VTIEDPSVWTQPWTVMQVFTKQSDEENRIYYEPRCNEGNYALPGLLRGARIEELAFAE
                     GRGPDPATKDSATSISGAEDDPLR"
BASE COUNT         1449 a         2390 c         2379 g         1550 t
ORIGIN      
        1 ctgctcccga ctggtgggga cgacgcgccg gtacgcggat taacccagac acgttccacc
       61 gaggcgccgg acgattttac cctttcggca ttcgctcaaa tgggctcgca ggcactcgac
      121 agccccgcgg agctgctggg cgaacggact cgcgccgtca gcgccaccag gaagcccgct
      181 cgccaattta tcgcttcgcg agggcgtggc tcgatcatcg ctgatgttac catgagcgac
      241 aagctcaaca gtgctcaggt ggaggtgcgc gagcaagcct ctaacaccca gatcgcaaaa
      301 ctgcgcctcc aggtgcgaga ccgcatcggc gtcgtcgagc ttctggagat cgacaacagc
      361 ggccggatgt ttgttctcac cgaaaacatc ccgaacaatt caaaacgccc atcagcagct
      421 ttcgtggttc agttttcgcc gcagggcgtg caggaaagca tctacgacat cccgctgcag
      481 gaaagcgttt cgctgtcgcg ccgattcatt gcgatttcgc cggacggtga cgtttatttt
      541 ctgcgctccc gaaagaccga ggtcgacgtg gtcggtgtcg gatcgcgccg cgtgcggtcc
      601 accgccatca tcgacaatcc caccctgccg cgttttacgg atgcggaaac ccggattacc
      661 aacaagggcc cgatcgcggc ggtgcggccg ttgacgcgcc aggatgtggt gcaaacggcg
      721 ttcggcttcg aaggcttgca atggcgtctt acgccggcga attacggccc cgaccccgac
      781 acgacatgta ccggatttaa tcgcatccgg cgcccaggct acctcagtgg caagctcaat
      841 caggaggtac gcggcgtgcc ttactgctgg ggatgccacg gctcgctcaa tcagtttcgc
      901 accaggatcg cgaacggcat gctggccggc aatgtgtgta cacataacga tccgcgcccc
      961 gatgttgccg gcgtcgattg ctccgcattc gtgagcgccg cttgggggct cgccaatcac
     1021 ttcaccaccg ccgtcattcc ggcgatcacg accgaactca ccaatgcgtg ggatttgcag
     1081 cccggcgatg ccctcaacaa ggccggcacg cacgtcatgt tgtttctgcg ctttacgcca
     1141 gatcgcaagg tcgaggttat ggagtcgtcg accggcggat gcaacggccg ggtctgccgc
     1201 aatgtctatc cgcttgcctc gttgctggcg cgcggcttca aggcggtccg ctttaacgca
     1261 ttgcaggaac agttagtagc ctccacagcg gtgcctgatg gcggcaagtc ggcgggcaac
     1321 aaagaagcga tccacaaagt ggcgactgat tccgaaaccc ctcatgtgag ccatcataag
     1381 aggcacaggc aagaggcagg gcgatgagta tcgcattcaa gggcgccggt tccttcttta
     1441 gatcgtcgtg tttagccgta tcagtgctcg gatcgatggc gacctgcagc ttgatgttcg
     1501 ccactgatgc ctcggcgcaa gtggcgacgc ttcgtccccc gcaaggcggg gaggttcgcg
     1561 ctttggttat cggcatcgat gcctaccagt tcgtgccgcc gcttcgtggc gccgtcgcgg
     1621 acgcgcgcga catcgagtcg acgctacgac gccaaggtgt gacagacata actgcccttt
     1681 atgatgcagc cgccgaccgc gggacggtga tgcgtaccct cggcgagctg gtgcagcgca
     1741 gccggcccgg tgatctggtg gtgttgtcga ttgcgggtca cggcgtgcag gagcccgagc
     1801 acgtcaaagg gtcgcagccc gatggcttgg acaatgtctt cgtgctcgcc ggcttcaacc
     1861 cgaagaccgg ggcgggcact cagcaacgca tcattggcac cgaattcaac catgtcatca
     1921 ggcaattcga gtccaagggc acctatgtca tgttcgtggc cgacacctgc tatggcggcg
     1981 ggctggcgcg cgaaatcgac ccgcgcgcag gggaattgag ctatcgtcag gcgccgcgct
     2041 attcgctgac ggtcgataat ctccagccga tctccaccgc cagcgatgcg ttcttgagcg
     2101 atatcgattt tcagcgcacg gcgtttctcg ccgcggtcga tcgcaacacc aaggccccgg
     2161 aagtccgcat cccaggcgtg cccggatttc gcggcgcgct gagctacgca gtggcgcgcg
     2221 ccttcgaagg cgcggcggac gtaaatcggg acgaccgggt ctcgcagact gaattgtttt
     2281 cctatgtgcg ccaagtggcc tatcagttgt ccgatcagcg gcagcaggtg gtgaccgccg
     2341 gtcccattgc acgcaacgtc gatgcggagg cggttttcga gcgcacccgc gcggtcgtac
     2401 tgctcgacgc ggtgcagccg gccgaaacgc gcccgcaagc gccgtcgtct caacctcccg
     2461 ctgcgacggc atcgccaggc acccagacca cgcgtccgcc ggcgctaccg gagcgtccgc
     2521 cggcagttgc gacagcgctg ggtacggttc ggatcgcggt gctcgggaat cagcgcgatc
     2581 tattggccaa tttggaagcc cgggaggcgc gcttcgaggt cgtcgcaacc aaagacaacc
     2641 ctgatctgat ttgggatccg gtgtcccatg acgtgctggc cggtgcggac gtcgttgctc
     2701 gcgggattga ccgcgctgac ctcgccagcg tcatcgaccg cgtggccgcc gtcaacggat
     2761 tcaagcgtct tgccgccaaa ggaccgcagg ccgtgcgcct cctgcctgac gacaaggtcc
     2821 atcggcgcga cgcgcgcatc gaagtacagg tgtccggcat agcgcagcgc gcgctcttga
     2881 tgttcaacat cgcaggcgac ggcacggtgc aatccttgta tccgtatggc tcggataaac
     2941 gcattatcga cactccggat tacaagttct cagtgcgggt gggagagcct ttcggggctg
     3001 atcaggtggt cgccatctcg tcggcgcagc gactcggcga tctcgaagaa gccttgaaaa
     3061 aaatgagtca gcgtcgcact gcggtcgagg tcttcaagtt ggtcgagcgc tatgcaccgg
     3121 ccgatgccag gatcggcgct accagcatct ataccgcccc ttagcttggt tcgagggcgc
     3181 cacatgaaat cgcagtggtg tacgatcgtc cttagaaccg ccgtcggctt gtcggctgcg
     3241 gtcttggttg ggactgcggt tcttgctcag gcgccgcgat cggtaacaat tctgcccgat
     3301 gttccggaag cgcctcagac ggctcccgcg tccaccattt cgccgatgag actcgagctt
     3361 ctgaatgcga ccgccaaggt cgagaatcca gcgggcgtgt cggtcgatct cattcccacg
     3421 ttggaggtgt ccgccggttc gaaaatcgga ttccgtatta gcaccaaaaa gataggctac
     3481 ctggttctcg tggatgtcga tgcaaacgga aaacttacac agatattccc aaatccgact
     3541 gcggcgaccc gcggcgtgcg cgaggcagcc aatctcatca agccagggcg cccgttgacc
     3601 attccgcaga tcggcacccc ctatgcgggg ttcgaattcg tcgccgatct gcctgccggt
     3661 gtcgccatgg tggttgcact attgagcgac aaaccggtgc aagtggtcga tttgcctgac
     3721 acgccgcccc cggcatttgc gccgggcgat accctgaaat atgtccgcga ccaagcccgg
     3781 accctgaagg tgccaaaccc ggagaatgga cacctggaac agccaaactg gtcgatcgac
     3841 ggaaagttct acctgatcaa ataggtcagt agcgaacgtc aatcaaatgc tgcaatcaga
     3901 tacattcaaa aacagcattt tcaccagggt cggtgcgaac tgcgagtatc cgtgaagaat
     3961 gtccatattt agaacagtgg gcccgcgcca attctgcggc ctgttcacgc gtgatccccg
     4021 ccatcgggac ggcccctccg atctcgttgc ccgctacttt gggtcctgcg cagccggaca
     4081 gcacgaacac tgcggcggac gcaagcaata acgctacaac acgccgattc atgatcgctc
     4141 ttttgcggta gcaccgacat ttgtactcga ctcaccactg gcaggttaga gagagatgag
     4201 gttccaaaag ggcaaaatcc cggcaaaaaa ggggaaatgc tccttgttat gatcagcgta
     4261 aagtctaatt gcacgctttc caagcatgtg cggtgaggcc gaaactgtct cgacctcacc
     4321 gaccacgcag gctatttgcc gcgggtgaag gtaacgaacc cgtcgcggtt cggcatcacc
     4381 accttgggga gcgattgcgc gtccacggta tcgttctccg ggatcacgcc gttgagattg
     4441 agcaaatagg ccaccacccc atagacctcg tcatttgtga gggacttcgt ttcgttgaat
     4501 ggcatagccc gcctgatgta gtcgaacagg gtcgtggcat agggccaata gctgccgaca
     4561 gtctttatcg gcggcctatc tcccggcagc gagccctgac cgccgaccag gcggtcattc
     4621 ggggtgcccg cccctttttc gccgtgacag gcctggcact tcgccacgaa cacagcttcg
     4681 ccctgcttta cagtaccgct gcccgaaggc aatccggcac cgtcagggcc gatactgatg
     4741 tcccaggagg cgagatcttc aggagagatc gccttgccga ggttagggcc ttgctgagcg
     4801 aagacggtcg acgcgagtgc gaaaatgagc gccggggccg cagcaacgaa aatcctacgc
     4861 gtagacattt ttcacctcgc cattgccggc cacggcccag gattggatca tgttgttgtg
     4921 gtagttgccg cggtcgccgc gcagcgagat gagttgcgaa cggctcggct gaacaaagcc
     4981 cgtttcgtcg gtcgaacggc tctgcagcac cacaggcccg ccgtcccact gccatgccat
     5041 gcgaaaacgc gtcgcggcct tcgacagcac cggctcctgt agcgcggcca ggccccagct
     5101 tttgccgccg tcgcccgaca cctcgacctt ggtgaccttg ccgtagcctg accaggcgag
     5161 accggaaatc tcgtaaaagc ctggccctcg caccgtcagc ccgggtgacg gatgggtgat
     5221 catcgacttc gcctccatgg ggaacacgaa ttgcagcgcc ttcccgggtg gcagcaggat
     5281 ggtgtatttg gaggtctcat ccttggtcat ggtcgggccc tcggtaagct tgatgcgccg
     5341 gagccacttg acgttcatgt tgccctcgaa gccaggcagc agtaggcgga ccggatagcc
     5401 gttggccggc cgtacccgct cgccgttctg gtaaaggcag atcatggcgt cgtcgagcgc
     5461 cttctcgatc gggaaactgc ggctcatgcc ggcggcatcg gcgccttccg ccagcaccca
     5521 cttggctgat ggttcgatac cggcctcctg caacagcacc gagagcttga taccggtcca
     5581 ttccgagcac gataacaggc catgaatagc ctggacgttc gcggctgctg gttctttcgc
     5641 gaacagtgcg ccgctgttgc cggcgcattc caggaatgag atgcgtgatt ccatcgggta
     5701 gcggccgaga tcatcgaggg tgaacaccag tggacgtttc accaggccgt gaatgaccag
     5761 gcgatgggtg tccggactga tatccggaat gccactgtgg ctgcgctcgt agtgcaggcc
     5821 gctcggggtg atcatgccgt tgagcaggtg gtgcggggtg cgcgaggagc cggtgccgcc
     5881 ggtgcccggc gccgacgccc aggtgcgggc gaccttttcc tcgtatttcg aaggctggcc
     5941 gtaaccgttg aacggcgatc ccggaatttt catccatggt tcgaccgcaa gcggcgccgc
     6001 gccggcctga tcgaccatgg ctcccatcgc gatcgcgccg ccggcgagaa acatccgacg
     6061 atgcaaaagc ccgttaccgg ccacctgctc ggtttcggtc caagacgttt ccttcatgct
     6121 caattcctcc ctgcgcatat cgcattgtgg gcattgtaga ccgatccgcc gggcggggaa
     6181 ccggggagat ttcatttttc gcggtgatgc gggttcgccg cgaggcctag ggcggattga
     6241 cgcagagcat tatccgccat ccaaatccaa gagggtgggt tcaaaggaac ccgcccttgt
     6301 atgggggcgc atccttgcgc gtgatgagct gcgtttgcgt cacgatggcg gcgagcttgc
     6361 cgtcgcctcg ggtgatccgg gtctgccaca ccatggtggt gcggccgcgg tggagcggtg
     6421 tgcattctgc ccgcacggta tcgccgcgcg gtaccgcggc aaagaagttg gtcttgctct
     6481 cgattgtggt ggtgccggcg tccttcggca tattcaggaa ggtggcggtg gcgccgagat
     6541 tatcggcgat cgccatgacg acgccgccat gaagcgcccc gttgcggttg gtgagttcct
     6601 ctcgcaccac gaattcggcc actacccggt cgcgcgagac ctcgatgatg tccgtcccca
     6661 tcagacggac gaaagggggc tgcatttcgg cgatcgcctg caggcgggcc gcatcggcgt
     6721 tgtcttcggc gttcaaggcg gtagctccaa ttgagcggat cagcagaatt cggcgagcga
     6781 cgggtcgctg gggcagcttc acgctctcca tctgacggga atttcgacct cagctgccta
     6841 gcgtgtgtct gccgatcgtg gcagattacc gcaacggatc atcctctgcg cccgagatag
     6901 acgttgcgct gtcttttgtc gccggatcgg gaccgcgtcc ctccgcaaat gcgagttctt
     6961 ctatgcgcgc tccccgcaat agtcccggga gggcatagtt gccttcgttg cagcgcggtt
     7021 cgtaataaat tctgttttcc tcatcgctct gcttggtgaa cacttgcatg accgtccatg
     7081 gctgcgtcca cacgctcgga tcctcgatgg tgacgacgta ttcgagcgag gtcggcccga
     7141 tccgtgtcca gcgctcaacc aggtgcaggt tctcgcgcga gccctgaaag tcgttcttcg
     7201 gactgaagtt tgtcacgtcg acgacgaggg tatttccctc ccagtggcca cgcgagtcgc
     7261 cgtaccactg gtggatgttg gcgggcaaat gtgaactccc gtccatgacg atgttgcgct
     7321 gccagccttg gccctgaccc acgtcgtaga acatcgcgat gccgccaggc gtctgcacga
     7381 tccggcggaa gcctccaatc ccgggcaacc cggcggtcaa gcaacggtcc gccaacgtcc
     7441 catcttcagg accatcatgg cgattcatgc gcgcggtgtt gtagcgagga ggaagctctg
     7501 tgcgccgcgg ggagggcgtt ggatcgtact tccccccgtc acaggtcgca tacttgatct
     7561 tgcaagtctc ggtcgcttgc aacaaggcga ggcgaaattc tcgctcaatt gcgttgattt
     7621 tctgagcctc gggcgtcagc ggcggaatcc ggccattggg cggatcgaca atcatcgatg
     7681 tgcgcgtgcc ggtgcgcctg tgggacttga acacgtcatt gtaggaaccg gcaacgtcga
     7741 attcggtccc gcgctccgcg cgcctgtc
//
LOCUS       DATILV010000694        16981 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_419746, whole genome shotgun sequence.
ACCESSION   DATILV010000694 DATILV010000000
VERSION     DATILV010000694.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 16981)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16981)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16981
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_419746"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..412
                     /locus_tag="VLJ17_16430"
     CDS             <1..412
                     /locus_tag="VLJ17_16430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HSV24602.1"
                     /translation="TTTEDVLIVQINPVERREVPTSARDIMNRINEITFNSSLLAEYR
                     AIEFVARLIDQGRLPRGAGTGEYRRVNAHRIVLGDRQKAYTADTKLSTDYDFFRLLHT
                     SGRRAARRFLDAHFDDIGVRSTFDLRAEAQAEWA"
     gene            495..749
                     /locus_tag="VLJ17_16435"
     CDS             495..749
                     /locus_tag="VLJ17_16435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24603.1"
                     /translation="MVADIATLKVDAIVIAAKSCLAAGAAGPDLLAECTLRGGKTGDA
                     KVTSGLCPPVTSSTRSGRCRIAAATRQSSTLCWPPATAPH"
     gene            987..1469
                     /locus_tag="VLJ17_16440"
     CDS             987..1469
                     /locus_tag="VLJ17_16440"
                     /inference="COORDINATES: protein motif:HMM:NF019843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV24604.1"
                     /translation="MRCFVIVIVALLLPGLARAEVADAAFRNGLTAFNEGNYARAQEA
                     WGPLAEAGDARAQTGLGFMYYSGRGVPRDSVRAAAFFQRAAEQGEPTAQLFLALMHFK
                     SDGVPKSAPLAMMWVELALAGGQTEAFHLRGIIMQSMTEAEREEAWRLLARWRQAHRK
                     "
     gene            1706..2398
                     /locus_tag="VLJ17_16445"
     CDS             1706..2398
                     /locus_tag="VLJ17_16445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007757625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HSV24605.1"
                     /translation="MDHYIPPDARILDADVDHKALAAQDPVWVPPPPQLHNLRASRRE
                     FIKGVIASGTAVSAVSYTMGARSAHAQNAAAPERLMAVNVNGQTRRVDVTSNETLAMT
                     LRYKLGLTGTKLGCDRGECGACTVLIDDVPHHSCSTLTHSLRGRKVTTIEGLEGPNGE
                     LHPMQKAFVEELAPQCGFCTPGQIISAVALLKVNPKPTRDEARHAMSGNLCRCGAYDH
                     YLNAVMRAAREA"
     gene            2400..4802
                     /locus_tag="VLJ17_16450"
     CDS             2400..4802
                     /locus_tag="VLJ17_16450"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HSV24606.1"
                     /translation="MAYDLIGKNFTPPDIYGKVTGKAKYAEDFRADGMVFCRLLTSPM
                     PHAKVKRIDTSAALKLKGVLGILTADDVPAFPPPNNPILTNEPLYVGEPILAVAAETE
                     QLAQDAIDLIKIDYEPLPFVVDPLDSLHPAGPTARLDGNVANPRVKFQTIKWTARDFA
                     VAGEGKLPMGKPAEEWTYGDLEAGFKEAKLVLDESFVIGAQGHHCMEPRSAMAYWQNG
                     KVFVFGSSQSQTAVVPGLARYCGVEPKDLVYTAEYCGGGFGSKGNAYPQMAIPAHMSR
                     KINRPVMMRVSRHEEYAIGQGRAGFQGRVRVGFRADGRITALDAFVVAENGANIGFWD
                     FENFGHTLSVVYQPQAMRWQGIPVLTNTPFRGPQRGPGENQTALAMEPILDKAARELG
                     LDRVAIRTINAPDNDAKHGAKRESVSSAYLKEALAKGAARFKWEDKVKLSGQRRGSKV
                     IGVGVGSAFHQAGFNGFDGLVRITPDGKIHIHTGVGNLGTYSYAATSRVAAEVLKCKW
                     ENCIIERGDSRKHLPWNSPQVGSNTTFTQSRTNFVAAMDAKAKLLQIAAKDLGGQPDD
                     FDIGDEKVFLKSDPSKSLTYAAAAQRAIDLGGAFSGKETPEELNPITKASVAGLAGTG
                     LIGVAKDKLKFDAMPPALAAGFVMIELDVETGRWTILEYLGVADCGTVIHPMGLATQV
                     KGGAVMGFGLAATERYVIDSQIGLPANTGFLGQKPMSYLDVPSEMQWDAVDMADPSSP
                     LGSRGIGEPLEGCAAAALVCAIADAMGGHYFNRTPVVPDMIVNAISKRPQSYKALAAN
                     TQ"
     gene            4828..5808
                     /locus_tag="VLJ17_16455"
     CDS             4828..5808
                     /locus_tag="VLJ17_16455"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HSV24607.1"
                     /translation="MMPNFELLQPTKLADALSLLDRRGKDIWKMAGGNDSLDWFKDRV
                     KRPKVVMDLGGIAELKGIRETADGIEIGALTTLSEIANSKVIREKFNVLADAAGRVAS
                     PQIRNASSIGGNVSQDARCWYYRSGLPCYRAGGNSCFADTPGGMNREHAIFDAARCIA
                     VSPSDTAPALVVLEAKMVIKTAKAERVVDAEKFFIGPAVDITHMTVVKPEELLVALRI
                     PNKWSGAKFYFEKVADRNTWDFALVNVASALKVTNGTIDAARVACGGVACTPRFIKVV
                     EDVVKGGKQDEETAELAGKTATHGARPVTYNQFKIPMMENLVKRAIRDAV"
     gene            complement(5900..7744)
                     /locus_tag="VLJ17_16460"
     CDS             complement(5900..7744)
                     /locus_tag="VLJ17_16460"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HSV24608.1"
                     /translation="MTQMRGQLLASVAGLVVVGAMSTALADQLLTGSITSASGQKLEG
                     VLVSAKKEGSTITTSVYTDQNGDYFFPAMADGKYQVWAQTLGFQTAKGALDLNVTKHQ
                     DFKLAAITDPEERIRQMPPEMLAAALPEETEADANIKRIFHNQCTGCHTPGYLLQFKF
                     DEAGWNKIINLMKYIPNYPGPDAKPNAIIAFNQKELAAYLARARGPGESSMKLKDRPR
                     PTGEAARVTWTTYDLPLNPDVGVGTLVKYNPNDGSDWSLGSTSRMGQLPHDGGMGLDG
                     NLYYTVNAPNKVVTVGKVDGKTGEVKYLKVDKRDGSSASTAHGLTRDANGDFWFDINP
                     GRRSLGKLETKTEKISVYETPPPMSPLGGAVTMDVDGKGKIWASAPDGVVQFDPVTEK
                     FTDFKSKLAFKNAKGTNSTYGAAGDRDGNGWWAQMAFDTIGKADMTTRTTSEVALPSL
                     KDEMERIPAAAKAFYDGFSDRTNGNPLPWSQGPRRMGTDKNADVLWVGNSWGATLARI
                     DTKTLQTSIIPFPDPSYQPYHIAVDDSHNVWANMWTTDRIARYNPGKGEWTMFDLPTR
                     GTEIRHISLLERDGVTKVIVPIYRDSKMGAMTLRSEAEIAALKAQVSR"
     gene            complement(7964..8257)
                     /locus_tag="VLJ17_16465"
     CDS             complement(7964..8257)
                     /locus_tag="VLJ17_16465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HSV24609.1"
                     /translation="MHLSNESLLIILAVGLIAGWLAGQVMRGSGFGLIGDLIVGLLGA
                     LIGDWLLPQLNIHLGTGIVALIINALIGAIVLLLILRVIGGGGWGYRRWRRHW"
     gene            complement(8520..10370)
                     /locus_tag="VLJ17_16470"
     CDS             complement(8520..10370)
                     /locus_tag="VLJ17_16470"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HSV24610.1"
                     /translation="MTHMRGQLLASVASLVLIGASTASADQLLTGSISSASGQKLEGV
                     QVSAKKEGSTITTSVYTDLNGEYFFPAMADGKYRVWAQALGFETSKGEVELIATKHQD
                     FKLTAITDPEQKIKQMPSEMLAAALPDETEADAQMKRIFHNQCTGCHTPGYPLQFKFD
                     EAGWNKIINLMKVVANTGEYLGPNQKPNGIIEFNRKELAAYLARARGPGESSMKFKDR
                     PRPSGENARVVWQTYDLPLNPTTGIGAQGVKYPVNDGYDWNLGTPSKLGQLPHDGAMG
                     FDGNLYYTVNNPNPGVTVGKVDTKTGEVKYLKVERKDGKFASTAHGLTRDANGDLWFD
                     VNPGRRSLGKLEVKTEKISVFATPEPMSPLGGAVTLDVDGKGRVWASAPDGVVAFDPA
                     TEKFTDFKSILPFKNAKGTNSTYGAAGDRDGNGWWAQMAFDTIGKADMTTGKTTEITL
                     PSLKDEMARLPEAKRAFYENFADRTNGNPLPWAQGPRRMGTDKNADVLWVGNSWGATL
                     ARIDTKTGQSTIIPFPDPAYQPYHIAVDQNHNVWGNLWTADRLAKYDPAKAEWTLFDL
                     PVRGTEIRHISLLEKDGVTKVIVPVYRDSMMGVMTLRSEADLAALKTAAK"
     gene            10818..11282
                     /locus_tag="VLJ17_16475"
     CDS             10818..11282
                     /locus_tag="VLJ17_16475"
                     /inference="COORDINATES: protein motif:HMM:NF041384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YHS domain-containing (seleno)protein"
                     /protein_id="HSV24611.1"
                     /translation="MPRIARRQFFVAMLSTAAIVSGAQFSEADTRPAGRRTALSGYDP
                     VSYFTDGQPEKGSDAFWYAFDDAIYLFRNAEHQALFAADPERYAPRYAGFCAGGVSKG
                     YKTEPDPEAWMIVSGRLFVFQFKERVADFKRDLSFIEKADVNWPGLRDAPIR"
     gene            complement(11289..13037)
                     /locus_tag="VLJ17_16480"
     CDS             complement(11289..13037)
                     /locus_tag="VLJ17_16480"
                     /inference="COORDINATES: protein motif:HMM:NF024821.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV24612.1"
                     /translation="MLGQKILQFHGFTLDPNTASLCSGGQQSQLRPKSFDVLLYLARH
                     PGRIITKDELIAAIWPNVFVTENSLVQCISDIRVALNDDAQAILKTIARRGYLFAAPI
                     VEIETTAEHWPVSGRNEAPQPSPIGTSDASAGGIRAAGVASLWRHRYSALVFFCVACA
                     AVAGAISWSLWPATDRSVSTADTDVSASAPRSKRISIAFLPLATPGAPSQDEYFADGL
                     TEDIIAALGRFSELSVLSPKVVMGYKGGTARPDDLGRNLKVRYIAEGSLRRSPERVRI
                     SVRLTDASLGNLLWADHYDAEPANIFAIQDNITRQITGALAVRLGNAEQARVAAKPPS
                     SLEAYDLVLRGRDFLSRLNRSATSNARTMFERAIELDPNYAAAYIGLGRVDLTAVALG
                     WTPDPAGALRRAESLARKSIGIDEFNPAAHVLLGRTYARLGEYDRALDALKRAMAQNP
                     SDPDTYAGLGDSLLWSGDIEAAIQTLETAEQLDPKLSTEDLFNLGAAYFLVGRNQEAV
                     RRFERTIARNDSTAFIHAMLAAIHAEAGRQDELARERAELRRLDPFFDLTTFGSLFRN
                     PEHRKKIVSALRQAGF"
     gene            13185..14441
                     /locus_tag="VLJ17_16485"
     CDS             13185..14441
                     /locus_tag="VLJ17_16485"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vanadium-dependent haloperoxidase"
                     /protein_id="HSV24613.1"
                     /translation="MLSSKSFMPGPAFPLLTVLATLAAPARAELISDWNAKAEAIAIE
                     KRLLPPPNAHGMAILHVAIFEAVNAIDQRFGPYWFKLTADRDISKEAAAASAGHRVLV
                     ALHPDQKASLDSTLKASLAAIADGDAKAKGIELGAKAAAEILAQRANDGAEAPESYRP
                     YTVPGVYVPTVVPVSSTYGSVKPWVMEKGPQFRPAAPPALDSETWTKDVNEIREIGGL
                     NSARRTELQTNIARFWFVTGPQAWNPIVRQLVAAKKLDLVDSARLFALVAMATDDAFI
                     AVFDAKYAYNFWRPITAIRNADLTRNTATPRDPSWRPLGDTPMHPEFPCAHCITSSAA
                     GAVLKSVFGDEIPEVSMTSPTAPGVTRKWTRIQDYIDEVSAARIYAGFHYRFSTRIGE
                     EMGRQIGDMTVATQLRPANVESGLPR"
     gene            complement(14538..14921)
                     /locus_tag="VLJ17_16490"
     CDS             complement(14538..14921)
                     /locus_tag="VLJ17_16490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008567285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HSV24614.1"
                     /translation="MDKARFDKGLEVRTAVLGKDYVEASMKNADDFNRPFQELVTEYC
                     WGAAWGSDGLSRKTRSMLNIAMISILNRPHELKLHVKGALRNGVTKDEIREVMTQVAI
                     YAGVPCGVDAFRLAREAFKEMEAGA"
     gene            15079..16266
                     /locus_tag="VLJ17_16495"
     CDS             15079..16266
                     /locus_tag="VLJ17_16495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HSV24615.1"
                     /translation="MIHNDSSVAVIGGGIGGLAAALCLLKAGFDVHVYEQAKALGEIG
                     AGINIGPNASRILHRLGISDVLAKTGVKPLRFDQRRWDDGRYLLRSPLGEVVETAFGA
                     PYYTFHRADLHRALADAIPPDRVHLAHQFTNLIDHGDRVEAHFENGTSISAAALIGAD
                     GIHSAVRHALFGPEKPRFTGCVAYRGLVPSNRLAHLRLELTTQIWMGPGRHFVHYFVS
                     AGRLVNFVAITEENSWMRESWVDRGEVADVLAAFSGWHSQVLSIIESADEAYKWALFD
                     RAPLPRWSVDRVTLLGDSCHPMLPFMGQGAGQAIEDAATLKGCLLKLSGDVPAALRLY
                     ERLRLPRASRLQGMSETNKSRFHLPDGPVQKKRDVEMASGATDWSLAAIAWLYEHDAE
                     VVD"
     gene            16448..>16981
                     /locus_tag="VLJ17_16500"
     CDS             16448..>16981
                     /locus_tag="VLJ17_16500"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HSV24616.1"
                     /translation="MGYETIDVAPVTPRIGAHVDGVTLSKPLSNRQVEDLHHALAEHQ
                     VLFFRDQPLDVEAHKRFGRYFGELHVHPSTPGPEGHPEILPIHADANSKRIAGEYWHS
                     DVSCDEEPPMGSILYPHTVPDCGGDTLFASQYAAYEALSPQMKIYLEGMTATHSGDHV
                     YRRNNALMGRAETGKVYP"
BASE COUNT         3196 a         5176 c         5250 g         3359 t
ORIGIN      
        1 taccacgact gaagacgtgc taatcgtcca gattaacccg gtcgagcgcc gcgaggtccc
       61 gacttcggcg cgcgatatca tgaatcgcat caacgagatc accttcaact cctcgctgct
      121 tgccgaatac cgcgcgatcg aattcgtcgc ccgattgatc gaccagggcc ggttgccgcg
      181 cggcgccggg accggggaat atcgccgcgt caacgcccac cgtatcgtgc tcggtgatcg
      241 gcaaaaggcg tatacggccg ataccaagct ttccaccgat tacgatttct tccgtttgct
      301 ccataccagc ggccgccgcg ctgcgcgccg cttcctcgac gcgcatttcg acgatatcgg
      361 ggtgcgcagc accttcgact tgcgcgccga ggcgcaggcg gaatgggcgt gacgttggag
      421 gctagaggaa cgcgccatgc cgctgccgat cactgtgcac tctgttagcc catggcggcg
      481 cccaacgcga aatcgtggtc gccgacatcg cgacgcttaa ggtcgacgcc attgtcatcg
      541 cggccaagag ctgcttggcg gcgggggcgg ccggacccga cttgctggcg gaatgcacgc
      601 ttcgtggcgg caagaccggc gacgccaagg tcaccagcgg cctctgcccg cccgtcacat
      661 catccacgcg gtcgggccgg tgtagaatag ccgcagcgac gagacaaagc tcgacgctct
      721 gctggcctcc tgctaccgca ccgcactagc gcttgccgtt gagcaccgcc tcgatcgctt
      781 ttccagccat ctcgaccggc cgcgatccgt tttccacctg accgcgctgc gcgcgtcgcg
      841 gttgggttgc aggggttgga tgcggcgatc agtttgcagc ccgtgttctg ctgcttcagc
      901 cgcaacgccg cgcgccacta cgaggttctg agcgctcggg ttggctgcta tcgcgtattc
      961 gggtccgatc tgttaacctc tgatgaatgc ggtgctttgt tatcgtgatc gtcgcgctct
     1021 tgctgcctgg tttggctcgc gccgaagtcg cggatgcggc tttccgcaac ggactgacag
     1081 cgttcaacga agggaactac gcgcgcgccc aggaggcctg gggtccgctc gcagaggccg
     1141 gcgacgcgcg ggcgcagacg ggacttgggt tcatgtacta ttccggccgc ggcgtgccgc
     1201 gcgacagcgt acgtgcagct gctttctttc agcgtgcagc cgagcagggt gagcccaccg
     1261 cacaactttt cctcgcattg atgcatttca aatcggatgg cgtgccgaag agcgcgccgc
     1321 ttgccatgat gtgggtggaa ctcgccctcg cgggaggtca gacggaggcc ttccacctgc
     1381 gcgggatcat catgcaatcg atgaccgagg ccgagcgcga ggaggcgtgg cgcctgctgg
     1441 cgcggtggcg ccaagcacat cggaagtgag ggtgggagcg cggacgtttc gtcggctctt
     1501 tgccgcaaga aggtggggga cgcccgcgct ccgagcgact gatttcagtg gaagatatcc
     1561 gttcattcca ttgggaaagt gtcgattact ccagaattgc cgacatccag ctatcgtgct
     1621 taaatccggt caatcgagaa aagccaggac ggctcccgtg gcatgcgcag tcatgcccgg
     1681 ccaaagtttc acatagggag ggctcatgga ccactatatc ccgccggatg cccgcattct
     1741 tgatgcggat gtagatcata aggcgttggc cgcgcaggat cccgtctggg tgccgccacc
     1801 gccgcagctc cacaatctgc gcgccagccg ccgcgaattc atcaaggggg tgatcgcctc
     1861 cggcacggcc gtatccgcgg tttcctacac catgggcgct cgtagcgcgc acgcgcagaa
     1921 cgcggcggcg cccgaacgcc ttatggcggt caacgtcaac ggccagacac gccgggtcga
     1981 cgtcacgtca aacgagacac tggcgatgac gctgcgctac aagctcggtc tcaccggcac
     2041 caagctgggt tgcgatcgcg gcgagtgtgg cgcatgcacg gtactgatcg acgatgtacc
     2101 gcaccattcc tgctcgacgc tgacgcattc gctgcgtggc cgcaaagtca cgaccatcga
     2161 aggcttggag ggcccgaatg gcgagctgca cccgatgcag aaggccttcg tcgaggaact
     2221 cgcgccgcaa tgcggcttct gcacgcccgg ccagatcatc tcggcggtcg ccttgctcaa
     2281 ggtgaacccc aaaccgacgc gcgacgaggc tcgccatgcg atgtctggca atctctgccg
     2341 ctgcggcgcc tatgaccatt atctcaatgc ggtgatgcgc gccgcccggg aggcgtaaca
     2401 tggcatacga cctgatcggc aaaaatttca cgccgccgga catttatggc aaggttaccg
     2461 gcaaggccaa atacgcggag gattttcgcg ccgacggcat ggtgttctgc cgcttgctca
     2521 caagtccgat gccgcatgcc aaggtgaaga ggattgacac ctcggccgcg ctcaagctca
     2581 agggcgtgct gggcatcctc accgccgacg acgtgccggc atttccaccg cccaacaatc
     2641 ccatcctcac caacgagccg ctttatgtcg gcgagccgat cctcgcggtc gcggccgaga
     2701 cggaacagct cgcccaggat gcgatcgacc tcatcaagat cgattatgaa cctttgccgt
     2761 tcgtagtcga tccgctcgac agcctgcatc cggccggccc gacggcgcgg ctcgacggca
     2821 atgtcgcgaa tcccagggtc aagttccaga ccattaaatg gacggcacgg gatttcgccg
     2881 tcgcgggcga gggcaagctg ccgatgggca agcccgccga ggaatggacc tatggtgatc
     2941 tcgaagccgg tttcaaggaa gccaagctag tgctcgacga gagcttcgtg attggcgccc
     3001 aaggccacca ttgcatggag ccgcgttccg ccatggcgta ctggcagaac ggtaaggtct
     3061 tcgtgttcgg ctcctcgcag agtcagaccg ccgtggtgcc cggcctcgcg cgctattgcg
     3121 gggtagagcc gaaggacctt gtctacactg cggagtattg cggcggtggg ttcggctcca
     3181 agggcaacgc ctatccgcag atggcgatcc cggcgcacat gtcgcgcaag atcaaccgtc
     3241 ccgtgatgat gcgggtgagc cggcatgagg agtatgcgat cggccagggc cgcgctggat
     3301 tccaggggcg cgtcagggtc ggtttccgcg ccgatggccg gataacggct ttggacgcgt
     3361 tcgtggtggc cgagaacggc gccaatatcg gcttctggga tttcgagaat tttggccaca
     3421 cgctgtcggt cgtctatcag ccgcaggcga tgcgctggca aggcattccg gtcctcacca
     3481 acacgccgtt ccgtggaccg caacgcggcc ccggtgaaaa ccagaccgcg ctcgctatgg
     3541 agccgatcct cgacaaggca gcccgtgagc tcggtctcga tcgcgttgca atccgcacca
     3601 tcaacgcgcc cgacaacgat gccaagcatg gagccaagcg cgaatccgtg tccagcgcct
     3661 acctcaagga agcactggcg aagggtgcgg cccgcttcaa gtgggaagac aaggtcaagc
     3721 tctccggcca gcgccgcggc tccaaggtga ttggcgtcgg cgtcggctcg gcgttccacc
     3781 aggccggatt caacggcttc gacggtctgg tgcgaatcac gccggatggc aagatccaca
     3841 tccataccgg cgtcggcaat ctcggtacct attcctatgc ggcgacttcg cgcgtcgctg
     3901 ccgaggtgct caagtgcaag tgggagaact gcatcatcga gcgtggcgat agccgcaagc
     3961 atctgccgtg gaattcgccc caggtcggca gtaacaccac ctttacccag tcgcgcacca
     4021 acttcgtcgc ggccatggat gccaaagcga aactcctgca gatcgccgca aaggatctgg
     4081 gcggccagcc agacgatttc gacattggag acgagaaggt cttcctcaag tccgatccgt
     4141 cgaaatcgct cacttacgcg gctgccgcgc agcgggcgat cgatctcggc ggagcgttca
     4201 gcggcaagga gacgccggag gaactcaacc cgattaccaa agcctcggtt gcgggcctcg
     4261 ccgggaccgg gctgatcggt gttgccaagg acaagcttaa gttcgacgcc atgccgccgg
     4321 cgctggcggc cggcttcgtc atgatcgagc tcgatgtgga gaccggtcga tggaccatcc
     4381 tggaatatct cggcgtcgcc gattgcggca ccgtgattca tcccatgggg ctcgccacgc
     4441 aggtgaaagg cggcgccgtg atgggcttcg gcctcgccgc caccgaacgt tatgtgatcg
     4501 attcgcaaat cggacttccg gccaacaccg ggttcctggg gcaaaagccg atgagctatc
     4561 tcgacgtgcc ctccgagatg caatgggacg ccgtcgacat ggccgacccg agctcgcctt
     4621 tgggctcacg cgggatcggc gagccgttgg agggctgcgc cgccgcagcg ctcgtttgtg
     4681 cgatcgccga tgccatgggc ggacattatt tcaaccgcac gccggtggta ccggacatga
     4741 tcgtgaacgc catctccaag cgcccgcagt cctacaaggc gcttgccgcc aatacgcagt
     4801 gaggggaatg cagccatgat ccgggatatg atgccgaatt tcgagctgct gcagccgacc
     4861 aagctcgcgg acgctctctc gctactcgat cgccgcggca aggacatctg gaagatggcc
     4921 ggcggcaatg acagcctcga ctggtttaag gaccgcgtga agcggcccaa ggtcgtgatg
     4981 gatctggggg gcatcgcgga gctcaagggt atccgcgaga cggccgacgg gatcgaaatc
     5041 ggtgcgctca ccacactatc ggaaatcgcc aacagcaaag tgatccgcga aaagttcaac
     5101 gtgcttgccg atgcggccgg cagggtggca agcccgcaaa tcaggaacgc gtcgtcgatc
     5161 ggcggcaacg tctcccaaga cgcacgctgt tggtactacc gctctggtct gccctgctac
     5221 cgcgcgggcg gcaacagctg tttcgccgat acgccgggcg gcatgaatcg tgagcacgcg
     5281 atcttcgacg ccgcccgttg cattgcggta agcccatcgg acaccgcccc ggcgctggtc
     5341 gtgctcgagg ccaagatggt gatcaagacc gcaaaagctg agcgcgtggt cgatgccgag
     5401 aagttcttca tcggcccggc ggtcgacatc acccatatga cggtggtgaa accggaggag
     5461 ctcctggttg cgctgcgtat tcccaacaaa tggtccggcg cgaagttcta tttcgagaag
     5521 gtcgccgacc gcaacacatg ggacttcgcc ctggtcaacg tcgcctccgc cctgaaggtc
     5581 acgaacggca ccatcgatgc ggcgcgggtg gcgtgcggtg gggtggcttg cacgccgcgc
     5641 ttcatcaagg tcgtggagga tgtggtgaaa ggcggcaagc aggatgagga gaccgccgaa
     5701 ctggccggca agaccgcgac ccatggcgcg cgtccggtga cgtataacca gttcaagatt
     5761 cccatgatgg agaatctggt gaagcgggcg atccgggacg cggtgtaggt tctgcaagcc
     5821 tctcgcgcaa gggagaggtg aaataatccg agccctgtcg ccagggctcg gcacgttcac
     5881 cgacagacgc ctgtgcgcct cagcgagaaa cctgcgcctt aagcgccgcg atctcggctt
     5941 cgctgcgcaa cgtcatggcg cccatcttgc tgtcgcgata gatcggcacg atcaccttcg
     6001 tcacgccgtc gcgctccaag agcgagatgt ggcggatttc tgtgccgcgc gtcggcaggt
     6061 cgaacatggt ccattcgccc ttgccgggat tgtatctggc gatccgatcc gtcgtccaca
     6121 tattggccca cacgttgtga ctgtcgtcca ccgcgatgtg gtacggctga tatgacggat
     6181 ccgggaacgg gatgatggat gtctgcaacg tcttggtgtc gatccttgcg agcgttgcgc
     6241 cccaggaatt gccgacccac aaaacatcgg cgttcttatc cgtgcccatg cggcgcgggc
     6301 cttgcgacca cggcaacggg ttgccgttgg tgcggtcgct aaagccgtca tagaatgcct
     6361 tggcggctgc aggaatgcgc tccatctcgt ccttgagcga gggcagcgcg acttccgagg
     6421 tcgtgcgggt ggtcatgtcg gccttgccga tggtgtcgaa cgccatctgg gcccaccagc
     6481 cgttgccgtc gcggtcaccg gcggcgccgt aagtgctgtt ggtgcccttg gcgttcttga
     6541 acgccagctt cgacttgaag tcggtgaact tctcggtcac tgggtcaaat tgcacgaccc
     6601 catccggcgc cgacgcccag atcttgccct tgccgtcgac atccatggtg acggcgccgc
     6661 caagcggcga catgggcgga ggcgtttcgt agacgctgat cttctcggtc ttggtctcaa
     6721 gcttgccgag gctacggcgg cccggattga tgtcgaacca gaagtcgcca ttggcgtcgc
     6781 gggtgaggcc atgggcggtc gaagcggacg agccgtctcg cttgtcgacc ttaaggtatt
     6841 tgacctcgcc ggtcttgcca tcgaccttgc cgaccgtgac caccttattg ggggcgttga
     6901 cggtgtaata aaggttgccg tcgagaccca tgccgccgtc atggggcaat tgacccattc
     6961 tcgatgtgct gccgaggctc caatcggagc cgtcattcgg gttgtatttg accaaggttc
     7021 cgaccccgac gtcaggattg agtgggaggt cataggtggt ccacgtcacc cgtgcggctt
     7081 cgccggtcgg ccgcggacgg tccttgagct tcatcgagct ttcgcccggt ccgcgtgcgc
     7141 gggcgaggta agctgcgagt tccttctgat tgaaggcgat gatggcgttc ggcttagcgt
     7201 cggggcccgg atagttggga atatacttca tcagattaat gatcttgttc cacccggcct
     7261 cgtcgaactt gaattgcaac aggtaccccg gcgtatgaca gccagtgcac tggttgtgga
     7321 agatgcgctt gatgttggca tcggcctcgg tttcctccgg caaggctgca gcgagcatct
     7381 cgggtggcat ctggcgaatg cgctcttctg gatcggtgat cgccgcgagc ttgaagtcct
     7441 gatgcttggt gacgttcaga tcgagggcgc ccttggcggt ctggaagccg agggtctgcg
     7501 cccacacctg gtattttccg tccgccatgg cggggaagaa atagtcgccg ttctggtccg
     7561 tgtagacgct ggtcgtaatg gtcgagccct ctttcttggc cgaaaccagc acgccttcga
     7621 gtttctggcc ggaagctgac gtgatcgagc cggtcagcaa ctggtcggcc aaagcggtgc
     7681 tcatggctcc gaccacgaca agaccggcaa cgctagccaa tagttgacct cgcatttggg
     7741 tcatgatgtt ccctccttgg gtagctcgcg gcgtatgggt gcgcccgagc gatctactcg
     7801 gcgattttca ataaacgcca attgcgcgac gtgctgctat ttgctttttt gtgtgccgct
     7861 gggcggatgc gctgccgccg tgctggtgag agtaagccag cgccggccgc atgggaaggg
     7921 ccgcagcgcg gaaactcggg gctaattgta aggtttgccg gcgctaccag tgtctgcgcc
     7981 aacgcctata gccccagcca cctccgccaa tgacacgcag gataagcagc aagacgattg
     8041 cgcctatcag cgcgttgata atcagagcaa caatgcccgt gccgagatgg atgtttagct
     8101 gcggcaacag ccaatcgccg atgagcgcgc ccagcaaacc gacgatcaaa tcccctataa
     8161 gcccaaaccc cgaacctcgc atcacctgtc cggctagcca gccggcaatg agcccaacgg
     8221 cgaggatgat caggaggctc tcatttgaca gatgcatggt gtcgtcccca cgtgagcggc
     8281 cgctcgtgat cgaagcgtga gacaacgcct ttcggcaaat aaagttccat tagatatcgt
     8341 caaccgttca gagcctcatg ctagggaaac atgggctaga ccagaacgca cgtgtaggtg
     8401 tccgcgatga caacgcggtc actctgatca gtcgcagccc cacacgcgca aaaaaccgag
     8461 ccctgtcccc agggctcggc cagatttcac cccgatggtg agcgtctcgc gactgcccct
     8521 tacttcgcag ccgtcttgag cgccgcgagg tctgcctcgc tgcgcagcgt catgacgccc
     8581 atcatgctgt cgcggtagac cggcacgatc accttggtca cgccatcctt ctccaagagc
     8641 gagatgtggc ggatttcggt gccgcgcacc ggcaggtcga acagcgtcca ttcggccttg
     8701 gcgggatcgt acttggcgag ccggtcggcg gtccacaggt taccccacac attgtggttt
     8761 tgatcgaccg cgatgtgata cggctgatag gccggatccg ggaacggaat gatggtcgac
     8821 tgcccggtct tggtatcgat gcgggccagc gtggcgcccc aggaattgcc gacccacagc
     8881 acgtcggcat tcttatccgt gcccattcgg cgcgggccct gcgcccacgg caatggattg
     8941 ccgttggtgc ggtcggcgaa gttctcatag aaggcgcgct tggcttccgg caggcgcgcc
     9001 atttcgtctt tcagcgacgg cagtgtgatt tccgtggtct tgccggtggt catgtcggcc
     9061 ttgccgatgg tgtcgaacgc catctgggcc caccagccgt tgccgtcgcg gtcgccggcg
     9121 gcgccgtagg tgctgttggt gcccttggcg ttcttgaacg gcaggattga cttgaagtcg
     9181 gtgaacttct cggtcgccgg gtcgaaggcg acaacgccgt ccggcgccga agcccacacg
     9241 cggcccttgc cgtcgacatc gagagtcacg gcaccgccga gcggcgacat cggctccggc
     9301 gtcgcaaaga cgctgatctt ctcggtcttc acctcgagct tgccgaggct gcggcggcct
     9361 ggattgacgt cgaaccaaag atcgccattg gcatcgcggg tgaggccgtg agccgtggag
     9421 gcgaatttgc cgtccttgcg ctcaaccttg aggtacttca cttcgccggt cttggtgtcg
     9481 accttgccga cggtgacgcc ggggttcggg ttgttgacgg tgtaatagag gttgccatca
     9541 aaacccatgg cgccgtcatg gggcaactgg ccaagcttgg acggcgtgcc gaggttccag
     9601 tcataaccgt cattgaccgg gtatttcacg ccctgggcgc cgatgccggt ggtggggttg
     9661 agcggcaggt cgtaggtttg ccagaccacg cgggcatttt caccgctggg ccgcggccgg
     9721 tctttgaact tcatcgagct ttcgcccggc ccgcgtgcac gggccagata agctgccaac
     9781 tctttgcggt tgaattcgat gatgccgttc ggcttttgat tcgggcccag atattcgccg
     9841 gtgttggcga cgaccttcat caggttgatg atcttgttcc acccggcttc gtcgaacttg
     9901 aactgcaacg gataacccgg cgtgtggcag ccggtgcact ggttgtggaa aatacgcttc
     9961 atctgcgcgt cggcctcagt ttcatcaggc aacgccgcag cgagcatttc cgacggcatc
    10021 tgcttgatct tctgctcggg atcggtgatc gccgtgagct tgaaatcttg atgcttggtg
    10081 gcgatcaact cgacctcgcc tttggaggtc tcgaagccca aggcctgcgc ccacacgcga
    10141 tatttgccgt cggccatggc ggggaagaag tactcgccgt tcaggtctgt gtagacgctg
    10201 gtggtgatgg tcgagccctc cttcttggcg gagacctgca caccttccag cttctggccc
    10261 gaagccgagc tgatcgagcc cgtcaacaac tggtcggccg aagcggtgct cgctccgatc
    10321 aggacaagac tcgcaacgct agccaacagc tggcctcgca tatgtgtcat ggtgtttctc
    10381 tcctttgcac ggttgctcgc tgcgcatcgg ggcgcttgcg cctggcacag acaacagacg
    10441 ccgagcgccg cgaccggccg atacggagtt ccctctgcat gaatcgtatg ggtattaacg
    10501 cggttctcaa aatgagcccg ggccaagtgg tggcatccat gaagctcgcc cgagccgaac
    10561 cgcaagtttt gttcgaatag ctgtaacgca gcaatcctct ctgccgataa gcgtacgctt
    10621 gagaacgctg caagggaagg gccttcaaga cgaaactctc atattaccgg cttgcagaaa
    10681 cccggttcga tgcacttttc gcgggtgcga tcaggaccgc ggcagcaacc ctgccaacgg
    10741 tgcgcttgcg acaggttgat gccgggaccg tgattctgta gtatttgctt aacaattcca
    10801 tcaaccggag ccatctaatg ccgaggatcg cgcggaggca gttttttgtc gcgatgttga
    10861 gcaccgccgc catcgtctcg ggcgcgcaat ttagcgaagc tgacacccgc cccgctggaa
    10921 ggcgcaccgc attgagcggc tacgatccgg tgtcctattt cacagatggc caaccggaaa
    10981 agggatctga cgcgttctgg tacgcgtttg atgatgccat ctatctattc cgaaatgcgg
    11041 aacatcaggc gctgtttgca gccgacccgg agcggtacgc gccgcgatat gccggctttt
    11101 gcgccggcgg tgtctccaag ggctacaaga ctgaaccgga tccggaagct tggatgatcg
    11161 taagcggcag gctgttcgtg tttcagttca aggagagagt cgcggatttc aaacgcgatc
    11221 tctctttcat cgaaaaggcc gacgtcaact ggccgggact acgtgacgct cccatacgct
    11281 agcgcgggtc aaaatcctgc ttgacgcaat gccgagacaa tcttcttccg atgctccgga
    11341 ttgcggaaca gcgacccgaa ggtcgtgagg tcgaaaaaag gatcgagacg ccgcagttct
    11401 gcgcgttcgc gggctaattc gtcttggcgt cccgcctcgg cgtggattgc cgccagcatt
    11461 gcatgaatga aagccgtgct gtcgttacgg gcgatcgtcc gctcgaacct ccgaaccgct
    11521 tcttggtttc ggccgacaag aaaatatgca gcgcccagat tgaagaggtc ctcggtcgag
    11581 agcttggggt ccaattgctc tgcagtttca agagtctgga ttgctgcttc gatatcgcca
    11641 ctccagagca gagagtcgcc gagacccgca taggtgtcgg ggtcgctggg gttctgcgcc
    11701 attgcgcgct tgagcgcatc gagcgcccga tcatattcgc caaggcgagc ataagtgcgg
    11761 ccgagcaaga cgtgagccgc agggttgaac tcgtcgatgc cgatcgattt ccgggcaagg
    11821 ctttcggccc gccgcaaggc gccagcggga tcaggggtcc acccaagcgc gacggcggtc
    11881 aaatcgactc ggcccaatcc gatgtaggca gccgcatagt tgggatcgag ttcgatcgct
    11941 cgctcgaaca tggtgcgtgc attggaggtc gccgagcggt tcagccggga gagaaaatcg
    12001 cgtccgcgca gaacgaggtc ataggcttcg agactgctgg gaggcttcgc cgcgacccgt
    12061 gcttgctcgg cattacctaa gcggaccgcg agcgctccgg taatctggcg cgtgatgttg
    12121 tcctggatgg cgaatatatt tgccggctca gcgtcgtagt ggtctgccca cagcagattt
    12181 ccaagcgacg catccgtgag ccggaccgag atgcggacgc gctcggggct gcgccgtaag
    12241 cttccctcgg cgatgtatct cactttgagg ttgcggccga gatcatcggg ccgtgccgtg
    12301 ccgcccttgt accccatcac cacctttgga gagaggacgg acaattcaga aaagcgaccg
    12361 agagccgcaa tgatgtcctc ggtcaaccca tcggcaaagt attcgtcttg tgaaggcgcg
    12421 ccaggggtgg caagcggcaa aaaagcgatc gagatccgtt tggagcgcgg cgccgaagcc
    12481 gacacgtcgg tatcagcggt cgacacggac ctgtccgtgg ctggccacag cgaccacgat
    12541 atcgcaccgg ccaccgcggc acaggccacg cagaagaaaa ccagcgccga atacctatgg
    12601 cgccacagcg aagccacgcc ggctgcgcga atcccccctg cggaagcgtc cgaggtcccg
    12661 atcggggagg gttgcggcgc ctcgtttctt ccggaaaccg gccaatgctc cgccgtagtc
    12721 tcaatctcga caataggtgc ggcaaaaaga tagccgcgcc gcgcaatcgt tttcaggatc
    12781 gcctgcgcat cgtcattgag agcaacccgg atatcgctga tgcactgcac cagcgaattt
    12841 tccgtgacga atacgttagg ccatatggct gcgatcaatt cgtccttcgt tataattcgc
    12901 cccggatgcc gtgcgaggta aagcaggacg tcgaaagatt tgggacgcaa ctgggattgt
    12961 tggccgcctg agcacaggct cgcggtgttc ggatcgagcg tgaagccgtg aaactgaagg
    13021 atcttttgcc cgagcattgg cataccgcat tggatcggcc ccaatttagc tgaaaattca
    13081 aggggtgtcg ccgatatcag tgatctttca gcgatctttc acgacgaggc gaggcgttgc
    13141 ggctatccgt gctgccgtaa agctgctctc gaatggaggc ttacatgctt tcctcaaagt
    13201 cttttatgcc gggtccggca ttccctctgc tcacggtcct tgccaccctt gcggcgccag
    13261 cccgcgccga gttgatttct gactggaatg ccaaggcgga ggcgatcgcc atcgaaaagc
    13321 gactgcttcc ccctccgaac gctcatggta tggcgattct ccatgtcgcg atcttcgaag
    13381 ccgtaaacgc cattgaccag cgatttggtc catactggtt caagctcacc gccgaccggg
    13441 atatctcgaa ggaggctgcc gcagcgtccg cgggccatcg tgtgctcgtc gccctccatc
    13501 ccgaccagaa agcgagcctc gattccacct tgaaggcttc gttggctgca atcgccgatg
    13561 gagacgccaa ggccaaggga attgaactcg gcgcgaaggc ggctgccgaa atcctcgccc
    13621 aacgcgccaa tgatggtgcc gaggctccgg aaagctaccg gccttacacg gttcccggcg
    13681 tgtacgttcc gacggtcgtc cccgtcagtt cgacctacgg gtcggtcaag ccgtgggtga
    13741 tggaaaaagg acctcagttc cggccggccg cgccgccggc gctcgattcc gaaacctgga
    13801 ccaaggatgt caacgagatc agggaaatcg gagggctgaa cagcgcaagg cggaccgagc
    13861 tgcagacgaa catcgcgcgc ttctggttcg tcaccggccc gcaggcctgg aacccaatcg
    13921 taagacagct cgttgctgca aagaagttgg accttgtcga cagcgcccgg ttatttgccc
    13981 tcgtggcgat ggcgaccgac gacgccttca ttgcagtatt tgacgcaaaa tacgcctaca
    14041 acttctggcg tcccatcacc gccatccgca acgccgatct gacccgcaac acggccactc
    14101 cgcgcgaccc gtcgtggcga ccgcttggag acaccccgat gcatccggag tttccatgcg
    14161 cccattgcat cacgtcatca gcggccggcg cagtgctcaa gagtgtgttc ggcgacgaaa
    14221 ttccggaggt gtcgatgacg agccccacgg ctcccggagt gacgcgaaag tggacgcgga
    14281 ttcaagacta catcgacgaa gtttccgcgg cccgaattta tgccggcttt cactaccgct
    14341 tctcgaccag gatcggcgag gagatgggcc gacagatcgg cgacatgact gtcgccaccc
    14401 aactgcgccc cgccaatgtg gaatcggggc tcccgcgctg acgatgagga cccgcgcggg
    14461 aaccccgcac gggctgcagg attttgcttc cttgtgaagg caggcgctga gcttcggttg
    14521 cgattgcccg acgcccgtca ggcgcccgcc tccatttcct tgaacgcttc gcgggcgaga
    14581 cggaacgcgt cgacaccgca cgggacaccg gcatagatcg cgacctgggt catcacttcg
    14641 cgaatctcgt ccttggtgac gccgttgcgt agtgcacctt tgacatgcag cttcaactcg
    14701 tgcggccggt tcaggatgct gatcatggcg atgttgagca tactgcgagt cttgcgcgaa
    14761 agaccatcgc tgccccacgc ggcgccccag caatattcgg tgacgagttc ctgaaagggc
    14821 cggttgaaat cgtcggcatt cttcatcgac gcctcgacgt aatccttgcc gagcacggcg
    14881 gtgcgaactt cgagaccctt gtcgaacctg gctttgtcca tggtggtttc ctgttttgaa
    14941 ggttcgacgt cgtgccgaac cgatgagcgg ggctggaaat ctgcccgaat agcgtcgcgg
    15001 cgtcaccggc cgatttgggc gctggatcat ctctcgatcg tgcattaagg ctttcaacgc
    15061 gaatctgttg ggcgaacaat gatccacaac gacagctccg tcgctgttat cggcggcggt
    15121 attggcgggc tggccgccgc tctatgcctg ctgaaggccg gttttgacgt gcacgtctac
    15181 gagcaggcaa aggcgctcgg cgagattggc gccggcatca atatcggccc caatgcctca
    15241 cgcattctgc atcggcttgg gatcagcgac gtgctggcga agaccggtgt caagcccctg
    15301 agattcgacc agcgccgctg ggacgatggc cgctatttgc ttcgctctcc gctgggggag
    15361 gtggtcgaga ccgctttcgg ggcgccgtac tatacctttc atcgcgccga tttgcatcgc
    15421 gcactggcgg atgcgattcc gccggaccgg gtgcatctcg cgcaccagtt caccaacctg
    15481 atcgaccacg gtgaccgcgt cgaagcgcat tttgaaaacg gaacatcaat ctcagccgct
    15541 gccctcattg gggcggacgg aattcattcg gctgtgcgcc acgctttgtt tggcccggag
    15601 aagcctcgct tcaccggttg tgttgcgtat cgcggcctgg tgccatcgaa tcggttagcg
    15661 caccttcgcc tcgaattgac gactcagatc tggatgggtc ctggccgcca tttcgtccac
    15721 tactttgtgt cggcgggaag actggtcaat tttgtggcga tcactgaaga aaattcctgg
    15781 atgcgagaat catgggttga ccgtggagag gtggctgatg tccttgccgc attctccgga
    15841 tggcactccc aggtcctctc cataattgaa tcggcggacg aggcctacaa atgggcgctg
    15901 tttgaccgtg cgccgctacc gcgttggtcg gttgaccggg tcacgctgtt gggagactcc
    15961 tgccatccga tgctcccgtt catggggcag ggcgccgggc aggcgatcga ggacgcagcc
    16021 accctcaagg ggtgcctgct caagctttca ggcgacgtcc ccgcggcgtt gcgcctctat
    16081 gagcgactac ggctgccgcg agcatcgcgc ctgcaaggca tgtcggaaac caacaagtcc
    16141 cgctttcatt tgcctgacgg gcctgtccaa aaaaaacgtg atgttgagat ggccagcggc
    16201 gccaccgatt ggtcccttgc agccattgca tggctctatg agcacgatgc cgaagtggtg
    16261 gattgacgct ggaagaggcg ggtgcccaat atatgttcca tgtcggtaat ccccctcaga
    16321 ggcgctaagt tgggctcagg ccgagcagcc gcttctccct ctcccctggc gggcgaggag
    16381 ttcgcggcac cctcaaacct caactttagc agttctggta attacccctc accggagagg
    16441 ttgcaccatg ggctatgaaa ccatcgacgt cgcaccggtc acgccccgca ttggcgccca
    16501 tgttgacggc gtcacgctct cgaagccact cagcaaccgc caggtcgagg acttgcatca
    16561 cgcgctagca gagcaccaag ttctgttctt tcgcgaccag ccgctggatg tggaagccca
    16621 caagaggttt ggccgatact tcggcgagtt gcatgttcac cccagcacgc caggaccgga
    16681 aggacatccg gagatcttgc cgatccacgc cgacgccaat tccaagcgca tcgccggtga
    16741 gtattggcac tcggatgtgt cttgcgacga ggagccaccg atgggcagca tcctctatcc
    16801 ccatactgta ccggattgcg gtggcgatac cctcttcgcc agccagtatg cggcctatga
    16861 agcgctttcg ccgcaaatga aaatctatct cgaagggatg actgcgacgc attcgggcga
    16921 tcatgtctat cgcagaaaca acgcgctgat gggccgcgcc gaaaccggca aggtctaccc
    16981 g
//
LOCUS       DATILV010000695         1725 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3486775, whole genome shotgun sequence.
ACCESSION   DATILV010000695 DATILV010000000
VERSION     DATILV010000695.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1725
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3486775"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1567
                     /locus_tag="VLJ17_16505"
     CDS             <1..1567
                     /locus_tag="VLJ17_16505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011923538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HSV24617.1"
                     /translation="DHLPTDLAAAHAMILAQREMLTIARSEVTVSRLELERLKLMLAK
                     ARREQFGQSSERGKQLIEQLELAIEDIEETQAEVETKAEIVAPEAAKEKRARTPRPPR
                     KPLPDNLPVERVVEPPPCACGKCGGVRLRKLGEVVSKTLECEPRRWKIIEHVREKFSC
                     RDCEAITEPPAPSHPIPRGFAGPSLLAMVLVNKFLLHQPLNRQSATYAREGIELDVST
                     LADRVGACVVALEPIVQALWDHVLSAQRIHADDTTVPVLAKLKTVTGRIWTYVRDDRP
                     FGGTAPPAAVFRYSRTRAGDFPREHLADYVGIMQADAFAGFNGLYDAKRQPAPIIEAA
                     CWSHGRRKYFDLAKLNKSPIAIEAVRRIDELFEIERSINGKTPEQRVAVRHEKSKPLV
                     ADLEVWLRQQRALVSSKSEIAKAINYSLTRWEAFTRFLDDGRICLSNNAAERAIRGIA
                     VGRRNWTFAGSDAGGHRAAAAFSMIETCKLNNVDPQAWLADVLARLPDYPAHKIADLL
                     PWNWQAARRAIAA"
BASE COUNT          340 a          537 c          536 g          312 t
ORIGIN      
        1 cgatcatctc cccacagacc tcgccgccgc gcatgcgatg atcctagcgc agcgcgaaat
       61 gctgacaatc gccaggagcg aggtgactgt cagccggctt gagctcgagc ggttgaaact
      121 catgctggcc aaggcgcgtc gtgagcagtt cggacaatca tccgaacgcg gcaagcagct
      181 cattgaacag cttgagctcg ctatcgaaga cattgaggag acgcaggccg aagtagaaac
      241 caaggccgag atagtggcac ccgaggccgc caaggaaaag cgcgcccgca ccccgcggcc
      301 gccgcgcaaa ccattgccgg acaatctgcc agttgagcgg gtcgtcgagc cgccgccttg
      361 tgcctgtggc aaatgcggcg gtgttcggct gcgcaagctc ggcgaggtgg tgtcgaagac
      421 gttggaatgc gagccgcggc gatggaaaat catcgagcat gtgcgggaga agttctcgtg
      481 ccgggactgc gaggccatta ccgagccgcc ggcgccgtcc cacccgattc cgcgtggatt
      541 tgccgggccg agccttctgg cgatggtgct ggtcaacaag tttcttttgc atcagccgct
      601 caaccgccag agcgccacct atgcgcgcga ggggatcgag ctcgacgtct cgacgcttgc
      661 cgaccgggtc ggcgcctgcg tggtggcgct ggagccgatc gttcaggctc tgtgggatca
      721 tgtactgagc gcgcaacgta tccatgccga tgacacgacg gtgccggtgc tggcgaaatt
      781 gaaaaccgtg acgggtcgga tctggaccta tgtccgcgac gaccggccat ttggcggcac
      841 ggcgccaccg gccgcggtct tccgttattc gcgcacccgt gccggcgact tccctcgcga
      901 acatcttgcc gattatgtcg gcatcatgca ggccgacgca ttcgctggat tcaatggtct
      961 ctacgacgcc aaaaggcagc ccgcgccgat catcgaggca gcttgttgga gccacggtcg
     1021 taggaagtac ttcgatcttg ccaaactcaa caagtcgccg atagccatcg aggcagtgcg
     1081 ccgcatcgac gagctcttcg agatcgagcg cagtatcaac ggcaagacac cggagcaacg
     1141 tgtcgccgtg cgacatgaaa aatcgaagcc gttggtcgcc gacctcgagg tctggttgcg
     1201 ccaacaacgc gctttggtct cgtccaagag cgaaatcgcc aaggcgatca attacagcct
     1261 cacccgttgg gaagcgttca cccgcttcct ggatgacggt cgcatctgtc tttccaacaa
     1321 tgccgccgaa cgtgcgatac gcggcatagc ggtcggacgc cgcaattgga cctttgcggg
     1381 ttccgacgcc ggcggccacc gcgcagctgc cgcattttcc atgatcgaga catgcaagct
     1441 caataacgtc gacccacagg cttggcttgc cgacgtgttg gccaggctgc cggattaccc
     1501 cgcgcacaag atcgcagatc tcctgccgtg gaattggcag gccgcacgcc gcgcgatcgc
     1561 cgcctgatta gccgagatcg ccaaagttga gccacctgcg gcgctggccg gatgcgtacg
     1621 cttgaagtcg agaacctctt tctccggcat cagctcaata tcgccctgag gcgtgcaccg
     1681 caccgtcggc agcttcgcgg gagtgacagg gcgttgttgg tatgg
//
LOCUS       DATILV010000696         6408 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4254506, whole genome shotgun sequence.
ACCESSION   DATILV010000696 DATILV010000000
VERSION     DATILV010000696.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6408)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6408)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6408
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4254506"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..326)
                     /locus_tag="VLJ17_16510"
     CDS             complement(<1..326)
                     /locus_tag="VLJ17_16510"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HSV24618.1"
                     /translation="MDNIWLASALWIGLALAASLISIWTAISVALIEIMVGAVAGNII
                     GLPLSPWINYLAGFGAILLTFLAGTEVDADVVRRNFGASVGVGFVSFLAPYVGCLLAA
                     RYVLGW"
     regulatory      complement(450..510)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01734"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Fluoride riboswitches increase expression of
                     downstream genes that help mitigate the toxic effects of
                     very high levels of fluoride; They are found in a wide
                     variety of bacteria and archaea; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="fluoride"
                     /db_xref="RFAM:RF01734"
     gene            complement(582..1472)
                     /locus_tag="VLJ17_16515"
     CDS             complement(582..1472)
                     /locus_tag="VLJ17_16515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016840630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HSV24619.1"
                     /translation="MNGAVQGARSVSIGTACGIGAAIFWACGFTAARHGIAIGLSPFD
                     IAFHRYAWAGLVFLPGVLRSGIGNLKGIGWHRGFVLAVLGGPGQAVVSAAGFLVVPLG
                     HGGVIQPSCAALGGVLLATLILREHLPAVRVYGAIIILVGLAVIGHEALTTIGANGLL
                     GDFSFALAGLMFAMFGVLLRRWRIDPSRASTVLSALTLLYVPIHAAMFGFTRMVAAGW
                     FENATQAIVQGVFSGPLAIYLFARSVTLLGASRAAVFAALVPAATLVVGFLTLGEAPS
                     LAQVVGLAIVLVGFRLTQRA"
     gene            complement(1492..2673)
                     /locus_tag="VLJ17_16520"
     CDS             complement(1492..2673)
                     /locus_tag="VLJ17_16520"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HSV24620.1"
                     /translation="MLRTIAAFDRIGEENAFAVLARATNLAAQGRDIINLGIGQPDFR
                     TPDHIVEAAVKALRDGHHGYTPAVGILAVREAVAADLHKRLGVTVSPDEVMIMPGGKP
                     TMFISILMFGEPGADILYPDPGFPIYRSMIEYTGARPVPVPIREENAFAFSAEETLAL
                     ITPQTRLLILNSPANPTGGVTPKAEVDKLVDGLEKFPDVAVMSDEIYDHMVYDDERHV
                     CLLSYPSIRDRLILLNGWSKTYAMTGWRLGYAVWPGKLYDYARKLAVNLHSCVNASAQ
                     YAGLAALTGPQDETYRMVAEFDRRRKVVVGGLNRLPGVSCATPKGAFYAFPNIKRTGW
                     MAKPLAASLLEDAGVAIIGGPDFGILGEGYARLSYANSTENILRALDRMGEFLTSRKA
                     A"
     gene            2827..3684
                     /locus_tag="VLJ17_16525"
     CDS             2827..3684
                     /locus_tag="VLJ17_16525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HSV24621.1"
                     /translation="MTMSISDVRAAFRKLHESGCFVIPNPWDVGTARYLGHCGFKALA
                     TTSAGAAFSMGLPDGAVTRDMMLAHIRTIAEATELPVNADFEAGYAHDPETVAESVRL
                     CIATGVAGLSIEDATGDKAKPLYDLDTAVARMQAARRAIDQSGADVMLVGRAECFLVG
                     RPDLEETLARLNAYASAGADCLYAPGIRAAEQIAAVVAAVAPKPVNLLMSGATGLTVD
                     DLAGLGVRRISVGGALARVAWGPFMRAAKQIATEGRFDALADAVPQAEINGFFREDLK
                     GRKGRCATL"
     gene            complement(3681..4961)
                     /locus_tag="VLJ17_16530"
     CDS             complement(3681..4961)
                     /locus_tag="VLJ17_16530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HSV24622.1"
                     /translation="MREIRADDINPRFNWGRALPALGTMGVDFEERVDYRRLHRYRLS
                     RVKMALEKSDLGALLVFDVNNIRYVTSTKIGEWERDKLSRWALLTRTGEPILWDFGSA
                     AVHHKLYTPWLAPENCKAGLIGLRGTVNPAFGLMKRHAEEIASLIREAGVTDMPIGVD
                     IIEPPMMFELERAGLKVHDGQQVMLEAREIKSADEIALLNRAAAMVDGAYHLVYEQLK
                     PGVRENDIVANVNQFLYQHGSDDVEAINAISGERCNPHPHNFTDRMLRPGDQAFFDIL
                     QSFMGYRTCYYRTFNVGRATAVQHDAYQKAREWLDAAIALIKPGVSTDTVCSVWPKAE
                     EFGFPDEMSAFGLQFGHGLGLALHERPIISRVISMTHPTEIKEGMVFALETYCPASDG
                     YSAARIEEEVVVTDKGCRVITLFPAEQLPISHRY"
     gene            5152..5325
                     /locus_tag="VLJ17_16535"
                     /pseudo
     CDS             5152..5325
                     /locus_tag="VLJ17_16535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388434.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
     gene            complement(5371..6327)
                     /locus_tag="VLJ17_16540"
     CDS             complement(5371..6327)
                     /locus_tag="VLJ17_16540"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006613133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSV24623.1"
                     /translation="MLDTTKKIGWIGMGRMGFPMAERLLKAGYDVSIWNRTRAKAEPL
                     AKSGGKIVDRPSDLSNADVLFAIVSTGKDLEEVYFGPNGVGTANKMPPIFVDCSTIAV
                     EESAAIRKRLGERAAHFICCPVSGNAKVINSGKLSAVASGPEPSFRTVEPMIKVFAPR
                     GVSYVGDGELARICKIAHNVMLGVVIENLIEITLLTNKMGVPRHAFLAFLNNSVMGSM
                     FTAYKSPALVNLDWATTFTPELLRKDLDLGLELAREMDVPMPVTAATRETLQTHFGTA
                     TLQADPAAYLAKDFAALMETMALAAGMKLTSEDKKVPTGLES"
BASE COUNT         1281 a         1984 c         1981 g         1162 t
ORIGIN      
        1 ctccatccga ggacatatcg ggcggcgagc aagcagccca catagggggc aaggaagctc
       61 acaaagccga cgccgacgct cgcgccgaaa ttccgccgca cgacatcggc gtcgacttcc
      121 gtgccggcaa gaaaggtaag caggatggcg ccaaagcctg ccagatagtt gatccaaggg
      181 gagagcggca gaccaatgat attgcctgcc acggcgccga ccatgatctc gatgagggcc
      241 actgaaatcg ccgtccagat cgatatcagg gatgccgcaa gggcgaggcc gatccacagg
      301 gccgatgcaa gccaaatatt gtccattgca attcctcttt tcctgccatg ccgccgcaag
      361 ccgacgagcc gacaaattgc ggccgcggtc atgtggctcc ctggcggaaa agaaactcgc
      421 cggggccgcg acagacctac cgccgttgtt acacggtagg agtcatcagc ctcgccggcg
      481 gttttggggg accccatccc catcaacaag gatgatttta tccgcggcgc tgtgacttgc
      541 aatgaaaaat gcgcgatcga aaaacctatg atcactgagc cctatgccct ctgggttagc
      601 cgaaatccga ccagcacgat cgcgagccct acaacctgtg ccaagcttgg cgcttcgcca
      661 agcgtcagga aaccgaccac caaggtcgcc gccggcacca acgcggcaaa caccgcggca
      721 cgcgatgcgc caagcaacgt gaccgaacgg gcgaacagat agatcgccag cggtccggaa
      781 aacacaccct ggacgattgc ctgcgtagca ttctcgaacc atccggctgc caccatacgg
      841 gtaaacccga acatcgcggc atggatcgga acgtaaagca gcgtcagcgc gctgaggacg
      901 gtcgaggccc ggctcggatc gatccgccac ctgcgcagca ggacgccgaa catggcgaac
      961 atcagcccgg cgagtgcgaa gctgaagtcg ccgagcaatc cgttggcgcc gatagtggtc
     1021 agggcttcgt ggccgatcac cgcaaggccg accaggatga tgatcgctcc ataaacccgg
     1081 acggcaggaa ggtgttcccg gaggataagc gtcgccagca atacaccgcc gagcgccgcg
     1141 caggatggtt ggatcacgcc gccatggccg agcggcacca ccaggaatcc ggcagcgctc
     1201 accacggctt gtcccgggcc gcccaacacg gcgagtacga aaccacggtg ccagccaatg
     1261 cccttcaggt ttccgatccc cgagcgcagc acaccgggca ggaataccaa gccggcccag
     1321 gcataacggt gaaacgcgat atcgaacggc gacagtccga ttgcgatacc gtggcgagcg
     1381 gcggtgaatc cgcacgccca gaagatcgca gccccaatac cgcacgcggt gccgatgctg
     1441 acgctgcgcg cgccctgcac cgcgccgttc aaccgtgtgg cccgtcgctc gtcaggccgc
     1501 cttacggctc gtcaggaatt cacccatgcg gtcgagcgcc ctgaggatgt tctcggtcga
     1561 gttggcgtag gagagccgcg catagccctc cccgagaatg ccgaagtccg gccccccgat
     1621 gatggcgaca ccggcatcct ccagtaggga cgcggcaagc ggcttcgcca tccatccagt
     1681 gcgcttgata ttggggaagg catagaacgc gcccttggga gtggcacagg aaacgccggg
     1741 caggcggttt agccctccga ccacgacctt ccgccgccgg tcgaattctg ccaccatgcg
     1801 gtaggtttcg tcctgtgggc cggtgagcgc cgcgaggccc gcatactgag ccgacgcatt
     1861 gacacaggaa tgcagattga cggcgagctt gcgcgcatag tcgtagagct tgcccggcca
     1921 caccgcataa ccgagccgcc agcccgtcat cgcgtatgtt ttcgaccagc cgttgagcag
     1981 gatcaaccgg tcgcggatcg acggatagga gagcaggcag acgtgccttt cgtcgtcata
     2041 gaccatgtgg tcgtagatct cgtcggacat caccgcgacg tcaggaaatt tttcgaggcc
     2101 gtcgacgagc ttgtcgactt cggccttcgg agttacgccg ccggtcgggt tggcgggcga
     2161 attgaggatc aagagccgcg tctgcggcgt gatcagggcc agcgtctctt cggccgagaa
     2221 cgcaaacgcg ttttcttcgc ggatcggcac gggcaccggg cgcgccccgg tgtactcgat
     2281 catcgagcga tagatcggaa agccagggtc cggataaaga atatcggcgc caggctcgcc
     2341 gaacatcagg atcgatatga acattgttgg tttgccgccc ggcatgatca tcacctcatc
     2401 gggggacacc gtaacgccca accgcttgtg caaatcggcc gccaccgctt cgcggaccgc
     2461 caaaatgccg accgcgggcg tgtagccgtg atggccgtcg cgcagcgctt tcacggccgc
     2521 ttcgacaata tggtccggcg tgcggaaatc cggctggccg atgcccaaat tgatgatgtc
     2581 gcggccttgg gcagcaaggt ttgtggcacg cgccagcact gcaaatgcgt tttcctcgcc
     2641 gattcgatcg aaagccgcga ttgtgcgaag catgttccat cctcgtggga atttgtggta
     2701 cagcccgacg gccgcaactg aagcttgttt gcgccagttg gcgcggcact tcaaccgatc
     2761 gtgcggtgaa atgcaatcat cttggaataa acaagaaagt tcgcgagcag ccaagcctga
     2821 cagggggtga caatgtcgat atccgacgtt cgggcagcct tccgcaagct ccacgagagc
     2881 ggctgcttcg tcattcccaa tccgtgggac gtcggaaccg cgcgctatct aggccactgc
     2941 ggcttcaagg cgctggcgac caccagcgcg ggcgcagctt tcagcatggg actgccggac
     3001 ggagccgtga cgcgcgacat gatgttggcg cacatccgca ccatcgcgga agcgaccgag
     3061 ttgccggtca acgccgattt cgaagccggc tatgcgcatg atcccgaaac ggtcgctgaa
     3121 agtgtgcggc tgtgcatcgc aaccggcgtc gccggtctat cgatcgagga cgccaccggc
     3181 gacaaggcca agccgctcta cgacctcgac acggcggtgg cccgcatgca ggcggcacgg
     3241 cgagcaatcg atcagtccgg tgcggacgtc atgctggtgg ggcgcgcgga gtgcttcctg
     3301 gtcggccggc ccgatctcga ggagactctc gcgcgcctca acgcctatgc ctcagcgggt
     3361 gcagattgcc tttatgcgcc cggcatccgc gccgctgagc aaatcgcggc cgtcgtcgca
     3421 gcagtcgccc cgaaacccgt gaacctgctg atgtcgggcg cgactggcct caccgtcgat
     3481 gatctagcgg gcctcggcgt gcgccgcatc agcgttggcg gcgcgcttgc gcgtgtcgcc
     3541 tggggtccct tcatgcgagc ggcaaagcag atcgcgacgg aaggccgctt cgatgccttg
     3601 gcggacgccg taccgcaggc agagatcaac ggttttttcc gcgaggatct gaaagggcgc
     3661 aagggacgat gcgcgacact ctaataccga tggctgatcg gcaattgctc ggccggaaac
     3721 agcgtgatga cgcggcagcc cttatcggtg accacaacct cctcctcgat gcgcgcggcc
     3781 gaatagccgt cgctcgccgg gcagtaagtt tcgagcgcga acaccatgcc ttccttgatt
     3841 tcggtcggat gcgtcatcga gatcacccgg ctgatgatcg gccgctcgtg cagcgcgagc
     3901 ccgagaccgt ggccgaactg tagaccgaac gcgctcattt cgtccggaaa gccgaattcc
     3961 tcggctttcg gccacacgct gcagacggtg tcggtcgaga cgcctggctt gatcagggct
     4021 atcgcggcat cgagccattc acgcgccttc tggtaggcgt cgtgctgcac cgcagtggcg
     4081 cggcctacat tgaaggtgcg gtaataacag gtgcgatagc ccatgaatga ttgcaggata
     4141 tcgaagaaag cttgatcgcc ggggcgcagc atgcggtcgg taaaattgtg cggatggggg
     4201 ttgcagcgct cgcccgagat ggcgttgatg gcctctacat cgtcggaacc gtgctggtag
     4261 agaaactggt tcacattggc gacgatgtcg ttctcgcgca cgcctggctt cagctgctcg
     4321 taaaccaggt gataggcgcc atccaccatg gcggcggcgc gattgagcag cgcgatctcg
     4381 tcggcggatt taatctcgcg ggcttccagc atcacctgct ggccgtcatg taccttaagg
     4441 cccgcccgtt ccagctcaaa catcatcggc ggctcgatga tatcgacccc gatcggcatg
     4501 tcggtgacgc ccgcctcacg gatcagggag gcaatctctt cggcgtggcg cttcatcaag
     4561 ccgaaggcag gattaacggt gccgcgaaga ccgatcagcc cggccttgca gttttcgggc
     4621 gccagccatg gtgtgtacag cttgtggtgc acggcggcgg acccgaagtc ccacaggatc
     4681 ggctcgccgg tgcgggtgag cagcgcccag cgcgagagct tgtcgcgctc ccattcgccg
     4741 atcttagtcg aggtgacgta acggatgttg ttgacgtcga acaccaagag cgcgccgagg
     4801 tcggatttct cgagggccat cttgacgcgc gaaagccgat aacggtgcaa gcgccggtaa
     4861 tcgacccgtt cctcgaagtc gacccccatc gtgcccagcg ccggcaaggc tcggccccaa
     4921 ttgaaccgcg gattgatgtc gtcggcgcgg atttcacgca ttttctggtc catggtcgtc
     4981 tccttggaag tcgcgggcat cggaagtcgc gggcatctcg ttcgatacct tagatgggcc
     5041 tgcgatttag ccaattggat agtttaacga ttggttggtc gtccctcaaa atgatggtgt
     5101 cagcaaccgg agtcaggcgt tgcctgctcc aactatcatc gaggaacgac catgaactat
     5161 tatgcgggaa ttgacgtgtc attggaagaa tcgagcgttt gcgtgatcgg tgggaccggc
     5221 aagatcgtcc gggaagggaa ggtcgcgagc ccgagcctct gaccctggtt tggttggccg
     5281 ggcgtgaact tgacgcggat cgggttggaa gcgggatcgc tgtcgcaccc ggattacgct
     5341 atcgcgctcc atccgggctg ccaacatcgt tcaactctcc aatcctgtcg gcaccttctt
     5401 gtcttcgctc gtaagcttca taccggctgc cagcgccatg gtctccatca gggcggcaaa
     5461 atccttggcg agataggcgg ctggatcggc ctgcagggtc gcggtgccga aatgcgtctg
     5521 cagcgtctcc cgcgtcgcgg ccgtcaccgg catcggcacg tccatctcgc gggcgagctc
     5581 caagcccaga tcaagatcct tgcgcagcag ctctggcgtg aacgtcgtcg cccagtcgag
     5641 attgaccaaa gccggcgatt tatatgcggt gaacatcgac cccatcacgc tgttgttgag
     5701 gaacgccagg aacgcatggc gcggcacgcc catcttgttg gtaaggagcg tgatctcgat
     5761 caggttctcg atcaccacgc cgagcatgac attatgggcg atcttgcaga tgcgggccag
     5821 ttcgccgtca cccacataag aaacgccgcg cggggcaaac accttgatca tcggctcgac
     5881 ggtgcgaaat gacggctcgg gacctgatgc caccgccgac agcttgccgg aattgatgac
     5941 tttggcgttg ccgctcaccg ggcagcagat gaaatgtgcg gcgcgctcgc caaggcgctt
     6001 gcgaatagcg gccgattctt cgactgcgat ggtcgagcag tcgacgaaga tcggcggcat
     6061 cttgttggca gtgccgaccc cgttcggacc gaaatagacc tcttcgagat ccttgccggt
     6121 cgaaacgatc gcaaatagca catcggcatt ggagagatca ctcggccggt cgacgatttt
     6181 gccgccggat ttggcaaggg gctcggcctt cgcgcgggtg cggttccaga tcgacacgtc
     6241 gtaaccggcc ttcagcagcc gctcggccat cggaaagccc atgcggccca ttccgatcca
     6301 gccgattttt ttcgtcgtgt ctagcatccg acttctccgc tatccgaaac ctacgcaaag
     6361 ttgagctaag cttcgcaaag ctcgtcaata acgttcggcc cctgcttc
//
LOCUS       DATILV010000697         9407 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_675889, whole genome shotgun sequence.
ACCESSION   DATILV010000697 DATILV010000000
VERSION     DATILV010000697.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9407)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9407)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9407
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_675889"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..502
                     /gene="otsB"
                     /locus_tag="VLJ17_16545"
     CDS             <1..502
                     /gene="otsB"
                     /locus_tag="VLJ17_16545"
                     /EC_number="3.1.3.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004805 - trehalose-phosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="trehalose-phosphatase"
                     /protein_id="HSV24624.1"
                     /translation="GHGVEIRLSADDATQARHVSAIGGALRKLIAEVAASEPRIVLED
                     KGSSLAVHYRLAPEIEQILKTKIAAIISSLAVKDLEVMYGKAVIEIKPTNFSKGEAVR
                     EMMKNPPFAHRKPIFIGDDTTDESVFKVLPMLGGVGYSVERLILGANGKFDSSSDVRC
                     WLARLI"
     gene            complement(748..906)
                     /locus_tag="VLJ17_16550"
                     /pseudo
     CDS             complement(748..906)
                     /locus_tag="VLJ17_16550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612008.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
     gene            1335..1820
                     /locus_tag="VLJ17_16555"
     CDS             1335..1820
                     /locus_tag="VLJ17_16555"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HSV24625.1"
                     /translation="MIGSTVLSILSEMKDETAVSRMYVETASLMLAARLLQTYCDSGS
                     CAFTTPSSHQLDDARMRRVLDYISANIADEIALAELAGIAALSTFHFARMFTRTIGVS
                     PHRYVSRLRLENAMAEVAAGRLPLAEIPFNARFSSQASFTRAFHRATGMTPAEYGRRG
                     R"
     gene            2434..2850
                     /locus_tag="VLJ17_16560"
     CDS             2434..2850
                     /locus_tag="VLJ17_16560"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HSV24626.1"
                     /translation="MGVSPAAILQTLLSNPVDLEHVRSLTTPDVTYVSLNEHNPDLKA
                     LLPWTGTNKGPESIAKIFKDINETWETKAFEVRDIIEQGDNVAFFGTFTYRGRQTGRD
                     VTSPFSLFAKLISGKISYLQFLEDTFGTSRTVNPQH"
     gene            2990..3454
                     /locus_tag="VLJ17_16565"
     CDS             2990..3454
                     /locus_tag="VLJ17_16565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012592347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HSV24627.1"
                     /translation="MPEAFRVNVNGAEHVVSAEGDTPLLYVLRNDLGLNGPKFGYGLA
                     RCGACTAIVDGEATRTCVFPLSAVGSASVVTLEGLGSTENPHPLQKAFIAEQAAQCGY
                     CINGMIMTAKAFLDRNQHPTSAEIRQALAQNLCRCATHWRIIRAVQSVAKGI"
     gene            3456..4181
                     /locus_tag="VLJ17_16570"
     CDS             3456..4181
                     /locus_tag="VLJ17_16570"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSV24628.1"
                     /translation="MNPNSGTIPFSREYSRRQFGQAAAGIVLLFSMNPVRVLGQIAPG
                     KLPVDLETNKRLDSWLRINADGTVEVFTGKVEVGQGNITALAQITAEELGVGFERIRM
                     RPADTSHSPDESYTAGSASIEVGGGALRYAAADARATLLEMAAAKTGISVDSLTVDDG
                     VISSSAGVGRVTYWELASEGLLVRDARRDIPLKTNSNRHIVGTSVPRLDIPAKVTGGE
                     AFVQDMPLPGITIVRYLLTLVRW"
     gene            4197..4475
                     /locus_tag="VLJ17_16575"
     CDS             4197..4475
                     /locus_tag="VLJ17_16575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HSV24629.1"
                     /translation="MIRSFRDKALERFFATGDGRRLSVQNTGRIANILRALDDASRPE
                     DMNLPGFRFHALVGRQKGRYAVNASGNWRTKFGWMESDAVDVDLEDYH"
     gene            4487..4798
                     /locus_tag="VLJ17_16580"
     CDS             4487..4798
                     /locus_tag="VLJ17_16580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antitoxin"
                     /protein_id="HSV24630.1"
                     /translation="MTKKLPKRGLPPMHPGQLLREEILPALDRPKTEIARLLGVSRQT
                     LYDILEERQPVTPMMALRLGKLCGNGPDLWLNLQKRYDLQRAEQKLGEKIKAIPTLEV
                     A"
     gene            complement(5297..7666)
                     /locus_tag="VLJ17_16585"
     CDS             complement(5297..7666)
                     /locus_tag="VLJ17_16585"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSV24631.1"
                     /translation="MRDNDLPKAGLSRRDLFSTAAAATGALVVGFWMPQRAAGQMTSP
                     EGATSISATWATEPDVKEINAWVVVAPDDTVTIRIAQTELGQGVWTSNAMMVAEELQC
                     DWSKVRPQYASANRDGREMAPEWTLQVMGQGATDPLGGGEPEFGRRSRTGVEGIPNSL
                     YRRMRTNAAASVKDGRYYLQLAGAEARERLLLAAAKSWGVAVEELSAANSVITHRPTA
                     RTITYGQVASLAAQTPHPDPERIRIKPPSEWKLMGTEQKNLDVPLKVTGKTIYGIDVR
                     LPGMKWAAVKTCPVYGGAVKSYDFERIRSEPGVISAVEIPIPDPSLIRDRVFSGGIAV
                     IAESWYQAKTALDKMPIEWNVPPAHAARNTANMRAVLIAALDQPGRVHVNLGDCDRAI
                     AGSARIVEATYSTPYLPRARMEPGNATVLVTDNRVDIWIGDQSPQETRQSASRITGIP
                     EQNVYLHMCHLGGGFGRNGNGPQAEQAIYIANQNRGTPIHLLWTREEDFIGTTYRSMG
                     VARLRAALDADGWPIAMEVRTAMDEKAPGAIAAFDKASRYYVPNYRFSTHSATFHIPV
                     GTRRGVGEPAHDFYRESFMDELAHAAGKDPYLYRRELILRTDLPYKADMIKALDTASE
                     MSGWGKPLRPGMARAIALEERGAEGGGHATISAQVHTVSISRDGELRLLRVDVAHEEG
                     FGLVNPLSVKKQIEGQITWFYNDTMLQECNVSEGRISENNFDRFPLSRIRENPPEINI
                     TFFKTGHWLRGMGHDRGTSVQSGIADAIFRITGKRYRDLPFRNCDLTWS"
     gene            complement(7666..8133)
                     /locus_tag="VLJ17_16590"
     CDS             complement(7666..8133)
                     /locus_tag="VLJ17_16590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HSV24632.1"
                     /translation="MAIELTVNDVRHSVEVAPETPLLWVIRDQLGLTGTKFSCGIAQC
                     GACTLHIDGRPVRSCSVPVSAAAGKAVTTIEGLSADGTHPVQRAWIELDVPQCGYCQS
                     GMIMSVVALLEKHPHPTDAEIDAEVTNACRCSTYHRIRKAIRLAAAQMQRRAL"
     gene            8847..9305
                     /locus_tag="VLJ17_16595"
     CDS             8847..9305
                     /locus_tag="VLJ17_16595"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSV24633.1"
                     /translation="MRIVIGFTAGGTGDILARITGQWLSGRLGQPFIVENRPGAASNL
                     SIQTAINSPADGYALVYLSSSNAINASFYQMLPFDLERDITPIAAIARVPFVTDVHPS
                     IPAKTLADFITYAKSNPGKVSMASFGVGSSSSRRLQTSRPFRPSTIDGPG"
BASE COUNT         1860 a         2766 c         2887 g         1894 t
ORIGIN      
        1 gggacacggc gtcgaaatta gactttccgc cgatgatgcc acgcaagcgc ggcacgtttc
       61 cgcaatcggt ggcgcattgc ggaagctgat cgcggaggtg gcagcatccg agccgcgcat
      121 tgtcctcgag gacaagggct cctcgctggc agtgcactac cgacttgcgc ccgagatcga
      181 gcagatactc aagaccaaga tcgccgcaat catttcgagc cttgccgtaa aggaccttga
      241 ggtcatgtac ggcaaggcgg tgatcgagat aaagccgacc aatttcagca agggagaagc
      301 cgttcgagag atgatgaaaa atccgccgtt cgcacatcgc aagccaatat tcattggcga
      361 cgacaccacc gatgaatcgg tgttcaaggt tctgccgatg ctcggcggcg tcgggtattc
      421 ggtggaacgg ctcattctcg gagcgaatgg caaattcgac tcgtcatccg acgtccgctg
      481 ctggctagcg cgtctaatat aagtacgaac agtcggcaaa cgggaagctc accctgagtc
      541 aaacggtcgc gacggtcttg tgatcgaacg agacgtcacc gcgcgccttc cagccgactc
      601 cgtccggaca gtcggtcacg ggctgccccg ctgggcgcgt ccggagtcac tcgaactccg
      661 gaagccgggc agtggcgcgc ccgatgagag gtggccccgg ttctttgaac aaaatttccg
      721 ctttgccaag tggatcgtcg gccggggtta agctgccctg cggaccggca gtgggtcgaa
      781 gtaggcttga tcggggatgc ggccgtcaag ggctgtatga ggtcgtcttg cgttgtagaa
      841 ggcaaggtag caaccgatcg attgccgtgc ttcggagccc cgatagaacg tccgagggaa
      901 caattctact actgggacta tccaatggag ctgcagacac acggtgcgag caaatatgca
      961 aactcagtgc tattgcggtc atccgcgggg ctggggtggt cgaacttgtc ggcggagttg
     1021 cgctcacacg ggatgagtca gacgcaagtc atcgttccgc agcacgtgca gttatccttc
     1081 acagtcgagg gcaacgacag ctgttttgta aggcgaaccg gcgcgggtca atgtcaggag
     1141 accatagcaa caaccggaac tttttgtttg agtccggcta gggtaggtga caacgtggtc
     1201 acgatcacgg ctcctattgc cagatcgatg cattatacct gcccgtgacg ctatttcgtc
     1261 gattgagcga tgaccttaat cttccgcggt cgcccgccca ctccattcgt tatatcgccg
     1321 gcgtccgaga tgacatgatc ggttcgacag tactctcgat cctgtcggag atgaaggatg
     1381 aaaccgctgt cagccgcatg tatgtggaaa cagcgtccct gatgctggct gctcggcttc
     1441 ttcaaacata ttgcgacagc ggatcttgcg cattcactac gccctcttcg catcagctcg
     1501 atgatgctcg gatgcgtcgc gttctggatt atatttcggc aaatattgcc gatgaaatcg
     1561 cgcttgcgga gttggccggg atcgcggctc tcagcacgtt ccattttgcg cgcatgttca
     1621 cgcgtaccat cggcgtctcg ccgcatcgct atgtcagccg gctccggctc gagaacgcga
     1681 tggccgaagt agcagcgggc agattgccgc ttgcagagat acccttcaat gcacgcttct
     1741 cgtcgcaggc aagttttacg cgggcgtttc atcgcgcgac cggtatgacg ccagccgaat
     1801 acggccgccg tgggcgctag cgccgcaagt cgatgcattc gagcggtcaa caaatcatgt
     1861 tggctgccga acggacgagc atcagtccag tctccggctt ttccgacacg attgaggatg
     1921 cccctatcga ggaacgttat ccagcaatgg cggtcaaaac aacagcaagc acgggaaaga
     1981 caagcggcgc taattcgact tcattcatta gggaagctgt ccagggctga cctcagattg
     2041 gtcgacgcga ggcagcggcg ggctgagaca atgagttcaa ccttattcgt cccgcaggct
     2101 tacgcgcaaa cgcagattgt cgagcaggcc gtggtcggca ccgggtcact tgacgataca
     2161 ttgctgactc aatttcacac gcgatgtctc ggccaagacc gctctcggcg acgtgaagtt
     2221 ctggaaaggg cggtacctgg tccaaggctc gcgtgcttca cgtgcaatac cagaacgtcc
     2281 aatccgccga tctctcggat ttcaaggacg gcaggacgca aacggtcgtg tggccatcaa
     2341 gtcttgcttc cgacgcgctc atctatccct acgcaaaggc gaagcggaac gtctgaggcg
     2401 tagacctttg ttctggcaaa gaggagtaca accgtgggcg tttcacctgc cgcaatcctc
     2461 cagactttac tttccaatcc tgttgacctt gaacacgtca ggagcctgac gactccggat
     2521 gtcacctacg tgtcgctcaa tgaacataat cccgatctca aggcccttct gccttggacc
     2581 ggaacaaaca aaggcccgga atcaatcgcg aagattttca aggacatcaa tgagacctgg
     2641 gaaaccaaag ccttcgaagt gcgtgatatc attgaacagg gtgataacgt cgccttcttc
     2701 ggcacgttta cctacagagg ccgtcagact ggccgggacg tcacctcgcc attctcgctg
     2761 ttcgcgaagc tgatcagcgg caagatctcg tacttgcagt tcctagaaga cacatttgga
     2821 acttctagaa cggtcaatcc gcagcactga gcaaaccggc caatgagtcc tcccggtttc
     2881 gactgtccgg agaccgtttg ggagcctgca aattgctgat accgaacgtg agagaagtat
     2941 aaacgagcag acgaggatcg agacggctcg gcactagatg gaggacggga tgccggaagc
     3001 gtttcgcgta aatgtgaacg gcgccgagca tgtagtgagc gccgagggcg acacgccgct
     3061 tctctacgtt ttgcgcaatg atctcggtct caatggaccg aaattcggct acggcctcgc
     3121 gcgatgcggc gcctgcaccg ccatcgttga cggcgaggca acccgcacct gcgtattccc
     3181 tctttcggcg gtgggcagtg catccgtggt cacgctggaa gggctcggaa gcaccgaaaa
     3241 cccgcatccg cttcaaaagg cgttcattgc agagcaggcg gcgcagtgcg gctattgcat
     3301 caacggaatg atcatgaccg caaaagcctt ccttgatcga aaccagcacc cgaccagcgc
     3361 tgaaattcgt caggccctgg cccaaaatct ctgtcgctgc gcgacccatt ggcggattat
     3421 tcgggcggtt cagagcgttg cgaaggggat ctgacatgaa ccctaactca ggtacgatcc
     3481 cgttctcccg cgagtactcg cgtcgccagt tcggccaagc ggcagcgggg atcgtgctgc
     3541 tcttctcgat gaatcccgtt agggttcttg gacaaatcgc gccaggaaaa cttcccgtcg
     3601 atctggaaac caataaacgt ctcgattcat ggctgcggat caatgcggat ggaacggtcg
     3661 aagtgttcac tggaaaagtg gaagtgggtc aggggaacat taccgcgctt gcgcagatca
     3721 ctgcagagga gctcggcgtc gggttcgagc gaattcgaat gcgcccggct gacacctcgc
     3781 attctcccga cgagagttat accgccggaa gcgcctcgat cgaggtcggc ggcggcgccc
     3841 ttcgctatgc ggcggcagac gctcgcgcaa cccttttgga gatggctgcg gcgaagacgg
     3901 gcatctccgt cgacagcctt acagtcgatg atggggtgat cagcagttcg gcgggcgtcg
     3961 gccgggtcac ttattgggag cttgcttcgg aaggactcct cgtccgcgac gcgaggaggg
     4021 atattcctct gaaaaccaat tcgaaccgcc acattgttgg aacttccgtt ccgaggctcg
     4081 acataccggc gaaggtcacc ggtggcgaag cctttgtgca ggatatgcca ctgcccggaa
     4141 ttaccattgt aaggtacctc ttgacacttg tcaggtggta ggttacattg ccgggcgtga
     4201 tccggtcgtt cagagacaag gccctggagc gcttcttcgc gaccggagac ggacgccggc
     4261 tcagtgtgca gaacacggga cgcatagcca acattctgcg cgcacttgat gacgcgtcac
     4321 gcccggaaga tatgaacttg cccgggtttc gcttccacgc gctcgtcggt cgccagaaag
     4381 gccgatatgc agtcaacgcg agcggaaact ggcggaccaa attcggctgg atggaaagcg
     4441 atgccgtcga tgtcgatttg gaagattatc attgaggaca ggttcgatga ccaagaaact
     4501 cccgaaacgc ggcttgccgc ccatgcatcc gggccaactt ttgcgcgagg agattttgcc
     4561 ggcgcttgat cggcccaaga cggagatcgc caggttgctc ggcgtatcgc gtcagacgct
     4621 ctacgacatt cttgaggaaa ggcagccggt gacaccaatg atggcattgc ggctcggtaa
     4681 gttgtgcggg aacggtcccg acctctggct caatctgcag aagcgctacg atctgcagcg
     4741 ggccgagcag aagcttggag agaagatcaa agctattccc acattggaag tggcataaaa
     4801 acttgcgtca ccgcctccga cgtcgtgcct ctgaggagga acggctaagc tggaataatt
     4861 tttcgcagat tagaatgcct gttggatggg cgttcgccgc cgcgtgatcc atttggagcg
     4921 tttcagcgcg gagctttctc catagtccga gcgtctctcg atcgatcctg gctccgcggc
     4981 cgcgtcttat tcaattcgga aaagagcgcg cccacggcgc ctcgaggcga gcagatggag
     5041 gggccgacac gcaatgtcgc ggtacagtac aaacggggcc agtgagtaaa cttcggctta
     5101 ggggcgagta gagagagcct atgccttggt ggtggggttg caccgaaacg gtatcaccag
     5161 cgctgccgca cctgcatagg atctctactc ggtcatcttc gactgttgtg atgggccgtc
     5221 aacgacggtt gatctgcctt caacagcgga aagatcggca ctcgccgaac ggatcgacgg
     5281 cagggccgcc ggagcttcaa ctccaggtca gatcgcagtt gcggaacggc aggtcccgat
     5341 aacgcttccc ggtgatgcgg aagatggcat ccgcaatgcc ggattgcacg gaggtgccgc
     5401 ggtcgtgacc catgccgcgc agccagtgcc cggtcttgaa gaaagtgatg ttgatttccg
     5461 gcggattctc cctgatgcgc gacagcggga atcggtcgaa attgttttcc gatatgcgac
     5521 cttcgctaac gttgcactcc tgaagcattg tgtcgttata gaaccaggtg atctggcctt
     5581 cgatctgttt cttgaccgac agcggattga ccaacccgaa gccttcctcg tgcgcaacgt
     5641 cgacccgcag caggcgcagc tcgccgtccc ggctgatgga gacggtatgg acctgggcgc
     5701 tgatggtggc gtggccacca ccctcggcgc cgcgttcctc aagcgcaatg gcccgcgcca
     5761 tgcccggccg caacggcttg ccccagcccg acatttcgga tgcggtatcc agcgccttga
     5821 tcatgtcggc cttgtaggga aggtcggtgc gcaagattag ctcgcggcga tagagatagg
     5881 gatccttgcc ggccgcgtgg gccagctcat ccatgaaact ctcgcgatag aaatcatgcg
     5941 ccggttcacc gacgccgcgc cgcgtgccca ccgggatgtg gaaggtcgcg ctgtgggtcg
     6001 agaagcgata gttgggcacg tagtaacgcg acgccttgtc gaacgcggcg atcgcgccag
     6061 gggccttctc gtccatggcg gtgcgcactt ccatggcgat cggccagccg tcggcgtcga
     6121 gcgcagcgcg caagcgagca acccccatgg agcggtaggt cgtgccgatg aagtcctcct
     6181 cgcgcgtcca caagaggtgg atgggcgtgc cgcggttctg gttggcgatg tagatcgcct
     6241 gctcggcttg cggaccgttg ccgttgcggc cgaagccgcc gccgagatgg cacatgtgga
     6301 gataaacgtt ctgttccgga atgccggtga tccgggacgc cgactggcgc gtttcctggg
     6361 ggctctggtc gccgatccag atatcgaccc ggttgtccgt gacaagcact gttgcgtttc
     6421 cgggctccat ccgggcgcgc ggcagatagg gcgtggagta ggtcgcttcg acgatcctgg
     6481 cgctgcccgc gatggcgcgg tcgcagtccc cgagattgac atgcacgcgg ccgggctggt
     6541 cgagggccgc gatcagtaca gcgcgcatgt tggccgtgtt gcgcgcagca tgcgcgggcg
     6601 ggacattcca ttcgatcggc atcttatcaa gcgccgtctt ggcctggtac cagctctccg
     6661 cgatgacggc gatgccaccg ctgaaaacac ggtcgcggat caaggacgga tccgggatcg
     6721 ggatctcgac cgccgagatg acgccgggct cactgcgaat ccgctcgaaa tcgtagctct
     6781 tcacggcgcc gccgtagacc ggacaggtct taacggccgc ccatttcatg ccaggcaggc
     6841 ggacatcgat gccgtatatg gtcttgccgg tgactttcaa agggacgtcg agattcttct
     6901 gctcggtgcc catcagcttc cactccgagg gcggcttgat gcggatccgc tccggatcgg
     6961 gatgcggcgt ctgagcagca agcgacgcaa cctgaccgta agtgatcgtt cgcgccgtcg
     7021 ggcgatgggt gatcacgctg ttcgccgcac ttagctcttc gaccgctacg ccccaggatt
     7081 tggcggccgc caacagcagt cgctcgcgcg cttccgcgcc ggcaagctga aggtagtagc
     7141 ggccgtcctt cacggacgcc gcggcgttgg tccgcatgcg ccggtagagg ctgttcggga
     7201 tcccctcgac gccggtccgg ctgcggcgcc caaactcggg ctcgccgccg ccaagcggat
     7261 cggtcgcgcc ctggcccata acttggagcg tccattccgg cgccatctcg cgtccgtcgc
     7321 gattggcgga cgcatattgc ggccgaacct tgctccagtc gcactgcagc tcctcggcga
     7381 ccatcatggc attggaggtc cacaccccct gaccaagctc ggtctgggcg atacgtatcg
     7441 tcacggtatc gtcgggcgca acgactaccc aggcgttgat ctccttgacg tcgggctcgg
     7501 tggcccaagt agcacttatt gatgtggcgc cttccggact tgtcatttga cccgcagcgc
     7561 gctgcggcat ccagaaaccg acaacgagcg cgccagttgc ggcagcagcg gtggagaaga
     7621 gatcgcggcg agacaggccg gccttcggga gatcgttgtc gcgcatcaga gggccctcct
     7681 ctgcatctgg gctgcggcca gccggatcgc cttgcggatg cggtggtagg tgctgcagcg
     7741 gcacgcattg gtgacctcgg cgtcaatctc cgcatcggtt ggatgggggt gcttctcgag
     7801 caacgccacg acgctcatga tcatgcctga ctggcaatag ccgcattgcg gcacgtcgag
     7861 ctcgatccag gcacgctgca ccggatgcgt cccatccgct gataagccct cgatcgtggt
     7921 tactgccttg ccagctgcgg ccgagaccgg cacgctgcag gagcgaactg gtcggccgtc
     7981 gatgtgcagc gtgcaggccc cgcattgcgc aatgccacag ctgaacttag tgccggtgag
     8041 gccgagctga tcgcggatca cccagagcag cggcgtttca ggcgcgacct caactgagtg
     8101 cctgacgtca ttcacggtga gctctattgc catggcgttc cccgctaatc gaccatctgt
     8161 gtcttgtgca ggtcgactat ttgtacgccg ccggcggaag tttgtcatcg gcggctatct
     8221 tgctttcgcc acagcaccag ctggacgtga ctatcgagtt actcggtggc gaaagggtgg
     8281 aggtcgcggt cgccggcagc gcccctgagg gcgctttggc gcaacgcgat gcgaaccgtt
     8341 gctcgtctgc tgctgcggtc ggctgacatg ctcgtgcccg ccacgcgggc gggcacgaca
     8401 tcggtcgcac gagctgtgcg gacgttttaa attgctgtaa tgggcgccct ccgcggtcgt
     8461 gggtcgctgg cccaaatttg ttcggctctc tgtttgggct ccgcgtttgg actgacttcc
     8521 gagagtcgat acagttcgag cagcgcggca aggtcggaag tcttggcaag tctggcattg
     8581 gggcatttcg tcacccattc gcaaactgtc ccgttcgggt gatgagcgcc agatcaggcc
     8641 cgcaccggca atgtccgcat ggcacctgat tgcagcggtc ccacgccgac caccaatcac
     8701 cttcccctac aacgcggagc gctataggct cgcctgcaaa atcgctgtga ggatcaagga
     8761 tgcgacagcg ggatttcatt gcggggatcg gcagcgctgc ggcatggcca gtcattgcgc
     8821 gagcgcaagc ctatccaacg cggccggtgc ggatcgtcat cggctttact gccggcggaa
     8881 cgggcgacat cctggcgcgg atcacaggcc agtggttgtc gggccggctc ggtcaaccgt
     8941 tcatcgttga aaatagaccg ggcgccgcaa gcaacttatc cattcaaacg gcgataaatt
     9001 ctccggctga cggctacgcc ttggtctacc tgtcgagttc caacgcaatc aacgcatcct
     9061 tttatcagat gctccctttt gacctcgagc gagatatcac gccgatcgcc gccatcgcgc
     9121 gggtgccttt tgtcacggac gtgcacccct cgatcccggc caagacgctg gccgacttca
     9181 ttacctatgc caagtcgaat cctgggaagg tcagcatggc ttcgttcggc gttgggtcgt
     9241 cgagtagccg ccgcctccag acgtcaagac cgttccggcc ctcaacgatt gatgggccgg
     9301 gctgatcaag gcgccttaca gcacgtggaa tggacaacaa tgacaatcac ggattcaggg
     9361 cttcacattt ggcgcgccga agcgcctgac cgcccgtggc agccggg
//
LOCUS       DATILV010000698         4361 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4769116, whole genome shotgun sequence.
ACCESSION   DATILV010000698 DATILV010000000
VERSION     DATILV010000698.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4361)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4361)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4361
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4769116"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            184..510
                     /locus_tag="VLJ17_16600"
     CDS             184..510
                     /locus_tag="VLJ17_16600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24634.1"
                     /translation="MMHRLAKRLFVLAMVIHFVPSAAFADRLVDGVPIPDDAKVMPPS
                     LALPESQQRFLGAWVGRWGDALKHILIVESVQARWQRQCHLRLGRQSGPEHHARLYTA
                     WRKRQW"
     gene            614..1450
                     /locus_tag="VLJ17_16605"
     CDS             614..1450
                     /locus_tag="VLJ17_16605"
                     /inference="COORDINATES: protein motif:HMM:NF014215.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV24635.1"
                     /translation="MEKVDLAALIASGKKFAESIMISTKLWENGKPVRLEVVIDKPPG
                     DGPFPLLVFNHGSTGQGNDPALFTQSFSNPAFAEMFVKKGYMVAFPQRRGRGKSEGLY
                     DEGFNVDRNQGYACDPKLSLPGADRALTDIAAAVEVLRQRPDVARRPILMAGISRGGI
                     LSIAYAGMYPREVAGVINFVGGWMAEGCPNAREVNGTLFERGGTFRHPTLWLYGNHDP
                     FYSLDHSRANFAAFQATGGMGSFFDFEVPGGDGHRVMFSPPLWTDHVDRYLDSIAAVA
                     KQ"
     gene            complement(1654..2649)
                     /locus_tag="VLJ17_16610"
     CDS             complement(1654..2649)
                     /locus_tag="VLJ17_16610"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV24636.1"
                     /translation="MRACRPELVVFLIALAGTASLAEDYSSRQDDYPSRNVTFVVPYQ
                     AGGATDLMARLVGQRLEQRLGKHFVVENRPGAGTVLAAAYVTRQPADGYTILLGTSTT
                     MAINVTLHKSLPYDPTKDLVPVAMLAGVPFLLVVNPTLPINSVAELVSYAKANPETLT
                     YASNGQGGGTHLFAELLKRATGITATHVPYKGVAPALNDVVAGHVSMTFGDFGTTLPL
                     VRAGKLRALGGSSAQHVAAAPDIVPLAEAGIPGFDVTSWQMVVAPAGLPKEILYKLNA
                     ELRTIVSEPRFSEELAGKGMIPLVTAPPIELQAYVRSEITRWSEVVKQAGVASSE"
     gene            complement(2777..3016)
                     /locus_tag="VLJ17_16615"
     CDS             complement(2777..3016)
                     /locus_tag="VLJ17_16615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24637.1"
                     /translation="MLEPGSLKCLPHQTHGWQLTQALYSSLAISEDPRPFLEFSHNIA
                     TLLLPDKLKGATAELTLMPNLGPPAERWLADFQAR"
     gene            3046..>4361
                     /gene="kaiC"
                     /locus_tag="VLJ17_16620"
     CDS             3046..>4361
                     /gene="kaiC"
                     /locus_tag="VLJ17_16620"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="circadian clock protein KaiC"
                     /protein_id="HSV24638.1"
                     /translation="MADKMRAKPGDLATIGKSPTGIRGLDEVTQGGLPQGRPTLLCGS
                     AGCGKTLFGMTFLYNGAVECNEPGVFIAFEEQPEDLIKNVGTLKYDIEKLIAEKKFAI
                     DHIEIERTKIAESGEYDLEGLFIRLAFAIDSISAKRVVVDTIETLFSGLENEQLLRSE
                     LRRLFEWLKAKGVTAIITGERGEGTLTRYGLEEYIADCVILLDNRLHDQLSTRRLRVI
                     KYRGSAHGTNEYPFIIDEHGITVMPITSSGLAHEASTERVPSGIPDLDQMLEGKGYYK
                     GSSILVSGMAGSGKSIVAAHFVDATCASGHRCIYFAMEESPHQIIRNMRSIGIDLQKW
                     VDKKLLRFCARRPSLLGLETHLATMYRDVADFEPAAVVIDPISALLSAGMTGDVHSMV
                     LRLADFLKGRGVTALFTNLGVVSGENATTEIQISSLIDVWLSLYNR"
BASE COUNT          847 a         1332 c         1329 g          853 t
ORIGIN      
        1 tctcgagtgg cctgagggcg aacgacggcc cccacgctcg tggcagcgtc tcagatcggg
       61 ccgtcgcctg aaacccttat aaccccggac tcatgcactg caaaaaatgg cgacggccct
      121 tccgcctgct cgcgacactg atgtagcctt taatcacggc ctttgccgca cccggggagg
      181 gcgatgatgc atcggcttgc gaagcggctt tttgtcttgg ccatggttat tcactttgtc
      241 ccaagcgcgg catttgcgga ccggctggtc gacggcgtgc cgatccccga tgatgccaag
      301 gtcatgccgc cttccctcgc gctaccggaa agccagcagc ggtttttggg ggcctgggtc
      361 ggccgctggg gcgacgcgct caagcacatc ctgatcgtcg agagcgtgca agctcgatgg
      421 cagcgccagt gtcatctacg gttggggaga cagtccgggc ctgagcatca cgcgcggctt
      481 tatacggctt ggcgcaaacg tcagtggtga taccctcacc atcgagagtt cttttaccgc
      541 gacctacaag ctgacctccg caacctcggc tacggcatta cgtcggcgcg gagagagccg
      601 cgctcaggcc gacatggaga aggtcgatct tgcggctctg atcgcttccg gcaagaaatt
      661 cgcagagtcg atcatgatca gcacgaagct gtgggaaaac ggcaagcccg tccggctcga
      721 agtggtcatc gataagccgc cgggcgacgg gccgttcccg ctgctggtgt tcaatcacgg
      781 ttccaccggc cagggaaacg acccagcgct tttcactcaa tccttttcca atcccgcgtt
      841 cgccgagatg ttcgtcaaga agggctacat ggtcgccttc ccgcaacggc gcggccgtgg
      901 caagtcggag gggctctacg acgaaggatt caatgtcgac cgcaatcagg gttatgcctg
      961 cgacccgaag ctgtccctgc cgggcgctga ccgcgcgctg accgacatcg ccgccgctgt
     1021 cgaggtgctg cgacagcggc ccgacgtggc ccggcggccg attctcatgg ccggaatctc
     1081 acgcggcggc atcctttcga tcgcctacgc cggaatgtac ccgcgcgagg tcgccggcgt
     1141 gatcaatttc gtgggcggct ggatggccga aggatgcccg aacgcgagag aggtcaacgg
     1201 cacgctgttc gagcgcggcg gaacgttccg gcatccgacc ttgtggctct acggcaacca
     1261 cgaccccttc tacagccttg accacagccg cgcgaacttt gcggcgttcc aggcgacggg
     1321 tggtatgggt tcgttcttcg acttcgaggt gccgggcggg gacgggcaca gggtgatgtt
     1381 ttccccgccc ctctggaccg accatgtcga ccgctatctc gactccatcg ccgcggtggc
     1441 gaaacagtag cggtcgatgc tgtcgaaaaa gggttttctg gcaggtgaac taaaactcaa
     1501 ctgtcatctc atcagaattg caggcgagat atggtgacgg gcaacaccgc taacgcccaa
     1561 ctcgtcagcg tcgtcgaggg tgacaccttc gtcgacgtcg gcgccgcaac cgcaagggtg
     1621 cgcattcgct ccccttgtcg gcgcgcagtt tattcattcg ctgctggcga cgcccgcctg
     1681 tttcaccacc tcgctccagc gagtgatctc ggatctgaca taggcctgca actcgatcgg
     1741 cggggccgtc accagtggga tcatcccttt gccggcgagt tcttcggaaa agcgtggctc
     1801 cgatacgatc gtgcgcaatt cggcattgag cttgtacagt atctccttgg gcaggccggc
     1861 aggcgccacc accatctgcc aagacgtcac gtcgaagcct ggaataccag cctccgcgag
     1921 cggcacgatg tccggcgccg ccgccacatg ttgtgcgctc gacccgccga gcgcacgcaa
     1981 tttgccggca cgaaccaagg gcagtgtggt gccgaagtcg ccgaacgtca tcgacacatg
     2041 ccccgccacc acatcgttga gtgccggcgc gacgcccttg tagggcacat gggtcgccgt
     2101 gattccggtc gctcgcttga gcagttcggc aaacagatgg gtgccgccgc cttggccatt
     2161 cgacgcatag gtcaaggttt cggggtttgc cttcgcgtaa gaaacgagtt cggcaaccga
     2221 gttgattggc agcgtcggat tgacgaccag caggaacggc acccctgcca gcattgcgac
     2281 cggcaccagg tccttggtgg gatcgtaggg caggcttttg tggagcgtga cgttaatcgc
     2341 catggtggta ctggtgccca gcaagatggt gtagccatcg gccggctgcc tcgtcacata
     2401 ggcggcggcc agaacggtgc cggcaccggg ccggttctcc accacgaagt gcttgccgag
     2461 ccgttgctcc aagcgttggc cgacgagcct cgccatcagg tcggtggcgc cgcccgcctg
     2521 gtagggaacc acgaaggtaa cgttgcgcga agggtagtcg tcttgacgcg aggagtagtc
     2581 ttcagccaac gacgcggtac cggccagggc gataaggaag accacaagtt cgggacgaca
     2641 cgcgcgcata gtcgacctac ccaattgcgt gttggcgatg ccgcattacc tgcatgatat
     2701 ggcgcagttg gggccattgt aagcccgaga tgccggcctg ccgcacaatc tttgccgaac
     2761 gctttcccct ccgatttcac ctagcctgga aatcggcgag ccagcgctcg gcaggaggtc
     2821 caagattcgg catcagcgtg agttccgccg tggcgccttt caatttatcc ggaagcagca
     2881 gcgtggcgat attgtgtgag aattctagaa acggccgcgg atcttcggaa atagccaagg
     2941 aactatagag cgcttgggtg agttgccagc cgtgggtttg atgtggcaag catttcagac
     3001 tgcccggctc cagcaaataa cagtagagtt ggaggaggga atttcatggc cgacaagatg
     3061 cgcgcaaaac ctggcgattt ggccactata ggcaaatcac caaccggcat tcggggtctc
     3121 gatgaggtga cccaaggcgg cctcccgcag ggccgaccga ccttgctttg cggctcggcc
     3181 ggctgcggca agaccttgtt cggtatgacc ttcctctaca acggcgcggt cgaatgtaac
     3241 gagcccggcg tcttcattgc cttcgaggag cagcccgaag acctcatcaa gaacgtcggt
     3301 acgctcaagt acgacatcga gaagctaatc gccgaaaaga agttcgccat cgaccacatc
     3361 gagatcgagc gtaccaagat cgccgagtcg ggcgaatatg atctcgaagg ccttttcatc
     3421 cgcctcgctt ttgccataga ctcgatcagc gctaagcgcg tcgttgtcga caccatcgag
     3481 acgctgttca gcggcttgga aaacgagcag ctgcttcgct ccgagttgcg ccgacttttc
     3541 gagtggctca aagcgaaggg cgtaaccgcc atcatcaccg gcgagcgcgg cgaaggcacg
     3601 ctgacgcgct atggattgga agaatacatc gccgactgcg tgatcctgct cgacaaccgg
     3661 ctccacgatc agctttcgac gcgccgcctg cgcgtcatca aatatcgcgg ctcggcccac
     3721 ggaaccaacg aatacccgtt catcatcgac gagcatggca ttaccgtgat gcccataacg
     3781 tcgagcggtc tcgcccacga ggcgtcgacc gagcgtgtgc cgagcggtat ccccgatctc
     3841 gaccagatgt tggagggcaa gggctactac aaaggctcca gtatcctcgt atccgggatg
     3901 gccggcagcg gcaaatcgat tgtggccgca catttcgtcg atgcgacctg cgcgtccggt
     3961 catcgttgca tctatttcgc gatggaagaa tcgccgcatc agatcatccg caacatgcgt
     4021 tcgatcggca ttgacctgca aaagtgggtc gataagaaac tgctgcggtt ctgcgcgcgg
     4081 cggccgagcc tattgggtct cgaaacccac ttggcgacca tgtaccgcga cgtggccgat
     4141 tttgagccgg ctgcggtcgt cattgaccct atatcggcat tgctgagcgc cggcatgacc
     4201 ggcgatgtgc actcgatggt gcttcgcctg gccgatttcc tcaaggggcg cggcgtcacg
     4261 gcgctgttca ccaatctcgg cgtcgtttcg ggcgagaacg ccacgaccga gattcagatt
     4321 tcatcgctga tagacgtctg gctgtcgctt tacaaccgtg a
//
LOCUS       DATILV010000699         3054 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4769155, whole genome shotgun sequence.
ACCESSION   DATILV010000699 DATILV010000000
VERSION     DATILV010000699.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3054
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4769155"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..279)
                     /locus_tag="VLJ17_16625"
     CDS             complement(<1..279)
                     /locus_tag="VLJ17_16625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal-associated domain-containing
                     protein"
                     /protein_id="HSV24639.1"
                     /translation="MSCCDSEAEFGLRAPDERATGDEVLLASRVVADGVRQTDLSVPT
                     VHCGACIRAVEMALGALAGVESARVNLSTRRVTVRWRSKGPPPPFVETL"
     gene            complement(310..1095)
                     /locus_tag="VLJ17_16630"
     CDS             complement(310..1095)
                     /locus_tag="VLJ17_16630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015596746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2189 domain-containing protein"
                     /protein_id="HSV24640.1"
                     /translation="MTTIPAVVPPLPREWTWKRNVSPAAAFGWLSAGWRDFTIHPVAS
                     ISYGLLVFLVSVATIVGLFALHRDYILFPALAGFMVVGPMIGIGLYEKSRRIEESKPV
                     SLWHMIFVKPESGGQILFAGVLLLSLLLLWMRAAVILYALFFGLRPFPGLDHIVAMLF
                     TTEIGWAMLLVGSAVGGLFAAFSFAISAFAIPMLLAERTDALTAMGTSMALVWNNLQV
                     MLTWAAIMLALIFFGIVTGLLGMIVVFPVLGHGSWHAYRTMRH"
     gene            complement(1321..2202)
                     /gene="ccoP"
                     /locus_tag="VLJ17_16635"
     CDS             complement(1321..2202)
                     /gene="ccoP"
                     /locus_tag="VLJ17_16635"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit III"
                     /protein_id="HSV24641.1"
                     /translation="MAVDERDPYTGYMTTGHEWNGIKELNSPVPRPVYFFLIVAGVFS
                     VIYWILMPAWPLGVTYTKGLLGIDQRVTVSESLKQAALERGIWTGRIESESFKDIQAD
                     SRLMDMVRQTGRTLFGDNCAACHGSNAKGGKGFPNLTTASWLWGGDPENIAETIRVGV
                     NSAHPQTRTSQMMAFGRDQILKKDEIDNVVTYLRSLSDPAIGKEVSATKIDAGKAVFA
                     ANCVACHGDDAKGKADLGAPNLTDRFWIYGGDAESVYTTVWGGRQGHMPSWEGRLSPL
                     DRKILALYLIDLRGEER"
     gene            complement(2193..2378)
                     /locus_tag="VLJ17_16640"
     CDS             complement(2193..2378)
                     /locus_tag="VLJ17_16640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015596744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit 3"
                     /protein_id="HSV24642.1"
                     /translation="MIMDHDFVVWFSKSFGLFYLIALSIGIVAYAYWPSNKRKFDEAA
                     QSILGHDDRPHKDQPWR"
     gene            complement(2375..3052)
                     /gene="ccoO"
                     /locus_tag="VLJ17_16645"
     CDS             complement(2375..3052)
                     /gene="ccoO"
                     /locus_tag="VLJ17_16645"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit II"
                     /protein_id="HSV24643.1"
                     /translation="MIGVASIGGAVEIIPLFTIHQTVEDAPSMRVYTPLEIAGRNIYI
                     REGCYACHSQMIRTLRDEVERYGPYSLAVESKYDHPMLWGSKRTGPDLARMGNKYSDE
                     WHVRHFNNPRDLVPESVMPQYSWLGRTELRSDDLGAHLAALRKVGVPYTDDMIANARS
                     DTYGQAAPDTPFAEGVTKRYGEATNVRVFDGKPGELTELDALVAYMQVLGKLTDAAHK
                     PGAAAGG"
BASE COUNT          655 a          941 c          866 g          592 t
ORIGIN      
        1 gagcgtttcg acgaacggcg gcggaggccc cttcgagcgc cacctgacgg tcacgcgtct
       61 ggtcgaaaga ttgacgcgtg cgctttccac accggcaagc gcgccgagcg ccatttcgac
      121 tgcccgaata catgcgccgc aatgaaccgt cggcaccgac aggtcggtct gtcgcacgcc
      181 atcggcgact actcggcttg caagcagtac ttcgtcgcct gtcgcgcgct catccggcgc
      241 acgtaatccg aactccgctt ccgaatcgca acaactcatc ggagaaactc caaatgtcgt
      301 gcgctgaact cagtgacgca tggttcgata tgcgtgccag cttccatgcc ccagcaccgg
      361 gaacacgacg atcattccca aaaggccggt tacaatgccg aaaaaaatca gcgcaagcat
      421 gatcgccgcc catgtcagca taacctgcag attattccag accagcgcca tgctcgtgcc
      481 catggcggtc agcgcatcgg tacgctcggc cagcagcatc gggatagcga aggcgctgat
      541 ggcaaatgag aacgccgcga acaatccgcc gacggcgctg ccgaccaaga gcatcgccca
      601 accgatctcc gtggtgaaca gcatggcaac gatatgatcg aggccgggga acggacgtag
      661 cccgaaaaac agcgcataga ggatgaccgc cgcacgcatc cacagcagca gcagagaaag
      721 aagtagcacg ccggcgaaca aaatctggcc acccgattcc ggcttgacga atatcatgtg
      781 ccagaggctg acgggtttgc tttcctcaat gcgccggctc ttttcgtaaa gtccgattcc
      841 gatcatcggt ccgacgacca tgaagccggc aagcgccggg aacagaatgt agtcccggtg
      901 gagggcaaac agaccgacga tcgtggcgac cgatactagg aataccagca acccgtaact
      961 gatgctggct acaggatgaa tcgtgaagtc tcgccagccg gccgatagcc aaccgaatgc
     1021 agctgcggga gagacgtttc gcttccaggt ccactctcgc ggcagaggcg gaacaacagc
     1081 cgggatcgtc gtcatcgtcg gtctccgtgc aatctcatcg cggtgtgcat gacgagcttg
     1141 ccgcgctgaa ccttccttcc attggagcgc cctggccccg gtgcacatgc gccacgcact
     1201 ccggttgcga tgtgatggcc atgtaaacga gatgcgaatt tgcgatcaac agcagcaaca
     1261 acccggcgac gatcgcaaga acggcctttg ctttgacatg cttcgtcgct gcgactccgt
     1321 tcatcgttcc tcccctcgga gatcgatcag atagagcgca agaatcttgc gatcgagcgg
     1381 agagagcctt ccctcccaac tgggcatatg gccctggcgg ccaccccaca ccgtcgtgta
     1441 gaccgactca gcatcgccgc cgtagatcca gaaccgatcc gtcaggttcg gcgcgccgag
     1501 atcggctttg cccttggcgt catcgccatg gcaggcgacg cagttggcgg cgaaaacagc
     1561 cttgccggca tcgattttcg ttgccgaaac ttccttgccg atagcggggt cggagaggct
     1621 gcgcaggtag gtgacgacgt tgtcgatttc atccttcttg agtatctgat cgcgcccgaa
     1681 cgccatcatc tgcgacgtcc tggtctgcgg atgagcggaa ttgacgccga cgcggatggt
     1741 ttctgcgata ttttcgggat cgccgcccca cagccacgac gccgtcgtca ggttcgggaa
     1801 tcccttgcca cccttcgcat tcgacccgtg gcacgccgca cagttgtcac cgaacaatgt
     1861 ccggccggtc tgccgcacca tatccatcaa tcgggaatcc gcctggatgt ccttgaagct
     1921 ttcggactcg atgcgcccag tccagatgcc acgttcgaga gcggcctgtt tcagactttc
     1981 gctgacggtg acgcgctgat cgatgccgag caggcccttg gtataggtca ctccaagcgg
     2041 ccacgcgggc atcagtatcc agtagatgac ggagaacacg cccgctacaa tcaggaagaa
     2101 atagaccggc cgaggcactg gcgagttcaa ttctttgata ccgttccact cgtgaccggt
     2161 ggtcatgtag ccggtatagg gatcgcgctc gtctaccgcc atggttgatc cttgtgcggt
     2221 ctgtcatcat ggccaagaat cgattgggcc gcctcatcga acttcctctt gttcgagggc
     2281 cagtacgcat aggcgacgat gccgatcgag agtgcgatca gatagaacag tccgaatgat
     2341 ttcgagaacc aaacaacaaa gtcatggtcc atgatcaccc tcccgccgcg gcgccaggct
     2401 tgtgcgcggc gtcggttagt ttgccgagaa cctgcatata agcgaccagg gcatcgagct
     2461 ccgtgagttc acctggtttg ccgtcgaaga cacgcacgtt ggtcgcttcg ccatatcgct
     2521 tggtgactcc ttcggcaaaa ggtgtatcgg gtgccgcctg tccgtaggta tccgacctcg
     2581 cattggcgat catgtcatct gtatagggca cgccgacctt gcgaagcgct gcaagatgcg
     2641 caccgaggtc gtcgctacgc agttcagtgc gtccgagcca tgaatattgc ggcataaccg
     2701 attccggcac gagatcgcgc ggattgttga agtgcctcac atgccactcg tcagagtatt
     2761 tattgcccat acgcgcgaga tccggaccgg tccgcttcga tccccagagc atcggatgat
     2821 catatttcga ctcgaccgcg agcgaataag gcccgtagcg ctccacctcg tcgcgcaatg
     2881 tccggatcat ctgcgaatgg caagcgtagc agccctcgcg gatgtagatg ttacggcccg
     2941 caatttcgag cggcgtatag acccgcatgc tcggcgcgtc ctcgacggtc tgatggatcg
     3001 tgaacaacgg gataatctcg accgcgccgc caatactggc cacgccgatg atcg
//
LOCUS       DATILV010000700         5780 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1189817, whole genome shotgun sequence.
ACCESSION   DATILV010000700 DATILV010000000
VERSION     DATILV010000700.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5780)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5780)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5780
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1189817"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            695..2407
                     /locus_tag="VLJ17_16650"
     CDS             695..2407
                     /locus_tag="VLJ17_16650"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HSV24644.1"
                     /translation="MATHDGSIRIALLAGSMFACALPAQATEVTPERLLNPDKEPQNW
                     LMNHRTYDGQRYSPLARISRDNVKNLKLAYAVPLGGSAGNEFTNATPLAEDGFLYVTD
                     SWGVLYKVDSTSGDVGRIVWRMDPKQERQLRNRGAALWGNLVITGAGIAPPRIIATNK
                     ETGKVVWETSFPDTPDVTFTSAALPIKDKLIIGGANGDQGVRDWIGALDAATGKLVWR
                     KFTIPAPGEPGSETWKGDTNAWQTGGGAIWVTGTYDPATNQTIWGTGNPVPMFDPFYR
                     PGDNLYTNSAISYDPDNGNMNWYFQFTPGDMWDYDEVGTHILIDGNVAGEARKLITHS
                     ARNGFLYTMDRFNGQTVLAKPYMEVNWTKGIDQKTGKPLDYDPTKDIQTYAGIGNLVP
                     GEPLKRVCPSQAGGNNYWPSSYSPKTKLLYIPALSNCVTITIDREKHNKERGWNGGLS
                     QTEERWESNLTAADPLTGEVKKSVHLRYPNYSGTLATGGGLVFLALMDGTVAAYDDTT
                     LDELWKINVGSGFSAPPMTFEVNGKQYVAIVSGPSPVSKGRLVNTPELKEQRNALVLH
                     VFGL"
     gene            2586..4292
                     /locus_tag="VLJ17_16655"
     CDS             2586..4292
                     /locus_tag="VLJ17_16655"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HSV24645.1"
                     /translation="MTRGTRSIRNILLTATTLATPVFAADVTPDRLVNADREPQNWLM
                     NHRTYDGQRFSPLTRINRDTVKGLRIAYTVALGGVAANEYVMSTPLAEDGFLYITDSA
                     GVLYKIDGRSGDVGRIVWRMDPGQEKQDRNRGAALWGNLVVTAANWPPRIIATNKDTG
                     KVAWETTFSDTPDVHMTSAPLAVRDKIMVGAAGGDTGVRDWMAGLDAATGKLLWRTYT
                     IPAPGEPGSETWKDKNNAWQTGGGAVWVTGTYDPGTHQTIWGTGNPVPMYDPTYRPGD
                     NLYTNSAISYDPDSGKMNWYFQYTPGDMWDYDEVGTHILIDRELAGQARKLITHSARN
                     GFLYTMDRHNGQIVGAKPYLDNINWTKGIDQKTGKPLDYDPNKDIQTYSGLANQNPSE
                     PMKRACPGHAGGNNYWPSAYSPRTKLVYIPALSNCEDISIDTTKHSKEKGWNGGAFKT
                     TERYESNLTAMDPVTGEVKKNVHLRYPNYAGALTTGGGLVFIALLDGTVAALDDTTLE
                     EVWKFNVGAGITTPPMSFEVNGKQYVAIASGASTSSRARLINTPELKDLRNVTMLYVF
                     GL"
     gene            4493..5614
                     /locus_tag="VLJ17_16660"
     CDS             4493..5614
                     /locus_tag="VLJ17_16660"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HSV24646.1"
                     /translation="MTTRIRFTRTVLLAAAMLASPAFAADVTPERLLNPDKEPQNWLM
                     NHRTYDGQRFSPLSRINKDNVKGLRLAYAIPLAGTQGKEFIEATPLAEDGFLYITDSW
                     GVLYKIDATAGDIGRIVWRMDPKQNRQAANRGAALWGNLVISPSSGPARIIATEKNTG
                     QVVWEANVSDAERITITGAPLPIKDKIIIGASGGDAGARDWIAALDAATGKLLWRQYT
                     IPAPGEPGSETWKDKNNAWQTGGGAVWVTGTYDPDSNQTLWGVGNPVPMMDARLRPGD
                     NLFTNSVVSWDPDTGKMNWYFQYTPGDMWDFDEVGTHILIERTINGQPRKLVTHSARN
                     GFVYTMERNNGNGRRQALHGSQLDQGYRPEDRQADRLRP"
     gene            5550..>5780
                     /locus_tag="VLJ17_16665"
     CDS             5550..>5780
                     /locus_tag="VLJ17_16665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent dehydrogenase, methanol/ethanol
                     family"
                     /protein_id="HSV24647.1"
                     /translation="MEVNWTKGIDQKTGKPIDYDPNKDVQTYSGMADPTSENPVKKVC
                     PNRTGGNNYWPSAYSPKTQLLYIPAMTACEFVT"
BASE COUNT         1276 a         1791 c         1700 g         1013 t
ORIGIN      
        1 gttacagtcg ttttgtcgct atctacaata tattgcagct gaggcggaac gcgcgcaagg
       61 tcgatggttc ccgatcttgg cgtctagccc aggtccccca gccgaccgta gtccctgtag
      121 gaaacctccg ctgcgtagga aaatgctctg ctacggctgc gtcgcaagtt gtcaaagcca
      181 gcaacgacgc gaattttgcc ggaagtcggc gcacatgcag gggcgtcgtt tggtttatga
      241 cgcagtcgca ctgacttgtg gccgagcacc catcctacac caacgaaaca cgatacatgc
      301 ctttcgcacc ttggcgactc tagagcccaa ccacccttac attgcgcgca aatattatgg
      361 caccaccgca gaataatgta catcgcattg tgcgagcgca caataccctc gccgctcgcc
      421 aacgctatgc gctaacccat cgaccgatgt catgcatctg tcgcagacgc agcatttcaa
      481 tttgtgagtc tgcgattcca ctcccgacgg acccatgatc ggctgaacat gagtagcgaa
      541 gcgcccgtcc tgatggctct tgcgccgctc taccaaatcg agaatccaga aacaacgccg
      601 tcgtgaccct acggacatcg cctttcggtt gatgtacact cgcccaaaag cctacgtcgc
      661 aaccggacgg cgagcgattg caagggaggg attgatggca acacacgacg gttcgattcg
      721 catcgcgctg ctggcgggca gcatgttcgc ctgtgctcta ccggcgcaag ccactgaggt
      781 cacgccggag cggctcctca atcccgacaa ggagccgcag aattggctaa tgaatcatcg
      841 tacttatgac ggccagcgct attcgccgct cgcccgtatc agccgggaca atgtcaagaa
      901 cctcaagctc gcctatgcgg tgccgctggg cggcagcgcc ggcaacgaat tcacgaatgc
      961 cacgccgctt gcggaggacg gcttcctcta tgtgacggat tcctggggtg tgctctacaa
     1021 ggtcgacagc acttcgggcg atgtcggccg cattgtttgg cgcatggatc cgaagcagga
     1081 gcgccagctt cgtaaccgcg gcgcggcact gtggggcaat cttgtcatta ccggcgccgg
     1141 catcgccccg ccgcggatca tcgccaccaa caaggagacc ggcaaggtgg tgtgggagac
     1201 ctccttcccg gacacgccgg acgtgacgtt cacgtcggcg gcgcttccta tcaaggacaa
     1261 gctcatcatt gggggcgcca atggcgacca gggcgtgcgc gactggatcg gggcgctcga
     1321 tgccgcgacc ggcaagctgg tgtggcgcaa gttcacgatt cctgcgcccg gcgagccggg
     1381 cagcgagacc tggaagggcg acaccaatgc atggcagacc ggtggcggcg ccatctgggt
     1441 gaccggcact tatgatccag ccaccaatca gacgatctgg ggtaccggca atccggtacc
     1501 gatgttcgat ccgttttacc ggccgggcga caatctctac accaacagcg cgatctccta
     1561 cgatcccgac aatggcaaca tgaactggta tttccagttc acgcccggtg acatgtggga
     1621 ctacgacgag gtcggcaccc acattctgat cgacggcaat gtcgcgggag aagcgcgcaa
     1681 actcattacg cattcggcgc gcaatggctt cctttatacg atggaccggt tcaatggcca
     1741 gactgtgctg gcgaagccct acatggaggt caactggacg aagggcatcg accagaagac
     1801 tggcaagccg ctcgactacg accctaccaa ggatatccag acctatgcgg gaatcggtaa
     1861 cctggtgccg ggcgagccgc tcaagagggt ctgtccttcc caggccggcg gtaacaacta
     1921 ctggccgtca tcctatagtc cgaagacgaa actcctgtac atcccggccc tgtcgaactg
     1981 cgtcaccatc acgatcgacc gcgagaagca taacaaggag cgcggctgga acggtgggct
     2041 gagccagacc gaggagcgtt gggagagcaa cctcaccgcc gccgatccgc tgaccggcga
     2101 ggtcaagaaa agcgtccatc tgcgctaccc caattattca ggcaccctgg cgaccggcgg
     2161 cgggctcgtg ttcctggcgc tgatggacgg aacggttgcg gcttatgacg acaccacgct
     2221 cgatgagctg tggaagatca acgttggctc cggtttctcg gcgccgccga tgacgttcga
     2281 ggtcaacggc aagcaatatg tcgcgatcgt gtcggggccg agcccggtct cgaaagggcg
     2341 gctcgtcaac acgccggagc taaaggagca gcgcaacgct ctggtgctcc atgtatttgg
     2401 gctgtgaacg gtaaccccta ggacaggcaa aatcgcatgc cgcagcccat gattttgtga
     2461 gcgcatcgtt gtgtacgctg tgggcattgg gccaacgtac cgcataaagt tggtgtggcc
     2521 gtgtgagcgc aatgcctcac cgtaaatgtc gggttcgcgg caaattgcaa acaccggagg
     2581 aaaccatgac gagaggcacc cgatcgatcc gcaacattct gctcaccgcc accacgctgg
     2641 caacaccggt cttcgcggca gacgtaacgc ccgatcggct cgtcaatgcc gacagggagc
     2701 cgcaaaattg gttgatgaac caccgcacct atgacggcca gcgcttctca ccgctcacac
     2761 gtatcaaccg tgacaccgtc aagggcttgc ggattgctta cacggtagcg ctcggcggcg
     2821 tagcggccaa cgaatacgtg atgtcgaccc cgctcgcgga ggacggcttc ctctacatta
     2881 cggactcggc gggagtcctc tacaagatcg acggccgctc gggcgacgtc ggccgcatcg
     2941 tgtggcggat ggaccccggg caggaaaagc aggaccgtaa ccgcggcgcg gccctgtggg
     3001 gcaatctcgt cgtcaccgcc gccaactggc cgccgcgcat catcgcgacc aacaaggaca
     3061 ccgggaaggt cgcgtgggaa accacgttct cggacacgcc ggatgttcat atgacgtcgg
     3121 cgccgctcgc cgtcagggac aagatcatgg tcggcgcggc cggcggtgac acgggggtgc
     3181 gcgactggat ggcggggctc gatgccgcga ccggaaagtt gctgtggcgt acatatacga
     3241 ttccggcgcc cggtgagccc ggcagcgaga cctggaaaga taagaacaat gcctggcaga
     3301 ccgggggcgg tgccgtctgg gtcaccggca cctacgatcc gggcactcac cagaccatct
     3361 ggggcactgg caacccggtg ccgatgtacg atccaaccta tcggccgggc gacaacctct
     3421 acaccaacag cgccatttcc tacgatcccg acagcggcaa gatgaattgg tacttccagt
     3481 acacgcccgg cgacatgtgg gactacgacg aggtcggcac tcacatcttg atcgaccgcg
     3541 agctggcagg ccaagcgcgc aaactcatca cccattcggc acgcaacggc ttcctctaca
     3601 ccatggatcg ccacaacggt cagattgtcg gcgcaaagcc ctatctggac aacatcaact
     3661 ggaccaaggg tatcgatcag aagaccggca agccgctcga ctacgatccc aacaaggata
     3721 tccagaccta ttcggggctc gccaatcaga acccgtcaga gccgatgaag agagcctgcc
     3781 ctggccatgc aggcggcaac aactactggc cttcggccta cagcccgagg accaagctgg
     3841 tgtacatccc ggcgttgtcg aattgcgagg acatatcgat cgacacgacc aagcacagca
     3901 aggagaaagg ctggaacggt ggcgccttca agaccaccga gcggtacgaa agcaatctta
     3961 ccgccatgga cccggtgacc ggcgaggtca agaaaaacgt acatctgcgc tatccgaact
     4021 acgccggtgc gctcacgacc ggtggcggac tcgttttcat cgcgctcttg gacggcaccg
     4081 tcgcggccct cgatgacact acgcttgaag aggtgtggaa gttcaacgtg ggtgcaggga
     4141 tcaccacgcc gcccatgagc tttgaggtca acggcaagca atatgtggcg atcgcgtcgg
     4201 gagcgagcac gtcatcgaga gcacgtctca ttaatacgcc ggagctcaag gacctgcgca
     4261 acgtcaccat gctttatgtg ttcgggctgt aggtcacgct ttagtcgtcg caggatggag
     4321 ttgcggagtt atcgggctcc gaagggtggc tcaacccgtc gaacttcgac gcgctgcggc
     4381 gcaatcgtgg agagccttac cgcagacggg tccttcctgg cactacgcac cggctggtcg
     4441 gtgctccatg taggctacca gtcgtgccga attcgcaaat gggaggaaca tcatgactac
     4501 acgcatacgc ttcactcgca ctgtgctgct tgctgccgcc atgctggcgt cgccggcgtt
     4561 cgccgccgac gtgacgccgg agcggctcct caatcccgat aaggagccgc agaattggct
     4621 gatgaatcac cgcacctatg acggtcagcg cttctcgccg ctcagccgca tcaacaagga
     4681 caacgtcaag gggctccggc tcgcgtacgc gatcccgctc gcgggcacgc agggcaagga
     4741 atttatcgaa gcaacgccgc ttgcagaaga cggtttcctc tacatcacgg actcctgggg
     4801 cgtactctac aagatcgatg ccaccgccgg agacatcggc cgcattgtct ggcgcatgga
     4861 tccgaagcag aaccggcagg ccgccaatcg gggtgcagcc ctgtggggca atctggtcat
     4921 ttcgccatcg agcggcccgg cacgcatcat cgctaccgaa aagaacaccg gccaagtcgt
     4981 gtgggaagcg aatgtatctg atgcggaacg gatcaccatc acaggggctc ctctccccat
     5041 caaggacaag atcataatcg gagcctccgg tggcgacgct ggtgcccgcg actggatagc
     5101 cgcgctcgac gccgcaaccg gcaagctcct atggcgccaa tacaccattc cggcgccggg
     5161 cgagcccggc agcgaaacct ggaaagacaa gaacaacgca tggcaaaccg gaggcggcgc
     5221 cgtttgggtt actggtacct atgatccgga ctctaaccag acactgtggg gcgtcggcaa
     5281 cccggtgccg atgatggatg caagattgcg tccaggcgat aacctgttca ccaacagcgt
     5341 ggtgtcgtgg gaccccgaca ctggcaagat gaactggtac ttccagtaca ccccgggcga
     5401 catgtgggat tttgacgaag tcggcaccca tatcctgatc gagcgcacca tcaacgggca
     5461 gccgcgcaag ctcgtcaccc attccgcacg taacggtttc gtctacacca tggagcgcaa
     5521 caacggcaat ggtcggcgcc aagccctaca tggaagtcaa ctggaccaag ggtatcgacc
     5581 agaagaccgg caagccgatc gactacgacc ctaacaagga tgtccagacc tattcgggca
     5641 tggccgaccc gacctcagag aatccagtta aaaaggtctg cccgaatcgt accggcggca
     5701 ataactattg gccgtccgcc tacagcccga agacccagct cctctacatt cctgcgatga
     5761 cggcgtgtga attcgtcaca
//
LOCUS       DATILV010000701         1727 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1704043, whole genome shotgun sequence.
ACCESSION   DATILV010000701 DATILV010000000
VERSION     DATILV010000701.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1727)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1727)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1727
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1704043"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            85..1200
                     /locus_tag="VLJ17_16670"
     CDS             85..1200
                     /locus_tag="VLJ17_16670"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HSV24648.1"
                     /translation="MSTYAFESEHRIICTYCETGVWQFASVDTETRRLEALNVPYTEI
                     SSVQAAQNRAVFCGASPSATTAIIDLDLGTRELKPLRQSSSIEVDSAYLSVPRAVEFP
                     TENSLTAHAFFYAPSNADYRAPEDERPPLIVISHGGPTHAGAAALKLGIQYWTSRGFG
                     VLDVNYGGSTGFGTEYRRRLNGQWGVVDVDDCVNGARYLVERGEADGDRLIIRGGSAG
                     GYTTLAALTFRNVFKAGASYYGISDIELLEQDCHKFESRYNVSLVGPYPERKDLYFER
                     SPIHFTERLSCPIILFQGLEDKVVPPNQAEMMYEAALKKGLPVAYVAFEGEQHGFRKA
                     ENIKRSLDGELYFYSRVFGFELAEPVEPVAIENLSET"
     gene            complement(1323..>1727)
                     /locus_tag="VLJ17_16675"
     CDS             complement(1323..>1727)
                     /locus_tag="VLJ17_16675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24649.1"
                     /translation="ASDGAHNQASCSFTVTVRDAEAPVIAGGTANPSTLWPPNTDMIN
                     VTISYSVADNCTPSANVVCDLTVSSNEPPVPPGNPHSSAEWTVIDAHHVQLRSDRNGD
                     GGGRIYTVTISCTDSSGNTATKTVAVTVPHNQ"
BASE COUNT          356 a          478 c          506 g          387 t
ORIGIN      
        1 aacctttatc gtatgaatga caccggcgtc gaggcgctat gtgaaaagaa catcgagttc
       61 ggagcgccgc aatgggtttt ccgcatgtcg acctacgcct tcgaatcgga gcatcgcatc
      121 atttgcactt attgcgaaac cggcgtctgg cagtttgcga gcgtcgatac cgaaacacgc
      181 agactcgagg cgctcaatgt cccgtatacc gagatctcga gtgtgcaggc agctcagaac
      241 cgcgcggtgt tctgcggagc atcaccatcg gcaaccaccg cgatcatcga ccttgatctt
      301 ggaacgcgag agctcaaacc gcttcgtcag tcgagcagca ttgaagttga cagcgcttat
      361 ctgtcagttc ctcgagccgt cgagtttcca actgaaaact ctctgactgc gcacgcgttt
      421 ttttatgccc cgtcgaacgc ggattatcgg gctcccgagg atgaacgtcc gccgctgatc
      481 gtaattagtc atgggggccc gacacacgcg ggcgctgctg ccctcaagct gggcattcag
      541 tactggacga gccgcgggtt cggcgtgctt gatgtgaatt acggcggaag caccgggttc
      601 ggcaccgagt accggcgacg gcttaacggg cagtggggag tggtcgacgt ggatgattgc
      661 gtgaacggcg ctcgttatct ggttgagcgc ggcgaagcgg acggcgatcg gctgatcatt
      721 cgcggaggaa gtgcaggcgg ctacactacg cttgcggcgc tgacgtttcg caatgtgttc
      781 aaagcgggcg ccagctacta cggcataagt gatatcgagc tcctcgagca ggattgtcat
      841 aagtttgaat cgcgctacaa cgtcagtctg gttggtcctt accccgaacg aaaagacctg
      901 tactttgaac gttcgccgat tcatttcacc gagcgcctgt cgtgcccaat tattctgttc
      961 cagggcctcg aagacaaagt cgtgcctccc aatcaagcgg aaatgatgta cgaagcggcg
     1021 ctcaagaaag gcttaccggt tgcgtacgtc gcgttcgaag gcgaacagca cggctttcgc
     1081 aaggccgaga acatcaagag gtcgctcgat ggggagttgt atttttactc gagagttttt
     1141 gggttcgaat tggcggagcc ggtcgagcct gttgcgatag agaacctctc cgaaacttag
     1201 ctcaaacctc agcgggtcga tgccagcagt cggagccaga tcagctggca atgaaatcct
     1261 cctaacaagg actgaccgcc cccctggcgg tcagtcctct ttgctatcag acgccggccg
     1321 tctcactgat tgtgaggaac ggtcacagca acggtcttcg tggcggtgtt accgctgctg
     1381 tccgtgcaac tgatcgtgac cgtgtagatg cgaccgcctc catctccatt gcggtccgat
     1441 ctcaactgca cgtggtgggc gtctatcact gtccattcgg cagacgagtg tggattgccg
     1501 ggcggaaccg gcggctcgtt actcgacacc gtgaggtcgc atacgacatt cgctgacgga
     1561 gtgcaattgt cagccacgct gtagctgatc gtgacgttta tcatgtcggt attaggaggc
     1621 cacagcgttg acggattagc cgttccaccg gcgatcaccg gcgcctctgc gtctcttaca
     1681 gtcacagtga agctgcaact tgcctggtta tgtgccccgt cgcttgc
//
LOCUS       DATILV010000702         4366 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3748255, whole genome shotgun sequence.
ACCESSION   DATILV010000702 DATILV010000000
VERSION     DATILV010000702.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4366)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4366)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4366
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3748255"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(304..504)
                     /locus_tag="VLJ17_16680"
     CDS             complement(304..504)
                     /locus_tag="VLJ17_16680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24650.1"
                     /translation="MPHVGPVLEGRAFFCPHCGALYSATPSLVPKIEGDTAKCVVCLK
                     VMDSVDTTQFPSFKLIQRPEDA"
     gene            complement(902..1234)
                     /locus_tag="VLJ17_16685"
     CDS             complement(902..1234)
                     /locus_tag="VLJ17_16685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24651.1"
                     /translation="MRGGIGGARGIVVAATEQQINQSAAASPPGGAGTPTADQTIGAQ
                     LHHQPNEAITAMAAQEEIGTETLELNPLVVRFVWRHATYPTGWSTRRQQLLLDDFVVA
                     AEKEVACT"
     gene            1624..3393
                     /locus_tag="VLJ17_16690"
     CDS             1624..3393
                     /locus_tag="VLJ17_16690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012706209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HSV24652.1"
                     /translation="MAEERINRKLAAILAADVVGYSRLMASDEAGTLAALKRHRQMVF
                     EPAVAAHQGRIVKLIGDGTIVEFASVVDAVNCALSVQRSGVSLQDESLHRPRIVLRIG
                     INLGDVIIEGDDIYGDGVNIAARLEPVAEPGGICISSIVNESIGNRIDARFEDGGHIN
                     VKNIDRPIRIWRWHPDAHAPVTDGPRPNAGIPQPHTAIAVLPFTNMSGDPEQEYFSDG
                     ISEDIITDLSKIAGLMVIARNSSFTYKGRSVDVRTIGRELGVQSVLEGSIRRSGNRVR
                     ITAQLIDATSGGHLWGDRYDRDLTDIFEVQDDVTRRIVDALKVTLSPAETERLAKAKT
                     SNLAAYDYLLRGRELMLGKEKNRQTFEQSIACFKKALEHDPDYSQAYACLGFAHIFDY
                     QNRWTDDPDSSLLLVKQYARQAIEKDPNEPLARCVSAMAASFEKDLDRARSEIDVALS
                     LNPNFALAHNLRGSNRIYSGKPLEAIPEIEHGMRLDPALSSQFLHFLGMAYLLARKYE
                     IAAAVLKQRIVLVPRTDFSRALLASALGHLGELEEACRVWGELKEINPNYAFADHVGR
                     LPFRRKEDVERIADGLRKAGLLN"
     gene            3519..4154
                     /locus_tag="VLJ17_16695"
     CDS             3519..4154
                     /locus_tag="VLJ17_16695"
                     /inference="COORDINATES: protein motif:HMM:NF019403.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heparan-alpha-glucosaminide N-acetyltransferase
                     domain-containing protein"
                     /protein_id="HSV24653.1"
                     /translation="MTFRLKTLRRSSQLPKQAILKNTSRQIFEKSPEAKENTASRSRL
                     NSIDFLRGLVMVVMALDHTRDFFAAGGLNPRDVTEPALFLTRWITHFCAPTFVFLAGI
                     SAFLYGTERKTNEVSRYLFTRGCWLVLIEFSVVRFGWTFSFKIGYLVIQVIFVIGASM
                     IVLAAHSDEPKHALSLVQYLRTIGYKAWVEDINGNEIEETALKMAIKSFCD"
BASE COUNT          974 a         1218 c         1236 g          938 t
ORIGIN      
        1 catcgagaga caccgtcccg tcgtgatcgg tatccaagcc tgcgagcaaa tcgggatcgg
       61 aggccgataa tgccggtaac aggggataga aagcgacgcc gaggccagcg aagatcgcaa
      121 tgcgtctcgt gagcatgtgg atggtcttcc tcttggaaga tgcttgtcgc gatagaagtt
      181 actatttttt gccatctgac taaagcggat ttaagccctc ccaaacaatt ccggcaactt
      241 cgcaatgttg accgcaaagc agttggtggc tcaggaccgg cgctccaccg tttgcgaaga
      301 tggtcaggca tcttctggtc gttggatgag cttaaagctc ggaaattggg ttgtatccac
      361 gctgtccatg acttttaggc agacgacaca ttttgctgta tcgccttcga ttttaggaac
      421 gagcgaaggt gtcgccgaat aaagggctcc gcaatgcggg cagaagaaag cgcggccttc
      481 taagaccggt cctacgtgag gcatgttggc ctccctgctc ccagccccga tttcgcacat
      541 cctaagaata tggatacgat tgccaacaac aagggtcgct ctggctcgac ggaccaagcg
      601 gcgggaaacg gcgagcagtt acggcttagc ttcagtttgg tcctacaatt cagggaacaa
      661 cgtcacgatg ggaccgccgc tgaacaaagc cgcagaaggt gggacagaag cgcccaccgg
      721 agacgggaac ggcaaacgag gatttgctct ttcgagagcc cgatcatctt ggggccagaa
      781 tagacggacg cgcacgatat ccccaagggc cgccaggcgc gatgatctga caatgctaag
      841 gtgagcgcaa ggcggcctga ccagggcggc gggaagcggc gggcggacat tgcgcggctg
      901 actaggtgca ggcaacttcc ttttccgcag ccaccacaaa atcatcgagc agcagttgct
      961 gccgcctagt ggaccatccc gtcgggtaag tggcgtgtcg ccatacaaac cgcaccacga
     1021 gcgggttgag ctcgagggtc tcagtcccga tctcctcctg cgcggccata gccgtaattg
     1081 cctcgttggg ctgatgatga agctgcgcgc ctatggtttg atcggcagtc ggtgttcccg
     1141 cgccaccggg cggcgacgcc gctgctgatt gattgatctg ttgctcagtc gcggcaacga
     1201 cgataccgcg agcgcccccg ataccccccc gcaaggcaca ccaggggcac atgccgccaa
     1261 ctgacgcgag ctaaatcaac gccctaggcc aacttgcggt caccctcata acctgatggt
     1321 cgtatgttca atcttgagcc acgcgcctgt ggctcagaaa tttctaatca aaggccgaaa
     1381 acgagttttg taatactttc tcaccgaaag cagacctccg ccagcgcggt tggcatgtcc
     1441 gctgagtgcc ataagcagac atcggctatc ttcggtccaa cgcgcaccgc tcattcaaac
     1501 gacagcccgt ttaggcgcag tccccgtacc catacccaaa ggccgaaacc gggtggattc
     1561 tccacaaagt gatattacgt accgccatgt tcgatcttgg aatgagaggc cctcactgga
     1621 ctcatggccg aagaacgcat caaccggaaa ctggctgcca tcctcgcggc agacgtcgtc
     1681 ggctattccc ggctgatggc atccgacgag gcgggcacgc ttgccgcttt gaagcggcac
     1741 cggcaaatgg tctttgagcc ggccgtcgct gctcatcagg gccgcatcgt gaagctgatt
     1801 ggcgatggca cgatcgtcga gttcgcgagc gtggtcgatg ccgtaaactg cgcgctttca
     1861 gtgcagcggt ctggagtctc actgcaggat gagagtttac acaggccaag gattgttctc
     1921 cgaattggca tcaatctagg cgacgtgatt atcgaaggcg atgatattta cggcgacggt
     1981 gtaaatattg ccgcgcgcct tgaaccggtc gcagaacctg gcggcatttg tatttcctcg
     2041 atcgtcaacg agagcatcgg caatcggatc gatgctcgct tcgaggacgg tggccacatc
     2101 aatgtcaaga atatcgaccg gccgattcgg atctggcggt ggcatcccga cgcgcacgcg
     2161 cccgtcaccg atggcccgcg ccccaacgcc ggcattcctc aaccgcatac ggcaattgct
     2221 gttttgccct tcaccaacat gtctggggat ccagagcaag agtatttctc cgacgggatc
     2281 agtgaggaca tcatcaccga cttgtcgaag atcgcgggcc tgatggtcat cgcgcgcaac
     2341 tcgagcttca cctacaaggg gcgttcggtc gatgttcgca ccattggccg cgaacttggc
     2401 gtgcagtcgg tacttgaagg ctcgatccgc cgttccggca atcgtgtgcg gatcaccgca
     2461 cagctcatcg acgcaaccag cggcgggcat ctatggggtg atcgctacga tcgcgatttg
     2521 acagatatct tcgaagttca ggacgacgtg acgcgccgca tcgtcgacgc gctgaaagtg
     2581 acactcagtc cggcggaaac ggaacgcctt gccaaggcca aaacatctaa cctcgccgcg
     2641 tatgattacc tccttcgcgg tcgggagtta atgctcggta aggaaaagaa tcgccagacc
     2701 ttcgaacaat cgatagcgtg cttcaagaag gcattggaac acgatcccga ctattcgcaa
     2761 gcttatgcct gcctcggctt cgcgcacatc ttcgactacc agaaccgttg gaccgacgac
     2821 cctgacagct cactgctact ggtcaaacag tacgcgcgtc aggccatcga gaaagatccg
     2881 aacgaaccgc tcgcgcgatg tgtctcggca atggccgcgt cgtttgaaaa ggacctcgac
     2941 cgggcgaggt ctgaaatcga tgttgcattg tcactgaacc ccaattttgc tttggcccac
     3001 aatcttcgtg gtagcaatcg gatctattca ggaaagccgc tggaagcgat tccagaaatt
     3061 gagcacggca tgcgtcttga cccagcgtta agttcgcaat tcctccactt tctcggtatg
     3121 gcatatctgc ttgcacgcaa gtacgaaata gcggctgctg tgcttaaaca gcggattgtg
     3181 ctcgtgcccc ggacggattt ttcccgcgct cttctcgctt ctgctcttgg tcatctcggc
     3241 gagttagagg aggcatgtcg ggtttggggg gagcttaaag agatcaaccc caactacgcc
     3301 ttcgccgacc acgttggccg gctgcccttt agacgcaagg aagacgtcga gcgcatagca
     3361 gacggtctca ggaaggcagg actattgaac tagcagtgga gcatgatgtt gcgagataac
     3421 aagcagatcg cgcgcaggtc ggtctgacgc tagtctggat cgagattaaa gatgttgtac
     3481 tggagtgatg gggcggcggt gccgcaaaat gaactatcat gacctttcga ctgaaaacgt
     3541 tgcggcgatc ctctcagctg ccgaagcaag caattcttaa aaacaccagt cggcaaattt
     3601 ttgaaaaaag cccggaggca aaagaaaata cagccagccg aagccggctg aattcgatcg
     3661 actttttgcg cggcctggtc atggttgtga tggcgcttga tcacacgcgg gatttttttg
     3721 ctgctggcgg cttgaatccg cgcgacgtca ccgagccggc gctattccta acgcgctgga
     3781 ttacgcattt ctgcgccccg acgttcgtct ttctcgccgg catctctgcc tttttgtacg
     3841 gcacggagcg caagaccaat gaggttagcc ggtacctgtt tacgcgcggt tgctggttgg
     3901 ttctcatcga gttcagcgtc gttcgctttg gttggacctt cagttttaaa atcggttacc
     3961 ttgtcattca ggtgatcttc gtaattggtg cgtcgatgat tgtgctcgcg gcgcattctg
     4021 acgaaccgaa acacgcattg agcctggtcc aatacctgcg aactattggc tacaaggctt
     4081 gggttgagga catcaacggc aatgagatcg aggaaacggc cctaaagatg gcgatcaagt
     4141 cgttttgcga ttgaagatcc gacgtaatag attcgcactt tcgtcattat cacgacggat
     4201 gcaaacgagc tcagatccac aatcagatgc cgctgatctt agcgcctggc gactacattc
     4261 gccggctgag cgatgagccc gatcggcgcg atttgctacg gccgttcccg gcccagccga
     4321 tgcggatgtg gacgatttcg accagccgaa cgtgctgatc tgcagt
//
LOCUS       DATILV010000703         2543 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2727307, whole genome shotgun sequence.
ACCESSION   DATILV010000703 DATILV010000000
VERSION     DATILV010000703.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2543
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2727307"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..788
                     /locus_tag="VLJ17_16700"
     CDS             <1..788
                     /locus_tag="VLJ17_16700"
                     /inference="COORDINATES: protein motif:HMM:NF014899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="extradiol ring-cleavage dioxygenase"
                     /protein_id="HSV24654.1"
                     /translation="IARAAVRRLRDAVKAAALDALIVFGDDQNESYLEDCRPMFAIYC
                     GETIRNSNTQHRTYSHLPAWYIENRAGFFEPDDPRDYPVHVALAVHLIETLSEDEFDL
                     ASSKSLRASEGEGHAMAYVHRHVMDAGAPIPIVPVFLNTYFPPNQPSPRRCYKLGQAV
                     HRAVSGFPGNARVGVLASGGLSHFLVDEELDRAILKALADKDRAFLQTLPRNKLHAGS
                     SEILNWVALAGAVEDIDLDWFEYVPGYRTPAGTGTGMSFATWR"
     gene            994..2175
                     /locus_tag="VLJ17_16705"
     CDS             994..2175
                     /locus_tag="VLJ17_16705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24655.1"
                     /translation="MPSRQPEEAKGFKLLGHDRSAGWGGGSIVEVHNGYAYVGAVGGA
                     SYNGPEGYTAHDVRDPRNPKKVYEFRAPPGVHCHKVRVVGDHHLYVNSERLVGDKGKN
                     ARAGLFIFDISKPDQPREVGFYDTPGSGPHRFGVDNTRGLAFLPNDAPGWNKRVIWTL
                     DIRDPLRPEVVSVWGLPWQKTEGVGDGNDPMPAESAITLHGPPMIRGNRMYCAWWGGG
                     ISIIDCADLRNMQLIGHVQWSPPFPGSTHTCWPIGDKPYLVVTDEARAKQKYWDSQFM
                     WIVDARHETNPIPVATFFPDREKYFNRPGRFGAHNILENITTEGPWANIVFLTYFNAG
                     LRAVDVSDVLRPKEIGCYVPELPDGQDSIQSNDIGADEHGRIYLIDRAGAGMHILEYT
                     G"
     gene            2331..>2543
                     /locus_tag="VLJ17_16710"
     CDS             2331..>2543
                     /locus_tag="VLJ17_16710"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSV24656.1"
                     /translation="MDLGLSGRVAIVTGASRGIGKACAAELAAEGAHVVAVSQDPARN
                     AAACAALAAQAKGRVVAAPADLNDPAA"
BASE COUNT          486 a          832 c          767 g          458 t
ORIGIN      
        1 atattgctcg cgcggctgtg cggcgtctgc gcgacgcggt taaagcggcg gccctcgacg
       61 ccctgatcgt gttcggcgat gatcagaacg aaagttactt ggaagactgc cggcctatgt
      121 ttgcgattta ctgtggcgaa accatccgca acagcaacac ccagcaccgc acctattcgc
      181 acctgcccgc ttggtacatc gagaaccgcg ccggcttctt tgaaccggac gacccgcgcg
      241 actatccggt ccacgtggca ctcgccgtac acctgatcga aaccctatcg gaggacgagt
      301 tcgatcttgc cagttcgaaa tcgctgcgcg ccagcgaggg cgaaggtcat gccatggcct
      361 atgtgcatcg ccatgtgatg gacgccgggg ccccgatccc gatcgtgccg gtattcctca
      421 acacttattt cccacccaac cagccgagcc cgcggcgctg ctacaagctt ggccaagcgg
      481 tgcatcgagc ggtcagcggg tttcccggca atgcgcgggt cggtgtcctc gcctccggtg
      541 gcttgagcca cttcctggtc gacgaagaac tcgaccgcgc catcctcaag gcattggccg
      601 acaaggaccg cgccttcctg cagacgctgc cccgcaacaa actgcatgcc ggctcatcgg
      661 aaatcctcaa ctgggtcgcg cttgcgggcg ccgtcgagga catcgacctc gactggttcg
      721 aatatgttcc gggctaccgc acgccggccg ggaccgggac cggaatgagt tttgcgacgt
      781 ggaggtaaat gtctttatat ggcactatcg tagcgcaaga cgttgttgtt cactcaagct
      841 cagagctacc cgcccggaat gccgatgcct tgtggctccg ccagcaacgc acgtgcgatc
      901 ggcaagtatg cgccgttcac agaccttcgt cagttgatcg gcgatcgcgc aaaatcaatc
      961 taatcgatcc gacacctgtg ggaggtcgcc aaaatgccgt cacgccaacc cgaggaagcc
     1021 aaaggtttca aactgctcgg gcatgatcgc agcgccggct ggggcggcgg cagcatcgtc
     1081 gaggttcaca acggctacgc gtatgtgggc gccgtcggcg gcgcgagtta caacgggccg
     1141 gaaggctata cggcgcatga cgtgcgcgac ccgcgcaatc ccaaaaaggt ctacgagttc
     1201 cgcgccccac ccggcgtcca ttgccacaag gtgcgcgtcg tcggcgatca tcatctctac
     1261 gtgaactcag agcggctggt cggtgacaag ggcaagaatg cccgcgctgg gctcttcatc
     1321 ttcgatatca gcaagcccga tcagccgcgc gaagtcggct tctacgacac gcccggcagc
     1381 ggcccgcatc gcttcggcgt cgacaacacg cgtggcctcg ctttccttcc caacgacgcg
     1441 ccgggttgga acaagcgggt gatctggacc ctcgatatcc gcgatcccct caggcccgaa
     1501 gtcgtcagcg tttggggcct gccgtggcag aagaccgagg gcgtgggcga cggcaacgat
     1561 ccgatgccag ccgaaagtgc catcacgctg cacggcccac ccatgatccg cggcaaccgc
     1621 atgtattgtg cctggtgggg cggtggcatc tcgatcatcg actgcgccga cctgcgcaac
     1681 atgcagctta tcggtcatgt gcaatggtcg ccgccgttcc cgggctccac ccacacctgc
     1741 tggccgatcg gcgacaaacc atatctcgtg gtcaccgacg aggcccgcgc caagcagaaa
     1801 tactgggaca gccaatttat gtggattgtc gatgcacgtc acgagaccaa cccgatccca
     1861 gtcgcgacgt tcttcccgga tcgggagaaa tacttcaatc ggcctggtcg ctttggggct
     1921 cacaacattt tggagaacat caccacggag gggccgtggg ccaacatcgt gttcctcact
     1981 tattttaacg ccggcctgcg cgccgtcgat gtgagcgatg tgctgcggcc gaaggaaatc
     2041 ggctgctatg tgccggaact ccccgacggg caggactcca tccagtccaa cgacatcggc
     2101 gccgacgagc acggtcgcat ctacctgatc gaccgcgccg gcgcgggtat gcatattctg
     2161 gaatatactg gatgataaaa tcaattgaac atcggtcgtc cccgcgacag cggggaccca
     2221 gtgcaccgcg gcgctaccgg ggttggatcg cccggtcaag cggggcgatg acactggaga
     2281 ggcggcgacg cgaacgttcg gctccagttt accggaattc gccctgagcc atggacctcg
     2341 gtctttcagg tcgcgtcgcg atcgtcaccg gcgccagccg cggcatcggc aaggcctgcg
     2401 ctgccgaact cgcggccgag ggcgcccatg tggtcgcggt cagccaggat ccggcgcgca
     2461 acgccgccgc ctgtgccgct ctcgccgcgc aagccaaggg ccgcgtcgtc gcggcgccgg
     2521 ctgatctcaa cgatcctgct gcg
//
LOCUS       DATILV010000704         3269 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2212821, whole genome shotgun sequence.
ACCESSION   DATILV010000704 DATILV010000000
VERSION     DATILV010000704.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3269)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3269
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2212821"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..315
                     /locus_tag="VLJ17_16715"
     CDS             <1..315
                     /locus_tag="VLJ17_16715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24657.1"
                     /translation="ESSLGAWFVIGRAYPVWATLSTSGLIGIELPLAVKETITFPDGD
                     IPYKRQGGIYVPTKVPPGRAAARALHDRLAHEGVKNTVAAEPPPPLDYANLWNAMRAE
                     VA"
     gene            657..1658
                     /locus_tag="VLJ17_16720"
     CDS             657..1658
                     /locus_tag="VLJ17_16720"
                     /inference="COORDINATES: protein motif:HMM:NF015736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DnaB-like helicase C-terminal domain-containing
                     protein"
                     /protein_id="HSV24658.1"
                     /translation="MAKEVRGGKRSPEEISAEAALTLQEIMTCASPIRPKKIGDIAGE
                     VLRHASAAKSGEALHGLNTGIAALDAILGLMLGGDLGAIIASQGDGKTVLATQIGAHA
                     AEAGRPVLFEQLEMSDEQMGARELAAASGIPVNHIHEGAFDAFQWEQIVEAERHLRTL
                     PFHIIDTEETTVRQIESQALTMQRMGGLSLVIIDQLDKIKAVGKYRDRFERMAEITRD
                     LKKMAKRLKVPVLVLAQRTRGAQRRDDATPHVLDADAPSLERDCDWILGLWQVSNWMR
                     QNKPDSRKVSDYEDWNTKIRQLEGKAEIIILKRRRGRAFQQCELRFEGARMRFAEAT"
     gene            1655..1861
                     /locus_tag="VLJ17_16725"
     CDS             1655..1861
                     /locus_tag="VLJ17_16725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24659.1"
                     /translation="MTEEREYELEVWQSGLMVASVHGPDFDFVHGEAMHYALQYAQDG
                     PVEIRGIPADKFEQVKAEATGRTP"
     gene            1897..2151
                     /locus_tag="VLJ17_16730"
     CDS             1897..2151
                     /locus_tag="VLJ17_16730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24660.1"
                     /translation="MTGVKLTSFGSSIVRRGGHDHQSDDDMLLLEIIKRAPGMAKDDL
                     QRCFVAILEEYGADALAAVQSGHVQFEEVRAGARPEGEAQ"
     gene            2160..2393
                     /locus_tag="VLJ17_16735"
     CDS             2160..2393
                     /locus_tag="VLJ17_16735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24661.1"
                     /translation="MLEIRHRLRLDGDAYVVIENFGSQPEISWRVPDRTTADALITER
                     KSLLKAMVASISDDARKAVGEALEIDNLQAGHA"
     gene            2393..3064
                     /locus_tag="VLJ17_16740"
     CDS             2393..3064
                     /locus_tag="VLJ17_16740"
                     /inference="COORDINATES: protein motif:HMM:NF015550.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase small subunit"
                     /protein_id="HSV24662.1"
                     /translation="MALGLVKRPTNPHSAPPVRQFIQATQEPAAPKNAPAHKFTARQA
                     LFMDHWMVSRNATQAAIAAGYSGKTAYSSGQRLLKQVEIKGELDRRAGKQADKLEVSA
                     DRVVREVAKIAFSDMGRFLGADGLPLTDFSKLDPDDTAAIHSITVEEFKDGRSDKREV
                     RRFKFSLHDKVKGLDLLMQKLGLKVEKHEHKHDVTIIGMLLSEIDQESRGKVIEHEKL
                     DTPAR"
BASE COUNT          767 a          886 c         1001 g          615 t
ORIGIN      
        1 gaaagctcgc tcggggcatg gtttgtgatc gggcgcgcgt atccggtatg ggcgaccctg
       61 agtacgagcg gcttaatcgg aatcgaactc ccgttggccg ttaaggaaac gatcacattt
      121 ccagacggcg acattcccta caaacgccaa ggcggaatct atgtgccgac caaagtaccg
      181 cccggccgcg ccgcagctcg tgcattgcac gataggctgg cgcatgaagg cgtgaagaac
      241 accgtggctg cggaaccacc accgccgctc gactatgcga atctctggaa cgcaatgcgt
      301 gcggaggtcg catgacgcgc gatgtcgcag ccatagaggc caatttcctc gggtgcctac
      361 tccgctcccc ggatgaattc tgggcgatca ccgacatcgt ggcgcctgag atgttctcca
      421 ttccgattca ccagcggatt tatgacggca tccggtttct atgcgaggcg ggaagggggg
      481 tgacgttcgc gacgttgcgc gcgcatcttc cggcagagga tgatgccggc gttccctacg
      541 tgtcgcatct ggcggtgctg aaagagaacg cgatcgaggc tggcgctgcc cgtgattacg
      601 caagcgcaat atccgaacgc tctgccggaa gccgcattgc cacgctcggc gaatggatgg
      661 ccaaggaagt ccgtggcggc aagcgttcac ccgaggaaat atccgcagaa gccgcattga
      721 ccttgcaaga aatcatgaca tgcgcgtccc cgatcagacc aaagaagatc ggagatatcg
      781 ctggcgaagt gctcaggcac gccagcgcag ccaagagtgg agaagcgttg cacggcctaa
      841 acaccggcat cgccgcactt gatgcgatct tgggcctcat gctcggcggc gatcttggag
      901 caatcatcgc cagccaaggc gatgggaaaa ccgttcttgc aacccaaata ggcgcgcacg
      961 ctgcggaagc tgggcgcccc gttctttttg aacagcttga gatgagcgat gagcaaatgg
     1021 gcgcgcgtga attggctgcg gcctccggga ttccggtcaa tcatatccac gaaggcgcat
     1081 ttgatgcgtt tcagtgggag caaattgtcg aggcggagcg gcacctgaga acgctgccgt
     1141 ttcatatcat tgataccgaa gagaccacag ttcggcagat cgagagtcaa gcgcttacga
     1201 tgcagcgcat gggcggactg tcgctcgtca tcatcgatca gctcgacaag attaaagctg
     1261 tcggcaaata tcgtgaccgc ttcgaacgta tggcggagat aacgcgcgac ttaaagaaaa
     1321 tggcgaaacg cctcaaggtg cccgtgctcg ttctcgcgca acgcacgcgc ggcgcgcagc
     1381 gccgagacga cgctacgccg catgtgttgg atgccgatgc accgagcctt gaaagagatt
     1441 gcgattggat tctcggcttg tggcaagtgt ccaattggat gcgccaaaac aaaccggaca
     1501 gccgcaaggt gtcggattat gaggactgga acactaaaat ccgccagctt gaagggaaag
     1561 ccgaaatcat catcttaaag cggcgacgtg gtcgggcatt ccagcaatgc gagttacggt
     1621 ttgagggcgc tcggatgaga tttgcggagg ccacatgacc gaagagcgcg aatacgaact
     1681 tgaagtctgg caatccggcc tgatggttgc ctccgtgcat ggccctgatt tcgatttcgt
     1741 gcacggtgag gcgatgcact acgcattaca atacgcgcaa gatgggccgg tcgaaatccg
     1801 cggcatcccg gcggataaat tcgagcaagt gaaggctgag gcgaccgggc gcacaccatg
     1861 atatcgggag tggtggcaat ggcgggacgg cagtaaatga ccggcgttaa gctcacttcg
     1921 ttcggctcct cgatcgtgcg ccgcggcggg catgaccatc agtccgatga tgatatgctg
     1981 ttactggaaa tcatcaaacg ggcgccgggg atggccaaag acgatctaca gcgctgtttt
     2041 gttgcgattc tggaagagta tggcgccgac gcgctggccg cagtacaatc cggccacgtt
     2101 caatttgagg aagtcagggc cggggcgcgg ccggagggag aggcacagtg agaactgtga
     2161 tgcttgaaat tcgtcacagg ctgcgcctgg atggcgatgc ctatgttgtc attgagaatt
     2221 tcgggagcca gccagagatt agttggcgtg taccggatcg tacgaccgct gatgccttga
     2281 tcactgagcg caaatcattg ctcaaggcaa tggtcgccag catatcggac gacgcgcgga
     2341 aggcggttgg ggaagcactc gaaatcgaca acctgcaagc ggggcatgcc taatggcgct
     2401 cggcctcgtg aaacgcccca caaacccaca cagcgccccg cctgtgcgtc aattcattca
     2461 ggctacccaa gagcctgccg cccctaaaaa cgcaccagcg cacaaattca ccgcccgcca
     2521 ggccctattc atggaccact ggatggtgag ccggaatgcg acacaggcgg caatagcggc
     2581 cgggtattcg gggaagacgg cctattccag cggccaacgg ctgttgaaac aagttgaaat
     2641 caaaggcgaa ttagaccgtc gcgccggcaa acaggccgat aaactagagg tttcggctga
     2701 ccgtgtggtg cgcgaggtcg ccaagatagc attcagcgac atggggcggt ttctcggggc
     2761 tgatgggcta ccgctaacgg atttcagcaa gcttgaccct gatgatacgg cggctatcca
     2821 cagcatcacg gtcgaggaat tcaaggatgg ccggtcggac aagcgtgagg tccgccggtt
     2881 caaattctcc ttacatgaca aggtgaaggg gttggacttg ctgatgcaga agctcgggct
     2941 gaaggtcgag aaacacgagc ataagcacga cgtgaccatt atcggcatgc tgctatccga
     3001 gattgaccag gaatcgcgcg gcaaggtgat cgagcacgag aagctagaca ccccggcccg
     3061 ctaggcatag ggttctggcg tctctcatcc tcccgagaga cttccccggg actggcccag
     3121 cccgcaacgg ctgggccttt ttcttggcaa tacatacgat acaattatct gttagcaaca
     3181 ctgttgacgg aagcattagc agttgctaac gtggtttcat cagcaagggg aacacggcga
     3241 tgaagctcat ccacaaaaac ggcaaagtc
//
LOCUS       DATILV010000705         8092 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4257525, whole genome shotgun sequence.
ACCESSION   DATILV010000705 DATILV010000000
VERSION     DATILV010000705.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8092
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4257525"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            230..1012
                     /gene="hisN"
                     /locus_tag="VLJ17_16745"
     CDS             230..1012
                     /gene="hisN"
                     /locus_tag="VLJ17_16745"
                     /EC_number="3.1.3.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007615123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004401 - histidinol-phosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphatase"
                     /protein_id="HSV24663.1"
                     /translation="MTAVDFGAFIDELATVSGDAIKPFFRTSLGVEDKSCGGAFDPVT
                     AADRVAEHAMRTLIREKFPAHGIIGEEFGPERSDAEFVWVLDPIDGTKSFISGMPAWG
                     TLIALTRSGRPVFGMVHQPFIGERFSGDGLAAVYRGPAGNRALRVRPCPVLAEAVLYT
                     TSPRLMTADDRAIFARVEEAVRLSRYGGDCYSYCMLAAGHVDLVIETELKPHDIAALI
                     PIISGAGGIVTTWNGKVPESGGRIIAAGDRRIHAAALALLNP"
     gene            complement(1053..2000)
                     /locus_tag="VLJ17_16750"
     CDS             complement(1053..2000)
                     /locus_tag="VLJ17_16750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV24664.1"
                     /translation="MKLVSIPANPVPEGAVVGVLKTPDELSIRFTRWPPPPSGRKGTV
                     CIFQGRTEFIEKYFEVVRDLNARGFAVATLDWRGQGLSDRLLGQARKGHISNFAKYGI
                     DLETFMREVVLPDCPPPLFGLANSMGAAVLMRAAAQGHRWFERLVLCAPMIKLTNIPL
                     LPAVRALVRTMRLAGLGRIFVPGGGVACKASGPFLDNPVTSDPIRYARTAAIIEAEPA
                     LALGAPTIAWLDSAFRVMAEFANPAFPARLRQPMLIVACGRDQLVSTAATEEFGSRLR
                     AGSHLVVPGSKHEILMEHDLFRSQFWAAFDAFVPGTSAF"
     gene            2271..2735
                     /locus_tag="VLJ17_16755"
     CDS             2271..2735
                     /locus_tag="VLJ17_16755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008139030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20 family protein"
                     /protein_id="HSV24665.1"
                     /translation="MRTFDLSPLYRSTVGFDRLFSMLDKTTGFEGGSPYPPYNIERTG
                     ENSYRVTIAVAGFSESELSIEAKENTLTVKGQKQAATDAQQAEVLYQGIAARAFERVF
                     RLADFVEVRAASLENGLLHIDLVREIPEAMKPRTIRINAAPNGKVVEAKAAA"
     gene            complement(2798..3214)
                     /locus_tag="VLJ17_16760"
     CDS             complement(2798..3214)
                     /locus_tag="VLJ17_16760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24666.1"
                     /translation="MKVMKRILGPAVVLLAALLPVAALAQSEHAAPYMTWMLSRYERP
                     PVPPADIPNAGPARGSAGPLRNNASAKRSAPLPRARPGDVAAGVAKQIAPRAQAEPQA
                     EPQAEPQALAAGRFDVAPAAVSRPASPAMVPIAPLE"
     gene            complement(3339..4391)
                     /locus_tag="VLJ17_16765"
     CDS             complement(3339..4391)
                     /locus_tag="VLJ17_16765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003519559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-eliminating lyase-related protein"
                     /protein_id="HSV24667.1"
                     /translation="MEFASDNAAGVAPTILDALVRANAGFAIAYGDDTATQRLERRFS
                     ELFERDVAVFLVTTGTAANALALAHLSPPWGAVLCHAEAHAIAHECGAPEFFGGGLRL
                     LGIEGEGGKLQPQAVTAALDRHFGLRPHQLVPGVLSLTQASEFGTIYRTDEVAALAAL
                     AHDRGMMVHMDGARFANALARLGVTPAEASWRAGVDALCFGATKGGALAAEAVVFFDP
                     ARAVAMAERRKRGGHLISKHRFIAAQFEAFLADDQWLTLAAHANRMADRLAAHLANVK
                     LMPIWPVEANIVFVLLPQALHERLQAAGARYYVIHTDRTDPATVPSGFVLVRLVTSFA
                     TTESSVDKFIIHVNPT"
     gene            4810..>8092
                     /gene="gltB"
                     /locus_tag="VLJ17_16770"
     CDS             4810..>8092
                     /gene="gltB"
                     /locus_tag="VLJ17_16770"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HSV24668.1"
                     /translation="MSATNSFPQQGSRARLRQDAANPDAFDRGDQIDVRAVAPSGDRG
                     IAAAQGLYDPALDKDSCGVGFIADIKGRRSHKIVADALTILLNLEHRGAVGADPRAGD
                     GAGILVQIPHKFFVNKTAQLGFSLPAPDEYAVGVLFMPHENAWRRDIHDIFAEEIAQE
                     GMRLIGWRQVPNDNSCLGMSVKPTEPFHEQVFIGKGDRNLDADEFERRLYILRKAISG
                     RLYKMRERRYAGYYPVSISSRTLIYKGMFLADQLGRYYPDLRDPDFESALALVHQRFS
                     TNTFPTWSLAHPYRMVAHNGEINTLRGNLNWMAARQSSARSPFYGEDIHKLWPISYEG
                     QSDTACFDNALEFLVQGGYPLAHAVMMMIPEAWAGNSLMSDERRAFYEYNAALMEPWD
                     GPAAIAFTDGRKIGATLDRNGLRPARYLVTRDDRIVMASEMGVLPIPEEDIITKWRLQ
                     PGKMLLVDLEEGRLIPDEEIKAELAGSHPYEEWLGNTQLVLEELPPSQTRPPLSNLSL
                     LDRQQTFGYTQEDLKMLMSPMGTVGEEAVGSMGNDTPISALSDRPKLLFTYFKQNFAQ
                     VTNPPIDPIREEIVMSLVSIIGPRPNLFDLHGLSTTKRLEVRQPILTNADLEKIRSIS
                     EVGDSHFKSLTLDAVWPADRGAAGLAPALSELCQQAERAVRDGINIIILSDRGAGSDR
                     IPIPSLLTCAAVHHHLIREGLRTSVGLVVESGEPREVHHFCCLAGYGAEAINPYLAFE
                     TLISMKKDLPQKLEDKEIIKRYIKSIDKGLYKVMSKMGISTYQSYCGAQIFDAVGLRS
                     DFVQTFFTGTATRIEGVGLDEIAEEAVRRHRDAFGDSPVYRNALDVGGEYAYRVRGED
                     HVWNATTVAALQHAVRGNSLDKYRAFAKVSNEQSERLLTIRGMFRLKTAEEDGRKPMP
                     LDEVEPAKNIVRRFATGAMSFGSISREAHTTLAIAMNRIGGKSNTGEGGEESDRYKPL
                     PNGDSMRSAIKQVASGRFGVTAEYLVNSDVMQIKMAQGAKPGEGGQLPGHKVDRIIAK
                     VRHSTPGVGLISPPPHHDIYSIEDLAQLIFDLKNVNTAGDVSVKLVSEVGVGTVAAGV
                     SKANAD"
BASE COUNT         1641 a         2513 c         2418 g         1520 t
ORIGIN      
        1 gcgcacagaa tgcaagaggc aaatcagaga ttgttaacgt cttcttaagc gtctttttag
       61 gagttatggc ggcacggatt cgcggcgatt cgcgattacc taatgatttg gcacagtttg
      121 tatccgagcg aagggggcag cccccaaatt cgcgacacgc cgaaccgatt gctcagcacg
      181 ggacggttat gtaggaggtc atcacgacac gcgtggacgg ggcgcataga tgaccgcggt
      241 agacttcgga gccttcatcg acgagcttgc aaccgtatcg ggggacgcga tcaaaccctt
      301 cttccgcacc tctcttggtg tcgaggacaa gagctgtggc ggcgcgttcg atcctgtcac
      361 ggccgccgat cgcgtagccg aacatgcaat gcgcacattg atccgcgaga agttcccagc
      421 tcacgggatt atcggcgagg agttcggccc ggagcgcagc gatgcggaat tcgtgtgggt
      481 gctcgatccg atcgatggca ccaaatcgtt tatctccggt atgccagcat ggggcacctt
      541 gatcgccctc acccgctcgg gacgacctgt attcgggatg gtacatcaac ccttcatcgg
      601 cgaacgcttt tcaggcgacg gcctagccgc cgtttaccga gggccggcag gcaatcgcgc
      661 cctgagggtg cgaccctgcc cagtgctagc tgaagccgta ctgtatacaa cgagcccgcg
      721 gctcatgacc gccgacgacc gcgctatctt cgccagggtt gaagaggcgg tccgcctgtc
      781 gcgctatggc ggcgattgct attcttactg catgcttgcg gccggccatg tggacctcgt
      841 catcgagact gaactcaagc cccacgacat agccgcccta atccccatta tttccggtgc
      901 cggcggcatt gtaacgacat ggaatggaaa agtgcccgaa tcgggcggtc gcatcattgc
      961 ggcgggcgat cgccgcatcc acgcggctgc gctggcgctg ctaaacccct gaggccgagt
     1021 tttcagccca atccgtggcg gcatcgtcgg cgtcagaacg ccgaggttcc aggtacaaag
     1081 gcgtcgaagg ctgcccagaa ttggctacga aacaaatcgt gttccatcag gatttcgtgc
     1141 ttggagccag gtacgacaag atgggagccg gcgcgcaggc ggctgccgaa ttcctcggtc
     1201 gcggccgtcg aaaccagctg gtcacggccg caggcgacaa tcagcatcgg ctgtcgcaat
     1261 cttgccggga aagccggatt ggcaaattcc gccatgacgc ggaaagcgga atcgagccaa
     1321 gcgatcgtcg gcgctccgag cgccaaagcc ggctcagcct cgatgatggc ggcggtacgt
     1381 gcataacgta tcgggtccga tgtcaccgga ttgtcgagga acggaccgga cgccttgcag
     1441 gctactccgc cgccggggac gaatatgcgg ccgagacccg ccaaacgcat tgtccttacg
     1501 agcgccctga ccgcgggcag caacggaatg ttggtcagct tgatcatcgg ggcacacagc
     1561 accaaccgct cgaaccagcg atgcccttgg gcggcagcac gcataaggac cgcagccccc
     1621 atggaatttg cgagtccgaa cagaggtggt ggacagtcgg gcaacacgac ttcgcgcatg
     1681 aaggtctcga gatcaatccc atatttggcg aaattcgaaa tgtgcccttt gcgcgcctgc
     1741 ccaagcaacc gatcggacaa gccttggccg cgccagtcga gcgtggccac cgcaaaaccg
     1801 cgcgcattga gatcccgcac cacctcgaaa tatttttcga tgaactcggt acgtccttga
     1861 aagatgcaca cagtcccctt gcggcccgac ggaggcggcg gccagcgcgt gaacctaatg
     1921 gagagttcgt cgggggtttt cagaacaccc actacggcgc cttcgggcac cggattagcc
     1981 ggaatggaaa cgagtttcat cggcgagtat ttccgcaatt cggcgcgcca agcgattgct
     2041 cacggtgcta acaagagata gatcgcactg catcgcttat cggaatcgcc cccagcactc
     2101 aacgcaagct cggaaaatct tctttaggca tgccccgagc gcatgcgacc gcacccttga
     2161 aggcccggtt cggccccccc atatacggtc cgtgcaggcc aaccggcagc acgaacctgg
     2221 tccggcccaa tcggcggatc tttgcatgtc gcttcaaagg aggatatgcc atgcgtacat
     2281 ttgatctatc cccactttat cgctccaccg tcggctttga tcggctcttc tcgatgctcg
     2341 acaagacgac gggcttcgaa ggtggttcgc cctatccacc ctacaacatc gaacggaccg
     2401 gcgaaaattc gtatcgcgtg acgatcgcgg ttgcgggatt ctccgagtcg gagctgtcca
     2461 tcgaggcgaa ggaaaacacc ctgacagtga agggccaaaa gcaggccgca acagatgccc
     2521 agcaagcgga agttctctat cagggtatcg cggcacgcgc gttcgagcgc gtatttcggc
     2581 tcgccgactt tgtcgaggtg agggctgcga gtttagagaa cgggctcctg cacattgact
     2641 tggtgcgtga gattccggaa gccatgaagc cccgcactat ccgtatcaac gcggcgccga
     2701 acggcaaggt cgttgaggcc aaagcggcag cttaaaccga tccgataatg cttgtagcgg
     2761 cgccccggca actccggggc gtcgttagct ttttgcttca ctctagcggg gctatcggaa
     2821 ccatggcggg tgatgccggg cgcgataccg ccgcaggtgc gacgtcgaac cggcccgccg
     2881 ctaacgcttg gggttccgct tggggttccg cttggggttc cgcttgggcg cggggagcga
     2941 tttgctttgc tacaccggcg gcgacgtcac cggggcgcgc gcgcggcagc ggcgcggaac
     3001 gctttgcgga ggcgttgttc ctcaacggcc ccgcactgcc cctggccggg cctgcgttcg
     3061 gtatgtcggc gggcggcacc ggcggacgct catagcgcga caacatccac gtcatgtagg
     3121 gcgctgcgtg ctccgattgc gcaagcgccg caaccggcag caatgcggcg agaagtacaa
     3181 cagccggtcc cagaattcgc ttcatcactt tcatttgcct cctctgggcc attccggcct
     3241 tctgtctccc actggcgtcg ttttgtcgcg tgactccgat ctgtcgcgtg actccgattt
     3301 tcatcggagc cttcgattcg ggcggacctc gggcatcatt acgtcggatt tacgtggatg
     3361 atgaatttat cgacgctgga ttctgtcgtc gcaaaggaag tcaccaagcg aaccaaaaca
     3421 aaaccggacg gtacagtcgc cggatcggta cggtcggtat ggatcacgta gtaacgggcg
     3481 cccgcagcct gcaggcgctc atgcaaagcc tgaggcagca gtacgaatac gatgttggcc
     3541 tcgaccggcc atatgggcat gagcttgacg ttggcaagat gcgccgcaag acgatccgcc
     3601 atgcgattgg cgtgggcggc aagtgtgagc cactggtcgt ctgccaagaa tgcctcgaat
     3661 tgtgccgcga tgaaacggtg cttggagatg agatggccgc cgcgcttgcg tcgctcggcc
     3721 atcgcgacgg cacgcgccgg atcgaagaac accacagcct cggcggcaag cgctccgcct
     3781 ttggtcgcgc cgaagcacag cgcatcgacg ccggcgcgcc aactcgcctc ggccggcgtt
     3841 acgccgagcc gtgccagcgc attggcgaac cgcgcaccgt ccatatggac catcatgccg
     3901 cgatcatggg ctagcgctgc caaggccgcg acctcatccg tgcgataaat ggtaccaaat
     3961 tcactcgcct gggtgagcga tagcaccccc ggcacaagtt ggtgcgggcg aagcccgaag
     4021 tgccggtcga gcgctgccgt caccgcctgc ggttgcagct tgccgccctc gccctcaata
     4081 ccaagcaatc gcagtccgcc gccgaaaaat tccggcgctc cgcattcgtg cgcgatggcg
     4141 tgagcctcgg catggcacag caccgccccc cagggcggag acaggtgcgc gagcgctaat
     4201 gcgttcgcgg ccgtacctgt ggtcaccaaa aataccgcca catcgcgctc aaacaattcc
     4261 gaaaaccgac gttcgagccg ttgagtggcg gtgtcatccc cataggcaat cgcaaatccc
     4321 gcattggcgc gaaccaaggc gtccagaatg gtgggcgcca cgccagcggc gttatcgctc
     4381 gcaaattcca tgtgtattcc tcacctattg gactcatttg ccgttaacca ataccccgca
     4441 atccccacca caccgaccgc ggaatcaaca aagaaaaagc ccgaagagcc gtaattttgc
     4501 tgtgcaccgc cttgaattcc tgccagaatt ttggcaagtt ccgttaggac agcaatgctg
     4561 tcccactctg gcggacatga tccggcagga ggagtccgcc ggcgagttgg ttgccgctga
     4621 acggggcaca catcaagcga gccgacaagc gggatgcttg gagggaagta ggcttggcgt
     4681 gaaattcggc tggcgagaag gctgcctgct tgacatagtt acgccttcgg gctgcagcgc
     4741 cggctctggg cgacgggggg aaagtgtgcc ggtcggctga tgccaccgga gagtgaggcg
     4801 ggaaaagcaa tgagcgcgac aaactcgttt ccgcagcaag gctcgcgagc gcgattgagg
     4861 caggatgccg ccaatcccga tgctttcgac aggggggacc aaatcgatgt ccgggccgtg
     4921 gccccttccg gcgaccgagg catcgcggcc gcacaaggcc tctatgaccc ggccctcgac
     4981 aaggactcct gtggcgtcgg cttcatcgca gatatcaagg gacgtcgttc tcacaagatc
     5041 gtcgcggatg cgctgaccat cctgttgaac ctcgagcatc gcggtgcggt tggtgccgac
     5101 ccgcgtgccg gcgacggcgc cggcatcttg gttcagattc ctcacaagtt ctttgtcaac
     5161 aagacagccc aacttggctt ctcactgccg gctcccgacg aatatgcggt cggcgtgttg
     5221 ttcatgccgc acgaaaatgc ttggcgtcga gacatccacg atatcttcgc ggaagagatt
     5281 gcacaggaag ggatgcggct catcggctgg cgtcaggtac cgaacgacaa ttcatgcctc
     5341 ggaatgtcgg tgaaaccaac cgaaccgttt catgagcagg ttttcatcgg caagggcgat
     5401 cgcaatctcg atgccgacga gttcgagcgg cggctttata ttctgcgcaa ggccatctcg
     5461 ggccggctct acaagatgcg tgaacggcgc tatgccggct attatccggt ttcgatctcg
     5521 agccgcaccc ttatctacaa agggatgttt ctggcggatc aactcggtcg ttactatccc
     5581 gacctccgcg atccggattt cgagagcgct ctcgccctcg tgcaccagcg tttctctacc
     5641 aacacgtttc cgacctggtc gctcgcccat ccgtaccgga tggtcgccca caacggcgaa
     5701 atcaacacgc tgcgcggcaa cctcaactgg atggcggcgc ggcaatcctc ggctcgatcg
     5761 ccattctatg gtgaggacat tcacaagctg tggccgatct cctatgaggg ccaatccgat
     5821 acggcctgct tcgacaatgc gctcgaattt ctcgtgcagg gcggttaccc gctggcgcac
     5881 gccgttatga tgatgatccc ggaggcatgg gcgggcaatt cccttatgag tgacgagcgg
     5941 cgggccttct atgaatacaa tgccgcgttg atggagccgt gggacggccc ggcagccatc
     6001 gcgttcaccg acggccgcaa gatcggtgct acgctcgacc gcaacggcct gcgccccgcg
     6061 cgctatctgg tcacgcgcga cgatcgtatc gtgatggcat ccgagatggg cgtactgccg
     6121 atcccggaag aagacatcat caccaaatgg cgcctccagc ctggcaagat gctgctggtc
     6181 gatctcgagg agggccgcct cattcctgac gaggaaatca aagcagagct cgccggcagc
     6241 catccgtacg aggaatggct gggcaacacc cagctcgtgc tggaggaact gccaccgtca
     6301 cagacgcggc cgcctctgtc caatctcagt cttctggatc gccaacagac gttcggatac
     6361 acccaggaag acctcaaaat gctgatgtcc ccgatgggga ccgtcggcga agaggcggtc
     6421 ggctccatgg gcaacgacac gccaatctcg gctctgtccg atcggccgaa gctcctgttc
     6481 acctatttca agcagaattt cgctcaagtg acgaatccac cgatcgaccc gattcgcgag
     6541 gagatcgtca tgagcctggt ctcgattatc gggccacggc cgaatctgtt cgatctccac
     6601 ggcctttcga ccaccaagcg cctggaagtg cgtcaaccca tcctcaccaa cgcggacttg
     6661 gaaaaaatcc gctcgatttc cgaggtaggc gattcccatt tcaagtcgtt gaccctcgac
     6721 gccgtttggc cagccgatcg tggcgccgcc ggactggcgc ccgcactctc agaactctgc
     6781 caacaagccg aaagagcggt tcgggacggc atcaacatca tcattctgtc ggaccgcggt
     6841 gccggctccg accgcatccc gattccgtcg ctgctgacct gcgcggccgt tcatcatcac
     6901 ctgatccgcg agggccttcg tacctcggtc ggtctggtcg tcgaatccgg cgaaccacgc
     6961 gaggtgcatc atttctgctg tctcgccggc tacggcgctg aggcgatcaa cccctacctc
     7021 gcgttcgaaa ccctcatctc catgaagaag gatctgccgc agaagctcga agacaaggag
     7081 atcatcaagc gctatatcaa atcgatcgac aaagggctgt acaaggtgat gtccaaaatg
     7141 ggcatctcga cctaccagtc ctattgcggt gcgcagattt ttgatgcggt cggattgcga
     7201 tcggatttcg tccagacgtt cttcaccggc accgctaccc gcattgaggg cgttggcctc
     7261 gacgagatag ccgaagaggc cgtacggcgc catcgtgatg cgttcggtga ttcgccggtc
     7321 tatcgcaacg cgctcgacgt cggcggtgag tatgcctacc gggtgcgggg cgaagaccat
     7381 gtctggaacg ccaccacggt ggcggcgctt cagcacgcag tgcgcggcaa ttcgctcgac
     7441 aagtaccggg ccttcgccaa ggtcagcaac gagcagtccg agcggctgct caccatccgc
     7501 ggcatgttcc gcctcaagac cgccgaggaa gacggccgca aaccgatgcc gctcgacgag
     7561 gtcgaacctg ccaagaatat cgtgcggcgc ttcgctactg gtgcgatgtc tttcggttcg
     7621 atttcgcgcg aggcgcacac cacacttgcg atcgcaatga accgcatcgg cggcaagtcg
     7681 aataccggcg agggtggcga ggaatccgat cgttacaagc cgttgccgaa cggcgattcc
     7741 atgcgctcag caatcaaaca ggtcgcctcg ggccggttcg gcgtcaccgc cgagtatctg
     7801 gtcaattccg acgtgatgca gatcaagatg gcccagggcg ccaagcccgg cgagggcggc
     7861 cagctcccgg gccacaaagt cgatcggatc atcgccaagg tgcgccactc gacgcccggc
     7921 gtcggtctca tttcgccgcc gccgcatcac gacatctact cgatcgaaga cctcgcacag
     7981 ctcatcttcg acctcaagaa cgtcaacacc gcgggcgacg tctcggtcaa gctcgtctcc
     8041 gaggtgggcg tcgggacggt cgcggcgggc gtgtcgaagg cgaacgccga cc
//
LOCUS       DATILV010000706         6609 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4512102, whole genome shotgun sequence.
ACCESSION   DATILV010000706 DATILV010000000
VERSION     DATILV010000706.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6609)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6609)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6609
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4512102"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..283)
                     /locus_tag="VLJ17_16775"
     CDS             complement(<1..283)
                     /locus_tag="VLJ17_16775"
                     /inference="COORDINATES: protein motif:HMM:NF014715.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004340 - glucokinase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005536 - glucose binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0051156 - glucose 6-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HSV24669.1"
                     /translation="MAGDTLSPIDHLPVSRYRSTIEAIDGYLGNRRDRSRIGAAVLGL
                     AGPVENGRCIIVNSQWVTDTDELRATFGFKTINLINDFEAIAYTLPHLNA"
     gene            complement(481..3195)
                     /locus_tag="VLJ17_16780"
     CDS             complement(481..3195)
                     /locus_tag="VLJ17_16780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014332711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HSV24670.1"
                     /translation="MHKVGIEGFPYYLGINSLADMARSEDRVCVLNILGSESRQVTPV
                     SHAFSGGNVVFGTSPGRRGQALETPLGDIPVYNNVREGLDDGHVFDTGVVYLPPSSVR
                     CGVTELIRVNRDLRKIVMITEKVAVHDAREIRALSQSHGVDIIGGNCLGVADSWNRVR
                     IGGALGGDRPEESLLKGSIAIYSNSGSFTTTIAQYLSTEGWGTTTLVSSGKDVYIHYA
                     AREFAHALKNDSRSKAAVLYVEPGGYYEYGIDFGKPVVVCVVGRWKSKLTRAVGHAGA
                     IAGLGDAAEDKEAWFCEALDVEDMFTPEHPVVSAKGAVVTNIADIPTALTMVMKLNGV
                     TPDFDARGSLSLKPWMVNDQRIVLPLELRLPAVRAPAPYDAQIQLIGKRVGAAVPRQV
                     MKDSSGATVMDPHTQVTSVHGHSVLDLARQPLEANFALPLVHEIATHNDCAMLDIAIA
                     AEMNLVGDPAIAAADAAREAGNSPNTVMAAAAAIIGPKRVERALACTKALIDLFAHSG
                     MTDARDESFDVTTLALNRDTRALFLASAEEAVDPRPEAMLKAVRDRGCRSVFLKFLGS
                     LGQRPSRDAILASIATTIAWGPLMRKRISRLTAETLPWYLRLYGVMIGASIPGKHHRA
                     GSLCGISRDERFGQWTMADFLCLALTGKKPTEAEARPLQILIGLLISNGPGAITAQGA
                     KGAVAADGPQTPSRVQINKAMVGFLTHSGFSHGGNGFEGMAFLLERFKDVELTDPTDP
                     AHTVDLKALATRFAQTYKDEKTRSKEAGQAESSALPGIHHPVFKGKPVNYDPRERFIA
                     DFMTEHDDYNIFHAFYRELVQALYDVGASRNVFCVNVDAVIAALLLAVLWKDYRSGAL
                     TVGDLETAAFNIFLYGRMIGAAAEIDDHLNRGRNMDTRTPQERCAFVV"
     gene            complement(3204..4499)
                     /locus_tag="VLJ17_16785"
     CDS             complement(3204..4499)
                     /locus_tag="VLJ17_16785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015929392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP citrate lyase citrate-binding
                     domain-containing protein"
                     /protein_id="HSV24671.1"
                     /translation="MKITGLLHGAPLLRHVDFPVTEVLGPGATVADIKALIERHRQIF
                     IKPLFKGCIGKRGKCGLIGRAADLKTALEEKERLYFAEYRHGNVVAKSNGVTFEGGVP
                     AKYEIYFSITDSTTYRAPTMMLTHMGGVDIEDVDRKHIAEVPFDALTGLTAFVVANAL
                     SDIAAPQEIISPLVQHLPKLWELVHHYAITTLELNPIRMRPSHDGRLTPVACDFKCGF
                     DIDDPRWQRLNLPSHLLASDSSDFEQEVNQLRTHQGQSDVFVINDKGTILAPTFGGGA
                     NALVTEVLGEAAIISSDFGGNPPYGKMKEVARICYKHWLAQSNVLLIIGGKANNTDIY
                     ETFRAMGDALREHFSLFGPSPLYVVVGRGGPNLVRGMGALAETCEALGLPYRFFGFDS
                     AISEVVNYTKKIDAWMKAGGREAIAAHMGLGSIHSQAAE"
     gene            complement(4504..4779)
                     /locus_tag="VLJ17_16790"
     CDS             complement(4504..4779)
                     /locus_tag="VLJ17_16790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24672.1"
                     /translation="MAGFVVTSLTLPCYRPRLSRASHIPVRSVVLRVVLGGIGLLIGP
                     IAPSPLMKAPAMQDERHFGMGIGALAMLPVTSRTSEALIIALTPHRG"
     gene            5529..5999
                     /locus_tag="VLJ17_16795"
     CDS             5529..5999
                     /locus_tag="VLJ17_16795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24673.1"
                     /translation="MTIAMGASRHGSLRGRGYSRHPLVDLEDRVLNKLGDVADAFARH
                     KANDQDPRHDEGTLLGRSLGNVLAAQIYDREDPASFVAFRLYVGLGDGIFFVSAEQGD
                     IAFRLFAAAADHLGSGFNFLRERRLKWQNYGHQRTVPQSPVDQEALEHVRFSSA"
     gene            complement(6240..>6609)
                     /locus_tag="VLJ17_16800"
     CDS             complement(6240..>6609)
                     /locus_tag="VLJ17_16800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014890533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF447 domain-containing protein"
                     /protein_id="HSV24674.1"
                     /translation="GCLTGRHLWPTVASDHVPVQRLAGALAHAELAVDRITEDNERPR
                     FHCRVLSVATHAAFQGFNRAQAAVIEAAILVSRLEMLPREKIEREVAYLQLAVGKTAG
                     AAEQQAWQWLMERIAARYAD"
BASE COUNT         1376 a         1958 c         1973 g         1302 t
ORIGIN      
        1 gcgcattcaa atggggcaga gtgtaagcga tcgcttcgaa atcattgatt aggttgatcg
       61 ttttaaagcc gaacgtggcg cgcagttcgt cagtatcggt cacccattga ctgttgacaa
      121 tgatgcatcg tccgttctct accggacctg cgaggccaag aaccgcagcg ccgatgcggc
      181 tgcgatcacg gcggttgccg aggtagccgt caattgcttc gatcgtggat cgatatctgg
      241 acaccggcag gtgatcgatc ggggagaggg tatcgcccgc caaaacggca aagcgtgcgg
      301 acgttccccc gatgtcgcct agtaaggctt gatcgcacgc cacgtccaaa ccaagccttc
      361 cgcttgagcg catgccggct cagaggcctt gatgagccgg cataccaatg ccgcgacagt
      421 aattctatgc cccatttgag taaagcgcac cccgcggatc gagcggccgc aacttttcgc
      481 tcagacgacg aacgcacacc gttcttgcgg tgtacgtgta tccatgtttc ggccgcgatt
      541 gagatgatcg tcgatctcgg cggcggcacc gatcatgcgg ccgtagagaa atatgttgaa
      601 ggccgccgtc tcaaggtcgc ctaccgtaag agcgccggag cggtagtcct tccagaggac
      661 cgccagcagc agggcggcga tcaccgcatc gacattaacg cagaagacgt tgcgcgatgc
      721 acctacatcg tagagcgcct gaaccaactc gcggtagaat gcatgaaaaa tgttataatc
      781 gtcgtgctcc gtcatgaagt cggcaatgaa gcgctcacgc ggatcgtagt tgacgggttt
      841 gcccttgaac accgggtgat gaattcccgg aagcgccgac gattcagctt gccctgcctc
      901 cttcgaccga gtcttttcgt ccttgtaggt ttgggcaaac cttgtggcca aggctttgag
      961 atcgacggta tgggcgggat cggtcgggtc cgtgagttcc acgtctttga accgctcgag
     1021 aaggaaggcc atgccttcga atccattgcc gccatggctg aagccgctat gggtcagaaa
     1081 gccgaccatc gccttgttga tctgcacccg cgacggcgtc tgcggaccgt cggcagcgac
     1141 cgcaccttta gcgccttggg cggtgatagc gcccggccca ttcgaaatga gtagcccgat
     1201 aaggatttgc aaaggacggg cttcggcttc ggtcggcttc tttccggtca aggcaaggca
     1261 aaggaaatcc gccatcgtcc attgaccgaa gcgttcatcc cgcgagatgc cgcacaagct
     1321 gccggcccgg tgatgctttc cgggaatcga tgcgccgatc atcacgccat acaggcgcaa
     1381 ataccagggc agagtctcgg ccgtcagacg cgagatgcgt ttgcgcatca gtgggcccca
     1441 ggcgatcgtc gtcgcaatcg atgccaggat cgcgtcgcga gacggccgct gcccgagcga
     1501 acccaggaat ttcagaaata cggacctgca gccgcgatcc cgtacagcct tgagcatggc
     1561 ctcaggccga ggatcgacgg cctcctccgc actcgcaagg aacaaggcgc gcgtatcccg
     1621 gttgagagcg agggtggtta cgtcgaaact ctcgtcgcgc gcatccgtca tgcccgaatg
     1681 cgcgaaaaga tcgatgagcg ccttggtgca agccagcgcc cgctcgaccc gcttcgggcc
     1741 gataatggcc gcggcagccg ccatgacagt gttcggcgaa ttgcccgcct cccgcgctgc
     1801 atcggccgcc gctatggcgg ggtcaccaac caggttcatt tcggccgcaa tggcaatgtc
     1861 gagcatggcg cagtcgttgt gcgtggcgat ctcgtgaacg agcggcagcg cgaaattcgc
     1921 ctccagcggc tgccgggcga ggtcgagaac tgaatgtccg tgaacgctgg tcacctgggt
     1981 gtggggatcc atcaccgtcg cgcccgagct gtccttcatg acctgacggg gcacggcagc
     2041 gccgacccgt tttccgatca actggatttg ggcgtcgtaa ggcgcgggag cgcgcaccgc
     2101 agggagtcgc agttccaaag gcagcactat gcgctgatcg ttgaccatcc acggcttcaa
     2161 cgaaagcgaa ccgcgagcat cgaagtcagg cgtcacacca ttgagtttca tcaccatcgt
     2221 cagcgctgtt ggaatgtcgg cgatgtttgt caccaccgca cctttggcgg acacaaccgg
     2281 gtgctcgggc gtgaacatat cctcgacgtc cagggcctcg cagaaccaag cctctttgtc
     2341 ctcggccgcg tcacccaagc ccgctatagc gccggcatgc ccgaccgcac gtgtgagttt
     2401 tgacttccac cggcccacga cgcacacgac gaccggtttg ccaaagtcga tgccgtactc
     2461 gtaatagccg cccggctcga catagagcac cgccgccttg ctgcgcgaat cgtttttcaa
     2521 cgcatgggcg aactcgcgcg ccgcataatg gatgtagacg tccttgccgg aggagacgag
     2581 cgtcgtcgtg ccccagccct cggtcgaaag atattgcgcg atggtcgtgg tgaagctgcc
     2641 cgaattggag tagatggcga ttgatccctt gagtagcgat tcctcgggac gatcgccacc
     2701 aagagcgcca ccgatgcgca cacgattcca cgaatcggca acgccgagac agttgccacc
     2761 gatgatgtcg accccgtgcg attggcttag tgcgcgtatc tcccgcgcgt catgaacggc
     2821 gaccttctcc gtaatcatga cgatcttcct gaggtcgcgg ttgacacgga tcagttctgt
     2881 cacgccgcag cgcacgctgg agggcggcaa gtagacgacg ccggtgtcaa agacgtggcc
     2941 gtcgtcgagc ccctcacgaa cattgttgta aacgggtatg tcgccgaggg gcgtctccag
     3001 cgcctgcccg cgccgccccg gcgacgtgcc gaaaacgaca ttgcctccgg agaatgcgtg
     3061 gctgaccggc gtcacctgcc gcgattcgct gccgaggata ttgagcacgc agacccggtc
     3121 ctcggagcgt gccatatcgg cgagcgagtt gatgccaaga tagtagggaa atccttcgat
     3181 gccgaccttg tgcatgattc ccctcattcg gccgcttggc tgtggatgct gcccaggccc
     3241 atatgagcgg caatggcctc tcggccgccg gctttcatcc aggcgtcgat cttcttggtg
     3301 taattgacaa cttcggaaat ggcgctatcg aagccgaaga aacgataagg caggcccagt
     3361 gcctcgcagg tctcagcgag tgcgcccatc ccgcgcacga gattgggacc gccgcggccg
     3421 accacgacat agagcggaga cggaccgaat aggctgaagt gctctctcag agcatcgccc
     3481 atggcgcgaa acgtttcata gatatcggtg ttgttggctt tgccgccgat aatgagaagc
     3541 acgttggact gcgccaacca atgcttgtaa cagatgcggg cgacctcctt catcttcccg
     3601 tagggcggat tgccgccaaa gtccgaagag ataatggcag cctcgccgag cacttcggtc
     3661 accaacgcgt tggcgccacc accgaacgtc ggcgccaaaa tcgtaccttt gtcgttgatt
     3721 acgaacacgt cggattgacc ctggtgggtg cgtagctggt tgacctcctg ttcaaagtcg
     3781 gatgagtcgg acgctaacag gtgggatggc agattaagcc gctgccagcg cggatcgtcg
     3841 atatcgaagc cgcacttgaa gtcgcaggct accggcgtaa gccggccgtc gtgactgggc
     3901 cgcatccgga tcggattgag ctcaagcgtg gttatagcgt agtggtggac gagttcccac
     3961 agcttcggca aatgctgcac cagcggcgag atgatttcct gcggcgctgc gatgtcagaa
     4021 agcgcgttgg caacgacgaa ggccgtcaat cccgttaacg catcgaatgg cacctcggcg
     4081 atgtgcttcc tgtcgacgtc ctcgatgtcg acgccgccca tatgggtcag catcatcgtc
     4141 ggggcgcggt aggtcgtaga gtctgtgatc gagaaataga tttcgtactt ggcagggacg
     4201 ccgccttcga aggtaacgcc attggacttg gcgaccacgt tcccgtgccg atactcagca
     4261 aagtaaagtc gttccttctc ctcaagcgcc gtcttcaaat cagccgccct gccgatcagg
     4321 ccgcacttgc ctctcttgcc gatgcagcct ttgaacagtg gtttgatgaa aatctgtcgg
     4381 tgacgttcga tcaaagcctt gatgtcagcc acagttgcgc ctggacccaa tacctccgtc
     4441 acgggaaagt cgacgtgtcg aagcagcgga gcgccgtgga gcagtccggt aattttcatg
     4501 aagttaaccc cgatgaggtg tgagtgcgat gatcagggcc tcgcttgttc ggctcgtcac
     4561 cggcaacatg gcgagagcgc caatgcccat gccgaagtgc cgttcgtcct gcatcgcggg
     4621 tgctttcatt agtggagagg gggcgatcgg accgatgagc aggcctatgc cgccaagcac
     4681 aacacgcagg acgacagatc gtaccgggat atgggatgct cgcgacagac gaggccggta
     4741 gcatggtagc gtcagcgatg tcaccacaaa gccagccatg acctcgtaga cgatgacgca
     4801 acaaaattac gaactgcacc tatcgcttgc cagattggag atggccagtc cagtattcgg
     4861 gcaggctgct caattaatag tcacagtttt ttctgatgtc tactgtggga cgcaaaatac
     4921 ctcccaacgg tggataggcg atcgcatatg ccgcaccagt agcgaaggcc tggagtttat
     4981 cgggagcgga cgcggataca aaaaaccgca ggggcatctg cgggggctgc cggagcaagc
     5041 tccggcaccg caactatatt gccatggaaa taacgcaatg aaaacatcat tggcggggtc
     5101 gacgcgtcgg attgaaatga ccgagatgga gaggaaattt tgcggcgatg tcgtcaattc
     5161 cctgtcccat ccctgctcgc gacgaaaaat caggcattcc ctgcccatac gaggccacat
     5221 gcaattgctc tgctgcggtg gggccgcgcc aaatcgaggc cggcccgccg ccggtcttca
     5281 tccagaatct ggcgtccata tcaagtttca agccgtgccc agcttcgtgg ccccgctatg
     5341 tcggcaaaat tgagcgtgca aagagctctg ccaaattgat gaaatggtgc aacgatcatc
     5401 agaccagcat ttcttagctt aacggaaaac acggccccgt gatcggcgag atagcgttgc
     5461 ttgcaacgat tgcgaccggc gtccgagcag aactgcttgc cgaaatgccg gtagcggacg
     5521 agaccgaaat gaccattgca atgggcgcat cgcgtcatgg ttcgctccgt gggcgtggct
     5581 actcacgcca tccgctcgtc gatcttgaag accgtgtatt gaacaaactg ggggacgttg
     5641 cggacgcctt tgcgcgtcac aaagccaacg atcaagaccc gcgccacgac gaaggtaccc
     5701 tgcttggtcg cagtcttggc aacgtccttg ccgcgcagat atacgaccga gaggacccgg
     5761 caagcttcgt cgctttccgc ctctatgttg gcctgggaga cggtatcttc ttcgtctccg
     5821 cggaacaggg cgatatagcg ttccgcttgt tcgctgctgc tgcagatcac ctcggttccg
     5881 gtttcaactt cctgcgcgag cgccggctga aatggcaaaa ctacggccat cagcgcaccg
     5941 tgccacaaag cccggttgat caagaggcgc ttgaacatgt ccgcttctcc tctgcttgac
     6001 ccggcgggcc ggtcgagcac cctcggacac ggcgccgatg atcgctagtc aatgtgacac
     6061 tggtatcgat acgcagatgc tatctggcat tgtagcgcaa gccgcgaacc acgaaatcag
     6121 gcaggatgcg tacgtaacac cgcttagccg aacgacagtg attcatcaga ttgcccgcgc
     6181 accgtaatca cggacgggcg caagattagg caatggaggt cgcgatttct tggccgacct
     6241 tagtcagcgt atcgtgctgc gatgcgttcc atgagccatt gccaagcttg ctgttccgcg
     6301 gcgcccgcgg tcttgccaac ggcgagttgg agataggcga cctcccgttc gattttctcg
     6361 cgcggcagca tctcaaggcg gctcaccagg atcgctgcct cgatcaccgc cgcctgcgcg
     6421 cgattaaagc cctgaaatgc tgcgtgtgtt gcaacgctca gcacacggca atgaaaacgt
     6481 gggcgctcgt tgtcctcggt gatacgatcg acggcaagct cggcatgggc gagcgcaccg
     6541 gctaggcgct gcaccggtac gtggtcggac gcgaccgtcg gccacaggtg gcggccagtg
     6601 aggcaaccg
//
LOCUS       DATILV010000707         3470 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4771029, whole genome shotgun sequence.
ACCESSION   DATILV010000707 DATILV010000000
VERSION     DATILV010000707.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3470)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3470)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3470
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4771029"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1094
                     /locus_tag="VLJ17_16805"
     CDS             <1..1094
                     /locus_tag="VLJ17_16805"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HSV24675.1"
                     /translation="ALLNQAAGKVTSEDIAMIQFTSGTTATPKGAMLFHVAMLRGAHY
                     GSQVLKLTEADHFFSPQPFFHVGGSIKVMLAPIVSGCTMIVQPYFHAGEALELMERHR
                     CNVLMGHQPHFIEYLNHPDLKKRKLVLEKGMIFASPEVNKRVYDEMGIKKLISPYGLT
                     ETHIGGTACALDDPLELRMTTVGRPMPGVEIGIRQPNGDKFLPVEEPGEVCFRGWCIT
                     KGYFDDPEKTAEALDANGWFRTGDVGVLGSDGYLRLVGRIKDMIRVGGENVAAADVEA
                     ILLKHDAVKQAVAVGMADERLVEVVAVFVELKTGKRATELEIVDYCRQHLASFKVPRR
                     VVFVNDWPMTGAGKIQRYILKESLAVMSE"
     gene            1587..2600
                     /locus_tag="VLJ17_16810"
     CDS             1587..2600
                     /locus_tag="VLJ17_16810"
                     /inference="COORDINATES: protein motif:HMM:NF028479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-alpha-hydroxyglycine alpha-amidating
                     lyase family protein"
                     /protein_id="HSV24676.1"
                     /translation="MRRSNQLKYALGIVVIAATAMSGERAFAQTPDPNSAPNPYRLEE
                     NWAKLPDGRKFGQVIAVETDRDGKSIWAFDRCGGTSCSKSNLAPIMKFDPSGKFVTSF
                     GAGMFNFPHGLAVDREGNIWATDERAKNGKGGVALKFSPDGKVLMTLGKPGTPGDEEG
                     LLDGPSDIVVAANGDIYIADGHGGTTNDRIVKFSKDGKFIKAWAKHGKAQGELDTPHG
                     IALDSAGRVYVADRANSRVQIFDPDGKFIAEWKQFGRPSSVAIDKNGIIYVADTQSNE
                     QNNKGFQQGIRIGSISDGKVTAFIPVPSEAIGTPEGITVDDQGIIYGGYTAKMNLRRF
                     VKK"
     gene            2787..3110
                     /locus_tag="VLJ17_16815"
     CDS             2787..3110
                     /locus_tag="VLJ17_16815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24677.1"
                     /translation="MVRQQGLVVLLFGLLAWLVMPSSTPASAQSPAAYYAGKQVKMII
                     GLGAGGGYDLWARTVARHIGQHLPGNPTVISQNMEGAGSFRAAPDPGIQDPNKAATLT
                     QHSCA"
BASE COUNT          791 a          984 c         1021 g          674 t
ORIGIN      
        1 aagcgttgct caatcaagcc gccggcaaag taacatctga agatatcgcg atgatccaat
       61 tcacctccgg caccaccgcc accccgaagg gcgccatgct ctttcacgtc gctatgttgc
      121 gaggcgctca ttatggcagc caagtcctca aactgaccga ggccgaccac tttttcagcc
      181 cgcaaccgtt tttccacgtt ggcggctcca tcaaagtgat gctcgctccc attgtttccg
      241 gttgcacgat gatcgtgcag ccttactttc atgccggcga ggcgttggag ttaatggagc
      301 ggcatcgttg caacgttctg atggggcatc aacctcactt tattgagtat ctcaatcatc
      361 ccgatcttaa aaaacgcaag ctggtgctgg aaaaaggcat gattttcgcg agccccgagg
      421 tcaataagcg cgtctacgac gagatgggca tcaagaaatt aatcagcccc tacggcttga
      481 ctgaaactca tatcggcggc acggcttgcg cgctggatga tccgttggaa ttgagaatga
      541 ccacagtggg tcgcccgatg cccggagtgg aaatcggcat tcgccagccc aacggcgaca
      601 agttcctgcc tgttgaagaa ccgggcgaag tctgttttcg cggctggtgc atcacgaaag
      661 gatacttcga cgatcccgag aagactgcgg aagcgcttga cgcgaacggt tggttcagga
      721 ccggtgatgt cggcgtcttg ggcagcgatg gttatctcag gcttgtgggc cgcatcaaag
      781 acatgatccg ggtcggcggc gaaaatgttg cggcggcgga cgtcgaagcc attttgttga
      841 aacatgatgc cgtgaaacag gcggtggccg ttggtatggc tgatgaacgt ctggtggaag
      901 tcgtggcggt gtttgtcgag ttgaaaacag gcaagcgggc aaccgaacta gagatcgtgg
      961 actattgccg ccagcatctc gccagcttca aggttccgcg ccgcgtggtt tttgtcaacg
     1021 actggccgat gaccggcgcg ggtaaaattc agcgttacat tctgaaggaa tcgctcgcgg
     1081 tgatgtctga atagcggcgg gtgcagattg tctacgtgcc gggcgtgaac tttacgatct
     1141 gaggagccga aaaccgcctg ccaacgcaag ccgacggccc cgctcgctct gagttcgacc
     1201 gagcggcgcg atctccagcc cctgcgcgca cctgcggtct ccgcgccgcc cccgaccctg
     1261 ccatccaaga ccgcaacaag gccgcaactc ttactcaact cagctgcgat tgacaggctc
     1321 ggcgcgctgg cgatatatct ccgctcataa aaaggtggtt taaaattcct atccataggg
     1381 aaaggtcacg gcgttcattc cggagaccgt cgatgtgcgc cccctggaag gcgtcgcccc
     1441 agacggccag ggcaacgttt atgcggccta caccaacaag cagaatttcc gacggttcgt
     1501 gaagaagtag aaccggagag gtggtcgtgc tcggcgctca tctcgccggg gcagtgtcaa
     1561 cgcgaagtct gcaagggagg agtaccatgc gacgttcaaa tcagttgaaa tacgcgctcg
     1621 gtatcgtcgt tattgcggcg actgcaatgt cgggagagcg ggcctttgct caaacccctg
     1681 atcccaactc ggcgcccaat ccgtaccgcc tggaggagaa ctgggccaag cttcccgatg
     1741 gccggaaatt tggacaagtc atcgcagtag agaccgatcg cgacggcaag agcatctggg
     1801 cgttcgaccg ctgcggcgga accagctgct cgaaatcaaa tctcgccccg atcatgaagt
     1861 tcgatccgtc gggcaagttc gtgacgagct ttggcgcggg gatgttcaac tttccgcatg
     1921 gcctcgctgt cgaccgcgag ggcaacatct gggcgaccga cgaacgggcg aagaacggca
     1981 agggcggtgt cgccctcaaa ttcagcccag acggcaaggt cctgatgacg ctcggcaagc
     2041 cgggaacgcc cggcgacgag gaagggctgc tcgatgggcc gagcgacatc gtggttgcgg
     2101 caaacggcga catctatatc gcggacgggc acggcgggac gaccaacgac cgcatcgtga
     2161 agttctccaa ggatggaaaa ttcatcaagg cctgggccaa gcacggcaag gcgcaaggcg
     2221 agctcgacac gccgcacggg atcgcgctcg attccgccgg gcgcgtctat gtcgccgacc
     2281 gggcgaacag ccgcgtccag atcttcgatc cggacggcaa attcatcgcc gaatggaagc
     2341 agttcggccg cccgagcagc gtggccatcg acaagaacgg catcatctac gtagccgaca
     2401 cccaatcgaa cgagcagaat aacaagggct tccagcaggg aatcaggatc ggcagtatct
     2461 ccgacggcaa ggtcaccgcg ttcattccgg tgccctcgga ggcgatcggt acgccggaag
     2521 gcatcacggt cgacgaccaa ggcatcatct atggcggata caccgctaag atgaatctcc
     2581 gaaggttcgt gaagaagtag cggcagttcc cgattgcgtt gaatctatcc ttcgccattg
     2641 ccgtcctgac accgcaagtt gggtttaccc gacttgcggt gttcaataac taatgcgaaa
     2701 aaccgtgcgg agcccgcgtt ggctataatt caccttcttg tgagaggctc accatccgaa
     2761 ccggttggcg aatgaggatg ggtgacatgg tgcggcaaca agggctcgtc gtgctcttgt
     2821 tcggcttgct ggcatggctg gtgatgccaa gctcgacgcc ggcgtcggcc cagtcgccag
     2881 ccgcctatta cgccggcaag caagtgaaaa tgatcatcgg cctcggcgcg ggcggcggct
     2941 acgacctctg ggcgcgcacg gtagcgcgcc atatcggcca gcatctgccg ggcaatccga
     3001 cggtcatttc ccagaacatg gaaggcgccg gcagcttccg cgccgccccc gaccctggca
     3061 tccaagaccc gaacaaggcc gcaactctta ctcaacacag ctgcgcttga caggctcgcc
     3121 gcgctggcga tatttctccg ctcagaaaaa aggtggttta aaattcctat ccataggccc
     3181 gcacgaggga gtgttcatat gcgtattcga aaccgcacca cgtttggatt tgcattcgga
     3241 gtcgcacttc tattggcgtt tgcagtcgcg ggttccggtc cgtcaaggca accgcgctat
     3301 ccagaagcgg aacaattggc aagaaaacga gaaaaagtca aaagagattt agaggagtga
     3361 aaaaggcaaa acaacctgta acgatgattc gtgtttttcg ataagaaaga ccaggcgaat
     3421 atcggtgaac ctctgcgcta attctcgaat tacgaactag accagctaat
//
LOCUS       DATILV010000708         4302 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2471862, whole genome shotgun sequence.
ACCESSION   DATILV010000708 DATILV010000000
VERSION     DATILV010000708.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4302)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4302)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4302
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2471862"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..717
                     /locus_tag="VLJ17_16820"
     CDS             <1..717
                     /locus_tag="VLJ17_16820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24678.1"
                     /translation="CFPDPEGIALGKGGDGKTYLFSGNGGTDDVAVMDVERALTGAPV
                     VEAAPRIPVQSGPFGINASPNGKYIAVTGRESHLSDFEGNTMSIIDVDIARQGLPGAE
                     VARVQVGTDASSEKVRPFWTAWTPDGQRIAVTNYRVNSLSVVDLKLALAHDSKAEVAR
                     IALSRPDGQPARPKGVAVTPDGRHAIVSGGPNTITASATNPTGMLHIVDLAARAQVAT
                     VTGVGIDPYGLVIVDAMDGD"
     gene            888..1589
                     /locus_tag="VLJ17_16825"
     CDS             888..1589
                     /locus_tag="VLJ17_16825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011090624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSV24679.1"
                     /translation="MANLENKIALIVGAGSGLSASIARSFAGAGMKVALAARSVSDLG
                     PLAAEIGAATFTADATDREAVKKLYADLASNLGHPYAVVYNASYRTRGPFVDLDPADV
                     EKSLAVTAFGGFLVAQEAARRMLPKGEGAILFTGASASVKGYPQSAPFAMGKFALRGL
                     AQSMARELAPQGIHVAHVVVDGGIRSARRPDAADRPDSMLDPDAIAASYLHLLQQPRS
                     AWTWEIEVRPWVEKF"
     gene            complement(1688..2119)
                     /locus_tag="VLJ17_16830"
     CDS             complement(1688..2119)
                     /locus_tag="VLJ17_16830"
                     /inference="COORDINATES: protein motif:HMM:NF013304.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HSV24680.1"
                     /translation="MAQHAIFGPFFATMFLTLAVWVYMYVMRISFINSNNLRPDDLAV
                     PGALARATPPAVSNPSDNLKNLFEMPVLFYALALYLFATNQVDAAYVYAGWIFVGFRA
                     LHSAVHCTFNRVLLRFYLYVISTIALSFMAIRAALTHFGVL"
     gene            complement(2170..2511)
                     /locus_tag="VLJ17_16835"
     CDS             complement(2170..2511)
                     /locus_tag="VLJ17_16835"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSV24681.1"
                     /translation="MMRFNLSADLLAIIMGGALTLALVGATTSAQDFPPERVRAGAAI
                     FSRNCSPCHGTRMQNPESAFDLRQFPPDQHDRFISSVMRGKNQMPPWGDLLDAAEVES
                     LWAYVMAGEPK"
     gene            complement(2617..4290)
                     /locus_tag="VLJ17_16840"
     CDS             complement(2617..4290)
                     /locus_tag="VLJ17_16840"
                     /EC_number="1.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent dehydrogenase, methanol/ethanol
                     family"
                     /protein_id="HSV24682.1"
                     /translation="MKTIGTAAVLSLFLGVAASAQTLDDLKNDGKNTDNILTYGMGYG
                     QNRYSPLKQIDKTNIKRLVPIWNLSLDNQWGEQAQPIIYDGVMYVTNAKATVAIDVGT
                     GRQIWKTPVDWLPETPRVVCCGVSNKGAAIYNGKIYRTTLDAYVVALDAKTGKEIWKS
                     KAAEWREGYSMTVAPLIANGVLITGISGAEFGIRGFIDGWDLETGKQLWRRYTIPGRG
                     EKGNETWPQNTDAYLHGGGSSWITGSYDPDLDLTYWGTGNAAPWASQSRPGDNLYTAS
                     VLALRPKTGEIVWHYQFTPNDAYDYDAVWELILAEIPVNGVKRKVVMQLNRNGFLYVL
                     DRATGAIIAANPYEKVNWASHIDMETGRPVETEIGRKVRAGEQIEMWPSTRGGKNWPH
                     AAFNPDTGLIYANTIHEGRLYKHLTIEEFKAGQRYMFIENLNMPSNGQPIGHVDAIDP
                     LTGKQRWRVPLYDNQYWSAMLATGGGLLFTGKETGEFIALDADNGKTLWQFQTGSGIN
                     AMPVTYTYKGQQYITVLSGVGGLYWNIAKDKLQNVVPGGSVWTFALLPN"
BASE COUNT          788 a         1306 c         1364 g          844 t
ORIGIN      
        1 tgttttcccg atcccgaagg gatcgcactc ggcaagggtg gcgacggcaa gacgtatcta
       61 ttttccggaa atggcgggac ggatgatgtg gccgtgatgg atgtagagcg cgccttgacc
      121 ggcgcccccg tcgtggaagc cgctccgcgc attcccgtgc aaagcggccc gttcgggatc
      181 aatgccagcc cgaacggcaa atacatcgcg gtgacgggcc gggaaagcca cctgagcgat
      241 ttcgaaggca atacgatgtc catcatcgat gtggatatcg cccgccaggg ccttcccggc
      301 gccgaggttg cgcgcgtgca ggtcggcacc gatgcttcga gcgaaaaggt acggccgttc
      361 tggaccgcgt ggacgccgga cggacaacgg atcgcagtca ccaattatcg cgttaatagc
      421 ctctccgtcg tcgatctgaa gcttgcgctt gcccacgaca gcaaggccga agtcgcgcgg
      481 attgcgctgt cgcgcccgga cggtcagccc gcccgcccca agggcgtcgc cgtcacgccc
      541 gatggacgtc acgccatcgt ctcaggcggc ccaaatacga tcacggcgtc tgccaccaat
      601 ccaaccggaa tgctgcatat cgtcgaccta gctgcacgag cccaggttgc gaccgtgacg
      661 ggcgtcggga tcgatcctta cgggttggtt atcgtcgatg cgatggacgg cgactgagcg
      721 tgccgatgag atcgattcac ttctccgccg tcaggcccgc gcagagatac cccgcgtcac
      781 accgcgggga cctcgtcttc gcgggtcttt cgtgtcgagt ctcagcaagc attgatggct
      841 gggacgagcc cgacagtttc taagaattgg ttcagacgga ggccgtcatg gcaaatctgg
      901 aaaacaaaat cgccctgatc gtcggcgccg gatcaggact ctcggcatcg atcgcgcgca
      961 gcttcgccgg cgccggcatg aaggttgcgc tcgcagcgcg cagcgtcagc gacctcggcc
     1021 cgctcgcggc cgaaatcggc gccgcgacgt ttacggctga cgccaccgac cgggaggccg
     1081 tgaaaaagct ttacgccgat cttgccagca acctcggcca cccctatgcg gtcgtctaca
     1141 atgcgagtta tcgcacgcgc ggtccgttcg tcgacctcga tcccgccgac gtcgagaaat
     1201 ccctcgcggt gacggcgttc gggggctttc tcgtggcgca ggaggcggcg cgccgcatgc
     1261 tgcccaaagg tgagggcgca atcctcttca ccggtgcgtc cgcgagcgtg aagggctatc
     1321 cgcaatcggc gcccttcgcc atgggcaagt tcgcgctgcg cggccttgcg caaagcatgg
     1381 cgcgcgagct tgccccccag ggcatccacg tcgcccatgt ggtggtcgac ggtggcatcc
     1441 gctcggcgcg ccgccccgac gccgccgatc gccccgactc tatgctcgat ccggatgcga
     1501 tcgcggcgag ctatctgcac ttgttgcagc agccgcgcag tgcgtggacc tgggaaattg
     1561 aggtgaggcc ttgggtggag aagttttaag gagatgaagc aaaccttttc gtccgcataa
     1621 tccggggtgg cttttgtgct gccggtctcg gattacgggt cccaaaaccg cggtccctcc
     1681 atccaggtta caaaactcca aaatgcgtaa gtgccgcgcg gatcgccatg aacgacaacg
     1741 cgatcgtgga aatgacgtag agataaaacc gcagcaaaac ccgattgaac gtgcaatgga
     1801 cggcgctgtg gagggcgcga aacccgacga agatccatcc ggcataaacg tatgcggcat
     1861 cgacttgatt ggtggcgaaa agatagagtg cgagcgcata aaacagcacc ggcatctcga
     1921 agaggttctt cagattgtcc gacggattgg acacggccgg cggcgtagcc cgcgccagcg
     1981 cgccgggcac cgcaagatca tcggggcgca gattgttgct attgatgaag ctaatacgca
     2041 taacgtacat atagacccag accgcgagcg tcaggaacat ggtcgcgaag aacgggccaa
     2101 aaattgcgtg ctgcgccatg gtggtctcgc tgttgaggtg aagtgagagc ttcggctgcg
     2161 ggacggcggc tacttcggct cccccgccat cacatacgcc cacaaggatt cgacctccgc
     2221 ggcatcgagc aggtcgcccc acggcggcat ctgattcttg cctcgcatca ccgatgaaat
     2281 aaagcggtca tgctggtcgg gcggaaattg gcgcaggtcg aaggcgcttt cgggattctg
     2341 catgcgggtg ccgtggcacg gcgagcagtt gcgcgaaaag atcgcggcgc ctgcccggac
     2401 acgctcgggc ggaaagtctt gcgcggatgt ggttgcgcca acaagcgcga gggtaagcgc
     2461 gccgcccata atgatggcga gcaaatctgc ggacaaatta aatcgcatca tcttatttcg
     2521 atagaccggg atcagctatg gggtgggcaa aggtgcgtgg caccgtcttg ccaggtacca
     2581 cggtcctgtc gcgctgtgcc caccctacaa ttatcgctaa ttcggcagca gcgcgaacgt
     2641 ccacaccgag ccgcccggca ccacgttctg cagcttatcc tttgcgatgt tccaatagag
     2701 gccgccgacg cccgagagca cggtgatgta ttgctggccc ttgtaagtgt acgtcaccgg
     2761 catggcgttg atgccggaac ccgtctggaa ctgccatagc gtcttgccgt tgtcggcgtc
     2821 gagtgcgatg aactcgccgg tctccttgcc ggtgaacagc agccccccgc cggtcgccag
     2881 catcgccgac caatattggt tgtcatagag cggcacccgc cagcgctgct tgccggtgag
     2941 cgggtcgatc gcgtccacgt gaccgatcgg ctggccgttc gatggcatgt tgaggttctc
     3001 gatgaacata tagcgctgcc cggccttgaa ctcctcgatg gtgaggtgct tgtagagccg
     3061 gccctcatgg atggtgttgg catagatgag cccggtgtcc gggttgaagg cagcgtgcgg
     3121 ccagttcttg ccgccgcgag ttgacggcca catctcgatc tgttcgccgg cgcgtacctt
     3181 ccggccgatt tcggtctcga ctggccggcc ggtctccatg tcgatgtggc ttgcccagtt
     3241 caccttctcg tacgggttgg cggcgatgat ggcgccggtg gcacggtcga gcacatagag
     3301 gaagccgttg cggttgagct gcatcaccac cttgcgcttg acgccgttca ccggaatttc
     3361 ggcgaggatc aattcccaca cggcgtcata gtcgtaggca tcgttcggag tgaactggta
     3421 gtgccacacg atctcgccgg ttttcggccg aagggccagt acggatgccg tgtagaggtt
     3481 gtcgcctggc cggctttgcg atgcccaagg tgccgcattg ccggtgcccc aataggtgag
     3541 atcgagatcg ggatcgtagg agccagtgat ccagctggag ccgccgccgt gtaggtaggc
     3601 gtcggtgttc tgcggccacg tctcattgcc cttttcgccg cggcccggga tcgtatagcg
     3661 ccgccacagc tgcttgccgg tctccaggtc ccagccgtcg atgaagccgc ggatgccgaa
     3721 ttcggcgccg gagattccgg tgatcagcac gccattggca atgagcgggg ccacagtcat
     3781 ggaatagcct tcccgccatt ccgcagcctt ggatttccag atttccttgc cggtcttggc
     3841 gtcgagcgcc accacatagg cgtcgagcgt ggtgcggtag atcttgccgt tgtagatggc
     3901 ggcgcccttg ttggagacgc cgcagcagac cacgcgtggc gtctccggca accagtcgac
     3961 cggcgtcttc cagatttgcc ggccggtgcc gacgtcgatc gccaccgtcg ccttggcgtt
     4021 ggtcacgtac atcacgccgt catagatgat gggctgggcc tgctcgcccc actggttgtc
     4081 gaggctcaag ttccatatcg gcaccagtcg cttgatgttg gtcttatcaa tttgcttgag
     4141 cgggctgtaa cggttctggc cataacccat gccataggtg aggatgttgt cggtgttctt
     4201 gccgtcgttc ttgaggtcgt cgagcgtctg tgccgacgcg gcgacgccga gaaaaagcga
     4261 caacaccgct gccgttccga tcgtcttcat gggcgtctcc cg
//
LOCUS       DATILV010000709         2143 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1963035, whole genome shotgun sequence.
ACCESSION   DATILV010000709 DATILV010000000
VERSION     DATILV010000709.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2143
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1963035"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            289..1362
                     /locus_tag="VLJ17_16845"
     CDS             289..1362
                     /locus_tag="VLJ17_16845"
                     /inference="COORDINATES: protein motif:HMM:NF024807.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kelch repeat-containing protein"
                     /protein_id="HSV24683.1"
                     /translation="MIDYRAPTLLGATPFPALAIASFVAVTVAFAPSAWAQGKWRVGA
                     PIPEGANEVIGAALDGQIYVYGGQDSANKPQGLFFRYDPTKNEWTKLQGNPVPVHHGA
                     AAAVGRKLYVFGGFRLPDTGKVGWYPEDKAWVYDVGSATWSALPNIPTARGALAAVAA
                     GKKIYVIGGAGIPKGTQLPDGLSGGGPVELLGTTEVFDTDTSTWSSVAPMPTPRNHHS
                     VAYVDGKIYAIGGRVGSCFSNGWSSNIWMNDAYDIATNTWTPRAPMPTARSGTGIGVI
                     DGKIHVLGGEGWIEDFGGVFRAHEIYDPKTNTWTRAPRMLTPRHGFAVTEIGKAIYAV
                     SGVNNAGGAGTLSVVAVNEIFEE"
     gene            complement(1563..1826)
                     /locus_tag="VLJ17_16850"
     CDS             complement(1563..1826)
                     /locus_tag="VLJ17_16850"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSV24684.1"
                     /translation="MRNNTAESRFELDADGHTALAFYRIEPGVITFVHTEVPQALSGR
                     GLGSRLVRGALEQARALGLKVVPKCPFVSAYMGKHPEFNDLLA"
     gene            complement(1911..>2143)
                     /locus_tag="VLJ17_16855"
     CDS             complement(1911..>2143)
                     /locus_tag="VLJ17_16855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009031952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSV24685.1"
                     /translation="NCAGRHTHPGVESTYVMDGEILLKVEGKPDQKFKAGDSFQIPVG
                     TAHDACTIPGQAFKVLATYIVEKGKPLASPAP"
BASE COUNT          420 a          653 c          664 g          406 t
ORIGIN      
        1 atgcgatccg acgacccggg ccacacgatt ggcgaactgt taaccgcatg taaggcagca
       61 accgcggcct cggacttgtc cggtattccg agaggccttg tcgggagccg ctaaagtgtg
      121 cgaccgttta gttaaggtcc aatcatcggg gcgtcgggga tggcctagtg aatcacacat
      181 tttccagttg tctatatcgc ccaaacaatt tgcggcgatc cggtatccac tcggtcagga
      241 cttgcagttg cctacatgaa gcccgggcaa acagcttcgg aggacaccat gatagactat
      301 cgagcgccca cgttacttgg cgcgacgccc tttccggcac tggcgattgc atctttcgtc
      361 gccgttacgg tggccttcgc gccaagtgct tgggcgcaag ggaagtggcg ggtcggcgcg
      421 ccgatccctg aaggcgccaa cgaggtcatt ggcgctgcgc tggatgggca gatttatgtc
      481 tacggcggcc aggactcggc caataaaccc cagggcctgt tcttccgcta tgatccgacc
      541 aagaacgaat ggaccaagct gcagggcaat ccggtgccgg tccatcacgg tgcggcggct
      601 gcggtcggac gcaagcttta cgtatttggc ggcttccggc tgcccgacac cggcaaagtc
      661 ggctggtatc cggaggacaa ggcgtgggtg tatgatgtcg gcagcgcgac ctggtcggcc
      721 ctaccgaaca taccgaccgc tcgcggtgcg ctcgctgccg tcgcagccgg caagaagatt
      781 tatgtgatcg gcggcgccgg cattccgaag gggacgcagc ttcccgacgg actttcgggc
      841 ggcggcccgg tcgaactcct cggcactacc gaagtgttcg acaccgatac cagcacatgg
      901 tcgagcgtcg ccccgatgcc gacaccgcgc aaccaccaca gcgtcgccta tgtggatggc
      961 aagatttacg ccataggcgg acgcgtcggc tcatgctttt cgaacggctg gtcgtcgaac
     1021 atctggatga acgacgccta cgatatcgcc accaacacat ggacgccccg tgcgccgatg
     1081 ccgacagcgc gctccggcac cggcataggt gtcatcgacg gcaagatcca cgtgctgggc
     1141 ggcgagggct ggatcgagga tttcggcggc gtattccgcg cccacgaaat ctacgatccc
     1201 aagaccaaca cctggacgcg cgcgccacgc atgctcacgc cgcgtcacgg ttttgcagtg
     1261 accgagatcg gcaaggcgat ctacgcggtg tccggcgtca acaatgcggg cggcgccggc
     1321 accctctcgg tcgtcgctgt caacgagatt ttcgaggaat aagcgggcga cgacgcctcg
     1381 ctttcgctaa acgaacgtgc tgcgactcgc ggtgcgagcc gcgcgaggcg gctgttggcc
     1441 agctaaccag gaggggccta tccgctggat aacgctttca gcccgcgaaa ctgtttttgg
     1501 cttcgatcat agccgcggtg agccggcata gggctgtcga cggtgggtgt ttcgaattgc
     1561 cattacgcca acagatcgtt gaactcggga tgcttaccca tataagcgga aacgaacggg
     1621 catttaggca ccactttaag ccccagcgcc cgggcttgct ccaaagcgcc gcgcaccaga
     1681 cgcgatccta ggccacggcc ggacaacgct tgcggcacct ccgtatgcac gaaggtgatg
     1741 acaccgggtt ctatgcgata aaaagcaagc gcggtgtgcc cgtcggcgtc gagctcaaag
     1801 cgactctcgg cggtgttgtt gcgcatcctt gtaagattga ttttgcagaa cagattgatc
     1861 cagccaaggg aaggcgggca acggcgctca ccgcggcccg ctcacaggcg tcacggtgcc
     1921 ggcgacgcca gcggcttacc cttctcgacg atataggtgg ccaacacttt gaacgcttgg
     1981 cccgggatcg tgcatgcatc atgcgctgtg ccgaccggaa tctgaaaaga gtcacctgcc
     2041 ttgaatttct gatcaggctt gccttcgacc ttgaggagta tctcgccgtc catgacgtag
     2101 gtgctctcga cgcccggatg agtgtggcgg cccgcgcagt tgc
//
LOCUS       DATILV010000710         6369 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_5024150, whole genome shotgun sequence.
ACCESSION   DATILV010000710 DATILV010000000
VERSION     DATILV010000710.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6369)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6369)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6369
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5024150"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1252
                     /locus_tag="VLJ17_16860"
     CDS             <1..1252
                     /locus_tag="VLJ17_16860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase subunit alpha"
                     /protein_id="HSV24686.1"
                     /translation="GIRLKRANAVGDRIFIEGNSAAALGAVYGGATVCAWYPLTPSSS
                     LADAFTSYCSKLRHDKTTGKANYAIIQGEDEIASIGIVVGAGWNGARAFTATSGPGIS
                     LMQEFCGLAYFAEIPAVIFDVQRAGPSTGMPTRTQQSDVLNTAYASHGDTKHVVLFPQ
                     APGETFEFSALSFDLAERLQTPIFVLMDLEIGMNQHLTAPLAWDDRRTYDRGKIMAAA
                     ELDAGKDFGRYLDVDGDGIPFRTLPGAHPNRGSYFTRGTSRDRYARYTEEGDAYADNM
                     QRLLRKFETAKNLVPRPVRRNADKPTKCGVIYYGSTAPAMDEAIIMLQERGNRLDMLR
                     IRAFPFHQDVADFIAEHEFVFLVEQNRDAQLRSLIVNECGIDPQRIMPILHYDGTPIT
                     ARFIARAIGENLDALKVAPLRVVS"
     gene            1273..1443
                     /locus_tag="VLJ17_16865"
     CDS             1273..1443
                     /locus_tag="VLJ17_16865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24687.1"
                     /translation="MRGSGNVFRDFGDPDSELERAQAILAAKIMAVLDARQLKVRQPK
                     SRQAMRRSSFRN"
     gene            complement(1641..1832)
                     /locus_tag="VLJ17_16870"
     CDS             complement(1641..1832)
                     /locus_tag="VLJ17_16870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24688.1"
                     /translation="MKIKLTQRKKQLRPDTNRHLRFYMQYPDNAFRDLMATSAAGGAT
                     INYRIGIMWRRGAGQIGEA"
     gene            1904..2950
                     /locus_tag="VLJ17_16875"
     CDS             1904..2950
                     /locus_tag="VLJ17_16875"
                     /EC_number="1.11.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008965033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HSV24689.1"
                     /translation="MHLLPGNIFRLAATVGAVSVITAVSNMPSNGQTNSSPSVEKLKA
                     DYRRPYSIPFPKENPYTATKAALGKSLYFDTRLSGANLLSCASCHSPAYGWGDGQPKG
                     VGHGMKQLGRRSPTIVNAAYGQVFMWDGRAPSLEEQALGPIKTDVEMNMPVEKLIEKL
                     QGIVEYGPLFQAAFPGEGMSLDHVAKAIATYERTVVSGYAPFDAWIDGNEKAISPDAK
                     RGFALFNAKAACAKCHSGWNFTDDSFHDIGLPDADIGRGKFLPNVVKMQQAFKTPGLR
                     EISRRGPYMHNGSIATIDAVIDHYNDGGINRPSRSALIQPLGLTKQEKSDLVAFLKTL
                     TSDMDPTIVPTLPR"
     gene            3039..3662
                     /locus_tag="VLJ17_16880"
     CDS             3039..3662
                     /locus_tag="VLJ17_16880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24690.1"
                     /translation="MSIRFAPMSALTLLLATGTAVCGFIRGGDAADLRVLPRHGAEIS
                     GAEQYAGNAISGAEAAYASATRGDIPNGSAPAAAAPGHVLAARARFVEARALLERALL
                     LRDRTGKADINALEGHMAALFSELNAVERTRQAGAENVKTALSLAREWREEGMKIVAP
                     PAGGLLELPLPITVVRKAEALSRAIDQLAERPTSRPRVQSAKQDAWQ"
     gene            3685..3987
                     /locus_tag="VLJ17_16885"
     CDS             3685..3987
                     /locus_tag="VLJ17_16885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007751245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HSV24691.1"
                     /translation="MGLTFGFGGGIGALAAEHIIGQKGKTFSEPEVTIKVGETLVYMN
                     DDNIAHNIMSTTPGNDFNFGTQDPGASIPVTFKAAGDVKVTCAIHPRMQMTVKVEK"
     gene            4015..5733
                     /locus_tag="VLJ17_16890"
     CDS             4015..5733
                     /locus_tag="VLJ17_16890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009026096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSV24692.1"
                     /translation="MSIRYKLIIAFGIVLCFAAGAAFYGISAVSNAGDLVVRLYDEPF
                     IAVSYARAAQVRFGDARAAMVRGLTSHDAQTDVGLIEAAVTDVKEELGIVGERMAHAG
                     TKDKTKKAIEMVDAWYQAGLKIVKPGAGGVTALPWSATIVRQSEAVAETLDEIVESAS
                     AYGFKFRDSAGEEVAAARLNLILLTAATTVTGILMSIGIAYSFSRPIRYAMMIAERIA
                     GGNLSEEISTQRRDELGRLIVSLGAMQGALRSQADFERQAMEGKDRAEANRRAAEVKA
                     EAEKRAAQVKSEADRKAAVLKLADEFEAAVGGIIEAVSSTSTQLEASARSLANTASVT
                     QQLSATVAGASEEASANVSSVAAATEEMSSSIGDIGRQVQESSKIAVDAVKQAQQTDV
                     RINELSTAASRIGDVVKLITAIAEQTNLLALNATIEAARAGEAGRGFAVVAQEVKTLA
                     TQTAKATDEISTQIAGMQTATQESVAAIKAIGYTIERISQISAGIAAAVEAQGAATGE
                     ISRSIGEAARGTAEVATNITDVNRGASETGSASTQVLSSAQSLANESNHLKTEVGKFL
                     RSVRIA"
     gene            complement(5769..5927)
                     /locus_tag="VLJ17_16895"
     CDS             complement(5769..5927)
                     /locus_tag="VLJ17_16895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24693.1"
                     /translation="MMWFSQLAYETGKPATIAAVARGWGWGSALWGRWLGKAERSGFG
                     ASFRQERG"
     gene            complement(6179..>6369)
                     /locus_tag="VLJ17_16900"
     CDS             complement(6179..>6369)
                     /locus_tag="VLJ17_16900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24694.1"
                     /translation="EMNALGWSFRSRTARIGPAMVFDEYTMVESSFDDRFAAAFEVSS
                     VSQPSIIQRMMDPIGAIP"
BASE COUNT         1375 a         1944 c         1842 g         1208 t
ORIGIN      
        1 cggcatcagg ctcaagcgcg caaatgctgt cggcgaccgt attttcatcg agggcaattc
       61 ggccgcggcg ctcggtgccg tctatggggg cgccacggtg tgcgcgtggt atccactcac
      121 gccgtcgtct tcgctcgccg acgctttcac cagctattgc agcaagctgc gccacgataa
      181 gactactggc aaggcgaact atgccatcat ccagggcgag gacgagatcg cctctatcgg
      241 catcgtggtc ggcgcaggct ggaacggcgc ccgcgccttc acggccacct cgggacccgg
      301 catctcgctg atgcaggaat tttgtgggct cgcctatttc gcggagattc cagccgtgat
      361 cttcgacgtg cagcgcgctg gcccctccac cggcatgccg acccgcaccc agcaatccga
      421 tgtgctcaac accgcttatg cctcccacgg cgacaccaag catgtggtgc tgttcccgca
      481 ggcccccggc gagaccttcg aattctcagc gctgtccttc gaccttgccg agcgcctgca
      541 gacaccgatc ttcgtgctta tggatcttga gatcggcatg aaccagcatc tcacggcgcc
      601 gctcgcctgg gacgaccgac gcacatatga ccgcggcaag atcatggctg ccgccgaact
      661 tgacgccggc aaggacttcg gccgctatct cgacgtcgac ggcgacggca tcccgttccg
      721 cacgcttccg ggcgcccacc ccaacagagg ctcctatttc acgcgcggca cctcacgcga
      781 ccgctatgcg cgctacaccg aggagggcga tgcctacgcc gataacatgc agcgcctgtt
      841 gcgcaagttc gagaccgcca aaaacttggt cccgcgcccc gtgcgccgca acgccgataa
      901 gccgaccaaa tgcggcgtca tctattatgg ctccaccgcc cccgccatgg atgaagcgat
      961 catcatgttg caagaacgcg gcaaccgcct cgacatgctg cgtatccgcg ccttcccgtt
     1021 tcaccaggac gtggcggatt tcattgccga acacgagttc gtgttcctgg tcgagcagaa
     1081 ccgcgacgcg cagttgcgct cactgatcgt gaatgaatgc ggcatcgacc cgcagcggat
     1141 catgccgatc ctgcactacg acggcacccc aatcaccgcg cgattcatcg cgcgcgcgat
     1201 cggggagaat ctggatgcgc tgaaggtggc gccgttgcgg gtggtgagct gatcggaaaa
     1261 acttgaagtc gtgtgcgtgg cagcggtaac gtattccgcg atttcggcga tccggattcc
     1321 gagcttgaac gggcacaggc catcctcgcc gccaagatca tggctgttct tgacgcgcgc
     1381 cagttgaagg tccgccaacc gaaaagccga caggcgatgc ggcgttcgag ttttcgcaac
     1441 tgagcgcttc acaacaggtc gatgattacg atcctcggca aactcgatca agacgttgaa
     1501 ctgactgtca aggttcagcc gcgcgctgaa aacgaacgca cgaaacgtcg agcgtggcgc
     1561 gcgaattgcc tcagccccag ttctcgcgag acgcgctacg tcgataggcc ccggcgtaac
     1621 cttgatcgtc gcgccgctga tcacgcctcg ccaatctggc ccgccccgcg gcgccacata
     1681 ataccgatcc gataattaat cgtggccccg cctgcggcag acgtggccat cagatcacgg
     1741 aaagcattat cgggatattg catgtaaaat cgcaaatgtc gatttgtatc tgggcgtaat
     1801 tgctttttgc gctgcgttaa cttgattttc atgcggttaa cttaactgtt tcgcagaaac
     1861 tgatgaaggt cgcggagcga tcgcctttct ttggagaaac caaatgcacc tcctgcctgg
     1921 caatattttt cgcttagccg cgaccgttgg tgctgtctcg gtaataactg ccgtcagcaa
     1981 tatgccaagc aacggccaga cgaacagcag tccatccgtc gagaaattga aggcagatta
     2041 ccgtcggcct tattcaatcc cgttcccaaa agaaaatccc tacaccgcga caaaggctgc
     2101 actcggcaaa tccctctatt tcgacacgcg gttgtcgggc gccaatctgc tgtcttgcgc
     2161 ctcctgtcat agccccgcct acggatgggg ggatggtcag ccgaagggag ttgggcatgg
     2221 tatgaagcag cttggccgcc ggtcgcccac gatcgtgaac gccgcttatg gtcaggtgtt
     2281 catgtgggac ggccgggcgc cctcgcttga ggagcaagcg cttgggccga tcaagaccga
     2341 tgtcgaaatg aacatgccgg tcgagaaatt gatcgagaaa ctccagggca tcgtggaata
     2401 cggcccgcta ttccaggctg cgtttccggg cgaagggatg tcgctcgatc acgtcgcaaa
     2461 ggccattgcc acctacgagc gcaccgtcgt ttccggctat gctccattcg atgcctggat
     2521 cgacggcaat gagaaggcga tctcgccgga cgcaaagcgc ggatttgcgc tgttcaatgc
     2581 caaggcggct tgcgcgaagt gccacagcgg ttggaatttc accgatgaca gctttcacga
     2641 catcggtctt ccggatgccg atattggtcg cggaaaattt cttcccaatg tcgtcaagat
     2701 gcagcaggcg ttcaaaacgc ccggcctgcg ggaaatcagc cgccgcggcc cctacatgca
     2761 caatgggtcg atcgcgacga tcgacgccgt catcgatcac tataatgacg gcggcatcaa
     2821 tcggccgagt cgatcagcac tcatccagcc gctcggcctg accaagcagg agaagagcga
     2881 tctcgtcgcc ttcttgaaaa ctcttaccag cgatatggat cccaccatcg ttccgacgct
     2941 gcctcggtaa cgccttgcca ccactacccg tttcgttttc tcacgcccat agaggcctgt
     3001 agagacgata acccacttaa gctcaaggat accacacaat gtcgattcgg ttcgccccaa
     3061 tgtctgccct caccctcttg ctggccactg gaaccgccgt ctgtggcttc attcgcgggg
     3121 gcgacgccgc cgacctgcgg gtcttgcccc gccatggagc cgagatatcc ggcgccgaac
     3181 agtacgccgg aaatgcaatc agtggcgccg aggccgcgta cgcaagcgct acccgcggtg
     3241 atatccccaa cggcagcgcg cccgccgcag ctgcgccagg tcatgtactg gcggctcgcg
     3301 cgcgattcgt cgaggcccgc gccctgctgg agcgcgccct tctactgcgc gatcgcactg
     3361 gcaaagccga tatcaatgcg cttgaaggcc acatggcagc gctgttttcc gaactcaatg
     3421 cggttgaacg gacgcgtcaa gccggcgccg agaatgtcaa gaccgcgttg agcctggcgc
     3481 gggagtggcg cgaggaagga atgaagattg ttgctccgcc ggccgggggg ttgctggaac
     3541 tgcctctgcc gatcacggta gtgcgaaagg ctgaggccct ttcccgtgca atcgatcagt
     3601 tggctgaaag acccacaagc cggccgcggg ttcagtcggc aaaacaagat gcgtggcaat
     3661 aaaatgagaa tattcacatc actgatgggg ctgacattcg gtttcggcgg cgggatcggc
     3721 gcgctcgcgg ccgaacacat tatcggccaa aagggaaaaa cattttctga gcccgaggta
     3781 accataaagg ttggcgagac gcttgtttat atgaatgacg acaatattgc tcacaacatt
     3841 atgtcaacga cccctggcaa tgatttcaat ttcggcaccc aagaccctgg tgcgtcgatc
     3901 ccagtaacct tcaaggccgc tggggatgtt aaggtcacct gtgcaatcca tccgcgcatg
     3961 caaatgaccg tcaaagttga aaaatgaggc ggcttttgtt tgtcagggct agtcatgtcg
     4021 attcggtata agttgattat cgcatttgga atcgtgctat gcttcgccgc gggcgctgcg
     4081 ttttacggca ttagtgcagt ttcaaatgcc ggcgatcttg tggttcgact ctacgacgag
     4141 ccattcatag ccgttagtta tgcacgcgcc gcacaagtac gctttggcga tgcgagggcc
     4201 gcaatggttc gcggtctcac ctcccatgac gcacaaaccg acgtcggctt gatcgaagcc
     4261 gctgttacgg atgtcaagga ggagttgggt atcgtcgggg agcgcatggc gcacgccggc
     4321 accaaggaca agactaagaa agcaattgaa atggtcgatg cctggtatca ggccggccta
     4381 aagatcgtca aaccgggtgc gggcggggtc accgcgttgc cgtggtcagc cacgattgtc
     4441 cgccagtccg aagcggtcgc cgagacactc gacgaaatcg tcgaatctgc gagcgcctat
     4501 gggtttaagt ttcgggatag cgctggggaa gaggtggccg cggcgcgact aaacctgatc
     4561 ctcctaacgg cggcgacgac ggttacggga attctaatgt cgattggaat tgcctattcg
     4621 ttcagccgcc caattcgata tgcgatgatg atcgccgaaa ggattgcggg aggaaatctt
     4681 tcagaggaaa tttcgacgca acgtcgcgac gaactggggc gactcatcgt ttcgctgggg
     4741 gcgatgcaag gtgccttgcg atcccaggcc gatttcgaac gtcaggctat ggaaggcaaa
     4801 gacagggcgg aggcaaaccg cagggccgcc gaggtgaaag cagaggctga gaaaagagcc
     4861 gcgcaagtga aatccgaggc tgaccgcaag gccgcggtgc tcaaacttgc cgatgagttt
     4921 gaggctgccg tcggcggcat catcgaggcg gtatcgtcca cctcaaccca actcgaagct
     4981 tcggcacgca gcctggctaa caccgcgtcc gtgacccagc aactttccgc cacggttgct
     5041 ggggcatcgg aagaagcctc tgccaacgta agctcggtcg ccgcggcgac cgaggagatg
     5101 tcctcctcga tcggggacat cggccggcag gtgcaggaat ccagcaagat cgccgttgac
     5161 gctgtcaaac aggcgcaaca gaccgatgta cgcatcaatg aactctccac cgccgcgtcc
     5221 cgtattggcg acgtcgtaaa gctcatcacg gcgatcgccg aacagaccaa tctgctcgcg
     5281 ctcaacgcca ccatcgaggc ggcccgggcc ggcgaggccg gcaggggctt cgcagtggtg
     5341 gcccaggagg tcaaaacgct ggccacccag accgcgaagg cgaccgacga gatcagcacc
     5401 cagatcgccg gcatgcagac cgcaacgcag gagtcagtcg ccgccatcaa ggcgatcggc
     5461 tacaccatcg aaagaatttc gcagatttcc gcgggtatcg cagcggcggt ggaagcacaa
     5521 ggcgcggcaa ctggtgaaat ctcgcgcagt atcggggagg ccgcaagggg aactgcggag
     5581 gtcgccacca atatcaccga tgtgaatcgc ggcgctagcg agaccggctc ggcttcgacc
     5641 caggtgctgt cgtcagccca atcgctggcg aacgaaagca accacctgaa gacggaagtc
     5701 ggcaagttcc ttaggtccgt caggatcgca taacgaacgc gaaacgccgt gcacccggca
     5761 agccaccttc agcctcgctc ctgccgaaac gacgcaccaa atccgcttcg ctccgcttta
     5821 ccgagccagc gcccccataa tgccgatccc catccccagc cccgcgcgac tgccgcgatg
     5881 gtcgccggct tgccggtttc gtaggcgagc tgagaaaacc acatcatggc gcgggccaat
     5941 gggaaaaatt ggccgccgtg tcgaacattg caaatgcgac agcgctgtaa aggtttggag
     6001 aaagcttgac caggacgctc acgaaaaatc tccaggtacg ctgacgccgt cctttttggc
     6061 ggacagcgtt acccggatat cgcgcacagc gtaggtcttt ctcctaactg ccagccaaac
     6121 tcgccagctc taagtagccc gccgttacaa cggcgaacgg ttgaattccg ccaatagcct
     6181 acggaatggc tccaatcgga tccatcatgc gctggatgat ggatggctgg ctgacggaac
     6241 tgacctcaaa agccgcagca aatcgatcgt cgaatgaact ctcgaccatc gtatactcgt
     6301 cgaacaccat cgccggaccg atccgcgcag tccggctgcg gaagctccag cccagcgcat
     6361 tcatttcac
//
LOCUS       DATILV010000711         3784 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_5024342, whole genome shotgun sequence.
ACCESSION   DATILV010000711 DATILV010000000
VERSION     DATILV010000711.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3784)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3784)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3784
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5024342"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..123
                     /locus_tag="VLJ17_16905"
     CDS             <1..123
                     /locus_tag="VLJ17_16905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005621947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HSV24695.1"
                     /translation="IRTHKRLLDILDPTPQTVDALMKLDLPAGVDVEIKAFGKQ"
     gene            132..788
                     /gene="rplC"
                     /locus_tag="VLJ17_16910"
     CDS             132..788
                     /gene="rplC"
                     /locus_tag="VLJ17_16910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000579825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HSV24696.1"
                     /translation="MNGIIGKKVGMTQIFAPDGTVTPVTVIKAGPCVVVQKKSAGGKD
                     GYDAVQVGLVEDRPIKLKNVNKPMRGHFEKTGGGIPPTRVLKEFRLEAADDSTSVGDK
                     ILVDQFADGDIVDVVGRSKGRGFAGTIKRHNFSRGPESHGSMNVRAPGSIGQSAYPSR
                     VIKGMRSSGHMGDERVTVKRLTVARVDAENNLLMIRGAVPGANGTVVVVKKAARQAKR
                     "
     gene            832..1560
                     /gene="rplD"
                     /locus_tag="VLJ17_16915"
     CDS             832..1560
                     /gene="rplD"
                     /locus_tag="VLJ17_16915"
                     /inference="COORDINATES: protein motif:HMM:TIGR03953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HSV24697.1"
                     /translation="MPTVKIMDLTSAKVGEIELADTVFGVALNEPLIHEAVRSFLANR
                     RAGTSATKTRGDVSGSGRKLWKQKGTGRARIASLRSPLWKGGGNAHGPQPRDWSYNLP
                     KKMRKRAMCSALSERLREGNLIIVDEWRFDQGKTKEFINALGTLKLSGKTLIVDSLKN
                     TKLMLASRNVQTAKVVNSYGVNIYDLINHQKLVLTPKVVEELTGILQPRARDDEEERY
                     QSHSSGGETAKPARRQPRDRGVHA"
     gene            1564..1869
                     /gene="rplW"
                     /locus_tag="VLJ17_16920"
     CDS             1564..1869
                     /gene="rplW"
                     /locus_tag="VLJ17_16920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009463005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HSV24698.1"
                     /translation="MRTVWDVIKSPVITEKALVAKEETQDRRQLLTFRVDRRATKPEI
                     KKAVESIFQVKVEDVHTANYLGKMARRGRHEGRKPSWKKAFVTLKHGEKPVDYGEAI"
     gene            1904..2734
                     /gene="rplB"
                     /locus_tag="VLJ17_16925"
     CDS             1904..2734
                     /gene="rplB"
                     /locus_tag="VLJ17_16925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004924105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HSV24699.1"
                     /translation="MGIKKLTPTSPARRYQTYLTRDELTAGAVPEKSLLEPKTRISGR
                     NNDGRITVRRRGGGHKRFYRIIDFKRDKDGVPGRITQIEYDPNRSSNIALVSYVDGEK
                     RYIIAPVGLEVGKTITSGEDADILPGNTLPIRNIPLGTQIHNIEMRPGKGGQMARAAG
                     SFAQLLAKEGAYAQLRMPSGEVRRVPVECRATVGQVGNVEHENISLGKAGRTRWRGIR
                     PHVRGVAMNPVDHPHGGGEGKTSGGRNPVTPWGQPTRGYKTRRNKRTKKMIVRDRRVK
                     "
     gene            2774..3109
                     /gene="rpsS"
                     /locus_tag="VLJ17_16930"
     CDS             2774..3109
                     /gene="rpsS"
                     /locus_tag="VLJ17_16930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007569276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HSV24700.1"
                     /translation="MPRSVKKGAWVDKGIQKVVERIRAGSQRPQVIRTWSRRSTITPE
                     MVGLTFGVHNGKRHIPIYVTENMVGHKLGEFSPTRTFKGHSGTKAEKSEKTAKVSGAS
                     GSSAPPPAS"
     gene            3127..3756
                     /gene="rplV"
                     /locus_tag="VLJ17_16935"
     CDS             3127..3756
                     /gene="rplV"
                     /locus_tag="VLJ17_16935"
                     /inference="COORDINATES: protein motif:HMM:TIGR01044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HSV24701.1"
                     /translation="MRTWLDLYKKMEARASAKYLRGSAQKARLVIDMIRGKNVNQALA
                     ILRFSSKRAALGIEKCVKSAIANASEAAEKANIAVDPDELWLKAAFVDRGPTKHRSRM
                     RPAPQGRAFRERRHFCHVTVLVSSDKQGGDTKTAGKLAETTTPVASKRAKRGGAAAAP
                     RARRVTPRAEAESVEKKTAAPKQAAKGEKKSGKTPSKPGKTAGRKKAEE"
BASE COUNT          935 a          932 c         1226 g          691 t
ORIGIN      
        1 atccgcaccc acaagcggct gctggacatt ctcgatccga caccgcaaac ggtggatgcg
       61 ctgatgaagc tggatcttcc tgcgggtgtg gatgtcgaaa ttaaagcgtt cggaaagcaa
      121 tagctgaaat gattaacgga atcatcggca agaaagttgg catgacgcag atatttgcgc
      181 ctgatggcac ggtcactccg gtgacagtca tcaaggccgg gccgtgcgtc gtcgtgcaga
      241 agaagtcagc gggcggcaag gatggctatg acgccgtgca ggttggattg gtcgaagatc
      301 ggcccatcaa actgaagaac gtcaacaagc cgatgcgtgg ccactttgag aaaaccggcg
      361 gcgggattcc cccgacgcgc gtgctgaaag agtttcgcct ggaagctgct gatgacagca
      421 ccagcgtggg cgataaaatt ttggtagatc agttcgctga cggcgacatc gtggacgtgg
      481 tgggaaggtc gaaggggcgc gggtttgcgg gcactatcaa gcgtcataat ttcagtcggg
      541 gtcctgagtc gcacggttca atgaatgtgc gcgccccggg atcaattggc cagtcggctt
      601 atccgtctcg tgtgatcaag ggcatgcgat cctcaggcca catgggcgat gagcgggtga
      661 cggtaaagcg tctaacggtc gcgcgagttg atgcagagaa taatctgttg atgattcgcg
      721 gcgcagtgcc gggtgcgaat ggcaccgtgg tcgtggtgaa gaaggcagcc agacaggcga
      781 agagatagcg atacagaccg ctggtcttgt atctgaagcg gaggttcggt tatgccaaca
      841 gtcaaaatca tggacttgac cagcgcaaag gttggcgaga tcgagttggc tgacacggtg
      901 ttcggcgtgg ccctgaatga gccattgatt cacgaagcgg tgcgcagctt cctggctaat
      961 cggcgcgcgg gcacctcggc gacgaagacg cgcggcgatg tctcgggctc ggggcgcaag
     1021 ctctggaagc agaagggtac cggccgggcg cgcattgcca gtttgcgttc gcctttgtgg
     1081 aaaggcggcg gcaacgctca cggaccacag ccgagggact ggtcgtataa cttgcccaag
     1141 aagatgagga agagggcgat gtgttcggct ctttctgagc gcttgcgcga gggcaatctg
     1201 atcatcgtag acgagtggag attcgatcag ggaaaaacca aagaatttat taatgccctg
     1261 ggcactttga agctgagcgg aaagaccctg attgtggatt cgctgaagaa tacaaagctg
     1321 atgctggcct cgcgcaacgt gcagactgcc aaggtagtga acagctatgg cgtgaacatt
     1381 tacgatctga ttaatcacca gaagttggtg ctgacgccga aggtggtcga ggaattgacc
     1441 ggcatcctgc aaccgcgggc cagggacgac gaggaagagc gctatcaatc acactcgagc
     1501 ggaggcgaaa cggccaaacc ggcccgccgc caaccgaggg acagaggagt tcatgcttaa
     1561 cccatgcgaa ccgtttggga cgtaatcaaa tcgccggtca tcacggaaaa agcgctggtg
     1621 gccaaagaag agacgcagga ccggcgccag ttgctgacgt tccgcgtgga tcgtcgcgcg
     1681 accaagcccg agattaagaa ggcggtcgag tcgatttttc aggttaaggt tgaggatgtg
     1741 cataccgcca actatctcgg caagatggcc cggcgtggaa ggcacgaagg ccgcaagcct
     1801 tcctggaaga aagcatttgt gacgctgaag cacggtgaaa agccggtaga ttacggggaa
     1861 gcgatttaac aaattcgaat ttcgaatttc gaaattaaaa gttatgggca tcaagaagct
     1921 aacaccgaca tcgcccgccc ggcgctatca gacttatctg acgcgtgacg agttgactgc
     1981 gggcgcagtg ccggaaaagt ccctgctgga accgaagacg cgcatctcgg gtcgcaataa
     2041 tgacggccgc atcacggtgc ggcgacgggg cggcggacac aagcgtttct atcgcattat
     2101 cgatttcaaa cgcgacaagg atggagtgcc gggccgcatt acgcagatcg aatacgatcc
     2161 gaatcgctct tcgaacatcg ctctggtgtc atatgtcgac ggcgagaagc gttacattat
     2221 cgctccggtc ggtctggaag tcggaaagac gattaccagc ggagaagacg cggacattct
     2281 gcctggaaat actttgccga tccgtaatat tcctttgggc acgcagattc acaatatcga
     2341 gatgcgtccc ggtaaaggtg gacagatggc gcgcgcggcc ggatcgttcg cgcagttgct
     2401 ggccaaggaa ggcgcttatg cgcaattgcg tatgccttcc ggcgaagtgc ggcgcgttcc
     2461 ggttgaatgc cgggcgaccg tgggccaggt gggcaacgtc gagcatgaaa atatctcttt
     2521 gggtaaagcc gggcgcactc gctggcgcgg tattagaccg cacgtgcgcg gcgtggcgat
     2581 gaatccggtg gaccatccgc acggcggtgg cgagggtaag acctccggcg gccgcaatcc
     2641 ggtgacacct tggggacagc cgacacgcgg ctataagacg cgccggaaca agcgcacgaa
     2701 gaagatgatt gtgagagatc ggagagtcaa gtaatttcga aattcggatt tcgaaattcg
     2761 aaatggaaag cctatgccac gttcagtaaa aaaaggcgcc tgggtcgata aaggcattca
     2821 gaaagttgtc gagcgtattc gcgcgggttc gcaaaggccg caggtaatcc gcacctggtc
     2881 gcgacgttcg acgattacac ccgagatggt gggcctgacg tttggcgttc acaacggtaa
     2941 gcggcacatt ccgatttacg tcactgagaa catggtcggt cacaagctgg gcgagttttc
     3001 accgacgcgg acgttcaaag ggcactctgg aaccaaggcg gaaaagtcgg aaaagactgc
     3061 gaaggtgtcg ggagcgtccg gtagttcagc gccgccgccg gcaagttaaa gaaaagatgc
     3121 aggtccatga ggacctggtt ggacctatat aagaagatgg aagcaagagc aagcgcaaag
     3181 tatctccgcg ggtcagcgca aaaagcgcgc ctggtgatcg acatgatccg gggtaagaac
     3241 gtcaaccagg ccctggcgat tctgcgtttt tccagcaagc gcgcggcgct gggaattgag
     3301 aaatgcgtca agtcggcaat cgccaatgcg agtgaggcgg cagagaaggc gaacatcgcc
     3361 gtcgaccccg acgagctctg gctaaaagcg gcgttcgtcg atcggggacc gaccaagcat
     3421 cggagccgca tgcgaccagc gccccagggc cgggcattcc gcgagcggcg acacttttgc
     3481 catgtaacgg ttttggtttc cagtgacaag cagggtggcg atacgaagac ggctggtaag
     3541 ttagctgaga cgacaacgcc agtggcaagc aagcgagcga agcgcggtgg agctgcggcc
     3601 gcacctcgtg ccaggcgagt gacgcccagg gcggaagctg aaagcgttga gaaaaaaacc
     3661 gctgcgccga agcaggcagc aaagggtgag aaaaaatcag gtaagactcc gtcgaagcca
     3721 ggcaagacgg ccggacggaa aaaggccgag gagtaaatct caagtttgag atctcagatt
     3781 tcaa
//
LOCUS       DATILV010000712         1742 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2728559, whole genome shotgun sequence.
ACCESSION   DATILV010000712 DATILV010000000
VERSION     DATILV010000712.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1742)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1742)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1742
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2728559"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..723)
                     /locus_tag="VLJ17_16940"
     CDS             complement(<1..723)
                     /locus_tag="VLJ17_16940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012651346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HSV24702.1"
                     /translation="MNVAENSGSLLKPAKLNTTVAVEMIGVNKWFGDFHVLRDINLKV
                     TGGERIVICGPSGSGKSTMIRCINRLEEHQVGRVVIDGVELIADLKKIDEVRREVGMV
                     FQHFNLFPHLTVLDNCTLAPIWVRKMPKKQAEEIALHYLERVKIPEQAHKYPGQLSGG
                     QQQRVAIARALCMNPKIMLFDEPTSALDPEMVKEVLDTMIGLAEDGMTMLCVTHEMGF
                     ARSVADRVIFMADGKIVEQGPPA"
     gene            complement(733..>1742)
                     /locus_tag="VLJ17_16945"
     CDS             complement(733..>1742)
                     /locus_tag="VLJ17_16945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HSV24703.1"
                     /translation="IALLLAWAIPELVGFLVIDAVWSGSDRDACLESVQHREIGACWP
                     FVWERLPYFIYGSYPIPQRWRVDLFFAMLAIGIVWLLWLNAPRRDLGIIYFFIILPVA
                     SFILLTGWAVIGLQPVDTVLWGGVLVTIVVASVGIVFSLPLGILLALGRRSHMPAVRT
                     LSVIFIEFVRGVPLITVLFMAGVMLPLFVPESLSPDKLVRALVGIAMFASAYMAEVVR
                     AGLQAIPKGQYEGAMAVGLRYWQMMRLIILPQALTVTIPNIVNTYIGLFKDTTLVFIV
                     GIFDLLRTIEVARIDPKWATPVTSTTGYAVAAIFYLIFCYGMSRYARAMEARLARADR
                     R"
BASE COUNT          409 a          534 c          489 g          310 t
ORIGIN      
        1 tgccggcgga ccctgctcga cgatcttgcc gtccgccatg aagatgacgc ggtcggccac
       61 gctgcgcgcg aagcccatct cgtgcgtcac gcacagcatg gtcatgccgt cttcggcgag
      121 gccgatcatg gtgtcgagca cttccttgac catctcggga tcgagcgccg aggtcggctc
      181 gtcgaaaagc atgatcttcg ggttcatgca caaggcgcgc gcgatcgcga cccgctgctg
      241 ctgaccgcca gatagttggc ccggatactt gtgggcctgc tcgggaatct ttactcgctc
      301 aagatagtgc agtgcgatct cctcggcctg cttctttggc attttacgca cccaaatcgg
      361 cgccagcgta cagttgtcca acacggtgag gtgcggaaac aaattgaaat gctggaaaac
      421 catgccgacc tctcggcgca cctcgtcgat tttcttcagg tccgcgatca attctacacc
      481 gtcgataacg acacggccca cttgatgttc ttcaagtcgg ttgatgcagc ggatcatggt
      541 cgacttgcct gagccggaag gcccgcaaat tacaatgcgt tctccccccg tgaccttgag
      601 attgatatcg cgcagcacgt gaaaatcgcc gaaccacttg ttcacgccga tcatctcgac
      661 ggcaaccgtc gtgttaagct ttgccggctt gagcagcgat cccgaatttt cggcaacgtt
      721 catgcgtgcc ccctaccgtc gatccgctct ggcgagacga gcctccatcg cgcgcgcata
      781 tcgagacatg ccgtagcaga agatcaggta aaagatagcg gcgacagcat agccggtggt
      841 gctggtgacg ggcgttgccc atttgggatc gatgcgcgcg acctcgatcg tgcgcagcag
      901 atcgaatatg ccgacgatga agacgagcgt tgtatccttg aaaagaccga tataggtgtt
      961 gacgatgttc ggtatggtca ccgtcaacgc ttgcggcaga atgatcagcc gcatcatctg
     1021 ccaatagcgc aggccgaccg ccatggcgcc ctcgtactgg cccttgggaa tggcctgcag
     1081 gcctgcacgc acaacttcag ccatataggc ggacgcaaac attgcgatgc cgaccaaggc
     1141 gcgcaccaat ttgtccggcg agagcgattc cggcacgaaa agcggcagca tcacaccagc
     1201 catgaacagc acggtgatga gcggcacgcc gcgcacgaat tcgatgaaga tcaccgacag
     1261 cgtgcgaacg gccggcatgt gcgagcgacg gccaagcgcc agaagtattc caagcggcag
     1321 agaaaatacg atacccaccg aagcgaccac gatggtcacc agcacaccgc cccacagcac
     1381 cgtgtccacc ggctgcaagc cgattacagc ccagcccgtg agcagaatga acgacgcgac
     1441 cggcaatatg atgaaaaagt agatgatacc gaggtcacgc cgcggtgcat tgagccataa
     1501 cagccacacg ataccgatcg ccaacatcgc gaagaagaga tcgacacgcc agcgctgcgg
     1561 gatcggatag gagccgtaga tgaaataggg caaccgttcc cagacaaatg gccagcaggc
     1621 gccaatttcg cgatgctgca cgctctcaag acaggcatca cgatcgcttc cgctccacac
     1681 cgcgtcgatg accaggaacc cgaccagctc cgggatagcc caggcgagca gcaacgcaat
     1741 aa
//
LOCUS       DATILV010000713         4045 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3490762, whole genome shotgun sequence.
ACCESSION   DATILV010000713 DATILV010000000
VERSION     DATILV010000713.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4045
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3490762"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..163)
                     /locus_tag="VLJ17_16950"
     CDS             complement(<1..163)
                     /locus_tag="VLJ17_16950"
                     /inference="COORDINATES: protein motif:HMM:NF012464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HSV24704.1"
                     /translation="MLIGYARCSTDQQSVTAQVEMLKAASSERIFSENASGIVTDRRG
                     LAKAISALGP"
     gene            1245..1736
                     /locus_tag="VLJ17_16955"
     CDS             1245..1736
                     /locus_tag="VLJ17_16955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24705.1"
                     /translation="MAYTREYVKENAAALALVCACLALPQPAAAQQDFLTFRQQMRPT
                     PPKGRSHLHRRSDAQMGVIADRVDYDYTNQQFAVVGSVQIYYNGATIEADRVVYDQVT
                     KRLRAEGAARLTEANGKVTVGQFIDLTNYYRDGFVDSLGLQTVAPRHAARQPQRRPLL
                     RQP"
     gene            2187..3350
                     /locus_tag="VLJ17_16960"
     CDS             2187..3350
                     /locus_tag="VLJ17_16960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HSV24706.1"
                     /translation="MTVRTVNTLPAATHDERVRCLFAIELSKQSWVIGFNTPLSAKIS
                     RRVLSGGDWKGLFELIEEVRARVSRAMDRAVEVMSCYEAGYDGFWLHRQLEAHGVRNY
                     VIDPASVQVDRRMRRVKTDRIDNERLLRSLMAYLRGEPKVWSVVRVPSVAEEDARRLH
                     RERDRLVSERVQHVNRIKGLCALQGIYDYHPLRPQAMARVEQLRTAQGIALPPRLKSE
                     IKGELQRLELVVEMIATLEAERDAIVEDESSAHLNAKKIQHLHKLKAIGPEFAAVLVG
                     EIFHRDFNNRRQLASYVGFAPSPFQSGNVAHDQGISKAGNRKGRTTGIELAWLWLRYQ
                     PDSDLSVWFRTRVGTVKGRIRRIAIVALARKLLVALWRYLETGLVLRGAVLKG"
BASE COUNT          855 a         1196 c         1220 g          774 t
ORIGIN      
        1 cagggccaag ggcagagata gccttggcca atcccctgcg atcagtgacg atccctgaag
       61 cgttttcgct gaagatgcgt tctgagcttg ctgccttcag catctcgacc tgggcggtga
      121 ctgattgttg atcggtgctg caacgtgcgt atccaatcag cattttgcac ctaagtttcg
      181 ttcaggaatt gcgaaaggat ttcagcggcc attgggctgt gcagatgttt tgattttcga
      241 acaatccacc gttgcggtga tcgcctgata gaacaacgac acatcccgat cgcttagctc
      301 acgcagcgat gctctcgccc ctgtcaccgc gaagcaccag cggccgagcc attcccgctg
      361 ggcttcgatt gccccaagct ttctcatata tttcgaaaat ggcccgcaac cgaatttcgc
      421 acaatgagtc aacttgactc aggaagccgc ttgcgccaat cgctcgccac gtttcacgac
      481 cactctgcct tattatttcg cgaacaacag atgtgttcgc tcgccgcatt tcggaatcac
      541 tctcgaaatc gcttcaggat tatgctcggc acgcccagag atcggctgcg gtcggtcgtg
      601 agatcagtga cttggcgcgg tgcgtaattt tgcgtgacag cctgcattct tgaagggtgt
      661 gagcaaaagt aatgcttgcg gcatatcgcg tgaaaaccgc tcctctgaat cgaacgatct
      721 gatcccgccc tccctctcaa gcaacgaggc ggacgccgtc accatgccat tcgctacgag
      781 cgccgccgat gctgccgcgc tctgcgcgca cttccgtcat tctttttgac aaagtcccat
      841 gcgacatagg cagagacgtg gttcgtgctc cgctagttcc gatcaagcga gaatgtattt
      901 tcaaggctgg cgtccggtag ggtcacgaac ggctgcactg gttgctcgac cagcacgaca
      961 gcaggagcct ggatagctga cgattttgcg cgccgcagca agtcggcagc ccagggccaa
     1021 aagccgatat atgcgcctca ctacaccgtg ccccattgca caggaagacg gcagcgagcc
     1081 tgtttcggcg aagtaatccg gcgagtgatc ctgcgccatt gcgggcctat actcgacctc
     1141 gtgccggcaa gcctaccaaa tccacgggtg ccccttcgca agtggcgcat cacgctgcgt
     1201 tgagccaccc gccgcaggat tgcaaaggta cgaaaggaac tgaaatggcc tatacccgcg
     1261 aatacgtgaa ggaaaacgcc gcggcgcttg cgctcgtctg cgcgtgcctt gccctgccgc
     1321 aacccgcggc ggcgcagcag gacttcctca ccttccgtca gcagatgcgg ccaaccccgc
     1381 cgaaaggccg gtcgcatctg caccggcggt ccgacgcgca gatgggtgtc attgcggaca
     1441 gggtcgacta cgactacacc aatcagcagt tcgccgtggt cggcagcgtc caaatctact
     1501 acaacggcgc caccatcgag gccgaccggg tggtgtacga ccaagtcacc aagcggctgc
     1561 gcgccgaggg cgctgcccgc ctgaccgagg ccaacggcaa ggtcacggtc ggccagttta
     1621 tcgacctcac caactactat cgcgacggtt tcgtcgactc gctggggctc cagacggtcg
     1681 cgcctcgcca cgctgctcgc caaccgcagc ggcgaccgct gctgcgccaa ccctgactgt
     1741 gaaccggcgt cccctccgca gttcagacgg agcgtttcgg ccacatacac ccatcagggt
     1801 gatgcaggag gtaccggccg cggcgatgat gaagccctgc accgcgcaca aaggccggca
     1861 tgttgaacac atcgccgctg gtcgcggccg cagccggtat gcctagacag cggacccgcc
     1921 ccaggtagca ccggccatgc ccgtgacggg gcaacaacgg acaagcgaat gggcgatgag
     1981 atgccaagca cacccgggta ggatcaaggg gtgacagaca tcccactgcg tgtttgcgac
     2041 caataggagc cggaggttct catgatcgaa agagctcggc atgttccgct gcggactgct
     2101 caagtcggca gagatcctat gcaggcgcgg cgggcggggt gataccgttt cggtgtaacc
     2161 tcaccaccaa ggcataggag cgcctaatga cggtccgcac agtgaacaca ctacccgccg
     2221 caacgcatga tgagagagtg cggtgtctat ttgcaatcga attgagcaag cagagctggg
     2281 ttattgggtt caatacgccg ctttccgcga agatcagccg ccgcgtcttg agtggtggcg
     2341 attggaaagg gctatttgag ttgatcgagg aggtgcgggc acgtgttagc cgcgcgatgg
     2401 atcgagcggt tgaagtgatg tcatgctatg aggccggcta tgacggattt tggctgcacc
     2461 ggcaactcga agcgcatggg gtgcgcaatt acgttattga tccggcgagc gtgcaggtag
     2521 accggcggat gcgacgagta aagacggatc ggatcgacaa cgagcggttg ctgcgctcac
     2581 tgatggcgta tcttcgtggc gagccgaaag tttggagcgt ggtgcgggtg cccagcgtcg
     2641 ccgaagagga cgcgcggcgg ctgcaccgtg agcgtgatcg gttggtgtcg gaacgcgttc
     2701 agcacgtcaa ccggatcaag gggctttgcg cgctccaagg catctacgat taccacccgt
     2761 tgcgcccgca ggcgatggcg cgcgttgagc aattgcgcac ggcacaaggc atcgcacttc
     2821 cgccgcggct aaaatctgag atcaagggag aattgcagcg tctggagctc gtggttgaga
     2881 tgatcgccac tcttgaggcg gagcgcgacg cgattgttga ggatgaatca tcggcgcatc
     2941 tcaacgccaa gaaaatccaa catctccata agctcaaggc aatcggcccg gagtttgccg
     3001 cagtgctggt tggcgagata ttccatcgtg acttcaacaa tcgccgccaa ctggcgagtt
     3061 atgtcggctt cgcgccgagc ccgttccaga gcggaaacgt cgcgcatgac caggggatca
     3121 gcaaggccgg caaccgcaag gggcgaacca ccgggattga actcgcctgg ctgtggctgc
     3181 gctatcaacc cgacagcgat ttgagtgtct ggtttcggac acgtgtcggc accgtgaaag
     3241 gtcgcatccg tcgcatcgcc atcgtggcgt tggcgcgcaa gctgctggtg gcgttatggc
     3301 gttatcttga aactggcctg gtgctgcgag gtgccgtcct caaggggtaa cgaatgaaga
     3361 tcaaattccg ataacagaag cttatgagat ccaaggtgga tgtgtgaccg gagcccgaca
     3421 tggctgaaag acgccgcggc agagaatggt cccatccccc ttggagccct tgccctcgca
     3481 acgcgcatga gggaccttgg aacgggttac acccggccgg atataagttg gtgcggcgag
     3541 cgccgcacgt cacgcaaagg gctcgccttg gatcgaaacc atagctcaaa caaatgcagg
     3601 agcgactgag tgagaagata tttgcgatct ccacgatgat gttacggatt taggcgcacc
     3661 ctcaagccct gcgccttcgg cgccccgctt cgcggctgcg gggcttgacc gcgcgcctaa
     3721 atccgtaatc aggagctatc aagatcgcta agcaccaccg aaaatatccc ttgacagcgg
     3781 cctcctcata taagtcgggc cagggcacaa agtcactgcg ctctagcccg ctgcgcggga
     3841 ccggagcaag gggccggtga cctgtccatg gcgaattcct aaatcacgct gcgattggca
     3901 tctggaatag atcgcggcaa tggtgccgcc acgcgtagcg gtcgaggacg gcatggacag
     3961 gggtggaccc tactaacccg cgccaccgat cagcagtcgt cgcgacggaa tgtactcgac
     4021 gtcgatgctg atgccgtcgc cgctt
//
LOCUS       DATILV010000714         3614 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4008625, whole genome shotgun sequence.
ACCESSION   DATILV010000714 DATILV010000000
VERSION     DATILV010000714.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3614
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4008625"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            317..1654
                     /locus_tag="VLJ17_16965"
     CDS             317..1654
                     /locus_tag="VLJ17_16965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008139342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004180 - carboxypeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HSV24707.1"
                     /translation="MIKFLATLLASAGLCASLPLHAHAELDVVGLKSAIKRSVESNYP
                     KLDALYKDIHAHPEIAFQEEKTAAKLAAEMRALGFEVTEHVGKTGLVAIYKNGDGPTI
                     MVRTELDALPMEEKTGLAYASHDKTIWQGRETFVAHSCGHDIHMASWVGTASTLVGLK
                     DQWHGTLMFIAQPAEETVSGAKAMLADGLFTRFPKPNFGFALHNGPFPYGTVLYSVGI
                     RSSNADGLYIKFHGRGGHGAVPQATVDPVMIAARFVVDVQSVVSREKDPTEFGVVSIG
                     AIHGGTAGNIIPDDVVLTGTIRSFKPEVRAKMLAGVERTAKAVAAMSNAPEPEIKIAE
                     GAKAVINDPGVVAAAEKVLKAAFGDKLRSFPPVTASEDYSEFINAGVPSMFFSIGVYE
                     PERFAAAREGKGPELPANHSPLYAPVPKPTIETGVEAMTLAVLSAFDQHAREK"
     gene            1935..2735
                     /locus_tag="VLJ17_16970"
     CDS             1935..2735
                     /locus_tag="VLJ17_16970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1194 domain-containing protein"
                     /protein_id="HSV24708.1"
                     /translation="MRAHTLISILVAGGAVAVAGWGLAAPKPGAVFADKSPSAVPVDV
                     ELVIAVDVSNSMDPEEQALQREGYILGLTSREFLQALRNGSHGRVAITYFEWAGLYDQ
                     KIILPWRLIDGPESADAVTNEIKGTPYRRAPRTSIFGALQFAKPLFDSSGYGGLRRVI
                     DVSGDGSNNMGPPVTIMRDEVLAAGITINGLPIMLSRGYSTGPSIPNLDVYYEDCVIG
                     GPGSFVIAIKEREQFKEATRTKLVQEIASLPTKPRIVPVQARPRVYCS"
     gene            complement(3296..>3614)
                     /locus_tag="VLJ17_16975"
     CDS             complement(3296..>3614)
                     /locus_tag="VLJ17_16975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24709.1"
                     /translation="KRWPCLNAADLFVGLALRRLAAAPLRNAYGFDSALHARRYIELT
                     EEAAISAVEFRRSAESAPVALERRGHMNFVRRVSLEHLIPTATLPGDCESMAVIPSAE
                     LPP"
BASE COUNT          741 a         1056 c         1098 g          719 t
ORIGIN      
        1 ctgtaatgca aatgctggcg cgaaagcagc ccatgcccgc gagctgacct cgcccggatc
       61 gacatccgca atgcagcggc tcccgcagcg ccttgagttc tcgcagcagc cggaacatat
      121 tcacgttcat aggcagtaac aattcgctcg cgggtagcaa gggatgtcgc gttctgccaa
      181 tcgtgcgctc gattccgcta atcgcctatc gcgcctatgg ggccgtggca gatgccacgg
      241 acggtgatgg ggcgcgacct cggcgggcgc ggcgatgccg aaggatatta ctaggtttaa
      301 gttggagtga tttgttatga tcaaatttct ggcaacgtta cttgcatccg ctggcttgtg
      361 tgcttcgctg ccgctacacg cccacgctga acttgatgtg gtcggcctaa agagcgccat
      421 caagaggtcg gtcgagagca actatccaaa actcgacgcg ctttacaagg acatccacgc
      481 ccaccccgaa atcgcttttc aggaggagaa gacggcagcc aagttggctg ccgaaatgcg
      541 ggccctgggc ttcgaggtga cggagcacgt cggcaagacc gggctggttg cgatctacaa
      601 aaatggcgac ggccccacca ttatggtgcg caccgaactc gatgcgctgc cgatggaaga
      661 gaagaccggc cttgcttacg cgagccatga caagaccatc tggcaagggc gtgaaacctt
      721 cgtggcccac agttgcggcc acgacattca catggccagc tgggtgggaa cggcctcgac
      781 gctggttggc ctgaaagacc agtggcacgg cacgctgatg ttcatcgccc agccggccga
      841 agaaactgtg tcaggcgcca aggccatgct ggcggacggc ctgttcacgc gatttccgaa
      901 gcccaatttc ggctttgctt tgcacaatgg ccccttcccc tatggcaccg tgctgtattc
      961 cgtcggcatc cgctcctcga acgccgacgg cctctacatc aaattccacg gccgcggggg
     1021 tcacggcgcg gtgccgcagg caaccgtcga ccccgtgatg atagccgcgc gttttgtcgt
     1081 cgatgttcag agtgttgtca gccgcgaaaa ggatccgacc gaatttggcg ttgtcagcat
     1141 cggtgcgatc cacggcggca cagcgggaaa catcattccc gacgatgtgg tgctgacagg
     1201 caccatccgc agcttcaagc cggaggtgcg cgccaagatg ctcgcaggcg tcgagcggac
     1261 cgcgaaggcg gtcgccgcca tgtcgaatgc gcctgagccg gagatcaaga tcgccgaggg
     1321 tgccaaggcc gtgatcaatg atcccggcgt ggtcgccgcg gcagaaaaag tgttgaaagc
     1381 ggcgttcggc gacaagttga ggtcatttcc gcccgtcacg gccagcgaag attattcgga
     1441 gttcatcaac gctggcgtgc cctcgatgtt cttcagtatc ggcgtttacg aaccggagcg
     1501 cttcgccgct gcccgcgagg ggaaaggtcc agagctgccg gccaaccact cccccttgta
     1561 cgcgccggtg ccgaaaccga ccatcgagac cggggttgag gccatgacgc tcgcggtgct
     1621 gagcgccttc gaccagcacg cgcgggaaaa ataaccgcct gcggtgcgtc gccagcaatg
     1681 cctttccgca agatcgattg tcggcggaat tcatcgccgc agattcaaat aaactcgctc
     1741 tgcactgcac cgggcgagta tcaagatgtc gtcagcgcgc atccgccgtg cgcgccggct
     1801 ccatcaggct ttttgtgagg cattccgcaa tttgccgccc cgtatcaatc ggacatcggc
     1861 cgcgatcttc agcttgcgca agccccctgc acacgccacc atgtagccaa tgagatcggc
     1921 cggaggaggg acgcatgcgt gctcacacct tgatttcgat cttggtagcc ggcggggccg
     1981 ttgcggttgc gggttgggga ttggcggcgc ccaagcccgg tgcggtattt gcagacaaga
     2041 gccccagcgc cgtaccggtc gatgtcgagc tcgtgatcgc ggtcgacgtg tccaattcaa
     2101 tggatccgga agagcaggcg ttgcagcggg aaggttacat cctggggctg acttcgcgcg
     2161 agtttctcca ggcgctgcgt aacggcagtc acggccgcgt cgccatcacg tatttcgaat
     2221 gggccggcct gtatgaccag aaaatcattc tgccgtggcg gctgatcgat ggcccggaat
     2281 ccgctgatgc ggttacgaat gaaatcaagg gtacccccta tcggcgcgcg ccgcgcacgt
     2341 cgatcttcgg ggctctgcaa tttgccaagc cgctgttcga ctcgagcggc tatggcggcc
     2401 tgcgtcgcgt catcgatgtc tccggtgacg gctctaataa tatggggccg ccggtcacaa
     2461 tcatgcgcga tgaggtgctg gcggcgggca tcaccatcaa tgggctgcca atcatgttga
     2521 gccggggcta cagcactggt cccagcattc cgaacctgga tgtctactac gaagactgcg
     2581 tgatcggcgg gcccggatct ttcgtcatcg cgatcaagga gcgcgaacag ttcaaggagg
     2641 cgacccgcac caagctggtg caggagatcg cctccctgcc gaccaagccg cggatcgtgc
     2701 cggtgcaggc aaggccgcgg gtgtattgtt cttgaggtta ggcagatttc gtaagatggg
     2761 cgagtcaagt ttttgtcgcg aaatgcgtgg attctagcga gcatggtaga tttgcacgca
     2821 gagttttcgg cataaatccg gcaaccggat tattccggca actgatgtgc aacagctata
     2881 tttcctgagt gttcacgcga tcattggtgc gtgcttggcg gaataatcgc aggggatccg
     2941 gaaggcccag agacaatctt taggcggtag cgagaggacc ttacaaaatg gctgatgccg
     3001 tgacctgaag cggattcttt gcgaggcgat cgactattga cggggatttc cccccagctt
     3061 tgcggagaca gacgatgacg ataattcgcc agggccacat gcagatcaaa gaacaggcat
     3121 tggctaagac tacggccacg cggtctcgcg tctctcgcta tcagcccacc gatcgtgttt
     3181 ttggccttcc tgaagacgct ctgattattc cgccaaacat gtacccgtga ccccgcgatt
     3241 cacctggaaa cacgcccttt gtcggtcagt tgccgaaata atcctgttgc cggaattatg
     3301 gcggtaattc cgctgacgga attaccgcca ttgattcgca atcgccaggt agagttgcgg
     3361 ttggtatgag gtgctcaagg gaaaccctgc ggacgaagtt catgtggccc cgtcgctcaa
     3421 gcgccaccgg cgcgctttcc gccgagcgcc ggaactctac ggcgctgatc gcagcttctt
     3481 cagtgagctc aatataacgg cgtgcgtgca aggcgctatc aaaaccatat gcattccgca
     3541 gcggggcggc agcaagacgc cgcaacgcca agcctacgaa aagatcggcg gcgttcaaac
     3601 aaggccaacg cttt
//
LOCUS       DATILV010000715         2276 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3241959, whole genome shotgun sequence.
ACCESSION   DATILV010000715 DATILV010000000
VERSION     DATILV010000715.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2276)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2276)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2276
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3241959"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..592
                     /locus_tag="VLJ17_16980"
     CDS             <1..592
                     /locus_tag="VLJ17_16980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24710.1"
                     /translation="IAFALAVSVASGPAAAQSWREYSYPAYAFTVAFPADPQIETTIY
                     QVADGRSVEAHVYSVRQNNGVFKVTVAELANTGLEESAVIDHAIKTMSAGGEVKINIP
                     HRIYQVYGRQLSIVGADGSRSTAAVFDYKGRLYQIEGKALPGGDPIDIIRFQQSLVFT
                     DGGSNRSPDAIRAIREACRASVVNPAGADDPRCAQQ"
     gene            1306..>2276
                     /locus_tag="VLJ17_16985"
     CDS             1306..>2276
                     /locus_tag="VLJ17_16985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24711.1"
                     /translation="MLHPEFKFDGLYLAMLVGAVLFALSALTFEMARRRISLLDRWLS
                     RPLLPTLVLWRLLAMVFGATLVINSMAHVFVAPNLAANGSMVLKTMLFLQILIGGMFF
                     TQSRLTWACAAVLLLPLLCAWEFSTVHAIDYAFELVGIGLAVMLMAPALAAPDFDTQK
                     QVATCIPTAFSVCVRTGRQSYGVAWSQANPWRYDPRDGMPGEDREALAIAVLRTLFGL
                     QLIVLSAHDKLLEPGVSLAFVDKYSFVNVPALLGASGFTNLHFVFGSGLAEIAFGTLL
                     LANVAVRATCAILLFMFTTTGVVFGIEEMVGHLPIIAMLILLMASGSR"
BASE COUNT          435 a          672 c          647 g          522 t
ORIGIN      
        1 gatcgccttc gccctcgcgg tatccgtcgc cagcggcccc gcagctgcgc agagctggcg
       61 ggaatacagc tatccggcct acgcctttac ggtcgcgttt ccggccgatc cgcagatcga
      121 aaccacgatc taccaggttg ccgacggccg ttcggtcgag gcgcacgtct actcggtccg
      181 ccaaaacaac ggtgtgttta aggtgacggt ggccgaactc gccaataccg gcctggagga
      241 aagtgccgtc atcgaccacg ccatcaagac aatgtccgca ggcggcgagg tgaaaatcaa
      301 cattccccac cgcatctacc aggtctatgg tcgtcagctc agcatcgtgg gagcggacgg
      361 cagccgctcg acagccgcgg tgttcgatta caaagggcgg ctctaccaga tcgagggcaa
      421 agcgctgccg ggcggggacc ccatcgacat catccgcttc cagcaatcgc tggtcttcac
      481 cgacggcggc tccaaccgct ccccggatgc tatccgtgcc attcgcgagg cttgtcgcgc
      541 aagcgtcgtt aaccccgcag gcgcggacga cccgcgttgc gcgcagcaat gaaattgtca
      601 cacttgtgcg cgaggccgaa gcgcagatcc tcgttccgtt cggaccttgt tggtaggata
      661 acctctccgg cgtgaattcg actcggcgta ccggtattcg tgagggcgat atccccggga
      721 aagttcgtgt cgtgacgcca accgccgcga tcaagcccgg cgtcatagcg gatcttaatc
      781 gactacagat agctcatttg cacgtgggat attagcctgc ggagcgaagt gcactttgat
      841 ctttgtcaaa gtcaaaacgt cggctggcgc taattcgaaa aatgcgacca aggtcgtagt
      901 cgcgcggcca acagggctgc gacgaaagaa agctccagtt caaaagatca cgtacctcgg
      961 cacgattgtt tgcacaaact acgtgtggtc gaaatcttac gacatcaaac ttcgcaagta
     1021 ccacaccaaa cctgacaatt agccaacaag gaggttgtcg tgagtacgaa ttggaagcca
     1081 gagcgaagaa tcccgcattg cgaactcgag tgtgatcacc gtcagcaagc ccgatccgtg
     1141 agcttacctc caaggtggtc tgctcttttt tggggagttc ttccgagagt ttctggtcga
     1201 accgatatat tgcttccact cgttgcgcta aatttattcg cattatgtct cgcctccacg
     1261 gatgcactcg cacacgcccg gtggttcatt gatgatactc agatcgtgct gcatccggag
     1321 ttcaagttcg acggtcttta tctggcaatg ctggtcggcg ccgtcctgtt cgcgttgtcg
     1381 gccctgacgt tcgagatggc aagaaggcgc atctcactcc ttgaccgctg gctcagccgt
     1441 ccattgttac cgacactcgt gctgtggcga ctcctggcga tggtgttcgg cgcgaccctg
     1501 gtcatcaaca gcatggcgca tgtatttgtg gcgcccaacc tcgcggccaa cggtagcatg
     1561 gttttgaaga ccatgctgtt tcttcagatc ctgatcggtg gcatgttttt tacacagtcg
     1621 cgactgactt gggcgtgcgc agcggtgctg ttgctgccgc tcttgtgcgc gtgggaattt
     1681 tctaccgtcc atgcgatcga ctatgctttc gaactggtgg gcatcgggct ggccgtcatg
     1741 ctgatggcgc ccgcattggc ggcgcctgat tttgacaccc agaagcaggt tgccacctgc
     1801 atcccgaccg cattttcggt ctgcgtgcgc acggggcggc aatcctatgg cgtggcttgg
     1861 tctcaggcaa atccatggcg ctatgacccg cgcgacggca tgcccggcga agaccgtgag
     1921 gccctggcca ttgccgtcct gcgcactttg ttcggtctac aattgatcgt gctgtccgct
     1981 cacgacaagc tgctggagcc aggcgtatcg ctggcgttcg tcgataaata tagcttcgtc
     2041 aacgtgccgg ccctgctcgg tgccagcgga ttcaccaacc tgcatttcgt gttcggctct
     2101 ggtcttgcgg aaatcgcatt cggtacgctg ctgctcgcta atgttgcggt cagagccacc
     2161 tgcgccatcc ttctttttat gttcacgacg accggcgtcg tgttcggcat cgaggaaatg
     2221 gtcggtcatc tgcctatcat tgcaatgttg atcctgttga tggcgtctgg ctcgcg
//
LOCUS       DATILV010000716         2796 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2729480, whole genome shotgun sequence.
ACCESSION   DATILV010000716 DATILV010000000
VERSION     DATILV010000716.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2796)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2796)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2796
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2729480"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(114..1154)
                     /locus_tag="VLJ17_16990"
     CDS             complement(114..1154)
                     /locus_tag="VLJ17_16990"
                     /inference="COORDINATES: protein motif:HMM:NF024874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSV24712.1"
                     /translation="MSTPYANIVIAICFTATSILLEGCTTATSQATDHFDGQRFHNRE
                     RSPDPTFWEEVQIAWTLRTKTRNWPDHFQTAPAQLSKDPVLRGIRVLWVGHATALIQT
                     PTVNIITDPVLFDSIGPTIFPTKTVTNPGVAVGGLPRIDVILISHNHYDHLDLKSIHA
                     IVNRQKGSAPTVLVGLGVGNLLKKEGISSFSELDWDQSVTVKDTRFVFLEAIHTSRRG
                     MWDTNKTLWGSFLIDSPEGRIYFAGDTAYGKHLKHVYERYGAPKLSLLPIGAYEPRWF
                     MYRMHMNPDEAVRAHIELHSEHSIAIHFGLIDNAAESYTAPVDDLAIARNAHGIAEVD
                     FVAPHIAQIFQY"
     gene            complement(1174..>2796)
                     /locus_tag="VLJ17_16995"
     CDS             complement(1174..>2796)
                     /locus_tag="VLJ17_16995"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSV24713.1"
                     /translation="VTLKQPSQFTLIGRQKATPRVDSTSKCNGTALYTIDVKLPGLLT
                     AVVAFPPSFGARLISFDAAEALRVPGVTDVVQVPEGIAVVGKGMWAALKGRSALKVQW
                     DESAGASMNSDTVLAQYRSQARNPGTPFVRPADGQRTPDTAVQTIEATYEFPFLAHAT
                     MEPMNCVVWLHDGILETWSAHQFTTLDHTFAAKAANLPMDKVRLHTLVSGGSFGRRAN
                     FVSDSTVAAVNIAVAIKGRAPVRLQFSREDDTGAGMYRPMYVHAVKAGLDATGKLAGW
                     QHSIVGQSIFAGTVLGSFVIKDGIDAMSVEGVFPSQYAIPQMMGDLHSTELPIPPLWW
                     RSVGNSHSAFVMETMIDELAAAAGEDAVAFRLALLGNNRRVAGVLKLAAGKAGWGKPR
                     EPGIEQGIAVHQCFGTSVAQVADVSMKDGKVRVHRVVCAVDCGVAVNPDVIRAQMEGG
                     IGFAMSALYYGEIGIEAGRAVQRNFDRYRVLRIYEMPKVEVHIVSSNAAPTGVGEPGV
                     PPLAPAVANAMARLGVPRVRRLPLARAGLVAL"
BASE COUNT          577 a          844 c          804 g          571 t
ORIGIN      
        1 cgcagggcgt atccgccgac catgccggtg gcgcccacga tggcaagacg tgtccgaccc
       61 gccgtcggaa cgttcattca ggtcccaagg cgttggtcac ggcgctgatg cctctaatac
      121 tgaaagatct gtgcgatgtg cggcgcgaca aagtctactt ccgcaatccc atgagcgtta
      181 cgggcgatgg caaggtcgtc gacaggagct gtatagctct ctgccgcgtt gtcaatcaag
      241 ccgaaatgaa tagcaataga gtgttcactg tgtagctcaa tgtgcgcgcg cacagcctca
      301 tcgggattca tgtgcatgcg atacatgaac caccgaggct cgtaagcgcc tatcggtaac
      361 agactcagtt taggtgcacc ataccgctca tatacgtgtt tgaggtgttt gccgtatgcg
      421 gtgtccccgg caaagtagat tcttccctca ggagaatcga tgagaaacga cccccataac
      481 gttttgttcg tgtcccacat gccccgccgg gatgtgtgaa tggcctcaag aaagacgaac
      541 cgcgtgtcct tcaccgtgac agattgatcc cagtccaatt ccgagaacga cgaaatgcct
      601 tccttcttca gcagattacc gactccaagg ccgaccaaca cggttggcgc gctgcctttt
      661 tgtcgattaa cgatcgcgtg tatggacttc agatccaaat gatcgtagtg gttgtgactg
      721 attaggataa cgtcaatcct tggaagcccg ccgacggcca ctccagggtt agttacggtc
      781 ttggtaggga atatcgtggg accgatagaa tcgaacaaga ccgggtccgt gatgatattc
      841 accgttggcg tttggatgag agccgtagcg tggccgaccc aaagaaccct gatcccacgg
      901 agcacgggat ccttggacag ctgagcgggt gccgtctgga aatgatcagg ccaattcctg
      961 gttttggttc ttagcgtcca ggcaatctgt acctcttccc agaaagtagg atcgggagag
     1021 cgttcgcgat tgtgaaagcg ctggccgtcg aaatgatccg tcgcttgcga cgtggctgtc
     1081 gtgcatccct ctaggagtat agaagttgcc gtgaaacaga ttgcgatcac aatgttcgca
     1141 tacggtgtgc tcatgtgctc acgctgggtc tcgtcacagc gccactagcc ccgcccgtgc
     1201 cagcggcagc cgccgcaccc ttggaacccc taaccgcgcc atggcattgg cgaccgcggg
     1261 agcaagcggg ggcacgccag gctcgccaac ccctgtgggc gcagcattgc tgctcacgat
     1321 gtgcacttct accttcggca tctcgtagat gcgcaacacg cggtagcggt cgaaattgcg
     1381 ctgaacggcg cggcccgcct cgatcccaat ctcgccgtaa taaagcgcac tcatagcaaa
     1441 gccgatgccg ccttccatct gcgctcggat cacatcggga ttgacggcga caccgcagtc
     1501 aaccgcgcag acgacgcgat gcaccctgac cttcccatcc ttcatcgata cgtccgcgac
     1561 ctgagcgacg gaggtaccga aacattggtg tacggcgatg ccttgctcga taccaggctc
     1621 tcttggcttg ccccaaccag ccttcccggc ggcaagcttc aacacgccgg cgacccgcct
     1681 gttattgccg agtaatgcaa ggcgaaaagc gacggcgtcc tcgccagcag cggcggccaa
     1741 ctcgtcgatc atggtttcca tgacgaacgc cgagtgacta ttgccgacag agcgccacca
     1801 cagcggcggg atgggcagct ccgtcgaatg gaggtctccc atcatctgcg gaatcgcgta
     1861 ctgcgatgga aagacgccct cgaccgacat tgcatcgatg ccgtccttga tcacgaacga
     1921 gcccagcacc gtgccggcga agattgattg ccctacgatc gagtgttgcc atccagccag
     1981 cttgcctgtc gcatcgagcc ccgctttcac agcatgcacg tacatcggcc ggtacatgcc
     2041 cgcgccggtg tcgtcctccc ggctaaactg cagacgcacc ggtgcccggc ccttgattgc
     2101 gaccgcgatg ttgactgcgg caacagtgga gtcagagaca aaattagccc gtcgcccgaa
     2161 gctgccgccc gagacaagcg tgtgcaaccg gactttgtcc atgggcagat tggcggcctt
     2221 ggctgcgaaa gtgtgatcaa gggtcgtgaa ctgatgagcg ctccaggtct ccaggatgcc
     2281 gtcgtgcagc cacaccacac agttcatcgg ttccatcgtg gcgtgcgcga gaaacgggaa
     2341 ttcgtaagtt gcctctatcg tctgaactgc cgtgtcggga gtccgctggc cgtctgccgg
     2401 ccgcacgaat ggtgtgcccg gattccgcgc ttgagaccgg tactgcgcta gcacggtgtc
     2461 ggagttcatc gatgcgccgg ctgattcgtc ccattggact ttaagagcgc tcctgccctt
     2521 cagcgcagcc cacattcctt tgccgacgac ggcaatacct tcgggcacct gcaccacgtc
     2581 cgttactccc ggcacgcgca acgcttcggc ggcatcgaac gaaatgagtc gtgcgccgaa
     2641 ggacggggga aaagcgacca cggcggttag taggcccggg agcttaacgt caatcgtata
     2701 gagcgcggtg ccgttgcatt ttgacgtcga atcgacgcgc ggtgtcgcct tctgcctgcc
     2761 gatcagggtg aactgagatg gctgcttcag cgtcac
//
LOCUS       DATILV010000717         8165 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_942753, whole genome shotgun sequence.
ACCESSION   DATILV010000717 DATILV010000000
VERSION     DATILV010000717.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8165
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_942753"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            342..689
                     /locus_tag="VLJ17_17000"
     CDS             342..689
                     /locus_tag="VLJ17_17000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HdeA/HdeB family chaperone"
                     /protein_id="HSV24714.1"
                     /translation="MRSMVVLAGAFLAITVSQAQAQVELKSYVDAEGFIDIQKLTCAQ
                     LADTFQEDADMLTTWYSGWYNGLAKKHFLHLTRGKELEHEVIVYCKANRDKKIIQAID
                     VMLKSEKANAAFK"
     gene            complement(1023..1406)
                     /locus_tag="VLJ17_17005"
     CDS             complement(1023..1406)
                     /locus_tag="VLJ17_17005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24715.1"
                     /translation="MSFALRCVLLCSLLASLLWAPAQAADYEVGTSLVCDTQAQVKRF
                     VALFTGDAQAAIQVVNAEEQNPSACVIRNVAYMRGIRVDLARHGDDAFEIVRILVVGI
                     KADGGVLPVQPSVYFSLFGVKEYAI"
     gene            complement(2136..2306)
                     /locus_tag="VLJ17_17010"
     CDS             complement(2136..2306)
                     /locus_tag="VLJ17_17010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24716.1"
                     /translation="MKHGKTQHPEHGTPRDHAASRRQEWLEQIVGRRYGRRRLRRIAG
                     SAAAIRLVTKKH"
     gene            3420..3608
                     /locus_tag="VLJ17_17015"
     CDS             3420..3608
                     /locus_tag="VLJ17_17015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24717.1"
                     /translation="MTTSAKFRVRVVFAGACEHIEVVAYGRSCNEGIVHIWDNFPDQL
                     TPSGAIYETILEVDKAQK"
     gene            3605..4294
                     /locus_tag="VLJ17_17020"
     CDS             3605..4294
                     /locus_tag="VLJ17_17020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HSV24718.1"
                     /translation="MSSLQQASATVNSPEQLRRRVLNAGSGPLSARQLHPVFRENQWR
                     QIRLDIDPQTNPDVVGSITNMTGLLPSEKFDAIWSSHSLEHLYAHEVPLALSEFRRIL
                     RPDGFALITSPDLEAIARVLLEQGLNHVAYTSPMGPITPHDMIFGHSGSIARGKSYMA
                     HNTGFTCAVLGQLLLDAGFPVVLAKSERFDLWALAFMEKADKAAIQGELKIAGLDMFD
                     DAERAASALCR"
     gene            complement(4327..6375)
                     /locus_tag="VLJ17_17025"
     CDS             complement(4327..6375)
                     /locus_tag="VLJ17_17025"
                     /inference="COORDINATES: protein motif:HMM:NF019843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV24719.1"
                     /translation="MDRSSLGLLERLQLLSDQDDDAHWLERGIDDHKKGRHLRALEAW
                     KRASALGCAEAEYRIGLLYMRGESVLRSVPDAVAWFRRAGDVGHADAQFQLGRIYFGG
                     SNTGPSGTDDWIRTTSEHDGESSLKARKALFPNGLTVEKDLNEAMRWISAAASAAHAE
                     AQAILGDMYRRGLGCEQDYARAYQWYSLAAANSVASAQFGMGDIYYQGLGVEVDHQLA
                     ADWYDKAARNGDARAQVALASMYLAGEGRPANPNEAARLFIQAAERGEPRGLYRAALI
                     LLSGDGLPANLGKAETYLRKAAAADYLPAIIRLAEFYSHGNGVEPDLREAANWHRRAA
                     ELGDAQSQFLIGRFYATGTGVPLNLRESARWFLRAAHQGHSIAAHNVAAYYANGTVGD
                     RDLARAVKWYEKAATEGIVASQVQLGKLYSVGEGIVRDIDLAATWLGKAAQTGNPEAK
                     TALAVLQLQGEGSARDAGRAEELLKQAAEGGYAAAAMQLGHLYSGKYAVEANRRDALH
                     WYTKAAEAGNAEAQHILGTLYLNGRGVPKNLELAAMWIEKAAQNDYASSQFQLAVMYC
                     TGQGVPQNLARAVTWYQTAAQRGHALAQYNLAVMLAKGQGCDPDQAKALYWFQQAAEQ
                     DVKQARDAVQNMSRNAQGHPPEGHAVGHSKQSTSPPASNLEDSSERWLSALRSELNAK
                     "
     gene            complement(6383..7786)
                     /locus_tag="VLJ17_17030"
     CDS             complement(6383..7786)
                     /locus_tag="VLJ17_17030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012030481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030253 - protein secretion by the type I
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HSV24720.1"
                     /translation="MFLERLLNAAKRQLLAKAEAIRNAAATDIIRQFQSETDAIREAP
                     EPRWARVTVLTLAALLLSMTLVMTLTRLDRVVTSVGGKIVAAQPINVFQALDPSIIRS
                     LDVREGDEVRQGQLLATLDPTFAAADVKQLTQQIASLEAQIARDEAQLNGRPLVIPQQ
                     SDPELMKYAVVQKGFYDQQVAQYKAQLASFDAKIAQTRTTIQKFQTDQSRYRDREDIA
                     RKIEDMRLTLAQHGTGSQYNLWTSQDQRLELLRTIEFGYNSLVEAQHTLASLTADREA
                     YIQQWSTQLSQDLVTARNNLDAARAQLDKATKHQDLVSLTATESSVVLTLAKLSVGSV
                     LKQGDTLFTLMPTDTAVEAEVRISSKEIGFLRPGDHCVLKIDAFNHMEHGTAEGVVRW
                     ISDNAFTIDEDGKPVEPHYRARCSVDAMMFRNVPSKFRLIPGMTLEADVKVGTRSVAM
                     YLLSGILRGFSESMREP"
     gene            complement(7776..>8165)
                     /locus_tag="VLJ17_17035"
     CDS             complement(7776..>8165)
                     /locus_tag="VLJ17_17035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018319095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSV24721.1"
                     /translation="IYEGSPNLSGGQRQRLAIARALIVDPRILILDEATSALDADSEA
                     IVNANIARIARGRTMIIISHRLSSLVSADAILVLERGRVHDIGRHSELLERCEIYSNL
                     WHQQTQHVTVPSSRGDKLAFRGPIRVS"
BASE COUNT         1648 a         2372 c         2374 g         1771 t
ORIGIN      
        1 cggcgacgga aaacaccatt tctgacggtg accgtacacg ggcccttccg gccgccagcc
       61 gggcgacatt cgcctcccgt cgctcggggt caactcgcga ggagcatcgc acggattgac
      121 ggaccgccac gccgctaacg acctctccat ctcgcaccag cgccgtgttc gatgtaatac
      181 acggtgttcg aagaggcaaa gagtccgatt gatttttgtc aatgcaaggg atcgcgtttt
      241 cagataactg aaaacaccta tttcgcatat agcggacggg cagcttgcca tccagcggga
      301 cagacctcaa aagggcaagc cgaactgaag gggagggaag aatgcgttca atggtggttc
      361 ttgcgggagc gttccttgcg atcacagtct cgcaggctca agcgcaggtc gaactgaagt
      421 cctatgtcga tgccgaaggc ttcatcgaca tccaaaaact aacctgcgct cagcttgcag
      481 atacgttcca ggaagacgcc gatatgctta ccacctggta cagcggctgg tataacggct
      541 tggccaagaa acatttcctt catctcaccc gtggcaaaga gttagagcac gaggtgatcg
      601 tgtattgcaa agccaaccgt gacaaaaaaa tcatccaggc gatcgacgtc atgttgaagt
      661 ccgagaaggc caatgctgcc ttcaagtaag ccgagtggct tcggactaag agaaatcttt
      721 acagtaagtg tttagagggt aaccggcgcg agccgcgaac ggtcgcaagc taaggattcg
      781 tccggaagca agtgatcata cgctgtcatg ccgaccgctc atcgagcgtc gccgcctgct
      841 gctctctgag acggcggcga acccgcagtc gcaacctccg caatagacgc aagttgcgcc
      901 agcgggtcat cggacaaccg tgttggaaga tgtagcgacc cgagaggtag accggtgtgc
      961 ccatcgttgg gcaagcgggc cagtactcac tgggccccag caaatcctag attgccagtc
     1021 gctcagatcg cgtattcttt gacaccgaac agcgagaaat atacggacgg ttggacaggg
     1081 aggacgccgc cgtcggcctt gataccgacg accaggatgc gcacgatctc gaatgcgtca
     1141 tcgccatgcc gggccaggtc gacccggatt ccgcgcatgt aggcaacgtt cctgatgacg
     1201 caggcgctcg gattttgttc ctccgcattg acgacctgga tagcggcttg cgcatcacca
     1261 gtgaacagag caacgaaacg tttcacctgt gcttgggtgt cacagacgag gcttgtcccg
     1321 acctcataat ctgcagcctg cgcgggcgcc cagagcagcg aggccaacag tgagcacaat
     1381 aatacgcaac gtagtgcgaa gctcattaga gcctcccgtc gtgaacgttt taaattcctt
     1441 gccatggttc tggggcgagc cctcgtgtcg gtcaccagag ataagtccat cgggcaactt
     1501 ctggttccct ccttcgtttc acagcttcag gagtgattcg tgagccgcta tcacaggttt
     1561 gcgagtgggc ggttacttaa cgatcgcgaa cgcggggcga acgaaccccg gctgttgcgg
     1621 gccgccgtca atggctggtt cagttcgtgc gctactgcgg ttgcaagctc tccgacgctg
     1681 ccgaatcgca aaagtcgcgc gagcgattcc tgatgtaggc gtaatgcggc gcagcgcagg
     1741 ttgagcgcgc cgccgaggtg gtgagacgcc tacgatccgg tgcccacgcc gatcagagcg
     1801 gcgataaact tcgaatgtcg atcagccgtg cgggtctggc cgatgcgctg cacgtcggcg
     1861 gctggggcga ggaggccaag cgcctgttcg ccgcatctat caatgcgccg tggcgctgga
     1921 gcgcgcgcgg cactcttttg cacgtgtcgc ggcgttcgcg ccgctcaatg ggtcatcgag
     1981 agcacgaagc tcagcgagtt aatgtggacg gacctcgcgc cggcgcgcgc gagctgatcg
     2041 aacggtgcgg ctaccaccgg cgcggagcct cccgagctgg aagctgtgct ccagggcgag
     2101 cgccagttca tccaccggct gcgagagatt gtgcctcagt gctttttcgt gaccagccgg
     2161 atagcggcgg cagaaccagc aatccggcgc aggcggcggc ggccatagcg acggccgacg
     2221 atttgctcta accattcctg tcgacgggac gccgcgtgat cgcgtggagt gccgtgttca
     2281 ggatgctgcg tcttgccgtg cttcatgatg acaactccat gatgccgtta acgccgacat
     2341 gcaaaacatg aactgattcg tttaaataaa ccaatatccg attttagata ttttgattta
     2401 aaagcgcctg tgtgcgtttt cagtttgtta agctttgttc gaggtgaagt tcgccgacca
     2461 ccactcaacg gttcccgcgt ctactgtttt gtcggatcaa acctgacaag atagtcgctg
     2521 ccggcaggcg ccaactgacg tgcgagcgcc gatggtcgac ttcgtgggag aagaacagcc
     2581 cgccccatcc ttgcgtgata ggctccctca ggctgtccca gatcggtgac ggcgcgtagc
     2641 ttcaagcggc attttgcgca tgggctccca accattcgca tcctcaccgc tcgaaattgc
     2701 tgcaactcat tcgacgctaa taggttttca gcccacggcc gcagtcccgc ttcatccaaa
     2761 ggggtgcgga cgtcttctaa gtcgttctag aaagcccagt tgattgctat cgtccagacg
     2821 ttcgccgatt ggtcgcggtt tcggctcgat aagccatcgt attcgcctaa gctatcgtcg
     2881 atcatgctat cactgcgctg tacgtacgct caaagccgta gctcgcaaca cgaacggcat
     2941 cgagacgccg gccgtgaact acgttcgcag gttgcttgat atatgcttca ttatgtccct
     3001 tcaaaacttg ccgaatattg gcctcactac ggccagtgtg atgggcgaaa tcgaaatctc
     3061 actggcgcca ccgctgcaac cagcagacgc gccaacatcc aaaaccggag agtcgatcga
     3121 gatcggctca cgacggcgat ccagatggct cggggcagag atcagcgacc atgtcggcgc
     3181 gcgagtttga ccggaaactc gcacgctaaa acgatttcaa tcgacttggg cttcaatggc
     3241 attgtatgcg aggtcagcat cccgaagagt ggaggggggc gacagctata accgcgctgt
     3301 gggtgcagcc aagtgtctgc gtgaccgcca ccgtccaccc gcatttcaca caccagatcg
     3361 tgctttggaa cgtatttacg gtcgaacgag atatcaccac gccttgatat tgttgccgga
     3421 tgaccacttc cgccaaattc cgtgttcgtg ttgtgttcgc gggtgcctgt gaacacattg
     3481 aagttgttgc ttatggcaga tcatgcaatg aaggcattgt gcatatttgg gataatttcc
     3541 ctgatcaatt gacgccatcg ggggcaattt acgagacgat tctggaggtt gataaggcgc
     3601 agaaatgagt tcccttcaac aggcatcggc aactgtcaat tcgccggaac aactccgcag
     3661 gcgcgtgctc aatgcggggt ccggaccgct ttctgcgcgc caattgcatc ccgttttccg
     3721 ggagaaccag tggcgacaaa ttcggcttga catcgatcct caaacaaatc ccgatgtggt
     3781 gggatcgatt acgaacatga ccgggcttct tccatcggaa aaattcgatg caatctggtc
     3841 atctcacagc ctggaacatc tctacgccca cgaggttccg ctggcgctgt cggaattcag
     3901 gcgtattctc cggcccgatg gatttgcgtt gattacgtcg ccggatctgg aagcgatcgc
     3961 gagagtactt ttggagcagg ggctcaatca cgtcgcgtat acatcgccga tgggacccat
     4021 taccccacat gatatgatct ttggacactc tggttcaatc gcccgcggca agtcgtatat
     4081 ggcgcacaat actggattta catgtgccgt actgggccag ttactgctgg atgctggctt
     4141 tcctgtcgtg ctagccaaga gcgagcggtt cgatctgtgg gcgcttgcgt tcatggaaaa
     4201 agctgacaaa gctgcgatcc aaggcgagtt gaagatcgcg ggcctcgaca tgttcgacga
     4261 cgcggaacgc gcggctagcg cgctatgtcg atgagcgttt gaactcaacg ccgaccttct
     4321 ttgaattcat ttagcattta gctcgctccg caatgcggat agccaacgct ctgaactatc
     4381 ttccaggtta cttgccggag gactggtcga ttgctttgaa tgtccaacgg cgtggccttc
     4441 cggcggatgc ccttgggcat tgcgactcat attctgaacg gcgtcgcgcg cctgtttcac
     4501 atcctgctct gctgcttgtt gaaaccaata aagcgctttg gcctgatccg gatcgcatcc
     4561 ttggcctttg gccagcatga cggcgagatt gtactgggca agtgcatgac cgcgctgagc
     4621 ggccgtctgg taccaagtta cggcccgcgc aagattttgc ggtacgccct gcccggtgca
     4681 atacatcacg gcgagctgga actgcgaact tgcgtaatca ttttgcgcgg ccttctcgat
     4741 ccacatcgcg gcgagttcca agtttttcgg gacgccgcgg ccattgagat acaacgttcc
     4801 gaggatatgc tgggcctcgg catttccggc ttccgcggcc ttcgtgtacc aatgtagcgc
     4861 atccctcctg ttggcctcga ccgcatattt tcccgaatag agatgtccga gctgcattgc
     4921 cgctgcggcg taaccgcctt cggcggcttg cttcagcaat tcctctgccc gcccggcatc
     4981 acgggcggat ccttcgcctt gcagctgcag gacggcaagt gccgtctttg cttcgggatt
     5041 cccggtctgg gccgcctttc cgagccatgt cgccgccagg tcgatgtctc tcacaatgcc
     5101 ttcgccgacg gaatagagct ttcccagttg aacctgtgaa gctacaatcc cttctgtggc
     5161 ggccttctcg taccatttga ccgctcttgc gagatcacgg tcgcccacag tgccattggc
     5221 gtagtaggcc gcgacgttat gcgccgcgat gctatggccc tggtgcgccg cgcggagaaa
     5281 ccatcgcgcc gattcgcgca aattgagtgg aactccggtg ccggtcgcat aaaagcgccc
     5341 gatgaggaac tgcgattgag catcgccaag ttcggccgcc cggcgatgcc aatttgcggc
     5401 ctccctgagg tccggttcga cgccgttgcc atgagaatag aattcggcga gcctgatgat
     5461 ggcgggcaga tagtctgctg ccgccgcctt gcgcagatag gtttcggcct tgcctaaatt
     5521 cgccggcaac ccgtcgccac taagcagtat gagtgcggcg cgatataggc cacgcggttc
     5581 gccgcgctcg gccgcttgaa taaaaaggcg cgcggcctca ttgggattag caggcctgcc
     5641 ttcacccgcc aagtacatgg aggccagggc gacttgggct cgcgcatcgc cgttgcgcgc
     5701 tgccttgtcg taccaatcgg ccgcgagctg atggtcgacc tcgacgccca gtccctgata
     5761 atagatatct cccattccga actgggcgga agcgacagaa ttcgctgcgg cgagcgaata
     5821 ccattggtag gcccgcgcgt agtcctgctc gcacccgaga ccacgccggt acatatcacc
     5881 cagaatcgct tgggcttctg cgtgcgctgc cgacgcggcg gctgagatcc agcgcattgc
     5941 ttcgttgaga tctttttcga ccgtcaggcc attcggaaaa agtgctttgc gtgccttcag
     6001 ggacgattcg ccatcatgct cggaggttgt ccggatccag tcgtccgttc cgctgggacc
     6061 ggtattactt ccgccgaaat agatgcgccc gagctgaaat tgggcgtcag catgcccgac
     6121 gtcgcccgcg cgccggaacc acgcgacagc atcgggcacg ctgcgaagaa cgctttctcc
     6181 gcgcatatac aggagaccga tgcgatactc ggcttcggca catcccagcg cgcttgctct
     6241 cttccaggcc tccagggccc ggagatgccg ccctttctta tggtcgtcta ttccgcgttc
     6301 gagccagtgc gcgtcatcgt cttgatcgga taggagctgt aatcgctcca acaagccaag
     6361 tgaagaccga tccatgcgag cctcacggct ctcgcatcga ttcactaaat ccgcgcagaa
     6421 tgccgctgag cagatacatg gcgaccgaac gggtcccgac tttcacgtcg gcttcgagcg
     6481 tcatgcccgg gataagccga aacttcgacg ggacatttcg aaacatcatt gcgtcgacac
     6541 tgcagcgcgc ccggtaatga ggttcgacgg gcttgccgtc ttcatcaatg gtaaaggcgt
     6601 tgtcgctgat ccagcgcacc acgccttcgg ccgtgccatg ttccatatga ttgaatgcgt
     6661 cgatcttgag gacacagtgg tcgcctggcc gcaaaaaccc gatttccttt gacgaaatcc
     6721 taacttccgc ctccacggcg gtgtcggtcg gcatcagggt gaagagagta tcgccctgtt
     6781 tcaagaccga gccgaccgaa agtttggcca gcgtcaggac aacagatgat tccgtcgcag
     6841 tgagactgac gaggtcctgg tgcttcgtcg ccttgtccaa ttgagccctg gcggcatcaa
     6901 gattgttgcg cgccgtgacg aggtcctggc tcaactgcgt tgaccactgc tggatgtagg
     6961 cctcgcggtc agcggtcagg gaggccaatg tatgctgagc ttcaaccagg ctgttgtagc
     7021 caaattcaat ggtgcgaagc agctccaggc gctggtcctg agatgtccac aaattatact
     7081 gcgatccggt gccgtgctgg gcaagcgtca aacgcatgtc ttcaatcttg cgggcaatgt
     7141 cctcccggtc tcgatatcgc gattgatcgg tctgaaattt ttggatggtc gtgcgcgtct
     7201 gtgcgatctt ggcgtcaaag ctcgccagtt gcgccttgta ctgggcgacc tgttgatcgt
     7261 agaagccctt ttgcactacc gcgtacttca tcaattcggg gtcggactgc tgcggaatga
     7321 cgagggggcg cccgttgagc tgcgcctcgt cgcgtgcgat ttgcgcctca aggctggcaa
     7381 tttgctgggt cagctgcttg acatcggctg ccgcgaaagt cgggtcgagg gtcgccaaca
     7441 gctgcccttg tcgcacctcg tctccctcac gcacatcgag gctcctgatg atcgacgggt
     7501 cgagtgcctg aaagacgttg atcggttgag cagccacgat ctttccgccg acgctcgtta
     7561 cgacgcggtc gagtcgcgtc aatgtcatga cgagcgtcat gctcaacagg agagcagcga
     7621 gcgtcagcac cgtgacacgc gcccagcgcg gctcgggcgc ttcgcgaatg gcgtcggttt
     7681 ccgactgaaa ctgccggatg atatcggtgg ccgcagcgtt gcgaattgct tcggcctttg
     7741 ccagcaattg ccgtttggcg gcgttcagca gccgttcaag aaacacggat cggccccctg
     7801 aacgcaagtt tgtccccacg actcgacgga acggtaacgt gctgggtttg ttgatgccac
     7861 aggttgctgt agatttcaca gcgctccaac agctcgctat gccggccgat atcgtgcacc
     7921 cggccacgtt cgaggacgag aatcgcgtcc gcggagacca gggacgacag gcggtgcgaa
     7981 atgatgatca tcgtgcggcc gcgcgcgatc cgtgcaatgt tggcgttgac gatcgcttcg
     8041 ctgtcggcat cgagcgcgct ggttgcttcg tcaaggatca gaatgcgagg atcgacgatc
     8101 agggcgcgtg cgatggcgag gcgctgccgc tgtccgcccg aaagattggg cgacccttca
     8161 tagat
//
LOCUS       DATILV010000718         2336 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2729494, whole genome shotgun sequence.
ACCESSION   DATILV010000718 DATILV010000000
VERSION     DATILV010000718.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2336)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2336)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2336
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2729494"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            201..1448
                     /locus_tag="VLJ17_17040"
     CDS             201..1448
                     /locus_tag="VLJ17_17040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018455299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside transporter C-terminal
                     domain-containing protein"
                     /protein_id="HSV24722.1"
                     /translation="MQIVQSIVGIFGLLALSFAISENRRAVSFRQAAIGLGLTVVLAA
                     LFLKIPQLKFAFSVIGDAVNAVAAASRAGTSFVFGYLGGGPLPFELKVPGNEFVFALQ
                     ALPVVLIMSVLTTLMFHWGILPPIVRAFGIALERTLGVGGAVGLSTAANIFLGMVEAP
                     LCIKPYLARLTRSEMFVVMTGGMAGIAGTVLVLYATVLGATIPDAAGHFVVASVLGAP
                     AAILISLIMVPEQPGSVSSDVGKLAPVATSTMDAIVRGTTAGLELLLNICAMLIVLIA
                     LVHLVNAVLGLLPEIAGAPVTLERMLGIAMAPVCWLMGIPWAEAVQAGALMGLKTILN
                     EFVAYLKLAALPADALSERSRLIMLYGLCGFANFGSLGIMIAGLATMAPERRDDVVSL
                     GFKSIVSGTLSTCLIGAVVGVLT"
     gene            complement(1459..1728)
                     /locus_tag="VLJ17_17045"
     CDS             complement(1459..1728)
                     /locus_tag="VLJ17_17045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="usg protein"
                     /protein_id="HSV24723.1"
                     /translation="MVSESFRKQIAGYGLTTANILYRRPDHPWLLQAYVWQAYDVCPH
                     FPELQRFLDFWQKSLEGILHSVTVAHSKLIKPAEIRAVDGVFRLH"
     gene            complement(2053..>2336)
                     /locus_tag="VLJ17_17050"
     CDS             complement(2053..>2336)
                     /locus_tag="VLJ17_17050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24724.1"
                     /translation="TRGRGLFPDPRRRPLLDRSHHRPGVLIGGRRISGDLHGVRVWLI
                     RQFCLVGALPSCPLLSDLLTSGGYVVVTRDVDLGKEPAVATKLPTLKPC"
BASE COUNT          452 a          702 c          704 g          478 t
ORIGIN      
        1 cgggaaagtt gtcctcgcca ctcgtctttt ggcaacggga acgaacgggc ctatagtatc
       61 caggtgctga ttccatcgac cgggacacag ccgtgtggct gcatctgttg tctttacccg
      121 tataagatgt atcccccccc cttcggacga acgcctgccg cgtcctcgct aagatcagag
      181 aatcggggga atgggggacc atgcagatcg ttcaatccat cgtcggcatc ttcggtttgc
      241 tggcgcttag cttcgcgatc agcgaaaacc gccgcgcagt gtcgtttcgc caagccgcca
      301 tcgggctcgg cctcacagtc gtattggcgg cgttgtttct taagattccg caactcaaat
      361 tcgccttctc agtcatcggc gacgccgtca atgccgtcgc ggcggcgagc cgcgcaggaa
      421 cgagcttcgt gttcggctat ctcggcggtg ggccactgcc gttcgagctg aaagttccgg
      481 gcaacgaatt tgtcttcgcg ctgcaggccc tgccggtggt gctgatcatg agcgtcctca
      541 ccacgctgat gtttcattgg ggcatcctgc cgccgatcgt gcgcgctttt gggattgcgc
      601 ttgagcgcac gcttggggtc ggcggcgcgg tcgggctgtc gaccgccgcc aatatctttc
      661 tcggcatggt ggaagcgccg ttgtgcataa agccgtatct cgcccgcctt acccgcagtg
      721 aaatgttcgt ggtgatgacc ggcggcatgg cgggcatcgc cggcaccgtg ctggtattgt
      781 acgccacggt gctgggcgcc acgatcccgg atgcggcagg ccactttgtt gtcgcgtcgg
      841 tgctgggggc gccggccgcg attctcatca gcttgatcat ggtcccggaa cagcccggca
      901 gcgtttccag cgatgtcggc aagctcgcac cggtcgccac cagcacgatg gacgccatcg
      961 tgcgcggcac cacggcgggc ctcgagcttc tcctcaacat ttgcgccatg ttgatcgtgc
     1021 tgattgcact ggtgcatctc gtcaatgccg tgcttggcct actgccggaa attgccggcg
     1081 ccccagtgac gctggaacgc atgcttggga tcgcaatggc accggtgtgc tggctgatgg
     1141 gcatcccgtg ggccgaagcc gtgcaggccg gcgccctcat gggcctgaag acgatcctca
     1201 acgaattcgt cgcctacctg aaactcgcag cactgccggc cgatgcgctg agcgaacgct
     1261 cacgcctgat catgctttac gggctgtgtg gcttcgccaa tttcggcagc ctgggcatca
     1321 tgatcgcagg cctggccacg atggcgccgg agcgccgcga cgatgtggta tcgcttggat
     1381 tcaaatcgat cgtatcggga acgctgtcga cgtgcctgat cggcgccgtg gtcggcgttc
     1441 tcacgtagag ttggcggctc aatgcagccg aaagacaccg tccaccgccc gaatctctgc
     1501 gggcttgatc agcttggaat gagcgaccgt tacggaatgc agaatgccct caagggattt
     1561 ctgccaaaag tcaagaaacc gctgcaattc cgggaagtgg ggacaaacat cataggcctg
     1621 ccacacatag gcttgtaata gccaagggtg atcggggcgt cgatatagga tgttggcggt
     1681 cgtcaacccg tagccggcga tctgcttgcg gaaactctcc gacaccatac ttattctccg
     1741 ttcgtaaccc ctgaattgtg cgtttcagtc ctccccattg caagccaaag agtttaacag
     1801 acaagtaaaa tcaatgtgtt agcagcattc acgtgagtct gctgacagcc ggtcccaggg
     1861 cagccctggg accgagattc gatcagttgg cggccactta gagcgctccg caaggtgttg
     1921 ccggaaagcc aacgagcaac ttcaacgttc cacattaacc cgcgtttatc cgtcaagtaa
     1981 caaatacacc gagggcgcgt tggcggaacg ttctgcgccg caatccgggt cacgagaaag
     2041 aaaaaggtca cctcaacatg gtttgagcgt gggcagtttg gtcgcgaccg cgggttcttt
     2101 gcccagatcg acatcacggg tgacgaccac gtaaccgccc gaggtcagca agtccgaaag
     2161 gagtggacag gacggcagcg cgccgacaag acaaaactgg cgtatcagcc agacccgaac
     2221 cccgtgcaga tcgccgctga tgcgtcgccc cccgatcaga actcccggcc gatggtgcga
     2281 tcgatcgagc aagggccgcc gccgcggatc aggaaataga ccgcgaccgc gagtat
//
LOCUS       DATILV010000719         2556 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1964653, whole genome shotgun sequence.
ACCESSION   DATILV010000719 DATILV010000000
VERSION     DATILV010000719.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2556
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1964653"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..706)
                     /locus_tag="VLJ17_17055"
     CDS             complement(<1..706)
                     /locus_tag="VLJ17_17055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24725.1"
                     /translation="MLKSLRNRTFVCGAAFAAGILGLGIGQALLQKQADAQGSTVLAP
                     IFEVDPLWPKPLPNNWLLGWTIGIWVDELDHIWVIHRGAGGLHNNERGAELDPPIAEC
                     CRTAPPILVYDAEGTLLRTWGGPGAGYEWPQSNHGIHVDYKGNVWIGGNGEKDAHILK
                     FTNDGKFLMQVGHLGGNKGSNDQENFGRVAKIWVDPKSNEAYIADGYLNKRVAVIDAD
                     TGKMKRYWGAYGNKPDD"
     gene            910..1494
                     /locus_tag="VLJ17_17060"
     CDS             910..1494
                     /locus_tag="VLJ17_17060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24726.1"
                     /translation="MGRAPLVIGIAAIVCIAGVAGSAAVLGLRAPANPSVMEPVWTET
                     KWPFLQDQWGFGKAFVCMPADCGVKIDVFIRPKIGFCNCATGVADDNELERVADTDLV
                     SARVRPLGPASPVKIGWMRGLMRPYLVPNEKPNERLLSVAFNDECDVVVALASFGTGD
                     PAVIAPAVMSFLASTPMVLWAKKELGLEFVRREW"
     gene            1691..>2556
                     /locus_tag="VLJ17_17065"
     CDS             1691..>2556
                     /locus_tag="VLJ17_17065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24727.1"
                     /translation="MIKLVQRRKLLCGAALAASVIGFGAGVSMLQMAATAQDTMVEAP
                     IFEVDPLWPKPLPNEALLGMTIGVSVDEQDNVWITHRGSSTLNNNEKGAELNPPVAIC
                     CRGAPAVIAFNPDGDVIHSWGGPGQGYEWPESMHGIHIDHKGNVWLGGNGAKDAQILK
                     FTKDGKFLLQSGHQGKNAGSNDAENFGRVAQIYVDPKTNDAYVADGYRNRRVAVMDAD
                     TGKIKRWWGAYGNKPNDDPQGPYNPTAEALQQFRSPVHCVALANDGLLYVCDRQHDRV
                     QVFHTDGTFVKE"
BASE COUNT          514 a          737 c          794 g          511 t
ORIGIN      
        1 tgtcgtcggg cttgttgccg taggcgcccc agtagcgctt catcttgccg gtgtcggcgt
       61 cgatcaccgc gacgcgcttg ttgagatagc cgtccgcgat ataggcctcg ttggatttcg
      121 gatcgaccca gatcttggcg acgcggccga agttctcctg gtcattgctg cccttgttgc
      181 caccgagatg accgacctgc atgaggaact tgccatcgtt ggtgaatttc aggatgtgcg
      241 cgtccttttc gccgttgcca ccgatccaga cattgccttt gtagtccaca tggatgccgt
      301 ggttcgactg cggccactcg tagccggcac ctggcccgcc ccatgtccgc agcagcgtgc
      361 cttccgcgtc gtagaccaaa atgggcggcg cggtgcggca gcattcggcg atcggcggat
      421 cgagttcggc gccgcgctca ttgttgtgca gcccgccggc gccgcgatgg atgacccaga
      481 tgtgatcaag ttcgtccacc caaatgccaa tggtccagcc gagcagccaa ttattgggca
      541 acggcttcgg ccacagcgga tcgacttcaa agatcggggc gagcacggtc gagccctgcg
      601 cgtcggcctg cttctgcagg agagcctggc caataccgag gcctaaaata ccggctgcga
      661 atgccgcgcc gcatacgaat gtgcgattgc gtaatgactt gagcatgaca cctcccgatc
      721 ccgatatttg gttcgcttgt tggggctatt atagcccaat cgatcgaact tgaaatggcg
      781 atttcgcaac cttaagcgca gaacgaggtc aagccgaata ttgcggcttt tgcgaaccgt
      841 gagcgcatga tagcatctgc agataaataa caagctcgca tcgcgaataa atcacagcgg
      901 aggcgatcga tgggaagggc gccgcttgta atcggcatcg ccgcaatcgt ctgcattgct
      961 ggagttgccg ggtcggcagc agtgttgggc ctgagggcgc cggcaaatcc gagcgtgatg
     1021 gagccggtct ggaccgagac caaatggccg ttcttgcagg accaatgggg cttcggcaaa
     1081 gccttcgtct gcatgccggc ggattgtggc gtcaaaatcg atgtctttat ccgacctaag
     1141 atcggtttct gcaattgcgc cacgggcgtt gccgacgaca acgagttgga gcgtgtcgcc
     1201 gataccgacc tggtgagtgc gagagtgcgt cctctcggcc ctgcaagtcc cgtcaagatc
     1261 ggctggatga gaggcctcat gcggccctat ctggtaccca atgaaaaacc aaacgagcgc
     1321 ctgctgtcgg tcgcattcaa tgacgagtgc gatgtggtcg tggccctcgc gtcgttcggc
     1381 acgggcgatc cagccgtgat tgcgcccgcc gtcatgtctt tcctcgccag cacgccgatg
     1441 gtgctgtggg caaagaagga gctcggcttg gaattcgtcc gccgcgaatg gtgatgcgta
     1501 gcgcagacaa ggggttcatg aaacgttgag ccgccttttc ggcgctagcg ccgggcttgt
     1561 cccggccatc cacgcgtgcc tgaagctccg cgacgagcgc gggcacgagg agtggttatt
     1621 cgatcaaggg ggaaccgcgt tctaaaagct tcatgtatcc atgctgaact aagaacaaac
     1681 ggaggtgact atgattaagc tggtgcaacg gcggaaactt ctttgcggcg ccgcgctggc
     1741 ggcaagcgtc atcgggtttg gcgccggcgt gtccatgctg caaatggcgg cgaccgcgca
     1801 ggacacgatg gtggaggccc cgatctttga agttgatccc ctttggccga agccgctgcc
     1861 caacgaagcg ctgctcggca tgaccattgg ggtttcggtc gatgagcagg acaacgtctg
     1921 gatcacgcat cgtggcagct caaccttgaa caataacgag aagggtgcag agctcaatcc
     1981 gccggtcgcg atctgctgcc gcggtgcgcc ggccgttatt gccttcaacc ccgatggcga
     2041 cgtgatccat tcatggggcg gtccgggcca aggttacgaa tggccggagt cgatgcacgg
     2101 catccatatc gaccacaagg gcaacgtatg gctcggcggc aacggcgcta aggatgcgca
     2161 aatactcaag ttcaccaagg acggcaagtt cctgttgcaa tccggccacc agggtaagaa
     2221 cgccggcagc aacgatgcgg aaaattttgg gcgcgtcgcg cagatctatg tcgatccgaa
     2281 aaccaacgat gcatatgtcg ccgacggtta tcgcaaccgg cgggtggcgg tgatggatgc
     2341 cgacaccggc aaaatcaagc gctggtgggg cgcctacggc aacaagccca atgacgaccc
     2401 gcagggacct tacaatccga ccgcagaggc cttgcagcag ttccgcagcc ccgtgcactg
     2461 cgtcgcgctg gcgaacgatg gcctcctcta tgtctgcgat cggcagcatg atcgcgtgca
     2521 ggtcttccat accgacggca cattcgtgaa ggagca
//
LOCUS       DATILV010000720         4732 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_169239, whole genome shotgun sequence.
ACCESSION   DATILV010000720 DATILV010000000
VERSION     DATILV010000720.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4732)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4732)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4732
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169239"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(85..1062)
                     /locus_tag="VLJ17_17070"
     CDS             complement(85..1062)
                     /locus_tag="VLJ17_17070"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV24728.1"
                     /translation="MRTDRRCLIAGTLALGVAGMTSARAQTAYPNRPVRVIVPFAPGG
                     VTDVVARLISGKISEQFGKQFYVENVVGGSGNVGMGQAARAAPDGYSMLTAFSSFVIN
                     PAMFERVPYDPVNDFNPVALAVTSTTVIVVNAELPVSNITELVALIRANPGKYSYASA
                     GTGTTSHLAGEQFRLALALDLVHVPFSGGAPAMAAVVAGHTPIGMGTPTVAVPLVNDG
                     KLSAIAVTSKTRTQTLPQVPTMAESGYRDIEGDSFVGFVVPAGTPKDIITLLNGEIVK
                     SLATADMKERQAALGNDVVASTPEEFGHRLRAELAIWAKVIKAANIKAG"
     gene            complement(1076..2050)
                     /locus_tag="VLJ17_17075"
     CDS             complement(1076..2050)
                     /locus_tag="VLJ17_17075"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV24729.1"
                     /translation="MQFPRRRFLQFSGAAVAAPALPRLAMALDYPTRPVRFIVPLAPG
                     GGLDFVARLTSEYMSRAIGQQFYIENKLGAGGMIGIETAAKSAPDGYSVLITNDNVAS
                     APHVLSVNTEFVKDLVPVIELSRQTLMLAVHNSFAVRSVAEFVAAAKARPGMSFATSG
                     VGSNQHILAEWFAKQAGIKLEHVPYRGAGQAVNDLIAGHVLIGFLGPTALLAHYKAGT
                     LRFLAQSSKARAQSMPEVPTLEEAGFKDVVLESWYGAFVPAGTPPSIIAYLNTEMAKT
                     MADPATRDSLLQTATEPVGGTAEEFSRVVREDSAKYARLAKELGIRIN"
     gene            2442..>4732
                     /locus_tag="VLJ17_17080"
     CDS             2442..>4732
                     /locus_tag="VLJ17_17080"
                     /inference="COORDINATES: protein motif:HMM:NF014763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV24730.1"
                     /translation="MWPTTSEIGATKLWTRAILTARIPFSQFGAYASILLGISVILLI
                     WLGAVYFIRGERDQTERATFQIGSNLARAFEEQLIRLIRAADQTLLYIRDSYSKDRFD
                     MSLWSRNSQFLTDFAFQVMVIDKHGMTVASNIDSNDTQVNLRDREYFKVHAQRDTDEL
                     YISQPVLGRVSGKWSIQLTRRVSALDGTFDGIVVISLNPDYLARFYDTIDIGEHGSVT
                     LVGTDGTVRAGSPADDAIGTSMGAGKLFGQLAVSQAGALYDDQQRDGVIRMLSYRQIK
                     GYPLVVVVGLGRDDIFRVFEQNRNKYLLVAGLLSAWLLAMTIVILRYQRGLTRARDAA
                     QAGTRARSEFLATMSHEIRTPMNGVIGMAELLLDSGLQDEQVKLADTLRESAEYLLQL
                     IDDVLDFSKLDAGRIELEKIPFDIHQLVEGAVDVLTPRASARCIYCTAEMASCVPRRV
                     IGDPARLRQVLLNLIGNAIKFTQVGGVTVTVDAKSGDHPGYFHLSFRVVDTGIGIPAD
                     AVGLLFREFSQLDSSISRRFGGTGLGLAICKRLVALMGGNIGVESELGHGSTFHFAIE
                     VEAAPPPVERAAEVAQGNAENLPTSPLIVAADAPDALQPLRILVAEDNPTNQMVIGKL
                     LASLGYKAEIVSNGAEAVAACTACSYDLIFMDLMMPEMDGLTATAAIRKSSGPNCRTR
                     IVALTANAFPEDREKCREVGMDGFLAKPVTRKVLATFLGSLVPRADAPPIAPAVVEEA
                     AAVFDASVYGELKDVLGAQDIAAV"
BASE COUNT          896 a         1427 c         1424 g          985 t
ORIGIN      
        1 tgggtcttct gggtaggtga ttggtcgtga ttggggccac cgccgcggtg acaaagtcag
       61 gttggtccac tgcgtctatc gcgcttaccc tgccttgatg ttggcggcct ttatcacctt
      121 cgcccatatg gccagctccg ccctgagccg gtggccgaat tcttctggcg tgctggcgac
      181 cacgtcgttg cccagcgccg cctgccgctc cttcatgtca gctgtcgcca agcttttgac
      241 gatctcgccg ttaagtaatg tgatgatgtc tttcggggtt ccggccggca ccacgaaccc
      301 tacaaagctg tcgccctcga tgtcccgata accgctttcc gccatggtcg gtacttgggg
      361 cagcgtctgg gtacgcgttt tgctggtaac ggcgatggcg ctcagcttgc cgtcgttgac
      421 cagtggcacg gcgacggtcg gggtgcccat gccgatcggc gtgtggccag caacaacggc
      481 ggccatcgcc ggggctccgc cgctgaatgg cacgtgcacc aggtcgagcg cgagcgccag
      541 acggaactgc tcgcccgcaa gatgggatgt cgtcccggtg ccggctgatg cgtagctgta
      601 tttgcccgga ttggcccgga tgagtgcgac aagttccgtg atgttcgaca ccggcagttc
      661 ggcattgacg acaatcacag tcgtcgaggt gacggccagc gccaccggat tgaagtcgtt
      721 gacgggatca tacggaactc gctcgaacat ggccggatta ataacgaagg agctgaacgc
      781 cgtcagcatc gaatagccat cgggtgcggc gcgcgcggcc tgccccatcc cgacattacc
      841 ggagccgccc acgacgtttt caacgtagaa ctgtttgccg aattgctcgc tgatttttcc
      901 ggaaatgaga cgcgccacca catcggtcac gccgccgggc gcgaacggca cgatcacccg
      961 caccggccgg ttaggatagg cggtttgcgc gcgcgccgac gtcatacccg cgacgccgag
     1021 cgcaagtgtc ccggcgatga ggcagcgacg atctgttcgc atggcgtggt cctatctagt
     1081 tgatcctaat gccaagctcc ttcgcaagcc gtgcgtattt cgcggaatcc tcccgcacca
     1141 cacggctgaa ctcttcggcg gttcccccaa ccggctcggt cgcagtctga agcaggctgt
     1201 cgcgggtggc cgggtccgcc atggtcttgg ccatttcggt attgagatat gcgatgatgg
     1261 atggtggcgt gccggccggc acgaaggcgc cataccagga ttcaagcacc acgtccttaa
     1321 aacccgcctc ctccaacgtc ggcacttccg gcatgctctg ggcgcgcgcc ttggaggatt
     1381 gcgcaaggaa acgcaaggtt ccggccttgt agtgcgccag cagcgccgtc ggtcccagga
     1441 aaccgatcag aacgtggccg gcgatgagat cgttgacggc ctgtccggcg ccacgataag
     1501 gcacatgctc caatttgatg ccggcctgct tggcgaacca ttccgccaga atgtgttggt
     1561 tggagccgac acccgaggta gcgaaactca tgccgggtcg cgctttcgca gccgcaacga
     1621 attcggcaac tgatctgacc gcgaacgagt tgtgcaccgc aagcattagc gtctgacgcg
     1681 acaattcgat taccggcacc agatccttca cgaactccgt gttcacgctc aagacgtgcg
     1741 gcgcgcttgc cacgttgtcg ttggtgatga gcaccgaata accgtcgggt gcgctttttg
     1801 ccgcagtctc gatgccgatc atgccgccgg caccgagctt gttctcgata tagaactgct
     1861 ggccgatggc gcgcgacata tattcgctgg tgagccgcgc cacgaagtcc aacccgccgc
     1921 ccggtgccag cggcacgatg aagcgtaccg gccgggtcgg ataatcgagc gccatagcga
     1981 ggcgtggcaa agcgggcgca gctacggcag cgcccgagaa ttggaggaag cggcggcgag
     2041 gaaattgcat ggcggtaccc cggctaatcg catcaatgct ccagcttccc cgctttcgga
     2101 cgccttttca atcggcaatt gccatcactc catcgcaacg gcttgagggg atggcaccgc
     2161 atctgcggtg tcggcttgct ccattctttc aatggccggc gtttgtctga acggaggcct
     2221 tgtcgcatca cctcggtgcc gaggcaatgt tgttactgtc gaccgcggtg acctcagcgg
     2281 tagcctcgcg tgctaaagct catgtacctt ttgatccatt tgccatttcg ttaagttttg
     2341 gtttccgccg tttgaaacat ttccatattt acattgccgt aaatggtttt ggttaggata
     2401 ccgcttccct gcgggcactc tagaatccag ataacggcaa catgtggccg accacgagcg
     2461 aaatcggcgc gaccaaactg tggacgcgag ctatcctcac tgcgaggatt cctttttcgc
     2521 agttcggcgc atatgccagc attttgcttg ggatatcggt catactgctg atctggttag
     2581 gcgccgtcta tttcatccgt ggcgagcgcg accaaaccga gagggctacc ttccagatcg
     2641 gcagtaatct tgcgcgggcc tttgaggagc aactcatccg cttgatccgc gcggcagacc
     2701 agacactgct ttatatccgc gattcatatt ccaaggaccg tttcgatatg tccttgtggt
     2761 cgcgcaacag ccagtttctg accgacttcg catttcaggt catggtcatc gacaagcacg
     2821 gcatgacggt cgccagcaat atcgactcaa acgatacgca agtgaacctc cgtgatcgcg
     2881 agtacttcaa agttcatgcc caacgcgaca ccgacgaatt gtatatcagc cagcctgtgc
     2941 tggggcgtgt gagcggcaag tggtcgatcc agctgacccg acgggtgagc gcgctcgacg
     3001 gcacgtttga cggcatcgtg gtgatctccc ttaaccccga ctatctggcc cggttttacg
     3061 acaccatcga catcggcgag catggctcag tgaccctcgt aggtacggac ggcaccgttc
     3121 gggcaggcag tccggccgat gacgccatcg ggacctcgat gggcgccggc aagctgttcg
     3181 ggcagctcgc agtgtcccag gccggagcac tctatgacga ccagcagcgc gacggagtca
     3241 ttcgcatgct gagctatcgg cagatcaaag gttatccgct cgtcgtcgtc gtcgggctgg
     3301 gtcgcgatga tatcttccgc gtgttcgagc aaaaccggaa caagtacctg ttggtcgctg
     3361 gactcctcag cgcatggctg ctcgccatga ccatcgtaat cctacggtac cagaggggtc
     3421 ttacgcgggc tcgcgacgcc gctcaggccg gtacccgcgc ccgttccgag ttcctcgcca
     3481 cgatgagcca cgagatacgt acaccgatga acggcgtaat cggcatggcc gaactcttgc
     3541 tggacagcgg attgcaggac gaacaggtaa agcttgcaga cacgttgcgg gagtccgccg
     3601 agtaccttct tcaactcatt gatgacgtgc tcgacttctc caagctcgac gccggccgca
     3661 tcgagttgga gaaaattccc ttcgacattc accaactggt ggaaggtgcc gtggatgtgc
     3721 tgacgccgcg cgcaagcgcc aggtgcatct attgcaccgc cgaaatggcg agctgcgttc
     3781 cgcgacgtgt gatcggcgat cctgcccgcc tacggcaggt gttgctgaac ctgatcggca
     3841 acgccatcaa gttcactcag gtcggcggcg tgacagtcac ggtggacgca aaatccggcg
     3901 atcaccccgg atactttcac ctctcgtttc gggtggtgga tactggtatc ggaattccgg
     3961 ctgacgcggt cgggctgttg tttcgcgaat tttcacaact ggacagttcg atttcgcgcc
     4021 gcttcggagg aaccgggctc ggtcttgcga tctgtaagcg ccttgtggcc ctgatgggtg
     4081 gaaatatcgg cgtcgaaagc gaactcggac atggaagcac gttccacttc gcgatcgagg
     4141 tcgaggcagc gccgccgccg gtggaacggg ccgcggaagt tgcgcagggt aatgccgaaa
     4201 acttgccgac ctcgccgcta atcgtcgccg ccgacgcacc agatgccctg caaccgttgc
     4261 gcattttggt agcagaggac aatccgacca accaaatggt gattggtaag ctcctagcct
     4321 cactcggcta caaggctgaa atcgtgagca atggcgccga ggcggttgcg gcctgcacgg
     4381 catgttcata cgacctgatt tttatggact tgatgatgcc ggagatggat gggcttaccg
     4441 cgactgccgc gatccgaaaa tcatccggcc ccaattgccg cacccgcatc gtggcgctga
     4501 ccgccaatgc gtttcccgaa gatagggaaa aatgccgcga ggtcgggatg gacggcttcc
     4561 tcgccaagcc ggtaacccgg aaggtcctgg cgacgttcct cggttcgctg gtgcctcgcg
     4621 ccgacgcccc accgattgcg cctgccgtcg tggaggaggc ggccgctgtc ttcgacgcat
     4681 cggtctatgg cgaactcaag gatgtgctcg gcgcgcagga catcgcggcg gt
//
LOCUS       DATILV010000721         2077 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1194569, whole genome shotgun sequence.
ACCESSION   DATILV010000721 DATILV010000000
VERSION     DATILV010000721.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2077)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2077)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2077
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1194569"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1027
                     /locus_tag="VLJ17_17085"
     CDS             <1..1027
                     /locus_tag="VLJ17_17085"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSV24731.1"
                     /translation="GSLFAASQLSAQTESKLAALEKLPVQERQQRLLEDAKSEGEAVI
                     YANMDVAAMRPLTEGFMKRYPGAKAASVHFSGAAIITRIDSEARAGKPLSDVVLSGQL
                     GVLALIDKKVAARYRSPEREFYGEGFKDKEGLWTAYMTNVMVSAYNTRQVKKDEAPRT
                     VEDLLKPRWKGKLTMDSQSYVWFGTILQYLGEESGLRFMKRLNEQNISHQRGRRLMTQ
                     LVAAGEFDMAVETNLNSVLSLGKQGAPLSFAPIQPYFLSPSLVFMSANAPRPYTGALF
                     IDYLLSEEGQKVIVTTNRMPAHTKVKSPESQLLEGQDVRMPDILDIGKRYQAIGNRYR
                     EIFAGAG"
     gene            1219..>2077
                     /locus_tag="VLJ17_17090"
     CDS             1219..>2077
                     /locus_tag="VLJ17_17090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24732.1"
                     /translation="MIDGKVGIEGYELDIDPNFVSSGERHYKFLHGEWDVGECSEASL
                     LRAIENGQELLAIPVFFERGPRQRNIYHCEGRLKNPSELKGKKFGCFRYGATAVVWAR
                     GYLLDAHEIKTTDMQWFVSGREVFIGHELPVKVERIDPPPPFGEEKLQLSKMLSEGVL
                     HGAVVPGDSGYLGLFGGGETPTMMAAYPGVKPLFEDDEEIIRYTKQTGINPIMHVLSI
                     RREIVKRYPDFPAKLTRAFMEARDAAAPYMDAGEIAGYAKEREVLGEDPYAYVMGENE
                     KRSLAALNRY"
BASE COUNT          497 a          591 c          566 g          423 t
ORIGIN      
        1 cggttctctt ttcgccgcgt cgcagctctc agcgcaaacc gagtccaaat tagcggctct
       61 cgaaaaactg cccgtccaag aacgacaaca acgtctgctg gaagacgcca aaagtgaagg
      121 cgaagcagtc atctacgcta atatggatgt cgcggccatg aggccgctca ccgaaggatt
      181 tatgaaacgc tatcctgggg caaaggccgc cagcgttcat ttttccggcg ccgcgatcat
      241 cacgcgtatt gactccgaag cccgagcagg aaagccattg tcagatgtcg tcctgagcgg
      301 ccagttagga gtcctggctc tgatcgacaa gaaagttgcg gcgcgctacc gctcccccga
      361 gcgggaattc tacggcgaag gttttaaaga caaagagggt ctgtggaccg cttatatgac
      421 caacgtcatg gtgagcgcct ataatacgcg ccaggtcaag aaagacgagg cgccgcgcac
      481 ggtcgaagat ctcttgaagc cgcgctggaa gggcaagctg acgatggaca gccagtccta
      541 tgtatggttc ggcaccatcc ttcagtatct tggagaggaa tcgggattgc gttttatgaa
      601 gcgcctgaat gagcagaata tctcgcacca gcgaggccgg cgactcatga cacaactggt
      661 ggcggcgggc gaattcgata tggccgtgga aacgaacctc aactccgtgc tgagtcttgg
      721 taaacaaggc gccccgctgt ccttcgctcc cattcagccc tacttcctga gtccaagtct
      781 cgtattcatg agcgccaacg ccccgcggcc ttataccggc gcactattta ttgattatct
      841 gctgtcggag gaagggcaaa aagttatcgt gacgaccaat cgcatgcccg cccataccaa
      901 agttaaatca cccgagagcc agctcctcga aggtcaggac gtgcgcatgc ccgacatttt
      961 agatatcggc aaaagatacc aagccatcgg caaccgctac cgcgaaattt ttgccggagc
     1021 gggttaacct catggttcca atcgttcaag cagttcaaaa cgttccaatg ttttttcgat
     1081 ccgttcgaac gtttggaacg actggaacgg tttgaacgat tggaacaata tccttgaagg
     1141 actaaccgaa aggagtcatc tatgacaagc aaccctcgca ttactttggg tctccccgat
     1201 catccgcgtt gccgcgcaat gatcgacggc aaggtcggca tcgagggcta tgaactcgac
     1261 attgacccca acttcgtttc ttccggggaa cgtcattaca aatttcttca cggcgagtgg
     1321 gacgtcggcg aatgttccga ggcgagcctg ctgcgcgcca tcgaaaacgg gcaggagctt
     1381 ttggccatcc ccgttttctt tgaacgcggg ccgcgccagc gaaacatcta ccactgtgaa
     1441 ggcagattga aaaatccgtc ggagctcaaa ggcaagaaat tcggctgttt tcgctatggg
     1501 gccacggccg tcgtttgggc gcgcggctac ctgctcgacg cgcacgaaat caagaccaca
     1561 gacatgcaat ggttcgtctc cggccgagaa gttttcatcg gtcacgaact tcccgtgaaa
     1621 gtcgagcgca tcgatccgcc gccgcctttc ggggaagaga agcttcagct ttccaaaatg
     1681 ctgagtgaag gcgtccttca cggcgccgtc gtgccgggcg actcaggcta cctgggatta
     1741 ttcggcggcg gtgagacccc gaccatgatg gctgcctacc cgggcgtaaa gccgctcttc
     1801 gaagacgatg aggaaatcat tcgctacacc aaacaaaccg ggatcaaccc gatcatgcac
     1861 gtactttcga tccgccgtga aatcgttaag cgctatcccg acttccctgc gaaactgacc
     1921 cgcgctttca tggaagcgcg agatgccgcc gcgccgtaca tggacgccgg agaaatcgcc
     1981 ggctacgcga aagagcgcga ggtgctcggc gaagatccat acgcctacgt catgggcgag
     2041 aacgaaaaac gctcgttggc ggcactgaat cgctatc
//
LOCUS       DATILV010000722         3420 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3244993, whole genome shotgun sequence.
ACCESSION   DATILV010000722 DATILV010000000
VERSION     DATILV010000722.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3420)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3420)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3420
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3244993"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..543)
                     /locus_tag="VLJ17_17095"
     CDS             complement(<1..543)
                     /locus_tag="VLJ17_17095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24733.1"
                     /translation="MPKLGLLRACMLTGIASVFAGLPASDSASAQTHPRFAQFNRQPQ
                     PPQQQQTPFVKDPGVRNGDAGAGGPLPGLNTDETTFFDAAKEVFSEVDSVSGGPEPGA
                     GLGPRFNMNGCAGCHAFPDVGGSSPVVNPQVAVATLDGAKNTVPSFITADGPVREARF
                     VNNPDGTPDGGVHDLFVITGR"
     gene            complement(835..1398)
                     /locus_tag="VLJ17_17100"
     CDS             complement(835..1398)
                     /locus_tag="VLJ17_17100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C"
                     /protein_id="HSV24734.1"
                     /translation="MINNHLPTLFSTLVVLAAVAAPANAAEGVEAKLQVCGSCHGDNG
                     QPIDATIPIIWGQTEYFIVKQLHDYKSGDRENTVMAAFAKRLTQAELRPAAAYFAKKS
                     WPARPTPAASASPPNGIAVCQICHQENFVGGLPAPRLAGQSYEYLVEAMRSFAEGQRT
                     NNADMVKLMEALSPAERETIARYISGL"
     gene            1735..2553
                     /locus_tag="VLJ17_17105"
     CDS             1735..2553
                     /locus_tag="VLJ17_17105"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSV24735.1"
                     /translation="MKITVLAALLFGSALTAGNAAAQPAAFNDVGVTMGHWHIVSKDV
                     EANKKLFLGMGAKMFMVGANPLMMFPGVYINLNLGNEKGEGGSQGSVVNHVGFIVNNV
                     QEQAAKWKAAGVPVLPGNNNRLDQAFVETPDGVRIEILEDKTQSMPIRHEHVHFFLPE
                     GEIAKAQAWYAKTFGGKAGTRNNAPIVDVPGAQLRFNKADTAQAPTRGRILDHIGFDV
                     KDHAAFVKKIEAEGIKLDEPVRKTPTGSTITYITDPWGTRIEIIERGPLGPPVL"
     gene            complement(2669..>3420)
                     /locus_tag="VLJ17_17110"
     CDS             complement(2669..>3420)
                     /locus_tag="VLJ17_17110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="transaldolase family protein"
                     /protein_id="HSV24736.1"
                     /translation="DRLAVSFGTELANIVPGRVSTEVDADLAFDTRATVDKARAIIAA
                     YEVRGVGRDRILIKVASTFEGIRAAETLQRDRIDCNLTLLFSLVQAAACADAAAFLIS
                     PFVGRILDWHVKAGGGPYTAETDPGVTSVRSIYAYYKTHGFGTAVMGASFRNAGEIEA
                     LAGCDRLTIAPALLDALAADQGPLARRLDPTSPGESPARLILDERKFRFLLNQDAMAT
                     EKLAEGIRLFVKDLYALRAMVRNILVRADAA"
BASE COUNT          713 a         1027 c         1042 g          638 t
ORIGIN      
        1 gcgaccggtg atcacgaaaa ggtcgtgcac gccaccatcg ggcgtgccat ccggattgtt
       61 gacgaaccgc gcctcccgta ccggaccatc tgcggtgatg aaggagggca cggtgttctt
      121 ggccccatcc agagtcgcaa ccgcgacttg cggattgacc acagggctag agccgccgac
      181 gtccgggaac gcatgacacc cggcgcaccc attcatgttg aagcgcgggc ctaagccggc
      241 gccgggttcg ggcccgccag agacagaatc gacctcggag aaaacttctt tggctgcgtc
      301 gaaaaaagtg gtctcgtcag tattaagacc aggaagtgga cctccggcgc cggcatcccc
      361 attccgtacg cccggatcct tcacgaatgg cgtctgctgc tgctgcggcg gctgcggctg
      421 gcgattgaac tgcgcgaacc tcgggtgcgt ctgggctgac gccgaatctg aagcgggcaa
      481 ccccgcgaac acgctcgcta tgcctgtcag catacaagcg cggagcaagc caagctttgg
      541 catgatccct ccccatacca caaatgagtg agactcacat gcgcgcggtt tcacttcacc
      601 acgcgatgga gtcgacctgc aacccacaag tcgactcaca acatcggaaa acaagttgtc
      661 ggaccaatgt cggctggatg ttcgctcgat gtctgctgga tgttcttttt aaataaaaag
      721 tcaggaggac atcacggctc atttccgatt tcttgcggcg aagttgagct gattttgtga
      781 ttgtcgagcg actccaagcg tgcgccctcc ataaaccaat catgaattcg ccgatcagag
      841 gccagatatg tagcgagcta ttgtctcccg ctcggcgggt gaaagtgctt ccatcaattt
      901 caccatgtcg gcattgttgg tccgctgacc ttcggcaaag cttcgcatcg cctcgaccag
      961 gtattcgtag ctttggccgg ccagccgcgg cgccggcaga ccgccaacaa aattctcctg
     1021 atggcaaatc tggcatacag cgatcccgtt gggcggcgac gcggaagcag cgggagtggg
     1081 ccgtgctggc cagctctttt tcgcgaaata agccgctgcg gggcgcagtt ctgcctgggt
     1141 gaggcgtttg gcaaaggcag ccatgactgt gttttcgcga tctccactct tgtagtcatg
     1201 caattgcttc acgataaaat attccgtctg accccagatg atcgggatgg ttgcatcgat
     1261 gggttgaccg ttgtcgccgt ggcacgagcc gcagacttgc aattttgcct caacgccctc
     1321 agcggcgttt gccggcgcgg ccaccgcggc taagacgacc agtgtgctga agagagtcgg
     1381 aagatggttg ttgatcatgg ttacgctacc gttgtttgag tgcccgcagt cccctgacgc
     1441 aaccaacgcg ccggaaccct tataagagat gccgcagtca ggcctatggc gcaagccggt
     1501 caggatctct aacgggcccg cagcctgtag gtgaagcgga agcgaaaccc agggtcggcg
     1561 ttgccgtaat tgatagcgcg gtcccggatt acgctgcgct ccgtccggct acacttgcta
     1621 cgaccgtggc gggaaaattc agcccggcta atcttcccta tattcacgcg agctgatagc
     1681 gttcacgtcg catcgccagc tcatagaaaa atacggctca acagggaggt atccatgaag
     1741 atcactgtac tcgcagcttt attgtttggt tcagcactga ccgcaggcaa cgcggccgcg
     1801 caaccggccg cgttcaacga cgtcggcgtg accatgggtc actggcacat cgtctcgaag
     1861 gacgtggaag ccaacaagaa actcttcctt ggcatgggcg ccaagatgtt catggttggc
     1921 gcaaacccgc tgatgatgtt ccccggcgtc tatatcaatt tgaatctcgg gaacgagaag
     1981 ggagaaggcg gcagccaggg ttcggtggtg aaccatgtcg gcttcatcgt caacaacgtc
     2041 caggaacagg cggccaagtg gaaggccgcg ggtgtgccgg tgctgccggg caacaacaac
     2101 cggctggacc aagccttcgt cgagacgccg gacggggtac gcatcgaaat cctggaagac
     2161 aaaacacaat cgatgccgat ccgccacgag catgtccact tcttcctgcc cgaaggagag
     2221 atcgccaagg ctcaggcttg gtacgcgaag acttttggtg gcaaggccgg cacccgcaac
     2281 aacgcgccga ttgtcgatgt gcccggtgcc cagctccgct tcaacaaggc cgatacggcg
     2341 caagctccga ccagggggcg catcctcgat cacatcggtt tcgacgtgaa ggatcacgcc
     2401 gccttcgtca agaagatcga ggcggaaggc atcaagctcg acgagccggt tcgtaagact
     2461 ccgaccggaa gcaccatcac gtacatcacg gatccctggg gcacccgcat cgagatcatt
     2521 gagcggggcc cgttggggcc gccggtgcta tagccgtcaa cgtggcgagc ggggcgcgcg
     2581 tccgcgcgcg cccaagcgct tccggttgat cgaaatcgcc ccttttttgg agaacgcaac
     2641 aggaaccggg ggccgcgctc gccacaaatt acgcagcatc ggcacgaacc aaaatatttc
     2701 gcaccatcgc ccgcaatgcg tagaggtcct tcacgaacag ccgaatgccc tcggcgagct
     2761 tttccgtcgc catggcatcc tgattaagga gaaagcggaa tttcctctca tcgaggatga
     2821 gccgtgcggg ggactcgccg gggcttgtcg gatcgagccg gcgtgcgagc ggcccttgat
     2881 ccgccgcgag tgcgtcgagc agcgccggcg caatggtaag acggtcgcag cccgccagcg
     2941 cctcgatctc gccagcattg cggaacgatg cgcccatgac ggcggtgcca aaaccgtggg
     3001 ttttgtaata ggcatagatg ctgcgcaccg acgtcacgcc cggatcggtt tcggccgtgt
     3061 agggaccgcc gccggccttg acgtgccaat caagaatgcg gcccacgaag ggcgaaatca
     3121 gaaacgcggc cgcgtccgcg caggccgccg cctgcaccag cgagaacagc agagtgagat
     3181 tgcagtcgat gcggtcgcgc tgcagcgttt cggcggcccg gatgccttcg aaggtcgagg
     3241 cgaccttgat caggatgcgg tcgcggccaa cgccgcgcac ctcataggcc gcgatgatgg
     3301 cgcgggcctt gtcgacggtt gctctggtgt cgaaggcaag atccgcatcg acctcggtcg
     3361 agacgcggcc ggggacgatg ttggcgagtt ccgtgccgaa cgacaccgcc agccggtcgc
//
LOCUS       DATILV010000723         2322 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2217512, whole genome shotgun sequence.
ACCESSION   DATILV010000723 DATILV010000000
VERSION     DATILV010000723.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2322)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2322)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2322
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2217512"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            255..626
                     /locus_tag="VLJ17_17115"
     CDS             255..626
                     /locus_tag="VLJ17_17115"
                     /inference="COORDINATES: protein motif:HMM:NF042840.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6788 family protein"
                     /protein_id="HSV24737.1"
                     /translation="MMIRSKTDSLADVISWMEGEAASLWPALLGSLSYRRTRCMQPNC
                     AACQSGEQHRSYVLYGRHQGRRFAIYVPEDLIDEVRRAVDNGRALQDLLMQAGPRYVK
                     ALKRARESKPTPKSKRKSKNG"
     gene            631..2061
                     /locus_tag="VLJ17_17120"
     CDS             631..2061
                     /locus_tag="VLJ17_17120"
                     /inference="COORDINATES: protein motif:HMM:NF033593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISNCY family transposase"
                     /protein_id="HSV24738.1"
                     /translation="MARATTRQITFADLQLALQGVQLDPTLQAICDLLDQNREVLERV
                     QGDLDRGLKNPSKGRHGLTARQVVGALVLMRIKNWDYRELRERIADGVTLRQFTDFHC
                     DKVPKHDAFNRGINRLTPETLKYINDVFVGVAVELGLEDGSKLRVDTTVVETDIHHPT
                     DNTLLWDVVRVLTRLVKQLAKALKRPRIKGFCDRSRVAHRRMYEIQRMTTRQRRGSPQ
                     TEKYRELIEIAEEVVTSATSVVEATATMRATDLPAALKIESIRADIEHYCGLGARVID
                     QARRRVLNGEQVPTAEKIYSIFEPHTDLIKRGKVRTPIEFGHKVFLAESAIGLITQYE
                     VLKGNPVDEAHVIPSLQHHRRVFRRGPKLYSTDRGFFSEPNVEACVNGGVTTVCIPQR
                     GGSRTPQREAYERSRAFKDGQRFRAGIEGRISVLMRGRGMKRCLAQGAERFELFVGAA
                     VLANNLMKISELLIKRAKRRAKRTNR"
BASE COUNT          511 a          682 c          696 g          433 t
ORIGIN      
        1 cgtaaaggag ctgtatcgct atctcgacgc ttccgccgac atcattaagc cgcagcgcac
       61 atcggccaag cccagtagtg accaaaaaaa ctctgcccct ttgatgcaaa agggtgttgc
      121 ctatcaaaat gcggaggttg ggctagacta gtttctgtcg caaaaggcac aatatgcctg
      181 tggaattggc atttccggcg tttttttgct gacagttgtt tgttgcttat acatgtgcag
      241 tatgacacat attgatgatg attcgcagca agaccgattc gctggccgat gtcatttcct
      301 ggatggaggg cgaggcagct tcgctgtggc cggcgttgct cggctcactg agctatcgtc
      361 gtacccgatg catgcagccg aactgtgcgg cgtgccagtc cggcgaacag catcgcagtt
      421 acgttctcta cggccggcac caggggcgcc ggtttgcgat ctatgttccg gaagacctga
      481 tcgacgaggt tcgccgtgcc gtggacaacg ggcgtgccct gcaggacctg ctgatgcagg
      541 ctggaccacg ctacgttaaa gcgttgaagc gcgcgcgtga gagtaagccg acgcccaaga
      601 gcaagcgcaa gagcaagaac gggtgaagct atggcgcggg cgacgacgcg tcagataacc
      661 tttgccgacc tccaactggc gcttcagggc gtgcagttgg acccgacgct gcaggccatt
      721 tgcgatttgc ttgaccaaaa tcgtgaggtg ctggagcgcg tgcagggcga cctggatcgc
      781 ggcctgaaga atccgagcaa gggccgccac ggccttaccg cgcgtcaggt ggtgggcgcg
      841 ctcgttctga tgcgcatcaa gaactgggat tatcgcgagc tgcgcgagcg catcgccgac
      901 ggagtgaccc tgcgccagtt caccgatttc cactgcgaca aggtgcccaa gcatgatgcc
      961 ttcaaccgcg gcatcaatcg gctgacgccg gagacgctca aatacatcaa cgatgtcttt
     1021 gttggagtcg ccgtggagct ggggttggag gacggcagca agctgcgagt cgacaccacg
     1081 gtggtcgaga ccgacattca tcatccgacc gacaacaccc tgttgtggga cgtggtgcgg
     1141 gttctcacac gcttggtcaa gcaactcgcc aaggcattga aacggcctcg tatcaagggt
     1201 ttttgtgatc gctcccgggt cgcgcatcgg cgcatgtacg agattcaacg tatgacgacc
     1261 cgccagcgcc ggggctcacc gcaaacagag aagtaccggg agctgatcga aattgccgaa
     1321 gaggtggtga cgagcgctac aagtgtcgtt gaggcgaccg ccacgatgcg cgccacagac
     1381 ctgcccgctg ccctgaagat cgaaagcatc cgcgccgaca tcgagcatta ttgcggcctc
     1441 ggcgcacggg tgattgacca ggcgcgccgc cgcgtgctca acggcgaaca ggtgcccact
     1501 gcagagaaaa tctattcgat cttcgagccg cataccgacc tgatcaagcg cggcaaggtg
     1561 cgcacaccaa tcgagttcgg ccacaaggtg tttctggccg agagcgccat cggtttgatc
     1621 actcagtatg aagtgctcaa gggaaatcct gtagacgagg cccatgtgat accctcgctg
     1681 cagcatcacc gccgcgtctt ccgccggggc ccgaaactct acagcaccga tcgcggcttc
     1741 ttcagtgagc cgaacgtgga ggcgtgcgtg aacggtggcg tcaccacggt ctgtattccg
     1801 cagcgcggcg gcagcaggac gccgcaacgc gaagcctacg aacgatcgcg cgcattcaag
     1861 gacggccagc gttttcgtgc tggcatagag ggccgcatct cggtgttgat gcgcggtcgc
     1921 ggcatgaagc gttgcctcgc ccaaggcgcc gagcgcttcg aattgtttgt tggcgccgcg
     1981 gtgctcgcca acaatctcat gaagatcagc gagctgttga tcaaacgcgc caagcgccga
     2041 gccaaacgaa ccaacagata attccatccg cagatctgga cagcggcgaa ataaaaccgt
     2101 cgctcgcaca ggcgcgccca gcgctgcggc caatcccgcg cgccgccagc atacgccaaa
     2161 aaacacgcaa aaaacggcgg caaatcccgc cgtcggccct gaacttatgc ccaattcatc
     2221 gggacaactg acctgtgatc ctccaaattg accaattttg cgacagaaac tagactagca
     2281 agtcgaacca ttcgagcacg ttgccgatcg tggcggcgac ga
//
LOCUS       DATILV010000724         6261 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3245908, whole genome shotgun sequence.
ACCESSION   DATILV010000724 DATILV010000000
VERSION     DATILV010000724.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6261)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6261)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6261
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3245908"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..350
                     /locus_tag="VLJ17_17125"
     CDS             <1..350
                     /locus_tag="VLJ17_17125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018900366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HSV24739.1"
                     /translation="RFRDYHLLPDEPADQIFATTDDIAKRVRKVGGTTVRSIGHIGRL
                     QRILDNDADFVTPDDMLVELRDDNKQLTMRLRETHDLCDEHRDVASASLIENWIDEAE
                     RRTWFLFESTRRG"
     gene            718..1413
                     /locus_tag="VLJ17_17130"
     CDS             718..1413
                     /locus_tag="VLJ17_17130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014766251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1614 domain-containing protein"
                     /protein_id="HSV24740.1"
                     /translation="MRQMHYLPLAWPFFAILVGLFLIVVVLIQIKVLRYAYARLGVSS
                     GTALVLLLGSLIGSYINIPVWEFPEREVQSGREVIFFGMRYVVPVVVEWPGTVIAVNV
                     GGAVIPTLLSLYLMVKNNLWIRGALTAAVVTVIVHMLAYPVAGVGIAVPIFVPPVATA
                     IVAVLIARQHAAALAYVGGSLGTLIGADLLNLEAVRGLGAPVASIGGAGTFDGIFLTG
                     IMAVLLASFSRNA"
     gene            complement(1514..2233)
                     /locus_tag="VLJ17_17135"
     CDS             complement(1514..2233)
                     /locus_tag="VLJ17_17135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012591988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018784 - (S)-2-haloacid dehalogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006805 - xenobiotic metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="haloacid dehalogenase type II"
                     /protein_id="HSV24741.1"
                     /translation="MPEAPLTSVKALFFDVFGTLVDWRASIAREAKAVLEPLGHQTDW
                     LGFADAWRDEYQPGMEEVRAGRIPFSKLDVLHRRNLERILPRFGFTGLSKEVIAHLNR
                     AWHRLDAWADVAPGLHQLKSKFLLAPVSNGNISLMVDLARRNGFPWDAILGAEIAGDY
                     KPKPGVYLASAAALDLAPSACMMVAAHSNDLNHAAACGLRTAHIARPNEKGPGRGEAT
                     PSAPVDVAAGSLVELADRLAT"
     gene            complement(2238..3209)
                     /locus_tag="VLJ17_17140"
     CDS             complement(2238..3209)
                     /locus_tag="VLJ17_17140"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV24742.1"
                     /translation="MVARILARLLAAAFFSAAVLAPLPSARAEDLLKVAVAQRGQWDT
                     AITELGERSGIFKQRGIAVEVLYTQGGPEAHQAVISGSMDIACGGGIESAIGGFSKGA
                     PVRIIGSAMIGSPDTYWFVVANSPIKSLADASGKTISYSQNGSSSHTALLALLDQHKV
                     DARPVSTGGHPATLTMAMTGQIDIGRGAAPFGLDLVDEGKIRVIARGSEIKARADQTV
                     RICMANAQVLEKRGDAVARFMQGYRDAIDWMYSDPAALGMYEAFSNVRHELMARVRDQ
                     YFPKATLWPDEIRGLDPVLSDALKNKFITRPLTATEVKEMIQIPAPK"
     gene            3473..4432
                     /locus_tag="VLJ17_17145"
     CDS             3473..4432
                     /locus_tag="VLJ17_17145"
                     /inference="COORDINATES: protein motif:HMM:NF024799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HSV24743.1"
                     /translation="MKCPIPALIALAIAAVVQPHDASAESIAVFTKNTTNPFSKAIRL
                     GTDVAGKKLSVDVSHYVPTTADNVAEQTKLVDDAIAKKPDIIVFDPVENQKMVPAIEK
                     MNAANIPVIEITDRAEGGNFVSAVLPDDYQIGLTTARRLFKALDGKGNVVILEGIPTT
                     TSSIERVKGFNDALKEAPAVKLLASKSGGYQRKPAQDLMEGWIRQFPQIEGVLAANDS
                     MAAAAVETLEKRNRKAVVVGINGSKEAIDLIKADKMLASGEFNGFIIGCLATEIAARN
                     LRKQPVPKELVLKPAVYDKTNLQQYEARTEMRECPLLEDEMKN"
     gene            4829..>6261
                     /locus_tag="VLJ17_17150"
     CDS             4829..>6261
                     /locus_tag="VLJ17_17150"
                     /inference="COORDINATES: protein motif:HMM:NF044287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24744.1"
                     /translation="MARLFISYEREEQSYGFAVRQWLIDAQSWQAADIFVDVEHLRAG
                     QGAERKLLAEAEAAEAMLFLASDQSLDIRSFCHRELQHANGQILVVTIKGVEPDDERL
                     WRAVPHRARSRRITTLDKEPTEPFRFVSPITNAAGSAQLNAGEVGSIGRILRDLGIAP
                     SSYSWTPTEAGPYPGLRPLMEGEEALLFGRDIEIRDGLRALEMLRDSVSKRALVIQAP
                     SGAGKSSLLRAGLWPRLCNHSGFTPLGIVRAPKGVVHNPEWGLVTALTAPRPNHLKLA
                     RDEIEARVRNDLPALLAEIADNDRAEGGRRTLLLGLDQAEEMTALSTAEDFELDGLLA
                     CLLALPNDLDLRLLLTARDDSVDAALGRLARAGLPHEHVATLRLDRLPATRFRDIVAG
                     PAEVARRAGWPLCVDVKLADALAAAAGGSVSEIGDALPILALALHRMVARRRAPDGRI
                     TLKPEEARGFIETAVEAAAEEAVRNAGA"
BASE COUNT         1157 a         1967 c         1958 g         1179 t
ORIGIN      
        1 cacgtttccg cgactatcat cttcttccgg acgagccggc cgaccagatc ttcgcgacaa
       61 cggacgatat cgccaagcgt gttcgcaagg tcggcggcac gacggtgcgc tcgatcggcc
      121 acataggtcg cctgcagcgt atcctcgaca acgacgccga tttcgtcacc ccggatgaca
      181 tgctcgtcga gctgcgcgac gacaacaagc agctgacgat gcgccttcgc gagacgcatg
      241 acctgtgcga cgaacatcgc gatgtagcga gcgcgagctt gatcgagaac tggattgatg
      301 aggccgagcg tcgcacgtgg tttctgttcg agtccacccg gcgcggctga accgcgcggc
      361 ggcgctcctg cgccaagcgg tgggccctgg tcctgcggcc gctgccttcg tgagattacg
      421 cgcctcggcc gcctttgctc gcgcatctgc aaggcttgtg tcgggaaacg gccccagacc
      481 catttggcac gtccgccagc ggcagcaatg atttgctaat ccgaccagcg ctgtccgtgg
      541 taacctgaag gtgcaacccg tcaccgtcgc agtgcatgcc cggcttggcc gttccctacc
      601 cccgtttcta cccacgctgc agccacaaat tgcggcgaat gcaagcggat gccgtggcca
      661 gtcgacaact aaaaggacaa cggcatattt aattgcggcg attaggagcg aatctttatg
      721 cgtcagatgc actatcttcc cctcgcgtgg ccattcttcg ccatcctggt gggcctattc
      781 ctcattgtcg tcgtcctcat ccagatcaaa gtgctgcgct acgcctatgc gcgcctcggc
      841 gtcagctcgg gtacggcctt ggtgctgctg ttgggctcgc tgatcggcag ctacatcaat
      901 attccggtgt gggaattccc ggagcgcgag gtgcagtccg ggcgcgaggt catcttcttc
      961 ggtatgcgct atgtggtgcc ggtggtggtt gaatggcccg gtaccgtcat cgcggtgaat
     1021 gttggcggcg ccgtgatccc gacgctgctg tcgctctatc tgatggtcaa gaacaacctg
     1081 tggattcgcg gagccctaac agctgccgtc gtgaccgtga ttgttcacat gctggcctat
     1141 ccggtggcgg gggtcggcat cgcggtgccg atttttgtgc cgccagtggc gactgccatc
     1201 gtggcggtgt tgattgcacg ccagcatgcg gctgcgctcg cctatgtggg cggcagcctc
     1261 ggcacgctga tcggcgccga tctgctcaat ctcgaggccg tgcggggact tggcgcaccg
     1321 gtcgcctcga tcggcggagc cggaacattc gacggcatct tcctcaccgg catcatggcg
     1381 gtgctgctgg caagcttctc ccggaacgcg tagcccggtt ggagggagcg agggcgcatt
     1441 gcatcttgtg gcgaggcggc cctcggattg cgctgggctc cgcccgggct acgggcacgg
     1501 ttgcctttgt cgctcacgtc gcaagccggt ctgcaagctc cacgagactt ccggccgcga
     1561 catccaccgg cgccgacggc gtggcctcac ccctgccggg gcctttctca ttcggtcgcg
     1621 cgatatgtgc ggttcgaagc ccgcaagctg ccgcgtgatt gagatcgttg ctgtgtgccg
     1681 ctaccatcat gcaggcgctt ggagcgagat cgagggccgc ggcggacgcg agatagactc
     1741 ccggcttcgg cttgtaatca ccggcgatct cggcgccgag aatggcgtcc caaggaaaac
     1801 cgttgcggcg ggcaagatcc accatgagcg agatgttgcc gttggaaacc ggtgccagca
     1861 gaaatttgct cttgagttgg tgcaggcctg gcgcgacgtc agcccacgcg tccaatcgat
     1921 gccaggcgcg gttaaggtgg gctatcacct ccttggagag accggtaaat ccgaagcgcg
     1981 gcagaatgcg ctcgagattg cgccgatgga gcacgtcgag cttggaaaat ggaatgcgcc
     2041 ccgcccgaac ctcctccatc ccgggctggt attcatcgcg ccaagcatcc gcgaagccca
     2101 gccagtcggt ctgatgtccg agcggttcca gcactgcctt ggcctcccgc gcaatgctgg
     2161 cacgccaatc aacaagcgtg ccgaacacat cgaagaacag ggccttgacg gaggtgagtg
     2221 gggcttcggg catgtgatca cttcggtgcc ggaatctgaa tcatctcctt gacctccgtc
     2281 gccgtaagcg gccgcgtgat gaacttgttc ttgagtgcat ccgatagtac gggatcgagt
     2341 ccgcgaattt catccggcca tagcgtcgct ttgggaaaat actggtcgcg aacccgcgcc
     2401 atcaactcat ggcgcacatt ggagaacgcc tcgtacatac ccaacgcggc cgggtcggaa
     2461 tacatccagt cgatggcatc acggtagccc tgcatgaaac gcgcaacggc gtcgccgcgt
     2521 ttttccaaca cttgggcatt cgccatgcag atgcgcaccg tctggtcggc acgcgccttg
     2581 atttcgctgc cgcgggcgat cacccggatt ttgccttcgt cgacgaggtc gaggccgaac
     2641 ggcgccgcgc cgcggccgat gtcgatctgg cccgtcatcg ccatcgtcaa ggtggcggga
     2701 tgcccgccgg tggagaccgg ccgcgcgtcg accttgtgct ggtcaaggag cgccagcagc
     2761 gcggtgtggc tcgacgagcc attctgggaa tagctgatgg tcttgccgga ggcgtcggcg
     2821 agcgacttga tcggcgaatt cgcaaccaca aaccagtagg tatccggcga gccgatcatg
     2881 gcgctgccga tgatgcgcac cggcgcgccc ttggaaaagc cgccaatcgc ggactcgatg
     2941 ccgcccccgc aggcgatgtc catgctgcca gaaatcaccg cctggtgcgc ctcggggccg
     3001 ccctgggtgt agaggacctc taccgcgatg ccgcgttgct tgaaaatgcc ggagcgctcg
     3061 ccgagctcgg tgatggcggt gtcccattgg cctcgctgcg ccaccgccac cttcagcagg
     3121 tcctcggcgc gagcggatgg gagtggcgca agcacggcgg cggaaaaaaa cgccgccgcg
     3181 agcagtctgg ccaagatacg agccaccatg gggttctcct tggtccggtg tcttcctcgt
     3241 ccggttgacc gcaagtctag agcgccatta actgaaatgg aatcatggca aggccgttgt
     3301 ttttgccttc ttccccgccg aaaaggtcgg gacaaggggc tctttccaca agctcggact
     3361 cgccgttttg accaggagac gctccaacgc atcctgcgac gaaatgcgtc cccattccag
     3421 gcgtatgttc gagtgatatg ctatgaggat tccgtaccaa gggagcgaaa ccatgaaatg
     3481 tccaattccg gcactgattg cattggcgat agcggcggtt gttcagccgc atgacgcaag
     3541 cgcggaatcg attgcggttt ttaccaagaa cacgaccaac ccgttctcca aggcaatccg
     3601 gcttggcacc gacgtcgcag gcaagaagct gtcggtcgac gtctcgcatt acgtgccgac
     3661 cacggcggac aatgtcgccg agcagaccaa gctggttgac gatgccatcg caaagaagcc
     3721 ggacatcatc gtatttgatc cggtcgaaaa ccagaaaatg gtgcccgcga tcgagaaaat
     3781 gaatgccgcc aacattccgg tgatcgaaat taccgaccgc gccgagggcg gcaatttcgt
     3841 ctccgccgtg ctgccggacg attaccagat cggcctcacg accgcgcgcc gcctgttcaa
     3901 ggcgctggat ggcaagggca acgtggtcat ccttgaaggc atccccacca cgacgagcag
     3961 catcgaacgg gtcaagggct tcaacgatgc gctcaaagaa gcgccggccg tgaagctgtt
     4021 ggcatcgaag tccggcggtt atcagcgcaa gccggcccag gatctgatgg aaggctggat
     4081 caggcagttt ccccagatcg aaggtgtgct cgcggccaac gactctatgg cggccgccgc
     4141 tgtcgagacc cttgaaaagc gtaatcgcaa ggcggtggtg gtcgggatca acggcagcaa
     4201 ggaagcgatc gacctcatca aggccgacaa gatgctggcc agtggggaat tcaacggttt
     4261 catcatcggc tgcctggcca ctgaaatcgc ggcgcgaaac ctgcgcaagc agccggtgcc
     4321 caaggagctg gtcttaaaac ccgcggtcta cgacaagacc aaccttcagc aatacgaggc
     4381 gcgcaccgag atgcgcgaat gcccgcttct ggaagacgag atgaagaact gacgacttaa
     4441 tttctgcccc tcagccgcct tcgcgagtgc aggcttcgtg ggtcgctcgc gaagccaatt
     4501 tcgttctgat ggtatcacgc gacgggtgtc atcgcccgcg aagcttgtcc ccgcgaagat
     4561 ggagagcggg cgacatagta atcaaggcaa cgctgcgggg tactggattc tcgctttcgc
     4621 gagaatgacg ccgaaaaatt gcacgaagct gttccatttc accgaaaccc gcgttagtaa
     4681 cttgtttcca tgaaacctgt gtaggacggg ttcctttacc aagcatctct cgtagaatgg
     4741 cgggttcaag agaaccgccc tactgccgcc gatatgatct tttaaagcga ctactcttcg
     4801 agccgttggc gattggtgcg aggcttcctt ggcgcgtcta ttcatttcat acgagcgcga
     4861 agagcagagc tatggcttcg cggtccggca gtggctgatc gacgcgcaaa gctggcaagc
     4921 agccgatatt ttcgtcgacg ttgagcattt gcgcgcgggg cagggggcgg aaagaaagct
     4981 tctcgccgaa gccgaagccg ccgaggcgat gctgttcctg gcctccgatc aatcgctcga
     5041 catccgctcc ttctgccacc gcgaactgca gcacgcgaac ggccagattc tcgtcgtgac
     5101 catcaagggg gtcgaacccg acgacgagcg tctctggcgc gccgtcccgc atcgtgcgag
     5161 gtcccgccgg atcacgacgc tcgacaagga gccgacggaa ccgttccggt tcgtctcgcc
     5221 gatcaccaac gccgccggca gcgcgcagct caatgccggg gaggtcggga gcatcggccg
     5281 gatcttgcgt gacctcggca ttgcccccag cagttactcc tggacgccca ctgaagccgg
     5341 cccctatccc ggcctccgcc cgctgatgga gggcgaggag gcgctgctgt tcggccgcga
     5401 catcgaaatt cgcgatgggc tcagggctct tgagatgctg cgcgacagtg tctccaagcg
     5461 cgccctcgtt atccaggcgc cgtcgggcgc tggcaaatcc tcgctgctgc gggccggcct
     5521 gtggccgcgg ttgtgcaatc actccggctt cacgccgctc ggcattgtgc gcgcccccaa
     5581 gggcgtcgtg cacaatccgg aatgggggct cgtaacggcg ctcaccgcgc cgcgcccgaa
     5641 ccatctgaaa ctcgcgcgcg atgagattga agcccgcgtc cgcaacgacc tccccgccct
     5701 gctggccgag atcgctgaca acgaccgtgc cgagggcgga cggcgtacgc tacttctcgg
     5761 cctcgaccag gccgaggaga tgacggcgct gtcgacggcc gaagatttcg agctcgacgg
     5821 tctgcttgcc tgtctgctcg cgttaccgaa tgacctcgac ctgcgcctgc tgctgaccgc
     5881 gcgcgacgac agcgtggacg ccgcgctcgg ccggcttgcg cgcgctggcc tgccgcacga
     5941 acatgtcgcc accctccggc ttgaccgcct gcccgccacc cgctttcgcg acatcgttgc
     6001 tggcccagcg gaagtggcgc ggcgcgcggg ttggccgctt tgtgtcgacg tcaaacttgc
     6061 cgatgcactt gcagccgctg ccggcggcag cgtctccgag atcggcgatg cgctgccgat
     6121 cctggcgctc gctctccacc gcatggtggc aagacggcgc gcgccagacg gccgcatcac
     6181 cttgaagccg gaggaagcgc gcggcttcat cgaaacggcc gtagaggcgg cagcagagga
     6241 ggccgttagg aacgcagggg c
//
LOCUS       DATILV010000725         2012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1709929, whole genome shotgun sequence.
ACCESSION   DATILV010000725 DATILV010000000
VERSION     DATILV010000725.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2012
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1709929"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(210..389)
                     /locus_tag="VLJ17_17155"
     CDS             complement(210..389)
                     /locus_tag="VLJ17_17155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24745.1"
                     /translation="MSLPEDRPAFFRRNAAECARMARISTTSKVRDSYKELQRHWQEL
                     AEHAERVVNRGKAED"
     gene            complement(876..1079)
                     /locus_tag="VLJ17_17160"
     CDS             complement(876..1079)
                     /locus_tag="VLJ17_17160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24746.1"
                     /translation="MEHTAAVKIVAIGTAFAFRGALFVDAMNHPTLPVGLTAPTWGIT
                     AGSTVSSINLNMQIVAPVIWRNA"
     gene            1233..1745
                     /locus_tag="VLJ17_17165"
     CDS             1233..1745
                     /locus_tag="VLJ17_17165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24747.1"
                     /translation="MALDLSLPQFLTDDVVSMTGIKSATIDYWVKLGHIELDARPRNW
                     DTGICSASDVLKICGAAELRRAGLAVSDHTADLADAIARQCRLWYHQKHGKHWDGASP
                     EVRNHGRLLIITIDTNGRQHASPVGRTNEPADPQNGRFVIDCFALAERVMPRMMAIAE
                     VRKDRSAAAE"
BASE COUNT          398 a          576 c          622 g          416 t
ORIGIN      
        1 gccagtcgta aagtctttca aacggagcaa tccaatggcc gctcggctga caaccggcca
       61 ttctgcttag acccaccgac tccggtggac gcgcgacggc ttggacggcg gagccgcggg
      121 cgacggagcg gtaaccggca acgccgcggc catgcgttcg gctgcgggta tcggctgccg
      181 acgagcagcg cgccatcgat tagagagact cagtcctccg ccttgcctcg gttgaccacg
      241 cgttcggcgt gttccgccag ttcctgccaa tggcgttgca gttccttgta actgtcccgc
      301 actttggaag ttgtgctgat cctcgccatg cgtgcgcatt cggcggcgtt ccgtcggaag
      361 aaggcagggc gatcttcggg caggctcatt tgcgatctat gtcaaattga tgtgcatttt
      421 acactacagc ttccacgatt cgtgtacagt aaacttaata ccatgcagct cgcatgatga
      481 cccccgtcgt tgtgcgggtt agggccgtcc gggttgggca acaacccgaa cggcccgacg
      541 ttcggccagt cgcgctcact tgaacgccgg cggcttgtgc gatgaacggg tcgttatagt
      601 tggccgcgtg gcatcgccgc acacgggcaa tcacaggatt gggcgcgacg attacgatgt
      661 gctggatgct ggcagggtgg tcggtcgcat ctatgaaccg tgcgcgccgg cccacaaggt
      721 ggcttggctc tggtcgatct tctatcgtga ttggccggcc gtccaccaca gcgttggtgc
      781 agaaaagctg caaaacgcaa cacgaccgca tctcgctcgg tttggtcaaa cagcaacgcg
      841 acgcccaggg aacgtatggt taggaccgat gcgctctaag cgttccgcca tatcacgggg
      901 gcgacgatct gcatgttgag attgatggag gacacggtcg acccggctgt tattccccac
      961 gtaggcgcgg tcaaacctac tggcagcgtg ggatggttca tggcgtcaac gaaaagggcg
     1021 cctcggaacg cgaacgcggt gccgatggca acaatcttca ctgcagccgt atgttccatc
     1081 gagcaatctc ccgggatctt cggcaaataa tggcggcgcg ctcgctgcgc aagagagggt
     1141 atggcggcga tcgacgcggt gcatcacact aggcgcaacg ggtcggccga aggggtgaac
     1201 ctgcagtcgc tgtaacactc agaggttgcc gcatggcatt ggacctgagc cttccgcaat
     1261 tcttgactga cgatgttgtg agcatgaccg gcatcaagtc agcgaccatc gactattggg
     1321 tgaaactggg acacatcgag cttgatgccc gaccgcgcaa ctgggacacg ggcatctgca
     1381 gcgcgagcga cgtgttgaag atttgtgggg cggccgaatt gcgacgcgcg ggccttgccg
     1441 tttctgatca cacagccgac ctcgccgacg caatcgcccg tcaatgtcgc ctttggtatc
     1501 accagaagca tggcaagcat tgggacggag cttcgcccga agttcggaat catggccggt
     1561 tactgatcat tacgatcgat accaatggcc gccaacacgc gtcgcctgtc ggccgcacta
     1621 acgagccggc ggaccctcag aacggccgtt tcgtcatcga ttgcttcgcg ctcgctgagc
     1681 gggtcatgcc gcggatgatg gcgatcgctg aggtgaggaa agaccgctcg gcagccgccg
     1741 aatagggggg ctttggtgga gggttcgcca gccgctcctt gattattggc gttgagctac
     1801 cggtcgcttt tgcttctgcg gattgcgtaa tttcaaattc ttcaatcgcc ttcttgatcg
     1861 cagatactgc gtcgggctcc tcgggctgcc gatcggcgtg gccggcgtca cgcgaaggag
     1921 aaaaacgttc cagcggtatt ccttcttgcc catagaaatg cgtctcaatc gatctgacga
     1981 aaacaatttc acgacagatg gaagacgagc ga
//
LOCUS       DATILV010000726         3750 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2986425, whole genome shotgun sequence.
ACCESSION   DATILV010000726 DATILV010000000
VERSION     DATILV010000726.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3750
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2986425"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1151..2221
                     /locus_tag="VLJ17_17170"
     CDS             1151..2221
                     /locus_tag="VLJ17_17170"
                     /EC_number="3.4.22.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008234 - cysteine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="caspase family protein"
                     /protein_id="HSV24748.1"
                     /translation="MDALADRRVALVIGNGVYTKAPHLPNAQHDARDVAAALKRIDFD
                     VIQGTDLDRARMQDAIVRFARAAQSADVGLFYYSGHAMQFKGVNYLMPVDAKLDDEAD
                     LYRFTKVDDVLGYLQQAKALKILVLDSCRDNPLAETLKRSIGLTRAASLPRGLARIEA
                     PIGTIISYATQAGQTAVDGTGRNSPYSTAFLKHIEEPNEIGDIFREISADVYRATGRT
                     QLPELSLSITDKFYLKGPVPAIAHLPPQPMTVDLSMVVTPPLPPARPPSAPAAGLVSV
                     TVTPLPQPTTIDPSVVVLPLPRPKPSRAQEVALAAANASRHVRNSTIRAHRHRPLSPL
                     ELILAPTPRPPARSPAEHSKAP"
     gene            2489..2722
                     /locus_tag="VLJ17_17175"
     CDS             2489..2722
                     /locus_tag="VLJ17_17175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24749.1"
                     /translation="MPIYFVVENLDKSRGHYRAGTGKILQLIREVYVDADDDIDAPVL
                     KHAVRIARYLYPKAYLSRQAPSHGRPRAMAACC"
     gene            2804..3085
                     /locus_tag="VLJ17_17180"
     CDS             2804..3085
                     /locus_tag="VLJ17_17180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24750.1"
                     /translation="MIDDGMGEFRVEVSSIRQRFLEAFRLRSERAVSITMPHATPVLH
                     VDAVRIADRDANLPDSSQALFNQALVAGVKRLVTTDEQRRWLLGVECGP"
     gene            complement(3330..3674)
                     /locus_tag="VLJ17_17185"
     CDS             complement(3330..3674)
                     /locus_tag="VLJ17_17185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24751.1"
                     /translation="MTKRKHSRLTPKEARSLIRRIRARPSKLTIGGAPIGNDDGVLVD
                     AALALRYLTTELRGLRKKVELAAATTTDPTTASRLRAALSVGAQLTSPPRVLPRTMLD
                     AGMVERKELRHV"
BASE COUNT          764 a         1110 c         1036 g          840 t
ORIGIN      
        1 aggctggccg ggggaaaaac gccggctatg cgggctcaaa tcttgtcgtc ttctcgccct
       61 cgtccgctag tctcatataa ttggatcggg cggtttgtcc ggcgcgcagc gaaggtgtgg
      121 gatggcattt tctgctgacc aatcaagcca gaacaggctt cccatctcac cgatcggcgc
      181 accatttctg gcgggcgcat cccgggttct ggcgggcgca tcccggggtg cccgcgacgc
      241 atcgctcaag accacggctg tttgatgaag gtcggaaggc gaaccgcacc gtatcgctca
      301 agggcatcga tggcctttat ttaacgacaa tgctgccgcc atcgttgcgc gatcgactca
      361 cacaatattt attatgtttc cgagtgccga cgacgatcaa aatgttaaca acatacattt
      421 agctgatggt tagcagctct tggaacgcca gacgataacg attggtcggt aatgaatgac
      481 tattataact tactgaggcc gctcactgcg gcagttattg attacatcaa tgatccaggg
      541 catccaacac gtattggtga cagggcacag tctcggcgca gctatggcgc agcaatttca
      601 tgagcgttgc cgactcaaga tgtgagccgt cacctttgca aatccaggag tgaacgatcc
      661 tcttttcatt ggctcacggc agcctgattc tctgactttg aatatgttga tcgatggcga
      721 tccaatagca aacgtgtttg attttgataa acttcgaaga gacagttatg taatacatca
      781 cattggggac ataaaagacg cagatcttca ccacatagcg ctttatgatc gcaatcgccg
      841 catcggatga cgcactgaat tctgcgtcag cgcgcgaatc cagccggatc gaattttcgg
      901 gaaccacagg cgcaatcgtg accgtgcgtc gaaatgttta tgacttggca atgtccgaaa
      961 tgggttaatc gcgccgtttt ctttgcatcc acccccatgt ctgcctctgt tggtagccat
     1021 cgtagcagcc agattgttga attctagaag gccacctgct atcggtttcg tcgatgacat
     1081 caccaactga gggcatatgc gctggctgag cagtctcgct cttgggttgg ttctctggtg
     1141 cgtgaccgag gtggatgcct tggccgatag acgggttgcg ctcgtcatcg gcaatggcgt
     1201 gtacaccaag gcgccccatc tgcctaacgc ccaacatgat gctcgcgatg tggctgcggc
     1261 gctcaagcgc atcgatttcg atgttattca gggcaccgac ctcgaccgag cccgaatgca
     1321 ggatgccatc gtccgctttg cgcgcgctgc gcaatccgcc gacgtgggac tcttctatta
     1381 cagcggccac gccatgcagt tcaaaggcgt caattatttg atgccggttg atgcaaagct
     1441 cgatgacgag gcagaccttt accgatttac caaggttgac gacgtccttg gttatctcca
     1501 gcaggccaag gccctgaaga tactcgtgct cgattcgtgc cgcgacaatc cgctggcgga
     1561 gacgttgaag cgctcgatcg gtttgacgcg cgctgcatcg ctgccgcgtg ggctcgcaag
     1621 gatcgaggcc cccattggta caatcatctc ttatgccacc caggcagggc aaaccgcggt
     1681 cgatggaaca gggcgcaaca gcccctattc gacggcattc ctcaagcaca tcgaggaacc
     1741 caacgagatc ggggatattt tccgggaaat cagcgccgac gtctatcgtg cgaccggccg
     1801 gacgcagctc cccgaactgt cattgtcgat taccgacaag ttctatttga aaggtccggt
     1861 tcccgctatt gcacatctcc ccccacagcc gatgacggtc gatctctcaa tggttgttac
     1921 gccaccgtta ccgccagcga ggcctcccag tgcgcctgcc gcaggtctgg tgtctgttac
     1981 tgtaaccccc cttccgcagc ccacgacgat cgatccctca gtggtcgtgc tgccactacc
     2041 acgaccgaag ccttcccgtg cgcaagaggt ggcacttgct gcggctaacg cttctcgtca
     2101 cgttcgaaac tcgacgattc gcgcgcatcg acaccgccca ctttcgcccc tggaactcat
     2161 cttggcgccg acgccgcggc cgccagcgcg atcgcccgcg gagcacagca aagcaccatg
     2221 agcgcgatca gccaccgaat tgcgcgctct cgtcctgcat cgacgtcgag caattcctcc
     2281 acgtagcaaa tgggtacggc tttcgtcgcg atttgtttgc ctctggcgca atgttctgcg
     2341 gtcgatcggg gttccactag gccgcggcct tggggcattt gccgcgtatg actttctcgt
     2401 ccttcatgtt cctgaaagtt actattttct tgaatctttg gccgccaata cattactcat
     2461 gtgtacctga agtacgcaaa agttataaat gcccatctat tttgttgtcg agaacctcga
     2521 caagagccgc ggacactacc gcgcgggaac tggcaagatc ctccagttga ttcgggaggt
     2581 ctatgttgat gccgacgacg acatcgatgc acccgttctc aagcatgcag tgcgcattgc
     2641 gcggtatctc tacccgaagg cctatttgtc gcggcaagcg ccatcacacg ggcgcccacg
     2701 cgcgatggcc gcctgttgtt gagcggatgg cgtaagcagc gcacccgcat ccgtgctctc
     2761 gaaatcatcc agaacgcggc gccacccatc gcttggctcc gccgtgatcg acgacggcat
     2821 gggcgaattc cgcgtggaag tctcatcgat ccgccagcgc ttccttgaag ctttccgtct
     2881 gcgcagcgag cgtgccgtct cgatcacgat gccacacgcc acaccggtgc tgcacgtcga
     2941 cgccgtgcgt atcgcggacc gcgacgcaaa cttgcccgat tcgtcgcagg ccctcttcaa
     3001 tcaggcgttg gtggccggcg tgaaacgttt ggtaacgacc gatgaacagc gccgttggct
     3061 tcttggggtt gaatgcgggc cgtagcagca tcagcgctct ttcagcccaa tactgcggcg
     3121 cactaacgct gacacgcgaa acgctatacg gtaacagcgt taggctgcga tccggttgtc
     3181 aagcaaagat tgcacaacag acaagatacg cgttccgcga gaggagcaac atcttgtact
     3241 tgaagcgcaa ttgcgatcct gaccgcaccc cacgcccatc gagcgataga aacgtcactt
     3301 ggccttcgtg cgcttctgcg cggcaacagc tacacgtgtc gaagttcttt ccgttcgacc
     3361 attcctgcgt ccagcatcgt tctgggtaag acacgagggg gcgatgtcag ctgggcgccc
     3421 acactgagtg cggcgcgcaa gcggctcgcc gtcgtcgggt cggtggtggt tgctgccgcc
     3481 agttcaacct ttttgcgcag acctcgcaac tcggttgtca ggtaccgcag cgcgagggcg
     3541 gcatcgacga gcacgccatc gtcgttgccg ataggtgcgc cgccaatggt aagcttggag
     3601 gggcgggctc ttatccgacg gatgagagag cgcgcttcct taggggtcaa tctggagtgt
     3661 ttgcgcttgg tcattgtgtt cagtcttcct gttcggcgac ctgagccaac tcacgaagca
     3721 accgggcatg ccggcgcagc ctgtgggaac
//
LOCUS       DATILV010000727         2943 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_172273, whole genome shotgun sequence.
ACCESSION   DATILV010000727 DATILV010000000
VERSION     DATILV010000727.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2943)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2943)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2943
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_172273"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..788
                     /locus_tag="VLJ17_17190"
     CDS             <1..788
                     /locus_tag="VLJ17_17190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24752.1"
                     /translation="VDSQAWDDSRYPDFSGQWRPIGGPGRFDSSKPAGRGQQAPLTPE
                     YQAIFEINLKDQAQGGQGTTSTYRCISPGMPRVTNGYGEIEFVVTPNTTHILIRHIDD
                     DRRIFTDGRPWPDDLDPTFLGYSIGQWIDTDGDGRYDVLQVETRGPFKGPRAFDGSGL
                     PLHADNQTVVKERIYIDEDDPNVAHDEVTVIDHALTRPWTVMKNYRRNPNPRPRWTEE
                     NCSENNHIAVGKEDYMLSSDGFLMPTKKDQAPPDLRYFKQTRK"
     gene            complement(1427..2257)
                     /locus_tag="VLJ17_17195"
     CDS             complement(1427..2257)
                     /locus_tag="VLJ17_17195"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HSV24753.1"
                     /translation="MPPTSASEPHVLDRPWRIWASIVVFGIVLSGVILGVLIIPVIQG
                     RSEGIDAYTAICRALGVLPGSPARQQVSDRTPPTPVSQVVWTPDVLQILADARPERGR
                     AKVLEVCVACHGEQGVSVAPEYPHLAGQSGAAIYKQLSDYRTGSRTHESMTIIAKDLD
                     EPTLADVAAYYAAQPKRNPNPATLAESPPAIVRLVELGDPSRNIPPCAACHRPGSGGP
                     IETPILSEQGQDYIVLQLKMYASGERRNDVYGRMRAIASRLTQTEINGLAAYYRAGFR
                     "
     gene            complement(2267..>2943)
                     /locus_tag="VLJ17_17200"
     CDS             complement(2267..>2943)
                     /locus_tag="VLJ17_17200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013948332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HSV24754.1"
                     /translation="FGWITALPWQRPTVLAAGLAFVMLGFGGFGGIINMGYGVNAMVH
                     NTSWVTAHFHLIFGGSVVIMYFAIAYEIWPSLTGHDHASSAPLRMQLWLWFLGMMVMT
                     LPWHWLGLQGQWRRIANFNYADPIISGWGPLVIVSLGGGLVLLASALLFVRNLVILHG
                     GPLPALQRPLYALAVHPPQRVPAALNGFGLWNVLVLILMLLAYGYPIAQFVITPSPGA
                     MVHRVH"
BASE COUNT          674 a          897 c          855 g          517 t
ORIGIN      
        1 ctgttgattc tcaggcgtgg gacgactcga ggtatcctga ttttagcggg cagtggcgcc
       61 cgatcggcgg ccccggacga tttgatagca gcaagcccgc gggccgaggc cagcaggcac
      121 cgctgacccc cgagtaccag gcgatcttcg agatcaacct caaggatcaa gcccaaggcg
      181 gacagggcac gacttcgacc tataggtgca tctcacccgg catgcctcgt gtcaccaacg
      241 gatacggcga gatcgaattt gtcgtgaccc ccaatacaac tcacattctc atccggcaca
      301 tcgatgacga ccgccgcatc tttaccgacg ggcgcccttg gcctgacgac ctcgatccga
      361 cttttcttgg ctattcgatc ggtcaatgga tcgatacgga tggcgacggc cgctacgatg
      421 tgcttcaggt cgagacgcgg ggacctttca agggcccccg cgcattcgac ggcagcggcc
      481 tgccgctgca cgcggacaat cagactgttg tcaaagaacg gatttacatc gacgaggatg
      541 atcccaatgt ggcccatgac gaagtcacgg tgatcgacca cgctttgacg cggccctgga
      601 cggtgatgaa gaactatcgg cgcaatccca atccccggcc gcgatggacc gaggaaaatt
      661 gcagcgagaa caatcatatc gccgtcggca aagaagacta catgcttagc tcggatggat
      721 tcctgatgcc caccaagaag gaccaagcgc cgccagattt gagatatttc aagcaaactc
      781 gaaagtgaca tgcgagccgc aatccctgta agcggcccct caaactccga gccaattcag
      841 gccgccgggc aggttgccga ttgcaaaatc ggcctgcaag actctccggc gggcagattc
      901 gagtgcggct ttggatgaat gtaagatcgg cgtcgcatag agccaatgtc accggcgtcg
      961 atcagaaaca gtggttgcct gcacaggatc aaggtgtgca gcatcaccat gccggccagc
     1021 acatcgaaag gcgccgcgac gtgaagcacg ccgttcttga cggtccaggg accgaagccg
     1081 tcgacctcga tgcgctccgg actgctatgc tacgatcttg atgccatccg agcgaccaat
     1141 ttccgcctgg cgtttgtcaa gcaggatcgc tctcaccccg acatgcgtcg cctagaacgg
     1201 agcatgcgac cgcatcccac cgttcccaag aaggtcacaa aaggtcggag tgcggccaat
     1261 gtcgtgcacc ctcacaccgg ctgcagcagc ggcagataag cgaccgcact ccgtatgccc
     1321 tgcagctcgg tcgcactcat ggcggaggga atacattggg cgccaagaac gtcattactt
     1381 gcggatgtca ccaccgacga acagtgttga cccggcaaat gcgaagctat ctgaaaccgg
     1441 cccgataata ggccgcaagt ccattgatct cggtctgcgt aagcctcgag gcgatcgctc
     1501 tcatgcggcc atagacatcg ttgcgtcgct cgccagaggc atacatcttc aactgcagga
     1561 caatataatc ctgcccttgc tcggacagta tgggggtctc aattggaccg ccagagccgg
     1621 gccgatgaca tgctgcgcag ggtggaatat tgcggcttgg atcgccaagt tcgaccagac
     1681 gcacgatcgc cgggggcgat tcggcgagcg tcgctggatt tggattgcgc tttggttgag
     1741 ccgcgtaata cgccgcaaca tcggccagcg tgggttcatc cagatccttc gcgatgatcg
     1801 tcatcgactc atgtgttcga ctgcctgttc tatagtcact cagctgcttg taaattgccg
     1861 cgcccgactg accggcaagg tgcggatact caggtgctac ggaaactccc tgctcgccat
     1921 ggcaagcgac gcacacttcc agcaccttgg cacgaccccg ttccggtctg gcgtcggcga
     1981 gaatttgcaa tacgtctggc gtccaaacca cctgtgaaac cggcgtcggc ggcgtgcggt
     2041 cagaaacctg ctgcctcgcg ggtgatccag gcaaaacgcc aagcgcccgg cagatcgccg
     2101 tgtaggcgtc gattccctcg ctccttccct gaatgaccgg gatgatcagc acccccagaa
     2161 taaccccgct cagcacgatg ccgaaaacga caatacttgc ccaaattcgc catggccgat
     2221 cgagaacgtg aggttcggaa gcggaggttg gcggcatcgc gcactcctaa tgcacccgat
     2281 gcaccatcgc gcccggcgac ggagtgatca cgaactgggc gattgggtac ccataagcta
     2341 gcagcatcag gataaggact aacacgttcc agagcccaaa gccgttgagc gccgcgggaa
     2401 cacgctgcgg cggatgcaca gccagcgcgt ataaggggcg ttgaagcgcc ggcaatgggc
     2461 cgccgtgaag gatgacgaga ttgcgcacaa acagcagcgc cgaggcgagc agcacgaggc
     2521 cgccgccgag cgaaacaatg acgagcggtc cccagccaga gatgatcgga tccgcatagt
     2581 tgaaattggc aatgcgccgc cattggccct gtaggcccaa ccagtgccat ggtagcgtca
     2641 tcaccatcat gccgagaaac cacagccaca gctgcatccg cagcggagcg gacgaggcgt
     2701 ggtcgtggcc ggtaaggctc ggccatatct cataggcgat cgcaaaatac atgatgacga
     2761 cggagccacc gaaaatcaga tgaaaatgcg ccgtgaccca cgaggtgttg tgcaccatgg
     2821 cgtttacgcc gtagcccatg ttgatgatcc caccgaaccc gccgaagccg agcatcacga
     2881 aggcgaggcc ggccgcgagt acggtgggcc gttgccacgg tagcgccgtg atccagccaa
     2941 aaa
//
LOCUS       DATILV010000728         2932 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_683527, whole genome shotgun sequence.
ACCESSION   DATILV010000728 DATILV010000000
VERSION     DATILV010000728.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2932)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2932)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2932
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_683527"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            332..1570
                     /locus_tag="VLJ17_17205"
     CDS             332..1570
                     /locus_tag="VLJ17_17205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV24755.1"
                     /translation="MQTASRNVLSIPRLAKNLSRLVAAFFMLACATAMLSGAPAMADG
                     IGPLSIAKVGNFFVGGKYVDTKDGPVLAGHAYVEYYIPTNRTHPYPIVMIEGCCPSGA
                     GYMGTPDGRDGWGQYFLSKGYAIYIVDQVGRGRSPYVEAVYGAKRARTPKQVERDFIA
                     YEKYNLYPQAKLHTQWPGSGTIGDPLFDQFMAQMLPGIEDSDVRETLNRDATIALLDK
                     IGPAIVMPHSQSASPTYLAADARPQLVKGLLMVEAGTASFYDVQLVGAPDWFKDGPLN
                     KSFGLTRAPLTYDPPAKGIADFALVRQEKPDGPDFARCWQQKEPARKLVNFRNIPTLL
                     MSAEASFGAPTAHCNAAYLKAAGVPVDFIRLADIGIRGNGHFLMLEKNNLEVAAVIAD
                     WLNKRVTPGETTAGDKTKGN"
     gene            complement(1732..2106)
                     /locus_tag="VLJ17_17210"
     CDS             complement(1732..2106)
                     /locus_tag="VLJ17_17210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24756.1"
                     /translation="MSIEIQFPRFDPQTCLAVNKQGHVIILEDVGNNPHVGKIWDYNP
                     AADTMTMIAQHDPDRFDPSAPVGGQPFLTQDEESSGVIDVTDILGSAGQNAYLLDVQA
                     HYPNGPELVEGGQLLLMHMDLV"
     gene            2339..>2932
                     /locus_tag="VLJ17_17215"
     CDS             2339..>2932
                     /locus_tag="VLJ17_17215"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV24757.1"
                     /translation="MKNKINSSWRFASILFVLTLAIAALDETQAAATRPLRIAYLFTS
                     GTMASMWMAKETGGFAKEGLDVEVISMSSVLALPALIANEVDVIQISAVPLINASLRG
                     FDAVFVAGMLNTMIWDLYARAEIKSAEQLKGKIVGTERPGSPVAYGTLVALRKLGLTP
                     KDVQLRILGGSEQITAALLTGQIVAGAAAPPVSFQLDR"
BASE COUNT          599 a          887 c          869 g          577 t
ORIGIN      
        1 aacattggga ttttcatcaa cagaaagacg attgacaact cgccgggctg gcgatatagc
       61 tccgatcaaa aaaaaggttg tttaaatttc ctatacgtat tcatgaggtc gagcttctac
      121 gatactcgcc caggccaacg acggcgacaa cccgccatct gtagcccgga tggagcgaag
      181 cgtaatccgg gacgctccat cgctctctct ccacgcggcc ccgcattcgc tgcgctcatg
      241 cgggctacaa ggtcattctg tcgcccgttg cttcttggtg cgcaaggtcc ataatccgcc
      301 aacttcaaag cccgggaaat ggagagatcc gatgcagacc gcctctcgca acgtcctgtc
      361 gatcccccgt ttggcgaaga acctcagccg cctcgtcgcg gcttttttca tgctcgcctg
      421 cgccacagcc atgctcagcg gcgctcccgc catggcggac ggcatcggcc cactgtcgat
      481 cgccaaggtg gggaacttct tcgtcggcgg caaatatgtc gacaccaaag acggtccggt
      541 gctcgccggc catgcctatg tcgaatacta catcccgacc aaccggacgc atccctaccc
      601 gatcgtgatg atcgaaggct gctgcccctc gggcgcgggc tacatgggca cccccgacgg
      661 ccgcgacggc tgggggcaat atttcctctc caagggctat gccatctaca tcgtggacca
      721 ggtcggccgc ggccgttcgc cttatgtcga ggcggtctac ggcgcgaagc gggcaagaac
      781 acccaagcag gtcgagcgcg atttcatcgc ctatgagaaa tacaacctgt atccgcaggc
      841 gaaattgcat acgcaatggc cgggctccgg cactatcggc gatccactgt tcgaccagtt
      901 catggcgcag atgctacccg gcatcgagga cagcgacgtg cgcgagacgc tcaaccgcga
      961 cgccaccatc gcgctgctcg acaagatcgg gccggcgatc gtgatgccgc attctcagtc
     1021 cgcctctccc acgtatctgg cggcggacgc gcggccgcaa ctggtgaagg gtctgctgat
     1081 ggtcgaggcg ggcaccgcct cgttctacga tgtccagctt gtcggcgcac cggactggtt
     1141 caaggacggt ccgctgaaca agtctttcgg tctcacacgc gccccgctta cgtacgatcc
     1201 gccggcgaaa ggcatcgcgg acttcgcact cgtgcgccag gaaaagccgg atgggcccga
     1261 cttcgcgcgc tgctggcagc agaaggaacc ggcgcgcaag ctggtcaact tcaggaacat
     1321 cccgacgctg ctgatgtccg cggaagcgtc cttcggcgcg ccgaccgcgc attgcaacgc
     1381 cgcctacctg aaagcggccg gcgtgccggt cgacttcatc cggctggccg acatcggcat
     1441 tcgcggcaac ggccatttcc tgatgctgga gaagaacaac ctggaggtcg ccgcggtcat
     1501 cgccgactgg ctgaacaaac gcgtgacgcc gggcgaaacg acagccggcg acaagaccaa
     1561 ggggaattga aaagaatgcg gatcgcttgc cgaaattgac ctccatgcgg ctcttgcccg
     1621 cttctgacac gaaccagttc gtgctgcacc aacacgcggg gatggcccgg cgcgaggcgc
     1681 cgggccatta tcgctcgaat gactatcggc gagagtcgtc cgcccagaac atcagaccag
     1741 gtccatatgc atgagcagca attggccgcc ttcgaccagt tcagggccgt tgggataatg
     1801 cgcctgcacg tcgaggaggt acgcattctg tcccgccgag ccgagaatat cggtcacatc
     1861 gatgaccccc gatgattcct cgtcttgggt aagaaatggc tgtccgccca ccggagcgga
     1921 tggatcgaac cggtccggat cgtgctgggc gatcatcgtc atcgtgtcgg ctgcggggtt
     1981 gtaatcccag atcttgccga cgtgcggatt gttgccgacg tcctccagaa tgatcacgtg
     2041 gccctgcttg ttgaccgcga ggcaggtctg agggtcaaat cttggaaatt gtatttcgat
     2101 gctcatcctc gaaaacggaa aaagaaaaac aggtcacttc tctccggaaa gggagcggtc
     2161 tgaatatcga ctttgtttct cgccgggtca cccgaatata tgaggaactg ccggggactc
     2221 tttctcgttg cgatcgaacg cagcgccgtg ataaatcgtg cccataccga gaatcccgcg
     2281 cgggcaacaa gcttgctatg tgtccacatt tctttcttag agccacgacg ttttcgcgat
     2341 gaagaacaag attaattctt cgtggcgttt tgcatcgatt ctcttcgtct tgacgcttgc
     2401 gatcgcggcg ctggacgaaa cgcaagcggc ggctacgcgg ccgttgcgga tcgcgtactt
     2461 atttacctcg gggaccatgg cgtcgatgtg gatggcgaag gagaccggcg gtttcgccaa
     2521 agagggattg gatgtcgagg ttatttccat gtcgtcggtt ctagcgttac cggcgctcat
     2581 cgcaaacgaa gtcgatgtaa tccaaatctc cgcggtgcca ttgatcaacg cgtcgctgcg
     2641 cggcttcgat gcggtctttg tcgcggggat gctcaacacg atgatttggg atttatacgc
     2701 cagggcggag atcaagagcg ccgaacaact gaaaggtaaa atcgtcggca cggagcggcc
     2761 gggcagcccg gtggcctacg gcacgctggt ggcgctgcgc aaattgggac tcacgcctaa
     2821 agatgttcag ctgcgaatat tgggcggcag cgagcagatc accgcggcgc tgctaacggg
     2881 ccagattgtc gccggcgcgg cggctccacc ggtgagtttc cagctcgacc ga
//
LOCUS       DATILV010000729         1537 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2733328, whole genome shotgun sequence.
ACCESSION   DATILV010000729 DATILV010000000
VERSION     DATILV010000729.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1537)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1537)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1537
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2733328"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            344..478
                     /locus_tag="VLJ17_17220"
     CDS             344..478
                     /locus_tag="VLJ17_17220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24758.1"
                     /translation="MWRDKERTEEARELLAPVYGQFTEGFETTDLKAAKPLVDYLRRL
                     "
     gene            678..1286
                     /locus_tag="VLJ17_17225"
     CDS             678..1286
                     /locus_tag="VLJ17_17225"
                     /inference="COORDINATES: protein motif:HMM:NF017319.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV24759.1"
                     /translation="MMRRSLLTVLLVLVATTSLAAAPPVNPADAIAFMNQVWNRAIEL
                     LNNKTDPAIRQARFRQMFHDQFDGAGIARFVLGRYWRSAGAEEQQEFVKLFENYVAFV
                     YTARLANLGGQTFKIRGSRSDGDGVIVSTDVISPGSTSPLRIDWRLVNDNGGYKINDV
                     IVEGISMAVTQRSEFASIMQRSGGQLRGLIAMMREKTASAVH"
BASE COUNT          325 a          429 c          468 g          315 t
ORIGIN      
        1 tgctgaggaa tgtggcgaag gcgtcatagc gcctcatcgc cattttcgct gccagagttc
       61 ctctgttcac cgagatgagg cagaggatcg gtgctgcggc tggtccattt tcctagtccc
      121 tgccgcgacc accagcacga aaggaatgcg gctaggcggc gcgatccggg tctgttgttt
      181 acggccttgc cgagttgctg cgcaccaagg gggagctcat tttaatggaa gggacacaga
      241 atgccgccgg ggcggctgag gatttgtttt tgaaggcgct cgactgggcg cgccggcaag
      301 gtgtccgatc ctgggaactt cgggcggcga cgagcctcgc cggttgtggc gcgacaagga
      361 gcggaccgaa gaggcacgtg agctgctcgc gccggtttat ggccagttta ccgaggggtt
      421 cgagacgacc gatctcaaag cggcaaaacc gttggtcgac tatttgcgac ggttgtaaaa
      481 cggataccgc ttcaagcaaa atgcggatat agtcgtcctg aggccggcac tggaaccact
      541 tgctggcagg aaaacaaacg aagacgagat tgcatctcga tttgcaccga ggtgaccacc
      601 ggacggccta ttcgcccatc ctgtgtgatc agttgtcaat gccatcgcca cacgatggcg
      661 tcggaggacc tgccgatatg atgcgccgtt cgctgctgac cgtcctcttg gtcctggttg
      721 ccaccacatc cttggcggct gcaccaccgg taaacccggc ggacgccatc gcctttatga
      781 accaagtgtg gaatcgggcg atcgagttgc tcaacaacaa aaccgatccc gcgataaggc
      841 aggcccggtt ccgacagatg ttccacgatc agttcgacgg agccggcatt gcccgatttg
      901 ttctcggccg ctattggcga agcgcaggcg cagaggagca gcaggagttc gtaaagcttt
      961 tcgagaacta tgtggcattc gtttacaccg ctcggcttgc caatcttggt ggccaaacgt
     1021 tcaaaatccg cggcagccga agcgatggcg acggggtaat cgtctcaacc gacgtgatca
     1081 gcccgggcag cacatcgccc ctcagaatcg actggcggct ggtcaacgat aacggcggtt
     1141 acaagatcaa tgatgtcatt gtcgagggta tcagtatggc ggtcacccaa cgctccgaat
     1201 tcgcctcgat catgcagcgc agcggcggtc aactacgcgg tctgattgct atgatgcggg
     1261 aaaagacggc aagcgcggtg cattaacggc gacacacgac cagtgtcaca cgacggctga
     1321 gctccggatt gtcgcaagcg ccctgtcgat gtctgaacag ctcgcttttt cctgagagat
     1381 cgacccgtcg cgataggtaa cggttcgaat cccttaccac gcttaccaat ctgtttagat
     1441 ctagcgcacc ttggttgggg tggagcgtta cgcatttagc gcgacgcagt ctatcgccaa
     1501 ctccgagggt gctccggccg tgaggtaagc ggagcac
//
LOCUS       DATILV010000730         7304 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3246973, whole genome shotgun sequence.
ACCESSION   DATILV010000730 DATILV010000000
VERSION     DATILV010000730.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7304)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7304)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7304
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3246973"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(238..360)
                     /locus_tag="VLJ17_17230"
     CDS             complement(238..360)
                     /locus_tag="VLJ17_17230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24760.1"
                     /translation="MWVFIVSCVVAAAIATGAAVSLQKFQEPAAVAFATSGVRI"
     gene            528..2462
                     /locus_tag="VLJ17_17235"
     CDS             528..2462
                     /locus_tag="VLJ17_17235"
                     /inference="COORDINATES: protein motif:HMM:NF036516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24761.1"
                     /translation="MRGRHSMHSVLMAVWGVLAAAGIAVAQTPPPSPPEIPAPRDAPF
                     PGAIRLAVEATDVTRHIFRVTETIPVQSGSLTLFYPKWLPGTHSPTGRIDALAGLMIQ
                     ANGQRMKWVRDAGDVYAFHIDVPPGITKLDLEFQFLSAGDGNEGRIVMTPEMLNLQWS
                     SVILYPAGYFARQITFEPSITLPDGWQFATALEVASTNGALATFNPVSLETLVDSPVF
                     AGRYVKRVELDASAIVPVRLNVFADRPELLEAKPEHLDAHRALVTQANRLFNAHHYDR
                     YEFLLAVTDRLGGIGLEHHRSSENVTPLTYFTEWDKNTDVRDLLPHEYTHSWNGKFRR
                     PADLWTANYNVPMRDSLLWVYEGQTQYWGQVLAARAGLWTKDQALDALAEVAALYDKR
                     VGREWKSLQDTTNDPIIAGRRAIPWRSWQRSEDYYSEGQLVWLDVDTLIRERSGGQKS
                     LDDFASAFFGISNGKWVPEPYAFDDVVKILNAVQPNNWADFLRERLESHDPRAPLDGI
                     TRGGYNLVYSDTPSDYRKNRESRRKLTDFTFSLGFVVGRESKLTDVLWDGPAYRAGLT
                     VGTQIVAVNGVAYDSDRLKEIVKATKTNSAAIDLLIKNGDRYSTVRINHQGGLSYPHL
                     VVRDASDSARPLDQILKPRN"
     gene            complement(2527..4071)
                     /gene="tcuA"
                     /locus_tag="VLJ17_17240"
     CDS             complement(2527..4071)
                     /gene="tcuA"
                     /locus_tag="VLJ17_17240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent tricarballylate dehydrogenase
                     TcuA"
                     /protein_id="HSV24762.1"
                     /translation="MNSAALAADEPDVLVVGAGNAALCAAISAHESGARVLMLEAAPI
                     EERGGNSHFTGGAFRFAFAGIDDLIAVLPSLAQENLDNVDFGTYTQEQFFDDLCTLTQ
                     YRSDPDLVEILVRGSLDTAKWVVRQGVKLQPGLGRQAYQVDGKFKFWGGLALHIWGGG
                     PELLKALYANAERRGIPIVYETPAIGLIREAGRLVGAMAEHRGAPVAIRAGAVVLACG
                     SFESNPEMRARYLGAGWELARVRGTRYNMGAGLAMAMDIGARPYGHWSGCHSVAWDIN
                     APPYGDLTIGDLFQKHNYPFGIVVNANGERYVDEGANFHSHTYAKYGGEIIRQPGMFA
                     WQVFDAKVSHLLRGEYRIRRVTKVEAGTLEELAGKLDGVDASGFLRTVREFNAACGTD
                     TPFNPNVLDGRRTCGLAIDKTNWANPLDTPPFHAYHVTTGVTFTFGGLKISKRGEVED
                     LYGRVIPGLYAAGEMVGGLFFHNYASGTGLMSGATFGRLAGRSAAGFALKSSATAGRR
                     AGREPS"
     gene            complement(4185..5273)
                     /locus_tag="VLJ17_17245"
     CDS             complement(4185..5273)
                     /locus_tag="VLJ17_17245"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSV24763.1"
                     /translation="MLVRIVGMIGVTPPSSNASLHVIEGKLSPAYLTEIARAHEAAGF
                     DMALVGYSSSSAEGFLVALHAAMQTERLGYLVAHRPGFVAPTLMARKIATLDHLTGGR
                     LAVHIITGKTDDEQRGDGDFSPKDERYRRAAEYLEVMKLAWSNERSFDFSGEFYRVEG
                     ARSDVRPLQKPHPLLFFGGASDGALDMGARLCDVYAIYAEPLASTRERIAQFRAQAAS
                     FGRAPGFNVSVRPIIAPSEGAAWDKANRILATMKGKGWSRQEGAAGPVDNAGKRLMRF
                     AVESDIHDERLWMPIARATGALGNTSCLVGTAEQVAESILKYYRLGVDSFLIRGFDPL
                     NDAIEFGRELIPRIKAGAIEIDSLKAAG"
     gene            5552..6535
                     /locus_tag="VLJ17_17250"
     CDS             5552..6535
                     /locus_tag="VLJ17_17250"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV24764.1"
                     /translation="MGWHRTKAPFIAGFVAAQMIAAVPAAAQTYPTRPVTIVVPFAAG
                     GGNDILARLIAQHMGQALGQQFVIENRAGAGGTIGARAVAKAPADGYTLMVGHSGVFG
                     VAPALYVDPGYEPQRDFAPIGLIASYQQILVTHPSLPVRNIGDLIALARKQPGKITYA
                     SAGVGSGSHVSSELFAVMADIKLTHVPYRGTGAMQGDLVGGHVDMAISTFPSVLGQIR
                     TGLLRTIAVTGEQRSSIFQGVPTIAESGVPGYAAVIHYGMVAPASINRAIADRLNAEL
                     RAALGRDDVRARIADEGGEPLSSTRDQQAKDLAEEESKWGALVRKLGIKSE"
     gene            7057..>7304
                     /locus_tag="VLJ17_17255"
     CDS             7057..>7304
                     /locus_tag="VLJ17_17255"
                     /inference="COORDINATES: protein motif:HMM:NF019421.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HipA domain-containing protein"
                     /protein_id="HSV24765.1"
                     /translation="MGGARPKAVVEDDQGLWIAKFNRFDDKWNYARIEHAMLLLARAC
                     GLTTAESKVVPVGGRDVLLIKRFDREKTKAGYLRARMV"
BASE COUNT         1427 a         2259 c         2189 g         1429 t
ORIGIN      
        1 gaataatcgc tgacgccgcc ggcgtcctgg tccgttttgc aggccgttgt ttcaagccca
       61 ggcaaccttt gccgggtcag tgcttagaag ctcgtgaaac attcctgagg agcgcccgca
      121 aggatgcgtc tcgcaggatg ggcgggtgat cagcggcgtt gccgtccttc gaggcgcgca
      181 cctcctttga caagctcagg agcgcgcccc tcaaggacca aattgtttca cacgcgctta
      241 gatgcgcacg ccggaggtcg cgaaggcgac agccgcaggt tcctggaact tctgcagtga
      301 cacagcagcg ccggtcgcga tggctgcggc gacgacgcaa gagacaatga aaacccacat
      361 gttcgtcatg ctctctttag gggagatcga ggcattatgg actcgcccgg gtcgatatca
      421 agccgttcca ttgggacgac atccgaaatt tgctaaataa ttgaaaacac ctgcggcgta
      481 gcgcatgatc ggcgtgtgcg agacagctat tcgccggaag gggctaaatg cgcggtcgcc
      541 attcgatgca ttcggttctc atggccgtgt ggggcgtcct cgccgcggcc ggcatcgcgg
      601 tggcccaaac gccgccgcct tcaccgccgg agatcccggc gccgcgagat gcgccgtttc
      661 ccggggcgat tcgtcttgcg gtcgaggcaa ccgatgtgac ccgccacatc tttcgcgtca
      721 cggaaacgat cccggtacag agcggctcgc taacgctgtt ctatcccaaa tggctgccgg
      781 ggactcattc tcccaccggg aggatcgacg cccttgcggg cttgatgatt caagctaatg
      841 gccagcggat gaaatgggtg cgcgacgccg gcgatgtata tgcgtttcac atcgacgtcc
      901 cccccggcat cacgaagctc gatttggagt ttcagttcct ctcagcgggc gacggcaacg
      961 agggccgcat cgtgatgacg ccggagatgc ttaatctgca gtggagcagc gtcatccttt
     1021 atccggccgg ctattttgcg cgccagatca cattcgagcc gagcataacg cttccagatg
     1081 gctggcagtt cgcgaccgcc cttgaggttg catccaccaa cggtgccttg gcgaccttca
     1141 atcctgtttc cttggaaact ctggtggatt cgccggtatt tgcgggccgg tatgtcaagc
     1201 gcgtggaact ggatgcatca gcgatcgtgc cggtacggtt gaatgttttc gccgaccgcc
     1261 ccgagctgtt ggaggcaaag cctgagcacc ttgacgcaca ccgcgcgctg gtgacccagg
     1321 ccaacaggct tttcaacgcc caccactatg accgctacga gtttctgctc gccgttactg
     1381 atcgcttggg cggcatcgga ctggaacatc accgctccag tgagaatgtg acgccgctca
     1441 cctactttac cgagtgggac aagaacacgg atgtccgaga tctgctgccg cacgaataca
     1501 cccactcttg gaatggtaag ttcaggcgcc ccgccgatct gtggaccgca aactataacg
     1561 tgcccatgcg agacagcttg ctatgggttt atgaaggcca gacgcaatat tgggggcagg
     1621 tgctggcagc gcgggcgggg ctttggacga aggatcaagc cttggacgcc cttgcggagg
     1681 ttgccgcgct ctacgacaag cgcgtcgggc gcgaatggaa gtcgcttcag gatacgacca
     1741 atgacccaat tattgccggt cggcgtgcaa ttccttggcg gagctggcag cgcagcgaag
     1801 actattattc ggaaggccag ttggtttggc tcgatgtcga caccttgatc cgcgaacggt
     1861 cgggcgggca aaagtcgctg gacgacttcg cgtcggcttt tttcgggatc agcaacggca
     1921 aatgggtgcc agagccttat gccttcgacg acgtcgtaaa aatactgaac gccgtgcagc
     1981 caaacaactg ggcagatttt ctgcgcgagc gtctcgaaag tcacgaccct cgggcgccgc
     2041 tcgacggcat tacacgcggc ggctacaact tggtctattc cgatacaccg tcggactacc
     2101 gcaagaacag agagtcccgt cgcaagctca ctgatttcac gttctcgctg ggtttcgttg
     2161 tgggccggga aagcaagctg acggacgttc tatgggacgg tcccgcctac cgcgccggcc
     2221 tgacggtcgg aacccagatc gtcgcggtga acggtgtggc ctacgatagt gatcgcctga
     2281 aggaaatcgt caaagccacc aagacaaata gcgcggctat cgatttgttg atcaagaatg
     2341 gcgaccgtta cagcaccgtg cgtatcaacc accaaggtgg cttgagctat ccccatttgg
     2401 tagtgcggga cgcaagcgat tccgcgcgcc cgctcgacca gattctcaag ccgcggaact
     2461 aaagacactc gccggcttct cttgtggttc cgaccttccg gcatttatcg ggcatttgtt
     2521 cccaacttac gatggttccc gacctgcccg ccgccccgcg gtcgcggagg atttcagcgc
     2581 aaaccccgct gcgcttcgtc cggcgagccg gccgaaggtc gcccccgaca tcaggccggt
     2641 tccgctggca taattgtgga agaacagccc gcccaccatc tcgcccgccg cgtagagccc
     2701 cgggatgaca cggccataga gatcctcaac ctcgccgcgc ttggaaatct tgaggccgcc
     2761 gaacgtgaag gtcacgcccg tggtcacgtg ataggcgtga aacggcgggg tatcgagcgg
     2821 attggcccaa ttcgtcttgt cgatagcgag gccacaggtc cggcggccgt ccaggacatt
     2881 gggattgaac ggcgtatccg tgccgcaggc ggcgttgaat tccctcaccg tgcgcaaaaa
     2941 ccccgaggcg tcgacgccgt cgagcttgcc ggccagttcc tcgagcgtgc cggcctcaac
     3001 cttggtgacc cggcggatgc gatattcgcc gcgcagtagg tggctcacct tggcgtcgaa
     3061 cacctgccag gcgaacatgc ccggctgcct gatgatttcg ccgccgtatt tggcgtaggt
     3121 gtggctgtgg aagttggcgc cttcgtcgac gtagcgttcg ccgttggcgt tgaccacaat
     3181 gccgaatgga taattgtgct tctggaacag gtcgccgatc gtgagatcgc catagggcgg
     3241 cgcattgatg tcccatgcca cagaatggca accggaccag tgaccgtagg gccgcgcccc
     3301 gatatccatc gccatggcga gacctgcgcc catgttgtag cgtgtgccgc gcacgcgcgc
     3361 caactcccag ccggccccca agtacctcgc gcgcatttcc ggattggatt cgaagcttcc
     3421 gcaggcgagc acgacagccc ctgcccggat cgcgaccggc gctccgcggt gctctgccat
     3481 tgcgcccacg agccgcccag cttcgcggat aagcccgatc gctggagtct catagacgat
     3541 cgggatgccg cgccgctccg cattggcgta aagcgccttg agcaactccg gtccgccgcc
     3601 ccagatgtgt aatgcgagac cgccccagaa cttgaatttg ccgtcgacct ggtaagcctg
     3661 ccgtccgagt cccggttgca gcttcacgcc ctgccgcacc acccacttcg cggtgtcgag
     3721 actgccgcgc accaaaattt cgacgaggtc aggatcggag cgatattgcg tcagagtgca
     3781 caggtcatcg aagaactgct cctgcgtata ggtgccgaag tcgacgttat cgagattttc
     3841 ctgcgccagc gacggcagaa cggcgatgag atcgtcgatg cccgcgaacg cgaaccgaaa
     3901 ggcccctccg gtgaaatgcg agttgccgcc gcgctcctcg atcggcgcgg cttcgagcat
     3961 cagcacccgc gccccgctct catgtgccga gatcgccgcg cacaaggccg cattgccggc
     4021 cccaaccacg agcacgtccg gctcatcggc cgctagtgcg gcggagttca tggtctctcc
     4081 ggagcggcgt gatccatttc aggcgacaca caagtggata cgccatgcac tcccaggatg
     4141 acggcgacaa acgcgagcca cactctccgc attgcaggaa ctcctcaccc ggcggccttg
     4201 aggctatcga tctcgatggc gcctgccttg atccgcggga tgagttctcg accgaactcg
     4261 atggcatcgt tcaacggatc aaacccgcgg atgagaaatg agtccacccc aagtcgatag
     4321 tatttgagga tggactcggc gacctgctcc gcggttccga ccagacatga cgtattgccg
     4381 agcgccccgg tcgcccgcgc aatcggcatc catagacgtt cgtcatgaat gtcgctctcc
     4441 acggcgaagc gcatgagtcg cttgccggca ttgtcgaccg gcccggccgc cccttcctgc
     4501 cggctccagc ccttcccttt cattgtcgcc aagatgcgat ttgccttgtc ccatgccgca
     4561 ccctcgctcg gcgcaatgat cggacgaacc gaaacgttga agcctggagc ccgcccgaaa
     4621 gaggccgctt gcgctcggaa ctgcgcgatg cgctctcggg tcgaggcgag tggttcagca
     4681 tagatcgcat agacgtcgca aagccttgcg cccatatcga gagcgccgtc ggaggcgccg
     4741 ccgaagaaca gcaggggatg cggcttttgc agcgggcgaa catcggaacg cgcgccttcg
     4801 acccggtaga actcgcctga aaaatcgaac gaccgttcgt tcgaccaggc gagcttcatc
     4861 acctccagat attccgccgc ccgtcggtag cgctcgtcct ttgggctgaa atcaccgtct
     4921 ccgcgctgct cgtcgtccgt ttttcccgtg atgatgtgta cggccagtct gccgccggtc
     4981 aagtgatcca aagtggcgat cttacgcgcc atcaaggtcg gcgccacgaa accggggcgg
     5041 tgcgccacca gatagccaag ccgctccgtc tgcatcgccg catggagagc caccaaaaag
     5101 ccttccgccg acgaagacga atagcccacc agcgccatgt cgaagccggc ggcctcgtgg
     5161 gcgcgcgcga tttcggtcag ataggcgggc gacagcttgc cctcgatgac atgcaagctg
     5221 gcattgctgc tgggtggtgt aactccgatc attcccacga tcctgaccag catggctctt
     5281 cctctcgctg tgaaaatgaa tgtacgccag cgcgagcggc atagcgtatc aataaatgcc
     5341 ccaggcttat cgcccaagcc ggagccatga cgcagtctac cagccacttg tgcccttttg
     5401 cgaagctgtt gcgcaaacgg ggagtttgat ctcatactta aaccgggtgc ggtttttttc
     5461 gccatgtacg tcatttggcg aatggaatga tcgaaagacc aagtccgcaa cgccaaggcg
     5521 gtttggaaac agaacataag agcatgtccc gatgggttgg catcgaacta aagcgccatt
     5581 catcgccggc ttcgttgcgg cgcaaatgat cgcagccgtt ccggccgcag cgcaaaccta
     5641 tccgactcgt ccggttacca tcgtggtgcc gttcgcggca gggggcggca atgacattct
     5701 ggcgcgcttg atcgcgcagc acatgggcca ggcgctcggc cagcaattcg tgatcgagaa
     5761 ccgcgccggc gccggcggca ccatcggggc acgggccgtc gccaaagctc cggcagatgg
     5821 ttataccttg atggtcggtc attccggcgt gtttggcgtg gctccagcgc tttacgtcga
     5881 tcccggctat gaaccgcagc gggatttcgc accgatagga ctgatcgcct cctatcaaca
     5941 aattctcgtc actcatccgt cgctgccagt gcgtaacatc ggcgatctga ttgcgcttgc
     6001 tcgcaagcag cccggcaaaa ttacctatgc gagcgccggc gtcggttccg gctcccatgt
     6061 ctcgagcgag ttgttcgctg tcatggccga cattaagctg actcatgtcc cttatcgcgg
     6121 taccggcgcg atgcagggcg atctcgtggg cggtcatgtc gacatggcga tctcgacgtt
     6181 cccgtctgtg ttgggacaaa tccgcaccgg tctgttgcgc acgatcgcgg tgacaggcga
     6241 gcagcgctcg tcgatttttc agggcgtgcc gaccatcgcg gaatcgggcg tcccaggcta
     6301 cgccgcagtg attcactacg gtatggtggc gccagctagc atcaatcgcg ccatcgcgga
     6361 ccggctcaac gccgaactgc gcgccgcact tggccgcgac gacgtgcgtg cgcgcatcgc
     6421 agatgagggc ggcgagccgc tctccagcac acgagaccag caggcgaagg atttggctga
     6481 ggaagagtcg aagtgggggg cattggtgcg taagctcggc atcaagtcgg agtaattact
     6541 ggcatccttg aggccgcttt cgagaagcaa aattggattc ggatttccgt ttggaaagat
     6601 agcagacttt ccaattcgcc gcgtttccaa gagcaaaggc ctagtatcgg ccccgacctc
     6661 ctaggccgtg gaccatacgg tccctgcact ccgtacggcg cctcgggcgg ctcgtgtatg
     6721 gcaagtccta tctggcgcgc ggtgatgccg ttgctatcga tccggtggaa cctcgctgcg
     6781 gttcgtggtt agttcgaagc gggcggcggt taccgcctcg gtcattccgg gcaatgtctc
     6841 tccgaactcg actacctcct ggagtcgcca gatgaccgtg ccggcgcact gagcattggg
     6901 ctgggccagc agccgcccgc gccgaaacgc aaattcaacc aaacgatcgc tttagacaaa
     6961 ttgcaggcaa gagccgatgc cattgtcgac gacgaagagt tgcccgttga cccggaagtc
     7021 atccaagccg aagagctgct tcttgaaggc acgtcgatgg gtggtgcgcg acccaaggca
     7081 gtcgtcgaag atgaccaggg actttggatc gccaagttca accgattcga tgacaaatgg
     7141 aattacgccc gcatcgaaca tgccatgctt ctgcttgcgc gcgcctgcgg tctcaccacg
     7201 gctgaaagca aggttgttcc cgtcggcggg cgggacgtgc tgcttatcaa acgcttcgat
     7261 cgggagaaaa caaaggcggg ctatctgcgc gcccgaatgg tcag
//
LOCUS       DATILV010000731         2980 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2219060, whole genome shotgun sequence.
ACCESSION   DATILV010000731 DATILV010000000
VERSION     DATILV010000731.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2980)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2980)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2980
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2219060"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..418)
                     /locus_tag="VLJ17_17260"
     CDS             complement(<1..418)
                     /locus_tag="VLJ17_17260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018646887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HSV24766.1"
                     /translation="MNRAIDTEVLIVGAGPVGLTLAIDLAWRGVDVTVADLRRAGEPP
                     SVKCNSISARSMETFRRLGLAAALRAAGLPADYPNDVASRTTATGIELCRIGIPSRAE
                     RYGANEGPDSLWPTSEPPHRVNQIYFEPMLFAHAAAQ"
     gene            complement(503..1474)
                     /locus_tag="VLJ17_17265"
     CDS             complement(503..1474)
                     /locus_tag="VLJ17_17265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV24767.1"
                     /translation="MQVRVMLLATLAIIASFANVESASTQAFPTRPVRIVVGYPPGGV
                     ADIVARLMGQWLSERLGQPFVIENRPGAASNIATEAVVRAPGDGYTLLLVNPANAISA
                     TLYDNLNFNFIRDIAPVAGIVRVPNVMVVNPLVPARTVDEFIAYARANPGKVNYASAG
                     NGTTVHLAGALFNMMTGVAMVHVPYRGSTPALTDMLGGQVQVMFDALPSSIEHVRTGK
                     LRALAVTTAARSPALRDIPTLSDFVPGFEASVWQGIGVPKSTPALIVEKLNKEINSAH
                     SDPKMRSQLASLGSTELALSPAELGTLIAEETEKWARVIRGANIKTQ"
     gene            1596..2588
                     /locus_tag="VLJ17_17270"
     CDS             1596..2588
                     /locus_tag="VLJ17_17270"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HSV24768.1"
                     /translation="MVKIADWDDHIGRRLRLRDLRVFFAVVQSGSLSKAAAQLRVSHP
                     AVSQVIADLEHTLGARLFDRSSRGVEPTIYARALLVRGRAAFDELKQGIRDIEFLTDP
                     TAGELTVGYVQSNANTIFPQIVERFSADHPRVVMRADIVPTPSFTFPGLRDRTYDLIL
                     ARISKLLPDEDLASDLDVETLFNDPWIIVASARAHWARRRKIDLAELLDEPWLMPPAD
                     TPSYEIVAEAFKARGLRMPIATLVTYSIDLRARLSARGRFITVVPKSILRDADEAHPL
                     KELRVNLPTRPWLVAILTLKNRTLSPVVKRFIECAREVAKPFAKASDPERSAGH"
     gene            complement(2751..>2980)
                     /locus_tag="VLJ17_17275"
     CDS             complement(2751..>2980)
                     /locus_tag="VLJ17_17275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24769.1"
                     /translation="RNGTRLVQHTATLTELDGLSGDDVEFSIPTSDKLFDLLMRDGPV
                     FAEVPGAKVIFPAQNGRARETNKFLTSCVSP"
BASE COUNT          576 a          917 c          916 g          571 t
ORIGIN      
        1 gttgggccgc ggcgtgcgcg aagagcatgg gctcgaaata aatctgattg acccggtgtg
       61 gaggctccga agtcggccac aaactgtccg gcccctcgtt tgcgccatat cgctcggccc
      121 gcgaggggat gccgatgcgg cagagttcga tccccgtcgc cgtcgtgcgg gaggcgacat
      181 cgttcggata gtccgcggga agcccggccg cacgcagcgc tgcggcgagg ccgaggcggc
      241 ggaaggtctc catcgagcgg gccgagatcg agttacactt gacgctcggc ggctcccctg
      301 cccggcgaag atcggcgacc gtgacatcga cgccgcgcca agccaggtct attgcaagcg
      361 tcaggccaac cggcccggcg ccaacgatca gcacctccgt atcaattgcg cgattcatcg
      421 cttgctcgca gccagcgcgc tccgcaccgc gccggatgac gcgagccgtc ggacggctcg
      481 gacgagacaa actgatgcgg cgtcattgtg tcttgatgtt tgccccccgg atcactctag
      541 cccatttctc tgtttcctcg gcaatgagcg tcccaagctc ggcgggcgaa agtgcaagct
      601 cggtactgcc caagctcgca agctgcgacc tcatcttggg atcggagtga gcggagttga
      661 tctccttgtt gagcttctcg acaatcaggg ccggcgtgct cttgggcacg ccgattccct
      721 gccaaacgct tgcctcaaaa cccggcacga aatcgctcag ggtcgggata tcccgcaatg
      781 ccggagaacg cgccgccgtc gtgacggcca gagcgcgcag cttgccggtc cgcacgtgct
      841 cgatcgagga cggcagcgcg tcgaacatga cttgcacctg cccgccaagc atgtcggtca
      901 gcgccggcgt ggagccgcga tacggcacat ggaccatggc gacgccggtc atcatgttga
      961 acagcgcgcc ggcgagatga acggtcgtac cattgcccgc cgacgcatag ttgaccttgc
     1021 ccggattggc cctggcatat gcgatgaatt cgtcaacggt cctggccggg accaatgggt
     1081 tcaccaccat gacgttgggc acccggacaa taccggcgac gggtgcgatg tcgcggataa
     1141 aattgaaatt gagattgtcg tagagagttg cgctgatcgc gttcgcggga ttgactagga
     1201 ggagagtata tccgtccccg ggcgcgcgca cgacggcctc ggtggcgata ttgctggctg
     1261 cgccaggacg gttctcaatg acgaatggct gtccgagccg ctccgacagc cactgaccca
     1321 tcaggcgcgc gacgatgtcg gccacaccgc cggggggata gcccacgacg atgcgcacgg
     1381 gtcgagtggg aaaggcttgc gtgctcgcac tctcgacatt tgcaaagctg gcaatgatgg
     1441 cgagtgtcgc caggagcata acccgaactt gcatggcgct ttctcttggt cggacgcacg
     1501 atcttgtcga taagtggccg tctgatgggc atgattgcaa ccatcggcta taaccggtat
     1561 cctctattaa gtttcagcga tgaaagcggg cgcttgtggt caagatagcc gattgggacg
     1621 accatatcgg acgtcgactg cggctgcgcg atctgcgggt gttcttcgcg gtcgtgcagt
     1681 caggaagcct cagcaaggct gcggcgcaac tgcgtgtctc ccatccggcg gtatcgcagg
     1741 tcattgccga cctcgagcat accttgggtg caagactgtt tgatcgcagc tcgcgcgggg
     1801 tcgagcctac aatctacgcc cgcgcgctcc tcgtgcgcgg ccgggcggca ttcgatgaat
     1861 tgaagcaagg gatcagggac atcgaattcc taaccgatcc cacagccggc gaattgacgg
     1921 ttggatacgt ccaatcgaac gccaacacga tctttccaca gatcgtcgaa aggttctctg
     1981 cagatcatcc gcgcgtcgtc atgcgcgccg acattgtccc tacgccatcc ttcaccttcc
     2041 cgggactgcg ggatcgcacc tatgacctca tcctcgcgcg gatttccaag ttgctgccgg
     2101 acgaagatct ggcgagcgac ttggatgtcg aaactctttt caacgatcca tggatcattg
     2161 tggcatctgc gcgggcccat tgggctcgcc gtcgcaagat cgatctcgcc gaactcctgg
     2221 acgagccttg gctcatgccg cctgccgata cgccgagcta cgagatcgtg gcagaggctt
     2281 tcaaagcgag gggcctccgg atgccgattg caacgctggt gacttattcg atcgatcttc
     2341 gggcgagatt gtccgcacgc ggccggttca tcacagtcgt cccgaagtcg atacttcgag
     2401 atgcggacga ggcgcacccg ctgaaagagc tgcgggtcaa cctgcctacg cggccatggt
     2461 tggttgcgat cctgacgctg aagaaccgca ccttgagccc ggtcgtcaag cgattcatcg
     2521 agtgcgcccg cgaagtcgcc aagccattcg cgaaggcctc tgacccggaa cggtcggccg
     2581 ggcattgagc gggtggtctg cgcagacgac cgctgttggc acttcgctgc gcagtccgag
     2641 ccctcaagcc tacgccaggt tttggggaac tgcggaagtc aaccgacgac cagcaccggc
     2701 cggcgcgacg cgaatgaccc aacgcagacc ttcgctgctc tcgacgagac ttagggcgag
     2761 acacaactcg tcagaaactt gttcgtctct cttgctcgcc cattttgggc cggaaaaatg
     2821 accttggcgc ctggcacctc tgcgaagaca gggccgtcgc gcatcaaaag gtcgaacaat
     2881 ttatctgaag ttgggatcga aaactcaaca tcgtcaccgc tcaggccatc cagttctgtc
     2941 agagtcgccg tgtgttgaac cagacgcgtg ccattcctga
//
LOCUS       DATILV010000732         1720 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_683999, whole genome shotgun sequence.
ACCESSION   DATILV010000732 DATILV010000000
VERSION     DATILV010000732.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1720)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1720)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1720
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_683999"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..406)
                     /locus_tag="VLJ17_17280"
     CDS             complement(<1..406)
                     /locus_tag="VLJ17_17280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24770.1"
                     /translation="MNIMNRSRLRRRLSFALAFTLSGCAQFLLFAKTDTFATTQKDTS
                     YARSSRTQQRLDFAPYDSPDGPIIRVALMTDVSSASVGCSSGLIINRSSEGFGSEKVS
                     IESLRVELRKQPGSATPPSSGAGYRVFVGSSSE"
     gene            complement(414..1298)
                     /locus_tag="VLJ17_17285"
     CDS             complement(414..1298)
                     /locus_tag="VLJ17_17285"
                     /inference="COORDINATES: protein motif:HMM:NF024503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB C-terminal domain-containing protein"
                     /protein_id="HSV24771.1"
                     /translation="MLALSVIVHLIFYVALIKLDSWAMMRALAGGRHQTALVKLIEIA
                     PPPERSTLRAAPESLERADVSRLQFDPATADDVHLIQRSPKATEQRGNSGRLPSADLI
                     EKQLRASRGSADRDRPGLATHQTTPPRTSSIQANRVPQFDETVTAQIPPTQAAPAPPA
                     PSPKSDATANAATLEAAPAGARRGNASESTALGLEAVQGQYMAAVRVKIRKANERIMP
                     RDWIKDVLRDKVSADFSLVIKRDGQILATRLIRSTGYSVLDDYARQAIYTASPFEGFP
                     QVAGNTITFTVTIYFFTL"
BASE COUNT          343 a          458 c          536 g          383 t
ORIGIN      
        1 cttctgacga actgccgacg aacacacgat atccggcacc gctggacgga ggcgttgcgc
       61 tgcccggttg tttgcggagt tcgacccgca atgattcgat cgataccttc tcgctgccga
      121 aaccttcgct cgagcggtta ataatcagtc cggaggagca accaaccgag gcggaactga
      181 cgtcggtcat cagcgcgact cgaatgatcg ggccgtccgg cgaatcgtaa ggagcgaagt
      241 cgagtcgctg ctgtgttcgg gaagatcgag cgtagctcgt gtctttctgc gtcgtcgcga
      301 acgtgtccgt ctttgcaaag aggaggaact gcgcgcagcc cgagagagtg aatgccaggg
      361 cgaacgacaa acgacgccgc aggcggcttc tattcatgat gttcataacg gaactacaga
      421 gtgaagaagt aaatcgtcac tgtaaaagtg atcgtgttac ctgcgacctg ggggaatcct
      481 tcaaagggac ttgctgtata tatagcttgt ctggcgtagt cgtcaagtac tgaatagcct
      541 gttgagcgaa tgaggcgagt ggctaggatc tgcccgtccc gcttaatcac cagggaaaag
      601 tcggccgata ccttgtctcg gagaacgtct ttgatccagt cgcgaggcat tatccgctcg
      661 tttgcctttc tgatctttac ccgaacagcg gccatgtatt gtccctgcac cgcctccaat
      721 ccaagcgccg tggattcgga agcattgccg cgtcgcgcgc ctgccggagc ggcttccagg
      781 gtcgcggcgt ttgcagttgc atcagacttc ggtgaaggag cggggggagc gggcgcagct
      841 tgcgtcggag ggatttgagc cgttaccgtt tcatcgaact gcgggacgcg gttagcttga
      901 atcgatgacg tccgaggagg cgttgtctga tgggttgcta atcccggccg gtcccggtcg
      961 gcggatccgc gcgacgccct cagttgtttt tcaataaggt cagccgacgg aagacggccg
     1021 ctgttcccgc gttgctcggt tgccttggga gagcgctgaa tcaagtgaac gtcgtcggcg
     1081 gttgcgggat cgaattgaag gcggcttaca tcggcgcgct cgagagactc tggggcggcg
     1141 cgcaacgtgg agcgctctgg cggcggcgca atctctatta acttcaccaa cgccgtctgg
     1201 tgtctgccgc ctgccagtgc tcgcatcatt gcccacgaat cgagcttgat aagcgcaacg
     1261 tagaagatca gatgaacgat gacggagagg gcgagcaaga aggcgaatcg gcggtcgcgg
     1321 cctgcactgg accacaatga ggcgagcggg ccctcgccga ccggttgacc atcgatgtat
     1381 ctgttcagag ttttcagcac agcttggcgt cggtttctag tttctggttt cctgggagcg
     1441 caggcatctt gcctgcttct ttctctctta gcgccatgca ggcaggatgc ctgcgctccc
     1501 gggaaaccag aaaccaccaa agaaattata gcgtcagttt ggggctattg cgaagggttt
     1561 ggaatgagga tgattcgtaa aacatgatgc gtgagccttg gtctctccgc tcttggatca
     1621 tttgaatttg aacccgcgct gtcgggctgc ttcgtaaagc agcatcgcgg cggctgcggc
     1681 tacgttgagc gattcgactc ccgccgccat cggtatgtgc
//
LOCUS       DATILV010000733         5326 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3754852, whole genome shotgun sequence.
ACCESSION   DATILV010000733 DATILV010000000
VERSION     DATILV010000733.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5326)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5326)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5326
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3754852"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..676)
                     /locus_tag="VLJ17_17290"
     CDS             complement(<1..676)
                     /locus_tag="VLJ17_17290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24772.1"
                     /translation="MTRQMQFAAVLGALTILLMTDIARAAQPYVLVTGRRDPRIYAIN
                     LAVALQAQNNNTGNAIVARTLVNPARYDGKLLGDPANIIVSEDQKTAYVMNHHGAVVN
                     AEFLQHGGRGNISVMDVARMLKRENDNSVEPLLAVYDVGWFGGVGLALLPNAIIASAG
                     EGWLAEAGSNRISIIDRRTGGLRGQIQMPLTGPGVRQLRAGCPSWPVPFVTPTPPPVV
                     PILAPDP"
     gene            complement(790..1695)
                     /locus_tag="VLJ17_17295"
     CDS             complement(790..1695)
                     /locus_tag="VLJ17_17295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006938830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /protein_id="HSV24773.1"
                     /translation="MIKPRIAVIGAGLMGHGIAQVFGLAGHDVTVTDTHAPTLASAKD
                     RILANLKALNDDVKAVERIRICPGLAEAVADADFIVEAVREDLGVKQQLFAEIERAAR
                     PDVILASNTSVIPITAIMGGLNDRARALGTHWWNPPYLVPLVEVIATEWTAPAAIDFT
                     LKLLAEVGKTPVHVKKDVPGFVGNRLQHALWREAISLIENDICDAATVDTVIKAAFGR
                     RLAVLGPLENADLVGTDLTLAIHRTVLPAIDARPGPSPYLEKLVAQGKLGMKTGEGFR
                     TWTPEQQAELRALVLQHLKAARGSG"
     gene            complement(1862..2680)
                     /locus_tag="VLJ17_17300"
     CDS             complement(1862..2680)
                     /locus_tag="VLJ17_17300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006938829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSV24774.1"
                     /translation="MSDDFLKNPATLFDIKGKTAIVAGASGAFGALAAKVLAGAGANV
                     VLAASNVEELKKVAAECEALGGKTEIVAKRPSSEANCDAIVAAAVAKFTRLDILVVAS
                     GLNKVSKIIDQKPEDFLNVMDANVTQSWLMARAAARQMLKQGKDGNGFGGRIILTSSA
                     RGLLGHPAGYTAYCASKSAVDGITKALGCELGETGITVNALGPTVFRSPLTAWMYEDT
                     ERAREVRKGFLARVPKGRLGEPSDLAGPLLFLASRASDFYTGHVLYADGGYTAG"
     gene            complement(2867..3208)
                     /locus_tag="VLJ17_17305"
     CDS             complement(2867..3208)
                     /locus_tag="VLJ17_17305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006938828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSV24775.1"
                     /translation="MEVKRFAEAKAYEAPNHRNYASLRLFGLDAGGPKQFVVGLSHFL
                     PGGGAGPDASPTEKVYVVLSGELTVIVAGKEAVLGANDSCFIGPNETREIINRSNDVV
                     TMLTAVSAPPK"
     gene            complement(3209..4051)
                     /locus_tag="VLJ17_17310"
     CDS             complement(3209..4051)
                     /locus_tag="VLJ17_17310"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009030984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HSV24776.1"
                     /translation="MAKKIRGVSFEENLHNAMGLEFYNLSHRFGYQSPNWPYFEDVKI
                     ERIHYMAKSGVLSQRITTSMHNTTHIDAPAHVVQGTPFIDEVPLPHFFGSGIVVSIPK
                     KKWEPITYEDLERAAGKHVRPRDVVIVNTGWHKLYDDSEDYFCRAPGFVPSAGKWFVE
                     KKVKVVGHDTQANDHPLATAIGPQRNGPLHPHLAAEYKEWSGGRDWKEDFPEWEPVHR
                     ILFKNGILGIENVGGDIDKVTGRRCTFAFFPWNWDRGDGCIIRLVAMCDPKGAYRIER
                     GEKL"
     gene            4469..>5326
                     /locus_tag="VLJ17_17315"
     CDS             4469..>5326
                     /locus_tag="VLJ17_17315"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV24777.1"
                     /translation="MVKKIALEEHFLSPGFEDYWQTTSGEIAPDIYRQALARLGEFGD
                     LRLAQMDRGGIERAVLSISGPGVQIERDTAIAVRRARESNDFLAREIQKRPDRYAGFA
                     HLAMQDAKAAADELERAMRELGFVGAMINGHTNGQYLDHPSLYPIWERAEALGAVIYL
                     HPADPPSTMPVLNGTYGLKRATWEWGVETGSHALRLIFGGHFDRFPRAMLALGHLGEM
                     LPYLMWRFDSRAVFYAVKLARRPSDYIRENIVMTISGMFSAEPLNCAIAAVGHERVMF
                     ATDYPFEPPH"
BASE COUNT          942 a         1691 c         1670 g         1023 t
ORIGIN      
        1 ccgggtcagg agccagaatg ggaacgacgg gcggcggggt cggggtgacg aacggaaccg
       61 gccaggacgg gcaaccggcc ctgagctggc ggacgccggg accggtcaat ggcatctgga
      121 tttgcccgcg caagccgccc gtcctgcggt caataatgct gatgcggttg gagccggctt
      181 ccgccaacca accttccccg gcgctggcga tgatggcatt cggcagcaaa gcgaggccga
      241 caccgccaaa ccagccgacg tcgtagacgg caagcagcgg ctcgacggaa ttgtcatttt
      301 cccgcttgag catcctggca acgtccatca cggaaatgtt gccgcggccg ccgtgctgga
      361 gaaactcggc attcaccacc gctccatgat gattcatcac atacgcggtc ttctggtctt
      421 cgctgacaat gatattcgcc ggatcaccaa gcagcttgcc gtcgtagcgc gccgggttga
      481 ccagggttcg ggccacaatg gcgtttccgg tgttgttgtt ctgcgcctgc aacgcgacgg
      541 caagattgat ggcatagatc ctcggatccc tgcgccccgt caccaataca tagggctgtg
      601 cggcgcgggc gatgtctgtc atcagcagaa tcgtcaaggc gccgagaact gccgcgaatt
      661 gcatctgtcg tgtcattggt atcctcccct ctatcgcgcc tcgcttgcac tgacgtcgcg
      721 catcgacagc cgctccgtat ggcaccgcta tggtgggttt cgcaaaaaag ctcaacccat
      781 caaaacggtt catccgctcc cccgcgcggc tttgagatgc tggagtacaa gggcgcgtag
      841 ctcggcctgc tgctccggcg tccaggtgcg aaacccttcg ccagttttca tgccgagctt
      901 gccttgcgcg acgagctttt cgaggtaggg cgacgggcct ggcctcgcgt cgatcgctgg
      961 cagcacggtc cggtggatcg ccagcgtgag gtcggtgccg acgaggtcgg cattttccaa
     1021 gggacccagc accgcgagcc ggcggccgaa tgcggccttg atcaccgtgt cgacggtcgc
     1081 ggcgtcgcag atgtcgttct cgatgagcga gattgcctcg cgccacagcg cgtgctgcag
     1141 ccggttgccg acgaagcccg gcacgtcctt cttcacatga accggcgtct taccgacctc
     1201 ggcaagaagc ttcagggtga agtcgatcgc ggccggcgcc gtccattcgg ttgcgatcac
     1261 ctcgaccagc ggtaccagat agggcggatt ccaccagtgg gtgccgagtg cacgggcgcg
     1321 gtcgttgagg ccgcccatga tggcggtgat tgggatgacg gacgtattgc tggcgaggat
     1381 cacgtctggc cgggcggctc gttcgatctc ggcgaacagt tgttgcttga cgccaaggtc
     1441 ctcgcgcacc gcctcgacga tgaaatccgc atctgccacc gcttcagcga gcccggggca
     1501 gatgcgaatc cgctcgaccg ccttcacgtc atcattgaga gccttgagat tggcgaggat
     1561 gcgatccttg gcgctcgcca gcgttggtgc gtgggtgtcc gtaacggtga catcgtggcc
     1621 ggcgagccca aacacctggg cgatgccgtg gcccattagt ccggcgccaa ttacggcgat
     1681 gcgcggtttg atcatgactc aaggccacca acaacaccgt gtcaggcccc gcgaaagcgg
     1741 ggcacccaat aacccccggc cgcgggggag gagcgatgcc gtggcccatc ccttccagga
     1801 gtactggatc gcccgcgtcg ggtgatgaca cttttggaag tggctcattg gtgccatcac
     1861 gctatcccgc cgtatatccg ccgtcggcat aaagcacgtg cccagtgtag aagtcggacg
     1921 cccgcgaggc gaggaacagc agcgggccgg cgaggtcgga gggctcgcca agccggccct
     1981 tgggcacgcg ggcgaggaag cctttccgca cttcgcgggc gcgctcggtg tcttcgtaca
     2041 tccacgccgt cagaggcgag cggaacacgg tcggccccag cgcattgacc gtgatgccgg
     2101 tctcgcccag ttcgcagccc aacgccttgg tgatgccgtc gacggcggac ttcgatgcgc
     2161 aataggcggt gtagccggcc ggatgcccca acagcccgcg cgccgacgag gtgaggataa
     2221 tccttccgcc aaagccgttg ccgtccttgc cttgcttgag catctgccgg gctgcagcgc
     2281 gcgccatcag ccacgactgg gtgacattgg cgtccatcac attgaggaaa tcttccggct
     2341 tctggtcgat gatcttcgac accttattga ggccggaggc gaccaccaga atgtcgaggc
     2401 gagtgaactt cgccaccgcg gccgcaacga tcgcgtcgca attggcctcg gaactcgggc
     2461 gcttggcgac gatctcggtc ttgcccccca gcgcctcgca ttcagcggcc actttcttga
     2521 gttcctccac attgctggcc gccagcacca cattggcacc ggcgccggcc agcaccttgg
     2581 cggccagtgc cccgaacgcc ccggacgcgc cagcaacgat tgcggtcttg cccttgatgt
     2641 cgaacagggt ggcggggttt ttcaggaagt cgtcggacat gggctggccc tcgcagatgt
     2701 ggcccggatg gggtgaagag cgcaatccag gagcatctcg ccctcccccg gagggttgga
     2761 tcgccgcagg cgatcggggg tgtagtcaag tgcagcatat gggcggggct gtcaccccca
     2821 cccggccgct tcgcggccgc tctccccctg caggggaggc gaaggatcac ttcggcggcg
     2881 cggacactgc cgtcaacatg gtcaccacgt cgttactgcg gttgatgatc tcgcgcgttt
     2941 cgttgggccc aatgaagcag ctgtcgttcg cgccgagtac ggcctcctta cccgccacga
     3001 tgacggtcaa ttcacccgac aggaccacgt agaccttctc ggtcggcgag gcatcggggc
     3061 cggcgccgcc gccgggcagg aagtgcgaca ggccgaccac gaactgcttt ggtccgccgg
     3121 catcgaggcc gaacagacgc aacgatgcat aattgcggtg gttaggtgcc tcataggctt
     3181 tcgcctcggc aaagcgtttg acctccattt agagcttctc ccctctttcg atccgatacg
     3241 cacccttggg gtcgcacatc gcgaccaatc tgatgatgca gccgtcgccg cgatcccagt
     3301 tccatgggaa aaatgcgaat gtgcagcgcc ggcccgtcac tttgtcgatg tcgccgccca
     3361 cgttctcgat gccgagaatc ccattcttga acaagatgcg gtgcactggc tcccattcgg
     3421 ggaaatcctc cttccagtcg cgccctccag accattcctt gtactccgcg gcgagatggg
     3481 gatgcagagg tccgttgcgc tgcggaccga tcgcggtggc gagcggatga tcgttggcct
     3541 gggtgtcgtg gccgacaacc ttgacctttt tctctacgaa ccatttgccg gcggacggca
     3601 caaagcccgg cgcacggcag aaatagtcct cgctgtcatc gtaaagcttg tgccatcccg
     3661 tgttgacgat gacgacgtcg cgcggcctca catgtttgcc ggcggccctc tcaagatcct
     3721 cataggtgat tggctcccac ttcttcttcg ggatcgacac cacgatgccg gagccgaaga
     3781 aatgcggcag tggcacctcg tcgatgaacg gtgtgccctg gaccacgtgc gccggcgcgt
     3841 cgatatgggt agtattgtgc atcgaggtgg tgatgcgctg ggacagcacg cccgacttcg
     3901 ccatgtagtg gatgcgctcg atcttgacgt cctcgaaata cggccagttg ggggactggt
     3961 agccgaaccg gtgggacagg ttgtagaatt caagccccat cgcgttgtgg aggttctcct
     4021 cgaacgacac gcccctgatc ttcttcgcca cttggacctc ccagtgcccc tcgccatgcg
     4081 gcctcatcgg gcggcagggc caatgtcatg caggttacga aatgaatagc cccgatgttc
     4141 ctttcatcgc aagggcttgg aataacccgt tcgcgtagcc tggatggcgc aaccgcctct
     4201 tcgcggttgc gtaagccagg gccggcatct tcattcatga ttgcgcaagg tgtgccgaat
     4261 ggggggggga gggcattccc ggattgaggg accgcaaagc atggttcctc aatccgggct
     4321 tctacacgcg gccgtcgtca cccccggact tgttccgggg attgacacgg cggccaaccg
     4381 aaacaaacgc acttctcgcg aaggagatgg atacgcgggt caagcccgcg tatgacgtaa
     4441 tcgaaattga gacattcaag agagccacat ggtcaagaag atcgcgcttg aagagcattt
     4501 cctatcgccg ggcttcgagg actattggca aaccacatcg ggcgagatcg cgcccgacat
     4561 ctatcggcaa gcgctggcgc ggcttggcga attcggcgac ttgcgccttg cccagatgga
     4621 tcgcggcggg atcgaacgtg cggttctttc catctccggg cccggcgtgc agatcgagcg
     4681 cgacaccgcg atcgcggtgc gccgtgcgcg ggaatccaac gatttcctcg cccgcgagat
     4741 ccagaagcgc cccgaccgct atgcgggttt cgcgcatctt gccatgcagg atgccaaggc
     4801 cgcggcggac gagcttgagc gcgcgatgcg cgaattgggc tttgtcggcg ccatgatcaa
     4861 tggccacacc aatgggcaat acctcgacca tccttcgctc tatccaatct gggagcgcgc
     4921 cgaggcgctt ggcgccgtga tctacctgca tccggccgat ccgccctcga ccatgccggt
     4981 gctcaacggc acctatgggc tgaagcgtgc gacctgggag tggggcgttg agaccggctc
     5041 gcatgcgctg cgcctgatct tcggcggcca tttcgaccgc tttccgcgcg ccatgctggc
     5101 gctcgggcac ctgggtgaga tgctgccgta tctgatgtgg cgcttcgaca gccgtgccgt
     5161 gttctacgcc gtcaagctcg cccgccgccc ctcggactat atccgggaga atatcgtgat
     5221 gacgatttcc ggcatgttct cggccgaacc gctcaactgc gccatcgcag cggttggcca
     5281 cgagcgcgtc atgttcgcga ccgactatcc gttcgagccg cctcac
//
LOCUS       DATILV010000734         6119 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2219618, whole genome shotgun sequence.
ACCESSION   DATILV010000734 DATILV010000000
VERSION     DATILV010000734.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6119)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6119)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6119
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2219618"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..230
                     /locus_tag="VLJ17_17320"
     CDS             <1..230
                     /locus_tag="VLJ17_17320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24778.1"
                     /translation="GQRYVYLPAHDANRLSIGEYWRSIGIADLADHKMDKYVNRLVNK
                     INGAVEVAYNQREKYIGLPNIKWPAPNLLNW"
     gene            complement(777..1784)
                     /locus_tag="VLJ17_17325"
     CDS             complement(777..1784)
                     /locus_tag="VLJ17_17325"
                     /inference="COORDINATES: protein motif:HMM:NF014542.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HSV24779.1"
                     /translation="MIEAIVLTGFLGSGKTTLLGQLLRQPGFSRTAVIINEFGEIGLD
                     HDLVEASEESVIELQTGCLCCKIRNDLATTLDELLRRRDKGSVTPFTRVVIETSGLAD
                     PAPILQTLMTDAMISERIVMGGVVTTVDALNGADTFDREEISVKQAAVADRLVMTKTD
                     LAGAPRLSLIRRLRAINPTAPVLTAQRGKIDPARLFDDRLYDPLTKSVDVQSWLRAEA
                     VGHVHAQERHDVETYAIVRADPIRAVALTLFLETLCEHCGADLLRLKGIVNVLESPDR
                     PAVIHGVQHVFHPPSWLARWPSDDHRSRIVFITRRIPRGWVDALLDALDAEVAAVSAK
                     R"
     gene            complement(1781..2080)
                     /locus_tag="VLJ17_17330"
     CDS             complement(1781..2080)
                     /locus_tag="VLJ17_17330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24780.1"
                     /translation="MSTTSEQLHELITQSLLAWRLAGSVRSTGDGAILISCQEHKIRI
                     EPASSDLPFRWVVIINNRSRPAISLVAVLRMVRAALEPGYATMRVRIAPVPVVPM"
     gene            complement(2080..3507)
                     /locus_tag="VLJ17_17335"
     CDS             complement(2080..3507)
                     /locus_tag="VLJ17_17335"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV24781.1"
                     /translation="MLDTIIRGGNVVTPEGIGQCDVAISGETIAAVTAPGALSSELAG
                     RVIDASGRVVMPGGIDPHVHLHHVWIKPDGTALTTAGPEQVGRAALFGGTTTLIDFAY
                     WRDGMSARQAVEARDRDFVGKSPCDWAYHIMLHSEPPPEFAGQLAEAIQAGYPTLKIF
                     TTNILPSRSGRMIDFGDIWEAFQVLAKSGGLGVIHAEDNDIVMHMYAKLIREGRVGFE
                     HLAEVHNRLSEDLSFRRVLRLAESVPGTALYMMHVSAATGVAAIAEARNKELPVYGET
                     LHQYLGYTAEDYKRPNGQIYHTYPSLKSAEDQMALWDGAVRGSIHCIATDELCCTLRD
                     KTVGNRIDDTTGGNSGVEPRLAVMYTEMVVRRGYTLSRYVDLVSSNAARIMGLYPRKG
                     AIAVNSDADITILDPTRRGRITASDLHETDYTPWEGHDIFAWPVMTMLRGKVMVESGR
                     YLASPADGRYLKRKIAAEILNRPAL"
     gene            complement(3651..4538)
                     /locus_tag="VLJ17_17340"
     CDS             complement(3651..4538)
                     /locus_tag="VLJ17_17340"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV24782.1"
                     /translation="MPVKLAENFRAVFYAPFYATHALGFYSREGVEVELINSPAPAAA
                     ASDLLGGTIDLSWGGPMRVMKAREIDPNSPLVCFCEVAARDPFFLVGRGIRSEFQLAD
                     LARLRLATVSEVPTPWLCLQHDLRQNGIDPDRIERVVKRTMAENLKALRSGEIDVAQV
                     FEPYASMALKSGIGDILYAASTRGPTTYTTFLATRRSIERNRAAFAGMVRAVRRMQAW
                     LGDHGPEELAAIVVPFYSQVESDVLTSSLRRYHDARLWPRSPEVSRDGFAQLSASLLS
                     GGFISRLHAYEACVDQSLY"
     gene            4537..5568
                     /locus_tag="VLJ17_17345"
     CDS             4537..5568
                     /locus_tag="VLJ17_17345"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV24783.1"
                     /translation="MAKQALDVTGRLQAGSGSAITRLLRGIVLSFAAFAWAIPARPQT
                     AYPTRPIQLVVTVPPGGAADFVARIISAKLADAVGQPLIVANRGGAAGTIAAAGVAKS
                     DPDGYTLLLNTIATHGIGPHLYANLPYDPTRGFAPVILIAKLPLIMTVTAMLPAQSVT
                     EVIALAKAQPGQLAFASAGTGGAPHLAGELFKIAAGIDLLHVPYRGSGPAVVDLIAGR
                     VAIMFDAAPSLLPFIISRQLRPLAAASRQRHRLLPQVPSFAELGYDRMDISLWYGVVA
                     PAGTPQAIVQRLNAELAKILEMADVRKSFADQGADVEGGTPAAFDAFMREESARWGAV
                     VKQAGIQPE"
     gene            complement(5854..>6119)
                     /locus_tag="VLJ17_17350"
     CDS             complement(5854..>6119)
                     /locus_tag="VLJ17_17350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HSV24784.1"
                     /translation="EVQEAYSLTGDADYLVKMTVPDLKTLSRILGEVFLPHRSVAHVH
                     SYVVLDRVKQTTRLPLRHLSEVRGFRGAPPRSPSGRKRSAKSS"
BASE COUNT         1203 a         1852 c         1899 g         1165 t
ORIGIN      
        1 agggacagcg ttatgtgtac cttccagccc atgatgctaa tcgtctcagc attggagagt
       61 attggcgttc cattggcatt gcagacctcg cagatcacaa aatggacaag tacgtgaaca
      121 gacttgtcaa caagatcaac ggcgccgtgg aagtggctta taatcagcgc gaaaaataca
      181 tcggtctgcc aaatatcaag tggccggcgc cgaacttgct gaactggtaa agcaaggctg
      241 tgaggcgcgc aacactgtgc acctggagca gccgattgat cgggtttccg aacatctcag
      301 gtcaaccgtc ccaccggctg ataacccaac ccgccaagat gcagcgagac cgaggttttc
      361 aacgaggccg aggtgacgga gctcgcgggc gaattcctag aagtttccaa cgaagcggaa
      421 ctcgatcggt ttctcggcga cctgatcaag aaagccggta gcgccctagg aaaggtcgtc
      481 agatcgcctg tgggtcaggc cgtcggcggc ctgctaaagg gagcggcgaa gcaagcgctg
      541 ccgctcgccg gagctgcatt ggggggcgct gtcggtggac cactgggagc tcagatcggt
      601 agtggattgg cgtcagccgc gggcgacgcc ttgggcctgg agagcgcggc cgaagaccgc
      661 gaattcgaag gtgccaagaa cttcgtcaag atggctggcg ataccgtgaa atctccggtg
      721 acccggtggg cggagctgcg aggctccccc ctatcccgat caacggcgaa aaacggctat
      781 cgctttgctg agaccgcggc tacttccgca tcgagcgcat cgagcagtgc gtcgacccag
      841 ccgcggggaa tgcgccgcgt aatgaagacg atgcggctgc ggtggtcatc cgatggccag
      901 cgcgccagcc acgagggcgg atgaaagaca tgctggacgc cgtggatgac agcaggccgg
      961 tccgggctct ccaggacatt cacgatgcct ttgagccgca ggaggtcggc accgcaatgc
     1021 tcgcagagcg tctcaaggaa gagtgtcagt gccaccgcgc ggatcggatc cgcgcgcacg
     1081 atcgcgtagg tctcgacatc gtgacgctct tgtgcgtgca cgtgtccaac ggcttccgct
     1141 ctcagccacg attggacatc gaccgactta gtgagaggat cgtaaaggcg gtcatcaaag
     1201 aggcgtgccg ggtcgatttt accccgttga gcggtcaaga cgggcgcggt tgggttgatt
     1261 gcccgtagcc tccgtatcaa tgagagtcgg ggcgcgccgg cgagatcggt ctttgtcatg
     1321 acgaggcggt cggcaaccgc ggcctgcttt acggaaatct cctcacgatc gaacgtatcg
     1381 gcgccattca gagcatcgac cgtcgtgacg acgcctccca tgacgatacg ctcggaaatc
     1441 attgcgtcgg tcatcagggt ctgcaggatc ggtgcggggt cagccagccc gctggtctcg
     1501 atgaccacac gggtaaacgg agtaacgctg cccttgtctc gacgccgcag caattcgtcg
     1561 agcgttgttg cgagatcgtt gcggatcttg cagcacaggc atccagtctg gagctcgatt
     1621 acgctttcct cgctcgcctc gaccaagtca tggtcgaggc cgatctcacc gaactcgttg
     1681 atgattacgg cggttcgaga aaatccgggt tgccggagta gttggcccag caacgtcgtc
     1741 ttgccactcc cgaggaagcc cgtgaggact atggcctcga tcacatcggc accaccggaa
     1801 caggggcaat gcgcaccctc atggttgcgt aaccgggctc aagcgcggcg cggaccatgc
     1861 gaagcacggc aacgagcgaa atggcagggc ggctgcggtt gttgatgatt accacccatc
     1921 ggaacggcag atcagatgac gccggctcga tgcggatctt gtgctcctga caggatatta
     1981 gaatcgctcc gtcgcccgta ctgcggacgc taccggcaag tcgccaagca aggagggact
     2041 gggtgataag ctcgtgtagt tgttcagagg tggtggacat tacagcgccg gccggttcag
     2101 gatttcagcc gcgatcttgc gcttgaggta gcggccatct gctggactgg cgagataccg
     2161 accactctcc accatgacct tgccgcgcaa catcgtcatc accggccagg cgaaaatatc
     2221 atggccttcc cagggcgtat agtctgtctc gtgcaggtcg gatgcggtga tcctgccgcg
     2281 cctcgtcgga tctaggattg tgatgtcggc gtcgctgttc acggcgatcg cgcctttgcg
     2341 cggataaagt cccataattc tggcggcatt gctggagacg agatcgacgt atcgcgacaa
     2401 cgtgtatccg cggcgcacga ccatctcggt atacatgacg gcgaggcgcg gctcgacccc
     2461 cgaattgccg ccggtcgtgt cgtcgatgcg attgccgacg gtcttgtctc tgagcgtaca
     2521 gcacagctcg tcggtggcga tgcaatggat cgagccgcgc acggctccgt cccagagcgc
     2581 catttgatcc tccgcggatt tcagcgacgg ataggtgtga tagatttgcc cgttgggccg
     2641 cttgtagtct tcagccgtgt aacccagata ctggtgcagc gtttcgccgt acacaggcaa
     2701 ttccttgttg cgcgcctcgg caatggcggc aacgccggtg gcggcggaga cgtgcatcat
     2761 gtacagcgca gtcccgggca cgctttcagc gagccgcagg acgcggcgga aactcagatc
     2821 ctccgacaga cggttgtgga cttcagcgag atgctcgaag ccaacccggc cttcgcggat
     2881 caacttggca tacatatgca tgacgatgtc attgtcctcc gcatggatga cgccgagccc
     2941 acccgacttc gccaacacct ggaacgcctc ccagatgtcg ccgaaatcga tcatgcgccc
     3001 gctgcgcgag ggcaggatgt tagtggtaaa tattttcagc gtcgggtacc cggcttggat
     3061 cgcttcggcg agctgcccag cgaattcagg gggcggctcg gaatgcaaca tgatgtggta
     3121 ggcccaatca cacggactct tgccgacaaa gtctcggtcg cgagcctcga cagcctgccg
     3181 cgccgacatc ccatcccgcc aataggcgaa atcgatgagc gtcgtcgtac ccccgaacag
     3241 cgcagcgcgc ccgacttgtt cgggcccggc cgtcgtgagc gctgtgccgt caggcttgat
     3301 ccaaacatga tgcagatgca cgtgcggatc gatgccgccc ggcatgacaa cgcgcccgct
     3361 cgcgtcgata acccgcccgg ccagctccga ggagagcgca cctggcgctg ttacggccgc
     3421 aatggtctcg ccagaaatcg ccacgtcgca ttgaccgatg ccctcgggcg tgactacgtt
     3481 gccgccgcga atgattgtat cgagcatgcc gcctcccggt gtcgctttgc tcccacatcg
     3541 tgccaacccg gtacccccaa tggtcggact gggcagaagc gtagtgtgaa gcgtcgtgtt
     3601 tgatccggca atctccttgc gcggcgcaga ggatgccgag gaagctcctt tcaatacaag
     3661 ctttggtcga cgcaggcctc gtaggcatga agccgggaga tgaagccgcc ggacaggagg
     3721 cttgcggata gttgtgcgaa cccgtctcgt gagacttcag gagatcgcgg ccaaagtctg
     3781 gcgtcgtggt agcgtcggag cgagcttgtc aaaacatcgc tttccacttg cgagtagaac
     3841 ggcacaacga tagcggccag ctcctccggg ccatgatcac cgagccaagc ctgcatgcgg
     3901 cgaactgccc gcaccatccc ggcaaacgct gcgcgattac gctcgatgct gcgacgagtc
     3961 gccaagaagg tcgtataagt cgtcggccca cgcgtacttg ccgcatagag gatatcgccg
     4021 atgccggatt tgagcgccat cgaagcataa ggctcgaaca cctgcgccac atcgatctct
     4081 ccgcttcgca acgctttgag attctccgcc atggtccgtt tgaccacccg ctcaattcga
     4141 tccggatcga tgccgttctg gcgcagatcg tgctgcaagc acaaccatgg cgtcggcacc
     4201 tccgaaaccg tcgccaatct cagccgcgcc aaatccgcaa gctggaattc cgatcggatg
     4261 cctcggccga ccaggaagaa cggatcgcgg gcggcgactt cgcaaaagca cacgagcggc
     4321 gagttggggt cgatttcgcg tgccttcatc acccgcatcg gtccgcccca ggaaagatcg
     4381 atggtgccgc cgaggagatc cgatgcggct gccgccggtg caggcgaatt tataagctca
     4441 acctcgactc cttcccggct atagaaaccg agcgcgtgcg tggcatagaa tggtgcgtag
     4501 aataccgcgc ggaaattctc ggcgagcttg actggcatgg cgaagcaggc tctggacgtt
     4561 accggtcgat tgcaggcggg cagtggcagc gcgattacgc gactcttgcg aggcattgta
     4621 ctctcgttcg cagcctttgc ctgggcaatt cccgcacgtc cccagaccgc gtacccgact
     4681 cggccgattc agctcgtcgt gacagtgcca cccggcggcg cggccgattt cgtggcgcgt
     4741 ataattagtg ccaagctcgc ggacgccgtg ggacagccgc tcatcgtcgc gaatcgcggc
     4801 ggggcggccg gaacgattgc ggctgcgggc gttgccaaat cggatcccga tggttacacg
     4861 ctattactga atacgatcgc aacccacggc atcgggccgc acctttatgc aaacctgcca
     4921 tatgatccga ccaggggttt tgcgccggtc attctgatag ctaagttgcc cttgatcatg
     4981 acggtcacgg cgatgttgcc ggcgcaatcg gtcacggagg tgatcgcact tgcgaaggcc
     5041 cagccggggc aactcgcgtt cgcgtcggcc ggcaccggcg gcgcgccgca ccttgccggc
     5101 gagctgttca agattgctgc ggggattgat cttctccatg tgccctatcg cggcagcggg
     5161 cctgcggttg tcgatctcat tgctgggcgc gttgcgatta tgttcgacgc cgcaccgtca
     5221 ttgctgccct tcatcatctc gcgacaactt cggcccctcg ctgcggcgag ccggcagcgc
     5281 catcgcttgc ttccgcaggt gccctccttc gccgagctcg gctacgatcg tatggacatc
     5341 tcgctgtggt acggggtggt ggccccggcc ggcacgccgc aagccatcgt gcaacgactt
     5401 aatgccgaac tcgccaagat cctggagatg gcggatgtcc gcaaaagctt cgccgatcaa
     5461 ggggccgatg ttgaaggcgg caccccggcc gcattcgatg cgttcatgcg tgaagaatcg
     5521 gcccgctggg gcgctgtcgt caaacaggcc ggcatacaac cggaataatt gtcgaaggtc
     5581 cggctatggc aacaacggca agccctgcac gatggcctca cgatgcagcg cggaccgctt
     5641 ggggcgcaat cgcgctctca agccgctcca tcatgaaatc gatgtcggcc gcggtttcgc
     5701 gcgagaccgg gcccaggctt gcgctggcta tcgcttttca acacgccgcg gcgccacagc
     5761 accgggttgg gcgtcgacct ccgccgcagc acattgagct gatggcgaag gacgagaatt
     5821 tcggcttgca acgcagttgt cgtcgaggaa ctgtcaactg cttttggccg atcgcttgcg
     5881 tcctgaggga gagcggggcg gcgcgcctcg aaatccacgt acctcggaca aatggcgcag
     5941 cggcaagcgc gtggtctgct tcacgcggtc gagcaccaca taggaatgca cgtgcgcgac
     6001 gctccggtgc ggtagaaaaa cctcgccgag aatgcgcgat aatgtcttga ggtccggcac
     6061 cgtcatcttg accagataat cggcgtcgcc ggtcaacgaa taggcttctt ggacttcct
//
LOCUS       DATILV010000735        20333 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3755455, whole genome shotgun sequence.
ACCESSION   DATILV010000735 DATILV010000000
VERSION     DATILV010000735.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 20333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20333
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3755455"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..310)
                     /locus_tag="VLJ17_17355"
     CDS             complement(<1..310)
                     /locus_tag="VLJ17_17355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009031061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent dehydrogenase, methanol/ethanol
                     family"
                     /protein_id="HSV24785.1"
                     /translation="MRKFLISTALSTTVVMATGSVYANDELIKLSQDAKQWVMPTGNY
                     ANTRHSALKQITADNVGKLQVAWTFSTGVLRGHEGAPLVVGDMMYLHGPFPNPVFALN
                     L"
     gene            847..1731
                     /locus_tag="VLJ17_17360"
     CDS             847..1731
                     /locus_tag="VLJ17_17360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014493635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinoprotein relay system zinc metallohydrolase
                     2"
                     /protein_id="HSV24786.1"
                     /translation="MARPQTPNAALEVTEVATAVFVHVGVNDLMTAENEGGIANVGFV
                     VGDDAVAVIDTGGSVREGRRLLAAIRTVTTKPIRYVINTHAHPDHVFGNAAFAREGAI
                     FVGHRNLPRALSVRGPFYLNAFRRIMGDVLADVELVAPQWLVDDEVMLDLGNRIVTLH
                     AWGTAHTDSDLTLLDETTQTLFTGDLVFLQHVPVVDGSLRGWLAALGPLAGVAAKRAI
                     PGHGPATAWPRALDDERRYLERLAKDCRALIARGSSLAEAAATAGASEKSHWLLFEEY
                     NARNATAAFAELEWEEAR"
     gene            1767..2588
                     /locus_tag="VLJ17_17365"
     CDS             1767..2588
                     /locus_tag="VLJ17_17365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinoprotein dehydrogenase-associated SoxYZ-like
                     carrier"
                     /protein_id="HSV24787.1"
                     /translation="MIRQSAQNLLLAAFAITLGGSLAQPLLAAEPENPWPGLARDIFN
                     GRNLVDGAGLIAIEMPYRAEDAAIVPVTLRATLPPGDARVLRTITLVIDQNPAPVAAT
                     FQIGTGVTMISTRVRIDSYTNVHAVAELSDGQLYASEVFVKASGGCSAPTAKNAEEAK
                     ANLGQMRFRQFAKPADGPASGPREAQIMIRHPNNSGLQRDQVTLLYVPAFFVRELRIW
                     QGEEPVLTMDGGISISEDPNIRFNYLPNGATRFRVEAIDTDGRIFKGEWPVEAAM"
     gene            complement(2592..2948)
                     /locus_tag="VLJ17_17370"
     CDS             complement(2592..2948)
                     /locus_tag="VLJ17_17370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24788.1"
                     /translation="MRMIASIFALGAAICATGSTSALHADDLNDYPTVVRADYVFGCM
                     KANGETRHALEQCACSIDVIATILPYERYVTAETVLSMAQVPGTLGNQFRSTEYAKAA
                     VDELRRAQAEAEVRCF"
     gene            complement(2985..3221)
                     /locus_tag="VLJ17_17375"
     CDS             complement(2985..3221)
                     /locus_tag="VLJ17_17375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24789.1"
                     /translation="MVVIQIVMMVCRLGQPDLCEEQHLQFAWRGSLQQCAMSAQLYIA
                     QWIGEHPQWTVRNFRCEYPGIRDKADAGSAVSRV"
     gene            3438..4178
                     /locus_tag="VLJ17_17380"
     CDS             3438..4178
                     /locus_tag="VLJ17_17380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018239364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HSV24790.1"
                     /translation="MKFAAIADVHGNCVALEAVLADIAAVGITEVLNLGDHVSGPLEA
                     RRTADLLIERGFPSICGDQDRRLAKPDAASTGVTDRLDYQQLDPNHLEWLGNLPPTMV
                     YRDEVFLCHGTPRSDTTYWLDRVNDAAIIQASPIDDVEAEAFGIAQSLILCGHTHIPR
                     VVRLRDGRLVVNPGSVGCPGYIGKRPVIHTVQTGTPNACYAILERRPLGWNVTFRYLP
                     YDHISMAEMARRNGLPGWASALATGWVM"
     gene            complement(4282..5091)
                     /locus_tag="VLJ17_17385"
     CDS             complement(4282..5091)
                     /locus_tag="VLJ17_17385"
                     /EC_number="1.2.7.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018267749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018493 - formylmethanofuran dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0015948 - methanogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formylmethanofuran dehydrogenase subunit C"
                     /protein_id="HSV24791.1"
                     /translation="MTPLVLTLRERPEQRLDLAPLVPHRLAGVTAAEIERIELQTTRR
                     HVLVGDIFRLRMGDAAQIRIEGACDRLDRIGHEMAGGEIVVEGDVGTQTGRLMKDGRL
                     TVHGSVGPWAASGMKGGTIEIFGNAGDRLGGPDAGEIAGMRGGMVLVRGSVGERAGDR
                     MRRGTIVVERTAGAHAGSRMIAGTLVVVGRTGPLPGYLMRRGTIVLGEGSKELSPTFI
                     DCGVHDLVAARLMADFIGAYSAPAAKLFGRPLRRFAGDMAVLGKGEIFTRT"
     gene            complement(5088..5996)
                     /gene="fhcD"
                     /locus_tag="VLJ17_17390"
     CDS             complement(5088..5996)
                     /gene="fhcD"
                     /locus_tag="VLJ17_17390"
                     /EC_number="2.3.1.101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008836309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formylmethanofuran--tetrahydromethanopterin
                     N-formyltransferase"
                     /protein_id="HSV24792.1"
                     /translation="MRELTVKGVRIDDTFAEAFGMRATAAIITADSIRWARQAALTMT
                     GFATSVIGCGCEAGIAGELTAKQTPDRRPGVRVLLFAISTAELQKQLQARVAQCVLTS
                     PGSACYAGLNGQETLRLGSALRYFGDGWQISKRFGGKHYWRIPVMDGEFVCEATTGLT
                     KLAVGGGNLLIMGRTAQTTLAAAEAATAAIAKVPDVIMPFPGGIVRSGSKVGSKYKGM
                     SASTNHVYCPTLRGAVATTLDADATCVLEIVIDGLTSEAVAAAMAAGIAAVVRLGPKR
                     GAVRVGAGNYGGKLGPHHYHLRDLLP"
     gene            complement(5984..7618)
                     /locus_tag="VLJ17_17395"
     CDS             complement(5984..7618)
                     /locus_tag="VLJ17_17395"
                     /EC_number="1.2.7.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013532027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formylmethanofuran dehydrogenase subunit A"
                     /protein_id="HSV24793.1"
                     /translation="MLTLIKGGRIIDPANGRDEVGDIWISDGRIVEAQPGARADATCD
                     ATGKIVMAGAIDVHSHIAGWSVNTARLLLPEFRLGSAVRPGTTPLSNAGWPAFEIGCL
                     YAAMGFTTVVEPAVSPHYALHAHLELADIPIIDKATLAVLGNDDFLLGLIRAKESAAA
                     VSDYAAWTLAVTRSLGIKVINAGGAAAFKENAREFSFDDVVPSYGVSSREIVKTLQRA
                     ITDLGVPHPLHVHCNNLGVAGSADSALATIAAADGLPLHLAHLQFYGYGKEGKRGFSS
                     AAARLAEAVNANKSVTIDVGQVIFGQTVTVSLDILRQFRARNQARPRKWVILDGDANG
                     AGIVPYNYRSADFYNAVQWAVGMELFLLIDDPWRVFFTTDHPNGAPFTAYPEILALLM
                     SRDLRAQWIATLPPDAMAVTTLPSISREYSLVEIATMTRAAPARLLGLRDRGHLGAGA
                     IADVAVYENEADRAKMFRSAALVFKHGALVVRDGALTQRGFGRALSVEPARDRAIDRR
                     MKAYYDDRYGLSDDLIKVPDHAIGRPEPFELVPCAS"
     gene            complement(7612..8712)
                     /locus_tag="VLJ17_17400"
     CDS             complement(7612..8712)
                     /locus_tag="VLJ17_17400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="tungsten formylmethanofuran dehydrogenase"
                     /protein_id="HSV24794.1"
                     /translation="MHHAWIDGKPVALPTAIAAAARLIDASRHPLIAGLGTDIAGARA
                     AVALAQRIGAAVDHMNADSLLRDLEVMRQAGVMLTTPNETRVRADTLLLVGAGLIEAW
                     NELPQRLLGAMGEPDSVRGGERRIFWLCPGHHADAADKVAIIGGDCGELPALLAALRA
                     RVSGRPAAERHVCARALDELADALKAASFGVAVWSAAHLDALAIEMLCGIVNDLNATT
                     RFSGLPLAPGDNAVGVQQVCGWMTGFPVRTGFGRSYPDHAPWRYSAARLVESGETDCV
                     LWISAYRAAVPEWRRHPPTIALTPADAKFAKTPRVHIAVAGPGRDHDSVEHCAMIGTL
                     VAVAATHRSEALSVADAIAAITAELSAEPLPC"
     gene            complement(8896..9279)
                     /locus_tag="VLJ17_17405"
     CDS             complement(8896..9279)
                     /locus_tag="VLJ17_17405"
                     /EC_number="4.2.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012591405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008124 -
                     4-alpha-hydroxytetrahydrobiopterin dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006729 - tetrahydrobiopterin biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4a-hydroxytetrahydrobiopterin dehydratase"
                     /protein_id="HSV24795.1"
                     /translation="MTEQSKERTYTDAEIETRLKDELPHWYLENGWIRRKYRTNSWKG
                     TLMVINTVGHLAEAAWHHPDITASYAWVEVRLQNHAAKGITDKDFDLAKKIEEVVQWQ
                     PAKTGGALEGTPAGDQRFAYIKYDN"
     gene            9430..10398
                     /locus_tag="VLJ17_17410"
     CDS             9430..10398
                     /locus_tag="VLJ17_17410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018266613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ribofuranosylaminobenzene 5'-phosphate
                     synthase family protein"
                     /protein_id="HSV24796.1"
                     /translation="MPVHITVTVPARLHLGFLDLNGGLGRRFGSIGLAISNLQTKIAL
                     RRASKNEISGPERERVERHIDKMVRRLALSGGHTVNVLDVVPAHSGLGSGTQLALAVA
                     AGIRHLHDLPLDIEGDAIHLGRGARSGVGIGLFHRGGLVVDGGCLENEVPAPIVSHIS
                     FPDRWRIVVVLDPTRRGIHGAKEVAAFGSLPPFPDGDAAQLCRLVIMKALPAAAEQDI
                     VSFGSAIKELQARLGDYFAVAQGGMRFTSPDVAAVLAALDREGAFGIGQSSWGPTGFA
                     FAATLEEANRLARIAQRHPSGQGLDIRVCAGFNRAAEIAVHSVGVE"
     gene            10421..11317
                     /locus_tag="VLJ17_17415"
     CDS             10421..11317
                     /locus_tag="VLJ17_17415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004448482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent
                     methylenetetrahydromethanopterin dehydrogenase"
                     /protein_id="HSV24797.1"
                     /translation="MADKNILHMLTPLKHMSPFDVNMALDAGYDAVVTYTNVTLEEVT
                     GLVQDAIFSRPPKVGACTGMFFGGKNASLALDMMAKARTALVPPFGISFFADPGGSFT
                     TAAAMVACIEKILRDRKQRGLKGAKVAVFGATGVLGFSVAAISALEGADVTLVGYDGI
                     KRVENGADEIKRQFGVEVQGADGSDDAKKAALLGATEVAVCCGRAGVRILSRSQLDAA
                     RGLLIAADANAVPPSGIEGLEAMANGVELTAHGALGIGPLAIGNIKYKTESSLFSRMI
                     TATKPVQLDIREAFVLARELNG"
     gene            11310..12449
                     /locus_tag="VLJ17_17420"
     CDS             11310..12449
                     /locus_tag="VLJ17_17420"
                     /inference="COORDINATES: protein motif:HMM:NF014686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HSV24798.1"
                     /translation="MGNEAVLIAAISGRALAVSARRGGYRPLVADFFGDQDTLAATQA
                     HVSLGGAFRYGFREHEILEALECLAARHAPIGVVCGSGFEDRPHVVARLAQRWRLFGN
                     SADTIAKVKDPEAFAALCRDCDIAHPKVSVSPPPTREDWLAKRRGGSGGSHVATAMAR
                     ESDKGFYYQLRVPGTAVSVLLLANGVSATVLGFSTQWTCPTSRQPFRYGGAVRPADVA
                     PGMAERLSESACRLAAALSLTGLNSADFMVDDDNFWMLEINPRPGATLDLFESDADSL
                     FSLHMAACAGDLVAAPPRLDGARASAIFYAERNVVAPARFEWPDWSADRPNAGVAIKS
                     GEPLCTVHAGAATAMEARALADERLALVRTWTHNWAHEWAHANTP"
     gene            12425..13411
                     /gene="mch"
                     /locus_tag="VLJ17_17425"
     CDS             12425..13411
                     /gene="mch"
                     /locus_tag="VLJ17_17425"
                     /EC_number="3.5.4.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015597958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018759 - methenyltetrahydromethanopterin
                     cyclohydrolase activity [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methenyltetrahydromethanopterin cyclohydrolase"
                     /protein_id="HSV24799.1"
                     /translation="MGAREYAMTTALSINMRATKLVDGLVADAALLKIGVAQGSLGER
                     LIDAGSRFPGGIAAGLRIAEICMGGLGEVAVTPTAAAPNWPWMISTRSSNPVIACLAS
                     QYAGWKLSHSAGDSAFFALGSGPARALARREPLFEKLGYTDRADSGTLVLESTTGPPP
                     PIVEKIARDCGLTPRQLTIIFAPTQSLAGSTQVVARALEVALHKALELGFPIERIVDG
                     MAAAPLCPPHPDFIVAMGRTNDAIIYGGQAHLFVSGAVAEARLLAERLPSKGARHYGR
                     SFAELFESVKGDFYAIDPMLFSPAKVIVTAIESGESFHAGELNLGLLDASFS"
     gene            13395..14345
                     /locus_tag="VLJ17_17430"
     CDS             13395..14345
                     /locus_tag="VLJ17_17430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009210868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RimK family alpha-L-glutamate ligase"
                     /protein_id="HSV24800.1"
                     /translation="MRPSPEAVAIKPAARRPHVGLVVDNVDWHARELSRALTALGATS
                     APIRLTACGFATPSATGLAIDGLSGFLPDAIVVRSLSGGSFEAVTLRLGILHAAGELG
                     VMVWNDARAIERCVDKSMTSFLLARAGIATPPTWAVEAREAAAAIVAREAADRPLVLK
                     PLFGSQGRGLRLIRTSDDLPEPAVVNGVYYLQRFVGVEQDGFRDFRLLVSGGRVIAAM
                     ARHSSGWITNVKRGARPVTVVANEEMRELALRAATAVGAAFAGVDLLYDVDGRPTVLE
                     VNSMPAWSGLQKVTPFNIAAALAGDVIAAIKGRRARGRSA"
     gene            14342..15202
                     /locus_tag="VLJ17_17435"
     CDS             14342..15202
                     /locus_tag="VLJ17_17435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018266691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triphosphoribosyl-dephospho-CoA synthase"
                     /protein_id="HSV24801.1"
                     /translation="MTPRRIVAEAFTAACRDELEAPKPGNVHVFAPGHRMTTAQFIDS
                     AAAAVGPLCAPSTRVGVRIRGAVEATLQAVGTNTNLGILLLCAPLAAAAELEALELRD
                     ALARVLNDLDVSDADHAFAAIIQASPAGLGRAERHDVFAPAQVTLKQAMAEAADRDRV
                     ARQYATAFADVFDLGMTLHASASARWSDPKWAVLAVYLGFMSKFPDTHVIRKHGADVA
                     SDVHRAAMKFEALLWSIQDPTILLGELLAWDAALKARAINPGTSADLTVATLFGRYLQ
                     SVLPSRRKSD"
     gene            15356..15865
                     /gene="fae"
                     /locus_tag="VLJ17_17440"
     CDS             15356..15865
                     /gene="fae"
                     /locus_tag="VLJ17_17440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018406101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016840 - carbon-nitrogen lyase activity
                     [Evidence IEA];
                     GO_process: GO:0016051 - carbohydrate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formaldehyde-activating enzyme"
                     /protein_id="HSV24802.1"
                     /translation="MAIINGLCVGESLIGDGNEVAHIDLIMGPRGSAAESAFAHALKN
                     NKDGFTSLLAVVAPNLLCKPATVLFNKVTIKGAKQAVQMFGPAQHAVAKAVADSVAEG
                     VIPQAEADDIFICVGVFIHWEATDDKKIQDFNYRATKEAIARAVKGEPKAAEVVAKRN
                     EVKHPFASN"
     gene            complement(16006..16698)
                     /locus_tag="VLJ17_17445"
     CDS             complement(16006..16698)
                     /locus_tag="VLJ17_17445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009210871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HisA/HisF-related TIM barrel protein"
                     /protein_id="HSV24803.1"
                     /translation="MDIIPVLDVRGGVVVRARMGHRDQYRPIDSPLSPTSDPIDVMRG
                     LYSVYPFKTFYVADLDAIIGTGNNEAVLWRLKAEFPTVAFWVDNGVVDLLPARNWLEL
                     ELGHLVVGSESQKDMALVQHLSQCDRIVLSLDFRDQAFQGPPALLREATSWPRRLIVM
                     TLARVGSGAGPDLDRLCAIRDIAAGRKIYAAGGVRDRADLAALKRAGIAGALVATSLH
                     DGRLRGIDLEVG"
     gene            16752..17774
                     /locus_tag="VLJ17_17450"
     CDS             16752..17774
                     /locus_tag="VLJ17_17450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016922100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HSV24804.1"
                     /translation="MSIVIGWDIGGVHLKAARAESGRIVKAVQIAAPLRDGVERLTNA
                     FARAKAELGTAQRHVVTMTGELADTFTSRPEGVECLAMVAERELGGAPVSIYAGPAGY
                     VRPEQARDHTGLVASANWHACASLIAGHRSHALFIDMGSTTTDVVPIMDRNIAARGYT
                     DAQRLAAGELVYTGLIRGFVMASANRAPFRGVWTPLINENFANMADVHRILGDLPANA
                     DMMATTDGREKTREASRARLARMVGADNADADDQAWGALAQWFAEMQMRAIIDAIMLV
                     NSQHMLPPDAPLVAAGIGAHIVHEIARRIDRGYVAFDSLLDIEPNARATASQCAPAAA
                     LALLNS"
     gene            18602..19219
                     /locus_tag="VLJ17_17455"
     CDS             18602..19219
                     /locus_tag="VLJ17_17455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HSV24805.1"
                     /translation="MTSFLMIVHIALVGRKSVTFDPGVTTGRELQSSPQVEAEACREL
                     MMQITTELMRASGAVNSLQEVPALQSALHRELNSIRQSSGFAPQSAGNAAEKKDWHRI
                     KLQLIMSLRETRRISEIAAAARVSFSSLPAALQDVTTRLEAYAFLGVNATSSEAVLKK
                     TVDALRLCWHPDFATDEEDRRQREMRIKQINVAWDLISRKRMSAC"
     gene            complement(19240..>20333)
                     /locus_tag="VLJ17_17460"
     CDS             complement(19240..>20333)
                     /locus_tag="VLJ17_17460"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV24806.1"
                     /translation="RALAADRLEQPMMPQLSHDERNFAVICVTGIVVLGSVGLYAATG
                     NPDLPSGSGATQRPTSTFARESSNRESLAAAPQASVLENQQQLRSQANLPPVDEMIRR
                     LATRLLQNPKDAEGWRTLGWSYASIGRFAEAGEAYARAIELNPDIAEIRSARVEALVR
                     SADGVVSADAKDAIEETLRLDPKDSRARFYSGLAKEQGGDKASALADWTELLKDVNSD
                     ESLVSDLKNKITALERDLGVDAARSAAPKPVEGSGLLEALRARAAPPMSQSVEKGPSP
                     EDVRTAEAMAPADRSAMIQGMVDGLASRLEQSPRDPDGWIKLIRSRMVLGETNLAKRA
                     LARSLEVFADDKQQRDRIIAAAQQFGLAP"
BASE COUNT         3895 a         6282 c         6236 g         3920 t
ORIGIN      
        1 tcaggttcaa ggcaaagacc ggattgggga acggcccatg aaggtacatc atgtcgccaa
       61 ccaccagcgg ggcgccctcg tgaccgcgca aaacgccggt cgaaaacgtc cacgcgacct
      121 gcagcttacc gacattatcc gcggtaatct gtttgagcgc cgaatgccgt gtattggcgt
      181 aattgcctgt cggcatgacc cattgcttgg cgtcttgcga cagcttgatc agttcatcgt
      241 ttgcatagac cgaaccggtg gccatcacca ccgtcgtgct gagcgctgta ctaatgagaa
      301 attttcgcat cctctcctcc ctgtgacgtt tgccgccagg gtgctccgat gcggacaagc
      361 ccaagcgtgc ccggcctcgg caccaaccct tacctgggga agcatttccg gcagcgtgtc
      421 acggcatcag cacattgcga ggaccatttt tctctcacaa cctgcatagc ctacgaagaa
      481 acgccgacac tccctaacag ccgacgtcct tgaagccgga aactattacc tatactatgc
      541 ctgcagtttt aatggcgcaa tagaaaatga cgctgcaatt gatgagtgct gcgccataat
      601 tgtttcacaa atatcgtcat gatgtcgcct taatgtgcca gtgggcagcg ctaagaaatg
      661 agtgggcaac actcggattt gaatgggcag cgcgtccaat tgagtgggaa gcatttggaa
      721 tcaaggcgcc aaaccgtttc acgatgcaaa aaggggcgca taggcggccg gtgggcaagc
      781 aattgttccc gcggtactct gatccgacat gcactcgcaa tccttattct ggtcggattc
      841 agccctttgg cgcgtccgca gacaccgaac gcagcacttg aggttacgga agtagccacc
      901 gccgtatttg ttcacgtcgg cgtaaacgac ttgatgaccg ccgagaacga aggcgggatt
      961 gcaaatgtcg gcttcgtcgt cggcgatgac gcggtggccg taatcgacac cggcggtagc
     1021 gtgcgcgagg gacggcggct gcttgcagca attcgcactg tcaccaccaa accgatccgc
     1081 tacgtgatca atacccatgc ccatccggat cacgtgttcg gcaatgccgc ctttgcccga
     1141 gagggtgcaa tattcgtcgg tcatcgcaat ctgccgcgcg cgctttcggt gcgcgggcca
     1201 ttctacctca atgcctttcg gcgcatcatg ggcgacgtac tggcggacgt cgagctggtg
     1261 gcgccacagt ggctggtcga cgatgaggtt atgctcgatc tgggcaaccg catcgtgacg
     1321 cttcatgcgt ggggtacggc ccatacggac agcgacctta cgcttctgga cgagaccacc
     1381 caaacgctgt ttaccggcga tctcgtgttt ttgcagcacg tcccggtcgt cgacggcagc
     1441 ctgcgcggtt ggctggcggc gcttggcccc ctcgcgggcg ttgcagccaa acgcgccatc
     1501 ccgggccacg ggcccgcgac cgcatggcca cgcgcactgg acgacgaacg ccgctatctt
     1561 gaacgcttgg cgaaagattg ccgcgccttg atcgcacgcg ggtcgtccct ggccgaagcg
     1621 gcagcgaccg ccggcgcttc ggaaaaatcg cactggctgc tgttcgagga gtataatgcc
     1681 cgcaatgcga cggcagcttt cgccgagttg gagtgggagg aggctcgata atgttcgatg
     1741 cggcgcacaa gtacagcctg cgatcaatga tccggcaaag cgcgcaaaac ctgctgcttg
     1801 cggctttcgc gataacgctc ggcggcagct tggcgcaacc tctgctcgcc gcagagccgg
     1861 agaatccttg gcccggattg gcccgcgaca tcttcaacgg acgcaatctg gtggatggcg
     1921 ccggtctgat tgcaatcgag atgccgtacc gcgccgagga tgcggccatt gttccggtca
     1981 ccttgcgcgc gacgctgcca cctggtgacg cccgtgtgct aaggacgatc acactcgtga
     2041 tcgaccagaa tccggcgcca gtcgcagcca cttttcagat cggcaccggg gtcaccatga
     2101 tctccacgcg cgtgcgtatc gattcgtata caaacgtgca cgcggtggcc gagttgagtg
     2161 acggccaact ctacgcctcc gaggtattcg tgaaggcctc aggcggctgc tcggcgccca
     2221 cggcaaagaa cgccgaggag gccaaggcaa acttgggaca gatgcggttt cggcaattcg
     2281 ccaaaccggc cgacgggccg gcgagcggcc cgcgcgaagc ccagatcatg atccgccatc
     2341 ccaacaattc cggcctacag cgcgatcagg tcacgttgct ttatgtccca gcgtttttcg
     2401 taagggagtt acgcatctgg cagggcgagg agccggtgct gacgatggac ggcggtattt
     2461 cgatctcgga agatcccaat atccgtttca attatttgcc gaacggcgct acacgcttcc
     2521 gggtcgaagc gatcgatacc gacggccgta tattcaaggg cgagtggccg gtcgaagccg
     2581 cgatgtgacg gtcaaaagca gcgcacttcg gcttccgcct gagcgcggcg cagctcgtcg
     2641 accgccgcct tggcgtactc ggtcgagcgg aactggttgc ccagcgtacc gggcacctgg
     2701 gccatgctga gcaccgtttc tgcagtgacg taacgctcat agggcagaat ggtcgcaatc
     2761 acgtcgatcg agcacgcgca ttgctccagc gcgtgccgcg tctcgccgtt ggccttcatg
     2821 cagccgaata catagtcggc gcgcaccacg gtcggataat cgttgagatc gtcggcatgg
     2881 agggcggaag ttgatccggt ggcgcatatc gccgccccga gggcgaatat gctcgcgatc
     2941 attcgcatga caggtactcc gctagttgcc ggcacaataa ggcatcacac gcgcgacact
     3001 gcgctgcccg cgtctgcctt gtcacggatg cccggatact cgcaacggaa gttcctcaca
     3061 gtccattgag gatgctcgcc gatccattgc gcaatataga gctgcgccga catcgcacat
     3121 tgttgcagcg agccccgcca ggcgaactgg aggtgctgtt cctcacaaag atcgggctgc
     3181 cccaatctgc aaaccatcat gacgatctgg atcacgacca tgccttgcca gaaaggtcaa
     3241 tccgccgatc aattatgcca cattcgcagt cgactatgcc acgtgtcgcc aataagcgcc
     3301 gcgctcgaag tcttcccaac tcggctatct tcctcccgat cataattgcg ccgagtgtcg
     3361 gtatcgggcc aagtgttggt cgccattgcg gcgtttccca ccggagcttc tcaagaccac
     3421 aacacaggga tcaaacgatg aaattcgccg ctatagctga tgtccacggc aattgcgtag
     3481 cgctcgaagc cgtgctcgca gatattgcag cggtcggcat cacagaggtc ctcaaccttg
     3541 gggatcatgt cagcgggccg ctggaagcgc ggcgaacagc cgacttgctg atcgagcgcg
     3601 gctttccctc catctgcggt gaccaagaca ggcggctggc caaaccagat gctgccagca
     3661 ctggcgtaac agatcgcctc gattaccagc agttggatcc taaccacctc gaatggctgg
     3721 gcaatctgcc gccgacgatg gtttatcgtg acgaggtgtt tctctgtcat gggacgccga
     3781 ggagcgacac aacctattgg ctggaccgcg tgaacgacgc ggccatcatt caagcaagcc
     3841 caatcgatga tgtcgaagcc gaagccttcg gtattgctca gtcactgatt ctgtgtgggc
     3901 acactcacat cccgcgcgtc gtacgattgc gagacggtcg ccttgtcgtc aatcccggca
     3961 gtgtcggctg cccgggatat atcggcaaaa ggcccgtcat ccatacggta cagacaggaa
     4021 cgcctaacgc ctgttacgcc attctcgaac gcagaccgct cgggtggaat gtaacgttcc
     4081 ggtatttgcc ctacgatcac atctcaatgg ccgaaatggc gagaagaaac ggactgcccg
     4141 gatgggcaag cgctcttgcc acgggctggg tcatgtgaac agtcaacaat tccggaaatt
     4201 gtttagggtt tcggatgacc atctcaagtg gtgccgtgaa cacagggccg caacatgcga
     4261 acgccacggc agcactgtcg actaggttcg ggtaaaaatt tcgcccttgc caagcacagc
     4321 catgtcgcca gcaaaccgcc gcagcggccg accgaagagc ttggcggcag gtgcgctgta
     4381 tgcgccaata aaatctgcca tcagacgggc ggcaacgaga tcgtgcacgc cgcaatcgat
     4441 gaacgtgggc gatagctcct tgcttccctc gcccagcaca atggttcctc gcctcatcag
     4501 gtagccggga aggggcccgg tacggcccac cacaaccagc gtgccggcga tcatgcggct
     4561 gcccgcatgg gcgccggcgg tgcgttccac cacgatggtg ccacgccgca tgcgatcgcc
     4621 cgcgcgctcg ccgacgctgc cgcgcaccag gaccataccg ccgcgcattc cagcgatctc
     4681 gcccgcgtcc ggcccgccca ggcgatctcc cgcgttgccg aagatttcaa tcgtgcctcc
     4741 tttcatgccg gatgcggccc acggaccaac gctgccgtgg accgtcaggc ggccgtcctt
     4801 catcaggcgc ccggtttggg tgccgacgtc accttctacc acgatctcgc cgcccgccat
     4861 ttcgtggccg atccgatcga ggcggtcgca agctccctcg atccggattt gcgcggcatc
     4921 gcccatgcgc aggcggaaaa tgtcgccgac caacacgtgt ctacgcgtcg tctgcagctc
     4981 gattctttcg atctccgccg ccgtgacgcc ggccagccga tgcggcacca gcggcgcaag
     5041 atcgagccgc tgctcgggac gctcgcgcag tgtcaggacc aggggcgtca cggcagcagg
     5101 tcccgcagat ggtagtggtg aggcccgagc ttgccaccgt aattgccggc gccaacgcgc
     5161 accgcgccgc gcttgggacc aagcctgacg acggcggcga tgccggccgc catggcggcg
     5221 gcgaccgcct cggaggtcaa tccgtcaatc acgatctcga gcacgcaagt cgcgtcagca
     5281 tcgagcgtcg tcgccactgc gccgcgtagc gtcggacaat agacgtggtt ggtcgatgcc
     5341 gacatgcctt tgtatttcga gccgaccttg gagccggatc gcacgatccc acccgggaac
     5401 ggcatgatga cgtccggcac cttcgcgatc gccgcggtcg cagcttctgc ggcggcaagc
     5461 gtcgtttgcg ctgtgcgccc catgatcaag agattgcctc cgcccaccgc cagcttggtg
     5521 agcccggtcg tggcttcgca gacgaattcg ccgtccatca ccggaattcg ccaataatgc
     5581 ttgccgccga agcgcttgga aatctgccaa ccatctccga aatagcgcaa cgcgctgccg
     5641 agccgtagcg tctcctggcc gttgagtccc gcatagcaag ccgaaccggg gctcgtgagc
     5701 acacattggg caacgcgcgc ctgcaattgc ttttgcaact cggcggtcga gattgcgaac
     5761 agcagcactc gcaccccggg acggcggtcc ggagtttgct tagccgtcaa ttcgccggca
     5821 atgccggcct cgcagccgca accgatgacc gaggtcgcaa agcccgtcat agtcagcgcg
     5881 gcttgacgcg cccagcggat gctatcggca gtgatgatcg cggcggttgc gcgcatgccg
     5941 aatgcttccg cgaaagtgtc gtcgatacgt acgcccttga ccgtcagctc gcgcatggga
     6001 ccaactcgaa tggctccggt ctcccaatcg cgtggtccgg aaccttgata agatcgtcgg
     6061 atagtccata gcgatcgtcg taataggcct tcatgcgtcg atcgatcgcc cggtcgcgcg
     6121 ccggctcgac cgaaagcgca cgtccgaagc cgcgttgcgt cagtgctcca tcgcgcacca
     6181 ccaacgcgcc gtgcttgaag accaaagcgg cagagcggaa catcttggcg cgatcggctt
     6241 cgttctcgta gacggcgaca tccgcgatcg cgcccgcccc caaatgccct cggtcccgca
     6301 atccaagcag ccgggccggc gccgcacggg tcatggtggc gatctcgacc agcgagtatt
     6361 cacggcttat ggaaggcagc gtcgttaccg ccatggcatc agggggtagc gtcgcgatcc
     6421 attgcgcacg cagatcgcgg ctcatgagca acgcaagaat ctccgggtag gcggtaaacg
     6481 gcgcgccgtt cggatggtcg gttgtgaaga acactcgcca ggggtcgtcg attagcagga
     6541 acagttccat cccaaccgcc cattgcacgg cgttgtagaa atcggccgag cggtagttgt
     6601 acgggacgat tcccgcgccg ttggcgtcgc cgtccaggat cacccacttt ctcgggcggg
     6661 cttggttgcg cgccctgaac tgccgcaata tgtcgagcga caccgtgacg gtctggccga
     6721 agatgacctg cccgacgtcg atagtgacgc tcttgttagc gttcacagcc tcggcaaggc
     6781 gcgccgccgc cgacgagaag ccgcgcttgc cctccttgcc ataaccataa aactgtaaat
     6841 gggcgagatg gagcggcaat ccatcggcag ccgcaatggt ggcgagcgct gagtccgcgc
     6901 tgcccgcgac cccaagattg ttgcagtgaa catggagcgg atgcggcaca ccgagatccg
     6961 taatggcacg ttgcagagtc ttgacaatct cgcgcgaaga cacgccgtag gacggcacca
     7021 cgtcgtcaaa ggaaaactcc cgcgcgtttt ccttgaatgc cgccgcaccg ccagcattga
     7081 tgaccttgat gccgagtgag cgcgttaccg cgagggtcca ggccgcgtag tcgctcaccg
     7141 cggcggcgct ctccttggcg cgtatcaggc cgagtagaaa atcgtcgtta ccgagtacgg
     7201 ccagcgtcgc cttgtcgatg atcggaatat cggcaagctc caggtgggca tgtagcgcgt
     7261 aatggggaga taccgcgggc tcgaccaccg tggtgaagcc catggcggca tagaggcacc
     7321 cgatctcgaa ggcgggccaa ccagcgttcg acaacggcgt tgtcccgggc cgcacggcgg
     7381 agccaaggcg gaattctggc agcagcaggc gcgcggtgtt cacgctccag ccggcgatgt
     7441 gggagtggac gtcgatggcg ccggccatga cgatcttgcc ggtggcatcg caggttgcgt
     7501 cagcacgcgc tccaggctgc gcttcgacga tgcgcccatc gcttatccaa atgtcgccga
     7561 cctcgtcgcg accgttggcg ggatcgatga tgcggccgcc cttgatgagg gtcagcatgg
     7621 caacggctcg gcggaaagct cggccgtgat ggccgcaatc gcatcggcga ccgagagggc
     7681 ctcgctccgg tgcgttgccg cgaccgccac gagggttccg atcatcgcac aatgctcgac
     7741 gctgtcatgg tcgcggccgg ggccagcgac cgcgatgtga acgcgcggcg ttttcgcgaa
     7801 cttggcatcg gccggcgtca gcgcaatggt cgggggatgg cggcgccatt ccggcaccgc
     7861 cgcccgatag gcggaaatcc acagcacgca gtcggtctcg ccgctttcca caagtcgcgc
     7921 ggcgctgtat cgccacgggg catggtccgg ataggagcgg ccgaatcccg tgcgcactgg
     7981 aaaacccgtc atccagccgc aaacctgctg tacgccgacg gcgttgtcgc cgggcgccag
     8041 cggcagcccg gaaaagcgcg tcgtcgcgtt caagtcattg acgatgccgc acagcatttc
     8101 gatcgcgagc gcatcgaggt gtgccgccga ccacaccgcg accccgaagc tggcagcctt
     8161 cagggcgtca gccagctcgt caagcgcgcg cgcgcaaacg tgacgctcgg cggcaggacg
     8221 gccgctgaca cgggcgcgca gggcggcaag cagcgcgggc aactcgccgc aatcgccgcc
     8281 gatgattgcg actttgtcgg cggcgtccgc atggtgtccg gggcacagcc aaaatatgcg
     8341 cctctcgccc ccccgaacgc tgtcgggctc gcccatcgca ccgagcagac gctgcggaag
     8401 ctcgttccac gcctcgatca ggccagcgcc taccagcagc agcgtgtcgg cccgcacgcg
     8461 cgtttcattc ggtgtcgtga gcatcacgcc cgcttgacgc atgacctcaa gatcgcgcag
     8521 cagcgagtcg gcattcatgt gatcgacggc cgccccgatg cgctgcgcca gcgcaaccgc
     8581 cgcacgggca cccgcgatat cggtgccgag gcctgcgatg agaggatgac gacttgcgtc
     8641 gatgaggcgc gcggcggcgg cgatcgcagt cggaagcgct accggcttgc catcgatcca
     8701 ggcatggtgc attgcgattc cctggctttc agcgcggtgt ttagaacgga tttctggtca
     8761 ttgaaccatt ttccgcagtc atggccgggc ttgtcgtggc ttgtcgcggc catccacgcc
     8821 ttgctttgct gaaagctcgg caagaaagac gcggatgccg gcgacaagcg gggcatgatc
     8881 gcaccggaac gcgctctagt tgtcgtactt gatataggca aaacgctgat caccggccgg
     8941 cgtcccttca agcgctccac cggtctttgc gggctgccat tggacaacct cttcgatctt
     9001 ttttgccaga tcgaaatcct tgtctgttat tcctttggct gcgtgatttt gcaggcggac
     9061 ttcgacccag gcgtaggacg ccgtgatgtc cgggtgatgc cacgccgcct cggccagatg
     9121 ccctacggta ttgatgacca tgagggtacc cttccaacta ttggtgcggt atttgcgacg
     9181 gatccagccg ttttcgagat accagtgcgg caactcgtcc ttgaggcgtg tttcaatctc
     9241 ggcatccgtg taggtgcgct ctttgctttg ttccgtcatg gggatcacct ttgaagtgtc
     9301 tcaccggtac cctgattgcc aacccagcca gggtgtcaca ttgtaagccg gtatttgttt
     9361 tcgaaaagcc cgctgaggcc aaagtgaaaa agtaagggag tgaaaccgtt gcgaagcacg
     9421 gcgagcccga tgccggtgca tataacagtc acagttccgg cgcgattaca tcttggtttc
     9481 ctcgacctaa acgggggtct cggccgccgt ttcggcagca ttggccttgc catcagcaat
     9541 ttacagacga aaatcgcact ccgtcgtgca tcgaaaaatg agatatcggg gcctgaacgt
     9601 gagcgcgtcg aacgccacat cgataagatg gtgcggcgcc tcgcgctcag cgggggccat
     9661 acggtaaatg tgctggacgt tgtcccggcc cactccggcc tcggctccgg cacccaactg
     9721 gcactggcgg tggcggccgg cattcgccac ctacatgacc tgcctctcga tattgaaggg
     9781 gatgcgatcc acctcggccg cggcgcgcgc tcaggcgtcg gtatcgggct gtttcaccga
     9841 ggcggacttg ttgtcgacgg cggctgctta gagaacgagg ttccagcccc aatcgtcagc
     9901 catatcagct tcccggatcg ctggcgaatt gttgtggtac tcgatccgac acgtcggggg
     9961 atccatggcg ccaaagaagt tgcggctttc ggcagcttgc cacctttccc ggatggcgac
    10021 gctgcccagc tctgccggct ggtgatcatg aaagcattgc ccgcggccgc cgaacaggac
    10081 attgtgagct ttggatcggc gatcaaggag cttcaggcgc gcctcggcga ctatttcgcg
    10141 gtcgcgcagg gcggaatgcg attcacaagt cccgacgtcg ccgccgtgct cgctgcgctc
    10201 gatcgcgaag gcgctttcgg aattggacaa agctcttggg ggccgaccgg attcgcattt
    10261 gcggcaacgc tggaggaggc aaaccgcctg gcgcgcatcg cgcaacggca tccgagcggt
    10321 cagggcctgg acatcagagt gtgcgcgggt ttcaatcgcg ccgccgagat tgcggttcat
    10381 tccgtcggcg tggaataaac tgttttgcaa ggagcgggtc gtggcggaca agaacatcct
    10441 tcacatgctt acccccctca agcacatgag tccgtttgac gtgaatatgg cgctcgacgc
    10501 cggttacgat gcggtcgtga cctataccaa cgtgacgctc gaggaggtga caggtctcgt
    10561 acaggacgcg attttctcgc gcccacccaa ggttggcgcg tgcaccggta tgttcttcgg
    10621 cggtaagaac gcaagccttg ctctcgacat gatggcgaaa gccaggaccg cattggtgcc
    10681 gccgttcggc atctcgttct tcgccgaccc gggcggctcg ttcacgaccg cagccgctat
    10741 ggtggcttgc atcgagaaaa ttctgcgaga cagaaagcag cgaggcttga agggagcaaa
    10801 agtcgccgtg ttcggtgcga cgggcgtgct cggattctca gtagcggcaa tctccgcgct
    10861 cgaaggcgcc gatgtcacgc tcgtgggtta cgacggcatc aagcgcgtgg agaacggtgc
    10921 cgacgagatc aagaggcagt tcggcgtcga ggtgcaggga gccgacggca gcgacgatgc
    10981 caaaaaggcc gcgctccttg gcgccacgga ggtggccgtc tgttgtggac gtgccggcgt
    11041 ccgcatcttg agccggtcgc aacttgacgc tgcgcgcggt cttttgatag ccgccgatgc
    11101 aaacgcggtg ccgccatccg gtatcgaagg ccttgaagcg atggcgaacg gcgttgagct
    11161 gacggcgcac ggagccctgg ggatcggtcc attggccata ggaaatatca aatacaaaac
    11221 cgaatcgagc ctgttcagcc gcatgataac cgccaccaaa cctgtgcaac tagacatccg
    11281 cgaggcattc gtccttgctc gcgagctcaa tgggtaacga agcggtcttg atcgccgcca
    11341 tttcgggccg tgcattggcg gtttcggcgc gccgcggcgg atatcggccg ctcgttgcgg
    11401 attttttcgg cgatcaggat accttggcgg cgacgcaggc ccacgtgtcg cttggcggcg
    11461 cgttcagata cggattccgc gagcacgaaa ttctggaggc attggagtgc ctcgccgcgc
    11521 gacatgctcc gatcggcgtg gtctgtggta gcgggtttga agaccggcca catgtggttg
    11581 cacgtctcgc gcaacgctgg cgcctgtttg gtaacagtgc ggacaccatt gcgaaagtca
    11641 aagatccgga agctttcgca gcgctttgtc gtgattgcga tattgcccat ccgaaagtct
    11701 cggtgtcgcc gccgccgacg cgcgaggact ggctggcgaa acgacgcggc ggctcgggcg
    11761 ggtctcatgt tgcgaccgcc atggcaagag aatccgacaa aggcttctat taccaactcc
    11821 gcgttccggg aacggcggtt tcggtattgc tactcgccaa tggcgtttcc gccactgtgc
    11881 tcggtttcag tacgcaatgg acctgcccga cgtcgcgtca accgttccgt tacggcggag
    11941 ctgtgcggcc cgcggacgtc gcgccgggca tggccgagcg cctttcggaa tcggcgtgcc
    12001 gcctcgcagc ggcattgtcg cttacagggc tgaacagtgc agattttatg gtggatgacg
    12061 acaatttctg gatgttggag atcaatccgc gcccaggggc gacactcgac ctgttcgaat
    12121 ccgacgcaga ttcgctgttt tctcttcaca tggcggcgtg tgccggcgac ctcgttgcgg
    12181 cgccgccgcg tcttgacggt gcaagagcat ccgcaatctt ctatgctgaa cgtaatgtcg
    12241 ttgcaccggc gcgctttgag tggccggact ggtccgcgga ccgcccgaac gcgggcgtgg
    12301 ccatcaagtc cggcgagccc ttgtgtacgg tccacgctgg cgctgccacc gcaatggaag
    12361 cacgtgcgct tgccgacgag cggctggcat tggttcgcac gtggacgcat aattgggcgc
    12421 atgaatgggc gcacgcgaat acgccatgac gaccgcgctt agcatcaata tgcgggccac
    12481 aaagctcgtc gacggtctgg tggccgacgc ggccttacta aagatcggcg tcgcgcaggg
    12541 ttcgctgggc gaaagactga tcgatgcggg aagccgcttc ccaggcggca tcgcggcggg
    12601 actgcgtata gctgaaatct gcatgggtgg attgggcgaa gtcgctgtca ctccgacggc
    12661 ggcagcgccg aattggccgt ggatgatttc cacgcgttca tccaatccgg tgattgcatg
    12721 cttggcgagc caatatgccg gctggaaact gtcgcatagc gcgggcgaca gtgcgttttt
    12781 cgcgttgggc tccggcccgg cgcgcgcact ggcccggcgc gagccgctgt tcgagaagct
    12841 cggttacacc gaccgcgcgg atagcggcac gctggttctg gaaagcacta ccggcccgcc
    12901 accaccgatc gttgaaaaga ttgcgcgtga ttgcgggctt acaccacggc aattgacaat
    12961 cattttcgct cccacccaaa gcctcgccgg ctccacgcag gttgtcgcgc gtgcacttga
    13021 agtcgcgctc cacaaggcgc tcgagcttgg ctttccgatc gagcggatcg tcgacggcat
    13081 ggccgcggcg ccgctgtgtc caccgcatcc tgatttcatt gtcgcgatgg ggcgtaccaa
    13141 tgacgctatc atctatggcg gacaggccca tttgtttgta tccggtgccg tcgccgaggc
    13201 gcgcctgctc gccgaacggc tgccgagcaa gggggcgcgc cattacggcc gctcgtttgc
    13261 ggaactcttc gagagcgtca agggcgattt ctatgcgatc gatccgatgc tgttcagccc
    13321 ggccaaggtc atcgtgacgg cgattgaaag cggcgagagc tttcacgcgg gagagctcaa
    13381 tcttggtctt ctcgatgcgt ccttctcctg aagccgtcgc cataaagccg gcagcccggc
    13441 gtccgcatgt cggtcttgtg gttgacaacg tggattggca cgcgcgcgaa ttgtcgcgtg
    13501 ccctgacggc cctgggcgcc acctcggcgc cgatcagatt gacggcatgc gggtttgcga
    13561 cgccaagcgc aaccgggctt gcgatcgacg ggctttcggg cttcctgcct gacgccatag
    13621 tggtgcgtag cctgtcgggt ggaagcttcg aggcggtgac gctgcgcctt gggatccttc
    13681 atgccgccgg cgaactcggt gtcatggtct ggaacgacgc gcgcgcgatc gagcggtgcg
    13741 tcgacaaatc gatgacaagt ttcctgctgg cacgcgccgg aattgcgacg ccaccgacct
    13801 gggctgtgga agcgcgcgag gccgctgccg ccattgtggc gcgtgaggct gccgatcgcc
    13861 ctctcgttct caagccgctg ttcggttcac aagggcgtgg attgcgattg atccgcacat
    13921 ccgacgacct gccggaaccc gccgttgtca atggcgtcta ttatttgcag cgttttgttg
    13981 gcgtcgaaca ggatggcttc cgcgacttcc ggctgctggt atccggcggg cgtgtcattg
    14041 cagccatggc ccggcattcg tccggttgga tcaccaatgt caagcgcggt gcgcggccgg
    14101 tcaccgtggt cgccaacgag gagatgcggg agctcgcact gcgcgcggcc actgcggtcg
    14161 gcgctgcttt cgccggtgtc gatcttcttt atgatgtcga cgggcgtccg accgtgctcg
    14221 aggtcaacag catgccggcg tggtccggcc tgcaaaaggt cacgccgttc aatatcgcgg
    14281 ccgcactcgc cggcgatgtg attgccgcaa taaagggacg ccgggcgcgt gggaggagcg
    14341 cgtgacgcct cggcggattg tcgccgaagc attcaccgcc gcctgccgcg acgaactcga
    14401 agcgccaaag cccggcaatg ttcatgtctt tgcgccgggc catcggatga cgacggcgca
    14461 attcatcgac agtgctgccg ctgctgtcgg tccgttatgc gccccctcca cccgcgtcgg
    14521 agttcgcatc cgaggtgcgg ttgaagcgac gcttcaggcc gttggtacca ataccaatct
    14581 tggcatcttg ctcctctgcg cccctttggc agccgccgct gaactggaag cgctcgaact
    14641 gcgcgatgcg ctcgctcgcg tgctcaatga ccttgacgtc agcgacgctg accacgcttt
    14701 tgccgcaatc atccaagcgt ctccggccgg cctcggacgc gcggagaggc acgacgtttt
    14761 tgccccggca caagtcaccc tcaagcaggc gatggccgaa gccgcagatc gcgatcgcgt
    14821 cgcacgacaa tatgcgaccg cattcgctga cgttttcgac ctcggcatga cgctgcatgc
    14881 gtccgcctcg gcgcgttggt ccgatccgaa atgggcggtg ctcgcggtct atctcggctt
    14941 catgtcgaag tttcccgaca cccatgtgat ccgcaaacat ggagccgacg ttgcgtcaga
    15001 cgtacaccgg gcagcgatga aattcgaggc gttattgtgg tcgatacagg acccgaccat
    15061 ccttctcggc gaactcctgg cgtgggacgc agccctcaag gcgcgtgcca taaaccccgg
    15121 caccagcgcc gatcttacgg tggccaccct gttcggccgt tatctgcaat ccgtcttgcc
    15181 gtcgcggcgc aagagtgatt gacttcgctg ggcgggacta tttccgctgc tatctggcta
    15241 accggtccgg cgtgtcctgc cgggcgctga caacaaggat agacgtagca acgcccgccg
    15301 gaggccttcg gcgggcgagg ggtgatgtca taatatttct cggaaggaga cggccatggc
    15361 gataataaac gggctctgcg tcggtgaatc actgatcggc gatggcaacg aggtcgccca
    15421 catcgatctc attatgggcc cgcgcggcag tgcagccgaa tcggcattcg cacacgcgct
    15481 caaaaacaat aaggacggct tcacgtcgct tctagcggtg gtagcgccga atctgctgtg
    15541 caagcccgca accgtcctgt tcaacaaggt aacgatcaag ggcgccaagc aggccgtgca
    15601 gatgtttgga ccggctcagc atgcggtcgc gaaggcggtc gccgatagcg tcgccgaagg
    15661 cgtcatcccg caggccgagg ccgacgacat tttcatttgc gtcggcgtgt tcattcattg
    15721 ggaagcgaca gacgacaaga aaatccagga tttcaactat cgcgccacca aggaggcgat
    15781 cgcccgcgcc gtcaagggcg agcccaaggc cgctgaagtc gtagcgaaac gtaacgaagt
    15841 caagcatcca ttcgcctcga actaggcaca tcccgctgaa attcatccga agcattgctg
    15901 gggctgaccc ggcaatgctt tgccatgcgc agaagataga tctgattcaa gtcggtgggt
    15961 gatcgacctc atctagacat tatccagggc ggcatttcat cgccactacc ccacttcaag
    16021 atcgatgccg cggaggcggc catcgtgaag actggtggcg acaagcgcgc ccgcaatgcc
    16081 ggcccgtttg agggcggcga gatcggcgcg gtcgcgcacg ccgccggccg catagatctt
    16141 tcgacccgcg gcgatgtcgc gtattgcgca caggcggtca agatctggcc cggcgccgct
    16201 gccgacgcga gccagcgtca tgacaatcag cctgcgaggc caagacgtcg cctcccgcag
    16261 gagggccgga ggcccctgaa aggcttgatc gcgaaaatcg agtgacagga cgatgcggtc
    16321 acattgggac aggtgctgca ccagcgccat gtccttttga ctctcgctgc cgacgacgag
    16381 atgaccaagc tccaattcga gccagttccg ggccgggagg aggtcaacta caccgttatc
    16441 gacccagaac gcaacggtcg gaaactccgc cttcagtcgc cacaatacgg cctcgttgtt
    16501 tcccgtaccg atgatggcgt cgagatcagc cacatagaat gttttgaaag gatagaccga
    16561 gtataggcct cgcatcacgt caatcggatc gctggtgggc gacagcggcg agtcgatcgg
    16621 ccgatactgg tcgcgatgac ccatgcgagc gcgcacgaca actccgcctc gcacatcgag
    16681 aaccggaatg atatccatcg accgccccca gcgcaggcta ttgcgtatat ttgtatggca
    16741 gacgaggcaa catgagcatt gtcattggat gggacattgg cggggtccac ctcaaagccg
    16801 cgcgcgcgga atccggccgt atcgtcaagg ccgtacagat tgcggctccg ttgcgcgacg
    16861 gagtcgagcg tcttaccaat gccttcgcgc gagcaaaggc cgagctgggt acggcgcaac
    16921 gccacgtcgt taccatgacg ggggaactcg ccgacacgtt cacctcacgc ccggaaggcg
    16981 tcgagtgtct cgccatggtg gccgaacgcg aactcggcgg ggccccggta tcgatctatg
    17041 cggggccggc gggttacgtt cgccccgagc aggcgcgcga tcacactggc ttggtggcat
    17101 cggccaactg gcacgcctgt gcatccttaa tcgctggcca ccgtagccat gcgctgttca
    17161 tcgatatggg atcgacgacc actgatgtcg tcccaattat ggacagaaac atcgcagcgc
    17221 gcggctatac cgatgcacag cggctggcgg cgggcgagct tgtgtataca ggcctgatcc
    17281 gcggtttcgt tatggcgagc gccaaccgcg ccccgttcag gggtgtctgg acaccgctga
    17341 ttaacgagaa tttcgccaac atggccgatg tgcaccgtat cctcggcgat ttaccggcaa
    17401 acgcagacat gatggcgacc acggatggcc gggagaagac gcgtgaagcc tcgcgggcac
    17461 ggcttgcccg catggtcggc gccgataatg ccgatgccga cgaccaagcg tggggcgctc
    17521 tggcgcaatg gtttgccgaa atgcagatgc gggccatcat cgacgccatc atgctggtga
    17581 actcgcagca tatgctgccg cccgacgcac cgctcgttgc cgccgggatc ggcgcgcata
    17641 tcgtacacga gattgcgcgc cgcatagatc gtgggtacgt cgctttcgat tcacttctcg
    17701 acatagagcc gaatgcgcgg gctaccgcat cgcaatgtgc gcccgcagcg gctcttgcac
    17761 tgctcaactc gtgacccttt cttggagcct ccagcataat gcggggtgcc ctgcggcgac
    17821 tatcgccgct gcagacataa cattgaccat caataccaga tcgctgtctg ataaaagcag
    17881 agcacgcggg cgattgcctg gccaaaacct tctcacaaaa taaccataat atatatttag
    17941 ccgactgacg ggagctaatc gctcatttgc gattcccaaa aaagctggtg gtatggcgca
    18001 cgcacctttg gacaaggcca tcctggtcga ccaatctaac cagccgtcag gacgcgacac
    18061 gtgcgtgcat ccggaacctc ggcaggtgcc ataggccgca cccaggtgcg acggtcgcac
    18121 cccggagcgg tatcatcttc ggaaatgagc tgcgaaaaca ccatttaggg ccgtgcagat
    18181 tgctggtggt caacgcctat ggagggcggt tgtgcgtgtt gcgatcgtgg ctgtagcggc
    18241 tctaatttac tggagtgaga acacgccgct caatgcaatt gaatttgtcg ccctccggtt
    18301 ctcctgcaat tgtatcgggc caactaaggc gtcggcaaac atcagaccgc ccgctatcaa
    18361 ggacagggcc gaaatcgctc tggaagcgcc gcgtcagcag gccggagaag gtgccgccaa
    18421 gcttccggat gcaacgaaaa ccaactcgcc gaagcgagag gtcgatgccg tagccgctgc
    18481 gaatttgacg aacgtcccgg tggcgattcg cgaaaactca ttcatcgcgc agctcatgcc
    18541 ggtacagtgg gaccgcgaac aagtcggccg cctcgcggtc gtgttggcgt ccacgctcct
    18601 gttgacctcg tttctgatga ttgttcacat agcccttgtc gggcgaaaat cggtgacatt
    18661 cgatccggga gtgactaccg gcagggaact tcagtcttcg cctcaagtgg aagcggaggc
    18721 ttgccgcgaa ttaatgatgc agatcaccac cgaactgatg agggcatccg gtgcagtaaa
    18781 tagtctacag gaagttccgg ccctgcaaag cgcgctacat cgtgagctta attccatcag
    18841 gcaatcgtca ggatttgctc cgcaatccgc cggcaatgca gccgaaaaga aagattggca
    18901 ccggatcaag ttacagttga tcatgagttt gcgagaaacg cggcgaatta gcgaaatcgc
    18961 ggcggcggcg cgcgtctcgt tttcatccct cccggccgcg ctgcaagatg taacgacccg
    19021 tctggaggcc tacgcttttc ttggggtcaa cgccacttcc agcgaggcag tgttgaagaa
    19081 gaccgtcgac gccctccgtc tgtgctggca ccccgacttt gccaccgacg aagaagatcg
    19141 acgccagcgc gagatgcgca ttaaacaaat taacgtggct tgggacctga tttctcgaaa
    19201 gcgaatgtcg gcatgctgat ctcggcatga ttgccgacac tatggcgcca acccaaactg
    19261 ttgcgccgcg gcgatgattc gatcccgctg ctgcttgtcg tcagcaaata cctcgaggct
    19321 acgcgcgagc gcccgtttcg cgagattggt ttcgccgagc accatgcgcg accggatcaa
    19381 tttgatccat ccatccggat cgcgcggcga ctgttcgagc cggctcgcca gaccatcgac
    19441 catcccttga atcatggcgg agcgatctgc cggcgccatc gcctctgcgg ttcgcacgtc
    19501 ctccgggctc ggtcccttct cgaccgattg agacatcggg ggcgctgctc gcgcccttag
    19561 cgcttcgagc aacccacttc cctcgaccgg cttcggcgcg gccgaacgag cggcgtcgac
    19621 gccgagatca cgctccagtg cggtgatttt gttcttaagg tccgacacca acgactcatc
    19681 agaatttaca tccttgagga gttcggtcca atcggcgaga gctgaggcct tgtcgcctcc
    19741 ttgttccttc gccagcccac tgtagaatcg ggcccgcgaa tcttttgggt caagcctcag
    19801 ggtctcctca atggcgtcct tggcgtcggc ggaaacgacg ccgtctgcgg atctgaccag
    19861 agcttcgacg cgagcgctcc taatttccgc gatatcgggg tttagctcga tcgccctcgc
    19921 atacgcctcg cccgcttcgg caaaacggcc gatactcgca taagaccagc cgagtgttcg
    19981 ccagccttcg gcgtctttcg gattttgtag caaccgtgtc gccaagcgcc tgatcatttc
    20041 atcgaccggt ggcaggttgg cttgcgatcg cagttgctgc tggttttcca aaacggacgc
    20101 ttgcggtgcc gcggcaagac tttcccggtt cgacgattcc cgagcgaacg tggaagtcgg
    20161 tcgttgcgtg gcgccagaac ccgagggcag atcagggttt ccggtcgccg catatagacc
    20221 cacagacccg agaaccacga ttccggtgac gcatataacg gcgaaattcc gttcgtcgtg
    20281 ggacagttgc ggcatcatgg gctgttccag cctgtcggca gccagtgcgc gtc
//
LOCUS       DATILV010000736         1611 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2479184, whole genome shotgun sequence.
ACCESSION   DATILV010000736 DATILV010000000
VERSION     DATILV010000736.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1611
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2479184"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            142..1437
                     /locus_tag="VLJ17_17465"
     CDS             142..1437
                     /locus_tag="VLJ17_17465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_043767036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISNCY family transposase"
                     /protein_id="HSV24807.1"
                     /translation="MTVILMSRSEIDRMNVLRDLAEERIRVSEAATLIGLGPRQVLRL
                     AKAFRQRGPAALASRRRGKPSNRSYPGVLRTEVTGIIRECYADFGPTLAGEKLAELHG
                     IRLARETIRQWMMVAGLWKDRRQRMRPVHQPRHRRDCIGELIQIDGSQHWWFEGRGPQ
                     CTLLVYIDDATSRLMHLQFVETESTFDYFEATRAYLDRYGKPIAFYSDKHAVFRVNKK
                     DAAGGDGMTQFGRALHALNIDIICANSSQAKGRVERANGTLQDRLVKEMRLRSIDTVA
                     AGNAFLPIFMADYNTRFAKAPFDERDLHRPLVGDDDLDDAFAWKEDRTVSKNLTLQYD
                     KVLFILEPNEITRSLACKRVMILDYPDGRFAIRHNGVDLPYRTFDKRPQVNQAAIVEN
                     KRLGPVLAYIAEKQKELDMSRSAKAPRRRGQRNHMFKVG"
BASE COUNT          342 a          434 c          514 g          321 t
ORIGIN      
        1 agttccggcg cgcggcgggt tatgtcgatc gcattttcaa aggcgagaag ccctgtagac
       61 gccagataga gaagtcaccg ttggccccga tagagatgtc actctccccg gttttcgaat
      121 cggatgggga gctagcggcc gatgacggtg attttgatga gccgttcgga gatcgatcgg
      181 atgaatgtac tgcgcgatct ggctgaggag cggatcaggg tttctgaggc agcaacactc
      241 attgggcttg gccctcgcca ggtgttgcgg ttggcgaagg catttcggca acgcggccct
      301 gctgctctgg cgtcgcgccg acgcgggaag ccaagcaacc gttcctatcc gggggttctg
      361 cggactgaag tgaccgggat catccgcgag tgctatgcgg acttcgggcc gacgcttgct
      421 ggcgagaagc tcgcggaact gcacggcatt agacttgcgc gtgagacgat ccggcaatgg
      481 atgatggtgg ccgggctgtg gaaggatcgt cggcaacgga tgcggcctgt gcatcagccg
      541 cggcatcgtc gggattgcat tggcgagctg atccagatcg acggatcgca acattggtgg
      601 ttcgaggggc gcggaccgca atgcacgttg ctggtctata tcgacgacgc gacgagccgg
      661 ttgatgcatc tgcagtttgt ggagacggag tcgacgtttg attatttcga ggcgacgcgg
      721 gcctatctgg atcgttatgg caagccgatc gcgttttact ccgacaagca tgctgtgttc
      781 cgggtcaaca agaaagatgc ggcgggcggc gatggaatga cccagttcgg gcgggctctg
      841 catgcgctca acatcgacat catctgtgcc aattcctcgc aggccaaggg ccgcgtggag
      901 cgtgcgaacg ggacgttaca ggaccggctg gtgaaggaga tgcggctgcg cagcatcgac
      961 actgtggcgg ctggcaatgc gttcttgccg atattcatgg ccgactacaa tactcgcttc
     1021 gccaaggcgc cgttcgacga gcgggacctg catcgtcccc tcgtcggcga tgacgacctc
     1081 gatgacgcct ttgcctggaa ggaagatcgc acagtctcca aaaatctgac gctgcaatac
     1141 gacaaggtgc tgttcatcct ggagccgaat gagatcacac gatcgctggc atgcaagcgg
     1201 gttatgatcc ttgattatcc agatggccga tttgcgatcc ggcacaatgg cgtggacctg
     1261 ccctatcgga ccttcgacaa gcggccacag gtcaatcagg ctgccatcgt cgagaacaaa
     1321 cgccttggtc cggtgctcgc ctacattgcg gagaaacaga aagagctgga catgtctcga
     1381 tcggccaagg caccgcggcg gcgtggccag cgcaatcaca tgttcaaggt cggataggcc
     1441 ggagcaaggc caccacttca acccacaacc aggaaaggcg gctatcccca actcccgaaa
     1501 aagtgacatt tctaactggc gcaaaaagtg acttctctaa atggcgcaga cagcgtcgac
     1561 gcgaccagcc ggctgatgca tttgcaattt gtggagacgg agtcgacatt c
//
LOCUS       DATILV010000737         5217 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3248515, whole genome shotgun sequence.
ACCESSION   DATILV010000737 DATILV010000000
VERSION     DATILV010000737.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5217
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3248515"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            324..1577
                     /locus_tag="VLJ17_17470"
     CDS             324..1577
                     /locus_tag="VLJ17_17470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008873011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HSV24808.1"
                     /translation="MKYNRPQATASWGTMAKDWEKGIDYDRLHKQRLARAQEAIRHAG
                     LGGVIAFNFDNIRYITGTHIGEWARDKFMRYAVCPVEGPPFLWDPAPPAKRLSSPWIA
                     DNVAAPISTMQGGLPPQMNVQGDFAKQIKKALVHFGIENEPIGIDLMELPMLRALEKE
                     GIEVVDGQQALLDAREVKTADEIELLKMACAMVDATYVDIARAIRPGTRENELVAIAH
                     DRLFRMGSERVECVNSVSGPRGRPHSHTFSDRLIQPGDMVFLDIMHSFNGYRTCYYRT
                     FICGEPNKHQIDAYETASKWISASIDMIRPGITPDQVAQVWPDAQEFGYRDEAEAFLL
                     QYGHGVGLSLWERPIISKRYTGQNTPLKEGMVFALETWKGAEDGSGAARIEEEVVVTK
                     EGCQIITNFPSDRLISCGLPGCEVF"
     gene            1581..2669
                     /locus_tag="VLJ17_17475"
     CDS             1581..2669
                     /locus_tag="VLJ17_17475"
                     /inference="COORDINATES: protein motif:HMM:NF014542.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HSV24809.1"
                     /translation="MPHTPVTILTGFLGSGKTTLLNRAMRDPAMANTAVVINEFGEIG
                     LDHALAARSDDTIMVLENGCLCCTVFGDLVITLNNLYHAREDGAIPQFDHVVIETSGL
                     ADPSPLIQAFLSDPTLAGLYHIGAMVAMVDAVNGPETLDKHIESVRQVALADHILITK
                     LDLIDGAKVAEEMLTARLRRLNPAAKISRIDDPVFEVATLLRAADPADPKADVRTWLN
                     AAAYEEHDGHHHDHAHDDLDDHDHHHGFHDRDIASFCFVRENPIPRQALQLLLDALQQ
                     NLGPNLLRVKGIVHVAEEPDRPAVIQGAQHLLHNLSWLDRWPGTDRRTKIVFITQGFD
                     RAEVEDMIAVLDRVATRTAAARARAQRG"
     gene            complement(2702..3916)
                     /gene="lptF"
                     /locus_tag="VLJ17_17480"
     CDS             complement(2702..3916)
                     /gene="lptF"
                     /locus_tag="VLJ17_17480"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR04407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HSV24810.1"
                     /translation="MALIDRYIFRTIFGGFLLILVNLTLVIWITQILRQVDLITNQGQ
                     TILVFLRITGLLVPILTMVIAPIAIVIAVCFALLKLNGDSELVVMNAAGISPRRAFRP
                     VLASCIMVAIFVAYISAFLAPWLQRKMALEITKVRTDVVSNIVRPGAFTSVDRGLIFH
                     IRERRGENQFQGVFIDDARTPEERVTIVAEYGQIVQRADSSFLIMRDGNVQRRRAKER
                     DPTIVVFDQYAFDLTRLAPSPQVNVGLREKYVWELAFPAADDPVFKLSPSQFRVELHE
                     RLFAPLYPLAFGVIAFAILGFPRTTRQSRAVSMFVVIAAVSVLRLGGFAGTAIAATTP
                     AMLAVVYAMIAAAIGIGGFVIWRGIPIDLDEKLDFAAIARVGLVRLDRIATRLHLRLP
                     TQDILRRFENSD"
     gene            4347..4733
                     /locus_tag="VLJ17_17485"
     CDS             4347..4733
                     /locus_tag="VLJ17_17485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24811.1"
                     /translation="MAGSWQALNHQPTFNTSTMILLSDGRVMVQEEATAHWHALTPDS
                     HGSYVNGTWSPLADMSFWRRYYASGMLKDGRVVLIGGEQSGAGGDRNRGKSTILYPIA
                     GARFLRPPDGRLSGMLLAAFCPTAIL"
     gene            4730..5119
                     /locus_tag="VLJ17_17490"
     CDS             4730..5119
                     /locus_tag="VLJ17_17490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24812.1"
                     /translation="MIGALPTPRCAIYDATSDTRLPAASKAVRSNEETWVLLPDDTMV
                     TVQCFSPYRSERYSISSNSWKDEGPLPVTIVDPVMHEIGPAMLTYDGKVIYFGAADVS
                     GRGRTVIYTPPPIYTGTGTWAHASAAM"
BASE COUNT         1087 a         1597 c         1558 g          975 t
ORIGIN      
        1 gcggtcggtc agctcggcga cagcagtcct tacattgccc aggacctcgc gtgccttgtc
       61 cacgttgcgg acgacgcaaa ccagatcctg gcccaaggct ctaagctcct tgaccaccgc
      121 ccgcccggta tttccagtcg caccgacaac agcaatcatc gtttccgttc ctctactcaa
      181 aagagctcgt ttcggccggc actatcaaac atttttccca tattgaaaat ccctgttcgc
      241 ggcggacgcc ttgcgctaag tgtcctgcga gatcgaacct ttgatggacc gctccgctcc
      301 tgcgaaatcg cgaggactga ccaatgaaat acaaccgacc acaagcgacc gcgtcttggg
      361 gcacgatggc caaggactgg gagaagggga tcgactatga ccgcctccac aagcaacgcc
      421 tcgcgcgcgc gcaggaagcg atccggcatg cgggcctcgg cggcgtgatc gcattcaact
      481 tcgataacat ccgctatatt accggcaccc atatcggcga atgggcgcgc gacaagttca
      541 tgcgctatgc cgtatgtccg gtcgagggcc cgccgttcct gtgggatccg gcgccgccgg
      601 ccaagcgtct gtcttcgccc tggattgccg acaatgtcgc ggcgccgatc tcgacgatgc
      661 agggcgggtt gccgccccag atgaatgtgc aaggcgactt cgcgaagcag atcaagaagg
      721 ccctcgttca tttcggcatc gagaacgagc cgatcggcat cgatctcatg gaattgccga
      781 tgctgcgcgc cttggagaag gagggcatcg aggtggtcga cgggcagcag gcgctgctcg
      841 acgcgcgcga ggtcaagacc gctgacgaga tagaattgct gaaaatggcc tgcgccatgg
      901 tcgacgcgac ctatgttgac atcgcccgag ccatccgccc tggtacgcgc gagaacgagc
      961 tggtggcgat cgcccatgac cgcttgttcc ggatgggctc ggagcgcgtc gagtgcgtga
     1021 attcggtgtc tggcccgcgc ggccggccgc attcgcacac gttctccgat cgactgatcc
     1081 agccgggcga catggtgttc ctcgacatca tgcactcgtt caatggatac cggacctgct
     1141 attaccgcac cttcatctgc ggcgagccga acaagcacca gatcgacgcc tacgagaccg
     1201 cgtcgaaatg gatcagcgcc tcgattgaca tgatccgccc agggatcacc cccgatcagg
     1261 tggcgcaggt gtggccggat gcgcaggaat tcggctaccg cgacgaggcc gaagccttcc
     1321 tgctgcaata tggccatggc gtcggtctgt cactgtggga gcggccgatc atttccaagc
     1381 gatataccgg ccagaatacg ccgctcaagg aaggcatggt gtttgcgctc gagacctgga
     1441 agggggccga ggacggctca ggcgcggcgc gcatcgagga agaagttgtg gtgaccaagg
     1501 aaggctgcca gattatcacc aatttcccgt cggaccgtct gatttcatgc ggattgccgg
     1561 gctgcgaggt gttttgaacc ttgccccaca cccccgtcac catcctcacc ggcttcctgg
     1621 gcagcggcaa gacgaccctg ctcaaccgcg ccatgcgcga tcccgcgatg gcgaacaccg
     1681 cggtggtgat caacgaattc ggtgaaatcg gcctcgatca tgcgcttgca gcgcgcagtg
     1741 acgacaccat tatggtgttg gagaacgggt gcctatgctg caccgtattc ggcgatctcg
     1801 taatcaccct gaacaacctc tatcacgcgc gcgaggacgg cgcgattccc cagttcgatc
     1861 acgtggtgat cgagacatcg gggctggcgg atccgtcgcc gctgatccag gctttcttgt
     1921 ctgacccgac gctcgctggg ctctatcata ttggtgccat ggtggcgatg gtcgacgccg
     1981 tcaacggtcc tgagacgctg gacaagcaca tcgagtcggt tcgacaggtc gcgctcgccg
     2041 atcacatact gatcaccaag ctcgatctca ttgacggtgc aaaggtggcc gaggagatgt
     2101 tgaccgcacg cttgcgccgc ctcaacccgg cggcaaagat ttcgcgaatc gatgatccgg
     2161 ttttcgaggt cgcgaccctg ctgcgcgccg ccgatccggc cgatcccaag gccgacgtcc
     2221 gcacgtggct caatgctgcc gcctacgagg agcatgatgg acatcaccat gatcacgcgc
     2281 acgacgacct tgacgatcat gatcaccacc acggctttca cgaccgcgat atcgcatcct
     2341 tctgcttcgt gcgcgaaaat ccgatcccgc gccaggcgct gcagctactg ctcgacgcgc
     2401 tacagcagaa tctcggtccc aatctgttgc gggtaaaggg aattgtccac gtcgccgagg
     2461 agcctgaccg gccggctgtg atccagggcg cgcagcatct tctccacaac ctgtcctggc
     2521 tcgaccgctg gccgggcacc gaccgccgca ccaagatcgt gttcatcacg caggggtttg
     2581 atcgcgccga ggtcgaggac atgatcgcgg tgcttgaccg ggtcgcaacg cgcacggccg
     2641 cggcccgcgc ccgggcccag cgcggctgaa agtctcaggt cgtcttcact gaagtgatgc
     2701 ctcaatcgga attctcaaac cgtcgcaata tatcctgggt cggcaagcgc aggtggaggc
     2761 gagtcgcgat gcgatcgaga cgaacgaggc caacgcgcgc gatcgcagca aaatcgagct
     2821 tctcgtcaag atcgatcggg atgccgcgcc atatcacgaa gccgccgatc ccgatagcgg
     2881 ccgcgatcat ggcatagacg accgccagca tggcgggcgt ggtggccgca atggcggttc
     2941 cggcaaagcc gccgagccgc agcaccgaca cggccgcaat cacgacaaac atcgatacgg
     3001 cccggctttg ccgtgtggtg cgcgggaagc ccagaatcgc gaatgcaatg acgccgaatg
     3061 ccaggggata gagcggcgcg aacaggcgct cgtgcagttc gacgcggaac tgtgagggcg
     3121 aaagcttgaa caccgggtcg tcggcagccg gaaacgcaag ttcccagacg tatttttcgc
     3181 gcaaacctac gtttacttgc ggtgacggcg ccagccgcgt caggtcgaag gcatactggt
     3241 cgaacaccac gattgtggga tcgcgttcct tggcgcggcg gcgctgcaca ttgccgtcgc
     3301 gcatgataag aaaggagctg tcagcccgct gcacgatctg gccgtattcg gccacgatag
     3361 tgacgcgctc ctcgggcgtg cgcgcatcgt cgatgaaaac cccctggaac tggttctcgc
     3421 cgcgccgctc gcgaatatga aagattagtc cgcgatcgac cgaggtgaaa gcgcccggcc
     3481 ggacgatatt agaaaccaca tccgtccgca ccttggtgat ctccaaagcc atcttgcgtt
     3541 gcagccacgg ggccagaaag gccgaaatat aggcaacaaa gatcgcaacc attatgcatg
     3601 aggcgagtac cggacgaaac gctcgccgcg gcgaaatgcc ggccgcgttc atcaccacca
     3661 gctcggaatc gccgttaagc ttgagcagcg cgaagcaaac cgcgatcacg atcgcaatcg
     3721 gggcgatcac catggtcagg atgggcacca gcaggccggt gatgcggagg aacaccagga
     3781 tggtctggcc ctgattggtg atgaggtcga cctggcgcag aatctgcgtg atccagatca
     3841 ccaaggtcag gttgaccagg atcagcagga agccgccgaa aatcgtgcgg aatatgtagc
     3901 gatcgatcaa ggccatgctg catttctatc tgcgccgggg cggcgcacgt gtcccggaaa
     3961 cgaagatcag tgttgagccc gacgtatgat gccccattcg cattataccc catttgcgga
     4021 tccgcatcca acctccgccg tgacttcccc caaaccgcca cccccccccc atcagggcag
     4081 ggtaatcgcg tttggcacgc cgctcgagcg gctcttaaca tggccccagc gattttgccg
     4141 ggatatcaaa ctacagcaga gatgtcatgg cgagttgccc attgtctcgc aattcgaaca
     4201 aagagtgtga gcggcctcac acacgatcag caggcctatg tgctaccgat tgcactcaag
     4261 attgatccgt aatcttcgga tgcggaattt ctgtagagat gaattgcagc aaaagatcgt
     4321 aatgcgtggg cgaacggagg ttcgctatgg caggttcctg gcaagctctt aatcatcagc
     4381 cgacattcaa tacgagcacg atgatccttc tttccgatgg aagggtcatg gtccaagaag
     4441 aggcaacggc gcattggcat gcgctgaccc ccgacagcca cggcagctac gtcaatggca
     4501 cgtggtcacc tctcgccgac atgagcttct ggcgacgcta ttatgcctca ggaatgctca
     4561 aggatggacg cgtcgttttg attggtggcg agcagagcgg tgcaggaggt gataggaaca
     4621 gggggaaatc tacgatcctg tatccgatag ctggagcccg attccttcgc ccgccggatg
     4681 ggcgactgtc ggggatgctg cttgctgcat tttgcccaac ggcgatctta tgatcggcgc
     4741 gctcccgacg ccgcgatgcg ccatctatga tgcgaccagt gacacccggc tgccggctgc
     4801 gagtaaggct gttcgctcga acgaggagac gtgggtcctc cttcctgacg acaccatggt
     4861 cacggttcaa tgcttctcgc catatcgttc cgaacgatat tccatctcct cgaactcctg
     4921 gaaggacgag gggccgctcc ctgtcaccat cgtcgatcct gtcatgcacg agatcggccc
     4981 tgccatgctg acatatgacg gcaaggtgat ttatttcggt gcagccgacg tgagcgggcg
     5041 ggggaggacg gtgatttaca cgccgccccc gatctacacc ggcaccggaa cctgggcgca
     5101 tgcaagtgcg gcgatgtagg cgatgcgagc gggcccgaaa acgtcgcact ccatcaggag
     5161 gttcgtaggc tctcaagagc tgtcgatcgc ctttctcctc tcatcaagat cgagcca
//
LOCUS       DATILV010000738         1626 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_174221, whole genome shotgun sequence.
ACCESSION   DATILV010000738 DATILV010000000
VERSION     DATILV010000738.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1626)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1626)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1626
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174221"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..551)
                     /locus_tag="VLJ17_17495"
     CDS             complement(<1..551)
                     /locus_tag="VLJ17_17495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24813.1"
                     /translation="MSSFRRFLSRPFGWLIVVAGFLCLAVPLVWATMVIYYSNLPWAV
                     VRIGLAAAFAAFAIWALWFSRQRSMSVLAVVLFLGVVVWWISIRPSHDRNWRPEVAVM
                     PRATIDGDHVHLTGVRNFQYRSRNDFTVGYQERDVLLSHLVALDFYVSYFTEGPVGHT
                     FLSFIFDNAPPLSISIETRPEVG"
     gene            809..1543
                     /locus_tag="VLJ17_17500"
     CDS             809..1543
                     /locus_tag="VLJ17_17500"
                     /inference="COORDINATES: protein motif:HMM:NF017672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA];
                     GO_process: GO:0006672 - ceramide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ceramidase domain-containing protein"
                     /protein_id="HSV24814.1"
                     /translation="MTIGSFVRARPVPVLYGLMIASLVALLPLPPLLQNQAYHQFADQ
                     RELFGIPNFWNVVSNLPFVAVGAVGLLRFHRDVTTTVLFAGIFLTGFGSSYYHLDPND
                     STLFWDRLPMTICFAAILSAVVEERVDAKAGAMLLRPLLAIGIFSLLLWRWTDDLRLY
                     AWAQFFPFLVLVLILRLFPPKYTGTSYWVIAAALYALAKLLEFLDEKIYSLGSIVSGH
                     TLKHLAAAAASLAILRLLQTRRPIAP"
BASE COUNT          325 a          470 c          473 g          358 t
ORIGIN      
        1 tcaccgacct cgggccgggt ctcgatggaa atactcaacg gcggcgcgtt gtcgaagatg
       61 aagctcaaga aagtgtgtcc gaccggcccc tcggtaaagt aggacacgta gaaatcgagc
      121 gcgaccaggt gcgacagcag cacgtcgcgc tcctggtagc ccaccgtgaa gtcattccgg
      181 gagcggtatt ggaagttgcg tacgccggtc aggtgcacgt gatcgccatc gattgtggcg
      241 cgcggcatga cggcgacttc cggtcgccag ttgcgatcgt gcgagggacg gatggagatc
      301 caccagacca cgacaccgag aaacagcacg acggccaaca cggacatgct acgttggcgg
      361 gagaaccaga gcgcccagat tgcgaacgcc gcgaatgcgg ccgccaaccc aatgcgcacg
      421 acggcccacg gcaaattcga atagtagatg accatggtgg cccagacgag aggcacggcc
      481 aggcacaaaa agccggcgac cacgatcagc cagccgaaag gtctggagag gaatctgcgg
      541 aacgaactca ttgcttctcc ggctagttga accagcgagt cgccgctcgg aagggcgcca
      601 aggcgtgtgc catgtcacga tggacggaat ggtgggaaag gtataccgac cagacttctc
      661 ttgttaagag cgctcgggta gatcagggct cgttcatgtc catccgggat aactttgagt
      721 ccttggcatc gatcggtatg gcggatccgc gaagatctcg tgcggtccgc tcgtttcgaa
      781 ggcgcgatct aagaaggcaa attattaaat gaccatcgga agcttcgtcc gagcccgtcc
      841 cgtcccggtt ctgtacgggt tgatgattgc ctcgctcgtg gcattgctgc cgcttccgcc
      901 gcttttgcag aatcaggcct accatcagtt cgccgaccag cgcgaattgt tcggcatccc
      961 aaacttctgg aatgttgttt caaatctgcc attcgtcgct gtaggcgcag tcggtttgct
     1021 gcgatttcat cgcgacgtga cgactaccgt gctttttgcc ggaatatttc tgaccggctt
     1081 tggctcgtcc tactatcatc tagatccgaa cgacagcacc ctgttttggg atcggctgcc
     1141 catgaccatc tgtttcgccg ccatcctttc cgccgtcgtc gaggagcgcg tcgatgcgaa
     1201 agcgggcgcg atgctgttgc ggccgctgct ggccatcggc attttcagcc ttttgctatg
     1261 gcgttggacc gacgatttgc ggctttatgc ttgggcgcag ttctttcctt ttctcgtctt
     1321 ggtcctgatc ctgcggctgt ttccaccgaa atataccggc acaagctatt gggtgatcgc
     1381 tgcggcgctg tatgcgctcg ccaaattact ggaattcctt gacgagaaaa tctattcgct
     1441 cggctcaatt gtgagcgggc atacgctcaa gcacctcgcc gcggccgccg ccagccttgc
     1501 aatcctgaga cttttacaga cccgccgacc gatcgcgcca taatttctcg gctggagcgg
     1561 tcgatctgaa atatcagttt gggtcagccc cctttggttt tttccgcttg gcgacacgcc
     1621 gcagcg
//
LOCUS       DATILV010000739         2754 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1712782, whole genome shotgun sequence.
ACCESSION   DATILV010000739 DATILV010000000
VERSION     DATILV010000739.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2754)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2754)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2754
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1712782"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..499)
                     /locus_tag="VLJ17_17505"
     CDS             complement(<1..499)
                     /locus_tag="VLJ17_17505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B'"
                     /protein_id="HSV24815.1"
                     /translation="MAETTAHTEAPAGHAKFPPFESEHFPSQLVWLAISFVLLYVLMS
                     RIALPRIGGIMAARSKIIGDDLAAAEQLKERSNAAQAGYEKALADARGRAQAIAGATR
                     QQQARETDDLHKRLEAQLHERIVAAEQSIAKSRDAAMSNVRSIAAETASAIVERLIGQ
                     RPRDED"
     gene            complement(542..769)
                     /locus_tag="VLJ17_17510"
     CDS             complement(542..769)
                     /locus_tag="VLJ17_17510"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HSV24816.1"
                     /translation="MDPIAAKFIGAGIACIGMGGAGVGVGIIFGNYLAAALRNPSAAQ
                     GQFGNLIFGFAITEALGIFSLLIALLLLFGL"
     gene            complement(812..1561)
                     /locus_tag="VLJ17_17515"
     CDS             complement(812..1561)
                     /locus_tag="VLJ17_17515"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HSV24817.1"
                     /translation="MTDPIHQFNIIKLATLGEVAGYEIAFTNSALYMVITVAAITTLL
                     VGATSRRALVPGRLQSVAEISYEFVANMLRSTAGTEGMKFFSLVFSLFLFILFANVIG
                     LIPFTFTVTSHIIITASLASLVFCTVLVYGFRKHGLRFFKLFVPSGIPLYILPLVVFI
                     EMMSFVSRPISHSVRLFANMLAGHITLEVFAGFIPMLGGFGVLGWLGATIPLALVVAL
                     TALEVLVAFLQAYVFAILTCIYLNDAINPGH"
     gene            complement(2233..>2754)
                     /locus_tag="VLJ17_17520"
     CDS             complement(2233..>2754)
                     /locus_tag="VLJ17_17520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008973499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HSV24818.1"
                     /translation="ELADAQYDLDQSVTRAPAAGFVTQVALRPGMYVVPAPLRPVMVF
                     VNTDERDKALGAAFQQNALQRVKAGDEAEVAFDAVPGQVFKCKVRLVLDAIAAGQIQA
                     TGALVDFSTRTTGGRALALIDIKDDISGYQIPLGAAGEVAIYTEHWHHLSLLRKILLR
                     MRSWQNYIFIEGH"
BASE COUNT          624 a          815 c          804 g          511 t
ORIGIN      
        1 cgtcctcgtc gcgcggccgt tgcccgatca gacgttcgac gatggccgaa gcggtctcgg
       61 cggcgattga ccttacattg ctcatcgctg cgtcgcggct ttttgcgatc gattgctcgg
      121 ctgccactat ccgctcgtgg agttgtgcct cgagccgctt atgcagatca tcggtttcgc
      181 gggcctgttg ctggcgcgtg gcgccggcaa tggcctgggc gcggcctctc gcgtccgcaa
      241 gcgccttttc gtaacccgct tgcgcggcgt tcgaccgctc tttcaactgc tccgccgccg
      301 cgagatcgtc gccgatgatt ttgctgcgtg ccgccatgat gccgccgatg cgcggcagcg
      361 caattctcga catcagcacg tagagcagga cgaagctgat cgccagccag acgagctgtg
      421 acggaaagtg ctcagattcg aacggcggga acttggcatg tcccgcggga gcttcggtat
      481 gggcggtcgt ttcggccatg atgtctgcct tggcagccgg cagtacgatt gtcccgccgc
      541 cttacagccc gaacagcaac aacagcgcga tcagcaacga gaagatgccg agcgcttcgg
      601 tgatggcgaa gccgaaaatc aggttgccga attgaccttg cgccgccgag ggattgcgca
      661 acgccgccgc aagataatta ccgaaaatga tacccacgcc gacgccggcg ccgcccatgc
      721 cgatacaggc aatgccggcc ccgatgaact tagcggcgat cggatccata aggtcactcc
      781 ttttcgaggt tgatgtgaga gttctggcgg atcaatgccc ggggttgatc gcgtcgttca
      841 ggtatatgca ggtcaggatg gcgaacacgt aggcttgcag aaatgcgacc agcacttcca
      901 acgcagtgag cgccacgacg agcgccagcg gaatagtcgc gccgagccag ccaagcacgc
      961 cgaagccgcc gagcatggga atgaatccgg caaagacctc gagcgtgata tggccggcga
     1021 gcatgttggc gaacagccgc acgctgtgcg agatcggccg cgacacgaag gacatcatct
     1081 cgataaagac aacaagcggc agaatgtaga gcgggatacc gctcggaacg aacagcttga
     1141 agaaacgcag tccgtgcttc cggaaaccat agacgagcac ggtgcagaac acgagcgacg
     1201 cgagcgaagc agtgatgatg atatggctcg tcactgtgaa cgtgaacggg atgaggccaa
     1261 tcacattcgc gaacagaatg aacaggaaca gcgaaaaaac caaagagaag aacttcatcc
     1321 cctcggtgcc ggccgtactt cgcagcatgt tggcgacgaa ttcgtaagat atctccgcga
     1381 ccgattgtag ccgtccgggc acgagcgcac gacggctggt cgcgccgaca agcagcgtcg
     1441 tgatggcggc gacggtaatc accatgtaaa gggctgagtt ggtgaaggcg atctcgtacc
     1501 cggcaacctc gcctagcgtg gccagcttga taatattgaa ctggtggata gggtcggtca
     1561 tgatcggaac cagattgaac gctgcgatcc aacgacgggc atcggcacgt cccctcccct
     1621 acagtcatcg gaagaattct ttcacaattt tccgcatttt ttcttcaaac gagcatcatt
     1681 cgcagctcac acgaatgccc gcgttcgtca ctctgcaaac gtcactctgc aaatttccgc
     1741 ggatcaggat gcgctatcag gcggcaagcc gctatgcgga aatgatgtgc aagaaatggc
     1801 ccgcgtccga tctttgacga gctgcgcgcg ctcacagcgt tacacggagc cgcggcggcg
     1861 cccgcgtcaa gacgatgttg ggctgctgag gaaggaacgg attttcggcc tcaagccgga
     1921 accacgactt gaagagatcc gcgacgaacg ttccaagcaa acgggaccgc gctctcaacc
     1981 tttcccgatc aaattggacg ccttcctccg acagcgcgca attacagagc gaaatggcct
     2041 tattgcaatt acgaatacaa tgagcggaat cagtaacaat ccaaacaatg cccgaatgag
     2101 cataaagtta ggagagtctt cagctacgaa caaggcgggc acaaatgcaa tatcgccagg
     2161 acaccttcag caatccaatc gagcacggct tcctccatgc gtcatggcgc gaggccaagg
     2221 ccttgaaagc tctcagtgtc cctcgatgaa gatgtagttt tgccaactgc gcatgcgcag
     2281 caagatcttg cgcagcagcg acaggtgatg ccagtgttct gtatagattg cgacctcgcc
     2341 agcggcgccg agcgggattt gatatcccga gatatcatcc ttgatgtcga tgagagccag
     2401 cgcccgaccg cccgtcgtcc gcgtgctaaa atccacgagc gctccagtcg cttggatttg
     2461 gccagccgca atcgcatcca ggacaagacg taccttgcac ttgaagactt gaccgggcac
     2521 ggcgtcaaag gcgacctcgg cctcatcacc ggccttgacc cgctgcaagg cattttgctg
     2581 gaatgccgcc ccgagtgcct tgtcgcgctc gtcggtattg acgaagacca ttaccggccg
     2641 caacggcgcg gggaccacat acattcccgg ccgcaaggcc acctgggtga cgaatccagc
     2701 ggccggcgcc cgcgtcacgc tctgatcgag gtcgtattgg gcatcggcca actc
//
LOCUS       DATILV010000740         2738 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1457558, whole genome shotgun sequence.
ACCESSION   DATILV010000740 DATILV010000000
VERSION     DATILV010000740.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2738
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1457558"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(202..1902)
                     /locus_tag="VLJ17_17525"
     CDS             complement(202..1902)
                     /locus_tag="VLJ17_17525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HSV24819.1"
                     /translation="MSSAIAFLKNRVGFSAPVEGWFVAVITLIHIAAFAIMLWSEADV
                     LARAIFVLAWGFLNFVWLTILRRPALSAATSLAMIVVLILLSRFKYDLLFMTASFVDI
                     MIIDADTFAFLMTASPDLRYAVAGALLVAVPTLVLLWRLDPFRVGRHAASIGGATCLV
                     GFTCLSLAFPIAPHTAFYGGDYVSSFVGSGVAAISELMAHGFMESDPVSADRLEPTKG
                     ETCQTAGRRPHIIMVHDESSFDITAAPGVAVPAGYRRHFVSFDGRSRNFAVEGAGGPS
                     WYAEYNVLAGLSAKSFGHFAYFVTQIAANRVERGLPRTLARCGYQTYTLYSWPGAFLG
                     ARSFYKSAGIEHFIDAKDMGTSGLEPDRFFYDQALHIIERDRSKDPLFIFVCLAANHF
                     PWSYRYRPELTPQWRALGNEPKVDEYVRRQTISAHDYAEFLGRLKREFPGEAFLVVRY
                     GDHQPEFAMNILDPELDEAAIARRIETRDPRYLTTYYAIDAVNFIPADVSSALDTLDA
                     AYLPLVVLEAAGVPLDPSFAEQKKILQRCGGAFRRCAGGAEARRFNRLLIDAGLIKGL
                     "
     gene            complement(2157..>2738)
                     /locus_tag="VLJ17_17530"
     CDS             complement(2157..>2738)
                     /locus_tag="VLJ17_17530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012029680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1080 domain-containing protein"
                     /protein_id="HSV24820.1"
                     /translation="AMGLLFTGSAILWHAHSALGQAEQTGWTTLFDGSNLNNWEPIGN
                     ANWRLVEGGVAQADVGNGFLVSKQEYGDFQLRAEFWVDATANSGVFIRATDPKQVTAT
                     NAYEVNIYDTRPDPSYGTGAIVNVAKVSPMPKAGNQWNTYEITAKGPEFTVILNGIKT
                     VDGAKDAKHVKGRIALQYGGGIVRFRKVEIRPL"
BASE COUNT          596 a          788 c          847 g          507 t
ORIGIN      
        1 gccaatctgg atcgaagggt ctcggcgttg cgacgttccc tcctccgttc cctaaagcga
       61 ggcacagcac gtacacacgc ttctattaaa tccgacctgc gaaggttctc gcctttgttc
      121 gaaacgcaca caatcttaga aacccaaaca cgagccactg cccatgcact tgcgcgacgc
      181 gagatgtcgg cccccgatcg gctatagacc cttgatcagg ccggcatcga tcagcaatcg
      241 attaaagcgc cgagcctcgg ccccgccggc gcagcggcgg aaagcgcccc cgcagcgctg
      301 gaggatcttc ttttgctcgg caaaggaggg atcaagcggc acgccggcag cttccagcac
      361 gaccagcgga aggtaggcgg cgtcgagcgt atcgagagcg gaggatacgt cggccggaat
      421 gaaattgacg gcgtcgattg cgtaataggt ggtcaggtag cgcggatcgc gcgtctcaat
      481 gcgtcttgca attgcggcct cgtcgagttc cggatccagg atgttcatcg cgaattccgg
      541 ttggtggtcg ccgtagcgca cgacaagaaa cgcttcgcct gggaattccc gcttgaggcg
      601 gccgagaaac tccgcatagt catgcgcgct tatcgtttgc cgccgtacat actcatcaac
      661 cttgggttcg ttgccgaggg cgcgccattg cggcgtgagt tccgggcgat agcggtagct
      721 ccacggaaaa tggttggctg ccagacacac gaagatgaaa agcgggtcct tgcttcggtc
      781 gcgttcgatg atgtgtaggg cctgatcgta gaagaaccgg tcgggctcca gtccgctcgt
      841 gcccatgtcc ttggcgtcga taaaatgctc tatgccggcc gatttgtaga aactgcgtgc
      901 accgaggaag gcgcctggcc aagaataaag ggtataggtt tgatagccgc aacgcgcgag
      961 cgtacgcggc aggccgcgct cgacccggtt ggctgcgatc tgggtgacga aataagcgaa
     1021 atgtccgaac gatttcgcgg aaaggccggc gaggacgttg tattcggcgt accaactcgg
     1081 accgccggca ccttcaacgg cgaaatttcg gcttctgcca tcgaacgaca cgaaatggcg
     1141 gcgatagccg gcggggaccg caaccccagg cgctgccgta atgtcaaagc tcgactcgtc
     1201 gtgcaccatg atgatgtgcg ggcgtctgcc agccgtctgg caggtctcgc ccttcgttgg
     1261 ttcaagccga tcggcactca cggggtcgga ttccatgaat ccgtgcgcca tcaactcgga
     1321 gatggcggcg acacctgatc cgacgaagct ggaaacgtag tcgccgccat agaaggcggt
     1381 gtgaggcgcg atcggaaagg ccaatgacag acaggtaaac ccgaccaagc aggtggcacc
     1441 gccaatcgat gcggcgtgcc gcccgacacg gaatgggtca agccgccaaa gcaggacgag
     1501 cgtcggaacg gcgaccagga gcgctccggc aacggcgtag cggaggtcgg gggacgctgt
     1561 catgaggaat gcgaaagtat cggcgtcgat gatcatgatg tcgacgaagc tagccgtcat
     1621 gaacagaagg tcgtacttga atcgcgaaag cagaatgagg acgacgatca tggcgagcga
     1681 cgttgccgcc gacagggcag gccggcgcag aatcgtaagc cagacaaaat tcaggaaacc
     1741 ccaggcaagg acgaaaattg ccctggcgag gacgtcggcc tcggaccaca gcatgatcgc
     1801 aaaggccgca atatggatca acgtgattac ggcgacgaac catccttcaa cgggcgccga
     1861 gaaaccaaca cggttcttta ggaaggcaat agcactcgac atagacgaat gtcttgggac
     1921 accccaaacg atcccgaacc gacattaaca ataacccctt cccgtctttc ctggaagact
     1981 gatgcaccaa acgccgcatc ttgcggagct tgtgcaccgc aacaccaacg cacgagtcag
     2041 caatagcctg cgatttgccg ccgaatccgg caccccgcga gtggagggcc ggctcggacg
     2101 tttgcatgag gtttgagcag gcgcggcaaa agcttatgcg taaaagctta tgcgtatcag
     2161 agcggcctga tctcgacctt gcggaatctc acgataccgc cgccgtactg gagcgcgatc
     2221 cgccccttaa cgtgcttggc gtccttggcg ccgtcgactg tcttgatgcc attgaggatc
     2281 acggtgaatt ccgggccctt ggcggtgatc tcataggtgt tccactggtt gccggccttg
     2341 ggcatgggcg acactttggc gacattaacg atcgctccgg tgccgtagct cgggtcaggg
     2401 cgcgtatcgt atatgttgac ctcataggca tttgtggccg tgacctgttt gggatcggtg
     2461 gcgcggatga agacaccgct attggcggtg gcatcgaccc agaactcggc cctgagttgg
     2521 aagtcgccgt attcttgctt cgagaccagg aagccgttgc ccacatcggc ctgagcgacg
     2581 ccgccttcga ccagccgcca attggcgttg ccgatgggtt cccagttgtt gaggttggac
     2641 ccgtcgaaca gcgtggtcca ccccgtctgc tcggcttggc ccaaggcact atgtgcgtgc
     2701 cagagaatgg cggagccggt gaaaagcagc cccatggc
//
LOCUS       DATILV010000741         1531 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_175180, whole genome shotgun sequence.
ACCESSION   DATILV010000741 DATILV010000000
VERSION     DATILV010000741.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1531
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175180"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..190
                     /locus_tag="VLJ17_17535"
     CDS             <1..190
                     /locus_tag="VLJ17_17535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24821.1"
                     /translation="GFNFDRYDRELRRPFPSEPQFAPDSKIWHREHAVADEARPATPG
                     RDKVPVATTSYGQRLEFQ"
     gene            complement(268..414)
                     /locus_tag="VLJ17_17540"
     CDS             complement(268..414)
                     /locus_tag="VLJ17_17540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24822.1"
                     /translation="MTAIVPLSLPGAYPDFLRKHRAYIDEKLEIFDGQAIHPEKTSLA
                     GPVP"
     gene            complement(411..1250)
                     /locus_tag="VLJ17_17545"
     CDS             complement(411..1250)
                     /locus_tag="VLJ17_17545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007538364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HSV24823.1"
                     /translation="MAIHTVEPAVRQIARRTRGRKHGPVARLISPSDDFGEILKPFVF
                     LDYLDHDVREPITSGLHPHSGIATVSHLTEGSVNYIDPDNVTGILPAGGVEWMQAGRG
                     MWHGGSIDAPGRMRGFQLWIALPPHLELGPTISIYQSPAEIPVEGPARVLLGRYGSAS
                     SVITPPSPINYLSVRLRAGDRWIYEPPAGHTVLWTAIALGTVFASEVLRAGDLAAFDS
                     SNESIEFEASSDAEFVVGSAAPHNHNLVLGDYSVHTSPEALHAGQERILEIRKRLIQE
                     GRL"
     gene            complement(1320..>1531)
                     /locus_tag="VLJ17_17550"
     CDS             complement(1320..>1531)
                     /locus_tag="VLJ17_17550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24824.1"
                     /translation="GLVAKSAETYAERLVPLLVCPDLEGHSGAMFDPKGFAIFPSPKL
                     TEDYTKKFIGASEALVSRTSIRVAS"
BASE COUNT          332 a          457 c          437 g          305 t
ORIGIN      
        1 tggctttaac ttcgaccgat acgatcgcga attgcgtcgc cccttcccgt cggaaccgca
       61 gttcgcgccg gactccaaga tctggcatcg tgagcacgct gtcgccgacg aggccaggcc
      121 cgcgacgccg gggcgcgaca aggtccctgt cgccacgacc agctacggcc aaaggctgga
      181 attccaataa aaggagatac acgcggagcg caggtacggg gttcacggcc cgtttcgagc
      241 catctgtaaa aagaggagag agtcgcctta tggtaccggt ccagccagcg atgttttctc
      301 cggatggatg gcttgtccgt cgaaaatctc tagcttttca tcgatatagg cgcgatgttt
      361 gcggaggaag tccgggtagg cgcccggtaa tgacagcggc acgatcgccg tcatagacgg
      421 ccttcctgaa tcaaccgctt ccgaatctcc aaaatgcgct cttgaccggc gtgcaaggcc
      481 tcgggggagg tgtggaccga atagtctccc agaacaagat tgtgattgtg aggcgctgcg
      541 gagccgacga caaattccgc gtcgctgctc gcctcgaatt caatcgattc gtttgacgaa
      601 tcaaaggccg ccaggtctcc tgcccgaagg acctcggagg cgaagaccgt tcccaaagca
      661 atagccgtcc agagaaccgt atgccccgcc ggcggttcgt aaatccagcg atcccccgct
      721 cgcaaacgca cagaaagata gttgatcggc gaaggcggcg taatgacgct tgatgccgac
      781 ccatagcgac cgaggagaac ccgcgccggt ccttcaaccg gaatctccgc aggcgattga
      841 tagatgctta ttgtcggccc cagttcaaga tgcggcggca aagctatcca gagctggaat
      901 cctcgcatgc ggccgggagc gtcgatactg ccgccgtgcc acattccgcg tccagcctgc
      961 atccactcca ccccgcccgc cggcagaatg cccgttacat tgtccggatc gatatagttg
     1021 accgagcctt ctgtgagatg tgacacggtc gcgatgccag agtgcggatg gaggccgctt
     1081 gttattggct cgcgcacatc atgatccaga taatcaagga atacgaaggg tttcagtatt
     1141 tcgccgaagt cgtcggatgg gctgatcagc cgcgcgaccg ggccgtgctt tcgcccacga
     1201 gtgcggcgag caatctgacg caccgccggc tctacagtat gaatagccat attggaacct
     1261 cccttacatt tcgatctaat caaccaactc ccggttgagt cctcgacgag cacttgcggt
     1321 caggaggcca cgcgaatgct cgtccgagac accaacgctt ctgaagcccc aatgaacttc
     1381 ttcgtgtagt cttccgtcag ttttggcgac gggaagattg cgaagccctt tggatcgaac
     1441 atcgctccgc tgtggccttc gaggtctgga caaaccagga ggggcaccag tcgttcagcg
     1501 taggtttcgg cactttttgc aaccagaccc a
//
LOCUS       DATILV010000742         2968 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3757377, whole genome shotgun sequence.
ACCESSION   DATILV010000742 DATILV010000000
VERSION     DATILV010000742.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2968)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2968)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2968
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3757377"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..603
                     /locus_tag="VLJ17_17555"
     CDS             <1..603
                     /locus_tag="VLJ17_17555"
                     /inference="COORDINATES: protein motif:HMM:NF014715.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004340 - glucokinase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005536 - glucose binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0051156 - glucose 6-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HSV24825.1"
                     /translation="LAVGKPLPGESMAVIGPGTGLGMAGLVRHGGSTTVIATEGGHAT
                     LPGLTPREDAVITHLRRWFGHVSAERALSGPGLENLHSAIAAIDDVAVPRRTAAEITR
                     HALERSCPVCVAAVDMFCAMLGTVAGNLALMFRARGGVYISGGIAPRLVNHMMQSEFH
                     ARFVAKGRFREYLESIPIAVIVNPDAAFLGLKALAEAAFV"
     gene            complement(726..2852)
                     /locus_tag="VLJ17_17560"
     CDS             complement(726..2852)
                     /locus_tag="VLJ17_17560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24826.1"
                     /translation="MNCLGFSRWLLSILLGGSVLAVLSGHAKAAAPLQASCHLQSAGN
                     KIKRVVSITFDNVHLRRDNPNVPSDLEQMPNLLNFLLDNGIVSGNHHTPLISHTATDI
                     LTTLTGVYGDRMGVPVANSYGFFRPDGSVGFSSSFLYWTSPSGGSLSAGDGEPQMVNE
                     NGKTAPAPWVPFTRAGCDVGAFSVANIEFESIPADVNTVFGATSPEGLEANNPALRDK
                     ANADFLGIAVHCAQGSALCANPHGRPDLLPDEPGGYTGFNALYGNFHVQPVISPSGPI
                     RDLDGNIIQTAAGNPGFPNIFNPLATQSLGYAAAMLEAGVPVVYVYISDAHDQHSTGP
                     ARAFGPGEAEYVAQLKAYDAAFGKFFDRLKADGITKNNTLFVVVPDENDHFVGGPPSP
                     TNCDGINTPCTYAKIGEIDAILNRLLITQRQNSTTFSVHSDDAPTVYIKGNPAPTDLV
                     TRTVAHDLNALTAVNPITGQTDKLSVFLADQAEMRLLHMVTSSPARTPTLTMFGNEDY
                     FFFNGSTADCSVAPACIVEDPGFAWNHGDVQQDITRTWFAMAGPGVRTLGRNDEVFSD
                     HTDIRPTIMALLGLNDDYIHDGRVLVEDLDEQALPHQLRDGREDFAELAKVYKQLNAP
                     LGSLGRNSLKFANRAITSDDTTYRKYLKQIGDITVARDQLAAQINTVLNAAAFEKSVG
                     ERENEDLVERAKRLIDQVEDLARRGK"
BASE COUNT          584 a          832 c          935 g          617 t
ORIGIN      
        1 ctcgccgtag gcaagccgtt gccgggagag tcgatggccg tgatcggacc cggcaccgga
       61 ttgggtatgg cgggactggt gcgccacgga ggcagcacga cagtcatcgc taccgagggc
      121 gggcatgcca cgttgccggg cctgacgccg cgtgaggacg ccgtcataac gcatctacgc
      181 cgttggttcg gccacgtgtc ggctgagcgc gcgctttcgg ggccggggct cgaaaatctc
      241 cattcggcca tcgcggcgat cgatgatgtt gctgtcccga ggcggaccgc agcggagatc
      301 actcggcacg ccctcgaacg cagttgcccg gtctgcgtgg cggcagtcga catgttctgc
      361 gccatgctgg gcacggtcgc tggcaatctc gcgctgatgt ttcgcgcgcg tggcggtgtt
      421 tacatttcag gcggcattgc tccgcgcctc gtcaatcata tgatgcagtc ggagttccac
      481 gcccgcttcg tggcaaaagg acgcttccgt gaatatctcg agagcattcc gatcgccgtc
      541 atcgtcaacc cggatgcggc atttctggga ctcaaagcgc tcgctgaggc ggcgttcgtc
      601 tgagaacggg atttctctcg gccgtcgatc tggcccgaag ccaatgaatt gacgacccaa
      661 agaagcccgc cagcgatgct ggcgggccgg cgaaatttat tcacagcatt tggcgcgctc
      721 aaaagctatt ttccgcgcct cgccagatct tcgacttggt cgataagccg ctttgcccgc
      781 tcgacgagat cttcgttctc gcgttcgccc accgatttct caaacgccgc ggcattcagc
      841 accgtgttga tctgcgccgc gagctggtcg cgggcaaccg ttatatcgcc gatctgcttc
      901 agatacttgc gataggtcgt atcatcgctg gtgatcgcgc gattggcaaa tttgagactg
      961 ttgcggccaa gcgaaccaag gggagcattg agttgcttgt aaaccttggc aagttcggcg
     1021 aagtcctccc ttccgtcgcg caattgatgc ggcaacgcct gttcatcgag atcctcgacg
     1081 agtacgcggc cgtcatggat gtaatcgtcg ttgaggccaa gaagggccat gatggtcggg
     1141 cgaatatcgg tgtgatccga aaacacctca tcgtttctgc ccagcgtccg cacgccgggg
     1201 ccggccattg cgaaccaggt gcgggtaata tcctgctgga catcgccgtg gttccacgca
     1261 aagccggggt cctcaacgat gcatgcgggc gccacggagc agtcagccgt gctgccattg
     1321 aaaaagaaat aatcttcatt cccgaacatc gtcagagtcg gtgtacgtgc cgggctcgac
     1381 gtgaccatat ggagaagccg catttcagcc tggtcggcga ggaacaccga cagtttgtcg
     1441 gtctggccgg tgatcgggtt gaccgccgtg agcgcattga gatcatgcgc cacggtacgc
     1501 gtgaccaaat cggtcggcgc cgggttgcct ttgatataga cggtcggcgc gtcgtcgcta
     1561 tggacggaaa acgtcgtgct gttttgccgc tgcgtgatca gcaggcgatt aagtatcgcg
     1621 tcgatttcac cgatcttggc ataagtgcaa ggagtattga ttccgtcgca gttggtgggg
     1681 ctcggcgggc cgccgacgaa gtgatcgttc tcgtcgggaa ccaccacgaa cagcgtgttg
     1741 ttcttggtga tgccgtcggc cttgagccga tcgaagaatt tgccgaacgc cgcatcgtaa
     1801 gccttgagtt gtgcaacgta ttctgcctcg cctggaccga aggcacgagc cgggccagta
     1861 ctgtgctgat cgtgtgcgtc agagatgtag acatagacca ccggcacacc ggcttcgagc
     1921 atggccgccg catacccgag cgattgcgta gcaagcggat tgaagatgtt ggggaagcca
     1981 ggattgccgg ccgcggtctg aatgatattg ccgtcaaggt cccggatcgg gccactcgga
     2041 gagatcaccg gctgcacatg gaaattaccg tagagcgcgt taaaaccagt gtagccgccc
     2101 ggttcgtccg gaaggagatc cggtctacca tggggattgg cacacagcgc gctgccttgg
     2161 gcgcaatgaa ccgcgatacc cagaaaatcc gcatttgcct tgtcgcgcag tgccggattg
     2221 ttggcttcta gcccttccgg cgacgttgca ccaaaaaccg tgttgacgtc ggccgggatg
     2281 ctttcgaact cgatattggc gaccgagaag gcgccgacgt cgcagccggc tcgggtgaag
     2341 ggcacccacg gcgcaggcgc ggtcttgcca ttctcgttga ccatctgcgg ctcgccgtcc
     2401 ccggcagaga gtgatccgcc tgatggcgaa gtccaataca ggaacgaact gctaaacccc
     2461 accgatccgt ctggacggaa gaatccgtag ctgttggcaa ccggcacgcc catccggtcg
     2521 ccgtagacgc cggtcaaggt ggtgaggatg tcggtggcgg tatgggaaat gagcggcgtg
     2581 tgatggtttc cgctgacgat gccgttgtcg agcaggaagt tgagtagatt tggcatctgc
     2641 tcgagatccg acggcacatt cgggttgtcg cggcgcaggt gaacgttatc gaatgtgatg
     2701 gaaacgaccc gtttgatctt gttgcccgct gattgaagat ggcaggacgc ttgcaacggg
     2761 gcagccgcct tcgcgtgtcc ggataagacc gcgagaacgc tgccaccgag caagatcgac
     2821 agcaaccagc gggagaagcc caagcaattc attcgtattc tcctgtttta ccaaagttgt
     2881 tggagccaaa tgacgtagga aatgcctgcg tgagccattg gagacacgtg atgttgcgga
     2941 gggatgacat cgcaatgaaa actgtgcg
//
LOCUS       DATILV010000743         2904 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1971985, whole genome shotgun sequence.
ACCESSION   DATILV010000743 DATILV010000000
VERSION     DATILV010000743.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2904)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2904)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2904
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1971985"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            188..1861
                     /locus_tag="VLJ17_17565"
     CDS             188..1861
                     /locus_tag="VLJ17_17565"
                     /EC_number="1.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015665359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent dehydrogenase, methanol/ethanol
                     family"
                     /protein_id="HSV24827.1"
                     /translation="MRKLRMAAVIAAAVAMPVYGQTLDDLKNDGKNTDNVLTYGMGYH
                     QNRYSSLKQINKTNVKRLVPVWNLSLDNQWGEQAQPLVYDGVMYVTNARHTVAIDVAT
                     GRQIWRHTLDWPPETPRVVCCGVSNKGPAIFNGKVFRTTLDAHVIALDMKTGQEVWKQ
                     KVAEWKEGFSMTMAPQVANGVLITGISGAEFGIRGFLDGWDPETGKRLWRQYTIPAPG
                     EKGYETWPPGDAYLRGGGSTWITGSYDPDLDLIYWGTGNAGPWNPVTRPGDNLYTASL
                     LAMRPKTGEVVWYYQFTPNDMYDWDANWELILGDINIDGVKRKVVMQLNRNGFLYVLD
                     RTNGKLLSAKPFEKVNWATHVDMTTGRPVESDVSKRVRAGEQIELWPSQWGAKNWPHA
                     AFNPETGLLYANTMHVMRYYRFVPVGEYKPGLRYQGVENLPAPIPPGEPVAYVDAIDP
                     MTAQPKWRAPIYDIPNYSAIIATAGGLLFTGKETGEVIALDIDNGKTLWQFQTGSGVN
                     AQPITFTHEGKQYVTILSGLGGVNQNRMREQLKNVPPGGSVWTFALMPQ"
     gene            1885..2202
                     /locus_tag="VLJ17_17570"
     CDS             1885..2202
                     /locus_tag="VLJ17_17570"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSV24828.1"
                     /translation="MKKIMAFTFALACAAAAQSSAGQEFSPEQIKKGAGIFAQNCSPC
                     HGAHMADPNAAFNLRKFPRDQKSRFIDSVTKGKNTMPPWGDLFQPDEIDALWAYVIAG
                     EKP"
     gene            2219..>2904
                     /locus_tag="VLJ17_17575"
     CDS             2219..>2904
                     /locus_tag="VLJ17_17575"
                     /inference="COORDINATES: protein motif:HMM:NF016089.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TQO small subunit DoxD"
                     /protein_id="HSV24829.1"
                     /translation="MSMLGTQGWIALLRIVVGAWFLKAVWTKLTIASLWGIPLPAVSQ
                     RFVGFQPKRVAEFAAGNPVGWYKDFLENIVLPNAALFAKFQTYGEVAVGIGLILGFCV
                     GLTALVGLFLTVNYGLATQWMSFGQQGFHVMLVTSMIVLLGSRAGRAWGADGLILRRA
                     SPASRRWLWIIMILALCLILPALAESTAGELRVFVTNEKSNNVTVIEVSTQKVLATIP
                     VGERPRGIVV"
BASE COUNT          618 a          821 c          901 g          564 t
ORIGIN      
        1 accttcacgc ataagggccg gcaatacgtc accgtgcttt ccggcattgg cggcctttac
       61 tggaaccaac agcgcgaacg actgaaggac atcgtgccgc agggcggctc ggtgtggacg
      121 tttgcgctga tcaaggattg attggaggag aataaaaggg gatgacgtga tgaaagcgag
      181 agggacgatg cgaaaacttc ggatggccgc ggtgatcgct gccgcggtcg caatgccggt
      241 ttacgggcag acgctggacg atctcaagaa cgacggaaaa aataccgaca acgtgctcac
      301 ctacggcatg ggctatcatc agaaccgcta cagctcgctc aagcagatca ataagacgaa
      361 cgtcaagcgc ttggtgcccg tgtggaactt gagccttgac aatcagtggg gcgagcaggc
      421 ccagccgctc gtctacgacg gcgtcatgta cgtgaccaat gcccggcaca cggtggccat
      481 cgacgtggcc accggcaggc agatctggag gcacacgctc gactggccgc ccgagacgcc
      541 ccgagtggtg tgctgcggcg tctccaataa aggcccggcg atattcaacg gcaaggtttt
      601 ccgcaccacg ctcgacgctc acgtgatcgc cctcgacatg aagaccggcc aggaggtttg
      661 gaagcagaaa gttgcagaat ggaaagaagg cttctcgatg acgatggcgc cgcaggtcgc
      721 caacggcgta ttgatcaccg gcatctccgg cgccgagttc ggcattcgtg gttttctcga
      781 cggttgggat ccagaaaccg gcaagcgctt gtggcgccaa tacaccatcc ccgctccggg
      841 tgagaaaggt tatgagactt ggccgccagg agacgcttac ttgcgcggcg gcgggtcgac
      901 ctggattaca ggctcgtacg atcccgatct cgatctcatc tattggggca cgggcaacgc
      961 aggcccgtgg aatccggtca cgcggccggg cgacaatctc tacactgcgt cactgcttgc
     1021 aatgagaccc aagaccggcg aggtcgtctg gtattaccag ttcacgccga acgatatgta
     1081 cgactgggat gctaactggg aattgatctt gggcgacatc aacattgatg gcgtcaagcg
     1141 caaggtcgtg atgcagttga accgcaacgg ctttctctat gtgctcgacc gcaccaacgg
     1201 caaactgttg tcggcgaagc cgttcgagaa ggtaaactgg gcgacgcatg tcgacatgac
     1261 cacaggccgg ccggtcgagt cggatgtgtc gaagcgggtg cgtgccggag agcagatcga
     1321 actgtggccc agccaatggg gcgcgaagaa ctggccacac gccgcgttta atccggagac
     1381 cgggctcctc tacgccaaca ccatgcacgt catgcggtat tacagattcg tgcccgtggg
     1441 ggagtacaag cccggcctgc gctaccaggg cgtcgaaaat ctgcccgcgc cgatcccccc
     1501 gggcgagccg gtcgcctatg tggacgcgat tgatccgatg accgcgcaac caaagtggcg
     1561 cgcgcccata tacgacattc caaactattc ggcgatcatc gccaccgccg gcggcctgtt
     1621 atttaccggc aaagagaccg gcgaagtcat cgccctcgat atcgacaacg gcaagacgct
     1681 gtggcaattc cagaccggct caggcgtcaa cgcgcaaccg atcacgttca cgcatgaggg
     1741 aaagcagtat gtaacgatcc tgtccggcct cggcggggtg aaccagaacc ggatgcgcga
     1801 gcaactcaag aacgtgccgc cgggcggctc ggtgtggacg tttgcactga tgccgcagtg
     1861 acttcgcgct tcgatggttt gacggtgaag aaaatcatgg ctttcacatt tgcgctcgca
     1921 tgtgcagccg cggcgcagag ctcggcgggg caggaatttt caccggagca gatcaaaaag
     1981 ggcgccggga tttttgcgca aaactgctcg ccctgccacg gcgcccacat ggccgacccg
     2041 aatgcggcat tcaacctacg caaattcccg cgcgatcaga agagccgctt catagactcg
     2101 gtgacaaaag gcaaaaacac catgccgcct tggggtgatc tgttccagcc tgatgaaatc
     2161 gatgcgttgt gggcttatgt catcgcgggg gagaaaccat gacagcgcgg agggatcaat
     2221 gagcatgctc ggcacgcagg gttggatcgc gcttctacgg atcgtcgtgg gcgcgtggtt
     2281 tttgaaggcg gtctggacca agctcacgat cgcttcgctc tggggtattc cattgcctgc
     2341 cgtctcgcag cgctttgtcg gctttcagcc caagcgcgtg gcggagtttg cagctggcaa
     2401 cccggtcgga tggtacaagg attttcttga gaacatcgtt ctgccgaacg ccgcgctgtt
     2461 cgcaaagttt caaacctacg gggaggttgc ggtcggcatc ggattgattc tgggtttctg
     2521 tgtcgggctg accgcgctgg tcgggctatt tctcaccgtc aactacggtc tggctactca
     2581 atggatgagc ttcggccaac agggattcca cgtcatgctg gtgacatcga tgatcgttct
     2641 gcttggcagc cgagccggcc gcgcgtgggg cgccgatggg ctcattctcc gacgggcttc
     2701 gccggcgagt cgaaggtggc tttggatcat catgatcctc gccctctgtt taatcttgcc
     2761 tgcgcttgcc gagtcgacgg ccggcgagct tcgtgtgttt gtgaccaacg agaaatctaa
     2821 taacgtgacg gtaatagaag taagcactca aaaagtgctg gcgacaattc ccgtcgggga
     2881 acgcccgcgc ggcattgtcg tgag
//
LOCUS       DATILV010000744         4406 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3250298, whole genome shotgun sequence.
ACCESSION   DATILV010000744 DATILV010000000
VERSION     DATILV010000744.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4406)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4406)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4406
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3250298"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(268..564)
                     /locus_tag="VLJ17_17580"
     CDS             complement(268..564)
                     /locus_tag="VLJ17_17580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
                     /protein_id="HSV24830.1"
                     /translation="MKSPVVKRSIVIAGHKTSVSLEDAFWTGLKEIAAKRDLTLSDMV
                     AAIDQDRRHGNLSSAIRLFVLDYYRATQHGTHAESKPPVIASAAGRTEQILRAD"
     gene            complement(545..748)
                     /locus_tag="VLJ17_17585"
     CDS             complement(545..748)
                     /locus_tag="VLJ17_17585"
                     /inference="COORDINATES: protein motif:HMM:NF025143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4169 family protein"
                     /protein_id="HSV24831.1"
                     /translation="MAEIVNLRNARKRANRQCAEKRAAEARVSHGMSKADRALAESNK
                     GKVRRELDKHRIETGEADEIAGR"
     gene            complement(941..2332)
                     /gene="fumC"
                     /locus_tag="VLJ17_17590"
     CDS             complement(941..2332)
                     /gene="fumC"
                     /locus_tag="VLJ17_17590"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004333 - fumarate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HSV24832.1"
                     /translation="MADTRIETDSFGPIEVPADRYWGAQTERSRRNFRIGVELMPSPV
                     IRALALVKRVAAEVNCELGLLDERRADAIVSAAEEIISGKLDDHFPLVVWQTGSGTQS
                     NMNVNEVIANRGNELLGGALGAHQPLHPNDHVNKSQSSNDSFPTAIRIAAVRDIAAQL
                     IPALEHLHRAVAEKAEAFTSIVKIGRTHMQDAVPLTLGQEFSGYAAQLGLGIGRIRQA
                     SAHLFAIAQGGTAVGTGLNAPPGFAERFASRLAALTDLPFVSAPNKFEALAAHDAEVF
                     FHGALSAMATGLFKIANDMRLLGSGPRCGLGELALPENEPGSSIMPGKVNPTQSEAMT
                     MACCQVFGNHTAVTLAASQGHLELNVYKPVIAHALLQSIRLLGDASVSFADHCIAGIH
                     PNPARIAQLVEKSLMLVTALTPRIGYDRAAAIAKAAHANGTTLRQEAVRLGYVPAEEF
                     DDLVRPDAMVHPS"
     gene            complement(2347..2829)
                     /gene="nikR"
                     /locus_tag="VLJ17_17595"
     CDS             complement(2347..2829)
                     /gene="nikR"
                     /locus_tag="VLJ17_17595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0010045 - response to nickel cation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-responsive transcriptional regulator
                     NikR"
                     /protein_id="HSV24833.1"
                     /translation="MQRVTITIDDDLVAEIDAFMTGRGYANRSEAIRDLARSGLSQSS
                     LEVARDRNCVATLSYVYDHAARELPKRLTQDFHAHHGLAQATLHVHLDHDSCLEVTVL
                     KGKSHEVKAFADHVIAERGVRHGHIAYMPADVGAHAHHEHENHGDRGRLHASAGSKKR
                     "
     gene            complement(2876..3196)
                     /locus_tag="VLJ17_17600"
     CDS             complement(2876..3196)
                     /locus_tag="VLJ17_17600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24834.1"
                     /translation="MLRFAETLMVGSICSFGCSAADGHGGETGTIGAASAGAGDWAGH
                     CYDNPGKHQSIQHPRRSMRLLGGLKALPQAEMGDFSPSLRYRRPASCAFIDSMTVGTT
                     QGKV"
     gene            complement(3602..>4406)
                     /locus_tag="VLJ17_17605"
     CDS             complement(3602..>4406)
                     /locus_tag="VLJ17_17605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HSV24835.1"
                     /translation="DNTGAVLPNFPFSKTWTPVSYRAAYTWEPVSGLTFYSQYATAYD
                     PAVASIFSIQPTLPVVLTSSRIYETGVKQLFWDNRAEWTLAAYDIVRRNVFQAQGGQT
                     FRVAGEIASKGIEIAAAVRPIEGWKFWGNLALTHARYVNFDFDGGSFSGNTPPNVAPV
                     IANAGASYRYERWWWPLEIGASVRHVGNRYLWDDNAVVMDAYTVADAYLFVDIEKSLM
                     LPNVDKARLAFRVRNLTNKAYAAFSDPGYPDQVYIGAPRSYEVALSFKF"
BASE COUNT          899 a         1334 c         1299 g          874 t
ORIGIN      
        1 cattgccacc tgctcaggca ccgcaggctt cgtcaaccgg acgcgctccg gaccctcagg
       61 gcccaaccga tagcaaaccg gccgctccgc cgctccgccg tgcgccgccg ccccccacct
      121 cagcgcagcc gaaaccgctc aacctcatgg aatccacacc ggcaagcagc cgctgacccg
      181 cttcggaatc gcggtcatga caatcgcagg cgggcgcctt tcagtgcgcc tccagcgttg
      241 cacaaacgcc cgtcggatta cacggtctca gtcggcgcgt agaatttgct cggttcgacc
      301 agcggcggag gcaatgaccg ggggtttact ctccgcgtgc gtaccgtgct gggtggcgcg
      361 ataataatcg agcacgaaca agcgaatggc ggacgacaga ttgccgtgcc gacggtcctg
      421 atcgattgcc gcaaccatgt cggataaggt caaatcgcgt tttgcggcga tttccttcaa
      481 cccggtccag aacgcgtcct ccaaactcac gctcgttttg tgtccggcga tcacgataga
      541 gcgcttaacg accggcgatt tcatcagctt ctcctgtctc gatacggtgc ttgtctagct
      601 cgcggcgaac ctttcctttg ttcgactcgg cgagcgcacg gtcagctttt gacataccgt
      661 gggaaactct tgcctcggca gcccgtttct cggcacactg gcgattagcc cgcttccggg
      721 cattacggag attgacgatc tcagccatgc acggtcgctg ttcccaaaaa aagaggcaaa
      781 agcccctttc cggtaggtta ctcagttggc cagaacaccg atttaaccaa cctacacaaa
      841 ccacaacgcc cagttgctta gcaattggac atgagtcggc gactcattac aatccacaat
      901 ataaccatag tgtgaataat ttccggcacg ttcaaggcga ttaggaggga tgtaccatgg
      961 cgtccggccg gaccaggtcg tcaaattcct cggccgggac gtagccaaga cgcactgctt
     1021 cctggcgcag ggttgtgcca ttggcatggg ccgccttagc aatcgccgcc gccctgtcgt
     1081 agccgatcct aggggtaagc gccgtcacca gcattaggga tttttccacc aattgggcga
     1141 ttcgcgccgg gttggggtgt atcccggcga tacaatgatc cgcaaaggat acggacgcgt
     1201 cgcctaaaag cctgatggac tgcaagagcg cgtgggcaat aacgggctta tagacgttga
     1261 gttcgagatg cccctggctg gctgccaacg tgacggcagt atgattgccg aatacttggc
     1321 agcacgccat cgtcatggct tctgactggg ttggattgac cttgccgggc atgatcgagg
     1381 agccgggctc gttttcaggc aatgccagtt cgcccagccc gcagcgcgga ccggacccga
     1441 gcaggcgcat gtcgttggca atcttaaaca ggccggtggc catggcggaa agcgcaccgt
     1501 ggaagaagac ctctgcgtca tgggcggcaa gtgcctcgaa cttattgggc gcactgacga
     1561 aaggcaaatc agtcaatgcg gcaagccgcg acgcgaatcg ttcggcaaaa cccgggggcg
     1621 cgttgaggcc ggtacctacg gcggtgcctc cctgggcgat ggcgaacagg tgggcggacg
     1681 cctgccggat gcgtccgatg cccaagccga gctgcgccgc atagccggag aactcctgcc
     1741 cgagggtgag cggcaccgca tcctgcatgt gtgtgcggcc gatcttgaca atggatgtaa
     1801 acgcctcggc cttctcggcg acggcccgat ggagatgctc aagagccgga atcaactgcg
     1861 cggcgatatc gcggaccgcc gcgatacgga tcgcggtcgg gaagctatca ttggacgatt
     1921 ggctcttatt gacatgatcg ttcggatgca gaggctggtg ggcgccgagc gcgccgccca
     1981 gcagttcatt gccgcgattg gcgatcacct cgttcacatt catgttggac tgggtgccgg
     2041 agccggtctg ccagacgacc agcgggaaat ggtcgtcgag cttgccagag atgatttcct
     2101 cggccgccga aacaatcgca tctgcccggc gctcgtcgag aagcccgagt tcgcagttca
     2161 cctcggcggc aacgcgcttg accagggcga gcgcccggat aaccggcgac ggcatcagct
     2221 ccacgccgat gcggaaattt cgccgggagc gttcggtctg cgctccccaa tagcgatccg
     2281 ccggaacctc gatggggcca aaactgtcgg tctcgatccg cgtgtctgcc atgagaaact
     2341 ttccgattag cgtttcttgc tgccagccga agcatggaga cgaccgcgat caccgtgatt
     2401 ttcatgctcg tgatgcgcat gcgcaccgac gtctgccggc atataggcaa tgtggccgtg
     2461 gcgcacgccg cgctccgcaa taacgtgatc cgcgaacgcc ttcacttcgt ggctcttgcc
     2521 cttgagcacg gttacttcga gacagctgtc gtgatcgaga tgaacgtgga gagtcgcctg
     2581 cgcgaggccg tggtgcgcat ggaagtcctg ggtcaggcgc ttgggcagtt cgcgcgccgc
     2641 atggtcgtac acatagctca acgtcgccac gcaattgcgg tcacgggcca cttcgagact
     2701 cgattgcgac agcccagaac gggcgaggtc gcgaatcgcc tccgaacgat tggcatagcc
     2761 gcgcccggtc atgaaggcat cgatctcggc cacgagatcg tcatcgattg tgatcgtcac
     2821 ccgctgcatc gcttccacca tccgccactc tttgtatgat gattttcaat ttacatcata
     2881 ctttgccctg tgtcgttcct acagtcatcg aatcgataaa agcacaactg gcggggcgcc
     2941 gatatcgcaa cgacgggctg aaatcaccca tttcagcttg agggagcgct ttaagtccgc
     3001 ccaaaaggcg catggagcgt cgagggtgct gtatcgattg gtgtttaccc gggttgtcgt
     3061 agcaatggcc ggcccaatct ccggcacctg ccgaggccgc tccgatcgtg cctgtttcac
     3121 caccgtggcc gtcggccgcc gagcagccaa acgagcagat gctgccaacc atcagcgttt
     3181 cggcaaaacg cagcaagccg cggcccaaac tgatcgcgga cgcaccacga ggaacgcagg
     3241 caatcactgc ttcggcgaga tctcggcccg agccctctca ctgaccagca tcttcgatgg
     3301 tcgcttgggt tatcgattcg gcaacggctg gcgcattcag ttcgagcctt caatctgttc
     3361 aacaccggga ccaatcagat caactatgcg tacggatcgc ggctgactac cgacagcctg
     3421 tttcggcagt gcttcccggt tcaggtcgca ccggcagccg tctgccgggc cggcgtgatg
     3481 gattaggatt atattacatc ctgcatccgg ccgagccgtt cgcagtgcgg gtctcgctga
     3541 tcggggtgtt ctaagctaag cgcagccaat tcgcgcaggc aaacgagcag ctgcgtcact
     3601 gtcagaactt gaacgaaaga gcgacttcat aactgcgcgg cgcaccgatg tagacttggt
     3661 ccggataacc cggatcggag aatgcagcgt atgccttgtt ggtcaggttt cgaacccgga
     3721 atgccaaccg cgctttgtcg acatttggca gcatgagcga cttttcgata tccacaaaca
     3781 agtaggcgtc cgcgaccgta taggcgtcca tcacgacggc gttgtcgtcc caaaggtagc
     3841 gattgccgac atgacggact gaggcgccga tctcgagggg ccaccaccat ctttcgtagc
     3901 gatacgatgc accggcattg gcaatgactg gagcgacgtt agggggcgta ttgccggaaa
     3961 acgatccgcc atcgaaatcg aagttgacat aacgcgcgtg agtgagtgcc agattacccc
     4021 agaacttcca tccttcgatc gggcgcacgg ccgcggcgat ctcgatgccc ttcgaagcga
     4081 tctccccggc gaccctgaag gtctggccgc cttgagcctg gaagacattc cggcgtacga
     4141 tatcataggc cgcgagtgtc cattccgccc tgttgtccca gaataattgc ttaacgccag
     4201 tctcatagat gcgcgaactc gtcaaaacca ccggcagcgt cggttggatt gaaaagatgc
     4261 tggcgaccgc gggatcgtag gcggtggcgt actggctata gaaggtcagg ccgcttaccg
     4321 gttcccacgt ataggccgcg cggtacgata ccggcgtcca cgtcttgcta aacgggaagt
     4381 tgggcaagac cgctccggtg ttatcc
//
LOCUS       DATILV010000745         7470 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1714067, whole genome shotgun sequence.
ACCESSION   DATILV010000745 DATILV010000000
VERSION     DATILV010000745.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7470)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7470)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7470
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1714067"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..768
                     /gene="secF"
                     /locus_tag="VLJ17_17610"
     CDS             <1..768
                     /gene="secF"
                     /locus_tag="VLJ17_17610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HSV24836.1"
                     /translation="NLGDVQLQQFGGPADVLIRVAQQPGGEQAQQAAVQKVQGALGDS
                     VDYRRVEVVGPRVSGELLHWGIIGIFVAIGAILIYLWFRFEWQFALGAMIANVHDIVL
                     TLGFMSVTQVDFDLTSIAALLTILGYSLNDTVVIYDRIREMLRRYKKMPMTELLNVSI
                     NATLSRSVITHVTVLLALLALLLFGGQAIHSFTATMMFGAALVGTYTSVFIASPILIY
                     LGVGTGRQYVPDSPEEIAVESPPTAPGRAPVPARARR"
     gene            774..1154
                     /locus_tag="VLJ17_17615"
     CDS             774..1154
                     /locus_tag="VLJ17_17615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MTH938/NDUFAF3 family protein"
                     /protein_id="HSV24837.1"
                     /translation="MDTPHLPNPAPIEAYGNGGFRFGGMSHRGSLLCLPNGIWASDVK
                     SVDELDEAALAPVLNSATPEATIDHFLIGAGRNFPTIPSSLRDAFRARHIALEAMTTG
                     AAVRTYNILLGERRRIGALLVAVD"
     gene            1198..1827
                     /locus_tag="VLJ17_17620"
     CDS             1198..1827
                     /locus_tag="VLJ17_17620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016918727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA];
                     GO_process: GO:0006672 - ceramide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ceramidase domain-containing protein"
                     /protein_id="HSV24838.1"
                     /translation="MEWSAPIDLYCERSDASLWAEPANALTNAAFVVAAAAAFVAWRR
                     AGGRDWPALALIIVVAAVGLGSFTFHTVATHGARLADVIPIAIFIYGYLLLALRRFLH
                     LSGGVALAIVVGYAAGAQALAWLAPPRTLNGSIGYVPALVAMIAMARVTRGRTRGGLE
                     LAVMIFTVSLALRTIDLAACETFPIGTHFLWHLLNAVVLYVLLRTAIST"
     gene            2064..3077
                     /locus_tag="VLJ17_17625"
     CDS             2064..3077
                     /locus_tag="VLJ17_17625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24839.1"
                     /translation="MTAIGTLTGVSVITMFAGAALAQDAPSKSINTGGEKGAYHTLFC
                     PPLPVALSNAYFHGYKCTPSKGTLENIDRVLKNPTNISFVQFDIHANETIKRAEEFKK
                     LTVIRSDIACEGLWMVTKNPDLNNYGHILALSRRIPFILPAQASGSAASFAFLQANDP
                     EGLGRVPEANKRYVADATAVLNETASSASGAVGFFVQFADPENTNIKLMVEKELKVIP
                     VVSREILRIRLSGQSIYQLQTFNLKSGGVFVKTTEATTACTPVAIITGAPEAFGGDRD
                     KVDDQKDLIQKVREVPTDKLLPQESRIAAVIRYAKKLTEQAVDEMVALVENTRQIIEN
                     RGQ"
     gene            3317..4141
                     /locus_tag="VLJ17_17630"
     CDS             3317..4141
                     /locus_tag="VLJ17_17630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24840.1"
                     /translation="MVLATLKLMCRSYRLFSAALVVTTAVWILSSSTLWRSGVVADFF
                     LRYLGSWQERTCERNKEACLMAKQAQLDALHTELSRAVNALADQKGKIARDLGDRQRD
                     LATHTALLEEGRQLYGRSVEFKSIVRFAGRDYASDALKRRLEALYRQGPSLQALVKQA
                     KALDEAVDRKLNDLLVKKSNVRAARDILPSQIELVRANMNIGDIDAILRDVTKLSDTV
                     KATVRELEDISGWLTTTRELLKRKIEADRSGQQSDFGQWLNTAPTAPSVAARDEPR"
     gene            4230..5207
                     /locus_tag="VLJ17_17635"
     CDS             4230..5207
                     /locus_tag="VLJ17_17635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24841.1"
                     /translation="MTVCEHDRLVEMYLTGLWTRTRDMVTYRCVLRADRLLELIDHVT
                     EFDEKLIGCIDAEIGHVITQAIGRPLEAHMMTPRQRAIWDAAVAVCPDRDKLVQEIKK
                     DPAVRGLNPNVTCEQALSQLLKTHLDARRREAAGITEHEDRVWAKLRQISDDLIREYQ
                     AKHGRSPPRGYRCSPEHFRDIRVRILRDEPHDQRVGKIKSSTIEVYFGRFCDECRHLV
                     SLESASETSHPGEPWGNGVLVLPPSLTKALPLLKKCIDRLDARMRDVIHAAYFEKPKV
                     VILPPQRPGGRAECRGREALGEGECERLRKEALRQLRMCLDLRMSEETR"
     gene            5204..5770
                     /locus_tag="VLJ17_17640"
     CDS             5204..5770
                     /locus_tag="VLJ17_17640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24842.1"
                     /translation="MTPGPGMQRLLSNVLALQNEDGRGAELTDERVKQVLLGRDAFTA
                     AEERMLATSPLARLIYAEVLEDLRLEEEAFAQRCERAGVKTETGSLLAASGGQYPMVL
                     PSDDFSVTLCPHPVSAGWVISLTLHDQFRRIMHSDEGLALVDEKGVTWLRGQVNSYGE
                     IHSYDWPHDETPAKCVQREGFKLRIRPG"
     gene            5791..7413
                     /locus_tag="VLJ17_17645"
     CDS             5791..7413
                     /locus_tag="VLJ17_17645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24843.1"
                     /translation="MWRKGGKSRELRSVAFPVVNRNGSDRLVYVYSIASLTERGSPKT
                     SHHGFAEVLFRYQGVVPEKDPLSTFFDTIPSKIHIVGDSFQLAVVIADRMTRYGFSKS
                     ETIIATGCLPDHDGTVGVVDEAEFDRKLDLLFNEAPPNSLFIFPKGNSVEATHDKLRR
                     LKDERGVNCKPIENLDEVKFLWETAGAIVGTKVVTAGFVALAVVGYIVWRWGQDSPPV
                     ESWPVSAEVISRSVNTAGENGAYHAQLCPRLLAALSKVGIQGYKCTPSKGTPENIERV
                     LENPTNISFVQLDVYAKKASEQPEKFKKKLSVIRSDIACEGLWMVTKNPALNTYSEIL
                     ASAQDITFILPTKESGSAASFTFLQTNDLKRLGHVPEINKRYVDDATAVLNEVANDDS
                     AVGFFVQFAEPENANIKLMVQKKLKVIPVVSNEILDIRQNGLSVYQRQTFKLKSRNVF
                     AGAMEATTACALVAVITGAPEEAFGSDRDKINAQRRLIQKLHDVPAEELRPQESHVAA
                     IIGYAGALIEKVVEELAALVENMRRMIERFGK"
BASE COUNT         1632 a         2077 c         2245 g         1516 t
ORIGIN      
        1 aatctcggcg acgtgcagct gcagcagttc ggcggacccg ccgacgtgct catccgtgtg
       61 gcgcagcagc cgggcggcga gcaggcgcag caggcggcgg tgcagaaagt gcagggggcg
      121 ctcggcgaca gcgttgacta ccgccgcgtc gaggtggtgg ggccgcgcgt gtccggcgag
      181 cttctgcatt ggggcatcat cgggatattc gtcgccatcg gggcgattct gatctatctg
      241 tggttccggt tcgagtggca atttgccctc ggtgccatga tcgccaatgt gcacgacatt
      301 gtgttgaccc tcggattcat gtcagtcacg caggtcgatt tcgacctcac cagcatcgcg
      361 gcgctactca ctatcctcgg atattcgctc aacgacaccg ttgtcatcta cgaccgtatc
      421 cgggaaatgc tgcggcgcta caagaagatg ccgatgacgg aattgctgaa cgtatcaatc
      481 aacgcgacat tgtcgcgctc ggtcatcacc cacgtgaccg tgctcttggc attgctggcg
      541 ctgcttttgt tcggcggcca ggcgatccat tcgttcacgg ccacgatgat gttcggcgcc
      601 gcgctggtcg gcacctatac gtcagtgttc atcgcgtcgc ccatcctgat ctatctcggc
      661 gtcggcaccg gtcggcaata cgttcccgat tcgcctgagg aaatcgcggt ggagtcgcca
      721 ccgaccgcgc cgggccgcgc gccggtgccc gcgcgagcgc gccgctgatc gcagtggaca
      781 cacctcatct tcccaacccc gcgcccatcg aggcttacgg caatggcggc tttcgctttg
      841 gtgggatgtc ccaccgcggc tcgcttttat gcctcccaaa cggcatttgg gcgagcgatg
      901 tgaagtcggt ggacgagctt gatgaagcag cgttggcgcc ggtgctcaat tccgcaacgc
      961 cggaagcaac gatcgatcat ttcctgatcg gtgccggcag gaattttccc accatcccgt
     1021 cgtcactgcg cgacgcgttc cgagcgcggc acatcgcgct cgaagccatg actaccggcg
     1081 cggcggtgcg cacctacaac attctgctcg gagaacgcag gaggatcggg gcgctgctgg
     1141 tagcggtgga ttaagccagg ccggcaaagg tgacggcgga atcggattca accaacgatg
     1201 gaatggtcgg cgccgattga tctctactgc gagcgctccg acgcgtcgtt gtgggcggag
     1261 cccgccaatg cgctgaccaa tgcggcgttc gtggtcgcag cagcggcggc gttcgtggcg
     1321 tggcgccgtg ccggcggacg cgattggccg gcgttggcgc tgatcatcgt cgtagccgct
     1381 gtcggccttg gctcgttcac cttccatacg gtggcgacac acggcgcgag gctcgccgat
     1441 gtgatcccga tcgcgatttt tatctacggc tacctgctgc tggccctgcg gcgcttcctg
     1501 catctgtccg ggggcgttgc gctcgcgatc gtggtcggct atgcggcggg cgcgcaggcg
     1561 ctggcgtggc tcgccccgcc gcgtaccctc aatggctcga tcggttatgt gccggcgctg
     1621 gtggcgatga tcgcgatggc gcgtgtgacg cgcggtcgga cgcggggcgg cctcgagctg
     1681 gccgtgatga tcttcacggt gtcgctggcc ctgcgcacca tcgatctcgc ggcttgcgag
     1741 acatttccca tcggcacgca ttttctttgg cacctgctca atgccgttgt gctctacgtg
     1801 ctgctgcgca ccgcgatcag cacatgatct cgagttgcaa gctgtcggca gaaaatacgt
     1861 ctcgcggctc tcagaaaacc tccacagaga taaaggcgag gatcatcctt gtcgaactga
     1921 tggggaccgc aatgatcaca gcacgctgat ctttaacgtc gccccttgcg gcatcggtcg
     1981 atcgctcacg ccactccgac gaggtccatg gacgcttcgg agcaagatat ctctgtaccc
     2041 cgtacggtgt aagggaggtt tttatgaccg ccatagggac actgacaggt gtatccgtca
     2101 taacgatgtt tgctggtgct gcgttggcac aggatgcgcc ttccaagtcg atcaatactg
     2161 gtggcgaaaa aggtgcctat cacacgttgt tctgcccgcc actgcccgtt gcgctttcga
     2221 atgcctattt ccacggttac aagtgcacgc caagcaaagg cacgctcgaa aacatcgatc
     2281 gtgtgctcaa gaacccaacc aacatcagct ttgtacagtt cgacatccac gctaatgaga
     2341 caatcaaacg agcagaggaa ttcaaaaagc tcaccgtgat ccgcagtgac atcgcgtgcg
     2401 agggcctgtg gatggtgacc aagaacccgg acctcaacaa ctacggccac atcctggctt
     2461 tgtcgcggcg gattccgttt atcttgcctg ctcaggcgag cgggtcggcg gcaagctttg
     2521 ctttcctgca ggcaaacgat cccgaaggcc tcggccgcgt gcccgaggct aacaagcgtt
     2581 atgtggccga tgccaccgca gtactgaatg aaaccgcttc cagcgccagt ggagcagtgg
     2641 gatttttcgt gcagtttgcc gatccagaga acaccaacat caagctgatg gttgaaaaag
     2701 agctcaaggt cattcccgta gtcagcaggg aaatactgcg catcaggcta agtggccaaa
     2761 gtatctatca gctgcagacg ttcaatttga agtcaggcgg cgtcttcgtc aagacgacgg
     2821 aagcaactac ggcctgtacc ccggttgcga tcatcaccgg agcgccggag gcattcggcg
     2881 gtgatcgtga caaggtcgac gatcagaaag acttgatcca aaaggtccgc gaggtgccga
     2941 ccgacaagct gctgccgcag gagagccgca tcgctgcagt catcagatat gccaagaagc
     3001 tcacagaaca ggcggtcgac gaaatggtcg cgctggtgga aaatacgcgc cagatcatcg
     3061 aaaatcgcgg ccagtaaccg caatgtggtc caacttacgg tgagggcggc gcatccgccc
     3121 ccaccgctac cacatcggcg acctgatgcg ggggacgcgc ttgggcgctc tcgagcgatg
     3181 tcattttaag gcaatccttg gccttgtgac ttgcagccgt cgcctacaaa aatctgcacc
     3241 ttggcggtat tggcgaggca aaacctccgt agagacatgg atgcgagggc tgaactcgaa
     3301 accgcggaga gcaaacatgg tcttggcaac gctcaagctg atgtgtcgaa gctatcgttt
     3361 gttttccgcc gccctggttg tcacgaccgc agtatggatt ttgtcctctt ccaccttgtg
     3421 gcggtcgggc gttgttgcgg atttcttctt gcgctatctc ggcagctggc aggagcgcac
     3481 atgcgaacgg aacaaagagg cctgcctgat ggccaaacag gcacaattgg acgcgctgca
     3541 caccgagctt tcgcgcgccg tcaacgcgct tgccgatcag aagggaaaaa tagcccgcga
     3601 tctcggcgat cggcaacgcg acttggcgac tcacactgcc ctcctcgaag aaggaaggca
     3661 gctctacggc cgatccgtcg agtttaagag tatagtccga tttgcaggtc gcgactatgc
     3721 gtccgacgca ctcaagcggc ggcttgaagc gctttatcga caggggccat ctctgcaggc
     3781 cctcgttaag caggccaagg cgctagatga agccgtggac cgcaagctca atgacctcct
     3841 ggtgaagaag tccaatgtgc gtgctgcgag agatatcctc ccctcgcaga tcgagctggt
     3901 gcgagccaac atgaacatcg gcgatatcga tgcgatcctc cgcgatgtga cgaagctgtc
     3961 cgacacggtc aaggcgacag tcagggaact tgaggacatc agcggctggc tgacgacaac
     4021 gcgcgaactt ctcaagcgga agatcgaagc agaccgaagc ggtcagcagt cagatttcgg
     4081 ccaatggttg aacacggcgc caaccgcgcc gagcgtggcg gcgcgggatg aaccccgata
     4141 gtcgtgaaca cctgggtggt cgtatcgctt gtccgaagaa acggctgatg aaaccatcag
     4201 catcaccaag ttgccgtagc gagccgacga tgaccgtatg cgaacatgat cgactggtcg
     4261 agatgtatct gacgggtttg tggacaagga cccgggatat ggtgacttac agatgcgtgc
     4321 tccgtgccga ccgcctgctc gagcttatcg atcacgtcac tgaattcgac gaaaaactga
     4381 tcggttgtat cgatgccgag atcgggcacg tgataactca agcaatagga cgccctttgg
     4441 aagctcatat gatgactcct cggcagcgcg cgatttggga cgctgccgtg gctgtttgtc
     4501 ccgatcgcga caagcttgtt caagagataa aaaaggatcc agccgtgcga ggattaaacc
     4561 cgaatgtgac ctgtgaacag gcgcttagtc aacttttaaa aactcacctc gacgctcgcc
     4621 ggcgcgaggc tgccggaatt acggaacatg aagaccgcgt ttgggccaaa cttcgccaaa
     4681 tcagcgacga cctgatacga gaatatcagg cgaaacacgg acgatcgcca cctcgcggat
     4741 atcggtgttc cccggagcat ttcagggaca tccgtgtgcg catcctacgt gacgaaccgc
     4801 acgatcaacg ggtcggcaag ataaaatcaa gtacaatcga agtatatttc ggccgatttt
     4861 gcgatgaatg tcgccatttg gtttctctgg agagtgcgag cgagacgtcg caccctggtg
     4921 agccgtgggg caacggcgtg ttggttctgc cgcccagctt gaccaaagca ttgccgcttc
     4981 tgaagaagtg cattgatcgt ctggacgcgc gtatgcgcga cgtcattcat gcggcatatt
     5041 ttgaaaagcc gaaagtggtg atattgcccc cacaacggcc aggcggcaga gccgaatgtc
     5101 gcggccgaga agcattgggt gagggagaat gcgaacggct gcgaaaagag gccttgcgcc
     5161 aacttcgtat gtgccttgac ttgcggatgt cggaggaaac gagatgacgc ccggacctgg
     5221 aatgcaaagg ttgttgagca acgtgctcgc gcttcagaac gaagacgggc gcggtgccga
     5281 gttgaccgat gaacgggtga aacaggttct gttagggcgt gacgcgttca cggccgcgga
     5341 ggaacgtatg ctggcgacgt caccgctggc gcgattgatc tatgcggagg tcctagagga
     5401 tttgcgactc gaggaggaag cgtttgcgca acgctgcgag agggcaggag taaagaccga
     5461 gaccggttct ctcctggcgg cgagcggcgg ccagtatcct atggtgctgc cgagcgacga
     5521 tttctcggtc acgctatgtc ctcaccccgt gtctgccgga tgggtcatct ccttgacgct
     5581 tcacgaccag tttcgccgaa ttatgcattc agacgaaggg ctggccctgg tcgacgagaa
     5641 gggcgtcacg tggcttcgcg gccaagtcaa tagctatgga gaaattcact cctatgattg
     5701 gccccacgac gaaactccag cgaaatgtgt gcaaagggaa ggatttaagc tgcgcattcg
     5761 acccggctga ggtctctgga ggacaagcgc atgtggcgaa aggggggaaa atcaagagaa
     5821 cttcgtagcg ttgcatttcc ggtggtgaat cgcaacggct ccgatcggct ggtctatgtg
     5881 tatagcatcg cgagcttgac agaacgtggc agtcccaaaa ccagccatca tggcttcgcc
     5941 gaggtgctct ttcggtatca aggcgtggta cctgaaaaag atcccctctc gacgttcttt
     6001 gataccatac caagcaagat tcatattgta ggagatagct ttcaactggc ggtcgttatt
     6061 gccgatcgca tgaccagata cggattctca aagtccgaaa cgatcatcgc gacagggtgc
     6121 ttgccggatc acgatggcac tgtcggtgtg gtcgacgaag ccgagtttga cagaaagctg
     6181 gatctgcttt ttaacgaggc tccgcccaat tctctgttta tctttccgaa gggaaattcc
     6241 gtcgaagcga cccacgacaa gcttcgacgt ctcaaggatg agcgcggcgt caactgcaaa
     6301 ccaatcgaaa acctggatga ggtcaagttc ctttgggaaa ctgccggagc aatcgtcggc
     6361 accaaggtgg tgacggcagg gttcgtcgca ctcgccgtag tgggctacat cgtttggcga
     6421 tggggccaag attctccgcc cgttgagtcg tggccagtca gtgccgaagt tatcagcagg
     6481 tcagtcaata ccgctggcga aaatggtgcc taccatgctc agttgtgtcc acggctgctc
     6541 gctgcgctct cgaaggtcgg catccagggt tataagtgca cgccaagcaa gggcacgccc
     6601 gaaaatatcg aacgcgtgct cgagaatccg accaatatca gctttgttca actcgacgtg
     6661 tatgccaaaa aagcaagcga gcagccggaa aaattcaaaa agaagctctc tgtgatccgc
     6721 agtgacatcg cgtgtgaggg cttgtggatg gtgacgaaaa atccagccct caacacctac
     6781 agcgagattt tggcctcggc gcaggacatt acgtttatcc tgcctacgaa ggaaagcggt
     6841 tcggcggcga gcttcacgtt cctacagacg aacgacctca aacgcctcgg ccacgtgccg
     6901 gagatcaaca agcgttatgt ggacgatgct acggcagtgc tgaacgaagt agccaacgac
     6961 gacagcgcgg tggggttttt cgtgcagttt gccgaaccgg aaaacgctaa tatcaagctg
     7021 atggtgcaaa aaaagctcaa agtcattccg gtggtgagca atgaaatatt ggatatcagg
     7081 caaaacggtt tgagcgtcta tcagcggcag acgttcaagc tgaagtcgcg taacgtcttc
     7141 gccggggcga tggaagcgac cacggcctgt gcgctggtcg cagtgattac gggagcgccg
     7201 gaagaagcgt tcggcagcga ccgtgataag attaacgcgc aaaggcggtt gatccagaag
     7261 ctccacgatg taccggccga agagctgcgg ccgcaggaaa gccacgtcgc cgcgatcatc
     7321 ggctatgccg gcgcgctcat agaaaaagtg gtggaggaac tcgctgcgct ggtggaaaat
     7381 atgcgccgga tgatcgagcg tttcggtaaa taatcgaaat tcgcctctca cattccccca
     7441 taaagccatt ccatcccatc ataggcttgc
//
LOCUS       DATILV010000746        15979 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_687127, whole genome shotgun sequence.
ACCESSION   DATILV010000746 DATILV010000000
VERSION     DATILV010000746.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 15979)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15979)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15979
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_687127"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..236)
                     /locus_tag="VLJ17_17650"
     CDS             complement(<1..236)
                     /locus_tag="VLJ17_17650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015670118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSV24844.1"
                     /translation="MARVAVVTGGTRGIGAAISKALKAAGYTVAANYGGNDVAAAKFN
                     AETGINVYKWDVSSYEACVEGLKQIVADLGPVEVL"
     gene            complement(512..1756)
                     /locus_tag="VLJ17_17655"
     CDS             complement(512..1756)
                     /locus_tag="VLJ17_17655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007761608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV24845.1"
                     /translation="MELTSDRGRRVTVDELNTTRLLAHARQQAHQRKFDDMIIVDVDA
                     HHYENEHMKDILPFMENDVLRQLSMAQGMKGGRGTLIPQQIGYQDMGGRVTRYALRGS
                     EKVDPGRHRDIQLGHRWMDAMGVDYSCLFPTGMLNIGLHPQREMEADLCWAYNRWVTE
                     KVLPESGGRMYSMLCLPFSNPDESLRHVETFGHREGVGGFMITTVRSLPVHDNAYMKV
                     YRAIEERGLVLSFHSAFNWSENVFRGCNRFIAVHALGFSFYNILHCTNWVVNGMGERF
                     PKLPVIWIEAGIAWVPFLMQRLDHEYMMRPSECPLLRKKPSEYMRDMHYSSQPMEIQD
                     LKAMEQTFRMMDAENHLLYASDYPHWDFDLPSTIYDLPFLSEKAKHNILGGTAARLFK
                     LKPRNDKQKENLIRFGNYTAAA"
     gene            complement(1819..2235)
                     /locus_tag="VLJ17_17660"
     CDS             complement(1819..2235)
                     /locus_tag="VLJ17_17660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24846.1"
                     /translation="MSARKVVAAKVATKTTRKGAAPASPKRASVKEVAGKPAAPTSKV
                     ADDASVAAKKLAADIDRALAQGQTDLLTVDAIQALMAAACRSYSAQVEAGGRFPPLAD
                     RSCVTSTDVMVTASGLLKSANLAVFELGMWQSWTGR"
     gene            complement(2222..2668)
                     /locus_tag="VLJ17_17665"
     CDS             complement(2222..2668)
                     /locus_tag="VLJ17_17665"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske (2Fe-2S) protein"
                     /protein_id="HSV24847.1"
                     /translation="MIIPLITPQRWAGSSRPVKAAMEGILRMAEKFVAKISEFKDGDR
                     RIVFVGDQEIGVFREHGTFYAYSNYCLHQGGPACEGLTIAKVEERIMPDKTSKGLYFS
                     DTELHFVCPWHGYEYDIKTGECVSDRKLKLRKYEVIQKGDEVYVRA"
     gene            2939..3856
                     /locus_tag="VLJ17_17670"
     CDS             2939..3856
                     /locus_tag="VLJ17_17670"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HSV24848.1"
                     /translation="MARYRLVTYAGAEGPRAGMVIGELVCDATKLTGHAADQSVLGIL
                     QDWTAARKRLDAAAASSAAGQPLAATKLLAPILWPSAIYCAGANYADHAAEMARASGR
                     TPEPDPHTLGLKPWHFLKAGRSTLAAHDDTVQITGLSKTMDWEVELAAVIGRVARNVP
                     LGEALDYVAGYTIANDLSARDMGRRPNVPDTAPFKFDWVAHKNFDGSCPLGPWIVPSQ
                     DIPDPQELGLKLWVNDVLKQDSNTSQMIFTLAEQIEHLSSRITLQPGDVILTGTPAGV
                     GAARPEFLKPGDVVKLWIENIGTLTNKMA"
     gene            3962..4291
                     /locus_tag="VLJ17_17675"
     CDS             3962..4291
                     /locus_tag="VLJ17_17675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013948207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjQ family protein"
                     /protein_id="HSV24849.1"
                     /translation="MIVTTTNDVADHKIVKYLGVVRGITVRSRNVFGTIGAQFQSLFG
                     GNITLYTALAERARREAYDLMVSHAMAQGANGVIAMRYDANEMAAGITEVLAYGTAVV
                     LENTQTS"
     gene            4323..5249
                     /locus_tag="VLJ17_17680"
     CDS             4323..5249
                     /locus_tag="VLJ17_17680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019171462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV24850.1"
                     /translation="MQSVISVSHLSKTYASGFCALKDINLDIHSREIFALLGPNGAGK
                     TTLISIICGIVNPTAGTVSVDGHDIISSYRKARALIGLVPQELTTDAFETVWATVSFS
                     RGLFGKPPNPLYIEKVLRELSLWDRKDSKIMTLSGGMKRRLLIAKALSHEPQILFLDE
                     PTAGVDVELRKDMWQTVRSLRASGVTIILTTHYIEEAEQMADRIGVINKGEIMLVEHK
                     AELMRKLGKKQLTLQLHAKLDAVPPGLAAHHLTLSPDGSELIYTYDTQGEHNDITTLL
                     ADLGGAGVRFRDLRTTESSLEDIFVGLVRPAR"
     gene            5246..6007
                     /locus_tag="VLJ17_17685"
     CDS             5246..6007
                     /locus_tag="VLJ17_17685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV24851.1"
                     /translation="MNFRAVQAIYLFEMSRTGRTLLQSIVSPVISTSLYFVVFGAAIG
                     SRITEIDGVAYGAFIVPGLMMMMLLTQSVANASFGIYFPKFTGTIYELLSAPLSSFEI
                     LLGYVGAAATKSTILGLIILATAGLFVPLRLDHPVWMLAFLALTAVTFSLLGFIIGIW
                     ADGFEKLQVVPLLVITPLSFLGGSFYSIRVLPPGWQTIALVNPVVYLISGFRWSFYGI
                     ADVGVAVSLGMTTTFLLACLAVVWWIFRTGYRLKR"
     gene            6086..7264
                     /locus_tag="VLJ17_17690"
     CDS             6086..7264
                     /locus_tag="VLJ17_17690"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012320352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052689 - carboxylic ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lactonase family protein"
                     /protein_id="HSV24852.1"
                     /translation="MTNRKPRYGLPISGAAILVVTLLGAQTQSAAPQPSPGTSAVYAY
                     VGSFTSVQRKARGDGIHVYRANPATGAWTHIQHIGDLVNPSYLTLSHDQRFLYSVHAD
                     EDYATAFALDPATGQAKLLNRAATGGKNGVRQAVDPSGKFLVMANYASGSVAVMPIAP
                     DGSLKDQHQLVQLPGDPGPHRVEQMSSHPHDIVFDPAGNFVLVPDKGLDRVFVFRFDS
                     ATGRLTPTEQGSVKSRPGAGSRHLAFHPKLPIVWVLNELDSTIATYRFDSERGALKPL
                     QVMSTLPSDFTGYSTMAEIAVSPDGRFVYGSNRGHDSVTIFAADPEGLLRVVGWQPTQ
                     GRTPRFIGLDPAGHFLYAANEQDDTVVTFRVDGNSGKLTPTGQVINNASPVTIVFAGK
                     "
     gene            7387..8559
                     /locus_tag="VLJ17_17695"
     CDS             7387..8559
                     /locus_tag="VLJ17_17695"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV24853.1"
                     /translation="MSKTKSAAGFVIALAVISPAHGEESLAIAKQGYFFVGSKYSTVG
                     DKQVMNGQIYVEYQIPKKRTQPYPLVIVPGAAQTATNFNGTPDGREGWTQHFLRRGYA
                     VYIVEQPGRGRSSYQPDTDGTQAYPEVLRVQQRFTAPEKFNLWPQARLHTQWPGTGMA
                     GESNFDQFFASQVPFVQNPEVIQALNRDAIAALIDKLGPVILMTHSQSGAYGWEAIDQ
                     RPNMIKALIQAEPSAPPVYDVEFLGAPEWFRDGVRTRTWGLTAIPITYAPPAKDASEL
                     AFERQEKADGPDLAKCWLQKEPARQLPNLQKLPIAIVTGEASFHAPYEHCVVKFLEQA
                     GVRPTWLNLGAIGIHGNGHMMMLEKNSDQIADVIDKWIRKALSERTAGTPQRRASR"
     gene            complement(8568..9545)
                     /locus_tag="VLJ17_17700"
     CDS             complement(8568..9545)
                     /locus_tag="VLJ17_17700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HSV24854.1"
                     /translation="MINAAICGLGRWGQTLVTAVQGRSNRIRFIRGVVRDSAPARDFT
                     CEHGLVLTTALAEVAGDPEIDAVFLATPHSLHVEQVIAIARAGKPVWCEKPLALSRTE
                     AGRAVAACRDAGVPLGCGYNRRCFPSMRELKRIVDGGTLGDILHVEGHFSNEYSTRLV
                     PYGWRDDPTESPALGMTGCGLHVLDALVNLAGPIRRVHAKACVSKPPPDPRDVVAVMT
                     EFESGATGLMATVRASVPFWRVHVFGAKGDAEARDEGHLRIGYIGAPATEHNFAPVDS
                     LLVLAESFADAVEGRTPFLISPRQLIDVTAAFEAVIRSLDTGAPVDVPE"
     gene            9681..10886
                     /locus_tag="VLJ17_17705"
     CDS             9681..10886
                     /locus_tag="VLJ17_17705"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV24855.1"
                     /translation="MRFLSTTIIAAIAVAVAPSANAEMIRIGVMLPYSGVNADLGDVQ
                     DKAIDLFLKVHGNMVGPHKIEIIKRDEGPPSGASAKTVATELITRDKVQMIAGVVFSP
                     SAIAMAPVMTQAKIPLLIGNAGTAWITNLSPYIARLSFSMWHPAYPMGTYAAKSIGCK
                     TAAMGYTDFPPGKDSTDAFKAGFEAAGGKIIDSIPMGNPAQVPDFTPFVQRVKDEKPD
                     CFYTFIPSGAHASGIVKTYGEVGLRQAGVKLIGPMDVTPNSKLQGMGDAAIGTVTMSS
                     YSTELDNPVNKEFVKRWHEAYGPDNYPDFMSAAGWDMMQAIVDTVRKLDGKFDDGEKV
                     MAALKGWTSTGPRGKVSIDAETRDVVQDEHALEVVRLADGKLGHKVLGVIPQVKDECK
                     VLKVGRCGQ"
     gene            11079..11948
                     /locus_tag="VLJ17_17710"
     CDS             11079..11948
                     /locus_tag="VLJ17_17710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018701269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSV24856.1"
                     /translation="MSIFNSIISILFDGLAYAMFLFIVSVGLSVTMGLMGFVNLAHGA
                     FAMAGGYLVLTLTGSLGVPFFLALVVTFATVAVVSVIFERTLYARLYRASELDQVLLT
                     IGLAFMAVAAYTYVYGPSPRTIVLPSYLTGQIDGGIRSFPVYRVFVIAVGGALITVLW
                     YAFERTNIGAKIRAAVDNRRMAQSIGIDVDRLFTFTFAAGSGLAALGGGLSIQLFGLS
                     PSFALVYLVFFLLVVAVGGLGSLKGTLAAALILGVFDTAGKYVFAGLGGFIIYAVAVV
                     ILLAKPAGLDGRE"
     gene            11935..12990
                     /locus_tag="VLJ17_17715"
     CDS             11935..12990
                     /locus_tag="VLJ17_17715"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSV24857.1"
                     /translation="MVANRSPRAGATKISAAAADSCTQAQAIAFLGNRHRFRLIEALP
                     WALAVAAYVVFPDRMTFGSQVLVMVLFALSLDLILGYAGIITLGHAAFFGIGAYTVGL
                     MTARLGWNEPISGLFAAATVAAFAGLASGALLLRYRGLTLLVLTLATTIMLQELGNFY
                     KDFTGGYDGIPGLQFAPLFGRFDYDLYGHTIYLYTLGVVFVLFLAVRRIVYSPFGQAL
                     AGIRENVARMHAIGSPVHGRLLTAYAISAAIAGIAGALFTETNAVVTLGVFDFDTYSA
                     AVMVMLILGGAGRLYGAFVGAVLYMVLQDYLAKLSPAFWQFGVGLLLVVTVLFARDGL
                     LDLFERLGARMTRWMRR"
     gene            12987..13751
                     /locus_tag="VLJ17_17720"
     CDS             12987..13751
                     /locus_tag="VLJ17_17720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019997211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV24858.1"
                     /translation="MNALEIESLQKSFGALQVTRDVNLSLERGARHALIGPNGAGKTT
                     LVNLITGMLKPSAGRVLLNGEDITALSQAARTRRGIARTFQINQLFRGLTVLENLYLS
                     VGERTGACNRLWRPAGAERSVIAEAMEHLDSLQLADLALKKVRELPYGRQRLVEIAIA
                     LAQRPKVLLLDEPAAGVPSSESHLILDVVGRLDPDIAVLIIEHDMDVVFRFAKRISVL
                     VAGSVLLEGAPDDILTDARVRAVYLGEDAPREARRG"
     gene            13744..14466
                     /locus_tag="VLJ17_17725"
     CDS             13744..14466
                     /locus_tag="VLJ17_17725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018063430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV24859.1"
                     /translation="MAEATYALQLDGVFAGYGDTVVIEHVVLRLRVGEAVSIIGRNGV
                     GKSTLLTTVMGHTTLHGGRIVLFDRDVSRLAVHRRARAGIGYVPQEREIFPSLTLREN
                     LEVAARPGTWTLEAVFDLFPRLAERRNNRGNQLSGGEQQMLSIARALIGNPSVVLMDE
                     PSEGLAPVIVEELARAVKRLAKMDRLTLLLVEQNTRLALAISPRTIIMDRGRIVYDGA
                     SETLTANPEMLERMIGVSKRRA"
     gene            complement(14596..15558)
                     /locus_tag="VLJ17_17730"
     CDS             complement(14596..15558)
                     /locus_tag="VLJ17_17730"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV24860.1"
                     /translation="MIVDFQHHFTPRELIRDDPGDRLVLHYDENGAPSYTVHSLLYDL
                     DEHIRMMDTAGIDAAWLTSAAGMAADPERSKFCNQKAKEAERDYPGRFIGAAHAHPLG
                     GPQALKELNRCKHELGFQGVVITSEADGKFLDAPDYEPFWVECEKLGMFVFVHPALKL
                     NFSQAFDGYDTARSVGREFSLIMATIRLINSGVFDRHPDLTVHMAHLAGGIASMLGRV
                     RSYQDKTFWGTAGNARHGVTPKHAFDHYLQHNMVFDTAGFCGAIGSVKTALVEIPAAR
                     MVFATDYPQEIRAREQVRNFVRDLRALGADGEKILSGNVRLLLK"
     gene            complement(15766..>15979)
                     /locus_tag="VLJ17_17735"
     CDS             complement(15766..>15979)
                     /locus_tag="VLJ17_17735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HSV24861.1"
                     /translation="FGPVFRYIDTFERFVDLGLFEAVPKVAAWRAALAKRPSVIGAVV
                     PDYSERLEAFLRKQNGWIAGLMRKAA"
BASE COUNT         3023 a         4927 c         4836 g         3193 t
ORIGIN      
        1 agcacctcga cggggccgag atctgcgacg atctgtttga ggccctcgac gcaggcttcg
       61 tacgaagaca catcccactt gtagacgttg atgccggtct cggcgttgaa cttggccgcc
      121 gctacgtcgt tgccaccgta attggcggca accgtgtagc cggctgcctt cagcgccttt
      181 gagatcgcgg cgccgatacc acgtgtgcca cctgtcacca cagccacccg tgccatcagg
      241 tcctcctgca gccgttgaag cgctccgatt ttgatcccga caggaccgcg ctccaaattt
      301 cccgattttg aacatgacct gaagttatgc caccttccgg gtcatccccc gacgccggca
      361 agggccatga ttcgcggccg caatcaagcg gtcataatag acgataatgc gcggtgctgc
      421 cgctgcacaa gcggcccgtc tcggcggtgc aacaaaggcg acccgatgga ccacgcccgc
      481 cacgcgattc caaccgagac cgggcagcgg atcaggccgc tgcagtgtaa ttgccgaacc
      541 tgatcaaatt ttctttctgc ttgtcgttac gcggcttcag cttgaacagg cgcgccgcgg
      601 tgccgccgag gatgttgtgc ttggccttct cggagaggaa cggcaggtca taaatggttg
      661 acggcaggtc gaagtcccaa tgcggatagt cggatgcata gaggagatgg ttttcggcat
      721 ccatcatgcg gaatgtctgc tccatcgcct tgaggtcctg aatctccatt ggctgcgagg
      781 aatagtgcat atcgcgcatg tattcgcttg gcttcttcct gagcagaggg cactcggaag
      841 gccgcatcat gtattcgtga tcgaggcgtt gcatgaggaa tggcacccag gcgatcccgg
      901 cctcgatcca tatcacgggc agtttcggga aacgctcgcc catgccgtta accacccaat
      961 tggtgcagtg aagaatgttg tagaacgaga agccgagcgc atgcaccgcg atgaaccggt
     1021 tgcagccgcg gaatacattt tcgctccaat taaacgccga gtggaacgag agcaccagac
     1081 cgcgctcctc gatggcgcga tagaccttca tgtacgcgtt gtcgtgcact ggcagcgagc
     1141 gcaccgtggt aatcatgaag ccgccgacac cttcgcggtg gccgaacgtc tccacatgcc
     1201 gcagcgactc gtcgggattt gagaacggca ggcacagcat cgaatacatc cgcccgcctg
     1261 actccggtag aactttttcg gtgacccagc ggttgtaggc ccagcacaga tcggcctcca
     1321 tctctcgctg gggatgcagg ccgatattga gcatgccggt tggaaacagg caggaatagt
     1381 cgacgcccat ggcgtccatc cagcggtggc cgagttggat gtcgcgatgc cggcccgggt
     1441 cgaccttttc ggatccgcgc agcgcatagc gggtgacgcg gccgcccata tcctgatagc
     1501 cgatttgctg cgggatcaac gtaccgcggc cgcctttcat gccctgcgcc atcgagagct
     1561 gacgtaggac gtcgttctcc atgaagggca gaatgtcctt catgtgctcg ttttcgtagt
     1621 gatgggcgtc gacatcgacg atgatcatgt cgtcgaattt gcgctgatgg gcctgctggc
     1681 gggcatgggc caggagtctc gtcgtgttca actcgtccac cgtaacacgg cggccgcgat
     1741 cggacgtcag ttccatggcg tgtctcctaa agggttcctc aaccgctatc ctgggctata
     1801 ttagggtggc gcggcctgtc agcggcctgt ccagctctgc cacattccaa gctcgaagac
     1861 cgcgagattg gccgatttca gcaatccgct tgccgtcacc atcacgtcgg tcgacgtgac
     1921 gcagctgcgg tctgcgagtg gcggaaaacg gccacctgct tcgacttgtg ccgaatagct
     1981 tcggcaggcc gccgccatca gcgcttggat tgcgtccact gtcagcaagt cggtctgccc
     2041 ctgtgccaga gcgcggtcga tatcggcggc gagcttcttg gccgccaccg atgcatcgtc
     2101 cgccactttg gacgtggggg cggctggttt accggcgacc tctttgacgg aagcgcgttt
     2161 gggggacgcc ggcgcggcgc ctttgcgggt agtttttgtt gcaactttcg ccgccacgac
     2221 cttacgcgcg gacataaacc tcgtctcctt tctggatgac ttcgtacttg cgcagcttga
     2281 gcttgcgatc cgacacgcat tcgccggtct tgatatcgta ctcatatccg tgccaggggc
     2341 acacgaagtg caactcggta tcggagaaat acaggccttt cgaggtcttg tcgggcatga
     2401 tgcgctcttc gaccttggca atcgtcaatc cttcacaggc cggtcccccc tggtgcagac
     2461 agtaattgct gtaggcataa aatgtgccgt gttcccggaa tacgccgatt tcctggtcac
     2521 caacgaacac aatacgacgg tcgccgtctt tgaactcgga aatcttggca acaaattttt
     2581 cagccattcg caggattccc tccatggcgg ccttgaccgg ccggcttgat cccgcccacc
     2641 gttgcggggt gatgagcgga attatcattt attacactcc aatctgcaat tgccagtagc
     2701 caaccgctta gctcgccgca gctggccttc tcgtccacct tcggttgtct tgcatccgac
     2761 gttgacacaa ccgatggatg ggcgaccttg gcaagctttg ggcagcaaat caccgtaggg
     2821 cagaacagac gacgcgcccg aaccgcgcag gctcggccgg accaagttgt ccgacggtag
     2881 gcccacttgc caaccggggg ccaaatcggc ttgttggcgc ccggaacgga gaggaactat
     2941 ggcacgctat aggctcgtga cttatgcggg cgccgaagga ccgcgggccg ggatggtgat
     3001 cggcgagctg gtctgcgatg ccacaaagct gaccggccat gcggccgacc agagcgtgct
     3061 gggtatcctg caagactgga cggcggcaag aaaacggctc gacgcggcgg ccgcctcgtc
     3121 ggctgcgggc caaccgctcg cggcgaccaa gctgttggcg ccgatcctgt ggccctccgc
     3181 aatctattgt gctggggcga actacgccga tcatgccgcc gaaatggcgc gtgcgagcgg
     3241 ccgcacgccc gaaccggacc ctcacacact cggccttaag ccgtggcatt ttctcaaggc
     3301 tgggcgcagc acgctcgcgg cgcacgacga taccgtgcag atcaccggcc tctccaaaac
     3361 tatggattgg gaggtcgagc ttgctgcggt gatcggacgc gtcgccagga acgtgccgct
     3421 cggcgaggca ctcgattacg tggccggcta taccattgcg aacgacctgt cggcgcgcga
     3481 catgggacgc cgccccaacg tgccagatac cgcgccgttc aagttcgact gggttgcaca
     3541 caagaatttc gacggctcgt gcccgctcgg accgtggatc gtgccaagcc aagacattcc
     3601 ggatccgcag gagctcggcc tcaagctgtg ggtcaacgac gtcctcaaac aggattccaa
     3661 caccagccag atgatcttta cgctcgcgga gcagatcgaa catttgtcct cacgcatcac
     3721 gttgcagcct ggcgacgtga tcctgaccgg gacgccagcc ggcgtcggag ccgcgcgacc
     3781 ggaatttctc aagcccggtg acgtggtcaa gctttggatc gagaacatcg gtacgctgac
     3841 caacaagatg gcttgagcga tcagccattc cgggccgcca gcgtcattcc gggagcgcag
     3901 gtcaaacccg tccagaaccg acgaaactgc taccatggaa gagctaaacc gggaggtcac
     3961 aatgattgtt acgacgacaa acgacgtcgc ggatcataag attgtcaagt atttgggcgt
     4021 cgtacgcggc attacggtgc gttcgcgcaa cgtgttcggg accatcgggg cgcagttcca
     4081 gtcccttttc ggcggcaaca ttacgctgta caccgcactc gcggaacgcg cccgccggga
     4141 agcgtacgat ctgatggtaa gccatgcaat ggcgcaaggg gccaatgggg taatcgcaat
     4201 gcgctatgat gcgaacgaga tggctgctgg catcaccgag gtcttggcct atggcacagc
     4261 cgtcgttcta gagaacacgc agacctcttg aaccttgtcg gcaagccacc agtatctttg
     4321 ccatgcagtc cgtcatctcg gtatcgcatc tttcgaagac ctacgcgtcc ggcttctgtg
     4381 cgctcaagga catcaacctc gacattcaca gccgcgagat tttcgcgctg ctgggcccca
     4441 atggcgccgg caagaccacg ctcatcagca tcatttgcgg gatcgtgaat ccgaccgccg
     4501 gcaccgtttc ggtcgatggt cacgacatta tctcgagcta ccgcaaggct cgagcgctga
     4561 tcgggctggt gccgcaggag ttgacaacag acgccttcga gacagtctgg gcgaccgtgt
     4621 cgttcagccg cgggctgttc ggcaaaccgc ccaatcccct ctatatcgaa aaggtgctca
     4681 gggagctgtc gctgtgggac cgtaaggaca gcaagatcat gacgctgtcc ggtggcatga
     4741 aacgccggct gctgatcgca aaggcgttgt cacatgagcc acagattctc tttctcgacg
     4801 agccgaccgc gggtgtcgac gtcgaactgc gcaaggacat gtggcagacc gtgcgatcgt
     4861 tgcgcgcctc cggcgtcacc atcatcctga cgacccacta catcgaggag gccgagcaaa
     4921 tggccgaccg cattggcgtg atcaacaaag gcgagatcat gttggtcgag cacaaggccg
     4981 agctgatgcg caagctcggc aagaagcagc tgacgctaca gctgcacgcg aagctcgatg
     5041 ccgttccgcc tgggctcgcg gctcatcatc taaccctgtc tcccgacggc agcgaattga
     5101 tttacaccta tgacacccag ggcgagcaca atgacataac gaccttgctc gccgacctcg
     5161 gcggcgcggg agtacggttc cgcgacctgc gcacgaccga aagctcgctc gaagatatct
     5221 tcgtcgggct ggtgaggccc gcacgatgaa ttttcgggca gttcaggcga tctatctgtt
     5281 cgagatgtcg cgtacgggga ggaccctgct gcaaagcatc gtttccccgg tgatttcaac
     5341 gtcgctgtac ttcgtggtgt ttggggcggc catcggctca cgcatcacgg agatcgacgg
     5401 cgtcgcctat ggcgccttca tcgtgccagg cctgatgatg atgatgctgt tgacccagag
     5461 cgttgctaac gcgtcgttcg gcatctattt tccgaaattc accggcacca tctacgagct
     5521 tctgtcagcg ccgctgtcgt ccttcgaaat cctgctcggt tacgtgggcg ccgccgcgac
     5581 caaatcgacc attctgggat tgatcatcct tgcgacggcc ggcttgttcg taccgctgcg
     5641 gctcgaccat ccggtctgga tgctggcgtt tttggctctg accgcagtga cattcagcct
     5701 gctcggcttc atcatcggca tctgggccga cggtttcgaa aagctgcaag tggtgccgct
     5761 ccttgtcatc accccgctga gcttcctcgg cggcagcttc tactccatca gggtgctgcc
     5821 gcccgggtgg cagacgatcg cgctcgtcaa tccggtggtt tatttgatca gcggcttccg
     5881 ttggagcttc tacggcatcg cggatgtggg cgtggccgtg agcctgggca tgacgacgac
     5941 attccttctc gcatgcctcg cggtggtgtg gtggattttc aggacgggct atcggcttaa
     6001 gcgataattg gctgtggtcg attcctccac gccaaaacat cgcctcgatg atattttatc
     6061 cgataacaga gccgggagga tgccaatgac caatcgcaaa cctcgctacg gattgcccat
     6121 ctccggcgct gccattctgg tcgtcactct ccttggcgcg cagactcaat cggccgcccc
     6181 ccaaccttct cccggaacca gcgccgtgta tgcctatgta ggatcgttca cgtccgtgca
     6241 gcgcaaggcg cgaggcgacg gcattcatgt ctaccgcgcc aacccggcga ccggcgcctg
     6301 gacccacatc cagcacatcg gcgatctcgt caacccatcc tatctgacgt tgagccatga
     6361 ccagcgcttt ctctattcgg tgcacgccga cgaagactat gcgaccgctt tcgcgctcga
     6421 cccggccacc ggccaagcca agctcctcaa tcgcgcggcg accggaggca agaatggtgt
     6481 ccggcaagcc gtcgatccgt cgggcaaatt tctagtgatg gccaattatg ccagcggaag
     6541 cgtcgcagtg atgccgatcg caccggacgg atcgctcaag gaccagcacc agttggttca
     6601 gctgcctggc gaccccggtc cacacagggt cgagcagatg agttcgcatc cacacgacat
     6661 cgtgttcgat cctgcgggca attttgtgct ggttcccgat aaggggctcg accgggtgtt
     6721 tgtattccgc ttcgacagcg ccaccggccg gctcactccg accgagcagg gctccgtgaa
     6781 gtcgcggccg ggcgccggat cccgccacct cgcgttccat ccaaaacttc cgatcgtgtg
     6841 ggtacttaac gaactcgaca gcacgatcgc gacctaccgc ttcgacagcg aacgcggcgc
     6901 tctcaagccg ctccaggtca tgtcgacgtt gccgagcgac ttcaccggct acagcacaat
     6961 ggcagagatc gcggtttccc cggacggccg gttcgtctac gggtccaatc gcggccacga
     7021 cagcgtcacc atcttcgctg ctgatccgga gggactgctg cgcgtcgtcg gttggcagcc
     7081 gacccaaggc cgtacgccgc gcttcatcgg tctcgatccc gccgggcatt tcctttacgc
     7141 ggcaaacgaa caggacgaca ctgtggtcac gtttcgggtc gacgggaact ccggcaaact
     7201 gacgccgacc gggcaagtga tcaacaacgc gagccccgtc acgatcgtgt tcgccgggaa
     7261 gtgaccgaga caaacgggac gaacgcgtgc cggtgcctat cacccgcggg cacaaagctg
     7321 ctacctttgc gccgccaact gcaattgcag gccatccaag gctgcgcatc tcgggaggaa
     7381 atcgcaatgt cgaaaacaaa aagcgccgct ggatttgtca tagcgctcgc cgtcatttca
     7441 cccgcgcatg gcgaggaatc gctcgcgatc gccaagcagg gttatttctt tgtcggcagc
     7501 aaatattcga ccgtcggcga caagcaggtg atgaacgggc agatctacgt cgaataccag
     7561 attccgaaaa agcgcaccca gccctatccg ctggtgatcg tgccgggtgc ggcgcagacc
     7621 gcgaccaatt tcaacggcac acccgatgga cgcgaagggt ggacccagca tttcctgcgt
     7681 cgcggttacg cagtctatat tgtggagcag cccggacgcg gccgctcctc ctatcagccc
     7741 gataccgacg ggactcaggc ctatccggag gttctgcgtg tgcagcagcg tttcacggct
     7801 ccggagaaat tcaacttgtg gccccaggcg cgcctgcata cccaatggcc tggcacggga
     7861 atggcaggcg agtccaactt cgatcagttc ttcgcctcgc aggtgccgtt cgtgcagaac
     7921 ccggaggtta tccaggcgct caaccgcgac gccatcgcgg cgctgatcga caagctcggt
     7981 cctgtgatcc tgatgacgca ttcgcaatca ggcgcctatg gttgggaggc gatcgaccag
     8041 aggcccaaca tgatcaaagc cctgatccag gcggagccat cagcgccgcc ggtttatgac
     8101 gtcgaattcc tcggcgcgcc cgaatggttc cgcgacggcg tgcgcacccg tacctggggc
     8161 ctcacggcga ttccgatcac ctatgcgccg cccgccaagg atgcctctga gctggcgttc
     8221 gagcgtcagg agaaggcgga cggcccggac ctcgccaagt gctggctaca gaaggagccg
     8281 gcgcggcaac ttcccaatct gcagaaactg ccgattgcga tcgtcaccgg agaggcctcg
     8341 ttccacgcac cctacgagca ctgcgtggtg aagtttttgg agcaggcggg ggtgcgtccg
     8401 acttggctca atctcggtgc cataggcatt cacggcaacg ggcacatgat gatgctggag
     8461 aagaactccg accagattgc cgatgtgatc gacaaatgga tccgcaaggc actatcggag
     8521 aggaccgccg ggacgccgca acgccgggcg tcgcggtaat tcggcggtca ttccggcaca
     8581 tccactgggg cgcctgtatc cagcgacctg atcaccgcct cgaaagcggc ggtgacgtct
     8641 atcaactggc gcggtgagat caagaacggt gtgcggccct ccactgcatc ggcgaaggat
     8701 tccgcgagca caagtaaaga gtctacgggc gcgaaattgt gctctgtcgc cggcgcaccg
     8761 atgtagccga ttctcagatg cccctcgtcg cgtgcctcgg cgtcgccctt agcgccaaat
     8821 acatgaacgc gccagaatgg tacagaagcc cgaaccgtcg ccatcaggcc ggtggcgcca
     8881 ctttcaaatt ccgtcatcac cgcaacgacg tcgcggggat cgggcggcgg cttagaaaca
     8941 catgctttcg catgtacccg gcggatcggg ccagcgaggt tgaccagcgc atcgagcaca
     9001 tgaaggccgc agcctgtcat accgagcgcc ggcgattcgg ttgggtcgtc gcgccaaccg
     9061 taagggacca ggcgtgtcga atattcgttg gagaaatgtc cttcgacgtg caggatgtcg
     9121 ccgagtgttc caccgtccac aatgcgcttg agttcgcgca ttgatggaaa gcaacgccgg
     9181 ttgtagccgc aaccaagcgg cacgccggca tcgcggcagg ctgcgaccgc ccgccccgcc
     9241 tctgtgcggc tgagagccag cggcttttcg caccacactg gcttgccggc tctggcgatg
     9301 gcaatcacct gctccacatg gagggaatga ggggtggcga gaaaaaccgc gtcgatctcg
     9361 ggatcgccgg cgacctccgc aagtgctgtc gtcaagacga ggccatgttc acaggtaaag
     9421 tcgcgcgccg gtgcggaatc gcgcaccacg ccgcgaataa aacggatacg attcgatctt
     9481 ccctgtaccg ccgtgaccag cgtctggccc cagcgtccca aaccgcaaat agcggcgttg
     9541 atcataagag ttcctcgcca acggatgcga catcacgtgc gttcgaccac ccatcgaaat
     9601 cagcacaatg tatgatagtt tgcgggcaac taagcaatcg cgatgcgcca tcgcaaagag
     9661 cggcccgagg aggaacgagc atgagatttt tgtcgaccac tattatcgcg gcgatcgccg
     9721 ttgcggtcgc gccgtccgcg aacgccgaaa tgatccgcat tggtgttatg ctgccctatt
     9781 cgggcgtcaa cgccgatctc ggcgacgttc aggacaaggc gatcgacctt ttcctgaagg
     9841 tgcatggcaa tatggtcgga ccgcacaaga tcgaaatcat caagcgcgac gagggcccgc
     9901 cgtcgggagc cagcgccaag actgtggcga ccgagttgat tacccgtgac aaggtacaga
     9961 tgattgccgg ggtcgtgttt tcgccctctg ccatcgccat ggcgccggtc atgacacagg
    10021 ccaagatccc gctgctgatc ggcaatgctg gcactgcctg gatcaccaat ctgtcgccct
    10081 atatcgcccg gctctccttt agcatgtggc acccggccta tcctatgggc acctatgcgg
    10141 caaagtcgat cggctgcaag acggccgcca tgggctacac ggatttcccg ccgggcaagg
    10201 attccaccga tgctttcaag gccggcttcg aagcggccgg cggcaagatc attgattcga
    10261 tcccgatggg aaatcccgcg caagtgcccg acttcacgcc gttcgttcaa cgggtcaaag
    10321 atgagaagcc cgattgcttc tatactttca tcccgtctgg cgcgcatgct tcgggcatcg
    10381 tcaagactta tggcgaagtc ggtctgcggc aggccggcgt caaactgatc gggcccatgg
    10441 acgtgacccc gaactccaaa ctgcaaggca tgggtgacgc cgccatcgga accgtaacaa
    10501 tgtcgagcta ctcgaccgaa ctcgacaatc ccgtcaacaa ggaattcgtc aagaggtggc
    10561 atgaggccta tgggccagac aactaccctg acttcatgtc tgccgcaggc tgggacatga
    10621 tgcaggcgat cgtcgacact gttaggaagc tcgacggcaa gttcgacgac ggcgagaagg
    10681 tgatggcggc gctcaagggg tggaccagca ccggtccgcg cggcaaggtc tcgatcgatg
    10741 cggaaacgcg agatgtggtg caggacgaac atgcgctcga agtggtgcgc ttggctgacg
    10801 gcaagctcgg ccacaaggtg ctgggcgtca ttccgcaagt gaaggacgag tgcaaagtac
    10861 ttaaagtcgg ccgttgcggg cagtagaccc tatgggggca ttgtaaaggc gtggcagatt
    10921 agtagggtgg gccccaggca cgctcctgaa ggcttcccga aggatcgcgc cgtgctccac
    10981 caggactgcg gcctcggtgg gcacgcctgt ctttgcgccg gccgaaggcc ggacccggcg
    11041 gtcttgccca ccttacgcgc tacgcccggc gctcaatcat gtcgatcttc aacagcatca
    11101 tcagcatcct tttcgacggg ctcgcctacg cgatgttcct gttcatcgtg tcggttggcc
    11161 tgtcggtcac catggggctg atggggttcg tcaatttggc ccacggggcg ttcgccatgg
    11221 cgggcggcta tctggtgctg acattgactg gcagcctggg ggtgccgttt ttcctggcgc
    11281 ttgtcgtgac cttcgcgacc gtcgcggtcg tgagcgtgat cttcgagcgt accctatacg
    11341 cccgacttta ccgggcgagc gagcttgatc aggtgctgct gaccatcggg ctcgccttca
    11401 tggcggtcgc cgcctatacg tatgtttacg gaccatcgcc acgcaccatc gtgctgccga
    11461 gctatctgac cggccagatc gacggtggca ttcggagctt tccggtttat cgggtgtttg
    11521 tcatcgcagt cgggggggcg ctgatcacgg tgctatggta tgcgttcgag cgcaccaata
    11581 tcggcgcgaa aatccgcgcc gcggtcgaca atcggcgcat ggcgcagtcg atcggcatcg
    11641 acgtcgaccg gctcttcacc ttcacctttg cggcaggatc aggactcgcg gcgctagggg
    11701 gcggcctcag cattcaactg ttcgggctca gtccgagctt cgcgctcgtc tatctcgtgt
    11761 ttttcctgct ggtggtcgcg gtcggcggac tcggcagcct caagggaacg ctagcggccg
    11821 cgctcattct cggcgtattt gatacagcgg gaaaatacgt ttttgcgggc ctaggcggct
    11881 tcatcattta tgcggtcgcc gtggtgatcc tgctcgccaa accggcaggg ctcgatggtc
    11941 gcgaataggt cccctcgagc aggagccacc aaaatatcag cggccgctgc agattcgtgc
    12001 acgcaggcgc aggctatcgc ctttctcggc aatcgccatc gctttcgcct tatcgaagca
    12061 ttgccgtggg cgttggcagt cgcggcctac gtcgtgtttc cggatcgcat gaccttcggc
    12121 agccaggtgc tggtgatggt gctattcgcg ctctcacttg atcttatcct tggctacgcc
    12181 ggcattatca cactggggca cgccgcattc ttcggcatcg gggcctatac ggtggggctg
    12241 atgacggcgc ggctcggctg gaacgagccg atctccggcc tgtttgcagc cgcaaccgtg
    12301 gcggcattcg caggtctcgc gtcaggcgcg ctcctcctgc gttaccgcgg tttgactctc
    12361 ttggtgctca cgctcgcgac caccatcatg ctgcaggagt tgggcaattt ttataaggac
    12421 tttaccggcg gctacgatgg cataccgggt ctccagttcg cgccgctgtt cggtcgcttc
    12481 gactacgatc tctacggcca caccatctat ctttatacgc tcggtgtcgt gttcgttctg
    12541 ttcctggcag tgcggcggat cgtgtattcg ccattcgggc aggcgctcgc cggcatccgg
    12601 gaaaatgttg cgcgcatgca tgcgatcggc tcgccggtgc atgggcggct gctcaccgcc
    12661 tatgcgatct cggctgccat agcgggcatt gccggcgcgt tgttcaccga aaccaatgcg
    12721 gtcgtcacgc tcggggtgtt cgatttcgac acttattcgg cagccgtgat ggtgatgttg
    12781 attctcggcg gcgccggtag gctctacggc gctttcgtag gcgccgtcct ctacatggtg
    12841 ctgcaggact atctcgccaa gttaagcccg gcattctggc aattcggcgt tggcctgttg
    12901 ctggtcgtga cagtgctgtt cgcccgcgac ggcttactcg atctgtttga acgtcttggc
    12961 gcgcgcatga cgcgatggat gcggcgatga acgccctcga aatcgaatcg ctgcagaaaa
    13021 gcttcggcgc tcttcaggtg actcgcgacg tcaacctgag ccttgagcgc ggtgctcgtc
    13081 acgcgctgat cggccctaac ggggcgggca aaaccacgct cgtcaatctc atcaccggca
    13141 tgctcaagcc gtccgccggc cgggtgctgc tcaatggcga agacattacc gcgttgtccc
    13201 aggcggcgcg gacacggcgc gggattgccc gcaccttcca gattaaccag ctgtttcgcg
    13261 gcctcacggt gctggaaaat ctctatttgt ccgtcggcga acggaccggc gcctgcaacc
    13321 ggctgtggcg gccggcgggc gccgaacgct ccgtgatcgc ggaggccatg gagcacctgg
    13381 attcgctcca gcttgccgac cttgcgctca aaaaggtgcg ggaacttccc tacggacggc
    13441 agcgcctggt cgagatcgcg atcgcgctgg cgcaacggcc gaaagttctc cttctcgacg
    13501 agccggccgc cggcgttccg tcgtcggaaa gccatctgat cctcgatgtg gtcggccggc
    13561 tcgacccaga tatcgcggtt ctgatcatcg agcacgacat ggatgttgta ttccggttcg
    13621 ccaagcgaat ttcagtgctg gtcgccggct ccgtgctttt ggagggcgcg cctgacgaca
    13681 tcctgaccga cgcgcgtgtg cgcgccgtct atctcggcga ggatgcccct cgggaggcgc
    13741 gccgtggctg aggcgaccta cgcactccaa ctcgacggcg tattcgccgg ctacggcgat
    13801 acggttgtga tcgaacatgt ggtgctgcgg ctgcgggtcg gtgaggccgt ttcgatcatt
    13861 ggccgcaacg gcgtcggcaa gtcgacactg ctcacgaccg tgatggggca cacgacactt
    13921 cacggcggca gaattgtgtt gtttgatcgt gacgtttcgc gtctcgcggt gcaccgccgc
    13981 gcccgggccg ggattggcta tgtgccgcaa gagcgcgaaa tctttccgtc tctgacgctg
    14041 cgcgaaaatc tcgaagtcgc cgcacggccc ggcacctgga cgctcgaggc cgtgttcgac
    14101 ctcttcccgc ggcttgccga gcggcgcaac aatcgcggca accagctctc gggtggcgag
    14161 cagcagatgc tctcaatcgc ccgcgctctc attggcaatc cgagtgtggt gttgatggac
    14221 gagccgtccg agggactggc accagtgatc gtcgaagaac tagcgcgcgc cgtaaagcgg
    14281 cttgccaaaa tggaccggct cacactgttg ttggtcgagc agaacacgcg gctggcgctg
    14341 gcaatatcac ctcgcaccat catcatggac cgcggacgga tcgtttatga cggggcgagt
    14401 gagaccctca cggcaaatcc cgagatgctc gagcggatga tcggggtgtc gaagcggcga
    14461 gcgtgacccc gcagccggaa caaccccgga tagggggccg ctcttgggcc cctatccggg
    14521 agcggtggcg caatcggtct ggcttcgccc cgccttatgg gccccaaggc agggtctcat
    14581 gcgggctaca gcccgtcatt tcaacaacag cctcacattg ccggacagta tcttctcccc
    14641 atcggcaccg agcgcccgca ggtcgcgcac gaaattgcgc acctgctcgc gggcacggat
    14701 ttcctgcgga tagtcggtgg cgaacaccat gcgcgccgcc ggaatttcga cgagggccgt
    14761 cttgactgat ccgattgcgc cgcaaaagcc ggccgtgtcg aacaccatgt tgtgctgcag
    14821 atagtgatcg aaagcgtgct tcggcgtgac gccatggcgt gcgttaccgg ccgtgcccca
    14881 aaacgtcttg tcctggtagc tgcgcacgcg tccgagcatc gacgcgatgc cgccggcgag
    14941 atgcgccatg tgcacggtga ggtcgggatg gcggtcgaac acgccggaat tgatcagccg
    15001 gatcgtcgcc atgatgaggg agaattcgcg gccgaccgag cgggcggtat cgtagccgtc
    15061 gaaggcttga gaaaaattga gcttcagcgc cgggtgtacg aacacgaaca ttccgagttt
    15121 ctcacattcc acccagaacg gctcgtaatc gggcgcatcg agaaacttgc catcggcctc
    15181 cgacgtaatg acaacgccct gaaatcccag ctcatgcttg cagcggttga gctcttttaa
    15241 tgcctgcggt ccgccgagtg gatgcgcatg ggcggcgcca atgaagcggc ccggatagtc
    15301 gcgttctgcc tctttggcct tctggttgca gaatttcgag cgctcgggat ccgcagccat
    15361 gccggccgcg ctggtgagcc aggcggcgtc gatccctgcg gtgtccatca tgcggatgtg
    15421 ctcgtcgaga tcataaagga gcgaatgcac cgtgtagctc ggcgctccgt tttcgtcata
    15481 gtggagaacc agccggtcgc cgggatcgtc gcgaatgagt tcgcgcggcg tgaagtggtg
    15541 ctggaaatcg acaatcattt ccgaggtccc catttggtcg gggattttta tctgcttgcc
    15601 gacggaacgc ctagtataac ggctccaacg ttttctgacc gccatcattc cggcaggccg
    15661 cttgcggcgg gccgcaaatc catactctcc ggaccgtggt tatgggactc cctcgccgct
    15721 ccggcgccgg aatgatcgaa acaatgtcgg taggcgtaca ccggctcatg cggccttgcg
    15781 catcaggccc gcgatccacc cgttttgctt gcgcagaaat gcctcgagcc tctccgaata
    15841 gtccggcaca accgcgccga tgaccgatgg ccgtttcgcc agcgccgcgc gccacgccgc
    15901 caccttgggc acggcttcga ataatccgag gtccacaaag cgctcaaagg tgtcgatata
    15961 gcggaatacc ggtccaaac
//
LOCUS       DATILV010000747         6443 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2737970, whole genome shotgun sequence.
ACCESSION   DATILV010000747 DATILV010000000
VERSION     DATILV010000747.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6443)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6443)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6443
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2737970"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..270
                     /locus_tag="VLJ17_17740"
     CDS             <1..270
                     /locus_tag="VLJ17_17740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24862.1"
                     /translation="DSVEPGANSRSNSRALRQISCPARAGTASTDHNQCRSAYLPKIQ
                     ASEIKEPKMCPPGQGMPGRVYQIDAGWMGGAASTGYRGPFFKSVE"
     gene            490..1425
                     /locus_tag="VLJ17_17745"
     CDS             490..1425
                     /locus_tag="VLJ17_17745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015316608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-5-aminohexanoate cleavage protein"
                     /protein_id="HSV24863.1"
                     /translation="MAASNNVIITCAVTGAIHTPTMSPHLPITPQQIAEAAIGAAEAG
                     AAIVHLHARDPQTGKPDQRPEAFAPFLPIIKQRCNAVINLTSGGSPTMRVEERVKPAE
                     VFKPEVASLNMGSMNFALFPMLNRYKTFKFDWEQPYLEGTRDLIFRNTFRDIEFVLRT
                     CQNNDTRFEFECYDISHLYNLAHFLERGLVKPPLFVQSVFGILGGIGTHPEDVMHMRR
                     TADRLLGRENYRWSVLGAGRNQMPIAAMSAAMGGNVRVGLEDSLWIGPGKLAESNAQQ
                     VGIARQIIEGLGLEIASPDEAREILSLKGADKVAF"
     gene            1691..1933
                     /locus_tag="VLJ17_17750"
     CDS             1691..1933
                     /locus_tag="VLJ17_17750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24864.1"
                     /translation="MTLAVKLWLALLLAVGGVSVGTVVYNAAVSPDNWMYLGGAQWKD
                     TGPHAAPGPVIGAGLPVLLLIGGGYWVTRRFRRKPE"
     gene            1930..2892
                     /locus_tag="VLJ17_17755"
     CDS             1930..2892
                     /locus_tag="VLJ17_17755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24865.1"
                     /translation="MKSALLTVKQNSRPSAACISFYDTTVCDAKVDVITSPDQPSVGH
                     CRFVTAFRSSMSRSEYFAALCILGCINGIGSRAIQAIASYGFFNAAFATFEVSALVWI
                     ACAIAIGLILEDNGDRITTFDMAIGVAFLVLIALPIGEASWFGLTALGLYLISVAQAA
                     SSRRRGAKILVAITIPMLWSRLLFRLFSEFILQIDASLVGRVLRTATTGNVVRFADGS
                     GDLVILPACSSLAGMSLVVLCWVTLSQVVQHPWSIKDAAWCLLAGISVLALNVIRMSI
                     MGLSGAYYETLHSAGGNFATNTLTLCLIAGFCMLGAKRELFTRV"
     gene            2870..3328
                     /locus_tag="VLJ17_17760"
     CDS             2870..3328
                     /locus_tag="VLJ17_17760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24866.1"
                     /translation="MSSSPAFKWFIGLLLPLTFAWKLAAGPGDPNEISETITQFLRHH
                     EFDDVRTEEAMAGMWVVRGRRGECRLFVVEGSSRGWTRDVMRSLANASDQLFFLSYGS
                     VYEYDSTWLTITSDIYVRTLRKLGLLRSVPILGVAASPICAAKRLPWKEL"
     gene            complement(3335..3772)
                     /locus_tag="VLJ17_17765"
     CDS             complement(3335..3772)
                     /locus_tag="VLJ17_17765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24867.1"
                     /translation="MLKLNPSISGLSILMALALGLWEYYFFFFGGSQEGPLGWFTPNR
                     LGFNLAWLALIYISFQLLSIPFALRATKERFTGVLDGMASLVPLGITLIVIFGKPHLL
                     GTPQRWEAAFLLLFIAAVDLFGGYTFNLALSRRMMDVAGPTST"
     gene            4720..6195
                     /locus_tag="VLJ17_17770"
     CDS             4720..6195
                     /locus_tag="VLJ17_17770"
                     /inference="COORDINATES: protein motif:HMM:NF028178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HSV24868.1"
                     /translation="MRLAIATLFIALALGISAPVSHAVEFGTRDEAVAMVKRVQAKVK
                     KDGLEETVRVINSGSKEFNDRDLYAFLLDFAGTNHANAQTPAVRGKNLHDLKDQDGKF
                     IVQDMIAVAKDVGHGWLDYRWLNPVTKTIEDKSTYVERVGTNHFVGVGVYKNEQPNVN
                     IIGLISGSPNSDDTYLQMAYDLADVLNDGDNLRILPIAGIGGPRNIRDVRYVKGIDIG
                     LTQTSILNNFRRSNERMGQTENKIAYIARLFNEEVHLVARANITSIAQLRGLKVNFDA
                     RGSGTSYSMRDIFKALEIEVEEVSMSQVEAFEKVKSGEIAATALIAGKPVRPMSKLGS
                     SDGLHFVPLPYPTQLMSDYLPTSLTHDDYPDLVPAGQSIDTLAVGAVLISYNWPKSNT
                     DRYRRIEKFIEVFFPKIAEFQKPPRHAKWREVNLTATLPGWPRFEAAQAWLDNRRSVV
                     EQPTVRQTVASGGATRSDIDTQDPLFREFLRWKEQRQRQGR"
BASE COUNT         1412 a         1803 c         1845 g         1383 t
ORIGIN      
        1 gattcggtcg aacctggcgc taattcgcgc agcaattcca gagcgctgcg gcaaatttcc
       61 tgcccggcca gagcaggaac agcctcaaca gatcacaatc aatgcaggtc ggcatacctg
      121 ccaaaaattc aggcatctga aattaaggag ccaaaaatgt gcccgcccgg gcaggggatg
      181 cccgggcggg tctatcagat cgatgcaggg tggatggggg gcgcagcatc gaccggatat
      241 aggggacctt tctttaaatc tgtcgagtag ggggatggtg gtctcgacag acattggtgt
      301 cgcgggccga ctgaagggtt caatggtttt tagaaaatgt tgacccgctg cggcgcatgg
      361 cgcattttcc tgcgaaactc gaagcggtta gccgctcaaa aaaattgctg atgcgcctcg
      421 ccgggggtgg tgccagcgat tcgagcgatc cggatacaac cggaaatata cccaagagga
      481 aaattcacca tggcggcatc caacaacgtc atcatcactt gtgccgtcac cggcgcgatt
      541 cataccccca ccatgtcgcc tcacctgccg atcaccccgc agcagatcgc cgaagccgcc
      601 atcggggctg cggaggccgg cgccgcaatc gtccacttgc acgcccgcga tccgcaaact
      661 gggaagcccg accagcggcc ggaggcattc gcgccattcc tgccgatcat taagcagcgc
      721 tgcaatgccg tcatcaactt gacctcgggc ggctcgccca ccatgcgggt cgaagagcgc
      781 gtaaaacccg ccgaggtgtt caaacccgag gtcgcgagcc tcaatatggg ctcgatgaat
      841 ttcgcgctgt tcccgatgct caaccgctac aagacgttca agttcgactg ggagcagcct
      901 tatctggagg ggacccgcga cctcatcttt cgcaacacct tccgggacat cgaattcgtc
      961 ctgagaacct gccagaacaa cgacacccgg ttcgaattcg aatgctacga catcagccac
     1021 ctttacaatc tggcgcattt cctcgagcgc ggcctggtca aaccgccgct gttcgtgcaa
     1081 tccgtgttcg gcattttggg cggcatcggt acccatcccg aggatgtgat gcacatgcgc
     1141 cgcaccgccg accggctgct cggacgcgag aattatcgat ggtccgtact gggcgccgga
     1201 cgcaaccaga tgccgatcgc cgcgatgtcg gcggccatgg gcggcaatgt gcgggtgggc
     1261 ctggaggatt cgctatggat cggccccggc aagcttgccg aatcaaacgc ccagcaagtc
     1321 ggtattgcgc gccagatcat cgagggacta gggttggaaa tcgcaagtcc ggacgaagca
     1381 cgggaaattc tttcgctgaa aggcgccgac aaggtcgcgt tctgaaagcc cggtgaaagc
     1441 cacaaaaagg tggcaacgag gcgggaggta agccctgaat agaaatcatt aagtctgcaa
     1501 cgtggtgatt gcgtaaaacc agcaaagttg gcaggctcag ctgagggcgt taagcagaaa
     1561 agttaagcca gaactgcgct attcatataa aactacaatt cgatttgacg agcttctggt
     1621 tcttatctta gatttgccta cgagaggccg catttgcgat gcggatcacg ggctcacaga
     1681 ggaagggaag atgaccttgg cggtaaaatt gtggcttgcc ctgttgttag ccgttggcgg
     1741 ggtatcagta ggtaccgtgg tttataatgc ggcggtttcg cccgacaatt ggatgtatct
     1801 gggcggggcg caatggaagg ataccggtcc tcacgccgcc ccagggccgg tcattggggc
     1861 gggtcttcca gtcttgctgc tgatcggcgg cgggtattgg gtcacgcgac gttttcgtcg
     1921 caagcctgaa tgaagagcgc gctcctgacg gtgaagcaga acagccgacc gtcagcagct
     1981 tgcatttctt tttacgacac gacggtttgc gacgcaaagg ttgacgtgat cacctcgccc
     2041 gatcagccca gcgtggggca ttgccgtttt gtaacagcat ttcgatcgtc aatgtcgcgc
     2101 agcgaatatt tcgcggcgtt gtgcatcctg ggatgcatca acggaatcgg atcaagagcg
     2161 attcaagcga tagccagtta tggttttttc aacgcggcgt ttgccacatt cgaggtcagc
     2221 gcgctggtat ggattgcttg cgcgattgca atcggtctta ttcttgagga caacggcgac
     2281 cgcatcacca ccttcgatat ggcgatcggg gtggcgtttt tggttctgat cgctcttccg
     2341 atcggtgaag cgagctggtt tggcctcaca gcgttgggcc tctacttgat atcggtcgcg
     2401 caagccgcgt catcacggcg gcgcggcgca aaaatcttgg tcgccattac gattccgatg
     2461 ctgtggagcc gcctcctatt tcgactcttc tccgagttca tcctgcagat tgatgcgtcc
     2521 ttggtcggtc gggtgctccg taccgcaacg accggcaacg tggtgcgctt cgcagacggc
     2581 agcggcgatc tcgtcatatt gccggcgtgc tcatcgctcg cgggcatgtc tttggtggtt
     2641 ctttgctggg tcaccttgag ccaagtcgtt cagcatccat ggtccattaa agatgctgcg
     2701 tggtgccttc tggcgggcat ctcagtccta gccctaaacg taatacgcat gagcattatg
     2761 ggcctgagcg gggcatatta cgagacgctt cacagtgcag ggggtaactt cgccaccaat
     2821 acgctgacgt tgtgcctcat tgccggattt tgcatgttgg gggccaaacg tgagctcttc
     2881 acccgcgttt aaatggttta ttggccttct gttgccgcta actttcgcgt ggaagctagc
     2941 cgccggacct ggcgacccga acgagatttc cgagacgatc acgcaattcc tccggcacca
     3001 cgagttcgac gacgtaagaa ccgaagaggc gatggctggc atgtgggtcg tgcgcgggcg
     3061 ccggggagaa tgccgcctgt tcgtcgtcga aggctcgagc aggggttgga cccgcgacgt
     3121 gatgagaagc ttggcaaatg cgtctgatca gttgttcttc ctatcttatg gatcggttta
     3181 tgaatacgat tctacttggc tgacgattac cagtgacatc tacgtcagga ccttgcgcaa
     3241 gctcggtttg ctgcgttctg tacccattct gggcgttgcg gcgtctccga tatgcgccgc
     3301 caaacgcctg ccatggaagg agctgtgaag gacctcaggt gctcgttggt cccgccacgt
     3361 ccatcatcct tcggctcagg gcaaggttga atgtgtatcc gccaaacaga tcaacggcag
     3421 caataaacag cagcaggaac gccgcctccc accgctgcgg tgtgccgaga agatgcggct
     3481 tgccgaatat cacaatgaga gtgatcccta atggcaccaa agatgccatc ccgtccaata
     3541 caccggtgaa ccgttccttg gtcgcacgca gtgcgaacgg gatcgagaga agctggaagg
     3601 aaatatagat gagcgccagc caagctaaat taaagcccaa tcgattcggc gtaaaccacc
     3661 cgagtggacc ttcctggctt cctccaaaaa agaagaagta atactcccat agcccaagcg
     3721 ctaaggccat gagaatgctc aatccactga tggatggatt tagttttaac attgtcacct
     3781 cgcgttatgg gctcgcccgt cgattgctat cgcgatggcg gatgcgacgg cgaatgaagt
     3841 cgagaggccg cggcgaaggt agcaataatt tggcgtctta aaaatcagta aatctcagcg
     3901 ttgtgcaatt tcgcgagtat agccccgacc tcgtcccagt ccccatcccc cgaggtcggg
     3961 gccactcggc ctcccaaagt gcttgattaa aacgccgcga ctcttttcga tttcgtcctc
     4021 gacatgagcc attcaaagta cgagtcgagc ttagtgccgt cctcggccga tgcgacctcg
     4081 ccgcaatcga ggcattggta cgtgctgaga tgtccgtcca cgcggatcag cttcgtggtt
     4141 ccacgacaga atgggcacat gcgactaccc ccaaaacaat actgcgtaca tactgccccg
     4201 ccgctcgtat tgtggctact ctcaatcgtg gctgttctgt ggacagaact gtggccgcca
     4261 acccgaaaga gcgcgaatat tgtggagtgt tgcaatccgg ccacttaacg aggggctctg
     4321 ggttccggat cgcgcgccac tcccggcgct agccggacca gcgttatttg tatcagtccg
     4381 aacagcgcgc ggccggcaca gtatttccgc ttcctctacc cttgatagaa atgtatagac
     4441 agcttaactc caggtcatcc catgtgccaa cgttgttgat gtgggacgtt attcacagca
     4501 aatactgtcg aatgcaattt caacacatgg tcaggtttac caagttccta ttcccgccgc
     4561 atttgcccct caatctactt aatcttcggg tcaaggggct gtccgcgtcg atttattctc
     4621 agcagcatgc gtgtttgatt caagacgcaa ccatcggcgt tgcgtggcgg atggtgattg
     4681 acagttccga cggccgccga cttttctggg aggaattcag tgcgtctcgc catagccact
     4741 ctcttcatcg ccttggcgct tgggatatct gcgcctgttt cgcatgccgt tgagttcggc
     4801 accagggacg aagcggtggc gatggtgaag cgcgtacagg caaaggtcaa aaaggatggt
     4861 ctggaggaga cggtccgggt gatcaacagc ggatcgaagg aattcaatga ccgggacctt
     4921 tatgcgttct tgcttgattt tgctggcacg aaccacgcaa acgcgcagac gccggctgtg
     4981 cgcggaaaga acctccacga tctcaaggat caggatggca aattcatagt ccaggacatg
     5041 atcgccgtcg caaaggatgt cggacacggc tggcttgact accggtggct caatcccgtc
     5101 acgaaaacca tcgaagacaa atcgacgtat gtcgagcgcg tgggcaccaa ccatttcgtg
     5161 ggcgtcggtg tgtacaagaa cgagcagccc aacgtgaata tcatcggcct gatctccggc
     5221 agcccgaatt cggacgatac gtatctgcag atggcctacg atcttgccga cgttctcaat
     5281 gacggcgaca atcttcggat tcttcccatc gccggaatcg gcggccctcg caacattcgc
     5341 gacgtgcgct acgtgaaggg catcgacatc ggcctcacgc aaaccagcat tctcaataac
     5401 ttccgccgat cgaacgagcg gatggggcaa actgaaaaca agatcgcgta catcgccagg
     5461 ctgttcaacg aagaggtgca cctggtggcg cgcgccaata tcacctcgat cgctcagctg
     5521 cgggggctca aagtcaactt cgatgcaaga ggcagcggaa ccagctactc gatgcgcgac
     5581 atcttcaagg cccttgagat cgaggtcgag gaagtcagca tgtcgcaggt cgaggccttt
     5641 gagaaggtca agtccggcga aattgccgcc acggccctga tcgccggcaa gccggtccgc
     5701 ccgatgtcca agctaggctc cagcgatggc ttgcatttcg tgccgctgcc atatcccacg
     5761 cagctgatgt cagactatct tcccacctcg ctcacccatg atgactaccc cgacctcgtt
     5821 ccggctggcc aatccatcga tacgcttgcg gttggggcgg tccttatctc atacaactgg
     5881 cccaagtcta atactgatcg ctatcggcgg attgaaaagt tcattgaggt gttctttccc
     5941 aagattgctg aattccagaa gccaccgcgc catgcaaaat ggcgagaggt caaccttacc
     6001 gccacattgc cgggttggcc cagatttgag gcggcgcagg cttggcttga caacaggcgc
     6061 agcgtcgtcg aacagccaac cgtccgccag acagtggcgt caggcggggc cacgcgatcg
     6121 gacatcgaca cgcaggatcc cctattccga gagttcttaa gatggaaaga acagcgccag
     6181 cggcagggcc ggtgacgttt ccgcccttgg cggcgtaaga ggttcggaaa atcagtcggc
     6241 gaatccggat agtcccgctg cagcaaatcg aagctgacca agaattttag cgcagcaagc
     6301 tccggggttt cacgccggag atatgcgccg aggcgcgttg gcccgatatg agtctgattg
     6361 cgggtttctc tgccgttcga tgtattggcg aatgatgctg atgggcgcac cgccacagga
     6421 tgcagcaaaa tagcttggcg acc
//
LOCUS       DATILV010000748         9564 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_176875, whole genome shotgun sequence.
ACCESSION   DATILV010000748 DATILV010000000
VERSION     DATILV010000748.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9564
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_176875"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..593
                     /locus_tag="VLJ17_17775"
     CDS             <1..593
                     /locus_tag="VLJ17_17775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008963462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="EF-Tu/IF-2/RF-3 family GTPase"
                     /protein_id="HSV24869.1"
                     /translation="YIPQPDRPKDLPFLMPVEDVFSISGRGTVVTGRIERGIIKVGEE
                     VEIVGLKPTLKTVVTGVEMFRKLLDQGEAGDNVGCLLRGTKREEVERGQVLCKPGSVK
                     PHTKFRAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVHLPEGTEMVMPGDNIA
                     MTIELIVPIAMEEKLRFAIREGGRTVGSGVVTSIIE"
     gene            660..968
                     /gene="rpsJ"
                     /locus_tag="VLJ17_17780"
     CDS             660..968
                     /gene="rpsJ"
                     /locus_tag="VLJ17_17780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005773267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HSV24870.1"
                     /translation="MNGQNIRIRLKAFDHRILDASTREIVATAKRTGALVRGPIPLPT
                     KIEKFTVNRSPHVDKKSREQFEMRTHKRLLDIVDPTPQTVDALMKLDLAAGVDVEIKL
                     "
     gene            1048..1782
                     /gene="rplC"
                     /locus_tag="VLJ17_17785"
     CDS             1048..1782
                     /gene="rplC"
                     /locus_tag="VLJ17_17785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HSV24871.1"
                     /translation="MRSGVIAQKIGMTRIFTEAGEHVPVTVLRLANCQVIGHRTKDKN
                     GYVALQLGAGSRKASRLTRAERNNFAVAKVEPKRKLVEFRVDEKALIPVGAEITADHF
                     VIGQFVDVTGTSIGKGFAGGMKRWNFGGLRASHGVSISHRSIGSTGGRQDPGRTFKNK
                     KMPGQMGVDRVTTLNLKVVQTDVARGLILVEGAVPGAKGGWITVRDAVKKVLPKDVPQ
                     PGKFRVAGGTPEGDQTGVESSPAQGA"
     gene            1785..2405
                     /gene="rplD"
                     /locus_tag="VLJ17_17790"
     CDS             1785..2405
                     /gene="rplD"
                     /locus_tag="VLJ17_17790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HSV24872.1"
                     /translation="MELKITTLDGEEKGSVSLSDAIFGLEPRHDLIQRCIVWQLAKRR
                     AGTHKVKGRAEIWRTGKKMYKQKGSGGARHGSQRANLFRGGGRSFGPVVRSHAIGLPK
                     KVRVLALKHALSAKAKDGGIMLIEEAKLAETKTKVLKGHFTKLGLANALIIAGAEVDN
                     GFRLATRNIPNIDVLPIQGINVYDILRRNTLVLTRAALDALEARLK"
     gene            2402..2701
                     /locus_tag="VLJ17_17795"
     CDS             2402..2701
                     /locus_tag="VLJ17_17795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HSV24873.1"
                     /translation="MTTNDPRHYDIIRSPVITEKATLASERNQVIFRVAPHATKPQIK
                     EAVEKLFDVKVKHVNTLIRKGKVRNFRGMRGQLSDVKKAVVTLEEGHRIDVTTGL"
     gene            2720..3556
                     /gene="rplB"
                     /locus_tag="VLJ17_17800"
     CDS             2720..3556
                     /gene="rplB"
                     /locus_tag="VLJ17_17800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HSV24874.1"
                     /translation="MALKNYKPTTPGQRQLVLVDRSALYKGKPVKALTTGKISSGGRN
                     NNGRITVRFRGGGHKRALRTVDFKRVKHDQPARVERIEYDPNRTGFIALIKYQDGELA
                     YILAPQRLGEGDTIVAGEHVDVKPGNAMPVGNMPVGTIVHNVELKIGKGGQLARSAGS
                     YAQIVGRDQEYVILRLNSGEQRLVHGRCKGTVGAVSNPDHMNISIGKAGRKRWLGRMP
                     HNRGVAMNPVDHPLGGGEGRSSGGRHPVTPWGFPTKGKKTRTNKRTTKFIISSRHARK
                     KK"
     gene            3569..3865
                     /gene="rpsS"
                     /locus_tag="VLJ17_17805"
     CDS             3569..3865
                     /gene="rpsS"
                     /locus_tag="VLJ17_17805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HSV24875.1"
                     /translation="MARSVWKGPFVDGYLLKKAEATRASGRHDVIKTWSRRSTILPQF
                     VGLTFGVHNGHKHIPVLVTEEMVGHKLGEFSPTRTFHGHSSDKKARRVSTPGAG"
     gene            3878..4258
                     /gene="rplV"
                     /locus_tag="VLJ17_17810"
     CDS             3878..4258
                     /gene="rplV"
                     /locus_tag="VLJ17_17810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HSV24876.1"
                     /translation="MSKTAHPRSLADNEAKAVARMLRISPQKLNLVAQLIRGKKVQAA
                     LADLEFSRKRIAKDVRKCLESAIANAENNHDLDVDDLVVARAHVGKGLVIKRFHARGR
                     GRAGKILKPFSHLTIVVRQVEASA"
     gene            4270..4965
                     /gene="rpsC"
                     /locus_tag="VLJ17_17815"
     CDS             4270..4965
                     /gene="rpsC"
                     /locus_tag="VLJ17_17815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HSV24877.1"
                     /translation="MGQKVSPTGLRLGINRTWDSRWYAGKGEYGKLLHEDMEIREELG
                     KQLKQAAVSKIVIERPHKKCRVTIHSARPGVVIGKKGADIEKLRKEVAKLTDSDVVLN
                     IIEIRKPELDAKLVAESIAQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGA
                     EIARLEWYREGRVPLHTLRADVDYGVATAFTTYGTCGVKVWIFKGEILEHDPMAQDKR
                     MAESDAGRPRRDS"
     gene            5007..5420
                     /gene="rplP"
                     /locus_tag="VLJ17_17820"
     CDS             5007..5420
                     /gene="rplP"
                     /locus_tag="VLJ17_17820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HSV24878.1"
                     /translation="MLQPMRTKFRKAHKGRIKGAATSGATLSFGQFGLKAMEPDRLTA
                     RQIEAARRAMTRHMKRAGRVWIRIYPDVPVSKKPLEVRMGSGKGAPELWVARIKPGRI
                     LFEIDGVSTTLAREALDLAAAKLPIKTRFVERIAE"
     gene            5433..5636
                     /gene="rpmC"
                     /locus_tag="VLJ17_17825"
     CDS             5433..5636
                     /gene="rpmC"
                     /locus_tag="VLJ17_17825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HSV24879.1"
                     /translation="MLKTEDLRAMTPDQLDDELIKLKKEQFNLRFQRATGQLANTSRV
                     REVRRDIARIKTAAQGKRAATVK"
     gene            5648..5893
                     /gene="rpsQ"
                     /locus_tag="VLJ17_17830"
     CDS             5648..5893
                     /gene="rpsQ"
                     /locus_tag="VLJ17_17830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HSV24880.1"
                     /translation="MPKRVLQGEVVSNKQAKTVVVRVERRFTHPVMKKTVRSSKKYYA
                     HDENNKCVVGDLVKIEEHAPISKLKRWIVVEGGQQAK"
     gene            5968..6336
                     /gene="rplN"
                     /locus_tag="VLJ17_17835"
     CDS             5968..6336
                     /gene="rplN"
                     /locus_tag="VLJ17_17835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011567679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HSV24881.1"
                     /translation="MIQMQTNLDVADNSGARRVMCIKVLGGSKRKYATIGDVIVVSVK
                     EAIPRGRVKKGDVMKAVVVRVRKDIRRADGSIIRFDRNAAVLINPQMEPVGTRIFGPV
                     PRELRAKNHMKIISLAPEVL"
     gene            6336..6653
                     /gene="rplX"
                     /locus_tag="VLJ17_17840"
     CDS             6336..6653
                     /gene="rplX"
                     /locus_tag="VLJ17_17840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HSV24882.1"
                     /translation="MAAKIRKGDKVVVLTGRDKGRTGEVIEVNPAASRALVRGINVVK
                     RHQRQSAQQEGGIISKELPIHLSNIAIADPKDGKPTRIGFKISGDRRKVRVAKRSGAE
                     IDG"
     gene            6865..7395
                     /gene="rplE"
                     /locus_tag="VLJ17_17845"
     CDS             6865..7395
                     /gene="rplE"
                     /locus_tag="VLJ17_17845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HSV24883.1"
                     /translation="MRIIFDTVVRKKLTEQFGYKNAMQVPALDKVVINMGIGEAVADR
                     KKVESAANDLALISGQKAVITKSRKAISTYKLRENQPIGCKVTLRKARMFEFIDRLVN
                     IALPRVRDFRGLNPKSFDGRGNYSLGLKEHIVFPEIDYDKAADIWGMDITVCTTARTD
                     EEARALLTAFNFPFRQ"
     gene            7437..7742
                     /gene="rpsN"
                     /locus_tag="VLJ17_17850"
     CDS             7437..7742
                     /gene="rpsN"
                     /locus_tag="VLJ17_17850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HSV24884.1"
                     /translation="MAKTSSIEKNHRRRRLTKKFAGKRSRLKAIANDKNKPLEERFDA
                     TVKLAALPRNGSATRIRNRCEVTGRARAYYRKLKMSRIAIRELGAKGLIPGLVKSSW"
     gene            7755..8153
                     /gene="rpsH"
                     /locus_tag="VLJ17_17855"
     CDS             7755..8153
                     /gene="rpsH"
                     /locus_tag="VLJ17_17855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HSV24885.1"
                     /translation="MNLNDPIGDMITRIRNAQSRTKSKVSTPGSKLRKSVLDVLKSEG
                     YIRDYSTLERSDGRTEFEIELKYFDGAPVIRVIERVSKPGRRVYVSVKNLPRINNGLG
                     VAIVSTPKGVMADHAARDANVGGEILCTVF"
     gene            8164..8697
                     /gene="rplF"
                     /locus_tag="VLJ17_17860"
     CDS             8164..8697
                     /gene="rplF"
                     /locus_tag="VLJ17_17860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004685699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HSV24886.1"
                     /translation="MSRIGKKSVPIPSGVTASVEGQTVKMKGPKGALQFVAPDDVAVK
                     LDEGAIKVDPRLDSKRALAMWGTSRTLIANLVTGVTKGFESKLDITGVGYRATVQGKN
                     LQIALGYSHDVIYPIPDGIAIATPRPTEIVVTGIDKQKVGQVAAEIRSFRPPEPYKGK
                     GVRYSGEYIFRKEGKKK"
     gene            8721..9077
                     /gene="rplR"
                     /locus_tag="VLJ17_17865"
     CDS             8721..9077
                     /gene="rplR"
                     /locus_tag="VLJ17_17865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HSV24887.1"
                     /translation="MTTKQVERRKARIRRTIKGAAGVRPRLSVFRSSKHIYAQVIDDR
                     KGATVAAASSLEKDMRGGLKTGADIGAAKAVGKLVAERAVAAGVKDVVFDRGHYLYHG
                     RVKALADAAREGGLNF"
     gene            9178..>9564
                     /locus_tag="VLJ17_17870"
     CDS             9178..>9564
                     /locus_tag="VLJ17_17870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HSV24888.1"
                     /translation="MAREREHRDRDREERDSEFTDKLVHINRVAKVVKGGRRFGFAAL
                     VVVGDQKGRVGFGHGKAREVPEAIRKATDAAKRSLVRVPLREGRTLHHDVEGRHGAGK
                     VFLRAASAGTGIIAGGPMRAVFETLGM"
BASE COUNT         2080 a         2823 c         3103 g         1558 t
ORIGIN      
        1 gctacattcc gcagcctgat cgcccgaagg acctgccatt cctgatgccg gtcgaggacg
       61 tgttctcgat ctcgggccgc ggtaccgtgg tgacggggcg gatcgagcgc ggcatcatca
      121 aggtcggcga ggaagtcgag atcgtcgggc tcaagccgac actcaagacc gtggtcaccg
      181 gcgtcgagat gttccgcaag ctgctcgatc aaggtgaggc cggcgataac gtcggttgcc
      241 tgttacgcgg taccaagcgc gaggaagtcg agcgcggtca ggtgctgtgc aagcccggca
      301 gcgtcaagcc gcacaccaag tttagggccg aggcctacat cctcaccaag gaggaaggtg
      361 gtcgccacac gcccttcttt accaactatc gtccgcagtt ctatttccgc accaccgacg
      421 tgaccggcgt ggtgcacttg ccggaaggca ccgaaatggt gatgccgggc gacaacatcg
      481 ccatgacgat cgaattgatc gtgcccatcg ccatggagga gaagctgcgc ttcgctatcc
      541 gcgagggtgg tcgcaccgtc ggttcgggcg tcgtcaccag catcattgaa tgaggattgt
      601 cgtcatggcc gggcacgccc ggccatgacg atttagtgcg acgctgaaga ggcaaagaaa
      661 tgaacggcca gaacattcga atcaggctca aggcgttcga tcaccgcatc ctcgatgcgt
      721 ccacgcgcga gatcgtcgcg accgccaagc gcaccggcgc gctggtgcgc ggaccgatcc
      781 cgctgccaac caagattgag aaattcactg tgaatcgctc gccgcacgtc gacaagaaga
      841 gccgcgagca gtttgagatg cggacccaca agcggctgct cgatatcgta gatccgacgc
      901 cccagacggt cgatgcgttg atgaagctcg atcttgccgc cggcgtcgac gtcgagatca
      961 agctctagtg caggctcgct cccgatcctc cctacaaggg gggtagggag ggggtaggca
     1021 ggaggcagca gcaaaggatt aaagccgatg cgttccggag tgatcgcaca aaaaataggg
     1081 atgacccgca tcttcaccga ggcgggcgag catgtaccgg tgacggtgct gcggctcgcc
     1141 aattgtcagg tgatcgggca ccgcaccaaa gacaagaacg gctatgtggc gctgcaactc
     1201 ggcgccggca gccgcaaggc gtcgcggctc acccgcgcgg agcgcaacaa cttcgcggtc
     1261 gccaaagttg agcccaagcg caagcttgtg gaattccgcg tcgacgagaa ggcgctgatc
     1321 ccggtcggcg ccgagatcac ggccgaccat tttgtgatcg gccagttcgt cgacgtcacc
     1381 ggtacgtcga tcggcaaggg ctttgcgggt ggcatgaagc gctggaactt cggcggcctg
     1441 cgagcctccc acggcgtgtc gatctcgcac cgctcgatcg ggtcgaccgg cggccgccag
     1501 gacccgggac gtacgttcaa gaacaagaag atgccgggcc agatgggcgt cgatcgcgtc
     1561 accaccctca atctcaaggt ggtccagacc gacgtcgcgc gcggtctcat tttggtcgag
     1621 ggcgcggtgc cgggtgccaa gggcggctgg attacggtgc gcgacgccgt caaaaaggtt
     1681 ttgccgaagg acgtaccgca acccggcaag ttccgcgtcg cgggcggcac gccagagggc
     1741 gaccaaacgg gcgtcgaatc gtcgccggcg cagggagcgt gaccatggaa ctcaagatca
     1801 cgaccctcga cggcgaggag aagggttcgg tcagcctgtc cgacgcgatc ttcgggctag
     1861 agccacgcca tgatctcatc caacgctgca tcgtctggca gctcgccaag cgccgcgccg
     1921 gcacccataa ggttaagggg cgcgccgaga tttggcgcac cggcaagaaa atgtataagc
     1981 agaagggcag tggcggtgcc cgccacggct cccagcgcgc caatctgttt cgcggcggtg
     2041 gccgctcttt cggtccggtg gtacgcagcc acgcgatcgg cctgcccaag aaggtgcgcg
     2101 tcctcgccct caagcatgcc ctctcggcca aagccaaaga cggcgggata atgctcatcg
     2161 aggaggccaa gctcgccgag acaaagacca aggtgctcaa gggccatttt accaagcttg
     2221 gacttgccaa tgcgctaata attgccggcg ccgaggtcga caatggtttt cgcttggcga
     2281 cccgcaacat tcccaatatc gatgtgctgc cgatccaagg catcaacgtc tacgacattc
     2341 tgcggcgaaa cacgctcgtc ctcaccaggg cggcgctcga tgcgctggag gcgcgcttga
     2401 aatgaccacc aacgatccgc gccactacga catcatcagg tcgccggtca taaccgaaaa
     2461 agcgacgctt gcctcggagc gcaaccaagt gatcttccgg gtcgcgcccc atgccaccaa
     2521 gccgcagatc aaggaagcag tggagaagct gttcgacgtc aaggtcaagc acgtcaatac
     2581 gctcattcgc aagggtaagg tccgcaattt ccgcggcatg cgcggccagt tatcggacgt
     2641 gaagaaggct gtcgtgaccc tcgaggaggg gcaccgcatc gacgtgacca cagggctgtg
     2701 agcgcgggaa gcaggaacca tggcactcaa gaactataag ccaacgacgc cgggccagcg
     2761 ccagctggtt ctggtcgacc gttccgcgct ttacaagggc aagcccgtga aggcgctgac
     2821 cactggcaag atctcgtcgg gagggcgtaa caacaacggc cgcattaccg tgcgcttccg
     2881 cggcggcggc cacaagcggg cgctgcgtac ggtcgacttc aagcgtgtca agcatgacca
     2941 gccggctcgc gtcgagcgga tcgaatacga cccgaaccgc accgggttca tcgctttgat
     3001 caaatatcag gatggcgaac tcgcctatat cctggcgccg cagcggcttg gcgagggtga
     3061 cacgattgtc gccggcgagc atgtggacgt gaagcccggc aatgccatgc cggtcggcaa
     3121 tatgccggtc ggcaccatcg tgcacaatgt cgagcttaag atcggcaagg gcgggcaact
     3181 cgcacggtcg gctgggtcct atgcgcagat cgtcggccgt gaccaggaat acgtcattct
     3241 tcgcctcaat tcgggagagc agcgtctcgt ccatgggcga tgcaaaggaa cggtcggcgc
     3301 ggtgtcgaat cccgaccaca tgaacatctc gataggcaag gccgggcgca agcgctggtt
     3361 gggtcgcatg ccgcataatc gcggcgtcgc catgaacccg gtcgatcatc cgctcggcgg
     3421 cggcgaaggc cgctcctcgg gcggccgtca cccggtgacg ccgtggggct tccccaccaa
     3481 gggcaagaag acccggacca acaagcgaac cacgaaattc atcatctcaa gccgccatgc
     3541 gcggaagaaa aagtaaggcg agggcaagat ggcgcgctcg gtatggaagg ggccgtttgt
     3601 cgacggttat ctgctcaaga aggcggaggc tacgcgggcg tcgggacggc atgacgtgat
     3661 caagacgtgg agccgccgct cgacgatcct gccgcaattc gtcgggctga ccttcggggt
     3721 gcataacggg cacaagcaca tccctgtgct ggtgaccgag gaaatggtcg gccacaagct
     3781 tggcgagttc tccccgaccc ggaccttcca cgggcattct tccgacaaga aggccaggcg
     3841 cgtgtcgacg ccgggcgccg ggtaagcgag gaaccagatg agcaagaccg cacatccgcg
     3901 cagccttgcg gacaacgaag cgaaagccgt tgcccggatg ctgcgcatca gcccgcagaa
     3961 actcaatctg gtagcgcagc ttatccgcgg caaaaaggtg caggccgcgc tcgcggatct
     4021 ggaattctcg cgcaaacgca tcgccaagga cgtgcgcaag tgcctggaat ctgcaatcgc
     4081 gaatgcggag aacaatcacg acctcgacgt cgacgatctg gtggttgccc gtgcccatgt
     4141 cggcaagggg cttgttatca aacgctttca cgcccgcggc cgcggccgcg ctggcaagat
     4201 tctgaagccg ttctcacact tgacgatcgt ggttcgccag gtcgaggcga gcgcttaggg
     4261 agttacccga tgggtcagaa agttagtccg acaggtctgc gtctcggcat caatcgcacc
     4321 tgggattcgc gctggtatgc cggcaaaggc gaatacggca agctgctgca cgaagatatg
     4381 gaaatccgtg aagagttggg caagcagctc aagcaagcgg cggtgtccaa gatcgtgatt
     4441 gaacggccac acaagaagtg ccgggtgacg attcattcag cgcggccggg cgtcgtcatt
     4501 ggcaaaaagg gtgcagacat cgagaagctg cgaaaggaag tggcgaagct caccgacagc
     4561 gatgtcgttc tcaatattat cgagattcgt aaacctgaac tcgacgccaa gcttgttgcc
     4621 gagtcgatcg cccagcagct tgagcgccgc gttgcgttcc ggcgcgccat gaagcgcgcc
     4681 gtgcagtcgg cgatgcggct cggcgccgaa ggcatccgca tcaactgctc gggccggctt
     4741 ggcggcgctg aaatcgcacg cctggaatgg tatcgggaag gccgggtgcc gctgcatacc
     4801 ttgcgcgctg acgtcgatta tggcgtcgcc accgccttca cgacctacgg cacttgcggt
     4861 gtcaaggtgt ggatcttcaa gggcgagatc cttgagcacg atccgatggc gcaggacaag
     4921 cgcatggcgg aaagcgatgc gggtcgcccg cgccgcgaca gctgacgcat cgaggtatct
     4981 tggaagtcta acagaggcaa agtgccatgc tgcaaccgat gcgcacgaaa ttccgcaagg
     5041 cgcataaggg ccggatcaaa ggcgctgcga cgagcggggc gacgctcagc ttcggccagt
     5101 tcggcctcaa ggccatggag cccgaccggc tcaccgcgcg ccagatcgag gcagcgcggc
     5161 gcgccatgac gcgtcacatg aagcgcgccg gccgggtatg gattcgcatc tatccggatg
     5221 tgccggtttc gaagaagccg cttgaggtcc ggatgggctc aggcaagggc gcgccggaat
     5281 tgtgggtggc gcggatcaag ccgggccgca tcctgtttga gatcgatggc gtttccacga
     5341 cgctcgctcg cgaggcgctc gatctcgccg ccgccaagct cccgattaaa acgcgattcg
     5401 tcgaacgcat tgctgagtaa gggacttaac cgatgctcaa aaccgaggac ctcagggcga
     5461 tgacgccgga tcagttggac gacgagctca tcaagctcaa gaaggagcag ttcaacctgc
     5521 ggttccagcg ggcgaccggc cagctcgcga acacgtcgcg ggtccgcgag gtccgtcgtg
     5581 acattgcccg catcaagacc gctgcgcagg gcaaacgcgc cgcaactgtg aagtgaggag
     5641 ccgatagatg ccgaagcgcg tattgcaggg cgaagtcgtg agcaacaaac aggccaagac
     5701 cgtggtggtg agggtcgagc gccggtttac gcacccggtc atgaagaaga cggtgcgcag
     5761 ctcgaagaaa tactatgcgc acgacgagaa caacaaatgc gtggtcggcg atcttgtgaa
     5821 gatcgaggag catgcgccga tctccaagct gaagcgttgg attgtggttg agggtgggca
     5881 gcaggcgaag tgagcgcgcg tggcgcgaaa agacagtgaa gcgaccgccc aaggcgcttc
     5941 tggcaaacgt aaataaagag gcgtcccatg attcagatgc agactaacct cgacgtggcg
     6001 gacaattccg gcgcgcggcg cgtcatgtgc atcaaggtgc tgggcggctc aaagcgcaaa
     6061 tacgccacga tcggcgacgt catcgtggtg tccgtgaagg aagcgattcc gcgcggccgc
     6121 gtcaagaagg gcgacgtgat gaaggccgtg gtggtgcggg tccgcaagga tattcgccgc
     6181 gccgacggct ccatcattcg attcgaccgc aatgccgccg tgctgatcaa tccccagatg
     6241 gagccagtcg gtacccgcat cttcggaccg gtgccgcgcg aattgcgcgc caagaaccac
     6301 atgaagatca tttcactggc gccggaggta ttgtgatggc tgcgaaaatt cgcaagggcg
     6361 acaaggttgt cgttctcacc ggccgcgata agggccgtac cggcgaagtt atcgaggtaa
     6421 atcccgcggc gtcgcgcgca ctggtgcgtg gcatcaacgt ggtcaaacgt caccagcgcc
     6481 agagcgcgca gcaggagggc ggcatcatct ccaaggaact gccgatccat ctgtccaata
     6541 tcgcaatcgc cgaccccaag gacggcaagc cgacgcgcat cggtttcaag atcagcggcg
     6601 accgccgcaa ggtgcgtgtc gccaagcgtt cgggagcaga gatcgatggc tgaccaggaa
     6661 gaaaagaagg ccaagaagcc cgcaaaggcc gccggcgagt ccaaagccgg caaggcgccg
     6721 aaggccgcca agaccacccc caagaccgct aagggtgaag tcgcaaagtc tgacggcgag
     6781 aaggccaaga agcccgccgc caagaccgat aaggcggaga agtccgcccc ggtcgaggcc
     6841 ggagcgccgc ctccaccacc acgcctgcgg atcatattcg acaccgtggt gcgcaaaaaa
     6901 ctgaccgagc aattcggcta caagaacgcc atgcaggtgc cggcgctcga caaggtcgtc
     6961 atcaacatgg gtatcggcga agcggtggcg gatcgcaaga aggtcgaatc agcggccaac
     7021 gatctcgcgc tgatttccgg ccagaaggct gttatcacca aatcccgcaa ggcgatttcg
     7081 acttacaagc tgcgtgagaa ccagccgatc ggctgcaagg tgactctgcg taaggcgcgc
     7141 atgttcgagt tcatcgaccg gttggtcaac attgcgctgc cgcgcgtacg cgacttccgc
     7201 ggcctcaacc cgaagagctt tgacggccgt ggcaactact cgcttggcct taaggagcac
     7261 atcgtttttc ccgagataga ttacgacaag gcggcggata tctggggcat ggacattacg
     7321 gtatgcacga cggcacgcac cgacgaggag gcgcgcgccc tgttgacggc cttcaacttc
     7381 ccgttccggc agtgaggatg gcgagatcct caaacgcgga tacctaggag acaagaatgg
     7441 cgaagacgag ttcgatcgaa aaaaaccacc ggcgacgcag gttgaccaag aagtttgccg
     7501 gcaagcgctc acggctcaag gcgattgcca acgacaagaa taagccgctc gaagagcgct
     7561 ttgatgccac cgtcaaactt gcggcgttgc cgcgcaatgg ctcggcgacc cgcatccgca
     7621 atcgatgcga ggtgacgggc cgtgcgcggg cgtattaccg caagctgaag atgagccgca
     7681 tcgcgatacg ggaactcggc gccaaggggc tgatccccgg gctggtcaag tcgagctggt
     7741 aaggagctcc gacgatgaat ttgaacgatc cgatcggcga tatgatcacc cgcatccgca
     7801 acgcacaaag ccggaccaag tcgaaggtgt cgactccggg ctcgaagctg cgcaagagcg
     7861 ttctcgacgt gcttaaaagc gagggctata tccgcgacta ttccacgttg gagcgcagcg
     7921 acggccgcac cgagttcgag atcgagctca agtatttcga cggcgcgcct gtcatccgcg
     7981 tgatcgagcg cgtgtcgaag ccgggacgac gtgtctatgt gtcggtgaag aatctaccgc
     8041 gcatcaacaa cggcctcggt gttgcaatcg tgtcgacccc caagggtgtg atggcggacc
     8101 atgctgcccg cgacgccaat gtgggcggcg agatcctgtg tacggtgttc tgaggggacc
     8161 gtcatgtcac gcatcggcaa gaaatcggtt ccgatcccgt ccggcgttac ggcgagcgtc
     8221 gaggggcaga cggtgaagat gaagggaccg aaaggcgctc tgcaatttgt tgcacccgac
     8281 gatgtcgcgg tgaagctgga cgagggcgcc atcaaggtcg acccgcggct cgacagtaag
     8341 cgcgccctcg ccatgtgggg gacttcgcgc accctgatcg ccaatctggt caccggagtt
     8401 accaaggggt tcgagagcaa gctcgacatc accggcgtcg gctatcgcgc tacggtccag
     8461 ggcaaaaacc tgcagatcgc gctcggctac agccacgatg tgatctatcc gatcccggat
     8521 ggcattgcga tcgcaacgcc gaggccgacc gaaatcgtgg tgaccggcat cgataagcag
     8581 aaggtcggcc aggttgccgc tgagatccgt agcttcaggc cgcccgagcc ctacaagggc
     8641 aagggtgtga gatattcggg cgaatacatt ttccgcaaag aaggcaagaa gaagtagcaa
     8701 caagccgaac gggatctgcc atgacgacca agcaagtcga gcggcgtaag gcacgcatca
     8761 gacgcaccat caagggggcc gcgggcgtgc ggccgcggtt gagcgtgttt cgctcctcga
     8821 agcacatcta cgctcaggtg atcgacgacc gcaaaggtgc gacggtggca gcagcgtcat
     8881 cgctcgaaaa ggacatgcgc ggcggcctca agaccggcgc cgatatcggc gccgccaagg
     8941 ccgtgggcaa actcgtcgcc gagcgcgctg tggcggctgg cgtcaaggat gtggtgttcg
     9001 accgcggcca ttatctttat cacggccgtg tcaaggcgct ggcggacgcc gcccgcgagg
     9061 gtgggctgaa tttttagcgc gggctccgat gaagttgaaa tatttggccg cgcagttgac
     9121 tgcctccccg caagcgggat gaggtaaaga agtgcgataa ggaaacggac attcgtcatg
     9181 gcacgtgaac gcgaacatcg agaccgggat cgggaagagc gggacagcga gttcaccgac
     9241 aagctcgtcc acatcaaccg tgttgccaag gtggtgaagg gcggccgccg ctttggtttc
     9301 gccgcgctgg tcgtggtcgg cgaccagaag ggccgggtcg gctttggcca tggcaaggca
     9361 cgcgaagtgc cggaagcaat ccgcaaggca accgatgcgg ctaagcgctc cctcgtgcgg
     9421 gtaccgctgc gcgaaggccg caccctgcat cacgacgtag agggccggca cggcgccggc
     9481 aaggtattct tgcgtgccgc ctctgcgggt accggcatca tcgccggcgg tccgatgcgg
     9541 gccgtgttcg agacgctcgg tatg
//
LOCUS       DATILV010000749        14221 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2738335, whole genome shotgun sequence.
ACCESSION   DATILV010000749 DATILV010000000
VERSION     DATILV010000749.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 14221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14221
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2738335"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            387..1628
                     /locus_tag="VLJ17_17875"
     CDS             387..1628
                     /locus_tag="VLJ17_17875"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSV24889.1"
                     /translation="MSDGFLHPETTLLAATQDCDVRDRSLGRVAACGPFDIRVLRAFD
                     ESYAPGGDWDRLLAGSRANTVFLLSGWLRAWHETLGQGVDLVLPQIRHQGRLVAAAAF
                     QVSDGIVEFAGKGPSDYSDVVVANDLEASVASTLVRSLIQEAQRSVHFKWGRLTGVPL
                     NESITPSAVFDRRSGLFATEERRIPAPAMDMDVVEERLQKKSLRRHERALERQGTLTC
                     ETYRDAERILPQLDEFFDQHVRRWQSTEWPSLFVAEPQRAFYRRFTEHLGRSGVLRFT
                     AVRLDGKLIAAHYGFLHAGRFIWYKPSFEPDIAKMSPGEVLLKRLLERARDEKAEEFD
                     FTIGDEAFKLRFATKTRQAVDIHLTGSKILALSRRARVRAREAGERLLGKQKLNAVVR
                     RVKNGVSGLRSARAYLSPNSS"
     gene            complement(1657..2514)
                     /gene="rlmB"
                     /locus_tag="VLJ17_17880"
     CDS             complement(1657..2514)
                     /gene="rlmB"
                     /locus_tag="VLJ17_17880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009029143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HSV24890.1"
                     /translation="MRERNSDHRRPGEPTRRVDRKAPGGNQFRGKGTGQPKAGRRHGA
                     RRGDDTVVLYGWHTVKAALENPQRHFRRLLATENAARRLTEDQINFPVAPTLVRPEDI
                     AAIAGAQAVHQGLYAEADPLPSPELENVVADGIVLAIDQITDPHNVGAILRTAAAFGV
                     TAVVTTERHSPEATGVLAKAASGALEYVPIATVVNLARALDELRELNTFLVGLDSAGE
                     ADLVATPLSAPLALVIGAEGKGLRHLTRARCDVVARLALPGRITSLNVSNATAVALYV
                     ASGKLATPT"
     gene            2683..3099
                     /locus_tag="VLJ17_17885"
     CDS             2683..3099
                     /locus_tag="VLJ17_17885"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HSV24891.1"
                     /translation="MKTSIFAATVTIGVAGIVLSAAPASSHHSGAMFEPEKVVTLEGV
                     VKEFEYTNPHSWLYVVVRDDKGAETLWGIEAEGPSALMRAGIKANALRPGDKVTVRTR
                     PLRDGRPAGAWVTVTTADGTVLNPRPGPIPASAPAN"
     gene            3126..4046
                     /locus_tag="VLJ17_17890"
     CDS             3126..4046
                     /locus_tag="VLJ17_17890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24892.1"
                     /translation="MQATHSNHSSMLRAKPRRRLLGAALLVSTAALVSCPASPAFSQH
                     KRVTPFGVAQAERANAAAALPNWSGLWTPVGGLIFDPSTADPKGNNAQQPGDREHPPY
                     NAEWEAKYKAKLDHTLAGYFTDPITNCLPHGMPRLMGGIPGPLEFVVTPEITFIIWEY
                     GPQLRRIYTDGRDHLPVEERFDSWTGHSIGHWDGDTLVVDTVSMRGDTPYDRTGAPHS
                     NKVHLIERMRLVDKDIFENDMTIEDPVAFTAPWRVNRRYRRLPSDTFVSDVACNETQH
                     SPIVNGQTQFILPDDPPGYLLGPMPLPPKQ"
     gene            4043..4963
                     /locus_tag="VLJ17_17895"
     CDS             4043..4963
                     /locus_tag="VLJ17_17895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012589660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HSV24893.1"
                     /translation="MRIGIDLGGTKIEAIALDGDGIPLLRHRVPTPAADYPVILQSIV
                     DLVDFVEIELGHTGMVGIATPGAISSSTGHIKNSNSTALNGRPLDRDLSIKLGRPIRM
                     ENDANCFALSEAVDGAAATEQVVFGVILGTGVGGGIVVNKKLIAGRNGIAGEWGHNPL
                     PWTPDHELQNAPCYCGRLGCVETFLSGAGLSREYRLRSGVDLTPPEIVLASAAGDEKA
                     GQCLDAYQERLARGLAGVINVLDPDIIVLGGGLSNLTQLYTGLPGLIGKYVFSDYIDT
                     PIVPAVHGDSSGVRGAAWLWPAACEIATRK"
     gene            complement(5407..5904)
                     /locus_tag="VLJ17_17900"
     CDS             complement(5407..5904)
                     /locus_tag="VLJ17_17900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020176384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HSV24894.1"
                     /translation="MFTKAGAVAGTITLAVVPCASNAQVQMQRDITWKLGLAIAEGAI
                     EECAKTNVGISVAVVDRAGRVRIFIASDNPSPHNFELARRKAYTARTFRRPSLEWAQQ
                     TKDGADLAAQRQLADVIALGGGVPINVGNDTIGAVGVSGSSQTGDEACAKAGIAKVAD
                     QLNTN"
     gene            6324..6512
                     /locus_tag="VLJ17_17905"
     CDS             6324..6512
                     /locus_tag="VLJ17_17905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24895.1"
                     /translation="MKSECNFYLDRAAKCLDMAEHVDKQYRGDLLQIARGWVQLAKEE
                     EAELEKLPSTDGPQTALW"
     gene            complement(6598..7602)
                     /locus_tag="VLJ17_17910"
     CDS             complement(6598..7602)
                     /locus_tag="VLJ17_17910"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV24896.1"
                     /translation="MRTVAIEEHFTIPALIRRIDPNAISRRGFRPRKTPQNGPNPLEL
                     LPEIGERRLQSMDEAGITVQVLSNSGPGPDLVPGTDGIAISREMNDYLATAIARHPDR
                     FAGFSALPMQEPDAAAGELARTVKELGFLGAVINGTTDGRFLDHPSYDGLLATAVELD
                     VPIYVHPHLPPEPVRQAYFADLPAGAGRVLESAGWGWHSETAIHVLRMVVAGTLDRHP
                     RLKLIIGHMGEMLPMMLARADDVFALDVDHLSRPVSRAILDQVWLTTSGIFSEPPFLA
                     ALQTFGIDRIMFSVDYPFAPNAKGRAFLDRISLAPADMAKLTHGNVDALLRLKQISGK
                     "
     gene            7833..8054
                     /locus_tag="VLJ17_17915"
     CDS             7833..8054
                     /locus_tag="VLJ17_17915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24897.1"
                     /translation="MNAFTRYTDVTTCCAFCSKLLPIVNGEVVPWRASNGQFFCNEFC
                     ADDAEEMRFQSRGRTGRIADDRITLESIR"
     gene            8504..8701
                     /gene="secE"
                     /locus_tag="VLJ17_17920"
     CDS             8504..8701
                     /gene="secE"
                     /locus_tag="VLJ17_17920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HSV24898.1"
                     /translation="MAKVSPFKFLQEVRQEAAKITWPSRRETTITTVMVFVFATLAGL
                     FFLLADQVIRMTVTLVLGIGS"
     gene            8702..8824
                     /locus_tag="VLJ17_17925"
     CDS             8702..8824
                     /locus_tag="VLJ17_17925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24899.1"
                     /translation="METLETAFVVVLWTLSAAAFLLAADQTIRVVVTFVLGISG"
     gene            8849..9379
                     /gene="nusG"
                     /locus_tag="VLJ17_17930"
     CDS             8849..9379
                     /gene="nusG"
                     /locus_tag="VLJ17_17930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HSV24900.1"
                     /translation="MAKRWYIIHAYSNFENKVAESIREQAKQRGLSDLFEEVMVPKEK
                     VVEVRRGRKVDAERKFFPGYVLAKMDLTDEAFHLIKNTPKVTGFLGADNKPMPISDVE
                     AARILHQVQEGIERPKPSVSFEVGEQVRVSDGPFASFNGVVEEVDEARSRLKVAVSIF
                     GRATPVELEFGQVEKG"
     gene            9662..10090
                     /gene="rplK"
                     /locus_tag="VLJ17_17935"
     CDS             9662..10090
                     /gene="rplK"
                     /locus_tag="VLJ17_17935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HSV24901.1"
                     /translation="MAKKVTGYLKLQVPAGSANPSPPIGPALGQRGLNIMEFCKSFNA
                     QTQKLEKGSPIPVVITIYADRSFTFEMKTPPVSFFLKKAAGIQAGAKAPGRDKAGTVT
                     KAQVKEIAQQKMKDLNCDSVESAMRMIEGSARSMGLEVRE"
     gene            10096..10812
                     /gene="rplA"
                     /locus_tag="VLJ17_17940"
     CDS             10096..10812
                     /gene="rplA"
                     /locus_tag="VLJ17_17940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019998962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HSV24902.1"
                     /translation="MASHGKRVVKARQGIDREKLYALDEAVKMIKDRANAKFDETIEI
                     AMNLGVDPRHADQMVRGVVALPNGTGRTQRVAVFARGAKADEARAAGADVVGAEDLVE
                     RVTGGNIDFDRCIATPDLMPLVGRLGKVLGPRGMMPNPKVGTVTMDVAGAVKASKGGS
                     VEFRVEKAGIVHAGVGKASFPAEKLVENIKAFADAVQKAKPQGAKGHFINRIAISSTM
                     GPGVKIELASVMVSAGATTH"
     gene            11089..11427
                     /locus_tag="VLJ17_17945"
     CDS             11089..11427
                     /locus_tag="VLJ17_17945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24903.1"
                     /translation="MAAVFGLFGAALFTFATGNVLPSPLVWLAAAIAAAVMDRRPVRP
                     DAKFWVPAGIAANCYLQVATLVRDAISGVPEFSPDDLKLLRFLLDRALRPLLRRKSSD
                     ALAWRLSQEN"
     gene            11431..11820
                     /locus_tag="VLJ17_17950"
     CDS             11431..11820
                     /locus_tag="VLJ17_17950"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018264856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HSV24904.1"
                     /translation="MTAQLRAFGLTIVERLRSFRCAAAGIAFMLRTQHNAWVHLIVTG
                     AVLATGWRLGLSGADWRWIMVAIVLVWLAETMNTAFEFVCDVVSPQFDISVRTAKDIA
                     AGAVLICAGGAVVIGLLTFWPYLSSGV"
     gene            12432..12950
                     /gene="rplJ"
                     /locus_tag="VLJ17_17955"
     CDS             12432..12950
                     /gene="rplJ"
                     /locus_tag="VLJ17_17955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HSV24905.1"
                     /translation="MDRAAKKDLVAELNGVFKASSVVIVAHYAGLTVADMQKLRMQMK
                     HAGAQVKVAKNRLAKIALDGTDVAVVAPLLKGPTVIAYSGDPVAAPKAASDFAKANDK
                     FVILGGAMGKTALNPDAVKALAALPSLDELRAKLIGLVQAPATKIAQLVNAPAAKVAR
                     VVQAYASKGEAA"
     gene            13000..13377
                     /gene="rplL"
                     /locus_tag="VLJ17_17960"
     CDS             13000..13377
                     /gene="rplL"
                     /locus_tag="VLJ17_17960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003597539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HSV24906.1"
                     /translation="MADLSKLVDQLSSLTVLEAAELAKLLEEKWGVSAAAAVQVAVPG
                     FGGPAAAPVEEKTEFTVVLASAGEKKIEVIKEVRALTGLGLKEAKDLVEGAPKNVKES
                     VSKDEAEKVKAQLEKAGAKVELK"
     gene            13782..>14221
                     /locus_tag="VLJ17_17965"
     CDS             13782..>14221
                     /locus_tag="VLJ17_17965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HSV24907.1"
                     /translation="MAQTFTGRKRVRKFFGKIEEVAEMPNLIEVQKASYDQFLLVKEP
                     HGGRPDEGLQAVFRSVFPISDFSNTAQLEFVRYEFEAPKYDVDECRQRGMTYAAPLKV
                     TLRLIVFDIDEETGARSVKDIKEQDVYMGDIPLLTNNGTFIVNGT"
BASE COUNT         2788 a         4151 c         4485 g         2797 t
ORIGIN      
        1 ggtcgccaag ctattttgct gcatcctgtg gcggtgcgcc catcagcatc attcgccaat
       61 acatcgaacg gcagagaaac ccgcaatcag actcatatcg ggccaacgcg cctcggcgca
      121 tatctcccgc gtgaaacccc ggagcttgct gcgctaaaat tcttggtcag tgtcagccat
      181 cggtattgcc agactcagga gctgttgcct tcgggcaggt cgtcgcgccc gtttctagaa
      241 aatcgatgac ggcacccaat actaggggca attacccagg tataaaacct gatttgattc
      301 ctacagcacg gcacttcact ctccctggca acgcgccgtt agattcagga aaagcagttg
      361 gaatggcgtc gtgacgagag ggcacgatgt ctgacggctt cctgcatcca gaaacaaccc
      421 tgttggccgc aacccaagat tgtgacgtcc gtgacaggtc tctgggaaga gtggcggctt
      481 gcggaccgtt cgatattcgc gtgctccgcg cctttgacga gagctacgcc cccgggggtg
      541 actgggaccg actgctcgcc ggctcaaggg cgaacaccgt gttccttttg tccggctggc
      601 tgcgcgcgtg gcacgagacc ctcggccagg gggtcgatct cgtccttccg cagattcgcc
      661 accagggccg actcgtggct gccgccgcct ttcaggtcag cgacggcatc gtcgagtttg
      721 ccgggaaagg cccctccgac tatagcgacg tcgtcgtggc gaatgacctt gaggcgtcgg
      781 tagctagtac cctcgtccgc tccctcattc aggaagcgca gcgcagtgta catttcaagt
      841 ggggccggct gaccggcgtc cctctcaatg agagcatcac cccctcggca gtcttcgacc
      901 gccgcagcgg actcttcgct actgaggaaa gacgcatccc ggcgccagcg atggacatgg
      961 acgtcgtaga ggagaggctg cagaagaaga gcttgcgccg gcacgagcgc gctctcgaac
     1021 gccagggaac gctcacctgc gagacctatc gcgatgccga gcgaatcctt ccgcagctcg
     1081 acgagttctt cgatcagcac gtccggcgtt ggcaatcgac ggaatggccg agcctcttcg
     1141 tcgccgagcc tcaacgtgcc ttctaccgca gatttacgga acatctcggc cgctcgggcg
     1201 tgctgcgctt cacagcggtg cgcctcgacg gcaagttgat cgcggcgcac tatggcttcc
     1261 tccacgcggg acgttttatc tggtacaagc cgtcgttcga acccgacatc gccaagatgt
     1321 cgcccgggga agtcctgctc aagcgcctcc tcgaacgcgc gcgagacgag aaggctgagg
     1381 agttcgattt tacgatcggc gacgaggcat tcaagctccg cttcgcaacg aagacacgcc
     1441 aagccgtcga catacacctg acgggctcca agattttggc tctgtccaga cgagcgcgcg
     1501 tccgagcgag ggaagccggg gagcggttgc tcgggaaaca gaagctgaat gccgtcgtgc
     1561 gccgagtcaa aaacggggtg tcaggcttga ggtctgcacg ggcatatttg agtccgaaca
     1621 gcagttagct aacctagcgc tcatggcgct gacatttcat gtcggcgtag caagcttccc
     1681 actcgcgacg taaagcgcaa cagcagtggc gttcgacaca ttgaggctcg tgatccgccc
     1741 gggcaatgcg agccgcgcga caacatcgca gcgggcgcgg gtgagatgcc tcaggccctt
     1801 gccttcagcg ccgatcacga gggcgagggg ggcagacaac ggtgtggcca caagatcggc
     1861 ctcaccggcg ctgtcgaggc cgaccagaaa cgtattgagc tcgcgcaact cgtcgagtgc
     1921 gcgggcaaga ttgacgacgg tggcgatcgg cacgtattcg agtgcgccag acgccgcctt
     1981 ggcgagcacg ccggtcgcct ccggactatg gcgctccgtc gtcaccacgg cggtcacgcc
     2041 gaatgccgcc gcagtgcgca ggatcgcccc tacattgtgc ggatcggtga tctggtcgat
     2101 cgccagcacg atgccatccg caacaacgtt ttcgagttcc ggcgaaggca ggggatcagc
     2161 ctcggcataa aggccctggt ggacggcctg tgccccggcg attgccgcaa tgtcttcagg
     2221 gcgcaccagc gtgggcgcga cgggaaaatt gatttggtcc tcggtcagtc gtcgtgctgc
     2281 gttttcggta gcgagcaggc gacggaaatg gcgctgcgga ttttccagcg cggccttgac
     2341 ggtatgccag ccgtaaagaa ccacggtgtc gtcgccacgc cgcgcgccgt gccggcgtcc
     2401 ggccttgggt tggccagtgc ctttgcccct aaattggttg ccgccgggag ctttacggtc
     2461 gacccgccgg gtcggctcgc cgggtcggcg gtgatcggaa ttgcgctcgc gcatggggcg
     2521 ttgtgtcacg ccgacgacgg cttggcaatt tcgcgctgga gtcgggcgta ccgttgcgtg
     2581 acggcctgtt gatggaaacg atcggcggac tatgattgaa tgcttcagcc gatcggccgc
     2641 cgctgcgcgc gcaaaccgaa aaaaccgaaa gggacgaatg cgatgaaaac ttcaattttc
     2701 gctgccaccg ttaccatcgg tgttgccggc attgtgttga gcgcggcgcc ggcttcgtca
     2761 caccattcgg gggcgatgtt cgaacccgaa aaggtcgtga cgctcgaagg cgtcgtgaag
     2821 gaattcgaat acactaatcc gcattcctgg ctttatgtcg tggtgcgtga cgataagggc
     2881 gccgagacct tgtggggcat cgaagccgaa gggccaagcg cactgatgcg ggccggcatc
     2941 aaggcaaatg cgctgcggcc gggtgataag gtcacggtgc ggacccgtcc gttgcgcgat
     3001 ggccgtccgg cgggcgcctg ggtcacagtc accacggcag acggcaccgt gctcaatccg
     3061 cgcccgggcc cgatcccggc ttcggcgccc gcgaactgat ctggcgagct ctggagcgcg
     3121 tttcgatgca agccacccac tctaaccaca gctcgatgtt gcgggcgaag ccgcgccgcc
     3181 gcctccttgg ggccgccctg ctagtgagca cggccgcgtt ggtgtcgtgc ccggcttcac
     3241 ccgccttctc acagcacaag cgcgtcacgc cgtttggcgt tgcgcaggcc gagcgtgcca
     3301 acgcggccgc agccctgccc aactggtcgg gtttgtggac accggtgggc ggcctgatct
     3361 ttgatcccag cacggcggat cccaagggca acaatgcgca gcagccgggc gaccgcgagc
     3421 atccgcccta caacgccgag tgggaggcca aatacaaggc caagctcgat cacacactcg
     3481 ccggctactt taccgacccg atcaccaatt gcctgccgca cggaatgccg cgcctgatgg
     3541 gcggcattcc cgggccgctc gaattcgtgg tgacgcccga aataaccttc atcatctggg
     3601 aatacgggcc gcagctgcgc cgcatctaca ccgacggccg cgaccacctg ccggtcgagg
     3661 agcgcttcga ttcctggacc gggcactcga tcggccattg ggatggcgac acgctggtgg
     3721 tggatacggt gagcatgcgc ggtgacacgc cctatgaccg caccggcgcg ccccacagca
     3781 acaaggtgca ccttatcgaa cgcatgcgcc tcgtcgacaa ggatatcttc gagaacgaca
     3841 tgaccatcga ggatccagtt gcgttcacag caccgtggcg cgtcaaccgc cgttaccggc
     3901 gccttccgtc cgatacgttc gtcagcgacg tggcctgcaa cgagacccag cacagcccga
     3961 tcgtcaatgg ccagacccag ttcatcctac ccgacgaccc gcccggctat ttgttaggcc
     4021 cgatgccgtt gccgccgaag caatgagaat tgggatcgac ttagggggca cgaagatcga
     4081 ggcgatcgct cttgatggcg acggcatacc gctcttacgg catcgggtgc cgacgccggc
     4141 agcggattat cctgttattc tccagagtat cgtcgatctc gtcgactttg ttgagattga
     4201 attgggccac accggcatgg taggaatcgc cactcccgga gcgatttcgt catccaccgg
     4261 ccatatcaag aattccaaca gcaccgccct gaacgggagg ccgctcgacc gggacctttc
     4321 aattaagctt ggccggccga tccggatgga aaatgacgcg aactgctttg ctctttctga
     4381 agcggtggat ggtgctgcgg caacggaaca ggtggtgttc ggagtgatcc tcggaacggg
     4441 tgtcggcggc ggcatcgttg tcaacaagaa actcatcgcc gggcgtaatg ggattgccgg
     4501 agaatggggc cacaacccgt tgccttggac accggatcac gaactgcaga acgcgccctg
     4561 ctactgcggg aggttggggt gtgtggagac ctttctgtca ggcgccggtc tttcgcgcga
     4621 ataccggttg cgttccggcg tcgacctaac cccgcctgaa attgtcctcg cgtccgccgc
     4681 cggagatgaa aaagccggtc aatgcctgga cgcttatcag gagcgactag cgcgtggttt
     4741 agcaggcgtc attaacgtgc tcgacccgga tatcatcgtt cttggcggag gcctttccaa
     4801 tttaacgcag ctctatacag gactgcctgg cctcatcggc aaatatgtat tctccgatta
     4861 catcgacacg ccgattgtgc ccgccgttca tggagattcc agtggggtgc ggggtgcagc
     4921 atggctttgg cctgcggctt gcgagattgc gacgagaaaa tagccggatg ttgagtgaac
     4981 acgacgggtt tcggggcaag gcgcgcggat ggccgcgtcc gcccatgact cggaaaagct
     5041 gatagacatc aattcgtgtt gagctggtcg gccaccttcc acgtggcgca aagcgctctg
     5101 tgagccgcaa cgtttaccca ggtgaagccg agccagcggc ggcgcggccc gccgctccga
     5161 agaaccaggt tgcgtgatca atgttgtgga atcgagcgac ataacgtcgg gatggttggc
     5221 cagcagcact tctgcgtcga cggcaccctc ccaaagctca ggaggactgc caaagagccg
     5281 gcgaacaaag cggcctccca agcccttgct gaccagaact tctcctcatg tacggcgata
     5341 accagggcct gcctccagcc aggctcactc actgttctcg cctccgctaa atcgaaatga
     5401 tcgacgtcag ttcgtgttga gctggtcggc caccttggcg ataccggcct tggcgcaggc
     5461 ctcgtcgccg gtctggctcg agccgctgac gcctacagcc ccaatggtgt cgttgccgac
     5521 gttgatcggc acgccgccgc ccagcgcgat cacgtcagca agctggcgct gtgcggccaa
     5581 atccgctccg tccttggtct gctgcgccca ttcgagcgac ggccggcgga acgtgcgggc
     5641 cgtataggcc ttgcgtcgcg ccagctcgaa gttgtggggc gacgggttat cggacgcaat
     5701 gaagatacgc acccggccgg cgcggtcgac gaccgctacc gagatgccga cattggtctt
     5761 cgcgcattcc tcgatggctc cctccgcgat ggcgagaccc aacttccagg taatgtcgcg
     5821 ctgcatttga acctgggcgt tcgaggcgca aggaaccacc gcgagcgtga tcgtgcccgc
     5881 caccgcaccg gcctttgtga acatgaacaa tcctcccgtc aggacgttgt agagcttatg
     5941 agggcgggga gcgtggccgc agccgtggtc gtctcattcc cgccgcttca attaaaggcc
     6001 tttgcggtgc cacaatgcaa gaagccaaaa gcgcagaaat ccccgtcctg ccgcccttta
     6061 agcgtgtaca ggcgcgacgc tatacctcta tcgattgcga agatgcgcca attgaggcaa
     6121 accttgggcg gatttctaac gcaattttgc cgagaatttc gtgtccaaag gagaggtcaa
     6181 ccaattcgtt gacacttcgg cttggccttg cccccacacc ggctcggcca tcctcttttg
     6241 agcctccgaa ctgggaagcc cggtgttgac cgagccggag tccagttctt ggggttgggc
     6301 cacaggtagc agaagggtgg gacatgaagt cggaatgcaa tttctacctt gatcgtgcgg
     6361 ccaagtgtct cgacatggcg gagcatgtcg acaagcaata ccgcggagat ttgcttcaga
     6421 tcgcgcgcgg atgggtccaa ctggccaagg aggaggaggc agagttggag aaactgccgt
     6481 caaccgatgg ccctcaaaca gccttgtggt agaacaaacg gtgccatttg cctccccgga
     6541 attgatccgg ggaaccatcc ccaatccgcc ccgttttaac ggggccacgg acccgctcta
     6601 tttccccgaa atctgtttta gccgcaacag cgcatccacg ttgccatgcg tgagcttggc
     6661 catgtcggct ggcgccagcg agatgcggtc caggaaggcg cgacccttgg cgttcggggc
     6721 gaaggggtag tcgaccgaga acatgatgcg atcgatgccg aacgtctgga gtgcagccag
     6781 aaacggtggt tcgctgaaaa ttccgctggt ggtgagccag acttggtcca aaatggcgcg
     6841 gctgaccggc cggctcaggt gatcgacatc gagggcgaag acgtcgtctg cgcgcgccaa
     6901 catcatcggc agcatttcac ccatatggcc gatgatcagc ttgagccgcg gatgtcgatc
     6961 cagcgttccg gcaaccacca tgcgaaggac atggatcgcc gtctccgaat gccagcccca
     7021 gccggcactc tccagcaccc gtccggcacc cgccggcaga tcggcgaaat aggcctgccg
     7081 tacgggttcg ggcggaaggt gaggatggac gtagatcggc acatcgagtt ccaccgcggt
     7141 cgccaggagg ccgtcatagc tcgggtggtc gaggaagcgg ccatccgtcg tgccattgat
     7201 gaccgcgcct aggaagccca gctccttcac ggtgcgcgca agttcaccag cagcagcgtc
     7261 tggctcctgc atcggcagcg cactgaaacc cgcgaaacga tccggatggc gggcaatggc
     7321 cgtcgccaag taatcgttca tctcccggct tatcgcgatt ccgtccgtac caggaacgag
     7381 atcagggccg gggccgctgt tggaaagcac ctgcaccgtg atgccggcct cgtccatcga
     7441 ttgcagccgg cgctcgccga tttcgggaag gagttcaagc gggttggggc cgttctgagg
     7501 cgtttttctc ggccgaaatc cgcgacggct aattgcgttc ggatcgatac ggcggatcag
     7561 cgccgggatc gtaaagtgct cttcgatagc gacggtgcgc ataagcgtgc tttgctccgt
     7621 ttactctgag aatgctgcat cccatctata ctgagcatca caagggttcc ggttgcgttc
     7681 gtgtcctttt ctaggcaggt gtgtcatttg tgcaaccttt gtgggaaacc gactgtgtta
     7741 tggcgacgcc cgccgaacca attgaacggc agattcgcct gagcttacga ctaaagctta
     7801 cgactcggcg tcgtgacacc aaggggattt tgatgaacgc attcactcgc tacaccgacg
     7861 taacaacatg ctgtgcgttt tgtagcaagt tgctgcccat cgtaaatggc gaggtggtgc
     7921 cctggcgggc ttcaaacggc cagttcttct gcaacgaatt ctgcgccgac gatgccgagg
     7981 aaatgcgctt tcaaagtcgc ggtcggacgg gcagaattgc cgacgatcgg atcaccctcg
     8041 aatcgatacg atagatttat ttcaagctcc gcggctttcg gaatggtgcc gcgcgcgtgc
     8101 gtggcgacct tgtcgccccc gtatcagggg ttggccaaag cggctcttgt ctacttctga
     8161 actccacacg gaccggcgaa ccagggctgg caaactcggc tgaccttccc gacataaggg
     8221 agcaggcccc gcgggtgacg gattgtgatt aaacgcacat ttcgggcggc gacttgattt
     8281 cgccggcggc aagcagtagg aagcgttatc gcctgcggcc cggtttcgga cttccgcggc
     8341 gatggtatcc ccacaaacga gcccgcgagc ggtctcatcc ggcaaggatt gggcaagagc
     8401 ggatttgtgt ggattcccgc ggagtggcaa tttgagccgc gggaatccgg aagcaacatc
     8461 tggaatcgac acagctgaaa tcgcgacggt tggaatcgac acgatggcaa aagtcagtcc
     8521 atttaagttt ttgcaggaag tgcgccagga ggcggccaag atcacgtggc cgagccgccg
     8581 cgagaccacc ataaccaccg tcatggtgtt cgtgttcgcg acattggcgg gcttgttctt
     8641 cctgctggcg gatcaggtga tccgcatgac ggtgacgttg gtgcttggga tcggcagttg
     8701 aatggaaacg ttggaaacgg cgttcgtggt ggtcctttgg acgctctctg ccgcggcgtt
     8761 cctcttggca gcagatcaga ccattcgtgt agtggtgact ttcgtgctcg gcatcagcgg
     8821 ctgaatgaaa acctcgggaa caacggctat ggccaaacgc tggtacatta tccacgccta
     8881 ttcgaatttt gaaaacaagg ttgcggaatc gatccgcgag caggcgaagc aacgcggtct
     8941 gtctgatttg ttcgaagagg tgatggtgcc gaaggaaaag gtcgtggagg tgcgccgcgg
     9001 tcgcaaagtc gatgccgagc gcaaattctt tcccggctat gtgctggcga agatggatct
     9061 caccgacgag gccttccatc tcatcaagaa caccccgaaa gtaacgggct ttcttggcgc
     9121 cgataataag ccgatgccga tctcggacgt ggaagcagcc cgcatcctgc atcaggtcca
     9181 ggagggtatc gagcggccga agccctcggt gtccttcgaa gtcggcgagc aggtccgggt
     9241 gtcggatggt cccttcgcat ccttcaacgg cgtggtggag gaggtcgacg aggcgcgctc
     9301 gcgcctcaag gtcgcggtgt cgatcttcgg ccgcgccacg ccggtcgaac tggagttcgg
     9361 gcaggtggag aaggggtagg gcgcgttgcg attgggtttt gctgcgcgct acccacgcat
     9421 ttcgcgtccg cccgtgaaaa aagggcttgc atccgacgcc attgcgatta agtgacggcg
     9481 ttgcctctgc gtttcgctca tccgggcagg gggcggttcg gaaaacccga gccggaagga
     9541 tgttgtggga ggtgacgggc ggctgccaac cgttcgttcg agccgaaacc acgaacccgg
     9601 cgcccctgcc ctccctcgct agagggggag ggaagggagg gggcgccgca aggagttgtt
     9661 catggcaaag aaagtcaccg gctatttaaa gctacaggtg ccggcgggtt ctgcaaaccc
     9721 gtcgccgccg attgggcccg cgctcggtca gcgtggtctc aacatcatgg agttttgcaa
     9781 gtccttcaac gcccaaaccc agaagcttga gaagggttcg ccgatcccgg tggtcatcac
     9841 catctacgcc gatcgctctt tcacgttcga aatgaagacg ccgccggtct ctttctttct
     9901 caagaaggca gccggcatcc aggcaggagc caaggctcca ggccgtgaca aggcgggcac
     9961 cgttaccaag gcgcaggtca aagagatcgc ccagcaaaag atgaaggatc tcaactgcga
    10021 ctccgtcgaa tccgcgatgc ggatgatcga gggctccgcc cgttcgatgg ggctcgaggt
    10081 gagggagtaa cgatcatggc gagccacgga aagcgtgttg taaaggcccg ccagggcata
    10141 gatcgggaaa agctctatgc cctcgatgaa gccgtgaaga tgatcaagga ccgtgccaac
    10201 gcaaagtttg acgagaccat cgagatcgcc atgaatctgg gcgttgaccc ccgccatgcc
    10261 gaccagatgg tgcgtggcgt cgttgccctg cccaacggca ccggccgaac gcagcgagtg
    10321 gcagtattcg cgcgtggcgc caaagcggac gaagcgcgtg ccgccggcgc cgatgtggtg
    10381 ggggctgagg acctggtcga gcgggtcacc ggcggcaaca tcgatttcga ccgctgtatt
    10441 gcaacgcccg acctgatgcc cctggtgggg cgactcggca aggtgcttgg gccacgcggc
    10501 atgatgccga atcccaaggt cggcacagtg accatggacg tcgccggtgc cgtcaaggcc
    10561 tcgaagggcg gctccgtcga attccgcgtc gagaaggccg gtatcgtcca cgccggtgtc
    10621 ggcaaggcat cgtttccggc cgagaagctt gtggaaaaca tcaaagcatt tgcggatgca
    10681 gtgcagaagg cgaagccgca gggcgctaag ggccacttca tcaaccggat cgccatctct
    10741 tccaccatgg gcccgggtgt aaagatcgag ctggcgagcg taatggtgag cgccggggcc
    10801 accacgcact gatggaagcg ggcccgtaaa aggggcgccg gagtggattc cggtgcccgt
    10861 ttcatgatgg gcaatctgcc gacgtctcaa gcgctactgc ccgaacgtga cgccacgttg
    10921 ggggcgtgtt gctcggctac ggcgtcctct cgattgctgg tcttggtcta tctcaatcac
    10981 ccccggccct tcccgggcaa gtgtttggcc tcggattgat gttgccggga ggggggcttc
    11041 cttgcccatg tcggtacaag tgaagccagc actgcgcata ttgtcgcggt ggctgcggtg
    11101 tttggcctgt tcggggcggc gctcttcacg tttgcgaccg gcaatgtgtt gccgtcgcca
    11161 ttggtttggc tcgccgccgc cattgccgct gcagtgatgg accgtaggcc ggtgcggccc
    11221 gacgccaagt tttgggttcc ggccggaatt gccgcgaact gctatttgca ggtcgcgacc
    11281 ttggtacgcg atgccatctc gggtgtgccg gaattttcgc cggacgatct caagttgctg
    11341 cgtttcctgc tcgatcgcgc gttgcggccg ctgctcagac gcaagtccag tgacgcactt
    11401 gcttggcgtt tgtctcagga gaattgaacc atgacggcac agctgcgggc cttcgggctt
    11461 acaatcgtgg agcggctgcg cagctttcgc tgtgcggctg ccggcatcgc ctttatgctg
    11521 cgcacacaac acaatgcctg ggttcacctc atcgtcacgg gtgcggtatt ggcgaccgga
    11581 tggcgccttg gcctcagtgg tgcggattgg cggtggatca tggtcgccat cgtgctggta
    11641 tggttggcgg aaacgatgaa cacggcgttt gaattcgttt gcgatgtggt ctcgccgcaa
    11701 ttcgacattt cggtgagaac cgccaaggat atcgctgctg gtgccgtgtt gatttgcgcg
    11761 ggcggcgcgg tggtgatcgg gctgttgacg ttctggcctt atctatcaag tggcgtttga
    11821 gaatggtggt tgctgacccg ccgttgatcc cactatgggc gatattcggc aaaccgcctt
    11881 ataaaaaacc acgccttata aaaaccactt ggcaatgctc tccggaaccg ctaagtaagt
    11941 accgatggcg cgccggccct ttgggggcgg cgggcttttg tgcgcttttt agcaaaattg
    12001 gaaatcagga atcttttcct tgtcagacgt cccgccggat ctatctgaag ggaagaggca
    12061 gggggttcaa tttgccgcga tgaatgcgcg cagccatccg gcggtttccg ggtggcgtcc
    12121 tgtccgagac tgcaggtgtc cgagcatcgc gagggcttaa ttccgagggc tgtcacttaa
    12181 gcttcagtcc tgcacagacg ggtgaagatc ggtttcgagg ggtaaaaccc tctacggttg
    12241 atccttcaga ccttggcgac gctcctttga tggcgtgtcg gttcaagggg acagggcatg
    12301 aggagcgtcg tatcgccctc ggcctttagt gcgcggggac ggtgcggcaa gtcgtaaacc
    12361 ggcggcttaa gccgaacgca tccggggagc aatcccagga tgggcgaatg ccgctaaccg
    12421 gagagagtca agtggaccga gcggcaaaaa aagatctggt cgcggaactg aacggggtct
    12481 tcaaggccag cagcgttgtg attgtcgctc actatgccgg acttaccgtt gccgacatgc
    12541 aaaagctgcg tatgcagatg aagcacgccg gtgcccaggt gaaggtcgcc aagaaccgtc
    12601 tcgccaagat cgctctggac ggcaccgatg tggccgtggt cgccccgctc cttaaggggc
    12661 cgaccgtgat tgcctattcg ggagatccgg tggctgcccc gaaggccgcc agcgatttcg
    12721 ccaaggctaa cgacaaattc gttatccttg gcggagcgat gggcaagaca gccttgaacc
    12781 ccgatgccgt caaggcgctc gcggcactgc cgtcgcttga tgaattgcgt gccaagctca
    12841 tcggcctcgt tcaggcgccg gcgaccaaga tcgcccagct tgtcaatgcc ccggccgcca
    12901 aagttgccag ggtggttcag gcctatgcca gcaagggcga agccgcttga cgaaggtcac
    12961 caagcttatt gaagttcgaa cctgaaggat atgaatgcaa tggctgattt gtcgaaactg
    13021 gtagatcaac tctcgagcct cacagtgctg gaagccgctg aactcgctaa acttttggaa
    13081 gagaagtggg gagtttcggc agccgccgcg gtccaggttg cggtcccggg ctttggcggt
    13141 cccgccgccg ccccggtcga ggaaaagacc gaatttaccg tggtgctggc ttcggccggc
    13201 gaaaagaaga tcgaggtcat caaggaagtc cgggcgctca ccgggctcgg ccttaaggaa
    13261 gccaaggacc tggtcgaagg cgcgcctaaa aacgtcaagg aaagtgtatc caaggacgag
    13321 gccgaaaagg tcaaggccca attggagaag gcgggcgcca aggtggagct caagtaggcg
    13381 atctggtcaa gaatttgctt caagcctgca caggaggaaa ttgcgcaaga cgccggcgcg
    13441 ggccggcgga aagcgccgca cgccagcgaa tgcaggccgc ggtgccgaat gggtgtggcc
    13501 gaggtgccct cggccgtcca gttgtggtga ttgacgaacg gacacctata tatggttttt
    13561 gcttggccga aatcactgca tggcgccgca tccaaagcgt tacgagttcc gaattccatg
    13621 ccccttctgc gtttgtgtgt tgggtgggcg ggatcgaatc ctaaggcggc ggaaataatt
    13681 ccttccgccg ctctgttttt cttttccggg tggagccgct gaggctcgtc ggaaggtcct
    13741 gccgtccgca tgggcgtacg gaggaagctg aagaggccac gatggcacag acgttcacgg
    13801 gtcgtaagcg ggtccgcaag ttctttggca aaatcgagga agtcgccgag atgccgaacc
    13861 ttatcgaggt tcagaaggca tcctatgacc agtttctctt ggtcaaagag ccgcatggcg
    13921 ggcgtcccga tgagggtttg caagccgtgt tcaggtcggt gttcccgatc tccgatttct
    13981 ccaatacggc ccagcttgaa ttcgtccgct atgagttcga ggcgccgaaa tacgatgtcg
    14041 acgagtgccg gcagcgcggc atgacatatg cggcgcctct caaggtgacg ctgcgcctta
    14101 tcgtatttga tatcgacgaa gagaccggtg ctcggtcggt caaggacatc aaggaacagg
    14161 atgtctacat gggcgacatt ccgctcttga ccaacaacgg taccttcatc gtcaacggca
    14221 c
//
LOCUS       DATILV010000750         6110 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2482790, whole genome shotgun sequence.
ACCESSION   DATILV010000750 DATILV010000000
VERSION     DATILV010000750.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6110
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2482790"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..313)
                     /locus_tag="VLJ17_17970"
     CDS             complement(<1..313)
                     /locus_tag="VLJ17_17970"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HSV24908.1"
                     /translation="MRNWSTTMGVAGALGLLIVVPVQAAEITVLAGMGVISGVSDLAP
                     AYEKLTGHTVTVRFEQAAAMNQKINSGAQADVAALQPEQVDNFIQQGKMVAGTKTNFA
                     AA"
     gene            complement(402..1061)
                     /locus_tag="VLJ17_17975"
     CDS             complement(402..1061)
                     /locus_tag="VLJ17_17975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HSV24909.1"
                     /translation="MAANMVGKLVIAGVIGAGVGAAVMAAAAPEFNTRGNRFKPFAYA
                     ELTPEQRAFADKEIAGGRKPETGPFNIYLRSPEMAELSRPLSDYLRFKAPMARKLKEI
                     ATMLTSRYWGGQYVWYSHRQQALDAGLSPAFIAAMAAGERPTNMSADEATMYDFVTQL
                     LTTRQVSDANFKAMAALVGERGIVETVVLMGHFTGLTMLFVVDRYPVPAGAPDEVNKP
                     M"
     gene            complement(1501..5028)
                     /locus_tag="VLJ17_17980"
     CDS             complement(1501..5028)
                     /locus_tag="VLJ17_17980"
                     /inference="COORDINATES: protein motif:HMM:NF024904.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSV24910.1"
                     /translation="MRIAKVHLRAYGHFSGHSLDFGTEPGLHLIYGNNEAGKSTMLRA
                     LSSVLFGYPHEVVDGFKHDAKDIGIGIDLLASDGRRLSFVRKRRGKHALSAADGSALD
                     EGMVESFLGGVSREVFEKVFALNHHRLHEHAKALLAEGGALGFSLAEAGSGIAGLKAV
                     LDKLKAERGDLFLAAGTRPKLNQAIAEFTRLRKDARQRTVSPADYRSREKRIQEVDAA
                     LQEMRGRRKAIDSYIVRLQRIGKNLPLRAEHHALTQRIEALDDVPILPPEFAQGRVKH
                     QTDLDAAREDINVASAAVEDLERRIAAIAIDEIILARSAEIEKLAQKRPVIEGCETDI
                     PKREAERVQLYATVVNLMSKAELGGDPTNLVGILPSTLKRKAILTLADDGKKLLAKSA
                     TAQENVEAAARALNKTRDRAAQTPKPRPVGDLSRALTAADQLGDITAELAKRTRALER
                     KTKALTETIIGLGLGTDRVSVLRQLAVPPQRAVTRYAELLVAVGREMKVAADTFERLN
                     ADIASVERRITALKMAGDVATEDDLAAARYARDQGWALVRRLYVDRQSGLEELTRRFA
                     PDGRIAETYERHVREADRSADVMRARIKESTELSVLKSQKNDLEAKSADAKTATNALS
                     AQRDAILSEWRSLWPAGFITVQLPAEMTEWLTRRACALAEADALEAERDAISERADKE
                     HEVRQALVDAMAPFVIEPYDSELESLRERARDVLRDIANANTLHEKADEAIRGQSARR
                     DAADEAADKLNSLIDDWGAAWRGALAAVGLPPDLTIEAACAILEVMSEIDIAKSKIEE
                     STRRIEAMRHDRNAFHNAVAAVASALPGAPTGDAVEICRRLEHRLRAARNEEAELKNL
                     KDQLKPQLGARDRANDKLRRSSAALDILCARAGCARADELSEIERKSTEKQSAIAARG
                     KIETRVREDGDGRDFVALFGECEDVLADQIPADILGLETDRDDTDSHIDKLMSERAAL
                     QAEFENLLGQNQAADLTQEAATVEAEIADTVEAYVDLTVQETLLRAAIDIYRDRNQGP
                     VLVRARSLFTDLTDGAYTGLRADINEKGETILIAEEALRGSLEVDALSDGTVDALYLA
                     LRLAVVQEHNATREPLPFVADDLLLNLDNSRAQAALRTLAAIAASSQVLLFTHHAHMV
                     NLARIAVPPPILVEHNLSLAVSEARAAEG"
     gene            complement(5028..>6110)
                     /locus_tag="VLJ17_17985"
     CDS             complement(5028..>6110)
                     /locus_tag="VLJ17_17985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24911.1"
                     /translation="ECPNMQIAVFLRNQLRRLEQKGIRAVIIKGNHDAGNRITSALAL
                     PVNTRILGEQKPETIRFDDLPVRVAVHGQSFKPGPIAENLAASYPASLRGYYNIGLLH
                     TSLAGTTDHDAYAPCTLEELTSHGYDYWALGHIHQRAVLARDPFVIFPGNLQGRHAKE
                     TGPKGCFLVEVDDAGRTTSADFVPLDVVRWHQAEVDLKGRTNEAEMVDGIRAALTQAH
                     RDSAGRPGAVRVVLTGRTSLFRHVERTPHRLRQTTLELADEIAGNDIWIEKIINSTIV
                     PGERNDAIPNDETHDLVSIMQEIAGNAELIGPLLARELEPLRTKLPGELKELSCFKLL
                     TNPELCREALDRLEPRLAARLAGEEV"
BASE COUNT         1100 a         1916 c         1815 g         1279 t
ORIGIN      
        1 ccgccgcggc aaagttggtc tttgtacccg ccaccatctt gccctgctgg atgaagttgt
       61 cgacttgctc cggctgcagc gccgcaacat cggcctgtgc accggaattg atcttctggt
      121 tcatggcggc agcctgctcg aacctgacgg tgaccgtgtg accggtcaac ttttcgtagg
      181 cgggcgcgag atcacttaca ccagatatca cgcccatgcc ggccaatacg gtgatttcgg
      241 ccgcctgcac cggcaccacg atcagcaacc ccaaagcgcc cgcaacgccc atggtggtgg
      301 accaattcct catgacatcc tccaatcgtt gttcttgcga cttcgtagcc cgaattgagc
      361 gcagcgaaat ccaagctacg tctccaacct ccccctattc ctcacatcgg cttgttgact
      421 tcgtccggcg cgcctgccgg cacggggtag cggtcgacca cgaacagcat ggttaggcca
      481 gtgaaatgtc ccataaggac gacggtctcg acgataccgc gttcgccgac cagtgccgcc
      541 atggctttga agttggcgtc gctgacttgt cgggtggtca gaagctgggt gacgaagtca
      601 tacatcgtcg cctcgtccgc cgacatgttg gtgggccgct cgccggcagc catggcggcg
      661 atgaaagccg ggctcagacc agcatccagc gcctgttggc ggtgcgaata ccacacatat
      721 tgcccgcccc agtagcgcga cgtcagcatg gtggcgattt ccttgagctt gcgcgccatc
      781 ggcgccttga agcgcaagta gtcgctcagc ggtcgcgaaa gttccgccat ttccgggctg
      841 cgcaaataga tgttgaaggg accggtctca ggtttgcgcc cgccggcgat ctctttgtcg
      901 gcaaacgccc gctgttcggg agtaagttca gcgtaggcga acggcttgaa gcggttgccg
      961 cgggtattga attccggtgc cgctgcggcc atcacggcgg cgccgacgcc cgcaccgata
     1021 acgccggcaa tcaccagctt tcccaccata ttggcggcca tggtacttcc tcccgatttg
     1081 ttcctgaaag cctattcgaa gccgaccgat cccgccagag cataatcggg caggattgtg
     1141 gggagcgatc agatcacctc tccaccgtca tgcccacgca gaaacacccc gccgcgtcac
     1201 gctgcaggga cccggtcttc gcgggcatcc acgtctttct cgcggcattt caacaaggcg
     1261 tggatagccg ggacaagccc tgcgacaagc ccggccatgc ctccagagaa atggatcaaa
     1321 atggcctgag ccgcttcaga gcaggtttca gtgacatgga accggtttgc acttgccaat
     1381 tctcggcgtc atcgccgcga aagcgggaat cagtactccg cagcatcgct gacgttaccg
     1441 ggtcgcccgc ctccgcgggc gatgacacgg ctgtgtgatt ccatcagaac gaaacgcgcc
     1501 ctaaccctcg gccgcccttg cctcgctgac agcgagtgaa aggttgtgct ccaccaggat
     1561 cggaggcggc accgcgatcc gggcaagatt caccatgtga gcgtggtggg taaacagcag
     1621 cacctggctc gatgccgcaa tcgccgccag cgttcgcaac gccgcctggg cacggctatt
     1681 gtcaaggttg agcagcagat cgtcggccac aaaaggaagc ggctcacgcg tcgcattgtg
     1741 ttcctgcacg accgcaagac gcagcgccaa gtacaaagca tccaccgttc cgtcgctgag
     1801 cgcgtcaact tcgaggctgc cgcgaagcgc ttcttccgcg ataaggatcg tttcgccctt
     1861 ttcgttgatg tcggcacgca agcccgtata tgccccatca gtcaaatccg tgaataggct
     1921 cctggcgcgc accaggaccg ggccctggtt gcgatcgcga tagatatcga tcgccgcgcg
     1981 cagaagtgtt tcctggaccg taagatcgac ataggcttcg acggtatcgg cgatttccgc
     2041 ttcgacagtc gcggcctcct gcgtgagatc ggcggcctga ttttgtccga gcaggttttc
     2101 gaattcggct tgcagcgctg cccgctccga catcagcttg tcgatatgag agtcggtgtc
     2161 atcgcgatcg gtttccagac cgagaatgtc ggcgggaatt tggtctgcca gaacatcctc
     2221 gcattctcca aacaaggcca caaagtcgcg tccgtcgcca tcttcccgca cgcgggtctc
     2281 gatcttcccg cgggccgcaa tagcactttg tttttccgtc gacttacgtt cgatttcgga
     2341 caattcatcg gcacgcgcgc agcccgcccg cgcgcacaga atatcgaggg ccgcgctgct
     2401 gcggcgaagc ttatcgttgg cgcgatcgcg ggcgcccagc tgcggcttca attggtcctt
     2461 gaggttcttg agttccgctt cttcgttgcg cgcggctcga agacgatgct ccagccgtcg
     2521 gcatatttcc accgcatctc ctgttggtgc cccgggcaag gcagatgcca cggcagcaac
     2581 agcattatgg aatgcgttcc gatcgtgcct catcgcctcg atccgacggg tcgactcttc
     2641 gatcttcgat tttgcaatgt cgatttcact catgacctcg aggatggcgc aggctgcctc
     2701 gatggtgaga tcgggcggca aaccgaccgc cgcgagtgct ccgcgccaag cagctcccca
     2761 gtcgtcgatg agcgagttga gcttatccgc cgcctcgtcc gccgcatccc tgcgggccga
     2821 ttgcccgcgg atggcctcgt cagccttctc gtgcaaggta ttcgcgttgg cgatatcgcg
     2881 gaggacatcg cgtgcccgct ctcgcaagga ttccaactcg ctatcatatg gctcgatgac
     2941 aaacggcgcc atcgcgtcga ccagggcttg acggacctcg tgctccttgt cggctcgctc
     3001 cgagatcgca tcgcgctccg cttcaagggc atcggcctcc gcgagggcgc aggcgcgtcg
     3061 cgtgagccac tccgtcattt cggcgggcaa ctgcacggtg atgaaacccg cgggccaaag
     3121 ggaccgccat tccgacagga ttgcgtcgcg ttgggcggag agcgcgttcg tagccgtttt
     3181 tgcgtcggcg cttttcgctt ccaggtcgtt cttctgactt ttcagaaccg acagctcggt
     3241 cgactccttg atgcgggcgc gcataacgtc ggcggaccga tcagcttcgc gaacgtgccg
     3301 ttcataggtc tcggcaatcc gaccgtcggg cgcgaagcgg cgtgtgagtt cctccaaacc
     3361 ggattgccga tcgacgtata gcctacgtac gagcgcccaa ccttggtcgc gcgcgtagcg
     3421 agcagccgcc agatcgtcct cagtggcaac gtcgccggcc attttcagcg ccgtaattct
     3481 ccgctcgacg cttgcgatat cggcattgag tcgctcgaac gtgtcggcgg cgaccttcat
     3541 ctcccggccc accgctacca gcaattcggc gtaacgcgtc acggctcttt ggggcggaac
     3601 tgcaagttgc cgcagcacgg atacgcggtc tgtccccaga cctaggccga tgattgtctc
     3661 agttagcgcc ttcgtctttc gctcaagtgc gcgggttcgt ttggcgagct cggcggtaat
     3721 atcgccgagc tggtcggcgg ccgtcagagc ccgtgaaaga tcgccaacgg gacggggctt
     3781 gggagtttgc gcagcgcgat cgcgtgtctt gttcagggcg cgggcagcag cttccacatt
     3841 ttcctgagcc gttgctgatt tagccaagag ctttttgccg tcatctgcaa gcgtcaagat
     3901 tgctttgcgc ttaagcgttg agggaagtat gcccaccaga tttgtagggt cgccaccgag
     3961 ttcggccttg gacatcagat ttacgaccgt ggcatacagc tgcactcgct ctgcttcccg
     4021 cttcggaata tcggtttcgc aaccctcaat gacgggtcgc ttttgcgcca gtttctcgat
     4081 ctccgcgctc cgcgccaaaa taatttcatc aatcgcgatt gccgcaatgc gacgctccaa
     4141 atcctcgacg gcggcggagg ctacattgat atcctcgcgg gcggcatcga gatcggtctg
     4201 gtgcttgacg cgcccctgag caaattcggg cggcagaatc ggcacgtcat cgagcgcctc
     4261 gatccgctgc gtcagtgcgt ggtgctctgc gcgcaacggc agattttttc cgatgcgctg
     4321 cagccggacg atgtatgagt cgatggcctt gcgccggccg cgcatctcct ggagcgccgc
     4381 atcgacctcc tggatgcgtt tctcgcgact gcggtagtcg gcgggcgaga cggtgcgctg
     4441 cctcgcatcc ttgcgcaatc tagtgaactc ggcgatggcc tgattcagct tcggtctggt
     4501 gcctgcggcg agaaacaagt cgccgcgttc cgccttgagc ttgtcgagca cggccttcag
     4561 gcccgcaatg ccggatcctg cctccgcaag gctaaagccg agcgctccgc cttcggcgag
     4621 caaggctttg gcgtgttcgt gcaaccggtg gtgattgagc gcgaacacct tttcgaacac
     4681 ctcacgcgac acgccaccga gaaagctttc gaccatgcct tcatctagtg ccgatccgtc
     4741 ggccgcggag agggcgtgct taccgcggcg tttgcgcacg aacgacaacc ggcggccgtc
     4801 actggccaga agatcgatgc cgatcccgat atccttggca tcgtgtttga aaccatcgac
     4861 gacttcgtgg gggtagccga acagtacgct ggagagagca cgcaacatcg tgctttttcc
     4921 cgcttcgtta ttgccataaa taaggtgaag gccgggttcg gtgccaaagt cgagtgaatg
     4981 gccgctaaag tggccatagg cacgcaggtg aaccttagcg atgcgcatca cacctcctcg
     5041 ccggcaagac gggcggccag ccgcggttcg agccgatcca gggcttcccg acacagctcc
     5101 ggattggtga gcagcttgaa gcaggaaagc tccttcaatt cccccggaag cttggttcgc
     5161 aacggttcaa gctcccttgc cagcagcggc ccgatcagct ccgcattgcc ggcgatttcc
     5221 tgcatgatgc tgacgagatc gtgcgtttca tcgtttggga tcgcgtcatt ccgctcgccg
     5281 ggcacaatgg tgctgttgat gatcttctcg atccatatgt cattgccggc aatttcgtcg
     5341 gcgagctcaa gcgtcgtctg gcgcagacgg tgcggcgtgc gctcgacgtg ccggaaaagc
     5401 gatgtgcggc cggtcagcac gacgcggacg gcgccggggc gcccggcact gtcccgatgc
     5461 gcctgggtca gagccgcccg tatgccatcg accatttcgg cctcgttggt ccgccccttc
     5521 aggtcgacct ccgcctgatg ccagcgcacc acgtcgaggg gaacgaagtc cgccgacgtc
     5581 gtgcggccgg cgtcgtcaac ctcaaccaaa aagcaccctt tggggccggt ctccttggca
     5641 tgccggccct ggaggtttcc gggaaagatc acgaacggat cgcgggcaag aacggcacgc
     5701 tggtggatgt ggccaagcgc ccagtagtca tacccgtggc tcgtcagctc ttccaaggtg
     5761 caaggcgcgt aggcgtcgtg gtccgtggtt ccggcgagcg aggtatgcag aagcccaatg
     5821 ttgtaatatc cgcgcagcga tgccggatac gacgcagcga gattttcggc gatcggtcca
     5881 ggtttgaaac tctggccgtg gaccgcaacg cgcaccggta gatcgtcgaa cctaattgtt
     5941 tccggctttt gttcaccgag tatgcgggtg ttcactggca gcgcaagtgc gctggtgatc
     6001 ctgttgccgg catcatgatt gcctttgatg atgacggcgc gaattccctt ctgctccaat
     6061 cgcctcagtt ggttgcgcag gaacacagca atttgcatat tcggacattc
//
LOCUS       DATILV010000751         1607 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1974304, whole genome shotgun sequence.
ACCESSION   DATILV010000751 DATILV010000000
VERSION     DATILV010000751.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1607
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1974304"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..845)
                     /gene="cysS"
                     /locus_tag="VLJ17_17990"
     CDS             complement(<1..845)
                     /gene="cysS"
                     /locus_tag="VLJ17_17990"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HSV24912.1"
                     /translation="MELKLYDTLTREKRVFAPLDPARVRMYVCGPTVYDFAHIGNARP
                     VIVFDVLFRLLRHIYGERHVTYVRNITDVDDKINARAAERGIAIGQLTKETYEIFHRD
                     VQALACLDPTHEPRATEFIEPMKELIERLLKSGHAYVAEDNVLFHVPSMKDYGRLSNR
                     SLDEMIAGARVEVAPYKKDPQDFVLWKPSKPGEPAWPSPGGIKTPGRPGWHIECSAMS
                     WKHLGETFDIHGGGIDLVFPHHENEIAQSRCAFHTPLMANFWMHNGFLQVEGEKMSKS
                     LGNFVT"
     gene            1147..1455
                     /locus_tag="VLJ17_17995"
     CDS             1147..1455
                     /locus_tag="VLJ17_17995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24913.1"
                     /translation="MRTPLVGLAAALCLGFVTSASAERRMFFVANDSDGYGIDRCLAS
                     GAKCGTAVANAYCKRQSFAEAATFHKADQSDITSTIPAESADSCRSSSCDVVAIVCTR
                     "
BASE COUNT          354 a          472 c          456 g          325 t
ORIGIN      
        1 gtcacgaagt tgccgaggct cttgctcatc ttttcgcctt cgacctgaag aaatccattg
       61 tgcatccaga aattcgccat cagtggcgta tgaaaggcgc atcgcgactg cgcgatctcg
      121 ttttcgtggt gcggaaacac aaggtcaatt ccgccaccgt ggatgtcgaa agtctctccg
      181 aggtgcttcc acgacatagc agagcactcg atgtgccaac ccggccgccc tggtgtcttg
      241 attccgccgg gtgatggcca tgccggttca ccgggtttcg aaggcttcca gagaacgaaa
      301 tcctgcgggt cctttttgta aggtgcgacc tcgacgcgcg cgccggcaat catctcgtcg
      361 agcgaacgat tggagagtcg cccatagtcc ttcatcgacg gaacatgaaa gaggacattg
      421 tcctccgcca cataagcatg ccccgacttg aggagccgct cgatcagctc tttcatcggc
      481 tcgatgaatt ccgtggcacg tggctcatgt gtgggatcga gacaggccag cgcctgtaca
      541 tccctatgga aaatctcgta ggtctctttc gtcagctgac caatggcaat gccccgctcg
      601 gcggcacgcg cattgatctt gtcatcgacg tccgtgatgt ttcgcacgta agtgacgtgt
      661 ctttcgccat agatatggcg cagcagacgg aaaagaacgt caaagacgat gacaggccgc
      721 gcattgccta tatgggcaaa gtcgtagacc gttgggccgc acacatacat gcgcacgcga
      781 gcaggatcga gcggagcgaa tacccgcttc tcgcgcgtca gcgtatcgta gagcttaagc
      841 tccatagcaa tgacatccct cggccccgct ggccgggcgt cgtgctatct caatcttgag
      901 aaaagacggc cgtgaccagc gcggacagcg ctagcgaata atctccgggc aaatgccgca
      961 gatatggtta aggccgttca tggcggcaca atgatttgtc ggacgcagcc cgtcaaggtg
     1021 gtggcggaat tcgtgtgaaa cacgggaaaa aatgaataac cgccggggag cttgcagggt
     1081 taagcaccgc ttaacgattt gcccgcattg tcgaaacgag cttccccagc acgtcgggcg
     1141 caccttatgc ggacaccttt ggtcggcctc gccgccgcgc tttgcctcgg tttcgtcacg
     1201 tccgcgagtg ccgagcggcg aatgtttttc gtcgccaatg attcagacgg ctacggcata
     1261 gaccgttgcc ttgcctccgg cgccaaatgc ggaacggcgg tcgccaatgc ctattgcaaa
     1321 agacaatcct ttgcggaagc ggcgaccttt cacaaggcgg accaaagcga cataacgagc
     1381 accattcccg ccgaaagtgc ggacagctgc cgcagcagca gctgcgacgt cgtcgccatc
     1441 gtgtgcacgc gctgaggtaa tcgagtctac gcccggcgcc catccaccga gtaggaacca
     1501 gcgccggcga ccataagcgc gatgaaccca ccgacaatcg ccatgttttt ccaaaagtgc
     1561 gacatctgat tggggtcgcc aaaattgcga tgagcgatga gcgccgc
//
LOCUS       DATILV010000752         7660 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2483089, whole genome shotgun sequence.
ACCESSION   DATILV010000752 DATILV010000000
VERSION     DATILV010000752.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7660
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2483089"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..733
                     /locus_tag="VLJ17_18000"
     CDS             <1..733
                     /locus_tag="VLJ17_18000"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HSV24914.1"
                     /translation="LVGADGAHSTARKAIGVEFEGFTYPERCMIIGTPYDFTDDGYAY
                     RNYIADPQEWYNLFKISWQGPPGVYRLVAPVRLDERLDGDLALATAHRKLQRFNPRPQ
                     GYEIVICNSYTVAQRVAATFRKGRVLLAGDSAHLNSPIGAMGMNSGIHDAVNLAEKLI
                     CVLRGEESDASLDRYARQRRHVATAHVQSATIANKENMEQRDPIKRQRYRDEMRRRAE
                     DPTLAKAFLMRTALIDSLRDAAQIA"
     gene            899..1309
                     /locus_tag="VLJ17_18005"
     CDS             899..1309
                     /locus_tag="VLJ17_18005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BA14K family protein"
                     /protein_id="HSV24915.1"
                     /translation="MFKRTLILSVVALSVTAASNVTSAAPFADPLAIKNAVGTDVETV
                     WWRGGHGWGGFGWGVGAGLLGGAIIGGALAAPYYYGAPYYYGAPYYYPPAAYGPAPAY
                     RGGDSAAYCAGRYRSYDPATGTFLGHDGVRHPCP"
     gene            1466..2191
                     /locus_tag="VLJ17_18010"
     CDS             1466..2191
                     /locus_tag="VLJ17_18010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007601607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HSV24916.1"
                     /translation="MPGAKDISPPVRDADKRAMLQNHYLFSKLSAKHIDRLAACIVGK
                     SVPRATNIFAKGDPGSSLFAIYQGAVKIAAPSVDGHDAVFNLIGKGDIFGEIALLDGR
                     PRTADAVAITDCELFVIERRDFLPLVREEPEIALKLIEILCARLRKTTEQAENLMFLH
                     LPGRLAKALLRLSDGDGHACERKVVVTQKDLGNIIGMSRESTNRQLRIWEAHKWVRLE
                     RGGIVILSTKALERMAESDAEGA"
     gene            2468..3067
                     /locus_tag="VLJ17_18015"
     CDS             2468..3067
                     /locus_tag="VLJ17_18015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011442428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSV24917.1"
                     /translation="MRDSWVATSNRKQNRRAADVVLIKRIASGDKAAMHMLFSNHRVP
                     VYRFVLRRLRDKALAEDVTSEVFLEVWRQAGRFEGRSAVLTWILAIARHKAFSVRPRL
                     DEPPFDECRADMNLESVDAPDTLLHIQDRDTLLRRCLTKLSAQHREIIDLVYYQEQSV
                     EAVATILGIPRNTAKTRMFYARQRLADELKKFGDDYASN"
     gene            complement(3080..4606)
                     /locus_tag="VLJ17_18020"
     CDS             complement(3080..4606)
                     /locus_tag="VLJ17_18020"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HSV24918.1"
                     /translation="MPLRPNANAPGTKASNTGSGPATPLVDQIVIAMQRDIDTRKLPP
                     GARVPSIRDLARRQLISRHSAVEAYDRLVAAGYLESRPGSGFYVAARGRGTPDTGAGE
                     RRRIYDVAWLIRQALEDGSDMLKVGGPWLPDAWLDCDGIQRVVRALGREPGGHLLHYG
                     HPLGYLPLRQQLQLKLAEIGITTTPDQIVLTCGTSQALELVTRYLLSSGDTAFVDDPG
                     YYNLFGFLRQSGIRLVGVPRNVDGPDIAAMRQLLTQHRPKAFFTQTLMQNPTGTDMSP
                     SVMHRVLQAAEEFDFTIIEDDTYCDIGTNPSARLATLDQLNRVIYVRSFSKTLSGSLR
                     VGFAAASPPIADAITNLKVLSCITTSLFSEKLIHRLLIEGHYRKFLDRLRVRITQARS
                     ASMRLLASVGMAAFCEPAGGNFLWARFPHIEDSEALIADARGNGIMLAPGAVFRPNLE
                     SSPYLRFNVTMCGDPRLESFLRKAGGEGRTARGETRPVSLVTQTASDTPGANGNRHAP
                     "
     gene            4795..5574
                     /locus_tag="VLJ17_18025"
     CDS             4795..5574
                     /locus_tag="VLJ17_18025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006613592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrU family protein"
                     /protein_id="HSV24919.1"
                     /translation="MGARIVTSVYGVISYLTFLVSFVYAIGFVGDVLVPKSIDRGGSA
                     DLTEAVFADLTLLGLFAIQHSVMARPGFKHWWVRIIPAAAERSTYVLLSSLILMLLFW
                     QWRPIPAPVWQLASTAMGPVLTGIFWLGWLTVLLSTFLINHFDLFGLRQAAAKLRGTD
                     MPSTVFKMPLLYKIVRHPIMLGFLFAFWATPNMSAGHLLFAVMTTGYILIALQLEERD
                     LIATFGASYEQYRQRVPMIVPLWPTGRGEPDRASKHLRPSA"
     gene            complement(5587..6576)
                     /locus_tag="VLJ17_18030"
     CDS             complement(5587..6576)
                     /locus_tag="VLJ17_18030"
                     /inference="COORDINATES: protein motif:HMM:NF025330.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kelch repeat-containing protein"
                     /protein_id="HSV24920.1"
                     /translation="MKAGQRAALWACVAVIGAVPMFVHGQTVAPGTAGTGNWTQKAPM
                     ITARTEVSLAQVGGKVHAVGGQINGTSVPHNEEYDIATDKWRVRYPMPRGLDHMGVAV
                     VNGKIITVGGFVASVHKDGQPLVFEYDPATDSWRALAPMKAGRGAVGVAALNGKVYAI
                     GGRTPAGMTIDINEVYDPATNTWTTLAPLPKARDHMAVIAAEGKIHVIGGRFTTPADR
                     TDMHDVYDPATNTWTSGPPLPTARSGLAYTSYMGMAIVLGGEFPQEKRTFVENEGFDA
                     KANTWRKLAPMPQGRHAAGATSDGKTLFVGGGSLLPGGMGGGPLGELMAFNLP"
     gene            complement(6697..7185)
                     /locus_tag="VLJ17_18035"
     CDS             complement(6697..7185)
                     /locus_tag="VLJ17_18035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004108184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24921.1"
                     /translation="MTVEALFGLSILMSFLGYGIVTRLYIWPWLRAAPRDEALVALAA
                     PHMSRFVGLSFLVPGVVSPTLSPAFAVPAAYGDLGAAILAVLTIWSLSAHWSWAIAIA
                     WVFNLWGSLDLLHAFYQGQIGVRIGPGSLGAAYFIPTVVVPALLVTHGLMFWLLMRQK
                     RS"
     gene            complement(7454..>7660)
                     /locus_tag="VLJ17_18040"
     CDS             complement(7454..>7660)
                     /locus_tag="VLJ17_18040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24922.1"
                     /translation="APEKLASPQILRHQGPLHRGRIRTSLPRALPGFLLFACLCVNAL
                     MFLMPGFVSPELPQALPYQPPTAI"
BASE COUNT         1514 a         2325 c         2342 g         1479 t
ORIGIN      
        1 cctggtggga gccgacgggg cgcatagcac cgcacgtaag gcgatcggag tcgaattcga
       61 gggtttcact tatccggaac gctgcatgat catcggcacg ccttatgatt tcaccgatga
      121 tggttacgcc tatcgcaatt acatcgctga tccgcaggag tggtacaatc tcttcaagat
      181 ctcctggcag gggccacctg gggtctaccg cttggttgcg ccggtgcggc tggacgagcg
      241 gctcgacggc gatttggcgc tcgcaaccgc gcaccgcaag ctgcaacggt tcaacccgcg
      301 cccgcaaggc tacgagattg taatctgcaa ttcctacacc gtagcccagc gtgtcgccgc
      361 gaccttccgc aagggccgcg tgctgctcgc aggcgatagc gcccatctca acagtccgat
      421 cggcgccatg ggcatgaaca gcggcatcca cgacgctgtc aacctcgccg agaagctgat
      481 ctgcgtgctg cgtggcgagg aaagcgacgc ctcgctagac cgctatgcgc gtcagcgccg
      541 ccacgtggcg accgcccatg tgcaatccgc caccatcgcc aacaaagaga acatggagca
      601 gcgtgatcct atcaagcgcc agcgctaccg cgacgagatg cgccgccgcg ccgaagaccc
      661 tacacttgcc aaggcgttcc tgatgcggac cgcactgatc gacagcttgc gggatgcggc
      721 gcagattgcg tgagggccga gcgggggaat tgtcgcggca atcgtgcgcg gcgcgcgcgc
      781 cccaagtgct tgaaccacaa gccgaaaggg tcacacactg tgacaaaatt accgtgatac
      841 gcgatctgat ttttcgcgta taatgagtcc acgggcgagg tgtaatggga gagagccaat
      901 gtttaagcga acgctaatcc tctcggtcgt cgcactaagc gtcacggctg cttcaaacgt
      961 cacgtcggct gcgccgtttg ccgatccgct cgcgatcaaa aacgccgtcg ggaccgacgt
     1021 cgagacggta tggtggcgcg gtggccatgg ttggggtggc ttcggctggg gtgtcggagc
     1081 cggactactc ggtggggcca ttatcggcgg cgctctggcc gcgccctact actacggcgc
     1141 accttactac tacggcgccc cttattatta tccgccggcg gcttacggcc cggcgccggc
     1201 ctatagagga ggcgatagtg cagcgtactg tgctggtcgc taccggtcct acgacccggc
     1261 gaccggtacc ttcctcggcc atgacggcgt gcgccatccc tgcccatgac ggataaataa
     1321 ttgaaacacc gagggccggc acctgtggcg gcccttttta attgtccaga acagcgcgac
     1381 gtctgtggtc cctgtcgtat caatttttct cccgagttcc ttgttctcca tttattgcgg
     1441 ctgcatttcg gctatagtct ggcgcatgcc tggcgccaag gacatttcgc cccccgttcg
     1501 cgatgccgac aagcgcgcaa tgctgcaaaa tcactatctt ttcagcaaac tgagcgcgaa
     1561 gcatatcgac cgtctcgccg cctgcatcgt cggaaaatcg gttccgcgcg caaccaacat
     1621 tttcgcaaaa ggtgatcccg gttccagcct gttcgcgatt taccaaggag cggtgaaaat
     1681 agccgcacca tcggtcgacg gccatgatgc ggtgttcaac ctgatcggca agggtgacat
     1741 ctttggggag atcgccctcc tcgacggccg gccacgaacg gcggatgccg tcgcgattac
     1801 ggattgtgaa ctcttcgtca tcgagcgtcg ggatttcttg ccgttggtac gggaggagcc
     1861 ggagattgcg ctcaagctga tcgagatctt gtgcgccagg ctgaggaaga ccacggagca
     1921 ggccgagaat cttatgtttc ttcatctccc cggtcgcctt gccaaggcgc tcttgcgcct
     1981 ctccgatggc gatgggcatg cgtgcgagcg aaaagtcgtc gtcacacaga aggacctcgg
     2041 caatatcatc ggcatgtcgc gagagagcac aaaccgacaa ttacgcattt gggaagcgca
     2101 caaatgggtc cgcctcgaac ggggcggaat tgtcatcttg tcgacgaagg cgctcgaacg
     2161 catggccgaa agcgatgccg agggcgcgta gcgcttcggc cttcacaggc aaaggcgcct
     2221 ggcccgcgct ttttgatttg atttcgccgg cctttagcgc cgcgcccacc ccatgccggc
     2281 cggtggggac agcgcgacat gtcgtagccg tgtctaaacg actttgccga cctttggcgg
     2341 tcacaccacc ccgatttagg cggcaaggtc agttcagaaa ttgtgcggcg aatgtgaggt
     2401 ggatcacatt ggccaagttg gtgaaccgtt acgatccagt agcttcacag cggatggatc
     2461 ggcggccatg cgtgactcat gggtggccac ttcaaatcgg aaacagaatc ggcgtgctgc
     2521 cgacgtggtg ctgataaaac ggatcgcgtc cggcgacaaa gccgcgatgc acatgctgtt
     2581 ttcgaaccat cgcgttccgg tttatcgttt tgtgttacgt cggttgcggg acaaagcgtt
     2641 ggccgaggac gtgaccagcg aggtgttcct tgaggtatgg cggcaagccg gccggttcga
     2701 gggccgctcg gcagttctga cctggatcct tgcgatcgcg cgccacaagg ctttctcggt
     2761 ccgcccgcgc cttgacgaac cgccatttga cgaatgccgg gcagatatga atctggagag
     2821 cgttgatgct ccggacactt tgttgcacat acaggatcgc gacacattgc tgcgaagatg
     2881 cctcaccaag ctctcggcgc agcatcgcga aatcatcgat ctcgtctact accaggaaca
     2941 atccgtcgaa gccgtggcta cgattctcgg gattccccgg aataccgcaa agacgcggat
     3001 gttctatgcg cgtcagcgac tggcagacga attgaagaaa ttcggagacg attacgcctc
     3061 gaattagcgc tccgtgcaat caaggggcgt ggcgattgcc attcgcgcca ggcgtatcgc
     3121 tggccgtttg ggtgacgagc gaaactggcc ttgtctcgcc gcgcgccgtg cgcccctccc
     3181 cgcctgcctt gcgcagaaac gactccagcc gcggatcgcc gcacatggtg acgttgaagc
     3241 gcagatacgg cgagctttcc aggttcggcc tgaacacggc gccgggcgcc agcatgatcc
     3301 cgttcccgcg ggcatcggcg atgagcgcct cggaatcctc gatatgcgga aaacgcgccc
     3361 acaggaagtt gccgccggca ggctcgcaaa acgccgccat gccgacgctc gccaagagac
     3421 gcatgctggc actgcgcgcc tgcgtgatgc gaacccgcag gcgatccaag aatttgcggt
     3481 agtgcccctc gatcagcagc cgatggatga gcttctcgct gaacagcgag gtggtgatgc
     3541 aggacaaaac cttgagattc gtaatcgcgt ccgcaatcgg cggcgaggct gccgcgaagc
     3601 cgacccgcaa gctgccggag agcgttttcg agaagcttcg cacataaatg acgcgattga
     3661 gctggtccag cgtcgccagc cgtgcactcg gattggttcc aatatcgcaa taggtatcgt
     3721 cctcgatgat ggtgaagtcg aattcttctg cggcttggag cacacgatgc atcactgacg
     3781 gactcatgtc ggtcccggtc ggattctgca tcagggtttg ggtgaagaac gccttcggcc
     3841 gatgctgcgt gaggagctgt cgcatcgcgg caatgtccgg gccgtccaca ttgcgcggca
     3901 cgccgaccag ccgaatgccg ctttgacgca gaaaaccgaa caaattgtaa tagccgggat
     3961 cgtcgacaaa tgcagtgtcg ccggaactca gcaggtagcg ggtcaccaac tcgagggctt
     4021 ggctggtgcc gcaagtcagc acgatctggt cgggggtcgt ggtgatgccg atctccgcga
     4081 gcttgagctg caattgctgg cgcagcggaa ggtagcccag gggatgtccg tagtgcagca
     4141 gatgcccgcc gggctcgcgg ccgagggcgc gcacgacacg ctggatgccg tcacaatcaa
     4201 gccacgcgtc gggcagccag ggaccgccga ccttaagcat gtcgctgccg tcttcaagtg
     4261 cctgacggat cagccaggcg acgtcgtaga tgcggcgccg ctcgccggcc cccgtatcag
     4321 gagttcccct tccccgcgcc gccacgtaga acccagaacc aggacgggat tcgagataac
     4381 ccgctgccac caatcgatca taggcctcga ccgcgctgtg gcggctgatg agctggcggc
     4441 gggccagatc gcggatcgag gggacacgag caccgggcgg tagcttgcgc gtgtcgatgt
     4501 cgcgttgcat ggcgatgaca atctgatcga caagcggcgt tgccggccct gacccggtat
     4561 tcgatgcttt cgtgcccggc gcattggcgt tcggcctcaa tggcatggcg atatcccttc
     4621 cgggccgagc tgtcacggcg ttgatccaat ctgaccgtcc ggctcagatg aagctgtatc
     4681 gctagctgac cgatacagtt ctgacgactt cgctccaaac tgtcagaccg acatttgcaa
     4741 gtgtctggta aattcgggcc gcctgtcaag catcacagaa aaagggagca aatcatgggc
     4801 gcccggatcg ttacatccgt ttacggagtc ataagctatc tcacgttctt ggtctcgttt
     4861 gtctatgcga tcggcttcgt cggcgacgtc cttgtaccga agtcgatcga tcgtggaggc
     4921 tcggcagatc tgaccgaagc cgtgttcgcc gaccttacgc ttctgggtct gttcgcaatc
     4981 caacacagcg tgatggcgcg gccaggcttc aagcactggt gggtgcgaat catccccgcc
     5041 gctgccgagc gcagcaccta tgtgctgctc tcgagcctta tcctgatgct gctgttctgg
     5101 cagtggcgac cgatccccgc cccggtctgg cagctggcca gtaccgccat gggacctgtg
     5161 ctgaccggca ttttttggct cggctggctg acagtgctgc tgtcgacctt cctgatcaat
     5221 cacttcgacc tgttcggcct gcgtcaggcc gccgcgaagc ttcgcggcac cgacatgccg
     5281 tcaactgtgt ttaagatgcc gctgctttac aagatcgtac gccacccgat catgctcggg
     5341 ttcctgtttg cattctgggc gaccccgaac atgagcgccg gacacttact gtttgcggtc
     5401 atgaccaccg gttacatcct gatcgcgctc cagcttgagg agcgtgatct gattgccacc
     5461 ttcggggcaa gctacgagca atatcgccag cgcgtgccga tgattgtgcc gctgtggccg
     5521 acgggtcggg gtgagcccga tcgggcctcc aaacacctcc ggccgtctgc ctaaaatgag
     5581 cagcactcac gggaggttga aggccatcaa ttctcccagt gggccgcctc ccatgccgcc
     5641 cggcagaagc gagccaccgc cgacgaaaag cgtcttgccg tcgctggtgg cgccggcagc
     5701 gtggcggccc tgcggcatcg gggcaagctt gcgccacgtg ttggccttgg cgtcaaaacc
     5761 ttcattttcc acaaaggtcc gcttttcctg cgggaattcg ccgccgagca cgatggccat
     5821 gcccatgtag gatgtgtagg cgaggccgct gcgcgcggtc ggcagcggcg gccccgacgt
     5881 ccatgtgttg gtggccggat cgtaaacatc gtgcatgtcg gtgcggtcag cgggagtcgt
     5941 gaagcgaccg ccgatgacgt ggattttgcc ctcggccgca atgaccgcca tatggtcgcg
     6001 ggccttcggc agaggtgcga gcgtcgtcca tgtgttggtt gcaggatcat agacctcgtt
     6061 gatatcaatg gtcatgcccg ccggcgtacg cccgccgatg gcgtagactt tgccgttaag
     6121 cgccgcaacg cctacggcgc cgcggccggc cttcatcggg gcgagcgcgc gccaggaatc
     6181 ggtcgccgga tcatattcga acaccagcgg ctggccgtcc ttgtgtacag atgcgacgaa
     6241 gccgccgacc gttatgattt tgccgttcac caccgcgacg cccatgtggt cgagcccacg
     6301 cggcatcgga tagcgcaccc gccatttgtc ggtcgcaatg tcgtattcct cgttatgcgg
     6361 aaccgaggtg ccgttgatct ggccgcccac ggcatggacc ttgccgccca cttgcgcgag
     6421 cgagacctcg gtgcgagccg ttatcatcgg cgccttttgg gtccagttgc cagtccccgc
     6481 ggtgccgggc gccacggtct gaccatgcac gaacatcggg acggcgccga ttacggcgac
     6541 gcaagcccaa agggcagcac gctggcctgc tttcatcacg aattcctccc gtggttcgtc
     6601 gcagtgtagc gcctgaccgt cggcgccgcc acatccgtcg gaacgtcagg gcttggcgag
     6661 cggcgctgaa tagaggaacg ctacggtcgt tcggacttac gatcgctttt gccgcatgag
     6721 tagccaaaac atcaatccgt gcgtaacaag gagcgctggc acgaccaccg tcggaatgaa
     6781 atacgccgct cccagcgatc ccggtccaat gcggactccg atctggcctt ggtagaaggc
     6841 gtgcaagaga tccaggctgc cccaaagatt gaagacccaa gctatcgcga tcgcccagga
     6901 ccaatgggcc gacagcgacc aaatcgtgag gaccgcaagg atggccgctc ccaaatcgcc
     6961 ataggctgcc ggaacggcaa atgccggcga gagagtcggg gaaaccacac ctggaacgag
     7021 aaagctcagc cccacgaagc gagacatgtg cggagccgcc aatgcgacaa gggcttcgtc
     7081 tctgggggcg gctctaagcc acggccaaat ataaagtctt gtgacgatac cgtagccgag
     7141 aaaactcatc aggatgctaa gcccaaacaa cgcctcaact gtcattttcg tctctcctcg
     7201 cgcatgtcag caccaccaat gtgcccgcta gagcaaattt tgttctgatg gaatcaaaca
     7261 accatgtctt cgccggcacg ttgagcacgg cgagataaga ggaaacgcag gaaaaccggg
     7321 atcgacgtaa tccttgatcg acgcgatgtt cgcgtaggtc taaaagcccg acgacgttga
     7381 acagccacgg catcgggacc cacgctctcg tggcgaatgc acgtcagcgc aacgagcgaa
     7441 agagtggccg cagtcaaatc gccgtaggcg gttggtacgg caaggcttgc ggcagctcgg
     7501 gcgagacaaa cccgggcatc aggaacatca gagcgttgac gcacagacac gcgaacagga
     7561 gaaacccggg aagcgcgcgc gggaggctgg tccggatccg gcctcgatgg agcggacctt
     7621 gatggcgcaa tatctggggc gatgccaatt tctccggtgc
//
LOCUS       DATILV010000753         3104 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3252865, whole genome shotgun sequence.
ACCESSION   DATILV010000753 DATILV010000000
VERSION     DATILV010000753.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3104
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3252865"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            629..1003
                     /locus_tag="VLJ17_18045"
                     /pseudo
     CDS             629..1003
                     /locus_tag="VLJ17_18045"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase N-terminal domain-containing
                     protein"
     gene            1075..1257
                     /locus_tag="VLJ17_18050"
     CDS             1075..1257
                     /locus_tag="VLJ17_18050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24923.1"
                     /translation="MFFLCRQVDAERPRPGFEIMDAGYFARDRIPDLSRGRVIADDIE
                     AAFAFHNSPARTAVVD"
     gene            complement(1299..1607)
                     /locus_tag="VLJ17_18055"
                     /pseudo
     CDS             complement(1299..1607)
                     /locus_tag="VLJ17_18055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013533399.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
     gene            complement(1803..2276)
                     /locus_tag="VLJ17_18060"
     CDS             complement(1803..2276)
                     /locus_tag="VLJ17_18060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24924.1"
                     /translation="MATNSDGALASGVAAHVHGVARRSPFKYVPGFLYILVLYIAGKF
                     IFSDPRATLVQWGEYPLSWVEVLMVGAAMMAMAEQLKVSHPGIDNTIEAILMAAVAGV
                     QVLLFALGAAGVRSLAIFNNTEFFMLTLISMTQAVVAILINARTLRRSIGVGDNG"
     gene            2610..2759
                     /locus_tag="VLJ17_18065"
     CDS             2610..2759
                     /locus_tag="VLJ17_18065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24925.1"
                     /translation="MAWSHITADSNKIVVVEQKTVRRLLVRFPVTHSVGGNKARSRLD
                     PHNNV"
     gene            complement(2949..>3104)
                     /locus_tag="VLJ17_18070"
     CDS             complement(2949..>3104)
                     /locus_tag="VLJ17_18070"
                     /inference="COORDINATES: protein motif:HMM:NF023665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3606 domain-containing protein"
                     /protein_id="HSV24926.1"
                     /translation="KGPQDRARINLNEPYELRYWMKEFAVSEAELRELVEEHGTSVVR
                     VRKILRN"
BASE COUNT          627 a          916 c          892 g          669 t
ORIGIN      
        1 atgcctcacc ttggctcacg aaggcgtccc tggccgggtt tggtcgtagc agcgcggccc
       61 caaagacttc atcgatcgcg acgtcgaaga ttagtccgat ggcagtcatc gccatcactg
      121 tcacgggttc gctggccgcc acgaagaaca ctcggcgttg cgcccgggcc tgctcctcaa
      181 tgaggtttgt cgcgcctcct tttcaggctg cttctctgct gcaggcttct cttcgtgagc
      241 tgagacctcg gctttggtca tacgaccgtg gctgcgcaaa accttgctgc cgcccagacg
      301 ataccggtta caccattgat aaatgctctt gcgtgaaacc ccgaactccc gggccagaac
      361 gctgacgttc tcccccggcc tccatccggc gcaacgcttc aagcttgaac tcgcggctaa
      421 atcggcttgg ttcgtcggtg ctcaaccagt cctcccccag acaggagaac tgtcaccatt
      481 ttccctgtct caggataggg gttcactacg ccggaacgga cctacacgac tgacgtccgc
      541 aatggctcat tcctgacgca tcgactgcaa tcgctcgtca tcggtcttgt ctcgtgtctt
      601 ccaccggtac gataggcagg agcctgccat ggaagatcaa tggctcgctt gggcgaagcg
      661 gctgcaggcg atcgcgtcga ccggtcttca cttctgcgaa gatgattttg atcggcaacg
      721 ttatcgcgac gtagctgcca ttgcgcagtc gatgctggct tcgctcggaa atgttccgat
      781 cgagcgaatc gaggggctgc tttccgattt cgccaaaggc tacgccacgc ccaagatcga
      841 cgtacgcggt gctgtcattg aagatgggaa ggtgttgctg gtccgcgaaa agagcgatgg
      901 tctgtggacg ctgcccggag gctttgcgga tgtcggacta tccgccaccg agaacgtcac
      961 gaaggaagtc tgggaagagg cgggtattcg agtttcagtg accggcctgt acagcgtgag
     1021 acataaggca aagcagcctt acgaacccga cacgacatca gagattttta caagatgttc
     1081 ttcttgtgcc ggcaggtcga cgcagaacga ccgcggcccg gcttcgaaat catggacgca
     1141 gggtattttg cgcgcgatcg cataccggac ctgtccagag ggcgggtcat tgctgatgat
     1201 atcgaggccg cctttgcgtt ccacaacagc ccggcacgta ctgcggtcgt cgactagtgc
     1261 tggcaagaag gcggcagaca gcggcggggg tatcgcattc aatccagcgt ccagccgatg
     1321 gcgcgccgca ggaacgcgta gccgagcgat atgaacgccg ccatgtcgtc atggtccttg
     1381 ccgtaactgt gccctccggt cgcaagctcg tagaaatgtg cttcgtagtt cattgcctgc
     1441 agcttggcag ccatcttgcg ggcgtggccc ggatgcactc ggtcatcgcg gcggctggtc
     1501 gcgatcagga tcggtggata ggtatgcccc ggcgccgcga cgtgatacgc ggaaatctcc
     1561 gcgagaaatc tccaatcctc cggcttatcg ggatcgccgt attcgtcggt aatcgtggtt
     1621 cccgaccttg cgcgtcatat ctttggtgat cgataatcgt gaagggtcga ggcattcgca
     1681 cgatctttac cgtggttcgg cgtcgagtcg tgatgtcttg gaggcagccc tagcctcaca
     1741 ccctactcgc ccggcatttt tcagagcagc gcaggcacga attggcgtcg gttcggcact
     1801 aattagccgt tgtcgccgac gccgatcgag cgccgcagcg ttctggcgtt aatcaagatc
     1861 gcaacgacag cctgtgtcat gctgatcaaa gtcagcatga aaaactcagt gttgttgaag
     1921 atggcgaggg atctgacgcc ggctgcccca agagcgaaaa gcagcacctg aacgcctgcg
     1981 actgctgcca tcaagatggc ctcgatcgta ttgtcgatgc caggatgcga cactttcagc
     2041 tgctcggcca tggccatcat agcggctccg accatgagga cctcgaccca agagaggggg
     2101 tactcacccc actggaccaa agtcgccctc ggatcggaga agatgaactt cccggctatg
     2161 tagagaacca gaatatacaa gaagccgggc acgtatttga acgggctcct tctcgccaca
     2221 ccatggacgt gcgcagccac accgcttgcg agcgcaccat cagagtttgt tgccatttga
     2281 ctttcctgct gcttgaaacc gcgcgactaa aaatgacgcc gcctgcgcgt agcccgcggg
     2341 gtcactgtct acgtatgccg ccgcggcagc gatacaatgg gggcagggag gtgacccaaa
     2401 tcgcaggtcc ggcgcttcgg attgagacgg ctcggatcga ggccgccaag cggcgctctt
     2461 tggtcatgcg cgatctcttc gctcggtacg cagacgcgtt gctcgtgcaa gttcttcaat
     2521 ccgtagtttg caatgcgttt cacccgatgc gacagcggct tgacgatggc tgttaacgac
     2581 gccagaccgc attgccagca aggagcttca tggcgtggtc acacattacg gccgacagca
     2641 acaagatcgt cgtggtggaa cagaagacgg tgcggcggtt gctggttcgc ttccccgtga
     2701 ctcacagcgt tggcggcaac aaagcgcgct cacgtcttga tcctcacaac aatgtatgac
     2761 aagccgttcg ccgtcgatgg ctttatttat acgatccgtc ccgtttacgg cgcgccgaaa
     2821 aatctctcct acggcacgga ctgtgccgtt cgttcacgga cgcgtcgaac gccgcgacca
     2881 cgccgcgcat tttcggtctc aggtcagcgc cacgcgcgta gtgcctccgc catgcggcat
     2941 tgaagaaatt aatttcgcag gatctttcga accctgacga cagaggtacc gtgttcttcg
     3001 accagctcac gaagctctgc ttcggataca gcaaattcct tcatccaata tcggagttca
     3061 tatggttcat tgaggttaat tcgagcgcga tcctgaggac cctt
//
LOCUS       DATILV010000754        21045 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2993327, whole genome shotgun sequence.
ACCESSION   DATILV010000754 DATILV010000000
VERSION     DATILV010000754.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 21045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21045
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2993327"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            230..766
                     /locus_tag="VLJ17_18075"
     CDS             230..766
                     /locus_tag="VLJ17_18075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24927.1"
                     /translation="MNARKPTDARTLPMIALSAAVFGLANAAAAQEAQKLFIEGDIVR
                     GNTPAGITGPVCVLANQFKRKENVVFRIRVRSVTGQPLDDKNLKGIVVELSDGQKLPA
                     SYRARPPANVRAAFGISEPTDYFWSAAWLIPQDYPTGSLSYRVVATDMEGNTQSWTPF
                     KDPRSLPMVMAGEVEYRK"
     gene            complement(801..2312)
                     /locus_tag="VLJ17_18080"
     CDS             complement(801..2312)
                     /locus_tag="VLJ17_18080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24928.1"
                     /translation="MHKLFPTAGCFVLFMLSDAAIGRSPSVDDSVRAEGLRPVSIDLC
                     QASNPIAKLSDCRNGTLPRLGKRIDAAMRTAIAKAGPHAAPLIKRDQTWFSDMVASVA
                     EDVSDDAATIKSMLQERLAALEGISAGFGRDGVVGLWANAFGTIDIEPARDGSVRAAV
                     VTASVYAPDDEQHYTCGIAALLLRPTPEGWLAGTPESTDAPGTDDRKPRAIVRLRRQG
                     LTLRVVAGDESRPHDTSGLDCTRDINQVTGTYFAWGGSGAAAAKPPAADAPSFDCQQP
                     KTADEEEICADPELAVNDRRLDRAWRQLLPRLDPVTRRLFAEDQREYARSQALQYLDY
                     LHPSSAKETWMVHHTGLGRDWLYRVQLERIAALEGFEETRRGFEGLWMANNARLMVTR
                     GDSGRLTAYGDKWFHNDRKSGCEYDIAGTTKGYAFKSDHERTNPDTLERDHGSLVVNR
                     FDDVFAKRRYKADGTPINSSDEPKCKRNGTISSTARLFPVRPSPDIETSHDSR"
     gene            complement(2447..3250)
                     /locus_tag="VLJ17_18085"
     CDS             complement(2447..3250)
                     /locus_tag="VLJ17_18085"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSV24929.1"
                     /translation="MRTLIAGLWLASTLAVGTASAQPFPFNEAGVTMGHWHLASRDVQ
                     ANKKIFTGMGGTLIAPGANESVMFPGVRVNLNFGSGGTGGTQGSVVNHVGFIVNNVQE
                     QVAKWKALGIVVLPGSNNRLDQAYVETPDGVRIEILEDKSQAMPIRHEHVHFFLPEAE
                     IAKAQAWYAKTFGGKVGTRNNAPVVDVPGGQLRFAKAEIAQAPTIGRVLDHIGFDVKD
                     LQAFIKKIEAEGIKLDEPYQKNETTGTAITYITDPWGTRVELVQRAPAL"
     gene            complement(3524..4357)
                     /locus_tag="VLJ17_18090"
     CDS             complement(3524..4357)
                     /locus_tag="VLJ17_18090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24930.1"
                     /translation="MPKHFSKSWFLAGSVLTGFACAALAPQVAAQQKASLPDFSSNQI
                     GWVATGEITGVAGGPPALRQDPAHAYVPNNTGRQPTYRIADLTNQNLKPWVKERMKKD
                     NDEVLAGKIAFTARSSCMPAGVPAFVTYPVRPVYFIQTPRQVLMIYSGDAQIRRIYLD
                     VPHSENPKPSWYGESVGHYEDDALVIDTVAQNDKTFVDYYRTPHTTKLHVVERWKLID
                     NGQKLEVTFTVDDPDAFYQPWSAMRQYRRVQQPMLEEVCAENNQHLFDYHIPVADKPD
                     F"
     gene            complement(4818..5915)
                     /locus_tag="VLJ17_18095"
     CDS             complement(4818..5915)
                     /locus_tag="VLJ17_18095"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV24931.1"
                     /translation="MKSFFTRKVISFGAAPLFALPACGKKGKRRRAKCDCTFSICRFL
                     LATTIALLAASAAPAQTPPSAGNYPTRPVRIIVPFAAGGPSDIFARLIGQKLSDQLGK
                     QFYVENMGGAGGNIGMGNAARATPDGYTIAVVSSSFMVNPGLYEKIPYDPERDFVPIT
                     IAAYAPNLLAVNPALPVNTVGELVALVRANPGKYNFGHSGVGTTPHLSGEVFRHAQGL
                     DLVAVPFNGSGPALQSALGGHTPISFVVLSPAVPLVKEGKMRALAVLSTTRSGALPDV
                     PTIVEAGYPGIEADTQQCVLAPVGTPREIVDLIYREIVAALATPDMKERMATLGFVPV
                     ANTPAEFAHMIGPEVARWKQIIREANIKADP"
     gene            complement(5943..7007)
                     /locus_tag="VLJ17_18100"
     CDS             complement(5943..7007)
                     /locus_tag="VLJ17_18100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSV24932.1"
                     /translation="MGTWKPSRRDALKTTALAAGAVFAVPLKAAAPAPSAVKPALIEA
                     ARREGKLSFYSALELPVAERFGKLFEAKYPGIAVHVERSGAERLYQRIGQLQESGIGA
                     VDIANSTDPAHYHDWKRNDWLAPYVTEDMAGHFTAEHVDPDGMFATVCAWLEVIGYNT
                     NLVKREDAPKGYADLLDRKWRGKLVKAHPSYSGAILTVTYLLVREFGWSYLEKLGQQR
                     VMQVQSAADPPKKIQIGERAVMTEGNDYNLALLKAQGQPVEAVNPVEGSPLIIVSCGI
                     FRNAPNPNAARLFQSYMFGAEAQQVFVDTFAHRSFHGLVKDRTGRAPLAEVKLLKADP
                     ALVLAQSEEIKARYAKIFGV"
     gene            complement(7032..8084)
                     /locus_tag="VLJ17_18105"
     CDS             complement(7032..8084)
                     /locus_tag="VLJ17_18105"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV24933.1"
                     /translation="MGPTACRWVSTHPMSYVLKWRSMMPNSRIWSVLAVAAALTYPAL
                     SQAQTPLGNYPDKPVKIIVPFAAGGPTDVVARLIATKLSERLGKQFYVENITGAGGNA
                     GMGQAARSMPDGYTILFVSSSYVVNPSLYPKIPYDPYKDFLPVTVAGDAPNILLVHPS
                     VPAKTVSELIDYIKANPGKVSYASAGTGTTPHLSGELFRLSLKLDVVHVPFNGAAPAI
                     QSLTGGHTPMGFTSLPPAIPLIQDGKIRPLAVSAEKRVAALPSVPTLGEAGLADQEAD
                     TMQAVLVPAGTPRGIVDFLYREIKAIVALPDVKERFAVLGLDPVTNTPEEFAAQIRKE
                     IAKWGKVIHDANIKME"
     gene            complement(8124..9092)
                     /locus_tag="VLJ17_18110"
     CDS             complement(8124..9092)
                     /locus_tag="VLJ17_18110"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV24934.1"
                     /translation="MHRIVRGLGISAALAAATAVHAQDAYPNRPVRIIVPFAAGGPPD
                     VISRLVAQKLSERWRQQVYVENLPGAGGNTGTATAARAAPDGYTLYMMSTGFMVNPSL
                     YAKVPYHPIKDFAPVTLAAASPNVLFVHPSVPAHSAKELIDLIKSSPGKYSYAQPSTG
                     STPHLSGELLKLQYGLDLVTVPFNGASLAVNSTLAGHTPIAFTALPPAIANIKEGNLR
                     GLAVTAAKRSAALPDVPTMAEAGVPDQEAETINGLLVPAGTPADIIARINRDAVAALS
                     MPDVNERLSALGFEPAVTTPAEFGARINMEIAKWDKVVRAAHIRIE"
     gene            9302..10273
                     /locus_tag="VLJ17_18115"
     CDS             9302..10273
                     /locus_tag="VLJ17_18115"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018517384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HSV24935.1"
                     /translation="MSSRKFTRQDLREAAEKYKNWGKWGPNDEIGTLNYTTPEDIIAA
                     AQLVRKGKVISLALNFDQFGPQGGKTKYPPMGRINPLHLMLRTGTDAYAGVLDKRGIR
                     ASDDVVVMPLQSGTQWDGLGHIFYEDRMWNGYDCREVSSAGAAKCGIEKTKNKMVGRG
                     VFLDVPLAMGKEELDDSYAITSADLEKTAAAQGVKIKRGDFVIVRTGQMERCQRLGSW
                     DGYPGGDAPGFSFETLDWIHKSEIAAIASDTWGCEVRPNESEEGINQPWHWITIPIMG
                     ITMGEIFQVAELAADCRADRVYEFMFVAPAIPITGAVGSPVNPLAIK"
     gene            complement(10304..11779)
                     /locus_tag="VLJ17_18120"
     CDS             complement(10304..11779)
                     /locus_tag="VLJ17_18120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HSV24936.1"
                     /translation="MGRMLVYQSATRRRVRSGAGITGLARLAGAFALLIAASGCLEID
                     KPELAIGIPDGYRAAHGAPEAATPALDWWRSFRSRELTSLVEQTVTANLDIAVAIAQI
                     VQADAQVRIAGAPLLPTIDYNASDTAAKASQLAGRGGGDSPFSRLYATSLSASYIVDF
                     WGKNRAALNAAIETSIASRYNREVVTLTAITSVADTYFQILAAQDRLRIARRSLADSS
                     RILFLIKQQFEAGTASDLNVAQQESLVETVRATIPPLEETLRQNIAALAVLVGKPPEH
                     FNARGGSMQAITVPRVTPGLPSELINRRPDVRQAEQQLESANYSVESARAAFFPTIQL
                     TGQVGFQSNALRALFGPGAWFYTAAASLTQPLFDGGVLLGQFELQKGLQAQFLQAYRK
                     SVLSAFSNVEQALIAVEQTTAQERIQENVVRASRRAFTLSEQQMNSGTVNMVTLLQVE
                     QTLFTAEDQLAQVRLARLLAVVSLFQALGGGWPPTVATSAG"
     gene            complement(12056..15340)
                     /locus_tag="VLJ17_18125"
     CDS             complement(12056..15340)
                     /locus_tag="VLJ17_18125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018268948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSV24937.1"
                     /translation="MSPSTVFIRRPVATILLTFGVAAAGAVAFFQLPVSPLPQVDFPT
                     ISVRAQLPGASPEVVATSVATPLERHLGQIADVTEMTSTSTVGGTRITLQFGLNRDIN
                     GAARDVQAAINAARVDLPASLRTNPTYRKVNPADAPILILALTSDTLRQGELYDAATT
                     VLSQKLSQVEGIGEVTVGGSSLPAVRVELNPSALFKYGIGLEDVRAALASANAHSPKG
                     AIEAGDRHFQIYDNDQATVAAEYKSLIIAYRNGAPVRLTDVGEVLDQVENIRNAGLAN
                     GKPSVLVILNRAPGANIIETVDRVYALLPELQAAISPAIDLTPAVDRSTTIRASLKEV
                     ERTLAISVILVILVVFLFLRSGRATLVPSVAVPVSLIGTFAAMYMLGYSLDNLSLMAL
                     TVATGFVVDDAIVVLENISRHIEAGVPRVEAAIRGAGEVSFTVISMSTSLVAVFIPIL
                     LMGGIVGRLFREFAMTLSVAIMVSLAVSLATTPMMCALLLKNTRHDRRGRLHRISEQF
                     FDAMLRGYRHTLAWALNHPRLIVAVLLATVATNFYLYSIVPKGFFPQQDTGRITGGIQ
                     GDQSISFQAMREKLQQFISIIQKDPAVDTVVGFTGGGQTNGGFVFMSLKPLNERKISA
                     DQVIRRLRGELAQVPGATLFLQAVQDIRVGGRSANAQYQFSLQADAVDELYNWAPKIL
                     TELQKVPQLTDVNSDQQNRGLETDITIDRETAARLGITVAQIDNTLYDAFGQRQVSTI
                     YNDRNQYHVIMEVAPKYWQNSDTLKDIYVSKSGGGVGGTQATNAVAGTVSGPKAAPTS
                     STVATDAARNLALNSIGNTGKGAASTGSAVSTAAETMVPLSAVTRYAPGSIPLAVNHQ
                     GLFVASTISFNLAPGSSLSDAVAAVSEVMTRLGVPATIHGTFQGTARAYEQSLRNQPW
                     LILAALIAIYIVLGVLYESYIHPITILSTLPSAGVGAVLALMLFNTEFSIIGLIGVIL
                     LIGLVKKNAIMMIDFALDAERTKGLTSQQAIYEACLLRFRPIMMTTSAALFGALPLAI
                     GLGDGGELRRPLGIAIVGGLILSQMLTLYTTPVIYLYLDRFSLWVRDRRGRPRDAPHG
                     PLVPGE"
     gene            complement(15337..18453)
                     /locus_tag="VLJ17_18130"
     CDS             complement(15337..18453)
                     /locus_tag="VLJ17_18130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019906136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MdtB/MuxB family multidrug efflux RND
                     transporter permease subunit"
                     /protein_id="HSV24938.1"
                     /translation="MSPSRPFIMRPVATTLLMIAILLSGVVAFRFLALAALPEVDYPT
                     IQVQTFYPGASPDVMTSSVTAPLEVQLGQMPALNQMSSATSAGASVITLQFSLSLSLD
                     VAEQEVQAAINAAGNLLPSDLPAPPIYAKVNPADAPILTIALRSETLKLPEVQELADT
                     RLAQKISQLPGVGLVTISGGQKPAVRIQADIRKLAAYGLNIDDLRTTLGNANVNTPKG
                     NFDGPTRASTINANDQLMNAEDYRNLVIAYRNGSPVRLRDVAETVDGAQNTKLAAWMN
                     VTPAVILNVQRQPAANVIEVVDNIKALLPQLQAALPAAIDVSVLTDRTVTIRASVVDV
                     EFELMLAVVLVVLVIFLFLRSARATIIPSLSVPLSLIGTFGAMYLLGFSLNNLTLMAL
                     TISSGFVVDDAIVVIENISRYIEEGDSPLEAALKGSEQIGFTIISLTISLIAVLIPLL
                     FMGDVVGRLFREFAITLAITILISAVVSLTLVPMACAKLLEPAAEVRENAFQRHARAW
                     FDRLIDGYAYLLRGVLDRQTATLLVALGTLVLTAWLYIIIPKGFFPVQDTGLIQGISE
                     APQSISFGAMAERQQALADAILKDPDVESLSSFIGVDGTNITLNSGRLLINLKPHETR
                     TADVSEIIRRLTRTAAAVGGISLFLQPVQDLTIDDAVSRTQYQFILEDANSRELADWA
                     PRLVEKLNSMAHFADVSSDIQANGLSAYIEIDRDTAGRFGITPATIDNALYDAFGQRI
                     VSTIFTNSNQKRVILEADPKQQSSLQSLTSIYVPTSTGTGQVPLSVVARVREETAPLR
                     IDHLGQFPATSISFNLAPGASLGEAVDDIMQAAQEIGLPRSAVIKLQGAALAFQRSLS
                     NELLLILAAIVTVYIVLGVLYESFVHPVTILSTLPSAGIGALLALMVARHDLTVIAII
                     GIILLIGIVKKNAIMMIDFALDAQRTENKSPREAIYQACLLRFRPILMTTFAAVLGAL
                     PLMVGTGVGSELRHPLGISIVGGLLVSQMLTLFTTPVIYLWFDRLQSRYFNIDEDRPE
                     LSAERPAE"
     gene            complement(18511..19833)
                     /locus_tag="VLJ17_18135"
     CDS             complement(18511..19833)
                     /locus_tag="VLJ17_18135"
                     /inference="COORDINATES: protein motif:HMM:NF008589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MdtA/MuxA family multidrug efflux RND
                     transporter periplasmic adaptor subunit"
                     /protein_id="HSV24939.1"
                     /translation="MDDRTTTDFARTQPLSRPVRHKRTAPKISRRLGLLTLVVAAAAV
                     SWWFYGRQPAPPPARPNAFAAATPVVAATAVSGDIDMTLNGLGTVTSLATVTIKSQLS
                     GQLVRVAYQEGQMINKGDLVAEIDSRPYELALAQAQGALERDQALLQTAELDLKRYQE
                     LAKTNAIPRQQLDTQTSLVAQDKGLVIADQAQIDVQKLNIAYCHVVAPVTGRAGLRLV
                     DPGNYVTAGDASGIVVITQLQPISVVFTVAEDNVPQIARRLRAGATLPVTAFDRSGVV
                     KLATGVLKTLDNQIDTTTGTLKLRAEFANEDDGLFPNQFVNVQLLVDTLHDATVVPTS
                     AIQRGAPGTFVYLVNADNTVTVKPVTLGPASAERIAIQSGLSPGDRVVVDGADKLRNG
                     AKVVPRDAGDRRIGPEARNEPPAVAPSGNATAAPVSAPNGGRRSRGGQ"
     gene            complement(19950..20357)
                     /locus_tag="VLJ17_18140"
     CDS             complement(19950..20357)
                     /locus_tag="VLJ17_18140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24940.1"
                     /translation="MAARRTSDQLQHASSELGAGSVVLQKFGIRFDNIERHADADRKA
                     YGVGSAWFVADRMRYRITFYFSDLMYCMLYWRGGALPSYRINSKSTASAFFPERLRVV
                     TRCHHVTGYIDAFSSVGKRSVTSGFGIWDRLMW"
     gene            20558..>21045
                     /locus_tag="VLJ17_18145"
     CDS             20558..>21045
                     /locus_tag="VLJ17_18145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011976074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HSV24941.1"
                     /translation="MSKSSKIARPTRRNFLKVAAATATASAVAAPNVVSAQGVINMRW
                     QSTWPSKDIFHEYAQDYAKKVNDMTGGDLKIEVLPAGAVVPAFGLLDAVSKGTLDGGH
                     GVLVYHYGKSTALSLWGSGPAYAMDANMLLAWHKYGGGKELLNKLYQSIGANVVSFPY
                     APL"
BASE COUNT         3963 a         6308 c         6752 g         4022 t
ORIGIN      
        1 gatttccacg atctcccggc gcaactgcca aagattctga ccgcgccggg tggtgcgcta
       61 tgtcagctca ttcgatatcc gactgcggtg tgatggcctg gggcggatct cgttctgatg
      121 gaatcacaca cgggaatgac accgagaatt ggcaatatcg gttccattcc accgaaaccc
      181 gctctagaac catccctaag cagcaaccga gatgagggag ggctcgctca tgaacgccag
      241 aaagcccacg gatgccagga cattgccgat gatcgccttg tccgcggcgg tttttggatt
      301 ggcgaacgca gcggcggcgc aagaagcgca gaaattgttc atcgaaggcg acatcgtgcg
      361 cggcaatacg cctgccggga taaccggtcc ggtctgtgtg ctcgccaatc aattcaaacg
      421 caaggagaac gtggtcttcc gcatccgcgt gcgcagcgtc accggtcagc cgctggatga
      481 caagaatctc aaaggcatcg tggtcgagtt gtcggacggc cagaaattgc cggcgtcata
      541 ccgcgcccgc ccgcccgcca atgtgcgcgc tgccttcggc atctcggagc cgaccgatta
      601 tttctggtcg gccgcctggc tgatcccgca agactatccg accggctccc tgagctatag
      661 ggtggttgcg actgatatgg agggcaacac gcagagctgg acgccgttca aagacccgcg
      721 atcgctgccc atggtgatgg ccggggaggt ggagtacagg aagtgaccgg ccgttgatcg
      781 gtgcttcctg acgcggcgcc ctaccggctg tcgtgactcg tttcgatgtc gggcgagggg
      841 cgcaccggga acaagcgcgc ggtcgaggag atggtgccgt ttcgcttgca ttttggctca
      901 tcagaactgt tgatcggcgt gccgtcggcc ttgtagcgcc gttttgcgaa cacgtcatcg
      961 aagcggttga ccaccagcga gccgtgatca cgctccagcg tgtccggatt ggttcgttcg
     1021 tggtcggatt tgaaggcgta gccttttgtc gttccggcga tgtcgtactc acagccgctc
     1081 tttcggtcat tatgaaacca cttgtcaccg tatgcggtca gcctgccgga gtcgccgcgc
     1141 gtcaccataa gccgtgcgtt gttagccatc cacaggccct caaagccgcg gcgcgtctct
     1201 tcgaatcctt cgagcgcggc aatgcgttcg agctgcacgc gatagagcca gtctcggccg
     1261 aggccggtat gatgaaccat ccaggtctcc tttgccgagg acggatgtag atagtcgaga
     1321 tattggaggg cctgggaacg agcatattcg cgctggtcct cggcaaaaag gcgtcgcgtc
     1381 acggggtcga gtcggggcag cagctgccgc caagcccggt ccagccgccg gtcattgacg
     1441 gcgagttcgg ggtccgcgca gatttcctct tcgtccgcgg tcttgggctg ttggcagtcg
     1501 aagctcggtg cgtcggcggc tggcggcttc gcagccgctg cgccggatcc gccccaggca
     1561 aaataggttc cggtaacttg gttgatgtcc cttgtgcaat ccaggccgct ggtgtcgtgt
     1621 gggcggcttt cgtcgccggc caccacccgc agcgtcaggc cttggcggcg aagccggacg
     1681 attgctcgcg gtttgcggtc atccgttccg ggggcatctg tgctttcagg tgttccggcg
     1741 agccagccct ctggcgtcgg ccgcaaaagc agcgccgcga tcccgcaggt gtagtgttgt
     1801 tcatcgtcgg gggcataaac ggaagccgtc accacggctg cgcggacgga gccgtcgcgg
     1861 gcaggctcga tgtcgatggt tccgaatgcg ttggcccata gcccgacgac gccgtcgcgg
     1921 ccgaagcccg cggagatgcc ctccaatgcg gcaaggcgct cctgcagcat ggatttgatc
     1981 gtggcggcat cgtcggacac atcttccgcg acgctggcga ccatgtcgct aaaccaggtt
     2041 tggtcgcgct tgatcagggg tgccgcgtgc ggcccagctt tcgctatcgc tgtcctcatg
     2101 gcggcatcga tacgcttgcc gagacgcggt agcgtaccat ttcggcagtc cgatagcttc
     2161 gcgatcgggt tgctggcttg gcagaggtcg atcgaaacgg gtcgcaggcc ttcggcgcgg
     2221 acggaatcgt ccacggaggg cgagcggccg atcgctgcat cgctcagcat gaagaggacg
     2281 aaacatcctg ctgtgggaaa tagcttgtgc atgactccgc ttccatgtgg cgtgcatggg
     2341 cgggcaaagg cgctcctggg ggcttccgaa ggatcgcgcc gtccccgcgc agccaccgca
     2401 acggttggca cgcttcgctt gcctgtccca cgggcagaac aaacttctat agcgcaggcg
     2461 cccgttgcac caactcgacg cgagtgcccc acgggtccgt gatatatgtg atcgcggtgc
     2521 cggtcgtctc gtttttctgg taaggctcgt cgagtttgat gccctctgct tcgatcttct
     2581 tgataaaggc ctgcaggtcc ttcacgtcga agccgatgtg atcgagcacg cgccctatgg
     2641 tgggagcctg tgcgatttcg gccttggcaa accggagttg gccgccgggg acatcgacga
     2701 ccggggcatt gttgcgggtg ccgactttgc cgccaaaggt cttagcatac caggcctgtg
     2761 ccttggcgat ctcagcttcg ggcaggaaaa agtgcacgtg ctcgtgccgt atcggcatgg
     2821 cttggctctt gtcttccaaa atttctatgc gcacgccatc cggcgtctcg acataggctt
     2881 ggtccagcct gttgttgctg ccggggagca caacgatacc gagggccttc cacttagcca
     2941 cctgctcctg gacgttgttg acgatgaagc cgacgtgatt caccaccgag ccctgcgtgc
     3001 cgccagtccc cccacttccg aagttcaaat tgacacgaac gccagggaac atgacagact
     3061 cgttagcgcc cggcgcaatc agcgtgccac ccatgccggt aaaaatcttc ttgttggcct
     3121 gaacatcgcg cgaagcgagg tgccagtgcc ccatggttac gcccgcttcg ttgaacggga
     3181 acggttgcgc actggccgtc ccgacggcca gcgtcgatgc gagccataga ccagcgatca
     3241 aagttctcat gactgcctcc ctgttggatc ggccttcgcc tattgcccgg cgaatgggtg
     3301 tgaagggcta ccagcttgcc gggatgcccg gaaggcgagt ccgcgctcaa aagtccagca
     3361 ccgtcgcccg ggttgagatc ctatgcaggc gcggcgggcg gggttaggac cgcttggtgc
     3421 aaaccccacc gccaacgcct ggagagggtg atgacggacc gcacagtaaa cgacctgccc
     3481 gccgcaacac atgcgctcca cagaagtcga gcggcgctcc cgctcaaaag tccggcttgt
     3541 ccgccaccgg gatgtggtag tcaaatagat gctggttgtt ctcggcgcac acctcctcga
     3601 gcatgggctg ctgcacgcgc cgatattgcc gcatggccga ccatggctga tagaaggcgt
     3661 ccggatcgtc aaccgtgaag gtcacttcca gcttttggcc attgtcgatc agcttccagc
     3721 gctccacgac gtgcagcttg gtggtgtgcg gcgtacggta ataatcgacg aatgtcttgt
     3781 cattctgagc gaccgtgtcg atcacgagcg catcatcttc atagtggccg accgattcgc
     3841 cataccagga cggctttgga ttctccgaat ggggcacatc gagatagatg cggcggattt
     3901 gcgcatcgcc ggaatagatc atcagaacct gccgtggagt ctggataaag tagacgggcc
     3961 ggaccgggta cgtcacgaaa gccggaacgc cggccggcat acagcttgag cgcgccgtaa
     4021 aggcgatctt tccggccagt acctcgtcat tgtccttctt catccgctct ttcacccagg
     4081 gcttcaaatt ttgattggtg agatcggcga tccgataggt gggctgcctg ccggtgttgt
     4141 tgggaacgta ggcatgggcc ggatcttggc gaagggctgg cgggccgcca gcgacacccg
     4201 ttatttcgcc ggttgcgacc cacccgattt ggttcgagga gaaatcgggc agggacgcct
     4261 tctgttgcgc cgcgacttgt ggggccagtg ccgcgcaggc gaagccagtc aagacgctgc
     4321 ctgcaagaaa ccagcttttt gaaaagtgtt tgggcattgt tccctccaca ttggtcgttc
     4381 tttggatcat tcgttgccgc ttgagaatgc gatctgaatt gtcactgacg tgaattatga
     4441 acctgaacta tcgcttgaca agtataggag ttatcctatt atatagtcta taacagctta
     4501 tatgataaat cctactgggg gacccaaaat gccgctcgcg ccgccccgcg tttcttcggg
     4561 ccgtcgccat taacgtccgg cgcggcgggt tcggtgcact acgcctctct ggcgaaaggg
     4621 ctgatgcagg aaattcctat ttttggcaag caattctctg ttccacgaaa ggagtcgctc
     4681 tccgggaaga acacggaatc gtccgcaggc tcttcaaatt gctgtgcgaa ttcgcgccgg
     4741 ccgcgtcaaa acggtgccaa acaggtcgga tttcgcaaaa tttcctgata atttccctga
     4801 tctcagcgaa ttcgccctca cgggtcggct ttaatgttcg cctcccggat gatctgcttc
     4861 caccgcgcca cctcaggccc gatcatgtgc gcaaattccg caggcgtgtt cgccaccggg
     4921 acgaagccga gcgtcgccat gcgctccttc atgtcgggcg tcgccagcgc ggcgacgatc
     4981 tcgcgataga tgagatcgac gatctcgcgc ggcgttccga ccggtgctaa cacgcattgc
     5041 tgggtgtcgg cctcgatgcc aggatatccg gcttccacga tggtcggcac gtcgggcaag
     5101 gcgcccgacc gcgtggtact gagcaccgcg agcgcccgca tcttgccctc tttaaccagc
     5161 ggtaccgcgg gcgagagcac cacgaaggaa atcggtgtat gcccgccgag cgccgactgc
     5221 agcgctggtc cggagccgtt gaacggcact gcgaccagat cgagcccttg cgcgtgcctg
     5281 aacacttcgc cggaaagatg cggcgtggtg ccgaccccgg aatggccgaa gttgtatttg
     5341 cccggattgg cgcgcaccag cgccaccagc tcgccgaccg tgttgaccgg cagcgccgga
     5401 ttgacggcga gcagattggg cgcgtaggcc gcgatggtga tggggacgaa atctctttcc
     5461 ggatcgtagg ggattttctc ataaagcccc ggattgacca tgaaactcga tgacaccacc
     5521 gcaatggtgt agccatcggg tgtggcgcgc gccgcgttgc ccatgccgat gttgccgccg
     5581 gcgccgccca tgttttccac atagaactgc ttgccgagct ggtccgacag cttctgcccg
     5641 atcaggcgcg cgaagatgtc gctcggaccg ccggccgcga acggcacgat gatgcgcacc
     5701 ggtcgggttg gataattgcc ggcgctgggc ggcgtctgcg ctggagcggc gcttgcggcg
     5761 agcagggcga tggtggtagc gagaagaaac cggcagatcg aaaaggtgca atcgcacttg
     5821 gcacggcgtc tcttcccctt cttcccgcaa gcagggagag cgaacagagg cgccgcgccg
     5881 aatgaaatga ccttgcgggt aaagaacgat ttcatcacgg atcttgctcg caatacggag
     5941 gcctacaccc cgaaaatctt ggcgtaccgt gccttgatct cctcgctctg cgccaacacc
     6001 aaggcgggat cggccttgag caatttcacc tccgccaggg gtgcccgccc ggtccggtcc
     6061 ttaacgagcc cgtgaaacga gcggtgcgcg aaggtgtcga cgaacacctg ctgggcttcg
     6121 gcgccgaaca tgtagctttg gaacagacgc gccgcattgg gattgggggc attgcggaaa
     6181 atcccgcacg acacgatgat caacgggctg ccctcgaccg ggttgacggc ctcgaccggc
     6241 tgcccctgcg ccttgagcag cgccagattg tagtcgttgc cttcggtcat cactgcgcgc
     6301 tcgccgatct ggatcttctt cggcggatcg gcggccgatt gcacctgcat tacgcgctgc
     6361 tgaccaagct tctccagata ggaccagccg aattcgcgca ccagcaggta ggtcaccgtc
     6421 aggatggcgc cgctgtagga tggatgcgcc ttgacgagct tgccccgcca tttgcgatcg
     6481 agcagatcgg cgtagccttt cggggcgtcc tcgcgcttga ccagattggt gttatagccg
     6541 atcacttcga gccaggcgca gacggttgcg aacatgccgt cgggatcgac atgctccgcc
     6601 gtgaaatgcc ctgccatatc ttcagtgaca taaggcgcca gccaatcatt gcgcttccag
     6661 tcgtggtaat gggcggggtc tgtgctgttg gcgatgtcta ccgcgccgat accgctctcc
     6721 tggagctggc cgatgcgttg atagagccgc tccgctcccg agcgctccac atgcaccgcg
     6781 atgccgggat atttcgcctc gaatagcttg ccgaagcgtt ccgcgaccgg aagctcaagg
     6841 gccgagtaga acgacagctt gccttcccgg cgcgccgcct cgatcagtgc cggcttgacg
     6901 gcgctcggtg cgggcgcggc ggccttgagc ggcacggcga acaccgcgcc ggccgcgagc
     6961 gctgtcgttt tgagggcatc gcgtcttgaa ggcttccacg ttcccattgg ccgcgtttcc
     7021 tgtcaggccc gtcactccat cttaatgttc gcgtcgtgga tgaccttccc ccacttcgcg
     7081 atctctttcc taatttgcgc cgcgaattcc tccggggtgt tggtgaccgg atcaaggcca
     7141 agcaccgcga agcgttcctt gacgtccggc agcgcgacga tcgctttgat ctcgcgataa
     7201 aggaagtcga cgattccgcg cggcgtgccg gccggcacca gcacggcctg catggtgtcg
     7261 gcctcctgat ccgcaagacc ggcttcgcca agcgtcggca cgctcgggag cgccgcaacg
     7321 cgcttttccg ctgaaaccgc gagcggacgg attttgccgt cctgaatcag cgggatcgcg
     7381 ggcggcagcg aggtgaaccc catcggggtg tgcccgccag taagtgattg gatcgccggc
     7441 gcagcgccat taaacggcac atgcacaacg tcaagcttca agctcagccg gaacaactcg
     7501 ccggacagat gcggggtggt gccagtgccg gccgaggcgt agctcacctt gccgggattc
     7561 gctttgatgt agtcaatgag ttcactcacc gtcttcgccg gcaccgacgg atggaccagc
     7621 aggatgttgg gcgcatcgcc cgcgacggtg acggggagga aatccttgta cggatcatag
     7681 gggatttttg gatagaggct tggattgacc acatagctcg acgatacgaa caagatggtg
     7741 taaccgtctg gcatggatcg cgcggcctgc cccatgccgg cgttgccgcc cgcgccggtg
     7801 atgttctcga catagaactg cttgcccaat cgttccgaca gtttggtcgc gatgaggcgg
     7861 gcgaccacgt cggtcgggcc gcccgccgca aacggcacga tgatctttac gggcttgtcg
     7921 ggatagttgc cgagtggggt ttgggcttgg gagagcgccg ggtatgtcag cgcagctgct
     7981 actgccaaga cgctccaaat tcgcgaattc ggcatcatgc ttctccattt gagcacgtag
     8041 ctcataggat gggttgaaac ccatcgacat gcggtggggc ccatgatggg tttcccttcc
     8101 gctcaaccat cctacgtccc cgtctactca atcctgatgt gggcagcccg cacaacctta
     8161 tcccatttgg cgatttccat gttgatgcgg gcgccgaatt cggccggggt ggtgacggcc
     8221 ggctcgaagc cgagggcgga caggcgctcg ttcacgtccg gcatcgacag cgccgcgacg
     8281 gcgtcgcggt tgatgcgcgc gatgatgtcg gcgggcgtcc cggccggcac caggaggccg
     8341 ttgatggttt ccgcttcctg gtcgggcaca ccggcctccg ccatggtcgg cacgtccggc
     8401 agcgccgcgg aacgctttgc cgccgtcacg gcaagcccgc gcaggttgcc ttccttgatg
     8461 ttggcgatcg ccggcggcag tgctgtgaac gcgatcgggg tgtggccggc gagcgtcgaa
     8521 ttcaccgcca gcgaggcgcc attgaacggc acagtcacga gatcgagccc gtactgcagc
     8581 ttcaacagtt cgcccgatag atgcggtgtc gagcccgttg agggctgcgc atagctgtac
     8641 ttgccgggac tgctcttgat gaggtcgatc aattccttgg cgctgtgtgc cggcacagag
     8701 ggatggacga acaggacatt gggcgaggcc gccgcaagcg tcaccggcgc gaagtccttg
     8761 atcgggtgat agggtacctt ggcatagagg ctggggttca ccatgaagcc ggtgctcatc
     8821 atgtagagcg tgtagccgtc aggcgccgcg cgcgccgcgg tcgcggtgcc ggtgttgccg
     8881 ccggcgcccg ggagattttc tacatagacc tgctggcgcc agcgctccga tagcttttgc
     8941 gcgaccaggc gcgagatcac gtcgggtgga ccgccggccg caaacggcac gatgatgcgt
     9001 accggacggt tgggataggc gtcctgagca tggaccgccg tcgcggccgc gagcgcggcg
     9061 ctgatgccaa ggccgcgaac gatccgatgc attgcatcct cccctgcgtt ttaccccggt
     9121 ggggtcatcg tccggcttga ccccgacgat ccagtaaccg ccgccttagc gatcgttccg
     9181 caacgctgcg ggttactgga ttcccgccaa aagcggggaa tgacaggtta gtgattgttg
     9241 catacagtgt caccccttcg cgccgatcct tcccgctatc ccatccgaaa agagtatgtc
     9301 catgtcgtca cgcaagttca cccgccagga ccttcgcgag gccgcggaaa agtacaagaa
     9361 ctggggcaaa tggggtccga acgatgaaat cggcacgctc aactacacga ccccggagga
     9421 catcatcgcg gccgcgcagt tggtgcgcaa aggcaaagtg atctcgctcg cgctcaactt
     9481 cgaccaattc ggcccgcaag gcggcaagac caaatatcct cccatggggc gcatcaaccc
     9541 gctgcacctg atgctgcgca ccggcaccga tgcctatgcg ggcgtgctcg acaagcgcgg
     9601 aatccgcgcc tccgacgacg tggtggtgat gccgctgcaa tccggcaccc aatgggacgg
     9661 cctcggccac atcttctatg aagaccgcat gtggaacggc tacgattgcc gcgaagtgtc
     9721 gagcgccggg gcggcgaaat gcggtatcga gaaaaccaag aacaaaatgg tcggccgcgg
     9781 cgtattcctt gacgtaccgc tggccatggg caaggaggaa ctcgacgaca gctatgcgat
     9841 cacgtcggcg gacctcgaaa agacggccgc tgcccagggc gtcaagatca agcgtggcga
     9901 cttcgtgatc gtgcgcaccg gccagatgga gcgctgccag cgcctcggaa gctgggacgg
     9961 ttatccaggc ggcgacgcgc caggcttctc attcgagacg ctggactgga tccacaagag
    10021 cgagatcgcc gcgatcgcca gcgacacgtg gggctgcgag gtgcgcccca acgaatccga
    10081 ggagggcatc aaccagccct ggcactggat caccatcccg atcatgggca tcaccatggg
    10141 agaaatcttc caagttgccg agcttgccgc cgactgccgc gccgacaggg tctacgaatt
    10201 catgttcgtg gcgcccgcga tcccgatcac cggcgcggtg ggctcaccgg ttaacccgct
    10261 agcgatcaag tagatggccg taggggcggg ctccggcaca ccgttatccc gcgcttgtcg
    10321 ccaccgtcgg cggccagccc ccgccgagcg cctggaacaa gctgacgacg gccagaaggc
    10381 gggcgagccg cacttgggcc agttggtctt ccgccgtgaa caaagtctgt tcaacctgaa
    10441 gcagggtcac catgttgacg gttccggaat tcatctgttg ctccgacagc gtgaacgcgc
    10501 ggcgcgaagc cctcaccaca ttttcctgga tacgttcctg cgccgtggtc tgctcgaccg
    10561 cgatcagcgc ttgctccaca ttggagaaag ccgatagcac cgatttgcga taggcctgca
    10621 ggaattgtgc ctggaggcct ttctgcaatt caaactggcc cagcaggacg ccgccgtcga
    10681 acaacggctg ggtcaggctc gccgccgccg tataaaacca tgcaccaggt ccgaacagcg
    10741 ccctcaaggc gttgctttga aagcccactt ggccggtcag ctgaatggtg gggaagaaag
    10801 cggcgcgagc ggactcgacg ctgtaattag cagattcgag ctgctgctcc gcttgacgca
    10861 catccggccg gcgattgatg agctcggaag gcaaccccgg cgttacgcgc ggcacggtaa
    10921 ttgcctgcat gctgccgccg cgcgcgttga agtgctccgg cggcttgccg accagtaccg
    10981 caagcgccgc gatattctgg cgcagcgttt cctcaagcgg tgggatcgtg gcccgtaccg
    11041 tttcgaccag gctttcttgc tgggcgacgt tgagatcaga ggcggtgccg gcctcgaatt
    11101 gctgcttgat caggaacagg atgcggctcg aatctgcaag actgcggcgc gcgatccgca
    11161 atcgatcctg agccgccaga atttggaaat aggtgtccgc aacggaggtt attgcggtga
    11221 gtgtcacgac ttcacggttg tagcggctgg ctatcgaggt ttcgatggcg gcgttcaacg
    11281 cggcacggtt cttgccccag aaatcgacaa tgtagctcgc gctcagcgat gtcgcgtaga
    11341 gccgcgagaa gggtgagtcg ccgccacctc gccctgcaag ctgcgacgcc ttcgcggcgg
    11401 tatcgcttgc attatagtcg atggttggca gcagcggcgc gcctgcaatc cgcacctggg
    11461 catcggcctg aacgatctgg gcaatcgcga ccgcgatatc caggttggcg gtgacggtct
    11521 gttcgacgag tgaggtcagt tcccgggatc ggaagctgcg ccaccaatcg agcgcgggcg
    11581 tcgcggcttc gggcgcacca tgcgcggccc gatagccgtc cggaatgccg attgcgagtt
    11641 cgggcttgtc gatctccagg cagcccgatg cggcgatcag gagggcgaat gccccggcga
    11701 ggcgggcgag gccggtaatc cccgctcctg acctgacacg tcgacgggta gccgattggt
    11761 acacaagcat gcggcccatt ccttactctg acagcaagcc acctcgagag tccgcctttg
    11821 tggcggacga ttccgcgctg gatttcagtg tccgaatcgt aacttagccc tttcaagatc
    11881 gcagcacagc ccggccgcaa acccaacggc aacgtgaccc gatccgttcg gttttcaaca
    11941 gctgtgggca gagccgcatg aggtcttccc ctttccatct tcgggccggc agggggggca
    12001 gcggcacaac tttgcccgtg tctcacacga aggcgggagc gaaaaggaga agccctcact
    12061 caccgggcac caacggccca tgcggcgcgt cgcgcggccg cccccggcgg tcgcgaaccc
    12121 acaggctgaa gcggtcgagg tagaggtaga tcaccggcgt ggtgtagagc gtgagcatct
    12181 ggctcaggat cagcccgccc acgatcgcga tgccgagtgg acggcgcaat tcaccgccgt
    12241 cgccgagacc gatcgcaagc ggcagggcgc cgaacagcgc cgcactggtt gtcatcatga
    12301 tcgggcggaa gcgcagtagg caggcttcgt agatcgcctg ttgcgacgtg agtcccttgg
    12361 tacgctcggc atcgagcgcg aaatcaatca tcatgatggc attcttcttg accaggccga
    12421 tcagcaggat cacgccgatc agcccgatga tgctgaattc ggtattgaag agcatcagcg
    12481 ccagcaccgc acccacgccg gcggacggca gggtcgacag gatggtaatc ggatggatat
    12541 agctctcgta gaggacgcca agcacgatgt agatcgcgat aagcgcggcg agaatgagcc
    12601 atggctggtt gcgtagcgac tgctcataag cccgcgcggt tccctggaat gtgccatgaa
    12661 tggttgccgg gacgccgaga cgggtcatga cttcgctgac ggccgcaacc gcgtcactga
    12721 gtgaggatcc tggggcaaga ttgaacgaga tagtggacgc gacaaacaga ccctggtggt
    12781 tgactgcaag tgggatgctg ccgggggcat agcgagtgac ggcgctcagt ggcaccattg
    12841 tctccgcggc cgtgctgacg gctgagccgg tcgatgccgc acccttgccg gtgttgccga
    12901 tggaattgag cgctaggttg cgtgccgcat cggtcgcgac tgtcgaactg gtcggcgctg
    12961 ccttcggccc gctcacggtg ccggcgaccg cgttagtggc ctgggtacca ccaacgccgc
    13021 cgccggactt gctgacatag atgtccttga gcgtatcgga gttctgccaa tatttcggcg
    13081 ccacctccat gatcacgtgg tactgattgc ggtcattgta gatcgtcgac acttggcgct
    13141 ggccgaacgc gtcgtagagc gtgttgtcga tttgggcgac ggtaatcccg agccgcgccg
    13201 cggtttcgcg gtcgatcgtg atgtcggtct caagccctcg gttctgctga tcgctgttga
    13261 cgtcggtaag ctgcggtact ttctgcagct cggtgagaat cttcggcgcc cagttgtaaa
    13321 gctcgtcgac ggcgtcggcc tgcaaagaaa actggtattg ggcattggca gaccggccac
    13381 cgacccgaat gtcctgaacc gcctgcagga acagcgtcgc ccccggaacc tgggcgagtt
    13441 cgccgcgcaa tcgccggatc acctggtcgg cggatatctt gcgctcgttc aatggcttga
    13501 gcgacatgaa gacgaagccg ccattggtct gcccgccacc ggtgaagccg accacagtat
    13561 cgaccgccgg atccttttgg atgatcgaga tgaattgctg cagcttctcc cgcatcgcct
    13621 gaaacgagat gctctggtcc ccctggatac cgccggtgat ccgtcccgta tcctgctgcg
    13681 ggaagaagcc cttcggaacg atcgagtaga gatagaagtt ggtcgcgacc gtcgccaaca
    13741 gcaccgccac gatgaggcgc ggatgattga gcgcccaggc gagagtatgc cggtaaccgc
    13801 gcagcatggc gtcgaaaaat tgctcagaga tacggtgaag gcggcctcgc cggtcgtgcc
    13861 gcgtgttctt gagcagcagc gcgcacatca tcggggtggt cgccaacgag accgcgagcg
    13921 acaccatgat cgccacggac aacgtcatgg cgaattcgcg aaacaggcgg cccacgatac
    13981 cgcccatcag cagaatcgga atgaacaccg cgaccagcga cgtgctcatc gaaatcaccg
    14041 tgaacgacac ctcgccggcg cccctgatgg cggcctcgac ccgcggaacg ccggcctcga
    14101 tgtggcgcga gatgttttcc agcaccacga tggcatcatc gacgacgaaa ccggtcgcga
    14161 ccgtaagcgc catcagcgac aggttgtcga ggctgtagcc gagcatgtac atggccgcga
    14221 aggtgccgat cagcgacacc ggaaccgcga cgctcggcac cagcgtcgcg cgtccgctgc
    14281 gcaggaacag gaataccacc aggatgacca ggatcaccga gatggccagg gtgcgctcga
    14341 cttccttgag cgacgcccgg atcgtggtcg aacggtcaac tgccggcgtg aggtcgatcg
    14401 ccggcgaaat cgcggcttgc aattccggca gcagcgcata gacgcggtca actgtctcaa
    14461 tgatgttagc gcccggcgcc cggttaagga tgacgagcac tgatggcttg ccgttggcga
    14521 ggccggcatt gcggatgttt tcgacctgat cgagaacctc gccgacatcg gtcaggcgga
    14581 ccggtgcgcc attgcgatat gcgatgatca gcgatttgta ctcggccgca acggtcgcct
    14641 ggtcgttgtc gtagatctga aagtgccgat cgccggcctc gatcgcgccc ttcgggctgt
    14701 gggcattggc ggacgccagg gcggcgcgga catcttcaag tccgattccg tatttgaaca
    14761 gcgcagacgg attaagctca acccgcactg ccggaagcga gctgccgccg accgtgactt
    14821 cgccaatccc ttctacctgg gacagcttct gcgacagcac ggtcgtggcg gcatcgtaaa
    14881 gctcgccttg gcgcaaagtg tcggacgtca gcgccagaat gaggatcggg gcgtcagccg
    14941 gattgacctt tcggtaggtc gggttcgtcc gcaggctcgc gggcagatct acccgggctg
    15001 cgttgatggc cgcctgcacg tcgcgtgcgg cgccgttgat gtcgcgattg aggccgaact
    15061 gcagggtgat acgggttccg ccaacggtgc tcgtcgaagt catttccgtg acgtcggcga
    15121 tctggccgag atggcgttcc agcggcgtcg cgacgctggt ggcgacgacc tcggggctgg
    15181 cgcccggaag ctgcgcccgc accgagatgg tgggaaaatc gacttggggc agcggcgata
    15241 ctggaagttg aaagaacgcg acggcgccgg ctgccgcgac cccgaaggtg agaagtatcg
    15301 tggccactgg ccgtctgatg aacaccgttg acgggctcat tccgccggcc tctccgcgct
    15361 gagttcgggc ctgtcctcgt cgatattgaa gtaacgactc tggagccgat cgaaccacag
    15421 gtagatcacc ggcgtggtga atagcgtgag catctggctg accaagagcc cgccgactat
    15481 cgagatgccg agcggatggc gcagttcgga gccgacgccg gtgccgacca tcagcggcag
    15541 tgcgccgagc accgccgcaa aagtggtcat caggatgggg cggaatcgca gcaggcacgc
    15601 ctgatagatc gcttcgcgcg gtgacttgtt ctcggtgcgc tgggcatcga gcgcgaagtc
    15661 gatcatcata atggcgttct ttttgacgat accgatcagc agaatgatgc cgatgatggc
    15721 gatcacggtg aggtcgtggc gcgccaccat cagcgccaac agcgccccga tgccggcgga
    15781 cggcaacgtc gacagaatgg tgacggggtg cacgaaactc tcgtacagca cgcccagcac
    15841 gatgtagacc gtgacgatgg cggcgaggat cagcagcaat tcgtttgaca gcgaacgctg
    15901 gaaggcgagg gctgcgccct gcagcttgat gacggcgctg cgcggcaggc cgatctcctg
    15961 ggcggcctgc ataatgtcat cgacggcttc gccgagcgac gcgccggggg cgaggttgaa
    16021 ggagattgag gtcgctggaa actggccgag atgatcgatg cgcagcggcg cggtttcttc
    16081 gcgcacgcgg gccacgaccg acagcggcac ctggccggtg ccggtcgagg tcggaacata
    16141 gatcgaggtc agcgactgca acgaagattg ctgcttggga tcggcctcga ggatcacccg
    16201 cttctggttg gaattggtga agatggtgga gacgatgcgc tgtccgaacg cgtcgtagag
    16261 cgcattgtcg atggtcgccg gcgtgatgcc gaaccgaccg gccgtatcgc ggtcgatctc
    16321 gatataggcg gaaagcccgt tggcctggat atcgctcgac acgtcggcaa agtgcgccat
    16381 ggaattgagc ttttccacga ggcgcggcgc ccagtcggcg agttccctgg aattggcgtc
    16441 ctccaggatg aattgatact gggtgcggct gacggcgtcg tcgatggtga ggtcctggac
    16501 cggctgcagg aacaacgaga tgccgccgac tgccgccgct gtgcgggtca gtctcctgat
    16561 gatctcgctc acatccgccg tgcgggtttc gtgcggtttg agattgatga gcagccggcc
    16621 gctgttgagc gtgatgttgg tgccgtcgac cccgatgaag gaggacaagc tctccacatc
    16681 gggatccttg agaatggcgt cggcgagcgc ctgttgacgt tcggccatgg cgccgaacga
    16741 aatcgattgc ggcgcctcgg aaataccctg gatcaggccg gtgtcctgca ccggaaagaa
    16801 gcctttcggg atgatgatat agagccaagc cgtcagcacc aaggtgccga gcgccaccag
    16861 gagcgttgcg gtctgccggt cgagcacgcc gcgaagcaaa tacgcatagc cgtcgatcag
    16921 ccggtcgaac catgcccggg cgtggcgctg aaatgcattc tcccgcacct cggctgccgg
    16981 ctcgagcagc ttggcgcagg ccataggcac cagggtgagc gacaccaccg ccgagattag
    17041 gatagtgatc gcgagcgtga tggcgaactc gcggaacagg cggccgacga cgtcgcccat
    17101 gaacagcagc ggaatgagta cggcgatcag cgagatcgtc agcgagatga tggtaaagcc
    17161 gatctgctcg gagcctttaa gcgcagcctc cagcggcgaa tcgccttcct cgatgtaacg
    17221 ggagatgttc tcgatcacca cgattgcatc gtcgacaacg aatcccgatg aaatcgtcaa
    17281 ggccatcagc gtcagattgt tgaggctgaa gccgagcagg tacatggcgc cgaaagttcc
    17341 aatcagcgac agcggtaccg ataggcttgg gatgatggtg gcgcgcgcgc tgcgcaggaa
    17401 caggaagatc accaacacca ccagaacgac ggcgagcatc agctcgaact ccacgtccac
    17461 gacggaggca cggatcgtca cagtgcgatc ggtcagcacc gatacgtcga ttgcggcggg
    17521 cagggcggct tgtaactgcg gcagcagcgc cttgatgttg tcgaccacct cgatgacgtt
    17581 ggcagcgggc tgccgttgaa cattgaggat gacggccggc gtcacattca tccacgccgc
    17641 gagcttggtg ttttgggcgc cgtcgaccgt ttcggcgaca tcgcgcagcc gtaccgggga
    17701 gccattgcga tacgcgatga cgagattgcg atagtcctcg gcgttcatca actgatcgtt
    17761 ggcgttgatg gtggacgcgc gtgtcggtcc gtcgaaattg cccttgggcg tgttgacgtt
    17821 ggcgttcccg agggtggtac gcaggtcgtc tatgttgagc ccataggcag cgagtttgcg
    17881 gatgtcggcc tggatgcgta cggcaggctt ttgtccgcca ctaatggtga cgagcccgac
    17941 gccgggaagc tgcgaaatct tctgggcgag ccgcgtgtcg gcgagttcct ggacttcggg
    18001 cagcttcagc gtttccgaac gcagcgcgat ggtcaggatc ggggcatcgg ctgggttgac
    18061 cttagcgtag atcggcggcg ccggcagatc ggacggcagc aggttgccgg ccgcgttgat
    18121 cgccgcctga acctcttgtt cggccacgtc gaggctgaga ctgagactga actgaagcgt
    18181 gatgaccgaa gccccggcgg atgtcgccga actcatctgg ttgagcgccg gcatctgccc
    18241 gagttggact tcgagcggcg ccgtaaccga ggaggtcatc acgtccgggc tcgcgcccgg
    18301 atagaaggtc tgtacctgaa tggtcggata gtcgacttcg ggtagcgccg cgagtgccaa
    18361 aaagcggaag gcgacgacgc ctgacagcaa gatcgctatc atcagcaacg tggttgccac
    18421 cggccgcatg atgaaggggc gcgacgggct catggatgca cccttggacg cactcttgag
    18481 tgaccgatca aacgcagggg cgaccggtcg tcattggccg ccccgcgacc gccggccgcc
    18541 gttgggagca ctgaccggcg cggccgttgc attgccggac ggtgcgactg cgggaggctc
    18601 atttcgcgcc tccgggccga tacgacgatc accggcatcg cgcggcacga ccttagcgcc
    18661 gttgcgtagc ttgtcagcgc cgtcgacgac gacgcggtcg cccggcgaga gacccgattg
    18721 aattgcgatc cgttcagcgc tggcggggcc gagcgtcacc ggtttcaccg tgacggtatt
    18781 gtcggcgttg acgagataca cgaacgtacc gggcgcgccg cgttggatcg cgctggtcgg
    18841 caccacggtt gcgtcgtgca gcgtgtcgac gagaagctgc acgttcacaa attgattggg
    18901 aaacaggccg tcgtcttcat tggcgaattc agcgcgcagc ttcaaggtgc cggtggtggt
    18961 gtcgatctga ttgtcgagcg tcttcaatac gccggtggcg agcttgacca cgccgctacg
    19021 gtcgaaggcg gtcactggta gggtcgcgcc ggcgcgaaga cgccttgcga tttgtggtac
    19081 attatcctcc gcgaccgtga agacaacgct gatgggttgc agctgggtga tgaccacgat
    19141 gccgctcgca tcgccggccg tcacgtagtt gccgggatct acaagccgca acccggctcg
    19201 gccggtaacg ggtgcaacga cgtggcaata agcgatgttc aacttctgca catcgatttg
    19261 ggcttgatcc gcaatgacaa ggcctttgtc ctgcgctacg agggacgtct gggtatcaag
    19321 ctgctgtcgc gggattgcat tggtcttcgc aagctcctgg tagcgcttga ggtcgagttc
    19381 ggcggtctgc aatagcgcct gatcgcgttc gagcgcgccc tgggcctggg cgagagcgag
    19441 ttcgtaggga cgcgaatcga tctcggccac gaggtcgccc ttgttgatca tctgcccttc
    19501 ctgataggcg acacgcacga gctggccgct gagttgcgat ttgatcgtca cggtggcaag
    19561 cgacgtcact gtgccgagcc cattgagggt catgtcgatg tcaccggaga cggcggtcgc
    19621 tgccacgacc ggcgtggcgg cggcaaatgc gtttggccgt gccggcgggg gtgcgggttg
    19681 acgtccatag aaccaccagc tcaccgccgc cgccgcgacc acaagcgtca gcagtcccag
    19741 tcgccggctt attttcggcg ccgtacgttt gtgcctcacc ggcctactga gtggctgtgt
    19801 cctggcgaag tccgtggtgg tgcggtcgtc catgagctgc gtcaacgtcc tgccgttcaa
    19861 ccgaataagc gtgcccgcat tgtgcggtca gcgcggcaat cacacccgtg attccaaaca
    19921 cggtcaaatt ctcacggatc gacgcgatct taccacatca ggcgatccca tattccaaaa
    19981 ccagacgtta cggacctctt tccgacggat gaaaaagcgt caatgtagcc ggtaacatgg
    20041 tggcaacggg taaccacccg caagcgttcc gggaaaaatg ccgacgctgt cgatttgctg
    20101 ttgatacggt aggagggcag tgcaccgccg cgccaataca gcatacagta catcaagtca
    20161 ctgaaataaa acgtgattcg gtaacgcatt cgatccgcca cgaaccatgc cgagccaacg
    20221 ccgtaagctt tgcggtcggc gtcggcatgg cgttcgatat tgtcgaatct gatcccgaat
    20281 ttttggagca cgacacttcc agcgcccaat tccgagctgg catgctgcag ctggtccgat
    20341 gtacgccggg cggccattat gccgacgtat cagcggctac acggtgcggc caagcagcgc
    20401 gttgcgccgc gactgcgtga cgggcgcagg taagtatgta atcgttgcgt taatccgctt
    20461 ggcggtgatt gaattgtcgt taaggggact gtaatcaacc tgatgatcaa aacgattagg
    20521 gcgccaacgc cgccctgaac acaaggagag gaacgccatg tcgaaatcgt ccaaaattgc
    20581 gcggccaacg cggcgcaatt tcctcaaggt cgcggccgcg accgctactg catcggccgt
    20641 agcggccccg aacgtcgtca gcgcccaggg ggtgattaac atgcgctggc agagcacgtg
    20701 gccatcgaaa gacatattcc acgaatacgc ccaagactac gccaagaagg tcaacgacat
    20761 gaccggcggc gacctcaaga tcgaggtgct cccggccggc gccgtggtcc cggcgtttgg
    20821 gctgctcgat gcagtatcta agggaaccct cgacggcggc catggcgtgc tagtctacca
    20881 ctacggcaag agcacggcgc tctcgctgtg gggatcgggg ccagcatatg cgatggatgc
    20941 caacatgctg ctcgcctggc ataaatacgg cggcggcaaa gagctgctca acaagcttta
    21001 ccagtcgatc ggcgcgaacg tcgtgtcatt cccctatgcg ccgct
//
LOCUS       DATILV010000755         4522 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3501668, whole genome shotgun sequence.
ACCESSION   DATILV010000755 DATILV010000000
VERSION     DATILV010000755.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4522
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3501668"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..107)
                     /locus_tag="VLJ17_18150"
     CDS             complement(<1..107)
                     /locus_tag="VLJ17_18150"
                     /inference="COORDINATES: protein motif:HMM:NF015640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system ParD family
                     antitoxin"
                     /protein_id="HSV24942.1"
                     /translation="MRRRGEGAKMKEGRYNNANGVVPAGLPLLEEQEATL"
     gene            complement(91..1263)
                     /locus_tag="VLJ17_18155"
     CDS             complement(91..1263)
                     /locus_tag="VLJ17_18155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isovaleryl-CoA dehydrogenase"
                     /protein_id="HSV24943.1"
                     /translation="MIPNTWTGFDFGLGEDLDRLRLSVSSFARDQIAPRAAEIDRSNT
                     FPRDLWPQMGELGLLGITVEEEWGGAGMGYLAHCVAMEEVSRASAAVGLSYGAHSNLC
                     VNQIRRNGTPEQKSRYLPKLISGAHIGALAMSEPNAGSDVVSMRARADRKGDRYVLNG
                     SKMWVTNGPVADTLVVYAKTDRTAGARGITAFIVESGFAGFAPAQKLDKLGMRGSDTS
                     ELVLSDCVVPVENVLGAVGNGVNVLMSGLDYERLVLAGGPLGIMQACLDLVVPYVHDR
                     QQFGQPIGRFQLIQAKLADMYVAANAAKAYVYAVARACDDGRVTREDAAGAILYAAER
                     ATWMALETIQCLGGNGYINDFPAGRLLRDAKLYEIGAGTSEIRRMLIGREIYEKTR"
     gene            complement(1295..1645)
                     /locus_tag="VLJ17_18160"
     CDS             complement(1295..1645)
                     /locus_tag="VLJ17_18160"
                     /inference="COORDINATES: protein motif:HMM:NF033634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4231 domain-containing protein"
                     /protein_id="HSV24944.1"
                     /translation="MTDATSPTLQRLEDQIAWCDKKSHDAQTCYKRLKLVQLFTAGII
                     PVLAIFSIPGTDRVTAILGLVILVVERLQQLNQYQTNWISYRSTCKAPSHRGIDRPGA
                     RQMAVGTTAARKTG"
     gene            1979..2713
                     /locus_tag="VLJ17_18165"
     CDS             1979..2713
                     /locus_tag="VLJ17_18165"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HSV24945.1"
                     /translation="MAPRPAAAQTALHPCPGNPDALSTARIITVEAATAPRVGLKHFP
                     ATLPLADKEVVLTFDDGPWPGTTPAVLDALRRECVRATFFLLGRNAMAHPELAKRELA
                     EGHTVAHHSFRHPLLDHMTPFAAEAEIDHGFAAVDRALYGRAAKRPHTPFFRFPGFAA
                     TPSLLDWLAAREIVVFGADLWAGDWIPMSPDQQLSQTLGRLEATHGGIILFHDTKRQT
                     AAMLPAFLRSLKAGGYRIVHVVGPTT"
     gene            2873..4147
                     /locus_tag="VLJ17_18170"
     CDS             2873..4147
                     /locus_tag="VLJ17_18170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009797457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HSV24946.1"
                     /translation="MTLFGATVAGAAECPGNPNALGTSRTIVVDPAEHPRLGTMQYHE
                     SLPLEDHEVVITFDDGPLPPRSTRVLEILAHECVKATYFMVGKMVHSFPDMVRRIHDA
                     GHTIGTHSYSHPFTFHKMSLERAQFEINEGIAAVAWALGDGTGPAPFFRVPGLLRAEG
                     VEHYLASRHIQVWSADFPADDWLRIGPAQVYARALQRIEANRKGILLLHDIQAKTVEA
                     LPYLLRELKRRGYRVVHVVPATPDRPKTATDPHQWIMHARENWPQAPIFIEAEPELPA
                     PSPVSFDFGTAFNLISVVHVPASRPHALLARGQNSLQPVSVWPRSLGAIPEMPTLLGG
                     PQLPAPSPQSFGYPGDGPAPRDAPKASLDVVPETTGAGNDIRRLLESLPPEDAPAGDR
                     QRNLEDGPTGPVSPPQLRGPIATAIMPRGAFP"
     gene            complement(4151..>4522)
                     /locus_tag="VLJ17_18175"
     CDS             complement(4151..>4522)
                     /locus_tag="VLJ17_18175"
                     /inference="COORDINATES: protein motif:HMM:NF013118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24947.1"
                     /translation="GRGLGLANKMRAYMLQDGGLDTMDANMMLGFDDDERNYGVAARM
                     LKMIGANRIQLLTNNPGKLEALSEGGVEVCARIALHTEIHPENRRYLATKAARAGHWL
                     DDVLEVGVEHQREAIRSRTGS"
BASE COUNT          822 a         1471 c         1359 g          870 t
ORIGIN      
        1 agcgttgcct cctgttcttc gagcaagggc aacccggcgg gcacgacgcc gttcgcgttg
       61 ttgtagcggc cttccttcat cttcgcccct tcaccgcgtc ttctcataaa tctcccgccc
      121 gatcagcatg cggcggattt cgctcgttcc ggcgccgatc tcgtagagct tggcgtcgcg
      181 caacagccgg ccggccggga aatcgttgat gtaaccgttg ccgccgaggc actgaatggt
      241 ctccagcgcc atccaggtcg cccgctcggc ggcgtacagg atggcgccgg cggcgtcctc
      301 gcgggtgacg cggccgtcgt cgcaggcgcg tgcgaccgcg tagacatagg ccttggcggc
      361 attggccgcc acatacatgt cggcgagctt cgcctggatg agctggaatc gcccgatcgg
      421 ctggccgaac tgctggcggt catgcacgta gggaacgacc agatcgaggc aggcctgcat
      481 gatgccgagc ggaccgccgg cgagcaccag ccgctcatag tcgagccccg acatcagcac
      541 gttgacgccg ttgccaaccg ctcccagcac gttctcgacc ggcaccacac agtcggagag
      601 cacgagttcg ctggtatcgg agccgcgcat gccgagcttg tcgagttttt gggccggtgc
      661 aaatcctgca aatccgctct cgacgatgaa cgccgtgatg ccacgtgcac ccgccgtccg
      721 atcggtcttg gcatagacca ccagggtatc ggccactgga ccattggtga cccacatctt
      781 ggagccgtta agaacgtagc ggtcgccctt acggtcggcg cgggcgcgca tcgagaccac
      841 gtccgaaccc gcattgggct ccgacatggc gagcgcgcct atgtgagccc cggagatcag
      901 cttgggcaga tatcgcgact tctgctccgg cgttccgttg cgcctgatct ggttgacgca
      961 gagattcgaa tgggcgccgt aggacaggcc aaccgccgcc gaggcgcgtg acacttcttc
     1021 catggcgacg caatgggcca gataccccat cccggcgccg ccccattcct cctcaaccgt
     1081 gatgccgagc agcccaagct cgcccatttg cggccacagg tcacgcggaa acgtattgct
     1141 gcgatcgatc tcggcggcgc gcggcgcgat ttggtcgcgg gcgaagctgg acacagacag
     1201 gcgcagccgg tcgaggtctt cgccgaggcc gaaatcgaag cctgtccaag tgttggggat
     1261 catgacccat tagcctgaag acttggcatt cgcctcaccc tgtttttctg gctgctgttg
     1321 tgccgacggc catttggcgt gctcctgggc gatcaatccc tcgatgcgac ggtgctttgc
     1381 atgtcgatcg atagctgatc cagttggtct gatattgatt gagctgctgc agcctctcta
     1441 cgaccaggat gaccaaaccg agaatcgcag tcactctgtc cgtcccggga atgctgaaaa
     1501 tcgccagtac ggggattatt cccgccgtga aaagctggac gagcttcaac ctcttgtagc
     1561 aggtttgagc gtcgtggctc ttcttgtcgc accaggcgat ttggtcttcc aggcgttgaa
     1621 gggttggcga cgtcgcgtct gtcatcgtaa tggggctcgc cgtatccgat ctcggttacg
     1681 cgagttcggc accgtcagat gtgcgcatcg gtaacggcga atgtgcatag acactccgga
     1741 acgaccccga tgagggcgta gcgtcgatgc catagcatta gcttggccac cggctgattt
     1801 acaggagtca ttgattttct caactgccat gcttacacaa accccatccc ataaagattg
     1861 ctgcggcggc cctctcccaa caggtccggc acggctccaa cggttccatt tgcgccacca
     1921 cgtcgcacaa acacctatcc ggaaggccgt atgtgcggcc gctttggcgg cggtcctcat
     1981 ggccccccgg ccggctgcgg ctcaaacggc tctgcaccct tgtcccggca acccggacgc
     2041 actctcgacg gcacggatca tcacggtcga ggcggcgacg gccccgcgcg tcggcctcaa
     2101 gcattttccc gcgaccttgc cgctcgctga caaggaggtc gtgctcacct ttgacgacgg
     2161 cccgtggccc ggcacaacgc ccgcagtgct cgacgcgctg cggagggaat gcgtgcgcgc
     2221 gactttcttc ctcctcggcc gcaacgccat ggcgcatccg gagctggcaa aacgcgaact
     2281 tgccgagggt cacaccgttg cccaccacag cttccggcac ccgctgctcg atcacatgac
     2341 cccattcgcc gcggaggcgg aaatcgacca cggttttgca gccgtcgaca gagctctcta
     2401 cggccgtgcg gccaaacggc cgcacacgcc gttcttccgc ttcccgggct ttgcagcgac
     2461 gccaagccta ctggactggc tcgcggcacg ggaaatcgtg gtgttcggcg ccgacttgtg
     2521 ggccggcgac tggatcccca tgtcgcccga ccagcaattg agccagacgc tcgggcggct
     2581 cgaagctacc catggtggca tcatcctatt tcatgataca aagcggcaga cggctgctat
     2641 gctgcctgca ttcttgcgtt ccctgaaagc agggggctat cggatagttc atgtggtcgg
     2701 accgacgacc taagataaag atcaaaaggt cacaaaacca tcactactta tccacgaaaa
     2761 attaaacttg ctgacagcta ttgcaacctt agaaagacag tggggtgctg aaccaccgct
     2821 gtgccgggaa agaacgggta cgatgcgcgg tgtgctgacg gccatatgtg ggttgaccct
     2881 ttttggggcg accgtggcgg gggcggccga atgcccgggc aatcccaacg cgcttggcac
     2941 cagccgaacc attgtggtcg atcccgccga gcacccgcgg ctgggcacca tgcaatatca
     3001 tgagagcttg ccgctcgaag accacgaggt cgtgatcacc ttcgacgatg gcccattgcc
     3061 gccccgctcg acccgggtgc tggaaatact tgcgcacgag tgcgtgaagg cgacctattt
     3121 catggtcggc aaaatggtgc acagcttccc cgatatggtg cggcgcatcc atgacgccgg
     3181 ccacaccatc gggactcata gttacagcca tccgttcacc ttccacaaaa tgtcgctgga
     3241 gagggcacag tttgagatta atgaaggcat cgccgcagta gcatgggcgc ttggcgacgg
     3301 caccggcccg gcgccattct tccgcgttcc cggactgctg cgcgctgaag gcgtcgagca
     3361 ctatctcgcc tcgcggcata tccaggtctg gagcgccgac ttcccggccg acgattggct
     3421 caggatcggc ccggcccaag tgtatgcgcg tgctttgcag cgcatcgaag ccaatcgcaa
     3481 gggcattttg ttgctgcatg atatccaggc taagaccgtg gaggcgctcc catacctgct
     3541 gcgggagttg aagcgacgcg gataccgtgt cgtacatgtg gtaccggcca cccctgatcg
     3601 ccccaagact gcaaccgacc cacatcaatg gatcatgcat gcacgcgaaa actggccgca
     3661 ggcgccgatc ttcatcgaag cggagccgga attgccggcg ccgagcccgg taagcttcga
     3721 ttttggcacg gcgttcaatt tgatctctgt cgtccacgtt ccggcgagcc gaccgcatgc
     3781 acttttggcc cgcggccaaa attcgttaca gccggtctcc gtgtggcccc gcagtcttgg
     3841 ggcgataccg gagatgccga cgttgcttgg tgggccccaa ctgccggcgc cgagtccgca
     3901 aagcttcggc tatccgggcg atggtccggc gccgcgggac gcacccaagg cgtcattgga
     3961 cgtggtgcct gagacgactg gcgcggggaa cgacatccgc cgcctcctag agtccctgcc
     4021 tccggaggat gcgcccgccg gcgaccgcca acgcaacctg gaagacggac ccaccggccc
     4081 cgtgtcaccg ccgcagctgc gcggaccgat cgccaccgca atcatgccac gtggggcctt
     4141 tccttagatg tcaggatccg gtccgcgatc ggatggcttc acgttggtgc tccaccccga
     4201 cctctagcac gtcgtccagc caatgcccgg cgcgcgcggc cttggtggcg aggtagcggc
     4261 ggttttccgg atggatttcc gtatgcagcg caatacgggc gcagacctcg acgccgcctt
     4321 ccgacagggc ttcgagcttg ccgggattgt tcgtcaatag ctgaatccgg tttgccccga
     4381 tcatcttgag catgcgcgcc gccacgccgt aattgcgctc gtcgtcgtcg aaaccgagca
     4441 tcatgttggc gtccatggtg tcgagtccgc catcctggag catataggca cgcatcttgt
     4501 tggcgagccc caggccacgc cc
//
LOCUS       DATILV010000756         2627 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4783989, whole genome shotgun sequence.
ACCESSION   DATILV010000756 DATILV010000000
VERSION     DATILV010000756.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2627)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2627)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2627
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4783989"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(452..1228)
                     /locus_tag="VLJ17_18180"
                     /pseudo
     CDS             complement(452..1228)
                     /locus_tag="VLJ17_18180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843600.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
     gene            complement(1225..2466)
                     /locus_tag="VLJ17_18185"
     CDS             complement(1225..2466)
                     /locus_tag="VLJ17_18185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008973599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSV24948.1"
                     /translation="MTERVCAFCLAVTLLLALHSREVVAQPTTGAPPAVGVVRAERQQ
                     ITETDEFIGRIQAVNRVALVARVTGFLEKRLFTEGAEVKRGDLLYEIEKPPFQAAVDA
                     AQSTVEQMEAQHRNAQLTLQRAQTLLSGPAGQQSNVDAALASERALAAQISGAQAQLE
                     TAKINLGYTEIRAPIDGKITSTSVTEGNVVSPTTGTLATIVSQDPMYVLFSISLRAGL
                     DLRARYAAKGGYSAVVIKLRLPDGRIYDQDGKLDYGSPTVAENTDTIVVRGVIPNPVF
                     PGMTAGQPGSRELTDGEFVTVLLEGVQPVTVLAVPRAAVLSDQQGDYVYVVDAQNKAQ
                     VRRIQQGQSTPTVAVISSGLAEGELVISEGVQRVRPGEAVSPSPATPPPSLSRPGQGG
                     ASGTAPSNAGAKPTPEAGASQ"
BASE COUNT          515 a          801 c          772 g          539 t
ORIGIN      
        1 gcctcttctt gcggccgatc ttgatgacga agggtcaatt cgacgagctt gaagtacgcg
       61 gctatctcga tcccaacaac cgcggcgacc gcgccgacga gtgcgaagcg atcgagacgt
      121 tcctcatgga ttcgctgaat aaaccgtaac atccatctta attcattgag tagttgccgt
      181 cggtgagcag ccgagaatcc agccttccgt gagttggatt gccaagtcct ccttcgagcc
      241 cgtttctatt tcgatcggcc gacaaaattc gcgccataga agatcgtcgc gatccaagtc
      301 gcgcgcccag tgccacatgg atcgtacttg gccgcggtct ttaatctgat ccggcatcgg
      361 gtctctgacg ctggggtaaa tctccgcgtg gaggacgaag acatgcttcg gaagccattt
      421 cgccttgttg gcccagcccg tctcgaacgg cctccggcaa gctgcggata aggacgatgt
      481 tgccgaactg ctccgcggtc gtcaggcgac ctagcgtttg aatgttcagt tgaaactgct
      541 ggtctttgcc gatcggccgt gccccgatgc ggccaacggg cgcctgaaca ttttgggcct
      601 ggatcgcgga aatgacatcg gcaggcgtca gttgcaggtt gtccagccgc tgcgtgtcga
      661 accagatgcg catcgaatag ttgagcgccc cgaagatgcg cgcctgcccg acgcccggca
      721 gccgcgacag cacgtccatg atattgatga tcgcgtagtt ggtgatgaac agggggtcct
      781 gctgcccgtt gtcgctatag agcgagagga attgcaggac cgccgatgat ttcttctgaa
      841 ccgtcaagcc ctctagctgg acctccgcag gcaactgcgc gagcgcggtc tgcacgcggt
      901 tgttgacgtt gacggtgttg atatcggggt cggtgtcgag cgcgaagcta acagtcaagt
      961 tgtatgagcc atcgttagcg ctggtcgatt tcatgtaaag catcttgtca acgccaacga
     1021 cctgcgcttc gatcggctga gccacactgg cttcgaccac tgctgccgaa gcgcccggaa
     1081 aagtggccga aacttgaacc tgcggcggca cgatgtcggg caactgcgcg aagggaatac
     1141 gggtgagcgc cagcaagccg gcgatggtga tgaccacggc aatcacgacc gccaatcgcg
     1201 ggcggtcgac aaagaacgcc gagatcattg actcgccccc gcctctgggg tcggcttggc
     1261 gccagcgttt gatggcgcgg tcccgctggc gccgccctgt cccggcctcg aaagacttgg
     1321 cgggggtgtg gcggggctcg gggacaccgc ttcgccggga cgaacacgtt gcacgccctc
     1381 gctgatcacc agctcgcctt ccgctagtcc gctgcttatc acggccacgg tcggggtcga
     1441 ttgcccctgc tggatgcgac ggacttgagc tttgttctgc gcatcgacga cataaacgta
     1501 atcgccctgt tgatcggaca gcacggcagc tcgcggaacg gctaacaccg tgactggctg
     1561 cacgccttcc agcagtacgg tcacgaattc gccatccgtc aattcgcgag aacccggctg
     1621 ccccgcagtc atgcctggaa acaccggatt aggaatgact ccacgcacga ctattgtgtc
     1681 ggtgttctcg gcgacggtgg gcgagccata atcgagcttg ccgtcttgat cgtagatgcg
     1741 cccatcggga aggcgcaatt ttatgaccac cgcactatag ccgcccttgg ccgcgtaacg
     1801 cgcccgtaaa tccagacctg cacgcagaga aattgaaaac agtacgtaca tcggatcttg
     1861 gctgacgatc gtcgcaaggg tcccggtcgt tggcgataca acattgccct cggtgaccga
     1921 ggtgctcgtg atcttgccat cgattggcgc gcggatttcg gtgtagccaa gattgatctt
     1981 agccgtttcc aactgcgctt gagcgccgga gatctgagcc gccaatgcac gttcggaggc
     2041 gagcgcggca tcgacattgg attgctgccc agcggggccg ctcaacagag tctgcgcgcg
     2101 ttgcagcgtc agctgtgcgt tccgatgctg cgcctccatt tgctccacgg tggattgtgc
     2161 ggcatcaacc gctgcctgaa agggcggctt ttcgatctcg tatagaagat cgcctctctt
     2221 gacctcggcg ccttccgtga acaaccgctt ctccagaaac ccggtgacac gcgcaacgag
     2281 cgccacccgg ttcaccgcct ggatacggcc gataaactca tccgtttcag taatttgttg
     2341 ccgttccgcc cgtactacgc cgaccgccgg cggtgcgccg gtcgtgggct gcgccaccac
     2401 ttccctggag tgcagggcaa gcaacagagt cactgcaaga cagaaagcgc atactctttc
     2461 agtcatctat ccctccgaag ccctgcaagt ctctcgaggc ccgcggcaac gagcggtaaa
     2521 ttcagctgat gcgaatgcgc ggccaaggac aacgtcctcg aactcttcaa cctgcaaaca
     2581 gcctaaatgt tcgggcttgt agccccccaa ctctgctagc ccgggcc
//
LOCUS       DATILV010000757         2963 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1976654, whole genome shotgun sequence.
ACCESSION   DATILV010000757 DATILV010000000
VERSION     DATILV010000757.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2963)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2963)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2963
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1976654"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..715)
                     /locus_tag="VLJ17_18190"
     CDS             complement(<1..715)
                     /locus_tag="VLJ17_18190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013948939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24949.1"
                     /translation="MAQQATIDQTDAGYVTMLPHLAAKQEINIYSHSTLLYWWPAWAF
                     GFVIALLNAGQEKFLATAQGAQPSSALGLTYLSILLLLIVFTNVRLRGINSVVALLTV
                     AFIAVVLAWFGWWDNIAKLIPYLSVHMNTGFYLVFSTGLLIIWLTMFFVFDRLTYWRI
                     RPGQVTVEHLIGGGAESFDTNGLHFQKLSSDFFRAALGFGAGDLSATAAGDRGAAIEI
                     PNVIFAERKVHGIEKLISVK"
     gene            complement(877..1179)
                     /locus_tag="VLJ17_18195"
     CDS             complement(877..1179)
                     /locus_tag="VLJ17_18195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24950.1"
                     /translation="MFDIRIHLSAVVLAGLIGAGGALAQSQTSPSVPNVEPTIAAPAA
                     EPSKAAEVEKWTIEQWDAAKATWAKEKVKWTSCQQMATDQKLTGRESWAFLYRCMT"
     gene            1409..2164
                     /locus_tag="VLJ17_18200"
     CDS             1409..2164
                     /locus_tag="VLJ17_18200"
                     /inference="COORDINATES: protein motif:HMM:NF018527.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1236 domain-containing protein"
                     /protein_id="HSV24951.1"
                     /translation="MDKNKLLMAVAAVALIAGTSGALAQQEPPRSAPPEKMAPKTPAA
                     PKAPTSEIHQNTVPSGSATHNGEADTNHKNAEERGDRTKSNRVGEAQPGGRPETTGQA
                     PQERRNDDRKEQGTTEEKKQGATEQKKLDGKASEERGSGRDNERDRATAGQATAPAKG
                     PNANLSVNITPENRTRIHEVFVKERSAPKVDHVTFNLSVGTAVPRSVRIVAVPQTIIE
                     IQPTWRGYEYFMVGDQIVIVDPRSMEIVAVLDV"
     gene            2251..2520
                     /locus_tag="VLJ17_18205"
     CDS             2251..2520
                     /locus_tag="VLJ17_18205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HSV24952.1"
                     /translation="MTMSGESLLVILLIGLIAGWLAGQIVKGTGFGLVADLCIGIIGA
                     FIGDWLLPRLGIHLGFGILAAIISATIGAVLLLVILRLVNRRGRW"
     gene            2744..>2963
                     /locus_tag="VLJ17_18210"
     CDS             2744..>2963
                     /locus_tag="VLJ17_18210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="signal transduction histidine kinase"
                     /protein_id="HSV24953.1"
                     /translation="MGRSETALRAAQQSSCKQYNALDTRNLPAIARIVTAKYDRGAAF
                     NRQHPFVDVLLSDITDSGEALDVSNPVPE"
BASE COUNT          667 a          859 c          843 g          594 t
ORIGIN      
        1 gcttcacaga gatcagcttc tctattccgt gcactttacg ttcggcgaag ataacattcg
       61 gaatttcgat tgccgccccg cgatcgcctg ccgcggttgc gctgaggtca cccgcaccga
      121 aacccagcgc cgcgcgaaaa aaatccgagc tgagcttctg aaaatgcagc ccgttggtat
      181 caaagctttc ggcgccgccg ccgatcaggt gctctacggt cacctgcccc ggccgtatgc
      241 gccagtaggt caaccgatcg aacacaaaga acatcgtcag ccaaatgatc aacaggcccg
      301 tcgaaaacac cagatagaag ccggtgttca tatgcacaga cagatacgga atcagcttgg
      361 cgatgttgtc ccaccagccg aaccaggcca gcacgacagc gataaacgcg acagtgagca
      421 atgccacaac cgaattgatt ccacgcaacc ggacgttggt gaaaacgatc agcaggagga
      481 ggatcgacag atatgtaagg ccaagcgccg aactcggctg ggcgccttgc gcagtagcca
      541 gaaacttctc ctgcccagcg ttcagaaggg caatgacaaa gccgaacgcc caggccggcc
      601 accagtacag aagagtcgaa tggctgtaga tgttgatctc ctgcttggct gcaagatggg
      661 gcaacatggt gacgtatccg gcgtccgttt ggtcgatggt ggcctgctgt gccatgactt
      721 taccttatgg cgtagcggaa tgggggacat cggcgcttgc gcgcccttag gtctggtggc
      781 cgattgccgt ctgtataaaa attagggcac gatcggcatc agacagccac ccagcgcgct
      841 ttcgcgcggc gggtggcaat catcgtgcgc gcgtcattaa gtcatgcagc ggtagaggaa
      901 cgcccagctc tctcttccgg tgagtttctg gtctgtggcc atctgctggc agctagtcca
      961 ttttaccttt tccttggccc acgtcgcctt ggcggcgtcc cactgctcga tcgtccattt
     1021 ttcgacctca gccgccttgc taggctcggc ggccggcgcg gcgattgtcg gctccacatt
     1081 tggcacggac ggagaggtct gagactgtgc aagggcgccg ccggcgccaa taagtccagc
     1141 aagaacaacg gcagataggt ggatacggat atcaaacatg gcacattatt ccttttttaa
     1201 aatgatttat ctatcgaccg taaacgttca tacgttcgga ttgttcccgt gcaattaaat
     1261 atactcagac taactttttt ggggaccaca tttttcgaat tgggaaagga ggctttggaa
     1321 atctgcgact gaggtggaac gatttcccac gcatcgggtt tatccaatcc caccaggcgg
     1381 gaaagcttct cacaaaggaa attctacaat ggacaagaac aagttgttga tggccgtcgc
     1441 agccgttgct ctcatagccg gcaccagtgg cgctttggcg cagcaggagc cgccgcgtag
     1501 cgctccgccc gagaagatgg ctccgaagac gccggctgct ccaaaggcgc cgaccagcga
     1561 gattcatcag aataccgtcc cgagcggcag cgccacgcac aatggcgagg cggataccaa
     1621 ccacaaaaat gccgaggaac gcggcgatcg aaccaagtcg aaccgcgtgg gcgaggccca
     1681 acccggcggc cgcccggaga ctaccggcca ggccccgcag gagcgccgca atgacgatcg
     1741 caaggaacag gggactacgg aggagaagaa gcaaggggct acagagcaga agaagcttga
     1801 tgggaaggcg agtgaagagc gcggaagcgg tcgcgataac gagcgcgatc gcgcgaccgc
     1861 cggccaagcg acggcacccg ccaagggtcc caatgccaac ctgtcggtca acattacgcc
     1921 cgaaaaccgc acccggatcc acgaggtctt cgtcaaggaa cgctcagccc ccaaggtcga
     1981 ccacgtcacc tttaatctat cggtcgggac ggctgtgccg cgctcggttc gcatcgtcgc
     2041 ggttcctcaa acgatcatcg aaattcaacc gacgtggcgt ggctatgaat atttcatggt
     2101 cggcgaccag atcgtaatcg tggacccgcg ttcaatggaa attgtggcgg tcctcgacgt
     2161 ataaacgccc acatcatcta actacttcag cggggctggg atatcccggc cccgcttttt
     2221 cgtatctccg gcttcatcta gtatcggagc atgaccatgt caggtgaaag tctgcttgtc
     2281 attttgctga tcggattgat cgcgggttgg cttgcgggcc agatcgtgaa aggtaccggt
     2341 ttcggcctcg tggcggacct ttgcatcggt atcatcggcg cttttatcgg cgattggcta
     2401 ttgccccgcc tggggatcca tcttggcttc ggtatcctgg ccgccatcat ctccgccacc
     2461 atcggcgccg ttctgcttct ggtcattctc aggctcgtca acagacgagg ccgatggtga
     2521 gtttgccgca cgtgttctca ctttcgccag tgctggcgat cactgcccgc aagatgaccg
     2581 gcgctccagc tcggcaatcg ataacaagca acgcgactcc aatgtcgctc actcaattag
     2641 ccgtcgacga ggggccagca caacagcgac ggactgctgt tgcacggatg ggacgcggcc
     2701 acccaggtta cggcattcat aagcagggcg ggttcatgga tgattgggtc gatccgagac
     2761 agccttacgg gcggcgcaac agtcttcttg caagcaatat aacgcgctcg atacgcgcaa
     2821 tttgccggca atcgcgcgta tcgtcaccgc aaaatatgac cggggtgcag ccttcaatcg
     2881 tcagcatcct ttcgtggatg ttctactctc ggacattacg gacagtggtg aagcactcga
     2941 tgtaagcaac ccggtgcccg aag
//
LOCUS       DATILV010000758         4566 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2995039, whole genome shotgun sequence.
ACCESSION   DATILV010000758 DATILV010000000
VERSION     DATILV010000758.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4566
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2995039"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1586..2674
                     /locus_tag="VLJ17_18215"
     CDS             1586..2674
                     /locus_tag="VLJ17_18215"
                     /EC_number="2.3.1.46"
                     /inference="COORDINATES: protein motif:HMM:NF003776.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-succinyltransferase"
                     /protein_id="HSV24954.1"
                     /translation="MPVLVEKFPFEDPSSKLFQSPRDVAPKNFHEDQSKYLNIGLINN
                     MPDAAMEATARQFLKLLGAAGQGITIRLKLFSMPGIPCSQWRRQHISTHYSDFRDLWS
                     SHLDGLIVTGTEPRASDLRDEPYWRCLSEIIDWAEENTIATVWSCLAAHAAVSHLDGI
                     GRSPLAEKCFGLFQHTKEEDSRLLAGLPSRISTPHSRWNEIPEGALVSAGYRILSKSA
                     EAGVDMFVKERKSLFLFFQGHPEYDTDSLAREYRRDIGRFLRGERDSYPSLPKGYFDE
                     QTEDLLKTFRTRALSNRRDELLSEFPTEHVTVSLFNSWQSQASCTYRNWLNYVLEHKA
                     SRTTIARRLRYADKRQLTSRGGVTLGNH"
     gene            2730..3212
                     /locus_tag="VLJ17_18220"
     CDS             2730..3212
                     /locus_tag="VLJ17_18220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24955.1"
                     /translation="MKSSPSPSPTFHLRGREIIEADHERVARLLAKGFQRPVWYYAQA
                     LRRLSLHPTPADLSKYGFVMEADGVAVGAALLTFSTVRSGENTQTRWNVTSWYVEPAY
                     KSVAAVFTSRALRRKDVTYINISVRPAARPNINAEGVRPYSQGQYVVPPSRAGRPKAR
                     "
     gene            complement(3709..>4566)
                     /locus_tag="VLJ17_18225"
     CDS             complement(3709..>4566)
                     /locus_tag="VLJ17_18225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain-acyl-CoA synthetase"
                     /protein_id="HSV24956.1"
                     /translation="LCCGNGLRGDIWEQFKQRFHIPQILEFYAATEANVSLFNVEGRP
                     GAIGRTPPFIAHRSALALVKFDIERNAPLRDENGFCVRCAPNETGEAIGRISGDAGAR
                     FDGYTDRQATEKKILRDVFAHGDAWFRTGDLMRRDDGGFYYFVDRIGDTFRWKGENVA
                     TSEVAAAITAFPGIVDANVYGVAIPGTDGRAGMAEIVCSGAIDLLAFREHLAQRLPRY
                     AHPVLLRLRKEIDITPTFKQLKRGDAQDGYDPSTCPDALYVNDPDRRAYVAMDQQLYQ
                     RIRSGKMQL"
BASE COUNT          986 a         1247 c         1329 g         1004 t
ORIGIN      
        1 cttgcacagc tcggctcacg tctcatggat gccacctcga aaaagcttgc cgcggagttc
       61 tttgagacgt tcggcgaagc ggtcgccccg acgccggaga cagctgccgc agagcccgcc
      121 gcaacggaaa agaagaaggg ctggttccgc aaattgatca aaacataatt cgacacacag
      181 gcggtgtgcg ggatcacgcg aacgggatgg catcaaagag gaaactcgcg gccggccatc
      241 cgttgaagcg acgttgatcg ggtgccccaa aatcgcgatc aggctttttg cagtgcctcc
      301 cgcaacgcga gggtatgttg ctctaattgg gcaacggtgt gcctcaattt gcaattctct
      361 gcttggagaa acgccagcaa gctgatgggt tggcagtcgg gatttcgatg cctctgtttt
      421 tgtcgccttg actccacgtt tttgatcttt aggacgttcg cactcatggc agctcctctt
      481 tgccttttac tttactactc cgcgtaacaa ctatctccat aggcgaatac ttctgtttga
      541 agtcaagcgt tgtacactct agctcgagag ccaggttaac cggataggtt aaggtcacgt
      601 tggtgttgac gtggtggcaa tggcgcctca gaagagcgca tccagacttg ggcggacttg
      661 tgatggattg gaaaaacgta atggatactt gcggtgttcc caagcgaatg ccgtcaatat
      721 tacgacggtc gcccggcttg cggtgaaagt ggcgcaaggg caaaacgtct tgaggctgat
      781 gggtggtccg acggcaagca gccggaactg aacgttcaaa caatcgtggg tgggttagcc
      841 gcggcatcgc gtccgccgca atgcgcgcat ctgccactct ctcgccgtct cgcgattgag
      901 gaccacccgc gctacaaaag ctgacaaatg cacgccgtcc ggatgcgatg cacaatcgca
      961 aatcctgact gggaaaggcc gtcgcaagca aagcccttcg cggtccgtgc gcactcacat
     1021 gaagtccccc gcctgcccta gtcattggca agttgccagg ttgaataccg tcacccgaca
     1081 atcctgcgta gtgtttgtga ccttaagtag tttactttgc gccgcttact tgaaccttta
     1141 ttgttggacc acaggcagaa tgcgcaaaca atcgtacgaa ggtcggttgt tacacaaagt
     1201 taacaaagcg tcatttttcc gcgaccaaat gccacccggc ggtgaaatag attttacatg
     1261 atgttgcacc gcgggaaaac gcggaccaac cttggtgttt tccaacaggc ttccctgcgc
     1321 agaactgaac gtacaattgg tgcgtgccgt tccgggacgt gcgccaccgg aatctcaatt
     1381 cagcgcaact cgatgcagcc ggtacgatca agggcagcgg gcacataatt cgcggtgcgt
     1441 tgctgcgtct ctgctatgtt aatcagattg ttaaaataac attgatcagc gctaccgact
     1501 tcggtaatgt taagcaaagg tagcttgtcg tgaggatccg gtctgtgacc ctgccgagct
     1561 cgagcgcgta tttttggagg agccggtgcc tgttttagtt gagaaatttc cgttcgagga
     1621 cccgagctcc aagttgttcc aaagcccgcg cgatgttgcg ccgaagaatt ttcatgagga
     1681 tcaatcgaag tatctcaaca tcgggcttat caacaatatg ccggacgccg ccatggaagc
     1741 cacggcgagg cagttcctta agttgctggg agcggcggga caggggatca cgatccgact
     1801 gaagctgttt tccatgcctg gaataccgtg cagtcaatgg cgacgccaac atataagcac
     1861 tcattattcg gattttcgtg atctttggag cagccatctc gatggcttga tcgtcacggg
     1921 caccgaaccg cgtgcctccg accttagaga tgagccgtat tggaggtgcc tgtcggaaat
     1981 tatcgactgg gcggaagaaa acaccatcgc gacggtgtgg tcgtgcttgg cggcccacgc
     2041 ggctgtctcg catcttgatg ggatcgggcg gtcgccgctt gccgagaaat gtttcggtct
     2101 atttcagcac acaaaggagg aagacagtcg gctgcttgca ggcttgcctt cgcgaatttc
     2161 gaccccgcat tctcgttgga acgaaattcc ggagggtgcc ctcgtctcgg ctggctaccg
     2221 cattctcagc aaatcggccg aagcgggggt cgatatgttc gtgaaagaga gaaagagtct
     2281 ctttctattt ttccagggtc accccgaata cgacactgac agtttagctc gcgaatatcg
     2341 ccgggatatt ggacggtttt tgcgcggtga gcgggacagt tatccgtcat tgccaaaagg
     2401 ctattttgac gaacaaaccg aagatttact caaaacattc cgcacgcgcg cactttctaa
     2461 caggcgtgac gaactgctgt cggaatttcc aacggagcat gtgacggtct cgctgttcaa
     2521 ttcctggcaa tcacaggcgt cgtgcacata ccgtaattgg ctgaactatg ttctcgagca
     2581 taaagcatcg agaaccacaa ttgcccgtcg actgcgatat gccgataagc gtcaattgac
     2641 aagccggggt ggggtcacac tcggaaatca ttgacacgac gtgagcggat acgactgtag
     2701 atctgaggac ggcgcttgat tccactgcat tgaagtcgtc cccatcacct tccccgacct
     2761 tccacttgcg cggccgcgag attattgagg ccgatcacga gcgggtggcg cggctgctgg
     2821 cgaagggctt tcagcgtcct gtttggtact acgcgcaggc tctgcgtcgg ctatcgctac
     2881 atcccacgcc ggcggatttg tcgaaatacg gattcgtgat ggaggccgac ggcgtcgcgg
     2941 tcggggcagc cctgttgacc ttttcgaccg ttcgatccgg cgagaatacg caaacgcgat
     3001 ggaatgtcac gagttggtat gtcgagcctg catataaaag cgtcgcggcg gtgttcacgt
     3061 cgagagcgct tcggcgcaag gatgtgacat acatcaacat ttccgttcga ccggcggcgc
     3121 ggccgaacat caatgccgag ggggttcggc cctacagcca gggacaatac gttgtcccgc
     3181 cttccagggc gggccggccg aaggcgcggt gaggggtatg cgggatggac aagctacccg
     3241 acgtgccatc tgaaacggct gaccacccat tgttatcggc ccacgcagga ttcggctgca
     3301 tgagtctctg atgtatgacg aaggtgcgcg cctatccgtt cgtgcttctt ccgcgtcttt
     3361 tcaaacgccg ggtgccgggg cgttcaactc atctattgcg gcgatattga cgatttggtc
     3421 agatttgtcg gaccgccagg aagattcctg gcgcggcgag gacaactgtt atcagcatag
     3481 actcgaacgg gccgattacc ggtttgatcg gcagatataa cgaaaggaag tcaccgagat
     3541 tttcaaaggc ctcgccgcgc ctcggtgaca tttctggcgg cctaagccgg tcggtggcat
     3601 agcgcgtcaa ctctaacgtt tatttcggtc attcggaggc gccgccagct ggtggcgggt
     3661 cacgcagtga cgccgaagag aagaggggcc gtcatggcgt tgcagtcgct atagctgcat
     3721 cttgccgctc cggatacgct ggtaaagctg ctgatccata gcgacgtagg cgcggcgatc
     3781 cgggtcattg acatagagtg catcggggca ggtgctcgga tcgtaaccgt cctgcgcatc
     3841 cccgcgcttc aactgtttga aggtgggcgt gatgtcgatc tccttgcgca gacgcaacag
     3901 caccgggtgg gcatatcggg gcaggcgctg tgcgagatgc tcccggaacg ccaaaagatc
     3961 gatcgcgccg gaacacacga tttccgccat gccggcgcgt ccatccgtgc ccggaatggc
     4021 tacgccatac acgttggcat cgacaatgcc gggaaacgcc gtgatggcgg ccgcaacttc
     4081 cgatgtcgcg acattttcac ccttccagcg aaacgtgtcc ccgatgcgat ccacgaaata
     4141 ataaaagccg ccgtcgtcgc gccgcatgag gtcgccggtg cgaaaccagg cgtcgccgtg
     4201 tgcgaacacg tcacgcaaaa tctttttctc agtcgcttgg cgatccgtat atccgtcgaa
     4261 acgcgcgccg gcgtcgccgg aaatccggcc gattgcctcg ccggtctcgt ttggggcaca
     4321 acgtacgcag aagccgttct cgtcgcgcag cggcgcattg cgttcgatat cgaactttac
     4381 caacgcgagc gcggagcggt gcgcaatgaa aggcggggtc cggccgatgg caccgggccg
     4441 gccttcgacg ttgaacaggg atacattggc ttcagtcgcc gcatagaatt cgagaatttg
     4501 cgggatatga aatcgttgct tgaactgctc ccaaatgtcg ccgcgcaacc cgttgccgca
     4561 gcacag
//
LOCUS       DATILV010000759         4472 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2741654, whole genome shotgun sequence.
ACCESSION   DATILV010000759 DATILV010000000
VERSION     DATILV010000759.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4472
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2741654"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..349)
                     /locus_tag="VLJ17_18230"
     CDS             complement(<1..349)
                     /locus_tag="VLJ17_18230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosylmethionine:tRNA
                     ribosyltransferase-isomerase"
                     /protein_id="HSV24957.1"
                     /translation="MRTDLFDFDLPPDRVALRPASPRDSARLLVVRPGHDPLLEDRVV
                     RDLPALLSPGDQLVVNDTKVIPAQLSGWRIGGASAPRIEATLIRRLDGSRWRALVKPA
                     RKLNPGDVVRFGEE"
     gene            complement(815..955)
                     /locus_tag="VLJ17_18235"
     CDS             complement(815..955)
                     /locus_tag="VLJ17_18235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24958.1"
                     /translation="MDLASILDKNAIAKITKNKKLVFHAVGDTGGVNTPTYIEAVARF
                     ME"
     gene            complement(1326..1805)
                     /locus_tag="VLJ17_18240"
     CDS             complement(1326..1805)
                     /locus_tag="VLJ17_18240"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HSV24959.1"
                     /translation="MTQHPDTDLDNTLQLETSKGPVTILMRPDLAPGHVARIKELVRD
                     GFYDGLKFHRVIDGFMAQTGCPHGTGTGGSGQKLKAEFSKEKHARGTVSMARSQNPDS
                     GDSQFFICFDDAKWLDGQYTVWGKVTAGMENVDRIKRGEPVSDPDTIIMARMAADAR"
     gene            complement(1789..2274)
                     /locus_tag="VLJ17_18245"
     CDS             complement(1789..2274)
                     /locus_tag="VLJ17_18245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24960.1"
                     /translation="MIRVLPNGHQAVLAALVCACLSAGVTLGSTQNLAQVDPPPSPPL
                     DRPKLANRLSEIGPLLSRCLQMPDYDIAQPGMQITVRLAFTRDGQILGEPRFTFSSPG
                     VSPEVRAVYQRAVVDMLNRCTPLPITKELGEAIAGRPFVIPIVETRKEKKADITHDPA
                     S"
     gene            complement(2275..3078)
                     /locus_tag="VLJ17_18250"
     CDS             complement(2275..3078)
                     /locus_tag="VLJ17_18250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24961.1"
                     /translation="MKHDLLILVGGHSHMGRGSPPATGGRSARASRPIGGDSRASAAP
                     PSPFRGGWLRAIAVVSAAAATFAIGSTAAPDQAHAVCSVLSRHPCTPYFGSVLSRHPF
                     TPYSCGVFSRPGCTPDVELPLNQVPVLKVEGHVGPSEPLDRDHPANRLNELGPLLSKC
                     LELPPDDEAQAGMRVTLKLAFKRNGELLAEPRFTYTTREASAEVKAAYRDAAMNMLKR
                     CTPLPVSEELGGAIAGRPFVVPIKETRNEARTGGPGNAKPADSPTEGRP"
     gene            complement(3075..3635)
                     /locus_tag="VLJ17_18255"
     CDS             complement(3075..3635)
                     /locus_tag="VLJ17_18255"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HSV24962.1"
                     /translation="MLRLIAVCALLAGFALSAAAPAAAQAIPAGADPQNTLVIDTTQG
                     RIVIKLRNDIAPQHATRLKQLARDKFYDGVPFHRVIAGFMAQTGDGQNGNGTGGSKYP
                     DLKAEFSQVPFKRGIVGMARKGGNNDSANCQFFIMYADGAFLNGQYTVIGEVLSGMDV
                     VDKIKKGEPVQDPDRMVTVRVAADVK"
     gene            complement(3666..4172)
                     /gene="coaD"
                     /locus_tag="VLJ17_18260"
     CDS             complement(3666..4172)
                     /gene="coaD"
                     /locus_tag="VLJ17_18260"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004595 - pantetheine-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HSV24963.1"
                     /translation="MQIALYPGSFDPVTNGHVDVVRHAARLVSRLVIAIGVHPGKAPL
                     FSVDDRVAMLEETCGVMVRETGCEFSCITFGDLAVSTARRVGATIIIRGLRDGSDLDY
                     EMQMAGMNAAMAPEVQTVFLPASPPVRPITATLVRQIAGMGGDVSAFVPAVVVDRLKK
                     KFAKKIGT"
BASE COUNT          884 a         1352 c         1380 g          856 t
ORIGIN      
        1 cctcctcgcc gaaccgcacc acgtcgccag ggttgagctt gcgggcgggc ttcaccagcg
       61 cccgccagcg cgacccgtcg agccgccgga tcagtgttgc ctcgatcctg ggcgcgctcg
      121 caccgccgat gcgccagccg gaaagctgcg ccgggatcac tttggtgtcg ttgacgacaa
      181 gctggtcacc cggactcagg agagcgggaa ggtcgcgaac gacgcgatct tcgagcaacg
      241 ggtcgtgtcc cggccgcacc acgaggagcc gcgccgagtc gcgcggcgac gctggccgca
      301 acgcgacgcg atccggcggc aaatcgaagt cgaagaggtc ggtacgcatg gattggcggc
      361 tccgttcctt tgcagggcaa ccaaacggag gtcactcccc ggaggctgtg aagcaatttg
      421 caatcatccc agggtgcgcc cgcgagggcg cgtcccaagg gatggcagcg attcaatcaa
      481 aaatgtgtca gctacgtccc cgaacgggtg tcagccgtct cccggatcaa agcatcaagc
      541 ccgacgaaga cagcatagcc gcgagggggc cccgaacatt tggagaggca gttaattgtt
      601 ttgttgggca ttgtgaaagg ccttgctcag ctgtttgtca tacccgccag caccggcgac
      661 aatgaacggt acctgttcct tctcgtgcag cggcgccgca agtatggctc gtagaaatcc
      721 ggccagtaat tggcgctttc gccatcgtaa tagacgatgt ctcccaaatg atagaaaacg
      781 atggcatgtc cgcggcggtc ggagcgtgtt gaagtcactc catgaaacgc gcgacggctt
      841 cgatataagt cggcgtattt accccgccgg tatcgccgac cgcatgaaac accaacttct
      901 tgttcttggt gatcttcgct atcgcgttct tatcgaggat cgatgcgaga tccatggcgt
      961 acggcggcaa gccggtcgcg ggaggcagat cacgccacag ctgcggcgat gtttgtcggg
     1021 accgataatc gtgtgaaatg ccagcggatc gggaacgatg tccatgtttg gattgggtag
     1081 gttgtgacga tgagcttgta aattgtttac ggtgacgatt gtggctgtac tgaatgctgc
     1141 catgctgatt cctctttccc gtcaaaaggt tagcaacatc atacttagtt gaggtggcaa
     1201 acatatcgcg atacaatcca caagctcagg cttgcaggga gccaccgcac ctgaatcgcg
     1261 caagtgcggt gcgagcttaa gaagccgcag caatttcatc tcaacgccta taaggtggcc
     1321 gcgccctacc tcgcatccgc cgccatgcgg gccatgatga tggtgtcggg atcggacacc
     1381 ggctcgccgc gcttgatccg gtcgacgttt tccattccgg ccgtcacttt accccaaacc
     1441 gtgtattgac catcgagcca cttcgcgtcg tcaaagcaga taaagaactg gctgtcgccg
     1501 gaatccggat tttgcgaccg agccattgag acggtaccgc gcgcgtgctt ctccttggag
     1561 aactcggcct tgagcttttg acccgagccg ccggttcctg tgccgtgcgg acagccggtc
     1621 tgcgccataa acccgtcgat gacgcggtga aacttgagcc cgtcatagaa gccgtcgcgc
     1681 accagttcct tgatgcgggc gacatggccg ggggcgagat caggccgcat caggatggtc
     1741 accgggccct tggaggtttc tagctgcaat gtgttgtcga gatcggtgtc aggatgctgg
     1801 gtcatgcgta atatcagctt tcttttcctt gcgggtttcg acgatcggga tcacgaaggg
     1861 gcgccccgcg atggcttcgc caagctcctt ggtgatgggc agcggggtgc aacgattgag
     1921 catatccacg accgcccgct gatataccgc ccgaacctct ggggaaaccc cgggcgagct
     1981 aaacgtgaac cgcggctcgc cgagaatttg cccatcgcgg gtaaaggcaa gccgcaccgt
     2041 gatctgcatg cctggctgcg caatgtcgta gtcgggcatc tgtaggcacc gcgacagcaa
     2101 tggaccgatt tcgctcagcc ggttggcgag ctttggccga tcgaggggcg ggctgggcgg
     2161 cggatcgacc tgcgccaagt tctgtgtaga gccaagcgtc acaccggctg acaggcaggc
     2221 gcaaaccagc gcagcgagca ctgcttggtg cccgtttggc agaacccgaa tcatctatgg
     2281 ccggccctcg gtcggactgt cggcgggttt cgcattaccg ggaccgccag tcctggcttc
     2341 gttacgggtt tccttgatcg ggacgacgaa gggacgcccc gcgatggcac cgccaagctc
     2401 ctcgctgacc ggcagcggcg tgcagcgctt gagcatgttc atggcggcat cgcggtaagc
     2461 ggctttcacc tccgcggacg cctcgcgggt ggtgtaggtg aaacgcggct cggccaaaag
     2521 ctcgccatta cgcttgaacg cgagtttgag cgtaacccgc atgccggcct gcgcctcgtc
     2581 atcgggcggt agttccaagc acttggacaa caacggcccc agctcattga gccggttggc
     2641 tggatggtcg cggtcgagcg gctcggaggg gcccacatgc ccctccacct tcaacaccgg
     2701 gacttggttt agcggaagct cgacatcagg tgtgcagcct ggccggctga aaacgccaca
     2761 ggaatacggc gtgaacggat ggcgactaag cacgctgccg aaatacggcg tgcacggatg
     2821 acggctgagc acgctgcaca ccgcgtgcgc ctgatcgggc gctgctgtcg atccgatcgc
     2881 gaacgtcgca gccgccgccg aaacaacggc aatagcgcgt aaccaccctc ccctgaacgg
     2941 agagggtggg gcggcggatg cgcggctgtc accccctatc ggcctgctgg cgcgggccga
     3001 cctcccccct gtagcgggag gtgaaccgcg ccccatatgc gaatgtcccc ccactaaaat
     3061 gaggaggtcg tgcttcattt gacgtccgcc gctactcgaa ccgtgaccat gcggtcggga
     3121 tcctggaccg gctcgccctt cttgatcttg tcgacgacat ccatgccgga caggacctcg
     3181 ccgatgacgg tgtactggcc gttgaggaaa gcaccgtccg catacatgat gaagaactgg
     3241 cagttggcgg aatcgttgtt gccccccttc cgggccatgc cgacgatacc gcgcttgaac
     3301 ggcacctgag agaactccgc cttcaggtcg gggtacttcg agccgccagt gccgttaccg
     3361 ttttggccgt cgccggtctg cgccatgaat ccagcgatta cccgatgaaa cggcacaccg
     3421 tcatagaact tatcgcgcgc gagttgcttg aggcgagtgg catgctgcgg agcgatatcg
     3481 ttgcgcagct tgatcacgat gcggccctgg gtggtgtcga tcaccagtgt attttgtgga
     3541 tcggcgcccg ccggtatcgc ctgggcggcg gcaggtgcgg cggcagataa ggcaaagcca
     3601 gcaagcaagg cacaaacagc gatcaagcgt aacatgagag cttcctttta cgtcggtgtt
     3661 ttctcttacg ttccgatttt cttggcgaat ttctttttga gccggtccac aacaactgcc
     3721 ggcacgaagg ccgatacatc gccgcccatt ccggcaatct gccggaccaa agtggcggtg
     3781 atgggacgca ccggcggcga cgccggcagg aacacggttt gcacctcggg cgccatcgcg
     3841 gcattcatcc cggccatctg catctcgtag tcaagatcgc tgccgtcgcg cagacctcgg
     3901 atgatgatgg tagcaccaac ccgccgggca gtcgaaaccg cgagatcgcc gaaagtgatg
     3961 cagctaaatt cgcagcccgt ctcacgcacc atgacaccac aggtctcctc cagcatcgcg
     4021 acgcgatcat cgaccgaaaa cagcggcgcc ttgccggggt gaaccccgat ggcgatcacc
     4081 agccggctga ccagccgggc ggcgtggcgc accacatcaa cgtggccatt ggtgactgga
     4141 tcgaacgaac ctggatagag ggcaatttgc attggcagga tctagcccgc tgttccgcct
     4201 cctgcaaggc ggtgttcgct ctatggcggt gctcgacgaa tcccccatca cgggcgcaag
     4261 caggctcgcg caatggcgtt gactagttca tcgattccat gaaacggatc agtaggatgg
     4321 gttaagatcc tatgcaggcg cggcgggagg ggtgcgctac taaatcggtt tacctccacc
     4381 acccgcctgg ggagcgtgat gaaagccgcc gacaaacaca gcttctgcct gaaacgcaaa
     4441 atcgccgcct gggacgacga cttcctcgca ag
//
LOCUS       DATILV010000760         2242 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2226881, whole genome shotgun sequence.
ACCESSION   DATILV010000760 DATILV010000000
VERSION     DATILV010000760.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2242
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2226881"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(63..1181)
                     /locus_tag="VLJ17_18265"
     CDS             complement(63..1181)
                     /locus_tag="VLJ17_18265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010687199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-alpha-hydroxyglycine alpha-amidating
                     lyase family protein"
                     /protein_id="HSV24964.1"
                     /translation="MMHRWLLGLSAALVAPAALPAWAQDAVPQIPYESVPNFLKMPTD
                     THLGEATGVAVNSKGHVFVYSRSGSSLGPAYGNAASQLLEFDGNGKFIREIGKNLYAW
                     SFGHTVRVDKDDNIWATDKGSDMIVKFNKDGRVMMVFGRKSESSDEDAHPLHRPNPPL
                     PAIDGRFRQPTDVTWDPEGNTYISDGYINSRVAKVDKNGSWVKQWGSKGSEPGQFNTV
                     HSIAADAKGNIYAADRTNRRIQVFDGEGKLQNIIKIDVPYDPDAKPAIGNKPNLAQCA
                     TEGGTFCPGAPWALCITPGPNQVLYSADSHPGRIYKLTLDGKVLGVLGESGKQLKQFG
                     WVHEIACPSENVLFVAEILNWRIQKLILHPDHVKSASR"
     gene            1422..>2242
                     /locus_tag="VLJ17_18270"
     CDS             1422..>2242
                     /locus_tag="VLJ17_18270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011442505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HSV24965.1"
                     /translation="MKKTYRVAVIPGDGIGKEVTPEGVRALEQAAKKHGFALKLDWFD
                     FACIEYFEKHGRMMPEDWKQQIGSHDAIFFGAVGWPAKIPDHLSLWGSLVTWRREFDQ
                     YVNLRPVRLMPGVACPLANRNPGDIDFYVVRENTEGEYSNVGGRMFANTEREFVVQET
                     YMTRIGVDRVVKFAFELARTRPRKHLTSATKSNGISITMPYWDERVEAMAKAFPDVRW
                     DKYHIDILTANFVLHPDWFDVVVGSNLFGDILSDLGPACTGTIGIAPSGNINPEG"
BASE COUNT          416 a          654 c          708 g          464 t
ORIGIN      
        1 aaattgtgaa aaaactgccg gcgcgggtcg cgccggcagt cgatcgcgga acgaaaactt
       61 cgtcagcggc tggccgattt tacgtgatcc ggatgcagga tcaacttctg gatgcgccag
      121 ttgaggattt cggcgacgaa cagcacgttt tcggacgggc atgcgatttc gtgaacccat
      181 ccgaattgct tgagctgctt gccggactcg ccgagcaccc ccaacacctt gccgtcaagg
      241 gtaagcttgt agattcggcc ggggtgggag tctgcgctat agagcacctg gttcggtccg
      301 ggcgtgatgc agagcgccca cggcgcgccc gggcagaagg tgccgccttc ggtcgcgcat
      361 tgggcgaggt tgggcttgtt gccgatggcg ggctttgcgt caggatcgta cggaacgtcg
      421 atcttgatga tgttttgaag cttgccctcg ccgtcgaaca cctggatgcg ccggttggtg
      481 cggtcggccg catagatgtt gcccttggcg tctgcggcga tcgagtgcac cgtattgaac
      541 tggccgggct cggagccctt tgagccccat tgcttgaccc aactgccgtt cttgtcgacc
      601 ttggcgacgc gggaattgat gtagccgtcg ctgatatagg tgttgccctc gggatcccat
      661 gtgacatcgg tcggctggcg gaagcggccg tcgatggcgg gcaacggcgg attgggccgg
      721 tgcaatggat gggcgtcttc atcggaggac tccgatttgc gaccgaacac catcatcacc
      781 cgtccatcct tgttgaattt gacgatcatg tccgaaccct tgtcagtggc ccagatgttg
      841 tcgtccttgt cgacgcgcac cgtatggccg aacgaccagg cgtagagatt cttgccgatc
      901 tcgcggatga acttgccgtt gccgtcgaac tcgaggagct gggaggcggc gttgccatat
      961 gctgggccga ggctggatcc gctgcgcgag tagacaaaaa cgtggccctt cgaattgacc
     1021 gccacgccgg tagcctcgcc gaggtgagta tccgtcggca ttttcaggaa gttcggaacg
     1081 gactcgtatg ggatttgcgg aacggcgtcc tgcgcccagg cgggcagtgc cgcgggcgca
     1141 accagcgctg ccgaaagacc cagcaaccag cgatgcatca tgttctcctc cttgccacga
     1201 ctttagtggg tttctttaac gtcccgacgg ccacttagag ccgatcccac atggtagctc
     1261 ctgtgcgacg cctttgatag cgctcattgg gagacgggct tgcttgcacg gagctcatcg
     1321 gccagatttg catcgcggcg caagtgtgag aatcagcgca ccagccattt cgccctgcga
     1381 ctgggtctga tatcagggcc attcggtcaa ggagctctga catgaagaaa acctatcgcg
     1441 ttgccgtcat accgggcgat ggcatcggca aggaagtgac gcccgagggc gtgcgcgccc
     1501 ttgagcaggc cgccaagaaa cacggttttg cgctcaagct cgattggttc gactttgcct
     1561 gtatcgaata tttcgaaaag catggccgca tgatgccgga ggattggaag cagcaaatcg
     1621 gcagccatga cgcgatcttt ttcggcgccg tcggctggcc cgccaagatc cccgaccacc
     1681 tctccctctg gggctcgctg gtgacgtggc ggcgcgagtt cgatcaatac gtcaatctgc
     1741 ggccggtgcg gctgatgccg ggggtcgctt gcccgcttgc caaccgcaat ccgggtgaca
     1801 tcgacttcta tgtggtgcgc gagaacaccg agggcgaata ttccaatgtc ggcggacgca
     1861 tgttcgccaa taccgagcgg gaattcgtgg tccaggagac ctacatgacc cggatcgggg
     1921 tcgaccgcgt ggtgaaattc gccttcgagc tggcgcgcac gcggccgcgg aagcacctca
     1981 cttcggcgac gaagtccaac ggcatttcca tcaccatgcc gtactgggac gagcgagtcg
     2041 aggcgatggc gaaagcgttt ccggacgtgc gctgggacaa atatcacatc gacattctca
     2101 ccgcgaactt cgtgctgcac cccgactggt tcgatgtcgt ggtcggctcc aacctgttcg
     2161 gcgatatcct gtccgacctc ggacccgcct gcaccgggac catcggcatt gcgccgagcg
     2221 gcaacatcaa tccggaaggc ca
//
LOCUS       DATILV010000761        10249 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2995681, whole genome shotgun sequence.
ACCESSION   DATILV010000761 DATILV010000000
VERSION     DATILV010000761.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10249)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10249)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10249
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2995681"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..823)
                     /locus_tag="VLJ17_18275"
     CDS             complement(<1..823)
                     /locus_tag="VLJ17_18275"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV24966.1"
                     /translation="MFAASDPGALFPPCACHSAGLRRRQSTRRDFLARGLACVAVGGG
                     LSGIDVSSPARAAEKPVSPARRLLIDVHHHFLPPKYIAEEHERQSLQHGSLSPTQLRS
                     WSPQRTLETMDEYGIATAVASVSTPGVWFGDVAAGRRLSRAWNEYAAEQIKTYPGRFG
                     LFAVIPLPDTEGSLREIEYALDVLKADGLALMTSYDGKYLGDAAFAPVLREADRRKAA
                     VFVHPTVAACCGSVLPGILPQSVEYPFDTTRTLVSLLTSGSIVSFPDIKWIFSHGG"
     gene            complement(943..2001)
                     /locus_tag="VLJ17_18280"
     CDS             complement(943..2001)
                     /locus_tag="VLJ17_18280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSV24967.1"
                     /translation="MELFRTLSVLALLVPTVAAAADYPTPKQGEWIARDFKFHTGEVM
                     PEVKLHYTTVGEPTGAPVIALHGTGGSADGMLTPTFAGELFGPGQPLDATKHYIIIPD
                     ALGHGRSSKPSDGLKAKFPQYNYTDMVDAQYRLLSEGLGIRHVRLIIGNSMGGMNVWV
                     WGERYPGYMDALVPMASQPTAMASRNWMLRRMMLETVRKDPDYNNGNYVTQPRALKYA
                     TIFFAIATAGGTLNYQRQAPTRELADKIVDARLAAPMVADANDFLWQWGSSADYDAAP
                     GLEKIQAWLLAINSADDERNPPETGIEVEAMKRVKNGKLYLIPASEESSGHLTTGNAK
                     FYKQQLQEFLQIVPRQAM"
     gene            complement(2444..3598)
                     /locus_tag="VLJ17_18285"
     CDS             complement(2444..3598)
                     /locus_tag="VLJ17_18285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV24968.1"
                     /translation="MLRMIFGITLSALSFSAFAQEPLKIGLVQSMTGPFNTVGKAVVN
                     GARLYMQQHGDMVAGRKIQIILKDDTTSPEIAKRVAQELIVNDKVAIIGAGITPSALT
                     IAPLVTEAKIATVVMVSGASITVDRSPYMVRTGFTLGQSSSVIADWAVQNGTKKIATI
                     VNDWAPGLEAEAAFKDRISKSSIQIMESMRVPLANPDFAPFLQRARDLGPDTIFAYFP
                     GNQSGIFAKQFVERGMDKSGIRLIGPGDLTDDDELPSMTDAMLGIITALHYSALHDSA
                     LNKAYVKDFEAAYGKRPNFVSLGGYDGMHLIYEALKKTGGKTDGDAMLAAMKGMNWES
                     PRGPMSIDPETRDVVHNEYIRRVEKVNGQLYNVEFATIEAVKDPVRGAKK"
     gene            complement(3614..4555)
                     /locus_tag="VLJ17_18290"
     CDS             complement(3614..4555)
                     /locus_tag="VLJ17_18290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015886715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0018576 - catechol 1,2-dioxygenase
                     activity [Evidence IEA];
                     GO_process: GO:0009712 - catechol-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dioxygenase"
                     /protein_id="HSV24969.1"
                     /translation="MIIRTQEDVTPAVLSEIARAPDPRFREIMSALVRHLHAFAREVK
                     LTEAEYQAAASYIVAIGQKSSESHNEAILMGGALGLSTLVCLLNNGNNGATETTANLL
                     GPFWRADSPATANGASIVRSPTPGEPIFVNAWIKDPQGQPVAGVEVDVWHSSTEGYYE
                     NQDPVQADMNLRGKFRSDADGHIAFRSIKPVGYPIPVDGPVGDLLRAQKRANMRPAHL
                     HFLIYKPGFKTHISQVYTDDDPHLETDSQFGVTRALIGHYVRHDTGPAPAPDVKGPWY
                     SLDCTFGIEPGVAKWPRPPISGKARGERPEIERLKRA"
     gene            4761..5975
                     /locus_tag="VLJ17_18295"
     CDS             4761..5975
                     /locus_tag="VLJ17_18295"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSV24970.1"
                     /translation="MSTLASPPPSPSAPVNAREAMEQLNAEAGKFNIWLRTQANAPAQ
                     RPWFRDTDIEAGGKVAGGRVGANQIKAAPHRWRWCEISPYLDRIAEIARNSDVSPIEF
                     AERQQFLLTNPGLGGRLQVTNTIRCAVSIYNPGDVAPTHVHTPNASRTILSENGGYTV
                     VEGERCEAERGDLILTPHGTWHDHGNDGAAPVIWIDVLDFPLMEFLDCVWLDDEFHGE
                     RIGNSRAQAPKLIDAYSHKLYGTGGMLPGFVSHQRGISRHATPMIHYRGAEVRNALAG
                     LAKEPGDPYEGITLAFVNPVNGAPVFPTLSYAAQLLRPGEETRLKRETASTMYVVIEG
                     SGATEVAGHRFAWERNDIFVVPNFLWRRHINTGGADAVLYSVSDAPLMEKIGQYRVQG
                     RGRDGVVEDLVA"
     gene            6050..7162
                     /locus_tag="VLJ17_18300"
     CDS             6050..7162
                     /locus_tag="VLJ17_18300"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSV24971.1"
                     /translation="MKRAFKVVAGAALWLTGILTSATLGPSLAQSNAQNLQIYWIDVE
                     GGAATLIVSPSGESLLIDTGYPDGDRDAKRIFAAAQKAGLKQIDYLVISHWHRDHEGG
                     LAALAKMIPIGRLFDHGDGVDPVDKVRLDDYRAVAGDKRTIVKPGDKIPLKGADVLVV
                     SSEFTLLPQPVNGGGPNPLCADAAQMGPAGNENQRMVGVLVTFGAFTFLDLADLDWQK
                     EMELSCPLNKVGRVSLYQTSRHGSLDGAGAPAFLGAISPQVIVVNNGPRKGLGQTDDR
                     IKPLETPGKPTAPYEKNSYLRMAKLPGIEGIWQGHLSLLDKDPNHNTSPDMIANFEET
                     AECQGNLINASVAPDGKFTLTNGRNGFNKTYVARGK"
     gene            complement(7663..8529)
                     /locus_tag="VLJ17_18305"
     CDS             complement(7663..8529)
                     /locus_tag="VLJ17_18305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24972.1"
                     /translation="MHQRNLIGAIVVATLTLPVAGVPAASGAKYPDWKGAWARFVVPN
                     LGGQPSHDQTKPWGFGQQAPLTPEYQKVLEDSLADQANGGEGNFFDHAIRCLPGGMPL
                     NMIAFRPLEFVVTPETTYVLVGGSEHFRRIFTDGRDWPKDIEPTYAGYSIGKWIDSDG
                     GGTYDTLEVETRGPFKGPRAYDATGLPLHFDNQSTFLERFYRDKADPNILHDQMTVLD
                     HALTRPWTVDKRYVLDPSPRPEWPEAYCTENPSMIAIGKESYFLSGDGMLMPVRKDQP
                     PPDLRYFKQTKK"
     gene            8822..9115
                     /locus_tag="VLJ17_18310"
     CDS             8822..9115
                     /locus_tag="VLJ17_18310"
                     /inference="COORDINATES: protein motif:HMM:NF023494.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3551 domain-containing protein"
                     /protein_id="HSV24973.1"
                     /translation="MIRMSIIALLVIAAALLSETLASNAQSAYSYPWCAIYGGGESGG
                     GGGATSCYFTSWQQCMTTLSGIGGLCVGSPYYHAQPTPPPHRASAKLRRRPQA"
     gene            9166..9420
                     /locus_tag="VLJ17_18315"
     CDS             9166..9420
                     /locus_tag="VLJ17_18315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24974.1"
                     /translation="MLQDDRIRLAVAEETTRWHRVAAVKAVREVHRILNDPEARDVDK
                     LRAADCLLVRLNPIITGHVMRIEHTTNTASKIPRNRRWMR"
BASE COUNT         2020 a         3122 c         3072 g         2035 t
ORIGIN      
        1 cgccgccatg agagaagatc catttgatat ccgggaagct cacgatcgag ccgctggtga
       61 gaaggctaac caaggtgcgc gtggtatcaa aaggatattc caccgactgc gggagaatgc
      121 cgggcagcac gctgccgcaa caagccgcga cggtcggatg cacgaacacc gctgctttgc
      181 gacggtccgc ctcccgcagc accggcgcaa atgcggcgtc gcccagatat ttgccgtcat
      241 aggatgtcat cagcgccagc ccgtcggctt tcaagacgtc gagcgcgtat tcgatttcgc
      301 gcaggctgcc ctcggtgtcc ggcaacggaa tgacagcgaa aaggccgaag cggcccggat
      361 aggtcttgat ctgctcggcg gcatattcgt tccatgcgcg agagagccgg cggcctgccg
      421 cgacgtcgcc gaaccaaacg ccgggggtcg aaaccgatgc gaccgcggtg gcaatgccgt
      481 attcatccat ggtttcgagc gtgcgttgcg gcgaccatga cctcagctgc gtgggcgaca
      541 agctgccatg ttgtaagctc tggcgctcat gctcctctgc gatgtatttc ggtggcagga
      601 agtggtggtg cacgtcgatg agcaaacgcc gcgccgggct cacgggcttt tccgcggccc
      661 gtgcgggcga tgaaacatcg atcccggaca gccctccgcc gaccgccacg caggcaagac
      721 cgcgtgccag aaaatcgcgg cgtgtcgact gtcgtcggcg caagccggcc gaatggcagg
      781 cgcacggagg gaacagcgcc ccgggatcag atgctgcaaa catggcgacc tcctcttgtc
      841 ctcgctggca agcacgacga cactttgcag ccagtgacgt gatcggccaa aatcgtcact
      901 agatccagga cgtgacctta tcgcgcagaa ggcgccgccg aactacatcg cctgccgcgg
      961 cactatttgc agaaattctt gaagctgctg cttgtagaat tttgcgttac cggttgtgag
     1021 atgtccgctg gactcctcgc tcgctgggat aagatacagc ttaccgttct tcacgcgttt
     1081 catagcctcc acctcgatgc cggtttccgg cggattgcgt tcatcgtcgg cggaattgat
     1141 agcaaggagc catgcctgga ttttctcgag cccgggggca gcatcgtaat cagcagatga
     1201 gccccattgc cacaagaagt cgttggcgtc ggcgaccatg ggggcggcga gacgggcatc
     1261 cacgatcttg tcggccagct cgcgtgtcgg cgcttgcctt tggtagttga gtgtaccgcc
     1321 ggcggtcgcg atcgcgaaga atatagtggc gtacttcaat gcacgaggct gggtaacgta
     1381 gttgccattg ttatagtccg gatccttgcg gacggtctcc agcatcatcc gccgcagcat
     1441 ccagttgcgg ctcgccatcg ccgttggctg tgaggccatc ggcaccagcg cgtccatgta
     1501 accagggtat ctctcacccc aaacccagac attcatcccg cccatcgagt tgccaatgat
     1561 gagccgcaca tggcggatgc cgagaccttc cgatagcagc ctatattgcg cgtccaccat
     1621 atcggtgtag ttgtactgcg ggaatttcgc cttcaggcca tccgagggct tggagctcct
     1681 accgtgcccc agtgcgtcgg ggatgatgat gtaatgcttg gtcgcatcaa gcggctggcc
     1741 gggaccaaac agttcacccg cgaaggttgg cgtgagcatg ccgtccgccg agccgccagt
     1801 cccgtgcagc gcaatgaccg gtgctccggt cggctcgccg acggtcgtgt agtgcagttt
     1861 gacttccggc attacctcgc cggtgtgaaa cttgaaatcc cgcgcaatcc actcgccctg
     1921 ctttggcgtg ggataatcag ccgccgccgc aacagtgggc actagcaacg cgagcacgct
     1981 aagtgttctg aaaagctcca tggtgtgtcc tcccagagtc gcggtggttc gtgccacgcg
     2041 tcaattccag tctatacaat ggacgcaagg gtgtattccc cgctaccaag gcgtttaaca
     2101 atgttccgaa gtgtttatag gactttgatt gcgattatat aggcctatta cgacggcttc
     2161 agactccttc gaacgaatac cttcggtgag cggtggacct cagatagtcg ctgactatgt
     2221 cgtgctgtcg gcagtacaat tgtttgtcgt cctgcttgag cagcattaga tcgacgccct
     2281 ggccgaccca ctcaatttgc gtgcttatca aacggtgcgc caactctggg gtgtcctgcc
     2341 aagtttgcgc agtgcttgag ttctgcgaga tgtcgcccaa tctgctccat caactcgaca
     2401 cggctacgag cattccgcgc caagggatac cggccgccag ctcctacttc ttcgcccccc
     2461 tcaccggatc cttgacggcc tcgatggtgg cgaattccac attgtacagc tgcccgttca
     2521 ccttctcgac cctgcgaata tattcgttat gcaccacatc gcgcgtctcc ggatcgatcg
     2581 acattggccc gcgcgggctt tcccaattca tgcccttcat cgcggccagc atggcgtcgc
     2641 cgtcggtctt gccgccggtc ttcttcagtg cctcgtagat caggtgcatg ccatcatagc
     2701 cgccgagcga gacgaagttc gggcgcttgc cgtaggcggc ctcgaaatcc ttgacatagg
     2761 ccttgttcag ggctgagtcg tgcaacgccg agtaatgcag cgccgtgatg atgccgagca
     2821 tggcgtcggt catgcttggc aattcgtcat cgtcggttag gtcgcccgga ccaatcaacc
     2881 ggatacccga tttatccata ccgcgttcga cgaattgctt ggcgaagatg cccgactggt
     2941 tgcccgggaa ataggcgaag atggtgtcgg gaccgaggtc gcgcgcacgc tgcaagaacg
     3001 gcgcaaaatc cggattggcg agcggaaccc gcatcgattc cataatctgt atgctgctct
     3061 tcgaaatgcg gtccttgaat gccgcttcgg cctccagtcc gggcgcccag tcgttgacga
     3121 tggtcgcgat tttcttggtt ccgttttgca cggcccagtc ggcaatgacc gaggaagatt
     3181 gaccgagcgt aaagcccgtt cgcaccatgt agggcgagcg gtccactgtg atcgacgcgc
     3241 ccgacaccat gaccacggtc gcgatcttcg cctcggtcac cagcggcgcg atagtcagcg
     3301 cggacggcgt aatgccggcg ccgatgatcg caaccttgtc gttgacgatg agttcctgcg
     3361 ccacgcgctt tgcgatctcc ggtgaggtgg tgtcgtcctt aaggatgatc tgaatcttgc
     3421 ggcccgccac catgtcgcca tgctgctgca tgtagagccg agcgccgttg acgacggcct
     3481 tgccgacggt gttgaacggg cccgtcatcg actgcacgag cccgattttg agtggctcct
     3541 gggcaaaggc gctaaacgac agagccgaca gagtaatgcc gaaaatcatt cgtaacatat
     3601 gctttctccc gtatcacgcc cgcttcaatc gttcgatctc cggccgttcg ccgcgggcct
     3661 tgccgctgat cggcgggcgc ggccatttcg caacgccggg ctcgatgccg aaggtgcagt
     3721 cgagcgaata ccacgggcct ttgacgtcgg gtgcgggtgc cggcccggtg tcgtggcgaa
     3781 cgtagtgccc gatcagggca cgggtcacgc cgaactggga gtccgtttcc aggtgcgggt
     3841 cgtcgtcggt gtagacctgg gagatgtgcg tcttgaagcc gggcttgtag atcaggaaat
     3901 gcaaatgcgc cgggcgcatg ttggcacgct tctgggcgcg caacagatcg cccaccggcc
     3961 cgtctacggg tatcggatag ccgaccggct tgatgctacg gaacgcgatg tggccgtcgg
     4021 catcagacct gaacttgccg cgcagattca tatcggcttg caccgggtcc tggttctcat
     4081 aatagccttc ggtagaagaa tgccagacat cgacttcgac gccggcaacc ggctggcctt
     4141 gtgggtcctt gatccaggca ttaacgaaaa tcggctcacc cggcgtcggc gatcgcacga
     4201 tcgaagcgcc gttcgcggtc gcgggcgaat ccgcacgcca gaatggaccg agcagattcg
     4261 cggtggtctc ggtggcaccg ttgttgccgt tgttgagaag gcagacgaga gtcgaaagac
     4321 ccagcgcccc acccatcagt attgcctcgt tgtggctctc actcgatttc tgaccaatcg
     4381 ccacgatgta gctcgcagcg gcctggtact ccgcctcggt cagctttacc tcgcgggcaa
     4441 aggcatgaag atggcggacg agcgccgaca tgatttcccg gaagcgcgga tcgggcgcgc
     4501 gagcgatctc gctcagcacg gccggagtca cgtcttcctg ggtgcggatg atcattctct
     4561 tctcccttgg gggcgtcgtc ccagccgcac catagcaccg gttgaatttc cgccaaatcg
     4621 gcgcaaagtg cttcctctcc ctccccgtct tcgggagggt cggggtggag actttggcac
     4681 agccgtgccg gtggtcgcgc cacccggcgc ttcgcgccgc cttcccgaaa atgggaggga
     4741 gagaacccgg aggaagtcct ttgtccactc ttgcaagtcc gcccccctcc ccttccgcac
     4801 cggtcaatgc gcgcgaggcc atggagcagc tcaacgccga agccggcaag ttcaacatct
     4861 ggctgcggac ccaggcgaat gcgcccgccc agcggccgtg gttccgcgac accgacatcg
     4921 aggccggcgg caaggttgcg ggcggccggg tcggcgccaa ccagatcaag gccgcgccgc
     4981 accgctggcg gtggtgcgag atcagtccct atctcgaccg catcgccgag atcgcgcgca
     5041 attccgacgt gtcgccgatc gaattcgcag agcgccagca gttcctgctc accaacccgg
     5101 gactcggcgg aagactgcag gtcaccaaca ccatccggtg cgcggtctcg atctacaatc
     5161 caggcgacgt ggcgccgacg cacgtccaca cgcccaacgc aagccgcacc atcctgtccg
     5221 aaaacggggg ctatacagtt gtcgagggcg agcgctgcga ggcggagcgc ggcgatctca
     5281 tcctcacgcc ccacggcact tggcacgatc acggcaacga cggcgcggcc ccagtgatct
     5341 ggatcgacgt gctcgatttc ccgctcatgg agttcctcga ctgcgtttgg ctcgacgatg
     5401 agtttcacgg cgagcgtatc ggcaacagcc gcgcccaagc gccgaagctc atcgacgctt
     5461 actcgcacaa gctctacggt accggcggca tgttgccggg ctttgtctcg caccagcgcg
     5521 gcatctcccg ccatgcgacc ccgatgatcc actaccgcgg cgccgaggtc cgcaacgcgc
     5581 tcgctggcct cgccaaggag cccggcgatc cttacgaggg aatcaccctc gccttcgtca
     5641 atccagtgaa tggcgccccg gtgtttccga cgctgtccta tgcggcgcaa ctgttgcggc
     5701 ccggcgagga aacgcgcctc aagcgcgaga ccgcgagcac catgtatgtg gtgatcgaag
     5761 gctcaggcgc caccgaagtc gccggccacc gcttcgcgtg ggaacgcaat gacatttttg
     5821 tcgtgccgaa ctttctgtgg cgacgtcaca tcaataccgg aggcgccgat gctgtgctct
     5881 actcggtctc cgacgcgccg ttgatggaga agatcgggca atatcgcgtc caagggcggg
     5941 gccgggacgg ggtagtggag gatttggtgg cgtagcgggc cgacctgtac ggttcgggcc
     6001 cgatcaatcc cgaccggcat aatcctggtc ggataaaagg gagacatcga tgaagcgagc
     6061 tttcaaagtt gtcgccggcg cggcgctgtg gctgacgggc attctgacgt cggcgacctt
     6121 gggtccctca ctggcccaga gcaacgcgca gaatctacag atttattgga tcgacgtcga
     6181 aggcggcgca gcaacgctga tcgtctcgcc gtcgggtgag tccttgctga tcgataccgg
     6241 atatccggat ggcgatcggg acgcgaaacg aatctttgcg gcggcgcaaa aggccggctt
     6301 gaagcagatc gattatctgg tcatcagcca ttggcaccgc gaccacgaag gcggtcttgc
     6361 ggcgctcgcc aagatgatcc cgatcggcag gctcttcgat cacggcgacg gggtcgatcc
     6421 ggtggataag gtgaggctcg acgactaccg tgccgtcgcc ggcgacaagc gcaccatcgt
     6481 caaacccggc gacaagattc ccctgaaggg cgccgatgtt ttggtggtgt cttcggaatt
     6541 cacgctgcta ccacagcccg tcaacggtgg cgggcctaat ccgctgtgcg ccgatgctgc
     6601 ccagatgggg ccggccggga atgagaatca gcgcatggtt ggcgtgcttg tgactttcgg
     6661 tgcgtttacg ttcctggacc tcgccgatct tgattggcaa aaggaaatgg aactgtcgtg
     6721 tccgctcaac aaggtgggac gggttagcct ttatcagacg agccgacacg gctcgctcga
     6781 cggtgctggc gcgccagcgt ttctcggcgc catcagcccc caggtcatcg tcgtgaataa
     6841 tggaccccgt aagggtctgg gccagaccga tgaccgcatc aagccgctgg aaactcccgg
     6901 caagccaact gctccttacg agaaaaattc gtatttgcga atggcaaagc ttcccggaat
     6961 cgaaggcatc tggcaggggc acctgtcatt actggacaag gacccgaacc acaatacgtc
     7021 gccggacatg atagcgaact tcgaagagac cgccgagtgc cagggcaact tgatcaatgc
     7081 gtcggtggcg ccggacggca agtttaccct caccaacggc cgcaatgggt tcaacaaaac
     7141 ttacgtggcg cggggaaaat agctcgagca gcaatgaggc gcggcgcgga aaggatcgcc
     7201 gaaaaggatg tggaaaggat agggccggcg aagtattcgt tccgcccgac cgcgccatca
     7261 atcgtcaaac gaaaatcttg aggttacggc cacagctcag ggttcaggtt aaccgagata
     7321 tttctgcggc tcgtgcgccg acgttgttcg cgcgcggcta tcttcttggc ccgctaaccg
     7381 ctcagctctg cgttccggtc cgccatggtt cgggtcatca tgggcgggac atgatcagca
     7441 tcgtttcctc acaaagggaa tgcgatgtcc acgactaatt taattattgt ggcgtcggcc
     7501 tttgcgctcg atgcagcagc acagagtgaa ggtaaagctc atgtaattct atcggtccgt
     7561 ggataaggtg agacccgacg acaccatgag gccagcaccg acggcaagcg caccatcgtc
     7621 acgctgggac aaagcacgga ccgccgttcc ggcgacgcgg ggtcacttct tcgtttgctt
     7681 gaaataacgc aaatccggtg gcggctggtc cttgcggacc ggcatcaaca tgccatcacc
     7741 actcaagaag tagctctcct taccgatcgc aatcatcgac gggttctcgg tgcaatatgc
     7801 ttcgggccat tcaggacggg gactgggatc gagcacatat cttttatcca cggtccacgg
     7861 ccgcgttaac gcatgatcga gcacggtcat ttggtcatga aggatgttcg gatcggcttt
     7921 gtcccggtag aaccgttcca agaaggtgga ctgattgtcg aaatggaggg ggagcccggt
     7981 ggcgtcgtag gcgcgaggcc ccttgaacgg gccgcgcgtt tcgacctcca gcgtgtcgta
     8041 ggtgccgccg ccgtcgctat cgatccattt tccgatcgag tagcccgcat aggttggttc
     8101 gatgtccttg ggccagtcgc gtccgtcagt gaagatgcga cggaagtgct ccgagccgcc
     8161 gaccaaaaca taagtggttt cgggggtgac gacaaattcc agcggtcgaa atgcgatcat
     8221 gttgagcggc atgcctcccg gtaagcatcg gatggcgtgg tcaaaaaaat tgccctcccc
     8281 accattggcc tgatccgcga ggctatcctc caggaccttt tgatactccg gggtcagcgg
     8341 cgcctgttgt ccaaatcccc aaggcttcgt ctggtcgtgc gacggctgcc ccccaaggtt
     8401 ggggaccacg aaccgcgccc acgcgccctt ccagtcggga tatttcgcac cactggctgc
     8461 cggaacaccg gcgaccggca gcgtcagcgt cgccacaacg attgcaccga tcaaattgcg
     8521 ttgatgcatg gaaacctccc ttcatggcac gcttgtgaga cgctcaccga ccatctcatg
     8581 ggcatacccg gctgcccttc cctatgtctc gcattttacc ttattttctt cgaccataca
     8641 tacaagcaat gtttgcacga atccgtgtgt gcatggatgg ccgtaacgcg tcccgcatcg
     8701 cgacggcggt cagcggcaat ccaagagcgg ccttgaggtg ggcccgcggc attccgcagc
     8761 ctccgcaaaa ctgataatat gaaaggcaag caaaaaacga cgaaagggag ggagggagac
     8821 aatgattcgc atgtcgatta tcgcattgct tgtcattgcc gctgcgttgc tgagcgaaac
     8881 gctggctagc aacgcgcaat cggcttattc ttatccatgg tgcgccatct acggaggtgg
     8941 cgagtctgga ggaggcggtg gtgccacgtc ctgctatttc acgagctggc agcagtgcat
     9001 gacaacgttg tccggcatcg gcggactctg cgtcggtagc ccgtattacc acgcgcagcc
     9061 aacaccgccg ccgcaccgtg cgtcggcgaa gctgcgccgt cgccctcaag cctgaggggc
     9121 ctttcgcgcg caaccgatca tacgtttgcc aacatcgccc ggagaatgtt gcaagacgat
     9181 cgcattcgac tcgcggtcgc cgaagaaact acgcgatggc accgcgtcgc agctgtaaaa
     9241 gccgtgcgag aagtacaccg catcctcaac gatccggagg cccgggacgt ggacaagctt
     9301 cgtgccgccg attgcctact cgtccgcctc aaccctatca tcaccggcca cgtgatgagg
     9361 atcgagcaca ccaccaacac cgcatcgaag atcccacgca atcggcgctg gatgcgttga
     9421 agtgaatgaa atcgatgaat atcccgcggg agaaagctgc ttgatcagtt cggccattcc
     9481 gggctgcctc gttgcgagaa gctgctggcc gacgaagatg gcaagacccc gaagttgatc
     9541 gaggccaacc ccgagctgga cacaacacca tgatttccaa ccagcgactc gcccccacaa
     9601 aatgaggata cgctgacggg gcccgccgcc tgccgcggca agccgccggc atcaccatcg
     9661 tgatcgaggc gcctggcgcg accacgaagg tgctcaacca gccccgtgat cgacgtgacg
     9721 ccacagccgg cgcgagattc gaggatctgt gatgcgcgtt cgttgcgcct agtcatcgag
     9781 atcaagcttc tgacgcgttc ggccaacgta aaggacgacg cgattgaccc atatcgaaag
     9841 tcgggctttt ttgacgcatt tagactgtgc atttagaggt caatgagggg ccgaatgaag
     9901 cgaccacgtc cgcaaccacc agagggcgca cctccagaca ccgtatggtt taggtaacca
     9961 atctcttggt tttcgatctc gctgatcgtt cgggccgatg acctcgttcc agagggcatc
    10021 acgcgtcttt tgctcgtcga gccgaccccg ttacaagtca aaggcctgcc gcgttcggag
    10081 agggctggcg cgcctatcca cccacgcggt cagctacgac ctactttctg ctgttctgcg
    10141 cgggatgagc ccgttgccac agtaaggttg tagcgtcctt caaagataga acggcgacgt
    10201 cgccggtacg ctctcgaagg ctaacggtct tttgttccac ttcacgtcg
//
LOCUS       DATILV010000762         2413 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3503988, whole genome shotgun sequence.
ACCESSION   DATILV010000762 DATILV010000000
VERSION     DATILV010000762.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2413)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2413)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2413
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3503988"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            229..1446
                     /locus_tag="VLJ17_18320"
     CDS             229..1446
                     /locus_tag="VLJ17_18320"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV24975.1"
                     /translation="MAIGLAKNIFALVPITVLALAIAVPASAQEGVVRVGVTLRMIVE
                     NGLKYGQLTKDELEEANAKGGINGHKVEVILLDDECKPDKGIANVNRFIHQNKVHLVL
                     GSTCSSVSLPMVDITAKEEVSQIIPHSTNTGITQKGSAWVFRTSVSERFYASVHAKYL
                     SEHVGKKVGYLFTNDGAAISFARDYKAFMKKTYDVDPAYEAQMQETDLDFRAHLLKIK
                     SLGVEVLAIGGQMDAIARIAQQSLEVGIPPKVRRVSASAASNGPVPELAGDAAVGLTF
                     AAAFNCKDERPVAQSFVKLVQDKYKVRCPDHDFSQAYETAQIVKLALSNAKLTLTDAS
                     LKADRTAIRDALANIKDYNGLASGPINFCADPTPQCRDGNRTGILVEYTKGGKDFDTR
                     ILARVSFDPDFGL"
     gene            1642..>2413
                     /locus_tag="VLJ17_18325"
     CDS             1642..>2413
                     /locus_tag="VLJ17_18325"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSV24976.1"
                     /translation="MSDLISKDVALAPARLTIRSWFAELHPIVPWLIGWLILLPLPLF
                     LNNAYTQYVVNVMAINIILAVGLNIVKGFAGQVTVGHIALMAIGAYSSALLSTKLGFP
                     FWFALPSAMAVTALAGALVGIPSLRLEGAYLALATLGLAESVRIFISGTEFLGAAVGY
                     EGIPPPYIGRWAIADYGAYYYIVMPLALLGLYFSFSILSSDIGRAFKSIREDPLAAAA
                     SGVNVPKYKVIAFVLSALYAGCAGSLQAHMAPGFLHPNN"
BASE COUNT          494 a          743 c          696 g          480 t
ORIGIN      
        1 gctgcgatcc gaaccaagcc gcggttggcg tagcaaatcc cgcgggtttg aagtcggggc
       61 tggcagcgat cgcggcttca aagtgccgca tcgcagctgc cggcaaactc gcagaaagat
      121 ggggccggtt cataaaacaa cgagcccgaa gcggccggta actgcgacgc gataggaggc
      181 gccgagccac ccgcgcccag cggtttgtac aataggaggg acctcaagat ggcaatcggc
      241 ctagccaaaa acatcttcgc tctcgtgccg ataacggtac tggcactcgc aattgcggtg
      301 cccgcgtctg cccaagaagg cgttgttcgc gtcggcgtaa cgctgcgcat gatcgtcgag
      361 aacggcctga aatacgggca gttgacgaaa gacgagcttg aggaggccaa tgccaaaggt
      421 gggatcaacg gccacaaggt cgaggtcatt ctgctcgacg acgaatgcaa gccggataag
      481 ggcattgcca acgtcaatcg cttcattcac cagaataagg tgcacctggt gctgggctcg
      541 acctgcagct cggtctcgct gccgatggtt gacatcaccg caaaagaaga ggtgtcacag
      601 atcattcctc attcgaccaa caccggcatc acgcagaagg gcagcgcgtg ggtattccgc
      661 acatcggtct cggagcggtt ctatgcgtcg gtccacgcca aatatctgtc agagcacgtc
      721 ggcaagaaag tcggctatct gttcaccaat gatggcgccg cgatcagctt cgcgagagat
      781 tacaaggctt tcatgaaaaa gacctacgat gtcgacccgg cctacgaagc ccagatgcag
      841 gagacggatc tcgatttccg cgcccatctg ctcaagatca agtcgctcgg tgttgaggtt
      901 cttgccatcg gtgggcagat ggacgcgatc gcgcgcatcg cgcagcagtc gcttgaagtc
      961 ggaattccgc ccaaggttcg ccgtgtgtcg gcgtcggctg cttcgaacgg gcccgtccca
     1021 gaactcgcag gcgacgccgc ggttgggctg actttcgcgg ctgcgttcaa ttgcaaggat
     1081 gaacgtccgg tcgcacaaag cttcgtcaag ctggtccagg acaagtacaa agtccgctgt
     1141 cctgaccacg atttcagcca agcctacgag accgcccaaa tcgtgaagct ggccctgagc
     1201 aacgccaagc tcacactgac cgacgcttcc ctgaaggccg atagaaccgc catccgggat
     1261 gccctcgcca atatcaagga ctacaacggg ctcgcatcgg gaccgatcaa cttttgcgcc
     1321 gatccgacgc cgcagtgccg tgacggcaat cgcaccggca tcttggtcga atacaccaag
     1381 gggggcaaag acttcgacac ccgtatcctg gcgcgcgtct cgttcgaccc tgacttcggc
     1441 ctttagaatc cagtgtgatc gaaccaccct gcaccgtcag gcgcttgtcg cgggcgtcaa
     1501 cgccttcttg ccgcatgtca gcaagcaagg cgcgcggatc gcccccggac caagtgcgga
     1561 ggcggcaagc ccatgactgc gtagaaaggg ctcaatataa tcggatcaat attttcgagt
     1621 cgttggggga atgatctcgt cgtgtcggat ctcatcagca aggacgtcgc cctggcaccg
     1681 gcgaggctca ccatccgctc gtggttcgcg gagctgcatc ccatcgtgcc ttggttgatc
     1741 gggtggctta tccttctacc gctgcccctg ttcttgaaca acgcgtacac gcaatatgtc
     1801 gtcaacgtga tggccatcaa catcatcctg gctgtcgggt tgaacatcgt caaaggcttt
     1861 gccggccaag tgacagtggg ccacatcgct ttgatggcaa ttggcgccta ttcctccgca
     1921 ctgctctcaa ccaagctcgg tttcccgttc tggttcgcgc tcccgtcggc gatggcggtc
     1981 acggcacttg ccggagcact ggtcggcatc ccctcgcttc gcctcgaggg cgcctatctg
     2041 gcgttagcga cgctcgggct tgcggagtca gtccgcatct ttatctctgg aaccgaattt
     2101 ctcggtgccg cggtcggata cgaaggcatc ccgcccccct acattggacg ctgggcgatc
     2161 gccgactatg gtgcctatta ctatatcgtg atgccgctgg cgctactcgg tctctacttc
     2221 tccttcagca ttctgagctc cgacatcggc cgggcgttca aatccattcg cgaagacccg
     2281 ctcgccgccg cggcgagtgg cgtcaatgtg ccgaaataca aggtgattgc cttcgtgctg
     2341 agcgcgctct atgcgggctg cgccggcagc ctgcaggcgc acatggcacc gggcttcctc
     2401 catcccaaca act
//
LOCUS       DATILV010000763        10576 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4273107, whole genome shotgun sequence.
ACCESSION   DATILV010000763 DATILV010000000
VERSION     DATILV010000763.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10576)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10576)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10576
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4273107"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1237)
                     /locus_tag="VLJ17_18330"
     CDS             complement(<1..1237)
                     /locus_tag="VLJ17_18330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein TadG-related protein"
                     /protein_id="HSV24977.1"
                     /translation="MVRPADANLFVRFGRDQSGSYLVISAILMPVLIGLVGLGTDYGV
                     WLNASQRMQAAADAAAFSAATLLTGGNGGDVTTQANAIASTFGFADGTNGASVTINHP
                     PTSGANAGKAGAVEVIIRQPQSRFFSAMISSGALTVAARSVALSGNSGVGCILALNQT
                     ASAAISLQGTSNVALTGCSLYDNSNSGSALSVGGSSTLSALAVDVVGGVSGKTNITAS
                     QGVTTAVSPMANPYANASYGSYSGCAYNNYTAKNTVTLSPGVYCGGLNLNAGANVTLQ
                     PGIYYLDRGSLSVNGGATLTGTDVTLVFTSSTGNNYANATINGGATVNLSAPTTGPTA
                     GIVIFGDSNMPTGTSFKFNGGTTQVFGGAIYVPQAAAEFAGGANTSRACTQLVADTIA
                     FKGNANFAINCSGSGTKAIG"
     gene            complement(1666..3756)
                     /locus_tag="VLJ17_18335"
     CDS             complement(1666..3756)
                     /locus_tag="VLJ17_18335"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HSV24978.1"
                     /translation="MSSPQPTPTNDRTDPLLGAWTSPHETPPFAAIRPEHFRPAFDRA
                     MADHRAEIEVIANCSDCPSFANTIVALERSGQALDRVSDVFDMLAGAHTNDALMEIER
                     EMSPLLAAHHNRIHLHDGLYARIKTLWDRRAELGLTPEQARVLERYDVTFRRAGAGLP
                     AVAKSRMAEICERLAVLGTAFSQNVLADEQAYVLVLDGEEDLAGLSDGARAAARAAAA
                     ERGMPGKHVITLARSSVEPFLQSSARRDLREKAYGAWTARGNGDGATDNKTIIAEMIA
                     LRAERARLLGYPTFAHYRLDDAMAKTPQAVQALLDRVWPPARVRAMADRDALQELIQR
                     EGGNFDLAAWDWRYYAQKLRKVRCDIDAAEIAPYLVLDNMVAAAFDTAHRLFGLTFRE
                     LYDVSVWHADVRVWEVSGPTGQFLGVFFGDYFARSSKRSGAWMTTLRTQHKLDGDVRP
                     LVINVMNFAKASQGEPTLLSLDDARTLFHEFGHALHGLMSDVTFPMIAGTRVATDFVE
                     LPSQLYEHWLEEPDVLRRFARHHQTGEPMPEDLVRRLIAARAFDQGFATVEYMASALV
                     DLAFHQAPEPDRIDPAAFEADILGKIGMPAEIGMRHRSPHFLHVFASDGYAAAYYSYM
                     WSEVLDADAFEAFRETGNVFDPVTAARLRDDILAAGGTRDPGEAYQAFRGRPPSADAL
                     LRKRGFAEAAGGPK"
     gene            3858..4112
                     /locus_tag="VLJ17_18340"
     CDS             3858..4112
                     /locus_tag="VLJ17_18340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24979.1"
                     /translation="MSQTSSPAPRRIVWQSVITVLSAAVLISAEVFGAAFAGGWALAN
                     LVGLGDYSVYAQIVFFLVGVAVMVAFVRNGMRVEPFTTTK"
     gene            4673..5803
                     /locus_tag="VLJ17_18345"
     CDS             4673..5803
                     /locus_tag="VLJ17_18345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III PLP-dependent enzyme"
                     /protein_id="HSV24980.1"
                     /translation="MTERIHEFLRRRQDEGPCLVVDLEVVRDNYRAFAKALPDTRVFY
                     AVKANPSPEVLTLLAGLGSCFDAASVAEIDMVLAAGATPDRISYGNTIKKERDIARAF
                     ALGVRLFAVDCKAEVEKIARAAPGARVFCRFLFDCAGAEWPLSRKFGCDVAMAVDVLD
                     HAHRLGLEAHGVSFHVGSQQRRTQAWDQALKSAAAIFRACADRGIGLAMVNLGGGFPT
                     KYLKEVPAVETYGRSIFRALRKHFGNAIPETIIEPGRGMVGNAGIIEAEVVLVSKKSE
                     ADKLRWVYLDIGKFGGLAETMDESIRYPIRTPRDGGEAGPCVLAGPTCDSMDVLYEKT
                     PYELPVSLEIGDKVLIEGTGAYTTTYASVAFNGFAPLKAFHI"
     gene            5901..6479
                     /locus_tag="VLJ17_18350"
     CDS             5901..6479
                     /locus_tag="VLJ17_18350"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HSV24981.1"
                     /translation="MVTIRHERTTDIAAREALLNRCLGPARWAVTSERLREGRLPAEG
                     LSFVATEYGRIVGTVRLWHVSAGLGRPALLLGPLAVDADCRNRGVGGALMNRAIAEAR
                     GCGHREIILVGDAPYYARFGFSTAHAGKLVLPGPFEPHRLLGLALTPDAAAAPMGLVR
                     ATGAPAPEFVVSDTAGIGRKPAGKRSRLSRAA"
     gene            6545..7975
                     /locus_tag="VLJ17_18355"
     CDS             6545..7975
                     /locus_tag="VLJ17_18355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homospermidine synthase"
                     /protein_id="HSV24982.1"
                     /translation="MTDWPVHARIDGPIVMIGFGSIGKGTLPLIERHFSYDPARLVVI
                     DPDDADRKILDAHGIRFIHQAVTRDNYREFLTPLLTGGGGRGFCVNLSVDTSSIAIME
                     LARQLGAFYIDTVIEPWPGFYFDAKLGPEARSNYALRETLLEARRRSPGGITAVSCCG
                     ANPGMVSWFVKQALLDVARDLGVKAGEPKSREDWGQLAMILGVKGIHIAERDTQRARH
                     PKPPNVFVNTWSVEGFLSEGMQPAELGWGTHETWMPDNGRCHATGCEAAIYLQQPGAN
                     TRVRSWTPTPRAQYGFLVTHNESISIADYFTVRENGGVVYRPTCHYAYHPCNDAVLSL
                     HELFGRAGVVQDDHHILDEHEIVDGIDELGVLLYGHAKNAYWYGSQLSVEETRQLAPY
                     QNATGLQVTSAVLAGMVWALENPDRGIVEADEMDFRRCLEIQRPYLGPVIGTYTDWTP
                     LTGRPGLFPENIDPADPWQFRNVLVR"
     gene            8041..8271
                     /locus_tag="VLJ17_18360"
     CDS             8041..8271
                     /locus_tag="VLJ17_18360"
                     /inference="COORDINATES: protein motif:HMM:TIGR01552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008219 - cell death [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system
                     prevent-host-death family antitoxin"
                     /protein_id="HSV24983.1"
                     /translation="MSRHIKASEFKAKCLALMDEVARTGAVVIITKNRKPVAELVPHR
                     PRRQSARGVLKNELFIAGDIISPIDVEWDALK"
     gene            8253..8666
                     /locus_tag="VLJ17_18365"
     CDS             8253..8666
                     /locus_tag="VLJ17_18365"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HSV24984.1"
                     /translation="MGRAQVILLDTHAAIWLAIDQGLGKESRRMADKALADDRLTISA
                     ISFWELGMLIAKRRLRAAKSAGELRAKLLATGIRELPLTGEIAILAAELENLTGDLAD
                     RIIAATAIAHDATLMTADANLLRWRHRLKRQVAER"
     gene            complement(8755..9891)
                     /locus_tag="VLJ17_18370"
     CDS             complement(8755..9891)
                     /locus_tag="VLJ17_18370"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like serine protease"
                     /protein_id="HSV24985.1"
                     /translation="MLLRSEPIAYHVCIAPYLAGIALAVLAAGNGFAQQASTGETRTL
                     ERKSIAPEAEQRSKQDANKYQTRKGRLEAKPLDWSTTIGTPAPSGTRPAPQSDNPNAQ
                     GNTSKGGAPNARAKTDARRMYPGDWRRLTRAHGILEQSAHRRNIRLAAGSPDIFTQYG
                     EYVPTVNADAPIAVGKLFSSAGTCTASVVSPNNVIVTAAHCCWNRATNNWIGGWAFSP
                     AYNNGNAPYGTFNWSTATVLNSWINNGDVPSDVCVIKLQNDKAGRGVTYYTGWLGRSW
                     DWGSDQEHHMLGYPANIGSANVLEACTSESFSAGCGGSDVLNSGCSMTFGSSGGPWIR
                     NYRSDNWVNSVVHGPSCTGTFGKTFNGPRFTSGNIATLCNAAGC"
     gene            10013..10153
                     /locus_tag="VLJ17_18375"
     CDS             10013..10153
                     /locus_tag="VLJ17_18375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24986.1"
                     /translation="MSKSTVRMWRIGLVLFLFAVAGIAARAQDYPIRTVTFGRASPAL
                     SK"
     gene            complement(10189..>10576)
                     /locus_tag="VLJ17_18380"
     CDS             complement(10189..>10576)
                     /locus_tag="VLJ17_18380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008132422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HSV24987.1"
                     /translation="MLLMVLLFTVIGDFIEPVPTIIIFMPLVNALTQAGDINPVHMGV
                     VLIATLAFGLITPPYGLVLLMASKFVGVRFSQALRAALPIYAVFFATIAFTIYFPKVV
                     LWLPKQAIPESVGCFKNPSGSGYICP"
BASE COUNT         1932 a         3227 c         3332 g         2085 t
ORIGIN      
        1 agccgatcgc cttagtgccc gatccactgc aattgatggc gaaatttgcg ttgcccttga
       61 aggcgatggt gtcggcgaca agctgtgtgc aggctctgct cgtgttggcg ccgccggcaa
      121 actcagccgc agcctgcggg acatatattg ccccgccgaa cacctgcgtt gtaccgccgt
      181 tgaatttgaa ggacgtcccg gtcggcatat tgctgtcgcc gaaaataacg atgccggcgg
      241 tcggtccggt tgttggcgca gacagattga cggtggcgcc gccattgatc gtcgcgttcg
      301 cgtagttatt gccggtgctc gatgtaaaca cgagggtcac gtcggtcccc gtcagtgtcg
      361 cgccgccgtt cacagacaaa ctgccgcgat ccaaataata aatgccaggc tggagcgtta
      421 cgttggcgcc ggcgttgagg ttcagcccgc cgcaataaac gccggggctc agggtgaccg
      481 tattctttgc ggtgtaattg ttgtaggcgc agcccgaata ggatccgtag gaggcgttcg
      541 cataaggatt ggccataggc gataccgcgg tcgtcacacc ctggctcgcg gtaatgttcg
      601 tcttgcccga aacccctcca acgacgtcca ccgcaagcgc ggacaacgtt gacgatccgc
      661 cgacagaaag tgccgagccg ctgttggaat tgtcgtagag agagcacccg gtcaaggcga
      721 cattggaggt tccctgaaga ctgatggcgg cgcttgcagt ctggtttaat gcaaggatgc
      781 agcccacccc gctgttgccg ctcagggcga ccgaccgcgc cgcgaccgtg agtgctcccg
      841 aagagatcat cgccgagaaa aatcgagact gcggttgccg gatgatgacc tcgaccgccc
      901 ccgccttgcc ggcgttcgcg cccgacgtgg gagggtgatt gatggtcacg gacgcgccgt
      961 tcgtgccgtc ggcgaagcca aacgtgctcg cgatcgcatt agcctgtgtg gtcacgtcgc
     1021 cgccattgcc gcctgtgagc agcgttgctg cgctgaacgc tgccgcgtcg gcagccgcct
     1081 gcattctctg cgaagcattc agccacacgc cgtaatcggt ccccagaccg acgagtccga
     1141 tcagcaccgg catcaatatc gcggagatga ccaggtagct tccggattga tcccgcccaa
     1201 agcggacgaa caaattcgcg tcggccgggc ggaccaatgg aactttgctc cgtggtaggt
     1261 caggcaacca ggtcacggcc tcacggttgg cggcttttga ttgtgatttc atcactgcac
     1321 cggggttcgg ccgttgccga taatcgcttc gttccgagtt cgtgcggata agtgtccagc
     1381 gtctaaggca aacgatccgc acggcaatta tgcgaaactc cccttaggca tctgctaaaa
     1441 cgagtcccgg aaatcctggg cagaagacac gttttcttaa tcttccttga cgttcatctt
     1501 acgtcgattt gccgcttcgg cggcgcgccg tatgttcggc caccagcttg cagccagcgg
     1561 cgctgcgtcg aaatcgacac gcccagcact tctgctgccg cgctgatgcc aacaacccct
     1621 acgtattgca gagaattgca cagattcgcg tagattataa aattactatt ttggccctcc
     1681 cgccgcctcg gcaaagcccc gcttgcgtaa caaggcgtct gcgctgggcg gtcggccgcg
     1741 gaaggcttgg taggcctcgc cggggtcccg cgtgccgccc gccgccagga tatcgtcgcg
     1801 caggcgcgct gcggtgacgg gatcgaacac gttgccggtt tcccggaagg cttcaaaggc
     1861 gtcggcatcc agcacctccg accacatgta gctgtagtag gcggccgcat agccgtcgct
     1921 cgcgaacacg tgcaggaagt ggggcgaacg gtggcgcatg ccgatctcgg ccggcatgcc
     1981 gatcttcccc aagatgtcgg cctcgaacgc cgccgggtcg attcgatcgg gctccggcgc
     2041 ctgatggaat gcgagatcga ccagggccga ggccatatat tccaccgtgg cgaagccctg
     2101 atcgaaggcg cgcgccgcaa taaggcgtcg caccagatct tccggcatcg gttcgccggt
     2161 ctggtggtgg cgcgcgaagc ggcgcagcac gtcaggctcc tccagccaat gctcgtaaag
     2221 ttgggatggc agttcgacga aatcggtggc gacccgggtg ccggcgatca tcggaaaggt
     2281 gacgtccgac atcagcccat ggagcgcatg gccaaactcg tggaacaagg tgcgagcgtc
     2341 gtccagggag aggagcgtcg gttcgccttg gctcgccttg gcgaagttca tgacattgat
     2401 gaccaagggc cggacgtcgc cgtcgagctt gtgctgggtg cgcagcgtcg tcatccaggc
     2461 gccgctgcgc ttggaggagc gggcaaaata gtcgccgaaa aacaccccca ggaactggcc
     2521 ggtcggccct gacacctccc atacacgcac gtctgcgtgc caaactgaca cgtcgtacaa
     2581 ctcccggaag gtgaggccga acagccgatg cgcggtatcg aaggccgccg cgaccatgtt
     2641 gtcgagcacc aagtaggggg cgatctcggc cgcgtcgatg tcgcagcgca ccttgcgcag
     2701 cttttgcgca taatagcgcc aatcccaggc ggcgaggtcg aaattgccgc cctcccgctg
     2761 gatcagttcc tggagggcgt cacggtctgc catggcgcga acgcgtgccg gcggccaaac
     2821 gcgatcgagc agggcttgaa cggcttgcgg cgtttttgcc atggcatcgt caaggcgata
     2881 gtgcgcgaag gtcggatagc ccagcagccg tgcccgctcg gcgcgcaggg cgatcatctc
     2941 cgcgatgatg gtcttgttgt cggtcgcgcc gtcgccgttg ccacgggcag tccaggcgcc
     3001 gtaagccttc tcccgcaagt cgcgccgtgc cgacgactgc aggaacggtt cgacgctgga
     3061 ccgcgccagc gtgatgacgt gcttgcccgg catgccgcgc tccgctgcag cggcgcgggc
     3121 cgccgcacgg gctccgtcgc tcagtccggc gaggtcctcc tcgccatcaa gcaccagcac
     3181 gtaggcctgt tcgtcggcga gcacgttctg gctgaaggcg gtgccgagca cggccagccg
     3241 ctcgcagatc tctgccattc ggctcttcgc gacagccggg aggccggcgc cggcgcgacg
     3301 gaaggttacg tcgtagcgct cgaggacccg cgcctgttcg ggcgtaaggc cgagctccgc
     3361 gcgccggtcc catagcgtct tgatgcgggc ataaaggccg tcatgaaggt ggatgcgatt
     3421 gtggtgggcc gccaaaagcg gcgacatttc gcgctcgatc tccatcaggg cgtcgttggt
     3481 gtgggcgccg gccagcatgt cgaacacgtc agaaacccga tcgagcgcct gtccgctccg
     3541 ctctagcgcg acgattgtgt tggcaaagct cgggcagtcg gagcaattcg cgataacctc
     3601 gatttcagcc ctgtgatccg ccatggcgcg gtcaaaagcg ggccgaaagt gctccggccg
     3661 aatcgccgcg aagggcggcg tctcgtgggg agatgtccag gcacccagca ggggatcggt
     3721 gcggtcgttg gtgggggttg gctgaggcga gctcatcggc tatccagttc cggtctctga
     3781 catctgatcg ctgatctgta gtacggctcg atcttctatc atgtcgcgaa gattgcgggc
     3841 gaaaacagga caaacaaatg tcgcaaactt cctcacccgc gccccgtcgc atcgtctggc
     3901 aaagcgtcat cacggtgctc agcgcggctg tgctcatcag tgccgaggtg ttcggcgccg
     3961 cgtttgcggg cggctgggcg cttgcgaacc ttgtgggcct cggcgactac agcgtctacg
     4021 cgcagatcgt cttctttctt gtcggcgttg ccgtgatggt cgccttcgtg cgcaacggca
     4081 tgcgcgtcga gcccttcacg acgaccaagt gatgcttcaa agggctgctt cgctaagcgg
     4141 cttttaaaca cgtcggcatg atttcaaatt ttttttatcg tgcagacgct cgaagctgcg
     4201 caaaatgctt gcgtggattc tgaagatcac ttatctagga atcgcccaat ttcgcacgtg
     4261 cctgtggccg tgtgtcaatc ggtgggcatc cggacaagag gccggacagc cgcccggagc
     4321 gagatagcga tgatcgcaag atcatcggat cgtttgagct ccgaacactt gattggcagc
     4381 cggaggcgaa accggcgcac ctcgttctcc acgggggacg cggcttaaag caacgacgga
     4441 gcgggctttt ttggtctctg ccggttctcc acaaaccggc gcgggctacc gaagaggctt
     4501 gttcatcatt gccgcgcgtg cggatcgggg aactccccaa tccaatccaa ggcagcactg
     4561 cagggttttt gagccctttc gccggcgtgt ccccatcgcg cgtcgtgcga gacctcgaaa
     4621 ccccgcatca tatcgagcgg ttcaccgctc ccttgcctat ggggagagcg ccatgactga
     4681 gcgcatccat gagtttctgc gtcgccgcca ggacgagggg ccgtgtctcg tcgtcgacct
     4741 tgaggtggtg cgcgacaatt accgggcctt tgccaaagca ctgccggata cgcgggtgtt
     4801 ctacgccgtc aaggcaaacc cgtcgccgga agtgctgacg cttctcgccg gcctcggctc
     4861 ctgcttcgac gccgcctcgg tcgccgagat cgatatggtg ctcgccgccg gcgccacgcc
     4921 tgaccgcatt tcctatggca acaccatcaa gaaggagcgt gacatcgcgc gtgccttcgc
     4981 gctgggggtg cggctgtttg cggtcgactg caaggccgaa gtcgagaaga tcgcccgtgc
     5041 ggccccggga gcgcgcgtat tctgccgctt cctgttcgac tgcgctggcg ccgagtggcc
     5101 gttgtcgcgc aaattcggtt gcgacgtcgc catggcggtg gatgtgctcg atcacgccca
     5161 ccggctcggc ctcgaggctc atggtgtgtc gttccatgtc ggctcccagc agcgccgcac
     5221 gcaggcgtgg gatcaggcgc tcaagtcggc ggccgcaatc ttccgagcct gcgcggaccg
     5281 tggcatcggg cttgcgatgg tcaatctcgg cggcggtttt ccgaccaagt acctcaaaga
     5341 ggtgcctgcg gtggaaacct atggccggtc gatcttccgg gcgctgcgca agcatttcgg
     5401 caatgccatc ccggagacca tcatcgagcc ggggcgtggc atggtgggga atgccggcat
     5461 catcgaggcc gaagtggtgc tcgtctccaa aaagagcgag gccgataagc tccgttgggt
     5521 ctatctcgac attggcaagt tcggtggcct ggccgagacg atggacgaat cgatccgcta
     5581 tccgatccgc acgccacgtg acggcggcga ggcggggcct tgtgtcttgg ccggtccgac
     5641 ttgtgattcg atggacgttt tatatgaaaa aacgccctat gaattgccgg tcagcctgga
     5701 gataggcgac aaggtgctga tcgagggtac cggcgcctat acgacgactt atgcgtcggt
     5761 cgcattcaat ggcttcgcgc cgttgaaggc gttccatatc tgacgacaaa tgtcggatga
     5821 cggatgacag ggtcgagccc cgtcatctga tctccgacat ctgacccccg atccttgaca
     5881 tctgacatgc ggagttcgcc atggtgacga ttcgccatga acgcacgacc gacattgcgg
     5941 cgcgtgaggc cttgctgaac cgttgtctcg ggccggctcg ctgggccgtg acctctgaac
     6001 gattgcgcga aggaaggttg cccgccgagg ggctgtcctt cgtggcgacc gaatacggcc
     6061 ggatcgtcgg cacggttcgt ctgtggcatg tttcagccgg cctggggcgg cccgccttgc
     6121 tgcttggccc actcgcggtc gatgcggatt gccgcaatcg cggcgtcggc ggcgctttga
     6181 tgaaccgcgc gatcgccgag gcgcgcggat gcggtcaccg ggagattatc ctggtcggcg
     6241 acgctcccta ttacgcccgc ttcggcttct cgacggcgca tgccggcaag ctggtgctgc
     6301 cggggccgtt cgagccgcac cggctgctcg gccttgccct cacccctgat gccgctgcgg
     6361 ccccgatggg gctcgttcgc gccaccggag cgccggctcc tgaattcgtc gtttctgaca
     6421 cggcggggat cggtcggaag ccagcgggta agcgctcgcg cttgtcacgc gccgcttgat
     6481 ttcgccctca tccatcgctt tagacaacgc gccgtcgctt tttacttgtt ggagtttgag
     6541 agcaatgact gactggcccg ttcatgcccg catcgatggc cccatcgtga tgatcggctt
     6601 cggctcgatc ggcaagggca cgctgcccct gatcgagagg catttctcct acgatccagc
     6661 acggcttgtg gtgatcgacc cggacgatgc cgatcgcaag atcctcgatg cgcacggcat
     6721 ccggttcatc caccaggcgg tgacccgcga caactaccgc gaattcctga ccccactgct
     6781 gactgggggc ggcggtcgcg gcttttgcgt caacctgtcg gtcgatacca gctcgatcgc
     6841 catcatggag ctcgcccgcc agctcggcgc cttctacatt gacaccgtga tcgagccgtg
     6901 gccgggcttt tatttcgacg ccaagctcgg gccggaggcg cgctccaact atgcgctacg
     6961 ggagaccctt ctggaggcgc gccggcgcag tccgggcggc atcacggcgg tgtcgtgctg
     7021 cggcgccaat cccggaatgg tgtcgtggtt tgtcaagcaa gcgcttctcg atgtcgcgcg
     7081 cgaccttggc gtcaaagcag gtgagcccaa gtcccgggag gattggggtc agcttgccat
     7141 gatcctggga gtcaaaggca tccacatagc tgaacgcgac acccagcggg cacggcatcc
     7201 aaagccgccg aacgtttttg tcaacacttg gtcggtcgag ggatttctct ccgagggaat
     7261 gcagcctgct gagcttggct ggggcacgca cgagacctgg atgccggata acggccggtg
     7321 ccacgccacc ggctgcgagg ccgccatcta tctgcagcaa cccggcgcca acacccgcgt
     7381 gcgctcgtgg actccgactc cgcgggccca atacggtttc ctggtcaccc acaacgaatc
     7441 gatctcgatc gcggactatt ttacggtgcg ggagaacggt ggggtggtct atcgaccgac
     7501 ctgccattat gcctatcacc cctgcaacga cgccgtgctg tcgctgcacg aattgttcgg
     7561 ccgcgcgggc gtcgtccagg acgaccatca cattctcgac gaacatgaga tcgttgacgg
     7621 catcgacgag ctcggtgtgc tgctctacgg ccatgccaag aacgcctact ggtacggctc
     7681 ccagctttcc gtcgaggaga cgcggcaact cgccccctac cagaacgcga ccggcctgca
     7741 ggtgacctcg gcggtgctcg ccggcatggt gtgggcactg gaaaatccgg atcgcggcat
     7801 cgtcgaggct gacgaaatgg atttccgccg ctgtctcgaa atccagcggc catacctcgg
     7861 cccggtgatc gggacctata cggattggac accgttaacg ggtaggcccg gcctgttccc
     7921 ggaaaacatt gatccggcgg acccgtggca gttccgcaac gtgctcgtga ggtaagtaaa
     7981 acttgatctc aagcccattg gtgaatgtat gaccatggtc ctgaccatgg tcatactaac
     8041 atgtcccgcc acattaaggc ctccgagttc aaagctaagt gccttgcctt gatggatgaa
     8101 gttgcacgca ccggtgccgt ggtcatcatc accaaaaacc gcaaaccggt ggccgaactc
     8161 gtgccgcacc gtccacgcag gcaaagcgca cgcggtgttc tcaaaaatga gctttttatt
     8221 gccggggaca tcatttcacc gattgacgtc gagtgggacg cgctcaagtg atcctgctcg
     8281 atacccacgc ggcgatttgg cttgcgattg atcaggggct cggcaaagaa agccggagga
     8341 tggccgataa ggcactggcc gacgatcgtc ttaccatcag cgcgatcagt ttctgggaac
     8401 tgggaatgct gatcgccaag cgaagattgc gtgctgctaa atcggccggc gaactgcggg
     8461 caaagctgct tgcaaccggc atccgcgagc tgccgctcac cggcgagatc gcaattctcg
     8521 ccgccgaact cgaaaatctc accggcgatc tggcggatcg tatcatcgcg gcaactgcga
     8581 ttgcgcatga tgccacgttg atgacggccg acgccaattt gttacgatgg cgacatcgat
     8641 tgaagcgcca agttgcggag cgttagacta aagccgcagg cggcgaggat ccggcggcgc
     8701 acagctggtc ttaacttcaa ttgcggaaga aaccgtcagc caccaccgcg gccctcaaca
     8761 cccggccgca ttgcagagcg tggcgatgtt tcccgaggtg aagcggggcc cgttgaaggt
     8821 tttgccgaac gtgccggtgc aggatgggcc gtgcaccacc gaattgaccc agttgtcgct
     8881 ccggtagttg cggatccacg gaccgccgct cgatccgaag gtcatcgagc agccggagtt
     8941 gagtacgtcg gagccgccac agcccgcact gaaactttca gacgtgcagg cctccagcac
     9001 gttggcgctg ccaatattgg ccggatatcc gagcatatga tgttcctgat cgctgcccca
     9061 atcccacgag cggccaagcc agcccgtata gtaggtgacg ccgcgtcccg ccttatcgtt
     9121 ctgcagcttg atcacgcata cgtccgaggg gacgtcgccg ttattgatcc agctgttcag
     9181 caccgtggcc gtgctccagt tgaacgtgcc atatggcgcg ttgccgttgt tatacgcagg
     9241 tgagaacgcc catccgccga tccagttgtt cgtagcgcga ttccagcagc aatgcgcagc
     9301 agtcacgatg acgttgttgg ggctgaccac ggaggcggtg caggttccgg cgctggaaaa
     9361 gagtttgcca accgcaatgg gcgcatccgc gttcacggtc ggcacatact cgccatattg
     9421 cgtgaagata tccggcgagc cggcggcgag ccggatattt cggcggtggg cgctctgttc
     9481 gagtatccca tgcgcgcgcg tcagccgtcg ccagtcgccc gggtacatcc gccgtgcgtc
     9541 ggtcttcgcc cgcgcgttcg gagcaccgcc cttggacgta ttgccctggg cgttgggatt
     9601 gtcagactga ggcgccggcc gcgtgccgga gggcgcaggc gtgccgatgg tcgtactcca
     9661 gtccagcggc tttgcctcca accgcccttt gcgcgtctga tatttgttgg cgtcctgttt
     9721 ggaccgctgt tcggcttccg gcgcgatcga cttgcgctca agtgttcttg tctcgccagt
     9781 agaggcctgc tgggcgaaac catttccggc ggccagcaca gcgagagcga tgcccgccag
     9841 gtaaggagcg atgcagacgt ggtatgcaat tggttcggat cggagaagca tcgctgtcct
     9901 ctctagaaat tttgcgatgg acgttgggcg ggtgtgtagg ctggaaatac aacgtatacg
     9961 cgatttctca tagagactgg tcgactatct gtcaatgtat tgtgcgggca gaatgagcaa
    10021 gtcgactgtg cgcatgtggc gcatcggact tgtgctcttc ctcttcgccg tggctggcat
    10081 cgcggcgagg gctcaagact atccgatccg caccgtcact ttcgggcggg cgtcgccggc
    10141 actgagtaaa taagacgggg agaccggcac aggctgggct gcaccgcctc atgggcaaat
    10201 gtatccgctc ccactcggat tcttaaagca gccgaccgat tctggaatcg cttgtttcgg
    10261 cagccacagc acaacttttg gaaaatagat cgtgaacgcg atggtggcga agaacaccgc
    10321 atagatcggc agcgcagccc gcagcgcctg ggagaaacgt acaccgacga atttcgacgc
    10381 catcaggagt acaagtccgt aaggcggcgt gatgaggccg aaggcgagcg ttgcaatcag
    10441 tacgacgccc atgtgtaccg ggttgatgtc gccggcttgc gtcaatgcat tcactagcgg
    10501 catgaagatg atgatggttg gcaccggctc gatgaaatcg ccgatcacgg tgaacagcag
    10561 caccatcagc agcatg
//
LOCUS       DATILV010000764         3309 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4273684, whole genome shotgun sequence.
ACCESSION   DATILV010000764 DATILV010000000
VERSION     DATILV010000764.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3309
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4273684"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            182..1000
                     /locus_tag="VLJ17_18385"
     CDS             182..1000
                     /locus_tag="VLJ17_18385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011084111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HSV24988.1"
                     /translation="MFQLAKSIDDVITPIGDGCMLVVPREVSGVPMTATRALIKRGVK
                     RLHLVALPTSSLQADLFVGAGCVETLETSAVSLGEFGPAPRFTAAVTSGAIKMKDATC
                     PALHAALQASEKGVPFMPLRGLIGTDVLKYRDDWKVIDSPFASDDPIVLLPAIRPDVA
                     LIHAPMADRFGNVWIGRQRELATMVHAAEKTIATVERIHDGNLLDDPMLAAGTLPGFY
                     IESIAVAERGAWPLGLPDHYAADAEHLAMYAKMAATTEGFTDYLDKYVYGKRAV"
     gene            1112..1858
                     /locus_tag="VLJ17_18390"
     CDS             1112..1858
                     /locus_tag="VLJ17_18390"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007594624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HSV24989.1"
                     /translation="MKSSFRDEELLADVIARLIGDVRHVAVGNASPIPATAALLARER
                     GKGRPYVSLLQSRKYNFFTDGARELFDCAGQGRIDVFFLSGGQIDGQGSVNLVSTGDY
                     QHPKVRFPGSFGSAYLYYVVPKVILFRTEHSRRTLVPKVDFISAPGGSGKNVYRPGGP
                     IALVTNRCLFTFADGRFTLASVHPGHTVEEVSENTGFDFNKPRDVPETPAPSPETLTL
                     MRNVVASQVAEVYPQFAAQVFGIGTPAFAR"
     gene            1956..3047
                     /locus_tag="VLJ17_18395"
     CDS             1956..3047
                     /locus_tag="VLJ17_18395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HSV24990.1"
                     /translation="MKTVEAAVIGVGWVGGTRADTLARTALVDKLHLCEIRPDRLAEV
                     KALYKPATATLDYNDIIKNPNISVVYISTTPESNHYPICRDCLKSGKNVMLEKPIALE
                     LWEADELIQLAKRNNLKFTIGYSQRFNPKIAYAKKKIVDGTLGKVVSVLVSRHLSRSL
                     GKKIASRVRLSPVVMESTHDLDFVFWLLEPAKPVRVYSQGAYGYMQPINGSHDVMFTT
                     VTMDNGVAVMIGGGWNLPPSYPNYCATWIEITGTEGSLFLDDTQRDNWLNTQKDGQQF
                     PMSTMPGEWVDNVFAGGMGPETIHFLEACIRDTPVMVAPESARRVMETYSAADLSADR
                     NEPVDLPLSNETISAIAEFKQKIRAGVNS"
BASE COUNT          669 a          994 c         1011 g          635 t
ORIGIN      
        1 tcgccgcggt cggccgacac cgggggtgtt acttccactg taataacgaa gcgccgggtg
       61 cgcagctttt cctgcaggtt cgtcggcatc taacccaagt cgcaaaatcc agtggacgtt
      121 gcaagggcaa caatgggaaa aatggcggca gccgtgatgc cgcatgactt gacgggcagc
      181 gatgtttcaa ctggcgaaat caatcgatga cgtgatcacg ccgattggcg acggttgcat
      241 gttggtggtg ccgcgcgaag tctccggcgt gccgatgacg gcaacccggg cactcatcaa
      301 gcgcggagtg aagcgcctcc acctcgtagc gttgccgaca tcgagcttgc aggccgatct
      361 tttcgtcggc gccggttgcg tcgagacgtt ggagacgagc gcggtaagtc tcggcgagtt
      421 cggaccggca ccgcgtttca ctgccgcggt cacttcgggc gcaatcaaga tgaaggacgc
      481 gacttgcccc gcgctgcacg ccgcactgca ggcttccgaa aaaggcgtgc ccttcatgcc
      541 gctgcgcgga ttgatcggga cggacgtctt gaaataccgc gacgactgga aggtgatcga
      601 tagcccgttc gcgagtgacg atccgatcgt tctgcttcct gccatcaggc ccgatgtggc
      661 gctcatccat gcgccgatgg cggaccgttt cggaaatgtc tggattggcc ggcaacgcga
      721 actcgccact atggtacacg ctgccgaaaa aaccatcgcc acagtggaaa gaatccatga
      781 cggcaacctg cttgacgatc ccatgctcgc agccggcacg ctgccgggct tctatatcga
      841 aagcatcgcg gtcgccgaac gcggcgcctg gccgctaggg ctgcccgacc attacgcagc
      901 cgatgccgag catcttgcga tgtacgcgaa gatggcggcg accacggaag gtttcaccga
      961 ctatctggac aagtatgtgt atggcaagcg cgcggtctag ctcaaccgtg tcatggccgg
     1021 gcttgtcccg gccatcccga ttcggaaggc accgcgcatc cctaagcgag atcgccggga
     1081 cgagcccggc gatgacggtt gcgagggtga cgtgaaatcc tcattccgcg acgaggagct
     1141 tcttgccgac gtgatcgcgc gtctgatcgg tgacgttcgt cacgttgcag tcggcaacgc
     1201 gtcgccgatc ccggccaccg ccgcactgct ggcgcgcgaa cgcggcaagg gccggcccta
     1261 cgtttccctg ctgcagagcc gcaaatacaa tttcttcacc gacggtgcgc gcgaactttt
     1321 cgattgcgcc ggtcagggtc gtatcgacgt gttctttctc tctggaggac aaatcgacgg
     1381 tcagggcagc gtcaatctcg tgagcaccgg cgactaccag catccgaagg tgcgattccc
     1441 agggtcgttc ggttctgcct atctctacta cgtggtgccg aaagtgatct tgttccgcac
     1501 cgagcactca cggcgcacgc tggtgcctaa ggtcgacttt atcagcgcgc cgggcggaag
     1561 cggtaaaaat gtctatcggc ccggcgggcc gatcgcgctg gtgacaaacc gttgcctgtt
     1621 cacgtttgcc gatgggcgct ttacgctggc aagcgttcat cccggtcata cggttgaaga
     1681 agtcagcgag aacacgggct tcgatttcaa caaaccccgc gatgttccgg agacgccggc
     1741 gccatcgccc gagacgctta cacttatgcg caatgtggtc gcgtcgcagg tggccgaagt
     1801 ttacccgcaa tttgcggcgc aggtgtttgg gatcgggact cccgctttcg cacgttgaaa
     1861 agcacgctct tccggttatt ttgcacgtgg gctagtgtgc cgccgcgcgg ccggccggtc
     1921 gcagaacatc ataagaaacg gaaggaattc gtgcggtgaa aacggttgaa gctgcggtga
     1981 tcggtgtcgg ctgggtcggg ggcacgcgcg cggacacgct cgcccgcaca gcattggtgg
     2041 acaaattgca cctgtgcgaa atccggcctg atcggctcgc cgaagtaaag gcactctaca
     2101 agccggccac cgcgaccctt gactacaacg acatcatcaa gaatccgaac atatcggtcg
     2161 tctatatttc gaccacgccg gagtcgaacc actacccgat ctgccgcgat tgcctgaaat
     2221 caggcaagaa cgtaatgctc gagaaaccga tcgcgctgga attgtgggaa gccgacgaac
     2281 tgatccagct cgccaagcgc aataacctga aattcacgat cggctattcg cagcgcttca
     2341 atccgaaaat cgcctatgcc aagaagaaaa ttgtcgacgg gacgcttggc aaagttgtct
     2401 ccgtgctggt cagccggcat ctttcgcgca gcctgggcaa gaagatcgcc agccgcgtac
     2461 ggctttcccc ggtcgtcatg gaatccacgc acgatctcga ttttgtgttc tggttgctgg
     2521 agccggcaaa gcccgtgcgc gtctattcgc agggcgccta cggttatatg cagccgatca
     2581 acggctccca cgacgtcatg ttcaccacgg tgaccatgga caacggcgtg gcggtcatga
     2641 tcggcggcgg gtggaatctg cccccaagct atccgaacta ctgcgccacc tggatcgaga
     2701 tcaccggcac cgaaggctca ttgtttctcg acgacaccca gcgcgacaac tggctcaaca
     2761 cgcagaagga tggccagcag ttcccgatgt cgaccatgcc cggcgagtgg gttgacaacg
     2821 tgttcgccgg cggcatgggg cccgagacca ttcattttct ggaggcctgc atccgcgata
     2881 ctccggtgat ggtggcgccg gaaagcgccc gccgggtgat ggaaacctac agcgctgccg
     2941 atctttccgc cgatcggaac gagccggtcg acttaccgct gtcaaacgaa acaatttcgg
     3001 ccatcgccga gttcaagcag aaaatacgcg cgggagtgaa ttcgtgaata cttgtcccgg
     3061 gcgcagcgca gcacggagtg gtgcgctgca gaaccgggac cgcttcaatc tgtggcggtc
     3121 ccggatcagc attgcatcat ttcgcgctac gcgctcacgc tgcaatgcgt ccggggcacg
     3181 aaccaagagg acattcgcat gaaaaagtcg gctaagggcg tcggcctcgc gatcatcggt
     3241 ggcggccgcg tcgggctgtt ccgcggcgaa gtagcggcac gccacccggc ggtcgaatgg
     3301 atcgggctt
//
LOCUS       DATILV010000765         3996 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_181665, whole genome shotgun sequence.
ACCESSION   DATILV010000765 DATILV010000000
VERSION     DATILV010000765.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3996)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3996)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3996
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181665"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..239)
                     /locus_tag="VLJ17_18400"
                     /pseudo
     CDS             complement(1..239)
                     /locus_tag="VLJ17_18400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501450.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-phosphatase"
     gene            complement(622..1032)
                     /locus_tag="VLJ17_18405"
     CDS             complement(622..1032)
                     /locus_tag="VLJ17_18405"
                     /inference="COORDINATES: protein motif:HMM:NF020918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phasin family protein"
                     /protein_id="HSV24991.1"
                     /translation="MTAQYQATDPTNAPQALRDIAESGTAQLKENFEKMSTAASEATN
                     LMRNTYATSFKGAQDYSTKVLEFAHVNINATFEHARKLSNVKSPAEFFALSNDHMRQQ
                     FEALSRQAQELAATAQKMTAATAESIKAGAHKAV"
     gene            1318..1614
                     /locus_tag="VLJ17_18410"
     CDS             1318..1614
                     /locus_tag="VLJ17_18410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24992.1"
                     /translation="MKSIIVVFSTALCLTAGSALAGSPVVPNPSVTQAQADVTIGPNG
                     VGIGIGEGRRDRDRDRVRESDHDRLRVGDRDSDRGCRTVTVQERGETRTTRRCD"
     gene            1737..1898
                     /locus_tag="VLJ17_18415"
     CDS             1737..1898
                     /locus_tag="VLJ17_18415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020176843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3309 family protein"
                     /protein_id="HSV24993.1"
                     /translation="MSTILILILVVLLLGGFGGYHGYNRYGGSGLGGVLGLVLIIVVV
                     LWLVGGVHV"
     gene            2021..2398
                     /locus_tag="VLJ17_18420"
     CDS             2021..2398
                     /locus_tag="VLJ17_18420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020175318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV24994.1"
                     /translation="MRSLARLPASILIVEDDAFVRILGADMFAQAGFRVIEAVNGDEA
                     LESLEADSKVQLLFTDVNMSGTIDGLALARKVHDCWPHIGIIVVSGQSTPQPQELPAG
                     SHFHRKPYDADAVVRHARELTAA"
     gene            complement(2478..3638)
                     /locus_tag="VLJ17_18425"
     CDS             complement(2478..3638)
                     /locus_tag="VLJ17_18425"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HSV24995.1"
                     /translation="MPKVLESFKTWLKSANEAWASDVAVSEAPAQHAEAPDPVQGGGR
                     LQSRATVGIFALLVFYFLYFASPILVPIITALLLSMLLAPFVRLLEWVRVPRTLGALI
                     VVLVAVGILFGVAAGLRVPAQSWLTQPSRFARLEEKLRPIAASLAEIQNAIGQLEKAM
                     APSDGAALQKVEVTPPGLAGLLSSGIGHVASTITAIIGLLYFFLVAGDRFLRKLVLVT
                     PSLKDKKRAVEIVRNIEMDISFYLVMVAGINISIGIIVVATAGILGIPDPFLWGSLAA
                     VLSFAPYVGEFAIIILLSLAGILTFDNLIHALVAPAIYFVVMTICWQGVVPFVVGRRM
                     TLSPVAVFIMIIVLGWMWGVIGALVAVPVLASVKIICDRVGSLRPIAEFLSP"
     gene            complement(3738..>3996)
                     /locus_tag="VLJ17_18430"
     CDS             complement(3738..>3996)
                     /locus_tag="VLJ17_18430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV24996.1"
                     /translation="RIRPGQVTVEHFIGGGAESFDTNGLHFQKLSSDFFRAALGLGAG
                     DLRATAAGDRGATIEIPNVIFADRKVHGIEKLISVKPERTT"
BASE COUNT          858 a         1129 c         1162 g          847 t
ORIGIN      
        1 tgcggagcgt cattgccgga aagtctcatt tcggcgccgt gtccgccgat agcgggtagc
       61 cgcaatggcg caaacacggc gtccagattg cggatcagcc tgccgctgac cagcgcgagc
      121 gctccatcgc acttcgtgtg caattccttg agcgacgcac gcagcgatcc gggcaccacc
      181 acgccgccgg gcgtgtccgc ggtatccaga atggtgccgt cgacgtcgag cagcaatgcg
      241 atcgacctga gctcatctgg cctcggcagt tgtggctcac tgaatgaagg acgtgtaacg
      301 gcattgatgt gcatcgctca tccggagaat gtgggttgtc gcttcgttgt cggacgaggc
      361 cgacggggag attgggcgaa aggacgcgac gacgcgactc taacggcgaa gcgatcaaga
      421 tgacactctg tgcagccgga atttcctagg atttccggag ggggttcatc tgtttctcaa
      481 agagcaaact cgtggcaccc ggacactcgt ctcatcggat ctggtgcgtc cagacggcag
      541 caagttgaac agtttggcgc aaatcccatt tcagagcgaa gcccgggcgc cccagggctt
      601 cgagcgatcc aaaaccttgg atcaaaccgc tttatgagcg ccggccttga tggactctgc
      661 cgtcgcggct gtcatctttt gagcggttgc ggcgagttct tgagcctgtc gggagagtgc
      721 ttcgaattgc tgcctcatgt gatcgttgga tagcgcgaag aattccgccg gcgacttcac
      781 gttcgacaat ttcctggcat gctcaaacgt ggcgttgatg ttgacgtgag caaattcgag
      841 gaccttggta ctgtaatcct gtgcaccctt gaaggacgtg gcataggtgt tcctcatcag
      901 attggtggcc tcgctggcag cggtgctcat cttttcgaag ttttccttca actgtgcggt
      961 gccgctttcc gcgatatcac gaagagcttg cggtgcattg gttgggtcgg tcgcctgata
     1021 ttgcgcggtc atgacactca tcctttgggg cggcatgtaa aatccggcga gttgcccgcc
     1081 ctgcgctctc gtcgggcttt ttgatctgtt tgcgcgggcc tgacgcccgc ttgcaatggg
     1141 tgtgaacacc taaataagac tttaaaagtg aaatgcaagg caacatccga ctgagggcac
     1201 aataataaaa atgaacaata aatctgaaaa taacaaaaca gcatgcatgc cgtcccgctg
     1261 gaaataacat ggaacaaaag tgagccaggt acgtttattg atcaaccagg aggttttatg
     1321 aaatccatta ttgtagtatt ttcgaccgcg ctctgcttga cggcaggttc ggccttggca
     1381 ggctcccccg tcgttccgaa cccttccgtg acgcaggccc aggccgacgt gacgatcggt
     1441 cccaacgggg tcggcatcgg tatcggcgaa ggtcgccgcg atcgtgatcg tgatcgcgtt
     1501 cgtgaaagcg atcatgatcg acttagggta ggcgaccggg atagtgaccg tggttgccgg
     1561 accgtgacgg tccaggaacg cggcgagacc cgcacgactc gccgctgcga ttgacaagga
     1621 atattcggta gcgattccgc cccggccgtc gggagcggaa tcgccctccc agaattgggt
     1681 tcgtcgatgc ggccatggct tggcactacg cctgagcgcc gccaaggaga ttgacaatga
     1741 gcacgatttt aatcctcatt ttggtggttc tgctgctcgg cggcttcggc ggctaccatg
     1801 gctataatcg gtatggcggg tctggactcg gcggcgttct cggtctggtt ttgatcatcg
     1861 tggttgtgct ctggcttgtc ggcggcgtcc acgtttgatc gcgcaaactg gttcccaatt
     1921 gtggtcggta gcgcttagta gtaacacgca cgagattttt tctatggatt ctaaatatgc
     1981 tgagccgcgg aaccgaattc cgcgctgggt gttgccattg gtgcgttcct tagcccgcct
     2041 acctgcctcg atcctgatcg tcgaagacga cgcgtttgtg cgcatcttgg gggccgacat
     2101 gttcgcccag gccggtttcc gcgtgatcga ggccgtgaac ggcgatgagg cgctcgaatc
     2161 tcttgaggcg gactccaaag tgcaattact cttcaccgac gtaaatatgt cgggaacgat
     2221 cgacggattg gcgctcgccc ggaaggtaca tgactgctgg ccgcacattg gcatcatcgt
     2281 cgtttccggg cagtcgacgc cgcaacccca agaacttccc gccggctccc atttccaccg
     2341 gaagccctac gatgcggacg ccgtggtcag gcatgcccgt gaattgacgg ctgcataaaa
     2401 gggggccgcc gccttcctcg cggcctgggg catctttgca aagtgattca atcggccaag
     2461 aagttttgaa acggacacta aggactcagg aattcggcaa tcggacgcaa cgagccaacg
     2521 cggtcgcaaa taatcttcac gctggcaagc accggtacgg caaccagcgc tccgattacg
     2581 ccccacatcc agcccagcac gatgatcatg ataaataccg caaccggact aagtgtcatt
     2641 cgccgaccaa ccacgaaggg aacgacgccc tgccagcata ttgtcatcac cacgaaatat
     2701 attgcgggcg ccacgagagc gtgaatgagg ttgtcgaagg tcaggatgcc ggccaaggac
     2761 agcaggatga tgattgcaaa ctctccgacg taaggcgcaa agctcagtac cgcggcaagc
     2821 gaaccccaca aaaatggatc cggaatgccc agaattcctg ccgttgcgac cactataatt
     2881 ccgatcgata tattgatccc agcaaccatc accagataga acgagatatc catctcgata
     2941 ttgcgtacaa tttccacggc gcgttttttg tccttgaggg acggcgttac cagtaccaac
     3001 ttcctcaaaa acctgtcgcc cgcgacgaga aaaaagtaga ggaggccgat aatggctgtg
     3061 atcgtggatg ccacatgccc aatgcccgag gagaggaggc cggcaagacc tggcggtgtg
     3121 acctccactt tctgtaaggc ggcaccgtcg ctcggtgcca ttgctttttc gagctgcccg
     3181 attgcgtttt gaatttccgc caacgaagcc gcaatgggac ggagcttctc ctcaagacgg
     3241 gcgaatcggc ttggttgggt aagccagctc tgagctggaa ctctgaggcc agccgctacg
     3301 ccaaacaata ttccgacggc caccaacacg acgatcagtg ctcccaatgt acgcggcacg
     3361 cgaacccatt cgagcaggcg gacaaagggc gccaacagca tgctcaggag caaagccgtg
     3421 atgatcggaa cgagaatggg cgaggcgaaa tagagaaagt aaaataccag cagcgcgaat
     3481 atgccgacgg tcgctctcga ctgcaggcgc cctccaccct ggacggggtc aggtgcctcg
     3541 gcgtgctgcg ccggcgcctc gcttacagcg acatccgacg cccacgcctc gttcgctgat
     3601 ttaagccaag ttttaaagct ctccagcacc ttaggcacgt gaagcgggtc ctttcgcctc
     3661 gatgatggaa attaaatcgt ccagcgaggc cattttgatg gctcgccggc ccggccggcg
     3721 tttcatgggg gaggacttca ggtggtacgt tccggcttca cagagatcag cttctctatt
     3781 ccgtgcactt tgcggtcggc gaagatgaca ttcggaattt cgatcgtcgc cccgcgatcg
     3841 cctgccgcgg tcgcgcgaag gtcaccggca ccgagaccca gcgccgcgcg gaagaaatcc
     3901 gagctgagct tctgaaagtg caacccgttg gtatcaaagc tttcggcgcc gccgccaatg
     3961 aagtgctcta cggtcacctg ccccggccgt atgcgc
//
LOCUS       DATILV010000766        17738 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_693247, whole genome shotgun sequence.
ACCESSION   DATILV010000766 DATILV010000000
VERSION     DATILV010000766.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 17738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17738
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_693247"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1130
                     /locus_tag="VLJ17_18435"
     CDS             <1..1130
                     /locus_tag="VLJ17_18435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007601582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV24997.1"
                     /translation="LGSSDANAQEKLKIGLITTLSGPAAALGQQQRNGLQLAIKTLGN
                     RLGGREVELLIQDDELKPDIAVSKVKTYVERDKVDFVVGPIFSNILQAIIKPATESGT
                     FLISPNAGTSNFAGPECNANFFVTSYQNDQNHEVLGKYAQDKGMRRVFIMAPNYQAGK
                     DALAGFKRYFKGDVVDEVYVPLNQLDYAAELAKIAAAQPEAIFVFLPGGMGVNFVKQF
                     RQAGLADKITFLSAFTVDESTLPAQQDAALGFFGGANWAPNLDNPQNRAFVAAYEKDF
                     NAVPGSYAFQAYDAGLLIDSSLAATKGSTADKNALRAAMMKADFKSLRGAFKFNTNHY
                     PIQDFYLVKVAKRPDGRFETEIAQKVFENYSDPHVKDCKMK"
     gene            1269..2192
                     /locus_tag="VLJ17_18440"
     CDS             1269..2192
                     /locus_tag="VLJ17_18440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSV24998.1"
                     /translation="MSTTLIIVQFLNGLQLGVLLFLIAAGLTLVFGVMNFINLAHGVQ
                     YMLGAYFAVMFYGLAGNFVVALLLALAATLGFGLLLEFVVFRHLYDRDHLDQVIATFG
                     IILFLNQGVKLVWGAAPLSLPIPDAFSGSVVLMPGLLYPAWRLVVIAAGLATAALLYG
                     LVRFTRVGMLVRAGATNAAMVSALGVDIRRLFMIVFGFGTMLAGFAGVMIAPILSVEP
                     GMGDTVLIVAFVVIVIGGIGSIRGAFLSAMMVGLVDTLGRSFAVDIMRLFMAPSPART
                     VGPAIASMLIYLLMAIVLYVRPTGLFPARGR"
     gene            2193..3179
                     /locus_tag="VLJ17_18445"
     CDS             2193..3179
                     /locus_tag="VLJ17_18445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018456041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSV24999.1"
                     /translation="MAVVDGIEPKPPARASFSSDVMVPLLLFGFLALVPFASGETYLL
                     DRFIRIMIFAIAAIGLDLMVGYGGLISFGHAAFMGLGAYAVGILAAHGINEAALALPM
                     ALAAAMLFAFLTGVVSLRARGVYFIMITLAFGQMAFFTASSLAPYGGDDGLTVRTRDM
                     LLGLPVLQMPRAFYYLAFTCLLVSYLLCRALVASRFGRVFRGARENLDRMASMGFDSY
                     RFQLIAYMVSGMLGGLAGFLLANLTDFVSPAYMSWQRSGDLLIMVIFGGMGRLYGAVI
                     GAMAYLTIEELLSDYTEHWKAIFGPLLVIVAVFARGGLIGTVEKVVRSLRRG"
     gene            3172..3930
                     /locus_tag="VLJ17_18450"
     CDS             3172..3930
                     /locus_tag="VLJ17_18450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008835430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV25000.1"
                     /translation="MAEPQPVLRIEGLRKNFGAIAVTDGVALDVRPNELHAIIGPNGA
                     GKTTLINQISGFLTPNSGRILLNGHDITALPVHARAGLGLARTFQVTSILAGFSALEN
                     VALAVQAHTGSSFRFFRRVNAEPGLNDAAWAVLQEVGLGDRAHVRAGELSHGEKRALE
                     LAMALAIAPKLLLLDEPMAGTGRQETDRLIALLGRLKGRFAMLLVEHDMTAVFALADR
                     ISVMIYGRILASGTPDAVRNDAAVATAYLGDELE"
     gene            3933..4652
                     /locus_tag="VLJ17_18455"
     CDS             3933..4652
                     /locus_tag="VLJ17_18455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV25001.1"
                     /translation="MGAGSSAVLRLEHLAASYGPAQVLFDVSLEVDRGEVVTLIGRNG
                     MGKTTTIRVLMGLLPACGGAAYFDGHQLIGLPPYRIAQTGLGLVPEGRQIFSALTVEE
                     NLLATAAARFGPPRWQLRDVYAMFPALAERRRHMGDEISGGEQQMLAIGRALMTNPKL
                     LILDEATEGLAPLIRAKIWDCLARLKAEGQAILLVDKHVDALTKIADRHVVIEKGHIV
                     WTGDSAALAADGQVKRRYLQV"
     gene            complement(4700..4834)
                     /locus_tag="VLJ17_18460"
     CDS             complement(4700..4834)
                     /locus_tag="VLJ17_18460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25002.1"
                     /translation="MRRALLFLAIATIAFFVTIEIPVGPEANIKADFEPAMQIENAAG
                     "
     gene            5095..6261
                     /locus_tag="VLJ17_18465"
     CDS             5095..6261
                     /locus_tag="VLJ17_18465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018319679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV25003.1"
                     /translation="MSTFDRREFLIAASSVGAAVAFSSRAFADPGVSADKIVFGQAAV
                     FEGPTSALGIGMRDGLMAAFAEANAKGGVRGRKLELMSRDDGYEPAKSIEVTKALIDA
                     GVFALVGPVGTPTSLAAHPIAKEAGLPFIGPFTGAEALRNPYQAHIVNIRASYFQETE
                     VMVERLIKDRGFSKIAVFYQDDAFGRAGLEGTQRALQKRDMKLASEGTFERNTVAVKG
                     ALLDIRKGDPQAVIMIGPYAPCAEFIKLCRSVKMDWVFINISFVGSDALAKALGTAGA
                     GVLVTQVVPFPSDTSLPLVAAYQKALQAAVADTQPGFVSLEGYIVGRTVIAALDKIEG
                     EPTRVGLLEKLSAGPYDIDGFSLSFGPNKNQGSDAVYLTIIDPDGKFKPVTTLS"
     gene            6283..8487
                     /locus_tag="VLJ17_18470"
     CDS             6283..8487
                     /locus_tag="VLJ17_18470"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSV25004.1"
                     /translation="MEHEPRLGEVRASVGTRIYAAIATIAVLMVVATGVAFWSFSEVG
                     RTMRELVEDRFPVVEVSFELADAAAASVAIAPRLADAETLKALDEQMTLLTAADQRMR
                     QQVGKLPTTQTVNGAKIAAQIDRLDFGVEEAYRAAKERLNLISDARQRVTELVSAQEQ
                     LTQLFVAMTDEALFDLTLGMETAGGGQEPEALKNNLKSLSERELPAYGGTLSIVAETN
                     QLYGLLREVAVIGSKEFLVPSKERYTAISQRLLKALMAVEKTNENAKRRTAVERLLAF
                     GNGDRSLFALREREFETRAKLTQTLGSAIAAAATLEKEVQGLVVAARSATHDASAQTE
                     TLIAINSWLLAGISVFGITIAFAIAVFYVRPRIVNRMRRLWNITQAIAEGQLETAIDA
                     EGRDEIADIARAVAIFRDSAIERERLAAESERWANEQRQHSEERERLNAERVRAAEAE
                     SQRGTRINRIVEEFRNSITAILGELRGASNRLGTAAVDMDKVSNVASTDARIAEEKIG
                     ISSQHVSDTAGSTEDLARTIKRIEDEARKSNAAVSQAVQQFQRAVGTMSTLDDAASRI
                     DEVVGLIQSIAAKTNLLALNAKIEAARAGEAGRGFSVVAEEVKSLAGQTAKATEDVTA
                     QINSIQSAAGQARQSMSQLDAIIGQVSKMVESVAETVAEQSMSVANISNGANFASAEA
                     KSGSEAISRVANVSASARATAGEVKSLAGTVANDAERLDEHVDRFLKAVRAA"
     gene            9051..10703
                     /gene="ettA"
                     /locus_tag="VLJ17_18475"
     CDS             9051..10703
                     /gene="ettA"
                     /locus_tag="VLJ17_18475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0045900 - negative regulation of
                     translational elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HSV25005.1"
                     /translation="MARQFVYHMQGLTKTYPGNRKVLENINLSFYPDAKIGVLGINGS
                     GKSTLLRIMAGIDKEFTGDGWVAEGARVGYLPQEPQLDETMTVRENVMQGVAASKTIL
                     DRYNELAMNYSDETADEMTKLQDEIEAKGLWDLDSKIDQAMEALVCPPDDAAVGRLSG
                     GERRRVALCRLLLEQPDLLLLDEPTNHLDAETVNWLEGHLRDYPGAILIVTHDRYFLD
                     NVTGWILELDRGRGIPYQGNYSRWLVQKQKRLEQEGREEQARQNTLAREQEWIAASPR
                     ARQAKSKARYQRYEELLAKAAEKGPSTAQIVIPVAERLGQNVVDFDGLWKGFGDNLLI
                     DDLTFKLPPGGIVGIIGPNGAGKTTLFRMITGQEKPDRGTIKIGDSVKLGYVDQSRDS
                     LDAKATVWQEISGGLDQLQLGKREVNSRAYCAAFNFKGADQQKKVGTLSGGERNRVHL
                     AKMLKSGANLLLLDEPTNDLDVDTLRALEEALEDFAGCAVIISHDRWFLDRIATHILA
                     FEGDSHVEWFEGNFQDYEADKMRRLGTDSIIPHRLKYKKFSR"
     gene            10846..11484
                     /gene="pgsA"
                     /locus_tag="VLJ17_18480"
     CDS             10846..11484
                     /gene="pgsA"
                     /locus_tag="VLJ17_18480"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HSV25006.1"
                     /translation="MDAVTSRPLRGRPLAVPNLLTYARIAAVPLVVACMYWQAILLGG
                     IWLRWVALVIFIAAGVTDILDGYFARSLGQQSSFGRMLDPIADKLLVASCLLMLAADE
                     TIRGWSLWAAIVILCREILVSGLREYLAELRVSVPVTRLAKWKTTVQLVAIGFLLAGK
                     AGDDVVAVVTGNGMMTPVVTYCGLTLLWISAIVTLYTGYDYFRAGVRHLIEE"
     gene            11487..11738
                     /gene="moaD"
                     /locus_tag="VLJ17_18485"
     CDS             11487..11738
                     /gene="moaD"
                     /locus_tag="VLJ17_18485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin converting factor subunit 1"
                     /protein_id="HSV25007.1"
                     /translation="MKLLYFAWVRERVGKGEEVVEPPATVATVADLMTWLAGRGEEYA
                     FAFENPKVIRAAINRAHVKASTPIAGANEIAFFPPMTGG"
     gene            11743..12219
                     /locus_tag="VLJ17_18490"
     CDS             11743..12219
                     /locus_tag="VLJ17_18490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HSV25008.1"
                     /translation="MPATIRLQSADFDAGAEAALLTCGRTDIGAVVTFIGICRGSEAG
                     APVAAMILEHYPGMAEAEIARHVETAEARWPLLGVTVIHRYGRLVPGDNIVLVITAAS
                     HRHDAFAAAEFLMDYLKTRAPFWKKEERTDGAAWVDAKLTDEIAADLWAQVPPAAE"
     gene            12245..13186
                     /gene="prmB"
                     /locus_tag="VLJ17_18495"
     CDS             12245..13186
                     /gene="prmB"
                     /locus_tag="VLJ17_18495"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008276 - protein methyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA];
                     GO_process: GO:0042273 - ribosomal large subunit
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HSV25009.1"
                     /translation="MATASRPRARTLRVRRPRELTTILDHVRYAVTQFRAAQLVFAHG
                     TADPVAEAAFIVCEALHLPPDRFDVFADARVAHHERKKIFDLIEARIHTRKPAAYLMQ
                     KAYLRGVPFYVDERALVPRSYLAEILDGELFAGEEPSLIEDPGAVERVLDLCTGSGCL
                     AVIAAMRFPNAAVDAVDVSADALAVAARNVAEHGLNNRITLHCGDLFGPVHSTRYDVI
                     ISNPPYVDTAGMAALPPECRHEPTLALDGGPDGIAVVRRIIDNAGRHLTANAGLLCEV
                     GRDRRILEKTYPQTSFLWLDTEESTGEVLWLDAAQFA"
     gene            13232..14182
                     /locus_tag="VLJ17_18500"
     CDS             13232..14182
                     /locus_tag="VLJ17_18500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lyase"
                     /protein_id="HSV25010.1"
                     /translation="MKFITSMAAAFACTLATSAFAAQAIFYQLPPGAYPHDVAPAADG
                     TVWYSGQAKGILGRFDPKTGKNEEIPLGPGAAPHGVIIGPDGAPWLTEGGQNAIARVD
                     PATRQVKLFPLPREFAHANLNTATFDKKGILWFTGQAGVHGRVDPVTGKVDAWRSPRP
                     GSYGITSTPNGDVWFASLAGDFIGKIDPASGAVAVIEPPRKGAGPRRIWSDSKGMLWV
                     SFWNAGGVGRYDPATKSWKVWSMPKSTSGTYSVYVDDKDRVWATDWRANAIQRFDPVT
                     ETFETFPSDKSGASVRQMLGRPGEAWGGESGNDRLVVVRD"
     gene            14401..15858
                     /locus_tag="VLJ17_18505"
     CDS             14401..15858
                     /locus_tag="VLJ17_18505"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV25011.1"
                     /translation="MSRSKGMSAWLTIAASAFLATVVAPSAHAQTSAAAYEGARLITG
                     GGNVVENSAFVVENGRFTQVGRRGELRLPAGAGRVDLTGKTVMPTMVDLHGHLGFQNI
                     PAGTMSKETFTRDNLIDHLQRLAFHGVGAVVGVGDLVDRSDMKGGRTGWGDVVLRVRD
                     EVIPNAALFKTSGAGMAWPGSGAQGDPSRVDVAYPVTTAAEARAAVQDYVRIQPEFIK
                     IWVDDRQGRIPTLTPALYGAILDEAHKFNVPVAVHNVKQADAKAMVRGGMEGWLHVPV
                     RDGEVADDELVALVKDRVARNDRPHMWMTLSLITSWMNTKGGGRPSFLDDPLLRATYA
                     PRQIEDYWGEPLNKMTSEQVARVKSRFESDAKSAMRLRAAGIRVVGGTDTGQSRFLIG
                     YFNHMDLESMVAMGMTPAEAIVAATRDGAEIAKLNTGLVASGRNADFIVLDADPLENI
                     SNTRRIDKVFLRGQEVPRAEMAAKWQEKFGRAAAR"
     gene            16302..16619
                     /locus_tag="VLJ17_18510"
     CDS             16302..16619
                     /locus_tag="VLJ17_18510"
                     /inference="COORDINATES: protein motif:HMM:NF013777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSV25012.1"
                     /translation="MRVPAASKALSQQTLKDVLRRRWACCIMKRLGEHGTLHFGALKR
                     TIPGISNKVLTERLRHLEETHLLRREPKATPRPQVFYSLTARGQKLKDVLDRLSAVGA
                     GEK"
     gene            16873..17211
                     /locus_tag="VLJ17_18515"
     CDS             16873..17211
                     /locus_tag="VLJ17_18515"
                     /inference="COORDINATES: protein motif:HMM:NF013777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HSV25013.1"
                     /translation="MLKCSCGAAIPLDVLKRRWASCIMKKIEERGTLHFGALKRGIPG
                     ISKKVLTERLRDLEERRLLRRESKPAARPQMFYSLTVRGQELTNVLDTLCALGARWQH
                     EDTNNSIRLF"
BASE COUNT         3471 a         5294 c         5437 g         3536 t
ORIGIN      
        1 cattagggtc atcagacgca aacgcgcagg aaaagctgaa aatcggcctc atcaccacct
       61 tgtcaggacc ggcggccgcg ctcggtcagc aacaacgcaa cggcctccaa ctcgccatca
      121 agaccctggg caataggctc ggcggccgcg aggtcgagct tttgatccag gacgacgagc
      181 tcaagcccga tatcgcagtc tccaaggtga agacctatgt ggaacgcgac aaagtcgact
      241 tcgtggtcgg accgatcttc tccaacatct tgcaggcaat catcaagccg gcgacggagt
      301 ccggtacctt cctgatcagc ccgaatgccg gtacgtcgaa tttcgcagga ccggagtgca
      361 atgcgaactt ctttgtcacc tcgtaccaga acgaccagaa ccacgaagtg ctcggcaaat
      421 acgcgcagga caagggcatg cggcgcgtgt ttatcatggc tccgaactac caggccggga
      481 aggacgcgct tgccggcttc aagcgctatt tcaaaggcga cgtggtcgac gaggtctacg
      541 tgccgctcaa ccagctcgac tatgcggctg aactcgccaa gattgcggcc gcgcagccgg
      601 aagcgatctt cgtatttctt cccggcggta tgggggtgaa tttcgtcaag cagttccgac
      661 aggccggcct tgccgataag atcacgttcc tgtcagcctt tacggtcgat gagtcaacgt
      721 tgccggcgca gcaagacgcg gcgctcggct tcttcggcgg cgcgaactgg gcgcccaatc
      781 tcgacaatcc acagaacagg gcgtttgtag ccgcctacga aaaggatttc aacgccgtgc
      841 caggcagcta cgccttccag gcatatgatg ccggattgct gatcgacagt tcactcgcgg
      901 cgaccaaggg cagcactgct gacaagaacg cgttacgcgc cgcgatgatg aaggcggatt
      961 tcaagtcgct gcgcggcgcg tttaagttca acaccaacca ctatccgatc caagacttct
     1021 atttggtaaa ggtggcgaag cgcccggacg gtaggttcga gaccgagatc gctcaaaagg
     1081 tgttcgaaaa ctacagcgat ccacacgtta aggattgcaa gatgaagtag cgggatagct
     1141 atggctgtag tccggatgga gcgcagaaat ccggaccgcg gtgcccgatc ttacggcagc
     1201 ccgcattcgg ctacgctcca tgcgggctac cggaaggacc cacgacggca tctgcgttga
     1261 cttccccaat gtccaccacg ctcatcatcg tgcagttcct caacgggcta cagctcggtg
     1321 tgctgctgtt cctgatcgct gcgggcctca cgctggtgtt tggtgtgatg aatttcatca
     1381 atctcgccca tggcgttcaa tacatgctcg gcgcctattt cgccgtgatg ttctatgggc
     1441 tcgccggcaa ctttgtcgtc gccctgctgt tggcgctggc cgccacgctg gggttcgggc
     1501 tcctgctcga attcgtcgtg ttccgtcatc tctatgatcg cgatcatctt gaccaggtga
     1561 tcgcaacctt cggcatcatt ctgttcctca atcagggcgt gaagctggtt tggggggcgg
     1621 ctccactgag cctaccgatt ccggatgcgt tttcgggttc tgtggtgctg atgccgggcc
     1681 tgctttatcc ggcttggcgt ctcgtggtga tcgcggccgg gctcgccacc gcggccctgc
     1741 tctacggact ggtccgattc accagggtcg gcatgctggt gcgggccggc gcgaccaatg
     1801 ccgcgatggt gtcggcgctc ggtgtcgaca tccgtcgact gttcatgatc gtgttcggct
     1861 tcggcacgat gctggcaggt tttgccggtg tcatgatcgc gccaatcctg tcggtcgaac
     1921 ctggcatggg tgacaccgtg ttgattgttg cctttgtggt gatcgtcatc ggtggtatcg
     1981 gctcgatccg cggcgctttt ctgtccgcca tgatggtcgg gctggtcgac acccttgggc
     2041 gttcgttcgc ggtcgatatc atgcgcctgt ttatggcgcc ctcgccggca cgcacggtcg
     2101 ggcccgccat tgcctcgatg ctgatttacc ttttgatggc aatcgtgctt tatgtccgac
     2161 cgaccgggtt gtttcccgca cggggacgtt gaatggccgt ggtcgacggg atcgagccga
     2221 aacctccggc ccgtgcaagc ttctcctccg acgtcatggt gccgttgctg ctgttcgggt
     2281 ttctggcgct cgtgccattc gcctcgggtg aaacctacct gctcgatcgt ttcatccgca
     2341 tcatgatctt cgctattgcg gctatcgggc tcgatctcat ggtcggttac ggcgggctga
     2401 tctcattcgg ccatgcggcc ttcatggggc ttggtgccta tgcggtgggc atcttggccg
     2461 cgcacggcat caatgaggcc gcccttgcgc tgccgatggc gctggcggcc gcgatgctgt
     2521 tcgccttcct gaccggcgtg gtgagcctgc gcgcccgggg cgtctacttc atcatgatca
     2581 cgctcgcgtt cggacagatg gcatttttca ctgcaagctc gcttgctccc tatgggggcg
     2641 acgacggcct gaccgttcgc acgcgcgaca tgttattggg actgccggtg ctgcaaatgc
     2701 cccgcgcgtt ctactacctc gccttcacct gtctgctcgt gtcctacctt ctgtgtcgcg
     2761 ccctggtggc gtcgcgcttc ggccgggtgt ttcggggcgc ccgcgaaaat ctggaccgca
     2821 tggcttcgat ggggtttgat agctaccggt tccagctgat cgcctatatg gtatcgggta
     2881 tgctcggcgg acttgcgggc tttcttctgg cgaacctcac ggatttcgtg tcgcccgcct
     2941 acatgtcgtg gcagcgctcg ggcgacctcc tgatcatggt cattttcggc ggcatggggc
     3001 ggctctacgg tgccgtcatt ggggccatgg cctacctcac catcgaggaa ctcttgtccg
     3061 actatacgga acattggaag gcgatcttcg gaccgctgct tgtcatcgtt gcggtgtttg
     3121 cacgcggcgg cctgattggg acggtggaaa aggtggtgcg gagtctgcgg cgtggctgaa
     3181 ccgcaacctg ttctgcgaat cgagggcctg cgcaagaatt tcggcgcaat tgccgtcacc
     3241 gacggcgtcg ccctcgacgt gcggccgaac gaattgcacg ccatcatcgg ccccaacggt
     3301 gccggcaaga ccaccctcat caaccagatc tccggctttc tcacgccgaa cagcggccgc
     3361 atcctgctca atggccacga tatcaccgcc ctgccggtcc atgcccgcgc cggcctcggc
     3421 ttggcgcgca cattccaggt cacgtctatc ctggcgggat tctcggcgct cgaaaacgtt
     3481 gcgctcgcgg tgcaggctca caccggatcg agcttccgat ttttcaggcg cgtaaacgcc
     3541 gaaccgggcc tcaacgatgc ggcgtgggcg gtgctgcaag aggtcggcct tggggatcgc
     3601 gcccacgtcc gggcagggga gctttcccat ggcgaaaagc gcgcgctcga actggccatg
     3661 gccctcgcca tcgcgcccaa gctgctgttg ctcgacgaac cgatggcggg aactggtcgc
     3721 caggagaccg accggctgat cgccctgctc gggcggctca aggggcggtt cgccatgctg
     3781 ctggtggagc acgacatgac ggcggtgttc gctctcgcag atcgcatctc ggtcatgatc
     3841 tatggacgga ttcttgccag cggcacgccc gatgcggtgc gcaacgacgc cgccgtggca
     3901 accgcctatt tgggcgacga gttggagtaa cgatgggcgc cggttcatcc gccgtgttga
     3961 ggctcgaaca cctcgccgcg agctacggcc ccgcccaggt gctcttcgac gtcagccttg
     4021 aggtcgaccg gggcgaagtc gtcaccctca ttggccgcaa cggcatgggc aagaccacca
     4081 cgattcgggt gcttatgggg ctactgccgg cgtgtggcgg tgctgcgtat ttcgacgggc
     4141 atcaactcat cggcctgccg ccctaccgca tcgcccagac cggccttggt ctggtgccgg
     4201 aagggcggca gatcttttct gcgctgaccg tcgaggagaa ccttctggcg acggccgctg
     4261 cacgcttcgg gccgccgcgc tggcaactgc gtgatgtcta cgctatgttt ccggcgctcg
     4321 ccgaacgacg tcgccatatg ggtgacgaga tctcgggcgg cgagcagcag atgctggcga
     4381 tcggccgcgc cctgatgacc aatccgaagc tgctgatcct cgacgaggca actgaagggc
     4441 tggcgccgct gatccgcgcc aaaatctggg actgtctcgc gcgtctcaag gcggaaggtc
     4501 aggcgatcct gctggttgat aagcatgtcg atgccctgac aaagattgcg gatcgccatg
     4561 tggtgatcga aaagggccac atcgtgtgga ccggtgattc ggcggcgctc gcggcggacg
     4621 gccaagtcaa acgacgatat ttgcaggttt gaggagggga taacctcaat aaatttgcaa
     4681 gacgaagccg gcctgcaaat taacctgcag cattttctat ctgcattgcg ggctcgaaat
     4741 cggccttgat attggcctcg gggcccactg gaatttcgat cgtgacgaag aaagcgatcg
     4801 tcgcgatggc caagaacaaa agagctctgc gcatttcggt ctcccgtggg cctgctgacg
     4861 atgccgccag gcggcggtcc acgaaaacgc cagtttgatt gaaagctaaa tgccaggaat
     4921 gaacggattc aaaaaagaac gcgcggcatc ttattaataa tcaggcacca tcggttttca
     4981 caaacaagag gttaatcagg cgaaagataa gttggttgac tgcaaagttc actaattcat
     5041 cattgttttt agctatcaat caaaatacgg gaaattaatc aaaagggcat ccacatgtcg
     5101 actttcgatc gtcgcgagtt cttgatcgcg gcctcatctg ttggggccgc cgttgcgttc
     5161 tcatcacggg cattcgccga tcccggcgtg tcggcagaca aaatcgtgtt tggccaggcc
     5221 gcggttttcg aaggccccac aagtgcgctc ggtatcggaa tgcgggacgg cctgatggca
     5281 gcgttcgctg aggcgaacgc aaagggcggc gtcaggggac gcaaactcga actcatgagc
     5341 cgcgatgacg gctatgagcc cgctaagtct atcgaggtga ccaaagcgct gatcgatgcc
     5401 ggagtcttcg ccctggtagg gccggtcggg acgccgacct cattggcggc gcatccgatc
     5461 gcgaaggaag cgggcttgcc gttcatcggt ccgttcacgg gcgcggaagc gctgcgtaat
     5521 ccttatcagg ctcacatcgt caatatccgc gcgtcctact ttcaggaaac cgaggtgatg
     5581 gtcgaacgcc tgatcaaaga tcgcggtttc tccaagatcg ccgtctttta tcaagatgac
     5641 gcgttcggcc gcgccggcct cgaaggcacc caacgcgctc tgcagaagcg cgacatgaaa
     5701 ctcgcgtcag aaggcacgtt cgagcgcaat acagtcgcgg taaaaggcgc gctgttggac
     5761 attcgcaagg gcgatccgca agcggtgatc atgatcgggc catacgcgcc ctgcgctgaa
     5821 ttcatcaaac tatgccgctc cgtgaagatg gactgggttt tcataaatat ttcgttcgtt
     5881 ggcagcgatg cgttggcgaa ggcactggga actgccggcg caggcgtgct ggtgacgcaa
     5941 gtcgttccat tcccctccga tacatcgctt ccgttggtgg ccgcctacca aaaggcgttg
     6001 caggctgcag ttgcggacac gcaaccgggc tttgtttctc tcgaaggcta catagtgggg
     6061 cgtaccgtga tcgccgcact cgacaaaatc gagggagaac cgacccgtgt cggcctgctc
     6121 gagaagctga gcgctggacc ctatgatatc gatggatttt ctctgtcgtt cggcccaaac
     6181 aaaaatcagg gctccgacgc cgtctatctg acgatcattg accccgacgg caagttcaaa
     6241 ccggtcacga cgttgagctg accggcgcgc agggagaacg aggtggagca cgaaccgcgc
     6301 ctcggggaag tacgagcgag cgtaggcacg cgaatctacg ccgccattgc gacgattgcg
     6361 gtcttaatgg tggtggcgac aggtgtggct ttttggtcgt tttccgaggt tgggcggacg
     6421 atgcgggagt tggtcgagga tcgatttccg gtcgtggaag tctcgttcga actggcggat
     6481 gctgcagccg catcggttgc gatcgcccca aggttggccg atgccgaaac tctgaaagcg
     6541 cttgacgagc agatgactct tctgaccgcc gcggaccagc gaatgcgtca gcaggtcggc
     6601 aagctgccga caacccagac ggtcaacggg gccaagatcg cggcgcaaat cgatcgactt
     6661 gatttcggtg tcgaggaagc ctaccgggca gccaaggaac gtttgaatct gatctccgac
     6721 gcgcggcaga gagtcaccga actcgtcagc gcgcaagagc agctcactca gctctttgtt
     6781 gcgatgaccg acgaggcact gttcgatttg acgctgggca tggaaactgc tggcggcggg
     6841 caggagcccg aagcgctcaa aaacaacctc aagtctttgt cggagcgtga gcttccagct
     6901 tatggcggca cgctctcaat cgttgccgag accaatcagc tttacgggct gttgcgcgaa
     6961 gtcgcggtga tcggctccaa agaatttctt gtgccttcaa aggaacgcta tacggcgatc
     7021 tcccagcggc tgctcaaggc cttgatggca gtggaaaaaa cgaacgaaaa tgccaaacga
     7081 cggaccgcgg ttgaacgtct gctggcattc ggaaacggcg accgcagcct gtttgcgctg
     7141 cgcgaacgtg aattcgaaac gcgcgccaag ctcacccaaa ccttagggtc ggcgatcgct
     7201 gccgccgcta ccttggagaa ggaagtccag ggcttggtcg tcgccgcgcg ctccgccacc
     7261 catgatgctt ccgcgcaaac cgaaacgctc attgccatca actcgtggct gcttgctggc
     7321 atcagcgtct tcggcatcac tatcgcgttc gccatcgcag ttttctacgt acggccgcga
     7381 atcgtcaatc ggatgcgacg cttgtggaac attacccagg ctattgcgga gggccagctt
     7441 gagaccgcga tcgatgccga aggtcgcgat gagatcgccg acatcgcccg cgcggtcgcg
     7501 atcttccgcg acagcgcgat cgagcgcgaa cgcctggctg cggaaagcga gcggtgggcc
     7561 aacgagcagc gccaacacag cgaggagcgc gagcgcctca atgccgagag ggtacgcgcc
     7621 gccgaggcag aaagccagcg cgggactcgg atcaaccgta tcgtcgagga attccgcaac
     7681 tccatcaccg ccattttggg tgagttgcgt ggcgcttcca atcggctggg cacagccgcc
     7741 gtcgacatgg acaaagtgtc gaacgtcgct tccaccgatg cgcggatcgc cgaggaaaaa
     7801 atcggcattt catcccaaca cgtatccgat actgccggct ccaccgagga tctcgcccgc
     7861 acgatcaaac ggatcgagga cgaggcccgc aaatccaatg ccgccgtcag ccaggccgtg
     7921 caacagttcc aacgcgcggt cggtaccatg tcgacgctcg atgacgctgc ctcgcgcatc
     7981 gacgaggtgg tcggcctgat ccaatcgatt gccgccaaaa ccaacctcct ggcactcaat
     8041 gccaaaatcg aggcagcgcg cgccggcgag gccggcaggg gcttctcggt cgtcgccgag
     8101 gaggtgaagt cgcttgcagg acagaccgcc aaggcgaccg aagacgtgac cgcccaaatc
     8161 aactcgatcc aatccgcggc ggggcaagcg cgtcaatcca tgagccagct cgacgcgatc
     8221 atcgggcagg tttccaaaat ggtcgaatcg gtcgccgaaa cggttgcgga gcagagtatg
     8281 tcggttgcca atatctcgaa cggcgcgaat tttgcttcag cggaagcaaa atcaggttcc
     8341 gaagcgatca gccgcgtggc caatgtcagc gccagcgcgc gcgcgaccgc cggagaggtg
     8401 aaatcactgg ccgggacggt ggcgaatgat gctgaacgtc tcgacgagca tgtcgatcgc
     8461 ttcttgaagg ccgtgcgcgc cgcgtagcac caacttagat ggagacatcg gctagtccgg
     8521 ccatcgttgg ggcctgcggc cgacttcggt gcttggcatg ccacttgggt ccgggaccgc
     8581 gcatgtaatg cagttccggt cggtaagtat cgaagatgtc ccttttcagc gagcgccaga
     8641 gggacgcaaa ggcaacgcct acccgcgggc tcgtgtttct tgggttcgtc atcgaacttg
     8701 tccgttgcca ggatgaccgt ttcatgacgt tagtccgtcg attgccggtt taggttcagc
     8761 gccatcctcg gccagatgac gttaaaattc ggtaggaatt ggcgatgacg tcacctccat
     8821 cttgagatag attttcgaaa tggttgccga gttacttagg caatcgttga aatcgaggtc
     8881 attcgggcgg gtggaaagcc cgcggccggc tcgaagcgcc catgcgggtc gcagcattcg
     8941 tgttcacagc tgccggtagg tggtggcgcg tctcttcgct tgccctttgc ggccggcgtc
     9001 gttacatcag cgcccaactt tcccgaaatt ttcaatgagg gcaggccgca atggcccgac
     9061 aattcgtcta tcacatgcag ggactcacca agacctatcc gggcaaccgc aaggtattgg
     9121 aaaatatcaa cctttcattc tatcccgacg ccaagatcgg ggttctgggc atcaacggtt
     9181 ccggcaagtc gacgctgctg cgaatcatgg ctgggatcga caaggagttc accggggatg
     9241 gctgggtcgc ggagggcgcc cgggtcggct atctgcccca ggagccccaa ctcgacgaga
     9301 ccatgacggt acgcgagaac gtcatgcagg gcgtcgcggc cagcaagacg atcctcgacc
     9361 gctacaacga actcgccatg aactattcgg atgagaccgc cgatgagatg accaagcttc
     9421 aggacgagat cgaggccaag ggactatggg acctcgactc caagatcgac caggccatgg
     9481 aagccctggt atgcccgccc gacgacgcgg cggtcgggcg gctgtcgggt ggcgagcggc
     9541 gccgcgtggc gctgtgccgg ctgctgctgg agcagcctga tttgctgctg ctcgacgagc
     9601 ccaccaacca tctcgatgcc gaaaccgtga attggcttga aggtcacctg cgcgactatc
     9661 cgggcgcgat cctgatcgtc acccacgacc gctatttcct tgacaacgtc accggctgga
     9721 tcctggaact cgaccgtggc cgcggcattc cctaccaggg caactattcg cgttggctgg
     9781 tgcagaagca gaagcgcctg gaacaggaag gccgcgagga gcaggcccgc cagaacactc
     9841 ttgcccgcga gcaggagtgg atcgccgcaa gcccgcgggc acgccaagcg aagtccaagg
     9901 cgcgctacca gcgctacgag gaactgctcg ccaaagccgc cgagaagggc ccctccaccg
     9961 ctcaaatcgt tattccggta gccgagcggc ttggtcagaa cgtcgtcgat ttcgacggtc
    10021 tttggaaggg attcggcgac aacctgctga tcgacgatct caccttcaag ctgccgccgg
    10081 gaggcatcgt cggtatcatc ggcccgaacg gcgccggcaa gaccaccctg ttccgcatga
    10141 tcaccgggca ggagaagccc gatcgaggca ccatcaagat cggcgattcg gtcaagctcg
    10201 gctatgtgga ccagtcgcgc gacagtctcg acgctaaagc gacggtatgg caggaaatct
    10261 caggtggcct cgaccagctt caactcggca aacgcgaggt aaattcgcgt gcctattgcg
    10321 cggccttcaa cttcaagggc gccgaccagc agaagaaggt cggcacgctg tcgggtggcg
    10381 agcgcaaccg cgtgcatctt gccaagatgc tcaaatccgg tgccaatctg ctgcttctcg
    10441 acgagcccac caacgacctc gatgtcgaca ccctgcgggc gctcgaggag gcgctggaag
    10501 atttcgccgg atgcgctgtc atcatcagcc acgaccgctg gttcctcgac cgcatcgcga
    10561 cacacatcct ggccttcgag ggcgacagcc acgtggagtg gttcgaaggc aactttcagg
    10621 actacgaggc cgacaagatg cgacgcctgg ggacggattc gatcattccg caccggctga
    10681 aatacaagaa gttttcccga tagggccggc atctgcgtcc cgacattgga tgaacgtcag
    10741 cgggatacgc cttgagcctg gcgggagcgc attttggcgc cctatagcca aatattaatg
    10801 cacccaacca gtgtgcatgt tctcgcaaag tactatgttc gaatcatgga tgcagtcacc
    10861 tcgcggcccc tcagggggag gcccctggcg gttcccaatt tgttaaccta tgcccgcatt
    10921 gcggcagtgc cgctcgtggt tgcctgcatg tattggcagg cgatcctgtt gggcgggatt
    10981 tggttgcgct gggttgcact cgtaatcttc atcgcggctg gggtcactga cattctcgac
    11041 ggctattttg cccgcagcct cgggcagcag tcgagctttg gtcgcatgct cgacccgatt
    11101 gccgacaagc tcctggtggc atcctgcctc ttaatgctgg ccgccgacga gaccatcagg
    11161 ggctggtcgc tgtgggccgc gatcgtcatc ctgtgccgcg agatcctggt atccggtctg
    11221 cgtgaatatc tggccgaatt gcgggtcagc gtcccggtga cacggctcgc caagtggaag
    11281 accactgttc agctcgtggc gatcggattc ctgctcgccg gcaaggcggg cgacgacgtc
    11341 gttgcggttg tcaccggaaa cggaatgatg acaccggtgg tcacctattg cggtctgaca
    11401 ctgctatgga tttccgccat tgtgacactc tacacgggat acgattattt ccgtgccggc
    11461 gtgcgacatc tgatcgagga atgagcgtga agcttctgta tttcgcctgg gtgcgggagc
    11521 gggttggcaa gggcgaggag gtcgtagaac cgcccgccac cgtcgcgacc gtcgccgacc
    11581 tcatgacttg gcttgccggg cgcggcgagg aatatgcatt tgcatttgaa aaccctaagg
    11641 tgatccgcgc ggccatcaac cgtgcccatg tcaaggccag cacaccgatc gcgggcgcca
    11701 acgagatcgc ttttttcccg ccaatgacgg ggggatagtt caatgcccgc gaccatacgg
    11761 ttgcaaagcg cagacttcga tgcgggcgcc gaagccgcat tgctcacgtg cgggcgcacg
    11821 gacatcggcg ccgtcgtcac tttcataggg atatgccggg gatcggaggc cggtgcgccg
    11881 gtcgcagcca tgatcctcga acactacccc ggcatggccg aagcggaaat tgctcgccat
    11941 gtggagacgg cagaggcgcg ttggccgttg ctcggcgtca ccgtcattca ccgctacggc
    12001 cggctcgtgc caggcgacaa catcgttctc gtcatcacag ccgcctccca tcgtcacgat
    12061 gccttcgcgg cggctgaatt cctcatggat taccttaaga cccgagcgcc tttctggaag
    12121 aaggaagagc ggaccgatgg cgccgcgtgg gtggatgcca aattgaccga cgagatcgct
    12181 gccgatttgt gggcccaagt gccaccggcg gccgaatagc cgcgccaccc aaggagagca
    12241 ttacgtggcc acagcgagcc gtcctcgcgc ccggaccttg cgcgtacgcc gccccaggga
    12301 actgacgacg atcctcgacc acgtgcgcta cgcagtaacg cagtttcggg cggcgcagct
    12361 cgtgttcgcc cacggtacag ccgaccccgt cgcggaagcc gcgttcatag tttgcgaggc
    12421 tctgcatctg ccgccagatc gtttcgacgt attcgccgat gcccgggtgg cgcatcacga
    12481 acgcaagaaa attttcgatc tgatcgaagc ccgcatccac acccgcaagc cggccgccta
    12541 tctgatgcaa aaggcctacc tacgcggcgt gccgttctat gtggatgagc gcgcactcgt
    12601 gccacgttca tatctcgctg aaatcttaga tggcgaatta tttgccggcg aagaaccttc
    12661 gctcattgag gatccgggtg cagtcgagcg cgtactcgat ctatgtaccg ggtcgggctg
    12721 ccttgcggtg atcgccgcta tgcgatttcc gaacgctgct gtggatgcgg tcgatgtttc
    12781 ggcagacgcg cttgcggttg cggcgcgcaa cgtcgccgaa cacggcctca acaaccgcat
    12841 cacgctgcac tgtggcgacc ttttcggccc ggtgcacagt acgcgctacg acgtcatcat
    12901 ttccaatccg ccttatgtgg acaccgccgg catggcggcg ctgccgcccg aatgtcgcca
    12961 cgagccaacg cttgcgctcg atggcggtcc tgacggtatt gcagtcgtac ggcggatcat
    13021 cgacaatgcg ggccgccatc tgaccgccaa tgcgggtctg ctttgcgagg tcgggcgtga
    13081 tcgccggatt ctggagaaga cttatccgca gacgagcttt ctctggctcg atacggagga
    13141 aagcacaggc gaagtgctct ggcttgatgc cgcccagttc gcctgaacga tcgcgcccac
    13201 cgggtggaga ctaaggatga gggagacgag aatgaaattc atcacctcta tggccgcagc
    13261 gttcgcatgc acattggcga cttctgcgtt tgcggcgcag gcgatctttt atcaactacc
    13321 gcccggcgcc tatccgcatg atgtcgcgcc cgccgccgat gggacggttt ggtacagcgg
    13381 ccaggcgaaa ggcattctcg gcaggttcga tcccaagacc ggcaagaacg aagaaatccc
    13441 gctcggcccc ggtgccgctc cccacggcgt gatcatcggg ccggacggtg cgccgtggct
    13501 caccgagggc ggccagaacg ccatagcgcg cgtcgatcca gcaacgcgcc aagtgaaatt
    13561 gttcccgctg cctcgggaat tcgcccacgc caatctcaac accgcgacct tcgacaagaa
    13621 aggtatcctg tggttcaccg gacaggcggg cgtgcatggc cgcgtcgatc cggtgaccgg
    13681 caaggttgat gcgtggcgct cgccgcggcc gggcagctac ggcattacgt cgacgccgaa
    13741 cggtgatgtg tggtttgctt cgctcgccgg cgactttatc ggcaagatcg accccgctag
    13801 cggcgccgtc gcggtgatcg agccgccacg caaaggtgcg ggtccgcggc gtatctggtc
    13861 ggactccaaa ggcatgctgt gggtcagctt ctggaacgcc ggcggcgtcg gccgctacga
    13921 tccggcgacc aagagctgga aagtctggtc gatgccgaag agcacctccg gcacctattc
    13981 ggtttatgtg gacgataagg atcgcgtatg ggcgactgac tggcgcgcca atgcgatcca
    14041 gcgcttcgat cctgtgaccg aaacgttcga gaccttccct agcgacaaga gcggcgccag
    14101 tgtgcgccag atgctgggcc gccccggtga ggcttggggc ggtgagtccg gcaacgaccg
    14161 gctggttgtc gtgcgggatt aggcggtttc gaccatcgga agccacagcg tacgcaaaag
    14221 gcgcgggctt cgcgccgtgc ccattggcca ccataatggt gggcacgcgg agccatcggg
    14281 gcggccgaag gccggacgcg ttggctttgc ccacgagagc gctgtcaaaa aaaggcggca
    14341 gcggatctat gcggctgctg ttatgagcca caaaacaatt ggcgccatgg gaggttctta
    14401 atgtctcgat cgaaagggat gtcggcctgg ctgacgattg cggccagcgc atttctcgcc
    14461 acggtcgtcg cgccctcggc gcatgcgcag acgtccgccg cagcctacga gggcgcccgg
    14521 ctgatcaccg gcggcggcaa cgtcgtcgaa aactcggcct tcgtggtcga gaacggacgc
    14581 ttcacccaag tggggcggcg cggcgaattg cgactccccg ccggtgccgg gcgcgtcgat
    14641 ctcaccggca agaccgtgat gcccaccatg gtggatctcc acggccatct tgggtttcag
    14701 aacatccccg ccggcaccat gtcgaaggag accttcacgc gcgacaatct cattgaccat
    14761 ctccagcggc ttgccttcca cggcgtcggc gcggtggtcg gtgtcggcga tctggtcgat
    14821 cgctccgaca tgaagggcgg ccgcaccggg tggggcgatg tcgtgctgcg ggtgcgcgac
    14881 gaagtcattc ccaacgccgc gctgttcaag acctcaggcg ccggcatggc atggccggga
    14941 tcaggcgctc aaggcgaccc atcccgggtc gatgtcgcct atccggtgac gaccgcagcg
    15001 gaggcccgcg cagcggtgca ggactatgtc cgcatccagc ccgaattcat caagatttgg
    15061 gtcgacgatc gccaaggccg gataccgacg ctgacaccgg cgctctatgg agcaatcctc
    15121 gacgaggcac acaagttcaa cgttccggta gcagtccaca acgtcaaaca ggcggatgcc
    15181 aaggcaatgg tgcgtggtgg catggaaggt tggttacacg ttccggtacg cgatggtgaa
    15241 gtcgcagacg atgaactggt cgccctcgtg aaggatcggg tcgcccgcaa cgaccggcct
    15301 cacatgtgga tgacgctgtc gctcatcact tcgtggatga ataccaaggg cgggggccgg
    15361 cctagcttcc tcgacgaccc tctgctgcgg gcaacttacg cacccaggca gatcgaggac
    15421 tactggggcg agccgctcaa caagatgacg tccgagcagg tcgcacgcgt caaaagcagg
    15481 ttcgaatcag atgccaagag cgcgatgcgg ttgcgcgctg ccggtatccg agtggttgga
    15541 ggtaccgaca ccgggcagag ccggttcctg atcggctatt tcaaccacat ggacctcgaa
    15601 agcatggtgg cgatggggat gacgcctgcc gaggcaatcg tcgccgcaac ccgcgacggt
    15661 gccgagatcg ccaagctcaa caccggcctg gtggcttccg gccgcaacgc cgatttcatc
    15721 gtgctcgacg ccgatccgct cgaaaacatt tcgaatacgc ggcggatcga taaagtcttc
    15781 ctgcgcggtc aggaagtgcc ccgcgccgaa atggctgcca agtggcagga gaagttcggc
    15841 cgggcggcgg cgcgataaac tctagtcatt ctggggcgcg ggctcgccca agtgcgcgcc
    15901 ccggaacgac agccaattgc agacccgccg ccttgcccct gcacctcggc gggtctgcca
    15961 tcaattgctt ggcgatggcg ccgagcgtaa aacgccattg ggccgatgtc gtcgagcgtt
    16021 gtttctgccg gctcatggat tggcgatgca tcaccgcccg ttacgacaag ttcgcgcgca
    16081 actttttgtc cgccttgtgt ttcgtaccgg cctttgattt aattcaagtc tagaccctag
    16141 gtagtcgtcc ttacttgcaa tgaaataaga gggcactcga aaatcgagcc ttgaggtgtt
    16201 gcggatagcc ttgaggtgtt gcggatagcc ttagcgtttt gaaggtgacc ctcgcgcggg
    16261 cagaaaataa tttcggattg cgcaatcttt ttggcaccat catgcgagtt ccggccgcat
    16321 caaaggcttt gtcgcaacaa acgttgaagg acgtcttgag acgccgttgg gcgtgctgca
    16381 tcatgaaaag gctcggagag catgggacgc ttcacttcgg tgctctcaaa cgaacgattc
    16441 cgggaatttc caacaaggtg ttgaccgagc ggctccgcca tctggaggag acgcatcttc
    16501 tccgacgcga acccaaagcg acgccgcgcc cgcaagtgtt ctactccctg acagcgcgcg
    16561 gtcaaaaact aaaagacgtt ctcgaccgtc tgtccgcggt cggcgccgga gagaaatagc
    16621 tcggccactc ccaggctcgc tctggggcgc cccgcttatg gtgccggacg cttgccgctg
    16681 cgcgcgctcg acgatgccga catcctccaa gttgatcttg gtcaatgtca ccggttcgaa
    16741 attgttcttt catgcttcgt ccacacgtga gccccgttac acccctgcgg accaagaatt
    16801 tattggagga ttcttttttt ctgaggcacc atcatgcgag ttcaggacgc atcaaaggct
    16861 ttgtcgcaac gcatgttgaa atgcagctgc ggcgcagcta tccccttgga cgtcttgaaa
    16921 cgccgttggg cgtcctgcat catgaaaaag atcgaagagc gtgggacgct tcacttcggc
    16981 gcactcaaac gcgggattcc gggaatttcc aagaaggtgt tgaccgagcg gctccgcgat
    17041 ctggaggaga ggcgccttct ccgacgcgaa tccaaaccgg cagcgcgccc gcaaatgttc
    17101 tactccttaa cggtacgcgg tcaggaactg acaaacgttc tcgacactct gtgcgcgctc
    17161 ggcgcacgtt ggcaacatga agacaccaac aactcaattc gccttttttg aacaccagcg
    17221 ccagtcttta ttgtgatatt tggactgaaa ccttgccgga tgggttacaa gaaagtgcct
    17281 aattgcgtac agcaaatagt atatgtaatg tacttcactt ccgccgcgct ctcaaacgag
    17341 ggattccggg aatttccaag aaggtgttga ccgagcggct ccgtgatgtg gaggagaggc
    17401 gccttctccg acgcgaatcc aaaccggcag cgcgcccaca aatgttctgc tccttaacgg
    17461 cgcgcggtca ggaactgcaa ccgttctcga cactctgtgc gcgttcggcg cgcgctggca
    17521 acatgaagac aacttaattc gccattttga gcgccagtct ttatggtgat ggtgatgttt
    17581 gaccaaaacc ttgctggatc aggtacctga aagtgcctaa ttgcgtacag caaagagtat
    17641 acgtaatgtg cataaacggg cttgatcagg gcacaacaag aagaattatg cagcgctcaa
    17701 agaaagatta tttgtagcgc gtagagcgtg ccgatcgc
//
LOCUS       DATILV010000767         2855 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1978974, whole genome shotgun sequence.
ACCESSION   DATILV010000767 DATILV010000000
VERSION     DATILV010000767.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2855)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2855)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2855
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1978974"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1952
                     /locus_tag="VLJ17_18520"
     CDS             <1..1952
                     /locus_tag="VLJ17_18520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25014.1"
                     /translation="IVLTDEPVSCHVRVAPFEAGRIASIVLEKFGPTEWRSGPTLWTQ
                     GDPPDQTSAHKLTAGISAIRCRIEAPLGKPRFSEALAIDMRNAPPVLILLSMGGAWTG
                     APPPPPGNPDAQADLDPHGIEVDEDACRLRGIPDDLIRELTKNKNVQCNDLCDRNCTN
                     FIEYLGEQLLKAGLADELKSIKDSGYCNERDNEEGMHNQVIVGKWENSELEPVRPPGI
                     RTWEQILDNYRSLGKHHVILVGQSHGGAKFAGMTRDHWRWDNDLTVDLFVSWDSADLG
                     GGVSSVGPVPKTVLAFYQTANLVWWQNGKHIDEATEEHDLTHLFSHNAIARSQFVHDK
                     TMTFITDTVSSIRRKVRGGDSATFRMNADGTLGVLVELLQLPPFSTARAFELNGSPHM
                     CLVGKLDGHLQIRRIDEHGMLGSTVADRVVSAGFTAVTSYDAGGSTYLVLASNLSDQT
                     VVLTVRPDGSLGPVKYPTTPVQQTTGPLKGAWDLVEAFTVGADRFICLAKANGDVRIV
                     KIAADGSPSTVVPNSAGIFGGFNSLAAIAFYSIGTSTYLFTLGDGKSVYRMNGDGTIG
                     QRVWHEPGGFGLALRTMVAHVAAGANQSILLLDAIGRLERRSIGNNGALGPVFSVHTD
                     QAGATGLSAYAVADGAHLFILRGPT"
     gene            complement(2318..>2855)
                     /locus_tag="VLJ17_18525"
     CDS             complement(2318..>2855)
                     /locus_tag="VLJ17_18525"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HSV25015.1"
                     /translation="DPNMAYLCDEKMRDSVRHIGEDPDQLPHTYAKLINECIKDRPAN
                     MTVCMHICRGNFRSAWAAEGGYDPVAEILFNEFKLDGFFLEYDSPRAGSFAPLRFVPK
                     DKKIVLGLVTTKSGDMESADDLKRRIDQASRYVPLEQLSLSPQCGFSSTVLGNNITVD
                     AEIAKLSLVVRVTREVWG"
BASE COUNT          604 a          814 c          819 g          618 t
ORIGIN      
        1 gcattgtgct gaccgacgag cctgtgtcgt gtcatgtcag ggtcgctccc ttcgaggcgg
       61 gccgcattgc gtcgattgtt ctggagaaat tcggcccgac cgaatggcgg agcggcccta
      121 cgctttggac gcagggagat ccgccggacc agacaagcgc tcataagctc accgccggca
      181 tttctgcaat ccgttgtcgc atcgaagcgc cgctaggtaa gccgcgcttc agcgaagcac
      241 tcgccatcga tatgcgcaat gcgccgcccg tgctgattct tctgtcgatg ggcggagcat
      301 ggacgggagc gcccccaccg ccgcccggca atcctgatgc gcaggcggac ctcgacccgc
      361 acgggattga agtcgatgaa gatgcgtgcc gtttgcgggg aattcctgac gatctcattc
      421 gcgagctcac caaaaacaaa aacgtgcaat gcaacgacct gtgcgatcga aactgcacca
      481 acttcatcga ataccttggc gaacagttgc tcaaggcagg tttggcggat gaactgaaga
      541 gcatcaagga cagtggctac tgcaatgagc gcgacaacga ggagggcatg cataaccaag
      601 tcattgtcgg taagtgggaa aattcggagc tcgagcctgt acgtccaccg ggaatccgca
      661 cgtgggaaca gattctcgac aactatcgtt cgctaggaaa acatcacgtc attctggtgg
      721 gccaaagcca cggaggagcg aaattcgcgg gaatgactcg cgaccactgg cgttgggaca
      781 atgacctaac tgtcgacctg ttcgtctctt gggatagcgc agaccttggc ggcggtgtct
      841 cgagcgttgg gccggtgccc aagaccgtgt tggcgttcta tcagactgcc aatctcgtct
      901 ggtggcaaaa cgggaagcac atcgacgaag ccaccgagga gcacgacctg acccatctct
      961 tcagtcataa cgcgatcgcg cgcagccagt tcgtgcacga taagacgatg acgttcatca
     1021 ccgacacggt gtcgtcgatt cgccgcaaag tccgcggcgg cgacagcgca accttccgga
     1081 tgaacgcgga tggaacgctt ggcgtgctcg tggaactcct gcagttgccg ccattttcga
     1141 cagcacgcgc attcgaactg aacggatcgc cacacatgtg cctcgtcggc aagctggacg
     1201 gacatcttca gatccggcgc atcgacgagc atggcatgct gggctcaacc gtcgctgatc
     1261 gggtcgtgag cgccggtttc acagccgtta cgtcttacga tgcgggtggc tctacatatc
     1321 tcgtactcgc cagcaatctg agcgaccaaa ccgtcgtctt gacggttcgt cccgatggct
     1381 cgttggggcc agtgaagtat ccaaccacgc ccgtgcagca gacgactggt ccgctcaagg
     1441 gagcctggga tctcgtggaa gcatttaccg ttggagccga ccgattcatc tgcctcgcca
     1501 aagcaaacgg ggacgttcga attgtgaaga tcgccgccga cggatcgccg tcgacagtcg
     1561 tccctaattc ggctgggata ttcgggggtt tcaattcttt ggccgccatc gcgttctatt
     1621 cgatcggtac atccacgtat ttgttcacgc tgggtgatgg aaagtccgtt tatcgcatga
     1681 acggtgacgg aaccatcggt cagcgcgtgt ggcacgagcc cggcggcttt ggactggctc
     1741 tgcgtacgat ggttgctcat gtcgccgccg gcgcgaatca gtcgatcctg ctgctcgatg
     1801 caatcggaag gctggagcgg cgatctatcg gcaataacgg ggcgctcggc cccgtgtttt
     1861 cagtccacac tgaccaagcc ggcgcaactg gactctctgc atatgccgtc gccgacggcg
     1921 cacatctttt catcttacgc ggaccgactt gattccatcg cgtgtcgtcg cgtatctggt
     1981 ttgagtttcg agattgcaac ttacaacgtt cttctgccct ataatcctcg ccaaggaaat
     2041 ctcatgtacc gaacaatctt gggaagactg gcgccggcat gcgtttgttt gacgcttttg
     2101 ttcatagggg gcatcctctc ctcccaccga atttacgcac agagtcttac atcagccata
     2161 aatcggtatg agttgatgga gttttgttcg gcagcgtcag atgcaggctt gtgaagtacg
     2221 gaagttgaga acattctaca acgattcacg catcgacaat cggtacggaa ggtttgctcc
     2281 tcgcgcctga cgtcaatttc tactacgaaa ttagggttca accccagact tcgcgcgtca
     2341 cccgcacgac aagcgacagc tttgcgatct cggcatcgac agtgatgttg ttgcccaaaa
     2401 ccgtgctgga aaaaccgcat tgcgggctta gcgacagctg ctcgagaggg acgtaacggc
     2461 tcgcctggtc gatgcgccgt ttgagatcgt cggcactttc catgtcgccg ctcttggtcg
     2521 taactaagcc gaggacgatt ttcttgtcct tgggcacgaa acgcagcgga gcgaagctgc
     2581 ccgcccgcgg cgagtcatat tccagaaaaa agccgtcgag cttgaattcg ttgaacagaa
     2641 tctccgccac cggatcgtag ccgccctcgg cggcccaggc gctgcgaaag ttgccacggc
     2701 agatatgcat gcagactgtc atgttggccg ggcggtcctt gatacactca ttaatcaatt
     2761 tggcgtaagt gtgcggcaac tggtcggggt cttcgccgat atggcgcacg ctatcccgca
     2821 tcttttcatc gcaaagatac gccatgttgg gatca
//
LOCUS       DATILV010000768         7621 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1979750, whole genome shotgun sequence.
ACCESSION   DATILV010000768 DATILV010000000
VERSION     DATILV010000768.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7621
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1979750"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            100..2022
                     /gene="dxs"
                     /locus_tag="VLJ17_18530"
     CDS             100..2022
                     /gene="dxs"
                     /locus_tag="VLJ17_18530"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007594649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009240 - isopentenyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HSV25016.1"
                     /translation="MYEPSKTPLLDQIRTPDNLRRFEPDRLRQIADELRQDLINAVSK
                     TGGHLGAGLGVVELTVALHHVFDTPRDRLIWDVGHQSYPHKILTGRRDRIRTIRQGGG
                     LSGFTKRAESEYDPFGAAHSSTSISAGLGMAVATKMEGRNNNIVCVIGDGAMSAGMAY
                     EAMNNAGAMDSRLIVILNDNDMSIAPPVGAMSAYLSRLLSGRTYLSLREIAKQLAHRL
                     PKFFEKRALRAEEYARGLITGGTLFEELGFYYVGPIDGHNLDHLLPVLRNVRDAKSGP
                     ILVHVVTQKGKGYPPAETSADKYHGVVAFDVATGTQAKSKAAAPSYTKVFAESLIKEA
                     RKDDKIVAITAAMPAGTGLDLFGKAFPDRTFDVGIAEQHAVTFAGGLATEGFKPFAVI
                     YSTFLQRAYDQVVHDIAIQRLPVRFSLDRAGLVGADGPTHAGSFDVAYLGCLPGFVLM
                     AAADEADLVHMVATQVAIDDRPSALRYPRGEGLGVPMPTEGKPLEIGRGRVLREGDKV
                     ALLCYGARLGECLKAADELAGFGLSTTVADARFAKPLDTELVLRLAREHDVMITIEEG
                     SIGGFGSYVLQTLADNGTLDRGIKFRAMVLPDVFIDQDSPNAMYAKAGLDAKGIVTKV
                     FEVLGKDAASGMVKLA"
     gene            2130..3113
                     /locus_tag="VLJ17_18535"
     CDS             2130..3113
                     /locus_tag="VLJ17_18535"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSV25017.1"
                     /translation="MRMPLTLLAVAAVANLSSIGSSSAEEWPTRSLTMVVPFAAGGGA
                     DLLARILAPPLSELLGQPVAIENVGGGGGMTGALRVSRAAPDGYQFVLGTTGTHSQNQ
                     SLYRNPLYHAATDFTPVALVAEQPILLIARKDFPADNLADFIAYTRANQDKMQFGSAG
                     TGSGVHLACVLLNAAIGVNVVHVPYRGTAPAMQDLIAGRIDYQCPVITPVLPQIQSNL
                     VKVIATLTKHRTPILPSLPTAQEQGLNGFEAYIWFAIFLPKGTPSDIVEKLQRAVAAA
                     ENMPSVQARLTEIGAAHITPERQTPQYLATFVEHEIGKWAAPIRASGISVD"
     gene            3501..4232
                     /locus_tag="VLJ17_18540"
     CDS             3501..4232
                     /locus_tag="VLJ17_18540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlyA family RNA methyltransferase"
                     /protein_id="HSV25018.1"
                     /translation="MPTRQRADILLVKRGLFESRSKAQAAIAAGLVTADAAPVRKASD
                     IIAVDAMLAAEPAFPWVSRGGVKLNDALARFGVAVAGTVCLDVGASTGGFTQVLLARG
                     ARRVYAVDVGTGQLHPRLRNEPKIIALERTDIRALDPGQLGEPPDFITIDVSFISLKL
                     VMPAALALAARPAHVLALVKPQFEAPRTYIKRGIVRDGAVHEAVVAEVSAYAISLGGR
                     DIVSFPSAIAGADGNHEFFVGATLG"
     gene            4225..5463
                     /locus_tag="VLJ17_18545"
     CDS             4225..5463
                     /locus_tag="VLJ17_18545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HSV25019.1"
                     /translation="MVERLTIDHLGTRGDGIVSADRGPIYVPYALPGEIVEVDPWPGH
                     PDRRNLLRVETASPARILPICAHFGTCGGCALQHWDSTHYRAWKRDTVVAQLRRASIA
                     ANVADLIDAHGEGRRRAVLHARRCTYDILKVGFAALHAHRIVSIDRCPILAPGLTGLI
                     DAAWAIAETLKPTAKPLDIQATATDDGIDVDVRGSGPLTAPLMLALARVAETHRLARI
                     TRHGELVAQRITPRVRVGRATVALPPGAFLQATALGEETLAQLVLRHIADAKSVADLF
                     AGVGPFALRLAERARVLAVDSDAGAIDALRRASAATRGLKPIIAERRDLFRRPFLAQE
                     LVGLDAVVFDPPRQGAEAQARELAKSPVPTIVAVSCNAATFGRDTKLLIDGGYRLGDV
                     TPVDQFRYSAHVEIVAQFVR"
     gene            complement(5482..6678)
                     /locus_tag="VLJ17_18550"
     CDS             complement(5482..6678)
                     /locus_tag="VLJ17_18550"
                     /inference="COORDINATES: protein motif:HMM:NF021508.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2235 domain-containing protein"
                     /protein_id="HSV25020.1"
                     /translation="MSKNVIFCADGTWNGPGEADGDDKVTCVTNVFKIYVNLDGVSTI
                     DSIRLKNEQERVLAAADGTVQQVAKYLHGVGDSDNFLVKALGGALGAGLITRIVRGYT
                     FVSRNYLAGDKIFIVGFSRGAYTARALAGLIAAKGLLDATKLDLTNREGAYRLGAAVW
                     YAHRRAQMRGNPDLLGRLEETVLDLPGFLTRPTGDDTLVTAPIEAVAVWDTVGALGIP
                     AFNAKMMRVDNFRFADLALSPKVRHGLHAVAVDEQREDFTPTLWDADQRVTQVLFVGA
                     HGDVGGGYPENDNGAMLSDAPLKWMTAQLKLLGVRFSSSPVFVPAPDVTGLAHSPWLH
                     PPWDVLPRGSRAFPGGLALSQGMLDRIAGGNVVAEGHAPAPYMPSNLAGYVAGGAAKP
                     GVEIVP"
     gene            6982..7263
                     /locus_tag="VLJ17_18555"
     CDS             6982..7263
                     /locus_tag="VLJ17_18555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2277 domain-containing protein"
                     /protein_id="HSV25021.1"
                     /translation="MCRNIKTLHNFEPPATDEEIRASALQFVRKLSGFGHPSQANQVV
                     FDRAVDQVTAAARELLASLVTNAPPRDREVEAAKARARAADRFRGSYAR"
     gene            complement(7277..>7621)
                     /locus_tag="VLJ17_18560"
     CDS             complement(7277..>7621)
                     /locus_tag="VLJ17_18560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002710920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HSV25022.1"
                     /translation="AQKFRRWYRNRVLALFGEVDAVLLPATPCTAPQIGQLTFSLDGV
                     QMPVRANLGIYTQPISFIGLPVVSVPVPLKPLPIAVQIVAAPWREDVALRIAYALEEK
                     GVVAAPKPAGGF"
BASE COUNT         1395 a         2506 c         2291 g         1429 t
ORIGIN      
        1 tagtgtcgcg cgcctcgtaa cccgcccgta aatgtctcgc ccaacccgtg agtgtccgcc
       61 acagccacca actttcattt gtcggcacgg agaaagcctt tgtacgaacc atccaagact
      121 ccgcttctcg accaaatccg cactcctgac aatttgcgac ggttcgaacc cgaccggctg
      181 cgccaaatcg ccgacgagct gcggcaggac ctcatcaatg cggtatccaa gacaggtggg
      241 catctcggcg ccggcctcgg tgtcgtagag ctgacagtcg cgttgcatca cgtcttcgat
      301 acgcctcgcg accgcttgat ttgggacgtt ggccaccaaa gctatccgca caaaatcctg
      361 accgggcgcc gcgaccgtat ccgtacgatc cggcagggcg gcggcctttc tggcttcacc
      421 aagcgggccg aaagtgaata tgacccgttt ggagctgctc attcgtcgac ctcgatctcc
      481 gccggccttg gcatggcggt ggcgaccaag atggagggac gcaacaataa catcgtgtgt
      541 gtcatcggtg acggcgcgat gtcggccggc atggcctatg aggccatgaa caatgccggc
      601 gctatggact cgcggctgat tgtcattctc aacgacaacg acatgtcaat tgcgccgcca
      661 gtcggcgcca tgtcggctta tttgtcgcgc ctcttgtccg gtcgtaccta tctgtcgcta
      721 cgtgagatcg ctaagcagct tgcgcatcgt ctgccgaagt tcttcgaaaa gcgtgcactg
      781 cgcgcggagg agtatgcacg cggtcttatc acgggcggca ccctgttcga ggaacttggc
      841 ttctattacg tcggcccgat cgatgggcac aatctcgatc atctgctgcc ggtgctgcgt
      901 aatgtgcgcg acgccaaatc aggaccgatc ctggtccacg tggtgaccca gaagggcaag
      961 ggctatccac cggctgagac atccgccgac aaatatcacg gcgttgtggc cttcgacgtc
     1021 gcaacgggga cgcaggcgaa atccaaggct gcggcgccct cctatacaaa ggtatttgcc
     1081 gagagtctga tcaaggaagc ccgtaaggac gacaagatcg tcgccataac ggccgcaatg
     1141 cccgcgggca ccggcctcga tttattcggc aaagcatttc cggaccgcac cttcgacgtc
     1201 ggcatcgctg agcagcatgc tgtaactttc gcgggagggc ttgcaacgga agggttcaag
     1261 ccgttcgccg taatctactc gacgttcttg cagcgcgcct atgatcaagt ggtgcacgac
     1321 attgcaatcc agcggctacc ggtgcggttt tccttggacc gggccggtct ggttggggcc
     1381 gacggtccga cccatgcagg atcattcgac gtcgcctacc tgggctgcct gccgggattc
     1441 gtcctgatgg cggccgccga cgaagccgac ctcgtccata tggtggcgac acaggttgcc
     1501 atcgacgatc gcccctcagc gctgcggtat ccgcgcggag aaggcctcgg cgtgccgatg
     1561 ccgaccgaag gcaaaccgtt ggagatcggc cgcggccgcg tgctacgcga aggcgacaag
     1621 gttgcgctcc tgtgttacgg cgcgcgtctc ggggaatgcc ttaaggcggc ggacgagctt
     1681 gctggctttg gcctgtcgac cacagtggcc gatgcgcgct tcgccaagcc tctcgatacc
     1741 gaactcgtgc tgcgccttgc acgcgaacac gatgtcatga tcaccatcga ggaaggctca
     1801 atcggcggtt tcggatctta tgtactccag acccttgctg acaacggcac gctcgaccgt
     1861 ggcatcaagt ttcgcgctat ggtgctcccg gacgtcttca tcgaccagga ctcgcccaac
     1921 gccatgtacg ccaaggcggg tctcgacgcc aagggcatcg tcaccaaggt gttcgaggtg
     1981 ctgggcaaag acgcggcctc cgggatggtg aagctcgcgt agggctgcga cggtcattag
     2041 gtccgcgcgc tttcaccgca tgttggcatc ggtgcggggc ctgctaggag ccggtaatct
     2101 ccgtagagat gtacccggtg agaggcccga tgcgaatgcc gttaacgctg ctggctgtag
     2161 cagcggttgc caatttgtcg agcatcggat cttcatcggc tgaggaatgg ccgacccggt
     2221 cgttgaccat ggtggtgccg ttcgctgccg ggggcggggc tgatctcctc gcacgcattc
     2281 tggcgccgcc gctttccgaa ttgctcggtc aaccggtcgc cattgaaaac gtcggtggag
     2341 ggggcggcat gacaggcgcc ctgcgggtat cgcgggctgc acctgacggc tatcaattcg
     2401 tgctcggcac aaccggcacc cactcccaga accaatccct ttacaggaat cccctctatc
     2461 acgctgcgac cgatttcacg ccggtggcgc ttgtcgctga acaaccgatc ctgcttatcg
     2521 cacgcaagga ttttcccgcc gacaatcttg cggacttcat cgcctatacg agggcgaacc
     2581 aagacaaaat gcaattcggc tcggccggca ccggctcggg ggttcacctt gcttgcgtgc
     2641 tattgaacgc ggcgatcggg gtgaacgtcg tccacgttcc gtatcgcggc acggcgccgg
     2701 cgatgcaaga cctgatcgct ggccggatcg actaccagtg ccccgtcatc acgccggtgt
     2761 tgccgcagat tcagagcaat ctggttaagg tcatcgcaac cttgacgaaa catcgcaccc
     2821 cgattttgcc gagcctccca accgctcagg aacaggggct caacggtttc gaagcctata
     2881 tatggttcgc cattttcctg ccaaaaggca cgccgtccga catcgtcgag aaactccagc
     2941 gcgccgtggc ggcggcggaa aatatgccgt ccgtacaagc acggctgacc gaaatcggcg
     3001 ccgcccacat cacgcctgag cgccagacgc cgcagtacct cgcgacattt gttgaacacg
     3061 aaattggcaa atgggcggca cccatcaggg ccagcggcat cagcgtggat tagcctacat
     3121 cacgccgtgc ctcttggcct tgagccgacg cttggtgggc gaggtgacct gatcggaaat
     3181 cgggacattc cagatctccg ccgtcccctg gccatcatag tcccgcatca gggtctcaac
     3241 cttcgccaga tccgcaatcg tcgcccccgt atgcctaatc cgcgggcgat cgagccgaaa
     3301 tcggtgcggc cgaaaatcgc cccctggacc ttgcgcgatc aggagacgat gttagttcag
     3361 ccccaatcgt tgcgccagtg cgcacgagcc gggcggcctc ttccgctgac cgaaaaatcc
     3421 atccatagga tcggcgtccg gagtataaca acggcgatcg cacaaaccgt cggccacaac
     3481 cgcatttgca ccgagccgcc atgcccactc gccagcgcgc cgacatcctg ctcgtcaaac
     3541 gcggcctgtt cgaaagccgc tccaaggccc aggctgcgat cgcggctggc cttgtcactg
     3601 cggacgcggc accggtgcgc aaggcgtctg acatcatcgc ggtcgatgct atgctcgcgg
     3661 ctgagccggc ctttccctgg gtatcgcgcg gcggcgtcaa gctcaatgac gcgctcgccc
     3721 gttttggcgt cgccgtcgcg ggcaccgtct gtctcgatgt cggcgcctcg accggcggat
     3781 ttacgcaggt gctgctcgcc cgcggcgcgc ggcgcgtcta tgcggtagac gttggcaccg
     3841 gccagttgca cccgcgcttg cgcaacgagc cgaagatcat agcattggag cgcaccgaca
     3901 tccgcgccct cgatccggga cagcttggcg agccaccgga tttcatcacc attgatgtga
     3961 gcttcatttc cctcaagctc gtgatgcctg ccgccttggc gcttgctgcc cggccggccc
     4021 atgtcctcgc tctggtgaag ccacagttcg aagcaccgcg cacttacatt aagaggggaa
     4081 tcgtgcgcga tggcgccgtt cacgaggcgg tcgtcgccga ggtctccgca tatgcgattt
     4141 cgcttggcgg ccgcgacatt gtgagctttc cctccgcaat cgctggcgcc gacggcaacc
     4201 acgagttctt cgtcggggcg acgcttggtt gaacgactta ccatcgacca tctcggcacc
     4261 cgcggcgatg gtatcgtgtc ggcggaccgt gggccgatct atgtaccgta tgcgctgcca
     4321 ggcgagatcg ttgaagtcga tccctggccg ggtcatccgg accggcgcaa cctgctacgc
     4381 gtcgaaaccg caagccccgc acgcatcctg ccaatctgcg cgcatttcgg cacatgcggc
     4441 ggctgcgcgc ttcagcattg ggactcaacg cactatcgcg cctggaagcg cgataccgtg
     4501 gtggcgcagc ttcgccgcgc cagcatcgcg gcgaacgtcg ccgacctcat cgatgcccac
     4561 ggcgagggtc gacgccgtgc tgtattacac gcgcggcgct gcacctatga catcctaaaa
     4621 gtcggcttcg cggccctgca tgcacaccgg atcgtatcga tcgatcgctg cccgattctc
     4681 gcacctggct tgaccggcct aatcgatgct gcatgggcga tcgccgaaac gctcaagccc
     4741 accgcaaagc cgctcgatat ccaggcgacc gccaccgatg atggcattga cgtggatgtg
     4801 cgtggctcgg gcccgctcac ggcaccgctc atgctcgcgc tcgcccgggt cgccgagact
     4861 caccggctgg cccgcattac ccggcacggc gagttggtcg cgcaacgcat cacgcctagg
     4921 gtacgggtgg ggcgtgctac cgtggctttg ccgcctggcg ccttcctcca ggcaacggcg
     4981 ctcggcgagg aaacactggc gcagcttgtg ttgcggcaca tcgcagacgc caagtcagtt
     5041 gctgacctgt tcgccggcgt cggaccgttc gccctacggc tcgccgaacg cgcccgcgtc
     5101 ctcgcggtcg acagcgacgc aggggccatc gatgcattgc gccgcgccag cgccgccacc
     5161 cgcgggctta agccgatcat cgcggaacgg cgcgacctgt tccgccgccc gttcctcgcc
     5221 caggaactcg tgggactcga cgcggtggtg tttgatccgc cgcgacaggg cgccgaagcg
     5281 caggcccgcg agctcgccaa aagcccagtc ccgaccatcg tggcggtgtc gtgcaatgcc
     5341 gccacctttg ggcgcgatac gaaactcctg atcgatggcg gctatcgcct cggcgacgtg
     5401 acacccgtcg accagttccg ttattccgct catgtggaga tcgtggcgca gttcgtgcgg
     5461 tgagcagcag cgcggatttc cctatggcac gatttcgacg ccgggcttcg cagcccctcc
     5521 cgcgacatag ccggctagat tcgacggcat atagggcgca ggcgcatgcc cctcggcgac
     5581 cacattgccg cctgcgatgc gatccaacat gccctgtgac aaagccaacc cgccgggaaa
     5641 cgcgcgcgag cctcggggca gcacgtccca gggcgggtgc agccacgggc tgtgcgccag
     5701 gcccgtgacg tcgggcgccg gaacaaaaac cggtgacgac gagaaccgca cgccgagcag
     5761 cttgagctga gccgtcatcc acttcagcgg tgcgtcggac agcatggccc cattgtcgtt
     5821 ctccggatag ccgccgccga cgtcgccgtg cgcgccgacg aacagcactt gcgtgacgcg
     5881 ctgatcggcg tcccacagcg tcggcgtgaa atcctcgcgc tgttcatcca ccgcgaccgc
     5941 gtgaagcccg tggcgaacct tgggactaag cgcgagatcg gcgaacctaa aattgtccac
     6001 gcgcatcatc tttgcgttga aggccggaat gccgagcgct cccaccgtgt cccacactgc
     6061 aactgcctcg atcggcgccg tcacaagcgt atcgtcgccc gtcggccgcg taagaaatcc
     6121 cggcaagtcg agcacggttt cctcaagccg accgagcaag tccgggttac ctcgcatttg
     6181 ggcgcgccga tgggcgtacc agaccgcagc gcccaggcga taagcgccct cccgattggt
     6241 tagatcgagt ttcgtcgcgt cgagcagacc ctttgcggcg atcaggcccg ccagtgcgcg
     6301 cgccgtgtag gcgccgcggc tgaagccaac aatgaatatc ttgtcgcccg ccagatagtt
     6361 tcgcgacaca aacgtgtagc cacgcacgat gcgcgtgatg aggccggcac cgagggcgcc
     6421 gcccaacgcc ttgacaagaa aattgtcgga atcgccgacg ccgtgcagat attttgctac
     6481 ctgttgcacg gtcccgtccg cggcggcgag gacgcgctcc tgctcgttct tgagccggat
     6541 ggagtcgatt gtgctgacgc catcgaggtt gacatatatt ttgaatacgt tcgtgacgca
     6601 tgtgactttg tcgtcaccgt ccgcctcccc cgggccgttc caggttccgt cggcgcaaaa
     6661 tatgacattc ttgctcatgc cccctccgag tcagattttg tggaacccgc atcggccctc
     6721 tcggcttcta ccaaaaatcg gaccgtcacg gtttcaggta cattccacgc accatcgagt
     6781 tcgggggccg cttgtccaat gctgtccgca agtgcacaac ccggtccaat gcgatcagct
     6841 acccgacaga tgttctgcct cttcgatcga agtgatgcgt gtattcatca aattacacta
     6901 tcacaagtag cgagactttg tctctaacgt cgcgccctca ctctatgggc gacgacgagg
     6961 actgatggcg gaggatttgg tatgtgccgt aacatcaaga ccctgcataa cttcgagccg
     7021 ccggctacgg acgaggagat tcgtgcgtca gccctgcagt tcgtccgcaa gctgagcggc
     7081 tttggccacc cttcccaggc caaccaggtc gtcttcgacc gcgcggtgga tcaggtgacg
     7141 gcagcggcgc gtgagctgct cgcctccctt gtcaccaatg cgccgccacg cgaccgcgaa
     7201 gttgaggcgg caaaggcccg cgccagggcg gcggaccgat tccgcggttc ctatgcacgg
     7261 tgaggtatgc cgaaaatcag aaacctcctg ccggctttgg cgccgccacc acgcccttct
     7321 cctccaacgc atatgcaatc cgcagcgcca cgtcttcgcg ccagggtgca gcgacgatct
     7381 ggaccgcgat cgggagcggc ttcagcggca ccgggactga caccaccggc aggccgataa
     7441 aggagatcgg ctgggtgtaa atgccgaggt tcgcccgcac cggcatttgg acgccgtcga
     7501 gtgagaaggt cagctgcccg atctgcgggg ctgtgcacgg cgtcgcgggc agcaacacgg
     7561 catccacctc cccaaacagc gccaggacgc ggttgcgata ccagcggcgg aatttttgcg
     7621 c
//
LOCUS       DATILV010000769         2480 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4275287, whole genome shotgun sequence.
ACCESSION   DATILV010000769 DATILV010000000
VERSION     DATILV010000769.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2480)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2480)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2480
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4275287"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(5..1618)
                     /locus_tag="VLJ17_18565"
     CDS             complement(5..1618)
                     /locus_tag="VLJ17_18565"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate binding protein"
                     /protein_id="HSV25023.1"
                     /translation="MAAYHRVLPSRLRNVFAALVHIVSLVFCITSWPAAGADQRLCIY
                     FLESLNPTQPARIHRLALAMTGALRTCGVSILLIFALPWPASWAADPLPRSVLILDQS
                     DTDSPWYHDFSSAFRSTVNAKSAARVSVYGEHLDLSRFSGPRHHELIRTYLRHKFSDR
                     PIGVVVAQGSSALEFLLRSRSQLWPKAPVVFASIDEVSIARLPLPPDVTGTTYQLTFR
                     DAVASARMLVRSLKRIAIVGDPFERQVVRSHFKQEVPAFATELELIDLMGLPMTELRK
                     RVAALPDDTAIIYTAINLDGAGVAYIPYEALAAVAEVANRPIVIDAETSIGYGGTGGL
                     IVTAGPVGQEAAKLALRILDGEQASGIPITAGSFARPIFDWRQLQRFGISERRLPPDS
                     DIRFRPPSIWEEHRNLVLAGILVFALQTGLAGVLLVQRRKRQRVEGLLKESEERMTFT
                     AASANVGLWQFNRGTGELWTTEHCRAMLGLSSTVPLTRDVFLAAIHPEDREAAISSFR
                     QALKPNQSAVSDVRVLLPDDQVRWVRIRA"
     gene            2030..>2480
                     /locus_tag="VLJ17_18570"
     CDS             2030..>2480
                     /locus_tag="VLJ17_18570"
                     /inference="COORDINATES: protein motif:HMM:NF014025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HSV25024.1"
                     /translation="MSLHDMVQAVVTVLAVINPVVCGSIFLILTPELAPAQKRWSAVK
                     VALSILIILMVSAVIGLKVLSIFGISLNVFRIVGGMIIAYMGFDMLRGRQTVAQTSPM
                     DDDTAAPNSLAPLIMFAAGPGTITAVVTLAAVHTPDRLPVTAIVAAVI"
BASE COUNT          547 a          700 c          734 g          499 t
ORIGIN      
        1 actctcaagc ccggatgcgg acccaacgca cctgatcgtc gggcaggagt acacgaacat
       61 cgctgacggc ggactggttc ggtttcaaag cctggcgaaa cgaggaaatg gcggcctcac
      121 gatcctccgg atggattgcc gccaggaata cgtcgcgcgt gagtgggaca gtgctgctca
      181 gaccaagcat tgcgcggcaa tgctcggtag tccataattc accggttcct cgattgaatt
      241 gccacagtcc gacgtttgcg gaagcggccg tgaatgtcat gcgctcttcg ctctccttga
      301 gcagaccttc gacgcgctgc cgcttgcgcc gctgcaccag caagactccg gcgaggcccg
      361 tctgcaaggc gaagacgagg atgccagcga gcacgagatt acgatgctcc tcccatatgc
      421 tcggtgggcg gaagcggatg tcgctgtccg gcggcaacct gcgttcgctg atcccgaagc
      481 gttgtagctg ccgccaatcg aatatcggtc tggcaaagct gcctgcggtg ataggaatgc
      541 cggacgcttg ttcgccatcg agaatgcgca gagcgagttt cgccgcctcc tggccgaccg
      601 ggccggcggt gacgatgagc ccgcctgtgc cgccatatcc gatcgaggtt tctgcgtcga
      661 tcacgatcgg ccgatttgcc acttccgcaa cagccgcgag tgcttcgtac ggaatataag
      721 ctactccagc accgtcgagg ttgatcgcag tgtatatgat ggcagtatcg tccggcagtg
      781 cggcgacgcg ttttcggagt tcagtcatcg gcagacccat aaggtcaatc agttccaact
      841 cggtggcaaa agcggggacc tcctgcttga aatgactccg cacgacttga cgctcgaacg
      901 gatcgccgac aatcgctatt cgcttcaggc ttcggaccaa catccgtgcc gaggcgaccg
      961 catcacgaaa tgtgagctga tacgtcgttc ccgttacatc gggtggcagg ggcaggcgag
     1021 cgatcgatac ctcgtcgatt gaggcaaaca ccacaggcgc cttgggccac agctgcgacc
     1081 gcgaacgaag taagaattcg agcgccgatg atccttgagc aaccacaaca ccgatcggcc
     1141 tgtcactaaa cttgtgccga agatatgtgc gaatgagctc atggtgtcgc ggcccgctga
     1201 agcgactgag atcgagatgc tccccgtaca cggagacgcg cgccgccgat ttggcattca
     1261 cggtcgatcg aaaggcggaa gagaaatcgt ggtaccacgg gctgtccgta tccgactgat
     1321 cgagaatcag caccgagcgc ggcaaagggt ccgcagccca ggaagcaggc catggcaatg
     1381 cgaaaatcag cagaatggat acgccgcacg ttctgagggc gcctgtcatg gcaagggcaa
     1441 gacggtgtat cctagcaggt tgcgtgggat tcaggctttc aagaaaatag atacacagcc
     1501 gttggtctgc gcccgctgcg ggccaagagg taatgcaaaa caccagcgaa acaatatgaa
     1561 cgagcgccgc aaaaacgttg cgcaaacggc ttggcagtac acggtggtac gcagccatgt
     1621 ctccccgcgt cgactatacc cccctgtcga acataccgca gccaacattc tagcatcacg
     1681 ggcaattcag acaatgggag acaacctcat tgccgtctta ccgatattgg accacggtcc
     1741 aatggagcgt ggtcattttt gccgatagcc ttccggtgcg gagccggccg agttcgcgat
     1801 gcagagtatc gttgcgacgg agacgtgaaa tacagttaga gtgtggtcta cgaacttatt
     1861 gctccgacgg tgcaaaagcc gtcggaccaa tcgcgtagtt tgtggaatat cgggcgttat
     1921 aacgttgcga gagtggatag cgtcggccct cgcacaagag gtccactcct gacgctgcac
     1981 ggctggggtc cgacttgcga tgccgattaa caatccagcg aattccgatg tgagccttca
     2041 cgatatggtg caggcagtcg tgaccgtcct ggcagtcata aacccagtgg tgtgcggctc
     2101 gattttttta atactcacgc cagaacttgc gccggcgcaa aaacggtggt cagccgtcaa
     2161 agtagcgctc agcattctca ttattctgat ggtgtccgca gtgattgggc tcaaagttct
     2221 gagcattttc ggcatttcgt tgaacgtatt ccggatcgta ggaggaatga tcatcgcata
     2281 tatgggcttc gatatgttga gggggcgtca gacggttgcg caaacgtcgc ccatggatga
     2341 cgatactgct gcgccgaact cgcttgcccc gctcatcatg tttgccgcag gaccagggac
     2401 gatcacagcc gtggtgacat tggcggccgt tcacacgccc gatcgtctgc cggtgaccgc
     2461 aattgtcgcc gcggtcatcg
//
LOCUS       DATILV010000770         3132 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3765319, whole genome shotgun sequence.
ACCESSION   DATILV010000770 DATILV010000000
VERSION     DATILV010000770.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3132
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3765319"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..371
                     /gene="bfr"
                     /locus_tag="VLJ17_18575"
     CDS             <1..371
                     /gene="bfr"
                     /locus_tag="VLJ17_18575"
                     /EC_number="1.16.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004322 - ferroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_process: GO:0006880 - intracellular sequestering of
                     iron ion [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HSV25025.1"
                     /translation="ALAKKWRKESIEEMEHADKLVHRIIFLDGFPNMQVLDPLHIGQT
                     VKEVLDCDLAAEMSARALYQEAATYCHGAKDYVSRDLFEKLMSDEEEHIDFLETQLEL
                     VARLGLELYAQHHIGDAEAD"
     gene            723..1957
                     /locus_tag="VLJ17_18580"
                     /pseudo
     CDS             723..1957
                     /locus_tag="VLJ17_18580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664155.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
     gene            1954..>3132
                     /locus_tag="VLJ17_18585"
     CDS             1954..>3132
                     /locus_tag="VLJ17_18585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018457799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSV25026.1"
                     /translation="MSVSSPFIFRPIATSLLGVAVMLGGTLGYALLPVASLPQVDFPT
                     IQVTTQLPGANPEAVASLITAPLERQFGQIPALATMTSSSSYGVSQITLQFELNREID
                     AAAQDVQSAINAAGSTLPRNLPYPPVYSKVNPADAPVLTLALTSPTISLRQMSDLADT
                     LIAQRLSEVTGVGHVSVQGGLKPAIRIQADLARLASYGIALEDLRTAIVAANVAGPKG
                     ALDGAQQSYTIASNDQVTSIETYRTLIIAYRSGAPVMLSDVADVIDGLENSKVGGWYQ
                     NAPSVIIDIQRQPGANVIDTVRRVGLELPRLQRVLPKGVSLAVVQDRTGTIRASVRDV
                     HFTLILSIALVVMVVFIFLHSIRATIIAGVALPLSLIATFGVMWFCGFSLDNLSLMAL
                     T"
BASE COUNT          609 a          995 c          948 g          580 t
ORIGIN      
        1 aggcccttgc caagaaatgg cgcaaagagt ctatcgaaga gatggagcac gcggacaaat
       61 tggttcaccg catcattttc ctcgacggct tccccaacat gcaggtgctt gatccgttgc
      121 atatcgggca gaccgtcaaa gaggtgttgg attgcgatct tgcggccgag atgtccgcgc
      181 gtgcgcttta ccaggaggcg gcaacttatt gccacggcgc taaggattac gtgagtcgcg
      241 atctgtttga aaagttgatg agcgacgagg aagagcacat cgacttcctc gaaacccaac
      301 ttgagctcgt cgcccgcctc gggcttgagc tttacgccca gcaccatatc ggggatgccg
      361 aggcggactg aaccgaacat taggttgcgg cgagccttga actcacgcgg gcgtattcag
      421 ggttgggttt tgcctcgctt cttggcattg tagtctattc ggggggcgga ggctggccag
      481 cgcaacggag acgggcccgc gtgaagaccg accgaataga aaaaacgttc acaacggtac
      541 caaacttacg gcggacacca cggcggtggc agcgccggtt cgtcggtatc gtgatcatcc
      601 ttgcgattgc ggcaagctat ctttggtttt atgcgccaga gtatctgccc gcatatctgg
      661 cccagtaccg ccaagcgcaa attcacccca acgatgttgg cggacggggc gggcgcgggc
      721 tgcgtggtga cgcgccggtg ccagtgctcg ccgcgacggc ggagaatgcc gatgtccctg
      781 tctacttcga tggcgtcggc tcgagccggg cgctcaacac cgtaacggtg cgggcccagg
      841 tcgacggcaa gctgatgagc gtgaatttca aggaaggtca ggatgtcgac cagatttcgt
      901 tctggccgag atcgacgcga ccacctacca ggcgcagtac gaccaggcag ttgccaagaa
      961 ggccgtagat gaagcacagc ttgccaacgc ccgcctcgat ctggagcgct atgcccggct
     1021 gatgcagact aattcggcca cccgccaaca gcatgatact caaagggcgc tggtagcgca
     1081 gcttgaagcc caagcgcagg tggatcaggg cgccatagag aacaccaggg ccattctctc
     1141 ctacaccaag attattgccc cgctcgcagg ccgcaccggc attcgccagg tcgatgccgg
     1201 caatattgtg catgccgccg acacaaccgg gattgtggtg atcacccaga tccggccgat
     1261 cgccgtgatc ttcacgctgc cgcagcagcg cctcgctcag atcaacaagg ccttcgcgcg
     1321 ggggccactg agcgtacagg cgctgggcga cgacaatcgc agcatcgtgg atcgtggcac
     1381 gctcacggtg atcgacaatc aggtcgatca gaccaccgga accgtgaagc tcaaggcgga
     1441 attcccaaac aaagatctgc aaatctggcc gggtcagttc gtcaacgtga agctcctggt
     1501 cgataccctg cgacaggtcg ttgtggtgcc gagcgccgca gtccagcgcg gcccgaacgg
     1561 aacctttgct tacgttgcaa atgaggacaa caccgtcacg gtgcatccgg tgacggtcgt
     1621 ccagcaggat gacgttcagg ccgtgatcgc ggccggcatc gacgacggcg aacgcgtggt
     1681 gacgaccggc ttctcgcaat tgaccgacgg caccaagatc gcgatcggaa cgcaggaaga
     1741 cctgcaacgg cccgccggca gcgagcgccg ccgcggcccg ccgcgcgaaa tcccttcggc
     1801 ccggtccgaa ccgccgtcgc gcgccgaaac cgtcgcccgt ccggctgagc cgccatccaa
     1861 tggcgccgcc acacagccgg cagcgtctcc gaagccatcc cgcgacaccg cgcagcgtcg
     1921 cacccgatcc ggcggcacca cgaccgctac gccatgagcg tatcgtcgcc cttcattttt
     1981 cggccgattg ccacctccct gctcggcgtc gccgtgatgt tgggcgggac tctcggatat
     2041 gcactcttgc cggttgcatc gctgccgcag gtcgattttc cgaccatcca ggtgacgact
     2101 cagttgccgg gcgccaaccc ggaagcggtc gcgtcgctga tcaccgcccc attggaacgc
     2161 cagttcggcc aaattccggc gctcgcgacc atgacgtcgt cgagttccta cggggtgagc
     2221 caaattacct tgcagttcga gcttaatcgc gagattgatg ccgccgcgca ggatgtgcag
     2281 tcggccatca atgcggcggg ctcgacgctg ccgcgcaatc ttccgtaccc gccggtctat
     2341 tccaaggtca atccggccga tgcgccggtg ctgacgcttg cgctgacgtc gccgacgatc
     2401 tcgttgcggc agatgagcga tctcgcagac accctgatag cccagcgact gagcgaagtg
     2461 accggggtcg gccatgtctc ggtccagggc gggctcaagc ccgcgatccg catccaggcc
     2521 gatctcgcca ggctcgcgtc ctatggcatc gcgctggagg acctgcgcac cgcgatcgtg
     2581 gccgccaatg tggccgggcc caaaggggcg ctcgatgggg cccaacagtc ctacacgatc
     2641 gcctccaacg atcaggtcac cagtatcgag acgtatcgaa cgctgatcat tgcctatcgc
     2701 agcggcgctc cggtcatgct gagcgatgtc gctgatgtca tcgacgggct ggaaaatagc
     2761 aaggtcggcg gatggtacca aaatgcgccg tccgtcatca tcgatattca gcgtcaaccg
     2821 ggcgccaatg tcatcgacac ggttcgccgc gtcgggctgg agctgccacg cctacaacgc
     2881 gtcttgccca agggcgtctc cttggccgtg gtccaggacc gcaccggcac catccgggct
     2941 tcggtgcgcg acgtccactt caccttaata ttgagcatcg ccctcgtcgt catggtggtg
     3001 ttcattttcc tgcacagcat ccgggccacc atcattgccg gcgtggcact cccactgtcg
     3061 ttgatagcca ctttcggggt gatgtggttt tgtggcttca gcctcgacaa tctctcgtta
     3121 atggcgctga cc
//
LOCUS       DATILV010000771         5331 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4275623, whole genome shotgun sequence.
ACCESSION   DATILV010000771 DATILV010000000
VERSION     DATILV010000771.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5331)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5331)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5331
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4275623"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1911
                     /locus_tag="VLJ17_18590"
     CDS             <1..1911
                     /locus_tag="VLJ17_18590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HSV25027.1"
                     /translation="DELARYLVPQGPGVRAQADVLIAKGGAAPVVTMLDTAEHLPWAG
                     HTARHALGEIYDLIRRYRTTLMFVNTRSQAEMLFQELWRINDDGLAIALHHGSLDAAQ
                     RRKVEAAMAAGRLQAVVCTSSLDLGIDWGDVDLVINVGAPKGASRLTQRIGRANHRLD
                     EPSRAVLIPANRFEVLECHAAIAAVAEGAQDTPPLRTGAFDVLAQHVLGSACGAPFLP
                     DELFEEVRTAAPFASLTRPDFDAVVDFVATGGYALKVYERFAKIRPGKDGRYRISHPR
                     IAQQYRLNVGTIVEETMIKVRLVRSGRGGHGPTGAIARGGRILGELEEYFIEGLTPGD
                     TFVFSGEILRFEALAEDEAYVSRTHSDDPKVPAYAGGKFPLSTYLAARVRALISEPHA
                     WLALPAQVREWLGIQQWRSRVPLPGQLLVETFPRADKNYLVCYPFEGRLAHQTLGMLL
                     TRRLERARLRPLGFVANEYALAVWGLGDPAFAIRNGKLSLAQLFDQDMLGDDLEAWLA
                     ESALMKRTFRQCAIIAGLIERRAPGEEKNKRQMTISTDLVYDVLRRHQADHILLRAAR
                     QEAAVGLLDIKRLSAMLSRIKGHIVHQTLDHVSPLAVPVLLEIGRESVYGEASEQLLA
                     EAEAALVNEAMR"
     gene            2073..2780
                     /gene="pdeM"
                     /locus_tag="VLJ17_18595"
     CDS             2073..2780
                     /gene="pdeM"
                     /locus_tag="VLJ17_18595"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response
                     endonuclease PdeM"
                     /protein_id="HSV25028.1"
                     /translation="MPSQQEGEGEITVAGVTLVADLAGALYWPDEQLLVVSDLHLEKG
                     SSFATHGILLPPYDTSSTLERLAGVLSRHATRTVIALGDNFHDQGGPGRLAADNRAKL
                     FDLQRGRDWVWIAGNHDPDPSDRIGGVFASSVVLGPLLFCHQPTLQASPGEIAGHLHP
                     VARIHRRGHTLTRRCFVSDETRLVMPAFGAYTGGLNIRHAAFVPVFGALAFTAHLLGK
                     RRLYAFAAQRCLPDSCS"
     gene            3165..3998
                     /locus_tag="VLJ17_18600"
     CDS             3165..3998
                     /locus_tag="VLJ17_18600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25029.1"
                     /translation="MSYRSSICAIALATALLAAPSAAQVVDFGKYPDFKGQWIRAGGT
                     PNNWIALAGPPPLTPEYQKIWSDIQADLKAGGPGNWPSTFCIPAGMPAMMSFYDPMEM
                     IVLPEITYILISHNDDSYRRIYTDGRAWPTDAALTFAGYSIGQWIDEDGDGKYDVLEV
                     ETRFLKNPRGYDISGIPFHSDNQTVIKERIYLDKADRNTLYDQITVIDHAMTRPYSKI
                     QKATRNPNPRPVWFSDVCSESNTHVRIENENYFRSADGKLMPSKKNQAPPDLSYFKQT
                     R"
     gene            complement(4018..4815)
                     /locus_tag="VLJ17_18605"
     CDS             complement(4018..4815)
                     /locus_tag="VLJ17_18605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006615251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02186 family protein"
                     /protein_id="HSV25030.1"
                     /translation="MNRNSRPRILIACVVASFLLVVSALPAGAERLVSSLSSHIVRIT
                     SNFTGVELVLFGTVENDQAIIPRIGGYDIVTTVTGPRQSVVTRRKERMFGIWVNAESR
                     SFVEVPSYLEVLATRPFESIADAETLRRQQIGIANTLLPERIGPDIADVIPNDQFRQA
                     LVRIKRDRNLYGEITNGVTFLTPTLYRASIFVPAEAPVGNYDVDVKLFAAGAVIARTN
                     SAFEIVTVGFERFIASTAVDYGLAYGVATAMMAMMTGWFASIVFRRD"
     gene            complement(4812..>5331)
                     /locus_tag="VLJ17_18610"
     CDS             complement(4812..>5331)
                     /locus_tag="VLJ17_18610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HSV25031.1"
                     /translation="MLRARQGKPVELRRPGSHTWVHGLPLKIRFKQSKIYVSAIPVCA
                     IGLIMGFIGAIMGFGGGFLLVPMLIYFLRVPTNVVIGTSMVLTLITMASATILHAATN
                     HLVDAVLALILMVGGVTGAQFGARAGQRMRSERLRLLLGILVLAVGSRFAFDLIVAPD
                     DVYSIRIIGDAQ"
BASE COUNT         1029 a         1664 c         1610 g         1028 t
ORIGIN      
        1 gatgaacttg cccgctatct ggtgccgcag ggtccgggcg tgcgggcaca agccgacgtc
       61 cttatagcca aaggcggcgc cgcgcccgtc gtcactatgc tggacactgc cgaacacctg
      121 ccgtgggccg ggcatacggc gcgccacgcg cttggcgaga tctacgacct catccggcgc
      181 tatcgcacga cgctgatgtt cgtcaatacc cgcagccaag ccgagatgct atttcaagag
      241 ctgtggcgca tcaacgatga tggccttgcg attgcgctgc accacggctc gctcgacgcc
      301 gcccagcgcc gcaaggtcga agctgccatg gcagcgggcc ggctgcaggc cgtggtgtgc
      361 acatcctcac tcgatctcgg cattgactgg ggcgatgtcg atctggtcat caacgtgggc
      421 gcccccaagg gcgcgtcgcg actgacccag cgcatcggcc gcgccaacca tcggcttgat
      481 gagccgtcgc gtgcggtgct gattccggcc aatcggttcg aggtgctgga gtgtcacgcc
      541 gccatcgcgg cagtcgcgga aggtgctcag gataccccgc cgctacgcac cggcgcgttc
      601 gacgtgctgg cgcaacatgt gctcggctcc gcctgcggcg cgcccttttt gcccgatgaa
      661 ctcttcgagg aagtcaggac ggcggcgcca ttcgccagcc tgacgcggcc ggatttcgat
      721 gccgtggtgg atttcgttgc caccggtggc tatgcgctca aagtctatga gcggtttgcc
      781 aagatccggc ccggcaagga tgggcgctac cgcatcagcc atccacgcat cgcccaacaa
      841 tatcggctca acgtgggcac catcgtggaa gagactatga tcaaggtgcg gttggtgcgg
      901 tcgggccgcg gcggccacgg gccgactggc gcaatcgcgc gcgggggccg catcctgggc
      961 gagttggagg aatatttcat tgaagggctc acgccgggcg acaccttcgt gttttccggc
     1021 gaaatcctgc gattcgaagc gctggcggag gacgaggcct atgtgtcacg tacccattcc
     1081 gacgacccca aggttccagc ctatgcgggc ggcaagtttc cgttgtcgac ttatctggcg
     1141 gcgcgtgtgc gggcgctgat ttccgagccg cacgcctggc tggcgctgcc cgcacaagtg
     1201 cgcgaatggc tcggcattca gcaatggcgt tcccgcgtgc cgctacccgg tcaacttttg
     1261 gtcgaaacct ttccccgcgc cgataagaac tatctggtgt gctacccgtt tgaggggcgg
     1321 ctcgcccacc agacgctcgg catgctgctc acccggcggc tcgagcgcgc gcggctgcgt
     1381 cccctcggct tcgtcgccaa cgaatacgcg cttgcggtct ggggcctcgg cgatccggcg
     1441 ttcgcgatcc gcaatgggaa attatcgctc gcacagcttt tcgatcagga tatgctgggc
     1501 gacgacctcg aagcttggct cgccgagtcg gcgctgatga agcggacatt tcggcaatgc
     1561 gccatcattg cagggctgat cgagcgccgg gctcccggcg aggagaagaa caagcgtcaa
     1621 atgaccatct cgacggatct cgtctacgac gtgctgcgac gccatcaggc cgatcacatc
     1681 ctgttgcgcg cagcgcgcca ggaagcggcc gtagggcttc tagacatcaa gcggctcagc
     1741 gccatgctga gtcgcatcaa ggggcatatc gtccaccaga cgctcgatca tgtttctcca
     1801 ctcgccgtgc cggtgctgct ggagatcggc cgcgaatccg tctatggcga agcatccgag
     1861 cagctgttgg ccgaggccga ggcggctctc gtgaacgagg ccatgcggtg agaagaacga
     1921 tcgaaggatc agccgactct cctgaggcgg tcgcatgcgg ggcggcgatc gcttctcact
     1981 ccccccttgt gggggacggt cggggtggtg ggtcgggaag ttatggcacc gcgggccccc
     2041 tttgtacgcc ccccacccaa gaaaggcacc ctttgccctc ccaacaagag ggagagggag
     2101 agatcacggt cgctggcgtt accctggtgg ccgaccttgc gggcgcgctc tattggccgg
     2161 acgagcagct cctcgtcgtt tcggatttgc atcttgaaaa aggatcatcc ttcgcgacgc
     2221 acggcattct gctgccgccc tatgacacct cgtcgacgct tgagcgactc gccggggtgc
     2281 tgtcgcgcca cgcaacacgc accgtcatcg cacttggaga taatttccac gatcagggcg
     2341 ggccggggcg ccttgcggct gacaaccgcg ccaaattatt tgatctgcaa cgcggtcggg
     2401 attgggtgtg gatcgcaggc aaccacgatc ccgatccctc cgatcgtatc ggcggcgttt
     2461 ttgccagttc ggtggtgctt ggcccgctgc tgttttgcca ccagccgacg ctgcaagcga
     2521 gcccgggcga aatcgccggc cacctgcatc ccgtggcacg catccaccgg cgcgggcaca
     2581 ccctcacgcg acgttgtttt gtcagcgacg agacgcgctt ggtgatgccg gccttcggag
     2641 cgtacacggg cgggctcaat atccgccatg ctgcgtttgt tccggtattc ggtgcgcttg
     2701 cctttacggc gcatctattg ggaaagcgac ggctctatgc attcgcagca cagcgctgcc
     2761 tcccagacag ctgttcctag ctgcacggta aatgcagcac gtgttggcgc ggatgtcgcc
     2821 ttgatccact tcacaaccgc gcatctctgt gggctctgcg ttctcgaatg gcacaatgcc
     2881 gccagcgacc ttcgtcgctt gggtttgcac cgtagaaccc aatcgtcgcc actggccaac
     2941 cccgcgtgcc ctggctgaac gacatgtttg tcgttgctcg ggaccgtgcg gttggttgtc
     3001 gaccggcgtc tttgcgactt cgccgcacct gcggtggcgc cgccggtgtc ctgataaagc
     3061 ggtggaagaa gaccgtcctt tcgcctaaaa ttttccgatc gaaagctttg atctttgatg
     3121 cggcggcgcg gtatgcccat cgagcgatcc tatggagaat gcccatgagt taccgaagct
     3181 caatctgtgc gattgcattg gcgacagcgc ttctggcagc gccgtccgcc gcccaggtgg
     3241 ttgattttgg caagtatcct gatttcaagg gtcaatggat tcgagccggc ggcactccga
     3301 ataattggat tgcgctggcg gggccccctc cgctcactcc cgaatatcag aagatatgga
     3361 gtgatattca ggctgacctg aaggccggcg gacccggcaa ttggccatcg acgttctgca
     3421 tcccggccgg catgccggcg atgatgagct tctatgatcc aatggaaatg atcgtcctgc
     3481 cggagatcac ctacatcctg atcagccaca acgacgattc atatcgacgg atttataccg
     3541 atggccgcgc gtggccgacc gatgccgcgc ttactttcgc cggctactcg atcggccagt
     3601 ggatcgacga ggacggcgac ggcaagtacg acgtgctcga ggtcgagacg cgtttcctca
     3661 aaaacccgcg aggttacgat atctcaggta tcccattcca cagcgacaat cagaccgtca
     3721 tcaaggagcg gatctatctc gacaaggccg atcgcaatac cctttacgac cagatcaccg
     3781 tgatcgatca tgcgatgacg cgaccctact ccaagatcca gaaggccacc cgcaatccaa
     3841 atcctcgtcc ggtgtggttc tcggacgttt gctcggaaag caatacgcat gtccgcatcg
     3901 agaatgaaaa ctatttccgc agtgcggatg ggaagctgat gccatccaag aaaaatcagg
     3961 cgccaccgga cttgagttat ttcaaacaaa cgcggtagcg ataaccttgt tcgtaggtca
     4021 gtcccgcctg aatacaatcg acgcaaacca gcctgtcatc atcgccatca tggcggtagc
     4081 caccccgtag gcaaggccgt aatccaccgc tgtgctggcg atgaaacgtt cgaagccgac
     4141 cgtcacgatt tcgaacgccg aattggtgcg tgcgatcacg gcaccggcgg cgaacaattt
     4201 gacatcgacg tcgtaattcc caaccggcgc ttcagcaggc acaaaaatgg aagcgcgata
     4261 gagggtcggc gtcaggaacg tcaccccgtt ggtgatctcg ccataaaggt tgcggtcgcg
     4321 cttgatgcgt acaagggcct gccgaaattg atcgttcgga atcacgtcgg caatgtccgg
     4381 gccgatccgc tctggcagca acgtgttggc aatgccgatc tgctgtcgac gcagcgtttc
     4441 ggcatcggcg atgctttcga acggccgcgt cgccagcacc tcaaggtagg acggcacctc
     4501 cacgaaactt cgcgattccg cgttgaccca gatgccgaac atccgctcct tgcgccgcgt
     4561 caccacggac tgacgcggac cggtcactgt cgtcacgatg tcataaccgc cgatgcgcgg
     4621 gatgatcgcc tggtcgttct caacggttcc gaacagaacc agttcgacgc cggtaaaatt
     4681 cgacgtgatg cggacgatat ggctcgacag cgaggacacc agacgctccg cccctgccgg
     4741 cagtgctgaa accacaagca gaaaggatgc caccacacag gcgatcaaaa tacgcggccg
     4801 ggagttgcgg ttcattgcgc gtccccgatg atgcggatcg agtagacatc gtctggcgca
     4861 acgataaggt cgaacgcaaa ccgcgatccg acagccagca ccagaattcc gagcaggagg
     4921 cgcaggcgtt cgctccgcat cctctgaccc gcccgtgccc cgaattgagc acctgtgacc
     4981 cctcccacca tcagtatgag cgccagcacg gcgtcgacca agtggttggt tgcggcgtgc
     5041 aggatggtgg cggacgccat agttatcaag gtgagcacca tcgaggttcc gatgaccaca
     5101 ttcgtcggca cgcgcaagaa atagatcaac atcggcacca gcagaaagcc gccgccaaag
     5161 cccatgatgg cgccgatgaa tcccatgatg agcccgatgg cacacaccgg aatggcggag
     5221 acgtagatct tcgattgctt gaatctgatc ttgagtggca aaccatggac ccaggtgtgg
     5281 ctgccgggcc ggcgcagttc cacgggcttg ccctgccgcg cgcgcagcat c
//
LOCUS       DATILV010000772         2484 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_958394, whole genome shotgun sequence.
ACCESSION   DATILV010000772 DATILV010000000
VERSION     DATILV010000772.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2484)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2484)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2484
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_958394"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..433)
                     /locus_tag="VLJ17_18615"
     CDS             complement(<1..433)
                     /locus_tag="VLJ17_18615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1697 domain-containing protein"
                     /protein_id="HSV25032.1"
                     /translation="MTKYVALLRAINVGGTGKLPMSDLVAICRDVGFARVETYIASGN
                     VVFESKAAAPRVKAELEARLRTYARKPIGVIVRTASEMRAILNANPFPKADPKFTYAI
                     FLDEPPPSEVLALARGRNDEDICLGKREIFNYNPSVMGRSKL"
     gene            complement(832..1461)
                     /locus_tag="VLJ17_18620"
     CDS             complement(832..1461)
                     /locus_tag="VLJ17_18620"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HSV25033.1"
                     /translation="MNAYDKQGPNINSIITINPNALAEADKLDAALHLSDLVGPLHGA
                     TILVKDEVDTAGMPTTLGIVVFKDYRPPKDAFVIDKLRKAGAIILGKTTLSEFAAGDT
                     YGSTFGVTRNPYDLDRTVGGSSGGSGAALAANFSTVTIGEETVASIRRPGAWNAAVSL
                     RPTPGLVSRTGMWDGYPTAHAQMGPMARTGVTNWREPGRVLLQIGPTNE"
     gene            complement(1628..>2484)
                     /locus_tag="VLJ17_18625"
     CDS             complement(1628..>2484)
                     /locus_tag="VLJ17_18625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013214475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSV25034.1"
                     /translation="ERNNIEVLKNLPVPLPGALTHAGEGAAVTALPLRVLADFNLSEG
                     PNQVSRENGKRRVVVTADVRSRDIGSAVAEAQAKIAQKVTLPPSYWLTWGGQFENFAT
                     ARQRLIIVVPVCFALIFLLLLGALGSWRDALLVFSAVPLALTGGVAALWLRDMTFSIS
                     SAVGFIALSGVAVLNGLVMLTFIRQLVEEGVPRDEAIYRGALTRLRPVVMTALVASLG
                     FVPMAIATGTGAEVQKPLATVVIGGLISATLLTLLVLPALYARFSGTAMRSKQKPRFA
                     KAVATAAE"
BASE COUNT          474 a          765 c          754 g          491 t
ORIGIN      
        1 tcaatttcga gcgacccata acactcgggt tgtagttgaa tatttctcgc ttaccgaggc
       61 atatgtcctc gtcgttccgc ccacgtgcaa gcgccaggac ttcggacggt ggtggctcat
      121 cgagaaatat tgcataggtg aattttgggt cagcctttgg gaatgggttg gcgttgagaa
      181 tggcccgcat ctcggaagcg gtgcgcacga taaccccaat gggtttgcgg gcgtaggttc
      241 gtaaacgagc ctcaagttcg gccttgaccc ttggggctgc ggctttgctt tcaaaaacga
      301 cgttgccgct cgcgatgtat gtctcgaccc gagcaaagcc aacgtcacga catatggcga
      361 caaggtccga catggggagc tttcccgttc caccaacgtt aatggcgcgc agaagagcta
      421 cgtactttgt catgttgcgc ccatagcaca cgcgttgtgg attttccgcg tgcccgactt
      481 cacccaaacg cgatcagtcc aaccgattga acaaaccggg cactgggttg acgtcgcgtg
      541 tgttaccgct cttggcccct gcgcttcggt tacccggact tgcgttttag catccgcacg
      601 cacggcacag ctatgtgggc cagaagccct ttccttcccc cggatgcgtc gagggaaatg
      661 tgtcctattc catcaaagtc agatggcgaa tttcgtggtg ggcccgggag gactcgaacc
      721 tccaaccaag cggttatgag cgcgccggat gaaccggaaa attcttgaaa actcagcttt
      781 tttggcatga tcgaacgcgt ttgtttctgt tcggttcgcg gatatgattg gttattcatt
      841 ggttggacca atctgcaaaa ggacacgtcc aggctcgcgc cagttggtga cgccggtgcg
      901 cgccattgga cccatctggg catgcgccgt cgggtaaccg tcccacatgc cggtacggct
      961 caccaggccc ggcgtcggcc tcaggctcac cgccgcattc caggcgcccg gccgccggat
     1021 cgatgcgacg gtttcctcac cgatcgtcac cgtagagaaa ttcgccgcca gcgccgcgcc
     1081 cgagccgccg gacgaaccgc cgaccgtgcg atcgaggtcg tagggattgc gcgtcactcc
     1141 gaaggttgat ccgtaggtat cgcccgcggc gaattcggag agcgtggtct tgcccaggat
     1201 gatcgcgccc gccttgcgca acttatcgat gacgaaggcg tccttgggcg gccggtagtc
     1261 tttaaacacg acgatcccga gcgtggttgg catgcctgcc gtgtcgacct catccttcac
     1321 caggatcgtt gctccgtgca gcgggccaac gagatcggaa aggtgaagcg ctgcgtcaag
     1381 cttgtcggcc tccgcgagcg cgttcgggtt gatggtgatg atggaattga tgttggggcc
     1441 ttgcttgtca taggcgttga tccgatccta tcaaagcggc ccgcgttgtg aagtccctca
     1501 tttctttgtg gtcggccgga gcgcgtcggt gaattgattg aatgggacag agatacccga
     1561 tgcgaagcta ttggccgacc atgacgcgac tgatccgcga acgaggaaca ctccgccgaa
     1621 gcctggttca ctccgcagca gttgcgacgg ctttcgcaaa tcggggcttc tgcttgctac
     1681 gcattgctgt tccggagaag cgtgcataga gcgccggcag cacgagcagc gtcagcaagg
     1741 tggcgctgat caggccgccg atcacgacag tcgccagcgg cttctgcacc tccgcccccg
     1801 tcccggtcgc aatcgccatc gggacgaagc ccagcgacgc caccagcgcc gtcatcacca
     1861 ccgggcgaag gcgcgtcagc gccccccggt agatcgcctc atcgcgtggc acgccctcct
     1921 cgacgagttg ccggatgaac gtgagcatga ccaagccgtt gagcacggcg acgcccgaca
     1981 gggcgatgaa ccccaccgcc gaggagatcg aaaacgtcat gtcgcgcagc cataaagccg
     2041 caacgcctcc ggtcagcgcc agcggcacgg cgctgaacac caaaagcgca tcccgccacg
     2101 accccaatgc tcccaacaac agcaggaaga tcagcgcaaa gcacaccggt accacgatga
     2161 tgaggcgttg gcgcgccgtg gcgaagtttt cgaactgccc gccccaggtc agccaatagc
     2221 tcggcggcag cgtgactttc tgggcgatct tggcctgtgc ttccgcgacc gctgagccga
     2281 tgtcgcggct gcgcacgtcg gcggtcacga cgacccgccg tttgccgttc tcgcggctga
     2341 cctggttcgg cccttcggag aggttgaaat cggcgagcac gcgcaacggc agcgcggtga
     2401 cggccgcgcc ttcgccggca tgcgtcaaag ccccgggcag cggaaccggc aggttcttga
     2461 ggacctcgat gttgttgcgc tcga
//
LOCUS       DATILV010000773         4086 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4529445, whole genome shotgun sequence.
ACCESSION   DATILV010000773 DATILV010000000
VERSION     DATILV010000773.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4086
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4529445"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..498
                     /locus_tag="VLJ17_18630"
     CDS             <1..498
                     /locus_tag="VLJ17_18630"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195289.1"
                     /note="adds enolpyruvyl to UDP-N-acetylglucosamine as a
                     component of cell wall formation; gram-positive bacteria
                     have 2 copies of MurA which are active; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HSV25035.1"
                     /translation="ARPELLRAALDVLTQAGAEIVATNAGIRVARNGSGIAPVEVTTA
                     PFPGFPTDLQAQLMALMTRAKGTSYITETIFENRFMHVQELVRLGARIHLDGETATIE
                     GSGRLKGAPVMATDLRASVSLVIAALAAEGETMVNRVYHLDRGFERLEDKLAACGAQI
                     SRISG"
     gene            complement(726..1463)
                     /locus_tag="VLJ17_18635"
     CDS             complement(726..1463)
                     /locus_tag="VLJ17_18635"
                     /inference="COORDINATES: protein motif:HMM:NF024934.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HSV25036.1"
                     /translation="MKAQTVQRAAFPQDFSHPSLRRDESAQGVVRSATVVPLRPAEEG
                     HRQRFGEHVHLFREGDTAKRIHELVDGAVMLYKLLPDGRRQVVELIGPGDVFGISTTA
                     AYECSAETLVSGQVIAYDRAVVERSPELFRRLSARIQAQFCAMHEHAVLLGRKSALER
                     VASFIMKCVVGRGGRGGPVPCGSENSINVRLGMTRQEMADYLGLTIETVSRVFSELRR
                     RGIVTIDRQEHVLVQDIGRMCRLTGTD"
     gene            complement(1662..2021)
                     /locus_tag="VLJ17_18640"
     CDS             complement(1662..2021)
                     /locus_tag="VLJ17_18640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013164932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV25037.1"
                     /translation="MSIHLLEDDAGVNESLALLLTHFNLHVIRHGSAESLFRAQPPSA
                     DDIVFVDLKLPGVSGAQTIRWLQSLKQPPHIVVISGQSQATIRSELAGVDVVSVLRKP
                     LDQETVLRELRRIGFDL"
     gene            complement(2176..2799)
                     /locus_tag="VLJ17_18645"
     CDS             complement(2176..2799)
                     /locus_tag="VLJ17_18645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008962994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV25038.1"
                     /translation="MKEIGTAPEHIYVVDDDPAVRDALSLVLTLEGFYVSSFAEGNSF
                     LVAVRRQQPQCIILDVHMPGRSGIDILKELRDQHCTVPLFIISGQGDIPMAVDAIKNG
                     AFDFIEKPFNAETLVTRVRDAIAATARVKAPASSGLAARFPGRDLLTPREYQVLELIA
                     NGASNKEAGRQLGISPRTIEVHRSRIMEKLGAKNTVDLVHIVLSDRD"
     gene            complement(2796..3932)
                     /locus_tag="VLJ17_18650"
     CDS             complement(2796..3932)
                     /locus_tag="VLJ17_18650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSV25039.1"
                     /translation="MSFEPLLLSVLDTAVDGIIIIDEHGRMLVYNQACERLFGYTAAE
                     ALGQNVGLIMPDEFSHHHDHYISDYLNTRQRKVIGTGREVKAQHHDGTVFPVELSVGE
                     AATSEGCRFIGIIHDLRPRYANEERLNHLQANMVHMARVSTMDEMGAALAHELNQPLT
                     ALMLYLQAMERAAGRLDSPNPIPESVLAVLRKAMNEAERASNILQRMRQFVEKRDPRR
                     RLVDINPLVEDALELTQFGTRPGLTRINCDFEADLPQVLVEPMQIQQILVNLTRNALE
                     AVKDRPKPEIAITTHRTEKGVAIEVADNGPGIRAGALPDLFKAFASSKNQGLGLGLAI
                     SRTIAQSHGGTLEVDPGGSGRGARFTLSLPLTRPGVEDSKDGPR"
BASE COUNT          821 a         1223 c         1218 g          824 t
ORIGIN      
        1 gctcggccgg agctgttacg agcggcgctt gacgtactca cccaagccgg cgccgagatc
       61 gtcgccacga atgccggcat ccgggtcgcc cgtaacggct ccggcatcgc gccagtcgag
      121 gtgacgacgg cgccgttccc gggctttccg accgatctac aggcgcagct catggcactg
      181 atgacgcggg cgaagggaac ctcgtacatc accgaaacca tctttgaaaa ccgcttcatg
      241 cacgttcagg agctggtgcg gctcggcgcc cgtatccatc ttgatggcga aaccgccacc
      301 atcgagggat ccggccggct caaaggcgct cccgttatgg caaccgactt gcgcgcttcg
      361 gtttccctcg tcatcgcggc gcttgccgcg gagggggaga ccatggtcaa tcgcgtctat
      421 cacctcgacc gcggcttcga acgcctcgaa gataagcttg cggcctgtgg ggcacagatt
      481 tcccgcatca gcggctgagc gctcaatcat tcgcggtcac gtggatgagc gtttcgtgtg
      541 gaactgccga taccatcaag ggtctgaagg tttaggccgc aagggaagcc gagtcgtagc
      601 aggcatggcg ctcaggatat gaaaaaaagg gcgccttgcg tccagcacgg cgcccagtgt
      661 gagagaattg ctagggagga gttcgcaagt ctctcctcat ttgtcgcggc agccctgccg
      721 gcggttcaat cggttcccgt cagccggcac atgcggccga tgtcttggac aagcacatgc
      781 tcctgccggt cgatcgttac gatgccgcgt cgccgcaatt ccgagaagac gcgcgatacc
      841 gtttcgattg tcaggcccag atagtcggcc atctcttggc gtgtcatgcc gagtctcaca
      901 ttgatggaat tttcgctgcc gcacggcacc gggccgccac gcccgccgcg tcccaccacg
      961 catttcataa tgaaacttgc cacccgttca agcgccgatt tcctgccgag cagaacggca
     1021 tgctcatgca tggcgcagaa ctgagcctga attcgcgcac tgagacggcg aaacagttcg
     1081 ggcgatcgct cgacgaccgc gcgatcgtaa gcaatcactt ggccagacac caacgtctcg
     1141 gcggagcact cataggccgc ggtggtcgag attccgaaga catcgccagg gccgatcagt
     1201 tctacgactt ggcggcggcc gtcgggaagc agcttgtaaa gcattactgc cccatcgacg
     1261 agctcgtgga tgcgcttggc ggtgtcaccc tcgcgaaaca gatggacgtg ctccccgaaa
     1321 cgctgtcggt gtccctcttc tgcgggacgc agcggcacga ccgtggcact ccggacaacg
     1381 ccttgcgccg attcgtcgcg tcgaagagaa ggatgagaga agtcctgcgg aaacgcagcg
     1441 cgttgaaccg tctgagcttt catggcggat tgcctcgctt tggagtgccg gtttgattga
     1501 gtaagctagc gaaagctgca aacggcgaaa tcgggcaggt tgcgtacgca acactgcgta
     1561 gagcgccaca tcgcgtcggc gctgggtgcc cgattgttgc cagattgttg tcttgcagga
     1621 acgaacgaac gcgtaaacta atcgggtttc gtcaacgacc gctaaaggtc gaatccgatt
     1681 cggcgcagct cgcgcaacac ggtctcctga tcgagtggtt tgcgcaacac gctgacaaca
     1741 tctacgccgg cgagctccga ccggatcgtc gcctgcgact ggcccgaaat gaccacaatg
     1801 tgcggcggct gcttcagcga ctgcagccag cgaattgttt gggcaccgct cacaccgggc
     1861 agcttcagat cgacgaacac gatatcgtca gcgctaggtg gttgcgcgcg gaacaggctt
     1921 tcggcgctac catggcggat cacatgcaaa ttgaaatggg ttagcagcaa cgcgagggat
     1981 tcattgacgc ccgcatcatc ctctagcagg tggatcgaca tggtccggcc ttgaggttgt
     2041 gcgacagcca atgtgcactg tttcgaaggt gcggttaagt tgcttaattg ccctgctgac
     2101 gcgtgaaatc cgcaaatctg cctacgtagg aataccgact cactacgcag gtacggcttt
     2161 aaatttgggg gggactcaat cgcgatccga gagcacgatg tgcacgaggt cgacggtgtt
     2221 tttagctccg agcttttcca tgatgcggga acgatggact tcgatcgtgc gcggactgat
     2281 tcccagctgg cggccggcct ccttgttgga agcaccgttg gcgatcagct caagcacctg
     2341 atattcccgg ggcgtcagca agtcgcgacc cggaaatcgg gccgcgagcc cggagcttgc
     2401 gggtgccttc acgcgtgccg ttgccgcgat ggcgtcgcga acacgggtga cgagcgtttc
     2461 ggcattgaag ggcttctcga tgaaatcgaa cgcgccgttt ttgatggcat ccaccgccat
     2521 cgggatatcc ccttggccgg aaatgataaa gagcggaacc gtgcaatgct gatcgcgcag
     2581 ttccttgagt atatcgatcc cggatcggcc cggcatgtgg acatccaaga tgatgcactg
     2641 aggttgctgc cggcgcaccg ctaccaggaa cgaattgcct tccgcaaagc tggaaacgta
     2701 gaagccttcg agggtcaaca ccagggacaa cgcatcgcgt accgcgggat cgtcatcgac
     2761 gacatagatg tgttcgggag ctgtcccaat ctctttcatc tcggaccgtc cttgctatct
     2821 tccacgcccg gccgcgttag cggcaagctc aaggtgaaac gcgcaccgcg tccgcttcca
     2881 ccgggatcga cttcaagcgt gccgccatga ctttgtgcga tcgttctaga aatggccaga
     2941 cccagtccaa gcccctggtt cttggacgag gcaaacgctt tgaacaaatc tgggagcgct
     3001 ccagcccgaa ttcccggacc gttgtccgcg acctcgatcg cgacgccttt ctcggtgcga
     3061 tgggtcgtga tggcgatttc gggtttgggc cggtccttta cggcctccag cgcattacgc
     3121 gtaaggttga ccaagatctg ctgaatctgc atcggctcga cgagcacttg cggcaaatcc
     3181 gcttcgaaat cgcaattgat tctggtcaaa cccggacgcg ttccgaattg ggtgagttcc
     3241 aacgcgtcct cgaccaaggg attaatatcc accaggcgtc gccgcggatc gcgcttttca
     3301 acgaattgac gcatgcgctg gaggatattg ctggcgcgct cggcttcgtt catcgccttg
     3361 cgcaaaaccg ccagcacgct ctccggaatc gggttggggg aatccagccg cccggcggcg
     3421 cgctccatcg cctggagata aagcatcagg gctgtcagag gttgatttag ttcgtgcgcc
     3481 agcgctgcgc ccatctcgtc catggtcgat acccgcgcca tgtgaaccat attggcctgg
     3541 aggtgattaa gacgctcctc gtttgcgtag cgcgggcgca ggtcgtgaat aataccgata
     3601 aaccggcatc cctcggaggt cgccgcctcg ccgaccgaca actcgaccgg aaagacggtg
     3661 ccgtcgtgat gctgagcctt tacctcgcgg ccggtgccga tgaccttgcg ctgtctggta
     3721 ttcaggtagt ccgagatgta atgatcatga tggtgcgaaa actcgtccgg catgattagc
     3781 ccgacgtttt gccccaacgc ctcagcggct gtgtatccaa acagccgttc gcatgcctga
     3841 ttgtaaacca gcatgcggcc gtgctcgtcg ataatgatga tgccgtcgac ggcggtgtcg
     3901 agcacgctca ataacagcgg ttcgaacgac atccgtttca ccgtcccgct ttcaccgtcc
     3961 cgctcaaatg gataccccga tggggcggtg gcacaccctc gacggcctac aaatgacacc
     4021 cacatataac agcgccttgg ccgggtctcg caagagccgg agcgaaaagc tgccgcagtg
     4081 gcgggt
//
LOCUS       DATILV010000774         1903 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3507329, whole genome shotgun sequence.
ACCESSION   DATILV010000774 DATILV010000000
VERSION     DATILV010000774.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1903)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1903)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1903
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3507329"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..337
                     /locus_tag="VLJ17_18655"
     CDS             <1..337
                     /locus_tag="VLJ17_18655"
                     /inference="COORDINATES: protein motif:HMM:NF012273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glutathione binding-like protein"
                     /protein_id="HSV25040.1"
                     /translation="SFWAMLEMEELLLDLLQHRAMLPEFARDASYAERDELLLKKPLG
                     VLNDALAGHDYLVGNSFTVADLNVASILVWGKMARLDLLNHPEVARWLDACLARPTYG
                     RLRERASRK"
     gene            complement(563..>1903)
                     /locus_tag="VLJ17_18660"
     CDS             complement(563..>1903)
                     /locus_tag="VLJ17_18660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012455660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1182 family transposase"
                     /protein_id="HSV25041.1"
                     /translation="DSFVDALDLADLGFEGVEPAATGRPAYHPSVLLKLYIYGYLNRV
                     QSSRRLEREAGRNLEVIWLLGRLVPDDKVIADFRKDNGPAIRRVCANFVNLCRQMGLL
                     AKASVAIDGSKFKAVNNRDRNFTRGKIDRRRAQLEESVARYLSQLDTADRQEPSDVLV
                     LKTTRLKEKLDKLKEEMGKLAAYEKQMLASPDGQISLTDPDSRSMATSGRGSGVVGYN
                     VQVAVDTVNHLIVTHEVTNTGSDRSQLANVAREAKAVLQVDKLEAVADRGYFNGEEIL
                     ACEQAGICVTLPKPMTSGAKSEGRFGKQDFVYMPEEDVYRCPAGEKLKFHYANEEHGQ
                     KMRRYWTNACKTCAIKDQCTTGKERRITRWEHEHVLEAVQQRLDQDPQAMRRRRETVE
                     HPFGTLKMRMGATHFLMKTLPKVASEMALSVLAYNLTRVMNIVGTRALLAAIRA"
BASE COUNT          347 a          571 c          556 g          429 t
ORIGIN      
        1 gagcttctgg gccatgttgg aaatggaaga attgctactc gatttgttgc agcatcgcgc
       61 aatgctgccc gaatttgcgc gcgatgcttc atatgcagaa cgcgacgagt tgttgctaaa
      121 aaagccactc ggcgtactca atgacgcctt agcggggcac gattatttgg taggcaatag
      181 ctttactgtc gccgatctca acgtggcgag cattctcgtc tggggcaaga tggcccgact
      241 ggatctattg aatcatcccg aagtcgcacg gtggcttgat gcctgtttgg cacggcccac
      301 ctacggtcga ttgcgtgagc gagcaagccg caaatgatca gtggcattgg gtgccatgaa
      361 tggcgcatgt ccgctctggg tcttggttgc gtgataacgc gctgatgcag ttcgcgaccg
      421 tccacgatcc ggtcaatgta gtccgacacc gccgatctga gcaatttttt cctgttggac
      481 gatcaggacc atctctgagt catcgtgggg aatgctgggc aaggcctgac tcgagatcgg
      541 cacgcaatgg gggcctccac actcacgccc tgatcgctgc cagcaacgcc cttgtaccga
      601 cgatattcat gacgcgcgtc agattgtagg cgagcacgct gagcgccatc tcgctcgcaa
      661 ccttcggcag cgtcttcatc aggaagtgcg tcgcgcccat cctcatcttg agcgtgccga
      721 agggatgctc aaccgtctcg cgccggcggc gcatggcttg ggggtcctga tccagccgct
      781 gctgcacggc ttcgagaacg tgctcgtgct cccatcgcgt gatgcggcgt tctttgcctg
      841 tggtgcactg atccttgatt gcgcaggtct tgcaggcgtt cgtccagtag cggcgcatct
      901 tctgcccgtg ttcctcgttg gcatagtgga atttgagctt ctcgccggcg gggcagcgat
      961 agacatcctc ctccggcata tagacgaagt cctgcttacc gaagcggcct tccgacttcg
     1021 cgcccgacgt catcggtttg ggcaaagtca cgcagatgcc tgcctgctcg caggccagga
     1081 tctcctcgcc attgaagtag ccgcggtcgg cgacggcttc gagtttatcg acttgcagaa
     1141 cggccttggc ttcccgcgcc acgttcgcta gttgtgagcg atccgagccg gtattcgtca
     1201 cttcgtgcgt cacgatcaga tggttcacgg tgtcgaccgc gacctgcaca ttgtagccga
     1261 cgacgcccga gccacgccca ctcgttgcca tcgaccggct gtcgggatca gtgagcgaga
     1321 tttggccgtc gggcgaggcc aacatttgct tctcgtaggc tgcgagcttg cccatttcct
     1381 ctttcagctt gtcgagcttc tccttgagcc gcgtcgtctt gagcacgagc acgtcggacg
     1441 gttcctgtct atccgccgta tcgagctggg agagataccg cgccacactc tcctcgagct
     1501 gcgcgcgccg gcgatcgatc ttccctcgtg taaaattgcg atctcgatta ttgaccgctt
     1561 tgaacttgct gccgtcgatc gcgacgctcg ccttcgccaa cagacccatc tggcgacaga
     1621 gattgacgaa attcgcgcac accctgcgga tcgccgggcc attgtccttg cggaaatcgg
     1681 caatcacctt gtcatcggga acgagccgtc cgagtagcca tatgacttcc aagtttcggc
     1741 cggcctcgcg ctcaagccgg cggctcgact gcacccgatt gagatagccg tagatgtaaa
     1801 gcttcagaag aaccgagggg tggtaggcag gccggcctgt cgctgcaggc tcgacgcctt
     1861 cgaagccgag atcggccaga tcgagcgcgt cgacaaagga atc
//
LOCUS       DATILV010000775         2868 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1467611, whole genome shotgun sequence.
ACCESSION   DATILV010000775 DATILV010000000
VERSION     DATILV010000775.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2868
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1467611"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1106
                     /locus_tag="VLJ17_18665"
     CDS             <1..1106
                     /locus_tag="VLJ17_18665"
                     /inference="COORDINATES: protein motif:HMM:NF018516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type VI secretion system ImpA family N-terminal
                     domain-containing protein"
                     /protein_id="HSV25042.1"
                     /translation="QLETLQRLMARTRDLRLLILRARLHILNRNLVGFAQSVAAIAYL
                     LERCWDTVHPRAEGGDLGMRSSAIAALDMPTVIFPLQYAPLLEAHRIGAITYRGLMIA
                     MDEVPPRLGESKLEVGPILEAISSADAVVLAPSRNSVSTLKSSLASIKTAFMAKGHSA
                     GLKNLTELVDKILAFIDPNAVADEGTDADLADTDEGLSATAAGRAPTSLVEASAALAA
                     IADYYSRMEPSSPALPLVRQAHQLIGRSFYEIINILVPSQMEYAAFRIGHDQVFDLPI
                     GKLSELSEVVAVQSTDGSDGQGGEAVGYRVQTRAQAIGLLDLVQRFFRKSEPSSPIPM
                     LCERARALAERDFMSVLRDVLPKSALRNPRDDD"
     gene            1217..1747
                     /gene="tssB"
                     /locus_tag="VLJ17_18670"
     CDS             1217..1747
                     /gene="tssB"
                     /locus_tag="VLJ17_18670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system contractile sheath
                     small subunit"
                     /protein_id="HSV25043.1"
                     /translation="MSKDSGQKFIRRNRPPRVHITYENPANAEEKVEIPFVMGVLADL
                     SGNTPGAEKPDMAQRKFLDFDMDNLDARMAAIQPGVTFRTVNRLSENPDEKMAVNLRF
                     NKMADFEPAAVVKQVPPLAKLLEARSQLANLMRYMDGKVAAEDSLRKLLSDPQLMAAL
                     KDRTAATDGEGEASSS"
     gene            1899..>2868
                     /gene="tssC"
                     /locus_tag="VLJ17_18675"
     CDS             1899..>2868
                     /gene="tssC"
                     /locus_tag="VLJ17_18675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0033104 - type VI protein secretion
                     system complex [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system contractile sheath
                     large subunit"
                     /protein_id="HSV25044.1"
                     /translation="MATQTAPQQEALVQTQDVEEFAALLKQNFKPRTERAATEVENAV
                     KTLVEQALADTSLIKADVLDTIEEMIAQLDKKLSAQLNEIMHAPEFQQIEGAWRGLKH
                     LVFQSETDAMLKIRVMNVGKTELYRHLRQFPNAAWDQSPLFKKVYEEEFGQLGGEPYG
                     CLIGDYSFSHLPTDVQLLRDLSKIAGAAHAPFFAAADSTLMGMDSWNELMNPRDLSKL
                     FDTPEYAAWRSLRDSDDARYVGLCMPRVLARVPYGAKSEPVEEFGFEEETDGHKGEKY
                     TWMNAAYAMAANINRAFKEYGWCARIRGVQSGGEVENLPSHTFPTDE"
BASE COUNT          629 a          792 c          857 g          590 t
ORIGIN      
        1 gtcagcttga gacactgcag cggctgatgg cgcgcacccg cgaccttcgg ctgctcattt
       61 tgcgggcccg tttgcatatc ctgaaccgca atctggttgg ctttgcgcag agcgtcgccg
      121 cgatcgctta tttgctcgaa aggtgctggg atacagttca cccgcgtgcc gaaggcggcg
      181 accttggcat gcggtcatcg gccattgccg cgctcgatat gccgacggtg atcttcccac
      241 ttcagtatgc accattgttg gaagcacacc ggatcggcgc aatcacctat cgcgggctga
      301 tgattgctat ggacgaggtt ccgccccgtc taggcgaatc gaagctggag gtaggtccga
      361 tcttggaggc gatcagcagc gccgatgctg tcgttttggc gccgtcgcgc aacagcgttt
      421 cgacactgaa gtcgtcactc gccagcatca agaccgcctt tatggccaag ggccactccg
      481 ccggcctcaa gaatcttacg gagcttgtgg acaagattct tgcgttcatc gatccgaacg
      541 cagtggcaga tgaggggaca gatgcggact tggccgatac ggatgaaggg ctatcagcaa
      601 cggccgccgg gcgggccccc acttcgctcg tcgaggccag tgccgcgttg gctgcaattg
      661 cagattatta cagccgcatg gagccgtcga gcccagcctt gccgctggtg cgccaagccc
      721 atcagttaat cggcagatcg ttttatgaaa tcattaatat tttagtaccc tcccaaatgg
      781 aatatgcggc gtttcggatc gggcatgatc aggtcttcga tctgccgatc ggaaagcttt
      841 ccgagttatc cgaggttgtg gccgtgcagt cgacggatgg ctcagacggg caggggggcg
      901 aagctgtcgg ttaccgggtg cagacgcgcg cgcaggcgat cgggttgctc gacctggttc
      961 agcgattttt ccgcaagtca gagccgtcca gcccgattcc catgctgtgc gagcgcgcac
     1021 gcgcgctggc ggagcgggat ttcatgagcg tgctacgaga tgtgttgcca aagtcggcac
     1081 tcaggaatcc tcgcgatgac gattgaaagg aggcgccgat cggatggcag tttgacggga
     1141 caaggcaaaa aaaagatgat atccgctcat tccaacacgc aaacccaacc acgaaaccca
     1201 accatgggga tcataaatgt cgaaagatag cggtcaaaaa ttcattcggc gaaatcgccc
     1261 gccgcgggtt catatcacct acgagaaccc cgccaatgcg gaggaaaagg ttgagattcc
     1321 cttcgtcatg ggggtgctgg ccgacctatc tggcaacacg ccaggggctg agaagccaga
     1381 catggcacag cgcaaatttc tcgattttga catggacaat cttgatgccc gcatggcggc
     1441 aattcagccc ggcgtgactt ttcgtaccgt caataggttg tccgagaatc ccgacgagaa
     1501 gatggccgtc aatttgcggt tcaacaaaat ggctgacttc gagccggcgg ccgtagtgaa
     1561 gcaggtaccg ccgttggcga agttgcttga ggcgcgatcg caactcgcca atctgatgcg
     1621 gtatatggat ggcaaagtcg cagcggagga ttcgctgcgc aaattgctgt ccgatccaca
     1681 gctcatggcg gccttgaaag atcgcaccgc ggcgaccgac ggcgaaggtg aggccagttc
     1741 ctcgtagatc gattccgcga aaccagcgta gggcgggttc gctttggagc agtttccagt
     1801 atggttgaat cagctctcca ccgttatgcc cgcgctcctc gcgggcttct gcgcgtttct
     1861 tatcgcacca gacaaccccc cagatagaga gattagctat ggcgactcaa acggcccccc
     1921 agcaggaagc gctcgtccaa acccaagacg ttgaagaatt cgctgcgctt ctcaaacaaa
     1981 atttcaagcc acggacggaa cgtgctgcga ctgaagtaga gaacgcggtc aagacgctgg
     2041 tcgagcaggc actcgccgac accagcctca tcaaggcgga cgtcctcgat acgattgagg
     2101 aaatgatcgc gcagttggac aagaagcttt cggcgcagct gaatgagatc atgcatgcgc
     2161 cggagtttca gcagattgag ggcgcttggc gtggtcttaa acatctggtc tttcaatccg
     2221 agaccgacgc aatgctcaag atccgcgtga tgaatgtcgg caagaccgag ctctaccggc
     2281 atcttcggca attccccaat gccgcgtggg accagagtcc gctcttcaaa aaggtttacg
     2341 aagaggagtt cgggcaactc ggcggggagc cttacggctg tctgatcggc gactactcgt
     2401 tcagtcatct gccgaccgac gttcaactct tgcgcgacct cagcaagatt gccggtgccg
     2461 cccatgcgcc gttcttcgcc gccgcagact cgactctgat ggggatggat tcatggaacg
     2521 agctgatgaa tccgcgtgac ctcagcaagt tattcgatac gccggaatat gcggcgtgga
     2581 ggtcgctgcg cgattccgac gatgcacgct atgtcggctt gtgtatgcca cgcgtcctcg
     2641 ccagggtgcc ttatggggca aaatcggagc cggtcgagga attcgggttt gaggaagaga
     2701 ccgacggtca caagggcgaa aaatatacct ggatgaatgc ggcctatgcg atggccgcca
     2761 atatcaatcg ggcgttcaag gaatatggtt ggtgcgcccg aattcgcggg gtccaatccg
     2821 gaggcgaagt ggagaatttg ccgtctcata cctttccgac cgacgaag
//
LOCUS       DATILV010000776         1690 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4530285, whole genome shotgun sequence.
ACCESSION   DATILV010000776 DATILV010000000
VERSION     DATILV010000776.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1690)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1690)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1690
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4530285"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            199..1662
                     /locus_tag="VLJ17_18680"
     CDS             199..1662
                     /locus_tag="VLJ17_18680"
                     /inference="COORDINATES: protein motif:HMM:NF024821.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV25045.1"
                     /translation="MLALLVVAYFTTRTRLRSATGSKIKSLAVLPLKNLSGDPAQEYF
                     ADGMTEEIIGRLSMIHGLRVISRTSAMHFKDTRAPLPEIAKALGVDAIVEGSVIREGG
                     RVRVHAQLIRAATDEHFWSENYDRELGDALALESEVAQAIAGRVEVTVTGAERAKLVA
                     ARQVSPDVYENFLKGQSVEKSNSPTAKQKGIAYFEEAIKRDPAFAPAYLGLAQAYNAL
                     GTPGVAGAPPNELQPKVISAVRRALELDPALPGAHNLMGSLYQMQWQWNDAEREYKLA
                     LELDPNDAGAHLSFSSWLLSQGRTEEALAWSRRARELDPIGITGNTMGWILFQSRHYD
                     EAIRELRSDLAVRHDDASTYWSCWFLGFALIANGQPDEAIPVLEKALALSERNPAVIG
                     VLVRAYAHAGRRAEALRLLDELKRRQQKGYVPTAAFVNAYLGLGDNEQAFAWLERAYK
                     EHSPILGYIKVHPFFDPLRGDPRFADLVRRVGLDQAQ"
BASE COUNT          346 a          492 c          509 g          343 t
ORIGIN      
        1 gagcggcgcg agggactgcc agtctatcgc atcctccaca gcaagctcgg gtccgtttat
       61 gcatacacga cggaactcga tgcatggcgg gatggcaggg ctggggtagc aacccgtgtc
      121 gcaggcgcag atccagtcct ggagatcgct cggaatggtc ttcgggcgca tcgctggctt
      181 gttgtctgtg gggtcgcgat gcttgcactg ctggtcgtcg cttacttcac gacacgaacc
      241 cgcttaagaa gtgcgaccgg gtctaagatc aagtccttgg cggtattgcc tctgaaaaac
      301 ctttcgggcg atccggccca ggaatatttt gccgacggca tgaccgagga gatcatcgga
      361 cgcctatcca tgatccatgg tcttcgcgtc atctctcgca cctcggcgat gcatttcaag
      421 gatacccgcg cgcctttgcc ggaaatcgcc aaggctctcg gcgtcgatgc catagtggaa
      481 ggctctgtca tacgcgaggg cggtcgggtc cgcgttcacg cccagctcat ccgcgccgcg
      541 accgacgaac acttctggtc cgagaactac gaccgtgaac tcggggatgc tctcgctctg
      601 gagagcgagg tggcacaagc cattgctgga agagtagagg ttacggtcac tggtgcagaa
      661 cgcgccaagc ttgtggccgc gcgccaagtc tccccggacg tttatgagaa ctttctcaag
      721 ggccagtccg tcgaaaaaag caacagccca actgcaaaac aaaaaggcat tgcttacttt
      781 gaagaggcga tcaagaggga cccggcgttt gcaccggctt acctcggctt ggcgcaggct
      841 tataacgcgc ttggcacgcc tggcgttgcc ggggctcctc cgaatgagct gcagccaaaa
      901 gtaatcagcg cggtccgtag ggcgctggaa ctggatccag cgcttcctgg agctcataac
      961 ctgatgggga gtctgtatca gatgcaatgg cagtggaacg acgccgagcg cgaatacaag
     1021 ctcgccctcg agttggatcc gaacgacgcc ggggcgcatc tctcattttc gagctggctg
     1081 ctgtctcaag ggcgcacgga agaggctctc gcatggtccc gacgggcccg ggagcttgac
     1141 cccatcggaa ttacgggcaa taccatggga tggattctat tccagtcgcg ccactacgat
     1201 gaagccattc gcgaactgcg aagcgatctg gcggtgcgcc acgatgatgc ctcgacctac
     1261 tggtcttgct ggttcctggg tttcgcgctc attgcaaacg gtcagccgga cgaagcgatt
     1321 cccgtgctgg aaaaagcgct cgctctcagc gagcgtaatc cggctgtaat cggcgtgctc
     1381 gtcagggcat acgcgcatgc cgggcgtcgg gccgaagcgc tccgcctcct tgatgaatta
     1441 aaacgacggc agcagaaagg gtacgttccc accgcagctt ttgtgaacgc ttatctgggg
     1501 ctcggcgaca acgagcaggc atttgcctgg ctcgagcgcg cctacaagga acactcaccg
     1561 attctggggt acatcaaagt gcatcccttc tttgatcccc tccgcggtga cccgcgtttc
     1621 gcggacttgg tgcgccgcgt cggacttgac caggctcagt agagaagcac tgaaatatat
     1681 tccaatcatg
//
LOCUS       DATILV010000777         7199 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2490501, whole genome shotgun sequence.
ACCESSION   DATILV010000777 DATILV010000000
VERSION     DATILV010000777.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7199
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2490501"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..516
                     /locus_tag="VLJ17_18685"
     CDS             <1..516
                     /locus_tag="VLJ17_18685"
                     /inference="COORDINATES: protein motif:HMM:NF019428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TadE family protein"
                     /protein_id="HSV25046.1"
                     /translation="AGGVMQRSSGLMHCLKAQLRRSLRQLVSGEDGVGGASMIEFAII
                     APMLIAATVCAVDLGMVSYRKLQVQDAAQTGAQYAALHGFNANNISSAITNATAYAGI
                     SASPAPTQFCGCASTSGISTIACGSQCPGAIAAGTYVTTSAQATYTTILPYPIIQNSY
                     ALSAQSTVRIQ"
     gene            513..896
                     /locus_tag="VLJ17_18690"
     CDS             513..896
                     /locus_tag="VLJ17_18690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TadE/TadG family type IV pilus assembly protein"
                     /protein_id="HSV25047.1"
                     /translation="MSIARMLGNVRGTAAIEFAMVAPLFFMLLCGIIEGGLLTWTQVG
                     LQHGAQAAARCASVNLAICGTSASIQSYAAHQAFGLHIDPTTFTFSAAAACGNQVTAN
                     YTFNFFAGYFGMPSLTLTAQSCYPK"
     gene            complement(1085..2629)
                     /locus_tag="VLJ17_18695"
     CDS             complement(1085..2629)
                     /locus_tag="VLJ17_18695"
                     /inference="COORDINATES: protein motif:HMM:TIGR02594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02594 family protein"
                     /protein_id="HSV25048.1"
                     /translation="MSRAIDIVRKIAPQGKADYIAAFEHGDGLLRQHEINTPNRLAHF
                     LAQIMHECGALSIDWEDMDYSAARLVEIFGVGKHSAAVTVEEANQLAHKPTAIAERVY
                     GLGNPEKAEELGNIDPGDGYRYRGGGLLQTTGRGSYCEIGETCSVDFENHPELLLSAE
                     HALKPALAEWTSGNLNVFADNNDFLAISKAINLGNPRAKGTPNGLSSRAEWLARIKPL
                     INRVEFKIDGADSASDGAGEKPTPVAIPQPAGAGPGGLRAQLNGQLLKQGDEGDLVRA
                     MQQALAKLGYPLKGTGHFGGATDAAVTDFQERHHLEVDGIVGPQTAGAIDQAIGGAPP
                     ESTAPVSPGRPLWVVEGMKWIGTEEAAGAADNPAILEWAQEEGGEIAKDYKHDSIPWC
                     SLYANMILKKVGLKGTETLWALDWNEWGVKLQGPGVGAFAPMKRITSDGEIAGHIVVI
                     VGRDKSGNLLGLGGNQDDAVNIRGVPAARPLSFRWPNGVDLPKQVGFEELPLLNASGQ
                     VATEEG"
     gene            complement(2882..3130)
                     /locus_tag="VLJ17_18700"
     CDS             complement(2882..3130)
                     /locus_tag="VLJ17_18700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25049.1"
                     /translation="MSDCIHCEIHDLLESHLEAEEANLAEIASKVTEVLADLILMAPP
                     AERGMLIADVLANLGQFVLEKNEEAMDSGQSGPRRLGH"
     gene            complement(3221..4012)
                     /locus_tag="VLJ17_18705"
     CDS             complement(3221..4012)
                     /locus_tag="VLJ17_18705"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HSV25050.1"
                     /translation="MGACWRVAAAFVLGLLLGLLGPGVLGSSPQGGVAAAELIVLTNQ
                     GATPGVRELAVAFERASGHKVTVIQEDAAALEQRLNSNGPADLITSNPAPIDVLIQKG
                     KVVAGTATPFALAGLGLSVRAGAPKPDIGTVEAYKAALLAAKSIGYSRGCSGTHVAEG
                     IEKLGLTEQLKPKTVFTGGGPVVEYLARGDFEIGIQQTNIMVGAPGTDYVGALPGLLN
                     NPCPSSVALMAVSKEQEAARAMIQFMTSPEAAPLLRKTHVEPAKL"
     gene            complement(4223..4762)
                     /locus_tag="VLJ17_18710"
     CDS             complement(4223..4762)
                     /locus_tag="VLJ17_18710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25051.1"
                     /translation="MKIGEAEFEADVPENKVQPMYAQFLLMVERRNQSVARPTAMRAE
                     AHRQEAEIEGTVCAGASAEPIPVETFDQALLARIFDLREDGAVTLKMLPNGPDKNADA
                     ILLLLYGYHRLKNEECVLATELFRAAEWSGISLRRPAKEFVRNGRFVRRGGQRKGSRY
                     SLNSQGFTMAREIAARMFE"
     gene            complement(5196..5438)
                     /locus_tag="VLJ17_18715"
     CDS             complement(5196..5438)
                     /locus_tag="VLJ17_18715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25052.1"
                     /translation="MRKLTIAAATIAFGALLTLGPALAEVLHGGPVKNGSQCFNYGAG
                     TSRDGRFGTWGACPQTASTAVAPATKKKTSNGSASR"
     gene            5666..6217
                     /locus_tag="VLJ17_18720"
     CDS             5666..6217
                     /locus_tag="VLJ17_18720"
                     /inference="COORDINATES: protein motif:HMM:NF012415.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HSV25053.1"
                     /translation="MKLICFLFGLLIAVSSSRADDITAMISQYRRAHGLSEVKTDAKL
                     TAVAMRQAQAMARAGVLDHDVAGSFASRIAGTNTDSAAENIAAGTKTWADTLRMWQAS
                     PGHNANLLRAGADSLGVAVAQNDNTRYKAYWAMVIGHREVKRRAVLTASYNSGTRPKE
                     RSTEASVSNAVTRAITSLRNLLP"
     gene            complement(6189..6626)
                     /locus_tag="VLJ17_18725"
     CDS             complement(6189..6626)
                     /locus_tag="VLJ17_18725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0050898 - nitrile metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrile hydratase accessory protein"
                     /protein_id="HSV25054.1"
                     /translation="MSQRGNGGPVNIPISESTIDPAVAPKVARSVPGLPCDAEGPVFR
                     EPWEAQAFALVVALHERGLFGWDEWATMLGEEIKAAQRAGDPDTGETYYRHWLAALER
                     MVAHKGITDGAALACYRDAWGRATERTPHGAPIDLTAADFAAK"
     gene            6756..7181
                     /locus_tag="VLJ17_18730"
     CDS             6756..7181
                     /locus_tag="VLJ17_18730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE thiosulfate transporter family
                     protein"
                     /protein_id="HSV25055.1"
                     /translation="MANFSPFSAAIGGALIGLSAVLLMLLTGRVAGISGILAGCLGFE
                     MGDKSWRIAFMAGLVLAPLISGAFGHTVPMPEMPANWLIIVAAGLLVGFGTRLGSGCT
                     SGHGICGIARLSARSITATAIFMAAAIAIVALTRHVFGG"
BASE COUNT         1382 a         2262 c         2038 g         1517 t
ORIGIN      
        1 gctggtggag tgatgcaaag gagcagcggc cttatgcatt gtctgaaggc gcagttgcgg
       61 cgatcacttc gccaactcgt gagcggtgaa gatggcgttg gcggcgcatc gatgatcgaa
      121 ttcgcgatca ttgcgccgat gctcatcgcg gcgaccgttt gcgccgtaga ccttggcatg
      181 gtgtcctacc gcaagttaca agtgcaagac gccgctcaga caggcgctca gtatgcggcg
      241 ctgcatgggt tcaacgccaa caacatatcg agtgccatca ccaacgccac cgcctatgcc
      301 gggatcagcg cgtcgccggc gcccacccag ttctgcgggt gtgcatcgac atcggggatc
      361 agcactattg cctgcggttc tcaatgtccg ggtgccattg cggcgggaac ttatgttacg
      421 acatcagccc aggccaccta caccacgatc cttccttatc cgatcatcca gaacagctat
      481 gcgctgagcg cgcaatcaac tgtgcggatc caatgagcat cgctcgcatg ctgggcaacg
      541 tgcgggggac cgccgccatc gaattcgcca tggtggcgcc gttgttcttc atgctcctgt
      601 gcggaatcat cgagggtggg ctgctcacgt ggacccaggt tggcttgcag catggggctc
      661 aagccgcggc ccggtgcgcc agcgttaatc tggcaatatg cggaacgagc gcaagcattc
      721 aaagctatgc ggcgcaccag gcgttcggat tgcacatcga tcccacgacg ttcaccttca
      781 gcgctgccgc tgcctgcggc aatcaggtca ctgcgaatta caccttcaat tttttcgcag
      841 gttacttcgg catgccgtcg cttacgctca cggcgcaatc ctgttatccg aaataagcaa
      901 gagcgccttc tggatgctgc tgctctatca ccgctgccat tgggaaggtt tgatcgcgcg
      961 tgcacgatcc gggtgagagg gaacgcgcct cacaataggc agctgccgcc ccttcagctg
     1021 gaatgcgcac gcgaagcgcg cccatttcga cccccgcggc ggcgagctct aaccgggaga
     1081 tgcgctaccc ttcttccgtg gcaacctgtc cgctggcatt caacaacggc aattcctcaa
     1141 atccgacctg cttcggcaaa tcgacgccgt ttggccatcg gaagctcagc ggccgcgccg
     1201 ccggcacacc acggatgttc actgcgtcgt cctgattgcc gcccaggccc agcaaattgc
     1261 cggacttatc gcggccgaca atgacgacga tgtggcccgc gatttcgcca tccgatgtta
     1321 tgcgtttcat gggagcaaac gccccgactc ccggaccctg gagtttcacg ccccattcgt
     1381 tccaatcgag cgcccaaagc gtttcggtgc ctttgaggcc cactttcttc aggatcatgt
     1441 tggcgtagag cgaacaccac ggaattgaat cgtgtttgta gtctttggcg atttcaccgc
     1501 cttcctcctg agcccattcg agaatagccg ggttatcggc ggcgcccgct gcttcttctg
     1561 tgccgatcca tttcatacct tccacaaccc acaggggccg accgggcgac acaggcgcag
     1621 tgctttcagg gggggccccg ccgatcgcct gatcaatcgc ccccgctgtt tggggcccga
     1681 caatcccgtc cacctcaaga tgatgtcgtt cttgaaaatc tgtcaccgcc gcatccgtcg
     1741 caccgccaaa gtgtccggtg cccttcaaag ggtaaccgag cttggcgagc gcctgctgca
     1801 tcgcgcgcac aaggtcgccc tcatcgcctt gtttcaataa ctgaccgttt agctgagccc
     1861 ttaacccgcc cggaccagca ccggcgggct gtggaattgc aaccggcgtt ggcttctcac
     1921 ccgccccatc ggaagccgaa tccgcgccgt cgatcttgaa ttccacacga ttgatgaggg
     1981 gtttgatgcg agccagccac tccgcgcggc tcgacaggcc gttgggcgtt cccttcgctc
     2041 tgggattccc gagattgatg gcttttgaaa tggccaagaa atcattgtta tcggcgaaca
     2101 cattcaggtt tccgctggtc cattctgcga gcgccggctt caacgcatgt tcggcggaca
     2161 gcagcaactc gggatgattc tcgaagtcga cgctgcaggt ttctccgatc tcgcagtagc
     2221 tcccgcgtcc agttgtttgc aggagaccgc caccgcggta gcgatacccg tcacccggat
     2281 cgatattgcc gagttcctcg gccttctcgg gattaccgag accatagacg cgttcggcaa
     2341 ttgcggtcgg cttgtgcgcc agttgattgg cctcttccac cgtgacggcg gccgaatgct
     2401 tgcccactcc gaagatttcc acgagccggg cagcgctgta atccatatcc tcccaatcga
     2461 tgctgagcgc gccgcattcg tgcattatct gcgccaaaaa atgcgcaagg cgattcgggg
     2521 tgttgatctc gtgctgccgc agcagcccgt cgccgtgctc gaaagccgcg atataatctg
     2581 ctttgccctg aggcgcgatc ttgcgcacaa tatcaatagc acgtgacatg atttctccta
     2641 gttatgaaca atcgcccctg cctgagaggc aataatttgt tgatgcaaag cttcacacag
     2701 aatctatctc ttggatgtgc ggcaactcac acttagagcg gtttcgttct gatcgaatca
     2761 cacagtcgtg tcatcgtccc ggaatgacac cgagaactgc caagcgcaat actggttctt
     2821 atttcaccga aactcgcgca cgggggatgc ggctatttaa ggttttcgtt cggactatgg
     2881 atcaatgccc caaccggcgc ggaccggact gtcctgaatc catcgcctct tcattttttt
     2941 ccaatacgaa ttgacccaga tttgccaaca catcggcaat cagcatgcct cgttcggcgg
     3001 gcggggccat caagatcagg tcggcgagta cctctgtcac cttcgacgcg atctccgcaa
     3061 gattcgcctc ctctgcttcc aggtggctct ccaggaggtc gtgaatctca cagtgaatac
     3121 agtcggacat ttcagctcct tcggcccgaa ccggccatat cggacatcca cccgggtcgc
     3181 ttcatagtca agcgtgacta aagcgcccgt tcagccggcc tcaaagcttg gctggctcca
     3241 cgtgggtctt gcggagcagg ggggcggcct ccggcgaggt catgaattgg atcatcgcac
     3301 gcgcagcttc ctgctccttg gagaccgcca tcagggcgac acttgacgga caagggttgt
     3361 tgaggaggcc gggcagcgcc ccgacataat cggtccccgg agctcccacc atgatgttgg
     3421 tctgctgaat gccgatttcg aaatcgcctc tcgccagata ttcaacgacc gggccgcctc
     3481 ccgtgaacac cgttttcggc ttcaactgct cggtgagacc gagtttctca attccctccg
     3541 ccacatgcgt gccgctgcag ccgcgtgaat aaccgatcga cttcgccgcc agcaacgccg
     3601 ccttgtaagc ctccaccgtg ccgatgtccg gctttggtgc gcccgcccgc accgaaaggc
     3661 cgaggccggc aagcgcaaac ggcgtcgcgg tgccggccac gaccttgccc ttttggatca
     3721 acacatcgat cggcgctgga ttgctggtga tcaggtcggc cggcccattg gaattgagcc
     3781 gctgctccag cgcggcagcg tcctcttgga tgaccgtcac cttatgaccg cttgcgcgct
     3841 cgaatgcgac ggcgagttcg cgcacgcccg gtgtcgcgcc ctggttagtc aggacgatga
     3901 gttcggccgc cgcaacgcct ccttgaggcg acgatcccaa gactcccgga cccaagagtc
     3961 ccaacaagag tcccaaaacg aatgctgcgg cgaccctcca gcacgctccc atggcgccct
     4021 ccgtttcttt tcggacagcc ggacgagcaa gcttatgccg tcttgcggcc gtggaccagc
     4081 ggcacgaagg tgttcagcct cgcgccatcc accaattcgt tgagtaaatc gaattgaagc
     4141 gatcagctcc cggctcggaa cgggggagga ggggagttcg gcggccggat gcgctgcagg
     4201 caatcgacgg gaattcttga tgctactcaa acattctcgc cgcgatttcc cttgccatcg
     4261 tgaacccctg gctatttagc gaataacggc tgccttttcg ttggccaccc cgacgcacga
     4321 aacggccgtt tctcacgaac tctttggcgg ggcgtcggag cgagatgccg gaccattcgg
     4381 cggcccgaaa aagctcagta gccagaacgc attcttcgtt tttgagccga tgatatccat
     4441 acaggaggag taatatggca tctgcattct tgtcggggcc atttgggagc atcttcaacg
     4501 taacggcccc gtcctcccga agatcaaaaa tgcgtgcgag caaagcctga tcaaatgttt
     4561 cgacgggaat aggttcggca gacgccccgg cgcaaacagt cccttcaatt tcggcctcct
     4621 gcctgtgtgc ctcggcacgc atggcagttg gccgagcgac ggattggtta cgccgttcaa
     4681 ccattaagag gaattgggcg tacatcggct ggaccttgtt ctcaggcaca tcggcctcga
     4741 actcggcttc gccgattttc atcttcaatc gccggaattc ggtcatcgaa tccccacggc
     4801 ctgagggccc gcaagagatt tcacgccgag tgcggcgcgc ggccccacgc actcgttcga
     4861 attgtgacca gtcgaaagaa ccgaagaccc gcgctaaacc tggtttgccg gaacagaaaa
     4921 gccgggcctt gttggagaca atggccccgc gcgctaacgc ggggccaagg agacatcttg
     4981 catgcctgca gagtttttcc cgcctctttg gcggcgattt gcatgtgtac tgttagcgtg
     5041 tgccgtaggc tgagggagca ccgacggcgc acctcttttt cttgtctcgg aacgaggccc
     5101 cgatcgcgga acctgctccg tgcgttttct atgaacgcgt cagctaggac acatcattcg
     5161 ctttaaaccg aaatgattta tgcctccact gcgtgtcagc gagacgcgga accattagag
     5221 gtttttttct tcgtggccgg cgcaacagcc gtgctcgcag tctgcggaca ggcgccccag
     5281 gtgccaaacc gaccgtctct tgatgtaccc gccccatagt tgaagcactg gctgccgttc
     5341 ttcaccggac cgccgtggag aacttcagct agcgccggcc ccaaagttaa cagggcgccg
     5401 aaggcgattg ttgcggccgc aattgtcaat ttgcgcatgg tagttccctc acccttggtt
     5461 gtatatgcat ccaccgcggt tgcataaact taagataaat attctatccc attacaatgt
     5521 tcttagcaat atgaatttta ctcttattaa ttttcgataa acgctgattt gcagccaaaa
     5581 gctgtccaac atcagatctc agccgaacga ttgcgatcgc gccccgatag cgctaattcc
     5641 tccccctaat ggaggggtgg cacacgtgaa actcatctgt ttcctgtttg gattgctgat
     5701 tgctgtttcc agctcccgcg ccgacgacat cacggccatg atctcgcagt accggcgcgc
     5761 gcatgggttg tcggaggtga agacggatgc caaattgacc gccgtggcga tgcggcaggc
     5821 gcaagcgatg gcgcgcgccg gcgtcctcga tcatgacgta gccggctcgt tcgcaagccg
     5881 gattgctggc acgaacacgg attccgccgc ggaaaacatc gcggccggga ccaagacctg
     5941 ggccgataca ctacggatgt ggcaggcctc tccgggccac aacgcaaacc tgttgcgggc
     6001 tggtgccgac agtctcggtg ttgccgtcgc ccaaaacgac aacacccggt acaaggccta
     6061 ttgggcaatg gtgatcgggc acagggaagt taagcggcgt gccgtgctga cggccagtta
     6121 taattcggga acgcgcccga aagagcggtc gacggaggcg tccgtcagca acgctgtgac
     6181 acgtgccatc acttcgctgc gaaatctgct gccgtgaggt cgatcggtgc gccgtgcggg
     6241 gtgcgttccg tagcgcggcc ccaggcgtcc cgatagcacg ccagcgccgc gccatccgtg
     6301 atacccttgt gggcgaccat gcgttcgagc gccgccagcc aatgacggta gtaagtctcg
     6361 ccggtgtcgg gatcgccggc gcgctgcgcc gccttgatct cttcgcccaa catcgtggcc
     6421 cactcgtccc agccgaacag cccgcgctca tgcagcgcca ccaccaaggc gaacgcctgc
     6481 gcttcccacg gctcgcgaaa caccggtcct tcagcatcgc acggaaggcc gggcacagat
     6541 cgagctacct ttggcgcgac ggccggatcg atcgtgctct cgctgatggg aatattcacc
     6601 ggcccgccat tcccgcgttg actcatggta gaggatacac cacctgggcg gccgatgcga
     6661 atgaacgccg ccatcgcaat tggcgtcatc cctgcggcgg cgtatagaaa gggcgtgtcg
     6721 agatcttaac gaggcgcgat cgcagaggag gtcagatggc caacttttct ccgttctccg
     6781 cagcgatcgg cggcgccctc atcggcctct cagccgtcct gctaatgctg ttgactggcc
     6841 gggtcgccgg catcagcggc atattggcag gttgccttgg ctttgaaatg ggtgacaaaa
     6901 gctggcgcat cgccttcatg gcggggcttg tcttggcgcc gctgatctcg ggcgccttcg
     6961 ggcatacggt gcctatgccc gagatgccgg caaattggct catcatcgtc gcggccggcc
     7021 tgctggtcgg cttcggcacg cggctcggca gcggctgcac ctccggccac ggcatctgtg
     7081 gcatcgcgcg cctctccgct cgctcaatca cggccactgc gatcttcatg gccgccgcaa
     7141 ttgcgatcgt cgcgctcacg cgccacgtat tcggaggata ggccatgccg gtgatcgcc
//
LOCUS       DATILV010000778         1593 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_185119, whole genome shotgun sequence.
ACCESSION   DATILV010000778 DATILV010000000
VERSION     DATILV010000778.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185119"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(36..1058)
                     /locus_tag="VLJ17_18735"
     CDS             complement(36..1058)
                     /locus_tag="VLJ17_18735"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV25056.1"
                     /translation="MNHSNAIHTVAAGKIGGTPSAQAWFASGERIGYDPKARAIVRAQ
                     DSPLKVFSRTEGDLSHAVSFLPGYPDGSFGWAKVLSHLPNAAEMPKLFVEYVGMGDSD
                     KPQNYAYSTAERTDLVEAIWRDFGVQSTTLVAFDFSSLVVLEHLRRRLERSQRGEPAG
                     GPQIRGVFVFNGGLFPGGHSHPWFTTPILRRLPSRARPRLARSFTLFKMLAGVMWSKG
                     YKVTDAEVRELYNAINLHDGGFYLAQAAGFAADHQAQGERLDFGRLFTAYRTQFPFLV
                     GGSDEDPFEHRQVDLAHERLGKLGLQIERLPGGHLTTHEQPEALAALIAKFERGLSRG
                     FKRVAG"
     gene            complement(1087..>1593)
                     /locus_tag="VLJ17_18740"
     CDS             complement(1087..>1593)
                     /locus_tag="VLJ17_18740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25057.1"
                     /translation="KTDLEWLREQVLIAIRRGDERAAIYQANLTPPGLLKGRPDVYLP
                     YLILREHFIDRLYDQNVGYWQPDLQGMDHLTRADHAELLVDYLGLSERQLVKAVERLV
                     ADGKYELAASLLESTGSRFEGSASVANARRLVYLKLMEKDQNTDPFKFIVYSGQIAEQ
                     VPQLAAIK"
BASE COUNT          315 a          454 c          488 g          336 t
ORIGIN      
        1 accggtcaaa attcgctact gtttcaagtt gaatttcatc ccgcgaccct cttgaaccct
       61 cttgaaagtc ctcgctcgaa cttcgcgatt aatgcagcta aggcttccgg ctgctcatgt
      121 gtggtgaggt gaccgccggg caaacgctcg atctggaggc cgagcttgcc cagccgttca
      181 tgcgcaaggt cgacctgccg gtgttcaaag ggatcctcgt cgctgccgcc aacaaggaac
      241 gggaattgag tccgataagc cgtgaagagg cgcccgaagt cgagccgctc gccttgcgct
      301 tggtgatcgg ccgcgaagcc cgccgcttgt gcgaggtaga acccgccatc gtggaggttt
      361 atggcattgt agagctcgcg cacctcggcg tccgtgacct tatagccttt ggaccacatc
      421 acccctgcca gcatcttgaa cagggtgaag gagcgcgcca gacgcgggcg ggcccggctg
      481 gggagacgac gcaaaatcgg cgtggtgaac catgggtggg agtgtccgcc cgggaaaagc
      541 ccgccattga agacaaagac tccgcgtatt tgcgggccac ccgcgggttc gccccgctgg
      601 gagcgctcaa gccggcgccg aaggtgctcc aagacaacga gcgaggaaaa gtcgaaggcg
      661 accagcgtcg tcgattggac gccgaaatcg cgccagatcg cttcgacgag atcggtgcgt
      721 tcggcggtgg aatacgcata gttttggggc ttgtcgctgt cgcccatgcc gacatactcg
      781 acgaagagct tcggcatctc ggcagcgttc ggtagatgcg acagaacctt ggcccatcca
      841 aatgagccat ccggatatcc gggcaggaag gacacggcgt gagagagatc accctccgtt
      901 cttgagaaca ccttgagggg cgagtcttgc gctcgaacga tggcgcgcgc tttggggtca
      961 tagccgatgc gctcgccact ggcgaaccaa gcttgggcag acggcgtccc cccgattttt
     1021 ccggcggcca cggtgtgtat tgcgttggaa tggttcattt tttattctcc ttttgcattc
     1081 gcgcgctcat ttgatagcag ctaactgcgg tacttgttcc gcaatctgtc cggagtaaac
     1141 gatgaatttg aacgggtcgg tattctggtc cttctccatc aacttgagat agacgagcct
     1201 cctggcattg gccacagatg cgctaccttc gaatctgctt ccggtggatt ccagcagcga
     1261 ggcggcgagt tcgtacttgc cgtcggccac caggcgttcc actgccttga caagctgtct
     1321 ttccgacaag ccaaggtagt cgaccaggag ttctgcgtgg tcggcacgag tgagatgatc
     1381 cattccttgg aggtccggtt gccaatagcc gacgttctga tcgtaaaggc ggtcgatgaa
     1441 atgctcccgt aagatcagat aaggcagata cacgtcaggc cggcccttga gcaggcccgg
     1501 aggagtcagg ttggcttggt atatcgcagc gcgctcatcg ccgcggcgga tggctatcag
     1561 gacctgctcg cgcagccatt ccaggtcggt ttt
//
LOCUS       DATILV010000779         1912 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4790879, whole genome shotgun sequence.
ACCESSION   DATILV010000779 DATILV010000000
VERSION     DATILV010000779.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1912)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1912)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1912
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4790879"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1125
                     /locus_tag="VLJ17_18745"
     CDS             <1..1125
                     /locus_tag="VLJ17_18745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV25058.1"
                     /translation="AQAIAGASIPQAAQMAADEINAKGGVDGRKIEIITYDNHSSSAD
                     SVRAFQRAVNEDKVNIVIASYISEVVLALEPWASRLKTPFITPGAASNEISKSVHNDY
                     ERNKYTFHGYLTSAALAQSVCDAAKELLVDQKHMKSAVIMSEDAAWTKPLDVGYEECL
                     PKIGLKVLDHIRFSPDTTDFTPIFNKIEAAKPDVMITGISHVGVQPTVQWKNQQVPIP
                     MFGISSQATNSTFGKDTNEASEGVLYQGVSGPNVPVTEKSVPFTQAFKAKFGNYPSYC
                     GYTAYDEVYYIADAVKRAGSTEADKLVDALEKTDWVGTIGRVQFYGKDDQFTHSLKYG
                     KGLITGLMLQWQNGVQVAVWPPEIAKATLKFPSFIKVTSN"
     gene            1220..>1912
                     /locus_tag="VLJ17_18750"
     CDS             1220..>1912
                     /locus_tag="VLJ17_18750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSV25059.1"
                     /translation="MLALQILIDGFAVSALYALGATGFTLIFGVSGVLNLSHGAIMVL
                     AAVAAWAAASVFHVGTYAGALIGVAVALVAAFATYFAVVQPIQKSTRIPNEEKEIFVL
                     TGTLLWGIMIQELIAYFFTNNAKTVLPIVEGVVDILGVRTPRNEIFTAIVCWLVIAML
                     WLLVNRTRTGKAVLAASMNPRGVTLLGLELRNIYIVVWAIYGILAGIAGVLLGMFLGV
                     SSYSVGPLTASAF"
BASE COUNT          389 a          588 c          559 g          376 t
ORIGIN      
        1 gcccaggcga tcgccggcgc gtcgatcccc caagccgcac agatggccgc cgacgaaatc
       61 aacgccaagg gcggggtcga tggccgcaag atcgagatca tcacctacga caaccattcc
      121 tcttcggcgg attcggttcg cgcgttccag cgcgcggtca atgaggacaa ggtcaacatc
      181 gtcatcgcga gctacatcag cgaagtggtg ctcgcgctcg aaccctgggc ttcgcgtctg
      241 aagacgcctt tcatcacgcc cggcgccgcg tcgaacgaga tcagcaagag cgtccacaat
      301 gattatgaga ggaacaaata cacgttccac ggctacctga cctctgcggc gcttgcgcaa
      361 tcggtctgcg acgccgccaa ggagctattg gtcgaccaga agcacatgaa gtctgcggtt
      421 atcatgagcg aggacgccgc ctggaccaag ccgctcgacg tcggttacga ggagtgcttg
      481 cccaagatcg gcctgaaggt gctcgatcac attcgcttct cgcccgacac caccgacttc
      541 acgccgatct tcaacaagat cgaggccgca aaacccgacg tgatgatcac cggcatctcg
      601 catgtcggcg tgcagccgac ggtgcaatgg aagaaccagc aggtcccgat cccgatgttc
      661 ggcatctcgt cgcaggcgac caactccacc ttcggcaagg acaccaacga ggcttccgaa
      721 ggcgtgctct atcagggtgt ctccggaccg aacgttccgg tgacggaaaa gagcgtgccg
      781 ttcacccagg ccttcaaggc aaaattcggc aactatccct cctattgcgg ctacaccgct
      841 tatgacgaag tctattacat tgccgatgcc gtgaagcgcg cgggctcgac ggaagccgac
      901 aagctggtcg acgcgctgga aaagaccgac tgggtcggca ccatcggccg cgtccagttc
      961 tacggcaagg acgatcagtt cacccattcg ctcaaatacg gcaaaggcct tatcaccggc
     1021 ttgatgctgc agtggcagaa tggcgtgcag gtcgcggtct ggccgccgga aatcgccaag
     1081 gccacgttga agtttccaag cttcatcaag gtcacatcga actgataccg catgatgtgc
     1141 tcccgggaga ttgcccggga gcattttcat gattgcatat ttcatcaaca aggcagcggt
     1201 gctgccgcgg ccgatataaa tgcttgcgct ccagatcctg atcgacggtt tcgctgtcag
     1261 cgcgctgtat gcgctcggag caaccgggtt taccctcata ttcggcgttt ccggcgtgct
     1321 caatctatcg catggcgcca tcatggtgct ggcggcggtg gccgcatggg ccgcagccag
     1381 cgtgtttcac gtcggcacct atgccggcgc gctgatcggg gtggcggtag cgctggtagc
     1441 agcctttgcc acctacttcg cggtggtgca gccgattcag aaatcgacac gaatcccaaa
     1501 cgaggagaag gaaatcttcg ttctcaccgg cacgttgctg tgggggatca tgattcagga
     1561 gttgatcgcg tatttcttca ccaacaacgc caagacggtt ctgccgatcg tcgagggcgt
     1621 ggtcgacatc ctcggcgtca ggacgccgcg aaacgaaatc tttacggcga tcgtctgctg
     1681 gctcgtgatc gcgatgctat ggctgctcgt gaaccgcacc cgtaccggca aggccgtgct
     1741 tgcggcctcg atgaatccgc gcggcgtcac cctgctcggg cttgagcttc gcaacatcta
     1801 tatcgtggtc tgggcgattt acggcatcct tgccggcatc gccggcgtgc tgctcggcat
     1861 gttcctgggc gtaagctcct acagcgtcgg accgctgacc gcgagcgcgt tc
//
LOCUS       DATILV010000780         3732 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3508297, whole genome shotgun sequence.
ACCESSION   DATILV010000780 DATILV010000000
VERSION     DATILV010000780.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3732)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3732)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3732
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3508297"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..249
                     /locus_tag="VLJ17_18755"
     CDS             <1..249
                     /locus_tag="VLJ17_18755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HSV25060.1"
                     /translation="TERIEAGRLLEIAEILKVPVLFLFGDALGRTNDREGENDVLEFL
                     DTAYALRLVQAFRRIENRNIRQCIIELVEQVAIDTAGV"
     gene            complement(271..2421)
                     /locus_tag="VLJ17_18760"
     CDS             complement(271..2421)
                     /locus_tag="VLJ17_18760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV25061.1"
                     /translation="MDHATDTSVLGDFNNASFDYYGTHSRFFRRNGKFLVETDGPDGK
                     PDVFEIRYTFGVDPLQQYLIAFPDGRLQALSIAWDSRPKERGGQRWFHLYPNEEIKHD
                     DVLHWTKLNQNWNFMCAECHSTGVHKNYDAKSGRFITTSAEISVGCEACHGQGSRHVV
                     WAHEKQSWWPFGRTDDPSKGLSVSFDERHDITWPIDVRTGNATRRIAPARLRKEVETC
                     GLCHARRAVISEDWVPGRWLSDTHVVSPLTRGIFQPDGQMLDEVYNYASFKQSRMFAA
                     GVTCSDCHEPHGAELRTPGNGVCLQCHASDKYAAASHHRHAAVSPPPLCASCHMPERT
                     YMVVDRRHDHSFRIPRPDVSAKLGTSNACNDCHNDKTAEWAAAAIENWHGPNRKGLQN
                     YAEAFRAAWAGRSDAAASLGKVAADRGIPALVRASALAELASRVSPSNINLAREGLSD
                     PDPMVRIGALDMLEHVPASQIWPLASPLLSDPSRGVRIKAAALLATMPTTDQPVADRD
                     RFDRAATEFIAAQRLNADRPQARSALGHFYARRRLFSEAEFEYQAALQLSPQFAPAAI
                     NLADLYREIGRDGDGERVLRAAIDTSPQDAGLHHALGLVFARLKRTDEATDELRRAAD
                     LEPNRARYLYVYAVALHSAGRRDEAIAALKDYANKQMEDRDILLAVVTFSRDAGDLTT
                     ALEYGERLARLAADDRDIANFVQSLRDRVDKPKQ"
     gene            complement(2888..3175)
                     /locus_tag="VLJ17_18765"
     CDS             complement(2888..3175)
                     /locus_tag="VLJ17_18765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25062.1"
                     /translation="MRTQLAMMVSTLAVATLLASPAAAWWPPNYSGYGPYYGYYGGFY
                     GPYFGYRPYYGYRPYYGYYGYRNYYGSYGPYTANAPVPRYGRSRDFQDNPR"
BASE COUNT          730 a         1134 c         1132 g          736 t
ORIGIN      
        1 accgagcgca tcgaggctgg tcggttgctg gagatcgcag aaatcctgaa ggtgccggtg
       61 ctgtttcttt tcggcgacgc tcttggtagg accaacgatc gtgaaggcga gaacgacgta
      121 ctcgaatttc tcgataccgc atacgcacta cgtctcgtgc aggcattccg gcggatagag
      181 aatcgcaata ttcggcagtg catcattgaa cttgtcgagc aagtcgccat cgataccgcg
      241 ggtgtttagg cgccgtcctg ttgcagccgg ttattgcttc ggcttgtcca cgcgatctcg
      301 cagggattgg acgaaattgg cgatatcccg atcatccgct gcaagccggg ctagccgctc
      361 tccatattcg agcgcagtgg tgagatctcc ggcatcgcgg ctgaacgtga ccacggcgag
      421 aaggatatcg cgatcctcca tttgcttgtt cgcatagtcc ttgagcgccg cgatggcctc
      481 gtcgcgacgc ccggccgagt gcaacgcgac ggcgtagaca tagagatatc gcgcacgatt
      541 cggctcaaga tcggccgcgc ggcgcagctc gtcggtggcc tcgtcggtgc gctttagtcg
      601 ggcgaacacg agacctagag cgtgatgcag tccagcgtcc tggggggaag tatcgatcgc
      661 cgcacgcaat acgcgctcgc catcgccgtc gcggccgatt tcccgataaa gatccgcaag
      721 attgatcgcc gccggtgcaa actgcggact gagctgcagc gcggcctggt actcgaattc
      781 agcctcagag aagaggcgac gccgcgcata gaaatgtccg agcgcggaac gcgcttgcgg
      841 tcggtcggca ttgaggcgct gggcggcgat gaattcggtg gctgcacggt caaaccgatc
      901 gcgatcggcg accggctggt cggtagtcgg catggtagcg agcaaggcgg cggctttgat
      961 gcgcacgcca cggctgggat ccgacagcag cggcgaggcc aacggccaga tttgcgacgc
     1021 cgggacatgt tccagcatat cgagcgcacc gatgcgcacc atgggatcgg ggtcagacaa
     1081 cccttcccgc gccaggttga tgttcgatgg cgagacgcgc gacgcaagct cggccagcgc
     1141 gctagcgcga accagcgccg ggatgccccg atcagccgca actttgccaa gcgatgcggc
     1201 ggcgtcgctg cggccagccc acgctgcccg gaaagcctcg gcataattct gcaaaccttt
     1261 tcggttcggt ccgtgccagt tttcgatcgc tgcggccgcc cattccgcgg tcttgtcgtt
     1321 gtggcaatca ttgcaggcat tggacgttcc aagcttcgcc gatacatcgg gccggggtat
     1381 ccggaagcta tggtcgtggc ggcggtcaac caccatgtag gtgcgttccg gcatgtggca
     1441 tgacgcgcac aagggcggcg ggcttaccgc cgcatgacgg tgatgactcg cggccgcata
     1501 cttgtcggag gcgtggcatt gcaggcagac gccgttgccg ggcgtgcgga gctcggcgcc
     1561 atgcggttcg tgacaatcgc tgcaggtgac acccgccgcg aacatccggc tctgcttgaa
     1621 cgatgcgtaa ttgtagacct cgtccagcat ctggccgtcg ggctggaaaa tcccgcgcgt
     1681 cagcggtgag accacatgcg tatcggatag ccatcggccc ggaacccaat cctcggagat
     1741 gacggcgcgg cgagcatggc aaagcccgca ggtctcgacc tctttgcgca ggcgcgccgg
     1801 cgcgatccgg cgcgtggcat tgccggtcct cacatcgatc ggccaagtga tatcgtgccg
     1861 ttcgtcgaaa gaaacagaca gtcccttgct aggatcgtcg gttctcccaa acggccacca
     1921 gctttgcttt tcgtgcgccc agacgacgtg acgggagccc tgcccgtggc aggcctcgca
     1981 accgacgctg atctccgcgg aggtagtgat aaaccgaccg ctcttagcat cataattctt
     2041 gtgcacgccg gtcgagtggc actccgcgca catgaaattc caattctggt tgagcttcgt
     2101 ccaatgcaga acgtcgtcgt gcttgatctc ctcgttcgga tagagatgaa accagcgctg
     2161 gcctccgcgt tccttcgggc ggctatccca agcaatggac agggcttgta agcggccgtc
     2221 gggaaacgcg atgagatact gctggagcgg atcgacccca aacgtatatc tgatttcgaa
     2281 cacatccggt ttgccgtccg gcccgtcggt ctcgacaagg aatttcccgt tgcggcggaa
     2341 gaaccgcgag tgcgttccgt aatagtcgaa gctcgcattg ttgaaatcac cgagcaccga
     2401 ggtgtcggtg gcatggtcca tggcgtgccg atgttgcgag ttgccccaaa gttccgcttc
     2461 cgtgcggtgg caaccggcac aggtctcact gcccacgaag gtcgcggcag gactgaggtc
     2521 cgcaacagga ccatgccatg gtggattgcc cgagaattga atgacgatcc ccagacaaag
     2581 cgcgagagcc gcgccgattg cggccgcgac ccaaacaacg gatttcgatg gagcgcgcga
     2641 ggcgccgccc accggcgcat cctgcgcaga tgtgtcatgc gccctatcga aggatgtcgc
     2701 tgatggaccg ctgcttgcgg ctttgcgcga tttctggttc acgtcgcccc atccctggcg
     2761 gtgttattat cggccgagtc cgcaatcggc tgcgcacttg tttacaacac tcgcgcacga
     2821 ccaagcattg accgccgcac ccagatggtc tgctcgggtt gcggcggccg atatatcgat
     2881 ttggcagcta cctcggattg tcttggaagt cgcgactccg gccgtatcgt ggaaccgggg
     2941 cgttcgcggt gtagggtccg taggatccat agtaattgcg atacccgtag tatccatagt
     3001 agggccgata tccatagtag ggccgatatc caaagtaggg tccgtagaac ccaccgtagt
     3061 acccatagta gggcccatat ccactgtaat tcgggggcca ccatgccgcg gcgggagacg
     3121 ccagtaacgt cgcgacagcc agcgtcgaaa ccatcatcgc cagttgcgtt ctcatactca
     3181 acctcatgtc tgtactcctg cgttcatacg gtcaaccggt tcgaccggtt cccgatatga
     3241 tcgaacccga tatcattgaa ccgagttccg atataatcga atcaaattgt cttgggtcat
     3301 gccggcgcag agacaccccg ccgcgtcacg cggcccggga ccccgtcttg ctggcatccg
     3361 cgtctttctt gcggcgcgaa caaggcatgg atggccagga caagccacca caagccacca
     3421 caagcccggc catgactctg tagaaaatcg ctcaacgtaa ccgggaaatt ctccattagc
     3481 ctacctgagt tgcagttttg acccctcgca ctttcacaac gatcccgtgg cgggcgccga
     3541 cccatgcggc gtccgccata aagatcagaa aaaacctgcc acacctactt ggccgttgcg
     3601 tgcatggctg ccgcgatatt ggctttcacg gcatcgaggt tgaagctcgc gcccttctgc
     3661 atcggcggga actcgatcgc tgtctgggcc agctcctcca ctttctgctg gacgaacacg
     3721 aagcgccaga at
//
LOCUS       DATILV010000781        17058 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1982214, whole genome shotgun sequence.
ACCESSION   DATILV010000781 DATILV010000000
VERSION     DATILV010000781.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 17058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17058
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1982214"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..239
                     /locus_tag="VLJ17_18770"
     CDS             <1..239
                     /locus_tag="VLJ17_18770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25063.1"
                     /translation="DFALDIYSGYAVNQDDNCYIVELIDQLFASSHATREYRKGNIFK
                     LSKSKVPFPLPSSDITIDHLLAITPNQIGAHPSP"
     gene            complement(362..1513)
                     /locus_tag="VLJ17_18775"
     CDS             complement(362..1513)
                     /locus_tag="VLJ17_18775"
                     /inference="COORDINATES: protein motif:HMM:NF018485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbfB/YjiJ family MFS transporter"
                     /protein_id="HSV25064.1"
                     /translation="MAVCTIAALALAVAMGIGRFAFTPLLPLMVRDGSLAQSAGAWLA
                     ASNYVGYLAGALTASRLGFSLPTLMRVSLIGTAVSTAAMGAFDGMAAWIALRCIAGVL
                     SAWTLVSASAWALQHLVRAGRVDLSGVVYAGVGLGIVFAGLFCLVVARPGVRASQLWL
                     ELGAVSALSIAVPSYLVGTPLATFPAHGSAPPADRAPGPCTGLVICYGILGFGYILPA
                     TFLPALAREVVDDPQMFGLAWPVFGIAAAISTIVTARRFRRTDRLRVWTISHVLMATG
                     VVLPSVCLGPASIAIAALLVGSTFMVVTMIGMQEARARAPGNPAGLLGLMTAAFAVGQ
                     LAGPVASGIIDLLPVGHRAALNCALQLAAVTLALSAAYLWSQSRSGLSG"
     gene            1627..2496
                     /locus_tag="VLJ17_18780"
     CDS             1627..2496
                     /locus_tag="VLJ17_18780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007560603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HSV25065.1"
                     /translation="MRTIDLESLKIFRTVVDEGGVIRAANKLNRVQSNVTTRIRQLEE
                     QLGTRLFRREGRSIRLSAEGQTLLVYANRLLRLADEAVSEMRAGKPKGTFRLGSLEST
                     AGSRLAPILSRYHTLYPDVVVELATGTAGTLVTRVMNFELDAAFVSEPFTAPGLDARP
                     VFEERLVLVTSRAIRKVSGPVDLGRSTLIAFAQGCSYRKRIEEWLGSANVMPERIMEF
                     ASYQAMIACVAAGTGFAIVPKSVLQALRATKSVIQHALPKRISHNRTYLVWNTDPSPA
                     LTGLLSLFASIRA"
     gene            complement(2699..3205)
                     /locus_tag="VLJ17_18785"
     CDS             complement(2699..3205)
                     /locus_tag="VLJ17_18785"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSV25066.1"
                     /translation="MASAGIGSPPHVCGELFTMLTGISLVHVPYGGGAPALTDLIGGQ
                     VQVYFSSTGSSIEYIKAAKIRPLGVTSAQRSAALPDIPAIAEFVPSYEASAWYGLGCP
                     RNTPNEIVEKLNREVNASLADPTLKARLAEFGAVPLLGSASEFGELLADETEKWSKVD
                     KFAGIKPD"
     gene            complement(3145..3492)
                     /locus_tag="VLJ17_18790"
     CDS             complement(3145..3492)
                     /locus_tag="VLJ17_18790"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSV25067.1"
                     /translation="MGQPFIVENKPGAGSNIASEAVVQSPADGYTLLLVSAANAIDAT
                     LYDRLNFNFIHDIAPISGIGRVSNVMVVNTSFPTKTVPEFIAMPRQIPAKLPWRPLAS
                     GVRRMSAANCSRC"
     gene            complement(3493..3675)
                     /locus_tag="VLJ17_18795"
     CDS             complement(3493..3675)
                     /locus_tag="VLJ17_18795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25068.1"
                     /translation="MKFSRRRFLHLAAGAAALPDMSRTARAQAYPTKPVRIVVGYAAG
                     GVNNILARLLGQRLSG"
     gene            3877..5205
                     /locus_tag="VLJ17_18800"
     CDS             3877..5205
                     /locus_tag="VLJ17_18800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV25069.1"
                     /translation="MTSIAAYDSLSATDHSRELRKAVIAATIGTTIEWYDFFLYGTAA
                     GLVFGKLYFPNSDPTTGTLLAFSTYFVGFAARPIGAAIFGHYGDRIGRKATLIATLML
                     MGIATFLIAFVPTYDSIGIWGGIILTVLRAIQGVGVGGEWGGSVLLSMEWSRSGRHNR
                     GFLASWPQFGVPAGLFLSTIVMLGATAWSGDQFVSWGWRVPFFLSIVLVGIGLWIRLG
                     ILETPVFQKLLNLNKIERAPIVEVIKKQPKEVCLSALLRMGQQSPFYIFTAFVFAYGV
                     GTLHMSRDFILSAVLVASCISLITTPLFGHISDRIGRKKMYLIGTVACGLFAFLYFGM
                     LDTELPWAVFLAIAVSLIPHDMMYGPQAALIAEAFTPRLRYSGSSLGYQFASVIAGGP
                     APLIATALFAAYHTGYAIAIYLALCAVISFVSTAYMPDYTGKDVSSEYDD"
     gene            6163..6792
                     /gene="rfbC"
                     /locus_tag="VLJ17_18805"
     CDS             6163..6792
                     /gene="rfbC"
                     /locus_tag="VLJ17_18805"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015452750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008830 - dTDP-4-dehydrorhamnose
                     3,5-epimerase activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HSV25070.1"
                     /translation="MQTIRKQSSVSSLSAAARDLPQVIVATRFVDQRGWFSETFHEKR
                     LREAGITCHFVQDNRSHSKRAGTLRGLHFQLPPAAQAKLVGVLRGRILDIAVDLRNGS
                     PTYGKYVSAELSAENGCQLYVPVGFAHGFCTLEDDVEVMYKVSDYYAPSLDAGVCWDD
                     VDIGVSWPFVKSNIIVSEKDARLPALRSFISPFAYDGHPLMPLASQQAA"
     gene            6811..7869
                     /gene="rfbB"
                     /locus_tag="VLJ17_18810"
     CDS             6811..7869
                     /gene="rfbB"
                     /locus_tag="VLJ17_18810"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013164926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008460 - dTDP-glucose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HSV25071.1"
                     /translation="MRIIVTGGAGFIGSAVVRHLLGHSKHEVFVVDKLTYAGTLASLD
                     PVRSCPGFRFGQADICDQSAMSRIFTDFAPDAVMHLAAESHVDRSIDGPGDFINTNMV
                     GTYVLLEASLAHWRRRGGQPGDFRFHHISTDEVFGALTDDGRFTEETRYDPRSPYSAS
                     KAASDHLVRAWGHTYGLPVVITNCSNNYGPYQFPEKLIPLCVLKGLAGERMPVYGQGL
                     NVRDWLFVDDHASALTLVLERGRPGETYNIGGDAERRNIDVVCAICDALDKLNCGARA
                     SHRELVTFVPDRPGHDFRYAIDFSKLTSELGWRPQRSFEEGLAATVSWYMANRAWWEP
                     LLARHDAAARRGLARKSA"
     gene            7872..8765
                     /gene="rfbD"
                     /locus_tag="VLJ17_18815"
     CDS             7872..8765
                     /gene="rfbD"
                     /locus_tag="VLJ17_18815"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019903183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008831 - dTDP-4-dehydrorhamnose reductase
                     activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HSV25072.1"
                     /translation="MRFLLIGGAGQVGAELRALPRPQGVEISAPTRAELDLTDARAIT
                     RMVAEERWSAVINAAAYTEVDRAESEEETAFAVNAQAPSQLAAETAKRGIPLIHISTD
                     YVFNGRKGAPYAESDGTDPVNAYGRSKLAGETGVRDANPQHIILRTSWVYSPYRKNFV
                     KTILRLATERDRLAVVADQRGCPTAAHDIAKACLDMAIASGSRPERASYGTYHFAGAG
                     EASWFDFAVAIVAIASGRLGRSPEVAPLKTSEYPTAAARAPDTRLDCTAVARAFGINP
                     RPWRESLETTIDRLITTRNFA"
     gene            8762..9709
                     /gene="rfbA"
                     /locus_tag="VLJ17_18820"
     CDS             8762..9709
                     /gene="rfbA"
                     /locus_tag="VLJ17_18820"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003602110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008879 - glucose-1-phosphate
                     thymidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HSV25073.1"
                     /translation="MKGIILAGGAGTRLYPATLAVNKQLLPVYDKPMVYYPLSVLMLA
                     GIRDILLISTPDHLPFYRSLLGDGSTWGISLSYIVQDKPVGLAHAFILGREFVGNDHV
                     ALVLGDNVFYGHGLSEELARAVDRRNGATVFAYYVSEPSQYGVVKFNNSGKPIEIIEK
                     PSHFVSNWAVTGLYFYDNAVLDIAAGLRPSARGELEITDVNRCYLELGRLNVEKLGRG
                     FAWLDTGSHDTLLEAAEFVRSIQHRQGLLVGCPEEIAFTKGFIDNAHLHSLATKYGKT
                     AYGRYLLRLAEEPPRRVIEAPALAPYDVDAPAQRSVAVG"
     gene            complement(9732..10991)
                     /locus_tag="VLJ17_18825"
     CDS             complement(9732..10991)
                     /locus_tag="VLJ17_18825"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSV25074.1"
                     /translation="MNVLFVHNNFPAQFRHIARALAAKPGVRVAAIGSSTARASSGIE
                     LVKYRLSDADVSATHPFARRFDLECRRAEQVLYALSSFAASNFVPDVIVAHSGWGETL
                     PLRAIFPRSRLLVYCEFYYGSEGRDVGFDPEFPATGADGEVALHLKNAASLLALAECD
                     GAIAPTRWQRSTFPAAFQDKIVVQHEGVDVGLAKPCEDASLSLPSGRILTGTDEVVTF
                     AARNLEPLRGYHSFVRALPRIMAARPNAEVLIIGGYGTSYGAAPPRGETWKSIFWSEV
                     ADGVDTRRVHFLGHLVYQDYLRALQISSVHVYLTYPFVLSWSLIEAMSVGGVVIGSDT
                     PPVREVIENERNGLLVSFFDTTGIADRVIEVLADRDRYGALRANARHTVLDRYDLEGI
                     CLPSMMALIQGGQVEPAQSLTPYAEAV"
     gene            11186..12031
                     /locus_tag="VLJ17_18830"
     CDS             11186..12031
                     /locus_tag="VLJ17_18830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020508699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25075.1"
                     /translation="MARVEQRKVAYIDRGLFLIRYAAAEDEARPPKVTVSVDSKHEND
                     ILLVLHPDHTDGTLTEPGSCLVVMAAQSGNVMVEVTPSRRDGSAAATIKIEPLTQGKA
                     QAAPETAAPTVAGGGIRLLGHVAGIGDVFAGADEWLGGPSAPSRIEGIAIEWPDKPSG
                     LILRYAVKTAKPQVTSGRMVEIGSYAGTRGYALPIVSVLLELLGPGAVNYEICAEAIF
                     LGSPRMRATGQRTVLAGPTGREPLVGFRLSMKELEKPAAAAPKASSRVRVFRSKAQST
                     LPVAS"
     gene            12052..14604
                     /locus_tag="VLJ17_18835"
     CDS             12052..14604
                     /locus_tag="VLJ17_18835"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSV25076.1"
                     /translation="MTSAPAIPHVPHHQALELISARALASGDIVSAFAFADRRCRIPP
                     LAEPHCFVLRADALYRMGEKELALLDIARAIEIAPDEIAPNRRLLAWAEGDKQRDAAL
                     RLIARDRDSDSLRDAISILREGGRRAFASARLVNGTIHGWGAWPQTGSLEIIVADGPN
                     SIAYELEEDPMHPLANVVGCAADFVLPLLASDSALLITVSCDDETLVSISYAGDEAGP
                     PQCGPHDRRPSLDSRHVPEATAACAATVIVPIYADFTATRACVESLLAQRPDLPRSRL
                     MLVNDASPDADIQQYLVSLSSDERVEILINERNLGFVGAVNRALSEVLQGDIVLLNAD
                     TIVPPGFVDRLAAAAHSSPQIGTVTPLSNNGEFTSFPVPNTQNPLPSPAEIIAIDRVA
                     AKVNADRIVDIPNGIGFCLFVKRACLDAVGFLSNSYDRGYLEDVDFCLRARERGFRNV
                     CAPSVYVGHAGSRSFGREKRSLVVRNLAVAERRFPTYRSECAAFVTLDPLRISRQAIE
                     RLMPSCDREPLLLVTSEGAVAEAAYARARQIEASGRRALVLTFRRTSGGVVAKLADAS
                     GAAPQSMVFQLDVADDAAELMAYLRATKPVRMEIAGPTAIPLALLDELMALGLPYDVL
                     IADAGLLGDEGALRRGGRAQQRRSTGADRPFALRELMADAERLLAPCDHAEAFVARWF
                     PDGAAARVQRIYSHAGTAPEPDLRPSGGSRHRLGIIPIESGLHEQQFIRDLAVCLRTT
                     CPDRAMVVTGDTPDGLGLMRIGNTLVTGSIGVGELAAACRAHGVGALLACATRPLFGH
                     PLQSVALSCGLPIAYFDWSGGGHRARHGDLLLDPSAPISELVAALVAWQGIH"
     gene            14654..16957
                     /locus_tag="VLJ17_18840"
     CDS             14654..16957
                     /locus_tag="VLJ17_18840"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSV25077.1"
                     /translation="MHTSFVWSQERILSGFVVDLADQAQRFVVELLIDGLSVKTRRAD
                     EYVFELAQQNIGDGCYGFSFFLRDEFVSEGLVAEARLANIGTLIGSPIIFGAPDQGTN
                     SSPPGEIRWLGGLRFSGWLARNADDQLDVLVDGELVTQTETSGWCNVGTNPDSARAAR
                     AFSIELPERFADGHARQLSVTRHNGAALPGCPVAFVAFADGLARALARIDALESERLR
                     AEEFDRLVPMSLPFSKYEGWRERFPPPAARAAASAAVVIVGGGNMEDTIESLHRQTHE
                     QWVAVSLPESAAGAVSFDPALVTAFLDGDGNACDFVMFGLAGTVLAPTALARIADAFA
                     RFEAACAVYGDVDLTGEGGVVWPLAFSAFDYERLLEQGYCAHFFALRAPTAEQALAAG
                     ASDLYRLFNAVLDNDPSRFEKIVHIPGALAALPQIDPHALQPALRAATRTHLEARGVA
                     ANVGPGEGHVMPAVRISRTIDNGRTTVIIPTRNRRKLLVQCIESIQPALKSRADIIVV
                     DNDSSDPDTLDYLAMIEGDVAQVLRVPGDFNFARLNNMAASVAKGDHLLLLNNDIKAL
                     DTDWLDEMLARLAEPDVGAVGALLLWPSGIVQHGGVVLGPGFAATHAFNDRMSGDAGY
                     GDLLRVSHQCSAVTAACLLTRRADFLFVGGLDELRFPVNFNDVDYCLKLRAVGKRIVF
                     TPHAKLLHIESASRGNDKAADKRARLERELINLRTKWGATLADESYYNPTLSLDPIAF
                     SALAWPPREMAPRTAHRPQPVLAPPGF"
BASE COUNT         3252 a         5303 c         5140 g         3363 t
ORIGIN      
        1 gcgattttgc attagacatt tacagtggtt atgccgtaaa tcaagatgat aactgctaca
       61 tcgtcgagtt gatcgatcag ttatttgcat cctctcatgc gacgcgcgaa tacagaaagg
      121 gaaatatatt taaactctca aaaagcaagg ttccgtttcc tctcccgagt tcggacataa
      181 caatcgatca ccttctggcc ataaccccca atcagatagg agcgcatcca agcccctgat
      241 ccctaccgct gtgccacacc tcggccgcca gatcgtggcc acgcaacgtg acgcggaacg
      301 ggaaccgctc tcggtccaga gcaggcatct cacgtcggtc aggctgggtc cgcggcgttt
      361 ctcaaccgct caacccgctg cgtgattgag accagagata ggctgcgctc aacgccaatg
      421 taaccgcagc gagctgcaaa gcacaattga gggcggcgcg atgtccgacc ggcagcaagt
      481 cgatgatgcc ggaggcgacg gggccagcca gttggccgac agcgaaggcg gcggtcatca
      541 gaccgaggag ccccgcagga ttgcccggtg cccgggcgcg ggcctcctgc atgccgatca
      601 ttgtgacgac catgaaggtg ctgccgacca gcaacgccgc aatcgcgatc gacgccggac
      661 caaggcacac gctgggcagg acgaccccag tggccataag gacatgactg atggtccaga
      721 cgcgaagccg atcagtgcga cggaaacggc gggcagttac gatggtggat atagcagccg
      781 cgatgccgaa cacgggccag gcaagcccga acatctgcgg atcgtccacc acctcgcgcg
      841 cgagagcggg aaggaacgtg gcgggcagga tgtagccgaa accaagaatg ccatagcaga
      901 tcacgagacc cgtgcacggg ccaggcgcac ggtcggcggg tggtgccgaa ccgtgggcgg
      961 ggaaggtcgc caatggcgta cctacaaggt agctgggaac agcgattgaa agcgcggaca
     1021 ctgcccccag ctccagccaa agctggctcg cccgcacacc gggtcgcgcc accacaagac
     1081 agaacagccc ggcaaacact atcccaaggc cgacaccggc atagaccacc ccagagagat
     1141 ccacccgtcc cgcgcgcacc aagtgttgta atgcccatgc gctggcggag accagcgtcc
     1201 aggcgctgag cacgcccgct atgcaacgca gagcaatcca ggctgccatt ccgtcgaacg
     1261 cacccatcgc ggctgtggac acggcggtgc cgataaggct cacgcgcatc agcgtcggca
     1321 gggagaagcc caaccggctt gcggtcaagg caccagccag atagcccacg tagttgctgg
     1381 ccgcgagcca ggctcccgcg ctctgtgcca aggaaccgtc gcgcaccatc agcggcagca
     1441 gcggcgtgaa ggcgaagcgg ccaattccca tcgcaacagc cagcgcaagg gccgcaatcg
     1501 tgcagacagc catgacgggg agctcaggcc gctgtgtatg aacgccgagt tcgggtctca
     1561 tgcatcggaa taaggcccgc ccggtcggct tagacaaatg aataatcgtg taatattgtt
     1621 cttcatatga gaacgatcga tctagagtcc ctgaagatct tcagaaccgt tgtggacgag
     1681 ggcggagtta tccgcgcggc caacaaactc aaccgcgtcc agtccaatgt gaccacgcga
     1741 atccgccagc ttgaggagca actcggcaca cggctgttcc gccgcgaggg gcgctccata
     1801 cgtctctcgg cagagggaca gaccctgctc gtctatgcaa accgtctttt gcgcttggca
     1861 gacgaggcgg tcagcgaaat gcgtgccggc aagccaaagg gcacatttag gctaggctca
     1921 ctcgagagca cggccggcag ccgcctggcg cccatcctgt cgcgctatca caccctctat
     1981 cccgatgtgg tggtcgagct cgcaaccgga acggccggga cgttggtgac gcgtgtgatg
     2041 aatttcgagc ttgacgctgc cttcgtgtcc gagcccttca cggcacctgg ccttgacgcg
     2101 cgccctgtgt tcgaggagcg gctggtgctc gtgacatcca gggcgatacg caaggtctca
     2161 ggaccggtcg acctcggccg ctcaacgctc attgccttcg cgcagggctg ctcctatcgc
     2221 aagcggatcg aggaatggtt gggaagcgcg aatgtgatgc ccgagcggat catggaattt
     2281 gcctcgtatc aggcgatgat cgcttgcgtc gctgccggca ctggatttgc tatcgtgcca
     2341 aaatctgtcc tgcaggccct tcgcgcgacc aagagcgtaa tccaacacgc gctcccgaag
     2401 cgaatctcac acaaccgcac ctatcttgtc tggaataccg atccttcgcc ggcgctcact
     2461 ggcctgctgt cgctcttcgc cagcatcaga gcgtgaccgc agcatcagag cgtgaccgcg
     2521 ttctcccagg tctctcgctt agccgtctga aattggccag gaacgccaac ttgccacacc
     2581 acagcggcac agccgctgtt tggggtcgtg cagacatggc atccgagccg ctgatctggc
     2641 gtgattgacc ctgagcgctc atgcaggcct tgcgagaacc gaacttggaa tcgcgagatt
     2701 agtcgggctt gatgccggca aatttgtcga ctttgctcca tttttcagtt tcatcggcaa
     2761 gcagctcgcc gaattcagag gccgagccga gcaacgggac cgcgccgaat tccgcaagcc
     2821 gcgccttcaa cgttgggtcg gcgaggcttg cgttgacctc acggttgagc ttctcgacga
     2881 tttcgttagg cgtatttctt ggacacccaa ggccgtacca ggcgctcgct tcatagcttg
     2941 gcacgaactc ggcgatcgcc ggaatatcag gcagtgcagc agatcgttga gcgctcgtca
     3001 cgccgagagg ccgaatcttt gcggccttga tgtattcaat ggacgagcca gtcgaggaaa
     3061 aatacacctg cacttgcccg ccgatcagat ccgtgagcgc gggcgcgccg cctccatagg
     3121 gcacgtgcac caagctgata ccggtcagca tcgtgaacag ttcgccgcag acatgcggcg
     3181 gactcccgat gccagcggac gccatggcaa ttttgccggg atttgccttg gcatagcgat
     3241 gaattccgga accgtcttgg tcgggaacga tgtgttcacc accatgacgt tagatacgcg
     3301 accaatgccc gagatcggcg cgatatcgtg gatgaagttg aaattcaatc tatcgtacag
     3361 cgttgcatcg atggcgttgg ccgcgctgac gaggagcaac gtgtagccat ccgccggaga
     3421 ctgcacaacg gcttcgctag cgatattgct gccggctccg ggcttgtttt caacgatgaa
     3481 cggttgtccc agtcaccccg acagccgttg gcccagcagg cgcgcaagaa tgttattcac
     3541 tccaccggcc gcgtacccca ccacgatgcg aacgggcttg gtcggatagg cctgcgccct
     3601 cgcggttcgt gacatatccg gcagcgcggc agcccccgcg gcaaggtgca gaaatcgtct
     3661 gcgcgaaaat ttcatggcct ctctcccacg ttccggcgtg cacatggcga aactacaacg
     3721 tcgttgatat cagccgcgtt ttcgcgccgg tagagcgggt tcctctgttg ggtcatccgc
     3781 ccaaaaaagc ttgcgtaagt aagggcacaa tctatcctct gcctaggaaa taagcgcccg
     3841 caagaatggg acgagatcta atagagggag gcacatatga cttcgattgc cgcttacgac
     3901 tcgctttccg cgaccgacca cagtcgggag ctgcgcaagg cggtgatcgc ggcaacaatc
     3961 ggcactacca ttgaatggta cgacttcttc ctctatggaa ccgccgctgg attggttttc
     4021 ggcaagcttt atttcccgaa ctccgatccg acgaccggta cgctcttggc cttcagcacc
     4081 tactttgtcg gcttcgcggc acggcccatt ggtgccgcga tctttggcca ttacggcgac
     4141 cgcattggcc gcaaggcgac gctgatcgca accctaatgc tcatgggcat tgcgaccttc
     4201 ttgatcgctt tcgtgcccac ttatgactcg attgggatct ggggcggcat catcctgacc
     4261 gtgctgcgtg cgattcaggg cgtcggcgtt ggcggcgaat ggggcggctc ggtgctgttg
     4321 tcgatggaat ggtcgcgcag cggccgccac aaccgcggct tcctcgcgtc ctggccgcaa
     4381 ttcggcgtgc ccgcgggctt gttcctgtcg accatcgtca tgctcggcgc tactgcttgg
     4441 tctggcgacc agttcgtcag ctggggctgg cgggtgccgt tcttcctgag catcgttctg
     4501 gtcgggatag gcctctggat ccggctcggc atcctcgaga cgccggtgtt ccagaagctc
     4561 ctcaacctca acaagattga gcgcgcaccc atcgtcgagg tcatcaagaa gcagccgaag
     4621 gaggtctgcc tctctgcgct gctgcgcatg ggtcagcagt cgccattcta catctttacc
     4681 gcatttgtgt tcgcctatgg cgtcggcact ttgcacatgt cgcgggactt catcctcagc
     4741 gccgtgttgg tcgcctcgtg catttcgttg atcacgactc cgctcttcgg ccacatctcg
     4801 gaccgcatcg gtcggaaaaa gatgtacctc atcggcacgg tagcctgtgg gctattcgcc
     4861 ttcctctatt tcggcatgct ggacaccgag cttccgtggg cggtgttcct tgccatcgcg
     4921 gtgtcgctca tcccccacga tatgatgtat ggcccgcagg cggcgctgat cgccgaagcc
     4981 tttacgccgc ggctcagata tagcggctcg tcgctcggtt atcagttcgc ctcggtgatc
     5041 gccggcggac cggcgccgtt gatcgcgact gcactgttcg cggcctatca caccggctac
     5101 gccatcgcca tctacctcgc gctttgcgct gtgatcagct ttgtctcgac ggcgtatatg
     5161 ccggactata ccggcaagga cgtctccagc gaatacgacg attgagcttc gctgctcgct
     5221 tgaggcgaga ggggctcggg acgcgaccgt cttgctcata ggccccgtct gtcgcattcc
     5281 aggtgcgcca acagcgtccc gcgctttccg tggaaaaaaa cggaggtgcg ggcgccgttg
     5341 aaaataaccg ttcgccgtca aacgggcata ttcgcccgta gggccaaaaa attcatctca
     5401 ggcgccctgc tccgttcacg ctgcctcccg atggtaatag caagagaccg cccagtcgct
     5461 cgcgacattg aacgagcccc gcgcggcgga tgttcgcatc acgagggaac agcaggacat
     5521 tacccttccc cctgatggtt ccgctcagca tggtaatgct cgacatattc gctaagcgcc
     5581 cgccgcaagg agctctcacc caagaggatt accttggaca ggcactcgtg cttgaccgac
     5641 ctgacccacc gctccgcgca ggcattctca aaagcagtca actacgcttg ttccgctcga
     5701 tgtggcgcag accttccagg ttacacatgt cttccatccg cttcgcgggc atggagctcc
     5761 cgctggtaga tcagtacatc gcctggggag aagactgtgt ctatccgcca gttatgctag
     5821 gtcaagtctg caaggggggc cccgattggt ggaacaatct gagaaaaagc ttagcaattc
     5881 tacgggcatg aattgtccca ctttttatct aagtgtctga tttctttgga ccgttcgagt
     5941 cctgttctgg ctatccttcg cctaccgcat cgtttttata aagctgaacg tggcgggcga
     6001 cttgcaattg cacaccaaag cgtgctcgac cttctcgtcc ggtagggatt tactcaaatt
     6061 tcacagcgca atttgcgcct cgcgatagcg caaaattcat tcggtgttgt tacgccatca
     6121 ccgggaagat ggggcggggg ctggaataga atgtcttgcg tcatgcaaac tatccgaaag
     6181 cagtcgtccg ttagcagttt atctgccgcg gcgcgcgatc ttccgcaagt cattgtggca
     6241 acacgcttcg tcgaccagcg cggctggttc agcgaaacct ttcatgaaaa gcggctgcgc
     6301 gaagccggta tcacctgtca tttcgttcaa gacaaccgat cgcactcaaa acgcgccggg
     6361 acattacggg gtcttcactt ccagctgccg cctgccgcac aagccaagct cgtcggtgtg
     6421 ttgcgcgggc gcatcctcga catcgcggtg gacctccgca acggctcgcc aacttacggg
     6481 aaatacgtct cggccgagct gtcagcggag aacggctgtc agctctatgt gccggtcggc
     6541 tttgctcacg gcttctgcac tttggaggac gatgtcgagg tgatgtacaa ggtgtcggat
     6601 tactatgcgc cttcgctcga tgcaggtgtg tgctgggatg acgtggatat cggcgtttcc
     6661 tggccgttcg tgaagtccaa cattattgtg tccgagaagg acgcccgtct gccagctctc
     6721 cggagtttca tcagtccgtt tgcctatgac ggccacccgc tgatgccact cgcgtcgcag
     6781 caggccgcat agaggtagag gagcgacgtc atgagaatca ttgtcaccgg cggggctggc
     6841 tttattggat ccgccgtggt gcgacacctt ttgggccaca gcaagcatga agtattcgtc
     6901 gttgacaaac tgacctatgc ggggaccctc gcctcgctcg atccggtgcg cagctgcccg
     6961 ggctttcgct tcggccaggc ggatatctgc gatcaatccg cgatgtctcg catcttcacc
     7021 gatttcgctc ccgacgccgt gatgcatctt gcggccgaga gccatgtgga tcgctcgatc
     7081 gacggcccgg gcgatttcat caacaccaat atggtcggca cctacgtgct gttggaagca
     7141 tcgctggcgc actggcgtcg gcgcggcggt cagcctggtg acttcaggtt ccatcacatc
     7201 tcgaccgacg aggtgttcgg cgcgctcacc gatgatgggc ggtttaccga agaaacccgc
     7261 tatgatcccc gctctcccta ttcggccagc aaggcggcat cggatcatct tgtacgagca
     7321 tggggtcaca cctacgggct gccggtcgtg atcaccaatt gctcgaacaa ttatggtccc
     7381 taccaattcc ccgaaaagct cattccgctg tgcgttctca aaggtctggc cggtgagcgg
     7441 atgccggtct atggccaggg gctcaacgtt cgtgactggc tgttcgttga tgatcatgcg
     7501 agcgctctaa cgctggtgct ggagcgcggc cggcccgggg agacctacaa catcggcggt
     7561 gacgctgaac gacgcaacat cgatgtcgtc tgcgcaatct gcgacgctct ggacaaactc
     7621 aattgcggcg cgcgagcctc gcaccgcgag ctcgtaacct tcgttccgga tcgtccgggt
     7681 cacgatttcc gctacgcgat cgatttttcc aagctcacga gcgaactcgg gtggcggccg
     7741 cagcgcagct tcgaggaagg gctcgccgct acggtgtcgt ggtacatggc aaaccgcgcg
     7801 tggtgggaac cgttgctggc aagacacgat gccgccgcgc gccgcgggct tgcccgcaag
     7861 agcgcatgac gatgcgcttt cttctgattg gcggcgccgg ccaggtcggc gcagaactca
     7921 gagcattacc acgcccgcag ggcgtggaga tttcggcccc gaccagagcc gagctcgatt
     7981 tgacggacgc gcgcgcgatc acccgtatgg tcgcggagga gcgctggagc gcggtcatca
     8041 atgcggcggc ctacacagag gtcgatcgcg ccgagagcga ggaggaaacg gcctttgcgg
     8101 tcaatgcgca ggcgccctcg caacttgcag ccgaaacggc aaagcgcgga attccgctca
     8161 tccacatttc gaccgactac gtgttcaacg gccgcaaggg cgctccctac gcggagtcgg
     8221 acggaaccga tccggtgaac gcctatggcc gcagcaagct tgcgggcgaa accggcgttc
     8281 gggacgccaa cccgcagcac atcatattgc ggacgtcgtg ggtctacagt ccttaccgca
     8341 agaatttcgt aaagaccatt ctgcgtctcg cgaccgagcg ggatcgacta gcagtggtcg
     8401 ccgatcaacg cggctgtccg acggccgcgc atgacattgc caaggcatgt ctcgatatgg
     8461 cgattgccag tgggtcacga cctgagcgcg cctcgtatgg cacctatcat ttcgcgggtg
     8521 ccggcgaggc aagttggttc gatttcgccg tcgccatcgt ggcaatcgca tcgggccggc
     8581 tcgggcgctc acctgaggtc gctcctctaa agacgagtga atatccaacg gccgccgcgc
     8641 gggcaccgga tacgcgcctc gactgcaccg cggtggcgcg cgccttcggg atcaatccgc
     8701 ggccatggcg ggagagtctt gaaaccacga tcgatcgcct catcaccaca aggaacttcg
     8761 catgaagggc attatccttg ctggaggcgc gggcacgcgc ctctatccgg cgacgttggc
     8821 cgtcaacaag cagctgctgc cggtctatga caagccgatg gtctactacc ctctttccgt
     8881 cctgatgctg gccggaatcc gggatatcct tctgatctcg acgccggatc acctgccgtt
     8941 ctaccgcagc ctgctcggcg acggctcgac ctggggaatt tcgctgagtt acatcgtgca
     9001 ggacaagccg gtcggccttg cccacgcatt catcctcgga cgcgaatttg tcggcaacga
     9061 tcacgtcgcg ctggtcctcg gcgataacgt gttttacggc catggtctga gcgaggagct
     9121 cgcgcgcgcc gtcgatcgtc gcaatggggc gaccgtattc gcctattatg tgagcgagcc
     9181 gagccaatac ggggtcgtca agttcaacaa cagcggaaag cccatcgaga ttatcgaaaa
     9241 acccagccat ttcgtatcga actgggccgt cacgggactc tatttctatg acaatgctgt
     9301 tctcgatatc gccgccggac tgcgcccatc cgcgcgcggc gagctggaga tcaccgatgt
     9361 caaccgctgt tatcttgagc tcggtcggtt gaacgtcgag aaactcggtc gcggcttcgc
     9421 gtggcttgac accggcagtc acgacaccct gctggaggcg gcggagttcg tccgctcgat
     9481 ccaacaccgg caaggccttc tggtcggatg tcccgaggaa atcgcgttca ccaagggctt
     9541 catcgacaac gcgcacctgc atagccttgc cacgaaatat ggcaagaccg cctatgggcg
     9601 ctatctgcta cgattggccg aggaaccgcc gcgtcgcgtc atcgaggcac cggcactggc
     9661 gccatatgac gttgatgccc cggcgcagcg cagcgtcgcg gtcggataaa accgtaatcc
     9721 cgcggtcgcc gtcataccgc ttccgcgtag ggcgtgagtg actgggcggg ctctacctgt
     9781 cctccttgta tcaaagccat cattgagggc aggcagatgc cttcgagatc atagcgatca
     9841 agaaccgtat gccgcgcgtt ggcgcgaagt gccccgtagc gatcacggtc cgcaagcacc
     9901 tcaatgacgc gatcggcaat gcccgttgtg tcgaaaaacg aaaccagcag gccgttccgt
     9961 tcgttctcga tgacttcacg cacgggcggc gtatcggacc caatcacaac gccaccgaca
    10021 ctcattgcct cgatcaggga ccatgagagc acaaaagggt aagtcagata gacatgtacc
    10081 gaggaaatct gcagcgctcg cagatagtcc tggtacacca agtgtccaag aaaatggacg
    10141 cggcgcgtat ccacgccgtc cgcaacctcg ctccagaata tcgacttcca cgtctcgccc
    10201 cgcggcggcg cagccccgta ggacgtgccg taaccaccaa tgatcaggac ttcggcattc
    10261 ggccgcgccg ccatgatccg cggcaatgcc cgcacgaagc tgtgatagcc gcgcagtggc
    10321 tcgagattgc gcgccgcaaa ggtcaccacc tcgtcggtgc cggtgaggat gcgccccgag
    10381 ggaagcgata gcgaagcgtc ctcacaaggc tttgccaagc cgacatccac gccctcgtgc
    10441 tgcaccacga tcttgtcctg gaaagccgcc gggaacgtcg atcgctgcca gcgggtcggc
    10501 gcgattgcgc cgtcgcattc cgcgagcgca agtaggctcg ctgcattctt gagatggagt
    10561 gcgacctcgc catcggcgcc ggtcgcggga aattcggggt cgaagccaac gtcgcggcct
    10621 tcgctgccat agtagaattc gcaataaaca agcagccgcg atctcggaaa gatcgctcgc
    10681 agcggcagcg tttcgcccca acccgaatgg gccacgatga catccggcac gaagttcgac
    10741 gcggcaaacg atgacaaggc ataaagcacc tgctctgccc ggcggcactc aagatcaaag
    10801 cggcgcgcaa acggatgtgt cgctgagaca tcagcgtcgc tgaggcgata tttgacgagt
    10861 tcgatccccg aactggcgcg cgccgtggag gagccgattg cggcgacgcg cacgcctggc
    10921 tttgcggcga gggcccgcgc tatatgccga aattgcgccg ggaagttgtt atgaacaaac
    10981 aacacgttca tgagaggcct atgcctgatc ctgggttggc catggttaag actccatcaa
    11041 gaggtccgct cgacttgcga acgacatttg cgcccttcaa tcgaccgcat tcggcaactt
    11101 gtcgatccgc tattaactcg cggcagaact atttggctta cgactatggg ccgtggagcg
    11161 ttgaaattca gataagaggg cagagatggc gcgtgtcgag caacgcaagg tcgcctacat
    11221 cgatcgaggg ctgttcctga tccgctacgc ggctgccgaa gacgaggcac ggccccccaa
    11281 ggtcacggtc tccgtcgact ccaagcatga aaatgacatt ctgctggtcc tgcatccgga
    11341 tcacaccgat ggcacgttga cggagcccgg atcatgcctc gtggtgatgg ctgcgcagtc
    11401 cggcaacgtc atggttgagg tcacgccgtc gcggcgcgat ggctcggcag ccgccacgat
    11461 caagatcgag ccgctgacgc agggaaaggc gcaagcggca ccagagacgg cggcgcccac
    11521 cgtcgcgggt ggcggtatcc gcctgctcgg ccatgtggcc ggcatcggcg acgtctttgc
    11581 gggggcggac gaatggctcg gcgggccgtc ggcaccatcc cgcatcgagg ggattgcgat
    11641 cgaatggccg gacaagccga gcggtctgat ccttcgatat gccgtcaaga ccgcgaagcc
    11701 ccaggtcaca tcgggtcgaa tggtcgaaat cggatcatat gccggcaccc gcggctacgc
    11761 cttgccgatc gtcagcgtac tgctggaatt attgggcccc ggcgcagtca actacgagat
    11821 ctgcgccgag gccatcttcc tcggatcgcc gcgcatgcgt gccactgggc agcgcacggt
    11881 tctggctggg cccaccggcc gcgagccgtt ggttggattc cgcctcagca tgaaggagct
    11941 tgagaaaccc gcggccgccg cgccgaaagc cagtagccgg gtccgggttt ttcgcagcaa
    12001 ggcgcaatcg acgctgccgg tcgcaagctg aactgcccac gtgttcgcga gatgacaagc
    12061 gcgccggcga tcccccatgt gccgcaccac caggccttgg agctcattag cgcacgcgcg
    12121 ctcgcatccg gtgatatcgt ttcggcgttc gccttcgccg accgcaggtg ccgcattccg
    12181 cccttggcag agccgcattg cttcgttctg agggcggacg cgctctatcg gatgggggag
    12241 aaggaactcg cactcctgga cattgcacgc gcaatcgaga ttgccccgga cgaaatcgct
    12301 ccaaaccggc gcctccttgc gtgggccgaa ggcgacaagc aacgggatgc ggcgctccgg
    12361 ctgatcgcgc gcgaccgcga ttcggattcg ctccgcgacg ccatctcgat cctgcgcgaa
    12421 ggcggaagac gtgcgttcgc gagcgcgaga cttgtcaacg gcaccattca cgggtggggg
    12481 gcctggccgc agaccggctc tctcgagatt atcgtcgccg acgggccgaa ctccattgca
    12541 tacgagcttg aagaagatcc aatgcatccg ctggcgaatg tcgtcgggtg tgctgccgat
    12601 tttgtcctgc cgctgctggc atccgattca gccctgctga taaccgtgtc ttgcgacgac
    12661 gaaacgctgg tgtcaatcag ctatgcgggc gatgaagccg ggcccccaca atgtgggccg
    12721 catgatcgcc gacctagcct cgactcgcgc cacgtgcccg aggcgacggc cgcctgcgcg
    12781 gcaacggtca tcgtcccgat ctatgccgac ttcacggcga caagggcctg cgtagaaagc
    12841 ctgctggcgc agcggccaga tcttccaaga tcgcgcctaa tgttggtgaa tgatgcaagt
    12901 cccgatgcag acatccaaca gtatcttgtg agcctcagca gcgatgagcg ggtcgagata
    12961 ctgatcaacg agagaaatct cggatttgtc ggggccgtca atcgcgccct gagcgaagtt
    13021 ctccagggcg acattgtcct cttgaacgcc gacactatcg tgccgccggg ctttgtcgac
    13081 cgactggcag cggcggcgca cagctcgccc caaatcggaa ccgtgacacc tttgtccaac
    13141 aacggcgaat tcacgagctt cccggtgccc aacacacaaa atccgttgcc gtcgcctgct
    13201 gaaatcatcg ccatcgaccg cgtcgccgca aaggtcaatg ccgatcggat cgtcgatatt
    13261 ccaaatggca tcgggttctg tctctttgtg aagcgcgcat gcctcgatgc ggtcggtttc
    13321 ctctcgaaca gctacgatcg cggttacctt gaggacgtcg atttctgtct gcgcgcgcgc
    13381 gagcgcggtt tccgcaatgt gtgcgcaccc tcagtctatg tcggccacgc cggctcacgc
    13441 tcgtttggga gggagaagag atcgctggtc gtgcgcaatc tcgcggttgc ggagcggcga
    13501 ttcccgacct atcggtcgga atgcgccgcg ttcgtgacac tcgatccatt gcggatctcg
    13561 cggcaggcga tcgagcgctt aatgccctcg tgcgaccgcg agccactgtt gctggtcacc
    13621 agtgaaggtg ccgtcgccga ggcagcgtac gcgcgcgccc ggcaaataga ggcgagcggg
    13681 cggcgagcgc tcgtgctgac ctttcgcaga acgtcgggcg gcgtcgtcgc gaagcttgcg
    13741 gacgcatcgg gcgccgcacc acaatcgatg gtgtttcaac ttgacgtcgc cgatgatgcg
    13801 gcggagctga tggcatatct gcgcgccaca aagcccgtcc gcatggagat tgccggtccg
    13861 accgccattc cgctggcgtt gcttgatgaa ctcatggcac tcggccttcc ctacgacgtc
    13921 ttgattgccg atgccggtct tctgggtgat gaaggcgccc tgcgccgtgg cggcagagcg
    13981 caacagcgcc gctcgaccgg tgctgaccgg cctttcgcct tgcgcgaatt gatggcggat
    14041 gccgaacgct tgctggcgcc gtgtgatcac gcagaggcgt tcgtggcacg ctggttcccc
    14101 gacggcgcgg cggcgcgtgt tcagcggatc tattcgcatg ccggcacggc accagagcct
    14161 gacctgcgcc cctcgggcgg atcgcgtcac cgactcggca tcattccaat cgaatccggg
    14221 ttgcacgaac agcaatttat ccgcgatctc gccgtttgcc ttcgcacgac atgtcccgac
    14281 cgcgccatgg tggtcacggg tgacacgcca gacggcctcg gtctgatgcg gattggcaat
    14341 acgcttgtga ccggatcgat cggcgtgggc gagcttgccg ccgcttgccg ggcgcatggc
    14401 gtgggggccc tccttgcctg tgcgacccgc ccgctgttcg gccatccgct ccagtcggtc
    14461 gcactgtcct gcggcctgcc gatcgcatac ttcgattggt cgggcggcgg ccatcgcgcg
    14521 cgacacggcg accttctgct cgatccaagc gcaccgatta gcgagttggt tgctgcactt
    14581 gttgcgtggc agggaatcca ctgacgtgca gatggcgagc gaccattgcg gcacgcgggc
    14641 gccccaacga agcttgcaca catcattcgt ctggtcgcag gagcgaattc tttcagggtt
    14701 cgttgtggac ctcgcagacc aggcccaaag gttcgttgtc gaactcctga tcgacggact
    14761 ttcggtcaag acgcggcgag ccgacgaata cgtgtttgag ttggcacaac agaacatcgg
    14821 cgatggctgc tacggctttt cgttttttct gcgtgatgaa ttcgtcagcg aaggattagt
    14881 ggccgaggca cgccttgcca atatcggtac gttgatcgga tcgccgatca tctttggggc
    14941 gcctgaccaa ggcacgaaca gttcgcctcc aggcgagatt cgctggctgg gtggattgcg
    15001 gttttccggc tggctcgctc ggaatgccga cgaccagctc gatgtcctgg tggatggcga
    15061 actcgtcaca caaaccgaga catccggatg gtgcaacgtg ggcaccaacc cggattccgc
    15121 acgcgctgcg cgtgccttct cgatcgagct gccggagcgg ttcgccgatg gccacgcacg
    15181 gcagctttcg gtgacgagac acaacggcgc tgcgttgccc gggtgcccgg tcgcgttcgt
    15241 tgcctttgcg gacgggctcg cccgggccct cgcccgcatt gatgcgctgg agtcggagcg
    15301 cctgcgcgcc gaggagttcg atcgtctcgt tcccatgtcc ctgccctttt ccaagtatga
    15361 gggctggcgc gaacgcttcc cgccgccggc tgcgcgcgcg gccgcgtccg ccgcagtcgt
    15421 cattgtgggt ggcggtaaca tggaggatac gatcgaaagt ctgcaccgcc agactcacga
    15481 gcagtgggtg gcggtttcgc tccccgagag tgctgccgga gcggtgagtt tcgaccccgc
    15541 cctggtaacg gcctttctcg acggcgacgg gaatgcctgc gatttcgtca tgttcggact
    15601 ggcgggcacc gtgctcgctc caaccgcgct tgcgcggatc gccgacgcat ttgcacggtt
    15661 cgaggcggct tgcgccgtct atggcgatgt cgatctcacc ggcgagggcg gcgtggtctg
    15721 gccgctggcg ttttcagctt tcgactatga gcggctgctg gagcaaggct actgtgcgca
    15781 tttcttcgcg ctgcgcgccc ccacggccga gcaggccttg gcggccggcg catctgatct
    15841 gtatcgcctg ttcaacgcgg tgctcgacaa cgatccaagt cgttttgaga aaatagttca
    15901 catacccggt gccctcgccg ctttgcccca aattgatcca cacgcgttgc aaccggccct
    15961 tcgtgccgcg acgcgcaccc accttgaggc caggggtgtg gcagcaaacg tgggcccggg
    16021 tgaaggacac gtcatgcctg cggtgcgaat ctcgcgaacc atcgacaacg gcaggacgac
    16081 cgtcatcatt cccacgcgaa atcgccgaaa attgctagtc cagtgtatcg aatcgattca
    16141 gcctgcattg aaaagccggg ccgacatcat cgtcgtcgac aacgattcct ccgatccgga
    16201 cactcttgac tacctcgcca tgatcgaggg cgacgtcgct caggtgctgc gcgtccccgg
    16261 cgatttcaat tttgcgcggc tgaataatat ggccgcctct gttgccaaag gcgatcacct
    16321 gctcctgctc aacaacgaca tcaaggcgtt agatacggat tggcttgatg aaatgctcgc
    16381 ccgcttggcg gagcccgatg tcggtgccgt cggcgcgctg ctgctgtggc cgagcggcat
    16441 cgtgcagcac ggcggcgtgg tgctaggccc gggttttgcg gccacccacg cattcaatga
    16501 tcggatgagc ggagatgctg gctatggaga tttgctgcgc gtctcgcatc aatgcagcgc
    16561 tgtgacggct gcatgcctcc tcacccgccg cgccgatttt ctgttcgtgg gcgggttgga
    16621 cgagctgcgc tttccggtga atttcaacga cgtcgactat tgtttgaagc ttcgtgccgt
    16681 cggcaagagg attgtgttca ccccgcacgc caagctcctg cacattgaat cggcaagccg
    16741 cggtaacgat aaggcagccg acaagcgcgc ccgccttgaa cgcgaactca tcaacttgcg
    16801 gaccaaatgg ggcgccacgc tcgccgacga gtcctattac aacccaacgc tttcgctcga
    16861 tccgattgcg ttttcggcgc tcgcctggcc accgcgcgaa atggcgccgc gcaccgccca
    16921 ccgcccgcag ccggtgctgg ctccgcccgg attttgagcg agaattcgga gttggtcgta
    16981 cgcgatactc ggcattctaa ttgtcgcgaa taatatcgaa tttggatttc taattgcgtg
    17041 caattccccg gcgttctt
//
LOCUS       DATILV010000782         4579 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4530785, whole genome shotgun sequence.
ACCESSION   DATILV010000782 DATILV010000000
VERSION     DATILV010000782.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4579
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4530785"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(439..933)
                     /locus_tag="VLJ17_18845"
     CDS             complement(439..933)
                     /locus_tag="VLJ17_18845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25078.1"
                     /translation="MQAAPARTYDDVAATKNMIERTEETLGLKPDRLAETDSTGGAIS
                     HWVSSRKWRAAGGPVREGDPRRLRLAFSNRNAKRSLNSACKAMPGFATNTRDAEFERA
                     IHDAIATGAGLKEIGQAAADVAFASRSMRRMEICGSPRAGSASPTVPCSCAAQHSGRN
                     NGSS"
     gene            1139..1486
                     /locus_tag="VLJ17_18850"
     CDS             1139..1486
                     /locus_tag="VLJ17_18850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25079.1"
                     /translation="MTFRTVLLTSGLLVLCGGVAQAQSTSKPLLTLQMPALPDPVRVT
                     LNPATTALLVLDYVESICNSQPKCKSQMLPAMTPFMERARKAGLVVAYGTREPNMSSG
                     CRRSLQLRATSRS"
     gene            1483..1788
                     /locus_tag="VLJ17_18855"
     CDS             1483..1788
                     /locus_tag="VLJ17_18855"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HSV25080.1"
                     /translation="MNIAQDRFYNTDLDKALKAKGITTIIMVGWKVSGSVAYTSVGAT
                     LRDYTVVIPMDTTTAATDYETAIGFYQILNQGNGNLTNEPLKPKAPTLSRTDMITFQ"
     gene            2015..2257
                     /locus_tag="VLJ17_18860"
                     /pseudo
     CDS             2015..2257
                     /locus_tag="VLJ17_18860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612338.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS256 family transposase"
     gene            complement(2307..3212)
                     /locus_tag="VLJ17_18865"
     CDS             complement(2307..3212)
                     /locus_tag="VLJ17_18865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25081.1"
                     /translation="MNVRQWKIVLVVGLAAATTPALGQTVAPSGKSTQTSIPDFSGIW
                     WHQSLPGMEPPASGPGPVTNLVRRKDNGQSDYNQLVGNHRNPILTPNAAEVVKKYGDV
                     ALGGQVAPSPANQCWPEPLPFIYKNFAIQLLQQPHQVTILYEQDHEVRHVRMNQQHPT
                     PLTPSWYGDSIGHYETDTLVIDTVGTRPDRKYAMVDLFGTPFTEKLHVVERYRLVDFE
                     EAKEGLARDAKENWRPAGPARSTGTHLQVHFTVEDEGVFTTPWTGTVTYGRGSDDWPE
                     IVCAENIKKYYEPDTDVPTAAMPDF"
     gene            3530..4525
                     /locus_tag="VLJ17_18870"
     CDS             3530..4525
                     /locus_tag="VLJ17_18870"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HSV25082.1"
                     /translation="MKRLILIPLLFLWGHAAMAASPVIVDDNYVAEAIARNAVVWDVR
                     PADAYARGHIAGAVTIGDVPRVLRDDNTEDFIAVDRIEKILGAAGLDPHRETVVYGSR
                     GTWQPYFGLYTLQYFSGKNVRVYHEGIEGWTAAGRPVSRDASQLPPLALKLEINPTAA
                     VTTKEMVARLNNPDVQIIDARTPQEFAGEDIRAIRGGHIPGAINIPYEQNWVDPETPA
                     KLARKVVNSSAGMSLKRTADLKQLYSRFDPRKETIVYCQSGARASETAGVLQELGFTN
                     VKVYDSSWLGYGNTLDAPADNVTFFNVGQLNSRLSTLQDRVNQLEKELAEAKAPK"
BASE COUNT          891 a         1409 c         1361 g          918 t
ORIGIN      
        1 gatgattgcg atcggttacg acgatgccaa aaatgcattt ttgattcaaa actcgtgggg
       61 tcagtcttgg gcgaccaagg ggtatggctg gttcggatac gaattctgga agcgaaatgt
      121 cagcgccggc ttcgtagtcg aatagaactt gtttcgggcg ccggctccgc cttcgtccgt
      181 caaatgcggt cagatgtacg aatcgggtca tcttcgtccg tcacgataca ccgttgccga
      241 cggtcggttc catcccaagc gcaacctcgc ggctcaggac gcttttaaag aagcggcttt
      301 ccaactgctg tgaggaaggc ccggcgggct gctgcgagac gtggcttcag cttgcatctt
      361 tttcaccggt gaagcgcgct tcggccggat gaaccgcccg cgaccgtgct gggctcccaa
      421 catcgcgaat ggccgacgct atgacgagcc attgtttcta ccgctgtgct gcgcggcgca
      481 gctgcagggc acggtcggtg acgccgagcc ggcgcgcggc gagccgcaga tttccattct
      541 cctcatcgac cgcgatgcga acgcgacatc ggcggcggcc tggccgatct ccttgaggcc
      601 ggcaccggtc gcgatcgcgt cgtggatcgc acgctcgaac tcggcgtccc gcgtgtttgt
      661 cgcaaagccc ggcatcgctt tgcaggccga gttcagcgac ctcttggcgt tccggttgct
      721 gaaagcgagt cgtaagcggc gaggatcccc ctctctgacc ggcccccccg cggcgcgcca
      781 cttgcgagaa gaaacccagt gcgaaatggc gcctccggtc gagtccgttt ctgccagtcg
      841 gtctggcttt agccccaggg tctcttcggt gcgttcgatc atattcttgg tcgctgcgac
      901 gtcatcgtag gtgcgggccg gagcggcttg cacatcgacg atcccgcgtg ctcgatgttg
      961 atcagatggc gcgatcactc gaccgccccg tcggcgtggc gagcacgctt ggtggggtca
     1021 tgcggccgcg cgcgttggtg gtctttgcca agactgaaac aggaaagagg ctaattccat
     1081 tcggtcagaa ccgcattaat atgttcttac agtcccatcc tgttgaggag attcgaacat
     1141 gacgtttcgt actgttctcc tgacgagcgg tctcctcgtg ctgtgtgggg gagtggctca
     1201 agcgcaatcg accagcaagc ctttgctgac cctgcaaatg ccggcgctgc cggacccggt
     1261 ccgcgttacc cttaaccccg cgaccaccgc tttgctggtg ctcgactacg ttgagtccat
     1321 ctgcaattcc cagccgaagt gcaaaagcca gatgctaccg gccatgaccc catttatgga
     1381 gcgggcacgc aaggccggcc tggtcgtggc atacggcacc cgtgagccga acatgtcaag
     1441 tggctgccgg aggtcgctcc agctcagggc gacatcaaga tcgtgaacat cgcccaggac
     1501 aggttctaca acaccgatct cgacaaggcg ctgaaggcga aggggatcac gacgatcatt
     1561 atggtcggct ggaaggtcag cggctcagtg gcctacacct cggtcggagc gacactgcgc
     1621 gattacaccg tcgtcatccc gatggatacc accacggccg ccactgacta cgaaacggcc
     1681 atcgggttct atcaaatatt aaatcagggc aatggcaacc taaccaacga gcctttgaag
     1741 ccaaaagccc caacgctgag ccgtacggat atgatcacct tccaataaga gatcgcgagc
     1801 catggtatgc ccggccggcg cggtattcaa gacagtgtgg ggtgccaacg acaacctctc
     1861 gccgcctggg caaacttgcg gctattcgtt tttctagccc gagacttgtg gcaatcccgt
     1921 tagatgaaca ccgtacctga aacgtcagtt cagccgacga gctatcgccg gaagttgatg
     1981 acgtcgacga ccggaatcgc ggcatgtcgt gggggtgcat gaaccctcca cttctccatc
     2041 caacaagcga catgcagcca acgataacgt gtccaaactg attcagccag gatgcgctaa
     2101 cgatcagctc gcctaaatct tgcggcaggg cgcacgcacg gtgctggctc aagccatgga
     2161 ggtcgaggtc gcggattttc ccgcccaaca tgccgacctc aagaccgtgg aaaaccgcca
     2221 acgcattttg cgccgcggtc atccgcgcga gcgggagtta gaccgagatc ggccctgtcg
     2281 ctgtatactt cgccgtaaaa gatggcttaa aaatccggca tcgccgcggt cggaacgtcg
     2341 gtgtcgggtt cgtaatactt cttgatgttt tccgcgcaga cgatttccgg ccagtcgtcg
     2401 gagccgcgcc cataggtgac ggtcccggtc cacggtgtcg tgaatacgcc ctcatcctca
     2461 accgtgaagt ggacctgcag gtgcgtgccg gtcgaccgcg ccggccccgc cgggcgccag
     2521 ttctcctttg catcgcgcgc caggccttcc ttagcctctt cgaagtcgac cagccgatag
     2581 cgctccacca catgcagctt ctcggtgaag ggtgtgccga acaggtcgac catggcgtac
     2641 ttgcggtcgg gcctcgtgcc cacggtgtcg atcaccagcg tgtcagtctc gtaatgcccg
     2701 atcgaatctc cataccagga cggagtcagc ggggtgggat gctgctggtt catgcgcacg
     2761 tggcggactt cgtggtcctg ctcgtagagt atggtgacct ggtgcggctg ctgcagtagc
     2821 tggatggcga aattcttgta gatgaacggc agcggctcgg gccagcactg gttggccggg
     2881 cttggcgcga cctggccacc caacgcgacg tcgccgtact tcttcacgac ttccgccgca
     2941 ttgggcgtca ggatcggatt tctatgattg ccgaccagct ggttgtagtc gctctggccg
     3001 ttatccttgc gccgcaccag gttcgtgacc gggcctggcc ccgatgcggg cggctccatg
     3061 ccgggaagcg actggtgcca ccagatgccg gagaaatccg ggatgctggt ttgcgtcgac
     3121 ttgccggacg gagccactgt ctgccctagg gccggcgttg tggccgccgc caatccaaca
     3181 acaagcacaa ttttccactg ccgcacattc atgccaagcc tcccttttgc tccttcgtca
     3241 accgcatcgt ggactctagg cgcgtgcgca atggatttcg gccggcggta ttgcggcgtt
     3301 tggggccgcg ggacgtaagc cacgaaatcg acagcgcacg gaatagaaag ccttgcttgt
     3361 cccctctcgt acgctagggg acaggcgcaa ggtgaggggt ttgctgggcg ccatggccgc
     3421 ggtccagtcg acggactgga tcgctttcga aaattggtag aatatcgggc tcatcttgaa
     3481 gtcacggttg ccgatatttc gccacacgcc aagaaaaggg aaccctatca tgaaacgcct
     3541 gatcctcatt ccactgttgt tcctgtgggg ccacgccgcg atggccgcgt cccccgtcat
     3601 cgtcgacgac aactatgtcg ctgaggctat cgcgcgcaac gctgttgtat gggacgtccg
     3661 ccccgccgat gcctatgccc gagggcatat cgcgggcgcc gtcaccatcg gcgatgtgcc
     3721 cagggtccta cgcgacgaca ataccgaaga tttcatcgcg gttgaccgca tcgagaagat
     3781 actcggcgca gcgggactgg acccgcatcg cgagactgtc gtctatggca gccgcggcac
     3841 atggcaaccg tatttcggtc tctacacgtt gcagtatttc agcggcaaga acgtgcgtgt
     3901 ctaccacgaa ggcatcgagg gctggaccgc ggccggccgc ccggtcagcc gcgatgcttc
     3961 gcagcttccg cccctcgcgc tcaagcttga gatcaatccg acagcagcgg ttaccaccaa
     4021 ggagatggtg gcccggctca acaaccccga tgtgcagatc attgatgcac gcacgccgca
     4081 ggaattcgcc ggcgaagata tccgtgcgat acgcggtggg catattccgg gcgcaatcaa
     4141 cattccttac gagcagaact gggtcgaccc cgaaacccct gccaagctgg cgcgcaaagt
     4201 ggtcaacagc agtgccggca tgtcgctcaa gcggaccgcc gacctgaaac aactgtattc
     4261 gcgatttgat ccgcgcaagg aaacgatcgt ctactgtcaa agcggagcgc gcgcctcgga
     4321 gaccgcagga gttctccagg agctcggctt cacaaatgtt aaagtgtacg attcgtcctg
     4381 gctgggctat ggcaataccc ttgacgcacc tgccgacaac gtcacgttct tcaatgtcgg
     4441 gcagctcaac tcgcgcctgt cgaccctgca ggaccgcgtc aaccaacttg aaaaggaact
     4501 cgccgaggcg aaggcaccca aataactccg cgtccatggt tcgacggcct tacctcagat
     4561 cgcttccgtg gcggcggcg
//
LOCUS       DATILV010000783        11113 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2747665, whole genome shotgun sequence.
ACCESSION   DATILV010000783 DATILV010000000
VERSION     DATILV010000783.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 11113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11113
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2747665"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..968
                     /locus_tag="VLJ17_18875"
     CDS             <1..968
                     /locus_tag="VLJ17_18875"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV25083.1"
                     /translation="RRFVQIAGLAAAAPILLQRARALDYPTRPVRVIVPFAPGGPNDV
                     FARLLAQKLSEEFAKQFYVENLPGAGSTIGTAQAARAAPDGYTILVTSDAYVINPALY
                     AKIPYDPHKDCEPITLAVSLPQVLAVNSEVPARSIAELVTLVRANPGNYNYASPGTGT
                     QPHLVGEQFRISLHLDLVHIPFSGGAPAAAAVIAGHTPIYIGSPIPVVQQAKNGKLVA
                     LAVAGRRRASALPDVPTMAEAGYPDIEGEAWIGMFVPGGAPQEIIAALNHAGNGIIAL
                     PDIKERLETLGYLTVGSTSQEFAERIKTDLETWSRVIKGAGITPQ"
     gene            1039..2013
                     /locus_tag="VLJ17_18880"
     CDS             1039..2013
                     /locus_tag="VLJ17_18880"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSV25084.1"
                     /translation="MEFHRRHFLRLTTIAGAACTLRGRALDYPTRPVRIIVAFAPGGP
                     TDIFGRIAAQKLSEQFGKQFYVENIGGGGGNIGAAQAARAAPDGYTILFTVSALVTNP
                     AFLGKAPYDPIQDFAPVAIPIASAITIVTHPSLGVRTLDELITLVRANPGTYTYASGG
                     AGAQPHLAFEQFRLSLGLDIVHVPFAGAGPAVASIVAGHTPIGVSSLPPCVPHIQEGS
                     LRALVLSSTKRSQKLPDIPTAAEAGHPIFTGDQWLGVLVPAGTPEEIVSLLYHTIVDI
                     TVQPDVKERLAALDFYQIQSTPQQFADRIKVELQSWRKVVQAAHINPG"
     gene            2137..3720
                     /locus_tag="VLJ17_18885"
     CDS             2137..3720
                     /locus_tag="VLJ17_18885"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HSV25085.1"
                     /translation="MHAMTRLMLGICSATLAITGTDAATITGTVTGPDGKPFRGAFVQ
                     ARNVKTKITVSVLSDNAGKYRVENLGPGEYRLQMRAIGFKADPKSGITLTVDQNLTQD
                     LALQQGMVRWSDISMHQGKKLLPETRGKDEFFTHCMACHGFESRMAAVVRDEDGWRDR
                     VTYMREAMGFFLMDRRFGFNDQKFENVVHYLNEMFGENSKLPKSPADLPQYQSEVRPI
                     GDEGLKIVYVEYDTPGPNRMPWSAHPDKDGTFWVPYYGRANKIGHLNPVTGEIKEYPV
                     PNIGTAAIHSAVPAPDGSVWLTEQGSNKLGRWDPKTEQITEYLDADPKSGAAMRKHTV
                     RVDPKTGMIWSTGVLSVFDPKTEKFTHIPEVPTCYGIALDQEGNAWFTELTPTGKVGK
                     VDAKTLAVTKYTLPTANGRPRRIQVDEAGIVWFGEFDAGKIGRLDPKTGAITEFQLPG
                     PQPTPYALGIDRDGMVWYSSEYMDVIGRLDPNTGKVVEYPYPRAENSMRDFFMDDQGR
                     MWFGSPVNDKVGYFYVAKQ"
     gene            complement(3857..4834)
                     /locus_tag="VLJ17_18890"
     CDS             complement(3857..4834)
                     /locus_tag="VLJ17_18890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015685885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSV25086.1"
                     /translation="MGKLIFATAALTTILGGMGAAVAQTYPLRPVMMIVPLATGGSTD
                     TIARIMAEGMRSVLGQPVIVENVTGAGGSIGVGRIARSAPDGYTIGIGQWGTNMANGA
                     IYPLQYDLVQDFEPVALIASQPFLIVARRTMPANTLPDLIAWLKANAGKASQGNSGVG
                     TPSHVAGILFQNLIGVRYQMVPYRSAGLSMQDLVAGQIDVLLDTPATSMSQVNAGTLK
                     AYAVTAKSRLAIAPDIPTVDEAGLPGFYFSFWHAFWVPKGTPKAIVAKLNEAVVSALA
                     DPVVRKRLTDIAQDIFPREQLTPEALLAYHKAEIEKWWPIIKAANIKAE"
     gene            4982..5908
                     /locus_tag="VLJ17_18895"
     CDS             4982..5908
                     /locus_tag="VLJ17_18895"
                     /inference="COORDINATES: protein motif:HMM:NF037995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HSV25087.1"
                     /translation="MGARTQIRMGGYGPATTGFSRALKRIGDRLECEFGDHVDIKYVW
                     NIMDLGYQAQDILWLVEHGLLTLGYQSSSYLTDRVAELGLVDLPFLFDTTERARASID
                     GALGQMLGSKIEERAGYRILGFFENGFRHLSNRLRPVRTPSDLAGMRIRVLPSKVHER
                     TFELMGAAPLRMDLTAAIAMIVAGELDAQENPLSNTVTYGVHKFHRFHTLTNHFYISR
                     PIFVHRATFDAWPNDLQTAMRSAVTDAIALQRDLHVREEEDARAAIAAAGCEIIELTP
                     DQHNAFAAAVKPIYGEARQQYGDGLLALAGVD"
     gene            complement(5917..6324)
                     /locus_tag="VLJ17_18900"
     CDS             complement(5917..6324)
                     /locus_tag="VLJ17_18900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25088.1"
                     /translation="MQKTPPTSYVRRPSAQILEALQRAFTAFQTGKLGEAEALFKKVP
                     FKDTSQFDALNMLAVIHAQRGDYSEGIRLVSRARWSPIQTSLKPISPSAACRPSTPPP
                     ATLWMGLPVHIDAAYAQMWERSQRGERAYRIRR"
     gene            complement(6505..8181)
                     /locus_tag="VLJ17_18905"
     CDS             complement(6505..8181)
                     /locus_tag="VLJ17_18905"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HSV25089.1"
                     /translation="MRMKHFAAILLAGTSTIAFQGTSWAQSAPALRGEVRSAEEGPMG
                     GVTVTAARDKSTISLTVTTDDQGHYSFPADRLGPGAYSLTIRAAGYDADGKPTANVAA
                     EQTVTADIKLKKTRNLMAQLTSAEWLASWPGTDAEKRLVADCMSCHTLERIARSNHPA
                     EEWVAIIPRMLRYAQNTTPLAPQMRTGESTGLLVQQPERLQRLADYLASVNLSTSETF
                     PYELKTLKRVSGKGTRAIITTYALPKRTDQPHDVMGDPDGGIYFTYFGDPQLGRLDPK
                     TGEVTSYPIPILKEKAAKGALSLYHDHDGNFWVSLMYQAGGAKFDKATKSFTMLPVAP
                     EFSRDSSQQAFVAPQSSHVDGKLWIQDVASTSVFRVDLKTGKFENFKPYADIKPDSPL
                     AGRPHSIYEIFPDAQNNLYLADFSDRAIGRIDAKTGEYTFIQTPTDRSRPRRGEMDKE
                     GRLWFAEYAVDNVAMLDTKTNRIQEWTVPTKWSLPYQAKIDKNGDLWTGGMASDRIAR
                     INTKTGDMVEYPLPVNTNIRNLYIDNATTPISVWLGNNHGAAIVKLEPLD"
     gene            complement(8418..8855)
                     /locus_tag="VLJ17_18910"
                     /pseudo
     CDS             complement(8418..8855)
                     /locus_tag="VLJ17_18910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011239636.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            9126..10607
                     /locus_tag="VLJ17_18915"
     CDS             9126..10607
                     /locus_tag="VLJ17_18915"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HSV25090.1"
                     /translation="MTSQHHGTIDRRLLLGAAGALTLAGQSALAQETKTETKPADGPA
                     KRLSDTIADFVVGFGPATLPPLAVERVRLAFIDTVAVMLAGGREEGTGMVCEMVQQEE
                     AAPKISVVGQSFKTSPQLAALANGVAAHIMDYDFSSLLGQPTSPIIPALLPLAESIGA
                     TPAEVAAAFIVGFEVCLKLARAAPEQTSVGGWHAVSSIGTMGAAMACARLLKVPRERI
                     ADVLGVAASLSGGLSANFGTMTKPLHSGTSARNAIVAATLGRSGFTANATALEHPASG
                     YFHAFDRGIKVSFEPIAELGRHYDIVERGFKPKRYPCGGLSHTAIDATLELRGEVNVA
                     DITAITTSITKFAASRIGSAYPTSIESAKFSMPYVAAYTALYGPPMLKAFTEDAIRDE
                     AVKALARKVSVAIDPEFADILEESPSRVTVTLADGRIVRKMRYYASGTPQAPLTKEQV
                     EEKFFSCAERAVDKASATKIFAFLNRLEQEQSFAELWGLVRRA"
BASE COUNT         2140 a         3439 c         3427 g         2107 t
ORIGIN      
        1 gccgtcgatt tgtacagatt gctgggctcg ccgcggccgc tcccatccta ttacaacgcg
       61 cacgggcgct cgactatccg acacggccgg tgcgcgtcat tgtgccattt gcaccgggtg
      121 gtccgaacga cgtgttcgcc cgtctattgg cgcagaagct tagcgaagag ttcgccaagc
      181 agttctacgt tgagaacctc ccgggtgcag gcagcaccat cggcactgca caagctgctc
      241 gggccgcgcc cgatggctac accatcctcg tcacctccga tgcctatgtc atcaacccag
      301 cgctgtatgc caagatcccg tacgatcccc acaaggactg cgaacccata acgctcgcgg
      361 tctccttgcc gcaggtgctt gccgtcaatt ccgaggtgcc agcaagaagc atcgcggaac
      421 tcgtcactct cgtgcgggcc aaccccggca actacaatta tgcgtcgcct ggaaccggta
      481 cccagccgca tcttgtaggc gagcaattcc gcatatcgtt gcatctcgat ctcgtgcaca
      541 ttccgttttc cggtggggcg cccgcagccg ctgcggtcat cgcggggcac acgccaattt
      601 acattggatc gccgatacca gtggtgcagc aggccaagaa cggcaagctc gttgcgctcg
      661 cggtcgccgg ccggcgccgc gcttcggctt tgcccgatgt gcccaccatg gcggaagccg
      721 gctatccgga tatcgaggga gaagcttgga tcggcatgtt cgttccgggc ggggcgccgc
      781 aagagattat cgccgcgctc aatcacgccg ggaacgggat catcgcgctg ccggacatca
      841 aggagcggtt ggaaacgctc ggctatctga cggtcgggag cacgtctcag gaattcgcgg
      901 aacgcatcaa gaccgacctc gaaacctgga gcagagtaat taagggggcc ggcatcacgc
      961 cgcagtaatc gtcggcaaaa gccgggatca ttccgtcggc gaccttatgt caacgtcttt
     1021 cgccaaggga ggaatatcgt ggaatttcac cggcgccact tcctgcgact cacgacgatt
     1081 gccggcgcgg cgtgcacgct acgcgggcgc gcgctcgact atccgacgcg accggtgcgc
     1141 atcatcgtgg cattcgctcc gggcggtccg accgatatat tcggacggat cgccgcacag
     1201 aagctctccg agcagttcgg caagcagttc tatgtggaga acatcggtgg cggcggcggc
     1261 aacatcggcg ccgcgcaagc tgcgcgagca gcgcccgacg gctatacgat cctgttcacc
     1321 gtcagcgccc tcgtcaccaa tcccgcgttc ctgggcaagg ctccctacga tccgatccag
     1381 gatttcgcac cggttgcgat tcccatcgcc tccgcgatca cgatcgtgac tcacccttcg
     1441 ctgggagtga ggacccttga tgagctgatc acactcgtca gagctaatcc cggaacgtac
     1501 acctacgcgt ccggaggcgc gggtgcccag ccccatctcg ccttcgagca attccgactg
     1561 tcgctcggtc tcgatattgt gcatgttccc ttcgcgggcg ccggcccggc ggttgcctcc
     1621 attgtggcag gtcacacccc gatcggcgtc agctcgctgc cgccctgcgt gccgcatatt
     1681 caagaaggga gtttgcgtgc gctcgtgctg tcgagcacga agcgctcaca gaaactgccc
     1741 gacattccga ccgccgcgga agccggccat ccaatattca cgggagatca gtggctcggc
     1801 gtcctggtgc cggccggaac accggaagag atcgttagcc tgctctatca cacgatcgtg
     1861 gacatcaccg tgcagccgga cgtgaaggag cgcctcgctg cactcgattt ctaccagatt
     1921 caaagcacgc cccagcagtt cgccgatcgg atcaaggtcg agctgcaaag ttggcgtaaa
     1981 gtggttcagg cagctcacat caatccaggg tgacggtgtt ttcggattgc acgctgtgag
     2041 ccggtggcgc catggcgtcg gattgggata agctttgcag gaccaaaaac gggacaaaaa
     2101 aacaggacca aaaaaacagg accaggagga acggccatgc atgccatgac acgtcttatg
     2161 cttgggatct gctcagccac tttggcgata accggtacgg atgccgcgac gatcaccgga
     2221 actgtaaccg gccccgacgg caagccgttc cgcggcgcct tcgtgcaagc gcgaaacgtg
     2281 aagaccaaga tcaccgtcag cgtcctgtcg gacaacgccg gcaagtatcg cgtcgaaaat
     2341 cttggccccg gcgaataccg gctgcaaatg cgtgccatcg gcttcaaggc cgacccgaag
     2401 agcggcatca cgctcacggt cgaccagaac ctcacccagg acctcgccct gcaacagggc
     2461 atggtgcgct ggagcgacat ctccatgcac cagggcaaga agctcctgcc cgaaacccgc
     2521 ggcaaggatg aattcttcac ccactgcatg gcgtgccacg gcttcgaaag ccgtatggcg
     2581 gcggtggtgc gcgacgagga cggctggcgc gaccgggtca cctacatgcg cgaggccatg
     2641 ggcttcttcc tgatggaccg gcggttcggt ttcaacgacc agaagttcga gaatgtcgtc
     2701 cactacctca acgagatgtt cggggagaac tccaagctgc cgaaatcgcc tgccgatctg
     2761 ccgcaatacc agagcgaagt tcgtccgatc ggcgatgagg gcctcaagat cgtctacgtc
     2821 gaatacgata cgcccgggcc caaccggatg ccatggagcg cgcatcccga taaagatggc
     2881 acgttctggg tgccatatta cgggcgcgcc aacaaaatcg gtcacctcaa tccggtgact
     2941 ggcgaaatta aggaatatcc ggtccccaac atcggcaccg ccgctatcca ctcggcagtg
     3001 ccggcgccgg acggcagtgt gtggctcacg gagcagggtt cgaacaagct cgggcgctgg
     3061 gaccccaaga ccgagcagat caccgaatat ctcgatgccg atccgaagtc aggcgcggcc
     3121 atgcgcaagc acaccgtccg ggtcgatccc aagaccggga tgatctggtc gaccggtgtc
     3181 ctatcggtgt tcgatcccaa gacggaaaaa ttcacccaca tcccggaggt accgacctgc
     3241 tacggcatcg cgctcgacca ggaaggcaat gcatggttca ccgagctcac cccgaccggc
     3301 aaggtcggca aggtcgacgc caagacattg gccgtgacca aatacaccct gccgaccgcg
     3361 aacggccgcc cgcgccgcat ccaggtcgat gaagccggca tcgtgtggtt cggcgagttc
     3421 gacgccggca agattggccg gctcgacccc aagaccggcg ccatcacgga gtttcagctc
     3481 ccgggcccgc agcccacgcc ctatgcgctg ggcatcgatc gggacggcat ggtgtggtac
     3541 tcatccgaat acatggacgt cattgggcgg ctcgatccca acaccggcaa ggtggtggaa
     3601 tatccctacc cacgcgcgga aaactccatg cgggatttct tcatggatga tcaaggccgc
     3661 atgtggttcg gctcgccggt gaacgacaag gtagggtatt tctacgtggc gaagcagtga
     3721 gcggatggcg taggagcttt cgccgtaacc cacatcgtca tggccgcgct cgtcgcggcc
     3781 atccacctct tgctcggggt gcttcggcag aggaagatgt agatggcggg accagtccgg
     3841 ccatgccacc ccttcctcac tccgccttga tattcgcggc cttgatgatc ggccaccatt
     3901 tctcgatctc ggccttgtga taggccagca gcgcctcagg ggtcagctgc tcgcgcggga
     3961 aaatatcctg cgcgatatcg gtgaggcgct tgcgcaccac gggatcggcg agcgcactca
     4021 cgacagcctc gttgagcttg gcaacgatgg ctttcggcgt gcctttagga acccagaaag
     4081 cgtgccaaaa ggagaaatag aatcccggca atccggcttc gtcgaccgtc gggatatcgg
     4141 gcgcgatcgc gaggcgactt ttggccgtca ccgcataggc ctttagcgtg ccggcgttca
     4201 cctgcgacat cgatgtggcg ggcgtatcga gcaggacgtc gatctgccca gccacgagat
     4261 cctgcatcga caggccggcg ctgcggtagg gcaccatctg gtagcgcacc ccaatgaggt
     4321 tttggaacag gatgccggcg acatggctcg gggtcccgac gccggagttg ccctgggagg
     4381 ccttaccggc gttcgccttc agccaggcaa tgaggtcggg gagcgtgttc gccggcatgg
     4441 tcctgcgggc gacgatcagg aacggttggc tcgcaatcaa ggcgaccggt tcgaaatcct
     4501 gcaccaggtc atattgcaat ggatagatcg ccccgttcgc catgttggtg ccccactggc
     4561 cgatgccgat ggtatagccg tcgggcgcgg agcgggcgat ccggccgacg ccgatcgagc
     4621 cgccggcgcc cgtgacgttc tcgacaatga ccggttggcc gaggacgctg cgcatgccct
     4681 cggccatgat gcgcgcaatg gtgtcggtcg agccgccagt cgcaagtggc acgatcatca
     4741 tgacggggcg caacggatag gtttgcgcga cggcagcgcc catgccaccc aagattgtgg
     4801 tcaatgcggc ggtagcaaat atcaacttgc ccatgttggc cctcgatggg tcggtacagc
     4861 gtttcctctc aggccgcttg agaccggccg cgttttccct tttgccggag accggtttag
     4921 catgaggcgt ggctagaaga cgaccggcca cccgcataat gcagcgtttc cggggtaccg
     4981 aatgggcgcg cgcacgcaaa ttcgcatggg cggttacgga ccggcgacca cgggcttcag
     5041 ccgcgcatta aagcgcatcg gcgatcggct ggagtgcgag ttcggcgacc acgtcgacat
     5101 caaatacgtg tggaacatca tggatctggg ctaccaggcc caggatattt tgtggctggt
     5161 ggagcatggg ctgctcacgc tcggctatca gtcgagcagc tatctgaccg atcgggttgc
     5221 ggaactcggg ctggtcgatt tgccgttcct gttcgacaca acagaacgcg cacgcgcctc
     5281 tatcgacggc gcgctggggc agatgctggg gagcaaaatc gaggaacgcg cgggctatcg
     5341 cattctcggc ttcttcgaga atgggttccg gcatctctcg aaccgcctgc ggccggtgcg
     5401 cacaccgtcg gacttggccg ggatgcggat cagggtactg cccagcaagg tccacgagcg
     5461 aaccttcgag ctcatgggcg cggcgccgct gcgcatggac ctcaccgcag caatcgccat
     5521 gattgtcgca ggcgaactcg acgcgcagga gaatccgcta tcgaacaccg tcacctacgg
     5581 agtgcacaag tttcaccgtt ttcacaccct caccaaccac ttctatatct cgcgaccgat
     5641 cttcgtgcat cgcgccactt tcgatgcctg gcccaatgat ctccagaccg ccatgcggag
     5701 cgccgtaacg gacgctatcg cgctccaacg cgatctacac gtacgcgaag aggaggatgc
     5761 gcgcgccgcc atcgcggccg ctggctgcga gattatcgaa ttgacccccg accaacacaa
     5821 tgccttcgcg gctgccgtca agccgatcta cggtgaggcg cgccagcaat acggcgatgg
     5881 cttacttgcg ctcgccgggg tggattaagc caaggttcaa cggcgaatcc tgtaggctct
     5941 ttcgcctctt tgagatcgct cccacatctg cgcataagcg gcatcgatat gaaccggcaa
     6001 ccccatccac agcgtcgctg gcggtggtgt actcggcctg catgcggccg agggtgatat
     6061 gggcttcagc gaagtttgga ttggcgacca gcgcgctctg gagaccagac gaattccctc
     6121 ggaataatcc ccacgttgtg catgaatgac ggccagcatg ttcagtgcat cgaactgcga
     6181 ggtgtctttg aacgggactt ttttgaacag ggcttccgct tcgcccagtt tgccggtttg
     6241 aaaggccgtg aacgcacgct gtagagcttc gagaatctga gcagatggcc ttcgaacgta
     6301 gctggttggc ggtgtttttt gcattcaccg gaacctattt tggacgtatc acgcttagga
     6361 tcggatcacc gaatcaaccc ggtaaattag cgctcagagc gcaatagcga agcgtattac
     6421 accgatcttt ggcaagatga gcggctcgcg gcggaatacg ctggcgcgct attgcgcccc
     6481 acaggctcct gatgcggcga cgcctcagtc cagcggctcc agcttcacga tcgcggcgcc
     6541 gtggttgttg cccaaccata ctgagatcgg tgtcgtcgca ttatcgatgt aaagattgcg
     6601 gatattagtg ttcactggca gcggatattc caccatgtcg ccggtcttgg tgttgatgcg
     6661 cgcaatgcgg tccgacgcca tgccgccggt ccagaggtcg ccgttcttat cgatcttggc
     6721 ctggtagggc agcgaccact tggtcggcac cgtccattcc tggatgcggt tggttttggt
     6781 gtcgagcatc gccacgttgt ctaccgcgta ttcggcgaac cacaggcgcc cctccttgtc
     6841 catctcgccg cggcgcggtc gcgaacggtc ggtgggggtc tggatgaacg tgtattcccc
     6901 ggtcttggca tcgatgcggc cgatggcgcg gtcgctgaag tcggcgaggt agagattgtt
     6961 ctgcgcgtcc gggaaaatct cgtagatcga gtgcggacgc ccggcgaggg gtgaatccgg
     7021 cttgatgtcc gcatacggct tgaagttctc gaacttgccg gtcttgagat cgacccggaa
     7081 caccgatgtc gaggcaacgt cctggatcca cagcttgccg tccacgtggg aggactgcgg
     7141 cgccacaaaa gcctgttgcg agctgtcgcg actgaactcc ggtgccaccg gcaacatggt
     7201 gaacgacttg gtcgccttgt caaacttcgc gccgccggcc tgatacatca gcgagaccca
     7261 gaaattaccg tcatggtcgt gataaaggga gagcgcgccc ttggcggctt tctccttcag
     7321 gatcgggatc ggatatgacg tgacctcacc ggtcttcgga tcaagccgac cgagctgcgg
     7381 gtcgccgaaa taggtaaaat agatgccacc gtccggatcg cccatcacgt cgtggggctg
     7441 gtcggtacgc ttcggcaggg cgtaggtcgt aatgatggcg cgagtgccct tgccggagac
     7501 acgcttgagc gtcttgagtt catacgggaa ggtctccgac gtgctcaagt tgaccgaggc
     7561 caaatagtcg gcaaggcgtt gcaaacgctc gggctgttgt accaacaagc ctgtcgattc
     7621 gccggtccgc atttgcggcg ccagcggcgt tgtgttctgg gcatagcgca gcatgcgcgg
     7681 gatgatggcc acccactcct cggccggatg attggagcgt gcgatgcgct ccagcgtgtg
     7741 gcagctcatg cagtcggcaa ccaggcgctt ctccgcatcg gtgccgggcc agctcgcaag
     7801 ccattcggca ctggtgagct gagccatgag attgcgggtc ttcttgagct tgatgtcggc
     7861 ggtcacggtc tgctccgcgg cgacgttcgc ggtcggcttg ccgtcggcgt catagccggc
     7921 cgcgcggatc gtcaacgaat acgcgcctgg accgaggcgg tcggctggga agctgtaatg
     7981 gccctggtcg tccgtggtca ccgtcaagga gatggtggac ttgtcccgcg cggccgtcac
     8041 ggtgacaccg cccatcggcc cttcttcggc cgagcgcacc tcgcccctga gggcgggcgc
     8101 gctctgcgcc catgaggtgc cctgaaacgc gatggtcgaa gttccggcta gcagaattgc
     8161 ggcgaaatgc ttcatgcgca tggcgttttc tcctcctgag gcggtcgttg cgcctgacca
     8221 gcagcgctgc cacgacatgc catccaacga caatttgctt attgcaaaaa gcgtaagctc
     8281 acgaatttcg acggtcaagc attagcaacc ctagaaacct cacgacctca tcctagaagc
     8341 gcgctcttgc gagtctggaa gaatggtagt gagtccgtgc cctgcaccca tccttcgaga
     8401 cgcccgctcg cgggatcgat cttgatgttg gcgtcctcca gcaccttatg aatgcgttgg
     8461 atatgtcggc tcctttcgcg caccagctgc ttgcgggtac gcggcagggc gcagttcctg
     8521 cgtctggccg tccgggacaa ggccgaatca agccgtgtgc cagaagttcc gcgagccggg
     8581 cggcgtcgct tacgtcagtc ttgcgcctag tacgttcttc atatgtgcgg catgggccac
     8641 aacgagttcg atctcgccgt caggctgcac atgccacaca ggctccaata cacgccgggt
     8701 cgtctccatc gcgacatgct tgcagccaac agacccgccg tcgtcgtcgc aaacgctctc
     8761 acctcggtga tgacaagtcg caccgcagcc accacggtct ttttgtgaac atccaacccg
     8821 gcacaacgtt gatgcaagac cttcgtatcc tccatcaaag tgccgccggc gaagggagct
     8881 caattcaaag aaattctcgt gcgcgtgctc cacggcccag tggaccgatt ggcgacaatc
     8941 agttgggctc caaggtccca cggtccaact caggatcagg ctaattgcac cagggagtta
     9001 ccgacctctg tgccgactgc ccgcagcagg gggggcgcgt tcgcaggggt cggccccgcc
     9061 ggtgggcaac tcaggtgagg cagattagaa tgaatgaaag tccgcatgtt ggacgggagg
     9121 atcgcatgac ttcgcagcac cacggcacga tcgatcggcg gctgttgctc ggcgcggctg
     9181 gcgcgctgac gctggcggga caatcggcgc ttgcgcaaga gacgaaaacc gaaacgaagc
     9241 cggcggacgg accagccaaa cgcctcagcg acaccatcgc ggatttcgtc gtcggcttcg
     9301 gtccggcgac acttccgccg cttgccgtcg agcgggtgcg gctcgccttc atcgataccg
     9361 ttgccgtgat gctggccggc ggccgcgagg agggcaccgg gatggtctgc gaaatggtgc
     9421 agcaagagga ggctgccccc aagatttcgg tagtcggcca gtcattcaag acctcgccgc
     9481 agcttgcggc tctggccaac ggcgtcgcgg ctcacatcat ggactacgac ttttcctcgc
     9541 tgctcggcca gccgacctcg ccgatcattc cggcgctgct gccactcgcc gagagcatcg
     9601 gggcaacgcc cgccgaggtg gcggcggctt tcatcgtcgg cttcgaagtg tgtctgaagc
     9661 tcgcccgcgc cgcgcccgag caaacgtcgg tcggcggctg gcatgcggtg tctagcatcg
     9721 gcaccatggg ggctgccatg gcgtgcgcgc gccttctcaa ggtgccacgc gaacgcatcg
     9781 cggatgtgct cggcgtcgcg gcgtcgctgt cgggcgggct gtccgccaat ttcggcacca
     9841 tgaccaagcc gctgcactcc ggcaccagcg cccgcaacgc catcgtggcc gctaccctcg
     9901 gccgcagcgg ttttacggcg aatgccacgg cactggagca tccggcgtcc ggctatttcc
     9961 acgctttcga tcgcggcatc aaggtgtcgt tcgagccgat cgcggagctc gggcggcact
    10021 acgacatcgt cgagcgcggc ttcaagccca agcgctatcc gtgcggcggc ctcagccaca
    10081 ctgcgatcga cgcaacactc gaattgcggg gcgaggtcaa cgtcgccgac atcaccgcca
    10141 tcacgacgag cattaccaaa ttcgccgcct cccgcatcgg ctcggcctat ccgacctcga
    10201 ttgagagcgc gaaattcagc atgccctatg tggcggccta tacggcgctc tacgggccgc
    10261 ccatgctcaa ggcatttacc gaggatgcga tccgcgacga ggccgtgaag gccttggccc
    10321 gcaaggtgtc ggttgcgatc gatccggaat tcgccgacat tctggaggag agcccgtcgc
    10381 gcgtgacggt gacgcttgca gacggccgca tcgtgcggaa gatgcgctac tatgcgagcg
    10441 gcacgccgca agcgccgctg accaaggaac aggtcgagga aaagttcttc tcctgtgccg
    10501 agcgcgccgt cgacaaggct tcagcgacga agatctttgc gtttctcaac cggttggagc
    10561 aggagcaatc attcgccgag ctctgggggc tggtgaggcg ggcgtaatgc atcgttgcgg
    10621 ttatctcctt ttgctcatga atttataggt gctatggagg accgcacgcc tgcgccgcag
    10681 ggactggaat gccgcgaaaa atcttgaacg tctggccgca agctttgcgg tgtcagcctg
    10741 tggagatctg gcgcggctcg caagagtcgc gtgagacggg cctcaaagaa gcagaaaccg
    10801 aacggcatta gcgagctttg ggcagcttag ctcaactttg cgtaggtttc gcaaagcggg
    10861 ccggcaacgc aaaatcgcgc ggccacgctc cgcatgctcg tatttttgtg gtatagcacg
    10921 caggatgggt tgagcggcgc gaagggccat caaacaaaag aacgatgggt ttggctcgct
    10981 caactcgtgc gatgcgtgtt ccaccgggac atcgcgccac aagtctcaac agggaggact
    11041 gtcatgcgca atgcagatcg cgtcaaatta ttgtgcggaa tcgcggtggc cgcgatcgcg
    11101 atgtcggccg cgc
//
LOCUS       DATILV010000784         2619 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1211165, whole genome shotgun sequence.
ACCESSION   DATILV010000784 DATILV010000000
VERSION     DATILV010000784.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2619)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2619)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2619
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1211165"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..295
                     /locus_tag="VLJ17_18920"
     CDS             <1..295
                     /locus_tag="VLJ17_18920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSV25091.1"
                     /translation="ARMKPSAFLVNVARGRVVDEPALVEALAGHRIAGAALDVTVEEP
                     LPPNSPLWGMEHVLITPHTAGETRRYEDNVIEILRDNLERLWRGESQLRNQVV"
     gene            412..1026
                     /locus_tag="VLJ17_18925"
     CDS             412..1026
                     /locus_tag="VLJ17_18925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018183850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lectin"
                     /protein_id="HSV25092.1"
                     /translation="MLASNGAAQAQQAGMSFFVTSNGVGKGADLGGIEGADRHCQQLA
                     QAAGAGSRTWHAYLSTQAADGKPAVNARDRIGKGPWQNSKGVVIAKDVDDLHSANNNL
                     NQQTALTERGTMVAGVGMQPNWHDVMTGSQADGRAFQANLNLTCNNWSSSTFGSTMLG
                     HIDRTPKTPPNLESWNAAHMSRSCSQPDLIATGGNGLFYCFAVQ"
     gene            1161..1943
                     /locus_tag="VLJ17_18930"
     CDS             1161..1943
                     /locus_tag="VLJ17_18930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009859192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ThuA domain-containing protein"
                     /protein_id="HSV25093.1"
                     /translation="MRLSSIWKLMPAIALGAMFATVLAITDLPVRAQDRPNRILYFTH
                     SAGYRHEVIPVSREILRQLGEISPRFEVVATEDAEVFTAENLRRFGAVMFFTTGELPM
                     NEAQKQAFINFVRDGGGFLGVHSATDTFYRWPDYGKLIGGYFDQHPWHQTVRIDVADR
                     SDPLVAFIGPSMVLSDEIYQIRDFDVGSSHVLLRLDPTSVDLTRNNVHRHPYGWPLAW
                     TRTFGSGRVFYTALGHEEAVWRDSRYQTLLRNAVQWAIGGAR"
     gene            2032..>2619
                     /locus_tag="VLJ17_18935"
     CDS             2032..>2619
                     /locus_tag="VLJ17_18935"
                     /inference="COORDINATES: protein motif:HMM:NF012417.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSV25094.1"
                     /translation="MHDVTSDHWHEPEGMKNAGYGAWRRPNTPYDDYMEAQGIPIFRG
                     IGVRRVQDMALKRWDRMGGNGTFIQLYGTEGKWGCYVVEVPGAGALNPERHMYEEIMV
                     VVEGRGTTEVWTDDQRKPHTFEWGRGSMFAIPLNCWHRIINAASSPALILVASTAPNV
                     MNVFRDSDWIFNCPVTFPSRFDGSQDFFKPKDEIVP"
BASE COUNT          501 a          818 c          823 g          477 t
ORIGIN      
        1 cgcgcggatg aagccttcag cctttctggt gaacgtggcg cgcgggcggg tcgtcgacga
       61 accggcgctg gtcgaggcac ttgccggaca ccgcatcgcc ggtgccgccc tcgatgtgac
      121 cgtcgaagag ccgctgccgc cgaactcccc gctctggggc atggagcatg tgctgatcac
      181 gccgcacacc gccggcgaga cgcggcgcta cgaggacaat gtgatcgaga tcctgcgcga
      241 caatctcgaa cgcctgtggc gtggcgaatc acaactgcgt aaccaggtgg tctgaccggc
      301 tccgccgctg cgtgctccgt gctaccttga tccaaaggcc gcaaggtgcg tcgatcgagg
      361 gaggatagaa tgaggacatc tggctggata ggggcggcga cggcattgtt gatgctggcc
      421 agcaacggcg cggcgcaggc gcagcaagcc ggcatgagct tcttcgtgac cagcaacggc
      481 gtcggcaagg gcgccgatct tggcggcatc gaaggtgccg accggcattg ccagcaattg
      541 gcgcaggcgg ccggcgccgg tagtcgcacc tggcatgcct atctcagcac ccaggcggcg
      601 gacggcaagc cggcggtcaa cgcccgcgac cgcatcggca aggggccgtg gcagaattcc
      661 aaaggcgtcg tgatcgcgaa ggacgtcgac gacctgcaca gcgccaacaa caatctcaac
      721 cagcagaccg cactcacgga acgtggcacc atggtcgccg gcgtcggtat gcagccgaat
      781 tggcacgacg tcatgacggg ttcgcaggcc gacggccgcg cgttccaggc gaacctaaac
      841 ctgacctgca acaactggtc tagcagcacc ttcgggtcga ccatgctggg ccacatcgat
      901 cgcaccccca agaccccgcc gaatctggag tcctggaatg cggcccacat gtcgcgcagc
      961 tgtagccaac ccgacctgat tgccactggc ggcaacggct tgttctactg cttcgcagtg
     1021 caataggtga cacgcaaggt ctagtagatc gagtggggcg ggccttaacc cgcccttcca
     1081 tgcgagacac tgggtcaagc aaacccgtct tacactgacc gatgtggtgc ggacttctcg
     1141 gtggaagggg cgttgcggcc atgcggcttt cttcgatctg gaagttaatg ccggcgatcg
     1201 cgttgggcgc gatgttcgcc acagtgctcg caattaccga tctcccggtg cgcgcccagg
     1261 atcgacccaa tcgcattctc tatttcaccc actcggccgg ttaccggcat gaagtcatcc
     1321 cagtgtcccg tgagatattg agacagcttg gcgaaatttc accgcggttc gaggttgtgg
     1381 cgaccgagga cgccgaggtg ttcactgctg agaacttgcg ccgcttcggc gctgtgatgt
     1441 tcttcaccac cggtgaattg ccgatgaacg aagcccagaa acaagccttt atcaacttcg
     1501 ttagggacgg aggcgggttt ttgggcgttc attcggcgac cgacactttt tatcggtggc
     1561 cggattacgg aaaactgatc gggggctatt tcgatcagca tccatggcac cagaccgtcc
     1621 gcatcgatgt tgccgatcgg tccgacccgc tggttgcttt cattggtccg tcgatggtgc
     1681 tctctgacga gatctaccag atccgcgact tcgatgtcgg cagctcccac gtgctgctgc
     1741 gcctcgaccc gacctcggtc gatctcaccc gcaataatgt gcaccgccat ccttacggct
     1801 ggccgctggc ctggacccgc accttcggca gcggacgcgt gttctacacc gcccttggcc
     1861 atgaggaggc agtgtggcgc gattcacgat accaaacgct gctgcgcaac gccgtgcagt
     1921 gggccatcgg cggggcccgg taagccctcc gagcatcctc cggacgcttg tgccccgcag
     1981 ccattgcgcc gacaatgccg aaacatcaca agtcgccgga ggagagcccc aatgcacgac
     2041 gttacgagcg atcattggca cgagccggaa ggcatgaaga acgcgggtta cggcgcctgg
     2101 cggcgaccca atacgcctta tgatgactac atggaggcgc aaggcattcc gatctttcgc
     2161 ggcatcgggg tgcgacgcgt gcaggacatg gcgctcaagc gctgggaccg gatgggtggc
     2221 aacggcacct tcatccaact ctacggcact gagggcaaat ggggctgcta cgtggtcgag
     2281 gtgccgggcg ccggcgcgct caatccggag cgccacatgt atgaggagat catggtggtg
     2341 gtggaggggc gcggcaccac cgaggtgtgg accgacgacc agaggaagcc ccatacgttc
     2401 gagtgggggc gcggctccat gttcgcgatt ccgctcaact gctggcaccg catcatcaac
     2461 gcggcatcaa gtccggcgct catcctggta gcgtccacgg ctcccaacgt gatgaacgtc
     2521 tttcgcgata gcgactggat cttcaattgc ccggtcacct tcccgtcccg gttcgacggc
     2581 agccaggatt ttttcaagcc caaggacgag atcgttccg
//
LOCUS       DATILV010000785        11372 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_186682, whole genome shotgun sequence.
ACCESSION   DATILV010000785 DATILV010000000
VERSION     DATILV010000785.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 11372)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11372)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11372
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186682"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..141)
                     /locus_tag="VLJ17_18940"
     CDS             complement(<1..141)
                     /locus_tag="VLJ17_18940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25095.1"
                     /translation="MSSNIKPKTPAKEAPNEPFKRAVTGCLRAIARKPELEVSFAAER
                     PGM"
     gene            complement(143..1123)
                     /gene="cobS"
                     /locus_tag="VLJ17_18945"
     CDS             complement(143..1123)
                     /gene="cobS"
                     /locus_tag="VLJ17_18945"
                     /EC_number="6.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051116 - cobaltochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobaltochelatase subunit CobS"
                     /protein_id="HSV25096.1"
                     /translation="MTTDLAAPLPDIKVSVRQMFGFDSDMEVPAYAKPDEHVPDIDSD
                     YRFDRPTTLAILAGFARNRRVIVTGYHGTGKSTHIEQVAARLNWPCVRVNLDSHISRI
                     DLIGKDAIVIRDGQQVTEFRDGILPWAYQHNVALVFDEYDAGRPDVMFVIQRVLESSG
                     RLTLLDQSRVIKPHPAFRLFATANTVGLGDTSGLYHGTQQINQAQMDRWSIVTTLNYL
                     PHDNEVEIVLAKARHYRTDAGRDVVNKMVRVADLTRNSFMNGDISTVMSPRTVITWAE
                     NADIFKDVGFAFRLTFLNKCDELERPLVAEFYQRCFGQELPEASVNVALS"
     gene            1292..1438
                     /locus_tag="VLJ17_18950"
     CDS             1292..1438
                     /locus_tag="VLJ17_18950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25097.1"
                     /translation="MSRINLTESHKGAEAVDDGLSQNLWRRLRFSDTPGDPVIRLKTN
                     KIFT"
     gene            complement(1513..2145)
                     /locus_tag="VLJ17_18955"
     CDS             complement(1513..2145)
                     /locus_tag="VLJ17_18955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HSV25098.1"
                     /translation="MKFDSPLYDRIRVRPGEDRRLRAERPCCDWPNCTEQASHRAPKG
                     RNREREYWRFCLQHVREYNQSYNFFAGMSDDAVARFQKDALTGHLPTWRMGMVGGKGR
                     AKGKVGRLFDEGFGSADPFDILREFGGPRLGAAQSRAEAERRTLRNAERKALYALGLE
                     DGAVGRDVKARFKELVKRHHPDANGGDRASEDKLREIIEAYNYLKKTGFC"
     gene            2278..2550
                     /locus_tag="VLJ17_18960"
     CDS             2278..2550
                     /locus_tag="VLJ17_18960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006613642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family protein"
                     /protein_id="HSV25099.1"
                     /translation="MGVQEIILRKLTETFAPLSLKVLDESHQHEGHVGHRPNGETHFR
                     VYIVAEAFRGKSRLARHRMINETLADELKSGVHALAIHAAAPDEAL"
     gene            complement(2603..3376)
                     /locus_tag="VLJ17_18965"
     CDS             complement(2603..3376)
                     /locus_tag="VLJ17_18965"
                     /inference="COORDINATES: protein motif:HMM:NF014193.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SURF1 family protein"
                     /protein_id="HSV25100.1"
                     /translation="MAGVAASGSLRRGVLVPSLATAVALAVLILLGLWQLDRKAWKEG
                     LIAILEQRLSAAPVALPPPAEWPRLTAETDEFLRVVMTAEFLNDREALVYTGGSTLRE
                     ASGGPGYWIFTPARLAGGALIMVNRGFVPDGKQDPAARPEGQIVSPIKLVGVLRWPEK
                     PGPFTPAGDPARNIWFARESTAIAAAKAIGGAPFYVELESPEPPGGLPHTGRLRPNLP
                     NNHLGYALTWFGLAAVLLAVYGTWLFGSWRKRGIVGHGA"
     gene            complement(3376..3765)
                     /locus_tag="VLJ17_18970"
     CDS             complement(3376..3765)
                     /locus_tag="VLJ17_18970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF983 domain-containing protein"
                     /protein_id="HSV25101.1"
                     /translation="MSPQGSRPPVSPLFAGLMCRCPRCGKGKLFRGFLGLPTHCEVCG
                     LDYAFIDAGDGPAVFIILLSGFIVVGSALIVEALYQPPFWLHAVLWGPLILLTTLGPL
                     RPMKGLLIALQYHHKAAEGRLERRPGA"
     gene            complement(3862..4716)
                     /locus_tag="VLJ17_18975"
     CDS             complement(3862..4716)
                     /locus_tag="VLJ17_18975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HSV25102.1"
                     /translation="MADAHAKPHHDYHLVDPSPWPAIGSVSAFLMAVGAITWMHHSFA
                     AAPYLFGVGTIGVLYTMLSWWRDVVDEAEHQGHHTRVVQLSHRYGMILFITSEVMFFV
                     AWFWAYFSTALFPTDVHQVMRADFIGHVWPPKGIETFNPWHLPLLNTLILLTSGTTVT
                     WAHHGLLHDDRDSLKWGLVLTIALGISFTCVQAYEYMHAPFHYAGHIYGATFFMATGF
                     HGFHVIIGSIFLIVCLIRALAGQFTPKQHIGFEFAAWYWHFVDVVWLFLFACIYVWGA
                     GASHAAGH"
     gene            complement(4779..5432)
                     /locus_tag="VLJ17_18980"
     CDS             complement(4779..5432)
                     /locus_tag="VLJ17_18980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HSV25103.1"
                     /translation="MDTRQQTTDNGECVVPDDVRPASCLLRPAKSNILVATACGVFVA
                     FMVGVAYAAVPLYSWFCKTTGFGGIPQIAATAPVQISDRKIVVRFDGNVSAGLPWRFE
                     PERSSIEVRLGEVVTVYYTVTNLSERETAGQAAYNVTPPTVGGYFAKINCFCFTEQRL
                     AAGETREMAVAFYVDPALTGDSDQDDLNTITLSYTFFPLRPPRAGVADGAPQTGRKI"
     gene            complement(5472..5639)
                     /locus_tag="VLJ17_18985"
     CDS             complement(5472..5639)
                     /locus_tag="VLJ17_18985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25104.1"
                     /translation="MDDKDSEQGIVLTEEQKRRRRARSIAIALALGALVLLFYVVTIV
                     KLGPGVLRRPL"
     gene            complement(5656..6600)
                     /locus_tag="VLJ17_18990"
     CDS             complement(5656..6600)
                     /locus_tag="VLJ17_18990"
                     /EC_number="2.5.1.141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020176678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008495 - protoheme IX farnesyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0048034 - heme O biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme o synthase"
                     /protein_id="HSV25105.1"
                     /translation="MTHIAADHSPKTTVFAISEASVGDYVALMKPRVMSLVVFTAFVG
                     LMVAPGHLHPVLGFAALLCIAIGAGAAGALNMWFDADVDAKMSRTARRPIPAGRVLPG
                     EALAFGMTLAFGSVAVLGLVANWPAAALLALTIFFYVAIYTMRLKRATPQNIVIGGAA
                     GAFPPVIGWVAAVGTIGLESVLLFLIIFFWTPPHFWALSLWRADDYARAGIPMLPVVA
                     GHAETRRQILLYSMVLAPVGASPWLFGYSGLLYGVTAVMAGAAMIWLSLRIKTLGDAD
                     AGNRAAKRLFGASILYLFVLFAVLLIDDRLGAFGRGLL"
     gene            complement(6718..8331)
                     /gene="ctaD"
                     /locus_tag="VLJ17_18995"
     CDS             complement(6718..8331)
                     /gene="ctaD"
                     /locus_tag="VLJ17_18995"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008139909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit I"
                     /protein_id="HSV25106.1"
                     /translation="MDTQVTAHGTHDGDHGHPNGWRRFVYSTNHKDIGTMYLVFAIMA
                     GVIGGSMSILMRIELQNPGLQIFHDSQTFNVFTTAHGLIMIFFMVMPAMIGGFGNWIV
                     PLMIGAPDMAFPRMNNISFWLLPASFALLITSTFVEGASGSKGVGAGWTIYTPLSSIT
                     GHPGPAVDFAILSLHLAGASSITGAINFITTILNMRAPGMTLHKMPLFVWSILVTVFL
                     LLLAMPVLAGAITMLLTDRNFGTAFFDPNYGGDPLLFQHLFWFFGHPEVYILIVPGFG
                     MVSQIVATFSKKPVFGYLGMAYAMVAIGVIGFVVWAHHMYTVGMSSGAQAYFVAATMV
                     IAVPTGVKIFSWIATMWGGSIEFKTPMLWAIGFIFLFTIGGVTGVVLANAAIDRYLQE
                     TYYVVAHFHYVLSLGAVFTIFAGWYYWFPKITGYMYEDWIGRLHFWVTFVGVNMVFFP
                     QHFLGLAGMPRRYVDYPDAYHGWNMVSSYGSYISGIGVLIFFYGMVRAFIRKERAANN
                     PWGAGATTLEWTLPSPPPFHQFDVLPRIR"
     gene            complement(8389..9234)
                     /gene="coxB"
                     /locus_tag="VLJ17_19000"
     CDS             complement(8389..9234)
                     /gene="coxB"
                     /locus_tag="VLJ17_19000"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HSV25107.1"
                     /translation="MPVFFRTIVVAALAAALLLSAGVAFAGLGQPTPWQIGLQESGSP
                     VMDEVIWLHTLVLWIITGITVFVLSLLVVVIVKFNAKTNPTASRTTHNTLVEVLWTVI
                     PVVILIIIALPSFRILFVQLNTPPADLTIKATGVTWNWKYNYPDNGDFEFDSLMQPDK
                     DLKPGQPRLLTVDNELVVPVNKVVRVLVTGFDVIHAFAVPSFGIKIDAIPGRLNETWF
                     KATKEGWYYGQCSELCGKDHAFMPIAVRVVSEGEFATWVEAAKKKFASNGIPTNVATA
                     NLAAE"
     gene            9606..10217
                     /locus_tag="VLJ17_19005"
     CDS             9606..10217
                     /locus_tag="VLJ17_19005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018644973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion associated locus B family protein"
                     /protein_id="HSV25108.1"
                     /translation="MMAPRQSTAVLHKADANAPPASAEMGSRYRSTFVAAIVRCCRAL
                     GSFAAFLIAAAPSPAFTQGAVKSVHGDWQIRCETPPGAQNEQCALFQSVVAEDRANVG
                     ITVLVLKTADQKSRLMRVQAPLGVLLPAGLGLKIDNADVGRAGFVRCLPRGCYAEVVM
                     DDTLIGKLRTGQTATFFIFQTPEEGVGFPLGLKGFGEGYDKLP"
     gene            10247..11257
                     /locus_tag="VLJ17_19010"
     CDS             10247..11257
                     /locus_tag="VLJ17_19010"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV25109.1"
                     /translation="MNDGEGAPHRRSKSAALILAGIAVLAASVLVNAPLGAQTYPDRP
                     IKLIVPSGPGGPTDIAARLLSQILPKIGQPVVIDNRPGAGGLIAARIVATSAPDGYTL
                     LLGNTSVLAVLPAVSTNAGYDPNTHFSAVAKFSESYQILVVHPAAAVKTIRELIAHAK
                     ANPGKLNYSQTGAGGLPHLTGELFKRAAGVDIVGVPYKSGADSIIGLLGAQVDMTFES
                     ITVLLPLIREGRLRALAITSRTRTPLADDLPTMIEAGIPDYEVTTFNGIVAPAGTPEP
                     IVRRLNAIINEGLRMPEMQANIRTLGAVSNPVSAAEFGAFIVAEARKWSTVAKAANVH
                     ID"
BASE COUNT         2447 a         3514 c         3371 g         2040 t
ORIGIN      
        1 catcccgggc cgctcggccg cgaacgaaac ctcaagctcc ggcttgcgtg caatggcgcg
       61 caagcatcca gttaccgcac gcttgaacgg ctcgttcgga gcctccttgg ccggggtctt
      121 gggtttgatg ttcgaggaca tctcaactca gcgccacatt caccgacgcc tccggcaatt
      181 cctgaccaaa gcagcgctga tagaactctg ccacgagggg acgctcgagc tcgtcgcatt
      241 tgtttaggaa ggtcagccgg aacgcaaacc cgacatcctt gaagatgtcg gcgttctcag
      301 cccaagtgat gaccgtgcgc gggctcatca cagtcgagat gtctccgttc ataaatgaat
      361 tgcgggtgag gtcggcgact cgcaccatct tgttgacgac gtcgcgcccc gcatcggtgc
      421 gatagtgcct cgccttggcg agaacgatct cgacctcatt gtcgtgaggc agatagttca
      481 gggtggtaac gatcgaccac cggtccatct gcgcctggtt gatctgctgg gttccatgat
      541 aaagccctga agtgtcgccg agacccaccg tgttggccgt cgcgaacagc cggaatgcgg
      601 gatgcggctt gatgactcgg ctttgatcga gcaacgtcaa ccgacccgag gattccagca
      661 cgcgttgtat cacgaacatg acatcagggc ggccggcatc gtattcgtca aataccaacg
      721 cgacattgtg ctgatacgcc cacggcaaaa ttccatcacg aaactcggta acctgctgac
      781 catcgcggat cacgatcgcg tccttaccga tgaggtcgat acgactgata tggctgtcaa
      841 gattaacgcg cacacacggc cagttgagcc gcgccgctac ctgctcgata tgggttgatt
      901 ttcccgtacc gtggtatccg gtcacgatga cgcggcgatt tcgggcaaat ccggcgagga
      961 tcgcgagcgt ggtcgggcga tcgaaccgat aatcggaatc gatgtcgggt acgtgctcgt
     1021 ctggcttcgc atatgccggc acttccatgt cgctgtcgaa gccgaacatt tgccggacgg
     1081 ataccttgat gtccggcagt ggcgcggcaa gatcggttgt catcagtcct ccgtgcgtga
     1141 agccccagcg atccccgatg gacgcaaagg gatccgcggg ccgcagcaca cgcttggccc
     1201 ggtatgacgc ccaaatccac gacctgagaa tttcggcgcc tcgacacacg gcatcggcga
     1261 ggcgcagggc ggctcgcatc aggcagatcg catgtcgcgg atcaatttaa cagaaagcca
     1321 taagggggcg gaagccgttg atgacggctt gagccaaaac ttatggcgtc gtttgcggtt
     1381 cagcgacacg ccaggtgatc ctgtcatccg tctgaaaaca aacaaaattt ttacatgatg
     1441 cgaggccacg ccccggcacc tgggcagtcg atcgatggga ttgcagtggg cttgcaggcg
     1501 agcacggcta aatcagcaga accccgtctt cttaaggtaa ttataggcct cgatgatctc
     1561 gcgtagcttg tcttccgagg cacgatcgcc accattggca tcgggatgat gacgcttcac
     1621 caattccttg aatcgagcct tgacgtcgcg gccgaccgcg ccatcctcca gcccgagcgc
     1681 gtagagcgcc ttgcgttcgg cgttgcgcag ggtgcgccgt tccgcctcgg cgcgagattg
     1741 tgccgcgccc aggcgcggac caccaaactc ccgcaaaatg tcgaacggat ctgcagagcc
     1801 gaagccctcg tcaaacagtc ggccgacctt tcccttggcg cggcccttgc cgccgaccat
     1861 ccccatccgc caagtcggaa gatgtccggt cagcgcgtcc ttctgaaagc gcgcgaccgc
     1921 atcatcgctc atgccagcaa aaaaattata ggactgattg tattcacgga catgctggag
     1981 gcagaaccgc cagtattcgc gctcccgatt gcgacccttt ggcgcccggt ggctcgcctg
     2041 ctcggtgcaa ttgggccaat cacagcacgg ccgctccgcc cgcagccgac gatcctcgcc
     2101 tggcctcact cggatacgat catacagagg tgagtcgaac ttcattgcct attatgcgga
     2161 ggatttagga cgtcacgcaa gcttgacaga cacgatgaga cgtgccttgc ggcagcgtcg
     2221 agatactgtt tgatgggatc gtaaagccgc cgttaacctc cttagcatgg agtcctcatg
     2281 ggtgtgcaag aaatcatttt gcgcaagctg accgagacct tcgctccgct gagcttgaag
     2341 gtgcttgacg agtcccatca acatgaaggc catgtcggcc atcggccgaa tggagagaca
     2401 cattttaggg tctatattgt ggctgaggca tttcgaggca agagccgatt ggcccgccat
     2461 cgcatgatca atgagacgct cgccgacgaa ctaaagtccg gtgttcatgc acttgccata
     2521 catgcggcgg cgcccgatga ggcgttgtga atatctcaag cgtccgcgca taagcggcgg
     2581 cgcctgctcc ctgcgccgcc gcttatgcgc catgtccgac aattccacgt ttccgccagc
     2641 taccgaacag ccacgtcccg tagaccgcga gcaatacggc tgcaaggccg aaccaagtta
     2701 gggcgtaacc gaggtgattg ttcggcaggt tcggccgcaa gcgacctgta tggggcaggc
     2761 cgccgggcgg ttcggggctc tccaattcca catagaaggg agcgccgccg atggctttgg
     2821 cggccgctat agcggtggat tcacgggcaa accatatgtt gcgggccggg tcgccggccg
     2881 gcgtgaatgg tccgggcttc tccggccagc gcagaacgcc gaccagttta atcgggctta
     2941 caatctgccc ctccgggcga gccgcaggat cctgcttacc gtcgggcacg aagccacgat
     3001 tgaccatgat aagcgcgccc cccgcgaggc gcgctggggt gaatatccaa tagcctgggc
     3061 caccactcgc ctcgcgcagg gtcgagccac cggtgtagac cagggcttcg cggtcgttga
     3121 ggaactctgc cgtcattacg acccgaagga actcatccgt ctcagccgta agccgtggcc
     3181 attcggcggg cggtggcagg gcgacaggcg ctgccgacag ccgctgttcg aggattgcaa
     3241 tcagcccttc cttccaggcc ttgcgatcca gttgccacag ccccaacaaa atcaggacgg
     3301 cgagggccac cgcggtcgcc aagctcggca ccagcacgcc gcgacgcagg cttcccgacg
     3361 ccgcgacgcc cgccattatg cgccgggcct gcgttcaagc cgcccctcgg cggccttgtg
     3421 gtgatactgg agcgcaatca gcaggccctt catgggacgc agcggcccca gcgtcgtaag
     3481 caggatcagt gggccccaga gcacggcgtg gagccagaac ggcggttggt acagcgcctc
     3541 cacaatcaag gcgctgccga ccacaataaa tcccgacaac aagatgatga agaccgccgg
     3601 cccgtcgccg gcatcgatga aggcatagtc aagcccgcac acctcgcaat gtgtcggcag
     3661 gccgagaaag ccgcggaaca acttgccctt gccacagcgc gggcaacggc acatcagccc
     3721 tgcgaacagc ggcgataccg gcgggcgcga gccttggggt gacatgagag agccacttca
     3781 gatgacgaaa gtcggacgga cgcaggtcag ggatgaggtg ttctcccgac atcctccgac
     3841 ctgtgcaatt cgctatctgc ctcagtgtcc ggcagcgtgc gacgcacctg caccccacac
     3901 atatatgcag gcgaatagaa acaaccaaac cacatcgacg aagtgccaat accaagccgc
     3961 gaactcgaac ccgatgtgtt gcttgggcgt gaactggcca gccagggcgc ggatcaagca
     4021 cacaatcagg aagattgatc cgataataac gtggaaaccg tggaaaccgg tcgccatgaa
     4081 gaacgtcgcg ccgtagatgt ggcccgcata atggaacggc gcgtgcatgt attcgtaggc
     4141 ttgaacgcag gtaaacgaga taccaagcgc gatggtgagc acgagccccc atttgagact
     4201 atcgcgatca tcatgcagca acccgtgatg cgcccaggtc actgtggtac cagaggttaa
     4261 cagaatgagt gtgttaagga gcggcaggtg ccacggattg aaagtctcta ttcccttcgg
     4321 aggccacaca tggccaatga aatctgcccg catcacctgg tggacgtcgg tcggaaacaa
     4381 cgcagtcgag aaataggccc agaaccacgc cacaaagaac atcacctccg aagtgatgaa
     4441 caagatcatg ccgtagcgat gagacagctg caccacacgg gtgtgatgac cttgatgctc
     4501 ggcctcgtcg accacgtcgc gccaccatga cagcatggtg tagagcaccc cgatggtacc
     4561 gacgccaaaa agatatggag cggccgcgaa agagtgatgc atccacgtaa tcgcaccgac
     4621 cgccatgagg aaggccgaca ccgagccgat cgccggccaa gggctcggat cgaccaagtg
     4681 gtaatcgtga tgaggtttgg cgtgcgcgtc ggccatttcc ttctccgtct tgtgctcagg
     4741 cgcggcgccg gccaaggcgc ggagccccgt taacacccct agatttttcg ccccgtctgc
     4801 ggtgcgccgt ccgcaacgcc cgcccgcggc ggtcgcaacg gaaagaacgt ataagacagc
     4861 gtaatggtgt tgagatcgtc ttggtcggaa tccccggtca gagcgggatc cacataaaat
     4921 gcgaccgcca tctcacgcgt ctcgccggca gcaagccgct gctcggtaaa gcagaagcag
     4981 ttgatcttgg caaaatagcc gccgacggtg ggaggcgtca cgttgtaggc cgcctgtccg
     5041 gcagtctcgc gctccgacag gttggtcacc gtgtagtaga ctgtcacaac ctctccaagc
     5101 ctgacctcga tcgagctgcg ctccggctcg aaccgccatg gtaacccggc gctgacatta
     5161 ccgtcgaacc gcaccacgat cttgcggtcg gagatttgca ccggtgcggt ggcggcgatc
     5221 tgcggaatcc ccccgaagcc agtcgttttg cagaaccaac tgtagagcgg caccgccgca
     5281 taggccacgc cgaccatgaa cgccacgaac accccgcagg ccgtcgcgac aagaatgttg
     5341 gatttcgcag gacgcaggag gcaggacgca ggacggacgt cgtcggggac cacacattct
     5401 ccgttgtccg ttgtctgttg cctggtatcc atcacgctct gccgtctgtc atccgccatc
     5461 caacatccgt tctacagcgg ccgacgtaac acgccggggc cgagtttgac gatggtgacc
     5521 acgtagaaca gcaacaccag cgccccaagc gcgagcgcga tggcgattga tcgggcgcga
     5581 cggcggcgct tctgctcttc cgtgagcacg atgccctgtt cgctatcctt atcgtccatg
     5641 ctggcatctt gctcctcaca atagaccgcg accaaacgcg cccagccggt catcgatcag
     5701 gagtaccgca aacaagacga agagatagag gatggaagcg ccaaacagcc gcttcgcggc
     5761 acgattcccc gcgtccgcgt cacccagcgt cttgatccgc aaggagagcc agatcattgc
     5821 ggcgccggcc atgaccgcgg tgaccccgta aagaaggcca gaataaccga acaaccacgg
     5881 cgacgcgcca accggagcca gcaccatcga ataaagcaga atctgccgcc gcgtctcggc
     5941 atggccggcg accacaggca gcatcggaat tccggcgcgg gcgtagtcgt cggcgcgcca
     6001 cagcgacaac gcccagaagt gaggtggtgt ccagaagaat atgataagga acagcagtac
     6061 cgattccaat ccgattgtgc ccacggcggc gacccaaccg atcactggcg ggaacgcgcc
     6121 cgccgcaccg ccgataacga tattttgcgg cgtagcgcgt ttgagccgca tggtgtagat
     6181 cgccacgtag aagaagattg taagggcaag gagcgcggca gccggccagt tcgcgaccag
     6241 tcccaacaca gccaccgagc cgaacgccag agtcatgcca aaggcaagcg cctcgccggg
     6301 caaaacccgg ccggctggta tcggccgtcg cgcggtccgc gacatcttgg catcgacatc
     6361 tgcatcgaac cacatattga gcgcgccggc ggcaccggcc ccgatcgcga tgcacagcag
     6421 cgccgcaaag cccagtaccg gatgcaaatg gccgggggcc accataaggc cgacgaacgc
     6481 ggtaaacacc acgagcgaca tcacccgcgg tttcatcagc gcaacatagt cgccgaccga
     6541 agcttcgctg atggcgaaga ccgtggtctt ggggctgtga tcggcggcga tgtgcgtcat
     6601 gcgatatcta tgttagctcg gagtcggccg tttcatccca cttttttgtg ttccaactcc
     6661 ggctccggct cgatgcggcc atggccgcat cggcaagtgt gcggaaaagt cagtgcctca
     6721 cctaattcgc ggcagcacgt cgaactgatg gaacggcggc ggcgacggta gggtccactc
     6781 gagcgtggtc gcgcctgccc cccacggatt gttggctgcc ctttccttgc ggataaaggc
     6841 gcgcaccatc ccgtagaaga agatcagcac gccgatgccg gaaatatacg atccgtatga
     6901 cgacaccatg ttccagccgt ggtaggcgtc cggataatcg acgtagcgac gcggcatgcc
     6961 cgcgaggccg aggaagtgct gcggaaagaa caccatgttc acacccacga atgtgaccca
     7021 gaagtgcagc cttccgatcc agtcttcgta catgtagccg gtgatcttcg ggaaccagta
     7081 gtaccaccct gcgaagatcg tgaagacagc gccgagcgac agcacgtagt ggaagtgcgc
     7141 gaccacgtag taagtctctt gcaggtagcg gtcgatggcg gcattcgcca gcaccacacc
     7201 tgtgacgccc ccgatggtga acagaaagat gaacccgatc gcccacagca tgggcgtctt
     7261 gaactcgatg gagccgcccc acatggtggc gatccaggag aaaatcttca cgcctgtcgg
     7321 caccgcgatc accatggtgg cggcgacaaa ataggcttgg gcgccgctcg acatgccaac
     7381 cgtgtacatg tgatgggccc acaccacaaa gccgatcacg ccgatcgcca ccatcgcgta
     7441 ggccatgccg agataaccga acaccggctt cttgctgaac gtggcgacga tctgactcac
     7501 catgccgaag cccggtacga tcagaatgta gacctccgga tggccgaaga accagaaaag
     7561 gtgctggaat agcagcggat cgccgccgta gttgggatca aagaatgcgg taccgaaatt
     7621 gcgatcggtc aacagcatgg tgatggcgcc agccagtacc ggcatggcga gcagcagcag
     7681 aaacaccgtc acgaggatcg accacacaaa cagcggcatc ttatgcagcg tcatgcccgg
     7741 cgcccgcatg ttcaaaatcg tggtgatgaa gttgatggca ccggtaatcg aggaggcccc
     7801 cgcgaggtgg agtgatagga tggcgaaatc gacggctggt ccggggtgcc cggtgataga
     7861 cgatagtggc gtatagatcg tccacccggc cccgacgcct ttgcttccgg atgcaccttc
     7921 gacaaaggtc gaggttatca acagcgcgaa cgaggcaggc aatagccaaa acgagatgtt
     7981 gttcatccgc gggaaggcca tgtcgggggc gccgatcatc agcggcacga tccagttgcc
     8041 gaacccaccg atcatcgccg gcatgaccat aaagaagatc atgatcaggc cgtgcgcggt
     8101 ggtgaacaca ttgaaggtct gggaatcatg aaaaatctgc aggccggggt tctgcagctc
     8161 aattcgcatg agaatcgaca tcgagccgcc gatcacaccg gccatgatgg cgaacaccaa
     8221 atacatcgtt ccgatgtctt tgtgattggt cgaatacacg aaacgccgcc acccgttcgg
     8281 atggccatgg tcgccgtcgt gagttccgtg cgctgtcact tgggtatcca tctgtttcgt
     8341 ccttagggtt ttcgctgtcg ggcagccgtt gcggcccaat gcatgggcct actcggctgc
     8401 aaggttggcg gtcgcgacgt tggtcgggat gccgttcgaa gcgaacttct tcttggcagc
     8461 ctccacccag gtggcgaatt ccccctcgct aaccacccgg accgctatcg gcatgaaggc
     8521 gtggtctttg ccgcacagtt ccgagcactg accataatac cagccttcct tggtcgcctt
     8581 gaaccaagtt tcattcaggc gtcccggaat agcgtcgatt ttgatgccga aggaaggtac
     8641 cgcaaaggcg tggatcacgt cgaaacccgt caccagcacc cggaccacct tattaaccgg
     8701 gaccaccagc tcgttgtcga ccgtgagaag ccgtggctgg ccgggtttca ggtccttatc
     8761 gggttgcatc aaagaatcga actcgaaatc gccattgtcc ggatagttgt acttccaatt
     8821 ccaggtgacc ccggttgcct tgatggtgag gtccgccgga ggcgtgttga gctggacgaa
     8881 caggatgcgg aatgacggta gcgcgataat gatgaggatg accaccggga tgacggtcca
     8941 caacacctca accaacgtgt tgtgggtggt gcgcgacgcg gtcggattgg tcttggcgtt
     9001 gaacttcact attacgacca cgagcaatga cagaacgaac accgtaatac cggtgataat
     9061 ccacagcacc agggtgtgga gccagatcac ctcgtccatc acgggactgc ccgactcttg
     9121 caagccgatc tgccagggtg tgggctgccc tagccccgca aacgctacac ctgctgacag
     9181 caacagggcc gcggccagcg ccgcaacaac tatcgttcgg aagaagaccg gcatcgtcgt
     9241 ctcagctcct tggatggcgg ccgcgcgcgg ccaaccggca ccacgaactt cgcatgcaaa
     9301 gtgcgaaaat tggcgttcgg ctgcggtagc ggtcgcagcg ggcgaattcc tgctcgggga
     9361 catattgcag ccggaagggc ccaagccctt caaccacaat ttcaccgcac tcgcaatgcg
     9421 ctcgatggga cgattttgcc atcatcccgg tcgagctgcg tgcatgttat gccatgaaat
     9481 tatgcatggc cggcgacgtc cccgcgcttg acaaggcggt ccgccacgct acgcagaacc
     9541 cgcagagggg ttgtcgccgc gataccaatc gtccggtgtg ccaccggaga ccagggaatg
     9601 gtaccatgat ggctccacgc caaagcactg ccgtcttgca caaggcggat gcgaacgccc
     9661 cgccggcgag tgccgaaatg ggctccagat atcgttcgac gtttgttgcc gcaatcgtac
     9721 gctgttgtcg cgctctcgga agctttgctg cattcctcat cgcggcagcc ccctccccgg
     9781 cgttcaccca gggagcggtg aagtcggtgc atggcgattg gcagatccgg tgcgaaaccc
     9841 cgccgggcgc ccagaacgaa caatgcgccc tgttccaaag cgtcgttgcc gaggatcggg
     9901 ccaacgtcgg catcacggtt ctggtgctca aaaccgcaga ccaaaaatcg cgcctgatgc
     9961 gggttcaggc accgctcggt gtgctgctgc cagccggact cgggctcaag atcgacaatg
    10021 cggacgtagg ccgggcaggc ttcgtgcgct gcctgccgcg cggctgctac gccgaggtcg
    10081 tgatggacga cacgctgatc ggcaagctgc ggacagggca gaccgcgact ttctttattt
    10141 tccagacccc agaggaaggc gtcggcttcc cattgggcct caagggcttc ggcgagggct
    10201 acgataaatt gccgtgacat gccttgttcg gccttgggag agaccgatga acgatggcga
    10261 aggtgcaccg catcgacgca gcaagtcggc agccctcatt ctcgccggaa tcgccgttct
    10321 tgccgcgtct gtgttggtga acgctccgct gggcgcccag acctacccgg atcggcccat
    10381 taaacttatt gtgccgtccg ggccaggagg ccccaccgac atcgcggcgc ggttattgtc
    10441 acaaattctg cccaagatcg gccaaccggt ggtgatcgac aaccgaccgg gcgccggcgg
    10501 actgatcgca gcacgcattg ttgccacatc ggcacccgat ggttacacgc tcctgcttgg
    10561 caacaccagc gtgctcgcgg tccttcctgc ggtatcaaca aatgccggct atgatcccaa
    10621 cacacatttt tccgccgtcg ccaaattctc cgagagctat caaatcttgg tggtgcatcc
    10681 cgctgcggcg gtgaaaacca tccgcgagct gatcgcccac gccaaggcca atcctggtaa
    10741 acttaactat tcccagaccg gcgccggcgg cctgccgcac ctcaccgggg agctgttcaa
    10801 gcgggcagcc ggcgtcgaca tcgtcggcgt gccatacaag agcggggccg attccatcat
    10861 cggcctgctc ggcgcccagg tcgacatgac attcgagagc atcacagtcc tgctaccgtt
    10921 gatccgggaa ggccggctgc gggcgctcgc gatcaccagc cgcacccgca cgccgctcgc
    10981 cgacgatctg cccaccatga tcgaggccgg cattccggat tacgaggtga cgaccttcaa
    11041 tggcatcgta gcaccggccg gcaccccgga gccgatcgtc cggcgtctca acgcaatcat
    11101 caacgagggc ctgcgcatgc cagagatgca ggccaacatt cgcacgctcg gtgcagtctc
    11161 gaatccggtc tccgccgcgg agttcggcgc ctttatcgtg gccgaggccc gaaaatggtc
    11221 aacggtcgcc aaggcggcga acgtgcatat tgattgagat caagggcgtg gtccgccgca
    11281 agctgacggc gatagggggg cgacatggcg aggatgatat ttgcagccgc gacctcacat
    11341 acgcccatgc tgcttgcgtc ggacgagacc ct
//
LOCUS       DATILV010000786         8713 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3262268, whole genome shotgun sequence.
ACCESSION   DATILV010000786 DATILV010000000
VERSION     DATILV010000786.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8713
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3262268"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(358..1038)
                     /locus_tag="VLJ17_19015"
     CDS             complement(358..1038)
                     /locus_tag="VLJ17_19015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008143006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV25110.1"
                     /translation="MPEIIFTGSAGRIEGRYHPSKIKNAPIAIVLHPHPQFGGTMNHP
                     IIYQLYYAFAHRNFSVLRFNFRGVGRSQGSFDHGQGELADAASALDWAQSINPEARGC
                     WIAGFSFGAWIGMQLLMRRPEIEGFISIAPPANLYDFSFLAPCPSSGLIIHGDKDAVV
                     PHKDVTGLVDKLKTQKGIVIEQRVVAAANHFFDGKIDELMTSVMGYLDKRLEGGDVRP
                     EPRGRRTG"
     gene            1405..2577
                     /locus_tag="VLJ17_19020"
     CDS             1405..2577
                     /locus_tag="VLJ17_19020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008965895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase family protein"
                     /protein_id="HSV25111.1"
                     /translation="MTERIYLDWNATAPLRPEARAAVIAALDEVGNPSSVHREGRATR
                     RLVEQARERVAALVGAEPRNVVFTSGGTEANMMALAPALETAGKKYRFDQLMVSSVEH
                     ASVRGGGSFPARQVEQIPVTMDGVLDLPALERRLNELQSQGLQPPLVSIMAANNETGV
                     IQPIKAAAALVHTAGGLLHVDAVQMVGRVPFDINRSDVDLITVSAHKLGGPQGVGALI
                     RRSDDLHFAEPLLTGGGQERGARAGTENVAGIAGFGAAATVAAATMTVDGERIRSVRD
                     RLEARLAEGPTVIFGQKAKRLPNTSLFAAPGLRAETALINLDLDGFAVSTGSACSSGK
                     VAGSHVLDAMGVPDKLSAGAIRLSIGPSTSENEIDLFLKAWMKLLTGLSKGKRVAA"
     gene            2680..4206
                     /gene="sufB"
                     /locus_tag="VLJ17_19025"
     CDS             2680..4206
                     /gene="sufB"
                     /locus_tag="VLJ17_19025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HSV25112.1"
                     /translation="MPAVQETVEQVRLIDVDQYKYGFETLIESERAPKGLCEDTVRFI
                     SAKKNEPVWMLEWRLGAYRHWLTMREPKWARVDYPAIDYQSMYYYAAPKQKAAPKSLD
                     EIDPEILKTYEKLGIPLREQELLEGIVREPQGDAEANAEDGSPAAPARKVAVDAVFDS
                     VSVATTFKKELKKAGVIFMPISEAIHEHPDLVKAYLGTVVPVKDNFFATLNSAVFSDG
                     SFVYVPPGVRCPMELSTYFRINERNSGQFERTLIIADKGSYVSYLEGCTAPRRDENQL
                     HAAVVELIALDDAEIKYSTVQNWYPGDAEGRGGIFNFVTKRGDCRGRHSKISWTQVET
                     GSAITWKYPSCILRGDGSRGEFYSIAISNGRQQVDSGTKMIHLGRNTVSRIISKGIAA
                     GRSNNTYRGLVSAHRRAVGARNFTNCDSLLIGDHCGAHTVPYIESKNPAAVFEHEATT
                     SKISEEMLFYCMQRGLSQEDAVALVVNGFVRDVLQQLPMEFAVEAQKLISISLEGSVG
                     "
     gene            4248..5039
                     /gene="sufC"
                     /locus_tag="VLJ17_19030"
     CDS             4248..5039
                     /gene="sufC"
                     /locus_tag="VLJ17_19030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HSV25113.1"
                     /translation="MSNWTKKSQEVHVALLEIKNLAVKVDDRDILNGLDLVVNSGEVH
                     AIMGPNGSGKSTLAHVLSGKPGYEVTGGQVRFEGADLLKLAPDERAARGIFLAFQYPL
                     EIPGVATMTFLRTAVNAQRKTRGEPELSTPAFMKRVKEHAARLSIDFDMLRRPVNVGF
                     SGGEKKRNEILQMALLQPKLAVLDETDSGLDIDALKVVADGVNQLRSPDRGMIVITHY
                     QRLLNHIVPDVVHVLSRGRIVRTGDKELALELEAKGYTQYQDEAA"
     gene            5044..6375
                     /gene="sufD"
                     /locus_tag="VLJ17_19035"
     CDS             5044..6375
                     /gene="sufD"
                     /locus_tag="VLJ17_19035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HSV25114.1"
                     /translation="MAPEITPIKTAAEVGLAQAFTALRGRLADGAIAARREAAFRRFE
                     TQGLPHRHVEEWKYTDLRALMRDAKPLADAPDAAAKARAKSCRGMFAAVDARRIVFVD
                     GALVPELSDLAALERGLKISSLADALGRGSPNVATRLGTAGPAESDVAYALNTAFMGD
                     GAIVEVGAGAHIARPLHLVFVYGSQHAAAVFSRSLVVVEADAGLTLIESHEGPDGVDY
                     QINAALDLTVGERARFDRIKVNAEGNAALHLSTLSAAIATNAHVSDFTFLTGGHVVRN
                     QLFVQCAGAGATLGLNGASLLKGRQHVDTALLVDHAVGGCQSRELFKSVLDGASRGVF
                     QGKIIVRPGAQKTDARMMTRALLLSEQAEADNKPELEIFADDVQCGHGATSGSLDDNL
                     KFYLMARGIPERDAETLLIQSFVGEAIEMVAHEGVRDALMAATLNWLAERP"
     gene            6381..7622
                     /locus_tag="VLJ17_19040"
     CDS             6381..7622
                     /locus_tag="VLJ17_19040"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0031071 - cysteine desulfurase activity
                     [Evidence IEA];
                     GO_process: GO:0006534 - cysteine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HSV25115.1"
                     /translation="MHPTVTKGLYDVARVREDFPILATKVYGKSLIYLDNAASAQKPK
                     AVLDRIQRAYTSEYANVHRGLHYLANVATEAYEGAREKVRAYLNAARPEEIIFTRNAT
                     EAINLVAYTFARERLKPGDEIVLSIMEHHSNIVPWHFLRERQGAVIKWAPVDDEGNFL
                     LDEFEKLLTDRTRMVAVTHMSNALGTVVPVKEIVRIAHARGIPVLVDGAQGAVHLDVD
                     VTDIDCDFYAFTGHKLYGPSGVGVLYGKYAHLAAMPPFNGGGEMIREVFQDRITYGDP
                     PHKFEAGTPSIVPAIGLGAAIDYVNSIGRAAIRAHEKMLLSYATDRLREINSLKIIGT
                     AKDKGAIISFEMTGAHPHDVATVIDRAGVAVRAGTHCVMPLLARFGTTATCRASFALY
                     NTQEEVDGLVAALMKAQEFFT"
     gene            7619..8041
                     /locus_tag="VLJ17_19045"
     CDS             7619..8041
                     /locus_tag="VLJ17_19045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018184401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SUF system Fe-S cluster assembly protein"
                     /protein_id="HSV25116.1"
                     /translation="MKVELDHSAPIPAGRELAEQDRRAASLASTPNGALSSEEIGRLT
                     EEIVAALKSVYDPEIPADVYELGLIYKIDIGDDRAISIDMTLTTPNCPSAQELPSMVE
                     NAAASVPGVGPVTVNVVWDPPWEPSRMSDEARVVLNMW"
     gene            8097..8507
                     /locus_tag="VLJ17_19050"
     CDS             8097..8507
                     /locus_tag="VLJ17_19050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly accessory protein"
                     /protein_id="HSV25117.1"
                     /translation="MAAPGRTPRPRPQLMRLSEAAAGRIRDIIGKSERPIAGIRVGVQ
                     NGGCAGMSYTMEYAEGSDPRDEIVDDKGVRLFIDPKAVLFLLGTEMDYRIDKFSSGFV
                     FNNPNQTSACGCGESVAITPAKEEQEVGPASDAH"
BASE COUNT         1739 a         2550 c         2708 g         1716 t
ORIGIN      
        1 cattgcacga gcggatgatt acggatcttc cgccgcgttc taaacctgaa tgtcttctta
       61 ggatctcccg tcgcaacatg agtggtcgaa gcgagctact ttgtcacgat gcggtctgtc
      121 cgtttttcgg cacgttccgg cggcgcgggg cgatcagggg atgccgagat atgatcgcag
      181 tcagatgtaa agcggacacc cccgctgcga tactaccgca gggcagccgg ggcttttacg
      241 tccgggccta tcgtgctttg ttacctccgc acgcaccgga tatgctaacc gtctgaactc
      301 aggcaattga ccgtacaggg actttcaccc tgtcagactc tcagccttgt cggctgctca
      361 cccggtccgt cgcccgcgcg gctcaggccg cacgtcgccg ccttccagac gcttgtcaag
      421 gtaacccatc acagatgtca tcagctcatc aatcttgccg tcgaagaagt ggttcgcggc
      481 agcaacgacg cgttgctcaa tcacgatgcc tttctgggtc ttgagcttgt cgaccaagcc
      541 ggtgacatcc ttgtggggca ccacagcatc cttgtcgccg tgaatgatga gacccgaaga
      601 agggcagggg gccagaaacg agaagtcata gagattggcg ggcggcgcaa tcgagatgaa
      661 cccttcgatc tcaggtcggc gcatcagaag ctgcatgccg atccaggccc cgaacgagaa
      721 accggcgatc caacagccgc gcgcttccgg gttgatggat tgtgcccagt ccagtgccga
      781 ggctgcgtcc gcgagctcgc cctggccatg gtcgaacgag ccctggctac gtccgacacc
      841 gcggaaattg aaacgcaaca cggaaaaatt tcgatgcgcg aacgcataat agagttggta
      901 gatgatcggg tggttcatgg tgccgccgaa ctgtggatgg gggtgcagca cgatcgctat
      961 tggggcattc ttgattttgg acggatggta gcggccctct attcggccgg cggagccggt
     1021 gaaaatgatt tcaggcatgg ttacaacctc aattgcctca gtgcagcacg ctcgtttcgg
     1081 cggcgcgcgc gccggcgtgc gcttgacgcc cctggcgagc gcacctaact aaccagaacc
     1141 gctcgatttt atcggacacg ctcgacaaaa cgcagccggc ggcgcacagt gcgagctggc
     1201 atagcgcgta ttctcttgcc cgatcaggag gataaaaagc aagaacttcg tgcgctaacg
     1261 gcatcgcggc gaaataagcg gaatttatcg ggctgtagca atcttttgcc ctcccggctt
     1321 gattagccct ctccctcgct ctgtccgcag gaggggaggg gaacgaaaac ggtgcaggcg
     1381 ccattgtttt atcggagttg atccgtgact gagcgaatct atctggactg gaatgccact
     1441 gctccgctgc gcccagaagc ccgtgctgcc gtgatcgcgg cactcgacga ggtcggcaac
     1501 ccatcctcgg tgcatcgcga aggacgtgcc acgagacgcc ttgttgagca ggcgcgcgaa
     1561 cgggtggcgg cgctggtcgg ggcggagccc cgcaatgtcg ttttcacgtc gggcggaacc
     1621 gaggccaata tgatggcgct ggcgccggcg ctggagaccg caggtaagaa gtaccgcttc
     1681 gaccagttga tggtgtcctc ggtcgagcac gcctcggtgc gtggaggcgg cagtttcccg
     1741 gcccggcagg tcgagcaaat tcccgttacg atggatgggg tgctcgatct acctgctttg
     1801 gagcgacgcc tcaatgagtt gcagtcgcaa ggccttcaac cgccactcgt ctccatcatg
     1861 gcggccaaca acgagaccgg ggtcattcag ccgatcaagg cggcggctgc ccttgttcat
     1921 accgccggtg gcctgctgca cgtcgatgcc gtccagatgg ttgggcgtgt tcctttcgat
     1981 atcaacaggt cggatgtcga cctgatcacg gtttccgccc acaagctcgg cggaccgcag
     2041 ggggtcggtg cgctgatcag gcgctctgat gacttgcatt tcgcggagcc gttgttaacg
     2101 ggcggtggac aggaacgtgg cgcccgtgcc ggcaccgaga acgttgcggg aatcgccgga
     2161 ttcggcgcgg cggcgacggt tgccgccgca actatgacgg tggatggtga gcggatacgc
     2221 tctgtgcgcg atcgcctgga agcccgattg gccgagggcc ccacggtcat ttttggtcag
     2281 aaagcgaagc ggttgccaaa taccagtcta tttgctgcgc ccggcctgcg tgctgaaacc
     2341 gcgctcatta accttgacct tgatggtttt gccgtatcca cgggttctgc ctgctcgtcc
     2401 ggcaaagttg ccgggtccca tgtgctggac gccatgggag tgccggacaa gctaagtgcg
     2461 ggcgctatcc ggctaagcat cgggcccagc actagcgaaa atgaaattga tcttttcctt
     2521 aaggcttgga tgaagctcct aacggggcta tctaagggaa aacgtgttgc tgcctgactg
     2581 caacaagcta taggtgatcg ccggaaccgg gccgaaccga ccatagacga ccacatcgat
     2641 ccaacccgcg gtccttgaaa ccgcagtgga gggaatgaaa tgccggccgt gcaagagacc
     2701 gtcgagcagg tgcgcctgat cgacgttgac caatataagt acgggtttga gacgcttatt
     2761 gagtccgaga gagctcccaa ggggctttgc gaggacaccg tacgcttcat ctccgccaag
     2821 aagaacgagc ccgtctggat gctggaatgg cgtctcggcg cgtatcgcca ctggcttact
     2881 atgcgcgagc cgaaatgggc gcgggtcgac tatccggcga tcgattacca gagcatgtac
     2941 tattacgccg ctcccaagca gaaggcggcg ccgaaatcgc tcgacgagat cgaccccgaa
     3001 atcctcaaaa cctacgagaa gctcggcatt ccgctgcgcg agcaggagct gttggaaggc
     3061 attgtgcgcg agcctcaagg cgatgccgaa gcaaacgccg aggacggcag tccggcggct
     3121 ccggctcgca aggtcgcggt cgacgcggtg ttcgattcag tgtcggtcgc aaccacgttc
     3181 aagaaagagc taaagaaggc cggcgtcatc ttcatgccga tctcggaggc gattcacgaa
     3241 catccggatc tggtgaaggc gtatcttggc acggtggtgc cggtaaagga caacttcttc
     3301 gccacgctca actcggcggt gttctccgac ggctccttcg tctatgtgcc gccaggcgta
     3361 cgctgtccga tggaactatc gacttatttc cgtatcaacg aacgcaacag cggccagttc
     3421 gagcgcacac ttatcatcgc agacaagggc tcctacgtga gctatctgga aggctgtacc
     3481 gcgcctcggc gcgacgagaa ccagttgcat gctgcggtgg tcgaattgat cgcgctcgat
     3541 gacgccgaga tcaaatattc gacggtccag aattggtatc cgggcgacgc ggaaggacgc
     3601 ggcggcatct tcaacttcgt gaccaagcgg ggtgactgcc gcggccgcca ttccaagatt
     3661 tcctggaccc aagtagagac cggctcggcg atcacctgga aatacccgag ctgcatcttg
     3721 cgcggcgacg gttcacgcgg tgaattctat tcgatcgcaa tctccaacgg tcgccagcag
     3781 gtcgattccg gtaccaagat gatccatctt ggccgcaata cggtaagtcg gatcatctca
     3841 aagggcattg cggccgggcg ttccaacaac acctatcggg gtttggtgtc ggcacaccgc
     3901 cgcgcggtcg gtgcgcgcaa tttcaccaat tgcgattcgc tcctcatcgg cgatcactgc
     3961 ggtgcccata cggtgccata catcgaatcc aaaaatcctg cagcggtgtt cgagcacgaa
     4021 gcaacaacgt cgaaaatctc cgaggagatg ctgttctact gcatgcagcg cggcctttct
     4081 caggaggatg cggtggcgct ggtggtcaac ggattcgtgc gtgatgtgtt gcagcaactg
     4141 ccgatggagt ttgccgtcga ggcccagaag ctgatttcga tcagccttga gggtagcgtg
     4201 ggataagtgg cgcggtgctg tgatggcgga gatcatcgca cgtttcgatg tctaattgga
     4261 cgaagaagtc ccaagaggtt catgtggcac tgctggaaat caaaaacctt gcggtcaagg
     4321 tcgacgaccg cgacattttg aatggtctcg accttgtcgt gaacagcggc gaggtccatg
     4381 cgatcatggg tccgaacggc tccggaaaat cgacgctagc ccatgtgttg tcaggcaagc
     4441 caggttacga ggtgaccggc ggccaagtgc ggttcgaggg cgccgatctt cttaaactgg
     4501 cgcctgatga gcgcgcggcc cgcggcattt tcctcgcgtt ccaatatccg ctggaaattc
     4561 cgggcgttgc cacgatgacg ttcttgcgca ccgctgttaa tgcccagcgc aagacgcgcg
     4621 gcgagcctga gttatcgacg cccgcattca tgaagcgggt gaaggagcac gccgcgaggc
     4681 tttccatcga tttcgacatg ctgcggcgcc cggtgaacgt cggcttctcc ggcggcgaga
     4741 agaagcgcaa cgagattttg cagatggcgc tgttgcagcc caagcttgcg gtgctggacg
     4801 agaccgattc cggcctcgac atcgacgccc tcaaggtggt cgccgacggc gtcaaccagc
     4861 tgcgttcgcc ggaccgcggc atgatcgtca tcacgcatta tcagcggctt ctcaatcata
     4921 tcgtgcccga tgttgtacac gtgttgtcgc gggggcgcat cgtgcgtacc ggcgataaag
     4981 agcttgcgct ggagctcgaa gccaagggtt atacgcaata ccaggatgag gcggcgtagc
     5041 gccatggcgc ccgagatcac ccccatcaaa acggcggccg aggtcggcct cgcccaagct
     5101 ttcacggcgc tgcggggcag gctggcggat ggcgcaatcg cagcgcgccg ggaggcggcg
     5161 ttccgacgtt ttgagacgca ggggttgcct caccgccatg tggaggagtg gaaatacacc
     5221 gatctgcgcg cgctgatgcg cgacgccaag ccgctcgcag acgcgccgga tgctgccgcc
     5281 aaggcgcggg cgaaatcgtg ccgcggcatg tttgccgccg tcgatgcccg gcgcatcgtg
     5341 ttcgttgacg gcgccctggt gccggaactg tccgatctcg ccgcgctcga gcggggactg
     5401 aaaatctcct cgctcgcgga tgccctcgga cgtggctcgc ctaatgttgc aacgcgactc
     5461 ggcaccgccg gtcctgccga aagcgacgtg gcctatgcgc tcaacaccgc cttcatgggc
     5521 gacggcgcca ttgtggaggt cggggccggc gcccacattg cgcggccgct gcatctcgtc
     5581 ttcgtctatg gctcacaaca tgccgcggcg gtgttttcgc gttccctggt cgtggtcgag
     5641 gcggacgccg gcctgaccct gattgagagc cacgaaggcc cggatggtgt tgactatcag
     5701 atcaacgcgg cacttgacct tacggtcggc gagcgtgcgc ggttcgaccg tatcaaggtc
     5761 aatgcagagg ggaacgcggc gcttcatttg tccactttga gcgccgccat agcgacaaat
     5821 gcgcacgtct ccgatttcac gttcctgacc ggcggtcacg tggtgcgcaa tcagctgttc
     5881 gtgcaatgcg caggtgccgg ggcgacgctt ggtcttaacg gagcgagtct gctcaagggc
     5941 cgacagcatg tggacaccgc gttgctggtc gatcacgcgg tgggcggctg ccaaagccgc
     6001 gaactattca aatcggtgct ggacggcgcc agccgagggg tgtttcaggg caagattatc
     6061 gtgcgcccgg gtgcccagaa gaccgatgcc cggatgatga cgcgggcgct cctgctttct
     6121 gagcaggccg aggctgacaa caagccggaa ctagagattt ttgccgatga cgtgcagtgc
     6181 gggcatggcg ccacgtcggg ttcacttgat gacaatctca agttctactt gatggcgcgg
     6241 ggcattccgg agcgggatgc cgagacgctt ctcattcaat ctttcgtcgg cgaggcgatc
     6301 gagatggttg cgcatgaagg cgtgcgtgat gcgctgatgg ccgcgacgct gaattggctt
     6361 gcggagcggc catgaacatc atgcacccca ccgtcaccaa gggtctatac gatgttgccc
     6421 gtgtgcgcga ggatttcccc atcctggcca cgaaggtcta tggcaagtcg ctgatctatc
     6481 tcgacaatgc cgcttcggcg caaaagccta aggctgtgct tgaccgcatc cagcgcgcct
     6541 atacgagcga atacgcgaac gtccatcgcg gcctgcatta tctcgccaat gtggcgaccg
     6601 aggcctatga gggcgcgcgc gaaaaggtcc gcgcctatct caatgcggca cggccagaag
     6661 agatcatttt cacccgcaac gccaccgaag ccatcaatct cgtggcctac acattcgcgc
     6721 gcgagcgcct caagccgggt gacgagatcg tgctttccat catggagcac cactccaaca
     6781 tcgtgccgtg gcattttctg cgcgaacgac agggcgccgt gatcaagtgg gcgcccgttg
     6841 acgacgaggg caatttcctc ctcgacgaat tcgagaaact gctgaccgat cgcaccagaa
     6901 tggtggcggt cacccacatg tcaaacgcgc tcggcaccgt ggttccggtc aaggaaatcg
     6961 tacgcatcgc ccacgcacgt ggcattccgg tactggtcga tggcgcccag ggggctgtcc
     7021 atctcgatgt cgacgtcacg gatatcgatt gcgacttcta tgcgttcacg ggccacaagc
     7081 tttacggccc ctctggggtt ggggtgctgt acggcaaata cgctcatctc gccgccatgc
     7141 cgccattcaa cggtggcggc gaaatgatcc gcgaggtgtt ccaggaccgc attacctatg
     7201 gcgacccgcc gcataagttc gaagccggca cgccgtcgat cgttccggcg atcggtctcg
     7261 gggcggccat cgattacgtc aattcaatcg gccgtgccgc gatccgagcc cacgaaaaaa
     7321 tgctgctttc gtatgccacc gaccgtctgc gcgagatcaa ttcgctgaaa atcatcggca
     7381 ccgcgaaaga taagggcgct atcatctcgt tcgagatgac gggtgcccat ccccatgacg
     7441 ttgccaccgt gatcgatcgc gccggcgtag cggttcgcgc cggcacccac tgtgtgatgc
     7501 cgttgctggc gcgatttggc acgactgcga cctgccgcgc ctcattcgcg ctctataaca
     7561 cccaagaaga ggtcgatgga cttgtggccg ccctgatgaa agcgcaggaa tttttcacat
     7621 gaaagttgag ttagaccaca gcgcgccaat ccctgcaggc cgcgaattgg cggagcaaga
     7681 tcgcagggcg gcttcgctcg cgtcgacgcc caatggcgcc ttgtcttccg aagaaatcgg
     7741 tcggctcact gaggagatcg tggctgcact caagtcggtc tatgatccgg aaattccggc
     7801 cgatgtctat gaacttggcc tgatctacaa gatcgatatc ggcgacgatc gcgccatatc
     7861 gatcgacatg acattgacca ctcccaactg cccgtccgcg caggaactcc caagcatggt
     7921 ggaaaatgcg gcggcgagcg tgcccggtgt cgggcccgta accgtcaatg tggtatggga
     7981 tccgccctgg gaacctagtc ggatgtccga cgaagcgagg gtggtattga acatgtggtg
     8041 agacatttcc attttaagtt cgcgcttcgg cgcgacgggc cgtaaaggag agcaccatgg
     8101 ccgcccccgg gcgaacgcca cgaccgcgac ctcagctgat gcgactgtcc gaggccgccg
     8161 ccggacgtat cagggatatc atcggcaaat cggagcggcc gattgccggc atacgggtgg
     8221 gcgtccagaa tggcggctgc gccggcatgt cgtacacaat ggaatacgcc gagggttccg
     8281 atccacggga cgagatcgtc gacgacaagg gcgtgcgtct cttcatcgat ccgaaggcgg
     8341 tactgttcct cctgggcacc gaaatggact atcgaatcga caaattttcc tccggatttg
     8401 tcttcaataa tccgaaccag acctcagctt gcggatgcgg ggaatcggtc gcaattacac
     8461 cggcgaagga agagcaggaa gtggggccgg cctcagatgc gcactgagcg ctgattatgc
     8521 caaccggtta aggcaacggt tgggcacgct tcgctttggc cacccacggc tcaacgattg
     8581 agtgatctac cttctgcgga gttgggtgat gagcgccctc gcctgggcag tggtggccga
     8641 aagcgcctta aggcgtgcgt gatctccaca ggcaaaagcc gcaacgatcg gcaggacggt
     8701 atcgaggctg tcg
//
LOCUS       DATILV010000787         3039 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4532793, whole genome shotgun sequence.
ACCESSION   DATILV010000787 DATILV010000000
VERSION     DATILV010000787.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3039
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4532793"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            221..784
                     /gene="efp"
                     /locus_tag="VLJ17_19055"
     CDS             221..784
                     /gene="efp"
                     /locus_tag="VLJ17_19055"
                     /inference="COORDINATES: protein motif:HMM:NF001810.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HSV25118.1"
                     /translation="MAIPATQIRRGMVILFEGQLCKVVDFRHHTPGNLRAMVQTKLRN
                     IRTGSSFDHRFRSADTVDKAALEQHDMEYLYSDGSHHHFMNTVSYEQVALSGEDLGDA
                     AQWLAPGLKLQVEFYEGLPIGIELPPSLELTVTQTEPTMKGATVSNVNKPATLENGVT
                     IQVPPFINEGDRLRVDPTEGRYIERAK"
     gene            878..2236
                     /locus_tag="VLJ17_19060"
     CDS             878..2236
                     /locus_tag="VLJ17_19060"
                     /EC_number="2.4.99.12"
                     /EC_number="2.4.99.13"
                     /inference="COORDINATES: protein motif:HMM:NF016311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /protein_id="HSV25119.1"
                     /translation="MYLLYSLLLTVGFLALLPWFAIDAFRTRKYITGLRQRLGRLPAI
                     GLDDRPRIWLHCVSVGETEAARPLVRALLERFPSYQLVISTTTVTGQRIAREAFGGDA
                     AAIFYFPIDWAWTVRRVLRTLQPAAVLIMETELWPHLLRECQRRTIPVALINGRISAT
                     SFGRYKLIRFFIRGLLNHLSIALMQSEQDAARIRELGIPNERVLMPGNLKFDSAESSI
                     EDATTENLRQRFGFDGTTRLIVAASTHAPEEQVVIDAFKQIRNSQTSYRARLLIAPRH
                     PERFGEVASLLQGSGFTWSRRSAMSQVEDTSCEVVLLDTIGELRAAYRLVDVAFVGGS
                     IAPHGGHNILEPAARGVCVITGAHMHNFAAIAKAMLDEEAIVQLPNVSASAALAELAS
                     ALNALLSDDSLRRGIGQRALMVCDQNRGATEQTLQAIACLLETPAAASIPFPAICVTA
                     AK"
     gene            2252..>3039
                     /gene="lpxK"
                     /locus_tag="VLJ17_19065"
     CDS             2252..>3039
                     /gene="lpxK"
                     /locus_tag="VLJ17_19065"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: protein motif:HMM:NF014645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HSV25120.1"
                     /translation="MNSAAALALTPLGRLYGVAMKARRALYSSGRFRVHELGVPVISV
                     GNLTTGGTGKTPLVEWFTRELAQSGQRVCILTRGYGRRSAGTRVVVSDGTEIITDVAQ
                     AGDEPLLLAERLRGLAAVISDADRVSAARWALENFQSEVFVLDDGFQHLRVARNLNIL
                     TIDATNPWGNGKLLPAGILRESPAEVTRADCIVITRADDSKPTEELRREIAAPRAGRH
                     IFCSRMGLSGMRPVHGKRDQTSVAGEEIKESNIAAFCALGNPES"
BASE COUNT          646 a          870 c          848 g          675 t
ORIGIN      
        1 aggtgggctc ctcctgagag cgagcaagca gcgccgggtg tgatcttaag aatgcattca
       61 aagcgggctt gctcgctctg ttttgttttt cgaataccgc tgaattaggc cgctggacaa
      121 tcactcgttc ctgccgctag actacgtcgt ttgtaacaag tgccgtgaac cttatctatc
      181 gccgcacgac tagaaaccaa cagaaagacc caagaacgta atggcaattc cagcaaccca
      241 aatcaggcga ggcatggtga ttctttttga aggccagctc tgcaaagttg tcgactttcg
      301 acatcacacg cccggcaacc tgcgcgctat ggtgcaaacc aagctgcgca atattcgcac
      361 cggctcgtct ttcgatcatc gttttcgctc ggcggatacg gtggacaaag ctgcgctcga
      421 gcagcatgac atggaatatc tctattcgga cggctcgcac catcacttca tgaacaccgt
      481 gtcgtatgaa caggtggccc tgagtgggga agacctcggc gacgcagcgc aatggctggc
      541 gcccgggctc aagctgcaag tagagtttta cgagggcttg ccgatcggca ttgaattgcc
      601 gccgtcgctt gaactaacgg ttacgcagac cgagcccacc atgaaaggtg cgacagtgtc
      661 caacgtcaat aaaccggcga ctctggaaaa cggcgtcacc attcaagtac cgcccttcat
      721 caacgaaggt gatcgtctgc gcgttgatcc gacggaagga cgttacatcg agcgcgccaa
      781 gtaaagtcgc accggcgcga agattagaat tgagacgacc ggccccggaa ctcagttcct
      841 gtaaacaaac catcacagac tgaggtctgt gccaactatg tacttgcttt acagcctgct
      901 tttgacggtt ggctttctcg cgctgctgcc gtggtttgca atcgacgcct tccgcactcg
      961 caaatacatc accggtcttc gtcaacggct cggccgctta cctgcaatcg gtttggacga
     1021 tcgacctcgg atctggttgc attgcgtttc cgtcggcgaa actgaggccg cacgccccct
     1081 ggttcgggca ctgcttgaaa gatttccttc ctatcagctg gtaatttcta ccacgactgt
     1141 gactggtcag cgcatcgcgc gggaggcgtt cggaggtgat gccgcggcta tcttttactt
     1201 tccgattgac tgggcctgga cggtccggcg agtgctgcgc accctgcaac cggcggccgt
     1261 cctaatcatg gaaaccgagt tatggccgca tttgctccgt gaatgtcaga ggcgcacaat
     1321 tcccgtcgcc ctgattaacg gtcgtatctc agcgacttcg tttggccgtt acaagttaat
     1381 ccgttttttc attcgcggct tactgaacca tctttcgatt gcgctgatgc aatctgagca
     1441 ggacgccgcg cgcatacgcg agttgggaat cccgaacgag cgtgttctga tgccgggaaa
     1501 cctcaagttt gatagcgccg aaagctcgat tgaggatgcc accaccgaaa acctgcgcca
     1561 gcgtttcggg ttcgatggaa ctacgcgtct aattgtcgcc gccagcacgc atgctccgga
     1621 agaacaagta gtcatcgacg cgttcaaaca aatcaggaat tctcaaacaa gctaccgggc
     1681 acgtcttttg atcgctcccc ggcatccgga acgatttggt gaagtcgctt cgctcctgca
     1741 aggttccggt tttacctggt cgcgcaggtc tgcgatgtcg caagtcgagg atacaagttg
     1801 cgaagtggtc ttgctcgata ccatcggtga attgcgggcc gcgtatcgcc tggtcgacgt
     1861 tgcttttgtc ggcggcagta ttgcgcccca tggcggccac aacattctgg agcccgccgc
     1921 tcgaggcgtc tgtgtcatca ctggcgcgca catgcacaat ttcgcagcca tagcgaaagc
     1981 aatgctggat gaggaggcga ttgttcagtt accgaatgtt tcagcttccg cagcactcgc
     2041 ggaacttgcc agcgctctta atgcactctt gtctgacgac tcgttgagac gaggcatcgg
     2101 ccaaagagct ctgatggtct gcgatcaaaa tcgcggcgcg accgagcaga ctcttcaggc
     2161 aattgcctgc ctgctcgaaa cgcccgctgc cgcgtcgatt cccttcccgg cgatctgcgt
     2221 cactgcagcc aaatgacagt cgtaggatca aatgaatagc gccgcagcac tagcgcttac
     2281 accgctgggc cgcttatatg gcgtggcgat gaaggcgcgt cgcgcactct atagctccgg
     2341 ccgatttcgc gtgcatgaac tgggcgtgcc cgtgattagt gtcggcaatc tgaccaccgg
     2401 cggcaccgga aagactcctc tggttgaatg gttcacacgt gagttagcgc aaagcggcca
     2461 acgagtctgc attctgacgc gcggttatgg ccgccgcagc gccggcactc gcgtcgtcgt
     2521 ttcggacgga actgaaatca ttactgacgt cgcccaagcg ggtgatgaac cattgctgct
     2581 ggcggagaga ttgagaggac tggccgcggt aattagcgat gccgatcgcg tatcagcagc
     2641 ccgttgggcc cttgagaact tccagagcga agtgtttgtc ctggacgacg gtttccagca
     2701 tctgcgcgtg gctcgcaacc tgaacattct cacgatcgac gccaccaatc catggggcaa
     2761 tggaaagctc ttgcccgccg gcatcttgcg tgaatcgcct gctgaggtca cgcgggccga
     2821 ttgcatcgtc ataacacgcg cggatgattc caaacccacc gaagagttgc ggcgcgagat
     2881 tgccgcgcca cgcgccggaa ggcacatctt ctgttcgcgc atgggattga gtggtatgcg
     2941 cccggttcac ggcaaacgcg accaaacttc ggttgccggc gaagagatca aggaatcaaa
     3001 catcgctgcg ttttgtgctc ttgggaaccc ggaatcatt
//
LOCUS       DATILV010000788         7973 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3769480, whole genome shotgun sequence.
ACCESSION   DATILV010000788 DATILV010000000
VERSION     DATILV010000788.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7973)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7973)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7973
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3769480"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..502
                     /locus_tag="VLJ17_19070"
     CDS             <1..502
                     /locus_tag="VLJ17_19070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF934 domain-containing protein"
                     /protein_id="HSV25121.1"
                     /translation="VSEDRYIKILDDAPLPDDVPVIVPAARFLADAEEILRRDGPVGV
                     VWPNNRKVAELAPYLDRLALIVLVFPTFKDGRAYSQARILRERYGFRGELRATGQILR
                     DQFLFQVRAGFDALEVAKASDVDAFAAALARYTVFYQTAGEGRISAARRRVARLIAPT
                     PGEAVL"
     gene            830..1663
                     /locus_tag="VLJ17_19075"
     CDS             830..1663
                     /locus_tag="VLJ17_19075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25122.1"
                     /translation="MFYRNAVTIIVACAALSVTICSARAHDESKYPDFSGQWIRVGGT
                     QWDPGKPSGLGQQAPLTPEYQAVYDASLAAQAAGGHGNDLRFTCRTSGMPRIMTAVYP
                     IEIIIQPNTTYVLSEYVMPRRIYTDGRTRPEEVERAFAGYSIGKWIDQDGDGRYDVLE
                     VETTHMKGPRDFDVDGLPLHKDNETVVKERIFLDKANPDLLHDEITTIDHALTHPWTV
                     MKSYRREKNPIWNEYDCNENNHHVAIGKENYFLSADGYLMPGRKGQQPPDTRYFDQAR
                     R"
     gene            1660..1897
                     /locus_tag="VLJ17_19080"
                     /pseudo
     CDS             1660..1897
                     /locus_tag="VLJ17_19080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018327749.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
     gene            1957..2355
                     /locus_tag="VLJ17_19085"
     CDS             1957..2355
                     /locus_tag="VLJ17_19085"
                     /inference="COORDINATES: protein motif:HMM:NF016701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HSV25123.1"
                     /translation="MERTATCVCGQLSVGCRGEPARVSLCHCLACQKRTGSTYGIAAF
                     FRREAVESKGRARRYMRSSDSGYEVTFHFCPDCGSTVFWEPHRKVDMIAVAVGAFADP
                     AFPPPSQAVYEEHRHPWIGIIHPSRPASPL"
     gene            complement(2321..2842)
                     /locus_tag="VLJ17_19090"
     CDS             complement(2321..2842)
                     /locus_tag="VLJ17_19090"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HSV25124.1"
                     /translation="MALRDILILPDRRLRSVSKPVAKIDANIRGLVGDMFETMYKAPG
                     IGLAAIQVGVPARVVVMDLSKREAEAEPKVFINPEIIWSSEEISTYEEGCLSIPDIHE
                     DVERPVRVKVKYLDLDGNPHEDDADGLFATCIQHEVDHLNGVLFIDHISKLKRDRIVK
                     KFTKAAKRAEKDG"
     gene            3094..4275
                     /gene="rmuC"
                     /locus_tag="VLJ17_19095"
     CDS             3094..4275
                     /gene="rmuC"
                     /locus_tag="VLJ17_19095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HSV25125.1"
                     /translation="MNQPVLTINGLDISLGAAAAAFAVAALALLLTIAIIAARAFRRH
                     ARENAGQKRQSEALETRIAELTRIQAETMGRLQALGEGLGGRQAELARVMAERLDAVS
                     TRLGHSMDEATQQTVQRLQSLHERIAVIDHAQKNLADLSGQVTSLRDVLGNKQTRGAF
                     GQARMETIVADGLPKGLFAFQHTLSNNTRPDCVIFLPDQRPLVIDAKFPLEAITAFRE
                     AKTEDGRQRAAQRLRQDVWKHISDIAGKYLLPGETQDMALMFVPSESIYAEIYDGFDD
                     LVQKAYRARVVMVSPSLLMLAIQVMQQILKDARMREAAHLIHAEVGRMMTDVGRLQER
                     VLKLQQHHGQAGEDMRQILISTEKIGARAGRIDQLDFGDNEGGPTIIPAPALLKLEAG
                     E"
     gene            4481..5842
                     /locus_tag="VLJ17_19100"
     CDS             4481..5842
                     /locus_tag="VLJ17_19100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011316227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV25126.1"
                     /translation="MTPIPQSVPAQKPSWSDTLSVYLRRRVLIVMFLGFSSGLPLALS
                     GSTLLYWMADVGVNLRTIGLFALVGTPYTFKFLWAPLVDALNVPWLSRRLGRRRGWLV
                     LTQLLLMAAIVFLGLCDPLANPWLVALGGLLVATASATQDIVIDAFRVDSLDESEQAT
                     GINAYVVAYRIGMVVSNAGTLFLVSGFEALGLRIHAAWNAGYVVTAALVLVGLATTLV
                     ALEPEKSAAAEELHRGKNAFHRLGTTVIGAFGDLFLREGVLVALVVLAFVVLFKFTDA
                     LAGVMTGPFAVELGFSRNEYAAIVKGVGLVAALAGGFAGSFVARAYPLAASLWIGGVI
                     QAAANFAFSWQAVVGRDAAWLTFAITAENFTSAVGTVIFVTYLSALCRNPMHTAMQYA
                     LLTALASFGRTALAAPGGRLAEATGWPAFFAICAIAALPSLALLAWLQRRGHFTTLTA
                     KAN"
     gene            complement(5871..6476)
                     /gene="recR"
                     /locus_tag="VLJ17_19105"
     CDS             complement(5871..6476)
                     /gene="recR"
                     /locus_tag="VLJ17_19105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination mediator RecR"
                     /protein_id="HSV25127.1"
                     /translation="MPTAVAGPEIERLIQLLARLPGLGPRSARRAALALIKRREQLMA
                     PLSAALQTAMEHISICTVCGNIDTSNPCTVCTDERRDASLIVVVEDVADLWALERAHA
                     VNARYHVLGGTLSPLDGIGPEDLSVDALVARAHAPEVKEIILALNATVDGQTTAHYIT
                     DLLGGANVKVTRLAHGVPVGGELDYLDEGTLAAAMRSRTPL"
     gene            complement(6482..6802)
                     /locus_tag="VLJ17_19110"
     CDS             complement(6482..6802)
                     /locus_tag="VLJ17_19110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HSV25128.1"
                     /translation="MVDFLGLMKQATELKTKMEAMQAELDHIEVEGTAGGGMVQVTMT
                     AKGELKSVRFDPSLMKPEEKEVAEDLVVAACADARRKAETLLQEKMKSLTGGLPLPPG
                     LKLF"
     gene            complement(6853..>7973)
                     /locus_tag="VLJ17_19115"
     CDS             complement(6853..>7973)
                     /locus_tag="VLJ17_19115"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF023591.4"
                     /note="catalyzes the DNA-template-directed extension of
                     the 3'-end of a DNA strand; the tau chain serves as a
                     scaffold to help in the dimerizaton of the alpha,epsilon
                     and theta core complex; the gamma chain seems to interact
                     with the delta and delta' subunits to transfer the beta
                     subunit on the DNA; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HSV25129.1"
                     /translation="AISHAAGSIRADDLRQMLGVADHSRIIELFDALMRGDIARALGE
                     LRDQYDSGADPQTALTELAAFTHFVTRVKIVPAVAEDRSLAEVERKRGREFAAGLSMR
                     VLSRTWQMLFKGIAEVKEAARPIAAAEMVLVRIAYAADLPAPEDVIRSLADGPHRPSA
                     RGRGNGAPTPVSPGSTPHGELAHTSGRQALAPSVMPPARDPVSRSVETPAAAQPPVFA
                     RFADLIAFVGEKRDLQLKTALERDVRLVRFEDGKLEIALEPSAAKALIGDLGRRLSAL
                     TGRRWMVVVSAEPGAPTVRSQVNARHEEFKRGVQVDPLVQNVLARFPGAEIVAVRQPD
                     PEPVLPVAAVDDGEPSEILPEGDESSFGARGRPDGDDP"
BASE COUNT         1426 a         2482 c         2475 g         1590 t
ORIGIN      
        1 ggtcagcgaa gatcgctaca tcaagattct cgatgacgcg ccgctgccgg acgatgtgcc
       61 ggtcatcgtg ccggcggcgc ggttcctcgc cgacgccgag gaaattttgc ggcgcgacgg
      121 gcccgtcggg gtggtatggc cgaacaaccg aaaagtggcg gaactcgcgc cctacctcga
      181 tcgcctcgcg ctgatcgtcc tggtattccc caccttcaaa gatggtcgcg cctacagcca
      241 ggcgcggata ttgcgtgaac gctatggctt ccgcggcgag ctgcgtgcca ccggccagat
      301 cctgcgcgat cagttcctgt tccaggtgcg tgccggcttt gacgcactcg aggtcgccaa
      361 ggcaagcgat gtcgacgcgt tcgcggcggc gctggcgcgt tacaccgtgt tctatcagac
      421 tgccggcgaa ggccgcatct cggcggcgcg gcggcgcgtg gcgcgcctga ttgcaccgac
      481 ccctggggag gcggtgcttt agccattttc gattcgtttg aacgtcatac gcgggcttca
      541 cccgcgtatc tatcctcttc gcaagcagcg tttttctctt gatggatcgc catacaggcg
      601 gtcgcgcaat aacgcgcgaa ccaacgaagg cgcctctttc tcaggtgagc aagatcgcgt
      661 aaccttccgg tatccctgcg gagcaaaagg gatagcgagg atgccgcgca ggtgttgcct
      721 cctcaaagag gatcgttttt tcgggcgaca cggaacgcgg atactacaac taaattacgg
      781 ctccccgcat tgctcctttt gcccgtagat cgatgacggg gaggacacga tgttttatcg
      841 aaatgcggtc actataatcg tcgcctgcgc agcactgtct gtgacgattt gcagcgcgcg
      901 agctcacgac gaatccaaat acccagactt ctcggggcag tggatcaggg tcggcggcac
      961 tcaatgggat cccggcaaac cttcgggttt gggacaacag gccccgctga cgccggagta
     1021 tcaggcggtt tatgatgcca gcctggcggc gcaagcggcg ggcggacacg gcaacgactt
     1081 gcggttcacc tgcagaacat caggcatgcc gcggatcatg accgctgtct atccgatcga
     1141 aatcatcatt caacccaaca ccacatacgt cttgtccgag tatgtcatgc cgcgccgcat
     1201 ttataccgat ggacgcaccc gaccggagga ggtcgaacgg gccttcgcgg gctattccat
     1261 cggtaaatgg atcgatcagg acggcgacgg tcgctatgac gtgctcgaag tcgagacgac
     1321 ccatatgaaa ggacctcgcg atttcgacgt ggacggcctt ccgctccata aggacaatga
     1381 gaccgtcgtc aaggagcgga ttttcctcga caaggccaat ccggatttac tgcatgacga
     1441 aattaccacg atcgaccatg cgctgacgca tccgtggacc gtgatgaaga gctaccgacg
     1501 cgaaaaaaat ccgatttgga acgagtatga ttgcaacgaa aacaaccatc atgtcgccat
     1561 cggcaaggag aactatttcc tcagcgcgga tggctatttg atgccgggac gtaagggcca
     1621 gcaaccaccg gatacgaggt acttcgatca ggcgcgcagg tgattcgccg gcgggccgcg
     1681 ataggccgcc gaaacctggt ccgccgcccg atcaccctcg agatgattga cgatgcgacc
     1741 accgatcggg acttgcgaat gccatccagc aatcacgtcg agaaactgca tagcaatctg
     1801 gtttcattcg atctgcgtca ataagcgatg gcgacttata ttgcggtgga cggcggccca
     1861 ggcgaagcga cggctcgacg atcatggtta cgtatgaggc gaaccatgtt gatggcggcg
     1921 gttatggatc cgggccgcca catcggaggt gtgggtatgg aacgaacggc aacgtgcgtc
     1981 tgcggccaac ttagcgttgg ctgcaggggc gagccagcca gagtttcact ttgccattgc
     2041 cttgcctgtc aaaaacgaac cggcagcact tatgggatcg ctgcgttctt ccggcgcgaa
     2101 gctgttgagt cgaagggacg cgcgcggcgc tacatgcggt cgtccgacag cggatacgag
     2161 gtcacgttcc atttttgccc tgactgcggc tccacggtct tttgggagcc acaccgcaaa
     2221 gtcgacatga tcgcggtcgc cgtgggcgca ttcgccgatc cggcgttccc gccgccatca
     2281 caagcagtct acgaggaaca ccgccatccg tggatcggca tcatccatcc ttctcggccc
     2341 gcttcgccgc tttagtgaac ttcttgacga tgcggtcgcg cttgagcttg gaaatgtgat
     2401 cgatgaacag caccccgttg agatggtcga cctcgtgctg aatacaggtg gcgaacaggc
     2461 cgtcggcgtc gtcttcgtgc gggttgccgt caagatcgag gtacttgact ttgactcgta
     2521 cgggccgttc gacgtcttcg tggatgtccg ggatcgacag gcagccctct tcgtatgtcg
     2581 atatttcttc ggatgaccag atgatttcgg ggttgatgaa gaccttgggc tctgcctcgg
     2641 cttcccgctt ggataaatcc atcacgacta cccgcgccgg tacgccgacc tggatggccg
     2701 cgagaccgat gccgggcgcc ttgtacatgg tctcaaacat gtcaccgacg agcccacgga
     2761 tgttggcgtc gattttggcg accggcttgg ataccgatcg cagccgtctg tcgggcaaaa
     2821 taaggatgtc gcgcagcgcc atggaagggc gatgtaaggg ctcactccgg tgtggtcaat
     2881 gcgaggatgc cagcgccgct accccagccg tcgctttgcc ggagcaggca gttgcatttg
     2941 gggcgcagct ctttcccctc cccacaaggg gagagggaag cgctgtgcca aatgcgatta
     3001 ccgtggctca cttccaacca ccacgccgac ctttcgccca tttcctgttc ctatttcgtt
     3061 cgttcggcgt gcgaatcggc tacaacaccc gccatgaatc agccggtctt gaccatcaac
     3121 gggctcgata tcagcctcgg cgcagcggcc gcggcgtttg cggtggcggc tctggcattg
     3181 ttgctgacga ttgcgatcat cgcagcgcgc gcattccggc ggcacgcgcg ggaaaatgcc
     3241 ggccagaaac ggcagagcga agccctggag actcgcatcg ccgagctcac ccgcatccag
     3301 gcggaaacca tgggccgcct ccaggcgcta ggtgaaggcc ttggcggtcg ccaggccgag
     3361 cttgcccgcg tgatggcgga acggctcgat gcggtctcga cccggctcgg gcattccatg
     3421 gacgaggcca ctcaacagac cgtccagcgg ctgcaaagcc tgcacgagcg catcgcggtc
     3481 atcgatcatg cccagaagaa cctcgctgat ctgtccggtc aggtcacctc gctgcgcgac
     3541 gtgcttggca acaagcagac gcgcggcgcg ttcggccagg ctcgcatgga gaccattgtg
     3601 gcggacggtt tgccgaaggg gttgttcgcg ttccagcata ccctgtcgaa caatacccgg
     3661 cccgactgtg tgatctttct gcccgaccag cgcccgctcg tcatcgatgc caagttcccg
     3721 ctggaggcta tcacggcgtt tcgagaggcc aagacggagg acggccgtca gcgcgccgcc
     3781 caacggctgc gtcaggatgt ctggaaacat atttccgaca tcgccggaaa atatctcctg
     3841 cccggcgaaa cccaagacat ggcgctgatg ttcgtgccgt cggaatcgat ctatgcagag
     3901 atttatgacg gattcgacga tctggtgcag aaggcctatc gggcccgagt ggtcatggtg
     3961 tcgccgtcgc tgttgatgct ggcgatccag gtgatgcaac agattttgaa ggatgcccgc
     4021 atgcgggaag ccgctcacct cattcatgcc gaagtcggcc gcatgatgac cgatgtgggc
     4081 cggttgcagg agcgcgtcct caaactgcag cagcatcatg ggcaggccgg ggaagatatg
     4141 cgccagatac tgatctccac cgagaagatc ggcgcgcgcg ccggtcgcat cgaccagctc
     4201 gatttcggcg acaacgaggg tggtcccacg attattccgg cgcctgcgct cttgaaactg
     4261 gaggcaggcg agtgatggtg ccacggcggt ctcttctgcc ctcccccgct tggggcggac
     4321 gaggggtgcc cctcttggtg tccctcttgg tgtccctctt gcgcgggggt cgagccgtgg
     4381 ggcgcgtaca tgtcaccacc tcccgacccc ccaccccaat tctcccctat aaggagggag
     4441 ggagaagaag ggatgccgaa cctgcatacg gacgcgaccg gtgacgccga ttccgcaatc
     4501 ggtgccggcc caaaagccga gttggtcgga cacgctgtcc gtctatctgc gccgtcgtgt
     4561 attgatcgtc atgtttctcg gtttttcctc cggcctgccg ctggcgctgt cgggctcgac
     4621 gctgttgtat tggatggccg atgtgggggt gaatctgcgt acaatcgggc tcttcgccct
     4681 tgttggcaca ccttacacct tcaagtttct ttgggcgccg cttgttgatg cgctgaacgt
     4741 gccgtggctg tcgcgtcgat tggggcggcg acgcgggtgg ctggtgctca cgcaactgct
     4801 gttgatggcg gcaatcgtct ttcttgggct gtgcgatccc ctggcgaatc cgtggttggt
     4861 ggcgctgggc gggctcttgg ttgccacagc ctctgcgacc caagacatcg tcatcgatgc
     4921 gttccgggtc gacagtctgg atgaaagcga acaggccacc ggcatcaatg cttatgtggt
     4981 cgcctatcgc atcggcatgg tggtttcgaa cgccggcaca ttgtttttgg tcagcggctt
     5041 tgaggcgctg ggcttgcgca tacatgcggc gtggaacgcc gggtatgttg tcactgccgc
     5101 gctcgtcctt gtcggcctcg caaccacgct ggttgcgctg gagcccgaaa aatcagcggc
     5161 tgccgaggaa ctgcatcgcg gcaagaacgc gttccaccgc ctggggacca ctgtgatcgg
     5221 cgcgttcggc gatctttttc tgagagaagg cgtgcttgtc gccctcgtcg tgctcgcctt
     5281 cgtggtgtta ttcaagttca cggacgcgct tgccggagtt atgaccgggc cgttcgcggt
     5341 cgaactcggg ttttcgcgga atgagtacgc cgcaatcgtc aaaggcgtcg gactggtcgc
     5401 agctctcgct ggcgggtttg cgggtagttt cgtggcacgt gcctatcccc tggccgccag
     5461 tttgtggatc ggaggcgtca tccaggctgc tgccaatttc gccttctctt ggcaggccgt
     5521 ggtcggccgc gacgctgctt ggttgacgtt tgcgatcacg gcggaaaact tcaccagcgc
     5581 cgtcggcacc gtgattttcg tcacctatct gtcggcgctg tgccgtaatc cgatgcacac
     5641 cgccatgcag tatgccctct tgaccgcgct cgcttcattc ggccggacgg ccctggcggc
     5701 gccggggggc cgattagccg aggcgactgg ctggccggcg ttcttcgcga tctgcgcgat
     5761 cgctgcgcta ccgagcctcg cgctgctcgc ttggctgcag cgtcgcgggc acttcacgac
     5821 actgaccgca aaggcgaact gaaccctaca cacacacggc gggaactggc tcacagcgga
     5881 gtccggctgc gcattgcggc cgcgagcgtg ccctcgtcga gataatcaag ttcgccgccg
     5941 accggcaccc catgggcaag ccgcgtcacc ttcacgttgg ctccgccaag caggtcggtg
     6001 atgtaatgcg cggtggtctg gccatcgacg gtcgcattga gtgccaggat gatctccttg
     6061 acttccggcg catgggcgcg cgccaccagc gcatcaacag aaaggtcttc cgggccgatg
     6121 ccgtcgagcg gcgacagagt gccgcccagt acgtggtacc gggcgttgac ggcatgggcg
     6181 cgttccagcg cccacaggtc agccacatcc tcgaccacca cgatcaagga cgcgtcgcgg
     6241 cgctcatcgg tgcaaactgt gcatggattg gacgtgtcga tgtttccgca caccgtgcag
     6301 atcgagatgt gttccatcgc ggtctgcagc gcggccgaca gcggcgccat caattgttcg
     6361 cgcctcttaa ttagcgctaa cgcggcgcgg cgcgccgagc gcggccccag acctggcagg
     6421 cgggccagta gctggatcag ccgctcgatt tcgggacctg cgacggcggt gggcattcag
     6481 ctcagaacaa cttcaacccc ggcggcaacg gcaggccgcc tgtcaggctc ttcatttttt
     6541 cctgcagcag ggtttcggcc ttgcgccggg catccgcaca cgcggcgacg acgaggtcct
     6601 cggcgacttc cttctcctcg ggcttcatca gggagggatc gaacctgacg ctcttgagtt
     6661 cgcctttggc agtcattgtc acctgcacca tgccgccgcc ggcagtgcct tcgacctcga
     6721 tgtggtcgag ctccgcctgc atggcctcca tcttggtttt gagctcggtg gcctgtttca
     6781 tcaatccgag aaaatccacc atgtctcgcc cttcatcgcg cctggtctgt gcacttcaca
     6841 aaatcgattg tttcacggat cgtcaccgtc cgggcggccg cgggcaccga acgacgactc
     6901 gtcaccttcc ggcagtattt ccgacggctc gccatcgtcg accgccgcga ccggcagcac
     6961 gggctctggg tccggctgcc gcaccgctac gatctccgcg cccggaaatc gtgccagtac
     7021 attctgtacc agaggatcga cctgcacgcc gcgcttgaat tcctcgtgtc gggcattgac
     7081 ttgtgatctg accgtcggcg caccgggctc cgccgacacg accaccatcc aacgtcgtcc
     7141 ggtgagcgct gagagccgac ggccgagatc gccgatcagc gccttggcgg cgcttggctc
     7201 cagcgcaatt tccaacttgc cgtcctcgaa ccgcaccaaa cgcacgtcac gttcaagcgc
     7261 ggtcttgagt tgcaggtcgc gcttctcgcc cacgaatgca atcagatcgg caaatcgcgc
     7321 gaacaccggc ggctgtgccg cggccggggt ctcgacgctg cggctgaccg gatcgcgggc
     7381 cggcggcatc acggatggcg cgagcgcctg ccgtcccgat gtgtgcgcca attcgccatg
     7441 aggggttgac ccaggcgaca ccggcgtagg tgcgccgttc ccgcgccccc gggccgaggg
     7501 acggtgcggc ccgtcagcaa gcgagcggat gacatcttcg ggagccggaa ggtcggccgc
     7561 ataggcgatc cgcaccagca ccatttcggc cgctgcgatc ggccgcgcgg cctccttcac
     7621 ttcggcgata cccttgaaca acatctgcca ggtccgtgac agcacccgca tggacaggcc
     7681 cgcggcgaac tcgcggccgc gcttacgttc gacctcggcc aacgagcgat cctccgcgac
     7741 agccggcacg attttcacgc gggtgacgaa atgcgtaaag gcagcaagct cggtgagcgc
     7801 ggtctgtgga tcggcgccgg aatcgtattg atcacgcaac tcgcccagcg cgcgggcaat
     7861 atcgccgcgc atcagcgcat cgaacagctc gatgatgcgg ctgtggtcgg ccaccccaag
     7921 catctggcgc aggtcatcgg cgcgtattga cccggccgcg tgggagatcg cct
//
LOCUS       DATILV010000789         3270 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4793491, whole genome shotgun sequence.
ACCESSION   DATILV010000789 DATILV010000000
VERSION     DATILV010000789.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3270
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4793491"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1738
                     /gene="uvrC"
                     /locus_tag="VLJ17_19120"
     CDS             <1..1738
                     /gene="uvrC"
                     /locus_tag="VLJ17_19120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HSV25130.1"
                     /translation="LDSRITRMIAATVSLEFVSTKTETEALLLEANLIKRLRPRFNVL
                     LRDDKSFPYILITSDHWAPQIFKHRGARTRPGHYYGPFASAGAVNRTINALERAFLLR
                     SCSDSYFEARTRPCLLHQIKRCSAPCTREIDFAGYTELVREANEFLSGRSQSVQKEMA
                     AEMDQASASLDFERAAIYRDRLSALSAIQSHQGINPRSLEEADVFAVHQAGGYSCVEV
                     FFFRTGQNWGNRAYFPKADRAIGPDEVLSAFLAQFYDDKPPPRCILVSHEFEERELLA
                     QALSTKSERKVEVSVPQRGERKELVQHAQANAREALARKLADTSSQQKLLGALTETFA
                     LPRAPRRIEVYDNSHISGSNAVGAMIVAGPEGFRKNQYRKFNIRSAELRPGDDYGMMR
                     EVLQRRFKRLLEESPRSAVAGMLAAVFKGDDEDQPWPDLVLIDGGQGQLKAAQETLSA
                     LGVTDVPLVAIAKGPDRDAGRETFFMPGRDPFKLPPRDPLLYFIERLRDEAHRFAVGS
                     HRVRRKKDIRESGLQEIPGIGPTRKRALLRHFGTVKAIERASLPDLAQVPGINAETAR
                     KIYEFFHDSAAH"
     gene            1752..2642
                     /locus_tag="VLJ17_19125"
     CDS             1752..2642
                     /locus_tag="VLJ17_19125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015886715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0018576 - catechol 1,2-dioxygenase
                     activity [Evidence IEA];
                     GO_process: GO:0009712 - catechol-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dioxygenase"
                     /protein_id="HSV25131.1"
                     /translation="MIIQRQEDVTKAVTEAFKNTQPPRVREILISMVEHLHAFARDVR
                     LTEEEFEKAVQYVVRLGQKTDDNHNEAVLMSGSLGFSTLICLLNNGNKGQTETTANLL
                     GPFWRMNSPRTENGASIVRSPTPGPALFVNCWVKDQKGKPIAGAEVDVWHSSPEGFYE
                     QQDPKQAPMNLRGKFLTDAQGQFGFRSVKPAGYPIPVDGPVGDLVRATGRHNYRPAHL
                     HFLIFKEGFKTLISQVYVNDDDRLETDVQFGVTRALVGNYVRHNDPAPASGVKGEWYS
                     LDQIFAMEPGKSRLPKPPIR"
     gene            2716..>3270
                     /gene="pgsA"
                     /locus_tag="VLJ17_19130"
     CDS             2716..>3270
                     /gene="pgsA"
                     /locus_tag="VLJ17_19130"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HSV25132.1"
                     /translation="MNAISSRPLPARPLALPNLLTYARIAAVPVVVALMFWQSIFDGP
                     LWLRWVALAIFISAGVTDILDGYLARTWGQQSSLGRMLDPIADKLLVASCLLMLAAED
                     TIRGWSLLAAVVILCREILVSGLREYLAELRVGVPVTRLAKWKTTGQMVAIGFLIAGE
                     AGDRIVPVVTEIGILLLWLSAILTL"
BASE COUNT          635 a          945 c         1001 g          689 t
ORIGIN      
        1 gctcgacagc cgtatcacgc gcatgatcgc ggcgacagtg tcgctggaat ttgtctctac
       61 taaaacagag accgaagcgt tattgcttga ggcgaatttg attaagcgtt tgcggccgcg
      121 tttcaatgtt cttctgcgcg acgacaaatc attcccctat attctgatca cgtccgatca
      181 ttgggcgccg caaatcttca agcatcgcgg tgcgcgaact cggccaggcc actattacgg
      241 accgtttgct tccgcgggcg cggtcaatcg tacaatcaac gcgcttgaac gcgccttcct
      301 cctgcgctcg tgctcggatt cgtattttga ggcgaggacg cggccgtgcc tgctccacca
      361 gatcaagcgc tgctcggcgc cctgcacgcg tgaaatagac tttgccggct ataccgaact
      421 tgtgcgcgaa gccaatgagt tcctctccgg ccgcagccag tcggtacaga aggaaatggc
      481 cgccgagatg gatcaggctt cggcttcgct cgatttcgaa cgcgccgcaa tctatcgcga
      541 ccgactgtcg gcgttgtccg cgatccagtc tcatcaaggt atcaatccgc gcagcctcga
      601 agaagccgac gtcttcgctg tgcatcaggc tggcggctat tcgtgcgtcg aggtgttttt
      661 cttccgcacc gggcagaact ggggcaatcg tgcttacttc ccgaaagctg accgtgcgat
      721 cggcccagat gaggttttga gcgcgttcct cgcacagttt tacgacgaca agccaccacc
      781 gcgctgcatc ctggtgtcgc atgaattcga agaacgcgaa ctgttggcgc aggcgctgag
      841 caccaagagc gagcggaaag tagaggtatc ggtgccgcag cgcggcgagc gcaaggaact
      901 ggtgcagcac gcacaggcca acgcgcgcga ggcccttgcc cgcaagctgg ccgacacatc
      961 ctcgcagcag aagctgcttg gcgcgctgac cgagactttt gcgttgccac gcgcgccgcg
     1021 ccgcattgaa gtgtatgaca atagccatat cagcggcagc aacgcagtcg gtgccatgat
     1081 cgtcgccggc ccggagggat ttcggaaaaa ccagtatcgg aagttcaata tccgctcggc
     1141 cgaacttagg cctggcgatg actacggcat gatgcgcgaa gtactgcagc gccggttcaa
     1201 gcggctgctg gaggaaagcc cgcgcagcgc ggtggccggg atgctcgccg ctgtattcaa
     1261 gggtgacgat gaagaccaac cgtggccgga tctggtgctg atcgacggtg gtcaaggtca
     1321 gctcaaggcc gcccaggaga ccttgagcgc gctcggggtg acggacgtac cgttggttgc
     1381 catcgccaag ggccccgatc gcgatgccgg tcgagagacc ttcttcatgc cgggacggga
     1441 cccattcaaa cttccgccgc gtgatccttt actctatttc atcgagcggc tgcgcgatga
     1501 agcccacaga ttcgcagttg gctcgcatcg cgtgcgacgc aagaaagata ttcgcgagtc
     1561 cggtttgcag gagattccgg ggattggtcc cacccgcaag cgggcattgt tacggcattt
     1621 tggcactgtg aaagcaattg aacgtgcaag tctgcccgat cttgcccaag tacccggaat
     1681 taatgcggag accgcgcgaa agatatatga gttcttccac gactcagcgg ctcactagac
     1741 ggaaagcgat aatgatcatt cagcgtcagg aagacgtcac caaagcggtg acggaagcct
     1801 tcaagaacac gcaacccccg cgcgtgcgcg aaattcttat ttcgatggtg gagcacctgc
     1861 atgcctttgc gcgcgatgtg cgtcttaccg aggaggagtt tgagaaggcc gttcagtatg
     1921 tcgtgcggct tgggcagaag accgacgaca accataacga agcggtgttg atgtcaggtt
     1981 cgcttggctt ctcgacgctg atctgcctgc ttaacaacgg caacaaagga cagaccgaga
     2041 cgactgctaa tctgctcggt ccgttttggc gcatgaattc gccgcgcacg gaaaacggtg
     2101 cgtcaatcgt ccgttcgccg acacccgggc cggcgctttt cgtcaattgc tgggtgaagg
     2161 accagaaggg caagccaatc gccggcgccg aggtcgatgt ttggcattcc tcgcctgagg
     2221 gtttttatga acagcaggac cccaagcagg cgccgatgaa cttgcgcggc aagtttctga
     2281 cggatgcgca gggccaattc gggtttcgta gcgtgaagcc ggccgggtac ccgattcccg
     2341 tcgatgggcc cgttggggat ctcgtccggg cgaccgggcg ccacaactat cgtcctgctc
     2401 atttgcactt tctgatcttc aaggaaggct tcaagaccct gatctcgcag gtctatgtca
     2461 atgacgatga caggctggag accgacgtgc agttcggcgt tacccgcgca ctggtcggca
     2521 actatgtgcg acacaatgat ccggcgcccg caagcggcgt gaagggcgag tggtattcgc
     2581 tcgatcagat cttcgcgatg gagccgggca aaagccgcct gcccaagcca ccgatccggt
     2641 gaagatctgc taatcagcgg gggttgtccg acaacgccgg ttgaccttgc cgcggcgtag
     2701 gtgttctttt cccgcatgaa tgccatcagt tcccggccgc tgccggcgcg ccccctcgcg
     2761 ctgccgaacc tcctgaccta tgcgcgcatc gctgccgttc cggtggtggt ggcgttgatg
     2821 ttttggcaaa gcatcttcga cgggccgctg tggttgcggt gggtggcact ggccattttt
     2881 atatcggccg gcgttaccga catactcgat ggctatttgg cacgcacgtg gggacagcag
     2941 tcctcgctcg gccgcatgct cgacccgatt gcagacaagc tgcttgtcgc gtcttgcctc
     3001 ctgatgttgg cggcagagga taccatccgt ggttggagcc tgctggccgc ggtagtcatt
     3061 ctctgccgcg agattctggt gtcaggcttg cgtgaatatc tcgcggaatt gcgggtgggc
     3121 gttccggtga cgcggctcgc caagtggaag accaccgggc agatggtcgc gattggattt
     3181 ctcatcgcgg gcgaggccgg tgatcggatt gttcccgtgg tcactgagat tggcatcttg
     3241 cttctgtggc tgtcggcaat cctcacgctc
//
LOCUS       DATILV010000790         8029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2749851, whole genome shotgun sequence.
ACCESSION   DATILV010000790 DATILV010000000
VERSION     DATILV010000790.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8029
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2749851"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            131..406
                     /locus_tag="VLJ17_19135"
     CDS             131..406
                     /locus_tag="VLJ17_19135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1153 domain-containing protein"
                     /protein_id="HSV25133.1"
                     /translation="MNEPHRPRVKYVIGPDGSPLTIADLPAPGTKRWVIRRKAEVVAA
                     VRGGLLSLEEACSRYTLTVEEFLAWQYSIDRHGLAGLRTTRIQQYRQ"
     gene            703..2313
                     /gene="fliF"
                     /locus_tag="VLJ17_19140"
     CDS             703..2313
                     /gene="fliF"
                     /locus_tag="VLJ17_19140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007614075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009431 - bacterial-type flagellum basal
                     body, MS ring [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body MS-ring/collar protein
                     FliF"
                     /protein_id="HSV25134.1"
                     /translation="MQGLVEFVKTLGPTRLAAMGAVTVALIGFFAVLIMRVTAPVMVP
                     LFTDLSLEDSSAIIKDLERQAIPYEMRNEGTIVMVPKDRVSRLRMKLAEGGLPRGGGI
                     GYEIFDKSDALGTTSFVQNINHLRALEGELARTIRALDRVQFARVHLVMPERTLFARD
                     QAEPSASIVLKVRGQLEAQQVRAIRHLVASAVNGLKPARVSIVDETGRLLANGASDEP
                     AVGSVSDERKTGFERRMRDQIEAIVSSVVGPGRARVELTTEFDFNRITQTSERFDPEG
                     RVLRSTQTKEESTNAVDPAGQVSVANELPGAQPNATAGRDSTKKSEEIANYEISRTTK
                     TEVVEGGRLNRISVAVLVDGSYVKNDKGEVAYQERSSQEIDRIATLVRSAIGFDQRRG
                     DQVEVINLRFAETPGLAIPEPTGLLAMLQFTKDDIMHGVELLVLGLLGILVVLMVVRP
                     LVRRIIEPDKDAAAPQAQAALAGPPAPEPPPAVINTQTGRMLEFAKVQGKVQAEAVKQ
                     VGELADKNPHETAAIIREWLTEPADATS"
     gene            2329..3399
                     /gene="fliG"
                     /locus_tag="VLJ17_19145"
     CDS             2329..3399
                     /gene="fliG"
                     /locus_tag="VLJ17_19145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009433 - bacterial-type flagellum basal
                     body, C ring [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="HSV25135.1"
                     /translation="MAKLASQLASTAPRGSLPNGPSEPTKPMTGPERAAVLLLALGEE
                     HGAKVWAQLDDDELRQLGVAMSTLGTVEASTVESMMVEFITKLSHSGAVMGNYDATER
                     LLRQFIPSERVANIMDEIRGPAGRNMWEKLSHVQEDVLANYLKNEYPQTIAVVLSKLS
                     TMHAGRVLTILPEEVAIDVVTRMLKMDTVQKDVMDRLEQTLRTEFISNLARTRRRDAH
                     EVMAEIFNSFDRQTEARFMSSLEELNKEAAENIKKLMFTFDDLAKLDNGAIQTLMRQV
                     DKEKLAVALKGANESVRKIFLTNMSQRAGKMLTEDMEALGPVRLKDVDDAQSSLVNMA
                     KDLAAKGEIVIVKGGGDEELVY"
     gene            3494..4111
                     /locus_tag="VLJ17_19150"
     CDS             3494..4111
                     /locus_tag="VLJ17_19150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007614077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FliH/SctL family protein"
                     /protein_id="HSV25136.1"
                     /translation="MTAGAKFLFNTDFGTVKDAPPKISPADHQAAVTAAELGGYQRGL
                     TAAEARARVEAERRAAVAYERIADALTNIATELKTIEGRLEAEAVEVAVAVARKLAPA
                     LVAREPIAEVAALATECFTAFLAAPHLVVRVNCELYATACERLDEIARSRGFEGRLVV
                     LGEADIALGDCRIDWADGGVIRDRAAIASAIDELVARYLAARRTA"
     gene            4133..4486
                     /gene="fliN"
                     /locus_tag="VLJ17_19155"
     CDS             4133..4486
                     /gene="fliN"
                     /locus_tag="VLJ17_19155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008963123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_function: GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HSV25137.1"
                     /translation="MADQDKSNVPLPNLDRDGGGIAEAPATSHPDAMVRSAADLEAVF
                     DVPVQVSAVLGRARMDVGDLLNLTPGAVLELDRRVGEAIDIYVNNRLVARGEVVLVEE
                     KLGVTMTEIIKADRS"
     gene            4527..5894
                     /locus_tag="VLJ17_19160"
     CDS             4527..5894
                     /locus_tag="VLJ17_19160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSV25138.1"
                     /translation="MRLLIVGTLNGQLTAATKIAMDKGASVTHADRIDTAMAVLRSGK
                     GADLLMVDVVIDIRNLVLRLEAERIHVPIVACGTQNDARAAVAAIHAGAKEYIPLPPE
                     PEMIAAILAAVADDTRELVYRDEAMTHLIRLAEQIAPSDASVLITGESGTGKEVMARY
                     VHSHSARARGPFISVNCAAIPEQLLESELFGHEKGAFTGAIARRIGKFEEANGGTLLL
                     DEISEMDVRLQAKLLRALQERVIDRVGGSRPVSVDIRVIATSNRNLGDAVREGAFRED
                     LLFRLNVVNLKIPALRERPSDIIELAQHFVRKYSEANATALRPLSAEAKRQLAVGRWP
                     GNVRELENTMHRAVLLATGDEIGIAAIIAPDGGRLDTTKPPAVAHAALAAEAVTRALV
                     GRTVADVERDLILETLKHCLGNRTHAANILGISIRTLRNKLNEYAADGVPVPPPNNGE
                     VRGAA"
     gene            6097..6768
                     /gene="minC"
                     /locus_tag="VLJ17_19165"
     CDS             6097..6768
                     /gene="minC"
                     /locus_tag="VLJ17_19165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018454545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004857 - enzyme inhibitor activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HSV25139.1"
                     /translation="MPLRGRSYMAFALTPEPPIADWLGELDAWLRGSSGFFAGRPVVL
                     DLSAVTLTSSAIAHLISELGARGIRIMGLEGVAAEKLGPGLPPLVTGGRPAPVEAISP
                     KSEPVSSARDSEPTSLVVESPVRSGQSIFFPDGDVTVLGSVGSGAEVIAGGSIHIYGT
                     LRGRAMAGTSGIRKARIFCTRLEAELLAIDGYYRTAEDLDATLLGKPVQAWLAGETLN
                     ISEID"
     gene            6790..7605
                     /gene="minD"
                     /locus_tag="VLJ17_19170"
     CDS             6790..7605
                     /gene="minD"
                     /locus_tag="VLJ17_19170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006073438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HSV25140.1"
                     /translation="MGKVIVVTSGKGGVGKTTSTAALGAALARSGHNVVVVDFDVGLR
                     NLDLVMGAERRVVFDLINVVQGVAKLPQALIRDKRLETLYLLPASQTRDKDALTEEGI
                     ARVIADLRSRFDWVICDSPAGIERGATLAMRFADEAVIVANPEVSSVRDSDRIIGLLD
                     SKTEKAERGERMAKHLLIARFDPARATRGEMLGIQDVLEILSIPLLGVIPESEEVLRA
                     SNLGAPITICGQQSAPAHAYMDAARRLTGEEIEMSIPTEKRGLLTKLFGRRAA"
     gene            7602..7868
                     /gene="minE"
                     /locus_tag="VLJ17_19175"
     CDS             7602..7868
                     /gene="minE"
                     /locus_tag="VLJ17_19175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007591739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0032955 - regulation of division septum
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="HSV25141.1"
                     /translation="MRLFRFLKPVSSAPVARERLQILLEYERRMVSQSSLITTLREEI
                     LAVVSRHVTIDPEQIHVSVDTGDGFSTLAVDIQIPNRVGAVGGR"
BASE COUNT         1618 a         2456 c         2480 g         1475 t
ORIGIN      
        1 cttgcgaccg tcatcacaac aacgcggata ttttttgcac gcactgagct tagttaaatt
       61 ttaagccgca cagggtaaat tcacccagag ttagtcatgt atcgtctatt ttgaagtgcg
      121 tgagagtgac atgaacgagc cccaccgccc gagggtgaag tacgtcatcg ggcctgatgg
      181 tagtccgctt acgatcgccg atctccccgc gcctggaaca aagcgctggg taattcgccg
      241 caaggcggaa gtcgtggcgg cagtgcgcgg cggtcttctt tcgctcgaag aggcctgcag
      301 ccgctatacg ctcacggtcg aggaattctt ggcttggcaa tactcgatcg accgtcacgg
      361 ccttgccggt ctgcgcacga cccgtatcca gcaatatcgc caataggcac acgaccggcc
      421 ccgctcccac tggccgagcc tacaacggcc ggatccagtt tttggggcgt cgatacggcg
      481 ggcttctcgc aagccaaatg gtcgatccgc gataccccaa agcgtgacgt gccggtggac
      541 cgcatgtcct gccagtacct gcagtcggca tgcctgtggc attgcggggc ctcatttctt
      601 ccgaccatta accaaatcga aaccacccgc ccggcaaaac ttgcctagcc tggcattgct
      661 gccagccctt gggttgcagg agcccatgtt ggaggttgcg gggtgcaggg tctagtcgaa
      721 tttgtaaaga cgctggggcc tacccgactt gccgcgatgg gcgcggtgac ggtagcgctg
      781 atcgggtttt tcgccgtgtt gatcatgcgc gtcacagctc ccgtcatggt gccgttgttt
      841 accgatctgt cgctggagga cagttccgcc atcatcaagg acttggaacg tcaagccatc
      901 ccgtacgaaa tgcgaaacga ggggacaatc gtgatggtgc cgaaggaccg ggtctcgcgg
      961 ctacgcatga agctcgccga gggcggttta ccgcgtggcg gaggcatcgg ctatgaaata
     1021 ttcgataagt ccgacgctct gggtaccacc tcgttcgtgc agaacatcaa tcatctgcgt
     1081 gcgctcgaag gcgagcttgc ccgcaccatt cgggcactcg atcgggtgca atttgcccgc
     1141 gtccacttgg tgatgcccga gcgcacattg tttgcgcgcg accaagcgga accctccgcc
     1201 tcgatcgtgc tcaaggtgcg cggccaactc gaagcccagc aggtccgcgc gattcgccac
     1261 ttggtggcgt ccgctgtcaa tggactcaag ccggcacggg tgtcgatcgt cgatgaaaca
     1321 gggcgcctgc ttgcaaacgg cgcatccgac gagccggccg tcggcagcgt ttcggatgaa
     1381 cgcaagaccg gattcgaacg ccgcatgcgg gatcagatcg aggcgatcgt ttcctcggta
     1441 gtgggtcccg gccgggctcg ggtcgaactc acgaccgagt tcgacttcaa tcggatcacc
     1501 cagacctcgg agcggttcga tcccgaggga cgcgtgttgc gctcaactca aaccaaggag
     1561 gaaagtacca acgcggtcga tccggccggt caggtttctg ttgccaacga attgccgggc
     1621 gcgcagccga acgcgacagc gggccgcgac tcgacaaaaa aatccgagga gatcgccaat
     1681 tacgaaatct cgcgcaccac caagacggag gtcgttgagg gtggcaggtt aaaccgcatt
     1741 tcggtcgccg tgctggtgga tggcagttat gtcaagaacg acaagggcga ggtcgcctac
     1801 caagagcgct ccagtcaaga aatcgatcgc atcgccacgt tggtgcgttc ggcgatcggg
     1861 tttgaccaac gccgcggcga ccaggtcgag gtcatcaatc tgcggttcgc cgaaacgccg
     1921 gggctcgcca tcccggagcc gaccggcctg ctcgcgatgc tgcaattcac taaggacgac
     1981 attatgcacg gcgtagagct cctggtacta ggactgctcg gtatcctcgt cgtcctgatg
     2041 gtcgtgcgtc ccctggttcg ccgcatcatc gaaccggaca aggatgcggc ggcccctcaa
     2101 gctcaggctg cattggcagg gccgccggcc cccgagccac cgccggccgt aatcaatacc
     2161 cagaccggca gaatgttgga attcgccaag gtacagggaa aagtgcaagc cgaagcggtc
     2221 aagcaagttg gtgagcttgc cgacaagaat ccgcatgaaa ccgctgcaat catccgcgag
     2281 tggctgaccg aaccagccga cgccactagt taagtcgtca aacgcgccat ggcaaaactt
     2341 gcctcgcaac ttgcctcgac agccccccgc ggttcgttgc cgaacgggcc gtccgagcct
     2401 accaaaccca tgaccggacc ggagcgcgcc gccgtgcttc tgcttgcgct cggagaggaa
     2461 cacggggcga aagtctgggc gcaacttgac gacgatgaat tgcgccagct cggtgttgca
     2521 atgtcgacgc ttggcaccgt cgaggcgtcg accgtcgaaa gcatgatggt ggagttcatc
     2581 accaaacttt cccactccgg cgccgtgatg ggcaattacg acgctaccga gcgcctgctc
     2641 cggcaattca tcccgtccga gcgggtcgcc aacatcatgg acgagattcg tggccccgcg
     2701 ggccgtaaca tgtgggagaa actttcccac gtccaagagg acgtgctcgc caactatctc
     2761 aagaacgaat atccgcagac cattgcggtc gtattgtcca agctgagcac catgcatgcg
     2821 ggccgcgtgc tcaccatcct gcctgaggaa gtcgcgatcg acgtcgtcac ccgtatgttg
     2881 aaaatggaca cggtgcaaaa ggacgtgatg gatcgcttgg aacaaaccct gcgcaccgag
     2941 ttcatctcca acctcgcacg gacgcggcga cgcgacgccc acgaggttat ggcagaaatc
     3001 ttcaacagct tcgaccggca gaccgaagcg cgcttcatgt catcgcttga ggagctcaac
     3061 aaggaggcag cggagaacat caagaaactg atgttcacat tcgacgatct cgcaaaactc
     3121 gacaacggcg caatccagac actgatgcga caagtcgaca aggaaaaact tgctgtagcg
     3181 ctcaagggcg cgaacgaaag cgtccgcaag atctttctca ccaacatgtc ccagcgcgcc
     3241 ggcaagatgt tgactgagga catggaggcg ctagggccgg tgcgcctgaa ggatgtagac
     3301 gacgcacagt cgagcttagt caacatggca aaggatctcg ccgcgaaggg cgagatcgtg
     3361 atcgtcaagg gtggtggcga cgaggagttg gtctattgac cgcaccgacg agcgattatg
     3421 aacgattcga ctgcgtcgcc ggctgcgctg gcggcgatgt cgcccatgct aacgactcca
     3481 caagggcatt gccatgacgg caggcgccaa atttcttttc aacaccgatt tcggcaccgt
     3541 caaggacgcg ccgccgaaaa tctcgcctgc agaccatcaa gcggcagtca ccgctgccga
     3601 actcggcggc taccaacgcg ggctcacagc agccgaggcg cgggcacgtg tcgaagcgga
     3661 gcggcgggcc gccgtcgcct acgagcgtat cgctgacgcc cttaccaaca ttgccaccga
     3721 actgaaaaca atcgaaggac gtctggaggc ggaggctgtc gaagtggcgg tcgcggtggc
     3781 ccgcaagctg gcgccagcgc tggtggcacg cgaaccgatt gctgaagttg cagcgctcgc
     3841 aactgaatgc ttcaccgcgt tcctagcggc accgcatctg gtggtgcgtg tcaactgcga
     3901 actttatgcc acagcgtgcg agcgtctcga cgagattgcg cgcagtcgcg gcttcgaggg
     3961 ccggttggtg gtgctcggcg aagccgacat cgcgctcggc gactgtcgca tcgactgggc
     4021 ggacggcggc gtcatccgcg accgcgcggc catcgcttcg gcgatcgacg aattggtcgc
     4081 gcgctatctc gcggcacgcc ggacggctta agacaggtaa gagacggaca aaatggccga
     4141 tcaggataag agcaacgttc ctctccccaa cctcgaccgc gatggcggcg ggatagcgga
     4201 agctccagcg acatcccacc cggacgcgat ggtgcgcagc gccgccgatc tcgaggcggt
     4261 attcgacgtt ccggtgcagg tctcggcagt gctggggcgc gcccggatgg acgtcggaga
     4321 ccttcttaat ctcaccccgg gcgcagtgct ggagctcgat cggcgcgtcg gcgaggcgat
     4381 cgacatttat gtgaacaacc ggctggtcgc gcgcggcgaa gtcgtgctgg tcgaagagaa
     4441 gctcggcgtg accatgacgg aaatcatcaa agcggatcgc tcctaatgcg ggcgatgcgg
     4501 caatacttag gtaatggagg catgatatgc ggctgctgat cgtcggaacc ctcaacgggc
     4561 agctcaccgc ggcgactaag atcgccatgg acaaaggcgc atccgtgacc cacgcggatc
     4621 gcatcgatac cgccatggcg gtgttgcgtt cgggcaaagg cgccgacctc ctgatggtcg
     4681 atgtcgtcat cgatattcgc aatctcgttt tgcggctcga ggccgaacgc atacacgtgc
     4741 cgatcgtggc ctgtggaacc cagaacgatg cccgcgctgc ggttgcggcc attcatgcgg
     4801 gcgccaagga atacatccca ctgccgccgg aacccgagat gattgccgcc atattggcgg
     4861 ctgtcgccga tgacactcgt gaactcgtct atcgcgacga agccatgacc cacctcatca
     4921 ggctcgccga acagatcgcg ccatcagatg cgtcggtctt gattaccggc gagtccggca
     4981 ccggcaagga agtgatggcg cgctatgtgc attcgcattc cgcgcgtgca cgcggcccct
     5041 tcattagcgt caactgcgct gcgattcccg agcagctcct ggagtccgag ctgtttggac
     5101 acgaaaaggg agccttcacg ggtgccattg cgcggcggat cggcaaattt gaagaagcaa
     5161 atggcggcac gctgctgctc gacgagatct cggaaatgga tgtgcggctg caagcgaaac
     5221 tcctgcgcgc cctgcaggag cgggtcatcg accgggtcgg cggcagtcgc ccagtgtcgg
     5281 tcgacatccg tgttatcgca acttcgaacc gcaatctcgg cgacgccgtg cgcgagggcg
     5341 ccttccgtga ggaccttctg ttccgcctca atgtggtgaa tctcaaaatt ccggcgttac
     5401 gggagcggcc ctccgatatc atcgagctcg cccagcactt cgtccgcaaa tattccgaag
     5461 caaacgcaac ggcattgcgt ccgctatccg cggaggccaa acgccagctt gccgtcggcc
     5521 gctggcccgg caacgtgcgc gagctcgaga acaccatgca tcgtgccgta ctgcttgcca
     5581 cgggcgatga gatcggcatc gcagctatca tcgcgccgga tggcgggcgg ctcgatacca
     5641 cgaagccgcc cgcggttgct cacgcggcgc ttgccgccga ggcggtaaca cgcgccctcg
     5701 tgggccgcac cgtcgccgac gtcgaacgcg atctcatcct tgagacgctc aagcactgcc
     5761 tcggcaaccg cacgcacgcc gccaatattc tcggtatctc gattcgcaca ctccgcaaca
     5821 agctcaacga atatgccgcc gacggcgtcc cggtgccccc gccaaacaat ggtgaagtac
     5881 gtggcgcagc ctgactcacg accgcctcac cgccgccttg gtgttgccgt ggtgatgccg
     5941 tggcttgggg actcaggccg aatcagccaa attcccattg ctgccgggac acgtcgggtg
     6001 ctcaatcgct gcgaaccgta tcggtgtgat tcgccggtca ggagccgtca ggtgagtgag
     6061 gtcacagtgc tcagcgccgc tcgtcaacgt ggagccatgc cgttgcgggg gcgatcctat
     6121 atggcgttcg ccttgacgcc ggaacccccg atcgccgatt ggcttggaga acttgatgct
     6181 tggttacggg ggtccagtgg ttttttcgcc ggccggccgg tggtgctcga tctttcggcc
     6241 gtgacgctca ccagttccgc aattgcgcat cttatttccg agctcggagc gcgcggtatc
     6301 cggatcatgg ggctggaggg ggtggccgcc gaaaaactcg gccccggtct accgccgctg
     6361 gtaactggag gccgaccggc accggtcgaa gccatcagcc ccaagtccga gcccgtgtct
     6421 tctgcgcggg atagcgagcc cacgtcgctc gtggtggaaa gtccggtccg gtccggccaa
     6481 tcgatcttct ttccggatgg cgacgtgacc gtgctcggat cggtcggttc gggcgccgag
     6541 gtcatcgccg gcggctccat ccacatctac ggtaccctgc gaggccgtgc catggcggga
     6601 acgtcaggca tccgcaaggc gcgcatcttc tgcacgcgcc ttgaagcaga acttctggcg
     6661 atcgacggct attatcgcac agccgaggac cttgatgcga cgctgctggg caaaccggtc
     6721 caagcttggc tggccggcga aacactaaat atttccgaga tagactgaaa tgggcgttgg
     6781 aggtgacgaa tgggcaaggt aatcgtcgta acatccggca agggcggtgt cggcaagacg
     6841 acgtcaaccg ccgcgctggg tgccgcattg gcgcgatccg gacacaatgt cgtggttgtg
     6901 gatttcgacg tcgggctgcg caacctcgac ctcgtgatgg gcgctgaacg acgcgtggta
     6961 ttcgacctca tcaatgtggt ccagggtgtc gccaagctac cgcaggcgct gatccgcgac
     7021 aaacgccttg agacgctgta cctgcttccg gcctcgcaaa cgcgcgacaa ggatgcgctt
     7081 accgaggagg gcatagcgcg cgtgatcgca gatttgcgct cccgattcga ctgggtgatt
     7141 tgcgacagtc cggccggcat cgagcgcggc gcgacgctcg cgatgcgttt tgccgatgaa
     7201 gccgtcatcg tcgccaatcc ggaagtgtcc tcggtgcgcg attccgatcg catcatcgga
     7261 ttgctggact ccaagactga gaaggccgag cgcggcgaac gcatggccaa gcatctcctc
     7321 atcgcgcggt tcgacccggc gcgggcgacg cgcggcgaaa tgctcggcat ccaagacgta
     7381 ctcgaaatcc tgtcaatccc gctgctcggc gtgatcccgg agagtgagga agtgctgcgt
     7441 gcctccaatc tcggcgcacc gatcacgatt tgcggccaac agagcgcacc ggcgcacgcc
     7501 tacatggatg cggcgcgccg gctgacgggt gaggagatcg agatgtcgat tccgaccgag
     7561 aaaagaggat tgctcactaa actctttgga cggagagcag catgagacta ttccgttttc
     7621 tcaagcccgt cagttcggcg cccgttgcac gcgagcggct gcaaattctg ctcgaatatg
     7681 aacgtcgcat ggtcagccag tcctccctga tcacgacatt gcgagaggag attcttgccg
     7741 tcgtgagtcg gcacgttaca atcgacccgg aacaaattca tgtgtcggtc gacaccggcg
     7801 atggattctc aaccttggcc gtcgacatcc agatcccaaa tcgcgtcggc gcggtggggg
     7861 gacggtaggg ccgccaagcc gcaatgaccg ggaagacccg gccactgtca ttcaaagcat
     7921 gtctcgataa agttgccctg ccggtcgcgc gcgcgaaatg ggtgtgcgtt gccgcccatc
     7981 gacttcacgc atgcattgcc ggaacatcga gccggcaatg aggttcgct
//
LOCUS       DATILV010000791         2801 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_444587, whole genome shotgun sequence.
ACCESSION   DATILV010000791 DATILV010000000
VERSION     DATILV010000791.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2801)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2801)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2801
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_444587"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            32..847
                     /locus_tag="VLJ17_19180"
     CDS             32..847
                     /locus_tag="VLJ17_19180"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV25142.1"
                     /translation="MAQHIHGPLYYERMGRTGPVIAFIHPNPMDQSCWIFQMAHLSTW
                     YRCIAIDIPGYGRSPKADAGLTMTDMAEACWEAIDDALPGEKAILVGCSVGSSLAPHM
                     YHLRPDKTAALVLSGTGYNPNKEFTKGRIANYTANGIDYRWAYTFEDLSASFRTTPMA
                     HFFANLFTERNEHADVETIIHQFKALAQPYPEGHHEHIACPTIILTGSEDGSHQRAFA
                     LKALIPNCELRTLPGAGHACQIEQPWLFDRFMIEFLTKHGLFPGASKPTKSIV"
     gene            complement(886..1593)
                     /locus_tag="VLJ17_19185"
     CDS             complement(886..1593)
                     /locus_tag="VLJ17_19185"
                     /inference="COORDINATES: protein motif:HMM:NF025871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing redox enzyme family protein"
                     /protein_id="HSV25143.1"
                     /translation="MKAQEWRQALGGCVRDFFRTPEMEHFYSLKLTRERARIYLLQLG
                     LYARQRRNNWPQVAANCPEFDVKKRIMSHEYEELIEDEHSKTGHLDLIFRQGKEVGLS
                     VDDVMNAEPLPTTKAATYAWFWIARTRPWQEAIAASTIAEWTNDDRLLGDMGGGNCSR
                     LYKIWSRDLNFSAAQMPNFTAHSKADVKHSDMFIDVLEKYVLPGREQDVLATAKESMD
                     IHRAYFGGMAQAMEKAS"
     gene            complement(1608..>2801)
                     /locus_tag="VLJ17_19190"
     CDS             complement(1608..>2801)
                     /locus_tag="VLJ17_19190"
                     /inference="COORDINATES: protein motif:HMM:NF015214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase N-terminal
                     domain-containing protein"
                     /protein_id="HSV25144.1"
                     /translation="FWADASYGFLGRSPDHVASFFAGFAGAPAFYARGGQQFAENLVR
                     FAAKAADEDLYISYVIVHPTIDRAKPAHQQAEPYLYAGIAAERDNGIVIRGAQMLGTG
                     SVMSDYVLVTVILPLRPGDEDYAISCVVPNGAPGLKLYPRRPYALGPTSVFDYPLSSR
                     FDETDSLVVFDDVFVPWEDVFIYKNLELTVGQFSVTAAHVLGNTQSHIRSWAKLQFLV
                     GLVKRCMDLSGRSITSETIAQLGDLATRVSLVEGMILGAEAAAVPDSFGVMRPKDALL
                     YASQVFQQAMYPALLNQIRGLMGGSLIQLPATVGELGAPGSAADIERYVRWPKAGGRE
                     RVKLLKLLWDALGSEFGSRHLQYEMFYAGEPAAIQGREFRNFDWAAAEALVDRCLASY
                     DVDTP"
BASE COUNT          596 a          888 c          779 g          538 t
ORIGIN      
        1 tttttcaaca gcctgacaaa ggagaaatat catggcgcag cacattcacg gaccgcttta
       61 ctatgaacgg atgggacgca cggggccggt aatcgccttt atccatccca acccgatgga
      121 ccagtcgtgc tggattttcc agatggcgca cctatcgacc tggtaccgct gtatcgccat
      181 cgatatcccc gggtacggcc gctcgcctaa agccgacgcc gggctcacca tgaccgacat
      241 ggccgaggcc tgttgggaag cgatcgacga cgcgttgccc ggcgagaaag cgatcctggt
      301 cggctgttcg gtgggctcgt ccctcgcccc tcacatgtat cacctgcgcc ccgacaaaac
      361 cgcggcgctc gtgctgtccg gcactggtta caaccccaac aaggaattca ctaagggaag
      421 aatcgccaac tacacggcca acggtatcga ctatcgctgg gcctacacgt tcgaggatct
      481 gagcgcgtct tttcgcacca caccgatggc gcatttcttt gcgaacctct tcaccgaacg
      541 caacgaacac gccgacgtgg agacgatcat ccaccagttc aaagcgctcg cgcagcccta
      601 tcccgaaggc catcatgagc acatcgcctg tccgacgata atcctgaccg gcagcgagga
      661 cggcagccat cagagggcct tcgcacttaa agcgcttata ccgaattgcg agttgaggac
      721 tttacctggg gccggccacg cctgtcagat agagcagcct tggttattcg atcgctttat
      781 gatcgaattt ctcaccaagc acggcctgtt tcccggagca tccaagccga ctaagtcgat
      841 tgtctgaaaa taaaaagggc gacgccgtga atcgcccccc ttaggctagg atgccttctc
      901 catcgcttgc gccatgccgc cgaaataggc gcggtggatg tccatcgatt ccttagcggt
      961 tgcgagaaca tcctgctccc gtcccggcaa gacatatttt tccagaacat cgatgaacat
     1021 gtcggaatgt ttcacgtcgg ccttactatg cgccgtgaag tttggcatct gcgcggcgct
     1081 gaaatttaaa tcccgcgacc aaatcttata gagccgactg caatttcctc cgcccatatc
     1141 gcccaacagc cgatcatcat tggtccactc cgcgatggtg gacgccgcga tcgcttcctg
     1201 ccacggacga gtgcgcgcga tccagaacca cgcgtaggtt gccgccttgg ttgtcggcaa
     1261 cggctcggcg ttcatgacat catcgacact caaccctact tcttttcctt gacgaaaaat
     1321 tagatccaaa tggccggtct ttgagtgctc gtcttcaatg agttcttcat actcgtgcga
     1381 catgattcgt ttcttaacgt cgaactccgg gcaattggcc gccacctgcg gccaattgtt
     1441 gcgccgctgg cgagcataga ggcctagctg caaaagataa attcgcgccc gctcccgagt
     1501 tagtttgagc gaataaaaat gttccatctc cggcgtgcga aagaagtccc gtacacaccc
     1561 accgagcgcc tgtcgccatt cttgtgcttt catcaaacta cctcctgcta aggggtgtcg
     1621 acgtcgtagc tcgcgaggca acgatcgacc aaggcttccg cagccgccca atcgaagttg
     1681 cggaactcgc gcccctggat ggcggcgggc tcgcccgcgt agaacatctc gtactggaga
     1741 tgacgcgagc cgaactcgga gccaagagcg tcccacaaga gcttcagcaa cttcacccgc
     1801 tcgcgtcccc ccgctttcgg ccagcgcaca taacgctcga tatccgcggc cgagccgggc
     1861 gcccctagct cacccaccgt cgccggcaac tggatcagac taccgcccat cagcccgcgg
     1921 atctgattga gcagcgccgg atacatcgcc tgctggaaca cctggctggc gtagagcagg
     1981 gcatccttgg ggcgcatcac accaaacgag tcgggcactg ccgcggcctc ggcgccgagg
     2041 atcataccct ccacgagcga gacacgggtg gcgaggtcac cgagttgggc gatcgtttca
     2101 ctagtgatcg agcgcccgct gaggtccatg cagcgcttaa ccagccccac caggaactgc
     2161 agcttggccc acgatcggat gtgcgactgg gtgttgccta gcacgtgcgc cgcggtcacg
     2221 ctgaactgac ccaccgtcag ctccaggttc ttatagatga acacgtcttc ccacggcaca
     2281 aagacatcgt cgaagacgac gagcgaatca gtctcgtcga agcggctgga cagtgggtaa
     2341 tcgaacacgc tagtgggtcc gagcgcatag ggccggcgcg ggtagagctt caggccaggt
     2401 gcaccattcg gcaccacgca ggagatcgcg tagtcttcgt cgccgggcct gagcggcaag
     2461 atgaccgtga ccagcacata gtcggacatc accgagcccg tgccgagcat ctgcgcccca
     2521 cgaatgacga tgccgttgtc acgttcggcg gcgatgccgg cgtagagata gggctcggcc
     2581 tgctgatgcg ccggcttggc gcggtcgatg gtgggatgga cgatgacgta actgatgtag
     2641 aggtcctcgt cggcagcctt ggcggcaaag cgcaccaggt tttcggcgaa ctgttgcccg
     2701 ccccgcgcat agaacgccgg cgcgcctgcg aagcccgcga aaaacgacgc gacatgatcg
     2761 ggagagcgtc ccaggaagcc gtagctcgca tcggcccaga a
//
LOCUS       DATILV010000792         3642 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1726808, whole genome shotgun sequence.
ACCESSION   DATILV010000792 DATILV010000000
VERSION     DATILV010000792.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3642)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3642)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3642
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1726808"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            122..837
                     /locus_tag="VLJ17_19195"
                     /pseudo
     CDS             122..837
                     /locus_tag="VLJ17_19195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_040609789.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            1072..2004
                     /locus_tag="VLJ17_19200"
     CDS             1072..2004
                     /locus_tag="VLJ17_19200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013217000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ring-cleaving dioxygenase"
                     /protein_id="HSV25145.1"
                     /translation="MSGLHHITAIAGNASRNLDFYTRVLGLRFVKKTVNFDDPTTYHL
                     YYGDEAGRPGTILTFFPWEHAAPGRLGVGTTQETRFRVPATSLGYWSHRFVEKSFPHD
                     ALEKRFGETVLAFTDPDGMRLALVGAAIAEGEPAWSDGTIPAEHAVRGFHGVTVMVED
                     GPRTGALLKDVLGFAESGQDSSFTRYRAAAALGATVDVREAKGFLRGHVGRGSVHHIA
                     FRAADDAQQADMARKLLRDHKITPTEQKDRKYFRSVYFREPGGVLFEIATDQPGFSVD
                     EPLATLGQLLKLPPFLEPRRTELEGVLPPLESKA"
     gene            2001..2642
                     /locus_tag="VLJ17_19205"
     CDS             2001..2642
                     /locus_tag="VLJ17_19205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013217001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HSV25146.1"
                     /translation="MTGALSVEVAQAGSPLGREHPVAILLHGRGGTAQDMLSLAEAFG
                     QPNVTYLAPQAPGRTWYPYSFLAPYEQNEPALSHALEIVAQVVSRVMREDIPANSILL
                     LGFSQGGCLALEFAARNAKRYGAVVGLSAGLIGPKGAERNYDGSLASTPVFIGCSDVD
                     HHIPLWRVRESTEEMRRLGADVIERIYPRLGHTINDDEIMQVKKMLTELEGLK"
     gene            complement(2558..2944)
                     /locus_tag="VLJ17_19210"
     CDS             complement(2558..2944)
                     /locus_tag="VLJ17_19210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25147.1"
                     /translation="MGEAVIAVEDVPWYRLLSRSQWSTLIAANLGWTFDGYETCAVVL
                     TVGVALRELLDSSQYSQIPVYAGTVIALTLLGWGVGGLIGGVLADYLGHRKAVLDQSY
                     FRPSSSVSIFLTCIISSSLIVWPNRG"
BASE COUNT          798 a         1054 c         1053 g          737 t
ORIGIN      
        1 cacttgtcga gatctgacgg atggaatcga catagcagat cgcagagcaa gctgtactga
       61 tcggatcagc gcgtgcgtaa cgcgtggacg agccgtttac tgaccgctcc cttatgggaa
      121 ggcgaaggcc gtacctgcga aagctggcga tacctggact tggaccgcga tcgacgccga
      181 caataaactg atgatcgctt ggttggttgg cggccgcgat aacgaatacg ctatggcgtt
      241 tatggacgac ctgcgatctc gactagccaa tcgcgttcag cttaccagtg acggccatag
      301 cgcctatttg gaggcggtcg aacgcgcgtt tggcggcgat gttgactacg cccaggttgt
      361 gaagatttac gggcagcacc cgagagtgcg aagggtcgct atagcccggc cgaatgcact
      421 ggcgcggtca agaccccgat cgaaggtaac cctgacccga agcacattag cacgtcgttt
      481 gccgaacggc agaacttgaa catcaggatg cacacgagaa gattcacgag attgacgaat
      541 gcgtttagca agaggtttga aaatcacgct tgggccatcg cactgttcac aacctattac
      601 aatttcgtcc gcatccataa ggcgctgcgc atgtcgcccg cgatggccgc tggcgtgatc
      661 gatcgcttgt gggaaattgg tgatatcgtg gcgcttgtcg aagcggccga cgcgaagccg
      721 ggtaagcgca gaactacaag aagaggagga agaattcgat gccgtccaat caagtcaatg
      781 atccggaacc ctgacatagc cgcgccgaag aaatgcgaac gcttgccgag gacatgacag
      841 accttgatgc gaagggaaca gtgctcagaa tcgccagcga gtacgatcat ctagcaaaac
      901 gtgccgcgat gcgctctaaa gtctccaaaa tttcaaactg acccactacc gactgttgac
      961 tgcgtcaccg gaatactgac caaaatagcg ctgccgcgaa ggggacgcac acggggtatc
     1021 ggctcgctcc cgacaaagtc cgccaggacc gtaaactgaa agggtcaagc aatgtctggg
     1081 ctgcatcaca tcacggcgat cgccgggaac gctagtcgca atctggattt ttatacgcgc
     1141 gttctcggcc tgcgctttgt aaagaagacc gtaaatttcg acgatcccac aacctatcac
     1201 ctgtattatg gcgacgaggc cggtcggcca ggcacgatac tgacgttctt tccatgggaa
     1261 cacgccgccc ccggtcgcct cggcgtcggc accacacagg agacgagatt tcgtgtaccc
     1321 gccacgtcac tcggctattg gtcgcatcgc ttcgtggaga agagcttccc gcatgatgcg
     1381 ctcgagaaac gcttcggcga aaccgtgctg gcgtttactg atccggacgg catgcgtctt
     1441 gcccttgtcg gcgctgccat cgcggaaggt gaacctgcct ggagcgacgg cacaatcccc
     1501 gcggagcatg ccgttcgggg cttccacggt gtgactgtga tggtggaaga tggtccacgc
     1561 accggggccc ttctcaagga cgttctcggt tttgccgagt cgggccaaga tagttcgttc
     1621 acccgatacc gggcagccgc ggcgcttggc gccaccgtcg atgttcgtga agcaaagggc
     1681 ttcctccgcg gtcatgtggg ccgcggctcg gttcaccaca tcgccttccg ggcggccgac
     1741 gatgcccaac aggctgacat ggcgcgcaag ctcttgcgcg atcataaaat tacccccacg
     1801 gagcaaaagg accggaagta tttccggtct gtctatttcc gtgagcccgg cggcgtgctg
     1861 ttcgagatcg cgaccgatca gccgggtttc tcggtcgacg aacccctcgc gacactgggg
     1921 cagttgctga agctgccgcc gtttctcgaa ccacgccgca ccgagctcga aggcgtgctt
     1981 ccaccattgg aaagcaaggc atgaccggtg cgttgtctgt cgaggttgct caggcaggct
     2041 ctccgctggg gcgggagcac ccggtcgcaa tcctgctgca tgggcgcggc ggcaccgctc
     2101 aagatatgct ctcgcttgcg gaggctttcg ggcaaccgaa tgtgacctat ctcgcgccgc
     2161 aagcgcccgg ccggacctgg tatccctatt cgttcctggc gccgtacgaa cagaacgagc
     2221 ccgccctgtc gcacgctctg gagatcgtgg cgcaggtcgt cagccgcgtc atgcgggaag
     2281 acatcccggc gaatagcatc ctgctgcttg gcttctcaca agggggatgc cttgctcttg
     2341 aattcgcagc gcgcaatgcg aagcgttatg gcgctgtcgt agggttgagt gctggcctga
     2401 ttgggccgaa aggcgcagag cgcaactatg acggctcact tgccagcacc ccggtgttta
     2461 tcgggtgcag cgatgtcgac catcatattc cgctgtggcg ggtacgcgaa tccacagaag
     2521 aaatgcgcag attgggtgcc gacgtgatcg agcgtatcta tccgcgattg ggccatacga
     2581 tcaacgatga tgagataatg caggtcaaga agatgcttac agaacttgaa ggtctgaaat
     2641 aggattgatc caggacggct tttctatggc cgagataatc ggcaagcacg ccgccgatca
     2701 ggccgccaac gccccagccg agcagcgtca gcgcaataac ggtgccggcg tagaccggaa
     2761 tctggctgta ctgggatgag tcgagcagtt cgcgcagtgc gacgcctacc gtgagcacca
     2821 ccgcgcaggt ttcgtacccg tcgaacgtcc agccaagatt ggcggcgatc agcgtgctcc
     2881 attggctcct gctcagcagg cgataccacg gcacatcctc tactgcgatc acagcctcac
     2941 ccatggtcgc ccccccggcc ccttcgccgc ccgtgccatc ggtcggcgtg ccacccacca
     3001 ttttgctttg atgctaggat ttgtcgccgg atgtctggac atgcggcaat tggcgtcgat
     3061 cggcgaagct caacctaaat tgaactatgg tctagatggc cacactcgtc gagtaatttg
     3121 tttcgatgtc ttaataagga gatcccactg aagtccagtg cgatttcgcc acggcaatat
     3181 aaagtggcgc cttacatata ctagcaagat atactagcaa taaaatttgt acgaccgccg
     3241 gcggcctgct aaaacgcgcg cacgccttcg ggtgcccctt tccttgccgc tggcaccgcc
     3301 catcacgacg gcgacgcgct acgtcttttt cttgccaatc tggcggtttt atgccggaaa
     3361 atgtcccaag aactgccaga aaggcaaagc caaagcctgt gatcgaaaca cagcatctat
     3421 aacatgtttc ggtgcgcagc aatgcttggc caaatatatg attccaagca caggacaatt
     3481 gtcatttaca aaccacggta gtgctgctac tttaattctt gcaaaacatc attggaccgg
     3541 ggggatcgtg tggatgggcc gctttcgcgc gttttgcgcg cacagcctct aacctagggg
     3601 caggctccga ccgccgccga atgcggctcc atagaaaaca ag
//
LOCUS       DATILV010000793         2134 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_963758, whole genome shotgun sequence.
ACCESSION   DATILV010000793 DATILV010000000
VERSION     DATILV010000793.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2134
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_963758"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            55..1107
                     /locus_tag="VLJ17_19215"
     CDS             55..1107
                     /locus_tag="VLJ17_19215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011652272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV25148.1"
                     /translation="MPDDIDHQRRRFLGTAAMTMAVTQLGMVGAAKAQSSQDKRAAVP
                     PIKPGTHISFASLKQINAGVLNVGYAEAGPASGPAVILLHGWPYDILSYVDVAPLLAS
                     AGYRVIIPHLRGYGTTRFLADATPRNGQQSVVAADIIALMDALKIEKATLAGYDWGAR
                     TVNIMAALWPERCKGMVSVSGYLIGSQEASKMPLPPKAELEWWYQYYFATERGQAGYE
                     KYRHDFAKLIWQLASPKWGFDDATFDRSAASFDNPDHVAIVIHNYRWRLGLAEGEPQY
                     NALEKRLAAGPVITVPTITMEGDANGAPHPDPSAYAKKFSGKYTHRLIKGGIGHNLPQ
                     EAPQAFAEAVVDVDGY"
     gene            1324..>2134
                     /locus_tag="VLJ17_19220"
     CDS             1324..>2134
                     /locus_tag="VLJ17_19220"
                     /inference="COORDINATES: protein motif:HMM:NF025585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4331 family protein"
                     /protein_id="HSV25149.1"
                     /translation="MSHHYSGPALGFPHGDARLDLTDLYAFGKPGDDRKSILIMNVHP
                     SFSLEPRGPTRSDPFAHEAIYELKIDTDGDSVADIAYRVRFSPFEGGAQTATLRCVRG
                     AAAAGVGDTGDVLIEAAPVSLGRTPRVTEVGEHRLFAGWRSDPFFFDVLGVLGGFKFT
                     HQDFFADKDVCSIVLEIPNVSLAPGRVGIWARTLDGAGGRWVQADRGARPAQTPFLTG
                     EAIAAYTAAEPADDRQFVSVFAHSLEHAGGYAATDAERVAATLLPDILPFDH"
BASE COUNT          385 a          711 c          670 g          368 t
ORIGIN      
        1 ccggtgcaca tcccagcatc gaaccaagga gattcaccga tggctacgga caaaatgcct
       61 gacgacatcg accatcaacg ccgccgcttt ctcggcaccg cggccatgac catggctgtc
      121 acccaattgg gcatggtcgg ggctgcaaaa gcacaatcca gccaggacaa aagggccgcc
      181 gtgcccccca tcaagccggg gacgcacata tcgttcgcct cgctcaagca gatcaatgcc
      241 ggcgttctca atgtcggtta cgcggaagct ggtcccgcga gtggtccagc ggtcattctt
      301 ctgcacggct ggccctacga cattctcagc tatgtcgatg tcgcgccttt gctggcgtcg
      361 gcgggctacc gggtgatcat cccgcatctg cgcggctatg gcacgacgcg ctttctggcg
      421 gatgcgacgc cgcggaatgg ccagcagtcg gtggtcgcgg ccgacatcat cgccttgatg
      481 gacgcgctca agatcgagaa ggcgaccctc gccggttacg attggggcgc gcggacggtc
      541 aacatcatgg cggcgctgtg gccggagcgc tgcaaaggca tggtctctgt gagcggctat
      601 ctgatcggca gccaggaagc cagcaagatg ccgttgccgc ccaaggccga gctcgaatgg
      661 tggtaccagt attatttcgc caccgagcgt ggccaagcgg gctatgagaa ataccgacac
      721 gatttcgcta aactcatctg gcaactcgcg tcgccgaagt ggggtttcga tgatgccacg
      781 ttcgatcgca gcgcagcgtc cttcgacaat ccggatcatg tcgccatcgt gatccataat
      841 taccgctggc ggctcggcct ggcggaaggg gagccgcaat acaacgctct ggaaaagcgg
      901 cttgccgcag gtccggtgat caccgtgccc accatcacca tggaaggtga tgccaatggc
      961 gcgccgcatc cggacccgag cgcctacgcc aagaaattct cgggcaagta cacgcaccga
     1021 ctcatcaaag gcggcatcgg ccacaatttg ccgcaagaag ccccgcaggc cttcgccgaa
     1081 gctgtcgtcg atgtcgacgg ttattgatcg gcgttagctt gcagggcggc tcactcaggg
     1141 cgcggactct cttcgtgtca acgtcgcggc ggccgctcgg gctcgatacc aaagtgcaac
     1201 ggaagccggc gacggccgac gtcactttag gcgtggctcg atcagcgtcc gcagcgggcg
     1261 agaccgcagc cgcctccacg ccggtcacct gagccggcgc accgctaggg aaggatcgat
     1321 ccgatgtcac accactattc cgggcctgcg cttgggttcc cgcacggcga tgcgcgcctc
     1381 gacctcaccg acctctacgc gttcggcaaa ccgggcgatg atcgcaagtc gatcctgatc
     1441 atgaacgtgc atccgtcgtt cagcctggag cctcgcgggc ccacccggtc agacccgttc
     1501 gcgcatgagg cgatctacga gctcaagatc gacaccgacg gcgattccgt cgcggacatc
     1561 gcctaccggg tgcggttttc cccctttgag ggaggggcgc aaacggcgac gctgcgctgc
     1621 gtccggggtg cggcggccgc cggggtaggc gacacgggag acgtgctcat cgaagcggcg
     1681 ccggtctcgt tgggtcggac gccgcgcgta acagaggtcg gcgagcaccg cctcttcgcc
     1741 ggctggcgga gcgacccctt cttcttcgat gtgcttggcg tgctgggcgg tttcaaattc
     1801 acccaccaag acttcttcgc cgacaaggac gtgtgcagca tcgtcctcga aatccccaat
     1861 gtctctctgg cgccagggag ggtcggcatt tgggcccgga ccttggacgg cgccggcggc
     1921 cgctgggtgc aggccgaccg cggcgcgcgg cctgcgcaga cccccttcct gaccggcgag
     1981 gcgatcgccg cctacaccgc cgcggaaccg gccgacgacc gccaattcgt ctccgtgttc
     2041 gcgcactcgc tcgaacacgc cggcggctac gccgctaccg atgcggagcg ggtggccgca
     2101 acgctgctcc cggacatcct gcccttcgat caca
//
LOCUS       DATILV010000794        17998 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1986228, whole genome shotgun sequence.
ACCESSION   DATILV010000794 DATILV010000000
VERSION     DATILV010000794.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 17998)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17998)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17998
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1986228"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            190..360
                     /locus_tag="VLJ17_19225"
     CDS             190..360
                     /locus_tag="VLJ17_19225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25150.1"
                     /translation="MADAKPSYQWPDSASQHSNSHSLSDELQLLREETKRLRELVIQL
                     SKIAIKSAIDAK"
     gene            complement(437..2593)
                     /gene="pbpC"
                     /locus_tag="VLJ17_19230"
     CDS             complement(437..2593)
                     /gene="pbpC"
                     /locus_tag="VLJ17_19230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009274 - peptidoglycan-based cell wall
                     [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1C"
                     /protein_id="HSV25151.1"
                     /translation="MSGLQSPEARSSPSQGEGGKRPLFTVVAASFAAAILVATGAALL
                     WVVSLGPAPLGEGLEFSTTVVDREGRLLRPYATSDGRWRLPARADSVDPRYLELLIAY
                     EDKRFRKHSGVDPLALLRAGAQVLTHGRILSGGSTLTMQVARLLEPRTERSLAAKLRQ
                     LARAVEIERQLTKDEVLTLYLCLAPYGGNLEGVRAAALAYFGKEPKRLTLGEAALLVA
                     LPQSPQARRPDRSITAATRARDRVLDRVATAGIFETAEILRAKAEPVPAARKPMPTLA
                     PHAADDAVAASPGRSLVRLTIDAPWQASLEGLARERARALGPNISVAILAVDHQTSEV
                     LARVGSADYFDAERAGQVDMTAALRSPGSTLKPFIYGLGFEDGVVHPETLIDDRPVRY
                     GTYAPENFDLTFQGTVSVRKALQMSLNVPAVAVLDRVGAGRFTARLRQAGGAPVLPSG
                     EVPGLAMGLGGVGVRLADLVMLYAGLARLGTTVPLIEQPDAPSLASVDAGADARRLME
                     PVAAWYVSDVLRGTPPPENAPSGRIAFKTGTSYGYRDAWSVGFDGKRTIGVWVGRPDN
                     APVPGLVGRTAAAPILFDAFARSGKLPAPLPAPPRGALFASNAKLPPPLQRFRPGGFS
                     SALAQGSVEPPPRILFPANGARLELATGENGGIDPLALKISGGIAPLTVLINGAPLGS
                     AGPKRTVFFTPDGPGFVRLTVMDARGAADSVMVRLQ"
     gene            complement(2609..7816)
                     /locus_tag="VLJ17_19235"
     CDS             complement(2609..7816)
                     /locus_tag="VLJ17_19235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004866 - endopeptidase inhibitor activity
                     [Evidence IEA];
                     GO_process: GO:0010951 - negative regulation of
                     endopeptidase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-2-macroglobulin"
                     /protein_id="HSV25152.1"
                     /translation="MLTQLRAGLTAALVILSSYTACAADKPYHRDDLAEAALRLEAQI
                     KADAGPVTKPLATLRREADAAFARNDQRAGLQALGQIVAVAPGDTANWLRLARTILPI
                     RSSDARERATLLERATTAAYIAYRRAATGGEEADALVVLGRSFAERSLWRPALDVTRL
                     SLELREVADVRAQYEKMRDDHGFRLIDYSVDADSASPRICFQFSEALPSKRTDFSPFV
                     SVAGQDKLALSADDKQLCVEGLQHGERYAITMRAGLPSTVKEALAKTADFSIYVRDRS
                     PFVRFTSKAYVLPRTGQRGIPVVSVNTPSVAIKVYRIGDRNLLETVVGENFQRSLGRY
                     ELQRIADEHGVSVWSGQLKVESPLNAEVTTAFPVDEAIGDLTPGVYVMSAEAAGPKAN
                     DYVDLATQWFIVSDLGITAFSGHDGIHVFVNSLATATANAQTDIRLIARNNDVMATRR
                     TDASGHALFEPGLARGEGGLSPALLVASDPRGDYGFLSLKAPAFDFSDRGVTGRAVPA
                     GLDAFVYTERGVYRTGETVHVTALLRDPLGVAALNVPLTLVVERPDGVEYRRTVVADQ
                     GIGGRNLDVAIAPTASTGTWRVRAFSDPKRPAIGEASFMVEDYVPDRMEFDLASKATA
                     VARGKPFEVTVEGRFLYGAPASDLDISGNVKVHATSSHPGFAGYQFGNADDDEAKGAL
                     EQPLEDLPQTDATGKAKFEVTIDKLPATTRPMEAQVTVSMAEAGGRAIERKLTVPVTP
                     AAAMIGVKPLFAGASLGENENATFDVVVVAPDGKAASRTGLRYEILKIESRYQWYRQD
                     GSWNYEPIKQTKRVADGTLDVAANQPGRIAIPVTWGRYRLEVSSPDGSTATTAVGFDS
                     GFYAESSADTPDLLEIALDKPEYSPGESMTLAVTARTGGKVMLNVVADRLVATLSQNV
                     QPGLNQIHVPVGRDWGNGGYVVATLLRPLDVQAQRMPGRAIGVQWFSVDRKAKTLAVN
                     LALPALSRPSQTLRVPVKIDGLAGQEARLVVAAVDVGILNLTNYKPPAPDDYFLGQRR
                     LIAEVRDLYGQLIDGMQATRGQIRSGGDSGAAELQGSPPTQPPVTLYSGIVTVNRDGT
                     AEVTFDIPEFAGTVRVMAVAWSRDKVGRAVGDVTVRDPVVVTATLPRFILVGDRTTMQ
                     LDLDNVEGPAGDYRVTVVADGPMRLGTGAPQTVQLRARQRNRLAIPLAASAAGVANLT
                     VRIAGPENFALDRNYVLAAKPATQVLTRRTVRTIAAGESLTLSGDLFSDLVAGTGSVA
                     LSVGPSTALDAATLLKALDRYPFGCSEQITSRALPLLYVNELASEAHLALDTAVDQRV
                     RDAIERLLARQGANGSFGLWSVGGDDVWLDNYVTDFLTRARERGFAVPDAGFRLAIDR
                     LRNFVATAPEPGKDGGRDLAYALYVLARNGAAPVGDLRYIADTKLGDVATPIAKAQIA
                     AALGLLGDRLRAERVYAGALESLVPPRFEFGRQDYGSTLRDAAAVVMLAAEGNAPQPT
                     ITTAMQKVEAAREAVVRTSTQENAWMVLAARAIGKQARVSLDVGGEARQSPLYRTVQA
                     SQLQVSPLKVTNTGDAELRAVVSVNGAPVTPEPAADKGFKIERFYYTLDGKPADPAKA
                     RQNQRFAVVIKVTEPTPQYGRVIVADYLPAGFEIDNPRLVSSGDTGTLGWITDAVEPV
                     YSEFRDDHFGAAFDRDSKSPAVFTVAYVVRAVSPGTYVLPQAYVEDMYRPDRYGRTYT
                     GAVAIAPAR"
     gene            8009..9061
                     /locus_tag="VLJ17_19240"
     CDS             8009..9061
                     /locus_tag="VLJ17_19240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacid dehydrogenase"
                     /protein_id="HSV25153.1"
                     /translation="MSVNTKRVFYVKYLADPVYAEILGRRDDVRLDRLENESPDDVAG
                     PILAAAHVYQVGSARDEIARTFHVDAALIARMPAVLVVSTSGVGYDTVDVKACTDAGI
                     LVVNQAGGNREAVAEHALGMLVTLSKRIAETNQVMRRERLVDRVAYMGNDVFGKTIGI
                     IGVGNVGSRLAQLCRGLFAMQVLAYDPYLTAAVCAERGAEKVELDELLRRSDYVSINC
                     PLTAETRGMVGAAQFALMRPGAFLITTARGHIHDEAALADALRRKQLAGAGLDVWATE
                     PPPCDHPLLRFDNVLVSPHTAGVTRETRFNMGKIAAEQVLDALDGKPVARKVNPQVWP
                     VYAQRFARQFGFKPQE"
     gene            complement(9075..9809)
                     /locus_tag="VLJ17_19245"
     CDS             complement(9075..9809)
                     /locus_tag="VLJ17_19245"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HSV25154.1"
                     /translation="MLVGTKVTLGAFVPDDYPAMYCWANDVAAARFDGAFRPVNLTDV
                     LQLCDTAGKDPSRVLLAIRRRNEPRIIGYLHIQNISAVHRSADISIRIGQEQYRGQGY
                     GQEAMTMGLHYCWQHLNLQRVSLIVFRNNARAINAYRAAGFKKEGLLKKLLFIDGAWV
                     DVLLMAVFRPSRRPDGSRTNTDQTCLRAGAPSARLCNVSRVDARSNLGGPCEAGGVSP
                     PRPASSLGAGQSDPERPGVDEVLAAA"
     gene            complement(9891..10301)
                     /locus_tag="VLJ17_19250"
     CDS             complement(9891..10301)
                     /locus_tag="VLJ17_19250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25155.1"
                     /translation="MSVSGISTVPTNNYQSSGAPSEFQRDFRALVRSLKSGDLSGAQQ
                     AYKALSQLPDGGQGPSANSNSRFSQALNQIGQALQNGDLSGAQQALSSLQQARGHHHH
                     GQHGGGESTTSASTTPPSSSASLTAAANELNITA"
     gene            complement(11525..14653)
                     /locus_tag="VLJ17_19255"
     CDS             complement(11525..14653)
                     /locus_tag="VLJ17_19255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSV25156.1"
                     /translation="MNISEPFIRRPVATSLLMAAIGFVGLVAYPFLPVAPLPQVDFPT
                     ISVSATLHGASAETMAASVAAPLERQFGQIAGVTQMTSVSTEGATSVVIQFDLNRNID
                     SAAQDVQAAITVAGKTLPQQMTTPPSYKKTNPADSAIMILAAQSDTLPLYIVDDYVDN
                     FLAQQISQVPGVAQVSIGGEQKAAIRVQVDPAKLASSGVTLEEVRSTLVGQTTIAAKG
                     TVHTPKTSFTIAANDQITDAELFNDIVLAYRNGGPIRVRDVGQAIAAEADRTIAGYQN
                     NRLGIQLDVFKQPGANVIEIVDRIKEALPHLTANIPPAITITTLFDRTTTIRASVEDV
                     EFTLGLTIVLVILVILLFLRNVWATVIPGVTVPLALLGSFATMYLLNFSLDNISLMAL
                     TISVGFVVDDAIVVVENIYRHIENGESPFEAALNGSREIGFTVLSISFSLVAVFIPLL
                     LMGGIIGRLFREFALTVTASIAVSALVSLTLAPMLCARFMQPHSHDPGPIFAAIERGF
                     DALLSVYRRTLDIVLHHQAATLGVFFATMALTGLMMYQIPKGFFPIQDIGLINGIAEA
                     AQGVSPEEMKRLQLELGEVILRDPDVAAFRSSMGTTGTSAQTGNTGRFNITLKPREQR
                     EHSASQIIDRLRPQLAKVTGVNLFLQPAQDITVGGRIARAAFQYTLQDPNIDELVEWS
                     QKMLDKMRTLPEIVDVASDLLARAPQLKITINRDQAARFGISAQAIDDTLNDAYGQRQ
                     ITQYFTQLNTYWIILEILPELQASLGSLDRIYVKSPLTGAAVPLSALVDVDSQKIGPL
                     SVNHQGQFPSATLTFNLRAGVALGQAVDAINKAAHDIGMPNAVLGSFQGNAQAFQSSL
                     KSEPALIAAALVVVYIILGMLYESFIHPLTILSTLPSAGIGALLALQLGHMDLSVIGI
                     IGIILLIGIVKKNGIMLVDFAIVAEHERNLQPLAAIREACLLRFRPILMTTAAAMLAG
                     LPMMFGHGTGSEMRHPLGYSMVGGLALSQILTLYTTPVVYLYLARLQAWVQGKTVQQT
                     PPAEKVHAVAAE"
     gene            complement(14650..15813)
                     /locus_tag="VLJ17_19260"
     CDS             complement(14650..15813)
                     /locus_tag="VLJ17_19260"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSV25157.1"
                     /translation="MLRDRRVVLYCAVVIAVGGAGAWYLQPGPDPVRAARSSVPPAVP
                     VIVATATKRDLPIYLTGLGSVQASFTVGIRPQVDGKLEAVLFTEGQQVKKGDVLARID
                     PRLYLAALDQAKAKRMQNEAQLGAAQKDLSRSRTLVDKSFQTQQVVDQQQSKVDQLIA
                     SLNADDAAIETAQAQLDYTLITAPSDGRMGVRNIDPGNIVRASDSAPIATLTLTKPAA
                     VLFTLSARALNEVRDAMVRGPVEVTAFSQDNARVLSKGTLLLIDNFVDQASATMRLKA
                     VFSNEDEQLWPGDFVNARVSLEVRRDVVTIPSAAVQRGPDGIFTWVVAPTDTVEVRTI
                     TSGPTTGDLTIVASGLADGERVVIDGQYKLRPNARVVVNPSRGSAIAKRDRAL"
     gene            16133..17581
                     /locus_tag="VLJ17_19265"
     CDS             16133..17581
                     /locus_tag="VLJ17_19265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HSV25158.1"
                     /translation="MTQKNWSPLLAVAPLAVAFGVPALGADMAVKAPPSPMTPPYLWT
                     GWYVGANAGYGVGQSQGNYSFGPGAPGPGIETFNAMPGGGFGGGQLGYNYQINNIALG
                     NFLINGIVLGFETDIQGAGISDTRTCLLNCLGGTSALIDQRLNWFGTTRARVGVATGP
                     VLAYVTGGVAYGGTETGVTTTVGGATGSSITSAVKSGWTWGTGVEAALGGNWTAKVEY
                     LYVDLGSSSASSSVPAGASTLSVKHQEQMFRGGVNYRFGPDQSAAMRPTYNWAGLFVG
                     GTFGAGIGRNDSTFVIPAANAEAFFLSPRGFNGGGIIAYNWQFGSWVVGVDADFQGST
                     GSGYLTCAAVCSGTSATTIDQTLSWFGTARGRLGYAVGPALFYATGGAAYGEIKESFT
                     QSAAGTTISPSFSHSKSGFAVGGGIESKLDIFGLLGPNWMTRTEYLYIDLGSVSDIFT
                     NPSVAGGAAQVLTSNVHEHILRTVVSYKFGAP"
     gene            17923..17998
                     /locus_tag="VLJ17_19270"
     tRNA            17923..17998
                     /locus_tag="VLJ17_19270"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:17956..17958,aa:Arg,seq:tct)
BASE COUNT         3484 a         5563 c         5616 g         3335 t
ORIGIN      
        1 cgccaaaccg tcgagaccag cgcagcgggc ccggattttc catgacggga agatcgccgc
       61 atttgtgact gccccggtta ctaggaaagc gctcgatctt ggcctctatg tcgactcgct
      121 gacacaatcg cgcccaacga acttctcaat tcaaactgaa gttgccctga attgattcgg
      181 gggatcacga tggctgacgc caaaccgtct taccaatggc cggatagtgc ttcgcaacat
      241 tccaattctc attctctatc ggacgaattg cagctgctcc gtgaggaaac caaacgcctg
      301 agagagctgg tcattcagct ttccaagatc gccatcaaga gtgccattga cgcgaaatag
      361 cgcgtccacg cgctggtggt ggggtttaca ccgaacggtc ctaaccccgc ccgcggcgcc
      421 tgcataggat ctcaagctac tgcagccgca ccatcacgct atcggctgcg cccctggcgt
      481 ccatcacggt gaggcgcacg aatcccgggc catccggcgt gaagaagaca gtgcgctttg
      541 gaccagcact gccgagcggc gctccgttga tcagcacggt caggggcgcg atacctccgg
      601 agatcttcag cgctagcgga tcgatcccgc cgttctcgcc ggtggcgagt tcgagccgcg
      661 cgccattagc tgggaagagg atgcgcggtg gcggctcgac acttccttgc gccaacgcgc
      721 ttgagaagcc acccggccgg aaccgctgca gcggcggcgg cagcttggcg ttgctggcaa
      781 acaacgcgcc gcgcggcggg gccggcaatg gggcgggtag cttgccggag cgcgcaaaag
      841 cgtcgaacag gatcggcgct gccgcggtgc gcccgaccag tcccggcacg ggcgcgttgt
      901 cgggccggcc gacccacacc ccgatggtgc gcttgccgtc gaagccgacc gaccaagcat
      961 cgcgatagcc gtagctcgtc ccggtcttga acgcgatacg gccgctcgga gcattttcag
     1021 gcggcggggt gccgcgcaag acatcgctca cataccaggc tgcgaccggc tccatcagcc
     1081 gtcgtgcatc cgcccccgcg tcgacactcg cgagcgaagg ggcatccggc tgctcgatca
     1141 acggcaccgt ggtgcctagt cgcgccaagc cggcatacag cattacgaga tcggcgagcc
     1201 gcaccccgac gccaccgaga cccatggcga gccccggaac ctcaccgctc ggcaagaccg
     1261 gcgctccacc cgcttgacgc aatcgcgccg tgaaccgccc cgcgccgacc cggtcgagca
     1321 ccgcgaccgc gggcacgttg agcgacatct gcagcgcttt gcgcaccgat accgtgccct
     1381 gaaacgtgag atcgaagttt tccggcgcat atgtgccgta gcgcaccggg cgatcatcga
     1441 tcagggtctc agggtggacg acgccatcct caaatccgag cccgtagatg aacggcttga
     1501 gggtcgagcc gggcgaccgc agcgccgccg tcatgtcgac ctgaccggca cgctcggcgt
     1561 cgaaataatc ggcggagcca acccgcgcga gcacctcgct ggtctgatga tcaaccgcaa
     1621 ggattgcgac cgaaatattc ggccccagcg cgcgtgcgcg ttctcgcgcc agtccctcaa
     1681 ggctcgcctg ccatggtgca tcgatggtca ggcgcaccag cgatcggccc ggcgatgccg
     1741 cgactgcatc gtccgcggcg tgcggcgcca gtgtcggcat cggcttgcgc gccgccggca
     1801 ccggctcggc tttggcgcgc aatatttcgg cggtctcgaa gatgccagcg gtggcgacgc
     1861 gatcgagcac gcggtcgcgc gcgcgcgtcg ccgccgttat tgagcgatcc ggacggcgcg
     1921 cttgcggcga ttgcggcagt gcgaccagca aggctgcttc gccgagcgtc agtcgctttg
     1981 gctccttgcc gaaataggcc agcgcggcgg cgcgaacgcc ttcgaggttg ccgccgtaag
     2041 gggcaagaca cagataaagc gtgagcactt cgtccttggt gagctgtcgc tcgatctcca
     2101 cagcgcgagc gagctggcgt aatttggcgg cgagcgagcg ctcggtgcgc ggttccagca
     2161 gccgcgccac ctgcatggta agggtcgagc cgcccgacag gatgcggccg tgggtcaaga
     2221 cctgcgcgcc ggcgcgcagc aaggcaagcg gatcgacgcc ggaatgcttg cgaaatcgct
     2281 tgtcctcata tgcgatcagc agttccagat agcggggatc cacactgtcc gcgcgcgccg
     2341 ggaggcgcca gcgtccatca ctggtcgcat acggccgcag cagccgccct tcgcgatcga
     2401 ccacggtggt ggagaattcg aggccctcgc caagtggcgc cgggccaagc gagacgaccc
     2461 aaagcaaggc cgcgcctgtt gcgaccagga tcgccgccgc aaaagaagcc gcaacgaccg
     2521 taaacagcgg tctcttcccc ccttcccctt gtgagggaga agaccgcgct tcgggagact
     2581 gcaacccact catgaccgct ccctggcctc accgcgcagg cgcgatggcg accgctccgg
     2641 tgtaggtgcg gccataacgg tcgggacgat acatatcctc cacataagcc tgaggcagca
     2701 cataggtgcc gggcgacacc gcacgcacca cgtaggcgac ggtgaatacc gcgggcgact
     2761 tgctgtcgcg atcgaacgcc gcgccaaaat ggtcatcgcg gaattccgaa tagaccggct
     2821 cgacggcatc cgtaatccaa cccagtgtcc cggtgtcgcc tgatgacacc agccgtggat
     2881 tgtcgatctc gaatcctgcc ggcagatagt ccgcgacgat gacgcggccg tattgcggcg
     2941 tcggttcagt taccttgatg accaccgcaa aacgctggtt ctgccgcgct ttggcggggt
     3001 cggccggctt gccatccagg gtgtagtaga accgctcgat cttgaagccc ttgtcggccg
     3061 cgggctccgg cgttacaggc gctccgttga cagatacgac ggcgcgcagc tccgcgtcac
     3121 cggtgttggt caccttgagt gggctcacct gcaattggct agcctgcacg gtgcggtaaa
     3181 gtgggctctg ccgcgcctcg ccgccgacat cgagcgatac gcgggcctgc ttgccgatgg
     3241 cgcgggcggc caggaccatc caggcattct cctgggtgga cgtacggacc accgcctcgc
     3301 gcgcggcctc gaccttctgc atggcggtcg tgatcgtcgg ctgcggcgcg ttgccttccg
     3361 ccgccagcat gacgactgcc gccgcgtcgc gcagcgttga gccgtaatcc tggcgtccaa
     3421 actcgaaccg tggcggcacc agtgattcga gcgcgccagc gtaaacgcgc tccgcccgca
     3481 ggcggtcacc gagcaggccg agcgctgcgg caatctgcgc cttggcgatt ggggtcgcaa
     3541 cgtcaccgag cttggtgtcg gcgatgtaac gcagatcgcc gaccggggcg gcgccattac
     3601 gcgccagcac gtagagcgcg taagcaagat cgcgtccgcc gtccttgccg ggctcgggcg
     3661 cagtggcgac aaaattgcgc agccggtcga tcgcaagccg gaagcccgcg tccggcaccg
     3721 caaatccgcg ctcgcgcgcc cgcgtcagga agtccgtgac atagttgtcg agccagacat
     3781 cgtcgccgcc gaccgaccat agaccgaacg aaccgtttgc gccctgccgg gccagcaatc
     3841 gctcaatcgc atcacgaacg cgctgatcga ccgcggtatc gagggcaaga tgcgcttcgc
     3901 tcgcaagctc gttgacatag agcagtggca gcgcgcggct tgtgatctgc tccgagcatc
     3961 cgaacggata gcggtcaagg gccttgagca acgtcgcggc gtcgagcgcg gtcgacgggc
     4021 cgaccgagag cgcgacgctg ccggtcccgg ccacgaggtc ggagaacaga tcgcccgaca
     4081 gcgtcaggct ctcgcccgcc gcgatggttc gtaccgttcg tcgcgtcagc acctgggttg
     4141 cgggctttgc ggcgaggacg tagttgcgat cgagcgcgaa gttttcaggc cccgcgatcc
     4201 gtaccgtgag attggcgaca ccagccgccg atgccgccag tggaatcgca agccggttgc
     4261 gttgcctggc acgcaattgc accgtctgag gtgcgccggt gccgagacgc atcggcccgt
     4321 cggccacgac cgtaacccga taatctccgg ccggcccttc cacgttatcg agatcaagct
     4381 gcatagtggt gcggtcgccg accaggatga agcgcggcag cgtcgcggtg acgaccaccg
     4441 gatcgcgcac cgtcacgtcg ccaacagcgc ggccgacctt gtccctcgac cacgccaccg
     4501 ccatcaccct tacggtgccg gcgaattccg ggatgtcgaa ggtcacttcc gcggtgccgt
     4561 cgcggttgac ggtaacgatg cctgagtaaa gcgtgaccgg cggctgggtc ggcgggctgc
     4621 cctgcagctc tgccgcgccg ctgtcgccgc ccgaacggat ctggccgcgc gtcgcctgca
     4681 tgccgtctat gagttggccg tacagatccc gcacttccgc aatcaggcgg cgctggccca
     4741 ggaagtagtc gtccggcgcc ggcggcttgt agttggtgag gttgagaatt ccgacgtcga
     4801 ctgccgccac caccagcctc gcctcctgtc cagcgaggcc atcgatcttg accggcacgc
     4861 gcagcgtttg gctcggccgc gacagcgctg gaagcgcaag attgaccgca agggtcttcg
     4921 ccttgcgatc gacggagaac cactgcaccc cgatggctcg cccgggcata cgctgggctt
     4981 gcacatcgag cggccgcaac agcgttgcca ccacatatcc gccgttgccc caatctcgtc
     5041 cgaccggaac gtggatctga ttgaggcccg gctgcacatt ctgactgagg gtcgcgacca
     5101 gccggtcggc gacgacattg agcatcactt ttccaccggt ccgcgccgtc acggcaagcg
     5161 tcatgctctc gcccgggctg tattcgggct tgtcgagcgc tatctcgagc aggtcgggcg
     5221 tatcggcgct ggactcggca taaaaaccgg aatcgaaacc gaccgccgtc gttgcggtgc
     5281 tgccatccgg gctcgatact tcgaggcgat agcgacccca cgtgaccgga atcgcaatgc
     5341 ggcccggctg attagcggca acatcaagcg tgccgtcggc aactcgcttg gtttgcttga
     5401 tgggttcgta gttccagctg ccgtcctgtc ggtaccattg gtagcggctt tcgatcttga
     5461 gaatttcgta gcgcagaccc gtacgcgaag ccgctttgcc gtccggcgcc accaccacca
     5521 cgtcaaaggt cgcattctca ttttcgccga gcgaagcgcc cgcgaatagc ggcttgaccc
     5581 cgatcatggc ggcggctggc gtcaccggca cggtgagctt gcgctcgatg gcgcggccgc
     5641 cggcttctgc catgctgacc gtcacctgcg cctccatcgg gcgggtcgtc gccggcaatt
     5701 tatcgatggt gacttcgaat tttgccttgc cggtcgcgtc ggtctgcggg agatcctcga
     5761 gcggctgctc gagcgcacct ttagcctcgt cgtcatccgc gttgccgaac tgatagccgg
     5821 caaatccagg gtggctggag gttgcgtgaa ccttcacgtt gccgctaatg tccagatcgc
     5881 ttgcgggcgc gccgtaaagg aagcggccct cgaccgtcac ttcgaacggc ttgcccctgg
     5941 cgaccgccgt ggctttgctg gcgagatcga actccatgcg gtcagggacg tagtcctcaa
     6001 ccatgaagct cgcctcgccg atcgccggac gtttgggatc gctgaaagcg cgcacgcgcc
     6061 aagtgccggt cgatgcggtc ggcgcaatgg caacgtcgag attgcgcccg ccgatgccct
     6121 gatcggccac cacggtgcgg cgatattcga caccatccgg ccgctcgacc actagggtca
     6181 gcggcacatt gagcgccgcc accccgagcg gatcgcgcag cagcgccgtg acgtgtacgg
     6241 tttcgccggt gcgatagacg ccgcgctcgg tgtagacgaa ggcatcgagc cccgccggta
     6301 cagcgcgacc cgtgacgccg cggtcgctga aatcgaacgc cggcgccttg agactcaaga
     6361 acccgtagtc gccgcgcgga tcggacgcca ccaacaaggc cggcgaaagt ccgccctccc
     6421 cgcgcgcgag gccaggttcg aacagcgcat ggccggaggc atcggtgcgc cgcgtcgcca
     6481 tcacgtcgtt gttgcgggcg atcagccgga tatcggtctg ggcgttggcg gttgcggtcg
     6541 cgagcgaatt gacgaagacg tggataccgt catggcccga aaaggccgtg atcccgagat
     6601 cagagacgat gaaccattgg gtggcaaggt ccacgtagtc gttcgccttc ggccctgcag
     6661 cctccgcgga catcacatag acgccgggag taaggtcgcc gatcgcctca tcgaccggga
     6721 aagcggtcgt cacctcggca ttgagcggac tttcgacctt gagttggccg ctccacaccg
     6781 aaacgccgtg ttcgtcggca atccgctgca attcgtagcg gccaaggctg cgctggaaat
     6841 tttcgcccac cacggtttcg agcaaatttc gatcgccgat ccggtagacc ttgatggcaa
     6901 cacttggagt gttgacgctc accaccggaa tgccgcgctg tccggtgcgt ggcagcacat
     6961 aggctttgct ggtgaagcgc acgaacgggc tgcggtcgcg cacataaatc gaaaagtccg
     7021 cggtcttagc gagggcttcc ttgacggtcg agggcaggcc ggcgcgcatc gtaatggcat
     7081 agcgttcacc gtgctgcagc ccttcgacgc aaagctgctt gtcatctgcg gacaaggcca
     7141 gcttgtcctg accggcgacg ctgacaaatg gcgagaaatc ggtgcgcttg ctcggcaatg
     7201 cctcggagaa ctggaagcaa atgcgcggcg aggcactatc ggcgtcaacc gagtaatcga
     7261 tgagccggaa gccgtggtcg tcgcgcattt tttcatattg ggcgcgaacg tctgcgacct
     7321 cacgcagctc aagcgacaaa cgcgtgacat cgagcgccgg gcgccacaag gagcgctccg
     7381 caaagctgcg cccgagaacc acaagcgcgt cggcctcttc gccgccagta gccgcgcgcc
     7441 gataggcgat gtaggcagcc gtggttgcgc gctcaagcag cgtcgcacgc tcgcgggcat
     7501 cgctcgacct gatcggcagg atggtcctcg ccagccgcag ccagttggcg gtatcgccag
     7561 gtgccacggc gacgatctgc ccgagcgcct gaaggccggc ccgctggtca ttacgggcga
     7621 atgccgcatc ggcctcgcgg cgcagcgtcg ctaaaggttt cgtcaccggc ccggcatcgg
     7681 ccttgatctg ggcctccagg cggagcgccg cttctgcgag atcgtcgcgg tgatagggtt
     7741 tgtcggcggc gcaggcagta tacgatgaaa gaatcacgag cgccgccgtg aggccggcgc
     7801 gcagctgcgt cagcatttta gagacctcct tgccgggcca tgccgggact gcgatccacc
     7861 gcttatcacg cgaatggaac atcgtgtcga gcccgtgacc aaggtgaagc atcagtcaag
     7921 attgtcacaa cagcgcaaat ttcggctaga acgcgcaccg cgcagcacaa atccgtcgcg
     7981 accggcgtga cagaaaggcc cccgatccgt gtccgtgaat acaaaacgcg ttttctacgt
     8041 gaaatacctc gctgatccgg tttatgcgga aattctcggg cgtcgcgacg atgtgcggct
     8101 cgaccggctc gaaaacgaaa gcccggatga cgtggccggc ccgatccttg ccgcggccca
     8161 tgtctaccag gtcggctcgg cacgcgacga aattgcgcgg acgtttcacg tcgatgcggc
     8221 gctgatcgcg cgtatgccgg ccgtactcgt ggtttcgacg agcggcgtcg gctacgacac
     8281 ggtcgacgtc aaggcttgca ccgatgccgg catcctagtg gtgaaccaag cgggcggtaa
     8341 tcgcgaggcc gtcgccgagc atgcgctcgg tatgctggtc acgctttcta agcgcattgc
     8401 ggaaaccaat caggtgatgc gacgcgagcg cctcgttgat cgggtcgcct atatgggcaa
     8461 cgacgtgttc ggcaagacca tcggcatcat cggggtcggc aatgtcggca gccgcctggc
     8521 gcaactgtgc cgcggcctgt tcgccatgca ggtgctggcc tatgacccct atctgacggc
     8581 cgcggtgtgc gccgagcgtg gcgccgaaaa ggtagaactc gacgaactcc tgcgccgcag
     8641 cgactacgtg tccatcaact gcccgctcac ggcggagacc cgcggcatgg tgggagccgc
     8701 gcagttcgcc ctgatgcggc cgggcgcctt tctcatcacc acggcacgcg gacacattca
     8761 tgatgaggcg gcgctggccg acgccctgcg gcgcaagcag ctggccggcg ccggtcttga
     8821 cgtgtgggcg accgagccgc cgccttgtga ccatcctttg ctgagattcg acaatgtgct
     8881 ggtcagcccg cacaccgccg gcgtcacccg ggagacgcga ttcaacatgg gcaagatcgc
     8941 cgccgagcag gtgctcgatg cgctcgacgg caagccggtg gcgcgcaagg tcaatccgca
     9001 ggtgtggccg gtctatgcgc agcgctttgc gcggcagttc ggatttaagc cacaggaata
     9061 gccgccactt ctccttacgc tgccgccagg acctcatcga cccccggacg ttcgggatcg
     9121 ctctgccctg cgccgaggct tgaggctggg cgcggtggag atacaccacc ggcctcgcac
     9181 ggccccccaa gatttgaccg ggcgtccacc cgcgaaacat tacacagccg agcagatgga
     9241 gcccccgccc tcaggcatgt ttggtcggtg ttggtacggc ttccatctgg ccgccgggac
     9301 ggacggaata ctgccatcag cagcacgtca acccaggcac cgtcgatgaa tagaagcttt
     9361 ttgagaagcc cttccttctt aaatcccgcg gcccgataag cattgatggc tctggcgttg
     9421 ttgcgaaaca cgataaggga gacccgttgt aggttcagat gctgccagca atagtgcaac
     9481 cccatcgtca tggcttcctg gccgtaaccc tgtccgcgat attgttcttg gcctattcta
     9541 atgctgatgt cggcggaacg gtgcacggcg ctgatgttct gaatgtggag atagccgatg
     9601 atccgtggct cgttgcgccg gcggatcgcc aacaacaccc tggacgggtc tttgccggcc
     9661 gtatcgcaca gctgcagtac atccgtaagg ttgaccggcc ggaacgcgcc atcgaagcgc
     9721 gcagcagcga catcgttcgc ccaacaatac atcgccggat aatcgtcggg aacgaatgcc
     9781 ccgagggtga ccttggttcc aacgagcatg cgtgcctctt tcggctatga ccggtgacat
     9841 gcaaaggtcg gccggacaat cgttgccgtg ccgaccatgc acagaggact tcatgcggtg
     9901 atgttcaatt cgttagcagc ggcggttaag gaggcggacg aagatggagg cgtcgtgctg
     9961 gccgaggtgg tgctctctcc gccgccgtgc tgcccgtgat gatggtggcc tcgcgcttgc
    10021 tgaagtgacg aaagcgcctg ctgcgccccg gacaaatcgc cgttctgcag cgcttgccca
    10081 atctggttca gcgcctggga gaatcgactg ttagaatttg ccgatggccc ttggccgcca
    10141 tctggaagct ggctcagcgc cttgtaggct tgctgcgcac cggacagatc tcccgatttg
    10201 agggagcgta caagcgcgcg gaaatcccgt tgaaattccg acggcgcgcc ggaggattga
    10261 taattgttgg tggggacagt ggaaattccg gaaacagaca tgatgtttct cctgcgaggt
    10321 gaaagacctc tggttcaaca tcgccccaca ggcgttatgg gcgaaagttt gctaacaatt
    10381 agtaatcacg gtgacgtctc tgacggcggc tagttgtttt cgatcctgca tctgcggatg
    10441 cgaaaggttc gacgatacga atgatgcgaa gtgcgatttg accagccata ataacgaata
    10501 caaagcttct gcttacgaag cagaacctac cacctgctct caacctgcat caatattacc
    10561 aaaatttaat ctgccggtca gaatatcgaa tggcggtatt ttctatgcgt ttcatgactc
    10621 caattcaatg tgttttcaaa attggaatgg cgttcgctcg taatggcatt tttgttaggc
    10681 aaacaaaaag gagatggtag aatgagaatt cttatggcag cgctaatcat cacattcctg
    10741 gctggcgcag ccaacgttca aaaaggcagg caaggggcgc aacgcgccac aaaatgctga
    10801 acagcaaaaa gccgaacagc aaaagaaaaa agctatcgat gatgcctaca aatctgcact
    10861 tggatagatt cccgagccca aggacaaata cgatccatgg cggaacgcgc gctagagccg
    10921 gtcatacgga gcgaatcgtg gggtgggcaa agcgaagtat gcccaccgag gtcacagccg
    10981 catgagcatg gcgcgacaag cgcctttgtg tcggcatctc cggtattgat cttgctctcg
    11041 tgcttaaccg caggcggctg tgccgggctc cttgcgagcg acgcgctgcc gccacgggtg
    11101 atgctaccgc cgccagaagg gaagaaactc gccgaactcg tcggcaccgc cttcaagacc
    11161 gcaaagcttc ctggcgctcc ggaggtatca ctggtacgtg ccacccacga tgcccaatgg
    11221 ggcgattggg ttttctgcat aaaaagtaac agctcagagg agtcaccgaa atatgcagtc
    11281 ttgacaaccg ataacaccat tttggaggtc agatccgctg tcttgatcga tggttgcgac
    11341 aaggaaacct accatcctat cgaaatcaca ggtcaacctg gcgatgtaaa ggacagccct
    11401 gggaatccac ctccccgttc tagtcgtcag catcggacac gagcgccctg agaaccttgg
    11461 gctcggatcg atcgccgggc ctgtttgcgt cgacctttcg aaggtaacgt cgaggctggc
    11521 caattcactc cgctgcgacg gcgtggacct tctcggcagg cggcgtctgc tggaccgtct
    11581 tgccctgcac ccaagcctgc agccgggcga ggtagagata gaccaccggg gtcgtgtaga
    11641 gcgtcaaaat ctggctgagc gccagtccgc cgaccatcga atagcctagc ggatggcgca
    11701 tttccgaacc tgtgccgtgg ccgaacatca tcggcagccc ggccaacatc gcggccgccg
    11761 tggtcatcag gattgggcga aaccgcaaca ggcaggcttc gcggatcgcc gcaagcggct
    11821 gcaggttgcg ttcgtgctcg gccacgattg cgaaatcgac cagcatgatg ccgtttttct
    11881 tgacgatccc gatcagcagg atgatgccaa tgatgccgat caccgacaga tccatgtgcc
    11941 cgagttgtaa ggccagcaac gcgccgatgc cggccgacgg cagcgtcgaa agaatggtca
    12001 gcgggtgaat gaaactctca taaagcatac ccaaaatgat gtagacgacc acgagcgccg
    12061 cggcgatcag ggcgggctcg ctctttaacg acgattgaaa cgcctgggcg ttaccctgga
    12121 acgagccgag caccgcattc ggcatgccga tgtcgtgcgc cgccttgttg atggcatcga
    12181 cggcctggcc gagcgccacg ccagcccgta aattgaaggt caacgtcgcc gatgggaatt
    12241 gcccctgatg gttgacggat agcggtccga tcttttgcga atccacatcg accaaggccg
    12301 atagcggcac cgccgcgcca gtcaatggcg atttcacata gatgcgatcg agggatccaa
    12361 ggctcgcctg cagctcgggg aggatttcga gaataatcca ataggtgttg agctgggtga
    12421 aatattgggt gatctggcgc tgcccatagg cgtcattgag ggtatcgtcg atggcttgcg
    12481 cggaaatccc gaatctggcg gcttggtcgc gattaatggt gatcttgagc tgcggggccc
    12541 gcgccaagag atcgctcgcg acgtcgacga tctcgggcag cgtgcgcatc ttgtcgagca
    12601 ttttttgcga ccattcgacg agttcatcga tgttcggatc ctgtaacgta tactggaagg
    12661 cggcccgcgc gatccggccg ccgaccgtaa tgtcctgtgc gggttggagg aatagattca
    12721 cgccggtgac cttggcgagc tgcgggcgca ggcggtcgat gatctgcgag gcactatgct
    12781 cgcgctgttc gcgtggcttg agggtaatat tgaaacggcc ggtgtttcca gtttgcgcac
    12841 tggtgccggt cgtccccatt gacgatctga acgccgccac gtcgggatcg cgcaggatca
    12901 cttcgccgag ttctaattgc agccgcttca tctcctcggg cgacacgccc tgagcggcct
    12961 cggcgattcc gttgatcagc ccgatatcct gaatcggaaa aaatcctttg ggaatttgat
    13021 acatcatgag gccggtcaag gccatggtgg cgaaaaagac gccgagcgtc gccgcttggt
    13081 gatgcagcac aatgtcgagg gtacgccgat agaccgacag aagggcgtcg aagccacgct
    13141 cgatggcagc aaagatgggg ccaggatcgt gggaatgtgg ctgcatgaaa cgcgcacaca
    13201 acatcggcgc gagcgtcagt gagaccaacg ccgacactgc gatggacgct gtgaccgtca
    13261 aggcgaactc gcggaacagc cgaccgatga ttccgcccat caacagcagc ggaatgaaga
    13321 cagcgaccag cgaaaagctg atcgatagca ccgtgaagcc gatttctcgc gaaccgttga
    13381 gcgcggcttc aaatggcgac tcgccgtttt cgatatggcg gtaaatattc tcgaccacca
    13441 caatggcgtc atcgaccacg aacccgaccg agatggtcag cgccatcaat gagatgttgt
    13501 cgagactgaa attgagaaga tacattgtgg caaaggagcc gagcagcgcc agcggaaccg
    13561 tgacgcccgg gattaccgtc gcccaaacat tgcgcaggaa cagcaagatc accaaaatca
    13621 ccagtacgat agtcaaacca agcgtgaact cgacatcttc caccgaagcg cggatcgtgg
    13681 tcgtccgatc gaacagcgtc gtgatcgtga tcgccggtgg gatattggcg gtcaggtgag
    13741 gcagcgcttc cttgatccga tcaacgatct cgatcacgtt ggcgcccggc tgtttgaata
    13801 catccaactg gatgccgagt ctgttgttct ggtagcccgc gatggtgcgg tcggcctccg
    13861 cggcaatggc ctgtccgaca tcacgaaccc tgatcggacc gccattgcga taggcaagaa
    13921 caatatcgtt aaagagctcc gcatcggtga tctgatcgtt agcggcaatc gtgaagctcg
    13981 tcttcggggt atgaacagtg ccctttgcgg caatcgtggt ttggccgacg agggtgctgc
    14041 gcacctcttc aagcgtcacg ccgcttgagg cgagcttggc cggatcgacc tgcacccgga
    14101 tcgcagcctt ttgttctccg ccgatgctga cctgagcaac gccgggcact tgggagattt
    14161 gctgggccaa aaaattgtcg acgtaatcgt cgacaatata gagcggcaac gtgtccgact
    14221 gcgccgccag gatcataatg gccgaatcgg ccggattggt cttcttgtag ctcggcggcg
    14281 tcgtcatctg ctgcggcaac gtcttgcctg ccaccgtgat cgccgcctgc acatcctggg
    14341 cagcggaatc gatgttacga ttgaggtcaa attggatgac gaccgacgtc gccccctccg
    14401 tgctcactga ggtcatctgc gtgaccccag cgatttgtcc gaactgacgc tccagcggtg
    14461 ccgcgaccga agccgccatg gtctcggcgc ttgcgccgtg caatgtggca ctgacgctga
    14521 tggtcgggaa gtcgacctgc ggcaagggag ccacgggtag gaatggatag gcgacgaggc
    14581 cgacgaatcc gatcgccgcc atcagcagtg atgtcgcgac cggccgccga atgaaaggct
    14641 cggagatatt cataacgcgc gatcccgctt ggcgatcgca gagcctcttg atgggtttac
    14701 gaccacgcgc gcattcgggc gcagcttata ttggccgtcg atgaccacac gttcgccgtc
    14761 ggccaatccg ctagccacaa tggtcagatc gccagtagtt ggtccggagg tgatcgttcg
    14821 gacctcaacc gtatccgtcg gcgcgacgac ccaggtgaaa attccgtctg gtccgcgctg
    14881 gacggcagcc gacggaatgg tcacgacatc gcgccgtacc tcgagcgaaa ccctcgcatt
    14941 cacgaaatcg cccggccata gctgctcatc ttcgttggag aacactgctt tgagccgcat
    15001 ggtggcactc gcctgatcga cgaaattgtc gatcaggaga agcgtgcctt tgctcaggac
    15061 gcgggcattg tcttggctga atgccgtcac ttccaccgga ccgcggacca tggcgtcgcg
    15121 cacctcattg agggcgcggg ccgacaaggt aaacagcact gcggccggct tggtcagcgt
    15181 caaagtggcg atcggcgccg aatcggaggc acgcacgata ttgccggggt cgatattgcg
    15241 cacgcccata cggccgtcgc tgggcgcggt gatcaaggta tagtcgagtt gcgcctgcgc
    15301 ggtctcgatc gccgcgtcgt cggcgttgag cgaagctatc agctgatcga ccttggactg
    15361 ttgctggtcg accacttgtt gcgtttgaaa actcttgtcc accaaggtcc gcgaacggga
    15421 caggtctttt tgcgctgcac cgagctgcgc ttcgttctgc atcctcttgg ccttggcctg
    15481 atcgagtgct gccaaataaa ggcgcgggtc gatcctggcc aggacatcgc ccttcttgac
    15541 ctgttggccc tcggtgaaca gcaccgcttc aagcttgccg tcgacctgcg gccggatgcc
    15601 gaccgtgaag gaggcctgca ccgaaccgag gccggtaaga tagatcggca ggtcacgttt
    15661 tgtggctgtc gcaacaatta ccggaacggc tgggggcacc gacgaccgcg cggcccgaac
    15721 cggatccggt cccggttgca gataccacgc tccagcacca ccgaccgcga tcacaacagc
    15781 gcaatacaga acaacgcgtc gatcgcgaag cacgttcatc cctcttgggc ggcttccgct
    15841 tactgagtca cggagcctgc aattttattt tgctatctcc cgttaatgta gcctaacccg
    15901 cgcgatacac aagtttcctg atacgatgct gccgatacgc tccccggtgt cgcccgcatc
    15961 ccccaagccg gtcaatcgat accgccaccg cttggtgaga aaatggccgg tgcggaaaat
    16021 gcgcgaaaga tttgcgttgt ggcgtaacgg caacagacag ggccatgccg ccatgcaagg
    16081 atgtcgaggc gtgatcaggc gcaatcaaag cagattcgga tttggtgttg aaatgacgca
    16141 aaaaaattgg agcccgctgc tcgccgtagc gccgctggct gtggcattcg gcgtgccggc
    16201 actgggcgcc gacatggccg tcaaggctcc gccatccccg atgacgccac cgtacctgtg
    16261 gaccggctgg tatgtcggcg cgaatgcggg ttacggcgtc ggacagagcc aaggcaatta
    16321 cagctttggt ccgggcgctc cgggccccgg tatcgagaca ttcaatgcca tgccgggcgg
    16381 cgggttcggc ggcggccagt tgggttacaa ttaccagatc aacaacatcg cgcttgggaa
    16441 tttcctgatc aacggcatcg tgctcggatt tgaaaccgac attcaaggag cgggcatttc
    16501 ggatacacgt acgtgcttgt tgaactgcct cggcggaaca tctgcgctga tcgaccagag
    16561 gctgaactgg tttggcacca cccgggcacg cgtgggagtg gcgaccggcc cggtgctggc
    16621 atacgtgacc ggcggcgtcg cttatggcgg cacggaaacc ggcgttacga cgactgtcgg
    16681 tggcgccacg ggctcatcga ttacctccgc ggtgaagagc ggttggactt ggggcaccgg
    16741 cgtcgaggcc gcgcttggtg gcaattggac ggcaaaggtt gagtatctct acgtcgatct
    16801 cggcagttcc tcggcctcaa gttcggtgcc cgcaggagcc agcaccctaa gtgtgaaaca
    16861 tcaggagcag atgtttcgcg gcggcgtgaa ttaccgtttt gggccagatc aatctgcggc
    16921 catgcggcct acctacaatt gggcggggct gtttgtgggc ggcaccttcg gggccgggat
    16981 aggccgcaac gacagcacgt ttgtgatccc ggccgccaac gcggaggcat tcttcctgtc
    17041 gccacgcggt ttcaacggcg gcggcatcat cgcctataat tggcagttcg gaagctgggt
    17101 ggtcggcgtt gacgccgatt tccagggcag caccggcagc ggctacctga cctgcgcggc
    17161 cgtctgcagc ggcaccagcg cgaccacgat cgatcagacg ctctcgtggt tcggcaccgc
    17221 gcgcggccgg ttgggctatg cggttggccc ggccctgttt tacgcaaccg gcggcgctgc
    17281 gtatggggaa atcaaggaga gcttcaccca gtccgcggct ggtacgacca tcagcccatc
    17341 gttctcccac agcaagtccg ggtttgcggt tggcggcggc atcgagagca agttggatat
    17401 ttttggcctg ctcggcccga actggatgac gcgaaccgag tatctctaca tagaccttgg
    17461 cagcgtcagc gacatattca ccaatccctc cgtcgccggt ggcgccgccc aagtactgac
    17521 cagcaatgtg cacgaacaca tcttgcgcac ggtggtgtcg tataagttcg gcgctccatg
    17581 aggaagcttt cgtcgccatc gcttcggaca gaaagctgga ttcttcgctc agaaaacctg
    17641 atgctggtga gaagccccgg cctcgcctcg ggggcttctt tcgtgttatt gtgccggaaa
    17701 ctgctcgagc gtaatccgac cgcagcttag ggcggatgcg ggatatgatt gaaccaagtt
    17761 ccccttggtc atgcccgcgc ctgtcgccgg catgcacgtc tttcttgctg aggttcagag
    17821 agcagggcgc gatggccgga acaagcccgg ccatggcttc cgtagaaatg gctcaaagtg
    17881 gtcgggacat gctctaagcg gcgaagtcga aacattctct acggccccgt agctcagcgg
    17941 atagagcaac agccttctaa gctgaaggtc gcaggttcga ttcctgccgg ggtcgcca
//
LOCUS       DATILV010000795        13545 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3004123, whole genome shotgun sequence.
ACCESSION   DATILV010000795 DATILV010000000
VERSION     DATILV010000795.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 13545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13545
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3004123"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(147..1820)
                     /gene="recN"
                     /locus_tag="VLJ17_19275"
     CDS             complement(147..1820)
                     /gene="recN"
                     /locus_tag="VLJ17_19275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018454248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HSV25159.1"
                     /translation="MLIRLSIRDIVLIDRLDIDFAAGLSVLTGETGAGKSILLDSFAL
                     ALGGRGDSDLVRQGAEQGQVTAAFDVPADHPAWAILKANDILADGDLILRRVQLADGR
                     TRAFLNDQPVAVQVLRSVGSALVEIHGQHDDRALVDTATHRQLLDAYGGLETEAAEVA
                     RLWTIRRDAEQQVVRHRTEVERAQREADWLRHAAAELTQLAPEPGEETALAERRTGMM
                     QAEKVAEDLREAHTVVSGSGSPVPALAAAVRRLERRSAQAPGFIDPAVKALDAALMAL
                     DEASHHIDRALATAAFDPHELERIEERLFALRAAGRKYNAPVDQLAALNARYAADLAL
                     LDAGTARLAELEKEAAAAVDRYIKAAAALSGHRRDVAATLDKTVNGELKPLKLDQALF
                     STAIKTTPETPGPDGIDRVEFWVRTNPGTQPGPLMKVASGGELARFMLALKVVIADRG
                     SAPSLVFDEIDTGVGGAVADAIGARLARLAGRVQVLAVTHAPQVAARADHHYLITKDA
                     LAKGKRIATRIAELEPDRRREEIARMLAGAEITVEARAAAERLMQAAVR"
     gene            2309..2524
                     /locus_tag="VLJ17_19280"
     CDS             2309..2524
                     /locus_tag="VLJ17_19280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016848568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25160.1"
                     /translation="MNNFTIFTANRTTHVKIVVVSLVASIVVLMVGITAHHSGTTDSM
                     ARIQTAGPVVKAGKPVKLGRGDLIAIQ"
     gene            complement(2706..3581)
                     /locus_tag="VLJ17_19285"
     CDS             complement(2706..3581)
                     /locus_tag="VLJ17_19285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma factor"
                     /protein_id="HSV25161.1"
                     /translation="MNDSHAGPLKEPEELTPDIRAAEYVLGTLGSAEREEAKAMLAFD
                     PAFASLVRDWERRLGELHALADSFEPPPEVWDAIRAKLPETAQLAPIRLPEIPPPRPS
                     RSFPPRVITALNRQMARWRMVAAATSAMAAVFALFIITSNVAPTVLPDSLRPQSRGIA
                     QVIEGAVPPPPRFVAVLQRDSTAPAFILTVDPAGRNLTIRRVAAEREPGKSYELWLMS
                     NKFPVPKSLGVVGEGDFTQSSNPVPLDPAIIRDATFAVSLEREGGSTSGAPSNVMFTG
                     QLVEVTPSSGAPAAR"
     gene            complement(3578..4123)
                     /locus_tag="VLJ17_19290"
     CDS             complement(3578..4123)
                     /locus_tag="VLJ17_19290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018316925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSV25162.1"
                     /translation="MLTTPELVWLVAAVAKGDQAAFERLYQATRAKLYGTAIRILRRA
                     DLANEVLQEVYLRVWNSAGQFDPAVASPITWMVVIARTHALDLARKKAEISIEEEPEV
                     MEVADESHGPVVKPEMSEELKRLLACMGRLEEDRRRLVLLAYYGGWSCEQLATKFEKP
                     VNTINTWLRGALVDIRECLGP"
     gene            complement(4285..4701)
                     /gene="fliJ"
                     /locus_tag="VLJ17_19295"
     CDS             complement(4285..4701)
                     /gene="fliJ"
                     /locus_tag="VLJ17_19295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export protein FliJ"
                     /protein_id="HSV25163.1"
                     /translation="MKSRNTLIRLKKFQLDEKRRKVAQIEAMIADFQRMGADLEREIV
                     AEQERAGIHDPTHFAYPTYAKAAIARRENLKRSVDELAVQLDDAKTALQESFEELKKV
                     ELLDERDQVRERAAEEMREQADLDGLGALRARSALA"
     gene            complement(4794..6116)
                     /gene="fliI"
                     /locus_tag="VLJ17_19300"
     CDS             complement(4794..6116)
                     /gene="fliI"
                     /locus_tag="VLJ17_19300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein export ATPase FliI"
                     /protein_id="HSV25164.1"
                     /translation="MKALAEQIAELDRAQIYGRVVGVRGLMVEVAGPLQAMSIGARVA
                     VEATDRMIPCEVVGFSGSNALLMPFAALEGVRRGCRAIVNAAATGVRPSIGWLGRVVN
                     AMGEPIDGQGRLPSGPSPTPFRNVPPPAHARRRVGAPLDLGVRALNTFLTCCRGQRLG
                     IFAGSGVGKSVLLSMLARNAAADVSVIGLVGERGREVQEFIQDDLGPEGLARSVVVVS
                     TSDEPALMRRQAGYLTLAIAEYFRDAGRDVLVLMDSVTRFAMAQREIGLSAGEPPTAK
                     GYTPTVFTELPRLLERAGPGVSDGSITGIFTVLVDGDDHNEPISDAVRGILDGHIVME
                     RTIAERGRYPAINVLKSISRTMPKSADPAFMPVIHRARTVMATYADMEELIRLGAYRP
                     GSSAEVDEAIRLHKPLERFLGQAKDEATSITDGYRHLAEIVGLLETEN"
     gene            6535..7239
                     /locus_tag="VLJ17_19305"
     CDS             6535..7239
                     /locus_tag="VLJ17_19305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002964699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV25165.1"
                     /translation="MRVLLIEDDGATAQSIELMLKSESFNVYTTDLGEEGVDLGKLYD
                     YDIILLDLNLPDMSGFEVLRSLRVSKVKTPILILSGLAGIEDKVKGLGFGADDYMTKP
                     FHKDELVARIHAIVRRSKGHAQSVIQTGELVVNLDTKTVEVNSQRVHLTGKEYQMLEL
                     LSLRKGTTLTKEMFLNHLYGGMDEPELKIIDVFICKLRKKLANASSGKNFIETVWGRG
                     YVLREPTDDDIRVPAE"
     gene            8011..8562
                     /locus_tag="VLJ17_19310"
     CDS             8011..8562
                     /locus_tag="VLJ17_19310"
                     /inference="COORDINATES: protein motif:HMM:NF014136.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin"
                     /protein_id="HSV25166.1"
                     /translation="MSDILDERDFAHVGNKTVNLRIEDIAASQEFRKIYETLPNVVSA
                     EDMPWERSPDGLIKHLVHHKMNTRERCVEAYMQFLKPGERSGKHRHMWEEVLFCVEGA
                     GYDLHWDLNFDCLDAFDWQWADQPKKFTWERGDFIYVPPFSIHQHFNNHATSEARLIV
                     ISNRIVKEMGFDWFDQIENAPGF"
     gene            complement(8672..9736)
                     /locus_tag="VLJ17_19315"
     CDS             complement(8672..9736)
                     /locus_tag="VLJ17_19315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25167.1"
                     /translation="MSSAKPTPLKFILSAAAALLLATTGAWADIIKKADMLRGFTTTR
                     AQCAAIPQTLWLTVDRHDFCVRYYLSTAGGESIRPIVFLQGDYLGKLGPNLMWLDPSG
                     TEDINTDDLMKTADAFSRMAKTTAIYLARIGVDGTSGNHVFRKTLLELHLMNAALDVI
                     KQHHGFQGFHLVGQSGGSKLAGGLLGMRRDVVCAVFGSGPMSAPWRGTTTDPARTYFD
                     VSEEIPLLAANRSVRMFLVTDTADSKVPLKDQKAFVDKMRQAGRQIPQYFVEATDDHH
                     HGVVAYAQLVAAGCVLGKSDGEIAIAVSTIVRRNVEFNELRRRETAALAQNEIAARQP
                     LVDPRTVPVGFASRSVGNRL"
     gene            9935..10813
                     /locus_tag="VLJ17_19320"
     CDS             9935..10813
                     /locus_tag="VLJ17_19320"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV25168.1"
                     /translation="MRVFMAVALMAALALSSAAAAGLPEERRQCFARDGVPADQKLVA
                     CTALIESGQETPQGLVAAFNTRGIAYHNKQDYDRAIRDYDQIIRIDPGNAIAYNNRGN
                     SFHKKALFDRAAQDYDQAIRLNPKYALAFVNRAVIHRIKGRLDSAIADCDQAIAINPN
                     FAPAFFGRALAYQDKGRWDFDAYLNEGRYEDRAIADYDQVIRLDPNNATAFSNRGNAY
                     ISRRQYERAIADYGEAIRLVPNNAATFKSRGYALRFVGQYERAIADYRKALTLNIDEA
                     TKKQVETALKQLSAAS"
     gene            10979..11953
                     /locus_tag="VLJ17_19325"
     CDS             10979..11953
                     /locus_tag="VLJ17_19325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007601040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSV25169.1"
                     /translation="MKLLIWVVTFAAALASGPGPNAQIYPSRPISMNVPYAAGGPLDV
                     MVRVVADGLRAALGQTIVIENVAGAGGSIGVGRAARATPDGYTISAGNWSSHVANGAV
                     YTLSYDLRNDFDPVSLLPYEANVIIARKDFPANTLAGLIAWLKQNPDKASAGTSGIGG
                     PSYMSAAFFQMRTDTRFTLVPYRGAGPALLDLVAGQLDIMSTGPAIALPHIRDGTVKV
                     YAVTAKNRMAAAPDIPTTDEAGLPGFYFSAWAGLWVPKGTPREIIARLNVAVRDALAD
                     PTIRRRLAALAIEVPPLETLGPETLGAFHKAEIEKWWPIIKAAGIKGE"
     gene            12049..12549
                     /locus_tag="VLJ17_19330"
     CDS             12049..12549
                     /locus_tag="VLJ17_19330"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV25170.1"
                     /translation="MYDIVVRGGTIIDGTGRAAFTGDVAIADGRIAAVGGKAGPARRD
                     IDAAGLLVTPGWVDVHTHYDGQAMWDPLLAPSCWHGVTTTVFGNCGVGFAPVKPQHRA
                     ALMDLMEGVEEIPGVVLADGLTWEWESFPISSMRWSASRVRSMWPRRSHICRCASMSW
                     ATAPFG"
     gene            12579..12848
                     /locus_tag="VLJ17_19335"
     CDS             12579..12848
                     /locus_tag="VLJ17_19335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25171.1"
                     /translation="MRRLTIEALHAGAFGFTTSRTNSHKTPAGDMVPSRNAEADELLG
                     IGSALGAAGAFGMNSDFDDEESELAWLTKLAKETGRPAWFLLTDC"
     gene            12915..>13545
                     /locus_tag="VLJ17_19340"
     CDS             12915..>13545
                     /locus_tag="VLJ17_19340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacylase"
                     /protein_id="HSV25172.1"
                     /translation="MTAQIAGRPIGVMMGIGTAINPFTVRPSYRNLEKLSIAEQRVRL
                     RDPEIRRRILADKPSEAEVAKLAQFRQHVVTRWDKFFVMSDPPDYEPGEEKSVAAIAA
                     HEGRTPDEVAYDYITEAEGRYLYFPLVNYVCSDHEPIRAMLTDSGTLLGLSDGGAHCT
                     SIVDAGVPSFMLSHWGRDRRRGPRLPLELLVKRQTRETADFFGFIDRGRL"
BASE COUNT         2645 a         4163 c         4148 g         2589 t
ORIGIN      
        1 caatccgacc ttatttgact ctgaggctag cagatctttt gcctttctag cagatgccca
       61 acagaactgc gacgccctcc cggcggtttg atgcgtccct caggtcgcgc ggttcaaggg
      121 caggttcgcg gcgcgcgcga acgcggtcac cgcaccgccg cctgcatcag ccgctccgcc
      181 gcggcgcggg cctcgacggt gatctcggcg ccggccagca tgcgtgcgat ctcttcacgc
      241 cggcggtcgg gctcaagttc ggcaatccgg gtggcgatcc gtttgccttt cgccaacgcg
      301 tccttggtga tgagataatg gtggtcggca cgcgccgcga cctgtggggc gtgggtgacg
      361 gcgagcacct ggacgcgccc ggcgaggcgc gccagacgcg ccccgatcgc gtctgcgact
      421 gcaccgccga ccccagtgtc gatttcgtcg aacacgaggc ttggtgccga gccgcggtcc
      481 gcgatcacga ccttaagggc cagcatgaag cgggcaagct cgccgcccga cgccaccttc
      541 atcagcggtc ctggctgggt gccggggttg gtgcgcaccc agaactccac ccggtcgatg
      601 ccgtctggcc ctggggtttc gggcgtcgtt ttgattgcgg tcgagaacag ggcctggtcc
      661 agcttgagcg gtttgagttc gccgttcact gtcttatcga gcgtcgcggc gacgtcgcgg
      721 cgatgcccgg acagcgccgc cgccgccttg atgtagcgat cgacggcagc ggcggcctcc
      781 ttttcgagct ccgcaagccg tgccgtaccg gcatcgagca aggcgagatc ggcggcatag
      841 cgcgcgttca gcgccgcaag ctggtcgacc ggggcattgt atttccggcc ggcagcgcgt
      901 agcgcgaaca ggcgctcctc gatacgctcc agctcgtgtg gatcaaaagc tgcggtcgcg
      961 agcgcccggt ctatatggtg gctcgcttcg tcgagcgcca tcagcgcggc atcgagcgcc
     1021 ttcacggccg gatcgataaa gccgggcgcc tgggccgaac gccgctccag ccgacgcact
     1081 gccgccgcca gcgccggcac cggcgagccg ctacccgaca ccaccgtatg ggcctcgcgc
     1141 aaatcttcgg ccaccttttc ggcctgcatc atgccggtgc ggcgctcggc gagggcggtt
     1201 tcctcaccgg gctcgggcgc aagctgcgtc agctcggccg cggcatggcg cagccaatcg
     1261 gcctcgcgct gggcgcgctc aacctcggtg cggtggcgta cgacctgctg ctcggcgtcg
     1321 cgtcggatcg tccacaggcg ggcgacttcg gcggcctcgg tctctaggcc cccataggcg
     1381 tccagcagct gccgatgggt cgcggtatcg acgagggcgc ggtcatcatg ctggccgtga
     1441 atttcgacca gcgcgctgcc gacgctgcgc agcacctgga ccgcaaccgg ctgatcgttg
     1501 aggaaggcgc gggtgcggcc gtcagccaac tggacgcggc gaaggatcag atcaccgtct
     1561 gccagaatgt cgttggcctt gagaatggcc catgccgggt gatctgccgg cacgtcgaac
     1621 gcggccgtca cctgaccctg ctcggcgccc tggcgcacga ggtctgagtc gccgcgccca
     1681 cctagtgcaa gcgcgaagga atcaagtagt atcgattttc cggccccagt ctcgccggtc
     1741 agcaccgaca ggccggcggc aaaatcgata tcgaggcgat cgatcagaac gatgtcgcgg
     1801 atcgagagcc ggatcagcat ggggtccccc atccccgtcg gcgccattcg gccgatgcct
     1861 cgcgccgaat ctcatgcctc tgtgttggca ccgcgtctca aaacattcaa tacggtccag
     1921 tagagcggcg tcgctacgga gacgatttct gcgtcgtggt aatcaacgat ttgtgatcat
     1981 cacggccgaa cgccgcaggt gagcacacgc tcgcgcaatg acgtttgcat tctatgcgtg
     2041 ggcgatacgg gcgcgctgcc ctcgcagtct tcggttgaca gcttgggcag aatcgccggc
     2101 ggagattgca caataaccac cgccgcggca ggcggttttg ccgactctac gcgccaacat
     2161 gaggggcgcg ccttaagtag ctgataataa gatgttttca gacatacacg ggacggtcga
     2221 gagaaagtta ccggatgtta agtgcgtttg aaccgaaacg cccgctgccg acactacatt
     2281 gatggaaggg ccccagaggg ttacggtcat gaacaatttt acgattttca ctgcaaaccg
     2341 aaccacccac gttaaaatcg tggtcgtttc actggtcgct tccatcgtag tactgatggt
     2401 gggcattacc gcccatcact caggaaccac cgatagcatg gcccgcattc agactgccgg
     2461 accagtcgtg aaggccggca agccagtcaa actcggccgc ggcgatttga tcgccatcca
     2521 gtgatcttcc ggggaaccgt acataggaac cttgcagacc tgccacctcc ctgcaacttg
     2581 aatacgcgcc ctaccggggc gctttttttg tcaatcagtg gtgcgcgtgt ggccaaactc
     2641 accgcgtggg ggcgtccgca gctgtgagct gataaggtgc acgggtcttg cggcgtgccc
     2701 tcgtgctacc gggctgccgg tgcgccggac gacggcgtta cctcgaccaa ttggcccgtg
     2761 aacatcacgt tcgatggagc acccgaggtc gaaccgccct cccgttccag cgaaaccgca
     2821 aacgttgcgt cgcggatgat cgccgggtcg aggggcaccg ggttgctgga ctgcgtgaag
     2881 tcgccctcac cgaccacacc taacgatttt gggaccggaa atttattcga catcagccac
     2941 aattcgtaac tcttgcccgg ctctcgttcc gctgccacac gccgaatcgt gagattgcgc
     3001 ccggcagggt cgacggtcaa aataaaggcc ggtgccgtgg agtcgcgctg caacaccgct
     3061 acgaagcgcg gcggaggcgg cacagcccct tcgatcacct gagcgatccc gcgcgactgc
     3121 ggccgcagcg agtccggcaa cacggtcggc gcaacgttcg atgtaatgat gaacagagcg
     3181 aacactgccg ccatggcgct ggtcgcggcc gcaaccatgc gccagcgcgc catttgtctg
     3241 ttaagtgcag tgatgacacg gggcgggaac gatcgcgacg gccggggcgg cggtatttca
     3301 ggcaatcgga tcggtgccaa ctgggcggtt tcgggcagct ttgccctgat ggcgtcccac
     3361 acctcggggg gcggctcgaa gctgtcggcg agggcatgca gttcgccgag acggcgttcc
     3421 caatcccgca ccagcgacgc aaaggcgggg tcgaacgcga gcatagcctt agcctcctcg
     3481 cgctcggccg agccgagggt accgagtaca tattcggccg cccggatgtc cggggtcagt
     3541 tcttccggct ccttcaaagg tccagcgtgg gagtcgttca tggtccgaga cactcccgaa
     3601 tatcgaccag cgcaccccgg agccacgtgt tgatggtatt gacgggcttc tcgaacttgg
     3661 ttgccaattg ttcgcagctc cagccgccgt aataggctag caacaccaag cggcggcggt
     3721 cctcttcgag gcggcccata caggcgagaa ggcgcttgag ctcttcgctc atctccggct
     3781 tgaccactgg accgtggctc tcgtccgcca cctccatcac ctcgggctcc tcctcgatcg
     3841 atatctctgc cttttttcgc gcaagatcga gggcatgagt gcgagcgatc accaccatcc
     3901 aggtgatggg cgatgccacg gccggatcga attgtccggc tgaattccaa accctgaggt
     3961 acacctcctg aagaacttca ttcgcaaggt cggctcgccg caatatacga atcgccgtgc
     4021 catagagttt cgcccgtgta gcttggtaga ggcgctcgaa ggcggcttgg tcgcctttgg
     4081 cgaccgcggc caccagccag acaagttccg gcgtcgtcag cattgagaaa gagccctact
     4141 ccgcggcaga ttattgccgt tggggctatt gcagtcgagc ggcaaatcgg cggcgccctc
     4201 gtggcgggct gaattcaatc attacgggtt cgcgcaagag cacgcccgga atgctgcata
     4261 tcgttcgcaa ttcaaaacgt taaactacgc cagcgcgctg cgggcccgca acgcgccgag
     4321 cccatcgaga tcggcctgct cgcgcatctc ttcagcggcg cgctcacgaa cctgatcgcg
     4381 ctcatcaagc agctcgacct tcttgagctc ctcgaagctc tcctgaaggg cggtctttgc
     4441 atcatcaagt tgcactgcaa gctcgtcgac cgatcgtttc aggttctcgc ggcgcgcaat
     4501 cgcggccttc gcataggtcg gataggcgaa atgggtggga tcgtggatgc cagcccgctc
     4561 ttgctcagcc acgatttcgc gctcgaggtc ggctcccatg cgctggaaat cggcaatcat
     4621 cgcctcgatc tgggcgacct tgcgccgctt ttcgtcaagc tggaatttct tcaagcggat
     4681 gagtgtgtta cgcgacttca tggaccccta ctcccgcggc ccgaacggac cggttgcgcg
     4741 cgactcagtc gagctggaac cacaatcaca tccatttagc taccatcata atgttagttt
     4801 tcggtttcca acaaccccac gatttccgcc aggtggcggt agccgtccgt gatgctggtt
     4861 gcctcatcct tggcctggcc gagaaaacgc tccagcggct tatggagccg gatcgcctcg
     4921 tcgacctcgg cgctggagcc gggccggtag gcacccagcc gaatcaactc ctccatgtcc
     4981 gcataggttg ccatcaccgt cctggccctg tggatgaccg gcataaaggc agggtcggca
     5041 gatttcggca tggtgcggga aatcgacttg agcacattga tggccggata gcgacctcgc
     5101 tccgcgatgg tgcgttccat cacaatatga ccatccaaaa tgccccgcac cgcgtcggag
     5161 atcggctcat tgtgatcgtc accgtccacc agcacggtga aaataccggt aatcgaccca
     5221 tcactgacac cgggtccggc gcgttcaagg aggcggggta actcggtgaa gacggtcggt
     5281 gtatagccct tggcggtcgg gggttcgccg gccgaaagcc cgatttcccg ctgcgccatg
     5341 gcgaagcggg tcaccgaatc catcagcacg agaacgtcgc ggccagcgtc gcgaaaatat
     5401 tcggcgattg ccaaggtgag atagccggcc tgcctgcgca tcagggccgg ctcgtcggag
     5461 gtcgagacca ccaccaccga gcgtgcaagg ccctcgggac cgagatcgtc ctgaatgaac
     5521 tcctgcacct cccggccgcg ctcgccgaca agaccgatca ccgaaacgtc ggcggcagcg
     5581 ttgcgggcca gcatggacaa taatacagat ttgccaaccc ctgagccggc gaaaattccg
     5641 agacgttggc cccgacagca ggtcaaaaag gtgttgagcg ctcgcacccc gagatcgagc
     5701 ggcgctccaa cccggcgccg cgcatgcgcc ggcggcggca cattgcggaa cggtgtcggc
     5761 gacgggccgg acggcagtcg gccttggcca tcaatcggct cacccatggc attgacaaca
     5821 cgtccgagcc atccgatcga cggtcgaacc cccgtcgcag ccgcattcac gatagcacga
     5881 cacccccgtc gcaccccttc gagggccgcg aatggcatca gcagcgcatt ggagccagaa
     5941 aacccaacga cttcacacgg aatcatgcga tcggtggctt cgacggcaac ccgcgcaccg
     6001 atcgacatcg cctgcagcgg ccccgccacc tcgaccatca agccgcgcac gccgacgaca
     6061 cggccataaa tctgagcccg atcgagttcg gcaatttgtt cggctagagc tttcacggac
     6121 aggcccttac ggaaacgcct tgatcgacat cgaagcgcac gatttctgcc tcgccagtta
     6181 attcaaacct tgactcatta acgtggtgtt tacccggatc gttaatgatt gctccaccgt
     6241 ccatgggacc agctaactgg ctcgctcagc caggacgggt gagcgagtcg cctgaatcgg
     6301 ttagcgccgg ttcttaacac cagacacgaa ccgcaacgtg cttgaaaaaa cccactacac
     6361 caacatatta ggccgattcg gcgacaattg cccattcggt gcttgcgctt gggaatcagg
     6421 ttttgttaag catccctcgt taaggtttcg aatcagtggt cccaaggcga ttaccgaggc
     6481 tgccccgttc ggcaggcccg acctgacgcc gaaacggcgc agaaggggac tggcatgcgc
     6541 gttctattaa tcgaagacga tggcgcgacc gcgcaatcga ttgagttaat gctcaagtcc
     6601 gagagcttca acgtctatac gacggatctc ggcgaagaag gcgtcgatct cggcaagctt
     6661 tatgattacg acataattct gctcgacctc aatctacccg acatgtcggg ctttgaggtg
     6721 ctgcggtcgt tgcgggtgtc aaaggtcaag actccgatcc tgatcctctc cggacttgcc
     6781 ggcatcgagg acaaggtgaa aggcctaggt ttcggcgccg acgactatat gaccaagccg
     6841 ttccacaagg acgaactggt ggcgcgcatc catgcgatcg tgcgacggtc caaagggcat
     6901 gcccagtccg tgattcagac cggcgaactc gtggtcaatc tcgacaccaa gaccgttgag
     6961 gtcaattcac agcgcgtcca tctcaccggc aaggagtacc agatgctgga gctcctctcg
     7021 ctgcgtaagg gcactacgtt gaccaaggag atgttcctca accatctcta cggcggcatg
     7081 gacgagccgg agctcaaaat catcgacgtg ttcatctgta aactgcgcaa gaaactcgcc
     7141 aacgcctcga gcgggaagaa ctttatcgaa accgtatggg gccggggcta tgtgctgcgc
     7201 gagcccaccg atgacgacat ccgcgtgccg gcggaatgac ggacggatgt cgactgtcga
     7261 tcggggccga atgttaggac atctcccgac cctcgctcgc agccaggccg ctgcagccaa
     7321 actcctttga atcacttcgc gaattgaagc cccagcacat tctgccttcg attgccctga
     7381 cgtcaccttc gatggtgggc tcaaccctta agagggcaat ttgggcgcgc cgttgtggcc
     7441 gctgccagat tcgcgccgcc cgatctactt cctgacaacg atatcggcct atcgggagca
     7501 cgagccggag cgccttggcg ggagcgcgga cttttggttg ggcatgatgc tctcgtcgtt
     7561 tcggttcggc tgttctgggg tcgtggaata acgcgacaat gatgaatccg agcagcaaaa
     7621 tcttcggcga aagtttgatt tttcctcctc ggcagcatga tcatttgccg cttcgcgccg
     7681 gagaggcaat ctgaagtacg gtgcacacaa ttaacgtggc tggaacacat atccgcctca
     7741 ggctgatcct tccaccgtca tttcccgcct tgcaagacct tagctcccga gcgaaggtac
     7801 ggggtccact tcggcaatgg ttctggtcat tttgagctac tttgtcggag ccatggccgg
     7861 cttttattcc ggccatccac gccttactgc tgaagctcgg taagaaagac gtggatactc
     7921 gcgacaagtt acgataagcg cgggcataac gatggaggga tgattggatc aaacagaatg
     7981 tgcttctaaa atcaaattgg agggcatgat atgagcgata ttctcgatga acgcgatttc
     8041 gcccatgtgg gcaacaagac cgtgaatttg cgcatcgagg atatcgccgc ctctcaggag
     8101 tttcgcaaga tatacgagac gcttcctaat gtggtcagcg ccgaggacat gccatgggag
     8161 cgctcgccgg acgggctgat caaacatctg gttcatcaca agatgaacac gcgagagcgc
     8221 tgtgtcgaag cctatatgca gttcctcaaa cccggcgagc gttccggcaa gcaccgccac
     8281 atgtgggagg aagtgctgtt ctgcgtcgag ggggccggct atgatctgca ctgggacctg
     8341 aatttcgatt gcctcgacgc tttcgactgg cagtgggccg accagccgaa gaaattcaca
     8401 tgggagcgcg gcgatttcat ctacgtgccg ccgttttcga tccaccagca tttcaacaat
     8461 catgctacgt cggaggcgcg gctgatcgta atctccaacc gcatcgtcaa ggaaatgggc
     8521 ttcgactggt ttgaccagat cgagaacgcg ccggggttct gaatcccttc ccgtcttcgg
     8581 ggagggtggc cgagcgaagc ggggtgacac gggattgact ttgccatgga tggaacccgg
     8641 cccttcccga agacggccaa gccttggcaa attagaggcg attgccgacg gagcgggagg
     8701 caaagccgac cggaacggtc cgaggatcga cgaggggctg acgcgcggca atttcgtttt
     8761 gcgccagagc ggccgtctct ctgcgtcgca gctcgttgaa ctcgacgttt ctcctcacaa
     8821 tggtgctgac agcgatcgcg atctcgccat ctgatttgcc gagaacgcag ccggctgcga
     8881 cgagttgcgc ataagccacg acgccgtgat gatggtcgtc ggtcgcttcg acaaagtatt
     8941 gcgggatttg tcgccccgcc tgacgcatct tatcgacaaa tgccttctgg tctttgaggg
     9001 ggaccttgct gtccgcggta tccgtcacca aaaacatgcg cacggaacgg ttcgcggcca
     9061 gcagcggtat ctcctcgctg acgtcgaaat atgtccgtgc cggatccgtc gtcgttcctc
     9121 gccaaggcgc tgacatcggg cctgaaccga acaccgcaca gacgacgtcg cggcgcatcc
     9181 cgagaagccc gcctgcgagc tttgagccgc cggattgacc gacaagatga aagccttgaa
     9241 atccgtggtg ctgctttatg acatcgagcg ccgcgttcat caggtgaagc tcaagcaggg
     9301 tcttacgaaa gacgtgattg ccggacgttc cgtcgacacc gatgcgtgcc agatagattg
     9361 cggtggtctt ggccatcctg gaaaacgcgt cggcggtctt catcagatcg tcggtgttga
     9421 tgtcctcggt gccggatgga tcgagccaca tgaggttcgg tcctagcttt ccgagatagt
     9481 cgccctgaag aaacacgatc ggacgtatac tttcgccgcc cgcagtggag agatagtacc
     9541 gcacgcagaa gtcgtggcgg tcgaccgtca accacagggt ctgcgggatc gcggcgcact
     9601 gcgcacgcgt cgtggtgaag ccgcgcaaca tgtcggcttt cttgatgatg tccgcccagg
     9661 cgccggtcgt tgccaacaaa agagcggctg ccgccgacaa gatgaatttt agcggggttg
     9721 gtttggcgct gctcatgatt gagacaccca cgaaattgcg aactgtcacc aatgttggtc
     9781 aatcacgagg gccgataggt tcgaatggcg ccaatttgtg cggccggccg caggaggccg
     9841 cctgccgttt ccgtccgtcg atttattccg gcaggctcga aagatgaaca attttctcgg
     9901 ccgagcgact aacggctaag cgacggagga cgcaatgcgt gttttcatgg ctgtggcgct
     9961 catggcggcc ctggcgctgt caagcgcagc ggcggccggc ttgccggagg agcggcgcca
    10021 atgttttgcg cgcgatgggg tgcccgctga tcagaagctc gttgcctgca cggcattgat
    10081 cgagtctggg caggagacgc cgcaaggcct cgtggccgcc ttcaacacgc gcgggatcgc
    10141 ttaccataac aagcaggact acgacagagc cattcgggac tacgatcaaa tcatccggat
    10201 cgatcccggt aacgccattg cgtacaacaa ccgtggtaac tccttccaca agaaggcgct
    10261 gttcgaccgc gccgcgcaag attatgacca agccattcgg ctcaatccaa aatacgcatt
    10321 agcatttgtc aatcgagcag tgatccaccg aatcaaggga cggttggata gcgccattgc
    10381 ggattgcgat caggcgattg cgatcaatcc taatttcgcc ccggccttct tcggccgcgc
    10441 tctcgcgtat caggacaaag ggcgatggga ttttgatgcc tatctgaacg aaggacggta
    10501 tgaggaccgc gcgattgcgg actacgacca agtgatcagg cttgatccaa ataacgccac
    10561 agcgttcagc aaccgtggta atgcgtacat cagtcggcgg caatacgaac gcgcaatcgc
    10621 tgactatggt gaggccatcc ggctggtccc caacaatgcg gcgactttca aaagccgggg
    10681 ctacgcactg cgatttgttg gccagtatga gcgcgccata gctgactatc ggaaggcgct
    10741 cacgctgaac atcgatgaag cgacgaagaa gcaagtcgag accgctctca agcaactcag
    10801 tgccgcatcg tgacgaatgt cctggagtga agcgcccagg cagtgaggcg cccaggcatt
    10861 ggcgccggtc gtgtttgcca ataatatgat gcccggaccg cattgggcgg cgaggtcgat
    10921 ttcatggcgc cgcgccccca gttgctgcat ttggcaggaa atcacgccgg aggggcccat
    10981 gaagctgttg atctgggtcg tcacatttgc agccgcgttg gcgagcgggc caggcccaaa
    11041 cgcgcagatc tatccatcgc ggccgatcag tatgaacgtg ccttacgcgg cgggcgggcc
    11101 gctggacgtt atggtgcggg tcgtggcgga tgggctgcgg gccgcactcg gtcagaccat
    11161 cgtcatcgaa aatgttgccg gtgcgggggg cagcattggc gtcggccgcg ccgcgcgggc
    11221 tacgcccgac ggctatacga tcagcgccgg caactggagt tcacacgtcg caaacggcgc
    11281 cgtctatacg ctttcctatg atctgcgcaa cgacttcgat ccggtttcgc tactccccta
    11341 cgaggccaat gtgatcatcg ccaggaagga ttttccggca aacacgcttg ccggattgat
    11401 cgcctggttg aagcaaaacc ccgacaaggc atcggccggg accagcggca ttggcggtcc
    11461 gtcctacatg tcggccgctt tttttcaaat gagaaccgac acgcgcttca cgctcgtacc
    11521 ttatcgcggt gcggggccgg ctctgctgga cctcgtggcc ggccaactgg acatcatgag
    11581 caccggcccg gcgatcgcat tgccgcatat ccgcgacggg accgtcaaag tctacgcggt
    11641 caccgccaag aaccgcatgg cagcggcgcc ggacatcccc accactgacg aagcgggatt
    11701 gcccgggttc tatttctccg catgggccgg gctatgggtt ccgaagggaa cgccacgaga
    11761 aattatcgcc agactgaacg ttgcggtacg cgacgcgctg gccgacccca ccatacgacg
    11821 gcgtcttgca gcgctcgcca tcgaggtgcc gccgctcgaa acgctcgggc cagaaacgct
    11881 cggcgcgttt cacaaggccg agatcgagaa gtggtggccc atcatcaagg cggcgggtat
    11941 caagggagag tgactcgaag tgccaacggg tgcgcaggcc agtggcggtt gcgtcgcgcg
    12001 cgatgattgg cgcatgatcg ttcgatcgcc ggtcacggga gcggctccat gtacgatatc
    12061 gttgttcgcg gcggcacaat catcgacggg accggccggg cggctttcac cggcgacgtg
    12121 gcaatcgcgg atgggcgcat agctgcggtc ggcggcaaag cgggaccggc caggcgcgac
    12181 atcgacgcag cgggtctcct ggtcacgccc ggctgggtcg atgtgcacac gcactacgac
    12241 gggcaggcaa tgtgggaccc gctgctcgcg ccctcctgct ggcatggcgt caccacgacg
    12301 gtgttcggca actgtggtgt gggttttgcc ccggtcaagc cgcagcatcg tgcggcgctg
    12361 atggacctga tggagggcgt cgaggaaatc cccggcgtgg tgcttgctga cggcctgacc
    12421 tgggaatggg agagttttcc gatttcctcg atgcgttgga gcgccagccg cgtgcgatcg
    12481 atgtggccgc gcaggtcgca catttgccgc tgcgcgtcta tgtcatgggc gaccgcgcca
    12541 ttcggttaga gccggcaaca ccggaagata tcgccgagat gcggcgcctc actatcgagg
    12601 cgctccacgc cggcgccttt ggttttacca cctcgcgcac caactcccac aaaacgcccg
    12661 ccggcgacat ggtgccgtcg cgcaatgccg aagccgatga gcttctcgga atcggttctg
    12721 cgcttggcgc cgccggcgcc ttcgggatga acagcgattt cgacgacgag gagagcgaac
    12781 tcgcctggct gacaaagctc gccaaggaga ccggccgccc ggcttggttc ttgctcaccg
    12841 actgctagga ggccccagcg cgctggcggc gcctgcttgc agccgtacat gtggcgcgca
    12901 aagacggcgc gcccttgacg gcgcaaatcg cggggcggcc gatcggcgtc atgatgggca
    12961 tcggcaccgc aatcaacccg tttacggtgc ggccgagcta ccgaaacctc gaaaaactaa
    13021 gcatcgccga gcagcgtgta cggttgcgcg atcccgaaat ccgccgccgg attctcgccg
    13081 acaagccatc ggaagccgaa gtggcaaaac ttgcgcaatt ccggcagcac gttgtcacgc
    13141 gctgggacaa gttctttgtc atgagcgacc cgccggacta tgagcccggc gaggagaaga
    13201 gtgtcgccgc gatcgccgcc cacgaaggcc gcacgcccga cgaggtggcg tatgattaca
    13261 tcaccgaggc tgagggccgg tatctgtact ttccgctggt gaactatgtt tgcagtgacc
    13321 atgagccgat ccgtgcgatg ctcaccgatt ccggaacgct cttgggcttg agcgacggcg
    13381 gcgcgcactg cacttccatc gttgatgccg gcgtgccgag cttcatgttg tcccattggg
    13441 ggcgcgaccg tcggcggggg ccgcggttgc cgctcgaact tttggtcaaa cggcagaccc
    13501 gcgagactgc agatttcttc ggcttcatcg accgtggccg gcttg
//
LOCUS       DATILV010000796         7939 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4534735, whole genome shotgun sequence.
ACCESSION   DATILV010000796 DATILV010000000
VERSION     DATILV010000796.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7939)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7939)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7939
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4534735"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(488..1666)
                     /locus_tag="VLJ17_19345"
     CDS             complement(488..1666)
                     /locus_tag="VLJ17_19345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25173.1"
                     /translation="MVSRSHHEAMFPIGWTRRDVLWALLAAATLPSASRAQLADRPLV
                     GALRWDAWYAPGSEPTVAVERSLAPPQYQSRLPFFAYPAAGNQMLLPALTPSLLQLEI
                     EQAAYAGLDFWAFVAYPHESPMSVALNQYLAVRPLPRIRFCLFTALEYWGSANASSPL
                     IEEHVALMRHDSYVRTPDGRPIYFLGFVTASKANDRWRGLSGLRAGVDTFRSRATAAG
                     AGNPYVVLCGTPRDVVGWVGALSPDAVGAYAISDGRGVGDYAALTRVVEAGWQVLAGA
                     GVPVVPTVMSGWDRRPRIEHPVPWERGQQPGAGLEYHFDTPRPQELTAHLRRAFTWIA
                     GQPPQRRAPVALIYAWNENDEGGWLVPTIPCNTERLEALRAALAADRSGRSPGCRLVP
                     "
     gene            complement(2083..2364)
                     /locus_tag="VLJ17_19350"
     CDS             complement(2083..2364)
                     /locus_tag="VLJ17_19350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25174.1"
                     /translation="MRFPSRARPTTYFTLYYDSPVGTAMTGGASTKTLVDYVNYTAGM
                     GISGISTLDATGLGSVTLTADQVSEFSTINAGGGEVDLGYRWTAAATTR"
     gene            complement(2386..2547)
                     /locus_tag="VLJ17_19355"
     CDS             complement(2386..2547)
                     /locus_tag="VLJ17_19355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25175.1"
                     /translation="MSLTADPLSQFSTINTVGNPLDLIAAGSGTYDLTGKALNSDMYL
                     GTRARRARM"
     gene            complement(2566..2715)
                     /locus_tag="VLJ17_19360"
     CDS             complement(2566..2715)
                     /locus_tag="VLJ17_19360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25176.1"
                     /translation="MIGGTGNDLFYASHGSQAGTTIIGGSGMNTLRDDYVTDIWQINN
                     SGRQT"
     gene            2702..4054
                     /locus_tag="VLJ17_19365"
     CDS             2702..4054
                     /locus_tag="VLJ17_19365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25177.1"
                     /translation="MPPIKVSTPAPLIDGQTMGIIPSSISSLRSGAPKQQNTAVEFED
                     FKSAPALIHQLLPPNAPDFLKSAQSVIVQSAQTGSRIPQDMLASQIADTMHGYYNFLE
                     GATTLDNRVTKAGVQGLWVHAAAATVAALSFEIMTAGLAFQPFISQNRLGYPLLITQA
                     ALMTALIKWNKGLVRGMYVASSIAFATILGYGASQNPAVSALGQYFHLVTSDDKLDPR
                     TYEQLVKVQAQLPALKDKVTDLKEAVEQARKTDATVRGNANAISRKTTFSRTSAQYQT
                     ASNELSNMVGQEAQLKAKIEAAQAADPSRERVQRYAWALFVLLNAASTMWYARVLSEA
                     EPAHEAALGRKQREKLVAEEVKALRENATKREALASKFLVGLRSLYVNTLASNGKKEE
                     ANRKADEIFGDIHALSQNAAQAFNAMVGNNPQPETTAELHEPNKKSVPVALTTRRAPT
                     "
     gene            complement(5330..5416)
                     /gene="opgC"
                     /locus_tag="VLJ17_19370"
                     /pseudo
     CDS             complement(5330..5416)
                     /gene="opgC"
                     /locus_tag="VLJ17_19370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014891179.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="OpgC domain-containing protein"
     gene            complement(5554..6228)
                     /locus_tag="VLJ17_19375"
     CDS             complement(5554..6228)
                     /locus_tag="VLJ17_19375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014493192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HSV25178.1"
                     /translation="MKRKGKLPFDPKVFLSKANGGRAISYYRKDQSVFTQGAPADSVF
                     YIQRGKVKKTVVSEQGKEAVVALLGTGDFFGEGCLTGQPLRLATVSAVTECVIARITK
                     ADITRVIHEEPAFAELFIAHLLARNSRVEEDLVDQLFNSSEKRLARTLLLLANFGKEG
                     RPEPIIAKISQETLAEMIGTTRSRVSFFMNRFRKLGLIDYNGQIEVHSSLLDVVLHEK
                     PEIKER"
     gene            complement(6476..6703)
                     /locus_tag="VLJ17_19380"
     CDS             complement(6476..6703)
                     /locus_tag="VLJ17_19380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25179.1"
                     /translation="MAPKDKNSLPARFADETLAWERWHSVQPLFSCPNPTELREFCKR
                     GGTKSPADGDDKQEFFHLPYLWVFTPFAAAS"
     gene            complement(6877..>7939)
                     /locus_tag="VLJ17_19385"
     CDS             complement(6877..>7939)
                     /locus_tag="VLJ17_19385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="arylsulfatase"
                     /protein_id="HSV25180.1"
                     /translation="PGHINDAGGIRRQFHHVIDVVPTVLEATGIPQPDTINGIKQLPI
                     EGVSMAYTWDKTNANATTRHTTQYFEMLGNRAIYHDGWMAATTPATLPWELSTATPPD
                     VITGYNWELYNVNEDPTQFNDLAAKMPDKLKQMQDLFYSEAKKYNVLPLDNSTLARWN
                     TPRPSLTAGRTEFTYSGELTGVPASAAPSILNKSYTITAEVEIPAGGAEGMIVTEGGR
                     FGGYGLFLSKGEFGIGRGKVVFLYNLLDLKRTTWEGPELETGKHTIVFDFKSDGPGLG
                     KGGTGLLYVDGKEVAKNSLEHTTPVTFPEDETFDVGQDTRTGVAMVEYRYDVPFKFTG
                     KIDKLTFKLEPVQDTTAKR"
BASE COUNT         1732 a         2306 c         2196 g         1705 t
ORIGIN      
        1 ggtggctgat caggcttgtc cggcgcgagc accgggcgca gcgcctccag tcgcctcacg
       61 tcgcacggaa tcgtcggcag tagccagccg ccctcatcgt tctcgttcca cgcgtagatc
      121 aaagctgccg gcgcgcgacg tgcggccggt tggccagcca tccaggtcaa ggtgcagcgc
      181 agatgcgccg caagttctta tcacctcaat tgtgcagtta cggggcctta aggtcaactt
      241 cgatgcaaga ggcagcggaa cgagctactc gatgcgcgat ctcttcaatg cgctcggaat
      301 ccaggttcga agaagtgagc atgtcgcagg tcgaaacctt cgaaaaaatc aaaaccggcg
      361 aatgcgatcg acgtacggtc gctctacgac aaggtcgata ccgccgtact gaatgcgcgc
      421 tacagcgccc tctatccaaa atatgtcgaa ttcctgaaga ctaatggtct cagcgtgagg
      481 atataaatca cggcacgagc cggcatcccg gtgagcggcc ggaccggtcc gcggcgagcg
      541 cagcgcgcaa cgcctctagc cgctcggtat tgcagggaat cgtcggcacc agccagccac
      601 cttcgtcgtt ctcgttccag gcatagatca gcgcaaccgg cgcccggcgc tggggtggct
      661 gccccgctat ccaggtgaat gcccttcgca gatgcgccgt gagttcctga ggccgaggcg
      721 tgtcgaagtg atactcaagg cctgcgccgg gctgctgtcc acgctcccag ggcaccgggt
      781 gttcgattcg cggtcggcgg tcccatccgc tcatcaccgt cggcacgacg ggaacgccgg
      841 cgcccgcgag cacctgccat cccgcctcga cgacacgcgt gagcgcggca tagtcgccga
      901 cccctcgccc gtcggaaatc gcataggccc caactgcgtc aggactgagc gcgccgaccc
      961 aaccgaccac atcccgcggt gtgccgcaca agacaacgta gggattgccg gcccctgcgg
     1021 cggtcgcgcg cgatcggaac gtgtcgacgc ccgctcgcag gccgctcagt ccgcgccatc
     1081 gatcgttggc tttggaggcc gtaacaaaac cgagaaaata gattgggcgc ccatcgggtg
     1141 tgcgcacgta gctatcgtgc cgcatcagag cgacgtgttc ttcgatcagc ggcgatgacg
     1201 cattggcgct cccccagtat tcgagtgctg tgaagagaca gaatcggata cgcggcagcg
     1261 gtctcacggc gaggtattgg ttcagcgcaa ccgacatcgg gctctcgtgt gggtaggcga
     1321 cgaatgccca gaaatcgagc cccgcatatg cggcttgttc gatctcgagc tgcagaaggc
     1381 tgggcgtgag cgccggcagc agcatctggt tgcccgccgc cggataggca aagaacggca
     1441 gacgcgattg atattgcggc ggcgccaacg atcgttccac tgccaccgtc ggttccgatc
     1501 ccggcgcgta ccaagcatcc caccgcaacg cacctacgag cgggcggtca gccagctgtg
     1561 cacgagatgc cgagggcaat gtcgcagcgg cgaggagtgc ccacagcaca tctctccgcg
     1621 tccatccgat cggaaacatc gcttcgtggt gactgcgcga caccattcga aagcctcccc
     1681 gcggaacaat cgcgctgact cggcgcgaat agcggcatca atagcagcgc acagcttaca
     1741 cttttcataa cgcatccgaa cgatcgccgc tgccctgatt tggcaaccac aacggcaaat
     1801 gaggggtgta atcataaatt tcgatgcgct caggcgcaaa aggtgaaatg aaagagatcc
     1861 ggatgcgcaa acggcagcct cagccagcgc aagcttacac tcaaaagcgc tcacccgcgg
     1921 gtgaacgtag ccgaaaggca tattaatatc taagttgaat tccttgtcgc tctttgctcg
     1981 acgtttctta aagttggatt gtcgttacac tgagcaacaa agcgtggttt ttaggagcgc
     2041 cgccaacgcg atgagcaaag ctgatcgtcc cggctctggc tgtcagcgtg tcgtcgccgc
     2101 cgccgtccac cggtatccca gatcgacctc gccgccgccg gcattgatcg tgctgaactc
     2161 gctcacctga tccgccgtca gtgtgacgga gccaagaccg gtcgcgtcca atgtcgatat
     2221 gccgctgatg cccatgccgg cagtatagtt gacataatcg accagcgtct tcgtgctggc
     2281 tccacccgtc atcgcggtgc cgactggaga atcgtagtac aaagtaaaat atgtcgtcgg
     2341 ccgcgcccgt gatgggaacc gcatcctgcg attcgccaat cagcgtcaca ttcgcgctcg
     2401 tctggctcgc gttccaaggt acatgtcgct gttgagggcc ttgcccgtca ggtcgtaggt
     2461 gccgcttccc gccgcgatca gatcgagcgg gttgccgacc gtattgattg tgctaaattg
     2521 actgagcgga tccgccgtca ggctcaatgc gccgatatag acgtgctatg tttgcctgcc
     2581 gctgttgttg atctgccaga tgtcggtgac atagtcgtcg cgaagcgtgt tcatcccgct
     2641 gccgccaatt atggtggtgc cggcctgaga gccgtgactg gcgtagaaga gatcgttgcc
     2701 cgtgccgccg atcaaagtgt caacgcccgc accgctgatc gatggtcaga caatgggaat
     2761 tattccatca agcatttctt ccctccggag cggagctccc aaacaacaaa atactgctgt
     2821 tgagttcgaa gattttaaat ctgcacccgc gcttattcat caattgttgc cgccaaacgc
     2881 ccctgatttt ttgaaatccg cgcaaagcgt catagtgcag tcagcgcaaa ccggtagtcg
     2941 tattccgcag gatatgctgg ccagccaaat agctgatacc atgcatggat attataactt
     3001 tcttgaaggt gcgacgacat tagataatcg cgttacaaaa gccggcgttc aaggattatg
     3061 ggtacatgca gcggcagcca ctgttgctgc cctatcgttt gagattatga ccgctggact
     3121 ggcttttcag ccctttattt cgcaaaaccg gcttggctac cccctcctta ttacccaagc
     3181 ggctctgatg acggccctaa taaaatggaa taaaggcttg gtcagaggca tgtatgtggc
     3241 ttcatccatc gccttcgcca ccatacttgg gtatggggct tcgcaaaacc ccgcagtctc
     3301 tgcgctagga caatattttc atttggtcac aagcgatgac aaacttgacc ctcgaacata
     3361 cgagcagttg gtaaaagtgc aggctcaatt acctgcgctg aaagataaag ttaccgattt
     3421 gaaagaggcc gttgaacagg cacgaaaaac cgatgcgacg gttcgaggta atgccaatgc
     3481 catcagcagg aaaacaacct ttagtagaac tagcgcacaa tatcagactg caagcaatga
     3541 actgagcaat atggtcggac aggaagccca gctaaaagcc aaaatagaag cggcgcaagc
     3601 ggccgatcca tcccgtgaaa gggtccaacg ttacgcatgg gccctttttg tccttctaaa
     3661 tgccgcaagc acaatgtggt acgcccgggt tctttctgaa gccgagcctg ctcacgaagc
     3721 agctttgggc aggaagcagc gagagaagct cgtggcggaa gaagtaaaag ccctgcgtga
     3781 aaatgcaaca aaacgtgagg cgcttgccag caagtttttg gttggcttgc gctctctcta
     3841 cgtcaacact cttgccagca atggtaaaaa agaagaagca aaccgaaaag ccgatgaaat
     3901 atttggcgat attcacgctc tatcccaaaa tgccgcccag gctttcaatg ctatggttgg
     3961 caacaatcca cagcctgaaa cgacagctga gctgcacgag ccaaataaaa agtcggtgcc
     4021 cgttgctctt acgacgcgtc gggcaccgac atagccaaga gctgcttcgt ttatacccta
     4081 accaggagca atctgatgta tgcgcccgtg ggcgtcgcgt cccgaacctg ttcccgctta
     4141 ataaccgtac cagcttttgc atgccacgta agggtcagga tcgcctttct taatttcaga
     4201 acaggtttgg tgattttagt ctagctgccg cccgaggcat atctcgctct acttcgctgg
     4261 cacgaacagt caactgcaaa gtaattgtgg tttccatata ggcggacttg atcattcacg
     4321 atataattgc aagccaaaga aatggattgt aggtaaaaag agcgtccgca gcagcggcgc
     4381 caaccataaa ccggctgtaa taccacaagc ccatttaggt cgagcgaaaa taagttctgc
     4441 caccgtattg aaacctcagc cctagattta actaaaaatc agtcccgccg ttacgctgcc
     4501 catgcggcgc agccaatctt tctggccctg ggaaagttta acgtccggta accgtggata
     4561 tgcgtggctg taaacggcat gaccgaacgg ggcaacacgc gttacaagat tagctataac
     4621 tctgcgactt cgagcgttgc ataggttgca agcgcagcaa gcagcccttg acggcgggaa
     4681 atacggctcc cttgctctca tatattgcaa caaatccctg ccatggccac cggctgacat
     4741 tgggtcgagt ttgcaatgaa agctggccga atgtttgacg gccgagctcc agaaatctcc
     4801 ggaagcttca gtaccaagcc cttgagctcg gcaggcgaca gagcggcatg cccgcaaaga
     4861 atccgactcg cgccgccttg agaatcttat aatcataccg acggcactac ttttgcctct
     4921 gttaccaatc tctcaaagcc aagcagctgc cgccactgca tatttgctgg ccgccgaggc
     4981 accgctatcc cgaatgaaag ccgcagcgat taagcctatt ttcgcgctag gagcgagcca
     5041 agcctcgcct tgcgtttcct gaaaggaagc gaccccagcg tccagcggcc tgggaatgtc
     5101 cgtttttgat tccgcagtgc acgaaaaatt gactcgccag aaaatgaacg aacattcatt
     5161 tgagcggtta tggcatgagc gggttctggg ccgcgtaggt aacataatga cgacggacgc
     5221 tgccaatcgg attgacggga tcgatttctg gcgcggtttt gccctgctga cgattttcat
     5281 cgaccatctg ccggaaagca tcttccagta tgtccgctgt ggtctcgccg cggaaaaagc
     5341 gcgatccgta ggcgagcgcc accgatgcgc ctgacaggaa cacgaacagc tcagcggcgt
     5401 cggaaaagcc gaaattcccc taggtgcact gctgcgcccc ggatcaggat tcccccgact
     5461 atcgccgaat gcggatggtt ggcggaaggc agggcgacct aggcgggttg gcccggtgcg
     5521 tcacattgca gaatttattc cgcactgatt acttcatctc tctttgatct cgggcttctc
     5581 gtgcagaacc acgtccaaca aggaactgtg gacttcaatt tggccgttgt aatcaataag
     5641 acccaatttc cgaaatctgt tcatgaaaaa gctcacgcga gatcgcgtcg tgccgatcat
     5701 ctccgccagt gtctcttggc tgattttcgc tatgattggc tctggccgac cttccttgcc
     5761 aaaattcgcc agaagcagaa gggtgcgtgc gagccgtttc tcgctcgaat tgaacaattg
     5821 atcgaccagg tcctcctcga cacgactgtt gcgagccaag aggtgcgcga taaataactc
     5881 ggcaaacgct ggctcttcgt ggatcacgcg ggtaatgtct gcctttgtta ttcgcgcgat
     5941 cacgcattcc gtcacagcgg agactgttgc cagacgcagt ggttgtcccg tcaagcaccc
     6001 ttccccaaag aaatcgccgg tccccagaag tgcgaccacg gcttccttcc cctgctcgga
     6061 gacaacggtc ttcttgacct tgcccctctg aatgtagaaa acagaatccg cgggtgcgcc
     6121 ttgcgtgaag acactttgat ccttccgata ataggaaatg gctcgccccc cgtttgcttt
     6181 cgacagaaat actttgggat cgaatgggag ctttcctttg cgtttcatgg caagccctcc
     6241 cttcgcagga tctcggctga agaacgcaag ccattttaca acaatggctc caagaaggga
     6301 caatccgctt tgtcgcagcg ccgctcacct aagcaaggga gtgcttggcc tggccgtgga
     6361 catgcacctt gttgcgtgcc gtcgatggca gctttgggtg tgcgccttgt cacggcgcac
     6421 acccaaagca gcacttggcg agccttctgc attccggatc agtttgatat gctttctacg
     6481 aagccgcagc gaatggtgta aatacccata gataaggcag atgaaaaaac tcctgtttat
     6541 cgtcgccgtc cgccggtgat ttcgtcccac cacgcttgca gaactccctg agctcagttg
     6601 gatttgggca cgagaaaagc ggctgcaccg aatgccagcg ctcccaagcc aacgtctcgt
     6661 ctgcgaagcg cgccggcagg ctgttcttgt ccttcggcgc catcgggtct cctttcgatc
     6721 aaatggctaa tccctgagtc acacagacgg cagattgtcg tctccgagcc gattgtgacg
     6781 gggcctaatc actcgacgta gcgcgcggtg ttgaatggtt cgatcatcgt cactcttgag
     6841 ctgcgtcgat tcgagcttgg cgatggccag aagctgctag cgcttcgctg tagtgtcctg
     6901 caccggttcg agtttgaagg tgagcttgtc gatcttgccg gtgaacttga acggaacatc
     6961 gtagcggtac tcaaccatcg cgactccggt gcgggtgtcc tggccgacgt cgaaggtttc
     7021 gtcctccggg aacgtgaccg gggtggtgtg ctccagggag ttcttggcca cttcctttcc
     7081 gtccacgtac agcaggcccg tgccgccttt gcccaaaccc ggaccgtcgg atttgaagtc
     7141 gaagacgatg gtgtgcttgc cggtttccaa ctcaggccct tcccacgtag tgcgcttgag
     7201 gtcgagcagg ttatagagga acaccacctt gccccggccg atgccgaatt cgcccttgct
     7261 caggaacagg ccgtagccgc cgaagcggcc gccctcggta acgatcatgc cttctgcgcc
     7321 acctgcggga atctcaacct ccgccgtgat ggtgtaggac ttattcagga tgctcggcgc
     7381 agcgctggcc ggcacgcctg tcagttcgcc cgaatacgtg aactccgttc gccccgccgt
     7441 caggctcgga cgcggcgtgt tccagcgcgc gagcgttgaa ttgtcgagcg gcagcacgtt
     7501 gtacttcttc gcctcggagt agaagaggtc ctgcatctgc ttgagcttgt ccggcatctt
     7561 ggcggcgagg tcgttgaact gggtcgggtc ctcattgacg ttatagagtt cccaattgta
     7621 cccggtgatc acatccgggg gcgtagccgt actcagctcc cacgggagag tcgctggcgt
     7681 cgtcgccgcc atccacccgt catgatagat ggcgcgattg ccgagcatct cgaagtattg
     7741 tgtcgtgtgg cgagtggttg cgttggcgtt cgtcttgtcc cacgtgtacg ccatgctcac
     7801 gccttcgatt ggaagttgct tgatgccgtt gatcgtatcg ggttgcggaa tgcccgtcgc
     7861 ttcgagcacg gtcgggacca cgtcgatcac gtgatggaat tggcggcgga taccgcccgc
     7921 atcgttgata tggccgggc
//
LOCUS       DATILV010000797         3553 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_964459, whole genome shotgun sequence.
ACCESSION   DATILV010000797 DATILV010000000
VERSION     DATILV010000797.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3553)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3553)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3553
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_964459"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..276
                     /locus_tag="VLJ17_19390"
     CDS             <1..276
                     /locus_tag="VLJ17_19390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25181.1"
                     /translation="TIYLGITQDRPRTWTRAGRANSAVFKSTDGANWQLLTEKMSGGV
                     TDITPAADDDAVLIATADGEVVALNSTGESRTIIGGLPCITAMALGA"
     gene            complement(350..829)
                     /locus_tag="VLJ17_19395"
     CDS             complement(350..829)
                     /locus_tag="VLJ17_19395"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013756.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HSV25182.1"
                     /translation="MAIEPQELRRVMGHFATGVTVITTKDQGGNPNGLTANAFMSLSL
                     NPPLVLISVDKGATCYGCFGLQNGFTVNFLSEDQEEISRRFATKGADKFADLKWQPGS
                     NGAAIIEGVMGYVECVITESHDGGDHTIVVGEIVNAGATGERPLLFFKGKYQRLPAD"
     gene            971..1525
                     /locus_tag="VLJ17_19400"
     CDS             971..1525
                     /locus_tag="VLJ17_19400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25183.1"
                     /translation="MAVQERKAENSLDRYIAEIRAAWGDGKDPRLPFRVATLMEKLFA
                     STSPDDPWMAELIRDGKPSRELYRDPELGFIQMGHIHKQGHGNKPHDHGPCWVVYGSF
                     KGVTEITKYKRTDDGAQPGVATLERERLDRLTPGVVMPYLPGDIHSTNAVEGPGVVFR
                     FLSYDLEKIDRYRYNPEKATVAKV"
     gene            1552..2265
                     /locus_tag="VLJ17_19405"
     CDS             1552..2265
                     /locus_tag="VLJ17_19405"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSV25184.1"
                     /translation="MAGEEIFFEQIRSAGCLSYLLGCTKEKICVVIDPEIDKADDYVG
                     LTDFLKAKLLYAIDTHTHADHNSACKIMRERYGIKVIMHRATDAPYIDLRVDDGDEIQ
                     FGQQALKIVYTPGHTQDAMCLLFKDRIFTGDTLLIGGCGRTDLPGGNAEAQYESLAKL
                     KTLGDQIRVYPGHDYREAVSILGDEKQNNARMLISSKEEFVHFMTSRKPPLPRKIQEA
                     LEWNRTPIQGTQRGMGEGI"
     gene            2400..>3553
                     /locus_tag="VLJ17_19410"
     CDS             2400..>3553
                     /locus_tag="VLJ17_19410"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0043138 - 3'-5' DNA helicase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecQ"
                     /protein_id="HSV25185.1"
                     /translation="MPASNTFSIDDILATVRRYWGYSELRPLQEQAINAGLEQRDSLV
                     VLPTGGGKSLCYQVPPELGQRTDLVVSPLISLMKDQVDGLRECGYPAAALYSGPPEYE
                     LREIEEQFLAGRYRLLFVAPERLLAPRFLQLIERVQVRAFAIDEAHCISHWGHDFRPE
                     YRRLAEIKSRFAKASIHAYTATATERVRADIVQQLKLTNPAVLVGTFDRPNLVYRIVP
                     RIDARAQVREILQRHHRQAAIVYCISRKDTESMASFLQANGLRAAFYHAGMDADERRR
                     TQDDFASEALDVVAATVAFGMGIDRSDVRCVVHAAMPKSIEHYQQETGRAGRDGLEAE
                     CVLLYSAADVLRWESLIEKSAAEADASTEIIAASRELLEHMRRLCSGVHCR"
BASE COUNT          790 a         1038 c          991 g          734 t
ORIGIN      
        1 acaatttatt tagggatcac gcaagatcgg ccacggacat ggacacgcgc ggggcgagcg
       61 aatagcgctg tctttaaatc gaccgatggt gcgaattggc aactgctcac agaaaagatg
      121 tccggcggcg tcaccgatat cacgcccgca gccgacgacg atgccgtgct gatcgccaca
      181 gcggacggcg aagtcgttgc attaaattcc accggcgaaa gccgaacgat tatcggcggg
      241 ctgccgtgca tcacggcaat ggcgctggga gcgtaaactg tctcgtgttt ggagtcgggg
      301 gtcttgggtt gctcgcagac tccggacgcg aggccaaaac cgccgcggct tagtcggcag
      361 gcaggcgctg atattttccc ttgaaaaaaa gcaacgggcg ttcacccgta gcgccggcgt
      421 tgacaatctc tccgaccacg atggtgtgat cgccgccatc gtgggactcg gtaataacgc
      481 attcgacata gcccatgaca ccttcgatga tcgcggcgcc attgctgccg ggttgccact
      541 tcaaatctgc aaatttgtcc gcccctttag tggcaaagcg ccgagaaatc tcctcttgat
      601 cttcgctcag aaaattaacc gtaaacccat tttgcagtcc aaagcagccg taacaagtcg
      661 cccctttgtc cacgctgatc agcacgagcg gcggatttag cgatagcgac ataaaagcgt
      721 tggcggtgag gccgttcggg ttgccgcctt gatccttggt tgtgatcacc gtgactccgg
      781 tcgcgaagtg acccatcacg cggcgcaatt cctgcggttc gattgccata acttgtctcg
      841 atcacctcta aagttttaca acaggtaaca gagcccgcct cactctgtca atgcgctggc
      901 tattttccgg tcgcgctgga cgagcgcgcg cgtaacatgg taaaaatcgc catacggacg
      961 gaggtgaaat atggccgtgc aggaacgcaa agcggaaaat tccttggatc gttacatcgc
     1021 cgaaattcgc gctgcttggg gcgacggcaa agatccccgg ttgccgttca gagtggcgac
     1081 gttgatggaa aagcttttcg catcgacgag cccggacgat ccttggatgg ccgagctgat
     1141 tcgcgacggc aaaccgtcgc gcgagttgta tcgggatcct gaattgggat ttatccagat
     1201 ggggcatatc cataaacaag gccacggcaa caagccccat gatcatggcc cctgttgggt
     1261 cgtgtacgga tcgttcaaag gcgttactga aatcaccaaa tataaacgca ccgacgacgg
     1321 cgcgcagccg ggcgtcgcca ccttggaaag agaaagactc gaccgtttga cgcccggcgt
     1381 ggtgatgccc tatcttccgg gcgatattca ctcgaccaac gcggtcgaag gtcccggagt
     1441 cgtgtttcgc ttcctgagct atgacttaga aaagatcgac cgctaccgct acaaccctga
     1501 aaaagccaca gtcgcgaagg tttaaaggca gcgaatccgg aatgcgtaat tatggctggt
     1561 gaggaaattt ttttcgagca gattcgctcc gctggttgct tgtcctatct cctgggatgc
     1621 acaaaggaga aaatctgcgt cgtcatcgac cccgagatcg acaaagcgga cgattacgtc
     1681 ggattgaccg atttcctcaa agcgaaattg ctttacgcca tcgataccca cacgcacgcc
     1741 gaccacaatt cggcgtgcaa aatcatgcgc gagcgctacg gcataaaagt catcatgcat
     1801 cgagcgacgg acgcgccgta tatcgatctg cgtgtcgacg acggcgatga aatccaattc
     1861 ggccaacaag cgctcaagat cgtctacact cccggccata cccaggacgc catgtgcctg
     1921 ctcttcaagg atcgaatttt taccggtgat actctgctaa tcggcggctg cggacggacg
     1981 gatttgcctg gcggcaatgc tgaagcgcaa tatgaaagcc tggcaaaact caaaacactc
     2041 ggcgatcaaa tccgtgtgta tccgggtcat gactaccgtg aagccgtatc aattctcggc
     2101 gacgagaaac aaaataatgc gcgaatgctg atctccagca aagaggaatt cgtccatttc
     2161 atgacttcgc gcaagcctcc cctcccccgc aaaatccagg aagccctcga atggaaccgc
     2221 acgccgatcc aaggcacaca acgaggtatg ggagagggga tttgaacagt caccaattga
     2281 ggatgtcgct ttacttgtgc acgaagtcgt gaatctccct tcgacaccga cgaggttctg
     2341 gccgttacgc tctctatccc acgaatccct attgcctgct gcctcttgag tttctgcaaa
     2401 tgcccgcatc gaacaccttc tcgatagacg acatcctggc caccgtccga cgttactggg
     2461 ggtattccga gctccggcct ctgcaagaac aagccatcaa tgcaggattg gagcaacgcg
     2521 actcgctcgt cgttttaccg acgggcggcg gcaaatcgct atgttatcag gtcccgcccg
     2581 agctagggca acgaaccgac cttgtcgtgt cgccgctgat ctctttgatg aaggatcaag
     2641 tcgatggtct gcgcgaatgc ggctatccgg ctgcagcact ttatagcggt ccgccggagt
     2701 acgagctgcg cgagattgaa gagcagttcc ttgccgggcg ctatcgcctt ctgttcgtgg
     2761 cgcccgagcg actgctcgcg ccccgtttcc tgcagctcat cgagcgcgtg caagtgcgcg
     2821 ccttcgccat tgacgaagcg cattgcatca gccactgggg gcatgacttc cgccccgagt
     2881 atcggcgcct ggccgagatc aagagccgtt ttgccaaagc cagcatccat gcttacaccg
     2941 ctacggcgac ggagcgtgtg cgcgccgata tcgtgcagca attgaaattg accaatccgg
     3001 ccgtgctggt cggaaccttc gatcgtccca atcttgtcta tcgcatcgtt cctcgcatcg
     3061 acgcgcgcgc gcaggttcgc gaaattctgc aacgccatca ccgccaggcc gccatcgtct
     3121 attgcatcag ccgcaaggac acggaatcca tggcgtcgtt cctccaggcc aacgggctgc
     3181 gcgctgcttt ttatcacgcc ggcatggacg ctgatgaaag aaggcggaca caggacgatt
     3241 tcgcgtctga agcgctcgat gtcgtggcgg cgacggtcgc cttcggcatg ggaatcgacc
     3301 gcagcgacgt gcgctgcgtg gttcacgccg ccatgccgaa gtccatcgag cactaccagc
     3361 aggaaaccgg ccgtgccggc cgcgacgggt tggaagccga gtgcgtgttg ctctactccg
     3421 ccgccgacgt tctgcgctgg gaatcgctga tcgaaaagag cgccgcggaa gcggatgctt
     3481 ccactgagat tatcgccgcg tcgcgggagc tgctcgagca catgcgccgc ttatgcagcg
     3541 gcgttcattg ccg
//
LOCUS       DATILV010000798         3824 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3265106, whole genome shotgun sequence.
ACCESSION   DATILV010000798 DATILV010000000
VERSION     DATILV010000798.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3824)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3824)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3824
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3265106"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..649)
                     /locus_tag="VLJ17_19415"
     CDS             complement(<1..649)
                     /locus_tag="VLJ17_19415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007600613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HSV25186.1"
                     /translation="MANRFTAAQPTAAMRRWGPPAIVALATMAALTALTAGAAAREAR
                     PAPAQATAPRDAGEPIIAIVSIKSQQVTFYDADGWILRAPVSTGITGRETPAGVFAVV
                     EKNKDHYSTLYDDAWMPNMQRITWNGIALHGGPLPGYAASHGCVRMPYDFAEKLFHKT
                     WIGMRVIISPNDAAPVEFSHPALFMPNAEAVAAARTRAETLAREAAESAKTADEAR"
     gene            1049..2059
                     /locus_tag="VLJ17_19420"
     CDS             1049..2059
                     /locus_tag="VLJ17_19420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007821719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding alcohol dehydrogenase family
                     protein"
                     /protein_id="HSV25187.1"
                     /translation="MRAVGYFAPGPIAAPDSLRDIELPRPSATGRDLLVEVRAVSVNP
                     VDYKVRASAPAPEGAAKVIGWDAAGIVVEAGSQVTLFKVGDEVFYAGSIARPGTNAQF
                     HLVDERIVGHKPRSIGFAQAAALPLTAITAWEALFDRIDIRRPVPGAAPAVLIIGGAG
                     GVGSIAIQLARALTDLTVVATASRPETMAWVKELGAHHVIDHRKPIAPEVAALGIGPP
                     GFVFSITHTADHLKDIAELIAPQGRLALINNESLELASFMRKSVSIHWESMFTRSLME
                     TADMAEQHALLEQVADLVDAGKIRTTIAENFGTINAANLKRAHAFLETGKARGKVVLE
                     GF"
     gene            2223..2573
                     /locus_tag="VLJ17_19425"
     CDS             2223..2573
                     /locus_tag="VLJ17_19425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25188.1"
                     /translation="MYISSICCDDWIGLSSEDKTIENPTWADVEAAIRALDGERRTVV
                     ALEGEGEKHLCVGGGSLGRYCIYATFDNERFFTLAFGDQPETVVMLNVGARRAIIPAI
                     RRHRDGACRLQNVC"
     gene            complement(3036..3578)
                     /locus_tag="VLJ17_19430"
     CDS             complement(3036..3578)
                     /locus_tag="VLJ17_19430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25189.1"
                     /translation="MNSIIKNIYSCAILGMLTVGSVAGSVTSTNAQEFCRTITVPIAS
                     IRAWHLPHEGTGDTEMAGHNPRITIRANVSREGPRLILTGTVEMREAVEDFTTFLGTF
                     MRTVFDADLEAPGCTYREFISRSGSLDADSGEDNHKWTLYENGNGIVRAANCLSDTAG
                     DDAGRLGCTIEFDEITVALK"
BASE COUNT          766 a         1167 c         1150 g          741 t
ORIGIN      
        1 tcctcgcctc gtcggccgtc ttcgcagact cggcggcctc gcgggcgagc gtctcggcgc
       61 gcgtccgagc agccgcgacg gcctccgcgt tcggcatgaa taacgccggg tgcgaaaact
      121 cgaccggggc cgcgtcgttc ggcgagatga tcacccgcat cccgatccac gtcttgtgga
      181 acagcttttc cgcaaaatcg tagggcatcc gcacgcagcc gtgcgaggcc gcatacccgg
      241 gcagcggccc gccgtgcaga gcgatgccat tccaggtgat gcgctgcatg ttcggcatcc
      301 aggcatcgtc atagagggtc gaatagtgat ccttgttctt ctcgacgaca gcgaagacgc
      361 cggctggcgt ctcgcgtccc gtgatgccgg tcgacaccgg cgcgcgcagg atccagccgt
      421 cggcgtcgta gaaagtgact tgctgggatt tgatcgacac gatcgctatg atgggctcac
      481 ctgcatcgcg cggcgccgta gcctgtgcgg gggcggggcg cgcctctctc gccgcggcgc
      541 cggcggtcag cgccgtcaat gcggccatcg tcgcaagcgc cacaatagcg ggaggccccc
      601 aacgccgcat cgctgcggta ggttgcgcgg cggtaaatcg atttgccatg ccatgccccg
      661 gttgagatgc ctgtccgagc ttaagtggag caaatgtcag attgcgattt ttggaaccgc
      721 cgccatccac gccaatttgc tgagactcgg cacgttccca tggtaagtct ctcatatacg
      781 acagcgcgcg caggaggaag cgctagctcg cggctgaaat tgagctgaat gcgaaatccc
      841 gacgggccgc caaacagtct gcttctctgg gtagaaccgg aaaccgcaaa gccgcccgtc
      901 caaacgacgc tttgtcgcaa atgccgccca gcaaaatcaa aatcgggcga tgacaattct
      961 cgcgattcac gcgtagaaga caagccaccg gcctcctccg ccccgtatcg cagcggcggg
     1021 accgcattcc tcgagcacgg aggatcacat gcgcgctgtt ggatatttcg cccccggccc
     1081 gatcgcggcc ccggacagtc ttcgcgatat tgagctgccg cgcccgtcag ccacgggacg
     1141 cgacctcctg gtcgaggtgc gcgccgtttc ggtgaacccg gtggattaca aggtgcgcgc
     1201 ctccgcgccg gcgcctgagg gagccgcgaa agtaatcggc tgggatgcgg ccgggatcgt
     1261 cgtcgaggcg gggtcgcaag tcaccttgtt caaggtcggc gacgaggtgt tttatgccgg
     1321 cagcatcgcc cgccctggca ccaatgcgca gttccatctg gtcgatgagc gcatcgtcgg
     1381 ccacaagccg cgctcgatcg gctttgcaca ggccgccgcg ctaccgctga ctgcgatcac
     1441 cgcctgggag gcgctgttcg accgcatcga cattcgcagg ccggtgccgg gcgcagcccc
     1501 cgccgtgctc atcatcggtg gcgccggcgg ggtcggatcg atcgcaatcc agctggcgcg
     1561 cgcgctcacg gacttgaccg tggtggcaac ggcctcgcgg cccgagacca tggcgtgggt
     1621 caaggaactc ggcgcccatc acgtcatcga tcaccgcaag cccatcgcgc cggaagttgc
     1681 tgcattgggg atcgggccgc cgggtttcgt gttctccatc acccacacgg cggaccacct
     1741 caaggacatt gccgagctca tcgcgcccca gggccggctc gcactcatca acaatgaatc
     1801 gcttgagctt gcgtcgttca tgcgcaagag cgtgtcaatc cattgggagt cgatgttcac
     1861 gcgctcactg atggagactg ccgacatggc cgagcagcac gcgctgctag agcaggtcgc
     1921 ggatctcgtc gacgcgggga aaatccgcac cacgattgcg gagaacttcg gcaccatcaa
     1981 tgcggcaaac ctcaagcgcg cgcacgcgtt cctagaaacc ggaaaggcgc gcggcaaggt
     2041 cgtgctcgaa gggttctagc tagattgtgg ggggcatgcc cccacaagtt tgtcgccccc
     2101 tcccaagctt gcggagaggc gccgagcccc tcggccatcc cgcgcgaaaa cgtcgcgctc
     2161 agatcccggc ttgtctgcga gcgaggcgcg ggagccgagc gagctacgat tggaggcctg
     2221 gtatgtatat ttcttcgatc tgctgcgatg actggatcgg cttgtcgagc gaagacaaga
     2281 cgattgaaaa tccgacctgg gcggatgttg aggctgctat cagagcattg gacggagaga
     2341 ggcgcactgt ggtggccttg gagggcgagg gcgagaaaca tttgtgtgtt ggaggtggct
     2401 cactcgggcg ctactgcatt tacgccacat tcgataacga gcgctttttc acgcttgcct
     2461 tcggcgacca acccgagacc gtggtcatgc tgaatgtggg agccaggagg gcgattatcc
     2521 cagcaatacg tcgacatcgc gacggtgctt gtcgcctcca aaacgtttgc tgaaaccggg
     2581 aaaatagatg ccaacctgag atggttgaac gacgaggaaa gccgacggtg ccgtcgagcg
     2641 atgcatccgt agccgtgctt cggcggtcgg acccggtttc agtcggcgcg gcgcagctcg
     2701 gaccgatcca tacggatgag gacaagttcg ccatcgtagg acttacaaga agcgattgcc
     2761 gattggatcg ccttttacaa caaccgcgcc cctcgccggg cgctcagcca tcgcaccccg
     2821 atggcgatct ggcgcaacgg caccgccgcg aaggctgtgg acatgatgga caacgcaaga
     2881 gcgttgccca catgcccaca gccccaacaa tagcagcaga cagacttcct tgcagcatgc
     2941 gatcaggaga tcgcaacggc gaggtttcca attaagaaag cggtcccggt ggttctaccg
     3001 gtggggctca cttcgttgcc aaaaagggcg ccaagctatt tgagcgccac agttatttcg
     3061 tcaaactcga tagtacagcc caagcgacca gcatcatcac cggcagtgtc actcaggcaa
     3121 ttggcagccc taactatgcc gttcccattt tcatacagcg tccatttatg gttatcctca
     3181 cccgagtccg catcaaggct accgcttcta ctaatgaact cacgataagt acagcctggc
     3241 gcctctagat cggcgtcaaa gactgttctc ataaatgtcc caaggaaagt tgtaaagtct
     3301 tcgacagcct ctctcatttc caccgtgccc gtgaggatta atctcggacc ttcgcgactt
     3361 acatttgctc gtattgtgat ccgagggtta tgcccggcca tctctgtatc gcctgttcct
     3421 tcgtggggta agtgccaagc gcgaatggaa gcgatcggaa cagttatagt ccggcagaat
     3481 tcttgcgcat tggtacttgt gacactgcct gctacagaac caacagtaag catcccgaga
     3541 atagcgcacg agtaaatatt tttaataata ctgttcattt tagatctcct taccggccga
     3601 ggccatcaag cactgctccc ggcgggagca cgtcgtgctc gatcgctttg gcggctccgg
     3661 cactagcacg gaccggacga actaagtgtg attcgggtca cagagctccg ctagtgcgag
     3721 ccactgggta gaaatgaccg ggggttcttg ggtcatcgat acgtccggat atgattttcc
     3781 ggaaggacag attccgcaat gctcaatgcc ttatgctttg cggt
//
LOCUS       DATILV010000799         3140 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3772328, whole genome shotgun sequence.
ACCESSION   DATILV010000799 DATILV010000000
VERSION     DATILV010000799.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3140)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3140)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3140
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3772328"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..383)
                     /locus_tag="VLJ17_19435"
     CDS             complement(<1..383)
                     /locus_tag="VLJ17_19435"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV25190.1"
                     /translation="MNPANVAAVAELLSRVEALLQRPTDVRETVLSVGSLQLDLVTRT
                     VSRNGRTINLLPREFRLLAYLMRRQGQLVTRAMLFREVWKYKFVPESNLVDVHIGRLR
                     RKIDRSEKAPMIYSIRGQGFVLHAPA"
     gene            complement(499..666)
                     /locus_tag="VLJ17_19440"
     CDS             complement(499..666)
                     /locus_tag="VLJ17_19440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25191.1"
                     /translation="MVDTKTVIQTVADHKGDDDIFAYQASDDSMELAADVERLGAVTL
                     AFCSGLDTCPS"
     gene            complement(972..1703)
                     /locus_tag="VLJ17_19445"
     CDS             complement(972..1703)
                     /locus_tag="VLJ17_19445"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HSV25192.1"
                     /translation="MMWADDLSDPRELRNYIRDLIALSALPATWKAYEPQRIAESVAA
                     AMIAMLSPDFVYVSLPGASNHPSGEVTHVNPQMTLGLVNATKRILRTTELGTSEQTIT
                     DPSGGDQLWIVSAPIGSGGTLVAGSLRPGFPSNKDRLLVASAASEITIALNLLQSSSS
                     QSVSTDRSKEVADAVARVKELSPRGRQILEALTSGHANKVIAYDLGISERTVEVHRAR
                     MMKQLGVHHLSEAIRIALLAGWRTA"
     gene            1927..2568
                     /locus_tag="VLJ17_19450"
     CDS             1927..2568
                     /locus_tag="VLJ17_19450"
                     /inference="COORDINATES: protein motif:HMM:NF025774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MEDS domain-containing protein"
                     /protein_id="HSV25193.1"
                     /translation="MKQISKTVSIGRTLQSCPCHACAFFTSKEEEYRVMLPFMAEGFK
                     AGDKLVHIIDKSHRDERVARLSQAGIDVETAEQNGQLELLPWEKAHLVDGCFDQHRML
                     AGFEKRFAADTERYEATRLWSNQEWALKDLPGVLDIIEYESRFNLIWPKYQDITVCVY
                     DATKFSAEVMMGMMRTHPLVIVDSEARPNPFYVPPEELLKELRSYKPTRLKTL"
     gene            2596..2727
                     /locus_tag="VLJ17_19455"
     CDS             2596..2727
                     /locus_tag="VLJ17_19455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25194.1"
                     /translation="MIKINAAPGAREYIRVAQVKAAEDGKELARSSKHIGGMASQIF"
     gene            2768..2905
                     /locus_tag="VLJ17_19460"
     CDS             2768..2905
                     /locus_tag="VLJ17_19460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25195.1"
                     /translation="MPVIADRGLADDAARRQLADAILLFAEDDRSAAEIAKGALQKLG
                     V"
BASE COUNT          691 a          854 c          886 g          709 t
ORIGIN      
        1 gcaggtgcgt ggagaacgaa tccttggccg cgaatactgt agatcatcgg cgctttttcg
       61 gatcgatcga tcttacggcg aagtcgccct atgtgaacat caacgagatt ggattcaggc
      121 acaaacttat atttccaaac ttccctgaag agcatcgctc gagtcaccaa ttgaccttga
      181 cgtcgcatca agtatgccag caggcgaaat tcgcgcggca gcagattgat cgtacggcca
      241 ttacggctga cggtgcgcgt cacaagatca agctgtaacg aaccgacgct tagcactgtc
      301 tctcgaacat cggtggggcg ctgcagcagc gcttccactc tcgaaagcag ttcggcgacc
      361 gccgcaacat ttgccggatt catgtcgcgt tccctcgcgt gcgaggtctc gtgatattcg
      421 gtcacgttca ttttagtttc tcccttggtt tcccctctta ggtgttcggt tagcgagaat
      481 gcccgtttag gacgtgactc aggacgggca cgtatccagg ccgctacaaa aggcgagcgt
      541 aacggctccc agcctttcga catcagcggc gagctccatc gaatcgtccg aagcctggta
      601 agcaaaaatg tcatcatcgc ctttgtggtc ggcaactgtc tgaatgactg ttttggtatc
      661 caccatcgca ccgctccttt cgtcgagtat ggtgtctcac ccctacacgt tgcatacgtt
      721 cgcgatcgat ccccttcaat taagggaatc ccacatgcaa ttaagggaaa tccacattgc
      781 gctcggcgag gatgtggcga acgcaagtga tcagaagagg attggcaagg tcgaggaacg
      841 cacctggttt ttgttttaag gcggatgtag cggagcgact ttagtgcacc tgtgcgcgca
      901 cgctggcctg gtccgccgcg ccccgccaat gctccggcga gacccttcac gaactgaaaa
      961 tggtcgtcac ctcatgcggt ccgccacccc gccaataggg caatccggat agcttcggaa
     1021 aggtgatgga cgcccagctg cttcatcatg cgcgcgcgat gcacctcgac tgtacgctcg
     1081 ctgataccaa ggtcgtatgc gatgaccttg ttcgcatggc ctgacgtcag ggcctcaaga
     1141 atttggcgcc cgcgcggact cagttccttg acgcgagcta ccgcgtcggc aacctctttg
     1201 ctgcgatcag tcgatacgct ttggcttgat gaagattgca agagattcaa tgcgattgtg
     1261 atttcactag cagcagaggc cacaagcagt cggtccttgt tgcttggaaa accgggccga
     1321 agcgatccgg ccaccagcgt gccgcccgag ccgatcgggg ccgaaacaat ccaaagttgg
     1381 tcccctccgg aagggtcggt gatcgtctgc tcggaggtcc ctagctcggt ggtgcgaaga
     1441 atgcgcttgg tcgcgttcac taggcccagt gtcatctggg gattgacatg ggtgacctcc
     1501 cccgatggat ggttcgacgc gccgggcaag gagacgtaca cgaagtcggg gctgagcatt
     1561 gcaatcatgg ccgcggccac gctctcagca atccgctggg gctcataggc cttccaggtc
     1621 gcaggcagcg ccgaaagtgc aatcaaatcg cggatgtagt tccgcaattc tcgtggatcg
     1681 gaaagatcgt ccgcccacat catggctcgg aactccgtgc acgcactcta gacaaattgt
     1741 tcgaaagtac ctgagttccc tacctgatac ctgagttccc tacctagtac gtaagttcct
     1801 agctagcgcg tgagttccgt acctagtatg tgagttccta gctagtacgt gatttccgta
     1861 attgtctttg tacctcgatc tgttcgatag tgacaatgac ttgtttccca gcgagtgggt
     1921 tgcgccatga aacagatcag taagactgta agcatcggtc gaacgctgca atcgtgcccc
     1981 tgtcacgcct gcgcgttctt caccagtaag gaagaagagt accgcgtaat gctgccgttt
     2041 atggccgagg gtttcaaggc cggcgacaaa ctggtgcata tcatcgacaa aagccaccgt
     2101 gacgaacgag tagcgcgcct cagtcaggct ggaatcgacg ttgagacggc tgagcaaaac
     2161 ggtcagctcg aattgttacc gtgggagaag gcgcatctcg tcgacggttg ctttgaccag
     2221 catcgtatgc tggccggctt cgagaagcga tttgccgcgg acactgagcg ctatgaagcc
     2281 acacggctgt ggtcaaatca ggaatgggcg cttaaggatc tgccaggtgt attggacata
     2341 atcgagtacg agagtcggtt caatctgatc tggccgaaat accaagacat caccgtttgc
     2401 gtctatgacg ccaccaagtt cagcgctgag gtgatgatgg gaatgatgcg cacacatccg
     2461 ctcgtcatcg tggattccga ggcgcggccg aatccatttt atgtgccgcc ggaggaactg
     2521 ctcaaggagc tgcgttccta caagccaact aggctcaaaa ctttgtagta gtgcctgtgt
     2581 aagagtgccg tggggttgat caagatcaat gccgcccctg gggcgcggga atatatacgc
     2641 gttgcacaag taaaagctgc tgaagacggg aaagagcttg caagatcatc aaaacatatc
     2701 ggcggtatgg cttcccagat cttttgaccg cctgttccag gcgtttgaca tcgcttggcc
     2761 aatactgatg cccgtcatcg ccgatcgtgg gcttgccgat gacgcagcgc ggcgccagct
     2821 tgcggatgcg attctcttgt ttgccgagga tgaccgcagc gctgcagaga tcgcgaaagg
     2881 ggcgctacag aaactcggcg tctaattgct gtctaattgc tcggcatgca tgcagcccag
     2941 gaagttttca gggcccaaca gttggcgcgc caaaactgga ctacgtgcgc ccagtgcgga
     3001 gtgattagtc ggctgatgag ctggaggcga tagtcatctc gaacacctcg cctagtgcga
     3061 tcagggggta atctcgtcga tgacaaccgc gttcggtggc cgcgccagaa aaaccttgtt
     3121 cttgcctttc acatatttta
//
LOCUS       DATILV010000800        11400 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3005277, whole genome shotgun sequence.
ACCESSION   DATILV010000800 DATILV010000000
VERSION     DATILV010000800.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 11400)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11400)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11400
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3005277"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(50..1156)
                     /locus_tag="VLJ17_19465"
     CDS             complement(50..1156)
                     /locus_tag="VLJ17_19465"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003871 -
                     5-methyltetrahydropteroyltriglutamate-homocysteine
                     S-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HSV25196.1"
                     /translation="MTARTKPPFRADHVGSFLRSAPLKEAREKAAKGEITATQLKAVE
                     DEEVPKIIAKQEELGLKLATDGEYRRSWWHFDFFGMLDGVEIYEAGHGIQFQGIQTKP
                     LSIRVIGKIGFSNHPMLEHFRFLKAHTRVMPKMTIPSPSVLHFRLEPGAVSTDAYPSR
                     DAIFDDLGAAYQKAVRAFYDAGCRYLQFDDTAWAYLCSDVELKKARDRGLDVDHLQES
                     YARTINKALEAKPADMTITTHVCRGNFRSTWISSGGYEPVAKNLLANCNYDGYFLEYD
                     SARAGGFEPLRFLPKGDKIVVLGLITTKVGTLEDKAEIKRRITEATKYVALEQLALSP
                     QCGFASTEEGNVLADSEQWAKLRMTLDVAQEVWG"
     gene            complement(1299..2036)
                     /locus_tag="VLJ17_19470"
     CDS             complement(1299..2036)
                     /locus_tag="VLJ17_19470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012497363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV25197.1"
                     /translation="MAELLNLDRLKAGYGEAVVLAEISLQLDRGQSLALLGRNGMGKT
                     TLINSIVGVTRYRSGTIHLDGRDITKLPPERRALAGVGWVPQERNIFRSLTVHENLTA
                     VALPGLWTPQKVYAMFPRLGERKANLGNQLSGGEQQMLAVGRALVLNPKIMLLDEPLE
                     GLAPIIVEELLAALNRIIRQEGMSAILVEQSPQKILSVTDRAVILERGAIVYEAASAT
                     LRDDRTVLEAYLGVTDQTPRRGVRNAQ"
     gene            complement(2029..2799)
                     /locus_tag="VLJ17_19475"
     CDS             complement(2029..2799)
                     /locus_tag="VLJ17_19475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012497364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV25198.1"
                     /translation="MTMATAEIPVLETKNLDKRFGGIVAASAISVAIRKGARHALIGP
                     NGAGKTTFVNLLTGMLRPSGGEILLDGAPITNLEPHERVRLGIARTFQINQLFADLTP
                     IETLGLAISERHGSGRDWWRIVGSRAGVTAEVSELLERFRLVDVMTERTAILPYGKQR
                     LLEIALAFACRPRVLLLDEPAAGVPEAERHEILATIAALPADVTVLLIEHDMDIVFSF
                     ADRISVLVNGELFVEGPPDEVARDPRVKAVYLGEAHDG"
     gene            complement(2796..3815)
                     /locus_tag="VLJ17_19480"
     CDS             complement(2796..3815)
                     /locus_tag="VLJ17_19480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011502009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSV25199.1"
                     /translation="MSRTVETAVTRFLAARAHFGPFEIAFWLVAFATVYFLPSRHLIL
                     TETAIWGLFALSLDLILGYAGIISLGHAAFFGVGAYAAGLLAKHEIIVEPSIALLAAG
                     LAAAALGFATSFLVLRGSDLTRLMVTLGVALVCFELANKFGELTGGADGLQGITMAPV
                     LGVYRFDMFGHTAYIYTLVWLFVLFVLARRVVNSPFGLSLKAIKGNALRSSAIGIAVN
                     WRLVAIYTLSAAYAGIAGGLLAQTQAFASLSMLSIERSADGLLILIIGGTGYLYGGLI
                     GALIYRLLQDYLSDLTARYWQFWIGLLLVAIVIVGRERIGGWIYFLERQVMRVFRRSV
                     PDRGA"
     gene            complement(3830..4729)
                     /locus_tag="VLJ17_19485"
     CDS             complement(3830..4729)
                     /locus_tag="VLJ17_19485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018317415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSV25200.1"
                     /translation="MLTILFDGVAYGMLLFVLACGLAVTLGLMNFVNLAHGAFAMAGG
                     YITVVLVNRAGLPFVAGLLLAFFAAAAIGAVLERTLYVHVYAKSHLDQVLFTIGLVFM
                     SVAAVDYVMGSSQQFVQIPAALRGQFDVFGVGVGRYRLLIIVVCGLLTVALQLVLTGT
                     RFGSRLRAAVDDQRVARGLGINVGAVFAITFAVGSGLAGLGGALGAEILGLDPTFPLK
                     YMIYFLIVVTVGGTSSITGPFLASILLGIADVAGKYYGGHNLKIGEIVVPIPDIGAFV
                     IYTIMIVVLILRPQGLFARGTAK"
     gene            complement(4889..6058)
                     /locus_tag="VLJ17_19490"
     CDS             complement(4889..6058)
                     /locus_tag="VLJ17_19490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018317416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV25201.1"
                     /translation="MCKTIATSVAAVVFGIATASAQAQGTVKIGVLLPMTGPQQSTGV
                     QITAAIRLYIAQHGDTVAGKKIQVIAKDDGAVADNSKRLAQELIVNDKVNFVAGFGVT
                     PTAFAVSPLATEAKIPQVVMAAGTSSITERSPYVVRTSFTVAQSCVIMGDWATKNGIK
                     KVVSMVSDYAPGIDAENFFKESFLKGGGQISEFIRAPLANPDFAPFLQRVRDAKPDAV
                     FIFVPAGQGAIFVRQFVERGLDKAGIKIIGPGDVTDDDILNGMGDSVIGTVTAHMYSA
                     AHPSQGNKAYVAAFKQANPNLRPNFMSVGGYDGMHLIYEALKLAGGKTDGDTLIAAMK
                     GMAWDSPRGPMSIDPETRDIIQNVYMRKVEKVGSELYNVEFATFPNVKDPGKIKK"
     gene            complement(6270..7271)
                     /locus_tag="VLJ17_19495"
     CDS             complement(6270..7271)
                     /locus_tag="VLJ17_19495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HSV25202.1"
                     /translation="MTVITAPAGGATAIFGSDMARVLDDDAASIRVLPILGKGPVRNV
                     VDILYLKSIDMGMVTADVPEFYKLQYKISDITTRLRYITKLYHNELHIIARNPIKSIF
                     DLEGKKITAQTDVGLYTARVVFSRLGIKASFDYRTDDNRAIQKVIDGEVDGYITSTGK
                     VFPLARAIKNEDRALHLVSVPYDPRLQDMYLPTTLSGEEYPNLLSPGETIETIAASVL
                     LVSFNWPENTERYNRTARFVDVFFSKMEEFMKPPRHPKWKEASIAASISGWQRFKPAE
                     DWLVRHNMTAMSQQAAVEKIRFEQFLAENRIQASSDPAKLETLFRQFLDWQRRKSVP"
     gene            complement(7730..8686)
                     /locus_tag="VLJ17_19500"
     CDS             complement(7730..8686)
                     /locus_tag="VLJ17_19500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HSV25203.1"
                     /translation="MKICVAGQGAFGQKHLDALKRIADVEVVSLIGGNQDATAEVAKK
                     YGVPHWTGDLGEGIKRADAVILTTPTQMHRRQGEQVMRAGKHVLIEIPIADSVADAEA
                     LVKIQQETGVVAMGGHVRRFNPSHQWVHKRIRNGELKIQQMDVQTYFFRRSNMNAAGK
                     PRSWTDHLLWHHAAHTVDLFQYQTGETVSECFAVQGPPHPQLKIAMDMGIVMKVSSGA
                     ILTLSLSFNNDGPIGSFFRYICDNGTYNAYYDDLFDGKKNQIDLSKVDVSMDGIELED
                     REFIAAIREKRQPNASLAEVLPCMHVLGKIEQIIDPRRQAHA"
     gene            complement(8683..9624)
                     /locus_tag="VLJ17_19505"
     CDS             complement(8683..9624)
                     /locus_tag="VLJ17_19505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class III extradiol dioxygenase subunit beta"
                     /protein_id="HSV25204.1"
                     /translation="MARIIAGVTSSHVPAIGAAIDLKKTEEPYWKRVFSGFEKSKEWM
                     AKTKPDLVIAVYNDHASAFSVELIPTFALGCAAEFPPADEGWGPRPVPVVKGHPALAS
                     HIAQSVILDEFDLTIVNKMEVDHGLTVPLNLMFGSPTEWPCPVIPLAVNVVMYPPPTG
                     HRCYMLGRAIRKAVQSYPEDLRVVIMGTGGMSHQISGPRAGLINSKFDKAYLDGLTRD
                     PKKLARIPHIEYMREAGAEGIEMVMWLIMRGALDDKVKEVYRFYTVPASNTAVGHIIL
                     ENASGSPKGKRPVPTGRHAPKRRAALEAKQVVVRSKR"
     gene            complement(9634..10134)
                     /gene="ligA"
                     /locus_tag="VLJ17_19510"
     CDS             complement(9634..10134)
                     /gene="ligA"
                     /locus_tag="VLJ17_19510"
                     /EC_number="1.13.11.8"
                     /inference="COORDINATES: protein motif:HMM:NF009917.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018579 - protocatechuate 4,5-dioxygenase
                     activity [Evidence IEA];
                     GO_process: GO:0046278 - 3,4-dihydroxybenzoate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protocatechuate 4,5-dioxygenase subunit alpha"
                     /protein_id="HSV25205.1"
                     /translation="MTAAKEAKEKEAKEYDDIPGTFVFDADRSRQGYHLNMFCMSLMK
                     AENRKAFKANEAEYLNRFALTPEQREAILKREYNRMLELGGNIYFTAKLGATDGHSFQ
                     HMAAVMTNSTQDDYAKMMLAGGRSVEGNRSRSGLDVRKKPRARNASAKPAAKSKLRST
                     PKRGKR"
     gene            10288..10551
                     /locus_tag="VLJ17_19515"
     CDS             10288..10551
                     /locus_tag="VLJ17_19515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25206.1"
                     /translation="MSTKRALSLDTVIRRASEPISTPDPDTAALTALAVTVALLRALR
                     DRGLLSEGEIDDLFGEAAERLRDTPALNLLIRVQDDVERKSEE"
     gene            complement(10599..>11400)
                     /locus_tag="VLJ17_19520"
     CDS             complement(10599..>11400)
                     /locus_tag="VLJ17_19520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015668327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV25207.1"
                     /translation="VDAHCHVFGPEATFPYAPERKYTPCDAPKEKLFALRDFLGLDKN
                     VIVQASCHSKDNRAMIDALEASDNRAKGVAFVGGEVTDAELKAMHRAGVRGVRFNFVR
                     RLVDVTPRDVLERIAARVAPLGWHIVVYFEMPDLPDFEAFFTALPTTVVVDHMGTPTV
                     KKGVDDPENQRFIRMLDKHRNIWSKVTCPERMTLAGPPYDDVVPFGRTLVEHFPDRVL
                     WGTDWPHPNAKKEAPDDGVLVDYIPKIAPSAAEQKALLIDNPMRLYWA"
BASE COUNT         2277 a         3425 c         3409 g         2289 t
ORIGIN      
        1 aggctgccga cgtgatcggc acggaaggga gggacggcac gttgcatagt cacccccaca
       61 cctcctgggc aacgtccaat gtcatgcgca gcttcgccca ttgttcgctg tcggcgagca
      121 cgttgccctc ttcggtcgag gcaaagccgc attgcggtga tagcgcgagc tgctcgagcg
      181 ccacatattt agtcgcctca gtgatccggc gcttgatctc ggccttgtcc tcgagcgttc
      241 cgaccttagt ggtgatgagc cctagcacca cgatcttgtc gcccttgggc agaaaccgca
      301 gcggctcgaa gccgcccgcg cgcgcgctgt catattcgag gaaataaccg tcgtagttgc
      361 agttcgccag caggttcttc gcgaccggct cgtagccccc ggacgaaatc catgtcgagc
      421 ggaaattgcc gcggcacacg tgagtcgtga tggtcatgtc ggcgggcttg gcttccaggg
      481 ccttgttgat ggtgcgggcg taggactcct ggaggtggtc aacgtcaagg ccgcggtcgc
      541 gcgccttttt gagttcgaca tcggagcaca gataggccca tgcggtgtcg tcgaattgca
      601 gatagcgaca gccggcatca tagaaggcgc gtaccgcctt ctgataggcg gcgccgaggt
      661 cgtcgaatat ggcgtcgcgg ctggggtaag catccgtgct aaccgcaccg ggctctaggc
      721 ggaaatgcag cacactcgga ctcggaatgg tcatcttcgg catcaccctg gtgtgcgcct
      781 tgaggaagcg gaaatgctcc agcatcgggt ggttggaaaa cccgatcttg ccgatgacgc
      841 ggatgcttaa tggcttggtc tggatgccct ggaactggat gccgtggccg gcctcgtaga
      901 tctcgacgcc gtccagcatg ccgaaaaaat cgaagtgcca ccaggagcgg cgatactccc
      961 cgtcggtcgc aagcttaagg cccagctcct cctgcttagc gataatcttc ggaacctcct
     1021 cgtcttccac cgccttgagt tgtgtcgccg tgatctcacc ctttgcggcc ttttcgcgtg
     1081 cctccttgag cggcgccgag cgcaggaacg agccgacatg gtcggcacgg aatggcggct
     1141 ttgttcgcgc ggtcatggac gtctccctgg gatcttcttg agcgctcttt ccattattga
     1201 gcgcgattgt aaacccatgc gatcgttggg aaagggatgg gaagccgccc aaccaacggg
     1261 ggctcaattc cgcgattctt ccgcatcaac acaaccgatc actgcgcgtt cctgactcct
     1321 cgccgcggcg tctggtcggt gacgccgaga taggcttcga ggactgtgcg gtcgtcgcgc
     1381 agcgttgcgc tcgcagcctc gtacacaatg gcgccgcgtt cgagaatcac ggcgcgatcg
     1441 gtcacgctga ggatcttttg cggactctgc tcaaccaata tggccgacat gccttcctgg
     1501 cgaatgatgc ggttgagggc agccagcagt tcctcgacga tgatgggcgc gaggccctcc
     1561 agcggttcgt cgagcagcat gatcttcgga ttgagcacca gcgcccgccc gaccgcgagc
     1621 atctgctgct cgccgcctga gagttgattg ccaagattgg ctttgcgttc gccgagtcgt
     1681 ggaaacatcg catagacctt ttgcggcgtc cacaatcccg gcaaggccac cgccgtgaga
     1741 ttctcgtgca ccgtgagcga gcggaagatg ttgcgctcct gcggcaccca gccgacgccg
     1801 gcaagcgcgc gccgttcagg cggcagtttc gtgatgtcgc ggccgtcgag gtgaatggtg
     1861 ccgctgcgat agcgggtgac cccgacgatc gagttgatca gcgtggtctt gcccataccg
     1921 ttgcggccga gcagcgccaa cgattggccg cggtcaagtt ggagtgaaat ttcggcaagc
     1981 accaccgctt cgccatagcc ggccttgagg cgatcgaggt tcaacagctc agccatcgtg
     2041 cgcctcgccg agatagacgg ccttgacacg tggatcgcgc gccacttcgt cgggcggccc
     2101 ttcgacgaac aactcgccat tgaccaggac cgaaatgcgg tccgcaaagc tgaatacgat
     2161 gtccatgtcg tgctcaatca agagcaccgt gacgtccgcc ggcaatgccg caatggtggc
     2221 aaggatttcg tggcgctcgg cctcaggcac cccggcggcc ggctcgtcca gcagcagcac
     2281 acgcggccgg caggcgaagg cgagcgcgat ttcgaggagc cgctgcttgc catagggcag
     2341 gatcgcggtg cgctcggtca tgacatcgac aagccggaag cgttccaaca gctcgctcac
     2401 ctcggccgtc acgccggccc ggctcccgac gatgcgccac caatcgcggc cggagccgtg
     2461 acgctcggag atcgcaaggc caagcgtttc gattggcgtc agatcggcga acagctggtt
     2521 gatctgaaag gtgcgcgcaa tgccaagccg cacccgctca tgcggttcca gattcgtgat
     2581 cggcgcgcca tcgagcagga tttcgccgcc cgaaggacgc agcatgccgg tgagcaggtt
     2641 gacgaaggtc gttttgccgg cgccgttggg tccgatcaag gcgtggcggg cacccttgcg
     2701 gatcgcaacc gagatcgcac ttgccgccac aatgccgccg aaccgcttgt ccagattttt
     2761 ggtctccaga acgggtattt ccgcggtcgc catggtcatg cgccgcgatc cgggaccgag
     2821 cggcgaaata cgcgcatgac ctgcctttca aggaaataaa tccagccgcc aatgcgctca
     2881 cgcccgacga tgacgatggc cacgagcagc aaaccgatcc aaaactgcca gtaacgcgcg
     2941 gtgagatcgg aaagatagtc ttgcagcagc cggtagatca gcgcgccgat caagccgcca
     3001 tagagatagc cagtgccgcc gataatgagg atcaacaggc cgtccgccga gcgctcgatc
     3061 gaaagcatgg agagcgacgc gaacgcctgg gtctgcgcca acagcccgcc cgcaatgccg
     3121 gcgtaggcag ccgagagcgt atagatggcg acgagccgcc aattgaccgc gatgccgatg
     3181 gcagaactgc gcagcgcgtt gcctttgatc gctttgagcg ataggccgaa cggggagttg
     3241 acgacgcgcc gcgccaggac aaacagtaca aaaagccaaa ccagggtata gatgtaggcc
     3301 gtgtggccga acatatcgaa acggtagacg ccgagcaccg gcgccatggt gatgccctgg
     3361 aggccgtcgg cgccaccggt aagctcgcca aatttgttgg caagctcgaa gcagaccaag
     3421 gcaacgccaa gcgtcaccat caggcgggtc aggtcggagc cgcgcaatac cagaaagctt
     3481 gtggcgaagc ccagcgcggc tgccgcgagc ccggcggcga gcagtgcaat ggacggctca
     3541 acaataatct catgcttggc gagaagacct gccgcgtaag ccccgacgcc aaaaaaagcc
     3601 gcatggccca gcgagatgat gcctgcatag ccgaggatga gatcgagcga gagcgcgaac
     3661 aggccccaga ttgcggtctc ggtcaggatg agatggcggc tcggcaggaa atagacagtc
     3721 gcaaaggcca ccagccagaa cgcgatctcg aacggaccga aatgtgcgcg cgcagcgagg
     3781 aagcgggtga cggcggtttc gaccgtacgg ctcatggcgg tcctgacgac tactttgcgg
     3841 tgccgcgggc aaacagacct tgcgggcgca ggatcaggac cacgatcatg atggtgtaaa
     3901 tcacgaaggc gccgatgtca gggatgggga cgacgatctc gcctatcttc aggttgtgcc
     3961 caccatagta tttgcccgcc acgtccgcaa tgccgagtag gatcgaggca agaaacggcc
     4021 ccgtgatgct cgaagtgccg ccaaccgtga cgacgatgag aaagtagatc atgtatttga
     4081 gcgggaaggt cgggtcgagg ccgagaattt cggccccgag agcaccgccg agcccggcca
     4141 gtccggaacc gaccgcaaag gtgatggcga atactgcacc gacgttaatg ccgaggccgc
     4201 gcgcgacgcg ttggtcgtcg accgcggcgc gtagccggct accgaagcgc gtgccggtca
     4261 gcacgagttg cagcgccact gtcagcaacc cgcacaccac gatgatgagc aggcggtagc
     4321 ggccgacgcc cacgccgaac acatcgaact ggccccgcag cgccgctgga atctgcacga
     4381 actgctgaga cgagcccata acataatcga ccgctgccac cgacatgaag acgaggccga
     4441 tggtgaacag aacctggtcg agatggctct tcgcataaac atggacgtag agcgtgcgtt
     4501 ccagcacggc gccgattgcc gcggcagcga aaaacgcgag caggagcccg gcgacgaacg
     4561 gcagtcccgc gcgattgacc aggaccaccg tgatgtagcc gcccgccatg gcaaaggcgc
     4621 cgtgagccag attgacgaag ttcatcagcc ccagcgtgac cgccaagccg caggccaaga
     4681 cgaacagcaa catgccgtag gcaacgccat caaaaaggat ggtcagcata gggagccggg
     4741 tgcttctctc ttccctgctc gcgggggaga gttggggagg ggggactttg ccgcgattcg
     4801 atcgcgcgga cctgccccta ccctcccctc gcccgcaagc ggaggagggg aggacaaatc
     4861 gtcgctcgcc cccgttttca ttgcgcgtct acttcttgat cttacccggg tccttcacgt
     4921 tcggaaaggt tgcaaactcg acgttgtaca gctcgctccc aaccttttcg accttgcgca
     4981 tgtagacgtt ctggatgata tcgcgcgtct ccggatcgat cgacatcgga ccgcgggggc
     5041 tgtcccaagc catgcctttc atggccgcaa tcagcgtatc gccgtcagtc ttgccaccgg
     5101 ccaatttgag tgcttcgtaa atcaaatgca tgccgtcata gccgccgacc gacatgaaat
     5161 tgggccgcag gtttggattg gcttgcttga acgccgccac atacgcctta ttcccctggg
     5221 acggatgggc agccgaatac atgtgcgccg tgacagtgcc gatcacggag tcgcccatgc
     5281 cgttgaggat atcgtcgtcg gtgacgtcgc cggggccgat gatcttgatg ccggctttgt
     5341 caaggcctcg ctcgacgaac tgccgcacga atatcgcacc ctggccggcc ggaacgaaga
     5401 tgaagacagc atccggcttg gcgtcgcgga cccgctgcag gaacggcgca aaatccggat
     5461 tggcgagagg cgcgcgaata aattccgaaa tttggccgcc gcccttgagg aagctttcct
     5521 tgaagaaatt ttcagcatcg atgccaggag cataatccga caccatgctg acgaccttct
     5581 tgatcccgtt cttggttgcc cagtcgccca tgatcacaca ggattgcgcc acagtgaagc
     5641 tcgtgcgcac cacatagggc gagcgttcgg tgatgctcga cgtgccggct gccatgacga
     5701 cttgtgggat cttggcctcg gtcgctagcg gggagaccgc gaaggcagtc ggcgtgaccc
     5761 cgaagccagc gacgaaattg accttgtcgt tgacaatcag ctcttgcgca aggcgcttgg
     5821 aattgtcggc gacggcaccg tcgtccttgg cgatgacctg gattttcttg ccggccaccg
     5881 tgtcgccgtg ctgcgctata tagaggcgaa tggccgcggt aatttgtacc ccggtcgatt
     5941 gctgcgggcc ggtcatcggc agtagcacgc ctatcttcac ggtgccctgc gcctgcgcgg
     6001 acgcagtggc gataccgaat accactgccg cgacgctggt cgcgatggtc ttacacataa
     6061 tcctccctcc agatgccttg acttgtttac gcttgcccaa gccgccatcc atgacttctc
     6121 tccgtccgag cgggggcaaa aatatccact gcgacgcacc cggagtcgcc tcgaagctag
     6181 cgcgtgcaat agccggcgcg cgacattagc ggaacacgct acagcgtcaa tcagatataa
     6241 agtttatgct ttatgtgcta aggctaaagc tacggcacgc ttttgcgcct ctgccaatcc
     6301 aggaattgac gaaataatgt ctccaacttg gcgggatcac tgcttgcttg aatccgattt
     6361 tcggcaagga attgttcaaa tcggatcttt tctactgcgg cctgttgcga catggccgtc
     6421 atgttgtgcc ggacaagcca gtcctcggcg ggtttgaagc gttgccatcc agaaattgag
     6481 gccgcaatac tcgcttcctt ccattttgga tgtcgcggcg gcttcatgaa ttcttccatc
     6541 tttgagaaga atacgtccac aaaccgcgcc gttctgttgt aacgctcagt attctcgggc
     6601 caattaaagc tcaccagcag cacgctcgcc gcgatcgttt cgatcgtctc acctggcgac
     6661 aaaagattcg gatattcctc acccgacaat gtggtcggca gatacatgtc ttgcagcctt
     6721 gggtcatacg ggaccgacac caagtgcagt gcacgatctt cgttcttaat ggctcttgca
     6781 agcggaaaga ccttgcccgt gctggtgatg tatccgtcaa cttcgccatc gataactttc
     6841 tggatcgcgc ggttatcatc ggttcgataa tcgaacgacg ccttgatgcc gaggcgcgag
     6901 aaaaccaccc tggcggtgta gagacctacg tcggtctgcg ccgtgatctt ctttccctcg
     6961 agatcaaata tggattttat ggggttgcgt gcaataatat gaagttcatt atgataaagc
     7021 ttcgtaatat atctgagtct cgtcgtgatg tccgagatct tgtactgcaa tttataaaac
     7081 tccggcacat ccgccgtcac cattcccatg tcgatgctct tgagatagag gatatcgacc
     7141 acgttgcgga ccggcccttt gcccagaata ggcagcacac gaatcgatgc tgcgtcatca
     7201 tcgagcaccc gcgccatgtc ggagccaaag attgccgtgg cacctccagc tggcgcggtg
     7261 atcaccgtca cggttccttc gttgatgcga ttacgatccg ggatcgtcca cgtctcatcc
     7321 gaaaggtcgg tgttcgcatt tgctgcaggc gcacgtgcta cgggcgcgcg cagtacggcc
     7381 tgcgacacgg caccgcccgt aagtacaaac agtccaatgc aggccacgac aacgtgtcga
     7441 atgcacattc cccaacccct tctggatatc gagctccgaa attccactta gacacaattt
     7501 attcgatcga attatgaaat ttaaacacac ttttaaattg tcaggttttc ggcgatgctc
     7561 ggtttcgtcc gcaattcagt tgaaaatttg cgcggttagc cttttgccag attgacggtg
     7621 tagaagtata tcctgctgac attcgtccag cgttagcgcc agggttgcgc cttaatcatg
     7681 ccgcaatcgc gtttgcccgc gccccatagg gcgcaactac accatcgcgc tacgcgtgtg
     7741 cttggcggcg tggatcgatg atctgctcga tcttgcccaa gacgtgcatg caaggcagca
     7801 cctcggcgag gctcgcattc ggctgacgct tttcccggat ggcggcaata aattcgcgat
     7861 cttccaattc gatgccgtcc atcgacacgt ccaccttgga gaggtcgatc tgattcttct
     7921 tgccgtcgaa gagatcgtcg taataggcgt tgtaggtgcc gttgtcgcag atgtagcgaa
     7981 agaacgagcc gatcgggccg tcattgttga aggacagcga caacgtcaga atcgcacccg
     8041 acgacacctt catgacgatg cccatgtcca tggcgatctt gagctgcggg tggggtggcc
     8101 cctgcaccgc aaagcactcc gagacggtct caccggtctg atattggaac aagtcgacgg
     8161 tatgggccgc atggtgccac agcagatggt ccgtccagct gcgcggtttg ccggcggcat
     8221 tcatattgga gcggcggaag aaataagtct gcacgtccat ctgctggatc ttgagttcgc
     8281 cgttccggat ccgcttgtgc acccattggt gactcggatt gaaacggcgc acgtgcccgc
     8341 ccatcgcaac gacaccggtc tcttgctgga ttttcacaag cgcttcggcg tccgctacgc
     8401 tatcggcgat cggaatttct atcagcacgt gcttaccggc gcgcatcacc tgctcgcctt
     8461 ggcggcgatg catctgggtg ggagtcgtga ggatgacagc gtcggcacgt ttgatgcctt
     8521 caccgagatc gcccgtccag tgcggcacac cgtatttctt cgcgacctcc gctgtcgcat
     8581 cctgattacc gccgatcagc gacaccacct cgacatccgc aatacgcttc aaggcatcga
     8641 gatgcttttg accgaaagcg ccctgtccgg ctacgcaaat cttcatcgct tgctcctgac
     8701 gacgacctgc ttggcttcaa gggcggcgcg cctcttcgga gcatggcgcc cggtcggtac
     8761 cggacgcttg cctttcgggc tgcccgaggc attctccagg atgatgtggc cgaccgcggt
     8821 gttggaggcc ggcaccgtgt agaagcggta gacttccttc actttgtcgt cgagggcgcc
     8881 gcgcatgatg agccacatca ccatctcgat gccctcggcg cccgcctcgc gcatatattc
     8941 gatgtgggga attcgggcga gcttcttcgg gtcccgggtt agcccgtcca gataggcctt
     9001 gtcgaacttg ctattgatca atcccgcgcg cggcccggaa atctggtgcg acatgccgcc
     9061 ggtgcccatg atcaccacgc gcaggtcttc cgggtaggac tgcaccgcct tgcggattgc
     9121 gcggcctagc atgtagcagc ggtggccggt aggcggcgga tacatcacca cattgacggc
     9181 gagcggaatc accgggcacg gccattcggt gggcgagccg aacatgagat tgagcggcac
     9241 cgtgaggccg tggtcgactt ccatcttgtt gacaatcgta agatcgaatt cgtcaaggat
     9301 gacggattgg gcgatgtggg acgccagcgc tggatgaccc ttgacgaccg gcaccggacg
     9361 ggggccccag ccttcatcgg cgggcgggaa ttccgccgca cagccgagcg caaaggtcgg
     9421 gatcagttca accgaaaacg cagaggcgtg atcgttatag accgcgatga ctaaatcggg
     9481 cttggttttc gccatccatt ccttggattt ttcgaacccc gagaacaccc gtttccaata
     9541 gggctcctcg gtctttttga gatcgatggc cgcgccgatg gctggcacgt gcgaggacgt
     9601 cacgcctgcg atgattctag ccacgttttg atcctacctt ttgccgcgct tcggagtcga
     9661 ccggagtttg gattttgcgg ccggtttggc cgatgcgttg cgggccctcg gcttcttgcg
     9721 gacatcgagc ccggatctgc tacggttgcc ctcgactgaa cggccgcccg ccaacatcat
     9781 cttggcatag tcatcctggg tcgagttagt catcaccgcc gccatgtgct ggaacgagtg
     9841 tccatcggta gcccccagct tggcagtgaa atagatgttg ccgccaagtt ccagcatccg
     9901 gttgtattcc cgcttgagga tggcctcgcg ctgctccggc gttagcgcga agcggttgag
     9961 atattcggcc tcgttcgcct tgaacgcctt gcggttctcc gccttcatga gggacatgca
    10021 gaacatgttg agatgatagc cttggcgtga ccgatcggcg tcaaacacga acgtgcccgg
    10081 aatgtcgtca tattccttag cttctttttc cttagcttct ttggccgccg tcatcggcat
    10141 ctctccatgg cattgcggac agggccgtca cttaatatcg ccttgggcga ctttgcaatg
    10201 cgtggggcgc tgcgttccgc gggcaatttg aagcaaggag ggaaatgctc tatcgtgtaa
    10261 atgtcccgac attcatgagg ccggcccatg agcacgaaac gtgccctgag cttagacacc
    10321 gttatccgaa gagcaagcga accgatttcg acgcctgatc ccgacactgc cgcgttgacc
    10381 gccctcgccg taacggtggc gctactgcga gcgctgcgcg atcggggcct gctgtcggag
    10441 ggcgaaatcg acgatctgtt cggcgaggcc gccgaacgtc tccgggacac ccctgcgttg
    10501 aacctcctaa tccgtgtgca ggacgacgtg gagcgcaaga gcgaggaata ggcggtagct
    10561 tggtagcacg agttaagcgg caagcgaaac ccatccctct acgcccaata caaccgcatc
    10621 ggattgtcga tcagcaacgc cttctgctcg gcggcgcttg gcgcgatctt tggaatgtag
    10681 tccaccaata cgccgtcgtc aggcgcctcc tttttcgcat tggggtgcgg ccaatcggtg
    10741 ccccacagca cccggtcggg gaagtgctcg accagcgtgc ggccgaacgg caccacatcg
    10801 tcatagggcg ggcctgcaag cgtcatgcgc tcggggcagg tcaccttgct ccagatgttc
    10861 cggtgcttgt ccagcatgcg gatgaaacgc tggttttccg gatcgtcgac gcccttcttc
    10921 actgtcgggg tacccatgtg gtcgaccacc acggtggtgg gcagtgcagt aaaaaatgcc
    10981 tcgaaatcgg gcagatccgg catctcgaaa tagaccacaa tgtgccaacc gagcggcgcc
    11041 acccgggccg cgatgcgctc cagcacgtcg cgcggggtga catcgaccag tcggcgcacg
    11101 aagttgaagc gcacgccacg cacgccggca cggtgcatgg ctttcagctc tgcgtccgtg
    11161 acctccccgc ctacgaaggc gacgcctttc gcccggttat cggaggcttc aagcgcatcg
    11221 atcatggcgc gattgtcttt gctgtggcaa ctcgcctgca caatcacgtt cttgtcgagg
    11281 ccaaggaaat cccgcaacgc gaacagcttt tccttggggg cgtcgcaggg cgtgtatttg
    11341 cgctcggggg catagggaaa cgtcgcttcc gggccgaaca cgtggcaatg cgcgtcgacc
//
LOCUS       DATILV010000801         8851 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4033075, whole genome shotgun sequence.
ACCESSION   DATILV010000801 DATILV010000000
VERSION     DATILV010000801.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8851
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4033075"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            61..924
                     /locus_tag="VLJ17_19525"
     CDS             61..924
                     /locus_tag="VLJ17_19525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25208.1"
                     /translation="MLDRSSTTAASLALAAVLMMAFTGAQAADDPMYPDWEGAWIRIP
                     VKLPTQPSHDQTKPWGRGQQAPLTPEYQAILEASIADQAAGGLGNFPTTLGRAAGMPH
                     MMMGFGPMEFVVTRKTTYILIGWYDHYRRIFTDGRTWPKEIEPTFAGYSIGKWIDTDG
                     DGRYDLLEIETRGFKGPRAYDEAGLPLHFDNQSLFKERIWRDKADPNILHDEITTYDH
                     GLTRPWTVDKKYVRNPDPLADWPEYYIAEGNGQIMIGKENYFLSGDGLLMPAKKDQAP
                     PDLRYFKSTQK"
     gene            1431..3791
                     /gene="bamA"
                     /locus_tag="VLJ17_19530"
     CDS             1431..3791
                     /gene="bamA"
                     /locus_tag="VLJ17_19530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008973846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HSV25209.1"
                     /translation="MRPRVWSRGGGAAPGMRPLCAMMLSVLAFCSAALSAPTIEVQGN
                     RRVDAQAIREHFHASADGLTAAAIDAALKELYETGLFEDVKIGRSGARLIVTVVEAAQ
                     IERLRFEGNKQIKDKDLAKEIRLKPRSAMTKVAVREDVARIVEMYHRNGRYQVEVTPT
                     TIARGEGRVDLVFDIREGPKTGIRRIAFVGNHEFAESRLKGVIKTTESGWFAFLKTSD
                     VYDPDRIENDADLLRRFYVKNGFADAHVAGVAQYDPPQQGFTVTFTINEGIRYRFGAI
                     EIQSRIAALDGAALRDVVHLAQGDIFDGEAVGKAADAIAVAAGKRGFPFVDVRPHANR
                     HSAADIISVVFTLDDGPRRYVERINIHGNTVTRDEVIRREFDVAEGDAYNRGLIDAAE
                     RRLKQLPPFKSVKIMAEDGSTPDRVVLNVEVEEQQTGDLWFSGGYSTSAGIIGEVSAS
                     ERNFLGLGQYVKVSVALGQYLRSGAVSFVEPYFLGNRMALGLDLFFKEVLANPYQSYG
                     SESYGASIKVSAPLMDGVTSEARYSLVNQSVSLDPTLMACIPPNASTTCPSVVVKQVA
                     LDGPQWVSTVGSTLIYSSLDNPKSPHEGLRAELSQNVATLPGTVDFLRTTGDVRYYHD
                     LGNDVVGLVRAQGGYITPYGGQTLPLMSSFFGGPQLVRGFAVNGFGPRDVTIGTTQDN
                     IGGSRYWTTSTELQAPIPGLPPEIALKAAVFADAGSLWGYRGATSFPSLSQSLTVADS
                     RRVRSSIGSSLIWDSPFGPLRLDYAYPTSKASTDVTQRLHFGVGAF"
     gene            4134..5138
                     /locus_tag="VLJ17_19535"
     CDS             4134..5138
                     /locus_tag="VLJ17_19535"
                     /inference="COORDINATES: protein motif:HMM:NF024946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HSV25210.1"
                     /translation="MTSKSMKSTAACLVAGSIVGWHAPAMAGSDNSSDTYAGDYSAGS
                     LPTGTFIALQYLGFAHSNAFINTAGNQLPNSHANIWEEFTRFAYFTQLGGHPFIIEAE
                     LPFATLTNVNLPGTNSLVQGGLADPVVHLTYYFISDAQTQRWLGFTNYLYMPFGNYDN
                     TKAINVATAHQFTDVPQIGYTEGLEKFSPGLKGFFVDLIANASIHTDGNGPINLGVVS
                     YDTLTQRPSYDVKAFLRYEPTTFSFVALGIEKSWGGEQVATNGRFAVPLPLPQPPNLS
                     LTKDDFLRGHLQFQFPLARDFAVAADVFHDFARVGGFRDDIGAEIRLTKFFFPQPPLK
                     "
     gene            5639..6568
                     /locus_tag="VLJ17_19540"
     CDS             5639..6568
                     /locus_tag="VLJ17_19540"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSV25211.1"
                     /translation="MAYSVSNRAHATNVPGGVRFSCDDLIRGPLSAEAVAALRAHPLL
                     PEAVCAAAGAFVVIARQPPVIINDLGRLVIGNLSLYLHYSRNPADPSSGLSAGRMKVL
                     CAEQKVCSKGRVLAVMALIRQAGYLVPATCQVDQRLRLLVPTDKLITACRQYWEAIFR
                     GMAMVIPGRSDAIAALQCEDVLAAFLRVFGGYFCAGMRMFKPGAGLTPFAQRNAGLAI
                     LFSLLVASEQNGRAGLPVTVRISIAELARRFGVSRPQVVRVLDKAVEASLVERSGPDG
                     QEIMVLPRLRSVTEDFYVTAFLLCDYYMQIALD"
     gene            complement(6577..7674)
                     /locus_tag="VLJ17_19545"
     CDS             complement(6577..7674)
                     /locus_tag="VLJ17_19545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25212.1"
                     /translation="MRSSSRLGKGASHDGGDMRRVMWTLAFAIALGGPAAAVPTRAPD
                     LSTTDAVLRWINGYRVKPDFAHVPVAVRTLSQLGALRDSETAAVYVGFVAGIVRSHPQ
                     KADELIEKMLPIKAEDHWFVVRAIAYSGMPNWREVLLRFANRMPTRQLMIEKYTSGKL
                     PTLESISFENSPTPLNKLKGYTAAVGEFFTGHKPPEPVRLEATPEVLDTLWGYYFATA
                     GYEPVERILRMLPWSKDRQDTDKLTIGSMAKFTLASNAAHDTELLAMLRREVPRQPAD
                     VRPILNEVIEAADTMELTQLRKAALAAIEDLKRKGPGYKRDLSTWGQVGQGVLAAGCV
                     AAAATGQIEFGLPCVVGGALGSAALNYWTKD"
     gene            7989..8330
                     /locus_tag="VLJ17_19550"
     CDS             7989..8330
                     /locus_tag="VLJ17_19550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25213.1"
                     /translation="MRVGAAIDGYVGGSDGAWLSNVALLKAAAQLSGVASQWRRLSVL
                     DPEHLPHGPHHQGLDTLLHDPARLEEVVREDCFPRGNADRFEVDARPCELRLHHLGIA
                     PLAGAVVGPSR"
     gene            complement(8469..>8851)
                     /locus_tag="VLJ17_19555"
     CDS             complement(8469..>8851)
                     /locus_tag="VLJ17_19555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25214.1"
                     /translation="YRGFESLRLRQVSENAKIILSRPYKISGSQRVLSCPSFSHFVLP
                     LGCTGRLLQHLFERRCWPSCPDAVPSRISQIFAEKFGKSDNPFFCASSLLLRFAELNK
                     NLHVDPRHQADERGPQESRSAAEG"
BASE COUNT         1753 a         2620 c         2632 g         1846 t
ORIGIN      
        1 tgatgcgcga aagtggcgtc gatcacgatc aatcaagctg gaattccaag ggaggtagtc
       61 atgttggatc gaagctcgac tacggcggca tcgctagcgc tggctgccgt actcatgatg
      121 gcgtttactg gcgctcaggc ggccgatgac ccgatgtacc ccgattggga gggcgcatgg
      181 atacggattc ccgttaagct tcccacccaa ccgtctcacg accagactaa gccctgggga
      241 cgaggacagc aggcgccgct gacacctgag tatcaggcaa ttttagaggc aagcatcgcg
      301 gatcaggccg ccggcggact gggcaatttc cccaccacct tgggccgcgc ggccggcatg
      361 ccgcacatga tgatgggatt tgggccgatg gaatttgtcg tcacaaggaa gacgacctac
      421 atcttgatcg gttggtacga ccattatcgt cgaatcttta ccgacggacg cacctggccc
      481 aaggaaatcg agccgacctt tgcgggctat tcgatcggca aatggatcga cacggacggc
      541 gatggccgct acgatctgct ggagatcgag acgcgcggct tcaaggggcc ccgcgcttac
      601 gacgaagctg gcttgccgct tcacttcgac aaccaatcgc tcttcaagga acgcatctgg
      661 cgcgacaagg ctgacccgaa tatccttcat gatgaaatca ccacgtatga ccacggcctg
      721 acgcgtccgt ggacagtcga caaaaaatac gtgcgcaacc cggatccgct ggcagactgg
      781 ccggagtatt acattgccga aggaaacggg cagatcatga tcggcaagga aaactatttc
      841 ctgagtgggg atgggctttt aatgccggcc aaaaaagatc aggcgccgcc cgatttgagg
      901 tattttaaat caactcagaa gtagcgagca cgtttgcagg aagattaaga gccgggcgat
      961 gcccgaacgg ccgagttgcc gtcgtcttcc gtcgccctgg ttatggaggc cgcggttatc
     1021 tgccggagcg ccaaagagca gattttttcg cacggaaata tggggaaaca ggctcgcctc
     1081 ttgaaagacc tagcccagcg cccgcttatg ggtgggaacg agcgcgccgc cgcgatcctg
     1141 ccagacgctc agatcgcccg ccagtcaacc tgcagcggcg ctgcatcgag gcgagcgcgc
     1201 ggcaccggac acgctggact ttgtcaattc tttggcgctg atttggcgct ctcacgccgg
     1261 gatgagagaa atcagaggtg cacgctaaga gagaacacga accgcctcct gggttgcatc
     1321 cgcaacggac atcgaccttt ccatttctag cctgatcgaa aaaatacact cgcgcgaaga
     1381 aatcacgctt cggccgcttt tcgcaaggca atatgcggtc ggaggaattc atgcggccga
     1441 gagtttggtc acgaggcggc ggcgcggcgc ctggaatgcg cccgctttgc gcgatgatgc
     1501 tatcggttct cgcgttttgc agtgccgccc tatccgcacc gacgattgag gttcagggca
     1561 atcgacgcgt cgacgcgcaa gctatccgcg aacacttcca tgcttcggcg gacggcctta
     1621 cggcggccgc gatcgatgcc gcgctgaagg aactttatga gaccggtctg ttcgaagacg
     1681 tgaaaattgg tcggtccggt gcgcgcctga ttgtcactgt cgttgaagcg gcgcaaatcg
     1741 agcgcctgcg gttcgaaggc aataagcaga tcaaggacaa ggatctcgcc aaggagatcc
     1801 gtctgaagcc gcgcagtgcg atgaccaaag tggccgtgcg tgaggatgtg gcccgaatcg
     1861 ttgagatgta tcaccgcaat ggccgttacc aggttgaggt gacgccaacg acgatcgccc
     1921 gcggtgaagg acgcgtcgat cttgtcttcg acatccggga aggccccaag accggcataa
     1981 ggcgaatcgc cttcgtcggc aatcatgaat ttgccgaatc gcgtctaaag ggcgtcatca
     2041 agaccaccga gtccggctgg ttcgcgtttc ttaaaaccag cgacgtctac gatcctgacc
     2101 ggatcgagaa cgatgccgat ctgttgcgtc gtttctacgt gaaaaacgga tttgcggacg
     2161 cgcatgttgc gggcgtcgcg caatacgacc cgccccagca gggcttcacg gtgactttca
     2221 ccatcaatga aggcatccgt taccggttcg gcgcaattga aatccagtcg cgtattgcgg
     2281 cgctcgatgg cgccgcgcta cgcgatgtcg tgcaccttgc tcaaggcgat atctttgacg
     2341 gcgaagccgt cggcaaggcg gccgatgcga tcgcagtggc ggccggcaag cgcggatttc
     2401 cgttcgtcga tgtacgcccc catgccaacc gccattccgc cgccgacatc atcagcgtcg
     2461 tcttcacgct tgatgacggc ccgcgccgct acgtcgagcg aatcaacatc cacggcaata
     2521 ccgtcacgcg cgacgaggtg atccggcgcg aattcgatgt cgccgaaggc gacgcctaca
     2581 atcgcggcct gatcgacgcc gcggagcggc gcttgaagca gctcccaccg ttcaaatcgg
     2641 tgaagatcat ggcagaggac ggctcgacgc cggatcgggt ggtgctcaac gtcgaggtcg
     2701 aggaacaaca gaccggcgat ctgtggtttt caggcggcta ctcgacgtct gccggcatca
     2761 tcggcgaggt cagcgcttcg gaacggaact tcctcggcct tggacaatac gtgaaagtat
     2821 ccgttgcgct tggtcaatac ctgcgcagcg gcgcggtgtc gttcgtcgaa ccctatttcc
     2881 ttggcaaccg gatggcgctc gggctcgacc tgttcttcaa ggaggttctt gccaatccgt
     2941 atcagtccta cggcagtgag agctacggcg cgagcatcaa agtgagcgcg ccactaatgg
     3001 acggggtgac gagcgaagcg cgctactcgc tggtcaatca gagcgtatcg cttgatccga
     3061 cgctgatggc ctgcatcccc cccaacgcct cgaccacatg cccatccgtt gtcgtcaagc
     3121 aggtggcgct cgatggcccc caatgggtgt cgaccgtcgg atcaacgctc atttattcat
     3181 cgctcgacaa tccgaagagc ccgcatgaag gcctgcgtgc ggagctcagc cagaacgtgg
     3241 ccaccctccc cggtaccgtc gatttcctca gaaccaccgg cgacgtgcgc tactatcacg
     3301 atctcggcaa tgacgtcgtc ggcttggtgc gggctcaagg cgggtacatt actccctatg
     3361 gcggacagac gctgccgctg atgagcagct tttttggcgg gccgcaactg gtccgcgggt
     3421 ttgccgtcaa cggatttggt ccgcgcgatg tcaccatcgg taccacccag gacaatatcg
     3481 gcggcagccg ttactggacg acctcaacgg agctgcaggc gcccatcccg gggctgccgc
     3541 cggagatcgc cctgaaggcg gcggttttcg ctgacgccgg aagcctgtgg ggctatcggg
     3601 gcgcaacatc gttcccgtca ttgtcgcagt cgctgaccgt tgcagactcc cggcgcgtcc
     3661 gttcgtccat cggctcaagt cttatctggg attcgccatt cgggccattg cgcctcgact
     3721 acgcctaccc gaccagcaag gcgagcaccg atgtgacgca acgcctgcat ttcggggtcg
     3781 gcgcattttg agttgccggc gggcttaccc ggccctcgcg taagggcggc ctctcgggtt
     3841 ggaattttgg tcttgtgacg ggcctgtgat atttctgcaa cacacaccaa aatactacac
     3901 tcggctgcca taggatcaat tttgtgcatc tgctcttgac cctgctgatt tgattagctc
     3961 tcgccggttg ggaagtctcg cgaggcgtga tggagaatca cacccgtgcg ccggccagat
     4021 tgcgacaagc cgctagaagc ttgacccgtt gcaaacgtct gattgctcgc cccttcctac
     4081 tctcccctgc aagcggcgga gaggaagggg cagtcatgga ggggggaacg caaatgacaa
     4141 gcaaatcaat gaaatcgacg gcggcctgcc tggtggctgg gagtatcgtc ggctggcacg
     4201 cgccagcgat ggcaggatct gacaatagca gcgataccta cgcgggcgat tactcggcag
     4261 gatcactgcc aaccggaaca tttatcgccc tgcaatactt aggttttgct cactctaacg
     4321 ccttcatcaa tacggcgggg aaccaattac cgaattcgca cgcaaatata tgggaggagt
     4381 ttacgcgatt tgcgtatttt actcagctcg gcgggcatcc cttcatcatc gaagcagagc
     4441 tgccgttcgc aacactcact aacgtaaatc ttccaggtac gaacagtctt gttcaaggag
     4501 gccttgctga ccccgtggtt cacttgacgt attactttat ctctgatgca caaacccagc
     4561 gctggctcgg ttttaccaac tatctctata tgccgttcgg caactatgac aacacgaagg
     4621 cgatcaatgt cgcgacggca catcaattca cggacgttcc ccagatcggc tataccgagg
     4681 gcctcgaaaa attctcgccg ggtttgaagg gcttcttcgt tgatctgatc gccaatgcct
     4741 caattcatac tgacggcaac ggtccgataa acctcggtgt cgtgtcttac gacacgctga
     4801 ctcaacgccc ctcgtatgac gtcaaggctt tcctacgcta cgaacccacg acgttttcat
     4861 tcgtcgccct cggcatagag aagtcgtggg gtggcgagca ggtcgccacg aacggcagat
     4921 ttgcggtgcc gttgcctctt ccacagccgc cgaatttgtc tctgaccaaa gatgatttcc
     4981 tgcggggcca cttgcaattt cagtttccgc tcgctcggga ttttgcggtc gctgcagatg
     5041 tctttcacga cttcgccaga gtaggcgggt tcagggacga cattggcgcc gaaattcgcc
     5101 tgacaaagtt tttctttcct cagccacctt taaaataagc agccggccat tctggtcggc
     5161 ggcttgcgcc aatcgctgta ggaaggaggg cgcgcgagcg tcatgctttc tcgcgaaggc
     5221 gcgaagcggc ggctgtggca tgtcgctgcg ggaaaccctg ggctgaagcc gtcaggcttg
     5281 agcgtccgtt tcgaagcttc ttgaatcacc tcaatcgttg cccttcggca cgtgagttgc
     5341 ctcgcaggcg aagaaagcaa caggattatc tggccgcctg cttaacctaa cgcctttggc
     5401 gcgccccttg tggtcacccc gcgcgtgccc tgaccacttt cgtaagacgc gccatgccca
     5461 cactttctcg ggcttctcat cgtcgaaagc cagcgcgctt agtcctcggc aatgtaccgg
     5521 cgcatgcgat tgcgtccgca ggcaacatgg gcgaccccac cgggtgcaac tcgacatttg
     5581 ttgaccgagc ccacgatcct tggttgccta tgcccgacgg cagaacgggg atcatggctt
     5641 ggcgtactca gttagtaatc gtgctcatgc gacgaacgtt ccgggcggcg tccgtttctc
     5701 ttgcgacgat ctgatcagag gccctctctc ggcggaagcc gttgccgcgc tgcgggcaca
     5761 tccgcttcta ccggaggcag tgtgcgccgc cgccggggcg ttcgtcgtga tcgcgcgcca
     5821 acctcctgtg atcatcaatg atctgggacg tttggtcatc ggtaaccttt cgctctatct
     5881 gcactactca cgaaatcccg ccgaccccag ttccgggctt tcggccggcc gcatgaaagt
     5941 gctctgcgct gagcagaagg tctgcagcaa ggggcgagtg ctcgccgtga tggccttgat
     6001 acgccaggcc ggctatctcg ttccggcaac gtgccaagtc gaccagcggc tgcgcctgct
     6061 cgttccgacc gacaaattga tcacagcctg caggcaatat tgggaagcca tttttcgcgg
     6121 catggcaatg gtgatccccg gacgatcgga tgcgatagcc gcgctccaat gcgaggacgt
     6181 gttagcggcc ttcttgcggg tgtttggcgg ctacttctgc gccggcatgc ggatgttcaa
     6241 gcccggggca ggactcacgc cgttcgccca gcgcaacgcc ggccttgcca tccttttcag
     6301 tctgttggtg gcttctgagc aaaacggcag ggcgggtttg ccggttaccg tgcggatatc
     6361 gattgcggaa ctggcgcggc gttttggcgt ctctcgcccg caagtggtgc gggtgttgga
     6421 caaggcggtt gaggcctcgc ttgtcgagcg atccgggccg gatggtcaag agattatggt
     6481 tctgccacgt ctgcgcagcg tgaccgagga cttttatgtc accgcattct tgctttgcga
     6541 ctactacatg cagatagcac tggattaggt cggcgattaa tccttcgtcc aataatttag
     6601 cgcagcagag ccgagcgccc cgcccacgac gcagggtaga ccgaactcga tctgtccggt
     6661 tgccgccgcg gcaacgcaac cggccgccag tacgccttga ccgacctggc cccaggtgga
     6721 gaggtcacgt ttgtagcccg gccctttgcg cttgagatcc tcgatggcgg cgagcgctgc
     6781 tttgcgcagc tgcgtcagtt ccatggtgtc tgccgcctcg atgacttcgt tcaagatggg
     6841 tcggacatcc gcgggctgcc gaggtacctc gcgcctgagc attgcgagca gttcggtgtc
     6901 gtgggcggca ttgctggcaa gggtgaattt ggccatgctg ccgatggtga gcttgtcggt
     6961 gtcctgccgg tccttcgacc acggtaacat gcgaaggatg cgctcgactg gttcataccc
     7021 tgccgtcgca aaatagtagc cccatagggt gtcgagcact tccggggtcg cttcgagcct
     7081 gacgggttcc ggtggcttgt ggccagtgaa gaattcgccg accgctgccg tatatccctt
     7141 gagcttgttg agcggcgttg gactgttctc gaacgagatc gactcaagcg tcggcagctt
     7201 cccgctcgtg tatttctcga tcatcagctg tcgcgtcggc atgcgattgg caaagcgcaa
     7261 gagcacctcc cgccaattcg gcattcccga atacgcaatg gcgcgtacaa cgaaccaatg
     7321 gtcttcggcc ttgatcggca gcatcttctc gataagttca tcggccttct gcggatgaga
     7381 tcggacaatg ccggcgacga agcccacata cacggcagca gtctcgctat cgcgtagtgc
     7441 gccgagctgg cttaaggtgc gcaccgcaac cggcacgtgg gcgaaatcag gcttgacccg
     7501 atagccgttg atccaacgca aaaccgcatc cgtggtgctg agatcgggtg cacgcgtcgg
     7561 cacagccgct gccggtccac cgagcgcgat ggcgaaagcg agagtccaca tcacgcgacg
     7621 catgtcgcct ccgtcgtgac tggccccctt gccgagccgg gaagacgacc gcatcggccc
     7681 ggcaacttcg tgattatttc gcgtcatccg ggtgcaattt tcatggcacc ggcctgatgc
     7741 cctcccacat tgccactgtg ggggcgatcc tcattggcgc taacttaccg tctcttgcct
     7801 cagaatccac tatgattctc gggctggacg cattgcgatt cactgtcaaa cgtcgcgtgg
     7861 ccgcgcaccg tcaatcggtt cgggcggcgc gaaattggtg gagcaagagg cgcgcgaatt
     7921 cgacgcgttc caacgagcgc gcaagatcaa atgcgcggtg gatcacttgc ggtgcaggct
     7981 tatcgctggt gcgcgtgggg gccgcgattg acggctacgt gggcggaagc gatggggctt
     8041 ggttgtcgaa cgtcgcgctt ctcaaagcag ctgcgcaact cagcggagtg gcgagccaat
     8101 ggcgcaggct ttcggtcctc gatcccgaac acttgccaca cgggccgcac caccaagggc
     8161 tcgataccct cctccatgat ccggcacgcc tcgaagaagt cgtccgagaa gactgctttc
     8221 cgcgcggcaa cgcggatcgc ttcgaggttg atgcgcgacc ttgcgaattg cggctgcacc
     8281 accttggtat cgccccactc gccggcgcgg tggtcggccc aagccgttag tagctcgcgg
     8341 cgtttctgat cgaacgtggc gcacccgcac ctttgacctt gtccgcctct ttgtgggcaa
     8401 gcgctgcttg cgcaacctca ggccggaagt tcgtgcactc gctcgaccag tccttgaacc
     8461 ttgatcggtt acccctcggc ggcagacctg ctttcttgcg gtccgcgttc atctgcttga
     8521 tggcgggggt cgacatgcaa atttttattc agttcggcaa aacgcaagag caagcttgaa
     8581 gcgcagaaga aggggttgtc gctcttgccg aacttctcgg caaagatttg cgatatccgc
     8641 gaagggactg catcagggca tgaaggccaa caccggcgct cgaacaggtg ttgcagaagg
     8701 cggccagtgc agccaagagg cagaacaaaa tgagaaaacg atgggcagga aagaacgcgt
     8761 tgtgaaccgg aaattttgta cggtcttgag agaattatct tagcgttttc agacacctgg
     8821 cggagacgga gggattcgaa ccctcgatac g
//
LOCUS       DATILV010000802         2659 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3772914, whole genome shotgun sequence.
ACCESSION   DATILV010000802 DATILV010000000
VERSION     DATILV010000802.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2659)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2659)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2659
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3772914"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            216..1193
                     /locus_tag="VLJ17_19560"
     CDS             216..1193
                     /locus_tag="VLJ17_19560"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV25215.1"
                     /translation="MELPRRQFLRFAAAAVVPMIPATLWAEPFPARPITIVVPIAAGG
                     AVDTAARIIAEKLQEKLRQSVVVENRPGAGSLIGTNFVAKAAPDGYTLLLMEPGAVLA
                     KWLNKAVPFDVTRDFSPIAMVATSPLVLFAHPSVGFNDVKELIAYGKANPGMLSVGTP
                     GIGTPHHLAAAWLNTAAKIQITHVPYRGAGPALNDLLGGQIPLVWASPVAVLPFFEQG
                     KVKALAVSTRRRDRMLPNVPTMAESGVPEFDTANWFGIAAPAKVRPEIIARVGQAAHE
                     VTEIRDVQMRMSTLGLSIDFRDSDQFRELIINDHQKYETIVREAGIHPG"
     gene            1234..1977
                     /locus_tag="VLJ17_19565"
     CDS             1234..1977
                     /locus_tag="VLJ17_19565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HSV25216.1"
                     /translation="MHRTTDDSDNVAAVGFANCIIPFWQVELGPELLGIYLMGSLAHG
                     GFSRRYSDIDIAVVSKAGLSTKALDRVRSKAIALSADLGSRLSVFWADRRFRLGRFPP
                     LDRVDYLDHAVALMERQRVRPTRPSLEEIRRYLADAPFANWRVSAQRFASAEVLEPQD
                     RKAFLRTLLYPARFCYSWMTGRVGSNDEAVAFVSEVCPSRLDMTLITRALQCRQAEAD
                     PDLLFPARISLSSQVDACFALLSGPPLAG"
     gene            2129..2359
                     /locus_tag="VLJ17_19570"
     CDS             2129..2359
                     /locus_tag="VLJ17_19570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25217.1"
                     /translation="MSNKTIATAATMGIDIGKNSFHVVGLDRRGDRLSRDGRTASVSG
                     PAGRPGWIPGHKLTHATQQTRDAPDIYPLQSE"
BASE COUNT          517 a          820 c          772 g          550 t
ORIGIN      
        1 cgctgccttc cccatgctgc cggtttgaat gacggacagc aggatatcca cgtcacgcag
       61 cctgaggcgg cggcggactc ggtcattcca atgggcggct gtcattcgcg accgttatgg
      121 taccattcga taatgatatt atctggttct gagcagcgca gctaggctcg tcattggttg
      181 gcttgcatga gtgacgccca gcaagggagg acgccatgga acttccgcgc cgccaattcc
      241 tgcgctttgc agctgctgcc gttgtcccga tgattcccgc taccctgtgg gcggaaccct
      301 ttcctgcgcg gcctattacc attgtggtcc cgattgcggc cggcggcgct gttgacacgg
      361 ccgcgcgcat catcgccgag aagctacagg agaagctgcg gcagtcggtt gtggtggaaa
      421 accgacccgg cgctggctcc ctcatcggca ccaatttcgt cgcaaaggca gcgcctgatg
      481 ggtacaccct gctgcttatg gagcccggag ccgttctggc gaagtggttg aacaaggcag
      541 tgcccttcga cgtaacacgt gatttctcgc ctattgcgat ggtcgctact tcccccctag
      601 tactgttcgc ccacccttcc gtcggcttta acgacgtcaa ggaactcatc gcatatggca
      661 aggccaatcc gggcatgctg tcggtcggaa cgccagggat cgggacgccg catcacctgg
      721 ctgccgcgtg gttgaacaca gcggcgaaga ttcaaattac acatgtaccc tatcgcggag
      781 cggggccggc cctgaatgac ctgttaggtg gacagattcc gctcgtctgg gcatcgccgg
      841 tcgcggtctt gccattcttt gagcaaggca aagtgaaagc gctcgcggtt tcgacgcgtc
      901 gacgcgaccg catgctccct aacgtgccca caatggctga aagcggcgtg ccggaatttg
      961 acaccgcaaa ctggttcggg atagcagcac ccgcaaaggt gcgaccggaa atcatcgcgc
     1021 gcgtcggaca agccgcccac gaggttaccg agattcgcga tgtccagatg cgcatgtcga
     1081 cactgggatt gagcatcgat ttccgcgaca gcgaccaatt tcgcgaactg atcatcaacg
     1141 accatcagaa gtatgaaacg atcgttcgcg aagccggaat tcacccggga tgaacccaga
     1201 agctccggtg ggcattgcga gatatttcct cccatgcaca gaacaacgga cgattccgac
     1261 aacgttgccg cagtcggttt tgccaattgc atcattccat tctggcaggt ggagctcggg
     1321 cctgaactgc tcggaatcta cctcatgggc agccttgccc acggcggatt cagccggcgc
     1381 tacagcgata ttgatatcgc cgtagtcagc aaggccgggc tatctacaaa ggcgcttgat
     1441 cgcgttcgca gcaaggcaat tgcgctatca gccgatttgg gatcgaggct ttccgtcttc
     1501 tgggccgacc ggcgatttcg cctcggccga tttcccccct tggatcgtgt cgattacctc
     1561 gatcatgcgg tcgcgctaat ggagcgccag agggtgcgac caacgcgccc ctcacttgaa
     1621 gagatcaggc gttacctcgc cgacgcgccg tttgcaaact ggagggtctc ggcgcaacgc
     1681 tttgcgagcg cagaagtttt ggagccgcaa gatcgcaagg catttctgcg gacgctcctc
     1741 tatccggcgc gattctgcta cagctggatg acgggccgcg tgggctcgaa cgatgaagcc
     1801 gtggcgttcg tcagcgaggt gtgtccttcg cggctcgaca tgacattgat cacccgcgcc
     1861 ctgcaatgcc gccaagccga agccgatccc gacctcctat ttccggcgcg catctcgctg
     1921 tcgtcccagg tcgatgcttg ttttgcactt ctctctggac cgcctttagc gggttgagac
     1981 cggactcgca gcgctgtctt tcaaaacgca tcaaagccgg agcatcgtac ttcactccta
     2041 gtgatgtccc ctgacggaat ggtccggccg tgctcctgcc tcaccagcga gtgatgctgg
     2101 gaggaactgg cgatcaaagg agcacgccat gtccaacaaa acaatcgcga ccgctgccac
     2161 gatgggcatc gatatcggca agaattcgtt ccacgtcgtc ggcctcgatc gacgcggcga
     2221 ccgcttgtcc cgtgatggcc gcacggcctc agtaagcggc cctgccggcc ggccggggtg
     2281 gattccgggc cacaagctga ctcatgcaac gcaacaaacg cgcgatgcgc cggacatcta
     2341 tccccttcaa tctgaatgac tcaggccact accgctaggc ttcgttgctt tcaaccatcg
     2401 ctggttcaaa tgccattcga ggtgaccaag gtggatacgc ctttggtcct tccgcggcat
     2461 ttgcgccggt gttcggcgcg cgtgatttca tggcgcacgt catcgggcag cggcggcacc
     2521 gagtattcgt tcttgtcaga tcacaccaag gtccctcagg atgtcgtcgc cggcccggat
     2581 ctcgtgactt gagccctcaa gatcgcggcc gacgggctca aaccggccgc caagatgccg
     2641 ggcaaaaaag gcctcagcg
//
LOCUS       DATILV010000803         6084 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2752303, whole genome shotgun sequence.
ACCESSION   DATILV010000803 DATILV010000000
VERSION     DATILV010000803.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6084
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2752303"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..631)
                     /locus_tag="VLJ17_19575"
     CDS             complement(<1..631)
                     /locus_tag="VLJ17_19575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014329120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HSV25218.1"
                     /translation="MGAQQSNPAGPNLAMGIPIDDLPDGNMIAGHVGEDAVLLARRGN
                     EFFAIGATCSHYGGPLAEGLMVDDTVRCPWHHACFSLRTGEALHAPALSPVACWAVEH
                     RDGKLFVTIKKETPAAENRRGAAAAAHMPERIVIIGGGAAGFAAAEKLRREQYQGSIV
                     MLSKDDTPPVDRPNLSKDYLAGNAPEDWIPLRPASFYADNDIETHLNTNV"
     gene            784..1440
                     /gene="folE"
                     /locus_tag="VLJ17_19580"
     CDS             784..1440
                     /gene="folE"
                     /locus_tag="VLJ17_19580"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016840697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003934 - GTP cyclohydrolase I activity
                     [Evidence IEA];
                     GO_process: GO:0042559 - pteridine-containing compound
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HSV25219.1"
                     /translation="MNTLEKIHNGTSTYAPAAKPPQKARRPSRAEAEQAVRTLIRWAG
                     DDPDREGLVETPARVARAYEQWFAGYSEEPEELLQRTFEEVAGYDEMVLLRGIRFESH
                     CEHHMAPIIGRAHIGYVPHSRVVGISKLARLVEVYAKRLQIQERITAEIANTLERVLQ
                     PLGVAVIIEGTHGCMTSRGVSQRDATMVTSRMLGVFRDQPETRHEFLSAIDLRGSMRS
                     "
     gene            1486..2178
                     /locus_tag="VLJ17_19585"
     CDS             1486..2178
                     /locus_tag="VLJ17_19585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014497308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HSV25220.1"
                     /translation="MQPSAHNVDLTALDDMELVKLARQRNGAAFRVIMQRCNRRLYRI
                     ARAVMHDDGEAEDVVQEAYVRAFASLADFRSDSSLSTWLSRIVLNEALGRLRRRRPTI
                     DVASIENRQEPQSSIIPFPLASTQPDPERTMAQRQIQVLLERAIDDLPDVFRTVLVAR
                     VVEGMSVEETADLFSLRPETVKTRLHRARRLLRDALEKHTGPLLTNAFPFDGWRCERT
                     TNKVLERLGLPL"
     gene            2333..3652
                     /locus_tag="VLJ17_19590"
     CDS             2333..3652
                     /locus_tag="VLJ17_19590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018234691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25221.1"
                     /translation="MKLRTVVIAGISGAAASGSIIAFAAAPSRHSVDVENLRHAQNQI
                     EEGKKIFRYETFGSEAFWGDALQLHKAIAGEKNGGVGPGVSPKTALSVGLKVDADALP
                     DSLKKQLAAGKVNLDDPATTIALLKLNAVVGVTALADPDGSVKGMGIQCALCHSTVDD
                     SFAPGIGRRLDGWPNRDLNVGAIVSLAPNLKPFTDLLGVDTDTVKKVLASWGPGRYDA
                     ELDKDGKAFRPDGKQAGTLLPPAFGLAGVNLSTWTGFGSVTYWNAYVAGTQMHGAATF
                     YDTRFNNKDQFPVSAKSGAGETRNTPDKTTAKLAALHFYQLSIPAPKAPAGSYDKVAF
                     ERGKTLFNGPAKCATCHVPPLYTEPGRNLHTPEEIGIDSFQADRSPTHMYRTAPLAGL
                     WTHQKGGFYHDGRFATLPDVVNHYDTQFKLNLSSGQKNDLVEYLKGI"
     gene            4155..5981
                     /gene="glmS"
                     /locus_tag="VLJ17_19595"
     CDS             4155..5981
                     /gene="glmS"
                     /locus_tag="VLJ17_19595"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HSV25222.1"
                     /translation="MCGIIAILGKEPVAIGMVDALKRLEYRGYDSAGVATLEDGRLTR
                     RRAEGKLKNLEKRLGDEPLRGVSGIGHTRWATHGRPNEINAHPHATERVAVVHNGIIE
                     NFVELRAELESRGAKFATETDTEVVAHLVTDEMNKGADPIAAVSAALPRLRGAFALAF
                     LFSDEDDLVIGARRGSPLVVGYGDGEMYLGSDAIALAPFTSTITYLEDGDCVVLRRGG
                     ATIKDAIGNTVPRPVIRSNASAFLLDKGNHRHFMAKEIHEQPEVVGHTLGHYVNFAKG
                     RIALPETLPFDFRQIERISIAACGTAYYAGLVGKYWFERFARLPVEIDVASEFRYREA
                     PFAAGNLALFVSQSGETADTLATLRYAREHKQHIVSIVNVATSTIARESEAVMPTLAG
                     PEIGVASTKAFTCQLTVLACLAIAAGRARGTLSAEDEEKLVSALIETPRHMAAALALE
                     PRIERLARDLAKCRDVLYLGRGTSFPLALEGALKLKEISYIHAEGYAAGELKHGPIAL
                     IDETMPVVVIAPYDGVFEKTVSNMQEVAARGGRIILITDPKGARAATINSLVTMTVPE
                     VPSILTPLVYAIPVQLIAYHTAVIMGTDVDQPRNLAKSVTVE"
BASE COUNT         1224 a         1887 c         1834 g         1139 t
ORIGIN      
        1 caacgttcgt attgagatga gtttcaatgt cattgtcggc atagaagctc gccgggcgca
       61 gcgggatcca atcctcgggc gcgttgccgg ccagatagtc ctttgacaaa ttcggccggt
      121 cgacgggcgg cgtatcgtcc ttgctcagca tgacgatgct tccctggtat tgctcgcgac
      181 gcaatttctc ggcagctgca aagccggccg cgccgccgcc gataatgaca attctctccg
      241 gcatatgagc ggcagccgcc gcaccgcgcc gattttcggc ggccggcgtc tcctttttga
      301 ttgtcacgaa gagcttgccg tcgcgatgct cgactgccca acatgcgact gggctcaaag
      361 ctggggcgtg caatgcttcc ccggtgcgca gactgaagca ggcgtggtgc caagggcatc
      421 gcacggtgtc gtcgaccatg agcccctctg ccagcgggcc cccataatga gaacaggtgg
      481 cgccgatcgc aaagaattca ttgccgcggc gcgcgagcaa gacggcgtct tcgccgacat
      541 gcccggcgat catgtttccg tcggggagat cgtcgatcgg gattcccata gccaggttgg
      601 gaccggctgg attcgactgc tgtgcgccca ttgagacctc cttctgctgc ccttagatgt
      661 agcattggca acaaagttcc cgaaatcggc ccgctatcag cctcaatccg acgggaactt
      721 tttcacgccg ccggcatcca atgaccggca tcgtctcgga ttatgagttt ggagaaagtc
      781 ggtatgaaca cgcttgagaa gatacataac ggaacttcca cctacgctcc agcggcaaaa
      841 ccgccgcaaa aggcaaggcg tccctcccgc gccgaggcgg aacaggccgt gcgcactctc
      901 attcggtggg ccggcgacga tcctgatcgc gaaggtctcg tcgaaacgcc ggcccgtgtc
      961 gcccgcgcct acgaacagtg gtttgccggc tacagcgagg aacccgaaga actgctgcaa
     1021 cggaccttcg aggaagtcgc cggatatgat gagatggtgc tgttgcgcgg catccgattt
     1081 gaatcccatt gcgagcacca tatggcgcca atcatcgggc gcgcgcatat cggctatgtt
     1141 ccgcacagcc gggtggtcgg gatctccaaa ctggcgcggc tggttgaggt ctatgccaaa
     1201 cggcttcaaa ttcaggaacg gatcaccgca gagatcgcca atactttgga gcgggtcctc
     1261 caaccgctag gcgtcgccgt catcatcgaa ggcacccacg gctgcatgac cagccggggc
     1321 gtatcccagc gcgacgccac aatggtaacg agccgtatgc tgggcgtgtt tcgcgatcaa
     1381 ccggaaacgc ggcacgaatt tctctctgcc atcgatctac gcggatcgat gcggtcctga
     1441 aagctgttgg caggggaggg gagggagtat tgagaggaga tcgcgatgca gccgtccgcc
     1501 cataatgtcg acctcactgc gcttgacgac atggaactcg tgaagctcgc ccgccagcga
     1561 aacggcgccg cctttcgagt catcatgcag cggtgcaatc ggcgcctcta ccggattgcc
     1621 cgcgccgtca tgcatgacga cggcgaggca gaggacgtcg ttcaggaggc ttacgtgcgc
     1681 gcgttcgcga gcctggcgga tttccgcagc gactcgagcc tttcgacttg gctttcgcgc
     1741 atcgtcttga atgaggcact ggggcgactg cggcgccgtc ggccgacaat tgacgtggcg
     1801 tcgattgaga accggcagga gccgcagagc agcattattc cgtttccgct cgcatcaaca
     1861 caaccggacc ccgaacgcac catggctcaa cgacagattc aagtcctcct ggaacgcgcg
     1921 atcgacgatc ttccggatgt ctttcgaacc gtgctggttg cacgcgtcgt cgaaggaatg
     1981 agcgtcgagg aaactgctga tctgttcagt ctgcgtcccg aaaccgttaa gacgcgattg
     2041 catcgtgcac gtcgcctgct gcgcgatgca ctggaaaaac acaccggtcc gcttctgaca
     2101 aacgcctttc cgttcgacgg ctggcgctgc gagcggacga cgaacaaggt attggaacga
     2161 ctaggtttgc ccctttgacg cctccgccga atcttttttg acgactggcg gaaccttttg
     2221 atcggaacct catccaatat acatcctcag gtcgaaacct ggccggagac gcgcctggcg
     2281 acactggggg aggaggtgcg cactgcgcga actccatgaa tgggaggttc cgatgaagct
     2341 tcgaaccgtg gttattgccg gaattagtgg cgccgccgca tccggatcga tcatcgcttt
     2401 cgccgccgct ccgtcacgcc acagtgtcga tgtggaaaat ctgcgccacg cgcagaacca
     2461 gatcgaagag ggcaaaaaga tcttccgcta cgaaacattc gggagcgaag ccttctgggg
     2521 cgatgcgctc cagttgcaca aagccatcgc gggcgagaag aacggcggcg tcggtcccgg
     2581 cgtttcgccg aaaaccgcgt tgtccgtcgg tcttaaggtt gacgcggacg cgctgccgga
     2641 cagtttgaag aaacaactcg cggcagggaa agttaatctc gacgatcctg cgaccaccat
     2701 cgcgcttctc aagttgaatg ccgtcgtggg cgtcacggcc ctcgccgacc cagacggcag
     2761 cgtcaagggg atgggcatac agtgcgcgct atgtcactcg accgtcgatg actcgttcgc
     2821 gcccggcatc ggccggcgac tggatggctg gcccaaccga gatctgaacg tcggcgccat
     2881 cgtgtctctg gcaccaaacc tcaaaccgtt caccgacctt cttggggtcg ataccgacac
     2941 cgtgaaaaag gttctcgcca gttgggggcc cggtcgctat gacgcggaat tagataagga
     3001 tggcaaggcg ttccggcccg atgggaagca ggccgggaca ctccttccgc ccgctttcgg
     3061 cctggctggc gtcaatctca gcacctggac gggattcgga tcggtcacct actggaatgc
     3121 atatgtggcc gggacccaga tgcacggcgc ggcgacgttt tatgataccc ggttcaacaa
     3181 caaggaccaa tttccggttt ccgccaagag cggcgccgga gaaacgcgaa atacgcccga
     3241 taaaaccact gctaaactgg ccgcgctaca tttttaccag ctttcgattc ctgccccgaa
     3301 ggcgccggct ggctcatacg acaaagttgc attcgaacgt ggcaagacac tcttcaacgg
     3361 gccggcgaag tgcgcgacct gccatgttcc gcctctctat acggagccgg ggcggaactt
     3421 gcatacgcct gaggaaatcg gcatcgactc gttccaggcc gatcgttcgc caacccacat
     3481 gtatcgcacc gcgcccctgg ccgggctgtg gacgcaccag aagggcggct tttaccacga
     3541 cggccgcttc gccacattgc ccgacgtcgt gaaccactac gatacgcaat tcaaattgaa
     3601 cctgagcagc ggtcaaaaga acgatctggt ggagtaccta aagggaatct gagtatagag
     3661 cagattcgag tgaattgacg cgccgcatcg ttccctccct ggagggcagg gcaatcgcaa
     3721 gtggcgcagc gcctctgctc cctctccggc ttacgaggag agggggccgg gtaaggaggc
     3781 ctgcccacaa gctcacacac gcccattagc tcagactcgc agaggccccc ctcaccggga
     3841 tcgcgcaatc ccgtttgccg gggaggtgaa cgcggctccg tgccatatgc gattgccctg
     3901 cccacaaagg ggaggaggcc ttaacgattc ccgcccttta tggaattggg gaaccaagcg
     3961 ctgtaagcaa ccgaagcact ttgtgaaagc tcacacgtcg acaatttgtg ttagagggtt
     4021 gttcgaatga tttgaacgtt atgtgcgggc ttgacccgca catccatccg cacgcaagac
     4081 gcgtatttcg cacgatggat ggccgaatca attcccggat cagggagcca tgacggcaat
     4141 cggaaggcag ggtcatgtgt ggcatcatag caattctggg caaagagccg gtcgcgatcg
     4201 gcatggtcga cgcgctcaag cgcctcgaat atcgcggcta tgattccgcc ggcgtcgcca
     4261 cgctggagga cggccggctg acccgccgcc gcgccgaagg caagctcaag aacctggaaa
     4321 aacggctcgg agacgagccc ctccggggcg tgagcggcat cggccacacg cgctgggcga
     4381 ctcacggtcg gccgaacgag atcaatgccc atccccatgc caccgagcgc gttgcggtcg
     4441 tgcacaacgg catcatcgaa aatttcgtag agctgcgcgc agagctcgaa agccgcggcg
     4501 ccaagttcgc taccgagacc gacaccgagg tcgtggccca tctcgtcacc gacgagatga
     4561 acaagggcgc ggacccaatt gccgcggtca gcgctgctct gccgcgcctg cggggcgcat
     4621 ttgcgctcgc ctttctgttc tccgacgagg acgatcttgt gatcggcgcc cggcgcggtt
     4681 cgccgctcgt ggtcggctat ggcgacggcg agatgtatct cggctccgac gcaatcgcac
     4741 tcgcgccgtt taccagcaca atcacctatc tggaggacgg cgattgcgtc gtcctcaggc
     4801 gcggcggtgc cacgatcaag gatgcgatcg gcaatacagt accgcggccg gtgatccgct
     4861 caaacgcctc ggcgttcctg ctcgataagg gcaaccatcg ccacttcatg gcgaaggaaa
     4921 ttcatgagca gcccgaagtg gtcggccata cgctcgggca ctacgtcaac ttcgccaagg
     4981 ggcggatcgc actgcccgaa acgctgccgt tcgatttccg ccagatcgaa cgcatctcca
     5041 tcgcagcctg cggcaccgcc tattacgctg ggctggtcgg caagtactgg ttcgagcgct
     5101 tcgctcgcct gccggtcgag atcgacgtgg cgtcggagtt tcgctaccgt gaagcaccgt
     5161 ttgctgccgg caatctcgcg ctgtttgtgt cgcaatctgg cgagaccgct gacacgcttg
     5221 ccaccttacg ttacgcccgc gagcacaagc agcacatcgt gtccatcgtc aatgtggcga
     5281 cttcgacgat tgcgcgagaa agcgaggcgg tgatgccgac gctggccggg ccggaaatcg
     5341 gggtagcctc caccaaggcg ttcacctgcc agctcacggt gctggcttgc ctcgccattg
     5401 cggccggccg cgctcgcggc acgctcagcg ccgaagatga agaaaagctc gtcagcgcgc
     5461 tcatcgagac gcctcgccac atggcggcgg cgctcgccct tgagccgcgg atcgagcgcc
     5521 tggctcgcga tctcgcgaaa tgccgcgacg tgctttatct cggtcgcggc accagttttc
     5581 cgctggcgct cgaaggcgcg ctcaagctca aggaaatctc ctatatccat gccgagggct
     5641 atgcggccgg cgagctcaag cacggcccga tcgcgttgat cgacgaaacg atgccggtgg
     5701 tggtgatcgc gccgtatgac ggcgtgttcg agaaaacagt atcgaacatg caggaggtgg
     5761 cggcgcgggg cggccggatc atcctgatca ctgatccgaa gggtgcgcgc gcagcgacca
     5821 tcaactccct ggtcaccatg acggtgccgg aagtgccctc catcttgacg cctctcgtct
     5881 atgccatccc ggtgcaactg atcgcctacc acactgctgt catcatgggc accgacgtcg
     5941 accagccgcg caatctcgcg aagtccgtga cggtggagta gggggccttc ccgtctctcg
     6001 ctcttgcacg ggcaaacgtc attggcccga tcgacatcag gtcgacagca ccgagattgg
     6061 ccgtgccgtt gacaattccc tgcc
//
LOCUS       DATILV010000804         3622 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_702452, whole genome shotgun sequence.
ACCESSION   DATILV010000804 DATILV010000000
VERSION     DATILV010000804.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3622)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3622)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3622
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_702452"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..327)
                     /gene="cpaB"
                     /locus_tag="VLJ17_19600"
     CDS             complement(<1..327)
                     /gene="cpaB"
                     /locus_tag="VLJ17_19600"
                     /inference="COORDINATES: protein motif:HMM:TIGR03177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly protein CpaB"
                     /protein_id="HSV25223.1"
                     /translation="MKAARVVVLTVAVAAGGVAALLAGRSEKPPAPIKVEAPKADTVD
                     ILVAKSDLGRGQTISPADVSWEAWPANTAAGNFIRKSDRPKALENLAGMIVRTPFVAG
                     EPIREAK"
     gene            complement(502..999)
                     /locus_tag="VLJ17_19605"
     CDS             complement(502..999)
                     /locus_tag="VLJ17_19605"
                     /EC_number="3.4.23.43"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HSV25224.1"
                     /translation="MVTDVIRLLLFPALMAFAASSDLLTMTISNRLSLALAGGFFLLT
                     LMTGMSLPTIGLHLAAAAVVLAITFACFWQGWIGGGDAKLAAATVLWLGFDHVLDYLI
                     YASLFGGALTLLILFFRKLHLPQVLARHKWIARLHESGGGVPYGVALAAAALVVYPST
                     SWMPA"
     gene            complement(1012..1146)
                     /locus_tag="VLJ17_19610"
                     /pseudo
     CDS             complement(1012..1146)
                     /locus_tag="VLJ17_19610"
                     /inference="COORDINATES: protein motif:HMM:NF016828.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Flp family type IVb pilin"
     gene            1585..2064
                     /locus_tag="VLJ17_19615"
     CDS             1585..2064
                     /locus_tag="VLJ17_19615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016842645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein N-terminal
                     domain-containing protein"
                     /protein_id="HSV25225.1"
                     /translation="MSALLRRPRRLFGLWALALLAAGVIWAIPARADTVSINVDQAHI
                     LRLPERVATIVIGNPLIADATLQSGGVLVVTGKGYGATNVLALDRAGRIVLNQTVQVL
                     APAGDDLVTVYKGVERETYSCAPECERRITLGDSPTYFNATLTQSTTRNGQAQAAPR"
     gene            2206..2796
                     /locus_tag="VLJ17_19620"
     CDS             2206..2796
                     /locus_tag="VLJ17_19620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TadE/TadG family type IV pilus assembly protein"
                     /protein_id="HSV25226.1"
                     /translation="MFKVPRSKIAAYVHRLTLRFMRKKDGSAAVEFSIVAMPFLALLF
                     AIMETSLVFFADQTLESAVADSARLIMTGSAQTSGWSADQFKQQVCAKMNGGLFDCAN
                     KLMIDVKSYANFNAITNDPPPVTNGQLDASKLTYDTGSPGTIEVVKFYYAWPIYVSLL
                     GNNLSNLSGHNRMMIATAVFCNEPYSTQTPSTSCHP"
     gene            2784..3365
                     /locus_tag="VLJ17_19625"
     CDS             2784..3365
                     /locus_tag="VLJ17_19625"
                     /inference="COORDINATES: protein motif:HMM:NF019428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TadE/TadG family type IV pilus assembly protein"
                     /protein_id="HSV25227.1"
                     /translation="MSPMMTFRTPRILRCFGRDRRGTSAIEFAILAPLMLALYVGVVE
                     ISEGVAADRKVTLASGALANLTAQSQTISVAGMQNILNASTAVMSPFTGAVSAKVSCL
                     KIDAGGVVTVAWGAATTNTTPRAHGSTVSIPPDLRVPNSQLVFSEVSYQYVPVTGYIP
                     AWSHIGANGITLSDKMYMTPRLTPPVYNSTVCT"
     gene            complement(3378..>3622)
                     /locus_tag="VLJ17_19630"
     CDS             complement(3378..>3622)
                     /locus_tag="VLJ17_19630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HSV25228.1"
                     /translation="HSQEWLTRFADLIGVMPEVMEFYRMAGDVDYMLRVVVSDIAGYD
                     TFYKRLIATVPLKNVTSRFAMERIKSTTALPITEAR"
BASE COUNT          794 a         1044 c         1007 g          777 t
ORIGIN      
        1 ctttgcttcg cgtattggct cgcctgccac aaatggcgtg cggacgatca tgccggcgag
       61 attttcgagc gccttcggac gatccgattt acgaatgaaa ttgccggctg cggtatttgc
      121 cggccaggct tcccaagaaa cgtccgcggg agagatggtc tggcctcggc caagatcaga
      181 tttggctacc aggatgtcga cggtgtcggc cttgggcgcc tccactttga tgggggcggg
      241 cggcttttca gagcggccag ccagcaaagc ggcaacgcca cctgcggcta cggcgaccgt
      301 tagcactaca acccgtgcgg ctttcatacg ctcactctca ccgtgacatg cagccgaatc
      361 ggccgcttga aaccatatgg ccgtcggacg cggccacttt cactggattt caccagctaa
      421 aggtcaaggt atggttaagg agcggtatct aaatcgagtt aatattgtct tgcgacgcta
      481 atgcttcgga cttctgcgac tctaggcagg catccagctg gtgctgggat agaccacgag
      541 cgccgccgct gccaacgcaa cgccataagg cacgccacca ccggattcgt ggagacgggc
      601 aatccacttg tgacgggcaa ggacttgcgg caggtgcagc ttgcggaaaa acaatatcag
      661 cagcgtcaag gcgccgccaa acaacgatgc atagatcaga tagtcgagta catgatcaaa
      721 accgagccat aggacggtcg cagctgcgag cttggcatcg ccgccgccaa tccaaccttg
      781 ccaaaagcag gcaaatgtaa tcgccagcac cacggcggcc gcggcgaggt gcaggccgat
      841 ggtggggagg ctcataccag tcatcagcgt caacaggaaa aacccgccgg cgagcgcaag
      901 cgatagccgg tttgagatgg tcatggtcaa gagatcgctt gaggccgcga aagccataag
      961 ggcggggaaa agcagcagcc tgatgacgtc cgttaccatg atggtgctga ccttggtgtc
     1021 caggttgctg ccgatgccgt ttacgacggc aatgatcgcg accgaaatgg cggcggcgat
     1081 gaggccgtat tccatggccg tggcggccga ctcgtcttgc gcaagacgtt tgacgagctt
     1141 cttcatcagg acatccccac gtggcaacct gagcggatcc ggcgcctgat aagtgctccc
     1201 gagcgcgcgt gatcagaaaa aacgtagtgg tgaggtcttg cgcgagggtt aaaaaccacg
     1261 cgcggcgcta tgtatataaa cgacatagtg atcgtagtta acgaattata acctgatgat
     1321 ttgcatggct aataaattta atcttcaatt tatactatgc gatttcttgt aaatacacgc
     1381 tgaggcaaat aattgctgcg actatacttc cggcggatat ttgccgtgca gatggtgcag
     1441 tctgttccgg cactaattta agcgtgtttc cggcctgaaa gcccacgtct ttgcacttca
     1501 ttcaccaatt tgcagtcaac ttgagtaaac agaacgcgcc agcgcccgtg cggcgccttg
     1561 ttgtgcgtag ggttggagag cgcgatgtcg gccttgttga ggcggcccag gcggttgttc
     1621 ggcttatggg ccctggcttt gctggctgcg ggcgtcatct gggcaatacc cgcgcgggca
     1681 gacaccgttt caatcaatgt cgaccaggca cacatcctgc gactcccgga gcgcgtcgcc
     1741 acgatcgtca tcggcaatcc actgatcgct gatgccacgc tgcaaagcgg aggtgttttg
     1801 gtggtgaccg gcaaggggta cggagcgacc aatgtattgg cgctcgatcg cgcaggccgc
     1861 atcgttctga accagaccgt ccaggtgctc gcgcctgccg gtgacgattt ggtaactgtc
     1921 tataaggggg ttgagcgcga aacctacagc tgtgctccgg agtgtgagcg ccgcattacg
     1981 ctcggcgact cgcccaccta cttcaacgcc actctgaccc aaagcactac ccgcaacgga
     2041 caggcccaag cggcgccgcg ttaagcgagt atccaggtca aatacggtta gcgatcgctt
     2101 aacgcggtca aggtggttcc ttaggatttt ggcaagaatt aaaaaacgcg cccttgctat
     2161 caaattcggt gtttcggcac cgttcagcaa tcgaggcgcc ttttcatgtt caaagttccg
     2221 cgaagtaaga ttgcggctta tgttcatcgc ctgacgctgc gctttatgcg caagaaggat
     2281 ggcagcgctg ctgtcgagtt ttccattgtc gccatgccgt ttctggcgct gctcttcgcc
     2341 atcatggaga catcgctcgt cttcttcgca gatcaaacgc tggaaagcgc cgtagccgat
     2401 tcggcgcgat tgatcatgac cggctcggca caaacttccg gatggagcgc ggaccagttc
     2461 aagcaacagg tctgcgcgaa aatgaatggc ggtctttttg actgcgcaaa caagctaatg
     2521 atcgacgtca aaagctatgc gaacttcaat gcgatcacca acgatccgcc gccagttacc
     2581 aacggccaac tcgacgccag caagctgacc tacgacactg gctctcccgg caccatcgaa
     2641 gtcgtcaagt tctattatgc atggccgatc tatgtttcgc ttctcggcaa caatctgtcc
     2701 aatctaagcg gccacaatcg catgatgatt gcgacagcgg tgttctgtaa cgagccgtac
     2761 tcaacccaaa ccccttcaac ctcatgtcac ccatgatgac gttccgcacg ccccgaattc
     2821 tgcgctgttt tggtcgcgat cggcgcggca cttccgcaat cgaattcgcc attctggcgc
     2881 cgctgatgct cgcgctctat gtcggcgttg tcgaaatttc cgaaggcgta gcggctgacc
     2941 gcaaggtcac tctcgcgtcg ggagcgcttg ccaaccttac ggcgcagtcc cagacgattt
     3001 ccgtcgcggg catgcaaaat attctaaacg cgtcaaccgc ggtcatgtcg cccttcactg
     3061 gcgcggtctc agccaaggta tcctgcttga aaattgacgc gggtggtgtg gtgacggtgg
     3121 catggggtgc ggcaacgacc aacaccactc cccgagcgca tggcagcacg gtctcaatcc
     3181 ctccagacct gagagttccg aactcccaac tcgtgttcag cgaggtgagc tatcaatacg
     3241 tgccggtcac cggctacatc cccgcctgga gtcatatcgg ggcaaacggc atcaccctgt
     3301 ccgacaagat gtatatgacc ccgcgtctta cgccgccggt ctacaacagc acggtctgca
     3361 cctgaactta ttatcgctta tcgggcttcc gtaattggca gcgccgtcgt cgatttgatt
     3421 ctctccattg cgaaccgcga agtgacgttc ttcagcggca cggtcgcaat cagtctcttg
     3481 tagaacgtgt cgtagcccgc gatatcgctc acgaccacac gcagcatgta atccacatcg
     3541 ccggccatcc ggtagaactc catgacttcc ggcatcacgc cgatcaaatc agcgaagcgt
     3601 gtgagccatt cttgcgaatg gt
//
LOCUS       DATILV010000805         4608 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1729729, whole genome shotgun sequence.
ACCESSION   DATILV010000805 DATILV010000000
VERSION     DATILV010000805.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4608
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1729729"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(378..833)
                     /locus_tag="VLJ17_19635"
     CDS             complement(378..833)
                     /locus_tag="VLJ17_19635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HSV25229.1"
                     /translation="MDIKDFLLPTDALVKASASDKRRLLEELAARAASALNLAANRIS
                     VELLKREDLGSTGTGGGVAIPHARIPDLKKPFGTLVRLKNAIDFDAIDGKPVDIVFLL
                     LLPAQSQGDPLNALASVARRLRDPESVQRLRRAVDAAELYSAMLMGAQK"
     gene            complement(916..1605)
                     /locus_tag="VLJ17_19640"
     CDS             complement(916..1605)
                     /locus_tag="VLJ17_19640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008133403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV25230.1"
                     /translation="MSAAPAKVLVVDDERPIRKLLRMGLTTQGYEILEAPDGKTSLEL
                     LAQKPDLVILDLGLPDIQGLDLLKMIRARNESVPIVVLSSRGDEAGKVEALDLGADDY
                     VTKPFGMDELLARMRAALRHQLHVQGQRPIFRIGDLSVDLVRRIVKIRDTEVKLSPKE
                     YELLRVLVQHAGKVLTNRFLLGELWNDLTDAQYLRVYVRQLRQKIETNPERPHYILTE
                     TGIGYRLRAPD"
     gene            complement(1602..4325)
                     /locus_tag="VLJ17_19645"
     CDS             complement(1602..4325)
                     /locus_tag="VLJ17_19645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase KdpD"
                     /protein_id="HSV25231.1"
                     /translation="MADQRRNPEQRPSPEALLEAARREEGRVGKLRIFVGAAPGVGKT
                     YEMLQSARARTKDGYDVIVGVVETHGRRETEALLEGLEVIARQHVEYRGQLLEEMDLD
                     AIIARRPQIVLVDELAHTNAPGSRHPKRYLDVEELLSHGIDVYSTVNIQHIESLNDIV
                     AQITHVRVRETVPDSVFDRADAVELVDLTPDDLIQRLKEGKVYVPRQAERALEHFFTP
                     ANLTALRELALRRTAERVDEQLLTQMQAGAIPGPWAAGERILVCISEDPRCAGLVRYA
                     KRLADRLHGPWTALYIESRRSLQYSEEERDRIADTLRLTESLGGEAITIPSADRRIAD
                     DVIGYAQSHNVTHIIIGKSSRSRWFEIVHGSVVHDLVRRAGNISVHVIAGDAAASEPV
                     PKKTVHTVEGAETLDLRPYLVALLAVAVGLGVAEAIQPWLGIENVDLIFLTAVVGVAV
                     RYGLWPSLAASVAASLCYNFFFLPPIFTFTIADPTNVVAFFFFIVMAVIVSNVAARVR
                     TQAVVATMRARATESLYAFSRKLAGAGTVDDVLWATAYQTALMLKVRVVLLLPENGSI
                     VLKAGYPPEDTLDTADLAAAKWAWESDRAAGRGSETLPGAKRLFLPMHTGRGAVGIVG
                     IDSDKPGPLLTPDQRRLLDALMDQAALAIDRVRLVDDLERAKRTAETDRLRSALLTSI
                     SHDLKTPLAAVLGAAGTLRGLSDALDQHAKTDLLATIIDEAERLNRFIANLLDMTKLE
                     SGAIVPNSALHDLGEIVGSALERTSKILAQHRVEVDLAKDLPMVEIDPVLFEQVLFNL
                     LDNAAKYAPARTTVRVQSWRDWESVGLQVLDEGEGIPPGDLEQIFDKFYRARKVDQVR
                     AGTGLGLAISRGFIEAMHGTISAANRTDRMGAVFTIRLPVPTQVRRLDTAA"
     gene            complement(4366..>4608)
                     /locus_tag="VLJ17_19650"
     CDS             complement(4366..>4608)
                     /locus_tag="VLJ17_19650"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit C"
                     /protein_id="HSV25232.1"
                     /translation="PSAAVPIDLVTTSGSGLDPHISPQAALFQVPRVAKARNLPEDRV
                     RELLQEHTEGRFLGLLGEPRVNVLALNLALDRTVAR"
BASE COUNT          947 a         1379 c         1362 g          920 t
ORIGIN      
        1 caattcgtat tcgaatggta agcatgatta ctgctccaga gtcatcgccg gcgcgccgag
       61 agccgtgccg attgatattt gcaacacaac tgcattggcc ggcaagtaat cccggcctta
      121 tgcgccgtcg tcatttctcg cggcccatcg gtcggggatt tccgtctatg cgtaacgttg
      181 gtgaatcatg tgatgaccag cgcgccggcc ggaatggacg agcgacgctt ctgtcttcgc
      241 gatcggcgaa catctaacgg ctgttcagta aagaacggcc tgctctgagc aacagaccgg
      301 gggaatcacg ctcaatttgt gctgagatcc aggaacatga gacgccggct caaccccgtc
      361 aagggttgcg cctgtggtta cttctgggct cccatcagca ttgcgctgta cagctccgcg
      421 gcatcgacgg cgcggcggag tcgctgaacc gattccgggt ccctcaatct ccgtgcaacg
      481 cttgcgagcg cattgagagg atcgccttgg gactgcgccg gaaggagaag caagaagaca
      541 atatcgaccg gcttgccatc aattgcgtca aagtcgatgg cattcttgag acgaaccaat
      601 gtgccgaatg gctttttcag atcgggtatc cgcgcatggg ggatcgctac gccgcctccc
      661 gtcccggtgg accccaggtc ctcgcgcttt agcagctcaa cagagatccg gttggcagcc
      721 aaattgaggg ccgaagccgc gcgggcggcc aattcctcta gtaagcgcct tttgtcggac
      781 gcgctcgctt tgaccaaagc atcggttggc aaaagaaaat ctttgatgtc catggcggaa
      841 tgcctaagtc cgatgtccat cgcgacgacg ggggacgcaa gagttcttgt gtcttggatg
      901 gatcagtgtc atcgcttagt ctggtgcacg cagacgatat ccgattccgg tttcggtgag
      961 gatatagtgt ggacgttcgg gattcgtctc gatcttctgc ctgagctgcc gaacgtatac
     1021 acgaagatat tgcgcgtccg tgaggtcatt ccacagttcc cccagcagga atcggttcgt
     1081 tagcaccttg ccggcatgct gaacaagcac gcgcaagagt tcgtactcct taggagacag
     1141 cttcacctcc gtgtcgcgta tcttgacgat gcgccgtacc agatcgaccg acaaatcgcc
     1201 aatgcgaaaa attggacgct gtccttgaac gtggagttga tgacgaagtg cggcgcgcat
     1261 ccgggcaagc agttcatcca tgccgaaggg cttcgtcaca tagtcatcag ctccgagatc
     1321 gagcgcctcg actttgccgg cctcatcgcc acggctcgac agaaccacga ttggtacgct
     1381 ctcgttgcgc gcgcggatca tcttcaacag atcgaggccc tggatgtccg gcaatccgag
     1441 atcaagaatg accaaatccg gcttctgcgc caacagctcc aaagaggtct tgccatcggg
     1501 agcctctaaa atttcgtagc cctgcgtggt caagcccatg cgaagaagct tgcggattgg
     1561 gcgctcgtca tcaaccacaa gcaccttagc cggagcagca ctcatgcggc tgtgtccagt
     1621 cgccgaacct gcgtaggaac cgggagcctg atggtgaaca ccgcccccat gcggtcggtg
     1681 cggttcgctg ccgatatggt tccatgcata gcctcaatga agccacgcga tatggcgagg
     1741 ccaagtcccg tgccagcccg cacttggtcg actttgcggg cgcgataaaa cttgtcgaag
     1801 atttgctcca ggtcgccggg tgggatgcct tcaccctcat caagcacctg caagccgacc
     1861 gactcccaat cccgccagct ctggacgcga acggtagttc tggccggagc gtacttggca
     1921 gcgttatcta gcaggttgaa caggacctgc tcgaatagaa cgggatcgat ctccaccatc
     1981 ggcaggtcct tggcgaggtc tacctcgacc cgatgttgag cgaggatttt gctcgtccgc
     2041 tcaagggcgc tgccaacaat ctccccgagg tcatgcagag cagaattcgg cacgatggcc
     2101 cccgattcca acttcgtcat gtcaagcaag tttgcgatga agcgattgag ccgttcagct
     2161 tcatcgatga tagtagcgag aaggtcggtt ttcgcatgtt gatccaatgc gtccgaaaga
     2221 ccccgaagcg ttcccgctgc cccaagaacc gcggcgagcg gcgtcttgag gtcatgagag
     2281 attgaggtca gcagcgctga ccgcaaacga tccgtctcag ccgttcgttt tgcccgctcc
     2341 aagtcgtcga caaggcgcac gcggtcaatg gcgagtgccg cctgatccat caatgcgtcc
     2401 agcagtcgtc gctgatctgg ggtcagaagg ggcccgggct tatcgctgtc gattccgacg
     2461 attccgactg cgccccggcc ggtgtgcatt ggcaggaaca gacgcttggc acccggaagc
     2521 gtttccgaac cacgtcccgc ggctcggtca ctctcccaag cccacttcgc ggcagccaga
     2581 tcagccgtat ccaacgtatc ttccgggggg tagcccgcct ttaggacgat cgacccattc
     2641 tccggaagca acaatacgac gcgaactttc agcatcaacg cggtttgata ggccgtagcc
     2701 caaagcacgt cgtcaacggt gcctgcccct gcgagctttc ggctgaaggc atagagcgat
     2761 tcggtggcgc gcgctcgcat cgtcgccacg acggcctgtg tacgcacgcg cgcagccaca
     2821 ttggagacga tgaccgccat gacaatgaag aaaaagaatg ccaccacgtt ggtcgggtcg
     2881 gcgatcgtaa acgtaaagat cggaggcaag aagaagaaat tgtagcaaag cgacgctgcg
     2941 acgctggcgg ccagagacgg ccacaagcca tagcgcaccg caacaccgac cacagctgta
     3001 aggaatatga ggtcgacatt ctcaatgcca agccaaggtt gaatcgcctc ggcgacgccg
     3061 aggcctacag caaccgcgag gagcgcgacc aaataagggc gcagatcgag cgtttcggcc
     3121 ccttcgacgg tgtgcaccgt cttctttgga acgggctcgc tggcagccgc atcgcctgca
     3181 atgacatgta cgctgatgtt gccggcccgc cgcacgaggt catgcaccac agagccgtgc
     3241 acgatctcaa accaccgcga acggctcgat ttgccaatga tgatgtgggt gacgttgtgg
     3301 gactgggcgt agccgatcac gtcgtcggcg atgcgccggt cggcactggg gatcgtaatc
     3361 gcctctcctc cgagagactc tgtcagacgt agcgtgtccg caatgcgatc gcgctcctcc
     3421 tcagaatatt gcaggctgcg tcggctctcg atgtagagcg cggtccacgg gccatgcaga
     3481 cggtctgcca gtctctttgc gtagcgcacg agaccggcgc accggggatc ctcgctgatg
     3541 caaacaagaa tgcgctcgcc agcggcccag gggcccggaa tggctccggc ctgcatttgc
     3601 gtgagcaatt gctcatcgac ccgctccgct gtgcggcgaa gcgcaagctc gcgaagcgct
     3661 gtgaggttgg cgggggtgaa aaaatgctcc agtgcgcgct cggcctgtcg cgggacgtag
     3721 accttcccct ctttgagccg ctggatgaga tcgtcaggcg tgagatcgac cagttcgacg
     3781 gcgtcggcgc ggtcgaaaac cgaatccggc acggtttcac gcacgcggac gtgggtgatc
     3841 tgggcgacaa tgtcattcaa gctttcgatg tgctgaatat ttaccgtgga atagacatcg
     3901 atgccgtggc tcaatagctc ttcgacgtcc agatagcgct ttgggtgacg actgccggga
     3961 gcatttgtgt gcgcaagttc gtcgaccagg acgatctgcg gccgacgggc gatgatggca
     4021 tcgaggtcca tctcctccag cagctgacct ctgtactcga catgctggcg ggcaatgacc
     4081 tccaggccct ccaacagcgc ctctgtttcc ctgcggccat gggtctcgac gaccccgacg
     4141 atcacatcat agccgtcttt tgttctcgcg cgtgcgctct gcagcatctc gtaggtcttg
     4201 ccgacccccg gcgccgcgcc cacaaagatt ctcagtttac cgacgcggcc ctcctcccgc
     4261 ctggccgctt ctagcaaggc ctccggcgag gggcgctgtt cagggttgcg tcgctgatct
     4321 gccatcaggt gtcagcttct ttagcgtgta cggggcacgg cgagactaac gcgccactgt
     4381 acgatcgaga gccaaattaa gcgccaacac gttcacacgt ggctctccga gcaggccaag
     4441 gaaacgacct tccgtgtgct cttgcaagag ctcgcggaca cgatcctcgg gcaggttgcg
     4501 cgccttcgca acacggggca cctgaaatag ggcggcttgg ggcgaaatgt gcgggtcgag
     4561 gccgctgccc gaagttgtca ccaaatcgat cggaacggct gcggaagg
//
LOCUS       DATILV010000806         3392 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_5048002, whole genome shotgun sequence.
ACCESSION   DATILV010000806 DATILV010000000
VERSION     DATILV010000806.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3392)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3392)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3392
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5048002"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..365)
                     /locus_tag="VLJ17_19655"
     CDS             complement(<1..365)
                     /locus_tag="VLJ17_19655"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011502128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HSV25233.1"
                     /translation="MNAPVTPPTTPPYHHTPLFPLGPDKTPYRKLDVGGVKVEKVMGK
                     DMLVIEREALRALTEAAFTDINHLLRPAHLKQLRKILDDPEASDNDKFVAYDFLKNAN
                     ISAGGVLPMCQDTGTAIIMG"
     gene            453..1739
                     /locus_tag="VLJ17_19660"
     CDS             453..1739
                     /locus_tag="VLJ17_19660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25234.1"
                     /translation="MPITLRLPSCALLAVVSAVQAAPAQAQYTAKDWPEGAMKQRFTD
                     TCGICHDINRVRVGYTPQGWLTVVRMMQNFDTAVPAEEWPAMTEYLMKNFPERQRPSA
                     VILPGPVKARIDMWDVPTQGSRPHDPRAAKDGSIWWTGQLANKLGRIDPKTGAIREYT
                     LKSQYTGPHGLAEDKDGNIWFTGNNLGLIGKLDPKTGVTTEYPLPDKSAKDPHTINIA
                     ADGMVWFTVQGGNMVGRLDPKTGDIKLVTSPTEKSRPYGLMINSKGVPYFVEFGAPKI
                     ASIDPQTMAIKEYPLPNAAARPRRLAFSDDDTIFYTDYPRGMLGRLDLKTGNVKEWES
                     PSGPKSEPYGIVFTKGALWYNESGAKPNTIVRFDPATEKFQSWAIPGGGDIVRNMDVT
                     PDGDPVTANSLTNQVGIVTVEDATPPRRPPTIPEKK"
     gene            complement(1806..2759)
                     /locus_tag="VLJ17_19665"
     CDS             complement(1806..2759)
                     /locus_tag="VLJ17_19665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020175047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5996 family protein"
                     /protein_id="HSV25235.1"
                     /translation="MVSLSNTERWPELPYAAWKDTRDTLQLWTQIVGKVRLALTPWLN
                     HSWHVVLYVTARGLTTSHIPWHAGSFQIDFDFIDHVLWVRTSAGHFRQIMLKPTSVAE
                     FYEDVMIALHELGIDVHITTMPCEIADCVPFDQDTLHAAYDAGYANRFWRILLSASEI
                     FFRFRTCFLGKASPVHFFWGSFDLAVTRFSGRTAPRHPGGVPHLADAVAQEAYSHEVS
                     SAGFWPGGGGPIDYAAFYSYAYPAPEGFGAAKVKPAQAIFSKELSEFLLPYDAVRTAR
                     DPDATLMEFLQSTYDAAADLAKWDRKALECEFGEKGKPRAI"
     gene            2943..3242
                     /locus_tag="VLJ17_19670"
     CDS             2943..3242
                     /locus_tag="VLJ17_19670"
                     /inference="COORDINATES: protein motif:HMM:NF014608.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HSV25236.1"
                     /translation="MGLGFNGGQLLGLAIGGCFCNDLRYVAYDMGVRLASILVDVTVA
                     LEGSPLLATHAMMRVAVTAVDDGADVNGLIRRAQEVSTVANSVKRGLPVQIIAND"
BASE COUNT          698 a         1060 c         1015 g          619 t
ORIGIN      
        1 cccatgatga tggcggtgcc ggtgtcctgg cacatcggca gcacgccgcc ggcggagata
       61 ttggcgttct tgaggaagtc gtaggcgacg aacttgtcgt tatcgctcgc ctccgggtcg
      121 tcgaggatct tgcgcagctg cttcaaatgg gccgggcgca gcaaatgatt gatgtcggtg
      181 aacgcggcct cggtgagcgc ccgtaacgcc tcgcgttcaa tcaccagcat atccttgccc
      241 atcactttct cgaccttgac gccgccgaca tcgagcttgc gatatggcgt cttgtccggg
      301 ccgagcggaa acagcggcgt gtggtgataa gggggcgtgg tcgggggcgt gacgggggcg
      361 ttcatgggtt tgctgaaaga tgtgatggtg aaaaccgtgt atgttacttt ccggtatccc
      421 acaagccaac gctggttcca gggagaacag ccatgccgat cacgctcagg ctccccagtt
      481 gtgcgctgct ggcggtcgtt tccgccgtac aagccgctcc cgcgcaggcg caatataccg
      541 ccaaggactg gccggaaggc gcgatgaagc agcgcttcac cgacacatgc ggcatctgcc
      601 acgacatcaa tcgcgttcgc gtcggataca cgccgcaagg ctggctcacg gtcgtgcgca
      661 tgatgcagaa cttcgatacg gccgtccccg ccgaggagtg gccggcgatg accgaatacc
      721 tgatgaagaa ttttcccgag cggcagcgcc cgtcggcagt catcctgccc ggcccggtca
      781 aggcgcgcat cgatatgtgg gatgtgccga cgcagggctc gcgcccgcat gatccccgtg
      841 cggcgaaaga cggctcgatc tggtggaccg gtcagctcgc caacaagctc ggccgcatcg
      901 acccgaagac cggtgccatc cgcgagtaca ccctgaagtc acagtacacc ggcccgcacg
      961 gcctggccga agacaaggat ggcaacatct ggttcaccgg caacaatctc ggcctgatcg
     1021 gcaagctcga tccgaagacc ggcgtcacca ccgaatatcc gctccccgac aagtccgcga
     1081 aggacccgca caccatcaat atcgcggcgg atggcatggt gtggttcacc gtgcagggcg
     1141 gcaacatggt cggccggctc gatcccaaga ccggtgacat caagctggtc acctcgccga
     1201 ctgaaaagtc gcgaccctac gggctgatga tcaattcaaa aggcgtgccg tatttcgtcg
     1261 aattcggcgc accgaagatc gccagcatcg atccgcaaac catggcgatc aaggaatatc
     1321 ctttgccgaa tgccgccgcg cgtccgcgtc gcctcgcctt ttccgacgac gacacgatct
     1381 tttacaccga ctatccgcgc ggcatgctcg gacgtctcga cctcaagacc ggcaatgtga
     1441 aggaatggga atcgccgagc gggccaaagt cggagcccta cggcatcgtc ttcaccaaag
     1501 gcgcgctctg gtacaacgag tccggcgcca agccgaacac catcgtgcgg ttcgatccgg
     1561 caaccgagaa attccagagc tgggcgatcc ccggcggcgg cgacatcgtg cgcaatatgg
     1621 atgtgacgcc ggacggcgat ccggtcaccg ccaacagctt gaccaaccag gttggaatcg
     1681 tgacagtcga agacgccacg cctccgcgcc ggccgccgac aattccggaa aaaaaatgaa
     1741 tgcagctgac aaactgtccg acgtcctcgg tgtcagccga cgcacctagg ggatttcgag
     1801 cgtgatcaga ttgcccgcgg ctttcctttt tccccaaact cgcactcgag tgccttgcga
     1861 tcccacttgg ccaaatcggc cgcggcatcg taggtgcttt gcaagaactc catcagcgtc
     1921 gcatcgggat cgcgcgcggt acgcacggca tcgtaaggca aaagaaattc gctcagctcc
     1981 ttactgaaaa tcgcctgcgc cggctttacc ttcgccgcgc cgaaaccttc cggcgccgga
     2041 taggcatagg aatagaacgc ggcgtagtcg atcggccctc cgccgcctgg ccagaagccg
     2101 gcgcttgata cttcgtgcga ataggcctct tgcgcgactg cgtccgcgag atgcggcact
     2161 ccgccaggat ggcgcggcgc agtgcggccg gaaaaacgcg tcaccgccag gtcgaagctg
     2221 ccccagaaga aatggaccgg actcgctttg cccagaaagc aggtacggaa gcggaaaaaa
     2281 atttcactcg cggacagcag aatacgccag aagcggttgg catagccggc gtcataggcc
     2341 gcgtgcagcg tgtcctgatc gaacggaacg caatcggcga tctcgcacgg catggtcgtg
     2401 atgtgcacat caatgcccaa ttcgtgcaac gcgatcatca catcttcgta gaactcggcc
     2461 acgctcgtcg gcttgagcat gatctggcgg aaatgccccg cgctcgtcct cacccacagc
     2521 acgtggtcga tgaagtcaaa gtcgatctgg aaacttcccg cgtgccacgg aatatgcgac
     2581 gtggtcagcc cgcgcgcggt gacgtacagc acgacatgcc acgagtgatt gagccatggc
     2641 gtgagcgcga ggcggacctt cccgacaatt tgtgtccaaa gctgcagcgt gtcgcgcgtg
     2701 tctttccatg ccgcataagg cagctcgggc cagcgctcag tattcgaaag cgacaccata
     2761 ccggctcttc ctttcgtcgt gtgcggggcc gattgacgta tactactcat ctccgaagga
     2821 gatgcctgcc catgcccaca atgacggttc aacttcgcag cattcccgat accgaagccg
     2881 ccgttggctg ggccgaaggg cacactattg ttgtagatcg cccggacggc aaagccggcg
     2941 ggatgggctt ggggttcaat ggcggccagc tgcttggctt ggcgataggc ggctgcttct
     3001 gcaacgatct gcggtatgtc gcatacgata tgggcgtccg cctggcatcg atcctggtgg
     3061 atgtaacggt tgccctcgaa ggaagcccgc tgctcgccac ccacgcgatg atgcgcgtcg
     3121 cggtaacggc tgtcgacgac ggtgcggacg ttaatggtct tatccggcgc gcgcaagaag
     3181 tctcgaccgt tgccaactcg gtcaaacgcg gcctgcccgt ccaaatcatt gcaaacgatt
     3241 gagacacgca cccgaccaga gctcgtcctg cctctcgggt tccagccttc tgctggcccc
     3301 agcatgggct ccagggggat ccaccagcga ctatgagtcg cggcatctaa ttaccaaggc
     3361 gcgaatcgag gcgttctata tctcggtcgt ga
//
LOCUS       DATILV010000807         2886 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_966718, whole genome shotgun sequence.
ACCESSION   DATILV010000807 DATILV010000000
VERSION     DATILV010000807.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2886)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2886)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2886
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_966718"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..515)
                     /locus_tag="VLJ17_19675"
     CDS             complement(<1..515)
                     /locus_tag="VLJ17_19675"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSV25237.1"
                     /translation="MTIVSLRRGDAVRTKGSLDDGPGESFDQEPRIDGENNMVPGQDD
                     HARFTRLVLPYLGDAYSLARWMTGNRADAEDVVQDACLRAFRALGSVTDDRARPWVLT
                     IVRNTAYTWLRKNRPSAVLVVEDLEDVEAANADPGDPDSETPETALIAKADAACLQAA
                     IAALPTAYRET"
     gene            1205..1348
                     /locus_tag="VLJ17_19680"
     CDS             1205..1348
                     /locus_tag="VLJ17_19680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25238.1"
                     /translation="MTNRWLIRIPSADASGLVADRLAGDFDRRRDDEDWVDVTVSEGT
                     PSL"
     gene            complement(1789..2142)
                     /locus_tag="VLJ17_19685"
     CDS             complement(1789..2142)
                     /locus_tag="VLJ17_19685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25239.1"
                     /translation="MNFRKLLVLSAAAVGCSAQPGLANPCSRDIDRAWVQVNAKIQAR
                     VGAGRSAPQSTIALLHRQPTPSSMTAAEEALVDVWLPMETAVAALARAREADRANNRI
                     ACEGALAEAQRVIGR"
BASE COUNT          563 a          853 c          861 g          609 t
ORIGIN      
        1 atcgtctcgc ggtaggccgt tggcagagcc gcgatggccg cctgcaggca ggcggcgtcg
       61 gctttggcga tcaacgccgt ttccggcgtt tcgctatccg gatccccagg gtccgcattc
      121 gcggcctcga catcttcgag atcctcgacc acaagaacgg ccgacgggcg gttcttccgc
      181 agccatgtat aggcggtatt gcgcacgatg gtcagcaccc atggacgcgc cctatcatcc
      241 gtaacgctgc cgagggcgcg gaacgcgcgc aggcaagcgt cctgcaccac atcttcggcg
      301 tcggcgcggt tgccggtcat ccagcgcgcc agcgagtagg catcgccgag atacggcagc
      361 accagccggg tgaaccgcgc gtggtcgtcc tggccaggca ccatgttgtt ttcgccatct
      421 attcgcggct cctgatcgaa actctcgccg ggaccatcgt ccaggcttcc cttggtccgg
      481 accgcatcgc cgcggcgaag gcttactatg gtcatccaat gcccttcctt ggaatgaagc
      541 tcgtcgatcc ggcgatttca cttgacgttc ttgcatctcg gcggccacgc gacattgccc
      601 ctgatcgcca tttcgacggt ctggcgacgg acgcgcctat gccgctcgtc gtcggaacac
      661 gcggcgtccc cgtgatcgac gcccgaacta gtcgccgcag gactgacaac taacgcagca
      721 ccggctcgcc cagccgccct tgaaagtttg cattcatgct caggagaccg agctagggat
      781 cgacttattc ccaccttcga cggataaatt tttcaattgg actgagggtg gggcgacgtc
      841 ggccctcctc gtgccggctc tacatcgtga tcaccaattc ggtcggaagg gacgaatcgg
      901 ccataagcac gggagtgaga gatctgcggc ctggggttca tgctcttgga atcgcaccac
      961 tgaaagccat tcggacccca gtcctcggtc gcagcaaacc cgcactccgg ctgagcagtt
     1021 cgattgctca ggcttggctg catcgggtat tgacctgtat acgaccagtc ccgggcactg
     1081 gtcgtataca gatattgtgg gctagcgaag gtttgtgcga atgatgccgt cgaggcgacg
     1141 aacacaccgg cagcaagcgc cggcagaaat aggcccattt tcattgtatt ctccattctt
     1201 tttgatgact aataggtggc tgatccgtat tccgagtgcc gacgcgagcg ggctcgtggc
     1261 cgacaggctt gcgggcgatt tcgatcggcg ccgggacgat gaagattggg ttgacgtcac
     1321 ggtgtcggaa ggcacaccga gtttatgaat cgtgaggcag acgtcccgcc tgcgcaaagc
     1381 ctagctcgcc tcacaaaagc cgagctcacg ggagcgatgc gaaatcgtgg cgatgatgat
     1441 cgtgcgtttc gtcatgatgt gtttccttcg atgttgatgg caacgagacc cagcgtctcg
     1501 cgataaaatt cccttcgcga tgtcggttgc ggtagagcgg atgcgcgcgg ttgcagcagc
     1561 caggtgaaaa gccggtcggc gcacgcaaga gaattttttc tgatctaaga agttacggat
     1621 tgacatcaaa acgatgtaag gcgtcgatgc ggaccaatcg caatgccttg ggcatccgcg
     1681 gatttggtca tcaattgtga cgtcgcagct gtgctgatcg ccgggtgaac ccgatcacgc
     1741 tggcccattt tggtcaccgc atttgacgca agcgcgatgt ggccgccatt accggccgat
     1801 cacacgctgc gcctccgcga gagccccctc gcaagcgatc cgattattgg cgcgatccgc
     1861 ttcacgagcg cgagcgaggg ccgccacggc cgtctccatc ggcagccaga cgtcaacaag
     1921 agcttcctcg gccgccgtca ttgaactcgg cgtcggctgg cgatggagca gggctatcgt
     1981 gctttggggc gcggaccgcc cggcgccgac cctcgcctgg attttagcat tgacctggac
     2041 ccatgcgcgg tcgatgtccc gtgagcaagg gttggcgaga cccggctgtg cggagcagcc
     2101 gacagctgcc gcacttagaa ccagcagctt acgaaagttc atggcttggt ctcctggatc
     2161 gatgatgtac acgtgggcgc taaacatggc gatacgtcac caccaccgcc attcgggttt
     2221 gttcttgcgc ttccatacac gtgcactctc cgcgcccaaa taccggggat tattgatgca
     2281 caattcacga tattcgcatt ggtctctcga gctgatatag caattcatcc ctcctccgtt
     2341 cgatgaactg atttggcagt agggatagag ctgcgaggca taaacccacg cctcactcgc
     2401 gcgcggattc gcaacgagaa tcgttgcgat gccgcagagt gtcgcgacaa cagcggttat
     2461 tttcatgtcc agtttcctgt tttgcgtccg gaacgcatcg gttgatccgc tcggcaacga
     2521 tgtgcgtgac gcattaaagg acagaggtgt gctgcgcgat attccagggt ttgttcagaa
     2581 ttgcgatgcg cggcggactt ctcacattgg attaagattc cgaacacgcg ccagtcgcgt
     2641 caacgcgcaa cggcttccgt cttgcgatgg aagccgttgg tcgagggagg gacagagtta
     2701 aaacggattt caatcaactg caatcacgtg ccgggtgcaa aggccggcgt tttgcagcgt
     2761 gcctacgagg atgcggagag tgggcacgct tcgccatgcc caccccacgc tgcgtcgatt
     2821 tcatcgggac gtggcatatt ggccgtcgcg caggatctca aaccggacat tcgcgtcagg
     2881 atcacg
//
LOCUS       DATILV010000808         7489 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_192647, whole genome shotgun sequence.
ACCESSION   DATILV010000808 DATILV010000000
VERSION     DATILV010000808.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7489)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7489)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7489
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192647"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..833
                     /locus_tag="VLJ17_19690"
     CDS             <1..833
                     /locus_tag="VLJ17_19690"
                     /inference="COORDINATES: protein motif:HMM:NF012363.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="carboxylesterase family protein"
                     /protein_id="HSV25240.1"
                     /translation="VALRALTPEASGATARALLDQLGVAARDLDRIRDIPFEHVLAAL
                     GAARPPLGFGPVVDGRSLPRHPFDPDGPEISAGTPLLLGSNLTERTFFGDTPLDAIDD
                     AALLGHVKRYTGLVDAQAAHLIAAYRKNRAGADNIFIYQLISADWWMTANVITQAERK
                     AKLGRAPAYVYHFEKRTPVRDGKLKVPHTLEIAYAFDNIDLSTAVTGTGPDKQALADK
                     MSAVWTAFARTGDPSIPGLRWEPYSAEHRAIMIFDDEPRLELDPYREERLAISAVKSS
                     "
     gene            complement(994..2601)
                     /locus_tag="VLJ17_19695"
     CDS             complement(994..2601)
                     /locus_tag="VLJ17_19695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase N-terminal
                     domain-containing protein"
                     /protein_id="HSV25241.1"
                     /translation="MQTAARREAPEAFAKEPQTIGQMAVEKPQTGEAYLASLQDGREV
                     FIYGERVADVTVHPAFRNTARMVARLYDALHDPAHRDKLVLPTDTGNGGVTQAFFKAP
                     KTPAELLAGRTAIAEWAKLTYGWMGRSPDYKAAFLATLGANADFYDPYQDNARRWYKF
                     SQERVPFINHAIIHPPIDRDRPPNEVGDVCCHVEKETDAGIVVSGAKVVATGSVLTNY
                     TFVAHHGLIPVQDKKFAVVFMVPTNTPGVKFICRASYEMAATAMGSPFDYPLSSRLDE
                     NDAVFILDKVLVPWENVFVYGDVEKANNFFPRTGFLPRFVVHGCTRLAVKLDFICGLL
                     LKATEAAGTKDYRGVQANVGEVIAWRNLFWGLSDAMVRDPRPWIGDYLLPNMDPGNAY
                     QIIATMAYTRIKYLIEQTVASGMIYLNSHVSDFKNPEIRPYLEQYLRGSNGYKAEERV
                     KLLKLLWDCMASEFGGRHELYEINYGGSTEEIRRYCLFGAQASGNADRFKGFAEECMA
                     EYGLDGWRVPDLSDPGDLSYHVLRRGA"
     gene            complement(2821..3654)
                     /locus_tag="VLJ17_19700"
     CDS             complement(2821..3654)
                     /locus_tag="VLJ17_19700"
                     /inference="COORDINATES: protein motif:HMM:TIGR02431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator C-terminal
                     domain-containing protein"
                     /protein_id="HSV25242.1"
                     /translation="MKRGKSAAPRSLRAAAMATAKAEHSPVNDKEFMLTLAKGLAVLE
                     AFGRDRSTLTLSQAAQAVDLSRATARRALHTLVGLGYVEQNGRQFALSPRIMRLGFAY
                     IWSQSWVDRAMPLMKTLSERFHESCSAAILEGTEIIYVARIPAHRIISAAIAVGSRLP
                     AFHSSMGRIQLGFLCDHEIWRRLKSVRIDPLTPATITDLQALHERVRDDHRQGFSIVD
                     EELERGLRSIAVPVVDRDGQCVGALNLSTHSTRTTRNELREAFLPELKAVAEQVSALV
                     F"
     gene            3818..5140
                     /locus_tag="VLJ17_19705"
     CDS             3818..5140
                     /locus_tag="VLJ17_19705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009026053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV25243.1"
                     /translation="MTAHQRRGIDRRTLIKYSAAGSVALAAGAVRAPAIAQAKTIKLG
                     YVSPQTGPLAAFAEADNFIIVSFKDALKSGLRIGATTYAVEVVVKDSQSNPNRAAEVA
                     KELIVRDKIDLMLVASTPETTNPVSTQCEIEEVPCISSVAPWQPWFIGRQANPAGGPP
                     AWKPFNYTYHFFWGLEDVIAVFTNMWDQLQTNKSVGGLFPNDGDGNAWGDKQVGFPPV
                     LDKQGYRLTDPGRYQNLTDNFSAQIGAFKGANCEIITGVVLPPDFTTFWKQALQQGFK
                     PKIASIGKAILFPVAVEALGRDGHNLSSEVWWSPSHPFKSSLTGMTAQALAAAYEGAT
                     RKQWTQPIGFVHALFEVATDALKRTPQVGDGKATLAAIAATNLDTVVGKVAWNGANLP
                     PFAAKNVAKTPLVGGQWRVKDGNKYEIVITDNKTAPVIPVAGKMEAIA"
     gene            5323..6189
                     /locus_tag="VLJ17_19710"
     CDS             5323..6189
                     /locus_tag="VLJ17_19710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003554581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSV25244.1"
                     /translation="MGWIDTVIQGVLLGGLYALFAAGLSLIFGIMRLVNLAHGDLIVL
                     AAFVILAVAHAIGLDAFTATAVALPLMFATGYGLQFAVLNRTLGPDILPPLLVTFGLS
                     IIIQNSLLEMFSADSQRLSAGAIETASIPLGGGLAVGMMPLIAFASAIAVILLLNALF
                     YRTALGRVFRATSDDADIAQLMGIETRGIFAMAMAVAMVVVTIAALHLGMRATFDPTI
                     GPARLLYAFEAVIIGGLGSLWGTLAGGVIIGVAQTVGANINPEWQILAGHLAFLAVLM
                     LRPRGLFPRMVN"
     gene            6255..7355
                     /locus_tag="VLJ17_19715"
     CDS             6255..7355
                     /locus_tag="VLJ17_19715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007603180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSV25245.1"
                     /translation="MPRVAIATTISRVFASASCLLVVALIALPVIATRSLVQDLVFIF
                     YMFTLAQFWNLLAGYAGLVSVGQQTFVGLGGYLLFALTVMVGLDPLAAILLSGIIAAV
                     LAVPTAFVVFRLQGAYFAIGTWVMAEVYRLVFAQVKQLGGGTGTSLPPMVTNSVVGID
                     WIRQALDLRTPAARDVLTYWAALAVAVGSALAIYLVLRSRRGLALAAIRDSNAAAQSV
                     GVDIFRAKLWIYIFAAAGTSMVGALIYLQKARISPDAAFSVLDWTAYVIFIVVIGGIG
                     TLEGPIIGVMVFYLMQTYLAGFGSWYLILLGTLAIATMLFAPKGIWGHFSQRTGVLLF
                     PVQRRISTSVGPRHRRTTVLRDPLETCANEKM"
BASE COUNT         1325 a         2339 c         2316 g         1509 t
ORIGIN      
        1 gcgtcgcgtt gcgtgccctg acgccggaag cctcaggcgc gactgcgcgg gcgctgctcg
       61 atcagcttgg tgtcgccgcg cgcgatcttg atcggattcg agacatcccg ttcgagcacg
      121 tcctggccgc gctcggtgcc gcgcgtccgc cgctcggatt cggcccggtg gtcgacggtc
      181 gatcgctgcc acgccatccc ttcgatcccg acgggccgga gatctccgcg ggcacaccgc
      241 tcctgctcgg cagcaatctc acggaacgta ccttctttgg cgacacgcca ctcgatgcga
      301 tcgacgacgc agcgttgctt ggccacgtca agcgctacac gggtcttgtc gatgcgcaag
      361 ccgcgcacct gatcgcggct tatcgaaaga accgcgcggg cgccgacaac atatttatct
      421 atcaactcat ttcggcggat tggtggatga ccgcgaacgt catcacccag gccgagcgca
      481 aggccaagct cggtcgcgcg ccggcctatg tgtatcactt cgagaagcgt acgccggtgc
      541 gtgacggcaa gctgaaggtg ccccacacct tggagatcgc ctatgcgttc gacaatatcg
      601 acctgtcgac cgcggtgacc ggcaccgggc cagacaagca ggcgctcgcc gacaagatga
      661 gcgccgtctg gaccgccttc gcccgcaccg gcgacccgag cattccgggg ctgcggtggg
      721 agccctattc ggccgagcac cgcgccatca tgatcttcga cgatgagccg cgacttgaac
      781 ttgaccccta tcgcgaggaa cgcttggcga ttagcgcggt gaagtcgagt tagtggagtc
      841 gtgccgacgc ggcgatggcg gattgctccc ctctctgttt tggcagggca atcgcatctg
      901 gcaccggcgc cgccttcgcg gtggaatcgt agcgagaaca gagccaaatc gaatgcgcaa
      961 cagagcctgc aattgtggac caaaaattcg cgatcatgcg cccctgcgca gcacgtgata
     1021 gctcaggtcg cccgggtcgc tgaggtcggg gacgcgccag ccgtcgaggc cgtattcggc
     1081 catgcattct tcggcaaatc ccttgaagcg gtccgcattg ccggaggcct gggcgccgaa
     1141 caggcagtaa cggcgaattt cttcggtcga gccgccgtag ttgatctcgt agagctcgtg
     1201 ccggccgccg aattcgctgg ccatgcagtc ccacaacagc ttgaggagct tgacccgttc
     1261 ctcggccttg tagccgttgg agccgcgcag atattgctcc agatagggcc ggatttccgg
     1321 gttcttgaag tcgctgacgt gggagttgag atagatcatg cccgatgcca cagtctgctc
     1381 gatcagatat ttgatccgcg tgtacgccat ggtggcgatg atctgatagg cgttgccggg
     1441 atccatgttg ggcaggaggt agtcgccgat ccagggccgc ggatcgcgca ccatggcatc
     1501 ggacaagccc cagaacagat tgcgccaggc gatgacctcg ccgacattgg cctgcacgcc
     1561 gcggtaatcc ttggtgccgg ccgcctcggt ggccttgagc aacaggccgc agatgaagtc
     1621 gagcttgacg gctaggcgcg tgcagccgtg caccacgaat cgcggcagga acccggtgcg
     1681 cggaaagaaa ttgttggcct tttccacgtc gccgtagacg aacacgtttt cccaaggcac
     1741 cagcaccttg tcgaggatga acacggcgtc attctcgtca agacggctcg acagcgggta
     1801 atcgaacggg ctccccatgg cggtcgcggc catctcgtag gaggcgcggc aaatgaactt
     1861 gacgccgggg gtgttggtcg ggaccatgaa caccacggcg aatttcttgt cctgcaccgg
     1921 gatcaagccg tggtgggcaa cgaacgtata gttcgtcagc accgatccgg tggcgactac
     1981 cttcgcgccc gacaccacga tgccggcatc ggtttccttc tccacatgac agcagacgtc
     2041 gccgacctca ttgggaggac ggtcgcggtc aatcggcgga tggatgatgg catggttgat
     2101 gaaggggacg cgttcctggc tgaacttgta ccagcggcgc gcattgtcct gatagggatc
     2161 gtagaaatcc gcattggcgc ccaaagtggc aaggaacgcc gccttgtagt cgggcgaacg
     2221 gcccatccaa ccgtaggtga gcttggccca ttccgcgatg gcggtgcggc cggccaagag
     2281 ttcggccggc gtcttcggcg ccttgaagaa ggcctgcgtc acgccgccat tgccggtgtc
     2341 ggtcggcagc acgagcttgt cccgatgcgc ggggtcatgc agcgcgtcgt aaaggcgggc
     2401 caccatacgg gcggtgttgc gaaaggccgg atgaaccgtc acatcggcaa cgcgctcgcc
     2461 atagatgaag acctcgcggc cgtcctgaag cgaggcgaga tacgcctcgc cggtttgcgg
     2521 cttctccacc gccatttggc cgatggtttg cggctccttg gcaaatgctt ccggtgcttc
     2581 acgccgcgcc gccgtctgca ttgcgtcctc ccctgagtta tggcccgccg cgcggatgcc
     2641 gacgtcgccg atatagttcg gatatcgaac gtttgtacag tatgcgaact acagtcacga
     2701 tatcgttcgg ttgacgggct gacaagtcgg tggatttttg cccgggcgac cctcgcctgg
     2761 atttctcaaa cagtcggcta aggtcgcccc ctacatcatc ctccacaggg ggagaagcgt
     2821 tcagaacacc agcgccgaca cctgttccgc cacggctttg agctcgggca agaaagcttc
     2881 gcgcagctca ttgcgggtgg tgcgcgtcga gtgggtggac agattgagcg cgcccacgca
     2941 ctggccatcg cgatcgacca ccggcaccgc tatggagcgc aggccacgtt caagctcctc
     3001 gtcgacgatg gaaaagcctt ggcggtgatc gtcacggacg cgttcgtgca gagcctgcag
     3061 atccgtgatg gtcgccggcg ttagcgggtc gatgcgcacc gacttgagcc ggcgccagat
     3121 ctcgtggtcg cagagaaacc cgagctggat tcggcccatc gatgaatgaa acgccggcag
     3181 tcggctgccc accgcaatgg ccgccgatat aatgcggtgc gccggaatcc gcgccacgta
     3241 gatgatctcg gttccttcca gaatcgctgc cgagcaggat tcgtggaagc gctcggagag
     3301 ggtcttcatc agcggcattg cacgatcgac ccagctctgg ctccatatgt aggcaaagcc
     3361 aagccgcatg atgcgcggcg acagggcgaa ctgccttcca ttctgctcca cgtaaccgag
     3421 cccgaccagc gtgtgcagcg cccgtcgcgc agtggcgcgg gacagatcga cggcttgtgc
     3481 ggcttgcgac agcgtcaggg ttgaacgatc gcggccgaat gcttccagca ccgctagccc
     3541 cttggcgagc gttagcatga actccttgtc attgaccgga gaatgttctg ccttggccgt
     3601 cgccatggcg gcggcccgta gcgatcgcgg ggcggctgat tttccgcgtt tcattgcgcg
     3661 tcctgcattg acttcgcgct ggctctcggg gacaatctgt cgataatcga acgatagttc
     3721 gattatcgaa cgaaactggg gcgcggtcaa gtgccccgcg aatgcctgag cctgcggttc
     3781 aggcccagat ttttcgccca attcctgcgg ggaggatatg actgcacatc agcgccgcgg
     3841 catcgaccgc cgaacactca tcaaatattc cgctgcgggc agcgtggcgc ttgccgcggg
     3901 cgccgtccgg gcacctgcga tcgcgcaagc gaagactatc aaactcgggt atgtcagccc
     3961 gcagaccggg ccgctcgcgg cctttgcgga ggccgacaat ttcatcatcg tcagcttcaa
     4021 ggacgcgctt aaaagcggcc tgcggatcgg ggccacgact tatgcggtcg aagtggtcgt
     4081 caaggacagc cagtcaaatc caaaccgcgc cgccgaggtg gcaaaggaac tgatcgtccg
     4141 cgacaagatc gatctcatgc tggtcgcctc gacgccggaa accaccaacc cggtctcgac
     4201 ccagtgcgag atcgaggaag tgccctgcat ttcctcggtg gcgccgtggc agccctggtt
     4261 tatcggtcgg caggcaaacc ccgccggcgg cccgccggcg tggaaaccgt tcaactacac
     4321 ctatcatttc ttctggggat tggaagatgt catcgcggtc ttcaccaaca tgtgggacca
     4381 gctgcagacc aacaagtcgg tcggcgggct gtttcccaat gatggcgacg gcaatgcctg
     4441 gggcgacaag caggtgggct tcccaccggt tctcgacaag cagggctacc ggctcaccga
     4501 cccggggcgc tatcagaatc tcaccgataa tttttccgcg cagatcggcg cgttcaaggg
     4561 cgccaattgt gagatcatca ccggcgttgt gctgccgccc gactttacca cgttctggaa
     4621 gcaagccttg caacagggct ttaagccgaa gatcgcctca atcggcaagg cgatcctgtt
     4681 tccggtcgcg gtcgaagcgc tcggccgcga cggccacaat ctgtcgtcgg aagtgtggtg
     4741 gtcgccgagc catccgttca aatcatccct caccggcatg acggcacagg cgctcgccgc
     4801 tgcctatgag ggcgcgacgc gcaagcaatg gacccagccg atcggattcg tgcacgcatt
     4861 gtttgaagtc gcgaccgatg ccctcaaacg caccccgcag gtcggcgacg gcaaggcaac
     4921 gcttgctgcg atcgcggcga ccaacctcga caccgtggtc ggcaaggtgg catggaacgg
     4981 cgcgaacctg cccccctttg cggccaaaaa cgtcgccaag acgccgctcg tcggcggcca
     5041 atggcgcgtc aaggacggca acaagtacga gatcgtcatc acggacaaca agaccgcgcc
     5101 ggtcattccg gtcgccggca agatggaagc gatcgcttag tgcagattcc ggtgatattg
     5161 aatcatttct ctggagtcag ggccgggctt gtcccggcca tccactcctt gcttgctgca
     5221 gttcggcaag aaagacgtag atgcccgcga cgaacgcggg cctgacgcag gagaggtgat
     5281 tcgattgcac cataactgct ctagtgccgt gaccgcatgt tgatcggctg gatcgacaca
     5341 gtcatccagg gcgtgctcct gggcggcctc tacgcgctat ttgcggcggg attgtccctc
     5401 atcttcggga ttatgcggct cgtcaatctg gcccatggcg atctcatcgt gctcgcggcc
     5461 tttgtcattc tggcagtcgc gcacgcgatc ggcctcgacg ccttcacggc gaccgcggtg
     5521 gcgctgccgc tgatgtttgc gaccggctat gggctgcaat ttgcggtgct caatcgcacg
     5581 ctcggccccg acatcctgcc gccgctgctg gtgacgttcg ggctttcgat cattatccag
     5641 aatagccttc tggagatgtt ttctgcggac agccagcggc tctctgccgg tgccatcgaa
     5701 accgcttcca tcccgctcgg gggcggactt gcggtgggca tgatgccgct tatcgccttc
     5761 gcctcggcga tcgctgtgat cctgctgctc aacgccctgt tctaccgcac tgcgcttggc
     5821 cgcgtcttcc gggcgacctc ggacgatgcc gatatcgcgc aactcatggg catcgaaacg
     5881 cgcggtattt tcgctatggc tatggcggtc gctatggttg tcgttactat cgcggcgctc
     5941 catctcggca tgcgcgcgac gttcgatccc actatcggtc cagcgcgcct gctctatgcg
     6001 ttcgaggcgg tgatcatcgg cgggctcggt agcctttggg ggacgctcgc tggcggggtg
     6061 atcatcggcg ttgcccagac agttggtgcc aacatcaatc ccgaatggca aatcctggcc
     6121 gggcatctgg catttctcgc agtgctgatg ctgcggccgc gcggcctgtt cccgcgcatg
     6181 gtaaattgaa aaccatggcg accgtcattt cgccccatcc ccaacctctc tccatagagg
     6241 gccgagaggg ggctgtgccc cgcgtcgcaa ttgccaccac gatctcgcgc gttttcgcgt
     6301 cagccagttg cctgcttgtg gtagccctca tagcgctgcc tgtcatcgcc acccgcagcc
     6361 ttgtgcagga cctggtcttc attttctaca tgttcaccct ggcgcagttc tggaatctgc
     6421 tggcgggcta tgcgggcctg gtgtcggtcg gccagcagac attcgtgggg cttggtggtt
     6481 atctgctgtt tgccctcacc gtcatggtcg gactcgatcc tctggccgca atcttgctct
     6541 caggcatcat cgcggccgtc ctcgccgtcc caacggcctt cgtggtgttt cgtctacaag
     6601 gcgcttattt cgccatcgga acctgggtca tggccgaggt ctaccggctt gttttcgccc
     6661 aggtgaagca gctcggtggc ggcaccggca catcgttgcc accgatggtg acgaattcgg
     6721 tcgtcgggat cgattggatc aggcaggccc tcgacctgcg tacgccggcg gcgcgcgacg
     6781 tgcttaccta ttgggccgcg cttgcggttg cggtcggcag tgcgcttgcg atctacctcg
     6841 tgctgcgctc gcggcgtggg ctcgcgctcg cagcaattcg cgactcaaat gcggcggccc
     6901 aaagtgttgg cgtcgatatc ttccgcgcca agctctggat ctatatcttc gcggccgccg
     6961 gtaccagcat ggtgggtgcg ctcatctatc tgcaaaaggc ccgtatctcg cccgatgctg
     7021 cgttctcggt tctcgattgg accgcctatg tgatcttcat cgtcgtcatt ggcggaatcg
     7081 gaacccttga aggcccaatc attggcgtta tggtgttcta cctgatgcag acctacctgg
     7141 ccggtttcgg cagctggtac ctcatcctgc ttggcacgct cgcgatcgca acaatgctgt
     7201 ttgcgcccaa ggggatctgg gggcattttt cgcagcgcac cggcgtcctg ctgttccctg
     7261 tacagaggcg aatctccacg tcagtcggac cgcgacatcg ccggaccacc gtgttacgcg
     7321 accccttgga gacatgcgcc aacgagaaaa tgtagagtgg cgctttgagg gccagtgcta
     7381 caacttgaaa gcccctccgg gttggcgttc tcaacgttga caaccgcgcc cggcctccct
     7441 taagtgcttg cggtcagccc agatggcgga attggtagac gcgctggtt
//
LOCUS       DATILV010000809         2572 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_192765, whole genome shotgun sequence.
ACCESSION   DATILV010000809 DATILV010000000
VERSION     DATILV010000809.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2572)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2572)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2572
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192765"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(663..>2572)
                     /locus_tag="VLJ17_19720"
     CDS             complement(663..>2572)
                     /locus_tag="VLJ17_19720"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="vanadium-dependent haloperoxidase"
                     /protein_id="HSV25246.1"
                     /translation="YINALVGPTVAQMNDVKAQIGKINAELAALGTTASVTAGISLGT
                     AAGNAMLAVAANDGGYAASLQTLTPYIPPNEGNPGVYVPPSNRPAMTPTWGSVQPIGI
                     SSVTLAGLKATVPVAYAATSQGLTSQAYSLQVLQTECQGSGTGLPSNVASACRAAGFA
                     PASAAEEQAALFWNDPGGTLQPPGHWLQIADTIAIQEELDLLDTARATAMVGLALHAA
                     GIGAWTIKYEDVAWRPVSAIRDCTAWSPDFSSCDSIWSSLIATPPHPDYLAGHPAFSG
                     AAATALAAVLGSDSVTFTSTSNAYCNAGSTTRDSLGNVVSCTINGTTYSIATAGCANG
                     GTLVYDTTGTVTGCTLNGIPQTVIGGGCNNAGLVSVLNSDYTANPAYNGSPLICPIAE
                     TYTSLSQASGGFLGAEFSRVVGGIHTPAAVAQALALGNDIGNFIVPVALTSGRSCNGN
                     YDGVFNGNVTVSAGQNCVLTSPCEIKGDINVTGGSFVLACTVDGNVTISGNSAFSLHG
                     ASIGNNLHIQSLLAGQPQGAVCGSMIKGNLVVQNNASPVEIGANNANACAGNTVRNNL
                     QVRNNSASTSIGYNNVSGNLQVNNDTATTDVSGNMVGKNLLCQNNTPAVTHIALNMVQ
                     GQAQGQCAAAR"
BASE COUNT          447 a          796 c          840 g          489 t
ORIGIN      
        1 accatcggtc acgggaaaac acgcttatgg ggtggttgcg gagtcggtct ctcggcccat
       61 tccacacttc accgattgac ccatcctgcc acctcctggc tgcgagccga ccgctggctc
      121 cgttcggtaa ggcggtgcac accgacacag acgcgagcgc ggttggggac gatgccggcg
      181 caacgcgcgc gtgcttcagc actgcctcag tgagcagacc ctctgccggc gcgactgcgg
      241 gcctcttcag tgccaattgc cgacatctgg cgaacttcct cgagccacgg cagtcgaacc
      301 ctcgcaatca tcgagcctgg gtgacggctc atgccccgtt tcggtgcgct cgtgcgcacc
      361 agcgtgcgcc agcgcccttc cggccattct agacgatccc atgttcgggc tcgacctgac
      421 cgacgacgaa acggcgaaac aggatctcgg cgagcttggc gggctcgggg ctgactacga
      481 aacctagcac gctgcggaag aagtcggctc cgcggcgaag ccatacaaga tagggtttcg
      541 ttcgcgaagg aggccctgct attgtgccaa agaaggagac gcgagcgcag cgccggcgat
      601 ccaacgcccc tgagtgccgt tcgcgacgcg gcggttggcg ggtgagttag gagcgcctgt
      661 ctctaccgag cggcggcgca ttgaccttgc gcctgcccct gcaccatgtt cagcgctata
      721 tgcgttaccg ccggggtgtt gttttggcat agcaggttct tgccgaccat gttgccggaa
      781 acgtcagtcg tggccgtgtc gttgttaacc tgcaggttgc cgctgacatt gttgtaaccg
      841 atcgacgttg aggcggaatt gttgcggacc tggagattgt tgcggaccgt gttgccggca
      901 caggcattcg cattgttggc gccgatttcg accgggctcg cattattctg gacgactaaa
      961 ttgcccttga tcatgctccc acaaacagca ccctgcggct ggccggccaa gagcgactgg
     1021 atatgcaaat tgttgccgat cgaggctccg tgaaggctaa aagcactgtt gcccgagatt
     1081 gtaacattgc catccacggt gcaagcgagg acgaagctgc caccggttac gttgatgtcc
     1141 cctttgatct cgcaagggct cgtcaatacg caattctgcc cggccgagac ggttacattg
     1201 ccgttgaaga cgccgtcgta attgccgttg cagcttcgcc cggaggtgag agcgacagga
     1261 acgataaagt tgccgatgtc attccccagc gccagcgcct gcgcgaccgc ggcaggggtg
     1321 tgaatgccgc cgacgacccg gctgaattcc gcgcccagga acccgcccga agcctgcgac
     1381 aggctcgtat aagtctcggc gatcgggcag atcagcggac tgccgttata cgccggattg
     1441 gcggtgtaat cggagttgag cacggacact aagcccgcat tattgcaacc gccgccgatc
     1501 accgtctgcg ggatgccatt cagcgtgcac ccggtaaccg tgccagtggt gtcataaacg
     1561 agcgtcccgc cattggcgca ccccgccgtc gcgatcgaat aggtcgtgcc gttgatcgtg
     1621 cagctgacca cgttgccgag gctgtcgcgc gtcgtcgaac cggcgttgca ataagcgttg
     1681 gaggttgagg tgaacgtgac gctgtcgctg ccgaggacag cggcgagcgc ggttgcggcg
     1741 gcgccgctga aggcgggatg gccggcgagg taatcgggat ggggcggtgt cgcgatcaac
     1801 gacgaccaaa tcgaatcgca gctgctgaag tctgggctcc aagcggtgca atcccggatg
     1861 gcactcacgg gccgccatgc aacgtcctca tacttgatcg tccaggcgcc gatgcccgcg
     1921 gcgtgtagcg cgagaccgac catggctgtc gcgcgcgcgg tgtccagaag gtcgagttcc
     1981 tcctggatgg caatggtgtc ggcgatctgc agccaatggc ccggcggctg cagcgtaccg
     2041 cccggatcgt tccagaacag tgcggcctgc tcttctgcgg cgctcgccgg ggcgaaaccc
     2101 gccgccctgc aggcgctcgc gacattgctc ggtaagccgg tgccggagcc ctggcattcc
     2161 gtctgcaata cttgcaggga gtaggcttgc gaggtaaggc cttggctggt cgccgcgtag
     2221 gcgacgggga ccgtcgcctt gaggcccgcc agggtcacgc tactgatgcc gatcggttgc
     2281 acactccccc aggtcggggt catcgccggg cggttgcttg gcggcacgta gacccctgga
     2341 ttgccctcgt tcggcgggat gtatggggtc agcgtctgca ggctcgcggc gtagccaccg
     2401 tcattggcgg cgaccgcaag catcgcgttg ccggcggcgg tgccaagcga gattcccgcc
     2461 gtgaccgagg cggtggtgcc gagcgccgcg agctcggcat tgatcttgcc gatctgcgcc
     2521 ttgacgtcat tcatctgcgc gacggtcggc ccgaccaacg catttatgta gc
//
LOCUS       DATILV010000810         2000 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3267750, whole genome shotgun sequence.
ACCESSION   DATILV010000810 DATILV010000000
VERSION     DATILV010000810.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2000
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3267750"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(575..748)
                     /locus_tag="VLJ17_19725"
     CDS             complement(575..748)
                     /locus_tag="VLJ17_19725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25247.1"
                     /translation="MNIDPITTAIIAILFALIFAAIQLAINYGKPPRPHNRSDAHRRG
                     RPPPDEYPRFPPY"
     gene            1338..1592
                     /locus_tag="VLJ17_19730"
     CDS             1338..1592
                     /locus_tag="VLJ17_19730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011970279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSV25248.1"
                     /translation="MLTAAQMRAARALVGMDQKALAEASGVSLPTIQRMEASNGVVRG
                     VIESLTKVMAALEASGIEFINEGAVSGGGGRGVRLRNRIG"
BASE COUNT          403 a          567 c          604 g          426 t
ORIGIN      
        1 aaaggctatc aagccgatgg ctattacggc gaccccgaag gcgatgagta gaatgtcctc
       61 ccgtcgcatt agctcgctcc ccgacgacct tctgtctccg gatcgcccct tgacgtaaat
      121 tttttcctga gcggcacgag agaccacctt accagtgatc agaagatatc gaccgggcag
      181 ccccgttaac acatttccga cgcatttttg caaggttcgc gtaagcttat gataatgttc
      241 tggtaagctt cggctgtgac gcggtttggc ctcagtgcag gcgtctcgat ttcacacggc
      301 cgaccgggca gcgcggcagt tagacgagtc cacagcgtgc tgaaccctct gccgatgacg
      361 ttgacaaagc tctgcgtctg gtcaggaact tcagcggctc tggtgccttt tggccgaacg
      421 tcgcgcccac gtgatccaac agatccatcc cgatgtcgtg gcggcctacc acacccttgc
      481 ggctccggca tcgggttaag cccttgcatt ccttagaatg ggcgaggagt cccaagaact
      541 cggtcaaact atcggccatc gtcggttttg agcctcagta cggtggaaac cgaggatatt
      601 cgtcgggcgg cggccggccg cgccgatggg cgtcgctgcg gttgtgcggc cgcggcggct
      661 tgccgtagtt aatcgcgagt tggattgcgg cgaagatcag cgcgaatagg atcgcgatga
      721 tcgctgtcgt gatcgggtcg atgttcatct gcgagcctcg cctttaggcg cgccatcctg
      781 gtcggaattg tcgcgctgcg tcgccagatg cttttcgtgc tgatcgtcgc gcagcgaagt
      841 cggtaaggct acgcaagcac gcactttaaa ggttgaagcc gataacgaca gctgccgcac
      901 caacccccag cacgaccaca gcaaccatgg tccactcaaa cgctccaaaa cgtgaccaca
      961 tcgtttcctc cctccctagc ttgtttggcc cggtgcgagg caccgaccgg ccaagcagag
     1021 gcagacgctt acactccgcg tctaattagg gcgatcaccg cgcccacctt ttgattgtta
     1081 aaacatcaaa tgtcaatgga acgctgccaa gagtctcctc tctcgcccga aaatccaggg
     1141 ttgaaatgct aactctgtcc gagcaaccgg atattttgat acatagccca tccaggctcc
     1201 gccacgatgc cagcaaattc tcggttgcgt gcgcggtgtg ctaatttaag ccatgaatta
     1261 tcatgcgtga cgcatcaggg tacagtgaag tctgatgcat tagccatcat gcacggttct
     1321 acgggagggc ggcggatttg ctgaccgcgg cgcaaatgag agcggcaagg gcgctggtcg
     1381 ggatggatca gaaggcgttg gccgaggcct ccggcgtctc gcttccgaca atccagcgga
     1441 tggaggcaag caacggtgtc gttcgagggg tgatcgagag cctgacgaaa gttatggcgg
     1501 cgctggaagc ctcagggatt gaattcatta atgagggagc cgtcagcggc ggcggtggca
     1561 gaggggtccg tctgcgtaac cgaattggct aagggcgccg aggtaatccg ggggctttgt
     1621 tttggcggca atggcaacca gggcgcaaga ctttgtgggt agggcagatg tttgcctgag
     1681 cgcgaccggt ctcagagtat gcaggtgccg aggattgcgc cggatcggcc gatgcggagt
     1741 ctcatgctcc cggcggctac atttgcaagt cgcagagcat gcattccata cgaagggccg
     1801 aatgtcggca aagggtcgtc gatccaactg cactcattcg gcggcacggg gatcgtatca
     1861 agcatgtcca ctgcaaggat gtccgacgcg aggtgctcgc tcgtgtccgc acccacgaca
     1921 ccagctttct cgacgccgtt ctcgacggtg tgtttaccgt gccgggcgac ggctgcatcg
     1981 atttttccgg tgtgctcgcg
//
LOCUS       DATILV010000811         4182 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4538146, whole genome shotgun sequence.
ACCESSION   DATILV010000811 DATILV010000000
VERSION     DATILV010000811.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4182
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4538146"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..309)
                     /locus_tag="VLJ17_19735"
     CDS             complement(<1..309)
                     /locus_tag="VLJ17_19735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018640960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6665 family protein"
                     /protein_id="HSV25249.1"
                     /translation="MALNLLRSGYATLEYEIAQEKASALGRLGRRLEAALAALAACPR
                     TATSDRKIRDSLVEQAGYALWLLVVQREACGVTGTAQVMQDYGVPSEVFARMGPLAMP
                     G"
     gene            547..1806
                     /locus_tag="VLJ17_19740"
     CDS             547..1806
                     /locus_tag="VLJ17_19740"
                     /inference="COORDINATES: protein motif:HMM:NF016228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complex I NDUFA9 subunit family protein"
                     /protein_id="HSV25250.1"
                     /translation="MLEHWLIELIGHVSGLSDAQLKQIEKSLPATKALVDLLNRARPI
                     IEQAQNLYTEAEPLIDQAKREWQTVGPAAQILIDVISHHVNRGRSPAEAAETVRAAFD
                     GSINSVAEDHLTDPGLSCATVFGGTGFVGRRVVRHLRESGTRVRIVSRHPRLGEDDGI
                     EQIAADAHDERSVEAAVAGADGVVNAISLYVEHGRDTFHSVHVETAAKIARTARRAGI
                     RRFVHVSGISADTASPSPYIRSRGEGEAAVQTAFPGAVIVRPAVMFASDDAFLTTILR
                     LLRSLPAYPIFGDGRTMLQPVYVDDVAAAIAQILRQSQKPYPVYELAGPRVYSYEELL
                     RTIARIAGLRPVLIRIPFAFWGALAGVAEMLPRPPLTRNQVELMQIDTTASESLPGFR
                     ALRISPRSLEDELEAILKQNKPRVLLS"
     gene            1803..2531
                     /locus_tag="VLJ17_19745"
     CDS             1803..2531
                     /locus_tag="VLJ17_19745"
                     /inference="COORDINATES: protein motif:HMM:NF021509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygenase MpaB family protein"
                     /protein_id="HSV25251.1"
                     /translation="MTTPIFPPWPLRSGLEAATRALFNLGNQSSGDFLRPAGEVALVS
                     PDSASWHVFKNPLSLFIGGVATLIMELAEPRVRTGVWEHTTFRIDPIRRLRRTGLAAM
                     VTIYGARGMAEAMIARIRGMHDRIAGATPAGKAYGANDPALLNWVQGTAAYGFLQAYH
                     AYVRPLSNLRCDRYYAEGTFAASLYGASAPTSEGALELRFEAMANQLERSDILFEFLA
                     IMRSAPHSAIAAEGGAAIADAGRD"
     gene            2509..2724
                     /locus_tag="VLJ17_19750"
     CDS             2509..2724
                     /locus_tag="VLJ17_19750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25252.1"
                     /translation="MLMQAAIDVTPHWLRTIVGLTDDGLNVWEAGALRQIGAFADRLV
                     LETNPAVQACRRMRLPANYLYVHDNAL"
     gene            complement(2887..3111)
                     /locus_tag="VLJ17_19755"
     CDS             complement(2887..3111)
                     /locus_tag="VLJ17_19755"
                     /inference="COORDINATES: protein motif:HMM:NF014626.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006974 - DNA damage response [Evidence
                     IEA];
                     GO_process: GO:0018142 - protein-DNA covalent
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SOS response-associated peptidase family
                     protein"
                     /protein_id="HSV25253.1"
                     /translation="MIVTDAKALTRPIHDGMPVILDKVDFGFSLSGTGGSELLRSAAD
                     DKLRMWPVSRRVNKTGTGDDDPTIIDEVAA"
     gene            complement(3225..3998)
                     /locus_tag="VLJ17_19760"
     CDS             complement(3225..3998)
                     /locus_tag="VLJ17_19760"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HSV25254.1"
                     /translation="MDTSGRAEAMARWMWDARQRRDPYRNLPAELRPASSVEAYAAQE
                     AYYRLAEPEYGAVAGAKIATTTKVMQQLMGINHPCAGAIFARTIHASPARLRAADFVN
                     LRIECEIALKLRADLPARNAPWSRDAVAPIVADTMPAFELIEDRNANYSATEAYSLIV
                     DNCWNGGVVTGAPRRAKDLIGISGKLTIDGKIIDEGKSEDPYATLAWIANHLAERNRD
                     LKAGMVIITGSIIPTISISRGERAVFAVDGLGEAVMEAA"
BASE COUNT          826 a         1242 c         1250 g          864 t
ORIGIN      
        1 gcccggcatg gccaacggcc ccatgcgggc gaagacctcg ctcggcacgc cgtagtcctg
       61 catcacttgc gcggtgccgg tgacaccgca ggcctcgcgc tgcacgacga ggagccagag
      121 cgcatatccc gcctgttcga cgagactatc gcggattttt cgatcggaag tggccgtccg
      181 cgggcatgcg gcaagtgccg ccagcgcggc ctcaagccgc cgtccaagcc gtccgagcgc
      241 tgacgccttc tcctgtgcga tctcgtattc gagagttgcg tatccggaac gaagtaaatt
      301 caacgccata gggacgcgct ccgaaacgtg gcctgccggt tatccctcat ctattggtcg
      361 gcaggggggt gttcaagaca aaacgccgcg gtgcgcgaag ttatgcgaaa tgggagttgt
      421 gttggagaag tcgctcacga attttgtcat cgaggcagcg gccgacggcg atccaaatct
      481 gcacagcgcc atcacagcgt ggtaagtcgg ggcaggcttt gtgggaggta ccagcgaggt
      541 tagaaaatgt tggaacactg gctcattgag ctcatcggcc acgtttccgg ccttagcgac
      601 gcacaactta aacaaattga gaaatccttg ccagcgacca aggcgctggt cgatcttctc
      661 aatagagcac gaccgatcat cgaacaggcg caaaacctgt acactgaagc cgaaccgctg
      721 atcgatcaag cgaagaggga gtggcagacg gtcggccctg cagcgcaaat tttgatcgat
      781 gtgatttcgc atcatgtcaa ccggggtcgc tccccggcag aagccgctga aacagtgcgt
      841 gccgcgtttg acgggtcaat caacagcgtc gcagaggatc atttgacgga tccgggactg
      901 agctgcgcaa ctgtgtttgg cgggaccggc tttgttggcc gtcgtgtcgt gcgccatttg
      961 cgcgagtccg gcaccagggt gcgcatagtc tcgcggcatc ccaggctggg cgaggacgat
     1021 ggaatcgaac agatcgccgc ggacgcacat gacgaacgct ccgtggaggc agccgttgcc
     1081 ggtgccgacg gtgttgtcaa cgcgatcagt ctctacgttg aacacggacg tgatacgttt
     1141 cattcggtgc acgtggaaac ggccgccaag atcgcaagaa ctgcaaggcg ggcagggatt
     1201 aggcggtttg tgcacgtatc agggatcagc gccgatacgg cctcgccttc gccctatatt
     1261 cgcagccgcg gcgaaggtga agcggccgtg cagaccgcat ttcccggcgc agtcattgtc
     1321 cgcccggcgg taatgtttgc gtcggatgat gcatttctta caacaattct ccggttgctg
     1381 cggtccctgc cagcctatcc gatattcggc gacggcagga cgatgctcca gccggtgtat
     1441 gtggacgacg tagcggcggc gatcgcccaa attttgcggc agagccagaa accgtatcct
     1501 gtctacgaac tagcggggcc gcgcgtctac tcctacgagg agttgttgcg aaccattgcg
     1561 cgtattgcag gattgcggcc agtgttaata cggatcccat ttgccttctg gggtgcattg
     1621 gccggcgttg ctgagatgct gccgcggcca ccactcaccc gcaatcaggt cgaacttatg
     1681 cagatcgaca ccacagcctc cgaaagcctg ccggggtttc gcgcacttag aatttcgccg
     1741 cgatcgctcg aagacgaact cgaagcaata ctcaagcaaa acaaaccaag agttttgtta
     1801 tcgtgactac accgatcttc ccgccttggc cactacggag cggcttggag gctgcgacgc
     1861 gggcactgtt taatctgggc aatcaatctt ccggcgattt cttgcggccc gctggcgagg
     1921 tcgcgcttgt gtcgcccgac tcagcatcgt ggcatgtgtt caagaacccg ctctcgcttt
     1981 tcatcggcgg cgtcgcgact cttataatgg aacttgcgga gccccgtgtg cgtaccggtg
     2041 tgtgggagca cactaccttc cgcatcgatc cgattcgacg actgcggcgg acaggacttg
     2101 ccgccatggt cacgatttac ggcgctcgcg gcatggccga ggctatgatc gcccgcattc
     2161 gcggaatgca cgatagaatc gccggcgcga cgccagcagg caaagcctac ggtgccaatg
     2221 acccggcgct tctaaattgg gttcagggta ccgccgccta cggctttctg caggcttatc
     2281 atgcgtatgt gcgaccgctc tcgaatttgc ggtgcgaccg ttattatgcg gaaggaactt
     2341 tcgctgccag tctttacggc gccagtgcac cgacatcgga aggagccctt gaactgcgat
     2401 ttgaggcgat ggccaatcaa ctggagcgct cggacatttt gttcgagttc ctagcgatca
     2461 tgcgctccgc accccattct gccattgccg ctgagggcgg tgcagccatt gctgatgcag
     2521 gccgcgattg atgtgacgcc tcattggctg cggacgattg tgggcctcac cgacgacggc
     2581 ttaaatgttt gggaggctgg cgcgctgcgg caaattggag cgttcgcgga tcgccttgtt
     2641 cttgaaacca acccagccgt ccaggcctgt cgacgcatgc gacttccggc caattatttg
     2701 tatgtccacg ataacgcatt atgattgaat attctcccct cgattaaaca acgatgtcgc
     2761 ctgttggccc aaaggggaag acccagcctg cgccaaacga gtccggttat tgatgtgcta
     2821 cgggcgccgg tgcggtgctc attctgcgcg tcgcgccatt catgacatgg ccggcggggc
     2881 ggatgctcag gccgcgacct cgtcaatgat cgtcggatcg tcgtcgcccg tgccggtctt
     2941 gttgacgcgc cgcgataccg gccacatgcg caacttgtca tccgcggcgg atcgcagcaa
     3001 ttcagacccg ccagtaccgc tcagcgagaa accgaaatcc accttgtcga gaatcaccgg
     3061 catgccgtcg tgaatcggcc gtgtcagcgc tttggcgtcc gtgacgatga tggttcacga
     3121 atccacaggt ccgagcggtc gtcgacgcgg ctgtgcgcct cgcatgcacg gtcatcagga
     3181 gcgcaagaaa aagaacaagg taaggctaag gaatctctgg catttcaggc agcctccatc
     3241 acggcttcgc ccagcccgtc gactgcgaat acggcgcgct cacccctcga gattgagata
     3301 gttggaatga tgctcccggt gattatgacc attccggctt tcaagtcccg gtttcgttcg
     3361 gcgagatgat tggcaatcca ggcgagcgtt gcgtaaggat cttctgactt gccctcgtcg
     3421 atgatcttgc cgtcgattgt gagcttaccg gagatcccga tcaggtcctt agcccgccga
     3481 ggagcgccag tgacaacacc gccattccag caattgtcga cgatgagcga ataggcttca
     3541 gtcgccgaat aatttgcgtt gcggtcctca attaattcga aggccggcat cgtatccgcc
     3601 acgattggcg cgactgcgtc acgtgaccac ggcgcattac gtgcgggcag atcggcgcga
     3661 agtttgagcg caatttcgca ttcaatgcgc agattgacga aatcggcggc ccgtaagcgc
     3721 gccggtgacg catggatagt gcgcgcaaag atcgccccgg cgcacggatg gttgatgccc
     3781 atcagctgct gcatcacctt cgtggtggta gcgatcttgg cacccgcgac cgcgccatac
     3841 tccggctcgg ccagccgata atatgcctcc tgggccgcgt aggcctcaac gcttgaggcg
     3901 ggtcgcagct cggccggcag gttgcggtac ggatcgcgcc tctgacgtgc gtcccacatc
     3961 cagcgagcca tcgcttccgc acgcccgctt gtgtccattg cggcctcctc tcggactttc
     4021 cccctcaggc aacgcgacaa tgggcgaaat ggactgcccg tagccggtgc ataaatgaca
     4081 cgacgctgtg caggacaccc gcggtcctca agtccacttc agacgttgca cgatggcgcg
     4141 gcccatcacc agatccttgt cgttctcgga caggaagttc ag
//
LOCUS       DATILV010000812         2478 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3008066, whole genome shotgun sequence.
ACCESSION   DATILV010000812 DATILV010000000
VERSION     DATILV010000812.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2478)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2478)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2478
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3008066"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            861..2120
                     /locus_tag="VLJ17_19765"
     CDS             861..2120
                     /locus_tag="VLJ17_19765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008131394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HSV25255.1"
                     /translation="MKSAFHRSILALTAILVVAGVSQANAQQKPLKKYDSGTKEFWTH
                     PPDDWFLGDETEAQKGLAPPSGPPTGASDAELAKLIPKIKLPAGFKIEVYASNVLAAR
                     QMAWGDKGTLFVGSFGLGNVYAIKDNGGKKEVKTILKGLNMPTGLAFKDGALYVIAVD
                     KLIKYENAEANLDNLGSGKVVYDDMPSYAAHGWKYIAVDKDGWFYLPFGPPFNVGIPP
                     TSVSQIRRVDPNTGNAETWALGVRNSVGGDVDPRTGKYWFTENARDWISDDLPSDKLN
                     MISKIGEHFGYPYCHQGDLPDDKFAMGHKCSEFTPPVLNLGAHVAPLGMKFYTGDQFP
                     AEYKNNIFIAEHGSWNRHKYQGARIMRVTADPDGKNAKEEVFASGWLEGEQGYLGRPA
                     DIVLATDGSILVADDWAGAIYRISYSK"
     gene            2253..2478
                     /locus_tag="VLJ17_19770"
                     /pseudo
     CDS             2253..2478
                     /locus_tag="VLJ17_19770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007604114.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c4"
BASE COUNT          527 a          766 c          725 g          460 t
ORIGIN      
        1 cgaagttgca tatgcttctc gtgtcggcgc tggccgctag atcccgaggc gcgccacagc
       61 cgctccaagt ccccacagca aggctccaat caagcccgaa acggacccag atcgtattgg
      121 cccgcggaaa tcgctccgcc gggaacggaa tttttgaacg cggagactgg agcctgcaat
      181 aggcccatga gaccgctagt tttttcggag accgaaaaag ccgtaaaatg ctgtccaaat
      241 tcccggcaga aacggcctct ttccgagcaa ggacagattt gccggtttgg ggcgactgaa
      301 tggtggtgtg cgcagtcata tgcgaaccgg tctccacctg cacggcgagc agcctcaaca
      361 acctcgccag cacgcccagg gcgaccccgc gggggcgcgg ccgctctatg aacgtgcgct
      421 ggcttggtta ctgctgcaac cccgggtaac ggcacgttct ctctgtacta cgggacgggc
      481 gcggccgctc gcggcgtcga cgacgtacaa cgtcggcccg tttgccacgc ccacccgcca
      541 ccgctattcg aataggacgg ctccggcaag cagaaaaggg cgagggatct caaagccgag
      601 tttccgatgc tccaagtctc accaccgggc gaatcacgcc ttcagccgcg ccagtgacag
      661 cgggtgcggt cgagttcgag gattgagcga gttatttttt ccttttttcc cgtctataaa
      721 aaaggggcgt tttccggctc gattgcaatc gcttgtgggt agacgaaaat tccgattgca
      781 cagggggcac gcgcggacta cagaccgaaa cgttcgtctg tcgaaacctt caaaataaat
      841 gctgcatagg gagtgacgcg ttgaaatcgg ctttccatcg atctattctt gcgctcacag
      901 cgatcctcgt tgtcgcgggg gtcagtcagg ccaacgccca gcagaaaccg ctgaagaaat
      961 acgattccgg caccaaggaa ttctggaccc atccgccgga cgactggttc ctcggcgatg
     1021 agaccgaagc ccagaagggc ctcgcgccgc catccggtcc gccgaccggc gcgtcggacg
     1081 ccgaactcgc gaaattgatc ccgaagatca agttgccggc gggcttcaag atcgaggtct
     1141 atgcctcaaa cgtgctggcg gcgcggcaga tggcctgggg cgacaagggc acgctgttcg
     1201 tcggctcctt cggcctcggc aacgtctatg cgatcaagga caatggcggc aagaaggagg
     1261 tcaagaccat cctcaagggc ctcaacatgc ccacggggct ggcgttcaag gacggcgcgc
     1321 tctacgtcat cgcggtcgac aagctgatca aatacgagaa cgccgaagcc aatctcgaca
     1381 atctcggcag cggcaaagtg gtgtatgacg acatgccgtc ctacgccgcg catggctgga
     1441 aatatatcgc ggtcgacaag gatggctggt tctatctgcc attcggacct cccttcaacg
     1501 tcggcattcc gccgaccagc gtctcgcaga tccgccgcgt cgatccgaat accggcaatg
     1561 ccgagacctg ggcgctcggc gtccgcaaca gcgtcggcgg cgatgtcgat ccgcgcaccg
     1621 gaaagtactg gttcacggaa aacgcccgcg actggatcag cgacgatctc ccgagcgaca
     1681 agctcaacat gatctcgaaa atcggtgagc atttcggcta tccctattgt caccagggcg
     1741 atttgccgga cgacaaattc gcgatgggcc acaaatgttc ggagttcacg ccacccgtgc
     1801 tcaatctcgg ggcgcatgtg gcaccgctcg gcatgaagtt ctacaccggc gatcaattcc
     1861 ccgccgagta caagaacaac atcttcatcg ccgaacacgg ctcctggaac cggcataagt
     1921 accagggcgc gcggatcatg cgcgtgaccg cggatccgga cggcaagaat gctaaggagg
     1981 aagtattcgc ctccggctgg ctcgagggtg aacagggcta tctcggccgc cccgccgata
     2041 tcgttttggc gacggatggt tcgatcctcg tcgccgacga ctgggccggt gcgatctatc
     2101 gtattagcta cagcaagtag taagagcgac tcaggaggct gcggctgtgc ccaggccgcc
     2161 acagcctcct gcctttctat ctcccacact gtcgttccgg atcgcgcgcc agcgctgaca
     2221 cggaatccat ggccacgaca aagtacagat cgatgcgcgg gtattttttg gggttcgccg
     2281 taggtggtct tgcgctcgct tcgtcattcc ttgcagcgcc aaccgtcgac gccgccgccg
     2341 gcaaggaaag gccgagatct gcgccggctg tcacggcgac aacggcattt cgcaaatgga
     2401 gaacattccc tcgctcgcgg gacagctcga ccaatacatc cagtggcaat tggtgtattt
     2461 ccgcgccggc tcccgcaa
//
LOCUS       DATILV010000813         4693 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2754871, whole genome shotgun sequence.
ACCESSION   DATILV010000813 DATILV010000000
VERSION     DATILV010000813.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4693
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2754871"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1311)
                     /locus_tag="VLJ17_19775"
     CDS             complement(<1..1311)
                     /locus_tag="VLJ17_19775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HSV25256.1"
                     /translation="MVFGQPVLTRLADHDALYRQFRWQVPAAYNIGAEVCDRWADLDP
                     RRTALIDARDDGHYDEVSYGALRDTSNRLANALRAFGVVRGDRVAILLPQGPDVAVSH
                     IAIYKLAAIALPLAMLFGVDAISYRLQNSGARALITNAQGLSKLAGMRDSLPDLVLSV
                     DGAHDKTLGFHETLARASCAFTPEVTMADDPALMVYTSGTTGQPKGALHPHRVLIGHQ
                     PGIEMPHEFFPQPGDRMWTPADWAWAGGLLNCLLPGLLYGVPVVARRFERFDPEEAFA
                     VIARNAVRNTFIPPTALRMMRSAPDPRGRYEFRLRTVGSGGEALGIETYEWGKSALGL
                     VINEFYGQTECNLVVGSCAAIGLTRPGAIGKPIPGHVVGIIRPDGMSCRPGEIGQIAV
                     KRPDPVMFLSYWGNPDATREKFLGDWMTTGDQGVVDDDGYISFVG"
     gene            1437..2588
                     /locus_tag="VLJ17_19780"
     CDS             1437..2588
                     /locus_tag="VLJ17_19780"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV25257.1"
                     /translation="MGGKLGRTGAAFIISTLVSGVTIADERPLMLARDGFFYVNGKPT
                     TFNDREYIAGQMYVEVRIPAKKTNPYPIIMVHGGTMSGTNFTGTPDGREGWAQYFVRQ
                     GYAVYVVDQPGRGRSGYLSAAYGPDRNVERGNSGSRFVAQEKFNLWPQAHLHTQWPGS
                     GEPDDDATMQLASGQLPAIASFTRQQFLNRDALVALLEKIGPSILMVHSQAGAFGWPV
                     ADVHPDLVKAILAIEPNGPPFYSVEFVGAPTWFKQGASGLDYGITSVPLTYAPPLKSA
                     ADLDIVVQEKPDAPDLVRCYAQKEPARQLPNLQKMPILVLTAEASYHAPYDHCTVKYL
                     QQAGVKPTHIRLAGLGIHGNSHVMMLEKNNKEIAAVIAKWLDKTLNGKH"
     gene            complement(2572..2862)
                     /locus_tag="VLJ17_19785"
     CDS             complement(2572..2862)
                     /locus_tag="VLJ17_19785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25258.1"
                     /translation="MMLAHKIALDPTNNQRTYFARACGAVLLQLRLSRMGAAIQGGEP
                     SEAALRSASGLEIDTPSTPAAALMPTILAILQRIAQVRRDYKITALALSAFR"
     gene            complement(2871..3036)
                     /locus_tag="VLJ17_19790"
                     /pseudo
     CDS             complement(2871..3036)
                     /locus_tag="VLJ17_19790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006926032.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS607 family transposase"
     gene            complement(3320..4201)
                     /gene="mutM"
                     /locus_tag="VLJ17_19795"
     CDS             complement(3320..4201)
                     /gene="mutM"
                     /locus_tag="VLJ17_19795"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0008534 - oxidized purine nucleobase
                     lesion DNA N-glycosylase activity [Evidence IEA];
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HSV25259.1"
                     /translation="MPELPEVETVRRGLAPVMEGARIVRVEVRRPDLRWPLPRDFVQR
                     LEGETVTGIGRRAKYLTADLASGDVLLMHLGMSGSFRVGHDGEGGIPGEFHHPRTAAP
                     AHDHVVFHMSSGATVTFNDPRRFGLMLIVPRRELAGHPLIREVGPEPLGNAFDANVLA
                     AACAGKKTTLKAALLDQTVVAGLGNIYACEALHRAQLSPKRRAFTIATRTGAPKACAI
                     ALVDAIKTVLNDAIKAGGSSLRDHRRTDGELGYFQHHFRVYDREGELCVTPGCRGKVK
                     RIVQNGRSTFFCPVCQK"
     gene            4287..>4693
                     /locus_tag="VLJ17_19800"
     CDS             4287..>4693
                     /locus_tag="VLJ17_19800"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009796630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSV25260.1"
                     /translation="MPATNGAPDPHRDTHFGFRAVGLDDKQAMVDEVFDRVAPHYDLM
                     NDLMSGGLHRIWKDILVTAVNPPRNQRPFAVLDVAGGTGDVAFRIARAGGAGTRVTVC
                     DMSEEMLDVGRERAALRGLDAKVTFTAGNAESLP"
BASE COUNT          908 a         1438 c         1494 g          853 t
ORIGIN      
        1 gcccacaaac gaaatgtagc cgtcatcatc gacgacgccc tggtcgccgg tcgtcatcca
       61 gtcgccgagg aatttctcgc gcgtcgcatc cggattgccc cagtaggaca gaaacatcac
      121 cgggtcgggg cgcttcacgg cgatctggcc gatttcgccg ggccggcatg acattccgtc
      181 cggcctgatt atcccgacaa catgacctgg aatcggttta ccgatggcgc cgggccgggt
      241 gaggccgatc gccgcgcagg agccgaccac aagattgcat tcagtctggc cgtaaaattc
      301 gttgatgacg agtccgagcg ccgacttgcc ccattcatag gtctcgatgc caagcgcctc
      361 gccgccggac ccgaccgtgc gcaagcggaa ctcgtagcgg ccgcgcggat cgggtgccga
      421 acgcatcatg cgcagcgcgg tcggcggaat gaacgtattg cggaccgcgt ttcgcgctat
      481 gacggcgaag gcctcctcgg gatcgaagcg ctcgaagcgc cgcgccacca cgggcacgcc
      541 atagagcagc cccggcagca ggcagttgag cagtccgccg gcccacgccc agtcggctgg
      601 cgtccacata cggtcgccag gctggggaaa gaactcatgc ggcatctcga tgcccggctg
      661 atgaccgatc agcacgcggt gggggtggag ggcgcccttg ggctgtccgg tggtgcctga
      721 cgtgtacacc atcagggccg gatcgtcggc cattgtgact tcgggagtga atgcgcacga
      781 agcacgcgcg agcgtctcgt ggaacccaag ggtcttgtcg tgtgcgccgt ccaccgagag
      841 cacgaggtcc ggcagcgaat cgcgcattcc ggcgagcttg ctgaggcctt gggcattggt
      901 gatcaacgcc ctggcaccgg aattttgcag ccgatatgaa atggcatcga caccgaacaa
      961 cattgccaac ggcagcgcaa tggccgccag cttgtagatt gcgatgtggc tcactgccac
     1021 gtccggacct tgcgggagca ggatcgccac ccgatcgccg cgtacgaccc cgaaagcgcg
     1081 aagcgcattg gcgagccggt tcgaggtgtc gcgcaaagcg ccgtagctga cctcgtcgta
     1141 gtgcccatcg tcacgagcat cgattagcgc ggttcggcgg gggtcgagat cggcccagcg
     1201 gtcgcagacc tccgcgccga tgttgtaagc cgccggcacc tgccagcgga attgccggta
     1261 cagcgcgtcg tggtcggcaa gccgtgtcag aacgggttgg ccgaaaacca agttttcact
     1321 ccgggcaagc gtgaatgccg aacgggtttc ctgagctata atggaggcgg aacgataaca
     1381 aaactctgtg ggggagaaat cgggatatgt gtgaacatcg gcgaacgggt gtagcgatgg
     1441 gcggcaaatt ggggcgcacc ggcgccgcgt tcattatttc gacgctggta tcgggcgtca
     1501 ccatcgcgga cgaacggccg ctcatgcttg cccgtgatgg cttcttctat gtcaacggca
     1561 agccgaccac cttcaacgat cgcgagtaca ttgccggcca aatgtatgtt gaggttcgca
     1621 ttccggccaa gaaaaccaac ccctatccga tcatcatggt gcacggcggc accatgtcgg
     1681 gcaccaattt caccggtact ccggacggcc gcgagggctg ggcgcaatat ttcgttcgcc
     1741 aaggctatgc ggtctatgtg gtcgatcaac ccgggcgcgg acgctccggc tatctctccg
     1801 ccgcatatgg gccggaccgt aacgtggagc gcggcaattc cggctcgcgc ttcgtcgccc
     1861 aggagaagtt caatttgtgg ccgcaggcgc atctgcacac ccagtggccc ggcagcggcg
     1921 agcccgacga cgatgccact atgcagctgg cctctggcca gctgcccgcg atcgcgagct
     1981 tcacccggca gcagttcctt aaccgggatg ccctggtggc ccttctggag aagatcggcc
     2041 cgtcgatcct catggtgcac agccaggccg gcgccttcgg ctggccggtt gcagatgtgc
     2101 acccagactt ggtgaaggcg atccttgcta tcgagccgaa tgggccaccg ttctattcag
     2161 tggagttcgt cggcgcgcct acttggttca agcagggcgc gtctgggctc gactacggca
     2221 tcacctcggt tccactcacc tatgcgccgc cgctaaagag cgcggccgat cttgacatcg
     2281 tcgtgcagga aaagccggac gcgcctgatc tcgtgcgctg ctatgcacaa aaggagccgg
     2341 cgcggcagct cccaaatctc cagaagatgc cgatcctggt gctgaccgcc gaagcgtcct
     2401 accacgcgcc ctatgatcac tgcaccgtga agtatctgca gcaggccggc gtgaagccga
     2461 cccacatccg cctcgccggc cttggcattc acggcaacag ccacgtgatg atgctggaga
     2521 agaacaacaa ggagattgcg gcggtcatcg cgaagtggct cgataagacg cttaacggaa
     2581 agcactgagg gctaaagcag taattttgta atctctgcga acctgtgcaa ttctctgcaa
     2641 tatggcgagg attgttggca tcagcgcggc agcgggcgtg ctgggcgtgt cgatttctag
     2701 gccgcttgcg ctgcgcaatg cggcttctga aggttcgcca ccctgtattg cggcccccat
     2761 tcggctaagg cgcaattgta ggagaacggc gccgcaggcc cgagcaaaat aggtgcgctg
     2821 gttattggtt ggatcgagcg cgattttatg agccagcatc attgcggcga tcagcgcttg
     2881 acaccatcca gaagcttttg gttcttgtgg gatcgtgagc cgtacaggca ggcgctaaag
     2941 acggtgataa tcttaaaaaa acgtcctttg ccaaatcctc ctcaaaggtc ctcgccttgg
     3001 tttcaggata acaaccttct tcgcttcgca aatcgcggga gacgcgttca gcgccaatgc
     3061 gcggttagcg aaactggatt tgtcgcaacg ggtgtttcct tgcgaggatt gcggtttcgt
     3121 ggcggatcgg gactggatgt ggcgaaaaat catgaacgtc ttgccgcaag ctctgcggta
     3181 tcagcctgcg gagaggaacg ctctggcgcg ctcgcaagag ccgcgtgaaa cggaacctcg
     3241 aagaagcagg aaccgaacgg catcggcgag ctttacgcga gcttagcggc gatccttcgt
     3301 caacccggaa agccgataat cacttctgac acaccgggca aaaaaacgtc gaccgcccgt
     3361 tctgcacgat ccgcttcacc ttgccgcggc atcccggtgt aacgcacagc tcgccttcac
     3421 ggtcatagac gcggaaatgg tgctggaagt agccaagctc gccgtcggtg cggcgatgat
     3481 cgcggagcga cgagccgcca gccttgatgg cgtcgttaag caccgtcttg atggcatcga
     3541 ccagcgcaat cgcgcaggcc tttggggcgc cggttcgtgt cgcaatggta aaggcacggc
     3601 gttttggcga cagttgtgcc cggtgcaggg cctcgcaggc atagatattg ccgaggccgg
     3661 ccaccacggt ctgatcaagg agggctgcct tgagggtggt ttttttgcca gcacaggcag
     3721 cggccagcac gttggcatcg aacgcattgc cgagcggctc cgggcccacc tcgcgtatca
     3781 gcggatggcc cgccaactcg cgccgcggca cgatcagcat cagaccgaac cggcgcgggt
     3841 cgttgaacgt cacggtggcg ccgctcgaca tgtggaacac cacgtgatca tgggccggcg
     3901 ccgcggtgcg cggatgatga aattcgcccg ggatcccccc ctcgccgtcg tggcctacgc
     3961 ggaacgagcc cgacatgccg agatgcatca gcagcacgtc gccggaggcg aggtccgccg
     4021 tcaaatattt ggcgcggcgg ccgatcccgg tgacggtctc gccttcgagc cgctgcacga
     4081 agtcgcgcgg tagcggccag cgtaaatccg ggcgccgcac ctcgacccgg acgatgcggg
     4141 cgccctccat cacgggggca agccctcgcc gcacggtttc aacctcggga agttccggca
     4201 cgtttcctgt tcaccttgga ccggggattt gatagcgcct caatgcctgt cgggctatgg
     4261 tcccggcgca caaaggattc accaccatgc cggcaaccaa cggcgcgcca gaccctcacc
     4321 gcgacaccca ttttggcttc cgcgccgtcg gcctcgacga caagcaggcg atggtcgacg
     4381 aagtctttga cagggtcgcg ccgcattatg atctgatgaa tgacctgatg tcgggcggac
     4441 tgcaccggat atggaaggac atcctggtga cggccgtgaa cccgccccga aaccagcgac
     4501 cgttcgccgt gttggacgtc gccggtggca ccggggacgt ggcattccgg atcgcaaggg
     4561 ctggcggcgc cggcacccgg gtgacggtgt gtgatatgag cgaggaaatg cttgacgttg
     4621 gccgcgagcg ggcagcgctt cgcgggctcg atgccaaggt gacgtttacg gccggcaatg
     4681 ccgaaagcct gcc
//
LOCUS       DATILV010000814         1810 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2240499, whole genome shotgun sequence.
ACCESSION   DATILV010000814 DATILV010000000
VERSION     DATILV010000814.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1810)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1810)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1810
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2240499"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..404
                     /locus_tag="VLJ17_19805"
     CDS             <1..404
                     /locus_tag="VLJ17_19805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018070991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HSV25261.1"
                     /translation="LGTLRHGRPDSDCLKSAAQCHPISYPKPDGKLTFDRLSSVFLSN
                     TNHEEDQPVHLLVADATLQKASEHDVYAGPSGRYCPAGVYEWVEQGGVPIYVINAQNC
                     IHCKTCDIKDPNRNISWVAPEGGGGPNYQNM"
     gene            638..>1810
                     /locus_tag="VLJ17_19810"
     CDS             638..>1810
                     /locus_tag="VLJ17_19810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25262.1"
                     /translation="MKILPHLSVTVIAAAALWAVPGAMAAQAPNSHDVSRFTPAGSYL
                     AARQADLDRDPDAAATYFRAALKSDQRNPELLELTFYSVLAFGEIDEAVRLAERLVQL
                     DRNNRNVHLVLGVRALKQKQWKDARAHFSQAMHGPVNDLIGTLLSAWSAFGANDAKGA
                     VETIDKLNGPEWYGIFKDMHAGLIFDLANNKKEAGKRFEHAFKLDATALRVMQSHAGF
                     LSRNGSRDEAVKILEEYDRQLPRYPLTVEALALLKKDMPLPRMVETAQAGAAEALYGL
                     GAALGRREDELSLRNRGLAYLQLALYLEPNHALAQISLADLYEAMKKPELAIKTYERV
                     PASSSLKRNAEIQLAIDLDVLERTEEAKKHLDKLIANKPDDMEAIIALANIQRERKQ"
BASE COUNT          383 a          520 c          544 g          363 t
ORIGIN      
        1 tacttggcac tctgcgtcac ggcaggccgg atagcgattg tctgaagtcc gcggcacagt
       61 gccacccgat ttcctatccc aagcccgacg ggaagcttac cttcgatcgg ctctcatcgg
      121 tatttctatc gaatacgaat catgaggaag atcaaccggt tcacctgctg gtagcggatg
      181 cgaccctgca gaaggcgtcc gagcacgatg tctatgccgg accgtccggc cgttattgcc
      241 cggccggcgt ctatgaatgg gtggagcagg gcggggtgcc gatttatgtc atcaatgctc
      301 agaattgcat ccactgcaaa acctgcgaca tcaaggatcc aaatcgaaac atcagctggg
      361 tggcgccgga gggcggcggc ggccccaact atcagaacat gtgatgatgt gatattgtgc
      421 cggttggtcg cgatgtcgcc atcaaccaga ccggatgcgg aaatgaagcg atggcgcgcc
      481 aacgacgtga tgacgtacaa atgacgtgat gacgcgcaaa taaccttgcg gcgcgtttgc
      541 aggtgttcat tcttgcccgt cgagtgtagg ttgcccggcg gccggggggc atcaagatcg
      601 ccgatatgac tattatccca ttggagcgca gcgacccgtg aaaatattac cgcacttatc
      661 cgttaccgtg attgcagctg cggccctttg ggcggttccc ggggctatgg cggcgcaggc
      721 cccgaactcg cacgacgtga gccggttcac acccgctggg agctaccttg cggcacgcca
      781 ggctgatctg gatcgcgacc cagatgcggc ggcgacttac tttcgggcgg cgctcaagtc
      841 tgaccaacgc aatccggaat tgctggagct gacgttctat tcggttctgg cctttgggga
      901 gatcgacgaa gcggtgcggc tggctgaacg gctggtgcag cttgatcgga ataatcgaaa
      961 tgtgcacctt gttctcggtg tgcgtgcgct caagcagaaa caatggaagg acgcccgcgc
     1021 acatttcagc caagccatgc atggccccgt caacgatctc attggcacgc tcttgtcggc
     1081 ctggagtgcg ttcggtgcca acgatgccaa gggtgcggtt gagaccatcg acaagctcaa
     1141 tgggccggaa tggtacggca tcttcaagga catgcatgcc ggcttgatct tcgatcttgc
     1201 caacaacaaa aaggaagccg gtaagcggtt cgagcatgcc ttcaagctcg atgctacggc
     1261 gctgcgggtc atgcagtccc acgccggctt tctgtcacgt aacggatcgc gcgacgaggc
     1321 agtgaagatc cttgaggaat acgacaggca gttgccgcgc tatccgctca ccgtcgaggc
     1381 gttggcgctc ctcaaaaagg acatgccgct cccccgcatg gtcgagacgg cgcaagccgg
     1441 tgctgccgaa gcgctctatg gactcggtgc ggcgctcggt cgacgcgagg acgaactgag
     1501 tcttcgcaat cgcgggctcg cttatctcca gcttgcgctc tatcttgagc ccaaccatgc
     1561 gctggcgcag atttcgcttg ctgatcttta cgaggcgatg aagaagcccg agctcgcgat
     1621 caagacctat gagcgggtgc cggcctcctc atccctcaag cgcaatgcag agatccagct
     1681 cgccattgat ctcgatgtgc tggagcgcac tgaggaagcc aagaagcatc tcgacaagct
     1741 gattgccaac aagccggacg acatggaggc catcattgcg ctcgccaata tccagcgcga
     1801 gcgcaagcaa
//
LOCUS       DATILV010000815         2664 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1477969, whole genome shotgun sequence.
ACCESSION   DATILV010000815 DATILV010000000
VERSION     DATILV010000815.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2664
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1477969"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..537)
                     /locus_tag="VLJ17_19815"
     CDS             complement(139..537)
                     /locus_tag="VLJ17_19815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25263.1"
                     /translation="MNKGTFTLCAAAALGLAAALLMPTQVTAIGSGMHSFHSSPIKFF
                     RPFRHHHHHHGFKNWNNWNNGLYAGYGYPGSYTIPSYSTDPVGDVTGSVSVDPIIPPP
                     PGLNCQRSRDVVTVPSAIDGSARQVTITRC"
     gene            complement(589..951)
                     /locus_tag="VLJ17_19820"
     CDS             complement(589..951)
                     /locus_tag="VLJ17_19820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25264.1"
                     /translation="MFQKAAVLLKATIPTARFHAQRLTRPTISNAGGDRRTVGALVAI
                     RNADFLLAAASHRSSRCDLAVERDKIEQGGCHDQGLTLREHERAKIGAPRVKIHRPAT
                     FQPARNTSKTRRRLAFLH"
     gene            1224..2243
                     /locus_tag="VLJ17_19825"
     CDS             1224..2243
                     /locus_tag="VLJ17_19825"
                     /inference="COORDINATES: protein motif:HMM:NF021603.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2336 domain-containing protein"
                     /protein_id="HSV25265.1"
                     /translation="MLRHLTDLFLVGSDQYSEEEIDLIDDVFVRLVATIEQSSRALLS
                     IRIGPVALAPPKILRVLACDDAIDVASPVLTQAARLDTETLIECARTKNQEHLLAISR
                     RKTLPESLTEVLVERGDQQVVLSTAKNPGAMFSGKGFDNLVKRSHGDDALTFCVGMRS
                     DLPPQLLDQLLAAASEKVSKKLVAEREYAKADIQRVVGEVAGRIQTGAATQPLSYAAA
                     QVLVESLQQAGLLTSAKLQEFASAGRFEEMVAALSLLSNVPTAVIEQNMRDTRAESLL
                     VLAKAIDLSWETTRSIMTLVAKRYRRSATGIDQAMSSFHRLRQSTAQQILDFHRLPDR
                     PSRGH"
     gene            complement(2258..>2664)
                     /locus_tag="VLJ17_19830"
     CDS             complement(2258..>2664)
                     /locus_tag="VLJ17_19830"
                     /inference="COORDINATES: protein motif:HMM:NF018168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="flagellar basal body rod C-terminal
                     domain-containing protein"
                     /protein_id="HSV25266.1"
                     /translation="DVMSIASTIAVSGLNVATLRLDVAASNIANALSDGPLPGAGNVE
                     NFPAAYTPLRVNQTDVVGTSATVSAVSPATVPAHDPGAPFADSNGMVASPNVDLANEL
                     VQLLIARYTFAANAQVIRADAQMSAALLNVFA"
BASE COUNT          557 a          785 c          765 g          557 t
ORIGIN      
        1 agcccggcca tgacgagtca ggaagtaggt atcaatcaca ggcaatgggg gcaagctgcg
       61 cccttaccgc ggcggcgcag ccctatcgcg ggcgcaatac gatttcctcg acgactcagt
      121 ttgagccgcc gaccatgttt agcatcgcgt gatcgtaacc tgccgcgcac tgccatcaat
      181 tgccgacggc accgtcacca cgtcacggct tcgctggcag ttcaatccag gtggcggcgg
      241 aattattggg tcgacactca cggatccggt tacgtcaccc accgggtcgg tcgagtagct
      301 gggtatggtg taggagcccg gatagccata tccggcgtac agtccgttgt tccagttatt
      361 ccagtttttg aaaccgtgat gatggtgatg gtgccgaaat ggtctgaaaa attttattgg
      421 actgctgtga aacgaatgca ttcccgatcc aatcgccgtc acttgagttg gcatcagcaa
      481 tgcggccgca aggcccaacg cggccgcggc acagagggta aaggtcccct tgttcatgat
      541 catgaccctg tccacgcgcc actcgcaaag gccaccacaa ttttgcaatc aatgcaagaa
      601 agctagtcga cgtcgtgttt tgctggtatt tcgagcaggc tgaaaggtgg ccggacgatg
      661 gattttcact cttggcgcgc cgatttttgc gcgctcatgt tcgcgcaacg taagaccttg
      721 atcgtggcag ccgccctgct cgatcttgtc gcgctcgact gccagatcgc accggctgct
      781 ccgatgcgat gcagcggcga gcaaaaaatc tgcattgcga attgcaacaa gagccccgac
      841 cgttcgtcga tccccacctg cgttactaat tgtggggcgc gtcagtcgct gtgcatgaaa
      901 acgggctgtt gggatagtgg ctttcaaaag tactgcggcc ttctgaaaca ataacgggac
      961 ggctcttccc ccgcggacca ccatgaattt gaacgggaaa taggcacatc cgggcccaat
     1021 ggaccctgcc ctgaaacgtc ccgcggcctt tacgaattgc taaacccaca tcgcgtacaa
     1081 tctaaatgga cgtttaccac cggcagaatt gccaatccgt ggccaaccag aacggttctc
     1141 caagccctat gggcgctccg ctcgaactga tacacgagct cgatagctcc atttcgcata
     1201 gctcggacga gcggcgctcg gcgatgctac gccatctgac cgatctgttc ttggtcggct
     1261 ccgatcagta ttccgaggaa gagatcgatc tgatcgacga cgtctttgtg cggctggtag
     1321 caaccatcga gcaatcttca cgcgctctgc tttcgatccg catcggacct gtggcgctgg
     1381 cgcccccaaa gatcttgcgc gtactcgcct gcgatgatgc gatcgacgtc gcctccccgg
     1441 ttctcaccca ggctgcacgg ctcgacactg aaactttgat cgaatgtgcg cgaacgaaga
     1501 atcaagagca tctgctcgct atttcgcggc gcaagacatt gccggagtcg cttactgagg
     1561 tgctggtgga gcgcggcgat cagcaggtcg ttttgagtac ggcgaagaac cctggcgcga
     1621 tgttctccgg caaggggttt gacaaccttg tcaaacgctc gcatggcgac gatgcgctca
     1681 cgttttgcgt cggcatgcgg tcggatctgc cgccgcaact gcttgaccag cttcttgcag
     1741 cggcgtcgga aaaggtatcc aagaaacttg tcgccgaacg cgaatatgcc aaggccgata
     1801 tccagcgcgt cgtcggcgag gttgctggcc ggatacaaac cggggccgcc acgcaaccgc
     1861 tgagctacgc ggcggcgcaa gtgcttgtcg aatcgctcca gcaggccggc ctgcttacgt
     1921 ccgcaaaact ccaggagttc gcctcagcgg gccgtttcga agaaatggtt gctgcgctct
     1981 cgctattgtc caacgtgccg acggcggtaa tcgaacaaaa catgcgtgac acccgcgcgg
     2041 aatcgctgct ggtactggcc aaagcgatcg acctctcgtg ggaaaccacg cgcagcatca
     2101 tgacgcttgt ggccaaacga taccggcgtt ctgcaacggg tatcgatcag gcgatgtcat
     2161 cgtttcatcg tctgcggcaa tcgaccgcgc agcagatcct cgacttccat cgcttgcccg
     2221 accgcccctc gcgcgggcat taggaacgac agcgaaatca agcaaagacg ttgaggagtg
     2281 cggcgctcat ctgtgcgtcg gcgcggataa cctgcgcatt ggcggcaaag gtatatctgg
     2341 caatgagtaa ttgcacgagt tcattggcta gatcgacatt cgggcttgcc accatgccgt
     2401 tactatcggc aaaaggcgct cccgggtcat gcgccggaac ggttgccggc gagacagcgc
     2461 tcacggtcgc gctcgttccg acgacgtcgg tctggttgac gcgcaagggc gtataggcgg
     2521 ccggaaaatt ttcgacattg ccagcgcctg ggagcggccc gtcggacagt gcatttgcga
     2581 tattgcttgc cgccacatcg agacgcaatg ttgcgacgtt cagcccggag acggctatcg
     2641 tgcttgcaat actcatcacg tccg
//
LOCUS       DATILV010000816         8923 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_5050384, whole genome shotgun sequence.
ACCESSION   DATILV010000816 DATILV010000000
VERSION     DATILV010000816.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8923)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8923)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8923
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5050384"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(400..1596)
                     /locus_tag="VLJ17_19835"
     CDS             complement(400..1596)
                     /locus_tag="VLJ17_19835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25267.1"
                     /translation="MRSAGKEPSERDDRAEGQSAGPDENQLEMFEAAPIERAETRLPR
                     MINLGDGDRREGGGRNVTVSDASTLRFLDVNGTDPEELRRLEESIRWLMNEGSVRQRL
                     PRAATLPPVRGLPPVEAHEGGDSLVLNPDSLFPPRVPHRRESALGLGGLGGLGKFLLA
                     SAIAAPAAYFIASWVQRADTAVPSDMVAVTGSFEDRLAAMAPAPAPAPSRSRSLRPQP
                     ADEISTAPQAEPMATRAIPPMDPRPAAVAEPNVVQAVAPLDRSPGVAAVPPDPALRTA
                     VAVSSPPTTSPGAATPKAAVLSAREIAAFVERGRILFDSGDLAAARLFFRRAANAGDA
                     SAALAMGATYDPDVLAKRFIRGIGADASEARMWYEKARELGSPESTPRSIEMLAQQQQ
                     QQQQQR"
     gene            complement(1877..2905)
                     /locus_tag="VLJ17_19840"
     CDS             complement(1877..2905)
                     /locus_tag="VLJ17_19840"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HSV25268.1"
                     /translation="MIESNPKPPGVRKLRVAVVGIGWWSDVLADAVQRSATMEIAACY
                     TRSDDKRRAFAAKYACRAAASYEEILADREIEAIVNTTPNSAHLATTRMAAEAGKHVF
                     LDKPIANTVAEGCEIARVCAAAGVVLALGYQRRRENHFRWVKTEIDAGRFGRLVQAEC
                     NISRDRLGKIDLSSWRYQASGMPGGVMLQIGIHYVDVLEMLIGPVRRVSGASAQLVLP
                     GDNPDVASLILEHECGAISNLTASYASASEYYMMNLYGKEASAYYDLFGGLRHLRRGE
                     AAPRAVAVAANDTIREELDEFAACIRDGGRPETDGWWASRNLAVVLAGIQSAREGRAV
                     DVAPLAAG"
     gene            complement(3107..3550)
                     /locus_tag="VLJ17_19845"
     CDS             complement(3107..3550)
                     /locus_tag="VLJ17_19845"
                     /inference="COORDINATES: protein motif:HMM:NF015862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HSV25269.1"
                     /translation="MYVAAAKRLTHQGAKQMAAVAISHAQETGIAIAVAIADAGGHLV
                     VLERMDGGRFHTVHSATTKAVCAASSRRTTSAQGSQAQPLDVAHAIGLALAAGPERWT
                     ALEGGLPIIVDGECIGGIGVSGGDWETDVCIAREAVEAIGAKWSV"
     gene            complement(3941..4486)
                     /locus_tag="VLJ17_19850"
     CDS             complement(3941..4486)
                     /locus_tag="VLJ17_19850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25270.1"
                     /translation="MGPSLAELLHDWHDFYLLVGTASATLVGLMFVAASIGSSIFDED
                     HRAGLTAFITPTVVHFAAVLFTCLLINIPTQSWRTLGGLIGAGGLAGSIYCGSLVVSM
                     IIRQRFNVDLSDRLFYALLPLLGYLLALIAAALSFMQATASANLIAAAVLTLLFAAVR
                     NAWDMMVWIVIKTPSGRAPSS"
     gene            complement(4916..6010)
                     /locus_tag="VLJ17_19855"
     CDS             complement(4916..6010)
                     /locus_tag="VLJ17_19855"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HSV25271.1"
                     /translation="MGLPQLATTAAASSTRWAIPAAIGVVAVLAMAGGSYFIVPQTEV
                     AFVKRFGKVIDPQDGPLQPGLHLKMPFIDAPDLIRITTDTFELPEKKAFTKDTQEITL
                     RVGVTYRVPTTATYHLLYEIGKAGNVDIHSNIILLSNEVVREVLSKHSITEIAGEQRE
                     MVVTEIKGKLSDVLAGILRIEVAGVQINALDFSPQYKDAINQATLARTKTFAAQQDAE
                     RAKVEAQTRVTQAQAEADAQAARADGQARAQLAQAQAEANGNLARARAEAEGNLLKAK
                     ADAEALRLRGEGDAAATRARIEAAGGAENYVRQIDAQAKMRWNGQVPQFMLGGTGANG
                     PTMPIILPMQGPAPGAPTAQNAPAPAQAGR"
     gene            6562..8031
                     /gene="cysG"
                     /locus_tag="VLJ17_19860"
     CDS             6562..8031
                     /gene="cysG"
                     /locus_tag="VLJ17_19860"
                     /EC_number="1.3.1.76"
                     /EC_number="2.1.1.107"
                     /EC_number="4.99.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019904324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004851 - uroporphyrin-III
                     C-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0043115 - precorrin-2 dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0051266 - sirohydrochlorin ferrochelatase
                     activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0019354 - siroheme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="siroheme synthase CysG"
                     /protein_id="HSV25272.1"
                     /translation="MTAPRLPADLSPPRMDALARLPVFLALEGKRAVMAGGSAQAAWK
                     AELLSAAGASVEVFAPAPAEELMELAENPPRGTVMIHRRHITDDDFAGAAVAVGACQD
                     DVEAAQFAATARARGVPVNVIDKPAFCDFAFGAIVNRSPLVIGISTDGAAPLFGMAVR
                     SKIEAMIPRGFARWVTAARRWRGALFATGLSHPGRRRFWQIFARYAAIHPDREPTQSD
                     FDGFLAETMDDAERPDNGSVTLVGAGPGDPELLTLRAVRALQSADIILVDDLVAPEIL
                     DFARREAKKMLVGKTGHGPSCKQEEINALMVTLAKAGKRVVRLKGGDPMIFGRATEEI
                     AACRTNGIPVEVVPGISAAQGAASRLGVSLTHRERARRLQYVTGHGSDGRLPADIDWA
                     SIADPVATTIIYMPAKTLAAFAAAAIASGLDAATPAVAVTNATRPDETVIRATIADLP
                     QCFATAAVGGPVVVMIGRVFARAAVADLAGPQATHQAAG"
     gene            complement(8174..8530)
                     /locus_tag="VLJ17_19865"
     CDS             complement(8174..8530)
                     /locus_tag="VLJ17_19865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015952930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25273.1"
                     /translation="MSKRVALLGLLAALALGSLSSPAEAVWRGGGWHGAGWYGGGWGG
                     WRGNYRAPYYPRYYGGYYPRYYGGYYPRNYGGYYNAAYYPGYYGGYYGGYGGYGGYGG
                     YGGYGGYGGYGNDCWW"
BASE COUNT         1650 a         2908 c         2703 g         1662 t
ORIGIN      
        1 ctagcccttg cccgatcgtg tttaccgcca gagaggcgct actgatgacc ccgagcgtgg
       61 cgttcgccaa cgaataaacc cgcttggcat gaacatcctc gctaaataat gtgctcagaa
      121 attgatgggt cgcttcaaac gcaacgccct tgcgccgcgc caccgccatc atccaccccg
      181 tgattcacat gatctggatg gcagactctc cggttctcat gccgcgttca agtttgcaat
      241 cagcgcaggc tttcaaaaat cagatccgat gcttttcgga ttgatttcgc accccgcgcg
      301 attcttttat ttcaaaaaat gaggggatgg ccaagctccg cggatcgaat ccggggaggg
      361 caatgacact cagcgcataa ggaaaatgtt tagccgacct taccgttgct gctgctgctg
      421 ctgctgctgc tgcgccagca tctcaatgct gcgcggagtg ctttcggggg atcccagttc
      481 ccgggccttt tcgtaccaca tccgcgcttc cgaggcatcg gccccgattc cgcgaatgaa
      541 gcgcttggcc agaacgtccg gatcgtaggt cgcgcccatg gcaagcgccg ccgaggcatc
      601 gcccgcattg gcagcacggc ggaaaaatag gcgagcggcc gcaaggtcgc cggagtcaaa
      661 gagaatgcgg ccacgttcga cgaaagccgc gatttcccgc gcgctcaaca cggcggcttt
      721 cggagtcgca gcgccagggc tggtggtcgg cgggctgctc accgcgaccg cggtgcggag
      781 cgccggatca ggtggcaccg ccgcaacgcc tggcgaccgg tccagcggag cgacggcctg
      841 aaccacattc ggctccgcta ctgcggcggg ccttgggtcc atcggtggta tcgctcgcgt
      901 cgccatcggt tcggcctggg gcgcagtcga gatttcgtcg gcaggctgcg gacgcaaaga
      961 ccgcgaacgc gacggtgccg gggccggggc gggggccatc gcggccaagc gatcctcgaa
     1021 cgaacctgtg acggccacca tatcggaagg taccgccgtg tctgctcgct gcacccagct
     1081 ggcaatgaaa tatgcagcag gcgccgctat agcgctggca agcaaaaatt ttcccaaccc
     1141 tcccagccct cccagcccca gcgcactttc ccggcgatgc ggcacacgcg gcggaaacag
     1201 gctatcgggg ttgagtacga gcgaatctcc accttcgtgt gcttcaaccg gcggcaagcc
     1261 gcgcaccggt ggtaacgttg ccgctcgcgg cagacgttgg cgaacgctgc cctcgttcat
     1321 cagccagcga atgctttcct caagccgacg aagctcttcg ggatcggtcc cattcacatc
     1381 aagaaagcga agcgtcgatg catcgctcac cgtcacgttc cgcccgccac cctcgcggcg
     1441 atcgccgtct cccaaattga tcatccgagg caaccgagtt tccgcacgct cgatcggtgc
     1501 ggcctcaaac atttcgagtt gattttcgtc gggtccggca gactgcccct cggcgcgatc
     1561 gtcccgttcg gacggctctt tgcccgcgct cctcatgctc gtacactccc ctgcgaaact
     1621 ggagaacccc ctcgctactg gccgtaacct gccgacacga tcagcctatt ttgtgttgag
     1681 attcagaatt tactttcagg gtcggccaat ttaccggcca agattttcca caattgctcg
     1741 cgcccgtcta gcaaaattat cggttgtccc aaaaggggat atggttaatg tgcgaggctt
     1801 gattcgcgat cagaacagcc ttcgatcagc atgcgacaac cgcgggcatg acgaggcagc
     1861 ggattcaaaa tgcgccctaa ccggccgcaa gtggcgcgac gtcgacggcg cgaccttcgc
     1921 gtgcgctttg aatccccgcc agcaccaccg ccagatttcg cgaggcccac cagccgtcgg
     1981 tctcaggcct gccaccgtcg cgaatgcagg cggcgaattc gtcaagctcc tcccggatgg
     2041 tgtcgttcgc cgcaaccgca accgcgcgcg gcgccgcttc gccacggcgc aagtggcgaa
     2101 gcccgccgaa cagatcgtaa taggcgctcg cttccttgcc gtagaggttc atcatgtaat
     2161 actcggaggc cgacgcatag gaggccgtga ggttggagat cgcaccgcat tcgtgctcca
     2221 agatcaggct cgccacgtcc ggattgtcgc ccggaagcac cagctgcgcc gacgcgccgg
     2281 agacgcgtct gaccggcccg atcagcattt ccagcacatc cacgtaatgg atgccgatct
     2341 gcaacatgac gccgcccggc atgccggagg cctgatagcg ccatgacgac aaatcgatct
     2401 tgccgagccg gtcgcggctg atgttgcact ccgcttgcac cagccggccg aagcggccgg
     2461 catcgatctc cgtcttgacc cagcgaaaat ggttttcccg ccggcgctga tagccgagcg
     2521 ccagcaccac gccggcggcc gcgcagacgc gcgcaatctc acagccttcc gcgaccgtgt
     2581 tggcgatcgg cttgtcgagg aagacgtgct tgccggcctc ggccgccatg cgggtggtgg
     2641 cgagatgcgc gctgttcggc gtcgtgttga cgatcgcctc gatctcgcgg tcggccaaaa
     2701 tctcctcgta gctcgcggcg gcccggcagg cgtatttcgc cgcgaaagcg cgccgcttgt
     2761 cgtcggaacg cgtgtagcag gcggcgattt ccatcgtagc cgaacgctgg accgcgtccg
     2821 ccagcacgtc cgaccaccac ccgatgccaa ccaccgcgac gcgtagctta cggacgccgg
     2881 ggggttttgg atttgattca atcatgatgc gctgcagggg cgacacttgt ggtcgcccgg
     2941 ctttgcgcac tgcgtgcccc tgaattgata aaacgcgtca taccttctcc gcgttctcat
     3001 cgtctgccgg gaacggagga accacaacgg gcgccgctta agtcattgtt acgtcggcca
     3061 tcgaaaatga tccgacgcgc caccgtcatt tgatttgggt tcgcactcac accgaccact
     3121 tcgcaccgat cgcttctacg gcttcccgcg cgatacagac atcggtctcc caatcgccgc
     3181 cgctgacccc aatgccgccg atgcactcgc cgtcaacgat tatcggtaaa ccgccctcca
     3241 atgcggtcca ccgctcgggt ccagcggcga gcgccaaccc gatggcatgg gcgacatcga
     3301 gcggctgcgc ctgcgaaccc tgtgccgagg tcgtccgcct gctggaagcc gcgcagaccg
     3361 ccttggtggt ggcggaatgg acggtgtgga atcgcccgcc atccatgcgc tccagcacca
     3421 ccagatgccc gcccgcatcc gcgatggcca ccgcaatggc gatcccagtc tcctgcgcgt
     3481 gactaatggc gacggccgcc atctgcttcg ccccctggtg agtgagacgc ttggcggcgg
     3541 cgacgtacat gcgatgtcct ggaggtgatg tccggaaaga ttgcggccgg cgaaatccgc
     3601 aaagccgggg ccggcaagtt gcaccaagtc ctggacccga tcaagcggga ccggactggt
     3661 gttgcttatt cccgagcgaa cgcaagagcg agtttttcct tctcctaaca gggaatttgt
     3721 ccctggaaca ggcaaaaacg gtgattgtgg cttcgatcga ttttcgcccg tccgtggtcc
     3781 cgtgctctga tcgggtaaga cgaccatcag atgatattat aggacgattc ctataaggtc
     3841 aatgtcgctc cgaccatttt atcgcgccga tcattttctg aatactcggc ggttactgga
     3901 tctgcgcgcg ccgaacggcc cgcacagccc ccaccaggcc ttaagacgaa ggcgcgcggc
     3961 cggagggcgt cttgatcacg atccacacca tcatgtccca ggcgttgcga acggcggcga
     4021 acagcaacgt cagcacagcg gcggcgatca gattggcgct cgcggtggcc tgcatgaacg
     4081 atagcgccgc cgcaatcagc gcgagcaaat atccgagaag tggaaggagc gcgtagaaca
     4141 accggtcgct caaatccacg ttgaaccgct gtcggatgat catcgaaacg accaggcttc
     4201 cgcaatagat cgagcccgcg agccctccgg ctccgatgag accgcccagg gtgcgccagc
     4261 tctgggtcgg tatgttgatc agaaggcagg tgaacagcac ggcggcaaag tgcaccacgg
     4321 tcggcgtgat gaatgccgtc aacccggcgc ggtgatcttc atcaaagatg ctcgacccga
     4381 tcgacgccgc gacgaacatc agcccgacca gcgtagcgga tgccgtgccg acgaggagat
     4441 aaaaatcgtg ccagtcgtga agcagttccg cgagcgatgg ccccatatgg atctacctgt
     4501 gccaatagcg atcatcgctt atagctttga tcggcccccg cagaacgtca agggacgatc
     4561 gcgcgcccag aaggaggcga tgatcaaagg agagtgggtc tgcctgaatt ggcaaagcac
     4621 cggagcctga tcttttcgat cacctcgtag acaagccgca ataagatgcg gttgtgttac
     4681 tcatctctca aaagatgacc gatatgaagc tgccgaggcg gcgccggctg cggccaccac
     4741 ggtctttttg tgaacatcca acccggcaca acgttgatgg gaagacttcg ctctacgaag
     4801 ccggttgatc tgaaccggcg gtctctttct gctcccccgc gcctgctctt gcagggtgag
     4861 gggcacggcg gctgcacaaa ctcagacgcg ccaacagact tacgaagagg ccccctcacc
     4921 tccccgcttg cgcgggcgcc ggcgcattct gtgccgtggg cgcacccggc gcgggcccct
     4981 gcattggcaa gatgatcggc atggtcgggc catttgcgcc ggtgccgccg agcatgaatt
     5041 gcggcacctg gccgttccag cgcattttcg cctgggcgtc gatctggcgg acgtagtttt
     5101 cggcaccgcc ggcggcctcg atgcgggcgc gggtggcggc ggcgtcgcct tcgccgcgca
     5161 gccgcagcgc ctcggcatcg gcctttgcct tgaggagatt gccctcggct tcggcgcgag
     5221 cgcgggcgag gttgccgttc gcctccgcct gggcctgagc gagctgcgca cgcgcttggc
     5281 cgtcggcgcg cgccgcctgg gcatcggcct ccgcctgggc ctgggtgacg cgggtctggg
     5341 cctcgacctt ggcgcgctcg gcgtcctgct gggccgcgaa agtcttggtg cgcgccaacg
     5401 tggcctggtt gatggcgtcc ttgtactgcg gcgagaaatc gagcgcgttg atctgcacgc
     5461 cggccacttc gatgcgcagg atgccggcca gtacgtcgga cagcttgccc ttgatctccg
     5521 ttaccaccat ctcgcgctgt tcgccggcga tctccgtgat cgagtgcttg gacagcacct
     5581 cgcgcaccac ctcgttggac aacaggatga tattgctgtg gatgtccacg ttgccggctt
     5641 tgccgatctc atagagcagg tgataggtgg cagtggtcgg tacccggtag gtgacgccga
     5701 cgcgcagcgt gatttcttgg gtgtccttag tgaacgcctt cttctctggc agctcgaagg
     5761 tgtcggtggt gatgcggatc aggtccggcg catcgatgaa cggcatcttg aggtgaaggc
     5821 ccggctgcaa cgggccgtcc tgcggatcga tcaccttgcc gaagcgcttg acaaaggcga
     5881 cctcggtctg cggcacaatg aagtaggaac cgcccgccat cgccaggacg gcgacgacgc
     5941 cgatggccgc cggaatggcc cagcgggtgg aagatgcggc ggcggtggtg gcaagttgcg
     6001 gaaggcccat ggctgctcag cccgtcaaga ctgctcctct ggtcacggtt cggggtgaag
     6061 ctttgcccgc atattggcat acgggtgtag gaatgaattc acgtgcgtcg ccaactctca
     6121 aacgtcatcc cggcaaaagc agggatccag taacccggca acactgcgca atacatcccc
     6181 gctttcgcgg gggacgatgg tcatttgttc cgccggaggg tgctcgggtt caatcgatgc
     6241 tccggccatg gaccgtgcgg cggcttcggc actttaacgc cgtgacctta agcccaaaag
     6301 attaaaggat tttccagcat gacggtgcga cggtacaggc aaaatggccc gtggtaattt
     6361 ggatattaac cgctgctccc tccccttgtg ggggaggggt cgggggcgtg ccggaccatg
     6421 ccacatcggt cgaccccaac tcctccccac acggggcagg ggaagattcg gcacaggatt
     6481 tgctgtcgta caacgcgtgg tgcaacacaa cgccgattga cgttgcggcc gcttcgcacc
     6541 acatcaggat acggaaaacc gatgactgca ccgcgccttc ccgccgatct ttctccgccg
     6601 cgcatggatg cgctggcgcg gctgccggta tttcttgccc tcgaaggcaa gcgcgccgtg
     6661 atggctggcg gtagcgccca ggcggcctgg aaggccgagt tgctatcggc cgccggggcg
     6721 agtgtggaag tgtttgcccc ggcaccggcc gaggagctga tggagctcgc cgaaaacccg
     6781 ccgcgcggca ccgtgatgat ccaccgccgc cacatcacgg acgatgattt cgccggtgcg
     6841 gcggtcgcgg tcggtgcgtg ccaggacgac gtcgaggccg cgcaattcgc cgccacagcc
     6901 cgcgcgcggg gcgtaccggt caacgtcatc gacaagccgg cattctgcga ctttgccttc
     6961 ggggccatcg ttaaccgctc gccgctggtc attggcatct cgacggacgg cgccgcgccg
     7021 ctcttcggca tggcggtgcg ttccaagatc gaagcgatga tcccgcgcgg cttcgcgcgc
     7081 tgggtcacgg cggcgcggcg gtggcgcggc gccttgttcg cgaccgggct ttcccacccg
     7141 ggccgtcggc gtttctggca gatttttgca cgctacgcag cgatccaccc ggaccgcgag
     7201 cccacgcaat cggacttcga cggctttctg gcggaaacca tggacgatgc cgagcgaccg
     7261 gacaacggat cggtgacgtt ggtcggcgcc ggtccgggcg atccggaact ccttacgcta
     7321 cgcgccgtgc gggcgctgca gtcggccgac atcatcctgg tcgacgacct agtggcgccg
     7381 gaaattctcg attttgcccg ccgcgaggca aagaagatgt tggtgggcaa gaccggccat
     7441 ggtccctcct gcaagcagga agagatcaac gccctgatgg tgacgctcgc caaggccggc
     7501 aagcgcgtgg tgcgcctcaa gggcggcgac ccgatgatct tcggccgcgc caccgaagaa
     7561 atcgccgctt gccggactaa cggcatcccg gtcgaggtgg tcccgggcat tagcgccgcc
     7621 cagggcgctg cgagcaggct cggtgtgtcg ctcacccatc gcgagcgcgc gcggcgcctc
     7681 caatacgtca ctggccacgg ctccgacggt cgcctgccag ccgacatcga ctgggccagc
     7741 attgccgacc cggttgccac caccatcatt tacatgccgg cgaagacgct cgcggccttt
     7801 gcggctgccg cgattgcatc cgggcttgat gccgcaaccc ccgcggtcgc ggtgaccaac
     7861 gccacccgcc cagatgaaac cgtgatccgc gcaaccattg cggacttgcc gcaatgcttc
     7921 gccacggcgg ccgtcggtgg cccggtggtg gtgatgatcg ggcgcgtgtt cgcgcgcgcg
     7981 gcggtggccg acctagcggg cccgcaggcg acccaccagg cggccggatg atcgtcatcg
     8041 ctccgcggca gcgcaccgtt gggtgcgaca ccgcttcaaa cctagatccc gccgctgccg
     8101 ggcatcgtcg ccctgcactg ctgcaaactg ttaaatgtta ggaaaactga tagctgcttg
     8161 cggtcttgga ggatcaccac caacaatcgt tgccataccc accataccca ccatacccac
     8221 catacccacc gtacccaccg tacccgccat agccaccata gtaaccgcca taatatcctg
     8281 ggtagtatgc ggcattgtag taaccgccgt aatttcttgg gtagtaaccg ccataatatc
     8341 tcgggtagta gccaccgtaa tatcttgggt aatacggcgc ccggtagtta ccacgccatc
     8401 caccccatcc gccaccatac catccggccc cgtgccatcc cccccctcgc caaacggcct
     8461 cggcagggct cgacaggctt cctagtgcca gggctgcgag caatccgaga agcgcaacgc
     8521 gtttcgacat ggtacgtctc cctgctttct gcagttacaa aaaaggctct tcgttaattc
     8581 gggctctccc cccgacgatc tcctgcgcct tgcgagatct ccgttcgctc gaatatcccg
     8641 ccaaaataga atataccgtc cggacctcct gtaaatctcc gattacgtca ctctgccgtg
     8701 atgcaatctc gaagaggagc agcggcccgc tagcgcccgt cacattttgg ccatccaccc
     8761 gaattgagaa ctccggcacg atcgtggcaa cgattcgatt gtggggcact gccgaagttt
     8821 gttcagctgt tcgagccagc acgtgcttcg atgaagccaa tcatccatca atccgcgggg
     8881 ccatcttctt cgtaggatga tggattttgc aaactcgcta cca
//
LOCUS       DATILV010000817         3778 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1478539, whole genome shotgun sequence.
ACCESSION   DATILV010000817 DATILV010000000
VERSION     DATILV010000817.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3778)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3778)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3778
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1478539"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..987)
                     /locus_tag="VLJ17_19870"
     CDS             complement(<1..987)
                     /locus_tag="VLJ17_19870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25274.1"
                     /translation="MEDDMQGRRTFAVICFIFAAQPTFQSTVDAGWDPFSYFKSQTPT
                     QMQVNVQSALAEPIARVHAFFAHVGVLPILNPLGEVPGDIYADLLGGSFLARKTRCFP
                     RLKIQSSSSQLPTINDASELEITGDIHAAFEDAKLVGANAGLRFMKNGDIEFSKITAS
                     STTPIDLQSVFLSKSQVCRPVAHLVQPGTRPAGPWFNGIILATVWTGRIDAKWVVQAE
                     LNGKIGGTTSEILKLLGDYVKKITDHSIPVNVDIGTEVKVDGNLGRKIVVSSAKPLPI
                     AWLPAYVSRQHLAEILEALRQGKLDRLQTGFLQERNSGKSNADIAEMISDAAE"
     gene            1683..2039
                     /locus_tag="VLJ17_19875"
     CDS             1683..2039
                     /locus_tag="VLJ17_19875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25275.1"
                     /translation="MLGLDAYPAVREGLAHQSADVRYWCCQFLDHFLTSEVMDELVAM
                     LNDIDDRVRCSALHSLACDRCKEGSCSPEEGKVLPQAIALLVSDPDPMSAPAPSDWWD
                     VGFTPIATPRPRFCKQ"
     gene            2221..3678
                     /locus_tag="VLJ17_19880"
     CDS             2221..3678
                     /locus_tag="VLJ17_19880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HSV25276.1"
                     /translation="MKETDRRDILRNAGLAVTAAAIGESTQAQAQAPKAVLKQAELPN
                     DLTRKLARFIMSARLADMPEAVRHEAKRTLLNWVGCALGGSQHETVVNAVAALSAFFG
                     AHQATLFGRPERPDVLHAALLNGISSHVLDFDDTHSQTTIHPAAPVAPAILALAEYQQ
                     VSGWDFIEALVVGVEAECRIGKAAVPAHYDAGWHITGTAGVFGSAAAAGKLLGLNEQQ
                     MCWALGLAAAQPVGLIEMFGSMAKSFHPGRAAQNGLAAAHLAAEGFTASEHALEAHFG
                     WLNVLSTERNSAALDGEGWEILKNSYKPFACGLVVHPVIDGCIQLHNSSRPTADMIER
                     VEVVVHPRVMQITAIKEPKTGLEGKFSVYHAAAVAIVEGAAGERQFSDEAVRAPATAA
                     LRRRVFPTPDPAIGKDQARITVVLKSDERPTIFVEHAVGSVENPMSDRMIEDKFHSLA
                     DGVVSRHQARSIVDLCWRVDELADAGEIARTAGKS"
BASE COUNT          800 a         1073 c         1140 g          765 t
ORIGIN      
        1 ttcagctgcg tctgagatca tctcagcgat atcagcgttc gacttgcccg aattccgctc
       61 ctgcaaaaat ccggtttgca gtcgatcgag cttaccctgc ctgagggcct ccaatatctc
      121 ggcgagatgt tgccttgaca cataggctgg cagccatgcg atcggcaatg gttttgccga
      181 tgagacgacg atctttcgac cgagatttcc atcaaccttc acttcagtgc caatatcgac
      241 attcacagga atgctgtggt ctgtgatctt cttcacatag tcccccagga gcttcaaaat
      301 ctccgaagtg gtgccgccga ttttcccgtt cagctctgcc tgaacgaccc atttggcgtc
      361 gattctgccg gtccataccg tagccaggat aatcccgttg aaccaggggc cggccgggcg
      421 cgtgccgggt tggaccaggt gcgcaaccgg ccgacagact tggcttttcg agagaaacac
      481 actttgcaga tcaatcggtg tcgtgcttga agcggtgatt ttgctgaact cgatgtctcc
      541 gttcttcatg aaccgcagac cggcattagc gcccaccaac ttggcatcct caaacgccgc
      601 atgaatgtca ccagtaattt caagctccga agcgtcattg attgtcggca gttgcgacga
      661 gctcgactgg atttttagcc gtgggaagca acgagtcttt cgagcgagaa agctacctcc
      721 cagcaagtca gcatagatat caccgggtac ctcaccgagt gggttcagta tcggcaacac
      781 gcccacgtgt gcgaagaatg cgtggaccct tgcaatcggt tcagctaagg cagattggac
      841 gttcacctgc atttgtgtgg gtgtctggct cttgaaatag gagaatggat cccagccagc
      901 gtcgacagtc gattggaaag tcggttgagc agcaaagata aagcagataa ccgcaaaagt
      961 tctccggccc tgcatgtcgt cctccatttt gcgcacattc ggcgaacgca aggtgttcgt
     1021 ccggcgcctc actagcatac ttaggcggcg ccctgcattt tcttgcgttc cgggtccctt
     1081 gcgaaaggct tgcgcctagc acaccccgct ctcggcgagg gccaggttgc agcagctgcc
     1141 gtaaccaaca accaagaaaa ggaggcccca agccgatgtc tattccttgg gaaagctgat
     1201 gttctacatg ctctcctgcg ggatcgttgt gcctcaggag accttgcacg acgaacgata
     1261 tagccagcta ttcgctgaca gcgagcgcgc agagcgtttc cgctttcact aatgatcagc
     1321 cctctggctc agcgtctcaa gacgatgaag gtgattcaag gcttacaggc gattgaggac
     1381 tgggaacgga acgctcacat ttcgctgatc agtgcccaag ggctcgcggg aatcgagcag
     1441 cccgacggcg tgtgcgtcac gtggcaacgg aaaacgagtc tgctcgtgag caagacagac
     1501 gcgcgattta gatatcgtca aggacagttt cgaggtatgg cgcaaggctc agccgatcgt
     1561 tgcggcggct caatttcctc caagttatcg aaaaaattgg agcgggtgaa gagcgtcgat
     1621 ccaaaacttt tcacaagcaa atcaaatagc ttacgtcgtt ccggcgaaat gtgttggagg
     1681 aaatgttggg gctcgacgct taccccgcgg ttagagaagg acttgcgcac caaagcgccg
     1741 acgtgcgtta ttggtgctgt caattcctcg atcatttcct cacttctgag gtcatggatg
     1801 aattggtcgc gatgctcaac gacatagacg accgcgtgcg ttgttcagcg ttgcactcac
     1861 tggcatgcga ccgctgtaag gaaggttctt gtagccccga agaaggaaag gttctgccgc
     1921 aggcgattgc cctcttggtc agtgatccag accccatgtc cgcgcccgcg ccatcggatt
     1981 ggtgggatgt cgggttcaca ccaattgcga cgccgcggcc gcgcttttgc aagcaatgag
     2041 gtcgggtttg agtcccgcgg tgcggaagaa ggctagttgg tatgtcccgg caggacggtc
     2101 tatcgacgga ccgctccgaa agtttcgaaa atagctagaa agggtcccta aacctgaact
     2161 ttgacgctac cggcatgacg ttgacacgca attttggttt tgcacaatcg gaggccagcc
     2221 atgaaagaaa cggaccgccg cgacatcttg cgtaatgctg gattggccgt cacggctgcc
     2281 gcgatcggcg aaagcacgca ggcacaagcg caggccccta aagcggtact caaacaggcg
     2341 gaactcccga acgacctcac gcggaagctg gcgcgcttca tcatgtcggc gcgcctcgcg
     2401 gatatgcctg aggcggtgcg ccatgaagcc aaacgcacgc tcctcaattg ggtcggctgc
     2461 gctttgggcg gttctcagca tgagacggtg gtcaatgcgg tggcggccct gtcggcattt
     2521 ttcggggcac atcaggcgac gctgttcggc cgccccgagc ggccggacgt actccatgcc
     2581 gcgctgctga atggcattag ctcccacgtg ctcgacttcg atgacaccca ctcgcaaacc
     2641 accattcatc cggccgcgcc ggtggcgcca gcgatcctgg cactggccga ataccagcaa
     2701 gtaagcgggt gggatttcat cgaggcactc gtggtcggcg tcgaagccga atgccggatc
     2761 ggcaaggcgg cagtgcccgc gcattacgac gctggctggc acattaccgg cacggccggc
     2821 gtgtttggca gcgccgcggc ggcaggaaaa ttgctcggcc tgaacgagca gcaaatgtgc
     2881 tgggcgctcg gccttgcggc agcccagccc gttggactga tcgagatgtt cggctccatg
     2941 gcaaaaagtt tccatccagg gagggccgcg cagaatgggc tcgcggcggc gcatctggcc
     3001 gccgaagggt tcacggcttc agaacatgct ctggaggccc atttcggctg gctcaacgtg
     3061 ttgagcaccg agcgcaattc cgcggccctc gacggcgagg gatgggagat tctgaaaaac
     3121 agctacaagc cgtttgcgtg cggtcttgtg gttcatccgg tgatcgacgg ctgcatccaa
     3181 ttgcacaaca gcagccggcc cacggccgat atgatcgagc gggtcgaggt ggtggttcat
     3241 ccgcgtgtca tgcagatcac cgcgatcaag gagccgaaaa ccggcctcga aggcaagttc
     3301 agcgtctatc acgcggccgc cgtggcgatc gtcgagggag ccgccggcga acggcagttc
     3361 agcgacgaag ccgtgcgtgc gccggcgacc gcggcgttgc gcaggcgtgt gttcccgaca
     3421 cccgatccgg cgatcggcaa agatcaggcg cgcatcaccg tcgtgctcaa gagcgatgaa
     3481 cggccgacga ttttcgtcga gcacgccgtc ggcagcgtcg aaaacccgat gagcgaccgc
     3541 atgatcgaag acaagttcca cagcttggcg gacggtgtag tgagccggca tcaggcgcgt
     3601 tcgatcgttg acctgtgctg gcgtgtcgat gaattggcgg acgcagggga gatagcgcgc
     3661 acggcaggaa agagctaagc gttcgtccag gaagcaggag aatcaatcgt tgtcatgcct
     3721 cgcgaaagcg gggcatgggc gggccctgat ttgagcccgc gcggcccggc gagcggct
//
LOCUS       DATILV010000818         3685 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3778777, whole genome shotgun sequence.
ACCESSION   DATILV010000818 DATILV010000000
VERSION     DATILV010000818.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3685
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3778777"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(630..1223)
                     /locus_tag="VLJ17_19885"
     CDS             complement(630..1223)
                     /locus_tag="VLJ17_19885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25277.1"
                     /translation="MPQPISSFVSGVFASLLAALALTILPSSVASSVENCVAEPTAKI
                     QEGSHWTYRIDRASGRKCWFVVRTGSRTAQAEAPEKKPAPEATPEPTFSSFFSSLVAP
                     FKKANQAGTQQDPANSDPRVTQPTPANALRSSDEGRRPRVADSQNSNATPDQKQHRQS
                     SARPEHAGEQRPADARNQAQQDALFQEFLRWKERQTP"
     gene            complement(1584..2940)
                     /locus_tag="VLJ17_19890"
                     /pseudo
     CDS             complement(1584..2940)
                     /locus_tag="VLJ17_19890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015687383.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
     gene            complement(2984..3307)
                     /locus_tag="VLJ17_19895"
     CDS             complement(2984..3307)
                     /locus_tag="VLJ17_19895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HSV25278.1"
                     /translation="MKTDDAARRLEALGNPTRLQVYRALVRAGQAGMPVGKLQAKLDL
                     PASTLSHHLKALISVGLVTQERQATTLICRANYEVMRGLVDFLVAECCADAACAPPQT
                     KGKAA"
BASE COUNT          689 a         1104 c         1125 g          767 t
ORIGIN      
        1 ccactccacc aatcacgccg atggcaccgc cgatgatgac gggtaggaga acgagccaca
       61 ccgatgtggt cgtcgcagtg gtggtggcat cgggcattga ctaactctct cactctcttc
      121 ctcgtaagat aagctagcaa aaatggcggc gggtgtcgca gtcgtggcgt aatcacgaag
      181 gctcacgaat gatcacactt ccgatgacgc tcgctcgcaa gatgacgaac catcttctcg
      241 gctgctacgc ttgatcccga tggcacggga gcggtgtcct caccagctcg ccccggcgcc
      301 atccggcgga cggttggagg ccacggccgt ccgccactgg gctgacgcgg tggtgtttca
      361 tgcaggggcg tcatggcccg aggtaatcat tctgccccgc cgagccgtaa tcacacatgt
      421 tatgaaagcg tttgcggaca cgttgcggcg ttgctagagc gcattccggt tgaggtgaat
      481 cggaaaacgc ggtgtaaaat gcggcgcgaa agatatcgac cgtgggcgga tcgctttgag
      541 acgttcaggt gttggccggc catattccgc aaaccgcgca gcggtacatc aatgcagacg
      601 ccaggcccgg aacgggatcg ttcaggggtc taaggtgtct gccgttcctt ccaacgcaga
      661 aattcctgga acagtgcatc ctgctgcgct tggttgcgag cgtccgcggg tcgttgctcg
      721 cccgcgtgct ccggtcgcgc ggacgactgt cggtgttgtt tctggtcagg ggtcgcgttt
      781 gaattttggc tgtcggcgac gcgcggccgc ctcccctcgt cactgctcct cagagcgttt
      841 gcaggagtgg gttgcgtgac acgcgggtcg ctattcgccg ggtcttgttg cgttcccgcc
      901 tgatttgctt tcttgaaggg cgcgacgagc gaggagaaaa aagaggagaa cgttggctct
      961 ggcgttgcct cgggcgcagg ctttttctct ggcgcctcgg cctgagccgt ccgcgatccg
     1021 gttctcacga caaaccagca cttacgcccg ctggcgcgat cgatgcggta ggtccagtgg
     1081 ctgccctcct gaatctttgc ggtcggctcc gcaacgcaat tttcaaccga agacgcaacg
     1141 ctgcttggca ggatggtcag ggccagggct gcgagaagac tggcgaagac gcccgacaca
     1201 aatgaggaaa ttggttgtgg catgtggctc tcctgtcatg tctatcgatt tctatcgatg
     1261 ctcgcgccgc tctatcccgt tccgtttccg gtgagaaaat ctcgattcat tctggtcgca
     1321 atgcgtcgcc atttcgacaa tacgtgcgtc agatcaagcc caaattgcga cggggcaagc
     1381 agcgcaacta tagcatgttt atgagttcat gtccttgctt ggttgccaag ttttcaaaac
     1441 gcgcgccgac acgagcgaat ctgcccgaat gtcaccccgg cgatcgaagc ttgaccctca
     1501 cggattgcga cggagaaatt gctgaaagca tctgtccgaa gcaaaacctg ggaatggcag
     1561 gtcgttttac gacattatat tcctcaacca actgcacctt tcgccttggc ggcttgcact
     1621 gccacgcaga aggcggtcgt gtcctgccga gcaggcccgc cgcaggcatc agacttgttc
     1681 agcaaccgcg ataggcctgc tacagacgcc cgtttccggc aggacgagct cgacacgctc
     1741 ggcagctttg cggtcgcctg cgatatcggc gatgatcgag cgcacttgct cgtagccggt
     1801 cagcatcaga aaggttggcg cgcggccgta ggatttcatg ccggcgaaat agaatgcggg
     1861 ttcgggctgc gcgagttcgc gagcgccatg cggcctgact gtaccgcagc tgtgctcgtt
     1921 gggatcgatg aggggcgcga gcatgggcgg gcattcgagt gccggatcga gggcgatacg
     1981 tagctctcgc aggaaggaaa aatcaggccg gaatcccgtc gcaacgatca actcgtccac
     2041 catcacctga cggccgcaac atgccgtacc ggcgccgatc gcaaggcgtt catcccgcat
     2101 ggagagatgc ttcaccgcaa aacccgcttc cacctccagc cgcccttctt tcaccagccg
     2161 cgcgaagacc gcgccgagtt gaccgcgcgc ggcgagcttg tcgttgacgc caccaccgaa
     2221 cgccttctcc ggcttgtcgc cacgcaagag ccaggccgcc tgcgtgcccg gcgtttcctc
     2281 cttgaggcgc acaaggtcga tcagcgtgcc gattgccgag tggccactgc ccagcacggc
     2341 aaccctcttg ccggcgtagc ggcttcgatc aacgccgagc acgtccggca ttgcgtaggc
     2401 gatgcggccg cgcgtttccg cctcaccgat ggcttcaagg ccattcgccc cggccggatt
     2461 ggggaacgac catgagcccg atgcgtcgat gatcgcgtcg gcgcggacgg tctttggccc
     2521 cgcaccgttc tggtagcgga gttcgaagcg ggcctgatgg cgcccctcgg tttttacctt
     2581 gtcgaaaccc gtccggctaa tggctgtgac gcgacttgac gcttgaatgt gatcctcgag
     2641 tgccgttcgc gccgcgagag gttcgagata gcgctccgcc aactccgccc cggtcgggta
     2701 gtggtgcgga tcaggcgaat tccagccggc cgagacgagg aggcgttcgg ccgcgcggtc
     2761 gatgttgtat tcccagggcg agaacatgcg cacatggccc cactgccgca cggcgtgacc
     2821 aaccgccggg ccagcttcga gcacgagcgg cttgaggccg cgtgcgagcg catgcgcggc
     2881 ggcggcaagc cccacgggcc ctgcgccgat aatagcgacg gtcttttgtc ggtcactcat
     2941 tgctttcatc cttccagaaa catggaattt taaggcaaat caactaggca gctttgccct
     3001 ttgtttgcgg cggcgcgcag gcggcatccg cgcagcattc agcgacgaga aaatcgacga
     3061 gccctcgcat cacttcgtag ttggcgcggc aaatcagcgt cgtcgcctgg cgctcctgcg
     3121 tgacaagacc gacagagatc aaggccttga ggtgatgcga tagcgtggag gccggcagat
     3181 ccaatttcgc ctgcagcttg ccaaccggca tcccggcttg gcctgcgcgc acaagggcgc
     3241 gatagacctg gagacgggtc ggattgccaa gtgcttcgag gcggcgggcg gcgtcatccg
     3301 ttttcatggg acggggtatt ccacgagagc tatggcttgt caactatatt tctagtataa
     3361 tcgaaatatg gtcgtttgct tgtcgccaat gtgccacgcc atgacgcctc gcagcaaagt
     3421 tgaggacctg tgtgactttg gtcttcgcca actcgtatgt agagatctca tactcggcga
     3481 ttctctcgtc gtggacacgg cgcatgttgc ggtttcgcga tcgaagacgc actccagcac
     3541 acccaccacg aacttcatcg aactgtggtc gtcgtttaat acgctaagca ttcggaccca
     3601 tgcgtgactg actgcggaga cgttcgagat ttgcgatttc tttgtcgcat ggtcctgcga
     3661 tcagcctttg aacggcatgc tgact
//
LOCUS       DATILV010000819         4024 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3011644, whole genome shotgun sequence.
ACCESSION   DATILV010000819 DATILV010000000
VERSION     DATILV010000819.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4024
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3011644"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..351
                     /locus_tag="VLJ17_19900"
     CDS             <1..351
                     /locus_tag="VLJ17_19900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016921282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
                     /protein_id="HSV25279.1"
                     /translation="LRDRDASYGPVFGDRIRVMGMKEVVSAPRSPWQNPYVERPIGSI
                     RRECLDHIVIFNERHLRRVLSRYFQYHHWTRTHLSLDKDCPQPRRIQPPSAGDIIAFP
                     EVGGLHHRYERRAA"
     gene            complement(1018..1953)
                     /locus_tag="VLJ17_19905"
     CDS             complement(1018..1953)
                     /locus_tag="VLJ17_19905"
                     /inference="COORDINATES: protein motif:HMM:NF013507.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kelch repeat-containing protein"
                     /protein_id="HSV25280.1"
                     /translation="MRRIETFAAALLVGAALLGAAASAQGTGHWTIGAPMPSARTEVA
                     VAELGGKIYVVGGFGGERELEIYDPVADRWSRGAAIARELHHAAAVGLQEKLYVVGGY
                     VDGWTPTNEVHEYDPVANRWRPLAALPTPRGALAAAVLGGKIHAVGGVGWRGRNTPAH
                     ESYDPATNRWTALASVPTPRDHLAVAAADGRLYALGGRIDGSYSRNLATNEAYDPAAD
                     RWEQRAPMPTARSGIAAAVLHGRILVVGGEAPSGTFHQVEGYDAKSNGWSSYARMPTA
                     RHGLGAAVVAGKLYVISGGPAPGASASAANEIFAP"
     gene            complement(2005..2679)
                     /locus_tag="VLJ17_19910"
     CDS             complement(2005..2679)
                     /locus_tag="VLJ17_19910"
                     /inference="COORDINATES: protein motif:HMM:NF019228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25281.1"
                     /translation="MQRSRCGPPVGICLAIVSKITGLARSTINRGKNDLDAEPLPKGQ
                     VRRAGGGRRALSENDPGLVTALKRLVEPATLGDPMRPLIWVSKSMAKLAAVLTEMGRP
                     ISADTVRKELVKLGFSRQSNRKADEGSKHPDRNAQFEHINAKVIAAQARQQPVISVRY
                     EEELAAPIRKYPAKIFGDAGSRNTAYVFHTAWTQSRHAERRIIERNWHPLTPSRYHVP
                     RCPDVL"
BASE COUNT          774 a         1258 c         1197 g          795 t
ORIGIN      
        1 ctgcgggacc gagatgcatc gtatggtccg gtcttcggcg atcgaattcg ggtgatgggc
       61 atgaaagagg tagttagcgc gccgcgttca ccatggcaga atccatatgt cgagcgcccc
      121 atcggctcga tccgccgcga atgcttggat cacatcgtca tcttcaacga gcgtcactta
      181 cggcgcgtcc tctcgaggta ttttcaatat catcactgga ccagaacaca tctgtcactc
      241 gacaaggatt gtccgcagcc tcgccgcata cagcctccct ctgcaggcga catcatcgcg
      301 ttccccgagg tgggcggcct gcatcatcgc tacgaacgtc gcgcggcatg accgcagaga
      361 tcagcgaact tcggcgtgaa ggatcgctgc attttcgacc gttgtgctca catgcaacgg
      421 gtgcccagaa tttccattca ttttgcagca gtcgcaggcg tccggcccag aaatacatct
      481 tccatgatcg gccgattcca acgccatata catttttgag caacggccgg cggcacgcga
      541 cgcgcatagt atgacgcgca tactataagg agaaaccgtg ggttgtagga cggggactct
      601 gcccgacaag atgatgaccg tatgaagggt gcgcccctcc gatggtcgca ggccttcgtt
      661 acgccgacgc ccaaggtgcg gcgacgaaac tggaaggcga ggatggaaat gacggtggac
      721 agaatcgtaa tcatgcgtgc gacggtacgg cagtggcgcc aaaatcttag acttctgggc
      781 agttcggagt tttgagcaag ctcaagggca aagagccgag cctcataggt gcctgcaccg
      841 tgaattattt ccccatacgg cgcgccccgg cgcgctacgc tctgaagatc aaaaattggg
      901 cctcagcccg ggagggaatg gcatgaggcg acgcgatttc ttatggcaca tcacgtcagt
      961 atgaccgatc tcgcagcttt ccaccaagtg aggtgtagcc gacccagcgc gcaggcgtca
     1021 gggcgcgaaa atttcattgg ccgccgacgc cgaggcaccg ggggcgggcc cacccgaaat
     1081 gacatacagc ttgccggcga ccaccgccgc gcccaagccg tgccgcgccg tcggcatgcg
     1141 ggcatagctg ctccagccgt tgctcttagc atcgtagcct tccacctggt ggaaggtccc
     1201 ggagggcgct tcgcccccaa ccaccaagat gcgcccatgg agcaccgccg cggcaatgcc
     1261 gctgcgcgcc gtgggcatcg gcgcgcgttg ctcccagcga tcagcggcgg gatcgtacgc
     1321 ctcgttcgtg gccagattgc gcgaatagct tccatcgatt cggccgccga gtgcgtagag
     1381 gcgtccgtcc gccgcagcga ccgccaagtg gtcgcgcggc gtcggaacgc tcgcaagcgc
     1441 cgtccaccga ttggtcgcag gatcgtagct ttcgtgcgcc ggcgtatttc ggccgcgcca
     1501 gccgacaccc ccgaccgcgt ggatcttgcc gccgaggacg gcggccgcga gcgcgccgcg
     1561 gggcgttggt aaggcggcga gcgggcgcca gcggttcgcc acagggtcgt actcgtggac
     1621 ctcgttggtc ggcgtccagc catcgacgta gccgccgacg acgtagagct tctcctgcaa
     1681 gcccaccgcc gctgcgtgat gcagctcgcg cgcaatggcg gcgccgcgac tccagcggtc
     1741 tgccaccgga tcgtagattt ccagctcgcg ctcgccgccg aacccgccga ccacgtagat
     1801 tttgccgccc aattcggcca ccgccacctc ggtgcgcgcg gagggcatcg gggcacctat
     1861 ggtccaatgg ccagtgcctt gcgccgaggc cgcggcaccg aggagcgccg caccgaccag
     1921 cagcgccgca gcgaacgtct cgatcctgcg catgtcgcct cctacggact cgttcgagcg
     1981 cgtctggata ccacgccatg cgattcatag cacatcgggg catcgcggca cgtggtaccg
     2041 ggacggggtc agaggatgcc aattgcgttc aattattctg cgctccgcat gtcggctctg
     2101 ggtccaggct gtgtgaaaaa cgtacgcggt gttacgggag ccggcgtcgc cgaagatttt
     2161 ggcggggtat ttgcggatcg gcgcggccaa ttcttcttcg tatcgaacgg agatgacggg
     2221 ctgttgtcgg gcctgcgctg caatgacttt cgcgttgata tgttcgaact gggcatttcg
     2281 gtcgggatgc ttcgaacctt cgtccgcctt gcgattggac tgacgcgaga acccgagttt
     2341 caccaactcc ttgcgcaccg tgtcggcact gatcggacgt cccatctccg tcagcaccgc
     2401 agccagtttc gccatgcttt tcgacaccca gatcagcggc cgcatgggat cgcccagcgt
     2461 cgcaggctcc accaggcgct tgagtgcggt aacgagcccc ggatcgttct cggaaagtgc
     2521 tcgacgcccg ccaccggcgc ggcggacttg tcccttcggc agcggttccg cgtcgagatc
     2581 attcttgccg cgattgatcg tcgaacgggc gagcccggtg atcttcgaga cgattgcgag
     2641 acaaatcccg accggcggtc cgcacctcga ccgctgcaaa caatcgctgc ccccgctcgt
     2701 cgagcttcga gccgatcgcg tcccatcgct gccgaatggc gtcctggtcg atctccgtga
     2761 cttacggagc catccgtctt caaaacacca accaactggc ctttgcgccc gtagacatgg
     2821 aagtgttggt ctccggtgcg gtgatgcgta tcccgatcaa cgcgaatgct attcttgaac
     2881 cgccctacta tccattttcc ctcacgtagt aatctggcgc tttctccatc ctcagtgacg
     2941 aagatatcat ctaaaggcgg cgggctgatc caatccacaa actgtttaaa tgatagcatt
     3001 cgttgcatgt cccctgtctg cttgtttgcc gttttgaatt gcccgtccga ctctcatagt
     3061 tgcatcggag ggccgtcagg gggattggcc gcaggagcag gaagaattgg gggcggatgg
     3121 cccggcggcc ttatggaaaa tccgcttacc gtagcgccat tcggcatcgt gcaatgacat
     3181 ggcgcgccga ccctcgcaag tggtgctaga agtccgcact ggaactgcgg agtttggcaa
     3241 cccatttgta ccggctgagc agccgctgcg ctgcataaag acgtgcccaa ggcaacggca
     3301 gcaacgatcc gcatcatgcc gcctcacagt cagatccaag gtattccata cagtaatgtc
     3361 ttgagactcc atctcaggtc acacttcctg gagttttata ttccgaacaa tcaccaacct
     3421 caagatcgcc aaatagggcg gacctctgca agcggcgccc gaaggctcct gatgtgcctg
     3481 gcaagcgtcg ctttgtgtgc aggctttgtc gaccggtcgg ccaagatgtg atccagcacc
     3541 gagggccgcc atcacagact tggcggacat tcctgcgcaa ccccaggtgc gtgcgcgtct
     3601 cgttgtaaca gagcaatagt cccagatcgt tggacggctc gtcgtagcgg cgcgtccttg
     3661 ccaaaccctg tccatggcga attcgtaaat tacgccgcga tcggcatctg gaacagaccg
     3721 cggcaatggt accgccaagc gtagtcgtca aggacggcat gggcgggcgg cggttctccg
     3781 gatctttctc ctggagtgct gccaccgagc gactggtgaa cgcgatcccg ttgtaataaa
     3841 ttctgaattc ttccagcttc cgccccaagt cgattgcgtt ccagagaaac tcccgtcgta
     3901 ttgtcccgat cagccgttcc acgaatggat gggacacggg tacgtacggg accgacttga
     3961 tctcctcgac ctcgagtatg cgcaagttgg cgacccaacg atggaaacga aatagcgggt
     4021 cgtg
//
LOCUS       DATILV010000820         6439 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3011825, whole genome shotgun sequence.
ACCESSION   DATILV010000820 DATILV010000000
VERSION     DATILV010000820.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6439)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6439)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6439
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3011825"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            95..1873
                     /locus_tag="VLJ17_19915"
     CDS             95..1873
                     /locus_tag="VLJ17_19915"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV25282.1"
                     /translation="MNRRDFIRASTAGLAAATIPAAGSGRAAENIVSEGQLGSLRSAA
                     PPDLQGLVGDGRQRRILLRGGVVLSLDPRVGDFEKADVLIDGKRISEVAPTVSAGDAE
                     IVDCTGTIVMPGFIATHHHQYETLQRSIIPDGLLAGAWPQESYGSVVQNIWTAGRIAD
                     PANPNNFIWDLGRAPYDPQDCYISELVACLSEITEGITTGTDTSQSSHTPEHTDAMIK
                     GLMDSGRRMVYAYTGGINRGSDGIPNEFPGAMNDTAKGIGRIAKTYFSSRDQLVTLGF
                     GGGPGPAAPGADYTGWQLARAFGASIHNHNVGGRNVVVDAATDARNLTDWSDVTFIHG
                     TRWQDEPLAQISYGSYGYPKENRSKAWEILRDRGAHVSIAVLIEMQMRHGMPPFQQAL
                     DHGILPSLSPDVDTNMTTDPFSLMRGTFCLQRALANDLAFAESNPGGLPVPQAVTSRQ
                     VIEMATIAGAASNRLLDKVGTLTPGKEADIVVLDARNINTWPMNNVPGTVVTMMNPRH
                     VRDVLIAGKVVYWKGKLVGWNVDALLRQIEQARERVLARINDTPKIGQLPQGNNSFAN
                     PYRPNFLAGCCDKGQNTTAPAYVLRP"
     gene            complement(2444..2929)
                     /locus_tag="VLJ17_19920"
     CDS             complement(2444..2929)
                     /locus_tag="VLJ17_19920"
                     /inference="COORDINATES: protein motif:HMM:NF017950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF992 domain-containing protein"
                     /protein_id="HSV25283.1"
                     /translation="MLKIYPTVTALALIGLLGASADAQAPTSWTQAGVLRCVVNPSIG
                     FIIAGHQSMECRFTQNPPIPLQAYEGALNMIGLNIGISAGGVFGWAVLAPTTGVPAGA
                     LAGEYVGASGDIGLGLGVGANVLVGGSARSFALQPVSVEGSVAVNVALGVSALQLRAV
                     P"
     gene            complement(2974..3663)
                     /locus_tag="VLJ17_19925"
     CDS             complement(2974..3663)
                     /locus_tag="VLJ17_19925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018447519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25284.1"
                     /translation="MTINRTASSIMAIAALLCVPGFAAAQTSTATPPHVPLQKTIGGA
                     DKTEVVPSLIVLNSSGVSLQGNKLALTGVSPTSIVFADRPVRAAGHDLTAHIVEDWGT
                     GSDNFAKDPPNATVSGFSKNGSVIRDVVVVLKTPKLEGDRLTFDVDILEGDLTGADGG
                     AAVFIDIIGRPLTPLSYAGVARRTAYRGAMYRGAAYGAAAYGAAAYGAAAAYGAYARP
                     ACGYYPYPPCY"
     gene            complement(3838..4050)
                     /locus_tag="VLJ17_19930"
     CDS             complement(3838..4050)
                     /locus_tag="VLJ17_19930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25285.1"
                     /translation="MSSEPRRVNDMLLETPSIERLSRIIGSVAAPAFLLGAVAALISV
                     PISRMNRVIDRSQFLHGIVDDNPGRS"
     gene            complement(4050..4340)
                     /locus_tag="VLJ17_19935"
     CDS             complement(4050..4340)
                     /locus_tag="VLJ17_19935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007591816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25286.1"
                     /translation="MVKFVGVGLAIVFVLNVGSSAGYLMGFAAHAAGGAPKDTLAAQI
                     RMQGSACDKPLSAVRDAKQSKPDEAVWVLKCGNATYRIRLIPDMAAKVERLQ"
     gene            complement(4485..4619)
                     /locus_tag="VLJ17_19940"
     CDS             complement(4485..4619)
                     /locus_tag="VLJ17_19940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25287.1"
                     /translation="MLFGLSNVVTTLNLLPAAIITTSLNDIALWSNTHALGVMPTLLR
                     "
     gene            5093..6049
                     /locus_tag="VLJ17_19945"
     CDS             5093..6049
                     /locus_tag="VLJ17_19945"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HSV25288.1"
                     /translation="MKPFLLGTMLATVLLTGSGIAQTPSWLPPADSARCPSKWGAGDE
                     RGSANHMKPQSVLNATKLVKTGEVIELSHPLNAQMPLAAGRVYDMQVKRTAESNLANK
                     RHGNEELMIAEMGQVGTQFDGFAHQTHDNVHYNCFKTAEIATRNGFTKLGIEKVGMLM
                     TRGVLIDVAGYKGVPMLGDTYEITVEDLEGAIKKQNLTFQPGDAIIIHTGWGKLWYTD
                     AARYAKGNPGLGVKASEFLIAKDPMLLGADTAPVEVNPNPDKLISLPLHQIALVINGV
                     HLLENLKLDELAAKNVSEFAFVMQPLKFQGATGSSVAPAAIR"
     gene            6234..>6439
                     /locus_tag="VLJ17_19950"
     CDS             6234..>6439
                     /locus_tag="VLJ17_19950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007592469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/Srx family N-terminal domain-containing
                     protein"
                     /protein_id="HSV25289.1"
                     /translation="MVTVREPVLHTVPITELRPTQITVGMREVHAKQKSWQQQGKKKR
                     AEFLGRHMIPVIRGPRDRLYVIDH"
BASE COUNT         1387 a         1959 c         1905 g         1188 t
ORIGIN      
        1 ccatcgccgc ggaaatgcaa aatcgctaaa atggtacaat cagcgtgccg tgaagcacga
       61 aggtcgcttc gcgacaaaca cgaagagggg tccgatgaac agacgcgatt tcatcagagc
      121 gagcacagcg ggacttgcag ccgccacgat tcctgccgcc ggcagcggga gggcagcgga
      181 aaacatcgtg agtgagggac agctcggaag cctgcgctcg gcggcgcctc cagatctcca
      241 gggcctggtc ggcgacggcc gacagcgtcg aattctcctg cgcggcggtg tcgtgctgag
      301 cctcgacccg agggtgggcg acttcgagaa ggccgacgtc ctgatcgatg ggaagagaat
      361 ttccgaagtc gcaccaacgg tctccgcagg cgacgcggaa atcgtcgact gcactggaac
      421 aatcgtcatg ccgggcttca tcgccacgca ccatcaccag tacgaaacgt tgcaacgcag
      481 catcatcccc gatggtttgc tcgcgggtgc gtggccgcag gagagctacg gttcggttgt
      541 ccagaacatc tggactgctg gccgcatcgc agatcctgcg aatccaaaca atttcatctg
      601 ggacctgggt cgtgcgccgt acgacccgca ggactgttac atctcggaac tcgtcgcatg
      661 cctcagcgaa atcaccgagg gcatcaccac gggaaccgat acctctcagt cctcgcacac
      721 acccgaacac accgacgcga tgatcaaagg tctgatggat tcgggccggc gaatggtcta
      781 cgcctacacg ggcggcatca atcgcggcag cgacggtatt ccgaacgagt ttcccggagc
      841 gatgaacgac acggcgaagg ggatcggtcg catcgcgaaa acatatttca gctcgagaga
      901 tcaactggtg acgcttggat tcggtggcgg tccgggaccc gcagcgccgg gcgccgacta
      961 caccggatgg cagctcgccc gcgcgttcgg cgcgtcgatt cacaatcaca atgtaggtgg
     1021 ccgcaacgtc gtggtcgatg cggccacgga tgcccgcaac ctcaccgatt ggtcggatgt
     1081 cacttttatc cacggcaccc gatggcagga tgaaccgctc gcgcagatca gttacggctc
     1141 gtacgggtat cccaaagaga accgatccaa ggcgtgggag atcttgcgcg accgaggcgc
     1201 tcacgtgtca atcgcggtcc tgatcgagat gcagatgcgg cacgggatgc cgccatttca
     1261 acaggcgctc gatcacggca ttctgcccag tctcagccca gacgttgaca caaacatgac
     1321 cacggatccg ttttcgctaa tgcgcggtac attctgtttg cagcgcgcgc tggcaaacga
     1381 tctcgcattt gcggagagca atccaggcgg tcttccggtg ccacaagccg tcacctcgcg
     1441 acaggtcatc gagatggcca ctattgcggg cgccgcgtcg aaccgccttc tcgacaaggt
     1501 cggaacactc acccctggca aagaggccga tattgtcgtt ctcgacgcgc gcaacatcaa
     1561 cacatggccg atgaacaacg tgccaggtac ggtcgtgacg atgatgaacc ccagacatgt
     1621 acgtgacgtg ttgatcgcag ggaaggtcgt gtactggaag ggcaaactcg tgggttggaa
     1681 tgtcgatgca ttgttgcggc agatcgagca agcacgcgag cgcgttctcg cgcgcatcaa
     1741 cgatacgccg aagatcggac agctgccgca gggcaacaat agcttcgcca atccataccg
     1801 gccgaacttc ctcgccggat gctgcgataa ggggcagaac acgacggcgc ccgcgtacgt
     1861 gttgaggcct tagcggtatg tcctgcccga ctgattactc gcgactgcgt tgtcgcgccc
     1921 ggaaaatcgt ggccgaactt cgttgttgtc actactcttc tggttaataa caaggtcggc
     1981 atcgtcgact actggagtgt gagggaatgg cgtgagttct gccatccctc gcgtgcgaat
     2041 gagccaccgc cagcctcgcc accggcgcaa catttctcag gaagtttcca actcaaatga
     2101 ggctcatgtc cgccgggttt tgcggttcgg ctatctggca ccggatatcg ttggggcgat
     2161 cgccgaaggt cgccagcccc gatgcatgac cgtccagcgg ttgctgtcta gaaatacgtc
     2221 tggttggttg catgccgtcg cgtgcctgcc tatttgtcac gatgatgcca aaaacgagac
     2281 ccgcgacagt tcccgtgggt tctgtcacga gcatgaagtg acccgctccg gagaacagga
     2341 ccagcgtaac ttcacagcgg gcggcagctt ttcgaagtcg aagctctggc cgggcgcgag
     2401 gatcggctcg tgttcctttt cctcctttgg cgcagctgca gcttcaaggc actgcccgca
     2461 gttggagcgc ggagacgccc agtgcgacgt tgacggcaac cgaaccctcc accgagaccg
     2521 gttgtagtgc aaacgagcga gcggagccgc cgaccaggac gttggcgccg acgcccagac
     2581 cgagtccgat gtcacccgag gcgccaacgt attcgccggc gagcgcgccg gcgggcacgc
     2641 cggtcgtcgg cgccaacaca gcccagccga acacgccgcc cgccgagatg ccgatattga
     2701 gcccgatcat attgagcgcg ccctcatagg cctgcagcgg gatcggcgga ttctgagtaa
     2761 agcgacactc catcgactgg tggccggcta tgatgaaacc gatgctcgga ttcaccacgc
     2821 atctcagcac gcccgcctgt gtccatgagg tgggagcctg ggcgtcggca gatgcgccaa
     2881 gcaacccgat cagcgcgagc gccgttacgg tcggatagat tttcaacatt ggatgactcc
     2941 ttacgattgg tgttagtcgc gttctgccgc acgtcagtag caaggcggat atgggtagta
     3001 accgcacgcg ggccgtgcgt atgctccgta ggccgctgcc gcaccatagg ctgccgcacc
     3061 ataggctgca gcgccgtaag cagcacccct atacatggcg ccgcgataag cggttcgacg
     3121 agctacgcct gcatacgata gcggcgtaag tggtctgcca atgatgtcga tgaatacggc
     3181 tgcgccacca tcagcgccgg tcaggtctcc ctccagaata tccacgtcga aggtaagccg
     3241 gtcgccctca agcttcggcg ttttcaagac aacaaccacg tcgcgaatta cagaaccgtt
     3301 cttgctgaaa ccggatactg ttgcgttagg cgggtccttc gcaaagttat cgcttccggt
     3361 cccccaatcc tccacaatat gcgccgtaag gtcatgtcca gcggcgcgaa ctggtcgatc
     3421 ggcaaatacg attgaggtcg gtgatactcc ggtcagcgcc aatttatttc cctgcaagct
     3481 cacgccgctt gaattgagga cgatgagcga gggaacgact tctgtcttgt ccgccccacc
     3541 gatggtcttt tgcagcggta catgcggtgg ggtggcggtg gaagtttgcg ccgcggcaaa
     3601 gcccggcacg caaagtagcg cggcaatagc cataattgat gaggcagtgc ggttgattgt
     3661 catggaagct gctcctttat gctcgacttg atatcgagtt tgtgaggcgg tgaattagcg
     3721 gtagagaggc ggtgattagc ggcagatcgg aaaattcaac ttccgttgca ttttcggtgc
     3781 ccaagatatc agcccccccc cggcaagcca acacgtcatg atccgagatc acccaaatta
     3841 tgatctgccc ggattgtcat cgacgatgcc gtggaggaat tgcgaacggt cgatcacacg
     3901 gttcatgcgt gaaatcggca cggagatcaa cgcagcgacg gcacccagca gaaacgcggg
     3961 cgccgcgacg ctgccgatga tgcgggacaa tcgttcaatc gaaggtgttt cgagcagcat
     4021 gtcgttcaca cggcgaggtt ccgaagacat tattgaagcc gctccacctt cgctgccatg
     4081 tcgggaatga gccttatcct gtaggtcgcg ttcccacatt tgagaaccca gaccgcttcg
     4141 tccggctttg attgcttcgc gtccctaaca gcgctgagcg gcttgtcaca agcactgcct
     4201 tgcatacgta tctgcgccgc gagtgtgtcc ttcggcgctc ctcccgctgc atgtgcggca
     4261 aatcccatca ggtaaccggc cgaactgcca acattcagaa cgaaaacgat agcgaggcca
     4321 acaccaacga acttcaccac gtgtccccct ctcttctccg ctcacgtctt aatctgttga
     4381 tcttttgtca gcggcatctg tcgtgagata gtaccgagga tgagttgcag cgacgcgacc
     4441 gcccctccaa cggacattga gcgaacttcc attcgagggt gtcatcagcg caacaaggtt
     4501 ggcattacac caagagcatg tgtattggac caaagggcaa tatcattgag tgatgtcgtg
     4561 atgatggcgg ctggcaagag gttcaacgtc gtgaccacat ttgataggcc gaacagcatt
     4621 gcgacgctcc cgtcgcgtgt cagcacgccg catgccgtgg tcgacctcgc cggccatgat
     4681 cagtaccggc ggtgcgaccg gtgcgagtgt gtaggggcga atccctgggc catctgctcg
     4741 acaccggcca ccatcggcga gggatgcgcc cgccgagatc accgggcgcc tcaaccgcga
     4801 gattaatgcc cgcctcgccg atcccgccgt gagggggcgg ctcgccgaag cagggacgac
     4861 gccgattgtc atgacacccg ccgccttcgg cgccatgatg gcggccgacg cggcgcggtg
     4921 gggtcatcag attatcgggc agcaagccag aataggaggg tggtccgccg tagcgcgaaa
     4981 cggtaaagtc gggctgccaa gtccaagtaa agaagtagcc tctgccaagc cagaattctg
     5041 acccgacatc gaccacgttc cagctccaac cacacattca gggaggacca ccatgaagcc
     5101 tttcttgctc ggcaccatgc tcgcgaccgt gctgctgacc ggctcaggca ttgcccaaac
     5161 gccctcttgg ctgccgccgg ccgacagcgc acgctgtccg tccaaatggg gcgctggcga
     5221 cgaacgcggc tcagccaacc atatgaaacc tcagagcgtg ctcaatgcca ccaagctggt
     5281 caagaccggc gaggtgatcg aactcagcca tccgctcaac gcccaaatgc cgcttgccgc
     5341 cgggcgggtg tacgacatgc aggtcaagcg aaccgcggag agtaacctcg ccaacaagcg
     5401 ccacggcaat gaagaattga tgatcgccga gatggggcag gtcggcaccc agttcgatgg
     5461 cttcgcgcat cagacccacg acaacgttca ctacaattgc ttcaagaccg ccgagatcgc
     5521 aacccgcaac ggttttacca agctcggcat cgaaaaagtc ggcatgctga tgacccgcgg
     5581 tgtgttaatc gacgtcgccg gctacaaggg cgtccccatg ctgggcgaca cttacgagat
     5641 cacggtagag gatctcgagg gcgccatcaa aaagcaaaac ctgacgttcc agccgggcga
     5701 cgccatcatt attcacaccg gttggggcaa gctctggtac acggacgcgg cgcgctacgc
     5761 taaaggcaac cctggcctcg gcgtcaaggc gtccgaattc ctgatcgcca aggatccgat
     5821 gctgcttggc gccgataccg ccccggtcga ggtcaatccc aatccggaca agctgatctc
     5881 gctgccgctg caccagatcg cgctggtcat caacggcgtg catctgctgg agaacctcaa
     5941 gctcgatgag cttgccgcca agaacgtctc cgaattcgcc tttgtgatgc aaccgctcaa
     6001 gttccagggc gccaccggat cgtccgtcgc gccggccgcg atacggtgag gcgaaaagcg
     6061 ccaagaacgg taggggtggg caaaaggcgc gtggcacggg gtgaccggtt acgtccgcct
     6121 tcgcgcgccg tgcccaccat cggcgccgcg gtgggcacgc gcgaaaagtc ttttggtaac
     6181 caacgaggct gtaccaggcg cctttgccca cccgaccaac gaggagattg aatatggtca
     6241 cagttcgtga accggtctta cataccgtcc ccatcaccga gctgcggccg acccagatca
     6301 cggtcggcat gcgggaggtc catgccaagc agaagagctg gcagcagcag ggcaaaaaaa
     6361 agcgggccga attcctcggc cggcacatga ttccggtcat tcgcggaccc agagatcgcc
     6421 tatatgtgat tgaccatca
//
LOCUS       DATILV010000821         4708 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_971787, whole genome shotgun sequence.
ACCESSION   DATILV010000821 DATILV010000000
VERSION     DATILV010000821.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4708)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4708)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4708
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_971787"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..934)
                     /locus_tag="VLJ17_19955"
     CDS             complement(<1..934)
                     /locus_tag="VLJ17_19955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008973058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HSV25290.1"
                     /translation="MGKRVADVLVETLQAAGVKTCYGIVGDTMNRIAHAIDHSEIDWV
                     HVRHEEAGAFAAAAEGLLSGRLTACAGTCGPGSLHFINGLYEANRNRAPVILIATQIV
                     RQDLGFESIQEVDFDDVFKGCSVFCEMIVTPEQARRKTVAACQAALTKRGVAVLVVPA
                     DVANAASHDEPPYAVHVRHPVIRPSDTDLDEIAAILNKSEAITIYAGAGCAGAHDEVV
                     ATAARLKAPMAHTSRGKDFLEYDNPYNVGMTGIIGGPAGYHAILDCDVLLLLGADFAW
                     GQFYPNKATIIQIDIDPTHIGRRHPVAIGAVGNIK"
     gene            complement(1244..1696)
                     /locus_tag="VLJ17_19960"
     CDS             complement(1244..1696)
                     /locus_tag="VLJ17_19960"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014439454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HSV25291.1"
                     /translation="MASMSGLDFVRAIFARRLPEPPIMQTVEPFDCTAESGVVVIHSV
                     PGLRHYNPIGSVHGGYAAILLDSAMGLAVQSTLPAGTGYTTLEFKISLVRGMSDASGV
                     VRTEGRVLNAGRRVATAEARITDAKGRLIAHATTTCLVFEIAKANAKG"
     gene            complement(2206..2832)
                     /locus_tag="VLJ17_19965"
     CDS             complement(2206..2832)
                     /locus_tag="VLJ17_19965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV25292.1"
                     /translation="MSDANSTVLVIDDDPDVRASIGRLLRSLGVNVQLFASISEFLKS
                     DPPDGPTCLVLDVRLPGQSGLDLQRELARAKRQFPIVFITGHGDIPMSVQAMKGGAIE
                     FLTKPFRDQDLLDAIQLGLSRDRARQENEEALADLRERFASLSPREREIVIQVARGRL
                     SKQIAHDIGIAEATVKVHRSRAMQKMKAGSLPELGRMADKLKLVHSDL"
     gene            3155..3547
                     /locus_tag="VLJ17_19970"
     CDS             3155..3547
                     /locus_tag="VLJ17_19970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007800378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV25293.1"
                     /translation="MTKNQLVLVIDDDRFFRESMARLMRSFGYTVEAFASAADFLVSP
                     RLVETACLIADVHMPGMTGIELHRHLIDLGHAIPTILVTAYPNDVDRARALNEGVVCY
                     LRKPVDEQDLIRCLRAALASGEPTEEDP"
     gene            complement(3489..>4708)
                     /locus_tag="VLJ17_19975"
     CDS             complement(3489..>4708)
                     /locus_tag="VLJ17_19975"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV25294.1"
                     /translation="LGEANDRAQRKRAEEALRRSEMYLAEAQRSSHTGTCVFDATTML
                     YIYWSNECYRIWGLDPVQGIPSRETVWQRVHPADQGRVWEGIEEALRHKKDYAAEFKI
                     VLPDGTVKYLASTMHHLFSAGGEIVEVIGTHVDVTERKRAEQQSERLHQLEGDLARIN
                     RVSMMGELAASLAHEIKHPIACMAADATAVLSWLRREPPEIAEACESASHIIDSADRL
                     THIVDRNGALYSRETRQRELIDVNEIIREMAVLLRDTAHHHSISIRSELDPALPATSA
                     DRVQLQQVLINLMLNGIEAMKQESGELIVASTRMEDAKLLVAVSDFGIGLPEAGPERI
                     FEAFFTTKPDGTGMGLSISRRIIEAHGGSLWADANEPRGAVFRFTLPGVESQLTDPLQ
                     SVHRTREPREDIV"
BASE COUNT          941 a         1434 c         1343 g          990 t
ORIGIN      
        1 ccttgatatt gccgactgcg ccgattgcga caggatggcg tcgtcctatg tgcgtgggat
       61 cgatatcgat ctggatgatc gtcgccttgt ttggatagaa ctggccccag gcgaagtcgg
      121 ctccgagcag gagcagcaca tcacagtcga ggatcgcgtg atagcccgcg ggcccgccaa
      181 tgatgccagt catgcccacg ttgtacggat tatcgtattc aaggaagtcc ttgccacgag
      241 acgtgtgggc catgggcgcc ttcaaccgcg ccgcagtggc gaccacctcg tcatgtgcac
      301 cggcgcagcc ggcgccggca tagatcgtga tcgcttcact cttgttgaga atggcggcga
      361 tctcatcgag gtccgtgtca ctcgggcgaa tgaccgggtg ccgtacatga acggcatacg
      421 ggggttcgtc gtgcgaggcg gcgttggcga catccgccgg cacgaccaga accgcgacac
      481 cgcgtttcgt caaggctgcc tggcaggccg cgactgtctt gcgccgggcc tgctccggcg
      541 taacaatcat ctcacaaaag acactgcagc ccttgaagac gtcgtcaaaa tcgacctctt
      601 ggatcgattc gaacccgagg tcctgccgca cgatctgggt tgcgattagg atgactggcg
      661 cacgattgcg attggcttcg taaagaccgt tgatgaagtg gaggctgccg ggaccgcagg
      721 ttcccgcgca ggccgtgagc cggccgctga gcaacccctc ggcagccgcc gcgaaggccc
      781 ccgcctcttc atggcgcaca tggacccagt cgatctcgct gtggtcgatg gcgtgagcga
      841 tccgattcat cgtatcgcca acgataccgt agcacgtttt caccccggct gcttgcagcg
      901 tttcgaccag tacatcggcc actcgtttgc ccataacgga aacctcacgt gtcggtttgg
      961 cagatcgacg catgtgatga gatgccgatc ggccgaaatc ctgatgaggt gcagttagcg
     1021 gatttggatt tcttcgatct atcgcacatt ggttgtgcgg cgatatcatt atagtttcgg
     1081 gaccctgaac attggtttac gggcgcctgc atgcccaaac aggccggcga ctggccggtg
     1141 tcgaaatcct gctaaggcgt ggcgaggacc gtgatgttcc cctcgcagca gacgcgagcc
     1201 gccgagatcg ggggcctacg acaaccgcga ctataactca acgtcagcct ttcgcgttcg
     1261 ccttcgcaat ctcgaacaca aggcacgtcg tcgtcgcgtg cgcaatcagc cggccttttg
     1321 catcggtgat gcgcgcttcg gcggtggcga cgcggcggcc ggcgttgagc acgcggccct
     1381 cggtgcggac cacgccgctc gcgtcgctca tgccgcgcac taacgagatc ttgaattcca
     1441 gcgtggtgta gccagtgccc gcgggtaacg tgctctgcac cgcgagcccc atcgcggaat
     1501 ccaagaggat cgcggcatag ccgccatgca ccgagccgat tggattgtaa tggcgcagac
     1561 ctggcacgct gtggatcacc acgacgccgg attccgccgt gcagtcgaac ggctcgaccg
     1621 tctgcatgat cggcggctcc ggcaatcgtc tcgcgaagat cgctcggaca aaatcgagcc
     1681 ccgacatcga tgccatcacg tcgacgggca caacgccgta ttcgattgtc tgctcgccgg
     1741 acgtatcgtt cacgatctct cgccatacca cgtcgtcatg ctcggacgtg atctgacgtg
     1801 atccgggcat ccatcattct tcagaaagat ggattgtcgg gtcaagccag gtcaagccca
     1861 gcaatgacgg atgcaagtaa accaaggttc aaccgttgca accatgtcgt cattccatac
     1921 gacgtgcgcg tgcaacagat taccggagcg aaaaacggcc ttccaactgg cgacgtcgcg
     1981 tccgcgggct ctgaagaatc gggtccattg cgtgcgcccg cacccacggg ctttttctcc
     2041 gcgggtgtgt agcggaggca aggagattgc ccagaccctc gcgataacgt ctgaaacggt
     2101 gaagtcacac gtaaagcaca ttttcatcga cctgagcgtt taaaagcgcc caggtggtct
     2161 atgaatgcag gtcgttgggc tagtggaaag cttaaaccag tgtactcata aatcgctgtg
     2221 caccagtttg agcttatcgg ccattcggcc gagctcggga agcgagccgg ccttcatctt
     2281 ctgcatcgcc ctgctgcgat gcaccttcac ggtggcttcg gcgatgccaa tatcgtgagc
     2341 aatctgcttg ctaaggcggc cgcgtgccac ctgaatcacg atctcgcgct ccctcgggct
     2401 tagcgaggca aagcgctccc ggaggtccgc taaggcctct tcattttcct gtcgcgcacg
     2461 gtcgcgcgaa aggccgagct gaatggcatc aaggaggtcc tgatcgcgaa atggcttggt
     2521 cagaaactcg atagcgcccc ccttcatcgc ttgcaccgac atcgggatat cgccgtgccc
     2581 tgtgatgaag acgatcggga attgcctttt tgcccgagcg agctcccgtt gtagatcaag
     2641 gccactttgc cccggcagtc tgacatcgag caccaggcag gtgggaccat cgggtggatc
     2701 agacttgagg aactcggaaa tggacgcaaa tagctgaaca ttgacgccga gcgatcgcaa
     2761 gagacgcccg atcgaggctc gaacgtcggg atcgtcgtcg ataaccaaca cggtggagtt
     2821 tgcgtcagac atcgctgcta ctcggattaa aggaatcacg ggaatgaagc ctttgtctcg
     2881 gttcgcaggt ttggcccagc cgtacagtaa tcccagtccc tccacctgaa cagccccttt
     2941 cttccttaga ggacacgtgc ggcgtagacc aaagtctatg cgcactgaca ccgttcggca
     3001 gcatcccttt ggcgcccagc ctgcacaatt ctcgccctat gataagccaa agtttaccgg
     3061 gcaacggcta ttgcatggtg acaatctccg cgcaaatcac atagtcagat gcggagcaac
     3121 gcaaggcggg ttaaagccca ctgccagagg tgaaatgacg aaaaaccagc tggttttggt
     3181 cattgatgac gatcggttct ttcgcgagtc catggcaaga ctcatgaggt cgttcggcta
     3241 taccgtcgag gcttttgcat cggcggccga tttcctcgta tcccctcgtc tcgtcgaaac
     3301 ggcctgcttg atcgccgacg tccacatgcc tgggatgacc gggatcgaac tgcaccgcca
     3361 cctcattgat ttaggacacg cgattccgac aattctcgtg actgcctacc ccaatgacgt
     3421 cgaccgggcc cgcgccctga acgaaggggt cgtctgttac cttcgtaagc cagtggatga
     3481 acaggatctc atacgatgtc ttcgcgcggc tctcgcgtcc ggtgaaccga ctgaagagga
     3541 tccgtgagct ggctttccac gccgggcagg gtgaaccgaa acacggcgcc tcgcggttca
     3601 tttgcatccg cccacaaact gcccccatgg gcctcgatga tcctgcggct gatggacaac
     3661 cccatcccgg ttccatccgg cttggtggtg aaaaaggcct cgaagatgcg ctcaggtcca
     3721 gcttccggaa gcccaatccc gaaatcactc acggcaacca gcaacttggc gtcctccatc
     3781 cgggtcgaag caacgatcag ctcgccgctt tcctgcttca tggcctcgat gccattgagc
     3841 atgaggttta tcaaaacctg ttgcaactgc acccgatcgg cgctcgttgc cggaagtgcc
     3901 gggtcgagtt cactgcggat cgaaatggaa tgatgatgcg cagtatcgcg caacagaacg
     3961 gccatttcgc ggatgatttc gtttacatca atcaactccc gctgcctcgt ctcgcggctg
     4021 tagagagcac cgttgcggtc gacgatatgg gttaggcggt ccgcgctgtc gatgatgtgg
     4081 gatgcgctct cgcaagcttc tgcgatctca ggcggctcgc gtcgcagcca gctcaacact
     4141 gccgttgcgt ctgccgccat acacgcaatc gggtgcttga tctcgtgagc cagcgatgcg
     4201 gccagctcgc ccatcatgct cacgcgattg atacgcgcca ggtctccttc caactggtgc
     4261 agccgctcgc tctgttgttc ggcgcgcttg cgctcggtca catcgacgtg cgtgccgata
     4321 acctcgacga tctctccgcc cgcggagaat agatgatgca tagttgatgc cagatatttg
     4381 actgtcccat cggggagtac gattttgaac tcggccgcat aatccttttt gtgacgcaat
     4441 gcctcctcga tcccttccca taccctgcct tgatcggctg ggtggacccg ttgccacaca
     4501 gtttcgcggc tcggaatgcc ctgaactgga tcaagccccc agatccggta acactcgttc
     4561 gaccaataga tataaagcat cgttgtagca tcgaaaacgc aggtaccggt gtgactcgat
     4621 ctctgcgcct cggcgagata catctcgctc cgtcgcagcg cctcctctgc ccgcttgcgt
     4681 tgagcccggt cgttggcctc tcccagcg
//
LOCUS       DATILV010000822         6075 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_197549, whole genome shotgun sequence.
ACCESSION   DATILV010000822 DATILV010000000
VERSION     DATILV010000822.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6075
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197549"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(356..1417)
                     /locus_tag="VLJ17_19980"
     CDS             complement(356..1417)
                     /locus_tag="VLJ17_19980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018324356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSV25295.1"
                     /translation="MQNKAVIVGALGVIGRYIVERLVQDPDWQVVGLSRRLTTDRPRY
                     RHVAVDLLDAEDTKRKLAELTDVTHVFYAAFQAAPGSASNFASNTDHNRDMLVNSVTA
                     ITRTAPHLKRVVLVTGTKYYGVHLGPLKTPMRETDPRHMPPDYYFDQIDWLAAYQRGK
                     GWDWVELRPQTLCGFAPGSPMSILPAIAVYAAISKELGLPLRFPGKPGAYGTIYQVTE
                     STHFANAALWAATDERCGNQAFNITNGDYFRWRNLWPNIAAIFEMSVADPQTICLTQH
                     MADKGPLWAKMTAKYELKRVPYADLVAWPFADYVFGADWDVMSDVTKSRLYGFHDVVD
                     SEAMFARLLRRFRDERIVP"
     gene            1887..2009
                     /locus_tag="VLJ17_19985"
     CDS             1887..2009
                     /locus_tag="VLJ17_19985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25296.1"
                     /translation="MKTPDVARALSGAVNPAPEAPARGGPNTHAVRATKAFFAN"
     gene            2357..2611
                     /locus_tag="VLJ17_19990"
     CDS             2357..2611
                     /locus_tag="VLJ17_19990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25297.1"
                     /translation="MKLSIALAALLITGFLTASTEEASAVVYCQYVDYPAGCIVRAGV
                     ALRPRPVARAVTPGVGAPGVGVRPGTPTNRGGPVDRAGTR"
     gene            complement(2742..2832)
                     /locus_tag="VLJ17_19995"
                     /pseudo
     CDS             complement(2742..2832)
                     /locus_tag="VLJ17_19995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015821267.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
     gene            2962..3516
                     /locus_tag="VLJ17_20000"
     CDS             2962..3516
                     /locus_tag="VLJ17_20000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25298.1"
                     /translation="MAEPDHHGISARLWGLPGQLLLALINATAILVIVAAILALVSIA
                     RIEHFAGNIVAMMTDAVLSKVDLPSRDVLANIRELTEEVRALGNALRDIKAVENPVLQ
                     SEIARVKESLIALSISVDRLRSSRSILTDEVAARFGDTITQTLMKLRDCSSNIGANGA
                     SPLSKRKHWVASQSFNATQKWSSW"
     gene            3632..4348
                     /locus_tag="VLJ17_20005"
     CDS             3632..4348
                     /locus_tag="VLJ17_20005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25299.1"
                     /translation="MSQPTFAPPAPTPFLRRAFDWWLEQVKHALPPTIFFFVGFNLIL
                     WTKRLILEEQGVEFSGFFTATVAALLVGKAVLLTDNLPFMRRFDGAPMIQPILFKSAI
                     YWLCVLIVRLAEGLVHFLAAGGAIADFPEHVVQHFSWPRFLSIQIWLMVLFLAYVTIH
                     ELNLLFGDGELFRLFFRWRSSEAKLTRRQRIRLLTRLNRLTEATPIEAFSERTSPVHA
                     ELVDILRQLASPPVATSARV"
     gene            5285..5608
                     /locus_tag="VLJ17_20010"
     CDS             5285..5608
                     /locus_tag="VLJ17_20010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017988558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HSV25300.1"
                     /translation="MPNAHDVLFRTLADPTRRALFERLCREGEQTVGALTARAGVSQP
                     AVSKHLGVLKQAGLVRDRHEGRQTHYSAQLGALTPLIDWTSQMAGFWQSRFDHLEDLL
                     KRMDQ"
     gene            5605..6015
                     /locus_tag="VLJ17_20015"
     CDS             5605..6015
                     /locus_tag="VLJ17_20015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018242336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HSV25301.1"
                     /translation="MTNTATETLSVIVEREIPFPPEKIWRALTQPHLIEEWLMKNDFK
                     PVVDHRFNLRADWGAVDCQVLAVEPNKTLSYTWAAYGLESVVTWTLTPTSTGTHLRME
                     QSGFRPDQQQAYQGAKGGWQQFFAALEQVLARVD"
BASE COUNT         1235 a         1755 c         1824 g         1261 t
ORIGIN      
        1 ccgtggatgc gttcaaaaaa aatttgccac ccgcgtggcg gaagtccgcg cgaggctcgc
       61 gcccgggacg ccggtagaga tttggttcca gatgctatga ggacgggtcg agccgatact
      121 ttgacggcgc cgactcaaag cgatggagct gcaccataca accgatcgac accaataatc
      181 ctacgatcct ccttgctatc gaactcaggg tatcaacgtg gctcgtcgcc gcccgggtgc
      241 ccgggtctga gaagctacac ctgcatcgga tcgatggcgg cgacacggcc gccttgctcg
      301 ctctctagat gattacggtg gcacggtacg tacacgtgag tgcgcgtagc cgacgctaag
      361 gaacaatccg ctcatcacga aagcggcgga gcaggcgcgc aaacatcgct tcgctatcga
      421 ccacatcatg gaagccgtaa agccgagact tggttacgtc cgacatgacg tcccagtcag
      481 cgccaaagac ataatccgca aatggccaag cgacgagatc cgcgtagggg acgcgcttga
      541 gctcgtactt ggcggtcatt ttcgcccaga gtggaccctt atcggccata tgctgcgtga
      601 ggcaaattgt ttgcggatct gcaaccgaca tttcgaagat cgctgcaata ttgggccaaa
      661 ggttccgcca tcggaaatag tcgccattag tgatgttgaa ggcttgattt ccacagcgct
      721 catccgttgc agcccacaac gctgcattcg caaaatgggt tgactcagtc acctgataga
      781 tcgtgccgta ggcaccaggc ttgcccggaa agcgcagcgg caatccaagt tctttcgata
      841 tcgcagcgta gaccgcgatt gccggaagga tgctcattgg cgagcctggt gcgaagccac
      901 agagcgtctg ggggcggagc tccacccaat cccacccctt tcctcgctgg taggccgcga
      961 gccagtcgat ctgatcgaag taataatcgg gcggcatatg gcgcggatcg gtttcccgca
     1021 tcggcgtttt cagcggccca aggtgcacgc cgtagtattt ggtgccggtg acaagcacga
     1081 cgcgctttag atgaggcgcg gttcgagtta tggcggtgac cgagttcacc aacatgtcac
     1141 gattgtggtc cgtattagag gcaaagttcg atgcgctgcc gggagcggct tggaatgcgg
     1201 catagaagac gtgtgtaacg tccgtgagtt cggcgagctt gcgtttcgtg tcttcggcgt
     1261 caagtagatc gacagcgaca tgccggtagc gtggcctatc cgtcgtcagt cttcgcgaca
     1321 ggcccaccac ttgccaatcg ggatcttgga cgagcctctc gacgatgtag cgcccaatga
     1381 caccgagcgc accgacaata accgccttat tctgcatact ttgtcttact gggccgaacg
     1441 cgaggccgtc ctaacgaccg gcgttttgaa ttacttccat tgttttattg cagtttcgac
     1501 ccgtatggtc aaaaaattga atctgtagaa aacaggggag ctgccgctcc cagcctcgcc
     1561 tggtcggcgc ctgctaatta gtttgtgggg gaggggctga taggggatcg gctggcgtag
     1621 aggacgaatg aatggggcgc gcatcctggc ctatgtcact gggacggtgg accaggagct
     1681 gctgctgcgg aatgaatatc tagctgccga aaaccggatc ctgcagttga aagggcgtct
     1741 gcagcgctcg aacgcggagc gagccaagct cggcgagatt gctcatcgag tgggccgcag
     1801 ggtcctcggc aaagtggcga atgcggccca ttgggcatct aacaaatccg gctcagcgcc
     1861 gggcggtttc agttggcgag ttgaccgtga agacgcccga cgttgcgcgg gcgctctccg
     1921 gtgccgtgaa tccggccccg gaagcgcccg cgagaggggg gcccaatacc catgcggttc
     1981 gcgcgaccaa ggcatttttc gcgaactgag ccaaccgagc cgacgaagtc cgcttacaat
     2041 ggattgttgt atcgtgcggg cggcaacgcg attgccccgc agcgacattt gctcgctgat
     2101 ttgcagttag ggcgcacggt gtgcaactgg cgtgcgcccg tcaagcgacg ggttgatctg
     2161 cgaacaattg gctcagcgga cggccacggt tgccaccgct gaaccacttc ctgatctgga
     2221 tcaaagcaga ccaatatggc tgggagtacg caatgttcag acaggctgat gcgtcagaca
     2281 ggctgatgcg tttgacctgc gtcgatgcgc agatcgttct atgggaaatc atttgggggc
     2341 gtagtaggag gcgaaaatga agttgtcgat cgcgctagct gcgctgctga taactgggtt
     2401 cctaaccgca agcactgagg aggccagtgc tgtggtgtat tgccaatacg tggactatcc
     2461 cgccggttgc atcgtaaggg ccggcgtggc gctgcggcca cggccggttg cgcgagccgt
     2521 gacccccggc gtcggtgctc cgggtgttgg agtacggcct ggaacaccga cgaatcgtgg
     2581 cggtccggtt gatcgcgccg gcacgcgctg aggtagactt gcccgtgccg acgaggtgat
     2641 cgaaggcgga cgatgtcgac tataggcagg aatctgccat ggcgggatcg gcagagcagc
     2701 tcccctctgc cccggtggta ctgcagacgt ccacttgttc cgacctcgat gccaagatac
     2761 ctgactgtgc tttcgatctt cgtgtggcca agcaggagct gcacgggctg gcagattgcc
     2821 ggtacgccgg tacgctttgg ctcgccgcat gttgcgaaag ggcccgagcg tggccaaacc
     2881 ttcgcgcaca tatgtggcgc gctgtcggat cgaccgcgac gtgggcttct tcgtcagcat
     2941 aagggacgat aggacgcaac catggccgag cccgatcacc atgggatttc cgcgcggctg
     3001 tggggactcc ctggccagtt gttgctggcg ctgatcaatg ccacagcgat cctggtgatc
     3061 gtcgccgcga tccttgcact cgtctcgatt gcacgcatcg agcattttgc cgggaacatc
     3121 gttgcgatga tgactgacgc cgtactgtcc aaggttgatc tgccatcgag agacgtgctg
     3181 gcgaatatcc gagaattgac cgaggaagtc cgcgcgcttg gtaacgccct ccgggacatc
     3241 aaggcagtag aaaacccagt cctccaatca gagatcgcgc gagtgaagga gtcactgatc
     3301 gccctaagta tcagcgtcga tcggcttcga agctcgagat cgatcctcac cgacgaagtg
     3361 gctgcgcgct ttggcgatac gatcacccaa acactgatga agttaaggga ttgctcttcc
     3421 aacattggcg caaatggcgc ctcaccgctg tcaaagcgga agcattgggt cgcaagccaa
     3481 agcttcaacg cgacgcaaaa gtggtcgtca tggtaattgt tgtcgcgatc gtcggattga
     3541 tcatacgcat accgctttct cgtgcgttgc caatcgttga gccagcacgg catttgttac
     3601 gctatggctc aataatcctt gggggtaccg tatgagccag cccacttttg ctccgcctgc
     3661 gccgacgccg ttcctacgcc gggccttcga ttggtggctc gaacaggtga agcatgcgct
     3721 accaccaaca atcttcttct tcgtcggctt caatctgatc ttgtggacca agcgcctgat
     3781 tctggaagag caaggcgttg agttcagtgg ttttttcact gcgacggtag ctgcattgct
     3841 ggtcggaaaa gcggtcctgc taactgacaa cctccccttt atgcgccgct tcgacggcgc
     3901 gccaatgatc cagcccatct tgttcaagag tgccatctac tggctgtgcg tactgatcgt
     3961 gcggctcgcc gaggggctcg tccatttcct cgctgccggc ggcgcgatcg ccgatttccc
     4021 ggagcacgtt gtccagcact tttcttggcc acgctttttg tcgattcaga tatggctaat
     4081 ggtgctattc cttgcctacg tcacgataca tgaactcaac ttactctttg gcgacggcga
     4141 actctttcgc ctgttcttcc gatggcgctc gtccgaggcc aagcttaccc gccgtcaacg
     4201 cattcgcctg ctcacccggc tcaaccgact caccgaggct accccgattg aggcctttag
     4261 cgaacggact tcaccagtgc acgctgagct ggtcgacatc ctgcgccaac tcgcttcgcc
     4321 gcccgtcgcg acgtcggcgc gcgtttgact cacagagtgg tttgcgccat ccaccactac
     4381 ggccaagagc gcagcttctt tcagcacgcg cggttggcgt gcgccgtgaa aaggcggtgc
     4441 tttccacgca tgctcgcggg ttaacgccgc gagcgccgca cgcacaaggt ggacaaggca
     4501 caacgccaag gttcgtcgag gcgcgccgaa gcccaagtca ggtatttgtc aatggaacag
     4561 gggcgatggc gtacgtgccg cacaatcgtt tcgccataag ggcggcgatc tcgccaagcc
     4621 caacgctcga tgttctgtaa tcatgcagat catgcgagat ttattgggtt tggccactcc
     4681 tacttcgacg gcggccacta cgtcgtcacg cgagatcggt gcaacgcgac catgtcctgt
     4741 gggtagcaca agctctcccg acgtttagct cggcataagc caatggaata aagtcggaat
     4801 ataggccaca tctgcggatg gtcgaaggca cactgcaaac cgctagtcgg cgctctgcgt
     4861 ctcggtaaac aggtgagaag tggaaatggc gacaactcgt cgtgaaagta atatgccgga
     4921 tgttggtcgc cgtagctgcc tcgatggcgt tggcgtggtg gcgcatgact gcgctcgcgt
     4981 cgccatcgct agaaatggga ccatatcatc gatgcccgca agtgccctct gcagagcaga
     5041 ggcatcctcg tagtccgcaa tgcgcagggc gattgcggat ggctggcgcc tgcttgcggc
     5101 ttggacgtcc cggaccattg cgaccacgtc gtggccgagt gacgccaacc tgcagacgac
     5161 gacgcgccca catggccggt ggctcttgtg acaaggatca ttgtgccgct ccacgttccc
     5221 gcttgactca catatatctc agtggttata cgtcaatcaa tagccagtag gttatcgatc
     5281 caaaatgccg aacgctcacg atgtgctctt cagaaccctc gccgatccga ctcggcgggc
     5341 tctcttcgaa cgactgtgcc gcgaaggaga gcagacggtc ggggctctga cggctcgggc
     5401 cggggtctcg caaccggccg tctcaaagca tcttggggtc ctgaagcagg ccgggctggt
     5461 gcgcgaccgc cacgaaggtc gccagacgca ctatagcgcg cagctcggcg ccttgacccc
     5521 gctgatcgac tggacaagcc aaatggccgg gttctggcaa agccgattcg accacctcga
     5581 agatctgctc aaaaggatgg accaatgacc aataccgcga ccgaaacgct ttccgtcatc
     5641 gtcgaacgag aaatcccttt tccgccggaa aagatctggc gcgcgctcac gcaaccacac
     5701 ctgatcgagg agtggctgat gaagaatgac ttcaagcctg tcgtggacca ccgtttcaat
     5761 cttcgcgcag actggggcgc tgttgactgt caggtcctgg cagtcgagcc gaacaaaacg
     5821 ctgtcttaca cgtgggcggc ctatggtctc gagagtgtcg tcacttggac tctcaccccc
     5881 acgagcacgg ggacccacct gcgcatggag cagtcgggct tccggccgga tcaacagcag
     5941 gcctaccagg gcgccaaggg cgggtggcag cagttctttg cggcgctgga gcaggtattg
     6001 gcgcgggtag attgaagtct gccgccacaa ttcaaagcta ggccctgtta cagagttgcg
     6061 taccgtaggc atctg
//
LOCUS       DATILV010000823         4207 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1223021, whole genome shotgun sequence.
ACCESSION   DATILV010000823 DATILV010000000
VERSION     DATILV010000823.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4207
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1223021"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..203)
                     /locus_tag="VLJ17_20020"
                     /pseudo
     CDS             complement(1..203)
                     /locus_tag="VLJ17_20020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007605944.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            970..1278
                     /locus_tag="VLJ17_20025"
     CDS             970..1278
                     /locus_tag="VLJ17_20025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25302.1"
                     /translation="MTDFEDRPPPAVGAYWVKEEDYPALLKLSDDGNKMPRTWKEWLK
                     MAEEMERGLKAYGHVVMRVHIDPNTFPDWCAAHGTSPGREGRKRFVAAAVAERYGNQT
                     "
     gene            complement(1641..2741)
                     /gene="dinB"
                     /locus_tag="VLJ17_20030"
     CDS             complement(1641..2741)
                     /gene="dinB"
                     /locus_tag="VLJ17_20030"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016917972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HSV25303.1"
                     /translation="MRTQETAAGPTRPRKIIHIDMDAFYASVEQRDNPELRGKPIAVG
                     GSRERGVVAAASYEARKFGVRSAMPSVTAKRQCPDLIFVKPRFEAYKVVSLQIREIFA
                     EHTQLIEPLSLDEAYLDVTDNLQGIATATEIAMAIRAEIRTETSLTASAGVSYNKFLA
                     KLASDHRKPDGLFVITPKMGPAFVENLPVGKFHGVGPATTAKMNRLGIETGLDLRAQS
                     MPFLQQHFGKAGPYYYWIARGVDDRPVRADRIRKSIGAENTFSADLFTFEAAREALVP
                     IIDKVWRHCESAGTRGRTVTLKIKYADFQQITRSLSLPRMIEERTALERVSLDLLRGQ
                     FPITKGVRLLGISLSAFAPAGLMDAEQLPLGI"
     gene            complement(2789..3454)
                     /locus_tag="VLJ17_20035"
     CDS             complement(2789..3454)
                     /locus_tag="VLJ17_20035"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014492137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA];
                     GO_process: GO:0018142 - protein-DNA covalent
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SOS response-associated peptidase"
                     /protein_id="HSV25304.1"
                     /translation="MCNLYSLTKSQQAIRELARAMSDRTGNLPLMPGVYPDYRAPIVR
                     NQQEGRELTMARWGMPSPRTALKTRNADTGVTNIRNVKSPHWRRWLGIEHRCVVPFTS
                     FSENEALPDGRKPPVWFAFDETRPLAFFAGLWTNWTSVRKVKEGATTNDLFGFLTTDP
                     NKEVGAIHPKAMPVILTTPEEIDLWMTASTEDALKLQRPLADGALRIVARGEKEDLGG
                     LTV"
     gene            complement(3460..>4207)
                     /locus_tag="VLJ17_20040"
     CDS             complement(3460..>4207)
                     /locus_tag="VLJ17_20040"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018858562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HSV25305.1"
                     /translation="SSAQRVLDLMAGKADPLSALSDIPAPPRSGEDWLAFVKTLQQLH
                     TGGAGWPAEIEYARRWYEPHLERIHEDASLRQADLVQLEQIAAGYPSRERFLTELTLD
                     PPDATSDQAGVPLLDEDYLILSTIHSAKGQEWKSVFVLNVVDGCIPSDLGVGTTAEIE
                     EERRLLYVAMTRAKDSLHLVIPHRFFTHGQNAQGDRHVYASRTRFIPAALMQHFECVT
                     WPLATVAAGERLDAKHVRVDVGAKMRRMWR"
BASE COUNT          807 a         1226 c         1322 g          852 t
ORIGIN      
        1 gtcgttgaag tggagaccgt ccgagaaggc gaccttgggt ccagcccgca gcagcacctc
       61 ggtttcggcc ggcgcttggc ggcgagaaag tcgcggctgt cgatcatcgc ggcggtcaat
      121 gtgcgatggt tgaccattga cccggcgcgc ggacgccagg atgaaccggt gtggcgttcg
      181 aacagatcgg tggcctggtc gcgccgctga ggtcgcccgt gctgtagccg atgtgttttc
      241 ggggcgtgcc cctgtgcgcg cccgtgcatg gtgccacacg cgtctcagcc cagacaacgt
      301 cgttcggatt gatctcagac gatccacagt atgtccgcgg tggtgaccgc ttgcgcaaaa
      361 tgcgacaatc gtggtcccct tcgtaagatg gtgcgcgtga gttagcttcg tcgtaccggg
      421 gggaatgatg acgggccgcg gcaaatggct accgtcgcgg agcagcggtt tcgtgttagg
      481 ttacgcgcct tcagccgatg gtttcggcga caggatgtgg gcaaatgccc ataagcgagg
      541 ctgcaacatc tgctgcggct attcaccgga aattgcgaag tcttgccgcg gtgttcgcag
      601 acccagccgc aaatgaacac gagaaggcca atgcaaagga actcaaggga cgcctggaaa
      661 agcagctcgg tgacgaagca cccgacgggg cgtggactgg cattgtgcgg ttgggccagg
      721 gtgttaaaga gatgagatcg ccgacgtctc caaagaccga ttggacacat catgcgtttc
      781 gacttggcag aatgttccgc agaggtttca agaggtggcg acaaagtaag agggggcagc
      841 cgggttactc ggcctcaatt gccacgctct gcgtgatatt ccgcttgccc ctcggttgac
      901 cgtcaaagcc gacaattctg tacttcactt ttttcgccgg caacaagcaa catttgcggg
      961 atgacaatca tgactgactt tgaggaccgg ccgcctccag cggttggagc ttattgggtc
     1021 aaagaggaag actatccggc tctgctgaaa ctttccgacg atggcaacaa gatgccacgg
     1081 acctggaaag agtggctgaa gatggccgag gaaatggaac ggggactcaa ggcttatggt
     1141 cacgtcgtta tgcgtgttca tatcgacccc aacacatttc cggactggtg cgccgcccat
     1201 ggcacgagcc cgggccgtga gggacgcaag agattcgtcg ctgcagcagt agccgagaga
     1261 tacggcaatc aaacctgatc aatgggcatt ttgccctcgg gtctggttaa cgtggtggtc
     1321 gattccgggg tcacgaggac ggattgccgg tgtcagagat gtgtccggtg tccccctatc
     1381 gcttcagaat ggcgcggtgc atgaccaaca aaatgggcca cttcctgaaa ttagccgaca
     1441 ggcgggcgct ggatgagggc gaagagggta gctgacaggg gctctttgcg ctgttgatcg
     1501 gacgcgacca atcagcccaa aggcaccgtt tcacgaccaa ttctgcatct gagcaggtcg
     1561 acatgttcac atctcggccg cggcccgcta atgcgaaggc cgccgttgtt ggcgcagatg
     1621 cgctgaccga tacgtccctc tcaaataccg agcggaagtt gttccgcgtc catcaatccg
     1681 gccggtgcga atgcagacaa cgagatgcca aggagccgga cacccttcgt gattggaaac
     1741 tgccctctga gtaaatccag ggagacccgc tccagcgcgg tgcgctcttc aatcatcctg
     1801 ggcaatgaca ggctgcgcgt gatttgctgg aagtccgcat atttgatttt cagtgtcacg
     1861 gtgcgaccgc gtgttcccgc actctcgcag tgccgccaga ctttatcgat gattggtacg
     1921 agcgcctccc gcgctgcctc gaaggtaaag agatcagcgg aaaacgtgtt ctcggcaccg
     1981 attgacttgc ggatacggtc ggcgcggacc ggacggtcgt ccacgccgcg cgcgatccaa
     2041 tagtaataag gtcccgcctt gccgaaatgc tgttgaagga acggcatcga ttgcgctctc
     2101 agatcgaggc cggtttcaat cccgagcctg ttcatcttcg cggtcgttgc cgggccgacg
     2161 ccgtggaatt taccgaccgg caagttctcg acgaaggcag gccccatctt cggcgtgatg
     2221 acgaagagtc cgtccggctt cctgtgatcg gaggcgagct tggccagaaa cttgttgtag
     2281 gaaaccccgg cggacgccgt gagactggtt tccgtgcgta tctcggccct tatggccatg
     2341 gcgatttccg tcgccgtcgc aatgccttgt agattgtcgg tgacatcaag ataggcttcg
     2401 tccagggaca gcggttcgat gagctgcgta tgttcggcaa agatttcgcg gatctgaagc
     2461 gacaccacct tgtaggcctc gaagcgcggc ttgacgaaga tcagatcggg gcattgccgt
     2521 ttggccgtga ccgatggcat cgccgagcgc acgccaaatt ttcgcgcctc gtagctcgcc
     2581 gccgccacga ccccgcgttc gcgcgaaccg ccgacggcga tgggcttgcc gcgcagttcc
     2641 ggattgtccc gctgttcgac ggaggcgtaa aacgcgtcca tatcgatatg aatgatcttg
     2701 cgcggccgtg tgggtccggc tgcggtttcc tgcgtccgca tttcgttgca gtccgttaag
     2761 ccggcagttt cttgcggcat catgattgtc agaccgtgag gccccccaga tcctcttttt
     2821 cgcctcttgc gacgatcctg agcgcaccat cggcgagcgg ccgttgcagc ttgagcgcgt
     2881 cctcggtgga cgcggtcatc cagagatcga tttcctctgg cgtcgtcagg atgaccggca
     2941 ttgctttggg atgaatggcg cccacctcct tgttgggatc agtcgtgaga aacccgaaca
     3001 gatcgttcgt cgtcgcgcct tccttgacct ttcgcacgga agtccagttg gtccagagcc
     3061 cggcaaagaa ggcgagcgga cgcgtctcat cgaacgcgaa ccacaccggc ggcttgcgac
     3121 cgtccggcag tgcttcgttc tcgctgaagc tggtgaacgg caccacgcag cgatgttcga
     3181 tgccgagcca gcgccgccag tgcggtgatt tgacgttgcg gatattggtc acgcccgtat
     3241 ccgcgttgcg ggttttcagg gcggtccgcg gcgacggcat gccccaccgc gccattgtca
     3301 gctcacggcc ctcctgctgg ttgcggacaa tgggcgcgcg ataatccgga tagacgcccg
     3361 gcatcagcgg caggttgccg gtccgatcgc tcatcgcgcg agccaactcg cggatcgctt
     3421 gctggctctt ggtcaaagag tagaggttgc acatgccgat caccgccaca tgcggcgcat
     3481 cttggcgccg acatcgacac gcacatgctt ggcgtctagc cgctccccgg ccgcaaccgt
     3541 cgcgagtggc cacgtcacgc attcgaaatg ctgcatgagc gccgccggaa tgaagcgtgt
     3601 ccgtgacgca tagacgtggc ggtcgccttg tgcattctgc ccgtgggtga agaagcggtg
     3661 cgggatgacg aggtgcaggc tgtctttcgc gcgcgtcatc gccacataga gcagccggcg
     3721 ctcctcctcg atctcggccg tggtccccac gccgaggtcg gaaggaatgc agccgtccac
     3781 cacattgagg acgaacacgg acttccattc ctgacctttc gcggaatgga tggtcgacag
     3841 gatcagataa tcctcatcca gcagcggcac ccccgcctga tcgctggtgg catcgggcgg
     3901 atcgagcgtg agttcggtga ggaaccgctc acgcgatgga tagcccgccg cgatctgttc
     3961 aagctgcacg aggtccgcct gccgaagcga ggcgtcctca tgaatgcgtt cgagatgcgg
     4021 ttcgtaccag cgccgcgcat attcgatctc ggccggccaa cctgcgccgc cggtgtggag
     4081 ctgctggagg gttttaacaa aggcaagcca atcctcgccc gaccgtggcg gggccggaat
     4141 atcgctgagc gcggacaacg gatcggcttt acctgccatc aggtcaagca cgcgttgagc
     4201 cgaagac
//
LOCUS       DATILV010000824         3913 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_972424, whole genome shotgun sequence.
ACCESSION   DATILV010000824 DATILV010000000
VERSION     DATILV010000824.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3913)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3913)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3913
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_972424"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            78..257
                     /locus_tag="VLJ17_20045"
     CDS             78..257
                     /locus_tag="VLJ17_20045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase"
                     /protein_id="HSV25306.1"
                     /translation="MSESGHLLRALGAGAVVAPGAQVSEAQAYSENNVEKRKTRYQAD
                     SADVKAFYRVNNYPR"
     gene            269..3196
                     /locus_tag="VLJ17_20050"
     CDS             269..3196
                     /locus_tag="VLJ17_20050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018316105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HSV25307.1"
                     /translation="MLIRKTDYPARRGSLAGLAAQSTALDRRAFLRRSGIGAGSLAVL
                     GTMPLGTVRKAEAAITGPLSIGAVIRKNICTHCSVGCTVTAEVVNGVWVGQEPSWDSP
                     INRGSHCAKGASVRELVSGERRLKYPMKLVNAQWTRISWDQAVNEIGDKLTKIRGQSG
                     ADSVYWLGSAKMTNEGAYLFRKLGAFWGTNNTDHQARICHSTTVMGVANTWGYGAMTN
                     SFTDIRNAKTQIIMGGNPAEAHPVSLQHLIEGAEMQRANVIVIDPRLTRTAAHATEYV
                     RLRPGTDIPVLYGMMWHIIKNGWEDKDFIRQRVYGYEDARKEMEKWTPEEVERVSGVP
                     GEQLKSVAEMFAKDKPSTLIWCMGQTQHTVGTANVRASCMLLLLTGNVGGSGMGANIF
                     RGHDNVQGATDVGLDILTLPFYYGLDEGAWKHWSRVWEVDYNYLVGRFDDKKVMETPG
                     IPLTRWFDAVLLAKDQVAQKDNVKAMFVQGHASNSITRIPESLKGLKALELLVIADPH
                     PTTWASLAVQAGRRDDMYLLPVATQFECRGSRTDGRRALQWGEQIVKPIFESKDDLEV
                     IYLMAKKFGFADQMFKNINVEDNLPAAEDVLREMNRGSFSTGYCGQSPERLKSHMAHQ
                     ADFDLTQRATTGPNKGDYYGLPWPCWGKPEVKHPGTPLLYNTNLAVMDGGGCFRARFG
                     VEREEKQPDGTTVKVSLLADGSYPKGSEIKDGYPEFTLAVLKKLGWDKDLTGAEMAVI
                     NKINPTTPDAVSWSTDLSGGIQRVALIHGCVPYGNAKARMKAFNLPDPIPVHREPIYT
                     PRVELVSKYPTLPDAKQFRLPNMGFSVQKAAVERGVAKQFPLILSSGRLVEYEGGGEE
                     TRSNKWLAELQQTMFIEINPADAADRGIKDGGLVWVTGAENGSKAKVTALVTERVGRG
                     VAWMPFHFGGWFAGQDLRANYPAGTDPIVLGESANTITTYGYDPATGMQEPKVTLCQI
                     TAA"
     gene            3209..3805
                     /gene="fdh3B"
                     /locus_tag="VLJ17_20055"
     CDS             3209..3805
                     /gene="fdh3B"
                     /locus_tag="VLJ17_20055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase FDH3 subunit beta"
                     /protein_id="HSV25308.1"
                     /translation="MARMKFLCDADRCIECNACVTACKNENEVPWGINRRRVVTLNDG
                     KPGERSVSMACMHCTDAPCAAVCPVNCFYTTADAVVLHSKDLCIGCGYCFYACPFGAP
                     QYPKVGNFGSRGKMDKCTYCAGGPEADGSKAEYEKYGANRLAEGKLPLCAEMCSTKSL
                     LAGDGDVIAQIYKERVSRRGYGSGAWGWQTAYGETIAT"
BASE COUNT          827 a         1142 c         1204 g          740 t
ORIGIN      
        1 gcgttaccct cgggctgagg atcacaccgt aacacatcga tgaatagggc gtgcgttgca
       61 ccaaattttg gctaccgatg tccgagtcgg gtcatcttct ccgcgcgcta ggcgccggcg
      121 cggtggtggc gcctggcgcc caggtgtcgg aagcccaagc ctattcggaa aacaacgttg
      181 aaaagcgcaa aacccgctac caagcggact ctgcggacgt caaagcattt taccgcgtca
      241 acaactatcc caggtgaggg aggcaatcgt gctgataagg aaaacagatt atccggcgcg
      301 ccgcggctcc cttgcggggc tcgccgccca aagcactgct ctcgaccggc gagcgttttt
      361 gcgccgttca gggatcggcg ccggcagcct cgccgtgctt ggcacgatgc cacttgggac
      421 cgtccgcaaa gccgaagccg ctatcactgg gccgctcagc attggcgcag taattcgcaa
      481 aaacatttgt acccactgtt ctgtgggctg caccgtcacc gctgaagtcg tgaacggcgt
      541 gtgggtcggc caagagccga gctgggactc gccgatcaat cgcggctcgc attgcgccaa
      601 gggtgcctca gtccgcgagc tcgttagcgg cgagcgtcgt ctaaagtatc cgatgaagct
      661 tgtgaacgct cagtggaccc gcattagctg ggaccaagcc gtcaacgaga tcggcgacaa
      721 gctgacgaag attcgcggcc agtctggtgc tgattccgtc tactggctcg gctccgcgaa
      781 gatgaccaat gaaggcgcct acttattccg caagctcgga gccttctggg gcaccaacaa
      841 cacggatcac caggcgcgta tttgtcattc gaccacggtc atgggcgtag ccaatacctg
      901 gggctacggt gcgatgacca acagtttcac cgacattcgc aatgcgaaga cgcaaatcat
      961 catgggcggc aatccggccg aagcccatcc ggtctcattg cagcatctga ttgaaggcgc
     1021 cgaaatgcag agggccaatg tgatcgtcat cgatccgcgc ctgactcgca ccgcggcgca
     1081 cgccaccgaa tacgtccgtc tgcgccccgg aaccgatatc ccggtgctgt acgggatgat
     1141 gtggcacatc atcaagaacg gctgggagga caaggatttc atcaggcagc gcgtttacgg
     1201 ctacgaagat gcgcgcaagg aaatggaaaa atggaccccg gaagaagttg aacgcgtttc
     1261 cggtgttccc ggcgaacagc tcaaaagtgt cgccgagatg ttcgcgaagg acaagccgtc
     1321 cacactgatc tggtgcatgg gccaaaccca gcacacggtc ggcaccgcga acgtgcgggc
     1381 gagctgcatg ctgctcttgc tcaccggcaa cgttggcggc tccggcatgg gcgccaatat
     1441 cttccgcggc catgacaacg tgcagggcgc caccgatgtt ggcctcgata tcctgacgct
     1501 gcccttctac tatgggctgg atgagggtgc gtggaagcat tggtcacgcg tttgggaggt
     1561 ggactacaac tatctggtcg gccgtttcga cgataagaag gtgatggaga cgcccggcat
     1621 cccccttacg cgctggttcg acgcggtcct tctggcgaag gatcaggtcg cgcagaaaga
     1681 caatgtcaag gcgatgttcg ttcagggtca tgccagcaac agcatcaccc gcatccccga
     1741 atcgctcaaa ggcctgaagg cgctggagct cttggtgatc gccgatccgc atccgacaac
     1801 gtgggcctcg ctcgccgtgc aggccggccg tagggacgac atgtatctgc tgccggttgc
     1861 cacgcagttc gagtgccgcg gttcgcgcac cgacggccgc cgcgcgttgc agtggggaga
     1921 gcagatcgtc aaaccgatct tcgagtcaaa ggacgatctc gaagtcatat acttgatggc
     1981 caagaagttt ggcttcgccg atcagatgtt caagaacatt aacgtggagg acaacctgcc
     2041 cgcggcagag gacgttcttc gcgagatgaa tcgtggcagc ttctcgaccg gctattgcgg
     2101 ccagtcgcca gagcggctca agtcgcatat ggcccatcag gccgatttcg atctcacgca
     2161 gcgtgcgacg accggcccga acaagggcga ttattacggt ctgccctggc cttgctgggg
     2221 taagcccgag gtcaagcacc cggggacacc gctcctctac aacacgaatc tcgcggtcat
     2281 ggacggcggc ggctgtttcc gggcccggtt tggtgtcgaa cgcgaggaaa agcagcctga
     2341 tggcacgacc gtgaaggtca gcctgctcgc cgacggatcg tatccaaaag gttcggaaat
     2401 caaggatggc tatcccgagt tcacactcgc ggtgcttaag aagctcggct gggacaaaga
     2461 cctgactggg gctgagatgg cggtgatcaa caaaatcaat ccgaccactc cggacgccgt
     2521 atcatggtct actgacttat ccggcggcat tcagcgcgtc gcattgatcc acggctgtgt
     2581 cccctacggc aacgccaagg cacgcatgaa ggcctttaac ctgccggacc caattccagt
     2641 gcaccgggag ccgatctaca cgccgcgagt cgagctggtg tccaaatatc cgaccttgcc
     2701 cgacgctaaa cagttccggc tgcccaacat gggtttctcg gtacaaaagg cagctgtcga
     2761 gaggggcgtc gccaagcagt ttccactcat cctttcgtcc ggccgattgg tcgagtacga
     2821 agggggcggc gaggaaacta gatctaacaa gtggctggcc gagctgcagc agacgatgtt
     2881 catcgaaatc aatcccgccg acgcggctga tcgcggcatc aaggatggcg ggcttgtttg
     2941 ggtcactgga gcggagaacg gctctaaggc caaggtcacg gcgctcgtta ccgagcgcgt
     3001 cggcaggggc gttgcctgga tgccattcca cttcggcggc tggttcgcag gtcaggatct
     3061 gcgggccaac tatccggcag ggacggatcc tatcgtgctc ggtgagagcg ccaacacgat
     3121 cacgacctac ggttatgatc ctgcgacagg gatgcaggaa cccaaggtca ccttgtgtca
     3181 gatcacagcg gcttgagggg gcgggatcat ggctcgaatg aaattcctct gcgacgccga
     3241 ccgctgcatc gagtgcaacg cgtgcgtcac cgcctgtaag aacgagaacg aggtaccgtg
     3301 gggcatcaac cgccgccgcg ttgtcacgct taatgacgga aaaccaggcg aacgttcggt
     3361 atcgatggcc tgcatgcact gcaccgatgc accttgcgcc gcagtttgtc cggtaaattg
     3421 cttttacacc acggcagacg ccgtagtgct gcacagcaag gacctgtgca tcggctgtgg
     3481 ttattgcttc tacgcctgtc cctttggggc gccacaatat ccgaaggtcg gcaactttgg
     3541 ctcgcgcggt aaaatggaca agtgcaccta ttgcgccggc gggccggaag cggacggtag
     3601 caaggccgag tacgagaaat atggtgccaa tcgcctcgcc gaaggcaaac tgccgctatg
     3661 tgccgagatg tgctcgacta agtcgctgct tgccggcgat ggcgacgtga tcgcgcagat
     3721 ctacaaggag cgcgtatcgc gacgcgggta tggctccggt gcctggggct ggcagacagc
     3781 ttacggcgag acaattgcga cctgattggg cggtcgcgtg ctgcaggtca gaaagaaggc
     3841 ttcgggcgaa gcgtgctgca cgcttaccaa tgtccgcttc tctaatcggc cgttcggggt
     3901 caagcacttt cag
//
LOCUS       DATILV010000825         4386 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2503292, whole genome shotgun sequence.
ACCESSION   DATILV010000825 DATILV010000000
VERSION     DATILV010000825.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4386)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4386)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4386
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2503292"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..339)
                     /locus_tag="VLJ17_20060"
     CDS             complement(<1..339)
                     /locus_tag="VLJ17_20060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25309.1"
                     /translation="MRSHLIAGLLEHLSIDPTHDVAARSAAAQPQCVIRVFRKDQMVG
                     GETGADQRKFLGTRIVHRDMPGGAFEGKNLGRRMIRTFLAEGRVRWRTNSRGKPNSRF
                     LIVHGVVLVGL"
     gene            304..1116
                     /locus_tag="VLJ17_20065"
     CDS             304..1116
                     /locus_tag="VLJ17_20065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25310.1"
                     /translation="MFEETGDEVRSQGWTPFVLDTNGNGKRDEWVEPKEPVDPTKDKR
                     IVAGLYGIAVSPVDGSVWGSVLVYPGQIIRVDLGSNPSETALSEVYEVPVEKGAYGIR
                     GMDIDRNGVAWASLASGHLASFDRRKCNVLNGPTATGKHCPEGWTLYPLPGPQFQNLS
                     ASGSVESSYYTWVDQFDTFGLGKDVPIATGNLNDALLAMVDGKFITLRVPYPMGFYAK
                     WMDGRIDDPKAGWKGKGLWATFGNRTPFHIEGGKGTKPKVLKFQLRPDPLAK"
     gene            1484..2809
                     /gene="soxC"
                     /locus_tag="VLJ17_20070"
     CDS             1484..2809
                     /gene="soxC"
                     /locus_tag="VLJ17_20070"
                     /EC_number="1.8.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013947968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite dehydrogenase"
                     /protein_id="HSV25311.1"
                     /translation="METKPSSRSKRVGEELAAVAGNGLLDRRAFLRGGAAFAAAMTGY
                     TFVQSAAAEPLADDPWSREPGTLVPTYGVPSRFEKNVVRTLSNPKGEPRTQHGRTPHH
                     LLNGTITPNGLHFVISHAGDADIDPEKHRLVIHGLVKRPLVFALDALARYPMVSRMTF
                     VECGGNSAPLFSNEPIQASLQALHGLASCAEWTGVRLSTLLEETGIDPKAKWLVAEGA
                     DAPALSRSVPLTKALDDAMVALYQNGERLMPGNGYPMRLLLPGWEGNMNVKWLRRLKL
                     VDQPAMTYYEARTYAPILPGGKAYQFYFLQEVKSFITHPSPGMMLNEAGFYEISGIAY
                     SGNGRISKVMVSADGGQSWAQAALQEPVHSKAFTRFRVPWNWNGGPAILQSRAWDEAG
                     NAQPTRAQVVALRGQTTKVPPVTAFPGQHYNAITSWAIDNKGEVKHVYA"
     gene            2796..3326
                     /locus_tag="VLJ17_20075"
     CDS             2796..3326
                     /locus_tag="VLJ17_20075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015598093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSV25312.1"
                     /translation="MFMRKIPITAFVLALSLGSSAVFAQAPNLGKPLDPAEITAWDIS
                     ILPDGTGLPPGSGTAAQGAPIYAQKCAMCHGIDGKGGVNAAVVGGGPLKDMESTKTIA
                     NFWPYATTLFDFTRRAMPWQQPKTLTNDEVYALTAYILALNKLIGENDEMNAKTLPKV
                     KMPNRDGFIIRFPDKL"
     gene            3388..>4386
                     /locus_tag="VLJ17_20080"
     CDS             3388..>4386
                     /locus_tag="VLJ17_20080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25313.1"
                     /translation="MHKSVAAGFAVVAGILVCSAPLHARITKIVVDEKISPAFCKGAS
                     CASYGDAGQYEQIAGRAFGELDPGDPLNKIIQDIGLGKDPDGKVRYVATFVVTKPVDM
                     AKASGLMWHDVPNRGRPLTISNMERGFGDVGLASAWQGDNASMRAGLGTAVRPTMNAE
                     GNHWLQVPVAKNPDGSPVTGPVMGRIVNRSGPDAQPLIIQSNPLPYMPASLDTSKATL
                     VTRDHESMEGVVTGETSIAGADWKFCGGGTFDAPVPLTKLPVQICLKGGFNPAKLYQV
                     VYTAKDPYVLGIGFAAWRDIASFFKYADQDDVGTANPLAGSISRSITRGRSQSGNYL"
BASE COUNT          928 a         1312 c         1323 g          823 t
ORIGIN      
        1 cagtccaacc agcacaaccc catgtacgat gagaaatcgc gagtttggtt taccgcgaga
       61 gttcgtccgc cagcgaaccc ggccttctgc aagaaaggtt cggatcatcc gtcggccaag
      121 gtttttcccc tcgaaagcgc cacccggcat gtctcgatgt acgatcctag tgccaagaaa
      181 tttacgttga tcagcacctg tttcaccacc caccatctgg tctttgcgga agacgcgaat
      241 aacacattgt ggctgagcag cggcgctgcg agcagcaacg tcgtgggttg gatcaatcga
      301 aagatgttcg aggagaccgg cgatgaggtg cgatctcaag gctggacgcc tttcgtcctc
      361 gataccaacg gcaacggcaa acgtgatgag tgggtggagc ccaaggagcc ggtcgatccc
      421 acgaaagaca agcggatcgt tgcaggcctt tacgggatcg ctgttagccc ggtagacggt
      481 tccgtctggg gatcggtatt ggtgtatccg ggtcaaatca ttcgggtcga cctggggtcg
      541 aacccatcgg aaaccgcgct gtcggaagtc tacgaggttc cggttgaaaa aggtgcatac
      601 ggtattcgcg gtatggacat cgaccggaac ggtgtggcct gggcatcgct ggcgagcgga
      661 catctagcga gcttcgaccg gcgcaagtgt aacgtcctta acggcccgac ggcaacagga
      721 aaacattgcc ccgaaggttg gacgctctat ccgctccccg ggccgcaatt tcagaatctg
      781 agcgcgtcag gcagcgtcga gtcgagctat tacacctggg tggatcagtt cgacaccttt
      841 ggattgggca aggatgtgcc catcgccacc ggcaatttga atgacgcgtt gttggccatg
      901 gtggacggaa agttcatcac tcttcgcgtg ccctatccaa tgggcttcta cgccaaatgg
      961 atggatgggc gcatcgatga tccgaaggcc ggttggaagg gcaaaggttt gtgggctacc
     1021 ttcggcaacc ggacgccttt ccacatcgaa ggcggcaaag ggacgaagcc caaagtgttg
     1081 aagttccagc ttcgccccga tccgctggcg aagtaagggc atcgagacaa caagttagct
     1141 cacacgagga ttgacggatc gggctcgtgc ggtccgccaa tatgatattt gcccctctcc
     1201 cctggctgta cgattaattc gctcccagca ttgcgagctg aatagatcag ctgcaagctt
     1261 ccactttctg cttgacagcc gctcttcggt tggaatacaa ggacatcgac cttgcaggag
     1321 ctgggtcatc acaccgggcc acaacctccg aaacgtgtca tattagctcg accgggcttg
     1381 tagtaaccga acttcttaaa gcagataaaa aaatccagaa aaatagtcgg cagaggataa
     1441 gtctctaacc cttttgatcc gacggtggcg caggaggacg actatggaaa cgaaaccaag
     1501 cagtcgatcc aagcgagtag gggaagaact ggcagcggtt gccggcaatg gtcttcttga
     1561 tcgccgcgct tttctccgcg gcggcgctgc gttcgccgcg gctatgacgg gttatacgtt
     1621 tgttcaatcc gcagccgcgg agccgctggc ggacgatccc tggagcagag aacccggcac
     1681 ccttgtccca acttacggcg tgccgtcgcg gttcgagaaa aacgtcgtgc gcacgctcag
     1741 caaccccaag ggcgagccgc gcacccagca tgggcgcacg ccgcaccatc tcctcaacgg
     1801 cacgatcacg cccaacggct tgcacttcgt gatttcacac gccggcgacg cggacatcga
     1861 cccggagaag caccgcctgg tgatccacgg cttggtgaag cggcccctgg tcttcgccct
     1921 cgatgcgctt gcgcgctacc cgatggtgtc acgcatgacg ttcgtcgaat gcggggggaa
     1981 cagcgcgccg ctgttttcca acgagccgat ccaggccagc cttcaggcac tacacggcct
     2041 cgcttcctgc gccgagtgga ccggtgtgcg gctctccact ttgctcgagg agaccggcat
     2101 cgatccgaag gcgaagtggc tcgtcgccga aggcgcggac gcgccggcct tgagccgcag
     2161 cgtgccgctc accaaggcct tggatgacgc gatggttgcg ctctaccaga acggcgagcg
     2221 gctgatgccc gggaacggct atccgatgcg cctgctcctg cccggctggg aaggcaacat
     2281 gaacgtcaaa tggctgcgcc gcctgaagct cgtcgaccag ccggccatga cctactacga
     2341 ggccaggacc tacgcgccga ttctgcccgg cggaaaggcg tatcagttct atttcctgca
     2401 ggaggtcaaa tcattcatca cgcatccttc gccggggatg atgttgaacg aggccggctt
     2461 ctacgagatt tccggcatcg cctattcggg caacggccgg atttcgaagg tcatggtgtc
     2521 cgccgatggt ggtcagagct gggcgcaagc ggcgctgcag gaaccggtgc acagcaaggc
     2581 tttcacccgg ttccgcgtgc cctggaactg gaatggcggc ccggcgatcc tccaaagccg
     2641 cgcctgggac gaggccggca acgcgcagcc aacgcgcgct caagtcgtgg ccctgcgcgg
     2701 ccagacgacg aaagtcccgc ccgtaacggc ttttccgggc cagcactaca acgccatcac
     2761 gagctgggcg atcgataaca agggggaggt caaacatgtt tatgcgtaag attccgatca
     2821 ccgcctttgt tctcgcgctc tctctcggtt cgagcgctgt ttttgcccaa gcgccgaatc
     2881 ttggaaagcc gctcgatcca gccgagatca cggcctggga catcagcatc ttgccggatg
     2941 gcaccggctt gccgcccggc agcggcacgg ccgcccaggg agcgcccatc tacgcgcaga
     3001 aatgcgcgat gtgccacggc atagacggca agggcggggt caatgccgcg gtggtcggcg
     3061 gcggcccgct caaggacatg gagtcgacga agaccatcgc caatttctgg ccctatgcca
     3121 cgaccctctt cgactttacg cgccgcgcga tgccgtggca gcaaccaaag actctcacca
     3181 acgacgaggt ctacgcactg accgcgtaca ttctggcgct caacaaactc atcggcgaga
     3241 acgatgagat gaacgcgaag acgctgccga aagtaaagat gccgaaccgg gacggcttta
     3301 ttattcgctt tccggataag ctgtagtgac cgaatgggca atagggagtc ctttgaggcc
     3361 gtagtgtcga acagaatatc tgaaagcatg cacaaatcgg tggcggcggg gtttgcggtg
     3421 gtcgcgggaa ttctagtctg ttccgcgccg ttgcatgcgc gcatcaccaa aatcgtcgtt
     3481 gacgaaaaaa tctcgccggc tttctgcaaa ggcgcctcgt gcgcctctta cggcgacgca
     3541 ggtcaatacg agcagatcgc cggccgcgca ttcggcgagc tcgatccggg cgatccgctc
     3601 aacaaaatca ttcaggatat cgggctcggc aaagacccgg acggtaaggt acggtacgtc
     3661 gccactttcg tcgtcaccaa gccggtggac atggcaaaag ccagcggcct gatgtggcac
     3721 gacgtgccca atcgcggcag accgctcacc atcagcaaca tggagcgcgg cttcggcgac
     3781 gtgggactgg cgagcgcgtg gcaaggtgac aacgccagca tgcgcgccgg gctcggcacc
     3841 gcagtgcgcc ccacgatgaa cgcggaaggc aatcactggt tgcaggttcc ggtcgcaaaa
     3901 aatccggacg gctcccccgt taccggtccg gtcatgggcc gcatcgtcaa ccgctccggc
     3961 cccgacgcgc agccgttgat catacagagc aaccccctgc cctatatgcc ggcgagcctc
     4021 gatacgtcga aagcgacgct cgtcacacgc gatcacgaat cgatggaagg tgtcgtcacc
     4081 ggtgaaacat cgatcgcggg agcggactgg aaattctgcg gcggtggtac gtttgatgcg
     4141 ccggtgccgc tgacgaaact gcctgtgcag atctgcctca aaggcggctt caatccggcc
     4201 aagctctatc aggttgttta caccgcgaaa gatccgtacg tccttggcat cggtttcgcg
     4261 gcgtggcgcg atatcgcgtc gttcttcaaa tatgcggacc aggatgatgt gggtaccgcg
     4321 aatccgctgg cgggaagtat ttcgcgcagc attacgcgcg gccgctcgca atccggcaat
     4381 tacctg
//
LOCUS       DATILV010000826         2916 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1482513, whole genome shotgun sequence.
ACCESSION   DATILV010000826 DATILV010000000
VERSION     DATILV010000826.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2916)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2916)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2916
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1482513"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(252..731)
                     /locus_tag="VLJ17_20085"
     CDS             complement(252..731)
                     /locus_tag="VLJ17_20085"
                     /inference="COORDINATES: protein motif:HMM:NF018232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1097 domain-containing protein"
                     /protein_id="HSV25314.1"
                     /translation="MGELRPFRREPEGAPHELDLHGIRCCHGGLVAIVVAGGVVPIAS
                     SIASAIAAGVASFVIVYVSRYLPFSNVPATFYGFASAFALLLLVPRAFSVEAMTANDL
                     RNVLVVSMPISLLIGSALGVVHQRFASLLTAPAQRSQAPSGTRLTPAEKRPLNGCER"
     gene            complement(841..1956)
                     /locus_tag="VLJ17_20090"
     CDS             complement(841..1956)
                     /locus_tag="VLJ17_20090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25315.1"
                     /translation="MPYMHMLSDPGMNYTLNRPLLDGTSPARIKEIGAVAPQIKDYES
                     WHAIWLGLAKRAEAEQRWLDAASYYHGAEFYLPAGEVRNGLYDDFARNWALGMKGVAG
                     YERIEVPYPGGHLPGFRLQAKGKELSTFIFNGGYDSFVEEFYGFLLPLTDFGFTVIGF
                     DGPGQGGALRRGIYFEHAWEKPAKAVLDYFKLNAADWLGASCGGYLAIRAAAFEPRIK
                     HIISLPTSYSGLDMTLKQMTPGKAAELVSLFKAGDRKGVEDLVARQRTPSSVFDWCVT
                     QGMHITGTKTPFDGILHNVKQDILLTEGEQDHLFDVDWLYRTMRELVCARSVTARIFT
                     AREGAEQHCQLGNSALAREEVLRWLSRFYPDMPSTKS"
     gene            2529..>2916
                     /locus_tag="VLJ17_20095"
     CDS             2529..>2916
                     /locus_tag="VLJ17_20095"
                     /inference="COORDINATES: protein motif:HMM:NF013260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV25316.1"
                     /translation="MRQPIEDGNITVARALGSINYPASFMLVAAMNPCPCGFFTDPQK
                     ECTCTPLQIQRYRSKVSGPLLDRIDIQIEVPTLRYQELAGKEAGEPSAAIRQRVNGAR
                     TIQLQRFHKRTIHSNAQMGAKDIKRYC"
BASE COUNT          645 a          871 c          821 g          579 t
ORIGIN      
        1 atttcatcaa cacgcttttc gtcagtaact cgaactaaaa agcctgcttt gtctaaagca
       61 tctacaaaat cggcaagtga ttgttgggaa gccatatgaa ttgttccttt atttttgctt
      121 ctaatttaag cgtaagcagg agcagaaaca ccggcttgga ctgagatctg ataccgggtc
      181 aagcagcagt gctcggtcaa acgcggcacc tgctccgccc atgccgctcg agcagtgcct
      241 tggtcaacgc gtcaacgctc gcaaccgttt agaggcctct tttcagcggg cgtcagccgc
      301 gtccccgaag gtgcctgcga acgttgcgcc ggcgcagtca acagcgaggc aaaccgttga
      361 tggacgacgc ccaatgccga tccgatcaac agtgatatcg gcatggagac caccagcaca
      421 ttgcgcaagt catttgcggt catcgcctct accgagaatg cccgaggcac aagcaacagt
      481 aaagcgaacg ccgacgcaaa accgtagaac gtggcgggca cgttggagaa cggcaggtat
      541 cgcgagacgt acacaattac gaacgaggcg accccagccg cgatcgccga tgcaatcgag
      601 cttgcgattg ggaccacgcc tcccgccacg acgatcgcga ccagcccgcc atgacaacac
      661 cgaataccat gcagatcgag ctcgtgagga gcgccttccg gttcgcgcct gaatggtcgt
      721 agctcgccca cccgacgaag gccgcccaga cccagagccc cagaaggccg gaaaaggcca
      781 gcaccgtggc cgcggccagc ccggcggccg agagcgcgcc cgcgatcagc ggcgaaagat
      841 tcacgacttg gtcgacggca tgtcgggata gaaccgcgac aaccaccgca ggacctcctc
      901 gcgcgcaagc gcggagttgc ccagctggca atgttgctcg gcaccctcgc gcgcggtgaa
      961 gatccgcgcc gtgacggaac gcgcgcagac gagctcgcgc atcgtccggt aaagccagtc
     1021 aacgtcgaaa agatgatcct gctcgccttc cgtcagcagg atgtcctgct tgacgttgtg
     1081 caaaatgcca tcgaacggcg ttttcgtccc ggtgatgtgc atgccttggg tgacgcacca
     1141 gtcgaatacg gagcttggcg tgcgctggcg ggcgacgaga tcctcgacgc ctttgcgatc
     1201 gcccgccttg aagagcgaca ccagctcagc ggccttgccc ggcgtcatct gtttcaacgt
     1261 catatcgagc cctgagtatg acgtgggcag cgaaatgatg tgcttgatcc gcggctcgaa
     1321 cgcggccgcc cggatagcga gatagccgcc gcaggaagcg cccagccagt cggcggcgtt
     1381 gagcttgaaa tagtcgagca ccgccttggc cggcttctcc caggcgtgct cgaagtagat
     1441 gcctcgtcgc agcgctccac cctgcccggg gccatcgaat ccgatcaccg taaaaccgaa
     1501 atcggtcagc ggcaacaaaa acccatagaa ttcttcgacg aaggaatcgt agccgccgtt
     1561 gaagatgaac gtgcttagtt ccttcccctt cgcttgcaga cgaaatcccg gcaagtgtcc
     1621 gcctgggtag ggaacctcga tccgttcgta ccctgcgacg cccttcattc cgagggccca
     1681 gttgcgcgcg aagtcatcgt agagaccgtt gcggacctca ccggcgggaa gatagaactc
     1741 cgcgccgtgg tagtacgagg cggcatcgag ccatcgctgt tcggcttcgg cgcgcttagc
     1801 gagtcccagc cagatggcgt gccagctttc gtaatctttg atctgcggcg caaccgcgcc
     1861 aatttccttg atccgggccg gggacgtgcc atcgagcaat ggtcggttga gcgtgtaatt
     1921 catacccgga tcggacagca tatgcatgta cggcatattg gctcctttca gtagttgtcg
     1981 gtcgtggcga gggtactagg gtgggaccga atacgctggg ttacccaacg gtcgcagcga
     2041 tttcgcgttg ccggcgcaat ccataacgca ctcccaatcg tcgatctgcg cgaacgcgtt
     2101 gccctttggc ggcggtgatg tgaagccttg gtggagtcgc gcgtgcagtc gcttgcagat
     2161 gcagagaccg ttgcgacgcc cctcagcctt ttactatgcc gcaatcatga cgttgtcaat
     2221 cggatgtact cgttcaatac atatgagaca gggcggtcaa gtgagccaca tatcagcgcc
     2281 ggtttaaaac tcccggaaga atttccggtt gaaaattcaa atggtggtgt ttttcgtctt
     2341 tgtcgcacga tctcgttggg ggcctaatgg atttaactga tcgtcgcttc gcttcgacat
     2401 cgtggaagtc gccagtcgag ctttcgaacc gaagtcttaa acgccaaaat tggtctatcc
     2461 agcggtgaca caatagggtc ttattcctgg acgaactgcc agagtttaag cgcaacgttt
     2521 tggaagtgat gcggcagccc atcgaagacg gaaatattac cgttgcacgc gccttgggat
     2581 cgatcaacta cccggcgagc ttcatgctgg ttgccgcgat gaacccttgt ccctgtggat
     2641 tttttaccga tccgcaaaaa gagtgcactt gcaccccgct ccagatccag cgctatcgat
     2701 ccaaagtctc tggccctttg ctagacagga tcgacattca aatcgaagtc ccgaccttgc
     2761 gttatcaaga actcgccggc aaagaggcgg gggagccttc cgctgccatt cgccagagag
     2821 tcaacggcgc acgcaccatc caactccagc gcttccacaa aagaaccatc cattccaacg
     2881 ctcaaatggg cgctaaagac atcaagcgct attgcg
//
LOCUS       DATILV010000827         4566 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_710610, whole genome shotgun sequence.
ACCESSION   DATILV010000827 DATILV010000000
VERSION     DATILV010000827.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4566
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_710610"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..290)
                     /locus_tag="VLJ17_20100"
     CDS             complement(<1..290)
                     /locus_tag="VLJ17_20100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25317.1"
                     /translation="MRAFTRSLLVLLLLGLSAGSLSSQQPASTHVVTTAEYERWKNDL
                     SNWGRWGKDDEIGALNLITPAKRTQAAGLVKEGFSVSLAGDADTVQAVDNPNP"
     gene            complement(287..817)
                     /locus_tag="VLJ17_20105"
     CDS             complement(287..817)
                     /locus_tag="VLJ17_20105"
                     /inference="COORDINATES: protein motif:HMM:NF013482.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25318.1"
                     /translation="MGEFGIGQPVPREEDPYLVRGAGRYVDDVQAIGQARGYVLRSPR
                     AHAGIVRIDAGEARAKPGVLLILTGDDAEVLRLGLLQPHTPRKRRDGTPAFASSQPFL
                     ARERVRYLGDPVAWRIRHRRSSVVGDECREQRTRPDRCAVCANAGDTRKSVAGDEGRS
                     GIVKRYGEISMLEDAP"
     gene            complement(936..1700)
                     /locus_tag="VLJ17_20110"
     CDS             complement(936..1700)
                     /locus_tag="VLJ17_20110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003518782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HpcH/HpaI aldolase/citrate lyase family protein"
                     /protein_id="HSV25319.1"
                     /translation="MELPRNGFKHAIAAGQLQIGLWCSLCSNIAVDIVRDSGFDWLLL
                     DTEHSPNEIPDVLSQLQASEGGAATPIVRPAWNDTVIIKRCLDIGVQSLLVPYVQNPD
                     EAKRAVEAVRYPPAGVRGVAVASRASRYGRVTDYLKKANAEICLLVQVETRSAMQHLE
                     AIATVEGVDGVFIGPSDLSASLGHIGNPAHPEVQKALEDCVRRLKAVGKPAGILSGNE
                     EEVRRYISWGYTFVAVGSDVGLLGRGADALAKKYKR"
     gene            complement(1714..2496)
                     /gene="hpaH"
                     /locus_tag="VLJ17_20115"
     CDS             complement(1714..2496)
                     /gene="hpaH"
                     /locus_tag="VLJ17_20115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012559030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018817 - 2-oxo-hept-3-ene-1,7-dioate
                     hydratase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo-hepta-3-ene-1,7-dioic acid hydratase"
                     /protein_id="HSV25320.1"
                     /translation="MLSDADRKKAADILMAAEKERKQAVQLSRTWPDITLDDSYAIST
                     EVAQRKIAAGAKLIGHKVGLTSKAMQRSSQIDEPDYGHLLDSMLIADGAKVPHENFCL
                     PRVEVELAFVLGKRLLGPGVGLTDVLRATEYIIPALEIVDARIQDPRKIVDTVADNGA
                     AAGIVVGGRPVGPMDVDLRWVGGVMYRNSEIEETGVAAGVLGHPALGVAWLANKLGAH
                     GVALEPGHIVLAGSFTRVVFAKKGDTLHGDFGALGGIAVQFV"
     gene            complement(2647..2916)
                     /locus_tag="VLJ17_20120"
                     /pseudo
     CDS             complement(2647..2916)
                     /locus_tag="VLJ17_20120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007611581.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antitoxin"
     gene            3455..>4566
                     /locus_tag="VLJ17_20125"
     CDS             3455..>4566
                     /locus_tag="VLJ17_20125"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007751678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSV25321.1"
                     /translation="MNVIEKPTAGMSPATSDLDRFRLRRFVENLAGTDEFEQREAPVD
                     LADIAKILDGNPRAVHFLAAGPEQQELVGNVMSSRNRIARAFGVAPERLAAEIGRRLA
                     GTPQIVEVPRAEAPAQEVELIGEEADLTALPVHLQHGLDGAPYISASIDYAVDVRTGW
                     TNVGIRRLMLRGRREAGVDLVSPSDLRALYEASVAEGKALPVSFVVGAHPVDHIAAVM
                     RMPVDELGIVASLRDAPLPVVKCLTNDIRVPADSEMVLEGYFDARGHVEAEGPYGEFL
                     GYYGAVKRNPVFHLTAVTRRRDALFQTATIGGRAMSRTDTAVLTSVRTEVVIWRALEI
                     AVREPVAVYATASSGGSFNVRVALRQRVPGEARNAIA"
BASE COUNT          835 a         1428 c         1419 g          884 t
ORIGIN      
        1 gggttggggt tgtcgaccgc ctggacggtg tcggcgtcgc ccgccaggga caccgaaaat
       61 ccctccttta cgaggcctgc cgcctgcgtt cgcttcgccg gcgtaatcag gttgagggct
      121 ccgatctcgt catccttgcc ccagcgtccc caattggaga ggtcgttctt ccagcgttca
      181 tactccgcag tggtgaccac atgcgttgag gctggttgtt gtgaagacag gcttccagcc
      241 gacaacccta acagcaacaa caccagcaga cttcgcgtaa aggctctcat ggtgcatcct
      301 ccaacatgga gatttcgccg tacctcttga ctatacccga gcgcccctca tcgcccgcca
      361 cactttttcg ggtgtcgccg gcatttgcac atacggcgca ccgatctggg cgagtgcgtt
      421 gttcacggca ttcatcaccg acgacagagc tccgacggtg cctaattcgc caagccaccg
      481 gatcgcccag atagcgcacc cgctcgcggg caagaaacgg ctgcgacgac gcaaaggctg
      541 gcgtgccatc acgtcgcttg cgcggggtgt gcggctgcag caggccgagt cgaagcacct
      601 cggcgtcgtc ccccgtcagg atcagaagga cgccgggctt tgctctcgct tcccctgcgt
      661 caatccgtac gatgccggca tgggcgcgcg gcgagcgcaa cacatagccg cgtgcctgtc
      721 cgatcgcctg tacgtcatcg acatagcgcc cggcaccgcg cacgaggtag gggtcttcct
      781 cccgagggac tggctgccca atgccgaatt cacccatgag acctccacgt ggtcaaggca
      841 gtgccggcaa cggcatccac accttatcga tacgccgcag gggcgggggg tgcccaagat
      901 gcgagcatca atttcgtatg acataagcgg agcggtcatc ttttgtattt cttcgccagc
      961 gcgtcggcgc cgcggcccag gagcccgacg tcggaaccga ccgctacgaa tgtgtagccc
     1021 cagctaatgt atcggcgcac ttcttcctcg ttgccactga ggatgccggc cggtttgccg
     1081 acggccttga ggcgacggac gcagtcctcc agggcttttt ggacctccgg atgggccgga
     1141 ttgccgatat ggccgagcga agcggacagg tcggacgggc cgatgaagac gccgtcgacg
     1201 ccttcaaccg ttgcgatcgc ctcgagatgt tgcatggcgc tgcgcgtttc gacctggacc
     1261 agcaaacaga tttcggcatt ggcctttttc agatagtcgg tgacgcggcc gtagcggctg
     1321 gcgcggctgg cgaccgcgac gccgcggacg ccggcgggcg gatagcgtac cgcttcgacg
     1381 gcgcgcttcg cctcatcggg attttgcaca taaggcacca gcagggactg taccccgatg
     1441 tcgaggcaac gtttgatgat gacggtgtca ttccacgccg gccgcacgat cggggtcgcg
     1501 gcgccccctt cgcttgcctg cagctgcgac aggacatcgg ggatttcatt gggcgaatgc
     1561 tcggtgtcga gcaacaacca gtcgaaccct gagtcgcgta cgatgtcgac cgcgatgttg
     1621 ctgcacaggc tgcaccacag gccaatctga agctggcccg ccgcgatggc gtgcttgaag
     1681 ccgttacggg gaagttccat tatttttctc caatcaaacg aactggaccg cgatgccgcc
     1741 gagcgcgccg aaatcgccgt gcagggtgtc gcctttcttg gcgaacacca cccgggtgaa
     1801 cgaacctgcg agcacgatgt gaccgggctc cagcgccacg ccgtgagcgc cgagcttgtt
     1861 ggcaagccag gcgacaccca gcgccggatg gccgagcacg cccgccgcga cgccggtctc
     1921 ctcgatctcg gaattgcggt acatgacgcc gccgacccag cgcaggtcga catccattgg
     1981 tccgaccggc cgccccccca ccacgatgcc ggccgcggcg ccgttgtccg ccacggtgtc
     2041 gacgatcttg cgcgggtcct ggatccgcgc atcaacgatt tccagcgccg ggataatgta
     2101 ttcggtcgca cgcaaaacgt cggtgaggcc gacgccggga cctaggagcc gcttgccgag
     2161 cacgaaagcc aattcaacct cgacccgcgg caggcagaaa ttctcatgcg gtactttggc
     2221 gccgtcggcg atcagcatgc tgtcgagcag atggccatag tccggctcat cgatctggga
     2281 tgatcgctgc atcgccttgg aggtcaggcc cactttgtgg ccgatcagct tggcgcccgc
     2341 cgcgatcttg cgctgtgcga cctcggtcga gatagcataa gaatcgtcca gcgtaatgtc
     2401 tggccaggtc ctggagagct gaacggcctg tttacgctct ttctcggcgg ccatcagaat
     2461 atcggcggcc tttttgcggt cagcgtccga aagcatgggc ttcctccgtg gatggggcgg
     2521 ggattgttat tgcacggcct cgccgttgac aacgaaacga cgcgatagag caaatgatgg
     2581 ctggaccgcg tccgcatcag tcaaatcggt tcggtgccga ctcgcatgtt tgcggtcggt
     2641 taacttcggc aattttctta tccgatcacc gacttccagg cgagccaggc gaagctcata
     2701 cagcgtttgc aagttgagcc agaactcggg agtggtcccg aaccagtgac cgagtcgcaa
     2761 ggcggtgtcg gctgtcacgc cacgttcgcc gttgagaatc gcggtaatgc ggttcaccgg
     2821 cacgttgatc tgtcgcgcca gttcggcagc cgacatgccg agttcgttca gttcttcggc
     2881 aagatgctcg ccggggtgaa taggagtgcg tgccatcgtt ctcccccgtt gaaacaagcc
     2941 atgaacccaa ggattgcgtg tgcatcatcg gtgatagtcg acgatctcaa cgttgatggg
     3001 ccgggcgagc cttcaggcca ctcagagcaa atccgcttgt tattgatgcg gatgctgcac
     3061 tggccctgcc gatcgcctct cacggcttca agtcgattgc tgggcaaagc ggcaaggtct
     3121 ttgagggtcg ccgccgtatc cagtcggtca aagacgtatc ttcgccgttt ggcgaaaccc
     3181 gaaaattccc gaacgggctc gccatttgca aagcgttcgg ttttacgatt ccggcagctt
     3241 acaatcatcc tgaaacttag gtgaagttac gctttacgta aggcataaat tctggtgcgg
     3301 cgctcagcaa gccatcggcg cgattggtcc caccgagcaa tgggcaaaac gtgtgccgtc
     3361 gcccaacttt tcgggccgcg aattgggtgc cggcgtttgc ccgaatatcc gattgcagta
     3421 cattgacatg caatgacgaa cccaaggatc aagcatgaac gtgatcgaga aaccaacggc
     3481 gggcatgagc cctgcaacga gcgacctcga tcgcttccgc ctgcgccgat tcgtcgaaaa
     3541 tcttgccggt accgacgaat ttgaacagcg cgaggcgccg gtcgatcttg ccgacatcgc
     3601 caaaatcctg gatggcaatc cgcgtgcagt acactttttg gcggccggtc ccgagcagca
     3661 ggagttggtc ggcaatgtga tgtcgagccg caaccgcatt gcgcgtgcct ttggggttgc
     3721 gccggaacga ctcgcagccg agatcgggcg gcggcttgcc ggcacgccgc agatcgttga
     3781 ggtgccccgc gcggaagcac cggcccaaga ggtggagctc attggcgagg aggccgacct
     3841 caccgcgctg ccggtgcatc tccagcacgg cctcgacggc gctccctaca tttccgcctc
     3901 gattgactat gcggtcgatg tcaggaccgg ctggaccaat gttggcatcc gacgtctgat
     3961 gctgcgcggg cgtcgcgagg ccggcgtcga cttggtatcg ccaagcgatt tacgtgcgct
     4021 ctacgaggcg agcgtcgccg agggcaaggc gctgccggta agcttcgtgg tcggagctca
     4081 tccggtcgac catatcgccg ccgtgatgcg catgccggtc gacgaactcg gcatcgttgc
     4141 gtcgttgcgc gacgcgccgc tgccggtggt caagtgcctc accaatgaca ttcgcgtgcc
     4201 ggccgattcc gagatggtgt tggaaggcta tttcgacgca cggggccatg tggaggccga
     4261 aggcccgtat ggcgagttcc tcggctacta cggcgccgta aagcggaacc cggtgttcca
     4321 cctcaccgcc gttacgcgcc ggcgtgatgc gctattccag accgcgacca tcggggggcg
     4381 cgccatgagc cgcaccgaca cggccgtcct cacgtcggta cgcacagagg tcgtcatctg
     4441 gcgggcgctc gaaattgcgg tgcgcgagcc tgtcgccgtc tatgccacgg cttcaagcgg
     4501 cggcagtttc aatgtcaggg tggcgctgcg ccaacgcgtg cctggcgagg cgcgcaacgc
     4561 gatcgc
//
LOCUS       DATILV010000828         3475 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2245246, whole genome shotgun sequence.
ACCESSION   DATILV010000828 DATILV010000000
VERSION     DATILV010000828.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3475)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3475)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3475
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2245246"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..446
                     /locus_tag="VLJ17_20130"
     CDS             <1..446
                     /locus_tag="VLJ17_20130"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV25322.1"
                     /translation="ALLEALADGTIDCIATDHAPHALSDKEGEFAEAANGVVGLETAV
                     SVLLDRLVRAGRLDLSTLVARFTTGPSRLLNLPGGSLAAGAPADITVLDLERSWTVEP
                     GRFLSRSRNTPFGGWTGQGGPVLTLVGGVPALPGRQPLAVPGAPA"
     gene            443..1594
                     /gene="carA"
                     /locus_tag="VLJ17_20135"
     CDS             443..1594
                     /gene="carA"
                     /locus_tag="VLJ17_20135"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005951 - carbamoyl-phosphate synthase
                     complex [Evidence IEA];
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HSV25323.1"
                     /translation="MNPALLVLADGRVFRGDACGAEGETHGEVVFNTAMTGYQEILTD
                     PSYAGQIITFTFPHIGNVGANDEDIETVNLAATPGARGVILHAGITNPSNYRARRHLD
                     HWLKARSIIGLAGIDTRALTSLIRQKGMPNAMIAHAPNGKFDLNALKAEARAWPGLVG
                     MDLVPMVTSGQRFTWDETPWRWNVGHSRQASPKFNVVAVDYGIKRNILRLLASAGCKV
                     TVVPATTSAVDIFDLKPDGVFLSNGPGDPAATGRYAVPVIRELIDAGMPTFGICLGHQ
                     MLGIAVGGKTMKMHQGHHGANHPVKDLTTGKVEITSMNHGFAVDRTSLPEHVAETHVS
                     LFDGSNCGIALKGSPVFSVQYHPEASPGPRDSHYLFDRFVGLMCANRRT"
     gene            1601..3166
                     /locus_tag="VLJ17_20140"
     CDS             1601..3166
                     /locus_tag="VLJ17_20140"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HSV25324.1"
                     /translation="MSAPAYLKLENGPLGRAFGAWLDHTPSGLATRFLLLWFVLLYTA
                     FHIISSASVGLHPDLLEAYGWGLHLSAGYDHHSPLAGLMAGAWFSLFPPTDWAFDLLA
                     MVNAAAGLYATDRIARRYLDGDKRIVVLLLLLLTPFYQFYGQRFGANQTLLSTWPIAT
                     YCFLRAFEARDLAWSAAAGAAAAIAMLGKYYSIFLIVGFVAAALTHPKRWVYLQSWSP
                     WISAAVGGVVLAPHVQWLFATGFTTFAFATTVHAGAPPVEALWKDAVYVAEAVAYVGV
                     LLAVYWTAVRPDQTILRETFWPPDPDGQMLVVLLVAPLVLPAVVAPFIGAVLTPLWTM
                     SAWFLLPIVLLRPKSADLARIAAIRITALAVTITIGSLIAAPWLAWRKFTDGTKEGRE
                     YYRLVSTEITNAWHLATGLPLGIVMGNRYLASAVTFYSPDHPDSMPGFEIDTATPWIT
                     PERLAGDGWAAVCNADDQNCAEAARHQAAGKANVQFVTYSTINHYLGKPGKLGRFFFI
                     LAAPESKPLILQR"
     gene            3163..>3475
                     /locus_tag="VLJ17_20145"
     CDS             3163..>3475
                     /locus_tag="VLJ17_20145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HSV25325.1"
                     /translation="MTTMKNWVAYYDSNHSIYVNARHRDVHYAQLADAIVSYIPTRTA
                     AVLDYGCGEALHADRVAAAAGRLTLAEAGPAVRGRLIERFKENPKIVVISTDRAANML
                     SQ"
BASE COUNT          574 a         1138 c         1071 g          692 t
ORIGIN      
        1 aagccctgct ggaggcgctc gccgacggca ccatcgattg catcgccacc gaccatgcgc
       61 cgcatgcgct ctccgacaag gaaggcgagt tcgcggaggc ggccaatggc gtggtcggcc
      121 tcgagaccgc ggtgtccgtg ctcctggatc ggctggtccg cgccgggcgt ctcgacctgt
      181 ccacgctggt cgcacgcttc acgacgggac cgtcgcggct cctgaacctg cccggcggca
      241 gcctggccgc gggcgcgccc gccgacatca ccgtcctcga cctggagcgg agctggacgg
      301 tagagcccgg tcgcttcctc tcgcgcagcc gcaacacacc cttcggcggc tggacgggtc
      361 agggcggccc cgtgctcacg ctggtgggcg gggtgcccgc cctcccgggg cgccagcccc
      421 tcgccgtccc cggagccccc gcgtgaaccc cgcgctgctg gtactggccg atggccgcgt
      481 cttccgcggt gacgcctgcg gcgccgaggg cgagacgcat ggcgaggtgg tcttcaacac
      541 ggccatgacg ggctaccagg aaatcctcac cgacccgtcc tatgcgggac agatcattac
      601 cttcacgttc ccgcatatcg gcaatgtggg cgccaacgac gaggatatcg agaccgtcaa
      661 tctcgccgca acgcctggcg cacggggcgt gatcctgcac gcgggcatca ccaatccgtc
      721 gaactatcgt gcacgccgtc atctcgacca ttggctcaag gcgcgcagca tcattggact
      781 ggccggcatc gatacccgcg ccctcaccag cctcattcgc caaaagggca tgcccaatgc
      841 gatgatcgcc cacgcgccca acggcaagtt tgatctcaac gccctcaaag cggaggcgcg
      901 cgcgtggccc ggcctcgtcg gcatggacct ggtgccgatg gtgacgtccg gtcagcgctt
      961 cacgtgggac gaaacgccat ggcggtggaa cgtcggccat agccgccagg cgtcgcctaa
     1021 attcaacgtg gtcgctgtcg attacggcat caagcgcaat attctgcgcc ttcttgctag
     1081 cgccggctgc aaggtgacgg tggtgcctgc caccacctcg gcggtcgaca tcttcgacct
     1141 caagccggac ggcgtgttcc tgtccaatgg cccaggcgat ccggccgcta ctgggcgata
     1201 cgccgttccg gtgattaggg agttgatcga tgccgggatg cccaccttcg gcatctgcct
     1261 cggccaccag atgctcggca ttgcggtcgg cggcaagacc atgaagatgc atcagggcca
     1321 ccacggtgcc aaccatccgg tcaaggacct gactaccggg aaggtggaga tcacgtcgat
     1381 gaatcacggc ttcgcggtcg accgcacaag cctgcctgag cacgtggcgg aaacccatgt
     1441 gtcgctgttt gacggatcga attgcggcat cgcgcttaag ggctcgccgg tgttctcggt
     1501 gcaataccac cccgaagcct cgccgggccc ccgtgacagc cattacttgt ttgaccgttt
     1561 cgtcgggttg atgtgcgcga accggcgaac gtgagccgtc atgagtgcgc cggcctacct
     1621 caaacttgag aacgggccgc tcggacgggc gtttggagcc tggcttgacc acacacccag
     1681 cggacttgcg actcgctttt tgctgctgtg gttcgtgctc ctctacaccg cgtttcatat
     1741 catttcctcc gcttcggtcg gtctccaccc tgacctgctg gaggcctatg gctggggtct
     1801 gcatctttcc gccggctacg accatcactc gccgctcgcc ggcctgatgg caggtgcgtg
     1861 gttctcgttg tttccgccga cagattgggc gttcgatctg ctggccatgg tcaatgcggc
     1921 ggcagggctc tacgcgaccg atcgaattgc ccgacgatac ctcgacggcg acaaacggat
     1981 cgtggtgttg ctcctgcttc tgctgacgcc gttttatcaa ttttacggcc aacgcttcgg
     2041 cgccaaccag accttgctgt ccacctggcc gatcgcgacc tattgcttcc tgcgcgcctt
     2101 cgaggcgcgt gaccttgcgt ggtcggctgc agcgggggcc gccgcggcaa tcgcgatgct
     2161 agggaagtac tattctattt ttctcatcgt cggctttgtc gcagctgcgc tgacgcaccc
     2221 caagcgctgg gtctatctgc aatcctggtc gccatggatt tcggcagccg tcggcggcgt
     2281 agttctcgcc ccccatgtcc aatggctgtt tgcaacggga ttcacgactt tcgcgtttgc
     2341 aaccacggta cacgcgggcg cgccgcccgt cgaagcgctg tggaaggacg ctgtgtacgt
     2401 tgccgaggcc gtcgcttatg tgggtgtcct gcttgcggtt tattggaccg cggtgcggcc
     2461 tgatcagacg atcctgcgag aaaccttttg gccgccggat ccggatgggc agatgttggt
     2521 cgtcctcctc gtggcgccgc tggtgttgcc ggctgtggtg gcgccgttca tcggcgcagt
     2581 gttgacgcct ttgtggacga tgtcggcatg gtttctgctg ccgatcgtct tgctgcgacc
     2641 gaagtcggcc gacctcgcgc gcattgccgc aatccgtatc accgcgcttg ccgtgacgat
     2701 cacgatcggc tccctgatcg cggcgccgtg gctggcgtgg cgcaagttca ccgatgggac
     2761 caaggaaggc cgcgaatatt accggttggt cagcacggag attaccaatg cttggcacct
     2821 cgcgaccggc ctgccgctag ggatcgtgat gggcaaccgc taccttgcat ctgcggtgac
     2881 gttctacagc ccggatcacc ccgattcgat gccgggtttc gagatcgaca ccgcgacgcc
     2941 ctggatcacg cccgagcggc ttgcgggcga tggttgggcc gcggtctgca atgcagacga
     3001 ccaaaattgc gctgaagccg cgcgacacca ggctgccggc aaagccaacg tacaattcgt
     3061 cacctactcg acaataaacc actatcttgg caagcccggt aaactcgggc ggttcttttt
     3121 catcctggcc gcacctgagt caaaaccttt gatcctgcag cgatgactac gatgaaaaac
     3181 tgggttgcgt attacgattc caaccattcg atctacgtga atgcccgcca tcgcgacgtg
     3241 cactatgcgc agcttgccga tgcgatcgtg agctatattc cgacccgcac cgccgccgtc
     3301 ctcgattatg gctgcggcga ggcgctgcat gctgaccgcg tagccgctgc ggctggacgg
     3361 ctgacgctcg cggaagccgg acctgccgtg cgcggtcgcc tgatcgagcg tttcaaagag
     3421 aatccgaaga tagtggtgat atctacagat cgggcggcaa acatgctgtc ccaat
//
LOCUS       DATILV010000829         1666 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3015428, whole genome shotgun sequence.
ACCESSION   DATILV010000829 DATILV010000000
VERSION     DATILV010000829.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1666)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1666)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1666
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3015428"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..428
                     /locus_tag="VLJ17_20150"
     CDS             <1..428
                     /locus_tag="VLJ17_20150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020096452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSV25326.1"
                     /translation="SQQTTSTKKIKHLVKLKSIGPEFATVLVGEVFYRTFNNRKQIGS
                     YVGLTPSPFQSGSTSRDQGISKAGNTKARTTMIELAWLWLRNQPDSLLSVSFRERVGS
                     RKGRIKRIAIVAMARQLLIALWRYLETGVVPEGAVLKCK"
     gene            complement(1022..1210)
                     /locus_tag="VLJ17_20155"
     CDS             complement(1022..1210)
                     /locus_tag="VLJ17_20155"
                     /inference="COORDINATES: protein motif:HMM:NF025292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin-like domain-containing protein"
                     /protein_id="HSV25327.1"
                     /translation="MCTASSITKVDVAWNPEWVGTEQTRSFRIDGERLQVLTPWRVMP
                     NWPEKGMQRSIITFERSQ"
     gene            complement(1257..>1666)
                     /locus_tag="VLJ17_20160"
     CDS             complement(1257..>1666)
                     /locus_tag="VLJ17_20160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007596099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSV25328.1"
                     /translation="IPGRDFPGSVARIADALQPGTRTLLTEIDVPNPEHTLSPGMYCR
                     VELKIPRKAQSLIVPSEAIIFNRNGLSVAVVENDTARIRPITAVRDFGTSVEVSTGVA
                     AGDRVILNPQVDLTDGRKVTIRPDPPKPDQKKS"
BASE COUNT          348 a          492 c          503 g          323 t
ORIGIN      
        1 agtcacagca gacgaccagc accaaaaaga tcaaacatct ggtcaagctc aagagcatcg
       61 ggccagagtt tgccacggtg ctcgtcggcg aagtgttcta tcgaactttt aacaaccgca
      121 aacaaatcgg aagctatgtt ggtctaacgc cgagcccttt tcagagcggg tcgacatccc
      181 gcgatcaggg catcagtaag gccggaaaca ccaaagcgcg cacgaccatg attgagctag
      241 catggttgtg gttacgcaac cagcccgata gtcttttgag tgtctcgttc cgcgagcgcg
      301 ttggaagccg caagggccgc attaaacgca ttgccatcgt tgcgatggca cgccagctac
      361 tgatcgcgct ttggcgctat ctcgagacag gtgtcgtacc tgaaggcgcg gttctcaagt
      421 gcaaatagaa tcgccgcaaa gaggacaaaa agaatgtacc gtttccaagg tgggatgtgt
      481 gatcggttgg tcgcatggct gcaatacgcc gcccgttaga tgggtcccat cccccttgga
      541 gccctatgcc ctcgcaacga tgcaggaggg accttggtac ggactcgatt ccgaccggat
      601 ataagttgat gcggcgagtg ccgcatagcg aagaggggct ccgccttgga tcaattgacc
      661 aaacgtaatc ggcggcactt acgcggaaag aggatcaaca gcaacgcaga acgcagttac
      721 atttgcggcg taatggggcc ccggcaccat tgttgcttgg cacgcgcttt cgccgtcaac
      781 ccctcgcgcc ttccggcgcg cccctccggg ctccgggggt tgaccgctca tcgcggccaa
      841 gcaaggggcc gtccgtgcca tcaatgcaga cttgcgctcg cgtgagcctt ttgaacagaa
      901 ggaagaaagg aatgtttgat cacgaaaaag cctcttgact cgcggcgcct catataagcg
      961 accgaattgg cgcggcgctg caatatgtcg cgaaggcgca gaaggcgaca ttcaagcacg
     1021 tctactggga ccgctcgaac gtgattatgc tgcgctgcat ccccttttcg ggccagtttg
     1081 gcatgacgcg ccagggcgtc agcacctgca gtcgctcgcc gtcgatcctg aagcttcgag
     1141 tttgttcggt gccaacccat tccggattcc aggcaacgtc gaccttggtg atacttgagg
     1201 cggtgcacag ctggctcgag cggtaagcgg aaacgccgaa acagcgtgcc taaaccctac
     1261 gacttcttct ggtctggctt cggcggatcg ggtcggatcg tcaccttgcg gccgtccgtg
     1321 aggtcgacct gcgggttcag gatcacccgg tcgccggcgg cgacacccgt gctcacctcc
     1381 accgaggtgc cgaagtcgcg caccgcggtg atgggccgga tccgcgccgt atcgttctct
     1441 accacggcaa ccgagagccc attgcggttg aagataatcg cctccgacgg cacgatcagg
     1501 gactgcgcct tgcgcgggat cttcaattcc acgcggcaat acatccccgg ggacagcgtg
     1561 tgctccgggt tcggcacgtc gatctcggtc aagagcgtgc gggtgccggg ctgcagcgca
     1621 tccgcgatgc gggcgacgct gccggggaag tcacggcccg ggattt
//
LOCUS       DATILV010000830         1529 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3015474, whole genome shotgun sequence.
ACCESSION   DATILV010000830 DATILV010000000
VERSION     DATILV010000830.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1529)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1529)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1529
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3015474"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..211)
                     /locus_tag="VLJ17_20165"
     CDS             complement(<1..211)
                     /locus_tag="VLJ17_20165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25329.1"
                     /translation="MNVISNIPDSSERYARCIQTSKRVRWDIDKDVIRGRNFDIAHKF
                     LPDGLSLADTFTTLSVDEKRFVSQIQ"
     gene            complement(535..1041)
                     /locus_tag="VLJ17_20170"
     CDS             complement(535..1041)
                     /locus_tag="VLJ17_20170"
                     /inference="COORDINATES: protein motif:HMM:NF016230.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HSV25330.1"
                     /translation="MRHSQNVGQCIHTDLSIRSRCFGHVSRCAGHRRSINWQPTDDRM
                     SRPVRPFYCVQKGLHRIRGGMEWWPRSGSLHFGLGPICRLGQVMIVCSCNVFSDHQLR
                     STLANATQRLRMSQIYDYLGSGAQCGRCAHIIKRIMDEMTNGAIGPVDAMRACTLPKQ
                     RECWKTFP"
     gene            970..>1529
                     /locus_tag="VLJ17_20175"
     CDS             970..>1529
                     /locus_tag="VLJ17_20175"
                     /inference="COORDINATES: protein motif:HMM:NF024260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSV25331.1"
                     /translation="MTKTPASDRKVGMDALSDVLRVAHLTGGVFLHADFFAPWCMAAR
                     VGPEHCAPALGPASHLILYHYVVEGELRIRVDGGDGEGLVLGTGDVVLLPRNDLHLVG
                     SDLTLPPVAGSNIIQPPKDGGLFSIHHGGSGRRTRMICGFLGCDCAEDNPVISTLPSL
                     LKLDAEQGGAAEWIRSTFQYAAEEVAA"
BASE COUNT          309 a          442 c          454 g          324 t
ORIGIN      
        1 cctggatctg actgacgaac cgcttttcat cgaccgacag ggtcgtgaac gtatccgcca
       61 gagaaagccc atctggaaga aacttgtggg cgatatcgaa attgcgcccc cggatcacat
      121 ccttgtcaat gtcccaacga acccgcttgg acgtttgaat gcagcgtgcg taccgttcgc
      181 tgctgtcagg gatattgctg atcacgttca tttcagtctc cttttgcgga gtgggtgcgc
      241 cgatggcaca gacaaaccga tcggctgatg cagcgatctt taggtcgcca gacgggtgag
      301 ggtctatgac cggcccaccg ggagacatgg tcgagacacc gtatcgcggt ggacgcattg
      361 ggagtggctg gcggcggtcg ggcgcgaggc gcgccgcaat gcaccacggc gcgaagaact
      421 cgggcgttca aaagcggcgc aaagcggatt ttgtggacac ccgccggact tatcagtatc
      481 gcactaaatt tccgggtaat cgaagttctt gcgatagccc cggtgcactc tttcctatgg
      541 aaatgtcttc cagcactccc gttgcttcgg caacgtgcag gctcgcattg cgtcaacagg
      601 gccgatcgcg ccgttcgtca tttcgtccat gatccgcttg atgatgtgag cgcagcggcc
      661 gcactgggcg ccgctgccga ggtagtcata gatctgactc atccgcagcc tttgcgtcgc
      721 gttcgcaagc gtggaccgaa gctgatggtc actgaacaca ttgcaagagc agacgatcat
      781 gacttgtcct agccgacata tcgggccaag gccgaaatga agagaaccag aacgaggcca
      841 ccactccatc ccgccacgaa tcctatgaag tcccttctgg acacaataga atggccgaac
      901 cggtcggctc atgcggtcat ctgtaggttg ccagttgatc gagcgtctat gaccggcgca
      961 ccttgagaca tgaccaaaac accggcttct gatagaaagg tcggtatgga tgcattgtcc
     1021 gacgttttga gagtggcgca tttgactggc ggcgttttct tgcacgccga tttcttcgcg
     1081 ccatggtgta tggccgcccg cgtcgggcca gaacattgcg cgcccgctct cgggccagca
     1141 tcgcacctga ttctttatca ctacgtcgtc gagggtgaac tccgtatccg ggtcgacggc
     1201 ggcgatggag agggcctcgt gcttggaacc ggcgacgtcg ttctgttgcc ccgcaacgac
     1261 ctgcacttgg tgggtagcga tctgaccctc ccgccggtag ctggtagtaa tattatccaa
     1321 ccgcccaagg acggcgggct gttctcgatc catcacggcg gcagtggaag acgcacacgg
     1381 atgatctgcg ggttcctcgg ctgcgattgc gccgaagaca atccggtgat ctcgaccttg
     1441 ccgtcgctgc taaaactcga tgccgagcaa ggtggggccg cagaatggat ccgctcgacc
     1501 ttccaatatg ctgccgagga ggtcgccgc
//
LOCUS       DATILV010000831         3493 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3523222, whole genome shotgun sequence.
ACCESSION   DATILV010000831 DATILV010000000
VERSION     DATILV010000831.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3493)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3493)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3493
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3523222"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..494
                     /locus_tag="VLJ17_20180"
     CDS             <1..494
                     /locus_tag="VLJ17_20180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25332.1"
                     /translation="SHNIYDIIPDSQNNVYFTDFAQQHIGRVDAKTGQTTLFELPTKA
                     SAPRRGMMDAHGRIWFGLYRGNKIDMFDTKTEKFKEWEMPTAYSSPYDVTIDKNGEVW
                     TGSMLNDRISRLNPETGTFVEYLLPRETNVRRVYVDNSTTPVTFWVGNNHQGSIVKLE
                     PLN"
     gene            560..2221
                     /locus_tag="VLJ17_20185"
     CDS             560..2221
                     /locus_tag="VLJ17_20185"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HSV25333.1"
                     /translation="MRTRASTFTAAVAAICFALPYTAAAEAPVALSGQVSSAKEGAME
                     GVVVSAKKANSTITISVVTDEKGRYSFPAERLKPGHYTLSARAVGYDIDGPKDADVAT
                     EQVTTVDIKLTPTRNLPGQLTNAEWMLSVPGSDEQKAFLLGCNGCHTVERIVKSVHDA
                     DEFLQIFQRMGGYYPGSTPQKPQRLVGEVLREVGRGGDNAKKNAEWLSTINLSQQESW
                     SYALKTLPRLTGKSTHVIITEYDLPNRLIQPHDVMLDREGTVWYSDFGQMFLGKMDAK
                     TGKVTQYPIPETKKGFPVGTLNLEFDKNDNPWVGVMYQSAIAKFDKKTETFQTWSTPK
                     EWDTDAGQLGHLALEGTPVDSNVWIKNSDGGNIYRLNLDSNQIENLGAFKDPRTGRRI
                     GTYGLHSDAQNNIYLLDFAAGNIVKVDAKTKSPTVYLTPTPNSRPRRGRVDAEGRLWF
                     AEYNGNAIGMFDPRTEKISEWKVPTPWSAPYDAQAGRNGEAWTGSMLTDRVARLDIKS
                     GQYTEYQLPHPTNIRRVYIDDSKSPGTLWVGNNHGASIVKVEPLD"
     gene            2531..>3493
                     /locus_tag="VLJ17_20190"
     CDS             2531..>3493
                     /locus_tag="VLJ17_20190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004677283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flotillin family protein"
                     /protein_id="HSV25334.1"
                     /translation="MDPQITTFALVVAIIVALLVIVFMSGCIIYIPNNRIGVLEKLWS
                     LRGSIRDGFIACSGEAGFQPDVLRGGFHFFLPFQYRVHPAPLVTIPQGQIGYVFARDG
                     IALAPTQTLASNTDANDYEDVRGFLTGAGQKGPQRKILREGTYALNLAQFVVLTSERT
                     YAISMAPSEMDLFREMSEVIAQRQGFQPVVIKDADDVIGIVTVHDGPALREGEIIAPS
                     VGNEAGGPNFHNNFQDPEAFLRAGGFRGRQHQVLVDGSYYLNRLFATIELVDKTIIEV
                     GTVGVVVSYTGERGVDLSGVEYRHGEAVEPGFRGVWNKPLLPGKY"
BASE COUNT          734 a         1098 c         1007 g          654 t
ORIGIN      
        1 agtcccacaa catctacgac atcatcccgg actcccagaa caacgtctac ttcaccgact
       61 tcgcgcagca gcacatcggc cgggtcgacg ccaagaccgg ccagaccacg ctgttcgagt
      121 tgcccaccaa ggcttcggcg ccgcgccgcg gcatgatgga tgcccacggc cgcatctggt
      181 tcggactcta tcgcggcaac aagatcgaca tgttcgatac gaagaccgag aagttcaagg
      241 aatgggaaat gccgaccgcc tattcgtcgc cttatgacgt gacgatcgac aagaacggcg
      301 aagtatggac cggctcaatg ctcaatgatc gcatctcgcg gctcaatccg gagaccggca
      361 cgttcgttga gtacctgctg ccgcgcgaga ccaacgtccg acgggtttac gtggataatt
      421 ccaccacgcc tgtgacgttc tgggtcggca acaatcacca gggttcgatc gttaagcttg
      481 agccgcttaa ttaagcgaca atggcgcctc acctctcctc gaggcggggt gagcgccaaa
      541 ctccaccaag gaggcatcca tgcgcacacg cgcgtccacc ttcaccgccg ccgtcgcggc
      601 catttgcttt gccctgcctt atacggccgc cgcggaggct cccgttgcac tttccggcca
      661 ggtctcgtct gccaaggaag gcgccatgga aggcgtcgtc gtcagcgcca agaaagccaa
      721 ctcgacgatc actatctcgg tggttaccga cgaaaagggc cggtatagct ttccggcgga
      781 gcggctcaaa cccgggcatt acacgctcag cgcccgcgcg gtcggctatg atatcgacgg
      841 ccccaaggac gccgacgtgg ccaccgagca ggtgaccacc gtcgacatca agctcacgcc
      901 cacccgcaac ctgcccgggc agctcacgaa tgccgaatgg atgctgagcg tcccaggctc
      961 cgacgagcag aaggcgttcc tgctgggctg caacggctgc cacaccgtcg agcgcatcgt
     1021 gaagtcggtg cacgacgccg acgaattcct ccagatattt cagcggatgg gcggctatta
     1081 tccgggcagc acgccgcaga agccgcaacg gctcgtgggc gaggtgcttc gcgaggtcgg
     1141 ccggggcggc gacaatgcca agaaaaacgc cgaatggctg agcacgatca acctcagcca
     1201 gcaggagagc tggagctatg cgctcaaaac cctgccgcgg ctcaccggca aatccactca
     1261 cgtcatcatc acagaatacg acctgccgaa tcggctgatc cagccgcatg acgtgatgct
     1321 cgatcgcgag ggtaccgtct ggtactccga tttcggccag atgtttctcg gcaagatgga
     1381 cgcgaagacc ggcaaggtga cccaatatcc gattccagag accaagaaag gctttccggt
     1441 cggcacgctc aatcttgaat tcgataagaa cgacaatccc tgggtcggcg taatgtatca
     1501 aagcgccatc gccaaattcg acaagaagac cgagaccttc cagacctggt cgaccccgaa
     1561 ggaatgggac acggacgccg gccagctcgg gcaccttgcg ctcgaaggta cgccggtcga
     1621 cagcaatgtg tggatcaaga attcggatgg cggaaacata tatcggctta atctcgactc
     1681 gaaccagatt gagaatcttg gcgccttcaa ggatccgcgc accggcaggc gcatcggcac
     1741 ttacggcctg cattccgacg cccagaacaa catctatctg ctcgacttcg cggccggtaa
     1801 catcgtcaag gttgatgcca agacgaagtc acccaccgtc tacttgacac cgaccccgaa
     1861 ctcgcgtcca cggcgcgggc gcgtcgacgc cgagggccgt ttgtggtttg ccgaatacaa
     1921 tggcaacgcc atcgggatgt tcgacccgag gaccgaaaag atttcggagt ggaaggtgcc
     1981 gacgccgtgg agtgcgcctt atgacgccca ggctggccgc aacggcgagg catggaccgg
     2041 ctccatgctg accgatcggg tggcgcgcct cgacatcaag agtggtcagt acaccgagta
     2101 tcagttgccg cacccgacca atatccggcg cgtctatatc gacgattcga agagcccagg
     2161 tacgctgtgg gtcggcaaca atcacggtgc ctccatcgtc aaggtggaac cgctggactg
     2221 acgtcgatcg cgttccgatg cgatcgaatc acctcgccgc cgtcatgccc gcgcagagac
     2281 accccgccgc gtcgcgcggc ggggaccccc gtctttgcgg gcatctaggt ctttgttgcg
     2341 cgagcttagc agtcaagacc tagaacgccc cggatcaagt ccgaaggcga cccggccttg
     2401 tgcgggctac tttcgatttg ggccttccag caccgccgtc agggcctggt gcgcgatatt
     2461 gctttccgct tcggattgtg agcaacgatc atccattacg cccacgcatt ctgatcacgg
     2521 aagagtcacc atggacccgc aaatcaccac gtttgccttg gtcgtcgcca taattgttgc
     2581 cctgcttgtg attgttttca tgagcggctg catcatctac atccccaata atcgaatcgg
     2641 cgtgttggag aagctgtgga gcctgcgcgg ctccatccgt gatggattca ttgcctgttc
     2701 gggcgaggcg ggctttcagc ccgacgtttt gcgcggcggc tttcattttt ttcttccgtt
     2761 tcagtatcgc gtgcatcccg ccccgctcgt caccatccca caagggcaga ttggctacgt
     2821 cttcgcacgc gacgggatcg ctcttgcgcc aacgcaaacg ctcgcatcca acaccgacgc
     2881 caatgattac gaggacgtcc gcggctttct gaccggcgca ggccaaaaag ggccgcagcg
     2941 caagatcctg cgcgaaggca cgtatgcgtt aaacctcgcc cagttcgtcg tgctcacttc
     3001 cgagcggacc tacgccatca gcatggcgcc aagcgagatg gacctcttcc gggaaatgtc
     3061 cgaggtgatc gcgcaacgac agggtttcca gccggtcgtt atcaaggacg ccgacgacgt
     3121 cattggcatc gttacggttc acgacgggcc cgctctacgt gagggcgaga tcattgcccc
     3181 cagtgttggc aacgaggccg gcggtcccaa cttccacaac aactttcagg atccggaagc
     3241 gtttctgcgt gccggagggt ttcgcgggcg ccagcatcaa gtgctggtcg atggcagcta
     3301 ttatctcaat cggctgttcg ccacgatcga gctcgttgac aaaacgatca tcgaagtcgg
     3361 cacggtcggc gttgtcgtat cctacacggg agagcgcggt gtcgatcttt cgggtgtcga
     3421 ataccggcat ggcgaggcag tcgagcccgg cttccgcggc gtatggaaca agccgttgct
     3481 gccgggcaag tac
//
LOCUS       DATILV010000832         3769 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1998011, whole genome shotgun sequence.
ACCESSION   DATILV010000832 DATILV010000000
VERSION     DATILV010000832.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3769
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1998011"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            198..1028
                     /gene="pcaD"
                     /locus_tag="VLJ17_20195"
     CDS             198..1028
                     /gene="pcaD"
                     /locus_tag="VLJ17_20195"
                     /EC_number="3.1.1.24"
                     /inference="COORDINATES: protein motif:HMM:NF015081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047570 - 3-oxoadipate enol-lactonase
                     activity [Evidence IEA];
                     GO_process: GO:0042952 - beta-ketoadipate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoadipate enol-lactonase"
                     /protein_id="HSV25335.1"
                     /translation="MRQAVGEIELYYELHGDIGNDARPWLIFSHSLACNSAMWRPQLA
                     EFARDYRVLAFDTRGHGRSDVPAGPYTMEVLAEDAHCLLRELGIHNAHFAGLSMGGMI
                     GQTLTLGHPDSIASLTIADSTSRWPAEAIGVFAQRSQTALQSGMAPLVDATLARWFTP
                     EFRESNIDEVARIGDMILHTPVAGYVGCSEAIPRINLTHRLREITCPILVIVGDRDPG
                     TPVSMSQEIHKNAPGSELVIIEHAAHLSNVEQPAVFNQTLRRFLDRAGATTERRARPT
                     "
     gene            1138..2112
                     /locus_tag="VLJ17_20200"
     CDS             1138..2112
                     /locus_tag="VLJ17_20200"
                     /inference="COORDINATES: protein motif:HMM:NF015445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HSV25336.1"
                     /translation="MTAWLPGGSDNASAQAMTLKLGHALPGGDHPYQLGAQKFAELVS
                     AKTGGRVKVEIFHSAQLGGERDMVEGLKIGTLDLVVTASPIAGAIANDRKVFLLDIPY
                     VFKDYDALTRVLEGDIGKEMTKNWPQHGFRSIGYFIAGFHQLANSKRPITRPDDLKGM
                     KIRAIQSKSSILMIEALGATPVPMAFPEVYTGIQQGVVDGFANSMTTLYTAKYYEVAP
                     YISITNHLVGMLNLVMSEALYQKLSPADRKAVEDAGLEAARFQRNLYKEGDQKYLALL
                     KEKAKVNTDVDTAAFRKNVESYVPKFVELVNEPGAKELAERLLSEGRQ"
     gene            2109..2600
                     /locus_tag="VLJ17_20205"
     CDS             2109..2600
                     /locus_tag="VLJ17_20205"
                     /inference="COORDINATES: protein motif:HMM:NF016200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HSV25337.1"
                     /translation="MNELPLGSRLVRLLVATERGVIGGLMAAIVVLTLAQVIWRYVLG
                     NPLQWSEEVARYCFVWVTLLGASALLRVSDGHPRIDSLCHLGGRHVRSALELFSRAMV
                     ILCSAAIAFGGLRMMQLNWQQRSPSLEIPMSWIYLSMLVAPLLGVFWTLWCGAHGCVE
                     DDA"
     gene            2597..>3769
                     /locus_tag="VLJ17_20210"
     CDS             2597..>3769
                     /locus_tag="VLJ17_20210"
                     /inference="COORDINATES: protein motif:HMM:NF018513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HSV25338.1"
                     /translation="MSVAVLLAVFLVLMAAGVPIAFALGLAGIAMAAAIPDFSILTAL
                     TLFAQRLFVGIDVFLLLAIPLFILAGSLMEVGGTARRLVDFASALVGWLPGGLGFVTV
                     VSGMFFAGVSGSASADTAAVGSVMIPAMKRKGYDAPFAAALTAGAGALGPIIPPSVLM
                     VIYGAMGNVSIAALFLGGFIPGILIGVGLMGLVYAMARIRNYPSEDRVGLKEIVARFF
                     HAFLALFMPIIILGGIFAGVFTATESAAVAVAYALVIGVFVYRELRWSQIPKLLYRTG
                     LVSAKVMFLIATATFVGFLLAHQKIPQAIAEHLLGVAHESWLVLLLINVTMLLAGCIL
                     EVAAALIILGPVLIPVVQTLGIDLVHFGVVMVVSLAIGTIHPPVGNCLYIVSALSGA"
BASE COUNT          690 a         1110 c         1170 g          799 t
ORIGIN      
        1 gccgcctgcc gccgcgacga cctcgagcat ccgtagcccg cgtcccaggg acaagtgggt
       61 cgaacgggct gcagcggcgg ccgggcggcg ttcaatcata tcgaatactg tttgcacatg
      121 tgttcgtgtc agtagaatcc acgcaccata cgctgtcaag atgaaagcgc ttccggagcg
      181 ccctgtcagg gagtgagatg cgacaagctg tcggggagat cgagctctac tacgaattgc
      241 atggcgacat cggaaacgac gcccgcccat ggctgatatt cagtcattcc ctcgcctgca
      301 attccgcgat gtggcgcccg cagctggcgg aattcgctcg cgactaccgc gtgcttgcat
      361 tcgacacccg ggggcatggg cgcagcgacg tgccggcagg tccctacacg atggaagtgc
      421 tggcggagga tgcgcattgc ctcttgcgcg agctcggcat tcacaatgcc catttcgcag
      481 gcctttccat gggcgggatg atcggccaga ccttaacatt gggtcatccc gattcgatcg
      541 caagcttgac gattgcggac agcaccagcc gctggccagc ggaggcgatc ggcgtattcg
      601 cacaacggtc gcagacggcg cttcaatcgg ggatggcgcc gctggtggac gcgacgctcg
      661 cgcgttggtt cacccctgag tttcgcgaga gcaatatcga cgaggtggcg cgaatcggcg
      721 acatgatcct gcacaccccg gtggccggtt acgtgggttg cagcgaggcc atcccgagga
      781 tcaacctgac gcatcgcctg cgcgaaatca cgtgcccgat attggtcatc gtgggcgacc
      841 gcgatcccgg aacgccggtt tcgatgtcgc aagaaatcca taaaaacgcc ccggggtcgg
      901 agctcgtaat catcgagcac gcggcccatt tgtccaatgt ggagcagccc gccgtattca
      961 accagacgct gcggcgtttt ctggatcggg caggagcaac gaccgaacgc agggctcgac
     1021 cgacgtagcg ccaatcgcag tcacgggagg acgttcatga acccagcaac gacctggatg
     1081 aaccgatatc ggctgtcaat gcttcaaagg atgacactgt gcgcactcgc gctgccattg
     1141 acggcgtggc tgccgggagg cagcgacaac gccagcgccc aagccatgac cttgaaactc
     1201 ggccatgcgt tgcccggcgg cgatcatccc tatcagctgg gtgcgcagaa gtttgcggaa
     1261 ctcgtctctg ccaagactgg cgggcgagtc aaggtcgaga tcttccattc cgcgcagctc
     1321 ggtggcgagc gagacatggt cgaagggctc aagatcggca ccttggatct tgtcgtgacg
     1381 gcgtccccca ttgccggcgc aatcgcgaac gatcgcaagg tgttcctgct ggatattccc
     1441 tacgtgttca aggactacga cgcgctcacg cgcgtgctcg agggagatat tggcaaggag
     1501 atgaccaaaa actggccgca gcacggtttc cgcagcatcg gctatttcat cgcgggcttt
     1561 caccagctcg cgaactccaa gcggccgatt acccggccgg acgacctcaa gggcatgaag
     1621 atacgcgcga ttcaatcgaa gtcgtcgata ctgatgatcg aggcgctggg cgcaacgccg
     1681 gtgccgatgg ccttccccga ggtatatacc ggaatccagc agggcgtggt cgacggcttc
     1741 gccaactcga tgaccacgct ctacaccgcg aagtactacg aagtggcgcc gtacatttcg
     1801 atcaccaatc atctggtcgg catgctcaat ctcgtcatgt ccgaagcgct gtaccagaag
     1861 ttgtcgccgg cagatagaaa ggccgtcgaa gatgccggac tggaagccgc ccgtttccag
     1921 cgcaatctct acaaggaagg cgaccagaaa taccttgcgc tgttgaaaga gaaggccaag
     1981 gtgaacaccg acgtcgatac tgctgcgttc cgaaagaacg tggagagtta cgtccccaag
     2041 tttgtggaac tggtcaatga gccgggggcc aaggagctcg ccgagcggct gctcagcgaa
     2101 ggccggcaat gaacgaactg ccgttgggca gccggctggt caggctgctc gtggcaacag
     2161 aacgcggcgt catcggcggg ctcatggccg ccattgttgt gcttaccctg gcgcaagtga
     2221 tctggcgtta cgtgctcggc aatcctctgc agtggagcga ggaggtcgcg cgctattgtt
     2281 ttgtgtgggt gaccttgctc ggggcgtcgg cgttgcttcg cgtgagtgac ggccatccgc
     2341 ggatcgattc gttgtgtcat ctggggggcc ggcatgttcg aagtgcgctc gagctgttca
     2401 gtcgcgcaat ggtgattctt tgcagcgccg caatcgcctt cggggggctg cgcatgatgc
     2461 aactcaattg gcaacagcgc tcaccgtcgc tcgagatacc catgtcatgg atttacctga
     2521 gcatgctggt ggctcccctg ctgggagtgt tctggacgct ctggtgcggc gcccacggtt
     2581 gcgtcgagga tgatgcgtga gcgttgctgt tctacttgcg gtgttcctgg tgttgatggc
     2641 tgctggcgtt cccatcgcgt ttgcactggg actggcgggc attgcgatgg cagccgccat
     2701 tccggacttt tccatcctga cggcactgac gctgttcgcg cagcgattgt tcgtcggcat
     2761 tgacgtcttt ctgctgctgg cgattccgct attcatcctt gccgggtcgc tcatggaggt
     2821 cggcggaacc gcgcgccgcc tggtcgattt cgcatccgca ctggtcggct ggctgccggg
     2881 tggcctggga ttcgtaactg tcgtgagcgg gatgtttttt gccggcgtat ccggatcggc
     2941 atccgccgat actgccgccg tcggttcggt gatgatcccg gcgatgaagc gcaagggata
     3001 cgatgccccc ttcgcggcgg cactgaccgc aggcgccggg gcgctgggcc cgatcattcc
     3061 tcccagtgtc ctgatggtga tctatggcgc catgggaaac gtgtccatcg ctgcgctgtt
     3121 tctcggcggg ttcatcccag gaatactcat tggcgtaggt ttgatgggcc tcgtgtacgc
     3181 aatggcacgc attcgtaact accccagcga agatcgcgtc ggactcaagg aaattgttgc
     3241 ccgattcttc cacgcatttc ttgcgctttt catgcccatt atcattcttg gaggaatatt
     3301 cgccggcgtg ttcaccgcca cggaatctgc cgccgtggca gtcgcctatg cgctcgtcat
     3361 cggggtgttc gtctaccggg agttgcgctg gtcacagatt cccaagctgc tgtacaggac
     3421 cggcctggtc agcgccaaag tcatgttcct gattgccacg gccacctttg tcggatttct
     3481 gctcgcccac cagaagattc cgcaagccat cgcagaacat ctgctcggcg ttgctcacga
     3541 atcgtggctg gttttgctgc tgatcaatgt gacgatgctc ctggccggct gcatcctcga
     3601 agtggcggcc gcgctgatca tcctgggccc cgttctcatt cccgtagtgc aaaccctggg
     3661 gatcgacctc gttcatttcg gtgtagtgat ggtggtcagc cttgcaatag gcacgattca
     3721 ccctccggta ggcaattgtc tatacatcgt gtccgccttg agcggcgcg
//
LOCUS       DATILV010000833         3956 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3276524, whole genome shotgun sequence.
ACCESSION   DATILV010000833 DATILV010000000
VERSION     DATILV010000833.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3956)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3956)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3956
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3276524"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..390)
                     /locus_tag="VLJ17_20215"
     CDS             complement(<1..390)
                     /locus_tag="VLJ17_20215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV25339.1"
                     /translation="MSEPSSDNWIRSLFPFVVMCFGGFMALLDIQIVASSLQHIGGGL
                     SAAQDEISWLQTAYLIAEIIVIPLSGWLTRVFSTRWLFTASAAGFTATSMLCGLAWDI
                     HSMILFRALQGAWGASMIPIVFTSSLHY"
     gene            complement(402..1487)
                     /locus_tag="VLJ17_20220"
     CDS             complement(402..1487)
                     /locus_tag="VLJ17_20220"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HSV25340.1"
                     /translation="MDALTKWSAPVATKVRRRLTFKQLALLAFACVAAVSGSGYGYYW
                     WTTGRLIESTNDAYVGGNVTPISPHIAGFVAEILVTDNQRVDAGQVLVRLDDRDARAA
                     AEHAEAVLHQRTAMLASLRAKYALQQSAIQQAAADLDAKVAQASFAKLDAERYQTLAL
                     SDSGSRQNAERTRAQDQAARAAVASTQAALAAANQQLSVLAANIDEAAAAVAQAQADL
                     QTAGLNLGYAEIRSPISGYVGNRAARVGAYVSQGTYLLTIVPAHGLWVDANFKEDQLA
                     RMQPGQPATIVADTLPGNVFHGHVLSLAPATGAVFSVIPPENATGNFTKIVQRVPVRI
                     ALDDEDASLGRIRPGLSTVATVDMRSQ"
     gene            complement(1566..2030)
                     /locus_tag="VLJ17_20225"
     CDS             complement(1566..2030)
                     /locus_tag="VLJ17_20225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018045882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HSV25341.1"
                     /translation="MPTVTLPGPEDCNCFAVRSAARHVTQLYDQLLAPVGLRVTQFSI
                     LAKLRRRGPLTINALAEDMVMDRTTLGRNIQPLERDGLIRIEPAPSDRRAKELHLTNA
                     GEKRLQAGREAWARAQARFEASFGTKRAAELRMLLRAAVATQFAPTGQDARQ"
     gene            2182..2931
                     /locus_tag="VLJ17_20230"
     CDS             2182..2931
                     /locus_tag="VLJ17_20230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009026010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSV25342.1"
                     /translation="MSKLAGKIALVTGGNSGIGLATAKAFVGEGAYVFITGRRATELD
                     TAVKEIGRNVTGVPGDVSKLGDLDRLFGRIRREKGRLHTVFANAGVAKYSALGEITED
                     LYEELFSINVKGLLFTVQKALPLLPDGAAIILTSSIVGSKGLAANSVYAATKAVARSF
                     ARTWTTDLKHRRIRVNAISPGSINTPGLTNLLASSQVGEERRKIIAAATPLGRLGTPD
                     EVAKAAVFLASDDASYITGTELFVDGGFAQV"
     gene            2971..3438
                     /locus_tag="VLJ17_20235"
                     /pseudo
     CDS             2971..3438
                     /locus_tag="VLJ17_20235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018329909.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
     gene            complement(3606..>3956)
                     /locus_tag="VLJ17_20240"
     CDS             complement(3606..>3956)
                     /locus_tag="VLJ17_20240"
                     /inference="COORDINATES: protein motif:HMM:NF025063.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
                     /protein_id="HSV25343.1"
                     /translation="MIETRNTPSRSGHIIASGGVEPIALPARSPNLNAYAERWVRSVK
                     EECLCKVILFGERSLRRALSENVEHYHVERNHQGKGNVLLFPRDTDIRHQQQPVRCRE
                     RLGGLLRYYHQEAA"
BASE COUNT          800 a         1177 c         1216 g          763 t
ORIGIN      
        1 gtagtgcaag gatgatgtga agacgattgg aatcattgag gcgccccacg ctccttgcag
       61 tgcgcgaaag aggatcatgc tgtggatgtc ccacgcgagc ccgcacagca tgctggtggc
      121 cgtgaagccg gcggccgatg cggtaaaaag ccatcgcgtg gagaagaccc gcgttagcca
      181 gcccgagagg gggatcacaa tgatctcggc aatcaggtag gccgtctgga gccagctgat
      241 ctcgtcctgg gccgccgaca gcccgccgcc gatgtgttgc agggaagacg caacaatctg
      301 gatgtccagc agcgccatga aaccgccgaa gcacatgacc acgaagggaa acaggcttct
      361 gatccagttg tcggaggagg gttcgctcat ttcggcctcc gttattgcga tcgcatgtct
      421 acggttgcga ccgtggaaag acccggtctt atcctcccca acgacgcatc ttcatcatcg
      481 agagcgatcc ggaccggaac tcgctgcacg atcttggtga aattgccggt cgcgttctcc
      541 ggcgggatca cgctgaaaac agcgccggtc gccggggcga ggctgaggac gtggccgtga
      601 aagacattgc ccggcagcgt gtcggcaaca atggtcgccg gctgcccggg ttgcattcgc
      661 gcgagctggt cttccttgaa attcgcatcg acccagaggc cgtgcgccgg aacaatggtc
      721 agcaggtagg tgccttgcga cacataggcg ccgacccgag cggcacggtt gccgacatag
      781 ccgctaatgg gtgaacggat ttcggcatag ccgagattga ggccggcggt ctgcagatcc
      841 gcctgcgcct gcgcaaccgc agccgcggcc tcgtcaatgt tggcggcgag cacgctgagc
      901 tgctgattgg cggcagcaag cgcggcttgc gtcgatgcca cggctgcccg tgccgcctga
      961 tcttgggcgc gtgttctttc cgcgttttgc cgggagccgg aatccgaaag agcaagggtt
     1021 tgataccgct cagcgtccaa tttcgcaaaa ctggcctggg ctaccttggc atcaagatct
     1081 gcggcggcct gttggatcgc cgactgctgt agcgcgtatt tggcgcgcaa actggccagc
     1141 atcgctgtgc gctggtggag gaccgcttcg gcatgttcgg cggcggcgcg ggcatcgcga
     1201 tcatcgaggc gcaccagcac ctgtccggca tcaactcgct gattatcggt gaccagaatc
     1261 tccgcgacga agccagcgat gtgcggagaa atcggcgtaa cgttcccgcc tacataggca
     1321 tcgttggtgc tctcgatcaa acggcccgtt gtccaccagt aatagccgta gccggagcct
     1381 gacacggcag caacgcaggc gaaggcaagc agggcgagct gcttgaacgt caatcgccgc
     1441 cttaccttgg tggcgaccgg tgcgctccat ttcgtcagtg cgtccatgat caacctcacg
     1501 gtaaaggagt atatgcacct atatgcccgc gcttaacctc atgcccatag gacggggttt
     1561 tcctctcact gccttgcgtc ttgaccggtt ggcgcgaatt gggtggcaac ggccgcccgc
     1621 aacagcatgc gcagctcggc agcccgcttg gtcccaaagc ttgcttcgaa gcgcgcttgc
     1681 gccctagccc aggcctcacg gccggcttgt agccgtttct cgccagcgtt ggtcaagtga
     1741 agctcctttg ctcgccggtc ggatggggcc ggttcaattc tgatcagccc gtccctctct
     1801 agcggctgga tgttccgccc aagcgtcgtg cgatccatca ccatgtcctc agcgagcgca
     1861 ttgattgtca gcggaccccg gcgcctgagc ttcgccagga tagaaaactg ggtgacccgc
     1921 aatccgacag gtgccagcag ctgatcgtag agctgggtta cgtgccgagc cgcggatcgg
     1981 acagcgaagc agttgcaatc ctcaggtccc ggcagtgtta cggtcggcat ctttcatcct
     2041 cattccttga caaaggtgca tatgctccta tatacgcgca tatgcgcata tgtcaagcca
     2101 ggtggaattc gaaaatagtc gcacgttatt cagcgcgctc atgaaaggac gcgaacagac
     2161 taaaaataaa ggagaaatgc cgtgagcaag cttgcaggaa aaatcgcgct cgtcaccggc
     2221 ggcaacagcg ggattggact tgcgaccgcg aaggcttttg tcggtgaagg ggcgtacgtc
     2281 ttcataaccg ggcgccgagc gacagagttg gacacagcgg tcaaggagat aggaaggaac
     2341 gtaaccggcg tcccagggga cgtgtccaag ctcggcgatc tcgaccgcct gttcggccgg
     2401 atcaggcgcg agaaaggaag gctgcacacc gtgttcgcca acgccggcgt ggcgaaatat
     2461 tcggcgctgg gcgagatcac cgaagatttg tacgaggaac tattcagcat caacgtgaaa
     2521 ggcctgcttt tcacggtcca aaaggcgctg cctttgctgc cggacggcgc cgcgatcatc
     2581 ctgacttctt caattgtcgg aagcaaagga ctagcggcta acagcgtcta tgccgccaca
     2641 aaggctgtcg cgcggtcctt cgcgcgcacc tggacgacgg acttgaagca tcgccggatt
     2701 cgcgtgaacg cgatcagtcc gggttctata aacacgccag gcctcaccaa tctgttggca
     2761 tcgtcgcaag tgggcgagga gcgccgcaag atcattgcgg ccgctacgcc gcttggcagg
     2821 cttggaacac ccgacgaagt cgccaaagca gcggtgttcc tcgcgtccga cgacgccagc
     2881 tacatcacgg gaaccgaatt gttcgtcgat ggtggcttcg cgcaggtctg agactcaatc
     2941 atccaatctt gctctctcag gaggcttgtc atgacatcgc agcattcagt tgttttcgca
     3001 gaacccgttc gcaccgcaat cggcaccttt ggcggcagcc tcaaggacgt gccggctccc
     3061 aatctcggcg ctgtcgcgat tagcgccgcg gttgttcgcg cgaaacttcg tcctgatgag
     3121 gtggaaacga ttgtcatggg caatgtcgtg caggcgggca ccaagatgaa tccggctcga
     3181 caagctgccg tccatgccgg actgccggtc acgatcccgg cgctcacggt caaccgcgtc
     3241 tgcggctcag gcgcgcaggc catcgtctcg gcagcgcagg aaattctcct gggcaacatc
     3301 aatgtcgcgg tggcgggcgg catggagaat atggatcagg cgccttatct cgtcgctcgc
     3361 gggcgctggg gctatcgcat gggcgacggc gcgctctacg acagcgtgct gcgcgatggg
     3421 ttgaacgacg ccttctcgga cgccgaatgg tcaaaaaatt ggaacggcgg aagaacccgc
     3481 agttcaaggt tcaaggagcc gatagagttt accagagttg ggaaagggct agcaatgcga
     3541 cttcctcgat ctcccgatcg cagcgcgtag aactcagagc tcggaatgga tccttgagcg
     3601 tgcgatcacg ccgcctcttg atggtaatag cgcagcagcc cacccagtcg ctcgcggcac
     3661 cgaacaggct gctgctggtg gcggatgtcc gtgtcacgag gaaacagcag gacgttgccc
     3721 tttccctggt gattgcgctc aacatgataa tgctcgacgt tttcgctcag cgcccgccgc
     3781 agggaccgct cgccgaacag gatcaccttg cacaagcact cttccttcac cgacctgacc
     3841 cagcgctccg cataggcatt caagttcggg ctgcgcgcag gcagcgcgat cggttcaacc
     3901 ccacccgacg caatgatgtg cccggaacga ctgggtgtat ttcgtgtctc gatcat
//
LOCUS       DATILV010000834         2087 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_5057482, whole genome shotgun sequence.
ACCESSION   DATILV010000834 DATILV010000000
VERSION     DATILV010000834.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2087
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5057482"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1318
                     /locus_tag="VLJ17_20245"
     CDS             <1..1318
                     /locus_tag="VLJ17_20245"
                     /inference="COORDINATES: protein motif:HMM:NF014073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HSV25344.1"
                     /translation="WLGVRDVGRHWWLVLRCGILGTGLGAIPGIGSAVIDWIAYGYAQ
                     RTEKNPETFGSGDVRGVIAPESSNNAKEGGHLVPTIAFGVPAGASMAILLGAFLMHGL
                     TPGPEMLTKQLDVTYTIVWSLTLAHIIGAVICLFACPWLARVSTVRPEILLPIVLSLV
                     FVAAYEGSHDWGDLYSVMIFGGIGWIMKRLAWPRPPLVVGLVIGGIFERYLYISTSLY
                     GIGWLWRPVVLVILALVAWALYRPLSEIVRSVAAELRHIGSHPLRVSASAVFTVAIIL
                     FIFAAIMLSTDWPAAAKPVPLTACGMALTAATLNLINELFGNEPTVRGNVDGGVATGG
                     HGPVVDRNFGMSEATIRRQAAIYFVWLVGLLGLVAVVGFIPAIALFIFGYMHFGFKES
                     PVNAAIYAVATTLLCWGLFHKLLAVAWPQSLLGDFFPAWRAALGFI"
     gene            1341..1928
                     /locus_tag="VLJ17_20250"
     CDS             1341..1928
                     /locus_tag="VLJ17_20250"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSV25345.1"
                     /translation="MTGLYEQSPGQGHNRPPVEDKEGKWERWSKKRTFVRELAGTYSD
                     VYKSLLEQPRVYSSRNHPWKGGPALYGKHVVSPQAANVVQSIETHIECYAPGAYGQKH
                     GHLNSAVFYVLKGRGHDIHDGRRIEWKAGDIMIVECASVHQHFNDDPDNEAILLVFKA
                     KPLFLFMHLLFQKIVSYPPNEAAPGHENFRPPKDL"
BASE COUNT          347 a          626 c          639 g          475 t
ORIGIN      
        1 atggttgggc gtgcgggacg tcggccgaca ttggtggttg gtgctgcggt gcggcatcct
       61 cggcaccggg ctcggcgcga tcccgggcat cggatcggcg gtgattgact ggatcgccta
      121 tgggtacgcc caacgcaccg aaaaaaatcc cgagaccttc ggcagcggcg acgtgcgtgg
      181 cgtgatcgca ccggaaagct ccaataacgc caaggagggt ggccatctgg tcccgaccat
      241 tgcgttcgga gttccggccg gcgcctcgat ggcgattctg ctcggcgcat ttctgatgca
      301 cggactgacg cccggtcccg agatgctgac caagcagctc gatgtgacct atacgatcgt
      361 ctggagcctc acgcttgccc atatcattgg cgcggtgatc tgcctgttcg cctgcccctg
      421 gctcgcccgc gtctccacag tgcggccgga aatcctgttg cccatcgtgc tgtcgctcgt
      481 cttcgtcgct gcctatgagg gctcgcacga ctggggtgac ctctattcgg ttatgatctt
      541 cggcgggatc ggctggatca tgaaacggct cgcttggccg cgccctccgc tggtcgtcgg
      601 cctcgtcatc ggtggcattt tcgaacgcta tctttacatc tcaacgtcgc tgtacggcat
      661 cggctggctg tggcgccccg tcgtcttggt gatcctcgca ttggttgcct gggcgctcta
      721 tcggccattg tccgagatcg tcaggagtgt tgccgccgaa ttgcggcata tcggctcgca
      781 tccgttgcgg gtttcggcct cggcggtctt caccgtggcg atcatcttgt tcatcttcgc
      841 ggcgatcatg ttgtcgaccg attggccggc ggccgccaag ccggtcccgc tcaccgcatg
      901 cggtatggcg ctgactgccg caacactcaa tctcatcaac gagctgttcg gcaacgaacc
      961 taccgttcgc ggcaacgtgg atggtggcgt tgcgaccggc ggacatggcc cggtcgtaga
     1021 tcggaatttc ggtatgtccg aggcaacgat ccgccgtcag gccgcgatct attttgtttg
     1081 gctggtcggc ctgttggggc ttgtcgctgt cgtcggcttt attccggcga tcgcgctttt
     1141 catttttggc tatatgcatt tcggtttcaa ggaatcgccc gtaaacgcgg ctatttatgc
     1201 ggtagcgacg accctgctgt gctggggatt gttccacaag ctgctggcgg tggcgtggcc
     1261 ccaatcgctg ctgggtgatt ttttcccggc gtggcgcgcg gcgcttggtt ttatctgatg
     1321 ggtaagcgaa ggagcgacgg atgaccggcc tttatgagca atctcccggg cagggccaca
     1381 atcgcccgcc ggttgaagac aaggaaggca aatgggaacg gtggtcgaaa aagcgtacct
     1441 tcgtgcgcga actcgccggc acctacagcg atgtttacaa atcgctgctc gaacaacccc
     1501 gagtctattc gtcacgcaac catccgtgga agggcgggcc ggcgctctat ggcaagcacg
     1561 tggtgagtcc gcaggccgcc aatgtggtgc agtcgatcga gacccatatc gagtgctacg
     1621 cccccggtgc ttacggtcag aaacacggcc atctcaacag cgcggtgttc tatgtgctca
     1681 agggccgcgg acatgacatc cacgacggcc gccgcatcga gtggaaggcg ggcgacatca
     1741 tgatcgtcga gtgcgctagc gtgcatcagc atttcaacga cgaccccgac aacgaagcga
     1801 tcctcttggt gttcaaggcc aagccgctgt tcttgttcat gcatctgttg tttcagaaaa
     1861 tcgtgtccta cccgcccaac gaagcggcac ccggtcacga gaatttccgt ccgccgaagg
     1921 atttgtaagc ctgacatcct ccccgccatg aatagcgggg gttccagtgt tctgcatcaa
     1981 gcagctctcc ggatggttcc tgcttcgtcg ggccgcttaa ctgcggtgtt cctccacagg
     2041 cttcaacgcg ccgtccgcgc gccgtagtat gttgatcgcc gcatttg
//
LOCUS       DATILV010000835         1661 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3017406, whole genome shotgun sequence.
ACCESSION   DATILV010000835 DATILV010000000
VERSION     DATILV010000835.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1661)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1661)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1661
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3017406"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..210
                     /locus_tag="VLJ17_20255"
     CDS             <1..210
                     /locus_tag="VLJ17_20255"
                     /inference="COORDINATES: protein motif:HMM:NF014800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HSV25346.1"
                     /translation="YEELLDDAVQGNSGRFARQDYVEEAWRIVDPILADEAPVYEYEP
                     GTWGPQQASTLIAPNGGWFDPPPPG"
     gene            502..>1661
                     /locus_tag="VLJ17_20260"
     CDS             502..>1661
                     /locus_tag="VLJ17_20260"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV25347.1"
                     /translation="MKLVERLIIFAQEVRMARNYRYISADSHYESPPEHWTHRVAKQY
                     RDRAPRRIKLANGKDALAMEGKPLIYGGTSLFGGRAPEVFDPTLLDYDNTPGCGSAEQ
                     RLHEQNQDGIDAEVLFALDVRNSAIRDKAARIGVVQGFNDFFAEEYCAVDRDRLIGMA
                     VLPNSGVAEDIAELERCKRMGFKGAWLSTFPSGKGFPTAEDDRFWAAALDLEMPLVIH
                     TGFPTKVGSRETPLFNYPKDPQGEQRPPTDFVQRFARQAPHHSGSVEVSQIIIAGVFD
                     RFPKLQIYWAENNVGWLPYFGEQIDKEYETNHFWAERQMGLARLKRKPSEYLKENAHW
                     GFFEDRIGMKLRHEIGVDRIMWSTDFPHVVTRWPNSLKFLDAQMTGVPAEEKR"
BASE COUNT          367 a          433 c          509 g          352 t
ORIGIN      
        1 tacgaggaac tgttggacga cgcggtgcaa gggaattccg gtcgcttcgc gcgtcaagac
       61 tatgtcgaag aggcttggcg catcgtggat cccattttgg ctgatgaggc tcctgtttac
      121 gagtatgagc cgggcacatg ggggccgcag caggcgagca ctctgattgc gcccaacggc
      181 gggtggttcg atccaccgcc gccgggatga ctgatcaatg cgcagggctt gatctattac
      241 tttaaacctc gcctcttgag gcgaggcaca attaaatggg gtttccaaag ggggcgagca
      301 tcccctttgc cagattgcaa ttggcggcgg ggttcaaacc ccgctcacga tttaagttga
      361 tatttgctcg aatttgcgtt ggttcggatc aggttttacc gtcaatcagg aattcagcga
      421 cggcagcgtt ctcgacgcta acgctggcgt agcgaaatgt ggtaagcaag gcgctggata
      481 gggatattca aatattcccg gttgaaactt gttgaacgat taatcatctt tgcgcaggaa
      541 gtccggatgg ccagaaatta tcgctatatc tccgctgaca gtcactatga gtcaccgcct
      601 gaacattgga cccatcgggt ggcgaagcag tatcgcgacc gcgcgccgcg gcgcatcaag
      661 cttgccaacg gcaaagatgc tttggcgatg gaaggtaagc cactgattta cggcggcacg
      721 agtctattcg gcgggcgtgc gccggaggta ttcgacccga cgctactcga ctatgacaac
      781 acgccgggct gcggctcggc ggagcaacga ttgcacgaac agaatcagga cggcatcgat
      841 gcggaagtgt tgttcgcgct cgacgtgcgc aattcggcga tccgtgacaa ggcggcgcgc
      901 atcggcgtgg tgcagggctt caatgatttc ttcgccgaag aatactgcgc cgtcgatcgc
      961 gatcgtttga tcggaatggc tgttttgccc aacagcggcg tggctgaaga tatcgccgag
     1021 ctggaaagat gcaaacggat gggcttcaag ggcgcgtggc tcagcacttt tccaagcggc
     1081 aaaggatttc cgacggctga ggacgatcgc ttctgggcgg cggcgttgga tttagaaatg
     1141 ccgttggtga ttcataccgg tttcccgact aaagtcggat cacgggagac gccactcttc
     1201 aactatccca aggatccgca gggcgagcag cggccaccga ccgatttcgt ccagcgcttc
     1261 gcacgccaag cgccgcatca ttcgggctcg gtggaagtga gccagatcat catcgctggt
     1321 gtgttcgacc gctttcccaa gctgcaaatt tattgggcgg aaaataacgt cggctggctg
     1381 ccgtacttcg gtgagcagat cgataaagaa tatgagacca accacttttg ggccgagcgg
     1441 caaatgggtc tggcgcgctt gaagcgcaaa ccgagcgaat acttaaaaga gaacgcccac
     1501 tggggattct tcgaagaccg catcggtatg aagttgcgcc acgagatcgg cgtcgaccgg
     1561 atcatgtggt cgaccgactt cccacatgtc gtcacacgct ggccgaattc cctgaaattc
     1621 ttggacgcgc agatgaccgg cgtgccggcc gaggagaagc g
//
LOCUS       DATILV010000836         1701 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1999722, whole genome shotgun sequence.
ACCESSION   DATILV010000836 DATILV010000000
VERSION     DATILV010000836.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1701)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1701)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1701
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1999722"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            224..357
                     /locus_tag="VLJ17_20265"
                     /pseudo
     CDS             224..357
                     /locus_tag="VLJ17_20265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197967.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
     gene            complement(518..1411)
                     /locus_tag="VLJ17_20270"
     CDS             complement(518..1411)
                     /locus_tag="VLJ17_20270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25348.1"
                     /translation="MRSKDESLVRRYIGLSAGGFAVCLTAVTLAAGKARAEWANAIPK
                     FASADFGWQSNLEDWEDPPPGARHGPIKNDPAYPFRNNTEGNRAGSGATKRITNTKDP
                     VLKPWAAAQIQATNDEILQGVRDIPFTAQARCYPGGVPGQLLWPFEPVYFIQTPKEVW
                     MIWQRDHMVRRIYLTDKHSDHVTPSWFGESIGHYENGDTLVVDTMGLSTNISYIDNFR
                     TPHSERLHVVERFTIEPGGKGMSALVTVEDPDTFDAPLTMTRRWFKFDGRMLETVCAE
                     NNGDFFNQNLFPQPEAKTPDF"
BASE COUNT          310 a          519 c          518 g          354 t
ORIGIN      
        1 gcccgccttt tcgacacgat tgagcccagc acgtggctca tcgagcagga tgagcttggg
       61 gccgccggcg aggattatgg atcatggtct ttatgccgga cggcatcctc gtcgcgaacc
      121 ggaggtggcg gccgccggca ccggacaaag gcaagatcgc gccctcccgc tcgcgtgcga
      181 ggtcaccagc gacccgggcg cggtgatctt atcgcgcgga gatctgtcga agcacttcgg
      241 cggtctcaaa gcgctcgacg gcttgagctt cagcgtgcgc tcaaacgatg tgcatgcgct
      301 gatcggtccg aacggctccg gcaagacatg ctcaacgtgc tgagcggcat ctatcaacgc
      361 gcgcggggcc gccggtgcgc gcgccctcaa tgctgcgcaa ggagattgta gccaattttc
      421 cgccatagac accgtagaat tttagtgcgt agcgcgcctc cctccgttcg gtagatgaac
      481 ggtagctgtg agagagtcgc actgataaag aaagaggtca gaagtcgggc gtttttgcct
      541 ccggctgagg aaacaggttc tggttgaaga aatcgccgtt attctcggcg cagacggtct
      601 ccagcatccg gccatcgaac ttgaaccatc gcctggtcat ggtgagcggc gcgtcgaacg
      661 tgtcggggtc ttccacggtc accagcgcgg acatgccttt gccgcccggc tcgatggtga
      721 agcgctccac cacatgcagc ctctcgctgt gcggcgtgcg aaagttgtcg atgtagctga
      781 tgttggtgga gagccccatc gtatcgacta ccagcgtgtc gccgttttcg taatggccga
      841 tcgattcgcc gaaccaagat ggcgtcacgt gatccgaatg cttgtcagta aggtagatgc
      901 gacgcaccat gtggtcacgc tgccagatca tccacacttc cttaggggtc tggatgaaat
      961 agacgggctc gaagggccac aagagctggc cgggaacgcc tcccggatag catcgcgctt
     1021 gcgccgtaaa tggaatgtca cgcacaccct gcagtatctc gtcattggtc gcctgaatct
     1081 gcgctgccgc ccacggcttg agcaccgggt ctttcgtatt ggtgatacgc ttggtcgcgc
     1141 cggaaccggc ccgattcccc tcggtgttat tccggaaagg ataagccggg tcattcttga
     1201 tcggaccatg gcgggctccg ggcggcgggt cctcccaatc ttcaaggttc gactgccagc
     1261 cgaaatcggc tgaggcaaat ttcgggatgg cgttcgccca ctctgcccgt gccttgcccg
     1321 cggcaagcgt caccgccgtc aggcagacgg cgaaaccgcc ggccgatagt ccaatgtaac
     1381 ggcgcacaag tgattcatct ttcgacctca atccgggcat cattttcctc cctgaatggc
     1441 ctcgccccat cgcggctgcg ctttgcccaa agagcaccgc caagtttctt gccgaacggc
     1501 tccgcgccga gtgctgtggt tttcgggagc acgacagtgg cggctatcat cgcacgccac
     1561 atgcccgaat tgaatacatc gtcgcggcta tcgtgtggtg gcggtcatgt tgtagccgat
     1621 ctcggcaccg ccctgttgtt gcgcctgtac catcggctct cttcgccggt cggtacagcc
     1681 ggtgcgcgtc gatgtggccc c
//
LOCUS       DATILV010000837         2984 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3278651, whole genome shotgun sequence.
ACCESSION   DATILV010000837 DATILV010000000
VERSION     DATILV010000837.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2984)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2984)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2984
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3278651"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..348
                     /locus_tag="VLJ17_20275"
     CDS             <1..348
                     /locus_tag="VLJ17_20275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25349.1"
                     /translation="IEQCEAAQTIKARFGLTAAFDYLVGEKLMSFASAASRHPDFARE
                     LPRFVSEVRRMFTPDEIGAQLAQIERSQNESNVAVLEEDDLLREGPAAVAECVQQFML
                     VKELLTAPMLGTS"
     gene            436..>2984
                     /locus_tag="VLJ17_20280"
     CDS             436..>2984
                     /locus_tag="VLJ17_20280"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HSV25350.1"
                     /translation="MMTLEPVLTPHGLLTLRQTAQAPALEPDQGLRLEKAFLRGSGHG
                     LLWLGADEVGTVLPPVLSYWRELGMRYMTALCALPGVGDGRSKPPVPIPADGELDTMA
                     AAVPPMTGAEYLTTSVLANLWRGMDAAFDAELVQAKLSVQEFLKGRHPAWNLVGRVHF
                     NLAENRKDEEAPFAFLATYTTRLSAEAKAQHLPLGKALQEYSGARNRQRLLSLLMPVQ
                     RAAESSPWLKTMVNAGDIFHPLRWSPQQALQFLKDVPALESAGVVVRMPASWRMNHPA
                     RPQVKATVGGNAPSQLGMDALLDFRMEVTLEGESLSKAEIKRLLAHSDGLALIRGKWV
                     EVDHERLNRTLEQFEAIERRAAADGLSFGEAMRMLAGAGIAGDKTAAPADIDWSQTIA
                     GPWLAETLATLRHPDWLMRVDPGQYFQGTLRPYQQSGVQWLYLLTQLKLGACLADDMG
                     LGKTIQVLSLLLVIKNEDRGNRKPCLLVAPASLLANWAAEIARFAPSLKTVVVHPSAA
                     PSEKLNTYGADKFADTDLVITSYGFLTRTPWLETTSWRFVVLDEAQAIKNPAAKQTKS
                     VKRLKAEMRIALTGTPIENRLGDLWSIFDFINPGLLGSSKEFSAFVKRLADRPHNPYG
                     PLRDLVRPYILRRLKTDKSIIADLPDKTEVKTFCPLSRKQAALYQQAVAELAGHLEEV
                     DGIKRRGIVLAFLMRLKQICNHPSQWLGDGAWNEEDSGKLGRLRDIAEVVAARQEKAL
                     VFTQFKETTAPLVAFLGSVFGRPGLVLHGETEVKKRKDLVRQFQEDEDVPFFVLSVKA
                     GGTGLNLTAASHVIHFDRWWNPAVENQATDRAFRIGQTKNVLVHKFVCRGTV"
BASE COUNT          601 a          856 c          918 g          609 t
ORIGIN      
        1 atcgaacagt gcgaagcggc tcaaacgatc aaggctcgat tcgggctcac ggcggccttc
       61 gactaccttg tcggtgagaa gttgatgagc tttgccagtg ctgcctccag acatcccgac
      121 ttcgctcggg aactgccgcg gtttgtttcc gaggtgagac gcatgttcac gccggatgag
      181 attggcgcac agttggcgca aatcgagcgt tcgcaaaacg aaagcaacgt tgctgttttg
      241 gaggaggatg atcttctccg tgagggtccg gccgcagtcg cggagtgcgt tcagcagttc
      301 atgctggtca aggaattgct gaccgcgccc atgctcggta cttcgtgaca gaatggcgaa
      361 ttacttctcg atgtggcgcg cggctcaccc ccaaaatcgc ggacatttcc ggtgggatcg
      421 taaggtctca ccgtcatgat gacgctggaa cccgttctta ccccgcatgg tttgctgacg
      481 ctgcgacaaa cggcgcaagc tcctgcgttg gagcccgatc agggcttgcg gctggagaaa
      541 gcatttttac ggggctcagg acacggattg ttgtggctcg gcgccgacga agtcgggacg
      601 gttctcccac cggtgttgtc gtattggcga gagcttggaa tgcgctacat gaccgcactg
      661 tgcgctcttc ctggtgttgg agacggccgt agcaagccac ctgtgccgat ccccgccgat
      721 ggcgagttgg acacgatggc agcggccgtt ccgcctatga ccggcgcgga atacctgacg
      781 acgtctgtcc tggccaatct ttggcgaggt atggatgcgg cctttgatgc cgagttggtg
      841 caagccaagc tctccgtgca ggagttcctc aagggccgtc atccggcatg gaatttggtt
      901 gggcgcgttc atttcaacct tgcggagaat cggaaggacg aagaagcccc gttcgcgttt
      961 cttgcgacct acacgacccg actttcggct gaggccaagg cccagcatct gccgctcggc
     1021 aaagccttgc aggagtattc cggtgcgagg aaccgccaac gcctgctctc gctgctgatg
     1081 cccgtccagc gcgccgccga aagtagcccg tggttgaaga cgatggtgaa tgccggcgat
     1141 atctttcacc cgttgcgctg gagcccacaa caggctctgc aatttctgaa ggatgttccc
     1201 gcgctcgaaa gcgccggggt ggtcgtgcga atgccagcga gttggcgcat gaaccacccc
     1261 gcacgcccgc aggtgaaagc aacggtcggg ggcaatgctc catcgcagct ggggatggac
     1321 gcgctgctcg acttccgaat ggaggtgacg ctcgagggcg aaagcctctc gaaggccgag
     1381 atcaagcgac tcctggcgca ttccgatgga ttggccttaa tccgtggcaa gtgggtcgag
     1441 gtcgatcatg aacgactgaa tcgcacactc gagcaatttg aggccatcga gcgccgcgcc
     1501 gccgccgatg gtctttcgtt cggtgaggcg atgcgaatgc tggctggggc tggcattgcc
     1561 ggagataaaa ctgccgcacc agccgacatc gattggagcc agaccattgc cggcccctgg
     1621 ctggcggaga cgctggcgac cttgcgccat cccgattggc tcatgcgggt cgaccccggt
     1681 caatattttc agggtacgct gcgaccctat cagcagtcgg gtgtgcaatg gctctatctg
     1741 ctaacgcagc tcaagcttgg ggcttgcctt gccgacgata tggggctcgg caaaaccatc
     1801 caggtgttgt cgctgctgct ggtgatcaag aatgaggaca gggggaatcg gaaaccttgc
     1861 ttgctcgtcg cccccgcctc gttgttagcc aattgggctg cggagattgc ccgatttgcg
     1921 ccaagcctga aaacagtcgt ggtccatcca tcggctgcgc cgtccgagaa actgaacacg
     1981 tacggtgcgg acaaattcgc agataccgat ctcgtaatca cgagctacgg ctttctgacg
     2041 cgtacgcctt ggctggaaac tacatcatgg cggtttgtgg tgctcgatga agcacaggcc
     2101 atcaagaacc cggctgccaa gcagacaaaa tcggtcaaga ggctcaaggc agaaatgcgc
     2161 attgcgctga ccggcacgcc catcgagaat cggctcggtg acctatggtc gatcttcgac
     2221 ttcatcaatc ctggcctgtt gggatcgtcg aaggagtttt cggcattcgt caaacgcctc
     2281 gccgaccggc cacataaccc ttacggtccg ctccgcgacc tggtgcgccc ctatatcctg
     2341 cgacggctga agaccgataa gagcatcatt gccgacctgc ccgacaagac cgaggtgaaa
     2401 accttctgcc ccttgagccg caagcaggcc gcgctttatc agcaagcagt ggcagagctg
     2461 gccggccatc tcgaagaggt cgatggaata aaacgaagag gcatcgtcct ggcttttctc
     2521 atgcgtttga agcagatctg caaccatcca tcgcagtggc tcggcgacgg cgcgtggaat
     2581 gaggaggata gcggtaagct tgggcgtctg cgcgacatcg cggaagtggt tgccgcccgg
     2641 caggagaagg cacttgtctt cacccagttc aaggagacga cggcgccact agtggcgttc
     2701 ctgggctccg tattcggaag gcccggcctc gtcctgcatg gcgagacaga ggttaagaag
     2761 cgcaaggacc tggtgcgcca atttcaggaa gacgaagacg tcccgttctt cgtgctctcg
     2821 gtcaaagcag gcggcaccgg gctcaatctc acagcggcct cgcatgtcat tcatttcgac
     2881 aggtggtgga atccggctgt cgaaaaccaa gccaccgacc gtgccttccg gatcggacag
     2941 accaagaatg tgcttgtgca caagttcgtt tgtcgcggca ccgt
//
LOCUS       DATILV010000838         1779 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3019056, whole genome shotgun sequence.
ACCESSION   DATILV010000838 DATILV010000000
VERSION     DATILV010000838.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1779)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1779)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1779
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3019056"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            55..1494
                     /locus_tag="VLJ17_20285"
     CDS             55..1494
                     /locus_tag="VLJ17_20285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_023098450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1182 family transposase"
                     /protein_id="HSV25351.1"
                     /translation="MRRFVKGVDRGQSTLFPECLEVWIVEDNPIRVIDVFVEELDLAG
                     LGFGGVDPEATGRPSYHPSVLLKLYIYGYLNRVQSSRRLEHEAGRNVEVMWLTGRLAP
                     DHKTIADFRKDNGTAIRKVCARFVALCRTMGLLTQASVAIDGSKFKAVNNRDKNFTRA
                     KMERRMAQIEESVARYLQQLDSADRQEPSEALKTKTSRLKEKIEKLKEQMRRLEDLKV
                     QMLATPDQQISLTDPDSRSMATSGRGSGVVGYNVQVAVDTKHHLIITHEVTNIGTDRS
                     QLAHVANEAKAALDVEKLDAVADRGYFNSEEILTCEEAGITVTLPKPMTSNSKAEGRF
                     GKQDFRYMAEEDFYVCPAGEKLAYHYTTEEKGLVLRRYWTNACQSCAIKHRCTTAKER
                     RITRWEHEHILEAVQRRLDEHPERMRQRRETVEHPFGTIKARMGATHFLMKTLPRVAS
                     EMALHVLAYNLTRVMNIMGTQPLMAAIRA"
BASE COUNT          397 a          512 c          545 g          325 t
ORIGIN      
        1 cactcctaaa ggagtgtgta ccgtatgatt ccggcgcgac ttgcggggga ttggatgagg
       61 cgcttcgtta aaggggtaga tcgtgggcag agcacgctgt ttccggagtg cctggaagtt
      121 tggattgtcg aagacaatcc cattcgggtg atcgacgtct ttgtcgagga actcgatctg
      181 gctgggcttg ggtttggtgg ggtcgatcct gaggcaaccg gccggccctc gtatcatccg
      241 tcggtcctgc tgaagctcta catctacggc tatcttaacc gggttcagtc gagccggcgg
      301 ctcgagcacg aggctgggcg caacgttgag gtgatgtggc tgacgggccg acttgctccc
      361 gatcacaaga cgattgccga cttccgcaag gacaatggca cggccatccg caaagtgtgc
      421 gcgcgcttcg tcgcgctgtg ccgcacgatg ggtctgctca cgcaagccag cgtcgcgatt
      481 gacggcagca agttcaaggc ggtgaacaac cgcgacaaga acttcacgcg cgccaagatg
      541 gagcggcgca tggcgcagat cgaggagagt gtcgcgcggt atctgcagca gctcgacagc
      601 gccgaccggc aagagccgtc cgaggcgctc aaaaccaaga cgagccgcct caaagagaag
      661 atcgagaagc tgaaggagca gatgcggcgt cttgaggatc tcaaggtgca aatgctcgcc
      721 acgccggacc agcagatctc gctgaccgat cccgattccc gctcgatggc gaccagtggc
      781 cgcggttccg gcgtcgttgg ctacaatgtc caggtcgccg tcgacaccaa gcaccatctg
      841 atcatcacgc atgaggtgac caacatcggg accgatcggt cgcagcttgc acatgtggcc
      901 aacgaagcca aggcggcgct ggacgtggag aagctcgatg ccgtcgccga ccgtggttac
      961 ttcaacagcg aagaaatcct gacatgcgaa gaagctggca tcacggttac actgccaaag
     1021 ccgatgacct cgaactcaaa ggcggaagga cgcttcggca agcaggactt ccgctatatg
     1081 gctgaggagg acttttacgt ttgtcctgca ggtgagaagc tcgcctacca ctatacgact
     1141 gaggaaaaag gattggtcct gcgccgctac tggaccaacg cctgccaaag ctgcgctatc
     1201 aagcatcgtt gcaccaccgc taaggaacga cggatcaccc gatgggaaca tgagcacatt
     1261 cttgaagccg tccagcgccg gctcgatgag catccggaga ggatgcggca gcggcgcgag
     1321 acggtcgagc atccctttgg cacgatcaag gccaggatgg gagcaaccca cttcctgatg
     1381 aagacgctgc cccgggttgc ctcggagatg gcgctgcacg tgctggccta caatctcacc
     1441 cgtgtcatga acatcatggg cactcagcca ctcatggccg cgatcagggc atagtcaaac
     1501 ccaaaaaatg ctcccacacg acaatcggcc aagatcgcga cgcctcgaca cttccggtga
     1561 agcgttttta cacaaccaag accctgaacc gacacgagct acccaatttt gtgtgatgca
     1621 cagcaccgct tttttcaacg atgtggtagg gtgtagtcct cggcgtcagg aaagcccatg
     1681 agacggcgcg agttcatcac ccttctcggt ggcgtggcag cgtgggtgtc tccggcacgc
     1741 gcgcaggagc cgcgaagggt aatcggttat ctgggcagc
//
LOCUS       DATILV010000839         3896 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1487963, whole genome shotgun sequence.
ACCESSION   DATILV010000839 DATILV010000000
VERSION     DATILV010000839.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3896
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1487963"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(77..1066)
                     /locus_tag="VLJ17_20290"
     CDS             complement(77..1066)
                     /locus_tag="VLJ17_20290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV25352.1"
                     /translation="MMKMKFPRRQILHLVAGAAALPAILRVARAQAYPSRPVRFVVGF
                     APGGGGDLATRLMGQWLSERLGQQFVVENRVGASSNLATEQVVRAPADGYTLIQLNVA
                     NAINASLYEKLSFNVLRDLVPVASFMRVPNIMEVAPTLPVNTVPEFIAYAKANPGKVM
                     FVSSGVGTSIHMSGELFKAMAQIDMLHVPYRGLGAGGYADLMTGTVHVTFDNLPSSIE
                     LARAGKLRALAVTSTARSEAMPELPTVSEFLPGYEASAWYGIAAPVGTPVAIVERLNH
                     ELNAAFADPRMKARIAELGGTPLPGSPADFGKLIAEETEKWAKVVKFAGIKPE"
     gene            1446..1619
                     /locus_tag="VLJ17_20295"
     CDS             1446..1619
                     /locus_tag="VLJ17_20295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25353.1"
                     /translation="MPRLARVNCSASLTAPFVRFALKAAIEGRLTRPDAVLDTHILVS
                     ALISPVGHPAFFA"
     gene            1624..2493
                     /locus_tag="VLJ17_20300"
     CDS             1624..2493
                     /locus_tag="VLJ17_20300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV25354.1"
                     /translation="MMPSPTSHIFTSQRLRLHYYDWGNQHAPPLVLVHGGRDHARNWD
                     WVAERLRDRWHIITPDLRGHGDSQWSQDGNYSMPGYIYDLAQLIHQRQLAPVTLIGHS
                     LGGNIATRYAGIYSDKVRRLVSIEGLGPSPTAMAERLAKPMVERLRAWIEAQRGLAGR
                     VPRRYGSIEDAVIRMQEANKHLSVEQARHLTRYGVNQNEDGTYSWKFDPYLHVFPPVD
                     LPVAEIERLWAAVACPTLLVYGKESWASNPQEDGRARHFKNAKVIMVEKAGHWVHHDQ
                     TDYFVETVRDFLA"
     gene            complement(2615..3622)
                     /locus_tag="VLJ17_20305"
     CDS             complement(2615..3622)
                     /locus_tag="VLJ17_20305"
                     /inference="COORDINATES: protein motif:HMM:NF025598.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4340 domain-containing protein"
                     /protein_id="HSV25355.1"
                     /translation="MNAKHLTALAVLAAVSVATTAWVLRASSPTVAADRRGETVVPSL
                     MAKRNDIISLSIRDGSDTLAIERRDNRFVAADSGYPIKTDAVGDVIVSCALLSFQEAR
                     TSNPARYGDLGLADPGAKDAGKEITFRTASGELADLLVGNSDPTVGGPAGGVFIRLKG
                     QPQTFLARGNVRLPSGRSDWFVPFDPDIKSSAIKKVELAGGGRDGVIASANAEKPGTF
                     VLADLPEKRTADSNKVTQLTTFIDSFTFNDVRKATKSADDARRMVVETSDDLHLIITA
                     VGDLTQGWVQIAAQAKSDAAKNKAQMIDSKVAGYEFRLPEYKAGMLGWTISDLTSEKQ
                     S"
BASE COUNT          763 a         1166 c         1190 g          777 t
ORIGIN      
        1 tcgtgatgaa gccgaccaac gttgtgagta gtgttgacga tcgtttttgc atcgactcct
       61 ccatgcgggc accggatcat tccggtttaa tgcccgcgaa cttcaccacc ttggcccatt
      121 tctcggtttc ctcggcgatg agcttgccga agtcggcggg cgagccgggc agcggtgtgc
      181 cgccgagctc ggcaatgcgt gccttcatcc tggggtcggc aaacgccgca ttgagttcgt
      241 ggttgagcct ctcgacaatg gcgacgggcg tcccgaccgg cgcagcgatg ccataccacg
      301 cgctcgcctc atagcccggc aggaattccg acacggtagg aagctccggc atggcctctg
      361 agcgcgccgt cgaggtcacc gccaacgcgc gaagcttgcc ggcgcgcgca agttcgatcg
      421 aggacggcag attgtcgaag gtcacgtgca ccgtgccggt catgaggtcc gcgtagccgc
      481 ccgcaccgag gccgcgatag ggcacatgca gcatgtcgat ctgagccatc gccttgaaca
      541 attcgcccga catatggatc gatgtcccaa cccccgaaga tacgaacata acctttccgg
      601 ggttggcctt tgcgtaggcg atgaactctg gaactgtgtt gaccggaagc gttggagcga
      661 cctccatgat gttgggcacg cgcatgaacg acgccaccgg gacgagatcg cgcagaacat
      721 tgaagctgag cttctcatag agcgacgcgt tgatcgcgtt cgccacgttg agctggatga
      781 gcgtgtagcc gtcagcgggg gcgcgcacca cctgctcggt ggcgagattg ctggaggcgc
      841 cgaccctgtt ctcgacaacg aattgttgcc cgagccgttc ggatagccat tgccccatca
      901 ggcgcgtggc aagatcgccg cctccgccag gcgcgaagcc tacgacaaac cgcaccggcc
      961 gcgacggata ggcttgcgct ctcgccacgc gcaatatcgc cggcagcgcc gcagcgcctg
     1021 ccaccaaatg cagaatttga cggcgcggaa atttcatctt catcataatt cgtctccagg
     1081 gtggtggcgc aacgcgcata cgcatgccga aacgtggttc ataaatcatg tatccatgaa
     1141 ggcgtgatac ccaccgcagt ctgcatgttt gttatcaagt tacctcgggc gcacatccgc
     1201 gcggaagggg aatgccacga ttgagaccta cggtgacgtc aacgattgtc gttggaggag
     1261 ggatgccgat tgttgatatc gataatgttc agcatgttcg ccacaaccat cccgcgcgat
     1321 atgttgactg ccgagcattt accggattac gagtataggt gtttatccac atatatgtgg
     1381 tgccaaaatg gaagtgtccg ctggcgcgtg tttcaccgca ccgtttgagg acatcaagac
     1441 gcacaatgcc aagactcgcc cgggtgaatt gcagcgcatc gttgacggcg ccgttcgtga
     1501 ggttcgcgct aaaagccgcc attgagggaa ggctgacaag gcctgatgcg gtgctcgata
     1561 cccacatctt ggtgtcggcg ttgatctcgc cagtgggcca tccggccttc ttcgcatgaa
     1621 ttcatgatgc caagcccgac ctcgcacatc ttcacttccc agcgtctgcg cctgcactat
     1681 tacgattggg gcaatcagca tgcgccgccg ctggtgctgg tccatggtgg tcgcgaccat
     1741 gcacgcaact gggactgggt ggcggagcgg ttgcgcgacc ggtggcacat catcacgccc
     1801 gatctgcgcg gacatggcga cagccaatgg tcgcaggacg gcaactacag catgccgggg
     1861 tacatctatg atctcgcgca actcattcat cagcgccagc ttgcacccgt gactctcatc
     1921 ggtcattcgc tcggcggcaa tattgcgaca cgttacgccg ggatctactc cgacaaggtg
     1981 agaaggctcg tctcgatcga agggctcggg ccgtcgccca cagcgatggc cgagcgtctc
     2041 gcaaagccca tggtcgagcg cctgcgtgcc tggatcgagg cgcagcgcgg cctcgccggc
     2101 cgcgtgccgc gacgttatgg gtccattgag gacgccgtca ttcggatgca ggaagccaat
     2161 aagcacctct cggtcgaaca ggcgcgccac cttacccgct acggcgtcaa ccaaaacgag
     2221 gacggcacct acagctggaa attcgacccc taccttcatg ttttcccgcc cgtcgattta
     2281 ccagtggcgg aaatcgagcg gctatgggcg gcagtcgcct gtccgacctt gctcgtctat
     2341 ggcaaagaaa gctgggcctc caatccgcag gaggacggcc gggcccgcca tttcaagaac
     2401 gcaaaagtca tcatggtgga gaaggccgga cactgggtcc accatgacca gacggattat
     2461 ttcgtcgaga cagtgcggga ttttttggcg tagaccggat ggaacgcagg ctctctcgac
     2521 acgcccagca cgttcgctgc cgcgctgatg ccaacgatcc tcgccatatt gcggggaatt
     2581 gcacagaatt agcgcagatt acaaaattac tgttttagct ctgcttttca ctggtcagat
     2641 cggagatcgt ccagccgagc attccggctt tgtactcggg caggcggaat tcgtaacccg
     2701 cgaccttgga atcgatcatt tgcgccttgt tcttggcggc gtcgctcttg gcctgcgcgg
     2761 cgatctgcac ccagccctgg gtaaggtcgc cgacggcagt aataataagg tgcaaatcgt
     2821 cactggtctc caccaccatg cggcgagcat cgtcagcgga tttggtggcc ttgcgcacgt
     2881 cattgaacgt gaagctgtcg atgaaggtcg tgagctgggt caccttattg ctgtcagcgg
     2941 tgcgtttttc cggcaaatcg gcaagcacga aggtaccggg tttttcggcg tttgcggatg
     3001 cgatcacgcc gtcgcgtccg ccaccagcga gctcgacctt cttgatcgcg ctggatttga
     3061 tgtcgggatc gaaggggacg aaccaatccg aacggccgga tggcagccga acgttaccgc
     3121 gggccaaaaa tgtctgcggc tgacctttga gacggatgaa aacgccgccg gccggcccgc
     3181 ccacagtggg atcgctattg ccgaccagga ggtcagcgag ttcgccgctg gccgtgcgga
     3241 acgtgatttc cttgccggca tccttggcac cgggatccgc aagaccgaga tcgccatagc
     3301 gggcggggtt actggtgcgt gcttcctgga aggacaggag ggcgcaacta acaatgacat
     3361 cgcctacggc gtcggtttta atgggatagc cggagtccgc ggcgacgaag cggttatcgc
     3421 ggcgctcgat cgccagggtg tcggagccgt cgcgtatgga aagactgatg atgtcgttcc
     3481 tctttgccat aagcgagggg acgacggtct caccgcgccg gtccgctgcc acggtcgggg
     3541 agctggcgcg caagacccaa gcggttgtcg cgacactgac cgccgcgagc acggcaagcg
     3601 ctgtaagatg cttcgcattc atgatgctgc tccgtctcgg ctagcgtttt tcaaaaattc
     3661 atgtccaaca actgtcgggc gggcaaggac gcgctcctga ggaattctcg aaggatcgcg
     3721 ccgcgcccac cttcggcgcc gcggtggcac ggcgcgcgag gccgttcgcc tcaccgtata
     3781 ccgtgccatg cgccgttacc ctatgtcgtc atgtccgaag gctttttcgg cagtggccgt
     3841 cgcgaccggc gtagtccgaa ggcgagggcg atgcacccga tcgtcaccgg cacgac
//
LOCUS       DATILV010000840         5219 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4047180, whole genome shotgun sequence.
ACCESSION   DATILV010000840 DATILV010000000
VERSION     DATILV010000840.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5219)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5219)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5219
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4047180"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..329
                     /locus_tag="VLJ17_20310"
     CDS             <1..329
                     /locus_tag="VLJ17_20310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009859258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSV25356.1"
                     /translation="LMLSIGGGWAQQSPTRGAQTEPRPAEASPNDIDGPTMFATVCGY
                     CHQDGGRAAGRGPKLAGSKRSDEYIIDRIRNGKSGAMPAFGGSLSEGQIIAILAYIRA
                     LDDDGN"
     gene            444..1244
                     /locus_tag="VLJ17_20315"
     CDS             444..1244
                     /locus_tag="VLJ17_20315"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HSV25357.1"
                     /translation="MPLRRKLATTTAARTFGAAVALVLLSVAAALPRPLQVIAERGTL
                     TLCANPDALPWASKIGTVPGFQVELAEDLAKRLGVSLTRQWVTSVFQYRRVDCDVMFD
                     AISQKGASVEGGLRLSRPYQRSGVVLAARGDSSVASLADLTAGQRVGVTIGSLVSMKL
                     DNRGVKTTPFVFESEMMAALAGGDIDAAAVTPITIGWYNKVHPQAQIRMIAAFADDPE
                     LNWNLAVGMIGPDDKLRQQIDASLGEMLGDGTIARIFARYGIEARSPQ"
     gene            complement(1334..2314)
                     /locus_tag="VLJ17_20320"
     CDS             complement(1334..2314)
                     /locus_tag="VLJ17_20320"
                     /inference="COORDINATES: protein motif:HMM:NF025606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4344 domain-containing metallopeptidase"
                     /protein_id="HSV25358.1"
                     /translation="MKSELGEGAVVFRRSNRKGCVGKSSGYCVGLFLMAGILFASVAT
                     SVRSAPSVSEQFQDRIKEIARSLGNNPRLKKLSQQERESLVEFITGNMLFVMLHEMAH
                     TTVDELMIPVLGREEDAADDFAVLRLLRVGTDFSHRVLVEAAKGWFLSDRRDRNEGEK
                     LVFFDEHGLDQQRAYQIVCLMVGSDPDKFKDLANETKLPEDRQESCQKDYAKISKSWE
                     TVLKPHRRTPEQSKTKIEVAYGEGKGKLDAYAKGFNYLRLLEAVAERAEDELAWPAPF
                     TLDMQSCGIINARWVVTTRKLTLCYELAADFAELYRDYNPRPTAKKRKSN"
     gene            complement(3131..4069)
                     /locus_tag="VLJ17_20325"
     CDS             complement(3131..4069)
                     /locus_tag="VLJ17_20325"
                     /inference="COORDINATES: protein motif:HMM:NF025606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4344 domain-containing metallopeptidase"
                     /protein_id="HSV25359.1"
                     /translation="MGSLRHLPIRTTLCMLLISCGAASGQSPPSGSPSFQERIEEVAS
                     ALRNYPRLKSLSQQQLVDRVEFVAGNTLFILLHEIGHVQMSEMNLPVLGREEDQADTF
                     AAIAMLKIGTSFSQRVLADASQGWFLNARRDQQTGATPLYYDEHNLSPQRAYQIVCLM
                     VGSDPAKFKSLADEAKMPESRQQSCKRDYTKALQSWDMVLKPHRRMPDQPETKINVAY
                     GEAEGDFEIFARSFRALRILEAVARRSASEYAWPAPFTMEMLSCSGPDASWNDETRTL
                     KVCYQLAFDFAQLYLAYVAAAPPAVPVSGKQRRKSK"
     gene            4372..4779
                     /locus_tag="VLJ17_20330"
     CDS             4372..4779
                     /locus_tag="VLJ17_20330"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSV25360.1"
                     /translation="MNPKWLNEVHILGRDQVSNTAFALSNQPGQALFKRLCAPCHAIG
                     GGDRVGPDLRDVTARRDRAWLTNFISDPKKMFAAKDPTALALAAKFPAVRMPSLGISD
                     IDARDLLSYLDAESARITDSPAGSGPQASRHQH"
BASE COUNT         1076 a         1528 c         1476 g         1139 t
ORIGIN      
        1 cgctcatgct ctcgatcggc ggcggttggg cacaacaaag tccgacccgg ggcgctcaaa
       61 ccgagcctcg gccggccgag gcatcgccca acgatattga tggccccacc atgttcgcga
      121 ccgtgtgcgg ctattgccat caggacggcg gccgcgcagc aggcaggggc ccgaagttgg
      181 ccggctccaa acgcagcgac gaatacatca tcgaccggat ccggaacggc aagtccggcg
      241 ccatgccggc gttcgggggc agtctttcgg aagggcagat cattgccatc ctggcttaca
      301 tccgtgccct cgatgacgat ggcaattgag tggcgcaaga tcgcggagct tgcatatgac
      361 atcggcactc ataggcgcta gatcaagccg tggccaagtt gccgcagctc cctcccccac
      421 aagcgaaagg tgaggcgttc gcgatgccgt tacgacgtaa actagcaact acgacggctg
      481 cgcggacgtt tggcgcggcg gtcgcgctcg tgctgctgtc cgttgcggct gcgctgccac
      541 gccccctaca ggttattgca gagcgcggca cgcttacgct gtgcgccaat cctgacgcgc
      601 tgccgtgggc cagcaagatc ggtacggtgc caggctttca agtcgagctt gccgaagatc
      661 tcgcaaagcg gctcggtgtc tcgctcaccc gacagtgggt gaccagcgtt tttcaatatc
      721 ggcgcgtcga ctgcgacgtg atgttcgacg cgatctccca aaagggcgcg tcggtggaag
      781 ggggattgcg gctgtcgcgg ccctatcagc gcagcggcgt cgttctggca gcccgcggcg
      841 actcaagtgt ggcgtcactg gccgacctca ccgccggaca acgcgtcggt gtgacaatcg
      901 gctcgcttgt ctcgatgaag ctcgacaatc gcggagttaa gaccacgccg ttcgtgttcg
      961 aaagcgagat gatggcggcg ctggccggtg gcgacatcga cgcggctgcg gtcacgccga
     1021 tcacgatcgg ctggtacaac aaggttcatc cgcaagccca aatccgtatg atcgccgcgt
     1081 tcgccgacga cccggagctc aactggaacc ttgcggtcgg aatgatcggc ccggacgaca
     1141 agttgcgtca gcaaatcgac gcatcgctgg gtgagatgct tggcgacggt acgattgccc
     1201 gcatctttgc ccgctacggc atcgaggcgc gctcgccgca gtgagaagca cgcgcggagt
     1261 ttaagagctt cgttagcgtc gtaaccaatg cccgtactgc agcatgttct catccccgag
     1321 cggggctgtc gactcaattc gacttgcgct tctttgccgt tggccgcggg ttgtagtcgc
     1381 gatagagttc agcgaaatcg gcggccagtt cgtagcacag cgtaagcttt ctggtcgtta
     1441 ccacccagcg agcatttatg attccgcagc tctgcatgtc caacgtaaag ggggccggcc
     1501 aagccagttc gtcttcggcg cgctcggcaa cagcttccag cagccgaaga tagttaaacc
     1561 ctttagcgta agcatcgagt ttccctttgc cctcaccgta ggccacttcg atcttcgttt
     1621 ttgattgttc gggcgtgcgg cgatggggct tgagcaccgt ttcccaggat ttcgaaattt
     1681 tggcataatc tttctggcag ctttcctggc ggtcctccgg caactttgtc tcattggcaa
     1741 ggtctttgaa tttgtcgggg tcggacccga ccatcaaaca cacaatttgg taggcacgct
     1801 gctgatcgag accatgctca tcgaagaaaa ccagcttttc accctcattt cgatcgcggc
     1861 ggtcgctcaa aaaccatccc ttcgctgcct cgacaagcac gcggtgcgaa aaatctgttc
     1921 cgactcttag caaccttagg acggcgaaat cgtcggcggc gtcctcttcc ctacctagga
     1981 caggtatcat caattcatct accgtcgtgt gagccatctc atgaagcatc acaaacagca
     2041 tattgccggt aataaactct acgaggctct cacgctcttg ctgcgaaagc ttctttagcc
     2101 gcggattatt gccaagcgat cgagcaatct ccttgattcg atcctggaat tgctccgata
     2161 cggatggcgc cgaacgcacc gaagttgcca cgctcgcgaa cagtatgccc gccatcagaa
     2221 aaagaccaac gcaataaccg gacgacttcc cgacgcatcc tttgcggttc gatcggcgaa
     2281 ataccactgc gccctccccc aattcggatt tcatgtccag ggcatccctt ccaaagtccg
     2341 aaaaccaacc gcggcatgtc tgtgatgcgt tgcccaatac gcgactcatg gccaaatcct
     2401 gcccatggcc aagtcacctt gatcgggtcc cttgcgactc ccttgagtcg ccgcaaaggc
     2461 gtgctcaacc aagttgagtc tgtatctttt atgcttttgc gcgcacagca acgcgcgcgc
     2521 gccccgcgcg ttttggcgcg cggagccgcc gcgtttactg cagaaatagt ctgtaactat
     2581 tgatcgctag ttttcttctt cttagaggat cttttataat atgaggaata atagtctggc
     2641 ctggttcgat ttggattttg gcctactccc aagcagcccc caccaagaca gctttccgcc
     2701 tgatccgaag ttgatttttg tttcttggac gccgcgaacg atgaatcagc cgcggcaaaa
     2761 aacgttataa gcgcactcgc ggctaaaatg ctgattgatt taatcatggc cattcctctc
     2821 cgactaggtt gcttttgacc ggacctgcgg ccgacacgat ggaaacgtct gcacgtccca
     2881 cgctctgcct taagaacccg gtgtcatgtc gtttgatgac ggccgacctt atcacactaa
     2941 agctcggcgc gcatctgttg gacgccggta gcatctcaat tcaccttgag gcgaaagcag
     3001 tacgacaata ccgcactgca ggtcctaacg acctgccgtg ccaatgccga gcacggctag
     3061 gcgcccatac gatcgcgcga acaggccgat ctcattgaac tgaaactgac caagagagaa
     3121 gtgatatgga tcattttgat ttccgccttt gctttccact gacagggacc gccggcggcg
     3181 cggcggcgac ataggcgaga tagagctggg cgaagtcaaa cgccagctgg tagcacacct
     3241 tgagggtacg ggtctcgtcg ttccaactgg cgtcgggtcc gctacagctc aacatttcca
     3301 tggtgaaagg tgcgggccac gcatactcag acgcggatcg tcgagccacg gcttccagta
     3361 tccgaagcgc tcgaaacgaa cgggcgaata tctcaaaatc cccctctgcc tcaccatagg
     3421 cgacattgat tttggtctcc ggttggtccg gcatacgacg atgaggcttg aggaccatgt
     3481 cccacgactg tagcgctttg gtatagtccc gtttgcagct ctgttgacgg gattcaggca
     3541 tcttggcctc gtcggcgaga ctcttgaatt tggcaggatc ggagccaacc attaagcaca
     3601 caatctgata tgcgcgttgc ggactgagat tgtgctcgtc gtagtagagc ggtgtggccc
     3661 ccgtttgctg atcgcgccgg gcgttcagga accaaccttg tgacgcgtcg gcaagcacgc
     3721 gctgggaaaa gctggtgcct atcttgagca tagcgatcgc cgcaaaggtg tcggcctggt
     3781 cctcttctcg cccgagcacc ggcaaattca tttcgctcat ttgcacgtgg cctatttcgt
     3841 gcagcaaaat aaagagtgta ttgccggcga cgaattccac ccgatcgacg agctgctgtt
     3901 gagacaggct cttgagacgc ggataattcc taagtgcgct cgcaacttct tcgattcttt
     3961 cttgaaatga cggtgagcct gatggaggag attgcccaga ggctgctccg cagctaatca
     4021 aaagcataca cagtgtggtg cggatgggga gatgacgcag agatcccatt gtaagtcctc
     4081 cgagaacctc gtcgcgccac aatcataggc ctgagtagag gccgatgtcg agggcagcgc
     4141 gactcggcca gatcacctca tttcgccaaa cgcgaaacca atttcgccga tagattatgc
     4201 cagagagtct cttcttctgc ttgggcgtaa atgccgtgtt gaccgggtcg aggttggacg
     4261 ccaagaggat attctgggct gaaacacagt caccccgaag agcattgaac ctgtcgccga
     4321 acgcttgatc gggcacgcga tctcgacagc ctggtcatat gcattcgcca gatgaatccc
     4381 aagtggctga acgaggtcca tatcctcggg cgcgatcaag tgagcaacac agccttcgca
     4441 ctgagtaacc aacctggcca ggccttgttc aaacggctct gtgcgccgtg ccacgcgatt
     4501 ggagggggtg atcgtgttgg gcccgacttg cgcgacgtaa ccgcgcggcg tgatcgcgct
     4561 tggcttacaa atttcatcag cgatcctaaa aagatgtttg ccgccaaaga tccgactgca
     4621 ctcgctttgg cggctaagtt ccccgcggta cgcatgcctt ccttgggaat ctctgatatc
     4681 gatgcgaggg atctgctttc gtatctggac gcggaatccg cgcgcatcac cgactcgccc
     4741 gcaggcagtg gtccgcaggc tagtcgtcat cagcattgag tagtggcggc atactcgacg
     4801 ttgccccagc gccgccaagt cgaaggctat tgcaaacgtc gcggggctgt aagatcgtcg
     4861 ccgacgagtt cccatctgcg agcgttcgtg cccatgaacc ttccctgcgc gttctgcctg
     4921 cgcgtgttcc tcaaagcgag gccgatcgcc cgcgaacgtg gcacaaacat gtgccgccgg
     4981 cgttagtcgg tggcgatgct gtgtggagca tacacatatg ccccgcgctt gcgtcatttt
     5041 gccgttaggg cggcaatcct catgaatatg agcgtgatcg cggtggcttg gcagagtcaa
     5101 ttctatcgtg atcgtgcagc cgtggatgcg cgcaactccc gcaggggccg aggttgccgg
     5161 aggatacatg acgatcaact aataccggtt ccgggccgga tcgtttgatc ggggttgcc
//
LOCUS       DATILV010000841         2589 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2249959, whole genome shotgun sequence.
ACCESSION   DATILV010000841 DATILV010000000
VERSION     DATILV010000841.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2589)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2589
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2249959"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..459)
                     /locus_tag="VLJ17_20335"
     CDS             complement(<1..459)
                     /locus_tag="VLJ17_20335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25361.1"
                     /translation="MKTLLTVIAGMALCGVALAQDTMQPQTNSTAPQDQQSPVPSPSA
                     QASTGQASGAPRIAPGSVIPVQLTKSIDAKKAKTGDEVDARVTQDLKAGNGELVIPKD
                     TKVVGHVTEVQARSKEQKESQVGIAFDHAVMKNGEDVTLPMSIQAIIAPPT"
     gene            complement(846..>2589)
                     /locus_tag="VLJ17_20340"
     CDS             complement(846..>2589)
                     /locus_tag="VLJ17_20340"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV25362.1"
                     /translation="VAGLGGLLYGVDVGIIAGALPYLEATSGLNAGQLSIVVAAVLLG
                     SVISTLFAGALADWIGRKPLMMLSGLLFVCSIPIIALSHGYQSLVLGRLLQGISAGLI
                     GVVVPLYLAECLSASSRGKGTGIFQWLLTLGIVTAAIVGMFFSIRVEEVAKLGDPARL
                     FAFKDTAWRSIFWVSLPPGILFVIGSLMVSESPRWLFRRGKRDAAYAALLRSRTNEQA
                     DVELAEMEQAAAAEKAKSSTGKIKESLLRRKYVIPFVLACVILACNQATGVNSIIGYN
                     TNILLQSGLSDVQAHWGYVLFTIVNFLMTIGGVLLVDRKGRKFLLSVGSAGIIVSLLC
                     TGVLFRQTEKLRVDSRDAVQAMVDTDQKVTLLYDEKSANALLAAGGGQAISNRPTSLV
                     VIYSYGDFRAATKVARSDDKAAKPIEITRESCVPANKVVAFFSNPFSNLDAARQAPLR
                     IDDALITPVPSTHNGWLVAITLFVFMAFFAIGPGVCVWLALSELMPTRIRSNGMSIAL
                     LINQAVSTSIAAVFLPTVGKHGYSTMFFGFAGCTVIYFITAAVFLPETKGKTLEEIEA
                     YFEGAAGKPDLTAA"
BASE COUNT          568 a          779 c          720 g          522 t
ORIGIN      
        1 agtcggcggc gcgatgatcg cctgtatcga catgggcagc gtcacgtcct ctccattctt
       61 catcacagcg tggtcaaagg cgatgccgac ttgcgattct ttctgctcct tactgcgcgc
      121 ctgaacttca gtgacgtgtc cgaccacctt cgtatccttg ggtataacga gttcgccgtt
      181 cccggccttc agatcttgcg tcaccctggc gtcgacttcg tcgccggtct tcgctttctt
      241 ggcgtcgatg ctcttggtca gttgcaccgg aataacgctg ccgggcgcga tcctcggggc
      301 cccacttgcc tgccctgtgc ttgcttgagc agatggactc ggcacgggac tctgttggtc
      361 ctgcggtgct gtgctattgg tttggggctg cattgtgtcc tgtgcgagag cgaccccgca
      421 tagcgccatt cctgcgatta ctgtcaaaag tgttttcatg gaactctctc cttccgctta
      481 gtgactcatt caacgttcgt ttaacattgc gaagcagcgg agccgatgat tctcttttta
      541 gatgtagttt cgggctcaag ggtcgacacc gaaccaggga cagacgagag taaggcatgc
      601 gcggccgaaa agcgccccgc ggatcggttt agaccggctg aagtgatagg ggtagagcga
      661 atgcgagcgg ccgccaaagc acgtatgccg gtgcgtcctt aaggtgtata ccgtatgtcg
      721 gaaaaataag tcacggtctt gactcctcct tagaccgttg cttaagggtt tgcacgaact
      781 accaggggaa gcagccgaac gcctgacgaa gcgatgatcc cccttcgcaa atccttgccg
      841 gcgcttcatg cagctgtgag gtcaggcttc cccgccgctc cctcaaaata cgcttcgatt
      901 tcttccagag tcttcccctt cgtttccggc aagaacactg cggcagtgat gaaatagatt
      961 acggtgcagc cggcaaagcc aaaaaacatt gtcgagtaac cgtgcttgcc gacggtcggc
     1021 aggaacacgg ccgcaatgct cgttgaaacg gcctggttaa tcaacagggc gatgctcatg
     1081 ccattggagc gaattcgggt cggcatcaat tccgaaagcg ccagccacac gcacactccc
     1141 ggaccgatcg caaaaaacgc catgaaaacg aagagtgtga tggccacgag ccagccattg
     1201 tgggtgctcg gcaccggagt aatcaatgcg tcgtcgatcc ttagcggcgc ctggcgcgcc
     1261 gcgtcgaggt tgctgaacgg attcgagaaa aacgcgacta ctttattggc gggcacgcag
     1321 ctttcgcgcg tgatctcaat cggcttggct gccttgtcgt cggaacgcgc aaccttggtc
     1381 gcagcccgga aatctccata agaataaatg acgaccagcg atgtaggccg gttgctaatc
     1441 gcctggcctc cacccgcagc gaggagcgca ttcgcactct tctcgtcgta aagcaacgtg
     1501 accttctggt cggtgtccac catggcctga accgcgtcgc gagaatccac gcgcagcttt
     1561 tccgtctggc gaaacaatac gccggtgcag aggagcgaca cgatgatgcc ggcgctcccg
     1621 accgacagca gaaacttgcg tcccttgcgg tctaccagca gcacgccgcc aatggtcatc
     1681 aggaaattca cgatcgtgaa caggacgtag ccccagtgtg cctgaacatc ggaaagaccg
     1741 ctctgcaaga gaatgttggt gttgtagcca atgatggagt taacgccggt ggcctgattg
     1801 caagcgagaa tcacgcaggc caggacaaac ggaatcacat atttgcggcg caacagcgat
     1861 tccttgatct tgcctgttga gctcttcgct ttttcagcgg cggcagcttg ttccatttcc
     1921 gccagctcga catccgcttg ctcattggtg cgagagcgga gaagcgcggc gtaggcggca
     1981 tcccttttcc cacggcgaaa cagccaccgc ggagactccg acaccatcag gctgccgatc
     2041 acgaacaaaa tcccgggtgg cagcgaaacc cagaaaatgc tgcgccaagc cgtgtctttg
     2101 aaggcgaaga gtctcgccgg atcgcccagc ttggccacct cttcgacgcg aatgctgaag
     2161 aacatgccca cgatcgccgc cgtcacgatg ccgagtgtca gcagccattg gaagataccc
     2221 gtccccttgc cgcggctcga tgccgacagg cactccgcca aatacagcgg gacaacgacg
     2281 ccgatcaggc cggcgctgat gccctgtaag agtcggccaa gaaccagcga ttgatagcca
     2341 tgcgagagcg ctatgatcgg aatgctgcag acaaacagca gtccgctaag catcatcaaa
     2401 ggcttgcgcc cgatccagtc cgccagcgcg cccgcaaaga gggttgagat cacgctgcca
     2461 agcagcacgg cagcgacaac aatggaaagc tggcccgcat tcaacccgga agtggcctcc
     2521 agataaggca aagcccccgc aataattccg acatccacgc cgtacagcaa tccgcccagc
     2581 cccgctacc
//
LOCUS       DATILV010000842        12885 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3526919, whole genome shotgun sequence.
ACCESSION   DATILV010000842 DATILV010000000
VERSION     DATILV010000842.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 12885)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12885)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12885
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3526919"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..477
                     /locus_tag="VLJ17_20345"
     CDS             <1..477
                     /locus_tag="VLJ17_20345"
                     /inference="COORDINATES: protein motif:HMM:NF014653.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ldh family oxidoreductase"
                     /protein_id="HSV25363.1"
                     /translation="AAQDEPMPVGWMIDRAGHPLTDAKRAGEGFLLPIGDYKGYALSL
                     IIGLLAGTLNRAAFGRDIVDFIKHPNAATNTGQSILALRVDGFCPAEVFKRNVDAAVR
                     MIRESQRLPGVERIWVPGEQSHTKRIERLARGIPIPAALQRNLDELARELGVDPIF"
     gene            1025..1429
                     /locus_tag="VLJ17_20350"
     CDS             1025..1429
                     /locus_tag="VLJ17_20350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018455720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF350 domain-containing protein"
                     /protein_id="HSV25364.1"
                     /translation="MILQSLTGLPVFLAYFCTAFVAVIFYLLVYTRITPHDEFALIRN
                     NVPGAAIALGLSLLGFALPVASVIAHTENLVDCMIWSLIALIVQVIVYFVVRIPIPNL
                     PQRIAAGDLAPAIWLGSASLAAGALSAASISY"
     gene            1453..1800
                     /locus_tag="VLJ17_20355"
     CDS             1453..1800
                     /locus_tag="VLJ17_20355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018316922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25365.1"
                     /translation="MKRSNQVSLVLMAAAGIGAAAYAWGPNDNCRQPAANTVPNDPQQ
                     GAARQVSAQDCRSSRSGSSGRSYSFFSSNSGSTGPDSAGATHLASNASSASVSRGGFG
                     SIGRALASFSGGG"
     gene            1809..2966
                     /locus_tag="VLJ17_20360"
     CDS             1809..2966
                     /locus_tag="VLJ17_20360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HSV25366.1"
                     /translation="MRRIPISARPDWPQLAEQCGFLFHTVDGMPYWDETAYYAFSLKE
                     IEDDLEAPTAALDAMCGELVARAISDERMMKRLGIPERFWNFIAASWKRHDGSLYGRF
                     DLRYDGNGPARLLEYNADTPTSVFETAVFQWNWLNDAVARQIIPRHADQFNSLHERLI
                     ERWKSLVCGRKIHLAGMLDNSEDTGTLAYLEDTARQAGASTNIIAMDKIGRNPKGLFV
                     DETNGPIDIAFKLYPWEWMFREKFGSSLPGSSTRWIEPPWKALLSSKGILPLLWEMFP
                     RHPNLLPAFFEDDPNRAELGNSYVRKPLHSREGANVEVIIDGNVVTADDGPYGVEPKV
                     LQAVAPLPAFDGNHAVLGSWLVGGTPAALSVREDVGPITKNTSRFLPHAIV"
     gene            complement(2976..4514)
                     /gene="rpoN"
                     /locus_tag="VLJ17_20365"
     CDS             complement(2976..4514)
                     /gene="rpoN"
                     /locus_tag="VLJ17_20365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HSV25367.1"
                     /translation="MALIQKLLLRQTQALVMTPQLMQAIKLLQLSHVDLAAYVDGELE
                     RNPLLERPVEDDAVRDDGEPAAEASSTGEEEAAGADWMDERLESRQSIEARLDTDLNN
                     IFPDDGAAAPARATEMQPAAYSEWAALGAGGRSDGEYNLEAFATAETTLAGHLAEQVS
                     MTFTDPVERMIARYLVDLVDDAGYITSDLVDAADKLGASSTQIEAVLAQLQNFDPPGV
                     CARNLTECLAIQLRELDRLDPAMEALLGHLELVAKRDLSALRKICGVDEEDVVEMIGE
                     IKRLNPKPGLAFSSVLVQPIVPDIFVRQGADGAWLVELNHDTLPKVLVNQTYYSKVSK
                     TAKTDTDKSYLTECLQTATWLVRALDQRAKTILKVASEIVRQQDAFFASGVQYLRPLN
                     LKTIADAIEMHESTVSRVTANKYIATARGTFEMKFFFTSAIASADGGEAHSAEAVRHR
                     IKQLIDAESAQDILSDDALVEQLRNAGINIARRTVAKYREAMRIPSSVQRRRDKQAGV
                     KVPG"
     gene            complement(4610..5506)
                     /gene="lptB"
                     /locus_tag="VLJ17_20370"
     CDS             complement(4610..5506)
                     /gene="lptB"
                     /locus_tag="VLJ17_20370"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011155620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HSV25368.1"
                     /translation="MVDLFGLVKRLDVRQPKAPADTRKAVAGFRAHGTVATTRSASDR
                     PKRSPDTGEYRQQPQNYLAVHGVEKSFAGRTVVRGVSLYVRRGEAVGLLGPNGAGKTT
                     VFYMITGLIKADRGRIYLDGYDVTALPMYQRARLGIGYLPQEASIFRGLNVEENIRAV
                     LEMIEPSKRRREADLDSLLEEFNIARLRKTPTIALSGGERRRVEIARALATRPNYMLL
                     DEPFAGIDPIAVGDIQALVRHLTQRGIGVLITDHNVRETLGLTDRAYIIYSGEVLMEG
                     EPEDIVNNPDVRRLYLGEEFRM"
     gene            complement(5598..6275)
                     /locus_tag="VLJ17_20375"
     CDS             complement(5598..6275)
                     /locus_tag="VLJ17_20375"
                     /inference="COORDINATES: protein motif:HMM:NF015901.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptA/OstA family protein"
                     /protein_id="HSV25369.1"
                     /translation="MRGIVALSRITVAVSMLTVTAGIATLHAQQPSGPPNALQGFSQN
                     RDKPIKINSATLEVRDKDKVATFSGAVHLVQGDTTLRSNTLIVFYEDNAAPKPAGTSS
                     ATQAGPQQNQQIKRVEAKGNVIVVQKDQKATGETGVFDMRANTVTLSGNVVISRGPNV
                     VSGDTLTVNMDTGDSLIACDKGQEKCRVKALIQPGSMKPEGRGQETAPAPARETARQR
                     SLQPSGL"
     gene            complement(6272..6907)
                     /gene="lptC"
                     /locus_tag="VLJ17_20380"
     CDS             complement(6272..6907)
                     /gene="lptC"
                     /locus_tag="VLJ17_20380"
                     /inference="COORDINATES: protein motif:HMM:NF018537.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HSV25370.1"
                     /translation="MRNALPAGILTIVVIIIVATFFNPFRLIAAFPIDPGKISLSGTK
                     IVMELPRLNGFTTDSRPYELTARAAAQDLTKPEILELKDINAVVELKDGQRVTIKSIN
                     GVYDTKGELLKLNDHIVLNSTSGYEGYLSEATVNVGTGNIVSESPVEVKLPDGLLNAN
                     RLEVKDNGAVVLFGGGVEMTLTPDSSRSAPQQSAPSGAPAEVSVSRGPLAP"
     gene            complement(7225..7839)
                     /locus_tag="VLJ17_20385"
     CDS             complement(7225..7839)
                     /locus_tag="VLJ17_20385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease H-like domain-containing protein"
                     /protein_id="HSV25371.1"
                     /translation="MTIRLHHGDLPDLSRYRQSVAIDTETMGLDHRRDRLCVVQLSPG
                     DGTADVVQIPRGGSPAANLRALLSDVNILKIFHFARFDLGILQQSLGVMPSPVYCTKI
                     ASRLVRTYTDKHGLKDLTRDLLGIEVSKQQQLTDWGAGNLTDAQVAYAASDVVHLHAL
                     KDKLDTLLVRESREDLAAACFRFLPDRVRLDLAGWAAEDIFSHS"
     gene            8025..8555
                     /locus_tag="VLJ17_20390"
     CDS             8025..8555
                     /locus_tag="VLJ17_20390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015598801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HSV25372.1"
                     /translation="MRRWLVILSFMVVQYPDLAAASAKSQDVPFWRRLVSVLTGTPAA
                     KPTHRDHARPSGSVAVPHSPELSVSGPPNQGLRERSILTGAGCDRGQRIISAYYWEGE
                     HTASGQPFDPNGLTAAHRTLPFGTRLTVTNPRTGQSVVVVVNDRGPFVSGVSLDLSLG
                     AARAIGMRGVTAVCIS"
     gene            complement(9128..10111)
                     /locus_tag="VLJ17_20395"
     CDS             complement(9128..10111)
                     /locus_tag="VLJ17_20395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019998100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HSV25373.1"
                     /translation="MTATQLIEVRDLKVHFRVKTSGLISREVVLKAVDGVSFALAQGE
                     TLGVVGESGCGKSTLGRAVLQLIRPTAGEVVWLGRPIQGLSTAHMRPLRRDMQIVFQD
                     PLAALDPRMTVGEIVGEPFDTFVPSLPKAERRARVQKMMAKVGLSPHMVNRYPHEFSG
                     GQCQRIGIARAMILNPKLIVCDEPVSALDVSIQAQIVNLLMQLQREFNLSLILISHDL
                     SVVRQISHRVLVLYLGRVMEIGSRDELYTGPRHPYTQALISAVPIPDPDREVNKPRCV
                     VTGDLPSPFEPPSGCLFRSRCSRATALCAEVAPPEDRVSESHRVFCHHWRE"
     gene            complement(10108..11121)
                     /locus_tag="VLJ17_20400"
     CDS             complement(10108..11121)
                     /locus_tag="VLJ17_20400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003541890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HSV25374.1"
                     /translation="MAAVLEVKNLNTRFDTPDGEVKAVNDVSLVIAESETVGVVGESG
                     SGKSQVFLTVMGLLAANGRATGSARFRGVELLGMAPHELNRIRGSRIAMIFQDAMTSL
                     NPYLRIGRQMTEVLVTHRGMDQSEARNAAIAMLDRVQIPQAKRRFDMYPHEFSGGMRQ
                     RVMIAMALLCEPDLLIADEPTTALDVTIQAQILDLMRDLKRSGGTAIVMITHAMGVVA
                     GLCDRVLVMYGGRIVEEAPVRDIFYDPQHPYTHGLLRSTLRLDEAITAELRTIPGQPP
                     NLQHLPPGCAFHERCLWHLERCGTEEPAVRPAGPGRRKACHLDHLDRGLDVSRDAGLG
                     HTA"
     gene            complement(11124..12017)
                     /locus_tag="VLJ17_20405"
     CDS             complement(11124..12017)
                     /locus_tag="VLJ17_20405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007692417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HSV25375.1"
                     /translation="MNIFAASRVAAAEEVASRSLWQDAIARLVRNRAAVVSLAVLAVI
                     AVLALLAPWISPHPFDDVFWDDIRTAPDFAKAHWFGTDANGRDLFARTLYGGRVSLLV
                     GVAATAVSLLIGVIYGAIAGYFGGRIDSIMMRLVDVLYSLPFLFFVILLMVFFGRHIV
                     LIFMAIGAVEWLTMARIVRGQTLSIKRREFIEAAHAGGVSTANIIRRHIIPNSIGPVI
                     VYVTLTIPQVILFESFLSFLGLGVQEPYTSWGVLIADGAAEMETAPWMLMFPAIFLAT
                     TLFCFNFIGDGLRDALDPKDR"
     gene            complement(12198..>12885)
                     /locus_tag="VLJ17_20410"
     CDS             complement(12198..>12885)
                     /locus_tag="VLJ17_20410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008599179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HSV25376.1"
                     /translation="KYQDYTVAELIGNGFPVSFRIGITAIVLALIVGGAFGILAALRQ
                     NSLIDHSVMAVAMIGITVPNFVMAPLMTLVIGVYLRLLPAGGYGGGDLRNLILPTVAL
                     ALPQVAYVARLTRASMIEVLRSNYIRTARAKGLPGRLVVGRHALRPAFLPVVSYLGPA
                     IAGIITGSVVIETIFGIPGIGRYFVQGALNRDYTLVMGVVIFYGSLIIILNLLVDLTY
                     GLLDPKIRHD"
BASE COUNT         2598 a         3867 c         3874 g         2546 t
ORIGIN      
        1 gcagcacaag acgagccgat gccggtcggt tggatgatcg atcgggctgg ccacccactc
       61 accgatgcca agcgcgctgg agaaggattc ctcctgccga tcggcgacta caaaggctat
      121 gcgttgtcgc tgatcatcgg ccttctggcc ggaacgctca atcgggcagc attcggccgc
      181 gatatcgtgg acttcatcaa acatccaaac gcggccacaa acactggcca gtcgattctg
      241 gccctgaggg tggacggctt ctgtcctgct gaggtgttca agcgtaatgt tgatgcggct
      301 gtgcgcatga tccgggaatc gcaacgactg ccgggcgtcg aacgcatctg ggtcccgggg
      361 gaacaaagcc ataccaagcg tatcgagcgc ctcgcgaggg gcatcccgat acccgcggcg
      421 cttcaaagga acctggacga gttggcgcgg gaactcggcg tcgatcctat tttctgagct
      481 ggtacgatga ggatccgcac gggaagcgac agacagcctt aaggaaacgt tcaatcggat
      541 aatgaccgca tgaagtggcc gttctcccgc tttgccggaa tgccaacgct catcttaggc
      601 ggccacttcg ttggcgggac gatcgtacgc ggcgaggcgt ttcgactagc catctaaggg
      661 cttcgttcgt gatcggcggt cgagttagtg tactatccgg gattgccaag aactgccgag
      721 cgtcgaacgc gtctggctcc ccggggaaca aatccacact aagcggatcg aaggcttcat
      781 tcgcggcaag ctgatacctg cggtgcttca aagaaacctg gacgagctaa cgcaagcact
      841 caacattgtt ctcattttct aagccgggct gatggatttg tggtcggcag gctgcgtcgc
      901 gacaagtttt ccacggaaaa agaaatgcga cacggtcgcg aagttatttt tgaattctca
      961 aactcgttag tctcctatgt cactcacctc acaacgcaac ggcgcgacca acggggcgga
     1021 caatatgatc ttgcagtctt tgaccgggct accggtgttt ctggcgtact tctgcaccgc
     1081 gttcgtggcc gtcatctttt acctactggt gtatacgcga atcacgcctc acgatgaatt
     1141 cgcgctgatc cgaaacaacg tgcccggcgc cgctatcgcg ctgggcctaa gcctgcttgg
     1201 cttcgcgtta ccggtggcaa gcgtgattgc gcatacggaa aatctggtcg attgcatgat
     1261 ctggagcctg atcgccctga tcgtgcaggt tatcgtctat ttcgtggtga ggatcccgat
     1321 ccccaacctg ccgcagcgca ttgcggccgg cgacctcgcg ccggcgatct ggctcggatc
     1381 ggcgtcgctt gcggctggcg cgctgagcgc cgcatcgatt tcgtattgag acggggcagc
     1441 aggaatcggc cgatgaaacg ctccaaccag gtttcgctgg ttctgatggc ggctgccggt
     1501 atcggtgccg ccgcatatgc gtgggggcca aacgataact gtcgtcagcc ggctgcgaac
     1561 acagtcccga acgatccgca gcagggtgcg gcccggcagg tgtccgcgca ggattgtcga
     1621 tcttcgcgga gcggttcatc gggccgcagc tattcgttct tctcctccaa ttccggatcg
     1681 accggcccgg actcagccgg tgcgactcat ctggcttcga acgcgagctc agcttcggta
     1741 agtcgcggcg gatttggatc gatcggacgg gcgttggcat cgttctcggg cggggggtga
     1801 tcgcatcaat gcggcgcatt ccgatcagcg cgcgcccgga ttggccgcag ctcgccgagc
     1861 aatgcggatt tctgtttcac accgtcgacg gtatgcccta ttgggacgaa acggcctact
     1921 acgcctttag ccttaaggag atcgaggacg atctcgaagc cccgaccgca gcactcgatg
     1981 ccatgtgcgg cgagctcgtg gctcgtgcga ttagcgacga gcgcatgatg aagcggctcg
     2041 gcatacctga gcggttctgg aatttcatcg cagcgagctg gaagcggcac gacggcagcc
     2101 tctacggacg gttcgatctg cgctacgatg gtaacggtcc ggctcgcctg ttggagtata
     2161 acgccgacac gccgacatcg gtgttcgaaa ccgcggtatt ccaatggaac tggcttaacg
     2221 atgcagtggc acgccagatc attccgcgcc atgccgacca gttcaattcg ctgcatgagc
     2281 ggctgattga acggtggaag tcgctcgtgt gcggcaggaa aattcacctc gccggaatgc
     2341 tggacaattc ggaggacacc ggaacccttg cgtatctgga ggataccgca agacaggccg
     2401 gcgcgagcac caacattatc gccatggaca agattggtcg caatcccaaa ggcctgttcg
     2461 tcgacgaaac caatgggccg atcgacatcg cattcaagct ctatccttgg gaatggatgt
     2521 tccgcgaaaa attcggctcc tccctgccgg gttcgtccac gcgatggatt gagccgccct
     2581 ggaaagccct cctgtccagc aaaggaattc tgcccttgtt atgggagatg ttcccgcgcc
     2641 accccaacct gctgccagcg tttttcgagg acgatcccaa ccgcgcagag ctgggcaatt
     2701 cctatgtgag aaagccgctc cattcgcgcg aaggcgccaa tgtggaagtc atcatcgacg
     2761 gcaacgtcgt caccgctgat gacgggccct atggcgtgga acccaaggtc ctgcaggcgg
     2821 ttgcaccact gccggcattc gatggcaacc atgcggtgct gggctcctgg ttagtcggtg
     2881 gcacgccagc cgcactttca gtgcgcgaag acgttggtcc gattaccaag aacacgtcgc
     2941 gatttctgcc gcatgcaatc gtttaatcaa tcaattcaac ctgggacttt aaccccggcc
     3001 tgcttgtcgc ggcgacgttg gacggaagaa gggattcgca tcgcttcgcg atatttggcg
     3061 acggtgcggc gcgcaatatt aatgccggca ttgcgcagtt gctcaaccag cgcatcgtcc
     3121 gacaaaatgt cttgggcaga ctctgcatcg atgagctgct tgatgcgatg ccgtacggct
     3181 tccgccgaat gggcctcgcc gccgtccgca gaagcgatcg cggacgtgaa gaagaatttc
     3241 atttcgaaag tgccgcgagc ggtcgcgatg tatttattgg cggtgacgcg tgacaccgtc
     3301 gattcgtgca tttcgatcgc atccgcgatg gtcttgagat tgagcggccg cagatattgc
     3361 acgccgcttg cgaaaaaagc gtcctgctga cgtacgatct cgctcgccac cttgaggatt
     3421 gtcttggcgc gttgatcgag tgctcgcacg agccatgtgg cggtctgtaa gcattcggtc
     3481 aggtacgatt tatcggtgtc tgtcttagcg gtctttgaaa ccttggaata atatgtctga
     3541 ttgaccagca ctttcggcag ggtgtcgtga ttgagttcga ccagccaggc gccgtcggcg
     3601 ccttggcgca cgaatatgtc gggtacaatc ggctggacca ggacggagct gaaggcaagc
     3661 cccggcttcg gattaaggcg tttgatctca ccgatcattt ccacgacgtc ctcctcatcg
     3721 acgccacaga tcttgcgcaa ggctgaaagg tcccgcttgg caaccagttc gaggtgaccg
     3781 agcaaagcct ccatagccgg gtccaaccgg tccagctcgc gcagttgaat ggccaggcat
     3841 tcggtaaggt tgcgcgcaca cacccccggc gggtcgaaat tctgcaactg ggccagcacc
     3901 gcctcgatct gtgtcgacga agcgccgagc ttgtcggctg cgtcgaccaa gtcgctcgtg
     3961 atgtaacctg catcatccac gagatcgacg agataccggg cgatcatccg ctcaaccggg
     4021 tccgtgaagg tcattgaaac ctgctcagca agatgcccgg caagcgtggt ctccgcagtc
     4081 gcaaacgctt ccaaattata ttcgccgtcg ctgcggccgc ccgcgccgag cgcggcccat
     4141 tccgaatagg cagctggctg catttctgtt gcgcgcgccg gtgcagccgc gccgtcatcg
     4201 ggaaatatgt tgttaaggtc ggtgtcgagc cgcgcctcga tcgactgacg actctccaat
     4261 cgctcgtcca tccaatcggc acctgcggct tcttcctcac cggtcgagga tgcctcggcg
     4321 gcgggttcgc cgtcatcgcg gaccgcatcg tcctcgactg gccgttccaa caacggattg
     4381 cgctccaact ccccgtccac ataggccgca aggtcgacat gggacaactg cagcagcttg
     4441 atggcctgca tcagctgcgg cgtcatcact agcgcctggg tctggcggag cagaagtttt
     4501 tggattagcg ccattgggtg tacgtgaaaa tggtccggtt cttgcttatc cggatttccg
     4561 acgcctgtat acccaactat cgcctagcac ttaagaagaa gttgcaagac tacatacgaa
     4621 attcctcgcc cagataaagg cgacggacgt ctggattgtt gacgatgtcc tcgggctccc
     4681 cctccatcag gacttcgccc gaataaatga tgtaggcgcg gtcggtcagg ccgagcgtct
     4741 cgcgcacatt gtggtcggta atcagcaccc cgatgccgcg ctgggtaaga tggcggacca
     4801 atgcttgtat gtccccgacg gcgatgggat caataccggc gaacggctcg tcaagcagca
     4861 tatagttcgg tcgcgtcgcc agcgcgcgcg cgatttcgac gcgtctgcgt tcaccgcccg
     4921 acagcgcgat ggtcggggtc ttgcgtagcc gggcgatatt gaactcctcc agcaggctat
     4981 caagatcggc ttcgcgccgg cgcttgctcg gctcgatcat ttcgaggacg gcgcgaatgt
     5041 tctcttcgac gttcaggccg cgaaaaatgg aggcctcttg cggcaaataa ccgatgccga
     5101 gccgagcgcg ctgatacatg ggcagtgccg tgacatcgta gccgtccagg taaatccggc
     5161 ctcgatcagc ctttatgagg ccggtgatca tatagaacac cgtggtcttg ccggcgccgt
     5221 tggggccgag caggccgacc gcctcgccgc gacggacata gaggcttacc ccgcgcacga
     5281 ccgtgcgacc ggcaaagctt ttttcgacgc catgaaccgc aagataattt tgcggctgct
     5341 ggcggtattc accagtgtcc gggctacgtt tgggacggtc ggatgcggat ctcgtcgtcg
     5401 ccaccgtccc gtgggctctg aacccggcaa cggccttgcg tgtgtccgcc ggcgctttgg
     5461 gctgccggac atcaaggcgt ttgacgagac caaacagatc gaccacaagc gcctcgataa
     5521 caacggtgcc ggagggaatt tacgagggtg atagtctctc tatccgcggc tttcaattgc
     5581 gctgggttcg ggcgtcatta gagccccgac ggttgcaaag atcgttgccg cgccgtttcg
     5641 cgggccggag caggggcggt ttcctgcccg cgcccttctg gcttcatgga gcccggttgg
     5701 atcaaggcct tcacccggca tttctcctgt cctttgtcgc aggcaataag cgagtcgccg
     5761 gtgtccatat taaccgttag agtgtcgcct gatacgacgt tcggtccccg agaaataacg
     5821 acattccccg acaaagtcac cgtattggct cgcatgtcga atacgcctgt ttcgccagtg
     5881 gctttctggt ccttttgcac cacgattaca ttgccctttg cttcgacccg cttgatctgc
     5941 tggttctgct gaggcccggc ctgggtggcg ctggaagtcc cggcgggctt tggcgcggca
     6001 ttgtcttcat agaagacaat gagcgtattg ctacgcaagg tggtatcgcc ctgaaccaga
     6061 tgaacggcac cggaaaacgt tgcgaccttg tccttgtcgc ggacctcgag cgtggccgag
     6121 ttgattttga tcggcttgtc acggttttgc gagaatcctt gcaaagcgtt gggtgggccg
     6181 ctgggttgct gcgcatggag cgtggcaatg cccgccgtca ctgtaagcat cgagaccgct
     6241 accgttatcc tgctcaacgc aacaatgccc ctcatggtgc caacggtccc cgcgaaactg
     6301 aaacctcagc cggagcaccc gaaggtgcag attgttgtgg agctgaccgc gatgagtccg
     6361 gggtaagcgt catctcgaca ccaccgccaa agaggaccac ggccccgttg tctttcactt
     6421 ccagccgatt ggcgttgagc aagccgtcag gaagcttcac ctccaccggg ctttcggaaa
     6481 cgatattgcc ggtgcccaca ttgacggttg cctccgataa atatccctcg tagccggagg
     6541 tcgaattcag aacgatatgg tcgttcagct tcaacaactc gcccttggtg tcgtagaccc
     6601 cattgatgga tttaatcgta acacgctgcc catccttgag ctccaccaca gcgttgatgt
     6661 ccttgagctc cagaatttcc ggcttggtca aatcctgggc agcagcacga gcggtaagct
     6721 catagggccg cgaatcggtg gtaaaaccat tgagtcgggg caattccatg acaatcttag
     6781 tgcctgacag cgaaatcttg ccgggatcga tcgggaaggc cgcaatcagg cggaacgggt
     6841 tgaaaaatgt cgcgacgatg ataatcacga cgatcgtcag gatgccggcc ggaagggcgt
     6901 tgcgcaaaaa gcggacaaaa cgactgtgtc gcgccgcggc tcgaaacacg cggtcaccgt
     6961 cgttccgccc gatctgacgc cgtgtgcgcg aaggcggcga aggaatcatc gaagggtagt
     7021 tcagcctgcc cccctggaca tcgtttcagt gaagatttgc caaggcgcca ttatagcacg
     7081 tgcctcgtta aaaccccaaa ggcatccagg tgccgccatc tctggtgccc tggcgcgccc
     7141 cttgccccct gtcgcccaac catgaaaccc caaccctgcc gcccgaatat ggctgccgcg
     7201 gggccatgct gaattttaga aaaatcagct atgggaaaag atatcttctg ccgcccaacc
     7261 agccagatcg aggcgaaccc ggtcgggtag aaatcgaaaa caggccgccg cgaggtcctc
     7321 ccggctctcc cgcacaagca acgtatcaag cttgtccttc agggcgtgca gatgaaccac
     7381 gtcggacgcc gcataggcaa cctgagcgtc tgtgagattt ccggcacccc agtcggttag
     7441 ctgttgttgc ttggagacct cgatgccaag gaggtcgcga gtcagatcct tgagcccgtg
     7501 cttgtcggtg taagtccgca ccagccgcga ggcgattttc gtgcaataaa cagggctcgg
     7561 catgaccccc aagctttgct gcaaaatgcc caagtcgaat ctggcaaaat gaaatatttt
     7621 caatatgttg acgtccgata gcagcgctct tagattggcc gcggggctgc cgccgcgtgg
     7681 aatttggacc acatcggccg tgccatcgcc aggcgaaagc tggaccacgc agagccggtc
     7741 ccgacggtgg tcgagcccca tcgtttccgt atcgatggca acggattgcc ggtagcggga
     7801 taagtctggc aggtcgccat gatgtaggcg gatcgtcatg tttctctcgt tacctttgtc
     7861 gattcgtaat tcataggccg agattgattt atcgcaacct gtctaaaaaa gcggtttctc
     7921 gtccgcgccc ctgcccgggc attactgcca caattcccct accccaccac gattgtcgtc
     7981 cgcgtcagtg tgtgccagaa gcgggcacca gtggatggat catcatgcga cgatggcttg
     8041 tcatcctcag cttcatggtt gtgcaatatc cggacctcgc cgcggcgtca gcgaaatcgc
     8101 aggacgttcc gttttggagg agattggtct ccgtgctgac gggcacaccg gcggcaaagc
     8161 caacgcaccg tgatcatgca cgaccatccg ggtctgtcgc ggtgccgcac tctccggaac
     8221 tgtccgtctc cggcccccca aatcagggac tccgagaaag atcaatccta actggcgccg
     8281 ggtgcgaccg cggccagcgg atcatttcgg catattattg ggagggcgag cacaccgcca
     8341 gcggacagcc attcgatcca aacggcctca ccgccgccca tcgcacgctc ccgtttggca
     8401 cgcgactgac cgtgacgaac ccgaggactg ggcaatccgt tgtcgtggtc gtcaacgacc
     8461 gcggcccttt cgtttcaggc gtgagcctcg atctcagtct tggcgccgcc cgggctatag
     8521 gaatgcgggg cgtcacagca gtttgcatct cctgatgcag cacccccaaa tcggctaaac
     8581 tggaccgcaa gcttccggtg gctgatgagc cgaaatgccc gcgcccaaaa ttgagagcat
     8641 catgaaggct gggcgccgca acgtccgaag caattttgtt aacctcattg ccgtgaggag
     8701 cgaggaacac cagcgtgaac caccactaga aaaatttccg tcatcgggcg cggctatgtc
     8761 ggtctgcctg tcgacgtcgc ctttgcgagg tcgggagtgc ccccgtaatc gactttgata
     8821 tcgacaagcg ccgtatcgcc gagttgagag cgggcgcgat cggtcgcccc cctaaatacg
     8881 catgatctct gcccaataga cttcgtttct ggcctcgaga gagcaagctt gtcgcacttt
     8941 gatgatgagc tcggcaatcc agtcacgaca cccggtgcgc atccgttttg attgtcggag
     9001 cgagccaatt agtctacctc ccaacgcaag ctgacgtttg ccgcgttctg atcagttggc
     9061 cgctgagacg caaccagtag cggtgacaag cggggagttg catgtggaag ggccgtttga
     9121 cccgttatta ttcgcgccaa tgatggcaga acacgcggtg gctttcgctc acgcgatctt
     9181 ctggcggcgc cacctcggcg cagagcgccg ttgccctaga gcagcggctg cggaacagac
     9241 agccgctcgg cggctcgaag ggtgacggca gatcgccggt gaccacgcat cgcggcttgt
     9301 tcacctcgcg gtcggggtcc ggtatcggca ccgcggaaat caacgcctga gtatagggat
     9361 ggcgcggccc cgtatagagc tcgtcgcgac tcccgatctc catcacgcgg ccgagataga
     9421 gcaccaagac gcggtggctg atctgcctca cgacgctgag atcgtgggag atcaggatca
     9481 gcgacagatt gaactcgcgc tgcagctgca tcagcaggtt gacgatctgg gcctggatcg
     9541 agacgtcgag tgccgagacc ggctcgtcgc agacgatgag cttgggattg aggatcatgg
     9601 cgcgcgcgat gccaatacgc tggcactgac cgccagagaa ttcgtgcggg tagcggttca
     9661 ccatgtgcgg gctgaggccg acctttgcca tcatcttttg tacccgcgcc ctgcgttcgg
     9721 ccttcggcag cgacggcacg aaggtgtcga agggttcgcc cacgatctct ccgaccgtca
     9781 tgcgcggatc gagggcggca agcgggtcct ggaacacgat ctgcatgtca cggcgaagcg
     9841 ggcgcatgtg ggcagtactc agcccctgga ttggacggcc aagccaaacc acctcgccgg
     9901 cagtgggccg gatgagctgg agcacggcgc ggccgagcgt tgacttgccg cagccggatt
     9961 cgccgacgac gcctagggtc tcgccctgcg ccagcgcgaa gctgacgcca tctacggcct
    10021 tgagcacgac ctcgcgcgat atcagtccgc tggtcttgac ccggaaatgc actttgaggt
    10081 cgcgcacctc gatgagctgg gtcgccgtca tgcggtatga cccagcccag catcgcggct
    10141 cacgtccaaa ccgcgatcga ggtgatcgag gtgacaggcc ttgcggcgtc ccgggcctgc
    10201 cggacgcacg gcgggctcct cggtgccaca gcgctccaaa tgccagaggc agcgctcatg
    10261 gaaggcgcag cccggcggta aatgctgcag attgggcggc tggcctggaa tggtgcgcaa
    10321 ctcggcggtg atcgcctcgt cgagccgcag cgtcgagcgc aacaaaccgt gcgtataggg
    10381 atgctgcgga tcgtagaaaa tgtcgcgcac cggcgcctcc tcgacgatgc gtccgccgta
    10441 catcaccagc acacggtcgc acagccctgc caccacgccc atcgcgtggg tgatcatcac
    10501 gatggcagtg ccgccactgc gcttaagatc gcgcatcagg tcgagaatct gcgcctggat
    10561 ggtgacatcg agtgccgtgg tcggctcgtc ggcgatcaac aggtcaggct cgcacaacag
    10621 cgccatggca atcatgacgc gctggcgcat gccaccggaa aattcgtgcg gatacatgtc
    10681 gaaccggcgt ttggcctggg gaatctgcac gcggtcaagc atcgcgatcg cggcgttacg
    10741 ggcctcactc tggtccatgc cacggtgggt caccagaact tccgtcatct gccggccgat
    10801 ccgcaaatag ggattgagcg acgtcatggc gtcctggaat atcatggcaa tgcggcttcc
    10861 gcggatgcgg ttgagctcgt gcggcgccat gcccagcagt tcgacgccgc ggaagcgggc
    10921 gctaccggtc gcgcgtccgt tcgcagccag aagtcccatc acagtcagga acacctggct
    10981 ctttccggat cctgattctc ccaccacgcc gaccgtctcg ctctcggcga tcaccaatga
    11041 aacgtcgttt acagccttga cctcgccgtc cggcgtgtcg aagcgggtgt tgagattttt
    11101 gacctccagc accgccgcca tgctcaacgg tccttggggt cgagcgcgtc gcgcaaccca
    11161 tcgccaatga agttgaagca gaacagagta gtagcgagga aaatggcagg aaacatcagc
    11221 atccagggtg cggtctccat ttcggcggct ccgtccgcga taagtacgcc ccagctcgtg
    11281 tagggctcct gcacgccgag gccgaggaag gacaagaagc tttcgaacag gatgacctgc
    11341 gggatggtaa gggtcacata gacgatcacc gggccgatac tgtttgggat gatgtggcgc
    11401 cggatgatgt tggcggtgga gacgccgccc gcatgggcgg cctcgatgaa ctcgcggcgc
    11461 ttgatcgaca atgtctgacc tcgcacgata cgcgccatcg tgagccattc gacggctccg
    11521 atcgccatga agattaatac gatatggcgg ccaaaaaaca ccatcagcag gatcacgaag
    11581 aacaggaacg gcaacgaata gaggacgtca accagacgca tcatgatgct gtcgatgcga
    11641 ccgccgaaat agcccgcgat ggcgccgtag ataacgccga tcaataggct cacagcggtc
    11701 gccgccacgc ccaccagaag cgagacgcga ccgccataaa gggtgcgggc gaacagatca
    11761 cggccgttgg cgtcggtgcc aaaccaatgc gccttggcga agtcgggagc cgtgcgtatg
    11821 tcatcccaga atacatcgtc gaaggggtgc ggcgaaatcc atggcgccag cagcgccagc
    11881 accgcgatga ccgcaagcac cgcaaggctt accacggccg ctctgttgcg cacgaggcgc
    11941 gcgatcgcat cctgccagag cgagcggctg gcgacttctt cggcggcggc aacacgcgat
    12001 gcggcaaaaa tgttcatgcg ccggcgccct tcgcgtcacg cgctctaacg gcgatcgatt
    12061 catttccgct cgtcccgtcc cgctttcgcg agtgcgaact gcggcggcgc cccacgtaca
    12121 agcaccgact aaaaaggtag gtgccagctt tgttcggaaa gcgatgaccg cgccgcacgg
    12181 agtttcggat gcgcgggtca atcatgacgg atcttcggat cgagcaggcc gtaggtgaga
    12241 tcgaccagca ggttgagtat gatgatgagc gatccgtaga agatcaccac tcccatgacc
    12301 agcgtatagt cgcggttgag ggcgccttgc acgaaatagc ggccgatgcc cggaatgccg
    12361 aagatcgtct cgatcaccac cgacccggtg atgatgccgg cgatggctgg gccgagataa
    12421 gagaccaccg gcaggaaggc ggggcgcagc gcatggcgcc cgaccacgag gcgtcccggc
    12481 aaacctttag cgcgggcggt acggatgtaa ttcgaccgca gcacctcgat catgctcgct
    12541 cgcgtgagcc gggccacata ggcgacctgc ggcagggcca gcgcgacggt cggcaggatc
    12601 aaattgcgca gatcgccacc gccatagccg ccggccggca gcagtcgcag atagacgccg
    12661 atgacgagcg tcatcaacgg cgccatcacg aagttcggca ctgtgatgcc gatcattgca
    12721 accgccatga cggagtggtc gatcaagctg ttctggcgca gcgccgccag aatcccgaag
    12781 gcgccgccga cgatcagcgc caacacgata gcagtgatgc cgatccggaa cgacaccggg
    12841 aagccgttcc caatcagctc ggccacggtg taatcctggt actta
//
LOCUS       DATILV010000843         3797 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3280167, whole genome shotgun sequence.
ACCESSION   DATILV010000843 DATILV010000000
VERSION     DATILV010000843.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3797)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3797)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3797
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3280167"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..304
                     /locus_tag="VLJ17_20415"
     CDS             <1..304
                     /locus_tag="VLJ17_20415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25377.1"
                     /translation="HHDNLSVFKERIYLDETNKNIMRNEITVYDHALTRPWTVTRSYV
                     RNPNPRPDWNEFICGEGNLWTKIGNEAYFLSADGLLMPTRKDQPPPDNSYFKQPRN"
     gene            841..2532
                     /locus_tag="VLJ17_20420"
     CDS             841..2532
                     /locus_tag="VLJ17_20420"
                     /inference="COORDINATES: protein motif:HMM:NF017081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV25378.1"
                     /translation="MSESGPAMVDHGLMAVGPATSQQRHDALRRHLQALPTAVLGIGY
                     LAVYVLLDWVSFIAPYGAFDITPWNPNTGLSVTVILLFGRRMIPFLFAAPLLGDVVVR
                     RFPMPIPLEIATATLIGGVYGAALLYLMHPKRRFDRALQSMSDLVLLSSVALVSSTLV
                     ALGYVGLVLGAGLMPASDFVVATLSYWVGDMIGIMAMTPFVLLWWTRGNVLRISIESL
                     LQLAVTAATLVLVYGYWATQQLQFFYLLVLPIVWIAIRTGIEGVSLAVFVTQLGLVAG
                     LNFFPESISELPKLQAFMLVLALTGLFAGELVTEHRRTEAQLRLHQESHARLAQLGSM
                     GELASAVAHELNQPLMAAGTYTRLVDRAIRAGHPDPDMVAETSKKAVAQVERAAEVVR
                     RLRALVRLDHSSRIACRVDHIVRETVKLCKPDLDRLVVHVHQTVAADLPLVMVDLLQI
                     EQALLNLMRNSLDAIGAAGYGTISIEATATRKDFVEVCIRDTGPGFPTGVVPNLFLPS
                     FSHKTEGLGFGLPLCRSLIEAHGGRIWIDVNSPGAAVHFTLPIAQHPLTGPLPNG"
     gene            2525..3142
                     /locus_tag="VLJ17_20425"
     CDS             2525..3142
                     /locus_tag="VLJ17_20425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013214945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV25379.1"
                     /translation="MAEPIQLVLIDDDYAVLDSLRLYFARLDFKTDCFASAEAFFTAL
                     DGGLKPDCIVSDVRMTGMSGLELVRRLADRRSVVPVILMTGVGDIDMAVSAIKLGAFN
                     FIEKPFDEGRLLTDIQKAVAMGRQQAYDAAEIEKLRSRFKTLSERQRQVMELAVAGLS
                     NKEIGLQLDISPKTVENHRAWVMERIGAKNLAELVRIAMKIDGRS"
     gene            complement(3472..>3797)
                     /locus_tag="VLJ17_20430"
     CDS             complement(3472..>3797)
                     /locus_tag="VLJ17_20430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="PQQ-dependent dehydrogenase, methanol/ethanol
                     family"
                     /protein_id="HSV25380.1"
                     /translation="PATGELKQRKSMAYANTSGALATAGGIVVTALIEGTVMALDDET
                     LEELWSFNVGTGINAPPMTYAVDGKQYIAIATGLTRNSMGRLATTPEKRNLGRSATMI
                     FVFSL"
BASE COUNT          737 a         1145 c         1090 g          825 t
ORIGIN      
        1 gcatcatgat aacctgtcag tcttcaagga acgcatctat ctcgacgaga ccaacaagaa
       61 catcatgcga aacgagatta ccgtttacga tcacgccttg acacgccctt ggaccgtgac
      121 ccgtagctat gttcgcaatc ccaacccgcg ccccgattgg aatgaattta tctgcggcga
      181 aggcaatttg tggacgaaga tcggcaacga agcctatttt ctgagcgccg atgggctgct
      241 gatgcccaca cggaaggacc aaccgccgcc cgacaacagt tattttaagc agccgcggaa
      301 ctaatgcgct ggaaccgcag cccgacggaa gccgaatccg cgatcagact ctctggatgg
      361 agatagcgtc gcaccccgat tcctgccgca ctgcaatgcg caggtgaggc tttcccgata
      421 gcccccggcc ggattgccgc aatgcagtca aaaaaatata ccccgccgaa gcggggccag
      481 aattggggga tctcttcagg tcaatccctt cttccagtgg ggccggaagt gtggggggga
      541 ctggccccga ggctcatcac ggtgagggca ccgtgctttt tgttctacac cgcctcgtat
      601 gaacaaccgt aatgggttga cgctcggcct caactcggga tgcacacttg ggggaaaacc
      661 ctcatgcctg gatggatttc gttcgcggct ccccgccaag acccgcagaa gaataagctt
      721 tgcgcggtcc ggtccattca tggcatgatg ccatcccggc gccacctagg ggaaaaccac
      781 cagatctccc tctgctgcga gaaatgcgac cggaactttt ctattttctg ggaaacctcc
      841 atgagtgaat ccggcccggc gatggtcgat cacggcctca tggcggtcgg cccggcgacc
      901 tcgcagcagc ggcacgatgc gctccgccgc cacctgcagg cgctgcccac cgctgttctg
      961 ggcatcggat accttgcggt ctatgtgctt ctcgattggg tcagcttcat cgcgccttat
     1021 ggggcgttcg atattacgcc ctggaatccc aacacgggcc tgagcgtcac cgtcattttg
     1081 ctgttcggcc ggcggatgat cccgtttctg tttgccgcac cgttactcgg cgacgtcgtg
     1141 gtccgtcggt tcccgatgcc gatcccgctg gagatcgcaa cggcgaccct cattggcggc
     1201 gtctacggcg ccgccctgtt gtacctgatg cacccgaagc ggcgcttcga ccgtgccttg
     1261 cagtcgatgt ccgatctggt tcttctatca tcagtggctt tggtgagcag caccctcgtt
     1321 gcgttgggct atgtcggctt ggtgttaggg gccggcctga tgcccgcatc agatttcgtc
     1381 gtcgcgacac tgagttattg ggttggcgat atgatcggaa tcatggcgat gacgccgttt
     1441 gtgctgcttt ggtggacgcg cggcaatgtg ctgcgcattt cgatcgagtc cttgctgcag
     1501 ctcgctgtga ccgccgctac gcttgtgctc gtctatggat actgggctac tcaacaactt
     1561 caatttttct acctgctcgt tctgcctata gtatggatag cgatacgaac cggaattgaa
     1621 ggcgtcagcc tcgcggtctt tgttacccag ctcggactgg tcgcggggct gaatttcttc
     1681 ccagaaagca tctctgaact gccgaaactc caggcgttca tgctggtgct tgcattgacg
     1741 ggccttttcg ctggggaact tgtgacagag caccgtcgca ctgaagccca attgcgcttg
     1801 catcaggaat ctcatgcacg cctcgcgcaa ctcggcagca tgggagagct tgcctctgcg
     1861 gtggcgcacg agctgaatca gcccctgatg gcggcgggca cttatacgcg gctggtcgac
     1921 cgcgccatcc gcgctggcca tccggaccct gacatggtcg ccgaaacctc aaaaaaagcg
     1981 gttgcgcaag tcgaacgcgc tgccgaggtc gtgcgacgac tgcgggcgct cgtgcgcctc
     2041 gaccacagca gtcgcatcgc ctgccgggtt gatcacatcg tgcgggaaac cgtcaagctg
     2101 tgcaagcccg atctcgatcg cctggtcgtg cacgtccatc agactgtcgc ggccgatctg
     2161 ccgcttgtga tggtcgacct gctacaaatc gaacaggcat tactcaatct tatgcgcaac
     2221 tccctcgatg ccatcggcgc ggctggatac ggaacaatct cgatcgaagc gacggccacg
     2281 cgaaaggact tcgtcgaggt gtgcatacgc gataccggcc ccggattccc gaccggcgtg
     2341 gtccccaatc tgtttctgcc aagtttctcg cacaagacgg aaggcctcgg ttttggtttg
     2401 ccgctatgcc gctctctcat cgaggcccac ggcggccgca tttggatcga tgtcaattca
     2461 cccggcgccg ccgttcattt caccttaccg atcgcccagc atcccctcac cggaccattg
     2521 cccaatggct gaaccgatcc agcttgtgct gatcgacgac gattacgccg tactcgattc
     2581 gctacggctc tatttcgcgc gtttggactt caagaccgac tgctttgcat ccgcggaggc
     2641 gtttttcacc gcgctcgacg gcggcttgaa gcccgactgc atcgtgtcgg acgtccgcat
     2701 gacaggcatg tcgggcctcg aactggtccg tcgtctcgct gaccgccggt ccgtcgtacc
     2761 tgtcatcctg atgaccggcg tcggcgacat cgacatggcg gtttccgcta tcaagctcgg
     2821 cgcgttcaac ttcatcgaaa agccgttcga cgagggccgc ctgctcaccg atattcaaaa
     2881 agccgtggcg atgggacggc agcaggccta cgacgcggcg gaaatcgaaa agctcagatc
     2941 gcgcttcaag acgctgtctg agcggcagcg acaggtgatg gaactcgccg tcgccggatt
     3001 gtcgaacaag gaaatcggat tgcagctcga catcagtccg aagaccgtgg aaaatcaccg
     3061 cgcctgggtc atggagcgta tcggtgcgaa gaatctcgct gaactcgtgc gcatcgccat
     3121 gaagatcgat gggcggtcgt agcaataccc gcgacgtgtt ggtgcaatat gacttgtgac
     3181 ggcggaactt gctccgcgcc attctttcaa caccacggat gtcgctggtg cgagtccttc
     3241 tctttgccat cgagtccaaa gacaatcaaa cgcttataaa tatgcttgct aacgaatttg
     3301 tggtcataga ggcacgcgga cttaaagcgt aagattcttg cgaggagcaa gaatcacgcg
     3361 aagaaaatgt tggaatctgg acttgatccg aacgttaggg agtgggaggt ttaggccaag
     3421 ctaagccgca tgcgcccgcg catcgagccc gatgcaggcg ccccctttcc attacagact
     3481 gaatacaaag atcatcgtcg cgctcctacc gagattgcgt ttctccggcg tggtcgcgag
     3541 ccggcccatg gaattgcggg tgaggccggt ggcgatcgcg atgtattgct tgccgtcgac
     3601 cgcataggtc atgggcggcg cgttgatgcc ggtaccgaca ttgaagctcc aaagttcttc
     3661 gagggtctcg tcgtcgagcg ccatcacggt gccttcgatc agcgccgtta ccacgatgcc
     3721 gccagcggtg gcgagcgcgc cgctcgtgtt cgcatacgcc atcgacttac gctgcttgag
     3781 ctctccggtg gccggat
//
LOCUS       DATILV010000844         2385 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3280371, whole genome shotgun sequence.
ACCESSION   DATILV010000844 DATILV010000000
VERSION     DATILV010000844.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2385)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2385)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2385
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3280371"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..335)
                     /locus_tag="VLJ17_20435"
     CDS             complement(<1..335)
                     /locus_tag="VLJ17_20435"
                     /inference="COORDINATES: protein motif:HMM:NF014617.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25381.1"
                     /translation="MQLEKIREAAERVARSEGLEVVDVEWKIGKQRFLRVYIDRLPAS
                     TAVINGQPDPYPKISHADCERVSQQLSVILDVEELIPGPGYVLEISSPGMDRALRKQA
                     DYERFAGRSA"
     gene            complement(536..1150)
                     /locus_tag="VLJ17_20440"
     CDS             complement(536..1150)
                     /locus_tag="VLJ17_20440"
                     /inference="COORDINATES: protein motif:HMM:NF015871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HSV25382.1"
                     /translation="MFLTAALAAASLAGAASLAAQSAPVAGSTANTKVGVLNVRQAIV
                     ATAEGKQASSELQGQFASRQTELENMNKQINDIRQRLQANEGKLSPEEGQRLQRQGEA
                     LAKQLQRKQEDYQEDVNASQQEVIDRIGRKMMDVLDRYARENAYTAIFDSSAQGAPIY
                     VSNGVDVTPEIVKLYDQAYPAKASATAAKPAATKPAATTPAPKP"
     gene            complement(1462..>2385)
                     /locus_tag="VLJ17_20445"
     CDS             complement(1462..>2385)
                     /locus_tag="VLJ17_20445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25383.1"
                     /translation="VVTNSGCNNVSVVDINPGSATFGQPVGNPIDTGTGPQGIAVSPR
                     FGLAVVANNTSGTASILDLATRTQKVGAVTVGTTPTGVAVNEGTGAALVANTGSNTIS
                     EINLALLFPTSGTAPTSLSATTISVDTSPIAIAIDPDRGTNSRGLAVVTALRLISGSS
                     PIGVLDAIDIGGATPAKSTTASTGSVSAAPTGIVFDPSVSPALFYANSSGANTVTSYN
                     PDTGGTSSVRVGINPTSLAINPQTGGIMTINSTSQTVSIVDTLSNPFKTRRTFGLGGS
                     AQFGIAIDQFTNMAVIADQAHNRLLIFPMPN"
BASE COUNT          511 a          681 c          697 g          496 t
ORIGIN      
        1 gccgaacgcc cggcgaagcg ttcatagtcc gcttgtttgc gcagagcgcg gtccatgccc
       61 ggagaactga tctccagcac ataacccgga cccgggatca gctcctcgac atcgagtatc
      121 acactcagtt gctgactgac acgttcgcag tcagcgtgag aaatcttcgg ataagggtcc
      181 ggttgaccgt ttatgaccgc cgtagaggcc ggaagtcggt cgatgtacac cctcaggaag
      241 cgctgtttgc cgattttcca ttcgacgtca acgacttcca gcccttccga ccgggcaacc
      301 cgctcggcgg cttcacgaat tttttccaac tgcaagcaga gactccacgg ccaatgccgg
      361 cgaaacgccc acttaccacc ggcagacaca aaaaagcggg cttgcgccca ctcgatcgtg
      421 cgacccgtaa cggacgaaat caaagtatat gcccaggtta cggcaaaagc aaggtacggg
      481 aaaaaacgag ggcgcctgct tcgcgcccct cagtaatacc ctgattcaaa aagatttacg
      541 gcttgggcgc gggggtcgtg gcggccggct tggtggcagc gggcttggcc gcagtggccg
      601 acgccttggc cggataagcc tggtcataga gcttgacgat ttccggggtc acatccacgc
      661 catttgaaac gtagatcgga gcgccttgcg cggaagaatc gaagatcgca gtgtaggcgt
      721 tctcgcgggc atagcgatcg agcacgtcca tcattttgcg accaatgcgg tcaatcactt
      781 cctgctgtga ggcgttcacg tcttcctgat agtcttcctg cttgcgttgc aattgcttgg
      841 caagcgcttc gccttgccgc tgcagccgct gcccttcctc cgggctgagt ttgccttcgt
      901 tggcctgcaa gcgctgacgg atgtcgttaa tctgcttgtt catgttctcg agctcagtct
      961 gacgcgacgc gaattgacct tgcagctccg acgaggcttg cttgccttcg gctgtcgcca
     1021 cgatcgcctg acgcacgttc aagactccaa ctttcgtgtt agccgtcgaa ccggccacag
     1081 gcgccgactg ggcggcgaga gaagccgcac cagcgaggct cgctgcggcg agagcggccg
     1141 ttagaaacat cttattcaca atggtctcct tattgaagga agcgctaagc gcttccctta
     1201 cgccaaccta gattggccga aaattttctg cctcaggact tgctaaacca accctgaacc
     1261 ttttgctgaa acccggtttc gccgcgctct gcgggaatcg cgggccccgt acaaaccaaa
     1321 aagtatagcc gaggcaaacc ctcccgagca acggcaaagc gcatggctgt gatcaggcgg
     1381 agcaggaaag tcctgtcaca tgcgatgcgc tgaaagccca gccaagttgt accccaattc
     1441 gctaatccag ccgaaccggc gtcagttggg catcgggaaa atcaacaaac ggttgtgcgc
     1501 ttggtcagca atgaccgcca tgttcgtgaa ctggtcgatg gcaatgccaa actgcgccga
     1561 cccgcctaga ccaaaagtgc gacgcgtctt aaacggattc gaaagagtat ccacaatgga
     1621 aacggtctga cttgtggagt tgatggtcat gatgccgcca gtttgcggat tgatggccag
     1681 cgaagtggga ttgatgccta ctcttacaga cgaagtgcca ccggtatccg gattgtatga
     1741 cgtaacggta ttggcaccgc tcgaattggc gtagaacagt gctggagaaa ccgacggatc
     1801 gaagacgatt cccgtgggtg cggcgctgac cgatccggtg ctggcggtgg tgctcttcgc
     1861 aggcgtagcg ccaccaatat cgatggcgtc gagaacaccg atcggcgatg aaccgctgat
     1921 cagtcgcagt gcggtgacta cagccagtcc cctgctgttc gtgccgcggt cgggatcaat
     1981 agcaatcgca attggggaag tatcgacgga aatcgtggtc gcgctgagac ttgtcggcgc
     2041 ggtgcccgaa gtcggaaaca gcagcgccag gttgatttca gaaatggtgt tgctgcccgt
     2101 attggcaacg agagcggccc cggttccttc attgacggca actccggtcg gagtcgtgcc
     2161 aacggtcact gcgccgacct tttgcgtacg ggtagcgagg tcgaggatag aggcagttcc
     2221 gctagtatta tttgcaacga cggccaagcc gaaacgcggg ctaaccgcga taccttgtgg
     2281 accggtgccg gtgtcgattg gatttccgac cggctgtccg aaagtggcac tgccggggtt
     2341 gatgtcgacg accgagacgt tgttgcaacc gctgttcgtc actac
//
LOCUS       DATILV010000845         2340 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_5060492, whole genome shotgun sequence.
ACCESSION   DATILV010000845 DATILV010000000
VERSION     DATILV010000845.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2340)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2340)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2340
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5060492"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..410)
                     /locus_tag="VLJ17_20450"
     CDS             complement(<1..410)
                     /locus_tag="VLJ17_20450"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HSV25384.1"
                     /translation="MLRLTGKSIIGFSRGASDTGAFHGVNPSSGEELEPTYYSATGKE
                     VEAAAQLASSAFEIYGRTRGKDKGLFLRKVVESIEGLGEMLVARASQETGLPPARIKT
                     ETARTCFQLRLFAELVEEGSWVDARIDRADPNRTP"
     gene            complement(518..2239)
                     /gene="araD"
                     /locus_tag="VLJ17_20455"
     CDS             complement(518..2239)
                     /gene="araD"
                     /locus_tag="VLJ17_20455"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinonate dehydratase"
                     /protein_id="HSV25385.1"
                     /translation="MKKSPDQLRSHRWFAGDSVRSFGHRSRAKQMGYAAEDFAGKPVI
                     GIINTWSDLTNCHSHFRTRAEEVKRGVWQTGGFPVELPAMPVNETFMKPSPMMYRNFL
                     AMETEELLRSQPIDGVVLMGGCDKTTPGLLMGAISMNLPAIYLPAGPMLRGNWNGQVL
                     GSGSDVWKYWAEKRAGRISDCEWSEMEDGIARSPGHCMTMGTASTMTSVAETLGLTLP
                     GASSIPAVDANHSRMATSCGRRIVEMVWEDLKPSDILSEASFANAITADMAIGGSTNA
                     IIHLVALAGRAGINLNLKKFDEISQRTPMIANLRPSGEYLMEDFYYAGGLRALLKEIG
                     SLLDLDCLTVSGETLGANIQSARLGNTEVIRALDNPVSSKGGTAILYGNLAPSGAVIK
                     PTAAEPRLLKHCGPAVVFQDYADMVKRIDTVDLAVDENSVLVLQNAGPLGGPGMPEWG
                     MLPIPKKLLTKGVRDMVRISDARMSGTAYGACVLHVSPESFIGGPLALVHDGDLIGLD
                     VAARKLELRVGDDELSRRRSEWKPLPPRYERGFGALYAAHVTQADQGCDFDFLHAGAE
                     TREPEIH"
BASE COUNT          499 a          714 c          617 g          510 t
ORIGIN      
        1 ggtgtgcgat ttggatccgc gcgatcgatg cgcgcatcaa cccaggatcc ttcttcgacc
       61 agctcggcga acagccgcag ttggaagcaa gtacgcgccg tctctgtctt gatgcgagca
      121 gggggaagac cggtttcctg ggacgcgcgc gcgaccagca tctcaccaag gccctcgatg
      181 ctttcgacga ccttccgcag gaagaggccc ttatctttgc cgcgggtgcg gccatagatt
      241 tcaaaggcgc tactggcgag ttgcgctgcc gcctcgactt ctttaccagt cgcggagtaa
      301 tacgtgggct caagctcttc accacttgac ggattaacgc catggaaggc gccggtgtcg
      361 gacgctccgc gtgaaaaacc aatgatcgat ttgcctgtta accgaagcat gctcagtcta
      421 atgtccgacc aactttagga aactctgaat aagtactctc gacgcgtagc gtcgaagact
      481 cttgctcaga gcgtccttta gtttgtcgga catccaatca atgaatctcc ggctcgcgcg
      541 tctctgctcc cgcatgcaga aaatcaaagt cgcaaccctg gtccgcttgt gtcacatgcg
      601 cggcatacaa agctccaaag ccgcgttcgt agcgcggcgg caaaggcttc cattccgatc
      661 gacgccggga cagctcgtca tcgccgactc gcagttcaag tttccgagca gctacatcca
      721 ggccaatcaa gtcgccatcg tgcaccagcg ccagcgggcc gccaatgaat gactcgggcg
      781 aaacatgtag tacacacgca ccatacgcgg tgccactcat gcgcgcatcg gagatccgca
      841 ccatgtcgcg cacgcctttc gttagtaact ttttcggaat cggcaacatg ccccactctg
      901 gcattcccgg gccgcccaac ggcccggcgt tctgaagcac caaaacggaa ttttcatcga
      961 ccgctaagtc aaccgtatca atgcgcttaa ccatgtctgc gtagtcctgg aagacaactg
     1021 ccggcccgca atgtttcagc aggcgaggtt cggccgcggt gggcttgatg acggctccgc
     1081 tcggtgcgag gttaccgtaa agaattgccg taccgccttt cgacgaaacc gggttgtcca
     1141 gcgcgcgaat gacttcggtg ttaccgaggc gcgctgattg aatattcgcg cccaacgttt
     1201 cacccgatac agtcaaacaa tcaagatcga gtaatgagcc tatctctttg agcaatgctc
     1261 gcaaaccgcc ggcgtaataa aaatcctcca tcaggtattc gcccgatggt cgcaggtttg
     1321 caatcatggg tgtacgttgt gagatctcgt cgaacttttt cagattgagg tttatccccg
     1381 cgcgcccggc cagcgctacg aggtggatga tggcgttggt cgatccgccg atggccatgt
     1441 cggcagtgat cgcgtttgca aaagacgcct cactgaggat gtcgctcggc ttcagatctt
     1501 cccagaccat ctcgacaatg cggcgcccgc acgacgtggc catccgcgaa tgattggcat
     1561 cgaccgcggg gatcgatgaa gcccccggca gggtcaagcc cagcgtctcg gcgaccgaag
     1621 tcatcgtcga agccgtaccc atcgtcatac agtgtccggg cgaacgcgca attccgtctt
     1681 ccatctctga ccattcacaa tcgctgattc tcccggcgcg cttctcggcc cagtatttcc
     1741 aaacatcact gccactgccg agcacctgtc cgttccaatt gccgcgcagc atgggacccg
     1801 ctggcaaata aattgccggc aggttcatgc tgattgcgcc catcaataag ccgggcgtcg
     1861 tcttgtcaca accacccatc agcacgacgc cgtcgattgg ctggctgcgc agcaattcct
     1921 cagtttccat cgccaggaaa ttgcgataca tcatcgggct cggcttcatg aaagtttcgt
     1981 tgacgggcat cgccggcagc tcaacgggga aaccacccgt ctgccacacg cctcgtttca
     2041 cttcttcagc tcgggtgcgg aaatggctgt ggcagttggt gagatcgctc caggtattga
     2101 tgattccaat caccggcttg ccggcgaaat cttcagcggc ataacccatc tgcttggcgc
     2161 gcgagcggtg gccaaacgaa cgcacggaat cgccggcaaa ccagcgatga ctgcgcagtt
     2221 gatcaggaga ttttttcatc ttgatgtcca acacgcttca gtttgtcgtc gaccttcatt
     2281 caagttgcgg tcataaccca cgatatcgac aaaccaagtt tgtaggacgt ctcctctttt
//
LOCUS       DATILV010000846         5376 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3020564, whole genome shotgun sequence.
ACCESSION   DATILV010000846 DATILV010000000
VERSION     DATILV010000846.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5376)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5376)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5376
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3020564"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            15..173
                     /locus_tag="VLJ17_20460"
     CDS             15..173
                     /locus_tag="VLJ17_20460"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate binding protein"
                     /protein_id="HSV25386.1"
                     /translation="MYAGRILKGAKPEDLPVVFPQKWELIINLKTAKALNLSVPPWFI
                     ARANETIE"
     gene            849..1016
                     /locus_tag="VLJ17_20465"
     CDS             849..1016
                     /locus_tag="VLJ17_20465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25387.1"
                     /translation="MGLIGPSKTERAPPPISADPFYYNRRFLLAELAARYAMDFPLSI
                     RGATMLSRAAS"
     gene            complement(1221..2459)
                     /locus_tag="VLJ17_20470"
     CDS             complement(1221..2459)
                     /locus_tag="VLJ17_20470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013913145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HSV25388.1"
                     /translation="MSQRGPGTGVFTLRHAGCQVRLGPVAFWTVVGTLVVMAGWSVVT
                     ATYFAFQDDVLTRMAARQAAMQYAYEDRLAEMRARIDRVTSRQLLDQEQLEQKLDQVV
                     RRQSVLEQRATTIGNIADPATTGSARGSRNAAPPSAGGVKASPIAGPHLFAPPSMREA
                     RLDVGRQSNPTLTARPRVGNEQALLARLTESLDQIEGRQTNTLAAMEASYDAKGRSMR
                     AVLAAVGIDPNKAVGAGVGGPFVPYRIAANAGSFEKQAYRINVARAQVERLSATIGMV
                     PLRKPVDGDIDTSSGFGVRLDPFVNRAAVHTGLDFRGDTGEPIRVTASGTVVSAGWNG
                     GYGRMVEVDHGNGLSTRYGHLSEIDVKVGQTLKAGQPLGRLGSTGRSTGPHLHYETRL
                     DGEAVDPQKFLQVGARFGAM"
     gene            complement(2797..3267)
                     /locus_tag="VLJ17_20475"
     CDS             complement(2797..3267)
                     /locus_tag="VLJ17_20475"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HSV25389.1"
                     /translation="MAADLTVGAKAPDFRLARDGGGTLSLADFKGKKLVLYFYPKADT
                     PGCTIEAKDFSRLQPAFVEAGVGLVGVSADPVKKQDAFKAKHALATPLASDESHEMLK
                     AYGVWAEKSMYGRKYMGINRVTVLIGGDGRIVRIWPKVKIEGHAEEVLAAAKAI"
     gene            3627..>5376
                     /locus_tag="VLJ17_20480"
     CDS             3627..>5376
                     /locus_tag="VLJ17_20480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25390.1"
                     /translation="MHRRAEARAVVRGVGRGSAAATRLEADSTVSARRSNSTDNSSWS
                     QITKLFAGLISWTTRSRRMRWFGIGVAAVTAIFVLVAGGLWLLLASGPISFDIATPWL
                     AAAVGENFGNQFRVDIGGTVLERDEHGRTAMRIRSITVRDHDGAVVASAPKAEVGFST
                     RSLLNGRLRAERLNLVGAELAIRVEADGKITVSTGADQRPLATAPALSAGEPRSLAAV
                     SANNDNAAESSRSLQEGFAAFLAWVDSLGAFGLDGGDLTEVGLKSGNLVVDDRRNGRH
                     SRFENIHLSVTRPRAGALDFELGSEDATRPWLLIASIKPDSDGVRKVDLEARKLLIKD
                     VLLAMRVDGGQIETDAQISAMLRAEFAQDGTPQFASGRILVGPGSFVDVGDPEAMITI
                     DRAEMQLDWNAARRILAVPFQVVSGATRINFMAQAEAPPDFNGSWGVNLSSSSVVLAP
                     TSPNEEPLTLNRILVRSRIDPVARRLNIDQAEVAGKGVGVAMSGNLDYSGSDPRLNIG
                     MAARKLPLAAFKQMWPAFVTPAVRNWIIERVSGGVIEQGEIAANAPISTLRSGGPPVP
                     DDGLSIQIHASGAVVRP"
BASE COUNT         1021 a         1652 c         1680 g         1023 t
ORIGIN      
        1 atcggcagat cggcatttac gctggccgca tcctcaaggg tgccaagccg gaggaccttc
       61 cggttgtgtt tccgcagaaa tgggagctga tcattaatct caagaccgcg aaagcgctta
      121 acctctcggt tccgccctgg ttcattgccc gcgccaacga aacgatcgaa tgaaatagcg
      181 gcgccgaaca cgctccgaaa ctttgcaagt aggaagcagt ccggccatct attgacggcc
      241 cacctcaggc gaccaggcat cgggttcaag tggatcgaaa acttgttcgc gcagggcttg
      301 atcttattgc ggaatgacaa cctcgacgaa gtccgtgact tccgttcgac ggttcccgaa
      361 gtcgaccatg atgtcttgca gggctgaagg ctcgcggacc agcgggagag taccgttggg
      421 cagaaggtga cgagagccgg ctgaaggcaa tggcaagcga cttggtgagc cgccgtgcgg
      481 ctctcatcgc cccaaccggc ggcattcgat ccgcagagat ggcaagggaa gcgcgactcg
      541 cacgatccct gttctcttca tatcaaggag caatcccgtg gagcgggggc tcgtggacag
      601 catcaatcgg ccgggcggca acgccacggg cgtaagttcg gataccaccg aaatggtgcc
      661 aaagcgccca gagctgctgc gggaattgct gtccgcgagt acaacgactg ccatactcgt
      721 gagtcccggc accatcacgc gccgtaaggg atcgacagtc ccggaaagcg agacaagatt
      781 tgccaaagag aacggcctgc tcgccattcg ggttcacaat acgccggatt tcgacaagga
      841 agtaagcgat gggtttgatt gggccgtcaa aaacggagcg cgcgcccccc cctatttctg
      901 ccgatccgtt ctattacaat cgacgttttc ttcttgccga gcttgcagcg cgctacgcta
      961 tggacttccc actgtctatc cgcggcgcga ctatgctgtc gcgggcggcc tcctgagtta
     1021 tgcgcccagt tttcaggaca cgtatcggca gatcggcctt tatgccggcc ggatcctcaa
     1081 gggagctaag ccgggggatc ttccggttgt gtttccgcag aaattggaac tgatcgtcaa
     1141 ccttaagacc gccaaagcgc tcaacctcgc aattccggtc cggccatgtc ctgcccatcc
     1201 gtaccggggc gggcggcccc tcacatcgcc ccaaacctcg cccccacctg gaggaacttc
     1261 tgcgggtcga cggcctcgcc gtcgagccgg gtttcgtagt gcaggtgcgg tccggtcgag
     1321 cgaccggtcg agccgaggcg gccaaggggc tgcccagcct tgagggtctg gccgactttg
     1381 acgtcgatct ccgagagatg gccgtagcgg gttgataggc cgttgccgtg gtcgacttcg
     1441 accatgcggc catagccgcc gttccagccg gccgacacca cggtgccgct ggcggtgacg
     1501 cggatcggct cgccggtgtc gccgcggaaa tcgaggccgg tatgcaccgc cgcacggttc
     1561 acgaacgggt cgaggcgcac gccaaatccc gaagaggtat cgatgtcgcc gtcgaccggc
     1621 ttgcgcagtg gcaccatccc gatcgttgcc gacaggcgct cgacctgggc gcgggccacg
     1681 ttgatgcgat aagcctgctt ttcgaacgaa cctgcattcg ccgcaatgcg ataaggaaca
     1741 aatggccccc cgacgcctgc accgacggcc ttgttggggt cgatccccac cgcggcgagc
     1801 accgcgcgca tgctgcgccc tttggcgtcg tagcttgcct ccatggcggc aagcgtattt
     1861 gtctggcggc cctcgatctg gtcgagtgat tccgtcagcc gggccagcaa cgcctgttca
     1921 ttgccaaccc gaggtcgcgc tgtgagcgtc ggattcgact gccggcctac atcgagtctt
     1981 gcctcgcgca tcgatggtgg agcgaacaga tgaggtccag cgatcggcga tgccttgacg
     2041 cctccggcac tcggtggcgc agcgttgcgc gatccgcgag ccgagccagt cgtggccgga
     2101 tcggcaatgt tgccgatcgt agtggcgcgc tgctcgagga ccgattgccg ccgcacgact
     2161 tggtcgagct tttgctcaag ctgttcctgg tcaaggagct gccggctggt cacgcggtca
     2221 atgcgggcgc gcatctcggc aaggcgatcc tcgtaagcgt attgcatagc agcctggcgc
     2281 gccgccatgc gggtaagcac gtcgtcttga aacgcgaaat aggtggcggt caccaccgac
     2341 cagccagcca taacaacgag cgtcccgacc accgtccaga aagccaccgg cccgagacgg
     2401 acctgacagc cagcgtgccg cagcgtaaag acaccggtgc cgggacccct ttggctcact
     2461 tggcgcgtcc gtgcaccatc gttgcgcgca cgggcccccg agccgtggtg gccatggcag
     2521 ataccgtttg gcgcgggatg acgattgtga ctccgggaat aatcctgatc aggatcggaa
     2581 atgggataaa tggggcgcgg cggcatgcag acttcccatg ccagcccaac ccaaccttac
     2641 caagtcgcgt tcgggaccag ctttgcggag cgaatggaag cagcgaatgg ttaatttttg
     2701 ggaaatggtg gccgaaccgt tacctaattg cgtaaaaaat gcgtcgtgtc gttaacgttt
     2761 tcttgtcgct ttcgtatcgg cgccccgaaa aacggctcaa atcgcctttg cggctgccaa
     2821 aacctcctcg gcgtgaccct cgatcttgac cttgggccag atgcgaacga tgcgcccgtc
     2881 gcccccgatc aacaccgtca cgcgattgat tcccatgtat tttctcccat acatggactt
     2941 ctcggcccaa accccatagg ccttgagcat ttcgtgactt tcatcggagg cgagcggtgt
     3001 cgccagcgcg tgcttagcct tgaacgcatc ctgcttcttg acggggtctg ccgagacacc
     3061 aacaagccca actccggcct cgacaaaggc tggctgcaga cgggaaaagt ctttggcttc
     3121 aatggtacag ccgggggtat cggccttggg atagaagtat agaacgagct ttttcccctt
     3181 gaaatctgcc agcgacaggg taccgccgcc gtctcgcgcc aagcggaaat ccggcgcctt
     3241 ggcgcccacg gtgagatctg ccgccatctg ccttcgcctt cctttcgtcg ctttcgaacc
     3301 gtctgttgag atataatgat gttcggcgtc ggccaagggc agagtcgtta accaaatcgg
     3361 ccccgcctag ccgcggtaaa tcacttgagt ttgccgccgc ctcgcttaca ggaagcatcc
     3421 gtgacgggag attgatcgca aaaatcgagt tgcgggatcg gtctggtggg cgaaaatagt
     3481 tgtttcgacc gcgctccggg tgttgtcgcg gggcgtgaga cgctaacgtc gcccacggca
     3541 gagaggggac attccaccaa gcaatggcgg ctgaacagga cagatccagg accgcaggct
     3601 tgcgcactgt ggaaggaggg cttcaggtgc accgccgcgc tgaggcgcgc gcggttgtgc
     3661 gcggcgtggg acgcggttcg gctgcggcga cgcggcttga agcggattcg acggtgtcgg
     3721 ctcggcggtc caacagcact gacaactcgt cttggtcgca aatcacgaaa cttttcgccg
     3781 ggttgatatc ctggacgacg cggtcgcgac ggatgcgctg gttcggtatc ggcgtggcgg
     3841 cggtcacagc gatattcgtg ttggtggccg gcggattatg gctcctgctg gcaagcgggc
     3901 cgatatcgtt tgacatcgcc acgccgtggc tggcggctgc ggtgggagaa aacttcggca
     3961 atcagttccg cgtcgacatc ggcggcaccg tgttagaacg tgacgagcac gggcgcaccg
     4021 cgatgcgcat ccgttccatt acggtacgcg accacgacgg cgcggtggtc gcgagtgccc
     4081 ccaaggccga ggttgggttc tccactagga gcctgctcaa cggccggctg cgggccgaac
     4141 gcctcaacct cgtcggcgcc gagcttgcga tccgggtcga agccgacggc aagattacgg
     4201 tgtcgaccgg cgccgaccaa aggccccttg ccaccgcgcc agcgttaagt gcgggcgagc
     4261 cacgttcatt ggctgcagtg tccgccaata acgacaatgc agccgagtca agccgcagtc
     4321 tgcaggaggg tttcgccgcc tttctcgcct gggtcgacag cctcggcgcg ttcggtctgg
     4381 acggcggcga cttgactgaa gtcggactca agagcggaaa cctcgtggtc gatgaccgac
     4441 gtaacggcag gcattcgcgg ttcgaaaata tccatttaag cgtcacccgt ccgcgcgccg
     4501 gggcgctcga tttcgagctg ggttcggagg acgcgacccg tccgtggctc ctgatcgcgt
     4561 cgatcaagcc cgacagtgac ggtgtccgca aggtcgatct ggaggcgcgc aagcttttga
     4621 tcaaggacgt cctgttggcc atgcgcgtcg acggcggaca gatcgaaacc gatgcccaaa
     4681 tatcggcgat gcttcgcgcc gaatttgctc aggatggcac gccgcaattt gcctccggcc
     4741 gtatcctggt gggaccaggc tcgttcgtcg acgtcggcga tccggaagcc atgatcacga
     4801 tcgaccgtgc cgaaatgcag ctcgattgga acgccgcccg acggatactg gcggtgccct
     4861 tccaggtcgt ttccggcgcc acccgcataa acttcatggc gcaggccgag gcaccacctg
     4921 acttcaacgg aagctgggga gtcaatttga gcagcagctc ggtcgttctg gcgccgacca
     4981 gccccaatga agagccgctc accctcaacc gcatcctggt gcgcagccga atcgacccgg
     5041 tggcgcggcg actcaacatc gatcaggcag aagtggccgg caagggcgtc ggtgtcgcta
     5101 tgtcaggcaa tctcgattat tccggatctg acccgcgact gaatatcggc atggcagcgc
     5161 gcaagcttcc gcttgcggca ttcaagcaga tgtggccagc cttcgttacg ccggcagtcc
     5221 gcaactggat aatcgaacgg gtttccggtg gagtgatcga gcagggcgaa attgctgcca
     5281 acgcaccaat ctcgaccttg cgttccggcg gtccgccggt gccggacgac gggttgtcga
     5341 tccagatcca cgcctccggc gcagtcgtgc ggccgt
//
LOCUS       DATILV010000847         7178 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_979816, whole genome shotgun sequence.
ACCESSION   DATILV010000847 DATILV010000000
VERSION     DATILV010000847.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7178
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_979816"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..335)
                     /locus_tag="VLJ17_20485"
     CDS             complement(<1..335)
                     /locus_tag="VLJ17_20485"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HSV25391.1"
                     /translation="MNLKAVSLTAIAVAAISAPAVAHHSFAMFDAEKTVTMQGTVKEF
                     EWVNPHSWLRIMVNDERIGKPVLWAIELSSPGRLVTMGMRADSVKPGDAVSVTIHPMK
                     DGTRGGQFI"
     gene            668..1228
                     /locus_tag="VLJ17_20490"
     CDS             668..1228
                     /locus_tag="VLJ17_20490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25392.1"
                     /translation="MRVTALATLVGAALATTTGPALAVWHGYISHPLGFAFAAPGELK
                     VEKGTYRGAVAGTRDTLVYRFVDDNIEYKAVVIDLTDNANDAATLLGEAEYNFQDGKK
                     LLMDTFGRLDRQYGRKLTIDLPNNGGRTTAGFYFINGRIVSLQATVLPANGDYESPEM
                     ARFVDSITFFTVRAPDDAIELPVPPK"
     gene            1247..1822
                     /locus_tag="VLJ17_20495"
     CDS             1247..1822
                     /locus_tag="VLJ17_20495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25393.1"
                     /translation="MHTRVLSTLAGVALTLAVMPAQADWRSYVNRELGFSFMAPGEIK
                     AAVGTFRGAIAGPRQTIIYRSVEDNIEYKVTVTSFVQAAAEGATILGERQYMFQDGKK
                     VLLDTFARVESGKDTVYGRKLVVDLPDNKGRATGVFYFTKGRLIALEATVLPTHGNFA
                     SPDPSRFVDSIAFALSRTESGAVEIKTPALE"
     gene            1912..2670
                     /locus_tag="VLJ17_20500"
     CDS             1912..2670
                     /locus_tag="VLJ17_20500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HSV25394.1"
                     /translation="MWDLLTSLDAWAALVSLAALEIVLGIDNVVFISILVVRLDAQRS
                     EAARRLGLGLALIFRIALLFALTSLLGLSATVFTLWDNSYSWHELILIFGGLFLIAKA
                     THEMHAQIEGQKEETRGASSASTGAQPSRASMALVIGQIIVVDVVFSIDSIVTAIGMA
                     QDIRIMIAAVLIAVAVMYAASGPVAGFVAAHPTTKTLALAFLLLIGVALVADGFDVHI
                     PRGYIYFAMAFAGAVETFNILATPNRRSHPKPDL"
     gene            3011..3988
                     /locus_tag="VLJ17_20505"
     CDS             3011..3988
                     /locus_tag="VLJ17_20505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007590887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone oxidoreductase"
                     /protein_id="HSV25395.1"
                     /translation="MVAAVRVHKHGGPEVLTYEDIDIPAPGPGQVRLKQHAAGVNFID
                     TYFRVGMYPSPVGLPFVSGNEGAGEVVALGAGVTDLKVGDRVGYVAPLGAYAAERNLP
                     ADRAVKLPEAVNYEQAAATMLKGMTVCYLLRRTFDVQKGTTVLIHAAAGGVGLIACQW
                     ANALGATVIGTVGTKDKAELAKANGCHHTILYRDEDFVARVKDITKGALCDVVYDGVG
                     KTTFPASLDCLHPLGMFVSFGSASGPIDAFNINLLQTKGSLFATRPTLNHYAAKREDL
                     LKLAAETFDVISSGKVKIPVNQKYPLKDAQKAHRDLESRGTTGASILLP"
     gene            4004..4693
                     /locus_tag="VLJ17_20510"
     CDS             4004..4693
                     /locus_tag="VLJ17_20510"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HSV25396.1"
                     /translation="MKSWGIGATLGFAILAFGFGQAVGFGALSAAMGADPSLTGYDGS
                     AVAISLLVGNPIQVVTLALAAQMTGEDLLAYFALDLPRWRDVAVAVAGLAVVILVGDA
                     LTLALGRDLVPSFQLQIHRSAQAEGALISLWLALIVVAPVGEELLFRGFLFRGFVREP
                     REALPGILAIALIWSLLHIQYDWFGASLVFTIGVLFGYVRLYSGSTTLVILLHMLLNL
                     ESVVETVFMLG"
     gene            complement(4914..5591)
                     /gene="bioD"
                     /locus_tag="VLJ17_20515"
     CDS             complement(4914..5591)
                     /gene="bioD"
                     /locus_tag="VLJ17_20515"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012383820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004141 - dethiobiotin synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HSV25397.1"
                     /translation="MTAMFVTATGTDIGKTFVTRGLIKQLRARGRTVEALKPIVTGFD
                     PHTAHITDTGRLLAALGRALTPKQIAQISPFRLRAPVSPDLAARLEGTSIDFKALNAF
                     CRNAISRHKDALLIEGIGGIMVPLDERHTVLDWLIEIDLPAILVAGSYVGTLSHTLSA
                     LDVLDRNELKVAAVVVSETPGSAATLADTVDTIRRFATNIEVFALPRLPEAMFDHPVM
                     AAIADLM"
     gene            complement(5588..6748)
                     /gene="bioF"
                     /locus_tag="VLJ17_20520"
     CDS             complement(5588..6748)
                     /gene="bioF"
                     /locus_tag="VLJ17_20520"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041535761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008710 - 8-amino-7-oxononanoate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HSV25398.1"
                     /translation="MSSLDDFVQTKLAALESQHLRRTLVTSARHDGVMVERGGRQLIS
                     FSCNDYLGLSSHPALIEAARNATEKFGVGAGASRLVTGNHPLYDELEARLALFKGTSA
                     ACVFGSGYLANTGIVPALVGGGDLVAIDELSHACLFAGARLSGAKVVPFPHNDIARLR
                     MLLAENRAGHAKAMILTEGVFSMDGDLAPLVELGRLAGDYDAWLMADDAHGIGVVGNG
                     RGSTLARDAPAEVPLQMGTLSKAVGVYGGYLCASAPVIAFIKNRARTLVYSTGLPPAI
                     VAAAIAALGLIASDPSLSAQPLRKAKAFTIRAGLPEAVSAIVPVIIGAPEDTLAAAHM
                     LEAEGFLAVPIRPPTVPAGTARLRLAFTSRHEDADIERLADLIRTRILKDRP"
     gene            6933..>7178
                     /locus_tag="VLJ17_20525"
     CDS             6933..>7178
                     /locus_tag="VLJ17_20525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012383822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25399.1"
                     /translation="MLETRCQMPAKSPEIIADSRPGWFEAGIPHIWLPYAQMKIAGDP
                     LPVVATRGSRIMLADGRELIDGIASWWTACHGYNHPHI"
BASE COUNT         1315 a         2140 c         2293 g         1430 t
ORIGIN      
        1 tggatgaact gcccgccccg ggtgccatcc ttcatcggat gaatagtcac cgagaccgcg
       61 tcgcccggct tcacggaatc ggcgcgcata cccatggtga ccagccgtcc cggtgagctt
      121 agctcaatcg cccatagcac cggcttgccg atcctctcgt cattgaccat gatgcgcagc
      181 caggagtgcg gattgaccca ttcgaattcc tttacggtgc cttgcatggt gacggtcttt
      241 tcggcatcga acatggcgaa ggaatgatgg gcaacggcgg gcgccgaaat cgcggcgacc
      301 gcgatggcag tcaggctgac ggctttcaag ttcatgggcg tctcctcaaa tgatttggcc
      361 ggttagttat gtatttggca ttgtagcaca tcacgacagc ataatgaaac agttcaacaa
      421 atctgtggaa gcaacattag agcgttcggt caaatcgaac catgttattc ggcgtcatgg
      481 ccgggcctgt cccggccttg tccccggcca tccacgactt gcttgcgggg ggctcggcaa
      541 gaaagacgtg gataccgcga caagtgccgg catgacgagg ggtggttcga tcacatggaa
      601 aggtgttcta aactcaacgc ggtgatagat cgcgcctata agggcaggca attcacggga
      661 ggcatggatg cgtgtgacgg ccttggcgac tttggtgggc gccgcgctgg cgacaacgac
      721 cggcccggcg ctggcagttt ggcatggcta catcagccat cctctgggct ttgcgtttgc
      781 ggcgccgggc gagctcaagg tggagaaggg aacctatcgc ggcgccgtgg ccggcacgcg
      841 cgacactttg gtgtaccgct ttgtcgatga caacatcgaa tataaggcgg tggtcatcga
      901 tctgacggac aacgccaacg acgccgcgac gctgctgggc gaggccgaat acaacttcca
      961 ggacggcaag aagttgctga tggatacgtt tggccgtctg gatcgccaat acggacgcaa
     1021 actcacgatc gatttgccca acaacggcgg acgcacaaca gccgggtttt atttcatcaa
     1081 tggccgcatc gtttcgctcc aagcgacggt gctgccggcc aatggcgatt acgaatcgcc
     1141 ggagatggcg cggttcgttg actcgatcac tttctttacg gtccgcgcgc ccgacgatgc
     1201 gatcgagctt ccggtgccgc cgaagtagtt caagggagga caaaaaatgc acactcgggt
     1261 gttgagtacc ttagcggggg tggcgcttac gttggcggtg atgccggcgc aggccgactg
     1321 gaggagttac gttaaccggg aacttggttt ctccttcatg gcgccgggcg aaatcaaagc
     1381 tgccgtgggc acgttccggg gcgctatcgc gggaccgcgt caaacgatca tttacaggtc
     1441 ggtggaggac aacatcgaat acaaggtgac ggtgacgagt ttcgtacagg ccgcggccga
     1501 gggcgccacc attttgggcg agcggcaata catgttccag gatggcaaaa aggtgctgct
     1561 ggacaccttc gctcgcgtcg agtcgggcaa ggacacggtc tacgggcgta aacttgtggt
     1621 cgatcttccc gacaacaagg gccgggcaac gggcgtgttc tatttcacca agggcaggct
     1681 catcgcgctc gaagcgaccg tgcttcccac ccatggcaat ttcgcctcgc ccgacccgag
     1741 ccgcttcgta gattccatcg cgttcgcgct ttcccgcacc gaatcgggtg cggtcgaaat
     1801 caagacccct gcgctggaat agggttgcgt tctccgattt gtctgcgtga tacacccgtg
     1861 actttgtgcg ttgcggaatc gccgttggcg gggaactgaa gctgctgggc gatgtgggac
     1921 cttctgacga gccttgatgc ctgggctgca cttgtgagcc ttgctgcgct tgagatcgtg
     1981 cttggcatcg acaatgtggt gttcatttcg atcctggttg ttcgccttga cgcacagcgt
     2041 agcgaagccg cgcgtcgcct cggtctcggg ctcgcgctca tattcaggat agcgctgctg
     2101 ttcgcactca cctcgctgct cgggctttcc gccaccgtat tcaccctgtg ggataactca
     2161 tattcctggc acgagctcat tcttatcttc ggtggcttgt tcttgatcgc caaggcgacc
     2221 catgagatgc acgcccagat cgagggacaa aaggaggaaa cgagaggggc gagcagtgcg
     2281 agtaccggtg cgcagccgtc tcgcgcctct atggcactag tgatcggcca gatcattgtg
     2341 gtcgacgtgg tgttttcgat cgattcgatt gtcaccgcca tcggtatggc acaggacatc
     2401 cgcatcatga ttgcggctgt gctgattgcg gtcgccgtca tgtacgcggc ctcggggccg
     2461 gttgcgggct tcgtcgcagc tcacccgacc accaaaacgc tggcgctggc attcctgctg
     2521 ctgatcggtg tcgctttggt ggctgatggc ttcgacgtcc atattccgcg cggctacatc
     2581 tacttcgcca tggcgttcgc gggcgctgtc gagacgttca atatcttggc gacaccgaat
     2641 cggcgctcgc atccgaaacc ggacctgtag tgacttccgt ttaccgcccc gacctgaccc
     2701 cgacccgccc tgcaagcacg gcaatcccat ttgacacggc gcccctgctc cctttcccgg
     2761 ctagccatca gggcgtttac gcccctcctc gacgggctag ggagagggga tgggtgggga
     2821 ccacaagctc agactcgcgg agaatcccgc ccacccggat aacgcaagcg cgatacgact
     2881 tctcccgcaa gccggatagg tgaaggctgc ggcgaccaaa tacgattgcc ccagggcgct
     2941 tgcgtcttgc tcgcgactac ctatgatcgc cgccacccaa gcccaggatg atatgaagaa
     3001 ggagacgttc atggttgctg cagtgcgtgt gcacaaacac ggtggccccg aggtgctgac
     3061 ctatgaggat atcgatattc cggcgccggg gcccgggcag gtcaggctca agcagcatgc
     3121 tgccggcgtc aatttcatcg acacctattt ccgcgtgggc atgtatccgt cgccggtcgg
     3181 ccttccgttc gtgtccggca atgaaggcgc cggagaggtc gtcgcgctcg gtgctggcgt
     3241 gaccgatctc aaggtcggcg accgtgtcgg ctatgtggcg ccgcttgggg cctatgcggc
     3301 ggaacggaac ttgccggccg accgggccgt gaagcttccg gaggccgtca actatgagca
     3361 ggcagctgcc accatgctca aaggcatgac ggtctgctac ctgctgcgcc ggacattcga
     3421 cgtgcagaag ggcaccacgg tcctgatcca cgccgccgcc ggcggggtcg ggcttatcgc
     3481 gtgccaatgg gcgaacgcgc tgggcgctac cgtcattggc acggtcggta ccaaggacaa
     3541 ggcggaactc gccaaggcca acggctgcca tcatacgatc ctctatcggg acgaggattt
     3601 cgtcgcccgg gtcaaggaca tcaccaaagg ggcgttatgc gacgtggttt atgacggcgt
     3661 tggcaagacc acgtttccgg cctccctcga ttgcctgcat ccgctcggca tgttcgtgag
     3721 tttcggcagc gcgtccgggc caatcgatgc tttcaacatc aatctgctgc agaccaaggg
     3781 ctccctgttt gcaacgcggc cgacgctcaa ccactacgcc gccaagcgcg aggatctgct
     3841 gaagcttgcg gccgaaacct tcgatgtcat ctcaagcggc aaggtgaaga tcccagtcaa
     3901 ccagaagtat cccctgaagg atgcccagaa ggcgcaccgc gatctggaat cccgaggcac
     3961 tactggggcg tcgattctgt tgccctgaac gggcgtcttg cttatgaaaa gctggggtat
     4021 tggggcaacg ctgggttttg cgatcctggc gttcgggttc ggtcaggcgg ttggctttgg
     4081 cgcactgtcg gccgcaatgg gcgccgatcc gtcgctcacg ggatatgatg gctctgcggt
     4141 ggccatatcc ttgctggtcg gcaaccccat ccaagttgtc actttggcgc tcgccgcgca
     4201 gatgacgggc gaggacctgt tggcgtattt tgccctcgac ctgccgcgct ggcgcgacgt
     4261 agccgtcgcg gtggcggggc tggcggtcgt gatccttgtg ggcgatgcgc ttaccttggc
     4321 gctcgggcgc gacctcgtac cgtcgttcca gcttcaaatt caccgttcag cccaggcgga
     4381 gggggcactg atttccctgt ggctcgcctt gatcgtggtg gcgcccgtgg gcgaagagct
     4441 tttgttccgc ggcttcctgt tccgcggctt cgtacgcgag ccgcgcgagg cgttgcccgg
     4501 aatcctcgcc atcgcactga tctggtcgct gctgcatatt caatacgact ggttcggcgc
     4561 cagcctggta ttcacgatcg gggtactgtt cggctatgtg cgcctgtatt ccggctcaac
     4621 caccctcgtc attctgctcc acatgctgct caatcttgag agcgtggtgg agacggtgtt
     4681 catgctcgga taggcgtgac tgctttctcc ctttcctcat aagcagcgca atcgcatttg
     4741 gccaccctcc cctggagggc gaatgcagtc ggtggggtga cagcgacgca gcatatgttt
     4801 gagcgctgtc accccctccc ggcccgcgcg ctagcgcggg ccgacctccc cttcccaggg
     4861 ggaggtgttc gctactggcg cggcatatgc gattgcgctc cccacgaggg aattcacatc
     4921 agatccgcaa tcgccgccat gaccgggtga tcgaacattg cttccggcaa gcgcggcagc
     4981 gcaaatacct cgatgttggt ggcgaagcgg cggatcgtgt caacggtgtc ggcgagcgtt
     5041 gccgcactac ctggggtctc gctcaccacc acggccgcca ccttcagctc gttgcggtcg
     5101 agcacgtcga gggccgacag ggtatgactc agggtcccca cgtagctgcc cgcaacaagg
     5161 atcgccggca gatcgatttc gattaaccag tcgagtaccg tgtggcgctc atccagcgga
     5221 accataatgc cgccgatgcc ttcgatgagg agcgcatcct tgtggcggct gatggcgttg
     5281 cggcaaaagg cgttgagcgc cttgaaatcg atgctggtgc cctcgaggcg ggccgcaaga
     5341 tccggtgaca ccggtgcccg cagtcggaac ggagatattt gggcgatctg cttgggtgtc
     5401 agcgcgcgtc cgagcgctgc cagcaggcgg ccggtgtcgg ttatgtgggc ggtatgcggg
     5461 tcgaacccgg taacgatcgg cttaagtgcc tcgactgttc gtccccgggc gcgcaattgc
     5521 ttgatcagac cgcgcgtcac gaacgtcttg ccaatatcgg tgccggtggc agtcacgaac
     5581 atcgccgtca tggtcggtct ttcaatatgc gggtgcggat gagatcagcg agccgctcga
     5641 tatcggcatc ttcatgacgt gaggtgaatg cgagccgcaa tcgggcggtt ccggccggca
     5701 cggtgggggg gcgaatcggc accgccagaa agccttcggc ttcgagcatg tgggccgccg
     5761 ccagggtatc ctccggcgcg ccgatgatca ccgggacgat tgcgcttacg gcctccggta
     5821 gcccggcgcg gattgtaaac gctttggcct tgcgcagcgg ctgggccgaa agggagggat
     5881 cgctggctat gagaccgagt gctgcgatcg cggccgccac gatcgccggc ggcagcccgg
     5941 tcgagtacac caaggtacgg gcgcggttct tgatgaacgc gatgaccggg gcggaagcgc
     6001 agagatagcc gccatagaca ccgacggcct tcgacagcgt acccatctgc aacggcacct
     6061 cggccggggc gtcgcgcgcg agggtcgagc cgcggccatt gccaacgaca ccgatgccat
     6121 gggcgtcatc ggccatcagc caggcatcgt agtcgccggc gaggcggccc agttcgacca
     6181 gcggggcgag gtccccgtcc atggaaaaca cgccttcggt gaggatcatg gccttggcat
     6241 gaccggcccg gttctcggcg agtagcatcc gcaagcgggc aatatcgttg tgagggaagg
     6301 gcacgacttt cgcgccggat agccgcgctc cggcaaacag gcacgcatgg gagagctcat
     6361 cgatcgccac aaggtcgccg ccgccgacca gcgccggaac gatgccggtg ttggcaaggt
     6421 agccggagcc gaacacgcac gcggcggagg tgcccttgaa tagcgcaagc cgcgcttcca
     6481 gctcatcata gagcgggtga ttgccggtaa cgaggcgcga agcgccggcc ccgacgccga
     6541 acttttcggt cgcatttcgg gctgcctcaa taagcgccgg gtggctggac aggcccaaat
     6601 aatcgttgca ggaaaacgag atcaactgcc ggccaccgcg ctccaccatt acgccgtcgt
     6661 gacgcgctga ggtgacaagc gtgcggcgca agtgttggct ttcgagtgcg gccagcttgg
     6721 tttggacgaa gtcgtcgaga gaggacatag gcggagaggt tccaattcta acggtttgat
     6781 cctatctcac ggttttcacg ccccgcgaag cttgtccccg cgaaggtggg gagcgggtca
     6841 ctcagtagcg ggaggggagc agtttgcggc acagtcgagc cttaacttag cgcgcatgcg
     6901 cttgcgcggg cgatgaacta cggggaagcg gaatgttgga aacgcgctgc cagatgcccg
     6961 ccaaatcacc tgagatcata gccgacagcc ggccgggctg gttcgaagcc ggcatacccc
     7021 acatctggct gccttacgcg cagatgaaga tcgccggcga tccactgccc gtggtcgcga
     7081 cacggggcag ccgcatcatg cttgccgacg ggcgcgaact gatcgacggc attgcgtctt
     7141 ggtggaccgc atgccacggt tacaatcatc ctcatatc
//
LOCUS       DATILV010000848         6128 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1231428, whole genome shotgun sequence.
ACCESSION   DATILV010000848 DATILV010000000
VERSION     DATILV010000848.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6128
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1231428"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1952
                     /locus_tag="VLJ17_20530"
     CDS             <1..1952
                     /locus_tag="VLJ17_20530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011438943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PBP1A family penicillin-binding protein"
                     /protein_id="HSV25400.1"
                     /translation="RSRRTRRRSLVGRIVYWGTVASLWAVIAVIGAAVWVGAHLPPIQ
                     SLEVPKRPPSFQIVDMPGRPLAVRGDMGGAAVALKDLPRYVPQAFVAIEDRRFYSHHG
                     VDPIGVSRALVANLLRRGVAQGGSTITQQLAKNLFLTQERTLTRKLQEVVLALWLEHK
                     YSKAEIIELYLNRVYFGAGAYGVEAAAQRYFGKSARRVTLSEAALLAGLVKSPSRLAP
                     TKNYDGAERRGQLVLAAMSDAGFINKDAAQAAMALGPSIVRASGGGSSNYVADWVMDV
                     LNDLVGLVDEDIVVDTTIDVAFQAAAEKALLDQLAQKGQRFGVEQGALVSMTPDGAVR
                     ALVGGRNYAENQFNRAIAARRQPGSTFKPFVYLTALERGLTPESVRDDRPVELKGWRP
                     ENFNREYFGPVTLTQALANSLNSVSVRLTMEFGPTAVVRTAHRLGIASKLEVNPSIAL
                     GTSEVSVLELVSAYAPFSNGGLAVIPHVVERVRTTQGGKILYTRNQNTLGRVIDARYV
                     AMMNAMMRETVASGTARRADLPGWPVAGKTGTSQDFRDAWFVGYTSQLVTGVWLGNDD
                     NTPTKKITGGGLPVEVWSQFMRAAHRGKAPSDLPGGAVAAISPSNMGTPIPPAGVSGG
                     RGREATRPAEGSMDGWFLERLFSRR"
     gene            complement(1958..2803)
                     /locus_tag="VLJ17_20535"
     CDS             complement(1958..2803)
                     /locus_tag="VLJ17_20535"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HSV25401.1"
                     /translation="MTLRALLYRRPTEPQAIEVVCDGAVHLVRLRRHRQARRYTLRVV
                     AVTREAVLTMPPRGSFREAREFAEKHGAWIAARLDRLPRAAPFEHGIEIPLRGIVHAI
                     VHRRSERGTVWTKIDRDGRRLLYVAGHDAHVARRITDYLKREAKRDLEAAVARYADRL
                     GVKVRRISIRDQASRWGSCSTSGVLSFSWRLVLAPRYVLDYLAAHEVAHLQEMNHSAR
                     FWRLLGRMCPDMERAKAWLDAHGTDLHRYGIAYDGLGAAKPRRGALPCRSARQRVKRR
                     VCREN"
     gene            complement(3159..4520)
                     /gene="phaZ"
                     /locus_tag="VLJ17_20540"
     CDS             complement(3159..4520)
                     /gene="phaZ"
                     /locus_tag="VLJ17_20540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoate depolymerase"
                     /protein_id="HSV25402.1"
                     /translation="MAIGEFGGAPKLPGEGGLLMSAPMYWFYEVSQAALNPSRALADA
                     TKLLFKNPLNPLALTTFGKSIAAACEVFERSTRRYSRPEWGITNTLVGGERVPVNIET
                     PWQRPFCRLLHFTRVFEHAPQRPQPRLLIVAPLSGHYATLLRGTVEAFLPNHDVYITD
                     WADARMVPLIEGRFDLDDYIDYLISILHFLRGDVHVIAVCQPSVPVLAAVARMEAVED
                     PCVPHSMVLMGGPIDTRVNPTRVNALAESRGTEWFRRNVITKVPFPQPGVMRDVYPGF
                     LQLHGFVSMNLDRHIEAHRNLFHHLVQGDGDSAQKHREFYDEYLAVMDLAAEYYLQTV
                     ETVFVRHALPKGTMSHRGQPVDSSKIRRVALMTVEGEHDDISGVGQTEAAHRLLNNLP
                     DNLKAHWLQPGVGHYGVFNGSRFRAEIAPRIADFVLSHNSRHGGYNAVPARGAQAAYH
                     QAS"
     gene            complement(4689..5519)
                     /locus_tag="VLJ17_20545"
     CDS             complement(4689..5519)
                     /locus_tag="VLJ17_20545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV25403.1"
                     /translation="MRRGIDNLISQYTISWRRIAAMIERYWYLLRSSWPRLLELVYWP
                     AVQMLMWGFLQLYIGQNAGYFARAGGTFIGAVLLWDILFRGQLGFSVSFLEEMWSRNL
                     ANLMMSPLKPIEFVLAMMVMSIVRLLIGMVPVSLLAIGFFGFNLYGMGLALAAFFLNL
                     ILTSWAVGIFVSGVVMRNGLGAENLAWTVMFLLMPLTCVYYPVAVLPPWLQTVAWSLP
                     PTYVFEGMRALLIEHTFRADLMIEAFFMNVVLFGTGVVGFMLLLKSARRHGSLMQTGE
                     "
     gene            complement(5531..>6128)
                     /locus_tag="VLJ17_20550"
     CDS             complement(5531..>6128)
                     /locus_tag="VLJ17_20550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008140270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV25404.1"
                     /translation="GLLTPTSGIVRVLGNEMPRQRYRVLHRMNFESPYVEMPMRLTVR
                     QNLTVFGRLYSVAGLAERIAALADELDLVDLLDRPSGKLSSGQKTRVSLAKALINRPE
                     VLLLDEPTASLDPDTADWVRASLQRYRSERGATILLASHNMSEVERLCERVIIMKEGR
                     IEDDGTPAELLTHYGRETLEEVFLDVARGRSQARQPAQ"
BASE COUNT         1274 a         1858 c         1886 g         1110 t
ORIGIN      
        1 cccgcagccg acgcacccgg cggcgcagcc tcgtcggccg catcgtctac tggggcacag
       61 tggcgagcct ttgggcggtg atcgccgtaa tcggggccgc ggtctgggtc ggcgcgcatc
      121 tgccgccgat ccagtcgctc gaggtgccca agcgcccgcc gtcgtttcag atcgtcgaca
      181 tgccgggccg gccgctcgcg gtgcgcggcg acatgggcgg cgccgcggtc gcgctcaagg
      241 atctgccgcg ctacgtgccg caggccttcg tcgcgatcga ggaccgccgc ttctattccc
      301 atcacggcgt cgacccgatc ggggtgtcgc gggcgctcgt cgccaacctc ctgcgccgcg
      361 gcgtggcgca gggcggctcg accatcaccc agcagctcgc caagaacctg ttcctgacgc
      421 aggagcgcac gctcacccgc aagctgcagg aggtcgtgct cgcgctgtgg ctcgagcaca
      481 aatacagcaa ggcggagatc atcgagctct atctcaaccg ggtctatttc ggcgccggcg
      541 cctacggggt ggaggcggcg gcacaacgct atttcggcaa gtcggcgcgg cgtgtcaccc
      601 ttagcgaggc cgccctgctg gctgggctcg tcaaatcacc gtcgcgattg gcgccgacca
      661 agaactacga cggcgccgag cggcgcggcc agctcgtgct cgccgcgatg tccgacgccg
      721 gctttatcaa caaggatgcc gcccaagccg ccatggcgtt gggcccgtcc attgtcaggg
      781 ccagcggcgg cggctcctcg aactatgtcg ccgactgggt gatggatgtg ctcaacgatc
      841 tggtcggcct ggtcgacgag gacatcgtcg ttgacaccac catcgatgtc gcgtttcaag
      901 ccgcggccga aaaggcgctg ctcgaccagt tggcgcagaa gggccagaga ttcggggtgg
      961 agcagggcgc gctcgtgtcg atgacgccgg acggtgcggt gcgggcgctg gttggcgggc
     1021 gcaactatgc ggaaaaccaa ttcaaccgcg cgatcgcggc gaggcgtcag cccggctcga
     1081 catttaagcc gtttgtatat ctcacggcgc tcgaacgcgg ccttacacct gaatccgtga
     1141 gggacgaccg gccagttgaa ctcaaaggct ggcgccccga aaacttcaat cgtgaatact
     1201 tcggaccagt cacgctcacc caggcgcttg ccaattcgct aaattccgta tcggtacgcc
     1261 tcaccatgga attcggaccg accgccgtcg tgcgcaccgc acatcggctc ggtatcgcct
     1321 caaagctcga ggtgaatccc tcgatcgcac tcggcacttc ggaagtctct gtgctcgaat
     1381 tggtgtctgc ctatgcgccg ttttccaacg ggggccttgc ggtgattccg cacgttgtcg
     1441 agcgggtgcg caccacgcaa ggtggcaaga tactctatac gcgcaaccaa aatacgctcg
     1501 gccgtgtcat tgatgcgcgc tacgtcgcga tgatgaatgc catgatgcgg gagacggtcg
     1561 cgagcggcac cgcccgtcgg gcggacctgc ccggctggcc cgttgccggc aagactggca
     1621 ccagccagga tttccgcgac gcgtggttcg tcggctatac aagccagctc gtcaccggcg
     1681 tttggctcgg caacgacgac aacacgccga ccaagaagat caccggcggc ggattaccgg
     1741 tcgaggtatg gagccaattt atgagagccg cccatcgggg taaggcgccc tccgatcttc
     1801 cgggcggtgc cgttgcggcg atctcgcctt ctaatatggg cactccaatc ccgccggccg
     1861 gcgtttcggg cgggcgcggg cgcgaggcga cgcgtcccgc cgaaggcagc atggatggct
     1921 ggtttctcga gcggttgttt tcgcgacgtt gagacactca attctctctg catacgcgtc
     1981 gtttgacgcg ctgccgcgcc gaacggcaag gcagagctcc gcgccgcggc ttcgccgcgc
     2041 cgaggccgtc ataggcgatt ccgtagcgat gtagatcggt gccatgggcg tcaagccatg
     2101 ccttggctcg ctccatgtca ggacacatgc ggccaagcag gcgccagaac cgggccgagt
     2161 ggttcatttc ctggagatgg gcgacttcgt gcgccgccag gtaatcgagc acataacgcg
     2221 gcgccaacac caatcgccac gaaaacgata aaacgccgct ggtcgagcat gagccccacc
     2281 ggctcgcctg gtcgcggatc gaaatccgtc gcaccttaac gccaagtcgg tccgcgtaac
     2341 gcgcgacagc ggcttcaagg tcgcgcttgg cttcgcgctt gagataatcg gtaatccgcc
     2401 gggcgacatg tgcgtcatga ccggcgacat acaacagacg gcggccgtcg cggtcgattt
     2461 tcgtccacac tgtgccgcgc tcactgcgcc gatgcacgat tgcatgcacg atgccgcgta
     2521 gcggaatttc gatgccgtgc tcgaatggcg ccgcgcgcgg caacctgtca agccgcgccg
     2581 caatccaggc accgtgtttc tcagcaaact cacgagcttc ccgaaagctg ccgcgcggcg
     2641 gcatagtgag aaccgcttcg cgcgtgactg cgacgacccg caacgtatag cggcgggctt
     2701 ggcgatgacg ccgcagacga accagatgga cggcaccatc gcaaacaact tcaatggctt
     2761 ggggctcagt cggacgacgg taaaggagtg cacgcaaagt catggatggg aattccggga
     2821 gcagcttctt ggcccgatag tggcatattc gtcagattag caaggcagat tctttattga
     2881 ggtcggaacc acatcatctt gcgatcagat tgaggccaat cacaagctat ggcggccaaa
     2941 aacgatgaac gatgattcat tttattccga tcgctcccgg ctcatcggcg atcagaatag
     3001 ttgaataaat tcaatcactt aaatactatg tgcagggttt taaaaacagc cttgcaaaat
     3061 cgtcgcagtt acgcatcgcg gccgagaatc agcctcccgg ttcccggctc cacgttgatg
     3121 gtaggtgccg tcagcgcggg aggcacgaac cttagttgct aactggcttg atgatatgcg
     3181 gcttgcgcgc ccctagctgg cacggcgttg tatccgccgt gccgcgaatt atgggacagc
     3241 acgaaatccg cgatgcgagg tgcaatttcg gcgcggaagc gcgagccatt gaatacgcca
     3301 taatggccca cgccgggctg caaccaatgc gctttgagat tgtcgggaag gttgttgagc
     3361 agccgatgcg ccgcttcggt ctgtccgacg cctgagatgt cgtcgtgctc tccctccacc
     3421 gtcatcagcg cgacgcgtcg gatttttgat gagtccaccg gttggccgcg atgactcatg
     3481 gtgcctttag gcaatgcgtg acggacgaat acggtttcga ccgtttgcag ataatactcg
     3541 gccgctaggt ccataacggc aaggtactcg tcatagaact cgcggtgctt ttgagcggaa
     3601 tcgccgtcac cttgaaccaa atggtgaaac aggttgcggt gggcctcgat gtgacgatcg
     3661 agattcatgc tgacgaaacc gtgcaactgc agaaatcccg gatacacatc acgcatcaca
     3721 cccggttgag gaaacggcac cttggtaatg acgttgcgcc ggaaccactc ggtgccgcgg
     3781 gattccgcga gtgcattgac gcgggttgga ttgacgcgcg tatcgattgg gccgcccatc
     3841 agcaccatgg agtggggcac acaaggatct tcgaccgctt ccatgcgagc gaccgcagcc
     3901 agcacgggca cggacggctg gcacaccgcg atgacatgaa cgtcgccacg aagaaaatgc
     3961 aggatggaga tcagatagtc gatgtagtcg tcgagatcga accgtccttc gataagcgga
     4021 accatgcggg cgtcggccca gtcggtaatg tagacatcgt gattgggcaa aaacgcctcg
     4081 acggtgccgc gcaacaaggt cgcatagtgg ccggacaacg gcgcgacgat caacaaccgc
     4141 ggctgcggcc gctgcggcgc gtgttcaaaa acgcgcgtga agtgcaggag ccggcaaaat
     4201 ggccgttgcc aaggcgtttc gatattcacc ggcacccgtt caccgccgac cagcgtattc
     4261 gtgatgcccc attcgggccg gctatagcgg cgcgtggagc gctcgaacac ttcgcaggcc
     4321 gctgcaatcg acttgccgaa cgtcgtgagc gcgagcgggt taagagggtt cttgaatagc
     4381 agcttggtgg catcggctaa tgcccgcgag ggattgagcg ccgcttggct cacttcatag
     4441 aaccaataca tgggcgccga catgaggagc ccaccttcgc caggtagctt gggggcacca
     4501 ccgaactcac cgattgccat acggccttcc tcgtatttgc tgcgtcgcag caagatggtg
     4561 acttgtcatc cgtacgtcaa tataagggcg caaatataag ggcataggta cttagcggtt
     4621 atttatccaa aaggatgatg cggcggcaaa aataacggat tgctttaacg gaaatcaggc
     4681 ggggggcgtc attcccccgt ctgcatcagc gatccgtgcc ggcgggccga ctttaagagc
     4741 agcatgaagc ctaccacgcc ggtcccaaac aagaccacat tcataaagaa agcctcaatc
     4801 atcagatcgg cccggaaggt gtgttcaatc agcaaggcac gcataccttc aaacacatag
     4861 gtcggcggca gggaccatgc caccgtctgc aaccacggtg gcaacactgc aaccgggtaa
     4921 tacacgcaag tcagcggcat caacaggaac atcacggtcc aagcgaggtt ttcggcgccg
     4981 agcccattgc gcatgaccac cccggacacg aagatgccga ctgcccaact ggtgagaata
     5041 agattgagaa agaatgccgc aagcgcgagg cccatcccgt aaagattgaa gccgaagaag
     5101 ccgatcgcca acagcgacac cggcaccatg ccgatcaaaa gacggacgat gctcatcacc
     5161 atcatggcaa ggacgaactc aatcggcttg agcgggctca tcatcagatt ggcgaggttg
     5221 cgcgaccaca tctcctcaag gaatgacacc gaaaagccga gctggccgcg gaacagaatg
     5281 tcccatagca ggaccgcgcc gatgaaggtc ccgcctgcgc gggcgaaata tccggcattt
     5341 tggccgatat agagttgcag aaagccccac atcaacatct gcaccgctgg ccaatagacg
     5401 agttcgagga ggcgtggcca cgacgagcgc agcagatacc agtagcgctc gatcatcgcg
     5461 gcgattcggc gccaagaaat cgtatactgc gagatcaggt tgtcgatgcc gcgcctcatg
     5521 ggcatcctgc tcactgcgcg ggttggcggg cctgactgcg gccgcgcgcg acgtcgagga
     5581 agacctcctc aagggtttcg cgtccatagt gtgtcagcag ttcggccggc gtgccgtcat
     5641 cctcgatccg gccctccttc ataatgatga cgcgctcgca aagccgctcg acctcgctca
     5701 tattgtggga ggcgagcaga atcgtagcgc cgcgctcgga gcggtaacgc tgcaggctcg
     5761 cgcgcaccca atcggcggta tccggatcga gcgaggcggt gggttcgtcg agcagcaata
     5821 cctccggccg attgataagg gccttggcga gcgatacacg ggttttctga ccggaggaca
     5881 gcttgccgct cggccggtcg agcagatcga caagatcgag ttcatctgca agcgcggcga
     5941 tgcgttccgc gagcccggca acgctataga ggcgaccgaa cacggtcagg ttctggcgta
     6001 ccgtgagccg catcggcatc tcaacatagg gactttcgaa gttcatacgg tgcagcacac
     6061 ggtagcgttg acgcggcatt tcgtttccaa gcacgcgcac gataccggat gtcggcgtca
     6121 agagcccc
//
LOCUS       DATILV010000849         5451 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4299461, whole genome shotgun sequence.
ACCESSION   DATILV010000849 DATILV010000000
VERSION     DATILV010000849.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5451)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5451)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5451
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4299461"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..953)
                     /locus_tag="VLJ17_20555"
     CDS             complement(<1..953)
                     /locus_tag="VLJ17_20555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011155779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HSV25405.1"
                     /translation="MSEQIYEVSTEWSKRAHVDNTKYVSMYERSINDPTGFWAAEAKR
                     IDWFKPFTKVKNTSFDPHHVSIKWFEDGLTNVAHNCIDRHLAKRGDQVAIIWEGDDAT
                     HDRKITYRELHAEVSRFANVLKARGAKKGDRITIYLPMIPEAAYAMLACARIGLIHSV
                     VFGGFSPDSLAGRIEDAKSTIVITADEGVRGGRKVPLKANADAAADRAGGVTTIIVVR
                     RTGATVNMKSGRDFYYDEIAKGVAVDCPCEPMNAEDPLFILYTSGSTGKPKGVLHTTS
                     GYLVFAAMTHQYVFDYHDGDIFWCTADVGWVTGHSYIIYGPL"
     gene            complement(1145..1561)
                     /locus_tag="VLJ17_20560"
     CDS             complement(1145..1561)
                     /locus_tag="VLJ17_20560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008834619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1761 domain-containing protein"
                     /protein_id="HSV25406.1"
                     /translation="MKFAGVDYWAVVVAGIVGYAAGALWYWGWSKPWMEAQGFTPESI
                     KADQSPVPYLLAFVANLFMAWMFAGVIGHLGIGEVTIRNGVISAMAVWLGFVATTQTV
                     NYTFGKRPLKLLLIDAGHWLVVLLLQGAIIGFMGVS"
     gene            complement(1749..3437)
                     /locus_tag="VLJ17_20565"
     CDS             complement(1749..3437)
                     /locus_tag="VLJ17_20565"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HSV25407.1"
                     /translation="MATRGSVHKATARILTGALLGTLVSASAAFGELLLDLPNLALTG
                     HATSSEEGAMEGVLVSAQRAGSPISVTVVTDQAGRYGFPADRMPPGHYTLRIRAIGYE
                     LGSPDSVEVAAKGTVTADLALRRVDDMASQLTSTEWLISMPGAAEQKRPLIECMSCHT
                     LERVVRSKFTANEFVSILKRMANYANNSTMQRVQARVAEREVPEERARRVAEYLATIN
                     LSKRDRWNYELKTLPRPTGAATRIIITEYDMPRGTIAPHDVRTDADGFIWYSNFVEPY
                     LGRLDPRTGAHAEFAYALPKPNFPVGTLALEPDHDGNWWLAMMFQGGVMKFDTHTKTF
                     HHYPLPTELNSDTAQQSMVMPRQSHVDGKVWTNDVNSHSILRLDLATGAYERVDPFQG
                     MPIGSNRQHSPYGMAADKDNNLYFMDFGDESVGRVDAKTFRATIYPTPTSHSRPRRTM
                     LDEKGRLWFAEFAANKLGMFDLDRESIKEWDVPTPHTYPYDVYLDRNGELWSGSMSND
                     RILRFDPQTGKAVEYLLPRQTNIRRIFIDNTTTPVTFWAGNNHHAAILKIEPLD"
     gene            complement(3461..4012)
                     /locus_tag="VLJ17_20570"
     CDS             complement(3461..4012)
                     /locus_tag="VLJ17_20570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HSV25408.1"
                     /translation="MWRIAAAPPWCRNGLVVVPSQERFYTLDCSQKKDFGTPIKADRR
                     AETMAKSQRASLLLGLALVLPLAVVGMAWAGGASLDEDEEDQSNAGVSFFGFAKDLDR
                     GGGVADAKVSAEIKNRNASLVTRTDEQGHFKFSGFSKDIDPKDVEITCSKDGLKLQRT
                     VRRQPPGGDGATTIEVDCLMVKR"
     gene            complement(4394..4516)
                     /locus_tag="VLJ17_20575"
     CDS             complement(4394..4516)
                     /locus_tag="VLJ17_20575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25409.1"
                     /translation="MITSLFYRCHTTPKLLVISFFPVRDIFSGVSVGRKHCILG"
     gene            4788..5093
                     /locus_tag="VLJ17_20580"
     CDS             4788..5093
                     /locus_tag="VLJ17_20580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25410.1"
                     /translation="MNRNVNTNVNRNVNVNRNVNTNVNRNVNVNRNVNVNVNRAGAWV
                     RPSNYWWRPGGAIAAGAAIGFVTAATAVAWAGAPPATGYCWYYTDASRQQGFWDQCP"
     gene            5244..>5451
                     /locus_tag="VLJ17_20585"
     CDS             5244..>5451
                     /locus_tag="VLJ17_20585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018259661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HSV25411.1"
                     /translation="MVFIAGGTFRMGSDRHYPEEAPQHRVEVGSFFIDPLLVTNRQFA
                     EFVKATGYVTVAERPLNPADYPGAA"
BASE COUNT         1153 a         1629 c         1577 g         1092 t
ORIGIN      
        1 agcggcccat agatgatata gctgtgcccc gtcacccagc ccacgtctgc cgtacaccag
       61 aatatatcgc catcgtgata atcgaagacg tattgatgcg tcatcgcggc gaacaccaaa
      121 tagccgctgg tggtatgcaa cacccccttg ggtttaccgg tggagcctga agtgtagagg
      181 atgaaaagcg gatcctccgc gttcatcggc tcgcagggac aatcgaccgc caccccctta
      241 gctatttcgt cgtaatagaa atcacggccg gatttcatgt tcacggtagc gccggtgcga
      301 cgcaccacga tgatggtggt tacgccaccg gctcggtcgg cggctgcatc agcatttgcc
      361 ttaagcggca ccttgcggcc gccgcgcacg ccttcgtcgg ccgtaatcac gatggtggat
      421 tttgcgtcct cgatgcgccc ggcaagtgaa tccggcgaaa agccgccaaa cacgaccgaa
      481 tggatgaggc ctatgcgggc gcaggccaac atcgcgtagg cagcctcggg gatcattggc
      541 agatagatcg tgatccggtc acccttcttg gcaccgcgcg ccttgagcac attggcgaac
      601 cggctgacct cggcatgaag ctcgcggtag gtgatcttgc ggtcatgcgt ggcatcatcg
      661 ccctcccaaa taatggcaac ctgatcgccg cgcttggcaa gatgacggtc gatgcagttg
      721 tgcgccacat tggtgaggcc gtcttcgaac catttgatcg acacgtgatg cggatcaaag
      781 gatgtgttct tgaccttggt gaacggcttg aaccaatcga tgcgcttggc ttccgcggcc
      841 cagaagccag tcggatcatt gatcgaacgc tcgtacatgc tgacgtattt ggtgttatcg
      901 acgtgggcgc gtttgctcca ttcggtggaa acctcgtaga tctgttcact catgcttccg
      961 ctccctcacg cttcgcgatt tggcgccgcg ccctgcaaac gctctttcga tgtcattatg
     1021 cgccgcgcgt tcctgccgcc acaaggcatc gaatgtcaca ctttggtcgg ggccaattga
     1081 gcaacggcgg tcccgcgccc cgttccatcg ccgctgcgag actgcggcaa aacggagtaa
     1141 ggccctaaga tacgcccatg aagccgatga tcgcgccttg caacagcaat acgaccagcc
     1201 aatggccggc atcgatcagc aataacttga gcggacgctt gccgaaggta tagttgacgg
     1261 tctgcgtcgt cgcgacaaag ccgagccaca ccgccatcgc cgaaatgacg ccgttgcgga
     1321 ttgtcacctc cccgatgccg agatggccga tgacgcccgc aaacatccac gccataaata
     1381 aattcgccac aaaggccaac aagtaaggca ccggggattg atcggccttg atggattccg
     1441 gtgtgaagcc ttgcgcctcc atccagggct tcgaccagcc ccagtaccat aatgccccgg
     1501 ccgcgtatcc gacgatgccg gccacaacaa cggcccaata atcgacacca gcgaatttca
     1561 tggtggtatc ccccaattga tcgcccgtac atacaccggc agcgcgcctc tatcatctgg
     1621 ccgttatcca cagctcgtcc cctcatgcag gaggtcattt ggaaaagcct atgggcagca
     1681 ggttggcggc gagttgcagg agcgcctgat gatcgaggcg ttgcgcaaga aggggcaccc
     1741 aacgcgcgct aatcgagcgg ttcgatcttg agaatggcgg cgtggtgatt gttgccggcc
     1801 cagaaagtta ccggcgtcgt ggtgttgtca atgaaaatgc ggcgaatatt ggtctgacgc
     1861 ggtagcagat attcaaccgc tttcccggtc tgcgggtcga accgcaaaat ccgatcattc
     1921 gacatcgagc cgctccacag ctcgccattc cgatcgaggt aaacgtcgta cggataggta
     1981 tgcggtgtcg gcacgtccca ctccttgatg ctttcgcgat cgaggtcgaa catacccagc
     2041 ttgttggcgg cgaattccgc aaaccacaat cgcccctttt cgtccagcat ggttcgacgc
     2101 gggcgcgagt gggacgtcgg cgtcgggtaa atggtggcgc ggaatgtctt ggcatcgacg
     2161 cgccccacgc tctcgtcgcc gaagtccatg aaataaaggt tgttgtcctt atcggccgcc
     2221 attccataag gcgaatgttg gcggttggaa ccgatcggca tgccctgaaa cgggtcgaca
     2281 cgttcatagg cgccggtcgc cagatcgagc cgcaaaatcg aatgcgagtt gacatcgttg
     2341 gtccacacct tgccgtccac atgggattga cgcggcatca ccatggattg ctgagcggtg
     2401 tcggaattga gttcggtcgg caacggataa tggtggaacg ttttggtgtg agtgtcgaac
     2461 ttcataaccc cgccctggaa catcatggca agccaccagt tcccgtcatg gtcaggctcg
     2521 agcgccagcg tgccgactgg aaaattcggc ttcggcaacg cataggcaaa ttccgcatgg
     2581 gcgccggtac gcgggtcgag tcgcccgaga taaggttcga cgaaattcga gtaccagatg
     2641 aaaccatcgg catccgtgcg cacatcgtga ggtgcaatgg tgccgcgggg catgtcgtat
     2701 tcggtgatga tgattcgcgt cgccgcgccg gtcggacgcg gcagcgtctt gagttcgtag
     2761 ttccagcgat cccgtttgct caaattgatc gtcgcgagat attcggcgac tcgtcgcgcc
     2821 cgctcttccg gaacttcacg ctcggcgacc cgcgcctgca ccctctgcat agtggagttg
     2881 ttggcatagt tcgccatgcg cttgagtatg ctgacgaatt cgttggccgt gaacttcgag
     2941 cgcacgacgc gttccagcgt gtggcaactc atgcactcga tcagcggacg tttttgctcg
     3001 gccgcgcccg gcatgctgat cagccattcg gtcgaggtga gctgcgaggc catgtcgtca
     3061 accctgcgca gcgcaagatc agccgtcaca gttcctttgg cggcgacctc gacactgtcc
     3121 ggcgaaccaa gctcatagcc gatcgcccgg atgcgcaacg tataatgccc tggcggcatg
     3181 cggtcagccg ggaagccgta gcgaccggct tgatccgtaa cgaccgtcac gctgataggc
     3241 gacccggcgc gttgcgcact taccagcacg ccttccatgg cgccttcttc agaagatgtc
     3301 gcatgaccgg tcagggccaa attgggcaaa tcaagcagca gctcgccaaa agccgcgctg
     3361 gcagaaacca gcgtgccaag taaggcacct gtcaaaattc tagctgtcgc cttatgcaca
     3421 ctgccgcggg tagccacggg aaccgcacgc ctgctatcaa ttaccgtttg accatcaggc
     3481 aatcgacttc gatcgtcgtt gcgccatcac cacctggcgg ctggcgccgc acggtccgct
     3541 gcagcttgag gccatccttg ctgcaggtga tctcgacgtc cttcggatca atgtccttgc
     3601 tgaagccgga aaacttgaag tggccctgtt cgtccgtgcg agtcacaagg cttgcattac
     3661 ggttcttgat ttcggcgctc accttagcgt cagccacgcc gccgccacga tccagatcct
     3721 tggcgaatcc gaaaaacgaa acgccggcgt tcgactgatc ttcctcgtct tcgtccagcg
     3781 aggcgccgcc ggcccatgcc attccgacaa ctgccagagg aagcaccagt gccagcccta
     3841 acaggagaga tgcgcgttgt gatttcgcca tggtttccgc ccgcctatcg gcctttatgg
     3901 gagtgccaaa atccttcttc tgtgaacagt ctagcgtata aaaccgttcc tgagaaggaa
     3961 caacaacaag cccattacgg caccaaggcg gggcagcggc gatgcgccac aaccggttga
     4021 acggccccca tatctgcgga ttcttgcggg agcggaccgg gatctggtcg gagggcctgc
     4081 gctgcgctaa tgcccgaaca aacagctacg ccccgcacgg ggtgcgcggc gtggcctccg
     4141 gtttttgatc gaatttatac gagcggcacg tattcaacag cgccggtaaa cggatccacg
     4201 accttttctg ccgggaacca atagatctgt tcgtcgaggc cgtcgaagaa ggaatagccg
     4261 atatatacga tcgccgattg ggcgatttga tggccagcct gctggactgg ctgtggcaga
     4321 ttattcgcgc taagatctca gggtcgtatt ggaccacggt ccaatcgacc gcgatcagca
     4381 aggttcttta ggatcagccc aagatgcagt gctttctgcc gacggatacg ccggagaaaa
     4441 tgtcgcgcac cggaaagaag ctgatcacca gaagcttggg cgtcgtatgg caacgataga
     4501 atagggaggt aatcatgagg cggttcgcat tgctgatttc ggtcttgttt gcgctgccat
     4561 ttgggttgtt tggcgcacca ccggctcaat cgttgccgtc aaccaccgat gcgaatgcaa
     4621 gtggagacgg cgcaaggcgc gcggctgcaa gcggcagcga taacaccatt gttctggcgt
     4681 atggcggggc tcacgctggc agggcgaacg cgaacgtcaa tcgaaatgca aacgttaacc
     4741 ggaacgcgaa cgtcaatcgg aacgcaaatg tgaaccggaa tgcaaacgtg aaccgaaatg
     4801 tgaacacaaa cgtcaaccgc aatgtcaacg tgaatcgaaa cgtgaacaca aacgtcaacc
     4861 gcaatgtcaa cgtcaatcga aatgtaaacg tgaacgtcaa ccgagctggc gcctgggtgc
     4921 gtccatccaa ctactggtgg cgtcccggcg gcgcgatcgc ggctggcgcg gcgatcggct
     4981 tcgtcactgc ggcgacagcg gtcgcctggg ccggcgctcc cccggctacc ggatattgct
     5041 ggtactacac cgatgcaagc cgccagcagg ggttctggga ccagtgcccg taagcgccga
     5101 gtatgatacc tcaattcacc ccaaaaatgt tggggccgct tagcgatcga gcataagcaa
     5161 tgggtaccgg cgccgaaaca ataactgcgg cgatcactgc acaaccggac ccccctggcg
     5221 ctgagcgtga ccggaccgcc ggcatggtct tcattgccgg cggaacgttc cgcatgggct
     5281 ccgatcggca ctatcccgag gaagcgccgc agcatcgcgt cgaggtcggg tccttcttca
     5341 tcgaccccct gctcgtcacc aatcgtcaat tcgccgaatt cgtcaaggcg accggctacg
     5401 tcacggtggc cgagcggccg ctgaatcccg ccgactatcc cggcgcggcg c
//
LOCUS       DATILV010000850         2610 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2511590, whole genome shotgun sequence.
ACCESSION   DATILV010000850 DATILV010000000
VERSION     DATILV010000850.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2610)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2610)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2610
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2511590"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            215..349
                     /locus_tag="VLJ17_20590"
     CDS             215..349
                     /locus_tag="VLJ17_20590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25412.1"
                     /translation="MATFAKHQVTAEGWFVAHPDLTVAEIDRLKRIGKAVEEFLDKVG
                     "
     gene            392..1006
                     /locus_tag="VLJ17_20595"
     CDS             392..1006
                     /locus_tag="VLJ17_20595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003601162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25413.1"
                     /translation="MATLELTRAEQDRVANKIKKVQELYADAPEVGRVALKNGLEALR
                     HELSAATQRQSAGRIGARQGRVSELTAIAPLVPGGGQRVRGLLELLEGNFKGADLVGT
                     LHDMRFVLLDNDTKLLFATTYDGEWDAYIDDFATKIPNSMDILFCNCAGWPGIHSPAV
                     KDWIVSHQLTADAWYVASPNLTVAETKRLEKVGLAVEEFLDKIG"
     gene            1074..2447
                     /locus_tag="VLJ17_20600"
     CDS             1074..2447
                     /locus_tag="VLJ17_20600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011983005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxidase"
                     /protein_id="HSV25414.1"
                     /translation="MLSAKESVGGNLSVRAPTLELHEIQATVLRQRPAPYLGTHLFLR
                     VDDAQAGRAFLRRLTPHVDSAAGWSNAADAWLAVGITYAGLEALGLPQDSLQSFPEPF
                     RQGMAARARQLGDEGVNDPKNWDKPFGKGQIHIGVSAFSDSEEKWRRALAIVREQYEG
                     FSGVSILAMQDFGAQPGDRNSLGYKDGIDQPAIEGSGAEPLPGQGRPIKAGEFILGYP
                     GEAGVPLPMPQPDILGRNGTYVGLRKYQSRVGAFNRFLRANGSTEDEWELVAAKLVGR
                     WRSGAPLTLAPDVDNPTLGTDPQRNNDFDYANDPQGRRVPFGSHIRRMNPRDTKLTRL
                     TDVNIHRLIRRGTTYGPPYDSNALSKQDDEVPRGSYFLFMSAKAMATIEFLQQEWVND
                     GDFIGASGERDPIIGRQQEGATFTIPKEPVRRRIHGIETFNVLRGGEYFFMPSISALK
                     WLANLSA"
BASE COUNT          539 a          789 c          827 g          455 t
ORIGIN      
        1 ggctggcctg gcattcgcca tcccggagcg aaggattatc tggcctagca ccagatcacg
       61 gcagaaggct ggtacatcgc ctatccggat ctcacggtgg cggagatcaa acgcctgcag
      121 cgtgtcggca aggccgtgga cgaattcctc gacaaggttg cttgagccca ggaattacca
      181 gcaagcacga gccgaagagg cggagcacgc caccatggca acgttcgcga aacaccaagt
      241 tacggcagaa ggctggttcg tcgctcaccc ggatctgaca gtggcggaga tcgatcggct
      301 caagcgcatc ggcaaggcgg ttgaggaatt cctagacaag gttggttgag gccaatcgca
      361 acacgaaacc gaagaacaca ggagaataga catggcgacg cttgaactga cgcgcgccga
      421 gcaggatcgg gtcgcgaaca aaatcaaaaa ggtacaggag ctttacgcgg acgcgcccga
      481 ggtgggccgg gttgcgctca agaacgggct tgaggcactc aggcacgaac tgtcggcggc
      541 gacgcagcgc cagagcgccg gccggatcgg cgcacgccag ggccgggtat cggagctgac
      601 ggcaatcgct ccgctcgtgc cgggcggtgg gcagcgcgtt cgcggtcttc tggaactcct
      661 ggaaggcaac ttcaagggcg ccgacctggt cggcacgctg cacgacatgc gcttcgtatt
      721 gctggacaac gacacgaagc ttcttttcgc caccacctat gacggcgagt gggacgccta
      781 catcgacgac ttcgctacga agatccccaa ctcgatggac atcctgttct gcaattgcgc
      841 cgggtggccc gggattcaca gccccgccgt taaggactgg atcgtcagcc accagctcac
      901 ggccgatgcc tggtacgtcg cttcgcccaa tctcaccgtt gccgagacga aaaggctcga
      961 gaaagtcggt ctggcggtcg aggaattcct cgacaagatt ggatagccgc agcggccaat
     1021 cgttcgctcg ggggccaggt gagaatggcc cggacccacg aaaggatgcg cttatgttgt
     1081 ccgcaaagga gtctgtcggc gggaatcttt cggtgcgcgc gccgacgctc gagttgcatg
     1141 agatccaggc aaccgttctc aggcagaggc cggcgccgta cctcggcact cacctgttct
     1201 tgcgcgtcga cgatgctcaa gcgggccggg cgttcctccg tcggctgaca cctcatgtcg
     1261 attccgccgc aggctggtcg aatgcggccg acgcctggct ggcggtcggg atcacctatg
     1321 cgggccttga agcactcggg cttccccagg attcgctgca aagcttcccc gagccgttcc
     1381 gccaagggat ggcagcgcgc gcccggcagc tcggggacga aggcgtcaac gatcccaaga
     1441 attgggacaa gccgttcggc aaaggtcaaa tccatatcgg cgtaagtgcg ttcagcgatt
     1501 ctgaagaaaa gtggcggcgg gcgcttgcga tcgtccgcga gcaatacgag ggcttctcgg
     1561 gcgtcagcat tttggctatg caggacttcg gcgctcagcc gggcgaccgc aattcgctgg
     1621 gttacaagga cggtatcgac cagccggcga tcgagggcag cggcgccgag ccgctacccg
     1681 gccagggacg gccgatcaaa gccggtgagt tcattcttgg atatccaggt gaagccgggg
     1741 tccccctgcc gatgccgcag ccggacatcc tcggtcgcaa cggcacctat gtgggcttgc
     1801 gcaagtatca gtcgcgcgtc ggcgcgttca accgcttcct ccgggccaac ggaagcaccg
     1861 aggacgaatg ggaattggtc gccgcgaagc tggtcggccg ttggcgcagc ggcgccccac
     1921 tgacgctggc gccggatgtc gacaacccta cgctcggaac tgacccgcag cggaataacg
     1981 acttcgatta cgcgaacgat ccgcaaggcc ggcgggtgcc gttcggaagc catattcggc
     2041 gcatgaaccc gcgggacacc aaactcaccc ggctgaccga tgtcaacatc catcgcctca
     2101 tcaggcgcgg tacgacctat ggaccaccat acgattcgaa cgcgctgtcc aaacaagatg
     2161 atgaagtgcc gcgcggctcc tattttctgt tcatgagcgc gaaggcgatg gccaccatcg
     2221 aattcctaca acaagagtgg gtcaacgatg gtgacttcat cggcgccagc ggcgagcgtg
     2281 acccgatcat cgggcggcag caggaagggg cgaccttcac gattccgaag gagccggtca
     2341 gacgacgcat ccacggcatc gaaacgttca acgtgcttcg cggcggcgag tactttttca
     2401 tgccaagcat cagtgcattg aagtggcttg ccaacttgag cgcttaagcg gaggctgatg
     2461 atgtccgatc atgttgatgg tccgcggtcg attggcgacc cttcggccga tgtcaccgac
     2521 ctgttcgcgt tcacgagtcc ggagaacccg acgcgcaccg tgcttgccat gtgcgttttt
     2581 ccttcagccg gcgaaagtac gatcttctcg
//
LOCUS       DATILV010000851         1756 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_462428, whole genome shotgun sequence.
ACCESSION   DATILV010000851 DATILV010000000
VERSION     DATILV010000851.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1756
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_462428"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..797)
                     /locus_tag="VLJ17_20605"
     CDS             complement(<1..797)
                     /locus_tag="VLJ17_20605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25415.1"
                     /translation="MAFGILWLVCATSAHAQTKSQTQSEQQSLNWYYSAVFGTGVYKA
                     GDTVVSVLQVPFGHELKAPSADEWGLKLVVPVSVGFHNFEFDQLLEGKTPNSVGTLSI
                     FPGVEAQIPVASNWRLKPYANVGWGWDLSGGGGALIYAGGVKSLFALPVARNVELSLG
                     NQLTLAGYSPEGGSNQPLGIFVAGANVEVVSEWKLLDRPLIVGTHLIYYYYFNRLRFP
                     TANDPDNKISEQGEIAISLSVKKAIDFSLFDLDRIGLGFRFGAGLKGV"
     gene            complement(910..>1756)
                     /locus_tag="VLJ17_20610"
     CDS             complement(910..>1756)
                     /locus_tag="VLJ17_20610"
                     /inference="COORDINATES: protein motif:HMM:NF044972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HSV25416.1"
                     /translation="PGLATVVVIFFITRGVAHLLNGFFRRVEAQHIRLGWLDEDTVKP
                     TRRIATIVLWLFALAMAYPNLPGAQTDAFRGLSVLVGLMVSIGASSLVAQAASGMMLM
                     YSRALRAGEYVRIADMEGTVVELGMFATRIHTGTGEELILPNAFVLANTTRNYSRTVP
                     GRGFVLQVKVTIGYSTPWRQVHAMLLEAARRTHGILTDPASYVIQSALSDFYVEYKLV
                     AYAGPEAPAKRALALNDLNANVQDVFNEYGVQIMSPHYLADPAHPQVVPKERWFEAPA
                     KRPEP"
BASE COUNT          344 a          553 c          533 g          326 t
ORIGIN      
        1 acgcccttta gtccagcgcc aaagcggaag ccgagcccga tccgatcgag gtcgaagaga
       61 ctgaagtcga tcgccttctt gaccgacagg ctgatggcga tttccccctg ctcggagatc
      121 ttgttgtcgg ggtcgttggc agtcgggaag cgcagccggt tgaagtaata gtagtagatc
      181 aaatgggtgc caacgatgag cgggcgatcg agcagtttcc actccgagac gacctcgacg
      241 ttggcaccag cgacaaatat gcccagcggt tgattactgc cgccttctgg agagtacccc
      301 gccagggtga gctgattgcc caggctcaac tctacgtttc gtgcgaccgg caacgcgaag
      361 aggcttttga cgccgccggc gtaaatcaac gcaccgcccc cgccggacag gtcccatccc
      421 caaccgacat ttgcataggg cttaaggcgc cagttgcttg ctactggtat ctgcgcctcg
      481 acgccgggga aaatgctgag tgtgcccacg ctgttcggcg tcttgccttc gagcagctgg
      541 tcgaactcga aattgtggaa gccgacggac accggcacga ccagcttgag gccccactcg
      601 tcggcgctcg gtgccttcag ctcgtgcccg aacggaacct gcagcacgct caccaccgtg
      661 tcgccggcct tgtacacacc ggtcccgaat accgcgctgt agtaccagtt aagggattgc
      721 tgctcggact gcgtttgaga tttggtctga gcgtgcgcgc tcgttgcgca gaccagccac
      781 aggatcccga aggccaaggc gtacaacggc ctcagcactc gcgcatcgaa tgcgaagcga
      841 tgggagggca agacgcgcct gttcgttcgc agctctattc tgttcggctc cggccaccgc
      901 gctggctgct tatggctccg gccttttcgc cggcgcctcg aaccagcgct ccttcggaac
      961 gacctgcgga tgtgccggat cggcgagata gtgtggcgac atgatctgca cgccgtactc
     1021 gttgaacaca tcctgtacgt tggcattgag gtcgttcagc gcgagcgccc gcttggcagg
     1081 tgcctcgggc ccggcgtagg ccaccagctt gtattccaca tagaaatcgg acagtgcgga
     1141 ttggatcaca tacgacgccg gatcagtcag gatgccatgc gtgcgtcgag cggcttcgag
     1201 cagcatcgca tgcacctgcc gccacggcgt ggagtagccg atcgtgactt tcacctgcag
     1261 gacgaagccg cgcccgggca ccgtgcggga atagttgcgc gtcgtgtttg ccagcacaaa
     1321 ggcgttgggc aagatcaact cctcgcctgt gccggtgtgg atgcgggtgg cgaacatccc
     1381 cagttccacg accgtgcctt ccatgtctgc gatcctgacg tattcgcccg ctcgcagcgc
     1441 acgcgaatac atgagcatca tgccactcgc cgcctgcgcc accaggctgg aggcgccgat
     1501 cgacaccatc aaacccacca gaaccgagag acccctgaac gcatcggttt gcgcaccggg
     1561 caaattagga taagccatcg ccagcgcgaa cagccacagg acgatcgtcg cgatgcgtcg
     1621 cgtgggtttg accgtgtcct cgtcgagcca gccgagccgg atgtgctgtg cctcgacgcg
     1681 ccggaagaaa ccgttgagaa gatgcgcaac cccgcgggtg atgaaaaaga tgaccacgac
     1741 cgtcgccagg cccggt
//
LOCUS       DATILV010000852         2723 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4050246, whole genome shotgun sequence.
ACCESSION   DATILV010000852 DATILV010000000
VERSION     DATILV010000852.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2723
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4050246"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            274..1332
                     /locus_tag="VLJ17_20615"
     CDS             274..1332
                     /locus_tag="VLJ17_20615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25417.1"
                     /translation="MIYSYAELPPNANDANLWAVRLDQQGYHIVGQPQRLTSGPDGKM
                     RASISADGKHLTYLRWAESPVVYVTQVDRAGGSLAPLRQLGLIERRNLPFSWTPDSQS
                     VIFSSDRDGVFHLFKQSIDQPAPDLLVGGDQSVTSARLNPDSSEILFVRNPDPGDRQW
                     LTRLMRLPLSGGTPQLVLAEPGITNFQCSRAPSAVCVLSQVSSDSLDFFTFDPVTGKK
                     TPLTRIEGAASHLENWSLCPDGLTLALAKKTHVPGPGNIRLFSIADGKDRTLTLQDWS
                     GISSLDWAADGRTIWVTASSPAGIPTLLNVDLRGRAKPFLQEHERDLGWAIPSPDGRH
                     LAIWEASANSNAWLLEGF"
     gene            1675..2721
                     /locus_tag="VLJ17_20620"
     CDS             1675..2721
                     /locus_tag="VLJ17_20620"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HSV25418.1"
                     /translation="MHTSQVIQAWGKILKGEPPSLSIEITRECPLKCPGCYAYDVAHL
                     GGGRTLRDLNDRKGQSLVDGVLEVVDRLKPLHLSIVGGDPLVRYRELELLIPLLLARG
                     IHVQIVTSAFRTMGPTWARLPHLHIVVSIDGLQPEHDVRRAPATYDRILKNIVGQRIT
                     VHCTVTGQMMKRPGYLAEFLEFWTPRPEIKKVWFSLFTPQVGDRMPEILSAEERARAI
                     ADMMELRKQYSKLDMRAGLIRQFASPPHSPQDCVFALTTQTLSADLQTKITPCQFGGN
                     PDCASCGCIASMGLAAVASHKLGGILSVGTIFKASVKIGQRRAKARAKHQAKDAFRIL
                     QGTEERCGKGGIGL"
BASE COUNT          549 a          845 c          748 g          581 t
ORIGIN      
        1 cttcgcggag agtacggccg ccaggagatc tggctggccc agcccgacgg tggcagcgct
       61 cataagctcc tcggtgagcc cggcgacaat atcagcgcct tcgcatggtc ccccgatgga
      121 caccgcatcg cttatatgag ctcgcgctat ctccatggga tggaggagac cgacgcttcc
      181 ctattcattc gcgatctagc cactcaagcg acgaaccgct tgttgacgag cgcacgcctg
      241 cgcggcgctc tactgtggac tcccgacggt cgcttgatct actcctatgc cgagctgccg
      301 cccaacgcga atgatgccaa tctctgggcc gtgcggctcg accagcaggg ctatcacata
      361 gtgggccagc cccagcggct taccagcggc cctgacggca agatgcgcgc cagcatctcg
      421 gcggacggaa agcatctgac ctatctccga tgggccgagt cccctgtcgt ttacgttacc
      481 caagttgacc gtgccggtgg ctcgctcgct cctttgcgcc agttgggcct catcgaacgc
      541 aggaatcttc ctttttcctg gaccccggac agccaatccg tgattttctc ttcggatcgc
      601 gatggcgtct tccatctttt caagcagtct attgaccagc cggctccgga cttgctcgtc
      661 ggcggcgatc agtccgtcac gtcagcccgg ctgaatcccg atagctccga gatcctcttc
      721 gttcgcaatc cggatcccgg ggaccgtcaa tggcttacgc gcctcatgcg ccttccgctc
      781 tccggcggca ctccccaatt ggtgcttgcc gaacccggca ttacgaattt tcagtgttcc
      841 cgcgcacctt ctgccgtttg cgttcttagc caggtttcct cggatagcct ggatttcttc
      901 acgttcgacc cagtcacggg aaagaaaact cccttgactc gcatcgaagg cgccgcctcg
      961 catttggaaa actggtctct ctgccccgac ggcttaactc tcgccttggc caagaaaacg
     1021 catgttcccg gtcccggcaa cattcgcctt ttttccatcg ctgatggcaa ggatcgcact
     1081 ctcacactgc aggactggtc cggcatctcc agcctggact gggccgccga cggacgcacc
     1141 atctgggtta ccgcttcgtc gccggccggc ataccgacgc tcttgaacgt cgatttgcgc
     1201 ggccgcgcga aacccttcct ccaggaacac gaaagagatc tcggctgggc catcccctct
     1261 cccgacggac gccatctcgc tatctgggaa gccagcgcca actccaacgc ctggctcctc
     1321 gaaggtttct gaacattcgc caatcattgt gtaggcacga ggaactagtc ccgacgcggt
     1381 cgggatcgcg ccctcttgaa gtggccggtc tttcgcgttc gctgcgtccc ggcccgtcgc
     1441 atgcgtcgct tatggggaat agtcgtagtc accgggtacc agggaattcg gagtctgcta
     1501 aacgtagaac tcatctatcc tgttctcgtc gcaagctatc tcccacaccg tttcccgcat
     1561 cgaaagaaga gggagccatt gcctccgtgg ccaatcgaac ggaaaaaacg atcagacgga
     1621 ctctctgaac tgaaatgact gcaggcaaga cacatcggaa aaggactacc accggtgcac
     1681 acctctcaag tcattcaagc atggggcaag atcctcaagg gtgagccccc ctctctttcg
     1741 atagaaatca cgcgtgaatg ccctttgaaa tgtccgggct gttacgcgta cgacgtcgcg
     1801 cacctaggcg gcgggcggac attgcgcgac ttgaacgatc gaaaaggcca atccctggtc
     1861 gatggagttc ttgaagtcgt cgatcggctg aagcctttgc acctatctat tgttggaggt
     1921 gaccctctag tccgttatcg cgaactcgag ctgctgattc ccctgctgtt ggcgcgcgga
     1981 atccacgtgc agattgttac cagcgccttc cgaacgatgg gtccgacttg ggcgaggctg
     2041 ccgcatctgc acatagttgt gtccattgat gggttgcaac cggagcacga tgtccgccga
     2101 gcgccggcaa cctacgatcg cattcttaag aacatcgttg ggcagaggat cacggtccat
     2161 tgcacagtca caggtcaaat gatgaagcgc cccggctacc tcgccgaatt cctggaattc
     2221 tggacgccac gcccggagat caagaaggta tggttcagcc tgttcactcc tcaggttgga
     2281 gatcgaatgc cggaaatctt gagtgcagag gagcgggcgc gggccatcgc ggacatgatg
     2341 gaattgcgaa agcaatattc gaaactggac atgcgcgcgg ggctgattcg gcagttcgcc
     2401 tcgcccccgc acagccccca agattgtgtt ttcgcgctca cgacccagac attgtcggcc
     2461 gacctgcaga caaagatcac tccatgccag tttggcggta atcctgattg cgcatcctgc
     2521 gggtgcatcg catccatggg cctggccgcc gtagcttcgc acaaattggg aggaatcctc
     2581 tccgttggga cgattttcaa agcctctgtc aagattggcc agaggagagc gaaggctaga
     2641 gcaaagcatc aggccaaaga cgcatttcgg atattgcaag gaaccgaaga aaggtgcggc
     2701 aaaggaggga ttggtttgtg aga
//
LOCUS       DATILV010000853         3201 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_718678, whole genome shotgun sequence.
ACCESSION   DATILV010000853 DATILV010000000
VERSION     DATILV010000853.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3201
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_718678"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            532..873
                     /locus_tag="VLJ17_20625"
     CDS             532..873
                     /locus_tag="VLJ17_20625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019906188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HSV25419.1"
                     /translation="MSTRRILWVAALLGAISAPVFAQTPQPSKPAAPAVTTPAKPANP
                     TTPAPVVNKINLNTATATELDTLPQIGPARAKAIVEARAKGKFKNWDDFVARKVVPSN
                     AEAAIKDLVSF"
     gene            1168..1392
                     /locus_tag="VLJ17_20630"
     CDS             1168..1392
                     /locus_tag="VLJ17_20630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25420.1"
                     /translation="MPQFTLMIHIGRILPAWAQGASVIRFNASDRVAALRFSERHFSH
                     QIEEFPDEIDRAELCDADGAIVREGQSSNA"
     gene            2684..>3201
                     /locus_tag="VLJ17_20635"
     CDS             2684..>3201
                     /locus_tag="VLJ17_20635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007600799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSV25421.1"
                     /translation="MMSADGIEVRRLIQEDPTDAVLYRGIRLEALQANPEAFGSTFEV
                     ENLQPLSWFSDRLSSSTVLGAFRDTELVGIAGFAVQQGQKEAHKGILWGMYVRPAARN
                     AKVGRRLVEAVCNHARQQVELIQLSVVVENERARSLYARLGFLEYGVEKNALKQAGRY
                     CDLVLMAKDLSRG"
BASE COUNT          682 a          927 c          934 g          658 t
ORIGIN      
        1 ggcccagggc atcggtttgc gcgatggccc agaagggcct gagtgggaca tcagcccgac
       61 cgagagcaga tagcgtatgc acggtgaatt gcgcacctgc atcatcgcgg cgaacccgtt
      121 caccaccttc ttcacggtgg cgaccgagag ttagagttcc gctggactga cgacaacggc
      181 caagtcgaga ccgcctcggc gaagatcact ggaatgagcg acagtacgtc actgcgacat
      241 aaaaaagcag ttatcagcga tttatccgca tagcggccga acgcgcggtg catcggctga
      301 aatatgacgg catttgtcgt cgtaagtcag cggcgcgatc tcgtccttca gggccatcga
      361 tccggaaagc ctgtacgttt cccacgcgca atattcacgg tgtgttcagg cgctttcgtg
      421 caaacacctc cgcgcaatcg cgtagcatac gcgatgtccg atcgatcgtc gttttgcccg
      481 gtaacgaacg tcgcggatag ctgttccggg ctgcaataca ggacagcaca catgtcgact
      541 cgtcgcattc tttgggttgc ggcacttctt ggtgcgatct cggctccggt tttcgctcaa
      601 acgccacaac cgtcaaagcc cgcggcacct gccgtcacca ctccggcaaa acccgcgaat
      661 cccaccacac cggcacccgt cgtcaacaag atcaatctca acacggcaac ggcaacggaa
      721 ctcgatacgc tcccgcaaat tggcccagcg cgcgccaagg ccattgtcga ggcccgagcc
      781 aaaggcaagt tcaagaactg ggacgatttc gttgcccgca aggttgtccc gtcgaacgct
      841 gaggcagcta tcaaggactt ggtcagcttc tgagcggcgt gcctacgttc gaattggaca
      901 acggtctcgg cggccccgcc ggaatccggc ggggcgatct taccctagcg gcgcggcgcc
      961 ggacgacatg atgtgacgcg gagccaatca aatgcgggct gtggcagttg caacgtttcg
     1021 tagtcgcccc ggctgctgtc gacgagctgc tctcgcagat gagggatacc ttccgcgagt
     1081 ctatcgcaaa gcgattttgt gcccggaccc acaacagccg ctgacagcat atagcgccgg
     1141 gggggcgcga gcgcttatca ttggtgcatg ccgcagttca ctctgatgat ccacataggg
     1201 cgaatccttc ccgcttgggc gcagggcgcg agcgtcatac gcttcaacgc ctcggataga
     1261 gttgcggctc tgcgtttttc ggagcgccac ttttctcatc aaatagaaga gtttccggac
     1321 gagatcgatc gcgccgaact ttgcgatgct gacggcgcga ttgttcggga agggcagagc
     1381 tctaatgcct aggccgccaa aacgacgcgg cgatcccgcc caactcgcca agctcatcgt
     1441 caatatcgcg gctggagaaa ttgaagattg tgagccgacg gcacaagaac aagcaaggac
     1501 cctatgtttt tgaaatggat aagatcatca gaacgtcgtc atgtgcttgc gggcgtgtcc
     1561 agtgccaagg agtaggcgcg ccgatcttga gcgcggtctg ttactgcgac gattgtcagg
     1621 ctggagggca gcaaatagag gcgctgcccg gtgcgacgcg tgttctggac gctgacggcg
     1681 gcacgcctta tctgacctat cgagacgacc ggttcagttg tgtaaaagga gcggatctct
     1741 ttggcgagct acaaaattac agatcacgca cccacccaac ggttcgtggc gtcgtgttgc
     1801 aactcaggca tgttcttgaa gtttggccct ggtcattggg tctcagcata tcgtgcccgt
     1861 tttgaaggcg acctgccgcc catcgagatg aggacacaga caaagtaccg cgacgccgat
     1921 gcggcaatcc cgcacgatgc gccgagctac cgcagatttc cgatgaaatt attcataaaa
     1981 ctgatcgtat cacgttttgc gatgctgatc ggaagataag cccgattccc tgcaaggcga
     2041 ctcgttagcc caactccacg tgattggaac ttccgctcgt ggcctggctc tgccagttgg
     2101 cgcggcgcag taatttctct gctgtaggga cctaagcgga gatgctctgc ccggcatcac
     2161 gcatgaattt catcgaccag cgtcggatcg tcatccccag ccccgtcttg ttgacgcgcc
     2221 tcgacacggg gcacatacgc agtttgtcgg ccgcggccga acgcagcaat tcggtcccgc
     2281 ccccctccga ggcaagctcc gaaatccgcg tcgtcgacgg caaatatcac attatgacta
     2341 gtccattgcg aagaagccgg cgtccgtgat cctgttgcgt ctcacgtaag ccgggtgttt
     2401 gccccgcgca ccttctcaat cgtcgcagtc gcgagcccct cgcacgagtg cggccagggt
     2461 gtcggcgcaa acttatgacg ggacaagagg ccctcggcca gcccgcaatc aattccaatg
     2521 cgcggcgctg ttcgtcatca atcatagcac cgagaacctt cactgcgcga ttacggtagc
     2581 ggggtaaacg gccgtagctg ggctcatgtc gcagaggtta tcttgtgcga catgtgagga
     2641 ttggctctgt tgagccattc cctgctttgg ctgcaaagga caaatgatga gcgccgacgg
     2701 cattgaggta cgccgcctca tacaagagga tccaaccgat gccgtcctgt atcggggcat
     2761 tcggctggag gctctccaag ctaacccgga agcgttcggt agcactttcg aggttgaaaa
     2821 tttacagcct ctgagttggt tctcggatcg actcagcagt tctacagtgc tgggcgcgtt
     2881 ccgcgacaca gagttggttg gcattgccgg cttcgctgtc caacagggcc agaaagaagc
     2941 tcacaaaggt atactttggg gcatgtacgt tcgacccgcc gcaaggaatg ccaaggtcgg
     3001 tcgacggctg gtcgaagcgg tatgcaatca cgctcgtcaa caggttgagc tgatccagct
     3061 cagcgtggtg gtggaaaatg aacgggcgcg gagtctttac gcgagattgg gcttcctgga
     3121 gtacggcgtg gagaagaacg ctctgaagca agctggccgc tactgcgact tggttcttat
     3181 ggcaaaggat ctctctcgcg g
//
LOCUS       DATILV010000854         1893 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4050310, whole genome shotgun sequence.
ACCESSION   DATILV010000854 DATILV010000000
VERSION     DATILV010000854.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1893)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1893)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1893
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4050310"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..215)
                     /locus_tag="VLJ17_20640"
     CDS             complement(<1..215)
                     /locus_tag="VLJ17_20640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25422.1"
                     /translation="MPVQRFAPMTKDFPTFDCDAHVTEPPLIWERAKDFLTRDELDAL
                     KRTIWWDADGQLLIVNGRAGVGLGSPR"
     gene            complement(250..528)
                     /locus_tag="VLJ17_20645"
     CDS             complement(250..528)
                     /locus_tag="VLJ17_20645"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HSV25423.1"
                     /translation="MTSCSGLFDFAAVDELKRLAAKYGKHLPQFALRWTSSNPVVHTA
                     LVGFPTPAEAIENLDALGWEISNADMAEIDVIFDRHGAITLPPGWLED"
     gene            complement(537..>1893)
                     /locus_tag="VLJ17_20650"
     CDS             complement(537..>1893)
                     /locus_tag="VLJ17_20650"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF012946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSV25424.1"
                     /translation="DRFDLRRDIEFNTRVKEAAFDSKTNTWTVKTDKGCDVTARFCIM
                     ATGNLSTPRTPSLPGLAGFKGKWYHTGLWPHEGVDFTGLRVGVIGTGSSGVQSIPIIA
                     KQAKDLYVFQRTANFSLPARNAPMDPAKERSHKAHYPERRRAAFDTPFGIAGYPPPVK
                     SALDATEEELLLAYEAKWAEGGSISYLYSFTDLLINKQSNETASEFVRRKIRATVKDP
                     KTAELLCPNDHPIGTKRLILDTDYYETYNRDNVTLVDIRRKPIKEITPTGLRTADGDY
                     ALDAIVFATGFDAMTGAMKEIDIYTDAGMSVREKWEDGPCTYLGIMIAGFPNLFMITG
                     PQSPGVKSQMILACEQHVDWIADCVQYLRDHRFSRIEAEQDAEDAWVQHNNEVADRTL
                     YPMANSWYVGANIPGKPRVFMPYVGGVSAYKKKCDEIAARGYEGFRLAASVEEQRFAA
                     D"
BASE COUNT          373 a          553 c          546 g          421 t
ORIGIN      
        1 tggcgcggcg agccgagccc gacaccggcg cgaccattga cgatcaaaag ctggccgtcg
       61 gcatcccacc agatcgtccg cttcagcgcg tcgagctcgt cccgggtcaa gaagtctttc
      121 gcgcgctccc agatcagcgg cggctcggtg acatgcgcgt cgcagtcgaa cgttgggaaa
      181 tccttggtca tcggcgcgaa gcgttgaacc ggcatgatgc ttctcctcac ccaatggtga
      241 cgcagtacgc taatcttcga gccagccggg cggcaacgta atagcgccgt gacggtcgaa
      301 gatgacgtcg atctctgcca tatcggcgtt gctgatttcc cagccgaggg cgtccaggtt
      361 ctcgatagcc tcagccggcg tggggaaccc gaccagtgcg gtgtggacaa ccgggttgct
      421 cgaggtccag cgcagcgcga attgcggcag atgcttgccg tatttggcgg ccagccgctt
      481 caactcatcc accgcagcga agtcaaacaa gcccgagcaa gacgtcatcg gtatcgtcaa
      541 tctgccgcaa accgctgctc ttcaacggaa gcagccaagc gaaagccttc gtagcctctg
      601 gcagcgatct catcgcattt cttcttgtat gcggagacgc cgccgacata cggcatgaat
      661 acacggggtt tccccgggat gttggcgccg acataccatg agttcgccat tggataaagc
      721 gtacgatccg cgacctcgtt gttgtgctgc acccaagcat cctcggcatc ctgctccgcc
      781 tcgatgcgcg agaaccgatg atcgcgcagg tactgcacgc agtccgcgat ccaatcgacg
      841 tgctgctcgc aagccaatat catctgactt ttgacgccag ggctctgcgg gccagtgatc
      901 ataaatagat ttgggaaccc ggcgatcatg atcccgaggt aggtgcacgg accgtcttcc
      961 cacttctctc gaaccgacat tcctgcatcc gtgtaaatgt cgatctcttt cattgccccc
     1021 gtcatggcat caaagccggt tgcaaaaacg attgcatcaa gggcgtagtc accatcggcg
     1081 gtgcgcaagc cggtgggcgt aatttctttg atcggcttgc gtcggatatc caccaatgtg
     1141 acgttgtccc gattgtaagt ctcatagtag tcggtatcga gaatgagccg tttggtgccg
     1201 attggatggt cattggggca taataactcc gccgtcttgg gatccttgac ggtggcgcgg
     1261 attttgcggc gcacgaactc tgatgctgtt tcgttggact gtttgttgat cagcagatct
     1321 gtaaatgaat acaggtagct gatgcttcca ccctcggccc atttcgcctc gtaggcgagt
     1381 agcagttcct cctcggttgc atcgagcgca gacttcaccg gcggcgggta cccggcgatc
     1441 ccgaaaggcg tatcaaatgc ggcgcggcgg cgctctggat agtgtgcttt gtgagatcgc
     1501 tctttcgcgg gatccattgg cgcgttgcgt gccggtaagc tgaaattggc ggttcgctgg
     1561 aacacataaa gatccttcgc ctgcttggcg atgatgggta tcgactggac acccgaagag
     1621 ccggtcccaa tgacgcctac gcgcaatccc gtgaagtcga ccccttcatg gggccatagg
     1681 ccagtgtgat accacttccc cttgaaaccc gccaaaccag ggaggctcgg cgtccgaggt
     1741 gtcgaaagat tgccggtcgc catgatgcag aagcgtgcgg tcacgtcaca gcctttgtca
     1801 gtctttactg tccacgtatt tgtcttgctg tcgaacgctg cctctttgac ccgggtgttg
     1861 aactcgatgt cacgcctgag gtcgaagcgg tca
//
LOCUS       DATILV010000855         6914 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3529773, whole genome shotgun sequence.
ACCESSION   DATILV010000855 DATILV010000000
VERSION     DATILV010000855.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6914)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6914)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6914
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3529773"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..492
                     /locus_tag="VLJ17_20655"
     CDS             <1..492
                     /locus_tag="VLJ17_20655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007791110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HipA domain-containing protein"
                     /protein_id="HSV25425.1"
                     /translation="DSVQFREKRSYVLLVEELRRVSAEPKKDAAELFRRMCFSALISN
                     TDDHPRNHAIIAKAQDWKLSPAYDLVPMPQPSVERRDLAMICGDQGRVANAANLLSQT
                     ARFLLSDDEANSIVDAMKERVKGTWYEVARSVGVSEKDCERIEGAFAYPGFDLEQVQP
                     AGN"
     gene            complement(864..1490)
                     /locus_tag="VLJ17_20660"
     CDS             complement(864..1490)
                     /locus_tag="VLJ17_20660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Isoquinoline 1-oxidoreductase subunit"
                     /protein_id="HSV25426.1"
                     /translation="MRTGPTVLFVFAVATLGAPPAYRAAAQTPSQIRAPASFSDIADR
                     DARSRAMFSEVAKVLTGPRCMNCHPIGDHPLQGDDHRIHQPAAARGPNDTGVPGLPCA
                     SCHTDRNFTLPDGEASYQSIPGHPRWGLAPTEMAWEGKSVGEICRQIKDPARNGGRNL
                     SLLHDHVASDDLVGWAWQPGTGRQPAPGTQKQLGDLVQAWIDSGAACP"
     gene            complement(2216..4279)
                     /locus_tag="VLJ17_20665"
     CDS             complement(2216..4279)
                     /locus_tag="VLJ17_20665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014990263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PBP1A family penicillin-binding protein"
                     /protein_id="HSV25427.1"
                     /translation="MLGSLITAGTVLWALHDLPAEKPIGGNTESSLLLEAANGETLGR
                     VGPLKMADAARTDFSDDLVNAVISVEDRRFYSHPGFDPEGIVRALRRNIAAGTIVEGG
                     STITQQLVKMRILGHERTLSHKLREALAAVWLDMQLGKDEILTRYLNSVYLGNGAYGM
                     TAAARLYFDKRPSELTLPEAAMLAGLIRSPSRDNPWQNLQGARARTAVVIDAMRDNGV
                     IDAKAAENAKAQPAILHPSGQTLRAGTWFADWVAREAAENIGSGNKRLRTTLVPGLQK
                     LAEQAIDDILTRQGAERHVSQAALVAMRPDGAVIAMVGGRDYQVSQFNRAVDAQRQPG
                     SAFKLFVYFAALRKGFKLDDTIDAGPLDIKGWSPENYGDRHYGRVTLAEAFAKSINTA
                     AARLAQQVGLNQVIAAARDLGVTDALPAVPSLALGAAEVSLLELTAAYASVQAGKMPI
                     RPWGIAGFGIEGQPRLQSMGPPIGGTQSMQPYQKPLLELMQDVLLHGTGREAALDGFA
                     AGKTGTSQNYRDAWFIGFNDTLIAGVWVGNDDRTPMNRVTGGSLPAAIWKRFMTGAAT
                     AMTQDTPQPAAEVPAQPSADQTAEAPHCDYLACARTYQSFRPSDCTYQPYSGASRRLC
                     DKNMPQQTAATPFAPNLDSQPPSDKPGKAQCNINVCASFYDSFDPADCTYKPYGGGAR
                     RLCTR"
     gene            5236..5679
                     /locus_tag="VLJ17_20670"
     CDS             5236..5679
                     /locus_tag="VLJ17_20670"
                     /inference="COORDINATES: protein motif:HMM:NF024245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HSV25428.1"
                     /translation="MSPEKFDLNIASVHHLKSIKGIGQGRAEAIVRYRDKNGPFASVD
                     DLAKVPHVGDMPPRELDQAKQHLMVQSDARAPEHKDAQKIDVNQANVAELRQVSGIGE
                     AHAQAIVAYREEHGKIEDLSAIDQLPYFRDQSELERQRIKKSLKV"
BASE COUNT         1400 a         2036 c         2091 g         1387 t
ORIGIN      
        1 gattccgtcc agttcaggga aaagcggtcc tacgttctgc tcgtcgaaga gctgcgtcgg
       61 gtgagcgccg agccgaaaaa ggacgccgca gagctgtttc gtcgcatgtg cttcagcgcg
      121 ctcatctcca acaccgacga ccatccgcgc aatcacgcca ttattgcaaa ggcgcaggat
      181 tggaaactct cgcctgccta tgatcttgtg cccatgccgc aacccagcgt cgaacgcagg
      241 gatctcgcca tgatctgcgg cgatcagggc cgcgttgcga acgcagccaa tctgctttca
      301 cagactgccc ggttcttgtt gtctgacgac gaggcaaaca gcattgtcga tgcgatgaag
      361 gaacgtgtga agggcacctg gtacgaggtc gcccggagcg ttggcgtttc ggaaaaggat
      421 tgtgaacgca tcgagggcgc gttcgcctat ccgggctttg accttgagca ggtccagccg
      481 gcgggtaatt gatcgatgga tgcaaatttg taattcaacg tctggcttgg cgaacggaat
      541 tcaaaagcgc tgttgatcat cttattcaca ataccttccg tctgccgctg actacaacgc
      601 ggccgaggaa gcgttgtcgc gcgtctatga acgatgttcg cagccgggca gttgggaaag
      661 ggaagcaatg cttgcgaaac cgagggcggc cgaactggca caacaacacg ctgaaaaagc
      721 accaattgtt cgtcgctttg tctttagagt ctgtccggaa agttcatgcg ggattgcatc
      781 aaggctttgc agcctcaact ccgaatgatc agcctgacgt cggcgctaaa cccaatcaga
      841 accgtcagcg ctggtctgat agttcacgga cacgcggcgc cggaatcgat ccatgcttgc
      901 acgagatcgc cgagttgctt ctgagttccc ggcgcaggtt gccgtccggt gccgggctgc
      961 cacgcccatc ccaccaggtc gtcgcttgcg acatggtcat gcaatagaga aagatttcgg
     1021 ccaccgttac gcgccggatc cttgatctgc cgacagattt cgccgactga tttgccttcc
     1081 cacgccatct ctgttggagc aagcccccag cgcggatggc ccggtatgct ttgataactc
     1141 gcttccccgt ccggcagggt aaagtttcga tcagtatggc acgaagcgca aggcagcccg
     1201 ggcacgccag tatcattggg gccacgtgca gccgccggct gatgaatgcg atggtcatcg
     1261 ccttgtagcg gatggtcgcc gattggatga cagttcatgc agcgcggccc ggtaaggact
     1321 tttgcgactt cggaaaacat tgcccgcgag cgcgcgtcgc gatccgcaat gtccgagaac
     1381 gatgcggggg cgcgtatttg gcttggggtc tgcgccgccg cacgataagc tggcggcgcg
     1441 cctaacgtcg cgacagcaaa cacaaacaac accgtcggac ccgtccgcat tgttcgctcc
     1501 gtcggtcagc cccccgatgg gcaacgtcaa aacggacgaa atgtttcgtc agctcgacac
     1561 ctgaaggtct caaaacacgg aaacattcgc tgggcggacg ccccgcccgg cgagactaac
     1621 ccctgctgcc gtcctgaaaa tcgcggtttc tgcgatacgc ccgattcggc ctgcttggcg
     1681 tataggggcc acccttcgta ggctcgaggc gcatagcata agtgtagcgt ccgtatggat
     1741 aaccggctca taggcgtagc tgtgatcgta cccgtagccc ttcgcgtagt tgccgtggta
     1801 gctgggagcc cacaggggga gaggtcgctg ccgctacggc gccgccgacc accgcggcaa
     1861 gcccgggcga caatgttgcg cggcggcggt cccgccggtc cccagaactg ccaaaccaaa
     1921 cgccgcttcc gctccgaatg ggcggcaaac tagcgcgcta cgccggcgcc gagtgagtga
     1981 acggaggccc ataggcgggt gctatcggcg gcacccaaat caaacttggg ccccggtccc
     2041 cctttctggg ggctagcgag tagggaccgg ggccacgcac gggggtaggc acccgcgcgt
     2101 taactcaacg caaagtgtcg tgatgtgttc ctgtagaccc gttatttatt tgtccgtgcg
     2161 acgagccggt gcttgtcgaa tagcgagaac gtctacggac agcccgaccg ggaagctatc
     2221 tcgtgcagag cctgcgcgcg ccgccgccgt agggcttata cgtgcagtct gcaggatcga
     2281 acgagtcgta gaaactggcg cagacattaa tgttgcattg cgccttgcct ggcttgtccg
     2341 acggtggttg tgaatccaaa tttggagcaa acggcgtagc agcagtctgc tgtggcatgt
     2401 tcttgtcgca caaccggcgc gaggcgccgc tatagggttg gtaggtgcaa tccgatgggc
     2461 ggaaagactg ataggttcga gcgcaagcca gatagtcgca gtgaggcgct tcggcagttt
     2521 gatcggccga tggttgcgcg ggaacttccg ccgcgggctg cggcgtatcc tgtgtcatgg
     2581 cggtcgcagc tccggtcata aagcgcttcc agattgccgc aggtagagaa ccgccagtga
     2641 cgcgattcat cggggtgcga tcatcattgc cgacccagac gccagcgatc agtgtgtcgt
     2701 tgaagccgat aaaccaagcg tcgcgataat tctgactggt gccggtctta ccggcggcaa
     2761 agccgtcgag tgcggcttca cgccctgtgc cgtggagcaa cacgtcctgc atcaattcga
     2821 gcaagggctt ctgatagggc tgcatggact gcgttccgcc gatgggtgga cccatagatt
     2881 ggagacgcgg ctgcccctcg ataccgaatc ccgcaatgcc ccagggcctg ataggcatct
     2941 tgcccgcttg cacagaagca taagctgcgg tgagctcgag tagactcact tcggctgcgc
     3001 ccaaagccaa gctcgggact gcggggagtg catcagtgac gccaaggtcg cgggcagcgg
     3061 cgatgacttg attcaatccc acctgctgag cgagccgagc ggcagccgtg ttaatggatt
     3121 tggcgaatgc ctcagcgagt gtcacgcgac catagtggcg gtcaccgtaa ttctcagggc
     3181 tccaaccctt gatatcgagg ggaccggcgt cgatagtatc gtcgagctta aatcccttgc
     3241 gtagagcggc gaagtagacg aacagcttga aagccgagcc gggctgccgc tgggcatcga
     3301 ctgcgcggtt gaactggctt acttggtagt cgcgcccgcc taccattgcg ataactgcgc
     3361 cgtcgggccg catggcgacg agggccgcct gggagacatg gcgttcggcg ccctgtctgg
     3421 tgaggatatc gtcgatagcc tgctcggcca gcttttgcag tcctgggact agcgtcgtgc
     3481 gcagccgctt gtttcccgag ccgatgttct cagcggcctc tctggcgacc caatcggcaa
     3541 accacgtgcc cgctcgcaat gtctgacctg aaggatgcag gattgcaggc tgggccttgg
     3601 cgttctcggc cgctttcgcg tcgatcacgc cgttgtcgcg catggcatca ataaccaccg
     3661 cggtccgcgc ccgcgcgcct tgtaggttct gccacggatt gtcgcgcgag ggggaccgga
     3721 tcaggccggc caacatcgcc gcttcgggaa gcgtcagctc agacgggcgc ttgtcgaaat
     3781 acagccgggc agccgcagtc atgccatacg cgccgtttcc aaggtagacg ctgttgaggt
     3841 agcgcgtgag aatctcatcc ttgccgagtt gcatgtcgag ccacaccgcc gccagcgcct
     3901 cgcggagctt gtgtgacaag gtgcgctcat gaccgaggat ccgcattttc acaagctgct
     3961 gcgtaatcgt gctgccgcct tcgacgatcg tcccggcggc tatattccgg cggagcgccc
     4021 taacgatgcc ttctgggtcg aagcctggat ggctgtagaa gcgccgatcc tcgacgctga
     4081 tcacggcatt cactaggtcg tcagaaaaat cagttcgcgc ggcatcggcc atcttaagcg
     4141 ggcctacccg cccgagcgtt tcaccattcg ccgcttcaag gaggagtgac gactcagtgt
     4201 tgccgccaat gggcttctcc gccggaagat cgtgaagcgc ccaaagtacc gtaccggccg
     4261 ttatcagcga gccaagcaca gtaagaagga cgatcgcctt tgcgagccca acgatgacgc
     4321 gccggaatgc gctggaccgc tttgggctga tggttggaga cgtttgcgcc tttcttttgt
     4381 ctgatgacca aagagcgcgg cccaagcggt gcaagaacgc ccctagatcg acgagaagcg
     4441 cgtggagaaa cgctcgtccc gccgccaggc tccggccttc tatctcagat ggcggagtgc
     4501 gagatggcgc acggccggcc tcgtcaggac gtggagattc gctaagtgtt ttcgacatcg
     4561 agcaaaaccg aatcaaaaac gtgatcgcag tccacgctga accatgaagc tatgctgtaa
     4621 acggcgataa gcgcatatgg ttgcaggcag tcgcaagctt gaagcgtggt atttcattgg
     4681 cggttggaac tgcgcgctac acatctgcgt tcgttgaaag cgatcgcaac ggcgtccctc
     4741 atgacagggc cgggccttgt aggcgacatt ccgaacttgc acgttccacc ggacggtggt
     4801 gctggatgcc gatgtgatcg atgcggccgt cgccctcagc agggacaagc ccactcgctg
     4861 tcttatccga gtggcaccgc aatggtgatc catagcggta aagacgatta ctcaacagat
     4921 tccgcccgaa aacgctggca gccgcaccgg ccgcgggacg atcagcgagg aacccgcgac
     4981 ggtcggtcgc cacaatcacc acggtaggtt agtcacatgc aacccggaga aagcagcggc
     5041 aaattgcgag acctgcggtg gcatggcgcc acgttctcgc cagaatgggc attttcccgc
     5101 gtagctacgc cgttttcgta gacggcgcta gcatggcact cgcgctcact cggcggaaac
     5161 gaacgttccc gcgaagtccg accttgccga acgtgaactc cggccactcg acaccacaag
     5221 tcggaggtcg tcatcatgag cccagaaaag ttcgacctga atatcgcaag tgtccaccat
     5281 ctaaagtcca tcaagggaat cggccaaggt cgcgctgaag ccatcgtgcg ataccgcgac
     5341 aagaacggtc cgttcgcgag tgtcgatgat cttgcaaaag tgccgcatgt cggcgacatg
     5401 cccccgcgag agcttgatca agcgaagcag catctgatgg ttcagtcgga cgcgcgtgcg
     5461 cccgaacaca aggacgctca gaaaatcgat gtcaatcagg caaacgtggc cgagctccgc
     5521 caggtttccg gaataggcga ggctcatgcg caggccattg tggcgtaccg ggaagaacac
     5581 ggcaagatcg aggatctgag tgcgatcgat cagttgccgt actttcgaga ccaatcagaa
     5641 ttggaacgcc agcgaatcaa gaaatccctg aaagtgtgat gccccctcct cacacgttct
     5701 cccgcccacc tccgaaaatc aatttgagta cgagttgaca gctgggttct agtcgatgtg
     5761 attccatcat tgatgtcgcc gcgctgacat tcagtttctg tctcaatcac gttccgtctc
     5821 ccgcgaactt gatgcgcgcc ttgcccgtcg gtttgaaatg gtgcagtttc ctggcgacct
     5881 tgaattttcg ccgtcactga gaggcagctc acatgaatag ccgtatttgc gcggccatcc
     5941 gcgcgcgctc ttgtcgtcgc aatcggttcc gcttcagcgt tctcacgcgg tgctgatcat
     6001 cgcgccgcgc gcgcccgctg taacgaaggt tcactacgtg gctcttccac cagctttaga
     6061 ccggcgccgg tcaaataaat cggtctttcc gtcgtgacga tctacacagc tcagatgccg
     6121 ggccgtgctt ttatcgcctt gaccctcacg cgagagcact gtttcaaatc attgcacaat
     6181 gatcgtcagc gaacctggag gaggggccgg cagtgggaat gcacgaccca aagcgcgacg
     6241 ggggcttcct cgggatcttg aaagggcaga ccttcccagt gaacaacgcc tgttatccct
     6301 ctcaggagcg gcctcgcgct ctatgagatc aagacggcgg ccggcatcgc ggtcgattgg
     6361 gcccctcacc accatcgcag tcacagtctc accaggatgc cggcccctcc caatcgatgt
     6421 tgcttgcggc acagaacagc aagacgcgct cgcgaaccgt gaggtccgcg gccgtgtcag
     6481 actgatgctg ctgtttcatg gaagcggatg ttctgcctct agtgccgcca tcgtcgcgga
     6541 cagaaatcgg attgagagag cgacccgagt ggatggcgat tagccgctct gaatatcgat
     6601 tgcacgctgg ggcgctgccg cagcgacacc tgaacgccac ccaatttaag aagactggca
     6661 cgctcaatcg attgtgttgg aaccgctgca gagcgccggc gtttgttcca aggctcggcc
     6721 ttgaaaatag gcggtgcggg tgccgcattt gttctggcgt gtccggggcc tataactgag
     6781 gagatgaccg atgccgcgac tttcgataag tgggctgagc gtccttttgg ccttgggact
     6841 cgccctctgg gaatggtttt tctttttcta tgcggaaggt cgatccgggt ggtttgctcc
     6901 gagccgactg gggc
//
LOCUS       DATILV010000856         4806 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_5062696, whole genome shotgun sequence.
ACCESSION   DATILV010000856 DATILV010000000
VERSION     DATILV010000856.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4806
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5062696"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2243
                     /locus_tag="VLJ17_20675"
     CDS             <1..2243
                     /locus_tag="VLJ17_20675"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HSV25429.1"
                     /translation="LAAGQYREAVGREEEWLVERLTRHALPSNSFEQCLDQNRWVRVE
                     ERRTADGGSIGVRIDITELKRREESFRLLFDNNPVPMWVMDLDTLKFLAVNAAAVAHY
                     GYSHDAFLQMTAADLHSTDDRDILKDSIRVGGTAREDKIWHHRKADGTTILVSVYSEN
                     LTYAGRAARLCAALDVTERRRAEENLLEQKVRIDTCVNNMSQGLLMFDNQARLVLCNE
                     RYSEMYGLSADVVKQGCTLRQLLEHRQEVGAFTGDPEQYCRNILDSIAKGTTSSTIVE
                     LPDGRTVNCVNRPMVGGGWVATHEDITERKQAQARIEYLAHHDPLTDLPNRAAFNEFL
                     SKALEDAAQNAGKIAVVCIDLDRFKEVNDVFGHAVGDGLLRELSRRLKEAAQGAFLAR
                     LGGDEFSIVQTDESQPIAAEQLASRLQATTVEDILVDGHALRGGLSVGVAIYPQDGVA
                     AATLLANADAGLYRAKREGRGSVRFFEAQMDEQLRERRSLQHDLRSAIERKEFLLHYQ
                     PLASVDREIIGFEALARWRHPTRGMVSPGIFIPLAENSGTIIQIGEWILREACREAAS
                     WPRPLRVAVNLSPVQFQYGDLPALVHGALLESGLPPSRLELEITETVLVDDFSRAASI
                     LRRLKALGVRIAMDDFGTGYSSLSYLQAFPFDKIKIDQSFISNLDKNPQSAAIIRAVI
                     GLGRCLSLPVAAEGVETNEQLAFLAREACDEIQGYLIGRPCPIADYAEAVNQTRPRRQ
                     ELPLAI"
     gene            2506..3381
                     /locus_tag="VLJ17_20680"
     CDS             2506..3381
                     /locus_tag="VLJ17_20680"
                     /inference="COORDINATES: protein motif:HMM:NF024587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidylate kinase family protein"
                     /protein_id="HSV25430.1"
                     /translation="MTVIAMTRQLGCLGTEVANGVAGRLGLKIIHSEIVANNVAERLG
                     IGEGAVLRYVDGSASLFERWAIDKRRLSRYTTEEILSLAQQGDVLIRGWGAATLLRDM
                     PHVISVRVCASMNFRVRVMMERLGSKDSEAVRNELERFDAVHARTLRASFNVEQEDAL
                     LYHIVLNTDRLPVDACVNAVCQLAEHPHFRDPATTRTELADKLLEAKVNSALTEEISV
                     GIAPTGVTVSAANGRITLYGTSTSGALRGRAERVAHRVAGECQIDNRIVSVPSRGNGL
                     RVDASQRGESIRSRR"
     gene            complement(3421..3987)
                     /locus_tag="VLJ17_20685"
     CDS             complement(3421..3987)
                     /locus_tag="VLJ17_20685"
                     /inference="COORDINATES: protein motif:HMM:NF013767.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009927 - histidine phosphotransfer kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HSV25431.1"
                     /translation="MAESKHDKPGITKYADHDVIVVPNRLKKKALRRAAMNEPDPLTD
                     AERALDELSAQFGSWMEDEFRQLEEARQSVHLQGLTDVTRQALFRTAHDLKGHGTTFG
                     YPMVADVADSLCRVIEHTAEAAQIPLTFIDQCVDAIHAIIREHDIENAEEVAAELARE
                     LRVLTEELLGIDADPDDPVDIGPPLAPV"
     gene            complement(4008..4544)
                     /locus_tag="VLJ17_20690"
     CDS             complement(4008..4544)
                     /locus_tag="VLJ17_20690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008133731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV25432.1"
                     /translation="MVRIDFNRLRFLVIEDNAHMRRILRTLLYGFGTREVYEAEDGAA
                     GLEAFVHYVPDIVITDWAMPIFDGMELTQMIRQPGANANPYVPIIMLTGHSEKRRVIS
                     ARDAGVTEFLAKPISAKSLYQRILNIVINPRPFIKSKNYFGPDRRRNTNVNYTGPERR
                     KSNAEIIEQHPLLEKMKA"
BASE COUNT          995 a         1310 c         1451 g         1050 t
ORIGIN      
        1 gtcttgccgc tggtcagtac cgagaagctg tcggcaggga agaggaatgg ctcgtcgagc
       61 ggcttacacg ccacgcactg ccatcgaact catttgaaca gtgtttggat caaaatcgtt
      121 gggtgcgtgt cgaggagcgc cgaaccgctg acgggggaag cattggggtt cgcatcgata
      181 tcacggagct gaagcgacgc gaagaatcgt tccggctgtt gtttgataac aatccggtcc
      241 ccatgtgggt gatggatctc gatacgctaa aattcctggc cgtcaatgcc gcagccgttg
      301 cgcactatgg ctattcgcac gatgcatttt tgcagatgac tgcggccgat cttcattcca
      361 cagatgaccg cgacattctc aaggactcca tccgagtggg cggaacggcc cgagaggaca
      421 agatttggca tcatcggaaa gcggacggca ccaccattct ggtttctgtc tattccgaaa
      481 atctgacata tgcgggccgt gccgcacgtt tgtgcgcagc gctcgatgtt accgagcgta
      541 ggcgcgccga ggagaatctc cttgagcaga aggtgcgcat cgacacgtgc gtcaacaaca
      601 tgtctcaagg cctgttgatg ttcgataacc aggcacggct tgttctgtgc aatgagcgct
      661 acagcgaaat gtacggtttg tctgccgatg tggtgaagca gggctgcaca ctgcgtcagc
      721 ttctcgagca tcggcaggag gtcggcgcat ttacaggaga tcccgagcaa tattgccgca
      781 atattctcga cagcattgcc aaaggcacga cgtcgagcac cattgtcgag ctgccggacg
      841 ggcggaccgt taactgtgtg aatcggccga tggtgggcgg cgggtgggtg gccacccacg
      901 aagacatcac cgagcgtaag caggcgcagg ctcgcattga atatctggcg catcacgatc
      961 cattgaccga tttacccaac cgggctgcat tcaacgagtt cctgtccaaa gcccttgagg
     1021 acgccgccca gaatgccgga aaaattgctg tcgtctgcat cgaccttgac cggttcaagg
     1081 aggtcaacga tgttttcggc cacgcggtcg gcgatggtct gttgcgcgag ctatccaggc
     1141 gactgaagga ggcagctcaa ggcgccttcc tggcgcgatt aggcggcgat gaattcagta
     1201 tcgtgcagac ggatgagtct caacccatcg cggccgaaca gttggcctca cgactgcaag
     1261 cgaccacggt tgaagatatc ctggtggacg gccatgcgct ccgtggtggg ctgagcgttg
     1321 gcgtcgcaat atatccgcag gacggcgtgg ctgccgcaac gttgcttgcc aacgcggatg
     1381 ccgggctcta cagagcgaag cgcgagggac gcggctcggt tcgtttcttc gaagcgcaaa
     1441 tggacgaaca attgcgcgag cgccgatcgc tgcaacacga cctgagatcg gcgatcgaac
     1501 ggaaggagtt cctactgcac tatcaaccgc tggcctcggt agaccgcgaa atcattggat
     1561 ttgaagcgtt ggcgcgctgg cggcatccga cgcgcggcat ggtctcgccg ggcatattca
     1621 tcccgctggc ggaaaacagt ggaacgatca ttcaaatcgg cgaatggatt ttgcgggaag
     1681 catgtcggga ggcggcgtcc tggcctcgac cactccgggt cgcggtcaat ctgtccccgg
     1741 tgcagtttca atacggcgat ctgcctgcgt tagtccacgg cgcgttgttg gaatccggcc
     1801 ttccaccgtc tcgcctcgaa ctcgaaatca ctgagaccgt attggtcgac gatttttcac
     1861 gggccgcttc catcctgcgg cggctgaagg cgcttggtgt gcggattgct atggacgatt
     1921 tcggtaccgg atactcctcg ttgtcctatc ttcaggcgtt tccattcgat aagatcaaaa
     1981 tcgatcagtc attcatttcc aatttggaca aaaatccgca atcggcagcg attatccgcg
     2041 ccgttatagg tctcggacgc tgtctctcct tgccggtagc ggcggagggc gtcgaaacca
     2101 atgagcagct cgcatttttg gcgcgggaag cctgcgacga aattcaaggg tatttgattg
     2161 gtagaccgtg tccgattgcg gactacgctg aagcggtaaa ccagacaaga cctcggcggc
     2221 aggaattacc gcttgccatt taggtggtcg aatgcgcgta tggtcgagac ggccacgagc
     2281 catggcaatt tgacgcggag tgccgcgata cctgagagaa tgtgcataaa tgattgaaat
     2341 gtatgttatt tttcatctga cacccctgca tgcttagccc tgtagggcag ggcctgaaga
     2401 aaattcgatt tcccgcaagt taatttatga tactgtgttt acgcaaaagt tattcagctc
     2461 tagatagtat ttattcgaac ttcgccagcg ggtcaggcat tccttatgac cgttatcgca
     2521 atgactcggc aactcggctg cctcggaacc gaagtggcaa acggggtagc tggccgcctg
     2581 ggattgaaaa tcattcattc cgagatcgtg gccaacaatg tcgcggagcg gctcgggata
     2641 ggggagggcg ctgtactgcg ttatgtggat ggctcggctt ctctgttcga gcggtgggcg
     2701 atcgataagc gtagactgtc ccggtacacg accgaagaga ttttgagcct agcccagcag
     2761 ggcgacgtac ttattcgggg atggggtgcc gcgacgttgc tgcgcgacat gccgcacgtc
     2821 atcagcgtac gggtctgcgc atcgatgaat ttccgcgttc gcgtcatgat ggagcggctc
     2881 ggcagcaaag attccgaggc ggtgcgcaat gagttggagc ggtttgacgc cgtccacgcg
     2941 cgcaccctgc gggcatcatt caacgtcgag caggaagacg cgctccttta tcacattgtt
     3001 ctcaacaccg accgcttgcc ggtcgatgcc tgcgtgaatg cggtgtgcca gcttgccgaa
     3061 cacccacact tccgcgatcc agcgacgaca cggacggagc ttgccgacaa gctgctggag
     3121 gccaaggtca actcggcgtt gaccgaagag atcagcgtcg gaattgcgcc gactggcgtc
     3181 acggtgtcgg ccgccaatgg ccggataacg ctctatggaa cttccacaag cggagcgtta
     3241 cgcgggcggg ccgagagggt agcgcatcgg gttgcggggg aatgccaaat tgacaaccgc
     3301 attgtcagcg ttccgagccg cggcaacgga cttcgtgtcg acgcctccca acgcggcgag
     3361 tcgattcgat cgagacggtg atctcgacga ccggctcgcg ggctgtcgcg ggaggacgac
     3421 ctacaccggc gccagcggtg ggccgatatc gaccggatcg tccggatcgg cgtcgatacc
     3481 aagcagctct tcggtgagca cgcgcagttc acgtgccaac tcggcggcca cctcctctgc
     3541 attttctatg tcgtgctcgc ggataattgc atggatcgcg tcgacgcatt ggtcaatgaa
     3601 cgtcaacgga atttgtgccg cctcggcggt gtgctcgatc acccggcaca ggctgtcggc
     3661 gacgtccgcc accatcggat agccgaacgt cgtcccgtgg cccttgaggt cgtgcgcggt
     3721 acgaaacagg gcttgccggg taacgtccgt caggccttgc agatggacgg attgccgcgc
     3781 ttcctcgagc tggcggaatt cgtcctccat ccaactgccg aactgcgccg acagctcgtc
     3841 cagcgctcgc tcggcgtcgg tgagcggatc gggctcattc atcgcggcgc gcctcagcgc
     3901 cttcttcttc agacgattgg gtaccacgat cacgtcgtga tcggcgtatt tggtgatgcc
     3961 cggtttgtcg tgcttgcttt cagccatgga attgctcgat cctgcggtca ggctttcatc
     4021 ttttccaaga gcggatgttg ttcgatgatc tccgcattgc tcttgcgtcg ttcagggccg
     4081 gtgtagttta cgttggtatt gcgtctgcga tccggaccaa aatagttttt cgatttgatg
     4141 aaaggacgtg gattgatcac gatattgagg atacgctgat agagcgattt ggcagagatc
     4201 ggctttgcca gaaactcggt gacgccggcg tcgcgcgccg aaatgacacg tcttttctcc
     4261 gaatgaccag tcagcatgat gataggcaca taaggattgg cgttggcacc cggttggcgg
     4321 atcatctgcg tcaattccat gccgtcgaag attggcatcg cccagtcggt gatgacgata
     4381 tccgggacgt agtgaacgaa tgcctccaag ccggcagcgc catcctcggc ttcataaact
     4441 tcccgcgtac caaatccata gagcagcgtt cgcaatatgc gacgcatgtg cgcattgtcc
     4501 tcgatgacga ggaagcgcaa acgattgaaa tcgatccgaa ccattgcggc tacgatgcct
     4561 aggattggcc cctcatggtt gcaaaacaaa gtaaatattc gtttaagcgg aacggtcctg
     4621 tcctgaagtc atgacaattg tcaggcatgg tgacggattt caccgcactc cctcggggcg
     4681 acgcagtctc accggacatt gttgccctga gacatgcgtg agagctggaa gtgcttcacg
     4741 cctacagtca gttggcgccc ggattgtgcg gcttcgatgt aagcgcgcgt aaaaaccagg
     4801 tcggcc
//
LOCUS       DATILV010000857         1552 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_463645, whole genome shotgun sequence.
ACCESSION   DATILV010000857 DATILV010000000
VERSION     DATILV010000857.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1552
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_463645"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..797)
                     /gene="gcvA"
                     /locus_tag="VLJ17_20695"
     CDS             complement(<1..797)
                     /gene="gcvA"
                     /locus_tag="VLJ17_20695"
                     /inference="COORDINATES: protein motif:HMM:NF008352.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GcvA"
                     /protein_id="HSV25433.1"
                     /translation="MANRLPPLNSLRAFEAVARHFSFTDAADELCVSTAAVSHQIRAL
                     EEHLGTALFHRSNRSLTLTPAGAILLPEIREAFVRLRNATAQLRRREVTGSLTIGVPP
                     SFAAKWLIPRLPRLREHCPEIEVRIACASELVDFGCQNVDVAIRYGRGQYPGLHSDLL
                     MTTEFFPVCSPALAGGNPGLLVPNDLRHFVLLHDEIPAKLPTLPSWQTWLNTVGARSV
                     DPSSGPRFDTSFLSLEMAIAGKGVALALSTLASQDLAERRLVRPFAR"
     gene            1140..>1552
                     /locus_tag="VLJ17_20700"
     CDS             1140..>1552
                     /locus_tag="VLJ17_20700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25434.1"
                     /translation="MKRSLSRTALLASVALGPLLFSQETMAQGAPGAGSFPGSFLVPG
                     TQTSFAIGGYVKLDYTYDFGAQQVNGSGTGVPALIQPFGPLDSGLLHIGGVTIPVLAD
                     GAHHIHGNSQFTAAESRFNIETRTPTSYGEIKTFI"
BASE COUNT          312 a          477 c          475 g          288 t
ORIGIN      
        1 cttcgcgcga acggccgcac gagacggcgc tcggcgagat cctgcgacgc caaggtgctc
       61 agagccaagg caacgccctt gccggcgatc gccatttcca gactgaggaa agaggtgtcg
      121 aagcgcggac cgctgctcgg atcgaccgac cgggcgccga ctgtgttcag ccaggtttgc
      181 cagctgggca gggtcggtaa tttcgccggg atctcgtcat ggagcaaaac gaaatgccgc
      241 aaatcgttcg gcactaaaag ccccgggttt ccgccggcaa gagctgggct gcataccggg
      301 aagaactcag tcgtcatcag cagatcggaa tgcaagccgg gatattggcc tcgcccgtag
      361 cggattgcca catcgacatt ctggcagccg aaatcgacca gctcgctcgc gcaggcgata
      421 cggacttcga tctcggggca atgttcccgc aaccgaggca ggcgcgggat cagccacttg
      481 gcagcgaagc tgggaggcac cccgatggtc agcgagcccg ttacctcgcg gcgccgcaat
      541 tgcgcggtcg cattgcgaag ccgcacgaaa gcctcgcgaa tctccggaag caggatcgct
      601 ccagccggcg tgagggtgag cgagcggttc gaacgatgga acaaagccgt tcccagatgc
      661 tcctcgaggg cacggatttg atggctgacc gcggccgtgg aaacgcaaag ctcgtccgcg
      721 gcgtcggtga agctgaagtg gcgcgccacg gcctcgaatg cccgcagcga attgagcggc
      781 ggcaatcgat tagccatgtc gatggcattt catgagctgg gacccctgga cagccactcc
      841 catttggcac ccagaccttt cccgatcccg gattattccc gacgctcgca ttaaatccgc
      901 gaacggtgac gggtccgctc agcctttcag cttcggtatt cgctccgtat gaagattgca
      961 gccgcggttc tgggttaaca cgcggcgaac tcgataaatt ccatcgctcc aggcaaattt
     1021 aatcgaaata gaaatttgcg cttgggtgtc cttcccggtg gccggacggc tttgctctga
     1081 ccagagggtg gatgagcgcc cgattccccc ggccgcaaca ggggaaccag tacatgaaaa
     1141 tgaaacgctc tttatcgcga accgctttgt tggcatcggt ggcgctcggc ccactgcttt
     1201 tttcgcagga gaccatggct cagggcgcgc ccggcgccgg ctcatttccg ggctcgttcc
     1261 tggtaccggg gacgcagacc tcgttcgcaa tcggcggcta tgtgaagctg gactacacct
     1321 atgatttcgg cgcccagcag gtgaacggct ccggaaccgg cgtgcccgcg ctcattcagc
     1381 cgttcggccc gctcgatagc gggctgcttc acatcggcgg cgtgaccatt ccggttttgg
     1441 cagatggggc acatcacatt cacggcaatt cgcagttcac cgcggcagaa tcgcggttca
     1501 atatcgagac ccgcaccccg acctcatatg gcgagatcaa gacgttcatc ga
//
LOCUS       DATILV010000858         3913 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4815040, whole genome shotgun sequence.
ACCESSION   DATILV010000858 DATILV010000000
VERSION     DATILV010000858.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3913)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3913)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3913
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4815040"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1423
                     /locus_tag="VLJ17_20705"
     CDS             <1..1423
                     /locus_tag="VLJ17_20705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018644230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HSV25435.1"
                     /translation="SVKVPDPKFSSQTKDKLVSSEVRPVVESIINEALAAWFEEHPSE
                     AKTIVGKVIQAAAAREAARKAREMTRKSALGVASLPGKLADCQERDPAKSELFIVEGD
                     SAGGSAKQGRNREFQAVLPLRGKILNVERVRMDKMLSSQEIGTLITALGAGISDEFNA
                     DKLRYHKIIIMTDADVDGAHIRTLLLTFFYRQMREIIDRGHLFIAQPPLYKVTRGKSE
                     QYLKDERALEDYLITGGLEEAVLRQANGSERAGEDLRRLVEEARMIRNVLAGLHSRYN
                     RQVIEQAAILGVLNSSIFGDPEKANAAAPYIARRLDALSEETERGWQGSFLEGEGFRF
                     ERTVRGVKDAAAIDHALLGSTEARKLDEFAPSLQENYPRSGVLRRKGEEIPIHGPVSL
                     FEAITAVGRKNISLQRYKGLGEMNPGQLWETTLDVNVRSLLQVKVKEADEADDIFTKL
                     MGDVVDPRREFIQENALTASVDV"
     gene            complement(1433..2113)
                     /locus_tag="VLJ17_20710"
     CDS             complement(1433..2113)
                     /locus_tag="VLJ17_20710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25436.1"
                     /translation="MSDNTSPLPKTDPLAFTFLIAMALAAAVVTGASLSGIATGAVQD
                     LLRTAGVGQDSKVRAEQRRQTLALEKIELLISRARADVALLNARVDDVEKLRQQAVSS
                     APSVENEFELAALRTSLDEHAEHNRSEFTAVNKRIDWLEKLVYSQDATNAVQPTAPGR
                     RQSARSGPGWFVRHAEKGVAVIAGKGGAIDVTPGFVVPNLGRVAAIRQEGGRWVVVMD
                     KGVTIRGR"
     gene            2298..3275
                     /locus_tag="VLJ17_20715"
     CDS             2298..3275
                     /locus_tag="VLJ17_20715"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV25437.1"
                     /translation="MKTLAHTIAAVALPVVLIAAHAEEVHDFPSRTIKLVVPAAPGGP
                     IDAVARILADGFKTVWPAPVVVENRAGAGTSTSAAFVATAPPDGYTLLVMPDSITINP
                     SLYPNVNPDPLKTFEPIVLIATATQLLVVRPDLGVADFNQFLDFARRKGTDVNMASAG
                     TATLSHLTQVLLEQRTSISTTHIPFKGAAPALTALLGAHVDAMWVMPAPAVPYLKSGK
                     LLAVAVTSAARDPNLPDVPTVEEFGIADFRVDNWQGLFAPAGTAKPIIEKIGRAVADV
                     VKTPEVKGRMAAIGFESRGDGPDAVVGIIRTSLPKWAEVIRRSGLKLAE"
     gene            3415..>3913
                     /locus_tag="VLJ17_20720"
     CDS             3415..>3913
                     /locus_tag="VLJ17_20720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HSV25438.1"
                     /translation="MMQRKRFRVDRYRVDQSRPIVAPPVVPDADADAIQRHHELILEI
                     RALRSAIEPREDDARRIIETYQLQIGEIQKLKQELDLIQTAIDDTKQQIATLHVTGFQ
                     GPEMRRVTDELDAIVDGTESATDNILNAAEGIDQCANTLSAMVKTEQELNLARDIRDR
                     TVQIFE"
BASE COUNT          808 a         1214 c         1149 g          742 t
ORIGIN      
        1 gtccgtcaag gtaccggacc cgaagttttc ctcacagacc aaggacaagc tggtttcctc
       61 cgaggtgcgt ccagtggtcg agagcatcat caacgaagcg ctggcggctt ggttcgagga
      121 acatccgagc gaagcaaaga caatcgtcgg caaggtgatc caggcggccg cggcccgcga
      181 ggcggcccgc aaggcgcgcg agatgacccg caagtccgcg ctcggcgtcg cgtcgctacc
      241 cggcaagctc gcggactgcc aggagcgcga cccggcgaaa tccgagctgt tcatcgtcga
      301 gggcgatagc gccggtggca gcgccaaaca gggccgcaat cgcgagttcc aggccgtatt
      361 gccattgcgc ggcaagatct tgaacgtcga acgtgtccgc atggacaaaa tgctctcaag
      421 ccaggaaatc ggcacgctga tcacggcgct cggcgccggc atcagtgacg aattcaacgc
      481 cgacaagctg cgctaccaca agatcatcat catgaccgac gccgacgtgg acggcgctca
      541 catccgcacc ttgctgctca cgttcttcta tcgccagatg cgcgagatta ttgaccgcgg
      601 tcatctcttt atcgcccagc cgccgctcta caaggtgacg cgtggcaagt ccgagcagta
      661 tctcaaggac gagcgcgcct tagaggacta tctcattact ggcggcctcg aagaggccgt
      721 gttgcgtcaa gccaacggca gcgaacgggc cggcgaagac ctacgccggc ttgtcgagga
      781 ggcgcggatg atccgcaacg tgcttgccgg gctgcacagc cgctacaatc gccaagtaat
      841 cgagcaggcc gccatactcg gcgtactcaa ttccagcatt ttcggcgatc ccgaaaaagc
      901 gaatgcggcc gcaccctata tcgcgcggcg gcttgatgca ctttccgagg aaactgagcg
      961 cggctggcaa ggctcgttcc ttgagggcga gggctttcgt ttcgagcgca ctgtccgcgg
     1021 cgtcaaggac gccgccgcga tcgaccatgc actgctcggt tcgacggagg cccgcaagct
     1081 ggacgaattc gcgccgtcgc ttcaggagaa ctatccgcgc agcggcgtgc tgcgtcgcaa
     1141 aggcgaggaa atcccgatcc atggccctgt cagcctgttt gaagcaatca ccgccgtggg
     1201 ccgcaagaac atatcgctgc agcgctataa gggcctcggc gagatgaacc ccggccaatt
     1261 gtgggaaacc acactcgatg tcaatgtgcg ctcgctcctg caggtaaagg tcaaggaggc
     1321 cgacgaggcc gacgacatct tcaccaagct gatgggcgac gtggtcgacc cgcggcgcga
     1381 attcatccag gagaatgcgc tgacggccag cgttgatgtg tgacggcgtc tttcaccgcc
     1441 cccggatcgt cacaccctta tccatcacca ccacccagcg cccgccctct tggcgaattg
     1501 cggcgacgcg gccgaggttc gggaccacga atccaggcgt gacgtcgatc gcgcccccct
     1561 tgccggcgat cacggcgacg cctttctcgg catgccgtac aaaccaacca ggccccgatc
     1621 gcgcgctttg gcgtcgccct ggcgcagttg gttggaccgc gttggtggca tcctggctgt
     1681 agacgagctt ctcgagccaa tcgatccgct tgttgacggc ggtgaattcg ctgcggttgt
     1741 gttccgcgtg ctcatcgagc gatgtccgaa gcgcggcaag ttcgaattcg ttctcgacgc
     1801 tcggagctga actaacagct tgctgacgca gcttttcgac gtcgtcgacg cgcgcattca
     1861 gcagcgcgac gtcggcgcgt gcacggctga tcaacagttc gattttttca agcgctaagg
     1921 tctgacggcg ttgttccgcc ctgaccttgc tgtcctgtcc gaccccggca gtgcgcagca
     1981 gatcctgcac ggcgcccgtc gcgatcccgc tgagagaagc gcctgtcacg accgcagcag
     2041 caagcgccat ggcaataagg aacgtgaaag ccagggggtc tgttttgggg agcggcgaag
     2101 tattatccga cattcgttga tgctcgcttg accatgcgaa gatacacctt agtaacccta
     2161 accactttcg gaattgctaa cgggacactt ccggatgtgg tcgatgattg aatttttctc
     2221 tggcgcgcac gcaatggcgt cacacccgcg taccgtgcta gcttagaccg cagcgccatc
     2281 atcgcaggaa cgttcacatg aagacgcttg cccacacgat tgccgcggtg gcactacccg
     2341 ttgtgctcat cgcggcgcat gccgaggaag tccatgactt tccgtctcgc accatcaagc
     2401 tggtggttcc ggcggcaccc ggcggaccga tcgatgcggt ggcgcgtatt ctggcggacg
     2461 gcttcaaaac cgtttggccg gcgccggtcg tagttgaaaa tcgggccggc gccggcacct
     2521 ccacgagcgc cgcgttcgtg gcgactgcgc caccggacgg ctatactctg ctggtaatgc
     2581 cggattcaat cacgatcaat ccgagcctat atccgaacgt caatcctgat cctctgaaaa
     2641 ccttcgagcc gatcgtactc atcgcgaccg cgactcagct tctcgtggtg cggcccgacc
     2701 tcggcgtcgc ggatttcaat caattccttg atttcgccag acgcaagggc actgatgtca
     2761 acatggcatc cgccggtacc gcgacgttga gccatctcac ccaagtcctg cttgagcaac
     2821 ggactagcat cagcaccacg catattccat tcaagggggc ggcccccgcc ctgacggcgc
     2881 tgcttggcgc ccatgtagac gccatgtggg tgatgccggc acccgccgta ccatatctca
     2941 aatccggcaa acttttggcc gtcgcggtga cgtcggcggc acgcgatccg aacctgccgg
     3001 atgttccgac cgtcgaagaa tttggcatcg cggatttccg tgtcgacaat tggcagggcc
     3061 tgttcgctcc cgccggaacc gcaaaaccaa tcatcgagaa gatcggccgt gccgtagcgg
     3121 atgtggtcaa gacgcccgag gtcaagggcc gcatggcagc gattggattc gaatctcgcg
     3181 gtgatggacc ggatgcggtc gtgggcatca ttcggaccag tctgccgaaa tgggccgagg
     3241 tcatccgtcg cagcgggcta aagttggccg agtaaagatc gccgtcaact aatctccgcc
     3301 ctttatgatt aatcggcaat taacccgtac ttttattatg acgtggcagt acgaataaac
     3361 tgggccttaa atttcacggt ttaaagcttt tcactgaccg acggatcagg tgggatgatg
     3421 cagcgcaagc ggtttcgcgt ggaccggtac cgggtggatc aatcgcggcc catagtcgcg
     3481 ccgcccgttg tgcccgatgc ggacgccgac gccatccagc gtcatcacga gttgatcctc
     3541 gaaatccgcg cactgcgttc cgcaatcgag ccgcgcgagg atgatgcccg acgcatcatt
     3601 gaaacctacc agttgcagat cggcgaaatc caaaagctga agcaggagct cgacctaatc
     3661 cagacagcca ttgacgacac caagcagcaa attgcgacgc tgcacgtgac aggcttccaa
     3721 ggcccggaaa tgcggcgcgt gactgacgaa cttgacgcaa ttgtcgacgg caccgaatcc
     3781 gctaccgaca acatcctcaa tgcagctgag gggatcgatc agtgtgccaa tacactgtcc
     3841 gccatggtca agaccgaaca ggaactgaac ctcgctcgcg atattcggga tcggaccgtg
     3901 cagatttttg aat
//
LOCUS       DATILV010000859         6522 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3531512, whole genome shotgun sequence.
ACCESSION   DATILV010000859 DATILV010000000
VERSION     DATILV010000859.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6522
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3531512"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(34..228)
                     /locus_tag="VLJ17_20725"
     CDS             complement(34..228)
                     /locus_tag="VLJ17_20725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25439.1"
                     /translation="MLLNLFAQDQNDAIEFAFTNSTSHFHAAEFGDTGAVLAIGCALL
                     VFAICVAILVYELRTPPTMS"
     gene            820..1152
                     /locus_tag="VLJ17_20730"
     CDS             820..1152
                     /locus_tag="VLJ17_20730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25440.1"
                     /translation="MNSAELVDAGKKYIETTAQMQQELIAKLNTMSLEWLARAQVEAD
                     LMSKLSAKLTAARTAPDVASAHSEWFAEWIKLCGENSRRLFLNNQELMKTATHVLSTD
                     WPKGGMGS"
     gene            1335..2027
                     /locus_tag="VLJ17_20735"
     CDS             1335..2027
                     /locus_tag="VLJ17_20735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013164986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSV25441.1"
                     /translation="MKAMDVMMTNVFTVGPDACVQDVAQILLANRISAVPVVGADGEL
                     LGIVSEGDLMRRAEAGTGKRRSWWLAMLTRKEVFAADYVKEHSRKVTDVMSHGVVTAT
                     PETPLDQIAELLEKNGIKRVPIVAGGKVVGIVSRANLLHALASLRKDAAPGAAPSDAV
                     IRRSVISRINAEPWTRPSLINVVVKDGVVDLWGIVDSNEERKAIRVAAEIAPGVRTVN
                     DNLMIQPPGSWS"
     gene            2436..2921
                     /locus_tag="VLJ17_20740"
     CDS             2436..2921
                     /locus_tag="VLJ17_20740"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family membrane protein"
                     /protein_id="HSV25442.1"
                     /translation="MTESTLERAYIVFFRLAMGWTFLYAASHQVFVPDWSAVGFLSHT
                     KTFHDLFAVFTTPTMAPITTFLVEYGHLLIGLSLLSGLMVRVSASFGILLMIVYWMAH
                     MDFPFIENKNNFLLDYHIVYAGVLGYLIAKRAGHVWGLDAWVEKLPLLAQHPRLRPLF
                     A"
     gene            3025..3444
                     /locus_tag="VLJ17_20745"
     CDS             3025..3444
                     /locus_tag="VLJ17_20745"
                     /inference="COORDINATES: protein motif:HMM:NF019262.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome domain-containing protein"
                     /protein_id="HSV25443.1"
                     /translation="MVDIRNRWGLAAAATALGLTALIGLELTPSASPLCAAEPPTSFS
                     EDVLPIFKGRCVGCHQPSVEGYEKSGLDLSSYEALMKGTKFGPVAVPKDPETSNLIWL
                     LDWRAAPELRMPHGKKKLSTCDRNAIRTWIREGAKNN"
     gene            complement(3457..3603)
                     /locus_tag="VLJ17_20750"
                     /pseudo
     CDS             complement(3457..3603)
                     /locus_tag="VLJ17_20750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032489531.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
     gene            complement(4263..5204)
                     /locus_tag="VLJ17_20755"
     CDS             complement(4263..5204)
                     /locus_tag="VLJ17_20755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25444.1"
                     /translation="MQINRLWTAMLTRESRDSGTDSSIHISVNTNGVEQLNHTFTDTQ
                     QSDQERGIANLYDVDVTDNGIQTEQLTDSSIRLGINGDDAWRPQHVFVFGEGVTRSGV
                     NETQAVAIETEIDTLSTDANEGPSSVPLHLVGHGSGTLAIRRLFILMRSRASDRPPED
                     GGIFATAVPHETVTDAPLEIQIVSQGRLVVLFQIRDTPQEDLEFGEANFYTMPVIVPF
                     TRAELESDAITLRIMGMDDYEPLSLFIFGADRAAGRPTSMVPLVSIPNWQQAGLGVID
                     YDPTNGTGSVTLPLAALPTNVQVVETPSPAARRSHRS"
     gene            5474..5911
                     /locus_tag="VLJ17_20760"
     CDS             5474..5911
                     /locus_tag="VLJ17_20760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005267 - potassium channel activity
                     [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium channel family protein"
                     /protein_id="HSV25445.1"
                     /translation="MLRQFLVGAAVSACDITIHALVMATVVQVARLTSAKSTSRPSLH
                     LIAVMIVTVSVLMAAHALEVVVWSLAYAMVDAAPADADLLYFAFVNYTTLGYGDVTPV
                     ERWRLLGPLTAMNGVLLFGWSTAVIFEVLRRAMDRGFEATMVE"
BASE COUNT         1276 a         1893 c         1988 g         1365 t
ORIGIN      
        1 cttcagagtt ttgagcatag acaccgcgcg tgcctaggac atcgtcggtg gcgtacgcag
       61 ctcgtagacc aaaatcgcga cgcaaatcgc aaagacgagc agagcgcatc cgattgccag
      121 caccgcgcct gtatcgccga actcggcagc atggaaatgc gacgtgctgt tcgtgaacgc
      181 gaactcgatc gcgtcgttct gatcctgcgc gaaaaggttg agcagcatgg ggtccggttg
      241 atagcgtgga tgccgggtcg ctgactagtg cggctcaacg cgcccgtacc gtcataccga
      301 ttgactggcg cgaacctacc cgctggtacc gtccacgcgt ctggggcggt gacctatagc
      361 attcggcgtg tgaattgaat cgattgtgat cggatcacgg ttcccttgat ggtgtggatg
      421 tgaatctatt ggacctgccg attccgggtg aagccgtccg tcgttccggg atgatgccgc
      481 ccaccgattc cgggatgatc tcgcccaccg ttccgggatg atctcgccca ccgttccgag
      541 atgatgtcgc ccaccattcc gggatgatct cgcccggggt cgggggcctc tgctggccga
      601 ctcaggtccg ctccttcggc tgttcaaagg agggaccgga tgccagcaga gagaacggcc
      661 atgcgccaag tgcgcgaagt tcctgccccg ttgatgaaaa tcaatgatgc cggccgccga
      721 tgtggctagc gtcgaacggc cgcatcattt ggaggtgtgt catggcgtcc ggaaaatcct
      781 caggcggaag cagacaaatc ggcatcggcg ataccgagca tgaattcggc agagttagtc
      841 gacgctggca agaaatacat cgaaaccacg gcccagatgc agcaagagct gatcgcgaag
      901 ctcaacacga tgagcctcga gtggctggca cgtgcccagg tggaggccga tctcatgtcg
      961 aaactgtcgg ccaagctgac agcggcgcgt acggcccctg atgtggcaag cgcacatagc
     1021 gagtggtttg ccgagtggat caagctgtgc ggcgagaaca gccgccgtct tttcctcaac
     1081 aaccaggaac tcatgaaaac cgcgacgcat gtgctgtcga ccgattggcc aaagggcggc
     1141 atgggcagtt gaaaatgagg tcgcgtcgaa cgctcggcac gagggcgacg aacggcgtgg
     1201 gacgaagtcc tccaggcttg cacggtcgat ccctgctcgc caacgcgcga tgcttgtcgc
     1261 ggccgttgag gtaggtcaat gaggatggcg gtggtttgag ccaatcttta tggcgaccag
     1321 caaggagcag aaacatgaaa gccatggacg tcatgatgac gaatgtattc accgtcggcc
     1381 ccgacgcgtg cgtgcaggat gtcgcccaaa tcctccttgc gaaccggatc agcgcggttc
     1441 ccgtcgtcgg ggccgacggc gaattgctcg ggatcgtaag cgaaggcgat ctgatgcggc
     1501 gggccgaggc cggcaccggc aaacggcgtt cttggtggct cgcgatgttg acccgcaagg
     1561 aggtctttgc cgccgactac gtcaaggaac attcgcgcaa ggtcaccgac gtcatgagcc
     1621 acggggtcgt gacggcgaca cccgaaacgc cgcttgacca aatcgcagag ctactggaga
     1681 aaaacggcat caaacgggtt ccgatcgtcg cgggcggcaa ggtcgtgggg atcgtcagcc
     1741 gggccaacct tctgcatgcg ctggcaagcc ttcgaaagga cgctgcgccg ggtgccgcgc
     1801 ccagcgacgc ggtcattcgc aggagcgtca tctcccggat caatgccgaa ccatggacga
     1861 ggccctcttt gatcaatgtg gtggtgaagg acggggtcgt cgatctctgg ggcatcgtcg
     1921 attcgaacga agagcgcaag gcgatccgtg tggcggcgga gatagcgccc ggcgtgcgaa
     1981 ccgtcaacga caacctgatg atccagccgc ccggatcgtg gagctgaccg attgatccgg
     2041 acgctgtcct tgctcaaaaa tgtatttgac gtgggaatcg gctgcagatg atcgcggctg
     2101 aattcatgga ccggtctgta cgtcgcggaa ctccacgacc ggcgtgaaat tcatggaact
     2161 tccggggcac ggtcgccgtg cgtgagcaca gcggttggaa atgcagcgat cgttcacgcc
     2221 gaaaccagcg cgtcgatgat tgtcgcgatg acttccagcc agcctcgcgg tcgcgcagcc
     2281 cacgccttct aaatgcgctt ttcctgctat ccgttcgatc ggtttgatct gtgtcaacgc
     2341 ctcccggcac aaagagagcg atgttcaatg acggaatggt caggaatgct tgctgacccg
     2401 ggcctcgata cgccatttgc gaaaggggaa atgccatgac cgaatccacg cttgaacgcg
     2461 cctatatcgt cttcttccgt ctcgcgatgg ggtggacgtt tctctatgcg gcctcacacc
     2521 aggtcttcgt tccggactgg agcgcggtgg gattcctcag ccacaccaag acattccacg
     2581 acctgttcgc ggtattcacg acgccgacca tggcgcccat caccacgttc ctcgtggaat
     2641 acggtcacct attgatcggg ctgtcgcttc tctccgggct gatggtccgc gtcagcgcga
     2701 gcttcggcat tctgctgatg atcgtgtact ggatggcgca tatggacttc ccgttcatcg
     2761 agaacaagaa caacttcctg ctcgattacc acatcgttta tgcgggcgtg ctcggctacc
     2821 taatcgcgaa gcgggcgggg cacgtctggg ggctcgacgc ctgggtcgag aagctgccgc
     2881 tcctcgccca gcacccgagg ctgcggccgc tgttcgcctg agcggcgcgc cggaggcgaa
     2941 gaagaggtcg gagagccgcg ccttatcggc atgttgccgg aggcgcggcg tggacatcaa
     3001 cagggatacg tccgggaggt actcatggtt gacatcagga acaggtgggg cctcgccgca
     3061 gcagccacag cgcttgggct taccgcgctc atcgggcttg aattgactcc ctcggcgagt
     3121 ccattgtgcg cggccgaacc gccaacgagc ttttctgaag atgtacttcc aattttcaag
     3181 ggcagatgcg tcggctgcca tcagcctagc gtcgagggat acgagaagag cgggctcgac
     3241 ctgtcttcat acgaagccct gatgaagggc accaagttcg ggcccgtggc cgttcccaag
     3301 gatccggaaa ccagcaactt aatatggctg ctcgattggc gagcggctcc ggagctgcgg
     3361 atgccgcacg gaaaaaagaa gctctccacg tgcgaccgca acgccattcg cacctggatt
     3421 cgagagggtg ccaaaaacaa ctagagcgga ttccggtcac gttcgaacat agcccgtgtg
     3481 ccgaaagaag ttcctgcatt cttgtgggct gaaatcggta acaatgcgac cgatcctgcg
     3541 cacgaggcgc gggatcgtgt gctcggccgc cttgcgcaga tgcgccttca ttttgctgaa
     3601 ggccggctaa ctgcgacatt tccaagatgc ccccctcggc ggtctccgtg ttgatccaca
     3661 tcaacgctct ccttcgcgtc atgccgtgag tcgttatcaa aaaggagagt gccatgttgt
     3721 cgtggagcga ttattggccg atggcagatc gtcatgtacg gacggtgaaa gcggacggag
     3781 caagcggaat aagagcagct caactcgcac catactcacg ccggggtttg cgttcatcgg
     3841 cattgccgac gcgttctatg tcgcctaggg gtgtgcattt actgcctcgt ccgccgtcgt
     3901 gacgctcctt ctcttccatg acgctccttc tcttcgtcac cgcgggtcag gcatttcacg
     3961 gcaacgcgca caggggcgac gacagcggcc acgatgaagc ggccgcagcc ttaaggccaa
     4021 gggcgatttt gcacggctga ctgatcgcaa acagggcagg gcgcgtctgc cgtatcgttg
     4081 accaggttgg gcgaaacaat gcagatctcg tcggcgcgcg ccccgttcaa actccagccg
     4141 ccgttcgggg cgacgagggc gcgaccccct taggcgatgt gtgcttgccg tccgatcgtt
     4201 cggcttgttc cgccatgtcc agccacctcg cgatgctttg gacagcgctg ccggtacgcg
     4261 gatcaagaac gatgagaccg ccttgccgcg ggcgagggcg tctcgactac ctgcacgttt
     4321 gtaggtaacg ccgccagggg caatgtcacc gacccggtgc cgttggtggg gtcgtagtca
     4381 atcacaccca agccagcttg ctgccagttc ggaatactca ccagcggcac catggacgtt
     4441 gggcgtccgg ctgctcggtc cgcaccaaag atgaacaggc tgagcggctc gtagtcgtcc
     4501 atacccatga tgcggagcgt gatggcatcg ctctcgagct ccgcccgtgt aaacggcaca
     4561 atcaccggca tcgtgtagaa attggcttcg ccaaactcca gatcttcctg gggcgtgtcg
     4621 cgaatctgaa acagaaccac caatctgccc tgactgacga tctggatttc aagcggcgcg
     4681 tcggtaacag tctcatgcgg gacagcggtg gcgaagatgc ctccatcctc tggcgggcgg
     4741 tcgcttgcgc ggctgcgcat gaggatgaac agccgccgga ttgccaaggt gccgctaccg
     4801 tggcccacaa ggtgtagcgg cacgctggag gggccctcgt tcgcatcggt gctcagcgtg
     4861 tcgatttccg tctcaatggc caccgcttgt gtttcgttca ctcccgagcg ggtgacgcct
     4921 tcgccgaaaa cgaacacatg ctgcgggcgc catgcgtcgt ctccgttgat ccccaggcgg
     4981 atggaggaat cagtgagttg ctcggtctgg atgccgttgt cggtcacgtc gacatcgtac
     5041 agattggcaa ttccccgctc ctgatcgctc tgctgtgtat cggtaaatgt atggttcaac
     5101 tgctcaacac catttgtatt cacggaaatg tggatggagc tgtcggtgcc ggagtctctg
     5161 ctctcgcggg tgagcatcgc cgtccacaat cggttgattt gcatcacaaa cctccttcgt
     5221 gtgtcgctcg ggccttacga cgaatgatat tgcagccggc cgcataagcc tgtgaattag
     5281 atcaccatcc accaaaccgt tatctgaact gcacctgacc catttgcgac attgcgatct
     5341 cggtagtacg gtcacctcga aagggggtac gcggtcgcta tcctgtcaag ctattcggat
     5401 tagacggcac gacgtgtcaa actagagcac gtccaggctt agagccgacg acgcacgcgc
     5461 tggagggata gatatgctgc gtcaattctt ggtgggtgcg gccgtcagcg cttgcgacat
     5521 tactatccat gcgctggtga tggcgaccgt ggtgcaggtt gcgcgattaa cgagcgcgaa
     5581 gagcacatcg cgaccatcgc tccatttgat cgccgtcatg attgtaaccg tttcagtcct
     5641 gatggctgca catgccttgg aggtcgtcgt ttggtcactg gcctacgcga tggttgatgc
     5701 tgcgccggcc gatgctgatc tcctgtattt cgcatttgtg aactacacga cgctcggcta
     5761 cggcgacgta actccggtgg agcgctggcg gctgcttggg ccactgacgg cgatgaatgg
     5821 cgtgctgctg ttcggttggt cgaccgccgt cattttcgaa gtgctgcgta gagcaatgga
     5881 ccgcggcttc gaggccacga tggttgaata accgttgcaa gctcaggctc gctattcgat
     5941 ctgggtggat catttttgcg tggattgctc tgccgacggt gatgtagggc ggctactcgc
     6001 ttattcaact catcaatcgg ggtaacgtcc tgacaccagc ccaaatcaac tttttccggg
     6061 cgggccacgc gcatgccggc gttctgacgc taatgtcgct cctgtattat ttatttctgg
     6121 attattatgt atttctggat cagacgtcac ttccatccgc agtcaaacgc gcagcgtgcg
     6181 ttgccatcgt tatcggcatc ctcgctcagt cgggggggtc tttatccacc tatctccgga
     6241 acgagctttt cagggtgcca aagtgactct aacgggcgcg atcattcttg tgtgtgtcat
     6301 tgcggtgctt gtctacggcc tcataaccct tcaccagcga tgtccacaca tgtgaaggct
     6361 ttcgcatgtc ggccgtgacg gatggttcgg cgtgcacggg cggccggcgc cacgactacg
     6421 tccgctttcg gacgcgctgc aggcgagatg tgctcggcgc aagcctctca gctcatgacc
     6481 cccattccgg acaaccggca tcacagttga ccgcattact tg
//
LOCUS       DATILV010000860         2638 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_720599, whole genome shotgun sequence.
ACCESSION   DATILV010000860 DATILV010000000
VERSION     DATILV010000860.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2638
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_720599"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(176..1738)
                     /locus_tag="VLJ17_20765"
     CDS             complement(176..1738)
                     /locus_tag="VLJ17_20765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010911033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HSV25446.1"
                     /translation="MSEPSSVDWIRSLFPFVVMCFGGFMALLDIQIVASSLQHIGGGL
                     SAAQDEISWLQTAYLIAEIIVIPLSGWLTRVFSTRWLFTASAAGFTATSMLCGLAWDI
                     HSMILFRALQGAWGASMIPIVFTSSLHYFQGPRRVYSAAVVGTIASVAPTLGPIIGGW
                     ITDTWNWHWLFYVNIVPGLAITFLTPLLVDIDKPDLRLLKDADYPGIALMAISLGTLE
                     YVLEEGTRWNWFDDGTITSCAWIAAISGILFVVRSLTFARPVVDLRALTNRNFSVGCF
                     LSFVTGIGIFSTIYLTPLFLGYVRGFSAWQTGIAIFSTGAASLIGVPIYIFLARKFDI
                     RWLMMFGLASFGLAMWSYSFITHDWGADQLLIPQILRGLPQVFVVAPAVNLGLASLPP
                     EQLKYASGLFNMMRNLGGAVGIAVCGAILNARTNFHFVAIASNLTPANGAMARLLDGV
                     VERYGALPGSPEAGHVAALKQLWQLAYREASTLAYADAFRAIMIAFVIATLLVPLLRN
                     VAPSGAGSSQAH"
     gene            complement(1750..>2638)
                     /locus_tag="VLJ17_20770"
     CDS             complement(1750..>2638)
                     /locus_tag="VLJ17_20770"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HSV25447.1"
                     /translation="SPHIAGFVAEILVTDNQRVDAGQVLVRLDDRDARAAAEHAEAVL
                     NQRTAMLASLRAKYALQQSTIQQAAADFDAKVAQASFAKLDAARYHTLALSDYGSRQN
                     AERTGAQDQAARAAVASAQAALAAANQQLSVLAANIDEAAAAVAQAQADLQTARLNLG
                     YAEIRSPISGYVGNRAARVGAYVSQGTYLLSIVPAHGLWVDANFKEDQLARMQPGQPA
                     TIVADTLPGHVFHGHLLSVAPATGAVFSVIPPENATGNFTKIVQRVPVRIALDDEDAS
                     LGRIRPGLSTVATVDTRSQ"
BASE COUNT          554 a          772 c          830 g          482 t
ORIGIN      
        1 tgttgccgcc ggtgataagg atattcttgt ccgctaacct acccattgtc gtcactcctt
       61 taggttaaac atgtccgtgt cggttacagt ttcggttgag ccgtcttgat ggcggcttgc
      121 gttgcggtaa ccatgttgat cccattgcct gtaatgttga ggcgagcccg tgcctttaat
      181 gtgcttggga tgaacccgca ccgctcggcg cgacattgcg cagaagcggc acgagcaggg
      241 tggcgatcac gaacgcgatc atgatggcgc gaaaggcatc ggcgtaagcc aatgttgatg
      301 cttcgcggta ggcgagttgc cacagctgct tcagcgcggc tacgtgtccg gcctcggggc
      361 tgccgggaag cgcgccataa cgctccacca cgccgtccaa cagtcttgcc atcgctccgt
      421 tcgcaggtgt caggttcgac gcgattgcca cgaaatgaaa gttcgttctc gcgttgagga
      481 tggcaccgca cacggcaatt ccgacggctc cgccgagatt ccgcatcatg ttgaacagtc
      541 cgcttgcgta tttcagctgc tccggtggca ggctagcgag gccgaggttc acggctggcg
      601 cgactacgaa aacctgtggc agacctcgca ggatctgcgg aatcaggagc tgatccgcgc
      661 cccagtcgtg agtaatgaag ctgtaactcc acattgccaa cccgaaggac gccagcccga
      721 acatcatcag ccagcggatg tcgaacttgc gggccagaaa gatgtaaatg gggacgccga
      781 tcagcgacgc ggcacccgtc gagaagatcg cgattccggt ctgccacgcg ctgaacccgc
      841 ggacatatcc caggaatagc ggagtgagat agatcgtgga aaagatgcca atgccggtaa
      901 cgaaggacaa gaagcatcca acggagaaat ttcgatttgt cagtgcgcgc agatcgacca
      961 ccgggcgcgc aaaggtgagg ctgcgcacga caaacaggat gccgctgatg gcagcgatcc
     1021 aggcgcagga cgtgatggtt ccgtcgtcga accaattcca gcgcgttccc tcctcgagca
     1081 cgtattcgag ggtgccgaga gaaatcgcca tcagtgcaat gccgggataa tccgcgtcct
     1141 tgaggagccg cagatccggc ttgtcgatgt cgaccagaag cggggtcaaa aacgtgatcg
     1201 ccaggccggg gacgatgttg acatagaaaa gccagtgcca gttccaggta tccgtaatcc
     1261 agccgccgat gatcggaccg agcgtcggcg cgaccgacgc aatggtcccg acgacggcag
     1321 cggaatagac ccggcgtggc ccctggaagt agtgcaagga cgatgtgaac acgatcggaa
     1381 tcatcgaggc gccccatgct ccttgcagcg cgcgaaagag gatcatgctg tggatgtccc
     1441 acgcgagccc gcacagcata ctggtggccg tgaaaccagc ggcggaggcg gtaaaaagcc
     1501 atcgcgtgga gaagacccgc gtcagccagc ccgaaagtgg gatcacaatg atctcggcaa
     1561 tcagataggc cgtctggagc cagctgatct cgtcctgggc cgccgacagc ccaccgccga
     1621 tgtgttgcag ggaagacgca acaatctgga tgtccagcag cgccatgaaa ccgccgaagc
     1681 acatcaccac gaagggaaac aggcttctga tccagtcgac ggaggagggt tcgctcattt
     1741 cgacctccgt tattgcgatc gcgtgtctac ggttgcgacc gtggaaagac ccggccgtat
     1801 cctgcccaac gacgcatctt catcatcgag cgcgattcgc accggaactc gctgcacgat
     1861 cttggtgaaa ttgccggtcg cgttctccgg cgggatcacg ctgaaaacag cgccggtcgc
     1921 cggggcgacg ctgaggaggt ggccgtgaaa gacatgaccc ggcagcgtgt cggcgacaat
     1981 ggtcgccggc tgcccgggtt gcattcgcgc gagctggtct tccttgaaat tcgcatcgac
     2041 ccagaggccg tgcgccggaa cgatgctcag caggtaggtg ccttgcgaca cataggcgcc
     2101 gacccgagcg gcacggttgc cgacatagcc gctaatgggt gaacggattt cggcataacc
     2161 gagattgagg cgggcggtct gcagatccgc ctgcgcctgc gcaaccgcag ccgcggcctc
     2221 gtcaatgttg gcggccagca cgctgagttg ctgattggcg gcagcaagcg cggcttgcgc
     2281 cgatgccacg gctgcccgtg ccgcctgatc ttgggcgcct gttctttccg cgttttgccg
     2341 ggagccgtaa tccgaaagag caagggtgtg ataccgcgca gcgtccaatt tcgcaaaact
     2401 ggcctgggct accttggcat caaaatctgc ggcggcctgc tggatcgtcg actgctgtag
     2461 cgcgtatttg gcgcgcaaac tggccagcat cgctgtgcgc tggttgagga ccgcttcggc
     2521 atgttcggcg gcggcgcggg catcgcgatc atcgaggcgc accagcacct gtccggcatc
     2581 aactcgctgg ttatcggtga ccagaatctc cgcgacgaag ccagcgatgt gcggagaa
//
LOCUS       DATILV010000861         8088 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3531648, whole genome shotgun sequence.
ACCESSION   DATILV010000861 DATILV010000000
VERSION     DATILV010000861.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8088
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3531648"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..686)
                     /gene="nuoF"
                     /locus_tag="VLJ17_20775"
     CDS             complement(<1..686)
                     /gene="nuoF"
                     /locus_tag="VLJ17_20775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HSV25448.1"
                     /translation="MLHDKDRIFRNLYGRGDWGLAGARARGAWDGTKAILEKGRDAIV
                     NEVKNSGLRGRGGAGFPTGLKWSFMPKQVGDRPHYLVVNADESEPGTCKDRDIMRHDP
                     HLFIEGCLIASFAMGADTCYVYVRGEFVRERERLEAAVEQAYEAKLIGRNNIHGWDFD
                     LIVHHGAGAYICGEETALLESLEGKKGMPRLKPPFPANMGLYGCPTTVNNVESIAVVP
                     DIMRRGAAWFA"
     gene            complement(690..1322)
                     /gene="nuoE"
                     /locus_tag="VLJ17_20780"
     CDS             complement(690..1322)
                     /gene="nuoE"
                     /locus_tag="VLJ17_20780"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007603551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HSV25449.1"
                     /translation="MSVRRLAPPEQQPASFAFTAENLAWAKQQIAKYPEGRQASAVIP
                     ILWRAQEQAGGWTPRKAIEYVADLLGMAHIRVLEVATFYTMFLLAPVGRKAHVQWCGT
                     TPCLLRGGEEIKRVCQRRIHHEPFHVSADGDFSWEEVECLGACVNAPMVLIGKDTYED
                     LTPQSFEKVLDAIGHGETPTPGPQNGRQFSAPFGGDTTLKDLPAFPSGKA"
     gene            complement(1322..2512)
                     /locus_tag="VLJ17_20785"
     CDS             complement(1322..2512)
                     /locus_tag="VLJ17_20785"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D"
                     /protein_id="HSV25450.1"
                     /translation="MTEAAIRNFTINFGPQHPAAHGVLRLVLELDGEVVDRVDPHIGL
                     LHRGTEKLIEYKTYQQAIPYFDRLDYVAPMNQEHAFCLAAEKLLDIVVPKRAQLIRVL
                     YAEIGRLLSHLLNVTTQAMDVGALTPPLWGFEEREKLMVFYERASGSRMHAAYFRVGG
                     VHQDLPEQLIDDIEAFCDPFLKVCDDLESLLTDNRIFKQRNVDIGVVKLADAWAWGFS
                     GVMVRGSGAAWDLRKAQPYECYAELDFDIPIGRHGDCYDRYCIRMEEMRQSIHIMRQC
                     IDRLRLAEGQGPVSVADNKIVPPKRAEMKRSMEALIHHFKLYTEGYHVPAGEVYAAVE
                     APKGEFGVYLVADGTNKPYKCKIRAPGFAHLQAMDFLCRGHLLADVSAILGSLDIVFG
                     EVDR"
     gene            complement(2509..3135)
                     /locus_tag="VLJ17_20790"
     CDS             complement(2509..3135)
                     /locus_tag="VLJ17_20790"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008136152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HSV25451.1"
                     /translation="MTNETLESLGRAIAGALPGAVNGYVVIKGELTISANAADIVRVA
                     AFLRDDPSCAFSSFIDVTAVDWPQRERRFDVVYHLLSPTRNQRVRVKIEVDEATSVAS
                     LIDVFPGVNWFEREVYDLYGVVFAGHPDMRRLLTDYGFEGHPLRKDFPLSGFVEVRWD
                     DEQKRVVYEPVQLMQEFRTFDFLSPWEGPHYPLPGDEKAANGSGKASA"
     gene            complement(3140..3733)
                     /locus_tag="VLJ17_20795"
     CDS             complement(3140..3733)
                     /locus_tag="VLJ17_20795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HSV25452.1"
                     /translation="MEEGSARMGLSERTVAPAATGLLDPRTGLPVGSDDAFYVGLNNE
                     LADKGFLVTAADDLIVWARTGSLMWMTFGLACCAVEMMQMSMPRYDAERFGFAPRASP
                     RQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYAVVRGCDR
                     IVPVDIYVPGCPPTAEALLYGVLLLQKKIRRIGTIER"
     gene            complement(3703..4068)
                     /locus_tag="VLJ17_20800"
     CDS             complement(3703..4068)
                     /locus_tag="VLJ17_20800"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009450025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HSV25453.1"
                     /translation="MSMLLQEYLPLVVFIGISAVIGLVLLVVPFIVAYRQPDPEKLSA
                     YECGFNAFDDARMKFDVRFYLVAIIFIIFDLEVAFLFPWAITFGQLGVFGFWSMMIFL
                     AVLTIGFIYEWKKGALEWD"
     gene            4398..5153
                     /locus_tag="VLJ17_20805"
     CDS             4398..5153
                     /locus_tag="VLJ17_20805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020087011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV25454.1"
                     /translation="MKATSDQTHILVVDDDPGVREVLRRGMEAEGFVVIEAANKDALF
                     RCLNAHPIKLITLDLGLGQQDGLELALEIRAAHNVPIIMITGRDAPLDRVAGLERGAD
                     DYITKPFHIREVSIRVRSVLARYGILDGDSIPGRFLRHETAQRYAFNSGVLDVPKREL
                     KKNDGAFIELTETEFRVLELFLKHPGRVLSRDEITQMLRGHDWDPLDRVVDGHVARLR
                     RKIEAPNDETRLIKSVRGVGYVFTGGVRPIYAL"
     gene            5419..6084
                     /locus_tag="VLJ17_20810"
     CDS             5419..6084
                     /locus_tag="VLJ17_20810"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV25455.1"
                     /translation="MVETQSCSRVASAAEAAVMHGLGVSAFQRGKIEAALKFMSRACA
                     HPEAPAVWHRNHAEILDRCGKAEAAEAAARLALLRDPKCAPAWDTLGTILVQRDRYAE
                     SCACYEKAVEIESNFVQALNNLAVTLDRLGRRQAAEAHYRRVLPLAPENSDIQLNLAT
                     LLGELEHYQEGLKIVHEVLARSPDLTRAHAIAAEFKRKLRQHAKLEKKKSAKAPRALP
                     VSP"
     gene            6377..7138
                     /gene="otsB"
                     /locus_tag="VLJ17_20815"
     CDS             6377..7138
                     /gene="otsB"
                     /locus_tag="VLJ17_20815"
                     /EC_number="3.1.3.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004805 - trehalose-phosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-phosphatase"
                     /protein_id="HSV25456.1"
                     /translation="MNVIPSSMTLPELRNPDRLALFLDFDGTLVAIGNRPDDVRLDPE
                     TREALTDLNRLLAGALAIVTGRDIATADHFLAPLRLSIAGVHGLMRRDAQGNTYASMV
                     DSRLPAAIERAVSPLLAKHPGLLVERKHGALALHYRAHPELEQASIEAMENAIGELRE
                     TEIMRGKMVVEVKALGGNKGTAIMDFLNEKPFAGRQAVFAGDDATDEDAFAAVNARDG
                     ISIKIGPGATHATYRAAGTAEFLTWLRQLPTQLRG"
     gene            7146..>8088
                     /locus_tag="VLJ17_20820"
     CDS             7146..>8088
                     /locus_tag="VLJ17_20820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HSV25457.1"
                     /translation="MRNLDLGLIGNCSVSALINQQAQIVWCCLPRFDGDPVFHALLGA
                     PGAACDDGVFSIEIENQTGSNQVYVDNTAILTTTLRAEGGAIEITDFCPRFYIRDRVF
                     RPQMLVRRIVPIDGNPRIRIRVRPRFDYGARVATITHGSNHVRYVGDKLILRLTTDAP
                     IDYVLEETAFKVAGPIHLILGPDETLSEGPAEAARALGEHTLDYWRGWTRRLAVPPEW
                     QEAVIRAAITLKMCSYEPTGAIVAAMTTSIPEAPNSARNWDYRYCWLRDAFFVVRALN
                     SLAAVGTMENYFRWIMNIVDDAAAGHIQPVYGIALERQ"
BASE COUNT         1753 a         2394 c         2398 g         1543 t
ORIGIN      
        1 gcgaaccatg ccgccccgcg ccgcatgatg tcggggacga ctgcgatcga ttccacgttg
       61 ttcaccgtgg tcgggcaacc gtaaaggccc atattggccg ggaacggcgg cttgagccgc
      121 ggcatgccct tcttgccttc cagactttcc aacagcgcgg tttcctcgcc gcaaatgtag
      181 gcgcccgcac catggtggac gatgaggtcg aagtcccagc cgtggatatt gttgcggccg
      241 atcagcttcg cctcataggc ttgctccacc gccgcctcta agcgttcgcg ttcacggacg
      301 aactcgccac gcacatagac gtagcaagtg tcggcgccca tggcgaagct cgcgatcagg
      361 cagccctcga taaaaaggtg cggatcgtgc cgcatgatgt cacgatcctt gcaggtgccg
      421 ggctcggact cgtcggcgtt gaccaccaga tagtgggggc gatcgccgac ctgcttgggc
      481 atgaacgacc acttgagccc ggtcggaaag ccagcgccgc cgcgcccgcg caacccggaa
      541 ttcttgacct cgttgacgat ggcgtcgcgg cccttctcca ggatcgcctt ggtgccgtcc
      601 caggcgccgc gcgcgcgagc gccagcaaga ccccaatcgc cgcggccata gagattgcga
      661 aagatgcggt ccttgtcgtg aagcatcggt tacgccttgc ccgacgggaa agcgggcaaa
      721 tccttgaggg ttgtgtcgcc gccgaacgga gcggagaatt gccgcccgtt ctgcggaccg
      781 ggcgtcggcg tctcaccgtg cccgatcgcg tcgagcacct tctcaaagga ctgaggggtc
      841 aggtcctcgt aagtatcctt gccgatcagc accatcgggg cgttgacgca ggcccccagg
      901 cactcgacct cctcccagga aaaatcgcca tcggcggaaa cgtgaaaagg ttcgtggtgg
      961 atgcgccgct ggcaaacgcg tttgatctct tcacccccgc gcaacagaca cggcgttgtt
     1021 ccacaccatt gcacgtgagc tttgcggcca accggagcga gcaggaacat ggtgtaaaag
     1081 gttgcgacct cgagcacccg gatatgcgcc atgccgagca gatccgcgac gtattcgatc
     1141 gctttacggg gcgtccagcc gccggcctgc tcctgggcgc gccatagaat cggaatcacg
     1201 gcagaagcct gacgcccttc cggatatttg gcgatctgct gcttagccca agcaagattc
     1261 tccgccgtga aagcaaagct tgcgggctgc tgttcgggag gggcaaggcg gcggacggac
     1321 attaccggtc cacctccccg aacacgatgt cgagcgaacc gagaatggcc gacacgtcgg
     1381 ccaacaggtg accgcggcag agaaaatcca tcgcctggag atgtgcgaag cccggcgcgc
     1441 ggatcttaca cttgtagggc ttgttggtgc cgtcagcgac gagatagacc ccgaactcgc
     1501 ccttcggggc ctcgacggcc gcataaacct cgccggccgg cacgtgatag ccttcggtat
     1561 agagcttgaa atgatggatc aacgcttcca tggagcgctt catctcggcg cgttttggcg
     1621 gcacgatctt gttgtccgcg acgctcaccg gcccctgccc ttcggccaag cgcagcctgt
     1681 cgatgcattg gcgcatgata tggatggact ggcgcatctc ttccatacgg atgcaatagc
     1741 gatcgtagca atcgccgtgg cggccgatcg gaatatcgaa gtcgagctcc gcatagcact
     1801 catagggctg cgccttgcgc agatcccagg cggcgccgga gccgcgcacc atcaccccgg
     1861 aaaagcccca tgcccaggca tcggcgagtt tgacgacgcc aatatcaacg ttgcgctgtt
     1921 tgaagatgcg gttgtcggtc agcagggatt caagatcgtc gcagactttg aggaacgggt
     1981 cgcagaacgc ctcaatgtca tcgatcagtt gctccggcaa atcttggtgt acgccaccga
     2041 cccggaaata agccgcatgc atgcggctgc ccgaggcgcg ctcgtagaac accatcagct
     2101 tttcgcgttc ctcaaagccc cacagcggcg gcgtgagtgc gcccacgtcc atcgcctgcg
     2161 tggtcacgtt gagaagatgc gacaaaagtc ggccgatttc ggcataaaga acacgaatga
     2221 gttgcgcccg tttggggacc acgatgtcga gcagcttttc ggccgccagg cagaaagcgt
     2281 gctcctggtt catcggcgcg acatagtcga ggcgatcgaa atacggaatg gcctgctgat
     2341 aggttttgta ttcgatcagc ttttcggtgc cgcgatgcag gaggccgatg tgcggatcaa
     2401 cacggtcgac cacctcgccg tcaagttcca gcaccaggcg cagcacgccg tgagccgccg
     2461 gatgctgcgg tccgaaattg atggtgaaat tgcggatcgc ggcctcggtc atgcgctggc
     2521 cttcccggag ccattcgccg ctttctcgtc gcccggcagg gggtagtgcg gcccctccca
     2581 tggtgatagg aaatcaaaag tgcgaaattc ctgcatcaat tgcaccggtt cgtagacgac
     2641 ccgcttctgc tcgtcgtccc agcgcacctc gacaaagccc gagaggggga aatctttgcg
     2701 cagcggatgg ccctcgaaac catagtcggt gagcagacgg cgcatgtccg gatggccggc
     2761 aaacaccacg ccgtaaagat cgtacacttc gcgctcgaac cagttgacgc ccggaaacac
     2821 atcgataagg gaagcgaccg aggttgcttc atcgacctcg attttgacgc ggacacgctg
     2881 attccgggtc ggcgatagaa gatgatatac gacatcgaaa cgtcgttcac gctgcggcca
     2941 atccaccgcc gtgacatcga tgaaggagga aaacgcgcac gagggatcgt cacgcaaaaa
     3001 cgccgccacg cgcacgatgt cggctgcatt ggcggaaatc gtcagttcgc ctttgatcac
     3061 gacgtagccg ttgaccgccc cgggaagcgc cccggcaatg gctcgaccga gggattccag
     3121 cgtctcgttg gtcatttcgt caccgctcga tggtcccgat ccgccgaatt ttcttctgca
     3181 gaagcagcac gccgtaaagc aacgcctcgg cggtcggcgg acagcccgga acatagatgt
     3241 ccaccggcac gatgcggtcg caaccgcgta ccaccgcgta ggaatagtgg taatagccgc
     3301 cgccattggc gcatgagccc atggaaatca cgtagcgcgg ctccggcatc tggtcgtaaa
     3361 ctttgcgtag cgccggcgcc atcttgttag tgagcgtgcc ggccacgatc atgacgtcgg
     3421 actggcgcgg cgacgcccgc ggcgcaaagc caaagcgctc ggcatcataa cgcggcatcg
     3481 acatttgcat catctcgacc gcgcaacacg caagcccgaa ggtcatccac atcagggagc
     3541 cggtgcgtgc ccacacgatc aggtcgtcgg cggcggtaac gagaaaaccc ttatcggcca
     3601 gttcattatt gaggccgaca taaaaggcat catccgagcc caccggcaga ccggtgcgcg
     3661 ggtcgagaag cccggtcgcg gcgggagcga cggttcgctc gctcaatccc attcgagcgc
     3721 tcccttcttc cattcataga taaatccgat ggtcaaaacc gcaaggaaga tcatcatcga
     3781 ccagaacccg aaaacgccga gctggccgaa tgtgatcgcc caaggaaaca ggaacgcaac
     3841 ttcaagatcg aagataataa agataatcgc caccagatag aagcgcacat cgaacttcat
     3901 gcgcgcgtcg tcaaaagcgt tgaatccaca ctcgtaggcc gacagctttt ccggatcagg
     3961 ctgccgatag gcgacgatga acggcaccac caggagcacg agtccgatca ccgcggaaat
     4021 acctataaag acgacgagag gaagatattc ttgcagcagc atactcatcg tcacctctca
     4081 gcgcccccga ttgcgaatcg caactgccgc acaacggccc cggcgccgcc gaaatgactt
     4141 ggaaaaacct gattcgatcc acagcagagg agacgccgga ggcttagcgc agtgcacaat
     4201 agcgtgcaag tcgatgttgg tagcattgtg atcgtggaag ggcgcatgtg tcggtccctc
     4261 gcggcttccg tttggctgca catgacgata agcgtccgat aaggggtctt cgaatatttt
     4321 tgcggctgag ctaatatcaa atgccctcgt catggttgaa ccaatccgga gaggtaaaga
     4381 atttcgcaga ccaaacaatg aaggctacga gcgatcagac tcacatcctc gtcgttgatg
     4441 acgatccggg ggttcgggag gtcctgcgtc gcggcatgga agccgaggga tttgttgtta
     4501 ttgaagcagc caacaaggac gctttgttcc gctgcctaaa cgcccatcca atcaagctca
     4561 ttacactcga tctcggactt ggccagcagg atgggcttga attagcgctt gaaataagag
     4621 ccgcacataa cgttccgatc atcatgatca ctgggcggga tgccccgctc gatcgcgtcg
     4681 ccgggctcga gcgcggggcc gacgattaca tcacgaagcc gtttcatatc cgcgaagtgt
     4741 ctatacgcgt gagaagcgta ctcgctcgtt acgggatttt ggatggcgac tcaattcccg
     4801 gtcgtttctt gaggcacgaa acagctcaga gatacgcttt caattccggc gttcttgatg
     4861 tccccaagcg agaacttaaa aagaacgacg gcgcattcat cgaactgacc gagaccgagt
     4921 ttcgggtcct tgagctgttt ctcaagcatc cgggccgtgt tctgtctcgc gatgaaatca
     4981 cgcagatgct cagaggccac gattgggatc cgctagatcg cgtcgtcgac gggcatgtgg
     5041 cacgactgcg ccgcaagatt gaggctccca acgacgaaac gcggttgatt aaaagcgtgc
     5101 gcggcgtcgg atatgtcttc accggcgggg taaggccgat ctacgctcta tgattgaaga
     5161 tatcactaat tgcaaatcaa agattgtgaa aagaggggct tttcactgcg cgcatgcact
     5221 tttggggcaa acaattctac acaattctcc gccttcacaa ttgtaagcga cctgtcagta
     5281 tggaatacgg acgcggcaga catgcgcgcc cccacaccct cataccgaaa aacagttggc
     5341 gcggagtgtc ctctgcccaa tgggggagag attggctgga gattaaaggg gggagagatt
     5401 ggccggagat aaaggaaaat ggtcgagacg caatcatgtt cccgggtagc cagcgcagcg
     5461 gaagcggcgg taatgcacgg gcttggtgta tcggccttcc agcgcgggaa gattgaggct
     5521 gcgctgaaat tcatgtcgcg ggcgtgcgcc catcccgaag cgccggcggt ttggcatcgc
     5581 aatcatgccg agatccttga tcggtgcggg aaggcggaag cggcagaggc cgcagcccgg
     5641 cttgcgcttt tgcgcgaccc aaagtgcgcc cccgcttggg ataccctggg taccattttg
     5701 gttcaacgtg acaggtatgc ggaaagttgc gcatgctatg aaaaggcggt tgagatcgaa
     5761 tccaactttg tgcaagctct caacaatttg gccgtgaccc tcgatcgcct cggtcggcgt
     5821 caagcagccg aggcgcatta caggcgggta ttacccctgg cgccggagaa ctcggacatc
     5881 cagctcaatc ttgcaacctt gttgggggag ctggaacact atcaggaagg gttgaagatt
     5941 gtgcacgagg tcctggcccg cagtccagac ctgacaaggg cgcatgctat tgcagcggaa
     6001 ttcaagcgca aactgagaca acacgccaaa ttagaaaaga aaaagagcgc gaaggcgcct
     6061 cgcgcgttgc cagtgtcccc gtgacgtggt gattgcacag cgcccttagc ccctttttac
     6121 cttatcttca tcttcacacc gttgaaatcc tctgcctgcc cgtcgaattg cgagacgctg
     6181 gcgaaaacgc aatctctcac atcgcaaatc cgcaggcgcc acaaaggccg ctggccagcc
     6241 gccgcgacat gacataaccg aaagtgactg actcgatcat gtggcattca tgatctgcat
     6301 gcaggaatga ttgacctgcc gttgggttgg tctaatttcg cgttgtgcag cacaacgcgc
     6361 ctgcacgagt cgaggaatga acgttatccc gtcttcaatg accctaccgg aacttcgtaa
     6421 tcccgatcgg cttgcgttat tcctggattt cgatggaacc ctcgtggcca tcggcaaccg
     6481 tcccgacgac gtgcgactgg atccggagac gcgcgaagcc ctgacggacc tcaacaggtt
     6541 gctggcgggc gctctcgcca tcgtcacggg ccgggacatc gcgacggcag accattttct
     6601 ggcgccattg cgcctttcga ttgccggggt gcatggcctg atgcgacgcg acgcgcaagg
     6661 gaatacctat gcgtccatgg tcgattcgag gctcccggcc gcaatcgagc gggcggtatc
     6721 cccgttgttg gcaaagcatc ccggcctcct ggtggagcgc aagcacggcg cgctggcgct
     6781 ccactatcgt gctcacccgg aactcgagca ggcaagcatc gaagccatgg aaaacgccat
     6841 cggcgaactt cgagaaaccg aaatcatgcg tggcaagatg gttgtcgagg tgaaggcgct
     6901 cggtggcaac aagggtaccg ccatcatgga tttcctcaac gagaagccat tcgcaggccg
     6961 gcaggcggtg ttcgccgggg acgatgcgac cgatgaagat gcctttgctg cggtcaatgc
     7021 cagggacggc atttcgataa agatcggccc cggcgccacg catgcaactt accgggccgc
     7081 cggaactgcg gaattcctca catggctgcg acagctgccg acgcaactta gagggtgacg
     7141 ggacattgcg aaatcttgat ctcggactca tcggcaactg ctccgtcagc gcgttgatca
     7201 atcagcaggc gcagatcgtt tggtgctgcc tcccgcgttt tgatggcgat cccgtttttc
     7261 atgccctgct cggggcgccc ggggcggcct gcgatgacgg cgtcttttcg atcgagatcg
     7321 agaaccagac tggcagcaac caagtctatg tcgacaatac cgcaatcctg acgacaacgc
     7381 tgcgggcaga agggggagct atcgagatca ccgatttctg tccgcggttc tatattcgtg
     7441 accgtgtctt ccggccccaa atgttggtcc gccgtatcgt cccgatcgac ggaaacccgc
     7501 ggatacgaat ccgggttcgt ccacgtttcg actatggcgc gcgggtcgct acgatcacac
     7561 atggatccaa ccacgtgcga tacgtcggtg acaagctaat actgcgcctg accacggacg
     7621 ccccgatcga ctacgtgctc gaggagaccg ctttcaaggt ggcggggccc atccacctga
     7681 tcctggggcc ggacgaaacg ctctctgaag gccctgcgga agccgcgcgt gcgttaggcg
     7741 agcatacgct ggactactgg cgtggctgga cgcgccggct ggcagtgccg ccggaatggc
     7801 aggaggcagt gatacgggcc gccatcacgt tgaagatgtg cagctatgag ccgaccggcg
     7861 ctatcgtcgc cgccatgacc actagcattc cggaggcccc gaacagcgcc cgcaattggg
     7921 actatcggta ttgctggcta cgagatgcat tcttcgtcgt gcgagccctc aacagcttgg
     7981 ctgcggtcgg caccatggag aactattttc gctggatcat gaacatcgtc gatgatgcag
     8041 cggccgggca cattcaaccc gtgtacggca ttgcgctcga aaggcagt
//
LOCUS       DATILV010000862        11025 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4553603, whole genome shotgun sequence.
ACCESSION   DATILV010000862 DATILV010000000
VERSION     DATILV010000862.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 11025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11025
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4553603"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..340)
                     /locus_tag="VLJ17_20825"
     CDS             complement(<1..340)
                     /locus_tag="VLJ17_20825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007604136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HSV25458.1"
                     /translation="MLVLGIETTCDETAAAVVERHDDGRATILANVVLSQIAEHAAFG
                     GVVPEIAARAHVEALDLIIATAMADADRDFGVLDGVAAAAGPGLIGGVIVGLTTAKAI
                     AIVHEKPLIAV"
     gene            541..1476
                     /gene="hemC"
                     /locus_tag="VLJ17_20830"
     CDS             541..1476
                     /gene="hemC"
                     /locus_tag="VLJ17_20830"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008551662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HSV25459.1"
                     /translation="MTQSSAPFLRIGSRGSPLALWQAREVRTHLAAAHGVEPEAISIE
                     VIRTTGDIIQDRPLSEVGGKGLFTKEIEQALVDNAIDLAVHSSKDMPTMLPAGLKLAA
                     CLPREDARDVFISRKSTSLATLPHGAVIGTASLRRQAMVKRLRPDISVVTFRGNVDTR
                     LKKLDNGVVDATLLALAGLKRLGREAAATAVLEVDAFLPAVGQGAIGIEVREADTRTR
                     DLLIGINHPETLTALRAERAFLAVLDGSCRTPIAGHARIEAGALAFRGMILRPDGSEA
                     HETTRTGAILDAEGLGADAGRELKSRAAPDFFAVG"
     gene            1481..2197
                     /locus_tag="VLJ17_20835"
     CDS             1481..2197
                     /locus_tag="VLJ17_20835"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: protein motif:HMM:NF014641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HSV25460.1"
                     /translation="MRLLVTRPEPECERTATLLRSRGYEVLVLPLLRIDPVADAKLGV
                     GPWAAALFTSANAVRAIAAHRRFSELADLPAYTVGQRTQAAAAAARFASTISADGDVN
                     ALVRLILSKPPVANLPLLHCAGEDRAGDLAGALQSHGLRVETAIVYRSVMVTELTPKV
                     RDALAGGMIDAVLHYSARTAAAFVAAVTTAGVRDLSIQIRHLCLSAQVAAPLAGAGAK
                     AVEVASEANEQALLTCINRV"
     gene            2273..3514
                     /locus_tag="VLJ17_20840"
     CDS             2273..3514
                     /locus_tag="VLJ17_20840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25461.1"
                     /translation="MSNPEDNRRQETGPLSGRPRRQPPTIDVKAVEVSLDGKRAAAAG
                     SSMIESLTAMARSLKRMLATLSSVKFGVISSVCVIAVVAAGAFWVYLTPDDVDEPSRN
                     VATREVKPGDVIGRGADPETITQASSPTAPGADLANRVAALEAMLAPLPDRMAELARD
                     VRDNATAARIAGERAAGLFDKMKLSGDEQISLQQQERSTLENLAERLKLLESREVALQ
                     RKQEELDRVANAMVAPDKTIRLVIIAAALRTAVERSDPFTVELATARSLGLDEKTLAP
                     LEPFAATGVPTQNELLRSLSALVPELLRLSVPPDRELSYLERLQASAIKMMNIRPVRD
                     EPGDDPSTVIGRIEFKIMQQDLAGVVSELDKLPAPAKGLAQPWRAKAMGRQNAIESTR
                     LIATASLAKLGEPGARGPSPQ"
     gene            3511..5034
                     /locus_tag="VLJ17_20845"
     CDS             3511..5034
                     /locus_tag="VLJ17_20845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis HemY N-terminal
                     domain-containing protein"
                     /protein_id="HSV25462.1"
                     /translation="MIRVVAFLVLTAAFAYVANLLADHPAVVSIDWPWLGYHAGPPIG
                     ILIASIAGATVLLWTVGRLLFRAPGQIARTIAKRRAATGHLAIVRGLLAIGAGDVGAA
                     RHFAAKAGRLVPGQPLLLMLQAQTAQLSGERDGADAAFRAMVDRSDTKLFGLHGLFIE
                     ARRRNDSAAARQYAEDAARASSSLAWAGQAALEFRCRDGDWLGALEALERNRRGGLVR
                     AEAFRRQRAVLLTAQALSVKDRDAATAGELAQDAVKLCPGLVPAAALAGRLLAETGEQ
                     RKAMRILEAGWREGPHPDIANAYADLVPGASARDRLARVRQLARLAEAHPESALALAH
                     AALEAHEFAEARASLAPLTREPTRRVATLMARIETAEHGDTGLAREWMARAVHAAHDP
                     AWTADGVIAETWLPVSPVTGRLDAFQWRVPVADLTPRGPVIVPAERTLQIPSISVSSP
                     QAAPTMSEPQTKPPLKPADQSDALQAHAPDDPGPDPEPLLDPVPKPSVVGGKMRSWF"
     gene            complement(5135..5929)
                     /locus_tag="VLJ17_20850"
     CDS             complement(5135..5929)
                     /locus_tag="VLJ17_20850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008138965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSV25463.1"
                     /translation="MWGNVRAATKAARGCLVLEDDLSEEQSCQIADHIREELARRRIS
                     RRGLADLAKISISTLEKALSGRRPFTLATTIRLEEALGISLRARLATVPASSRLAPGE
                     LGYYSRPAVSGIEGTYLTLRPSFGDRDTIYAYRIEIAWDDRCSSLVFRESERVDAAFT
                     QVGTVSVPNQSGHIYLVTNSNGQYRLIIVSRPTISGEMYGILTTLQVGRGSQLLPVSA
                     PVAMVPTKAIKDLQFGRILAADRCHALYRKYLKRTVDDQFAVFLSP"
     gene            6198..6329
                     /locus_tag="VLJ17_20855"
     CDS             6198..6329
                     /locus_tag="VLJ17_20855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25464.1"
                     /translation="MRWDFSGIDPAALGRHLALVTCWPLGSAVPGPLRYVVYADFVG"
     gene            6428..7660
                     /locus_tag="VLJ17_20860"
     CDS             6428..7660
                     /locus_tag="VLJ17_20860"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HSV25465.1"
                     /translation="MAKGDVHKVVLAYSGGLDTSIILKWLQTTYGCEVVTFTADLGQG
                     EELGPARDKALLLGIQPGNIFIEDLREEFVRDYVFPMFRANALYEGQYLLGTSIARPL
                     IAKKQIEIAEKVGADAVAHGATGKGNDQVRFELTYYALKPDVKVIAPWREWDLTSRTR
                     LIEFAEQHQIPIAKDKRGEAPFSVDANLLHASSEGKVLEDPAQEVPDYVYSRTADPEK
                     APDRPTYVTVAFERGDAVAIDGKKMSPAMLLARLNELGRINGIGRLDLVENRFVGMKS
                     RGMYETPGGTILHAAHRGIESITLDRGAMHLKDELMPKYAELVYYGFWFAPEREMLQA
                     AIDRSQEFVSGEVRLKLYKGNAVVVGRESPYSLYDQDLVTFEEGAIAYDHRDAAGFIR
                     LNALRLRTLAQRKKKLKL"
     gene            complement(7805..9529)
                     /locus_tag="VLJ17_20865"
     CDS             complement(7805..9529)
                     /locus_tag="VLJ17_20865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HSV25466.1"
                     /translation="MTRNSILFSTGTAILVAIAHPQLSLSAPAADGIRLAQAAAPPTD
                     EKRPADDKRAPGQRPGQGTPPGQQHPPAAAPPGRPAPGAAQPTPQQQQRPSPPPAAAQ
                     TPPAQQQPHVPPPPGQAQTPPGAPPHVAPPATVQTQPSQERQRPGTPATQPNALPPAT
                     AQTPPGQQPPRPGAPATQPNTLPPAAAQTPPGQQSPRPGVPAIQQTAPPPPAAVQIPP
                     GQQPPRPGAPATQQNALPVPGAPNAPALSAPPPAAQAPAQPLRPAAPAPALANAPVDP
                     RAMPQNIDQLRNERHQTQEGNRIVIQEANRTIIREGGHDIIRHNEADRFRFNAREVNV
                     ERRGNNTVTVVLRPDGARIVTEVDESGRLLRRVRRDAVGREVILIDNSFEPRGPGYAG
                     FFVELPPPVVRIPREVYVRETARATADDIFVTLMAPPVDRIERHYALDEIRYSEPLRA
                     RMPRVDIDTVNFETGSWEISPDQAERLAFVAQGISRAVQRNPREVFLIEGYTDAVGND
                     VDNLSLSDRRAESVAVMLTNQFSVPAENLTTQGYGKQFLKIPNDGPERANRRVAVRRI
                     TPLLVGQN"
     gene            complement(10251..>11025)
                     /locus_tag="VLJ17_20870"
     CDS             complement(10251..>11025)
                     /locus_tag="VLJ17_20870"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013650947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008177 - succinate dehydrogenase
                     (ubiquinone) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HSV25467.1"
                     /translation="EFTLPKNSTVTEGNAWPAPAGARNLRAYRIYRWNPDDGHNPRLD
                     TYHVDLGDCGPMVLDALIWIKNKIDPTLTFRRSCREGVCGSCAMNIDGTNTLACTKDM
                     KDINGDVKIYPLPHMPVVKDLVPDLTQFYAQQASIKPWLQTDSVTPEKEWKQSHDDRV
                     KLDGLYECIMCACCSTSCPSYWWNSDRYLGPATLLQSYRWIIDSRDEATGDRLDNLED
                     PFRLYRCHTIMNCAKACPKGLNPAQAIAEIKKLMVERQT"
BASE COUNT         2021 a         3367 c         3529 g         2108 t
ORIGIN      
        1 tcacggcgat caggggcttt tcatgcacga tcgcaatcgc cttggcggtg gtcaagccca
       61 cgataactcc gccgatcaac cccggcccgg ccgccgccgc tactccatcg agcacgccga
      121 agtcgcggtc ggcatcggcc attgcggtcg cgatgatgag atcgagcgcc tcaacatggg
      181 cacgcgccgc gatttccggc accacaccgc cgaatgccgc atgttcggcg atttgcgaca
      241 ataccacatt ggcgagaatg gtggcacggc cgtcatcgtg gcgctccacc accgccgccg
      301 ccgtttcgtc gcaggtcgtt tctataccga gcacaagcat cgcggtttcc gccggggcca
      361 gcaaggcttc ttgttaggtc gaaccatcag tgtctttgcc cgacttgacc gcggcaatcc
      421 ccgcggtggt tatcggatcg cccggtcaag ccgggcaata acaggtgggt gtcgacctat
      481 ccgaaaaatg ctctaagagc cactgaaccc ggtttgaacc gggtagcatt gtggggtccc
      541 atgacgcaat cctcggcacc gtttctgcgc attggttcgc gcggcagccc gctggcactg
      601 tggcaggcac gggaggtgcg cacgcatctg gcggccgcgc acggggtcga gcccgaggcc
      661 atctcgattg aggtcattcg taccacgggc gacatcattc aagaccgccc gctgtcggaa
      721 gtgggcggaa agggcttatt caccaaagag atcgagcagg cgcttgtcga caacgcgatc
      781 gatctcgcgg tgcattccag caaggacatg ccgaccatgc tgccggcggg gctcaaactg
      841 gccgcgtgtc tgccccgcga agatgcccgg gatgtcttca tcagccgcaa atccacttcc
      901 ctcgccaccc tcccgcacgg cgccgtgatc ggtaccgcat cgttgcgccg gcaggcgatg
      961 gtcaagcgtt tgcggccgga catttcggtc gtgacgttcc gcggcaatgt cgatacacgg
     1021 ctaaagaagc tcgacaacgg cgtggtggat gcgacgctgc tggcgctcgc tggcttgaag
     1081 cggctcgggc gcgaagctgc cgcgacggca gtgctggagg tggacgcgtt tctgccggcg
     1141 gttgggcaag gcgcaatcgg cattgaggtg cgcgaggctg atacccgtac ccgtgactta
     1201 ctgatcggga tcaaccatcc cgaaaccctg acggcgcttc gcgccgagcg cgcatttctg
     1261 gctgtcctcg acggctcctg ccgcacgccg atcgccggcc atgcgcgaat tgaggccggc
     1321 gccttggcat ttcgcggcat gatcctgcgc cctgacggca gcgaggcgca cgagacaacg
     1381 cggaccggag ccattctgga tgccgaaggg ctcggcgccg atgcggggcg cgaattgaag
     1441 agccgggccg ctccggattt ctttgccgtc ggatgacccc gtgcgcctcc ttgttaccag
     1501 gccggagccg gaatgcgagc gcaccgcgac gctgctgcgc tcgcgtggtt acgaagtgct
     1561 ggtgctgcca ctgcttcgga tcgatccggt cgcggacgcc aagctcggtg ttggcccgtg
     1621 ggccgcagcg ctgttcacga gcgccaacgc cgtccgagcc attgcggccc atcgccggtt
     1681 cagcgagctt gccgatctac cagcatacac ggtggggcag cgcacccagg ctgccgctgc
     1741 tgcggctaga tttgcgtcaa ccatttcggc cgacggcgat gtcaatgctc ttgttagatt
     1801 aattctgtca aagccgccgg tcgctaacct gcccctgcta cattgcgcgg gcgaagaccg
     1861 cgccggcgat ctggcgggtg ccctgcaatc gcacgggttg cgcgtggaga ccgcaattgt
     1921 ctaccgttcg gtcatggtga ccgagttgac acccaaagtg cgcgacgcct tagcgggcgg
     1981 catgattgac gctgtcctgc actactcggc ccgtaccgcc gccgccttcg tggccgccgt
     2041 aacgacagca ggtgttagag atttatcaat tcaaatccga cacttatgct tatctgccca
     2101 ggttgcggcg cccctcgcgg gagcaggcgc caaggccgtc gaggtcgcaa gcgaagccaa
     2161 tgagcaggcg ctgctcacat gtatcaatcg ggtgtgagaa aagctgcaag ttgcattgcc
     2221 acacgacgtc cgcactatgc cggtgtgcat gcgaggaatt cggagtttcc cgatgtcgaa
     2281 cccggaagat aacaggcggc aagaaactgg ccccctgagc gggcgtccac gccgacagcc
     2341 cccgacaatt gacgtgaagg cggtcgaggt ttcgctcgat ggcaagcgcg ctgcagctgc
     2401 cggctcaagc atgattgaga gtctgaccgc catggcgcgt tcgctcaagc gaatgctggc
     2461 aaccctgtcg tccgtgaaat ttggggttat cagttccgtc tgcgtgattg cggtggtcgc
     2521 tgcgggtgcg ttttgggttt atctaacgcc ggacgacgtc gatgagccga gccgcaatgt
     2581 ggcgacccgc gaggtcaagc ctggtgacgt catcgggcgc ggcgctgatc ccgaaaccat
     2641 aacccaggca tcgtcaccga cggcgccggg tgccgacttg gcgaatcggg tggccgccct
     2701 tgaagcaatg ctggctccat tgcccgatcg catggctgaa ctcgctcgtg acgtccgcga
     2761 caatgcgacc gccgcccgca ttgccggtga gcgtgccgcg ggtctcttcg ataagatgaa
     2821 actgagcggc gacgaacaga tttcattgca gcagcaggag cgcagcaccc ttgagaatct
     2881 ggccgaacgc ctcaaattgc tcgaatctcg ggaagttgcg cttcaacgga aacaggaaga
     2941 attggatcgc gtcgccaacg cgatggtggc ccccgataag acgattcggc ttgtcataat
     3001 tgccgcagcc ttacgtaccg cagttgagcg cagcgaccca tttacggtgg aacttgctac
     3061 ggcgcggtca ctcggcctcg acgaaaaaac cctggccccg ctggagccct tcgcggcgac
     3121 cggggtgccg acgcaaaacg agctgctccg cagcttgtcg gcgctggtac cggagttgct
     3181 gcgtctgtcg gtgccgcccg accgagagct cagctacctc gagcgtctcc aggcgagcgc
     3241 cattaagatg atgaatattc ggccagtgcg ggatgaaccg ggcgatgatc catcgacggt
     3301 gatcggccgt atcgagttca agatcatgca acaggatctc gccggggtgg tgtccgaact
     3361 ggacaaactg ccggcgcccg caaaggggct agcgcagccg tggcgagcga aagcgatggg
     3421 gcggcaaaac gcgattgaat cgacgcggct tatcgcgacc gcctcgttgg ctaagcttgg
     3481 cgaacccggc gcgcggggac cctcgcccca atgattcgcg tcgtcgcatt tcttgttctg
     3541 acggccgcgt ttgcatatgt cgcgaacttg cttgccgacc acccggccgt ggtctccatc
     3601 gattggccct ggctcggtta tcacgcgggg cctccgatcg gaatcctgat cgccagcatc
     3661 gctggtgcca cggtgttgct gtggaccgtg ggacgcttgc tattccgggc tcctggtcag
     3721 attgctcgga ccatcgcgaa acgtcgcgcc gccaccggac atctggccat cgtacgcggc
     3781 ctactggcga tcggcgccgg cgatgtcggc gcggcgcgcc atttcgcggc caaagcgggc
     3841 cggcttgtgc ctggccagcc tttgctgctg atgctgcagg cgcaaacggc gcaattgtca
     3901 ggggagcgcg atggtgccga cgccgccttt cgcgccatgg tggatcgcag cgacaccaag
     3961 ctgttcggtt tgcatggatt gtttattgaa gcgcgacgcc gcaatgattc tgccgccgca
     4021 cgccaatatg ccgaagacgc ggcgagggcc tcgtcctcgc ttgcatgggc cgggcaggct
     4081 gcactcgaat tccgctgccg agatggcgac tggttgggtg cgctcgaagc tctggagcgc
     4141 aatcgcaggg gcgggctggt ccgcgctgag gcttttcggc gacagcgcgc cgtgttgctc
     4201 accgcacaag ccctttctgt caaagatcgc gacgccgcca ctgctggcga actggcccaa
     4261 gatgccgtca agctgtgccc aggcctagtc ccggcggcgg cgctcgccgg ccgcctcctg
     4321 gccgagaccg gcgagcagcg caaagcgatg cgcattctcg aagccggctg gcgcgaaggt
     4381 ccacacccgg atatcgccaa tgcttatgcg gacctcgttc cgggcgcgtc agcgcgcgac
     4441 cgcctcgccc gcgtgcgcca gctggcgcgg ctcgccgaag ctcaccccga gagtgcattg
     4501 gcgctggccc atgccgcgct cgaagcccac gaattcgcgg aggcccgtgc gagccttgca
     4561 cctctgacga gggagccaac cagacgagtt gcgactttga tggcgcgcat tgagaccgcc
     4621 gagcacggag acaccgggct cgcccgcgag tggatggccc gcgcggttca cgccgcccat
     4681 gacccggctt ggaccgccga cggggtcatc gctgaaacct ggctgccggt atcgcccgtg
     4741 accggccgac tcgacgcgtt tcaatggcgg gttccggtcg cggaccttac gccgcgtgga
     4801 cccgtcatcg tgccggcgga gcggacgctg caaataccat cgatctctgt gtcctcaccc
     4861 caagccgccc cgacaatgtc ggagccgcag acgaagccac cactcaagcc cgcagaccaa
     4921 tcagatgctc tacaggcaca tgcgcccgac gaccccggcc cggacccgga gccgctattg
     4981 gacccggtgc caaagccgag tgttgtggga gggaaaatgc gatcctggtt ttgaatggcc
     5041 cgttcaattg aactcgacca gcggtcgaaa caagtaccag tttggtaatc tcggaagagt
     5101 caatccaaac aaaatcaaac gccgcagaca tcgatcatgg cgagagaaac accgcgaact
     5161 ggtcgtccac ggtccgcttg aggtacttcc ggtataaggc atgacagcgg tccgcagcca
     5221 ggatccggcc aaactgaagg tctttaatgg ccttggtcgg aaccatcgcg accggggccg
     5281 aaaccggcag caactgcgag ccacgtccga cctgcagtgt cgtgagaata ccatacatct
     5341 cacccgaaat cgtgggacgt gacacgatga ttagccgata ttggccgttg ctattggtga
     5401 ccagatagat gtgtccagac tggttgggca ccgagacggt gccgacctgg gtgaacgccg
     5461 cgtcgacccg ctcagattcg cgaaagacca aactagagca ccggtcatcc catgcgattt
     5521 cgatgcggta agcataaatg gtatctcggt cgccgaacga cgggcggagc gtcagatagg
     5581 tcccctcaat ccccgatacc gccggacgcg aataatagcc gagctcgccc ggcgccagcc
     5641 ttgaagacgc cggaaccgtc gcgagccggg cgcgcaggct aatgccgagg gcctcctcga
     5701 gccggatcgt ggtggcaagc gtgaacgggc gccgccccga taacgccttc tcaagcgtgg
     5761 agatgctgat cttggccaga tctgcgaggc ccctccgcga tatccggcgg cgagccaatt
     5821 cctcgcggat atgatctgca atctgacagc tttgctcctc ggataggtcg tcttctaaca
     5881 ccaagcaccc ccgagctgct ttggtggctg cccgcacatt tccccacata tccgcacagg
     5941 cgtgcacaag gcaaggtgaa cctcgggccg cgccgttgcc gaacaagatg gaacctgccg
     6001 ccccagcctg cataaggcgt aagctcgcaa agtcgcatcg taggaccacg tgttccaacg
     6061 caggacagaa tgaggcgcct tgttgtgggc tttttgatcg cagttctggc tggcgtttct
     6121 gagccggatt aagacgacga gatcgtggtg acaaagcgag accgcacgat cgctcgcctt
     6181 cacgtcaccc atacgtggtg cggtgggatt tctccggcat cgaccctgcc gcgttgggcc
     6241 gacatctggc gctcgtgacc tgctggccgc tcggttctgc ggtgccgggg ccgctgcgtt
     6301 atgtggtgta tgccgatttc gtcggttgaa ccccattgga tatgcctaca gcccgcgctt
     6361 gcacctgtgg cggttcgccc tatagtccgc gccgacttcg gcatggggct gcgctgggag
     6421 gattggcttg gccaaaggtg acgtccacaa agtggtgctg gcctattcgg gcggccttga
     6481 tacttcgatc atcctgaagt ggctgcagac gacctatggc tgcgaggtgg tcactttcac
     6541 ggccgatctc ggccagggcg aggaactcgg acctgcccgc gacaaggcgc tgttgctggg
     6601 catccagccg ggaaatatct ttattgaaga tctgcgcgag gagttcgttc gcgactacgt
     6661 ctttccgatg tttcgcgcca atgcgctcta cgaaggccaa tacctgctcg gtacctcgat
     6721 cgcgcgcccc ttgatcgcaa agaagcagat cgagatcgcc gagaaggttg gcgctgacgc
     6781 cgttgctcat ggcgccaccg gcaaaggcaa cgaccaggta cgtttcgagc tcacctacta
     6841 tgccctcaag cccgacgtga aggtgatcgc cccgtggcgc gaatgggacc tcacgtcacg
     6901 cacgaggctg atcgaattcg ccgagcagca tcagattccg atcgcgaagg acaagagggg
     6961 agaagccccg ttctcggtcg acgccaacct gctgcatgcg tcgtccgagg ggaaagtgct
     7021 ggaagacccg gctcaagagg taccggacta tgtgtattcc cgcacagccg atcctgaaaa
     7081 agcgcccgat cggccgacct atgttacggt ggcgttcgag cgtggcgatg cggtcgcgat
     7141 cgacggcaag aagatgtcgc cggcaatgct gctggcccgg ttgaacgaac tcgggcgcat
     7201 aaacggcatc ggccggctcg atctcgtcga gaaccgcttc gtgggcatga aatctcgcgg
     7261 catgtacgag acgcctggcg gcaccatcct gcatgcggcc caccgtggca ttgaatcgat
     7321 tacgctcgac cgcggcgcca tgcatctcaa ggacgagctg atgccgaaat atgcagagct
     7381 cgtgtactac ggcttctggt tcgcaccaga gcgcgaaatg cttcaagccg cgattgatcg
     7441 cagtcaggag ttcgtcagtg gcgaagtgcg gctcaagctc tacaaaggca acgccgtcgt
     7501 ggtcggccgc gaaagtccct actcgcttta cgaccaggac ctggtcacct tcgaggaggg
     7561 ggcgatcgcc tatgaccacc gcgacgcggc cggttttatc cgactcaacg cgctcaggct
     7621 gcgcacgctc gcacagcgca agaaaaaact gaaactgtag ggggcgagtt cgctttaacg
     7681 cgctcgctcc catatgtgtc cttgcccggc ttgaccgggc aatccaggcc gtcggtggtt
     7741 gccccccatc gcccggtcaa gccgggcgag gacagatggg tggcgacgat agtggcagat
     7801 gtcgtcagtt ttgccctacc agcaatgggg tgatgcgacg caccgcgacg cggcggtttg
     7861 cgcgctccgg tccatcgttt ggaattttca ggaactgctt gccgtatcct tgcgtggtta
     7921 ggttttcggc cggcacactg aattggttgg tcaacatgac ggcgaccgat tcggcgcggc
     7981 gatcggacag cgatagattg tcgacgtcat tgccgaccgc atctgtgtaa ccttcgatca
     8041 ggaacacttc gcgtggattg cgttggacgg cacgcgatat cccttgagcc acgaaggcca
     8101 gacgctccgc ttgatccggg ctgatttccc aggaaccggt ctcgaaattt accgtatcga
     8161 tgtcgacccg cggcattcgt gcgcgcagcg gctcgctgta gcggatctcg tcaagcgcgt
     8221 agtggcgttc gatgcggtcc accggcggcg ccattaacgt gacgaaaatg tcgtcggcag
     8281 tcgcccgtgc agtttcccgg acatagacct cgcgcggaat acgtacgacc ggcgggggta
     8341 attcgacgaa aaatcccgca tagccgggac cgcgtggctc gaagctgtta tcgataagga
     8401 tcacctcgcg gcccacagcg tcgcggcgca cgcggcgaag cagccggcca ctctcgtcga
     8461 cctcagtaac gatccgcgcg ccgtccggcc gcagcaccac cgtcacggtg ttgttgccgc
     8521 gacgctccac attaacctcg cgggcgttga agcggaaacg atcggcctcg ttgtggcgga
     8581 taatatcgtg tccaccttca cgaatgatcg tccggttggc ttcctgaatg acgattcgat
     8641 tgccctcttg ggtttgatgc cgctcgttgc gtaattgatc gatattctgc ggcatggcgc
     8701 gtggatcgac cggcgcattt gcgagcgccg gagcgggtgc ggccgggcgt aatggttggg
     8761 ctggagcctg cgcggctggc ggtggggccg acagagccgg agcgttggga gcgccgggta
     8821 caggcaaagc attctgctgg gtagctggcg cccccggccg tggcggctgc tggcccggcg
     8881 ggatctgtac ggctgcgggt ggtggcgggg cggtctgctg aatggccggc actcccggcc
     8941 gtggcgattg ctgcccgggt ggagtctgtg cggccgcggg cggcaaggtg ttcggctgag
     9001 tagcaggtgc cccaggccgc ggcggttgct ggccgggcgg ggtttgcgcg gttgccggcg
     9061 gcaaggcgtt cggttgggta gccggggttc ccggccgctg acgttcctgg ctgggctgcg
     9121 tttgtacggt cgcgggcggt gccacatgag gcggtgcgcc gggcggggtc tgtgcttgcc
     9181 cagggggggg aggcacgtga ggttgttgtt gagcaggcgg tgtttgtgct gcggcgggtg
     9241 gagggctggg ccgctgttgc tgctgtggag tgggttgcgc agcgcccggc gccgggcgac
     9301 cgggaggtgc ggcggctggg gggtgttgct ggccgggcgg cgttccctga cccggccgct
     9361 ggccgggagc ccgcttgtcg tccgctggcc gcttttcgtc cgtcggcggc gcagcggctt
     9421 gcgcgaggcg aattccgtcc gcagcaggcg ccgaaagcga caattgggga tgcgctatgg
     9481 caaccagaat tgcggtgccg gtactaaaga gaatggaatt acgtgtcatt cggttcctcg
     9541 ccgggataat gagaagtcgt ggcaacgcgg caatcctcgg cacagaaatt ttgcctcttg
     9601 acctggttcc ggtggtctcg atggacggtc ttccccaagc ctcaacagta aaattcactg
     9661 tgccaaagat actgcgcttg ccgtctatcg gcgcgaattc gtgattcgac acgatcacgc
     9721 aacttgccgc accgaagggg atctctgcaa acgacgacaa cccgacaaaa ctgcggcaag
     9781 ccctcctcac cacggggcaa aagcccgccc gcgtccaatt gtcccaaaag ttgccaaaag
     9841 gtaatgcgct caggtcagag tttgttccac acaatcctca tagcgcggga cgggaaatca
     9901 acccgccgaa gtggaggctg tcggcagtcg tgaaaaatcc ccgacgcgat atttcaggag
     9961 acttcgcccg ggcaccggct tgatgatacc gctgcagcaa actcgcagaa tgtcttttgc
    10021 gattgtggga aagaatgacg caacgatagc ggccagttcc tcgccgtcat gacttgcaag
    10081 cctgcattcg tccaagacgc cttcgcggtc ataaaatccg agcgccttgg tacgcgtcat
    10141 agggcgcgta aaacaacgct cggaagtttt ccgcgagcct gatcggcatg ccgatgctta
    10201 tcgccgcgac ttgtggtctc cgaaccgcag ttctcgactt ttacgaactt tcaggtctga
    10261 cgctcgacca tcagcttctt gatttccgcg atggcctgag cgggattgag gcccttgggg
    10321 catgccttcg cgcaattcat gatggtatgg cagcggtaga gacggaatgg atcttcaaga
    10381 ttgtcgagcc tgtcaccggt cgcctcgtcg cggctgtcga taatccagcg ataggactgc
    10441 agcaacgtag cggggccgag gtaacgatcg ctattccacc aataactcgg gcacgaggtc
    10501 gagcagcacg cgcacatgat gcactcgtaa agcccgtcaa gctttacgcg atcgtcatgg
    10561 ctctgcttcc attccttctc gggcgtgact gagtcagtct gcagccatgg cttgatcgaa
    10621 gcctgctgtg catagaactg tgtaaggtct ggcaccagat ccttgaccac cggcatgtgg
    10681 ggcagcggat agatcttcac gtcgccgttg atatccttca tgtccttggt gcaggcgagc
    10741 gtgttggtgc catcgatgtt catggcgcag gaaccgcata cgccctcgcg gcaggaacgc
    10801 cggaacgtca gggtcggatc gatcttgttc ttgatccaga tcagcgcgtc gaggaccatc
    10861 gggccacaat cgccgaggtc gacgtgatag gtgtcgagcc gcggattgtg cccgtcgtcg
    10921 ggattccagc gatagatacg gtatgcgcgc aggttgcgtg cgcccgccgg cgccggccac
    10981 gcgttgcctt cggtcaccgt cgagtttttg gggagagtaa attcg
//
LOCUS       DATILV010000863         3362 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_721370, whole genome shotgun sequence.
ACCESSION   DATILV010000863 DATILV010000000
VERSION     DATILV010000863.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3362)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3362)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3362
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_721370"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(149..628)
                     /locus_tag="VLJ17_20875"
     CDS             complement(149..628)
                     /locus_tag="VLJ17_20875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012591688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV25468.1"
                     /translation="MPSLFRLAQDGTTVGSIGSTWPTEDQVKPPRLMPSNPNDDLSLG
                     KENFRQGNYGLAERYFRKAVEADPKDPEAWLGLAAAYDRLRRFDLADRAYEEVFKIVG
                     PTAEILNNQGYSFMLRGNFTRAREILLAARAKEPGNPYVENNIALLDERTPRRKSTR"
     gene            complement(861..1820)
                     /locus_tag="VLJ17_20880"
     CDS             complement(861..1820)
                     /locus_tag="VLJ17_20880"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HSV25469.1"
                     /translation="MEQLFEILDDSTGVILAAAVFIATATLVFGILASIRLRGAVRRR
                     TATISRETLEPSDRGGGSLRDSSMKAVQRLIDQTTKHYSSLDESNMRVLRNRLVQAGI
                     FNPRAVGFFFLVRAVLAIGFGTLSTITAPLLPESFSTIFWPIVGLGGLIGYLIPSLAL
                     DRIISRRRNEYRAGFPDFMDLLVVCADAGLAMEGALERVGRELGPSYPALSTNIHMTN
                     LEIRAGRTLTEALEHFATRIGLEEVKSFATLIQQSAELGSSITDALRVYSEDMRHKRL
                     SIAEEKAYALPAKLSFPLMVCIFPVLFVVILLPVIVRVKLGIF"
     gene            complement(1824..2792)
                     /locus_tag="VLJ17_20885"
     CDS             complement(1824..2792)
                     /locus_tag="VLJ17_20885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008834185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HSV25470.1"
                     /translation="MPFEIDQAYVIYGFAAVSAILLAETAYLLLFKAASYRSRINRRL
                     SLLTDQPDRVGILVQLRKERGLNQHGDFRLPIASLSRLILQSGLTVGLPRLILFAVIA
                     AFGVFGVVAVLRGDLMEAAVWMLVTGIVAPYVGLRMLRGRRQKKFGMQFPDAIDIIVR
                     SLRAGHPVPTAVSMVSREMPDPIGTEFGILADEVTYGADLETAMRNLYFRVGQDDLPL
                     FVTAVAIQGTTGGNLGEILQNLSAVIRQRFKMRRKVKALAAEGRLSALMLSSLPIGVF
                     FVINFISPEFYGSVWQYDLTKMMLGGAIFWMLLGNLVMYRLVNFRI"
     gene            complement(2797..>3362)
                     /locus_tag="VLJ17_20890"
     CDS             complement(2797..>3362)
                     /locus_tag="VLJ17_20890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015887177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HSV25471.1"
                     /translation="LQQPHVARMETRPPNIEGKGEIKQRDLIKNALRMRPERIILGEC
                     RGEEAFDMLQAMNTGHEGSMATIHANNPREAISRLEQMIGMAGLPMTIASIRGQIAAA
                     IRVVVQLSRLSDGKRKVTSIAEITGMEGDILQMQEIYKFIRTATLEDGTIQGHFAATG
                     IRPRFLADLVAKGIKIPGSYFEPGKPL"
BASE COUNT          760 a          984 c          933 g          685 t
ORIGIN      
        1 gtttgctccc gctgtgcaat tcggcgaaca aacgtttgat ctcttcaagc atgatggacc
       61 acgcaatccg ctggaaattt gtaaggactt tgacccgccg gcaaccttat tgctcatccc
      121 ttccggggac cagcaacgcg cttgggacct atcgagtaga tttgcgcctg ggcgtgcgtt
      181 cgtcgagcaa agcgatgttg ttttcaacat agggattgcc gggctctttt gctcgggccg
      241 ccaaaagaat ctcccgagct cgcgtgaaat tcccccgcaa catgaaagag tagccctgat
      301 tgttaagaat ttccgccgtc ggtcccacaa tcttgaagac ttcctcatag gcgcggtcgg
      361 cgaggtcaaa acgtcgcagt cggtcatagg cggctgccaa gccgagccag gcttcagggt
      421 ctttcgggtc cgcttcgacg gctttgcgaa aataccgttc cgcgagtccg taattgcctt
      481 gacggaagtt ctccttgccg aggcttagat cgtcattggg attgctgggc atgagcctcg
      541 gcggcttgac ctgatcttcg gtcggccatg tcgacccaat cgatccgaca gttgtaccgt
      601 cctgagccaa gcgaaatagg ctgggcacgc tggcggtggt actggaatcg gtttcgcaag
      661 cagtaagcca aacaagacat cctaccaaca agagtccttt tcgcatcacg cccacgctca
      721 caatccctgc gcctcaacgc gacccgggct tctccacgca acaggcccac agccctatcc
      781 tgttggtctg gtggaaatcc atacccgacc atatgcgacg atcgttaagg aaatctcgcc
      841 gcaaggcgtt ctgagccgca tcaaaagatg ccgagcttga cgcgcacgat cacgggcaaa
      901 agaatcacca cgaacagaac aggaaaaatg cacaccatca aaggaaacga caatttcgcc
      961 ggcagtgcgt aggccttctc ctcagcaatc gaaaggcgct tgtggcgcat gtcctcacta
     1021 tagactcgaa gtgcatcagt gatactggaa cccagctccg ccgattgttg aatgagcgtc
     1081 gcaaaggatt tcacctcctc aagcccgatg cgcgtggcga aatgctcgag cgcctccgtg
     1141 agggtacgac ccgcgcggat ttccagattg gtcatgtgga tgttggtgct cagcgccgga
     1201 tacgacgggc caagttcgcg cccgacgcgt tcgagcgccc cttccatggc aagcccggca
     1261 tcggcgcaga ccaccagcag atccataaaa tccggaaacc cagccctgta ttcgttgcgc
     1321 cggcgtgaga tgatccgatc aagcgcaaga ctcgggatta ggtatccgat caatcccccc
     1381 aggccgacga tcggccagaa gatggtgctg aatgattccg gcaacagcgg cgccgtaatg
     1441 gttgacaatg ttccgaagcc gatcgcgagg acggcgcgaa cgagaaagaa gaatccgacc
     1501 gcacgggggt tgaaaattcc ggcctgtacc aaccgattgc gcaagacccg catattagat
     1561 tcgtcaagcg acgaatagtg cttggtggtt tgatcgatga gccgctgtac cgctttcatg
     1621 ctgctgtcgc gcagtgaccc gcctccccga tcgctgggct ccaacgtctc gcgactgata
     1681 gttgcggtgc gtctgcgaac agcgccgcgc agacggatcg atgccagaat accgaacaca
     1741 agcgtggcag ttgcgatgaa aacggctgct gcgaggatta cgccggtgct gtcatcaaga
     1801 atttcgaaca gttgttccat ggatcagatc ctgaaattga ccaggcgata catgaccaga
     1861 ttgccaagca gcatccaaaa tatggcgccc cccagcatca tcttggtcaa gtcgtactgc
     1921 cagacgctgc cgtagaattc cggtgagatg aaattaatga cgaaaaacac gccgatcggc
     1981 agcgatgaca acattaaagc cgacaaccgg ccttcggccg caagcgcctt aaccttgcgc
     2041 cgcattttga atcgctggcg gatcacagcg gatagatttt gtagaatctc gcccagattg
     2101 ccgccagtgg ttccctgaat cgcaacagca gtcacgaaca gcggcagatc gtcttggcca
     2161 acacggaaat acagattgcg cattgcggtt tcgaggtcgg ctccataagt cacctcgtcc
     2221 gccagaatgc cgaattccgt cccgatcggg tccggcattt cccgcgacac catactcacc
     2281 gcggtcggca ccgggtgtcc ggcccgcagg ctgcgtacaa tgatatcgat cgcgtcaggg
     2341 aactgcattc cgaatttttt ctggcgccgg cctcgcagca tgcgcagccc gacgtaaggc
     2401 gccacaatgc cggtgacgag catccatacg gcagcttcca tcagatcgcc gcgcaggacc
     2461 gcaactacgc caaagacccc gaaggcagcg attaccgcaa ataaaatgag ccgcggcaaa
     2521 ccaactgtca ggcccgattg caggatcaac cggctcagcg aggcgattgg gagtcgaaaa
     2581 tcgccatgct ggtttagtcc acgctctttg cgcagctgca ccagaatgcc gacccgatcg
     2641 ggctgatcgg tcaggagcga caatcggcga ttgatgcgtg agcgatacga cgccgccttg
     2701 aacaacaaga gataggcagt ttcggcgagg aggatcgccg aaacggcagc aaagccatag
     2761 atcacatagg cttggtcgat ttcgaacggc atggcgtcaa agcggctttc cgggctcgaa
     2821 atagctgccc gggatcttga tgcccttggc gacgagatcg gccaaaaagc gtggtcgaat
     2881 accagtcgcc gcgaaatgcc cctggatggt gccatcctcg agcgtcgccg tgcggatgaa
     2941 tttgtagatt tcctgcattt gaagaatgtc tccttccatc ccggtaattt ccgcgatgct
     3001 ggtgaccttt cgcttgccgt cggacagccg cgaaagctga acaacgaccc gaattgccgc
     3061 agcgatctgg ccgcggatgc tcgctatagt catcggaagg cctgccatgc cgatcatctg
     3121 ttccaagcgg gagatcgcct ctcgtggatt gttggcatgg atcgtcgcca tcgatccttc
     3181 gtgaccggtg ttcatggctt ggagcatgtc gaaggcttcc tcgccacggc attcgccgag
     3241 gatgatacgc tccggccgca tgcgcagcgc attcttgatc aggtcgcgtt gcttgatttc
     3301 gcccttcccc tcaatattgg gagggcgggt ctccatccgg gccacatgtg gttgctggag
     3361 ct
//
LOCUS       DATILV010000864         8666 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_5065097, whole genome shotgun sequence.
ACCESSION   DATILV010000864 DATILV010000000
VERSION     DATILV010000864.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8666)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8666)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8666
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5065097"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..203)
                     /locus_tag="VLJ17_20895"
     CDS             complement(<1..203)
                     /locus_tag="VLJ17_20895"
                     /inference="COORDINATES: protein motif:HMM:NF022970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HSV25472.1"
                     /translation="MARAKDEVREQRIVMEAVVDAYGSSERAMGWYYYLDSKMKFPFK
                     ARCRLARPISVLKVKEEVEVLGMA"
     gene            complement(220..819)
                     /locus_tag="VLJ17_20900"
     CDS             complement(220..819)
                     /locus_tag="VLJ17_20900"
                     /inference="COORDINATES: protein motif:HMM:NF013375.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HSV25473.1"
                     /translation="MRIFLAGVSCVGKTAIGARLAGLLEYRFFDLDVETERFFGTSIE
                     RLRNRHLTSHDFRLVASQALKDVLSRGDGCNCVIALPPSGLLGGYWKVVNETRDAAIV
                     VLRDTAENILGRITFYDIDSRRVPMNLTDREKGLYLREIKRDIAYFRRSFCRAHMSVD
                     ITGCSPDEASRKVREALIPVLKDLSEALEQRSARTHPMV"
     gene            complement(1167..1898)
                     /locus_tag="VLJ17_20905"
     CDS             complement(1167..1898)
                     /locus_tag="VLJ17_20905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011505255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25474.1"
                     /translation="MVGAIAIRTENNVERHESSPSRGEVLARYRHLRQICKVHHSDAL
                     KLVSRDAILHQARRLGLADGKILILDSMDELTLAFDLAIHTAPAGRSRAIDRYARSTQ
                     FASGSDEALMLAAMCNARFAVVLVQRRHPSAGLIVTDLFRKSELWLMDEGLEISLPVG
                     TAFATRYYAPDRFVMTAGVGMPVDLALLTSAVESLPQLLRKSRAEAIEDRRFAEAVYR
                     AAIADGIMEGISFESPPAPARQHES"
     gene            2469..2711
                     /locus_tag="VLJ17_20910"
     CDS             2469..2711
                     /locus_tag="VLJ17_20910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25475.1"
                     /translation="MTHEINGFVVEPSNSHRRLLRRLAEPRHEYIFWITSDHVVLRAT
                     LPDDVGVRREDALYDAECSETDARKAAKEFQRQIFG"
     gene            3033..3503
                     /locus_tag="VLJ17_20915"
     CDS             3033..3503
                     /locus_tag="VLJ17_20915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HSV25476.1"
                     /translation="MYRKFMIGAVSTAVVALSTGAFAQQGQLGSAAEARGMEERVITE
                     LKANETAALAKFNKPDGGFRDRDLYVFCFNRMTGIFNAHVSPALMGTDNRLLKEKDGS
                     PLGQKIFDAVNAANEGNIVSVSYNFPKPNTTDPLPKESYVARVGGTACGVGYYK"
     gene            4036..4677
                     /locus_tag="VLJ17_20920"
     CDS             4036..4677
                     /locus_tag="VLJ17_20920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016557669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV25477.1"
                     /translation="MSSPIRIAVVDDHPLYREGICQTLTGAEGLEVVAEGSTAAGALK
                     AAQECLPDIILLDLGIPGGGINAAANIAGVCPSVRIIMLTASESEQDVASALQAGARG
                     YILKGSSGPEVIETVRVVYRGEHYVAASLGARLLIKISKRTEAVANDTPRDLTSREGE
                     IIALVSQGMSNKEVARKLKCTERTVKYHMTSIMQKCGVQNRVQAVLKLTRRAS"
     gene            complement(5409..5879)
                     /locus_tag="VLJ17_20925"
     CDS             complement(5409..5879)
                     /locus_tag="VLJ17_20925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20 family protein"
                     /protein_id="HSV25478.1"
                     /translation="MRAFDFAPLYRSTVGFDRLFSMLDQFAGVADSVSNYPPCNIERS
                     SENAYRISVAVAGFTDADLSIETKENRLTIRGEKQINDEEKTGDVLYRGIAARTFERN
                     FQLADDVKVKGASLESGLLHVDLLCEIREAMKPRSIPIANSSQLLEVKPTKVAA"
     gene            complement(6225..6362)
                     /locus_tag="VLJ17_20930"
                     /pseudo
     CDS             complement(6225..6362)
                     /locus_tag="VLJ17_20930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611772.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
     gene            6483..6860
                     /locus_tag="VLJ17_20935"
     CDS             6483..6860
                     /locus_tag="VLJ17_20935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25479.1"
                     /translation="MRVNWEVVKPALWTGVGGVVVGMFLLSYGFGFMSPNAAEKVAST
                     SSEKAIIAVLAPVCADKFGALPDVEARTAIIVADKDNSYKMRAAFPAALITLPGKTYP
                     DSDLTEACAGLILSPPKTAGVKQ"
     gene            6879..7055
                     /locus_tag="VLJ17_20940"
     CDS             6879..7055
                     /locus_tag="VLJ17_20940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25480.1"
                     /translation="MTNKPTAPKDANEKTGVSHPGMMGDGTEEQNLNERGDPAARIKR
                     NEVDAAFGKQSPKK"
     gene            7441..7665
                     /locus_tag="VLJ17_20945"
     CDS             7441..7665
                     /locus_tag="VLJ17_20945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006613601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25481.1"
                     /translation="MARKPATGAQLVLFDVFYEDGSQRSNRRVPSEILGGLDGDAPAG
                     AVIEEQDRLIAEKSSNPALTVKSVRRSRAR"
     gene            complement(7734..7997)
                     /locus_tag="VLJ17_20950"
     CDS             complement(7734..7997)
                     /locus_tag="VLJ17_20950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25482.1"
                     /translation="MSTILRGKTVIKGSDPEEPAQELFSQRRKPEIGQFRLQVDRQTK
                     ASFSTYEAAEEAGMEIKKGHPVVRVAVYDAVECSNRIIELPKT"
     gene            complement(8092..>8666)
                     /locus_tag="VLJ17_20955"
     CDS             complement(8092..>8666)
                     /locus_tag="VLJ17_20955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TCP-1/cpn60 chaperonin family protein"
                     /protein_id="HSV25483.1"
                     /translation="IEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVRERKDRV
                     DDAMHATRAAVEEGILPGGGVALLRAIKAIEKIRTGNDDQKTGVDIVRKALSWPARQI
                     AINAGEDGSVVVGKILDKEQYNFGFDAQNGEYGNLMTKGIIDPTKVVRVALQGAASVA
                     GLLITTEAMVAEVQRKQPAAPGVPGGGMDF"
BASE COUNT         1858 a         2510 c         2502 g         1796 t
ORIGIN      
        1 gccatgccga ggacttctac ttcctctttg accttaagaa cggagatggg ccgcgcgagt
       61 ctacagcgcg ccttgaatgg aaacttcatc ttgctgtcga ggtagtaata ccagcccatc
      121 gctcgctcgc tggagccata agcatcgacc acggcttcca tgacgattcg ttgctcgcgt
      181 acttcatcct tggcgcgtgc cattgttcca ccttccaggc tagaccatcg ggtgcgttct
      241 tgcagagcgt tgctccaacg cttcgcttag atccttcaac accggtatca aagcctccct
      301 aaccttgcgc gacgcttcgt cggggctaca gccggtgatg tcgacggaca tatgcgctct
      361 gcagaaggag cgcctgaagt acgcgatgtc tctttttatt tcgcgaaggt agaggccctt
      421 ctcacgatcc gttaaattca ttggcacccg gcgcgagtcg atatcataaa acgtgatcct
      481 cccgaggata ttctcggcgg tatcccgaag cacgacaatg gcggcgtctc gcgtctcgtt
      541 gacaactttc cagtagccac ccaacaggcc actcggcggc agtgcaatga cacaattgca
      601 gccgtcccct cgagatagaa catccttcaa ggcttgagat gccacgaggc ggaaatcgtg
      661 cgacgtcagg tgtcggtttc gaagacgctc gatcgacgtt ccaaagaaac gctcggtttc
      721 aacatccaag tcgaaaaacc gatattcaag gaggccggcc agtcgcgcgc ctatagcggt
      781 cttgccgaca cagctgacac cagcgaggaa tatgcgcatg ttgcagcctt cgataagagc
      841 cgtgcgattt cgaggttggg atcataagtg attggtgcca tctgttggcc gggtattccg
      901 gcaagtgcgg cgagcaccgg ccagataggg tctcccgact tgatctaccg tcgagcatca
      961 gctcggcgaa ttacgattag gggagctgcc ggtcaacggt attgacgcag tgccgccaag
     1021 aatccgcgcg cagaggggga tagcttcgcg cgcgatggcg caactcgtta gggcgccgcg
     1081 gcgaacaagt agcgcccatg ttgaccgacc gtggcgcacc actccacagt acgctatcga
     1141 cgccaacatg acaccctttt gcgatgtcag ctttcatgct gcctcgccgg cgccggcggg
     1201 ctttcgaagg atatcccctc catgatcccg tcggcaatcg cggctcgata gacggcctca
     1261 gcgaagcgcc gatcctcgat cgcctcggcg cgagacttgc gcagcaattg gggcaacgat
     1321 tcgaccgcgc tcgtgagtag agcgagatca actggcatgc cgacgccggc cgtcatgaca
     1381 aaacgatcgg gcgcgtaata ccgggtcgca aaggccgtcc caaccggcag ggatatctcg
     1441 aggccctcat ccatcaacca gagttcggat ttccgaaaca ggtcggtgac gatcagcccg
     1501 gcggatgggt gtcggcgctg caccaacacg accgcgaagc gcgcattgca catggcggca
     1561 agcatgagcg cctcgtcgga acccgacgca aactgggtcg atctggcgta tcgatcgatc
     1621 gcccgggaac ggccggctgg agccgtgtgg atcgcaagat cgaaggccag cgtcaactcg
     1681 tccatgctgt cgagaatgag gatcttgccg tcggccagac ccaagcggcg cgcttggtgc
     1741 aggatcgcat cccgggatac gagtttcagt gcgtccgaat gatgcacttt gcagatttgg
     1801 cgcaggtgcc ggtagcgcgc gagcacctcg ccacggctcg gcgacgactc gtgccgttcg
     1861 acgttgttct ccgtccggat cgcgatggcg ccgaccataa tgacctcgac gtttcgacgg
     1921 ccgctgctgc ggattgcgca acagcgccac agtgtctctc gtatcctggc ttgctgattc
     1981 ggggaatcgc caaaggccga caatccacgc atttcgcgta cgcggcccgg caaacgcgtt
     2041 gaattttact gtgaagattc tcacctcaaa ggcaacttgc ttacgcgcca ggcgtcagag
     2101 gggtgtcgcg cagttgcgat gatctgccgc gctacgaaac acgggatgca gtgtcgacca
     2161 agcaacgggc gctaaggtgc ttcggcgcat ctggtcatcc ccaatggtca cggattgtct
     2221 ctgaagcgta gtgcggaatc gcgggccgtc gcagttccgg cgacagccgc gcacctccgg
     2281 ccgcagcatc atagcgctac ggcgaacgag tagatccatc tccatcgacc gcgacgcgac
     2341 ggcgtgcgga tggcattgtg gacatctacc gattttctaa acaggcgtga cctccgtcac
     2401 agagcgcttg cgttgcgctc tgctagcttt ctcgcgtcag tggaattcga ggttcaggca
     2461 ggaaagtcat gacgcatgaa atcaacggct tcgtcgtcga gccgagcaac agccatcgtc
     2521 gcctgctccg gcggctggca gagccaaggc acgagtatat tttctggatc acttcggacc
     2581 acgtcgtgct gcgtgcgacc ctgccagatg atgtcggcgt tcgtcgggaa gacgctctat
     2641 atgacgcgga atgctccgaa acggacgctc ggaaagccgc caaagagttc cagcgtcaga
     2701 ttttcggttg agcctgaagg cttcggggaa acaaatcagt ggtaaggcgt tcgaagtttt
     2761 gaggatcaat ttttgagcgg cacgatttat gagagtgcta ttgctatcta gttcgagtaa
     2821 gcgcataagt gaacccttca ggcgcgcggt ggcctggaat tgctgctcaa aaaacggcga
     2881 ctttccgaga tcgccgcttc ctcaattcgg cggcactggt gcccatcggc aggcacgatt
     2941 tcaatcttga aatcgataat cggttcatat cgcgggtgcc gcttggcgcc ctcttatgcg
     3001 cttgctttcc cgactaacac ggagaaaaat ccatgtatcg taaatttatg atcggtgcgg
     3061 tctcgaccgc agttgtcgcg ctatcgaccg gcgcattcgc gcagcagggg caactcggat
     3121 ccgctgccga ggccaggggc atggaggagc gcgtgatcac ggagttgaag gctaacgaga
     3181 ccgcagccct cgctaagttc aacaagcctg acggtggttt tagagatcgc gatctttacg
     3241 tcttttgctt caacagaatg accggcatat tcaatgcgca cgtgtctcca gcccttatgg
     3301 gtacggacaa cagattgcta aaggaaaaag acggttctcc gttaggtcag aaaatcttcg
     3361 acgcggtgaa cgcggcgaac gaaggaaaca tcgtcagcgt gagctacaat tttcctaagc
     3421 caaataccac cgatcctctt ccaaaggaat catatgtcgc cagggttggc ggtacagcgt
     3481 gcggggtcgg ctattacaag taagccgttc caggacggat gattttgtgg ggcgtcgaag
     3541 ttcggcgccc ctgatcctca atgacagctt cgacaatgga cattgcagtc ctgaattcgg
     3601 gtgcgccgta gtcggcggaa cccgcaggcc gcgcggggct agcgtttcag atgcgcccaa
     3661 tctcgacccc tgcggggaac gcatccaaat ttctcctttc cgatttgttc ccttttgatc
     3721 tttcatttcc gtcagaacta ccgtacgctg aaacgtggtc aggcagattt gtcttgactg
     3781 agagctgccc gaaaatcggt gacctcccga agtctccgat gtctatcttt ggcagcccaa
     3841 tgccgtcggc aggcaaaatt tcgctctcaa atctgttgtt aaatcgcggg tgcctcacgc
     3901 atgcgcgatc tgccttaggt cgcgagcgtt gatttatcga tagcgatgat ccgtccgatg
     3961 aacggtgact tcgcaacgag acgcttcgat acgagcgcat caggcacgcc agccacagaa
     4021 agaacagcaa aaaccatgtc tagtcctatc cgcatcgccg ttgtcgacga ccacccgctg
     4081 tatcgcgaag gtatatgcca aacgctgacg ggagcggagg gccttgaggt tgtggcagag
     4141 ggttcgacgg cagcaggcgc cctcaaggcc gcccaggagt gccttccgga tatcattttg
     4201 ctcgatctag gaataccagg aggcgggatc aatgcagctg ccaatattgc cggcgtctgt
     4261 ccctccgtgc gaatcatcat gctgactgcc tccgaaagcg aacaagatgt cgcctcggcg
     4321 ctgcaagcag gtgcgcgggg ctatattctg aagggcagca gtggacccga ggtgatcgag
     4381 acggtgcggg tcgtctatcg tggtgaacac tatgtggcgg cgagcttggg ggcgcgattg
     4441 ttgataaaga tcagcaagcg aaccgaagca gtcgccaacg acaccccccg tgatcttacg
     4501 tctcgtgaag gagaaatcat cgcacttgtg tcgcagggca tgtccaataa agaggtcgcg
     4561 agaaaactca aatgcaccga gagaaccgta aagtatcaca tgacgagcat catgcagaag
     4621 tgtggcgttc aaaaccgcgt ccaggctgtg ctcaagttga cgcggcgagc cagctagttc
     4681 ggagttgtgc cccgcagcca aagtgctagg tagcgcgatt cagagcaatt gattgcgccg
     4741 catgacagca gagcaaaggc ggttcgcagc atttccgctt cgggtccagg ctgtgtaaca
     4801 caacctgggt cattaagagc cgtgcccgac gggtcgcatc atggccgctg tactttcaac
     4861 tgcggaacag gcagcggcga tgccgggacg ggcgaccggg agtcaattgt cgctgcgaca
     4921 gtccgcctta taattagtcg cgcagccagg atcgatgctg agagacgctc ggactaggga
     4981 gaaagccccg cgctgaaacg ctccaaatgg atcacgcggc ggagaacgcc catcccattt
     5041 cgacaccgga aggataatca ataggcatgt tcgcgtcgct gcgccaacgg tcgacatacg
     5101 gctgaccgag gttgcggctc aaacaaattc agccaagcat atcgaagaca aggggccgca
     5161 ttcgattccc gtggtcaggc ccgccaaatt tcaaattgat acactatgcg ccccagttcg
     5221 ttgggctcaa gttggccgct gcgattgcac aaagtccccg gcgtcaaaga aatgatcgaa
     5281 gctcaaagcg caagcatcaa ttatctctcc gcccgcagcc cgggtctaaa tccgatcgaa
     5341 caacctttgc caaactcaaa tggcccctgc gcaggaccac cgaacgcacc gatgttcact
     5401 tccacctctc aggcagcgac cttggttggc ttgacctcca ggagctggct ggaatttgca
     5461 atcggaatcg accgcggctt catcgcctcc cgaatctcgc acaggaggtc gacgtgtagg
     5521 agcccgctct ccaggctcgc gcccttgacc ttgacatcgt cggcgagctg gaagttacgc
     5581 tcgaaggttc gcgcggcgat gccccggtag agcacgtcgc cggtcttttc ctcgtcgttg
     5641 atctgtttct cgccgcggat cgttagcctg ttctccttcg tctcgatcga aagatcggcg
     5701 tcggtgaagc cggcaactgc gacggagatg cgataggcgt tctcactcga ccgctcgata
     5761 ttacagggcg gatagttcga taccgagtct gccacgccgg cgaactggtc gagcatggag
     5821 aacagccggt caaagccgac ggttgaacgg tagaggggag caaaatcgaa tgcacgcata
     5881 gcatgatctc ctatttgagc gacatgcgaa cggtccgccc tttagggcct aaccttccgt
     5941 acccacggag ccttacggcc tgcgcacatg gattcaactg agccttcgta agggctacac
     6001 cgaataattc ccggatatga ttgtgttttc acatcacgat tacgacacaa cgatctcaag
     6061 aaatacaatt gaaaataaca attggctagt tcatagcccc tgaaatacta gcttccggtc
     6121 atgttcgaac gtagccggcg tgacgaaaga agttttgcgt tcttggcgct gaaatcggta
     6181 acgacgcgac cgatccgccg caacaggcgt ggggctgtgt gttcggccgc cttacgtaga
     6241 tgcgccttga gtttgctaaa ggccgactcg atggggtcga ggccggcgcc agccgcttcg
     6301 atcgcctccg cgactccggc aactttgtgg accggtaaat tgtccataac cacgatatcg
     6361 ccggcgatta ccttaacgac taattcctta tagatgaatg cggcgcaact gagcaatttt
     6421 gctcagaatc ccctcggtaa gtgcgcgtac aatactttaa atccaaacag gaggaacgcc
     6481 ccatgagagt caattgggaa gtcgtaaaac ccgctctgtg gaccggagtg ggtggagtgg
     6541 ttgtcggtat gttcctgctc tcgtacggtt tcggcttcat gagcccgaat gcggccgaaa
     6601 aagtggcaag cacgagttct gaaaaagcga tcatcgctgt gctggcgccc gtgtgcgcag
     6661 acaagttcgg tgcactgccg gatgttgagg cacgaacagc gatcatcgtc gcggataagg
     6721 acaattccta taaaatgcgc gctgccttcc cggcagctct gatcaccttg ccgggcaaaa
     6781 cctatccgga ttcggacctg accgaggcat gcgcaggcct aattctctca ccgcctaaga
     6841 cagcgggcgt caagcagtag tcgtcgagga ctattgatat gacgaataag cccacggctc
     6901 ctaaggacgc caatgagaaa accggcgttt cccatcccgg catgatgggc gatggcaccg
     6961 aagagcagaa tctcaacgag cgcggtgacc cggcggctcg tatcaaaagg aatgaggtgg
     7021 atgccgcctt cggcaagcag agccccaaga agtagaggtg ggatcgttgt ggtcggtggc
     7081 gacgtagtcg atggtgtcag tcagaattcg actgtcattc tcgggattct cggctttgcg
     7141 ctgttgtgta tctcctcggc tcgcttcgcg tgttgcggca gtacgggcgc ggcgtcctaa
     7201 tgcttcttgg aaaattcgac ggcgtgcggg ccgggcccct caatgagggg cagatggtca
     7261 gctgtgacgt tgtgagcgag cgcggcaaat tggccgccgc gaatctgata gccgtctagc
     7321 tctcggttgc gatcaacaga aatcaggccc ggcgataata cgctgggcct tttgtacgtt
     7381 ccgggggtgc cgcgatcagc atggccgaga tgtccgccgg caagcaacgg caggagaatg
     7441 atggcacgaa agccggcaac gggagcacaa ctcgtcctct tcgatgtgtt ctacgaagac
     7501 ggctctcagc ggtccaatcg cagagttccg agcgaaatcc ttggtggcct tgacggtgac
     7561 gcgcctgcgg gtgccgtgat cgaggaacag gaccggctta tcgccgaaaa gtccagcaat
     7621 cccgcattga cggtcaagag cgtccgccga tctcgtgcca gataagccgc cacgcaacgc
     7681 gccgatcgca gggttcacgg tattggattg aagacaggct gcgccgggcg agattacgtc
     7741 ttcggtagct cgataatccg atttgagcac tcgacggcat catacacagc cacccgaacc
     7801 acagggtgcc ccttcttgat ttccatcccg gcctcctcgg cagcttcgta ggttgaaaac
     7861 gacgccttag tctgccgatc cacttggagc cgaaactgac caatttccgg ttttcgacgc
     7921 tgcgaaaaca attcctgcgc cggctcttcc ggatccgacc ccttgataac tgtcttaccg
     7981 cgtaaaatcg ttgacatgag gttccccacg ctggcgcggc ggatggtagc cacccgccgc
     8041 tagaagcatt tcccgattag cttggtactc ttgtcgcggc caacttcgag cctagaagtc
     8101 catgcctccg ccgggcacgc caggcgctgc cggttgcttc ctctgcacct cggccaccat
     8161 ggcctcggtg gtgatgagca ggcccgcgac cgacgcggcc ccctgcaacg cgacgcgcac
     8221 caccttggtg gggtcgatga tgcccttggt catgaggttg ccatactcgc cgttctgggc
     8281 gtcgaagccg aaattgtact gctccttatc gaggatcttg ccgaccacca cagagccgtc
     8341 ctcgcccgca ttgatggcga tctggcgcgc cggccatgac agcgccttgc ggacgatgtc
     8401 gacgccggtc ttctggtcgt cgttaccggt gcggatcttc tcgatcgcct tgatggcgcg
     8461 cagcagtgca acgccgccgc ccggcagaat gccctcttcg accgcggcgc gggtcgcgtg
     8521 catcgcgtcg tcaacgcgat ccttgcgctc cctcacctcc acctcggtgg cgccgccgac
     8581 acggatcacc gcaacgccgc ccgcaagctt ggccagacgc tcttgcagct tctcacgatc
     8641 gtagtcggag gtggtctcct ctatct
//
LOCUS       DATILV010000865         9693 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2255585, whole genome shotgun sequence.
ACCESSION   DATILV010000865 DATILV010000000
VERSION     DATILV010000865.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9693
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2255585"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(258..1871)
                     /locus_tag="VLJ17_20960"
     CDS             complement(258..1871)
                     /locus_tag="VLJ17_20960"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011923925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004612 - phosphoenolpyruvate
                     carboxykinase (ATP) activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase"
                     /protein_id="HSV25484.1"
                     /translation="MEETGLRNSAHGADKFGFSGLAGVHWNLTAAPLYEHALANREAH
                     LVQGGALCAETGVHTGRSPKDKFVVCDEHTEKTIWWDKNGKLTPAQFELLHRDFLEHA
                     KGKQLYVQDLYGGADPQYRIKARVFTELAWHSLFIRTLLIRPDRCEISHYVPDFTILC
                     LPSFKADPKRHGVRSETVIAIDFTKRMILIGGSYYAGEMKKSVFTTLNYYLPAESVMP
                     MHCSANVGADGDVALFFGLSGTGKTTLSADSTRILIGDDEHGWGPNGVFNFEGGCYAK
                     CIRLSKEAEPEIYAATLRFGTVLENVIFDPETRICHFDDDRKTENTRSAYPLDYIPNA
                     SRTGRAGMPKNIVLLTADAFGVMPPIAKLTPAQAMYHFLSGYTAKVAGTEKGLVGVQP
                     EFSTCFGAPFLPRHPSVYGNLLRELIGAHGVDCWLVNTGWTAGKYGVGRRMPIKVTRT
                     LLAAALNGSLRNAKFRTDPYFGFAVPTQLAGVEPHLLYPHKTWQNKAEFDETARNLVA
                     MFQNNFVAYESHVDADVRAAAPEVQIAAQ"
     gene            complement(2178..3851)
                     /locus_tag="VLJ17_20965"
     CDS             complement(2178..3851)
                     /locus_tag="VLJ17_20965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012482982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4166 domain-containing protein"
                     /protein_id="HSV25485.1"
                     /translation="MTRILILGGYGNFGGRLAQMLAEEERLTLVIAGRSYERAKTFCA
                     GLSGVAKLEPHGFDRDGYVLAQLRDITPEIVIDASGPFQAYGDDPYAVVKACIALNIH
                     YLDLADASAFVNGIAAFDQEARTRDLFVLSGVSSFPALTAAVLRTLSRDMARVETMTA
                     GVAPSPFADIGVNVFRAIASYAGKPIAILRDGRKATAHALHDAQHFTIAPPGSLPLRP
                     RRFTLVDVPDLAALPALFPSLRTVWIGAGTVPGFLLHALGLLAWLVRLDMVSTLGPFA
                     VWMHRASRLLRWGEHRGGMFVTVAGTADDGGRIVREWHMIAEGDDGPFIPSMAAAAIV
                     RRILDGRRPAAGARSGTADVLLADYETQFARRRICSGVREISPQPSSLYRRLLGAAYD
                     TLPPSVRCLHDFHSKYVAKGRATVDRGDGWIARRIAKIFGFPPAGDDIPVVVDFRRDG
                     DREVWQRNFGGQLFSSIQEAGRARFDRQLCERFGPCAFGLALVVDNARLWFVVRCWSV
                     FGVPLPLWLAPTCEAYECEEADRFRFFVELRYRFIGLIVRYRGWLEVCH"
     gene            complement(3848..4297)
                     /locus_tag="VLJ17_20970"
     CDS             complement(3848..4297)
                     /locus_tag="VLJ17_20970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007530749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DCC1-like thiol-disulfide oxidoreductase family
                     protein"
                     /protein_id="HSV25486.1"
                     /translation="MREPYSYRRDPAVPEFPDDRPIVIFDGHCVMCSGFARFLLRHDR
                     RGILRLVPAQSALGRALYVHYELDPIEYETNILLAAGIAWFKAEGSIRMAEQLGFPWR
                     LATLFRLLPSAWREAFYDVIARNRLRIFGRRDVCYVSDPRYADRFLT"
     gene            complement(4308..5069)
                     /locus_tag="VLJ17_20975"
     CDS             complement(4308..5069)
                     /locus_tag="VLJ17_20975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2470 domain-containing protein"
                     /protein_id="HSV25487.1"
                     /translation="MPDRLPETARPPDDFNPVAIAKELLRATRAGALATIDRNGGYPF
                     SSLVNIATDVDGSPLILVSRLSTHTANIEVDPRASVLLASTGKGDPLAHPRLTVLGTF
                     VNIERGTPDGMRVQRRFLSRHPKSKLYADFGDFTFWRLHVVSAHFNGGFARAADLKAS
                     DIVTNLEDAAEIIEIEESAVDHMNADHRDAVRLYATKLLSETDGDWQVTGVDPEGLDL
                     ALGDRTARMFFAERVTNGVALRKALVEWGARARAQ"
     gene            5240..5938
                     /locus_tag="VLJ17_20980"
     CDS             5240..5938
                     /locus_tag="VLJ17_20980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008385075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV25488.1"
                     /translation="MATIALVDDDRNILTSVSIALEAEGYRIMTYTDGASALDGFKSS
                     PPDLAILDIKMPRMDGMETLRRLRQKSDMPVIFLTSKDEEIDELFGLKMGADDFIRKP
                     FSQRLLVERVKAVLRRSGGKDGAVPKETDAAKVLERGQLRMDPERHTCTWKNEPVTLT
                     VTEFLILQALATRPGVVKSRNALMDAAYDDQVYVDDRTIDSHIKRLRKKFKQAEDSFD
                     MIETLYGVGYRFKE"
     gene            6250..7974
                     /locus_tag="VLJ17_20985"
     CDS             6250..7974
                     /locus_tag="VLJ17_20985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HSV25489.1"
                     /translation="MGVLRRTWHFFVSQSSSSLTRRIVILNIAGLLAFGLGIIYLTQF
                     RAGLIDARVQSLIVQGELIAIAVAGQATESDAINVDPERLLELQAGESYGPSDNTLFG
                     FEFPVNPERVAPLLRRLITPTNTRARIYDRDGTLILDSRNLYGRGDVLRFDLPPPTAE
                     RPGIVERTYIAIRTWLGRGDLPPYREIGPENGKGYPEVAQALDGQKASVVRINDRGEV
                     IVLVAAPIQRFRTVRGALLLQTQGGDIDQTVEAERLAILKVFLVAAGIMSAFSMLLAG
                     TIAGPVRRLADSADRVRRRVRGRVEIPDFTRRRDEIGLLSGNLREMTSALYSRIEAIE
                     SFAADVAHELKNPLTSLRSAVETLPLAKTDSSRSRLLAVLKHDVQRLDRLISDISDAS
                     RLDAELQRQEAAPVDLQKLLSAVVTLANEIKHEDGVTVALIFEGSPRIFMVQGHDSRL
                     SQVINNLIDNARSFSPPDGKVRVTCRRSGPEIVTTVDDDGPGIRPEAIEKIFERFYTD
                     RPQQNFGQNSGLGLSISKQIVEAHDGRLSAQNRVAPVGSLANAKGDDQIIEERILGAR
                     FVVRLPAM"
     gene            7981..8445
                     /locus_tag="VLJ17_20990"
     CDS             7981..8445
                     /locus_tag="VLJ17_20990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012494089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr kinase/phosphatase C-terminal
                     domain-containing protein"
                     /protein_id="HSV25490.1"
                     /translation="MNDAPTIHASAVLTGARAILIRGPAGSGKSRLALNLIQAASNGL
                     LVFARLVADDRVHVHAAHDRLIARPPAALAGLLEVRGLGIQQVQYEPMAVVSWVVDLH
                     VATAKRMPDSAETRTVIAGVSIRCLAVAAGCDPVPMVLATVTSPHYLFRGGS"
     gene            8666..9067
                     /locus_tag="VLJ17_20995"
     CDS             8666..9067
                     /locus_tag="VLJ17_20995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HSV25491.1"
                     /translation="MIGLVLVTHGQLATEFRSALEHVVGPQKQIEPITIGPDDNVEQR
                     RRDIIEAVKKVDTGDGVVILTDMFGGTPSNLAISVMSRPNVEVLAGINLPMLVKLVKV
                     RDECPLAEAVVAAQESGRKYITIASRVLAGK"
     gene            9064..9399
                     /locus_tag="VLJ17_21000"
     CDS             9064..9399
                     /locus_tag="VLJ17_21000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HSV25492.1"
                     /translation="MKDTPLAGEDDCSPDLAAIPPDAIVRALKIVNQKGLHARASAKF
                     VQTVEKFDADVRVSRGSEFVGGTSIMGLMMLAAGPGSEITVVASGKEKAEVLAALELL
                     VNGRFGEDD"
     gene            complement(9484..9693)
                     /gene="tnpA"
                     /locus_tag="VLJ17_21005"
                     /pseudo
     CDS             complement(9484..9693)
                     /gene="tnpA"
                     /locus_tag="VLJ17_21005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001278583.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
BASE COUNT         2003 a         2850 c         2936 g         1904 t
ORIGIN      
        1 tgcgcccatc agcatcattc gccaatacat cgaacggcag agaaacccgc aatcagattc
       61 atatcggcgc caacgcgtct cagcgcctat ctccggcgtg aaaccccgca gcttgctgcg
      121 ctaaaattct tggtcagttc aaagtcgcgg acgcaaagcg agggcaagcc cgctatccat
      181 tcttcgcaaa ttgtcttcat agattacggg ctgcggaccc gcgtcgtggg aattaagagt
      241 cacgaatatt gcagggttta ctgcgcggcg atctgcacct caggcgccgc ggcgcggaca
      301 tcagcatcga catggctctc gtacgccacg aagttgttct ggaacatggc gacgaggttg
      361 cgggcagttt cgtcgaactc tgccttgttc tgccaagtct tgtgcggata gagcaagtgc
      421 ggttcgacac cggcgagctg ggtgggcacc gcgaagccga aatacggatc ggtgcggaac
      481 ttggcgttgc gcagcgaccc gttgagtgcg gcggcgagca atgtgcgcgt caccttgatc
      541 ggcatgcgtc tgccgacgcc atatttgccc gcggtccaac ccgtattgac cagccaacaa
      601 tcgaccccgt gtgcgccgat cagttcgcgc agcaagttgc catagactga cggatggcgc
      661 ggcaggaacg gcgcgccgaa gcaggtggaa aattccggct ggactccgac cagtcccttt
      721 tcggtaccgg cgaccttcgc ggtgtaaccg gacaggaagt gatacatcgc ttgggcgggc
      781 gtgagcttcg cgatcggcgg cattaccccg aaggcatcag cggtgagcag cacgatattc
      841 ttcggcatgc cggcgcggcc ggtacgcgac gcattcggga tgtagtcgag tggataggca
      901 gaccgggtgt tctcggtctt gcggtcgtcg tcgaaatggc agatgcgggt ctcaggatcg
      961 aagatgacgt tttccagaac ggttccaaag cgtagcgttg cggcatagat ttcgggctcg
     1021 gcctccttgg agagccgaat gcacttggcg tagcagccgc cctcgaaatt gaatacccca
     1081 ttcggacccc aaccgtgttc gtcatccccg atcaggatcc gggttgaatc ggcggacagg
     1141 gtggttttgc cagtgccgga caagccaaag aacagtgcga catcgccgtc cgcgccgaca
     1201 ttcgccgagc agtgcatcgg catcacgctc tcggccggca gatagtagtt gagcgtagtg
     1261 aagactgact tcttcatttc gccggcataa tagctaccac cgatcaggat catccgcttc
     1321 gtgaagtcga tcgctatgac ggtttcgctg cgtacaccat ggcgtttggg atcggccttg
     1381 aaggacggca ggcacaggat ggtgaaatcc ggcacatagt gcgaaatttc gcaacggtcg
     1441 ggccgaatca gcagcgtgcg aatgaacaac gaatgccaag ccagttcggt aaacacgcgg
     1501 gccttaatgc gatattgcgg atcggcgccg ccgtagaggt cctggacgta aagctgcttg
     1561 cccttcgcgt gctcgaggaa atccctgtgc agaagttcga actgagccgg ggtcagtttg
     1621 ccgttcttgt cccaccagat ggtcttttcg gtgtgctcgt cgcagaccac gaacttgtct
     1681 ttggggctgc ggcccgtgtg gacaccggtt tcggcgcaca acgcgccgcc ttggactaaa
     1741 tgggcttcgc ggttggcgag cgcatgttcg taaagcggcg ccgcggtcaa attccaatgg
     1801 accccggcaa gacccgaaaa tccaaactta tcggcgccat gggcgctgtt ccgcaaacct
     1861 gtctcttcca cggcagccct ccgcataaac ccagttgttc atcgccgttc cccgccagcc
     1921 cagggattgg cagtgatccg gaagctactt cacatccgga tcccggggcg gcgcacctat
     1981 aacggccccc ggtagccctg ccaagattaa tcctctcgga gggtttatga tcccaagtcc
     2041 atccaaatat ccggttgtcg gtttaattgt caggtaaggt ctacgtgctt aagcgcaggc
     2101 cctgagacac gtcgcgaacc gcgaaaagca ctcgtgaggc atttggacgc agcagtaatg
     2161 tgcataactg tgccttttca gtgacagacc tccagccacc cacggtagcg cacgataagg
     2221 ccgatgaacc gatagcggag ctcgacgaag aaccgaaaac ggtcggcttc ctcgcattca
     2281 taggcctcgc atgtcggcgc gagccatagc ggtagcggca ctccaaacac gctccagcac
     2341 cttacaacga accacaaccg ggcattgtcg acaaccagtg cgagaccgaa ggcgcatggg
     2401 ccgaaccgct cgcacagctg ccgatcaaat cgcgcccgtc ccgcttcctg gatgctggaa
     2461 aacagctgcc caccgaaatt gcgttgccac acctcgcgat caccgtcgcg gcgaaaatcg
     2521 acgacgaccg gaatgtcatc accagccggc ggaaagccga aaatcttagc gatgcgacga
     2581 gcaatccatc cgtcgccgcg atccacggtc gcgcgtccct tggcaacgta tttgctgtgg
     2641 aaatcatgca ggcagcgcac agatggcggc aacgtgtcat acgcggcccc aaggagccgt
     2701 cggtacaggg acgatggctg cggtgagatt tcccgaacac cgctgcatat tcgccgccgc
     2761 gcgaattgcg tttcgtagtc ggcaagaagc acgtcggcgg tgccggaccg cgcgcccgcc
     2821 gccggtcggc ggccatcgag aatccgacgc acgatcgcgg ccgccgccat cgagggtatg
     2881 aacggaccat cgtcgccctc ggcgatcata tgccactcgc ggacaatccg gccaccatcg
     2941 tccgcggtac cggcgactgt aacgaacatg ccgccgcgat gttctcccca gcgcaacaac
     3001 cggctcgcgc gatgcatcca cacggcgaaa ggccccaggg tgctgaccat gtctaggcgc
     3061 accagccacg ccaacagacc caaggcgtga agcaggaaac ccggcacagt accggcgccg
     3121 atccacaccg tccgcaacga cggaaacaac gccggcagcg ctgccagatc cgggacatcc
     3181 accaacgtga agcgtcgcgg ccgaagcggc agtgacccgg gcggcgcgat ggtgaaatgc
     3241 tgcgcgtcgt gaagcgcatg ggcggtcgct ttgcgcccat cgcgcaggat agcaatcggc
     3301 tttccggcat agctcgctat ggcgcgaaag acgttgaccc cgatgtccgc aaagggagac
     3361 ggcgctacgc cggccgtcat cgtctcgacc cgggccatgt cacgcgacag cgtgcgcagg
     3421 acagcagccg tcagagccgg aaaactgctc acgccagaaa gcacgaatag gtcacgcgtt
     3481 ctcgcttcct ggtcgaaggc cgcaatgcca ttgacgaaag cagaggcgtc ggcgaggtcc
     3541 agataatgaa tgttgagggc tatgcaggct ttcacgaccg catacggatc gtcgccatag
     3601 gcttggaacg gccccgacgc gtcgatcact atttcgggcg ttatatcgcg cagttgcgcg
     3661 agcacataac cgtcacgatc gaaaccgtgt ggttcgagtt tggccacccc gctgagccca
     3721 gcgcagaagg tcttcgctcg ttcatacgat cgaccggcga tcaccagtgt aagccgctcc
     3781 tcttcggcca acatctgtgc gagccgacca ccgaaattcc cgtatccacc gagaatgaga
     3841 atcctggtca tgtgagaaac cgatccgcat accgaggatc ggacacataa cagacgtcgc
     3901 gcctgccgaa gatgcgcagt cgattgcgtg caatcacatc gtaaaaggct tcgcgccacg
     3961 ccgacggcag caggcgaaac agagtcgcga gccgccacgg gaagccgagc tgctcggcca
     4021 tgcggatgct gccctccgcc ttgaaccagg caatgccggc cgccagtaga atgttggtct
     4081 cgtactcgat tggatcgagt tcatagtgga catacagtgc acgtccgaga gcagattgcg
     4141 ctggcacgag gcgaagaatc ccacggcggt cgtggcgcag caggaatcga gcaaatccgg
     4201 agcacatcac gcaatggcca tcgaatatga cgatcggccg gtcatcgggg aattccggca
     4261 ctgccgggtc acgacgataa ctgtagggct cgcgcacggc cgttccgtca ctgcgcccgc
     4321 gctcgggctc cccattcgac gagggccttg cgcaacgcga caccgttcgt cacacgctct
     4381 gcaaagaaca tccgcgcagt gcgatcgccg agggcaaggt caagcccctc ggggtcgaca
     4441 ccggtgactt gccagtcgcc atcggtttcg ctgagcagct tggttgcgta tagccgcacc
     4501 gcatcgcggt gatcggcatt catgtggtcg accgcactct cttcgatctc gatgatttct
     4561 gctgcgtctt caagattggt gacgatgtcg ctcgccttaa gatctgccgc ccgggcgaat
     4621 ccaccgttga aatgcgccga cacaacatgc aatcgccaga atgtgaaatc gccgaaatcg
     4681 gcatagagtt tggatttcgg gtggcgagac aggaaacgtc gttgcacccg catgccgtct
     4741 ggcgtgccac gctcaatgtt gacgaaggtg cccaatacgg tgagccgcgg atgggcgaga
     4801 ggatcacctt tcccggtgga tgcaagcaac acagaagcgc ggggatctac ctcgatattg
     4861 gccgtgtggg tggacaatcg cgataccagg atcaggggcg atccatcgac atcagtcgca
     4921 atattgacga gggaggaaaa cgggtaacca ccattgcggt cgatcgtggc aagcgcgccg
     4981 gcccgcgtgg cccgcaacag ctctttcgca atggcgacgg gattaaaatc atctggcgga
     5041 cgggcggtct cgggcagccg gtcgggcata attcccggta aagccacagt tttgtctgct
     5101 tcaaccacag cgtgttgacc ttctaaattg ttcgacacgg atcaattttg tcatttattg
     5161 tcacatttcc gcccccctga gggggcttgg taacgcaatc ttgggctggt ggctccgcgt
     5221 ttcatgctag aaagcatcca tggcaactat cgctctcgtc gacgatgacc gcaatatcct
     5281 cacttcggtc tctatagcgt tggaggctga ggggtaccgg atcatgacct atacggatgg
     5341 ggcttccgcg ctcgacggct tcaagtcaag ccctcccgat ctcgccattt tggatatcaa
     5401 gatgccgcgg atggacggca tggagacgct gcgccgcctg cggcagaaat ccgatatgcc
     5461 ggtcatcttt ctcacctcca aggacgagga aatcgacgag ttgttcggcc tcaagatggg
     5521 tgcggacgac ttcatccgaa aaccgttctc gcagcggctt ctggtggaac gcgtcaaggc
     5581 tgtgttgcgc cgttccggtg gcaaggatgg cgcggtacct aaagagaccg atgccgctaa
     5641 ggtgctcgag cgcggccagc tcaggatgga cccggaacgc cacacctgca cctggaagaa
     5701 cgaacccgtc acgctgaccg tcacggaatt cttgattctg caggcgctcg ccacccggcc
     5761 cggtgtggtc aaaagtcgca atgccctgat ggatgctgcc tacgacgatc aggtgtatgt
     5821 ggacgaccgt acaatcgaca gccatatcaa gcgcttgcga aaaaagttca agcaggccga
     5881 agactctttt gatatgatcg aaacacttta tggggtgggt taccggttca aggaatagcc
     5941 gcttttcaaa atcctccgca gcgacgccca tcttaaactg gtgggcgcgt acgcgcggct
     6001 gcgatagagt gcagcctaag cttggggtgg agcttatgag aagccttcga cgtgcttgat
     6061 aagaccttag acatcgatga cgtgcacgct ggatcggccg gttcaggtga cacgcgtttg
     6121 agggacggcg ggttggcctc ggcggccgtt aagcgcttac gccaacttgg catcgcatgg
     6181 gagcgcgccc gcctcggaac tggcgatttc ttccttcgca cctggaaggt cctgcgcacc
     6241 gagggtgcgg tgggcgtgtt gcgccgcacg tggcatttct ttgtcagtca gagttcttcg
     6301 agccttacgc gtcgcatcgt cattctcaac atcgccgggt tgctcgcctt cggactgggc
     6361 atcatttacc ttacccaatt ccgagccggc ctgatcgatg cgcgggtaca gagcctgatc
     6421 gttcagggcg agctcatcgc catcgcggtc gccggccaag cgacggagtc tgacgccatc
     6481 aacgtcgatc cggaacggct tttggaactg caggcgggtg aaagctatgg cccttccgat
     6541 aacacgcttt tcggtttcga atttcccgtc aaccctgagc gggtggcgcc gctgctgcgg
     6601 cggctgataa cgccgaccaa tacgcgggcg cgaatctatg accgcgacgg cacgttgatc
     6661 ctcgacagcc gcaacctcta tggccgcggc gacgtcctgc gttttgacct gccgccgccg
     6721 actgcggaac ggccgggaat tgtcgaacgg acctacatcg cgatccgtac gtggctcggt
     6781 cgcggcgact tgcctcccta tcgcgagatc gggccggaga atggtaaggg ctatccggaa
     6841 gtcgcccagg cgttggacgg acaaaaggcg agcgtggtcc gcatcaacga tcgtggcgag
     6901 gtgattgtgt tggtcgcggc accgattcag cgtttccgca cggtgcgcgg tgccttgctg
     6961 ctgcaaacgc aaggcggcga tatcgatcag acggtcgagg cggagcggct agccattctc
     7021 aaggtattcc tagtcgcagc cggcatcatg tcggccttct cgatgttgct cgccggcacc
     7081 attgcgggcc cggtgcgtcg gcttgccgac agcgccgatc gggtgcgccg ccgcgtgagg
     7141 ggacgcgtag aaattcccga tttcacccga aggcgcgatg aaatcgggct cctgtccggc
     7201 aatctgcgcg aaatgactag cgcgctttac agtcgtatcg aggcaatcga aagttttgcg
     7261 gccgatgtgg cgcacgagct gaaaaatccg ctgacttcac tgcgctccgc ggtcgaaact
     7321 ttgccgctgg caaaaaccga ctccagccga agccgattgc tagccgtcct caagcatgat
     7381 gtgcagcggt tagaccggct gatttccgac atttcggacg cgagccgcct ggacgctgag
     7441 ttgcagcggc aggaagcagc accggtcgat ttacagaagc tgttatccgc agtcgtgact
     7501 ttggcaaacg aaatcaaaca cgaagacggc gtcaccgtgg ccctcatttt cgagggctcc
     7561 ccacgcattt tcatggtcca aggtcatgat tcccggctca gccaggtgat caacaatcta
     7621 atcgacaatg cgcgctcatt ttcgcctccc gacggtaagg tgcgggttac ctgtcggcgt
     7681 tcaggcccgg aaatagttac cacagtcgat gatgacggtc ccggcatccg gccagaagct
     7741 attgagaaga tcttcgagcg gttttatacc gatcgaccgc agcagaattt cggccagaat
     7801 tcaggcctcg gtctgtcgat ctcaaagcag atcgtggagg cccatgatgg ccgattgtcg
     7861 gcgcagaacc gcgtggcgcc agtgggctca ctggccaacg ccaagggcga cgatcagatc
     7921 atcgaggagc gaattcttgg cgcacgcttt gttgttcgac tgccggcgat gtaggcatta
     7981 gtgaacgacg cgcctaccat tcatgcctca gcagtgctga caggcgcgcg agctattttg
     8041 attcgcggcc ccgccgggtc gggcaaatcg cgactggcgc tcaacctcat ccaggctgca
     8101 tcgaacggcc tgttggtgtt tgcgcgtctg gtggcagacg atcgcgtcca tgttcacgcc
     8161 gcccatgacc ggctgattgc gcggccgcca gcggcgctcg cgggtcttct ggaggtgcgc
     8221 ggcctcggaa ttcagcaagt gcaatacgag ccgatggccg tcgtctcatg ggtggtggat
     8281 ctccatgtcg ccacagcgaa gcggatgccc gatagcgccg aaacccgaac tgttatcgca
     8341 ggcgtcagta ttcgatgctt ggcggttgct gcaggttgcg atcccgttcc gatggtgctt
     8401 gctacagtca catcgcctca ctaccttttc cggggcggct catagctctc tcgcttggcc
     8461 gggcggatag tggacaattc attcacccgt tcggctgccg gcagtcaagc gtgatagtcc
     8521 gcgtttcggc agtttggctc ctcccgagat cagcacacat gtcggtccat aacaatctcc
     8581 cgaaaagttc ttgcgctcga gcttgggata gtcatgattg gagcgatttc gggcggcgca
     8641 ccgacagcgc tcgccgggtg attcgatgat aggtcttgtt ctcgttaccc acgggcagct
     8701 tgccactgag ttccgctctg ccctggaaca tgttgtgggc ccccagaagc agatcgagcc
     8761 gatcacgatc ggacctgacg acaatgtcga acagcgccgt cgggacatca ttgaagcggt
     8821 aaagaaggtt gataccggtg atggggtggt aatcttgacc gacatgttcg gcggcactcc
     8881 ctccaacctc gccatttcgg tgatgagtcg cccaaatgtc gaggtcttgg ccggaatcaa
     8941 cttgccaatg ttagtcaagc tggtgaaggt gcgggacgaa tgcccactgg ctgaagcggt
     9001 cgttgcagcc caggaatcgg ggaggaaata catcaccatc gcgagccgcg tattggcggg
     9061 caaatgaagg acacgcccct agccggtgag gacgactgtt ctcccgactt ggcggcgatc
     9121 ccgcccgacg cgatcgtgcg ggcgttgaaa atcgtcaatc agaagggatt gcacgccaga
     9181 gcgtccgcta aatttgtcca gacagtggaa aaattcgatg ccgacgtgcg tgtcagccgc
     9241 ggcagcgagt tcgttggcgg cacgtcgatc atgggtctta tgatgctcgc cgcgggcccg
     9301 ggcagcgaaa tcaccgtagt ggcttccggc aaggaaaagg cagaggtgct ggccgcgctg
     9361 gaacttctgg tgaacgggcg gttcggcgag gacgattgac caagaatctt agcgcagcaa
     9421 gctgcggggt ttcacgccgg agataggcgc tgaggcgtgt tggcgccgat atgaatctga
     9481 ttgcgggttt ctctgccgtt cgatgtattg gcgaatgatg ctgatgggcg caccgccaca
     9541 ggatgcagca agatagcttg gcgaccacag aacgcctttg cggtatcgcg gccgcaaggt
     9601 cgggtgcatt tggcgcatgc ggcggctcga cacgcccttg aggctgttga caagttttgt
     9661 gagaggaatt ttcggcggat agttcacgag taa
//
LOCUS       DATILV010000866         2900 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_5065493, whole genome shotgun sequence.
ACCESSION   DATILV010000866 DATILV010000000
VERSION     DATILV010000866.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2900)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2900)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2900
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5065493"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1198
                     /locus_tag="VLJ17_21010"
     CDS             <1..1198
                     /locus_tag="VLJ17_21010"
                     /EC_number="1.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018316425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016638 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FMN-binding glutamate synthase family protein"
                     /protein_id="HSV25493.1"
                     /translation="AAVPFRVRIGGPGCQQPYDASVFNISAMSFGALSPNAIRALNKG
                     AKAGNFAHDTGEGGYSVYHREHGGDIIWEIGSGYFGARNSDGTFSPERFVESATLDQV
                     KMVELKISQGAKPGHGGVLPAAKVSEEISRNRGVPIGQDCISPSSHSSFTTPIGMMEF
                     IGKMRRLSGGKPAGFKLCVGHPWEFLAVCKAMLATGIYPDFIVIDGKEGGTGAAPLEF
                     VDHIGMPLREGLNFVHNALIGINARERIKLGASGKIVSGFDIARAMALGADWCNAARG
                     FMFALGCIQSQSCHTDKCPVGITTQDPTRQRALVVDDKWVRVKNFHVATLQALAEMVA
                     AAGLDHPNEFMPMHFSRRVSPREVVSFDKLYPGLQPGELLDGTDDPRFRDAWKMASAE
                     SFRPAQ"
     gene            complement(1300..2106)
                     /locus_tag="VLJ17_21015"
     CDS             complement(1300..2106)
                     /locus_tag="VLJ17_21015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018319660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate dehydrogenase"
                     /protein_id="HSV25494.1"
                     /translation="MTETRVAIAGLGAIGCAVARRLADGMPGLALACAAARDVAKAKA
                     WLDKMQISCPLVGLEEFPHYADLTVECAPAEILEEICTPMLTAGKRVMVLSAGALLPR
                     PHLIDLARRHGGQIIVPTGALLGLDAVAAAAEGTIHSVRMITRKPPRGLAGAAYLVKR
                     GISVEGLNTAKRVFAGTAREAAAGFPENVNVAAALSLAGIGPDRTTIEIWADPTVTRN
                     CHSIEVDSDSARFSFSIENIPSDNPRTGRITALSVVAALRKLNAPLRVGT"
     gene            complement(2199..>2900)
                     /locus_tag="VLJ17_21020"
     CDS             complement(2199..>2900)
                     /locus_tag="VLJ17_21020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25495.1"
                     /translation="APLKAGVHVYRAVLATHEKDAVLHEGTSSEFSFIATAHAASVNV
                     WGLPSAIAAGEHFRFKVGIKCSAGCKLTGRQLSIFDHEGAQVGAASLLDDVWAGTSAL
                     YFAEVEAQAPFVTGDYQWQVAAPASDMSVPHAAGSCTFAVKVVSPSDHEVTVEAFDSE
                     KQTPIKGAHVLLHPYRALTNEAGVAKLEVTKGTYKLFVSGFNYIAYENIIDVGGHVTV
                     RAELTMEPEGQEDYR"
BASE COUNT          550 a          907 c          884 g          559 t
ORIGIN      
        1 cgcggccgtg ccgtttcgcg tcaggatcgg ggggcctggc tgccaacagc cctacgatgc
       61 gtcggtcttc aacatctcgg ccatgagctt cggcgccttg agccccaacg ccattcgggc
      121 cctcaataag ggcgccaagg ccggcaattt tgcccatgat accggagagg gtggttattc
      181 cgtttatcac cgcgagcatg gcggcgacat catctgggaa atcggctcgg gatatttcgg
      241 cgcccgcaat tccgacggta ccttttcacc ggagcgcttt gtggaatctg ccacgctcga
      301 tcaggtgaaa atggtggagc tgaagatcag ccagggcgcg aaaccgggcc acggcggcgt
      361 gctgcccgcc gccaaggtct ccgaagaaat ttcgcgtaac cgcggcgtac cgatcggcca
      421 ggactgcatt tccccatcca gccattcaag cttcacgacg ccgatcggca tgatggagtt
      481 catcggcaag atgcggcggc tgtcaggcgg taagccggcc ggcttcaagc tttgcgtcgg
      541 gcatccgtgg gaattcctgg ctgtctgcaa ggcgatgctc gccactggga tttacccgga
      601 tttcatcgtg atcgacggca aggaaggtgg taccggtgcg gcaccgctcg agttcgtcga
      661 ccatatcggc atgccgctgc gtgaaggcct caatttcgtt cacaatgccc taattggaat
      721 caatgccaga gaacgcatca aactcggcgc tagcggcaag atcgtttccg gcttcgatat
      781 cgcccgcgcg atggcgcttg gtgcggactg gtgcaatgcg gcgcgcggat tcatgtttgc
      841 gctcggctgc attcagtccc agagctgcca taccgacaaa tgtccggtcg gcattacgac
      901 ccaagaccca acccgccagc gcgctctcgt tgttgacgac aaatgggtgc gggtaaagaa
      961 tttccacgtc gcgaccctcc aggcgcttgc ggagatggtc gccgcggcag gcctcgatca
     1021 tccgaacgaa ttcatgccga tgcatttctc gcgccgcgtg tccccacgcg aggtcgtgag
     1081 ctttgataaa ctctaccccg ggctgcaacc cggcgaactg ttagacggca ccgacgatcc
     1141 gcgattccgc gacgcctgga agatggcgag cgcagagagc ttccgaccag cacaatgacc
     1201 gccgaaagct ggacggcaac tgcgatgctc tcaaggcgag cgtaggccgg gttcacatcc
     1261 gtgatcagta aaacccgtcc gcattcgtcg catgatctgc tatgtcccca cacgaagcgg
     1321 agcgttgagc ttgcgcagtg ccgcgacgac ggacagcgca gtgatccgcc ccgtcctcgg
     1381 attatccgat ggaatattct cgattgagaa tgaaaaacgc gctgaatccg aatcgacttc
     1441 gatggaatgg cagttccgtg tcacagtcgg atcggcccag atttcgatcg tggtgcggtc
     1501 ggggccgatg ccggcaagcg acagcgcagc cgccacattg acgttctccg gaaagccggc
     1561 ggcagcctcg cgggccgtgc ccgcgaatac gcgcttggcg gtgttgaggc cttcgaccga
     1621 gatgccacgt ttgaccagat aggcggcgcc cgcaaggccg cgcggcggtt tgcgggtgat
     1681 catgcgtacc gaatgaatgg taccttcggc ggctgcagcg accgcatcga ggccgagcag
     1741 tgctccggtc ggcacgatga tctggccgcc gtgccggcga gcgagatcga tcagatgcgg
     1801 ccgcggcagc agcgcgccgg cgctgagcac catgacacgc tttccggccg tgagcatcgg
     1861 ggtgcagatt tcttccaaaa tttcggccgg cgcgcattcg accgtcagat cggcgtagtg
     1921 ggggaactcc tcaagcccca ccagcgggca ggagatttgc atcttgtcga gccacgcttt
     1981 agccttggcg acgtcgcgcg ccgccgcgca cgcgagcgcg agcccgggca tcccgtcagc
     2041 caatcgccgc gcgacggcgc acccgatggc gccgagcccc gcaatggcga ccctggtctc
     2101 ggtcatgata ctcgtctcca gctggcgcaa ggctccctga gcgcgccgcg ccttctcggc
     2161 agcgtttgtg tcaccgccgc gcttcgttgc gccggtcact aacgataatc ttcttgcccc
     2221 tcgggctcca tggtgagttc ggctcggacc gtgacatgcc cccctacatc gatgatgttc
     2281 tcataagcaa tgtaattgaa gccggaaacg aagagcttgt acgtgccttt agtaacctca
     2341 agcttcgcca ccccggcttc gttggtgagt gccctgtagg gatgcagaag gacgtgcgcg
     2401 ccctttatgg gggtctgctt ttcgctgtcg aacgcctcca ccgtcacttc atgatcggaa
     2461 gggctgacga ccttgaccgc gaaggtgcat gagccggccg catgaggaac gctcatgtcc
     2521 gatgcgggag ccgcaacctg ccactgatag tctccggtca cgaacggagc ttgcgcttcg
     2581 acctcggcaa aatacaaggc gctggtgcct gcccacacat cgtcgagcag gcttgcggct
     2641 ccaacttgtg caccttcatg gtcgaagata ctcaactgcc tgccggttag cttgcatccg
     2701 gctgaacatt tgatgcccac cttgaacctg aaatgttcgc ccgccgcgat ggcggacggc
     2761 aagccccaga cgttcacgct ggccgcgtga gccgtagcta taaaggagaa ctcagacgag
     2821 gtcccttcgt gcaacaccgc gtccttctca tgagtggcga gcacggcccg gtagacatgc
     2881 acgcccgctt tgagaggtgc
//
LOCUS       DATILV010000867         3463 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2256324, whole genome shotgun sequence.
ACCESSION   DATILV010000867 DATILV010000000
VERSION     DATILV010000867.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3463)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3463)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3463
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2256324"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..622
                     /locus_tag="VLJ17_21025"
     CDS             <1..622
                     /locus_tag="VLJ17_21025"
                     /inference="COORDINATES: protein motif:HMM:NF024739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSV25496.1"
                     /translation="GAYLFVPMWDTDRIKFEGKSWKDVINAVPAGRISIGDVSKSVAY
                     LATYAGQREVLDMNYFRAVAAMKPSFLIRSEQIAGRLVTGEDLMAFSGMPTRAYQYNQ
                     KGGKLKFMLPEEGSVLLPQSMFILKKAPHPNAAKLWVDFILSEEGQTILVKAEALVSG
                     RTGFKSPLPEYAPGIDSLNLINVDWQGLSSEKLKGLRDEWTGVFNP"
     gene            850..2133
                     /locus_tag="VLJ17_21030"
     CDS             850..2133
                     /locus_tag="VLJ17_21030"
                     /inference="COORDINATES: protein motif:HMM:NF024792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein TadG-related protein"
                     /protein_id="HSV25497.1"
                     /translation="MINRIQIAATTALRRLRANQDGAVMPSFVLSLLPVLGLAGAVVD
                     YTRVAEVRTSLQMSLDAALLAGAQDGSTGWSNVALNYFNANIRVTDASVATPTFALDA
                     NRAYTGSASAVVATKFGRILGVSSVNVGAQGVAAMTSSSGNYYCVMALNPSAQAALQL
                     TGNSSITIRAPKCVLQVNSKDSSAVTMNGNSTIQDIENCFVGGLQKVGNAAIQPAPDA
                     KCKAIPDPFAKYPRPAFGQCDYTNFKLSGNKTATLQPGVYCGGMDFNGPVNVTFAPGL
                     YVLKDGIVRETGGTFTGIGVTFFLTGAGASVQMSGQADWHLVAPVAGGAGMPGFAIFL
                     DQNGPSGLPASSSQLSGQAELYFEGIVYLPGQAVAVTGNAQEVAPSPYTSYIGDTLSF
                     VGNAELIINNDTSLTALPIPTALYVQTNGRLALTQ"
     gene            complement(2233..2748)
                     /locus_tag="VLJ17_21035"
     CDS             complement(2233..2748)
                     /locus_tag="VLJ17_21035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSV25498.1"
                     /translation="MSMGERFALAAAAALLANAAIAADGPGLGKPISEAELALWDMSV
                     GPDGKGLPPGSGTAAQGAAIYAQKCEACHGKDGEGGRNATLANAPGKSERTMALYVPN
                     ATTIFDFTRRAMPWPQPKSLTNDETYALTAYILARNKVIGENEVMNAETLPKVAMPNR
                     NGFVSRYPEKH"
     gene            complement(2735..>3463)
                     /locus_tag="VLJ17_21040"
     CDS             complement(2735..>3463)
                     /locus_tag="VLJ17_21040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003612382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HSV25499.1"
                     /translation="LLEETGIDPKAKWLLAEGADGPSMNRSIPIAKALDDAMIALYQN
                     GERINPAQGYPMRLLVPGYEGNMNVKWLHRIKLIEEPVMAINETMQYTYRVAGPKIWQ
                     FFFPMEVKSFVTHPSPGLTLKGPGFYEISGLAYSGNGRIAKVMVSADGGKSWAQAALD
                     APVLSKALTRFRMPWRWDGQPVVLQSRAWDEAGNAQPTRAEMFAERGEPKVNVPVTAF
                     PMGHMNVITTWAIDDKGEAKHVYG"
BASE COUNT          669 a         1020 c         1030 g          744 t
ORIGIN      
        1 cggcgcctat ctgttcgtgc cgatgtggga caccgatcgt atcaagttcg aaggtaaatc
       61 ctggaaggac gtcatcaacg ctgtgccggc cggtcgtatc agcattggcg acgtgtcgaa
      121 gtctgtggcg tatctggcga cctatgcggg tcagcgcgaa gtcctcgaca tgaactactt
      181 cagggccgtt gccgcgatga agccgtcgtt cctaattcgc tctgagcaga tcgcgggccg
      241 cctggtgacc ggggaagacc tgatggcgtt ctccggcatg cccacgcgcg cttaccaata
      301 caatcaaaaa ggtgggaaat tgaagttcat gcttccggag gaaggttcgg tgctgctgcc
      361 acagagcatg ttcatcctca aaaaggcgcc gcatccgaac gccgccaagc tgtgggtcga
      421 tttcatcttg tccgaggagg ggcaaaccat cctggtcaaa gccgaggcgc tggtgtcggg
      481 ccgcaccggc ttcaagagcc cgctgccaga atatgctccg ggcatcgaca gcctcaatct
      541 catcaatgtg gattggcagg gtttatcgtc cgaaaaactg aagggcctgc gggatgagtg
      601 gacaggggtg ttcaatccgt gaactcggca cgatgggctt ggccaggctt gaccaatcta
      661 tcctcatacc aatgagatcg actcgcgggt aacgaacgaa agggcggacc aagttcatcc
      721 aggccccagg cggccagatt tttgagtcaa atttgcgcaa gtaagagaat acatttttat
      781 gtctaacgtg agcgagtgct taagttgcga gggatattat cacgatgagt ttttcatcgt
      841 gaggatgcca tgatcaatcg aattcaaata gccgccacaa ccgccttgcg ccgcttgagg
      901 gcaaaccaag acggcgccgt gatgccctcc ttcgtgcttt cgttactacc cgtgttgggc
      961 ctcgccggtg ccgtcgtcga ctatacgcgg gtggccgagg tgcgcacctc cctgcagatg
     1021 tcgctggacg cagcacttct ggcaggcgcg caggacggca gcacgggctg gagcaatgtg
     1081 gcactcaatt acttcaatgc caatatccgc gtcaccgacg catcggtcgc aacgccgaca
     1141 ttcgcgcttg acgccaaccg cgcctacacg ggcagcgcca gcgctgtcgt tgcgacgaag
     1201 ttcggccgga tattgggagt ctcatccgta aacgtcgggg cacagggagt cgccgcaatg
     1261 acgtcgagct ccggcaatta ttattgtgta atggcgctca acccgtccgc tcaggcggcc
     1321 ctgcaactca ctggcaattc atcgatcaca atcagggcgc ccaaatgcgt attacaagtc
     1381 aattccaagg actcttcagc tgttaccatg aacggcaatt caacgataca ggacattgaa
     1441 aactgctttg tcggtgggct gcaaaaggtc ggtaacgctg ccatccagcc ggcgcccgat
     1501 gccaaatgca aagccattcc cgatcctttc gcgaaatatc cgcgtccggc gttcgggcaa
     1561 tgtgattaca cgaatttcaa gcttagcgga aataaaacgg cgacgcttca gcccggcgtc
     1621 tactgcggcg ggatggattt caacggaccg gtcaatgtga catttgcacc ggggctgtat
     1681 gtcctcaaag acgggatcgt tagggaaacc ggcggaacgt tcaccggaat tggcgtcacg
     1741 tttttcctga ccggtgccgg tgcatctgtg caaatgagcg gacaagccga ctggcatctc
     1801 gtcgcgcctg tcgcgggcgg tgccggaatg ccgggatttg cgatctttct tgaccagaac
     1861 ggtccatcgg gactgccggc cagttcgagc cagctctccg gacaggccga gctttacttc
     1921 gaaggcatcg tctatctgcc cgggcaggct gtcgcggtga ccggtaacgc gcaggaggtc
     1981 gccccgtcgc cctatacgtc ctatatcggc gacacgctga gcttcgtcgg caatgcggaa
     2041 cttatcatca ataacgacac cagcttgacg gcgttgccga ttcccacagc cctctatgtt
     2101 caaaccaatg ggaggctggc gctcacgcaa tagccggctg acgcctcacg cgccatcgca
     2161 cgcgctgcca ggagccggtg gattgatcca ccggctcctg tgcgtgtcat tgctatcgcg
     2221 gttgcacggc ttttaatgtt tttccggata tcggctgacg aacccgttcc ggtttggcat
     2281 cgccaccttt ggcaaggtct cggcgttcat cacttcgttc tcaccgataa ccttgttgcg
     2341 cgcgagaata taggcggtga gcgcataggt ctcgtcgttg gtaagtgatt tcggttgcgg
     2401 ccagggcatt gcgcgccgcg tgaagtcgaa gatggtggtg gcgttcggca catagagcgc
     2461 catggtccgt tccgatttgc cgggggcatt ggcgagggtg gcgtttctac cgccttcgcc
     2521 gtccttgccg tggcacgcct cgcatttctg cgcgtagatc gcggcgccct gtgccgctgt
     2581 cccgctgccg ggcggaaggc ctttgccatc cggcccgaca ctcatgtccc agagcgcgag
     2641 ctcggcctcg ctgatcggct ttccgagccc aggtccgtcg gcagcgatcg ccgcgtttgc
     2701 aaggagcgcg gccgcagccg cgagtgcaaa gcgctcaccc atagacatgc tttgcctccc
     2761 ccttgtcatc gatggcccag gttgtgatga cgttcatgtg ccccatcggg aaagcggtca
     2821 ccggaacatt gactttgggt tcgccgcgct cggcgaacat ctcggcgcga gtcggctgcg
     2881 cattgccggc ctcgtcccaa gcgcggcttt gcagcacgac cggttgtccg tcccaacgcc
     2941 acggcatgcg gaaccgggtt agggccttgc tgagcacagg tgcatcaagt gcggcctgcg
     3001 cccagctctt gccgccgtcc gccgagacca tgacctttgc gatccgccca ttgcccgaat
     3061 aggcgaggcc agaaatttcg tagaagccag gtcccttcag cgtcagcccc ggcgagggat
     3121 gggtgacaaa ggatttgacc tccattggga agaagaactg ccagattttc ggacccgcca
     3181 cccgataggt gtattgcatg gtctcgttga tggccatcac cggctcttcg atgagcttga
     3241 tccggtgcag ccatttgacg ttcatgttgc cttcgtagcc gggcaccagg agccgcatcg
     3301 gatagccctg tgcggggttg atgcgttcgc cgttttgata gagcgcgatc attgcgtcgt
     3361 cgagcgcctt ggcgatcgga atactccggt tcatgcttgg gccgtcagcg ccttccgcga
     3421 gcagccactt cgccttcggg tcgatgccgg tctcttcaag cag
//
LOCUS       DATILV010000868         3707 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3026634, whole genome shotgun sequence.
ACCESSION   DATILV010000868 DATILV010000000
VERSION     DATILV010000868.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3707
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3026634"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            266..475
                     /locus_tag="VLJ17_21045"
     CDS             266..475
                     /locus_tag="VLJ17_21045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25500.1"
                     /translation="MSFPNGGRHTGVSPYGRPVKLDVPAGAEICVSNEWEIRAETYAQ
                     FARDGVPWPDRDWEVEVDTFCFYRN"
     gene            711..2081
                     /locus_tag="VLJ17_21050"
     CDS             711..2081
                     /locus_tag="VLJ17_21050"
                     /inference="COORDINATES: protein motif:HMM:NF025167.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HupE/UreJ family protein"
                     /protein_id="HSV25501.1"
                     /translation="MITALAISCALVWAPAAAHDIPADVKINAFFKPAGSRLELLVRL
                     PLASLIDTDFPMRGAFLDLARADEPIRGGIKVWLTDNIDVYENGALLEKPRVVAALVS
                     LPSDKSFASLAEARAHVLGPPLSSDLDLYWSQQLLDVLLEYPIRSDRAEFAIDLRVDR
                     LGGTVNTALRFMPPDGTVRAFEFHGSPGLVYLDPRWHQAVLRFVVEGFWHILDGTDHL
                     LFLACLVIPFRRLRPLVIIVTSFTVAHSITLLASAFGFAPAGLWFPPLIETLIAVTIV
                     FMALENIVGSNPDWRWIYAFAFGLIHGFGFSFALSEQLQFAGDHLVTSLLGFNVGVEI
                     GQLAVLFVLVPALNLLFRYVVAERIGIIILSALVAHTGWHWMLDRGAILAKFPFPTLD
                     AAFLASLMRGLMAMLILAALVWLASGFVRRLMQGKDEVAHKALAKVPAPPALPRMWGK
                     DRRERR"
     gene            2637..3533
                     /locus_tag="VLJ17_21055"
     CDS             2637..3533
                     /locus_tag="VLJ17_21055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016846792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25502.1"
                     /translation="MVGGSNLVRGCGVVLGVLAALPLTRPARAVDEIQLYNAEIAEVG
                     QWTIQHHFNYAFNGRKEPDFPGGLVPNHALNATPEFAYGLTDWFELGWYVPWAVDESG
                     RFLSNGFKFRTLFVTPNADKRSFFYGLNFEFDATTPPFSETRFAMEIRPIIGWRTPQW
                     EFIVNPIFDLGFGDPGDVSFLPAARLGRKLSDDLTVSLEYYSDLGRPGAFPSFNEQAH
                     QLFAVVDFKIGDVDVDFGLGYGLTPGSDRFIAKTILTYAIPVAGKSQDDKPSMKAPMS
                     MKSSLRQTSAAQLAGDPFAGMR"
BASE COUNT          622 a         1150 c         1133 g          802 t
ORIGIN      
        1 cctggatcca agacctggat ccaagacctg gatccaagac ctggatccaa gacctggatg
       61 cccgcgaaga tgggtttccc gccgcgcgag gtgggtgtct gtgcgcgggc atgactcgcg
      121 gatgtgactt ggctacccgg aacgtgccct catgcttccc ggttgcatgc gcagcttgat
      181 agcggcggta gcaatagctg tcgcaacgat catcgcctcc tatgcgtccg cacaaacgtg
      241 cttgcggcca aagtggaccg agtgcgtgtc gtttccgaat ggaggtcgcc ataccggcgt
      301 atctccctac ggcaggcccg tgaagctgga tgtgccggcc ggggccgaga tatgcgtgag
      361 caacgagtgg gaaatccgcg ccgaaaccta cgcacaattt gcccgcgacg gcgtgccgtg
      421 gcccgatcgt gactgggagg tggaagttga caccttctgc ttctatagga actgagaaac
      481 tgaaacgttt tcggttagat caacattcac tatgctgtta tcgcccggct tgaccgggcg
      541 atctcgttgc caccgaccag tggatactgg attgcctggt ggcaatgaaa cgataggatc
      601 ggcccagcgg agaatggctt gcgctggcgc gcgccttggc agtgtcatgg cggactatga
      661 aggtacatcc tttgaatggt gttgtgccgc cgcggcggtt cgttgcggcc gtgatcaccg
      721 cactcgcgat ctcgtgcgcc ttggtctggg cccccgccgc cgcccacgac atcccggccg
      781 acgtcaagat caacgccttc ttcaagcccg ccggcagccg cctggagctc ttggtccgcc
      841 tccccctcgc ctcgctgatc gataccgatt tcccgatgcg cggcgcgttt ctcgacctcg
      901 cgcgcgccga cgagccgatc cgcggcggta tcaaggtttg gctcactgac aatatcgacg
      961 tctacgagaa cggcgccctg ttggaaaagc cccgcgtcgt tgctgcctta gtgtcgctgc
     1021 cgtcggataa atcctttgcc tcgctcgcgg aggctcgcgc ccacgtgctg gggccgccgc
     1081 tctccagcga tctcgatctc tactggagcc agcaactact ggacgtgctg ctcgaatatc
     1141 cgatccggtc ggaccgcgcg gagttcgcca tcgacctgcg cgtcgaccgg ctcggcggca
     1201 ccgtcaacac cgcgctgcgt ttcatgccgc cggacggcac ggtgcgcgcc ttcgagttcc
     1261 atgggtcgcc cggccttgtc tatctcgatc cgcgctggca tcaggcggtg ctgcgcttcg
     1321 tggtcgaggg cttctggcat attctcgacg gcaccgacca cctgttgttc ctcgcctgcc
     1381 tggtgattcc gttccggcgg ctgcgcccgc tggtcatcat cgtcacgtcg ttcacggttg
     1441 cgcattcgat cacgcttctc gcttcggcct tcggcttcgc gcccgccggg ctgtggttcc
     1501 cgccgctgat cgaaaccctg atcgcagtca ccatcgtgtt catggcgctt gaaaacatcg
     1561 tcggcagcaa ccccgattgg cgctggatct atgcgttcgc tttcggcctg atccacggtt
     1621 tcggattttc gttcgcgctg agcgagcagc tgcagttcgc cggcgaccat ctggtcacct
     1681 ccttactcgg cttcaacgtg ggggtggaga tcggtcagct cgccgtgctg ttcgtgctgg
     1741 tgccggctct caacctactg ttccgttatg tggtggcgga acgcatcggg atcatcatcc
     1801 tgtcggcact ggtcgcccac acgggatggc actggatgct tgaccgcggt gcaatacttg
     1861 ccaagttccc cttcccgact ctcgacgctg ccttcttggc aagcctgatg cgcggcctga
     1921 tggcgatgct tatcctagcg gcgctggtgt ggctcgccag cggcttcgtg cgccgcctca
     1981 tgcagggcaa ggacgaagtt gcccacaagg cgctggccaa ggtaccggcg cctcctgccc
     2041 taccccgcat gtgggggaag gacaggcgtg agcggcgatg aggcggtcaa tgtcgcccat
     2101 gcgctcatcg ctgacagcga gatcgcgcta acagcccgcg ttgccggggg cctgcgccag
     2161 cctgtcgatg attgcgaggg ccccgaagca ggttctgcgc gaccaaccga taagcgaacg
     2221 ccgaaccctc tggcgccatt tcgtattccg ccgcggaacc ggcgccaagc gttgcattgc
     2281 ggtcgctcat gccagggcat gcgcgtcggc gacttagagg gttcgcagcg tctgtgccaa
     2341 aaccgcaaca cattcccggg aaaatgtcac agcttcccct gaatgaattg gaattgttct
     2401 gcttgctaat ttagaattat tccaaaggtg ccgaggtgcg ccacgagggc aggtttcggc
     2461 gggatggagc ctatattgtg ggccttgccc aattttcggt gccattcccg caaaagcggc
     2521 aatccggcac tccaaagggt cgcccgggtt actggatcgc gcgcttttgt gggcggtgac
     2581 ccgataggtt ggttccatca gaacgaaatc cgctcgaggt tgctcgggga atgacgatgg
     2641 tgggcgggtc aaatcttgtg cgcggttgcg gggtcgtgct cggcgtcttg gccgcactgc
     2701 cgcttacgcg ccccgcccgc gcggtcgacg aaattcagct ctataacgcg gagatcgccg
     2761 aggtcggtca gtggaccatc cagcaccatt tcaactatgc cttcaatggc cgtaaggaac
     2821 ccgatttccc gggcggactg gtgcccaacc acgccctcaa tgccacgccg gaattcgcat
     2881 atgggttaac cgactggttc gagctcggct ggtacgttcc ctgggctgtc gacgaaagtg
     2941 ggcggtttct gtccaacggc ttcaagttca gaacgctgtt cgtgacccct aacgccgaca
     3001 agagaagctt cttctacggc ctcaatttcg aattcgatgc cacgacgccg ccgttctcgg
     3061 agacgcgttt tgcgatggag atccggccga tcattggttg gcgcactccg caatgggaat
     3121 tcatcgtcaa tccgatcttc gacttaggat ttggcgatcc gggcgatgtg agtttcctgc
     3181 cggccgcgcg gctggggcgc aagctcagcg atgacctcac tgtttcgctg gagtattaca
     3241 gcgatctcgg tcggcccggc gcctttccct ccttcaacga acaggcgcat caactgttcg
     3301 cggtggtcga tttcaagatc ggtgatgtcg acgtcgactt cgggctcggc tacggcttga
     3361 cgccgggctc ggaccggttc attgcgaaaa ccatcctgac ctatgcgatc ccggtcgccg
     3421 gcaagtcgca ggacgacaag ccgtcgatga aagcgccgat gagcatgaaa tcgtccttgc
     3481 gtcagacctc ggccgcccag ttggcgggcg atccgttcgc cgggatgcgg tgattgcgat
     3541 cgtgcctgga gacggccatt cgtgatgacg tcttcggcta catgctgcat gttatcgaca
     3601 tcgcaacaaa caaggtgttg gcggcgaccg accggcgcga gccgtgtgat gtgcttagtc
     3661 ttttggaccg tgcctttgag agttctgacg aacatgtccg ccgccgc
//
LOCUS       DATILV010000869         8483 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_723687, whole genome shotgun sequence.
ACCESSION   DATILV010000869 DATILV010000000
VERSION     DATILV010000869.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8483)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8483)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8483
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_723687"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1030
                     /locus_tag="VLJ17_21060"
     CDS             <1..1030
                     /locus_tag="VLJ17_21060"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HSV25503.1"
                     /translation="ASITVTINEETVVAAATGDGIYSLSSKKFSDRGLIELVFDIKAK
                     EADDLLIGKMMLAGSDRNQGTADAASWYGRLWSYARHSAEDHLILIGLILLFGLALGR
                     ALGRRRIRALPILVLAVLGSAVAVTGRPVHAHEGHDHDAAISVPAGDIARRLPDGRVF
                     VPKPTQRILDVRTVVAKTETVPKAVVLVGRIIADPNRSGLVQSINGGRVIAPEQGLPR
                     LGQTIAKGDVLASVEPPMGMADRTTISERMGELEQMIAVAEAKLKRLRPMAERQVMPQ
                     SLVIETEAELAGLHRRREVVRETRIAPEILRAPIDGVVATARVVAGQVVQAQDVLFQI
                     VDPNSIWV"
     gene            1103..1447
                     /locus_tag="VLJ17_21065"
     CDS             1103..1447
                     /locus_tag="VLJ17_21065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25504.1"
                     /translation="MKLGFQGWSRTLQQQATVLQFAIAAPPPSARVGQPVTVTAQRGE
                     TANGIVVDRDAVVRGGNGETIVWRHVEPEVFEPRPIRTEPFDAMRVLIVAGVAEGERI
                     VVRGAGLINQIR"
     gene            1457..4573
                     /locus_tag="VLJ17_21070"
     CDS             1457..4573
                     /locus_tag="VLJ17_21070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012453796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSV25505.1"
                     /translation="MFNVLVSASLRHRVFVLAAAFILVVYGSLILPRIPIDVFPDLNR
                     PIVTLITEAEGLAPQEVEQLVTYLIESIMNGMPGVTRVRSVSGIGLSIVYVEFDWGTD
                     IFRNRQLVSERLALVRDQLPRGTTPQMGPITSIMGEIMLIAVTSATASPMELREIADF
                     VMRPQLLTIPGVAQVIPIGGEVRQYRVVPNPALMRGLEVTYDQIESTVTRFGTNTAGG
                     FIDQQGREYLIRNIGLTRRLEDLRDTAVAYRDGQPVLLRQVATVEFAARVKRGDAGYR
                     GTPAVILSVQKQPGADTVTLTNQIEAALQSIQKTLPAGISATNVQFRQATFIEASIGN
                     LKTALVEAAVVVALVLIVFLMNVRATLISLTAIPLSILVSLIVFHIFGLTINTMTLGG
                     LAIAIGELVDDAVVDVENILRRLSENRTQPNRRPPLEVIARASQEVRSGILYATVIIV
                     LVFLPLFAMSGLEGRLFTPLGVAYVASILGSLLVSITLTPVLSYYLFARNPRREHDGF
                     LLRHLKRANTALLTWALRERALVFASVAIAVVAATGAAVLLPRTFLPSFAEGTLDVSL
                     AYNPGISLRESSRLGLIAERLLMGIPEVASVGRRTGRAELDEHAEGVHFSEIDVDLKP
                     SSRLREDVLADIRSRLAILPASVSVGQPIAHRMDHMLSGIRAEIAVKIYGDDLDTLRS
                     VAETLRDRLVPVAGLADLQVEKQNRIPQLRVEADHERARLYGVSPAVLTRALEGLSNG
                     RTVSQVVTEGNRRFDVVIRLSDVDRSTTGLGDLLVETPSGHVPLRLVARIDETDGPNQ
                     ILRENGQRRIAVYANTDGVQDRAQIVADIRNVLGATAWPQGYRVTLEGTYQAYEDAAL
                     RIAVLSIASLVLIFLVLQNRYRSSMLALIIMANVPLALIGSVAALWIAGLPLSIASIM
                     GFVTLAGISTRNGILKISRYINLALHEGARFGPDLVMRGSIERLAPVLLTALSAGLAL
                     TPLLRGAGEPGREILHPVAVTIFGGLLTSTLLDAILTPALFLMFGRKPIERLSAARPD
                     ALTPAEIY"
     gene            4597..4971
                     /locus_tag="VLJ17_21075"
     CDS             4597..4971
                     /locus_tag="VLJ17_21075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009796715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25506.1"
                     /translation="MLKSISAALLSTLIASGAMAQSPQKGVNGGDVVVMEGHPIEFVS
                     KGQEIVFYILEDDGKSPTPTKGFEGRAVIQDGGKTFAVNLSPAEPNAFIAQLPMPLGS
                     KARVVFSAKVAGHNLQARFTTN"
     gene            5019..5606
                     /locus_tag="VLJ17_21080"
     CDS             5019..5606
                     /locus_tag="VLJ17_21080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008189335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HupE/UreJ family protein"
                     /protein_id="HSV25507.1"
                     /translation="MIATTRHLVPLALVLVATPAFAHSENGVAIDFWGGFTHPIFGPD
                     HVIAMVAVGLWGAFLGAPAIWLLPVVFPLVMAVGGAIGVAGVPLPGVETGIAISAIAL
                     GGMVALAARPPLWIAAVLVGAFAIFHGHAHGAELPIGADAVAFSMGFVIATGMLHLAG
                     IAFGGLSHWPAGRIAVRAVGGVICLLGFAYLGKFL"
     gene            5603..6208
                     /locus_tag="VLJ17_21085"
     CDS             5603..6208
                     /locus_tag="VLJ17_21085"
                     /inference="COORDINATES: protein motif:HMM:NF016819.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HupE/UreJ family protein"
                     /protein_id="HSV25508.1"
                     /translation="MNRSFPVAILVCLIVSTTPALAHSPIMGIGGVFGGVIHALLIPE
                     HGLGLLALGLVLGRQQQAARRAGLLIFAAGLICGLIGAALTGEEMLAADILLVATGIL
                     GLFVAALWMPPFLALPLAAVAGITFGLDSKPDGISVDEGIRMLVGSGLGAVLALAIAA
                     EGSVYLRGNAPLIAARVAGSWIAAIGIMVLSLRIVTRITVG"
     gene            6401..7348
                     /locus_tag="VLJ17_21090"
     CDS             6401..7348
                     /locus_tag="VLJ17_21090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HSV25509.1"
                     /translation="MQSIGSSVLQHTGYVALPEHRASGGFDHAAVHAASGHVYVAHTA
                     NDAVDVFDPVAQIHLYSIPQLPGVAGVVVSDEAQLIISSNRAENTIGIFPPGPDPQVS
                     KIAVGVRPNGLAYDPVHRQILVANVGDPAVPGSHTLTIVAIDEAAARAEIAVAGRTRW
                     AIFDPEAQVFYVNIADPAEIVVVDARRPRNIASTFAIPSVGPHGLDLDPESRRLFCAC
                     DSGELITLDARSGKVLGQNPLSGSPDVVFFDRVHERLYVAAGEPGTIDVFDTKTMGKL
                     GTVATELGAHTFALAPTGGQIYVFLPRSHRAAIYQAAHT"
     gene            7533..7994
                     /locus_tag="VLJ17_21095"
     CDS             7533..7994
                     /locus_tag="VLJ17_21095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017677027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromate resistance protein ChrB
                     domain-containing protein"
                     /protein_id="HSV25510.1"
                     /translation="MKWVTREHVKVDRVACPWLIRKFIDQQAEFLFVPAEQVMDVAKR
                     EGATPYDVKGVEFGHHGKECSFDALVKKHGLTRDPAVVLLAKIVNGADTDNSLWHQPE
                     AAGLNAIAEGFRHLGFKDDHEIIAAESIVYDALYRYCQEMVRRGKPDGQYR"
     gene            8164..8472
                     /locus_tag="VLJ17_21100"
     CDS             8164..8472
                     /locus_tag="VLJ17_21100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25511.1"
                     /translation="MVARFRRLNAIKARLAALDWAHTPGFEINGLKREGLMAKSSVIL
                     HEIYFESLGGCRDSPLTGLVEPPAGLVQALERDFGSVTGAPRLPPSQRRLRLGDPRLV
                     "
BASE COUNT         1500 a         2644 c         2618 g         1721 t
ORIGIN      
        1 tgcgagcatc acggtcacaa ttaacgaaga aaccgtggtt gcagcggcta ccggcgacgg
       61 gatctattct ctctcctcaa agaaattcag cgaccgaggc cttatcgagc ttgtcttcga
      121 catcaaggcg aaggaggcgg atgatctgtt aatcggcaag atgatgcttg cgggttccga
      181 ccgaaaccaa gggactgcgg atgctgcatc gtggtatggg cgcctctggt cctatgcgcg
      241 ccacagcgcc gaggaccacc tgatcctcat cggcctcatc ttgctattcg gacttgcgct
      301 cggccgtgcg ctcggccgcc gtcggattcg cgccttgccg atccttgtgc tggcggtgct
      361 cggttccgcg gtcgccgtca cgggacggcc ggtccacgcg cacgagggcc atgatcatga
      421 cgccgcgatc tcagttcccg caggcgatat cgcgcggcgc ttgccggacg gccgggtatt
      481 cgtcccgaag ccgacgcagc gcatcctgga cgtccgcact gtggttgcca agaccgaaac
      541 ggtacctaag gcggttgtcc ttgtgggccg aattatcgcc gacccgaacc gcagcggcct
      601 ggtccagagc atcaacggcg gccgcgtgat tgcgccggag caaggccttc cgcggctcgg
      661 ccagaccatt gccaaaggag atgtcctggc ctcggttgaa cctccgatgg gcatggcaga
      721 tcggacgacg atttccgaac gcatgggcga actggagcag atgatcgccg tcgcggaagc
      781 caagctcaag cgcttgcgcc ccatggccga acggcaggtc atgccgcagt ccctggtcat
      841 cgagacagaa gcagaactgg ccggacttca ccggcgacgc gaggtggtcc gcgagactcg
      901 gatcgcgccg gagatattgc gcgcccccat cgatggcgtg gtcgcgacgg cgcgcgtggt
      961 cgccggccag gtggtgcagg cgcaggatgt gttgtttcaa atcgtcgatc cgaattcgat
     1021 ttgggtttaa gcctacgact acggtgacaa tgatcctgcg gcgctcaagc atgcgacggc
     1081 ggtcggtccg ggcaatgttg cgatgaagct cggcttccag ggatggagcc gaaccctgca
     1141 acagcaggcg acggtgttgc agttcgccat tgccgcccca cccccctccg cccgcgtggg
     1201 ccaacccgtc acggtcacgg ctcagcgcgg cgaaaccgcg aacggcatcg ttgtcgaccg
     1261 cgatgcagtc gtgcgcggag gcaatggaga gaccattgtc tggcgccatg tggagccaga
     1321 ggtcttcgag ccgcgcccca ttcgcaccga gcctttcgac gccatgcgcg tgctcattgt
     1381 ggccggagtc gccgagggcg agcgcatcgt cgttcgcggc gccgggctga tcaaccaaat
     1441 tcgctaggag gccgcgatgt tcaacgttct cgtctcggcg agcctgcgcc atcgcgtttt
     1501 cgttctggcc gccgcattca tcctggtggt ctacggctcg ctcatcctgc cgcgcattcc
     1561 catcgatgtc tttccggacc tcaaccggcc gatcgtcacc ctgatcacgg aggcagaggg
     1621 gctcgctccg caggaggtcg agcaactcgt cacctacctg atcgaaagca tcatgaacgg
     1681 catgcccggc gtaacgcgtg tgcgttcggt atcgggcatc ggtctgtcga ttgtctacgt
     1741 cgagttcgac tggggcaccg acatctttcg caatcgccaa ctcgtctccg agcgccttgc
     1801 tctggtgcgg gaccagcttc cccgcgggac gacgccgcag atgggaccca tcacctcgat
     1861 catgggcgaa atcatgctga ttgcggtcac cagcgcgacg gcatcgccca tggagttgcg
     1921 ggagatcgca gacttcgtga tgcgccctca gctcctcacc attccgggtg tagcccaggt
     1981 gatcccgatc ggcggcgagg tgcggcagta ccgtgtcgtg cccaacccgg cactgatgcg
     2041 cggtcttgag gtgacgtatg accagatcga aagcactgtc acgcgattcg gaaccaacac
     2101 cgccggcggc ttcatcgacc agcagggccg cgaatatctc attcgcaata tcggcctgac
     2161 ccggcgcctc gaagatttgc gcgacaccgc ggtcgcctat cgtgacgggc agccggtgtt
     2221 gctgcgccaa gtcgcaacgg tcgaattcgc tgcccgcgtc aagcgtggcg atgccgggta
     2281 tcgagggaca cccgccgtca tcctctccgt ccagaaacag cccggtgccg ataccgtaac
     2341 actcacgaac cagatcgagg ctgcgcttca aagcattcag aagacccttc cggccggaat
     2401 ctcagcgacc aacgttcagt tccgccaggc aaccttcatc gaggcctcca tcggcaacct
     2461 gaagacggcg ctggtggaag ccgccgtcgt ggtggcgctg gtgctcatcg tgttcttgat
     2521 gaacgtgcgg gcaaccctca tctcgcttac tgcgattccg ctctcgatcc tcgtctccct
     2581 catcgtgttt cacatcttcg gattgacaat aaacacgatg acgttgggcg gcctcgcgat
     2641 tgcgattggc gaactcgtcg acgatgcggt ggtcgacgtc gagaacattc ttcggcgcct
     2701 gagcgaaaac cgcacgcagc ccaatcgacg gcctcctctg gaagtgatcg cgcgcgccag
     2761 tcaggaagtg cggtcaggca ttctctatgc gacggtgatc atcgtccttg tgttcctgcc
     2821 cttgtttgcc atgtccgggc ttgaaggtcg gctcttcacg cctctggggg ttgcctacgt
     2881 cgcgtcgatc ttgggcagcc tgctggtgtc gataaccctg acaccggtgc tgtcgtacta
     2941 tctgtttgcc aggaatccgc gccgggagca tgacggtttt ctgcttcggc acctcaagcg
     3001 cgccaacacg gcgctactga catgggccct gcgcgagcgc gctctggttt ttgcgtcggt
     3061 tgccatcgcc gtcgttgcgg ccaccggtgc tgcggtcctg ctgcctcgca ccttcctgcc
     3121 gtcgttcgcc gagggcacgc ttgatgtcag cttggcctac aatccgggga tctcgctgcg
     3181 ggagtccagc cgcctcgggt tgatcgccga gcgtctcctg atgggcattc cggaggtcgc
     3241 ctcggtgggt cgccgcaccg gccgcgccga actcgacgag catgccgagg gcgtgcattt
     3301 cagtgagatc gatgttgatc tcaagccgtc ttcccgcctg cgtgaggatg tcctggccga
     3361 tattcgctcg cgccttgcga tcctgccggc gtccgtcagc gtcggccaac cgatcgcgca
     3421 ccggatggat cacatgctgt ccggcatccg tgccgagatt gccgtgaaga tctacggcga
     3481 tgatctcgac accctgcgca gtgttgccga gacgctgcgg gaccgcctgg tgccggttgc
     3541 aggccttgcc gacctccagg tggagaagca gaaccggatt ccgcagcttc gcgtcgaggc
     3601 cgaccatgag cgggcgcgat tgtacggcgt ctcgccggcc gtgctgaccc gcgcgcttga
     3661 aggactgtcc aacggccgca ccgtgtccca ggtcgtaacc gaaggtaacc gccggttcga
     3721 cgtcgtcatc cggctgtccg acgtggaccg ttcgacgacg gggcttggcg atctcctggt
     3781 cgaaactccc tccggacacg tgccgttgcg cctcgttgcg cgaatcgacg agaccgacgg
     3841 tcccaatcag atccttcgcg agaacggtca acggcgcatt gccgtgtatg ccaacactga
     3901 tggcgtgcag gatcgggccc agatcgttgc cgacatcagg aatgtgcttg gcgccacggc
     3961 atggccgcag ggatatcgcg tgacgctcga gggcacctac caggcttacg aagacgccgc
     4021 gctccgcatt gccgttctct cgatcgcatc cctggtgctg atcttcctgg tcttgcagaa
     4081 ccgataccgg tcttcaatgc tcgcgctgat catcatggct aacgttccgc tggcgttgat
     4141 cggcagcgtc gcggcactct ggattgccgg tctgcccctt tcgatcgcca gcatcatggg
     4201 gttcgttacc ctcgccggca tcagcacccg caacggcatc ctgaagatca gccgctacat
     4261 caatctcgcg cttcatgaag gggcgaggtt cgggccggac ctcgtcatgc gcggcagcat
     4321 tgagcggctg gcgccagtct tgctgaccgc cttgtcggcg gggcttgcac tcacgccgct
     4381 tcttcgcggc gccggcgaac cggggcgaga gattctccat cccgtggccg tgaccatttt
     4441 cggcggtctg ctcacctcca cactgctgga cgcgatcctg accccggcct tgtttctcat
     4501 gtttggccga aagcctatcg aaaggctttc ggccgcacgt ccggacgcgc tgacgccggc
     4561 tgaaatctac tgattggcaa ccagaggaaa aacctcatgc tcaagagtat atccgctgct
     4621 ttgctttcca ccctgatcgc atcaggcgcc atggctcaga gcccacagaa aggcgtgaac
     4681 ggcggcgacg tcgtcgtcat ggaaggacat ccgatcgaat tcgtcagcaa gggccaggag
     4741 attgtgttct acatcctgga agacgatggc aagagtccga ccccaacgaa aggttttgaa
     4801 ggccgcgctg tgattcagga cggcggcaag acctttgcgg tgaatctttc ccctgcagag
     4861 ccaaacgctt tcatcgcgca gcttccgatg cccctcggct cgaaggcccg cgtggtgttc
     4921 tcggcgaagg tggcggggca caaccttcaa gcacgtttca caacaaacta gggggcgcaa
     4981 ctgtgaattc tcgggcaata aaccttgttt cggcggtcgt gatcgcgaca acgcggcacc
     5041 ttgttccgct tgcattggta ttagtggcaa cacctgcatt tgcgcattct gagaatggtg
     5101 tcgctatcga tttctggggc ggcttcaccc acccaatctt cggccccgac catgtcatcg
     5161 cgatggtcgc ggtaggcttg tggggtgctt ttctgggcgc tccggccatc tggctgcttc
     5221 ccgtcgtgtt tccgctggta atggcggtcg gaggcgccat cggcgtggct ggggtgccgc
     5281 tgcccggcgt ggagaccggt atcgcaatct cggcaatcgc gctgggcggg atggtggcgc
     5341 ttgccgcaag gccgccgctg tggatcgcag cggtgttggt cggcgccttc gcgatctttc
     5401 acggccatgc gcatggcgct gagctgccta ttggggcgga cgccgtcgcc ttttcgatgg
     5461 gcttcgtcat cgcgaccggc atgctgcacc ttgccggtat cgcgttcggc ggtctttccc
     5521 attggcccgc cggcaggatc gcggtgcgcg cagtgggcgg cgtcatttgc ctgctcggct
     5581 ttgcttacct gggtaagttc ctatgaaccg gtcgtttcct gtcgctatcc ttgtctgcct
     5641 gatcgtatcg acgacaccgg cgctggccca ttcgcccatc atgggcatcg gcggtgtgtt
     5701 cggcggcgtc attcacgccc tgctgatacc ggaacatggg ctcggcctgc tggcgctcgg
     5761 tcttgtcctt ggtcggcaac aacaagcggc ccgccgcgcg ggcttgttga ttttcgccgc
     5821 cggtttgatc tgcggtctga tcggcgcggc actgacgggc gaggagatgc tcgcggccga
     5881 tattctcctg gtcgcaaccg gcatccttgg cctgttcgtt gccgcactat ggatgccgcc
     5941 gttcctcgca ttgcctcttg cggccgtcgc ggggataaca tttggcctgg attcaaagcc
     6001 ggatggaatc tcggtcgacg agggcattcg catgctggta ggaagtggtc ttggcgccgt
     6061 gcttgcgctt gcgattgccg ctgagggttc ggtttatttg cggggaaatg ccccgcttat
     6121 cgcagcccgt gtagcgggat cctggatcgc tgcgattggc atcatggtgc tctcgcttcg
     6181 gatcgtcacg cgaataaccg tcggatagca ggtaacctac gccacgcatg gaggagatcc
     6241 cacagactcg aaaaagcccg caatcacaaa cgtgctaccg gcgccgaggc ggtcttgctt
     6301 aaacgcgtta cgtgtggcat caaacgccct acggggctat ccgcgattgc cccgcgaggc
     6361 tgcggctgaa agatcgcgtc ccaagtcaac aggggacgcc atgcagtcga tcggctcatc
     6421 cgttctgcaa catactggat atgtagccct gccggagcac cgcgcatccg gaggattcga
     6481 tcacgccgct gtgcacgcag cgagtggcca tgtctatgtt gctcacaccg ccaacgatgc
     6541 cgtggatgtc ttcgatccag tagcgcagat acacttgtat tcgattcccc aattgcccgg
     6601 cgtcgccggc gtcgtcgtga gcgatgaagc gcaactcatc atcagttcca accgcgccga
     6661 aaacacaatt ggcatctttc ctcccggccc agatccgcag gtgtcaaaga tagctgtcgg
     6721 tgtccgcccc aatggcctcg cctacgatcc cgtccacaga caaatcctcg ttgccaacgt
     6781 cggggatccg gccgtgccgg gctcacatac gctcaccatc gtcgcaatcg atgaggcagc
     6841 ggcgcgggca gagatcgcgg tggccggccg gactcggtgg gcaatcttcg atcccgaggc
     6901 acaggttttt tatgtgaaca ttgctgatcc cgccgaaatc gtcgtggtcg acgcacgacg
     6961 gccccggaac atcgcgagca cattcgcgat cccctcggtt ggccctcacg ggctcgatct
     7021 cgatcctgag tcgcgtcgcc tgttctgcgc ctgcgattcg ggagagttaa tcacgctcga
     7081 tgcgcgttcc gggaaggtcc taggacagaa cccactgagc ggctccccag acgtcgtgtt
     7141 tttcgatcgc gtgcacgaac gcctctatgt cgccgcaggc gaaccgggaa caatcgacgt
     7201 cttcgacacg aaaacgatgg gaaagcttgg aactgttgcg accgaactgg gcgcgcacac
     7261 cttcgcgctt gcccctaccg gtgggcaaat ctacgtgttt ctaccccgca gccaccgtgc
     7321 tgcaatctat caagctgctc acacgtgaag gtgatctgga gcaggtggcg ggtgccactt
     7381 cgagagaaat tgagggcaag ccagaaaaac aatgctttgg cggctgagga cgaatcgatg
     7441 gatggcggac gggcatgcga atttgcaacg gctgcacgcg gtgcccggtg gtcgaaatga
     7501 cagccagcaa atagtgcaga aggaggttga gcatgaaatg ggtgacacgt gagcacgtga
     7561 aggtggatcg ggtcgcttgc ccctggctga tccgcaaatt catcgaccag caggcggagt
     7621 tcttgttcgt gccagccgag caggtcatgg acgtggccaa acgcgaggga gcgacgccat
     7681 atgacgtcaa gggcgtcgag ttcggacacc acggcaagga atgctcgttc gacgcattgg
     7741 tgaaaaagca cgggctcaca cgtgatccgg ccgtcgttct tctggcaaag atcgtaaacg
     7801 gtgccgacac ggacaactcg ctctggcatc agccggaggc cgcggggctg aacgcgatcg
     7861 ccgaaggctt tcggcacctt gggttcaagg atgatcacga aataatcgca gccgagtcca
     7921 tcgtctatga tgcgctctac cgatactgtc aggagatggt gcgacggggc aagcctgacg
     7981 gacagtatcg ctgaccgaca ccgaagcgcg caaggagtgg tccattgcgg acgcacaaaa
     8041 ggcccattct accccccggc catttgcgtc ggccgcaagc gtgatggttc agccgctcat
     8101 gctcaagcca gcggatgaac ggactttctg agcggctacg cgtcagccgt tacgaacaca
     8161 actatggtgg cgcgcttccg gcgactgaac gccatcaaag cgcgtcttgc ggcactcgac
     8221 tgggcgcaca ccccggggtt cgagatcaat ggcctcaagc gcgagggctt aatggctaag
     8281 agctcggtaa tactacacga gatctatttc gagtcgctcg gcggctgccg cgatagtcca
     8341 ctgaccgggc ttgtcgaacc gcccgccgga ctcgtccagg cgctcgagcg cgatttcggc
     8401 agcgtcacag gtgcaccgcg tttaccgcca tcgcaaaggc ggcttaggtt gggcgatcct
     8461 cgcttggtct gagcgcctgg gcc
//
LOCUS       DATILV010000870         3916 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2773206, whole genome shotgun sequence.
ACCESSION   DATILV010000870 DATILV010000000
VERSION     DATILV010000870.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3916)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3916)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3916
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2773206"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(93..1034)
                     /locus_tag="VLJ17_21105"
     CDS             complement(93..1034)
                     /locus_tag="VLJ17_21105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HSV25512.1"
                     /translation="MTEIDPAQSHSGSRTAATARRARLIGIALMCGAVGLFAFLDTTA
                     KYLGRQIDVLQVVWARYTFAFLLTLIVSNPLSRPGLLRTGRPVFQVGRATLLLGSTML
                     NFFALKYLRLDQVLAIIFSTPFFVAALSGPALGEWVGVRRWAAIGVGFIGILVVTRPG
                     FGLVHAAAILAVMAALSYAAYALSTRILARTDSNETTLFYSNFVGAAMMLPVIPFVWK
                     TPDPWQIVLMALAGALASLGHYMLIVAHRLAPASLLSPFIYSQLVWVIALGYAVFGDV
                     PDAYTLIGAAIVIASGLYVFHRERVRGPRIAKGATRE"
     gene            complement(1031..1807)
                     /locus_tag="VLJ17_21110"
     CDS             complement(1031..1807)
                     /locus_tag="VLJ17_21110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV25513.1"
                     /translation="MAWRRIVLPVATLALGILIWDLVVRIKDIPPFILPGPGLVAATL
                     LSDWALLWDSLLVTLATTFDGLALALVGGVGLAILFNQSRLIEHSLYPYAVILQVTPV
                     VAIAPLLLVYLPQQAAVLACAWIVAFFPILANTTLGLNSVDRNLVDLFEIYGASRVNV
                     LLRLKLPAALPYMLGGLKIAGGLSLIGAVVAEIAAGSAGAGSGLAYRIAESSYRLNIP
                     RMFAALILLSIAGIAIFVALSLLSYFVLRRWHESAIAIER"
     gene            complement(1863..2666)
                     /locus_tag="VLJ17_21115"
     CDS             complement(1863..2666)
                     /locus_tag="VLJ17_21115"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018181424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV25514.1"
                     /translation="MLPSNAPSGLGVPVVTLQGVAKRFPNGTLALDQFALAIQNGEFV
                     SLLGPSGCGKSTALRLIAGLGQPTRGDISWNGARRVGGRRNGPDVGFVFQEPTLMPWT
                     TVFRNVMLPLELEGVEHGVATQRVAQALERVGLTAFRDAYPRELSGGMKMRVSIARAL
                     VTDPPLLLMDEPFAALDEITRFKLNNDLLKLWQAAGHTVIFVTHSVFESVYLSNRIVV
                     MTPRPGRVFTELTVDAPYPRDESFRTSAEYARHCRIASQALSRAMEGGP"
     gene            complement(2677..3726)
                     /locus_tag="VLJ17_21120"
     CDS             complement(2677..3726)
                     /locus_tag="VLJ17_21120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV25515.1"
                     /translation="MFLKPALRRPARFLAAARFIVACAVASNILAGNAALGQTPDKVS
                     FATNWVAEAEHGGFYQALADGTYRKYGLDVTIVPGGPQVNNRILLPVGKIDFYLSANT
                     LQSFDAVEHNIPTVVIAAMFQKEPQVLIAHANRGINDLKDLKDLMLYISKEGMASYFQ
                     WLKADYGLVDAQVRPYTFNPQPFLADRNSAMQGYVTSEPYAIEKQTRVKPKVFLIADY
                     GFNSYSTLIETRRDLVERKPDLVQRFVDASIIGWYNYIYHDNAPANDLIKRQNPEMTD
                     DLLAYSVAKMKEYGIVDSGDSLELGIGAMTDPHMASFFDKMVRVGVVKANLDYRQSYT
                     LRFVNRKVGIELRRN"
BASE COUNT          885 a         1147 c         1196 g          688 t
ORIGIN      
        1 gaatctgccc atacgatctt gatgccggca ccgtacagcc cgcagcgacc gtctgtatca
       61 ggcttacccg acaccgttca acccgcaagg ggtcattctc gcgttgcacc ctttgcgatg
      121 cgcggtccgc gaaccctttc gcggtgaaag acatagagac ccgatgcgat gacgattgcg
      181 gctccgatca gcgtgtaggc atccggtacg tcgccgaata ccgcatagcc aagcgcgata
      241 acccatacca gctggctata gatgaacggc gacagcaggg atgctggcgc gagccggtgg
      301 gcaacgatca acatataatg gccgaggctg gcgagcgcac ccgccagcgc catcagaacg
      361 atctgccatg gatcaggggt tttccagaca aacggaatca ccgggagcat catcgcggcg
      421 ccgacgaagt tcgaatagaa caacgttgtt tcattggaat cggtgcgtgc caggatgcgg
      481 gtggacagtg cgtaggcggc atagctcaac gctgccatca cggccagaat ggcagccgca
      541 tggaccaaac caaatcccgg cctggtcacc accaaaatgc cgatgaagcc caccccgatc
      601 gcggcccagc ggcggacacc gacccattcg ccgagcgccg gccccgacaa ggcggcgacg
      661 aagaacgggg tcgagaatat aatagcgaga acttgatcga gccggagata tttaagggca
      721 aaaaaattga gcatcgtcga gcccaacaac agggtggcgc ggccgacctg gaatacaggc
      781 cgcccggtgc gcaaaagacc cgggcgactc aacggattgg aaacgatcag cgtaagcaga
      841 aacgcaaaag tatagcgtgc ccatacgact tgaagcacgt cgatttggcg gccgagatat
      901 tttgcggtcg tgtcgaggaa cgcaaataag ccgaccgcac cacacatcag cgcaatgccg
      961 atgaggcggg cgcggcgggc cgtggccgcg gtccgacttc cgctatgact ttgcgcggga
     1021 tcgatttccg tcaccgctcg atcgcaatcg cgctctcgtg ccagcggcgc agcacgaagt
     1081 atgacagaag cgacagggcg acaaagatcg cgattcccgc gatcgacagc aggatcagcg
     1141 ctgcaaacat acgtgggata ttgagccggt agctcgattc agcgatccga taggcgagtc
     1201 ccgatcccgc cccagccgaa ccggcggcga tttccgcaac caccgcgccg atcaacgaca
     1261 atcctccagc gatcttgagg cccccgagca tgtaaggcag cgcggccggc agcttgaggc
     1321 gcagcaacac gttgacccgc gaggcgccat agatttcgaa cagatcgaca agattgcgat
     1381 cgaccgagtt gagcccgagg gtggtgttgg cgaggatcgg aaagaacgcc acgatccagg
     1441 cgcaagccag cactgccgcc tgctgcggca gatagacgag aagcagcggc gcaatcgcaa
     1501 ccaccggagt gacttgtagg ataacggcgt aagggtaaag agaatgctca atgagccgcg
     1561 attgattgaa caggatcgca agcccgacgc cgcccacaag cgccaaggca agcccgtcga
     1621 acgtcgtcgc gagcgtgaca aggagcgagt cccacagcaa agcccagtcc gatagcagcg
     1681 tcgccgccac caggccgggc cccggtagaa tgaagggcgg gatatccttg atgcgcacaa
     1741 ccaggtccca gatcaggatg cctagcgcga gcgttgcaac cggcagcacg atccgccgcc
     1801 atgccatcgc aatgccgccg gccgtgattg gcggcggatc gggactgctc atcggttccc
     1861 tctcacggac cgccttccat ggcgcgcgac aaggcctgtg aagcgatccg gcagtggcgc
     1921 gcatactcgg ccgaggtgcg aaagctctcg tcgcgcggat agggcgcatc gacggttagc
     1981 tcggtgaaaa cgcggccagg ccgcggcgtc attaccacga ttcgatttga cagatagacc
     2041 gattcgaaca ccgagtgggt cacgaagatc accgtatgtc cagccgcctg ccacagcttt
     2101 aaaagatcgt tgttgagttt gaagcgggtg atctcgtcaa gggcggcgaa cggctcgtcc
     2161 atcaatagga gtggcgggtc agtgacgaga gcgcgcgcga tcgacacccg catcttcatg
     2221 ccgccggaca gttcgcgcgg ataagcatcg cgaaaggccg tcaatccgac ccgctccagc
     2281 gcctgggcga cgcgctgcgt tgccacacca tgttcgacac cttcgagctc gagtggcagc
     2341 atgacgttgc ggaacaccgt ggtccacggc atcagggtcg gctcctgaaa tacgaagccg
     2401 acatctggcc cgttgcggcg gcctccaacg cgtcgggcgc cgttccaaga aatgtcgccg
     2461 cgggtaggct gaccaagtcc agcaatcagc cgtagcgcgg tggatttgcc gcagccggag
     2521 ggccccagca gggatacgaa ttcaccgttt tggatggcga gcgcaaactg gtcaagcgct
     2581 aacgtgccgt tcgggaaccg cttggcgacg ccttggagcg tgacgaccgg cacccccagg
     2641 ccggacggtg cattggacgg aagcatcgag atgttgctaa ttgcgccgca gctctatccc
     2701 gaccttccga ttcacgaagc gcaacgtata cgattggcga tagtcgaggt tggctttgac
     2761 aactccgact cgcaccatct tgtcgaagaa gctcgccatg tggggatcag tcatcgctcc
     2821 gatgccgagc tcgagtgaat cgcctgaatc cacaatgccg tattccttca tcttggcgac
     2881 cgaataggcc agaagatcat cggtcatttc gggattctgg cgcttgatca agtcgttggc
     2941 gggcgcattg tcgtggtaaa tataattgta ccagccgatg atcgaagcat cgacgaaacg
     3001 ttgcaccaga tcgggcttgc gctcgacgag gtcacgccgc gtttcgatca acgttgaata
     3061 gctgttgaag ccgtaatccg cgatcagaaa aaccttaggt ttcactctgg tctgcttttc
     3121 gatcgcgtat ggctcggacg tcacataacc ctgcatggcg ctgttgcgat cggccagaaa
     3181 gggctgcgga ttgaatgtat agggccggac ctgggcgtcg accaagccat aatccgcttt
     3241 gagccattga aaatagctgg ccatgccctc cttggatata tacagcatca agtctttcag
     3301 atccttgagg tcgttgatac ctcgattggc gtgtgcaatc aggacctgtg gctccttttg
     3361 gaacattgcc gcgatcacga cggtcgggat gttgtgctcc acagcgtcga aggactgcag
     3421 cgtgttcgcg ctaaggtaaa agtcgatctt tcccaccggc agcaaaatgc ggttattcac
     3481 ctggggaccg ccagggacga tggtgacgtc gagcccgtac ttgcggtaag tgccgtcggc
     3541 gagcgcctgg tagaatccgc catgttcggc ttccgcgacc cagttggtgg caaatgaaac
     3601 cttgtcgggc gtctgcccca aggcagcatt gccggccaat atgttgctcg ccaccgcaca
     3661 ggcgactatg aaacgcgcag ccgcgagaaa tcgcgcgggt ctgcgcaagg cgggtttcag
     3721 gaacatggtt gttggaaatc caggggtctg catagcctac ggtctccaca tgtgcatgag
     3781 attacgccag cgcaaccgga aatgcgagtg accatgacat gatgccgaag cgcgactgga
     3841 ccgaaatgac gtggaccgac gtggcggccg gtgacacgcg gcgttggatc gcggtgcttc
     3901 cggtggcggc cgtcga
//
LOCUS       DATILV010000871         1564 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1237626, whole genome shotgun sequence.
ACCESSION   DATILV010000871 DATILV010000000
VERSION     DATILV010000871.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1564
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1237626"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            77..1141
                     /locus_tag="VLJ17_21125"
     CDS             77..1141
                     /locus_tag="VLJ17_21125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HSV25516.1"
                     /translation="MIAKATRVRLSRGTRSELEGLLRASTTEQRMAQRARIILLAAKG
                     GSSRAIAREVGMQPRIVSKWRMRFAADGIDALKDKARPGAKPVYSEATGKRILSILDR
                     PVPAGRARWTGDLVAKALGDVDVNYVRRFLRKQKIDLAGRKSWCESNDPDFAAKAADI
                     VGLYLAPPENAIVICVDEKPSIQALERAQGYLKLPNGRCLTGHSHDYKRHGTTTLFAA
                     FEVATGKVRVAHKKRRRRKEFLAFMDQVVAAWPKRQLKVILDNLNTHRRNERWLARHP
                     RVKFHFTPTRASWLSQVECWFSNLQANSLQGTSFTSVEQLTKHIDAFIESYNSTAEPF
                     VWTKSKVYQRRVKGRRISEL"
     gene            1264..>1564
                     /locus_tag="VLJ17_21130"
     CDS             1264..>1564
                     /locus_tag="VLJ17_21130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25517.1"
                     /translation="MNGAQKGTRAILESRAALISPARFLTGYLGMSDIPQNSKVSRRL
                     AAILAANIAENSVRISADEGATVRDLKPHQADILPMVRDHGGRVIHAAGDGILAEF"
BASE COUNT          353 a          448 c          461 g          302 t
ORIGIN      
        1 gtcataacgg caacgtatgt tgatcatttg gacatagggt ctgttctgtc tggtggtggc
       61 gtgattcaac attgggatga ttgcgaaagc cacacgggtc cggctcagcc gggggacgcg
      121 cagcgagctt gaaggtttgc tgcgcgcatc gacaaccgag cagcgaatgg cacagcgcgc
      181 ccgcatcatt ctgctggcgg caaagggtgg atcttcgcgg gcgatcgcgc gggaagtggg
      241 gatgcagcca cgcatcgtta gcaagtggcg gatgcgcttt gctgccgatg ggatcgacgc
      301 cttgaaggac aaagcgcggc cgggggccaa gccggtttac agtgaggcaa cgggtaaacg
      361 catcttgtcc atactcgatc ggccagtacc ggcggggcgt gcccgctgga caggcgatct
      421 ggtcgccaag gctctgggcg acgtcgacgt aaactatgtg cgacgcttct tgcgtaagca
      481 gaagatcgat ttggctgggc gcaagagctg gtgcgagagt aatgatcccg attttgccgc
      541 caaagccgcg gatatcgtcg gtctctacct tgcgccccct gagaacgcca ttgtgatctg
      601 cgtggatgag aaaccgtcga tccaggcgct cgagcgcgct caaggatatc tgaaactgcc
      661 caacggtcgt tgcctgacag ggcatagtca cgactacaag cggcacggca caactacact
      721 gtttgcagct ttcgaagttg caaccggcaa agtaagagtt gctcacaaga agcgccgacg
      781 ccgcaaggag tttctcgcct tcatggatca agtcgtggca gcttggccaa agcggcaact
      841 caaggtcatc ctcgacaatc tcaacacaca ccgcagaaac gagaggtggc tggcacggca
      901 tcctcgagtg aaattccact ttacgccgac acgggcctcg tggctcagcc aggtcgaatg
      961 ctggttctcc aatttgcagg ccaactcgtt gcaggggacc tccttcacct ccgtcgagca
     1021 gctcacgaag cacatcgacg ccttcattga gagctacaac agcactgccg agccattcgt
     1081 gtggacgaag tccaaagtct atcagcggcg cgtcaaagga cgccgtatca gcgaattgtg
     1141 actcgaggta ctaggcaagc gtagcatacg cgtggactga agaatccggc tcaagccctt
     1201 cgtcgtcgat tattagcagc atgctcgata cgaccttgca tccagaaaac cctggccccg
     1261 ggaatgaacg gcgcgcaaaa aggcacacgc gcaatcctcg agagccgagc cgcgctaatc
     1321 tcacccgcac gttttttaac cggttatctg gggatgtccg atattcctca aaattcaaag
     1381 gtatcccgca ggctggcagc catccttgct gccaatatcg ccgagaacag cgtgcgcata
     1441 agcgctgacg aaggagccac cgttcgtgat ctcaaaccgc atcaggcaga catcctcccg
     1501 atggtccggg atcacggcgg ccgggtcatc catgccgccg gtgacggtat cctcgccgag
     1561 ttcg
//
LOCUS       DATILV010000872         4120 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_468058, whole genome shotgun sequence.
ACCESSION   DATILV010000872 DATILV010000000
VERSION     DATILV010000872.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4120
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_468058"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..236
                     /locus_tag="VLJ17_21135"
     CDS             <1..236
                     /locus_tag="VLJ17_21135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25518.1"
                     /translation="SHYSIRTYFSNGNGFTTGIGIAPNMNFTTAGSVNTAGAPTPSPG
                     ATGSGSLIVMTDPSGLNLAGQEVLARLPLCEDF"
     gene            776..1702
                     /locus_tag="VLJ17_21140"
     CDS             776..1702
                     /locus_tag="VLJ17_21140"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formylglycine-generating enzyme family protein"
                     /protein_id="HSV25519.1"
                     /translation="MRYQIAFSTTWALGAVLAAALAGGVAAEPAPQGLSDQSVAGAVH
                     LAEAQLQSDPAAVAQAETPSASSAPGTTFRDCAECPEMVVVPAGKFMMGSEDGADDEK
                     PVHEVVIAKPFAVGKFEVTFDEYDACAAGGGCVNHQHPSDAGWGRGRHPVIAIPWMWV
                     SGYLDWLSQKTGKRYRLLTEAEWEYAARAGTTTKYAFGDTITHDQANFSAGTRGQGRT
                     VEVGSYPPNAWGLYDMHGNVWEWVEDCYEVDYEKAPADGSAYVYPSCPTRVARGGSWD
                     YEADDLRSSLRYAVRPYYGVDEIGFRVARSLE"
     gene            1868..2788
                     /locus_tag="VLJ17_21145"
     CDS             1868..2788
                     /locus_tag="VLJ17_21145"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formylglycine-generating enzyme family protein"
                     /protein_id="HSV25520.1"
                     /translation="MRYPTTWALAAVLAAALAGGVAAGPTVRGQPDQSGAGAIRTAEA
                     PSHSDSAAAGAAEPQAPPGAPAPGTTFRDCSDCPEMVVVPAGKFMMGWDGGDADEKPV
                     HEVVIAKPFAVGKFEVTFDEFNACLADGGCKRFKDAHIGGEKGRRPVTDITWHEARGY
                     AAWLSKKTGKPYRLLSEAEWEYAARAGATTKYAFGDTITHDQANFSFGQQGEGRTKEV
                     GSYPPNAWGLYDMHGNVWEWVEDCYYGTYEGAPADGTARVFPSCANRVLRGGSWDYEA
                     DEIRSSVRFKLSPDTWPIDEAGFRLARSLE"
     gene            complement(2968..>4120)
                     /locus_tag="VLJ17_21150"
     CDS             complement(2968..>4120)
                     /locus_tag="VLJ17_21150"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012320352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052689 - carboxylic ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="lactonase family protein"
                     /protein_id="HSV25521.1"
                     /translation="STAAMLAAALLGTQTGPATAQTPPETSALYAYVGSFTTAQRKAR
                     GDGINVYRVDPTTGDWTHVQHIGDLVNPSFLALSPDQRFLYSVHGDEDYATAFALDPA
                     TGQAKLLNRAATGGKNGVREAVDPSGKFLVVANYASGSAAVLPIAPDGSLKDQHQVVQ
                     LPGEPGPHKVEQTSSHPHDIVFDRSGRFVLVPDKGLDRVFVFRFDEATGRLAPTEQGS
                     VKTRPGAGPRHLAFHSRLPIVWVLNELDSTIATYSFDTESGALKPLQVMSTLPDDFTG
                     YSTAAEIAVSPNGHVYASNRGQDGIAWFRVFPQGTLKIFGWQSTLGKTPRFIGIDPAG
                     SNLYAANEQSDTVVALRLDEYTGKPTPSGKVIQNTSPVTIVFTREATTK"
BASE COUNT          752 a         1245 c         1334 g          789 t
ORIGIN      
        1 cgagccacta cagtatccgg acctatttct cgaatggcaa tgggttcacc accggcatcg
       61 gcattgcgcc caacatgaac ttcaccaccg ccggctccgt caacaccgcg ggggcgccga
      121 cgccatcccc gggagccacc ggcagcggat cgctgattgt catgacggat ccgtcgggcc
      181 tcaacctcgc cggccaagaa gtcttggcca ggcttccgct ctgcgaagac ttctaagcct
      241 caacgggtga gcatgaggga gcgagcgtga tcgctccctc ctaggaggcc tgcggcgtgc
      301 ggagagcttg ctctccgcgc gctgcgtttt ggggtgctag aacttccgac ctcttcctga
      361 gttgcccacc ggcggggccg gccaccgcgt acgagagtct gttctccaat tctcgacatg
      421 gggagaattt tgtttttcat ttttgtgtaa ggagcgcgcg cttgcgcgcg cgtttcgaag
      481 gatggccacg ggcgagaacg aggcaggcgg ccatccttcg agacgcgccg catagatgcg
      541 gcgctcctca ggatgagggc cgagattgtt ttgcggtagc gcgtaggatg ggttgagctc
      601 ttgcgagacc catcatgggc ctttccatgc ggctcggatc gatgggtttc gctgccgctc
      661 aacccatcct acgctctggc atttcccttc ggtgcacttt tcgaaaaatg cggatcatga
      721 tagagcgacg ccgaaattcc ttcactgtta aatccgcaca ggagctgaac tatccatgcg
      781 ttatcagatc gcgttttcga ccacatgggc gctcggcgcg gtgctcgcgg cggcgctggc
      841 cggcggcgtt gcggcggaac cggcaccgca aggcctatcg gatcagtccg ttgccggcgc
      901 ggttcacctt gccgaagccc aattgcagtc agatccggcc gccgttgccc aggccgaaac
      961 gccgtctgct tcgagcgcgc ccggcaccac ttttcgcgat tgcgccgagt gccccgagat
     1021 ggtggtggtg ccggccggaa aattcatgat gggatcggag gacggcgccg atgacgagaa
     1081 gccggttcac gaggttgtca tcgccaagcc gtttgcggtc ggcaagttcg aagtaacgtt
     1141 tgacgaatac gacgcctgcg cggcgggcgg cggttgcgtg aaccaccagc acccatccga
     1201 cgcgggctgg ggcaggggtc ggcatcccgt catcgctata ccgtggatgt gggtcagcgg
     1261 atatctggac tggctctccc agaagaccgg caaacgctat cggcttttga ccgaggccga
     1321 atgggaatat gcggcgcgcg ccggcaccac caccaaatat gcatttgggg ataccattac
     1381 ccacgatcaa gccaactttt cggccggaac gcgggggcaa ggccgcaccg tcgaagtcgg
     1441 atcgtatcca cccaatgcat ggggcctcta cgacatgcac ggcaatgttt gggagtgggt
     1501 cgaggactgc tacgaggtcg attatgaaaa agcgcccgcc gacggctctg cctacgtcta
     1561 tcccagctgc cccacccgcg ttgcgcgcgg cggttcctgg gattacgaag ctgacgacct
     1621 ccgctcgtcc cttcgctacg ccgtgaggcc ttactacggc gtcgacgaaa tcgggttccg
     1681 ggtggcgaga tcgcttgagt agatggaggg ctcggcttcg tgccgacctg taggagcgac
     1741 cgggcggcca caagggccgc ccctaccctt gtggtcgccc ttgcgagacc accatttccc
     1801 tttggtgcac tttctgaaaa atggggatcg tgatagacag ctgatccgca cgggagctaa
     1861 atcatccatg cgttatccga ctacatgggc gctcgccgcc gtgctcgcag cggcgctggc
     1921 tggcggcgtt gctgcgggac ccaccgtgcg aggtcaaccg gatcagtcgg gcgccggcgc
     1981 cattcgcact gccgaggcgc catcgcattc cgattccgcc gctgcgggag ctgccgagcc
     2041 acaagctccg cccggcgcgc ccgcgcctgg caccactttc cgcgattgct ccgattgccc
     2101 cgagatggtg gtggtgccgg caggcaaatt catgatggga tgggatggtg gcgacgcaga
     2161 cgagaagccg gtacatgagg tcgtcatcgc gaagccgttc gcggtcggca aattcgaggt
     2221 gacgtttgac gaattcaacg cctgcttggc cgacggagga tgcaagaggt tcaaagatgc
     2281 tcacatcggg ggtgaaaagg gtcggcgtcc cgtcaccgat ataacctggc acgaagcccg
     2341 gggctatgcg gcgtggctct cgaaaaagac cggcaaaccc tatcggcttt tgagcgaagc
     2401 cgagtgggaa tatgcggcgc gcgccggcgc caccaccaaa tatgccttcg gggataccat
     2461 cacccacgat caggccaact tttcattcgg acagcagggt gaaggccgga ccaaggaagt
     2521 cggctcatac ccacccaatg catggggcct ctacgacatg catggcaatg tgtgggaatg
     2581 ggtcgaggat tgctattatg gcacctacga aggggcgccg gccgacggaa cggctcgagt
     2641 ctttccgagc tgcgccaacc gcgtcctgcg cggcggttcg tgggactacg aagctgatga
     2701 aatccgctcg tcggttcgct tcaagctgtc gccagacacg tggcccatcg acgaagcggg
     2761 ctttcgcctg gcgagatcgc ttgagtagat tgtaggtcgg agtcgtgccg agacctgttg
     2821 gggcgacact tgtggtcgtc cctgacggag cgtggtcagg ccatcttaaa ccgaccattg
     2881 cgtccgccag caagaggggc gaccacaagg gtcgcccata caaacattcc atactagcga
     2941 ccataggggc ggccacaagg gccgacccta ctttgtcgtc gcttcccggg tgaacacaat
     3001 cgtaaccggg ctcgtgttct ggattacctt cccgctcggc gtcggcttgc ctgtatactc
     3061 gtcgagcctc agcgccacca cggtgtcgct ctgttcattt gccgcataga gattgctccc
     3121 ggcagggtcg atgccgatga agcgtggggt tttacccagg gtcgactgcc agccgaagat
     3181 cttcagtgtc ccctgcggaa agactctgaa ccaggcaatg ccgtcttggc cgcggttgga
     3241 ggcatagacg tggccattgg gcgataccgc gatctcggct gcggtgctgt agccggtgaa
     3301 gtcgtccggc aaggtcgaca tgacctggag tggcttgagg gcgccgctct cggtgtcgaa
     3361 gctgtaggtc gcgatcgtgc tgtcgagctc gttgagcacc catacgatcg gaagcctcga
     3421 atggaacgcg aggtggcggg ggccggcgcc cggccgcgtt ttcaccgaac cttgctcggt
     3481 cggagcgagc ctgcctgttg cctcgtcgaa gcggaagacg aagacccgat cgagcccctt
     3541 gtccggcacc agcacgaagc ggccggaacg atcgaagacg atgtcgtgcg gatgcgaact
     3601 cgtctgctcg accttatgcg ggccgggctc gcccggcagc tgcacaactt gatgctggtc
     3661 cttgagcgat ccgtccggcg caatcggcag cactgcggcg ctgccgctcg catagttggc
     3721 caccaccagg aatttacccg acgggtcgac ggcctcgcgg acgccgttct tgccgccggt
     3781 cgcggcgcga ttgaggagct tggcctggcc ggttgcggga tcgagcgcaa aagcagtcgc
     3841 gtagtcctcg tcgccgtgca ccgaatagag aaaacgctgg tcagggctca acgcaagaaa
     3901 ggacgggttg accagatcgc cgatgtgctg gacgtgagtc cagtcgccgg tggtcgggtc
     3961 gacgcgatag acattaattc cgtcgccgcg cgctttgcgc tgagcggtcg tgaacgatcc
     4021 cacataggcg tacaacgcgc tggtttccgg gggcgtttgc gccgtggctg gtccagtctg
     4081 cgtgccaagg agggccgcgg ccagcatggc agcggtggat
//
LOCUS       DATILV010000873         5227 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_468063, whole genome shotgun sequence.
ACCESSION   DATILV010000873 DATILV010000000
VERSION     DATILV010000873.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5227)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5227)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5227
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_468063"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..204
                     /locus_tag="VLJ17_21155"
     CDS             <1..204
                     /locus_tag="VLJ17_21155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25522.1"
                     /translation="QAEREQAKLVREIKACLADDWAENESRSSAGYVVLHNASRPASI
                     TVSTDQIADYDYVVRLTLFPRGN"
     gene            complement(1788..2876)
                     /locus_tag="VLJ17_21160"
     CDS             complement(1788..2876)
                     /locus_tag="VLJ17_21160"
                     /inference="COORDINATES: protein motif:HMM:NF028178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HSV25523.1"
                     /translation="MKWASLPLLALVLSLPSCDRAASQTLPAREQIRQKVNENVLFLM
                     GGQLGAPFNQLAHDISVVVEDGDNLRVLPVVGGAAIQNVKDVLFLRSIDMALTTQEAL
                     NHLQATGELGPHLEQQLTYIATLFPNPLQILARADAKSIKDLNGKKVNFNNKGSATAQ
                     FVPGVFKALGVDAQEFYMPQGDALEKLRRGEIDATVCSCPTPVPAFANIKPESGLRFV
                     TVPYAGPIQASYLPASISNEDYPALVGKEETVDTIAANTVLISFNWQKDTARYKRTEK
                     FVNAFFSKFSEFLKPPRHPLWKSVSLAATVPGWTRFPAAEEWLKNWRADQTKGLEADF
                     KQFLSEQTTKQSKDELFREFQIWINKKK"
     gene            complement(3283..3564)
                     /locus_tag="VLJ17_21165"
     CDS             complement(3283..3564)
                     /locus_tag="VLJ17_21165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003605575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSV25524.1"
                     /translation="MRVVIIVLAAAALALPAAAEEKPVDLKRAPGLDKVEANCGACHS
                     LDYIMMNSPFPGAALWDAEVTKMIKAFGAPISEADAKTIADYLKQNYGS"
     gene            complement(3577..4701)
                     /locus_tag="VLJ17_21170"
     CDS             complement(3577..4701)
                     /locus_tag="VLJ17_21170"
                     /inference="COORDINATES: protein motif:HMM:NF012401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HSV25525.1"
                     /translation="MPPALPEGTRNTATLDALAGKKPLIKLSYRPPNYETPIEYFRTA
                     ITPNDAFFVRYHLSDIPEVDATSWKVAIGGEGANGQAELTLDDLKAMPAFEVVAVNQC
                     SGNRRGLFQPHVPGVEWGYGAMGCARWKGARLKDVLDKVGLKKEAIEIVFDGADKGVV
                     DKTPDFIKSVPVWKAVEETTLIAYEMNGQPLPHFNGFPARIVIPGWTGTYWMKHVVSI
                     KAVTKPESGFWMNPAYRIPLGKFPLVARFISQETAANTPITEMVVNSLITSHADGANV
                     KAGVPVTVGGIAWDGGYGIRTVEVSTDGKTWSQAALGQDLGRFAFRTFSFNFVPKAKG
                     KQPVMSRATNAIGQSQTAELIQNPAGYHHNVMHRVTLNAA"
     gene            complement(4899..5123)
                     /locus_tag="VLJ17_21175"
     CDS             complement(4899..5123)
                     /locus_tag="VLJ17_21175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25526.1"
                     /translation="MHGRATDADANGDGVRSECCKERKPDPDIFSMDHDHRLEGIRSN
                     ASGKVLLLRPAKVLLRVLADVNSATFAGSS"
BASE COUNT         1019 a         1574 c         1521 g         1113 t
ORIGIN      
        1 caagcggaac gggagcaggc aaagctcgtt cgcgaaatca aggcatgcct cgccgacgac
       61 tgggctgaga atgaaagccg ttcttcagcg ggctatgtcg tgttgcacaa cgcaagcagg
      121 cccgcgtcca tcaccgtgag cacggaccaa atagccgatt atgattacgt cgtccgcctc
      181 accctttttc cacggggaaa ctgacacttt tcttagagct gccgacaatc caattggcgc
      241 tacacggtgc cgcgatgctg atgaccgcgg caacgacccc atcaccgcga cggcatgcgc
      301 cacgatcagc gcttgctcgt ccgctttgct gctgggactc gaatccatgc gcttggtcca
      361 ttggagcgcg tgtcggctaa gttgtatcgg aagcgcgctc tagcttcttt ggttgatcgc
      421 attttctgcg gaaaaccggt gcccacgagc cgacaacgcc aacgaacgcg ggttgacatg
      481 gcggagcact ggcgcaattc atactgtgac acacccgcag aagtcacaga ggctatgtgc
      541 gacaaggccg tccggtgttg tcagccagcg gcctctgttt acatctgtta acaatcagtc
      601 cacgcgcgat ggacgattgt cctcatttgg attccgcggt gtaattcacc ggaggcgctc
      661 atcgagcacg accggcccgg tgatggagcg gcacgccact actgaggaaa gccgccgccg
      721 gcgatcgcgc gcgttccaga tgccgaccac ctattgcggc tccccgctga cgagccgatt
      781 gcgtgcaggg cgccgctttt cgcgcgcctc gcgaacggcg gctcttctcg ttcacgcgct
      841 cggcggtttg gtcccatcgg ggatcacagc tgcgttacat tgcgtgtgcc attcacaaca
      901 aatgaactgg agtcacaggg ggaacgtggc gcgctgagcc gactgggagc gcgtttcggc
      961 taaagttgaa ttggaaacgt cccctacatt cttcagttgg tcgcattatc tgcggacaag
     1021 gtacccactc ttgcggaaaa ttctccaaac cgtcgaccct tccacaataa tgctcaagtg
     1081 gtgtgatagc gctgattggg atggctcggg taagagcatc ccactctgag ccgactccga
     1141 gccatccggc gggcggttga gcacagacgg ccgtccgcca ctgtattcag aaaaactgca
     1201 aacgccaaaa tcgcgtcgca agggcgagat gcaccgaagc aaatcgatag cgcccgctcg
     1261 ggggctcagt ctgtcctgtc ttgcctgatc atgtcgcgca ctttgcaagt tgtgctgatc
     1321 ctcgccatgc gtgcgcactc agccgcttct gtcggaagaa ggcgggtaat cttcgggcgc
     1381 ggtcatttgc gatccagagc gcgttctggc aaagttgaat cggaagcgcg ctctagcctc
     1441 tttcagttga tcggcgcccc cttttccgaa aaatgttgta gtacgtcaat tactctgggc
     1501 cacaatacat taattcggga gacgttccga gcgagttaga gcatgcatcg cgtgctcgcg
     1561 aaacaagaga gtcgcgccag cgcatgcaca ttctgagccg ctttcgcaac aatcggaatt
     1621 cgcgtacgtt gagccgcggt ggtttcagag aattatcccc ctaaacatct ccgaacgcgt
     1681 gagcagacgg tcgacgaacc gaggccgtcc gccacagcgc tggggcgtac ggctgaagcc
     1741 gccggcgcgg tcgatcaaag tcgtgctgca cagagaaacc acagacctta ttttttcttg
     1801 tttatccaaa tctggaattc acggaagagc tcatctttcg actgttttgt cgtctgctcg
     1861 ctcaggaatt gcttgaaatc cgcttccagg cctttggtct gatccgcacg ccaatttttg
     1921 agccactcct cggcggccgg aaaacgggtc catcccggaa cggttgcagc caggcttacc
     1981 gacttccaaa gtgggtgacg tggcggcttg aggaactcgc tgaacttcga gaagaatgca
     2041 ttgacgaact tttcggtccg cttgtatcgc gccgtgtctt tttgccaatt aaatgaaatc
     2101 aggacggtgt ttgcggcaat tgtatccacc gtctcttcct tcccgaccag agcgggataa
     2161 tcttcgttgc tgatcgaagc aggcagatag ctcgcctgga tcggccccgc gtagggtacg
     2221 gtgacgaacc gcaagcccga ttccggcttg atattcgcaa atgccggaac cggtgtcggg
     2281 cacgagcata cggtcgcgtc tatctcgcca cgccggagtt tctccaatgc gtctccttgc
     2341 ggcatgtaga actcctgcgc gtcgaccccc agagccttga acactccagg aacaaactgc
     2401 gccgttgcac tacccttgtt gttgaagttg acctttttcc cgttcaaatc cttgatgctt
     2461 ttcgcatccg cgcgcgccag gatctgcagc ggattgggaa agagcgttgc aatatatgtc
     2521 agctgctgct ccaggtgcgg ccccagctcg ccggtggctt gtagatggtt cagcgcctcc
     2581 tgggtggtga gcgccatgtc gatgcttcgc aagaaaagga cgtcctttac attctgtatt
     2641 gccgcaccgc caaccacagg cagcacccgc agattatctc cgtcctccac caccacggaa
     2701 atgtcgtggg caagctggtt gaagggggcg ccgagttgcc cccccatgag aaacagaacg
     2761 ttctcgttga ctttttgtct gatctgctca cgggccggca gcgtctggga tgcagcgcgg
     2821 tcacatgagg gtagggacaa tacaagagcg agtagaggca gggatgccca cttcatgacg
     2881 catctcccaa ttaccccctg aaactgacct aatgtcggaa tctccgtatc gaccgttttg
     2941 gccgatgtgc cgatgatatt accgacaaag tatgcaacac aagattgcca gcgccgccgt
     3001 catcgactgt catccacgac cggccgcagt atgtccctac cgcaaaccta aatggctgat
     3061 cggggattac gaatcggttg atacttgctc gtgatgagcg tgtcggcgga aatgtcgtcg
     3121 ggatgtttcc gtaacgcgcc ggtaatcggc gtcagcgagt tgacatagcg agcaccgacg
     3181 cagttcacac ttcgacacac aacaacagag tttatgtatg taaaagggcc gtccggttgt
     3241 cagccgagca gcccgccgtt cctataacgg gcggcgacga catcagcttc cgtaattctg
     3301 cttcagatag tcggcgatgg tcttcgcgtc ggcctcgctg atcggagcgc cgaatgcctt
     3361 gatcatcttg gtcacctcgg cgtcccacag ggcggcgccg ggaaagggcg aattcatcat
     3421 gatgtagtcg aggctgtggc aggcgccgca attggcctcg accttgtcga ggcccggcgc
     3481 tcttttcaga tcgaccggtt tctcctcggc cgccgccggc agcgcgagcg ccgcggccgc
     3541 gaggacgatg ataacgacgc gcatttgttg cctccctcaa gccgcgttca gcgttacgcg
     3601 gtgcatgaca ttatgatgat agccggccgg gttctggatc agctcggcgg tctggctttg
     3661 gccaatggcg ttggtcgcgc gcgacatcac tggctgcttg ccctttgcct tcggcacgaa
     3721 gttgaagctg aaggtgcgga aggcaaagcg gccgagatcc tgaccgaggg ccgcctggct
     3781 ccaggttttg ccgtcggtcg acacctcgac ggtgcggatg ccgtagcccc cgtcccaggc
     3841 aatgccgccg accgtgacag gcacgcccgc cttcacgttc gccccgtcgg catggctggt
     3901 gatcagcgag ttgaccacca tttcggtgat cggcgtattg gccgccgtct cctgcgagat
     3961 gaaccgcgcc accagcggga acttgcctag cgggatgcga taggccgggt tcatccagaa
     4021 gccggattcc ggtttggtca ccgctttgat cgacacgacg tgcttcatcc agtaggtgcc
     4081 ggtccagccc ggtatgacga tccgggcagg gaagccattg aaatgcggca gcggctgccc
     4141 gttcatctcg taggcgatga gcgtcgtctc ctcgactgcc ttccacaccg gaacgctctt
     4201 gatgaagtcg ggagttttgt cgaccacgcc cttgtcggcg ccgtcgaaca cgatctcgat
     4261 cgcctccttc ttgaggccga ccttgtcgag cacgtccttg agccgagcac ccttccagcg
     4321 cgcgcaaccc atggcgccgt agccccactc cacgcccgga acatgcggct ggaacaggcc
     4381 gcgccggttg ccggagcact ggttcacggc gacgacctcg aacgccggca tggctttgag
     4441 atcatccagc gtcagctcgg cctggccatt ggcgccctcg ccgccgatcg caaccttcca
     4501 gctcgtggca tccacttccg gaatatcgga caggtgatag cgcacgaaga aggcatcgtt
     4561 cggcgtgatc gccgtgcgga agtattcgat cggggtttcg tagttgggcg gccgatagct
     4621 caacttgatg agcggtttct tgcctgccag cgcatcaagc gtggcggtgt tgcgcgtgcc
     4681 ctccggcagc gccggcggca aaaggagacc ggccgcctgg actgccgttg atgtctgcgg
     4741 ggtcagcccg gaaccgacaa ttgcggcccc ggcacccgcg ccttcgagca ggcgacggcg
     4801 tgttatcatc acgtccctcc catcatgtgg cttgtctcgc gtcggtcttt cttttgccgc
     4861 tggctaactg agtgaagtgt gccgacgagc ccctgcaatc atgacgagcc ggcaaatgtg
     4921 gcggaattaa cgtctgccaa gacgcgcagc agaacttttg ccggacgcag cagcagaact
     4981 ttgccggatg catttgatcg gatgccctcc agacggtgat catgatccat cgagaagata
     5041 tcgggatcag gcttgcgctc tttgcagcac tcggacctta ctccatcacc gttcgcatcg
     5101 gcatcggtcg cgcggccgtg cattcgcgcg aaccgcgcgg cgtccttgcc gcgagagccc
     5161 taaggcgagg tcgaccatgg ctggttgccg gcccgcaaga tcgtcgcatg gatcgctatc
     5221 gctgata
//
LOCUS       DATILV010000874         3714 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2773739, whole genome shotgun sequence.
ACCESSION   DATILV010000874 DATILV010000000
VERSION     DATILV010000874.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3714
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2773739"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..396)
                     /locus_tag="VLJ17_21180"
     CDS             complement(<1..396)
                     /locus_tag="VLJ17_21180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004435423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HSV25527.1"
                     /translation="MAHLTLVSHDLCPYVQRAAIALAEKGVDFRRVDIDLANKPEWFR
                     AISPLGKVPLLRVGDVTLFESGVMVEYLEETTPHPLHPCDPLERAKHRAWMEFGSSIL
                     ADIWVLETTPDRAAFVAKRDVVADKFKAIE"
     gene            495..929
                     /locus_tag="VLJ17_21185"
     CDS             495..929
                     /locus_tag="VLJ17_21185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018244401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HSV25528.1"
                     /translation="MAKPSKSVVDAWIALNRAQRYVFEAIESELKSSGLPPLAWYDVL
                     LELWREPGGRLRQSDLEYKMLFPQYGISRLVDRLEREKLVRRERCTDDARAYWVAISD
                     KGLALRQRMWPHYAAAIQRHLGEKLSDQEACGIAEGLRKLVP"
     gene            1164..>3714
                     /locus_tag="VLJ17_21190"
     CDS             1164..>3714
                     /locus_tag="VLJ17_21190"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HSV25529.1"
                     /translation="MSVSTAKFSIILWGFAQLMKQQARRHEKFRNRLRERDLVAQLKA
                     RDEQVGRWFGVRDGKVTSSAGFHEAPDITLAFKNAALGASLLTPPINWLDQINAQKDF
                     KLTVEGPEDLTNWWAQTMMATLTAGWRFGTQLVDGTMRYCNMTNGGPVFVHVKDGKIV
                     RMTPIDFDETDPQPWTIEARGIKLTPPRKTTLAPHGQNAKSIVYSPDRLLHPMKRVDF
                     GANGERNPQNRGKSGYVRISWDEALDLVASEIKRLKSTYGPGVMAVSHGSHHTWGNIG
                     YYLSALHRFRNAVGYTQVHHNPDSWEGWYWGAVHHWGHTLRVGQSETYGTVEDCLQNC
                     DMIVFWAADPETTSGSYGAQEGTIRRQWLKNPKLGIKVVHVDPYFNASAQFLPGKWLA
                     PRPTTSVAMAMAIAYVWIKEGLYDEDYVRTHTVGFDTWRDYLLGIESGVPKTPEWQER
                     ETGVPAKDVRALAREWGKKRVYLAPGGWGNGHGGACRNQTGIQWARVMVCLTAMQGLG
                     KPGVNMGNLQWGCPLDFNFYFPGYADGGMSGDLENTSMPIELYQRMPQLPTISSTFQR
                     IPRIWMPEAIADGKAEGYAWVGKSIEHQFAKFAYPAPGHAPVRMLYKYGGSMLSTMNN
                     TNRHVRMYQSENLEFVVNQSIWFEGEAKFADVILPACTNFERVDISEWAGLGGYGHHG
                     QQQLNHRVIIFQAPAIAPLGESKSDYWIFTEICKRLGLANYFNEGMNEIDWVKRLFDA
                     SDLPKHISWKEFIRRGYYVVPAEKEKLRAPVSFRWFWENRKKDVPEHQPLPSDYTGEF
                     LRGLQTQSGKLEFECNSLKRFNDPERPPIVKHEPSWEGPHSGEMFARYPLQM"
BASE COUNT          767 a         1119 c         1145 g          683 t
ORIGIN      
        1 ctcgatcgct ttgaacttgt cagccacaac atcgcgcttg gcgacgaaag cggcccgatc
       61 cggcgtggtc tccagcaccc agatgtcggc aaggatggag gaaccaaact ccatccaagc
      121 ccggtgtttg gcgcgctcca gtggatcgca cggatgcagg ggatgcgggg tggtctcctc
      181 gagatattcc accatgacgc cagattcgaa cagcgtaacg tcgccgaccc gcaggagcgg
      241 caccttgccg agcggcgata ttgcccggaa ccattccggc ttgttggcaa gatcgatgtc
      301 gacgcgacgg aaatcgacgc ccttctcggc gagcgcgatt gcggcgcgct gaacataggg
      361 acagagatcg tgactgacga gcgtaagatg ggccatgaca agcgctccga aatctgagat
      421 acatgcaagt gcatagatat gccaattgca tgcatttgca agtaactcgt tcgtgaactc
      481 cggaattcac cgcaatggca aagccctcca aatccgtcgt cgacgcctgg atcgcgctca
      541 accgcgcgca gcgctatgtg ttcgaagcca tcgagtccga attgaaatcc tccgggctgc
      601 cgccgctcgc ctggtacgat gtgttgcttg agttatggcg ggagcccggc ggtcgccttc
      661 gtcagagcga tcttgagtac aaaatgttgt ttccccaata cggtatttcg cggctggtcg
      721 atcggctgga acgcgagaag ctggttcgcc gcgagcgctg caccgatgac gcgcgtgcct
      781 attgggtagc aatcagcgac aagggcctcg cgctacgcca gcgcatgtgg ccgcattatg
      841 cggcggcgat ccaacgccac ctgggagaaa agctgtcgga tcaggaggct tgcggaattg
      901 ccgaagggct gcggaaattg gttccgtgat caattattta tgatctaatt ggtgctagag
      961 cggattgtgg tgatctcgag ccatttcttc gcagtcatgg cccgagcttg agcggcgatt
     1021 cacgccttgc ttgctgataa gcgcaagaaa gacgtggacg ccccgcgcag gcttgtgcgg
     1081 cctgcgtagg tttggctgcg agcgcgagca tgacgatggc ggggagttcg atcacatcac
     1141 aaatgcgctc ccggaggaac ccgatgagcg tctcaacggc aaaattttcc atcatcctgt
     1201 ggggctttgc gcagctgatg aaacagcagg cgcgccggca tgagaaattc cgcaatcgcc
     1261 tgcgcgaacg cgatctggtg gcgcaactca aggcgcgcga tgagcaggtg ggacgctggt
     1321 ttggggtgcg cgacggcaag gtgacgtcca gcgcaggatt tcacgaggca cccgacatca
     1381 cgctcgcatt caagaatgcg gccctcggcg cgtcgctcct tacgccacca atcaattggc
     1441 tcgaccagat caacgcccag aaggatttca agcttacggt cgagggtcct gaggacctca
     1501 ctaactggtg ggcccagacc atgatggcga cgctgacggc cggctggcgc tttggcacgc
     1561 agctcgtcga cggcaccatg cgctactgca acatgaccaa tggcggcccg gtgtttgtgc
     1621 acgtcaagga tggcaagatc gtgcgtatga cgccgatcga ttttgacgaa accgacccgc
     1681 agccgtggac catagaggcg cgcggcatca agctgacgcc gccgcgcaag accacgctgg
     1741 cgccccacgg ccagaacgcg aaatcgatcg tctattcgcc ggaccgcctg ctccacccga
     1801 tgaagcgggt cgatttcggc gccaacggcg aacgcaatcc acaaaatcgc ggcaagtccg
     1861 gctacgtgcg gatttcctgg gacgaggcgc tcgacctcgt cgcttctgag atcaagcggc
     1921 tcaagagcac ctatggcccc ggcgtgatgg cggtgtcaca tggctcgcac catacctggg
     1981 gaaacatcgg ctactatctt tccgcgctgc accgctttcg caatgccgtc ggctacaccc
     2041 aggtccatca caatccggat agctgggagg gctggtactg gggcgcggtg catcattggg
     2101 gtcacacgct gcgagtcggc cagtcagaga cctacggcac cgtcgaggac tgtctgcaga
     2161 actgcgacat gatcgtgttc tgggcggccg atccggaaac caccagcggt tcttatgggg
     2221 cgcaagaggg cacgatccgc cggcagtggc tcaagaaccc caagctcggc atcaaggtgg
     2281 tgcacgtcga cccgtacttc aacgcctcgg cgcaattcct gccgggcaaa tggctggcgc
     2341 cccggcccac gacctcggtc gccatggcga tggcgatcgc ctatgtgtgg atcaaggaag
     2401 gcctttacga cgaagattac gtgcgcaccc acacggtcgg tttcgacacc tggagggatt
     2461 acctcctcgg catcgagagc ggcgtgccca agacgcccga gtggcaggag cgggaaaccg
     2521 gcgttccagc caaagacgtg cgcgcgctcg cgcgagagtg gggcaagaag cgcgtttatc
     2581 ttgcgcccgg cggctggggc aacggccacg gcggcgcctg tcgtaaccag accggcattc
     2641 agtgggcgcg ggtgatggtg tgcctcaccg ccatgcaagg gctcggcaag cccggtgtca
     2701 acatgggcaa tctgcaatgg ggctgtccgc tcgatttcaa tttctatttt ccgggctacg
     2761 ccgacggcgg catgtcgggc gacctcgaaa acacctcgat gccgatcgag ctgtaccagc
     2821 gcatgccgca actgccgacc atttcgtcga cgttccaacg tatcccgcgc atctggatgc
     2881 cggaggcgat cgccgatggc aaggccgagg gctatgcctg ggtcggcaag tcaatcgagc
     2941 accagtttgc gaaatttgct tatccggcac ccggccacgc gccggtgcgg atgctctata
     3001 agtacggcgg ctcaatgctg tcgaccatga acaacaccaa ccgccatgtg cggatgtacc
     3061 aatcggagaa tctcgaattc gtcgtcaacc agtcgatctg gttcgagggc gaagcgaaat
     3121 tcgccgacgt catcctaccg gcctgcacca atttcgagcg cgtcgacatc agcgaatggg
     3181 cgggcctcgg cggctacggt caccacggtc agcagcagct caaccaccgc gtcatcatct
     3241 tccaggcgcc cgcgattgcg ccgcttgggg aatccaaatc cgactactgg atattcaccg
     3301 agatctgcaa gcggctcggc ctcgccaatt atttcaacga aggcatgaac gagatcgatt
     3361 gggtcaagcg cctgttcgac gcctccgacc tgcccaagca catatcctgg aaggagttca
     3421 tccgccgggg ttactacgtg gtgccggcag agaaggagaa gctgcgcgcg ccggtgtcgt
     3481 tccgctggtt ctgggagaac cgcaagaaag atgtgcccga gcaccagccg ctgccgtccg
     3541 actacaccgg cgaattcctg cgcgggctgc agacccagtc gggcaagctc gaattcgagt
     3601 gcaacagcct caagcgcttc aatgatcccg agcggccgcc gatcgttaaa cacgagccgt
     3661 cgtgggaagg gccgcattcc ggtgagatgt tcgcgcgtta cccgctgcag atgc
//
LOCUS       DATILV010000875         2830 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_468153, whole genome shotgun sequence.
ACCESSION   DATILV010000875 DATILV010000000
VERSION     DATILV010000875.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2830)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2830)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2830
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_468153"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..855)
                     /locus_tag="VLJ17_21195"
     CDS             complement(<1..855)
                     /locus_tag="VLJ17_21195"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSV25530.1"
                     /translation="MNAIGQPISRIDGGLKVTGTARYTGDIRLADEVHGVIVASTIAN
                     GRTLSIDTTAAEKAAGVLAVFTHRNMPRMNPTPKPWSHLRPHGQSYLPLQDEKILYAD
                     QPIALVIAGTVDQASYAGTLIKVEYDAQRPVVFGPETLKDAVEPPQFLWPVASSVGDA
                     DKAIAASAVRIERTYTTCDRHHNPMEPHATTATWDADGVLTLYETTQHIFGTKELVSI
                     VLGIPPEKINVVCQFLGGGFGCKGYVWPHTLLAALAAKILNRPVRIQLTRAQLYSMVG
                     HQPASIQTI"
     gene            complement(852..1847)
                     /locus_tag="VLJ17_21200"
     CDS             complement(852..1847)
                     /locus_tag="VLJ17_21200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007593279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HSV25531.1"
                     /translation="MHPFTISSATDPATAIAVHAGDPQLAFIAGGTDLLGLIKDRAAL
                     PERLLDINTLPNMARIEALPDGGLRIGALARMSDVAAHAEVRRRFPVIAESLLFAASG
                     QLRNMASMGGNIMQRTRCAYFRDEDGLPCNKRRPGSGCSALYGINRNHAIFGWSDECV
                     ATNPSDVAVAFAALDANVIVSGRGGQRSIPFAEFHRLPGDTPERDNVLERGDLIMAIE
                     VPARIEGRASYYLKIRDRQSYEFALVSTAAAVDTDGARIRSARLAMGGVAHKPWRLSA
                     AEAALQGLPLGDIDALSAAIATSFTDARPLAHNAFKVDLAQRVALRALQTAGART"
     gene            complement(1851..2363)
                     /locus_tag="VLJ17_21205"
                     /pseudo
     CDS             complement(1851..2363)
                     /locus_tag="VLJ17_21205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017273324.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
     gene            complement(2568..2807)
                     /locus_tag="VLJ17_21210"
     CDS             complement(2568..2807)
                     /locus_tag="VLJ17_21210"
                     /inference="COORDINATES: protein motif:HMM:NF016139.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF417 family protein"
                     /protein_id="HSV25532.1"
                     /translation="MFISTTSIIPFLPDAWAKSAGGFPAMTDMVAFLMKDIGLLTLSL
                     YLLRQDLIRVLRSTTSLVPSPATHVQQQSEVPRAY"
BASE COUNT          568 a          818 c          853 g          591 t
ORIGIN      
        1 aatcgtctga atgcttgcgg gttgatggcc aaccatcgaa tacaactggg cgcgggtaag
       61 ttggatgcgc actggtcggt tcaggatctt cgcggcaagg gccgccagca acgtatgcgg
      121 ccagacgtaa cctttgcagc cgaagccccc acccagaaac tgacacacaa cattgatttt
      181 ctctggtggt atgccaagca ctatcgacac tagttccttc gtgccgaaga tatgctgggt
      241 cgtttcatag agagttagca cgccgtccgc gtcccatgtt gccgtcgttg cgtgcggctc
      301 catcggattg tggtggcgat cgcacgtggt gtaggtccgc tcgatcctta cggcgctggc
      361 ggctatcgcc ttgtctgcat ctccgaccga cgacgcgacg ggccacagaa attggggagg
      421 ctcgacggcg tccttcagtg tctcagggcc gaacacgacc ggccgctgag cgtcgtactc
      481 aaccttgatc agtgtcccgg catagctcgc ctggtcgacc gtccccgcga taactagtgc
      541 gatcggctga tctgcgtaga ggattttttc atcttgaagg ggcagatacg attgcccgtg
      601 aggacggagg tgactccacg gctttggcgt cgggttcata cgaggcatat tgcgatgcgt
      661 gaacaccgcc aacacgccgg cggctttttc ggcggcggtc gtgtcgatcg acaaagttcg
      721 gccatttgct atagtgctgg ccacgatcac accatgcacc tcgtccgcga gccgaatatc
      781 tcccgtatag cgcgccgtgc ctgttacttt aaggcctcca tcgatccgtg agattggttg
      841 tccaatcgcg ttcatgtacg tgctccggcg gtctgcaacg cgcgtaacgc aacgcgctga
      901 gcaaggtcga ctttgaaggc attgtgggca agcgggcgag catcggtgaa cgacgtggcg
      961 atagccgcgc tgagcgcgtc gatgtccccc aacggcaacc cctgcagcgc cgcttcggcg
     1021 gcgctaagac gccatggttt gtgcgcgacg ccgcccatgg ccagccgcgc cgaacggatg
     1081 cgcgcaccgt cagtatcaac cgcagccgcg gttgatacga gcgcgaactc gtaggattgc
     1141 cgatcacgga tcttgaggta ataagaggcg cgcccctcga tccttgcggg cacttcgatc
     1201 gccatgatga gatcgccccg ttcgagaacg ttgtcacgct ccggcgtgtc tccaggcagg
     1261 cgatgaaact cagcgaaggg gatcgatcgt tgtccgcctc gtccgcttac gatgacattt
     1321 gcgtccaagg ccgcaaatgc caccgccacg tcggagggat tggtggccac gcactcgtcg
     1381 gaccatccga agatagcgtg attccgattg atgccgtaga gggccgagca gccggagccc
     1441 ggccgtcgtt tgttgcatgg gaggccatct tcgtcgcgga agtaggcaca gcgagtgcgc
     1501 tgcatgatgt tgccacccat tgaggccatg tttcggagtt ggccggacgc agcgaacagg
     1561 aggctttcgg cgatcaccgg gaagcgacgg cgcacctccg catgcgctgc cacatcgctc
     1621 attcgggcca gcgcgccgat gcgcagccca ccgtccggta aggcttcgat ccgcgccatg
     1681 ttgggcaagg tgttgatgtc caacagacgc tcgggaagcg ctgcgcggtc cttgatcagg
     1741 ccaaggagat cggtgccgcc ggcgatgaaa gcgagctggg gatctccggc gtggactgca
     1801 atcgctgtcg ctggatcggt ggcgctcgaa atggtgaagg gatgcatggc ttaactccta
     1861 cgcattgctt cagccacggc atcgacgata ttgggatagc aggcacaccg acagagattg
     1921 ccgctcatcc gctcgcgaat ctccgcctcc gacagatcag ccagagtgaa tggctttgtg
     1981 acgtccgtcg tggcagcact cggccagcct gcttttgcct cctcgatcat cgcgacagcc
     2041 gacataattt gcccagatgt gcagaagccg cactggaaac cgtcgtgctc gatgaacgcc
     2101 tcttggagtg ggtgaagctg gccgtcccgc gccaaccctt caatggtggc gatctgttga
     2161 ccatcatgca tcgccgccag ggtcatgcag gacaggacgc gccggccttc gatatgaacc
     2221 gtacatgccc cgcattcacc gcgatcacac gatttcttag gaccagtcaa ggccaattcc
     2281 tcgcgcaacg catcgagcag cgtcatgcgt ggctcgactg ttagcgcgcg gacggagccg
     2341 ttgactatca tgctcacatg aacgcgtgcg tcccttggcg cttgcgtgtg gatagcagcc
     2401 atgttttgtt ttcctttctt ttcgattcac aatacagctg ggcgttgttc acaatccgcg
     2461 aaggtggagc gggacagccg tgatgagtat taagaaagca aagatctcca tcggatcctc
     2521 ctttctacgg gcggtcacgt ctttgtatga tcgaattgat agcttggcta ataggcacgc
     2581 ggaacctcag attgctgctg gacgtgagtc gcaggcgatg ggactaaact tgtggttgaa
     2641 cgtaatactc tgattaggtc ctgccgcagc aaatatagag acagcgtcag aaggccgata
     2701 tccttcataa ggaaagcgac catgtcagtc attgcgggaa atccgccggc agattttgcc
     2761 caggcgtctg gcagaaacgg aatgatcgag gtggtcgaga tgaacacaaa acaagccccg
     2821 atggctccga
//
LOCUS       DATILV010000876         6632 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3288499, whole genome shotgun sequence.
ACCESSION   DATILV010000876 DATILV010000000
VERSION     DATILV010000876.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6632)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6632)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6632
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3288499"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..186)
                     /locus_tag="VLJ17_21215"
     CDS             complement(<1..186)
                     /locus_tag="VLJ17_21215"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSV25533.1"
                     /translation="MRSAIVTGGQGFIGRYLVKALQRNGVNVKTLGRRKGAETTHFVL
                     DEPSWDSPALDRVLVDTA"
     gene            complement(179..976)
                     /locus_tag="VLJ17_21220"
     CDS             complement(179..976)
                     /locus_tag="VLJ17_21220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018268921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HSV25534.1"
                     /translation="MNKPIWPFHQTSTDQHHLAFERPSVLVRQAVIMAGGKGTRLHPY
                     SALFPKPLMPLGDKPILELLLRRMKAAGVQEVIIAVNHLRHLIEAYFGDGSAIGLRLR
                     YSTEDKPLGTAGALGNMLDLLDDTFFLANGDLLTTMDLGRMAFSHISERADASVGIYE
                     RENKIDFGLIEIDSRNRLRVYREKPINKYYVSMGVYILQREAVLPHVFNVDYLDMPNL
                     LLKIKSSNGNVVCFQDKCVWLDIGRPDDFALAQQMFEQDRGAFLDHA"
     gene            complement(1359..3275)
                     /locus_tag="VLJ17_21225"
     CDS             complement(1359..3275)
                     /locus_tag="VLJ17_21225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25535.1"
                     /translation="MNVGWLCLVAVGISTICAACCYVTAALAQGPTLVKREILALYDG
                     AQEGADANLTRIHRFAEMPLNHLGFILRFRDIRAKLPEPAEVERYRGVLTWFVGSVSD
                     SNAYLAWASQVSRMNVHYVILGDVGGAINPDNFTAVNRLLDLSGLRHTGDYVTPTVTT
                     RIVQNDPDLIEFECRLGPALPDYPVINVARAGTRVGLLLETPEHDGKRQTALVAIGNK
                     GGYAALNYEFCHQRPPLYQGKWLINPFAFFRAALGFDDFPVPDTTTASGRRLYFSQLK
                     SDGWTRSSKIDGFRDTETMAAEVVLRELINPFHDLPTTIDLQEHELASSGRSAGQARL
                     IMQRALAGPNVDPSRRHLRMTLSRFDPEYPSISNLSPLISAGPEPAVNSPMSDETAYS
                     GVGPVGENGFFVLKETLTNTDSPRRLKPFNLNYHAYVGEYPALLQSVREQLQGASVTA
                     LTPVSANRYASIVDGFFTARIDRVASATWQIHNRGALQTVRFDQADGKEVDLRSSIGV
                     IGESHNGSVLYVALDEAIEPAVVVLSSHPLSPTVHNGLALVESRWLLRNIVNGECGLS
                     FEAQGYGNGAFSWSGAAHGRYVVTVVRSGAEVWRQNAEGDDTGRIDFVLPVSATDPVI
                     VRMSCAGAGGSAAP"
     gene            complement(3453..4808)
                     /locus_tag="VLJ17_21230"
     CDS             complement(3453..4808)
                     /locus_tag="VLJ17_21230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030253 - protein secretion by the type I
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HSV25536.1"
                     /translation="MTASVLPLNRNQRHSTEVRVPAASPDVAELRRPLAVGLALSGLI
                     VFAVFVWGGFAKLSGAVIARGIVVVDSNSKKIQHLQGGVIRQILVKNGTRVAAGDVLV
                     RLDDTQTRASLGIVSSQLTELVGRKARLAAERDNLDELSFPPEFTAAGPEAERVASGE
                     RRLFDARLTALNGQKAQLRERIKQYDEERNGLNLQNSAKTRELSLIRQELSRVDDLFQ
                     RNLLPVTRVLSLQRDETRIEGEVGTLTAQTAKLGGQIAETQLQIIALGQNRLSDAQKE
                     LREVEGRIAELEERKIAVEDQLQHIELKSPIDGTIHELSVHTVGGVINPAEQLMLVVP
                     SSDSLNVEVRIPSSDIDQLQTGRQGVLRFTAFNQRTTPEVKGTVTGISPDAVRDSESG
                     QFYYTARITPDENDIAQLGGHKLIPGMPVEAFIETSPRTALSYLTKPLVDQFGRAFRE
                     R"
     gene            complement(4836..>6632)
                     /locus_tag="VLJ17_21235"
     CDS             complement(4836..>6632)
                     /locus_tag="VLJ17_21235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I secretion system permease/ATPase"
                     /protein_id="HSV25537.1"
                     /translation="GGGPSKQSCTDFPEPIYFSLRGRTLPETLHDQAAIRSSRFAAAF
                     DGFRGAILAVCVISGIINVLALTGSFYMLQVYDRVLSSHSVPTLVSLSVLALVLYAFH
                     GALDMLRNQASGRGAVLFDRRMARPVHTAVVRLPLKGTSSSMAQQPMRDVDTIRTFLA
                     NGGPVAFLDLPWMPLYLAFVFLLHPLLGLMCFAGMLLLVLLMFLTERLSQNEVQASAR
                     ADAARKAIADTHARNAEILQAMGFADRAVRRFEALNQSYLALQIKANDVISKLTAVSK
                     FLRFTLQSAILGLGAYLTVRGEVTGGVIIAASITTSRALAPVEQVIAHWRNFLAARQS
                     FDRLARTLDKFPPARLPLALPAPAKRLSLENVAVCVPGTERLVLFNIGFELRCGQALA
                     VIGPSAAGKSSLARAITGVWPLLRGSIRLDGAELDQWAPDELGQHIGYLPQDVTLLEG
                     TIADNICRLEDMKDGGAIVAAAKAAGVHDMILHLPDGYETNVGPDGSALSAGQRQRVA
                     LARALFRDPFLVVLDEPNSNLDAEGENALTAAIQGVRDRSGIVLVVAHRPSALNAVDH
                     VAMISSGQLIAFGPKDEVLKKVLLHPIRTAAN"
BASE COUNT         1435 a         1929 c         1903 g         1365 t
ORIGIN      
        1 cgctgtgtcc accagaacgc gatcaagggc aggggagtcc caagacggtt cgtcgaggac
       61 gaagtgcgtc gtttcagcac ccttccggcg cccgagcgtc ttgacattga cgccgtttcg
      121 ctggagggcc ttgacaagat atcggccgat gaacccttgc ccgcccgtta cgattgcact
      181 acgcatgatc cagaaatgcc ccacggtctt gctcaaacat ctgctgagca agcgcgaagt
      241 cgtccggccg cccgatatcg agccaaacac atttgtcttg aaagcagacg acgttaccat
      301 tgctggattt aatttttagc aaaaggtttg gcatatcaag ataatcaaca ttgaaaacat
      361 ggggtagaac cgcctcacgt tgaaggatgt aaactcccat actaacgtaa tacttattta
      421 tcggcttttc cctatagacg cgaagcctgt ttctgctatc gatctcgatc agtccaaaat
      481 cgatcttgtt ttcccgctca taaatgccga cagaagcatc ggcgcgctcg gaaatgtggc
      541 taaaggccat gcgcccaagg tccatggtcg tgagcaggtc gccgttggcc aggaagaacg
      601 tgtcgtcaag caggtcaagc atgttgccga gtgcacccgc agttccaagc ggcttatctt
      661 cggtgctata acgaaggcgc aatccaattg ctgagccgtc gccaaaatac gcttcgatta
      721 aatgtcggag gtgattgacc gcaatgataa cctcctgaac gccggcagct ttcattcttc
      781 gtaacaggag ttccagaatc ggcttatcgc ccaatggcat cagtggcttt ggaaacagag
      841 ccgaataagg gtgcagccgc gttcctttgc cccctgccat gatcaccgct tgacggacca
      901 gcaccgaagg gcgctcgaag gcaagatggt gttgatcggt cgaagtttga tggaacggcc
      961 aaatcggttt gttcatcgtc gaccccattt ttgttgcgac ggctgaattc atctttgtac
     1021 tgtggtcgga ttcataaaac agcggacggc tatatcttct tgttatttag agaaacgtgt
     1081 tatgatatgc agttaactgt ccacaccagc atagtgttcc actgtggaca aagccaatgt
     1141 aaaaatctga tttgcgtcag ccctaagaca ggatcttgtc acatagcacg catcggattg
     1201 tcattatcca gaatcaatct tcaatcaggc taataatttt gcctcgaatc gagcgtgcca
     1261 tcaatgttgg gcgcgcccgc tcagtcgggt gccgcaccta atgacgttcg ttagctggta
     1321 ctagatcccg atagaacttt agatcaaccc attgctcgct acggtgcagc ggaaccaccg
     1381 gcccccgcac agctcatcct aactatgaca ggatcggtcg cgctcacggg taagacgaag
     1441 tctatccttc ccgtatcgtc gccttccgcg ttctgtcgcc atacctccgc gccggatcga
     1501 acaactgtta cgacgtagcg gccgtgagct gcacccgacc aagagaacgc tccattaccg
     1561 tagccctgcg cctcaaagct caatccgcac tcaccgttga caatgttgcg caggagccat
     1621 cggctttcga caagtgccaa gccgttatgc accgttgggg agagcgggtg agagctgagg
     1681 acaacgactg ccggctcgat cgcttcatcg agtgcgacat aaagtactga cccgttatgg
     1741 ctttccccaa tcaccccaat actggaccgc agatcaacct ccttaccgtc ggcctgatcg
     1801 aaacgaacgg tctgtaacgc gccgcgattg tggatctgcc aggtcgcgct ggcgacacga
     1861 tcgattcgtg ccgtaaagaa tccatccaca atggaggcgt aacgattcgc cgaaacgggg
     1921 gtgagcgcgg tgacgctcgc cccttgcagc tgctccctca ccgattgaag caatgccgga
     1981 tactcgccca cataggcatg gtagttgaga ttgaatggct tgagccgtcg tggtgagtcg
     2041 gtgttggtca aagtctcctt gaggacgaaa aatccgtttt ctccaaccgg gcccacgccg
     2101 ctatacgccg tttcatcgct cattggcgag ttaacagcgg gctcaggacc cgcactgatc
     2161 agaggggaca gattcgagat cgacggatac tcgggatcaa acctcgacag cgtcattcgc
     2221 aggtgacgtc tcgacggatc gacattcggc ccggccagcg cgcgttgcat gatcagacgg
     2281 gcctgcccgg cgctccttcc agagctcgcg agctcatgct cctgcagatc aatcgtcgtc
     2341 ggcaagtcgt ggaacggatt aatcagctca cgaagaacga cctcggcagc catggtttcg
     2401 gtgtcgcgga agccgtcgat cttgctcgag cgcgtccagc cgtcgctttt aagctgactg
     2461 aaatacagtc ggcgaccgga tgcggtggtg gtatccggaa ccggaaaatc gtcgaagcct
     2521 aatgcggcgc ggaaaaatgc gaatggattg atgagccatt tcccctgata caacggtggc
     2581 cgttggtggc agaattcgta gttcagtgcc gcatagccac ctttgttacc gatcgccaca
     2641 agagctgttt gcctttttcc atcgtgctcg ggcgtttcga gcaataaacc gactcgcgta
     2701 cctgccctgg ccacattgat gaccggatag tcaggcagag cggggccaag gcggcattcg
     2761 aactcgatca ggtccgggtc gttttgcacg atgcgtgtcg tcacggtcgg cgtaacataa
     2821 tcgccggtat ggcgcagccc ggacaaatcc aacaatcgat tgacggccgt gaaattgtcc
     2881 ggattaatcg cgcccccaac atctcccaag atgacgtagt gcacattcat tcgcgaaact
     2941 tggctcgccc acgcgagata ggcgttgctg tcggaaaccg atccgacaaa ccaggtcagc
     3001 acgcctcggt aacgctcgac ttcagccggc tcgggcagct tcgcgcgaat atcgcgaaat
     3061 cgcaggatga aacccaggtg gttgagcggc atttccgcaa aacgatggat ccgcgtgagg
     3121 ttagcgtctg caccctcttg cgcgccgtcg taaagggcga gtatctcgcg cttgacgagg
     3181 gtgggcccct gtgcaagtgc cgcagtgacg taacaacacg cggcacagat tgttgagatg
     3241 ccaacggcaa ccaagcaaag ccaacctacg ttcatcttgc cgccaaatga ggagcagcag
     3301 ccagtgtggc ccccagggct cctgcactgg ctctcctcgg gtatgcgtcg ggccgggcga
     3361 atgtttgtgc ttggtatccg cattgacatc accattcgat cccaacgaga acggactggt
     3421 ttcggccacc ggtatcgtat ttcaaaggtc tttcatcgct cgcgaaaggc gcgtccaaac
     3481 tgatccacga gaggtttcgt cagataggag agtgcagtac gcggtgacgt ctcgatgaag
     3541 gcttcgaccg gcattccagg aatcagtttg tggcccccaa gttgggcgat gtcgttctcg
     3601 tcgggcgtga tgcgagccgt gtagtagaac tgtcccgatt cgctatctcg aacggcgtcc
     3661 ggcgagatgc ctgtcacggt tcctttcact tccggcgtcg tgcgctgatt gaaggccgtg
     3721 aaccgcaaca cgccttgccg tccagtttgc agttggtcga tatcggagct tgggatgcga
     3781 acctcaacat tgagcgaatc actgctagga acgaccagca tcaactgttc ggccggattg
     3841 atcacgccac cgacagtgtg aacgctaagc tcatgaatag tcccgtcgat cggggacttg
     3901 agttcgatgt gttgcagttg atcctccacc gctatctttc tttcctccag ctcggcaatg
     3961 cggccctcga cctcccgcag ctctttttgc gcgtcggaaa gccggttctg accgagggcg
     4021 atgatttgca gctgcgtttc cgcgatctga ccaccgagct tggcggtttg cgccgtcaac
     4081 gtcccgacct cgccctcgat gcgggtctcg tcgcgctgca agctgaggac gcgcgtgacc
     4141 gggagcaggt tacgctgaaa gagatcatcg acccgtgata gttcctggcg gatcaggctc
     4201 aactcgcggg tcttggcaga gttctgcaga ttgagcccat tcctctcttc gtcgtactgc
     4261 ttgatgcgct cgcgcagctg cgctttctgt ccgttcaacg ctgtgagtcg cgcatcgaac
     4321 aagcgtcgct caccgctggc gactcgctct gcttctgggc cggcagcggt aaactcgggt
     4381 gggaatgaca actcgtcaag attgtcacgc tccgcagcca atcgtgcctt acgaccgact
     4441 agctcagtca actgcgagga gacaatacct agtgacgcac gcgtctgcgt atcgtccagt
     4501 ctgaccagca catcgccggc ggcgactcgg gtaccgttct tcacgagaat ctgtcggatc
     4561 acgccgccct gcagatgctg gatcttctta ctattgctat cgaccaccac aatgccgcgt
     4621 gcgatcacgg ctcccgacag tttcgcgaag ccaccccaga caaaaaccgc gaacacgatc
     4681 aatccggaaa gggcgagacc gacggccagg ggccgtcgta attcggcgac atctggcgat
     4741 gcggccggaa cgcgaacctc tgtcgagtgc cgctggtttc tgttcagagg cagaaccgaa
     4801 gctgtcatgc tgggactcgc tctcgcttca cttcgtcaat tggctgcggt tcggatcgga
     4861 tgcaggagga ccttcttgag cacctcatcc tttgggccga acgcgattaa ctgccctgag
     4921 ctgatcatcg caacgtgatc gacagcgttt agcgcgctcg gccggtgggc gacgacaagc
     4981 acgatgccac ttcggtcgcg gaccccttgg atcgctgcag tcaatgcgtt ttcgccttcg
     5041 gcatccagat tcgaattcgg ctcgtcgaga acgacgagaa aggggtcgcg gaacaacgcg
     5101 cgggcgagcg cgacgcgctg gcgctggcct gccgacaatg ctgaaccgtc cggcccgaca
     5161 ttcgtctcgt agccgtcggg gaggtggagg atcatatcgt ggacaccagc cgccttcgcg
     5221 gctgcgacga tcgcaccgcc atccttcatg tcctcgaggc ggcatatgtt gtccgcgatc
     5281 gtgccctcga ggagcgtcac gtcctgcggg agataaccga tgtgctgccc aagttcgtcc
     5341 ggcgcccact gatcgagttc ggcgccgtcg aggcgaatgg agccgcgcaa cagcggccac
     5401 acgcctgtga tcgcacgtgc cagcgacgac ttgcccgccg cgctggggcc gatcactgcc
     5461 agagcctggc cgcatcgcaa ttcgaagccg atattgaaca gaaccagacg ctccgtgccc
     5521 ggcacgcaca ctgcgacgtt ctctaacgag agccgtttgg ccggggccgg cagggccaaa
     5581 ggcaggcggg cgggcggaaa tttgtcgagc gtcctcgcca gacgatcaaa gctctgccgt
     5641 gcagccaaaa aattgcgcca atgcgcaatc acctgttcga cgggagccaa cgcacgggag
     5701 gtggtaatcg aggcggcgat gatcacgccg ccggtgactt cgccgcgaac ggtcagatac
     5761 gctcccaacc cgaggatggc cgattgcaag gtgaagcgca ggaatttcga cacggcggtc
     5821 agtttcgaga ttacgtcgtt cgccttgatc tgcagcgcca gatagctctg attgagcgcc
     5881 tcgaaccggc ggacggcacg gtcagcgaat cccatggcct gcagtatttc ggcatttcgc
     5941 gcatgggtgt ctgcgatggc tttgcgcgca gcatcagcac gcgcgctcgc ctgcacttcg
     6001 ttttgcgaaa gccgctcggt caggaacatg agcaggacaa gcagtagcat gccggcaaaa
     6061 cacatgaggc cgagcaaggg atgtaacagg aagacgaaag cgagatagag cggcatccac
     6121 ggcaagtcta ggaaggcgac cggaccgccg ttggcgagaa atgtgcggat ggtgtcgacg
     6181 tcgcgcatcg gctgttgagc catcgaactt gatgtgccct taagaggcag acggacaacc
     6241 gcggtatgca cgggacgcgc catgcggcga tcgaagagta ccgcaccccg gccggaagcc
     6301 tggttacgca gcatgtcgag tgccccatgg aaggcgtaca ggaccaacgc gagcacagac
     6361 aacgaaacga gcgtcggcac gctgtggctt gatagcacgc gatcgtagac ctggagcata
     6421 tagaaggaac cggtaagtgc cagcacgttg atgatgccgg agatcacgca gacggcgaga
     6481 atggcgccgc gaaatccgtc gaaggcagcg gcaaagcgcg aggaacggat cgcggcctga
     6541 tcgtgtaacg tttccggcaa cgtcctgccc cgcaatgaaa agtagatcgg ctccgggaag
     6601 tccgtgcagc tctgcttcga tggcccgcca cc
//
LOCUS       DATILV010000877         4418 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_5068130, whole genome shotgun sequence.
ACCESSION   DATILV010000877 DATILV010000000
VERSION     DATILV010000877.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4418)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4418)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4418
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5068130"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(63..138)
                     /locus_tag="VLJ17_21240"
     tRNA            complement(63..138)
                     /locus_tag="VLJ17_21240"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(102..104),aa:Glu,seq:ctc)
     gene            complement(206..547)
                     /locus_tag="VLJ17_21245"
     CDS             complement(206..547)
                     /locus_tag="VLJ17_21245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25538.1"
                     /translation="MSNPDTDDDEPLSPAQAQIVARVRWLMLISGIATMLGIAVVVTV
                     IGYRVFRTEGRPGPVEATTLLPKGARVVSTSVAGDRIVVTVDIGGTLEVRTFDAKTLS
                     PEGRLRFVVEP"
     gene            546..1589
                     /locus_tag="VLJ17_21250"
     CDS             546..1589
                     /locus_tag="VLJ17_21250"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011471088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HSV25539.1"
                     /translation="MREFEVEAPIVQTATIAAAEAGQRLDRALAVLMKDLSRSRLKAL
                     ILAGHVAISGRTICDPSHRVNAGDEIIVAVPLAEPAEPRAENIPLAIVYEDADIVVID
                     KPRGLVVHPGSGNWTGTLVNALVAHCGTTLSGIGGVRRPGIVHRLDKDTTGLMVVAKN
                     DHAHRALAAQFADHGRTGPLQRGYLAFVWGTPDRPKGVIDKPIDRHPQARDRMAVRAG
                     GRDAVTLWEVVESYPAAGQRSAPMGAKRSRAGVASLLDCQLKTGRTHQIRVHLAAIGH
                     PLLGDDSYGPGFRTKAALLSEGAQATLRALSGQALHAYLLGIEHPTSGEEMVFRSELP
                     LELAALRLALGDS"
     gene            1903..2823
                     /gene="rpoH"
                     /locus_tag="VLJ17_21255"
     CDS             1903..2823
                     /gene="rpoH"
                     /locus_tag="VLJ17_21255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020187734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HSV25540.1"
                     /translation="MAQSATLPIITAESGLSRYLDEIRRFPMLEPHEEYMLAKRWREH
                     GDRTSAHKLVTSHLRLVAKIAMGYRGYGLPISEVISEGNVGLMQAVKRFEPEKGFRLA
                     TYAMWWIKAAIQEYILRSWSLVKMGTTANQKKLFFNLRKAKSRISALDEGDMRPDQVK
                     LIAKRLGVTEQDVIDMNRRLGGDASLNAPIREDGDSGEWQDWLMDERDSQEAALAATE
                     ELDNRRTALSDALNVLNDRERRIFEARRLADEPVTLEDLAVEFGVSRERVRQIEVRAF
                     EKVQKAVKNRVAAMEMPPARSANAPPMPAH"
     gene            3107..3364
                     /locus_tag="VLJ17_21260"
     CDS             3107..3364
                     /locus_tag="VLJ17_21260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25541.1"
                     /translation="MKRPWPLFSMLLVVLLLGADGARAADVYCRHDGIRIHDGGEYQE
                     NWYVLNSTVRRTQRPGQTKPTTGCSISWRSIGAMYRPAEII"
     gene            3365..3538
                     /locus_tag="VLJ17_21265"
     CDS             3365..3538
                     /locus_tag="VLJ17_21265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25542.1"
                     /translation="MPRLGSARIVSNYRIFYQSARSGQDRLTTRMQWTSGSSGKLMSA
                     IVHYNITVTDQPL"
     gene            complement(3651..>4418)
                     /locus_tag="VLJ17_21270"
     CDS             complement(3651..>4418)
                     /locus_tag="VLJ17_21270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25543.1"
                     /translation="SSIRTSIVTLARSFVATAHYLWGTAGNQPGVPNGNLGGGNKLNA
                     AQMRDPGLDPRETNSDKVLAVCIAVQPRFDGYNTCAGRSGRSQETPDLAAFLNACEQE
                     IKKGNTDQKSWPGAGFQNKLFPRKYYFRGTLQNPQKEVWGESCANIRHFDCVGLVNYC
                     YARHWYQPGFGLGISAFRQPVQGTQQVSNDNDRMDADILIKPGDGHIGMLYQKGENWY
                     VVQAVATTTGLTDTEPFSPKAWDRYRMNASYLRSMHD"
BASE COUNT          833 a         1322 c         1366 g          897 t
ORIGIN      
        1 cggcaggatg aagcacttga agttgcttgt tattcaagaa tgacggggac ttcttttatc
       61 cctggcgctc cctacgggaa tcgaacccgt gtttcagcct tgagagggcc gcgtcctaga
      121 ccgctagacg aagggagcgg gtgcgtttcg aaatagcccg gatcatcctg ccgcgcaagg
      181 cgtgccgcat cgtcggccgt tgtatctagg gctcgaccac gaaccgcagc cggccctccg
      241 ggctcagcgt tttggcatcg aaggtgcgga cctccagcgt accgcctata tctaccgtaa
      301 ccacgatacg atcgccggcg accgatgtcg aaaccacgcg ggcgcccttg ggcagtaggg
      361 tcgtggcctc caccgggccc ggccttccct cggtgcggaa aacgcggtag ccgatgaccg
      421 tgacgacgac cgcgatgccc agcatggtcg cgataccgga tatcagcatc agccagcgga
      481 cccgggcgac gatctgcgcc tgcgccggac tcagtggttc atcgtcgtcg gtgtcagggt
      541 tactcatgag ggaattcgag gtagaggcgc ccatcgtgca gaccgcgacg atcgccgcgg
      601 ctgaggccgg ccagcggctc gatcgcgcgc ttgccgtcct catgaaggat ctgtcgcgct
      661 cgcgcctgaa ggcgctcatt cttgccgggc acgtcgcgat cagcgggcgc acgatctgcg
      721 atccgagcca ccgcgtcaat gcgggcgacg aaatcatcgt cgcggtgccg ttggcggagc
      781 ccgccgagcc cagagcggag aacatcccgc ttgcgatcgt ttatgaggac gccgacatcg
      841 tcgtcatcga caagccgcgc ggcctcgtgg ttcatcccgg gtccgggaat tggaccggca
      901 cgctggtcaa tgccttagtg gcgcattgtg gcacgacgct ctccggcatc ggcggggtgc
      961 gtcgccccgg catcgtccac cggctcgaca aggacaccac cggcttgatg gtggtggcca
     1021 agaacgacca tgcccatcgg gcacttgcgg cccagttcgc cgaccatggc cgcaccggac
     1081 ccttgcaacg cggctacttg gcctttgtgt gggggacgcc ggaccggccc aagggcgtaa
     1141 tcgacaagcc gattgatcgc catccgcagg cccgcgaccg gatggcagtg cgggccggcg
     1201 gtcgcgatgc cgtcacgcta tgggaggtgg tagaaagcta tccggccgcc gggcagcgct
     1261 cggccccgat gggcgcgaag cggagcaggg ctggggtggc aagcctgctc gattgccaac
     1321 tcaagaccgg acgtacccac caaatccgtg tccatctcgc cgcgataggc cacccgctgc
     1381 tgggcgacga cagctatggc ccgggtttta ggaccaaggc ggccctgctg tctgaaggcg
     1441 cacaggcgac attgcgggcc ctttccggcc aggcccttca tgcttattta ttgggcattg
     1501 aacacccgac cagcggcgag gagatggtat tccgctccga attgccgctt gaattggccg
     1561 cgttgcgctt ggcgctgggg gatagctaat tcgccgcaga ggtgctctgt gccttgggga
     1621 tggatcgctg accggaaaaa taacgcattg tttgcaacta gttgttagct tgaacgttat
     1681 cgcgtgtacg gttagtcact tctgcgtcac ggcgaagtga cgctatagcg ctgttttcgc
     1741 ctgattatac gtatatggtc ctttggcgat ggttgttcgc actcgcagca aaattccgga
     1801 attttccgga gttacaaagt tcccggctcc agctggctca atggagcggt ttggagcctc
     1861 cgcctgccga tctcgggggc ataacgtgag gagggcgctg taatggccca atccgctacc
     1921 ttacctatca tcacggccga gtcagggcta tcccgatatc tcgacgaaat ccggcggttc
     1981 ccgatgctgg agccgcacga agagtacatg ttggccaagc gctggcgcga gcatggcgac
     2041 cgcacctcgg cgcataagct ggtaactagc catttgcgtc tggtcgccaa gatcgccatg
     2101 ggctaccgcg gctatggcct gcctatttcc gaggtgattt cggaaggcaa tgtcgggttg
     2161 atgcaggccg taaagcgctt cgagcccgaa aagggcttcc gactcgctac ctacgcgatg
     2221 tggtggatca aggccgccat ccaggaatat atcttgcggt cgtggtcgct ggtgaagatg
     2281 ggcactaccg ccaaccagaa gaagctcttc ttcaacctgc gcaaggccaa gagccggatc
     2341 tccgcgctgg acgagggcga tatgcgccct gatcaggtca agctgatcgc caagcggctg
     2401 ggcgtcaccg agcaggatgt catcgacatg aaccgtcggc ttggcggcga cgcctccctc
     2461 aacgctccga tccgcgagga cggagattcg ggcgagtggc aggattggct catggacgag
     2521 cgtgacagcc aggaagccgc gctcgctgcg acggaggaat tggacaatcg ccgcacggcg
     2581 ctttccgatg ctctcaacgt gctcaacgat cgcgagcggc gcatcttcga ggctcgccgg
     2641 ctcgccgacg aaccggtgac actcgaggat ctcgcagtgg aattcggcgt atcgcgtgaa
     2701 cgggttcgcc agatcgaagt gcgggcgttc gagaaagtcc agaaggcggt caagaaccgt
     2761 gtcgccgcca tggaaatgcc gcccgcgcgc tccgccaatg cgccgccgat gccggcgcat
     2821 tgagccggct agatccggtc ccgagttctt tcaaagcggt ttgtcatcgc ccgcgaaagc
     2881 gcgcggtccg taaccccatg atgttggggc acatcccaga gggagtactg gatgcctgct
     2941 tgcgcgggaa tgacaacgtt tgattcactt aacctcggag gagtccttta ggtaaggctg
     3001 cggctgcacg ctgatttttg ctggacccgt tcggaattcc tcgctttcgc tagcgctcgc
     3061 ctcattttgc gcgttaccat ccggggcgag tgcggggaag aaaatcatga aaaggccctg
     3121 gcccctattt tctatgcttc ttgtcgtcct gctgctcggc gccgacggtg cgcgggcggc
     3181 agacgtatat tgccggcacg atggcatacg catccacgac ggcggtgaat atcaggaaaa
     3241 ctggtatgtg ttgaactcca cggtgcggcg tacgcagcgg cccggccaga ccaagccgac
     3301 gaccggatgc agcatcagtt ggcgttcgat cggcgccatg tatcgcccgg ccgagatcat
     3361 ctaggtgcct cggttgggct cggcgcgcat cgtcagtaac tatcggatct tctaccagtc
     3421 cgcccgcagc gggcaggacc gcctgaccac ccgcatgcaa tggaccagcg gcagctcggg
     3481 gaaactcatg agcgcgatcg tacactacaa cattacggtg acggaccagc cgttgtgagg
     3541 ggaggcgcgg atcgaactgc ttctttcatc ccgggattaa gccgcatagg ggtttcttct
     3601 ggtcgtctac gctgacggcc ccccgtccag cgatttggcc ggagccctga tcagtcgtgc
     3661 atgctcctta aataactggc gttcatacga taccggtccc atgctttggg actgaacggt
     3721 tcagtatccg tgagcccggt ggtcgtggcg accgcctgca cgacgtacca gttttctccc
     3781 ttttgatata acatgccgat gtggccatcg cctggtttga tcaggatatc cgcgtccatc
     3841 cgatcgttgt cattgctaac ctgctgcgtg ccttggaccg gctgtcgaaa tgccgaaatg
     3901 cccaacccga agcctggttg ataccaatgt ctggcgtagc aataattcac caatccgacg
     3961 caatcaaagt ggcgaatatt ggcacagctc tcaccccata cttctttttg tggattctgg
     4021 agcgtgcccc gaaaataata tttacggggg aagagcttgt tttgaaaacc ggcaccaggc
     4081 catgatttct ggtcagtatt tccctttttg atctcctgct cgcacgcgtt caggaacgcc
     4141 gccaaatcag gcgtctcctg agagcgaccg gagcgaccgg cacatgtgtt gtagccatca
     4201 aatcgcggct gcacggcgat gcagaccgcc agcactttgt cgctattggt ttcgcgggga
     4261 tcaagtcccg gatcacgcat ttgcgccgca ttgagcttgt ttccccctcc gaggtttcca
     4321 tttggaacgc caggctgatt gcccgcggtg ccccagaggt agtgggcggt tgcgacgaaa
     4381 gatctcgcca aggtcacgat gctggtgcgg atgctaga
//
LOCUS       DATILV010000878         6835 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_987228, whole genome shotgun sequence.
ACCESSION   DATILV010000878 DATILV010000000
VERSION     DATILV010000878.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6835)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6835)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6835
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_987228"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            18..968
                     /locus_tag="VLJ17_21275"
     CDS             18..968
                     /locus_tag="VLJ17_21275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV25544.1"
                     /translation="MGRRTFLSAAAAAAATGVLGASAGHAQQAVPNTTGTDPARSKAP
                     ANAADCHMHIYDPRFPEPNPRPGRNPQNATVSDYRLLQKRTGTTRVVVVQPRNYATDN
                     RVTIDALRQLGASARGVAVVHPTVTDAELKSLNDASIRGIRFSLGGTNAVVNWDMVEP
                     LSRRVNEFGWHVQFNVDGDDIVAHADLLRRLPSQTVFDHLGHPTLPAGTGHPSHAVLR
                     GLLDKGRTWIKLSGAYSNSKVGPPDYPEAARIAEAFVKAAPERLVWGSDWPHPSEQNG
                     TLPDDGLLFDLLAVWAPDEATRKRILVDNPENLYGFAKTG"
     gene            1593..1826
                     /locus_tag="VLJ17_21280"
     CDS             1593..1826
                     /locus_tag="VLJ17_21280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25545.1"
                     /translation="MTAIHASLNLPINEAPKDFRLRVPDRAHSQGHSLVSNPAPARIT
                     IVIDAPRATAKVLNPPTIDVTPEPARKLIDDAV"
     gene            2582..2980
                     /locus_tag="VLJ17_21285"
     CDS             2582..2980
                     /locus_tag="VLJ17_21285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25546.1"
                     /translation="MDIVTRIVAEALSEFLGQQFIVENKPGAVFAIAFAMIYAPTMDY
                     NWTLATYHPIQGIWQFGRAPPLAGGSPAMYWYGFVITAALGALVLTGLVALVPDKLLE
                     RVPWRNLTWIVILCSIAYITYVLLPYAIKT"
     gene            complement(3045..3170)
                     /locus_tag="VLJ17_21290"
     CDS             complement(3045..3170)
                     /locus_tag="VLJ17_21290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25547.1"
                     /translation="MRLCVDLGDPTALAVTAMLTTPQPRKPPDVHLTAYFAAAVI"
     gene            3607..5109
                     /locus_tag="VLJ17_21295"
     CDS             3607..5109
                     /locus_tag="VLJ17_21295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007689037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HSV25548.1"
                     /translation="MNTPVTSNSLASIKLKLPIQRGAYYGGRWHEPKSGRYAEQTNPG
                     TGDSLGRVADSGAEDVDAAVGAAKEAFVEWRCVPPLERARMLKGIARVLRENAGELAM
                     IDSTDCGNPLSEMIGDANVAAAQVEFFAGLVTEMKGHSIPQGPDRLNFSVREPLGVVG
                     RIVPFNHPFMFIAGKAAAPLAAGNTIVMKPPEQAPLSSLRLAELIDGLLPPGVFNLVP
                     GGKEAGAALATHPSVAKIALIGSVPTGKAVMRAAADTLKGVLLELGGKNALIAYPDAD
                     PDAVAAGVVGGMNFTWCGQSCGSTSRAFIHEEIHDDVIERIKVRIGRWKPGIPTDPAT
                     TMGAIISKAQFDRVMGYIDSAKSEGARLVTGGGRPNDPALANGLYIEPTVFAEVKSTM
                     KIAREEIFGPVVGVFRWSDEATMLAEVNAVEYGLTASIWTNDLGTAHRAAANVEAGFI
                     WINDVSKHFLGTPFGGYKQSGIGREECLDELLSFTQEKNININLGARHKG"
     gene            5167..5940
                     /locus_tag="VLJ17_21300"
     CDS             5167..5940
                     /locus_tag="VLJ17_21300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016839782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HSV25549.1"
                     /translation="MIELSATLRRCAFVGAALVCAMGAHCAGIQRVSAQSAPDYAALM
                     AAPDRSDADRQADKRRDPVPFLAFAGLRPGMKVLDMGAGAGYSTELVARVVGPAGAVY
                     GQNPPDNFERARNAFAARAATPAMKNTMALVRPYDDPLPADVHDLDMITYLFFYHDTT
                     YLDVDRAQMNRKLFAALKPGGMMVIADHSAKAGSDPSVGKTLHRIDESMLRQEVETAG
                     FRFIAEGNFWRNPEDTRDFSTQRPSGPVDNFVLKFEKPR"
BASE COUNT         1358 a         2062 c         2078 g         1337 t
ORIGIN      
        1 tgaaagaaga ccaagccatc ggtcgtcgca cttttttatc cgcagccgcc gcggcggcgg
       61 ccaccggcgt gcttggcgct tcggccggcc acgcccagca ggcggtgccg aatacgaccg
      121 gcaccgatcc cgccaggagc aaggcaccgg ccaacgccgc cgactgtcat atgcacatct
      181 acgacccgcg ctttcccgaa cccaaccccc ggccgggacg caaccctcag aacgcgaccg
      241 tgtcggacta ccggctcctg cagaagcgca caggcacgac gcgcgtcgtc gtcgtgcagc
      301 cgcgcaacta tgcaaccgac aaccgggtca cgatcgatgc gctcaggcaa ctgggcgcga
      361 gtgcgagagg tgtagcggtg gtgcacccga ccgtcaccga tgcggagctc aagagcttga
      421 atgacgccag cattcgcggc atccgctttt cccttggcgg caccaacgcg gtggtgaatt
      481 gggacatggt cgagccgcta tcgaggcggg tgaacgaatt tggctggcat gtgcagttca
      541 acgtcgacgg cgacgacatc gtcgcccacg ccgacctgtt gcggcggctg ccctcacaaa
      601 ccgtgttcga tcatcttggc cacccgacac tgccggccgg caccggccat ccgtctcacg
      661 cggtccttcg cggccttctc gacaagggcc ggacctggat caagctgtcc ggcgcctatt
      721 ccaatagcaa ggtcgggccg ccggactacc cggaagcggc gaggatcgcg gaggccttcg
      781 tcaaggcggc accggagcga ctggtgtggg gcagcgactg gcctcatcca tccgagcaaa
      841 acggaacgct gccggacgac ggactgctgt tcgatctgct ggccgtgtgg gcgccggatg
      901 aggcaacgcg caagcgaatc ctggtggata atccggagaa cctgtacggc ttcgccaaaa
      961 ctggatagtt tcggctggag gtccgctccc ttgaaaccgt gaaaccacca gcagcacgca
     1021 gcgcccgcgg ctgccgaggg gggcgcgcgt cggccatgac gctagtgaaa ggttcgcgga
     1081 aacatgagcg gacagcgcgt gccatctggg gccaccagcc gacctcaagc acgttggcag
     1141 tcaaacctaa aacgcactgc tcatagaaag cgcttggatt caagtcggtt agatcggcaa
     1201 cgactagttc ggcattgatg acatcgctta tcatccgatc tccgatcatc ccgggatcgg
     1261 aatcctcgtc ggggcgtttc acgcggtagc cgaattcctc tgcggccagg acgtttacga
     1321 tccgaattga tcgaaggtga gtagctccat gccccctgcc atgacctaaa aatcttctat
     1381 ccatccgagc tttcttgggc cttcgataac cgttctggtt cttcttgttg atcttgaatg
     1441 actcctgggg tttcgtccaa cctagcttgt gcacaaccgc cacaagttgg gtcatgtgag
     1501 ttgggtgctg tcgagccttg gggatttcca gcactttcgc gagaaaggtc cgcggtggcc
     1561 acccgccgct cgggctcgcc catcgcgtcc gcttgactgc catccacgca agcctgaacc
     1621 ttcccatcaa tgaggcaccc aaggatttcc gcctacgagt ccctgaccgc gcccacagcc
     1681 aaggccatag cctcgtttcc aaccccgccc ccgcccgcat caccatcgtg atcgacgcgc
     1741 cacgcgcgac cgcgaaggtc ctcaatccac cgacgatcga cgtcacgccg gagccggcgc
     1801 gcaaactgat tgatgatgct gtgtgagctg gctcacgttt ttacgtggca gtgttgtgta
     1861 atgaatgagc caagggcgat tggcgaagtg gagggcaatc cgcaatgcac gattggcgga
     1921 aaccgcaacc gacacgagat gattttgtcg tgtgggctgc aatcatcttg gtgggattgg
     1981 cgttgttgtc gttggcgtcc ggggtagcgc cgttgaccga acccgggctt tccggcgcgc
     2041 cgtgacggcg ctggctggtg ggatggcgga aaaccggagc aaacgcagac taaggggctg
     2101 tttcgagcag caagagcgcc ccttgcgtct tgcacctatg cgctatgtca atcacctcga
     2161 tcaattgctc gacgcgagcg ttatcggttc atgaccagca agcccaaggc ccacgccgca
     2221 agaacatcgg cccgcattgc tgcgatctca gcttcgggcc aacaggagac gttggtgaat
     2281 agtccaatcc aaaatcgaac tcgacagctc tcgggccgat accgaagtac ccggttccgc
     2341 ttaggaagct gcggattcca ccttgtccgt catccagtgt gggcttacaa attacggcgc
     2401 ctcgaatgac ttcgggcggt taaggcggat ttgcggactg gcgcaggaca tgagactttc
     2461 gcggcgcaag ctactaggta tcgcggccgc ttcggtccca ctttttccgc atgtggtcct
     2521 agctggggat tatccggtcc ggtccgtgcg cttagtgctc gggctttctc caggcggatc
     2581 cgtggatatc gtgacgcgta tcgtcgccga agcgctgtcg gaatttttag gccagcaatt
     2641 cattgttgaa aacaagccgg gcgctgtttt tgccatcgcg tttgcgatga tctacgcccc
     2701 cacgatggac tacaactgga cactcgccac gtaccaccca attcagggaa tatggcagtt
     2761 tggtcgagcg ccgccgctcg ccgggggctc gccggccatg tattggtacg ggttcgtcat
     2821 taccgcggcc ctcggcgcac tcgttctaac cggactcgtg gcgctcgttc cggacaagct
     2881 gctagaacgc gtgccttggc ggaatcttac gtggatcgtc atcctttgct ccattgctta
     2941 tatcacgtac gtactccttc catacgcgat aaagacttaa gtgctgtcat gcgagagtag
     3001 agcgtgtcga gacttttcgg cttgccgcgg cagaccaaag atcatcaaat gactgcagcc
     3061 gcgaaatagg ccgtgaggtg cacgtcggga ggtttgcgcg gctggggcgt ggtgagcatc
     3121 gccgtcacgg caagcgccgt cggatcgccg agatctacgc ataaccgcac gccgaaacat
     3181 gtcctcaagt tgcttgatgc catccgacaa ggagagttga cagacgttgc acagttccgc
     3241 cgaacgccca aaatgctgtt cacgcgcaag gcatgcggct tcccgatgcc aaaggggcca
     3301 agcttgtggg acgttatatc tgtgcgagtc ggagaagatt gttcgtgccg caaagcccat
     3361 ccaagtgctc agcatgctgg atagtgctgc caccgaagcc ggcccgccgc tttcagcgac
     3421 ttcaccgata ccggcctcgg cgtggcgcga gaggaccgcc acgtggtcgg ctgcatcacc
     3481 ggcatatcgt tcggggaaaa catcgccctc aatcgcctcg attattgcaa ttgcgacgac
     3541 atcctggact gccgcccgac cgagcgctat tttcgcgcct acaagaccac ctcggagtgt
     3601 ggcgctatga atacgcctgt tacctccaac tcactcgcct ctattaagct caagctgccg
     3661 attcagcgcg gggcctacta tggcggcagg tggcatgagc cgaagagtgg ccgctatgcg
     3721 gagcagacta accccggcac gggcgactcg ctgggcaggg tggctgactc cggtgccgag
     3781 gacgtcgacg cggcagtagg ggcggccaag gaagcgttcg tggaatggcg gtgcgtgccg
     3841 ccgctcgagc gcgcccgcat gctcaagggg atcgcgcggg tgctgcgcga gaacgccggc
     3901 gagctcgcaa tgatcgactc cacggattgc ggcaatcccc tctccgagat gataggcgac
     3961 gccaatgtgg cggccgcaca ggtcgagttc ttcgcgggcc tcgtcacgga aatgaagggc
     4021 cattcgattc cgcaggggcc ggatcggctg aacttttcgg tgcgtgagcc actcggcgtg
     4081 gtcggccgca tcgtgccgtt caatcatccc ttcatgttca tagccggcaa ggccgcggcc
     4141 ccgcttgccg ccgggaatac catcgtcatg aagccgcccg agcaagcgcc gttgtcgtcg
     4201 ctgcgtctcg ccgaattgat cgacggtttg ctgccccccg gtgtgttcaa cttggtgccc
     4261 ggcggcaagg aggcgggtgc ggcgttagcg acgcatccaa gtgtcgccaa gatcgcgttg
     4321 atcggcagcg tccccaccgg aaaggcggtg atgcgtgccg ctgcagatac gctaaagggg
     4381 gtgctgctgg agctaggcgg caagaatgcc ctgatcgcct acccagacgc cgatcccgat
     4441 gcggttgcgg ccggcgtagt cggcggcatg aacttcacct ggtgcggcca atcatgcggc
     4501 tcgaccagcc gcgccttcat ccacgaagaa atccatgacg atgtgatcga gcgcataaag
     4561 gttcggatcg ggcgctggaa acccggcatc ccgaccgatc cggcgaccac catgggcgca
     4621 atcatctcca aggcgcaatt cgatcgcgtg atggggtaca ttgattctgc caagagcgag
     4681 ggggcccgac tggtcaccgg gggcggtcgg ccaaacgatc cggccctcgc gaacgggctc
     4741 tacatcgagc cgaccgtgtt cgccgaagtg aagtccacca tgaagatcgc gcgcgaggaa
     4801 atctttggac ccgttgtcgg cgtgtttagg tggagcgacg aagccacgat gttagcggag
     4861 gtcaacgcag ttgagtatgg cctgacggcc tcgatctgga ctaacgacct tggcacagcg
     4921 catcgtgccg cagcgaacgt cgaagcgggt ttcatatgga tcaatgatgt cagtaaacat
     4981 ttcctcggca ccccgttcgg cggctacaag cagtccggca tcggccggga ggagtgtctg
     5041 gacgagttgc tctccttcac gcaggagaag aacatcaaca taaacttagg agcacgccac
     5101 aaaggctgac ctgacatcga aacgacgcaa cggcgacgcg atttcatctg atcttgggag
     5161 aggaaaatga tcgaactttc cgctacgctt cggcgttgcg ctttcgtcgg cgcggcgctc
     5221 gtttgcgcta tgggcgccca ctgcgcaggt atccaacgcg tatcggcgca aagcgctcct
     5281 gactatgctg ccctcatggc ggcgcccgac cgcagcgacg ccgatcgcca agcagataag
     5341 cgccgcgatc cagtaccgtt tctcgctttc gctggtctgc ggccaggcat gaaggtgctc
     5401 gatatgggag ctggcgccgg ctacagcacc gagctcgttg ctcgcgtcgt tggtcctgcc
     5461 ggcgcagtct acggtcagaa ccctccggat aatttcgagc gtgcaagaaa tgcgttcgct
     5521 gcgcgagccg ccaccccagc gatgaaaaac actatggctc tcgtgagacc ctacgatgat
     5581 ccgttgccgg cagacgtgca cgacctcgac atgatcactt atttgttctt ctaccacgac
     5641 acgacctacc tggatgtcga tcgcgcccag atgaatcgga agttatttgc agcgctcaag
     5701 cccggtggca tgatggtgat tgccgaccat tcggccaagg ccgggtcgga tccgtcggtc
     5761 ggcaagacgc tccaccgcat tgacgagagc atgttgcgcc aagaggtgga aacagccgga
     5821 ttcaggttca tcgctgaggg aaatttctgg cgcaacccag aagacacgcg cgatttttcg
     5881 acacagcggc cttccggtcc ggtggacaac ttcgtgctca aattcgagaa gccacggtga
     5941 ccgtcgattg aaccagcgtg tggcgccgga tgtgtagttg gtaggaacga acccacccat
     6001 ttcatgccgc tgtcctgatt tcgcttcgct cgtccgggct acgttctttc atctttcacc
     6061 gcatggtgca gctcggcatc tatcctgaag atttggccgg agacggcaaa gaagacggcg
     6121 ccgatcgcag tgagagatga tgctgcgagg cgcgatgggc ttcgcaagag gtcagcccac
     6181 cccacgggct cccgcatgca tccgaactgc cattctcatg gcctcacgcc attggacctc
     6241 tgagctctga ttggttgcgt gtcacttcgc ttcgagaatt gaaaactcag tggctccggc
     6301 cgccgcgtac cggggtgaga tgtccaagct gccacgggat ggcgcaaacg acaacgcgtc
     6361 gaactcgacg tgaaagaagt tcgcctgatg aggaagggaa ctcctgtcgg tgaacgaccg
     6421 atatcgtatc ctaggatttg ggttatccag tattggattg aagcggtcgt tgctcaaaaa
     6481 tgtatttggg gtgggattcg ggctgtagat gatcgcggct gaattcatgg gccggtctgt
     6541 acatcgcgga cgtccacgac tggcatgaca ttaatggagc tccgggcacg gtcgtcgtgc
     6601 gtgggaacag cggttggaaa atgcagcgat cctccacgcc gaaacccgcg cgtcgtctcg
     6661 ttgacctcta agatcaggcc gcgcaacgtt tcgcagcgat gatgcaggcg atcgcgggcg
     6721 cgcgtcgtgg cggactggtc gcccgatcag tagggcttcc gatcgcgaac atccgcatgt
     6781 ggaccgaccc tgccgaattg ggcattgcag caaaatcggc aggacccaaa cacgg
//
LOCUS       DATILV010000879         2065 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2011032, whole genome shotgun sequence.
ACCESSION   DATILV010000879 DATILV010000000
VERSION     DATILV010000879.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2065
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2011032"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..292)
                     /locus_tag="VLJ17_21305"
     CDS             complement(<1..292)
                     /locus_tag="VLJ17_21305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020048260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HSV25550.1"
                     /translation="MAHHHHDNDHGHSDHAAHAEHGHSHGVVDPSIATTTEGLWALKW
                     SFVVLMATALLQAAIVFVSGSVGLLADTIHNFGDAATAIPLGIAFLFARKQPN"
     gene            593..1303
                     /locus_tag="VLJ17_21310"
     CDS             593..1303
                     /locus_tag="VLJ17_21310"
                     /inference="COORDINATES: protein motif:HMM:NF045135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25551.1"
                     /translation="MHGSRPDLYQLRQLILAAVVSAAAIAIVAGIIFCPEADSFSQSA
                     ATVIAIAKMEVGKPPAGFKFGRTGQGGPSQWTVVDDPTSSTGRVIEQSSTDRTDYRFP
                     LAILEPVVAKNVEISLSFKPVGGRVDQAGGIAVRVADADNYYVVRANALEDNVRFYRV
                     VKGRREQLEGVNIKVTGNQWHTLGLKAQADRFTIEFDGKTLFNTSDKTFAEAGKIALW
                     TKSDSVTRFDQIAIHVLP"
     gene            1358..>2065
                     /locus_tag="VLJ17_21315"
     CDS             1358..>2065
                     /locus_tag="VLJ17_21315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1259 domain-containing protein"
                     /protein_id="HSV25552.1"
                     /translation="MRSLLPPLLAVGVVISGSVSAQEIDWQKVDAALGRKPAITSDVH
                     RYGFPRTDLSVTLDGVAIKPALALGGWVAFKPAHEGAMVMGDLVLLESEINPVMAKLI
                     EGGVEITAVHNHLLRANPATFYMHVGGHGDPVKMANVIHDALAASKTPLSPPAAAASP
                     PAIDLDTARLDEVVGVKGQANGGVYQFGVPRRNPVSENGMALGPAGPLGLATGINFQP
                     TGNGKAAITGDFVLTGDE"
BASE COUNT          471 a          571 c          591 g          432 t
ORIGIN      
        1 tgttgggctg tttgcgcgca aacagaaagg caatacctaa gggaatagct gtcgccgcat
       61 cgccaaaatt atgaatggta tctgcaagta agccgacgct gccagatacg aaaacgatag
      121 cagcctgcaa cagcgctgtc gccataagca ctacaaacga ccatttaagc gcccacagtc
      181 cttcggtggt tgtggcgatc gacgggtcga caacgccatg actatggccg tgctcggcat
      241 gtgcggcatg atccgaatgg ccgtgatcgt tgtcgtggtg atggtgcgcc atgacacatc
      301 cttcttagac ttctggcagt ggtcagcagt tttgacccaa acccattttt gatcgtaacc
      361 acacaaaccg agttccagca cgagcatcgt ggaagttcca gatagattca aatcgcgatg
      421 gtatttgaaa acataaacac gcgataaaaa tcgatgagag ctaatccttt tgaacttgcg
      481 cttgcgaaaa ccctaactta ccctgcctgt ctacggggaa acgcaggctc cccgccagac
      541 ggccgatacc gtccaagctc tgcgcaacac tcgttttccg aggtgattgc gcatgcacgg
      601 aagcaggccg gacttatatc aactcagaca gctgatctta gccgccgtgg tgagcgccgc
      661 ggctatcgcg attgtcgcgg ggatcatttt ctgtccggaa gcggacagtt tttcgcaatc
      721 ggccgcaacg gtcatcgcga ttgccaaaat ggaagtcggc aaacctccgg ccggctttaa
      781 attcgggcga acaggccagg gcggcccaag tcagtggacc gtcgtcgacg atccgacgtc
      841 gtcgaccggc cgcgtgattg aacagtcaag tacggatcgg accgactatc gctttccgct
      901 tgctatcctc gaaccggtcg tcgcgaaaaa cgtcgagatt tccttgagct ttaagccggt
      961 tggcggccgc gtcgaccagg ccggtggaat tgccgtgcgc gttgccgacg ccgacaacta
     1021 ctacgtcgtc cgcgcgaacg cactggaaga caacgttcgc ttctaccggg tcgttaaggg
     1081 acgtcgggag caacttgagg gagtgaacat caaagtaacg ggcaatcagt ggcacacgct
     1141 cgggctcaaa gcgcaggctg accggttcac gatcgaattc gacggcaaaa cgttattcaa
     1201 cacgtcggac aagacctttg ccgaagcagg aaaaatcgca ctctggacaa aatccgacag
     1261 tgtcacgcgt ttcgatcaaa tcgcgataca cgttttgccg taatgttaga gggactctgg
     1321 aattacgggg ggtttaaccg gaccaaggag acttgatatg cgttcattac tcccgccttt
     1381 gttagcggtc ggtgtcgtca tctcggggtc ggtatccgca caggagatcg attggcaaaa
     1441 ggtggatgct gcacttggcc gaaagccagc gataacgagc gatgttcatc gctacggttt
     1501 tccgcgcaca gatctttcgg tcacgcttga cggcgtcgcc atcaaaccgg ccctggccct
     1561 tggcggatgg gtcgcattca agccggcgca tgaaggtgcg atggtgatgg gcgaccttgt
     1621 cctcctcgaa tccgagatca atcccgtgat ggcgaagctg atcgagggcg gggtcgagat
     1681 tacggctgtg cacaaccatc tgctgcgcgc caatccggcg actttctata tgcacgtggg
     1741 cgggcatggc gatccggtca agatggccaa cgtcattcac gacgcgctag ccgcaagcaa
     1801 gacaccgttg tctccgccgg ccgcagccgc ttctccacca gccattgatc tcgatacggc
     1861 gcgcctcgat gaagtcgttg gagttaaggg tcaagcgaac ggtggcgttt atcaatttgg
     1921 tgtgccgcgc cgcaatccgg tatcggaaaa cggaatggcg ctaggccccg ccggtccact
     1981 gggcctggct acggggatca atttccagcc aactggcaac ggaaaggctg ccatcaccgg
     2041 cgattttgtc cttacgggtg acgag
//
LOCUS       DATILV010000880         3937 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4057555, whole genome shotgun sequence.
ACCESSION   DATILV010000880 DATILV010000000
VERSION     DATILV010000880.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3937)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3937)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3937
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4057555"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..345
                     /locus_tag="VLJ17_21320"
     CDS             <1..345
                     /locus_tag="VLJ17_21320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25553.1"
                     /translation="LPNLTHFLVSNRVYGATANARLPNLERNDYAATARSMGLDRIFE
                     FGSIEELERDFAALRSANLQGHTFVVLEVEPFSDAEQKLEQPPFDGPELKYRFGRHLE
                     RRTGCNIFGYRI"
     gene            2213..3199
                     /locus_tag="VLJ17_21325"
     CDS             2213..3199
                     /locus_tag="VLJ17_21325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012045012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HSV25554.1"
                     /translation="MKQLATTSLLVALAVAVAQPADAADPLSKDMPARIEAIPIQTLT
                     LSDEQFLKGDAYGRPTTIAGVLRVAQGSGRLPLVVLVPGSGGINASADVWDRQFESMG
                     ISTFMMDSFAGRGIVNTVVDQSQLGRLNMILDLYRSLTALAAHPRVDPNRIAVMGFSR
                     GGQATLYASLKRFHKMWNPSGVDPAVYIALYPPCITTYIGDTDVSDHPIRMFHGTSDD
                     YVEIGPCRGYFARLKATARDVQMTEYPDTWHAYDLPLLPSTPTVAQNAQTTHCVLKEE
                     PIGTIMNSATQKQFSNTDECVGRNPHVAYSASSTHATEDAVKMLLKTVFKLN"
BASE COUNT          790 a         1175 c         1136 g          836 t
ORIGIN      
        1 ctgcccaatc tcactcattt cctggtctcc aatcgtgtgt acggcgctac ggcgaacgcc
       61 cgtttgccga acctcgaaag gaacgactat gcggcgactg cacgttcgat ggggctcgat
      121 cgtatttttg agttcggcag catcgaggag ctagagcgcg atttcgcggc cctgcgttca
      181 gcaaatctgc agggccacac atttgtggtg ctcgaagtag agccattttc cgatgccgaa
      241 caaaaacttg aacagccccc gttcgacggt ccggagctga aatatcggtt tggtcgccac
      301 ctcgaaagac ggaccggctg caacatcttc ggctacagga tctgaacgcg agccagctgc
      361 caaccgcagc acggcctaaa aaatacgatt cgagcacgat cttgcggaat tcgggcagcc
      421 gcggaccggc tgccgtcatt agctgaccga caagccgctg cagttctcgc ccctccatgt
      481 attcaatctc tcggttggtt ttggctccct ctgctttcaa agcggggtcg gcgagaacct
      541 ccgcgaaggc gttccgcagg aaatcgaccc catcggccgg aacgttgggg gcggcaacca
      601 tggcgcgttg cgcctctccg atccgttggc gtagcttgac gatccaggtc ttgtcgtcag
      661 gcagcgcgac cgcttcgctc aaggttggca cgtcgggcaa atgatgccat cgaccagcgc
      721 tgaagatcgc gattggcttg attgagttgt tccttatttg cggcagtccg gtgtcagcgg
      781 aaaggatccc tgcgtcaact tcgttgcgca ggacggcaag ccacatgtcg cccgcgccgc
      841 gatagccgac cacgattttt gacttcagcg cctgcacata cgaaacgatc gctgcgatga
      901 cgctgatgtt gtctgctggg cctgtcgacg accaggtgag gagggcggcg tttgcggcgt
      961 ccttaatggt tgggtaacgg gcgtggggtc ccacgtacca taatttgggc gacatcgatg
     1021 tctttgccag ccaattcagt ttggtgacgt cccaagtgac gcccggtcgc gcgagcatct
     1081 ggctcagaat cgcggcctct gcactcgcat gcatgatggt gagcccatcg gcgggcctaa
     1141 ccatcaaggt tgcgagtgcc gcaaggccgc cttggccgtc cctgttctcc accacgacgg
     1201 ttgcgccgat tctggcggcc agataaggcc gcatcaagcg ggcatagaga tcatagccgc
     1261 cgccgggcgg agagccgacc aaaattcgaa gggttctgcc tcgatagaaa tcagccacgt
     1321 tcgaagaggc ggcaatggcc gcgcgtctgt gagcaatgcg ccagagatgc ccgctgaaaa
     1381 gctgcgccgt tggagcattt ttccccgaac gcgatcgcaa actctttcca atattcggcc
     1441 ttcaactgtt ctaccgcgac taccatcgaa tggcgtcctc gctgatcgct ggtcgtgcga
     1501 taccttgcgt aatggtgact gtaatccgag caaggcggca agcagcccac atcttcgtca
     1561 gcggctgacg actttgcaat cggttgacgc gcccgtccgc gctccagcgg atggccatac
     1621 gcttctcttg atcaccaata tcaagatcaa cacgacgctc ttcgaaaagc tcagtttcga
     1681 tttccgtcgg tgataccgcc agatcgcagg ggttgcgctc acaccggcgt ggtagatccc
     1741 tccttcccgg ccaaaaccat tctcaagttc atcgctatgc gaaggccaat cctcgtcggg
     1801 tcgccatggt gacgcagggc agcgatacct ccagtccgaa cccttgcgtc gtcgatggcc
     1861 ttcatcaagg ccggcaaggt tcgcgctctg gcggttacga cggcagcgcg ctttgtcgaa
     1921 aaaccacatt tccgagacat cggtctaccc tgacttgaga gcgcgcatca cgacctgccg
     1981 tgaggcaagg tgggccggga tcgcacgtcc atatacttcc gttcaggcca atcgcgccgc
     2041 tcgcgttacc gtagcggagc agtcgagaag gatcacggtt cggcagtctc gacatcccgg
     2101 cctttcgtac cgatcgacaa ttcgtgtatc gtaacttcac gcgcgccgcg ttgtgaaaat
     2161 ccaggaattc cgcgcgcgga ggtatccgcg gtttgtatgt tggaggagag caatgaagca
     2221 gcttgcgacg accagtttgc ttgtggcgct tgcagtcgcc gttgcgcagc cggctgacgc
     2281 ggcggacccg ctatcgaagg acatgccggc ccggatcgag gccattccaa ttcagactct
     2341 aactctttcg gacgagcagt ttctcaaggg ggacgcctat ggacggccca caacgatcgc
     2401 cggcgtcttg cgggtcgcac agggctccgg gcgcctgccg ttggttgtcc tcgtgccggg
     2461 gtcgggcggc atcaatgcaa gtgccgatgt atgggatagg cagtttgaat cgatggggat
     2521 atccacgttt atgatggatt cctttgctgg acggggaatc gtgaataccg ttgttgatca
     2581 gtcacagctc ggacgactga acatgattct cgacttatat cgaagtctca ctgcactggc
     2641 cgcgcatccg cgtgtcgatc cgaaccggat tgccgttatg ggcttttcgc gaggcgggca
     2701 agcgacgctt tacgcgtcgt tgaaacgctt ccataagatg tggaatccta gcggggtcga
     2761 cccggcggtc tatatcgcac tctatccgcc ttgcatcacg acttacatcg gcgataccga
     2821 tgtcagcgac catccgatcc gcatgttcca tggaacatcg gacgactatg tcgaaatcgg
     2881 accgtgtcgc ggctatttcg cgcgccttaa agcgactgct agggatgttc aaatgactga
     2941 gtaccccgac acatggcacg cgtatgatct tcccctattg ccctcgaccc ccacggtcgc
     3001 tcagaatgcg cagacgacgc attgcgtgct gaaagaagag ccgatcggca cgatcatgaa
     3061 ttcagcgacg caaaagcagt ttagcaatac ggacgagtgc gtcggacgaa acccgcacgt
     3121 tgcctattcc gcaagttcga cccacgcgac cgaagacgca gtcaaaatgc tgctcaaaac
     3181 ggtgttcaag ttgaactgat cattcgccgc ttatctcgca ataattcacg aagacgaggt
     3241 ggctgggtag cgccaattcg gatgagcatc ggccatttcc gcatcaaggc gccctagcgg
     3301 gcgaggcgct gcgcgagaaa cgcgcgccct gcagccctcc gatctccctc ggcagggcgc
     3361 cagccaaata cgagttggtg atcaatctca agactgccct aaggcactcg gccttgacgt
     3421 tccaccatct gtattgacgt gcgctgacga aatgatcgaa tagccgaagc gaaaatcggg
     3481 ttgtcggtca gacttgcaat tcgtcaccca ccatgagtcc gctcggggtc caaaagcaga
     3541 cgggctgcag gcggcgacgc agggtggtcg tggctgctca aacgactgcc ccctcgcgtc
     3601 ctggcgctgt ccggttgcgc cctcctgctt gttgcgggaa tacgcggtct tgtcgcgtgc
     3661 aattccgccc cgcgaccaac tgcaccttgt gacgggtact ttgcaggaat tggtgctgca
     3721 gaacacgcgc gcccgcgagt tcaagatcgc gctggcatct gactgcgccc ttcagacatt
     3781 cgagttcaag aatgcgcatc gcccctgccc ggatcgccag aggcgacttg gcgcaagtcg
     3841 cttcgccctt caacacgtct cgcagtgaag tgctggcggt cctgctgatc ttgtttgggg
     3901 gccctcttgt ggtcattctg gctgaaccgg caacgct
//
LOCUS       DATILV010000881         6043 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4558889, whole genome shotgun sequence.
ACCESSION   DATILV010000881 DATILV010000000
VERSION     DATILV010000881.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6043
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4558889"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            261..2075
                     /locus_tag="VLJ17_21330"
     CDS             261..2075
                     /locus_tag="VLJ17_21330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25555.1"
                     /translation="MMASTSIGLEAPRSARTQTRGWTIDGEIVAGAACLAFTLIVGIT
                     TAGDYGITIDEFNTDDYGPKALAWYTSGFTDRSNFETVEAPLWYYGPWFQMLTALVQS
                     LRIADPVTVRHTMTFLVGLAGLAALLPIARFSVGRWAGPAALVLCLTTGYLYGSLFFT
                     PIDVPFLAAMCWATLAIMQMARQVVPGWTATIFAGFATGLAIATRTGGVITHFFLIGT
                     MFLSSLEALVVCGRRAGPQLLAIAVRVTAAIAISWAAAIALWPWLQIGNPFAQFKIAL
                     VHFATLALDFEFDHWGEKLWTNALPWSYIPEQWLARLPSAFLGLLVLATLFACAKVLW
                     LGRVSLKRFREQGVPGLRRPALAVARSRRILLVWMAVVAPVGFIVFQHSTVYDGVRHT
                     LFVIPMLALLAGWGLTRLQPYLQRFGVLAGATAGVSLVVAISNLVTLHPLEYIATNAL
                     AGGTTGSYGRFELDYWGAAVTEALRRLEDRLDAAGAFVQDSPSLLICVPYREQMVKPM
                     LHKNWRLELDPKKADFVIESQRSRCAAQVGRLILVDEVKRHERTFAWTYGNKSGPFTA
                     AARPRPAPQQPDPTRVMIRVSPSTESASPPARSHERES"
     gene            complement(2343..3113)
                     /locus_tag="VLJ17_21335"
     CDS             complement(2343..3113)
                     /locus_tag="VLJ17_21335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSV25556.1"
                     /translation="MADGETFLACPALCTWPFGHTWQVGISSMERNLSSQVWVVIAAY
                     NEASVIHRVISDVACRGYSVIVVDDGSSDHTAAAAFAADRVICHPINLGQGAALQTGM
                     DYALEQGAKVIVTFDADGQHRAADIARLVRALEKAQADFALGSRFLGGPIDLPRSRLW
                     LLKAATLFTQLSTGLRLSDTHNGLRAMTCRGAGAIRLRQNRMAHASEILSQIATSGLK
                     YVEVPVNIEYNIYSLAKGQRLGDALMILLDLFARRLYR"
     gene            complement(3106..3477)
                     /locus_tag="VLJ17_21340"
     CDS             complement(3106..3477)
                     /locus_tag="VLJ17_21340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HSV25557.1"
                     /translation="MNSERLTFLQIVLLAAYGAGMAGGQLLFKMAAQRFALSGTAGDH
                     LIQLTGNIYFFAAFALYCGLAVLWIWILTFTPLSRAYPFVAIAFAITPLLGVWMFGEP
                     LSLRLGLGIATIAFGILLVVG"
     gene            complement(3474..4376)
                     /locus_tag="VLJ17_21345"
     CDS             complement(3474..4376)
                     /locus_tag="VLJ17_21345"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSV25558.1"
                     /translation="MQPRAGTGPIRVLENSKRTSVLRFCAACRQITEHKWLYSVKDCD
                     ILRCRSCGLGRADVQGFDPVSYYTSEYFSGRRSDGYADYSSAESVLRREFARTVRFIR
                     GRRDGGRLVEVGCAYGYFLQEANAYFEVFGIELAADAAIHCRQSGLQVFTGTADEATL
                     QRIGSADVFVLLDVIEHLPDPHQTLRLLTRYLNPGGIIVITTGDFGSPSARLFGRSWR
                     LMTPPQHLWFFSSDSLRKIASSLGLRLEHVDHPWKIVPLSLMIFQLRRMLRLRVQPPS
                     GEADLGLPINLFDAMRLVLRKPPS"
     gene            complement(4398..5030)
                     /locus_tag="VLJ17_21350"
     CDS             complement(4398..5030)
                     /locus_tag="VLJ17_21350"
                     /inference="COORDINATES: protein motif:HMM:NF017088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HSV25559.1"
                     /translation="MLKTLLVAAAASALITSSAIAQPQTSQGPAAQGTNSPASEGPAA
                     QGTNSPASQGPAAQAQGTNSPASAKFIAAQPADQWVFTKFKGIDVLGPDNANVGSVND
                     LLFDKAGKISGVVVGVGGILGIGAKNVAIDMSAFDVVPAGSGGNDGSNAPSSAAHDPS
                     DVKLKVAWTKDQLKAAPDFQYYKPPAGMATTSSPSTTGAAPPANSRPRPQ"
     gene            complement(5251..5856)
                     /locus_tag="VLJ17_21355"
     CDS             complement(5251..5856)
                     /locus_tag="VLJ17_21355"
                     /inference="COORDINATES: protein motif:HMM:NF013117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HSV25560.1"
                     /translation="MNDLAVWLDRHNVSAVALLATIGLLVVAFVVSYLLKRPLQDSLR
                     HLASRLRLPYETVLIITRLFIGALWVVIAMLVLEVWGISVGGLWTLLVSAATIVGVGF
                     LATWTMVSNITASFFIALWRPFHLGDHIEILPENLMGRMIDSNLMFVVLRENNGAIIQ
                     IPNNLFFQKMFRVSGSGNKSLFEEYELDAGRARGAPQEVIR"
     gene            complement(5914..>6043)
                     /locus_tag="VLJ17_21360"
     CDS             complement(5914..>6043)
                     /locus_tag="VLJ17_21360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV25561.1"
                     /translation="GERPEPAFLVSKPYQKSMISALVSQALFFERNAVRRERRATG"
BASE COUNT         1277 a         1755 c         1768 g         1243 t
ORIGIN      
        1 gggcaggcgt gaggagcggt agctgatcaa catttttggc accgtaacag gggtaccgcg
       61 ttgtccaaac ggcgcggtac tcaccgaatg ctctttcagt ccctccaatc taagaatttg
      121 ccacccagta gtcttgagac acccaccgac accataccct cctgatacgc ggcgaacaga
      181 ggcgacgagc acgtggctgt cgtctgcacc tttgtgtttg gatctgttgc tggctcaccg
      241 gcagaaattt gtgacgggaa atgatggcaa gcacaagcat aggccttgag gcgccgcgca
      301 gcgcccgcac tcaaacacgt ggttggacga tcgatggcga aatcgtagct ggtgcggctt
      361 gccttgcgtt cacgctgatt gtcgggatca caactgccgg agactacggt atcacgatcg
      421 acgaatttaa caccgacgac tacggtccta aggctctcgc ttggtatacg agtggcttca
      481 ctgatcgatc aaatttcgaa accgtcgagg cgccgctttg gtactatggc ccctggttcc
      541 aaatgctcac ggcgctcgtg cagtcgctcc ggattgccga tccagtgaca gtccgccaca
      601 ccatgacgtt cctggtgggg ctcgccgggc tcgccgcgct gctaccgatc gcacgctttt
      661 ccgttggccg ttgggcggga ccggccgcac tcgtgctgtg cctgaccacc ggctatctct
      721 acggcagcct cttcttcacg ccgatcgacg ttccgtttct ggctgcgatg tgctgggcga
      781 cacttgccat catgcagatg gcgcgccaag tcgtgccggg ttggactgca accattttcg
      841 ccggttttgc gaccggcctt gcaatcgcca cacgcaccgg tggagtcatt acccacttct
      901 ttttgatcgg cacgatgttc ttgtccagcc ttgaagcgtt ggtcgtgtgc ggacggcgcg
      961 cgggcccgca gcttctagcg atcgcggttc gcgtcacggc ggcgattgcg atcagctggg
     1021 cggccgccat tgcgttatgg ccttggctgc aaatcggcaa tccgttcgcc caattcaaaa
     1081 ttgcccttgt gcacttcgca acattagcgc tcgattttga attcgatcat tggggcgaga
     1141 agctttggac gaacgcactg ccatggtcct acattccgga gcagtggctc gcccgactgc
     1201 cgtcagcctt cctgggcctc ctcgtactgg ccacgctctt cgcctgtgcc aaggtcttat
     1261 ggctcggacg cgtgagcctc aaacgtttca gagagcaggg tgtgccgggg cttcgtcgcc
     1321 ctgcgctggc ggtggcccgc agccgtcgta tcctgctggt gtggatggcg gtggttgctc
     1381 ccgtcgggtt catcgtgttc cagcattcga ccgtctatga cggcgtgcgc cataccctgt
     1441 tcgttattcc aatgctcgct ttgctcgcag gttggggtct gacacggctg cagccttatc
     1501 tgcaacgctt tggcgtccta gcgggagcga ctgcgggggt aagcctcgtt gttgccatct
     1561 ccaatttggt gaccctgcat ccgctcgaat atattgcgac caatgcactt gccggcggca
     1621 cgacgggttc ctatgggcgc ttcgaacttg actattgggg cgccgctgtg acggaagcgt
     1681 tgcggcggct tgaggaccgt ctggatgcgg ccggtgcatt cgtccaagac tcgccaagcc
     1741 tcctcatctg cgttccttat cgggagcaga tggtgaagcc gatgctccat aaaaattggc
     1801 gtttagaatt agaccccaag aaggccgatt tcgttattga gagccagcgt tcacgttgtg
     1861 ccgctcaggt tgggagattg atacttgtcg atgaggtgaa gcgccacgag cgcacgtttg
     1921 cctggaccta tggaaataag agtggtccct ttacggcagc cgctcgcccc cgccctgcgc
     1981 cgcagcagcc ggatccaaca cgcgtgatga ttcgggtttc tccatcgacc gagagcgcaa
     2041 gtccgccagc gcggtcgcac gagcgagaat cgtgatgagt tccatctgcg tgcgcagttt
     2101 caggtgcagg ttcaaaagca cgatcagatt gatacacacc cagatgtaga gaacgagatc
     2161 aactcctcgg ccaacgccga ccaatgaggc gacgcgggtg gcgtgatcgg gcacccaggt
     2221 aaaatagaag cctgccatgg ccgcgattat cgaaagcgct gccacaacgg gcgaacgacg
     2281 tcgttcattg ccggcataga tcgcaactgc aatcagcaag agcgaaagga cgacctgcgc
     2341 gatcatcggt aaagtctgcg tgcgaaaagg tcgaggagga tcatcagcgc gtcgccgagt
     2401 cgctgcccct tggcgagcga gtagatgttg tattcgatgt tgacaggcac ctcgacatac
     2461 ttcagaccgc tcgtggcgat ctggctgaga atctcagatg cgtgcgccat ccggttctgc
     2521 cgcagccgga tcgcgcccgc gccgcggcag gtcatggcgc gcaagccatt gtgcgtatcg
     2581 gaaaggcgca gtcccgtgga cagctgcgtg aacagagtgg ccgctttcaa cagccacagc
     2641 cgtgagcgtg gcaaatcgat cgggccgcca agaaagcgac tccccagcgc gaagtcggct
     2701 tgcgcttttt ccaacgcgcg cactaggcgg gcgatgtcgg cagccctgtg ctggccgtcg
     2761 gcgtcgaacg ttacgatgac tttggcacct tgttccaggg catagtccat gcccgtctgt
     2821 aaggcggcgc cttggccaag gttgatcgga tggcagatga cgcggtctgc cgcgaaggcg
     2881 gccgcagcgg tgtggtccga tgatccgtca tcgactacga tcacgctgta tccgcggcac
     2941 gctacgtcgc tgatcacgcg atgaatgacc gaggcctcgt tataggcggc aattacgacc
     3001 catacctgcg agcttaaatt gcgttccatc gatgatatgc cgacctgcca tgtgtggcca
     3061 aaaggccatg tacataacgc gggacaggcg agaaaggttt cgccgtcagc caacgacgag
     3121 caagattccg aaggcgattg tcgcgatgcc caaacccagt cgcaaactga gcggctcgcc
     3181 aaacatccac acaccaagca acggcgtgat tgcgaatgcg atcgcaacga aagggtaggc
     3241 gcgcgacagg ggcgtgaacg tgagaatcca aatccacaaa acggcgagtc cacaatacag
     3301 ggcaaacgcc gcgaaaaaat aaatgtttcc cgtcagttga atcaagtggt ctcccgcggt
     3361 gccacttaaa gcaaatcgct gcgccgccat cttgaacaga agctgtccgc cagccatgcc
     3421 ggccccatag gcggccagca acacgatctg caaaaaggtg agacgttcgc tgttcaagac
     3481 ggcggctttc gcaggacgag gcgcatcgca tcaaatagat tgatcggcag tccaaggtcc
     3541 gcctctccgg atggaggttg tacgcgaagc cgcagcatgc ggcgaagctg aaagatcatc
     3601 agcgagagcg gtacaatttt ccacgggtga tcgacatgct caagcctcag tccgagcgaa
     3661 cttgcgattt tccggaggct gtcactgcta aagaaccaga gatgttgcgg cggcgtcatt
     3721 agcctccaac ttctgccgaa gagacgcgcg gagggtgagc cgaagtcgcc agtggtaatt
     3781 acgatgatgc cgcctggatt gaggtagcgg gtcaataggc gtagcgtttg atgcgggtca
     3841 ggcaggtgct caatgacgtc gagcaggaca aagacatccg cacttccgat tcgttgcaac
     3901 gtggcctcgt cggccgttcc tgtaaagacc tgcaaaccgg actgacgaca atgaatcgcg
     3961 gcgtcggccg ccaactcaat cccgaatact tcaaaatatg cgttagcctc ttgaaggaaa
     4021 tagccataag cgcaccccac ctcgaccagg cgtccgccat cgcgccgccc gcgaatgaac
     4081 ctcacggttc gcgcaaactc gcggcgcaac actgattcag cgctggagta atccgcatag
     4141 ccgtccgagc gtcgccccga gaaatactcg ctggtgtagt acgataccgg atcgaacccc
     4201 tggacgtccg cccgcccgag cccacaactg cggcaccgca gaatgtcgca gtctttaacc
     4261 gagtagagcc atttgtgttc agtgatctga cggcaggcag cgcaaaagcg cagcaccgaa
     4321 gtccgtttcg agttctcaag aacacggatc ggaccggtgc ccgcgcgtgg ttgcacttcg
     4381 ggagaggcgc tcaagtttta ttggggccgc ggacgcgaat tcgccggtgg cgccgcgccg
     4441 gtcgttgagg gcgaagatgt cgtggccatg cccgccggcg gcttataata ttgaaaatcc
     4501 ggcgcggcct taagttgatc ctttgtccac gccaccttca acttcacgtc gctggggtcg
     4561 tgggcggcgg aggagggagc attgctgccg tcgttgccgc cggagccggc agggacaaca
     4621 tcgaacgcgc tcatgtcgat cgctacgttc ttcgcaccga tcccgaggat tccgccgaca
     4681 cctacgacaa cgccggagat ctttccggcc ttgtcaaaca gcaaatcgtt gacgctgccg
     4741 acgttggcat tatcgggacc gagcacgtcg atgcctttga atttagtaaa tacccactgg
     4801 tccgccggtt gcgcagctat gaacttggca ctggcgggcg aattcgttcc ctgtgcctga
     4861 gccgctggtc cttgtgaggc gggcgaattc gttccctgag ccgctggtcc ttctgaggcg
     4921 ggcgaattcg ttccttgagc cgctggtcct tgcgatgtct gcggctgagc aatcgcgctt
     4981 gaggtgatca aggcgcttgc ggccgctgcg acgagaagag tcttgagcat ttctggactc
     5041 catatctcta agtgacggat ctccaagtga tggatcatcc aggtcagcca tcggcagtca
     5101 tagcgcgagc acgatgacaa ggcctggttg ggagaacaat tcacaacgcc gctgatagtt
     5161 cctacggttt ctccttggac tggcaggggc ccgcaaatac cagcgatctc aaacagaacg
     5221 gaacttctct tcaagagcac gttcgaggcg ttaacggatg acttcctgtg gggcgccccg
     5281 agcacgaccg gcatccagtt cgtattcctc aaacagcgac ttgttgccgc taccactcac
     5341 tctaaacatc ttttgaaaaa acagattgtt cggaatttga ataatagcac cattgttctc
     5401 ccggaggaca acgaacatca gattgctgtc gatcatccga cccataagat tttcaggcaa
     5461 gatttcgata tggtcgccaa gatggaaagg gcgccataag gcaataaaga aacttgccgt
     5521 tatgttgctg accatcgtcc aagtggccag gaagccgact ccgacgatgg tcgcggcgct
     5581 taccagaaga gtccaaagtc cacccacgct gatgccccag acttccagca ccagcattgc
     5641 aatgacaacc cacaaagcgc cgatgaacag tcgcgtgatg atcaataccg tctcgtaggg
     5701 taggcgaagc cgggatgcaa gatggcgcag cgagtcctgc agtggtcgtt tcagcaaata
     5761 gctgaccacg aaagcgacga cgaggaggcc gatcgtggcc agcaacgcca ccgcactgac
     5821 attgtgtcga tccaaccaga cggcaaggtc attcattgga gcggcctccg gcagagcatt
     5881 gcaatgaatt aatcgcccgc cgagcgaggc cggtcaacca gttgctcgcc tctctcgccg
     5941 tactgcattg cgttcgaaga acagtgcttg gctgacgagt gcggaaatca tcgatttctg
     6001 atagggcttg gaaaccagga atgcaggctc cggacgctcg ccg
//
LOCUS       DATILV010000882         2914 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_988391, whole genome shotgun sequence.
ACCESSION   DATILV010000882 DATILV010000000
VERSION     DATILV010000882.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2914)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2914)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2914
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_988391"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1138
                     /gene="tssK"
                     /locus_tag="VLJ17_21365"
     CDS             <1..1138
                     /gene="tssK"
                     /locus_tag="VLJ17_21365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssK"
                     /protein_id="HSV25562.1"
                     /translation="VMPDGTPFDMPADSPLPPPILVPDNASQQIAWLSMPIAAANMRE
                     ADDRESESAARFMIGSETFIDSTSALRIEEEVDIAFPRMGFELRKTTKPGYISLGIAR
                     VLEVRDKQIVFDEKYVPPVLLCHAHPVVDGWIARVIGWIDNKLEELARYAADPTAGGG
                     LQSVDYFVLQLLNRHIAVLKHYRASGYLHPERLFEEFLRLVGELATFATAERRAREYP
                     AYDQDDLENVFGPVMRDLQDFLSARLGRRAIRLEIITRANNAFISTIRDRALFRNATF
                     VLEVAARRPLTEIQTQFPHLFKVGPNTKMNEIVHAHLPGVSLIHLPTPPPQIRAITDH
                     VYFFFDRKSPLWPEFSTASSIGMHFSGDWPELELELWAVLEDRR"
     gene            1135..2670
                     /gene="tssL"
                     /locus_tag="VLJ17_21370"
     CDS             1135..2670
                     /gene="tssL"
                     /locus_tag="VLJ17_21370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014493497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0033104 - type VI protein secretion
                     system complex [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system protein TssL, long
                     form"
                     /protein_id="HSV25563.1"
                     /translation="MNDKVPPRSPFGIPGDRTVIRPNPGGRRPVAPPPAPSAPAAPYN
                     PIPEGQGPPQPAVPQATPYVPPAAPGNLNPDEWISSQPQAPQPIVQARAPEVRIDELV
                     APNENPILRSAGPLLLLLGRLRVALARASFASLMEQVADAIKFFEKDIRSAGISEAQA
                     NSAKYIICATADDIVQNIPTEDRHVWTQYSMLSRFFGERVGGVRFFDELTRLKQDPLN
                     NYDLLELQHTCLALGFHGIHRTSAGGVATLQQIQRDLYETLRRLRPRVYRDLSPRWQG
                     QNLVSRMLRVWVPWWGVLGFLGLMLFGIYFVLLYWLTGDVDAATAQLATLHDTGKLSI
                     IRHLPRKEPPPPPPEPDKITQLQRICAALGPEVAADKASAEQSANQITVRVGNVILFD
                     SGSATVLDAFKAIAARVATTLDKEEGFIKIVGHTDNTPISKGNVRFPSNYHLSVERAN
                     SVAAVFRPYLAKPDRLQTDGKGETAPIADNKTPEGRAKNRRVEILIPRTDTGPVAEKT
                     CPR"
     gene            2717..>2914
                     /locus_tag="VLJ17_21375"
     CDS             2717..>2914
                     /locus_tag="VLJ17_21375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25564.1"
                     /translation="MSGISSKEILRIVLAGIGLTSVCALIYLAGPLISIGGWRPLENY
                     IVREIAILLLVAAFASVLAVNW"
BASE COUNT          565 a          979 c          818 g          552 t
ORIGIN      
        1 cgtcatgccg gacggcacac ctttcgatat gccagccgac agcccgctgc cgccaccgat
       61 attggtgccg gacaatgctt cgcagcaaat cgcatggctg tcgatgccga ttgcggccgc
      121 caacatgcgc gaagctgacg accgggaatc cgaaagcgcc gcgcgtttca tgatcggttc
      181 cgaaactttc atcgattcca cctcggcgct acgcatcgaa gaagaagttg acattgcgtt
      241 tcccaggatg ggtttcgaac ttcgcaagac cactaagccc ggatatatca gcctcggcat
      301 cgcccgcgtg ctggaagtcc gcgacaagca gatcgtattc gacgaaaaat acgtgccgcc
      361 agtactgttg tgccacgccc accccgtggt cgatggctgg atcgctcgcg tgatcggatg
      421 gatcgacaac aaactggagg aactggcacg ctatgccgcc gacccgaccg ccggcggcgg
      481 tttgcagagc gtggactatt tcgttctgca gctcttgaac cgacatattg cggtgctgaa
      541 acattatcgc gcgtccggct atctgcaccc ggagcggctg ttcgaagagt tcctgcgcct
      601 tgtcggcgag cttgcgacct ttgccacggc tgaacggcgc gcacgtgaat acccggccta
      661 cgaccaggat gacctggaga acgtgttcgg gccggtgatg cgagatctgc aggatttcct
      721 cagcgcccgg ctcggccgcc gcgcgatccg tctcgagatc atcacgcgcg ccaacaatgc
      781 tttcatttct acgatccgcg accgcgcctt gttccgcaat gccactttcg tgctcgaagt
      841 tgcagcgcgc cgaccgctca ctgagattca gacccagttc ccgcatcttt tcaaggtcgg
      901 tcccaacacg aagatgaacg agatcgtgca cgcccatctg ccgggggtgt cgctcattca
      961 tctgcccacg ccgccgccgc agatccgagc gattaccgac cacgtctatt tcttcttcga
     1021 ccgcaaatcg ccgctgtggc ccgaattctc gaccgcgagt tccattggca tgcacttctc
     1081 cggcgactgg ccggaacttg aacttgaact atgggcggta ctggaagatc ggcgatgaac
     1141 gacaaggttc caccgcgcag cccattcggc attcccggag atcggaccgt catccgtccc
     1201 aatccgggag ggcggcgccc ggtcgcgccg ccgcctgcgc ccagtgcacc ggccgctccc
     1261 tacaatccga tacctgaagg ccaagggccg ccgcagcctg cggtgcctca ggcgacgccc
     1321 tatgtaccgc cggctgctcc cggaaatctt aatcccgatg aatggatctc gtcacagcca
     1381 caggcgccgc agccgattgt ccaggcgcgc gccccggagg tcaggatcga cgaactggtt
     1441 gcgccgaatg aaaacccgat cctgcgctcg gccggcccac tcttgcttct gctcggccgc
     1501 ttgcgcgtcg cgctcgcccg cgcctcgttc gcgagcctga tggaacaggt cgccgacgcc
     1561 atcaagttct tcgagaagga catccgctcc gctggcattt ccgaagcgca ggcaaattcc
     1621 gccaagtaca tcatctgcgc caccgcagac gatatcgtcc agaacatccc gaccgaggac
     1681 cgtcacgtct ggacgcaata cagcatgctg agccgtttct tcggcgaacg tgtcggcggc
     1741 gtgcgcttct ttgacgagct gacacggctc aaacaggacc cgctgaacaa ttacgacttg
     1801 ctcgagttgc agcacacctg cctggccctc ggattccacg gaatccaccg cacctcagcg
     1861 ggcggcgtcg ccacgttgca gcagattcaa cgcgatcttt acgagacgct gcgccgattg
     1921 cgcccgcggg tctaccgcga cctctcgcca cgctggcagg gccagaacct ggtgagccgg
     1981 atgttgcggg tttgggtgcc gtggtggggt gtcctgggtt tcctcggcct tatgctgttc
     2041 ggcatttact tcgtattgct ctactggctc accggcgacg tcgacgccgc gaccgcccaa
     2101 ctggccacgc ttcacgacac cggcaagctt tcgatcatcc gccatcttcc gcgtaaggaa
     2161 ccgcccccgc cgccgcccga acctgacaag attacacaac tgcagcgaat ttgcgctgcc
     2221 ctcggacccg aggtcgccgc cgacaaggcc tcagccgaac agagcgccaa ccaaatcacc
     2281 gtccgggtcg gcaatgtcat cttgttcgat tccggctctg cgacagtgct cgacgcattc
     2341 aaggcgatcg cggcccgcgt cgcaacgacg ctcgacaagg aagagggctt catcaagatc
     2401 gtcggacaca ccgacaacac gccgatcagc aaaggcaacg tccgcttccc ctccaactat
     2461 catctctctg tcgagcgcgc caatagcgtg gcggccgtat tcaggcccta ccttgccaag
     2521 ccggatcgcc tccagaccga cggcaagggc gagaccgcgc cgatcgccga caacaaaacc
     2581 cccgaggggc gcgccaagaa ccggcgggtt gaaatcctca ttccacgaac cgacaccggc
     2641 ccggtcgccg agaaaacgtg cccgcgatga cgagcgataa cccatgcaac gattccgtta
     2701 gccggatgag tacgcgatga gcggcatctc ctcgaaagaa atcttgcgga ttgtgctcgc
     2761 cgggatcggc ctcacgtcgg tatgcgcgct tatttacctg gctggaccac tgatctcgat
     2821 cggcggctgg cgcccgcttg aaaactatat cgtacgggaa atcgccattt tgttgctggt
     2881 ggctgccttt gcgtcggtgc tggccgtcaa ttgg
//
LOCUS       DATILV010000883         2690 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4559231, whole genome shotgun sequence.
ACCESSION   DATILV010000883 DATILV010000000
VERSION     DATILV010000883.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2690)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2690)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2690
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4559231"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(60..836)
                     /locus_tag="VLJ17_21380"
     CDS             complement(60..836)
                     /locus_tag="VLJ17_21380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HSV25565.1"
                     /translation="MPKARKVIPGVDAKLLIKDAAKLLPNPSRRLFLRGATSLGAITL
                     LTGCDVVDEDTAANALLAISRFNDRVQALIFNPNKLAPTYPESAITRPFPFNGYYSED
                     DAPEIDGQTYMLEVGGLVENKKPWTLEELYALPQEKQITRHICVEGWSAIGSWTGTPL
                     RDFLKRVGADLTAKYVWFQCAEGYSNTIDMPTALHPQTQMTFKFDNEILPRKYGFPMK
                     IRIPTKLGFKNPKYVVGMHVTNQNLGGYWEDRGYNWFSGN"
     gene            complement(880..1533)
                     /locus_tag="VLJ17_21385"
     CDS             complement(880..1533)
                     /locus_tag="VLJ17_21385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009799077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HSV25566.1"
                     /translation="MSSGTADASSSDVPRASPEPAAVIHPRWVRITHWINVIAMFVMI
                     TSGWRIYNASPLFRFTFPPAITIGDGFDGLPGALLWHFAAMWLLAVNGIAYLALGIFS
                     GRFRRKLWPIRPPDVIRELRAALTGKLSHDDLSVYNTVQRLLYVGVIAAGVVIVLSGV
                     SIWKPVQFQELTAVFGGYDAARFVHFFAMATIVGFLLIHVTLAILVPKSLRAMILGR"
     gene            complement(1621..2010)
                     /locus_tag="VLJ17_21390"
     CDS             complement(1621..2010)
                     /locus_tag="VLJ17_21390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012029790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HSV25567.1"
                     /translation="MTRRLLSTGSSFEHQGGYSRAVVDGNFCFVAGTTGYDYATMKMP
                     SGVADQARNAFRTIAAVLGDAGFALTDIVRATYYILDRSDADAVLAVCGEYLRDIRPA
                     GTILIVAGLLRPEMKVEIEVTAKRHGV"
     gene            2132..>2690
                     /locus_tag="VLJ17_21395"
     CDS             2132..>2690
                     /locus_tag="VLJ17_21395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018265878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HSV25568.1"
                     /translation="MAKNHPGNYFEDFRLGQVITHATPRTITAGDVSLYTALYGSRFA
                     VQSSNQFARAIGYPNAPVDDLLVFHIVFGKTVPDISLNAVANLGYANCRFLIPVYPGD
                     TLSATSEVIGLSENSNRKTGVVYVRSTGFNAAGASVLEYVRWVMVRKRDEAAESPEKF
                     VPSLPKLVAARDIGKACLPLKDAAYN"
BASE COUNT          599 a          763 c          777 g          551 t
ORIGIN      
        1 cgatggagat caggaaacct tgtcaggaca aatcgaaaca aaattggggc gaggttgcgt
       61 taattgccac taaaccaatt gtagcctcga tcttcccagt agccgcccag attttggttg
      121 gttacgtgca tgccgaccac atacttcgga ttcttgaatc cgagtttggt aggtattctg
      181 attttcatcg ggaaaccata cttgcgcggc agaatttcgt tatcgaactt gaaggtcatc
      241 tgggtctgtg ggtgcagcgc ggtcggcatg tcgatggtgt tggaatagcc ttctgcgcat
      301 tggaaccaga catattttgc cgtcaaatcg gcgccgacgc gcttaagaaa atcgcgcagc
      361 ggcgtaccgg tccatgatcc gatggcgctc cagccttcga cacagatgtg acgcgtaatc
      421 tgtttctcct gcggcagcgc gtataattcc tcgagggtcc atggtttctt attctccacg
      481 aggccaccga cctcgagcat gtaggtttgt ccgtcgatct cgggcgcgtc gtcctcgctg
      541 taatagccgt tgaaggggaa cggccgcgtg atcgcgcttt ccggataagt gggggcgagc
      601 ttgttggggt tgaatatcag cgcttgaaca cggtcattga agcgggaaat ggccaataag
      661 gcgttcgcgg ctgtgtcctc gtcgacaacg tcgcagcctg tcaacaacgt gatggcgcca
      721 aggctggtgg cgccgcgcag aaacagtcgg cgcgacggat ttggaagaag ctttgcggcg
      781 tccttgatca gtagcttcgc atcgacgccc gggatgactt ttcgagcctt aggcacagga
      841 ccctcctcgg ccccctcagg attttgtcaa cgaccaaatt cagcgaccga gtatcatggc
      901 gcgcagactt ttcggcacca ggatcgcgag ggtgacatgg atcagcaaga aacccacgat
      961 ggtcgccatc gcgaaaaagt gtacaaaccg tgccgcatca tacccgccaa agaccgcagt
     1021 aagctcctgg aactgcactg gcttccagat cgaaacgccc gacagcacaa tcacgacgcc
     1081 tgccgcaatc acacctacat ataagaggcg ctgcaccgta ttgtagaccg aaagatcgtc
     1141 gtgagacagc ttgccagtca aagcggcgcg cagctcgcgg atcacgtcgg gaggacggat
     1201 cggccacagc ttgcggcgga accgcccact gaagatacca agcgcgaggt aggctattcc
     1261 gttaacggcg aggagccaca tcgcagcgaa atgccacagt aaggcgcccg gcagcccgtc
     1321 gaatccgtcc ccaatggtga tcgccggcgg aaacgtaaat cggaacagcg gggaagcgtt
     1381 gtaaatgcgc caccccgacg tgatcattac gaacatggcg atgacattga tccaatgggt
     1441 gattcgcacc cagcgggggt gaatcaccgc tgcgggctcg ggggaagccc ttggaacatc
     1501 ggaggagctg gcatctgcgg ttccggacga cattcttacc cccacgcacc gataagatac
     1561 gcgcaagatc ctcgaagata cgcgtaggat ccaccaagat acgcacaaga tcctcgcgct
     1621 ttagacgccg tgacgttttg ccgtcacctc gatctcgacc ttcatctcag gccgcagcag
     1681 gcctgcgacg atcaggattg tgccggcggg tctgatatcg cgcaaatatt cgccacatac
     1741 tgccaggacc gcatcggcgt cggaccgatc cagaatatag tatgttgcac gcactatgtc
     1801 ggtcaaagcg aagccggcgt cgccgagcac ggcggcgatg gtacggaagg cgtttcttgc
     1861 ctggtcagca acgccggacg gcatcttcat ggtggcgtaa tcatagcccg tggtgccggc
     1921 cacgaagcag aaattgccgt ctaccacggc gcggctgtag ccgccctggt gctcgaatga
     1981 cgatccggtg gacaggagac ggcgggtcat caaggtgcct ttcggtgatc ttgggcgcaa
     2041 gtgaaagcaa atttcaatcg gaacatgcta acgctgcctc gccggagagt cgtctagggc
     2101 acgcagcgaa caacaatgaa atgatatcgt catggcaaaa aaccatcccg gcaattattt
     2161 cgaagatttc cgtcttggcc aagtcatcac ccatgcaacg ccgcgcacca tcacggcggg
     2221 ggacgtttcg ctctacacgg cgttgtacgg ttcgcgcttc gcggtgcagt cgtccaatca
     2281 attcgcgcgt gcgatcggct atccgaatgc tccggtcgac gatctgctgg ttttccatat
     2341 cgtgtttggc aagacagtcc cggatatttc gctcaatgca gtcgccaatc tcggctatgc
     2401 gaactgccgt tttctgattc cggtctaccc gggcgatacc ctgtctgcaa cctccgaggt
     2461 cattggactc agcgagaact caaaccggaa aacgggcgtc gtctatgtgc gctcgaccgg
     2521 gttcaacgcg gccggcgctt cggttttgga atatgtccgc tgggtaatgg tgcgaaaacg
     2581 ggacgaggcg gccgaatcgc cggaaaaatt cgtgccgtcg ttgccgaagc tggtcgcagc
     2641 ccgcgacatc ggcaaggcct gcctgcccct aaaggacgcc gcctacaact
//
LOCUS       DATILV010000884         4329 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4822457, whole genome shotgun sequence.
ACCESSION   DATILV010000884 DATILV010000000
VERSION     DATILV010000884.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4329)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4329)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4329
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4822457"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            28..153
                     /locus_tag="VLJ17_21400"
     CDS             28..153
                     /locus_tag="VLJ17_21400"
                     /inference="COORDINATES: protein motif:HMM:NF012424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HSV25569.1"
                     /translation="MAIRQMAYFALSFDHRIIDGSDAERFLAYLKERLEAGQFAI"
     gene            714..1604
                     /locus_tag="VLJ17_21405"
     CDS             714..1604
                     /locus_tag="VLJ17_21405"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HSV25570.1"
                     /translation="MKIKGVVVKRDADTFTVRDLTGADTVVRLTDRTSVKTKGGFLRS
                     GTNYGQTNILRGLNLEVEGRGGSSGELVAESVRFNETDFRTARAVESRATPLEERASA
                     SEGRITEVEQNAQKLSGQLDELAAVSNAARGGAKAAQETADSAVAGVNATNDRISALD
                     DYVPQETTAVNFRTGSAVLSADSKSKLDAIATKALNAKGYVLEVTGYADATGNTAFNR
                     SLSTRRADAVIRYLVEQHQIPLRRVITPYGFGSTNPIADNKTRDGRAQNRRVEVKVLV
                     NKGLTQPAPTMTPGSSGSGQ"
     gene            1748..2914
                     /locus_tag="VLJ17_21410"
     CDS             1748..2914
                     /locus_tag="VLJ17_21410"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HSV25571.1"
                     /translation="MDLSKYRKYLPPALVLSALALSFSAALFFNPQARAQKLKQLPPP
                     PPAPRFKPRPTPTPAPTPEPEYEVIRVSSNLVVVPVSVTDPQGQPVLGLKQTDFHIEE
                     GGRAQEISQLGDPEQVPLDIALLIDVSSSVTERFAFEEQAATRFLKEVLRPTDHATVY
                     AIDRTPRLEQARATADIATARLMSIKAATGPSPTAFYDTVIEAARYLAQNTPDQNRRV
                     IVVISDGEDNFSNRVRDSSLAAYRAMQADDNDTSPAAKKRMRTASENALQQGHRKAQA
                     EVQQEVQKANAVFYSINPSGEALKLNVISTRAQEAMQQLAGATGGTAFVPERIADLEP
                     VFSRILNELRAQYLLQYYSNDKSGGNAFRRIAITIPAQTQLRVRAREGYYPKAK"
     gene            complement(2945..3379)
                     /locus_tag="VLJ17_21415"
     CDS             complement(2945..3379)
                     /locus_tag="VLJ17_21415"
                     /inference="COORDINATES: protein motif:HMM:NF013052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SET domain-containing protein-lysine
                     N-methyltransferase"
                     /protein_id="HSV25572.1"
                     /translation="MSARIFRIGRALTGLGLFAIRPIKRGAYIATYRGRRVTTEEADR
                     REARGARYLFTLNKRWAIDGSPRWNVARYINHSCKPNAEALISGRRVWIWSRKNIKAG
                     EEINYDYGKEYFEGIIEPLGCKCERCGVKSKTSRTNGKRNRS"
     gene            complement(3443..>4329)
                     /locus_tag="VLJ17_21420"
     CDS             complement(3443..>4329)
                     /locus_tag="VLJ17_21420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSV25573.1"
                     /translation="WGHAVGGMGAITHAMARSAGEQGVRVDLGSEVREVLIEGDHAAG
                     VVLKDGTAVRARAVVANVNPQMLFQALVPQDAVPVATAKRMKAWKAGSGTFRMNVALS
                     KLPEFSALPGVGDHHTAGIILAPSLAYMDQAYCDCVSSGWSRKPIVEMVIPSTLDDSL
                     APPSAHVASLFCQHVTPEFADGSTWDAYRETVADVMIDTVEAHAPGFKQSVIARQSLS
                     PLDLERMFGLPRGDIFHGAMTLDQLFSARPMLGYADYRMPIPGLYLCGSGAHPGGGVT
                     GAPGHNAAQAVIADLLRR"
BASE COUNT          969 a         1274 c         1211 g          875 t
ORIGIN      
        1 ctgacgtcgg ccgacggcga agactacatt gcaatccgcc agatggcgta cttcgcgcta
       61 agctttgatc atcgcattat cgacggctca gacgcagaaa ggtttctcgc ctatcttaag
      121 gagcggctgg aggcggggca gttcgcgata tagatcacag tggcgaacac gaggtcaggc
      181 gacattgagt gactggccca ccgcttacgc gggtggtaac gacactcatc acggcgacaa
      241 agcatgtcac tgtttatcgc gctcaaccta aattttcttg caaaccccta gcgaagcaat
      301 aatgaatcgc tagtaactgc gtttggtgcg ctgtttccgt cgttatggtc ttgacaggtt
      361 tatccggttc tatactattc gtatgttcaa gttgatgtag caccagcctt agcagctcat
      421 cgacccgacg ttctctaaaa aacgtctgcc gaaacctggc agacaaggta aatgaggagt
      481 tcatcgtctg aactcgacaa cttgttggac gcggtaaggc tgcgcgtctg ccatacagat
      541 gataaggagt tgaaaattct atgactatca acctaagaac acttcgttca ctcgcgcttg
      601 ctttcgggtt ggcgctggct ctttccccat tagctttcgg acaagactcg acaacaccaa
      661 ccaaaacgcc gactgatgcg acaagagccc gctctgtctc aagcggcgaa aagttgaaga
      721 tcaaaggtgt ggtggtgaaa cgtgacgctg acacatttac cgttcgtgat ctaactggcg
      781 ccgataccgt cgtacggctg actgacagaa cttcggtcaa gaccaagggc ggcttcctgc
      841 gcagcggcac gaactatggc cagacgaaca ttcttcgcgg cctcaatctc gaagtcgaag
      901 gacgcggcgg atcgtcgggc gaattggtcg ccgagagcgt tagattcaat gaaactgatt
      961 tccgtaccgc ccgggcagtt gagtcgcgag ctacgccact cgaagaacgg gcctcggcat
     1021 cagaaggacg gatcaccgag gttgagcaga atgctcagaa gctttccgga caacttgatg
     1081 aactcgcagc cgtttcgaat gccgcccgcg gcggcgccaa ggcagcccag gagactgccg
     1141 actcggcagt ggccggcgtc aatgccacca acgaccgcat ctcagcgctt gatgattatg
     1201 tgccgcagga aacgacggcc gttaatttcc gcacgggcag cgcagtgctg tcggcggaca
     1261 gcaagtccaa gctggatgcg attgccacca aggcactcaa cgccaagggc tacgtgctcg
     1321 aggttaccgg ctatgcggat gccaccggaa acacagcgtt caatcggtct ttgagtacca
     1381 ggcgagctga cgcagtgatt cgctacctgg ttgaacaaca ccagattccg ctccgccgtg
     1441 tcattacgcc atacggcttt ggctccacga atccaatcgc tgataacaag actcgcgatg
     1501 gccgcgctca gaatcgtcgc gtcgaagtta aggtgctggt caataaaggt ctaactcagc
     1561 ccgcgccaac aatgacgccg ggcagcagcg gttcaggaca gtgagggtag cgcacgtcgt
     1621 taacttgccc ctgtaaccaa aatggcgcaa ctttacaagt tgccccagcg ccaacgatca
     1681 tgccgtcagt cggcgtcata tgatttgcca gcaacgatgt gagctggcgg catgaggagt
     1741 tggtttgatg gacttgagca aataccggaa atatctaccg ccagcgctgg ttctatcagc
     1801 gctggcttta tctttttcag cagcgctttt cttcaacccg caggcccgcg cccaaaagct
     1861 caagcagttg ccgccgccgc cgcctgcgcc gcgtttcaaa cccagaccga cacctacacc
     1921 ggcccctacg cctgaacccg aatatgaagt tattcgtgtt tcttcaaacc tggtagtcgt
     1981 gccggtttcc gttactgacc cgcagggaca gccagtcctc ggtttaaagc agaccgactt
     2041 tcatatcgaa gaaggcggac gtgcgcagga gatttcgcag ttgggtgatc cggaacaggt
     2101 gccgctggat attgctctct tgatcgatgt ctcgagcagt gtaaccgagc gatttgcgtt
     2161 cgaggagcaa gcggccacac gtttcctcaa agaggtctta agacccaccg atcatgccac
     2221 cgtctacgcg atcgatcgca cgccacgact tgagcaggca cgtgccacgg ccgatattgc
     2281 cacggccaga ttgatgtcga tcaaggccgc cactggaccc agtccgacag ccttttacga
     2341 tacggtaatc gaggctgccc gctacctggc gcagaataca cccgatcaaa accggcgcgt
     2401 gatcgtggtc atttcggacg gcgaagataa cttcagcaat cgcgttcgtg actcgtcgct
     2461 ggcggcttac cgggcgatgc aggccgatga taatgacacc tcgccggccg ccaaaaaacg
     2521 tatgcggacc gcttcagaga acgcgctgca gcagggtcat cgaaaggccc aggctgaggt
     2581 gcaacaggaa gtgcaaaagg caaacgcggt cttctattca atcaatccga gcggggaagc
     2641 actgaagctg aacgtcatca gcacccgcgc acaggaagct atgcaacaac tcgccggcgc
     2701 aaccggaggg acagccttcg ttcccgaaag gattgcagat ctggaaccgg tcttcagtcg
     2761 catcttgaac gaactgcggg cgcaatatct gctgcagtac tactctaacg ataaatccgg
     2821 cggcaacgct ttccgccgca tagcgattac tattcctgct cagacacaat tacgcgtccg
     2881 ggcgcgtgaa ggctattacc ctaaagcgaa ataggcaaag aagtggttgg tcgcaggtgg
     2941 cgtttcagct gcggtttcgc tttccattcg tcctggatgt tttggatttg acgccacacc
     3001 tttcgcattt acagcccagc ggctcaatga ttccctcgaa atactccttg ccgtaatcgt
     3061 agttaatttc ttcgcccgcc ttgatattct ttcgcgacca aatccatacc ctgcggcccg
     3121 aaataagcgc ttcagcattc ggcttgcagg agtgattgat gtaccgggcc acgttccagc
     3181 gcggcgagcc gtcgatggcc caccgcttgt tgagcgtgaa caaatagcgc gcaccgcgcg
     3241 cctcgcgtcg gtcggcttcc tcggtggtga cgcggcggcc gcggtaggtt gcgatatagg
     3301 ccccgcgttt gatcggcctt atggcgaaga ggcccagtcc cgttagggcc cggccaatcc
     3361 gaaagattcg cgcagacata ttttgcgaat acccgcaaat cgcccggatg tcatgtgctt
     3421 gcgttgaatt gcaaacaaca cttcacctgc gcaaaagatc ggcaatcacc gcctgcgccg
     3481 cattgtggcc cggcgccccg gtgacgccgc cgcccggatg cgctcccgaa ccgcacagat
     3541 aaagcccagg aatgggcatg cgataatcag catatcccag catggggcgg gctgagaaaa
     3601 gctggtcgag cgtcatggct ccatgaaaga tgtcacccct gggcaagccg aacatgcgct
     3661 cgagatcgag gggcgagagg ctttgccgcg caatgacgct ttgcttgaag cccggcgcat
     3721 gcgcctcgac cgtgtcgatc atcacatcgg caaccgtttc gcgatacgcg tcccaggtcg
     3781 agccgtcggc aaattccggg gtgacgtgct gacagaagag gcttgcgaca tgggcgctcg
     3841 gcggcgcgag actatcgtca agcgtcgagg gaatgaccat ctcgacgatc ggctttcggc
     3901 tccagccgga actgacgcaa tcgcaatagg cctgatccat gtaggccagg ctcggcgcca
     3961 ggataatgcc ggccgtgtga tgatcgccga cgccgggcag tgcggaaaat tccggcagct
     4021 tcgacagcgc gacgttcatc cgaaacgtcc cggagccggc cttccacgcc ttcattcgtt
     4081 tggccgtcgc caccggcacc gcatcctgtg gcaccagcgc ctggaagagc atttgcggat
     4141 tgacattggc gacgacggcg cgcgctcgta cggccgtgcc gtctttcaac acaaccccag
     4201 cggcgtggtc accctcgatg agaacttcgc gcacctcgga gccaagatcg acgcggacgc
     4261 cttgttcgcc ggcggatcgt gccatggcgt gcgtgatcgc gcccatgccg ccgacggcat
     4321 gtccccaca
//
LOCUS       DATILV010000885         3712 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2261732, whole genome shotgun sequence.
ACCESSION   DATILV010000885 DATILV010000000
VERSION     DATILV010000885.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3712)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3712)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3712
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2261732"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..694)
                     /locus_tag="VLJ17_21425"
     CDS             complement(<1..694)
                     /locus_tag="VLJ17_21425"
                     /inference="COORDINATES: protein motif:HMM:NF013146.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase"
                     /protein_id="HSV25574.1"
                     /translation="MRAAVGDIPWVPIAAVTLVGAAFATALLIVVLGPLLRRYALANP
                     GARSSHQVPTPQWGGIAVITAATAAICTSSLLLLPEVTTSSQLTTLLAAVILLACVGA
                     LADIRQVAVAARLLLQILAVAAVVYQLPSDLHVLPVLPTWIERTLLVFGGVWFVNLVN
                     FMDGLDLMTAAQVVPVTAAIVVIGLFGLLPSEAVVISLAICGAMIGFSFFNRPVAKLF
                     LGDVGSLPIGLVV"
     gene            890..1969
                     /locus_tag="VLJ17_21430"
     CDS             890..1969
                     /locus_tag="VLJ17_21430"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSV25575.1"
                     /translation="MSLSIILPNYNNGHLIERALLALLDQTPPAQEIIVVDDGSTDNS
                     VEVVEALQRLHPSIRLIRNQANHGIIASVKTGLKFATGEFLLFAAADDFVFPGLFGRA
                     LAALRTYPDAAFFSAGVALLDTHDRVIGLRPVTVPRRDPGYVSPADVRRIIGHSDFWV
                     LGTATVYRHQPLASIGYFDAHLGSLGDVLANRLLAFNHGFYFEPEVLAAYNKDPMSFS
                     AQKALSVTESRQLLDAAAAWIAENLPEDIRGEHGPLFDRRMRFGLARLWVIWRSGRLD
                     ANSMSDILNFGRFDRAILRAIARMPFGSDYLGLGWMTLRTPPFSLPTLLEAWWRAQRF
                     RWLERREVQNKVDGAARRPGSSPRS"
     gene            2095..2730
                     /locus_tag="VLJ17_21435"
     CDS             2095..2730
                     /locus_tag="VLJ17_21435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009737037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HSV25576.1"
                     /translation="MAETSKSENARILLDLLNSVESDGGQSQRRLASELGIALGLVNA
                     YLRRCVKKGLLKVTEVPKRRYIYYLTPQGFAEKSRLTVEYLSVSFDFFRRAKAECGVL
                     FNAARERGLPRVALAGISDVAEIAMICALDTGVTVVAIVDERATLTKFIGVPVASSFE
                     AISGTCDAVLITDLRRATELSERASTLFGRDRVFTPNLILPPRRVPNEKRT"
     gene            2736..3257
                     /locus_tag="VLJ17_21440"
     CDS             2736..3257
                     /locus_tag="VLJ17_21440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009796784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional activator RfaH"
                     /protein_id="HSV25577.1"
                     /translation="MTKSPPAESAWHVVQVHVHAETKARMHLSRQGFETYLPLYLKRR
                     RHARRTDTVAAPLYPSYLFVRFNPSIHRWRSIHSTIGVVRLVCNGDVPAALDQAIVES
                     LKSRENAQGFIQLDRRPKFALHDKVRVCDGVFADCLGLVEGVSDRDRVVILLNMLGRK
                     VRVLLDEELVVAA"
     gene            3368..>3712
                     /locus_tag="VLJ17_21445"
     CDS             3368..>3712
                     /locus_tag="VLJ17_21445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25578.1"
                     /translation="MQRVLALNIPQRSAQRSRYRIALIDILAGVQAIDIWSRLGWRDT
                     KRRYRRTVFGAFWTTASLAFFVLTLGVIWANLWGQDAKTYLPYLTSGMVCWTLFSAIC
                     TEGGVCLIGQERL"
BASE COUNT          795 a         1036 c         1051 g          830 t
ORIGIN      
        1 caaccacaag cccgattggg aggctgccga catcgccaag aaacagcttt gcgacaggcc
       61 gattaaaaaa gctgaatccg atcatcgcac cgcagatggc aagactgatc accacggcct
      121 ccgacggcag caggccaaac aagccgatca ctacaattgc ggctgtaaca ggaacgacct
      181 gcgccgctgt catcaagtcg agaccgtcca taaagtttac gaggttgacg aaccatacac
      241 ctccaaacac gagcagcgtg cgctcgatcc acgtcggtaa cactggcaat acgtgcaggt
      301 ccgacggcag ctgataaact actgccgcga cggcgagtat ttgcagcagc agccgcgctg
      361 caactgcgac ctggcgaatg tcggctaagg cgccaacgca cgctagaaga ataacagcag
      421 cgagcagcgt cgtaagttgc gacgacgttg ttacctcggg cagcaataat agtgaggatg
      481 tgcagattgc tgcagtggct gcagtgatga ccgcaattcc gccccactgc ggtgtgggta
      541 cttggtgcga tgaacgggcg cccgggttcg ctaacgcgta tctacgcaac aatgggccta
      601 ggacaacgat caataaagcg gtcgcgaacg ctgcaccgac aagggtgaca gcggcgattg
      661 gcacccaggg aatgtcgcca actgcagccc tcattaggtc aacctactat caaaccggcg
      721 ctatggtaaa tcgcgtattg tccgtccgac ccggtcgatt gatcaaatca gcgctggacc
      781 gcagctccat tccaaatgta tagcagcgtc tccgcatttt aaatcggtaa cgctattgcc
      841 gcagttagcc caagattcat tcgacacagc aaccgatcgg cacacgacaa tgtcgttgtc
      901 gataatcttg ccgaattaca ataatggcca cctgatcgaa cgggcactgc tggcattgct
      961 cgaccagaca cctccagcgc aagaaattat cgttgtcgac gatggatcga ccgacaacag
     1021 cgtcgaagta gtcgaagcgt tgcagcgtct gcatccatcc atccgcctca tccgcaatca
     1081 ggcgaaccat ggcatcatcg cctcggtcaa aactgggctc aaatttgcga ctggtgaatt
     1141 tcttttgttc gcggcagccg acgattttgt ttttcctggc ctgtttggtc gcgcgctcgc
     1201 cgctttgcgg acctacccgg acgcggcttt tttttccgcg ggcgttgcgc tgctcgatac
     1261 ccatgatcga gtgattggtt tgcgcccggt tactgtgccc cggcgcgatc ccggttatgt
     1321 atcgccggcg gatgtcagac gcataattgg acacagtgat ttttgggtac tgggcacggc
     1381 cacggtttac aggcaccaac ccctggcgag catcggatat ttcgatgcgc atttgggatc
     1441 gctgggcgac gtattggcca ataggttgct cgccttcaat cacgggttct atttcgagcc
     1501 agaggtattg gctgcttaca acaaggatcc aatgagcttt tccgcccaga aggcgttgtc
     1561 ggtcaccgaa agccggcaac tgcttgatgc tgcggcggcg tggatcgcag aaaacttgcc
     1621 cgaagatatt cgcggcgagc atgggccctt gttcgaccgc cgcatgcgct tcggcttggc
     1681 gcgtctttgg gtcatttggc gcagcgggcg ccttgatgcc aactcgatgt ctgacatttt
     1741 gaatttcggt agattcgacc gggccatttt gcgagccatt gcgcgcatgc cgttcggctc
     1801 agactatctc gggctcggct ggatgacgct gcggacgccg ccgttcagct tgccgacatt
     1861 gctggaggct tggtggcggg cgcaacgttt cagatggcta gaacgcaggg aagtccagaa
     1921 caaagtggat ggcgcggcgc gacggccggg ttcatctccc agatcgtaaa ccgcccgact
     1981 tcaaaaatac cttaatattg tcaagtgctt atttgatgtt catgcggtga acaaaagcct
     2041 tgacgttcgt tcaccgcgtg aacattgtag cgcagcgatc ggtcggggaa cctcatggct
     2101 gagacgagca agagcgaaaa tgcgcggatc ctgctcgacc tactgaattc ggttgagtcc
     2161 gatggtggcc agtcgcagcg gcggctcgcc tcggaacttg ggatcgccct cggtctggtc
     2221 aatgcctacc ttcgccgatg cgtgaaaaag ggcttgttga aagtcaccga agtccccaag
     2281 cgccgttata tttattacct cacgccgcag ggctttgccg agaaatcacg tctcaccgtc
     2341 gaatacctgt cggtctcatt tgactttttc cggcgcgcga aagccgagtg tggcgttctc
     2401 tttaatgcgg cccgagaacg cggcttgccg cgtgtcgccc tcgctggcat ttccgatgtc
     2461 gcggaaatcg cgatgatctg cgctctcgac accggtgtga cggtcgtcgc gatcgtcgac
     2521 gaacgagcga ccttgacaaa atttatcggc gttccggttg cgtcctcttt cgaagctatt
     2581 tctgggacct gtgatgccgt gttgatcacg gatttgcggc gcgccaccga gttgagcgaa
     2641 cgggccagca ccctgtttgg ccgggatcgc gtgttcacgc caaacttgat cctgccaccg
     2701 cggcgcgtgc ccaatgagaa gcggacgtga tcgtcgtgac taaatcgccc ccagcggaat
     2761 cggcctggca tgttgttcag gtccatgtgc atgccgaaac caaagcgcgg atgcacctct
     2821 cccgacaggg cttcgaaaca tatttgcctc tttatctaaa gcggcggcgc cacgcgcgcc
     2881 ggaccgacac tgtcgccgct ccactctatc cctcttatct gttcgtgcgt ttcaatcctt
     2941 cgatccatcg atggcggtcg attcactcga ccataggggt ggtacggcta gtttgtaacg
     3001 gcgacgtgcc cgccgcactg gatcaggcga tcgttgaaag tctgaaaagc cgcgagaatg
     3061 cacaaggctt tattcaactg gaccgccggc cgaaatttgc gcttcacgac aaggtgcgcg
     3121 tctgcgacgg cgtctttgcc gattgtctgg gcctcgtcga aggcgtgagt gatcgtgatc
     3181 gcgtcgtcat tttgctcaac atgctcggcc gcaaagtgag agttctccta gacgaggaac
     3241 ttgtcgtagc ggcgtgagca ggccagagca aacgtctaga agatcgggtg gccgttagtc
     3301 acccgaactg cggtagcgtg ggaattacac ttaaggaaac cgatcaagaa agacgcgaat
     3361 tggcccgatg caacgcgttc tagcattaaa cattccgcaa cggagtgcac agcgatcacg
     3421 atatcgcatt gccctgatcg acatacttgc cggagttcaa gcgatcgata tttggtctcg
     3481 cctcggttgg cgcgatacca agcggcgtta tcggcgtacc gtttttgggg cattctggac
     3541 gacagcgagt cttgccttct tcgttctgac gctgggcgtc atctgggcaa atttatgggg
     3601 ccaggatgca aaaacctacc tgccgtattt aacatcggga atggtgtgct ggaccttatt
     3661 ttcggcaatt tgcacagaag gtggcgtttg tcttattggc caagagagac tc
//
LOCUS       DATILV010000886         5659 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_728225, whole genome shotgun sequence.
ACCESSION   DATILV010000886 DATILV010000000
VERSION     DATILV010000886.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5659)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5659)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5659
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_728225"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..830
                     /locus_tag="VLJ17_21450"
     CDS             <1..830
                     /locus_tag="VLJ17_21450"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSV25579.1"
                     /translation="ATSPLSLLMRKDEEHLIHEKIAVPNASPRVSRPRLLQLLAKNVA
                     CCNATIINGRAGTGKTTLAADFARHAGRPVSWYKVDAADSDLRMFCEYLSTAVGVRRL
                     SMDTERLLQLTETVESDRAELLAEAFVFQLSEEKSEPLLIVIEDLHLVYDADWVIPFF
                     RRLLPLLPPDVHLLITCRSLPPAPLWRLRSKQMLRVLEETELAFNLNEVIGLFETYGL
                     GEEPARIAWDRTNGRAAAIAEFAATPGRAGRAFADSLLSLERSTFKSLAGQAPDFQT"
     gene            1024..4317
                     /locus_tag="VLJ17_21455"
     CDS             1024..4317
                     /locus_tag="VLJ17_21455"
                     /inference="COORDINATES: protein motif:HMM:NF037660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /protein_id="HSV25580.1"
                     /translation="MNVVPVNAPDFSGKFFLRTKLLPPRPAPEILARPRLIERLQANL
                     SLPMTLVTANAGSGKTTLVADFLRKQERPYVWYQLDHTDADPAVFLGYLAYGIQQRVE
                     GFGETIFAFLQQAQELAQQPERAADVLLNEILEGVEQQMILVLDDYHHLGGETPVHAV
                     LDRLIAYLPDVIHVIIISRDIPPLTLARLRSQDSLSIIDRGDLLFTDEETQELFRKVF
                     GLALTAEQLREYGERTHGWITALQLVRQVAQRQAGSAAPDKAPDPLAVLHQSERDIFE
                     YFAEEVFAAESPEIQQYLMRIALLDRIEVETCARLFPQIISSAILPALVRGNVFMTVA
                     GDGRGEEYRLHPLFQSFLRRRLRAETGVAGVSAEHARYAQYFLERAAWEQAVRHLLEA
                     EDFQRAAEIIAEHGSKWIASGKLGSLASLSEALPSAAVEAHPRALAYRAEVARLRGEF
                     ESAQNLFRRAIAFLRDRADREGEAEALHSLATIARRRGDYRAVFEYLDRAVDLTEPTS
                     VVRTKCGNTRGLCLVSLGDWTAAEREFRVALQSAEEQSDEHHVRLITHNLGLPAMMRG
                     DFGEALRWLRRMLRTESGEPPIPQEAWAHLNIARCHLYRGEMDACEQHLDRALERCQL
                     FNLVGQLGEAFEAYGNLYCARGDLARAAEFYERAARFYDEAGIDLARVELLEEQAFLS
                     LRAGDAARARGQIDRLVERRPADKNDIGHFTATLARGLILLAQSEYAEAGKELDPALN
                     YFHQRGLYYYEAQAGMALAICDFSSSREPQMLERLRRVLDLAARYDYEYWLRQEIASH
                     PALFASEDARELLPADLVTQALKGSVAARPALETIMTPAAVLTIPLVDLTINMLGPVE
                     IVRDIARPFAADAWTTRRARDILCFIASRSHHRTPKDTIIDTFWRETDLKSVEKNFHP
                     TMSHIRKALNSNQPLKQNFLVYRDGDYQLNPEFSYRIDTEEFDRLIADGETARRERDF
                     DRCIACYEGAVAVYRGEFMQGSYEDWVDEQRSYYREQYLRMLEALAGVAEKKSDWSRS
                     MDLAQRILHEDPFREDIHCMVMRSQAAMGNRVAVKEQYETLRRLLQKELGVEPAMQTQ
                     KAYHDLVGS"
     gene            4553..>5659
                     /locus_tag="VLJ17_21460"
     CDS             4553..>5659
                     /locus_tag="VLJ17_21460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25581.1"
                     /translation="MMIRRLYNKSRQSIALALVVLLNSIPAMAGLTIIGSNGITVSGA
                     DGIDYQSTNGITASGADGILAFGPNGITASGADGITASGADGITASGADGITASGADS
                     MTIMRADGITASGADGITISGADGSIYHPDSVIIRNPTGITVSGADNVIATGTNGITA
                     SGAGTRNINHADGITASGADSTLTVNGADGIIATGADGTVFSITPNAVTITGVSGITA
                     SGADGITISGADNFVLTGVNSVISALNYAGAQAGLQSVDPEFAVLLNRLTDDSNIDAV
                     IIYYHLPTDADIADLQAIGVLGGTRYRTLPMISVTTTKRRIAAISQLPSVRALYSNRT
                     LQWNLEPAARNLTGVERVRRNAELTNANRGLPVSG"
BASE COUNT         1177 a         1632 c         1651 g         1199 t
ORIGIN      
        1 tcgccacgag cccgctatca ctacttatga gaaaagacga agaacacctc atccacgaga
       61 aaattgccgt tccgaatgcg tcaccaagag tgtctcgccc tcgtttgctc caactgctgg
      121 caaagaacgt ggcgtgctgc aacgccacga tcattaacgg ccgagccggg accggcaaaa
      181 ctaccttggc cgctgatttc gcgcggcatg cggggcgccc ggtctcctgg tacaaagtgg
      241 acgccgccga cagcgacctg cgcatgttct gcgaatacct ttcaaccgcc gtgggcgtgc
      301 ggcggctgtc gatggatacc gaacgtttgt tgcaattgac agaaactgtc gagagcgacc
      361 gggcggaact cctggctgag gcgtttgtct ttcagttaag cgaagaaaaa tcagagccct
      421 tgctgatcgt catcgaagac ctccatctgg tctacgatgc cgattgggtc attccttttt
      481 tccgccggct gctgccgttg ctgccgccgg atgtacatct gctgattacg tgtcgcagtc
      541 tgccgccggc tcccttatgg cgcttgcgct cgaagcaaat gctgcgggtc ctggaagaaa
      601 cggaactggc attcaacctc aacgaagtca ttggattgtt cgaaacgtat ggactgggag
      661 aagagccggc acgcattgcc tgggaccgga cgaacggccg ggcggcagcg attgccgagt
      721 tcgcagccac gccgggacgc gcggggcggg cctttgccga tagtcttttg tcactggagc
      781 gttcaacgtt caagtcgctt gccggccagg cccctgattt tcaaacttaa tcttcagatc
      841 tcacgggcca tgcctgagtt gattcgatcc cctcttcccg ctgcaggcgc gaaccgccgc
      901 gcaatcctct tagactgtct gcttaccaat agaactcgcg ctttgggctg tgttaatctc
      961 cgcggcagtc aaaaatctca gctgggtata ttgatggaca gtcaggaacg tcgaactgga
     1021 cctatgaacg tagttccggt taacgccccg gatttctccg gtaagttctt tctgcgaacc
     1081 aagctcctgc cgccgcgacc ggcgccggag atcctggcgc gtccgcgcct gatcgaacgt
     1141 ttgcaggcaa atctctcact gccaatgacg ttggtgacgg ccaacgccgg ctcgggaaag
     1201 actactctgg ttgccgactt tctgcgcaag caggagcggc cttacgtttg gtatcaactg
     1261 gatcacacgg atgccgaccc ggctgttttc ctcggttacc tggcttacgg aattcaacag
     1321 cgagtcgaag gtttcgggga aacgatattc gcgtttctgc aacaggcgca ggaactggcc
     1381 cagcagcccg aacgggctgc cgacgtactc ttgaatgaaa ttctggaagg cgtcgagcag
     1441 cagatgatcc tggtcctgga cgattaccac cacctgggcg gtgagacacc ggttcatgcc
     1501 gttctcgatc ggctgattgc ttatcttccg gatgtgatcc acgtgatcat tatctcgcgg
     1561 gacattccac cactgaccct cgcacggctg cgctcgcagg attcgctctc aatcatcgat
     1621 agaggcgatc tgctttttac cgacgaagag acgcaggagc tgtttcgcaa ggtcttcgga
     1681 ctcgccttga ccgcggagca attgcgcgag tacggcgagc gcacccacgg ttggatcacg
     1741 gccctgcaac tcgtgcgtca agtggcccaa cgacaggcgg gttccgccgc gccggacaaa
     1801 gcgccggatc cgttagcggt gcttcatcaa tcagaacgcg atattttcga gtattttgcg
     1861 gaagaggttt tcgcagctga gtccccggaa atccagcagt atctgatgcg aattgctctg
     1921 ctcgatcgca tcgaagtgga aacctgcgcg cggctcttcc cacagattat ttcttccgcg
     1981 attctgccgg ccctggtgcg aggtaatgtg tttatgaccg tggccgggga tggccgcggc
     2041 gaagaatatc gtctgcatcc gctctttcaa agttttctgc gccggcgtct gagggcggag
     2101 accggggtgg cgggcgtttc cgccgagcat gctcgttacg ctcaatattt tctcgagcgc
     2161 gcggcgtggg aacaggcagt gcgacatttg ctcgaggcgg aagattttca acgggcggcc
     2221 gagattatcg ccgaacacgg aagtaaatgg atcgcttcgg gcaagctggg ttcactggct
     2281 tcgctgagtg aagcgctgcc ctcggcagca gttgaggcgc acccgcgcgc gctggcctat
     2341 cgggctgagg ttgcccgcct gcgcggtgaa ttcgagtcag cgcaaaatct gtttcgccgg
     2401 gcgatcgctt tcctacgcga ccgcgccgac cgtgaaggcg aagctgaagc cctgcattca
     2461 ctggccacca ttgcgcgccg gcgcggcgac tatcgggcgg ttttcgaata cctggaccgc
     2521 gcagttgatt tgactgagcc cacctcagtc gtacgcacca aatgtggcaa cacccgcgga
     2581 ctttgtttgg tttcgctggg cgattggact gcggctgagc gagaatttcg tgtcgctttg
     2641 caatccgccg aagaacaaag cgacgaacac cacgtccggc tgatcaccca taacctcggt
     2701 ttgcctgcga tgatgcgcgg agattttggc gaagctctcc gctggctgcg ccggatgctg
     2761 cggaccgaat ccggagagcc acccatcccg caggaagcct gggcacacct gaatatcgcg
     2821 cgctgccacc tttatcgcgg ggaaatggac gcctgcgaac aacatctcga ccgtgcgctg
     2881 gagcgttgcc aactcttcaa cctggtaggc caactcggcg aggcgttcga agcctatggc
     2941 aatctgtatt gtgcgcgcgg tgatttggcg cgagccgcgg aattttatga acgggcggcc
     3001 aggttctatg acgaagcggg aatcgatctg gcccgagttg aactactgga agagcaggcc
     3061 ttcctgagtt tgagggctgg tgatgcggcg cgagcacgcg ggcaaatcga tcgactggtt
     3121 gaacgtcggc ccgccgacaa aaacgacatc ggccacttca cggctaccct ggcgcgcggt
     3181 ctgattctat tggctcaatc tgaatacgcg gaagcgggca aagaattaga tccagcgctc
     3241 aactattttc atcagcgagg tctttattac tatgaagcgc aggccggaat ggcgctggcg
     3301 atttgtgact tttcctcgtc gcgcgagccg cagatgctcg agcgcttgcg ccgtgtcctc
     3361 gatttggccg cccgctatga ctatgagtat tggctgcggc aggagatcgc gtctcatccg
     3421 gcgctatttg catccgaaga cgcccgggaa ttgctgcccg ccgatttggt aactcaggcc
     3481 ttaaagggtt cggttgcggc gcggcctgct ctcgaaacca taatgacgcc cgcagcggtg
     3541 ctgacgattc cgctggttga tctgaccatc aacatgctgg ggccagtcga aattgtccgg
     3601 gacatagccc ggccgttcgc tgccgacgcc tggactacgc gccgggcgcg cgacattctg
     3661 tgcttcatcg cttcccgcag ccaccatcgc actcccaaag acacgatcat cgatacgttc
     3721 tggcgcgaaa ccgatctcaa aagcgtagaa aagaattttc accccaccat gtcccacatt
     3781 cgtaaagcgc tcaacagcaa tcagccgctt aagcagaact ttctcgtcta tcgcgacggc
     3841 gattaccagc ttaaccctga attctcctac cgcatcgaca cagaggaatt cgatcggctg
     3901 atcgccgatg gcgagacagc acggcgcgaa cgcgattttg accggtgcat tgcttgctac
     3961 gaaggggcgg tcgcggttta ccgcggcgaa ttcatgcagg gcagctacga agactgggtc
     4021 gatgagcaac gctcgtatta tcgcgagcag taccttcgca tgctcgaggc gctggccgga
     4081 gtggctgaaa agaaatcgga ctggtctcgc tcgatggatc tggcgcaaag gatcctgcac
     4141 gaagatccat ttcgtgagga tattcactgt atggtcatga gatctcaggc agccatgggt
     4201 aaccgcgtgg cggtgaaaga gcagtacgaa acattgcgta ggctcttgca gaaggaatta
     4261 ggtgtcgagc ctgcaatgca aacacagaag gcctatcacg acctggtagg cagttgattt
     4321 ttgggggcgt gttacctgcc gccgttaacg aacccggcga gtcagcttcg tggctaaact
     4381 tgagtaaatg caaacggtta ccaacaaggc aaatgcaagc tgaacgcaac aaacgcggtc
     4441 ggctcagtga tttagaattc gcctgccgtc ccggttcgtt tgacaactac acctcggtgg
     4501 attcgcagct tacaagctac tgtcttgacc cgaccgtggc gatggcttgt gcttgatgat
     4561 tcgcagactc tacaacaaat ctcgtcaatc gatcgcgctc gcgctggtag ttttgctgaa
     4621 ctctattccg gcgatggccg ggttgactat cattggatca aacggcatta ccgtgagcgg
     4681 cgctgatggc attgattacc agagcactaa tggcatcacc gccagcggcg ccgatggaat
     4741 tctggccttt ggaccaaacg gcattactgc atcaggggcc gacggtatta cggcctcagg
     4801 cgcggatggc atcactgcca gcggcgccga cggcattact gcgtcagggg ccgactcgat
     4861 gactatcatg cgggcggacg gcattacggc cagcggtgcg gacggtatta cgatcagcgg
     4921 cgctgacggc agcatctatc atccagactc agtaatcatc aggaacccaa ccggtattac
     4981 tgtcagtggc gctgacaacg taatcgcgac cggcaccaac ggcatcaccg ccagcggcgc
     5041 cggcacgcgc aacatcaatc acgctgatgg catcaccgcc agtggcgccg atagcacttt
     5101 gacggtcaat ggggccgacg gaataatcgc aaccggcgcg gatggaaccg tgttttcaat
     5161 cacgccgaac gcggtgacga tcacaggcgt cagtggcatc accgccagcg gcgccgacgg
     5221 gattaccatt agcggtgctg acaactttgt cctgacgggg gtcaactcgg tcatttccgc
     5281 cctaaactat gctggggctc aggctggttt gcagagcgtg gatccggagt tcgcggtcct
     5341 gctcaatcgc ttgactgacg acagcaacat cgacgctgta ataatctatt accacctgcc
     5401 cactgacgct gacatcgccg atttgcaggc cattggcgtt ctaggcggca cgcgctaccg
     5461 aacgttgccg atgatctctg tcacgacgac caagcggcgg atcgcagcga tctcgcaact
     5521 gccgtcggtg cgtgcgcttt acagtaatcg gacactgcag tggaacctcg aaccggcggc
     5581 acggaacctg accggggtcg aacgcgtgcg tcgcaatgcc gaactcacca acgcaaaccg
     5641 gggattgcca gtcagtggt
//
LOCUS       DATILV010000887         4254 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_990212, whole genome shotgun sequence.
ACCESSION   DATILV010000887 DATILV010000000
VERSION     DATILV010000887.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4254
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_990212"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1155
                     /locus_tag="VLJ17_21465"
     CDS             <1..1155
                     /locus_tag="VLJ17_21465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HSV25582.1"
                     /translation="FGGELGTSMNFTSLKRTTASFDAISADASNFGFCNVNSADPAQK
                     TPANCLLRGVPGQYSRMSAEAHWKYQYIDHFGQVFTPFVGVRGDAAAMAISNEPGVTN
                     FINSGDSTVTRAMPTVGLEYRYPFIGIQGWGTQTIEPIAQLIVRPNEPLIGKLPNEDA
                     QSLVFDDTNLFKVDKFSGWDRIEGGGRANAGLQYTAQFNRGGNVNVLFGQSYQLFGLN
                     SFAAGDITNTGLGSGLDKTRSDYVARMAFQPNQLYTFTSRFRFDQADFTLQRMEIEAR
                     ANFDRWNAAVLYGDYAAQPQLGFLTRRDGILTSGAYKVSENWVVNGGVRYDIQNGKLS
                     QTRLGLGYIDDCFIMSFQYFTDYTFSGNVTSSQTYLLQVSLRTIGGSGFQ"
     gene            1311..2252
                     /locus_tag="VLJ17_21470"
     CDS             1311..2252
                     /locus_tag="VLJ17_21470"
                     /inference="COORDINATES: protein motif:HMM:NF020872.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HSV25583.1"
                     /translation="MTSHWRGMISGQGRIIIVTACVIATLLAPSRALAQHVVLVVNGE
                     VITDYDVEQRTKFNTMTTHKTPPRQDVIEELIDEKLKVQIGRRYKIEIADSDVDSSYA
                     DMAKRMHLSPDQLTQTLIQSGVDSKTLKARIRADTTWQYIIRGKFQSSLQINEKSVLD
                     EMETQKKSDGTKVGYEYTLRPILFVVPRGNSALQESRRKDAEALRARFTNCDSGLPFA
                     RSLRDVAIREPITKNSSDLAPALRDILDKTELGHLTAPETTSQGIELFALCEKKETKG
                     ETPEKREVREKMFSEQFQAKAKSYLRELRRQAMIERK"
     gene            2255..3274
                     /gene="pdxA"
                     /locus_tag="VLJ17_21475"
     CDS             2255..3274
                     /gene="pdxA"
                     /locus_tag="VLJ17_21475"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050570 - 4-hydroxythreonine-4-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0042823 - pyridoxal phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HSV25584.1"
                     /translation="MPQSIALTFGEPAGIGPDLTIALWRQRVALDLPSFYVIADRKFL
                     ARRAKLTGAPIPLEASEPREAAAIFPSALPVVDVGVTATAAPGLPDATSAPAAIASIR
                     LGVRHVLGGEAAAVVTNPIAKNVLYRSGFTEPGHTEYLARLTAEATGRPMRPVMMLWS
                     PQLAVVPVTIHLPLAQVPEALDTDLIVETGQITAHDLTNRFRIANPRIAIAGLNPHAG
                     EDGAIGAEDHATVRPAVDKLKRLGIAARGPLPADTMFHPAARATYDAALCMYHDQALI
                     PIKTLAFDHAVNVTLGLPFVRTSPDHGTAFDIAGTDRADPSSLIAALRLAARLAVRKE
                     IAVAP"
     gene            3271..4230
                     /locus_tag="VLJ17_21480"
     CDS             3271..4230
                     /locus_tag="VLJ17_21480"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020184921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA adenine dimethyltransferase family protein"
                     /protein_id="HSV25585.1"
                     /translation="MTAIDDLPPLREAIRRHGLSAKRSLGQNFLLDLNLTARVARAGG
                     PLDGVTVVEIGPGPGGLTRALIAQGARRVIAIERDDRAIAVLGEIAAHCPGRLTVIEG
                     DALEIDWRLAPVPPSSAVGSQGRGTAAPHSPPSPQGGGEEKNRSRIIANLPYNIATAL
                     LVRWLGIEPWPPWYDSLVLMFQREVAERIVASPGSKQYGRLAVLTGWRTQARIMFDVA
                     PSAFVPPPKVTSSVVWLVPRAAPLPCSRTTLERVTAAAFGQRRKMLRQSLRALGRHPQ
                     PILEAAGINPTTRAEEISVDGFVALANAFDAGRGEAGLSSARS"
BASE COUNT          833 a         1362 c         1270 g          789 t
ORIGIN      
        1 tttggcggcg agttgggcac cagcatgaat ttcaccagcc tcaagcgcac gacggcaagc
       61 ttcgacgcga tcagcgccga cgcatcgaac ttcggctttt gtaacgtcaa ctccgcggac
      121 cctgcacaga agaccccggc aaactgcctc ctgcgcggcg ttccgggcca atattcgcgc
      181 atgtcggcgg aggcgcattg gaaatatcag tacatcgatc acttcggtca ggtgtttaca
      241 cccttcgttg gggtgcgtgg cgacgccgcc gcgatggcga tcagcaatga gccgggcgtc
      301 accaatttca tcaactccgg cgactcgacc gtcacccgtg caatgccgac agtcggactc
      361 gagtaccgtt atccctttat cggaatccag ggctggggca cccagaccat cgagccgatc
      421 gcgcagctga tcgtccggcc gaacgaaccc ttgatcggca agctgccgaa cgaggatgcc
      481 cagagcctcg tgttcgatga taccaacctg ttcaaggtgg acaaattttc cggttgggac
      541 cgcatcgaag gcggcggtcg cgccaatgcg ggcctgcaat acaccgcaca gttcaatcgc
      601 ggcggcaatg tcaacgttct gttcggtcaa tcttatcagc tgttcgggct caactccttt
      661 gcggccggcg acatcaccaa tacgggcctg ggtagtggcc tcgacaagac ccgctccgac
      721 tacgtggcgc gcatggcatt ccagccgaac cagctttaca cgttcacgtc gcggttccgc
      781 ttcgaccaag cggacttcac gctgcaacgt atggaaatcg aggcccgtgc caacttcgac
      841 cgctggaacg ccgcagtcct ttacggtgat tacgcggcgc agccccagct cggatttcta
      901 acgcggcgtg acggcatcct caccagcggt gcctataagg tcagcgaaaa ctgggtcgtg
      961 aatggcgggg tcaggtacga catccagaat ggaaagctgt ctcagacacg ccttggcctc
     1021 ggctatatcg acgattgttt catcatgtca ttccagtact tcacggatta cactttcagc
     1081 ggcaatgtga cgtcaagtca gacctacttg ctgcaggtca gcttgcgcac cattggcgga
     1141 agcggattcc agtgaggaac ggcgccgcgc ggcgccacct gttggcctga tgcagcggct
     1201 ggtggattcg ctacgttttg acgcctgtcc gtcgggcgca gccgtgaagt acaatgccac
     1261 agccaagtat caattacgtt ttcgacgcag aattgataaa ggaggtaaag ttgacctcgc
     1321 actggcgcgg aatgataagc gggcaaggcc gcatcatcat tgtgacggcc tgcgtcatcg
     1381 ccactttgtt agcaccgtcg cgggcccttg cccaacacgt cgtccttgtc gtcaatggcg
     1441 aagtcatcac cgactacgac gtcgagcagc gcacgaaatt caatacgatg accacccaca
     1501 agacaccgcc acggcaggac gtaatcgagg agttgatcga cgaaaagctt aaggttcaga
     1561 tcggacgccg ctacaagatc gagattgccg acagcgacgt cgattcgagc tatgctgaca
     1621 tggcaaagcg catgcatctg agccccgacc agcttaccca gacgctgatc cagagcggcg
     1681 tcgattccaa gacactcaag gcgcgcattc gggctgacac cacctggcaa tatatcatcc
     1741 gcggcaagtt tcaatcgagc ctgcagatca acgagaagag cgtgcttgac gaaatggaga
     1801 ctcagaagaa gagtgacggt acgaaggtcg gttacgagta tacgctgcgg ccgatcttgt
     1861 tcgtggtgcc gcgcggcaat tcggcgctgc aggaatcgcg ccgcaaagat gccgaggcgc
     1921 tacgcgcccg tttcaccaac tgcgattccg ggctaccctt tgcgcgctcg ctgcgcgatg
     1981 ttgcaatccg cgaaccgatc accaagaatt cctctgacct tgcgcccgcg ttgcgcgaca
     2041 ttctcgacaa gaccgaactt gggcacctga ccgcgccgga aacgacctcg cagggcatcg
     2101 agctgttcgc cttatgcgaa aaaaaagaaa ccaagggaga aacacctgag aagcgcgagg
     2161 tgcgcgagaa gatgttcagc gagcagttcc aggccaaggc caaaagctat cttcgtgagc
     2221 tgcgccgcca ggcgatgatc gaacgcaagt agcgatgccg cagtcgatcg cgctgacttt
     2281 cggcgagccg gcgggaatcg gccctgacct aaccattgcg ctgtggcgac agcgcgtcgc
     2341 gctcgacctg ccgtcattct acgtcattgc cgatcgcaag ttcttggcgc ggcgcgccaa
     2401 gttgaccggt gcgccgattc cgcttgaggc gagcgaaccg cgcgaagcag ccgcaatatt
     2461 tccctccgca ttgccggtcg tcgatgtcgg cgtgaccgcg acggccgcgc ctggccttcc
     2521 cgatgcaacg agtgcgcccg ccgcgatcgc ctcgattcgc ctcggcgtgc gccatgtgct
     2581 agggggcgag gctgctgcgg tcgttaccaa tccgatcgcc aagaacgtgc tctatcggtc
     2641 ggggtttact gagcccggcc acaccgaata cttggcgagg ctcaccgccg aggctaccgg
     2701 ccggccgatg cgacccgtaa tgatgctgtg gtcgccccaa ctcgcagtcg taccggtgac
     2761 gattcacctc ccgctggccc aagtgccaga agcgctcgac accgacctca tcgtcgagac
     2821 cgggcaaatt acggcgcatg atctcacaaa ccgatttcgc atcgccaatc cgcgcatcgc
     2881 catagcggga ctcaatccgc acgctggcga ggacggcgcc atcggagccg aggaccacgc
     2941 caccgtgcgg cctgctgtgg acaagctcaa acgcctcggc atcgcggcgc gcggaccgct
     3001 gccggccgac accatgttcc acccggccgc acgcgctacc tacgacgcag cgctgtgcat
     3061 gtatcacgac caggcgttaa ttcccatcaa gacgctcgcc ttcgatcatg ccgtcaacgt
     3121 cacgctgggc ctgccgttcg tgcgcacctc gccggatcac ggcaccgcgt tcgacattgc
     3181 cggcaccgac agggctgatc cgtcaagcct gattgcggca ttgcggcttg ctgccaggct
     3241 tgctgtgcgc aaggaaattg cagtcgcccc atgacggcga tcgacgatct gcctccgctg
     3301 cgcgaggcga tccggcgcca tggcctgtcg gcgaagagat cgcttggcca gaatttcctg
     3361 ctcgacctca atctcacggc gcgcgttgcc cgcgctggcg gcccgctcga cggcgtcacg
     3421 gtggtggaga tcggcccggg gccaggcggc ctcacccgcg ctctcattgc gcaaggcgcg
     3481 cgacgagtga ttgcgatcga gcgcgacgac cgcgctatcg cggtgctcgg tgagatcgcg
     3541 gcgcattgcc ctgggaggct gacggtgatt gagggcgacg cgctggaaat cgactggcga
     3601 cttgctcctg tacctccctc ttctgctgtg gggtcgcaag gtcgcggcac agcggcgcct
     3661 cattccccgc cctccccaca agggggaggt gaggagaaaa ataggtcacg cattatcgcc
     3721 aaccttccct acaacatcgc gaccgcgctt ttggtgcgct ggctcggcat cgagccatgg
     3781 ccgccgtggt atgattcgtt ggtcctgatg tttcagcgcg aggtcgccga gcgcattgtg
     3841 gcttcccccg ggtcgaagca atacggccgc cttgcggtgc ttacgggatg gcggacgcag
     3901 gcccgaatca tgttcgatgt cgcgccgtcg gccttcgtgc cgccgcccaa ggtcacatcg
     3961 tcggtggtgt ggcttgtccc tcgtgctgct cccctgccct gctcccgcac aacgctggaa
     4021 cgcgtcaccg ccgccgcctt tgggcaacgc cgcaagatgc tccggcagag cctgcgcgcg
     4081 ctcgggcgcc acccgcagcc gatcctggaa gctgcgggca tcaatccgac aacgcgcgcc
     4141 gaagaaattt cggtggacgg gttcgtggcg ctcgccaacg cgttcgacgc tggccgcggt
     4201 gaagcgggac tgagttctgc gaggtcatag atgttgacgc aactgcgccg ccaa
//
LOCUS       DATILV010000888         3286 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2521087, whole genome shotgun sequence.
ACCESSION   DATILV010000888 DATILV010000000
VERSION     DATILV010000888.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3286
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2521087"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(97..2724)
                     /locus_tag="VLJ17_21485"
     CDS             complement(97..2724)
                     /locus_tag="VLJ17_21485"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSV25586.1"
                     /translation="MFDWWRQGLPMRGYMALIVISILVPVLLFAVILFSRYYHSEIVR
                     IDEELKNDARELALTIDRDLQGQLYTLQAMSIAQLIRNRNFEAFYRQASKVREFTGLD
                     ILLRDRTNQQLINTRVPWGTPLPVEIVPGDDQVIATKKPYISGVFVGAVARRPLYTIT
                     APVLEDDIVAYFLQLSLELQRLVDLLNATILPDRIAGIIDGNHMFMARTRNFDEFVGR
                     RAPDSFIEQLESSEGYWRGTNAEGELVRAGFARSKLAGWWVWVSIPERVVQGSVRQAL
                     WTSGVLGVALTILAIFVASLVSGNLVNAIHSLSAQADALGRGESTPSPNLLLRELNVV
                     SQQLVAASAQRKTLEAELVNRATRESEQRFQILVQGVTDYAIYMLDPQGHITNWNPGA
                     ARIKGYTEQEVLGKHFSIFYTDEDRKEDLPTRALRTATTAGKYEAEGWRLRKGGHRFW
                     ANVVIDPIYDSEGMLIGFAKITRDITEKREAQRQLDAARDQLHQSQKLDAVGQLTGGV
                     AHDFNNLLTIIIGNLDAAKRTLESMKTGAQARLARAVDQALIGALRASTLTAHLLAFA
                     RRQPLEMKPLDVNKLLDHTSEFLRPALGEKVQLEVLGTGDVWQIEADRAQLETAIVNL
                     ALNGRDAMPDGGKVTIEASNVFLDEDYCSKFAEVRPGQYVQLSVSDRGEGMTKEILDR
                     VFEPFFTTKQPGEGTGLGLSQVYGFVKQSGGHVRICSEPDNGTTVNIYLPRSHARADE
                     HEAHRTTSLSVSGNETILVVEDDENVRVFVSETLRELKYKVIEARNSTSALKALEDHV
                     NVDLLLTDVILPGQNGRELAQVVRSKRPGIKVLFMTGYSRDAIVHQGRLDHGVDLIQK
                     PLTQASLATKIRDVLDRHR"
     gene            complement(2847..>3286)
                     /locus_tag="VLJ17_21490"
     CDS             complement(2847..>3286)
                     /locus_tag="VLJ17_21490"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV25587.1"
                     /translation="LFGKGVETGNDIQEGTVPDGHQKETVLVVEDNPGVREYSAEILR
                     DLGYTIIEAEDGPAALRQIERNEAVDLLFTDIGLPGMNGRELAEEALRRRPKLKVLYT
                     TAYAKNAVVHHGRLDPGVQLIPKPFTHADLATKIRTVMDSNDK"
BASE COUNT          708 a          925 c          900 g          753 t
ORIGIN      
        1 ggcgggtcaa atctgcaaat tgccaagtcg tgcggcagtc cctctctttc atcttcccaa
       61 tcattgagca aggcgcgccc tatcggaacg acgcggttat cgatgcctat ccaaaacatc
      121 tcgaattttg gttgccaagg acgcctgtgt cagtggcttt tgaatcagat cgacgccgtg
      181 atcgagacgg ccttggtgca caattgcatc gcgggaatat ccggtcatga acaggacctt
      241 gataccgggg cgtttgctgc gcacgacctg tgcgagttcg cgtccgtttt gtccaggcaa
      301 aatcacgtcg gtgagcagaa gatcaacatt gacgtggtcc tcaagcgctt ttagggccga
      361 cgtagagttg cgcgcttcaa tcaccttgta ctttagttcc cgcagtgtct cggacacgaa
      421 aacgcggacg ttttcatcat cttcgacaac caatatggtt tcgttgccag agacggacaa
      481 cgatgtcgtg cgatgcgctt cgtgttcatc ggccctggcg tgggaacgcg gcaaataaat
      541 gttgacggtg gtcccgttgt ccggctcgct gcagattctg acgtgaccac ccgattgctt
      601 gacgaatcca tagacttggc tcagtccaag gccggtgccc tcgccgggct gcttggtcgt
      661 aaaaaacggc tcaaatacgc gatcgagtat ctctttggtc attccttcgc cgcggtcgga
      721 aaccgaaagc tggacatact gccccggtct cacctcagcg aatttggaac agtagtcttc
      781 atcgagaaaa acattgctcg cctcgatcgt caccttaccg ccatcgggca tcgcatcgcg
      841 gccgttgagc gcaagattta cgatagctgt ctcgagttgc gcacgatcgg cctcaatttg
      901 ccagacgtct cccgtaccga ggacttcaag ctgaaccttc tcgccaagcg cgggcctcag
      961 gaattccgac gtatgatcga gcaacttgtt gacatcgagc ggcttcatct caagcggttg
     1021 acggcgggcg aatgcgagca aatgcgcggt caacgtcgac gctcgcagcg cgccgataag
     1081 cgcttgatcg acggcgcgcg cgagacgtgc ctgtgcgcca gttttcatgg attcgagggt
     1141 tcgcttagcg gcatccagat tgccaatgat aatcgtcaat aggttattga aatcatgagc
     1201 aaccccgccc gtcagctgtc ccacagcatc caacttctgc gattgatgca attgatctcg
     1261 tgccgcatcg agctgccttt gcgcctcacg cttttcagta atgtcgcgtg tgatcttggc
     1321 aaatccgata agcattcctt ccgaatcata gatagggtcg atcacgacat tggcccaaaa
     1381 gcgatgcccc ccctttcgta gccgccagcc ctcggcttcg tatttgcccg cggtcgtggc
     1441 ggttcgaagc gcgcgcgtcg gaagatcctc ttttcgatct tcgtcggtat aaaatatgga
     1501 aaagtgcttc ccgagaactt cctgttcagt gtagcccttg atacgggccg cgcccggatt
     1561 ccagttcgtg atgtgacctt gcggatcgag catgtagatc gcgtagtcgg taacaccttg
     1621 cacaagaatc tggaagcgct gttcgctttc gcgtgtggct cgattgacaa gttccgcttc
     1681 cagagttttc cgttgggcac ttgcggcgac aagctgttga ctgaccacat tgagctcacg
     1741 aagcagcaag ttcgggctgg gagtcgattc accacgacca agcgcatcgg cctgtgcgct
     1801 taacgagtgg attgcattga ccagattgcc actaacaagg gaagcaacaa agatcgcgag
     1861 aattgtgagc gccacgccga gcacgcctga tgtccaaagt gcctgacgta cggacccttg
     1921 gacgacacgt tccggaatac tgacccagac ccaccagccg gcgagtttcg agcgcgcaaa
     1981 tccggcgcga accaactcgc cctcggcgtt ggtcccgcgc cagtatccct cggaactctc
     2041 taattgttcg atgaaactgt ccggtgcgcg tctgccgacg aactcgtcga agtttcgcgt
     2101 acgcgccatg aacatgtgat tgccatcaat gattccggcg atgcggtcgg gcaagatggt
     2161 tgcattgaga agatcgacca gacgctgaag ctcgaggctc agttgaagga aatatgcaac
     2221 gatatcatcc tccaatacgg gagctgtaat cgtgtacagc ggccgccgtg caacggcgcc
     2281 gacaaaaacg ccgctgatgt atggcttttt tgtcgcaatg acttggtcat cccctgggac
     2341 aatttcgacg ggcagcggtg tgccccaagg cacgcgggtg tttatgagtt gctgattggt
     2401 ccggtcgcgc agcagaatat ccaggccggt gaattcacgc accttcgatg cctgccgata
     2461 aaaggcctca aaattcctat tcctaatcag ttgagcaatt gacatcgcct gcagcgtgta
     2521 gagttgtccc tgaagatcgc gatcgatggt gagcgcgagt tcacgcgcgt cgttcttgag
     2581 ttcttcatca atgcggacga tctcgctgtg atagtaacgc gaaaacagaa ttaccgcgaa
     2641 cagcaagact ggaaccaaaa tcgaaatgac gatcagagcc atgtagcccc gcatgggaag
     2701 gccctgtcgc caccagtcaa acaccttcga cctccagcag caaacatgtt cgcggacggc
     2761 cagcaccgcc ggtaagggtc aacaacggac attggagcat ggcgacgggg ggcctgccga
     2821 gtccaaaaag gacgcagcgt tggtgcctat ttgtcgttgc tgtccatcac tgtacgtatc
     2881 ttggtagcga gatccgcgtg ggtgaatggt ttcgggataa gctgcacgcc aggatcaaga
     2941 cggccatgat gaacgacagc atttttggca tatgctgtcg tgtaaaggac cttgagcttg
     3001 gggcggcggc gtagcgcctc ttctgcaagc tcgcggccgt tcatgccggg caggccgatg
     3061 tcggtgaaca acagatcgac cgcctcgttt cgctcgatct gccgcagcgc cgccgggccg
     3121 tcttccgctt cgataatggt gtatcctaga tcgcgtagaa tctccgcact gtattctcga
     3181 acaccggggt tatcctcaac aacgagcacc gtctcttttt ggtgcccgtc tggcactgtt
     3241 ccctcctgga tatcgttgcc tgtttcgacg ccctttccaa acagtc
//
LOCUS       DATILV010000889        12567 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_990768, whole genome shotgun sequence.
ACCESSION   DATILV010000889 DATILV010000000
VERSION     DATILV010000889.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 12567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12567
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_990768"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..815
                     /locus_tag="VLJ17_21495"
     CDS             <1..815
                     /locus_tag="VLJ17_21495"
                     /inference="COORDINATES: protein motif:HMM:NF024896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSV25588.1"
                     /translation="WTGKLWALSQGTTVASALDHAVEYFLLSDADIVYAPEMLRWLVA
                     HSVSREALLTSFMVKLRCDSAAERFLVPAFIFFFQMLYPFSWVNREGRSTAAAAGGCM
                     LVRADTLRNIGGIEAIRDSLIDDCALARKFKAKGPIWLCLTQRVTSIRNYPRWADIAQ
                     MVSRSAYAQLGYSPTRLAGAVAALVLTFVIPPLAALVGSGYARLFGLGAWAMMALLFL
                     PTLRIYRISPLCGVTLPAVAFAYLLFTLDSAFQSMRGKGGFWKGRFQATRVK"
     gene            812..1690
                     /gene="hpnC"
                     /locus_tag="VLJ17_21500"
     CDS             812..1690
                     /gene="hpnC"
                     /locus_tag="VLJ17_21500"
                     /EC_number="2.5.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004311 - farnesyltranstransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="squalene synthase HpnC"
                     /protein_id="HSV25589.1"
                     /translation="MTSAAELRSGKGHRDENFPVASLLISAKHREPILAFYEFVRTAD
                     DIADHPTLDPSEKLAHLDELEAGLLGSIEGEDVAQRLRVSLEGRQLSTRHAQDLLAAF
                     RMDVTKLRYRTWDELIEYCRYSAMPVGRFVLDVHGEPRSTWPASDALCAALQINNHIQ
                     DCRADYLALDRVYVPLDALVDAGARVEELGAQRSSPALLRCLNGLAHRTDALLRESRG
                     FAEMIGDFRLSLEVAVITTLARRILRLIKTRDPLSENVHLSKIGVMGGTLAGVAAGSL
                     ARFVRGTVAARRSKDA"
     gene            1687..2529
                     /gene="hpnD"
                     /locus_tag="VLJ17_21505"
     CDS             1687..2529
                     /gene="hpnD"
                     /locus_tag="VLJ17_21505"
                     /EC_number="2.5.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016767 - geranylgeranyl-diphosphate
                     geranylgeranyltransferase activity [Evidence IEA];
                     GO_process: GO:0016117 - carotenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="presqualene diphosphate synthase HpnD"
                     /protein_id="HSV25590.1"
                     /translation="MSTRVTQPDNTTNAGRASGSSFYTAMRILPKAQRDAMFALYGFC
                     RQVDDVADSPEPQDRRFAELAAWRVDIKALYCGSPTARTRDLAKAVRDYDLDQADFLA
                     VIDGMEMDVAADIRAPAWPELDLYCDRVASAVGRLSVKIFGLETKPGPQLAHHLGRAL
                     QLTNILRDLDEDAEVGRLYLPQEALVEAGIESNDPSVVLASPRLDRACAQIIDAARNH
                     FDKADEIMSFASRRTVRAPRIMGEVYRLMLESMATRGFAPPRCPIRLSRLRLVWIIMR
                     YAFI"
     gene            2529..3773
                     /gene="hpnE"
                     /locus_tag="VLJ17_21510"
     CDS             2529..3773
                     /gene="hpnE"
                     /locus_tag="VLJ17_21510"
                     /EC_number="1.17.8.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxysqualene dehydroxylase HpnE"
                     /protein_id="HSV25591.1"
                     /translation="MAQIVHIIGAGLAGLAAAVALASRGVATVIHEATDQAGGRCRSY
                     DDATSGMRIDNGTHILLSGNTAALDFVASIGATKLLTAFPSARFPFVDLISKQRWTLD
                     LGSGRLPSWVFDRNRRAPGTRMLDYLSLAPIMWPASDQPLRDVVSCSGPAYQQVMRPF
                     LLAALNIDPSESSSALARAVVRETIARGGSACQPYLAPQGLSVAFVEPAIAYLNRHAG
                     AIRFGKQLRRFVIVAETVAGLDFSDSVIAVGPNDAVVLAVPPYAARAIIPQLKAPDEF
                     RAIINAHFRIVPPPSLEPMIGVLNGAAEWIFAFEDRICVTISGADRLLQHGRDELAKM
                     IWQDVRRVADVPPELPPWQIVRERRATFAATPSQNAKRPGVRTAWRNLALAGDWTDTG
                     LPATIESAVRSGTRAADLVLQS"
     gene            3868..5841
                     /gene="shc"
                     /locus_tag="VLJ17_21515"
     CDS             3868..5841
                     /gene="shc"
                     /locus_tag="VLJ17_21515"
                     /EC_number="5.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051007 - squalene-hopene cyclase activity
                     [Evidence IEA];
                     GO_process: GO:0019746 - hopanoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="squalene--hopene cyclase"
                     /protein_id="HSV25592.1"
                     /translation="MQHEAQSLFPASAIDRPALDSAITAATQALLDCQRSDGHWVFEL
                     EADSTIPAEYVLLKHYLDEPLDPALEQKFAAYLRRQQGPHGGWPLFHEGDFDMSATVK
                     AYFALKMIGDSADAPHMVRAREAVLVRGGARQTNVFTRFLLSLYGVLAWNSVPVMPVE
                     IMLLPRWFPFHLTKISYWGRTVIVPLLVLQALKPRAKNRRGVTIDELFVENPRDIGPP
                     EKAPHQNAVLFVLFRFIDIILRAIEPWFPHSLRRRAIARAVDFVTKRLNGEDGLGAIY
                     PAMANSVMMFDVLGYPKDHPHAALARTAVDKLVVVNDCEAYCQPCVSPVWDTSLACHA
                     LLEAGDAAASASVRRGLRWLLPKQVLDVKGDWTARRPNVRPGGWAFQYANPHYPDLDD
                     TAVVAMALDRMRRRQPTREYETAIARAREWIEGLLSRNGAWGAFDADNTYYYLNNIPF
                     ADHGALLDPPTEDVTARCVSMLAQLGDRPETNTKLRAAIDYLRDTQLQDGSWYGRWGM
                     NYIYGTWSVLCALNAVGLDPESDVVRNAADWLVAIQNPDGGWGEDGTSYKLGYRGYER
                     APSTASQTAWALLGLMAAGRANHSAVARGIAYLASAQINDGLWSEPRFTATGFPRVFY
                     LRYHGYRKYFPLWALARYRNLMSGNSRAVAFGM"
     gene            6006..6731
                     /locus_tag="VLJ17_21520"
     CDS             6006..6731
                     /locus_tag="VLJ17_21520"
                     /inference="COORDINATES: protein motif:HMM:TIGR03468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphorylase"
                     /protein_id="HSV25593.1"
                     /translation="MNAPRFVAVTGLAFEARIVAGPGVTVVCGGGQIQLRRSLEAAIR
                     RGCHGILSFGIAGGLAPHLKPGSCVVARNIIAESGRYASDSGWAQSLIDMVRGATPRR
                     AALRDVSFGDIAGSDVPLASTHAKRRLHEKTGAVAVDMESHIAARIAVEHRVPFAAFR
                     VITDPSDRALPPAALVATNVDGGIDFQAIMRSLVRHPRQVPTLFRLALDSWAARQALI
                     PGRRFLGPNLGLPDMRQHLLDVA"
     gene            complement(6654..7796)
                     /gene="hpnH"
                     /locus_tag="VLJ17_21525"
     CDS             complement(6654..7796)
                     /gene="hpnH"
                     /locus_tag="VLJ17_21525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosyl-hopene transferase HpnH"
                     /protein_id="HSV25594.1"
                     /translation="MKIPFFKEMKIGAYLLRQKLLGRKRYPLVLMLEPLFRCNLACIG
                     CGKIDYPDPILNRRLSVEECLAAVDECGAPMVAIPGGEPLIHKDIGAIVKGIVARKKF
                     VSLCTNALLLEKKLDQFEPSPYLFFSIHLDGLREHHDKSVSQSGVFDRAVSALRAAKA
                     RGFAVNVNATIFDGHSAEDIAAFLDFAKTLDVGVSISPGYAYERAPDQEHFLSRRKTK
                     ELFRRVFALGKGKGWSLMHSGLFLDFLAGNQSYHCSPWGMPTRNIFGWQKPCYLLGEG
                     YVSSFAELMETTDWEAYGTGRYEKCANCMAHCGYEPTAAAATLAHPIEALRVAMFGVR
                     TEGAMAPEISLARQRPAQYVFSRHVQKMLAHIGEPKVRAKEAATRN"
     gene            8262..10853
                     /locus_tag="VLJ17_21530"
     CDS             8262..10853
                     /locus_tag="VLJ17_21530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HSV25595.1"
                     /translation="MVRAAIIAIIGFCTKYAYGTIAVALLIATVAGYYSAEHFAINTD
                     VNTLISEKLSWRQRELKFEKSIPQRYDNILVVIDAPTPELAALARAALANKLSDNKEL
                     FPSVTQLGGTPFFAQNGLLFRSKEEVGGMTRQLAAAAPLIRVPVVDPSLRGLSQMIVL
                     VLAGVREHELTLDDVARPFTTAAEALENVLAGRPATFSWHELMSGTPSTPSDLRRLID
                     VKPKLDFTVLEPGKEATDAIRAAAASLDLASRFQARVRLTGPVPIANEEFATVKDGAL
                     INGLVTLVLVLLILWLALRSFRIILAVAVALFIGLSITAMVGLMLVGSLNLISIAFAV
                     LFIGLGVDFGIQFSVRYRQERFKRPNLRTALLRAGARAGIPLTLAAAAVAAGFLSFLP
                     TAYRGVSELGEIAGAGMIIAYLTSITVLPALLHVFHPAGEPEGLGFAWLAPVDDFLEN
                     HRRPIITVTLGLAIAGLPLLYYLHFDFNPMNLRSPKVESMATYLDLRRDPSVGANSVN
                     VLVPSTAAADQTAQRLRALPEVDRVVTIADFIPTDQPEKLAMIADAAAVLNPVLRAPP
                     RPTPTDADNVEALRRGIDSLTKAAAEQAGPGADASLRLAGALSRLAVADQAVRKRTES
                     VFIMPIKNNLEDIRNLVLAKQVSLENLPPEIVDDWRSKDGDVRVEAVPKGNPDDNENI
                     RAFAKAVLAVEPNAIGGPISILESGDTIVRAFFEAGVWALGSIAILLWLALRRFGDVL
                     LTLVPLVLAGVVTLEICVLIGLQLNFANIIALPLLLGVGVAFKIYYILSWRAGRTKLL
                     QSSLTRAVIFSAATTATAFGSLWLSSHPGTSSMGKLLALSLCCTLAAAVLFQPALMGR
                     PRTIRNT"
     gene            complement(10803..11339)
                     /locus_tag="VLJ17_21535"
     CDS             complement(10803..11339)
                     /locus_tag="VLJ17_21535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009800069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2147 domain-containing protein"
                     /protein_id="HSV25596.1"
                     /translation="MRSILTIWTATFLLGGYAVAAEPTGEWRTANGLANIRIDDCDGV
                     LWGIISWEKEAGGVDLYNPDPAERNRPTLGLHILLAMKPTKPGVWQGEVYNAENGKTY
                     DSRISLTSPDVLKIEGCVLGFLCGGENWTRVKTAETASPPQRAPNTARPKQAPTPTLT
                     ACSGIPDGAGSAHKGGLK"
     gene            11576..>12567
                     /locus_tag="VLJ17_21540"
     CDS             11576..>12567
                     /locus_tag="VLJ17_21540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012386123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HSV25597.1"
                     /translation="MVRVLRTIGYDVGFCRGSGQYLFDREGNKYLDLLSGYGVFAIGR
                     NHPALREALNSVLDAHLPNLVQFDVSPLAGVLAKRLLEFVPHLDKVFFANSGTEASET
                     AIKFARCATGRPGIVYCEHAFHGLTNGSLSLNGDAIFRSGFEPLLPHCRVVPFNDLAA
                     LERALASRDIAAFIVEPIQGKGVNVPADDYLREAAALCRRHGTLFVADEIQTGLGRSG
                     RFLAVEHWGVEPDMVLLAKALSGGHVPVSAVLTRKRIYDKIFDRIDRAVVHGSTYAKN
                     DLAMAAGIATLEVMKHERLIARADRLGERLRLTFRRLFERYEFVREVRGKGLMIG"
BASE COUNT         2335 a         3760 c         3725 g         2747 t
ORIGIN      
        1 gatggaccgg caagctgtgg gcgctcagcc agggtacgac ggttgcctcg gctctcgacc
       61 atgccgtcga atattttctt ttgtccgatg ccgatattgt gtatgcgccc gagatgttgc
      121 gttggctcgt cgcccattcc gtctcccgtg aggctttgct tacttccttt atggtcaagc
      181 ttcgctgcga cagtgcggcg gaacgctttc tcgtaccggc gttcattttt ttcttccaga
      241 tgctgtaccc gttttcctgg gtcaatcgcg aaggccgctc aaccgcggca gccgcaggag
      301 gctgcatgct ggtgcgtgcc gacaccttac gcaacatcgg tggcatcgaa gcgatccgcg
      361 attcgctgat cgacgattgt gcactggccc gcaagttcaa ggccaaagga ccgatctggc
      421 tgtgcctgac ccaacgcgtc accagcatcc gcaactaccc tcgctgggcc gacatcgcac
      481 agatggtgtc acgttccgcc tacgcgcaac tcggctattc tcccacgcga ctcgccggcg
      541 ccgtggcggc tttggtgctc acctttgtga tcccgccgct cgcagcactc gtcggatcgg
      601 gatacgctcg cctgttcggg cttggtgcgt gggcgatgat ggcgctcctt ttcttgccaa
      661 cactgcgcat ttacaggatt tcgccgttgt gcggggtaac gctcccggcg gtggcgttcg
      721 catacctgct gttcactctt gattccgcat ttcaatcgat gcgcggaaaa ggaggttttt
      781 ggaaaggccg attccaggcc acgagggtga aatgaccagt gcagcagagt tacgatctgg
      841 caaaggccac agggacgaga attttccggt cgcatcgctg ttgatcagcg cgaagcatcg
      901 tgagcccatt cttgcctttt atgaattcgt ccggaccgct gacgatattg ccgatcatcc
      961 gacgcttgat cccagcgaaa agcttgccca tctcgatgaa ctcgaggccg gtcttctcgg
     1021 cagcattgag ggcgaggacg tggcgcagcg actacgtgtc tcgcttgagg gccggcaatt
     1081 gtcgacgcgt cacgctcagg atctgctcgc ggcgttccgg atggatgtca ccaagctgcg
     1141 ctaccgcacc tgggacgaac tcatcgaata ctgccgatat tcggcgatgc cggtgggacg
     1201 ttttgtgctc gacgttcatg gcgagccgcg gtcgacttgg cctgctagcg atgccttgtg
     1261 tgctgcactg cagatcaaca atcacatcca ggattgccgc gccgactatt tggctcttga
     1321 tcgcgtctac gtgccgctag acgcattggt ggacgccggc gcaagggtcg aggaactcgg
     1381 ggcgcagcga tcttcaccgg cgctgctgcg atgtttgaat ggtctcgcgc atcgcaccga
     1441 cgcattgcta cgggagagtc gcggttttgc tgagatgatc ggggatttcc ggctgtccct
     1501 cgaagtcgcc gtaatcacga ccctggcgcg gcggatattg cggctgatca agacccgtga
     1561 tccattgagc gaaaacgtgc atttgtccaa gatcggcgtt atgggaggca cgctggcggg
     1621 tgtggcggcg gggtcgctcg cccgcttcgt gcgaggcacc gttgcggcgc gcagatcaaa
     1681 ggatgcatga gtacccgtgt gacacaaccc gacaacacca ccaacgccgg tcgcgcatcc
     1741 ggcagctcgt tctatacggc gatgcggatt ctgccgaaag cgcagcgcga cgccatgttt
     1801 gcactctatg gcttttgtcg ccaggtcgac gatgttgcgg attcgccgga gccgcaagat
     1861 aggcgcttcg ctgagctcgc ggcatggcgc gtcgatatca aggcgctata ttgcgggtcc
     1921 cctacggcgc gcacccgcga tctcgccaag gcggtgcgcg actatgacct tgatcaggcc
     1981 gacttcctgg ctgttatcga cggcatggaa atggacgtgg ctgcggatat tcgagcgccc
     2041 gcgtggcccg agctcgacct ttattgcgac cgggtggcca gcgcggtcgg ccggctgtcg
     2101 gtgaaaatct ttggccttga gaccaagcca ggcccgcagc ttgcgcatca tttggggcgt
     2161 gcgctgcagc tcactaacat tttgcgcgat ctcgacgagg atgcggaggt cgggcgactc
     2221 tacttgccac aagaggcctt ggtcgaggcc ggcatcgaat ccaacgatcc gtccgtcgtc
     2281 ctggcaagcc cgaggctcga ccgcgcctgc gcacaaatca tcgacgccgc gcgcaaccac
     2341 ttcgacaagg ccgatgaaat catgtcgttt gcctcgcggc gaaccgtgcg ggcgccgcgc
     2401 atcatgggcg aagtttaccg gcttatgctg gagagcatgg caacgcgcgg gtttgcaccg
     2461 ccgcgttgcc cgattcggct cagccggctg cggctcgtct ggatcatcat gcggtatgcg
     2521 ttcatctgat ggcgcagatc gttcacatca tcggtgccgg gctggccggg ctggcagccg
     2581 cggtcgcgtt ggcctcgcgc ggcgtcgcga ccgtgatcca tgaggcaacc gaccaggccg
     2641 gtggccgctg ccggtcgtat gacgacgcga cgagcggcat gcgcatcgat aacggcaccc
     2701 atattttatt gtctggcaac acggcggcgc tcgactttgt ggcgagcatt ggggcaacca
     2761 aactgctcac cgctttcccg agcgcccggt ttccgttcgt ggaccttatc agcaagcagc
     2821 gatggacgct cgatcttggt tctggacgac tgccaagctg ggtgttcgat cgtaaccgcc
     2881 gggcacccgg cacgcgaatg ctcgattacc tttcgttggc gcccatcatg tggccggcct
     2941 cagaccaacc gctccgcgac gtcgtgtcct gcagcggccc cgcttatcag caggtcatgc
     3001 ggccgtttct gctcgcggcg ctcaatatag accccagcga atcatcgtca gcgctggcac
     3061 gcgcagtggt gcgggaaacg atcgcacggg gcggatcggc ctgccaaccc tatctggcgc
     3121 cgcaggggct cagcgtagcc ttcgtggagc cggcgattgc atacttgaac cgccatgcgg
     3181 gagcaattcg gtttggcaaa cagctgcgcc gattcgtcat tgtggcggag actgttgcgg
     3241 ggctcgactt tagcgacagc gtcattgcgg tcgggccgaa cgacgccgtc gtccttgctg
     3301 tgccgcctta tgcggcgcgt gcgatcatcc cgcaactcaa ggcgccagac gagtttcgtg
     3361 ccatcatcaa cgcgcacttc cgcatcgtgc cgccgcccag tcttgagccg atgatcggtg
     3421 tattgaacgg cgctgccgag tggatcttcg ccttcgagga tcgcatatgc gtgaccatca
     3481 gcggagccga tcgattgcta cagcacggcc gcgacgagct ggcaaagatg atctggcagg
     3541 atgtgcgacg ggtcgcggat gttccgcccg aactgccgcc ctggcaaatc gtgcgcgagc
     3601 gacgagcaac ctttgcggca acgccgtcgc agaatgccaa gcgtcctggc gtaaggacgg
     3661 cgtggcgtaa ccttgcactt gctggcgatt ggaccgatac aggcctgcca gctacgattg
     3721 aaagcgcggt gcgctccgga acccgggcgg ccgatcttgt cttgcagtcg taaagagttc
     3781 atatccaagc atctgccttc cgacaccttc caaacatcca ggccttccaa acatccaggc
     3841 cttccaacat cgagcgttcc acacgacatg cagcacgaag cgcaatccct atttcccgca
     3901 tccgccatcg accgcccggc gcttgacagc gccatcacgg cggcgacgca agccctgctc
     3961 gactgtcaac gcagcgacgg tcattgggtc ttcgaattgg aggccgactc cacgatcccg
     4021 gcggaatatg tgctgctcaa gcattatctc gatgaacctc tcgacccggc gctggaacag
     4081 aaattcgccg cctatctgcg ccgccaacag ggcccccatg gcggctggcc gctgtttcat
     4141 gaaggtgatt tcgatatgag cgcgaccgtg aaggcgtatt tcgcactgaa gatgattggg
     4201 gactctgcag acgcgcccca catggtgcga gcgcgcgagg ccgtcctcgt acgcggtggc
     4261 gccaggcaaa cgaatgtatt cacccgcttc ttattgtcgc tctatggggt attggcatgg
     4321 aacagcgttc ccgtcatgcc ggtcgagatc atgctgttac cgcgttggtt tccatttcat
     4381 ctgaccaaga tttcctattg gggacgcacc gtcatcgtac cgcttctcgt cctgcaagcc
     4441 ctcaagccgc gcgccaagaa tcgacgcgga gtaacaatcg atgagttgtt tgtagagaac
     4501 ccacgcgata tcgggccgcc cgaaaaggct cctcaccaga atgcagtctt gttcgtgttg
     4561 ttccgcttca tcgatataat tctgcgcgcc atcgagccct ggtttccgca ttcgctgcga
     4621 cggcgcgcca ttgcgcgcgc ggtcgacttc gtcaccaaac gactcaatgg cgaagatggc
     4681 ttgggcgcca tttacccggc catggccaac agcgtgatga tgttcgacgt tctcggttat
     4741 ccgaaggacc acccgcatgc cgcgctcgcg cgcacggcag tcgataagct tgtggtggtc
     4801 aatgactgcg aggcctactg ccagccttgc gtctcgcctg tgtgggatac ctcacttgcc
     4861 tgtcacgcct tattggaagc gggagatgcc gctgcatccg caagcgttcg ccgcggcttg
     4921 cgatggttgc tgccgaaaca agtcctcgat gtaaagggcg attggacggc gcggcgtccc
     4981 aatgttcgac ccggcggctg ggcctttcaa tatgccaatc cgcactatcc cgatctcgac
     5041 gataccgccg tggtggcgat ggcgttggat cgcatgcgca ggcggcagcc cacccgggaa
     5101 tacgaaaccg cgatagcgcg ggcacgcgaa tggatcgagg gcttactgag ccgcaatggc
     5161 gcctggggag cattcgatgc cgacaacacc tactactatc tcaacaacat tccgttcgcg
     5221 gatcacggcg cgctgctcga tccgccgacc gaagatgtaa cggcacgctg tgtttccatg
     5281 ttggcccaac ttggtgaccg accggagact aacaccaagt tgcgtgctgc gatcgattat
     5341 ctgcgcgata cccagcttca agatggcagc tggtatggac gctggggcat gaattacatt
     5401 tacggcactt ggtccgtgct gtgcgcgctc aatgcggtcg gcctcgatcc ggaatccgac
     5461 gtcgtgcgca acgcagccga ttggttggtc gcgattcaga atccggacgg aggatggggc
     5521 gaagacggaa caagctacaa gcttgggtac cgtggctatg aacgtgcgcc cagcactgct
     5581 tcccagaccg catgggcgct actcggcctc atggcagcag gccgggccaa tcactcggct
     5641 gtcgcccgcg gtatcgccta tctggccagt gcgcagatca acgatgggtt gtggagcgaa
     5701 ccgcgtttca cggcgaccgg attcccgcgc gtattctatc tgcgctacca cggttaccgg
     5761 aaatactttc ctttatgggc tctggcccgc tatcgaaacc tgatgtctgg caacagccgt
     5821 gctgtcgctt tcggcatgtg acgcaaaagc cacgcttgtt aaccaattga taactaacct
     5881 tgaactctcg caagctacgt gcttacgttg caccaggcgc ggcgatcagg ggtgcgggct
     5941 tcccgtttcc cttgggggat tttgggttcg gggctgattt acctcagggg gcttcattgg
     6001 gtggtatgaa cgcgccgcgt tttgtggctg tgacaggcct cgcgttcgaa gcgcgcatcg
     6061 tggccggtcc gggagtgacc gttgtttgcg gcggcggtca gatacaactc cggcgatctc
     6121 ttgaagccgc aatccgcaga ggttgccatg gcattttgag ctttggcatt gccggagggt
     6181 tagcgccgca tctcaagcca ggttcgtgcg ttgttgcgcg caacatcata gcggaaagcg
     6241 gtcgctatgc gagtgatagc ggctgggcgc aatcattgat tgacatggtt cggggggcga
     6301 cgccacggcg cgcggcgttg cgggacgttt catttggcga catcgcggga tcagacgtac
     6361 ctcttgcttc cactcatgca aagcggaggc ttcacgaaaa gacgggtgcg gttgcggtcg
     6421 acatggaatc tcatattgcg gcgcgcatcg cggtcgaaca tcgggttccg tttgcggcat
     6481 tccgggtcat caccgatccg tcggatcggg cgttaccgcc ggcggcgctg gtagcaacga
     6541 atgtcgatgg cgggatcgac tttcaggcca tcatgcgatc gcttgtgcgg cacccgaggc
     6601 aggtgccgac gctgttccgc ctcgccctcg acagttgggc ggcgcgacag gcgctaattc
     6661 ctggtcgccg cttccttggc ccgaaccttg ggctccccga tatgcgccag catcttctgg
     6721 acgtggcgtg agaacacgta ctgcgctggg cgttgccgcg cgagcgatat ttccggtgcc
     6781 atcgcgcctt ctgttcgtac tccgaacatt gcaacccgca gcgcttcgat tgggtgcgcc
     6841 aaggtagcgg ctgctgcggt cggctcatat ccgcaatggg ccatgcagtt cgcgcatttt
     6901 tcataacggc cggtgccata ggcttcccag tccgtcgttt ccatcaattc tgcaaaggag
     6961 ctcacatagc cttcgccgag caggtagcaa ggcttctgcc agccgaaaat atttcgcgtc
     7021 ggcatgcccc aaggcgagca gtggtacgat tggttgccag cgagaaaatc gaggaacagg
     7081 ccggaatgca ttaggctcca acccttgcct ttgcctaacg cgaagacccg gcggaataac
     7141 tccttggttt tgcgccggct gagaaaatgt tcctggtcgg gtgcccgctc atacgcatag
     7201 ccaggcgata tggagacgcc gacatccagc gtcttggcga agtccagaaa cgccgcgata
     7261 tcctctgccg agtgcccatc gaatatggtg gcattcacgt tgacggcgaa gccgcgcgcc
     7321 ttggcggccc ggagcgccga tacggcgcga tcgaatacgc cggattggga caccgattta
     7381 tcatggtgtt ccctgagccc atcgagatgg atcgaaaaga acaggtaagg tgacggttca
     7441 aactgatcga gctttttctc caagagcaga gcgttggtgc acagcgacac gaatttcttg
     7501 cgcgccacga ttcccttgac gatggcgccg atatccttgt ggataagcgg ctctccgccc
     7561 ggaattgcca ccatcggggc cccgcattca tccaccgcgg ccaaacattc ttcgaccgaa
     7621 agtcggcggt tgaggatcgg atccgggtaa tcgatcttgc cgcagccgat gcaagcaaga
     7681 ttgcatcgaa acagcggttc caacataagc actaaagggt aacgtttgcg gccaagcaac
     7741 ttctgcctaa gcaggtaggc tccaatcttc atctccttga agaacggtat cttcattcct
     7801 ggctctttct tctcaaaaag gtactaacgt cctcgccggt gcgggaccgg caacgaaccc
     7861 aaccaccgcc gctgcggcgc cgattgcgcg gttgatctga tgaagcccct taccctgccc
     7921 ctgttcctag cacggattgc gattgcgggt gcaccatcaa ttcgaactat ccgtatacct
     7981 accgggttcc cgttcatggc taaactatgg ctaatacatg tgtgaacggc ggctggacaa
     8041 tgtgtcaagc ctgattgcga agctctgatt gcgaagcccc tctggtggat caagcccagg
     8101 cgcgctagtt agggggggac gtacgtcgca ggttagtcag atagtctagc gtttcgccat
     8161 tcgtcgttat gtaacggttt agtgcgggaa ccggttgcat agtagtttcg ttcggatcgg
     8221 cgtccccatc atgggtcggg cacagcagga actcagacgg catggtgcga gcagcaatta
     8281 ttgcgattat tggtttttgt accaaatatg cgtacggaac cattgcggta gcactgctga
     8341 tcgccaccgt ggcagggtac tattctgcgg aacatttcgc gatcaacact gatgtcaata
     8401 cattgatctc agaaaaactt tcgtggcggc aacgggaact taaatttgaa aaatctattc
     8461 ctcaacgata cgataatata cttgtagtca tcgacgctcc caccccagag ttggctgcgc
     8521 ttgcgcgcgc cgctttggcc aacaagttgt ctgacaataa agaattgttt ccatctgtaa
     8581 cacagttggg tggcacaccg ttttttgcac aaaacgggct gttgtttcgg tcaaaggaag
     8641 aagttggtgg gatgaccagg cagcttgccg cggccgcccc tttgatacgc gttcctgttg
     8701 tggacccaag tctgcgcggg ctcagccaga tgatcgtgct ggtcttggct ggcgtgcgcg
     8761 aacacgaact gacgctcgat gatgtggcac ggcccttcac cacggccgcc gaggcactcg
     8821 agaacgtatt ggctggccgt cccgcgacct tctcgtggca cgagctcatg agcggcaccc
     8881 catcgactcc gagcgacctg cgccgcctta ttgatgtcaa gcccaagctt gattttacag
     8941 tcttggagcc cggcaaggag gcgaccgacg cgatccgcgc tgcggccgcg agcctcgacc
     9001 ttgcctcgcg ctttcaggcg cgtgtgcggc taaccggccc ggtgccgatc gctaacgagg
     9061 aattcgccac cgtcaaggac ggcgccttga tcaacggact tgtcacactt gtgctcgtgc
     9121 tgctcattct ttggctggcg ttgcgatcgt ttcggatcat ccttgcggta gcagtcgccc
     9181 tgttcatcgg gttgtcgatc accgccatgg tggggttgat gttggttggc tcgctcaacc
     9241 ttatttcaat agcctttgcg gtgcttttca tcggtctcgg ggtcgacttc ggtattcagt
     9301 tcagcgttcg ctaccgccag gaacggttca aaaggccgaa cttgcgaacc gcgctacttc
     9361 gggcgggcgc gcgcgctgga attcccctga ccctcgcggc tgccgccgtt gcggcgggat
     9421 ttttgtcatt cctgccgacc gcctatcggg gcgtttcaga acttggcgaa atcgctggcg
     9481 ctggaatgat aatcgcctac ctgaccagca ttacggtgct gcctgcattg ctccacgtgt
     9541 tccatcctgc aggtgagccg gaagggctcg gatttgcttg gttggcgcca gtcgacgact
     9601 tcctggaaaa ccaccggcgt ccaatcatca cggtgacgct agggcttgcg atcgcgggat
     9661 tgccgctctt gtattatctc cacttcgact tcaacccaat gaatctgcgt agtccaaagg
     9721 tcgagtcgat ggcgacctat ctggatctgc ggcgtgaccc aagtgtcggg gccaactccg
     9781 tcaacgtgct cgtgccctcg actgctgcag ccgatcaaac agctcagcgg ctccgggcgc
     9841 tgccggaagt tgatcgcgtc gtgacgatcg cggatttcat ccccaccgat cagcccgaaa
     9901 agctcgcaat gattgccgat gccgccgccg tcctcaatcc ggtcctgcgc gctccgccgc
     9961 ggccgacacc gacggacgcc gataacgtcg aggcgctcag acggggaatt gacagtctta
    10021 caaaggccgc ggccgaacag gcggggccgg gcgccgatgc ttcactgcgt ctcgcggggg
    10081 cattgtcgag gcttgcagtg gcggatcagg cggtgcgcaa acgcaccgaa tccgtattca
    10141 tcatgccgat caagaacaat ctcgaagata ttcgcaatct cgtgctggcc aagcaggttt
    10201 cactcgaaaa tctaccacct gaaatcgtcg atgactggcg cagcaaggac ggcgatgttc
    10261 gcgtcgaagc ggtgccaaaa ggcaatccgg acgacaatga gaacatccgc gcctttgcca
    10321 aagcggtcct tgcggtcgag ccgaacgcga tcggcgggcc gatttcgatt ctcgagtccg
    10381 gcgacaccat cgtgcgggcc ttcttcgagg ccggcgtctg ggctttgggc tccatcgcca
    10441 ttctcttgtg gcttgcgcta cgtcggttcg gcgatgtgct gctgacgctt gttccgctgg
    10501 tgctggcggg cgtcgtaacc ctggagatct gtgtgctgat aggcttgcag ctcaatttcg
    10561 ccaacatcat tgccttgccg ctgctgctcg gcgtcggagt tgctttcaag atttattaca
    10621 tcctgtcatg gcgagctggc cgcaccaagc tcttgcaatc gagtctaacg cgcgccgtta
    10681 tcttcagtgc tgctaccacg gcaactgcct tcggtagcct ttggctatcc agccatccgg
    10741 gtacgtcgag catgggaaag ttgctggccc tatcgctttg ctgcacgctt gcggccgcgg
    10801 tgctatttca gcccgccctt atgggccgac cccgcaccat ccggaatacc tgagcaggca
    10861 gtgagcgtag gagtaggagc ctgcttgggc cgggccgtgt ttggcgctcg ttgtggcggg
    10921 gaggcggttt cggccgtctt gacccgtgtc cagttctcgc cgccgcacag aaagccgagg
    10981 acgcaaccct cgatcttcag gacgtccggg gaagtcaggc tgattcgtga atcataggtc
    11041 ttgccattct ccgcattgta aacctcacct tgccagaccc cgggtttggt cggcttcatc
    11101 gccagcagaa tgtgcagtcc aagcgtcggg cgattgcgtt cggccggatc ggggttgtac
    11161 aaatccaccc ctcccgcctc cttttcccac gagatgatgc cccacaagac gccatcgcag
    11221 tcatcgatcc gaatattggc aagtccattg gcggtgcgcc attcgccagt cggttccgcg
    11281 gccacggcgt agcctccaag caaaaatgtc gcagtccaga ttgttaaaat cgagcgcatg
    11341 atgtctcctg gtagcgcttg cttatttaac ttataatcaa ccatacattt accgacattt
    11401 ccggcggtat ttcggcaacc accgaattac cagagaggag gaagtccagt tgagccatcg
    11461 gccccactta atctacgcga gcgatagccc gctcctaagc ttaaacgtcg cggagcttta
    11521 tgctcagaac gaagccgatc gatatgatat tcacacccgc catcttaacg aacagatggt
    11581 ccgtgtcctg cgcacaatcg gatatgatgt cgggttctgc cgtggctccg gacaatatct
    11641 gtttgatcgt gaaggcaata aatatctcga cctcctgagc ggatacggcg tgttcgccat
    11701 cgggcgcaac cacccggcat tgcgcgaagc ccttaacagt gtgctcgatg cccatttgcc
    11761 caatctggta caattcgacg tttcgccgct cgccggcgtg ctggctaagc ggctgcttga
    11821 attcgtgccc catctcgaca aggtgttctt cgccaactcc ggtaccgagg cgtccgaaac
    11881 tgcgatcaag tttgcgcgtt gcgcgaccgg tcgtcccggc attgtctact gtgagcatgc
    11941 gttccacggc ttgaccaacg gctccttgtc gctcaatggc gatgccatct ttcgaagcgg
    12001 ttttgagcct ctgctgccgc actgccgtgt ggttccgttc aatgatctcg ccgcgctcga
    12061 gcgcgcactt gcgtcgcgcg acatcgcggc gttcatcgtc gagccgatcc agggcaaagg
    12121 cgtcaacgtg ccggccgacg actatttacg cgaagcggcg gcactgtgtc gccgtcatgg
    12181 cacactcttt gttgccgacg agatccagac cggactcgga cgcagcggac ggttccttgc
    12241 ggtggagcac tggggcgtcg agcccgatat ggtgctgctc gccaaggcgt tgtcgggcgg
    12301 ccacgttccc gtgagtgcag tgctcacccg taagcgcatc tacgacaaga tttttgaccg
    12361 catcgatcgc gcggtggtgc acggatcgac ctacgcgaag aatgatctcg ccatggctgc
    12421 tggcatcgcg accctcgaag tcatgaaaca tgagcgtctc atcgcccgcg ctgaccggct
    12481 tggcgaaagg ctgcggctca ccttccggcg tctgttcgag cgctacgaat tcgtgcgcga
    12541 agttcgcggc aaaggcctga tgatcgg
//
LOCUS       DATILV010000890         3868 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_729014, whole genome shotgun sequence.
ACCESSION   DATILV010000890 DATILV010000000
VERSION     DATILV010000890.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3868
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_729014"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(269..1168)
                     /locus_tag="VLJ17_21545"
     CDS             complement(269..1168)
                     /locus_tag="VLJ17_21545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009025777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HSV25598.1"
                     /translation="MLAHATFAVSNFVEVAYVEGAPGETSHAGDSANQVNGLMKDRKD
                     KTRTPILAAGGIVLRGDRQPQFAVVQLRKLGAWVLPKGKLAAGEDAIAAARREVLEET
                     GHRVTIHEFLGTLAYEASRRPKVVQFWRMQALGEPIGGLMRDVKAVQWLALEDAIDRL
                     THPREQAFLEQVGPIALKSAERSARRARERPDDRNLVRRAPSRTATMEESKPFAPVAG
                     ANPVEHAPQVEQDVGEGAGLVPAADVLAPADVTAPANVTAPAGQSIQTEQARKIESAF
                     GHNLIEKTLVWFRQITTHRPPLD"
     gene            complement(1623..3485)
                     /gene="thiC"
                     /locus_tag="VLJ17_21550"
     CDS             complement(1623..3485)
                     /gene="thiC"
                     /locus_tag="VLJ17_21550"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HSV25599.1"
                     /translation="MNVHDRDIVTPKVTTGPIEGSRKVYAVPEAAPDLRVPVREIVLT
                     EAAAEPAIPVYDTTGPYTDNSVAIDVEAGLKRTRIEWVRERGGVEDYEGRPIQPVDNG
                     NVSGKHLARAFPIVQRPHRGLPGKPVTQYEWARAGIVTKEMIYVAERENLGRKVQLDR
                     AEAARADGESFGAAVPLFVTPEFVRSEVARGRAIIPSNINHAELEPMIIGRNFITKIN
                     ANIGNSAVTSSVEEEVDKMVWAIRWGADTVMDLSTGRNIHNTREWIIRNSPVPIGTVP
                     IYQALEKVSGDPVKLDWECYKDTLIEQCEQGVDYFTIHAGVRLAYVPLTANRVTGIVS
                     RGGSIMAKWCLAHHKESFLYERFDEICDLMRKYDVSFSLGDGLRPGSIADANDSAQFA
                     ELETLGELTKIAWAKGCQVMIEGPGHVPMHKIKINMDKQLKACGEAPFYTLGPLVTDI
                     APAYDHITSAIGAAMIGWFGTAMLCYVTPKEHLGLPDRDDVKEGVITYKIAAHAADLA
                     KGHPAAQLRDDALSRARFDFRWVDQFNLSLDPDTARQYHDETLPKEAHKVAHFCSMCG
                     PKFCSMKITQDVRDYAATLNDKEAGMAEMSKKFREMGSEVYVEAETVRASNRVL"
     regulatory      complement(3582..3714)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
BASE COUNT          703 a         1224 c         1145 g          796 t
ORIGIN      
        1 cagtgtaccc aggtctctct aagccacact atcatccacc cacggtgccg gaccattcgg
       61 atgcccccaa gccgccgtgt gcccccgttg ctcttccagc gagtctgcca gaatcgacgt
      121 gaccaaatct acccaagccc acccaatttg tcagaaattt gttgaacaca cgatgaatat
      181 cggtcgccac aattgaacga aatgaggcga cctttaatcg acgcacgcgc tgttcgcgag
      241 cccttccgcg ctgtcgttct tcaatacctc aatcgagcgg tggccgatgc gtggtgattt
      301 ggcggaacca caccaaggtc ttttcaatca aattgtggcc gaaggcggat tcgatcttgc
      361 gggcttgctc ggtttggatc gattgtcccg ccggggctgt gacgttagcg ggagccgtga
      421 cgtccgcggg cgccaggaca tccgcggccg gtacgaggcc ggcaccttcg cccacgtctt
      481 gttcgacctg tggggcgtgc tcaaccggat tcgccccggc gaccggcgcg aatggcttac
      541 tttcttccat agtggcggtg cgggacggcg cgcgcctgac gagatttcta tcgtcgggtc
      601 gttccctcgc acggcgcgcc gaccgttcgg cggatttgag cgcaatcggc cccacctgtt
      661 cgagaaacgc ctgctcccgg ggatgcgtga gccggtcgat ggcgtcctcc aatgcgagcc
      721 attgcaccgc cttcacgtcg cgcatcaaac cgccgatcgg ttcgccaagc gcttgcatgc
      781 gccagaactg gacgaccttc ggccgtcggc tcgcctcata ggcgagcgtg cccaggaatt
      841 catggatcgt cacgcggtgt ccggtttcct ccagcacctc acgccgggct gccgcaatgg
      901 cgtcctcgcc agccgcgagc tttcctttgg gaagcaccca cgctcccaat ttacgcaact
      961 ggacgaccgc gaactgtggc tggcggtcgc cacgcaacac gattccgcca gctgccagga
     1021 tgggtgtacg ggtcttgtcc ttgcggtcct tcatcagccc attcacctgg ttggcgctgt
     1081 cgcctgcgtg actcgtttca ccgggtgcac cctccacata agcaacttcg acgaagttgg
     1141 aaaccgcaaa tgttgcatgt gccagcatcg cgagactgat ggatgacgcg ggcaagtcat
     1201 gtatgttccc aggcaagcga tcgcgaccgc tggaaaaccc acaaaaattg gaacgacaag
     1261 tggcttcttg cgcgcttgaa gcaagcggtt cgcgggaacg acggcatcat caaagagttt
     1321 tcagacggaa tcgtttttcc aatcttgtcg gcgttatcgc ggctcgcaaa acagaaaagc
     1381 ggccattgga gggcccgctt atcccaaggt ttttgccgag caggatatgc cgatcgcagc
     1441 gtggcggcag ttatcgtgat gcgatcatcg ccccatgtta atggggcgat ggggcgccgc
     1501 agacgaggcg ctcatgacct tgacggaact ggctgtgcgg tattctcgaa aacgccaccg
     1561 catgatcgtt atttgctggc aggcaatctc acagcggcct gccagtttcg aacctgacgc
     1621 tttcacaaca ccctgttgct cgccctcacg gtctccgcct cgacatacac ctcactcccc
     1681 atctcgcgga acttcttgga catctccgcc atcccggctt ccttgtcgtt cagcgtcgcc
     1741 gcatagtcgc gcacgtcctg ggtaatcttc atcgaacaga acttcggccc gcacatcgag
     1801 cagaaatgcg cgaccttgtg ggcctccttg ggcagggtct cgtcgtgata ttgccgcgcc
     1861 gtatccgggt ccaatgacaa attgaactgg tcgacccagc ggaagtcgaa gcgcgcccgg
     1921 ctcagcgcat cgtcgcgcag ttgcgcggcc gggtggccct tggcgagatc ggcggcgtgg
     1981 gccgcgatct tgtaagtgat gacgccttcc ttgacgtcgt cgcggtcggg caggccgagg
     2041 tgctccttgg gcgtgacgta gcagagcatg gcggtgccga accagccgat catggcggcg
     2101 ccgatcgcgc tcgtgatgtg gtcataggcc ggcgcgatgt cggtgacgag cggccccagc
     2161 gtatagaacg gcgcctcgcc gcaagccttc aactgcttat ccatattgat cttgatcttg
     2221 tgcatcggca catggccggg gccttcaatc atgacctggc agcccttggc ccaggcgatc
     2281 ttggtgagtt cgccgagggt ctccagctcc gcgaactgcg cactgtcatt ggcgtccgcg
     2341 atcgaacccg gccgcaatcc gtcgccgagc gagaacgaca cgtcgtattt gcgcatcaga
     2401 tcgcagatct cgtcgaagcg ctcgtagagg aagctctcct tgtgatgcgc aaggcaccac
     2461 ttcgccatga tggagccgcc acgcgacacg atgccggtga cccggttcgc ggtcagcggc
     2521 acataagcga gccgtacgcc ggcgtggatc gtgaaatagt cgactccctg ctcgcattgc
     2581 tcgatcaggg tgtccttgta acactcccag tcgagcttaa cggggtcgcc gctgaccttc
     2641 tccaaggcct ggtagatcgg caccgttccg atcggcaccg gcgaattgcg gatgatccac
     2701 tcccgggtgt tgtggatgtt gcggccggtg gagaggtcca tcacggtatc ggcgccccag
     2761 cggatcgccc acaccatctt gtcgacttcc tcttcgaccg acgacgtcac ggcggaattg
     2821 ccgatattgg cattgatctt agtgatgaag ttgcggccga tgatcatcgg ctccagctcg
     2881 gcgtggttga tgttggacgg aatgatggcg cgcccgcgcg ccacctcact gcgcacgaac
     2941 tccggcgtca cgaacagcgg caccgccgcg ccaaagcttt caccgtcggc gcgggctgct
     3001 tcggcgcgat cgagctgtac cttgcggccg agattctcgc gctcggcaac gtagatcatt
     3061 tccttggtaa cgatgccagc acgcgcccat tcatattgcg tcaccggttt ccccggcaaa
     3121 ccccggtgcg gtcgctggac gatcgggaag gcacgtgcga gatgcttgcc actgacatta
     3181 ccgttgtcca ccggctgaat aggacgacct tcgtagtcct cgacgccacc gcgttcgcga
     3241 acccattcga tacgtgtgcg cttgagacca gcttccacat cgatcgcgac actattgtcc
     3301 gtataaggtc ccgtcgtatc gtagaccggg atcgcgggct ccgcggcggc ttccgtcaac
     3361 acgatctcgc gcaccggaac gcgcagatcg ggcgccgctt ccggcaccgc atagaccttg
     3421 cgcgagccct cgattggtcc ggtagtgacc ttcggggtga cgatgtcacg gtcatggacg
     3481 ttcatgttgg aactcctggt tagccgtcga gggcatgttc actgtttcga ccgcccaatg
     3541 cgcccggttt tcatatcggt ccacagttct gggtatacgc gtggagggaa acggtccgtc
     3601 ccttcgccgg catgacccgg atcaggttca aagggtctcc gcggtgccgc gcccagatgg
     3661 gcaaaggctt ggcggtctct cagctcctta tccggagctc ccctcggaac gtcgctaatg
     3721 taggccgatg ggaaccggtg tcaacgcact acaccccttc cggggccgcg gccaaaagta
     3781 gtagcctgtg gggcaactgc cgggctggat agatcaactt cccgcggccg gcaggccgtc
     3841 gaatgccagg gaggtaagcc acgcaaac
//
LOCUS       DATILV010000891         3255 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2522584, whole genome shotgun sequence.
ACCESSION   DATILV010000891 DATILV010000000
VERSION     DATILV010000891.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3255)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3255)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3255
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2522584"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            320..1126
                     /locus_tag="VLJ17_21555"
     CDS             320..1126
                     /locus_tag="VLJ17_21555"
                     /inference="COORDINATES: protein motif:HMM:NF025774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MEDS domain-containing protein"
                     /protein_id="HSV25600.1"
                     /translation="MSKAAQPVEPPYAATLAAIRHGSHLCAFYETEDDLLDLVVPFCA
                     AGSQRGELCVWMMPDRVDEHTAGSTARKTLTESGTELYAGREFYLKGASFEGGPIVRF
                     WNEKLHQAIATSHLGLCATGDTGWLEQRDWHAFLEYENELNRVIADRPIAVLCTYPFS
                     ACKAGDMFDVIRAHQVALAKRQTDWAVIKAPLTDSNAEALDVASRVGSLSQREREVLT
                     GVVGGLPGKQIAFNLGISIRTVEAHRTRILRRLGVHTMAEAVRLWTLAQH"
     gene            1597..2292
                     /locus_tag="VLJ17_21560"
     CDS             1597..2292
                     /locus_tag="VLJ17_21560"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV25601.1"
                     /translation="MKQPIKNVVLVHGAFADGSGWKRVADILKNDGYKVSVAQPPETS
                     YADDQKYTKAAIDAMGGPVVLVGHSYGGSIITEAGNHANVAALVYIAAFALDEGESCA
                     SIEQAVPQASTAFKPDSNGLWWIDEAHFAADFAADIPRDEAQFMAISQVPISTDSFTH
                     KVTKPAWKHKPTWYMVATEDRSINPDQERMMAKRAKAKTVEVKASHVAYMSHPKETAN
                     LIEEAAAHASASQ"
     gene            2860..3153
                     /locus_tag="VLJ17_21565"
     CDS             2860..3153
                     /locus_tag="VLJ17_21565"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HSV25602.1"
                     /translation="MRSMPLLLTMAATQRNTLAKLAACAPLLMHLGEEDEFISKTAQA
                     QIKTALAKKPNATVYSYPGQRHAFSRHNGTHYNATAAVLANGRSREFLNQHLR"
BASE COUNT          719 a          930 c          973 g          633 t
ORIGIN      
        1 cgtcgcgctt ggcgatctcg ccggcttcgc gaatggccgc agtcgcggcc ttggcaatcg
       61 gccgctgcat ttcgttcacg atggtgtcga cgaagcgctt ggcgacgtca gagaaggcga
      121 accgcaggct catttttcaa cagatagccc aattcagccg accgacactc aatcgctggc
      181 gcgtgtctgc acctggcgaa accggacatg tggatgtggc agagcggggc cgagtttgac
      241 ccctagccga cagcggttga gcaagccatg gcgcgtagtt gtaacgctgg cgtccgccgt
      301 gctattttcc tgccttgcga tgtccaaagc cgcccagcca gtggaaccgc cctatgcagc
      361 gactcttgct gctatacggc atggctcaca cctctgtgcc ttttacgaga ccgaagacga
      421 tctactcgac cttgtggtcc cattctgcgc ggctggttcc cagcgaggcg agttgtgtgt
      481 gtggatgatg ccggaccgcg tcgatgagca caccgccgga agcactgcgc gtaaaaccct
      541 cactgaaagc ggcactgagc tctacgcggg ccgggaattt tatctgaaag gggcatcctt
      601 cgaaggcggg ccgatcgtcc gcttttggaa tgagaaactg catcaggcca ttgcgaccag
      661 ccatttggga ctatgcgcca ctggcgacac aggctggctg gagcaaaggg attggcatgc
      721 gtttctcgag tacgaaaacg agctgaaccg cgtaatagcc gacagaccca tagcggtgct
      781 ttgcacctat ccgttttcgg cgtgcaaagc gggagatatg tttgacgtca ttcgcgcgca
      841 tcaggtagcg ctggcgaagc ggcagacgga ttgggctgtc ataaaagcac ctcttacgga
      901 cagcaatgcg gaggcgctgg acgtagccag tcgagtgggc tcgctgagcc agcgtgagcg
      961 ggaagtgctg acaggcgtcg tcggtggcct gccgggcaaa cagattgcgt tcaatctcgg
     1021 gatcagtatc cgcacggttg aggcgcaccg tacccgtata ttaagacggc tgggcgtgca
     1081 caccatggca gaggcggtaa gactgtggac cctggcccag cactaaagag gcaaaggctt
     1141 ctcgcgctgg tagagttttt ttggaacagc cggtagtgag gagcgcgagc tcgggagcgc
     1201 taccggcgaa cctggcgcct agcttcgtgc tgttctgcca acgaccaaaa ccagcacacg
     1261 gtaaaccact gatctcaaat cagtaattcc tttgcttagg acctccacga caaatatcga
     1321 gcgacgcctc ggacgacggg actgtgcatc gcagtccgct ctaccgattc cctagcagcg
     1381 caattcgctg cggccgatta cgtggttcta cgatacgtgg aattgccaaa ttccctccgc
     1441 cgcatgcatg cccgatgctt gtgagccgat aaggcaggag gaagaaatga aacccacgca
     1501 atcaagacca agcatcgttt tctgtcacgg catctgggcc gacggcatcg aaaatcaact
     1561 gatccgaatg gatctttgcc gcaaaggaga acagtcgtga aacagcccat taagaatgtc
     1621 gttctggtgc atggagcttt cgcggatggc tccggctgga agagggtcgc agacatcctc
     1681 aagaacgatg gctacaaggt gtcggtggcg cagccccccg agacttcgta cgccgacgac
     1741 caaaagtaca cgaaggcggc tatcgatgcc atgggcggcc cagtggtttt ggttggccac
     1801 agctacggcg ggtccatcat caccgaggcc ggcaatcatg cgaacgttgc agcgcttgtc
     1861 tatattgccg cctttgccct cgatgaaggt gagagctgtg cgtcgatcga acaggccgtg
     1921 ccgcaagcgt ccacggcttt caagccggac agcaacgggc tttggtggat tgacgaggcg
     1981 catttcgcgg ccgacttcgc cgcggatatt ccacgggatg aggcgcagtt catggctatt
     2041 tcgcaggtcc cgatctctac cgactccttc acccacaagg ttacgaaacc cgcctggaag
     2101 cacaagccca cctggtacat ggtggctacc gaagaccgat cgatcaatcc ggatcaggag
     2161 cgcatgatgg caaagcgcgc taaggccaag acggtcgaag tgaaggcgag ccatgtggcg
     2221 tacatgtctc atccgaagga aacagcgaac ctcatcgaag aggctgccgc gcacgcgtcg
     2281 gccagtcagt gaagctgacg acgcagcgcg aaagcaggtc gatcactttc ctcacaccat
     2341 caaagcggat ggccgattaa acgatcgcca gcgccgtgaa caagagctat tcgcgtctca
     2401 acccatagcg cggccaatcg gcaacggttc gtttcaaaga aattcatcag gagcgaagcg
     2461 tggaaaagca aatcgtcatc gagtctccgg atgggacgtt cggcgcctat atttcacggc
     2521 ccgcaacctt acccgccccc gtggtggttg ttctccagga attgtttgga gttaacgccg
     2581 acattcgagc tacttgcgac gagttggcag cccagggata catcgcgatc gcgccagacc
     2641 tcttctggcg acaggagcct gacgttgatc ttgacgtaag gtcagaagcc gactggcagc
     2701 acggtctgcg gctttacggg gggtatgatc gcgacgctgg cgcgcgcgat atcgcgcaaa
     2761 caatccgcac cgctgttaag ttgcccgagt cgaccgggag ggttgctctg caaggctact
     2821 gcctcggcgc attgatggcc tttatcacgg ccgctcgcca tgaggtcgat gccgctgttg
     2881 cttaccatgg cggcgacaca gagaaatacc ttggcgaagt tggcagcttg cgcccccttg
     2941 ctgatgcacc ttggcgagga ggacgaattc atctcaaaga cggcgcaagc gcaaatcaaa
     3001 acggcgctgg caaagaagcc gaacgcaacc gtctacagtt atccgggtca gcgtcacgcg
     3061 ttttctcggc acaatgggac gcactacaat gccaccgcgg cagtactggc gaacggacga
     3121 tcacgcgagt ttctcaatca acacctgcgg tgacctaagg gcgcaacggt gcgaatgtcc
     3181 gtctctggcc cgaagcgggc gccgagtgat cgccctttgg agtccgctat cgtgggtaca
     3241 gcagacatct cggag
//
LOCUS       DATILV010000892         1983 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2779619, whole genome shotgun sequence.
ACCESSION   DATILV010000892 DATILV010000000
VERSION     DATILV010000892.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1983)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1983)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1983
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2779619"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..328)
                     /locus_tag="VLJ17_21570"
     CDS             complement(<1..328)
                     /locus_tag="VLJ17_21570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004609 - phosphatidylserine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HSV25603.1"
                     /translation="MSIYDSVRAQVVPITPEGYPFIGAFALVSLILFWLWSPLGWLGT
                     LATIWCAYFFRDPSRITPVRDGLVVSPADGRVSQITTAAPPHELGLGDKPLPRISIFM
                     SVFDCHI"
     gene            complement(337..>1983)
                     /locus_tag="VLJ17_21575"
     CDS             complement(337..>1983)
                     /locus_tag="VLJ17_21575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HSV25604.1"
                     /translation="LLTQWRDGIFARVAMHAVRKLAYITFVHMHELSLRFHLERKTGG
                     LTRVLERGRNAIETIVRMVILQLSPTVIELGLIVGVLMWQFDWRYVVVILVTVTVYMT
                     YTYHATEWRIGIRRKMNDSDTDANVKAIDSLLNYETVKYFSAEQREAERYDRSMARYE
                     DASVKAYTSLAVLNAGQAVIFTFGLAAAMVMCAYEIQAGTKTVGDFVLINAMMIQLYQ
                     PLNFMGMVYREIKQAVTDIEIMFSILAREPEIKDVTGAAPLKVTSGTIRFDDVHFAYE
                     SERGILKGVSFDVPAGKTVAVVGPSGAGKSTISRLLFRFYDLAEGRILIDGQDIAKVT
                     QISLRRAIGMVPQDTVLFNDTIRYNIRYGRWEASNAEVEEAARLAQIDRLIQLAPKGY
                     ETEVGERGLKLSGGEKQRVAIARTILKAPPILVLDEATSALDSHTEKEIQDALERVAQ
                     GRTTLVIAHRLSTIVGADEIIVLDQGEIVERGTHYALLAANGLYAGMWNRQREAEEAR
                     EKLARAGEDEGAPNRNPPPVEDVITEAASKSFEAPADAAE"
BASE COUNT          384 a          610 c          603 g          386 t
ORIGIN      
        1 tgatgtggca atcgaacacg ctcatgaaga tcgagatacg tggcagcggc ttgtcgccga
       61 gcccgagttc atgcggcgga gccgcagtgg tgatctggct cacgcggccg tcagccggcg
      121 acaccaccaa cccatcacgc accggcgtta tgcgcgaagg atcgcggaag aaataggcac
      181 accagatcgt cgccagcgtg cctagccagc cgagcgggct ccacagccag aatagaatca
      241 agctgacgag cgcgaaggca ccaatgaacg gatagccttc cggcgtgatc ggcaccacct
      301 gcgcgcggac cgaatcatag atcgacatgc cctatcctac tccgccgcgt ccgccggcgc
      361 ctcgaatgat tttgaggcgg cctctgtaat gacatcctcc accggcggcg gattgcggtt
      421 gggcgcgccc tcgtcttcac cagcgcgggc gagcttctcg cgcgcctcct cggcctcacg
      481 ctgcctattc cacataccgg catagagccc gttggcggcc agcaacgcat aatgagtgcc
      541 gcgttcgacg atttcgccct ggtcgagcac gatgatctcg tcggcgccaa caatggtgga
      601 aagccggtgc gcgatcacca gcgtggtgcg gccctgcgct acccgctcca gcgcatcctg
      661 gatttccttt tcggtatggc tgtcgagcgc tgatgtcgcc tcgtccagca ccaggatcgg
      721 cggcgctttc aaaatcgtgc gcgcaatggc gacgcgttgc ttctcgccgc cggagagctt
      781 caagccgcgt tcgcctacct cggtctcgta gcctttcggc gcaagctgaa tgagacgatc
      841 gatctgcgcg agccgggcgg cttcctccac ctcggcgttg ctcgcttccc aacgcccata
      901 gcggatattg tagcggatgg tgtcgttgaa cagcacagtg tcctgcggca ccatgccgat
      961 cgcccggcgc agcgagattt gcgtgacctt ggcgatatcc tggccgtcga tcagaatgcg
     1021 accctcggcg agatcgtaaa agcggaacaa cagccgcgag atcgtcgact tgccggcgcc
     1081 ggacggaccg accactgcca ccgttttgcc ggccggtacg tcgaagctga cgcccttgag
     1141 aatgccccgt tccgactcgt aggcgaagtg cacgtcgtcg aaacggatgg tgccgctggt
     1201 gactttaagc ggtgctgcgc cggttacatc cttgatttcc ggctcgcgtg ccaggatcga
     1261 gaacatgatc tcgatgtcgg tcaccgcttg cttgatctcg cgataaacca tgcccatgaa
     1321 attgagtggc tggtagagct ggatcatcat tgcgttgatc agaacgaaat cgccgaccgt
     1381 cttggtgcca gcctggattt cgtaagcaca catcaccata gcggcagcga gcccgaaggt
     1441 gaaaatcacc gcctgtccgg cattgagcac ggccagagag gtataggcct tgacgctggc
     1501 gtcctcgtag cgagccatcg atctgtcata gcgctcggct tcgcgctgct cggcgctgaa
     1561 atatttcacc gtctcgtagt taagcagcga gtcgattgcc ttgacgttgg cgtcagtatc
     1621 gctgtcgttc atcttgcgac ggatgccgat gcgccactcg gtggcatgat aggtgtaggt
     1681 catgtagacg gtgacggtga ctaggatcac aacgacatag cgccagtcga attgccacat
     1741 caacacgccg acgatcagcc ccagttcgat gacggtgggt gagagctgca agatcaccat
     1801 gcgcacgatg gtttcgatag cgttgcggcc gcgctccagc acgcgggtga gcccgccggt
     1861 cttgcgctcg agatggaaac gcagcgacag ctcgtgcatg tgcacgaagg tgatgtaggc
     1921 gagcttccgc accgcgtgca tggcgacgcg ggcaaagatg ccgtcgcgcc attgcgtgag
     1981 cag
//
LOCUS       DATILV010000893         2544 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2264889, whole genome shotgun sequence.
ACCESSION   DATILV010000893 DATILV010000000
VERSION     DATILV010000893.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2544)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2544)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2544
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2264889"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(505..2241)
                     /locus_tag="VLJ17_21580"
     CDS             complement(505..2241)
                     /locus_tag="VLJ17_21580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HSV25605.1"
                     /translation="MAAISQKQLTKFIRGIGVRQIRLACGLVLFAYLVSHFLNHALGN
                     ISMDALAAGVWYHTAFWQFLPVAIVFYTAALVHAGLGIWALYERRQFRWKTIEPLQLV
                     LGLSIPALIISHLAGVRLGHTLFGYEKLYPQVLYAYWIVRPYKMWLMFGVLTIAWTHG
                     CIGLYFWLRMKAFYKSASPFLLSVAVLVPTLAMLGLYQGGRSVVADSDRAEWRADNLS
                     QRQVGIPAEQDVLDSIADYFLIFYLGLLGFVLLARGARALNERRGGMINLSYGNGRTI
                     RVPKGLSVLEASLRYNIPHASVCGGRARCSTCRIRVIGDCTSLPQPSKREAFVLSRVG
                     AEDPSIRLACQLRPTADLSFFQLFMPHTMSANAPASNPTRIGQERYLVSMFVDMRGST
                     RLAENRLPFDTVFIVNRFLGAVSQAVIECGGRPNQFVGDGELALFGLATGPQTACRQA
                     LKAAAMIAANVDELNQFLGHDLREPIRFGIGIHGGEVIIGDIGYRDHIVFTALGDAVN
                     VAARLQDMTKTLACEAILSEEVRITAGLPPDGLPRQEVAIRGRTEPMVVRSLTDAKAL
                     IVLVDDVDVAAA"
     gene            complement(2281..>2544)
                     /locus_tag="VLJ17_21585"
     CDS             complement(2281..>2544)
                     /locus_tag="VLJ17_21585"
                     /inference="COORDINATES: protein motif:HMM:NF012610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HSV25606.1"
                     /translation="AYGRSLSSRAMAHRQFILSSELPSDGWFDEKQVTHKLRVSRTPF
                     REAIEILAKGGLVEIKPYRGFYVRSFPHTETADLYELPPWKIP"
BASE COUNT          560 a          748 c          746 g          490 t
ORIGIN      
        1 gagtctcgct ctcgttggag ccgcccgact ggagcgttgc attcgccacg accatgtacc
       61 cttgatccag acaagctttg agccttaccc ggctctacta tcagattttt ttcgctcgca
      121 cgatgtcaag ttgcgccaac gtcaaactga taggacagat ggatcttcct cagcacgtga
      181 tctgaactct ggttctacgc aaccttcttt tgaccgaaag ccagccgcca gcgaccattc
      241 tcaaaaatga ccgtggcatt ttcgccaatg aaactcacga ttccgggatt cggacgattt
      301 ctggatcgcc gtccaggctc gccgaaaaca tgcacagtcc gcgatccagg ccctacgacg
      361 aatagaattt gctttcggac cgcggaagtc caagattcag tttcggcctg acccatcgcc
      421 catcagtcgc ggcgcgcaga agcgggttcg agaaaattgc ggttggttca ggacaatttt
      481 ctgaacggtt gtcggggagc gctctcacgc cgcggcaaca tccacgtcgt caaccagcac
      541 gatcaacgcc ttcgcgtcag tgagggagcg gacgaccatc ggttcggtgc gtccgcggat
      601 cgcaacttcc tgccgcggta acccgtcggg cggcaagccg gccgttatgc gaacttcctc
      661 cgaaaggatc gcctcacatg cgagcgtctt tgtcatgtcc tgcagccgcg cggcgacatt
      721 gaccgcgtct ccgagcgcgg tgaacacaat gtgatcgcgg tagccgatgt caccgatgat
      781 cacttcgccg ccatgaatgc cgataccgaa gcggatcggc tcgcgcaaat catggccgag
      841 gaattgattg agctcatcga cattggcggc aatcatggcc gccgccttga gcgcctggcg
      901 gcaggcggtt tgcgggccgg tagcgagccc aaacagcgcc agttctccgt cgccgacgaa
      961 ttggttgggc ctgccgccgc attcgattac agcttgcgac accgcgccaa ggaagcgatt
     1021 gacgatgaaa accgtatcga acggcagccg gttttcagcg agcctggtcg aaccccgcat
     1081 gtccacgaac atgctgacga gataacgctc ctggccgatt cgggtcgggt ttgaagcggg
     1141 cgcatttgcc gacatggtat gcggcataaa gagctgaaag aacgagagat cagccgtcgg
     1201 ccgcaactgg catgccaagc ggatggacgg atcttccgct cccacccggc tcagcacaaa
     1261 ggcctcccgc ttggacggct gcggcagaga cgtgcagtcc ccgatcacgc gaatgcggca
     1321 ggtggagcag cgggcgcggc cgccgcagac gcttgcatgc gggatgttat agcgcaggct
     1381 ggcctcaagc acgctcaggc ccttcggcac gcgaatcgtc ctgccattgc catatgacag
     1441 gttgatcatg ccgccacggc gctcgttgag ggcgcgcgcg ccccttgcca gcaagacaaa
     1501 tccgagcagg ccgagataga agatcaggaa ataatccgcg atgctgtcca atacgtcctg
     1561 ctcggctggt ataccgacct ggcgctgcga aagattgtcc gcgcgccatt cggcgcggtc
     1621 gctatctgcg acgacgcttc gtccgccctg atagagaccc agcatggcca gcgtcggaac
     1681 cagcaccgcc acggagagga gaaatggcga cgcgcttttg tagaacgctt tcatccggag
     1741 ccagaaataa agaccgatac agccgtgagt ccaggcgatg gtcaggaccc cgaacatcag
     1801 ccacattttg tacggccgta cgatccagta ggcatatagc acctgcggat agagcttttc
     1861 gtatccgaaa agcgtatggc ccagccgcac gccggctagg tggctgataa tgagcgctgg
     1921 aatgctcaag ccaaggacga gctggagtgg ctcgatcgtc ttccagcgaa attgccgacg
     1981 ctcgtaaagc gcccagattc cgagaccggc atggaccagt gctgcggtat aaaacacgat
     2041 tgcgaccggg agaaattgcc agaacgcggt gtggtaccag acaccggcgg caagggcatc
     2101 catcgaaata ttgccgagcg cgtggttgag gaaatggctg accagatagg caaacaacac
     2161 cagcccgcag gcgaggcgga tttgccggac gccgatgccg cggatgaatt ttgtaagctg
     2221 cttttgagaa atagcggcca tgcaatccag tcgaatagcg ggcagttcag ccgatgttag
     2281 ttatgggatt ttccaagggg gtagctcgta taggtccgct gtctcggtgt gaggaaagct
     2341 gcgcacataa aagccgcgat aaggcttgat ctcgaccagc ccaccctttg cgagtatctc
     2401 gatcgcctcg cggaacgggg ttcgactcac ccgcagcttg tgggtcacct gcttctcatc
     2461 gaaccatccg tcacttggca attcgctgga caagatgaat tgccggtgag ccattgcgcg
     2521 agacgatagg cttcggccat atgc
//
LOCUS       DATILV010000894         2221 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2780867, whole genome shotgun sequence.
ACCESSION   DATILV010000894 DATILV010000000
VERSION     DATILV010000894.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2221
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2780867"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1394)
                     /locus_tag="VLJ17_21590"
     CDS             complement(<1..1394)
                     /locus_tag="VLJ17_21590"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0052621 - diguanylate cyclase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor domain-containing diguanylate cyclase"
                     /protein_id="HSV25607.1"
                     /translation="MHSLYYVLTDQHREEFAPVRGNQQTVSRLVRYFEDIVTENKLSA
                     LVVEARCLNGDPSRETQRLAKLVAASRRVYLFSGNSECTERTWAPKTAFNLTNVEEGD
                     HHSIETGPFILVMEPRFCGLLASCIVPDERNSHTTAYEMVWTFDPNVVFTAVEYLMGR
                     MNAQRPEERDRFEALLKACTPRSSSLRLALTFTTKVTMLMQRQNELEMATNRISSAIS
                     STLELEPILQSAVEEVGRGLNARTAAVVLWQEGTNLPESMSIYERPEVQEDFSGKDET
                     SLGAEAERVGNSDKTDHSAASTAEPPYTGKKDSISQESAKEDNQQGTVTCGSLEVPIS
                     YRNTVIGMLVVEDDVASRNWEDEEMLMVKTVCDQLSVAISHARLFRQVQTQAMTDALT
                     GLYNHRYFQERLERETKLADRNNEQVSLILLDLDHLKNINDTHGHRSGDAALCHVASM
                     MRLAVREVDISARYG"
     gene            1794..>2221
                     /locus_tag="VLJ17_21595"
     CDS             1794..>2221
                     /locus_tag="VLJ17_21595"
                     /inference="COORDINATES: protein motif:HMM:NF023267.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25608.1"
                     /translation="MALAVAFESGCATKKYVRNRVAERVTPLENRTGELEETSRRNTQ
                     QIGELRTGVDDARARADRAQTTADSASSSAEQANTRVSGVERNVDDLRANLDKYTLQT
                     TSMVFFRLGSAVLTKAAMAQLDQLSSQITDRRGFVLEIVG"
BASE COUNT          466 a          625 c          613 g          517 t
ORIGIN      
        1 ccgtatcgcg cgcttatgtc gacttcacgc acggccaggc gcatcatcga agcgacgtgg
       61 cacagcgccg cgtcgcctga ccggtgaccg tgagtgtcgt tgatgttttt caagtgatct
      121 agatcaagaa gaatcaggga cacctgctcg ttgtttcgat ccgcgagctt ggtttcgcgt
      181 tccaggcgct cttgaaaata cctgtggttg tagagaccgg tcagcgcatc ggtcatcgcc
      241 tgggtttgga cctgccgaaa caggcgggca tggcttatgg cgaccgagag ctgatcgcac
      301 acggtcttga ccatcagcat ttcttcgtct tcccagttgc gagaggctac gtcgtcttca
      361 accacgagca tgccgatgac ggtattgcga taagaaatcg gcacttcaag cgagccgcaa
      421 gttaccgtgc cttgctggtt atcctctttc gcggactctt gcgaaatact gtccttcttg
      481 ccggtgtatg gcggttcggc cgtcgatgcg gcggaatgat cggttttatc gctgttgccg
      541 acgcgctctg cctcagcgcc gagcgatgtc tcatccttac cgctgaagtc ctcctgcact
      601 tctggccgct catagatgct catgctttcg ggcaagttcg ttccctcttg ccagagcact
      661 accgctgctg tgcgcgcgtt caacccgcgg ccgacctctt cgactgccga ttgaagtatc
      721 ggctcgagct cgagagtgct cgaaattgcc gagcttatgc gattggttgc catctcgagc
      781 tcgttctgac gttgcatcaa catcgtcacc ttggttgtga acgtgagcgc gagcctcagc
      841 gaagaactcc gcggcgtgca agccttcagc aatgcttcga accggtcgcg ttcctccggc
      901 ctttgagcat tcatgcgccc catcagatat tccacggcag tgaagactac gttgggatcg
      961 aatgtccaga ccatctcata agcggttgtg tgactgttcc gctcatccgg aacaatgcag
     1021 gatgccagca agccgcagaa gcggggttcc ataaccagga tgaacggacc cgtctcgatg
     1081 ctgtgatgat caccctcctc gacattcgtg aggttgaaag cagttttggg agcccacgtc
     1141 cgctctgtgc attcagagtt gcccgaaaac agatagactc ggcgcgaagc agcgaccagc
     1201 ttcgcgagcc gctgtgtctc tcgcgacgga tctccgttca gacaacgcgc ttcgacaacc
     1261 agcgccgaaa gcttgttctc ggtcacgatg tcttcgaaat accgaacgag acgcgacacc
     1321 gtctgctggt taccgcgcac cggggcgaac tcctcgcggt gttggtcggt cagaacataa
     1381 tagagcgaat gcatgaaaac aggtttctcg gggtgcgagg tcagggcttt aggggcttag
     1441 gcggccgtct caattctaac ctgccggagc gtgctgtcaa ttcttttcat atccagttgc
     1501 gttctctcat ttaagcggcc gcctgccatt tcgatcgaaa ggatgtaaat ttttcacacc
     1561 caagacggaa actcctacag aggaacctcc attccgcttg tcaaagaagc ctaaaccgct
     1621 cttatttaaa tgaattgacc tgcatcgcgg gatcagccga tggcacggtg ctcgcagagg
     1681 cacaaccgta aacttatcgc gccggtagcc ttaacctgtt ttatttaatc ggcgcactat
     1741 caaaatctga ggaggtagaa acgatgtata agttggtttg tgtcacccta ttgatggcgt
     1801 tggccgtcgc attcgaatct ggttgcgcca cgaagaagta tgtgcgcaat cgagtggcgg
     1861 aacgcgtcac gcctctcgaa aaccgcacgg gtgagcttga agagacctcg cggagaaaca
     1921 ctcaacaaat cggcgagttg agaaccggcg ttgatgatgc ccgcgcgcgc gcagataggg
     1981 cgcagactac cgctgatagc gcatcgtctt ctgctgagca agcgaacacc cgcgtgtcag
     2041 gcgtcgagcg caatgttgac gatctgcgcg caaatctcga caagtacacg ctgcaaacga
     2101 cgtcgatggt ctttttccga ctgggtagcg cggtgctgac caaagctgcg atggcccagc
     2161 ttgatcaact ttcatcgcag atcaccgacc ggcgcggctt tgtgctcgag atcgtaggct
     2221 t
//
LOCUS       DATILV010000895         2144 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3035669, whole genome shotgun sequence.
ACCESSION   DATILV010000895 DATILV010000000
VERSION     DATILV010000895.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2144
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3035669"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..527)
                     /locus_tag="VLJ17_21600"
     CDS             complement(<1..527)
                     /locus_tag="VLJ17_21600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25609.1"
                     /translation="MRFPYAEALNADNPKILLSFYSMPLWMDAFDISFDDEDVTFRRT
                     LFAYRSAAKDHVIHVREQLNAIDGPLTGKALLKELRDTGHWLRILPNWNWLGPISGAL
                     ADGSIIGEPGGGGIVTSQAATAKGGPITDEKGWVIRDAAGRPVVGTGGGSNAVVWFSA
                     GRWNPKHPFKSTGYQP"
     gene            747..1007
                     /locus_tag="VLJ17_21605"
     CDS             747..1007
                     /locus_tag="VLJ17_21605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25610.1"
                     /translation="MVRARTPLPPPRTRCTASPITTQECANDCEAVFFPLLAYEDRAP
                     ASLMWIGDDCYQGLVEVDTGRLRGRGGGGSVSPSGHATWVSS"
     gene            complement(1327..1806)
                     /locus_tag="VLJ17_21610"
     CDS             complement(1327..1806)
                     /locus_tag="VLJ17_21610"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008966533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004602 - glutathione peroxidase activity
                     [Evidence IEA];
                     GO_function: GO:0043295 - glutathione binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HSV25611.1"
                     /translation="MTSIYEYTARSLDDNEVALSDYRGKVLLIVNTASKCGFTPQYST
                     LEALYKEYQGRGLSILAFPCNQFGRQEPGSAPEIGAFCHRNYGITFPLFAKIEVNGSG
                     AHPLYQYLKNEKRGLFGTRTIKWNFTKFLIDRAGNAVARFAPNTTPPSLRPAIEKLL"
     gene            1917..>2144
                     /locus_tag="VLJ17_21615"
     CDS             1917..>2144
                     /locus_tag="VLJ17_21615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25612.1"
                     /translation="MSARPQTAAAFLEGGQLAFRATNCCRDRIGMMATSIPIGRYCPA
                     LAPHRQCHCEMPITQRRVESIVMSGANSHRGV"
BASE COUNT          411 a          623 c          657 g          453 t
ORIGIN      
        1 ggctgatatc ccgtactctt gaaggggtgt tttgggttcc atcggccggc actgaaccaa
       61 accaccgcat tgctgccccc gcccgtgcct acgacgggcc ggcccgccgc atcgcggatg
      121 acccagcctt tttcatcggt aatcggacca cccttggcgg tcgcggcctg cgatgtgact
      181 atcccaccac caccgggttc gccgatgatg gaaccgtccg caagcgcacc cgagatgggg
      241 ccgagccaat tccagtttgg cagtatccgg agccagtgac cagtatcgcg aagctccttg
      301 aggagggctt tgcctgtcag ggggccgtcg attgcgttca attgctcccg gacgtggatg
      361 acatggtctt tggcggccga ccgataggca aagagcgtgc gccggaaggt cacgtcctca
      421 tcgtcgaagg aaatatcgaa tgcgtccatc catagcggca tggaataaaa gctcagaaga
      481 atctttggat tgtcggcgtt gagcgcttcg gcgtacggga aacgcaattc gacgatattc
      541 cgaccccgcg catgcttgtc aacgtattcg acgtaggtcc ggtggggcca aaaagcccat
      601 agcacgctcc cacggtgtaa cggcggcgaa ccgcgcgcct tcgccaaggc cgcgttcatc
      661 tgatcataaa ttgctattag atttgtcgtt tcggctgagc aaagcgttcg atcacatatc
      721 gacggctgtt acccaggtga taacccatgg tacgggcccg cacgcccttg cccccgccgc
      781 gcacccgctg caccgccagc ccgataacga cacaggagtg tgcgaatgat tgcgaagcgg
      841 ttttttttcc gctgctcgcc tatgaggaca gggcgcccgc gtcactgatg tggatcgggg
      901 acgattgtta ccaaggtctg gtcgaggtcg ataccggtcg cctgcgaggc cgcggtggcg
      961 gcggctcggt gtcgccgtcg ggccacgcca cctgggtttc atcatagatg aaaggcatgt
     1021 tgcgtccccc gcgtaatcct ttgcctaccc tattttgcat tatttcgtga ttgtcgatcc
     1081 agaatacggc aattgtccgc tcgaaatcga gccggcgcag ccagtatggg taacgatgat
     1141 caccgcaaat cagcccgtag tctaatttct tgttgggcgc gccaatgttc cgccgtctcc
     1201 aggcgctata gccagtccga ggcatgggcg agcgcactga ttgcgggcgc ggatgggatt
     1261 gatatgggag ctctccatcg aagcattttc ttgaaagagc tgaaggaggc ttcattcccg
     1321 cgtcccctat aacagcttct cgatcgcggg ccggaggctc ggcggcgtgg tgttcggggc
     1381 aaaacgggcg accgcgttgc cggcacggtc gatcagaaac ttggtgaagt tccacttgat
     1441 ggtcctggtg ccgaacagcc cgcgcttctc gttcttcagg tattggtaaa gcggatgggc
     1501 gcctgagccg ttcacctcga tctttgcgaa taacgggaag gtgatgccgt agttcctatg
     1561 gcagaacgcg ccgatttccg gtgcagagcc tggctcctgg cggccgaact ggttgcaggg
     1621 aaaggcgagg atggagaggc cccggccctg atactccttg tagagcgcct ccagcgtgga
     1681 atattgcggg gtaaagccgc acttgctcgc ggtgttgacg atcagcagca ccttgcccct
     1741 gtagtccgac agcgccacct cattgtcgtc gagcgacctc gccgtgtact catagatgct
     1801 ggtcatgcga tcttccgtcg gtgagtatgg atgaggcggc gatcatagtc cgggcgaagc
     1861 ggttcacaac ccggtcagta atggatcaat cacgtcagat cagtggctcg gatgcgatgt
     1921 ccgcacgacc ccagacagcg gcagcgttcc tggagggcgg ccaattggcg ttccgggcca
     1981 cgaactgctg tcgcgaccgc attggtatga tggcgacctc aatcccgatt gggcggtact
     2041 gcccggcgct ggcacctcat cggcaatgcc actgcgaaat gccgatcacg cagcggcggg
     2101 tcgagtcaat cgtgatgtct ggcgcgaata gtcaccgcgg agtt
//
LOCUS       DATILV010000896         4341 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3543296, whole genome shotgun sequence.
ACCESSION   DATILV010000896 DATILV010000000
VERSION     DATILV010000896.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4341)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4341)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4341
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3543296"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            122..235
                     /locus_tag="VLJ17_21620"
                     /pseudo
     CDS             122..235
                     /locus_tag="VLJ17_21620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011082855.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
     gene            complement(408..980)
                     /locus_tag="VLJ17_21625"
     CDS             complement(408..980)
                     /locus_tag="VLJ17_21625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007605515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ada metal-binding domain-containing protein"
                     /protein_id="HSV25613.1"
                     /translation="MLDIEECERARVRRDRRFDGLFFSGVRTTRIYCRPVCPVRPAKA
                     ANVMFYPSAAAAELAGFRPCLRCRPEAAPFSPAWKGTRTTVERALRLIADGALDDGSV
                     ETLADRLGIGSRHLSRLFQMHLGASPVQVAQTTRVQRAKRFLDETDLTMSEIAVRAGF
                     GSLRRFNTVFAEVYRRPPTQIRRARKPSAT"
     gene            1130..2050
                     /gene="panE"
                     /locus_tag="VLJ17_21630"
     CDS             1130..2050
                     /gene="panE"
                     /locus_tag="VLJ17_21630"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016841407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008677 - 2-dehydropantoate 2-reductase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HSV25614.1"
                     /translation="MRVLIVGAGAIGGYFGGRMLQAGRDITFLVRPRRASELAAAGLV
                     IKSPNGDVTLKNPPVIQADTIKDKFDAVLLSCKAYDLDDAVKSFAPAVGERTAIIPLL
                     NGMRHLDVLDKKFGASHVLGGLCLTAVTLNEKREVVQLGPVQSLGFGERDGKMSDRVR
                     AIADVVRSCNFDGAASETVLQDMWEKWVFLASIAASTSLMRAPIGMIMAAPGGKDFLL
                     GILDECRAVATVEGYPPRAPALERATGMLTTEGSPLTASMFRDIKAGQPIEADHVIGD
                     LIARADTAKVPVPRLRTAYTHLKAYEQTRG"
     gene            2070..3350
                     /locus_tag="VLJ17_21635"
     CDS             2070..3350
                     /locus_tag="VLJ17_21635"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV25615.1"
                     /translation="MASRRPALRSGHPTLQIPELRQSRFQGWSVVWVAFVIAVFGWGV
                     GFYSPGVLLLTLHASKGWPVAMISSAITAHFLIGAALIVYLPEAHRSIGLAQTTIIGA
                     VLAGAGIVAWSVASAPWQLFVAAAISGSGWAATSGAAINAMVAPWFDRDRPKAIGLAF
                     NGASIGGVMFPPLLILLIAKIGVEAAAVAVGIAMPLVIIPLSIFYLRRDPKGLGLAPD
                     GLLIDSKPHVATPLTRSPRKDLIKTKGFMTLSVAFALALFAQVGLLTHLLTRISPLLG
                     ENGAAAAVSMVTTSAVLGRTLLGWTIGGRDRRLAASANFLLQSVGVALMIISDAPTVV
                     LVGCVLFGLGVGNVVSLPPLIAQHEFRAADVGTVVALVVAFNQAVFALAPAVLGVLRD
                     ISTSYVVPFALAAAMQIVAALIVLIRPPRRSASE"
     gene            3556..4317
                     /locus_tag="VLJ17_21640"
     CDS             3556..4317
                     /locus_tag="VLJ17_21640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011090902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HSV25616.1"
                     /translation="MRYELSDYEWTAIKPMLPNKPRGVRRVNDRRVLNGIFWVLRSGA
                     PWRDLPEVYGPRTTCYNRFVRWRRAGVWDQIMDALAAGHDAAVQMIDTSVVRVHQHGA
                     CVADNNHQDMGRSRGGLTSKIHAVVDTNGLPVHLALTPGEAHDNRLCSVLLSALLPRT
                     MLLADRGYDADWIRELARQQGAWANIPPKRNRKDPICFSPYLYRARNLIERFFNKIKQ
                     CRRVATRYDKLAANYLAFVKLASIRIWLRANESTP"
BASE COUNT          858 a         1317 c         1298 g          868 t
ORIGIN      
        1 tcagttgccg gccgcctaaa ctctaacccc tgatgagcca gacctccctt caacccctga
       61 tgagccagac ctcccttcgc aaaacgccta acgagtctca aatcatctga cgacgcacaa
      121 cctgcacaac ggaaacccga agcccttcaa atggaccaag tccgcagacc agattttggc
      181 ttctgtcaaa cgcttctgtc acaaagccca gcagacttta tgtggcgaac tttagattca
      241 cgtgactagg ccgtgaaccc ataaatctgc agggccgacg ccacgccaga gtccgctatg
      301 cctcgatagc cgacgtattg ctgcatagca gcgcaacgac gctatgtgcc aacaagagac
      361 gtgtgcgctc ggctgacgat ctgtccgctt caaccggaag ccgacgttta cgtggcactc
      421 ggtttgcggg cacgcctgat ctgcgttggc ggtcgccgat aaacctcagc gaacaccgta
      481 ttgaatcgcc gcaagctacc gaagcctgcg cgcacggcga tctccgacat cgtgagatcg
      541 gtctcgtcca gaaaccgctt cgcccgctgc acgcgtgtcg tctgggcgac ctgaaccggg
      601 cttgcaccga ggtgcatttg gaagagccgg gacaaatgtc tcgaaccgat cccgagacga
      661 tcggccaaag tctcgacact gccgtcatca agtgcaccgt ccgcgatgag ccggagcgca
      721 cgttcgacag tcgtgcgtgt tcccttccat gcaggcgaga aaggagcagc ctcgggcctg
      781 cacctcagac acggtcggaa acccgcaagt tcggccgccg ctgccgacgg atagaacatt
      841 acgttggccg ccttggcagg gcgcaccgga cagacagggc ggcagtagat acgtgtcgtg
      901 cgaacgccag aaaagaatag gccgtcgaag cgacgatccc gcctaacgcg tgcccgttcg
      961 cattcttcga tatcgagcat tgagttcctc gaggatagcc gacgacggag tccgattccg
     1021 gcgagcgcac agagtgcccc ttctggtatg tagatgtcca ggaacacagg agccgcggat
     1081 gagcaacgtt ctggacaatc cggtatccaa caacaagagg aattgagaga tgcgcgttct
     1141 catcgttggc gcgggggcca ttggcggata cttcggcggc aggatgctgc aagccggccg
     1201 cgacatcacc tttctggtgc ggccgcgccg tgcctcggag cttgccgccg caggcctcgt
     1261 gatcaaaagc ccgaacggcg acgtaacgct gaagaatccg cctgtcatcc aggccgacac
     1321 catcaaggac aagtttgacg cggtgctgtt gagctgcaag gcttacgacc tcgacgatgc
     1381 ggtcaagtcg ttcgcgccgg cggtaggcga gaggaccgcg atcatcccgc tgctcaacgg
     1441 tatgcgtcat ctggacgttc tcgacaaaaa atttggcgcg agccacgtgc tcggagggct
     1501 ctgcctgact gcggtgacac tgaacgagaa gcgcgaagtg gtccagctgg gcccggtgca
     1561 gtcgcttggt ttcggcgagc gcgacggcaa aatgtcagac cgggttcgcg ccatcgcgga
     1621 cgtcgtcaga agctgcaatt tcgacggcgc ggcgagcgag accgtcctgc aggacatgtg
     1681 ggagaaatgg gtgttcctcg cgtcgatcgc ggcctcgacc agcctgatgc gcgccccgat
     1741 cggcatgatc atggcggcgc ccggcggcaa ggacttcctg cttggcattc tcgacgaatg
     1801 cagggcggtc gcgaccgtgg agggctatcc gccccgcgcg cctgcgctgg aacgcgcgac
     1861 agggatgttg accacggaag gctcgccgct caccgcatcg atgttccgcg acattaaggc
     1921 gggccaaccg atcgaagccg atcatgtgat tggcgacctg attgcgcgcg ctgataccgc
     1981 aaaagttccg gtgccccggc tgcgcacggc ctacacgcat ctgaaggcct acgagcaaac
     2041 gcgcggttga tcgcgcatac ggcgcgtact tggcaagtcg tcgccctgcc ctcagatcag
     2101 gacacccaac tctgcagatc cccgagcttc gacaatcgcg atttcagggc tggtccgtcg
     2161 tttgggtcgc gtttgtaatc gcggttttcg gatggggtgt cggattttat agtccgggag
     2221 tgctcttgct gacgttgcac gcctccaagg gctggccggt cgcaatgatc tctagcgcga
     2281 tcactgcgca cttcctgatc ggggcagcac tgattgtgta cttacccgaa gctcacagat
     2341 caattgggtt ggcgcagaca acgatcatcg gcgcggttct cgcaggtgca gggatcgtgg
     2401 cctggtcagt cgcgtcagct ccgtggcaat tgttcgtggc ggcagcaatc tcggggagtg
     2461 gttgggcagc gacgagcggt gcggcgatca acgcgatggt cgctccatgg ttcgatcgag
     2521 atcgaccaaa ggccatcggc ttggcattca acggcgcaag catcggcggc gtcatgtttc
     2581 cgcccttgct tattttgctg atcgccaaga ttggggttga ggcggcggcg gtcgcggtag
     2641 gtatcgccat gccgctggtc ataatacctc tttcgatttt ttacctgcgc cgtgatccga
     2701 aaggactcgg tctggcgccc gacggactgc ttatcgacag caagccccac gtcgctaccc
     2761 cattaacgcg tagtcctcgc aaagacctca tcaagaccaa gggtttcatg acactttcag
     2821 tggccttcgc gttggcccta ttcgctcaag tcggactgct aacgcacttg ctgacccgaa
     2881 tatccccatt gctcggcgag aacggggctg ccgccgcagt cagtatggtg acgacatctg
     2941 ctgttttggg ccgcactctg ctaggctgga cgatcggagg ccgtgatcgc cgcctggctg
     3001 catccgcgaa ctttctcctc caaagcgtcg gcgttgcatt gatgatcatc tcagatgcgc
     3061 ccacggttgt actggttggt tgcgtgctgt ttggtctcgg cgtcggtaac gttgtttccc
     3121 ttcccccgct tatcgcgcaa catgagtttc gtgcggccga cgtcggtacg gtcgtcgcgc
     3181 tcgtggtggc gttcaatcaa gctgtctttg cgttggctcc tgctgtcctc ggcgtgcttc
     3241 gggacatttc gacgagctac gtggtgccgt tcgccttggc cgcggcaatg caaatcgtag
     3301 ccgcgttgat tgtgctcata aggcctccaa gaaggtcggc tagtgagtag atcttcggac
     3361 gaacccagcg gtggagccag tgcccgcgat gggtcaatcg ctacaggggc gacccagcgg
     3421 caaatctgac catgtcgcct atgcccccca aaaggggaag tagattgaga gctttagcgg
     3481 gttcgcgatc agctatcgcg gcttgatggc tccgcccgag acgtgattca atctccgaaa
     3541 ccggagcctc gaatcatgcg ctacgaactc agcgactacg aatggaccgc catcaaaccg
     3601 atgctaccca acaagccgcg cggcgttcgg cgggtaaatg accgtcgtgt gctcaatggc
     3661 atcttttggg tcctccgttc aggtgcgcca tggcgcgacc tgccagaagt ctatggtccc
     3721 cgcaccacct gttacaatcg cttcgttcgg tggcggcggg ctggcgtctg ggaccagatc
     3781 atggatgcgt tggctgccgg tcacgacgcg gcggtgcaga tgatcgatac ctccgtcgtg
     3841 cgcgtgcatc agcacggagc ctgtgtcgcg gacaacaatc accaagacat gggtcgctcg
     3901 cgaggaggcc tgacgagcaa gattcacgcg gtcgtggaca ccaatggcct gccggtccat
     3961 ctcgccctca cgcccggcga ggcgcatgat aaccggctgt gctcagttct cctcagcgcg
     4021 ttgcttcccc gaacgatgtt gctcgcagat cgtggctacg acgcggactg gatcagggag
     4081 cttgctcgcc aacaaggagc atgggccaac attccaccga aacggaatcg caaagacccg
     4141 atctgcttca gcccgtatct gtatcgcgcg cgcaacctga tcgaacggtt cttcaacaag
     4201 atcaagcaat gtcggcgcgt cgcgacccga tacgacaaac tggcggctaa ctatctggcg
     4261 ttcgtcaagc tcgcatcaat ccgaatttgg ctacgcgcta atgagtccac gccctaggta
     4321 gcgggcccga cagcacgaac a
//
LOCUS       DATILV010000897         1607 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2781958, whole genome shotgun sequence.
ACCESSION   DATILV010000897 DATILV010000000
VERSION     DATILV010000897.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1607
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2781958"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..474
                     /locus_tag="VLJ17_21645"
     CDS             <1..474
                     /locus_tag="VLJ17_21645"
                     /inference="COORDINATES: protein motif:HMM:NF016236.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MlaA family lipoprotein"
                     /protein_id="HSV25617.1"
                     /translation="QGKLKGAGIEVGRFLINSTVGVAGFFDLAKKVDLVTSEEDLGQT
                     LGFYGVKPGPYLVLPMFPPFTVRDFVGYVGDVFLNPINWLVVPIIEVNNVPSVIAHKN
                     RMTSSLIQTGSRVGEIVNERSRNLEKYQGVEEATLDLYTAVRNAYLQTRVRAIRE"
     gene            complement(551..>1607)
                     /locus_tag="VLJ17_21650"
     CDS             complement(551..>1607)
                     /locus_tag="VLJ17_21650"
                     /EC_number="2.3.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013532322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008890 - glycine C-acetyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycine C-acetyltransferase"
                     /protein_id="HSV25618.1"
                     /translation="NLCANNYLGLANHPDIRQAAAAGLQEHGYGMASVRFICGTQDLH
                     KQLEQAISTFLGTEDTILYSSCFDANGGLFEVLLGEQDAVISDALNHASLIDGIRLCK
                     ATRLRYAHSDMAELEARLRDAATCRLRLIATDGVFSMDGDLAKLDRIVELADRYDAAV
                     IVDDSHATGVLGRNGRGTPDHFGVADRIEIVTSTLGKTLGGAAGGLTSGRREIVELLR
                     QRSRPYLFSNSLPPVIAAAARRAVILVAQGDQLRARLRENAAFFRTQLTALGFRLIPG
                     EHPIIPIMLGDASLATRMAERLLEEGIYVVGFSYPVVPEGQARIRIQMSAAHTHEQLE
                     RASAAFATVGRELGVIS"
BASE COUNT          321 a          459 c          497 g          330 t
ORIGIN      
        1 cagggcaagc tcaaaggtgc cggcatcgaa gtcgggcggt tcctgatcaa tagcacggta
       61 ggagtggccg ggttcttcga cctcgcgaaa aaggtcgacc tcgtcacatc ggaagaagac
      121 ctgggacaga cgcttggatt ctatggcgtt aaaccaggcc cctatctcgt gttgccgatg
      181 ttcccgccct tcaccgttcg ggattttgtt gggtatgtcg gcgacgtgtt tctcaatccg
      241 attaactggc ttgtggtgcc gatcatcgag gtcaacaacg tgccttctgt cattgcccac
      301 aagaatcgga tgacgtccag cctgattcag acggggagtc gcgttggaga gatcgtcaat
      361 gaacggtcgc ggaatctcga aaagtatcag ggagtcgagg aagcgacgtt ggatctctat
      421 accgccgtgc gaaatgccta tctgcagacg cgtgtccggg caattcggga gtaaatgaaa
      481 cctggtttgt ttggttttga acgaaagaaa ccagatgacc caaatagacc agataaacca
      541 gacaaacgct tcacgagatc acgcccagtt cgcggccgac ggttgcgaag gcggcgctgg
      601 ctcgttcaag ttgttcgtgc gtgtgggccg ccgacatctg aatgcgaatt cgcgcctggc
      661 cttccggcac caccgggtaa ctgaacccca cgacatagat cccttcctct agaagccgct
      721 ctgccatcct agtggcgagt gatgcgtcac ccaacatgat cgggatgatg ggatgctcgc
      781 cgggaatgag tcggaacccg agcgcggtga gttgcgtgcg gaagaatgcc gcgttctcgc
      841 gcagcctggc ccgtaactgg tcgccttggg ccacgaggat cacggcccgt ctggccgccg
      901 cggcgatgac cggggggagt gaatttgaaa acaggtaggg tcgcgaccgc tgccgcaaca
      961 gctcgacgat ttcccttcgt ccggaagtta acccacctgc cgcgccgccc aatgtcttcc
     1021 ccagcgtgct ggtgacgatc tcgattcggt cggcgacgcc gaaatggtcc ggcgtgccgc
     1081 gcccgttgcg cccgagcaca ccggtcgcgt gactgtcgtc cacgatcacc gctgcatcat
     1141 accgatccgc caactcgacg atccgatcga gttttgcgag atcaccatcc atggagaaga
     1201 ccccgtccgt cgcaatcagg cgaagccggc aggttgccgc gtcgcgcaac ctggcttcca
     1261 gctctgccat atcggagtgc gcgtagcgga gcctggtggc cttgcagagc cggatgccgt
     1321 caatcaggct ggcgtggttc aaggcgtcgc tgatgacagc gtcttgctcg ccgagtagca
     1381 cctcaaagag tccgccgttg gcgtcgaagc aggaactata gagaatcgtg tcctcggtgc
     1441 ccaggaaggt gctgatcgcc tgttcaagtt gtttgtggag atcctgcgtg ccgcagatga
     1501 accggacgga ggccattccg tagccatgct cttgcagtcc ggcggcggcg gcctgtctga
     1561 tgtcagggtg gttggcgagc cccagatagt tgttggcgca gagattg
//
LOCUS       DATILV010000898         2186 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4314529, whole genome shotgun sequence.
ACCESSION   DATILV010000898 DATILV010000000
VERSION     DATILV010000898.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2186
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4314529"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(352..1755)
                     /locus_tag="VLJ17_21655"
     CDS             complement(352..1755)
                     /locus_tag="VLJ17_21655"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018645174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HSV25619.1"
                     /translation="MTDLIVATLEGTDAIVEEGAVQALRARLHGPLLRPDDAGYDEAR
                     KVWNGMIDRRPALIARCAGVSDVIAAVKFARTHEVLVSVRGGGHNAPGNAVCQGGLMI
                     DLGGMRSVRVDPIRRTARAEGGTTWGDFDRETQAFGLATTGGSVSDTGIAGLTLGGGL
                     GWLAGKYGLSCDNLLSIDLVTADGTVLLASATENADLFWGLRGGGGNFGVVTSFEYQL
                     HQVGPVLAGLVLYPFNKAKEALTLYRDFATSIPDEVNTIGGLLTSPEGEPVAAIAACY
                     NGSLKEGDKVLRSIKSFGPPLADHISPMSYCQAQTLLDAAAVRGRRYYVKTNMMQAIS
                     DDAIDAMIERFATIPSPHSLVFLQQLGNAANRVDASATAFSHRGALCEWGCQSSWLDS
                     AADDVNSRWTRELAETMRPFTTGSDYVNQIGLETEEGSERIKAAFGANYDRLVGLKNK
                     YDPTNLFRHNQNIRPTV"
BASE COUNT          446 a          677 c          629 g          434 t
ORIGIN      
        1 gtgatgcgga aaccagagag acgcgaagcc ggcatcacgc gccgcgcgca cctgtgcgac
       61 catctccggg acgcgttccg tgaggttgaa gcccgcgggg aactgcgtgt tgatgaacag
      121 accgaccttc atgactcgca ctttcctccg cgttctgcgc gcagcttact ctggatgtac
      181 aaggcccgaa tagtgcggga gaccgggacg cagtcaagct acggcccggc tattcacgtt
      241 aaacgtgtga ttgcccgcca accttgggac gcaacgagct gaggaagcag ccgccagcaa
      301 caaacgaaac cgttggtatt tgggccgcca cctctgcagc cgctgttgct gctacactgt
      361 cggtctgatg ttctggttat gacggaacag gttcgtcggg tcgtatttgt tctttaggcc
      421 cacaagccgg tcgtaattcg ccccaaatgc cgccttgatg cgctccgagc cttcctcggt
      481 ctcaaggccg atctgattga cgtagtcgct gccggtggtg aacggacgca tcgtctctgc
      541 cagctcacgt gtccaccggc tgttcacgtc atccgccgcc gagtccagcc aactcgactg
      601 gcaaccccac tcgcacaggg cgccgcgatg gctaaacgcc gttgcgctag cgtctacccg
      661 gttcgccgca ttgcccagtt gctggaggaa gacaagagaa tgcggcgagg ggattgtcgc
      721 aaagcgctcg atcattgcgt cgatcgcatc gtcgctgatc gcctgcatca tgttggtttt
      781 gacgtagtac cggcgcccac gcactgccgc ggcatccagc agcgtctggg cctggcagta
      841 cgacatcgga ctgatgtgat cggccagggg cgggccgaaa cttttgatcg agcgcaacac
      901 tttgtcgcct tctttcaggc tgccgttata gcaggcggcg atggcggcga ccggctcacc
      961 ctcgggcgaa gtgagcagcc cgccgatcgt gtttacctcg tcgggaatgc tcgtggcgaa
     1021 gtcgcggtag agtgtcagag cttcttttgc cttattgaac gggtacaaca ccagtccggc
     1081 gaggaccggg ccgacctgat ggagctgata ctcgaacgag gtcaccacgc cgaaattgcc
     1141 gccgccgccg cgcaagcccc agaagaggtc ggcgttctcg gttgcactcg ccagcaagac
     1201 tgtgccgtca gcggtgacga ggtcgatgga cagaagatta tcgcacgaaa ggccatattt
     1261 cccggcgagc cagccaaggc caccgcccaa tgtaaggccg gcgatgccgg tatcggagac
     1321 cgaacctccg gtcgtggcca gaccgaacgc ctgggtctcg cgatcgaaat ctccccaggt
     1381 ggtaccaccc tcggcgcggg ctgttcgccg tatcggatcg acgcggacgc tgcgcatgcc
     1441 gccaagatcg atcatcagac cgccttggca cactgcattg cccggagcgt tgtgcccgcc
     1501 gccacggacc gaaaccaaca cctcgtgggt gcgggcaaat tttaccgctg cgatcacatc
     1561 ggaaacgcca gcgcagcgcg caataagcgc cgggcgccgg tcgatcatgc cattccagac
     1621 cttacgcgcc tcgtcatagc ccgcatcgtc gggacggagc agcggaccat gcaagcgggc
     1681 tctcagagcc tgcaccgcgc cctcttcaac gatcgcgtcg gtgccttcaa gagtagcaac
     1741 tatcaaatcc gtcatcgccg tctcttccct gtttagtctg gtcagcatta caccttgtcg
     1801 ggatttggcc agctcaacca cgagccgact ctcttctcgg gaagaatact tgaccattat
     1861 atgatgttat cttgaaagtt agttcgacat gcttatatat tgtgaataat cgcgtgccaa
     1921 tttagaagga catcagctct tctagtcatt tggcacgagc aaaaccccaa aacacacttt
     1981 ctgtccagct cgtcgtgcac tagcgcgcct agctcggggc attggaagca tcaaacagga
     2041 gaatcccgat gcccaagttc gtaatcgagc gtcgcacaga tcaataaaat cgacaacgcg
     2101 gtcccgctca gcatcgtgcg ctgtggatcg cgagccgcat cgcccgtccg gcgaacaggt
     2161 tcgcatatga ctcgctgctg gaggga
//
LOCUS       DATILV010000899         2792 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1504976, whole genome shotgun sequence.
ACCESSION   DATILV010000899 DATILV010000000
VERSION     DATILV010000899.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2792
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1504976"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(94..606)
                     /locus_tag="VLJ17_21660"
     CDS             complement(94..606)
                     /locus_tag="VLJ17_21660"
                     /inference="COORDINATES: protein motif:HMM:NF025063.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
                     /protein_id="HSV25620.1"
                     /translation="MDLFVVPTIGFKLLYGFVIVRLNRRDLVWINVTTNPTAEWIARQ
                     ITEAFPWESAPGYMIRDRDRIYGAVVTRRLRAMGIRDKPIAPASPWQNGFAERLIGSV
                     RRECLDHVIVLGEAHLRRILKSYARYYNGVRTHRSLDKDTPDSRPVQRSGLISSHAIL
                     GGLHHHYARV"
     gene            complement(1003..2067)
                     /locus_tag="VLJ17_21665"
     CDS             complement(1003..2067)
                     /locus_tag="VLJ17_21665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009488951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HSV25621.1"
                     /translation="MPRSAETAVARTIGIDTGKNTLHMIGLDEKGAIVLREKVARTRI
                     AARFVNLPPCLVGIEAGMASHYVARELAGLGHEVKQVPPAYCKPFRQSHKNDFRDAHA
                     VAEAVERPSTRCVPIKTDGQLDLQALHRLRSRLIGNRTAAINQTRGFLLEHGIPVRQG
                     HHFLRQQLPQILATRTDVLSPRMVRIIGDLMTDWKYLDERIEGVTDEIEALAHADEGC
                     QQLITVPGIGPIISSAMVAAIGNGAAFCKGRDFAAWLGLVPKQRSTGDRTILGRITKR
                     GNRYLRMLFIQGARAVLLRPASWAKHGFGSWLTAATRRLHRNVLAVALANKLARIAWT
                     VLAQGRRYEARVEPRVEAAA"
     gene            complement(2118..2573)
                     /locus_tag="VLJ17_21670"
     CDS             complement(2118..2573)
                     /locus_tag="VLJ17_21670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25622.1"
                     /translation="MIGLLCFVVAVLASPFKSKIRLEAENAALRHQLVVLRRQVKGRA
                     HFTNNDRWFLVQMYRWFPSILEVVTIIRPETLVRWHRAGFRRFWRWKSRRRGGRPPVE
                     AELRALIRQMSTENQLWGAPRIHGELLKLGFSVAQSSVANGMDRPCSRP"
BASE COUNT          569 a          855 c          807 g          561 t
ORIGIN      
        1 ctcggctatc gatctcgctg cgaagcgcga caaaatcgat gggctttgtc aggagtgcct
       61 cggcaccgcc ttccaggtgt gtgtaccgaa aaatcaaacc cgcgcgtagt gatggtgaag
      121 tccgcccaag atggcgtgcg aactgatgag accggatcgc tgaaccggcc gagaatccgg
      181 cgtatctttg tctagagacc gatgtgttct gacgccatta tagtagcgag cgtaagattt
      241 cagaattcgg cgcagatgtg cctcgcccaa aacaatgacg tggtccaaac actcgcgccg
      301 gaccgatccg atcagccgtt cggcaaagcc gttctgccaa ggtgaggctg gtgcaatcgg
      361 tttgtcccga atgcccatgg ctcgcaatcg gcgtgtgacg acggcgccat agatccgatc
      421 gcgatcacgg atcatgtaac ccggagcact ctcccaagga aacgcctcag tgatctgtcg
      481 tgcgatccac tccgccgtcg ggttggttgt gacgttgatc cagacgagat ctcggcgatt
      541 aagccgtaca atcacgaagc catacagcag tttgaagcca atggtcggga ccacgaacaa
      601 gtccatggcg gcaatgtccg gagcgtggtt tcgcagaaag atccaccatc cctggctggg
      661 aggtccacgt cgtttcacca tgtacttttg tatggaccgg ccgtgcggtg caagccggat
      721 gtgacgatct ggagataatt ggtctcgcgc atctgtattc ggcccattgc agggagcgtt
      781 tcttgcttcc tggccatcat ggatatccgc gcgcatccga tctcattcgc gacaaggccc
      841 tggaaggccg taagtacatc aagatcacgg atgcgacggt gataccgttt ctccatttcc
      901 tcaacccaac tcgcagacct cggcaggaat cgttcggttt tgtcgccgct gaccttagcg
      961 gtccatcttg ggcgctccct cgatggtttc agctatactt aattacgccg ccgcttcgac
     1021 acgcggctca acgcgagcct catagcgacg tccctgcgcc aacacggtcc aggcgatccg
     1081 cgccagcttg ttggcgagcg caactgccag aacattgcga tgcaatcgcc gcgttgcggc
     1141 ggtgagccac gagccaaagc cgtgttttgc ccaacttgcc ggtcgcagaa ggacggcgcg
     1201 ggcgccctgg atgaagagca tgcgtagata gcggtttccg cgcttggtga tgcggccaag
     1261 gatggtgcga tcacccgtcg acctttgctt cggcaccaaa ccgagccagg cagcaaagtc
     1321 acgtcctttg caaaaggcag cgccattgcc gatcgcagcc accatcgcac tcgagatgat
     1381 ggggccaatt cctggaaccg tgatcagctg ctggcagccc tcgtctgcat gcgccagggc
     1441 ctcgatctca tccgtcaccc cttcgatgcg ctcatcgaga tacttccaat cggtcataag
     1501 gtccccaatg atcctgacca ttcggggcga tagcacatcg gtccgcgtcg ccaggatctg
     1561 cggcagctgc tgtcgcagga aatgatgccc ctgccgaacc gggatgccgt gctccaacag
     1621 aaagccgcgg gtctgattga ttgcagccgt gcgattgccg atcaggcgag accgcaggcg
     1681 atgtaacgcc tgcagatcca gttggccatc ggtcttaatc ggaacacagc gcgtcgaagg
     1741 gcgctctaca gcttctgcga ccgcgtgcgc atcccggaag tcgttcttgt gactttgccg
     1801 gaacggtttg caataggctg gcggcacctg cttgacctcg tgaccgagcc cggccagctc
     1861 acgcgccacg tagtgagatg ccatgccggc ttcgatgccg acgaggcacg gcggcaggtt
     1921 cacaaatcgt gcggcgatcc gggtccgagc gaccttttcg cgtagaacga tggcgccttt
     1981 ctcatccagg ccgatcatat gcagcgtgtt cttgccagta tcgataccaa tggtacgtgc
     2041 gactgcagtc tctgcgctgc ggggcatagc gtgtcctcct cgtgctcttt ggaagcccca
     2101 tctgattctg cgtgccgtta ggggcgggag cacggccggt ccatcccatt cgcgacgctt
     2161 gattgagcga cgctaaaccc aagtttgagc agttcgccgt ggatacgtgg cgcgccccaa
     2221 agctggtttt ccgtgctcat ctgccggatc agcgcgcgca attccgcctc gaccggcggt
     2281 cgccctcccc gtcgacgcga tttccaacgc caaaagcggc gaaagccggc ccgatgccaa
     2341 cgtaccagcg tttcgggtcg gatgatcgta acgacctcca ggatcgacgg aaaccatcga
     2401 tacatctgga cgaggaacca gcgatcgttg ttcgtgaaat gagcgcggcc cttcacctga
     2461 cgtcgcaaga ccaccagttg atgtcggagc gcggcattct cagcctcaag ccggatcttc
     2521 gacttgaatg gtgaggccaa gaccgccacg acgaaacaca ggagcccgat cattccgcca
     2581 gcttaggcga ttccatcacg tcagcaactc ggataaggtt ttcggtacac acaggcaaaa
     2641 ggtgacagac gcgccgcggc ctcacgggcc tcagcatcgc gtcccagatg ggcggaagcg
     2701 ggcacgagcg tttcgccatt ccgcggaccc gcagcgcgtg acgacaagcc ttctgcgacc
     2761 gaacatctcg cgtttgcgag acaccacttg gc
//
LOCUS       DATILV010000900         4042 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3804505, whole genome shotgun sequence.
ACCESSION   DATILV010000900 DATILV010000000
VERSION     DATILV010000900.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4042
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3804505"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            416..2014
                     /locus_tag="VLJ17_21675"
     CDS             416..2014
                     /locus_tag="VLJ17_21675"
                     /inference="COORDINATES: protein motif:HMM:NF028467.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MASE4 domain-containing protein"
                     /protein_id="HSV25623.1"
                     /translation="MKNSAPSPDDQELILSNVSPSPAQRRLALGVVLVLLVCSVGLAG
                     PLSTQPLGRIDAFVPAYGTAIFVSDSITAVLLFAQFSVLRSPALLALASGYLWSGFIA
                     IPWVLTFPSVLPQAGPSGTGLQNTPWFYIFWHEGFIFSVIVYVLLKDFDPLKTLSKTG
                     LRGAVLASIASVAVLVVGATVTAGHALMPPIMLDTAPVDQLFYLLGPLYAMAIVAFVL
                     LWLRLRSVLDLWLVVIVFAFIIEVTLSVFPSPARFTAGWYGSRVYALLYSSLVLVMLL
                     IETTKLYGRLLDAVLAQRREHQVRQVAMDAMAAGMAHELKQPLAAIANYGNAGFRFIA
                     MSDLDEARACFEGVVGSAHRASEVIDGIRSLYKKDIRARAWLDVNELVHDVLRMVDAD
                     LRTQQVSVSIDLRDRLPPLLANRAQLEEVLLNLITNAIEAMDALTDRARLLQIRSDII
                     QERSAVVVTIEDSGTGIDDKNKDRIFEPFFTTKSKGMGIGLGICRAIIELHNGNLHAS
                     ANDPYGTIFYVVLPTGGVVGLENR"
     gene            complement(2169..2780)
                     /locus_tag="VLJ17_21680"
     CDS             complement(2169..2780)
                     /locus_tag="VLJ17_21680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006472001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI/OmpD-associated family protein"
                     /protein_id="HSV25624.1"
                     /translation="MAETKTPILSFKEVAAIEAYMLREPAESNGFWLKLSKIGARETT
                     ISKDEAIEAALCCGWIDGQLAKFDEHHFLVRMTPRRSGSRWSAKNRGTAERLARKGRV
                     KAAGLGQIAQAKADGRWDAAYQSQGKAEVPSDLLAALVRNAKAARFFETLDRANRYAM
                     IYRINDAKRRETRSKRIAQYVDMLARGETIHPQKSAKGRPRAS"
     gene            complement(3463..3894)
                     /locus_tag="VLJ17_21685"
     CDS             complement(3463..3894)
                     /locus_tag="VLJ17_21685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009802164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25625.1"
                     /translation="MRRGGGGFVGLGFLCWLLFALAVQALPLFVGVTAGFAAYHSGSG
                     EIGAMLVGLIAGAVTLAAGQIAIATVCSPLVRAAIALLFAAPAAVAGYHAALGLAGIG
                     VPAEGWRQAFALIGATAVGATAWVRMAPSAPPDTRSATPPA"
BASE COUNT          792 a         1202 c         1189 g          859 t
ORIGIN      
        1 ccgcctatgg cacgtccgtt taccctcgga tagccgccgc aatgctgcga ggcggcagat
       61 ttcagccttg agccagcaag agacactccg gcctctttcg aaggcgcggg agattgttgt
      121 aggttcaatc ctgagctgcc agcaagacgt gccgatgtcc gatgaattga acggcagcct
      181 cagtgcccac ggtgggcgag cgttgaaaag caatctcact tatggatact gggaggaatt
      241 ggcgcgcgca gcaccccagt gacggacgcg gcggctgccg ggcgtgtctg gcggagatcg
      301 gccagtcggc gctactcaat caccggcatg gctagtatta ttgcgatcct acgccggata
      361 ctgactcgtc cacagtggtc acattgcacc tctacctgga agactcgcct cggtcatgaa
      421 aaactcggcg ccctccccag acgaccagga gcttatcctc tcgaacgtat cgcccagccc
      481 cgcgcaaagg cggctcgcgc ttggcgtcgt gctcgtgctg ctcgtctgct ctgtcggctt
      541 agcaggccca ctctcgaccc aaccgttggg tcggatcgac gctttcgtcc ctgcctacgg
      601 cactgctatt tttgtcagtg actcgatcac cgcggttttg ctgttcgcgc agttttccgt
      661 cctgcgttcg cccgcgctcc tcgccttggc aagcggctat ctctggtcag ggttcatcgc
      721 aatcccttgg gtactcacat ttcccagcgt ccttccgcaa gcaggtccat cgggcactgg
      781 ccttcagaat acgccgtggt tctatatttt ctggcacgaa ggcttcattt tttccgtgat
      841 cgtctacgtc ttgctgaagg attttgatcc gctcaaaacg ctttcgaaaa ccgggcttcg
      901 tggggcagtc cttgcgagca tcgcatcagt tgccgtactc gtcgtgggcg cgaccgtcac
      961 agccggccat gcgctcatgc cccccatcat gctcgatacg gcaccggttg atcagttatt
     1021 ctatttactc ggaccgttgt acgcaatggc catcgtcgcg tttgtcttac tatggctgcg
     1081 cttgcgctcg gtgcttgacc tgtggctggt ggtgatcgtg tttgcattta ttatagaagt
     1141 tactctaagt gtttttccta gcccggcccg ctttaccgcg ggctggtatg gatcgcgagt
     1201 ctatgcactg ctctacagca gcttggtgtt ggtcatgctg ctgattgaaa cgacgaagct
     1261 gtacggccga ctgctcgacg cggttctcgc tcaacgccgc gaacaccagg tgcggcaggt
     1321 cgccatggat gcaatggcgg ccggcatggc tcacgagctc aaacagcctc tggcagcaat
     1381 tgccaactat ggcaatgcgg gcttccgttt catcgcgatg tccgacctcg atgaagcacg
     1441 cgcctgcttt gaaggtgtgg tcggcagcgc tcatcgtgcc agcgaagtga tcgatggcat
     1501 ccgctcattg tacaagaagg acattcgtgc acgagcatgg ctcgatgtga acgaactcgt
     1561 ccacgacgtt ctcagaatgg tcgacgccga tttgcgaact caacaagtat cggtttcaat
     1621 cgacctccgc gacagactgc ctccattgct tgccaatcga gcacaattgg aagaagtttt
     1681 gctgaatttg attacaaacg cgatcgaagc gatggacgct ctgacagatc gcgcgcgcct
     1741 gttgcagata agatccgata tcatccagga gcgttcggct gttgtggtca ccattgaaga
     1801 ctccgggacg ggaatagatg ataaaaacaa agatcgtata tttgagccct tcttcaccac
     1861 aaaatccaag ggaatgggaa taggcctcgg catctgccgg gcgatcatcg aattacataa
     1921 tgggaatctt catgcatctg ccaacgatcc ttacgggacg attttttacg tcgttttgcc
     1981 gacgggcggc gtcgtgggcc tagagaatcg ctgatggccg gtttgggtca tgggccgcct
     2041 tcctcgcaat gttggcagca cgacagctgt accccagata gccaccgtgc agcttcgagg
     2101 cccgagtggg cagcctcggg ccagattcgg aagtgaggcg ggctatcggc tttccacgtc
     2161 tgacctgctc agctagccct gggccgaccc tttgcggatt tttgagggtg gatagtctcg
     2221 ccccgagcta acatgtcaac atattgcgcg atgcgcttgc ttcgcgtttc tcgccgcttg
     2281 gcatcgttga tgcgatagat catcgcgtag cggttcgcgc gatccaatgt ctcaaagaag
     2341 cgcgcggctt tggcgtttct caccaacgcc gccaggagat cggaaggaac ctctgctttc
     2401 ccctgcgact ggtaggcagc atcccaccgc ccatcggcct tggcctgtgc tatctgcccc
     2461 agaccagccg ctttcacgcg ccccttgcgc gccagacgtt cggccgtccc gcggtttttg
     2521 gctgaccaac ggctgccgga tcggcgggga gtcattcgga cgaggaagtg gtgctcgtcg
     2581 aacttcgcga gttggccgtc gatccatccg cagcaaagcg ccgcttcgat ggcctcatcc
     2641 ttactgatcg tggtttcgcg agcgccgatc ttggagagct tgagccaaaa gccgttcgac
     2701 tctgcaggtt cacggagcat atacgcttca atggcagcaa cttccttgaa ggataggatt
     2761 ggagtctttg tttctgccat acggtctacc tcgcctccgt caggctacaa tcgacaaggc
     2821 ttgtgccgct tgtaaaaacg cgcatcctcg agtcaatagc ggccagggct cacgccagtc
     2881 acgcgcttga agtcccgcgt gaaatgagct tggtcaaagt aaccgagttc ctgcgccaac
     2941 gcggacaggt tcacatcgga gccgacaccg agtcgcgcca acgcatcctg aaggcggaag
     3001 catcggatca accatttcgg cgaaacgccg agcgcacgct ggcaaatatc ctggacggaa
     3061 cggaccgaga acctaagcgt gtgggcgagc cgcgatacaa acttggcgcg cgccggcggc
     3121 gaagtttttt aagggcgaga tcatcgtcgg aaaagagttg atggttgtgt gagtggctct
     3181 gggatcatgt cgtctaaggg tcagtcagag acactccagc atgtcagcgg tggcggcagc
     3241 tttccccgga agcagccatc gcggcccttt cccgaaccga ggacggcgct gcgtcgcgga
     3301 caccggtcgg tcggctgaag acatcgctgc cgtttgatcg aagcgttgtt cggaccgtgt
     3361 gtgtcgcggt ggaaattggc gactgaatat ctgccagacc cctaaccgac gaaccgataa
     3421 ctcaggcgtc cttggccgcg gacgccaggg aaaccggaga cttcaagccg gcggcgtcgc
     3481 cgatctggta tcgggcgggg ccgagggcgc catgcgcacc caggcggtgg cgcccaccgc
     3541 agttgcgccg atcagcgcga aggcctgtcg ccatccctcc gccggcacgc cgatccctgc
     3601 aaggccaaga gccgcgtgat agcccgcgac cgcggccggc gcggcgaaga gaagcgcaat
     3661 cgcggcacgg acaagtggcg agcagacggt tgcaatggcg atctgtccgg ccgcgagagt
     3721 gacggcgccg gcgatcaggc cgacaagcat cgcgccgatt tcacccgatc cgctgtggta
     3781 ggcagcgaac cccgcggtga caccaacgaa aagcggaagg gcctggaccg cgagcgcgaa
     3841 cagcagccag cacagaaacc cgaggccgac gaagccacca ccaccacggc gcaagcatgg
     3901 aaaattgcaa atccttgcgg catttggaat cccctactgt tgagggcgtt gtttggtgca
     3961 gcgcggctgg tgcacatgac attgccacac ggtcgccgcc gtcggctgca aggtctgctg
     4021 cggctattca ccggaaattg cg
//
LOCUS       DATILV010000901         3111 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_476904, whole genome shotgun sequence.
ACCESSION   DATILV010000901 DATILV010000000
VERSION     DATILV010000901.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3111)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3111)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3111
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_476904"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..349
                     /locus_tag="VLJ17_21690"
     CDS             <1..349
                     /locus_tag="VLJ17_21690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014498564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25626.1"
                     /translation="EAAQAAGVDALVAIYHVDHRELCAHERDWPFRIINILDVVGASM
                     GLHHTDHFKRLKIMQDADAIVADCKDMLATHRIDPAVAREIVVKAMLSEQPLPLAGPR
                     VDGARYAAYMPRP"
     gene            522..1580
                     /gene="argC"
                     /locus_tag="VLJ17_21695"
     CDS             522..1580
                     /gene="argC"
                     /locus_tag="VLJ17_21695"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HSV25627.1"
                     /translation="MATKAKIGVLGASGYTGGELVRMLLRHPRAQIVLLTAERSAGKA
                     MRDVFPQFSPFALPQLVAIDGLDWAKVALDVAFCALPHATTQKVVKELLKQSSATKVV
                     DISADFRLADTAAYAKWYGHEHHAPELQKEAVYGLAEIHRREIKKARLVANPGCYTTC
                     AQLPLIPLIKNKAIELDEIVIDAKSGMTGAGRAAKEAMLFSEVAEGFHAYGVGHHRHM
                     AELDQEFSLAAGREVIVTFTPHLVPMNRGILSTIYVRGRRGRTPEDLHAILLKSYMKE
                     PFVHVLQFGETPQTRHVRGSNMTFIGVAKDRIPGRAIVISALDNLVKGASGQAIQNMN
                     LIMGWSETMGLEQVALFP"
     gene            1628..>3111
                     /locus_tag="VLJ17_21700"
     CDS             1628..>3111
                     /locus_tag="VLJ17_21700"
                     /EC_number="1.3.8.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013215626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003995 - acyl-CoA dehydrogenase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isovaleryl-CoA dehydrogenase"
                     /protein_id="HSV25628.1"
                     /translation="MFEVQNQPPPLEPYNLFASDVVLREAVKREGASWADRELNSLGA
                     RLGQPETVQLGFDANKFTPQLRTLDRYGHRLDEVEFHPAWHELLGIALKAGLHSSPWA
                     DPKPGAHVARAAGTYMLGQIESGVYCPVAMTYGSVPTLRHAPAIASEWLPRIFSRDYD
                     QRFCPARQKKSALVGMGMTENQGGSDLRTNTTRAESTKDGSFRLHGHKWFMSAPMCDA
                     FLVLAQTPKGLSCFLMPRWTPDGDRNSIQILRLKDKLGNRSNASSEVEFHGAYAQLVG
                     EEGRGIPTIIEMGNYTRLDCCIGSSALMRQAVAQAIHHARHRIAFQKKLIDQPLMTNV
                     LADLALESEAATILTMWLARAYDESSETAHIIRRVITPAAKFWICKRTPFVTYEAMEV
                     LGGSGYIEESMMPRLYREAPVNSIWEGSGNIMCLDVLRAMERTANASEALRQELGGGQ
                     DARLKAFTDQLEKRLAARERNDETQARALVRELVLALQAALLIKR"
BASE COUNT          631 a          909 c          955 g          616 t
ORIGIN      
        1 tgaggccgcg caggccgcag gcgtcgatgc gctggtcgcg atctatcacg tcgaccaccg
       61 cgaactatgc gcacatgaac gcgactggcc gttccgcatc attaatattc tcgacgttgt
      121 tggagcaagt atgggcttgc accacaccga tcatttcaag cggctgaaga tcatgcagga
      181 cgccgatgcg atcgtggccg actgtaagga catgcttgcg acccatcgca ttgacccggc
      241 ggtggcacgc gaaatcgtag tcaaggcgat gcttagtgag cagccactgc cgctggccgg
      301 gccccgagtt gacggggcga ggtacgcggc ctatatgccc cgtccatgac gatgctcgtt
      361 gcagcaaaaa gggttcgccg ccgccgtgcc atcccggcac gggcgtagcg ttatcgtcac
      421 ccgtgccgcc ggatttgggc cgcggcacat gattttaatc aaaccatcgc tgttggcctt
      481 cttccggtag ttctttaaga cttctggata aggatcgatt catggcgaca aaagcgaaaa
      541 tcggcgtgct gggtgcctcg ggctataccg ggggcgagtt ggtgcggatg ttgctgcgcc
      601 atccccgcgc gcagatcgtc ctgctcaccg ccgagcgtag cgccggcaaa gcaatgcgag
      661 atgtatttcc gcaattctcg ccgtttgcgc tgccgcagct tgttgccatc gatgggcttg
      721 attgggcgaa ggtcgctctt gatgtcgcgt tttgcgcgct gccgcatgcg actacgcaga
      781 aggtcgtgaa agagctgctc aaacaatcgt cggcaaccaa ggtggtcgat atctctgccg
      841 actttcgcct ggcggatact gccgcctatg cgaaatggta cggccacgaa catcatgcgc
      901 cggagctgca gaaagaagcg gtctatggtc tcgccgaaat ccatcgacgc gagatcaaaa
      961 aggcgcggct tgtcgccaat cccggctgct acaccacgtg cgcgcagctg ccgctgatcc
     1021 cgctgatcaa gaacaaggcg atcgaactcg acgagattgt gatcgacgcc aagtccggca
     1081 tgaccggggc agggcgagcg gccaaagaag cgatgctgtt ctcggaagtc gcggaaggct
     1141 tccacgctta tggcgtgggg catcaccggc acatggctga gctcgaccag gaattttcgc
     1201 tagcagccgg gcgcgaggtg atcgtcactt tcacgcccca tctggtgccg atgaaccggg
     1261 gtattttgtc gactatttat gtacggggcc ggcgcgggcg gacacccgaa gaccttcatg
     1321 cgatactttt aaagtcgtac atgaaggaac ccttcgtgca tgtcctgcaa ttcggcgaga
     1381 cgccgcagac gcggcatgtg cgcggttcca acatgacttt cattggcgtt gccaaagacc
     1441 gcattcctgg acgtgcgatc gtcatctcgg cgctcgacaa tctggtcaag ggcgcttcgg
     1501 gccaggccat ccagaacatg aacctcatca tggggtggtc ggaaacaatg gggctggagc
     1561 aggtggcgct gttcccctga ttcgactggt acaatggcag tgtctttgcc gggagacttt
     1621 tgcccagatg ttcgaggtgc agaaccagcc accgccgctt gagccgtaca atttattcgc
     1681 gagcgatgtc gttctgcgtg aggcggtcaa acgtgagggg gcgtcctggg cggaccgcga
     1741 actgaactcg ttgggcgcaa gactgggtca gccggaaacc gtccagcttg gcttcgatgc
     1801 caacaagttc acgccgcaat tgcgcacact cgaccgctac ggccaccggc tcgacgaggt
     1861 cgaatttcac ccggcctggc atgagctgct tggcattgcg cttaaagccg gcctgcactc
     1921 gagcccctgg gcggacccga agcccggcgc ccatgtggcg cgcgcggccg gcacatacat
     1981 gctggggcag atcgaaagcg gggtctattg cccggtcgcg atgacttacg ggtctgtacc
     2041 gaccttgcgt cacgctccgg ccattgcttc ggaatggctg ccgcgaattt tctcgcgcga
     2101 ttatgaccag cgcttttgcc cggcgcgcca aaaaaaatca gcgctcgtcg gcatgggcat
     2161 gaccgagaac cagggcggct cggatttgcg caccaacacc acgcgagcgg agtccaccaa
     2221 agacggcagc ttccgtctgc acggccacaa atggttcatg tcggcaccca tgtgcgatgc
     2281 tttccttgtc ctcgcgcaaa caccgaaagg ccttagctgc tttctgatgc cgcgctggac
     2341 gcccgatggc gaccggaatt ctattcaaat tctgcggttg aaggacaagc ttggaaatcg
     2401 ctccaatgca tcgagcgagg tggaatttca cggcgcctat gcgcaactcg tcggcgaaga
     2461 aggacgcggt atcccgacca tcatcgagat gggaaactat acgcggcttg attgttgcat
     2521 aggctcttca gccctgatgc gacaggcagt tgcgcaggca atccatcacg cccggcaccg
     2581 cattgccttc cagaaaaagc tgatcgatca gccattgatg accaacgtgc tggccgatct
     2641 cgcgctcgag tcggaagccg cgaccatact cacgatgtgg cttgcccggg cctatgacga
     2701 aagtagcgag actgcgcaca tcatccgccg ggtgatcacc ccagcagcga aattctggat
     2761 ttgcaagcgt acgccgttcg tgacttacga ggcgatggag gtcctgggcg gctctggcta
     2821 catcgaggag agcatgatgc cgcgtcttta ccgcgaagcg ccggtcaatt cgatctggga
     2881 aggctccggc aacatcatgt gcctcgatgt actgcgtgca atggagcgca cggcgaacgc
     2941 aagtgaggcg ctgcgccagg agcttggcgg cggccaggat gcgcgattga aagctttcac
     3001 ggatcagctg gaaaaacggc tggccgcgcg cgagcgtaat gacgagacgc aggcgcgcgc
     3061 tctcgtacgc gaactggtgc tggcgcttca ggcggcattg cttatcaagc g
//
LOCUS       DATILV010000902         3322 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_476987, whole genome shotgun sequence.
ACCESSION   DATILV010000902 DATILV010000000
VERSION     DATILV010000902.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3322)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3322)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3322
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_476987"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1257)
                     /locus_tag="VLJ17_21705"
     CDS             complement(<1..1257)
                     /locus_tag="VLJ17_21705"
                     /inference="COORDINATES: protein motif:HMM:NF020110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSV25629.1"
                     /translation="MKAIPLKSLQARLALRLAVLYVVATAMGVGILIYQAYDTANTLN
                     DRELSLRAADLARYVTIDSVGAARLELPAQLAASYQAAGNIDIFAVRTGSDAVLAASP
                     PGFGEFAAKWPTGTDEPSYFHLKDFGSEGREYYGLTVVQSSAAGPVSISVARAANADI
                     LVHSLLREFVLDIGWLIPLLVMVTLVVGALAIRSAFGPIAEVSRMAAAITPGAMSIRL
                     PEKNLPSEITPLVTAVNHALDRLEQGFDVQRQFTANAAHELRTPLAIITAALDTVEEN
                     GEITKIKADVARMNRLVDQLLRVARLDAVALDVSDRLDLNNVAADMVGSMAPWSLAKK
                     KSIVLHGEDKPVLVKGNRYAIGDAIRNLIENAVAYTAPGSEVTVSTYANGSISIADRG
                     PGIPRDQRECVFQRFWRGKGRGSAGAG"
     gene            complement(1254..1931)
                     /locus_tag="VLJ17_21710"
     CDS             complement(1254..1931)
                     /locus_tag="VLJ17_21710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013946148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV25630.1"
                     /translation="MRLLVVEDETRIAELVQGALTRIGFTVDTVALRSEALAALTVTS
                     YDAAIVDLGLPDGDGLSLLGELRAGGNLTPVLVLTARDAVDDRVRGLDTGADDYLVKP
                     FAMTELIARTKALLRRPGGALGVVLKTGNISFDTVARDVSIAGIPLVLPRRESAILEH
                     LMRRLGRVVPKSVFEEKLYGLDDDHESNTIPVHVHHLRRKLVDAGATAEIHTVRGVGY
                     LLTESSS"
     gene            2214..3200
                     /locus_tag="VLJ17_21715"
     CDS             2214..3200
                     /locus_tag="VLJ17_21715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25631.1"
                     /translation="MAEFPRVDEALGASERQKNQARQSLYRVMNSRRAVETAYASGNS
                     AEARTRFQQARSSWNNISPVISAREAREAQLSFPIPRQSVEERRSGDLGPIDGIGMLE
                     ELREDHDLNPNAPRAVLVADDPPLILADKPTINLDDDNPRNVMFLLCNSCSERGKTLI
                     VAAHDNYAMHAPDATSEMLLALQRVANVACEIPSTELLPQSRPRTHKTTLNKAMYRPA
                     LLATTCALTLTTCRQFTLLGPRGSDLPTRRQPKHHVQQFQPALVAGARTHDVVKRDSL
                     LRKSSASEWCPKASRALGRLLASLQAARPANFFFRQIEPTGPPRGLNRNVDK"
BASE COUNT          740 a         1012 c          900 g          670 t
ORIGIN      
        1 accggctccg gctgagcccc tcccctttcc ccgccagaat cgttggaata cgcactctcg
       61 ctgatctcgc gggatccccg gcccacgatc cgcaatgctt atgctcccat tggcatacgt
      121 gctgaccgtt acctcgcttc ccggagcggt ataggcaacg gcgttctcga tcagattcct
      181 tatcgcgtcg ccaatcgcat accggtttcc tttgacgaga accggtttat cttcgccatg
      241 gaggacgatc gacttctttt tggcgagcga ccacggcgcc atgctcccaa ccatatcggc
      301 ggccacatta ttcaggtcga gtcgatcgga aacgtcgaga gccacggcgt caagccgggc
      361 gacgcgcaga agctgatcca ctagcctatt catgcgcgcg acatcggcct tgatcttcgt
      421 aatctctccg ttttcttcaa cagtgtcgag tgctgccgtg atgatggcga gcggcgtacg
      481 caattcgtgg gcggcattcg ccgtgaactg ccgctgaaca tcaaatcctt gctcaaggcg
      541 gtccagcgcg tgattgacgg cggtgacgag cggcgtgatt tcgcttggta gattcttctc
      601 aggcaatcgg atcgacatgg cgccgggagt gattgcggcg gccatccgag agacctccgc
      661 tatcggtccg aacgcacttc gtattgccaa tgcgccaacg acaagggtaa ccatgaccag
      721 caatggaatg agccagccta tgtccaacac aaattcacgc aacagggaat gaaccagtat
      781 gtcggcattc gcagcacgcg cgaccgatat ggaaacaggg ccagcggcac tgctctgcac
      841 cacagttaaa ccatagtact cacgcccctc cgaaccgaag tccttgagat gaaaatagct
      901 gggttcgtct gtccccgttg gccacttggc cgcaaattcg ccgaaacccg gcggcgaggc
      961 tgccaggacg gcatcggagc cggtgcggac cgcgaagatg tcgatattgc cggccgcttg
     1021 gtagctggcg gcgagttgcg ccggcagctc aaggcgggca gccccaacgg aatcgatcgt
     1081 aacgtatcgc gcaaggtcgg cagcccgtaa gctgagctcg cgatcgttta gcgtatttgc
     1141 cgtgtcgtag gcttgataaa tcaggatacc gacgcccatt gccgtcgcca ccacgtacag
     1201 cacagcaagg cgaagcgcca accttgcctg cagcgacttg agcggaatcg ctttcatgag
     1261 ctgctttcgg tcaagaggta tccgacgccg cgtacggtgt gaatctcggc tgttgcaccc
     1321 gcgtccacca atttgcgtcg aaggtgatgc acgtgaacgg gaattgtgtt tgactcatgg
     1381 tcgtcatcaa gcccatacag cttttcctca aagacggact ttggcacaac gcgaccaaga
     1441 cgccgcatca agtgttccag gattgcgctt tcgcggcgcg gcaagaccaa tggaatgccc
     1501 gcaatgctga catcgcgtgc gacggtatcg aagctaatgt tgccggtttt caggactact
     1561 ccaagcgccc cgccaggacg ccgcaacaat gccttcgttc gcgcgatgag ctccgtcatc
     1621 gcaaacggct tgaccagata gtcatcggcg ccggtgtcaa gaccgcgaac gcgatcatcg
     1681 acagcatcgc gagccgtcag gacaagcacg ggggtgaggt tacctcccgc tcgcaactct
     1741 ccgagcaagc tcaacccgtc accgtcgggc aaaccgagat caacaattgc cgcatcatag
     1801 gatgtgaccg tgagcgctgc cagcgcttcg gagcgtagcg ctacggtatc aacagtgaaa
     1861 ccgatgcgcg tcagcgctcc ctgaacgagc tcagcaatcc gcgtctcatc ctctacgacc
     1921 agtagacgca ttgtagcctc gacgatcagt actcgttgtc gctaacagtt tgccaaagag
     1981 tgtaccgcag ccgcgacgtc aatcgttcag tagctgccgg gtacaacaaa taaatatcac
     2041 ctcttttctg ctgttcgaaa tgtatttcag ccgatacaca tcatgaaatg gtgatctact
     2101 ttccacagta ttgccgcaag cacataaaac tgtcttaaac gagcccctat agaatggtcg
     2161 attgcgcggt gggccgcctc gtttgtttgc tcgcagcagg cggtcccttc atcatggccg
     2221 aatttccgcg agtggatgaa gccttggggg cgtctgaacg gcagaaaaat caggcccggc
     2281 aatcgctata ccgcgtcatg aattcgcggc gggcggtaga gaccgcctat gcttccggca
     2341 actcggcgga ggcgcgtact cgcttccagc aggcgcgctc cagctggaac aacatttctc
     2401 ccgtgatctc cgcacgtgaa gcccgtgaag ctcaactctc ctttccaatc cctagacagt
     2461 cagttgaaga gcggcgatcc ggcgacctag gtccgatcga cggcatcggc atgcttgagg
     2521 aattgcgcga ggatcacgac ctgaatccga acgcgccgcg agcggtgcta gttgccgacg
     2581 atccgccgct cattctcgcc gacaaaccga ccatcaatct cgacgatgac aatccccgca
     2641 acgtgatgtt cctgttgtgc aattcttgca gcgaacgggg caagacattg atcgtggcgg
     2701 cccatgacaa ttatgcaatg cacgcacccg acgcgacctc cgagatgctc cttgccctgc
     2761 agcgagtagc aaatgtcgca tgcgaaatcc cgagcacaga gcttctccca caatctcgcc
     2821 cccgaacaca taaaactacc ttaaacaaag ccatgtaccg tcccgccttg ctcgcgacga
     2881 cgtgtgcttt gaccttgacg acttgcaggc aatttacgct attgggtcca cggggaagcg
     2941 atctccccac gaggcgacag ccgaagcatc acgtccaaca gtttcagcct gcactcgtgg
     3001 cgggtgcaag gacgcatgat gtcgtcaaga gagactctct tctgcgaaaa tcgtccgcat
     3061 cggaatggtg cccgaaagcg tcacgtgctc tcggccgtct cttggcatcg ctgcaggcgg
     3121 cacgtccagc aaattttttc tttcgccaaa tcgaaccaac aggcccgccc cgcggcttga
     3181 accgcaacgt cgataaatag gcagctaagc ataccaggga gaccaaaatg agtggaaatt
     3241 ggaaattggc catagcgatc gggctcgtca cacttgccgg gaccttcgcg gctcaagcgg
     3301 ccgaaagcgc tgacgaagcg ct
//
LOCUS       DATILV010000903         2821 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_995254, whole genome shotgun sequence.
ACCESSION   DATILV010000903 DATILV010000000
VERSION     DATILV010000903.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2821
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_995254"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..582)
                     /locus_tag="VLJ17_21720"
     CDS             complement(<1..582)
                     /locus_tag="VLJ17_21720"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV25632.1"
                     /translation="MAFTIDIHHHILPNFFWEATNEQSGPVGGIAPARWSTDAAISFM
                     DDAGIDVAITSISTPGVHLGDDAAAGALARRCNEFSAELIQKYPSRFGGFACLPLPDV
                     EGSLQEVAYALDVLKLDGVVLFSNARGVYLGDRRFAPLFQELQRRAAVVFVHPTTSPD
                     TAFHQLGLPDSLLDFPVDTSRAIANLHYSNTFAR"
     gene            complement(595..2184)
                     /locus_tag="VLJ17_21725"
     CDS             complement(595..2184)
                     /locus_tag="VLJ17_21725"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HSV25633.1"
                     /translation="MSNSNAETQGINQAQLKGTYDYIVVGAGASGCVIAGELSKTGAE
                     VLVVESGGEDAGPTISNPSIWFYNVGGALDWKLPIAPVPQLHNRKFDMALGHVLGGGS
                     SINAMVWSRGMERDYDSWEQNGAKGWGFKDVLPVFKAQEDWEGGANEWRGVGGPVHIR
                     KPGDPHPTAPAFLEAARQMGFPILDDVNGPMRSGAGYINMNIAADGSRVSAARAFLRP
                     NLARPNLTLLLNANVTRVVFDGDRANGVEIVLGEGTRTARARHEVILAAGTIHTPKLL
                     MLSGVGDAAQLRKLGIKPVANLRGVGQNLQDHVLLSGVVYQYKGKMPDRPADSNAVEA
                     EVYLSSGVDSHQTDITLVLEQLPIATPEAASRFGSPPKEGFTIAPALVQPSSRGRVRL
                     ASADWRDAPIIEGNHLGTDRDLAAMLRAIEAARELGRQSAFDSIREVEVVPGIKATTQ
                     LDVIDLARTASASFGHAVGTAKIGVDADAVVDNKLQVHGLRGLRVADASVMPSIISGP
                     GTHAPSIMIGGRAATLIKTAN"
BASE COUNT          557 a          848 c          882 g          534 t
ORIGIN      
        1 ccgcgcgaag gtgttgctgt aatgaaggtt cgcaatggcg cgagaggtgt cgacggggaa
       61 atcaagcagg gaatcgggta atcccagttg atgaaatgcg gtgtccggcg aggtcgttgg
      121 atgaacgaag acaaccgccg cgcgtcgctg cagctcctgg aagagaggcg caaaccgtcg
      181 gtccccaaga tagacgccgc gcgcattaga gaagagcaca acgccgtcga gtttgagtac
      241 atccagggcg tatgcaacct cctgcagact tccctcgaca tcgggcaacg gtaggcaggc
      301 aaagccgccg aagcgcgacg gatatttctg tatcaactcg gcggagaact cattgcagcg
      361 gcgtgccagg gcaccggccg cggcatcgtc gcctaagtga acaccgggtg tgctgataga
      421 ggtgatggcc acgtcaatcc ccgcatcgtc catgaaactg atcgcggcgt cggttgacca
      481 gcgagcgggt gcaatcccgc cgaccggacc ggattgttca ttggtcgctt cccagaagaa
      541 gttcggcaga atgtgatggt gaatgtcgat ggtgaatgcc atgggtgtcc gcgctcaatt
      601 ggccgtcttg atcagcgtgg cggcacggcc gccaatcatg attgacggtg cgtgcgtgcc
      661 cggccctgaa atgatcgacg gcatgactga ggcgtccgcc acgcgcaggc cccgaagccc
      721 gtggacctga agcttgttgt ccacgaccgc gtccgcgtcc acaccgattt tggcggtgcc
      781 gaccgcgtgt ccaaagctcg ccgatgcggt gcgtgcaagg tcgatcacat ctagctgggt
      841 agtggcttta atgccgggaa ccacctcaac ctcacggatg ctgtcgaagg cggactgtcg
      901 accaagctcg cgggctgcct cgatagcccg gagcatggcg gcgagatccc ggtccgtgcc
      961 cagatggttg ccttcgatga tgggcgcatc acgccaatct gcgctcgcca accgcacgcg
     1021 gcctcggctc gacggttgga cgagcgcggg cgcgatggtg aatccctctt tgggcggcga
     1081 gccgaagcgg gacgcggctt ccggcgtcgc gatcgggagc tgctccagga ccagagtgat
     1141 gtcagtctga tgactgtcga caccgcttga caggtagact tcggcctcga ccgcgttact
     1201 gtccgccggg cgatcgggca tcttcccctt gtattggtag acgaccccgg acagcagcac
     1261 atgatcctga aggttctggc caacgccccg cagattggca acaggcttga tgccgagctt
     1321 ccgcaattgc gctgcatcac ctacaccgga gagcatgaga agcttcgggg tgtggatagt
     1381 gccggctgcg aggatcacct cgtggcgtgc ccgggcagtt ctcgtcccct cgcccagcac
     1441 gatttccacg ccgttggcac gatcgccgtc gaagacgact ctggtgacat tggcgttgag
     1501 taaaagtgtg aggttggggc gagcgaggtt cggccgcagg aaggcgcgcg cggcgctcac
     1561 gcgcgagcca tccgccgcga tattcatgtt gatgtagccg gctccggacc tcatcggccc
     1621 gttgacatcg tcaaggatgg gaaatcccat ctggcgcgcc gcctctaaaa aggcaggggc
     1681 agtgggatgg ggatcgccag gcttgcgaat gtgcacagga ccgccgacac cgcgccactc
     1741 attggcgccg ccttcccagt cctcttgggc tttgaatacc ggcaagacgt ccttaaaccc
     1801 ccaacccttg gctccgtttt gctcccagct gtcgtaatcg cgctccatgc cacgcgacca
     1861 caccattgcg ttgatggagc tgccgccgcc caagacatgc ccaagggcca tgtcgaactt
     1921 gcgattgtgc agctgtggca ccggggcgat cggcagcttc cagtccaatg caccgccgac
     1981 gttgtaaaac cagatgctgg gattgctgat ggtcggaccc gcgtcctcac cgcccgactc
     2041 gaccaccagc acttcggcac cggtcttgga gagctcgcct gcgatgacgc agccggaagc
     2101 tccggcgccg acgacgatat agtcgtaggt acccttgagc tgcgcctggt tgatgccttg
     2161 cgtttcagca ttggaattgc tcatctttgg gcctcgttag aggagaaact cgcgtttgcc
     2221 actgcgcgag ttgatccaga tgacgtccga gagggcggtg aggctttccc ggccggttcg
     2281 accccagcag ctgtcccgtg cgaacagaga taaagagcga ggtagccttc cctgtccgcg
     2341 cgaaacgtct gtgaaggaac caaacgtcgc gacctcgcgc tgctcatcca agacccggaa
     2401 acaacattca ggtgagttcg aattcgaaac ctcgggaata atccatcggc gtacgttggt
     2461 aagccagacc acaattacga cttcccatca cgaatcacgc atgatccgct gaagcccagt
     2521 tgtttggttt tgggtgcgcg gggatactgt ggatatccgc gaaaccgggc gtactaggag
     2581 acgctggcgg gcggatcgta ccgatctcca ctcacgagat ggcgttgggt atgccacggc
     2641 ccttccggtc cgtgagacta ccgaccgtag tccgagtgtt cctagaggtc ggaacgcggg
     2701 tcaaaccgca gcaaatcgac gctgcgagcc ttgcacgtca ggcgctcaca caacagctga
     2761 aactgccgct ttattcgact gccagactta ggggcccgca gacgggcgat ctggcatggc
     2821 c
//
LOCUS       DATILV010000904         2070 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4065642, whole genome shotgun sequence.
ACCESSION   DATILV010000904 DATILV010000000
VERSION     DATILV010000904.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2070
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4065642"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..503)
                     /locus_tag="VLJ17_21730"
     CDS             complement(<1..503)
                     /locus_tag="VLJ17_21730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25634.1"
                     /translation="MNARVLTAAVAAFGLLVFASASTAQTSDPGCENPVLVSTGGAFS
                     RDPNTLAVRWTGFSNYELAYKGDVLLLDAYFDRGSIFPPLGFKAADIKRANVILLGHG
                     HFDHMSDAASVGIRTGALVVGAPVTTEKLLTQSINPKQVRTVTGKGGELLKFAHYTIE
                     PILGRHG"
     gene            643..1743
                     /locus_tag="VLJ17_21735"
     CDS             643..1743
                     /locus_tag="VLJ17_21735"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSV25635.1"
                     /translation="MRALLAILSALLLCTASAAAQQRTTLDIYVTDVEGGNATLFVTP
                     AGESVLIDTGNLNGAVRDVGRIMDAVRDAGLTQIDHLILTHYHADHFGGMEELSKRIP
                     IREFIDHGPNVQPGAGADWERDVYPKLYGKAKHTIAKAGDHIALKSVDWRIVSSAGEM
                     ISPTALPGANKPNPECAKFQPFDNNMEDPMSVASYITFGRFHTAHLGDLTRNMEFKLM
                     CPNTRLPPVQLFLGLHHGVESSNAEVMVHGLRPRVAIINNGTRKGGDPHTMTSVHTSP
                     GLEDLWQIHFSQLSGQEYTQPGMFIANRLDDDSPTMPIAPIATPGPDAPPAPIHNGKA
                     YWIKVSAKPDGSFTVTNQRNGFSKTYGAAPGS"
BASE COUNT          410 a          635 c          628 g          397 t
ORIGIN      
        1 tcgccgtgcc ggccgagaat cggctcgatc gtgtagtgcg cgaacttcag cagctcgccg
       61 cccttgccgg tcaccgtccg cacctgtttc gggttgattg actgcgtcag cagcttctcc
      121 gttgtgacgg gcgcgccgac gacgagggcg ccggtacgga tgccgaccga agcggcgtcc
      181 gacatgtgat cgaagtggcc gtggccaaga aggatcacgt tcgcgcgctt gatgtcggcc
      241 gccttgaacc cgagcggagg gaagatgctg ccgcgatcga agtaagcatc gagcagcaga
      301 acgtcacctt tgtaggcgag ctcgtagttc gagaagccgg tccatcgaac cgcgagcgtg
      361 ttcggatcgc gcgagaacgc gccgccggtc gagaccagca ccgggttctc gcagccgggg
      421 tcgctggtct gcgccgtgga cgccgaggca aacacgagta agccgaaggc cgctaccgct
      481 gccgtcaata cgcgcgcgtt cattctgccc tccctgccgt ggttgatctg ctgcgacgaa
      541 agaatacgcc cgcggctgcc ggctgtcgat ctttggcgtt ggacgagttc ggttgatgcc
      601 cgaaaatgat gtaggatggt tcgcgaacat ggggaggatt ccatgcgggc attgttggcg
      661 attttatcgg ctcttctgct gtgcacggcg tctgccgccg cgcagcagag gaccacactc
      721 gacatctatg tgaccgacgt cgaaggcggc aacgccacgc tattcgtaac gccggccggc
      781 gagtcggttc tgatcgacac cggcaacctc aacggggcgg tgcgcgacgt tggccgcatc
      841 atggacgcgg tgcgcgacgc gggtttgacc cagatcgatc atctgatttt gacgcattac
      901 cacgccgacc atttcggcgg catggaagag ctgtcgaagc gaatacccat cagggaattc
      961 atcgatcacg ggccgaatgt gcagccgggc gccggcgcgg attgggaacg ggatgtctat
     1021 cccaagctct atgggaaggc caagcacacc atcgccaagg ccggcgacca catcgcgctc
     1081 aagagcgtcg actggcgcat tgtttcttcg gccggagaga tgatctcgcc gaccgcgctg
     1141 ccgggcgcca ataagccaaa tccggaatgc gccaaattcc aacccttcga caacaacatg
     1201 gaagacccca tgtcggtggc gagctacatc accttcggcc gcttccacac cgcgcatctg
     1261 ggcgatttga cgcgcaacat ggaattcaag ctgatgtgcc cgaacacgcg gctgccgcct
     1321 gtgcagctgt tcctgggcct gcaccacggc gtagaaagct ccaatgcgga ggtgatggtg
     1381 cacggcttgc gcccgcgcgt cgcgatcatc aacaacggca cgcgcaaagg cggcgacccc
     1441 cacaccatga cgagcgtgca tacctcgccc ggtttggagg acctttggca gattcatttc
     1501 tcgcagctca gcggacagga atacacgcag cccggcatgt tcatcgccaa ccggctggat
     1561 gacgattccc cgaccatgcc gattgcgcca atcgcaacgc cggggcccga tgcgcctccc
     1621 gcgcccattc acaacggcaa ggcctattgg atcaaagtgt cggccaagcc ggacggctcg
     1681 ttcaccgtta ccaatcagcg caacggcttt tccaaaacct acggcgctgc gccgggaagc
     1741 tagacgcgca acatcacgcc ttctggcttt gaaactgtca tgatctcagg gggcaggtga
     1801 gcctgtgcct tggtgcctct ttcctggcga gttggcgggt acaaaagaga agatgtagtt
     1861 cttagaagcg ctgctggttg ttacttggcc gtaatacccg caaccttcac ttggcggacg
     1921 ggtcagttca gactttcata agtccggtat gccgacaata cgttcaggtg gatcggccga
     1981 catcgcaatc ccgcggagaa atctcattgc atcgctcttt tcaattcttg agcgttccgc
     2041 agtgcttcac gcggtgcgag catttcgcca
//
LOCUS       DATILV010000905         1711 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_222417, whole genome shotgun sequence.
ACCESSION   DATILV010000905 DATILV010000000
VERSION     DATILV010000905.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1711
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_222417"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..842
                     /locus_tag="VLJ17_21740"
     CDS             <1..842
                     /locus_tag="VLJ17_21740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25636.1"
                     /translation="DAAALKKMGTGNNVPGATFTLDGNAARPPSASDHFPDKQSNLVP
                     IYLSMGAYNGLQQSDVHSYWEFNYQGTNWVHPLYELPSTGGFPDNFGEAPDAFEDGEI
                     GALLSIIPGPGPAGKQNNPTIVGDNPSLPRDPDKFDADPGFDNQREFRERGVPSGLAN
                     EIFLDVYVRPASFMPHEKNLERRLFEAYEDEVERVDPNDHGIVTAAVGDIDTATDGFP
                     NNERLYLPPTVFNRFAVTREINDGLLAPRFSPSQRAWVLTGTRVPVSPAVSASAGRDG
                     DDR"
     gene            complement(994..1458)
                     /locus_tag="VLJ17_21745"
     CDS             complement(994..1458)
                     /locus_tag="VLJ17_21745"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSV25637.1"
                     /translation="MKFAGFGHVTLTVSNYDQCLAFYDRLMTHIGMRRYYESPFAVGW
                     YVDEYMFVIGHAAPAGDRFSQWRSGLHHLSFRARSREEVDACYAMLKEIGAKIIFPAE
                     PGPFWPGYYSLVCEDPDGIRIEMNYIPQEGWKAVGAAADAIARGEAAPAKTW"
     gene            complement(1485..>1711)
                     /locus_tag="VLJ17_21750"
     CDS             complement(1485..>1711)
                     /locus_tag="VLJ17_21750"
                     /inference="COORDINATES: protein motif:HMM:NF039984.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF6081 family protein"
                     /protein_id="HSV25638.1"
                     /translation="FEIVYDSAHDQVTFSADGKQLRQYSNVPFKLGPCTLALGLMSEK
                     DIAPDKGSVSCHGQGAVGKWGNIKIATTSP"
BASE COUNT          357 a          524 c          471 g          359 t
ORIGIN      
        1 ccgatgctgc tgcgttgaag aagatgggca ccggtaacaa cgttccgggc gcgacgttta
       61 ccctcgacgg aaatgctgcc cgtccgccca gcgcgagtga tcattttccc gataagcaaa
      121 gcaaccttgt acccatctac ctcagcatgg gcgcttacaa cggtctgcag cagagcgacg
      181 ttcactccta ctgggagttc aactaccagg gaaccaactg ggtccatcct ttgtacgagt
      241 tgccatctac cggaggtttt ccggataact tcggcgaggc gcccgatgct ttcgaggatg
      301 gcgagattgg agccctgcta tcgatcattc cggggccggg gcctgcaggt aagcagaaca
      361 atcccaccat cgtcggcgac aacccgagcc tgccccgcga tccggacaag ttcgacgcgg
      421 accctggctt tgacaaccag cgtgaattca gggagcgcgg agtaccaagc ggattggcca
      481 acgagatctt ccttgatgtg tatgtgcggc ccgcctcatt catgccgcat gagaagaacc
      541 tcgagcgcag actgttcgaa gcctatgagg acgaagtcga acgcgtcgat cccaatgacc
      601 acggcatcgt aacagccgca gtaggagaca tcgacacagc tactgacggc ttccccaaca
      661 acgaacggct gtaccttcct ccaaccgtgt tcaaccgctt cgctgtaacc agggagatca
      721 acgacggcct gctagctcca cgtttttcgc cgagccagcg cgcatgggtg cttaccggga
      781 cacgggtgcc ggtgagtccc gcggtatcgg cctcagcagg tcgtgatggt gacgataggt
      841 gataggttcc agtcgcttgg cttagctagg tacttcgatg gtcgtggctg ggatttgcta
      901 tcccggccac gacctattcg gcagctaaca tagatctgtt tgcctgacct atcgtataac
      961 ttccgccact taggaggcgc tcgcagcttt cacttaccag gtctttgccg gcgcagcttc
     1021 gcctcgcgcg atcgcatcag ctgcggcgcc gaccgccttc catccttctt gggggatgta
     1081 gttcatctcg attcggatcc cgtcaggatc ctcgcagacc agcgaatagt agcccggcca
     1141 aaacggaccc ggctcggcgg gaaaaataat cttcgcgccg atttctttca gcatcgcgta
     1201 gcaagcgtcg acttcctctc ggctgcgcgc gcgaaacgac aggtgatgca atccgctgcg
     1261 ccactgcgaa aatcgatcgc ccgccggcgc cgcatgcccg ataacgaaca tgtactcgtc
     1321 cacgtaccag ccgaccgcga aaggcgactc gtagtatcgg cgcatcccga tatgcgtcat
     1381 cagccgatcg taaaacgcga ggcattgatc gtaattactg accgtcagcg tgacgtgacc
     1441 gaagccggca aatttcatcg gatgtcctcc cgcccggcga taactcacgg tgacgtggtc
     1501 gcgattttta tattgcccca cttgccgacg gcgccctggc cgtggcacga cacgctgcct
     1561 ttgtccggtg cgatatcttt ttcgctcatc agtccgagtg cgagcgtgca tggcccgagc
     1621 ttgaacggca cattcgagta ttgacgcaac tgcttgccgt ccgccgaaaa ggtcacttga
     1681 tcgtgagccg aatcgtatac gatttcgaaa t
//
LOCUS       DATILV010000906         8488 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4566066, whole genome shotgun sequence.
ACCESSION   DATILV010000906 DATILV010000000
VERSION     DATILV010000906.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8488)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8488)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8488
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4566066"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..696
                     /locus_tag="VLJ17_21755"
     CDS             <1..696
                     /locus_tag="VLJ17_21755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HSV25639.1"
                     /translation="YLLNEKSDSKGAAKKFEEVDRQHPYSEWARKSLLMSAYSYYEAR
                     NYDESISAAKRYISLHPGTPDAAYAMYLVGASYFDQIPDVSRDQGRTERAIAALEEVV
                     RKFPESEYAASARRKIEGARDQLAAKEMTVGRYYESKKNFIGAINRFKVVVTRYQTTR
                     HVEEALMRLTECYMTLGIVPEAQTAAAVLGHNFPDSIWYKDAYQMVKGQGFEPQENNS
                     SWISRAFRKIGVG"
     gene            886..2400
                     /locus_tag="VLJ17_21760"
     CDS             886..2400
                     /locus_tag="VLJ17_21760"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MDR family MFS transporter"
                     /protein_id="HSV25640.1"
                     /translation="MPSATIAGAPPAERPRALTPAEARTIFVGLMLAVFLAALNQTIV
                     ATALPTLGRYFNDLENLSWIVTSYLLTSTAVAPLYGKLSDIHGRRSVMLASIGIFAAG
                     SAACAAASDMLSLVLGRALQGIGGGGILPVAQAIMADAIAPRERGRYQAYMAIVWVTS
                     GVGGPILGGVLSEHFHWSLIFWINLPLALAAAMMTYTRLARLPRHERRHKLDILGAGL
                     MMAAAVALLLALTWGGTRYPWLSPPIVALVAGSGLLSLAFCWRLTRAPEPFLPLSVMS
                     EPIMYMGTASNSFAMGASIGLVIFVPLYYELVHHLSASDSGLALVPLALTTPGSILSG
                     RAMLHMRRYKWVPLVGLTVGIAGLGLLIWQPALSLWAVIVIMSLVGIAIGTVFPVCTV
                     SIQNAVPNHQVGVAMGAMNFFRALASAFAVAGMGAILLAGVGVTVGRGGSAAAVVANV
                     RGVGFDFAAVFRWVFVAAEAFLVASLVTLILMEERPLRGPEQSAAAKPVAPAGS"
     gene            2590..3420
                     /locus_tag="VLJ17_21765"
     CDS             2590..3420
                     /locus_tag="VLJ17_21765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020607779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSV25641.1"
                     /translation="MAERMRAPLGQPVIVENVTGAAGSIGVGRVARAAPDGHTLVAGF
                     WGTHVVNGATQALAYDVLNDFEPILQMSSNVQVIVGRKTLPLSDLKGLIAWLKANPDT
                     AAAGTAGGGSPQHVDGAFFQKATDTRFRFVPYRGGAPAMQDLVAGQIDLIFADQTTSL
                     PQIRSGNIKAFAVTGKSRLAAAADIPTVDEAGLPGFYCAVWNALFAPKGTPRDVITRL
                     NAAAVDALAEPAVRQRLADLGQQIVPRAEQTPEALAALHKAEIAKWWPIIKAAGIRAE
                     "
     gene            complement(3424..5532)
                     /gene="flhA"
                     /locus_tag="VLJ17_21770"
     CDS             complement(3424..5532)
                     /gene="flhA"
                     /locus_tag="VLJ17_21770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011442783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HSV25642.1"
                     /translation="MAEASATPGGGLRLPGLSQISELLRRGDLALAIGVMAILVILIL
                     PLPPLLLDFALAISIILSVLILMTALFINAPLEFSTFPTVLLISTMLRLSLNLASTRL
                     ILSHGHEGPSAAGHVIEAFGNFVMAGNFIIGIIVFTILVIVNFVVITKGSGRIAEVAA
                     RFNLDAMPGKQMAIDADLSAGLIDEKDARRRRKQLEDESSFFGAMDGASKFVRGDAIA
                     GLLVVFINIVGGMIIGIAQQGISFADAASSYTVLTVGDGLVTQVPALIVSTAAGLLVS
                     KAGLGEAADKVLLRQLSGYPKAVGMSSAVMIVMSLLPGIPTLPFLLLGAGAGALAYMM
                     EKRSAAAIVETKKAEAATKAAPAEEPISAALKIDDLKIELGYSLLPLVNSPDGTDRLT
                     EQIKALRRSLAAELGCVMPAVRILDNVQLESNVYVIKIKEVEAGSGRVFPGQFMAMDP
                     AGGQVQLPGVHTIEPTFGLPATWIDAGLKEEASLKGYTVVDAATVLATHLTEILKSNV
                     ADLLSYAEVQKLLKELPKDQAELIKDIVPGQITNTGIQRVLQMLLAERVSIRDLGTIL
                     EGIADGLSFTRNYAALTEHVRTRLARQICAQHAASAGYLPLISLSPKWEQAFAESLTG
                     QGDERQLAMPPSRLSEFITLVRDRFEEAARQGEAPVLVTSPAVRPFVRSIVERFRSQT
                     SVLSQSEIHPRARLKTVGNI"
     gene            6017..7519
                     /locus_tag="VLJ17_21775"
     CDS             6017..7519
                     /locus_tag="VLJ17_21775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008137666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV25643.1"
                     /translation="MGIQMPPQTVDTAPNGSGLAKLPISQIDGTIIESDIPARLDRLP
                     WSRFHWLVVFALGITWVLDGLEVTLAGTLAGAIRGSLQLTSTEIGFASTAYVLGAVSG
                     ALFFGWLTDRLGRRRLFFVTLTVYLMAAAATAFSWNIASFALFRFLTGAGIGGEYAAI
                     NSTIQELIPARYRGWTDLAINGSFWIGAAIGAISSVVFLDEALFASETGWRIAFFVGA
                     VLALIIYFMRLWIPESPRWLMTHHRAQEGATIVDLIEENIRNRGQALPPVTAPPSRLR
                     GRRHTPLREVLITLFCFYPRRTFVGFSLMAAQAFFYNAIFFTYALVLTDFYHVPSDRV
                     GWYILPFAAGNFCGPLLLGRAFDTVGRIPMITLTYVASGLLLAASGALFAREAITAEW
                     QTVAWMLIFFFASAAASSAYLTVSETFPLEIRALTIAVFFAIGTGIGGALGPWLFGAL
                     IQTGSRASVFMGYLLGSALMIAAGIIQWRWGTAAERKSLETVARPLTFTD"
     gene            8305..8427
                     /locus_tag="VLJ17_21780"
     CDS             8305..8427
                     /locus_tag="VLJ17_21780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25644.1"
                     /translation="MTTLAVVIGGKLATGIDDHERGLHAGKARTNKDSEMIHGH"
BASE COUNT         1539 a         2586 c         2590 g         1773 t
ORIGIN      
        1 taccttctca acgaaaagag cgattccaaa ggcgcggcaa agaaattcga ggaagtcgac
       61 cgtcaacatc cctattcgga atgggcgcgc aagtcgctgc tgatgtcggc ctactcgtat
      121 tatgaggccc gcaactacga cgaatcgatt tcagccgcga agcgctacat ttcactgcat
      181 cccggcacgc cagacgccgc ttacgcgatg tatctcgtcg gtgcctccta tttcgaccag
      241 attcccgatg ttagccgcga ccaggggcgc accgagcgag cgattgccgc gctcgaagag
      301 gtggtgcgaa aattccccga gtccgaatat gcagcgagcg cgcggcgcaa gatcgaaggc
      361 gcgcgcgacc aactcgccgc caaggaaatg accgtcggcc gttattacga gtccaagaag
      421 aattttatcg gcgccatcaa ccggttcaag gtcgtggtga cgcgctacca gaccacgcgc
      481 catgtcgagg aagccctgat gcgtctcacc gagtgttaca tgacgctcgg catcgttcca
      541 gaagcccaga ccgccgccgc ggtgctcggg cataatttcc ccgacagcat ttggtacaag
      601 gatgcttacc agatggtgaa aggccagggt tttgagccgc aagagaacaa cagctcgtgg
      661 atcagccgag catttcgtaa gatcggagtg gggtgagcgc cagctgcgcg ggcgcttgta
      721 gggggcttgc gcacgggtgc ccatgacgat aggtttcgct ccccgctcaa tccatcctgc
      781 gcttcattta gttcgacgac tcgcttgcgg catcgcaatc ggttagcttt gcgcgtgaag
      841 ctgacgcagc ccaaatccaa gcctccttct ccggtgcgca acaaaatgcc cagcgcaacg
      901 attgctggcg caccgccggc ggaaaggccg cgcgcgctga cccctgccga ggcgcgcacc
      961 attttcgtcg gcctcatgct ggcggttttt ttggcggccc ttaaccagac gatcgtcgcc
     1021 accgcactgc cgacattggg gcgctatttc aatgacctcg agaacctgtc gtggatcgtc
     1081 acctcgtatc ttctgacttc aacggctgtt gcgccccttt acggtaagtt gagcgacatc
     1141 catgggcggc gcagcgtcat gctcgccagc atcggaattt ttgcagccgg atcggcagcg
     1201 tgcgcggcag cgtccgacat gctgtcgctc gttttgggcc gcgccctgca ggggattggc
     1261 ggcggcggca tcctgccggt ggcgcaagcg atcatggccg acgccattgc gccgcgcgag
     1321 cgcggacgct accaggccta tatggcaatc gtctgggtca cctcaggggt cggcggtccg
     1381 atcttgggcg gggtgctctc cgagcatttt cattggtccc tgatcttctg gatcaacctg
     1441 ccgttggcgc ttgccgccgc catgatgacc tatacgcgcc ttgcacggtt gccgcgtcac
     1501 gagcgccggc acaagctcga tatccttgga gccggcctca tgatggcggc cgcggttgcc
     1561 ctgcttctgg cgctaacctg gggaggtaca cgatatccat ggctgtcgcc gcccatcgtt
     1621 gcgctcgtag caggctcggg cctcttgtcg ctggcattct gctggcgatt gacccgcgca
     1681 cccgaaccgt tcttaccgct ttcggttatg tccgagccga tcatgtatat gggtactgcg
     1741 tccaattcat tcgccatggg cgcgtcgatt ggattggtaa tcttcgtgcc gctctattac
     1801 gagctcgttc accatctttc cgccagtgac tccgggttgg cgctcgttcc gctcgcgctc
     1861 acaacgcccg gatcgatcct ctccggccgc gccatgttgc acatgcgcag atataaatgg
     1921 gtcccgttgg tgggcctgac ggtcggtata gcgggtcttg gacttctgat ctggcagccg
     1981 gcgctttcgc tctgggcggt gatcgtcatc atgagcctcg tcggcattgc gatcggcaca
     2041 gtgtttccgg tgtgcaccgt ttcaatccag aacgccgtgc ccaaccatca agtcggcgtg
     2101 gcaatggggg cgatgaattt cttccgcgcc ctcgcgagcg cctttgcggt cgccggcatg
     2161 ggggcgattc tgcttgcagg agtcggggtt acggtcgggc gaggaggtag cgccgccgcc
     2221 gtggtggcaa acgtgagggg ggtcggattt gacttcgcgg ccgtgttccg ttgggtcttc
     2281 gtggcggccg aagcatttct ggtcgcatcg ctggtgacgt tgatcttgat ggaggagcgt
     2341 ccgctgcgcg ggccggagca gagcgcggcg gcaaaaccgg tagctccggc aggctcatga
     2401 tcgcagaggc ggcccgtgtt tcaatttgcg ttgatgacca agcaaagacc catcgtcgac
     2461 gccatcttcg cggcaacgct ggccattgtg gggccaaatt ccgcaaaggc gcaaaccttt
     2521 ccgtcgcgac caatcaccat cgtggtgccg tttgcggcag gcgggccgat agacaccttg
     2581 gcgcgggtca tggccgagcg gatgcgggcg ccgctcggcc agccggttat cgttgaaaac
     2641 gtgaccggcg cggccggcag catcggcgtt ggccgggtcg cccgcgcggc tcccgatggc
     2701 cacaccctcg ttgccggctt ctggggcacg catgtggtca acggcgccac ccaggcgctt
     2761 gcctacgacg tcttgaatga tttcgaacct atcctccaaa tgtcgagcaa tgtgcaggtc
     2821 atcgtcggca ggaaaaccct gcctttgagt gatctcaagg gcctcatcgc ctggctgaag
     2881 gccaaccctg acaccgccgc ggccgggacc gccggcggcg gcagcccgca gcatgtggat
     2941 ggtgccttct ttcagaaggc caccgacacg cgtttcaggt tcgtgcccta ccgcggcggc
     3001 gcgccggcga tgcaggatct ggtggccgga cagatcgact tgatattcgc cgaccagacg
     3061 acgtcgctac cacagattcg tagcggcaac atcaaggcct ttgcggtgac cggcaagagc
     3121 cgtttggcgg cggccgcgga tattccgacg gtggacgagg ccggattgcc cgggttctat
     3181 tgcgccgtct ggaacgctct ttttgctccc aagggcacgc cccgcgatgt catcaccagg
     3241 ctcaacgcgg ctgctgtgga cgcattggcg gaaccggcgg tccgccagcg ccttgccgac
     3301 ctgggccagc agatcgtgcc acgcgccgag cagaccccgg aggcgctcgc ggcgctgcat
     3361 aaggcagaga tcgcgaagtg gtggcctatc atcaaggcgg cgggtattag ggcggaataa
     3421 atttcaaata ttccctaccg tcttaagccg tgcgcgcgga tggatctccg actgcgacag
     3481 cacgctggtc tgggaacgga agcgctcgac aatcgagcgt acgaacgggc ggactgcggg
     3541 tgacgtcacc agcaccggcg cttcgccctg gcgtgccgcc tcctcgaagc ggtcgcgcac
     3601 cagggtaatg aattccgaca accgcgacgg cggcatagcg agctggcgct cgtcgccctg
     3661 gccggtgagc gattcggcga acgcctgctc ccatttaggt gatagcgaaa tcaacggcag
     3721 gtatccggcc gatgccgcgt gctgggcaca aatctggcgg gcgaggcgcg tgcgcacgtg
     3781 ctcggtcagc gccgcatagt tgcgggtgaa gcttaggccg tcggcgatgc cttccaggat
     3841 ggtgccgagg tcgcggatcg aaactcgctc ggcgagcagc atttgcaaca cccgctgaat
     3901 ccccgtgttg gtgatctggc ccggcacaat gtccttgata agttcggcct ggtccttggg
     3961 cagttcctta agaagcttct gcacttccgc gtaggagagc agatccgcca cattggactt
     4021 gaggatctcg gtgaggtgtg tggcgagcac ggtcgcagcg tcgacgaccg tgtagccctt
     4081 gagggatgcc tcttccttga ggccggcatc gatccaggtt gccggcagcc caaacgtcgg
     4141 ttcgatggta tgcacgcccg gtagctgcac ctgtccgccc gccgggtcca tcgccataaa
     4201 ctgcccggga aaaaccctgc cggagccggc ttcgacctct ttgatcttga tcacatagac
     4261 gttggattcg agctggacgt tgtcgaggat gcggaccgcc ggcatcacgc agccgagctc
     4321 ggcggcgagc gagcggcgta gcgccttaat ctgctcggtg agacggtcgg tgccgtcagg
     4381 cgaattgaca agtggcagca gcgagtatcc cagctcgatc ttgagatcgt cgatcttgag
     4441 cgcggccgaa atcggttcct cggcaggagc tgccttggtc gcggcctcgg ccttcttggt
     4501 ttccacaata gcggcggcac tcctcttctc catcatatag gcgagcgcgc cggcgccggc
     4561 gccgagcagg aggaacggca gcgtcggaat gccgggcaag agcgacatca cgatcatcac
     4621 ggccgacgac atgccgaccg ccttgggata tcccgacaat tgtcggagca gcaccttgtc
     4681 ggccgcttct ccgagcccgg ccttggagac cagtagccca gccgcggtcg aaacgatcaa
     4741 cgccggcacc tgggtcacga ggccatcgcc tacggttagc accgtatagc ttgaggccgc
     4801 gtccgcaaag ctgatgccct gctgggcgat gccgatgatc atgccgccga cgatgttgat
     4861 gaacaccacc agcaagcccg cgatggcgtc gccgcgcacg aatttggagg cgccgtccat
     4921 ggcgccaaag aacgagcttt cgtcctcgag ctgcttgcgc cgcctgcgcg cgtccttttc
     4981 gtcgatcagc cctgccgaga gatcggcgtc gatcgccatc tgcttgcccg gcatggcgtc
     5041 gaggttaaag cgcgccgcaa cctcggcaat gcgccccgaa cccttggtga tcaccacgaa
     5101 atttacgatc accaggatcg tgaacacgat gatcccgatg atgaaattgc ccgccatcac
     5161 gaaattaccg aacgcttcga tcacatgacc ggcggcgctc gggccttcgt ggccatggga
     5221 gaggatgagg cgggtcgacg cgagattgag tgacaaccgc agcatcgtcg aaatcagcaa
     5281 tacggtcgga aatgttgaga attcgagcgg cgcattgatg aaaagcgccg tcatcagaat
     5341 gagcaccgac aggatgattg aaatcgcgag agcgaaatcg agcagaagcg gcggcagggg
     5401 caggatgagg ataacgagaa tggccatcac cccgatggcc agggcgaggt cgccgcgccg
     5461 cagcagttcg ctgatctggc taaggccggg cagccgcaat ccgccaccgg gtgttgcgct
     5521 tgcctcagcc atgccttgcg ttcccccgaa gcctgccgcg acttggtcgg caaaatctgc
     5581 ctggttatgg tttatggcgg gttaacagtc ggcccaggtt ttcagtgcaa ccggcgttgg
     5641 cgcgagggcc gcgatgaggg ctttgggggg ccgtaaccgc aggcgccgca tcggcgccgg
     5701 ccgtgcgtgc acgcgcccgc tcgctagaca ggtgtccctc cgccacagga cgggacctgc
     5761 gcacagggcg catagctcag ttggtagagc agctgactct tatcaaaaat ttttcttttg
     5821 cgctgttcgc catagcggcc gagacacccc acagcacccc tttgggggta cccccagcgg
     5881 tgccccgaga cgatggcccg aacagcgctc acagctctcg cttcgaccca aggcctaaag
     5941 atttctctgg aattatgatt cgctggcgga actcagccac tggcagatcc cgttatactg
     6001 cgtccacctg aatgagatgg ggatccaaat gccgccgcag accgtcgaca ccgcgcccaa
     6061 tggttcaggc cttgcgaagc tgccgatttc gcagatcgat ggcacgatta tcgaatctga
     6121 tattccggct cgcttggatc ggctcccatg gagcaggttc cattggctcg tcgtctttgc
     6181 gttgggaatc acctgggttc tcgatggcct ggaggttacc ctggccggga cgttggccgg
     6241 cgccatcagg ggcagtctgc aactcaccag tacggaaatc ggctttgcaa gcaccgccta
     6301 tgtgctcggc gccgtctcag gcgcgctatt ctttggttgg ctaaccgatc ggctgggacg
     6361 gagaaggctc ttcttcgtta cgttgaccgt ctacttgatg gccgctgcgg ccaccgcgtt
     6421 ctcctggaac atagccagct ttgcgctgtt ccggttcctc accggtgcgg ggattggcgg
     6481 cgagtacgcc gccatcaact caacgatcca ggaactcatt cctgcgcgct atcgcggctg
     6541 gaccgatctc gcgatcaacg gcagcttctg gatcggcgcc gcaatcgggg caatcagctc
     6601 ggtagttttt cttgatgaag cactctttgc cagcgaaaca ggttggcgca tcgcgttctt
     6661 tgtgggggcg gtgcttgctc ttatcatcta tttcatgcgc ctatggatcc ccgagagccc
     6721 tcgctggtta atgacgcacc atcgtgcgca ggaaggggca acaatcgtcg atcttatcga
     6781 agaaaacatt cgcaatcgcg ggcaggcgct ccccccggtg accgcgccgc cgtcgcgctt
     6841 gcgcgggcga cgccacacgc ctctacgtga ggtcctaata acgcttttct gtttctaccc
     6901 gcgccggacg ttcgtcggct tttcgctgat ggcagctcaa gcctttttct acaacgcaat
     6961 tttcttcacc tatgcgctcg ttttgacgga cttctatcat gttccctcag atcgggtcgg
     7021 ttggtatata cttccgtttg cggctggcaa cttttgtgga cccttattac tggggcgggc
     7081 attcgacaca gttggccgta ttccaatgat tacgcttacc tatgtggctt ccgggctgct
     7141 acttgccgcg agcggcgccc tgtttgcgcg ggaagcgatc acggccgaat ggcagactgt
     7201 tgcctggatg ttgatcttct tctttgcttc ggcggcggcg agttcggcgt acctaaccgt
     7261 aagcgaaacg ttcccgctgg agattcgcgc gctgacgatt gcggtgtttt ttgcgattgg
     7321 cactggtatt ggcggcgctt tgggcccctg gctgttcgga gcgctgatcc agacaggatc
     7381 gcgggcgagc gttttcatgg gttatctgct cggatcggcc cttatgattg ccgctggaat
     7441 catccaatgg cgctggggga ccgccgcgga gcgcaagagc ctcgagacgg tggcgcggcc
     7501 actcactttt acggactaaa agccatggtt tcagatggcg ccacgaagga tcggctgtcg
     7561 tgacagctta gtcatgcttt ccgaaccgcg agccaccctg tgacgagcac agactttccg
     7621 cgaagagttc gagcgtcatc ggcattgatg agttgggcta gcttccgccc ccccgccgag
     7681 tgctagcgtt catgccgctc gcaccgacca atgtgagatc ggggaggcgg caatgaaaag
     7741 gttgattgca gttctggggc ttatgtcgag cttggcggcc gggacggctt ggtcgcaacc
     7801 atacgccccg aacctggcta gtaactctgc gaggtgccgc cgccatctta ccatgcggct
     7861 ctcgcgatat gtgatcaccc ttttgcagcg aatgcctcct ctcaatatca gtcgctcaaa
     7921 ttatcgacga cgtacacctt acgattggca aaatgccttg gcgtcctctt ggttctccat
     7981 caatttgccg atctgtcgac aactctcgag caaggccgcc cacaactcgt ctcggcaggc
     8041 gtcggcgttt atgccctgaa taataagctg agagtttgtt ttatactcat ccaggaactc
     8101 gggaccttcg gccagtttag ttatatgtcg ctctctaagt ttgcaactca cagcagtcat
     8161 ctggtaaacc ggcccatgcg acgcatgccg ttgtgacgaa gcacccttcc gagcatcatc
     8221 ggcagccgct tcgatagcgt cttctttcca ctagctcttt gccgtgccag ttgttctgtc
     8281 atcgagcgcg actgttgccg gaccatgacc actctcgctg tcgttatagg aggaaagctt
     8341 gccaccggca tcgacgacca cgaacgcggc ctgcacgcag gcaaggcccg aacgaacaaa
     8401 gattcagaga tgatccatgg ccattgacaa attcgccctg cggtcccggc accgcttgcc
     8461 ccgtcgcttg tcggccgcta tatgctgc
//
LOCUS       DATILV010000907         2990 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2019228, whole genome shotgun sequence.
ACCESSION   DATILV010000907 DATILV010000000
VERSION     DATILV010000907.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2990)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2990)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2990
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2019228"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..513)
                     /locus_tag="VLJ17_21785"
     CDS             complement(<1..513)
                     /locus_tag="VLJ17_21785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HSV25645.1"
                     /translation="MNYVDAATAPLRKTGQIKLHGPEAFAAMREAGRLVAECLDILVA
                     EIKCGITTEHIDRLVFEFAMDNGAMPATLMYRGYTKSTCTSINHVVCHGIPNDKLLKD
                     GDIVNVDVTLILDGWHGDSSRMYAIGEIPRRAERLIDVTYDAMMRGIAVIRPGATTGD
                     IGAAIQTFVEA"
     gene            complement(683..1396)
                     /gene="sfsA"
                     /locus_tag="VLJ17_21790"
     CDS             complement(683..1396)
                     /gene="sfsA"
                     /locus_tag="VLJ17_21790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000023 - maltose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA nuclease SfsA"
                     /protein_id="HSV25646.1"
                     /translation="MRFLSPLIPATLLRRYKRFLADVVLPDGVETTVHVANPGAMTGL
                     AAVGTKIWLSKSANPARKLAYSWELAEVDLGSGMELVGVNTAHPNALAAAAVADGAIP
                     ELRGYSSLRREVKYGRSSRVDILLEQQGKPSCFVEVKNVHLMRTKALAEFPDAVTARG
                     AKHLEELSAMATHGQRAVLLFLIQIGSADRLALARDIDPRYGAAFDRARMLGVEAIAY
                     RCAISATEIAVASAVPVLG"
     gene            complement(1461..2441)
                     /gene="denD"
                     /locus_tag="VLJ17_21795"
     CDS             complement(1461..2441)
                     /gene="denD"
                     /locus_tag="VLJ17_21795"
                     /EC_number="1.1.1.410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012652162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-erythronate dehydrogenase"
                     /protein_id="HSV25647.1"
                     /translation="MEIIITGAAGMIGRKLMERLVKDGVLHGCAINKLTLTDVVTPPQ
                     PLGFSGPVNIVTEDLATPGVAEKLVAGRPDVIFHIAGIVSAEAELDFHKGYRSNLDGM
                     RALLEAVRHTGSGYRPKLIFTSSCAAFGGPFPDVIGDEFHLTPHTSYGTQKAICELLL
                     ADYTRRGFLDGVGLRLPAICVRPGKPNKAASGFFSSIIREPLAGQEAMLPVDEKILHT
                     HASPRAAVGFLIHAARLSPELLGPCINLTMPGVSCTVAEQIAALRRIAGDKVVARIRR
                     EPDPLVIRIVDGWPHRFDAARARALGFVAERSFDEIIRIHIEDELGGVIR"
     gene            complement(2628..>2990)
                     /locus_tag="VLJ17_21800"
     CDS             complement(2628..>2990)
                     /locus_tag="VLJ17_21800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV25648.1"
                     /translation="AYFCKTRIFPIMHAVGIRRSLVERHPWLAVSVYKAFLKAKELCM
                     KELGQIGHLATSLPWSVAEYDRVRKVMGEDFWSYGVAENRHVLETLTRYSFAQGLLAR
                     KLNVDEMFVPSTYELSKI"
BASE COUNT          593 a          896 c          932 g          569 t
ORIGIN      
        1 ggcttcgacg aaggtctgta tggcggcccc gatgtcccca gtggtggcgc cggggcgaat
       61 gacggcgatg ccccgcatca tggcgtcgta ggtaacgtcg atcaaccgct cggcccggcg
      121 cgggatttcg ccgatcgcgt acattcggct cgaatcgccg tgccagccgt ccaagatgag
      181 ggttacatca acgttgacga tatcgccgtc cttcaagagc ttatcgttcg gaatgccgtg
      241 acagaccaca tggttgattg atgtacaggt ggatttggtg tagccgcgat acatcagggt
      301 ggctggcatg gcgccattgt ccatggcgaa ttcaaacacg agccggtcga tgtgctcggt
      361 ggtgatcccg catttgatct ccgcgaccag tatatccagg cattcggcca cgagccgccc
      421 agcctcgcgc atggcggcga acgcctcggg cccatggagc ttgatttgac cggtcttgcg
      481 cagcggcgcg gttgccgcat cgacgtagtt catcgcgatt cctaagggat ccaggcgccg
      541 cccggccgcc accaaatgta ggcgctctcc acggctgcgc aagcctcaaa agcgtgcgcg
      601 cgcgggggga cttgtgtggt gatgagcttt aagtggtaat gacagacgca tgcgctgagg
      661 cggtgcagct tagcccaact actcagccta acaccggcac cgcgctagcc acggcgattt
      721 cggtggctga aatggcgcag cggtaggcga ttgcttcgac gccgagcatc cgcgcccggt
      781 cgaaggcagc cccgtagcgc gggtcaatgt cgcgggcgag cgccagccgg tcggccgagc
      841 cgatctggat cagaaacagc agcacggctc gttggccgtg cgtcgccatg gcggaaagct
      901 cttcgaggtg cttggcgccg cgtgccgtga ccgcgtcggg gaactcggcc aacgctttcg
      961 tgcgcattag gtggacgttt ttcacctcca cgaaacagga cggcttgccc tgttgttcca
     1021 ggagaatatc cacccgggaa ctgcggccat atttgacctc tcgtcgcagc gagctgtagc
     1081 cacgcagctc cgggatcgcc ccgtcggcga ccgctgccgc ggccagcgca ttggggtgag
     1141 ccgtgttgac cccgacaagc tccatgccgg aaccgagatc gacttccgcc agctcccacg
     1201 agtaggccag tttgcgggct ggatttgccg attttgacag ccatatcttc gtgcccacgg
     1261 cggcgagacc cgtcatggcg ccaggattag cgacatgaac cgttgtctcc acgccgtccg
     1321 ggagcaccac gtcggcgagg aagcgcttgt aacggcgcag caaggtggcg ggaatgagcg
     1381 gggaaaggaa tcgcatgaga cttattgatt ttgcacatga tgttgtccga aaagtctgca
     1441 actcttcggg atcaaacgcg ctagcggatc acgccgccga gttcgtcctc gatatggatg
     1501 cggatgatct cgtcgaacga tctctccgcc acaaagccga gcgcacgggc gcgcgccgca
     1561 tcgaaccgat ggggccaacc gtcgacgatg cggatcacca gcggatcggg ctcacggcgg
     1621 atgcgggcca cgaccttgtc gccagcgatc cgccgcagcg ccgcgatctg ctcagcgacc
     1681 gtgcatgaga cgcccggcat cgtgaggttg atgcaagggc cgagcagttc gggagaaagc
     1741 ctggccgcgt ggataagaaa gccgaccgcg gcacggggcg acgcatgggt atgcaggatt
     1801 ttttcatcca ctggcagcat cgcctcctgg ccggccaatg gctcccggat gatgcttgag
     1861 aaaaaacccg aagccgcctt attgggcttg ccggggcgca cgcaaatggc cggcagccgc
     1921 aacccgacgc catcgaggaa gccgcggcgg gtatagtcgg cgagcagcag ttcgcagatc
     1981 gctttctgtg tgccgtagga ggtatggggc gtgagatgaa actcatcccc gatcacgtct
     2041 ggaaaaggcc cgccgaatgc cgcacaggac gacgtgaaaa tcaatttcgg gcgatagccg
     2101 ctgccagtat gacgtaccgc ctcaagcagt gcccgcatgc cgtcgagatt gctgcgatag
     2161 cctttgtgga aatcgagttc ggcttccgcc gaaacgatgc cggcgatgtg aaagatcacg
     2221 tccggccggc cggcaacaag cttttcggcg acgccgggcg ttgccagatc ttcggtcacg
     2281 atattgaccg gaccggaaaa tccaagcggc tgcgggggcg tgacaacatc ggtcagggtc
     2341 agcttgttga tcgcgcaacc gtgcaacacg ccgtccttga ccagtcgttc catcaatttg
     2401 cggccgatca taccggcggc gccggtgatg atgatctcca tcgtgttgag tccgtctagt
     2461 tggcatccct tgttggggca aattttgttc tcatggaatc acacagcggt gtcattgcct
     2521 gcgaagaggg gcgacccggt aacctgcgga ttactggatt cccgttttcg ccggaatgac
     2581 accggagaat gcacgtgcag ctccatttca ccgaaacccg ctctaaatca aatctttgac
     2641 agctcatagg tcgacggtac gaacatttcg tccacgttca acttccgcgc caaaagcccc
     2701 tgcgcgaagg aatagcgcgt cagcgtttcc agcacatggc ggttctcggc aacgccgtag
     2761 ctccaaaaat cttcgcccat caccttacgc acccggtcgt attcggcaac gctccatggc
     2821 agcgatgtgg cgagatgacc gatctgaccc agttccttca tgcaaagctc cttggctttg
     2881 aggaaggcct tgtagacgct gacggcgagc cacgggtggc gctccaccag ggaccggcgg
     2941 atgcccacgg cgtgcatgat cgggaatatg cgcgtcttgc aaaaataagc
//
LOCUS       DATILV010000908         3730 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_734408, whole genome shotgun sequence.
ACCESSION   DATILV010000908 DATILV010000000
VERSION     DATILV010000908.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3730
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_734408"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..227)
                     /locus_tag="VLJ17_21805"
     CDS             complement(<1..227)
                     /locus_tag="VLJ17_21805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018456409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lectin"
                     /protein_id="HSV25649.1"
                     /translation="MKTNLQLSILAATAFVSLGAVVNAQQIQQAPDTTFFVTSEGPGK
                     GGDLGGLAGADAHCQALAGRIGAGSKTWHAYL"
     gene            complement(342..1328)
                     /locus_tag="VLJ17_21810"
     CDS             complement(342..1328)
                     /locus_tag="VLJ17_21810"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV25650.1"
                     /translation="MGLTICGRMILVLTFVGIACTSTMRAKAQTSSWPQRVVRIIVPF
                     GPGSATDINARLIAERVAGRWGKSVVVDNRPGGDGIVAIEAFTSANDGHTLLFASAGT
                     FTVHPDEQEKLPYNARRDLLPIASVSADVLAVSVPDALEAGSLAELAVLARHRPGQLN
                     AAAAQGLTDFLLSGFLAKSGVHMPRIPYRDILQAPSDLAEGRIHLLMTPLAIVLPLMS
                     TGRIKVLAVSSHSRAAVAPDVPTAVESGYPAMTLEELNGLFGPRDMARDLRERIAADV
                     IAVAADPVISVRLGLIGQIIKLGGPAAFGARIEQQRAILAAMERSFGLSQVP"
     gene            1453..2469
                     /locus_tag="VLJ17_21815"
     CDS             1453..2469
                     /locus_tag="VLJ17_21815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HSV25651.1"
                     /translation="MAQQTSRGFLSLAAVIAVATIAPFDAAAVAQDVKHYRFAYDQPK
                     TTGYGVAGDTFADKLKELSRGTMLIDQYPGAQLGQEPQVLQLVKAGDIDFCITSSANS
                     STLSPQAGVMSLHFLFRSEDHLKKALADPKIAQAVKAMIEDTVQGAHVIALATLGLRN
                     MYAKREVNRIDDIKGLKVRVQATATEDTMFPAYGAQTVHMPFGSVYTSLQTGVVDIAE
                     NGVNVYLANKHYEVAPVLSMTEHEANNSLVWVSDKLWKSLSADQRKWVQAAADEVNRS
                     QPGKAIDLEHQSADRLKAIGVKVVTGVDKSGFQKVADPYLDRLAKELGAHAVTIKDLI
                     RGVN"
     gene            complement(2527..2790)
                     /locus_tag="VLJ17_21820"
     CDS             complement(2527..2790)
                     /locus_tag="VLJ17_21820"
                     /inference="COORDINATES: protein motif:HMM:NF023494.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3551 domain-containing protein"
                     /protein_id="HSV25652.1"
                     /translation="MPLPMILLALSATVLLGDIQAAYAQSQFPYAQYSFPWCSIRGRS
                     VQSCYYTSWEQCRTTLSGIGGLCIQSPYYRAAPSLARRRTAEH"
     gene            3376..3708
                     /locus_tag="VLJ17_21825"
     CDS             3376..3708
                     /locus_tag="VLJ17_21825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein SepF"
                     /protein_id="HSV25653.1"
                     /translation="MSNVDWQNGVNNLNRNPTDYYKPRALHVDPDEDDDAALHPTNAP
                     VVDLRKLEEELGRRRLDEIAGVVRALTYGEMMELAASMWNVRPDGGNLTEHNLPAVLY
                     RWSTSRQS"
BASE COUNT          792 a         1057 c         1130 g          751 t
ORIGIN      
        1 agataggcgt gccacgtttt gctacctgcg ccgatcctgc ctgccagcgc ctggcagtgt
       61 gcgtccgcgc ccgcgagacc acccagatcg ccgcccttgc cggggccttc gctggtgacg
      121 aagaatgtcg tgtcaggcgc ctgctggatc tgttgggcgt ttacaaccgc accgagcgag
      181 acgaacgccg tggcggccag gatggacaat tgcaggttgg ttttcatgga acctcctccc
      241 agttgacgat gccggtttct atcgattttc tgccctatcg ccccgaacat cataccgctt
      301 ggccgggtgc tttggctagg agtctacgcc ggtaaggccg ctcacggcac ctggctgagg
      361 ccgaacgacc tctccattgc ggccaggatc gcgcgctgtt gttcgatacg ggcaccgaat
      421 gcggccgggc caccgagttt tatgatctgg ccgatcaaac cgagccgcac cgagatcacg
      481 gggtcggcag ctaccgcgat aacatcggcg gcgatgcgct cgcgcaagtc acgcgccata
      541 tcgcgcggtc cgaacaagcc atttaattct tcaagagtca tggcggggta accggactcg
      601 acggcagtag ggacgtcagg cgcgacagcc gcgcgactgt ggctgctgac cgccaacacc
      661 ttgatgcgac cggttgacat caggggcagt acgatggcga gcggcgtcat caataaatgg
      721 atgcgcccct cagcaagatc gctgggcgct tggaggatat cgcgataggg aatccgcggc
      781 atatgcacgc ctgatttggc gagaaagcct gacagcagga aatcggtcaa gccctgcgca
      841 gctgccgcgt tgagctggcc tggccggtgg cgggcgagca ccgcaagctc ggcgagcgac
      901 cccgcttcca gggcgtccgg caccgagacg gcgagaacgt ccgcggacac gctcgcaatc
      961 ggtagcaggt cgcgtcgcgc attatagggc agcttctcct gctcatcggg atggaccgtg
     1021 aacgtgccag cggatgcaaa cagcagcgtg tggccgtcat tggcgctcgt gaaggcctcg
     1081 atcgccacaa tgccatcgcc gccgggccgg ttgtcgacca cgaccgactt gccccaacgt
     1141 ccagcgactc gttcagcaat tagccgggcg ttgatatcgg ttgcactgcc gggcccaaat
     1201 ggcacgatga ttctgacgac tcgttgcggc catgacgacg tttgcgcctt tgcacgcatc
     1261 gtcgaagtgc acgcaattcc tacaaaggtg agcacaagga tcattcgtcc acagattgtc
     1321 aagcccataa agtccccttt gctccgacgg cgccgctgca agccccgcag catgtgataa
     1381 tgtgattgta gagatcagca agacgtcaaa tcattcaggg aggaagttat ggtcagaatt
     1441 tattggcgct gtttggcgca gcaaacatcg cgcggattct tgagtctggc agccgtaata
     1501 gcggttgcaa cgattgctcc gttcgacgcg gcagccgtag cccaggacgt gaagcactac
     1561 cgttttgcct acgaccagcc gaaaacgacc ggttatggcg tcgcgggcga cacctttgcc
     1621 gacaagctca aggaattgag tcggggaacg atgctgatcg atcaatatcc gggcgctcag
     1681 ctcggccagg agccgcaagt gcttcagttg gtgaaagcag gcgacatcga tttctgcata
     1741 acctcatcgg cgaattcctc gacgctgtcg ccgcaggccg gcgttatgtc gcttcatttc
     1801 ctgttccgct ccgaggacca cttgaagaaa gcactggcag acccgaagat cgcccaagcc
     1861 gtgaaggcca tgatcgagga tacggtgcag ggcgcccatg tgattgcgct ggcgacgcta
     1921 gggctacgca acatgtacgc caaacgtgag gtcaatcgga tagacgatat caagggtttg
     1981 aaggtccgtg tccaggcgac cgcgaccgag gacaccatgt tcccggcgta cggggcgcag
     2041 accgtgcaca tgccgttcgg cagcgtctac acctcgttgc agacgggcgt cgtcgatatc
     2101 gccgaaaacg gcgtcaacgt ttatcttgcc aacaagcact acgaggttgc gccggtcctt
     2161 tcgatgacgg agcacgaggc gaataacagc ctagtttggg tcagcgacaa gttgtggaag
     2221 agcctttccg ccgaccagcg caaatgggtc caggcggcgg ccgacgaggt caatcgcagc
     2281 cagcccggca aggcgattga tcttgagcac caatcggctg acaggttgaa agcgatcggg
     2341 gtcaaagtag tgaccggtgt tgacaagtca ggcttccaga aggtggcgga tccctatctg
     2401 gatcggctcg ccaaggagtt gggtgcacac gctgtcacga tcaaagatct gatccggggg
     2461 gtcaactagg cggccgtcgc gccccgggtt tgtcttcaac cggccccggc cgtcccgggc
     2521 ccattttcag tgctcggcag tgcgtcggcg cgccagcgac ggtgcggccc ggtaatatgg
     2581 gctttgaatg cagagtccgc cgattccgga caatgtcgtc cggcattgtt cccaactcgt
     2641 gtaatagcag gactgaacac ttcgacctct gatcgagcac catggaaacg aatattgcgc
     2701 gtacggaaat tgcgactgtg cgtatgcggc ctggatgtcg cccagcagca cggttgcaga
     2761 gagcgcaagc aagatcattg gcaggggcat ggctttgctc cattgcattg atggaacggg
     2821 accgccgcca cacttgatcg gatgcgccgg tagtgtgcgc actgaggcga tccctcttaa
     2881 agttaagaga cgtggcaaag gtttcaagca gcccggtcgc ccaggatgcg ccctttaggc
     2941 gccgcggaac agccgcctgc gactaaaatc tattgtgaat ttgttttcct gcagtggctc
     3001 ctcatgacct atgtcgtgag tgatgcgaac tttcgtatct ccaaaattga gatggaaatt
     3061 ctaccctcca gaacaacacg acagttttca tttcagactg ttgcggggag ggatggtgat
     3121 gcaagcattt atcgatttgt ccccgcaatc ccgtgtacaa ctagggccaa tcaaggtgtt
     3181 ggacgccata tttctgccgc tttgcgctct ttaccgtagt atttgtagta cttttgattc
     3241 gattagcgag cgctgtgtcc gctaatcggc ctgtgattat tgaaacatga tagtgcggtt
     3301 cgactgcgta ggactgctct ccatcgacgg atgctgagcg atgcatggag gcagtcaaat
     3361 gacggagtag cggaaatgag taacgtcgat tggcaaaatg gagtgaacaa ccttaaccgg
     3421 aacccgacgg attactataa accccgggcc ttgcacgttg atcctgatga agacgacgat
     3481 gcggcgcttc acccgacgaa tgcgccggtt gttgatttgc gcaagctgga agaagaactc
     3541 ggccgccggc gtctggacga aatcgcgggt gtggtgcggg ccctcaccta cggggaaatg
     3601 atggagctcg ctgcctccat gtggaacgtc aggccggacg gagggaacct cacggaacac
     3661 aacttaccgg ccgtgctcta tcgctggtcg acgtcacgcc aatcctaaag aaaccgagat
     3721 tcgggtccgc
//
LOCUS       DATILV010000909         2609 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_223201, whole genome shotgun sequence.
ACCESSION   DATILV010000909 DATILV010000000
VERSION     DATILV010000909.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2609)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2609)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2609
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_223201"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            554..2608
                     /locus_tag="VLJ17_21830"
     CDS             554..2608
                     /locus_tag="VLJ17_21830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012321604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HSV25654.1"
                     /translation="MKDDVSSPWHEGELAIQRSVGVAEQMDAQGRIRLRKFLLEQHRE
                     FFPLLPFIVLGAVDPDGEVWATLRAGPPGFLTSPDPKILSFRLNRDVDDPADIGMNDG
                     DSIGVLGIDLSTRRRNRLNGIIRRSDAESFSLEVIQSFGNCPRYIQHRNPIFTRHIDA
                     PGKFPPQMLPSLAGRAREIITQADTFFVASYIDAKDGSRQVDVSHRGGRPGFVRLDED
                     DTLTIPDFNGNLFFNTLGNFLINPKAGLLFVDFSTGDELQITGEAKVILDSPEIAAFQ
                     GAERIWQFRARRAIYRPDGLPLRWSLEGDGASPSSLMTGDWQEAKKRLHASELSNSWR
                     VFRVSNIKDETALTRSLELEPTDGGGLIRHLAGQHIPIRIQPAGSAAPLIRTYTLSVS
                     PSENKYRISVKREGIVSRCLHQLNVDDTIEVRSPAGGFTIDATQERPAVLLAAGIGIT
                     PMRAMLRYLVDENARTRHVRQTWLFQSARLKAELVFSEEIAGIIEVSKGYAKYISVLS
                     DRDAVAGKDADHVGRIDLALLKRVLPFDDYDFYLCGPSSFMQETYDGLRRLKIADERI
                     HAEAFGPSSLRRSTDKPTSRSIDVPATESTRVIFSESGKEARWHPGTGTLLELAEDRG
                     LSPSYGCRSGTCGTCSIKILKGTVAYLSQPSFPVPVGEALICCSIPGQTPGEDPSLHL
                     AV"
BASE COUNT          557 a          733 c          748 g          571 t
ORIGIN      
        1 gcttgtctgc tggctggtat cgatcgccaa ggcggaaccc aagaaggact ggcggctgtc
       61 gcaagcttcc gtcgctcaat acgcggaata gtcaaatgct tgatccgtgt acatcggcgc
      121 tcccctctgg aaggtattaa cgcttatctc ggacctccga aggctgaacc aaagggtcga
      181 cgaatgggcc ggtttgcaaa cgaggcttcg attgtagacc cgtcaccccg agtgccgatc
      241 aaaagtgact tttgcgattg gctaccctat cgaaggccct caaggctgcg aaggcttgac
      301 gcaagcttgc tggcccacct caagatgtgt agagctggcg ctgacgtgaa tagcggttat
      361 ccagggcgga ttcgtgcggt cgtgaatcta tcgcgaccgc actccggctc gtcggacaac
      421 ggacatagca gttaaaatgt tgggaatgct tgtgtgaagg gcaattccga tgccggcttc
      481 gaaacctgaa ttagcggcat gagttgttcc gggcgaactg gcttcccgtt ggcctcggtg
      541 ttggggcgaa gtcatgaaag acgacgttag ttcaccatgg catgaagggg aacttgcgat
      601 acaacgtagt gtcggcgttg ccgagcagat ggatgctcag ggccgaatac ggttgcgcaa
      661 attccttctc gaacaacacc gtgaattctt tcctctcttg ccgttcatcg tattgggcgc
      721 ggtcgatcct gacggcgagg tctgggcgac tctgcgagct ggtcccccag gcttcctcac
      781 ctcgcccgat ccgaagatcc tttcatttcg tctcaaccgc gatgtggacg atcctgcgga
      841 tatcggcatg aacgatggcg actccatcgg cgttttgggc atcgatcttt ccacacgccg
      901 gcgcaatcgg ctcaacggca taatccggcg ttctgatgca gaaagctttt cgcttgaggt
      961 tatccagagc ttcggaaatt gtccgcggta cattcaacac cgcaatccga tattcacccg
     1021 ccatatagac gcaccgggga agtttccacc tcaaatgttg ccttcgcttg ccggccgcgc
     1081 tcgcgagatt atcacgcaag ccgacacctt ctttgttgct tcctatatcg acgccaagga
     1141 cgggtcccga caagtagatg tatcgcaccg cggcggcaga ccgggatttg tgagacttga
     1201 cgaggacgat acgctcacca tcccggattt taacggaaac ctctttttca atacgctggg
     1261 gaatttcctg atcaatccaa aggcaggact tctgttcgtc gatttttcaa ccggtgatga
     1321 actgcagatc acgggagagg caaaagtcat tctcgattct ccagagatcg ccgcatttca
     1381 gggcgcggag cggatatggc agttcagagc tcgacgggcg atctaccggc cggacggact
     1441 gccgctacgc tggtcactcg aaggagacgg agcgtcaccc agttcactta tgacgggcga
     1501 ttggcaagag gcgaaaaagc gactccatgc cagtgaattg tccaatagct ggcgcgtgtt
     1561 tcgggtcagt aatatcaagg atgaaacggc tcttacccgt tcgctggaac tggagccgac
     1621 cgacgggggc ggtctgatac gccacctggc cggccaacat attcctatcc gtatccagcc
     1681 tgcgggcagc gcagctccgc tgatccggac ctacacgctc tcggtgtccc cgtcggagaa
     1741 caaatatcgc atcagcgtta agcgggaggg tatcgtttcg aggtgccttc atcagctaaa
     1801 tgtcgacgac acaattgagg tgcgctctcc cgccggcggc ttcacgattg acgcgacgca
     1861 ggagcgcccc gcggtcttgc tcgcggcggg tatcggcatc acgcccatgc gcgcaatgct
     1921 ccgctacctc gtggatgaga acgcaaggac acggcacgtc cgacagacat ggcttttcca
     1981 atcggcacgc ctaaaggccg aattggtctt cagcgaagag atcgcaggca tcatcgaggt
     2041 atcaaagggt tacgcaaaat acatcagcgt actaagtgat cgcgacgcgg tcgccggaaa
     2101 ggacgccgat cacgtcgggc gcatcgacct ggctctgcta aagcgcgtgc tgccattcga
     2161 cgattacgat ttttatttgt gcggcccgtc gtcctttatg caggaaacct atgacggact
     2221 gcgtcggttg aagatcgccg atgagcgcat ccatgccgaa gcttttggac cgagctcgct
     2281 gcgacgaagt acggacaagc cgacgtcacg ttctattgat gttcctgcca ccgagtcgac
     2341 gcgcgttatt tttagtgagt ctggcaagga agcacgctgg caccctggca ctggaacgct
     2401 tctagagctc gctgaggacc gtgggctatc gccatcctac ggctgccgga gcggaacctg
     2461 cgggacctgc agcattaaaa tattgaaggg tactgtcgcc tacctgtcgc agccatcgtt
     2521 ccccgtgccg gtaggagaag cgctgatttg ctgctcgatc cctggccaaa cgccgggcga
     2581 agatccttcg ctgcacttgg ctgtgtaga
//
LOCUS       DATILV010000910         8524 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_735262, whole genome shotgun sequence.
ACCESSION   DATILV010000910 DATILV010000000
VERSION     DATILV010000910.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8524
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_735262"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..993)
                     /locus_tag="VLJ17_21835"
     CDS             complement(<1..993)
                     /locus_tag="VLJ17_21835"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008143969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HSV25655.1"
                     /translation="MKFTLSWLKDHLDTNAPLDAIVYKLTMIGLEVENVENRAEALAP
                     FTIARVISAEPHPNADRLRVCMVDTGSGDPVQVVCGAPNARAGMKGVFSPPGTFIPGK
                     NITLGVGTIRGVESRGMLCSGFELQLSEDHEGILDLQADAPVGVRYAQWANLDDPVIE
                     INLTPNRPDCTAIHGIARDLAAADVGKLKDTPIKPIAGAFACPVSVTLDFGATPSLCS
                     GFALRLVRGVKNGASPDWLQRRLAAIGLRPINALVDVTNYITYDRGRPLHVFDAAKVK
                     GNLVVRRALPSESLLALDGKTYALDDSMCVIADEHGVESLAGIMGGEASGCSEAT"
     gene            complement(1048..2130)
                     /gene="pheS"
                     /locus_tag="VLJ17_21840"
     CDS             complement(1048..2130)
                     /gene="pheS"
                     /locus_tag="VLJ17_21840"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018323478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HSV25656.1"
                     /translation="MIDITALEHELMRTIDTAGDEAGLEAARVAALGKRGSISALLAT
                     LGKMSPDERKAKGPIINGLKERITEAVAARREVLKSAALERRLNTEAIDVTLPAPEPP
                     ADIGRIHPISQVMDELTAIFADMGFAVAEGPDIETDDYNFTKLNFPDGHPAREMHDTF
                     FFNPKPDGSRLLLRTHTSPVQVRTMLAHKPPIRVICPGRTYRCDSDQTHTPMFHQVEG
                     LVVDKDSHLGHLKWILAEFCKAFFEVDDVKMRFRPSFFPFTEPSLEVDIQCRRDKGEI
                     RFGEGDDWLEILGCGMVHPNVLRNCGIDPHQFQGFAWGIGIDRIAMLKYGMHDLRAFF
                     EADVRWLSHYGFRPLDFPTLAGGLSA"
     gene            2120..2329
                     /locus_tag="VLJ17_21845"
     CDS             2120..2329
                     /locus_tag="VLJ17_21845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25657.1"
                     /translation="MSIIMPSLNAAMAASRRLRNDQLCESSQLLMGAAMFSKFLRVVP
                     FFVMAVAPAAATTLDCQTLDCDNIL"
     gene            complement(2642..3001)
                     /gene="rplT"
                     /locus_tag="VLJ17_21850"
     CDS             complement(2642..3001)
                     /gene="rplT"
                     /locus_tag="VLJ17_21850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011155609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HSV25658.1"
                     /translation="MARVKRGVTGHAKHKKVLKATKGYYGRRKNTIRIAKQAVEKANQ
                     YAFRDRKRRKRTFRALWIQRLNAAVREFGLTYSRFIAGLGKAGVTVDRKVLSDLAIHE
                     PAAFQAIVDKAKAALAA"
     gene            complement(3084..3284)
                     /gene="rpmI"
                     /locus_tag="VLJ17_21855"
     CDS             complement(3084..3284)
                     /gene="rpmI"
                     /locus_tag="VLJ17_21855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HSV25659.1"
                     /translation="MPKLKTKSGAKKRFKVTATGKVLFAQSGKRHGMIKRTTKQIREH
                     RGTKVMFKTDGDRIKKYWLPNG"
     gene            complement(3568..4107)
                     /gene="infC"
                     /locus_tag="VLJ17_21860"
     CDS             complement(3568..4107)
                     /gene="infC"
                     /locus_tag="VLJ17_21860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HSV25660.1"
                     /translation="MRRPMRAAPPVAKDGPRTNDDIREREVHLIDKDGTNRGIVSISE
                     ALALAQEVGLDLVEISPNAKPPVCKLLDFGKYKFQEQKKQAEARKKQKIVEIKEVKFR
                     PMIDDHDYDVKMRSMIRFFGEGDKVKVTLRFRGREMAHQELGIRLLDRLKGDTEKIAK
                     VEMDARFEGRQMVMVLAPK"
     gene            complement(4324..5568)
                     /locus_tag="VLJ17_21865"
     CDS             complement(4324..5568)
                     /locus_tag="VLJ17_21865"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSV25661.1"
                     /translation="MARSADEISRPVRPDAGGAAVAQLGTRRLVVLIVVPTVEAGAAD
                     EGAVDIARILGANGHRAIVVSSGGRLEPSLLASGAELVRLDVASRSPLAILRNAFVLK
                     RCITQHRCTVVHALARAPAWSALLAAGVAGVPLVTTWYNGFREQNIFKHFYNGVMARG
                     ERIIALSDQIADAIAARYSGTSGRIVVVESHIDVDRFDPALVTRQRIATVRSAWDIDA
                     DTRAIVVIGRILRRKGHHVVVRAAGRLKSMGLRNFTFVFVGEDLGHSSYSGELWDLVQ
                     ATGTSDVIRIVGPPDDVPAAYSAAVAVVAPAIQLQGSQRDVLEAMAMARPVIASDLAA
                     GPDIVLAPPAVAEDRMTGLSFRSGHDSELAAALIRLLSAPESTRMAIGRRGRERAIAR
                     FGTEDATTQMLALYTELARART"
     gene            5722..6570
                     /locus_tag="VLJ17_21870"
     CDS             5722..6570
                     /locus_tag="VLJ17_21870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV25662.1"
                     /translation="MRQDFGLTAIDERDSAPLVTEFLHVGGGEDARKIAVRRRIGATP
                     GVLWLGGFKSDMAGTKAIALDRWAAVHRRNCVRFDYSGHGESGGKFTAGTISRWLDES
                     IAVFDAYCEGPQVLVGSSMGGWLALLLARELRRREPPRSPASLTALVLIAPAVDFTEE
                     LMWKRFPAAVKRQLESNGVWERPSQYSAEPYPITAALIEDGRRHLLLGGLIETACPVR
                     ILQGGADPDVPWHHAVELVSRLAHDDVVLSLIKDGDHRLSRPEDIERLITAVAEFCCC
                     RSIEVL"
     gene            6748..7464
                     /locus_tag="VLJ17_21875"
     CDS             6748..7464
                     /locus_tag="VLJ17_21875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25663.1"
                     /translation="MACLIMLGFAALASLGISLSAGSLRSATPTPAEIVASRFPSTDA
                     ALRIVPATFSTASVMPVERWETFDQGALEPIRGTLDAMKAADPAWPSETTAPPISEPA
                     EQAATLVEVVKPESPKLPATNGAPHRVMGRFSNVLNDAQIASIKRRLKLTAEQDQMWP
                     AVEAALRKIVYTKNAMDPRAHAAQQGGARTAYVDPSSTEVQQLKYAALPLIMRLNDEQ
                     KREVKMLAYVMGLEALVSQF"
     gene            complement(7455..8372)
                     /locus_tag="VLJ17_21880"
     CDS             complement(7455..8372)
                     /locus_tag="VLJ17_21880"
                     /EC_number="1.1.1.290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSV25664.1"
                     /translation="MTALVCLGFGYSAQHYVALYGRRFAGTVGTTRSEDKAAALRSQQ
                     FGGNMVEVLVFDGVTASPPVAAAIADATVLLISIAPDRNTDPVLAHLRDTIAAAPQLE
                     SIVYLSTIAVYGNHDGRWIDETTPLTPALTRASDRIEAERAWQALGEAHCIPVAIIRI
                     AGIYGPGANALETVKAGRARRIIKPGQVFNRIHVGDLAQIIDKVVDMALTRHVGGIFN
                     AADDEPAVPGDPIAFAANLLGVVPPPEISFEEAEKTMTPFAVSFYGESKRVRNDRIKS
                     VLGVSLRYPTYREGLRALATKMPETSGQN"
BASE COUNT         1626 a         2599 c         2597 g         1702 t
ORIGIN      
        1 ggttgcctcc gaacaaccgc tggcctcgcc gcccatgatg ccagcgagcg attcaacgcc
       61 gtgctcgtcg gcgatgacgc acatggaatc atcgagcgcg taggtcttac cgtcgagcgc
      121 caacagggat tcgctcggca aggcgcggcg caccacgaga ttgcctttga ccttggcggc
      181 gtcgaacacg tgcagcggcc gaccgcgatc ataggtaatg tagttggtga catcgaccag
      241 cgcattgatc ggccgcaggc cgatcgcggc cagccggcgt tgcagccagt ccgggctggc
      301 gccgttcttg acgccgcgca cgaggcgcag cgcgaaaccg gagcacagcg agggcgttgc
      361 gccaaaatcg agcgtgacgc taaccgggca cgcaaaggcg ccggcaatcg gcttgatcgg
      421 cgtgtccttt aacttaccta cgtcggctgc agcaagatcg cgggcgatgc cgtggatagc
      481 ggtgcagtca ggccggttgg gcgtaagatt gatctcgatc accgggtcgt cgagattcgc
      541 ccactgcgca tagcgcacgc cgaccggtgc gtccgcttga agatccaaaa tgccttcatg
      601 gtcctcggac agttgcaact caaaccccga acacagcatg ccccggctct cgacgccgcg
      661 gatggtgccg accccaagtg tgatgttctt gcccggaatg aaggtaccgg gcggcgaaaa
      721 tacccccttc atacccgccc gcgcattcgg ggcaccgcaa acgacctgca cggggtcgcc
      781 tgatccggtg tcgaccatgc acacgcgcaa ccggtccgca ttgggatgcg gctcggccga
      841 gatcacccgc gcaatggtga agggcgccaa cgcctctgcc cggttctcaa cattctcgac
      901 ctcgaggccg atcatggtga gcttgtacac gatggcgtcg agtggcgcgt tggtgtcgag
      961 atgatccttg agccaggaga gtgtgaactt catcgcaatt cctcacgatc ggcgctgcct
     1021 tgtctcccaa gcggggcagg ggattgctta cgcgctcaac cctcccgcca gcgtcggaaa
     1081 atcgagtggc cggaagccgt agtgggacag ccagcgcaca tcggcctcga agaaggcgcg
     1141 cagatcgtgc atgccatatt tgagcatggc gatgcggtcg atcccgatgc cccaggcgaa
     1201 gccctgaaac tggtgaggat cgatgccgca attgcgcaac acgttcggat gtaccatgcc
     1261 gcagccgaga atttcgagcc agtcgtcgcc ctcgccgaag cggatctcgc ctttgtcgcg
     1321 acggcactgg atgtcgactt cgagcgacgg ctcggtgaat gggaagaacg acggccggaa
     1381 ccgcattttc acatcgtcga cctcgaagaa ggccttgcag aactccgcaa gaatccactt
     1441 caaatggccg agatgagagt ccttgtcgac gacgagcccc tcgacctgat gaaacatcgg
     1501 cgtatgtgtc tggtcactgt cgcaacgata ggtgcgaccc gggcaaatta cccgaattgg
     1561 cggcttgtgc gcgagcatgg ttcgcacctg tacgggcgat gtgtgggtac gcaagagcag
     1621 tcgcgaaccg tccggcttcg gattgaaaaa gaaggtatcg tgcatctccc gcgccggatg
     1681 accgtccgga aagttgagtt tagtgaaatt gtagtcgtcg gtttcgatgt cgggcccctc
     1741 ggcgaccgcg aaccccatgt cggcaaagat cgccgtgagt tcgtccatca cctggctgat
     1801 cgggtgaata cgaccgatgt ccgctggagg ctccggagcc ggcagggtaa cgtcgatggc
     1861 ctcggtgttg agccttcgtt caagcgccgc gcttttgaga acctcgcgcc gcgctgcaac
     1921 agcttcggta atcctctcct tgaggccgtt gataattggc cccttcgctt tgcgctcatc
     1981 aggcgacatc ttgccaagcg tcgccagcag cgccgaaatc gagccccgct tgccaagcgc
     2041 ggcaacgcgc gcggcttcca gccctgcctc gtcgcctgca gtgtcgatgg tgcgcatcaa
     2101 ctcgtgttca agtgccgtga tgtcgatcat catgccctca ttgaatgccg caatggcggc
     2161 ctcgcgccga ctacgaaatg atcagctgtg cgaatcatct cagctgttga tgggcgcagc
     2221 catgttcagc aaatttctcc gcgtcgtccc gtttttcgtg atggctgtcg cacccgccgc
     2281 ggccaccaca ctggattgtc agaccctcga ctgcgacaac attctttgag cttctggagc
     2341 gggcgccgac atgccagaag tcgttggcgc tgttccaggc tccttcggcg cgagtggcga
     2401 cctggcgttg agcgaggtcg tgattcgtaa atgcgaaggc tttttttgac caagctcggc
     2461 aagtcgcaac ggcaggccga tgaccaacaa cagaaacggt gctcgcgcaa gtatcggaaa
     2521 tgggtcggcc cgctcttttg aggccttgtg cagcgccact ttggcaacag atgatgcgca
     2581 acgctatatc aaaggcccca aattatcggt cggaccagcg ccagcacgtc gcttgggatc
     2641 atcaagccgc cagggcggcc ttggctttgt cgacgatagc ctggaatgcc gccggctcgt
     2701 ggatggcaag atcagacagc accttacgat cgaccgtgac tccggctttg ccgaggccgg
     2761 cgataaatcg actgtaggtc aacccgaact cgcgcaccgc cgcgttgaga cgttgaatcc
     2821 agagcgcccg gaatgtgcgc ttgcggcgct tgcgatcgcg aaacgcatat tggttggcct
     2881 tctcgaccgc ctgcttggcg atccgaatgg tgtttttccg ccggccgtaa tagcccttgg
     2941 tggctttgag gaccttcttg tgcttggcgt gcccggtgac accccgtttg acgcgcgcca
     3001 tggcgaatct cctttggaag tctggcgttt aatgatgaca gcagccgcat gaaatgcggc
     3061 ccgcacgatg gtcagcgcgg cggtcagccg ttcggcaacc agtatttctt gattctgtcg
     3121 ccgtcggtct tgaacatcac cttggtgccg cgatgctcgc ggatctgctt ggtggttcgc
     3181 ttgatcatgc cgtggcgctt gcccgactga gcgaacagca ccttgccggt ggcggtgacc
     3241 ttgaagcgct tttttgcgcc cgacttcgtc ttaagtttgg gcatttggct ctcctattgc
     3301 gaccgggaca cgacctaacg gccgggttcc ccggtattgc tcgcctgagc ttgtgctcga
     3361 ttgagcagat gttgatgagc gtgccgcgtg agcacttcgc cgccgccacg gcagcccttt
     3421 agccgggcag cgggaggccg aggttatggc agagcgtccg gcaaatggca attgccagcg
     3481 cccaaaagga acctggtcac agatgcccgt cacgagtcgc ctgcatgggg cgctgtatct
     3541 cgcgggagtc cgatgctggt ggaagcccta ttttggtgcc agcaccatga ccatctggcg
     3601 gccttcgaag cgggcatcca tctcgacctt ggcgattttt tcggtgtcgc ccttcaggcg
     3661 atccagcaac ctgataccga gttcctggtg cgccatttcg cggccgcgga aacgtaacgt
     3721 caccttgact ttgtcacctt ccccgaagaa gcgaatcatt gagcgcatct tcacgtcata
     3781 atcatgatcg tcgatcattg ggcggaactt gacctccttg atctcgacga tcttctgctt
     3841 tttgcgcgct tcggcctgct tcttctgctc ttggaatttg tacttgccaa aatcaagcag
     3901 cttgcagacc ggcggtttgg cattcgggga gatctcgacg agatcaagac ccacctcctg
     3961 cgccagcgcc aacgcctcag aaattgaaac tataccacgg ttggtaccgt ccttatcgat
     4021 cagatgaact tcgcgttcgc ggatgtcatc gttggtgcgc ggaccgtctt tggcgacggg
     4081 cggcgcggct ctcatcgggc gacgaatggc tgtcttctcc tttgatgttg ttgccgttgc
     4141 ccctcacgca gcaaccgttc ggacgggccc cggccggtgt cgatcggctc gggccacgtc
     4201 cgcgtcggct ctgccacgcg gaggtccctg aagatcggta taaaaggtta acaagtcaac
     4261 ggtgttacgt gaattttgcg atgcctcgag aggtcctgca gatcgtcggc ccggaggttc
     4321 caatcatgtc cgcgcccgtg caagttccgt gtagagggca agcatttgcg tcgtagcgtc
     4381 ctcggtgccg aatcgggcga tggcgcgctc gcggccgcgt cgcccaatgg ccatgcgagt
     4441 gctctccgga gccgacaaca acctgatcag ggcggccgca agttcgctat catgcccgct
     4501 gcgaaagctt aggccggtca tgcggtcttc cgcgactgcg gggggcgcca acacaatgtc
     4561 gggtccggcc gcgaggtcag aggcaatcac cggtcgcgcc atcgccatcg cttcgagcac
     4621 gtcccgctgc gagccttgca gctgaatcgc gggagcaacc acggcgaccg ccgcgctgta
     4681 ggcggcaggc acgtcgtctg gtggacctac aatccggatc acgtcggacg tcccggtcgc
     4741 ctgcaccaaa tcccacagtt cgccgctata gctggaatgg ccgagatcct cgccgacaaa
     4801 aacgaaagta aaattgcgca accccatact tttgagacga ccggccgcgc gtaccacgac
     4861 gtggtgccct ttacggcgca ggatacgtcc gatcaccacg atcgcgcggg tatctgcgtc
     4921 aatgtcccaa gcggatcgca ccgtcgcgat acgctgccgc gtcaccagtg ccggatcgaa
     4981 cctgtcgaca tcgatatggg actccaccac gacaatgcgt cctgacgtgc cgctgtaacg
     5041 cgccgcgatc gcatcggcga tctgatcgct tagcgcaatg atccgctcgc cgcgtgccat
     5101 tacgccgttg tagaaatgtt tgaagatgtt ctgttcccga aatccattgt accaggtggt
     5161 cacgagcggc acgcccgcta cgccggctgc gagcagcgca ctccacgccg gtgcgcgcgc
     5221 aagcgcgtgc acgaccgtac agcgatgttg agtaatgcaa cgtttgagaa cgaaggcatt
     5281 acgcaaaatg gccaacggac tgcgacttgc gacgtcgagc cgcaccagtt cggcaccgct
     5341 tgcaaggaga cttggttcga gtcgaccacc acttgacact acgatggcgc gatgtccgtt
     5401 agcgccaagt atgcgggcga tatccacagc cccttcgtcc gcagcgccag cttcgacggt
     5461 cggcacgacg atcagaacca ccagcctgcg cgttccaagc tgcgcaacag ccgccccccc
     5521 cgcgtccggt cgaaccgggc gcgatatttc atcggcggaa cgtgccacgg tcgatatggt
     5581 cgttactccc cgctccggat atcaacgtcc ccatcggacg ctttgccatt ggcgttgatc
     5641 acaacgctcg caccaaacgg catgatatag accgggaggc ggcttgccgc aacgttcttt
     5701 ggacacgctg ttggagatgc aatgcgacaa gattttggat tgacggccat tgacgaacgc
     5761 gattcggcgc cgctggtgac cgaatttctg cacgtcggcg gcggcgagga tgcgcgcaag
     5821 atcgcggtga gacggcgaat cggcgcaacg cccggcgtcc tatggctcgg tggattcaag
     5881 tcggacatgg ccggcaccaa ggcgatcgca ctcgaccggt gggcggcggt gcataggcgc
     5941 aattgcgtgc gcttcgatta ttcggggcac ggcgaatcag ggggaaaatt caccgcgggc
     6001 accatcagcc gttggctcga cgaaagcatt gcggtgtttg atgcatattg tgaggggccg
     6061 caagtgctgg tcggctcgtc catgggcgga tggttggcgc tgctgcttgc gcgtgaactc
     6121 agacgccggg agccgccgcg cagcccggca tcgttgaccg cgctcgtact gatcgcacca
     6181 gccgtggact tcaccgaaga attgatgtgg aagcggtttc ccgccgctgt gaagcggcaa
     6241 ctcgaatcca acggcgtttg ggagcggcct tcgcaatatt ccgcagaacc ttatccgata
     6301 accgcggccc tcatcgaaga tggtcgccgg catcttctgc tcggcggcct gatcgaaaca
     6361 gcatgtccgg tgcgtatcct gcaagggggc gcagatccag acgtgccatg gcaccacgcg
     6421 gtcgaactgg tttcgcgcct tgcacacgat gatgtcgtat tgtcattgat aaaggatggc
     6481 gatcaccgcc tgtcacgacc tgaggatatc gagcgcctca tcaccgccgt tgcggaattc
     6541 tgttgttgca ggtcaattga ggtgttatga cacctctcgg cttctggttt tcgccccggc
     6601 cagcacgtgt ttggggaaag tgtggcaaat tttacttctg gttagccata attaaactat
     6661 cttcgtgaag aagttggtgg gtatcgaagg attcgtttgg gggacagcat agtgcatcat
     6721 gtcttcgcaa gagcgggcaa gttcgcgttg gcttgcctca tcatgctggg ttttgctgca
     6781 cttgcgagct tggggatcag cttgagcgct gggtcgctgc gatccgccac ccccactccg
     6841 gccgaaatcg tggcatcgcg attcccgtcg acagacgccg ctttgcgtat cgtcccggcg
     6901 acattctcaa cggccagcgt gatgccggtc gagcgttggg agacattcga tcagggcgcc
     6961 ctcgagccca ttcggggcac cctcgatgcc atgaaggcgg ccgatccggc gtggcctagc
     7021 gagaccaccg cgccgccgat ttcggaaccg gcggagcaag ctgcgaccct cgtcgaggtc
     7081 gtaaagcccg agtcgccgaa gctgccggcc acaaatggtg ctccacaccg ggttatgggc
     7141 cgtttcagca atgtgctcaa cgacgcccag attgccagca tcaagcgccg actaaagcta
     7201 accgcagaac aggaccagat gtggccggcg gtcgaagcgg cgctacgtaa gatcgtgtac
     7261 acaaagaatg caatggatcc gcgcgcccat gccgcccagc aaggtggtgc ccgcacggcc
     7321 tatgtcgatc cgagcagcac cgaggtccaa caactcaaat acgccgccct tccgctgatc
     7381 atgcgcctta atgacgagca gaaacgtgaa gtcaaaatgt tagcatacgt gatggggctg
     7441 gaagccttgg tgtctcagtt ctgaccggag gtttcgggca tcttggtcgc gagcgcccgc
     7501 aggccttcac gataggtcgg atagcgaagc gaaacaccca gcacggattt tatgcggtcg
     7561 ttgcggaccc gcttgctttc gccgtaaaag ctgaccgcaa agggcgtcat cgtcttctca
     7621 gcttcctcga aagaaatttc gggcggcggc acgacgccga gcaggttcgc cgcaaaggcg
     7681 atagggtcgc cgggcaccgc gggctcatca tcggcggcgt tgaagattcc gccgacgtgg
     7741 cgcgtcaaag ccatgtccac caccttgtcg atgatctggg caagatcgcc cacgtggatg
     7801 cggttgaata cctgtccggg cttgatgatg cggcgcgcgc ggcccgcttt cacagtctcg
     7861 agcgcattgg cacccggccc gtaaattccc gcgatacgga tgatggccac cgggatgcag
     7921 tgagcttccc caagggcctg ccaggcgcgc tccgcttcga tccggtcgct ggcgcgtgtc
     7981 agcgccgggg tcaagggcgt ggtctcgtca atccatcggc cgtcgtgatt gccatagacc
     8041 gcaatggtcg aaagatacac gatcgattcg agctgaggcg cagccgcaat ggtgtcgcgc
     8101 aaatgcgcca gcaccgggtc ggtgttccga tccggtgcaa tggagatcag caatacggtg
     8161 gcgtccgcga tggcggcggc aacgggcggt gaagccgtaa cgccgtcgaa gaccagcacc
     8221 tcgaccatgt tgccgccgaa ttgctgcgag cgcagtgccg ccgccttgtc ctcgctgcgc
     8281 gtggtgccga cggtgccggc gaagcgcctg ccgtagagcg cgacgtagtg ctgcgccgaa
     8341 tagccgaagc caaggcaaac cagggcggtc acgcgcaaat gtcctccaat gcccattcat
     8401 cccgtacgat cggatcggtt tcggcggtcc catatttcgc tgccaatacc gcgaagtccc
     8461 gctttgcgat tagctgccct agcgcccaca cggccgcacc gcggacaatc gccgaggggt
     8521 ccgc
//
LOCUS       DATILV010000911         3274 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4067293, whole genome shotgun sequence.
ACCESSION   DATILV010000911 DATILV010000000
VERSION     DATILV010000911.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3274)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3274)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3274
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4067293"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..182
                     /locus_tag="VLJ17_21885"
     CDS             <1..182
                     /locus_tag="VLJ17_21885"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV25665.1"
                     /translation="QHRLAELGSKSPIVFLSSHSDIPTRVQAINAGAEDFLTKPVPKN
                     KLLDAIERAIFRYKN"
     gene            complement(532..693)
                     /locus_tag="VLJ17_21890"
     CDS             complement(532..693)
                     /locus_tag="VLJ17_21890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25666.1"
                     /translation="MNYIVVLSLILTGFAVVGVFVDIPLASDYAFWFLLVAYLLVLTA
                     WRGRFRHDD"
     gene            complement(764..997)
                     /locus_tag="VLJ17_21895"
     CDS             complement(764..997)
                     /locus_tag="VLJ17_21895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25667.1"
                     /translation="MTWSSYLERPILLPDGRSRETPAGAWRLMLSPPGGEAPQKWQHL
                     AGLLMTAARTAHRNLVAITTGQIERRESDHTVR"
     gene            complement(1254..1445)
                     /locus_tag="VLJ17_21900"
     CDS             complement(1254..1445)
                     /locus_tag="VLJ17_21900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25668.1"
                     /translation="MATAAGQRPVPLPYRHRANVPTPQHRNLLAPAPERLHEEITAGY
                     NDMIYGRANARHQAHRSAN"
     gene            1678..2451
                     /gene="ppk2"
                     /locus_tag="VLJ17_21905"
     CDS             1678..2451
                     /gene="ppk2"
                     /locus_tag="VLJ17_21905"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006793 - phosphorus metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2"
                     /protein_id="HSV25669.1"
                     /translation="MKRKAYEKELHQLQVKLCQLQEWIKYKGLRVIIIFEGRDAAGKG
                     GTIKAITERLSPRVFRVVALPAPSEREKTQIFLQRYIQRFPAAGEVIIFDRSWYNRAG
                     VEYVMGFCTEADHERFLSLCPQIEKYIIDGGITLIKIWLEVGKDEQEKRFSARISDPL
                     RQWKLSPMDIESYRRWYDYSRARDMMLDTTDSEHAPWHIVRSDDKRRARLNCISHILA
                     VLAPNEVPRQKIKLPKRSNKRKYDDHKSLEGRNFVAEIY"
BASE COUNT          719 a          897 c          991 g          667 t
ORIGIN      
        1 tgcaacaccg cctagccgag ctgggttcaa agtcgccgat cgtcttcttg agtagtcatt
       61 cagatattcc gacgcgcgtg caagcgatca atgccggcgc ggaggatttt ctgaccaagc
      121 cggtaccgaa gaacaagttg ctcgacgcga tcgagcgcgc aatttttcgt tataaaaatt
      181 agatgagaac agctcaatac attgcgtgct ctcgtagcca ctttcccgca tgacgggggc
      241 gcacgccgac aattctctct tacgaactgc cgacgtcacc ttctgtgcag tttttcgggc
      301 gtcggaatgg cgagaccacc catgcgctct ggcggccagc gtccgagaag cgccaaggca
      361 cgaaatcgcg gtcagtggtg cgccggcggt gctgccggcc gcgagctctg gccggtcacc
      421 ggatgcggct gggcacccga tggggtagtg tccagaatct ttcgcacatt cggttttggc
      481 tgagcggcgc ccggcactgg ctcaagccgt gatggcacct caatggcgat ctcagtcgtc
      541 atgtctaaac cggccccgcc acgcggtaag gaccaaaagg tacgcgacga ggaggaacca
      601 aaacgcgtaa tcgctggcaa gggggatgtc aacgaacacc cctacgaccg caaaccccgt
      661 cagaatgagc gagagcacaa ctatatagtt cattgcgcct ctctagccta catcatcggt
      721 tgcgcgccga cgtggcctcc cgccggacga atgaggccgg cggttaccgt actgtatggt
      781 cgctctctcg acgttcgatc tgaccggtcg tgatcgcgac aagattgcga tgagccgtcc
      841 gcgccgctgt catcaggagc ccggccaggt gctgccattt ttgcggggct tcgcccccgg
      901 gaggcgaaag catgaggcgc caagcgccgg caggggtctc tcgagaccgg ccatccggca
      961 gcagtatggg cctttccaga tacgacgacc aagtcatggg gaactcaatg ttctacaggc
     1021 tagggatggt atataagcaa cgaaatgagt cccagaatag gccctaaagt tcgctggacc
     1081 gagccggcct gtggatagaa cgaagccgct gggcggcgtt gaggcatgtt gcaggacagc
     1141 cagtctgcat gcttgcgtgc tcggaatgag caagatgtgc cgcccggaaa gtggttggaa
     1201 ttttgcgcgg cgcgatgtcc agccacttgg cgctatctga tcaggcggcg aggtcaattg
     1261 gctgatcgat gagcttggtg gcgagcgttt gcccgcccgt agatcatgtc gttgtagccg
     1321 gcggtgatct cctcgtgcag gcgctcaggc gcaggtgcca agaggttgcg atgctgcgga
     1381 gtaggtacgt tggcgcggtg gcggtagggc agagggactg gccgttggcc ggcggctgtc
     1441 gccacgtgcc gccgccttaa cggacgcacc ccaaagtggc tttgctccca gtctcgtcag
     1501 gcactagggc attgtcccta aggtcaatag accgtgtaga tgctcgatct atcgtcgtag
     1561 gcggctcgaa catctccgac ctgattgtac tgtgatctag gcgcgatgct gtgaaccatt
     1621 gtggagacga ggagcatgac gttgcaacaa aagtcgggca aggggaaagc cggcaaaatg
     1681 aaacggaagg cgtacgaaaa ggagcttcac cagctgcagg tcaagctttg tcaattgcag
     1741 gaatggatca aatacaaagg cttgcgcgtg atcatcattt tcgaggggcg cgatgccgcc
     1801 ggcaagggcg gaaccatcaa ggcgatcacg gaacgattaa gcccgcgcgt ttttcgcgtc
     1861 gtggcgcttc ctgctccgtc cgagcgcgaa aagacacaaa tattcctaca acgttacata
     1921 caacggtttc cggcggccgg cgaagtgatt attttcgacc gcagttggta caatcgcgcc
     1981 ggggttgaat acgtcatggg attttgcacc gaggcggatc atgagcgctt tctcagtctc
     2041 tgcccgcaga tcgaaaagta catcattgac ggcggcatca cgttgatcaa aatctggctg
     2101 gaggtcggaa aagacgagca ggaaaagcga ttttcggccc gcatcagcga tccgcttcgc
     2161 cagtggaaat tgagcccgat ggacatcgag tcttacagac ggtggtacga ctattcgcgg
     2221 gcgcgtgaca tgatgctcga cacgaccgac agtgagcatg cgccctggca catcgtccgc
     2281 tcggacgata agcggcgtgc gcggttgaat tgcatctcgc acattctggc agtgctcgcg
     2341 cccaatgaag tgcctagaca gaaaatcaaa ttgcctaagc gatcgaacaa gcgcaagtat
     2401 gatgatcata agtcactgga ggggcgcaac ttcgtcgccg agatatattg atctaccgaa
     2461 cctgcgcgac gattgacttc gaggctatcg acgcggagcg ctgtctgggg ccactccgag
     2521 attttcggag attgctgtga accctaccga aggcgcgcgg gcgcttctta tgaaatggat
     2581 caatgcctga ccgtcaaacc ccgtctcccc aggcggacta aggaaaatag catctccgag
     2641 cgataaactc agagcgcatc tcccgccgat ctgcggagct aaacgcaagg gccgagtttt
     2701 tggggcggca gctggcggcg tgaaactttt taatgttggt caaccggtgt gcgccgcatc
     2761 atttgcgcgg ctgcatccga caactcgagc ctcaaaatga gattgtcttg gcggcactgc
     2821 atcgataggc tccccgttcg taggtgtctg tcaaacaagg agaggtaaat gagacccgca
     2881 ctcaaatttt ttgtcgcact cacggcggcc gtggccgttg ccggcatagc atctcaaggt
     2941 tcagcccagc aaacacccca ggaccccgca cgggaggcgg ccatagcaaa gtgcgtcaaa
     3001 gtggtccaag aggcacgcgg atccggcccc gaccaagagg cacaacgtgt ctcagcgttt
     3061 aaggcctgca tgacggcagc tggccagagg ccgtaggttt ttggtgtcta tgctttgcgc
     3121 ttaatacgaa gttcgtgggc ttctttgcag attttcaaag gagcccacgt tcccctggtt
     3181 tttgacatga agagggcagc aatgcccgag aagcgatatc tggtctcgct ggaccaccgc
     3241 ggacctgcac gtggtgcaat cgttgatttg ttcc
//
LOCUS       DATILV010000912         3566 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2020548, whole genome shotgun sequence.
ACCESSION   DATILV010000912 DATILV010000000
VERSION     DATILV010000912.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3566
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2020548"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(559..933)
                     /locus_tag="VLJ17_21910"
     CDS             complement(559..933)
                     /locus_tag="VLJ17_21910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25670.1"
                     /translation="MERLFLPVLDPHLAADVHWLHAKYNFMRSNHEANVKGLLDAIGS
                     QHTGQTLFQLFRERPSRSVMIFPYIFAPRYLEDSDADTRPVEPYAATAKNKPMVGASG
                     KNFVPLNLMEHAYAAVPGLAAR"
     gene            complement(1292..2383)
                     /gene="ada"
                     /locus_tag="VLJ17_21915"
     CDS             complement(1292..2383)
                     /gene="ada"
                     /locus_tag="VLJ17_21915"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016555136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-binding transcriptional
                     regulator/O6-methylguanine-DNA methyltransferase Ada"
                     /protein_id="HSV25671.1"
                     /translation="MTATPTKTLKPAIPSVADDPRWARIVARDKAADGHLWYSVSTTG
                     VYCRPSCPSRTANPKNVQLHDSLESAKATGFRSCRRCNPDGPSIEAENAALVAKACRI
                     IEESEEEPSLEELADAIGRSPSYFHRLFKATTGLTPKDYAAANRAKKVRQGLASGNTV
                     TEAIYDAGFSSSGRFYEKSTDMLGMTPSQYRAGGANEKIRFAVGQTSLGAILVASSKK
                     GVASILLGDDPDELVRNLQDRFPKARLIGADRDYEALVARVVGLVETPGIGMNLPLDV
                     RGTAFQQRVWQALQEISVGETVSYAEIARRIGSPKAVRAVASACTANNLAVAIPCHRV
                     VRNDGSLSGYAWGVERKRILLAREAPRNA"
     gene            complement(2650..3099)
                     /locus_tag="VLJ17_21920"
     CDS             complement(2650..3099)
                     /locus_tag="VLJ17_21920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007812993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HSV25672.1"
                     /translation="MSKEEDNKTVVGRWFAEFWGKDVNLAVIDEIAAPDMLLKYSLHE
                     PRRGRDDIKAFMTDFRSGFPDLNFWGTADLIAEGDYVVGQWEGGGTHTGPAFDDFLIG
                     SLPAATGRRMHFTGTTVLKVINGKIVEEIGLDDGVTALTQLGLIKAA"
BASE COUNT          739 a         1004 c         1043 g          780 t
ORIGIN      
        1 cgagcaagat caatattgag atacagatgc cagaaatgcc accgccgctc gatctcaagt
       61 agaccgcggt atcgttcagc tgcctggaaa atgcgatccc acccaaccga acaaaaagcg
      121 cctgtgttcc atgacagagc aagataccat cagacccctc ttgatgatga cgaacttaga
      181 gttcatcgaa gaactgtttg atcggattga acgaggctct gactgctttt agggcgtcga
      241 atagtcgagg atggccattt gctaaactcc atatcaactc tcgtggactt gggtggatat
      301 ttgtatctaa caacttatcc ccttcgatag ggttgtcgag gtagtcaaaa agcggtttgt
      361 tcctgtgcga tctgtacata tttgtgacga ggagcccgag aaactcttcc tgattttcgt
      421 aacccccgct tactcccagg gagttatcaa cgccagaaac cattctcaat acgtgcacaa
      481 gctcatgtag taacatgtcg tcagtactgt cagtgcgccg gaacaatcca agtgggtcgg
      541 cttgcaaaaa gaagatatct accgcgctgc cagtcccggt accgcggcat atgcgtgctc
      601 catcaaattt aaaggcacaa agttctttcc gctggcgccc accatgggct tgtttttagc
      661 cgttgctgcg tatggctcta caggacgggt atcagcatca gaatcttcta aataacgagg
      721 agcaaatatg taaggaaaaa tcattaccga tcgactaggc ctttcgcgaa acagctgaaa
      781 tagcgtttgt cctgtgtgtt gggagccaat agcgtccagc agacctttga cgttggcttc
      841 gtgattggat cgcataaaat tgtatttcgc gtgcagccaa tgcacatcgg cagctaggtg
      901 cgggtcgagc acgggaagaa acaggcgttc caatcgccaa gctctggata ggcaatccaa
      961 atgctaggag ctgagggata gggggtagca tggactgctt ccgcgatctt gtcgagcatt
     1021 atccatctcc aagtaatttt tgtaaattgt ttaccgatat tgcgtaaccg ataggtctaa
     1081 accacaagtc gttatggtaa tcgggctggc attaacatga agccgtttct gcttcgcctg
     1141 aaggcagaag tgttgattag tcgctcgacg gagacggctg gttcagattg ccggtgcttt
     1201 tacttttgtt cgccgaaggg tgtgacgcgg ttctgaaggt gcattgccgt ttaccagggc
     1261 cagtcggtat tggagtggtc cgatccctcc atcacgcatt ccgcggcgcc tcccgggcga
     1321 gcagaatacg cttgcgctcg acaccccacg catatcccga taacgaaccg tcattgcgga
     1381 ccacgcgatg gcagggaatg gcgacagcga gattgttcgc cgtgcacgcg ctggcgacgg
     1441 cgcgcacagc cttcggcgat ccgatgcgcc gagcgatttc ggcgtaggaa actgtctcgc
     1501 cgacggaaat ctcctggagc gcctgccata cacgttgctg gaaggcggtg ccgcgaacgt
     1561 cgagaggaag attcatgccg atccccgggg tctcaacgag gccaacaacc cgcgcgacca
     1621 gggcctcata gtcacgatcg gcgccaatga gacgcgcttt gggaaagcgg tcctggagat
     1681 tgcggacgag ttcgtccgga tcgtccccga gcaggatcga agcgacgccc ttcttgctcg
     1741 aggcgacgag gatggcaccg agcgacgtct gcccaacagc gaatctgatc ttctcgttgg
     1801 cgccaccggc gcggtactgt gacggcgtca tgcccagcat gtccgtcgac ttctcgtaga
     1861 agcgtccgct ggaactgaag ccggcatcgt agatcgcctc cgtgacggtg ttgccagagg
     1921 ccagtccttg acggaccttc ttcgcgcggt tggcggcggc atagtccttc ggcgtcagcc
     1981 cagtggtggc cttgaacaag cgatggaaat agctggggct gcggccgatt gcgtctgcca
     2041 gttcctccag cgagggctct tcttcgctct cctcgatgat ccggcatgcc ttcgcgacca
     2101 gggccgcgtt ctcggcttca atcgaaggtc cgtcaggatt gcaacgcctg caagacctga
     2161 accccgtcgc cttggcgctt tccaggctgt cgtggagctg aacgttcttt gggttggcgg
     2221 tgcgcgaggg gcacgacggc cgacaataaa cgcctgtcgt tgaaaccgag taccagaggt
     2281 gtccgtcggc tgccttgtca cgcgcgacaa tgcgtgccca tcgaggatca tctgccactg
     2341 acgggatcgc gggtttcagg gtcttggtgg gcgtcgcagt catcatcttg catttctcat
     2401 atggtactgg atcgatggtg ccgccaattc tcgtcgggca cactccgatc cttgctttca
     2461 aatccgactg cccgcggccg agacgggcgt gagtagatgc gtttcgcggt gatcgacgag
     2521 aatgcccggc acagccaccc gatttccgcc tgaaagcaaa tgaggctcgc acggcggcgc
     2581 gcggacctca tccggcgacc aaaggatgag ccgccccctt tgggggcgac aagtggcgag
     2641 ctgcctcgat caggcggctt tgatcagccc aagttgggtc agcgcggtca cgccgtcgtc
     2701 gaggccgatc tcctccacga tcttgccgtt gatcaccttc agcaccgtgg tgccggtgaa
     2761 gtgcatcctg cggccggtcg cagccgggag gctgccgatc agaaaatcgt cgaaggcggg
     2821 gccagtatgg gtgccaccgc cttcccattg accgacgacg tagtcgccct cggcgattag
     2881 atctgccgtg ccccagaaat tgaggtcggg gaaccccgaa cggaaatcgg tcatgaacgc
     2941 cttgatgtcg tcgcggccac ggcgcggttc atgtagcgag tatttgagca gcatgtccgg
     3001 cgcggcgatc tcgtcgatga ccgcaagatt gacgtccttg ccccagaact cggcaaacca
     3061 gcggccgaca acggtcttgt tatcttcttc cttgctcatt ggaattggtc ctcatgatct
     3121 gtttcgtgag gatcatcgaa ttcggtcgat gacctgagaa aaggattacg cttgcggcga
     3181 tcgtgccaaa ctccggttct tgccttggaa tcgaaactcg cgagtgacgg cgacgatctg
     3241 gttgagcgac gcgcagccgc cgtaagggcg agccatgccg agtgggagcg cttttcctcc
     3301 gctcgcgagc aaaatcctcg atctcgggcg aaaaaccgac gaagccgaac atcggaatac
     3361 gggcggcact tcaaggatgg taacgcttgg agaaaatgtt cgggcgccaa cgtcgacgcc
     3421 ggttgagcgg ctttgagagc catgtcatcg gccgggtggc gacttactct ccgtccttgt
     3481 ctccagcgag ccgttccggc tcaccccgct cgcgggccgc tctgttcctc tcggatcacg
     3541 cgtcggccgg gctatgcgcg tgccgg
//
LOCUS       DATILV010000913         5179 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1507334, whole genome shotgun sequence.
ACCESSION   DATILV010000913 DATILV010000000
VERSION     DATILV010000913.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5179)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5179)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5179
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1507334"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..664
                     /locus_tag="VLJ17_21925"
     CDS             <1..664
                     /locus_tag="VLJ17_21925"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007634913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV25673.1"
                     /translation="ARTFYISIAVTLICLVLGYPLAYLISTLPPQRAGLLLIMVLLPF
                     WTSLLVRTTAWVVVLQGEGVVNTFLGWLGLIDKEHPLALIHNRVGVLIAMTHILLPFM
                     ILPIYSVMKSIPPSYMRAASSLGASPVRAFLRVYVPLSLPGVSAGCLLVFILALGYYI
                     TPALVGGPHDQMLSYFIAYFANQVTNWGMAAGLSAILLGLVLILYAVYSRIVGLDRLR
                     IG"
     gene            748..1500
                     /locus_tag="VLJ17_21930"
     CDS             748..1500
                     /locus_tag="VLJ17_21930"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018429126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV25674.1"
                     /translation="MAPILAIMPLSFNSEPFFTYPMPGFSLQWYREFFTSDVWQLALK
                     NSIIVAVFSTIAASTLGTLAALGLSRRDCPLRSSITAVLISPMIIPVVVSAVGIYYFF
                     AEIGLLNSLTGIVLAHTALGAPFVVITVTATLASFDYNLMRAAASLGATPVNAFFKVM
                     LPVILPGVASGALFAFVTSFDEVVVVLFLAGSEQRTLPRQMWSGVRETLSPTITAVAT
                     LLILFAVALLVMIQWLQHRSERQRAAAIALPA"
     gene            1509..2903
                     /locus_tag="VLJ17_21935"
     CDS             1509..2903
                     /locus_tag="VLJ17_21935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012654497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase subunit EutB"
                     /protein_id="HSV25675.1"
                     /translation="MAYTHTIGGGTHSFADLKDLLAKASPARSGDYLAGLAARTAAER
                     MAAKMCLAELPLTTFLTETVIPYETDEVTRLIVDRHDAASFTEIRHLTVGDFRNWLLL
                     DGTDEAALSRIAPGVTPEMAAGVSKLMRNQDLILVAKKCRVITRFRNTIGLPGRLSVR
                     LQPNHPTDDPKGIAASMLDGLLYGCGDAVVGINPATDSVPMLITLLRMMDEVRSRFEI
                     PTQSCVLTLVTNQIQAIERGAPVDLVFQSIAGTEKANTSFGISLAILREAYDAALSLR
                     RGTVGQNVMYFESGQGSALSAGANFGVDQQTCEARACAVAREFKPLLTNTVVGFIGPE
                     YLFDGKQIIRAGLEDHFCGKLLGVPLGCDVCHTNHAEADQDDMDTLLTLLGTAGVTFI
                     MGVPGADDVMLNYQSTSFHDALYLRAVMGLKRAPEFEAWLEKMQVTDPLGRLRELPCQ
                     HSFLRALTDMTQTA"
     gene            2906..3658
                     /gene="eutC"
                     /locus_tag="VLJ17_21940"
     CDS             2906..3658
                     /gene="eutC"
                     /locus_tag="VLJ17_21940"
                     /EC_number="4.3.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008851 - ethanolamine ammonia-lyase
                     activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase subunit EutC"
                     /protein_id="HSV25676.1"
                     /translation="MANIVHPNPWQQLREFTPARIALGRVGNSLPTDEVLRFGFAHAL
                     AQDAVHLPLDVATLDTALQVAGWQTLHVSSRAHDRATYLLRPDYGRRLSDASAAALVG
                     HADKSCDLVFVATDGLSALAVQRHTVPLLEAMRPLLRDAWSVGPVVVAEQGRVAIGDE
                     IGELLRARMTIVLIGERPGLSSPDSLGIYLTFAPKLGRSDAERNCISNVRPEGLSYDA
                     AATKLVWLLDQAIRSQLTGVGLKDHSDLVEVR"
     gene            3698..4789
                     /locus_tag="VLJ17_21945"
     CDS             3698..4789
                     /locus_tag="VLJ17_21945"
                     /inference="COORDINATES: protein motif:HMM:NF014381.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD/NADP octopine/nopaline dehydrogenase family
                     protein"
                     /protein_id="HSV25677.1"
                     /translation="MNKNVAILGGGHGAHAMAVDLMSRGFAVNMYEMPQFAQNLQKLF
                     DTNTIESSGEIKGRFQLAKVTSDIGEAIEGVKYIFVVTPAFAHDDYAKLLKGKANGDQ
                     VVVVVPGAFAGLLFKMLFGNQDCPVIVELNNLPYDARVMEQCRVAIHGFNRVGIAFMP
                     AEKGHGLIDEMSQFRPYAKVYSDVLEAGLSIVNPGVHTGPCLFSITAIENSAKHPFFL
                     YEHGVTPSACKLNIQIDNERKAVSKKLGYHNATPIEDFSGMEEGFTWQDLYMRIHGNI
                     SLTPISGPHEIMSRYFTEDAPYGLVPWSSIGKVVGVETPVIDSIINIYNVVHERNWWD
                     EGRTAKDLGLLGLTLAQIKEYVTSGNRPQ"
     gene            4944..5043
                     /locus_tag="VLJ17_21950"
     tRNA            4944..5043
                     /locus_tag="VLJ17_21950"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5023..5025,aa:Ser,seq:cga)
BASE COUNT         1022 a         1507 c         1518 g         1132 t
ORIGIN      
        1 cgccagaacg ttttatatca gcatcgcggt gacattgatt tgcctggtgc tcggctatcc
       61 gctggcctac ttgatctcga cgctgccacc gcaacgggcc gggctcctgc tcatcatggt
      121 gctgttgcct ttctggacct cgctgttggt ccggaccacc gcctgggtcg tcgtgttgca
      181 aggggagggt gtcgtcaaca cgttccttgg ctggttgggc ctgatcgaca aagagcatcc
      241 gctggcgctc attcacaatc gtgtcggcgt cctgatcgcg atgacccaca ttctcctgcc
      301 gttcatgatc ttgccgatct acagcgtgat gaagagcatc cccccaagct acatgcgcgc
      361 cgcgtcgtcg ctcggcgctt ccccggtgcg ggcattcctc cgagtgtatg tgcctctgag
      421 tctgccggga gtgagcgcgg ggtgcctgtt ggtgttcatc ctggcgctcg gctactacat
      481 cacgcccgcg ctcgtcggcg gaccgcacga ccagatgctg agctacttta tcgcgtactt
      541 tgcgaaccag gtcacgaact ggggcatggc ggcggggctg agcgcgatcc tgttagggct
      601 cgtgctgatt ctctacgccg tgtatagccg gatcgtcggc cttgaccgct tgaggatcgg
      661 ctgatggact catcgacgaa cgcgctggtg cgtagggcgg cctctgtctt gttcgtaact
      721 ttctgcggct gcgtgctgct gtttctgatg gcgccgatcc tggcgatcat gcctttgtcg
      781 ttcaactcgg agccgttctt cacgtacccg atgccgggct tctcattgca gtggtaccgc
      841 gagttcttca cctcggacgt ctggcaactg gcgttgaaga acagcatcat cgtcgcggtg
      901 ttctcgacga tcgccgcttc tacgctcggc acactggccg cgctgggtct cagccggcgt
      961 gactgtccac ttcgttcgag cattacggcg gtgttgattt ccccgatgat catcccggtc
     1021 gtcgtgagcg cggtcggcat ctactacttc ttcgctgaaa tcggcttgtt gaacagtttg
     1081 accggaatcg tgctcgcgca cacagcgctc ggcgcgccgt tcgtcgtcat taccgtgacg
     1141 gctacgttgg caagcttcga ctacaacctg atgcgtgccg cagcgagcct tggcgcgacg
     1201 ccggtcaatg cgttcttcaa ggtgatgttg ccggtgatct tgcctggcgt cgcatcaggg
     1261 gcgctgttcg cgttcgtgac ttcgttcgac gaggtggtgg tcgtgctctt tctcgccggc
     1321 tccgaacaac ggacgctgcc ccggcagatg tggagcgggg ttcgggaaac gctcagcccg
     1381 accatcacgg cggtggcaac gttgctgatc ctgtttgccg ttgcgttgct ggtgatgatc
     1441 cagtggctgc agcaccgttc ggagcggcag agagcggcgg ccatcgcgtt acccgcgtag
     1501 gcaacacgtt ggcctacacg cacaccatcg gcggcggcac gcacagcttc gccgacctca
     1561 aggatttgct ggccaaggct tcgccggcac gctccggcga ttatctggcc gggcttgctg
     1621 cgcgaacggc cgctgagcgg atggcggcga agatgtgtct tgccgaattg ccgctgacta
     1681 cgttcttaac cgaaacggtc attccctacg agacagacga agtcacgaga ctgatcgtcg
     1741 accgccacga cgccgcgtcc tttaccgaaa ttcggcacct aaccgtcggt gatttccgca
     1801 actggttatt gctcgacggc actgatgagg ctgcgctcag ccgtatcgct cccggtgtga
     1861 ccccggagat ggcagccggc gtcagcaaac tcatgcgcaa tcaggatttg attctcgtgg
     1921 cgaagaaatg ccgggtgatc acccgttttc gcaacacgat cggccttcca gggcggctgt
     1981 cggtgcgcct gcaacccaac cacccgaccg acgatcccaa gggcatcgcc gcctctatgc
     2041 tcgatggcct gctctatggt tgcggggacg cagtagtggg gattaacccg gcaaccgaca
     2101 gcgttccaat gctgatcacg ctgttgcgaa tgatggacga agtgcgcagc cgcttcgaaa
     2161 tcccgacgca atcgtgtgtc ctgaccctcg tcaccaacca gatccaagcg atcgaacgcg
     2221 gtgcgccagt ggatctcgtg ttccaatcga tcgcaggaac cgaaaaggcc aacaccagct
     2281 ttggcatcag cctcgccatt ttgcgcgagg catacgacgc ggcgctctca cttcggcgcg
     2341 gcacggtggg acagaacgtc atgtactttg aaagcgggca gggcagcgca ctctccgccg
     2401 gcgccaactt cggggtcgat cagcagacct gcgaagcccg cgcgtgtgcg gtggcgcgcg
     2461 agttcaagcc gttactcacc aacaccgtag tcggctttat tggcccggag tatttgttcg
     2521 acggcaagca gatcatccgt gccggtttgg aagaccattt ctgcggcaag ctgctcgggg
     2581 tacctctcgg ctgcgatgtg tgccacacca atcacgcaga agccgatcag gacgacatgg
     2641 acacgctgct gaccttgctc gggacagcgg gtgtcacgtt catcatgggt gttcccggcg
     2701 cggatgacgt catgctgaat taccagagca cgtcgttcca cgatgcgctc tacctgcgcg
     2761 cggtgatggg tctcaaacgc gcgccggaat tcgaagcgtg gctggaaaag atgcaagtaa
     2821 ccgatccact aggacgcttg cgtgaattgc cgtgccagca cagcttcctg cgcgcattga
     2881 ccgatatgac ccagacggcc tgaacatggc caatatcgtc cacccaaacc cttggcagca
     2941 gttacgcgag ttcactcccg cccgcattgc gctggggcgc gtcggcaaca gcttacccac
     3001 cgacgaagtg ctgcgcttcg ggttcgccca cgcactcgcc caggatgcgg tgcatttgcc
     3061 gctcgatgtc gcgacactgg ataccgcgct ccaagtcgcg ggctggcaaa cgttgcatgt
     3121 aagtagccgc gcgcatgacc gcgcaacgta cctcttgcgg cccgactacg ggcgccgcct
     3181 tagcgacgcc agcgccgcag cactggttgg acatgccgac aaatcatgcg atctcgtgtt
     3241 tgtggccacc gacggcttat cggcgctggc cgtgcaacgt cacacggttc ccttgctgga
     3301 agcgatgcgc cccttgttgc gggacgcgtg gtcagtcggg ccggtggtcg ttgccgaaca
     3361 gggtcgcgtc gcgatcggcg acgaaatcgg cgaactgttg cgggcaagaa tgacgatcgt
     3421 actgatcggc gaacggccgg gcctgagttc gcctgacagc cttggaatct atcttacgtt
     3481 tgcgccgaag cttggccgca gcgatgccga gcgaaactgc atttccaatg tacggccgga
     3541 aggtctgtcg tacgacgctg cggctacgaa gctcgtctgg ctgctcgatc aagcaatccg
     3601 atcacagctc accggcgttg gactaaagga ccatagcgat ttggtcgagg tccgctgaat
     3661 ccacactcta ctcagtccat tatctaggaa ttccggtatg aacaagaatg ttgccattct
     3721 cggcggaggt catggggcgc atgcgatggc cgtggaccta atgtcgcgcg gctttgccgt
     3781 caacatgtac gagatgcccc agtttgcgca gaatctgcaa aagctcttcg atacgaacac
     3841 cattgagtca tcgggcgaaa tcaaaggccg cttccagcta gccaaggtta cgagcgatat
     3901 tggtgaagcg atcgaaggag tgaagtatat cttcgttgtg actcctgctt ttgcccacga
     3961 tgactacgcg aagctgctaa aaggaaaggc caatggcgat caggtcgtcg ttgtggtccc
     4021 gggggcattt gcaggcctcc tcttcaaaat gttgttcggg aatcaagatt gcccagtcat
     4081 cgtcgaattg aataacctgc cctatgatgc gcgggtaatg gagcagtgca gggttgccat
     4141 tcacggattc aaccgagtcg gcattgcgtt catgccggct gaaaagggac atggattaat
     4201 cgacgaaatg agccaatttc gtccatacgc aaaagtctat tcagatgttc tggaggctgg
     4261 tttgagcatc gtgaatccgg gcgttcacac ggggccctgc ctcttcagca tcactgccat
     4321 cgagaactcc gcaaagcatc ccttttttct gtacgaacac ggtgtaacgc cctcggcttg
     4381 caagctcaac atacaaattg acaatgagcg aaaggcagtc agcaaaaagc tcggatatca
     4441 caatgcgact ccgattgaag atttcagcgg aatggaggaa ggtttcacgt ggcaagatct
     4501 gtatatgcgc atccatggca acatctctct gacgccaatc tccggacctc atgaaattat
     4561 gagtcgatat ttcacagaag atgctcccta tggactcgta ccgtggagtt caatcggcaa
     4621 ggtcgtcgga gtcgaaacac cggtcattga ttccattatc aatatttaca acgtggtaca
     4681 cgagcggaac tggtgggatg agggaagaac tgcgaaggac ttgggtctgc tcggactgac
     4741 gttggcacag atcaaggaat atgtgaccag cggaaacagg ccgcagtaag cgaccctcgg
     4801 ccaaggggtc tctcgcgata cctacatatg ctgccgattg ttcagaggca agctgtatac
     4861 gaaaatgtag ctgcgccgct ttgcatgccc ctgtgttgct ctgcattcga ctgcgatggc
     4921 gaggttgcgc gcgaaaacac catcccccac catacaagca gttgatgatg taatgaaatt
     4981 acgaatgctc ccaacggact gttaatccgc aggtcccagg ttcgagccct ggtcggggag
     5041 ccaaaatcca cacgggtttg cgcgtcgtcg gcctttcgct tcggcaatat tgcctccgct
     5101 tcttgggcaa tatcctcttg caccggttgg ctggccaaaa ggcagcatca atcaagaaga
     5161 tagagatgca gagagcggc
//
LOCUS       DATILV010000914         5587 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3039570, whole genome shotgun sequence.
ACCESSION   DATILV010000914 DATILV010000000
VERSION     DATILV010000914.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5587
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3039570"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            149..457
                     /locus_tag="VLJ17_21955"
     CDS             149..457
                     /locus_tag="VLJ17_21955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25678.1"
                     /translation="MVRRRDALDWVPAFAGWTEAAEKRDVEKDGRAAKDEARTVEKDD
                     GRAAANDGRAAAKEDGRAPPPNPRAKAEASVETRHELPSAASAVTARTDVRVMMVISR
                     "
     gene            883..1737
                     /locus_tag="VLJ17_21960"
     CDS             883..1737
                     /locus_tag="VLJ17_21960"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV25679.1"
                     /translation="MSKQRILVVGEQMGLRATLARWLIAAGYSVELAESAKHAREVLA
                     KEKIGLAIVATERLNDRDFVCEARTAVDRLILVTEPADDSSLSTAQVVRADGFLTRPL
                     REDDVLARIDAVLRTKADAAKAACELHFAGYTLDAIGRNCLDASGRVVTLTRAELSLL
                     LCLARRPGGVVSRDELTRAVAGRGAERGDRSVDVLISRLRRKIEADPKSPRIILTVPR
                     IGYTLVATPQIVAFTAPASNPETTASDAAAPGPQRQRTQPCRIRRRADRPSAPKRWRV
                     LPVSRPPC"
     gene            complement(1739..2854)
                     /locus_tag="VLJ17_21965"
     CDS             complement(1739..2854)
                     /locus_tag="VLJ17_21965"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HSV25680.1"
                     /translation="MKTRATKTRKLMASTAALVGLAWLANQIGSASAQELRAPAPATT
                     PITPHPSTQEPAHRVTFEQVVTMEQSLSNWGRWGKDDERGTLNLVTPEKTKQALGLVK
                     DGAVVSLARFASLEKAIDDFNFGPTRHEMWYGLAGPPKPGETRGALDTISYGIHDGTN
                     SHLDALCHYTLLRDGKVVVYNGHPSATEKGCSKNAIDRMGPGIATRAVLVDMPLLKGV
                     EWLDPHTPIYPEDLEAWEKFANVKIGSGDAVLVRTGRWALRAAKGPWFHAREGAGLHA
                     SVMPWLKQRDIALLAGDAVNDVQPSGIVGGSGEAANRPVHLISIAVMGMPLVDNGYFE
                     DAAREAAARKRWEFFMTVQLTRLEGGTASNFNALGVF"
     gene            complement(3028..4095)
                     /locus_tag="VLJ17_21970"
     CDS             complement(3028..4095)
                     /locus_tag="VLJ17_21970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25681.1"
                     /translation="MATYNILIMGASYGSLLASKLLFGGHSVKLVCLPAEADLINAEG
                     FRVRMPVKGRKDEIEIDSRKLPGKVSATGPAGVNPADFDLVGLAMQEPQYRSAGVREL
                     LDAVARSKMPCMSIMNMPPLPYVKRIPGLNYDGLKAAYTDPTVWDSFDPGLLTLCSPD
                     PQAIRPPEEKVNVLQVTLPTNFKVAKFDDDRHTALLRQLEKDVEAVRFDAPEGKIELP
                     VKLKVHDSIFVPLAKWSMLLAGNYRCITPDGIRTAQEAVHSNLAESRSVYDFVFDLCV
                     KLGAAPSDLVPFEKYAAAAMSLTRPASAARALQNGAPYIERADKLVQLIAAQKGLRHP
                     IIDAGVALVDARLEANRRKAA"
     gene            complement(4359..5225)
                     /locus_tag="VLJ17_21975"
     CDS             complement(4359..5225)
                     /locus_tag="VLJ17_21975"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HSV25682.1"
                     /translation="MRVLLLIIGIALWIVFVLSVVGLVYGILLGLFFFFVHMSLIAQL
                     RGSSIKLGPNQMPQLYERVVELSRRIGLKKVPDVYLRQSGGLLNAFATRFGRARFVVL
                     FSELVHACGDNLSALDFIIAHELGHIHRGHLNLRWLFAPALFIPFLGSAYSRACEYTC
                     DRYGFQAPNDPDRGLDGLCILAAGPQFVSAVNRQAFAAQDRDLNTAFMKLGEWFATHP
                     PLALRLAALASNLKPDRGGSITANVGALLMATLLFLIPIGGGAWIIKSAIDDVKKKIA
                     APLNPDIFPSPR"
BASE COUNT         1103 a         1673 c         1750 g         1061 t
ORIGIN      
        1 gccgccaccg ccgagtgcgc cgccaccgcc accgcctccg cccccaccgc cgaccttgac
       61 gccgccgccg ccggcaccac caccaccacc acctcctcct cctccgcctc cgccgccgaa
      121 ggtgttacgc acgctgggag cgctgccaat ggtccgcaga cgggacgcgt tagactgggt
      181 ccccgcattc gccgggtgga ctgaggccgc tgagaaacga gacgtggaaa aggacggccg
      241 tgccgcaaag gatgaggccc gcacagtcga aaaggacgat ggccgcgctg ccgcgaacga
      301 cggccgagcc gccgcaaagg aggatggccg ggcgcctccc ccgaacccac gggcgaaggc
      361 cgaggcgtcg gtcgaaacga ggcacgagct accgagtgcc gcaagcgctg taactgcaag
      421 aactgatgta cgcgtcatga tggtgatctc ccgttgagac gcgatgcgat gattcgcacc
      481 tgtcctttcg gtcacccgac tgcgggcgcg cgttcgcgtt cggacggcgc gtttacaatt
      541 tgtttacccg tcgtttacag gccttaaacg ccgccgatgg tgtacggggg aggcgcaacc
      601 cgcccgggcg ctcaatgggt tgcgctcaat gggttggggg tctcgacgcg gatgataacg
      661 gcgcaccgct acgcctccgg ttggctgcgg ggacgaggaa cggggttaac aattcagcac
      721 agtcaggtga actcggcggc cctgtccggc gacttaatga caagatggcg cacgaagggc
      781 aggaattgcc gcctccgcat ttcggaggcg caaacagggc taaccattta cgcgcggctt
      841 ttgcacgatt gcctgatggc gattggatga ggcggccaat tcatgagtaa gcagcggata
      901 ttggtagttg gcgagcaaat gggtttgcga gcgacgctcg cacgctggtt aattgccgcg
      961 ggttattcgg ttgaactcgc cgagagcgcc aagcacgccc gcgaagtgct tgcaaaggaa
     1021 aagatcgggc ttgccatcgt ggcgactgag cggctgaacg accgagattt cgtctgcgag
     1081 gcccgcactg cggtggaccg gttgatcctg gtgacggagc cggcggacga ttcaagcctg
     1141 tcgacggcac aggtcgtgag agccgacggc tttctcacaa ggccactgcg cgaagatgat
     1201 gtgctagctc ggatcgatgc cgtgttaagg accaaggcgg atgccgcgaa ggctgcttgc
     1261 gagctgcatt ttgctggcta caccctcgac gccattggcc gcaattgcct cgacgcaagc
     1321 ggtcgtgtcg taaccctgac acgggcggag ctctcgctgc tgttatgcct tgcgcgacgg
     1381 ccgggcgggg tggtgtcgcg cgatgaactg acccgtgcag tggctggccg cggggcggag
     1441 cgtggcgacc gcagcgttga tgtgttgatc tcacggctgc gccgcaagat cgaggcggat
     1501 cctaaatcgc cccgaataat tctgaccgtg ccacgcatcg ggtacacgtt ggtcgcaacg
     1561 ccgcagatcg tggcattcac ggcacctgca tcaaatcccg aaacaacggc gagcgatgcg
     1621 gccgcaccgg ggccacaacg gcagcggaca caaccgtgtc ggattcgccg ccgcgctgac
     1681 cgcccatcgg cgccaaaacg ctggcgcgta ttgcccgttt cgcggccacc ctgttagcct
     1741 aaaaaacccc cagcgcatta aagttcgacg ccgttccacc ctccagtctg gtcagctgga
     1801 cggtcatgaa gaattcccag cgtttgcgcg ctgcggcttc cctggcagca tcctcgaagt
     1861 agccgttgtc gaccagcggc atgcccatga cggcgatgga aatcagatga acggggcgat
     1921 tggccgcctc gccggaccca cccacgattc cagacggctg cacgtcgttg acggcatcgc
     1981 cggccaacag tgcgatgtca cgctgcttga gccagggcat cacggaagcg tgcaatccgg
     2041 cgccttcgcg ggcgtggaac cacggtccct ttgcggcgcg cagcgcccac cggccagtgc
     2101 gaacgaggac agcgtcgccg ctgccgatct tgacattggc aaacttttcc caagcctcga
     2161 gatcctccgg atagatgggc gtatgcggat cgagccactc cacgcctttg agcagtggca
     2221 tgtcgaccag gactgcgcga gttgctattc cgggtcccat gcggtcgatg gcgtttttcg
     2281 agcagccctt ctcggtggcg gacggatggc cgttgtagac cacgacctta ccgtcgcgca
     2341 gcagggtgta gtggcacagc gcatcgaggt gcgagttggt gccgtcgtga atgccgtaac
     2401 tgatagtgtc gagcgcgccg cgtgtctcgc cgggcttggg cggaccggca aggccgtacc
     2461 acatctcgtg cctggtgggg ccgaagttga aatcgtcgat cgccttctca aggctcgcga
     2521 agcgcgccag cgatacaact gctccgtcct tgacgaggcc tagcgcctgc ttggtctttt
     2581 ctggcgtcac caggttgagg gtccctcgct catcgtcctt gccccagcgg ccccagttgg
     2641 aaagcgattg ttccatcgtc acgacctgct cgaaggtcac ccgatgcgct ggctcctggg
     2701 tggacggatg cggtgtgatc ggcgttgtgg caggtgcggg cgctcgcagc tcctgcgccg
     2761 acgcactgcc gatctgattt gcaagccaag ccagtccgac aagcgccgct gtgctggcca
     2821 tcagttttct cgttttcgtg gctcgcgttt tcatcgcttc cctccgctgg tgcgaactgc
     2881 tttttcacct ctcgatgaaa tcgagaggtt ggggcctcgc aattacgcgc agaacggatt
     2941 gcgcttgtcg tcgagcgcgc cgcaaggaca agcccgatgg gtttcgctac cgctcaaccc
     3001 atcctacacg cttcgcgctt cgccggatca cgccgccttc ctgcggttcg cctccaaccg
     3061 cgcatcgacc agcgccacgc ccgcgtcgat gatcggatgg cgcaggcctt tctgggcggc
     3121 gatgagttgc acgagcttgt cggcgcgctc gatgtacggt gcgccgtttt gaagggcgcg
     3181 cgccgcggag gccgggcgcg tgagactcat cgcggctgca gcgtatttct cgaacggcac
     3241 cagatcgctc ggggcggcgc cgagcttgac gcagagatcg aacacgaaat cgtagaccga
     3301 ccgcgactcc gcaagattgg aatgcactgc ttcctgcgcg gttcgtatcc cgtctggggt
     3361 gatacagcgg taattgccag cgagcagcat cgaccacttg gcaagcggca cgaagattga
     3421 atcatgcacc ttgagcttta ccggtaactc gatcttgcct tccggtgcgt caaagcgcac
     3481 cgcctcgacg tccttttcga gttggcgcag cagtgcggtg tgccggtcgt cgtcgaactt
     3541 cgcgaccttg aagttggtcg gcagcgtcac ctggaggacg ttgaccttct cttccggcgg
     3601 gcggatcgcc tgcgggtcgg ggctgcatag cgtgagcaat ccgggatcaa agctgtccca
     3661 caccgtcgga tccgtgtagg cggctttcag tccatcgtag ttcaggccgg gaatgcgctt
     3721 cacatagggc agcggtggca tgttcatgat cgacatgcat ggcattttgg accttgccac
     3781 cgcatcgagc agttcgcgca ctccggcgga acgatattgc ggttcctgca tggcgagccc
     3841 gacgagatcg aagtcggcgg gattgacgcc ggccgggccg gtggcggaga ccttgccggg
     3901 cagtttgcgc gagtcgatct cgatctcgtc cttgcgtccc ttcacgggca tgcgcacgcg
     3961 aaagccttcc gcgttgatga ggtcagcctc cgccggcagg cagaccagtt ttacactatg
     4021 gccgccgaac aacaacttgg aggcgaggag cgatccatag gaagcgccca taatcaggat
     4081 attgtaggtg gccatgacgg cgactccgcg gttcgagtga gcaagggggc accggcgatt
     4141 atccggaatt tcgggatagt gccgcttcgg atctcgcgct cacatcagaa tcatgggagt
     4201 ctcgtcggcg tcaaggcccc gtgtgcacga gtggtttcgt cggcgccgtg gctgacgacg
     4261 ggaatattgg ccacgcccgc gggtgcggcg ccgttagcaa cgtcccgatg ttacgggcga
     4321 tttctccgac gtccgccgtc gcatctgccc aatcgggatt aacgtggaga cggaaaaatg
     4381 tcggggttca agggagcagc gatctttttc ttcacgtcat cgatcgccga tttgatgatc
     4441 caagcgccgc cgccgatcgg aatcaggaag agcagcgttg ccatcagcag ggcacccacg
     4501 ttcgccgtta tgctacctcc tctgtctggt ttcaaattcg acgcaagtgc ggcgagacgg
     4561 agggccaacg gtgggtgcgt ggcgaaccat tcccccaatt tcatgaaagc cgtattgaga
     4621 tcacggtcct gagccgcaaa tgcctgtcta ttgaccgcgg aaacaaattg ggggccggca
     4681 gccagaatgc ataacccgtc cagaccgcgg tcggggtcgt tgggggcctg aaagccatac
     4741 cggtcgcacg tgtactcgca cgcgcgtgag taggccgaac ccaagaaagg aatgaaaagc
     4801 gccggtgcga acagccaccg caagtttaaa tgaccccgat gaatgtgccc taattcatgc
     4861 gcgataatga agtcaagcgc acttaggttg tcgccgcagg catgaaccag ctcggagaag
     4921 agcacaacaa acctcgctct tccgaaacgg gttgcgaaag cgttgaggag cccaccggac
     4981 tgacgcaagt agacgtcagg cacctttttc aagccgatcc gccgagaaag ctcgacaacc
     5041 cgttcataga gctgtggcat ttgatttgga ccaagcttga tggagctgcc gcgcagctga
     5101 gcaataagac tcatatgcac gaaaaagaaa aataatccga gcaggatgcc gtaaaccaag
     5161 ccaaccacgg aaaggacgaa cacgatccat aaagcaattc cgataatcag caataaaacg
     5221 cgcaacggca cttcggccgg actaggagtg acggtaatgg cgccgctcgc aacttgggac
     5281 cgcaaaggtt ggctggcgaa gccactatct tggcgttgca tcggaagacc tcctgacaag
     5341 cggaaacgag acgatcggtt cccgggaatt gtggaaaggt ttgaggcgaa accggaggag
     5401 gaaagtgtca gccatgtttt gaggggaggg tgtcctaaaa gcacatcaag accacactgt
     5461 gacgaattat gggcttcctt ggcgaagctg ctccttcctt ttagagaggc gtgcctcttt
     5521 cttggaccag atcatgctca aaatcgcctc aaaatgccat cgagatgtct tgcagtcgtt
     5581 tgtcgac
//
LOCUS       DATILV010000915         5005 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2269471, whole genome shotgun sequence.
ACCESSION   DATILV010000915 DATILV010000000
VERSION     DATILV010000915.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5005
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2269471"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            100..1869
                     /locus_tag="VLJ17_21980"
     CDS             100..1869
                     /locus_tag="VLJ17_21980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012557498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HSV25683.1"
                     /translation="MPARRRFQLVLVKPSHYDDDGYVIRWWRAMIPSNSLAAVYGIAA
                     DCAERQVLGQDVAIDIEAIDETHTRVNVAELLERFRSHGSFGLLALVGVQSNQYPRAL
                     DIARPFRAAGIPVAIGGFHVSGCVSMLDGRAVELDACRDMGVSMFAGEAEGRLELVLR
                     DAAAGCLAPLYDFMRDLPALEGTPVPFLPKQYVERTLGLSTSFDAGRGCPYQCSFCTI
                     INVQGRKSRFRTADDVEHLVRLNWAQGINKFFITDDNFARNKAWESIFDRLIALRERD
                     GIRLGLMIQVDTLCHKLPNFIEKAKRAGVTRVFIGLENINPDNLAAAKKRQNRITEYR
                     RMLLAWKAQGILTFAGYILGFPSDTPETIRRDIAIIQEELPLDIIEFFCLTPLPGSED
                     HQVLWKKGVAMERDLNTYDVEHVCTAHPCMSREQWEAIYREAWSLYYTPKHMETLLRR
                     AVATGVPVNSLIKVLVNFATTALLENVHPLQGGIFRLKHPSERRPGLSREHAFIFWPR
                     FVWETLSKHAVIVATIARLLVLKFVITRDLAARTYKDTALTPVAEDEEVTLNLFTNTT
                     GARAAVTHLKKIDRLTGTFRSTQ"
     gene            complement(1997..2575)
                     /locus_tag="VLJ17_21985"
     CDS             complement(1997..2575)
                     /locus_tag="VLJ17_21985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25684.1"
                     /translation="METTVEFVRNHNPAFDPVAAMIAKGPTPKWLILGLEHFSLAVAG
                     GDFTKEDHKKFVEVLEQMEQACDTLIQWLPIYEHMGCGVQCPEEVWIARHVLPLIKAD
                     LPHTSRKIGRRPNTGQGVCAAVIVEAWKLCRGKAAPRSEALYEACQAYWSACGRAERG
                     ETDDRTNWRRNVKQAIGADNGWIRQAFLAVQD"
     gene            2861..3480
                     /locus_tag="VLJ17_21990"
                     /pseudo
     CDS             2861..3480
                     /locus_tag="VLJ17_21990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018406476.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
     gene            complement(3507..3710)
                     /locus_tag="VLJ17_21995"
     CDS             complement(3507..3710)
                     /locus_tag="VLJ17_21995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25685.1"
                     /translation="MRYPGQFESYELFNRSVWLPSSKQRLMADEAFRDLLKKHNRPSD
                     LKWAVRQSAEADAVKRFGIGESD"
     gene            complement(3733..3809)
                     /locus_tag="VLJ17_22000"
     tRNA            complement(3733..3809)
                     /locus_tag="VLJ17_22000"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3773..3775),aa:Arg,seq:cct)
     gene            complement(3938..4103)
                     /locus_tag="VLJ17_22005"
                     /pseudo
     CDS             complement(3938..4103)
                     /locus_tag="VLJ17_22005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011239636.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            4222..4611
                     /locus_tag="VLJ17_22010"
     CDS             4222..4611
                     /locus_tag="VLJ17_22010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25686.1"
                     /translation="MLGLLKVIAAAALALVLWLMISEAVVRPAAQQEPPRPPEPIPKS
                     TALTTTPTTPATPTAPATAVDIAKLNDTIMKLIAGVDRLNQQLGVRDAPAKPGQSSAA
                     TDPPRRREIDPRQTWRRQSWRDSACWR"
BASE COUNT          971 a         1499 c         1433 g         1102 t
ORIGIN      
        1 tctgtgcgca gcggttagtg aacatcgccg gcttgctgag caggtggaac ttttcgcaac
       61 cggcgcccgg atgttaggca ccatcgtttg gaggtctttg tgccggcaag gcgacgcttc
      121 caattggttc tggtcaagcc atcgcactat gacgacgatg gctacgtgat acgctggtgg
      181 cgcgcaatga ttccgtcgaa ttcgttggcc gctgtctacg ggattgcagc cgattgcgca
      241 gagcgtcagg ttctcgggca ggacgttgcg atcgacatcg aggcaattga cgagacgcat
      301 acgcgcgtta acgtggccga attgctcgag cggtttcgca gtcacggcag ttttgggctg
      361 ctcgcactcg ttggcgtcca gtcgaaccaa tatccgcgcg cgctagatat cgcccgcccg
      421 ttccgcgccg ccggcatccc ggttgcgatc ggaggatttc acgtgtccgg ctgtgtgtcg
      481 atgcttgacg gccgcgccgt cgaactcgat gcttgtcggg atatgggcgt ttcgatgttt
      541 gccggtgaag ccgaggggcg cctcgaactg gtattgcggg acgcggcagc cggatgcctt
      601 gcgccgctct atgatttcat gagagacctg ccggccctgg agggcacgcc ggtgccgttc
      661 cttcccaagc aatatgtcga gcggacgctt ggcttgagta cgagctttga cgccggccgc
      721 ggctgcccct atcagtgctc gttctgtaca attatcaatg tgcaagggcg caagtcgcgc
      781 ttccgcacgg ccgacgacgt cgagcacctg gtccgtctga actgggcgca gggcatcaac
      841 aaattcttca tcaccgacga taatttcgcg cgcaacaaag catgggagtc gatcttcgat
      901 cgtctgatcg cgcttcgtga gagggacgga atccgccttg gcctgatgat ccaggtcgac
      961 acactgtgcc acaagctccc aaatttcatc gagaaggcga agcgggcagg cgtcacccgc
     1021 gtgttcatcg gcctcgagaa cattaatccg gacaaccttg ccgccgccaa aaaacggcag
     1081 aacaggatca ctgaatatcg aagaatgctg ctggcttgga aagcacaggg tattctcacg
     1141 tttgctggat acatcctcgg cttcccgtcg gatacgccgg agaccatccg acgcgacatc
     1201 gcgatcattc aggaggaatt gccccttgat atcatcgagt tcttctgcct gacgccactg
     1261 ccgggttcgg aggatcatca ggttctctgg aaaaagggcg tcgcgatgga gcgagacctc
     1321 aacacgtacg acgttgagca cgtctgcacc gcgcatccgt gcatgagccg ggagcagtgg
     1381 gaagcgatct atcgcgaggc ttggtcactc tactacaccc caaagcacat ggagacgcta
     1441 ctccgtcgcg cggtcgcgac cggagtgccg gtcaacagtc ttattaaagt gctcgtcaat
     1501 tttgcgacca cagctctact tgaaaacgtg catccgctcc agggcggcat attccggctc
     1561 aagcatccct cggaacgtcg tccgggcctg tcgcgcgaac atgccttcat cttctggccg
     1621 cggtttgttt gggaaacgct cagcaaacat gccgtcatcg tcgcaacgat cgcgcgcctg
     1681 cttgtgctca agtttgtcat cacgcgcgat ctggccgctc gaacgtacaa ggacaccgcg
     1741 ctcacaccgg tcgctgagga cgaggaggtg acgctcaatc tgttcaccaa cacgaccggc
     1801 gcacgcgccg cagtcacgca tttgaagaag atcgaccggc tgactggaac cttccgctcg
     1861 acacaatgat gcgatctttc gggcctcggg cgtcgagaga gtggcgatct cgcggcaagt
     1921 cgtggggagg ggaccgctcc cccgcgctac atcttgccct tggtacgggc aacgccggtg
     1981 gggctgtccg gatcggctag tcctgcactg ccagaaacgc ttgcctaatc catccgttat
     2041 ccgcgcctat ggcttgctta acattccgcc gccaattggt ccgatcgtcc gtctcgccac
     2101 gctcagccct accgcaagca gaccagtagg cttgacacgc ctcgtagagt gcttcgctcc
     2161 gaggcgcggc cttgccccga caaagcttcc aagcctcaac gatcacagcc gcgcaaacgc
     2221 cctgtccggt gttcggtctt cttccgatct tgcgactggt gtgaggcagg tccgctttaa
     2281 tgagtggcaa cacatgacgt gcaatccaca cttcctccgg gcattgaacg ccacagccca
     2341 tgtgctcata gatcggaagc cattggatta gggtgtcgca agcttgttcc atttgctcca
     2401 acacctcaac aaacttcttg tgatcctctt tggtgaaatc gccccctgct acggcaagtg
     2461 agaaatgctc caagcccagg atcagccatt tgggcgtagg gcccttcgca atcattgcgg
     2521 cgacaggatc gaacgcaggg ttgtgattgc gaacaaattc aaccgtcgtt tccattagct
     2581 ttctttcatg actttagttt tcacaatccc cccgatcagc cccgcaagcc gctccaaggt
     2641 gtcccgcttc tcatcaagat atttgtaccg atcgcagatg cctcgcacgc cccgatgttg
     2701 tgcgcaaggc atcgctcggc gatatccggc aggaagcgct acggcattct cgcgtgacgt
     2761 tccgaaccat caagcaaaat cttttctggg ccttctttta caatatggtg gcgattccgc
     2821 tcgccgcctt cggccttctc tcccatgatc gcggcgggag caatggcgct ctcaagtgtc
     2881 agcgtcgctg gcgggctact ggctagcttg gggaggacag ttcgagaatt tcgcggctgc
     2941 ccgccaaagg ctcttgatcg tcgtgccgtt ctacttcgca ttgatattcc tgttgctgct
     3001 cgcggcgcta ggatcctggc gcgagcgctt ttggtcttac agcgccgtcc ctttcgcact
     3061 tacgggcggc gttgccgcgc tttggctgcg tgacatgacg ttttcgatct cggccgctgt
     3121 cgggttcatt gcattgtcgg gggtcgcggt gctcaatggc ctggtcatgc tgaccttcat
     3181 cccggcaact catccaagct ggagtcccga agcaggaggc tatctcgcac ggcgtcctga
     3241 cgcgactgcg cccagtggtt atgaccacac tcgtggactc cttgggattc gtccctatgg
     3301 ctatcgcgac cggttccgga gccgaggttc agaaagccgg tcgcaatcgt tgtcattggc
     3361 gggctaatca ccgcgacact gctgaccctt ctagtgcttc cggccctcta tagctgcttc
     3421 tccggagcac ccctcgctca cgccgaggaa gtgtcgggcc tgcgatggaa gaacggctga
     3481 agttcatcgc gcggcttctg ggagtctcag tcgctttcac ctattccaaa gcgcttcacg
     3541 gcgtcggcct ccgcactctg ccgtacagcc catttcaagt cggagggccg attgtgcttt
     3601 ttgagcaggt cgcgaaatgc ctcgtccgcc ataagacgtt gttttgatga cggcagccac
     3661 acagaccggt tgaacagctc gtaggactcg aactggcccg gataacgcat tgaatatacg
     3721 atcaaattct tttggcggtc ccgacaagac tcgaacttgt gaccttcggt ttaggaaacc
     3781 gctgctctat ccggctgagc tacgggacca agttgctgag atatatagac tttgcctact
     3841 ggttcaaatc ctatctggca tctccttggc atcaaatact tagtgccgtt agggaagaaa
     3901 ttgggatcag agcgccattg aaatcgctcg tttggggcac cagcgtggtc ttgagccagg
     3961 gagccccttg ccgcaggcga ttggatcgac gcttgccggc actctcgtcg ttgcgcggga
     4021 catatgccag cacatgagat gagatgtgcg tcggaaggga accggctcat gtcgatcccg
     4081 atctctgaga cgatgacgtg agcctcgggc ggtctcaaga cagatgcctt ctgccccact
     4141 gctccggttc tgctagggaa cttttatgtt cctcgtgcgt tgaagcttcg gctcggtaca
     4201 atccggacac cggcgggtgc catgcttggc ttgcttaaag tgattgccgc cgcggcgctg
     4261 gcgctcgtgc tgtggttgat gatatcggaa gccgtagtgc gacccgcagc gcagcaagag
     4321 ccgccgaggc cgccagagcc aataccgaag tcgacggcgc taacaacgac accgacgaca
     4381 ccagcgacac caaccgcgcc agcgacagcc gtcgacatcg ctaagctcaa cgacaccatc
     4441 atgaagctca tagcaggcgt cgacaggctt aatcagcaac ttggcgtccg cgatgcgcct
     4501 gcaaagccgg gccagagttc cgcggccacc gatcctccgc gcagacgaga aatcgatccg
     4561 aggcagacat ggaggcggca aagctggcgg gattcagcgt gctggcggtg aatagctgcc
     4621 agcggtcggc atatgcatga cagatcaagt cccgccttat gagcttgtgg ttcggctctg
     4681 tacgatccat tccagtcgct tccgttggga catccgacaa aacgggatgc cggtccagtc
     4741 ctccgcggat tcgttcgcga gcgagcagga agcccatcag gacgggcgcc gggagatgga
     4801 aaaactaatg caagtgtcgc ctcgcagcga ttagccgctt aggctccgcc gcgaattcct
     4861 tggcggcggc tccgatcgcc gcgttggctg accttggcac gggatgtttc ggctatcgct
     4921 caatgcgacc cgtaatgagc ttcttggctc gacctaatgg ccgttttctt cgtcctctaa
     4981 tcgccgccac taatgcaaga agttt
//
LOCUS       DATILV010000916         2322 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2784805, whole genome shotgun sequence.
ACCESSION   DATILV010000916 DATILV010000000
VERSION     DATILV010000916.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2322)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2322)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2322
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2784805"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..238
                     /locus_tag="VLJ17_22015"
     CDS             <1..238
                     /locus_tag="VLJ17_22015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HSV25687.1"
                     /translation="CDIPRDTIKPESHAINDLGIDSLDFLDIAFAIDKAFGIKLPLEQ
                     WTQEVNDGKATTEQYFVLDNLCARIDGLVAAKGG"
     gene            253..720
                     /locus_tag="VLJ17_22020"
     CDS             253..720
                     /locus_tag="VLJ17_22020"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ family
                     protein"
                     /protein_id="HSV25688.1"
                     /translation="MRLEYFQLIDRIDALDLEARTLKAHAQVPPTSTIFEGHFPGYPL
                     MPGVLLIESMAQASGWLIIALTKFERMPFLAAVKEAKLRTFVSPGQTLMLAASIVHEG
                     SGFAVTKAAIEVDGKAVADSEITFRVMAFPDPKFRAGMEQVAAAINFPATIRG"
     gene            754..1938
                     /locus_tag="VLJ17_22025"
     CDS             754..1938
                     /locus_tag="VLJ17_22025"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009797416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
                     /protein_id="HSV25689.1"
                     /translation="MKRETWITGIGILSCLGEGREAHWQALTDGKTRSDGAAYRPYIV
                     HPIPLMSFDAQIPKKGDQRQMEPWQRIGVYAAGLALDSAGVKGKADILGRMDMIVAAG
                     GGERDLAVDGAILSGLPKAGTNPAKQDRFLNERLMSDLRPTLFLAQLSNLLAGNISIV
                     HGVTGSSRTFMGEESAGVDAVRIALARIGAGQSDIALVGGAQNAERKEMLMLYEFGGF
                     ALKEAFHPVWDRATDPGFALGSMGAFLVLEASEHARARGAKPFARLVAVVNARSDRKP
                     GAVTATLAKLWETLPAIRRDSAVISGATGAAPGTAEERTFLDTRGEIAVRATGTHIGH
                     GVEPQFAMNIALAALAIERGALFPPHDPSERTTTGPLTQVVVTSVGHWRGEGLGLVEA
                     AG"
     gene            complement(2049..>2322)
                     /locus_tag="VLJ17_22030"
     CDS             complement(2049..>2322)
                     /locus_tag="VLJ17_22030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25690.1"
                     /translation="LAHELSHARQHDWLGPTYLPVHAVLLFLSMVMFSFRPVAKFSPW
                     HAYNPMERVLICVPVDVIVDPPPPQGALAESVLRAFGLADDSSELP"
BASE COUNT          464 a          728 c          729 g          401 t
ORIGIN      
        1 atgtgacatc ccgcgtgata cgatcaagcc ggagagccac gccatcaacg atctcggcat
       61 cgacagcctg gatttcctcg atatagcttt tgcgatcgac aaggcgttcg ggatcaagtt
      121 gccgctcgag caatggactc aggaagtcaa cgacggaaag gccaccaccg agcagtactt
      181 cgtgctcgac aatctgtgcg cccgcattga cggactagtc gcggcgaagg ggggctgacc
      241 gcccggcccg ccatgcggct tgagtatttt cagctgatcg accggatcga cgcgctcgat
      301 ctcgaagccc gcactctcaa ggcgcatgcc caagtcccgc cgacgagcac aattttcgag
      361 ggtcatttcc caggttaccc gctgatgccg ggcgtgctgc tgatcgaatc gatggcgcaa
      421 gcatccggtt ggctgatcat cgcgctgacc aaattcgagc ggatgccgtt cctggcggcc
      481 gtaaaggaag cgaaattgcg cactttcgtg tcgccaggac agaccttgat gctcgcggcg
      541 agcatcgtcc acgagggttc tggcttcgcc gtcaccaaag cggccataga ggtggacggc
      601 aaggcggtgg ctgacagtga gatcacattt cgggtgatgg catttccgga cccgaaattc
      661 cgcgccggca tggagcaggt ggccgccgcc atcaactttc cggcgaccat ccgtggctga
      721 gagcgtgaga cacagatcgg acctcaccca acgatgaaac gggaaacctg gatcaccggg
      781 attggcatcc tgtcgtgcct cggcgagggg cgagaagccc attggcaggc gctcactgac
      841 gggaagaccc gttccgacgg tgccgcctac cggccctaca tcgtacatcc gatccccctc
      901 atgagcttcg atgcccaaat ccccaagaag ggcgaccaac gccagatgga gccttggcag
      961 cgcatcggcg tctatgcggc cgggctggcc ctcgacagcg ccggcgtcaa gggcaaagcg
     1021 gacattctcg gccgcatgga catgatcgtc gcggctggtg gcggcgagcg cgaccttgcg
     1081 gtcgatggag cgatcttgtc cgggctgccc aaggccggca ccaatcctgc caagcaggac
     1141 cgtttcctca atgaacggct gatgagcgat ctacggccga ccttgttcct ggcgcaactc
     1201 tccaacctgc tggccggcaa catctccatc gtgcacgggg tcaccggatc gtcgcgcacc
     1261 ttcatgggcg aggagtccgc tggcgtcgat gctgtgcgca tcgcgctcgc ccgcatcggg
     1321 gccggccaga gcgatatcgc gcttgtgggc ggcgcgcaga acgccgagcg caaggagatg
     1381 ctgatgctct acgagttcgg cggcttcgcc ctcaaggaag cgtttcatcc ggtgtgggat
     1441 cgcgccaccg atccgggttt cgcgctcggc tcgatgggag cgttcctggt actcgaagca
     1501 agcgagcacg cgcgcgcacg cggggcgaaa ccctttgcgc gccttgttgc cgtggtcaat
     1561 gcgcgctcgg atcgcaaacc tggcgcagtc acggcgacgc tggcgaagct ttgggagact
     1621 ttgccggcca ttcgtcgcga cagtgcggtc atttcgggcg caaccggcgc tgcgcccggg
     1681 actgcagagg aacgcacctt cctggacacc cgcggcgaaa tcgcggtgcg cgccaccggc
     1741 acccacatcg gccatggtgt cgaaccgcaa ttcgccatga acatcgcact ggccgcactg
     1801 gcgatcgaac gcggggcctt gtttccgccg cacgatccgt cggagcgaac cacaaccggt
     1861 ccgctaaccc aggtcgttgt caccagcgtc gggcattggc gcggcgaagg tctggggcta
     1921 gtggaggcgg cggggtgagg cacagcgcga tagcgccatg cgcccccttc tccctccccg
     1981 tcttcggggc agatctcaaa ggagcaagac cccaacatag acgccacgac aaagcgtccg
     2041 acccggtctc agggtaactc tgagctgtca tccgccaggc caaatgcacg caagacactt
     2101 tcggcaagag cgccttgcgg cggtggcgga tctacaatga cgtcaaccgg cacgcaaatc
     2161 aggacgcgct ccatcggatt ataggcatgc catggtgaga acttggcgac gggacgaaag
     2221 gaaaacatca ccatgctaag aaacagcagc actgcgtgaa ccggtaaata tgttggacca
     2281 agccaatcgt gctgacgtgc atgtgagagt tcgtgagcca gg
//
LOCUS       DATILV010000917         5720 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4067904, whole genome shotgun sequence.
ACCESSION   DATILV010000917 DATILV010000000
VERSION     DATILV010000917.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5720)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5720)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5720
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4067904"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            350..1030
                     /locus_tag="VLJ17_22035"
     CDS             350..1030
                     /locus_tag="VLJ17_22035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV25691.1"
                     /translation="MIAKNALVLMIAAGILAGSAYQHATAREIGKSGPSRPYQIYLLK
                     GLADIFSSGMDFLQAKLRARGVVGEVHSHSEVESLAQSAIAKWRGGSHGPIIIIGHSL
                     GADAAITMAQRLGNAQVPVALLVTFSPMDSAAALANVARAVNYFQSNSLWHGKITPGA
                     GFHGVLENVDLAQATDITHFNIEKAEQLHVATVAKVLAIVGTHTKSAAQHVGPSAALP
                     AGASTTNQ"
     gene            1072..1839
                     /locus_tag="VLJ17_22040"
     CDS             1072..1839
                     /locus_tag="VLJ17_22040"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HSV25692.1"
                     /translation="MSRKSSRSPVGRGALGRECAASSAEPRLPLGEPPVRPTFARERA
                     AIKRGMFPVAGCDEAGRGPLAGPVVAAAVILDPNRIPRGLNDSKKLTAAEREKLYGRI
                     FATSEVGIAFGSPARIDRDNIRRASLWALARAVAALAVRPRLVFVDGIDRIEVGCDCV
                     AVVSGDALVLSIAAASIVAKVVRDRLMMQIGAAHPGYGFERHMGYAVPEHCRALVALG
                     PTVHHRRSFAPVAAAYEERGGNANSFADELAGDLLAQ"
     gene            1883..3403
                     /locus_tag="VLJ17_22045"
     CDS             1883..3403
                     /locus_tag="VLJ17_22045"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HSV25693.1"
                     /translation="MLHTSLIVELLRSQPRLMFWVATLAQTALWCVVPSLFYSSPPGE
                     LPLVLAIGHEFQLGSSFGPPLAFWTAEVAFDIAGAPGVYVLAQACIAIAYYGVFTLAR
                     AVVGIHHATFAILLMGGIFAFAAPTSDFGPAILALPFTVFAIVNLWRAVGERRRAGWF
                     LLALQLGLLLLTTYAGLILVFAIFVFLAATRRGRRALRSADPWLASTMIVAVLFPHLI
                     WLDLAADRFPLDFGVATRANGSYLGGFVDFVEVFMFSHTGLAVLVMLGSKWHFRSEEK
                     VPVFVRSFTDPFGRRFVYFFAVVPALIAALFAGLSGEPHTLGNLAPYVALSGLAIVVL
                     VGNSIPWYRPRLVAATWSLLLAAPALGVVVAIVVLPWLGVSGANVAQPAAAMGRFFAE
                     TFERRTGAPLAIVAGEPRTAALVALGAPTRPSLYLDATPERTPWIRADDIRRKGAVVV
                     WPNDDTRTQVPADMAMRFPGLVADVPRAFERTMQGRLPLSRIGWGVLRPQADAPNR"
     gene            complement(3478..4356)
                     /locus_tag="VLJ17_22050"
     CDS             complement(3478..4356)
                     /locus_tag="VLJ17_22050"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012042545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HSV25694.1"
                     /translation="MNIDRPDDVHALLAFYADAGVDAVLDEAPVNRFIAEAAQPRDPQ
                     VPVDDPPFSPPEAPARIRLPLDRPGHDAPNLRSRSPPASLNAPAAPDAAIMAARNAAR
                     EATGLDALRIMLERFEGCGLRLTAKRLVFADGNPQGKVMFVGEAPGREEDIAGLPFVG
                     RSGQLLDRMMAAIGLDRTSTYIANVIPWRPPGNRTPTPQESQICLPFIKRQIELADPD
                     VLVCLGGPSAAALLGITEGIRRSRGRWHVYHTGTREIRAIATFHPAYLLRTPLEKRFA
                     WRDFLAIRKELDSDNG"
     gene            4478..>5720
                     /locus_tag="VLJ17_22055"
     CDS             4478..>5720
                     /locus_tag="VLJ17_22055"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003497011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSV25695.1"
                     /translation="MTENMMEMPARESMEFDVVIVGAGPSGLAAAIRLKQLSPETSVV
                     VVEKGSEVGAHIMSGAVIDPSGLDALLPGWRGEDTPIKTAVADDRFYMLGAGGALRLP
                     NALMPPLLNNHGNFIVSLGNVCRWLATKAEAMGIEIYPGFAAAEVLFGERGEVVGIAT
                     GDMGIGRNGKHKDSFTRGMELRGKYTLFGEGARGHLSKVLISRFTLDRDREPPKFGIG
                     LKEVWQVAPECYRPGLVQHTFGWPLDDRTGGGSFLYHYDEQFVSIGFVVHLNYENPYL
                     SPFEEFQRFKTHPHVRDTFAGGKRISYGARAIAEGGWQSVPKLVFPGGALIGDGAGFL
                     NVPRLKGTHNAMQSGMLAAEHVVAALAAGRANDELADYETSWRTSAIGVDLWKARNAK
                     PLWSKLGTVLGIGCAAVDLWTN"
BASE COUNT          968 a         1713 c         1866 g         1173 t
ORIGIN      
        1 tgcctgcccg agcggaacgg tcacgctgac atagcggatt aataccgaca tcatcgcaaa
       61 cagcatcacc gagatgaact tgattgagat ggcgaggcga aatttcatgg gctggatgcg
      121 gccgcggcag gcaggcggaa aatcgacgct accgcgcaca tgcgagggcg gtccggcggt
      181 attggcaggg ggcgcgggtc gcggcggaag cgggtttgtc acaatccatc tatgacgtga
      241 gccgattgta ggcaaaaaaa ccgtgctgaa ccggaatccg ggcttcacaa aacatcccgg
      301 cgcgttagaa cgtcgcggct gcgaactcgc gggcaaaggg gttttggcga tgattgcaaa
      361 aaatgctttg gtgctgatga tagcggcggg cattttggcc ggatcagcct atcaacatgc
      421 caccgccagg gagattggga aaagcggtcc aagtcgaccc tatcagatct acctgctcaa
      481 gggccttgcc gacatattct caagcggaat ggacttcttg caggcgaagc tgcgagcccg
      541 cggggtcgtg ggcgaagtgc atagccactc tgaagtcgaa tcgcttgccc aatcggcgat
      601 cgcaaaatgg cgtggcggct cgcacggtcc gatcatcatc atcggacatt cgctcggagc
      661 ggatgctgcg atcacgatgg ctcagcgcct cggcaatgcg caagttccgg tcgcgctgtt
      721 ggtgaccttc tcgccgatgg attccgccgc ggccttggcc aatgtggcgc gagcagtcaa
      781 ttatttccaa tcaaacagcc tgtggcacgg gaagatcacc cccggtgccg ggtttcacgg
      841 cgtgctggaa aatgtcgatc tggctcaggc gacggatatc acgcatttca atatcgaaaa
      901 ggcggagcag ttgcacgtcg ccaccgtcgc caaggtgctt gcgatcgtcg ggacgcatac
      961 gaagtcggca gcccagcacg tcggcccgtc tgcggcgtta cccgccggtg cgtcgacgac
     1021 aaatcaataa agaacggctc tgcaaatgtt gtgggcgtcg atccttccgc catgagtcgc
     1081 aagtctagtc gctctcccgt tggacgtggc gctcttggcc gtgaatgcgc tgcctcgtcc
     1141 gctgagccgc ggctgccttt aggggagccc cctgtccggc cgacctttgc gcgcgagcgc
     1201 gccgcgatca agcgcggcat gtttccggtg gcgggttgcg atgaggccgg tcgcggtccg
     1261 ctggccggtc ccgtggtagc tgcagcagta attctcgacc ccaatcgtat cccgcgcggt
     1321 ctcaacgatt ccaagaagct cacggccgcg gaacgcgaga agctctatgg gcgcattttc
     1381 gcgacgtcgg aagtgggtat tgccttcggc tcgccggctc gtattgaccg cgacaatatc
     1441 cggcgcgcgt ctctgtgggc gctcgcccgt gcggttgcgg cgttggcggt tcggccgcgg
     1501 cttgtgttcg tcgatggcat cgatcgcatc gaagttggct gtgactgtgt ggcggtggtt
     1561 tccggcgatg cgctggtgct gtcgattgcg gcagcgtcga tcgtcgccaa ggtggtgcgc
     1621 gaccggctga tgatgcagat cggggccgcc catcctggct acggctttga gcggcacatg
     1681 ggatatgcgg tgccggagca ttgccgcgcg cttgtcgcgc taggccccac ggtgcatcat
     1741 cgccgcagtt tcgcaccggt cgcagccgcc tatgaggaac gcggtggaaa cgcgaacagt
     1801 tttgccgacg aacttgccgg cgatctgctt gctcagtgag ccaacgccca cttagtctgt
     1861 ttttcccaaa gatcggtcgc cgatgctcca cacttccctg atcgtcgaat tgctgcgctc
     1921 gcagccccgg ctgatgttct gggtggcgac gctcgcgcag acggcgttat ggtgtgtggt
     1981 accgtcgctg ttttattcgt cgccacctgg cgaactgccg ctggtgctcg cgatcggtca
     2041 tgaattccaa ctcggcagct cctttggccc gccgctcgcg ttctggacgg cggaagtcgc
     2101 gttcgatatc gctggtgcgc cgggcgtcta cgtgcttgct caggcttgca tcgcaatcgc
     2161 ctattacgga gtgtttacgc tcgcgcgcgc cgtcgttgga atacatcatg cgaccttcgc
     2221 gatcctgctg atgggcggca tttttgcttt tgcggcgccg acgtcggact ttggacccgc
     2281 catcttggca ttacccttca cggtcttcgc catcgtcaat ctgtggcgtg cggtcggcga
     2341 gcggcgacgc gcgggatggt tcctgctcgc gctgcaactt ggcctcttgc tgttgaccac
     2401 atatgccggc ctcatcctcg ttttcgcgat attcgttttc ctcgcggcga cgcggcgcgg
     2461 ccggcgggcg ctgcgatccg ctgatccgtg gcttgccagc accatgatcg tggccgtgct
     2521 gtttccgcat ctgatctggc tcgatctggc ggccgacaga tttccgctcg atttcggcgt
     2581 ggcgacccgc gcgaacggtt cttatctggg cggttttgtt gatttcgtcg aagtgttcat
     2641 gttcagccac acgggtctgg cggttctggt gatgctcggc agcaaatggc atttccgttc
     2701 cgaggagaaa gtgccggtct tcgtgcgcag cttcacggat ccgttcggac ggcgtttcgt
     2761 ctatttcttc gccgtcgtgc cggcgcttat cgcggcattg ttcgcaggtt tgtccggcga
     2821 gccacatacg ctcggaaatc tggcgcccta tgtggcattg tcgggcctcg ccattgtggt
     2881 gttggtcggt aattccatcc catggtatcg gccgcgcctc gtcgccgcga cgtggtcgct
     2941 gttgttggcg gcgccggcgc tcggtgtggt cgtcgccatc gtcgttctgc cgtggctcgg
     3001 agtttccggc gccaatgtgg cgcagcccgc cgccgcgatg ggccgcttct ttgcggagac
     3061 cttcgagcgc cgcaccgggg ccccgctcgc catcgtcgca ggagaaccgc gcactgccgc
     3121 gctcgttgcg ctcggtgcgc cgacgcggcc aagcctctat ctcgacgcaa cgcctgagcg
     3181 cacgccatgg attagggccg atgatatccg ccgcaaaggg gcggtcgtgg tgtggcctaa
     3241 tgacgacacc cgcacgcaag tgccggccga catggcgatg cgctttcccg gcctcgtcgc
     3301 ggacgtgccg cgcgcctttg agcggacgat gcaagggcgc ttgccgctgt cgcgcatcgg
     3361 gtggggggta ttgcgcccgc aggcggatgc gccgaacaga tgacagacat cagacgacgg
     3421 acgtcagatg tcagatcgtg gatgagcatc ggaggtgttc actttttctg acatccgtca
     3481 tccgttatcc gaatccagct ctttccgaat cgccagaaaa tcacgccacg cgaaccgctt
     3541 ttccagcggt gtgcgcagca aataggccgg gtggaaggtc gcaatggcgc gaatttcccg
     3601 tgtgcccgtg tgatagacgt gccagcgacc gcgcgacctg cggatgccct cagtgatgcc
     3661 gagtaatgcg gcagcagagg gacccccgag gcataccaga acgtcgggat cggcgagttc
     3721 gatctggcgc ttgataaagg gcaggcagat ctggctttcc tgcggcgttg gggtgcgatt
     3781 gccgggcgga cgccacggaa tgacattggc gatataggtg gaggtgcgat cgagtccgat
     3841 tgcggccatc atgcggtcga gcagctggcc cgagcgcccc acgaatggca gccccgcgat
     3901 gtcctcttcg cgacctgggg cttcgcccac gaacatcacc ttgccctgcg gatttccgtc
     3961 ggcgaacacg agccgcttcg cagtgaggcg cagcccacag ccctcgaatc gctccaacat
     4021 gatgcgcaac gcgtcgaggc cggtcgcttc tcgcgctgca ttccgtgcgg ccatgatggc
     4081 ggcatccggc gcagccggtg cgttgaggct ggcgggcggc gaacgcgacc gcaaatttgg
     4141 cgcgtcatgg ccggggcggt cgagcggcaa tcggattctc gcaggcgcct cgggcggcga
     4201 aaacggcggg tcgtccaccg gcacctgcgg atcacgcggc tgcgctgcct ctgcgataaa
     4261 tcggttgacc ggagcctcgt ctagtacagc atcaaccccc gcgtccgcat aaaaggcgag
     4321 aagggcatgc acgtcgtccg gccgatcgat gttcatgggc ggaaaattag cacatttccg
     4381 gcatggcagt tacatatcgg ttcatgtgca tgccgggtaa ctgtcgtgat tgcggcggtc
     4441 cagcaaacgt ggaaaaacgg cggtccgcac cgggacgatg acggagaata tgatggagat
     4501 gcccgcccgg gagtccatgg agttcgacgt ggtgatcgtg ggcgcagggc cctccgggct
     4561 tgcggccgcg atccggctga aacaactgtc gcccgaaact tccgtcgtgg tggtggaaaa
     4621 aggttccgag gtcggcgccc atatcatgtc cggtgcggtg atcgatccct ccgggctgga
     4681 tgcgctgcta ccgggctggc gcggtgagga cacgccgatc aagaccgcgg ttgccgacga
     4741 ccgcttctac atgttgggag caggcggtgc gctgcgactt cccaacgcgc tgatgccgcc
     4801 gctgctgaac aaccacggca atttcatcgt ttcgctcggc aatgtgtgcc gttggctcgc
     4861 caccaaggcg gaagccatgg gcatcgaaat ctatccgggc tttgccgcgg cggaggtact
     4921 gttcggtgag cgaggtgagg ttgtcggcat cgcgaccggc gacatgggca tcggccgtaa
     4981 cggcaaacac aaggattcgt ttacccgcgg catggaactg cgcggcaaat acaccttatt
     5041 tggcgagggg gctcgtgggc atctgagcaa ggtgttgatc tcgcgtttta cactcgatcg
     5101 cgaccgcgaa ccacccaaat tcggcatcgg ccttaaggag gtgtggcagg tcgcgccgga
     5161 atgctaccgt cccggcttgg tccagcacac cttcggctgg ccgctcgatg accgcaccgg
     5221 cggtggctcg ttcctctatc attatgatga gcagttcgta tcgatcggct tcgtggttca
     5281 cctgaactac gagaacccct atttgtcgcc gttcgaggaa ttccaacgct tcaagaccca
     5341 tccgcatgtg cgtgacacat tcgcgggcgg caagcgcatc agctatggag cccgagcaat
     5401 cgcggagggc ggctggcagt cagtgcctaa gctggtattt ccgggcggtg cgctgatcgg
     5461 cgatggcgcc gggtttctta acgtgccgcg cctcaaggga acccacaatg ccatgcagtc
     5521 cggcatgctg gccgccgaac atgtggtggc ggcgctggcg gccggccgcg ccaatgatga
     5581 actggcggat tacgagacct cctggcgcac ctcggccatc ggcgtcgacc tgtggaaagc
     5641 gcgaaacgcc aagccactat ggtcgaagct cggcacggta ttggggatcg gctgcgccgc
     5701 cgtcgacctg tggacaaaca
//
LOCUS       DATILV010000918        11737 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4568257, whole genome shotgun sequence.
ACCESSION   DATILV010000918 DATILV010000000
VERSION     DATILV010000918.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 11737)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11737)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11737
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4568257"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..403)
                     /locus_tag="VLJ17_22060"
     CDS             complement(<1..403)
                     /locus_tag="VLJ17_22060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018480932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF899 family protein"
                     /protein_id="HSV25696.1"
                     /translation="MDRNKARDIKRQGHLGTNRPPIVSPEAWEAARQQMLVKEKALMR
                     ARDALAAERRRMSWMAVEKAYEFEGPQGKVSLLDLFEGRRQLIVYRAFSEPGVFGWPE
                     HACRGCSLRADQVAHLAHLNARDTTLAYASRA"
     gene            748..1016
                     /locus_tag="VLJ17_22065"
                     /pseudo
     CDS             748..1016
                     /locus_tag="VLJ17_22065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087397.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus and C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(1771..2685)
                     /locus_tag="VLJ17_22070"
     CDS             complement(1771..2685)
                     /locus_tag="VLJ17_22070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV25697.1"
                     /translation="MLVQPSSRFITAPDGLKLHVRDYRVRDHGNKRARRLPMVCLPGL
                     SRTTEDFGVLATAIAANVTAPRRVLALDYRGRGLSDYDRNPKNYAIPVELGDVTGVLV
                     ACGAAPAIIVGTSRGGLIAMALAVKQPGAIAGVVLNDIGPVIDAQGLTRIKSYIGKLP
                     EPHSFQEGADILRRISEDQFPKLDAADWLTAAKRGWREHQGRLVPTYDPALAHNLAAI
                     NPNQPVPTMWPQFEALAQMPVRVIRGANSDILSAQTVEAMKARHPEMDVLVVPDQGHA
                     PLLAEPPVIARIAQFAATCDAAHAEAVA"
     gene            complement(2817..4991)
                     /locus_tag="VLJ17_22075"
     CDS             complement(2817..4991)
                     /locus_tag="VLJ17_22075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HSV25698.1"
                     /translation="MARQGAHNRTAACALASLVMLSSGAIAAQPLKYVPLPRPRPHIA
                     VAHPSTTTGAALPKAEFHTASLAPAASVALKNEPALPFSSTTSVSKPDLAAVKQAIDL
                     ARRGKSQDATDVQHRIQDPLARKLVEWAILRSDDNDADFSRYRNFIAANPSWPSLTMF
                     RKRGEAMLWQERADLTTIRAFTGNKPISGKGRFALGRALLAQGDRAGAQAAIRDAWRT
                     EPLTREAEEQVLEAFGDLITRADDKARMNSKLYAKENEAGMRAAQRLGGAEPAIAKAR
                     VAFNEKADNAKALFDALPDSAQQDPLVMLNRIQVLRRTDKIAEAAALIMAASRDAAQI
                     HDVDEWWVERRLVARKVLDTGDAGAAYQIVRDAAPPSKENYRVDREFTAGWIALRFLN
                     DPALAAQHFAHIGPGITNPITLARAGYWRGRAAEAMGRHQEARSHYEQAARHSTAYYG
                     QLARAKLGLSEIALAAPPLPSAEKRAGLTRIEVVRAAEILYAIGERDLVIPIVADLAE
                     RTQDMSTLAALAELATHHGDARSVLLVGKAALGRGYAFDHYAFPTFGLPRYSPIAPEV
                     ETAVIYAIARQESSFNPRDVSSANALGLMQVTPEAGRYIAKKFNVHYDQKRLLQDDVY
                     NMQIGAAELYDDISGYRGSYILAFAGYNAGRGRVKEWVERYGDPREPNVDPVDWVERI
                     PFSETRNYVQRILENVQVYRARFGGGNRLLIEADLRRGAAAN"
     gene            5211..6101
                     /gene="dapA"
                     /locus_tag="VLJ17_22080"
     CDS             5211..6101
                     /gene="dapA"
                     /locus_tag="VLJ17_22080"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013913182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HSV25699.1"
                     /translation="MGTTTTFRGSFTALVTPFQNGSVDEKAFRALVVWQIAEGTNGLV
                     PVGTTGESPTLSHDEHKNVVEWCVAEARGRVPVIAGAGSNSTGEAVELARHAEKAGAD
                     AVLVVTPYYNKPTQDGLYQHFKAINDAISIPIIIYNIPGRSVIDMSVDTMKRLYELKN
                     IAGVKDATSNMVRVSQQREVLGPEFNQLSGDDSTALGFMAHGGHGSISVTSNVAPRLC
                     AEFQGACLRGDYGTALKLQDKLMPLHQSLFIEASPAPTKYALSVLGKCAETARLPIVT
                     LSDKSRTAVRDAMVHAGLIN"
     gene            6211..6624
                     /gene="mscL"
                     /locus_tag="VLJ17_22085"
     CDS             6211..6624
                     /gene="mscL"
                     /locus_tag="VLJ17_22085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="large conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HSV25700.1"
                     /translation="MLEDFKKFALRGNVVDLAVGVIIGVAFGAIVNSLVGDIIMPIIG
                     AITGGLDFSNYFTALSSKVNATALADAKKQGAVLAWGNFLTIVINFLIIAFVLFLAIR
                     GLERLQKTEAAKPAEPPKPSREVELLTEIRDLLKK"
     gene            6680..7372
                     /locus_tag="VLJ17_22090"
     CDS             6680..7372
                     /locus_tag="VLJ17_22090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25701.1"
                     /translation="MTKPPFIWIAALLLGALAVAGAALSAFSPERIALSGAQLQERIN
                     HELPRQFHRVMVERATVNIADGRISLRIEARTTALVPAIAVVAFARGVPRYNADRGEV
                     FFDAEDVRLEDFGSLGLAERLGVRLDGRFGGHVEQVLPHLGTAAANLMAIAVKAYLAA
                     RPVYRFKDDIKGLVLKTTIKDIAIVGDTLVISGSLIKLTFAVAAWLFGLALVVLVAGW
                     LWRTREGARHAS"
     gene            complement(7577..8092)
                     /locus_tag="VLJ17_22095"
     CDS             complement(7577..8092)
                     /locus_tag="VLJ17_22095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25702.1"
                     /translation="MRLDVGLRFWNYAAFAALVVTGVIWLVADQLKTSEHGEMWQAIA
                     ANMLMFHGITAMIALILLGAMIPLHVQRSWRRGKNRFTGSVMVATNAILVVTASGLYY
                     TGSDLLRTFVADVHIAAGLALPALIVTHIVLGRRATAPTLEACPNKVDAAARFPLTGI
                     AQARSDLSPTG"
     gene            complement(8082..9014)
                     /locus_tag="VLJ17_22100"
     CDS             complement(8082..9014)
                     /locus_tag="VLJ17_22100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015664729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0017013 - protein flavinylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HSV25703.1"
                     /translation="MTGTHASLRRARPQLGTFVEIVASGATIPEMEAAVEAAFAAVAT
                     VHRLMSFHEAASDVSRLNRGAASGAVPVHDWTYQVLETALDLHCRSAGTFDIAVAPAL
                     QEMGLLPSAPLPPSPRKSRGRVQKAHGPRGVIELLPKNHVRFADPGVKIDLGGIAKGF
                     AVDRAVETLCRHGVPNGLVNAGGDVAAFGPRRQLVDVRDPRHPDRTMCRVVLTNSALA
                     SSAGRFDPLRSDRPSGSAIVDPRTGQPSLSICGTTVRAPSCMIADALTKVVMNAGEGT
                     ASLLEHYGASALFVTAQGRLHATTDWKDEVRFAA"
     gene            complement(9186..9656)
                     /locus_tag="VLJ17_22105"
     CDS             complement(9186..9656)
                     /locus_tag="VLJ17_22105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008962936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding protein"
                     /protein_id="HSV25704.1"
                     /translation="MTNWIALTLPTAVIASIASPCHAVQYLTVDAAQKLAFPAANRFV
                     ENGGLTWKAQAGDKLLGLFVVDHVIGKHLYIDYAVALDPTGRVTRVEILQYRESYGGE
                     VREPGWLAQFVGKTSASRLKVGDDIRNISGATLSSAHVTEGVKRILATYGGRAR"
     gene            complement(9738..11456)
                     /locus_tag="VLJ17_22110"
     CDS             complement(9738..11456)
                     /locus_tag="VLJ17_22110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015664745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25705.1"
                     /translation="MLCHRRCVSVLAPGPNDRAASAAECHAVPLAALRWRILVMLTAT
                     ALSVGPTSAQDRGKEQDKTNAAPSGDVALLKKLEQMEQRIRVLEGQLKQKDTRAIEGA
                     YGQAPAPTLPPAGGKPAKDRKDAETPNQSKQPKDQKEAVGAAKPDWATPTPRDLTGRT
                     APINRPNSILGLTDSPVAGMSIGAYGEMQFGLQQNPAANGQWQNGFDAHRLVLLPTYL
                     ITPNIIFNAEIEFEHAGAGFDSDDKLHGTAEIEQVWVDFKMIDQFNWRAPGIDLIPIG
                     YINEHHEPTMFYSVKRPELYNGLIPSTWKAPATSVYGRLTDGLTYTLQASSSLEDFGD
                     DFTTRTDANTVPPFPAGYAAGINGLDALALARPVRGDFGQLSNDIAVAGQLNYSPPLV
                     PGFNGSVSAYYTPNTTPRGAYADTGMPLGRSSLTMFDAEFRYRVPNTGFEARGEYVFA
                     SFGDPANLRANNDSDPANNVGKTMYGYSGELAYHLPLGNIMSSDWEMVPFYRYTFQNT
                     QTGGFAGIDANLPTGAGQTQFHDVGIAVFPSPQVVLKATWQKVINRDPAGARSDSVLG
                     GVGFFF"
BASE COUNT         2199 a         3493 c         3770 g         2275 t
ORIGIN      
        1 gcgcccgcga ggcgtaggca agcgtggtgt cgcgagcgtt cagatgggcc aggtgggcga
       61 cctgatcggc gcgcaaggag cagccgcggc acgcgtgctc gggccagcca aacaccccgg
      121 gctcggagaa ggcgcgatag acgatcagct gacggcggcc ctcgaacagg tcgagcagac
      181 tgaccttgcc ctggggcccc tcgaattcgt acgccttctc gacggccatc cacgacatcc
      241 gccggcgttc ggcggcgagg gcgtcgcggg cccgcatcag ggccttttcc ttcacgagca
      301 tctgctggcg cgcagcttcc caggcctccg gggacacgat cggaggtctg ttcgttccaa
      361 gatgtccttg gcgcttgatg tctctcgctt tgttcctgtc catgtgtctc tcctgttcct
      421 attcgttctt gctctcggct acgaggcgca atttaagaac acgggtgtcc ctgggtgctg
      481 tcgcatcact gccttgcgct cgtgagacaa gctaatcgct tggatcgagc gacgagagtt
      541 acaagtgtgt cgggatttcg atggcccctc aaaatgtcgg tccgggtaac caaaagggtt
      601 tctctatgag ataagcttgg ggaatggcga cagctcgtcc ttaagctttc aacaaccggc
      661 gaggggcgct ccacagatgt ccgctaatgg tctgcaccgt gctgctgccc caccagcagt
      721 gatgctttga tgagtgagtg tcaaacgcgc atgatgtgca tcatcgaggg cctgcccggc
      781 gacagacgcc ggctcgacga acgcatcgaa ggcttatcgt cgacatcacg agcttggtgt
      841 agaaaggctc ggcatgcgag catctgatga cggtgccggg atcgggccga ccatttcgag
      901 tggcgaagtg ttctccaagg atcgcgactt ttccgcttgg ctcggactgg tgccgcggcg
      961 gatatcgacc ggagaccgca ccatcctcgg caaagatatc caagcgcggc aatcgttagc
     1021 tgcgcgtttt gttcgaggtg gggatcacgc cgatgatcgg ggtggacatg tcaataccga
     1081 ggtgttccag ctcttggacg ctcagctgtc cttcgcgcaa tcggctgccg acatcgcgtg
     1141 cctttcgatg tggtcggtcg gccgtgacaa tggaacctgt gcgtgagccg gatcgcatcc
     1201 gcgacctgca gcggcgttgc tcagtaccct ttcgggggcc gtcggcttta aatgccaacg
     1261 aggggcgcgc caaaaaggca tcgcccctcg cgtggataag ctccggctga gcaatccaaa
     1321 ttccgcttgc acgcaacgct tacgctacaa cacccagccc ggtaaacccg gtacgccacg
     1381 ccgcaatatc ctacgccaca ataccgatcc ttacgcccac acgcgaacga ggtacgctac
     1441 ctactccatc gcgacgcaaa ccgcagcggc gccgcgattc gacccgcgtg tgatcacaaa
     1501 ttcgttggga ataagtgcga cgacaatgag aaatattaag gctttattgg acacataagg
     1561 gcgataatgg gatgtaagtg tgacaaatgt aacagtctcg tgaatctgtg gccctctggg
     1621 acagtgaatc attctaccct gaggtgaatc attctccaaa atgatggggc tggcgaaaaa
     1681 actacttacg cctgaatatg gccaatcatt gttggcatcg tcggaatgag gggtgcgcaa
     1741 agaagctggt agcgcatcac ggccaagccc ctatgccacc gcctcggcat gagcggcgtc
     1801 gcatgtcgct gcgaattgcg cgatccgggc gatcacgggg ggctcggcga gcagcggtgc
     1861 atggccctga tcggggacca caagcacatc catttcgggg tgacgggcct tcatcgcctc
     1921 gaccgtctgg gcgctcagga tgtcggaatt ggcgccgcga atgaccctga ccggcatctg
     1981 ggccagggcc tcgaattgcg gccacatggt cgggaccggc tggttcgggt tgatggccgc
     2041 cagattgtgg gccaatgccg gatcgtaggt cgggacaagc cgaccttggt gttcacgcca
     2101 accacgtttc gccgccgtta gccaatccgc ggcatcgagt ttgggaaatt ggtcttccga
     2161 aatgcggcgc aaaatgtcgg cgccttcctg aaagctgtgc ggctccggca gcttgccgat
     2221 atagcttttg atgcgcgtca acccctgcgc gtcgatgacc ggaccgatgt cattgaggac
     2281 aacaccggcg atggcgcctg gctgttttac tgctagcgcc atcgcaatga ggccaccgcg
     2341 cgacgttccc acgatgatgg caggcgccgc gccgcaagcc acgagcactc cggtcacgtc
     2401 gcctaattcc accgggattg cgtaattctt cggattgcgg tcgtagtccg ataatccgcg
     2461 gccgcgatag tcaagtgcta gcacgcggcg tggcgcggta acgttggccg cgattgcggt
     2521 ggcgagcacg ccaaaatcct cggtcgtgcg cgacagccct ggcaggcaca ccatcggcaa
     2581 gcgccgcgcg cgcttgttgc catggtcgcg cacacgataa tcgcgcacat ggagcttgag
     2641 cccgtcgggg gccgtgatga accggctgct tggctgaacg agcatctgca cagagtctgc
     2701 tggcctttgg agcgagctag atccctccaa gttttccggg agggggctgt tccagggcat
     2761 tacgcttgtc gaagccaccc ctcgccgaag acggggagcg agacgagaag ctgccatcaa
     2821 ttcgcggcag caccgcggcg gagatccgct tcgatcaaaa gacggttccc gccgccgaac
     2881 cgtgcccggt agacctgcac attctcgagg atacgctgga cgtagttgcg ggtctccgag
     2941 aatggaatgc gctcgaccca gtcgaccggg tcgacatttg gctcgcgggg atcaccgtag
     3001 cgctcgaccc attccttcac gcgcccgcga cccgcattgt agcccgcgaa ggccaggatg
     3061 tacgagccgc ggtagccgga aatatcgtcg taaagctccg cggcgccgat ctgcatattg
     3121 tagacgtcgt cctgcagcag gcgtttctgg tcatagtgga cattgaattt cttggcgatg
     3181 tagcggccgg cctcgggcgt tacctgcatc aggccgaggg cgttggcgct tgagacgtca
     3241 cgcggattga aagagctttc ctggcgggcg atggcataga tcacggccgt ttcgacttca
     3301 ggtgcgatcg gcgagtagcg cggcagcccg aatgtcggaa aggcgtaatg gtcgaaggcg
     3361 tagccgcgcc ccaacgcggc ctttccgacc agcaacaccg aacgcgcatc gccatggtgg
     3421 gtggccaact cggcgagtgc cgccaacgtg ctcatgtcct gcgtgcgctc agcaagatcg
     3481 gccacgatcg gaatgacgag atcgcgctcg ccgatggcat agagaatctc cgccgcacgc
     3541 accacttcga tgcgcgtcag ccccgcacgt ttctcagcag acggcaacgg cggcgccgca
     3601 agtgcgatct cggaaagacc gagcttggcg cgcgcgagct gtccataata ggcggtgctg
     3661 tgacgcgccg cttgttcgta atggctgcgc gcctcctggt gacgtcccat cgcctcggcg
     3721 gcacgtccgc gccagtagcc ggcgcgcgca agcgtgatcg gattggtgat gcctgggccg
     3781 atatgagcaa aatgctgggc cgcgagtgcg gggtcgttga ggaatcgtag cgcgatccag
     3841 ccggcggtga actcgcggtc gacccggtag ttttccttgc tgggcggggc ggcatcgcgg
     3901 acaatctggt aggcggcccc ggcgtcgccg gtgtcgagca ccttgcgggc aaccaggcga
     3961 cgctcgaccc accattcgtc cacatcgtgg atctgggcgg catcacgcga cgccgccatt
     4021 atcagcgcag cggcttcggc gatcttgtcg gtgcgacgca gcacctgaat gcggttcagc
     4081 atcaccaggg gatcctgctg tgcactgtct ggcagagcat cgaacagagc cttggcattg
     4141 tcggccttct cgttgaacgc aacccgcgcc ttggcgatgg cgggctcagc gccgccaagc
     4201 cgctgcgcgg cgcgcatgcc ggcctcattc tctttggcgt agagcttgct gttcatccgc
     4261 gccttgtcgt cggcgcgggt aatgagatca ccaaaggctt caagtacctg ctcttcggcc
     4321 tcccgagtca gcggttcggt gcgccaagcg tcgcgaatgg cggcctgggc gccggcgcgg
     4381 tcgccctggg cgaggagcgc gcggccaagc gcgaagcgcc ccttaccgga aatgggcttg
     4441 ttacctgtga aggcgcggat ggtcgtcaga tccgcgcgtt cctgccacag catggcctcg
     4501 ccacgcttgc ggaacatggt caggcttggc cagcttgggt tggctgcgat gaagttacga
     4561 tatcgagaaa aatcggcgtc gttgtcgtcg cttcgcagga tcgcccattc gaccagcttg
     4621 cgggcgaggg gatcttgaat gcggtgctgc acatcggtcg cgtcctgcga cttgccgcgc
     4681 cgggcgagat cgatcgcctg tttcaccgcg gcgagatcag gtttcgagac cgaggtggtc
     4741 gacgagaatg ggagtgccgg ttcatttttc agcgcgacgg acgccgcggg agcgagggag
     4801 gcggtgtgaa attccgcctt cggtaaggcg gcgcctgtcg tggtgctcgg gtgggcaacc
     4861 gcgatatgcg ggcgcggtcg cggcagcggg acgtacttta acggctgcgc cgctatggcg
     4921 cccgacgaca gcatcaccaa gctggcgagc gcacaggccg ccgttctgtt gtgagcacct
     4981 tgccgggcca attatccccc cgtccccgat cgaatcaccg aggtgcgtct acactaacga
     5041 ttggattgct taaagaaccc ctaagcctcc aatcatggca atggtgcgcc ttaatgcggc
     5101 tattcttggg cgagcatatg gtgcgcctgg agggctttaa tccggctgct gaaatcgtta
     5161 tcaatgcgcc cggacgcact ccgcgccaat cccgcctcca ggagcgcacg atgggtacga
     5221 caacgacctt tcgcggatca ttcaccgcat tagtgacccc gttccagaat ggatcagtgg
     5281 acgagaaagc gtttcgcgcg ctggtggtct ggcaaatcgc cgaaggcacc aacggtctgg
     5341 ttccggtcgg gacgaccggg gaaagcccga cgctttccca cgacgagcat aagaacgttg
     5401 tcgagtggtg cgttgcggaa gcacgtggac gggtgccggt catcgccggt gcggggtcga
     5461 attcgaccgg cgaggcggtc gaattggcgc gccacgccga aaaggccgga gccgacgcgg
     5521 tgctggtggt caccccttat tacaataagc cgacccagga cgggctttac cagcatttca
     5581 aggcgatcaa cgacgccatc agcatcccga tcataatata caacattcct ggacggtcgg
     5641 tgatcgacat gtcggtcgac accatgaagc ggctttatga gcttaagaac atcgccggcg
     5701 tcaaggacgc cacgtccaac atggtgcggg tgtcgcagca gcgagaggta ctcggtcccg
     5761 agttcaacca gctgtccgga gatgactcaa ctgcgctcgg cttcatggcc catggcggcc
     5821 acggtagcat ctcggtgacc tcgaatgtcg cgccgcgcct gtgcgcggag ttccagggcg
     5881 cctgcctgcg cggggattac gggaccgctt taaagttgca ggacaagttg atgccgctgc
     5941 atcaaagcct gttcatcgag gccagtccgg cccccaccaa atacgcccta tcggtgctcg
     6001 gcaagtgcgc tgagacagca cgactgccga tcgtcacttt gtccgacaaa tcgaggacgg
     6061 cggtgcgcga tgccatggtg catgcggggc tgatcaatta gattttcgta agctcttcgg
     6121 tggtgcccag tggcaccacc gaagaggact tctcgcgcgg acgcgtgcgt ccattatgcg
     6181 gggctagttt actttgacgg gggacggctc atgctcgaag acttcaagaa attcgccctg
     6241 cgcggcaatg tcgtcgatct ggccgtcggt gtcatcatcg gggtggcgtt cggcgctatc
     6301 gtgaattcgc tggtcggcga catcatcatg ccgatcatcg gggcgatcac cggcggcctc
     6361 gacttctcga actatttcac tgcgttgtcg tctaaggtca acgccaccgc gttagcggat
     6421 gcaaagaagc aaggggccgt cctggcttgg ggcaatttcc ttacaatcgt tatcaatttc
     6481 ctgattattg ccttcgtgct gttcctggcg atccgcgggc tggagcggtt gcaaaagacg
     6541 gaagccgcca agcccgccga gccgccaaag ccgtcgcgcg aggtggagtt gctcacggag
     6601 atacgtgatc ttttgaaaaa atgacggacg gcatcaacgg aaccagaatg ccacaggtga
     6661 gcatcactga cgacacggcg tgacgaaacc cccgttcata tggattgccg ccctcctgct
     6721 cggcgcactt gcggttgctg gcgctgcgct aagcgcattc agccctgagc ggatcgcgct
     6781 gagcggagcg cagttgcagg agcggatcaa tcatgaactc ccccggcaat tccatcgcgt
     6841 catggtagaa cgcgcaaccg tcaacattgc ggatggccgc atttcactcc ggatcgaggc
     6901 gcgcaccacg gctctcgtcc cagcgattgc ggtggtcgcc ttcgcgcgcg gcgtgccgcg
     6961 gtacaatgcg gaccgcggcg aagtcttctt cgacgccgag gatgtgcggc ttgaagactt
     7021 tgggagctta ggcttggcgg agcggcttgg cgtgcgcctc gacgggcgct ttggcggcca
     7081 cgtcgagcag gtgctgccgc accttgggac ggctgccgcc aacctcatgg cgatcgctgt
     7141 caaagcctat ctggcggcgc gtccggtgta tcgcttcaaa gatgatatta agggcttggt
     7201 gctgaagacc acaatcaagg atatcgcgat cgttggcgat accttggtga tcagcggatc
     7261 gcttataaag ctgaccttcg cggtcgcggc ttggctattc gggctggcgc tggtggtgct
     7321 cgttgctggc tggctttggc gcacgcgtga aggggcgagg catgccagtt agagcgcgca
     7381 ccaatgagat cgaattatct ctcgttcatg cccgcgcaaa gacaccccgc cgcgtcacgc
     7441 ggcagggacc ccgtcttcgc gggcatgaac gtctttcgtg cggcggttga gcaagtaaga
     7501 cgctagatgc cccgggatta gcctcgaacc gcgctctaga agcgcgtgca tctggatcgt
     7561 agatgtcacg gctctatcac ccagttgggg agaggtcgga tcgcgcttgc gcgatccccg
     7621 tgagggggaa ccgagccgcc gcgtcaacct tattgggaca cgcttctaag gtgggcgctg
     7681 tggcgcggcg gcccagcacg atatgggtga cgatgagtgc cggcaacgca agcccggccg
     7741 caatatgcac atcggccacg aaggtgcgca gcaggtccga gcccgtatag taaagtcccg
     7801 acgcggtgac cacgagaatc gcgttggtcg ccaccatgac ggagccggtg aaccggtttt
     7861 ttccgcggcg ccacgagcgt tggacgtgca ggggtatcat ggcgcccagc aatatgaggg
     7921 cgatcatggc ggtgatgcca tggaacatca gcatgttggc ggcgatggcc tgccacatct
     7981 cgccgtgttc ggacgttttg agttggtcgg ccacgagcca aatcacgccg gtgacaacca
     8041 gcgccgcgaa ggccgcgtag ttccagaagc gaaggccgac atcaagccgc aaagcgcacc
     8101 tcgtccttcc aatcggtggt cgcgtgaagg cggccctgtg cggtcacgaa cagggcgctc
     8161 gcaccgtaat gttcgaggag cgaagccgtg ccttcgccgg cattcatcac caccttggtc
     8221 aatgcgtccg cgatcatgca actgggagcg cggacggtgg tgccgcagat cgaaagcgat
     8281 ggctgcccgg tgcgcggatc gacgatcgcg gagccggagg gtcgatcgga ccgcagcggg
     8341 tcgaaccgcc cggcactaga agcgagcgcg gagttagtca acacgacgcg gcacatcgtc
     8401 cgatcgggat ggcgtggatc acggacatcg accagctggc gccgcggacc aaacgccgcc
     8461 acgtcgccgc cggcattaac gagaccgttg gggacaccgt gacgacacaa agtctcgacg
     8521 gcacggtcga cagcaaagcc cttggcgatg ccaccgagat cgattttcac gccagggtcc
     8581 gcaaagcgga cgtgattttt ggggaggagc tcgatgaccc cgcgcggtcc gtgagctttc
     8641 tgcaccctcc ctcgactctt gcggggagag ggaggcagag gcgcgctcgg cagcaagccc
     8701 atttcctgaa gcgctggggc aaccgcgatg tcgaaggtcc cggccgaccg acagtgcaga
     8761 tcgagcgcgg tttcgagcac ctgataggtc caatcatgga ccgggacggc gcctgatgcg
     8821 gcgccgcggt tgagccggct cacatcgctt gcggcctcgt gaaaactcat cagccggtgc
     8881 accgtggcga cggcggcgaa cgccgcctcg acggcagctt ccatctcagg aatcgtcgct
     8941 cccgaggcca cgatctctac aaatgtgccg agctgcggcc gcgcgcggcg gaggctagcg
     9001 tgcgttccgg tcatgtcgaa ccattccccc tagtcatggc cgggcttgcc aggttttctc
     9061 gccgaaggcc cgcaagaaag ccgtggatgc ccgcgaagac ggggtccccg ccgcgtgaag
     9121 cggcgggatg tctttgcgcg ggcatgattg cggcagagat gattcgattt cattggaacg
     9181 cgctcctagc gtgcacggcc cccataggtc gccaatatcc gttttacgcc ttcggtgacg
     9241 tgggccgacg acaacgtcgc gccggaaata ttcctgatat cgtcaccgac cttgagacgg
     9301 ctggcgctcg tcttaccgac gaattgcgcg agccagccgg gctcacgcac ctctccgccg
     9361 taggactcgc ggtattgcag gatttcgact cgcgtcaccc gccccgtcgg gtcgagcgcc
     9421 accgcgtagt cgatatagag gtgcttgccg ataacgtgat cgaccacgaa caggccgagc
     9481 agcttgtcgc ccgcctgcgc tttccaggtc agtccgccat tctcgacaaa acgatttgcc
     9541 gccggaaagg cgagcttttg tgcggcgtcg accgtgagat actggaccgc gtggcagggc
     9601 gatgcgatcg acgcgatcac cgcggtcggc agggtcaagg caatccaatt ggtcatgtgg
     9661 cttcctgttt ctcttaagac cgcgcgcgtc tcgcgtgccc caacgaagta gccggcgaga
     9721 cgcctgcggt ccgacgatta gaaaaagaat cccacgccgc cgagtaccga gtccgatcgc
     9781 gcgcctgccg gatcgcgatt gatcaccttc tgccaagttg ccttcaagac gacctggggc
     9841 gaagggaaga ccgcgatgcc gacatcgtgg aactgtgtct gcccggcgcc agtcggcagg
     9901 ttggcgtcaa tgccggcgaa gccgcccgtc tgcgtgttct ggaacgtgta gcgatagaat
     9961 ggcaccatct cccagtcgct cgacatgata ttgcccaggg gcaagtgata ggcgagctcg
    10021 cccgaatagc cgtacatcgt cttgcccaca ttgttggcgg gatcggagtc gttgttggcg
    10081 cgcaggttgg cgggatcgcc gaagctggcg aagacatatt cgccgcgcgc ctcaaaaccc
    10141 gtgtttggca cccggtagcg gaattcggcg tcgaacatgg tgaggcttga gcggccgagc
    10201 ggcatgccgg tatccgcata ggcgccgcgc ggcgtggtgt tgggggtgta gtaggcactg
    10261 acgctgccgt taaagccggg taccagcggt ggcgaatagt tcaactgacc tgccaccgcg
    10321 atgtcgttgc tgagctgacc gaagtcgccc cgcacgggcc tcgcaagcgc aagcgcgtcc
    10381 aggccattga ttccggcggc atagccggcc gggaacggcg gcaccgtgtt ggcatcggtg
    10441 cgcgtggtaa agtcgtcgcc gaaatcttca agactcgagc ttgcctggag cgtgtaggtg
    10501 aggccgtcgg tcagtcggcc atagacgctg gtggccggcg ctttccaggt cgacggtatg
    10561 agaccgttgt aaagctcggg ccgcttgacg ctgtagaaca tggttggttc gtgatgctcg
    10621 ttgatgtagc cgatcggaat aagatcgatg ccgggcgccc gccagttgaa ctggtcgatc
    10681 atcttgaagt cgacccagac ctgctcgatc tcggcggtgc catgcagctt gtcgtcggaa
    10741 tcgaaaccgg cgccggcgtg ttcgaactcg atttcagcat tgaagatgat attgggcgtg
    10801 atcagatagg tcggcagcag caccagccgg tgggcgtcga acccgttctg ccactggcca
    10861 ttggctgccg ggttctgttg caggccgaac tgcatctctc cgtacgcccc gatgctcata
    10921 ccggcaaccg gcgaatcggt gagccccagt atgctgttgg gcctattgat cggcgctgtc
    10981 ctgccggtca ggtcgcgcgg cgttggtgtc gcccaatcgg gctttgctgc gccgactgct
    11041 tctttttggt ccttgggttg cttcgactgg ttgggcgtct cggcgtcctt gcgatccttg
    11101 gccggtttcc cacccgccgg cgggagggtg ggggcgggcg cctgcccgta ggcgccttcg
    11161 atcgcccggg tgtccttttg cttgagctgc ccttcaagaa cgcgaatgcg ctgctccatc
    11221 tgctccagct tcttcaacag cgcaacgtca cccgagggag cggcatttgt cttatcctgc
    11281 tccttacctc tatcttgagc ggaggtgggg ccgacgctga gcgccgtcgc ggtcagcatc
    11341 acaaggatac gccaccgtaa cgcagcaagc ggcaccgcat ggcattcggc ggcggacgcg
    11401 gcgcgatcgt tcgggccggg ggcaagcaca gagacgcaac ggcgatggca gagcatttga
    11461 ggttccaaag caaaagcggc gggttttgcc gaaatggcga gacgtcgtgc ggaacgcgtc
    11521 cacgtaaagc cacgcaatac tttgaagtca acagtaatgt gaaatctaga attagtaaaa
    11581 ataagaaatc ttggagctta tattggaatg attataattt agaataaata cagattggaa
    11641 caataataac ctgacggccg tcagtcgtcc gcggcgcggg cggtgcttgt tctcttccgt
    11701 ctggcactct acatggcgag ggcgccggac ggtgccg
//
LOCUS       DATILV010000919         6322 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2269972, whole genome shotgun sequence.
ACCESSION   DATILV010000919 DATILV010000000
VERSION     DATILV010000919.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6322)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6322)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6322
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2269972"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..861)
                     /locus_tag="VLJ17_22115"
     CDS             complement(<1..861)
                     /locus_tag="VLJ17_22115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012590395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin carboxylase N-terminal domain-containing
                     protein"
                     /protein_id="HSV25706.1"
                     /translation="MTTHAVTLPPIKRILVANRSEIAIRVFRAASELGLQTVAIYAEE
                     DKLSLHRFKADEAYRVGRGAVGELQLGPLESYLSIDEIIRVALAAKVDAIHPGYGFLS
                     ESPEFAEACATNGIVFIGPKPETMRTLGNKVAARNLAVSVGVSVMPATEALPDDEEKV
                     KHLAREVGYPVMLKASWGGGGRGMRPIESEDKLNDAVRAAKREAKAAFGKDDVYLEKL
                     VRKARHVEVQVLGDTHGNLVHLFERDCSIQRRHQKVIERAPAPYIDEGIRRALCNAAL
                     AIGQATHYVGA"
     gene            complement(1162..1896)
                     /locus_tag="VLJ17_22120"
     CDS             complement(1162..1896)
                     /locus_tag="VLJ17_22120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSV25707.1"
                     /translation="MRNVVVTGGSRGLGLAIAKKLATAGYCAIAVARKETEQLAAAVA
                     DTARENRGAIRFAPFDLGDIDKIQPFVAGLRKSFGPIYGLVNNAALGTDGALSLMANS
                     KIAELVHLNTLSPIVLTKYAVRAMMADGGGRIVNVASIVAFTGYSGLSAYSATKASMI
                     GFTRSLAREVGRMGVNVNAVAPGFLDTEMTQGMADDQRARVARRSALQRLPVVEDVGN
                     AVEFLLGDSARSITGTVLTVDAGSTA"
     gene            complement(1896..3284)
                     /locus_tag="VLJ17_22125"
     CDS             complement(1896..3284)
                     /locus_tag="VLJ17_22125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HSV25708.1"
                     /translation="MLHADTPQLRRYLQGPQSEGRFFQGLNGSVAFADLAGGTSLGGR
                     LSELVGTSVLLSTRDQLATALALIELDGVARRIVVCPPDLAASHVPEIAANAEIDAIV
                     SDRDPADFATLGILLHVGATCVVEPAAPPTSSRHTTWLLLTSGTTGAPKLVSHDVASL
                     SAPIKPTAQAPVWGTFYDIRRYGGLQIFFRAVVGGGSLILSSAGEPVADHLQRLAAHG
                     VTHLSGTPSHWRRALMSPAIRVIAPGYVRLSGEIADQAILDNLRAVFPHVGVGHAYAS
                     TEAGVAFEVNDGRAGFPASFVGVGQGDVDVKIEDGSLRLRSARTASCYVGRDAPALLD
                     PDGFVDTGDMVELRGDRYHFVGRKGGIINVGGQKVHPEEVEAAINRHPAVWGSLVRAR
                     KSPITGAIVAADVVLKDASIHSDDMVAQTEREIIELCRRHVAPHKVPAVIRFVSSLNV
                     SDSGKLLRHGRS"
     gene            complement(3271..3516)
                     /locus_tag="VLJ17_22130"
     CDS             complement(3271..3516)
                     /locus_tag="VLJ17_22130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012336157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopantetheine-binding protein"
                     /protein_id="HSV25709.1"
                     /translation="MSIKLTVLSEIEQIAEQHQKTLAPLTDDSILMNTGLDSLCFAVL
                     VARLEDRLGVDPFSASDDISFPVTLGDFVRVYENAAR"
     gene            complement(3695..4999)
                     /locus_tag="VLJ17_22135"
     CDS             complement(3695..4999)
                     /locus_tag="VLJ17_22135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetylhomoserine
                     aminocarboxypropyltransferase/cysteine synthase family
                     protein"
                     /protein_id="HSV25710.1"
                     /translation="MRSETIAIHGGYEADPTTHAVAVPIYQTVAYTFDSAEHGAALFN
                     LETDGFRYSRINNPTVDVLDKRVAALEGGVEAMCVSTGQAALNYALANLTDLGCNIVS
                     VPQLYGTTHTLFGHIFPRQGVTVRFAAGDRPADIEKLIDDDTRAVFCETVGNPAGNIC
                     DVEALADVAHKHGIPLVVDNTVATPILMKPIEFGADIVVHSLTKFMGGHGTTLGGAIV
                     DSGKFPWKDHAKRFPMFNEPDASYHGLVYADHFGQAAYIARCRSVYQRTTGSVLAPLS
                     AFLLLQGIETVALRVERHVENARRIAEFLRDSPRVEWVNYAGFVDNAYYRLAQKYLGG
                     RACSLLTFGVKGGFEAGTKFYDALKLVKRLVNMGDAKTLACHPASTTHRQMSAEEQRQ
                     AGVRPEMIRLSVGIEHVNDIIEDIDQALAATQSAAITMVAAQ"
     gene            5348..>6322
                     /locus_tag="VLJ17_22140"
     CDS             5348..>6322
                     /locus_tag="VLJ17_22140"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HSV25711.1"
                     /translation="MMTRCDTGKAAPSEKRASRAWLRALELTSPIGKASQRTFPTVIE
                     ELAEKFGGAPALLAEDESLSFRTLNERANRYARWAQTQDVRKGDTVCLLMTNRPEYMA
                     IWLGITRAGGVVALLNTNLVGTSLAHCIDLVAPKHVIVASDLAAIFENAHPFLATPVK
                     IWSHGAGMAHYPDVAVELASFPGDPLAAYERTSVSIDDRALYVYTSGTTGLPKAAKIS
                     HYRLMVWTHWFAGMMETGPTDRMYNCLPMYHSIGGAVATGAVLVVGGSVIIREKFSAS
                     RFWEDIVRFDCTLFQYIGELCRYLLLAPAHRYETQHGLRLCCGNGLRGR"
BASE COUNT         1251 a         1922 c         1933 g         1216 t
ORIGIN      
        1 ggcgcccaca tagtgcgtcg cctgaccgat tgccagcgcc gcattgcaga gagccctgcg
       61 gattccctcg tcaatgtaag gcgccggcgc gcgttcgatg accttctgat ggcgccgctg
      121 gatcgaacag tcgcgttcga aaaggtggac gaggttgcca tgcgtgtcgc cgaggacttg
      181 cacctcgacg tggcgcgcct tgcggaccag cttttccaga tagacgtcgt ccttgccgaa
      241 ggcggctttt gcctcgcgtt ttgcggcgcg cacagcgtcg tttagcttgt cttcgctttc
      301 gatcggacgc atcccgcgcc cgccgccacc ccaacttgct ttgagcatga ccggatagcc
      361 gacctcgcgg gccagatgct tcactttctc ttcatcatcc ggcagtgctt cggtggccgg
      421 cattacggac acgccgaccg acaccgcgag attgcgcgcc gcgaccttgt tgccgagcgt
      481 gcgcatcgtc tcgggcttgg gtccgatgaa cacaatgccg ttcgtcgcgc aggcctctgc
      541 gaattccgga ctttccgaca ggaagccgta tcccggatgg atcgcatcca ccttcgccgc
      601 caaggcaacg cggataattt cgtcaatcga aaggtaggat tcgagtggac cgagctgtaa
      661 ttcgcccaca gcgccgcgcc cgacccgata ggcctcatcg gctttgaacc ggtgcagcga
      721 gagcttgtcc tcctccgcat agatggcgac agtctggagg ccgagctcgg aggccgcgcg
      781 aaacacccga atcgcgatct cgctccggtt ggcgacgaga atacgcttga tcgggggcag
      841 cgtgaccgcg tgtgtcgtca tcgtggagtc ctgtcctgcc ccgacgcccg cgattgttcc
      901 agtgaatctg cagaattcat ttgacacatg gcagcaccaa ggcgcacatc ggccacatcg
      961 ctcccacatc tggattcggt cattctgcgg cgccaccgta acgtggcgag cgcggaatcc
     1021 ctaaccacag gtgggaacgg aacgcggacg acaggtcaaa agtcaaaaaa gacgttcggg
     1081 aatttggatt cctgattcgc acatgagcgc gccccggaat ggcggcgcgg atgatttgat
     1141 tttgaattca aaaacgctgg actacgccgt gctccctgca tcaacagtca acaccgtgcc
     1201 ggtgatgctg cgcgcactat cgccaagcag gaactcgacc gcgttgccga cgtcttccac
     1261 caccggaagc cgctgtagag cgctgcggcg tgccactctg gcgcgttggt cgtccgccat
     1321 gccctgggtc atttcggtat cgaggaatcc gggcgcgacc gcattgacgt tgacccccat
     1381 gcgcccgacc tcgcgggcga gcgagcgggt aaacccgatc atcgaagcct tggtggcgct
     1441 gtaggccgaa agcccgctgt aacccgtgaa ggccacgatc gacgccacat tgacgatgcg
     1501 gccaccgccg tccgccatca tggcgcgtac ggcgtatttg gtaagcacga tcggcgataa
     1561 cgtattgaga tgcacgagtt ccgcgatctt ggaattcgcc atcagcgata gggcgccgtc
     1621 ggtgcccagc gcggcgttgt tcaccaggcc gtagatgggc ccaaagctct tgcgcaatcc
     1681 cgccacgaag ggctggatct tgtcgatgtc gccgagatcg aatggagcga accggatggc
     1741 gcccctattc tcgcgcgcag tgtcggcgac cgcggcggcg agttgctcgg tttccttgcg
     1801 ggcgaccgcg atggcgcagt agccggccgt tgcgagcttt ttggcgatgg ccaggccgag
     1861 gccgcggcta ccgcctgtga ccacaacatt gcgcatcatg aacgaccgtg gcgcagaagc
     1921 ttgccggagt ccgatacgtt caggctcgaa acgaagcgga tcactgccgg cactttatgt
     1981 ggcgcaacgt gccgccggca cagctcaatg atttcgcgct cggtctgggc gaccatgtcg
     2041 tcgctgtgga tcgatgcgtc cttgagtacc acatccgccg ccacgatagc gccggtgatc
     2101 gggctcttgc gcgctcgcac cagggagccc cacacggcgg gatggcggtt gatggccgcc
     2161 tcgacctcct cgggatgcac cttctgaccg cccacattga tgatgccgcc cttgcggccg
     2221 acgaagtgat atcgatcgcc gcgcagttcc accatgtcgc cggtgtcgac aaagccgtcg
     2281 gggtcgagca gcgccggcgc gtcgcgcccc acataacacg aggcggtgcg cgccgagcgc
     2341 agccgcagcg aaccgtcctc gatcttgacg tcaacgtcgc cttgaccgac gccaacgaaa
     2401 cttgccggaa agccggcacg accgtcattg acctcgaaag ccacgccggc ctctgtggag
     2461 gcataggcat gaccgacgcc gacgtgtgga aagacggcgc gcaaattgtc gaggatggct
     2521 tgatcggcga tttcgcccga cagccgcaca tagccaggcg caattacgcg tatggcgggg
     2581 ctcatgaggg cgcgccgcca atgtgacggc gtgcccgaaa gatgggtgac gccatgggct
     2641 gcgaggcgtt ggagatgatc cgcgaccggc tctccggcgc ttgacagaat gagtgagccg
     2701 ccgcccacca cggcgcggaa gaagatttgc aggccaccat agcgacggat gtcgtagaac
     2761 gtaccccaaa cgggtgcctg cgcagtcggc ttgatcggcg ccgagaggct ggcgacatcg
     2821 tggctgacca gcttcggtgc acctgtggtt ccggacgtca gtagcaacca cgtggtgtgg
     2881 cggcttgagg tcggcggagc ggcaggctcc accacacagg tcgcgccgac atggagcaga
     2941 attccaagag ttgcaaagtc ggccgggtcg cgatccgaca caattgcgtc gatctccgca
     3001 ttggcggcga tttccggaac atggcttgcc gccaaatcag gggggcacac cacgatccgg
     3061 cgggcaacgc cgtccaattc gatgagcgcg agagccgtgg cgagctgatc acgcgtcgag
     3121 agcagaaccg aggttccgac gagttcgctc aggcggcctc cgaggctggt tccgccggca
     3181 agatcagcaa atgccacact gccgttcaag ccttggaaaa accgaccttc cgattgcggc
     3241 ccttgaagat aacgccgaag ctgcggcgta tcagcgtgca gcattttcgt agacccgcac
     3301 gaaatcgccg agggtcaccg gaaagctgat atcgtcagat gcggagaatg ggtcgacgcc
     3361 gagacggtcc tcaagccgcg ccacgagaac cgcaaagcaa agcgaatcga gtcccgtgtt
     3421 catcaggatc gagtcgtccg tcagcggtgc aagagttttc tgatgttgct cggcgatctg
     3481 ttcgatttcc gagagcactg ttaactttat cgacatcgaa acgggccttt tggttatgct
     3541 cataacacta taatacacat cacgccgtga gcaagccgac gcgacgcaac tcgacaattt
     3601 atcgtcaacg cggaacaccc tcagggtgac ttgtcatcgt ctggcatcaa agccgggcaa
     3661 tgacatcgga gcgtccgtcg ccgccgatca tatcctactg cgccgcgacc atcgtaatgg
     3721 ccgcggattg ggtcgcggcg agcgcctggt cgatatcctc gatgatgtca ttcacatgct
     3781 caatgccgac gctcagccgg atcatctcgg ggcgaacgcc ggcttggcgc tgctcctcgg
     3841 ctgacatttg ccgatgcgtc gtggaggcgg ggtggcaggc gagcgttttt gcgtcaccca
     3901 tgttgactag acgtttgacc agcttgagag cgtcgtagaa tttcgtccca gcttcaaagc
     3961 cacccttgac cccgaaggtg aggagcgagc aggcgcgccc gccgagatat ttttgtgcaa
     4021 ggcggtaata cgcattgtcg acaaagcccg cataattcac ccattcgaca cgcggactgt
     4081 cgcgcaaaaa ttcggcgatg cgccgcgcgt tctcgacgtg acgctcgacg cgcagcgcta
     4141 cggtctcgat gccttgcagc agcaggaagg cggagagcgg tgccagcacc gatcccgttg
     4201 tacgctgata gacgctgcgg caccgcgcaa tgtaggcggc ctgaccgaaa tgatcggcat
     4261 agaccagccc gtggtaggat gcatcgggtt cgttgaacat cgggaagcgc ttggcgtggt
     4321 ctttccacgg gaatttgccg ctgtccacga tagccccgcc gagtgtcgtg ccgtgccccc
     4381 ccatgaattt ggtgagtgaa tgaaccacga tgtcggcacc gaactctatc ggcttcatta
     4441 agatcggggt cgcgaccgta ttatcgacga ccagcgggat gccgtgcttg tgggcgacat
     4501 ccgccagcgc ttcgacatcg cagatgtttc cagccgggtt gcccacggtt tcacagaaca
     4561 ccgcacgggt gtcatcgtcg atcagctttt cgatgtcggc cggccgatcg cccgccgcga
     4621 accggacggt caccccctgc cgtggaaaga tgtgcccgaa cagcgtgtgc gtcgtgccgt
     4681 agagctgcgg gaccgaaacg atgttgcagc caagatcggt caggttcgcc agcgcatagt
     4741 tcagcgccgc ctggccggtg ctgacgcaca tggcctcgac gccgccctcc agggccgcga
     4801 cccgcttatc cagcacgtcg acggtaggat tgttgatccg gctgtaccgg aagccgtcag
     4861 tttcgagatt gaacaaggcg gcgccgtgct cggcagaatc gaaagtatac gcaacggtct
     4921 ggtagattgg taccgcaacc gcatgagtcg tgggatcggc ctcataaccg ccgtgaatcg
     4981 cgatggtctc gcttctcata gcctctcctg catgggcacc cgttgcacct taatggtggc
     5041 ggatgacgcg atcctgtgat tggtgcgtcg gagcacgctc cgatcaccgt cctagttgtt
     5101 acggcaaggg cagacaatac agacgtaaga attaccatag gacaccctta actgttaagc
     5161 tcgttgtcga ccgttaaggt agtcgtcacg tttttgtatc aagccattgc aatcttggga
     5221 gattccgaga tatctagcgg gcgggcgacg ttatccgaaa tcatcgccgc attggacttg
     5281 ggcaacaagt taatataaca ttaaaatgtt aaggccgccg agacaactcg ttgatgatca
     5341 aaattcgatg atgacgcgct gcgacaccgg aaaagcggcg ccgtccgaaa aacgtgcgtc
     5401 gcgggcgtgg ttgcgcgcct tggagctaac ctccccgatc gggaaggcat cccagcgcac
     5461 ctttccgacc gtgatcgagg aactggcgga gaaattcggc ggtgcaccgg ccttgctggc
     5521 agaagacgaa agcttgagct ttcgcacgct gaacgaacgt gcgaaccgct acgcccgctg
     5581 ggcgcagaca caggatgtcc gcaagggcga caccgtctgc ctattgatga cgaacaggcc
     5641 ggaatacatg gcaatctggc tcggcattac ccgggcgggc ggcgtggtcg cgctgctcaa
     5701 caccaacctt gtggggacgt cgctcgccca ctgcatcgac cttgttgcgc cgaaacatgt
     5761 catcgtggcg tctgaccttg ctgcaatatt tgaaaatgcg catccgtttc tcgccacgcc
     5821 ggtaaagatc tggtcgcatg gcgccggcat ggcgcattat ccagatgtcg cggttgaact
     5881 cgcaagcttt ccgggcgatc cgctcgcggc gtatgagcgc acatccgtga gcatcgatga
     5941 tcgcgcgctt tacgtttaca catctggcac cacgggcctg ccgaaggcgg caaaaatcag
     6001 ccactaccgg ttgatggtct ggacccactg gttcgccggc atgatggaga ccggaccgac
     6061 cgaccgcatg tataattgcc taccgatgta tcacagcatc ggcggtgcgg tcgcgaccgg
     6121 cgcggtcttg gtcgtcggcg gctcggtgat aatccgggaa aaattctccg cgagccgctt
     6181 ctgggaggac atcgtacgtt tcgactgcac gctgttccaa tacatcggcg aattgtgtcg
     6241 ctatctttta cttgcgcccg cgcatcgata cgaaacgcag cacgggctgc gactgtgctg
     6301 cggcaacggg ctgcgcggca ga
//
LOCUS       DATILV010000920         6541 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3040092, whole genome shotgun sequence.
ACCESSION   DATILV010000920 DATILV010000000
VERSION     DATILV010000920.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6541
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3040092"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..180
                     /locus_tag="VLJ17_22145"
     CDS             <1..180
                     /locus_tag="VLJ17_22145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25712.1"
                     /translation="TATATATATATTTATTATATILTKGTWRKWMEAVFQSQPAKGGQ
                     ESPSVKVTPADLAYR"
     gene            1211..1495
                     /locus_tag="VLJ17_22150"
     CDS             1211..1495
                     /locus_tag="VLJ17_22150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25713.1"
                     /translation="MGKILALTILALAISSASMIASAQDAITPSTKPSVHSKRERAPP
                     KPAGPVIASASPAASCLPWYAIFFGAWTTSRHCACAFSSCSSPLVLGVGF"
     gene            1767..2897
                     /locus_tag="VLJ17_22155"
     CDS             1767..2897
                     /locus_tag="VLJ17_22155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25714.1"
                     /translation="MNFNRITALALAATACATLQFVSSADAYAQATLVQATQVAGFGL
                     PSGDILAPNTPGGGVVIGGNFYSGDGAQGFRHWQPADPTNPDPINSGMLIFDVDPSKS
                     LGGGTACIPICKVGQIAYDGNLTAYIAAYDHPKGQPFGLTNPGIHRVTLDGVNGFVTG
                     DTLLAPTFGLAGDLPTAVALGPDGNLYVAFLKNGNVKRITNPSLFDPNNDPNKTQVVQ
                     SVGGTPNGRSALGLAFIGPDLYVVHDQGLAVIRNAVALTPNGAFLCQGGCTATPITDG
                     FAGISHVGITTDGINRLYLAINGHGVWRYAISSGAMTQISIGGLNPDLAVNLFAFVGG
                     HSNLLQLDRLGNLWIGDDISDGTVNFSGRIWRISSGDLSSIP"
     gene            3500..5965
                     /locus_tag="VLJ17_22160"
     CDS             3500..5965
                     /locus_tag="VLJ17_22160"
                     /EC_number="1.11.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF015131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HSV25715.1"
                     /translation="MSTNQKHEPSGKRRLSNRNHGLWITTAISAVTIYCGSGTFELRA
                     NNGNSALNQLTAPVAPADLPIAPLREKPTIANTAGIIIDKLAAQQLGKAFFWDAQVGS
                     AGQACASCHYHAGADVRVTNQINPQGSQFSAVPGPDAQLGPGDYPFHLLANITDRDSA
                     ILSDSNDVTGSQGTFEGTFIPNTSTAAVLSAAAPSAAQIASGTAPPVAPDQCTYSIDP
                     TDPFNNGTTLLYRRVTGRNTPSNINAAFNYRQFWDGRANNTFNGVDPFGRRTNLANPA
                     AGILVSASPDGVPTLRKIEISNASLASQAVGPALSPVEMSCAGRTFADLGRRLINAGA
                     LAGQRVHPEDSLFSQTLGLINTSGAGLGTTYADMIRRAFNPFYWRNTARTTITSTGVV
                     QVDPDGYTQMEHNFSFFWGLAIQEYEALLISDRSRFDLGLLNQSERKGMDIFNSGKAK
                     CFNCHSGPLFSAATMTEADPGNPERVERMIMGDGTPALYDHGFYNIGVRPTFEDRGIG
                     GVDGTALGFDLSFARQYKWQMLGRHDRVADNFLVNPCLFATSFNSRNCSGQPALRGST
                     PATAPRDSVDGAFKVPILRNIGLTPPYFHNGGQATLHDVVNFYNRGGDRRGAPNADTS
                     GYPLSDQAIAVLLNGANVPANLVQPPNSFGQTNPTNLDANIGNDSGGEVKNANAGLTL
                     VGITPGGSGRGGRGGNGGSGGNGGQIANTATLTQTGGGGGGGPKGLGLSPRDVDDVVN
                     FLLSLTDNRVACHADVFDHPELVLFFGQNPVPAAPGSIKSADTKVLLPAVGRRGLATC
                     FPNTGELFGELQDVFMSIVTPVP"
     gene            6033..>6541
                     /locus_tag="VLJ17_22165"
     CDS             6033..>6541
                     /locus_tag="VLJ17_22165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25716.1"
                     /translation="MRTRNSTTHLRQIAAVAIASTFLNQNFAWAVCSDGTNLPAEGFV
                     VGQPPVVDANNWSPGVFTGTTGSIWVPDNSVYEHNDPGQPLTGGGHNWVFDQGSTLCK
                     ETDVGAAGALPTGWSIPPNNPTDCVILPVIVQGMVTNFGDIPYQGDAITPTCDPTLLS
                     QPGIPNPDNT"
BASE COUNT         1395 a         2059 c         1743 g         1344 t
ORIGIN      
        1 accgccaccg ccaccgccac cgccacggcc accaccacgg ccaccaccgc caccgccacc
       61 atccttacca aaggcacttg gcgcaaatgg atggaggccg tttttcaaag ccagcccgcc
      121 aaaggtggtc aggagtcccc atctgtaaag gtcacgccgg ctgatttggc ctatcgatag
      181 cgccttgaca atttctgctc ggttgtttcg ggcgttctga gcttctcgct gccgggcacg
      241 tgacgcttta gtcgacaaaa agtacattat tccgtctcct ccacctaatg gcgtcccact
      301 acctttgaat gaacctgcga ggtccatctc cgttgatcag ttcgacattc acaatccaga
      361 cggaaaacag gggcgtcagt gcgggcggtg gattcacgtc caccccgcgc agggccgcct
      421 gcctctgcgt cagaccacaa atgcacttga atgttgttac gcccccttca acgcgatttc
      481 cgacctgcag ctctctgcat gattaagcgt aatgtcgcgc ttcatggtct tctcgctgca
      541 tatcctctcc ccgcagcgtt cccccacgtt gaccaaaccg cgccagccgt cccgcgaaaa
      601 actctgtgat gatcaagtct caaatttttt cgtcggtaaa atgtcaggaa gtggttcaga
      661 tttgacgatt tcaatgacat tgcggctcgc aactgacata tccgtcagta aatgacttat
      721 ctgtcagaaa cggctccgca gcggcctgga atcaaccgga tactgccacg ttgttgtttg
      781 aagcgtggcg cgatcagggt ggtcgcggat cagtggtggt gccggcaccc gataccctag
      841 cgggaagtcg ctgaccgcca ctcgaatgta acggcaggac gaacgcagcc acgggattac
      901 gatcgcggca tgtcgaccaa gacaccggct gtgccccaac acatcactgt cacaagtcca
      961 tctctcgttg taagtccatc gtcagctccc gtgtgatact ccccaccccc atcgcggtgt
     1021 tgagccttaa tggagcctta gtggatagac ataaatcacg ttcgcgcatt tgctgttgcg
     1081 cacaatcgtc caacccgacg actttccatc gacgactttg catcatggtc atcgattgtt
     1141 gggatgggca cgatcgccag ctaaccggcg gcacgagctg cgctgcgtgc aggcagatgg
     1201 agttttaggt atgggaaaaa ttctcgcttt gacgattctg gcgctggcga tctcgagcgc
     1261 ttcgatgatt gcgtctgcgc aagatgccat cacgccatcg acgaagccgt cggtacactc
     1321 caagcgcgag cgtgctccgc ccaagcccgc tggtccggtc atcgccagtg catcaccggc
     1381 ggcctcctgc ctgccgtggt acgcgatatt ctttggcgcc tggactacga gccgccattg
     1441 cgcctgcgca ttttcgtcgt gctccagccc ccttgtcctg ggagtcggat tttgacattc
     1501 tcttcttgca atcaggtgca cgacgcgggc agtgacagcc tcaatgatat ccgcgtaacc
     1561 gtataaccga gcgcgtatct gcaggtggcc gcgagccctt tgccaatggc ggggctctcc
     1621 cacggagcca ccgcaaaaat gtcggtccgt agctggtgtt cagtgtacag cgcgagtgga
     1681 gctttccctc gtggcgacga gtgcgtttgt gcgggtcgat catctcaatg caatccaaca
     1741 accgaaatcc cagaagagag aaaacaatga acttcaatcg cataaccgca ctggcgctcg
     1801 cagcaaccgc gtgtgctact ctacagtttg tgtcgtcggc tgacgcctat gcacaagcca
     1861 cactggtaca agccacacaa gtcgctggat ttggactacc gtccggcgac atcttggctc
     1921 cgaacacgcc cggcggcggc gttgtcatag gtggcaactt ttattccggc gacggcgctc
     1981 aagggttccg ccactggcag cccgccgatc caacaaatcc cgaccccatc aacagcggca
     2041 tgctgatctt tgatgtggat ccgagcaaat cgctcggcgg tggcacggcc tgcattccca
     2101 tctgcaaggt cggtcagatt gcctatgacg gtaacttgac tgcgtatatc gctgcctatg
     2161 accacccaaa gggacagcct ttcgggctca ccaaccccgg catccatcgc gtgacgctcg
     2221 atggagtgaa cggtttcgtc actggcgaca ctctgctggc accaacattc ggcttggccg
     2281 gcgacctgcc gaccgctgtc gctctcggcc ccgacggcaa tctctatgtc gcgttcttga
     2341 agaatggcaa cgttaagagg atcacaaacc cgagtctatt cgacccgaac aacgacccga
     2401 acaagaccca ggtcgtgcag tcagtcggcg gaactcctaa cggtcgctcc gctctcggcc
     2461 tcgccttcat cggccccgac ctgtatgtcg tccacgatca agggttggcg gtcatccgca
     2521 acgccgtcgc cttgacgcca aatggcgcct tcctgtgcca gggtggttgc accgccacgc
     2581 cgatcactga cggattcgcc ggcattagcc atgttggaat caccaccgat ggcatcaacc
     2641 ggctgtatct cgccatcaat ggacatggcg tatggcgcta cgcgatttcc agcggcgcga
     2701 tgacccagat ttccatcggc ggcttaaatc ccgatctcgc ggtcaatctc tttgccttcg
     2761 tgggcggaca cagcaatctc ctgcaactgg atcggctcgg caacctgtgg atcggcgatg
     2821 acatatcgga tggtactgtc aatttcagcg gacgcatctg gcggatctca tccggcgatc
     2881 tatccagcat accatgacgc gatgcatccc ctccgcgtcg cggtggggat gccctctttg
     2941 agccatccga acgttcgatt gccgaacgca catacgaggt cgtcaagccg ctttccgtgt
     3001 gctgacgcag caagctaatt tactgccttt ccaacaagct tcgcctttca agcaaacagt
     3061 cgacggcgat tgcaatctgc cgtcggatct gtcgagcgct aacattttat gatggcgcga
     3121 gcatccgacc aaggtacagg tcggacacac caaagggacg cgactgaaga gaaactcagt
     3181 ctaaggaata cgtacactcc catacgtggt ttgccatacg tgctcagcca tacgtactcg
     3241 cacgattgtt ggcaccgtct gcccgtggtc aaaaaatacc ggtcaagaac ctaacaaggc
     3301 attcgccgga tgcgaccaag gtacggatta ggcgacctaa ggggtccgac cgaagagata
     3361 ttcactcgtc agaacgcgta cctcagcccg attgtttgca caatctgctc atggtccaaa
     3421 acaaatcgat aactcgctca ataccaccgt gaaaactacc acacggaacc tgacaaattg
     3481 ccaacaaaaa gaggtcgcca tgagcacaaa ccagaagcat gagccatccg gcaaacgacg
     3541 gctttccaat cgaaatcatg gtttgtggat aacaactgcg atcagtgcag tcaccatcta
     3601 ttgcggaagc gggactttcg aactgcgtgc caataacggc aactcagcgc tcaatcaact
     3661 cactgctcct gttgcgcctg cagatctccc catcgccccg ctgcgcgaaa aaccgacgat
     3721 cgccaatacc gccggcatta tcatcgacaa actcgccgcg caacaactcg gcaaggcgtt
     3781 cttctgggac gctcaggtgg gcagcgccgg acaggcctgt gctagctgcc attaccacgc
     3841 cggcgcggat gtccgggtga cgaaccagat caacccccaa ggttcacaat tcagcgcggt
     3901 accgggacca gacgcccaac tgggaccagg ggactatccg ttccatctcc ttgccaacat
     3961 cacggatcga gattcggcga tcctgtccga ttccaacgac gttaccggat cgcagggcac
     4021 gtttgaaggc actttcattc caaacacctc caccgccgcg gtcctgtcgg ctgcggcccc
     4081 gagcgcggcc cagatcgcga gcgggacagc cccgcccgtc gccccggatc aatgcaccta
     4141 ctcgatcgat ccgaccgatc cgttcaacaa cggaacgact ttgctgtatc ggcgggtcac
     4201 tggacgcaat acgccgagca acatcaatgc ggcgttcaat tatcgccagt tctgggacgg
     4261 ccgggccaat aataccttca acggcgttga cccgttcggg cggcgcacca atctggccaa
     4321 tccggccgcc ggaatcctcg tgtccgcttc tccggatgga gtgcctacgc tccgaaagat
     4381 tgagatatcg aatgcgagcc ttgcctcgca agctgtcgga ccagcgctca gccccgtcga
     4441 aatgtcgtgt gccggccgaa ccttcgcgga tcttggacgc cgcttgatca acgccggcgc
     4501 gctggccggc cagagagtgc acccggaaga tagtttgttc agccaaactc taggattgat
     4561 caacacatcc ggcgccggcc ttggcaccac atatgcggac atgattcgtc gcgcctttaa
     4621 tccgttttac tggcgcaata cggctcgcac caccatcacc agcaccggtg tcgtccaggt
     4681 tgatcccgat ggctataccc agatggagca taatttctcg ttcttctggg gattggcaat
     4741 tcaggaatac gaagccctcc tgatttcgga ccggtcgaga ttcgatctcg gtttgttgaa
     4801 tcaatctgaa cgcaagggaa tggacatatt caacagcggt aaggccaaat gcttcaactg
     4861 tcatagtggt ccgttattca gcgccgcgac catgaccgag gcggacccgg gaaatccgga
     4921 gcgcgtcgag cgcatgatca tgggggacgg caccccggct ctgtacgatc atggcttcta
     4981 taatatcggg gttcgtccga cttttgagga tcgcggcatc ggcggcgtcg atggaaccgc
     5041 gctgggtttc gacctctcgt tcgcacgcca gtacaaatgg cagatgctcg gtcggcacga
     5101 tcgcgttgcc gacaacttcc tggtcaatcc ctgcctgttt gcgacatcct tcaattcgcg
     5161 caattgctca ggccagccgg cattgcgcgg ctccacgccc gcaaccgcgc cgcgggactc
     5221 cgtagacggg gccttcaaag taccgatcct gcgcaatatc ggcctcactc cgccgtactt
     5281 tcataatggc ggacaagcca cgctgcacga cgtggtcaat ttctacaatc ggggcggcga
     5341 ccgccgcggc gcaccgaatg ccgatacatc cggctatccg ttatcggatc aggccattgc
     5401 ggttttgctc aacggcgcca acgtgccggc caatctggta cagcccccga actcgttcgg
     5461 acaaaccaat ccgacgaacc tcgatgcaaa tatcggcaac gattccggcg gagaggtcaa
     5521 gaacgccaat gccggattga ctctggttgg catcactccc ggcggcagcg ggcgcggtgg
     5581 gcgtggcggc aacggtggca gcggcggaaa cggcggccaa atcgcaaaca ccgcgactct
     5641 gacgcagacc ggcggcggtg gtggtggcgg ccccaaaggt ctcggactgt cgccgcgtga
     5701 cgtcgatgac gtcgtaaatt tcctgctttc gctgaccgac aaccgcgtcg cgtgccacgc
     5761 cgacgtattt gatcatccgg aactggttct gttcttcggt cagaatcctg tgcccgccgc
     5821 cccgggcagc atcaagtctg cagacacaaa ggtgcttctg ccagctgtcg gaagacgtgg
     5881 ccttgcaacc tgcttcccga acaccggcga attgtttggt gaactgcagg acgtgttcat
     5941 gagcatcgtc acgccggttc cgtagtgctc cgaatccggc ggcccgtttt acagctctcc
     6001 ctatcagcct aaacaaaaaa atgaggaatg agatgagaac gcgaaacagc accacccatc
     6061 ttcgccagat cgccgctgtg gccatcgctt cgacctttct gaatcagaat ttcgcctggg
     6121 cggtctgctc agacggcacg aacctcccgg ccgaaggttt cgtggtcggt cagccgccag
     6181 tcgtcgatgc gaacaactgg tcgccgggcg tctttaccgg caccaccggc tccatatggg
     6241 ttccggataa ttcagtctac gaacacaatg atcccggtca gccgttgacc ggcggcggcc
     6301 ataattgggt cttcgatcaa ggctcaacgc tgtgcaagga gactgacgta ggagccgccg
     6361 gcgcattgcc gaccggatgg tcgattccgc cgaacaaccc gaccgactgc gttatcctgc
     6421 cggtcatcgt gcagggcatg gtgaccaatt tcggcgatat cccctaccag ggcgatgcca
     6481 ttacgccgac ctgcgacccg accttgctca gccaaccggg cattcccaat ccggacaaca
     6541 c
//
LOCUS       DATILV010000921         5394 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4831737, whole genome shotgun sequence.
ACCESSION   DATILV010000921 DATILV010000000
VERSION     DATILV010000921.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5394)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5394)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5394
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4831737"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(98..184)
                     /locus_tag="VLJ17_22170"
     tRNA            complement(98..184)
                     /locus_tag="VLJ17_22170"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(148..150),aa:Ser,seq:cga)
     gene            515..652
                     /locus_tag="VLJ17_22175"
     CDS             515..652
                     /locus_tag="VLJ17_22175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009026354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25717.1"
                     /translation="MRFRPAVWVGAGLVGVLTVGTILLWARYGSAVFFEMVMAGLAMC
                     F"
     gene            691..1290
                     /locus_tag="VLJ17_22180"
     CDS             691..1290
                     /locus_tag="VLJ17_22180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031966 - mitochondrial membrane
                     [Evidence IEA];
                     GO_process: GO:0033617 - mitochondrial cytochrome c
                     oxidase assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HSV25718.1"
                     /translation="MGTGASRLLVISTAFFAGLVLCLGVILFVGGRGTGTSVLQAAPI
                     GGPFQLIDQDGRPFSDQDLKGKPFLVFFGFTHCPDVCPTTLFEISEIMRKLGSEADRT
                     AALFISVDPERDTPEAMKDYLASFDPHVRGLTGDATALAAVARGYRVYYKKVPLEGDD
                     YTMDHTAIVYLMDKDGQFVSPFNMKRTVEMAVGDLRKHL"
     gene            1989..2846
                     /locus_tag="VLJ17_22185"
     CDS             1989..2846
                     /locus_tag="VLJ17_22185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009026356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HSV25719.1"
                     /translation="MSVVLTGAGFAALADAPQVLAQAAVTNRPAGPAVVPGFWDPRRR
                     PERPDLARLTAVRFMTEVDYPPFNFAGPDGNPAGFNVDLARMVCEELKVTCTVQMRRF
                     DTLLDSLDQNRGDAAIASIAVSEQTRRRADFSDPYYRPSARFVTRRDTTIDALTPEAV
                     EGKKVAVVSGSAHEQYLRTLFTEADVRGFPDSEAAREALRRGEVDFLFGDGFALSFWL
                     NGASSGGCCVFAGGPFVESRYFGEGIGVAVKRGNSTLRLAINWALFRIWETGRFTDLW
                     LRYFPISPF"
     gene            2892..4532
                     /locus_tag="VLJ17_22190"
     CDS             2892..4532
                     /locus_tag="VLJ17_22190"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018460039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HSV25720.1"
                     /translation="MSTAMIAPDVAGLRALAEQSNAWPFEEARKIVARLKHHPKDEVI
                     FATGYGPSGLPHIGTFGEVARTTMVRHAFRVLTEDKVHTRLVAFSDDMDGLRKVPDNV
                     PNREMLAAHLGKPLTRIPDPFSNDHPSFGAANNARLRAFLDRFGFDYEFASATDYYAA
                     GRFDATLLRMLAAYDQVMAIILPTLGPERRTTYSPFLPISPASGKVLQVPMIAHDVAR
                     GTITYVEPDTGETIETPVTGGRIKCQWKADWAMRWVALGIDYEMAGKDLIDSVKLSGE
                     ICRALGGRPPEGFNYELFLDDKGQKISKSKGNGLTIEEWLRYASPESLSLFMYREPKA
                     AKRLYFDVIPRHVDEYQQFLEGYERQDAKQRLTNPVWHIHAGDPPRPDVPISFTMLLR
                     LVSASNAENADTLWGFIGRYWPGMTPQSAPRLNQHVEHAIHYFRDFVLPAKKFRVATD
                     TERAALMDLRDALSQLPPDSTAEKIQTVVYEIGRRPPFLGKINTKDGRPGVSLDWFNM
                     LYQVLLGEEKGPRFGSFVAVYGLGNTIDMIDGALTRSA"
     gene            complement(4674..5303)
                     /locus_tag="VLJ17_22195"
     CDS             complement(4674..5303)
                     /locus_tag="VLJ17_22195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSV25721.1"
                     /translation="MLTHAQIWMAIDRLAARAKLSASGLAKRAGLDPTTFNKSKRITP
                     DGRARWPSTESVSKSLAATGATLDQFVALISDQARPSTEAVPLIGLAEAGASGYFDDS
                     GFPAGKGWDAIPFPAVEDAHAYALEISGDTLLPAYRDGTIIVVSPAAPIRRGDRVVVK
                     TKGGEVMAKELKRKTAKTLELKPLNPVHADRMLAAEDVLWVARIVWASQ"
BASE COUNT          997 a         1658 c         1655 g         1084 t
ORIGIN      
        1 gacgacggac ggcaaggtca aacgatggat ttgcgagtta tgccgaatta acgggggttt
       61 ttggatattc tggcgaacga tcggcggcgg gatggcgcgg agagggaggg attcgaaccc
      121 ccgatacggt tgcccgtatg ccgcatttcg agtgcggtgc attcaaccac tctgccacct
      181 ctccatccaa ttgaaatcta tcgtgaattc aattgcaaat cagcagaatc cttgtgctcg
      241 gcgccaactt tgttgagacc gtcgcaatac agacgaattt tgggcgccgc cttatagcac
      301 cttagaagat ggcgtcgagt agcaatgcgc tatccgatgc ggcaaatcgg ccaggtcggt
      361 acaccacggg tggaacctgc aacgaacctc ttggcgcatc gagccgccgt tgggtgcgct
      421 ccgttggtgc ttgtagggca ccgaattcgc gcttatgtca tcgtcggaac acacagctat
      481 ccttatgccg aacagcgtta tctcaccgac atcgatgcga tttcggcccg ccgtctgggt
      541 cggcgctggg cttgtcggtg tgttgacggt cgggactatc ctgctgtggg cccgttatgg
      601 cagcgcggtg ttctttgaga tggtcatggc tggccttgcc atgtgttttt gaagtgcggc
      661 acgaggaagt ccgaacacga gggtgaacat atgggtacag gggcgtcgcg gcttctggtg
      721 atttcaacgg cattctttgc cgggctggtg ctatgcctcg gcgtcatcct atttgtgggc
      781 ggtcgcggca ccggaaccag cgtccttcag gcggctccca ttggcgggcc tttccagttg
      841 atcgaccagg acggacggcc gttcagcgac caggacctca aaggcaagcc cttcctggtg
      901 ttcttcggat tcacccattg tccggacgtc tgcccgacca ccctgttcga gatttctgag
      961 attatgcgca agctcgggtc tgaggcggac cgcacggcag cgctgttcat ctcggtcgat
     1021 ccggaacgtg acacgcctga ggcaatgaaa gattacctgg cgagtttcga tccgcatgtg
     1081 cgcgggctca ccggcgatgc cactgccctg gcggcggtgg cgaggggcta tcgggtctat
     1141 tataagaagg tgccgctcga aggtgacgac tacaccatgg accacactgc gatcgtctat
     1201 ttgatggaca aagatgggca gttcgtttcg ccattcaaca tgaagcgcac cgtcgagatg
     1261 gccgtcggtg atctgcgcaa gcatctttga ggagtgcacg cactgcgatc tgggcagccg
     1321 cgtgatggcg ccctgacctt acgatgcccc cgctacatcg cgcgaatggc cgaatcgcag
     1381 ttccggccat cgtaacgtgg tcgctagcgt cccttcggtc agcaacggcg cgggtgacgc
     1441 cagcaccagc tgtcacgata ccaatggtag cgatgatgcc accaaacgtt ctgcgtcata
     1501 tcgacagtct tggcagcgga gcccaaggcc ggcccgtaca ccggcgcggc cacggccgtc
     1561 acgctttcgg cgaacccaag gcttatggcg gttattgcta cgaatattgt cgtgcgcatc
     1621 gttttttccg ttatcgaatc cgtcctggca taaactacta tgccagcgta aatgacaggt
     1681 gaacggctga actaaagtga attgcaagtg gcgtgttgcc acttcgcatt ggcaacaacg
     1741 atctggcgtg gtcttgctgc cctaggttgg ctgatattgc cctcatgttc ggatataacc
     1801 ccgatcccag cacgttgcgg tcagtcatga taaagcgcgc gcgaatcagc agtcccgtcc
     1861 atgatgagcg cctgtcgacc cggcgctggt tccgtcgatc gagatctcgg aaaccattcc
     1921 gagccgccgc ccgatccctc gcgctccgaa gcgcccccag tgcttggcat ccgttcagcc
     1981 gcctgatttt gagcgtcgtg ttgactggcg ccggattcgc ggcactcgcc gacgcccccc
     2041 aggtgctcgc tcaagccgca gtcaccaatc ggccagccgg gccggccgtg gtgccgggct
     2101 tttgggatcc gcgccgccgt cccgagcgac ccgaccttgc acgcctgacg gccgtgaggt
     2161 tcatgacgga agtggactac ccgcccttca actttgccgg ccctgacggc aatccggcag
     2221 gcttcaatgt ggatttggcg cggatggtct gcgaggagct caaagtcacc tgcacggtac
     2281 aaatgcggcg cttcgacacc ctacttgatt ctcttgacca gaaccgcggc gacgctgcga
     2341 ttgcctcgat cgcggtttca gagcaaaccc gtcggcgcgc cgatttctct gatccctatt
     2401 accggccgtc ggcccgcttc gtcacccgcc gcgataccac gattgacgcc ctcacaccgg
     2461 aggcggtcga gggtaaaaag gtcgccgtag tgtccggttc ggcccatgag caatacctgc
     2521 gcacgctctt caccgaggcg gatgtgcgag gctttccgga ttccgaggcg gcgcgcgaag
     2581 cgttgcggcg gggcgaggtg gattttttgt tcggcgacgg ctttgcgttg tcgttctggc
     2641 ttaatggcgc gagttccggc ggctgctgcg tctttgcggg tgggccgttt gttgaaagcc
     2701 gttatttcgg cgaaggtatc ggggtcgcag tcaagcgcgg caatagcacg ttgcgtctag
     2761 ccatcaactg ggcgctgttc cgtatctggg agaccggccg attcactgat ctttggctgc
     2821 ggtatttccc gatcagcccg ttttgacggc ccggcctaaa taggacaaaa ccggcacgac
     2881 cggagaacgg aatgtcgact gccatgatcg cccccgatgt tgcgggcttg cgcgcccttg
     2941 cggagcaatc gaacgcctgg ccgttcgagg aagcccgcaa gatcgtcgcg cggctcaagc
     3001 atcaccccaa ggacgaggtg atcttcgcga ccggttatgg cccctcgggc ctgccgcata
     3061 tcggcacatt cggagaggtc gcccgcacca cgatggtgcg tcatgcgttc cgggttctca
     3121 cggaagacaa ggtgcacacc cgtctggtcg cgttttcgga cgacatggat ggcttgcgaa
     3181 aggtcccgga caatgttccg aaccgggaga tgctcgccgc ccatctgggc aagccactga
     3241 cacggattcc ggacccgttt tcgaacgatc atccttcctt cggcgccgct aataatgctc
     3301 gcctgcgcgc gtttctcgat cgctttggct tcgactacga gtttgccagc gccaccgact
     3361 actatgcggc cggtcgtttc gacgccacgc tcctgagaat gctcgccgcc tacgaccagg
     3421 tgatggctat cattctcccg acgctcggac cggagcggcg caccacctat tcgccgtttc
     3481 taccgatctc gcccgcgagc gggaaggtgc tgcaggtgcc gatgatcgca cacgacgttg
     3541 cgcgcggcac catcacctac gtcgaaccgg acaccggcga aacgatcgag accccggtca
     3601 ccggcggtcg catcaagtgc cagtggaagg ccgattgggc gatgcgctgg gtggcgctcg
     3661 gcatcgacta cgagatggcc ggcaaggacc tcatcgattc cgtcaagctt tcgggcgaaa
     3721 tctgccgggc gctgggcggc cggccgccgg agggcttcaa ttacgagcta ttcctcgacg
     3781 acaagggcca gaagatctcg aagtccaagg gcaatggcct caccatcgag gaatggctgc
     3841 gctatgcgag cccggaaagc ctgtcgctgt tcatgtatcg cgagccgaag gcagcgaagc
     3901 ggctgtattt cgacgtcatt ccgcgccatg tcgacgagta tcagcagttc ttggagggct
     3961 atgaaaggca ggacgccaag cagcggctca ccaatccggt ttggcatatc cacgccggcg
     4021 atccgccccg tcccgacgtg ccgatctcgt tcaccatgct gctccgcctc gtgtcggcat
     4081 cgaacgcgga gaatgccgac acgctgtggg gtttcatcgg ccgctactgg cccggcatga
     4141 cgccgcagag cgctccgagg ctcaaccagc atgtcgagca cgccatccac tatttccgcg
     4201 acttcgtgct gccggccaag aaatttcgcg ttgcgaccga caccgaacgc gccgcgctca
     4261 tggacctgcg cgacgcgcta tcgcaactgc cacccgacag caccgcggaa aaaatccaga
     4321 cggtggtgta cgaaattggc cgccgaccgc cgtttctcgg aaagatcaac actaaagacg
     4381 gcagacccgg cgtgtcgctt gactggttta acatgctcta ccaggtgctg ctcggtgagg
     4441 aaaagggacc gcgcttcggc tcgttcgtgg cggtttacgg gctcggtaac accatcgaca
     4501 tgatcgacgg ggcgctgacg cggtcagcat aaccggcgag gccggtaaac atccacgccc
     4561 tcacgctgag gagcgcgctc ttgcgcgcgt ctcgaggtct ttgccgggca tacatccttc
     4621 gagacgcccg cctacgaggg cgggctgtca agatgaggtc ggtgcaagga caatcactgg
     4681 ctcgcccaca cgatacgggc gacccacagc acatcttcgg ccgcaagcat gcggtcggca
     4741 tgcaccggat tgagcggctt gagctccagg gtcttggcgg tcttgcgctt gagttcctta
     4801 gccatcacct cgccgccctt ggtcttgacg acgacccggt ccccgcggcg gatcggcgcc
     4861 gccggcgaca ccacaatgat ggtgccgtca cgataggccg gaagcaacgt gtcgccggat
     4921 atctccagcg cataggcatg ggcgtcctca accgccggaa acggtatcgc gtcccaaccc
     4981 ttgccggcgg gaaagccgct gtcgtcgaaa tagccgctgg cgccagcttc ggcgagcccg
     5041 atgagcggca ccgcttctgt ggaggggcgc gcctggtcgg aaatcaaggc cacgaactga
     5101 tcgagcgtag cgccggtcgc ggcgagcgac tttgagaccg attcagtcga gggccatcgg
     5161 gcgcgtccgt cgggcgtgat gcgcttcgat ttgttgaacg tggtcgggtc gagacccgcc
     5221 cgtttggcaa gccccgacgc cgacagcttc gcccgcgcgg ccagccggtc tatggccatc
     5281 cagatttgcg cgtgcgtcaa catggtcggg ctcccacaag gtaaccgaca aatcccaccg
     5341 taccggcgca ggtgaagctt ccccggggat aggaattata acctgcgggc gatg
//
LOCUS       DATILV010000922         5256 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2270175, whole genome shotgun sequence.
ACCESSION   DATILV010000922 DATILV010000000
VERSION     DATILV010000922.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5256)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5256)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5256
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2270175"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            468..1277
                     /locus_tag="VLJ17_22200"
     CDS             468..1277
                     /locus_tag="VLJ17_22200"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: protein motif:HMM:NF014593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HSV25722.1"
                     /translation="MVAKITVPVLHQMKRDGKKIAGVVAWDYPMARIADRAGVDIVSV
                     GDSVGVNLWGHSNPLEVTMEEMLVVCKAVRRGVTRALVSCDFPFGPLQKGTDSAVHAA
                     VRLVKEAGADMVKLDGAADFPDTVRALVRAGIPVFAQFGITPQTALQYGIPYGAQSAP
                     GAQAPPEMTARLVEQARLLESAGAALLDFTNSGPVAGAAVAKAVAIPVIGGFGGGPWL
                     DGRVRLASTAIGYAEKWLDSKTETYANVAKISLDAFTALIADVRAGRQIKG"
     gene            1284..2147
                     /locus_tag="VLJ17_22205"
     CDS             1284..2147
                     /locus_tag="VLJ17_22205"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV25723.1"
                     /translation="MPTAIIDGITTRYEVIGSGPPLLMYAPGGFNATIETWRTQGVYT
                     KIKLLDHLPQKYMCIVFDRRECGQSGGRVERVTWAHYVAQGKGLLDHLGIARAHILGG
                     CMGCCPVVAFGVAHSEAVLSMVLFWPVGGAKYRIAGHQRFSEHLAFVQQHSLSAVVAL
                     VAKDGKPFGADPRGGPWASVIRDDRVFADAYAKQNIDAYKLIVTGMARTLFDRDTAPG
                     AEPEDLLRLDIPTLIVPGRDASHATSAARYLEECLPRADYWDVPIAGQTEETVPGRIV
                     EFLDAATAAAS"
     gene            complement(2148..3059)
                     /locus_tag="VLJ17_22210"
     CDS             complement(2148..3059)
                     /locus_tag="VLJ17_22210"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV25724.1"
                     /translation="MNIQKAKKPVVAVMNAVHDLPVLVARDKGFFKDEGLDLEFVTTP
                     GMAQITTSHIVKFDSIFDRPLDSVYNEGGIDQYRMCEWGIMKRAVEANAQHLRGRKIV
                     ALGASMSKFAIVVARDSEFYEPEMLKDKEIAVTPNNGSHFTTLKMMEGFLAPEHVKTT
                     HAGSMKKRLEAVHHGKVAAASVMEPWISVAQKQGLRILIESHSTRSEAAGDDLDGPTL
                     ARMFRAQARAVALIEKDPTPFVHYFIAETGGLLEPHEFQAWRLLHAAPQPYTRERFDD
                     TYNWTVKWNMTVPGATYENTVDNRAWE"
     gene            complement(3087..3653)
                     /locus_tag="VLJ17_22215"
     CDS             complement(3087..3653)
                     /locus_tag="VLJ17_22215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25725.1"
                     /translation="MHSKVFGGTSVLPLNLGCGHLVSDADDGVMPSMTEHTGASAQSL
                     TGIWQGTYTYPLGLGSVSFVATLIEAGNSLTGTTHEQGGVDCGLNATLYASLSGSRRG
                     TAVVFVKTYDGSNPNYRTVEYKGTLSDDETEIEGHWIISSMWSGKFVMIRPARKAESV
                     FSKVCIARRANAGDQAVDSQNVPADHCP"
     gene            complement(3748..4692)
                     /locus_tag="VLJ17_22220"
     CDS             complement(3748..4692)
                     /locus_tag="VLJ17_22220"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV25726.1"
                     /translation="MAELKLKTVTRTQGNNQALKDGTVRPRTFAFDFVEVPVLIDGFR
                     RMVRGNEFDICEMAITTYICAKAHGKPMTAVPVFLVRAFHHGAILVNTRAGIRTPKDL
                     EGRKVGVNRGYTVTTGLWARSILQDEHGVDLSKITWVLSGDEHVAEYRPPTNVVPIDP
                     GHKMADMLVTGALAAAIGVEVDHPDVKPLIPDAAEAGLAALRGRGHYPINHTVVIRDG
                     LLAAHGELAPDVFNAFAAAKRFYVGRLKVGGIEKPTAVDEVHRRVMEITGDPLPYGIA
                     PNRQVLEELIRHGLTQGIVTKPVTVEELFPPNTHALVA"
     gene            complement(4720..4842)
                     /locus_tag="VLJ17_22225"
     CDS             complement(4720..4842)
                     /locus_tag="VLJ17_22225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25727.1"
                     /translation="MIVEFLGDGYFGDNVPLEALSKMVELQLDFGIECFSVPQS"
BASE COUNT         1008 a         1590 c         1582 g         1076 t
ORIGIN      
        1 ccagcgtagc gccgtgctcg gcaccgtcaa ggacaagccg cctgcggcgg tggccatcct
       61 tgacggtgcc tgcgcgcgac gctgcgcaaa tctcaggtcg ggacgaagga atgtcagtcg
      121 cgatcgaaca aaggaatgga acttagagaa ggagaacgag ggctttcggg gcggtctgac
      181 accaaccttc ccgaagcgag gtcccgacgc cgggacgatg gatcaggtca ggccgcattg
      241 cgccacgtgg catcacacca cgcgctccgt agattggccg gcctatcctc ttcaaacccc
      301 atcaggtggc ggcccctgcg ccgaccccgg acagaagcaa gaccccggcg aaaggattcc
      361 tcgcaagtgg agaagaggga ttgacaaacc aaggcccgtt acagaagccc ggatggagca
      421 taatccgggc tacgcaatcc ggggggctta acaagcgggg aagtataatg gtcgccaaga
      481 tcaccgttcc ggtgctgcac cagatgaaac gcgacggcaa aaaaatcgcc ggcgtggttg
      541 cctgggatta tcccatggcg cggatcgcgg atcgcgccgg ggtggacatc gtctctgtcg
      601 gcgattcggt cggtgtcaat ttgtggggtc attccaatcc gcttgaagtt accatggagg
      661 agatgctggt ggtgtgcaaa gcggtccgcc gcggcgtcac gcgtgctttg gtgagctgcg
      721 actttccatt cggcccgctc cagaagggaa ccgacagcgc agtgcatgcc gccgtccgcc
      781 tcgtcaagga ggcgggcgcc gacatggtca agctcgacgg cgccgcggat tttcccgata
      841 cggtgcgggc gctagtgcgc gctggcattc cggtatttgc ccaattcggg attacgccgc
      901 agaccgcgtt acaatatggc atcccctatg gcgcccagtc cgcgcccggc gcgcaggccc
      961 cgcccgagat gacggcgagg ctcgtcgaac aggcaaggct cctcgagtcg gccggcgccg
     1021 cgctgctcga cttcaccaat tcgggtcccg tcgcgggtgc cgcggtcgcc aaggcagttg
     1081 ccattccggt gatcggcggg ttcggcggcg ggccgtggct cgacgggcga gtgcggcttg
     1141 cctccaccgc catcggctac gccgagaaat ggctcgattc caagaccgag acgtatgcga
     1201 acgtcgccaa gatcagcctc gacgccttca cggccctgat cgcggacgtg cgcgccggcc
     1261 gtcaaatcaa gggctgagcg accgtgccaa ccgcaatcat tgacggaatc acgacgcgct
     1321 acgaagtcat cggctccggc ccgccgctgc tcatgtatgc gcccggaggc ttcaacgcga
     1381 ccatcgagac ctggcgcacg cagggcgttt acaccaagat caaactgctc gaccatttgc
     1441 cacagaaata catgtgcatc gtcttcgatc gccgcgagtg tggccagtcc ggcggccggg
     1501 ttgaacgggt gacctgggcg cactatgtgg cacagggcaa ggggctcctc gaccatttgg
     1561 gcatcgctcg cgcccacatc ttgggcggat gtatggggtg ctgtccggtc gtggcgtttg
     1621 gtgttgccca ttcggaagca gtgctgagca tggtgctgtt ctggccggta ggtggtgcca
     1681 aatatcggat cgccggccac cagcgcttta gcgaacacct ggccttcgtg cagcagcaca
     1741 gcctctccgc agtggtcgcg ctggtggcca aggacggcaa gccgttcggc gccgacccgc
     1801 ggggcgggcc ctgggcctcg gtgatccgcg atgaccgtgt ttttgcggat gcctacgcga
     1861 agcaaaacat cgatgcctac aagctgattg tcactggcat ggcgcgcacg ctgtttgacc
     1921 gcgacacagc ccccggagcc gaacccgaag atttgctccg cctcgacatt ccgacgctta
     1981 tcgtcccggg tcgcgacgcg tcgcacgcga cctcggcggc gcgttacctt gaggagtgcc
     2041 tgccgcgcgc ggattactgg gatgtgccaa tcgccgggca gacggaggag acggtgccgg
     2101 gacgaatcgt agaattcctt gacgccgcga ctgccgcagc ttcgtaacta ctcccaagcc
     2161 cgattatcaa cggtgttctc gtaagtggcg ccgggcaccg tcatgttcca cttgaccgtc
     2221 cagttgtagg tgtcgtcgaa ccgttcacgg gtgtagggct gcggcgcggc gtgaagcagg
     2281 cgccacgctt ggaattcgtg aggctccaga aggcccccgg tctcggcgat gaaatagtgg
     2341 acaaagggtg tcggatcctt ctcgatcaac gccaccgctc ttgcctgcgc acgaaacatc
     2401 ctcgccagcg tcggtccgtc aaggtcgtca cctgccgcct cgctgcgggt cgagtgcgac
     2461 tcgatcaata tccgcaggcc ctgtttctgc gccacgctga tccacggctc catgacgctc
     2521 gcggccgcga ccttgccgtg atgcaccgcc tccagccgct tcttcatcga gcctgcgtgg
     2581 gtcgtcttga cgtgctcagg cgccaaaaag ccttccatca ttttgagcgt ggtgaagtgg
     2641 gagccattat tcggtgtcac cgcgatttcc ttgtccttga gcatctcggg ctcgtagaac
     2701 tcggagtcgc gcgcaaccac aatggcgaat ttcgacatgg aggcgcccag cgccacgatt
     2761 ttccgtccgc gcaagtgctg ggcgttggcc tcgacagccc gcttcatgat cccccattcg
     2821 cacatgcggt actgatcgat gccgccttcg ttgtagactg aatcgagcgg gcgatcgaag
     2881 atggagtcga acttaacaat atgggaggtc gtgatctgcg ccattccggg cgtggtcacg
     2941 aactcaagat ccaggccttc gtccttgaaa aatcccttgt cgcgagcaac cagcaccggc
     3001 aggtcatgaa ccgcgttcat gacggcgacc accggcttct tggctttttg aatattcatg
     3061 atgtttcctc ccgtgatgca ccgggcttat gggcaatgat cggctggcac gttttgactg
     3121 tcaacggcct gatcacccgc gttcgcacgc cttgctatac acaccttgct aaatactgac
     3181 tcggccttcc gggccggtcg gatcatgaca aacttcccgg accacatact tgagatgatc
     3241 cagtgcccct cgatctcggt ttcatcgtca ctcaaggtgc ctttgtactc gacggttcga
     3301 taattggggt tgcttccatc ataggtcttc acaaagacga cagcggtgcc gcgtcggcta
     3361 cccgagagcg aagcgtacaa cgtagcattg agaccgcagt caacgccgcc ttgttcatgg
     3421 gtcgtgccag taagcgagtt tccggcttcg atcagcgttg ccacgaagga taccgacccc
     3481 aaaccaagag gataggtgta ggtcccctgc cagatgccgg tcagactttg cgcgctcgct
     3541 ccggtgtgtt cggtcatgga gggcataacc ccatcatcgg catccgatac caggtgacca
     3601 cagccaaggt tgagtggcaa caccgacgtt ccaccaaaca ccttcgagtg cattgcggat
     3661 tgtgcgatgc actgcaagcg aaggtgtccc agacagccac tagcgacgga gtaaacgcgt
     3721 aggcgcaaac gcgattttct cgatcggtca cgccacaaga gcatgagtat ttggcgggaa
     3781 cagctcttcc acggtgaccg gtttggtaac gataccctgt gtcaggccgt ggcgaatcag
     3841 ttcttcgagc acttgccgat ttggcgcaat gccgtacggc agcgggtcgc cagtgatttc
     3901 catgactcgg cggtggacct catcgaccgc agtcggcttt tcgatccctc cgaccttcag
     3961 gcgtccaaca tagaaacgtt tggccgccgc gaaggcgttg aacacgtcgg gagcaagctc
     4021 gccgtgggct gcaaggagtc cgtctcggat caccaccgtg tggttgatgg ggtaatgtcc
     4081 gcgtcctcgc agcgccgcta ggccggcctc cgcggcatcc ggaatgagcg gcttgacgtc
     4141 ggggtggtcc acctcaaccc caatggcggc cgccagcgcg cccgttacga gcatgtccgc
     4201 cattttgtgg ccggggtcga tcggcaccac attggtgggc gggcgatact cggccacgtg
     4261 ttcatcaccg gatagaaccc aagtgatctt gctgaggtcg acgccgtgtt cgtcctgcag
     4321 gatgcttcgc gcccacaggc cggtggtgac cgtatagcca cgattgaccc cgaccttgcg
     4381 tccttcgaga tccttcgggg tgcggatacc tgctctggtg ttgaccagaa tcgccccgtg
     4441 atgaaaggcg cgcaccagaa agaccggcac cgccgtcata ggctttccgt gcgccttggc
     4501 gcagatatac gtggtaattg ccatctcgca aatatcgaac tcattgcctc gtaccatgcg
     4561 gcggaagccg tcgatgagga ccggaacctc cacgaaatcg aacgcgaagg tcctcggcct
     4621 cacggtgccg tccttaaggg cctggttgtt gccctgggtg cgggtgacgg ttttcagttt
     4681 aagttcagcc atggggtgcc tacgagtgag cgtttagggt catgattgag gcaccgaaaa
     4741 gcattcaatg ccgaaatcca gttgcagctc gaccattttc gacagcgctt ctaatggcac
     4801 gttgtcgcca aagtagccgt ctccaagaaa ctcgacaatc attgtggcgc tgccccctct
     4861 ggagcgcaat cggtggagaa atttctttgt gaggcgcgag ctaccagtaa atcgattttg
     4921 tccgctaacc actgctctcc caattcatgg cagatggagt gtctgcactc gtgccagcat
     4981 attggccttg gcagagtgtt ccgttggttg tctttctttg atcaccgaca cggtgtgcta
     5041 cattcgcttc caatgccaat actgcggcga tatcggcagg agtcgtggtt gggtggataa
     5101 taaataattc aacatcgagc cgacgccgca tcccttcatc ggagttgact ttggcgtcca
     5161 caggcacttt gtgtattctc gattttttgg ttcggaccat tcaacagcaa tcgcactcga
     5221 acccttctgt gaccgcaagc gagtccttga gccaag
//
LOCUS       DATILV010000923         7918 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3040670, whole genome shotgun sequence.
ACCESSION   DATILV010000923 DATILV010000000
VERSION     DATILV010000923.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7918
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3040670"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..458)
                     /locus_tag="VLJ17_22230"
     CDS             complement(<1..458)
                     /locus_tag="VLJ17_22230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25728.1"
                     /translation="MKPATASSFKGVFAFFLLAGNLRPALISVGPLAETIRSKLGLSD
                     AAAGLLPTLPLPIFAGVSLFARFGGPFGIEKTLAWCLALIVAGIALRSQGSIAALFAG
                     ERVTKADEETQVKSYCLSRRFGTSCGQVPHRFEINANETGPLPQQSHSMNP"
     gene            complement(461..889)
                     /locus_tag="VLJ17_22235"
     CDS             complement(461..889)
                     /locus_tag="VLJ17_22235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HSV25729.1"
                     /translation="MIDLIAAPYGALLLRWSLGIMFIAHALLKWRVYTMTVAVATFRS
                     IGLPGWLAYVVTTVELIGGGCLVVGLAPRYVALLLVPLIVGTIITVHGKNGWPFSNKG
                     GGWEFPAFWAATLVVQFLLGDGAWTLLPSPSFSSLIAAMD"
     gene            complement(894..1478)
                     /locus_tag="VLJ17_22240"
     CDS             complement(894..1478)
                     /locus_tag="VLJ17_22240"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSV25730.1"
                     /translation="MRGIARFLSKPWTLAALAAAGTILVALHVPDPEISPALTQRQPD
                     PANGKHVAVLGDCAACHSAPGGKALAGEALFGEQVFAGNCANCRDWDGKGVQSPYAAL
                     LGSRTVNDPDATNLRAMVLAGSDAPLPIEHAFMPMFARGHSSDELAAVANFVNGYFGN
                     GTASVSAADIDKERKLLAVGNRTFFGTISGSDGR"
     gene            complement(1488..3695)
                     /locus_tag="VLJ17_22245"
     CDS             complement(1488..3695)
                     /locus_tag="VLJ17_22245"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSV25731.1"
                     /translation="MNMIDMTMISRRGFLEGVAGLTFALSIPTAVILRPAAALAEGGS
                     PASIGAWVTISPDGAIVVAAPAAEMGQGSLTGLAMIFAEELDADWSRVTTTYPPVIPS
                     VFGNPIFGGIMVTFGSGSVRGYWDKIRLQAAAARRVLMQAAADRWQVPLAELHTEPSL
                     VVHAASNRSMSYGEIASFARVPATMPTIDKAELKKTADYRILGKTTPRFDIPAKTTGA
                     AEFAIDVQVPNMVYATVLRSPVEEAVPEHVDDGAALAVPGVLKVVPLGHSVGVVAESV
                     EAAFAGRAALRVGWSKAPADNYSSVDGLKDFLARVGKLEDKGVSFFAVGDTDSAFAKA
                     AKVVSAQYTTQYVYHAQMEPMNVTATVSPGGDTAEIWIGTQGPSINTGAAAALLKTTP
                     DKIKLNQFHLGGGYGRRWPADTLPEVLPLAKLMQRPVKLIWTREQDVKSAKMRPMTAH
                     QVEAALDAAGKVIGWRHRVVAESIIAYVNGEKALEDAKGIDIQVLKHATHEYGIANQS
                     IVWLREKRGVGLCSWRGIGAGYHKFAIESFVDELAAAQKAEPVQFRLDLLKHEPRAHA
                     VIRAVAEKSGWGKPMPAGHALGFAYAEQDGTYHAAVGEISLDRKTGIIRVHRFWVVLD
                     PGIVVNPDSVLAQAEGSVIFGISGALKEEVSISAGQVQQNNFYDYPVLRMSEMPEIDI
                     QIIATDNPPGGVGESALPLVAPCVGNAVFRLTGRRLRALPFSPERIKKELPWT"
     gene            complement(3699..4157)
                     /locus_tag="VLJ17_22250"
     CDS             complement(3699..4157)
                     /locus_tag="VLJ17_22250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015242302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HSV25732.1"
                     /translation="MSFSFTVNGKLANIDVAPDTPLLWVLREHLKLTGTKYGCGAGMC
                     GACTVHLDGRAVRSCQTPIAAVTEKRVTTIEGLSANGDHPLQKAWVDLQVPQCGYCQS
                     GQIMQAAALLASKKDPSRDDIIRHMDGNICRCGTYPRILRAVERAAKRGA"
     gene            complement(4173..5366)
                     /locus_tag="VLJ17_22255"
     CDS             complement(4173..5366)
                     /locus_tag="VLJ17_22255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006202544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HSV25733.1"
                     /translation="MSEQAIRIGYCLSLTGPLASNGKTARLAHQIWENDVNQKGGLLG
                     RKVQMVCIDDETNPKLVPEIYKRLLDDEKVDLVIGGYGDNSVSPAMPLIIERNRYLVA
                     LMSLAVNASFGYANYFVMIPTGPSPSEALTEGFFSLAAKQSPKPQSMAILAADATFSK
                     SPVQGAKAHADRHGFKVVSDAKYPLSATDLAPFIRELKPINPDILFLCSYLNDSAGLL
                     RAVDEVGLEPKMVGGAMIGPQNGSIKAQLGPLLNGLVNYEYWLPVPKMMFPGVAQMIA
                     NYQSLAQDAGADPLGYYVAPQAYAQMQIVEQAITGTRSLDDAKLAQFTRESSFKTVVG
                     DIKFGKGGGWSEARVLQVQYQNIKKADLSEFKDARTQAVVWPSNLASGTLLYPYAEAK
                     RNIKA"
     gene            complement(5363..5710)
                     /locus_tag="VLJ17_22260"
     CDS             complement(5363..5710)
                     /locus_tag="VLJ17_22260"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HSV25734.1"
                     /translation="MPDADHRCGADEHTKYYVIFLHSIPERSLSPQVVDQHAAHLAEL
                     DDSGKLVMAGPLTERAGGLIVVRTASAAEAMAIAEEDPLVRGAYQTYELGTWLMSNRQ
                     NDYRPNIEQGSRK"
     gene            complement(5722..6189)
                     /locus_tag="VLJ17_22265"
     CDS             complement(5722..6189)
                     /locus_tag="VLJ17_22265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018857969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HSV25735.1"
                     /translation="MSAKTPEEVRNEQVIRSLYALAEGNAKDTSNFVSIFTDDGYFYD
                     VAADKKYFGRDIGVTVDVYAAAFPDMHREIYTLRSFGDHVLVELSLNGTHKGDLVIPA
                     GTIPPTGKVMRAPCCDVFRLKDGRVFSFHCYVAVPILLEQLGVFMNLQAALRH"
     gene            complement(6379..7299)
                     /locus_tag="VLJ17_22270"
     CDS             complement(6379..7299)
                     /locus_tag="VLJ17_22270"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HSV25736.1"
                     /translation="MESQARRVQLELQTHGARKYSTSGLLYSSAGLGWSTISAELRCH
                     GVSETPVIVPQHVELILAVVGNDEGRVIRTGAGQRTEARPSTGVFCLTPAGVDNQITI
                     EAPVPKTLHLYLPTAQFRKLADDFNLPGAPAHSIRYVAGVQDAVIYQIGLAIVSAMTN
                     ETAAGRMFVETASTTLAARLLQRYCDSGACKPLEPTTHRIDHARLRRALDHISANLDE
                     EITLSQLAQVAGVSVFHFARTFTRAMGVSPSRYVSRMRLEKAMAEIAAGKLSLVEIAL
                     RAGFSSQASFTRAFFRETGLTPGEYRTRRA"
     gene            7757..>7918
                     /locus_tag="VLJ17_22275"
     CDS             7757..>7918
                     /locus_tag="VLJ17_22275"
                     /inference="COORDINATES: protein motif:HMM:NF012354.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HSV25737.1"
                     /translation="MIPVRDLNNLYFFAKVVDFGSYTAAAKALGLQTSKLSRRIAGLE
                     TELGVRLINR"
BASE COUNT         1566 a         2393 c         2347 g         1612 t
ORIGIN      
        1 gggttcatgg agtgcgattg ttgcggaagc ggtcccgttt cgttggcatt gatctcgaag
       61 cgatgaggta cttgaccaca ggaggttccg aaccggcgtg aaagacagta gcttttgact
      121 tgcgtttcct cgtcagcctt ggtgacgcgt tcgcccgcga acagagcggc gatcgagccc
      181 tgcgaccgca gagctattcc ggcaacgatc agcgcgaggc accacgccag ggtcttttcg
      241 atcccgaacg gcccgccaaa acgcgcgaac agggagacgc ccgcaaagat cggcaaaggc
      301 agtgtcggca acagtcccgc cgccgcgtcc gacaggccga gcttcgatcg gatcgtctcg
      361 gcgagcgggc caacgctgat gagcgctgga cgaaggttcc ccgccagaag aaagaaggcg
      421 aacacgccct tgaaggatga tgcggtcgca ggcttcatga tcaatccatc gctgcaataa
      481 gagatgaaaa ggatggcgac ggcagcaggg tccacgcacc gtctccgagg aggaactgca
      541 ccacgagcgt tgccgcccaa aatgctggaa actcccagcc gccgcccttg ttgctgaatg
      601 gccagccatt tttgccgtga accgttatga tcgttcccac gatcagcggg acaagcagca
      661 aggcgacgta tctcggagcc aagcccacga ccaggcatcc accgccgatc agttcaacgg
      721 tagtgaccac atacgcgagc cacccgggca agccgatgga acgaaaagtg gcgacagcga
      781 ccgtcattgt atagacgcgc catttaagaa gcgcgtgcgc aatgaacatg atcccgagag
      841 accagcgaag cagtaacgcg ccataaggag cagcgatgag atcaatcatg gggttacctt
      901 ccgtctgatc cactgattgt tccaaaaaaa gtcctgttac ctactgccag caactttctt
      961 tccttgtcga tatctgcggc gctaacgctc gcggtcccgt tgccaaaata gccattgacg
     1021 aaattcgcca ccgcagcgag ttcgtcactc gaatgaccgc gtgcgaacat cggcatgaaa
     1081 gcatgctcta tcggcagagg cgcatcgctc cccgccaaca ccattgccct tagattggta
     1141 gcgtcgggat catttaccgt gcggctgcca agcaacgcgg catagggtga ttggacgccc
     1201 ttgccatccc aatcgcggca attggcgcaa ttgccggcaa acacctgctc gccgaatagc
     1261 gcttcgccgg caagcgcttt gccgccaggc gccgaatggc aggccgcgca gtcgcctaaa
     1321 accgcgacgt gcttaccgtt cgcgggatcc ggttggcgct gcgtaagtgc aggggagatc
     1381 tccgggtctg gaacgtggag ggcgaccagg attgtgccgg ccgctgccag cgcggcgagc
     1441 gtccatggct tgctcagaaa gcgagcgatt ccgcgcatat ccggcgccta cgtccagggc
     1501 aattcttttt tgatccgctc cggagagaac ggcaacgcac gcaagcgcct accggtcagc
     1561 cggaagacgg cgttgccgac gcagggcgca accagcggca gagcggactc acccaccccc
     1621 ccgggcgggt tgtccgtcgc aatgatctga atgtcgatct ccggcatttc cgacatgcgc
     1681 aacaccggat aatcgtagaa attgttctgc tgcacttggc cggcggaaat cgacacctct
     1741 tccttcagcg ccccgctgat gccaaagatc acactgccct cggcctgcgc cagcacactg
     1801 tcggggttga ctacgatgcc cgggtcgagc acgacccaga agcgatgcac gcgaatgatg
     1861 ccagtcttac ggtcgagcga gatttcgcct accgctgcat gataagtccc gtcctgttca
     1921 gcataggcga agcccagcgc atgcccggcg ggcatcggct tgccccagcc ggatttttcg
     1981 gccaccgctc ggatcaccgc gtgggctcgc ggctcgtgtt taagcaggtc gagccgaaat
     2041 tgaactggct ctgccttctg cgctgcagca agctcgtcga cgaatgattc aatggcgaat
     2101 ttgtggtaac ccgcaccgat gccgcgccac gagcacaagc cgacgccgcg tttctcgcgt
     2161 agccagacga tcgactggtt ggcaatgccg tactcgtgtg tcgcgtgttt gagcacctgg
     2221 atatcgatgc ccttggcatc ttccagcgcc ttctcgccat tgacataggc gattatggat
     2281 tcggcgacca cgcgatggcg ccagccgatc accttgccgg cggcatcaag cgccgcctcg
     2341 acctgatgtg ccgtcatcgg ccgcattttt gccgatttga catcctgttc gcgtgtccag
     2401 atcagcttca cgggccgttg catcaacttg gcgagcggaa gcacctccgg aagcgtgtct
     2461 gcgggccaac gccggccata gcctccgccg agatggaatt ggttgagctt aatcttgtcc
     2521 ggcgtggtct tgagcagcgc tgcggcagcg ccggtgttga tgctcgggcc ttgcgttcct
     2581 atccagattt ccgcggtgtc gccgcccggg ctgaccgtgg cggtgacgtt catcggctcc
     2641 atctgggcgt gataaacgta ttgcgtggtg tattgcgcgc tcactacctt tgccgctttg
     2701 gcgaaggcgc tgtcggtgtc gccaacagca aagaaactca ctcccttgtc ttcgagcttg
     2761 ccgacgcgag cgaggaaatc cttcaggcca tcgacgctgc tatagttgtc tgctggcgcc
     2821 ttggaccagc ctacccgcag cgcggcgcgc ccggcgaacg cggcctcgac gctctccgcc
     2881 acgacgccga ctgaatgtcc aagcggcacc accttcagca cgccgggcac ggcaagcgcc
     2941 gcgccatcat cgacgtgttc gggaaccgcc tcctcaaccg gagaccgcag aacggttgca
     3001 taaaccatgt tcggcacctg aacgtcgatg gcgaactcgg cggcgccagt agtcttggcc
     3061 ggtatgtcga agcgcggcgt ggttttgccg aggatgcggt aatcggcggt cttcttcagc
     3121 tccgccttgt cgatcgtggg catggtcgcc ggaacgcggg cgaaactcgc gatctcgccg
     3181 tagctcatgg agcggttgct ggcggcatgc accaccaggc tcggttcggt gtgaagttcg
     3241 gccagcggta cctgccaacg atcggcggcc gcttgcatca gcacgcggcg cgcagcagcc
     3301 gcctgcagcc ggattttgtc ccaatagccg cgcactgagc cgctgccaaa agtcaccatt
     3361 atgccgccga agatcgggtt gccgaaaacg ctcgggatga ccggcggata ggtagtcgtg
     3421 acccgcgacc aatcggcgtc cagttcctcg gcgaagatca tggccagacc agtgaggctg
     3481 ccctgaccca tctccgctgc cggcgcggcg acgacaatgg cgccgtccgg gctgatcgtg
     3541 acccacgcgc cgatcgaggc tggacttccg ccttcggcga gggccgcggc cgggcgcaag
     3601 atcacggcag tcggaatact taaggcgaaa gtcagtccgg cgactccttc aaggaacccg
     3661 cgccgtgaaa tcatggtcat atcgatcata ttcatggctc acgctccccg cttagcggcg
     3721 cgctcgacgg cgcggaggat gcgcggatag gtgccgcagc gacaaatatt cccgtccatg
     3781 tgacgaataa tgtcgtcgcg gctcggatcc ttcttgcttg cgagcagcgc agccgcctgc
     3841 atgatctgac cggactggca gtaaccgcat tgcggcacct gcaaatccac ccaggccttc
     3901 tgcaacggat ggtcgccatt ggccgagagg ccttcgatgg tggtaactct cttctccgtt
     3961 accgctgcga tcggcgtctg acaggagcgc acggcgcgac cgtccagatg cacggtacaa
     4021 gcgccgcaca tcccggcgcc gcaaccatat ttcgtgccgg taagtttgag gtgctcgcgc
     4081 agtacccaaa gcagcggtgt atctggcgcg acgtcaatat tcgccagctt gccgttgact
     4141 gtgaaactga aggacatgag gacctctcgg cgttacgctt tgatgtttcg tttcgcctct
     4201 gcgtacggat aaagaagcgt gcccgatgcg agattcgacg gccagacaac cgcttgcgtc
     4261 cttgcgtcct tgaactcaga cagatcggcc ttcttgatgt tctgatattg gacttgaagg
     4321 acgcgagcct cggaccagcc accgcctttt ccgaacttga tgtcgcccac cacggtctta
     4381 aacgagctct ctcgcgtaaa ctgtgcgagc tttgcgtcgt caagggacct ggtgccggtt
     4441 atcgcttgct cgacgatctg catctgggcg taggcctgcg gagcgacata gtagccaaga
     4501 ggatctgcgc ccgcgtcctg ggcgagtgac tgataattgg cgatcatctg cgcgacgccg
     4561 ggaaacatca ttttcgggac cggcagccaa tattcgtaat tgacaagccc gttcagaagc
     4621 ggaccaagct gcgccttgat cgagccgttc tgcgggccga tcatcgctcc gcccaccatc
     4681 ttcggctcga gtccgacctc gtcgaccgcg cgaaggaggc cggccgaatc gttcaagtag
     4741 gagcagagaa acagtatgtc tgggttgatc ggtttcagct cgcggatgaa cggagcaagg
     4801 tccgtcgccg agagcggata tttggcgtcc gagacgactt tgaaaccgtg tctatccgcg
     4861 tgcgccttgg cgccttgcac ggggctcttg gagaacgttg cgtccgcggc aagtatcgcc
     4921 atcgactgcg gcttcgggga ttgctttgcc gccaggctga agaagccttc ggtaagagcc
     4981 tcgctcgggc tggggccggt cgggatcatc acaaaatagt tggcgtagcc aaaagacgcg
     5041 ttcaccgcga gggacatcag cgcaacgaga tatcggtttc gctcgatgat gagcggcatg
     5101 gccggcgaga ccgaattgtc gccatacccg ccgatcacca gatcgacttt ttcatcgtcc
     5161 aacagccgct tgtagatttc gggcacaagc ttcggattgg tttcatcgtc gatacagacc
     5221 atctgaacct ttcgcccgag gagcccacct ttttgattga catcgttttc ccatatctga
     5281 tgggcgaggc gggcggtctt gccatttgaa gcaagcggtc cggttagtga gagacaatat
     5341 ccgatgcgaa tagcctgctc actcatttgc gggatccctg ctcgatgttg gggcgataat
     5401 cgttttggcg gttgctcatg agccaggtgc cgagctcgta ggtctggtat gcgccgcgca
     5461 ccaatgggtc ctcttcggcg atcgccatgg cttcggctgc gcttgcggtt cgcaccacga
     5521 tcagtccgcc cgcacgctcc gtcagtgggc ccgccatgac gagctttccg ctgtcatcga
     5581 gctctgccaa atgggccgcg tgctggtcga cgacttgtgg agacagcgag cgttcgggga
     5641 tcgaatggag aaatatcacg tagtacttgg tatgctcatc ggcaccgcaa cgatgatccg
     5701 cgtctggcat ggcaggcccc atcagtgtcg cagcgccgct tggagattca tgaacactcc
     5761 aagctgctcc agcagaatgg gaacggcgac gtagcagtga aacgagaaga ccctgccatc
     5821 cttcaggcgg aatacgtcgc agcaaggcgc gcgcatcacc ttgccggtgg gcgggatcgt
     5881 tcccgccggg ataacgaggt cgcctttgtg agtgccgttg agagaaagct ctaccaagac
     5941 gtggtcgccg aagctgcgga gagtgtaaat ttctctgtgc atgtccggaa atgcggccgc
     6001 gtatacatcg accgtcacgc cgatgtcgcg gccgaaatat tttttgtccg cggccacgtc
     6061 ataaaagtac ccgtcgtcgg tgaagataga cacgaagttg gatgtatctt tcgcgttgcc
     6121 ctcagccagc gcatagagcg agcggataac ctgttcgtta cgcacctctt cgggtgtctt
     6181 ggcgctcatg agataacctc cgcggtaagg ccctctgtga ggtctcggcc cgaggcccgt
     6241 cgatgcacgt ctgtttgacc agaggccaag tctagcggtc attgtggacg cggcgccgac
     6301 gcgggtcttt cccgcgattg ctattgtttt gagcgatctt gcgctctatc gcgtccgagt
     6361 gatttgcgcg gccgctcgct aagcccggcg tgtccggtat tctccaggcg tcaatccagt
     6421 ctcccgaaaa aatgcccgtg taaaacttgc ttgcgacgaa aagcccgctc tcaaggctat
     6481 ctctacaagg gacagtttgc cggccgctat ttccgccatc gccttctcca gacgcattcg
     6541 gctgacatag cggctgggtg aaacacccat tgcgcgggtg aacgtacgcg caaaatggaa
     6601 cacgctgacg cccgcgactt gagccaattg actcagcgtg atctcctcgt ccaggttagc
     6661 cgatatatga tccaaagcgc ggcgcaacct ggcatgatcg atgcgatgcg tcgtcggttc
     6721 caagggcttg caggcgccgc tgtcgcagta tctttgaagg agacgcgcgg ccagagtcgt
     6781 tgacgccgtt tccacgaaca tccgcccggc cgcggtctcg ttcgtcatcg ccgagacgat
     6841 cgctagtcct atttgataga tgaccgcgtc ctgcaccccg gcaacgtaac ggatggaatg
     6901 ggccggcgct cccggcagat taaagtcatc ggcgagtttt cggaattgcg cagtcggcaa
     6961 ataaagatgg agcgttttcg gaacaggagc ctcgatggta atctggttat cgacgccggc
     7021 cggcgtcaag cagaaaaccc cggtggacgg tctggcctcc gtgcgttgac cggctccggt
     7081 tcgaatgaca cgaccttcgt cgttaccaac gactgcgagg atcaactcaa cgtgttgcgg
     7141 aacaatcacc ggcgtttcac tgactccgtg acagcgcagt tccgcagaaa tcgtggacca
     7201 gccaagcccg gcggatgaat acaacaggcc ggacgtggaa tactttctcg ctccgtgcgt
     7261 ttgcagctcc aattgaactc tccttgcctg gctttccacc gtctccgatc gctcttcggt
     7321 gatgaaatca cgaaattgga tatctcaaga tgacggggac gatcgtgctc ttcgtgactt
     7381 gaatgccttg cgcatctcct cggcgaatag ctgcgtatgg attgcggaat tcgatcatgg
     7441 tcactcctct tcccgcatcg tgatgcgcgt gttcgggtct tggcgagggt cggcagtcgg
     7501 cactgccagc cctcggctga tcaccagcgt ctgcgcggtc cggatagcgc acccatcgcg
     7561 cgcatcatga gaactgcgtt gagcttgccg attgcgggaa cgagatgagc gagggcggtc
     7621 gaggtgccgg tacttcatct gtgcctctca cggccgccca tttgccccct caggcacata
     7681 ccaatgcaat gatcccctgg acagatcgag aaatggaatg catatttgtc gtgaatagaa
     7741 taattcggac taccgcatga tcccggttcg agacctcaac aacctctatt tcttcgccaa
     7801 agtggtcgat ttcggctcct acacggcggc cgcgaaagcg ttgggcttgc agacctcgaa
     7861 gctcagccgc cgcatcgctg ggctggagac cgagctcggc gtgcgcctga taaaccgc
//
LOCUS       DATILV010000924         3378 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4832331, whole genome shotgun sequence.
ACCESSION   DATILV010000924 DATILV010000000
VERSION     DATILV010000924.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3378)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3378)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3378
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4832331"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            109..1521
                     /gene="fumC"
                     /locus_tag="VLJ17_22280"
     CDS             109..1521
                     /gene="fumC"
                     /locus_tag="VLJ17_22280"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004333 - fumarate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HSV25738.1"
                     /translation="MTTMRKETDSLGVVEVPADKLWGSQTQRSLQHFSIGQDLIPREM
                     ITAYATLKKAAAIANHAGKRLDDERYKLIVQTCDEILAGKHHDMFPLHVWMTGSGTQF
                     NMNVNEVISNRCSQLAGTALGSHAPVHPNDHVNMAQSSNDSFPSAMCVAAAVNVKQRL
                     IPAAAALRDAINIKAKAWDDIVKIGRTHMQDATPLTLGQEWSGYVGMLSDNLERIEAA
                     LQGVYRLALGGTAVGTGINSAPDFAEAAAAQIAKLSGLPFVTAPNKFTVQGAHDALVQ
                     LSGTLRTLAVSLYKIANDIRLMSCGPRAGFAELEIPENEPGSSIMPGKVNPTQCEALT
                     MIAVQVMANDVAVGFGGAGGYLEMNVYKPLMIYNIMHSITIMTDGCTNFRTFLIEGAK
                     PNLKKINEYVERSLMLVTALSPVIGYDKASKIAHHAIDNDLTLKDAALKLGFISEAEF
                     DRIVDPKKMVKPCVAAADAA"
     gene            1527..3209
                     /locus_tag="VLJ17_22285"
     CDS             1527..3209
                     /locus_tag="VLJ17_22285"
                     /EC_number="1.1.1.38"
                     /inference="COORDINATES: protein motif:HMM:NF010052.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004470 - malic enzyme activity [Evidence
                     IEA];
                     GO_function: GO:0004471 - malate dehydrogenase
                     (decarboxylating) (NAD+) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent malic enzyme"
                     /protein_id="HSV25739.1"
                     /translation="MTSGAKQENDMTPNKHGMELLQDPSLNKSTAFTEAEKQSLGIVG
                     LVPDVTETMDVQLSRVMMQLGHKTTDLDRYIYLVNLLDHNETLFYRTIMSDPARFLPI
                     VYDPTIGEACLKFGHIYRQTRGMYLSMTRRGGVKEVLRNWPQKDVRFICVTNGGRILG
                     LGDLGANGAGIPIGKLQLYTACAGVPPQYLLPMYLDAGTNNEQYLHDPLYLGIRKTRP
                     PTEELYSFVDEFVDAVQEVFPKCCIHFEDWTGVDAVHLLQRYRDKYCVYNDDVQGTAG
                     ITLAGMINAAKIKGTNLKDEKYLFLGAGSAGIGLANLLCSALVAQGMTLKDAQSRVYM
                     FDVNGLLESTRTDLVDFQKPYAHKHAPTRDFVTAIESIKPTTIIGVSTVGGAFTQTVI
                     EAMSRINERPVVLALSNPTEKAECTPEQAYTWSKGKAIYAAGVQFPPVHLNGQTFLPG
                     QANNFYIFPAVGMAIFATQASRVTDEMFIEAAAGVADQVAPELLKQGLLYPLQANILE
                     TEIQTAARVAKLVFDSDLARVPRPADMVAFIRSHVYKPEYTELATAKAAQAA"
BASE COUNT          729 a         1014 c          972 g          663 t
ORIGIN      
        1 gatcgcgatc ggcctgatac gcgtcttcaa ccgcatcgcc catcggatga gggtgcgatc
       61 tcgcctcatc atgatatgcg atctttcgcg gcaagcagga gatgagtcat gactacgatg
      121 agaaaagaga ccgacagcct cggcgtcgtg gaagtgccag ctgacaagct gtggggttct
      181 caaacacaac gttccctcca gcatttcagc atcggccagg atcttattcc tcgcgagatg
      241 atcacggcct atgcgacgct gaagaaagcc gcggccatcg ccaaccatgc cggcaagcgg
      301 ctcgacgacg agcgttacaa attgatcgtt cagacctgcg acgaaatcct ggccgggaag
      361 caccacgaca tgtttccgct gcacgtctgg atgaccggca gcggcaccca gttcaacatg
      421 aacgtcaacg aagtgatctc caaccgctgc tcccaactcg ctggcacggc gcttggcagc
      481 cacgcgccgg ttcatccaaa cgatcacgtc aacatggcgc aatcgtcgaa cgattcgttc
      541 ccctccgcga tgtgcgttgc cgccgccgtc aacgtgaagc agcgcctcat tccggcggcg
      601 gctgcattgc gagatgccat taacatcaag gccaaagcgt gggacgacat cgtcaaaatc
      661 gggcgcactc acatgcagga cgccacgccg ttgacattgg gtcaggagtg gtccggctat
      721 gtcgggatgc tatcggacaa tctcgagcgg atcgaagctg cgctgcaggg ggtgtaccgt
      781 ctggcgctcg gtggtacagc cgtcggcacg ggtatcaatt cggcgcccga ctttgccgaa
      841 gcggcagccg ctcagatcgc gaaactgagc ggtctgccgt ttgtcaccgc accgaacaag
      901 tttaccgttc agggagccca cgacgcgctt gtgcagcttt ccggcacgct tcgcacgctg
      961 gcggtctcgc tctacaagat cgcgaatgac attcgcttga tgtcgtgcgg cccccgtgcc
     1021 ggcttcgccg agcttgagat tcccgagaac gagccggggt cttcgatcat gcccggcaag
     1081 gtcaacccga cccagtgcga agcgctcacc atgatcgccg tgcaggtgat ggccaacgac
     1141 gttgccgtag gtttcggcgg cgcaggcggc tacctggaaa tgaacgtcta caagcccttg
     1201 atgatctaca acatcatgca ctcgatcacg atcatgaccg acggctgcac caatttccga
     1261 acattcctaa tcgaaggcgc aaagccgaac cttaagaaga tcaacgaata tgtagagcgc
     1321 tcattgatgc tggtgaccgc gctttcaccg gtcatcggtt acgacaaggc gtcgaagatc
     1381 gcgcaccatg ccatagataa cgatctcact ctcaaggatg ccgccttgaa gctgggcttt
     1441 atcagtgagg cggaattcga ccgcattgtc gaccccaaga agatggtgaa gccctgcgtg
     1501 gcggctgccg acgcagcctg aaacctatca cgagcggagc caaacaggag aacgacatga
     1561 ctcccaacaa gcatggaatg gaactgcttc aggatccttc actcaataag tcaacggcat
     1621 tcaccgaggc ggaaaagcag tcgcttggaa tcgtcggcct cgtgccggac gttaccgaga
     1681 cgatggatgt gcaactgagc cgggtgatga tgcagctcgg tcataagacc acagacctcg
     1741 accgctacat ctatctcgtc aatctgctcg accataacga gacgctgttc tatcgcacca
     1801 tcatgtcgga tccggcgcgc tttctgccga tcgtttacga tcctacgatc ggagaggcct
     1861 gcttgaaatt cggccatatc tatcgccaga cgcgtggcat gtatctatcg atgacgcgcc
     1921 ggggcggcgt gaaagaagtc ttgagaaact ggccacagaa ggacgtccga ttcatttgcg
     1981 tcaccaacgg cggtcgtatt ttgggtctcg gggatctcgg ggccaatggc gcaggcatcc
     2041 caatcggcaa gctgcaactc tacaccgcct gcgccggagt gcccccgcaa tatctgcttc
     2101 ccatgtatct tgatgccggc accaacaacg agcagtattt gcacgatcct ctgtatttgg
     2161 gcatccgcaa gacacggccg ccgaccgagg agctctattc cttcgttgac gagttcgtcg
     2221 atgccgtgca ggaggtcttc ccgaaatgct gcatccattt cgaggattgg accggggtgg
     2281 acgctgtcca cctgcttcag cgctaccgcg acaagtactg tgtctataac gacgacgtac
     2341 agggcacggc ggggatcacg cttgccggca tgatcaacgc ggcgaagatc aagggaacga
     2401 accttaagga cgagaaatac ctgttcctcg gtgccggctc ggccggcatc ggtcttgcca
     2461 atctcctgtg ttccgcgctg gttgcgcagg ggatgacgct gaaagacgcg cagtcgcggg
     2521 tctacatgtt cgacgtcaat ggcctgcttg agtcgacgcg cactgatctc gtcgattttc
     2581 agaagccgta cgcgcacaag catgcgccga cgcgggactt cgtcactgcg atcgaaagca
     2641 tcaagccgac gacgatcatc ggtgtaagca cggtcggagg cgcattcacg cagacggtga
     2701 ttgaggccat gtcgcgcatc aacgagcgtc ccgtcgtgct tgcactgtca aacccaaccg
     2761 agaaagccga gtgcacgccc gagcaggcgt atacctggtc gaaaggcaag gcgatctatg
     2821 ccgccggcgt gcagtttccg ccggttcacc tcaacgggca aacattcctg ccggggcagg
     2881 ccaacaactt ctacatcttc ccggccgtcg gaatggcgat ctttgccacg caggcctcgc
     2941 gggtcactga tgaaatgttc atcgaggcgg cggccggcgt ggcggatcag gttgcgcccg
     3001 agttgctgaa gcaagggctc ctctatccgc tgcaggcgaa tatcctggaa acggaaattc
     3061 agactgcagc acgtgtggcc aagctggtct tcgactccga tcttgctcgt gtcccgcgtc
     3121 ctgccgatat ggtcgcgttc attcgtagcc atgtctacaa gccggaatac accgagcttg
     3181 cgacagcgaa agccgcgcaa gcggcgtaag taaatccgct gctcgacgag gtcttcgccg
     3241 ggtggcgcct cgccgcggct cgccggcgtc ataggcgccg agctatgggt ccaggctcgt
     3301 atagcgtaag cgcgcaccgg cttggaaata ttcttcagct ggcgctcgcc tcgacgcttc
     3361 gccaaggccg ttagatcg
//
LOCUS       DATILV010000925         5184 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4569243, whole genome shotgun sequence.
ACCESSION   DATILV010000925 DATILV010000000
VERSION     DATILV010000925.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5184
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4569243"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1179)
                     /locus_tag="VLJ17_22290"
     CDS             complement(<1..1179)
                     /locus_tag="VLJ17_22290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003590995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxide hydrolase"
                     /protein_id="HSV25740.1"
                     /translation="MSANSSLPTRRSVLATSAAAGAASLFPTHLAAADGASQQPNHGD
                     LQMATTKGDAIRPFSIHVAEESLIDLRRRINATNWPEQETVADQSQGVQLTTMRELAR
                     YWAREHDWRKCEAKLNALPQFITEIEGLDIHFIHVRSKHENALPLIVTHGWPGSIIEQ
                     LKIIEPLTNPTAHGASGSDAFDLVIPSLPGYGFSGKPTKPGWYPVSIARAWATLMQRL
                     GYTRYVAQGGDWGNAVTEQMALQQPPGLIGIHTNMPATVPADVSKALAVGATPPAGLS
                     PDEKHAWDQLDFFFKNGLGYAIEMNNRPQTLYALVDSPVGLAAWMCDHDARSQEMIAR
                     VFDGKTEGLTKDDVLDNVTLYWLTNTGISSGRLYWDTRQLPATGGFFDARGVKIPVAV
                     S"
     gene            complement(1860..2261)
                     /locus_tag="VLJ17_22295"
     CDS             complement(1860..2261)
                     /locus_tag="VLJ17_22295"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV25741.1"
                     /translation="MSRELLIAVIDDDESFRIALVESLCSLGYDAHGFASAEDFIGED
                     GEYGCVITDVHMPGMNGLDLSLLLTARGSKIPVIMITARAEPQLEVKAAAIGAVCLLR
                     KPFELNALIGCLKRALHGSQLTNPKRSADGP"
     gene            complement(2415..3044)
                     /locus_tag="VLJ17_22300"
     CDS             complement(2415..3044)
                     /locus_tag="VLJ17_22300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV25742.1"
                     /translation="MPVPTSETAVVHVVDDDESMRGALEGLFDTMGLETRTYAAARDF
                     LATNLADKPGCVVIDVRLPDMNGLEFQAQLTQMGVRLPVVVITGYGDISMSVRAMKRG
                     AVDFLSKPFRDQDMLDAVMAAIERDRQRRKIDDDVSQMEQRFGTLSPREQQVMLLVTA
                     GKMNKQVASDLGISEITTKIHRGAAMRKMGARTLADLVRMADIVKLKRP"
     gene            complement(3204..4742)
                     /locus_tag="VLJ17_22305"
     CDS             complement(3204..4742)
                     /locus_tag="VLJ17_22305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004109765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter"
                     /protein_id="HSV25743.1"
                     /translation="MQLNWGALTVFVLLFGFVTWLGFAAARWRRGDLDQLHEWGLNGR
                     RFGTVITWFLLGGDVYTAYTFIALPALAFGAGAIAFFAVPYTIIIYPLLFMVFPRMWH
                     VCQKNRYITAADFVRGRFGNRWLALAIALTGIVATMPHIALQLVGLQVAIGAMGFTGE
                     GWIGDIPLFVAFVILAAFTYSSGLRAPTSIAIVKDILIYTTAFAAVVIIPIQLGGWGH
                     IFATVPPAKLLLAVPQGQTTGAYGAYATLALGSALALFLYPHVMTGILSASSADAVRR
                     NAVLLPAYTFVLGLLTLLGFFAIAAGVDKMPAYAEGFRQFKNNFAVPALLLYSFPDWF
                     AGIALAAIGIGALVPAAIMSIANANLFSRNIYREFLRPNATDRQEAQTAKWVSLVVKT
                     GALLFIVFLPMQYSIQLQLLGVIWIIQTLPAVLIGLYSRWFDPWALLIGWATGTAAGT
                     YMSVSVDFAFAYPLWLLGWSFPGYTAVYTLVLNLVITVALTPLMKALTATRKYKTVSA
                     DHRA"
     gene            complement(4818..5024)
                     /locus_tag="VLJ17_22310"
     CDS             complement(4818..5024)
                     /locus_tag="VLJ17_22310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008967687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3311 domain-containing protein"
                     /protein_id="HSV25744.1"
                     /translation="MSKDRERIWSPWYLLLLVQLIPTLWVPFYNTVEPSWNGIPFFYW
                     FQMALIIISAALTAIVYYATTRTT"
BASE COUNT         1126 a         1496 c         1542 g         1020 t
ORIGIN      
        1 gctcaccgcg accgggatct tcacgcccct ggcgtcgaag aagcctccgg ttgcgggaag
       61 ctgccgggtg tcccagtaga ggcgccccga cgaaatcccg gtgttcgtca gccagtagag
      121 cgtgacgttg tcgagaacgt cgtccttcgt caggccctcc gtctttccgt cgaacacgcg
      181 tgcgatcatc tcttggctgc gcgcatcatg gtcgcacatc caggccgcga gaccgaccgg
      241 cgaatcgacg agggcgtaga gcgtctgcgg acggttattc atctcgatgg catagccgag
      301 cccgttcttg aagaagaagt cgagctgatc ccaggcgtgc ttctcgtcgg gcgaaagacc
      361 ggccggcggg gtcgcgccga cggcaagcgc tttggaaaca tcggccggaa ctgtggccgg
      421 catgttggtg tggatgccga tgagcccggg cggctgctgc aaagccattt gctccgtgac
      481 ggcgttaccc cagtcgccac cctgcgccac gtaccgcgtg tagccgaggc gttgcatcag
      541 cgtcgcccac gcacgggcga tgctaaccgg gtaccatccg ggcttcgtcg gctttcctga
      601 gaagccgtag cccggcagcg acgggatcac cagatcgaac gcgtccgatc cgctcgcgcc
      661 atgcgccgtg ggattggtta gcggttcgat gatcttcagc tgctcgatga tcgagccggg
      721 ccacccgtgt gtgacgatga gcggcaacgc gttctcatgt ttcgaacgaa cgtgaatgaa
      781 gtgaatgtcg agtccttcga tctcggtgat gaactgcggt agagcgttaa gtttcgcctc
      841 gcacttgcgc caatcgtgtt ccctcgccca atagcgcgcg agttctcgca tcgtcgtgag
      901 ctgcacgcct tgcgattgat ccgcgaccgt ttcctgctcg ggccagtttg tcgcattgat
      961 gcgccggcgg agatcgatga gcgactcctc cgcaacatgg atggagaagg ggcggattgc
     1021 atcgcctttg gtggtagcca tctgcaaatc tccgtggttc ggttgttggc tggcgccgtc
     1081 tgctgcggcc aagtgcgtgg gaaagaggct tgccgcaccg gctgcggctg aggttgccag
     1141 aacactgcgt cgggtcggta acgacgagtt cgcagacatg gccaggctcc ttggtttgat
     1201 gaggtggccg gcgaacgtgt cgcgccctgc ggccggcctt gcgattccaa tcggtgttcc
     1261 gcgcctgcac aggaaatcgg cgcgcgaggc gcgccaaact cttcagattg atttgctgag
     1321 cgaccagccc ccccgcgcgg tagcgaagac agtcgtcgac acggaggcgg caaggccgag
     1381 cgtgcccgca gttgccgtgg agccatgccg ggtgggcgat ggcgatttct cagacatgct
     1441 cgctctcctg gttgaaagga cggcgcaaat attcagaggt tttgcgagca agcgccattc
     1501 agctttggga cggtccggtc atatcaacgt atgaggcatt agtgctgcaa ttgcgcggct
     1561 cgcggccgca gcctgcatac ggacacgaaa tgaggtttat tttgcttatg attttcttgg
     1621 gcacttacga gcaaaacaga tgggaaatac ctagggagtc cggcgtaacg ttgatgcgga
     1681 tcggcgaatt gcgctgtctc gcaccgccgc gcccggatgc gcagtgccaa aggcacccgc
     1741 cgcaggcggc gtgattggta ttcctgctca cgatatcgca ccagccaatt ggcacaatat
     1801 cctaacaagg ataccacaga tcaacaggcg gggggtggaa ccgttgtgtc gtttcggctc
     1861 taaggaccgt ccgcggaccg cttagggttg gtcagctgcg atccatgtag agcccttttg
     1921 agacagccga tcagagcatt taattcgaac ggctttctga gcaaacaaac cgcaccgatg
     1981 gctgccgcct tgacttccag ctgcggctcg gcacgcgcag tgatcatgat gaccgggatc
     2041 ttggagccac gggcagtgag caacaagcta agatcaagcc cgttcatgcc gggcatgtga
     2101 acgtcagtga tgacacagcc gtattcccca tcctccccaa taaagtcctc tgccgatgca
     2161 aacccgtgtg cgtcgtatcc cagcgaacaa agcgattcaa caagcgctat tcggaatgat
     2221 tcgtcatcgt cgatgacagc gattaggagc tctcttgaca cacatcgtcc cttcctggat
     2281 gtgaccccag tcggcggagc gggggacggc aattcttgga ggcgatgggg gcgctacgaa
     2341 actatacacg agtgttatat ttgactatac ataagtgtta tacttaatct ttatgggagt
     2401 gctatattta agctttatgg gcgcttgagc ttaacgatat cggccattcg gacgaggtcc
     2461 gcgagggttc gggcccccat tttgcgcatg gcagccccgc ggtgaatttt cgtggtgatc
     2521 tcgcttattc cgagatcact ggcgacctgc ttgttcatct tgccggctgt aaccagcagc
     2581 atcacctgct gttcgcgggg ggacagcgtt ccaaaccgtt gttccatctg ggaaacatcg
     2641 tcgtcaattt tccgccgctg tcggtcgcgc tcgatggcgg ccatcacggc gtcgagcatg
     2701 tcttgatccc tgaatggctt ggaaagaaaa tccaccgcac cccgcttcat agcgcgaacc
     2761 gacatggaaa tatcgccata ccccgttatc actaccaccg gcagccgaac acccatctgc
     2821 gtcagctgcg cctggaattc gagcccgttc atgtcaggca agcggacgtc gataacgacg
     2881 catcctggtt tatctgcaag gttcgtggcg agaaaatcgc gcgccgccgc ataggtacgg
     2941 gtctccagcc ccatcgtgtc gaacaggccc tccaaggcgc cacgcatcga ctcatcatca
     3001 tcaaccacgt gcacaaccgc tgtctcgctc gtcgggactg gcatcgcagg gcacctatgc
     3061 gccaatatgc tccaaaacag ctgacggatg ttagcatggc agaaagcgtg atgtggatca
     3121 aaccaaggta tgagtcggct gtcccttggt gtagtggcgg cacgtcgctc tgtaagcccg
     3181 caatgcgagg tccgctcaag agttcaagcg cggtgatcgg ccgacaccgt cttgtatttt
     3241 cgcgtcgcgg tgagcgcttt catcaacggc gtcagtgcga ctgtgatgac caaattaagg
     3301 actaaagtgt aaacggctgt gtagcccggg aaactccatc caagtaacca cagtggatac
     3361 gcaaaggcga aatcgaccga gaccgacatg taggtcccgg cggccgtacc cgtcgcccat
     3421 ccgatcagaa gcgcccacgg atcgaaccac cgggagtaca gaccgatcag cactgcgggc
     3481 agggtctgga tgatccagat aacgcccagc aattgcagtt gaatagagta ttgcatcggt
     3541 aggaacacga tgaacaagag cgcgccggtc ttgaccacca gcgacaccca tttcgcggtc
     3601 tgagcttcct gtctgtcggt ggcgttgggg cgtaggaact cgcgatagat gttgcgggag
     3661 aacagattgg cattggcaat cgacatgatg gccgccggca ccagcgcccc gattccgatg
     3721 gccgcaagag cgatgccagc aaaccagtcc ggaaagctat acagcaatag cgccggcacc
     3781 gcgaaattat tcttgaattg acgaaaccct tccgcatagg ccggcatctt gtcgacgccc
     3841 gccgcgattg cgaagaagcc gaggagtgtc aacagaccga gtacaaacgt gtaggcggga
     3901 agcaagaccg cattgcggcg caccgcatcc gcactgctgg cgctgaggat ccccgtcata
     3961 acatgcggat acaggaacag cgcgagtgcc gaacccaagg ccagcgtcgc ataagccccg
     4021 taggcaccgg tggtttgccc ttgcggcact gcgagcagca gtttcgccgg tggaacggtc
     4081 gcaaagatat gtccccagcc gccgagctgg atcggaatga ttacaacggc cgcaaacgca
     4141 gtcgtgtaga tcaaaatgtc cttgacgatg gcaatcgatg ttggtgcccg caatccgctc
     4201 gaataggtga acgccgccag aataacgaag gctacgaaga gcggaatatc cccgatccag
     4261 ccttcgcccg taaagcccat cgcgccgatc gcaacctgaa ggccgacaag ttgaagcgcg
     4321 atgtgcggca tggtggccac gatgccggta agggcgatgg caagagcgag ccagcggttg
     4381 ccaaagcggc cgcgaacgaa gtctgccgcc gttatgtagc ggttcttttg acacacgtgc
     4441 cacatacgtg gaaacaccat gaaaagcagc gggtaaatga tgatggtgta gggaaccgca
     4501 aaaaacgcta tcgccccggc gccgaaggcc aacgccggaa gcgcgatgaa ggtgtaggcg
     4561 gtatagacat caccacctag caggaaccag gtaatgaccg taccgaaccg ccggccattg
     4621 aggccccact catgcagttg atcgagatcg ccgcgccgcc aacgggcagc ggcaaagccc
     4681 agccaggtga cgaagccgaa caacaaaacg aaaacggtga gagcacccca gttcagttgc
     4741 acggcacgct cctgttcagc tcgtatcgtg tcggctaccc tgccaatcga catcctttcg
     4801 tcacatcaag tgtcgcatca cgtggttcgc gtcgtcgcgt aatacacgat agcggtcagc
     4861 gcggcgctaa tgataatcag cgccatttga aaccaataga agaacgggat tccgttccag
     4921 gacggctcaa cggtgttgta aaacggtacc caaagcgtcg ggatcaattg aaccaacaat
     4981 aacaggtacc acgggctcca tatccgttct cggtccttgc tcatgatgtc ggcctccagg
     5041 acgcatggta gttttcgtcg ctgagatcgt ccagccagcc aacccggcgg acgggggatt
     5101 tgtctgtccg acatcgcggc aagccgtttg ggggcaaaag gtcagtcgat tgatgtacga
     5161 cggcgcgtcg ggacaacgaa ttcc
//
LOCUS       DATILV010000926         5035 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1251612, whole genome shotgun sequence.
ACCESSION   DATILV010000926 DATILV010000000
VERSION     DATILV010000926.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5035
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1251612"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1163
                     /locus_tag="VLJ17_22315"
     CDS             <1..1163
                     /locus_tag="VLJ17_22315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000028 - ribosomal small subunit assembly
                     [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HSV25745.1"
                     /translation="LEETRAEQRQELVQNLEEGQVIDGVVKNITDYGAFVDLGGIDGL
                     LHVTDIAWRRVNHPSEVLNIGQQVKVKIVKINHDTHRISLGMKQLQADPWQGIEAKFP
                     INGRLTGRVTNITDYGAFVELEPGIEGLIHVSEMSWTKKNVHPGKIVSTSQEVEVQVL
                     EVDPVKRRISLGLKQTMRNPWEVFVEKYPPGSVVEGEVKNKTEFGLFLGLDGDVDGMV
                     HLSDLDWKRPGEQVIDDFKKGDKVRAQVLDVDIEKERISLGVKQLEGDPFAEASDVKK
                     GAVVTCEIIEVKESGLEVKLVGTDLTAFIKRSELARDRSEQRTERFAVGEKVDARVTQ
                     FDRRAHKVTVSIKALEVAEEKEAIAQYGSSDSGATLGDILGTALKRATEKKD"
     gene            1290..2276
                     /gene="sppA"
                     /locus_tag="VLJ17_22320"
     CDS             1290..2276
                     /gene="sppA"
                     /locus_tag="VLJ17_22320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011923366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HSV25746.1"
                     /translation="MSLETDHIVDRRRLRRKLTFWRVAAVLIAILGVVSAAVVARRSD
                     SSLTQPLTPQISRVTIQGIIRGDHERTEALDNLARSRNTRAVIVHIDSPGGTTAGSEE
                     LHQALRRVAAKKPTVVVIDGMAASGGYMAAMAADHIIAQNSSLVGSIGVLFQYPNLTD
                     LLTKVGVKVEEIKSSPLKAAPNGLEPTTPEARAAVEALVVDSYAWFKDIVRDRRKLEG
                     EALDRVADGRVFTGRQAISLKLADEIGREQEAIDWLAKSNNIDPKTPVRDWRLYPRFS
                     QLSLLHLGIAKAVDIWGFGPLARDLETSGALQAVEKLNLDGLLMLWHPPAGN"
     gene            2362..2649
                     /locus_tag="VLJ17_22325"
     CDS             2362..2649
                     /locus_tag="VLJ17_22325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008539997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HSV25747.1"
                     /translation="MIKSELVQRISGQNPHLYQRDVENIVNAILGEIVAALARGDRVE
                     LRGFGAFSVKNRPARAGRNPRTGAHVAVDQKSVPFFKTGKEMRERLNRAQP"
     gene            2752..2991
                     /locus_tag="VLJ17_22330"
     CDS             2752..2991
                     /locus_tag="VLJ17_22330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25748.1"
                     /translation="MLRKTLRSIVIILAFAVLVALAVANHQPVTVSFDPFDPSDSDFA
                     MAVPLYLVGFALLIAGVILGGVAVRLKPGKWRRTG"
     gene            2993..3676
                     /locus_tag="VLJ17_22335"
     CDS             2993..3676
                     /locus_tag="VLJ17_22335"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004640 - phosphoribosylanthranilate
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HSV25749.1"
                     /translation="MRLDIKICGLRTPEALDVSLHAGADMVGFVFFPPSPRHIDFAAA
                     RELGARVKGRALKVALSVDADDEWLAASVEALAPNLLQLHGKETPKRVLAVKARFRLP
                     VMKAIAVETRDDLACVPDYAEVADRLIFDARAPRDATRPGGLGQPFEWRLLKNLDPRV
                     PFMLSGGLNRDNVAEAIEVTGAGGVDVSSGVESVPGEKSPDLIRGFVRTARGTLDGKR
                     GRSATNSKP"
     gene            3673..4890
                     /gene="trpB"
                     /locus_tag="VLJ17_22340"
     CDS             3673..4890
                     /gene="trpB"
                     /locus_tag="VLJ17_22340"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011470875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HSV25750.1"
                     /translation="MNVQQPNSFRTGPDERGHFGIYGGRFVAETLMPLILDLERAYAD
                     AKADPKFLSEMDGHLTAYVGRPSPLYFAQRLTERCGGAKIYFKREELNHTGAHKVNNV
                     LGQIMLALRMGKTRIIAETGAGMHGVATATLCAKFGLPCIVYMGAVDVERQKPNVLRM
                     EMLGAEVRAVESGSRTLKDAMNEALRDWVTNVDATFYCIGTVAGPHPYPAMVRDFQSI
                     IGRETREQMQAAEGRLPDSLIACIGGGSNAMGLFYPFLDDPSIEIYGVEAAGLGIASG
                     KHAASIAGGRPGVLHGNRTYLLMNDDGQIEEAHSISAGLDYPGIGPEHAWLNDVGRVK
                     FLSATDDEAVAAFQLCSKLEGIIPALEPAHALARVLDLAPCKPRDHLMVVNLSGRGDK
                     DLATVAEYLQRHA"
     gene            4887..>5035
                     /locus_tag="VLJ17_22345"
     CDS             4887..>5035
                     /locus_tag="VLJ17_22345"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HSV25751.1"
                     /translation="MTLIDTRFAAFKREGRAGLVTFVMGGDPDPVTSVAIIKALPRAG
                     ADVIE"
BASE COUNT          997 a         1511 c         1561 g          966 t
ORIGIN      
        1 tgctggagga gacccgcgcc gagcagcgcc aggagctggt acagaacctc gaagagggtc
       61 aggtcatcga cggcgtggtc aagaacatca ccgattacgg cgccttcgtg gacctcggtg
      121 gcatcgacgg tctcctgcac gtcaccgaca tcgcgtggcg acgggtcaat catccatcag
      181 aggttctcaa catcggccag caggtgaagg tcaagatcgt caagatcaac catgacaccc
      241 accgcatctc gctgggcatg aagcagctcc aggccgatcc gtggcaaggc atcgaggcca
      301 agttcccgat caacggccgt ctcaccggcc gcgtcaccaa catcacggac tatggtgcct
      361 tcgtagaact tgagcccggc atcgagggcc tcatccacgt atccgaaatg tcgtggacca
      421 agaaaaacgt ccatccgggg aagatcgttt cgacctccca agaggtcgag gttcaggtgt
      481 tggaggtcga tcccgtcaag cggcgcatct cgctcggtct caagcagacc atgcgtaacc
      541 cgtgggaggt attcgtcgaa aaatatccgc ccggcagcgt ggtcgaaggc gaggtcaaga
      601 acaagaccga gttcggcctg ttcctcgggc tcgacggtga tgtcgacgga atggtccatc
      661 tctccgatct cgactggaaa cgtccaggtg agcaggtcat cgacgacttc aagaagggcg
      721 acaaggtgcg cgcccaggtg ctcgacgtgg acatcgagaa ggagcgcatt tcgctcggcg
      781 tcaagcagct cgaaggcgat ccgttcgcgg aggccagcga cgtcaagaag ggtgccgtgg
      841 taacgtgcga gatcatcgag gtgaaggaat ccggtctcga agtgaagttg gtcgggaccg
      901 atctcaccgc cttcatcaag cgctccgagc tggcccgcga ccgttccgag cagcgcaccg
      961 agcggttcgc tgtcggggag aaggtcgacg ctcgcgttac acagttcgat cgtcgtgccc
     1021 acaaggtgac ggtgtcgatc aaggcgctcg aagtcgccga agagaaggaa gcgatcgccc
     1081 agtacggctc ctccgattcc ggcgcgacgc tcggcgatat tctgggcacg gcgctcaaac
     1141 gggccaccga gaagaaagac tgacaatccc gtgattggag ggtttacacc ccgttaacga
     1201 aatcccgccc cgggaggtgc ttccggggcg gttttgccat aattgcgatc ggtgccccca
     1261 ccgccgttga aacaatccgg agcaattcca tgtcgctcga aactgatcat atcgttgatc
     1321 gccgccgctt gcggcgcaaa ctgaccttct ggcgcgttgc ggccgtcctg attgcgatcc
     1381 ttggcgtggt cagcgctgct gtcgtggcac gccgttccga ctcatcactc acccaaccgc
     1441 tgaccccgca gatttcgcgt gtcacgatcc agggcatcat ccgcggcgat cacgaacgca
     1501 ccgaggcgct cgataatctg gcacgctcgc gcaacacgcg cgccgtgatc gtgcacatcg
     1561 acagtcccgg aggcaccacc gcgggatcgg aggaactcca ccaggcattg cgccgggttg
     1621 cggcaaagaa accgaccgtg gtggttatcg acggcatggc cgcctcgggc ggctacatgg
     1681 cggccatggc agcggatcac atcatcgccc aaaactcctc gctggttggc tcgatcggcg
     1741 tactgttcca gtatccgaat ctcaccgatc tgctcaccaa ggtcggcgtc aaggttgagg
     1801 aaatcaaatc ctcccccctt aaggccgctc ccaatggcct tgagcccacg accccggagg
     1861 cacgggccgc cgttgaggca ttggtggtcg actcctacgc gtggttcaag gatatcgtca
     1921 gagaccgccg caaactggaa ggtgaggcgc tggatcgggt tgcagatggc cgcgtcttca
     1981 ccggccggca ggccatctcg cttaagctcg ccgacgagat cggtcgcgag caagaggcga
     2041 ttgattggct ggccaagtca aacaatatag accccaagac gccggtgcgc gactggcggc
     2101 tgtatcctcg cttcagccaa ctctcgctcc ttcatctcgg tatcgccaag gcagtcgata
     2161 tttgggggtt cggcccgttg gcacgcgacc ttgaaacgtc gggcgccctc caggctgtcg
     2221 aaaagctcaa tcttgacggc ttgttgatgc tttggcaccc tccggccggc aattaacctg
     2281 attggggtcg agggccggct gcggggtgag gcttgtgcgt agcctgcacc gagtatcctt
     2341 tttgagaaac ggcgtcgcca catgatcaag tcagaactcg tccaacgcat ttccgggcag
     2401 aatccccacc tttaccagcg cgacgtggaa aatatcgtca acgcgatcct cggtgagatc
     2461 gtggcggcgc tggcccgggg agaccgcgtt gaattgcgcg gcttcggggc tttttcagtt
     2521 aagaaccgcc cagcccgtgc gggccgaaac ccgcgaaccg gcgcccatgt ggcggttgac
     2581 cagaaatcgg tgcctttttt caagactggc aaagaaatgc gagagcgcct caatcgggcg
     2641 caaccttgac gctccggtcc ggtggccgac cccacgagaa tcgcggcaaa tcattgccgc
     2701 gagggtgtgg taacacgcca cacacgcata aattgatcga gcacaggtca tatgcttcgc
     2761 aagaccctaa gatcaatcgt cataattctg gctttcgctg tgctggtggc tttggcggtt
     2821 gccaatcatc aacccgtcac cgtgtcattt gacccgttcg atccatccga ttcggacttt
     2881 gcgatggctg tgccgctcta tcttgtagga tttgcgcttc tcatcgccgg tgtgattctc
     2941 ggcggtgtcg cggtccggct caagccgggt aagtggcgta ggaccggttg aaatgcgcct
     3001 tgatatcaag atttgcggtc tgcggacccc ggaggcgctc gacgtctcgc tgcacgcagg
     3061 cgccgacatg gtcgggttcg tgttctttcc gccgtcgcca cgccatatcg atttcgctgc
     3121 cgcacgggaa ttgggcgccc gggtaaaggg gcgggccctg aaggtggcgc tgtccgttga
     3181 cgccgacgac gaatggctgg cagcaagcgt tgaggcactt gcgccgaact tgcttcagct
     3241 tcacggtaag gaaacgccca aacgcgtgct tgccgtgaag gcacgtttcc gattaccagt
     3301 catgaaagcg attgcggtcg aaacccggga cgatctcgca tgcgtgcccg actatgccga
     3361 ggtcgcagat cggcttattt tcgatgcgcg ggcgccgcgc gacgcaacgc gcccgggcgg
     3421 ccttggccaa ccgttcgaat ggcggctcct gaagaacctt gacccgcgcg tcccgttcat
     3481 gctttcaggc gggcttaatc gcgacaatgt ggccgaagcg atcgaagtaa ccggagccgg
     3541 cggcgtcgac gtttcctctg gcgtcgagag cgtgccgggg gaaaaaagcc ccgacctcat
     3601 tcgcggcttc gtccgcacgg cgcgtggaac gctagacggc aagcgcggca ggtcagcgac
     3661 gaactccaag ccatgaacgt gcagcagccc aattcgtttc gcaccggccc tgacgagcgt
     3721 ggtcacttcg gcatttatgg cggccgattt gtggccgaga cgctgatgcc gctgatcctc
     3781 gacctggagc gggcctacgc ggacgccaag gcggatccaa agtttctgag cgaaatggac
     3841 ggacatctta cggcttatgt gggccgtccg tcgccgctct attttgctca gcgcctgacc
     3901 gaacgctgcg gcggcgccaa aatctatttc aagcgcgagg aactcaatca caccggcgcc
     3961 cacaaggtga ataatgtgct cggccagatc atgttggcgc tgcgcatggg taagactcgt
     4021 atcatcgcgg agaccggtgc cggcatgcac ggggtcgcga ccgctacgct atgcgccaaa
     4081 tttgggctgc cctgcatcgt ctacatgggc gcggtggatg tcgaacgaca gaagccgaat
     4141 gtattgagga tggagatgct cggggcggag gttcgcgctg tcgaatcggg ctcgaggaca
     4201 ctgaaagacg ccatgaacga ggcgttgcgc gattgggtga ccaatgtcga cgctactttc
     4261 tactgcatcg gtacggtcgc aggcccgcat ccctatcccg ccatggtgcg tgatttccaa
     4321 tctatcatcg gccgcgaaac gcgtgagcaa atgcaggccg ctgaaggccg cttgccggat
     4381 tctctgatcg cttgcatagg cggcggttcc aatgcaatgg ggctgtttta tccattcctc
     4441 gacgacccct cgatcgaaat ctacggcgtg gaggcggcgg ggctcggtat tgcgagcggc
     4501 aagcacgcag cctccattgc gggtggtaga ccgggcgtgc tgcatggcaa ccgcacctac
     4561 ttgctgatga acgacgacgg ccagatcgag gaggcgcatt cgatttcggc cggcctcgat
     4621 tatccgggaa ttggtcctga acatgcctgg ctcaacgacg tggggcgggt gaaattcctc
     4681 tcggcgacgg acgacgaagc cgtggcggcc tttcagctct gcagcaaact cgaaggcatc
     4741 attccggcgc tggagccggc gcatgcgctg gcgcgggtgc tggaccttgc gccgtgcaag
     4801 cccagagatc acctgatggt ggtgaacttg tccggacgcg gcgataagga cttggcaacc
     4861 gtcgccgaat atttgcagcg ccacgcatga ccctcatcga cacccgcttt gccgcattca
     4921 aacgtgaagg ccgcgccggg cttgtcacgt tcgtgatggg aggcgatccg gatcccgtga
     4981 catcggtcgc gatcatcaag gcgctaccgc gggccggcgc cgacgtgatc gaaat
//
LOCUS       DATILV010000927         2502 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1509270, whole genome shotgun sequence.
ACCESSION   DATILV010000927 DATILV010000000
VERSION     DATILV010000927.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2502
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1509270"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            145..2385
                     /locus_tag="VLJ17_22350"
     CDS             145..2385
                     /locus_tag="VLJ17_22350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HSV25752.1"
                     /translation="MTIKQALFAGTALGFAMLALSAPIAARAQPAEAAPAIDADDIGG
                     IVTSRMGPEAGVWVVAETTELGTRFAKMAVTDERGRFVVPDLPKATYRVWVRGYGLVD
                     SPKVTTEPGKTLNLTAEIAPNLAAAAQYYPAMYWASMIRVPDRNKFPGTGADGNGIPV
                     NFKTHDLWLNTVKTNGCGNCHQVGNYATRNIPEALGHFDSSIAAWARRLQSGPAGRDM
                     VRFMAGLMTPDGGHLAALADWTDRIKAGEIPSATPPRPLGVERNIVVTVRDWSDPKHY
                     LHDLTLTDRRQPTVNGHGLIYGAAELSTDYMPVLDPVKNTKTTIKVPVVDPKYAPSSA
                     LNNQVLAPSPYFGMEQVWDTQVNAHNPMMDQDGRVYLTAQIRSPKDPPEYCKKDSPLR
                     SAQLYPLAGPQTGFVQNSRQVTIWDPNTKKFSHIDTCFGTHHLNFAEDANNTLWLSNN
                     TQGERAVVGWINTKLYWETGDPVKSQGWTAMIVDTNGNGKRDEGYNEPGKPVDSSKDT
                     RIPFAMYGIAYSPADGSIWGSNLTHPGYILRVAPGSNPPETALAEIYRIPLPGFGIRG
                     SDIDRNGVVWMPLDSGHIASFDRRKCKGPLNGPGAELGDKCPEGFAFYPIPGPGFQGD
                     PGAEENPYYTWVDQHNIFGLGANVPLATGNQSDSLHALVDGRVIELRVPYPMGFFAKG
                     LDGRIDDPNAGWKGRGLWATSGNRTPMHIEGIDAPAPGAPGKTTATLSSPLVVHFQLR
                     PDPLAH"
BASE COUNT          507 a          835 c          758 g          402 t
ORIGIN      
        1 tccaagtgca tcaaactaac gccggactat aatagcgacg aaaggcatgc gcgcgacgcc
       61 cgatcgcggg aagtaaccgc gcgggcgaaa tcgatatctt gccggcggat gccagcgtgc
      121 gcaggaccac tgagggagac accaatgacg atcaaacagg cactattcgc cgggaccgcg
      181 cttggctttg cgatgctggc gttgagcgca ccgatcgcgg cgcgcgccca gccggccgaa
      241 gccgcccccg ccatcgatgc cgacgatatt ggcggtatcg tcaccagccg gatgggaccg
      301 gaagcgggcg tgtgggtcgt ggccgagaca accgaactcg ggacacggtt cgccaagatg
      361 gcggtgaccg acgaacgtgg ccgcttcgtg gtgccggact tgccgaaggc aacctaccgg
      421 gtgtgggtgc gcggctatgg cctcgtcgac tcgcccaagg tcaccaccga gcccggcaaa
      481 acgctcaatc tcactgccga gatcgcaccc aatctcgcag cggcggcaca atattatccg
      541 gcgatgtact gggcttccat gatccgggtg ccggaccgca acaagttccc tggcaccggc
      601 gccgacggta acggcattcc ggtcaacttc aagacccacg acctgtggct caacacggtc
      661 aagaccaatg gttgcggcaa ttgccaccaa gtcggcaatt atgccacgcg caacatcccg
      721 gaagcgttgg ggcacttcga ctcctcgatt gccgcctggg cgcgccgcct gcagtccggc
      781 cctgccggcc gcgatatggt gcgcttcatg gccggcctaa tgacacccga tggcggtcat
      841 ctggcagcgc tggccgactg gaccgaccgc atcaaggccg gggaaattcc aagcgcgacg
      901 ccgccgcgcc cgctcggggt cgaacgcaac atcgtggtca cggtgcgtga ctggtcggac
      961 cccaagcatt atctccatga cctcacgctt accgaccggc gccagccgac cgtgaacggc
     1021 cacgggctga tctacggcgc ggccgaactc tccaccgatt acatgccggt gctcgatcct
     1081 gtgaagaaca ccaagaccac catcaaggtg ccggtggtcg accccaagta cgcgccgagc
     1141 tcggccctca acaaccaggt gctggcgcca tcgccctatt tcggcatgga gcaggtgtgg
     1201 gatacccagg tcaatgcgca caatcccatg atggatcagg acggccgggt gtatttgacg
     1261 gcacagatcc gttcccccaa ggacccgccg gaatattgca agaaggattc accgctccgc
     1321 tcggcgcaac tctatccgct ggccggaccg cagaccgggt tcgtgcagaa ctcgcgccag
     1381 gttacgatct gggatcccaa caccaaaaaa ttctcccata tcgacacctg cttcggaact
     1441 catcatctga atttcgccga ggacgccaac aacacgttgt ggctcagcaa taatacccag
     1501 ggcgagcgcg ccgtggtggg ctggatcaac accaagctct actgggaaac tggcgacccg
     1561 gtgaaatcgc agggctggac tgcgatgatc gtggacacca atggcaacgg caagcgcgac
     1621 gaaggctaca acgagcccgg caagcccgtg gattctagca aggacacgcg catcccgttc
     1681 gcaatgtacg ggattgccta ttcgccggcc gacggctcga tctggggctc gaacctcacc
     1741 caccccggct acatcctgcg cgtggcgccg ggctccaacc cgcccgaaac cgcgctcgcg
     1801 gaaatctacc ggattccgct gcccggcttc ggcattcgcg gcagcgacat cgatcgcaac
     1861 ggcgtggtgt ggatgccgct cgattcaggc cacatcgcga gcttcgatcg gcgcaaatgc
     1921 aaggggccgc tcaacggacc aggcgcagaa ctcggcgaca aatgtccgga gggcttcgcg
     1981 ttctatccga tcccgggccc aggctttcaa ggcgatccgg gggcggaaga gaacccgtat
     2041 tacacctggg tcgaccagca taacatcttc ggactcggcg ccaacgttcc gcttgccacc
     2101 ggcaaccagt cggactcgct ccatgcgctg gtcgacggcc gggtgatcga actgcgcgtg
     2161 ccttatccga tgggtttctt cgccaagggc ctcgacggcc gcatcgacga ccccaacgcc
     2221 ggttggaaag gccgcggcct gtgggcaaca tcgggcaacc gcaccccaat gcacatcgaa
     2281 ggcattgatg ctccggcgcc cggtgccccg ggcaagacca ctgcgacatt gtcgagcccg
     2341 ctggtcgtgc actttcagct gcggcccgac ccgctggcgc attgataatc cttgttcttg
     2401 acgggggagg gtggcgccgc ttccgcgggt ccacgccgtg gaaaaagccc ccacaccgcc
     2461 ctccccgaag tcggggaggg gaagagcctc ggaggcacct at
//
LOCUS       DATILV010000928         3411 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_738229, whole genome shotgun sequence.
ACCESSION   DATILV010000928 DATILV010000000
VERSION     DATILV010000928.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3411)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3411)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3411
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_738229"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..194)
                     /locus_tag="VLJ17_22355"
     CDS             complement(<1..194)
                     /locus_tag="VLJ17_22355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25753.1"
                     /translation="MIVSSRFHVQCSRLGAKVSTRLIATLLVLWLCAGIAHPVKAQEL
                     RAKAEAEGKLMMYATFTAADS"
     gene            complement(569..1264)
                     /locus_tag="VLJ17_22360"
     CDS             complement(569..1264)
                     /locus_tag="VLJ17_22360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HSV25754.1"
                     /translation="MITLYSYPELFGVADNNGYGLKVFALMRLAGMPFRHEHIFDASA
                     APRGQLPYVVDDGETIGDSETIIAHLIGKYHLTIDAALTVAQRDTSLLITRMLDDLYW
                     VMSYSRWKDERYWPAFRDALMREHPRVTEDGLLKAREFNFQRYHFQGIGRYAPDAAYA
                     RGLADLQVLAHMIPAIGCVHGPQPTSVDAGIYGFIANIHFYDIDTPLKQFVSSQQNLV
                     RHCAAIHEAVMRA"
     gene            1888..3045
                     /locus_tag="VLJ17_22365"
     CDS             1888..3045
                     /locus_tag="VLJ17_22365"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-independent methionine synthase II
                     family protein"
                     /protein_id="HSV25755.1"
                     /translation="MWSKQTSGPAEEALRARLRSAVSEVVLAQRTAGVDIPNDGEFGK
                     PMRAASDRGAWGNYIFNRVSGFVPTPPEGVAPDVAAPGASMRIVGVRWEQREFAEFYA
                     DTGLGAPSTAASRPMCAGPIAYIGHEALSRDLANLRGAKDNAGVEEAFVASIAPGSLE
                     MFCRAQNRHYPAAEEFFEAIAAAMREEYRAIVEAGFILQLDDPGLPGAWDMLDPRPSL
                     KEYRRYAMLRVEALNRALESIPEDRVRYHICWGSWHGPHTTDIPLRDIADVMLKVRAQ
                     AYLIEAGNVRHEHEYKIWRDIKLPAGKILIPGVVSHATNVVEHPELVADRILAFANIV
                     GRENVIAGTDCGLGGRVHPQIAWAKLRALSEGAALASKKLWSSRRKNGKSL"
     gene            complement(3042..>3411)
                     /locus_tag="VLJ17_22370"
     CDS             complement(3042..>3411)
                     /locus_tag="VLJ17_22370"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HSV25756.1"
                     /translation="ITKGEKVLLIQRAPGIRGGGYWAPVSGEVEPGESQEAAVAREAM
                     EEVGLTVRPLRKVWENVSTRGSFRLHWWMAEYVGGELALNAAEVSDARWLTVDEICRL
                     DDTFEGDREFYRKILPSVVA"
BASE COUNT          752 a          995 c          986 g          678 t
ORIGIN      
        1 gagtcggcgg cggtgaaagt cgcgtacatc atcagcttgc cttccgcctc ggccttcgct
       61 ctgagctcct gcgcctttac tggatgcgca atcccggcgc aaagccaaag cacgagcaac
      121 gtcgcgatca gcctggttga aacttttgca cccaaccttg aacattgaac gtggaacctt
      181 gaactgacaa tcatggcaat tccgccaaca gccggccgta gcccgtgacc ggctcgttga
      241 gatgaaggat tttcctggtc gcccacacct gcaccggcat gctcgacagc attaaccgct
      301 cgaatatcct agtctcgtcg tcttatcaac cgacgaatta gacgatagtg aatccgtgag
      361 tagtgaatgg ctatgcggtt acggctattc gaaaattgac gcgataaggt ccagattcag
      421 gccagacccc agaccacgca cttatgattc cttgtggccg cattgaacac ctcgccctcg
      481 tgcgtgtgtc gcagtaccgg ttagagcgat ggggaatgag gcgctccagg gaagaggacg
      541 aatcgaagct gctcccttga cgcggaggct acgcccgcat caccgcttca tggatggcgg
      601 cgcaatggcg cacgagattt tgctgggacg acacgaactg cttcagcggc gtgtcgatgt
      661 cgtagaaatg gatgttggcg atgaagccgt agataccggc atcgacgctg gtcggttgcg
      721 gcccgtgcac acagcctatc gccggaatca tatgagccag gacttggaga tcggcgagac
      781 cgcgcgcgta ggcggcatcc ggcgcgtagc ggccgatgcc ctggaagtga tagcgctgga
      841 aattaaactc gcgcgccttg agcaatccgt cttcggtgac cctcgggtgc tcccgcatca
      901 acgcgtcgcg aaacgccggc caatagcgct catccttcca gcgcgaatac gacatgaccc
      961 aatagagatc gtcgagcatg cgcgtaatca ggagacttgt gtcgcgctgc gccacagtca
     1021 atgccgcgtc gatcgtcagg tggtatttgc cgatgaggtg cgcaatgatg gtctcactgt
     1081 cgccgatcgt ctcgccgtcg tcgacgacgt agggcagctg cccgcgcggc gccgccgaag
     1141 catcgaaaat gtgctcatgc cgaaacggca tgccggcaag ccgcatgagg gcaaacacct
     1201 tcagaccata gccgttgttg tcggccacgc cgaacagctc gggataggaa tagagcgtga
     1261 tcatggtacc tccgcctaat tacgcctaat tagagagaga ttagcctccg gtgtttcgat
     1321 gaccaagtga tagtggttat ccattagaca gtaagcatgg cactgccagt taaagcgttt
     1381 gacgacgtta cccaagcaat ccaaaaaagg ctttgcgatc cgtaccgtca tcgaagatgt
     1441 cttctcgggc attgccccgg gaggtcacat ggtagaccgc accgtcacat tccactctta
     1501 gaggacgagc catgatttgt gtgaattgtc acaataggtc atcgatagca ataaacaaga
     1561 ccttacccct ccatttacat tcctgcttga cgggaaaagt acaaatcgcc tagcgtctat
     1621 cgcatgacta ggatttcaag agtccctctt ccatcctcgt cacgttaccc aaatttgtga
     1681 aaccgattga aaggctaaca gaacgggatt tgcgttttta aaaaaccgca gacgagttaa
     1741 gtggcatcat gaaattaaca ttgcagtctt aatttgtact tcgaaagaga aataacgtag
     1801 tgtaggcgtt aaaagatgcg acgaagcact aagcgaattc tgagcacaca tgtcggcagt
     1861 cttccccggc cggccgacct gcgcgaaatg tggtcgaagc aaacaagcgg tcctgcggaa
     1921 gaagcgctac gggcgcgctt gcgatccgcc gtgagcgaag tcgtgctcgc tcagaggacg
     1981 gcaggcgtcg atattccgaa cgatggcgag ttcggcaagc cgatgcgcgc cgcatcggac
     2041 cgcggcgcct ggggcaacta catcttcaac cgcgtctctg ggttcgttcc gacgccgccg
     2101 gaaggggttg cgccggatgt tgcggcaccg ggagcgtcga tgcgaatcgt cggagtgcgc
     2161 tgggagcaac gggagtttgc cgagttctat gccgacacgg gtttgggagc gccgagcact
     2221 gctgccagcc gcccgatgtg cgccggtccg atcgcctata tcggacatga agccctgagc
     2281 cgggatctcg cgaatttgag aggggccaag gacaacgccg gcgtggaaga ggcgttcgtc
     2341 gcgtcgattg ctcccggcag cctggagatg ttctgccgcg cccagaaccg ccactatcca
     2401 gcagctgagg aatttttcga ggcgatcgcc gccgcgatgc gcgaggaata tcgggcgatc
     2461 gtagaggccg gtttcatctt gcaactcgac gaccccggat tgcctggcgc gtgggacatg
     2521 ctggacccac ggccgagcct caaggagtac aggcgctatg cgatgctgcg cgtcgaggcg
     2581 ctgaaccgtg cactggaaag tatcccggag gatcgagtcc gctaccacat ttgctggggt
     2641 agctggcatg gcccgcacac gacggacatc cctttgcgag acatcgccga tgtgatgctc
     2701 aaggtgaggg cgcaggcgta cttgattgaa gccggcaacg tgcgccacga gcacgaatac
     2761 aaaatctggc gggacatcaa gttgccggcg ggcaagatcc tcattcccgg cgtggtgagc
     2821 cacgcaacca atgtcgtcga gcaccccgag ctggtggcgg atcgcatcct ggccttcgcc
     2881 aatattgtcg gccgcgagaa cgtcatcgct gggactgatt gcggtctggg cggacgggtc
     2941 catccgcaga tcgcgtgggc aaagctgcgc gcgctatccg aaggcgccgc gctggcgagc
     3001 aagaagctgt ggagctcccg cagaaaaaat gggaaatcgc tttaagcaac gacagaggga
     3061 aggatcttcc gataaaattc ccggtcgcct tcgaacgtgt cgtccagacg gcaaatctca
     3121 tcaaccgtga gccagcgggc gtcgctcact tctgctgcgt tgagcgccaa ttcaccgccg
     3181 acgtactccg ccatccacca gtggagtcta aaacttcccc gcgtcgaaac gttctcccaa
     3241 accttccgaa gcggccgcac cgtcaagcca acttcttcca tcgcctcccg cgccaccgcc
     3301 gcttcctgac tctctccagg ctcgacttcg ccactgaccg gtgcccaata gcctccgcct
     3361 cggatgcccg gcgccctttg aatgagcaga accttttccc cttttgtgat c
//
LOCUS       DATILV010000929         5541 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3809254, whole genome shotgun sequence.
ACCESSION   DATILV010000929 DATILV010000000
VERSION     DATILV010000929.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5541
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3809254"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..882)
                     /locus_tag="VLJ17_22375"
     CDS             complement(<1..882)
                     /locus_tag="VLJ17_22375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HSV25757.1"
                     /translation="MPISFSSSEERDSRALGHGVTAVLGPTNTGKTHLAIERMLAHSS
                     GLIGLPLRLLAREVYNKVADRAGADAVALITGEEKIKPANPRFWVSTVEAMPRDLDVA
                     FVAVDEIQLGADLDRGHVFTDRMLNCRGREETLVLGAATVRPMVERLLPGANLLSRPR
                     LSQLTYAGEKKITRQPRRTAIVAFSSDEVYAIAELIRRQRGGAAVVLGALSPRTRNAQ
                     VELYQSGDVDYLIATDAIGMGLNLDVDHVAFASDRKFDGYQFRRLNPAELAQIAGRAG
                     RASRDGSFGTTGRCAPFD"
     gene            complement(1230..2078)
                     /locus_tag="VLJ17_22380"
     CDS             complement(1230..2078)
                     /locus_tag="VLJ17_22380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013499977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HSV25758.1"
                     /translation="MPWRICRGSKLVGLAVATCWLASGGAYAQGKLDARYTATLAGVP
                     IGKGAWVIEIGDDQFTAAASGMTTGLLRVFATGQGNSASRGTVRGDILMPTAFVSTIT
                     NDKRVEELRIVLSAGTVKDLVADPPTTPNPERIPLTDAHRRGVVDPMSAGLMRVSGNV
                     DPVSPEACRRTIAVFDGRMRFDLLLSFKRFDSVQAQRGYRGPVAVCGVQFVPLAGHVP
                     ERPAIKYLAAQQDMEIWLAPIAGTRIVVPYRIALPTPLGQGVLEATQFITAAMPRSTP
                     ATAAAR"
     gene            2374..2664
                     /gene="rpmB"
                     /locus_tag="VLJ17_22385"
     CDS             2374..2664
                     /gene="rpmB"
                     /locus_tag="VLJ17_22385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HSV25759.1"
                     /translation="MSRRCELTGKSAQVGHKVSHSNIKTKRRFLPNLINVTMMSDSLG
                     RTVRLRVSANALRSVDHRGGLDAFLAKARDGELSPRALDLKRQIAKKRAPAS"
     gene            complement(2702..3787)
                     /locus_tag="VLJ17_22390"
     CDS             complement(2702..3787)
                     /locus_tag="VLJ17_22390"
                     /inference="COORDINATES: protein motif:HMM:NF024841.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase-like activity of phytase family
                     protein"
                     /protein_id="HSV25760.1"
                     /translation="MQARRGRGHLRGETIAPTHYRFVPSWRLATALVACVTVAIVSAA
                     EAQKSGVDPPIRITVDASPIAAFSAGASDQRRFGKLEYLGGLELKSSYSEFGGFSAIR
                     VAPDGEHFVSLTDKGRWLTARIIHERDRPIGIAEATMAPMLGPDGRTLAARGWYDTES
                     LAERDGWFYVGIERVNRIVRFDFAHQGLLARAEVVAVPPGVSHLPNNKGLEALAFAPR
                     NGKLAGALMAFSERGLDANGNLKAFLIGGATPGEFSVRRRDDFDVSDSATLPSGDVLL
                     LERRFNWWSGIAMRLRRIAIADIAPGTLVDGIDLLFADMGYQIDNMEGLGVHADSNGD
                     TVLTLISDDNFSLLQRTVLLQFKLIDE"
     gene            complement(3802..>5541)
                     /gene="cobT"
                     /locus_tag="VLJ17_22395"
     CDS             complement(3802..>5541)
                     /gene="cobT"
                     /locus_tag="VLJ17_22395"
                     /EC_number="6.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014439260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051116 - cobaltochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobaltochelatase subunit CobT"
                     /protein_id="HSV25761.1"
                     /translation="KARLPEPPRKLTAADAAIVRGHADAIALRMACHDNAIHRRLLPG
                     SQQGRAVFEAVEQARVEAIGARRMQGVATNLAAMLDDKFHRGKFDEITDRADAPIEEA
                     LAMLVRERLTGQAPPPAARRIVELWRSWIEGRAGRELDRLEDMIEDQRKFGDAVHDLL
                     DSLDMGDERSNEDDEDDSEENNDGRQDEKGEDGEAAESEDSQRMSLEQADAATEDLPD
                     SAAEATDAPTADMPDDSEMGDSENPAEPWRPRYGKNEPRGPDYRPFITKFDETIAAED
                     LCEPDELDRLRGYLDKQLAHLQGVVARLANRLQRRLMAQQNRSWEFDLEEGLLDPARL
                     ARIIVDPMHPLSFKREKDTSFRDTVVTLLLDNSGSMRGRPITVAATCADILARTLERC
                     GVKVEILGFTTRAWKGGQSREAWLAANKPGNPGRLNDLRHIIYKAADTPWRRARRNLG
                     LMMREGLLKENIDGEALDWAHKRLLVRTEQRRILMMISDGAPVDDSTLSVNAGNYLER
                     HLRWVIEDIEQRSPVELIAIGIGHDVTRYYRRAVTIVDAEELGGVMIEKLAELFDEPE
                     SAPVQRAPRRLHA"
BASE COUNT         1069 a         1758 c         1655 g         1059 t
ORIGIN      
        1 gtcgaatggt gcacagcgtc cggtggtgcc gaagcttccg tcgcggcttg cacggccagc
       61 gcgcccggca atttgggcga gttcagccgg attgaggcga cggaactgat agccgtcgaa
      121 cttgcggtcc gatgcaaatg ccacgtgatc gacgtcgaga tttagcccca tgccgatcgc
      181 gtctgtggcg atgagataat cgacgtcacc cgattggtag agctcgacct gggcgttacg
      241 ggtgcgcggc gacagcgcgc cgagcacgac ggccgcgccg ccacgctggc gcctgatcaa
      301 ttccgcaatg gcgtacacct cgtcggagga aaacgccacg attgctgtgc ggcgcggttg
      361 gcgcgtgatc ttcttctcgc cggcataagt gagttgcgac agacgcgggc ggctaaggag
      421 attggcgccc ggcagcagcc tttccaccat cgggcgaacc gtagcggcgc ccagtacgag
      481 cgtctcctcg cgacctcggc aattgagcat gcgatcggtg aaaacgtggc cgcgatcaag
      541 atcggcaccg agttgtatct cgtcaaccgc cacgaaggct acatcgagat cacgcggcat
      601 tgcctccacg gttgataccc agaagcgggg attggcgggc ttgatcttct cctcaccggt
      661 aatgagtgcg acggcgtcgg cgccggcgcg gtccgcgacc ttattgtaga cctcgcgggc
      721 taagagccgc agcggcagcc caatcagacc ggaggaatgc gccaacatgc gctcgatggc
      781 gagatgcgtc tttccggtgt tggtgggccc caacaccgcc gtgacgccgt ggcccagggc
      841 acgcgagtcg cgctcctcgg aggaactaaa cgagatgggc atcgaagcct ccgccgccgg
      901 cgcacggacc ggccggcgcg tcaaacgagg tatctgtatc acaatgtgac ggaagccaag
      961 gagtgatggc tacgccctta acgcccgtga accaagcccg aacaaagcgc gcccgaatcg
     1021 ctgactcggc ctccattgag attcgttctc atccacatgt tgtgcggtga cgagttgaac
     1081 ccaccaaatc ctgcacaaat cgatgggaag tcgcgccaca acagggcttc aatcgtaaac
     1141 ggcacgcaaa cagccgtgtc gatttcgatt ccatattgtc aagcccgtag cctacaaggc
     1201 aggtagattc tgcactacaa agtcgcggct cagcgcgccg cggcggttgc cggtgtcgag
     1261 cgaggcattg cggctgtgat gaactgtgtg gcctccagga ccccctggcc caacggagtc
     1321 ggaagcgcga tccgatatgg aaccacgatc cgggttccgg cgatcggggc cagccatatt
     1381 tccatgtcct gctgcgccgc cagatatttg atcgccggcc gctcgggcac atggccggcc
     1441 agcggtacaa attgaacccc gcacaccgcg accggcccac ggtaacctct ttgagcttga
     1501 acgctgtcga agcgcttgaa actcaacagc aaatcgaacc gcatgcgtcc atcgaaaacc
     1561 gctatcgtgc gtcggcatgc ctcgggcgaa accggatcga cgttgcccga tacccgcatg
     1621 agcccggcgc tcatgggatc aacgacaccg cgccgatgtg catccgtcaa tggaatccgc
     1681 tccggattgg gcgtggtcgg cgggtcagca accagatcct tgacggttcc ggcgctcagc
     1741 acaattcgca gctcttcaac tcgcttgtca ttggtgatgg tcgacacaaa ggctgtgggc
     1801 atcaagatat cgccacgcac agtacccctg gaggcactgt tgccctggcc tgtcgcaaac
     1861 acccgcaaca aaccggtggt catcccgctc gccgctgcgg tgaattgatc gtcgccgatt
     1921 tcgatgaccc atgcgccttt gccgattggc acacccgcaa gggtggcagt gtagcgggca
     1981 tcaagcttcc cttgtgcata ggcgccgccg cttgcgagcc agcacgtcgc gaccgccaag
     2041 cctaccaatt tggaaccgcg acagatcctc caaggcaccg ctgatcctct cgatcgtgga
     2101 tgaccgctat tttgggcaga acagcttttt caacgcggat taagtcgatt gtgtgatcca
     2161 ttcctagatg gccggcaagc ccaatccgtc aaatctctgc gttgcaccag cgtttcaact
     2221 cattgaggtt tgcgccccaa acttgacctg ttctgcctcg atcattatag gtccaggata
     2281 gaaacaagct caaggttcac catagaaacg agctcaagat ttccacgttc agcgcggttt
     2341 cgggcgcgag cgcatgattt ccagaggtat gccatgtcac ggcggtgcga attgaccggt
     2401 aaatcggccc aggtcggcca caaggtcagt cactcgaata tcaagaccaa gcgacgtttt
     2461 ttgcctaacc tgataaatgt gaccatgatg tccgactcgc tcggccgcac ggtgagactt
     2521 cgggtttctg ctaacgcatt gcgcagtgtc gatcaccgtg gcgggcttga tgccttcctt
     2581 gccaaggcgc gcgatggcga gctttcaccg cgggcgcttg acctaaagcg gcagatcgcc
     2641 aagaagcgcg cgccggcaag ttgagccgcc gccgaaatcg tgtttctcca acgcgacgtc
     2701 tctattcatc gatgagcttg aactgcagca gcacggtacg ctgcagaagt gaaaaattat
     2761 cgtccgaaat cagcgtcagc acggtgtcgc cattggagtc tgcgtggacg ccgagcccct
     2821 ccatattatc gatctgatac cccatgtcgg caaacagcag gtcgattcca tcgaccagcg
     2881 tacctggggc gatgtccgca atcgcgatcc gccgtagccg catggcaatg ccgctccacc
     2941 aattgaaccg acgttccagc agcaacacgt cgccggacgg cagagtggca ctgtcgctga
     3001 cgtcaaaatc gtcccggcgt ctaacggaga attcgcctgg cgtcgcaccg ccgataagaa
     3061 aggccttgag atttccgttg gcatcaaggc cgcgctcgga aaacgccatc aaggccccgg
     3121 cgagcttgcc attgcgtggc gcgaacgcga gggcctcgag gcctttgttg ttgggcagat
     3181 gcgagacgcc cggtggcacc gcaaccacct cggcgcgagc cagcagacct tgatgggcga
     3241 aatcgaagcg cacgatgcgg tttacccgct cgatccccac atagaaccat ccgtcgcgct
     3301 cagcaagcga ttcggtatcg taccagccac gcgctgcgag cgtgcggccg tcggggccca
     3361 gcattggcgc catcgtggcc tcggcaatgc cgatcgggcg gtcgcgctca tggatgatgc
     3421 gtgcggtgag ccatcgtccc ttgtcggtga gcgagacgaa atgctcgccg tccggcgcga
     3481 cgcggatcgc cgaaaatcct ccgaattcgg aataagacga cttgagttcg agcccgccga
     3541 gatattctag cttgccgaag cggcgctggt ccgatgcgcc ggcgctaaag gccgctattg
     3601 ggctggcgtc aaccgtaatg cgtatcggtg ggtcgacgcc gctcttctgg gcttcggcgg
     3661 ccgatacgat ggcaacggtt acacaggcaa ccagcgccgt cgccaagcgc cagctgggca
     3721 cgaaacggta atgcgtaggg gcaatcgttt ccccgcgaag gtgtccgcgg cctcgacgag
     3781 cctgcatccg gcaatttccg gtcacgcgtg tagccggcgc ggcgcccgct ggaccggcgc
     3841 ggattctggc tcgtcgaaca gctcggcgag tttttcgatc atgacgccgc cgagttcttc
     3901 ggcgtcaaca atcgtgacag cgcgccgata gtagcgggtc acgtcatgac cgatgccgat
     3961 ggcaatcagt tcgaccggag aacgctgctc gatgtcctcg atgacccacc gcaaatggcg
     4021 ttctagataa ttgccggcat tgaccgaaag cgtggaatca tcaaccggcg cgccgtccga
     4081 aatcatcatc aggatcctgc gctgttcagt gcgcaccagc agacgcttgt gagcccaatc
     4141 cagcgcctcg ccgtcgatat tctccttaag taatccctct cgcatcatca atccgagatt
     4201 acgccgcgcc cgccgccatg gcgtgtcggc ggctttgtaa atgatgtgac gcaggtcgtt
     4261 aaggcggccc ggattgccgg gtttgttcgc cgccagccaa gcctcacgcg actggcctcc
     4321 cttccaggcc cgggtggtga acccgagaat ctccaccttc acgccacaac gctccagcgt
     4381 gcgcgccaaa atgtcagcgc acgtcgccgc caccgtaatg gggcggccac gcatcgaacc
     4441 ggaattgtcg agcagaagcg tcaccacggt gtcgcggaag ctcgtatcct tctcgcgctt
     4501 gaacgacaag ggatgcattg ggtcgacgat gatgcgcgcg agccgcgccg gatcgagcaa
     4561 cccctcctcc agatcgaatt cccacgagcg gttctgctgg gccattagac ggcgttgcag
     4621 gcggttcgcg agccgcgcca ccacaccctg caagtgggca agttgcttgt cgagataacc
     4681 gcgcaggcga tcgagttcat ccggctcgca taaatcctcg gccgcaatag tctcatcgaa
     4741 cttggtgatg aagggcctgt aatcggggcc acggggttcg ttcttgccgt atcgcgggcg
     4801 ccacggttcg gcggggttct ccgaatcgcc catttcggaa tcgtccggca tatccgcagt
     4861 cggtgcatcg gtcgcctcgg cagcactgtc gggaaggtct tcggtggcgg cgtcagcctg
     4921 ttcgaggctc atgcgctggc tgtcctcgga ctcagcggct tccccgtcct cgcccttttc
     4981 gtcctggcgc ccgtcgttgt tctcctcgct gtcgtcctcg tcgtcctcat tactgcgctc
     5041 atcgcccatg tcgagcgaat ccaacagatc gtggacggcg tcgccgaact tacgctggtc
     5101 ttcaatcatg tcttcaagac ggtcaagttc gcgaccggca cggccttcga tccaacttcg
     5161 ccacaactcc actatgcggc gtgcggccgg cggcggcgcc tgaccggtaa ggcgctcgcg
     5221 caccagcata gcaagcgcct cttcgatcgg cgcgtcggct cgatcggtga tctcgtcgaa
     5281 tttgccgcgg tggaacttgt catccagcat ggcggccaga tttgtggcga ccccctgcat
     5341 gcgtcgcgcc ccgatggcct cgacccgggc ctgctctacc gcctcgaata cggcgcgccc
     5401 ctgctgactg cccggcagca agcggcgatg gattgcgttg tcgtgacacg ccatccgcaa
     5461 cgcgatggcg tccgcgtgtc cgcgcacgat cgcggcatcg gcggccgtga gcttgcgagg
     5521 cggctccggc agccgcgcct t
//
LOCUS       DATILV010000930         4508 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3809279, whole genome shotgun sequence.
ACCESSION   DATILV010000930 DATILV010000000
VERSION     DATILV010000930.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4508
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3809279"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1026
                     /locus_tag="VLJ17_22400"
     CDS             <1..1026
                     /locus_tag="VLJ17_22400"
                     /inference="COORDINATES: protein motif:HMM:NF016992.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HSV25762.1"
                     /translation="VAGTVNGLLHRLQSNHEVRITEAAHDSFILHATGAAGKSNLRDH
                     RIRIIDGVIEDRLPAAWVTMLRGSRAEILLRANRFLFRPLELPKRAVEFLEGIVRAQI
                     DRLTPWTATEAVFSWTPPTDVSNDRIELTVAATARAFVAPYVQAISDLGAASVVVLTL
                     PADAEPDTAPIRVFEQRARGVLEIDRIRHALVALFLVSGLAAIISMGYSAVALDSLDT
                     EQQDLSRKIAARRNALRTGPEFAVSAQRMLERRKQSIPSSVIVLEALSQILPDHTYIT
                     ELRIEADKLQIVGVTRDAPALIALIEQSPHFTRATFYAPTTRTPGEPGERFHIEAQIK
                     PIFAVGT"
     gene            1023..1586
                     /gene="gspM"
                     /locus_tag="VLJ17_22405"
     CDS             1023..1586
                     /gene="gspM"
                     /locus_tag="VLJ17_22405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspM"
                     /protein_id="HSV25763.1"
                     /translation="MNISNLFTSFLLRYPAGAALLYAGLVMVFAITAWTTVAEIVARR
                     DAVAASANILTQLESRKPAAPGPAKDGNPAVEGSPLLEGTTVTIGGANLLQRVAGSVA
                     KLGGNILYTQVDLQGTRSKDGFVSVTVSCEVEQPLLQELLYDLESGMPFLFVDQLVAQ
                     GPAVPGATPEGKLRVLISVSGQWQGSK"
     gene            1583..2275
                     /locus_tag="VLJ17_22410"
     CDS             1583..2275
                     /locus_tag="VLJ17_22410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25764.1"
                     /translation="MKPRRAFSLLTGVALLVAIAAYIEIARTTAQPSDQVVNSKPANP
                     VRTAARPVDPAVDGSASAGNPLWVLPLKQLSVTRERPIFSPSRRPPPPATPTYVAPVA
                     AVRQPARPAEPERPSVTLLGTIVGEAERLGVFLEPATRNIMRMRIGEDHQGWVLRAVQ
                     TREVTLAKGRQNIVLELPPPGGEGGMQASDFFPPGAQSFQGIPVQGAQPAPPQPAQRQ
                     QLPAQPAQRPRR"
     gene            complement(2706..3908)
                     /locus_tag="VLJ17_22415"
     CDS             complement(2706..3908)
                     /locus_tag="VLJ17_22415"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008196294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HSV25765.1"
                     /translation="MGRLLEGIRVLDLTNVLAGPFGAYQLALLGADVIKVEAPGCGDL
                     ARQLGADADLNRALMGVSFLAQNAGKRSVTVNLKSKAGKEVFHRLVGSADVVIENFRP
                     GVMERLELDYASLCEAKPSLIYCAISGFGQDGPLKDNPAYDQIVQGLSGVMSVTGDAA
                     TAPLRVGYPVADTIGGLTAALAIAAALVRRGRTGKGEFIDVSMLEATLVTMGWQVSNW
                     LIAGVRPQPLGNENMTAAPSGTFATGNGPLNIAANQQQQFETLARLIGRPELATDPRF
                     AEREARKRHRFVLKAEIESALVARSATEWSALFNAHGVPAGEVLDIPAALAHPQVAAR
                     GLVKMFDGTSGIANPVAVVRSGFRLKSGDPAPAMPPPRLGADTEDILAALGYGAEEIA
                     ALRREQAI"
     gene            complement(3914..>4508)
                     /locus_tag="VLJ17_22420"
     CDS             complement(3914..>4508)
                     /locus_tag="VLJ17_22420"
                     /inference="COORDINATES: protein motif:HMM:NF021778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="beta-propeller fold lactonase family protein"
                     /protein_id="HSV25766.1"
                     /translation="GPRHLDIHPTKPLVYVSIERQNQLIVYKLTPDGDLVPEQLFTKA
                     TLADPPHKFPVQSAGPIHIHPNGRFVYLGNRSGVTGSLVPGVEEVDGKKVFSGGESNI
                     AVFAIDQKTGEPNAIQHADIRAAHPRTFSLDTSAKLLVAGSLAPTAVRDGGKVVALPA
                     GLSVFRVGPDGKLDFVRKYDLDVGTYTQWWSGMVALV"
BASE COUNT          850 a         1413 c         1370 g          875 t
ORIGIN      
        1 gtcgccggca ccgtcaacgg gctgctgcat cggctgcaat cgaaccacga ggtgcggatt
       61 accgaggcgg cacacgattc ctttatcttg catgccaccg gcgctgccgg aaaatcgaat
      121 ctgcgcgacc accgcatccg catcatcgac ggcgtgatcg aggatcgcct gccggccgca
      181 tgggtaacga tgctgcgcgg cagccgcgcc gagatacttt tgcgagcaaa ccgattcctg
      241 ttccgcccgc tggaactgcc caaacgcgcc gtcgaatttc ttgaaggcat cgtccgcgca
      301 cagatcgacc gtctgacgcc atggaccgcg accgaggcgg tcttcagctg gacgccgccg
      361 acggatgtat cgaacgatcg gattgaactg accgtcgctg cgacggcacg tgcctttgtg
      421 gcgccctatg tgcaggctat ctcggatctt ggcgctgcgt ctgttgtggt gctgacactc
      481 ccggccgatg ccgagccgga tacggcacct attagggtgt tcgagcagcg ggcgcgcggc
      541 gtactcgaaa tcgaccgcat tcggcatgca ctcgtggccc tgttcttggt aagcgggctc
      601 gcggccatta tatcgatggg ctattcggcg gttgccctcg atagtctgga caccgagcaa
      661 caggaccttt cgcgaaaaat tgcagcgcgg cgcaacgcac tgcgcaccgg tcccgaattc
      721 gcggtttcgg cgcagcgcat gcttgaacgc cgtaagcagt cgataccttc gagcgtgatc
      781 gtgctggagg cattgtcgca aatccttccc gatcacacct acatcaccga gcttcgcatc
      841 gaggcggaca agctgcagat cgtcggcgtc acccgcgacg cgcccgccct gatagcgttg
      901 atcgagcaat ctccgcattt cacgcgcgcg acgttctatg cgccgaccac gcgcacgccc
      961 ggagagcccg gtgaacggtt tcacatcgag gctcagatca agccgatctt tgcggtaggc
     1021 acatgaacat atcgaatctg ttcacgagct tcctgttgcg ctacccggcc ggtgctgcgc
     1081 ttctctacgc cgggctcgtg atggtgttcg ccatcacggc ctggacgacg gtggcggaaa
     1141 ttgtggcgcg gcgtgacgcg gttgctgcta gcgccaatat tttgactcaa cttgaaagtc
     1201 gcaaaccagc cgcgcccggc ccggccaagg atggtaatcc ggcggtcgaa ggctcgccgc
     1261 tgcttgaagg cacaacggtg acgatcggcg gcgccaacct tttgcagcgg gtcgccggtt
     1321 cggttgccaa gcttggcggc aacatcttgt atacgcaggt ggacttgcag ggaacgcggt
     1381 ccaaggacgg tttcgtcagc gttacggtca gctgcgaagt agagcagccg ctgctccagg
     1441 aactgcttta tgatctggag tctgggatgc cgttcctgtt cgtcgatcaa ttggtggcgc
     1501 agggccctgc ggtgcctgga gcgacgccgg aaggaaagtt gcgcgtcctg atttcggttt
     1561 ctggacagtg gcagggatcg aaatgaaacc gcggcgcgcg ttttcgttgt tgaccggcgt
     1621 ggccttgctc gttgccattg cggcctatat tgagattgcg cgtacgaccg cgcagccatc
     1681 cgaccaggtc gtcaattcca agccggccaa tcctgtgcgc accgcggcgc ggcccgttga
     1741 tccggcggtg gacggctccg catctgccgg aaacccgctt tgggtgctcc cgctcaagca
     1801 attgtcggtc acgcgcgaac ggccgatttt ttcgccgtcg cgccgcccac cacctcctgc
     1861 gacgccgact tacgtcgctc cggtggcggc ggtgcggcag ccggcaagac cggcggagcc
     1921 tgagcgccca tcggtcacgt tgcttggcac aatcgtcggc gaggccgagc ggctcggcgt
     1981 tttcctcgag ccggcgacgc gaaacatcat gcgcatgcgc atcggagagg atcatcaggg
     2041 ctgggtgctg cgtgcggtcc aaacgcgcga agtgaccctt gcgaaaggcc gccaaaacat
     2101 cgtgctagaa ttgccgccgc cgggcggaga aggcgggatg caggcctctg actttttccc
     2161 gcccggtgcg caaagtttcc aaggtatccc ggtccaaggc gcgcaaccag ctcctccgca
     2221 acccgctcag aggcagcagc ttcctgcgca acccgctcag aggccgcgac ggtgaccgcc
     2281 acgcaacccc gaccccgttg caaaggattg ttctttgaaa aaggctgacc aaacagccga
     2341 cgccaaattt tgctccaaaa tccgacaacg tttgttcgtc ctatgatgat tccgatgctc
     2401 cgcagcattt ggagcttcca tgatcaggac cgccttagca cttttgactt tgagcatcgc
     2461 aacgattgcg tctgcacaga acaggcctcc cggttccgaa cctgacgccc tggacttctg
     2521 cgtgtacggc ggccagttct actcgctagg agcgtcgatt tgtgtcggta aggaagccgc
     2581 tatcaaatgc atccgaaaca gtaccattac caatgaattg agagacctta atgctaatgc
     2641 ggacgaccaa gccaaaacgc gtcctgtttg gctgaatttt caacaaaagc tttgctgagg
     2701 ctggcttata ttgcctgctc ccgacgcagc gctgcaatct cttccgcccc gtagcctaac
     2761 gcagcaagaa tatcttccgt atcggcgccg agccggggtg gcggcatggc aggtgcgggg
     2821 tcgccgctct tcaagcgaaa gccagaacgt accactgcga cagggttcgc gatgccagac
     2881 gtcccgtcga acattttcac caatccgcgc gcagcgacct gcgggtgggc gagcgctgcc
     2941 ggaatgtcga gcacctcacc ggccggaact ccatgtgcgt tgaaaagcgc tgaccattct
     3001 gtcgccgatc ttgccacgag cgcggattcg atctcggcct taaggacgaa acggtggcgc
     3061 ttgcgcgcct cgcgttcggc aaagcgcggg tccgttgcga gttccggtcg gccgatcagc
     3121 cgcgccaggg tttcgaactg ctgctgctga ttggccgcga tgttgagcgg accgttgccg
     3181 gtggcgaaag tcccggacgg ggccgccgtc atattctcgt tgccgagcgg ctgcggacga
     3241 acgcccgcaa tcaaccagtt ggagacctgc cagcccatgg tgacgagcgt cgcctccaac
     3301 atggatacgt cgatgaactc accctttccg gtgcgtcctc ggcgcaccag ggccgccgcg
     3361 atcgcaagtg ccgcggtcag ccctccgatg gtgtcggcaa ccgggtagcc gacccgcagc
     3421 ggtgcggtcg ctgcatcgcc agtcacgctc atgacccccg acaggccctg cacgatctgg
     3481 tcataggccg ggttgtcctt gagaggccca tcctgcccga agcccgagat ggcgcagtag
     3541 atgaggcttg gttttgcttc gcacagggaa gcataatcca gctccagtcg ctccataacc
     3601 cccggccgaa agttttcgat gacgacgtcc gctgacccga ccaggcggtg aaacacctcc
     3661 ttgccggctt tgctcttcaa attgaccgtt acggatcgct tgccggcgtt ctgagcgaga
     3721 aacgaaacgc ccatgagtgc acgattgaga tctgcgtcgg cgccgagctg gcgggcaagg
     3781 tcgccgcaac ccggcgcctc gaccttgatc acgtccgcgc ctagcagcgc gagttgatag
     3841 gcgccgaacg ggccagccag aacgttggtc aagtcgagga cgcgaatgcc ttcgagcagc
     3901 cgacccattg gctttaaacc agcgcgacca tgccactcca ccactgcgta taggtgccga
     3961 catcaaggtc atatttgcgc acaaagtcga gtttgccgtc ggggcccacc cggaacaccg
     4021 acaatcctgc cggtagagcc accaccttgc cgccgtcgcg tacagcggtc ggcgctagcg
     4081 acccagccac cagcagcttc gcgctggtat cgagcgagaa tgtccgcgga tgggcggcgc
     4141 ggatatcggc gtgctgaatg gcgttaggct ccccggtctt ctggtcaatc gcaaacaccg
     4201 cgatattgct ttcgccgccg ctgaacacct tcttgccgtc gacctcctcg acgcccggca
     4261 ccaaactgcc ggtcacgccg gagcgattac cgagatatac aaacctgccg ttggggtgga
     4321 tgtgaatagg accggcactc tggaccggga acttgtgggg cgggtctgcc aaggtagcct
     4381 tggtgaacag ctgctcaggc acaagatcac catcgggcgt gagcttatat acgatgagct
     4441 ggttctgtcg ctcgatcgag acgtagacca gcggcttggt gggatgaatg tcgagatggc
     4501 gtgggcca
//
LOCUS       DATILV010000931         3310 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2023215, whole genome shotgun sequence.
ACCESSION   DATILV010000931 DATILV010000000
VERSION     DATILV010000931.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3310)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3310)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3310
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2023215"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..500)
                     /locus_tag="VLJ17_22425"
     CDS             complement(<1..500)
                     /locus_tag="VLJ17_22425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008188701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon monoxide dehydrogenase"
                     /protein_id="HSV25767.1"
                     /translation="MNDQTPTSAERAEKLQGMGCKRKRVEDIRFVQGKGKYVDDLKLP
                     GMLYGDFTRSPHGHARIKKIDTTKAAAVPGVVAVLTAETLKTVNLAWMPTLAGDVQMV
                     LADGRVLYQNQEVAFVIAEDRYTAADAADLVEVEYEPLPVNVDPLKAMAADAPVIRED
                     IKDKTDG"
     gene            complement(497..997)
                     /locus_tag="VLJ17_22430"
     CDS             complement(497..997)
                     /locus_tag="VLJ17_22430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HSV25768.1"
                     /translation="MAKSQVSMTVNGKPAEALVEPRTLLIHFLREQLNLTGPHIGCDT
                     SHCGACTVDLDGKSVKSCTMFAVQANGASIRTIEGMAAADGTLHVLQEAFREMHGLQC
                     GFCTPGMITRAYRLLEENKNPSEEEIRFGISGNLCRCTGYQNIVKAIQYAAAKISGVP
                     FQEAAE"
     gene            complement(1016..1879)
                     /locus_tag="VLJ17_22435"
     CDS             complement(1016..1879)
                     /locus_tag="VLJ17_22435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HSV25769.1"
                     /translation="MIPGSFAYHRPTSVNEAVGLLADLGDEARPLAGGHSLIPMMKLR
                     LATPEHLVDLAGIPHLKGIRSDGGDVVIGPMTTQHEIVGSDLLAEKIPLLREVSLLIA
                     DPQVRYVGTLGGNVANGDPGNDMPAVMMCLGASYQVVGRSGERSIAARDFYRGAYLTA
                     LNPGEILASVRIPVPAAGHGFAYEKLKRKVGDYATAAAAVVLTMSGGTVATCSIGLTN
                     VAATPLWAEEAASIVTGSALDTAIVQRAVAAAEAITSPASDGRGPAHYRTKMAGVMLA
                     RALASAKARAR"
     gene            2326..3309
                     /locus_tag="VLJ17_22440"
     CDS             2326..3309
                     /locus_tag="VLJ17_22440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25770.1"
                     /translation="MPKAKDPKATKLVLTQPQAACLAALRHCKETQPKIAIEAKLALA
                     TAAAALRILARLGLAEHDQVKKWHATQRGQTCRFDTVPDQSRQNSGLPGPGGRRLLAL
                     LDRPMRGREIVEKLEMTHQGVRQLLIKLHAHGHVRLADPENPFWLVMRAGDKTPVLSR
                     HEERVLSAVPQDYATDATKIRIAAGVPDSEIHPILERLLVRRFIEMSDGLRGTRVYRA
                     TDAGFNHPQCDQSACRAQAQRPPVESDRIRQVLSAIFDSGELRIKDVTSTVSVPHQSI
                     NALMQYLKRKRLVKKSGRELHSPYALTAEGIAILVEMTRNSGRQGEAAGRT"
BASE COUNT          637 a         1020 c         1036 g          617 t
ORIGIN      
        1 ccgtcggtct tgtccttgat gtcctcacgg atcaccggcg catcggccgc catcgccttg
       61 agcggatcga cgttgacggg cagcggctcg tactccacct cgaccagatc ggcggcatcg
      121 gccgccgtat agcgatcctc ggcgattaca aacgcaacct cctggttctg gtacagcacc
      181 ctgccgtcgg ccagcaccat ctggacgtcg ccagcgagcg taggcatcca tgcgaggttc
      241 acggtcttga gcgtctcggc cgtcagcacc gccacgacac ccggcacggc agcggccttg
      301 gtggtgtcga tcttcttgat acgggcgtgg ccgtgcggcg agcgggtgaa atcgccgtag
      361 agcattccgg gcagtttcaa atcgtcgacg tacttgccct tgccctgaac gaagcgaatg
      421 tcttcgacgc gcttgcgctt acagcccatt ccctgcagct tttcggcgcg ctcggcggag
      481 gtgggggtct ggtcgttcat tctgcggcct cctggaacgg cacgccactg atcttcgcgg
      541 cggcatattg aatagccttg acgatgttct gataaccggt gcaacggcac aagtttccgg
      601 aaatgccgaa acggatttcc tcttccgacg ggttcttgtt ctcctccaag agccggtagg
      661 cccgcgtgat catgccgggc gtgcagaatc cgcattgcag gccgtgcatc tcacgaaaag
      721 cttcctgcaa cacgtgcaag gtgccatcgg ccgcggccat gccctcgatg gtgcgtatgc
      781 tcgcgccgtt cgcctgcacc gcgaacatag tgcaggattt gaccgacttg ccgtcgagat
      841 cgaccgtaca ggcaccgcaa tggctggtat cgcagccgat atgcggcccg gtgagattga
      901 gctgctcgcg caggaagtgg atgagcaagg tgcgcggctc gaccagcgct tcggccggct
      961 taccgttcac cgtcatcgag acttgagact tggccatggg tagctcctag ggaattcagc
     1021 gtgcgcgcgc tttggcgctg gctagggcgc gagccagcat gacgccggcc atcttggtgc
     1081 gataatgggc cggtccgcgg ccgtcggagg cgggcgacgt gatcgcctcg gccgcggcga
     1141 ccgcccgctg cacgatggcc gtatccagcg cggaaccggt tacgatgctt gcggcctctt
     1201 cggcccacag cggggtggct gcgacattgg tgaggccgat cgagcaggtc gcaacggtgc
     1261 cgccgctcat cgtcaggaca accgcggcag cggcggttgc ataatccccg actttgcgtt
     1321 tgagcttttc ataggcaaag ccgtgacctg ccgcaggaac cggaatgcgg acgctggcga
     1381 ggatttcccc cggattgagc gccgtgaggt aggcgccccg ataaaaatct cgcgccgcaa
     1441 tgctccgctc gccgctgcgg ccgacgacct ggtagctggc gccgaggcac atcatcactg
     1501 ccggcatgtc gttaccggga tcgccgttcg ccacgttacc gccgagcgtg ccgacgtatc
     1561 ggacctgcgg atcggcgatg agcagtgata cctcgcgcag cagcgggatc ttctcggcca
     1621 acaggtcgga gccgacaatc tcgtgctgtg tcgtcatggg cccgatgacg acgtcgccgc
     1681 cgtcggagcg gatgcccttg aggtgcggga tgccagcgag gtcgaccaga tgctcgggtg
     1741 tggccagtct gagcttcatc atcggtatca ggctgtgccc gccggcgagc ggacgcgcct
     1801 catcgccaag atcggcgagc aggccgacgg cttcgttgac ggatgtcgga cggtgatagg
     1861 cgaatgaacc aggtatcaaa ggcatcctcc ccgatgtttc gcggcccgtc cgcgattaac
     1921 tctaaacttg ccggacgggc ttgcgcccct tttggtgttt attcgcacta tttggcgatt
     1981 attcgcacaa tagtgcaccg ctttatggcg gctatcccgt cgcgggattg ccgcgggcct
     2041 aaatgtagca gacggatcga cgggcgagaa cagaaatact atggcttgcc tggataggct
     2101 ttggagagca gatttcgctt taatgggatc aacgagccgc gtcatcgccc gcgaaagggc
     2161 gacccggtaa ccccggcggc gctgccgggg tatgggattc ccgccttcgc gggattgaca
     2221 ccgcagaatt ggtaagcgca gttgtggaaa ggcgcctgct acctcaacgc atgaaaaccc
     2281 cacggcgcat actgcgacca gccgaatcaa acggagggcc gcagcatgcc caaggccaaa
     2341 gatcccaagg ctacaaaact tgtcctcacc cagccgcagg ctgcctgcct ggccgcgctc
     2401 cgccattgca aagaaactca gcccaagatc gccatagagg cgaagctcgc tctggcgaca
     2461 gcagccgcgg cgctgcgcat tctagcccgg ctcgggctgg ccgaacacga ccaggtcaaa
     2521 aaatggcatg cgacgcagcg gggccaaacc tgtcgcttcg acaccgttcc ggatcaatca
     2581 cgccagaaca gcgggctacc gggccccggc gggcggcgtc ttctcgcatt attggatcga
     2641 ccgatgcggg gcagggaaat cgttgaaaaa cttgaaatga ctcatcaggg tgtccgccaa
     2701 cttttgatca agctacacgc ccacgggcat gtgcgcttgg ccgacccgga aaacccgttt
     2761 tggcttgtaa tgcgcgcggg cgataaaaca cccgtgctgt ctcgccacga ggagcgcgta
     2821 ctgtctgcag tgccgcagga ttatgccacc gatgccacca agatcaggat tgccgcaggg
     2881 gtgccggaca gcgagattca cccgatactg gagcgcctgc tggtccgcag attcatcgaa
     2941 atgtccgatg gattgcgggg aacccgggtc tatcgcgcaa ccgacgccgg attcaatcat
     3001 ccgcaatgcg accaatccgc ctgtcgtgcc caagcccaac gcccgccggt cgaatccgac
     3061 cgaattcgcc aagtactgtc ggcgatcttc gattccggag aattgcggat caaagatgta
     3121 acgagcacgg tgagcgtgcc gcaccaatcg atcaacgcgc tgatgcagta tcttaagcga
     3181 aagcgcctcg tgaaaaaaag cggccgcgag cttcattcgc cctatgcgct gacggcggag
     3241 gggatcgcga tcttagtgga aatgacgcgg aattcggggc ggcaaggtga agcggccggg
     3301 cggacgtagc
//
LOCUS       DATILV010000932         4084 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1510288, whole genome shotgun sequence.
ACCESSION   DATILV010000932 DATILV010000000
VERSION     DATILV010000932.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4084
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1510288"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..186
                     /locus_tag="VLJ17_22445"
     CDS             <1..186
                     /locus_tag="VLJ17_22445"
                     /inference="COORDINATES: protein motif:HMM:NF021391.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2092 domain-containing protein"
                     /protein_id="HSV25771.1"
                     /translation="PLPRKFVLTSKKVAGEPQFTVLIRSWDLTPKLTDQMFTFVPPKG
                     AKKIEFLQLTAEAAKPK"
     gene            506..1003
                     /locus_tag="VLJ17_22450"
     CDS             506..1003
                     /locus_tag="VLJ17_22450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25772.1"
                     /translation="MKTFLMRVVLTASLLVLSIADLPNSPLRLGFVKNAEAIIGMPWT
                     PLSFAGVARRSMYREAAYGAAAANAAAMNAAAANAAYANAAAAQAAAANAAAAQAAAA
                     QAQAAAAAAHAAASALPLGTIVPSLPPGCTSTVIGGVNYFNCAGVYYRAGFQGNNIVY
                     IVSAP"
     gene            1167..1712
                     /locus_tag="VLJ17_22455"
     CDS             1167..1712
                     /locus_tag="VLJ17_22455"
                     /inference="COORDINATES: protein motif:HMM:NF016301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraquat-inducible protein A"
                     /protein_id="HSV25773.1"
                     /translation="MAEPIDLPLALTVTAAIVLIIANTAPLMSLSAVGRHASTTIGGG
                     AKEMLFQGEAITAMIVAFCAVIAPAGYILFMLAVLLAARRPPAPHWVDELLRGAELMK
                     PWSMNEVMMLGILVALIKIAELATVEAGIGMYAVGALVILFPAIMVTFDPGEIWQRVE
                     WADDRLPPPLPSDEGSGAERA"
     gene            1877..2518
                     /locus_tag="VLJ17_22460"
     CDS             1877..2518
                     /locus_tag="VLJ17_22460"
                     /inference="COORDINATES: protein motif:HMM:NF016301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraquat-inducible protein A"
                     /protein_id="HSV25774.1"
                     /translation="MSVVPLTAAEAGLVSCEFCSLLSRPVDATEPGYCPRCGAELVWR
                     RHHSIQYTWALVIAAAICYIPANMLPVLNTTTLGSTDSDTIMGGVVFLYTSGSWPLAL
                     IVLIASVMVPLGKLVALVYLLITVQRGSLGGGRERSRLYRMVVFIGRWSMLDVFVDTF
                     TVALVQLSPLMSVEPGPGVLFFAAVVVLTMIAAESFDPRLIWDSETSGPERHG"
     gene            2511..>4084
                     /locus_tag="VLJ17_22465"
     CDS             2511..>4084
                     /locus_tag="VLJ17_22465"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HSV25775.1"
                     /translation="MAESTDRDNIPQATVVPRRRQRISVVWIVPILAAVVAIGIAIQR
                     IMSEGPTITIVFKAAQGVEAGKTFIKYKDVNIGQVTAVKLSPDHSKVEVTAKIDKSAT
                     GLMVADAKFWVVEPRVTLGGVSGLSTLLSGNFIGFEVGKLDKPQRRFTGLEVPPIITS
                     GQPGQQFVLSAKDLGSLGIGSPIYFRRLQVGQVIAYDLSSDGTAMNIKIFVNAPYDKY
                     VNADTRFWNASGIDVSLGAGGLDVRTQSLVAVLAGGLAFDTPSIAAKAAPAAANTVFT
                     LYNDQTAAMKQPDTIAAHYVLYFNESLRGLSVGAPVTLLGLPGGEVTAIGLAIDPKTF
                     NIRGRVEIATYPERLIARLNVKQAAAGEEIVRSLRERHAFMQRLVEQRGLRAQLRSGN
                     LITGQLFVALDFYPNAPKQKVDWNQDPVELPVVPSTVSDIEAKLTGIVAKLDKLPLEA
                     IGDDLRKALVSLDQTLKDAGKAVNRIDGEVTPGLKTTLDDLRGTIGVVDRVLNNANAT
                     LVGKDAPAQQELRDAL"
BASE COUNT          807 a         1217 c         1213 g          847 t
ORIGIN      
        1 ccgctgccgc gcaaattcgt gctcacttcg aaaaaagttg ccggagagcc gcagttcacc
       61 gtgttaatta ggagctggga tctgacgccg aagttgaccg atcagatgtt cactttcgtg
      121 ccacccaaag gcgccaagaa gatcgagttt ctccagctga ctgccgaagc ggcgaaaccg
      181 aaataggttg agtttcgaat gtactgtcag gatcattcac cgcagagaca gaacgcggca
      241 atcccgcaac caaaaaatcg gaatatctcg cgcaaagcgc gcaaaggggg agtattgtca
      301 tttcgaccga agggagaaat ctttctcaga tccctcgcat ccgctcggga tgacagacct
      361 tgccctgtca cttcgcgttc ttggcgtctt ggcgggagaa taatcctaag cgctctcagc
      421 gcctcagcct tgaaaactgt ggctgatccg tcctttggcg gatccgtggt gaactatccg
      481 aataaatcag aaaaggagtg aatcagtgaa aacgttttta atgcgggtag tgttgactgc
      541 gtccctgctc gtcctgtcca tcgcggacct gcccaattcc ccgttgagac taggattcgt
      601 caaaaatgcg gaagccatca tcggcatgcc ctggacgccc ctgtcttttg caggcgtggc
      661 gcgccgttcg atgtatagag aagctgcata tggcgcggcc gccgcgaatg ccgcggccat
      721 gaacgccgct gctgcaaacg ccgcctacgc caacgctgct gcggcacaag cggctgccgc
      781 gaatgcggcc gcggcgcaag ccgccgctgc tcaggcgcaa gcggccgctg ccgccgccca
      841 cgcagctgcc tccgcgttgc ccttaggtac gattgtgccg tcgctgcccc ctggatgtac
      901 ctcgaccgtg atcggcggcg ttaattattt caactgcgcc ggcgtttact accgggccgg
      961 tttccaggga aacaatatcg tctatattgt ctctgcgcct taaaaaagtg tcgagggaca
     1021 agaggaaagg atcatccaat ccctgccgct agtgctttat ggaaatgatc gcttgccctg
     1081 attgcgacct gttgcagaat atcccggacc tcccgccggg ggccaaggcg cgctgcccgc
     1141 gctgcgcctg tacggttgcg acccggatgg ctgaaccgat cgatttgccg cttgccctca
     1201 ctgtcaccgc cgccatcgta ctcataatag ccaataccgc gcctctgatg agcctttcag
     1261 ccgtcgggcg gcatgcgagc acgaccatcg gcggcggcgc caaggagatg ctttttcagg
     1321 gcgaagcaat caccgccatg atcgtcgcgt tttgcgcggt gatcgcgccg gcgggctata
     1381 tcctgtttat gctggcggtc ttgctcgcgg cgcgacggcc acccgcgccg cactgggtag
     1441 atgagttgct gcgcggggcc gagttaatga agccctggtc gatgaatgag gtgatgatgc
     1501 tgggcatcct cgttgcgctc atcaaaatcg ccgagctggc caccgtggag gccggcatcg
     1561 gcatgtatgc ggtgggcgca ctggtgattc tctttcccgc catcatggtg acattcgacc
     1621 cgggagaaat ctggcagaga gtcgagtggg ccgacgacag gctgccgccg ccacttccct
     1681 ccgacgaagg ttccggcgca gagcgagcat aagatgaaaa gtattcacca cagagacgcg
     1741 gagttcacag agatcggagt atttcttaat caagaactct tttctctgcg tcctcggcgt
     1801 ctccgcggtg aatcctccga atccttcgtg gtcttcgtga gctttgtggt gcaaatgttc
     1861 gatggagagt agtacgatga gcgttgttcc actgaccgcc gcagaggcgg gactggtttc
     1921 ctgcgaattc tgcagtttgc tgtcgaggcc ggtggatgcg actgagcccg gctactgccc
     1981 gcgctgcggt gcggagcttg tatggcgccg tcatcactcc attcagtaca cctgggcgct
     2041 cgttatcgcc gcggcgatct gctacatccc ggcaaacatg ttgccggtgc tcaatacgac
     2101 cacgctcggt tccaccgatt ctgacaccat catgggcggc gtggtattcc tgtacacttc
     2161 gggatcgtgg cccctcgcgc tcatcgtgct catcgccagc gtgatggtcc ctctcgggaa
     2221 gctggtggcg ctcgtttatc tgctgatcac ggtacagcgt ggctctctcg gcggcggccg
     2281 cgagcgcagc cggctctatc gcatggtcgt atttatcggg cggtggtcga tgctcgacgt
     2341 attcgtcgac acattcaccg tcgccctcgt gcaactctcg ccgttgatgt cggtggagcc
     2401 cggtccggga gtgctgtttt tcgcggcggt agtcgtgcta acaatgatcg ctgcagaatc
     2461 cttcgaccca cgcttgattt gggattcgga aacgagcgga ccagaacgcc atggctgaga
     2521 gcaccgatcg cgataacatt ccgcaggcta ccgtcgtgcc gaggaggcgc cagcggatct
     2581 ccgtcgtctg gatcgtaccc attctcgccg ccgtggtggc catcgggatc gcaatccagc
     2641 gaatcatgag cgaaggccca accatcacca tcgtgttcaa ggccgcccaa ggggtcgagg
     2701 ccggcaagac ctttatcaaa tacaaggacg tgaacatcgg ccaagtgacg gcggtgaagc
     2761 tttcccccga tcactcgaag gtagaggtga cggcaaagat cgacaaaagc gcgaccggcc
     2821 tcatggtcgc agacgcgaag ttctgggtcg tcgagccgcg cgtcactctt ggcggggtat
     2881 cggggttaag caccttgctc tccggcaact tcattgggtt cgaagtcggc aaattggaca
     2941 agccgcagcg caggttcacc ggacttgagg tgccgccgat cattaccagc ggccagccgg
     3001 gccagcagtt cgtgctcagt gccaaagacc tagggtcatt ggggatcgga tcgccgattt
     3061 atttccgtcg cttgcaggtg gggcaggtca tcgcatacga cctgtcgagc gatggcacgg
     3121 cgatgaacat caagattttt gtcaatgcgc cttacgacaa gtacgtcaat gcggacacac
     3181 gcttctggaa cgcgagcggc atcgacgtct cgttgggcgc gggtggtttg gacgtgcgca
     3241 cgcaatctct cgtcgcggtg ctcgctggcg gtctcgcctt cgacacgccg tccatcgccg
     3301 ccaaggctgc gcccgcagcc gcgaatacgg tcttcaccct ctacaatgac cagaccgctg
     3361 cgatgaagca accggacacc attgcggccc actatgtgct ctatttcaac gaatcgcttc
     3421 gcggtctttc ggtgggcgca ccggtcactc tgctcggcct gccgggcggc gaagttaccg
     3481 ccattggcct cgccatcgat ccgaagactt tcaacattcg tggtcgcgtg gagattgcca
     3541 cgtatcctga gcgcttgatt gcgcggttga acgtaaaaca agcggctgca ggcgaagaga
     3601 tagtgcggag tctgcgggag cgccacgcgt ttatgcaacg tttagtcgag cagcgaggac
     3661 tgcgcgccca gctccggagc ggcaacttga tcaccggaca actctttgtc gcgctcgatt
     3721 tctaccccaa cgctcccaaa caaaaagttg actggaatca ggatccggtg gagctgccgg
     3781 tggttccaag caccgtttcg gacatcgagg caaagctcac cggcatcgtc gcgaagcttg
     3841 acaaattgcc gcttgaagcg attggcgacg acctgagaaa agcgctcgtc tccctcgacc
     3901 agacgctaaa ggatgcgggc aaggccgtga accgcatcga cggcgaggtt acgcccggct
     3961 tgaagacgac actcgacgat ctgcggggca caattggtgt ggtcgaccgc gtgctcaaca
     4021 acgcgaacgc gaccctcgtc ggcaaggacg ctcccgccca gcaggaactg cgcgacgcgc
     4081 tgca
//
LOCUS       DATILV010000933         3393 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2272778, whole genome shotgun sequence.
ACCESSION   DATILV010000933 DATILV010000000
VERSION     DATILV010000933.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3393)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3393)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3393
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2272778"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            13..171
                     /locus_tag="VLJ17_22470"
     CDS             13..171
                     /locus_tag="VLJ17_22470"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HSV25776.1"
                     /translation="MVSPVELLDHLYGHDHDKEVNVLEVLLGRLRRKIGADVIGTRRG
                     QGYYLKDQ"
     gene            172..1617
                     /locus_tag="VLJ17_22475"
     CDS             172..1617
                     /locus_tag="VLJ17_22475"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSV25777.1"
                     /translation="MAVKSLRIRLLAAAAIVVSLVLLLAGFALVVVFERNVVRSIDIE
                     LDAYLDQLASILVRDDNGHVTVDNELADPRFRQPYGGRYWQVSMDDSVLLRSRSLWDT
                     LLLVDQAPAPGAGILRQELAGPNRQVLYAAIRSVILEQEPTNRAEQVPPNPPEQQPQP
                     AVPEEAPVKPQDERYILVAAMDRAEVDNINAKFSGDIVPALGVFALLLIAAAWVQVSV
                     GLAPLEKLRTGLEAVRLGEARRLDAEVPSELQPLVAETNRLLEAQETALIKARARAGD
                     LAHGLKTPLTALTMLAEGLRSDGQHGLAQDIDHQLRGLGQHVERELARSRIAAGGLTA
                     RALLRPAVAGLVKTISKLPRGDGIDWRVDSPVGLSAAVDEVDLAEILGNLLDNARKWS
                     RSVVMVTARRRDREIEVLVEDDGSGIPEHERSRVLNRGIRLDERVPGTGLGLTIAKEI
                     AEAYQGRLELGNSEIGGLRVSLVLPAPDKSI"
     gene            complement(1639..2283)
                     /locus_tag="VLJ17_22480"
     CDS             complement(1639..2283)
                     /locus_tag="VLJ17_22480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004125521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV25778.1"
                     /translation="MSDAIRIAVIDDHPMFREGAVQTLTCVDGIEVVGEGATADDALK
                     VAEELRPDVMLLDIGLPGGGVQAAANIARACPGVRAVMLTASESELDVASALQAGARG
                     YILKGSSGAEVVETVRAIFRGESYVAPSLAARLLIQMGKRTEVATSKPANDLTAREEE
                     ILSLVSSGMTNKEIANRLNLTERTVKHHMTSIMRKSNVRNRVEAMLKFRRNADG"
     gene            2866..3324
                     /locus_tag="VLJ17_22485"
     CDS             2866..3324
                     /locus_tag="VLJ17_22485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HSV25779.1"
                     /translation="MNSRDIGLTQAFTAPGAVRKHHARRSGARLGFTLIEVVVALAVV
                     ATLLTAIGAVVTVSSRGTRSLEQHLALVETTRIVAATLPRAEEITLDGLSGETLGHRW
                     RVGISPFVGGGISLVPNSPWIPQTVVVRVRSPSGAVYGFETVRLQRRPVQ"
BASE COUNT          655 a         1040 c          993 g          705 t
ORIGIN      
        1 cgctgcggcg cagtggtcag cccggtcgaa ctgctcgatc acctctacgg ccacgaccac
       61 gacaaggagg tgaatgtcct tgaggtcctt ctcggccggt tgcgtcgcaa gatcggtgca
      121 gatgtgatcg gcacacgccg cgggcagggt tattacctga aagaccagtg agtggccgtc
      181 aagtcactgc gaattcgcct gctggcggcc gctgcgatcg tcgtcagctt ggtactgctg
      241 ttggccgggt tcgcgctggt ggtggtgttc gagcgcaacg tagttcgctc gatcgacatc
      301 gaactcgatg cctatctcga tcagcttgcc tccatcctcg tacgcgacga caacggacat
      361 gtaacggtcg acaacgaact cgccgacccg cgctttcgcc agccctatgg cggccgttac
      421 tggcaagtct ctatggacga cagcgtactc ctgcgatcac gctccttgtg ggatacgttg
      481 cttctggtcg accaagcgcc ggcccccggc gccggaatct tgcgacagga gttggccggc
      541 cctaatcgcc aagtgctcta tgcggcaatc cggtccgtca ttcttgagca ggaaccgacg
      601 aatcgagcag agcaggtccc ccccaatccg ccagagcaac agccgcaacc ggcggtgccg
      661 gaagaggcgc cagtcaagcc gcaagatgaa cgctacatcc ttgtggccgc aatggaccgc
      721 gctgaggtcg acaacatcaa tgcaaaattc agcggcgaca ttgtcccggc acttggcgta
      781 tttgcccttt tgcttatcgc cgccgcctgg gtccaagtat cagtgggact tgcgccgctc
      841 gaaaaactcc gaaccggatt agaggcggtc cggctggggg aggcgcgccg cctggacgcc
      901 gaagtgccct ccgagctgca acctctcgtg gctgaaacga accgcctgtt ggaggcgcaa
      961 gaaaccgcgc tgatcaaggc gcgcgcacgc gcgggcgacc tggcgcacgg gttgaagact
     1021 ccactcactg ccctgaccat gttggcggag ggactgcgca gcgacggaca acacggattg
     1081 gcgcaggaca tcgatcatca gctcagaggc ctcggccaac acgtcgaacg cgagctcgca
     1141 cgttctcgaa tcgccgcggg cgggctaacc gcccgtgccc ttcttaggcc ggcagtggcg
     1201 gggctggtga agaccattag caagctcccg cgcggcgacg ggatcgactg gcgggtcgac
     1261 agccccgtcg gtctgtccgc cgcggtcgat gaggttgatc ttgccgaaat cctcggcaat
     1321 ctgttggaca acgcccgcaa atggtcgcga tccgtggtca tggtgacggc gcgtcgccgt
     1381 gaccgcgaaa ttgaagtttt ggtggaggac gacggctccg gtattccgga gcatgaacgt
     1441 tcccgcgttt tgaatcgcgg catccgcctc gatgaacggg tgccgggaac cgggctcggc
     1501 ctgaccatcg ccaaggaaat cgccgaggcc taccagggaa ggctcgagct cggcaattcg
     1561 gaaattggcg ggctgcgggt gtcgctagtc ttgcccgctc ctgacaaatc aatttgactg
     1621 ataatccaag ctccgagttc agccgtcggc gttgcggcga aacttcaaca tggcctccac
     1681 gcgatttctt acattggact tccgcatgat gcttgtcatg tgatgcttca cggtcctctc
     1741 ggtgagattg agacgatttg cgatctcttt gtttgtcatg ccactcgaga caagcgaaag
     1801 gatttcctcc tcgcgagcgg tcagatcatt tgcgggttta ctagtggcaa cctcggtccg
     1861 cttgcccatt tgaatgagca accgcgcagc caggctcggc gccacatagg attcgcccct
     1921 gaagatagcg cggaccgtct cgaccacctc ggcgccactg ctccctttca ggatgtagcc
     1981 ccgcgcaccg gcctgcagcg ccgacgcgac atccagctca ctttcggagg cggtgagcat
     2041 aacggcccgc acgcccggac acgcccgcgc aatgttcgcc gccgcttgaa caccgccacc
     2101 gggcaggcca atatcgagga gcatgacgtc tggccgaagt tcctcggcga ccttgagggc
     2161 gtcgtcggca gttgcaccct cgccaacaac ctcaatgcca tcgacgcaag taagcgtttg
     2221 cacagcgccc tcgcgaaaca tcggatgatc gtcaatgacg gcgatgcgga tcgcgtcaga
     2281 catctagatc tccatgatca ggaaactggt ggaaatggcc gctttgtcga tggatcgcgt
     2341 ttgagggcta gcttgttaaa agtccaatgc gattggcggt ttgctgaaca cacctcccgt
     2401 tgttgtgctt gcgctccggg gtcatcgctg gcactccttc ccccaccgtt gggttttgct
     2461 cgggtctctc tttttccacc aaaccgccct ctaattgacc atagaaaaat cttatgtcgg
     2521 cctgatgtca agcaagcttg gttcccagag acattttaat atcattttat cttttttaaa
     2581 acattttttt gccttctttc ggggcggtaa cgcacgattg aaattgcttg acattgccgt
     2641 agtacctcgt gcggctgcgc accggctatg accgcccgga caaaaggact ctgcggcccc
     2701 acagcttttt ccgccatatc accatctatt tgtagccaca caattatcct ccagttgccg
     2761 ccgccaaccg aagcatctag aattgggtct tccgagcact ccggttgcgg caacacccca
     2821 cgacaacgac tggacgccca ttcaaacaaa aatgtcgggg tcgttatgaa ttcgcgagat
     2881 atcggtctga cacaggcatt cactgcgccc ggcgcggttc gcaaacatca cgcaaggcgc
     2941 tcgggcgccc gcctgggatt cacgctgatc gaagttgtgg tggcacttgc ggtcgtggcg
     3001 acattgctga cggcgatcgg cgcagtcgtg acggtgtcat cgcgcggtac gcgttcgctt
     3061 gagcaacatc tggcgcttgt cgaaacaacc cggatcgtcg ctgccacact gccgagggcc
     3121 gaggagatca cgctcgacgg tctgtcggga gaaactttgg gccaccggtg gcgcgtcgga
     3181 atctcgccct ttgtcggcgg cggaatcagt cttgtcccca actcgccatg gattccacaa
     3241 accgtcgtgg tgcgtgtgcg gtctccttcc ggcgcggtct acggattcga gaccgttcgt
     3301 ctgcaacgtc ggccagttca atgaaacgct tgcatcgaca taggcgctcc aaggttgggc
     3361 gctccaaggt tgggcgctcc aaggttgggc gct
//
LOCUS       DATILV010000934         2807 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_5082120, whole genome shotgun sequence.
ACCESSION   DATILV010000934 DATILV010000000
VERSION     DATILV010000934.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2807)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2807)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2807
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5082120"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(394..2133)
                     /locus_tag="VLJ17_22490"
     CDS             complement(394..2133)
                     /locus_tag="VLJ17_22490"
                     /inference="COORDINATES: protein motif:HMM:NF020976.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase D family protein"
                     /protein_id="HSV25780.1"
                     /translation="MIDISPLRAIFIGAAASVAACLIDPAVPLAATAFSGVAAGDMSA
                     NDAILWTRTVESATSQPVASALTAQLADKPEFRNVLFTYKGMTDSARAGTVKIVASGL
                     KSHTRYFYRFVSDDGAVSPTGQFTTAPRDDEKVAIRFAFSGDAHGAWRPFPLVRGFGD
                     LKLDYFVFLGDTMYESASQGSPPAVDPFVDPLQALADYRRKYLENIQPVKPGGFPGLQ
                     AMFAAQGNYTLLDNHELGNAQFQSGGAPPGNPPGAGVDAANPANDVNASCDFINRTPG
                     FSALLQAYLNFQPVRERPVSAPGDCRSDGSWQLYSAQRWGANSIFINVDDRSYRDLQV
                     TGTRADNPARTMLGATQLAWLQRTLLDAQKQGVTWKIVAISSPIDQVGPFGPLFPWDG
                     PKTWIGSYRAERTRLLKFIADNNINHVVFLTTDDHLNRVLELNYLADPTDPKSRRPVP
                     GAFTVVAGPIGAVAPDKFTEHGFAAIKSVADKLAADERAAGIEPIGLRPNFPGLKQVY
                     REGDPEADAIRQPVDFYSPDTFNYATLEISADGKSLAVDTWGINSYPPNSFPEPAEIA
                     APRRILGFRIDAD"
BASE COUNT          521 a          823 c          909 g          554 t
ORIGIN      
        1 cgaaatcaca gcgatcctgc gccgatcctc gggcctcggc gacgcacgcg tcaggatgac
       61 agcttctggc actgacgaga acgtcgattg agcaacgggc tctcctggtt gtagaggttg
      121 acaggatggc tcggcggaaa gccttcagcc cgtcgtgacc cgtagctgcc cttcgcgaca
      181 actgcggcga acggccgaga tgggtgggga gcggtcatag gcgtcggctg ctggcgaaaa
      241 cgctcgggtc acgcctacgc gtcgagtagc gtcttcaaag ctagaaatcc aggttcaata
      301 aaaaatggct cggtcgatcc gcgtggtggt ggtgatgaat tgggcagcag gtccaagtag
      361 ggcctcgaat agctttcccg agccgtccga ggatcaatcc gcgtctatcc ggaagccgag
      421 aatacggcgg ggcgcggcaa tctcggccgg ctcgggaaag ctgttcgggg gataggaatt
      481 gatgccccag gtatcgactg cgagcgattt gccatcggcg ctgatttcga gcgtggcgta
      541 attaaaggta tccggcgaat agaaatccac cggttgacgt atcgcgtcgg cctccggatc
      601 accttcacgg tacacttgtt tgaggccggg gaaatttggt cgaagcccga ttggctcgat
      661 gccggcggcg cgctcgtcgg ctgcaagctt gtcggccacc gatttgatcg ccgcaaagcc
      721 atgctcggtg aatttgtctg gcgcaacggc gccgataggg ccggcgacga cagtgaaggc
      781 gccgggaacc ggcctgcggc ttttcggatc ggtcggatct gcgaggtaat taagctccag
      841 cactcggttc aaatgatcgt cggtggtcag aaagacgaca tggttgatat tgttatcggc
      901 aatgaatttg agtaaccggg tgcgctcggc tcgataactg ccgatccagg ttttcgggcc
      961 atcccacgga aagagcggtc cgaatggacc tacttggtcg atcggcgatg aaatagcgac
     1021 gatcttccag gtgaccccct gtttctgcgc atcgagcagg gtgcgctgga gccaggcgag
     1081 ctgcgtcgcg ccaagcattg tccgcgccgg gttgtcggcg cgcgtgccgg tcacttgaag
     1141 gtcgcgatag gaacggtcat cgacattgat gaagatgctg ttcgcgcccc agcgctgagc
     1201 ggaatagagc tgccagctac cgtcgctgcg gcagtcgccg ggggcggaaa ccggccgctc
     1261 gcgcaccggc tggaaattga gataggcctg cagcagagcc gagaaacccg gcgtccggtt
     1321 gatgaaatcg caggaagcat tcacatcgtt ggcaggattg gcggcgtcga cccccgcgcc
     1381 gggcgggttg cctggcggcg cgccgccgct ttggaattgc gcgttcccga gctcgtggtt
     1441 gtcgagcagc gtatagttgc cttgggcggc aaacattgct tgcagaccgg gaaacccacc
     1501 cggtttgacg ggctggatgt tctccagata tttccgccga tagtcagcaa gggcctgcag
     1561 gggatcgacg aacgggtcga ccgcgggggg cgaaccttgg ctcgccgatt cgtacatcgt
     1621 gtcgccaagg aagacgaaat aatcgagctt aagatcgccg aagcctcgaa ccagcgggaa
     1681 ggggcgccac gcgccgtgcg cgtcgccgct gaaggcaaat cgaatcgcaa ctttttcatc
     1741 gtcgcgcggc gccgtggtga actgaccggt tgggctgacc gcaccgtcgt ctgaaacaaa
     1801 acggtagaaa taacgcgtgt ggctcttgag gccgctcgcg acgatcttga ccgtcccagc
     1861 acgcgcggaa tccgtcatgc ccttgtaggt gaagagcacg ttccgaaact cgggcttgtc
     1921 ggcaagctgc gcggtcagtg cggaggccac gggttggctg gtggcggact cgacggtccg
     1981 cgtccacagg atcgcgtcat tcgcgctcat gtcccccgcc gcgacgccgc tgaatgccgt
     2041 cgctgcaaga gggacggcgg gatcgatcag gcaggccgca acgctcgcgg ctgccccgat
     2101 aaagatcgct cgcaatggtg atatgtcgat cactctttgc ctcccggctc gccgacgcca
     2161 gtgtcaaccg acgttccacc ggattcccgg tgattgtgcg gccaggatcg ccctcttgag
     2221 cgttttcgac aacgggaaat gccgcgtgca ccatacgttc aaaccaacca tttagcggcg
     2281 ccgaggcgct ggaacgggct gctgtggcag cgtcaaagca cacctttgct gtcgtcgcct
     2341 gcctcatcta gtccattcgc ccttcagatc gggccggccg cggcggcagc cgggcgatca
     2401 gcatcaggat ttcttcgccg attgtccgat gtgggtcgat ttgacccgtt catccgccgg
     2461 cattcgaacg atcggaatcg gcgcatcctt cccgttcctg ctcgctccgg cggaggtcgg
     2521 ctaactgaac ggacacctgc cgttcagcct agtcggcggg aacgggtcaa agtggtagag
     2581 tcgagatgtg gcgcggtggc ggtaggctga gcatatcggt tgccgcccct ttcgtctggc
     2641 ggtgcctcac tggctgagcc atggccccgt ttccacatcc accgggtcac cggaggcggt
     2701 cgcccgcccc cggttcccac agaacgtggc gtgcggattt cccgcaccaa cgctcttcgg
     2761 cagttgcttc acagcacttc gctgctattt gttcaagttt cgtttcc
//
LOCUS       DATILV010000935        11309 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1001659, whole genome shotgun sequence.
ACCESSION   DATILV010000935 DATILV010000000
VERSION     DATILV010000935.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 11309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11309
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1001659"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1005)
                     /locus_tag="VLJ17_22495"
     CDS             complement(<1..1005)
                     /locus_tag="VLJ17_22495"
                     /inference="COORDINATES: protein motif:HMM:NF024882.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
                     /protein_id="HSV25781.1"
                     /translation="MSSAERSHYGGSFLSDDFHTAIRRRLRELGGFVLFAAVGIVVVA
                     LATWSVNDPSLSYATSAPVRNLLGATGAIAADLAMQLFGVATIAIILPPAFWGWRLFT
                     HRILDRLRWRMVAWIGGLTLSAAFASCLTRPPHWPLPTGIGGVTGDALLRVIATIAGG
                     PLHSAGQTFAATIFGTLAFLAVAIASGFGLHQTEDEDEHAGSISIGWLVHAFLSLETR
                     AIRSFVQLYRIARPGVIAIFGRPVSREWPRAEPRLGKRNGDADEPSQHKEDDHEAQTE
                     TLQAPKTSRKTGRSDRKSADGYTLPAINLLAAPKASERAAPSMEAIRENATALEHVLS
                     D"
     gene            complement(1086..2303)
                     /locus_tag="VLJ17_22500"
     CDS             complement(1086..2303)
                     /locus_tag="VLJ17_22500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSV25782.1"
                     /translation="MSMKSAERELSVSTGRIGDTRSPFVRLAELIADITPGKPVIDLG
                     IGEPKHGVPAFVATVIAAHITEFGRYPRNEGTPQFRQAVAEWAARRYKLGRVPDPNRE
                     VLVLNGSREGLFLGAIAARRHVANRVGRPAILVPNPFYAAYSAGAAAADCEVVYLPAT
                     RETGFLPDLDALDAALLRRTVAMFLASPSNPQGAVADLTYLQRVVAMARRHGFLLFSD
                     ECYSEIYTQSAPPGALEAAGGKFENVVLFQSLSKRSNLPGLRVGFVMGDRHFIAKFLE
                     LRSVAAPQVSIPAQEVAVAAYQDEVHVDANRSLYREKFDLADQIIGNRYGYHRPAGGF
                     FLWLDVATFGGSEVVAAKLWQEAGVRVLPGRYAARDQDDGSNPGADYVRVAMVHDKET
                     TAEALHRIVAVLG"
     gene            complement(2502..3737)
                     /locus_tag="VLJ17_22505"
     CDS             complement(2502..3737)
                     /locus_tag="VLJ17_22505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008519 - ammonium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0072488 - ammonium transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HSV25783.1"
                     /translation="MLTSMAIVLMMTIPGLALFYGGMVRKKNVGDTVMTSFAITCLIS
                     ILWLFFTYSLAFREGGEIFGVDMGWFIGGFDRAGLQSIMSDIANNKGNPNSLAPTIPE
                     AVYSMFQLTFAIITAALIAGSFAERMKFSAMLWFIGLWAIFVYSPIAHWVWGPDGMFN
                     WSNPHAFLNVLDFAGGTVVHVNSGTAGLMVALMLGKRTDTGPAHNMVLTMIGASLLWV
                     GWFGFNAGSAVTAGLQAGMAMLVTHTATATAGFTWMIVEWIMKGKPTVIGICSGAVAG
                     LVAITPASGFVGPMGSFWIGIAAGVVCYWGCTSLKAMFGYDDALDAFGVHAVGGATGA
                     LLTGVFAVQQYGGNAGLLEGNPMQVVNQAIGIGVVFIYDCVVTLIILKVVDIFIGLRV
                     SKDIERDGLDLTLHGETVQ"
     gene            complement(3983..4111)
                     /locus_tag="VLJ17_22510"
     CDS             complement(3983..4111)
                     /locus_tag="VLJ17_22510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25784.1"
                     /translation="MKLVVAVIKPFELGRIGNGQVFVLDLQSAVRTCAGKTDAAAI"
     gene            complement(4588..4725)
                     /locus_tag="VLJ17_22515"
     CDS             complement(4588..4725)
                     /locus_tag="VLJ17_22515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25785.1"
                     /translation="MPTELRKRRKREQADLERYGFWQDGLMFIGLFLLGVIIARWLWG
                     G"
     gene            5098..5283
                     /locus_tag="VLJ17_22520"
     CDS             5098..5283
                     /locus_tag="VLJ17_22520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25786.1"
                     /translation="MVWTFARDSQPAFPAVACLQIVPVDDAIEAIVQTRCEGAKDACD
                     AVVAKANGKDWSNLFGN"
     gene            complement(5394..5897)
                     /locus_tag="VLJ17_22525"
     CDS             complement(5394..5897)
                     /locus_tag="VLJ17_22525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25787.1"
                     /translation="MKTLFGTVFGAAMLASAGGALAAGGYLQASSEEDQIVKEANKPQ
                     LVTMASTDAAKGIKNNKGTVILDQTGTYFTIVGVQVGSRGGTGLVRLWFQTNGKDVDN
                     SNCEQMIPNPEFTTVMISQGVGEYKKGDKVNAMISGSAPGIGLVYKKPTGEPAVPSVI
                     FSAWKID"
     gene            complement(6418..7629)
                     /locus_tag="VLJ17_22530"
     CDS             complement(6418..7629)
                     /locus_tag="VLJ17_22530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008519 - ammonium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0072488 - ammonium transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HSV25788.1"
                     /translation="MLTSVALVLMMTIPGLGLFYGGMVRKKNVGDTVMTSFAVTCLVT
                     VLFACLTYSLAFTAGNPYIGGLSRAFLQDIVSDVAKSVGNPNSLAPTIPETVYMCFQM
                     TFAIITPALIAGAFAERMKFSSMLWFIGLWAIFVYAPIAHWVWGPDGFLNSANADGLI
                     KVLDFAGGTVVHVNSGTAGLMCALCLGKRQDTGPPHNMVLTFIGASLLWVGWFGFNAG
                     SAVTAGLQAGMAMTVTQIATATAALAWMFVEWAMRGKPTVVGICTGAVAGLVAITPAS
                     GFVGPAGSLAIGAAAGLVCYWGCTGLKHLFGYDDALDAFGVHAVGGAAGAILTGVFAI
                     EQYGGTAGLIEGNAPQFLNQIYGVAIVFGYDAIVSLAILKLIDWTIGLRVTKEIEVEG
                     LDITLHGEVVQ"
     gene            complement(7869..8207)
                     /locus_tag="VLJ17_22535"
     CDS             complement(7869..8207)
                     /locus_tag="VLJ17_22535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HSV25789.1"
                     /translation="MKIVMAIIKPFKLDEVRDALTAIGVHGMTVTEVKGYGRQKGHTE
                     IYRGTEYAVSFLPKLKVEVAIATDQAEKAIEAITAAAKTGQIGDGKIFVFGLEQAVRI
                     RTGETDAAAL"
     gene            complement(8553..8891)
                     /locus_tag="VLJ17_22540"
     CDS             complement(8553..8891)
                     /locus_tag="VLJ17_22540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018323564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HSV25790.1"
                     /translation="MKLIIAVIKPFKLDEVRKALTGLGVSGMTVTEVKGYGRQKGHTE
                     IYRGAEYTVNFLPKLRVEVAVSGEQVDRAVEAITAGARTGQIGDGKIFVTALDHAVRI
                     RTGETNSDAL"
     gene            complement(9110..9982)
                     /gene="tesB"
                     /locus_tag="VLJ17_22545"
     CDS             complement(9110..9982)
                     /gene="tesB"
                     /locus_tag="VLJ17_22545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA];
                     GO_process: GO:0006637 - acyl-CoA metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase II"
                     /protein_id="HSV25791.1"
                     /translation="MSSSLLDLLAILDLEPIEVNLFRGRSPQVGWQRVFGGQVIGQAL
                     VAACRTVEGIADRPPHSLHAYFLLAGDPKVPIIYEVDRIRDGRSFATRRVLAIQHGRA
                     IFAMSVSFHGIEAGLSHQAEMPKVPGPESLPSEVEIRQRILPMMPDPIRRYFERERPI
                     ELRPVEFERYLGKKFPEGRFNVWIRATGVLPEAAAIHQCVLAYASDLTLLDSALIPHG
                     RTVFERTLMAASLDHALWFHRPFKADEWLLYAQDSPNASGARGFARGLIFTQDGTLVA
                     SVAQEGLLRERHQR"
     gene            10151..>11309
                     /locus_tag="VLJ17_22550"
     CDS             10151..>11309
                     /locus_tag="VLJ17_22550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016709 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen, NAD(P)H as one donor, and incorporation
                     of one atom of oxygen [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis hydroxylase"
                     /protein_id="HSV25792.1"
                     /translation="MPTFSNDCSDVVIAGGGFAGFTLAIALSQSLGEKFVVALADPEI
                     RQTVQDVRASAIAAAPRRMFDALGVWAAVAEEAQPILDMAVTDSRVNDAARPVFLTFG
                     GDIEPGEPFAHMIENGQLVAALATKAASAGVVLHAASVNDFTAHPSYLNVVLGDGTEI
                     RTKLLVAADGARSRLRERAGIAIHGWSYGQSAIVTTIAHERDHHGRAEEHFLPAGPFA
                     ILPLRHNRSSIVWTEQTEEADRMIALRDDDFHRELEKRFGLRLGDIAIVGPRRAYPLG
                     LWVARSFIADRLALVGDAAHVIHPIAGQGLNMGLRDVAALAEAVVDAARLGLDPGDAT
                     VLERYQRWRRFDTMTMSVSTDGLNRLFSNRSDVLRLVRDLGLGVVDRLPALK"
BASE COUNT         2361 a         3402 c         3316 g         2230 t
ORIGIN      
        1 gtcagaaaga acatgctcaa gggccgtcgc gttctcgcga atcgcctcca tgctgggcgc
       61 ggctcgttcc gacgccttcg gtgctgctaa cagattgatc gcgggcaatg tgtatccgtc
      121 ggcggatttg cgatctgatc gtccggtttt ccggctcgtt ttgggcgctt gcagggtctc
      181 tgtctgcgcc tcatggtcgt cctccttgtg ctgcgacggc tcgtccgcat cgccgttgcg
      241 cttaccgagc cgcggttcgg cgcgcggcca ttccctcgac actgggcgac cgaatattgc
      301 aataacgcca ggtcgggcta ttcgatacag ttgaacgaac gaccgaatgg ctcgtgtctc
      361 caaacttagg aaagcatgga cgagccaccc gatagatatc gaaccggcat gctcgtcttc
      421 atcttcggtt tggtgcaaac cgaagcctga cgcgatggcg acggccagaa acgcgagggt
      481 gccgaatatt gtcgcggcga atgtctgtcc cgcgctatgc agaggcccgc ccgcaatggt
      541 ggcgatcacg cgcagcaaag catcgcccgt gacgccccct atgccggtgg gcagcggcca
      601 atgggggggg cgggtcaggc acgatgcgaa cgcggctgat aacgtgaggc ccccgatcca
      661 ggcgaccatg cgccagcgca agcggtcgag gatgcggtga gtaaagagcc gccagcccca
      721 gaaggccggt ggaagaatga tcgcaatggt ggcaactccg aaaagctgca tcgcgagatc
      781 ggcggcgatc gcgccggtcg cgcctaagag gttgcgtact ggagcgctgg ttgcgtagct
      841 taggctagga tcgttgaccg accaggtcgc aagtgccacc accacaatgc cgaccgcggc
      901 aaacagcacg aacccaccga gctcgcgcaa acggcgtcgg atcgccgtat gaaaatcgtc
      961 cgacaggaac gatccgccgt agtggcttcg ttcggccgat gacatcgcca ccttgaaggc
     1021 cccacaccgc gtgcatccac gcaagtttaa gaaactgttc gcgttatgcg accagttcga
     1081 aagacttatc caagcacggc gacgatgcga tgtaacgcct ccgccgtggt ctccttgtcg
     1141 tgcaccatgg cgactcggac atagtccgca cctggattgc tgccgtcatc ttggtcacgt
     1201 gccgcatagc ggccaggtaa gacccggaca cccgcctcct gccacagctt tgcggcaacg
     1261 acttcgctgc cgccaaaggt tgcgacatcg agccacagga agaatccgcc ggccggccgg
     1321 tggtaaccat agcgatttcc gatgatctga tccgcgagat cgaatttctc gcgatagaga
     1381 gatcgattgg cgtcgacgtg aacctcgtcc tggtaggccg caacggccac ctcctgtgca
     1441 ggaatcgaca cttgcggcgc cgcaacgctg cgcagttcaa ggaacttcgc gatgaagtga
     1501 cgatcgccca tgacaaagcc tacgcgtagc ccgggcaaat ttgagcgctt ggagagcgat
     1561 tgaaacaaaa caacattttc gaacttgccc ccagccgcct cgagtgcgcc cggcggcgca
     1621 gattgcgtgt agatttccga atagcactcg tccgaaaaca acaggaagcc atggcgtcgc
     1681 gccattgcga cgacgcgttg cagataggtc aggtcggcaa ccgcgccctg tggattggaa
     1741 ggcgaggcga gaaacatcgc gacggtacgc cgaagcagtg ccgcatcgag cgcgtccaaa
     1801 tcaggcagaa agccggtctc acgcgtcgcc ggcagataga cgacctcgca atcagccgct
     1861 gccgcgccgg ccgaataggc ggcataaaaa ggattgggga cgaggatcgc tggtcggccg
     1921 acgcgattcg ccacatgacg cctggctgcg atcgcgccga gaaaaaggcc ttcacgcgag
     1981 ccattgagca ccaggacttc gcggttcggg tcagggaccc ggccgagctt gtaccggcgc
     2041 gcagcccact cggcgaccgc ctgacggaac tgcggcgtcc cctcgttcct gggatagcgt
     2101 ccgaattcag tgatatgcgc ggcgatcacg gttgccacaa acgccggtac accgtgcttg
     2161 ggctcgccga tgccgaggtc gatcaccggc ttgcccggcg tgatatctgc gatcagctcg
     2221 gcaaggcgca caaaagggga acgtgtgtcg ccgatccgac cggtcgagac ggaaagctcg
     2281 cgttcggcac ttttcatgga catccgcttg cacggccgaa tccgccgcct ccttggacca
     2341 tagaagcggt gaggttaaga cgcgattaac catcgggggt caatcggcaa ggggggcaaa
     2401 aagaaaatta ctctaaaaaa cgaaaaggcg tgaggcctat cctggcgggc ctccaagata
     2461 acaggggggc gccatcgtgg cgcccccctg gcggtcggcc ctcactgcac ggtttcgccg
     2521 tggagcgtca gatcgagacc atcgcgctcg atgtccttgg acacgcgcag cccgatgaag
     2581 atatcgacga ccttgaggat gatcagcgtc acgacacagt cgtagatgaa cacgacgccg
     2641 atgccgatgg cctggttcac gacctgcatt ggattaccct caagcagacc cgcgttgccg
     2701 ccgtattgtt ggacagcaaa cacgccagtg agcagcgcgc cggtagctcc gccgaccgca
     2761 tgcaccccga aggcatcaag cgcgtcatcg tagccgaaca tggccttaag gctagtgcag
     2821 ccccaatagc acacaacgcc ggccgcgatg ccaatccaga acgaacccat cggaccgacg
     2881 aaccccgagg ctggcgtaat agctacgaga ccggctacgg cgcccgaaca gatgccgatc
     2941 acggttggct tgcccttcat gatccactca acgatcatcc aggtgaaacc cgcggttgca
     3001 gtcgcggtgt gggtgaccaa catcgccatg ccggcctgca ggcccgccgt gaccgcggag
     3061 ccggcgttga agccgaacca gccgacccac agcaaggaag cgccaatcat tgtcagcacc
     3121 atgttatggg ccggaccagt gtcggtgcgc ttgccgagca tcagggcaac catcaggccg
     3181 gctgtacccg aattaacgtg caccacggtg ccgcccgcga aatccagcac gttgagaaag
     3241 gcgtgggggt tggaccagtt gaacatgcca tccggccccc acacccagtg ggctatcggc
     3301 gagtagacaa agatcgccca taggccgatg aaccagagca tggccgagaa cttcatgcgt
     3361 tccgcaaacg agccggcgat gagcgctgcc gtgatgatcg cgaaagtcag ctggaacatc
     3421 gaatagacgg cctcaggaat cgtcggcgct agagaattgg gattaccctt attgttggcg
     3481 atgtcgctca taatgctctg caggccggca cggtcaaacc ctccgatgaa ccaccccatg
     3541 tccacgccga agatttcacc gccctcccgg aatgccaggc tgtatgtaaa gaacagccaa
     3601 aggatgctta tcaggcaggt gatggcaaag ctcgtcatca cggtgtcgcc cacgttcttc
     3661 ttgcgcacca tgccgccgta gaacaaggcg agccccggaa tggtcatcat aagcacgatg
     3721 gccatcgagg tgagcatcca ggcggtatcg cctgaattgg gcgagcattc tttttggacc
     3781 ttggaatcac acggcagcgt ctcgacggtc acgccggagg actcggcggc gggtgcctgg
     3841 tcctgggcgt ggatcggcgt ggagaaagag acggtaaggc agaggccgag caggactccg
     3901 aaaatgagag ccacgagtcc cgcacgttta gggttcttga ttgtcatggt gttgctcctg
     3961 tcagaggtga aggtgcgggt tctcaaatcg ccgcagcgtc ggttttgccg gcgcaggtgc
     4021 gcacggcgct ttgaaggtcg agaacgaaga cctggccgtt cccgatccgg ccgagctcaa
     4081 aaggcttgat gacggctacc acaagtttca tgggctcccc ctaagcgccc gacccgcggg
     4141 gtgcaggtcc ggcggtctca acagagcttc gctgcgcgaa gtctgaggcc ccgcgagcaa
     4201 tgccgcggtt tcaggaatca aacggcgtgc caagtcgtcg gcccaaatgg aggaattccg
     4261 acctaagacg cggaaattct aaatgatcgt ggcaaacacg caccacggtt gcaccgattt
     4321 tgatcaggat gccgacactt gagtcgcggg gttccgagag cggccgacaa cctgtcgtaa
     4381 agagcggcgg ggcgaaattg gagtttctgg cgcgttttgg tacgcgtatc ggtcacttag
     4441 ggctcggcgc ctctcgcttg cagctttgtt tggttgaagt ctgccggcag cctgaaaggc
     4501 tgcacagaat ttgatctgaa tgccgagatt ttaggccacc gacttccgag agcgactgcg
     4561 gttagggaag ccttatcgag ccataaatca gcccccccaa agccacctcg cgataatcac
     4621 gccaagcaaa aataacccga taaacatcaa gccgtcttgc caaaacccat aacgctctaa
     4681 atcggcctgc tcgcgcttgc gacgcttacg caactcggtc ggcatatcgc cctcgttgcc
     4741 cgaatggggt ttgcagccgc taatctaatt gacgtccacc ttttgtaatg gccaaaccga
     4801 cctgcgatta tgcggcaaat cggtattgat tttctcccgc cctactgggc ataacctttg
     4861 gacattcaaa atcggcctca cttcatgcca ctccaggcga gacggctaca caggtacgct
     4921 atcctgctgc cccagttcct ggggatcctt ttcgcgcccg ataccgcaag cgccgatcag
     4981 ctttgtggtc ggcaattcga ttcactggcg cagctctacg ccgatctccg cggcgaagca
     5041 gatcgcggtt ggcaagttat cgagcgctca acacatgtca catttgttgg gaatcagatg
     5101 gtttggactt ttgcccgcga ctcgcaaccg gcatttccag ccgtcgcctg ccttcagatc
     5161 gtaccagttg acgatgcaat cgaggcaatc gttcagactc gttgcgaggg cgcaaaagac
     5221 gcctgcgatg ctgttgtcgc caaggctaac ggcaaggact ggagtaatct gttcggcaac
     5281 tgacggcgta actgatattc ctcgatcgat tgcaacagcc cctcccggtt ggagcggacg
     5341 acagcaaggg gcgccgttac ggcgcgttac gacgcccctt gattgacggc gcctcagtcg
     5401 atcttccaag ctgagaagat cacgctcggt accgcgggct cgccggtggg cttcttgtag
     5461 acgaggccga tgcccggcgc agagcccgag atcatggcgt tgaccttgtc tcccttcttg
     5521 tattcgccca ccccctgcga gatcatgacg gtggtgaact cggggttggg gatcatctgt
     5581 tcgcagttac tgttgtcgac gtccttgccg ttcgtctgga accagagtct gaccaagcca
     5641 gtgccgcccc ggctgccgac ctggacaccg acaatcgtga agtaggtccc ggtttggtcg
     5701 aggatcaccg ttcccttgtt atttttgatg ccctttgcgg catcagtcga agccatggtg
     5761 accagctggg gcttgttggc ttctttcacg atctggtctt cctcgctcga ggcctgaaga
     5821 tagcctcccg ccgccaaagc gccaccggcc gaagccagca tggccgcccc aaacactgta
     5881 ccgaaaagag ttttcatctg taccctcccg ctggagttgg actacgcgaa aagagttcta
     5941 aagggcgacg gggcggcccc cgatcggtgt attgaaacac gatttggcgg gctgccccca
     6001 tgatcggcct ttgtgaactc cgctcagtgg agagcaaatg acatgccatt aaaaaggaac
     6061 cgccatcgac agcgatgacc tcagcgattg gttcacatcg cagggaatag aatctgtctg
     6121 gcgcggtcgg gattaaaacc cgcgctaaat tccaaatatc aagcatcggt cgactgccga
     6181 tgcttatttg ttcaccaagt gcccgatagt gatgcacgcc ccttttgttt gctgttattt
     6241 gcgccaacac aaaatgtgat catacctaaa tgaaagaggc cctggttttc accaggacct
     6301 ctccgtaacg gcgagggcga tgccgggtaa ttcaccccaa ccgtatgtca gctcgttcca
     6361 cggcaccgcc ttctgccgcc gaggagggca ctcgcgggcg acgccatagt tggcatatta
     6421 ctgcacgact tcaccgtgaa gtgtaatatc cagaccttcg acttcgattt ctttcgttac
     6481 ccgtaagccg attgtccagt cgatcagctt gaggatggcc agcgagacga ttgcgtcata
     6541 tccgaacacg atggccacac catagatctg attgaggaac tggggcgcgt tgccctcgat
     6601 gagtccggcg gtgccgccgt actgctcgat cgcgaacaca ccggtcagga tcgccccggc
     6661 ggcaccacca accgcgtgga cgccaaatgc gtcaagtgcg tcatcgtagc cgaacaggtg
     6721 cttgagaccg gtgcagcccc aatagcacac gaggccggcg gctgccccaa tggcaagcga
     6781 gccggcgggg ccgacgaagc ccgacgctgg cgtgatagcg acaaggccag ccaccgcacc
     6841 ggtgcagata ccgacaacgg tcggcttgcc acgcatagcc cattccacga acatccacgc
     6901 caaagccgcc gtcgcggttg cgatctgcgt caccgtcatg gccatgccgg cctgtaagcc
     6961 ggctgtcacg gctgacccgg cattgaagcc gaaccagcca acccacagca gcgaggcgcc
     7021 gatgaatgtc agcaccatgt tatggggtgg accggtatcc tgacgcttgc ccaggcagag
     7081 cgcgcacatc aggccagcag tgcccgaatt gacatgcacg acggtgccgc ccgcgaagtc
     7141 gagcaccttg atcagtccgt ccgcgttcgc cgaattcaga aagccatctg gtccccagac
     7201 ccagtgcgcg atcggcgcat agacgaagat cgcccacagg ccgataaacc acagcatcga
     7261 tgagaatttc atgcgctccg caaacgcgcc tgcaatcagc gccggcgtga tgattgcgaa
     7321 ggtcatctgg aaacacatat agacggtttc cgggatggtc ggcgccaatg aattgggatt
     7381 gcccacgctc tttgcgacat cgctgacgat atcttgcagg aacgcccgac tgagcccgcc
     7441 gatgtaagga tttccggccg tgaaggcgag gctgtaggtg aggcacgcaa acagcacagt
     7501 gacaaggcat gtaacggcaa agctcgtcat caccgtatcg ccgacgttct tcttgcgcac
     7561 cataccgcca tagaacagcc cgaggccggg tatcgtcatc atcagcacga gtgccacaga
     7621 cgtcagcatc cacgcggtgt cgccggaatt gggactacaa ttctgaagcg tcttggtgtc
     7681 gcaagccggc gttggggcat cggcagttgc cgccgcagcg ggttcggcgg atgctgccgc
     7741 tggtgcttgc gcgtacgacg agtggaaggt gggtaggctt aagaaagctc cgagtaggac
     7801 cgcgatgacg aatgcgacca gcccaacgcg cagaggaagt cttcgtgtca tggtttctcc
     7861 tgtccgcttc acagcgctgc ggcatccgtt tcgccagtgc ggatgcgcac cgcctgctca
     7921 aggccgaaaa caaagatctt gccgtccccg atttggcccg tcttggcggc cgccgtgata
     7981 gcctcgatgg ccttctcggc ttggtcggtc gcgatcgcga cctcgacctt cagcttcggc
     8041 aggaagctca cggcatattc ggtgccgcga tagatttcgg tatggccctt ttgacgcccg
     8101 taacctttga cttcagtgac ggtcataccg tgcacgccaa tcgcggtaag tgcgtcgcgg
     8161 acctcgtcga gcttaaatgg cttgatgata gccatgacaa ttttcatggg ttctttcccc
     8221 cgctcaggcc cattctgagt tcccagattg ggcgatctct acgcagcgat cccccagccg
     8281 gcacgttgcc atgtgaggga tcgccggcgt tcgggaatca aaccccgtgc cagttttgcg
     8341 gcaggccgca attttgttgg gttgcagcat tttgctcgcc ggaaggttga tcgaatcagc
     8401 catcaagcaa accgaccaaa gcttgggcag atttgcccgc gggcgaaagg tgattaacta
     8461 ataggcacga cgaaatcatg atagtccccg acgctgctcg cgccgccgtt tggcacgacg
     8521 ttggggtcat ggtgactcgc tatgttcgtt gattaaagcg cgtcgctgtt ggtttcgccg
     8581 gtgcgaatgc gcaccgcatg gtcgagcgcg gtgacgaaaa tcttcccatc gccgatttgt
     8641 ccggtccgtg ctccagccgt aatagcctcg acggcgcggt ccacctgttc cccggacacg
     8701 gcaacttcca cgcggagctt gggcaggaaa ttcacggtat attcggcgcc gcggtagatt
     8761 tctgtgtgcc ccttttgccg tccgtagcct ttgacctcgg taaccgtcat gccgcttacc
     8821 cccagccccg taagcgcctt gcggacttca tctaacttga atggtttgat gactgcgatg
     8881 atgagcttca ttgacgctcc ccttccctta cccccccagc aaactcgcat cacgcatcaa
     8941 ggggcgcgcc tccaccccgc atacctctat tgttcaaaaa ctatgccaaa tggcgcattt
     9001 gacggcaaag aatcactcgg tcagcagcat tactaggtgc ggtctccctt atcaactaaa
     9061 ctcgcgcgtt atgccctgac acgtcccgcg agatctgcac aatttttgat cacctctgat
     9121 gtcgctctcg tagcaggccc tcttgggcaa ccgacgccac cagcgtccca tcttgggtaa
     9181 agatcaagcc acgagcaaag ccgcgcgcgc cgctggcgtt gggactgtcc tgggcataga
     9241 gcaaccactc gtcggctttg aacggtcgat gaaaccacag cgcgtgatca aggcttgccg
     9301 ccatgagggt cctttcgaac acggtccgac cgtgggggat cagcgcggaa tcaaggagcg
     9361 tcagatccga cgcgtaggcg agtacacatt gatggatcgc cgccgcttcc ggcaacacgc
     9421 cggtagcgcg tatccaaaca ttgaatcggc cttcgggaaa tttcttgccg agataacgct
     9481 cgaattcgac ggggcgaagc tcgataggtc gttcacgctc gaaatagcgc cgtatcggat
     9541 ccggcatcat cggcaggatc ctttggcgga tctcgacctc gctcggaagc gattccgggc
     9601 caggcacttt gggcatttcg gcctggtggc tcagacctgc ttctatccca tggaaggaca
     9661 cggacatggc gaagatcgct cgaccatgct gaatcgccaa tacccgtctg gtggcaaagc
     9721 tgcgtccgtc acggatccgg tcgacttcat agataatggg gactttggga tcgcctgcca
     9781 gcaggaaata agcgtggagt gaatgcgggg gccgatccgc aatcccctcg accgtgcggc
     9841 aggctgcaac caacgcctgg ccaatgactt ggccgccaaa aacgcgctgc cagccgactt
     9901 gcggcgaccg gccacgaaaa agatttacct cgatcggctc aagatcaaga attgcgagca
     9961 gatccagcag tgaagaactc attgcacatc tcagcaggtc gaattgcggt gcgatgactt
    10021 gcggtttgtt cgccgaccgc cagtagtcac accttcgcaa gatatcggag tcaataggtc
    10081 gatggttagc gcccgaggtg ttagacttgg tccaactcag aactgcgagt tccgctgaaa
    10141 gctgccgaat ttgccaacat tctcaaacga ttgctcggat gtcgtgatcg caggcggcgg
    10201 atttgccggg tttacgctcg ccatcgcgct ctctcagtca ctcggcgaga aattcgtggt
    10261 cgcgttggcc gatccggaaa ttcgccaaac agttcaagat gttcgtgctt cagctatcgc
    10321 ggcggcgccg cgccgcatgt ttgatgcgct tggtgtttgg gctgcggtgg ccgaggaggc
    10381 gcagcccatt cttgacatgg cggtcaccga tagccgcgtt aacgatgcag cgcgaccggt
    10441 gttcctgacg ttcggaggtg atattgagcc aggtgaaccg ttcgcccata tgatcgaaaa
    10501 tggccagctg gtcgcggcac ttgccaccaa agctgcatca gctggcgtcg ttctccacgc
    10561 agcatcggtg aacgatttta ccgcccatcc atcctacctg aatgttgttc tcggcgatgg
    10621 cacggaaatc aggactaagc tcctcgtggc ggcggacggt gcgcgctcgc gcttgcgcga
    10681 gcgcgccggg atagcgattc acggctggtc atatggacaa tccgcaattg ttaccaccat
    10741 cgcccatgag cgcgatcacc acggtcgggc cgaagagcat ttccttccgg ccggcccgtt
    10801 cgcaattcta ccgctacgtc ataaccgctc ctcgattgtc tggaccgaac agaccgagga
    10861 agccgaccgg atgatcgctc ttagggatga tgattttcac cgtgagttag agaaacggtt
    10921 tggcctgcgg ctcggcgaca ttgcaatcgt ggggccgcgt cgcgcctatc cgctcggtct
    10981 gtgggtagca cgcagcttca tcgcggatcg gctcgccttg gtcggcgatg cggcgcacgt
    11041 gatccacccg attgccgggc agggattgaa catgggtctg cgcgatgtcg cagcgctcgc
    11101 cgaggctgtg gtcgacgcag cgcgtcttgg tttggaccct ggcgatgcca cggtcctgga
    11161 gcgctatcag cgctggcgcc gtttcgatac catgacgatg agcgtttcaa cggacgggct
    11221 caaccgcctg ttctcaaacc ggtctgacgt gctgcggctt gttcgcgatc ttggcctcgg
    11281 cgtggtggat cggttgccgg cgctcaagc
//
LOCUS       DATILV010000936         4612 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3304729, whole genome shotgun sequence.
ACCESSION   DATILV010000936 DATILV010000000
VERSION     DATILV010000936.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4612
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3304729"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            584..847
                     /locus_tag="VLJ17_22555"
     CDS             584..847
                     /locus_tag="VLJ17_22555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25793.1"
                     /translation="MTHMLLALGPPGRTVPYSLGLAREVQTRDESAWLRLPVSLSAAS
                     HDQGGRADFRTYVTAQTSSGAAARMKRRSSTGSGVFDFATPLP"
     gene            958..2280
                     /gene="benA"
                     /locus_tag="VLJ17_22560"
     CDS             958..2280
                     /gene="benA"
                     /locus_tag="VLJ17_22560"
                     /EC_number="1.14.12.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="benzoate 1,2-dioxygenase large subunit"
                     /protein_id="HSV25794.1"
                     /translation="MLHEDADKHIYQLDRAAFTDEQLFELELKYIFEGNWVYLAHESQ
                     IPNINDFLTVFIGRQPVVITRSRDGKLHALANTCTHRGAILCRHKKGNRSSFTCPFHG
                     WTFNNSGKLLKVKDQSPDAGYPPSFNCEGSHDMKKLGAFESYRGFLFGSVNPDVVPLK
                     EHLGEAAKIIDMIVDQAPDGIEVLRGMSTYTFDGNWKLQAENGADGYHVSAVHWNYAA
                     TTSRRSADGKVDTVKAMNAGKWALQGGGSYSFKNGHMLLWTNWSNPEDRPLYSKRAEW
                     VEKFGEAKADWMLRKSRNLCLYPNVYLMDQFSSQIRVVRPISVDKSEATIYCIAPKGE
                     PPEARQRRLRQYEDFFNATGMATPDDLEEFRSCQKGYEARAVKWNDMCRGAVHWVEGP
                     DDNANLIGLKPELSGVKTEDEGLYTVQHKYWLETMKKSLQAEHANGGS"
     gene            2280..2765
                     /gene="benB"
                     /locus_tag="VLJ17_22565"
     CDS             2280..2765
                     /gene="benB"
                     /locus_tag="VLJ17_22565"
                     /EC_number="1.14.12.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018262286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006725 - cellular aromatic compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="benzoate 1,2-dioxygenase small subunit"
                     /protein_id="HSV25795.1"
                     /translation="MLSYEAVQSLLYQEARALDEKRWADWLAFYADDVEFFMPSWDDD
                     DKLTSDPNNEVSLIYYPSKQGLEDRVFRIETDRSSASTPDTRTGHSISNIEVLSQDET
                     TCELRFNWTTHSFRYKIIDTYFGTSEYTLDTSGPKPLIKRKYVVLKNDYIHHLLDIYH
                     I"
     gene            2802..3821
                     /gene="benC"
                     /locus_tag="VLJ17_22570"
     CDS             2802..3821
                     /gene="benC"
                     /locus_tag="VLJ17_22570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018236983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="benzoate 1,2-dioxygenase electron transfer
                     component BenC"
                     /protein_id="HSV25796.1"
                     /translation="MAYNIALQFEDGVTRIIPCDANELVADAAYRAKINIPLDCRDGA
                     CGTCKCHCESGKYTLGVYIEDALTEDEAANGYVLTCQMKVTTDCVIRVPASSAACKTE
                     VGTFAGKLASIARDSPTTVSFSLHAERPIAFLPGQYVNLQVPGSKETRSYSFSSAPNQ
                     SELSFLIRDVPDGMMSTYMRSKAQPDDFMMVSGPYGSFYLRPTIRPILMLAGGTGLAP
                     FLSMLLWLRDNPTDQPITLAYGVNTNDDLVELDTLNELKAVMPNFDFFTCTVDRASGH
                     PKLGYVTDHLSHDHLCGGDVDIYVCGPPPMVEGVRKWIAGVGVTPKNFHFEKFSSANE
                     AMATA"
     gene            3818..4603
                     /locus_tag="VLJ17_22575"
     CDS             3818..4603
                     /locus_tag="VLJ17_22575"
                     /EC_number="1.3.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003521922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate
                     dehydrogenase"
                     /protein_id="HSV25797.1"
                     /translation="MSRADRFENKVVIVTGAAQGIGRGVAMGVAAEGGTVLAVDRSNL
                     VTDVVAAIKSGGGAAAVFHADLETYAGAQSVMAEALSKFQRIDVLINNVGGTIWAKPF
                     EHYEEAQIEAEIRRSLFPTLWCCRAVLPIMIKQKHGVIVNVSTIATRSIHRVPYAAAK
                     GGVNAMTASLAMENARHGIRVNATAPGGTEAPPRQIPRNEAKPSSEEVAWYQGVIDQT
                     KESSLMHRYGTIDEQVAPILFFASDESSYITGSVLPVGGGDLG"
BASE COUNT          993 a         1360 c         1380 g          879 t
ORIGIN      
        1 ccatcaggtc agccatgtcc gggaagcgca ccttgtccac gatgtgattg ggcgcgaccg
       61 gcaagtggtc gcgcggcagc gttggcagtt ggcgagtcgt cttcatgccc tcagtctctt
      121 cttccggtgt ggccgcaaga tccgggtcga tgtacgacga ttggcaagcc tcgcatccgc
      181 ccgacgcgag catgcaccgt gccaatgtct ggacgatcgt tgggcgacaa ccctatgccc
      241 cttagcgcgg gcaatacagc gcgatttgca atcggcgggc ctcgaacaag tgatcgattg
      301 atgcatgtgc acgtgcagca aaacagcctg ctgtcgatca tttgattcaa tcatagccga
      361 tgccgcaagc gccgtccgat cacgcagggg cattgcttgc gtgtgacacc acgcaggatt
      421 ggaagaatta caagacagca aatcggcctt ggcatgcgtg atgctaagac catgccgaaa
      481 ccgcagcgat cgctgaaatg ctcgacggcg ttcaagagcc gagcatttcg attccggaag
      541 cgttcagggc accgctcaac tgtgctcgga ggaggcaaaa gccgtgacgc acatgcttct
      601 tgcgctcggc cccccaggcc gtacggttcc atattcgctc ggcttggcgc gcgaggtgca
      661 aacgcgcgac gaatcggctt ggcttcgctt gccggtgagt ctctccgcgg catcccacga
      721 tcagggcgga cgagcggact tccgtacgta cgttaccgca cagacatcat caggagcggc
      781 ggccagaatg aaacgccgtt cctcgaccgg atcgggcgtc ttcgatttcg caacaccgct
      841 tccgtgatat gcgatcgtgc cccgggctga cagcctattc atttcaatta cgaacaggag
      901 atcagcgtga ttcaaacgca gcaacacaac ggtatcaacg tcgccaagct ggaggcgatg
      961 ctgcatgaag acgccgacaa gcacatctac cagctggacc gcgccgcctt caccgacgag
     1021 cagctgttcg agctcgaatt gaaatacatc ttcgagggca actgggttta cctggcacac
     1081 gaaagccaga ttcccaacat aaacgatttc ctcacggtat ttatcggccg ccagccggtg
     1141 gtcatcacgc gcagccgcga cggcaagttg cacgcgttgg ccaacacatg cacccaccgc
     1201 ggcgcgattc tgtgccggca caagaagggc aaccgttcca gcttcacctg tccattccat
     1261 ggctggacct tcaacaatag cggcaagttg ttgaaggtca aagaccagtc gccggacgcc
     1321 ggctacccgc cgagcttcaa ctgcgaaggc agccacgaca tgaagaagct cggcgccttc
     1381 gagagctatc gtggcttcct gttcggtagc gtcaaccccg acgtggtgcc gctaaaggag
     1441 cacttgggtg aggcagccaa gatcatcgac atgatcgtcg accaggcccc cgacggtatc
     1501 gaggtgctgc gtggcatgtc gacctacacc ttcgacggaa actggaagct gcaggcggaa
     1561 aacggtgctg acggttacca cgtctcggcc gtgcattgga actatgccgc caccacgagc
     1621 cggcgcagcg ccgacggaaa agtcgatacc gtgaaggcga tgaatgccgg taaatgggcg
     1681 ctgcaaggcg gcggctcgta ttcgttcaag aacggacaca tgctgctgtg gaccaactgg
     1741 tcaaaccccg aggatcgacc gctgtattcg aagcgcgcgg agtgggtcga gaagttcggc
     1801 gaggccaagg cggattggat gctgcgcaag tcgcgcaatc tgtgcctcta ccccaacgtc
     1861 tatttgatgg atcagttcag ttcgcagatc cgtgttgtgc gaccgatctc ggtggacaag
     1921 agcgaagcca cgatctactg cattgcgccc aaaggtgagc cccccgaggc gcgccagcgc
     1981 cgtctgcgtc agtacgaaga ttttttcaac gccaccggta tggcgacgcc cgatgacctg
     2041 gaggagttcc gctcctgcca gaaaggctac gaggcgcgcg cggtcaagtg gaacgacatg
     2101 tgccgcggcg cggtgcattg ggtcgaaggt cccgacgaca acgccaacct catcggattg
     2161 aaacccgagc tgagcggcgt gaaaaccgag gacgagggcc tctacacggt gcagcacaag
     2221 tattggctcg aaacgatgaa gaaatcgctt caggccgaac acgccaatgg ggggagctga
     2281 tgctgtccta tgaggccgtg caatccttgc tttaccagga agctcgcgcg ctcgacgaga
     2341 agcgctgggc cgattggctt gcgttctacg ccgacgacgt ggagttcttc atgccgtcgt
     2401 gggatgacga cgacaagctc accagcgacc cgaacaacga ggtatcgctg atctactatc
     2461 cgagcaagca gggcttagaa gatcgcgtgt tccggatcga gactgaccgt tcaagcgcgt
     2521 cgacgccgga cacacgcacc ggacactcga tcagcaacat cgaggtgctg tcgcaagatg
     2581 agacaacctg cgagctgcgc ttcaattgga cgacgcacag ctttcgctac aagatcatcg
     2641 acacctactt cggcacttcc gagtacacgc tggatacttc cggtccgaag ccgctaatca
     2701 agcgcaagta tgtggtgttg aagaacgact acatccatca cttgctcgac atctatcaca
     2761 tctaagctcg cgaacttcat ctcatcgtcg aggatgcatt catggcatat aacattgccc
     2821 tgcagtttga ggacggcgtg acgcgaatca ttccgtgcga tgcgaacgaa ttggttgcgg
     2881 acgccgccta ccgcgccaag atcaacattc cactcgactg tcgcgatggt gcgtgcggaa
     2941 cgtgcaaatg ccattgcgag agcggcaagt acacgctcgg tgtctacatc gaggacgccc
     3001 tgactgagga cgaagccgct aatgggtacg tgctcacctg ccagatgaag gtgacaaccg
     3061 attgcgtgat ccgcgttccg gcctcgtcgg cggcgtgcaa gacagaggtc ggcacgtttg
     3121 ctggcaagct ggcgagcatc gcccgtgatt caccgacgac cgtgtcgttc tcgctgcacg
     3181 ccgagcggcc gattgccttc ctgcccgggc aatacgtgaa ccttcaggtc cccggcagca
     3241 aagagacccg ctcttactcg ttcagctcgg cgccgaacca gtccgagctc tcgttcctga
     3301 tccgcgatgt gccggatggc atgatgagta cctacatgcg cagcaaggcg cagccggacg
     3361 acttcatgat ggtcagcggg ccgtacggca gcttctacct gcgcccgacg attcgtccga
     3421 tcctgatgct cgccggtggc acgggcctcg caccgtttct gtcgatgctg ctttggctga
     3481 gggacaaccc gacggaccaa ccgatcacgt tggcctacgg tgtcaacaca aatgatgact
     3541 tggtcgagct cgacacgctg aacgagctca aagcggtgat gccaaacttc gacttcttta
     3601 cgtgcacggt cgatcgcgca agtggtcatc caaagcttgg ttatgtcacc gaccatctgt
     3661 cgcacgacca cctttgcggg ggtgacgtcg atatctacgt ttgcggaccg ccgccgatgg
     3721 tcgaaggtgt gcgcaagtgg atcgcgggtg tcggtgtcac gccaaagaac ttccatttcg
     3781 agaaattctc gtcagccaat gaggcgatgg ctacagcatg agccgcgcgg atcgtttcga
     3841 gaacaaggtc gttatcgtca ccggcgccgc gcaaggcatc ggacgcggcg tagcgatggg
     3901 tgtggcggcc gagggcggta cggtcctggc ggtggatcgc tccaatctgg tgaccgacgt
     3961 ggtagccgcg atcaagtctg gaggcggagc cgcggccgtc tttcacgccg acctcgaaac
     4021 gtacgcgggc gcgcaatcgg tcatggcgga agctttgtcg aagtttcagc gcatcgacgt
     4081 gctcatcaat aacgtcggtg gaacgatctg ggccaagccg ttcgagcatt acgaagaggc
     4141 gcaaatagag gcggaaatca ggcgttcgct attccccacc ttgtggtgct gccgagccgt
     4201 gttgccaatc atgataaagc agaagcacgg tgtcatcgtg aatgtctcga cgatcgctac
     4261 acgcagcata catcgcgtgc cctacgcggc ggccaagggc ggtgtcaacg ccatgacggc
     4321 ctccttggcg atggagaatg cgcggcacgg catccgcgtc aatgccactg cgccgggcgg
     4381 taccgaagcg cccccccgtc agatcccgcg caacgaggcg aaacccagca gcgaggaggt
     4441 tgcctggtat cagggcgtga tcgatcagac caaggagtcg agtctgatgc accgatacgg
     4501 caccatcgac gaacaggtgg cgccaatcct gttcttcgcg tcggacgagt cgtcctatat
     4561 cacgggctcg gttttgcctg tgggtggcgg tgatcttggt tgaaatctcg ga
//
LOCUS       DATILV010000937         3498 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1767850, whole genome shotgun sequence.
ACCESSION   DATILV010000937 DATILV010000000
VERSION     DATILV010000937.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3498)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3498)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3498
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1767850"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..267)
                     /locus_tag="VLJ17_22580"
     CDS             complement(<1..267)
                     /locus_tag="VLJ17_22580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014492551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25798.1"
                     /translation="MALLGKGLLAIWNGITDSAEAEFVRWHIREHIPERVGLPGFLRG
                     RRYAAHGGHPKYFNFYETETPQTLESAAYRARLNAPTAWTQAVVK"
     gene            complement(280..747)
                     /locus_tag="VLJ17_22585"
     CDS             complement(280..747)
                     /locus_tag="VLJ17_22585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020188263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
                     /protein_id="HSV25799.1"
                     /translation="MAKSGLDSVKIGDSYRFAKTVGETDIVLFAGITGDFSDTHVNDQ
                     YMKERSNLGGRIAHGALLVGYMSTASTISIAHIVHQEGLTDFPVSAGYDRIRFLKPVL
                     LGDTVTVTYTVTGVDKERGRSVAKVEVVNQTGELKAVAVHIMRWAKKLSSNRA"
     gene            911..2512
                     /locus_tag="VLJ17_22590"
     CDS             911..2512
                     /locus_tag="VLJ17_22590"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014492550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HSV25800.1"
                     /translation="MVFISASEAAQLVMSGSNVLVSGSGGGHGVPEAVLEALEARFLG
                     EGSPRDLTLTHVVGIGDRQQRGAARFGHDGMLKRSITSALIDSPILMDLALADKIESY
                     ILPQGVMSQLMREIAGGRPGLITKTGLHTFIDPRQGGGRQNASSKGELVEVIMIDGEE
                     WLRFKPLKFDVAILRGTTADEDGNVSMEQEAISGEMLSMAQATRRTGGIVIVQVKRLA
                     KRGVLSPRAVKIPGIVVDYVVVDPNQRQTYATDYSPSYAGELRVPLAAVKPLAFGHRK
                     IVARRAAMEFAPGAICNLGAGISTGIAAVAAEEDIVDRIVLTNEQGFVGGAPLTGPDS
                     GTAQNYDAVVDQPYQFDFYDGGGLDLAFLSFVEVDCQGSVNISRFGNKIVGVGGFINI
                     SQNAKHVIFSGTFTAGGLEMACADGALKILKEGQHKKFVERIECVSYSAPFALKEGRT
                     AVFITERAVLKAINGALEVIEVAPGIDLEGDVLRHMAFRPRVAANLKLMDKRLFSPAP
                     MNLRADMDAKARSVEQRKQGVWGVS"
     gene            2837..>3498
                     /locus_tag="VLJ17_22595"
     CDS             2837..>3498
                     /locus_tag="VLJ17_22595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008873154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISAzo13 family transposase"
                     /protein_id="HSV25801.1"
                     /translation="MAPLLDERSRRRWAASEARMIGRGGVSAVAEATGLARRTIYRGL
                     EDLEDRASVGNDRVRRRGGGRKSRITEDPTLLSDLKSLLEPVTRGDPMRRQLWTSLSL
                     RKLRAKLKSQGHDISHPVVGDCLRKLHYSLQANRKVHEGSEHMDRNAQFEYIDKKAGS
                     FLKDGQPVISVDTKKKELVGNFKNSGREWRPQGKLEEVNVHDFIDPKLKRAVPYGYMT
                     STT"
BASE COUNT          761 a          973 c         1072 g          692 t
ORIGIN      
        1 cttgaccacg gcctgggtcc aggccgttgg ggcattgagc cgggcgcgat atgcggcgga
       61 ctccaacgtt tgcggcgtct cggtttcata aaagttgaaa tatttcgggt ggcctccatg
      121 cgcagcgtag cggcggcccc tcaagaaccc aggtaacccg acacgctcgg gaatgtgctc
      181 gcgaatgtgc caccggacga actcggcttc ggctgaatcg gtgatgccat tccagatcgc
      241 gaggaggcct ttgccaagga gtgccatgag tgcgctcaat caggctcgat tagacgacag
      301 ctttttcgcc cacctcataa tgtgcactgc caccgctttg agctcgccgg tttgattgac
      361 cacttcgacc ttggcgacgc tgcggccccg ctccttgtcc acgccggtga cggtgtatgt
      421 caccgtcacc gtatcaccga gtaggaccgg cttgagaaaa cgaatcctgt catagccggc
      481 agagacgggg aaatccgtca aaccttcctg gtggacgatg tgtgcgatgc tgatcgtcga
      541 cgcagtggac atgtaaccga cgagaagggc accatgcgcg atacgccccc cgaggttcga
      601 acgctctttc atgtattggt cattgacgtg cgtatcgctg aaatcacccg tgatccccgc
      661 gaacagtacg atgtcggttt cgcccacggt cttcgcaaag cgatagctat cgccgatctt
      721 gacgctatcc agtccggatt tggccattgc actcctcaac gggtttttga aaccggatga
      781 cagtcgtcag acgtacaacc gaaatgttga cagcgggcgt gcccgcgcgc atatgtaacc
      841 ggttacaatt cagctctcga tttgtcaatg gaatcccctc gcgtttggcc tccgctccaa
      901 aggatcatca atggtgttta tcagtgcctc cgaggccgct cagctcgtta tgtccggttc
      961 gaatgtgttg gtgagtggat ccggcggcgg gcatggagtt cctgaagcgg tcttggaggc
     1021 tctggaagcc cgatttctgg gcgagggttc gccgcgtgac ctcacgctca ctcatgtggt
     1081 gggcatcggc gatcgccagc aaagaggcgc cgcgcggttc ggccatgacg ggatgctcaa
     1141 gcgcagcatc acgagcgcgc tcatcgattc tcccattctc atggacctag cactggccga
     1201 caaaatcgag tcctacatcc tgccgcaggg cgtcatgtct cagctcatgc gagagatcgc
     1261 cggggggcga cctggattga tcacgaagac gggattgcac accttcatcg atccacgaca
     1321 aggaggcggt cgacaaaacg catcctcgaa gggcgagttg gtcgaagtga taatgatcga
     1381 tggcgaagag tggctacgct tcaaacccct aaaattcgac gttgcgatcc tgcggggtac
     1441 gacggccgat gaagacggca acgtcagcat ggagcaagaa gccatctccg gcgaaatgct
     1501 gtcgatggcg caggccaccc gacgcactgg cggaatcgtt atcgtgcagg tcaagcggct
     1561 cgcaaagcgc ggtgtcttgt cgccgcgggc cgtcaagatt cccggaatcg tagtcgacta
     1621 tgttgtcgtc gaccccaatc aacgtcagac ctatgcaacg gactacagcc ccagctacgc
     1681 gggcgaactc agagtccctc tggccgcagt caagccgctt gcgtttggtc atcgcaagat
     1741 cgtggcccgc cgagcagcta tggaattcgc cccgggtgcg atctgcaatc tcggcgccgg
     1801 catatcgacg ggaatcgccg cggtcgcggc agaagaggat atcgtcgacc ggatcgtgct
     1861 cacgaatgag cagggcttcg tgggtggcgc tccactgacc ggcccagatt cgggaacggc
     1921 gcaaaattac gacgccgtag tggatcagcc ttaccagttc gacttctacg atggcggagg
     1981 cctcgatctg gcgttcctgt ccttcgtcga ggtcgactgc cagggcagcg ttaacatcag
     2041 ccgcttcgga aacaaaatcg tcggggtcgg cggcttcatc aatattagtc agaacgccaa
     2101 gcacgtcatt ttcagcggca cgttcacggc gggcggcctt gagatggcct gcgcggatgg
     2161 ggcgttgaag atcctcaaag aggggcagca taaaaagttc gtcgaacgga tcgaatgcgt
     2221 cagttatagt gcgccgttcg cgctgaagga gggacgcacc gcggtcttca ttaccgagcg
     2281 cgcggtccta aaagcgatca acggagcgct cgaggtgatc gaggttgcgc ccggcataga
     2341 cctggagggg gacgtactga ggcacatggc attccgcccc cgcgtcgcgg ccaatctcaa
     2401 gctcatggat aaacgccttt tttctccggc gccgatgaat ttgcgggccg acatggatgc
     2461 gaaggcccga agcgtcgagc agcgcaagca gggcgtttgg ggagtgagct aacgcggcgc
     2521 atcagtggaa ccagtgtgcc agcaacatcg caaacacgtc gccaaggacg attgacatcc
     2581 acccaatatt tcggcccatc gaggaaccgg cgtcgcgcga ctgtgacgcg ggcgtttgtc
     2641 tggctcaagt tgttgtcgat tgatgccggc aaggcggaat tcatccgaac gctgcccaga
     2701 ctgcaagtgc aacgacgccg acagtcatct gcaaatattg ctcgacgctc gtcgtcgctc
     2761 agctcggcgg ctgaggtaga atcgtcgcgt gataagcgct tcggacatca gagctcttcg
     2821 gaaacgttgg aaggcgatgg ctcctctgct ggatgagcgg agccgacgac gctgggcggc
     2881 gtcggaagca cgtatgattg gacgcggcgg tgtgagcgcc gtggctgagg cgacgggtct
     2941 ggcacgacgg acaatatatc gaggtcttga agatctcgaa gatcgtgcct cagttgggaa
     3001 tgaccgggta cgccggcggg gtggcggacg taaatcgagg ataaccgagg acccaaccct
     3061 gctttccgat ctcaagtcgc tgcttgaacc ggtgacgcga ggtgacccga tgcggcggca
     3121 attgtggacg tcgctcagcc tgcggaagct acgcgcgaag ctgaagagcc aggggcacga
     3181 tatcagccat ccggtggttg gggattgcct gcgcaagctg cattatagct tacaggccaa
     3241 ccggaaagtc cacgaaggaa gcgagcatat ggaccggaat gctcagtttg aatacatcga
     3301 caaaaaggct ggcagttttt tgaaggacgg ccagccggtc atctcggtcg atacgaaaaa
     3361 gaaggaattg gtcggcaatt tcaaaaattc aggccgcgaa tggagacccc aaggcaaact
     3421 cgaagaagtc aatgtgcatg actttattga tcccaagcta aaacgcgcgg tgccatacgg
     3481 gtatatgaca tcaacaac
//
LOCUS       DATILV010000938         5383 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3044682, whole genome shotgun sequence.
ACCESSION   DATILV010000938 DATILV010000000
VERSION     DATILV010000938.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5383
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3044682"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..351
                     /locus_tag="VLJ17_22600"
     CDS             <1..351
                     /locus_tag="VLJ17_22600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25802.1"
                     /translation="AATTGTGTAATEATAAATTGTGTAAATEATAATAGTGTAAASEA
                     TAATGTAASTSGSAAINFDGSDSPAIVQKLDHILAAFQLCVKNLSLHVREGRHVALEG
                     RRGAVAKAVFEGDR"
     gene            620..1108
                     /locus_tag="VLJ17_22605"
     CDS             620..1108
                     /locus_tag="VLJ17_22605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25803.1"
                     /translation="MHQFAKRAAVVALALIAVTVQPFSSVAFAAQGQGGGGGGPSGGG
                     SGSGGGGGPGPSGGGSSGGGGRGPPSSPSDLDNRQIRSGSDDRGGSSPSGGPGDVFTG
                     SGGSSGGPSSGAYVSFGGGSGGVAVSVSLDGVVRGAEARRSGTAADRTPPRLLVNFND
                     RF"
     gene            1409..2659
                     /locus_tag="VLJ17_22610"
     CDS             1409..2659
                     /locus_tag="VLJ17_22610"
                     /inference="COORDINATES: protein motif:HMM:NF021589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HSV25804.1"
                     /translation="MRSDRNISGLRQPVVAIVCAIGMLLLGGGGELAAQVRERQAQPP
                     TPTPGTPDASGTGSGVQFFAATQAGFDSNLDNRFVSRPSPFEMLQLGASGSYKPTDSS
                     AYSFYLSSRDFWYNTLDVSQRYDIDAAVGARYDISSNTALKLGASYYKDAISLDRYDY
                     YRGFADLINEGESYRLRVKLDSLTEVSTNQFFSGAVAPDVFASTNNKAFDFTKNGVTS
                     SLLLMQKQMVAPFVVGNYTDIDYFEQVANPLINRNAWEYWATAGARVTFNPDFSVDLG
                     ARYNHRNFADQLFTQFSSWYPDLRFTWHAFDGWTVRGIIERQIAEPTTTFGLADDLTT
                     YELDFDKRIDKWSFTGRAFLNHVRPIGDQLNYYKYNWFFGLGYDIAKDTKLFAEYYGR
                     YVVEKVSDLAYERTRVGAGVRVSF"
     gene            3066..3437
                     /locus_tag="VLJ17_22615"
     CDS             3066..3437
                     /locus_tag="VLJ17_22615"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV25805.1"
                     /translation="MVIRVAVVDDHPLFRDGVVATVNAAPEFQVVAEGECGSDAVRIA
                     RHQRPDIILLDVNMPENGLEAAREISVVSPSVKTVILTACEGAECMAAALAAGARSYI
                     TKGMSGAELVTTLRAVSLEAS"
     gene            complement(3765..4775)
                     /locus_tag="VLJ17_22620"
     CDS             complement(3765..4775)
                     /locus_tag="VLJ17_22620"
                     /inference="COORDINATES: protein motif:HMM:NF025598.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4340 domain-containing protein"
                     /protein_id="HSV25806.1"
                     /translation="MKPKHLTTLAAVAAISIITTGWVLRTSAPTGASDRRGESVIPSL
                     LAKGSDITGLSIRDGADTFVIERRDNRFVASDSGYPVKTDAVGDVVASSADLTFQEAR
                     TSDPARYGDLGLADPGAKDAGKEITFRTAGGELASLLVGNSDATVGGPSGGVFIRYKG
                     QPQTFLVRGSVRLPPTGRAGWFVPVSFDVKRYEIKKVELTGGGRDGITLLPSTETRGQ
                     FVVADVPEKRTPDDLKASLLPSLVDSFGFQDVRKATKPAADARRMVVETDEGLHIVFT
                     SLGELTEGWVHITAEATNESAKDKAKLITSKVEAYDFRLRSNEADRLGWTMADLSVEQ
                     KS"
     gene            complement(4795..>5383)
                     /locus_tag="VLJ17_22625"
     CDS             complement(4795..>5383)
                     /locus_tag="VLJ17_22625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25807.1"
                     /translation="LKKSAKPASVVLVGDADMLMDRNWIQMRSLFGQEVAQSFANNGD
                     FVINAVEQMSGGAALSDLRGRGVSWRPFELIQRMEAEADSRFRAKERELNIQLVETEQ
                     KLSKLPKAAEGSTEALTAEQAKTIEGFRSKLLAIRSELRDVQFALRREVDNLKNLITA
                     FNVGVVPVTIGVIALAFGMRRSRRPLPKKPLDPTA"
BASE COUNT         1060 a         1556 c         1622 g         1145 t
ORIGIN      
        1 gccgccacca ctgggaccgg gaccgccgcc accgaggcta ccgccgccgc caccactggg
       61 accgggaccg ccgccgccac cgaggctacc gccgccactg ctgggaccgg gaccgccgcc
      121 gccagcgagg ctaccgccgc caccgggacc gccgcctcca cctccgggag cgccgctatc
      181 aacttcgatg gttcggattc gcccgctatc gtccagaagc ttgatcacat acttgcggcc
      241 tttcagttgt gcgtcaagaa cctttccctt cacgtgaggg aggggcggca cgttgccctt
      301 gaggggcgcc gcggggctgt cgccaaagcg gtcttcgaag gcgaccgctg attgggtcgg
      361 caggagagca acaccggccg tcacaagcgc ccacgcgtag cgtacccatc gccggcacct
      421 acgtcgcaag ccgacatatg gtttcgcatc gcgattgaaa gcgcgggttg acaagcagcg
      481 gcccctctta tcgccatctt cgaatctgca gaacagaaaa tttgtataat caagcgcctg
      541 acggggggct gacaggacag tttgtccgtg gcattattgg tatgatattc cgatttcgct
      601 gacattggaa atataaaaaa tgcaccagtt cgccaaaagg gcagcggtgg tcgcgcttgc
      661 gttgatagca gtgacggttc aaccgttcag ctcggttgct tttgcggccc aggggcaggg
      721 cggtggcggt ggcggtccca gtggtggtgg cagcggcagt ggtggcggcg ggggacctgg
      781 tccgagcggt ggtggcagta gcggcggcgg ggggcgtggt cctccatcta gtccgtcgga
      841 tttggataat cgccagataa ggagcggctc cgacgataga gggggtagta gtccttctgg
      901 cggccctggc gacgtcttca ccggcagcgg tggctcgagt ggtggtccga gcagcggcgc
      961 atatgtgagt ttcggcggcg gcagtggggg cgttgcggtc tcagtgagcc ttgatggcgt
     1021 agtccgcggt gctgaggcca gacgcagcgg cactgcggcc gaccggacgc cgccgaggct
     1081 gctcgtcaac ttcaatgatc ggttttgagc gggcggcccc gccccaaggt gtctacagcg
     1141 tgcgggcgga cgcgtgacaa attccgaaac gcgcgggcaa tactcactat aacgtgatgg
     1201 ggattgcgag gctcaagccg taattattat cgggcgtgac taaaaaaaca cagcggacag
     1261 aagtcattta caacagggtc ttcccctagt aaacatatca ggggccatgg gtcataacgg
     1321 ccctggttct cttgactaac cttcggtcgt taggcagttt agaataacta aaataaaagc
     1381 ttccgtgcgg tgtttgtggg ggtgggcagt gcgttcggat cgcaatattt ccggtctgcg
     1441 ccagccggtg gttgcgatcg tctgtgcgat tggaatgttg ttgttgggtg ggggcggaga
     1501 gcttgccgcg caggtgcgcg aacgacaagc ccagccccct acccctacgc ctggcactcc
     1561 cgacgcaagt ggcacgggga gcggggttca gttcttcgcg gcaacccaag ccggcttcga
     1621 cagcaatctc gacaaccgct ttgtgtcgcg cccttcgcct ttcgaaatgc tgcaacttgg
     1681 ggcgagcgga tcctacaaac cgaccgatag ttctgcctat tcgttttatc tgagcagtcg
     1741 cgatttctgg tataatactc tcgacgtttc gcaacgttac gacatcgacg ctgcggttgg
     1801 cgcacggtat gatatctcgt cgaatacggc gctcaaactc ggagcgtcct actataagga
     1861 tgccatctcg ctggatcggt acgactatta caggggattt gccgatctga tcaatgaggg
     1921 ggaaagttat cggctccgcg tgaagctcga ctcgctcacc gaagtgagca ccaaccaatt
     1981 tttttccggt gcggttgctc ccgatgtgtt cgcttccacc aacaacaagg ctttcgactt
     2041 caccaagaac ggagtaacct ctagcctgtt gctgatgcag aagcagatgg ttgccccatt
     2101 tgttgtcggc aactatacgg acatcgatta ttttgaacag gtggccaatc cattgattaa
     2161 tcgcaatgcc tgggaatatt gggcaacggc gggcgcgcgg gtcaccttta atccggattt
     2221 ctctgttgat ctcggtgcgc gttacaatca tcgcaatttc gcggatcagt tattcacgca
     2281 gttctcgagc tggtatcctg acctacgttt cacatggcac gccttcgatg gttggacggt
     2341 gcgcggcatc atcgaacgcc aaatcgcgga gccgaccacg acattcgggc tggcggatga
     2401 cctcacaacc tacgaattgg atttcgacaa gcgaatcgac aaatggagtt ttaccggacg
     2461 cgcctttctt aaccatgtcc ggccaatcgg cgaccaactc aactactaca agtacaactg
     2521 gttcttcggt ctcggctacg acatcgccaa ggacaccaag cttttcgcag aatattacgg
     2581 cagatacgtt gtcgaaaaag tctcagactt ggcgtatgag cgaacgcgcg taggcgcggg
     2641 tgtgcgtgtg tcgttctagc gtggacttta ggcgattcgg tcattccggg atgccgcgcg
     2701 caagcgcgtc gcaatgacgc cgaaggacac gtgcgcagtc aacacgtaga acccgcagtg
     2761 ctagtattta gattttttgc acgtctgtgt gagcgcggtc acttcctacg acgttgcgac
     2821 catagtacgt gcctactagc ttaaactggc agaggtcagg ggggcgggct acaggcgagt
     2881 agcgcctggg ttaatggaac gttttcaata acatttctgt tttccggtgg aaaacagcat
     2941 ggcgcttgtg agcagcaaat gtgtcaattt gttgcttata acgcgcctaa aatatgacgt
     3001 ctctgacagg gggctgtcag cgctcatctg atattattgg gtaaatcgag cggaagggtc
     3061 agaaaatggt catccgagtg gccgtcgtcg acgaccaccc gttgttcagg gatggcgtgg
     3121 tggcaaccgt gaatgccgcg cctgaattcc aagtcgtggc ggaaggagag tgcggtagcg
     3181 acgcggtgcg cattgcacgg catcagcgcc ccgacattat attgctcgac gtgaacatgc
     3241 cggaaaacgg cctcgaagcc gcacgcgaga tttcggtcgt cagcccgtcc gtgaagaccg
     3301 tgatattgac cgcgtgtgag ggggctgagt gcatggccgc cgcactcgcg gcgggtgcgc
     3361 gctcttacat caccaagggc atgagcggcg ccgaactggt gacgaccttg cgggcagtgt
     3421 ctcttgaggc ctcgtgacgt tgaacccatt ttcaaggttg agtttgtcgg taggcttgtc
     3481 ccggccattc acatcttgtt tgcggaattt cgacaagaaa gatgtggatg cccgtgacaa
     3541 gcccgggcgt gacctctaga actcggatgc ccgccgacaa gcgcgggtat tgttccagaa
     3601 cgggtgatta gatctcatcg gacttgcgca aaaaagcggg gccgcgatcc cgacgaactc
     3661 gcccccggct agtcgaaatc gcagcccgcc agtgcggctt cgatcgtccc attccccatc
     3721 gaagccggaa tctcaagcaa tcgctgtgcg aggcttactc tgtctcaact cttttgctcg
     3781 acgctcagat cggccatcgt ccaacccaga cggtcggctt cgtttgaacg caggcggaaa
     3841 tcgtaggcct caaccttgga cgtgatcagt ttcgccttgt ccttggccga ttcgttcgtg
     3901 gcttccgccg tgatatgcac ccacccttcg gtgagttcgc cgagagaggt gaagacgata
     3961 tgcaagccct cgtcggtctc gaccaccatg cggcgcgcat cagccgcagg tttggtggcc
     4021 ttgcgcacgt cctggaagcc gaagctgtct acgaggcttg ggagcagact cgccttcaaa
     4081 tcgtctgggg tgcgcttttc cggcacgtcg gcgactacga actgccctcg cgtttcggtg
     4141 ctcggcagta gagtgatgcc gtcacgtcca cccccggtga gctcgacttt tttgatctcg
     4201 tagcgcttga cgtcgaaact aacggggaca aaccaacccg cgcggccggt aggcggcagc
     4261 cggacgctgc cgcgcacgag gaacgtctgc ggttgcccct tgtagcggat gaagacgccg
     4321 cccgaggggc cgcctaccgt cgcatcgcta tttcctacga gcaaactcgc aagttcgccg
     4381 ccagccgtgc ggaacgtgat ctccttaccg gcatctttgg cgcctggatc cgcaaggcct
     4441 agatcgccat agcgagcggg atcgctagtg cgcgcctcct gaaaggtcag gtcagcgctg
     4501 cttgcaacga cgtcgcccac tgcatcggtc ttgaccggat aaccggagtc cgacgcgaca
     4561 aagcggttgt cgcgtcgctc gatcacgaac gtatcagcgc catcgcgtat ggagagcccg
     4621 gttatatcgc tccccttggc gaggagagag ggtatgacgc tttcaccacg ccgatccgat
     4681 gccccggtcg gagcgctggt gcgcaagacc cagccggtcg taatgatgct gatggccgcc
     4741 accgcagcaa gcgttgtgag atgcttcggt ttcatgacgt tgctccgtct tggactacgc
     4801 cgtgggatct aacggctttt tcggcaaggg gcgccgcgag cggcgcattc cgaaggcgag
     4861 cgcgatcact ccgatcgtca ccggcacgac gcccacattg aacgccgtaa tcaggttttt
     4921 gagattgtcg acttcgcggc gcagcgcaaa ctgcacgtca cgcaattctg atcggatcgc
     4981 cagcaattta gagcggaagc cctcaatggt cttggcttgc tccgccgtca gcgcctcagt
     5041 ggagccttcg gcggctttgg gtagtttcga cagcttctgc tccgtctcca ccagctgtat
     5101 gttcagttca cgctccttgg cacgaaagcg gctgtcggct tcggcctcca tccgctgaat
     5161 cagctcgaac ggcctccacg acacgccgcg cccgcgcagg tccgacaggg cggcgccacc
     5221 cgacatctgc tcgaccgcat tgatgacgaa atccccattg ttggcaaacg attgcgccac
     5281 ctcctgccca aacagcgagc gcatctgaat ccaattgcga tccatcagca tgtcggcatc
     5341 gccgaccagg acgacgctcg ccggcttggc ggactttttg agc
//
LOCUS       DATILV010000939         5338 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1512269, whole genome shotgun sequence.
ACCESSION   DATILV010000939 DATILV010000000
VERSION     DATILV010000939.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5338
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1512269"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..390
                     /locus_tag="VLJ17_22630"
     CDS             <1..390
                     /locus_tag="VLJ17_22630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010914078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein"
                     /protein_id="HSV25808.1"
                     /translation="GATSTCTCTGTCTGVSGYSASAMNTIVFGRGSSACNDATSVYTT
                     GMCDVFPRIAAANVVVAYTHKQSGTDTGLGYAGRPGGPVPTITVSLQNLPFQFYFLGG
                     LLNFANINIPGLTTSITGEDLSSSAPL"
     gene            409..1566
                     /locus_tag="VLJ17_22635"
     CDS             409..1566
                     /locus_tag="VLJ17_22635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25809.1"
                     /translation="MATYFVSADSNAERAASVEARIRGVIPDLLTTRSVEDAASRRRR
                     KADPVCVVLAPADDGAYLDRLIDMAAKHRDGIFFILLSSEISASDYKRLVRTGNVDWV
                     DVNGAPQEILDIMGRRKSALRSDPQPSRRPVAVVFLPSAGGVGNSTLAIETAIQLTQR
                     KQDQNRPVCLVDLDFQTSHICDYLDLQPRLKIGEIVGNPERLDGQLFEIFVSRHASGI
                     HVLAAPRCKVDVPAVDMPALDVLFEMIAARYDRILIDVPVAWHGWSPHVLAAANGIVV
                     TGANTIPGLRQVSEALTVIREAAGASPEVAVALNRCERTMFGRVARRSHVDSVLGNEK
                     VFFVRDDATAVQCINTGVPMTFAAPSRKVVKDIAAIADFCGRLTSSRAAPA"
     gene            1870..3255
                     /locus_tag="VLJ17_22640"
     CDS             1870..3255
                     /locus_tag="VLJ17_22640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014763706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CpaF family protein"
                     /protein_id="HSV25810.1"
                     /translation="MSFFTMNFARPQEPRFEAASPAPSAPGADEPYRELLAQRPALLD
                     EKLRLHQQIIDEFNLSVLEKLPPEELQRQVRSYVANYVKTERISLNQRELELFSDEIV
                     DEMTGYGPIEPLLKDPTVSDILINTHQVCFVERFGKLQPTKVHFKDEAHLLRIINKVV
                     AGVGRRVDEASPMVDARLPDGSRVNVAVRPIAVDGPLVSIRKFAERVFTMERLAEVGT
                     LRQQMVDVLSAAVRGRVSVIITGGTGSGKTTLLNALSNYIPAEERLITIEDAAELQLQ
                     QPHVGRLETRPANIEGRGEIRQRDLVKNALRMRPDRIIIGECRGEEAFDMLQAMNTGH
                     EGSMTTIHANSPRDGLKRLEQMVGMAGMPMTLGAIRSQIASAINVVVQVQRLPDGRRR
                     VTSVSEITGMEGDIIQMHEIYRFVKESTDESGNIRGSFKATGVRPHFLANIKAYGIEV
                     PAAHFDPTRPL"
     gene            3266..4216
                     /locus_tag="VLJ17_22645"
     CDS             3266..4216
                     /locus_tag="VLJ17_22645"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HSV25811.1"
                     /translation="MSELWLVYGLSFAAVVLGVEGLYWLMFRVRGDNKTINRRLALSK
                     RLPSQAAVLDALRQERGFVDLRSPFLSQVNDYVVQTGLRVGRDGLLLWLLGLGGGLLL
                     MSSLMFGLGPLAVLVAIAGAPLIMLGGLAMARRKRIARFAEQLPDAIDVIVRGVRVGH
                     PYAVALDLVARELPDPIGTEFGIVADEVAFGLDVMTATNNLYRRVGQEDLMFLTTTIS
                     VQTQTGGNLAEILSRLSQLMRNRSKLRLKIRALTAEGRISGWFLSAMPFVLFGVISLL
                     SPHYFGDVRDHPLIEPALAYMALSLLIGNVVIYRMVNFKY"
     gene            4224..5144
                     /locus_tag="VLJ17_22650"
     CDS             4224..5144
                     /locus_tag="VLJ17_22650"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HSV25812.1"
                     /translation="MSEMIPTITAALAFASVALLVYVVAQYYTADARLRRRLPVPSPA
                     SAAALTGGEGNLQTFITRQFAEERFGVDGAMRGKLRRELLKAGYFSEHALNYYIFARI
                     LSVAALPIVVFVLSRLFLPGMPTPLVLLIVTVAAFIGVLGPDAYLARRKRLLEQQYRQ
                     LFPDLVDLLVVCVSAGLSIEAAIDRARGQVTLRSRELAMHLEVMGAETRAGRSVVEAL
                     DALADRLGLDEAASFVAMLRQSIELGGDIIQALRVFSDEMRDKRLLRAEEAANKLSVK
                     MVVPLGAFIFPVVLMLVMLPVAIKLMSALR"
BASE COUNT          988 a         1587 c         1681 g         1082 t
ORIGIN      
        1 ggagcgacct cgacctgtac ctgcaccggc acctgtacgg gggtgagtgg ctacagcgct
       61 tcggcgatga ataccattgt gttcggccgc ggcagctcgg cttgcaacga tgcgacctcc
      121 gtctacacca cgggcatgtg cgacgtattt ccacgcatcg cggccgccaa tgtggtcgtg
      181 gcctacacgc acaagcaatc cgggaccgat actgggctcg gctacgccgg gcgcccgggc
      241 ggtccggtgc cgaccatcac ggtatccctg cagaatctgc catttcaatt ctatttcctc
      301 ggcgggctct tgaattttgc caacatcaac atcccgggct tgaccacatc gatcaccggc
      361 gaggacctgt cctcgtccgc tcccttgtaa gcttcgggac cagcagccat ggcaacctac
      421 ttcgtcagcg cggattcgaa tgccgagcgg gccgcaagcg tcgaggcacg tatccggggc
      481 gtgatacctg atctcctcac cacgcgaagc gtcgaggacg ctgcgagccg ccgcaggcgc
      541 aaagccgatc cggtctgcgt ggtgctcgca cccgccgatg acggcgccta tctcgaccgg
      601 ctgatcgaca tggccgccaa gcaccgcgac ggcatcttct tcatcctgct cagcagtgag
      661 atctcggcga gcgattacaa acgactggtg cgaaccggca atgtcgactg ggtcgatgtt
      721 aacggcgccc cgcaagaaat cctcgacatc atggggcggc gcaagtcggc actgcgcagc
      781 gatccgcagc cgtcacgacg cccggttgct gtggtttttc tgccgagcgc gggaggtgtc
      841 gggaattcga cgctcgccat cgagacggcg atccagctca cccagcgaaa gcaggaccag
      901 aaccgcccgg tctgcctcgt cgacctcgac ttccagacga gccatatttg cgactatctc
      961 gacctccagc cccgcctaaa gatcggcgag atcgtcggca acccggaacg gctcgatggc
     1021 cagctgtttg agattttcgt cagccgacat gccagcggca tccacgtgct cgccgcgccg
     1081 cgctgcaaag ttgacgtccc ggcggtcgac atgccggcgc tggatgtgtt gttcgagatg
     1141 atcgccgccc ggtacgaccg tatcctaatc gacgtgccgg ttgcgtggca tggatggtcg
     1201 ccgcacgtcc tcgctgcagc gaacgggatc gtggtgacag gggccaacac cattcctggg
     1261 ctgcgtcagg tatcggaggc gctcacggtc attcgcgaag cggccggtgc ctccccggaa
     1321 gtggccgtcg cgctcaatcg atgcgagcgc accatgttcg ggcgtgtggc cagacgcagc
     1381 catgtcgaca gcgtgctggg caatgagaag gtgttcttcg tgcgcgacga tgcgaccgcc
     1441 gtacagtgta tcaacaccgg tgttcccatg acattcgctg cgccgtcacg caaggtggta
     1501 aaggatattg ccgccatcgc cgacttttgc ggccggctga cctcatcgcg ggcggcgcca
     1561 gcctagcgta tgtccgccgc aaagggcccc attttggtcg gtccccaacg tggcgcggct
     1621 tgctcgggca gtcacccgca aggccaccct tttggtaaag aaatgaatcg tcgggtcacg
     1681 cccggacgat aaggtgctct agcatcctgc ttcgcgcgca atgccggtgg cgacgttaac
     1741 gaacaaaccc cggtggtgat gttaactgag caatcaaata tagccacgaa ctcgacatcg
     1801 gctctatgga aatcagtcgt gtgtcggcat aggcttgata cagacattgg ttgagatgcg
     1861 aggctgttgg tgagcttttt cacgatgaac tttgcgcgtc cgcaagagcc gcgatttgaa
     1921 gcggcatctc cggctccctc ggcgccgggc gcagacgagc cttaccgcga gctgcttgcg
     1981 cagcgtccgg cactgctgga tgaaaaactg cggctgcatc aacagatcat cgacgagttc
     2041 aacctcagcg tactggagaa gctgccgccg gaggagctgc agcggcaagt tcgtagctat
     2101 gtggcgaact acgtgaagac cgagcgaatt tccctcaatc agcgcgagct cgaactgttc
     2161 tcggacgaga ttgtggatga gatgaccggc tacggcccga tcgaaccttt gctcaaggac
     2221 ccgaccgtct ccgacattct gatcaacacc caccaagtgt gttttgtcga gcgatttgga
     2281 aagttgcagc cgaccaaggt gcatttcaag gatgaggcgc acctgctgcg catcatcaac
     2341 aaggtcgttg ccggtgttgg ccgtcgtgtt gacgaagcct cgccgatggt cgacgcgcgt
     2401 ctgcccgatg gttcgcgggt caatgtcgcg gtgcggccga tcgcggtgga cgggccgttg
     2461 gtctcgatcc gcaaatttgc cgaacgggtc ttcacgatgg agcggctcgc ggaggtcggc
     2521 acgctgcggc agcaaatggt tgacgtcctc agcgccgctg tacgcggccg ggtgtcggtt
     2581 atcatcaccg gcggcaccgg cagcggcaag accacgctgc tcaacgcact ttcgaactac
     2641 attccagctg aagaacggct cattaccatc gaggacgcgg cggaactgca actccagcag
     2701 ccgcatgtgg gcaggctcga gactcgcccg gccaatatcg agggccgggg cgaaatccgg
     2761 cagcgggatc tggtcaagaa tgcgctacgc atgcggccgg atcgcatcat tattggcgaa
     2821 tgccgcggcg aggaggcgtt cgacatgctg caggcgatga ataccggtca cgaaggctca
     2881 atgaccacca ttcacgccaa ttcgccgcgc gacggcctca agcggctcga acagatggtc
     2941 ggcatggccg gcatgccgat gacgcttggg gcgattcgca gccagatcgc ttcggccatc
     3001 aacgtcgtgg tgcaggtgca gcgtctgccc gatggcaggc ggcgcgtgac cagtgtgagc
     3061 gagattaccg ggatggaggg tgacatcatt caaatgcacg aaatctatcg tttcgtgaaa
     3121 gaatccactg acgagtccgg caatatccgg ggcagcttca aggcgaccgg ggtgaggccg
     3181 cattttctcg ccaatatcaa ggcttatgga atcgaggtgc cggcagcgca tttcgacccg
     3241 acccggccgc tgtgagattg cgctcgtgag tgagttgtgg ttggtctatg gactgagctt
     3301 tgcggccgtg gtcctcgggg tcgagggcct gtactggctg atgttccggg tgcgcggcga
     3361 taacaagacg atcaatcgca ggctggcact tagcaagcgg ctccccagtc aggccgcagt
     3421 gctcgacgcg ttgcgacaag agcggggatt tgtcgatctt cgcagtccgt tcctgtcaca
     3481 ggtgaacgat tatgtcgtgc agacaggctt gcgggtcggc cgggacgggc tgctgctctg
     3541 gctgctcgga ctgggcggcg ggcttttgct gatgtcgagc ctcatgttcg gcctggggcc
     3601 actggcggta ctggtcgcca tcgcgggcgc accgttgatc atgctgggtg ggttggcgat
     3661 ggcgcggaga aaaaggatcg cccgcttcgc cgagcagctg cccgatgcca tcgacgtcat
     3721 cgtcaggggc gtgcgggtcg ggcatccgta cgcggtcgcg ctggaccttg tcgcccgcga
     3781 gttgcccgat ccgatcggca cggaattcgg cattgtggcc gacgaggtgg cgttcggtct
     3841 ggacgtgatg accgcgacca acaatctata ccggcgcgtc ggtcaggagg atctcatgtt
     3901 cctgaccacg acaatcagcg tgcagaccca gaccggcggc aatttggcgg agattctgtc
     3961 gcgtctgtcg cagctgatgc gtaaccgctc caagcttcgt ctcaagattc gtgctctgac
     4021 tgccgagggg cgcatatcgg gatggttcct ttccgccatg ccattcgtgc tgttcggcgt
     4081 tatcagcctc ctttcgccgc actacttcgg cgatgtgcgc gatcatccgc tgatagagcc
     4141 cgcgctggca tatatggctt tgtcgctgct catcggcaac gtcgtgatct atcgcatggt
     4201 aaacttcaaa tattgatttg ctcatgtccg agatgattcc taccatcacc gccgcgcttg
     4261 ctttcgcgag cgttgcattg cttgtgtacg tcgtcgcgca gtactatacg gccgatgcgc
     4321 ggctgcggcg ccgtctgccg gtgccctccc cggcttcggc agccgcattg acgggtgggg
     4381 aggggaacct acagacgttc atcacccgcc agttcgcaga ggaacggttc ggcgtcgatg
     4441 gtgcgatgcg agggaaactg cgcagggagc tgctgaaggc ggggtatttc agcgaacacg
     4501 cgctgaacta ctacattttc gccagaatat tgagcgtggc agcgttgccg attgtggttt
     4561 tcgtcctgtc gaggctgttc ctgcctggca tgccgacacc gctcgtcttg ctgatcgtca
     4621 ccgtggccgc attcatcggc gttctcgggc ccgacgccta tctggcccgg cggaagcggt
     4681 tgctcgagca acaatatcgt caactcttcc ctgatctcgt cgacttgctg gtcgtgtgcg
     4741 tcagcgccgg gctcagcatc gaggccgcaa tcgaccgtgc ccgaggccag gtcacgctac
     4801 gaagccgcga gcttgccatg cacctcgagg tgatgggtgc agaaacccgg gccggccgta
     4861 gcgttgtcga agcgctcgat gccctggctg atcgcctggg actcgacgaa gccgcgtcgt
     4921 tcgtggcgat gcttcggcag tcgatcgaac tcggcgggga catcatccag gcgctgcgtg
     4981 tgttcagcga tgagatgcgg gacaaacgac tgctgcgcgc ggaggaagcg gcgaacaaac
     5041 tcagcgtgaa gatggtggtg ccgcttggtg cgttcatctt cccggtggtg ctgatgctcg
     5101 tgatgttgcc ggtcgccatc aaactcatga gcgccttgag atagcgtcgc cgaattggga
     5161 tgccggcacc ttaatggcgc cgcgtgtttc tctcgccccc ctgcacaata cctaagggca
     5221 ggccccaagg gtcgaacacg aatacgacgt tatatcgcca tatttttcca taagtgtgtt
     5281 ataatagtga cagtacagag gcgtattgtg tgctaaaaat ggcatgagat ggcgcaac
//
LOCUS       DATILV010000940         4919 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3551958, whole genome shotgun sequence.
ACCESSION   DATILV010000940 DATILV010000000
VERSION     DATILV010000940.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4919)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4919)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4919
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3551958"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            65..1804
                     /locus_tag="VLJ17_22655"
     CDS             65..1804
                     /locus_tag="VLJ17_22655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008130802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV25813.1"
                     /translation="MSFARLDPLAMSAEPETTAARHRRIAAERVRDARDRLTSTSGTR
                     PAFDYELLRQYARNRLSGALGIILLAGVIGVISTFWASLAWASLWLTIVLAIQLASII
                     KCRAFLAKPQHEVAVKRARLTFIVLDLLFGLAWMINIIHPAEDSRSTEIVNVFVVLLV
                     VAVSSMLGSSLPIAVLATAAPLTIAIAANYMLLGTVNGYMLAGLAITTLCYFGLLANR
                     FYASNLAMLEARAEKDALIGELEQAKAKSDEARRRAEAANIAKSRFLAQMSHELRTPL
                     NAILGFSEVMTNELFGAHAVPAYKDYANDIHNSGVHLLGLINEILDLSRIEAGRYELN
                     EEVVALVQVAVECHHLLKLRATNRDIAIHDQFEPDMPRLWADERAVRQICLNLLSNAI
                     KFTPQGGAIWLTVGWTAAGGQYLSVKDTGSGIPEHEIPIVLDTFGQGSNAIKSAEQGA
                     GLGLPIVKNLIELHGGTFSLKSKLREGTEVIVTFPPERVMSALEPMADIRLPSIFDPP
                     PIVPQTPDPDRHGAIAGFLASINFGRALRSRTKAASHVVTPMAILLAASLPLHGMSID
                     RAEVLPPHCETGI"
     gene            2059..2763
                     /locus_tag="VLJ17_22660"
     CDS             2059..2763
                     /locus_tag="VLJ17_22660"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR02281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02281 family clan AA aspartic protease"
                     /protein_id="HSV25814.1"
                     /translation="MRGSLKTLGLFAVFGALVIVVVRHGGAMAGLDDHEQLSLLYRVG
                     LLILVGSALARMFRDRFGEAARMALMWVVVALVLALGYTYRFEMKDTGNRILAELMPG
                     RSASHGRTVELARSGTGDFQIATQVNGARVPMVLDTGASSVMLTRDAAIAAGLPVEMI
                     KYNVNIETANGRTYAAAATIDRIAVGGIVERAVPALIAQPGTLKTSLLGMSFLSRLQG
                     WEVRGDKVVMRGSEVR"
     gene            complement(2864..3694)
                     /locus_tag="VLJ17_22665"
     CDS             complement(2864..3694)
                     /locus_tag="VLJ17_22665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HSV25815.1"
                     /translation="MGDVPIGELAVLATAVAGGGILTGLMAGLFGIGGGAVIVPVLFE
                     VFGVLGVAEDVRMQLCIGTSLAIIVPTTFRSYFTHRSKNIGLDDVVRKWTVPAIAGVA
                     TGAAVAAVAPAAVFKVAFAVTAAVIAVKLLFGRDSWRVADDLPRGPILLLFGYLIGLS
                     SSLMGVSGGSVANIIMMLYGKTIHTAVATSAGLGVPIAVAGTIGFMLAGLPHQSLMPP
                     LSIGYVSLVGFAVMAPISSYVAGFGARLAHKTPRRRLEIVFGLFLAIIAVRFMVASIG
                     "
     gene            complement(3720..4724)
                     /gene="dusA"
                     /locus_tag="VLJ17_22670"
     CDS             complement(3720..4724)
                     /gene="dusA"
                     /locus_tag="VLJ17_22670"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007608743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0002943 - tRNA dihydrouridine synthesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HSV25816.1"
                     /translation="MKPYQGHRFAIAPMMEWTDRHCRYFHRLMTRRALLYTEMLTTGA
                     VLHGDRSRLLRFDPSEHPVAVQLGGCDPDALAASARVCAEFGYDEINLNVGCPSDRVR
                     NGRFGACLMAAPALVGECVAAMKAAVAVPVTVKCRLGIDDQDPEAALDALADAAVAAG
                     VDRLIVHARKAWLSGLSPLENRRVPPLDYARVYRLKQRVPALDVVINGGVASVKEAGM
                     HLARLDGVMMGRAAYQEPWRLLDVDPVLFGAPAPMASAQMAAEALIPYVERETAAGVR
                     VHSILRHLVGLFHRVPGARAFRRHLSTAAVKPGAGAEVLRHALGLIAGGSALAETAVA
                     "
BASE COUNT          959 a         1555 c         1491 g          914 t
ORIGIN      
        1 tttaagcttg cccttaaggt ttttgggcga cattgagaac cttcttaacc acgtcagccg
       61 aacgatgagt ttcgcgcgtc tcgatcccct cgctatgtct gccgagcctg aaacgacggc
      121 agcgcggcac cggcggatcg cggcggagcg tgtccgcgac gcgcgcgacc gcctaacctc
      181 aacctcgggc acacgaccgg ccttcgacta tgagctgtta cgccaatatg cccggaatcg
      241 cctgtcgggt gcactcggga tcatcctgct cgctggcgtc atcggcgtca tttcgacctt
      301 ctgggcgagc cttgcctggg cgagcctatg gcttaccata gtgctcgcaa ttcagctcgc
      361 aagcataatc aaatgtcgcg cgttccttgc caagcctcaa cacgaggtgg cggtcaaacg
      421 agcacgactt accttcatcg tgctcgatct gctgttcggt ctagcctgga tgatcaacat
      481 cattcatccg gccgaggatt cgcgatcgac tgaaatcgtc aatgtattcg tcgtgctgct
      541 cgtcgtcgcg gtctccagca tgctgggctc gagtctgccg atcgcggtac ttgccaccgc
      601 cgcgcccctg acgatcgcta ttgcagcgaa ttatatgttg ctgggcaccg tgaatggcta
      661 catgctggct ggccttgcca ttacgacgct atgttatttc ggtctgctcg ccaaccggtt
      721 ctacgcttcg aacctcgcca tgctggaagc gcgcgccgaa aaggacgcgt tgatcggtga
      781 gcttgagcag gccaaggcga aatccgacga agcgcgccgc cgcgcggaag ccgccaacat
      841 cgcgaagtct cggttcctgg cgcagatgag ccacgagcta cgcaccccac tcaacgccat
      901 tctcggcttt tctgaggtga tgacgaacga gctatttggc gcccacgccg tgccagcgta
      961 caaagactac gccaatgaca tccacaattc cggagtgcat ctcctcggcc tcatcaatga
     1021 gatccttgat ctgtcacgca tcgaggcggg ccgctacgag ctcaacgagg aggtggttgc
     1081 cctcgtgcag gtcgcagtgg aatgccacca tctcctcaag ctgcgcgcca ccaaccgtga
     1141 catcgcgatt cacgatcagt tcgaacccga catgccgcgg ctatgggcgg acgagcgtgc
     1201 ggtgcgccag atctgcctca acctgctttc caatgccatc aagttcaccc cgcaaggcgg
     1261 cgcgatctgg ctcacggtcg gctggaccgc agcaggcggc cagtatctca gcgtcaaaga
     1321 caccggatcg ggtattccgg agcacgagat tccgatcgtg cttgatacgt ttggtcaggg
     1381 ctccaatgcg attaagtccg ccgaacaggg cgccggcctc ggcctgccga tcgtaaaaaa
     1441 cttaatcgaa ctgcacggcg gaaccttttc gctgaagtca aagctgcgcg agggcaccga
     1501 ggtcatcgtt acgttcccgc cggagcgggt gatgtcggcg cttgagccca tggcggacat
     1561 ccggctgccc agtatcttcg atccaccccc gatcgtaccc cagacaccag accccgaccg
     1621 gcacggcgcc atcgctgggt tcctggcgtc gatcaatttc ggccgcgcgc tccgcagtcg
     1681 caccaaggct gcgagccatg tcgtcacccc gatggcaatc ctgctcgccg cgagtcttcc
     1741 gctgcacggg atgtctatcg atcgcgccga agtgctccca ccgcactgcg aaactggtat
     1801 ataggtctgc cgagtcgcgt gatggggtgc cgtgcggcgg cgaggcttcg atcgaatcag
     1861 gttccgttct gatggaattc agacaagcat ctatcgttcc cgcgaaaatg cgtgaaatca
     1921 ttcggatctc atcctaagga gctcgcttct gcgtgcgtct cgaaggaagg caaaaagctc
     1981 atcgccatcc ttctagacgc ccgcttcgcg ggctcctcag gatgggggct tggattgctt
     2041 cgccggcgga gagatttcgt gcgaggttcg ttaaagacct tggggttatt cgccgttttc
     2101 ggcgcattgg tgattgtcgt tgtccgccac ggcggggcca tggcggggct tgacgatcac
     2161 gaacagttat cgttgctgta ccgggtcggt ctcttgatcc tggttggaag cgccttggcg
     2221 cggatgttcc gggaccggtt cggcgaggcg gcccggatgg ccctgatgtg ggtggtcgtc
     2281 gccctcgtgc tggcgctcgg ctacacttac cgcttcgaga tgaaggacac cggcaaccgg
     2341 attctggcgg aactgatgcc ggggcgctcg gcgtcgcatg ggcgcaccgt cgagttggcc
     2401 cgctccggca ccggagattt ccagattgcc acgcaagtca acggcgcgcg ggtgccgatg
     2461 gtgctcgata ccggggccag ttccgtcatg ctgacccgcg acgccgccat cgcggctggc
     2521 ctgccggtcg agatgatcaa gtacaatgtc aacatcgaga ctgctaacgg ccgcacttac
     2581 gcagctgctg ccaccatcga ccgtatcgcg gtcggcggca ttgtcgagcg cgcggtgccg
     2641 gcgctgatcg cccagccggg cacgctcaag accagcctgc tcgggatgag cttcctgtcc
     2701 aggctgcagg gctgggaggt gcgcggcgac aaggtggtga tgcggggttc agaggtcaga
     2761 tgacagacaa cggaggacag acgacagaga acagaaatca aaggtcagga attcggtatg
     2821 ggacgcgctc ctttctcttc tgtcatccgt catctatcgt cggtcatccg atgctggcaa
     2881 ccataaaccg caccgcgata atggccagga acagcccgaa aacgatttcc aggcgccggc
     2941 gcggtgtctt atgagcgagc cttgcgccaa agccggcgac atagctcgag atcggcgcca
     3001 tcacggcgaa gccgacgagc gatacatagc cgatggatag cggcggcatc aggctttgat
     3061 gcggcagacc ggccagcatg aaccctatgg taccagcgac cgcaatcggg acgcccagcc
     3121 cagcggaggt cgcgaccgca gtgtggatcg tcttgccgta aagcatcatg atgatgtttg
     3181 ccactgagcc gccgctcacg cccatgaggg acgacgagag cccgatcagg tagccgaaca
     3241 gcagcaggat cgggccgcgc ggtagatcgt cggcgacccg ccaactgtcg cggccgaaca
     3301 gtagttttac cgcaatcacg gcggctgtga cggcgaatgc caccttgaac acggcggccg
     3361 gtgcgactgc cgcaacggcg gcgccggtcg ccacgccggc gatggctggc acggtccatt
     3421 ttcgcaccac gtcgtcaagg ccgatgtttt tggaccggtg agtgaaatag gatcggaacg
     3481 tggtcggcac gatgatggcg agcgaagtgc cgatgcacag ctgcatgcga acatcctctg
     3541 cgacgccgag cacgccaaat acctcgaaca gcaccggcac gatgacggca ccgccgccga
     3601 ttccgaacag gcccgccata aggccggtaa gaataccgcc acccgcgacg gcggtcgcca
     3661 ggacagcaag ttcgccgatc gggacgtcgc ccatcactgt gcttcttccg gcaggaccgt
     3721 tatgcaacgg cggtttccgc caaggcggaa ccgcccgcaa tcagcccgag ggcatgacgc
     3781 aagacctcgg cgccggcgcc aggcttgacc gccgcggtcg aaaggtggcg gcggaacgcc
     3841 cgcgcccccg gcacccgatg aaatagcccc accaaatgcc gtaagatgga atgcacccgc
     3901 acgccggctg cggtctcgcg ctccacatat ggaatgagag cttcagcggc catttgggcc
     3961 gaggccatcg gcgccggtgc gccaaacagc acggggtcga catccaggag ccgccaaggc
     4021 tcctggtagg cggcccggcc catcatcaca ccgtcaagcc ttgcgaggtg catgccggcc
     4081 tctttcactg acgccacgcc gccgttgatg accacgtcaa gcgccggaac acgttgtttg
     4141 agccgataga cgcgagcgta atcgagcggc ggcacgcgac gattctccag tggcgacaga
     4201 ccactgagcc aggccttgcg ggcatgcacg atgagccggt cgactcccgc cgctaccgca
     4261 gcatcggcaa gggcatcgag cgccgcctct ggatcttgat cgtcgatgcc gaggcggcac
     4321 ttgaccgtca ccggcaccgc gaccgcggcc ttcatggcgg cgacgcattc gccaaccaac
     4381 gctggcgccg ccatgaggca agcgccgaag cggccattgc gtacacgatc ggatggacag
     4441 ccgacattga gattgatctc gtcatagccg aattccgcgc aaacgcgcgc cgatgcggcg
     4501 agcgcatcag gatcacatcc gccaagctgg accgcgactg gatgctcgct cggatcgaag
     4561 cgcaggagcc gtgaccggtc gccatgcagc actgcgccgg tggtgagcat ttcggtgtaa
     4621 agcaacgcgc gccgcgtcat cagccgatgg aaatagcggc agtggcggtc ggtccattcc
     4681 atcataggcg caatggcaaa cctatgtcct tgatatggct tcattttttt agtgctctca
     4741 actcgttagg tcgcctcgtg tgcactcctt tctacgccat ggcgcaacga ttttcgcccc
     4801 tgttcgacgc ctcagttcac agagagccca cacgccgtgg cgacctttac caagctcaaa
     4861 tctgggtcgt ggcgggtcca agtccgacgg aaggggaagt atatcaacaa cacaccttt
//
LOCUS       DATILV010000941         2560 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2275843, whole genome shotgun sequence.
ACCESSION   DATILV010000941 DATILV010000000
VERSION     DATILV010000941.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2560
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2275843"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(63..1676)
                     /locus_tag="VLJ17_22675"
     CDS             complement(63..1676)
                     /locus_tag="VLJ17_22675"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HSV25817.1"
                     /translation="MADTTAKALQEFDYIIVGAGSAGCVLAGRLSEDRNLRVALLEAG
                     GLDDAPEISMPVVFPQLFKTKYDWDFATEPEQSLRERRIYLPRGRTLGGSSAMNAMIY
                     IRGNAVDFDGWADEGARGWSYREMLPYFIRSEGNERGDPRYHGRSGPLTVQDGRSMHP
                     LVDHLIEAAVGSGYRLNDDFNGALQLGVGRFQLTQRNGVRCSAASGYLHPVRERANLQ
                     VFTDTLVLRLLLEGRHATGVSIHRYGQTETLFAEREIILAAGAYGSPQILMLSGIGSA
                     DELGPFGIPVVVDLPVGTNLQDHPLLPMSYLTGERSLFGAGSPEDVALFKEGHGPLSS
                     NIAEAGVFLSTCGDKSVPDCQFEMAPAMYFNEGLSAPSDHAFSMTTTLLKPTSRGRVA
                     LRSARPDAKPRIYHNYLSTAQDRATMIASVRLAMDIFAQPNLSKVRRAPFSVPASDAE
                     ADIVAFIEQQMGTNYHPTCTCAIGRVVDSDLRVFGTEGLRVVDASVMPSIVRGNTNAA
                     VIAIAEKATDTLQGNGPVEAQHQIQARTV"
BASE COUNT          552 a          738 c          734 g          536 t
ORIGIN      
        1 ccgagcagat gaaagcacag tggcagaagc gtggcgcgtc gccggttggc gaagggagcc
       61 gcctataccg tgcgagcctg gatttgatgc tgcgcctcga cgggtccatt cccttgcaga
      121 gtgtccgtcg ccttttccgc gattgcgatc acagcggcgt tggtattgcc gcgcacgatc
      181 gagggcatca cggacgcatc gactacacgc agcccttcgg tgccgaaaac ccgtagatcg
      241 gagtcgacga cgcggccgat cgcgcaagtg cacgtcggat gatagttcgt gcccatctgc
      301 tgctcaataa atgcgacgat gtcggcctcc gcgtcggatg ccggaacgga gaagggcgcg
      361 cgccgcacct tcgacaaatt gggctgagcg aagatatcca tcgccagccg tacgctggcg
      421 atcattgtcg cgcgatcttg cgcggtactt agatagttgt ggtagatgcg cggttttgcg
      481 tcgggtcgcg ccgaccgcaa tgccactctg ccacggcttg tcggcttaag cagagttgtc
      541 gtcatagaaa aggcgtgatc ggagggcgcc gacagtcctt cattgaagta catcgcgggc
      601 gccatttcaa attggcagtc cggcacgctc ttatcgccac acgttgatag gaatacacca
      661 gcctcagcga tgtttgagct caaagggccg tggccttcct tgaagagcgc cacatcttca
      721 ggtgatcctg caccgaagag cgatctctcg ccggtgaggt agctcatcgg cagtagcgga
      781 tggtcctgaa ggttagttcc caccggaaga tcaacgacca caggaatacc aaacgggccc
      841 agttcgtcgg ccgatccgat acctgacagc atgaggattt gaggtgagcc ataggcgcct
      901 gccgcgagga tgatttccct ttcggcgaaa agagtttccg tctggccata acgatggatt
      961 gacacgccgg tagcgtggcg accctccaac agtaaccgga gcacgagggt atccgtgaaa
     1021 acttgcaggt tcgcccgttc gcgcacaggg tgtagataac ccgaggcggc gctgcaacga
     1081 actccgttac gctgcgtgag ctgaaagcgc ccgactccca gttgcaaggc cccgttgaaa
     1141 tcgtcattta ggcgatagcc cgatcccaca gccgcctcaa tcaggtgatc tactagcgga
     1201 tgcatggagc ggccatcttg cacagtcagg ggacccgaac gtccatggta acgtgggtca
     1261 ccccgctcgt tgccctcgga cctgatgaaa tagggcagca tctcacggta cgaccacccc
     1321 cgtgcgccct cgtccgccca gccatcgaaa tcaactgcgt ttccgcgaat atagatcatg
     1381 gcgttcatcg cggaactgcc gccgagtgtt ctgccgcgag gcaggtagat ccgacgctcc
     1441 ctgaggctct gctccggctc ggtcgcaaag tcccaatcgt acttggtctt gaacaattgg
     1501 ggaaagacga cgggcatact gatctcgggc gcgtcgtcca gacctcctgc ctccagcagg
     1561 gccacccgga gattccgatc ctcgctgagg cgtcccgcga ggacgcatcc agccgaaccg
     1621 gcccctacta ttatgtaatc aaattcttgt agcgcctttg ccgttgtatc ggccatataa
     1681 tctccgctgt tgagattttt attgttcggg caaaacggaa gaacctgacc cgcagacgat
     1741 gaggtcgtaa tgtggcttca gtgccgttag tgagtttctc ttggttgacg cggacctgct
     1801 cgatgaaatc gatcgtcgca gagtttggct caggatttgc gttactgcca agagatgttt
     1861 tggacggcga actcatcgaa tcaccctttc atatagctaa aacacatggg agcttcgttt
     1921 attccaagga atcaaacttg aggccgacgg cgggaggatg tccaatgagg aactgaaagc
     1981 cttccttccg aggaacaacg cgcggcgcgg atcatctcgg ttgtgagaag tcagtctcgg
     2041 aacaggccgg tcgcagcatg cgcaagtcgc actcgcctgg ctgcgtcagc aaacggtgct
     2101 agtaatccag atcattggag ctgcgggagg tatctcagct ccaggacaat ctcgccagtt
     2161 tggatttcaa gctttccagc ggaacaactg aaatcgctcg atgaagcaag ccgaatcgaa
     2221 ctcggattcc cccagagtgt ttaggagaaa gaaatggctc gtgcaattag atatggcggt
     2281 gtgtgggatc gcctcctcct ttaaggcgac ggtctgggca gcccctgcac ctttgctcct
     2341 ctgccgacgg atccatcggc tttctgaacc cgttccgcgt tactcgcaag gagacggata
     2401 ttagaagcac gaattcgtac cgatgaacgc ccgtacacag ccactcagca gaccacctct
     2461 ccgtgggcgc ttcagataca gcactacgac ttaccgcgag ttggcaatct accgctgggc
     2521 aaatcgggtt cgacgactac ttccgcgcat cggccgccgt
//
LOCUS       DATILV010000942         6381 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3306678, whole genome shotgun sequence.
ACCESSION   DATILV010000942 DATILV010000000
VERSION     DATILV010000942.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6381)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6381)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6381
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3306678"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            197..1348
                     /locus_tag="VLJ17_22680"
     CDS             197..1348
                     /locus_tag="VLJ17_22680"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HSV25818.1"
                     /translation="MASHTIGIIVHGATGRIGSTQHLKNALTPIRAEGGLAVGGDRIM
                     PQLILVGRDKERLAAIARENGGAAWTTDLDAALSDPTYAVLFDAAATHQRKATLEKGI
                     AAGKHIYAEKPVAMTVMEGRALLAQITARGLKHGAVEDKQYLPGMRKLSALAQAGFFG
                     RILGFRLEFGWWVFDGFDEPCQRPSWNYRKAGGGGLLLDMYSHFRYLIEGLLGPIHRV
                     VTSAAIAMAERVDEAGMRYAVDVEDQATTLIELASGTTGAIIASWATRVRRDDLMTFQ
                     IDGTKGSAIAGLHRCYMQPLADTPKTAAFNPTVDLAIDYRARWQEAPAAGPYLNPYRV
                     GWEDFLRHLVAGAPLSSDFAAGVRDVAFAEACWRSAHERNWVSFDDAAS"
     gene            complement(1660..2889)
                     /locus_tag="VLJ17_22685"
     CDS             complement(1660..2889)
                     /locus_tag="VLJ17_22685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25819.1"
                     /translation="MLFNLFVDPFGMYRLLETDGPHGAKPAAYRRVKLAKAYDLRRIE
                     PQAIVLGTSRSHVALRMTHSGWKVPLVRRYNAAFDGATTKEMHTYLLHAHAVHPLRQV
                     VLGLDFWQLGRGPAWTRKDFNPSILFEPEKPLHNAAVYATDLSLLVSIDTTRGSIALL
                     RNTDSGGPQWLAPDGQRLGDVFFRQVEPTYSSSPASYLRNIDRQEIGFMLDTGPAVAT
                     AQRKLPPATSQPVLTSFDYIAKIVAFCCDNDIDLRIFITPAHAHQLEIANQLGGWPAI
                     ERGKRDLVDVLYRDAVGHPGSSAFTLYDFEGYSSVTSEPVPPDGSRSEMRYYWDSSHF
                     KENVGDWILDRLFGTEREEDPVPDDFGVSLMPATIEAALEKIRADQSAYQRDQPDEVR
                     FITSLIQQIKLEKLAAR"
     gene            complement(2966..4432)
                     /locus_tag="VLJ17_22690"
     CDS             complement(2966..4432)
                     /locus_tag="VLJ17_22690"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family O-acyltransferase"
                     /protein_id="HSV25820.1"
                     /translation="MLFNSYIFILLFLPATLFIFHALRTSGRHRMATAALAFASLVFY
                     GWWSLQALLLLLILMAANYAVVWRLLRSAAGAARLRLALVVTGVAGNLLVLGYFKCSN
                     FFLENWSALFGTEVDFVAVVLPLGLSFFTFQKIALLVDAYEGRVRHFDLLGYILFVTF
                     FPQLIAGPIVHHSEVMPQFALSDSMRKKDFAQGLVLFVIGLSKKVLVADTIAQLVGPA
                     FDAAAVGKLPSIVQAWTAALAYTLQLYFDFSGYSDMAIGLALLFGIRLPANFNSPYKA
                     LNIIEFWRQWHMTLSRFLRDYLYVPLGGNRRGEVRRYLNLLVTMVLGGLWHGAAWTFV
                     LWGALHGIFLVINHLWIALRPQIGLIGPSNFFTRFVSRTITFVAVVTAWVFFRAADLN
                     SAVLMLRAMAGNGGHVEATMDAAYGLEMITALLAIVWFAPNSLELTAYAFAKKQAALN
                     RIRFEGPMSPHWAIVCGLLLAFCLMSLTQVSEFLYFQF"
     gene            complement(4499..5272)
                     /gene="bcsS"
                     /locus_tag="VLJ17_22695"
     CDS             complement(4499..5272)
                     /gene="bcsS"
                     /locus_tag="VLJ17_22695"
                     /inference="COORDINATES: protein motif:HMM:NF028346.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsS"
                     /protein_id="HSV25821.1"
                     /translation="MKRTYRAAWVSALVLWVPSAVPAQPLNRLEVESNANVASFSSYY
                     GDLSLTLSPFAPYYESGFKLRFAASYAGYSYPGDLARTFISKGNDIQTDFLLGYGFQF
                     DRWSLMLLAGPTVIWSHQMPGNNSLPSMDTTEVGAKAVASVYATPTDQTMFYAQGAFS
                     SVNSIYYTQVKFGGALWPSIYVGPEATVTGRMAVGGVHSIDAFSATSFDITIQQWKVG
                     AFISGLKIGPLLFGVSAGYLNDLQQGNGAYVSTSVRTTF"
     gene            complement(5301..>6381)
                     /locus_tag="VLJ17_22700"
     CDS             complement(5301..>6381)
                     /locus_tag="VLJ17_22700"
                     /inference="COORDINATES: protein motif:HMM:NF025017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSV25822.1"
                     /translation="HQGSSYYDAAYWVGANALLRVSALREIRTYAKERGHVVSVFIQE
                     RTVIEDTGSTIDLIRKGWKVHNYPDRLAYSATPPDFGALIIQRRRWSNGGLLILPDLI
                     RFWQASWRNRSRTIETLVRLHYLISPAAGSISVLTLLLYPFDFTFSVIWLPLAAAPYY
                     FLYGRDLIRSGYKWVDLLRVYALNLLLLPVNLAGVLLSIRQAVVGAKAPFGRTPKVKN
                     RIAVPPLYSGFNALLCMVMVLAAAYEIVSGNYTRALFPLFNGAFYAYGLVAFIGLGQS
                     WADTLLMIRQRSTSGHSVAILPSPPRTGNGDADRRRVARVVAQVAQGRQATDGPLRIN
                     GRTGVGKASDERHSDREAPLLIQSV"
BASE COUNT         1453 a         1818 c         1876 g         1234 t
ORIGIN      
        1 ggagttttcg aaaagccaat tggcgatcct ttcgaccaaa tcgtattttg actctgacag
       61 acggttttcc cgaaccgaca atcgaacgtc ggaaatgcgc agatggtcag cgcgcgtggc
      121 cttgcgtatc atgatctcga acaccaagcg actgacgttg cgtttatcct aatttagcat
      181 atcgttaaaa gtccaaatgg cctcccacac catcggcatc atcgtgcatg gcgcgaccgg
      241 ccgcatcggc tcgacgcagc atttgaaaaa tgcgctcacg ccaattcgtg ctgagggcgg
      301 ccttgcggtc ggaggggacc gcatcatgcc gcagctgatc ctcgtggggc gcgacaagga
      361 gcgccttgcc gcgatcgcgc gggagaacgg cggggcggct tggaccaccg atctcgatgc
      421 cgcgttgtcc gatccgacct atgcggtgct gtttgatgcc gctgccaccc atcaacgcaa
      481 ggcaacgctc gaaaagggga tcgcggccgg taagcatatc tatgcggaaa agccggtcgc
      541 catgacggtc atggaggggc gggccctgct ggcacagatc acggcgcgcg gcctcaagca
      601 cggggcggtc gaggacaaac agtacctacc cggaatgcgc aagctgagcg cgctggcaca
      661 ggcgggattt ttcgggcgca tcctcggttt tcgcctcgag ttcggttggt gggtgtttga
      721 cggcttcgac gagccgtgcc aacggccgag ctggaactac cgcaaagctg gcggcggcgg
      781 cctgctgctc gacatgtatt cacactttcg ctacctgatc gaaggcttgc tcgggccaat
      841 ccatcgcgtc gtcacgtcgg ccgcgatcgc gatggcggag cgggtcgatg aagcagggat
      901 gcgctatgcg gtcgacgtgg aagatcaggc gaccaccctg attgagcttg cgtcgggtac
      961 gaccggcgcc atcatcgcct catgggcgac ccgggtgcga cgcgatgatc tcatgacctt
     1021 ccaaatcgac ggcaccaagg gctccgccat tgcggggctg catcgctgtt acatgcaacc
     1081 gctcgccgac acccctaaga ccgcagcgtt caacccgacg gtcgacctcg caatcgatta
     1141 ccgcgcgcgc tggcaggaag cgcccgcggc ggggccttat ctcaatccct atcgggtcgg
     1201 ctgggaggat ttcctgcgcc atcttgtggc aggcgcgccg ctgtcttcgg atttcgccgc
     1261 cggcgtccgc gatgtcgcgt ttgcggaggc ttgctggcgc agcgcccacg agaggaactg
     1321 ggtcagcttt gatgatgcgg cgagctagcc ctcgattgaa taaaggctcg gcagtgcccg
     1381 atccggaaat tgaatcgcca acagccagct gttcttgctc aattccaacg cgcagtgaag
     1441 agtgccccca caggccatag agcacaatat ccggtccatt tgccagtctc cttcaattgc
     1501 aagtcaccct ggacgaagga gaatgacgga agatttaggc ggtgccttcg tccgcctcac
     1561 agcatcttca cagaagcgct cgtgttcgtc ggacttgatc cgtttgtttt ccgggcgcga
     1621 tctgcaagca gaggctttta gcaacgaaat gcaggccgcc tatcgagctg caagcttttc
     1681 tagcttgatt tgctggatca gcgacgtaat gaacctcacc tcgtcaggtt ggtcgcgctg
     1741 gtaggcactt tgatcggcgc gaattttttc caatgccgct tcaatggtgg cgggcattaa
     1801 actcacgccg aagtcgtccg gaaccgggtc ctcctcccgc tctgttccaa acaaccggtc
     1861 gagaatccag tctccgacgt tttccttgaa atgcgacgag tcccagtaat atcgcatttc
     1921 ggaacggcta ccgtccgggg gaacaggttc ggacgtcacc gaggagtagc cctcgaaatc
     1981 gtagagtgta aacgcactcg agccaggatg gcccacagcg tcgcggtaca gcacgtcgac
     2041 taaatcgcgc ttgccgcgct caatggccgg ccagccgccg agctggttgg cgatttccag
     2101 ctgatgggca tgagcgggag ttatgaaaat tcgcagatcg atgtcgttgt cgcagcagaa
     2161 agcgacgatt ttcgcaatgt agtcgaaaga tgtgagtacg ggctgggaag tggctggagg
     2221 gagttttctc tgcgcggttg cgacagctgg accggtatcg agcatgaacc cgatttcctg
     2281 ccggtcaatg ttgcgtaaat acgacgctgg agaactggaa taggtcggct ccacctgtcg
     2341 aaagaagaca tcgccgagac gctgtccgtc gggcgctagc cattgtgggc ctcccgaatc
     2401 tgtgttgcgt agcagggcga tgctgcccct ggtggtatcg atgctgacaa gcaaggagag
     2461 gtctgtggca taaacggcag cattgtggag gggtttttcg ggttcaaaaa gaatcgacgg
     2521 attgaagtcc ttccgggtcc aggcggggcc acgcccgagc tgccagaaat caagaccgag
     2581 caccacttgt cgaagcggat gcacggcatg ggcatggaga aggtaggtat gcatttcctt
     2641 cgtcgtcgcc ccatcgaacg cggcattgta acggcgcact aagggcacct tccagccgct
     2701 atgcgtcatg cgcaacgcga catggctgcg cgaggttccg agcacgattg cttgcggctc
     2761 tatgcgcctg aggtcatagg ctttggcaag cttcacgcgg cgataggctg ccggttttgc
     2821 cccatgcggt ccgtccgttt cgagcaggcg atacatgccg aagggatcga cgaacaggtt
     2881 gaacagcaac accgatccgc acgtgaggac gacggtcacc atgatgacga cagcatgcaa
     2941 ccgggagtct tttcgcatta ccgcctcaga actggaaata caggaactcg ctcacctgcg
     3001 tcagcgacat cagacagaat gccagcaaca ggccgcaaac gatggcccag tggggtgaca
     3061 ttggcccttc gaaccgaatc cggttcagcg ccgcctgctt cttggcgaaa gcgtaggccg
     3121 tgagctccag gctattcggt gcaaaccaga caatcgccag cagcgctgtg atcatttcca
     3181 agccgtaagc cgcatccatc gtggcttcga catggccgcc gtttcccgcc atggcacgca
     3241 gcatcaagac tgccgaattg aggtccgccg cgcggaagaa gacccacgcc gtcaccaccg
     3301 cgacgaacgt gatggtccgc gatacgaaac gcgtgaagaa gttcgacggg ccgatcaatc
     3361 caatttgcgg gcgcaaggcg atccagagat gatttatcac gaggaagatg ccatgcagcg
     3421 cgccccagag cacaaacgtc caggccgcgc cgtgccaaag gccgccaagc accatcgtta
     3481 caaggagatt gagataacga cgaacctccc cacgccggtt gccgccgagc ggaacgtaca
     3541 gatagtcgcg caggaagcgc gacagcgtca tatgccattg ccgccaaaac tcgatgatgt
     3601 tgagcgcttt gtacggcgaa ttgaaattcg ccggaagccg aatgccaaat agcagcgcga
     3661 gcccgatggc catgtcggaa tagccggaga aatcgaaata aagttgtagc gtgtaggcga
     3721 gggctgcagt ccatgcctgc acaatggagg gcaattttcc cacagctgct gcgtcgaagg
     3781 cgggtcccac gagttgcgcg atcgtatcgg cgacaagaac tttcttggat aggccaatga
     3841 cgaacagcac cagcccttgc gcgaaatcct tcttccgcat cgagtcgctg agcgcgaatt
     3901 gcggcattac ctcgctatga tggacgatcg gcccggcaat cagttgagga aagaaagtta
     3961 cgaaaaggat ataacccagc agatcgaaat gccgcacgcg cccctcatag gcatcgacca
     4021 gcaacgcgat tttttgaaag gtgaagaacg acagtccaag gggaagcacg acggctacga
     4081 aatcgacttc ggtcccgaat agggcggacc agttttccag aaagaagttg ctgcatttga
     4141 aatacccgag aaccaggaga ttgccggcga cccctgttac caccaaggca agccttagcc
     4201 gcgctgcccc cgccgcgctc cgcagcaggc gccataccac cgcgtaattc gctgccataa
     4261 gaatgagcag tagcagaagc gcttgcaagc tccaccatcc gtagaagacc agcgacgcaa
     4321 atgccaatgc cgcggtcgcc atgcgatggc ggccactggt gcgcagtgcg tggaaaatga
     4381 ataacgtggc gggaagaaaa agcaggatga aaatatagga gttgaacagc attgcgaata
     4441 caagctaatg cagagtgccc aagcacattt ttgttgacgc tgctgtggga gtcatcgttt
     4501 aaaaagtcgt gcgaacggac gtgctaacat acgcgccatt tccttgctga agatcgttca
     4561 ggtaccctgc cgacactccg aacagcagcg gcccgatctt caatccggag atgaatgcgc
     4621 caactttcca ctgctgaatg gttatgtcga acgaagtggc ggaaaacgcg tctatcgaat
     4681 ggaccccacc gaccgccata cgccccgtga cggtggcttc cggcccgaca tagattgacg
     4741 gccataaggc gccgccgaat ttcacctgcg tatagtagat gctgttcacg ctggagaagg
     4801 ccccctgggc gtagaacatg gtttggtctg tcggcgtcgc gtaaaccgat gcaaccgcct
     4861 tcgcaccaac ttccgttgtg tccattgacg gcaatgaatt gttgccgggc atttgatgcg
     4921 accaaatgac ggttggcccc gccaagagca tgagggacca ccggtcgaat tggaagccgt
     4981 agcccaggag gaagtcggtc tggatgtcgt ttccctttga aataaaagtc ctcgctagat
     5041 cgcccggata gctatacccc gcatacgaag ccgcgaaacg caatttgaat ccgctctcat
     5101 aatatggcgc gaacggagac agcgtcaggg ataaatcgcc atagtacgaa ctgaagcttg
     5161 cgacatttgc attactctcc acctcaagcc ggtttagtgg ttgtgcaggc accgccgagg
     5221 gcacccacaa caccagcgct gatacccagg cagcgcgata ggtccgtttc attccccgcg
     5281 tcccactttc attccgttgt ctacaccgac tgtatcaaca gcggggcttc ccgatcggaa
     5341 tgtctttcgt ctgaggcttt gccgacgccc gttcgtccat tgattcgcaa aggcccgtcg
     5401 gtcgcttgcc gcccctgagc cacttgagcc actacccggg cgacgcggcg gcggtcggca
     5461 tctccattgc cggttcgtgg cggcgacgga agtatcgcaa cgctgtggcc gcttgttgaa
     5521 cgttgccgaa tcatcaacag cgtgtcagcc cagctttggc ccagaccgat gaaagcgact
     5581 aagccgtagg cataaaaagc gccattgaac aaaggaaaca gggcccgcgt gtaatttccg
     5641 gaaacgattt cataggccgc tgcaaggacc atgaccatgc acaagagagc gttgaagccg
     5701 gagtaaagcg gcggcacggc gatacgattt ttgactttcg gggtgcgccc gaacggtgcc
     5761 ttggcgccca ccacggcctg gcggatcgac agcagaaccc ctgccaggtt gaccggaagc
     5821 agcagcaggt tcagcgcata aacccgcagc aggtcgaccc atttgtagcc cgaccggatg
     5881 agatcgcgac catagagaaa gtagtaaggt gcagcagcca aaggaagcca tatgacggaa
     5941 aacgtaaagt cgaaagggta aagcaggagc gtgagaacgc tgatgctgcc ggccgccgga
     6001 gatataaggt aatgcagacg taccagcgtt tcgatcgttc gacttcgatt ccgccagctt
     6061 gcttgccaga aacggatcag gtcgggcagg atcagcagtc cgccgttcga ccaccgtcgt
     6121 ctttggatga tcagggcgcc aaaatcgggt ggcgtggcgc tgtaagcgag gcgatccgga
     6181 taattgtgga ctttccatcc cttgcggatg agatcaatgg tcgagccggt atcctcgata
     6241 acagttcgct cctggatgaa aacagaaacg acatgtccgc gctcttttgc gtaagtccgg
     6301 atctcacgaa gagcagagac acgcagcagg gcgttcgctc cgacccaata cgcggcgtcg
     6361 taatacgatg atccctgatg g
//
LOCUS       DATILV010000943         8556 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_742498, whole genome shotgun sequence.
ACCESSION   DATILV010000943 DATILV010000000
VERSION     DATILV010000943.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8556
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_742498"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..460)
                     /locus_tag="VLJ17_22705"
     CDS             complement(<1..460)
                     /locus_tag="VLJ17_22705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008193896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HSV25823.1"
                     /translation="MNTIIDHLFGAASFIPHGYCLLWRPDLVALHAISDSIIALSYFT
                     IPVGIVYFIHHRPDFGYSGIFGCFAAFIVACGLTHLAGLVTLWAPYYGLQGLIKAGTA
                     TISLITAYLIWPIIPQALTIMSPATLNAINKELESKIAENSRVTTELRSMH"
     gene            531..965
                     /locus_tag="VLJ17_22710"
     CDS             531..965
                     /locus_tag="VLJ17_22710"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV25824.1"
                     /translation="MAKSESIFILLVEDDPDDVFVTRKAIHSALQDRLTAEISVAHDG
                     AQAINMLRRHALQNSIPDLILLDLNMPTMDGHAFLRAFREEHLPRRPRVVVFTTSFDV
                     ALHDKALGEGADEAWAKPPTLSELQSVLKKILTPLIPQSHPT"
     gene            1439..3190
                     /locus_tag="VLJ17_22715"
     CDS             1439..3190
                     /locus_tag="VLJ17_22715"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HSV25825.1"
                     /translation="MTAGVVALTLLGTGLLARLGTGLLAPQTAAEVQKAHLLMLTLEN
                     MSQGLCVFDTSQRIIISNERYRAIYSLPEELVKPGTTLHQILDYRIVNGGYRGSPEEY
                     LNSQDATEIQQLGNGRIVEVLRRKIEDGGWLTIHEDITERRQNEGRISFLAHHDPLTG
                     LANREAFIEKIADWCTRYRRWGEEFNVLLLDLDRFKQINDAFGHPAGDVLLTQVADRL
                     RSSVRETDVLARLGGDEFAIIQAAQSNPRDSAQTLANRIIELLDEPFSVDGNDVTVSA
                     SIGITLAPEHGVIGDDLLKMADLALHHTKSQGRNGCTFFRSALSEAAVARQLLESELR
                     RAIAQNEFELHYQPFVDAETWAICGAEALVRWRHPQNGLISPDRFIPAAEESGLISQI
                     GEWVLRSACAEAASWPTPTKVAINLSAVQFRNSNLLDVVTHALTESGLPPQRLELEIT
                     ETALVEYGSECLSMLGQLKSLGISIALDDFGTGYSSLSQLTVFPFDKIKIDKSFTQNM
                     TKRADCAAIISAVLALAQSLNITTTAEGVETKEELRLLTMAGVSIVQGYLIKRAGPAS
                     ELDFHTLSIRPVAENVA"
     gene            complement(3241..4125)
                     /locus_tag="VLJ17_22720"
     CDS             complement(3241..4125)
                     /locus_tag="VLJ17_22720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25826.1"
                     /translation="MPRSNNTLSAQRLALAGCVIPGLVATAAFTSAAQPNNAVPPLAS
                     ADFGWQSNVADWRDPPPGYGHGPIKPDPAHPFTSNVEAAQTGTQPTKRIGNAKDPVLK
                     PWAAAQMQASNDDALRSEMAIPFAAQARCYPGGVPGQLLYPFEPVYFIQTPKEVWMMW
                     QRDHMVRRIFLTDQHSEYVTPSWFGESIGHYEDGGTLVVDTIGLSTKNSYIDNFRTPH
                     TEKLHVVERFTIEADGKNLTAIVKVEDPDTFNAPLTMQQRWFKVDSPMKETICAENNK
                     DYFNQGLFPIPEAERPDF"
     gene            4498..5955
                     /locus_tag="VLJ17_22725"
     CDS             4498..5955
                     /locus_tag="VLJ17_22725"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018640942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HSV25827.1"
                     /translation="MMLRDLLIGEARFEKRFEALRVSGISADSRAVKPGFVFAAVPGT
                     RADGLTYLPQAIAAGAVAVMAERMPSAPLPDHVALVDVPNVRRALALAAAKFFPRQPS
                     TIAAVTGTSGKTSVAAFTRQIWTARGHVAASIGTIGVVTPAGEVYGALTTPDPVELHR
                     VVDGLAGEGITHLALEASSHGLDQHRLDGLHVGIASFTNISRDHLDYHGTLEAYLRAK
                     LILFQHLVAQDGAAVIAVDHAFATEVVDAARRRGLRVVEVGRTARDIRVIDCVIEGFS
                     QALTIEHNDMRHQVRLPLVGAFQVENALVAAGQAIAGGEEPAAVFATLSGLTGAKGRL
                     ELVGRKSGAPIFIDYAHKPDALAKALDALRPYVSRRLVVAFGAGGDRDAGKRPLMGAI
                     AAEKADRVIVTDDNPRSEDPSAIRAAILRGAPDADEIGDRHEAIRRAVADLQAGDVLL
                     VAGKGHETGQIIGQKTVPFSDHEAVRAALAVGEQP"
     gene            5952..7394
                     /locus_tag="VLJ17_22730"
     CDS             5952..7394
                     /locus_tag="VLJ17_22730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0047480 -
                     UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoylalanyl-D-glutamyl-2,
                     6-diaminopimelate--D-alanyl-D-alanine ligase"
                     /protein_id="HSV25828.1"
                     /translation="MTAPLWTLDAIAAATRAQCVGPLPQIVTGISIDSRTVTAGEAFF
                     AIKGDTHDGHDFVAAALERSAGLAVVAWNRAGGYGSDAPLIVVEDVLEALRDIARAAR
                     LRSAAKIVAVTGSVGKTSTKEALVLALASSGETHASAASFNNHWGVPLSLARMAQTAR
                     YGVFEIGMNHAGEITPLVHMVRPQVAIVTAVEPVHLEFFASVAAIADAKAEIFKGVER
                     GGAAVVNRDNRHFARLRRRAEEAGVQQFVSFGEHAGADARLLKCALHPDCSTVEATIL
                     GQAVTYKIGAPGRHLVTNSLAVLAAACIVGADLARAALALARQIPAAGRGTRVTLELP
                     EGRALVIDESYNANPASMRAALALLGQAPLGPGGRRIAVIGDMLELGPTSEDLHRGLV
                     EAIRHNGIDLVYCAGPLMAALWEALPSARRGGYAKTAAELEPLVLAVVRAGDALMVKA
                     SAGSHFGPIVKALVRRHSVTTAPEPAQARG"
     gene            7399..8484
                     /gene="mraY"
                     /locus_tag="VLJ17_22735"
     CDS             7399..8484
                     /gene="mraY"
                     /locus_tag="VLJ17_22735"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HSV25829.1"
                     /translation="MFYRLIEFSDTVSVLNVFRYITFRTGGAMFTGIVFVFLCGPRII
                     NSLRLKQGKGQPIRLDGPQSHLVTKKGTPTMGGLMILSSLMVSTVLWANPANAYVWIV
                     LGVTLGFGLIGFYDDYLKVTKQSHAGFSGRTRLLIEFAIAGIACYAIAVIGRAPQSTS
                     LAFPFFKDLLLDFGWFFVAFAALIVVGAGNAVNLTDGLDGLAIVPVMIAAGCFGAISW
                     AIGNAVFAEYLQVNFVSGAGELAVLCGAILGAGLGFLWFNAPPASIFMGDTGSLALGG
                     LLGTVAVITKHEIVLGIIGGLFVLETVSVIVQVVSFKLTGKRVFRMAPLHHHFEQLGW
                     TEPQIVIRFWIISVVLALAGLSTLKLR"
BASE COUNT         1670 a         2552 c         2557 g         1777 t
ORIGIN      
        1 cgtgcataga gcgcaactca gtcgttaccc gggagttttc tgctatctta ctttccaatt
       61 ccttgttgat ggcgtttaaa gtggccgggc tcataatggt aagcgcttgt gggatgatgg
      121 gccaaatcaa ataggctgtt atcagcgata tggtcgccgt ccccgccttg attaggcctt
      181 gcagcccgta atatggtgcc caaagcgtca cgagacccgc caggtgcgta agaccgcacg
      241 caacgatgaa tgctgcaaaa catccgaaga taccgctgta accaaaatcc gggcgatggt
      301 gaataaagta gacaatacca actggaatcg taaaatagga cagtgcgatg atcgaatcag
      361 aaattgcgtg taacgccaca aggtcagggc gccatagcaa gcaatatccg tgcggaataa
      421 atgaggctgc tccgaaaaga tggtcaataa tggtattcat ggagatgtcc ttacttggtt
      481 ctgacattag agattagcat cttgacgata ccttaaggac gtggaaacga atggcaaaga
      541 gcgagtcgat ttttattctg ctggtcgagg acgatcctga cgatgttttc gtgactcgaa
      601 aggccataca ctcggcgttg caggatcgtt tgacggccga gatttcagtt gctcatgatg
      661 gagctcaagc cattaacatg cttcgcaggc acgcgctgca gaactccatc cccgacctga
      721 ttttgctcga cttgaacatg ccaacaatgg acggccacgc ttttctccgg gcctttcgcg
      781 aggagcactt gccgcgaagg cctcgggttg tggtttttac caccagcttc gatgttgcgc
      841 ttcacgacaa ggcgttgggt gagggggcgg acgaagcgtg ggctaagcct ccgacgttgt
      901 cggagttgca atcggtgctg aaaaaaatct tgactccatt gatcccgcag tcacacccta
      961 cctgatgcac gctgccggcg tgaactttta tcaatctcgg gatcttcggt tcttaggctt
     1021 tgcggtcgac cggcattgac gcatagaaat gggttgcccc aaggccgcgg cgatcctagc
     1081 aaacctccaa tcctgccttg tgatttcccc tcacgccgca cttcgcggca gcggctttgg
     1141 gccccgattt gcagccccta agtaccggta accaacggct aatataacta tgctactcgt
     1201 ccggcgacat ccttcctggc gatcgcaacg aggcttccta gcgcaagacc atccgacatc
     1261 gtccgtgaag taatcggaat ggcttacgga agcgcgcgga agggagattc aagcggtaat
     1321 gagtgcaatt tgtgaaaggt tgacgtgcgt ctccaaacat agagccgcgt tggttggtgt
     1381 tctgttcacc gtgtttattg cgatattatc tttggtctat ttccgcacgg ttactcccat
     1441 gaccgcgggc gttgttgcgc tcacattgct cggcacaggc ctacttgcgc gacttggcac
     1501 aggcctactc gctccacaaa ccgcagctga ggtacaaaag gcacatttgt tgatgctgac
     1561 cctcgaaaat atgtcgcagg ggctatgcgt gtttgataca tcgcagagaa ttattatttc
     1621 caacgagcgc tatcgcgcca tctattccct tcccgaagag ctggtgaagc ccgggaccac
     1681 gctccaccag atcttggatt accggattgt aaacggcggc taccgcgggt cgcccgaaga
     1741 atacctgaac tctcaagatg caaccgaaat ccagcaactc ggcaacgggc ggattgtgga
     1801 ggttctgcgc cgcaaaattg aggacggcgg ctggctcaca atccatgaag acatcacgga
     1861 gcggcgccaa aacgaaggcc gtatctcatt cttggcgcac catgatccgt tgactggact
     1921 cgccaaccga gaagctttca tcgagaagat tgcagactgg tgcacgcgtt atcgccgctg
     1981 gggagaggaa ttcaatgtat tattactgga tctcgaccga tttaagcaaa tcaacgatgc
     2041 attcgggcat cccgccggcg atgttctgct gacacaggtc gcggatcgcc tcagatcgtc
     2101 ggttcgcgag accgacgtgc ttgcccggct cggcggcgac gagtttgcaa ttattcaggc
     2161 cgcgcaatcc aacccgcgcg attctgctca aacgctggca aaccgaatca ttgagttgct
     2221 cgatgaaccg ttctccgtcg acgggaacga tgtgactgtc agcgcgagca tcggaatcac
     2281 gcttgcgccg gaacacggcg tgatcggaga cgatctgctg aaaatggcag atcttgcgct
     2341 tcatcacacg aaatctcaag gtcggaacgg ctgtactttc ttccggtcgg cgctgagcga
     2401 ggcggcggtc gcccgtcaat tgctcgaatc agagttgcgg cgcgcgatcg cgcagaacga
     2461 attcgaactg cactatcaac ctttcgtgga cgcggaaacc tgggcaattt gcggcgccga
     2521 ggcgctcgtg cgttggcgtc acccgcaaaa tggcttgatc tctccggatc gattcatccc
     2581 tgcagcggaa gagagcggcc taatatcaca aatcggggaa tgggtcctgc gatcggcatg
     2641 tgccgaggca gcctcttggc cgacacccac gaaggtagcg attaatcttt cggcggtgca
     2701 gtttcgcaac tccaacctac ttgatgtggt gacccacgcg ctcactgaat ccggtcttcc
     2761 accacagcgg ctcgaactgg aaatcactga aacggccctc gtcgagtacg gctccgaatg
     2821 cttgtcgatg ctggggcagc tcaaatctct gggtatctca attgcgctcg acgactttgg
     2881 gaccggatac tcgtcgctta gccagttgac ggtctttcca tttgataaaa tcaagatcga
     2941 taaatcgttc acgcaaaata tgactaagcg tgccgactgt gccgcaatta tatccgctgt
     3001 cctcgcgctt gctcagagct tgaacattac gaccacggcc gagggtgtcg agaccaagga
     3061 agagttgcgg ttactaacca tggccggcgt gtcaatcgtc caaggctatc tgattaagcg
     3121 tgccggcccg gcctcagaac ttgacttcca tactctctcg attcgaccag tggcggaaaa
     3181 tgtcgcttag caccaccgag ccgccgatgg catcgccaga accgagcatc ccacccccga
     3241 tcagaaatcc ggcctctcag cctccgggat cgggaacagg ccctgattga aataatcctt
     3301 attgttctcg gcgcagatcg tctctttcat cggagagtcg accttgaacc agcgctgctg
     3361 catggtgagc ggcgcattga acgtatcggg atcttccact ttcacgatcg cggttaaatt
     3421 tttgccatcc gcttcgatgg taaagcgctc cacgacatgc aacttctcag tgtgcggcgt
     3481 gcgaaaatta tcgatatagc tgtttttggt ggagagcccg atggtgtcga cgaccaacgt
     3541 gccgccatcc tcataatgcc cgatcgactc gccaaaccac gacggcgtca catattccga
     3601 atgttggtcg gtgagaaaaa tgcggcgcac catgtggtcg cgctgccaca tcatccagac
     3661 ctctttgggg gtctggatga aataaaccgg ctcgaaagga tatagcagtt gacccggaac
     3721 tccacccgga tagcaacggg cctgcgcggc gaagggtatg gccatctcgc tgcgcagcgc
     3781 gtcgtcgttc gacgcctgca tctgtgccgc ggcccacggc ttgaggaccg gatctttcgc
     3841 atttcctata cgtttcgtcg gttgcgtacc ggtctgcgct gcttcgacgt tgctggtgaa
     3901 tggatgggcg ggatcgggct taatcggtcc atggccatat cccggcggcg gatcgcgcca
     3961 atccgctaca ttcgactgcc agccgaaatc ggccgaagca agcggtggaa cggcattatt
     4021 cggttgcgca gccgaggtaa acgcagctgt ggcgaccaat cccgggataa cacaaccggc
     4081 aagcgcaagc cgctgtgccg ataaggtatt gtttgatctg ggcatgatcc ctcctcaaga
     4141 gctccgacgc attcgtgatt ttggtaacca tcatatgcca accgcgatgg aagccaaaat
     4201 cggctagtcg tcattgtcgg atgagcgcag caaagtccgg gtcaacgtat caatgccgca
     4261 atgcggcccc aggtttcgca gctactcacc cggcctggag ccctatcacc gccgctcaag
     4321 cggcctcctt gaaaccgagt gccatgcctc tgcgcgggat tcgagtgcaa cctcccgcgc
     4381 gtaaagacgg cctgcacaag agcgtcctgg ccccacgggc aggttgcggc gaaaccttat
     4441 tgctataaac cggccccttg ggcggcttcc cgcccgattc gaggacaagc aacgccgatg
     4501 atgctgcgcg acttattaat cggcgaggcc cgctttgaga agcgatttga ggcacttcgc
     4561 gtgagcggga tttcggccga cagccgcgcc gtaaagccgg gcttcgtgtt cgccgccgtg
     4621 ccgggcacca gggctgacgg actaacttat ctgccgcagg cgatcgcggc gggtgccgtc
     4681 gccgtcatgg ccgaacgcat gccatccgcc ccgctgccgg accacgttgc gttggtggac
     4741 gtacccaacg tacgtcgcgc gctggcgctc gcagcagcga agttctttcc gcgccagccg
     4801 tccaccatcg cggccgtcac gggcactagc gggaagactt cggtcgcggc cttcacacgc
     4861 cagatttgga ccgctcgcgg gcacgtagcc gctagcatcg gcaccatcgg ggtggtgacg
     4921 ccggcaggcg aagtgtacgg cgcattgacg acgcccgacc cggtcgagct tcatcgcgtc
     4981 gtcgacggcc tcgccggcga ggggatcacc catctggcgc tcgaagcctc gtctcatggg
     5041 ctcgaccagc accgcctcga tggtttgcat gtcggcatcg cgagcttcac caatatcagt
     5101 cgcgaccatc tcgactatca cggcactctc gaagcctatc tgcgggccaa gctgatcctg
     5161 ttccaacatt tggtggctca ggacggtgct gccgtgatcg cggttgacca cgccttcgcc
     5221 acagaagtgg tggatgcagc acgcaggcgc ggcctacgcg tcgtcgaggt cgggcggacg
     5281 gcccgagaca ttcgggttat cgattgcgtc atcgagggat tttcacaagc tttgacgatc
     5341 gagcataacg atatgagaca tcaagtgcgg ttgccgctgg ttggcgcgtt tcaggtggaa
     5401 aatgcgctgg tggcggcggg tcaagcgatc gcgggcggcg aagagccagc cgcagttttc
     5461 gccacgctct cagggctgac gggtgccaag ggccggctcg aactggtcgg ccgcaaatcc
     5521 ggtgcgccga tcttcatcga ctatgcgcat aaacccgatg cgcttgccaa agcccttgac
     5581 gcgctgcgtc cctacgtgag ccgcaggctt gtcgtggcgt tcggcgctgg cggcgaccgc
     5641 gacgccggca agcggccgtt gatgggagcg atcgcggccg agaaggcgga ccgcgtcatc
     5701 gtcaccgacg acaacccgcg cagcgaagac cccagcgcca tccgtgcagc gattctgcgg
     5761 ggtgcgcccg acgcggacga gatcggcgac cgccatgagg cgatccgtcg cgccgtggcc
     5821 gatctccaag ccggcgacgt gctgttggtt gccggcaagg gccacgaaac cggtcagatc
     5881 atcgggcaaa aaaccgtgcc gttcagcgac cacgaggcgg tccgggccgc gcttgcggtc
     5941 ggggagcagc cgtgacagcg ccgctgtgga cgctcgacgc catcgcggcc gctacgcgtg
     6001 cgcagtgcgt cggaccgctg ccgcagatcg tcacgggtat ttccatcgac agccgcaccg
     6061 tcacggccgg cgaggctttc ttcgccatca agggcgacac ccatgatggc catgactttg
     6121 tcgccgcagc gctggagcgc agcgcggggc tcgcggtcgt ggcgtggaac cgggcgggtg
     6181 gctacggcag cgatgcgccg ctcatcgtgg tcgaggatgt gctcgaagcg ctgcgcgata
     6241 tcgcgcgtgc tgcgcggctg cgttcagctg caaaaatcgt ggcggtgacc ggatcagttg
     6301 gcaagacctc gaccaaggag gcgctagtac tggcgctggc gtcgagcgga gagacacacg
     6361 cctcggcggc gtcgttcaac aaccactggg gggtgccgtt gtcactcgcg cgcatggcgc
     6421 aaacggcgcg ctacggggtg ttcgagatcg gcatgaacca tgccggcgaa atcaccccac
     6481 tggtgcacat ggtacgtcct caggtggcga tcgtcacagc ggtcgagcca gtgcatcttg
     6541 aattcttcgc ctccgtcgca gcgatcgcgg acgccaaggc cgagatcttt aaaggagttg
     6601 agcgcggcgg cgccgccgtg gtcaaccgcg acaatcggca tttcgcgcgc ctacggcggc
     6661 gcgccgagga agcaggggtg caacagttcg tttctttcgg tgaacacgct ggcgccgacg
     6721 cgcgccttct caaatgcgcg ctgcacccgg attgctcaac cgtcgaggca acgattctag
     6781 gccaagctgt cacctacaag attggcgcac cgggccggca tctggtgacg aattcgctcg
     6841 ctgtgctggc ggccgcgtgc attgtgggcg ccgacctcgc gcgcgcagcg cttgccttgg
     6901 cccggcagat cccggccgcc gggcgcggca cccgggtgac gctcgagttg cctgaggggc
     6961 gggcgctcgt catcgacgaa agctacaatg ccaacccagc atccatgcga gcagcactcg
     7021 ccctcctggg ccaggcgccg ctcgggccgg gcggacggcg cattgccgtc atcggcgaca
     7081 tgctcgaatt gggcccaacc agcgaggacc tacatcgcgg cctcgtcgag gcgatccgcc
     7141 acaacggcat cgatctcgtc tattgcgccg gccctctgat ggcggcactg tgggaggcgc
     7201 ttccctccgc gcgtcgcggc ggctatgcaa aaaccgcggc tgagctagag ccgctggtgc
     7261 tggcggtggt tcgcgccggc gacgccctca tggtcaaggc atcggccggc tcccatttcg
     7321 ggccgatcgt caaggcgctg gtgcggcgcc attccgtcac cacggcgccc gaaccggcgc
     7381 aagcgcgggg ctgatcgcat gttttatcgg ctgatcgaat tttccgacac cgtctcggtc
     7441 ctcaatgtgt tccgctacat cacgttccgc actggcggcg cgatgttcac cggaatcgtc
     7501 tttgtgttct tgtgcggccc gcgcattatt aacagccttc gcctaaaaca gggcaaaggt
     7561 cagccgatcc gccttgacgg gccgcaatcc catctcgtca ccaagaaggg tacccccact
     7621 atggggggac tgatgatctt gtcgagcctc atggtgtcaa cggtattgtg ggccaaccct
     7681 gccaatgcct acgtctggat cgtcctcggg gtgacgctcg gcttcggcct catcggtttc
     7741 tacgacgatt atctcaaggt gacgaagcaa agccatgcgg gtttttccgg gcgcacccgg
     7801 ctcttgatcg aattcgccat tgcgggaatc gcctgctacg ccatcgccgt cattggccgc
     7861 gcgccgcaat cgacgtcgct ggcgtttcct ttcttcaagg atttgctgct cgatttcgga
     7921 tggttctttg tcgcgttcgc agctctcatc gtggtcggcg ccggcaatgc tgttaacctg
     7981 acggacggtc tcgacggcct tgctatcgtg ccggtcatga tcgcggccgg ctgcttcggc
     8041 gccatctcct gggcgatcgg caacgcggtg tttgccgaat atctgcaggt caatttcgta
     8101 tccggcgccg gcgagctcgc ggtgctgtgt ggggccatcc tgggcgccgg tctcggcttt
     8161 ttgtggttca atgctccgcc ggcctcgatc ttcatgggtg acaccggctc actggcgctc
     8221 ggcggattgc tcggcaccgt cgcagtcatc accaagcatg agatcgtgct cggcatcatc
     8281 ggcggactgt tcgtacttga gacggtttcg gtcatcgttc aggttgtatc gttcaaattg
     8341 accggcaaac gcgtgtttcg aatggcaccg ctccaccatc acttcgagca actcggctgg
     8401 accgagccgc agatcgtcat ccgcttctgg atcatctcgg tggtgctggc cctcgccgga
     8461 ttatcgacgc ttaagttgag atgaggtcgc gatgatagcc gcaaaggcag cttgctattg
     8521 cctcccccgc ttgccgggga gggttggggt gggggc
//
LOCUS       DATILV010000944         4156 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2791222, whole genome shotgun sequence.
ACCESSION   DATILV010000944 DATILV010000000
VERSION     DATILV010000944.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4156
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2791222"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(392..850)
                     /locus_tag="VLJ17_22740"
     CDS             complement(392..850)
                     /locus_tag="VLJ17_22740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25830.1"
                     /translation="MFTAEQYRAKAAEYSGLLDTPRSSNETKEFRNLEQAYATMADNE
                     EWLARNTDKVVPAAKSASQYDIVPASQTDRNKRAVLVDEHEHVLRCLGAAVIMRWSTL
                     PTKLQRELFDHASSLDDFDRDDSISDLEQTAKLKERIARFLHHHNGKQIQ"
     gene            complement(1222..1479)
                     /locus_tag="VLJ17_22745"
     CDS             complement(1222..1479)
                     /locus_tag="VLJ17_22745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014439765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1488 domain-containing protein"
                     /protein_id="HSV25831.1"
                     /translation="MNFPNRSRSYDGTRNAVRFWGYDSAMEASFFVTKDALKRVQPDM
                     RSDEAGLLSAFDSNRDLIYATAFKVYARGHKGSYDLVSADF"
     gene            complement(1476..2078)
                     /locus_tag="VLJ17_22750"
     CDS             complement(1476..2078)
                     /locus_tag="VLJ17_22750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25832.1"
                     /translation="MKLRTTIITAAGAAGLFGAVMAFAAPASKTGFDAEIARSAQAML
                     DEGRKIFRYETFGSEAFWGDALQLHKAIAGEKNSGVGPGVSPKTALSVGLKVDADVLP
                     DSFKKQLAAGKVNLDVPATTIALLKLNAVVGVTALANPDGGVESIGIQCAFCHSTVDN
                     SFAPGIYARRKNRSPQSIARIIVNSALQPYERNGALRPWH"
     gene            2846..3250
                     /locus_tag="VLJ17_22755"
     CDS             2846..3250
                     /locus_tag="VLJ17_22755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25833.1"
                     /translation="MWRGTLAIALITIGSFFISLEGIGMAPAAAQDVMVTDAQITQLK
                     SVLKLTLAQERLWRPVETALRALLDRRVPQETVAAGFVHRARTRVAGLMLNAVALRRL
                     ASVAQPLINSLDQRQKDDGLTFMRTVGMASLF"
     gene            complement(3869..>4156)
                     /locus_tag="VLJ17_22760"
     CDS             complement(3869..>4156)
                     /locus_tag="VLJ17_22760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25834.1"
                     /translation="GRNAAFSSKLFQECVHRIDTPGTRPWRCTRVLGRKMADAKLSAS
                     PDLLRCDCYPVMGSILKLIECPVDYNSGPIAGSAPVPQTQSIKLNNSNLTP"
BASE COUNT          817 a         1175 c         1208 g          956 t
ORIGIN      
        1 tgctttcacg gctgtcgtgg tcgacaacac cggggcggac cacgaaggtg tgaccgcacc
       61 gagagcgacc gtaccggcga ttgcgatgac gagcgcgccc ttcattgttt gattgttcat
      121 agtcatgtcc tctcgtttgc gcgccgacat cggcggcaaa attgtcccgt tcgtcccatg
      181 acgcaacgag cagtgctgcc ggaaaagcga tatttggcag ttcgaatggc cgtggctttt
      241 tgttcgttca ccgatccagc cgcggggtgg ttacccttgt gctgctgatc gcggccggga
      301 cttccttttt atgtatctcg aaggaggagc cccgtcggaa acaatgcgcg accaggcttt
      361 tcgttccaaa ttcctcagcg ctggcgcggc cttattggat ctgcttgccg ttgtgatgat
      421 gaaggaaacg agcgatccgt tccttcaact tggccgtttg ctcgaggtca ctgatggaat
      481 cgtcgcgatc gaaatcatcg agggaactgg cgtggtcgaa aagttcacgc tgaagcttgg
      541 tggggagagt actccaccgc attatgactg ccgcccccag gcaccgcaga acatgctcat
      601 gttcgtcgac gaggacagca cgcttgttcc gatcggtttg cgatgccggc acgatatcgt
      661 attgcgacgc cgacttcgca gccggcacga ccttatcggt attgcgcgcc agccattctt
      721 cgttgtcggc cattgttgca taggcctgtt ccagattgcg aaattccttg gtctcgttgg
      781 acgaacgcgg ggtgtcgagc aatccgctgt attcggctgc tttcgcgcgg tactgctctg
      841 ccgtgaacat gtgacacgac ctttctttgg caggcgagag cacgattggt ctctcagcca
      901 ccggcgcctt tgttgagtga tcggtcggtg atgaattgca tatggggacg atggagccat
      961 tcagccacct ttattttcac gccgccgggg atctatagcc gacctgcgtg tctaaaatgg
     1021 cccaatttcg agcaaacccg agatcgctat tgcgcgctaa atgttagagc gcggaccgca
     1081 gacaaggatc tgcgcaagct ttattgcttt gcgcaaaacc ggtgtccgct tttgctgacc
     1141 gcgctctgcg ggtctattat cgatgtgcag aaagaacacg ccggattgtc agccgccaaa
     1201 ccccgcgcga ccggcgctct ttcagaagtc ggcgctaacc agatcgtaag agcctttgtg
     1261 gccgcgcgca tagactttga acgcggtcgc gtaaatcaag tcgcgattcg aatcaaaagc
     1321 gctgagtagt ccagcctcgt cggaccgcat gtcgggttga acacgcttca gcgcatcttt
     1381 ggtcacgaag aacgaggcct ccatcgcgct gtcatacccc caaaaacgta cagcgtttcg
     1441 ggtgccatca tagctgcggc ttcgatttgg aaagttcagt gccacggtcg tagcgcgccg
     1501 tttcgctcgt aaggttggag ggctgagttt acgatgatac gagcaattga ttgagggctc
     1561 cggtttttcc ttcgcgcgta gatgccaggc gcgaacgagt tgtcgacggt tgagtggcaa
     1621 aacgcgcact ggatgccgat cgactcgacg ccgccgtcgg gattggcgag ggccgtgact
     1681 ccgacgaccg cgttcaactt gaggagggcg atcgtcgtcg ctggaacgtc caggttgacc
     1741 ttgcctgccg cgagctgttt tttgaaagag tccggcagca cgtccgcgtc cacctttagg
     1801 cctaccgaca gcgcggtttt cggcgagacg ccgggcccga cgccgctgtt cttctcgccg
     1861 gcgatagctt tgtgcagctg gagcgcatcg ccccagaagg cctcgctccc gaacgtctcg
     1921 tagcggaaga tcttcctgcc ctcgtcgagc atcgcctgtg cggagcgcgc gatttccgca
     1981 tcgaagcctg tcttcgaggc gggggcagcg aaagccatca cagcgccaaa caaaccagcg
     2041 gcgcccgcag ctgtaatgat cgtggttctc aacttcattg tgctgtccac tcgacgattt
     2101 tttttgcagc gtgcaattgg tcgcgttggg ggactcaagg atccctaccg ctgcaattac
     2161 agctggggtt gctggacgct tcgattaggg gaaattcatg gaggcggcca acgtattgag
     2221 gctaggctca tacccgagca aaaagctgta tcaaattgac cactcatttc cgtcgcgtat
     2281 gacgacgggt ctctcgccag tattcaaagc tccgcttcca tctccttgac agcgcggagc
     2341 cacgaactgc tggtccctgg aagggataga acgcggacgt gcacgttcca atccgagata
     2401 ttcctttcga cgggaacttt cgtctgtaag cagcgtttcc tcaaatgggc caacgaccca
     2461 tcgcggagcc gccagtcgtt caccaagtct gccaatgtgc gcgatgccgc gattctccaa
     2521 ggccgcagtc gccgcgattg ccacagttgc attgtactct aagacgtcag ccctcacgtc
     2581 gagccacgcc gcaacgcgcc accaaaggtg atcgtgtcga gctctggacc ttcggcccta
     2641 cctgatcgca gcgcgcgtgg ctctattacg aacccgattg tctgagaaca ggcgcctaac
     2701 gaggtacgcg acgaaccgcg gaccgacagg tcactcggga gtggtttcct cgcttgcctt
     2761 ggtcactggc ttcgttctcg cctttcctgc ggctcacgca atgtggtgtt gcggttgatc
     2821 gggccgtaga aactcggaga atcccatgtg gaggggaacg ctcgcgattg cgctcataac
     2881 gatcggatcg ttcttcattt cgcttgaggg tatcggaatg gcgccggcgg cggcgcagga
     2941 cgtcatggta accgacgccc agatcactca actgaagagc gtgttgaaat tgacgctggc
     3001 gcaggagcgc ctttggcgtc cggtcgagac agccttgcgc gctctgctgg atcgacgggt
     3061 cccgcaggag acggtcgccg ccggcttcgt tcatcgtgcg cggacgcgcg tggcgggctt
     3121 gatgctcaac gccgttgcct tgcggcggct cgcctcagtg gcccaaccgc tcattaacag
     3181 cctggaccaa aggcagaagg acgatgggct cactttcatg cgcaccgtgg ggatggcctc
     3241 gctgttttga tcgcggcggc tcttcgttca gtccaacgct ggccggcgcg tgacagccct
     3301 acaagttgcg tcgttcacaa atgccgctca ttgcactgat gaagccgggc actccttgca
     3361 gggcaactcc gggcaaggct cagttaggct ctagtagaag tcgtctgtcg tccatatatc
     3421 aactcaaggg agaacgtcag gaggatcgcc agatgtggtt ctatgtccaa atggcgctac
     3481 cgttgttgac cgtcggtttg gctgctgcga tctgctttag cgtggcatca ttcatcgtgg
     3541 cacacgcaaa gcctcatccg taagccttat ggcgctcata tcggaggcca aaatcaggtg
     3601 aaccttttca aggagtaagt catgataagg aattatgtga tttctgatgt cgcaacaaaa
     3661 accgcatatt tttctctggt ggcggcggca tttgtatttg ttgctatgct tttgatgacc
     3721 gacatgcatc cctaaagcca ccaacgatgg ccgaccgttc acgcgtcagc tgcttcacga
     3781 agaagttttg gcggctgggc gttatcgagt acaatggctg tcgccacttc gacagttcat
     3841 gttgaacgtc gttctgcacg actgagcgtc atggagtgag attcgagttg ttcaatttta
     3901 tagattgcgt ttgagggacg ggcgcactcc ccgcaatcgg cccgctgttg tagtcaaccg
     3961 ggcattcaat caacttcaaa atggacccca taacaggata gcaatcgcac cgaagcaggt
     4021 cgggcgaagc ggagagcttt gcatccgcca ttttacgacc caagactctc gtgcaccgcc
     4081 acggacgagt gcccggtgtg tcgatccggt gcacgcattc ttgaaacagc ttgctggaga
     4141 acgcggcgtt gcggcc
//
LOCUS       DATILV010000945         3501 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1256638, whole genome shotgun sequence.
ACCESSION   DATILV010000945 DATILV010000000
VERSION     DATILV010000945.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3501)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3501)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3501
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1256638"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            270..908
                     /locus_tag="VLJ17_22765"
     CDS             270..908
                     /locus_tag="VLJ17_22765"
                     /inference="COORDINATES: protein motif:HMM:NF025214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV25835.1"
                     /translation="MTPVPKSAPFKVSQVFADALALHTHGRLAEAESLYSQVLAHRPD
                     HFDALQMLSVVKLAKGQPAEALRLTSEAMRLRKPSPQILLNYGMILHALNRIDETLAS
                     FDAALKQKSRFAAGLSDVFLDSIGWSGCNSALECLTRALPIVTFEGATMRGRHSAAIL
                     RMIGVEDTIATTVDDYVAIATRLGKDAQFRRMAENRHKSYRDRAQWRRWKIS"
     gene            1002..1847
                     /locus_tag="VLJ17_22770"
     CDS             1002..1847
                     /locus_tag="VLJ17_22770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HSV25836.1"
                     /translation="MRFEGTSAYVATDDLKIAVNAAITLERPLLVKGEPGTGKTVLAL
                     EIAKAIGAPLIEWHIKSTTKALQGLYEYDAVSRLRDSQLGDERVKDIRNYIKRGKLWD
                     AFVADERPVLLIDEIDKADIEFPNDLLQELDRMEFFVYETSETVKARRRPIVVITSNN
                     EKELPDAFLRRCFFHYIRFPDTETMRAIIDVHFPGIKQRLVAEALKLFYEIREVPGMK
                     KKPSTSELLDWLKLLMAEDIGPETLRERDPKKLIPPLHGALIKNEQDVHLFERLAFMA
                     RREGR"
     gene            complement(1849..3207)
                     /locus_tag="VLJ17_22775"
     CDS             complement(1849..3207)
                     /locus_tag="VLJ17_22775"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HSV25837.1"
                     /translation="MEAGWYETNSVPRPERQRLSLDLDVDVCVVGAGLAGLTVAREIA
                     QRGWSVVVLEGGQVAWAASGRNMGFVLPGFSEDIDGIIERVGLDHAKQLWALSEQGLD
                     YVRRTILDTRMPGVDLINGWLHVSKTDNPAELRNEVERMRWIGADVEYWPVDRVRDQL
                     RSPRYFSAVHYRQAFHIDPYNYAQGLAALAEKAGARIFEDSPAVSLDPAGVRKRIVTP
                     AGRVRAAHVVLAGNVHLGALMPRLAATLLPITTYVMVTEPIGETLHEVVRYRGAVSDT
                     DRADNHYRIVGGDRLQWLGRMRAWEASPGLIARGLVNDVQRTFPELGKVAVAHVWRGT
                     LGRTVHRMPQIGEIERGLWLASGFGGHGLNNTAMAGELVARGIIDGDQTWRLFAPYEL
                     VWAGGVLGRMVAQGIYWGTRPVDRIEQEVARYRALSRARKAARSVPQHAGPVSDSDQP
                     SL"
     gene            3311..>3501
                     /locus_tag="VLJ17_22780"
     CDS             3311..>3501
                     /locus_tag="VLJ17_22780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HSV25838.1"
                     /translation="MTMRRLLLFRHAKAEQSEPGMEDRARKLMERGWKDAAKVGAYMA
                     SHGLIPDQVITSPSSRTLET"
BASE COUNT          767 a         1085 c          979 g          670 t
ORIGIN      
        1 gcctcactga atttggccgt atatgcgagc gccgacaaag ctgcgccggc agtcaaaaga
       61 gagcgccgat tcaacataaa accgtctcct ctgttatcgc tcgcagcacc cgtaatttca
      121 cccgagataa agtgtccggg ccaaaacaca agataactca cggtcgcgcc gcaatcacgt
      181 tcccgttaaa ggccccagcc catcccaaaa cttcgcgctg gacgactcag tggagctttt
      241 ttacctctcg atacaagggg atgaagctca tgacgcccgt gccgaagtct gcgccgttca
      301 aagtttcgca agtctttgcg gacgcgctcg cgctgcatac acacgggcgc ctggccgagg
      361 ccgaaagtct ttattcgcag gtcctggctc acaggcctga ccatttcgac gctttgcaga
      421 tgctgagcgt cgtcaagctt gccaagggcc agcccgccga agcgcttcgc cttacttccg
      481 aggccatgcg cctgcgcaaa ccctcgccgc agattctgct gaactacgga atgatactgc
      541 acgctctcaa tcgtatcgac gaaacactgg cgagcttcga tgcagcacta aaacagaaat
      601 ccagatttgc cgccgggctt tccgacgtgt ttctcgacag cataggttgg tcgggttgca
      661 actcggcgct ggagtgcctc acgcgagcgc tgccgattgt aactttcgaa ggcgcgacga
      721 tgcgcggcag gcatagcgcc gcgatcctgc ggatgatcgg tgtcgaggac acgattgcaa
      781 cgacggttga cgactatgtc gcgattgcta cgcgcctcgg taaggacgca cagttccgac
      841 gaatggccga aaacaggcac aagagttatc gcgatcgcgc ccagtggcgg cgttggaaga
      901 tttcctagaa aaggcagtgc gcggctgatc gctcgtcgaa gccctttgtc gcgcagcatc
      961 ttccctatat gaatacgcga accaagcaca ggaagcattg tatgcgtttt gaaggcacca
     1021 gcgcttatgt ggcgaccgac gacctgaaaa tagcagtcaa cgccgccatc accctcgaac
     1081 ggccgcttct ggtcaaagga gagccgggca ccggcaaaac ggtcctagca ttggaaatcg
     1141 ccaaggcaat cggggcgcca ctgatcgagt ggcatatcaa atccaccacc aaggcgctgc
     1201 aaggtctgta cgaatatgat gcggtgtcgc gcttgcgcga cagtcaactc ggtgacgagc
     1261 gcgtcaagga cattcgcaac tacatcaaac ggggcaaatt atgggatgcc ttcgtcgccg
     1321 acgagcgccc ggtattgctg atcgacgaga tcgacaaagc cgacatcgaa ttccccaacg
     1381 acctgctgca agagctcgat cgcatggagt tttttgtcta cgagacgagc gaaacggtga
     1441 aggcgcggcg gcggccaatc gtcgtcatca cctcgaacaa cgagaaagaa ttgcctgacg
     1501 cctttctgcg ccggtgcttc ttccactaca ttcggtttcc ggacacggag accatgcgcg
     1561 caattatcga cgtgcatttc cccggcatta aacagcgatt ggtcgcggag gccctaaaac
     1621 tgttctacga aatccgcgaa gtacccggga tgaagaaaaa gccttcgacc tcggagctgc
     1681 tcgattggct caagcttttg atggccgaag atatcgggcc cgagacgttg cgcgaacgcg
     1741 acccgaagaa gctcatccct cccctgcacg gcgcgctgat caagaacgaa caggacgtgc
     1801 atctgttcga aaggcttgcc tttatggcgc ggcgggaagg ccggtagtct agaggctcgg
     1861 ctgatcggaa tcggaaacgg gccctgcatg ctgtggcact gaccgtgcgg ccttgcgggc
     1921 gcgagacagt gcacgatagc gcgcaacttc ctgttcaatt cgatctacag gccgcgtacc
     1981 ccagtaaatt ccctgtgcca ccatgcggcc aagcacacca ccggcccaaa ccagttcgta
     2041 aggggcgaac aggcgccacg tttgatcgcc atcgatgatg ccgcgcgcaa cgagttcgcc
     2101 ggccatcgcc gtattgttga gaccatggcc tccaaacccg ctcgccagcc ataggccgcg
     2161 ttcgatttcg ccgatttgcg gcatgcgatg aaccgtacgg cccaatgtcc ctcgccatac
     2221 gtgcgcgacg gccactttgc cgagctcggg gaaggtgcgc tgaacgtcgt tgacgagtcc
     2281 ccgcgcgatc agaccaggac ttgcctccca tgcccgcatc cgccccagcc actggagccg
     2341 atcacctccg acaatgcggt agtggttgtc ggcacgatcg gtatcgctga cggccccacg
     2401 atagcgcacc acctcgtgca gggtctctcc aatcggctcc gtaaccatca catacgtcgt
     2461 tatgggcaga agagtcgctg cgaggcgcgg catgagtgcg ccgagatgga cattgccggc
     2521 gagcaccaca tgcgcggcac gcactcggcc ggcaggcgtg acaatgcgtt tgcgcacgcc
     2581 cgcgggatcg agtgagaccg cgggcgaatc ctcgaagatg cgggctccag ccttctcagc
     2641 cagcgcagcc aagccctggg cataattgta gggatcgatg tgaaatgcct gcctgtaatg
     2701 tacggcgctg aaatatcgcg gactgcgcag ttgatcgcgc acgcggtcga caggccagta
     2761 ctcgacatcg gctccaatcc agcgcatgcg ctcaacttca ttgcgcagct ccgcaggatt
     2821 gtcggtcttc gaaacgtgca gccatccgtt gatcagatca acgccgggca tccgcgtgtc
     2881 gaggattgtg cgccgtacgt aatcgagccc ctgctccgac aacgcccaga gctgtttggc
     2941 gtgatcaagt ccgacccgct cgatgatgcc gtcaatgtct tcggagaacc ccggaagtac
     3001 gaagcccatg ttgcgacccg acgccgccca tgcgacctgc cctccttcca ggacgacaac
     3061 cgaccacccc cgctgggcga tctcccgcgc aacggtcagg ccggcaagac cggcgccaac
     3121 cacgcagaca tcgacgtcga ggtcgagact aagccgttga cgttccggac gcggaacgct
     3181 gttggtttcg taccagcccg cttccatgct ctcacttttg ttcgttgcgt tcgctacctg
     3241 gttgcatgtc ggcgctctgc tcccgacgaa tgcatgctaa actggttttt ctgtagccga
     3301 aatccatagc atgaccatgc gacgactttt gttatttcgt cacgccaaag ctgagcaatc
     3361 cgaaccgggg atggaagacc gcgcacgtaa actaatggaa cgaggctgga aggacgctgc
     3421 aaaagtcggc gcttatatgg cctcccatgg cctcatcccc gaccaggtta tcacatcacc
     3481 ctcttcgcga accctcgaaa c
//
LOCUS       DATILV010000946         1614 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4574908, whole genome shotgun sequence.
ACCESSION   DATILV010000946 DATILV010000000
VERSION     DATILV010000946.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4574908"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..567
                     /locus_tag="VLJ17_22785"
     CDS             <1..567
                     /locus_tag="VLJ17_22785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25839.1"
                     /translation="IDDALNRIPAHDEQADHCLNTLFFDAADYMIRASNPIGRRVVIA
                     ITGVTRNFDCPNSPSGKSAALAIYESGSVVCGIIPKTSDQGLENGIMIWATRIGKLQG
                     AAYLDIQTLANETGGELLADRPENLNTTFQTLMDHLRSRYNLAFVSSNKKRDGTTRKL
                     KIDLAPPLQKSQGKLVVKARRSYVAPTR"
     gene            735..1343
                     /locus_tag="VLJ17_22790"
     CDS             735..1343
                     /locus_tag="VLJ17_22790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25840.1"
                     /translation="MPRMIRSARTFCRQIIFASCLLTLALAVGGCGKSDGGGSMKVKS
                     PATGDKDLLQKSGYAFVIIKTFTDTSGKITTASSYRVYAANYDLDAGNFAMTLDKPLS
                     SDDQVRVVFSLVGEQGTNDKSPLMTGTYPAKAEKFMKVEDVTIVSRKGGTDYKNWLDR
                     STLAGEARVSSFSGDSISGEVDLTSGAISIKGPFTAKVLMRK"
BASE COUNT          347 a          445 c          455 g          367 t
ORIGIN      
        1 atcgacgacg cgctgaatcg catcccggcc cacgatgagc aggcggacca ctgtcttaac
       61 actctgttct ttgacgccgc ggattatatg atcagagcga gcaatccaat cggccggcgg
      121 gtggtgattg cgatcaccgg cgtcacccgc aacttcgatt gccccaacag cccgtcgggc
      181 aagtccgccg ccctggcgat ctatgaatcc ggcagcgtgg tgtgcggcat catcccaaag
      241 acatcggacc aggggttgga aaacggcatc atgatttggg ccacgcgaat tgggaagttg
      301 cagggcgctg cctatctcga cattcagact ctggcgaatg aaactggtgg cgagctgctc
      361 gctgacaggc cggagaatct caacaccacc tttcaaacac tgatggatca tttgcgcagc
      421 cgctacaacc tggcgtttgt gtcttcaaac aagaaacgcg acggtaccac gcgcaagctc
      481 aagatcgatt tggcgccgcc acttcaaaag tcgcagggca agttagtcgt caaagcgcgc
      541 cggagttacg tcgcacctac acggtgaaca aacagtgcgc tcccttttct ttttggagag
      601 gtctggagtg attaattgag cgaagaatcg ctcggcaagg cgaaatggta ttgactcgcc
      661 agtccttttc ccgtaaaacg ctcatcactt cacctgcctc atcgttttgc actatcaggc
      721 tgaggagatg aaacatgccc cggatgataa gatctgccag aaccttttgc cggcaaatca
      781 ttttcgcttc gtgcttgctc acgcttgcgc tggccgttgg cggctgtggc aaaagcgacg
      841 gcggcgggag catgaaggtg aaatctccag ctaccggcga taaggatctg ctgcagaagt
      901 ccggttacgc gttcgtcatt atcaagacgt ttaccgatac atcggggaag atcacaactg
      961 cctcgagcta tcgtgtctat gcggccaact atgacctcga cgccggaaat tttgccatga
     1021 ccctggacaa gccgctttct tccgacgacc aggtccgcgt agtgttcagt ctggtgggtg
     1081 agcaaggcac caacgacaaa tcaccgctaa tgactggaac ctatccagcc aaagcagaaa
     1141 agtttatgaa agtggaagat gtcacgatcg tttcgcgcaa gggcggaacg gactataaga
     1201 attggctcga tcgcagcacg ctggccggtg aagcaagagt gagttcgttt tctggcgatt
     1261 cgatctccgg tgaagttgat ttgaccagcg gagcaatctc gatcaaggga ccgttcaccg
     1321 ctaaagttct gatgaggaaa tagaattagc attacgagcc ggcgcctcaa cgatcgccgg
     1381 ctcgaaatgt tttgccttct gcttactgcc tactgcttat taattcccgg gtttcttgcg
     1441 tccacctttc tggtcaggtt gcgcctcttg tttctgcggc ggcggtgctt gtggccgcgc
     1501 ctgcgctggt cgtggctgtg actgcgcttg cggcggcctt ggctgcggtt gcgcctgcac
     1561 cggcctttgc tgacgcatct cttgcggagc cgcgcgcggc gcggcttgct gcgg
//
LOCUS       DATILV010000947         6111 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1004153, whole genome shotgun sequence.
ACCESSION   DATILV010000947 DATILV010000000
VERSION     DATILV010000947.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6111)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6111)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6111
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1004153"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..832)
                     /gene="rsmI"
                     /locus_tag="VLJ17_22795"
     CDS             complement(<1..832)
                     /gene="rsmI"
                     /locus_tag="VLJ17_22795"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016841493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HSV25841.1"
                     /translation="MTVRTPLTVPTQKSKFFRVFGEDIAARELPAGLYLVATPIGNLS
                     DVTLRALETLAGVEAIACEDSRVTRRLLERYAIATPLLSYHDHNAETVRPKILARLEA
                     SAAIALVSDAGTPLVSDPGFKLVQAAQAAGHAVTAVPGASAVLTALTTSGLPTDRFFF
                     EGFLPSRETARRARIDELANIPATLIFFETGPRIAAMLSDLAARFNGRTAAVCRELTK
                     LHEEIRRGDVAALALAYQSGAETRGEFVVVIGPPTKSEHLEAIDLDDIIKRTLSTASL
                     K"
     gene            964..2199
                     /locus_tag="VLJ17_22800"
     CDS             964..2199
                     /locus_tag="VLJ17_22800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013912717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator"
                     /protein_id="HSV25842.1"
                     /translation="MSFEGSMSEAYSVRVLSLRRPTATVATFVAAISLAACSGSLNWK
                     DVSSSKTAPSAAIAPPPVPKLGSGDVKVGLILPLSASGNAGTAGQAMRNAAEMALAEF
                     NDPNVQLLPKDDNGTGQGAQLAVQQAIDEGAQIVLGPLFAHSVTSAKPIVRNRGIPMI
                     AFSTDANVASAGVYLLSFLPESDVDRVVAYAVSQGKHSFVGLVPSNAYGSVVEGEFKQ
                     AVARRGGQIMALEHYADDRSKIGEAVRLVAQAAGRADALFIPDSGEAVNNVIAALSDA
                     GVNPRQFAMLGTQLWDDPKIFSNPLLEGGWYPAPDPTGFRAFADRYRGRYRLDPPRPA
                     TLAYDAVALVAALVKTQGAQRITNEVLTNPSGFAGIDGVFRFRDDGTNQRGLAVLRVT
                     PSGGQVIAPALRTFSGSAI"
     gene            complement(2328..2483)
                     /locus_tag="VLJ17_22805"
     CDS             complement(2328..2483)
                     /locus_tag="VLJ17_22805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25843.1"
                     /translation="MFVARWHIDARFGHKQTVIDLLRKWEQEVGTKTGTDKMQGTDRF
                     DRRARGG"
     gene            complement(2576..2938)
                     /locus_tag="VLJ17_22810"
     CDS             complement(2576..2938)
                     /locus_tag="VLJ17_22810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015314125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HSV25844.1"
                     /translation="MPTKTEEVTGASIKRAIEGRDGPTLASFYADEAVLRIVDRNNPP
                     SRPREIKGRSAINAFWDDICSRAMTHKVEVSIAEGNRLAFTQACAYPDGAKVFCVAIL
                     ELKGGRISQQTVVQAWDE"
     gene            complement(3003..3494)
                     /locus_tag="VLJ17_22815"
     CDS             complement(3003..3494)
                     /locus_tag="VLJ17_22815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019862954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HSV25845.1"
                     /translation="MRKSTTLSVALMVSIAIAGIETLASAQDTSAQATYRDIEQTLGS
                     VPTFFKTFPESGIAGAWAEFKSVQLNPKTALNGKTKELIGLAVAAQIPCQYCVYFHTA
                     AARLNGASDAEIREAVAMAAIARHWSTVLNGMQVDLDGFKRETDTVLRLAAEKAKATS
                     KSQ"
     gene            complement(3700..5247)
                     /locus_tag="VLJ17_22820"
     CDS             complement(3700..5247)
                     /locus_tag="VLJ17_22820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013891389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSV25846.1"
                     /translation="MKLPETRYARSGDVRIAYQVIGNGPIDLVFVPGFLSNLEVHWED
                     PGYSHLLQRLSAFTRLIQFDKRGTGLSDRVDSRDLPNLETRMDDVRAVMDAAGSGRAA
                     LLGASEGAPMSILFAATYPARTRALVLYGGYAHFHTAVMGAEALAAFLANAERTWGTG
                     ASLAAFAPGRVEDARFKAWWARFERLSVSPAAAIALTRMNAQIDVRHALASIRVPTLV
                     IHRTADARVKFAAGRQLAQKIAGARFVEMPGRDHPIWTGEIDDVVDKIEEFLTGERPA
                     PSHDHVLATLVIARLIGAARATAFTGDRLWNERLNALRQAAADIVARHGGRPIGPGAE
                     ISARFDGTVRAVRCAMALRDVAGEFGFSLAIGVHTGEIGVRDDVVTGRTLNIAERIAT
                     QAAAREVLASAIVKDLVAGSGLHFAERGDHMIEGSDGQLRLLAVMAEQHLEPHSRTTR
                     TPGLETLSAREREVLKLVADGLSNAGIAEQLRLSDHTVKRHVANILLKLDLPSRAAAA
                     AVIGRER"
     gene            complement(5531..>6111)
                     /locus_tag="VLJ17_22825"
     CDS             complement(5531..>6111)
                     /locus_tag="VLJ17_22825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018645006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="coproporphyrinogen III oxidase"
                     /protein_id="HSV25847.1"
                     /translation="LYQLTIVPETPFAALHASGKLRLPDADLARSLYDVTQEVCAAAG
                     LPAYEISNHARPGAECRHNLVYWRCHEYVGIGPGAHGRLDIDGTRRATVTQKQPEAWL
                     GLVESQGHGLVTDELLSRAEVADEYLLMGLRLTEGIDLERFETLAGGPLASGQIAHLA
                     QHGLIETTAAGRLRVTPAGFPVLDAVVADLAA"
BASE COUNT         1120 a         1834 c         1927 g         1230 t
ORIGIN      
        1 ccttgagcga cgccgtcgag agcgtccgct tgatgatgtc gtcgaggtca attgcctcaa
       61 gatgttcgct cttggtcgga ggcccgatca cgacgacgaa ttccccccgt gtctcggcgc
      121 cgctttgata tgcgagtgcc agggcggcga catcgccgcg gcgaatctct tcgtgcagct
      181 tggtcaactc tcggcacacc gctgccgtcc gcccgttgaa tctggccgcg agatcgctga
      241 gcatagcggc gatccgtggg ccggtttcaa aaaaaatcag ggttgcgggt atattggcga
      301 gctcatcgat gcgggcgcgc cgcgcggtct cccgggacgg taggaagccc tcaaagaaaa
      361 accgatcagt cggcaagccc gaggtcgtca gagcggtcaa caccgcggag gcaccgggca
      421 cggccgtaac ggcatggcct gccgcctggg cggcctgcac cagcttgaaa cccggatcgg
      481 aaaccagggg tgtaccggcg tccgacacca gtgcaattgc ggcactggcc tctagtcgcg
      541 ctaggatctt gggccggacg gtctcggcgt tgtggtcgtg gtaacttaga agcggcgttg
      601 caatcgcgta tcgttcgagc aggcgtctcg tcacccggct atcctcgcag gcgattgcct
      661 caacgcctgc gagcgtttcc agcgcccgca gcgtcacgtc gctcagattg ccgatcgggg
      721 ttgccaccag atagagaccc gccggcagct cacgcgccgc aatgtcctca ccaaaaacac
      781 ggaaaaactt cgacttttgg gttggaaccg taaggggagt ccggaccgtc atgctggcat
      841 gttaagagat cgcgaccgat ttgtaattgc atggatgatg acgaggggct ttattgtgat
      901 ccgtcgacga tgtgcctgct ggcaggtcgg cgtattttga taccgccgcg gagatttcgt
      961 tgtatgagct tcgagggcag catgtcggag gcctacagcg tccgtgtgct ttcgttgcgg
     1021 cgtccgacgg caactgtggc gacattcgtc gcagcgataa gcctagcggc ctgcagcggc
     1081 tcgctgaatt ggaaagatgt ttcgtccagc aaaacggcgc cctccgccgc aatagcaccc
     1141 ccgccggttc ccaagctggg gtctggcgat gtcaaggttg gtctgatctt gcctttgtcg
     1201 gccagcggaa atgccggtac ggctggccag gccatgcgca atgccgccga aatggcgcta
     1261 gcggaattca acgaccccaa cgttcagttg ctgcccaaag atgataacgg caccggacaa
     1321 ggggcccaac tcgccgttca gcaggccatc gacgaaggtg cccagatcgt tttgggtccg
     1381 ttattcgcgc attcggtgac gagcgcaaag ccaattgtcc gcaatcgtgg catcccaatg
     1441 atcgcgtttt cgaccgacgc caacgtcgcc tctgccggcg tgtatctgtt gagctttttg
     1501 cccgagtccg acgtcgatcg ggtggttgcc tatgcggtct cccaaggtaa gcattcattc
     1561 gtcggcctgg tcccgagcaa tgcctatggc agcgtcgtcg aaggcgagtt caaacaagcg
     1621 gtggcgcgtc gcggtgggca gatcatggcg ctcgagcatt atgccgacga ccgtagcaag
     1681 atcggcgagg cggttcggct cgtggctcaa gccgcgggcc gcgccgatgc gttgttcatt
     1741 ccggacagcg gtgaggcggt caacaatgtg atcgcggcac tttctgatgc gggcgtcaat
     1801 ccgcgccaat tcgcgatgct gggcacgcaa ttgtgggacg atccgaagat cttctccaat
     1861 ccgctgctcg agggcggatg gtatccggcg ccagatccga ccggctttcg cgcttttgcg
     1921 gatcgctatc gtgggcgata tcggctggat ccgccgcgtc ctgcgacgct cgcctatgac
     1981 gcggtcgcgc tggttgcggc tctggtgaag acgcaaggag cgcaacgcat taccaacgaa
     2041 gtattgacca acccttcggg gtttgcggga atcgacggcg tgttccgatt ccgcgacgac
     2101 ggcaccaatc aacgcgggct tgccgttttg cgagtcacgc cgtcaggagg gcaggtcatc
     2161 gcaccggcgt tacggacctt cagcggatcg gcgatttgag tcataagacc caataaatgt
     2221 tccacactgc ggagcccgaa accacatagg gtttgaggtc ccgattggcg gtggggttgt
     2281 cgccgggcga gaactcctcc aactgcgcga tacgtttcac cgcgagatta gcctcctcgg
     2341 gcgcgccgat cgaaccggtc agtaccttgc atcttgtcgg ttccggtctt ggtgccgacc
     2401 tcctgctccc acttccgcaa aaggtcgatc acggtttgct tgtgcccgaa acgggcgtcg
     2461 atgtgccaac gtgccacgaa catgtatctc tcctgcggat tttagatgaa tgcggaatga
     2521 ccggccgtgc cggacggctc aatcggagcg gctcattcct cacagtcttg aagccttatt
     2581 cgtcccatgc ttggacgacg gtttgctgag aaatcctgcc gcccttgagc tcaagtatgg
     2641 caacgcagaa tacctttgcg ccgtccggat aggcgcaggc ctgcgtgaag gcgagacggt
     2701 ttccctcggc gatactgacc tcgaccttgt gcgtcatggc ccggctgcaa atatcatccc
     2761 agaaggcgtt gatggccgat ctgcctttga tttcgcgcgg ccggctcggc ggattgttac
     2821 gatcgacaat gcgcaaaacg gcttcgtcgg cgtagaagct cgcgagcgtg ggcccgtcgc
     2881 gcccctctat ggcgcgcttt atcgacgcgc cggtcacttc ttcagtcttg gttggcattg
     2941 tgggtctcct gtgtcggttg aatgcggtgc ctgaatcttt gaaggcgcgc ccgcgcggtt
     3001 cgttattgtg atttgcttgt tgctttcgcc ttttcggcgg ccagacgcag gaccgtatcg
     3061 gtctcccgct tgaagccgtc gagatcgacc tgcattccat taaggaccgt gctccaatgg
     3121 cgcgcgatcg ccgccatggc gacagcctcg cgaatctccg cgtcgctcgc gccgttgagc
     3181 ctggcggcgg cggtgtggaa atagacgcag tactggcaag ggatctgagc cgcgaccgcg
     3241 aggccgatca actccttggt tttgccgttg agtgctgtct tcggattgag ttggaccgat
     3301 ttgaattcgg cccatgcgcc ggcgatgcct gattcgggga acgtcttgaa gaaagtcggc
     3361 actgagccca acgtttgctc gatgtcgcga tatgtcgcct gggcggaggt gtcctgggcc
     3421 gacgccaacg tttcgatgcc agctatcgca atggaaacca tcagcgccac tgagagtgtc
     3481 gtcgatttgc gcattgtcct gctccgttcg caccctccga tttcctgcgg ccggagccgg
     3541 tgcatgaccg catcattaga ggaaaaaggc cgtccgccgc ttcgcccgta cgggccattg
     3601 ccgatatggc ctgtacgggc cagcagttca ccaggctggt ttcgcgttat ggaagcgcct
     3661 caatgcggaa aacgatgggg ttaccgatga cggacaactc tagcgttcac gaccgatcac
     3721 ggctgcggct gcggcgcgac tcggcaagtc gagcttaaga agaatgttgg cgacgtgccg
     3781 cttcacggtg tgatcgctga gccgcagttg ttcggcgatc ccggcattgc tgagaccgtc
     3841 agcgacgagc ttgagcacct cgcgttctcg cgcgctcagt gtttccaatc caggcgtccg
     3901 cgtggtgcgg ctgtgaggct caaggtgctg ctcggccatg acggcaagaa gacgcagctg
     3961 gccgtctgag ccctcgatca tgtggtcgcc acgctcggca aaatgcagtc ccgaaccggc
     4021 aacgaggtcc ttgacgattg ccgatgccag cacttcgcgg gccgcagcct gcgtcgcaat
     4081 ccgctcggca atgttgagcg tgcggccggt gaccacatcg tcgcgaaccc cgatttcgcc
     4141 agtgtgcaca ccgatggcaa ggctaaaccc gaactccccg gcaacatccc gcagcgccat
     4201 ggcgcagcgc acggcccgta ccgtaccgtc gaaccgtgcg ctgatctcgg cgccaggacc
     4261 gatcgggcgg ccgccatggc gggcgacgat gtcggcggcg gcttggcgca acgcgttaag
     4321 gcgttcgttc cacaaacggt caccggtgaa cgcggtggcg cgcgccgcgc cgatcaatcg
     4381 ggcaatcacg agcgtggcga gaacgtgatc atggctgggg gcggggcgtt cgccggtgag
     4441 aaattcttcg atcttgtcaa cgacatcgtc gatttcgccc gtccagatcg gatgatcccg
     4501 gcctggcatt tccacaaagc gtgcacccgc gatcttttgg gcgagctggc gtccggctgc
     4561 gaacttcacc cgggcgtcag cggtgcgatg gatgacgagc gtcggaaccc gaatactcgc
     4621 aagtgcatgg cgcacgtcga tctgggcatt catacgggtc agggcgatcg ccgccgccgg
     4681 gctgaccgac aggcgttcga agcgggccca ccatgctttg aaacgcgcgt cctcgacccg
     4741 accgggcgca aatgccgcga gcgaggcgcc ggttccccaa gtccgctcgg cattggcgag
     4801 gaacgccgcc aatgcctccg ctcccataac ggctgtatgg aaatgggcgt aaccgccata
     4861 gagcaccagc gctcgggtcc gtgccggata ggttgcggca aacaaaatcg acatcggggc
     4921 accctcggag gcgccgagca gtgccgcacg gccgctcccg gccgcatcca tgacggcgcg
     4981 aacgtcgtcc atccgggttt cgaggtttgg cagatcgcga ctgtcgacgc gatcgctgag
     5041 accagtgccg cgcttgtcga actggatgag ccgtgtgaag gcgctgagcc gctggagcag
     5101 atggctgtaa ccggggtctt cccagtgaac ttcgagattg gacagaaatc cgggcacgaa
     5161 cacgagatca atcgggccgt tgccgatcac ctgataggcg atccgcacat cgccgcttcg
     5221 ggcgtaccgg gtttcgggca atttcattaa atgcgagtcg aatttacgtc ggcgccaccc
     5281 tatcgcatgg ttatttggtc gcccgacagc gtcacatcgt cgcccgccga tatcgtcgga
     5341 gtgcggggcc gggctaatta accgatcagc aacgaatcga tccgcggatg tcgcccagct
     5401 cgattcgttc tccgtgaacg gatagggacg caaagcgtcg gtgatgggta tttatttggt
     5461 accgacgacg tccatggcca tttcaaactt tcttcattgc ctggcgattc gaggccgaat
     5521 cgacatcgct tcacgccgca agatcggcca cgacagcgtc gagcaccgga aatcccgctg
     5581 gtgtcacgcg caaacgtccg gcggctgttg tttcgataag gccgtgctgc gcaagatggg
     5641 cgatctgtcc ggatgcgagc gggccgcctg ccagtgtttc aaaacgctcc agatctattc
     5701 cttcggtgag gcgcaggccc atcaagaggt actcgtccgc cacttcggca cgcgacagca
     5761 actcatcggt cacaaggcca tggccttgag attcgaccag cccgagccaa gcctccggtt
     5821 gtttttgggt caccgtcgcg cgacgagtcc cgtcgatatc gaggcggcca tgggcaccgg
     5881 ggccgatgcc gacatattcg tgacagcgcc agtacacgag attgtgccgg cattcggcgc
     5941 cgggtcgggc gtgattggag atttcataag ccggtaagcc cgcagcggcg caaacctcct
     6001 gagtgacgtc atagaggctg cgggcgagat cggcatccgg caggcgtaac ttaccggacg
     6061 cgtgcagcgc ggcgaacggc gtttccggta cgatggtgag ctggtagagc g
//
LOCUS       DATILV010000948         8685 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4838777, whole genome shotgun sequence.
ACCESSION   DATILV010000948 DATILV010000000
VERSION     DATILV010000948.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8685
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4838777"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..790)
                     /locus_tag="VLJ17_22830"
     CDS             complement(<1..790)
                     /locus_tag="VLJ17_22830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25848.1"
                     /translation="MRTRLVTSIGASLVFVSAPAFLQPTEVAAADQASTASVKAPAVA
                     AALKTPWGEPDLQGIWTDETDTPLQRSPKYAEQEFFTEVQRQELDQERSVLLGRDRRV
                     ERGTELDVAGAYNAVFMSIKHTGARTSMIIDPPNGRIPPLMPEAEKIAAADREFRLAL
                     LQSTETCKTKSVACSGGKYDPIPSPRRTELPPRYNTARMNRHDGPEEGTLAERCLTGG
                     LPGIGGNSFRRIVQTPGGITMFYDVGQGQGWQRNIVMDGSPHLPA"
     gene            complement(1065..1745)
                     /locus_tag="VLJ17_22835"
     CDS             complement(1065..1745)
                     /locus_tag="VLJ17_22835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25849.1"
                     /translation="MELAQAYTPDAAFEKMQKLFAEAVAEKDTQALFALVGPTFVRMS
                     QGEFSDQFDFGRDALHNFKVVFGFREHGKDSDGAVANGPFWDSLAHFAANKTFYKAAD
                     TLVCGPTAAVIVDGGAFERAKQKIGADDSVEWYFTVVETPATSTPGVTGPQVGRISGI
                     AVPVLNVHPAQEGQSAPPASHLKVLLPTGKSGWISLSAAHPLATHRLCYALTSGREWK
                     ISAFDQAQ"
     gene            complement(1867..2034)
                     /locus_tag="VLJ17_22840"
     CDS             complement(1867..2034)
                     /locus_tag="VLJ17_22840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25850.1"
                     /translation="MLRVPGLWWLVPLFYILMVSRLFGHPIYKLGRANRGGLSPHVRG
                     IWPGARTRSKF"
     gene            2262..3098
                     /locus_tag="VLJ17_22845"
     CDS             2262..3098
                     /locus_tag="VLJ17_22845"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acyl homoserine lactonase family protein"
                     /protein_id="HSV25851.1"
                     /translation="MSRTSLTVVAIITLLAALMLGLCPDFAQQPQPGKSGIERLYVLY
                     CGDIALNDASSFTPGASGPGALTVSCYLIKHQQGWLLWDTGIPDAIASMPNGQKSAAG
                     NWTSRKTLMSQIVELGLKASDITYLALSHSHGDHVGNVDAFAQSTLVVQKAEYDWPLP
                     DGKPRFNPAQKVVKAEGDRDIFGDGSVVLISTPGHSPGHQCLLVRLPKSGALLLSGDA
                     VHTRANWDSRRAPERNFNVPQSLASLDRMAAVIKENNGQLWIGHETSDVPLRKYAPDY
                     YE"
     gene            complement(3105..3719)
                     /locus_tag="VLJ17_22850"
     CDS             complement(3105..3719)
                     /locus_tag="VLJ17_22850"
                     /inference="COORDINATES: protein motif:HMM:NF023696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3617 family protein"
                     /protein_id="HSV25852.1"
                     /translation="MAEMIAARSAPPPRRWPSWAAHDRIAKDLPSVEEKVPVAQHMLR
                     RVHLQNWTFRSHGRFHTASLIRAAGLAVCCLTVSHAAADGIAPGEWKLTETIIMNGNK
                     GAPQTRMRCLSPEQAGDTAATFSPEYRTVNSGCERVEFNSTATALRWRMKCTGQMDMD
                     VSGDFTFDTPKHYTATITSRGAMAGREFVNTSVAIEGEHIGECR"
     gene            3772..4587
                     /locus_tag="VLJ17_22855"
     CDS             3772..4587
                     /locus_tag="VLJ17_22855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018260290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HSV25853.1"
                     /translation="MTTFNRRTLLQGCAALAVCGTGFLRTSRTWAQATANPLPEVKAL
                     LFDVFGTLVDWRNGVAREAERTLKPLGHSLDWLAFADAWRAEYQPGMDEIRTGRQPFV
                     KLDIIHRRMLDKIKPRFGLEKLDEATQVELNFAWHQLDTWKDVGPAFARLRTRLMLCP
                     CSNGNIAIMADIGRRNDLRWHAILGSEIAGDFKPKPRVYLASAEALNLKPAECMMVAA
                     HSGDLTAAAAQGLRTGHVGRPGEGGPGTGETTPKGTFDVVAKDFEEFATKMAT"
     gene            complement(4719..5606)
                     /locus_tag="VLJ17_22860"
     CDS             complement(4719..5606)
                     /locus_tag="VLJ17_22860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010684184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV25854.1"
                     /translation="MSVIPTCAAPREPTRPSFPPPPDACDTHAHVFGPAAQFPYAADR
                     SYTPPEAPMAKYLAMLDTVGFRRGVLVQGSAHGRDNAAMFNALAHNPDRLRGVAVADA
                     TVTPRELRRWHEIGVRGLRFNHFFRGGSLHYRGGVPLEAATALAGIMAELGWHLQLWI
                     DVKDLPDTIPTLKQIGLPVVVDHMGRTDARSGTATPGFQSLLRLLGDGECWVKVSGAH
                     RLSERAPDYDDARPFHEALVRANPERLVWGSDWPHPRLEGEMPDAGHLFELFHAWTPD
                     EVVRQCILVANPAKLYGFL"
     gene            complement(5603..6583)
                     /locus_tag="VLJ17_22865"
     CDS             complement(5603..6583)
                     /locus_tag="VLJ17_22865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV25855.1"
                     /translation="MAASIGRCAAIAFAALACATLSPTAHAQDFPSKPVHLLVPFPPG
                     GAVDIMARTLADELGKRWPANIIIDNRPGAGGTIAADAAAKAPPDGYTLVIVASGHAI
                     VPFLYPRLPYDVFADFTPITLLGNSPNLALVRADSPIKTLAELIEAARAKPGQLSYGH
                     AGNGTSPHLAGELLKVTAKIDITAVPYKGGAPALNDLLGGHIPLTFNNVPESIAQIRS
                     GALRPLAVTTAKRTPILPDVPTFDESGVKGYDTGVWWALLAPAGLPADVKTKIYRDAA
                     DAMKSTAVKERVQTLGAVPIGSTPEELVALIRADYEKWGPIIKAAGVVAE"
     gene            7187..7351
                     /locus_tag="VLJ17_22870"
     CDS             7187..7351
                     /locus_tag="VLJ17_22870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25856.1"
                     /translation="MSNHNDESEMRVMWIASAVIVLLILGAMGINMLVHHETSAATPE
                     TSQSPAEPPK"
     gene            7476..7613
                     /locus_tag="VLJ17_22875"
     CDS             7476..7613
                     /locus_tag="VLJ17_22875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25857.1"
                     /translation="MTPWTATLTYVPGPDQIPEGVCAENPREYYNNKDSDIPKAEKPD
                     F"
     gene            7821..>8685
                     /locus_tag="VLJ17_22880"
     CDS             7821..>8685
                     /locus_tag="VLJ17_22880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013216288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009267 - cellular response to starvation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation CstA family protein"
                     /protein_id="HSV25858.1"
                     /translation="MPWRTKLLWTMVAALGAVSFGITALNRGEAVNAAWLVIAAVCIY
                     FLAYRFYGLFVANRALGVDGARPTPAYRHNDGLDYVPTNRYVLYGHHFAAIAGAGPLV
                     GPVLAAQMGYLPGTLWILAGAVFAGAVQDMTVLFLSTRRDGRSLGDIARAEMGPIAGT
                     IAGVGILLICVIVLAVLALVVVKALIGSPWGTFAVFCSIPIALLMGVYSRFIRPGRVG
                     EMSLLGCVLLLGALIYGKTVSETPALAVYFDLTGETLALIIIGYGFVASVLPVWLLLA
                     PRDYLSTFLKIG"
BASE COUNT         1620 a         2693 c         2716 g         1656 t
ORIGIN      
        1 cggccggcag gtgtgggctc ccgtccatga caatgttccg ctgccagcct tggccctgac
       61 ccacgtcgta gaacatcgta atgccgcctg gcgtctgcac gattcggcgg aagctgttgc
      121 ctccgatccc gggcagtccg ccggtcaggc agcgttccgc caacgtgccc tcctccggac
      181 cgtcatggcg attcatgcgc gcggtgttgt aacgaggagg aagctccgtc cgtcgcggcg
      241 agggtatcgg atcatacttg cctccggagc acgccaccga cttggtcttg cacgtttcgg
      301 tcgattgcaa cagggcgaga cgaaattcgc gatcggcggc cgcaatcttc tcagcctccg
      361 gcatcagcgg cggaatccga ccgttgggcg gatcgatgat catcgacgta cgcgcgccgg
      421 tgtgcttgat ggacatgaac accgcgttgt aggcgccggc gacgtcgagc tcggtcccgc
      481 gttccaccct cctgtcgcgg ccaagcagca ctgatcgctc ttggtccaat tcttgacgct
      541 gcacctcagt gaaaaattct tgctccgcat acttggggga gcgctgcagg ggcgtatcag
      601 tttcgtccgt ccaaattccc tgtaggtccg gctcgcccca aggtgttttc agcgccgcgg
      661 ccaccgccgg agccttcacg gaagcggtgg aagcctgatc cgccgctgcc acttccgtcg
      721 gttgcaaaaa tgcgggcgcc gatacaaaca ctagcgatgc tccgatcgac gtcacaagtc
      781 gagtgcgcat ctcgtgcctc cttctgccca acgccagaca gaggacatgt gcccgacaac
      841 tggcgaggac ggcaaccgcc aagtggcatc ttatcatcaa ggaccgggct actgtccagc
      901 gggttgcgac gtgctttggg gcgcgtcccg atgaagtgtt ccacctcttg tcctcccctc
      961 gcgggttcat ctccttcaca tgacggtgga ttgacagggc aagcttggca atgtcgttgt
     1021 ctgaatgtca gccgggcgtg ctcaagttgg cgcagccccc ccgactattg ggcctgatcg
     1081 aacgcggaga tcttccattc tctaccagaa gtgagggcgt agcaaagccg gtgcgtcgcc
     1141 agcggatgag cggcggatag cgagatccaa ccgctttttc ctgtcggcag cagcaccttc
     1201 aaatgtgaag cgggcggcgc cgactgaccc tcctgcgccg gatgcacatt caagaccggc
     1261 accgcgatcc cgctaatgcg tccgacctgc ggaccagtga cgccaggcgt agacgtcgca
     1321 ggggtttcca cgaccgtaaa ataccactcg accgaatcgt ccgcgccgat tttctgtttc
     1381 gcccgctcaa aagcacctcc gtccacgatc actgcggctg taggcccgca caccagcgtg
     1441 tcggcagcct tgtaaaaggt tttgttggcg gcgaagtgcg ccagactatc ccagaagggg
     1501 ccattggcta ccgcgccatc ggagtctttt ccgtgctccc tgaagccgaa gaccaccttg
     1561 aaattatgca acgcgtcgcg cccgaagtcg aactgatcgc taaactcgcc ctgcgacatg
     1621 cgcacgaaag tcggccccac cagggcgaac aaagcttgtg tgtccttttc ggcgaccgcc
     1681 tctgcgaaca atttttgcat cttttcgaag gcggcgtcgg gtgtgtaggc ctgtgccaat
     1741 tccaccttga cggccggata aggtatttct ttcatcgcag cttgggattt ggcattggct
     1801 gcaaatatga aagccgctgc agtgatccag acgagtaaac tgcgcatgcc aacctgccat
     1861 cagttttcaa aacttcgatc gggtgcgtgc gccgggccaa attccccgca cgtgtggcga
     1921 cagcccgccg cggttggcgc gacccagttt atagatcgga tggccgaaca ggcggctgac
     1981 catcagtata tagaataacg gcaccagcca ccacaggcca ggcacgcgca gcacgaatgg
     2041 ctcacctaag gccgacgggc cggtaacgca ccgagtgatg ttgccggaaa ctatgcccgg
     2101 ctggccgtca tgtgcgttaa gttaggctcc gcccgagccg ccgcttctcc gtcccgcatg
     2161 tcgacgaggg gggagaggct gtggcactgc ggtgccaaac tgcacgatcc cgtccccgaa
     2221 gataaggagg gatacggaaa ggctcacaag gagaaacgcc aatgtcaaga acgtcgctga
     2281 ccgtcgtcgc gatcatcacg ttgctcgccg cactgatgtt gggattgtgc ccggactttg
     2341 cacaacaacc acagccgggc aaatccggta ttgagcggct ctatgtgctc tattgcggcg
     2401 acatcgcgct taacgatgca tcgagcttca cgccgggcgc cagcggtcct ggtgcgctca
     2461 cggtgtcgtg ctatctcatt aagcatcagc agggttggtt gctgtgggac accggcatcc
     2521 cggatgcgat cgcatccatg ccgaacggcc agaagagcgc tgccggcaac tggacgagcc
     2581 gcaaaacgct tatgagccag attgtggaac tcggcctcaa agcgtcggac atcacgtatc
     2641 tggcgctgtc gcattcccac ggcgaccacg tcggcaatgt ggacgccttc gcgcaatcga
     2701 cacttgtggt gcagaaggcc gaatacgact ggccgctacc ggacggcaag ccgcgcttca
     2761 atccggccca gaaggtcgtt aaggccgaag gcgaccgcga catcttcggc gacggcagtg
     2821 tcgtgctgat ctcgacaccg ggccactcac ccggccatca gtgcttgctg gtgcgcctgc
     2881 ctaagtccgg cgctctgctg ctttccggcg acgcggtgca tacccgcgcc aattgggata
     2941 gccgtcgcgc accggagcgg aacttcaacg tgccgcagtc ccttgcctca ctcgaccgca
     3001 tggccgccgt catcaaagag aacaacgggc aactctggat cggccatgaa accagcgacg
     3061 tgccgctgcg caaatatgcg ccggattatt acgaataaag gcgcttaccg gcattcgccg
     3121 atgtgctcgc cctcgatggc gacgctggtg ttgacgaact cccggcccgc catggcgcct
     3181 ctggaggtga tggtcgcggt ataatgctta ggcgtatcga aagtgaagtc gccggacacg
     3241 tccatgtcca tttgtccggt gcatttcatg cgccatcgca gcgccgtcgc ggtcgaattg
     3301 aattcgacgc gctcgcagcc ggaattcacg gtgcggtatt ctggcgagaa ggtcgcggcc
     3361 gtgtcgccgg cctgctcggg cgaaaggcag cgcatcctgg tctgaggcgc tcccttgttc
     3421 ccgttcatga ttatggtctc ggtgagcttc cattcgccgg gtgcgatacc gtcggcggct
     3481 gcatggctca ccgtcaggca acaaaccgcg agcccagcgg ccctgatcaa cgatgcagta
     3541 tggaagcgac cgtgagatcg aaatgtccaa ttttgcagat gaacgcgacg caacatgtgc
     3601 tgtgccaccg gaactttttc ttcgacgctc ggcaagtctt tggcaattct atcgtgcgca
     3661 gcccatgaag gccagcgccg cggtggtggg gcgctccggg ccgcaatcat ttccgccatg
     3721 tgatatgttc ccgtcacaca gaatccggcc aaaaaaccac gggaggttgc gatgacaaca
     3781 ttcaatcggc gcacattgct gcaggggtgc gccgcgctcg cggtttgcgg tacgggattt
     3841 ctgagaactt cgcgaacatg ggcgcaagcg accgcaaacc cgctgcccga agtcaaggca
     3901 ttgctcttcg acgtgttcgg caccttggtg gattggcgca acggtgtcgc ccgcgaagcg
     3961 gaaagaaccc tcaagccgct aggtcattcg ctcgactggc tcgccttcgc ggatgcgtgg
     4021 cgcgccgaat atcagcccgg catggacgag atccgtaccg gccggcagcc attcgtcaag
     4081 ctcgacatca ttcaccggcg catgctcgac aagatcaagc cgcgctttgg gctcgaaaag
     4141 ctcgacgaag cgacgcaggt ggagctcaat ttcgcctggc atcaactcga cacctggaag
     4201 gatgtagggc cggcatttgc tcggctgcga acccgcctga tgctgtgccc gtgctccaac
     4261 ggcaacatcg ccattatggc cgatatcgga cgccgcaacg atttgcgctg gcacgcgatc
     4321 ttgggctcgg agattgccgg cgacttcaag ccgaagccgc gcgtctatct ggcctccgcc
     4381 gaggcgctca atctcaagcc cgccgaatgc atgatggtgg cggcccacag tggcgatctc
     4441 accgctgccg cggcgcaggg cctgcggacc ggccatgtgg gacgcccggg cgaaggcggt
     4501 cccggcaccg gcgagacgac gccgaaaggc acgttcgatg tcgtggcgaa ggatttcgag
     4561 gagtttgcta cgaagatggc gacgtgaagc gggaggcaag ggcggccatc gtgcgctgcc
     4621 gttgcccacc cgatcgagac gcgcggaccg gcgtcaaacg gcacggccga acacagcgcg
     4681 cggcaaaacc aacccgcgtt cgcccgcttt tgcccatcct acaaaaatcc gtaaagcttc
     4741 gccggattgg cgaccaggat gcactggcgc acaacctcgt ccggcgtcca cgcgtggaac
     4801 aactcgaaca gatgcccggc atcgggcatt tcgccttcca ggcgcggatg cggccagtcg
     4861 ctgccccaca ccagccgctc cgggttggcg cgcaccagcg cctcatggaa cggacgggcg
     4921 tcgtcatagt caggcgcgcg ttcgctgagg cggtgggcgc ccgacacctt gacccagcat
     4981 tcgccgtcgc caagcaggcg cagcagggat tggaatccgg gcgttgccgt tccggagcgc
     5041 gcgtcggtgc ggcccatatg gtcgaccacc accggcagcc cgatttgctt gagcgtcggg
     5101 atagtgtcgg gcaggtcctt gacgtcgatc caaagctgaa ggtgccagcc gagttccgcc
     5161 attatgccgg ccagcgccgt tgcggcttcg agcggcacgc cgccgcggta atgcagcgaa
     5221 ccgccacgga agaagtggtt gaaccgcaag ccgcgtaccc cgatctcgtg ccagcgccgc
     5281 agttcccggg gcgtcaccgt ggcgtcggcc accgcaacgc cgcgcagccg gtcgggattg
     5341 tgcgcgagcg cattgaacat cgcggcgttg tcgcgcccat gggcgctgcc ttgcaccagc
     5401 acgccgcgtc tgaagccgac cgtgtcgagc atggcgagat atttcgccat cggtgcctcc
     5461 ggtggcgtgt agctgcgatc cgccgcgtaa gggaactgcg ccgccggccc gaatacatgg
     5521 gcatgggtgt cgcaggcgtc aggcggcggc ggaaagctcg gccgcgtcgg ctcgcggggt
     5581 gcggcgcatg tagggatcac gctcactcgg ccacaacgcc ggcggccttg atgatcggtc
     5641 cccacttctc gtagtcggcg cggatgaggg ccacgagctc ttcgggcgtt gagccgatcg
     5701 gcacggcacc cagcgtctgg acacgctcct tgacagccgt cgatttcatg gcgtcggccg
     5761 catcgcgata gatcttcgtc tttacgtccg ccggcaggcc ggccggagcg agcagcgccc
     5821 accacacgcc ggtgtcgtag cccttgacgc cggactcatc gaaggtcggc acatcaggca
     5881 agatcggggt gcgcttcgcc gtggtcacgg cgagcggccg cagcgcgccg gaccggattt
     5941 gcgcgatcga ctctggcaca ttgttgaagg tgagcggaat gtggccgccc aagagatcgt
     6001 tgagcgccgg cgcgccaccc ttgtagggga ctgcggtgat gtcgattttg gcggtcacct
     6061 tcaagagttc gccggcaaga tgcggcgagg taccgttgcc ggcgtggccg tagctgagct
     6121 ggccgggctt ggcacgcgcc gcctcaatca gctctgcgag cgtcttgatc ggcgaatcgg
     6181 cgcgcaccag cgcgaggttc ggcgaattgc cgagcagcgt gattggggtg aaatccgcga
     6241 acacatcata aggtaacctg ggatagagga acggcacgat ggcgtgaccg cttgccacga
     6301 tgacgagcgt gtagccgtcg ggcggcgctt tggcggccgc atccgccgcg atcgtgccgc
     6361 cggcgcccgg acggttgtcg atgatgatat tcgccggcca gcgcttgccg agttcatccg
     6421 caagtgtgcg cgccatgata tcgaccgcgc cgcccggcgg gaacggcacc agcagatgca
     6481 ccggcttcga ggggaagtcc tgcgcgtgtg ccgtagggct gagcgtcgcg cacgcgagag
     6541 ccgcaaacgc gattgcggcg caacgcccga tcgaagctgc catcgacgtc ctcctcttgt
     6601 taaagcacat gtcggtgcat tgaaggccgg gcacgttcac atgcgcaagc aaatccggct
     6661 ggccgcgctt tgcgacaaat ggcagcgcgg gagcaccgct tgtgtgccgc cgaccttccg
     6721 ccgttctcca aatccacgat tgaatccggt gttcttgttg ccttctacaa cacccaagcg
     6781 agcgaacgcg cttaaggagt aaccgtcctg gcaagccgga aacccacgta atggacgcgg
     6841 tcggtcgggt cgacccagat gcggacggcc gcacgcaggt tgtttgggag gctctaccag
     6901 aaccaccgcc gagaggccgg agagggcaaa cgggtcctga tccccctatt acgatcgcca
     6961 gccgccgaaa tcgagccgcc ggtgtccaag ccgaaccgtc ggacggtgcg cccgcatagc
     7021 cgtcatgata gcagtccacg gtccactgtg aatcgttgcc gagcacgtcg tgcaagccga
     7081 atgaattcca gcggctgtca cgctcgcgtg atcacccgta tttatgacag ttcaccggcg
     7141 gcgcccatcc ggcaattatg tcgcaccaaa gacaagggtg cgtgtaatgt cgaaccacaa
     7201 tgacgagagt gaaatgcgcg tgatgtggat tgccagcgcc gtgattgtgc ttttaatcct
     7261 tggtgctatg ggtatcaaca tgctcgtcca ccacgagaca agcgccgcga cgccggaaac
     7321 gagtcagtca cctgcggaac cgccgaaata gcggaatacg cctgcacgct gcgagcgcgg
     7381 ctcgctgtgc tcgcccgggc ggctcggaag aaggatgtgc cccccgaaag tgcgccaacc
     7441 ggatggggac gggcggtgct catgaagggg aggcgatgac gccctggacc gcgaccctga
     7501 cgtacgtgcc ggggcctgac caaataccgg aaggggtctg tgctgaaaat ccgcgcgagt
     7561 actacaacaa caaggactcg gatatcccga aagccgagaa gcccgacttc tgaagggtga
     7621 cgcaccgcgg ttgtgctaaa cttaagggct gcccctcaag agacattagc gttggggcac
     7681 gagttctggc atcccggcac ctttttaggc gttccggccc ggccaggatt gcgatgtagt
     7741 aagatgtccg aaagcgagcc atttgatgag actctgctgt agtaggggag gaaatcgtgg
     7801 gccccacctt caagaacata atgccgtggc ggacgaaact cttatggacg atggtcgcgg
     7861 cactgggagc tgtttctttc gggattacgg cgctcaatcg gggcgaggcg gttaatgccg
     7921 cgtggctcgt catcgccgca gtttgcattt attttctggc ctatcggttc tatgggctgt
     7981 ttgtcgcaaa ccgggcgctc ggcgtcgatg gcgcgcggcc gacgccggcc tatcgccata
     8041 acgacggcct cgattacgtc ccgaccaatc gatatgtgct ctacggccac catttcgcgg
     8101 cgattgcagg cgccggtcca ctggttggtc cagtgcttgc cgcgcaaatg gggtatttgc
     8161 cgggtacgct gtggattctc gccggagcgg tctttgctgg tgcggtccag gacatgacgg
     8221 tcctgtttct gtcgacccgc cgcgatggtc gttcgttggg cgacatcgct cgtgccgaga
     8281 tgggaccgat cgcgggtacg attgccgggg tcggcattct cctgatctgc gtcattgttc
     8341 ttgcggttct tgctctcgtc gtcgtcaagg cgctgatcgg cagtccgtgg ggaactttcg
     8401 cggtgttctg ctcgattcca atcgcgcttc taatgggtgt ctatagccgg tttatccgcc
     8461 cgggcagggt cggcgaaatg tcgctactcg gctgcgtatt gcttctcgga gcgctgatct
     8521 atggcaagac cgtgtccgag acgcctgcgc tcgccgtcta tttcgatcta acaggggaga
     8581 cactggcgct gatcatcatc ggatacggct ttgtcgcatc cgtgctgccg gtctggttgc
     8641 ttctggctcc gcgcgattac ctttcgacat tcctcaaaat cggca
//
LOCUS       DATILV010000949         4181 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2277469, whole genome shotgun sequence.
ACCESSION   DATILV010000949 DATILV010000000
VERSION     DATILV010000949.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4181
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2277469"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..494)
                     /locus_tag="VLJ17_22885"
     CDS             complement(<1..494)
                     /locus_tag="VLJ17_22885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010913336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSV25859.1"
                     /translation="MANRRKPLVVVTRRLPEKVETRMCELFDTRLHVNDRPMSHTDLV
                     EAVKTADILVPTVTDRVDSALLSQSGEQLRLIANFGNGVDHIDLATAIQRGITVTNTP
                     GVLTEDTADMTVALILAVPRRLAEGAAVMTGEKEWHGWAPTWMLGHRIGGKRLGIIGM
                     GRIG"
     gene            862..1338
                     /locus_tag="VLJ17_22890"
     CDS             862..1338
                     /locus_tag="VLJ17_22890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016844714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HSV25860.1"
                     /translation="MPVIRSARAANDQNEGSGLPLPRFVSLKSDHVNVRGGPNKDHDV
                     AWVYTRPALPVEITAEYENWRRIRDRDGAEGWVYHSLLSGRRTAYVAKPKTQIDFVPL
                     YESPDRVSPLRAMLEPGVLGNIKRCNGQWCRFAGNGFDGWVEQDRLWGVYPNEKIE"
     gene            complement(1395..1892)
                     /locus_tag="VLJ17_22895"
     CDS             complement(1395..1892)
                     /locus_tag="VLJ17_22895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011155992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HSV25861.1"
                     /translation="MEFRRQITFHQEPTGAAPARDSAADSRNGCPWHDVRALLREVGL
                     RPTRQRMALGWLLFAKGDRHLTAEMLYEEANRAKIAVSLATVYNTLHQFTDAGLLREV
                     TVNGSKTYFDTNVSDHHHFFIENEHNLVDIPDANSIVGELPQVPEGYEISRVDVVVRL
                     RPKKR"
     gene            2140..2667
                     /gene="fabA"
                     /locus_tag="VLJ17_22900"
     CDS             2140..2667
                     /gene="fabA"
                     /locus_tag="VLJ17_22900"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019171 -
                     (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     FabA"
                     /protein_id="HSV25862.1"
                     /translation="MQKRSSFEFEDLLACGRGEMFAGGPQLPLPPMLMFERISEISEQ
                     GGEHGRGLARAELDVKPDLWFFPCHFKGDPVMPGCLGLDALWQLVGFFLGWTGAEGKG
                     RALGLGEVKLSGTVVPTVKKLVYGIDIKRIMRSRLVLGIADGWVSADGSIIFRAFDLK
                     VGLFRDVGALVPAAT"
     gene            2758..3975
                     /gene="fabB"
                     /locus_tag="VLJ17_22905"
     CDS             2758..3975
                     /gene="fabB"
                     /locus_tag="VLJ17_22905"
                     /EC_number="2.3.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase I"
                     /protein_id="HSV25863.1"
                     /translation="MRRVVVTGMGIVSSIGNNTQEVLASLREGKSGISRADKYAELGF
                     RCQVHGAPTLDPQESVDRRAMRFLGTGAAWNHVAMEQAMRDAGLQENEISNERTGIIM
                     GSGGPSTRTLVEAADTTRTKGPKRVGPFAVPKVMSSTASATLATWFKIKGVNYSISSA
                     CATSNHCVGNAAEIIQIGKQDTIFAGGCEDLDWTMSVLFDAMGAMSSKFNDTPEKASR
                     AYDVARDGFVIAGGAGVLVLEELEHARARGAKIYAEVAGYGATSDGYDMVAPSGEGAV
                     RCMRMALSTVKAPVDYVNPHATATPIGDVKEIEALREVFGAKCPPISATKSLSGHSLG
                     AAGVHEAIYSLLMMNNGFICESANIENLDPEFADMPIVRERRDNVALGCVLSNSFGFG
                     GTNASIVLKRLDV"
BASE COUNT          814 a         1205 c         1295 g          867 t
ORIGIN      
        1 tggccgatcc gtcccatgcc gatgatgccg aggcgcttgc cgccgatccg atggccgagc
       61 atccacgtcg gcgcccagcc atgccactcc ttctccccgg tcatcacggc agcaccttcg
      121 gccagacggc gcgggaccgc cagaatgagc gctaccgtca tgtcggcggt gtcttccgtg
      181 agaacgccag gtgtatttgt gaccgtgatg ccacgctgga tggcggtcgc aaggtcgata
      241 tggtcgacgc cgttgccgaa attggcgatc aaccgtaatt gctcgccgga ttggctcagt
      301 aaggcggagt cgacgcggtc cgtcactgtc ggcaccagga tatcagccgt tttcacggcc
      361 tcgaccaaat cggtgtggct catcggacgg tcattgacgt gaaggcgggt gtcgaacagc
      421 tcgcacatcc gcgtctcgac cttttcgggg agcctgcgag tgacaacgac gagcggtttt
      481 cggcgattcg ccatccgtca accctttgtg agccctcatg gtcgttggcg gtcccgggtg
      541 ccggatccgc cgggtcgacg tgcgccttgt ttagtcctcc ttaaccctca tcgccgacac
      601 tgccgccatc gcgacaagcg tgggtgtggg tggcgcgatt cgatccttct ctatcagatg
      661 gccggatcaa cacaaagcat tcgtagcaaa ggttcgaagc gaggtttgca aaaaatcttg
      721 catacgccgc agacgtccat ggggcgcctc tccggtcaag tgcaaaatcc agggaaattt
      781 cgacgaacca tgttcgcagg tttgttgcgc cgcctcatgc gtccactgat ggtagggtcc
      841 gtggcggctg ccgttgcggc aatgccagtc attcgatcag ctcgggcagc caatgaccaa
      901 aacgaaggca gcggcctccc gctgccgcgg ttcgtcagcc tcaaatccga ccacgtcaat
      961 gtacgcggcg gccccaacaa agaccatgat gtggcctggg tgtacactcg tcccgcgcta
     1021 ccggtagaaa ttacggccga atacgaaaat tggcgacgaa ttcgcgatcg cgacggtgcg
     1081 gagggctggg tgtaccattc tctcttgtcc ggcaggcgca ccgcctacgt ggcgaagccc
     1141 aaaacccaga tagatttcgt gccgctatac gaatccccgg accgcgtgag ccccctgcgc
     1201 gccatgctcg agcccggggt gctcggcaat atcaagcgct gcaacggtca atggtgccgg
     1261 ttcgcgggca acggatttga cggatgggtc gaacaagacc gcctttgggg cgtttatccg
     1321 aacgagaaga tcgaatgaga taagcaactc gcagctgccg aaccgctaac gctcacacgc
     1381 aagggcggtt tcaatcagcg ctttttaggc ctcagtctta ctaccacgtc gacacggctg
     1441 atttcataac cctccggcac ctgcggcaat tcgccgacaa tggaattggc atccggaata
     1501 tcaacgagat tgtgttcgtt ttcgatgaag aagtggtggt ggtccgaaac attggtgtca
     1561 aaataagttt tcgacccgtt gactgtcact tctcgcagta gtccggcatc ggtgaattgg
     1621 tgaagggtat tgtaaaccgt agccaatgaa acggcgatct tggcacggtt agcctcttca
     1681 taaagcattt ccgcggtgag gtgccggtcg cccttcgcaa ataagagcca gcccagcgcc
     1741 atgcgctgac gggtcggacg cagcccgacc tcgcgcagaa gcgcccggac atcgtgccac
     1801 ggacacccat tgcggctatc ggctgcggag tcacgcgccg gcgcggcgcc cgtcggctcc
     1861 tgatggaaag tgatctggcg acgaaactcc atggctcaca tcgtgcgctc gagagagcgc
     1921 gttcaaacag gatcgtttca tttgcaatta tatccttcgc cgggacttgt tgcaagcgct
     1981 tcgcaacaaa ccacatcctg acgggccccg atctcctgtc ccctggacaa ctcgtctcgg
     2041 gatgacgagg cgcgcgctgc tttgcccgat ccgcgggcgt gtgttaggga ataaacccgt
     2101 gtgagactgc ccccaccttg cggcgaggac caagtcggaa tgcaaaaacg ttcaagcttt
     2161 gaatttgaag acttgctcgc ctgcggtcgc ggtgaaatgt ttgctggggg gccacaattg
     2221 ccgttaccgc cgatgctgat gtttgagcga atcagcgaaa tttcggagca aggcggcgaa
     2281 catgggcgag ggctcgcccg cgcggaactc gacgtaaagc cggacctctg gtttttcccc
     2341 tgtcatttca agggggatcc tgtcatgccg ggttgtttgg ggctggacgc attgtggcag
     2401 cttgtcgggt ttttcctcgg ctggaccggc gcagagggta agggacgtgc acttgggctt
     2461 ggcgaagtca agctttccgg aacagttgtc ccgaccgtca aaaagttagt gtatggcatc
     2521 gatatcaagc ggatcatgcg ctccagactt gtactcggta ttgcggacgg gtgggtgtcg
     2581 gcagatggat cgattatctt ccgtgcattc gatctcaagg tcggattatt ccgcgacgtt
     2641 ggggcattgg tgcctgcagc gacttgatca gggtcatttg cgggtcgtgg ttggaggtgt
     2701 tgttcgccag tcttgttcgc gggtcttgag cgactccgag aggcgggaag gaagatcatg
     2761 aggcgggtcg tcgtcaccgg catgggcatt gtctcgtcca tcggcaacaa cacgcaagaa
     2821 gtgctggcga gcttgcggga agggaagtcc ggcatatcgc gggcggacaa gtacgccgaa
     2881 ctcggatttc gctgccaggt ccacggcgct ccgacgctcg atccccagga atcggtcgat
     2941 cggcgagcga tgcgttttct cgggactggt gcggcctgga accacgtcgc catggagcag
     3001 gcgatgcgcg atgccggcct gcaggaaaac gagatttcca acgaacgcac cggcattatc
     3061 atgggctccg gcggcccttc gacccgcact ctggtcgagg ccgccgacac cacccgtacc
     3121 aaaggtccaa aacgtgtcgg cccgttcgcg gtgccgaagg tgatgtcatc gaccgcctct
     3181 gcgacgctcg ccacgtggtt caaaatcaaa ggcgtgaact attcgatatc ttcggcctgc
     3241 gcgacctcca atcattgcgt aggcaatgcg gccgagatca tccagatcgg caagcaggac
     3301 acgatcttcg caggcggctg cgaggacctc gattggacca tgtcggtcct gttcgacgct
     3361 atgggggcga tgtcgtcgaa gttcaacgac acacccgaaa aggcctcgcg cgcttatgac
     3421 gtggcccgcg acggcttcgt gattgcgggt ggtgccggtg tattggtgct ggaagagctt
     3481 gagcacgcga gggcgcgcgg cgcgaagatt tacgcggaag ttgccggcta cggggcaact
     3541 tcggacggct acgacatggt ggcgccgtca ggcgaaggtg cggtgcggtg catgcgcatg
     3601 gcactttcga ccgtcaaggc gccggtcgat tacgtcaatc cccatgccac cgccacccca
     3661 atcggcgatg tcaaagaaat tgaagcgctg cgcgaggtgt tcggtgcaaa atgtccgccc
     3721 atctcggcca ccaaatcgct ctccggccac tcactcggcg ccgccggcgt acacgaggcc
     3781 atctattcgt tgctgatgat gaacaacggc ttcatctgcg aaagcgccaa tatcgaaaac
     3841 ctcgacccgg agttcgccga catgccgatc gtgcgcgagc gtcgcgacaa tgtggcgctc
     3901 ggatgcgtac tgtccaattc gttcggtttc ggcggcacca acgcgtcgat cgtcctcaag
     3961 cggttggatg tttgacttta gaacgctttt ccttcccggc ttgccgggag ggttgaggag
     4021 ggggggcgct tgcaagagtt cggtgtcgtg gaattcactc cctcccttac cctctcccgc
     4081 aggcggggga gggaatagag ccgtgtccgg ctccgcgttc gaagacggga gtctccttga
     4141 atgttgatga gcggtaagcg cggcctcgtg atgggggttg c
//
LOCUS       DATILV010000950         5630 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4075807, whole genome shotgun sequence.
ACCESSION   DATILV010000950 DATILV010000000
VERSION     DATILV010000950.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5630
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4075807"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1048)
                     /locus_tag="VLJ17_22910"
     CDS             complement(<1..1048)
                     /locus_tag="VLJ17_22910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetamidase/formamidase family protein"
                     /protein_id="HSV25864.1"
                     /translation="MGPITMLSRIALVVGGALTAGTAALGQTPGPTPSTAPQLSPTAT
                     ITTPGYPAIGPADQKLRTVNLPGGKRVHLLPATLDTTQWGWFDNAQVPVLRVNSGDTI
                     VMETMMHSHNQVVPGTSIEQIKKLRTDFPGRGPHSLTGPIYIEEAQPGDVLKVTLNKI
                     VPRSYATNFNVPGLFGEFPNVYQDGQVKYLYLDLESMTTEFLPGVVVPLRPFPGTMGV
                     ARKEPGRYSSVPPGEYAGNMDIRDFVAGTTLYVPVYVPGALLWSGDSHAAQGNGEVNL
                     TAIETAYKELNITVEVVKGKPLDLPRIETPKSWITMGFDQDLNKAWAQAKAQTAKLLS
                     EQRTISAERAEVLMA"
     gene            complement(1869..2840)
                     /locus_tag="VLJ17_22915"
     CDS             complement(1869..2840)
                     /locus_tag="VLJ17_22915"
                     /inference="COORDINATES: protein motif:HMM:NF017206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSV25865.1"
                     /translation="MVEPIMKGRIIVLGGAGRLGRAAADAFKSAGWQVASLVRGSSAA
                     GAAPGTEIIEVDASDTESVIAAASDADVVLHALNVPYADWGRFALPLADTAIAAAQES
                     RATLVFPGNLYNYGAGMPDRIDETLPMHPTSRKGALRVAIETRMRDAAQTGLRTIILR
                     AGDYFGGNGVGSWFDRVVIKQIATGRLTYPGPLDTIHEWAYLPDLARALVRLVEERER
                     LPPFAMFGFAGHAVTGRDFAAAISRACRRDFKIDLMPWRLLKAIGVVVPALRELCDVS
                     YLWSAPHTIDGTRLAEIIGEIPHTPLDQAITASLTALGLRRRGGEIR"
     gene            2876..3070
                     /locus_tag="VLJ17_22920"
     CDS             2876..3070
                     /locus_tag="VLJ17_22920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin transmembrane helix small protein"
                     /protein_id="HSV25866.1"
                     /translation="MADFLSAYLVPLAIAAVAVVLVLGLYNMLRGGSPNLSQKLMRWR
                     VVLQFIAVIIIMLTVWAMGR"
     gene            3102..3686
                     /locus_tag="VLJ17_22925"
     CDS             3102..3686
                     /locus_tag="VLJ17_22925"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007615316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HSV25867.1"
                     /translation="MVVLNRIYTRTGDDGTTALGTGERRKKCDLRIASYGTVDETNAA
                     IGIVRLHTHHDAEIDAMLGRIQNDLFDLGADLSAPAPGEEKGSAGSRLTVSEAQVTRL
                     EAEIDRLNAALLPLRSFVLPGGTSAAAYLHLARTICRRAERMMVELADRPGEAVSAAA
                     LKYVNRLSDFLFVASRYVNQQGGGDVLWVPGKNR"
     gene            3817..4566
                     /locus_tag="VLJ17_22930"
     CDS             3817..4566
                     /locus_tag="VLJ17_22930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HSV25868.1"
                     /translation="MKVLVPVKRVVDYNVKIRVKTDGTGVELANVKMSMNPFDEIAVE
                     EAIRLREAGKITEIVAVSIGPQQASETIRTALAMGADRGILVKVDSIVEPLAVAKILK
                     GVVEAEQPGLVILGKQAIDDDCNQTGQMLAALLNWPQGTFASKVVIDGESVDVTREVD
                     GGLQTVRLKLPAIVTTDLRLNEPRYASLPNIMKAKKKPIADKTPADYGVDTTHRLEIL
                     NTAEPPMRKAGGKVGSVAELVGKLKNEAGIL"
     gene            4566..5507
                     /locus_tag="VLJ17_22935"
     CDS             4566..5507
                     /locus_tag="VLJ17_22935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HSV25869.1"
                     /translation="MPTLLLAEHDNKSLKDPTVKAMTAAKAIGAPVHVLIAGKDCRPA
                     AEAAAKLDGVAKVLVADAPSFEHMLAEPVALLIVALAPGYDTIMAPATTNAKNILPRV
                     AALLDVMQISDIVKVLSAETFERLIYAGNAVQTVRSKDGKKVITVRTSAFQAAGEGGG
                     ADCESVSAPPDPGISAFVSEEISKNDRPELTSARVIVSGGRAMASRENFAKYIEPVAD
                     KLGAAVGASRAAVDAGFVPNDYQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKVIV
                     AINKDEEAPIFQIADYGLVGDLFKILPELEAELERRQ"
     gene            5525..>5630
                     /locus_tag="VLJ17_22940"
     CDS             5525..>5630
                     /locus_tag="VLJ17_22940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HSV25870.1"
                     /translation="MDQLHRIGVIGAGQMGAGIAHVCALAGLEVALTDV"
BASE COUNT         1135 a         1651 c         1728 g         1116 t
ORIGIN      
        1 ttgccatcaa tacctcggcc cgttcggcag atatcgtgcg ctgctcggac aagagcttgg
       61 cagtttgggc cttggcctgc gcccaggctt tgttcaggtc ctgatcaaat cccatcgtga
      121 tccacgattt gggtgtttcg atgcgcggga ggtcaagcgg cttgcccttg acgacttcca
      181 ccgtgatgtt gagctcctta tatgcggtct cgatcgccgt gaggttgacc tcgccgttgc
      241 cctgggccgc atgggagtcg ccgctccaca gcagcgcgcc cggcacatag accggaacat
      301 agagcgtcgt gccggcgaca aagtcgcgaa tatccatgtt cccggcatat tcgccgggcg
      361 gcacactcga atagcggccc ggctccttgc gtgccacccc cattgtaccc gggaacggac
      421 gcaagggcac gaccacgccc ggcaggaact cggtcgtcat gctttcaaga tcgagataca
      481 gatatttgac ctgaccgtct tgatagacgt tcgggaactc gccgaacaat cctggcacgt
      541 tgaagttcgt ggcgtaggag cgcggaacga tcttgttcag cgtgactttg agcacgtcac
      601 ccggttgcgc ctcctcgatg taaataggcc ccgtcaaaga gtgcggcccg cgacccggga
      661 aatccgtacg caatttcttg atctgctcaa tagatgtgcc cggaaccact tgattgtggc
      721 tgtgcatcat cgtttccatc acgatggtgt cgccggaatt gacccgaagc actggtacct
      781 gggcgttgtc aaaccaaccc cattgggtcg tatccagcgt cgccggcagc agatgaactc
      841 ttttgccacc cggcaaattt acagtccgga gcttttgatc cgcggggccg atggctggat
      901 agccgggcgt agtgattgtc gcggtgggcg acagttgcgg tgcggtcgaa ggcgttggac
      961 caggggtctg ccccagcgct gccgtgccgg cggtaagcgc tccaccgacg acgagtgcaa
     1021 tccgtgaaag catagtaatt gggcccatgc gtttccccaa tcatcggatg gctgcgtacg
     1081 aggatgaggc tagcctattg ggggtgcgcc ggcaatcgct ggtcggcggg gcgaagtgaa
     1141 ccgcattggc tagcattcgg gcaagcaacg ttagacattc atgcagcgcg agatgagccc
     1201 taatcgaaaa gtgcgctaat cggagcgccg aaaaaagtgc aaggcatttt aagattctgt
     1261 ttcaattcat ttatcatact ggaccctatc catctgcctc gtgcacttgt gttggtggag
     1321 aggtggcttt tgtttcttcc cgggctaacc gtcgcttttg agcattatgg gtctcccggc
     1381 attttcccga gcaatagaac gccgtagttc tgcggtgaac gatcacattc ccgcacttca
     1441 ggcaaagacg tggagggtgg gattttgcga taggtttcat tgcgaagacc ccgggtgtcg
     1501 cggcctggag cttcgggcgg tacctgtaac ccgcgatcta ggtgatcggc gtctgcgcgt
     1561 tgcccgcaag aatgtggcca agatcggtag caccaaaaaa taactccact aatcggcaac
     1621 cgtggccggc accgctttgt tagcggtgca caatatgtcg caaaccgact aaaaaacaaa
     1681 agttcgatac aaacatgtca attgaaagta taataagaaa ccttacccac agcatttttt
     1741 cgtcgttttt ctatctataa gagtatttcg gctctgctgc tttgttcttt agtagcggcg
     1801 gttgcagtat cggcgttgtg gcagcctgcg acggagttgg cattttgatg gcgccggcat
     1861 cggccgcgtc accgtatttc tcctccccgc cgcctcaatc cgagggcggt aagcgaagcc
     1921 gtgattgcct gatccaacgg cgtatgggga atttcaccga tgatctccgc gagtcgggtg
     1981 ccgtcgatgg tatgtggcgc cgaccataga taggagacat cgcacagttc gcgcaaagcc
     2041 ggtacgacga caccgatcgc cttcaacagg cgccaaggca tgaggtcgat cttgaaatcg
     2101 cgccggcagg cgcgcgagat ggcggcggcg aaatcgcgcc ccgtcaccgc gtgaccagca
     2161 aatccgaaca ttgcaaacgg cgggagccgc tcgcgctctt ccaccaggcg aaccagagct
     2221 cgcgccaggt caggcagata agcccattcg tggatggtat cgagcgggcc cggataggtc
     2281 agccggcccg tggcaatctg cttgatgaca acccggtcga accaagaacc aaccccgttg
     2341 ccgccgaaat aatcgccggc gcgtaggata atcgtacgta gacccgtctg cgcggcatcg
     2401 cgcatgcgcg tctcgatagc aacccgcagc gcccccttgc gtgaggtcgg atgcatcgga
     2461 agggtctcat cgatccggtc cggcatgccg gcgccgtaat tgtagagatt gccgggaaac
     2521 actaacgttg cgcggctttc ctgcgcagcc gcgatcgcgg tatcggcaag cggaagcgca
     2581 aatcgccccc aatccgcgta aggtacgttg agggcatgga gcaccacatc agcgtcgctt
     2641 gccgccgcaa tgaccgattc ggtgtcgctc gcatcgacct cgatgatttc tgtgccgggc
     2701 gcggcgccgg cggccgaact tccgcgcacc aggcttgcga cctgccaccc cgcggacttg
     2761 aatgcatctg cggccgcacg gcccagccga ccggcgccgc ccaatacgat gatacgaccc
     2821 ttcatgatgg gttccaccat ggcggcgatg acgaacaagt gttaaggaaa cgcaaatggc
     2881 agactttctt tccgcatatc tggttccgtt ggcgatcgcc gccgttgccg tcgttctggt
     2941 gcttggtctc tacaatatgt tacgcggcgg ctcacccaac ctgtcgcaga aattgatgcg
     3001 ctggcgcgtc gtgctgcaat tcatcgccgt catcatcatc atgttaacgg tctgggcgat
     3061 ggggcgatag gacaaaaggc cttggccgga aaggctgcaa catggtggtt ctcaaccgca
     3121 tctatacccg caccggcgac gatggcacga cggcgctcgg caccggcgag cgccgcaaga
     3181 aatgcgatct gcgcatcgcc agctacggga cagtcgatga gaccaatgcc gccatcggca
     3241 tcgtgcgcct gcatacgcat cacgatgccg agatcgatgc catgctgggg cgtattcaaa
     3301 acgacctgtt cgacctcggc gccgacctca gtgcgccagc cccaggcgaa gaaaagggga
     3361 gcgctggcag ccggctgact gtcagtgaag cccaggtgac gcggctcgaa gccgagatcg
     3421 accgccttaa tgctgccctc ctgccgttgc gctcgtttgt gctgccaggc ggcacctcgg
     3481 cagccgcgta tctgcatctc gcccgtacga tctgtcgccg tgccgagcgg atgatggtgg
     3541 aactggccga tcggcctggc gaagcggtct cggcggctgc gctaaaatat gtgaaccggt
     3601 tgtcggattt tctttttgtg gcaagccgct atgtcaatca gcagggaggc ggtgacgtgc
     3661 tttgggtgcc gggcaaaaat cgctgatctc gacaaaggct tgccagacac gcaccgctgt
     3721 cggaattcgt aatcgcaccg tgccacagtg cgacaggcgc gttgacacgc tgcaatgcgg
     3781 gtcatagttt gcgcgccgct tccaggagag accaggatga aggttcttgt gcccgtcaaa
     3841 cgggtcgtcg attacaatgt caaaatccgg gtcaagaccg acggcaccgg cgtcgaactt
     3901 gccaacgtca agatgtccat gaatcccttc gacgagatcg ctgtcgagga agcaatccgt
     3961 cttagagagg ccggcaagat aacggagatc gttgcggttt cgatcgggcc acagcaggct
     4021 tctgaaacca tccggacggc gctggccatg ggagccgacc gcggtatcct ggtcaaggtc
     4081 gacagcatcg tggagccgct tgcggtcgcg aaaatcctca aaggtgtcgt cgaagctgag
     4141 cagcccggtc ttgtcatcct cggcaagcag gcgatcgatg acgactgcaa ccagaccggc
     4201 cagatgctgg cagcgctgtt gaactggccg caaggaacgt ttgcgtccaa ggtcgtgatc
     4261 gatggcgaga gcgttgacgt tacccgcgag gtcgacggcg ggttgcagac cgttcggctt
     4321 aagttgccgg cgatcgtcac caccgatcta cggctcaacg agccgcgcta tgcctcgctg
     4381 cccaatatca tgaaagcaaa gaagaagccg atcgctgaca agacgccggc cgattatggc
     4441 gtcgatacca cgcatcggct cgaaattctc aacaccgctg aaccgcccat gcgcaaggct
     4501 ggcggcaagg tcggctcggt cgccgaattg gtcggcaagt tgaaaaacga agcgggaatt
     4561 ctgtgatgcc gaccctcctg cttgccgagc acgacaacaa gagtctgaag gacccgaccg
     4621 tcaaggcgat gacggccgca aaggcgattg gggctccggt ccacgtcctc attgccggaa
     4681 aggactgccg gcccgcggca gaggcggcgg cgaagctcga cggtgtcgcc aaggtgttgg
     4741 tcgcggatgc gccttcgttc gaacacatgt tggcagagcc ggtggcgttg ctgatcgtcg
     4801 cgcttgcgcc cggctacgat accataatgg cgccggcaac gacgaacgcg aagaacattt
     4861 tgccgcgggt cgcggcgctg ctcgatgtca tgcagatatc cgacatcgtc aaggtgttgt
     4921 cggcggagac atttgagcgg ctgatctacg ccggtaatgc ggtgcaaacc gtgcgctcca
     4981 aggacggcaa gaaggtcatc acggtgcgca cttcggcgtt ccaggctgcc ggagagggcg
     5041 gcggcgccga ctgcgagtcg gtgtcagcgc ccccggatcc gggaatttcg gcctttgtca
     5101 gcgaagaaat ctccaagaac gaccggccgg agctcacctc ggcccgcgtc atcgtgtccg
     5161 gcggacgcgc tatggcgtcg cgcgagaact tcgccaaata tatcgagccg gtggccgaca
     5221 agctcggtgc cgcggtcggc gcctcgcgcg ctgccgtcga tgccgggttc gtccccaacg
     5281 actatcaggt cggccagacc ggcaagatcg tcgcacccga gctctatatc gcggtcggga
     5341 tttcgggtgc catccagcat ctcgccggaa tgaaggattc gaaagtgatc gtggcgatca
     5401 acaaggacga ggaggcgccg atcttccaga tcgccgatta cggtctcgtc ggcgatctgt
     5461 tcaagatcct acccgaactc gaggccgagc tcgagcgccg gcagtgacgg cgggatcggt
     5521 gtcgttggac cagctgcacc gcatcggtgt gatcggcgct gggcagatgg gtgccggcat
     5581 cgcccatgtc tgcgcgctcg ccggccttga agtcgcgctg actgatgtcg
//
LOCUS       DATILV010000951         1911 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4839644, whole genome shotgun sequence.
ACCESSION   DATILV010000951 DATILV010000000
VERSION     DATILV010000951.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1911)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1911)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1911
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4839644"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(628..>1911)
                     /locus_tag="VLJ17_22945"
     CDS             complement(628..>1911)
                     /locus_tag="VLJ17_22945"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HSV25871.1"
                     /translation="PPDGRSNMSEPESNSQSMAFLERFTQLRETVERPPEQRPAADQI
                     DAIAEWLVGPARRLPTGAAAFDEFSWRMLATGLPLLRVTMHGGTLHPLYLGAALIWWR
                     TTGQTELRMITHEVRESFAYNPISRVREDGETLRRRLDTAPDTFDFPVLHELMAAGAT
                     DYLALPVASAFGGNYAVTFVSDRVGGFTDDEVADMSRVAQRLPVVMDMHSLRAIADNL
                     LTAYLGPMTGPRVLAGHIRRGQGDTITAVLWSSDLRAFTARSDRLPGQRMIEILDALF
                     DAQARSIAAHGGEILKFIGDGLLAIFPITDAGLAGIATHRALEAAKESLEALRQLGDD
                     PLLEGEPPLKIVIALHVGQVLYGNIGAADRLDFTVIGPAVNLVSRLEAVAKSLDLPIV
                     VSDHFAQAYGKPLTSLGFHQLRGRTTPHELFAPLQ"
BASE COUNT          371 a          546 c          608 g          386 t
ORIGIN      
        1 aaccgcggcc tgtaggacgc aaaaatccga gcaggtgctt ccgcttattg aaatcgggtg
       61 acaagttctc cctacgacta ctttagggag gggacagatt ggtgtttcaa tgggtggcga
      121 gggcggtcgc gagtttttcc actttaagtt aagtcgagag cctccttggt cgcggagaac
      181 ctatgcctac gtcagcattt cctagtcctc cggcgtcggc accccggcca gggatgcggg
      241 acgctgatcg gcggttctgg atcccggcta gtcaccggtt ctgggcctgg cgcggtacgc
      301 tgctatttgt gaagcccgaa gcggtgcctg gctggcatcg gaagggatgg aaggatgtgt
      361 tttcgcctcc tttggcatac cgccaccggg gatctaatat aactggctga ttttactggt
      421 attttggata atattgcaac cttggttgcc gttgtgaaag ggcgatgaat tttgttcggt
      481 ataggtggtt tcgttccccc gtaaccaccg atagcgaagc cgtccgtttg ggatcaatgg
      541 attcgttagc ctcgactttc cgtgcaatat cgattgtacg cttgatgcct ttcccggcca
      601 cgcaagatcc ggcgatcgat gcgcccccta ttgcaatgga gcaaacagct cgtgcggagt
      661 cgtgcgaccg cggagctgat ggaagccaag cgaggtgagc ggcttgccat aggcttgagc
      721 gaagtggtcg ctgaccacga tggggaggtc cagcgatttg gcaaccgcct caaggcgact
      781 cacaagattg accgcgggcc ctatgaccgt gaagtcgagg cggtcagcgg cgccgatatt
      841 gccatagagg acctgtccaa catggagggc aatcacgatc ttcaggggcg gctcgccctc
      901 caggagaggg tcgtcgccaa gttggcgcag ggcttccaat gactctttcg ctgcctcgag
      961 ggcccggtgc gtggcgatcc ccgccaggcc tgcatccgtg atcggaaaga tcgccaagag
     1021 tccgtcaccg atgaatttca ggatttcacc gccatgggcg gcaatcgatc tggcttgagc
     1081 atcgaagaga gcatcgagaa tttcgatcat ccgctggccg ggcagccggt ccgaccgcgc
     1141 cgtgaaagcg cgcagatcgg aagaccagag tacggcggtg atcgtgtcgc cttggccgcg
     1201 gcgaatgtgg ccagccagca cacgcggtcc tgtcatcggg ccaaggtatg cggtcagcag
     1261 gttgtcggcg atggcacgaa gtgaatgcat gtccatcacc accggtaggc gctgtgcaac
     1321 ccgtgacatg tccgcgacct cgtcatcggt gaaccctccc acccggtcgc tgacgaaggt
     1381 cacggcatag ttgccgccaa aggcgctggc gaccggaaga gccaggtagt ctgtggcgcc
     1441 ggccgccatc aactcgtgca gcaccgggaa atcgaatgta tcgggcgcag tatcgaggcg
     1501 tcggcgcaag gtctcgccgt cctcccgcac tcgcgagatt ggattatagg cgaacgactc
     1561 gcgtacctcg tgcgtgatca tccttaattc ggtctgcccc gtcgtgcgcc accaaatcag
     1621 cgccgcaccg agatacaacg gatgaagcgt gccgccgtgc atggtcacgc gaagcagcgg
     1681 cagcccagtt gccaacatgc gccacgaaaa ctcgtcgaag gcagcggcgc cggtcgggag
     1741 ccggcgtgca gggccgacca accattcggc tatcgcatcg atctggtcgg ccgcagggcg
     1801 ctgctccggc ggacgctcga ctgtctcgcg cagttgcgtg aagcgctcta gaaaggccat
     1861 ggattgcgaa ttcgactcgg gctcgctcat gtttgatcgg ccgtcagggg g
//
LOCUS       DATILV010000952         3115 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4326499, whole genome shotgun sequence.
ACCESSION   DATILV010000952 DATILV010000000
VERSION     DATILV010000952.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3115
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4326499"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..874
                     /locus_tag="VLJ17_22950"
     CDS             <1..874
                     /locus_tag="VLJ17_22950"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV25872.1"
                     /translation="LVVPFAPGGPADVIGRIIGQQLNIILGQSLVIENRGGAGGTIGA
                     RFAAAAEPDGYTLMFANTSTMSINPAVYRHLDYDPAKAFAPVALIGTTANIVVVNPAL
                     PVKTIAELIAYGKANPGKLSYSTPGVGTPPHMIGEMFKQRTGLDITHVPYKGGGSSTQ
                     DVVSGQVPLTFENPAISLPLVLAGQIRPLAVTSDVRNPRIPDVPTLSETIPDFVSASF
                     TGIVAPAGVSSAIITRLNVAIAESLQAPGVLATLTQLSVDVKPGTPEEFGAFLAKERE
                     KWLAVAKAAKIELD"
     gene            1161..2411
                     /locus_tag="VLJ17_22955"
     CDS             1161..2411
                     /locus_tag="VLJ17_22955"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSV25873.1"
                     /translation="MTVIPRRAADVASKTLLSTLKTAFGTSLAALLAFMLAAFQIGCH
                     ASAQPALERPSNDADIVRVRPDQMRQLSIVKVVPHPFRLQKQAIGQIAFNEDASTVVL
                     TPFSGRVTRVIGKLGNDVKRGDPLFEIDSPEVVQAQTDLIAAFQGLQKARSQLALAKR
                     VLDRLTTLFAGHAVSQREVDQAQNEYAAAEFDLRTAEGTLTSARNRLRVIIGRDQAEV
                     ERVERERVVNPLITINAEIDGTIIGRKVGPGQFVRSDAGEALYTIADLSTMWLKANVP
                     EFDSPLIRVGQEIEVRVPALPGRVFRARITAVGASSDAATRRVMVRSELPNPDRALKS
                     EMFASFKISIGDNDRTLSVPVEAVIWQGDVGIVWVEREPLVFERRRVKVGLEQDGRLQ
                     INDGLEANELVVGRGAIYVENELQ"
     gene            2438..>3115
                     /locus_tag="VLJ17_22960"
     CDS             2438..>3115
                     /locus_tag="VLJ17_22960"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSV25874.1"
                     /translation="MLRNLIAFCLSRRPLVLITYAGFIVVGAAAFQTMNIEAYPDPAP
                     PIIEIIAQYPGQSPEEVERYVTIPIEIAVASTPGLKYIRSNTVYALGFIRLQFEYGRD
                     YYFVRQQTLNRLKEAVLPSAVQPVISPGGGVSEIFRYELKGPPDMDLIELKTLQNWVV
                     ERKLRTVAGVADVATIGGKTKEFQAEVDLNLMMAYGLTLPQIMNAISSGNSNVGGRTI
                     EMGEQSVN"
BASE COUNT          637 a          915 c          946 g          617 t
ORIGIN      
        1 gctcgtggtg ccgtttgcac ctggaggtcc ggccgatgtg atcggccgga tcatcggcca
       61 gcagctcaac atcattttgg gccagagtct cgtgatcgag aaccgcggcg gcgcgggcgg
      121 caccatcggg gcgcgctttg ctgccgcggc cgagcctgac ggctacaccc tgatgttcgc
      181 caacacctcg accatgagta tcaacccggc cgtctaccgg catctcgatt acgaccccgc
      241 caaggcattc gccccggtgg cgctgatcgg caccacagcc aatatcgtgg tggtcaatcc
      301 ggcattgccg gtcaagacga tcgccgagtt aatcgcctac ggaaaggcca atcccggcaa
      361 gctcagttat tcaacgcccg gcgtcggaac gccgccccat atgatcggcg agatgttcaa
      421 gcagcgcacc ggcctcgata tcacccacgt tccttacaaa ggtggtggga gctcgaccca
      481 ggatgtggtc tccggccagg tgccgcttac ctttgagaat cccgccatat cgctgccgct
      541 ggtgctggcc ggccaaatcc ggccgctcgc ggtgacgagc gatgtccgca acccccgcat
      601 tccggacgta cccactttaa gcgaaaccat cccggacttc gtgtcggcat cgttcaccgg
      661 catagtggcg ccggccggcg tgtcatccgc catcatcacg aggctcaacg tggccatcgc
      721 cgaaagcctc caggcccctg gcgtcctggc aacacttacc cagctttcgg ttgacgtaaa
      781 gcctgggacg ccagaagaat tcggggcatt tctggccaag gaaagggaaa aatggctggc
      841 tgtcgccaag gcggcgaaga ttgagcttga ttgagttccg tgcgaccaac atggaggggt
      901 gtaatgcggc tgggtgggca actagcaaat ctcagctgca gtgagtggct tgcccgcaag
      961 gcggcacgca cttgttgatt cggcgccgga aaccgcttat cgattcggct cgttgccgag
     1021 aatattgcca gattgcccag caaaatggca tggttggtcg tgcaacggac tgcctccgtg
     1081 agttggcgca actccttgca attctgcctt cagactgggc tcagctgagt tgtgcccttt
     1141 tcacgggaga gagcaccctg gtgacagtga taccgcgacg tgcagcggac gtcgcgtcga
     1201 aaaccctgct cagtacactc aagaccgcat tcggcacgtc tttggcggcc cttttggcgt
     1261 ttatgctcgc agcgttccag atcgggtgcc atgcgtcggc acaaccggcg cttgagcgac
     1321 cttcgaatga cgcagacatc gtgcgggtca ggcccgacca gatgcgtcaa ctgagcattg
     1381 tgaaggtcgt tcctcatccg tttcgtttgc agaagcaagc gatcggtcag attgccttca
     1441 acgaggatgc cagtacggtt gtgctgacac cgttctccgg tcgcgtcacg cgcgtaatcg
     1501 gcaagctagg caacgacgtc aagcgcggtg atccattgtt cgaaatcgac agcccggagg
     1561 tggtgcaggc gcagaccgat ttgatcgcgg cgtttcaggg ccttcagaaa gctagatcgc
     1621 aacttgcact ggcgaaacgc gtgcttgacc ggcttaccac ccttttcgcc ggccacgcgg
     1681 tgtcacaacg tgaggtcgat caagcgcaaa acgaatatgc tgcagccgaa ttcgacctta
     1741 ggacagctga gggcacgctg acatcggctc gcaatcgcct gcgggtcatc atcggccgtg
     1801 accaggctga agtggaacgg gtggagcggg agcgggtcgt caatccgctg atcaccatca
     1861 atgcggagat cgacggtacg ataattggcc gcaaggtcgg tcccggccag tttgtgcgaa
     1921 gcgatgcggg cgaagcccta tacaccatcg cggatctctc cactatgtgg ctcaaagcta
     1981 acgtaccgga gtttgacagc ccgctgattc gggttggcca ggagatcgag gtcagagtac
     2041 cggcccttcc tggccgggtc ttcagagcgc gcatcaccgc agtcggcgca tcgtccgatg
     2101 cagcgacacg acgcgtcatg gtccgctcgg aactcccgaa tcccgaccgg gctctcaaat
     2161 ccgaaatgtt cgccagcttc aagatatcta ttggcgataa tgaccgtacc ctgtcggttc
     2221 cggtcgaagc cgtgatctgg cagggcgatg tcggcatcgt ctgggtcgag cgggagccgc
     2281 tggtctttga gcggcgcagg gtgaaggtcg ggttggaaca ggacggtcgc ttgcagataa
     2341 acgatggcct tgaggcgaat gaactcgttg tcggccgcgg tgcgatctac gttgagaatg
     2401 aattgcagta ataacccaca catgaacgag tgcagcgatg ctgcgtaatc tgatcgcatt
     2461 ctgtttgtcg cggcggccgc tggtgcttat cacatatgca gggttcatcg tagttggcgc
     2521 ggctgcattc cagacgatga acatcgaggc atatcctgat ccagcgcctc cgatcatcga
     2581 aatcatcgcc caatatcccg gccagtcacc ggaggaggtg gagcgctacg ttacgatccc
     2641 gatcgagatc gcagtcgcca gcacacccgg actgaagtac atccggtcga acaccgtcta
     2701 cgcgctgggc ttcatccgtc tgcagttcga atatggccgg gactactact tcgtccggca
     2761 gcagacgctc aacaggttga aggaggccgt tctgccctcg gccgtacaac cggtgatttc
     2821 accgggcggc ggcgtcagtg agatattccg ctacgagctc aaggggccgc cagatatgga
     2881 cctcattgaa ctcaagacgc tgcagaactg ggtggtggaa cgcaagctgc gcaccgtggc
     2941 aggtgtggcg gatgtggcga caatcggcgg caagaccaag gaatttcagg ctgaggtcga
     3001 cctgaacctg atgatggcat acgggttgac cctgccgcag atcatgaatg cgatctcctc
     3061 cggcaactcc aacgtcggcg gccggaccat cgaaatgggc gagcagtcgg tgaat
//
LOCUS       DATILV010000953         1965 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_5087464, whole genome shotgun sequence.
ACCESSION   DATILV010000953 DATILV010000000
VERSION     DATILV010000953.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1965)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1965)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1965
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5087464"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            187..1263
                     /gene="ugpC"
                     /locus_tag="VLJ17_22965"
     CDS             187..1263
                     /gene="ugpC"
                     /locus_tag="VLJ17_22965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     ATP-binding protein UgpC"
                     /protein_id="HSV25875.1"
                     /translation="MASVAIRGVRKAFGSVNVIHDVNVDIADGEFVVLVGPSGCGKST
                     LLRMIAGLEHISGGEIFISDRVVNYLPPKERDTAMVFQNYALYPHMTVAANMGFSLRL
                     RGASATEIAERVNRAADILGLTPYLDRYPRQLSGGQRQRVAMGRAIVRDPKVFLFDEP
                     LSNLDAKLRVQMRTEIKGLHQRLKTTTVYVTHDQIEAMTMADKIVVMHDGRVEQIGAP
                     LDLYDRPDNLFVAGFIGSPAMNFFSGTIRLNGSLGFDGPGGLRLPLRAPEQRTAGLSD
                     DMPVVYGVRPEHFTLADDGVEAEIQVVEPTGSETHLVAKLGGQDVLALFRERHQLKPG
                     DRVRLKPDVGLIHLFDKATGKRLN"
     gene            1313..>1965
                     /locus_tag="VLJ17_22970"
     CDS             1313..>1965
                     /locus_tag="VLJ17_22970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV25876.1"
                     /translation="MIDFTRRTLIKGGTAAAAAGALAGPALLEWAQAWAQAAPWKPEK
                     NAQLALLRWKYFVQEEDDAFVALLDTFTKATGVKVIVARESFEDVQPKASVAANTGAG
                     PDLVWGLYSVPHLFPQKCLEVTDVADYLGKKYGPWAPSAVTYGKSGNKWIDIPVCYTG
                     SLMNYRISSLKKAGFSKFPTTTDEFLELAKATKKSGTPGGMALGHASGDGNTWAYWCL
                     "
BASE COUNT          397 a          597 c          600 g          371 t
ORIGIN      
        1 cggcacggat ggcggctctc ggagatggtc gacatcaggc gcctttctct acggcgtgcc
       61 gcccggcaag gaggcgccgt tcgggccgaa cgaaccatag gtgcattgca cgcgtcgttc
      121 ggtcaccttc cgggatcggg aaatgaagaa cttaatgcat catgtagcga ctttaaggag
      181 ggcacaatgg cgtcggtggc gatccgtggc gtccgcaagg cgttcggatc ggtcaatgtg
      241 attcatgatg tcaatgtgga tatagccgac ggcgaattcg tcgttttggt cggcccgtcg
      301 ggctgcggca agtcgactct gttgcgcatg atcgcgggcc tcgagcacat cagcggcggc
      361 gaaatattca tttcggatcg cgtcgtcaac tatctgccgc ccaaggagcg tgacaccgcc
      421 atggtgttcc agaactacgc tctctatccg cacatgacgg tcgcggcaaa tatgggcttc
      481 tccttgcgcc tgcgaggcgc gagcgcgaca gagatcgcgg agcgcgtcaa cagggctgcg
      541 gacattctgg gacttacgcc ctatctcgat cggtatccgc gccagctctc gggcggccag
      601 cgccagcgtg tcgccatggg tcgggccatc gtgcgcgatc ctaaggtgtt cctgttcgat
      661 gagccgttgt cgaacctcga tgccaagcta cgagtgcaga tgcgcaccga gatcaagggg
      721 ctacaccagc ggctcaagac caccaccgtc tatgtcaccc acgaccagat cgaggccatg
      781 accatggcgg ataagatcgt ggtgatgcac gatggccgcg tcgagcagat cggcgcaccg
      841 ctcgaccttt atgacagacc cgacaacctc ttcgtcgcag gcttcatcgg ctcgccggca
      901 atgaactttt tttcgggcac catccgcctg aacggcagcc tcgggtttga cggccccgga
      961 ggcttgcgcc tgccgctacg cgcgccggaa caacgcacag ctggattgtc cgatgacatg
     1021 ccggtcgtct atggcgtacg tcccgagcac ttcacgcttg cggacgacgg tgtcgaagcc
     1081 gaaatccagg tggtcgagcc gacaggctcg gaaacccacc tggtcgccaa actcggcggc
     1141 caggatgtgc ttgcgttgtt ccgcgaacgc catcagttga agcccggcga ccgcgtgcgt
     1201 ctcaagcccg acgtggggct cattcatctg ttcgacaagg cgaccggcaa acgactcaat
     1261 tgaattccct gcccgcaagc ggaggcagtg agatgaaacg gaggaccaca acatgatcga
     1321 tttcacacgt cgcaccctca tcaagggagg aaccgcggct gcggcggccg gcgcactcgc
     1381 cggaccagcg ctgctcgagt gggcgcaggc ttgggcgcag gccgcgccgt ggaaacccga
     1441 gaagaacgca cagcttgcct tgctgcggtg gaaatatttc gttcaggaag aagacgatgc
     1501 gttcgtcgcc ctgctggata ctttcaccaa agcgaccggt gttaaggtca tcgttgcccg
     1561 ggagtccttc gaagacgtgc agccgaaggc ctccgttgcg gccaataccg gcgccgggcc
     1621 agatcttgtc tggggcctct attcggtgcc gcatctgttt ccacaaaaat gcctcgaggt
     1681 aactgacgtg gccgattacc tgggcaagaa atacggcccg tgggcgcctt ccgccgtcac
     1741 ctacggcaag agcggaaaca aatggatcga cattccggtc tgctacaccg gaagcctcat
     1801 gaactatcgg atttcgtcgc tgaaaaaggc cgggttctcc aaattcccga ccaccaccga
     1861 cgagtttctc gaattggcca aagcaaccaa gaaaagcggt acgcccggcg gcatggcgct
     1921 cggccacgca tcgggcgacg gcaatacctg ggcttattgg tgcct
//
LOCUS       DATILV010000954         1585 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3555450, whole genome shotgun sequence.
ACCESSION   DATILV010000954 DATILV010000000
VERSION     DATILV010000954.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1585)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1585)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1585
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3555450"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1020
                     /locus_tag="VLJ17_22975"
     CDS             <1..1020
                     /locus_tag="VLJ17_22975"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV25877.1"
                     /translation="AVIFLMALSTLAIGLLPTYAQVGVLAPVLLVICRLLQGLSAGGE
                     WGGSTSYIVEYAPEGRRGFIGSWQQVSVGSGFLLGSLSAALLSSTLSPEAFMSWGWRI
                     PFLLGILVGILGAYLRWRLNDTPKFTEIAQHGEVAKAPLTEAFTKYRRETLTIFGLTL
                     HNTVAYYIPIIYMTSYIVSVAKLAPSSALWIGTSCLLVFVILIPIWGALSDRIGRKPL
                     LMLSCGGYIVLAYPLFMMASSGSPMLALVAQMVMIVFLSFFSGACPAVYSELLPTRVR
                     YTALSIGYNTAVAIFGGFAPFIATWLIGVTGSNLAPSYYLIAAATITFLVVLRIPETA
                     FEPLR"
BASE COUNT          286 a          503 c          431 g          365 t
ORIGIN      
        1 gcggtcatct ttctcatggc actttcgacc ctggcaatcg ggctactgcc gacctacgcc
       61 caagttgggg tgctggcacc cgttctgctc gtgatctgca ggctgttgca ggggctgtct
      121 gctggcggcg agtggggcgg atcgacctcc tacatcgtgg aatacgcacc ggaaggacgc
      181 cgcggcttca tcggatcgtg gcaacaggtc agcgtcggct cgggcttcct gttgggttcc
      241 ttaagcgctg cgctcctcag ttcgaccctt tcgcctgaag ccttcatgtc ttgggggtgg
      301 agaatcccgt tcctgctcgg cattctcgtc ggcattctcg gggcctacct acgctggcgg
      361 ctcaacgaca cgcccaaatt caccgagatc gcgcagcacg gggaagtcgc caaggcgccg
      421 ttgaccgagg ccttcaccaa gtatcgccgc gagacgctca ccatcttcgg cctcacgctg
      481 cacaacactg tcgcctacta catacccatc atctacatga ccagctacat cgtgtcggtt
      541 gcaaagctgg cgccatcctc ggcactgtgg atcggcacaa gctgcctgct ggttttcgta
      601 attttgatcc cgatctgggg cgcattgtcc gaccgcattg gccgcaagcc gctgctgatg
      661 ctctcctgcg gcggctatat cgtcctcgcc tatccacttt tcatgatggc gtcctcgggc
      721 agccccatgc tggcgttggt cgcccagatg gtgatgatcg tatttctgtc attcttttcc
      781 ggcgcatgcc ccgcagtcta ttccgaactc cttccaaccc gcgtgcgcta caccgccttg
      841 tcaatcggct acaacaccgc ggtggcgatt ttcggcggct tcgcgccctt catcgcgacg
      901 tggctgatcg gtgtgaccgg cagcaacttg gcaccgtctt actatctcat cgcggccgcg
      961 acgatcacgt tcctcgtcgt gctcagaatt cccgagacag cgtttgagcc gttgcgttga
     1021 cccgctggtg catgagttgg gaccccattg cccgaaatgg gtagcgatca cggtggtgga
     1081 tcgaccggtg cagactttca cccgtttgat cgttgatcga tcatcaagag cttgcatcgg
     1141 gcaggctgaa cggacatttc agttacttaa cgcgtccgcc attggccacg cacttgttaa
     1201 agtaagctcg ttcgtcttgc accgttccct ttgcaagacc tgctgcagga atacccggcg
     1261 cccgcggagg aaacgccttg gcggttagag cagcacactt tctgccgacc gcgccgctaa
     1321 tagctgacgc gttgcccgtc atgcacccaa cggcgatgca aaccaaacca acaagcgcac
     1381 ttccaaattt taggttggcg accataggat tgtcctggct caatcatcac ataacaaaac
     1441 atatataccc gggcagcgcg gtgaccgaaa gcgaccatca ctctgctggc tgcggatctg
     1501 cctgcttagg aaatatgttg cgagcttacg cgcttctgcc tcggcatcga catgccgctg
     1561 ccgctgatga tccgcgccga cgaga
//
LOCUS       DATILV010000955         2770 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2279041, whole genome shotgun sequence.
ACCESSION   DATILV010000955 DATILV010000000
VERSION     DATILV010000955.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2770)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2770)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2770
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2279041"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..216
                     /locus_tag="VLJ17_22980"
     CDS             <1..216
                     /locus_tag="VLJ17_22980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25878.1"
                     /translation="AAPSILFVANAREDTGPRKCDVIDIYEKEDGAGRQLGRFVYGWR
                     DHKLHPNPRKPGPGRFWPRYNLSIANP"
     gene            252..527
                     /locus_tag="VLJ17_22985"
     CDS             252..527
                     /locus_tag="VLJ17_22985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25879.1"
                     /translation="MDTRDPASRPMASPSAITHLKVTLNPPALDFSKREDVERWLADN
                     PRDVAVAFAARAALRVVPLLDTVLRPRGGRVSRVGSRGPFLGRNQFL"
     gene            808..1044
                     /locus_tag="VLJ17_22990"
     CDS             808..1044
                     /locus_tag="VLJ17_22990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25880.1"
                     /translation="MKSSLKEKMMRKVLLAVSALAVVGVVAPLGATAQAEESRVVIRE
                     HRDHPRIFDRFHRHDYDRYRHHDHRTLIIKKRDY"
     gene            1348..2319
                     /locus_tag="VLJ17_22995"
     CDS             1348..2319
                     /locus_tag="VLJ17_22995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25881.1"
                     /translation="MLNTRDRAEPYRCLAEECRRLATSTPSSQMKNRYLVMAQDYMGL
                     ADLKEQAHAYRTPATVKENAAAWAATMTNGFSAPWRIIEIPHGFAVEDAAEQQLAVFY
                     GLAEPNTVRQTDSLTIDEARQMAVDFANLPAVAGLRLAETVPKFTSFEPDEWMPTPLL
                     PRPSDPLSNRTKFLIAIVVAALPAGYFIFRNFDRPVDVAAVSQATTDVPLVEFSSARE
                     ADAPSTKTTGITVEGRVEPVQTAPLPAPLDTKPTEGDIRAGPPQMLPERGRQSFAVSR
                     DDSCLPSASAVRENHPGAWPSWTLRAPGHEGTRCWYATGRATAHNHP"
BASE COUNT          623 a          796 c          774 g          577 t
ORIGIN      
        1 gccgcccctt ccattctgtt cgtggccaac gctcgcgaag acacggggcc gcgcaagtgc
       61 gacgtcatcg acatttacga gaaggaagac ggtgccggcc gccaactcgg tcgtttcgtc
      121 tacggctggc gggaccataa actgcatcct aatccgcgca agcctggccc cggcagattc
      181 tggccccgct ataacctgtc catagcgaat ccgtaaatta ggctgcgatt ggcgtcattt
      241 gcgaattcgt catggacacg cgcgatcctg cgtctcgacc gatggcgtcg ccctctgcaa
      301 taacccatct caaagtcaca ctaaatccgc cagccctcga cttctcaaag agggaggacg
      361 tggagcgctg gctcgcagat aatccgcgtg acgttgcggt cgcatttgcg gcccgggcgg
      421 cgcttagggt tgttccgctg ttggacaccg tgcttcggcc gcgcggcggc agggtctcac
      481 gcgtcggcag ccgcggaccg ttcctcggcc gaaaccaatt cctatgaacc tccgaaaatg
      541 ccgtgcgtat ccagatcgca gtcgcggcac gctggtgcat ttcctggccg aggtgtgtcc
      601 gcgctcgcgt ccgttccgca aggacagcgc cgaggccgcc aggcgcaaaa agagacgcca
      661 gatcgaagca tagccgggcg cgtgtgaggc caaccacagc atatttggtg gcagtgcatc
      721 cgaaatagtg aaatgaagca gcccaaatga acggctgttc agaaaattat ccggaacggc
      781 cggggcgtct cagacgttgc gttaccgatg aaaagtagtc tcaaggagaa gatgatgcgt
      841 aaagttttgt tggcagtgag tgcgctcgcc gttgtgggcg ttgtagcgcc gctaggtgcg
      901 acggcgcagg ctgaagaaag cagagtggtc attagggaac atcgtgacca tcccaggatt
      961 ttcgaccggt tccatcgcca tgattacgac cgctatcgtc accatgacca taggaccttg
     1021 atcatcaaaa agcgggacta ttgagcttcg caagagtccg gctatcgccc tgtctttctc
     1081 gatattcacg aacgcggctc aagaacgctg ataggggcgc ggcatgagtc gcaatgtgtg
     1141 atcgcctatc gaagtagctg ggcgaaaaat actctcggcg tctttgccct gtgcgaacca
     1201 atctataagg cagtgttttt tcatagatgt aatattgttt cgtaattcac tcccctcttt
     1261 gtggcaacgg cgttttcgag gaccttttta tttcggtgct gatgtagcac ttgtccgcca
     1321 ctgtctttct tttagaggac gtgtcctatg ctgaacacgc gcgatcgagc agaaccttat
     1381 cgctgcctcg cggaggagtg tcgccgccta gccacaagta ccccctcaag ccaaatgaaa
     1441 aaccgttatt tggtcatggc gcaagattac atggggctgg ctgacctcaa ggagcaagcg
     1501 cacgcgtacc gcaccccggc gacggttaaa gaaaatgccg ccgcttgggc tgctaccatg
     1561 accaacggct tttcagcgcc gtggcggatt attgagatcc cgcacggatt cgcggtcgag
     1621 gacgccgccg agcagcaact cgccgtgttt tatggactgg ccgagcccaa cactgtaaga
     1681 caaaccgact ccctgacgat cgacgaggct cgccagatgg cagttgattt cgcaaacctg
     1741 ccagcagtcg cgggcttgcg tttggctgag acggttccaa aatttacctc gttcgagcct
     1801 gacgagtgga tgcctacccc attgttgcct cggccaagcg atccgctttc caatcggaca
     1861 aaattcttga tcgcgattgt cgtcgctgcg ctgcctgctg gttatttcat ctttaggaat
     1921 tttgatcgcc cggtcgacgt tgcggccgta tcgcaagcta caaccgatgt accacttgtt
     1981 gaattttcat cggcacggga agccgatgct ccctcaacta agacgacggg cattacggtc
     2041 gagggcagag ttgagcctgt gcagacagca ccattaccgg cacctttgga caccaagccg
     2101 accgagggtg acattcgggc gggaccgccg caaatgttgc cggaaagagg aaggcaatcg
     2161 ttcgcggtaa gccgagatga ttcctgctta ccgtcggcgt cggccgtgag agagaaccat
     2221 cccggagcat ggccgtcctg gaccttgaga gcacctggtc atgagggcac cagatgctgg
     2281 tacgccacag ggcgagccac agcacacaac catccatgag atgccaggag agagagtcca
     2341 acaacagaga attggcaccg ctctattggg ttaatcactc ttgttccgcg tcacgcctct
     2401 atcgccttcc ggccggcggc agtgattcgg attatcgccg atcagctgtc cagcggacac
     2461 tgatacgaag cgcgctcatc tggcagtaga taactcttgg caatatttca ctgcagtttc
     2521 gaccgaaatg atgacgccct ccgaatcctc ccaaatgacg gaaaaggggg aaaacattcc
     2581 cgcctacaat ttttgcaatc attggaattg cgcagacgga cgaatgcaag gccgatcgtg
     2641 cagagtacga cgccgaaatg gcggagacgg caaaaaaaca atccgccgcc aagtacgcca
     2701 gacataagcg cgccgtctta tcccaaaagt caataagacg cccccacgcc gctcgcgccc
     2761 acatggcgcg
//
LOCUS       DATILV010000956         7490 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2030497, whole genome shotgun sequence.
ACCESSION   DATILV010000956 DATILV010000000
VERSION     DATILV010000956.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7490)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7490)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7490
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2030497"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..755)
                     /locus_tag="VLJ17_23000"
     CDS             complement(<1..755)
                     /locus_tag="VLJ17_23000"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF024758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S1C family serine protease"
                     /protein_id="HSV25882.1"
                     /translation="MRSFLGSVVVMYTCTLLLGIMLVVSPNIVAQAQSPTLDQLLSGV
                     VHIKTFITPDGRTTENLGHEREGSGIVIDNNGLILTIGYLMVEAISAEITTNDGRTVA
                     ANAVGYDNESGFGLLQTITPLKVRALQMGKASEIKVGDPVVIASYGGQSGVAPVHVVA
                     KREFAGNWEYLLDEAIFTAPPHPAWSGAALISHDGKLVGVGSLVVGDTSGKGDGVRGN
                     MFVPIDRLAPILADLIADGRPAVAHPWIGLNTD"
     gene            complement(1148..2356)
                     /locus_tag="VLJ17_23005"
     CDS             complement(1148..2356)
                     /locus_tag="VLJ17_23005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HSV25883.1"
                     /translation="MSKNSSRTAGRHFLQIPGPTPLPDRVLRAMDTPIIDHRGPEFIK
                     LAKRVLDGIKTIFKTTNPVIIYTATGTGAWEAALVNTLSAGDRVLMVETGQFAALWKN
                     MAGKLGLRPEFIPTDWRIGADPTTIEAKLKEDKAHEIKAVCVLHNETATGCLSPIVEI
                     RQAIDRVGHPALLMVDTISSLASTDYRHDEWGVDVTIGGAQKGLMLPPGMSFNALSEK
                     AIAASKTSNLPKSFWSWEDMLNMNRLGLFPYTPATNMLHGLAAAIDMLHEEGLDNVFS
                     RHARFAEATRRAVGAWGLEILCRDPKYYSPTVTAVLLPEGHNADQLRDLALDHFDISY
                     GMSFGKLAGKYFRIGHLGDTNDLTILGALAGTEMALTLAGVPIRKGGVQAAMDYIVSA
                     HADPQRAAAE"
     gene            2478..5423
                     /locus_tag="VLJ17_23010"
     CDS             2478..5423
                     /locus_tag="VLJ17_23010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HSV25884.1"
                     /translation="MTVVAAPGLERRLRAEVSGDVWFDRFTRGRYATDASHYQMMPVG
                     VVAPRSVAEAERAIALARADGVTVLPRGGGTSQSGQTVNHSLVLDCSKYLNRVLDLDV
                     AGRRCVVEPGIVLDELNRKLKPHGLWFPVDISTASRATIGGMAGNNSCGARSLRYGVT
                     RDNVLSIDAVLADGSAAHFGPVGAGLRDLPVGSPLRLLAEDLLAIGVRESDEIAVRFP
                     KVQRRVGGYNLDALAPNAPAHNLAHILVGSEGTLGFSTKIELKLWPLLGRRAVGACHF
                     GRFYDAMDAAQHIVKLKPIAVELIDRTMIELARNIDMFGPTIDAFVRGTPDAVLLVEF
                     AEAEWEDNLRRIEALAALMGDLGYAWDKTSSKQGGVIKVLDPKLQAAITDVRTAGLNI
                     MMSMKEEGKPISFVEDCAVPLEHLAEYTERLTRVFERHGTRGTWYAHASVGCLHVRPV
                     LNLRLDKDKQAMRAIAEEAFAFVREYKGSHSGEHGDGLVRSEFHEPMFGTRLVRAFEE
                     VKDRFDPRHLFNPGKIVRAPKFDDRANFRFGPGYHGVPMAAALDWSSYPGIGGGFQGA
                     IEMCNNNGACRALAGGVMCPSYRVTRDEKDVTRGRANTLRLAVTGQLGPDAFTSDAMA
                     ETMKLCVSCKACRRECPTGVDMARMKIEVMAARAAKHGLSLHSWLVGYLPRYAPVAAR
                     LAWLLNLRDVLPGAAALSERIADFSARRSLPRWRSDWFRGSSPSPHGKGEQKDGDIVL
                     FADTFNRYFEPENLHAAVKVLRAGGYRVQVATPADGSSRPLCCGRTFLAVGKVDEARQ
                     EVERTIATLEPLAARGLPIVGLEPSCIFSFRDEIPALMKDGRAPLIADRAILFEEFLS
                     REASASRLELPLAPLGTQVLLHGHCHQKAFGAMGAVETALKLIPDLKVEPIESSCCGM
                     AGSFGYHAETIDVSLAMAEMSLLPTLREAPADSLIVADGTSCRHQIKDGTGREAMHVA
                     RVLAHSIRA"
     gene            5554..6561
                     /locus_tag="VLJ17_23015"
     CDS             5554..6561
                     /locus_tag="VLJ17_23015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011996140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSV25885.1"
                     /translation="MANISNRLRLYGGATLAVLALGAPAHAWEPTKPVEIVVAAGAGG
                     ASDQMARMLQAAVQKNGLMKQPLVVSLKGGASGAEGLMYMKAGQGDPNRFIIAYSLIY
                     TLPLSAKIPFDWRELTPVSIVAFDQFGLWVNSAKPYKTVKEFTDAAKTASPTFKMGGT
                     GSKREDQILTAFIEKRTGAKFNYLPYKSGGEAATQLVGNHIESNVNNPSENAEVWRAG
                     QVRALCIFDHERIEYTAKVTPDMSWADIPTCKEQGLDVQYTMLRGIFLPGKVAPDAAA
                     FYIDLFRKVTNTAEYKDYMEKQALKPSFLTGPDMVKFLEQDEALHKQLMTEAGFVATT
                     N"
     gene            6698..7219
                     /locus_tag="VLJ17_23020"
     CDS             6698..7219
                     /locus_tag="VLJ17_23020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015665553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HSV25886.1"
                     /translation="MPQSPPSPAPEDDRPIAKSRNVDIVLLLGLLALACLLGWDSARV
                     GNAWADDGPQAGYFPFYLSVLLGAACLIGLARLLMWSSHSTTGFINRHQLVRVTQVFV
                     PTLVFVIMTEFLGLYVASFLLVAGFMWWIGRMALWKSVLTSFLFAAAMFLTFEIAFNV
                     IMPKGPLEAAFGF"
     gene            7242..>7490
                     /locus_tag="VLJ17_23025"
     CDS             7242..>7490
                     /locus_tag="VLJ17_23025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015665554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HSV25887.1"
                     /translation="MEAFELLLQGFLTLMTVQKLALMMVGLILGVFVGVLPGLGGPNG
                     VAILLPLTFSMDPTSAIVMLSCLYWGALFGGAITSILFN"
BASE COUNT         1469 a         2272 c         2224 g         1525 t
ORIGIN      
        1 tcgtcggtat tgagcccaat ccaagggtgc gccaccgcgg gccgcccatc tgcgatgaga
       61 tcggcgagga tcggcgccag gcgatcaatc ggaacaaaca tgttgccgcg caccccatcg
      121 ccctttccgg acgtgtcacc gacaacgagc gaaccaacgc cgaccaactt gccatcatgg
      181 ctgatcaatg ctgcgccgct ccaagccggg tgcggcggcg cagtgaaaat cgcctcgtcc
      241 agcagatatt cccaattgcc ggcaaattcc cgcttggcca ccacatgaac aggcgccaca
      301 ccgctctggc caccatagct cgcgatcacc accgggtcgc ccactttgat ctcggaagcc
      361 ttgcccattt gcagggcgcg cactttcaga ggcgtgatcg tctgcagcaa tccgaacccg
      421 gattcgttgt catatcccac ggcgttggcc gccacggtgc ggccgtcgtt ggtggtgatc
      481 tcggctgaaa ttgcctccac catgagatac ccgatggtaa ggatgagccc attgttatcg
      541 ataacgatgc cgctcccctc gcgctcatgt cccaggtttt ccgtagtacg cccgtcagga
      601 gtgatgaatg tcttgatgtg aacgacgccg gaaagcaatt gatcaagtgt gggagactga
      661 gcctgagcca caatattggg cgaaacaacc agcataatac ctaagagtaa cgtgcaagtg
      721 tacataacca caactgaacc aagaaaactc cgcatgtctg cctcctttag acagctgcag
      781 tcatgcatag attataccat ttctacttcg aataagtatc acatcctcgt caagcccatc
      841 atcagggctg ttcaacgctc tatactgagt ctggaatgca acagtgactg aggatttgag
      901 gcgtggggat tccagcgaga gaaaagttct gagtctatga cggcctccac attgaggagc
      961 ccatcatgct ccccgccaat acttcgcaat tcgaggtcgc ccgataccaa tccagcgcgc
     1021 ttttatacgc gcagacttta gaaccggcac caatttaacg aatcagtgca cgtttttctg
     1081 atcgcccaat gcgaaaaagt tcggattgaa ctgcagggag atccgtcccc cgcggccaat
     1141 gaacccgtca ctccgctgcg gcacgctgtg gatcagcatg agccgacact atgtaatcca
     1201 tcgcagcctg cacgccgccc ttccggatcg ggacaccggc caacgtaagc gccatttcgg
     1261 ttccggcgag cgcgcccaga atcgtcagat cgttggtgtc gcccaaatgg ccgatacgga
     1321 aatatttccc ggccaatttg ccgaagctca tgccgtagga aatatcgaaa tgatcaagcg
     1381 cgaggtcgcg cagctggtcg gcattgtgcc cctccggcaa cagcaccgcc gtcaccgtcg
     1441 gcgagtaata tttcggatcg cggcacagga tttcgagacc ccaggcaccc accgcacgcc
     1501 gggtcgcctc ggcgaaccga gcatggcggc taaacacatt gtcgagtccc tcctcgtgca
     1561 gcatatcgat cgcggccgcg agaccatgca gcatgttggt ggccggcgtg tacggaaaca
     1621 agccaagcct gttcatgttc agcatgtcct cccacgacca gaacgacttc ggcagattgg
     1681 aagttttgga tgcagcgatc gccttctcgc tcaaagcgtt gaacgacatc ccgggcggca
     1741 gcatcaggcc cttctgggca ccaccgatcg tgacgtcgac gccccattcg tcatggcggt
     1801 agtcggtcga ggcgagtgac gaaatggtgt cgaccatgag cagtgccgga tggccgaccc
     1861 gatcgatggc ctgacggatt tccacgatcg gagacaagca gccggtcgcg gtctcgttgt
     1921 gcaggacaca gacggcctta atctcgtgcg ctttgtcttc cttgagcttc gcctcaattg
     1981 tcgtcggatc ggcgccgatg cgccaatcgg ttggaatgaa ttccggcctt aggccgagct
     2041 ttcccgccat atttttccat aacgcagcga actggccggt ctccaccatc aatacccggt
     2101 cacccgcgga cagggtattg accagcgctg cctcccacgc ccctgtcccg gtcgccgtgt
     2161 agatgatgac cggattggtg gtcttgaaga tggttttgat gccatccagt acgcgcttcg
     2221 ccagcttgat gaattcggga ccacgatgat cgatgatcgg ggtgtccatc gcgcgcagaa
     2281 cgcgatccgg caagggcgtt ggcccaggaa tctgcagaaa atgacggcca gcggtacgcg
     2341 acgaattctt ggacatgcgg tttatcggcc ttagtttcgg aacttccccg aacttgggaa
     2401 gaatgcaaga gtcagtcaag tccgttgagg accggatcgg tgggcagggc cccccagtca
     2461 atggcggtaa acgcaatatg acggtagtgg cggcgcccgg gctggaacgt cggctcaggg
     2521 cagaggtcag cggcgacgta tggttcgatc gcttcacgcg gggccggtat gccaccgacg
     2581 cttcccatta ccagatgatg ccggtcggcg tggtggcgcc gcggtctgtt gcggaggccg
     2641 agcgcgccat cgcattggcg cgggccgacg gcgtgacggt gctgccgcgt ggcggcggga
     2701 cgtcgcagag cggccagacc gtcaatcatt ccctggtgct cgattgttcg aaatatctca
     2761 accgagtcct cgatctcgat gtggccggcc ggcgttgtgt cgtcgagccc ggcattgtgc
     2821 tcgatgagct caatcgcaag ctcaagcctc atggattgtg gttcccggtc gatatttcca
     2881 ccgcctcacg cgcaactatc ggcgggatgg cgggcaacaa ctcctgcggg gcgcggtcgc
     2941 tgcgctacgg tgtcacccgc gacaacgtgc tgtcgatcga tgccgttctg gcggatggat
     3001 cggccgcgca cttcggaccg gtcggcgccg gactgcgcga tctgccggtt ggctcgccgc
     3061 tacggctgct agccgaggac ttactcgcga tcggggtgcg cgaatccgac gagatcgcgg
     3121 tgcgatttcc caaggtgcag cgccgtgtcg gcggctacaa tctggatgcg ctggctccca
     3181 atgctccggc tcacaacctc gctcatatcc tggtcggatc tgagggcacg ctcggtttct
     3241 cgaccaagat tgaactcaag ctgtggccgc tgctgggacg ccgcgcggtc ggtgcttgcc
     3301 attttggccg tttttacgac gcgatggatg cggctcagca catcgtcaag ctcaaaccta
     3361 ttgcggtcga gctgatcgat cgcaccatga tagagctcgc ccgcaacatc gacatgttcg
     3421 gccccaccat cgacgccttt gtgcgcggca cgcccgatgc tgtgttgctg gtcgagttcg
     3481 cagaggccga atgggaggac aatctacgtc gcatcgaggc cctcgcagcc ctgatgggcg
     3541 accttggcta tgcttgggac aaaaccagct ccaaacaagg cggcgtaatc aaggtcctcg
     3601 acccaaaact tcaggccgcc attacggacg tccgtaccgc aggtctcaac atcatgatgt
     3661 ccatgaagga ggagggcaaa ccgatctcct tcgtggagga ctgcgcggtg ccgttggagc
     3721 atcttgccga gtataccgag cgcctcacgc gggtgttcga gagacacggc acccgcggca
     3781 cctggtatgc ccatgcgtca gtcggctgcc tgcacgtgcg tcctgtgctc aatctgcggc
     3841 ttgacaagga caagcaggcg atgcgcgcga tcgccgagga ggccttcgcc ttcgtacgcg
     3901 aatacaaggg ctcccattcg ggagagcatg gcgacgggct ggttcgctcg gaattccatg
     3961 aaccgatgtt cggcacacgc ctggtgcgcg cgttcgagga ggtgaaggac cgcttcgatc
     4021 cgcgccatct gtttaatcca ggcaagatcg tacgcgcgcc taagttcgac gatcgcgcca
     4081 atttccgctt cggccccggc tatcatggcg tcccgatggc ggcagcgctc gactggtcgt
     4141 cctatccggg gatcggcggc ggtttccaag gcgccatcga gatgtgcaac aacaacggcg
     4201 cctgtcgggc gctagctggc ggcgtcatgt gcccgtctta tcgcgtaacc cgcgacgaga
     4261 aggacgtcac ccgaggccgc gccaacacgt tgcggctcgc cgtcacgggt cagctgggcc
     4321 ccgacgcttt cacatcggac gccatggcgg agaccatgaa gctctgcgtc tcctgcaagg
     4381 cgtgccggcg tgaatgcccg accggcgtcg acatggcacg catgaagatt gaggtcatgg
     4441 cggcacgagc ggcaaagcac ggcctttcgc tacatagctg gctggtcggc tacttacccc
     4501 gttatgcccc ggtggcagct cggctagctt ggctgctcaa cttgcgcgat gtcctgcctg
     4561 gcgcggccgc actgtcggag cgcattgcgg acttttcggc tcgccgcagt ctgccgcgct
     4621 ggcgcagcga ctggtttcgg ggttcttctc cctcgccgca cgggaaaggg gagcaaaagg
     4681 atggcgacat cgttctcttt gccgacacct tcaatcgcta tttcgagcca gaaaatcttc
     4741 acgcggccgt gaaagtcctg cgtgcgggcg gttatcgcgt gcaagtcgcg acgccggcgg
     4801 acggctcctc gcgaccgctc tgttgcgggc ggacgttcct ggcggtcggc aaggtagacg
     4861 aggcacggca agaggtcgaa cgaacgatcg cgactctcga acctttggcc gcacgcggcc
     4921 tgccgatcgt tggacttgaa ccgagctgta ttttttcgtt tcgcgacgaa atccccgcct
     4981 tgatgaagga cggacgcgcc ccgcttattg cggatcgcgc catcttgttc gaggagtttt
     5041 tgtcacgcga agctagtgcg agccgacttg agctgccact ggcgccgcta ggaacccaag
     5101 tcctgctgca tggccattgt caccaaaagg cattcggcgc tatgggagcg gtcgagacgg
     5161 cgctgaaact cattcccgac ctcaaggtcg agccgatcga atcgagttgc tgcggcatgg
     5221 ccggcagctt cggctatcac gcggagacca tcgacgtttc tctcgccatg gccgaaatgt
     5281 cgctgttgcc gacgttgcga gaagcgcccg ccgatagcct catcgtggcc gacggcacgt
     5341 cctgccgtca ccagatcaag gacggcaccg gccgtgaagc catgcatgtc gcgcgcgtcc
     5401 ttgcacacag catccgtgca tagcgagccc gcccctgctg gcttcgcgct gcgtcggttt
     5461 tgcgcttgaa tgggctgcac aaacgcgcaa aatgtcgcat gaataggaat gcccaccgta
     5521 ggtcggcatc ggaggaatgc caaggagacg aaaatggcaa acatcagcaa tcgtttgcgt
     5581 ttatacggcg gcgccacgtt ggcggttcta gcgctgggcg caccggcaca cgcctgggag
     5641 cccaccaagc cggtcgaaat cgtggtcgcg gcgggtgctg gcggtgcctc cgatcaaatg
     5701 gcgcgcatgc ttcaagcggc ggtgcaaaaa aatggcctga tgaagcagcc actggtggta
     5761 tccctcaaag gcggggcctc gggcgccgaa ggcctgatgt acatgaaggc cggccaaggt
     5821 gacccgaacc gcttcatcat cgcgtattcg ctgatctaca ccttgccact gtcggcaaaa
     5881 atcccgttcg attggcgcga actgactccg gtctccatcg tggctttcga tcagttcggc
     5941 ttatgggtga attctgccaa gccctacaag accgtcaagg aatttaccga cgccgccaag
     6001 acggcatccc ccactttcaa gatgggcggc accgggtcga aacgggagga ccagatcctg
     6061 accgcattca tcgaaaagcg gaccggagcc aagttcaact accttccgta taaatccggc
     6121 ggtgaagccg ccacccagct ggtcggcaac catattgaat ccaacgtcaa caatccgtcg
     6181 gagaacgcgg aagtctggcg cgccggacag gtgagggcgc tatgcatctt tgatcacgag
     6241 cgcatcgaat acaccgcgaa ggttacgccc gacatgtcat gggctgacat tccaacctgc
     6301 aaggagcagg ggctcgacgt acaatacact atgttgcgcg gcatcttcct gcctggcaag
     6361 gtcgccccag acgccgcggc tttctatatc gacctgttcc gcaaagtcac taacaccgcc
     6421 gagtacaagg actacatgga gaagcaggcc ttgaaaccga gtttcctcac cggtcccgac
     6481 atggtgaagt tccttgaaca ggacgaagcc ctgcacaagc agctgatgac cgaagcgggc
     6541 tttgtggcga caacgaactg agttcccacg atcattgtgg cgaagattgc gtcctcgaaa
     6601 ttcggactgg ttgagtgaag cgaacccatc ggggttttgc cctgcggcat ggtcgatgat
     6661 cgacgcacca aaatgaaccc cttgcccggt tgagcccatg ccgcaatcgc ccccctcacc
     6721 agcgccggaa gacgatcgac cgattgcgaa atcccgcaac gtcgacatcg tgcttttgct
     6781 tgggctgctg gcgctcgcct gtctactcgg gtgggacagc gcgcgggtgg gcaatgcatg
     6841 ggccgatgac ggcccgcagg caggttattt cccattctat ctgtcggtgc tgttgggagc
     6901 cgcctgcctg attggattgg ctcgcctgtt gatgtggtcc agccattcca cgacagggtt
     6961 catcaaccga catcagttgg tccgggtgac gcaggtgttc gtgccgacgc tcgtcttcgt
     7021 catcatgacc gaatttctcg ggctctacgt ggcaagcttt ctgttggtcg ccggtttcat
     7081 gtggtggatc ggccgcatgg cattgtggaa atcggtgctt accagtttcc tgtttgccgc
     7141 tgcgatgttt ctcaccttcg agatcgcctt taacgtgatc atgccgaaag gaccgcttga
     7201 agcggccttc ggattttagg agaggtcggc gaggaaatcc gatggaggcg tttgaactgt
     7261 tgcttcaggg attcctgacc ctgatgactg tgcaaaaact cgccctgatg atggtcgggc
     7321 tcatcctcgg cgtcttcgtc ggcgtgttgc ccggcctcgg cggccctaat ggcgttgcca
     7381 tcctgctgcc gctgaccttc tcgatggacc cgacctccgc catcgtgatg ctgtcctgcc
     7441 tctattgggg ggcgctgttt ggcggtgcca tcacgtcgat cctgttcaac
//
LOCUS       DATILV010000957         4794 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1773615, whole genome shotgun sequence.
ACCESSION   DATILV010000957 DATILV010000000
VERSION     DATILV010000957.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4794)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4794)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4794
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1773615"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..545)
                     /locus_tag="VLJ17_23030"
     CDS             complement(<1..545)
                     /locus_tag="VLJ17_23030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010685261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HSV25888.1"
                     /translation="MFAVALVSTGLGLFAGHRSLTPAAGKEPRFPQLTMAQLNDEQRP
                     LGEAIIKISSVGIAGPYNPMLRSPVFGQRMFDLLDYLRWHSSVPPRLNEFAILITGRL
                     WRSQVEWYAHGPLALKAGLSPMIIADLKANKRPATMQPDEAAVYDFVMELSTRHEVSD
                     ETFARARMLLGEQQVVDLTAVT"
     gene            841..1017
                     /locus_tag="VLJ17_23035"
     CDS             841..1017
                     /locus_tag="VLJ17_23035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp family type IVb pilin"
                     /protein_id="HSV25889.1"
                     /translation="MQALIKQFANDESGATAIEYGLIAAGISVAIITAVMTLGTQLNA
                     TFNTVNTQLASASK"
     gene            1530..1796
                     /locus_tag="VLJ17_23040"
     CDS             1530..1796
                     /locus_tag="VLJ17_23040"
                     /inference="COORDINATES: protein motif:HMM:NF013540.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSV25890.1"
                     /translation="MIRGRRKALNMRQDQLALATGVGRRFLIELEAGKPTCQLGRSLL
                     VAEALGFTPADMLAWRDPSATAAADLPDLPDAMEEPDGRSAGIF"
     gene            1771..3108
                     /locus_tag="VLJ17_23045"
     CDS             1771..3108
                     /locus_tag="VLJ17_23045"
                     /inference="COORDINATES: protein motif:HMM:NF019421.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HipA family
                     toxin"
                     /protein_id="HSV25891.1"
                     /translation="MAGLPVYFEQRLVGAIDVDKSGPGFTYDSGWIGLRGAFPISTRM
                     PLTPDRIGSDVFLPWAANLLPENEQLRTLGQLLGMARGDVIGLLSAIGGDTAGALSIG
                     QPGRTSSVQWRPVGTPDELEGVLEDLPNKPFLVGEEGVSMSLAGAQSKLAVAVDECGR
                     ICIPMNGSPSTHILKPDSPRLPGGVQNEAFCLTLARRMKIPAPNVDTGTAGKRTFLLV
                     KRFDRTDVGGRWRRLHQEDYCQALGMPPSAKYESNQTGIRGPTLKDMFDVTRRHLPAT
                     DIIRLLDMVVVNVLSCNTDAHAKNYAIIIRGNGASLAPMYDIMCGEVWGNVTKNFAQK
                     IAGKGRGDDLTGRDWQRFARECGLNPRQVIDRIGTLAKLALAEAEAAASEVAAMPAGP
                     HEVLEPTREAVERRARMLLAQLQEPGNDTTGKAPNVDSRSTQPESELEGSKAT"
     gene            3715..4101
                     /locus_tag="VLJ17_23050"
     CDS             3715..4101
                     /locus_tag="VLJ17_23050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25892.1"
                     /translation="MADVIFPKRAPLPRELDTRPKLDDYRPKKVRMRASSDVNVENYQ
                     TDELDEQNYSEASTEMSSQVNLHKLEHDLSRNPLNEIATMMRALTYGEMMELAQAIWK
                     IRSEGEGVDQDSLPMLLHRWSTSSEH"
BASE COUNT         1067 a         1296 c         1382 g         1049 t
ORIGIN      
        1 gtcaccgccg tcaggtcgac cacctgttgc tcgccgagta gcatcctggc gcgcgcgaat
       61 gtctcatccg aaacttcatg cctggttgag agctccatga cgaaatcgta gaccgcggct
      121 tcatccggct gcatggtggc cggccgcttg ttggccttaa gatcggcaat gatcatcggc
      181 gacagccccg ctttgagcgc gagcgggcca tgtgcgtacc attcgacttg cgagcgccac
      241 agccggccgg tgatgaggat ggcaaactca ttgagccgcg gcggcaccga ggaatgccag
      301 cgcagatagt caagcagatc gaacatgcgc tgtccgaata ccgggctccg cagcatcgga
      361 ttataaggac cagcgatacc tacgctcgaa atcttaatta tggcttcccc gagtggacgt
      421 tgctcgtcgt ttagctgtgc catggttagt tgcggaaagc gtggttcctt gccggccgcc
      481 ggcgttaatg agcgatgacc tgcgaacaat ccaaggccgg tcgacacgag ggcgaccgcg
      541 aacatgcagc tcagcttacg ggttttgatc attgagcatt ccccctttgt gtcttgtggc
      601 gtttttcttg tggcatacca gattaccgac gtgggcgcca tctccaacca agtggggcgt
      661 aggtcgacgc caaaaaagcg cgatagaggc ttggatagat gacccatcag taaacgtaaa
      721 accccctctt cgttaaattt attcgaagtg aattaggtgg tctccaacat cttgttgata
      781 ggaatacatc tgccaccaat ttccggccct gcagggggcg aagaaaacag gagtaacctg
      841 atgcaagcac tcattaagca gttcgcaaat gacgagtccg gtgcgaccgc catcgaatat
      901 ggattgatcg ccgccggtat ctcggtggcc atcatcaccg ccgtgatgac cctcggcacg
      961 cagttgaatg cgaccttcaa caccgtgaat acccagctcg cctcggccag caagtaagcg
     1021 gattccctga tcgaaaacgt cgggggcgac gttttcgatg atgcccgtat tggctccgtt
     1081 cgatttgttc cggcgcgatt atcgatcgcg gcataagcgc ttttagcgtc cgtccggaag
     1141 gaaacgtgcg ttgtcatgcc ctgcgaaagc ggggcatccg gtatccccag cttcatgggc
     1201 ttatgcccaa tcgaaatcgg ggtggttact ggaccgcccg cccccgccta cgcgaggaca
     1261 agcttcgcgc gcggtgacat gcctttttta agcaatcatt cccgaacaaa tccttggttt
     1321 gcccacgcag gcccctccgg ggttcccgat caggcacttt tagccgcaaa aacgaccatt
     1381 cgaccgcaaa tgttccccgg cgggaacatt tcattaactt tcgatcgatt acaatgaaat
     1441 attccctacc gggtacgtgg tgacacatgg aaagcgatga aaactcgatt aaccgaagag
     1501 cctcggggac cgcatcggca tttggatcga tgatccgcgg ccgacgaaag gctctgaata
     1561 tgcgccagga tcagctcgcc ctggcgacag gcgtcgggcg cagattcttg atcgaactgg
     1621 aagccggcaa gccgacctgt caactcgggc gaagtcttct ggtggccgaa gccctcggtt
     1681 tcacgcctgc tgacatgctg gcttggcgcg acccgtccgc caccgcggcg gcggatttgc
     1741 ctgacctgcc agacgcgatg gaggaaccgg atggccggtc tgccggtata ttttgagcaa
     1801 cggctcgtcg gcgcaattga tgtcgacaaa agcgggcccg gatttactta tgactcgggt
     1861 tggatcgggt tgcgaggtgc gtttccgatt tcgacaagga tgccgctgac acccgatcgc
     1921 atcgggtctg acgttttcct gccctgggcc gcaaacctct tgccggaaaa cgaacaactg
     1981 cgaacgcttg ggcaacttct cgggatggcg cgcggcgatg tcatcgggct gttgtccgcc
     2041 atcggggggg acacggcggg cgcgttgtca attgggcagc ctgggcgaac gtcttcggtg
     2101 caatggcgac cggtcggaac gcctgacgaa cttgaaggtg ttttggagga cttaccgaac
     2161 aagccgttcc tcgtcggtga ggagggggtc tcgatgtcgc tcgcaggcgc ccaatcaaag
     2221 cttgcggtgg cggtcgacga gtgcggccgc atctgcattc cgatgaatgg ttctccttca
     2281 acgcacatcc tcaagccgga ctcgccgcgt ctaccaggcg gcgttcagaa cgaggccttc
     2341 tgtctgacat tggcgcgccg catgaagatc ccggcaccga atgtcgacac cggcacagcc
     2401 ggcaagcgaa ctttcttgtt ggtgaagcga ttcgatcgaa ccgatgtggg tggtcgttgg
     2461 cgccgtctgc atcaggagga ttattgtcag gcgctcggga tgccgccatc cgccaagtat
     2521 gagtccaatc agactggaat tcgcggaccg accctaaagg atatgtttga cgtgacccgg
     2581 cggcatttgc cggcgaccga cattattcga ttgctcgata tggttgtggt caatgtccta
     2641 tcctgcaaca ccgatgcaca tgccaagaac tacgcgatca taatccgcgg caatggtgca
     2701 tcgctcgcac cgatgtacga cattatgtgc ggcgaggttt ggggaaacgt tacgaagaat
     2761 ttcgctcaga agatcgccgg caaaggccgg ggagatgatc tcacgggaag ggactggcag
     2821 cgcttcgcac gcgaatgcgg cctcaatccc aggcaggtca tcgaccgcat cggcacgctc
     2881 gcaaagttgg cccttgcgga agccgaggcg gctgcatccg aggtcgccgc tatgccggct
     2941 ggtccccacg aagtcttaga gccgacgcgg gaagccgtcg aacgacgggc gcgtatgctg
     3001 ctggcgcaac tacaggagcc ggggaatgat acgactggta aagcccccaa cgtagactca
     3061 cggtctaccc agccagagtc tgagttggaa ggcagcaagg cgacatgatg ccgttcgggt
     3121 ggtcgaccaa ggtcaattga cattgcggat gttcgaaaga cggtctcttt cttttaagcg
     3181 acaagatcga aaaattgggc acttactcat gcaaccgacg gtggtatcat taaccctttc
     3241 cagctaaaag tactttacat tttggacggt aacgcaataa taccgtattc ggggagtcgg
     3301 gaatcatcta aatagggtcg ttcgatctgg aagtcgccgc gtgacttgta cgtttgattt
     3361 cgcgccaagc aaggcaaggc gtttcaagat ttggatgcgg gccagcgcaa tattttgcgc
     3421 tggcggggtg cttattgccg ccaccgcgca tctgctgcat tccccgataa atgacacgtt
     3481 aggaattgca aacgtgcaaa atcgcgtgac aattcctccg tctgcatcga ttttgttgtt
     3541 aggtaccggt gaacttggtg ccgaacgacg ctagatgtcg aacagccgga tcagtccgcc
     3601 gcaccggtta ggtacaggcg tggacaattt gctcgcaatt tcgcggtgaa ttgcaaggca
     3661 agaaaggaat gaggccaaag actggggatt tactcaagcc gacggagaaa ctatatggct
     3721 gatgtcatat ttccgaaacg agcgccgttg ccgcgcgaac tcgatacgcg cccgaaactg
     3781 gacgactacc gtccgaaaaa agtgcgtatg cgcgcttcaa gcgatgtgaa cgtcgagaat
     3841 tatcaaaccg acgaactcga tgaacaaaat tattcggaag cctcgaccga gatgtcgagc
     3901 caagtcaatt tgcacaagct tgaacatgat ttaagccgca atccattaaa tgaaatcgca
     3961 acgatgatgc gagccctcac ttacggagaa atgatggaac tcgcgcaagc gatttggaaa
     4021 atcagatcgg aaggggaggg cgttgatcag gacagcttgc ccatgttgct gcaccgctgg
     4081 tcgacatctt ccgaacactg acatttgggg ccgcgcgggc cctgcgccgt cagacatctg
     4141 tgctgggtgg tatcgccact cgttgtcaca tggccgctgt cgaaaagcgc caccgttagg
     4201 acagcttgag attgttgtta agcttgatta caatcaagga cattaaaacg gcgttttgtt
     4261 gcaatcagaa atttataatg caataatttt tgctgtcctg gaaggttttt gttgcacgat
     4321 caagttatga aggttagctc cgatcatgtg ttgttcgctt gccctcattg cgggacggtg
     4381 atgcgctttt tcgagtcatt tccggctcag agtgggttac ccgaagtaga tgtgttcgcg
     4441 tgcgatgcgt gcgagcacat gattctgcaa gatcgcgtac gattttccac ttcccccgct
     4501 gccaaatcgt agtcgtgacg tcgtcacgcg tttgctggcc agcacggctc atcatcttat
     4561 gtcgcaatgg ccttgcgacc gaccattcgc ccgtcgcgac ccaaaggcat cggtgccgtg
     4621 acgctcgaag cctacctcat ggtgctggcg ttcgatttga ttatagtcga gagccccaaa
     4681 aggctagtcg ccatgaaacc ggagtatcgg aaccgcgtga tcgagcagac tcgggccggt
     4741 cacacgctct cgaaggtcgc catcagtcgg atcatgaaga tgctaagcga gcgg
//
LOCUS       DATILV010000958         1607 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_5088871, whole genome shotgun sequence.
ACCESSION   DATILV010000958 DATILV010000000
VERSION     DATILV010000958.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1607
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5088871"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            133..942
                     /locus_tag="VLJ17_23055"
     CDS             133..942
                     /locus_tag="VLJ17_23055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25893.1"
                     /translation="MEGDWHETDFLVLAAGARNQLVPETRALQRDELEMTQGYFVPQT
                     SDSITIKFLPHFEGYIWSFPRCDHLSVGICGSMSSHTSMELRGHLQTFVEKHGIQTEA
                     AKFYSHVLPSPKERTLSERTVIGKNWALVGDAAAWVDPLTGEGLFYAIRSGELLGRSL
                     AEGCPEKYPAWIKATFCAELEFAARIVRRFYRGSFLGSAVTTRMVQFMRRSPVFRQLM
                     GDLFSGTQDYTSLKRRLWGHLGITVSEFISSVLNLDRPARASVSRAGTAGD"
     gene            1033..>1607
                     /locus_tag="VLJ17_23060"
     CDS             1033..>1607
                     /locus_tag="VLJ17_23060"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV25894.1"
                     /translation="MATETASKSPAKSEKRRNAWKSLPDVWALMKPRRGLLALGFVLM
                     AINRLSGLVLPASTKYLIDNVIGKKQIQLLTPIVLGVLTATVIQGLTSFTLTQLLSKS
                     AQKMIAELRRQVQAHIGRLPVSFYDANKTGALVSRIMSDVEGVRNLIGTGLVEFVGGL
                     MTAVIALVILIRTSVTMTGVAFGILLVFGYG"
BASE COUNT          316 a          456 c          481 g          354 t
ORIGIN      
        1 catccgatcg tgatttattc acgcacggtg ctcaacggtt tgctcctgga tcgagctcgc
       61 gaggcgggtt gcgacgtgca ccaatctcgc gtgatgagcg tggacaccac cacggcgaag
      121 ccacgctatt gcgtggaagg cgattggcat gagactgatt ttctggttct cgccgccggg
      181 gcgcgcaatc agctagtgcc ggagacgcgg gcattgcaac gcgacgaact ggaaatgacg
      241 cagggttact tcgtgccgca gaccagcgac tccatcacca tcaagttcct gccgcacttt
      301 gagggctata tctggtcgtt cccgcgctgt gatcatcttt cggtgggcat ttgcggcagc
      361 atgtcgtcgc acacaagcat ggaactgcgc ggccacctgc agacttttgt ggagaaacac
      421 ggcatccaga cggaagccgc aaagttttac agccacgtgc tgccttcgcc gaaagaacgc
      481 accctatcgg agcgaaccgt cattggaaag aactgggcgc tggtcggaga tgcggcggcc
      541 tgggttgatc ctctcactgg cgaggggctc ttctacgcga ttcgctcggg cgaattattg
      601 ggccgctctc tcgcggaagg ctgccccgag aagtacccgg cttggatcaa ggctacgttt
      661 tgcgccgaat tggagttcgc ggcccgcatc gtgcggcgtt tctatcgcgg atctttcctg
      721 ggcagtgcgg tgacgactcg catggttcag ttcatgcggc gaagcccggt gttccgccag
      781 ttgatgggcg acctcttcag cggcacgcag gattacacca gcctgaagcg gagactatgg
      841 ggccatctgg ggatcaccgt cagcgagttc atttccagcg tcttgaatct tgaccggccc
      901 gcgcgggcga gcgtctctcg cgccgggacc gcgggcgatt aacgatagct cctccttccg
      961 atctggtttt gccatatagt tcatcgaaca ccgcacgcat ctaaatgtgg ggtacaattc
     1021 gttgctctaa tcatggccac agagacagca tccaaatcac ccgcaaagag tgaaaaacgc
     1081 aggaacgcct ggaaaagtct tcccgacgtc tgggcgctga tgaagccgag gcgcgggctg
     1141 ctggcgctgg gctttgtgct gatggctatt aaccgtctgt cgggactagt tttgccggct
     1201 tccacgaagt atctgataga caacgtcatc ggcaagaaac aaatccagtt gctgacgccg
     1261 attgtgcttg gcgttttgac cgcgactgtg attcaaggac tgacctcgtt cactctcact
     1321 caactgctct ccaaatccgc acaaaagatg atcgctgaac tgcggcgcca ggtgcaagcc
     1381 cacatcggcc ggcttccagt ctcattctac gatgccaata agaccggcgc gctcgtttcg
     1441 cggatcatga gcgacgtcga aggcgtccgc aatctgatcg gaacggggct ggtggagttt
     1501 gtcggggggc tgatgaccgc ggtcatcgcg ctcgttatct tgattcgtac cagcgtgacc
     1561 atgaccggcg tcgcgtttgg aatcctgctg gtcttcgggt acgggat
//
LOCUS       DATILV010000959        11055 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2280149, whole genome shotgun sequence.
ACCESSION   DATILV010000959 DATILV010000000
VERSION     DATILV010000959.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 11055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11055
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2280149"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..684
                     /locus_tag="VLJ17_23065"
     CDS             <1..684
                     /locus_tag="VLJ17_23065"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HSV25895.1"
                     /translation="STHLPHMLPSPEDFAAAAGKLGISDHDTIIAYDAHGMFSSPRVW
                     FTFRLFGADNVFILEGGLPKWKAEGHALESGTVAHPIKTFAARRRGDVVASLARVQQA
                     LASRSAQIVDARSAERFRGEAPEPRQGIRSGHMPGSYNVPSTSIVKDGLLLPRRQLEQ
                     AFAASGIDLDKPIITSCGSGVSAALLWLALDAIGSEPAALYDGSWAEWGAREDLPVAI
                     GPAVEKPRG"
     gene            complement(772..1533)
                     /locus_tag="VLJ17_23070"
     CDS             complement(772..1533)
                     /locus_tag="VLJ17_23070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010661065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HSV25896.1"
                     /translation="MSMGTGTTADHPAVEITGLHKWFGAFHVLADINLKVDRGERIVI
                     CGPSGSGKSTLLRCINRLEDFQRGDIVVNGMVLTHDVRRVDAIRREVGMVFQQFNLFP
                     HLTVLENCALAPIHVQGMPKREAEQRAMHFLARVKIPEQAEKYPAQLSGGQQQRVAIA
                     RALCMSPKLMMFDEPTSALDPEMVKEVLDTMVALALDGMTMLVVTHEMTFARQVANRI
                     VFMDAGEIIEINAPAPFFANPQHERTKLFLSQILH"
     gene            complement(1530..2714)
                     /locus_tag="VLJ17_23075"
     CDS             complement(1530..2714)
                     /locus_tag="VLJ17_23075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019965214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HSV25897.1"
                     /translation="MTATGASFGTDLPAQSGAVAFVRSVPAPAIAPPPATVGPLGWIR
                     ANLFSSVGSGMLTVLIAALCIWIILTLVDFLVVDAVWTGSDREACLATAARPNVGACW
                     AYIGDRFAYVIYGSYPIAGRWRVDVFFALLAFGTAWLLWLEAPRRDLGSIYFFAFLPV
                     ASFVLLHGFEPVGLAVVDTALWGGITVTIVVAAVGIVVSLPIGVVLALGRRSRLPAVR
                     LLSTLFIEFVRGVPLITVLFMASVMLPLFVPETWSPDKLVRALVGVALFSAAYMAEVV
                     RAGLESIPRGQYEAAHALGLSYWQSQRLIILPQALKVTIPNIVNSFIALFKDTTLVFF
                     VGIFDFLKTIEVARADPKWATPVTSATGYIFAALVYFVCCYAMSSYASSIEKRLETGE
                     KR"
     gene            complement(2711..3892)
                     /locus_tag="VLJ17_23080"
     CDS             complement(2711..3892)
                     /locus_tag="VLJ17_23080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HSV25898.1"
                     /translation="MELPRDALPRVPFYRDPKLRGLFLQALLCAAIGLLAYGAINNAA
                     DNLARAKIASGFGFWNLTAGFDISQTLIDYSSNTSTYGRAFWVGLLNTLLVAGLGIVF
                     ATIIGFTVGIARLSKNFLVERLATSYVELLRNVPLLLQLLFWYNAVLKALPEMAMSLA
                     LPGGFILNNRGLFMPRPLFASGGEILTVFAGTVTLATVFMIITGRSERLQGAFAVRVV
                     GVLMIVIGLPVTAFLATGAPLAFELPEVGRFNVRGGMEVLPELAALLFGLSIYTAAFI
                     AEVVRAGLMSVSRGQSEAAQALGLTRSQTLRLVVIPQAMRVIIPPLTNQYLNLTKNSS
                     LAVAIGYPDLVQIFSGTVLNQTNQAVEVVTITMAVYLSFSLFTSLVMNMYQSRFALYE
                     R"
     gene            complement(3916..4932)
                     /locus_tag="VLJ17_23085"
     CDS             complement(3916..4932)
                     /locus_tag="VLJ17_23085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HSV25899.1"
                     /translation="MKQIAQALFAAAVAFVVADTAAAATLDTVKQRGVLNCGANGQLP
                     GFGLPDSQGNWTGLDVDLCRAIAAAIFNDASKVKFVALTATNRFVALQTGDVDVLVRN
                     TTWTSSRDTQFGLNATGVNYYDGQGFMVRKSLKVNSALELNDAAVCVQQGTTTELNLA
                     DYFRANRMRLKSVTFATLDETLKAYETSRCDAFTTDASQLYSTRLKLAKAEDHVVLPE
                     IISKEPLGPFVRHGDDQWFDIVKWIHFAMLNAEELNVNRANLEEQMKSENPEIRRLLG
                     SEGNFGEQLGLSKDWVYRIVKQVGNYGETFERNVGQGSPLKIARGLNALWNKGGVQYA
                     PPIR"
     gene            5253..6509
                     /gene="metC"
                     /locus_tag="VLJ17_23090"
     CDS             5253..6509
                     /gene="metC"
                     /locus_tag="VLJ17_23090"
                     /EC_number="4.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004121 - cystathionine beta-lyase
                     activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-lyase"
                     /protein_id="HSV25900.1"
                     /translation="MTSKSGGNRDRDRKMSTRLANSGRDPFAHYGYVNTPVYHASTLL
                     FPSAQDYVAHRGRYQYGRRGTPTSEALETALADIEGPQCEAVALLPSGLAAISAALLS
                     VVRAGDHILVTDSAYGPTRKFCDTILPRYGVTTAYYDPTVGADIASLMHPNTVAVFLE
                     SPGSLSFEVQDVPAIAAAAHARNAVVLMDNTWASPIHFRALEKGVDLSIQSGTKYIGG
                     HSDVMLGVVASKKMAWMSLKETVFEMGLCVGPDDMFLGLRGLRTMGVRLAQHYAAGMK
                     VARYLEARPEILRVIHPALESHPGHAIWKRDFTGGCGLFSVIFKPAPVAAVYAFLNKL
                     TLFGIGASWGGFESLAIPFDCTPVRSATKWAPGGPAVRFHIGLEDVGDLIADLEEGFA
                     AFAATISECDTPETSDLSGNIVGKIK"
     gene            complement(6604..7098)
                     /locus_tag="VLJ17_23095"
     CDS             complement(6604..7098)
                     /locus_tag="VLJ17_23095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HSV25901.1"
                     /translation="MFKTIAAGAAALTLIAGASAYAQQSSVGSDFGWRHQFSAEDRAA
                     FLDARIAALHAGLRLTPEQEKAWPVFEQAYRDLAATRGDQTAAPRTEQSPDPVQRAQR
                     NAEVLTARSAALKRYADAMAPLYQSLDDNQKRRFGIFSRMERRFDRFSFWRSDDRGQF
                     RSPR"
     gene            complement(7234..7953)
                     /locus_tag="VLJ17_23100"
     CDS             complement(7234..7953)
                     /locus_tag="VLJ17_23100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018096574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV25902.1"
                     /translation="MTDGDQHVLIVDDEAQIRQFVRAGMELGGYRVTEAANGTDALRE
                     ITLHPIDLVILDLALPDFDGSELLERIRGWSGVPVIVLSVRAGEVEKVKLLELGADDY
                     VVKPFFMSELLARAKVVLRRQSERKDGESALRLDRLVIDFAARTVELDGKRLNLTPKE
                     YRLLQVLAQHPGKVITHQNLLKSVWGQAHVNNTQYLRIFVRKLRQKIEIDPNRPKILL
                     TELGVGYRLSDPATRDHARPE"
     gene            complement(7955..9520)
                     /locus_tag="VLJ17_23105"
     CDS             complement(7955..9520)
                     /locus_tag="VLJ17_23105"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV25903.1"
                     /translation="MLLLAKRYFHSGRIWVRKAMAPGGVTGVIMALVFVIVTNVFLLF
                     MRYIQELPPVALTFLIPIVVAAMLWGTLSAAITAIGGAATLTLFFYSPFYTTSADSRS
                     RVLGVVVFLVVSLVLGHLAAKTRRDAARALKRENEIRDLYTFSQRISSAQSPAGIFEA
                     MQQHLETVVGRRVLLFDSLGTLEAKSERLGDVEIPEAVTQAVSRLPATGIEGLKDIVV
                     DDHRGSAWLVRPVSTNTADFGIIAVDLGHPSEALDELRARVVALIGDAGLSLQRLGLA
                     RTISEARTRAETEQFREALIGSVSHELRTPLSSILGASTVLSLAPEITGDARLKKLTA
                     LIHQESERLNVEIQNILDASRISSNGLQAKLEWAEPADFINAALQRCRNRLTNRAVEV
                     TLPEELILLRIDSVLMERALGQILDNAAKYSPPESTITVWGYVESGQFMISVVDQGAG
                     LDADDRTLLGQKFFRGNRHSLLTSGLGLGFWIASAFVAANNGTIEATSDGVNKGMTVT
                     VRLPMPMKENHKD"
     gene            complement(9677..10006)
                     /locus_tag="VLJ17_23110"
     CDS             complement(9677..10006)
                     /locus_tag="VLJ17_23110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008915 - lipid-A-disaccharide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase N-terminal
                     domain-containing protein"
                     /protein_id="HSV25904.1"
                     /translation="MLVSLSQSVGDYLQNVFFLELNWGLLLGYAGQSLFGMRFIVQWL
                     ASERVGRSVMPVAFWFFSIGGGVLLLAYALYKRDPVFIIGQGLGLFVYLRNLYFVFRE
                     RKMALVS"
     gene            complement(9996..10763)
                     /locus_tag="VLJ17_23115"
     CDS             complement(9996..10763)
                     /locus_tag="VLJ17_23115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSV25905.1"
                     /translation="MTEDSRFPSGAAAPRISVVVPVRNEAGNIVPLIKEIVQALVTFA
                     PIEIIYVNDGSRDDTEAELRSAMKTCGFLRQIRHEVSCGQSAAVRSGVAAARATIVVT
                     LDGDGQNNPAFLPALVEALERDPMVGLVAGQRVGRKATGFKRLQSRIANGTRKAILHD
                     GTRDTGCGLKAFRREIFLALPYFDGLHRFLPALVRREGYRIAYVDVVDRPRLHGVSNY
                     GMWDRLWIGILDLAGVWWLIRRRKRVPIVSEVVCDAR"
BASE COUNT         2448 a         3311 c         3187 g         2109 t
ORIGIN      
        1 tcaacccatc tgcctcacat gctgccctcg cccgaggact tcgcggccgc agccggcaaa
       61 cttggcatca gcgatcacga caccattatc gcatatgacg cgcacgggat gttttcatcg
      121 ccgcgggtct ggttcacttt ccgcctgttc ggtgccgaca atgtctttat ccttgaaggc
      181 ggacttccga aatggaaagc cgaaggccat gcgctcgaga gcggaacggt tgcacatcca
      241 atcaagacct ttgcggcgcg caggcgcggc gatgttgtag cctcgttggc ccgagtccag
      301 caggcacttg cgtctcgcag cgctcaaatc gttgacgcac gatctgccga acggtttcgc
      361 ggcgaagcac ccgaaccgcg acaggggatc cgctccggcc atatgcccgg ctcgtacaac
      421 gtaccatcta cttcgatcgt gaaagacggt ctgctgctgc cgcgccgcca gctcgagcaa
      481 gcctttgcgg cgagcgggat cgacctcgac aagccgatta tcacaagctg tggctcgggc
      541 gtttcggccg cgctgctgtg gcttgccctt gacgccatcg gcagcgaacc ggcagcactt
      601 tatgatggct cctgggcgga atggggcgcg cgggaggatt tgccggtagc gattggacca
      661 gcggttgaga aaccacgagg gtgagcccgg acggggcggt agcgaaatcc gggactgcta
      721 tccaagcgga aagcgccgct cgcgggtttc gcttggcgct caacctacac gctaatgcaa
      781 tatctggctg agaaacagct tggtccgttc atgctgcgga ttggcgaaaa acggcgccgg
      841 cgcgttgatt tcgatgatct cgccagcatc catgaacacg atgcggttgg cgacctgccg
      901 ggcgaatgtc atttcatggg tgacgaccag catggtcatg ccgtcgagcg cgagcgccac
      961 catggtgtcg agcacttctt tgaccatttc ggggtcgagc gccgaggtcg gttcatcgaa
     1021 catcatcagc ttcgggctca tgcacagcgc ccgggcgatg gcaacgcgct gctgctgacc
     1081 gcccgaaagc tgggccggat atttttcggc ctgctcggga attttcacgc gcgcaagaaa
     1141 gtgcatcgcc cgttgctcgg cttcccgctt cggcatgccc tgcacgtgaa ttggggccag
     1201 cgcgcaattt tccagcacgg ttaggtgcgg aaacaggttg aattgctgaa ataccatccc
     1261 aacctcgcgt cggatggcgt cgacgcgccg gacgtcatgg gtgagcacca ttccgttgac
     1321 gacgatgtcg ccgcgctgga aatcttcaag ccggttgatg caacgcaaca gggtcgactt
     1381 gcccgacccg gacggtccac aaataacgat gcgctcaccg cgatcaacct tgagattgat
     1441 gtcggcgagt acatgaaacg cgccaaacca tttatgcaaa ccggtgatct ctacggccgg
     1501 gtgatcggct gtggtgccgg tgcccatgct catcgctttt ctcccgtctc gagtcttttc
     1561 tcgatgctgc tggcataact cgacattgcg taacagcaga cgaaatagac cagcgcggca
     1621 aagatatatc cggttgcgct cgtaactggc gtcgcccatt tgggatccgc gcgcgcgacc
     1681 tcaatggttt tgaggaagtc gaagatgccg acgaaaaata ccagcgtggt atccttgaat
     1741 agcgcgataa agctgttgac gatattaggg attgtcacct tgagcgcctg cggcagaatg
     1801 atgagacgct gcgactgcca ataggacagg ccgagcgcat gggcggcctc gtattggcct
     1861 ctgggaatgg actccaagcc agcgcgcacc acctcggcca tgtatgcagc agagaacagc
     1921 gccaccccga ccagcgcgcg cacaagctta tcgggcgacc aagtctccgg cacgaaaagc
     1981 gggagcatca cacttgccat gaacagaacc gtgatcaggg gcacgccacg gacaaactcg
     2041 atgaacaaag tcgacagcag ccggaccgcc ggcagccgcg aacgccgtcc taaagccaga
     2101 acaacgccaa tcggaagcga taccacgata cccacggccg caaccacgat agtcaccgtg
     2161 atgccgcccc acagcgccgt atcgacgaca gcaagtccga caggttcaaa gccgtgcagc
     2221 agcacaaatg aggcgaccgg cagaaaagcg aagaaataaa tcgagccgag atcgcggcgg
     2281 ggcgcttcaa gccacagcag ccacgcagtg ccgaacgcca gcagggcaaa gaatacgtcg
     2341 acccgccagc ggccggcgat cggataggag ccatagatca cataggcgaa gcgatccccg
     2401 atataggccc agcatgcgcc gacgtttggc cgcgccgcag ttgccagaca agcctcgcga
     2461 tccgatccgg tccacacggc atccacaacc agaaaatcaa ccagcgtcag gatgatccag
     2521 atacatagag ccgcgatcag taccgtcagc atgccgctgc caacgctgga aaatagattg
     2581 gccctgatcc agccgagcgg gccaacggtt gcgggcggcg gcgcgatcgc gggggctggc
     2641 acggagcgca caaaagcgac cgcgccggat tgcgctggca aatcggtgcc aaaggacgcg
     2701 ccggttgcag tcatcgctca tacaatgcga agcgcgattg atacatgttc atcaccagcg
     2761 aggtgaagag actgaagctc agatagaccg ccatagttat ggtcacgact tcaaccgctt
     2821 ggttagtctg gttaagtacg gttccgctga agatctgcac gagatccgga tagccaatag
     2881 cgacggcgag cgaagaattc ttggtcaaat tcaaatactg attggtgagc gggggaatga
     2941 taactctcat cgcctgggga atgacgacga gacgcagcgt ttgcgaccgg gtcaagccga
     3001 gagcctgcgc ggcttcggac tggccacgcg acaccgacat aagaccagca cgcacgacct
     3061 cggcaatgaa ggcggcggta tagatcgaaa ggccgaatag caatgctgcg agctcaggca
     3121 ggacttccat gccgccgcga acgttgaagc ggccgacctc cggaagctcg aatgcaagcg
     3181 gcgctcccgt cgccagaaag gccgtcaccg gcagcccaat cacgatcatg agtacgccga
     3241 cgaccctgac cgcaaacgct ccctgcaatc gctcgcttcg gcccgtgatg atcataaaaa
     3301 ctgtcgccaa cgtaacagtc cctgcaaaca ccgtcaaaat ttccccaccg ctggcaaata
     3361 gcggtcgggg catgaatagc cctcgattat tgagaatgaa gccgccgggc agcgccaggc
     3421 tcatggccat ttccggtagg gccttgagaa cggcattgta ccagaacaga agttgcagga
     3481 gcagcgggac gttgcgaagc aattcgacgt aggaggtggc caaccgctcc accaggaagt
     3541 tcttcgacag ccgcgcaatg ccgaccgtga agccgatgat ggtggcgaat acgatgccga
     3601 gcccggcaac cagaagggta ttgaggaggc caacccaaaa ggcgcggccg taagttgacg
     3661 tgttggagga ataatcgatc agtgtctgac tgatgtcgaa tccggccgtc aaattccaaa
     3721 agccgaaacc cgacgcgatc ttggcgcgcg cgagattatc cgccgcgtta ttaatcgccc
     3781 cataagccaa cagcccgatg gcggcgcaaa gcagggcctg caggaaaagt ccgcgcagtt
     3841 tcggatcgcg atagaacggc acacgcggca aggcgtcgcg cggcagttcc atcgcttagc
     3901 tccgatacct gagtatcagc ggatcggcgg cgcgtactgc accccaccct tgttccaaag
     3961 cgcgttgagg ccgcgggcga ttttgagcgg agagccttgg ccgacattgc gttcgaaggt
     4021 ttcgccgtag ttccccacct gcttgacgat gcggtaaacc cagtccttgc tcagtccaag
     4081 ttgctcaccg aagttccctt cactgccaag aagccgtctg atttcaggat tttctgattt
     4141 catctgctct tccagattgg ctcgattgac attgagctcc tcggcattga gcatcgcaaa
     4201 gtgtatccat ttgacgatat cgaaccattg gtcgtcgcca tgacgcacga agggtccaag
     4261 cggctctttg gagatgattt ccggcagcac cacatgatcc tccgctttgg cgagcttgag
     4321 ccgggtgctg taaagctgag aagcgtcggt cgtgaaggcg tcacatcggc tggtctcgta
     4381 cgccttcaag gtctcatcga gagttgcaaa tgtcaccgat ttgagccgca tgcgattggc
     4441 gcgaaaatag tccgcaagat tgagttctgt ggtggtgccc tgctgcacac agaccgcggc
     4501 gtcattgagt tcaagggccg aattgacttt caacgacttg cggaccatga acccttgccc
     4561 gtcgtagtag ttgacgccgg tggcattgag gccgaactga gtgtcgcgcg acgatgtcca
     4621 ggtggtgttg cgtaccaaaa catcgacatc gcccgtctga agcgcgacaa agcggttggt
     4681 ggccgtcagc gcaacgaatt tgaccttgct ggcatcattg aatatcgcag ctgcgatggc
     4741 gcggcaaagg tcgacgtcca acccggtcca gttgccctgg gaatcgggta agccaaagcc
     4801 ggggagctga ccgttggcgc cgcagttgag aacgccgcgt tgcttgaccg tatccagagt
     4861 tgcggcagcg gccgtatccg ccaccacgaa cgccacggcg gctgcgaaga gcgcctgggc
     4921 aatctgcttc atcttgaacc tccctgattt gaccctgatc gccactgatt tgaaagcctg
     4981 gcccgcggcg tcagaagctg agcgaccgcg gcggccggca atgaagcact ttgcgcccgg
     5041 cttttcatgc ccacatgctg ccgcagcttc cgatttttgc aatcccccaa tttatctaga
     5101 ggccggttgt ccattaaggt caagggcttg taaggtcaag agaggtcaag gacttgacgt
     5161 aggcgcgttc acccgaccta aatgccgccc cttttttgcc gcgacagcgg cttgcccgcg
     5221 cgggcgcaat cctgctgcat agggaccgag taatgacaag caagagcgga ggcaaccgtg
     5281 atcgcgatcg caagatgtcg acccgactcg ccaattcggg gcgcgatccc tttgcccatt
     5341 atggctatgt caacacgccg gtctatcacg cttcgacgtt gctctttcca agcgcgcagg
     5401 actacgtcgc gcatcgcggc cgctatcaat atggtcgacg cggcactccg acttccgaag
     5461 ccctggagac cgcgctcgcc gatatcgaag gaccgcaatg cgaggctgtc gccctgttgc
     5521 cgtcggggct cgccgccata tcggcagcgc tgttatcggt cgtccgagct ggcgaccata
     5581 ttctcgtgac cgacagcgct tacggaccga cccgtaaatt ctgtgacacc atcctccccc
     5641 gctatggcgt gacgactgca tattatgatc ctaccgtcgg ggccgacatc gcgtcgctca
     5701 tgcaccccaa caccgttgcg gtcttcctcg aaagcccagg gtcgctgtca ttcgaagtcc
     5761 aagacgttcc ggcgattgca gccgccgcgc acgcgcgcaa tgctgtggtg ctgatggata
     5821 atacctgggc gagccccatc catttccgcg cgctggagaa aggcgtcgac ctttcaattc
     5881 agtccggtac caaatatatc ggcggccatt cggacgtcat gcttggcgtg gtcgcttcca
     5941 aaaaaatggc ctggatgtct ctgaaggaaa cggtctttga aatggggctc tgtgtcgggc
     6001 cggatgacat gtttctaggc ttgcgcggat tgcgcaccat gggggtgcgc ctcgcccaac
     6061 attatgccgc cggaatgaaa gtcgcgcgtt acctggaggc acgcccggag atactgcgcg
     6121 tcatacatcc ggcactcgaa agccatccgg gccatgcgat ctggaagcga gattttaccg
     6181 gcggttgcgg gcttttcagc gtcatattca agccggctcc cgtcgcggcg gtgtatgcct
     6241 ttctgaacaa gctgacgcta ttcggcatcg gcgcttcatg gggcggtttc gaaagcttag
     6301 cgatcccgtt cgactgcacg cctgtccgct ccgcaacaaa gtgggcgccc ggtggtccgg
     6361 cggttcgctt ccatattggg cttgaggacg ttggcgacct tatcgccgat cttgaggaag
     6421 gttttgcggc cttcgcggcc acaatatcag aatgcgacac cccagagact tcggatcttt
     6481 ccggcaatat cgttggtaag atcaaatagt tctcttgttg tgaaagcgag cgagccgcca
     6541 gtggacgaca ccggcggctc gtcgcccggc acgcacgggg aggaacgcgc ccgactttaa
     6601 agctcagcgc ggggaccgaa actggccacg atcatcgcta cgccaaaaac tgaagcggtc
     6661 gaaacgccgt tccatccgcg aaaagattcc gaagcgtcgt ttctggttgt cgtcgagact
     6721 ttggtaaagc ggcgccatgg cgtcggcgta gcgcttgagg gcagcgctgc gggccgtcag
     6781 cacctcggca ttgcgctgag cacgctgaac cggatcgggc gactgttccg tgcgaggagc
     6841 cgctgtttga tcgccacgcg ttgcggcaag atcacgatag gcctgttcga acacaggcca
     6901 cgccttttct tgctccgggg tcaaccgcaa tccggcatgc agagcggcaa tgcgcgcatc
     6961 gaggaacgcc gcacgatctt ctgcgctgaa ctgatggcgc cacccgaagt cggagccgac
     7021 cgacgattgc tgagcatatg cagacgctcc cgcgatgaga gtcagtgcgg ctgcgcctgc
     7081 agcgattgtc ttgaacattg cgatctcctg ccgacgattt gatggcgtga aggagataac
     7141 cattcgcagg agaatacaag ttacgtttga attacaaatt cattacggcc aggcaataat
     7201 tgccagaaat gctaatcaga taaattcgaa tttttattcg gggcgcgcat ggtcccgtgt
     7261 agccggatca ctcagtcgat agccaacgcc gagctcggtc aacaggatct tgggccgatt
     7321 tggatcaatc tcgattttct gccgcagctt gcgtacaaag attcgtaagt actgcgtatt
     7381 gttgacatgc gcctgtcccc acactgattt gagcagattc tggtgagtta tgacttttcc
     7441 ggggtgctgc gcgagcactt ggagtaaacg atattctttg ggcgtaagat taaggcgctt
     7501 gccgtccagt tccaccgtcc gggccgcgaa gtcgatgacg agacgatcca atcgcaaagc
     7561 gctttcaccg tctttgcgct cgctttgacg tcgcaacaca accttggccc gcgccaacaa
     7621 ttccgacatg aaaaacggct tgacgacata atcgtcagcg ccaagttcaa gcaacttgac
     7681 cttctcgacc tcccctgccc gtaccgacag gacgatcacc ggaaccccgg accatccgcg
     7741 aatccgctcc agcaattccg atccgtcgaa gtcgggcaac gccaagtcga gaatcacaag
     7801 gtcgatcgga tgcagcgtaa tctcgcgcaa cgcatcggtg ccgttagccg cttcggttac
     7861 ccggtacccg cccagctcca taccggcccg tacaaactgg cgaatttgcg cctcgtcatc
     7921 gacgatgagt acgtgttgat cgccgtccgt catgtcagtc cttatggttc tccttcatcg
     7981 gcataggcag ccgaacggta accgtcatac ccttgtttac gccgtcgctg gtcgcctcaa
     8041 tggtcccgtt gttggcggcc acgaaagcgc tggcgatcca aaatcccaat ccaaggcccg
     8101 aagttagcag agagtgacga ttgccgcgga agaacttctg tcccagcaga gttcggtcgt
     8161 ccgcgtcaag gccggccccc tggtcgacga ccgaaatcat gaattgtccc gattcaacgt
     8221 atccccagac ggtgatggtg gactccggag gcgaatattt tgccgcattg tcgagaattt
     8281 gccccagcgc tcgctccatc aacaccgaat cgattcgcag cagaataagt tcttctggga
     8341 gcgtgacctc gaccgcgcgg ttggtcagcc gattgcgaca acgctgaagc gccgcattga
     8401 tgaagtcggc aggctctgcc cattcgagct tcgcctgcag gccattgctg ctgatgcgcg
     8461 aagcgtcgag aatattctgg atttcgacgt taagccgttc cgattcctga tgtatcaggg
     8521 cggtaagctt tttcaggcgg gcgtcgccgg taatctccgg cgccaaggac agcactgtcg
     8581 atgcaccgag aatcgaagac agtggcgtgc gcaattcgtg cgacaccgaa ccgattaggg
     8641 cctcgcgaaa ttgctccgtc tcggcgcggg tacgtgcttc cgatatcgtg cgcgcgagtc
     8701 ccagccgttg gagcgacagt ccggcgtcac cgatcaaggc aacgacgcgc gcacgcaatt
     8761 catcgagcgc ctcggatgga tgaccgagat cgaccgcaat gatgccgaag tccgcggtgt
     8821 tggttgagac cggccgcacc agccaggcac tgccacggtg gtcgtcgacc acaatgtcct
     8881 tcaagccctc gattccggta gccggcagcc tgctcacggc ctgcgtcacc gcctcgggaa
     8941 tttccacatc gccaagtcgc tctgatttcg cctccagcgt ccccagcgaa tcgaacaaca
     9001 gcaccctgcg acccacgacc gtttccaagt gctgctgcat ggcttcgaag attccggccg
     9061 gcgactgtgc cgaggaaatt cgttgcgaaa acgtgtagag atcgcggatc tcgttttccc
     9121 gcttgagcgc gcgcgcggcg tcgcgacgcg tcttggccgc aagatggcca agtaccaacg
     9181 aaacgacgag aaagacgacg acgccaagga cacgcgatcg tgagtcggcg ctggtcgtat
     9241 agaacgggct gtagaagaaa agagttaacg tcgccgcgcc gccgatcgcc gttatggcag
     9301 cagacagcgt gccccagagc atggcggcca caacgatcgg aatcaggaat gtcagcgcga
     9361 cgggcggcag ttcctgaata taccgcataa ataatagaaa gacgttcgtg acgatgacga
     9421 acacgagcgc catgataacc ccggtaacgc cgccaggggc catggccttg cgaacccaga
     9481 tccgtccgga gtgaaaatat ctcttggcaa gaagcaacat cgcaaagccg ccggcgggct
     9541 gcaaacgggc tcgatcatcc tccaaaggca gtgttgttcg ctggatactc atagggatat
     9601 gagaacgcat tgcaaacgat agtcaattga gattttgcct accggctcgg cagccgagac
     9661 gatctgccga gccggatcat gataccagcg ccatcttccg ttcgcgaaaa acaaagtaga
     9721 gattgcgtaa ataaacgaac aggccaagcc cttggccgat gatgaaaact ggatcgcgtt
     9781 tgtaaagcgc ataggcgagc aacaagaccc cgccgccaat cgaaaagaac cagaacgcga
     9841 ccggcatcac gctgcggccg acccgctcgg aagccagcca ttggacgatg aagcgcattc
     9901 cgaacagcga ctgtccggca tagccaagca gtagccccca atttagctcc agaaagaaaa
     9961 cattctgcag atagtccccg accgattgag acagactaac gagcatcgca aacaacctcc
    10021 gaaacgatcg gcacacgttt cctgcgccgg attagccacc acacgcccgc gagatcaagg
    10081 atgccaatcc acagccgatc ccacatgccg taattcgaga caccatgcag ccgcggtcga
    10141 tcgaccacgt ccacataggc gatgcggtag ccttcgcgcc gtaccaacgc cggtagaaac
    10201 cggtgcaggc catcgaaata gggcagcgcc aaaaagatct cgcggcggaa cgctttgagc
    10261 ccgcatccgg tatcgcgggt gccatcgtgc aaaatcgctt tgcgcgtccc attggcaatc
    10321 cgcgattgca gccgcttgaa gcctgtggcc ttgcggccga cacgctgacc agccacaagc
    10381 cccaccatgg ggtcgcgctc cagcgcttcc accagggcag ggagaaaggc gggattgttt
    10441 tggccatctc catcaagcgt caccacgatg gtggcgcggg ctgcagcgac gccgctgcgc
    10501 accgccgcgg attgaccaca cgaaacctcg tgcctgatct gacgtaagaa tccgcacgtt
    10561 ttcattgcgg atctcagttc ggcttcggtg tcgtcgcgcg atccgtcatt gacataaatg
    10621 atttcgatgg gcgcaaacgt caccagcgcc tgtacaattt ccttgatcag cggcacgata
    10681 ttgccggctt cgttacgtac cggcaccacg accgagatgc gtggcgccgc ggcaccggac
    10741 gggaatcgac tgtcctcagt catcaagaag tccgcttctg ctgtccggga tatcccgctg
    10801 ttgcgaattc cgtctccggc gggcaattca acgaaatgaa caggttcgaa gagtgacccg
    10861 cccgacagac tatcccgcgc gcacggcgtt tttatgaggc aacgagcgtg ccggcaacct
    10921 gtttgatccg ccgttgcgac gggcccggca tagtttgaat ggcgccgtcg gagccgacaa
    10981 aaaacccaag acggcgtgcc gcaaaccaat cgcgcaccaa caaggcgccg aacgccccga
    11041 acgccgcacc ggcga
//
LOCUS       DATILV010000960         4082 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3050369, whole genome shotgun sequence.
ACCESSION   DATILV010000960 DATILV010000000
VERSION     DATILV010000960.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4082
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3050369"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..761
                     /locus_tag="VLJ17_23120"
     CDS             <1..761
                     /locus_tag="VLJ17_23120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0019700 - organic phosphonate catabolic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate 5-phosphate
                     C-P-lyase PhnJ"
                     /protein_id="HSV25906.1"
                     /translation="GWGTGGVQVTAAIIGPDDILKVIDQGSDDTTNAVSIRTFFVKTS
                     GIRTTTATTDATLIQTRHRIPEAALREGQILVFQVPIPEPLRFLEPRETETRRMHALE
                     EYGLMHVKLYEDISRHGEIATSYAYPVKVDGRYVMDPSPTPKFDNPKMNDCPALQLFG
                     AGREKRIYAIPPYTQVTSLDFEDHPFVPYRFNGTCALCGATDSYLDEIITDDLGSRMF
                     VCSDTDHCATRRAQGHVPPSVGGDVPRHDPEPTP"
     gene            758..1543
                     /gene="phnK"
                     /locus_tag="VLJ17_23125"
     CDS             758..1543
                     /gene="phnK"
                     /locus_tag="VLJ17_23125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018835 - carbon phosphorus lyase activity
                     [Evidence IEA];
                     GO_process: GO:0019634 - organic phosphonate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnK"
                     /protein_id="HSV25907.1"
                     /translation="MINAEDQPLLQADGLSKWYGPQLACRDISFELYPGEVIAVVGES
                     GAGKTTLLQLLSAQLVPSAGHVCYRMRDGAMHDLASLGEAERRFLFRTDWGYVHQDPA
                     LGLRMAVSAGANVGERLMAVGWRHYGRIRDAAQGWLDRVEIARERIDDTPTTYSGGMR
                     QRLQIARNLVTDPRLVFMDEPTGGLDVSVQARLLDLIRELVAQLRLAVVIVTHDLAVA
                     RLLSHRIIVMKDGAVTESGLTDQVLDDPREPYTQLLVSSILPA"
     gene            1552..2238
                     /gene="phnL"
                     /locus_tag="VLJ17_23130"
     CDS             1552..2238
                     /gene="phnL"
                     /locus_tag="VLJ17_23130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007597608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018835 - carbon phosphorus lyase activity
                     [Evidence IEA];
                     GO_process: GO:0019634 - organic phosphonate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnL"
                     /protein_id="HSV25908.1"
                     /translation="MYVLDLVNVKKSFILHLQGGLRLPVVNGVNFAVQPGECLALAGP
                     SGCGKSSILKMIFGSYRCDGGHILVRDNDRIVDIATASPRTVITTRRRAVAYVSQFLR
                     AVPRVATIDVVAQTLDRTSRDEARMGAAALLRRLNIPERLMAVPPVTFSGGEQQRVNI
                     ARGFLPERPLLLLDEPTASLDSENCAVVIDLIAEKKRRGVAVVAIVHDQDARNAIADR
                     IVDIASFAAA"
     gene            2242..3393
                     /locus_tag="VLJ17_23135"
     CDS             2242..3393
                     /locus_tag="VLJ17_23135"
                     /EC_number="3.6.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0019700 - organic phosphonate catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate
                     5-triphosphate diphosphatase"
                     /protein_id="HSV25909.1"
                     /translation="MTNELLVLANARLVLADDVIEGGWIAAADGVIAEIGHGEPPADA
                     DDMAGDLIIPGLVELHTDHLEAHYMPRPKVHWDPISAVVSYDGQLAVCGITTVLDSLR
                     VWREEGADEVSGEATLLADAIAAARAADMLRADHFLHLRCEVPMPDVVDETRTLIGRD
                     DVRLLSLMDHTPGQRQFRDENKLRDYYRGKSGGLTNAELDVMFEKRLQHAARHGAKNH
                     RALVELARQHRTPLASHDDTTREHVALSIDDSVAIAEFPTTIEAARALHAGGVRVLMG
                     APNLVRGGSHSGNVATVEAARAGVLDVLSSDYLPASLLMAALCLPKAVPTIALPAAVR
                     TVSKTAAEAVGLNDRGEIAVGKRADLVRVCPSQKVPVIRSVWRKGRRVA"
     gene            3390..3965
                     /gene="phnN"
                     /locus_tag="VLJ17_23140"
     CDS             3390..3965
                     /gene="phnN"
                     /locus_tag="VLJ17_23140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0019634 - organic phosphonate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate metabolism
                     protein/1,5-bisphosphokinase (PRPP-forming) PhnN"
                     /protein_id="HSV25910.1"
                     /translation="MMPVSAAQMQPIGPGRLVVVSGPSGAGKDTLLRFARDLLGGDPN
                     IVFPHRVVTREPSTEEDHEVFSEADFTAAVVAGDFAFWWDAHGLKYALGAAVDDDIRA
                     GKTVVCNVSRAVISQLRRRYANVCVVLVTAPADILAARLAARGRITDGPVGARLARDA
                     PPQRDLAPDVVIENVGDPRNGGKKLIAAIGA"
BASE COUNT          736 a         1303 c         1259 g          784 t
ORIGIN      
        1 acggttgggg caccgggggc gtgcaggtta cagccgcgat catcggaccg gacgacatcc
       61 tcaaggtaat tgaccaaggt tcggacgaca ccaccaacgc ggtgtcgatc cggacctttt
      121 tcgtaaagac ctccggcatc cgcaccacga ctgcaacgac cgatgcgacc ctcatccaga
      181 ctcgccatcg tattcccgag gcggcccttc gcgaaggcca gatcctggta tttcaagtgc
      241 cgatcccgga accgctgcgc tttctcgaac cgcgcgaaac cgaaacgcgc cgcatgcacg
      301 cgcttgagga atacgggctc atgcatgtga agctttacga agacatcagc cgccacggcg
      361 agatcgctac cagctatgcc tatccggtca aggtcgacgg ccgctatgtc atggatccct
      421 cgccgacacc gaaattcgac aatccgaaga tgaatgattg cccggccctg caattgttcg
      481 gtgccgggcg cgaaaagcgc atctacgcaa tcccgcctta cactcaggtg acgtcgctcg
      541 atttcgagga tcatccgttc gtgccctacc ggttcaacgg cacctgtgcg ctgtgcggtg
      601 cgaccgacag ctatctcgac gagatcatca ccgacgacct tgggtcgcgg atgttcgtgt
      661 gctccgatac cgaccattgc gcgacgcggc gggcgcaggg gcacgttccc ccctccgtag
      721 gaggagatgt gccgcggcat gatccggagc cgacgccatg atcaacgccg aggatcagcc
      781 gcttcttcaa gcggacgggc tctccaaatg gtacggcccg cagctcgcct gccgcgatat
      841 ctcattcgaa ttataccccg gcgaagtgat cgcggtggtt ggcgaatcgg gggccggcaa
      901 gacgacccta ctgcaacttc tgtccgcgca gctcgtgcct tcagccggcc acgtctgtta
      961 tcgcatgcgt gacggcgcca tgcatgacct tgcgtctctg ggcgaagcag agcgccgctt
     1021 cttgttccgt accgattggg gctatgtaca tcaggatcca gctcttggtt tgcgcatggc
     1081 ggtgtcggcc ggggccaatg tcggcgagcg gctgatggcg gtgggctggc ggcactacgg
     1141 ccgcatccgc gacgcggcgc agggttggct cgatcgcgtc gagatcgcgc gtgagcgcat
     1201 cgatgacacg cccacgacgt attctggtgg catgcgccaa cgcctgcaga tcgcccgcaa
     1261 tcttgtcacc gacccgcgtc tcgtcttcat ggatgaacct accggtggtc ttgatgtgtc
     1321 ggtccaagca cggctgttgg accttatccg cgaactggtc gcgcaattgc ggcttgccgt
     1381 cgtcatcgtc acccacgatc ttgctgtcgc acggctgtta tcccaccgga tcatagtgat
     1441 gaaggatggt gcggtgaccg aatccgggct taccgaccag gtgctggacg atcctcgcga
     1501 accgtatacg cagttgctgg tgtcctcgat ccttcctgct tgagatgccc gatgtatgtg
     1561 cttgatcttg tcaatgtgaa gaagtccttc attttgcatc tgcaaggcgg ccttcgtctg
     1621 ccggtcgtca acggcgtcaa tttcgcggtg cagcccggcg aatgcctcgc gctcgctggc
     1681 ccgtccggct gcggaaaatc atcgatcctg aagatgatct ttggcagcta tcgctgcgat
     1741 ggcggccata tcctggtccg ggacaacgac cgcatcgtcg acatcgcgac ggcgtcgcca
     1801 cgcaccgtca tcaccacaag acggcgcgct gtcgcctatg tcagccagtt tttgcgcgcc
     1861 gtcccgcggg tcgccaccat tgatgtggtg gcgcaaacac tcgatcgcac gtcgcgcgac
     1921 gaagcgcgga tgggtgcagc cgccctgctg cgccggctca atattccaga gcggctgatg
     1981 gcggtgccac cggtgacctt ttcgggtggc gagcaacagc gagtgaacat cgctcgggga
     2041 ttcctgcccg agcgcccgct gttgctactg gacgagccga ccgcttcgct cgacagtgaa
     2101 aattgtgcgg tggtgataga cctcattgct gagaagaagc ggcgtggcgt tgccgttgtg
     2161 gcgatcgtcc acgaccaaga cgctcgcaat gcgatcgctg atcgaatcgt cgatatcgca
     2221 agctttgcgg cagcatgaac catgacgaat gagctactgg tgcttgcaaa tgcccgtctg
     2281 gtgctcgccg atgatgtcat cgaaggcggc tggatcgccg ccgcggatgg cgtcattgcg
     2341 gaaatcggac acggggagcc accggcggat gccgatgaca tggcaggcga cctcatcatc
     2401 ccgggccttg tcgagcttca taccgatcac ctcgaagcgc actacatgcc gcgccccaag
     2461 gtacattggg atccgatatc agcggtcgtg tcctatgacg gccagctcgc cgtctgcggc
     2521 atcacaaccg tgctagattc gctgcgcgtc tggcgcgagg aaggcgccga cgaggtcagc
     2581 ggtgaagcga cgctactcgc cgacgccatt gcggcggcgc gcgccgcgga catgttgcgg
     2641 gcggatcatt tcctgcatct gcgttgcgaa gtaccgatgc ccgacgtggt cgacgagacg
     2701 cgaacattga tcgggcgcga cgatgtgcgg ctgctctcgc tgatggatca cacaccgggg
     2761 cagcgccaat ttcgcgacga gaacaagctg cgcgactact atcgcggcaa atctggcggg
     2821 ctcaccaatg ccgagctgga cgtgatgttc gaaaagcggt tgcaacacgc tgcccgtcac
     2881 ggcgccaaga accaccgcgc actggtcgag ctcgcgcgcc aacaccgcac gccgctcgcc
     2941 agccacgacg acaccacacg tgagcacgtc gctctgtcca tcgacgacag cgtcgccatt
     3001 gcggagtttc caaccaccat tgaggccgcc cgtgcgctcc acgccggcgg cgtgcgtgta
     3061 ctaatgggcg cacccaatct tgtgcgcggc ggctcacatt ccggcaacgt cgcgaccgtc
     3121 gaggctgcgc gagctggtgt gctcgacgtg ctgtcttcgg actatctgcc ggcgagcttg
     3181 ctgatggcgg cgctgtgtct gccgaaggcc gtgccgacaa tcgcgcttcc cgccgccgtg
     3241 cgcaccgtta gcaagactgc ggccgaggcc gtaggcctga acgatcgtgg tgagatcgca
     3301 gtcggcaagc gagccgatct ggtgcgcgtt tgcccgtccc agaaagtgcc tgtgatccgc
     3361 tcggtgtggc gcaaggggcg gcgtgtcgca tgatgccggt gagcgcagcg cagatgcagc
     3421 cgatcggacc gggccggctg gtggttgttt ctggcccgag tggcgccggc aaggacaccc
     3481 tgctgagatt tgctcgcgac ctcctaggcg gcgatcccaa catcgtcttt ccgcaccgcg
     3541 tcgtcacccg agaaccatcg accgaggagg accacgaagt attttccgaa gcggacttca
     3601 ccgctgcggt cgtggcgggt gatttcgcct tctggtggga cgcccacgga ttgaaatacg
     3661 cgcttggcgc cgccgtggac gatgacatcc gtgctggcaa aaccgtggtg tgcaacgtat
     3721 cccgcgccgt gatctcacaa ctacgccgcc gctacgccaa tgtctgtgtc gtgctcgtga
     3781 cggcaccggc tgacattttg gccgcacgtc ttgcggcacg gggccgcatc accgacggtc
     3841 ccgtcggggc gcgtcttgcc cgcgacgcac cgcctcaacg cgacctcgcg ccggatgtgg
     3901 tgattgaaaa tgtcggcgac ccgcgaaacg ggggcaaaaa actcatcgcc gcaatcggtg
     3961 cgtaactctc aatctcacga aggccaagcg cgcacgtggc ttctattcga atccacccga
     4021 cgtaggccgt ccggcccgcc gagcgccgaa ctgttgtctg tcaagctcta ccttgccgac
     4081 ct
//
LOCUS       DATILV010000961         6225 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_490223, whole genome shotgun sequence.
ACCESSION   DATILV010000961 DATILV010000000
VERSION     DATILV010000961.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6225
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_490223"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..352)
                     /locus_tag="VLJ17_23145"
     CDS             complement(<1..352)
                     /locus_tag="VLJ17_23145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25911.1"
                     /translation="MTKPTSPTPETIAGGLTARERVIPFCAATDIDHAAVGIVTSAMQ
                     IMEVRGLIERNHSTSHYVLTDNGHAVFRALLKRGPTFRPRRMMVPDIVPTEPEVIPQI
                     APTEPEVIPQIVPTE"
     gene            complement(787..1059)
                     /locus_tag="VLJ17_23150"
     CDS             complement(787..1059)
                     /locus_tag="VLJ17_23150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25912.1"
                     /translation="MSLWWLTYNRHGRLHGVVIIEAASLISACIGVADNALDKGASFA
                     EGHELDAVQSALIPPGYIGMMLSRKEAALLLNRIERGDGKRRLIRG"
     gene            complement(1067..1558)
                     /locus_tag="VLJ17_23155"
     CDS             complement(1067..1558)
                     /locus_tag="VLJ17_23155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25913.1"
                     /translation="MPTSVPKPSSNPAFEARPLLSASGWYVRVAWVSGKRDHIPGFIS
                     KREAQRWIEEKGPTWLSAHSKANGFDGAHMAQERRDLEISCLYFNVAIECFNKAAIEE
                     HAEGAEVFRRMGRRYISEAELYDATLKRKLAGRFASPQLWRRIGASSRARGRSIVSHR
                     LAQ"
     gene            complement(2146..2874)
                     /locus_tag="VLJ17_23160"
     CDS             complement(2146..2874)
                     /locus_tag="VLJ17_23160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007615073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HSV25914.1"
                     /translation="MIDIKSISKAYGATQVLKSCSTRVAKGEVVIVCGPSGSGKSTLV
                     KCVNALEPFQSGDIVLDGVSLTDPKTNLPMLRARVGMVFQSFELFPHLRVLDNLCLAQ
                     EKVLGRTRSEAEVKGFKLLDRVGLAEHAQKHPGQLSGGQQQRVAIARALAMDPIIMLF
                     DEPTSALDPEMVNEVLDVMVALAKDGMTMMVVTHEMGFAHKVADRVIFMDKGEIVEDA
                     TKEEFFGTPRSARAQQFLSKILQY"
     gene            complement(2897..3589)
                     /locus_tag="VLJ17_23165"
     CDS             complement(2897..3589)
                     /locus_tag="VLJ17_23165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453382.1"
                     /note="The N-terminal region of this protein, as described
                     by TIGR01726, is a three transmembrane segment that
                     identifies a subfamily of ABC transporter permease
                     subunits, which specificities that include histidine,
                     arginine, glutamine, glutamate, L-cystine (sic), the
                     opines (in Agrobacterium) octopine and nopaline, etc;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_process: GO:0015837 - amine transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HSV25915.1"
                     /translation="MFSNLDFDVIWRSLPYLFFEGMRFTLLLTALATAGGIVLGTLIA
                     MMRLSSVPILPWLAVGYSNIMRSLPLVLVIFLFYFLIPYVGQWAIGASRPIAVGAFNS
                     VLVTFTLFEAAYFSEIMRAGIQSIPRGQVAAGSALGLTYWQSMHYVILPQAFRNMLPV
                     LLTQTIVLFQDTSLVYVLSITDFLGAASKVAQRDGRLVELYLFTAAVYFVISLGLSQL
                     TKRLEALTAIIR"
     gene            complement(3611..4342)
                     /locus_tag="VLJ17_23170"
     CDS             complement(3611..4342)
                     /locus_tag="VLJ17_23170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HSV25916.1"
                     /translation="MGYNWNWGIFFEPSPEGTGTYLDMLLSGVKWTLLTAVIAWTLAL
                     VLGSLLGIMRTLPAKTANRIGTVYVELFRNIPILVQLFLWFFVLPELLPRAAGLWLKQ
                     LPNASFWTAAIGIGFYMSARVAEQVRAGINTLPRGQAMAGRALGLTTAQTYRYILLPM
                     AYRIILPPLSSEFLNTIKNTAVALTIGLLELTGRARSMQEFSFQVFEAFIAATAFYLL
                     INAFVVIGMRMIERRVAVPGYITGR"
     gene            complement(4417..5319)
                     /locus_tag="VLJ17_23175"
     CDS             complement(4417..5319)
                     /locus_tag="VLJ17_23175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HSV25917.1"
                     /translation="MKCLAFTAAVASLLTSGAGAQELSGTLKKIKETGAITLGFRDSS
                     VPFSYLDDKQQPVGYAMDICYKIVDAVKAELKLQKLEVKLNPVTSATRIPLMANGTID
                     LECGSTTNNAERQKQVGYTNTHFLTASRYVVKVGSNIKKIDDLKGKTVVSTAGTTNIK
                     QVTEANAARKLGLTILPAKDHAEAFLMVETDRAVAFVMDDILLAGLIASSKDPKAYTI
                     SEDAFSLPEPYGIMLRKDDAPFKKVADAATAALYKSPEGAALYAKWFTSPIPPKGLNL
                     NVPLNASMRKVLATPSDSPDPASY"
BASE COUNT         1317 a         1809 c         1790 g         1309 t
ORIGIN      
        1 gctcggtcgg cacgatctga ggaatgactt caggctcggt cggcgcgatc tgaggaatga
       61 cttcaggctc ggtcggtacg atgtcaggaa ccatcatgcg cctaggtcta aaggttggcc
      121 cccgcttaag cagggcgcga aatacagcat gcccgttgtc cgtgagcaca tagtgcgacg
      181 tactgtgatt gcgctcgatc aggccgcgga cttccattat ctgcattgcg ctcgtgacga
      241 tcccgaccgc cgcgtgatcg atgtccgtcg cggcgcaaaa cgggatgacg cgctcgcgtg
      301 ccgtaaggcc gcccgcgatg gtttccggag tcggtgacgt tggcttggtc ataggctacc
      361 cgatcgatcc gcccgcgcct ggcggccagc attgcggcgt gtaaccctgc cggcattggg
      421 gccgagccct ggcaccacga aacaccgtag gccccggtcg gcggtgatgg atcggcttca
      481 agtggctggc gatctgcgtc gtcctttcag ggccgttgtt cctgggtcag taatttgcag
      541 ccgctttacc ctcgatcgtt ttcgcgccgg ccttgatggt ctcggtcacc accgttgcaa
      601 gctccgcgag cacaagcctt gccaatcata gaccatcagc accgcctcgg tgacaccgcg
      661 cgggctgccg gcgagcaatt cgagcgcgcg gcgttgctct gggctgagct tcataagtcg
      721 ggcaacagcg cccgcagcgg agttggatca ttccccgctc cgcgcgagct ggcggggctt
      781 ggcattttag cctctaatca accgcctttt gccatcgccc cgctcgatcc tgttgagaag
      841 cagggccgcc tctttgcgcg aaagcatcat gccgatataa ccgggcggaa tcagtgccga
      901 ctggacggcg tcaagttcgt ggccttcggc aaacgacgcg cctttgtcta gggcgttatc
      961 agcaacgcca atgcaggcgc taatcagcga cgcggcttcg atgatgacga cgccatgcaa
     1021 tcgaccgtgc cggttgtagg tgagccacca aagggacatc tgggccttat tgcgcaaggc
     1081 gatggctgac aatactgcga ccacgggcac gcgacgacgc acctatgcgc cgccacagtt
     1141 gaggcgatgc aaaccgcccc gccaatttac gcttaagcgt tgcgtcgtat agctcagcct
     1201 ccgaaatgta acggcgaccc attcgcctaa agacctcggc gccctccgcg tgctcttcaa
     1261 tcgcggcttt gttgaaacac tcgatcgcga cattgaagta cagacaagaa atctccaaat
     1321 ccctgcgctc ttgagccata tgcgcgccgt caaatccgtt cgctttgctg tgcgccgaca
     1381 accacgttgg gcctttctct tcaatccagc gctgtgcttc ccgcttggag atgaagcccg
     1441 gaatatggtc ccgcttgccg gagacccaag cgactcggac ataccatcca gaagctgaca
     1501 ggaggggacg tgcttcaaag gcaggatttg aactcggctt cggaactgac gtaggcatgg
     1561 cgcgcctcct atgactttag gggcaacggt cgccgtttcg ggtgccggtc gggagttgat
     1621 acctcggggg gctttgaggg cgtcccttga ttgctggcga tcctgcgcct atcgcgcgca
     1681 aatagcgagt cttaaatcag actgtgcctg gccatttgat cgcgatcaac ttggtttttg
     1741 acgtcttgcg gtcacaagtt ccggacctca tggcgacgaa gacaatggaa actgcaacac
     1801 tgttgaacgc cctcaatgcg gggctcaggg cagcggtgga cggccttgag aagctccagc
     1861 atatgcccgg acccggtaca tcttgacaac tgagccggca ctcgatccgt cccccgccgg
     1921 ggcgcaagcc gcgccgcggc cgtctcgtcg atacttctca ccccgtccgg cataccgcag
     1981 tggccgccac gcctgtgtgg agcggcgtta ctggggacac aagccccact gctgccgttg
     2041 cgaaaacttc tgtgccgacg tccgtttcga tcaaatgcgg aaatctgtca ccgtgtttca
     2101 gaaagcgtgt gtgcaacaca actgaggccg cgcaatcaac cgcactcaat attgcagaat
     2161 cttggaaaga aactgttgcg cgcgtgcact ccgcggggtg ccgaagaatt cttccttcgt
     2221 agcgtcttcg acgatctcgc ctttgtccat aaagattacg cggtcggcga ccttgtgggc
     2281 gaagcccatc tcgtgcgtga cgaccatcat ggtcatgccg tccttcgcga gtgcgaccat
     2341 tacgtcgagc acctcgttga ccatctcagg atcgagcgca gacgtaggct cgtcgaacag
     2401 catgatgatc ggatccattg caagtgcgcg cgcgatggca acacgttgct gctgaccgcc
     2461 ggaaagctgc cccggatgct tctgagcgtg ttcggcgaga ccgacgcgat cgagaagttt
     2521 aaatcccttg acttctgcct cgctacgagt tcgcccaagt accttctcct gcgcaaggca
     2581 taaattgtcg agcacgcgca aatgcgggaa taattcaaaa ctctggaaca ccatgccgac
     2641 gcgagcgcgc agcatcggca gattcgtttt tgggtcggtg aggctgacgc cgtcgagcac
     2701 gatatcaccc gactgaaacg gctccagcgc attgacgcac ttgacgagcg tcgattttcc
     2761 ggaacctgac ggaccgcata caatgactac ctcgcctttg gctacccgcg tcgagcaact
     2821 cttcaaaacc tgggtcgctc cgtaggcctt gctgatggac ttgatgtcga ttatcgcttc
     2881 tttcatggca cgtttctcaa cgaatgatgg cggttagcgc ttcgaggcgc ttggttaatt
     2941 gcgaaagacc gagcgagatc acgaaataaa cagcggcggt gaaaagatac agttcgacca
     3001 accggccgtc ccgctgggcg accttcgacg cggcgccgag gaaatccgtg atagaaagaa
     3061 cgtaaactag ggaggtatcc tgaaacagga caatcgtctg cgtcagcagc accggcagca
     3121 tattgcggaa tgcttggggc aagatgacgt agtgcattga ctgccagtac gtgagtccga
     3181 gtgccgagcc tgctgccacc tgaccgcgcg ggatggattg aatgccagcg cgcatgattt
     3241 ccgagaagta cgccgcctcg aacagcgtaa aagttacaag gacagagttg aacgcgccaa
     3301 cagcaattgg ccgtgaggca cctatggccc attggccgac gtaggggata aggaaataga
     3361 aaaggaaaat caccagcacc aaaggtaatg atcgcatgat gttggaatat ccaaccgcca
     3421 gccacggtag gatcgggacc gaggacaacc tcatcatagc gatcaatgtg ccgaggacga
     3481 taccgccagc agtcgcaagc gctgtcagga gcagcgtgaa ccgcatgccc tcgaagaaaa
     3541 gatatggcaa cgaccgccag atgacatcga agtcgagatt gctgaacatg gccgttctac
     3601 tctctggtgc ctatcggccc gtgatatagc cgggcacggc gacacgacgc tcgatcatac
     3661 gcatcccgat aacgacgaaa gcgttgatca gcagataaaa cgctgtcgct gcaatgaaag
     3721 cctcgaacac ctggaaagag aactcttgca ttgaccgggc gcggccggtg agttcaagga
     3781 gcccgattgt caaggcaacg gccgtattct tgattgtgtt gaggaactca gacgagagcg
     3841 ggggcaggat aatgcgatac gccatcggca gaaggatgta gcggtaggtt tgcgccgtgg
     3901 taaggccaag cgccctaccc gccatcgctt gcccacgcgg caaagtattg attccggcgc
     3961 gtacctgttc ggcgacgcgc gccgacatgt aaaatccaat gccgatggcc gcggtccaga
     4021 atgaggcatt cggtaattgt ttgagccaaa gcccagccgc gcgcggcaac agctcaggga
     4081 ggacgaaaaa ccaaaggaac aactgcacga ggatcggaat attccggaac agctcgacat
     4141 atacagtgcc gatccggttc gcagtctttg cgggtagcgt gcgcataatg ccaagcagcg
     4201 agcccagaac cagggcaagc gtccatgcga tcaccgcagt cagcagcgtc cacttgacgc
     4261 ccgacaacag catgtcgaga tacgtcccgg tgccctcagg cgacggctca aagaagatac
     4321 cccagttcca attgtagccc atcgcggcgc ctcgatactt tgttaaagta cccccgcggc
     4381 agccgaccaa ccgccacggg aatacgatat cttgtctcag taggaagccg gatcaggcga
     4441 atccgacggc gttgcaagca ctttcctcat cgacgcgttc agcggtacat tgagattgag
     4501 cccttttggc gggatcgggc tggtgaacca cttggcatag agcgcagcac cttccgggct
     4561 cttgtagagc gcagccgttg ccgcatccgc gacctttttg aacggagcat catcctttcg
     4621 cagcatgatg ccgtagggct ctggcagcga gaacgcatct tccgaaatgg tgtaggcctt
     4681 tggatctttc gacgaagcga tcaggcccgc gagcagaata tcgtccatca caaacgccac
     4741 ggcgcgatcg gtctcgacca tgagaaatgc ctcagcgtga tccttggcgg gcaggattgt
     4801 tagaccaagc ttgcgcgcgg cattggcctc agtcacttgc ttgatattgg ttgtccctgc
     4861 ggttgagacc acggttttac ctttgaggtc gtcgatcttc ttgatgttgc tcccgacttt
     4921 cacgacgtag cggctggcgg tcaaaaaatg cgtattggtg tagcctactt gtttttgccg
     4981 ctccgcatta ttggttgtcg atccacattc aagatcgatt gtgccgttgg ccatcagcgg
     5041 aatccgcgtt gcggacgtga cgggattgag cttgacttcc agcttttgga gcttcagctc
     5101 cgccttcacg gcgtcgacga ttttatagca aatatccatc gcgtagccga ccggctgctg
     5161 cttgtcgtcg agatatgaga acggcaccga gctgtctcgg aagccgagtg tgattgcacc
     5221 ggtctcttta atcttcttca acgtgccgga aagttcctgc gcgccggccc cgctcgtcaa
     5281 gagactggcg acagctgctg tgaatgcaag gcatttcatg ttcttttgtc tccatgtgaa
     5341 atcctggctg atcccgccag ttgggaatgt gctagttccg ctgacgcatc gcatttggcg
     5401 cgactttccg gatggttcat cagcttgtcg acggcgtacg cgtatgagcg ctatttcggt
     5461 aaggcgcggg gctgacccgc tcatgcatgt tgaaccaccc ttgcgctcag gggcgtggtc
     5521 ctccatcaac tggcgggtac tttccactaa agcgaaaaac tcttcggacg tctggctcgt
     5581 gaggctcttg gcatatttaa tcaccatggc gatgcgggtc tcgtcgggca gcaatctctc
     5641 caccggaaaa tcgcggattt tttcgatcat atcactctgg tcatcgatct tgttgcgatc
     5701 accgccgaac acgcccggtg caccggtaat aatagcaagc ggcgtgcaaa ccgtcgtctc
     5761 ttccctcgcc ttgacgaaga ggccacccgg cttcaaggtg aaggtttgca gctggtagac
     5821 gccctggcca ttcaccttgg tgcgcaagag ctcccggctc acgaccggaa tgactttgag
     5881 ccccttctcg acgatcagct tgatgttggt gtttcggggt cggtgaactg ctcgaaaaat
     5941 cccactgcgc cgtttgtctc ggaagccaat tcgtgatcac cgccgtcgca tcggccacgt
     6001 agcgcttatt ggcctcgggc acgcggccaa ggccttccgg atcgctcgac tgcaggtagg
     6061 cgaagctcgc ggcggaacca cacgactgcg gcggcaagat gaacggaatg cgccgcgcca
     6121 agcccagaat gtgaccatag ttgttgaggt ccgggttctt ggtcaccatc caaaggcctt
     6181 cgcaggcaat gtcgctgcgg atcacggcga gcttcttgaa ctcct
//
LOCUS       DATILV010000962         1652 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1774844, whole genome shotgun sequence.
ACCESSION   DATILV010000962 DATILV010000000
VERSION     DATILV010000962.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1652)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1652)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1652
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1774844"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(60..941)
                     /locus_tag="VLJ17_23180"
     CDS             complement(60..941)
                     /locus_tag="VLJ17_23180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSV25918.1"
                     /translation="MRTLKIGDVTISSIVERDGPWRRPEDMFPAYDPDVGRRHLAALD
                     PEVFDPASGRLVITYQTYVVRTPKQTILVDTCTGEDKGYAPPMDFPKQPWLDGFRDTG
                     LTFDDIDYVFCTHLHIDHCGWNTVLRDGRWVPTFPKAKYVFHKREYAAWEEATKRGDT
                     PPGNVWRYNCEPVVAAGQALLVDDDYQLDDTLWLTPTPGHSPCHCCVNIRSGGQRAVI
                     IGDLMHHALQCREPDWSTVFDWNGMQAAQSRRRFLGEVAGTDTFVLPIHFPHPTTGLI
                     KADGERFRYQFIRDNSH"
     gene            complement(1023..1214)
                     /locus_tag="VLJ17_23185"
     CDS             complement(1023..1214)
                     /locus_tag="VLJ17_23185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25919.1"
                     /translation="MVGEDLLGFEIGEFLIAGIMQKQRALRPSPTNTIASRGMLILLL
                     ITLRPLPVGIIKMDIWESP"
     gene            1152..1538
                     /locus_tag="VLJ17_23190"
                     /pseudo
     CDS             1152..1538
                     /locus_tag="VLJ17_23190"
                     /inference="COORDINATES: protein motif:HMM:NF037928.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="host attachment protein"
BASE COUNT          336 a          486 c          492 g          338 t
ORIGIN      
        1 gatcgtcggt atttctcttg tacggtcggt gttcgacaga cggcctggga caagccaaat
       61 taatgagaat tgtcgcgaat gaattggtaa cgaaacctct cgccgtcggc cttgatcagt
      121 ccggtggttg gatgtgggaa atggatcggc aggacgaacg tatcggttcc ggcaacttcg
      181 cccaggaatc gccggcgcga ctgcgccgcc tgcataccat tccagtcgaa gaccgtcgac
      241 cagtccggct cgcggcattg cagggcatga tgcatcaggt ctccaatgat aacggcgcgt
      301 tgcccgcccg agcggatatt gacgcagcag tggcacggcg aatggccagg cgttggcgtg
      361 agccacagcg tgtcgtcgag ttgataatcg tcatccacca gtagagcctg gccggccgcg
      421 accaccggct cgcagttgta tcgccatacg ttgcccggag gcgtgtcgcc acgcttcgtc
      481 gcttcctccc atgcggcgta ttcgcgttta tggaacacgt attttgcctt cggaaaggtc
      541 ggcacccagc ggccatcacg cagcacggta ttccaaccgc aatggtcgat gtgcagatgt
      601 gtacagaaca cataatcgat gtcgtcgaat gttagcccgg tgtccctgaa cccatcgagc
      661 caaggttgct ttgggaagtc catcggcggc gcatagccct tgtcctcgcc ggtgcaagtg
      721 tcgaccagga tcgtttgctt cggcgtacgc acgacgtatg tctggtaggt gatcaccagg
      781 cgccctgagg ccgggtcgaa gacctccggg tcgagtgcgg ccagatgccg ccgaccgacg
      841 tcagggtcat aagcgggaaa catgtcctct ggccgccgcc agggcccgtc tcgctcgacg
      901 atgctgctga tggtgacgtc gccaatctta agggtgcgca tttcgcccgt tccccgtccg
      961 taatctcaac cccaatcgcg cctcgaagca ccggtatatt tcattcaggg ctctgcggaa
     1021 catcaaggac tttcccatat gtccattttt atgatgccga cgggcaaggg gcgaagggtt
     1081 atgagcagca aaatgagcat tccgcgtgat gcaattgtgt tcgttggcga cggccgcagg
     1141 gcgcgctgtt tctgcataat gccggcgatg agaaattccc caatctcaaa accgagcagg
     1201 tcttcgccga ccataatccc gcgacccctg accagggtac caacaagccg ggtcggctat
     1261 tcgcaaatgc gaactccggc cgccagcgcg gcgccgtaga gaccacggat tggcatgaac
     1321 tcgagtagct ccgcttcgcc cgcacgctgg ccgaagcgtt cgcaaagctg gtgcgcgtgc
     1381 gcaaagtgaa ggcagtcatt gttatggcgc cgccgcggac cttggcggag ttgcgtgacg
     1441 cattccatga tgacgtgaag agccgcaccg ttgcggaaat cgataaggag attaccaagc
     1501 acccggtcta cgagattaag aagcatttgg tcggatgatt gcggatgccg gcaagctgcc
     1561 gaccccagtg aacgttagat cagacgcggc caacttcaac gcaggccatg cttgccgagc
     1621 accttcacgg tgcttgcctg cggccccttc tc
//
LOCUS       DATILV010000963         4369 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2796966, whole genome shotgun sequence.
ACCESSION   DATILV010000963 DATILV010000000
VERSION     DATILV010000963.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4369)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4369)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4369
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2796966"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1342
                     /locus_tag="VLJ17_23195"
     CDS             <1..1342
                     /locus_tag="VLJ17_23195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009859392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSV25920.1"
                     /translation="KKGLAALKIEWEDGPHARLDTGAIVSELERATLDPGAVAQNIGD
                     AAQAMASAVTKVEAIYQVPFLAHATMEPMNCTVHVHKDGCEVWVGSQVLGRAQAAAAK
                     TAGLPLEKVVVHNHLIGGGFGRRLEVDGVIRAVEIAKHVDGPVKVVWTREEDIQHDMY
                     RPTFFDRMSAGLDAKGMPVAWNHRYAGSSVIARWAPPLFQNGLDPDTTEGAIHLTYAL
                     PNMHVEYLRVEPPVIPTAFWRSVGPSHNVFVVESFMDELAAAAKQDPVAYRRALLDNA
                     PRAKAVLELAAEKAGWGQPLADRAGRGVSVQFVFATYMAHVAEVEVSRSGAVRVRRVV
                     CAVDCGTVVNPDTVRAQIQSAIMFGITAALHGKITLKNGRVEQTNFDTYQILRINDAP
                     AIEVHIVQSSQPPGGMGEAGTSAIVPAVANAIFAATSKRLRKLPVDTAALKQSA"
     gene            1426..2385
                     /locus_tag="VLJ17_23200"
     CDS             1426..2385
                     /locus_tag="VLJ17_23200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020176654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HSV25921.1"
                     /translation="MDIAGLFARRNVLKATAVLGGLTFLSERTASAQVDQRNGESAIE
                     GRPDEVRMADIPLSSTAKFTVERRGQIVLIGINRPYIHNRVDPETFLGLARAYYQYDH
                     DPSLRAAVLFGHGDDFSRGIDVDAFQAAATSDRPRITGPGAIDPLARTEPILSKPLIA
                     VVHGDTWNMGHELYLTADIRVAAADTRFGQDENTHGRFPGGGATIRFVHEAGWGNAMR
                     YMLTGDHWSAEEALRMGTLQEIAPTRDKALEIGIKIAEKIAACGPLGIKTTLASAHLA
                     IDSSQAEALSKLTTQYGALYRTEDFKEGRKAEAEGRPPIYQGR"
     gene            complement(2525..2941)
                     /locus_tag="VLJ17_23205"
     CDS             complement(2525..2941)
                     /locus_tag="VLJ17_23205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020176926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HSV25922.1"
                     /translation="MRQAARYITQFYDRYLAAAGLRTTQYGILARLKRHGPMSINALA
                     AELVVDRTTLGRNIRPLERDCLIAIESDPSDGRSKILRLTKAGEARFQRAEKRWVLAQ
                     KRFEQVYGGRQASQLRESLRAVIASDLGSFDAMVAE"
     gene            3571..>4369
                     /locus_tag="VLJ17_23210"
     CDS             3571..>4369
                     /locus_tag="VLJ17_23210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013947957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSV25923.1"
                     /translation="MRRLIVLLLLAPALAACGQSQSQPQAATPPPPQVTIAKPVSKMI
                     ADQDEYVGRFVAVESVEVRARVPGYLDAIHFQDGQLVKAGDLLFTIDRRPFQIALAQA
                     QASLAQAKSTLAFAESDLARAQGLTVGAVITQQTFDQRTQAKRTAEASVAAQQAAERQ
                     AALDLEFTELRAPVAGRIGDRRVSIGNLVTGGTSGNTSLLATIESIDPIRFEFTLDEA
                     SYLRYGDFAKDGARAADRGLTVPVKLKLIGESAFYHEGKIDFVDNAID"
BASE COUNT          862 a         1382 c         1352 g          773 t
ORIGIN      
        1 gaagaaagga ttggcggccc tcaagatcga atgggaggac ggcccgcacg cgaggctcga
       61 tacgggcgcg atcgtgagcg agcttgaaag ggcgacgctc gatccggggg cggtcgccca
      121 gaatatcggc gatgccgcgc aagccatggc gagcgccgtc accaaggtcg aggcgatcta
      181 ccaggtgccg ttccttgcgc acgccaccat ggagccgatg aactgcaccg tccatgtcca
      241 caaggacggc tgcgaggtct gggtcggcag ccaggtcctg gggcgcgccc aggcggcggc
      301 ggccaagaca gcagggctgc cattggaaaa ggtcgtggtc cacaatcacc tgatcggcgg
      361 cggcttcggc cgccgactgg aggtcgatgg cgtcattcgc gcagtcgaga tcgccaagca
      421 cgtcgacggt cccgtgaagg tcgtgtggac acgcgaggaa gacatccagc acgacatgta
      481 ccggcccacc ttcttcgacc ggatgtccgc cggtctcgat gcgaagggaa tgccggtcgc
      541 ctggaaccat cgctacgcgg gctcctcggt catcgcgcga tgggcccctc cgctgttcca
      601 gaacggtctc gatcccgaca ccacggaggg cgcgatccat ctgacctatg cgctgccgaa
      661 catgcacgtc gagtatctgc gggtcgaacc cccagtcatt ccgacggcct tctggcgcag
      721 cgtcgggcct tcgcacaacg tcttcgtggt ggaaagcttc atggatgagc tggcggcagc
      781 cgcgaagcag gatccggtcg cctatcggcg ggccctcctc gacaacgcgc cgcgcgccaa
      841 agccgtgctc gagcttgccg cggaaaaagc cggctgggga cagccgttgg ctgaccgggc
      901 aggccgcggc gtctccgtgc agttcgtctt cgcgacttac atggcgcatg tcgccgaagt
      961 cgaagtgtcg aggagcggag ccgtccgggt ccggcgcgtc gtctgcgcag tcgattgcgg
     1021 caccgtcgtc aaccccgata ccgtccgggc acagatccag agcgcgatca tgttcggcat
     1081 cacggcggcc ctccatggca agatcacgct gaagaacggc cgtgtcgagc aaaccaactt
     1141 cgatacctac caaatcctgc gcatcaacga tgctccggcc atcgaggtcc acatcgtaca
     1201 gagttcgcaa ccgcccggcg gaatgggcga ggcggggact tcggccattg ttcctgctgt
     1261 cgccaacgcg atctttgcgg caacgagcaa gcgtttgcga aagctgccgg tcgataccgc
     1321 tgcattgaag cagtcggcat gagccaaatg cgatcacaac gcaccgggat ctgaatcatc
     1381 gagggcagct accggcgccg aagatcataa cgtggagtgc aagacatgga tatcgcgggc
     1441 ctgtttgcgc ggcgcaacgt attgaaggca acggcagtct tgggcggtct tacgtttctc
     1501 tccgaacgga ccgccagcgc ccaggtcgac caacgaaatg gcgagagcgc gatcgaaggc
     1561 cgtcctgacg aagtgagaat ggccgatatc ccactcagct cgaccgcgaa gttcacggtg
     1621 gagcgccgtg ggcagatcgt tctgatcggc atcaatcgcc catatatcca caatcgggtc
     1681 gatcctgaaa ccttcctcgg gctggccagg gcgtattacc aatatgacca tgatccttcg
     1741 ctgcgagcgg ccgtgctgtt cggacatggg gatgatttct ccaggggcat tgatgtcgat
     1801 gcctttcagg cagctgcaac atccgatcga cctcgtataa cgggtcctgg agccatcgac
     1861 ccgttggcca ggacggagcc catcctctca aagccactca tcgccgttgt gcatggcgac
     1921 acttggaaca tgggccacga gctctacctc accgcagaca tccgcgtagc cgcggccgac
     1981 acgcgcttcg gtcaagatga gaatacccat ggccgcttcc cgggtggcgg cgcgacgatc
     2041 cgattcgtgc acgaagcagg atggggaaac gccatgcgct acatgctgac cggggatcac
     2101 tggagcgctg aagaggcctt gcgcatggga acgctgcagg aaattgcccc tacccgcgac
     2161 aaggcgctgg agattggcat caagatagct gagaaaattg ccgcttgcgg gccactcggc
     2221 atcaaaacga cgttggcctc cgcgcatctt gcgatcgact cgtcgcaagc cgaagcgctg
     2281 tcgaaactca ccacccaata cggagctctc tacagaaccg aggatttcaa ggaaggccgc
     2341 aaggcagagg cggaaggtcg accaccgatt tatcaaggga ggtgatgcgg gcatccggcg
     2401 ccggcaaggt agccgatgga gtttagactc atcggagaac gccgcagact gcacggcgtc
     2461 aatgggcgag aacggccggt caaaggccgg ccgcctcttt gtccgtctgt cgcttcgtcg
     2521 ggacttattc cgctaccatg gcgtcgaacg agccgaggtc gctcgcgatg acggcgcgca
     2581 ggctctcgcg caactgcgag gcctgccggc cgccatacac ctgctcgaaa cgcttttgtg
     2641 ccagcaccca gcgcttttca gcgcgctgga agcgcgcttc gccggccttg gtcaggcgca
     2701 agatcttgct gcgcccgtcg gaaggatccg actcaatcgc gatcaggcag tcgcgttcca
     2761 ggggccgaat attgcggccc agcgtcgtgc gatccactac aagttcggca gcgagcgcgt
     2821 tgatcgacat cgggccgtga cgcttgagtc tcgcgaggat cccatactga gtcgtacgca
     2881 acccggcggc cgcaagatac cgatcataga actgtgtaat atagcgggcg gcctggcgca
     2941 cggcaaggca gttgcaatcg gcagaatttg gaagcgatct catggccatg ggcacccttc
     3001 gggcgacacg ccctacactc ttgcctggtt tgcgtgcata tacgcactct atgtcaatac
     3061 ccaaacccgg tgtgacaaca catccttctg ttcgggcaat ggtgtgctct cgaaccttgg
     3121 ctgtgctgcc ttgctgggcg tggtctcgag tctgcagctt ttcgggctgc agggcgcaat
     3181 agccgacacc attcatttct ccgagttgcc cggctcttga gccgaatggc acgaggatcc
     3241 ttcgcggcca ggcggcgtcg cgaacgacgg cggcgaaaat cgccagtttc gtcatgcatc
     3301 ctctgcaggc ctgtgcggcg atgcagcatg cgttgacaaa cgtgaatatg cgtccatcta
     3361 ggcgcatatg cgcgcatatc gacaaactct actcagacag gagaccgcag gggtggtccg
     3421 aggcgatgtt cggcgccgac cctcgttgga aatccgtgcg ctgcggcgcg gccccagtcc
     3481 atgaccagcg aacctcgcaa taggagtacc cagacgatga gcttgatgtc gccgctcacg
     3541 acgcctgcgt ttacgcccgt attgaaatca gtgcgccggc tgatcgtcct gctcctgctc
     3601 gcccccgcac ttgcggcctg tggacaaagc cagtcgcagc cacaagctgc cacgcccccg
     3661 ccgccgcagg tcaccattgc caagccggtg agcaaaatga ttgcggacca ggacgaatat
     3721 gtcggccgtt tcgtcgccgt cgagtccgtc gaggtgcggg cgcgcgttcc cggctatctg
     3781 gacgcgatcc atttccagga cggccagctg gtgaaggcgg gcgatcttct gttcacgatc
     3841 gatcgccggc ccttccagat cgctcttgct caagcccagg ccagcctcgc gcaggccaag
     3901 tccacgctcg cgttcgcgga aagcgatctg gcgcgcgcgc aaggccttac cgtcggcgcg
     3961 gtcattaccc agcagacctt cgaccagcgc acgcaggcca agcgcactgc cgaagcttcc
     4021 gtcgccgccc aacaggccgc ggagcgccaa gccgcgctcg acctcgaatt caccgagctg
     4081 cgcgcgccgg tggcggggcg catcggcgac cggcgcgtgt ccatcggcaa tcttgtcacc
     4141 ggaggaacgt cgggaaacac cagcctgctt gccaccattg aatcaattga tcccatccgc
     4201 ttcgagttca ccctggatga ggcctcctac ctgcgctatg gggacttcgc caaggacgga
     4261 gcgagagcgg ccgaccgcgg gttgactgta ccggtcaagc tcaagctcat cggcgagtcg
     4321 gcattttatc acgaaggcaa gatagatttc gtcgacaacg ccatcgacc
//
LOCUS       DATILV010000964         2664 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3559144, whole genome shotgun sequence.
ACCESSION   DATILV010000964 DATILV010000000
VERSION     DATILV010000964.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2664
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3559144"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..1707
                     /locus_tag="VLJ17_23215"
     CDS             1..1707
                     /locus_tag="VLJ17_23215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HSV25924.1"
                     /translation="MKARKGSLNWGIAALMGFATVSHLRAVVVLAAISLASFLPGFFE
                     IPPVDRDEPRFAQASKQMIETGDYIDIRFQDETRYKKPVGIYWLQVATVKIAEAAGVP
                     RARTRVGLYRIPSLIGAIGAVLLTYWAALAFVSRRAALMAGAMMATSILLGVEARLAT
                     TDAMLLLSAVAALGAMARAYLVEQGDRATGLSPLVNAAIFWSAIAVGILIKGPVILMF
                     VGFAAIVLVAADRSADWLLRLKPMVGVPWALALVMPWFLAILFRSGGNFFSDALGQDM
                     LAKVTGGQETHGMPPGYYFVAFWETFFPGAMLAGLAAPAVWRARTEPGCKILLAWIVP
                     SWIAFELVPTKLPHYVLPLYPAFAILIAGVIDSHALSHHRWLVRGTIWWFILMMVVAL
                     SLIALQIVVGQRLGLLTWSFAAAAVIFSLFAWLLYRVDGAEASLMRAAAASIMLSFAA
                     YGATIPGLRGLFPSVGLANYMHGANCIDPVAATAGFHEPSLVFLAGTNTNLSVGSSAA
                     DFLLGGPCRFAFVESRQERAFVQRADAIGLRYTTGPRIEGFNINSGQTVNIATYRSER
                     GP"
     gene            1704..2552
                     /locus_tag="VLJ17_23220"
     CDS             1704..2552
                     /locus_tag="VLJ17_23220"
                     /inference="COORDINATES: protein motif:HMM:NF025736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HSV25925.1"
                     /translation="MTASGGANTHEPGAAVARATAFRENIRAGLRTLLRRPRRLTPNF
                     VPAWQRVKIHSTIAIGAVVLSMLFLDTPGYQFAAGLPSWLVDVAYDITDFGRSGWILV
                     PVGTLMVLIAFLASPALDYMSRAVLAMAVVRLGYVFVAVGLPGLVSTVVKRWIGRVRP
                     SAFGPFAYEPFSWRPEYASFPSGHATTAFAALVAIGFVFPRVRPALWVYAVLIAASRV
                     MVCAHYPSDVIVGAAFGAFGALLVRDWFVARRLGFFVGRDGAVHTKAGPSLRRIKQVA
                     RVLVAS"
BASE COUNT          392 a          781 c          854 g          637 t
ORIGIN      
        1 ctgaaagcac gaaagggatc tttgaattgg ggaatcgcgg ccctgatggg ctttgcgacc
       61 gtttcccatt tgcgtgcagt tgtggtgctg gcggccatat cgctcgcatc attcctgccg
      121 ggctttttcg aaattccgcc cgttgatcgt gacgagccgc ggttcgccca ggcgagcaag
      181 cagatgatcg aaactggcga ctatatcgac atccgctttc aagacgagac gcgttacaag
      241 aagccggtcg gcatctactg gttgcaggtc gcaacggtga aaatagcgga ggctgccggt
      301 gtgccacgcg cccgaacgcg agtggggctt tatcggattc cttcgctgat cggtgccatt
      361 ggggccgtat tgctgaccta ttgggccgca cttgccttcg tatcgcgacg ggcggcgctg
      421 atggccggtg ccatgatggc gacttcgatt cttctcggcg tcgaagcgcg cctcgccacg
      481 accgatgcaa tgttgctgct gagcgcagtg gcggcattag gcgcgatggc gcgcgcctat
      541 ctggtggagc agggcgatcg tgcgaccggc ctatctcctt tggtcaacgc cgcaatcttc
      601 tggagtgcga tcgcggttgg aattctgatc aagggaccgg tgatcctgat gttcgtggga
      661 ttcgccgcca ttgtgcttgt ggcggcagat cgatctgcag attggttgtt gcggctcaaa
      721 ccaatggtcg gcgtgccctg ggcgctcgca ctggtgatgc cctggttcct cgccatcttg
      781 tttcgcagcg gcggtaattt cttttccgac gcgctcggcc aggacatgct cgctaaggtg
      841 acgggcggcc aggaaaccca tggtatgccg ccgggatatt atttcgtggc attctgggag
      901 accttttttc caggcgccat gctggccggt cttgcggcgc cggcggtgtg gcgcgcacgc
      961 accgaacccg gctgcaagat tctgctcgcc tggatcgtgc catcctggat cgcattcgag
     1021 ctggtgccga ccaagctgcc gcattacgtt ctgccgctct atccagcgtt tgccatcctg
     1081 attgcgggtg taattgacag ccacgccctt tcgcaccatc gctggctggt gcgcggaacc
     1141 atttggtggt tcattctaat gatggtggtg gcgctgtctc tgattgcact gcaaatcgtc
     1201 gtcggccaac ggctgggcct cttgacgtgg tccttcgcag ccgcggccgt gatcttttcg
     1261 cttttcgctt ggctcctcta tcgtgtcgac ggcgccgaag cgtcgcttat gcgcgccgcg
     1321 gcggcgtcga tcatgctctc tttcgctgcc tatggggcaa ccattccggg cttgcgtggg
     1381 ttgttcccgt cggtggggct cgcgaattac atgcacggcg ctaattgcat cgatccggtc
     1441 gcagcgacgg ccgggtttca cgaaccgagc ctcgtttttc tcgccggtac caacaccaac
     1501 ttgagcgtgg gctccagcgc tgcggatttt ctgctcggtg ggccatgtcg atttgcattc
     1561 gtcgaaagcc gtcaagagcg cgctttcgtg cagcgcgccg atgcgatcgg cctgcgctac
     1621 acgacagggc ctcgcatcga gggcttcaac atcaatagcg gccagacggt gaatattgcc
     1681 acttaccgtt cggagcgtgg cccatgactg cgtccggcgg ggccaatacg catgagccgg
     1741 gcgccgctgt ggcgcgcgca acggcgttcc gtgaaaatat tcgtgccggc cttcgcaccc
     1801 tgctgcgccg gccgcggcgg cttacgccga acttcgttcc ggcgtggcaa cgcgtgaaaa
     1861 tccatagcac gattgcgatc ggcgcggtgg tgctctcgat gctgtttctt gacacgcccg
     1921 ggtaccaatt tgctgccggg ctgccgtctt ggctggtcga tgtcgcctat gacatcaccg
     1981 attttggtcg ctccggatgg attctggtgc ccgtcggaac attgatggtg ctgattgcat
     2041 tcctcgcctc accggcgctc gactacatgt cgcgtgcggt gcttgccatg gcggtcgtac
     2101 gtctcggcta tgtattcgtg gcggtcggcc tgccggggct tgtgagcacg gtggtgaagc
     2161 gatggatcgg tcgggtgcgg ccgtccgcct ttggaccgtt cgcctatgag ccgttttcgt
     2221 ggcggccaga atatgcgagc ttcccgtccg gccatgcgac gaccgcattc gcggcactgg
     2281 ttgcgatcgg ctttgtgttt ccccgtgtcc gccccgcgct atgggtttat gcggtgctca
     2341 ttgcggctag ccgggtgatg gtttgcgcgc actatccgag cgatgtgatt gtcggcgcgg
     2401 cgttcggagc gttcggggca ttgttggtgc gcgactggtt tgtcgcacgt cgacttggtt
     2461 ttttcgtcgg ccgagatggc gcggttcaca ccaaggcagg tccgtcgcta cggcggatca
     2521 aacaggttgc ccgcgtgctc gttgcctcat aaaacgcgcg tgcacgcgcg gatcatccgt
     2581 caccccgggt catccatcct gttaatttcg tcgcgtttcc tgccgggccg gaattcgcga
     2641 cagcggaaga tgccggacgg caga
//
LOCUS       DATILV010000965         2802 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2540546, whole genome shotgun sequence.
ACCESSION   DATILV010000965 DATILV010000000
VERSION     DATILV010000965.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2802)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2802)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2802
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2540546"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..962)
                     /locus_tag="VLJ17_23225"
     CDS             complement(<1..962)
                     /locus_tag="VLJ17_23225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HSV25926.1"
                     /translation="MDIFVLLATMFTCFVIGVPIAYALALAAIAGALWIGIPLEAMML
                     KISDGVSKVAMLTIPFFVLAGAIMAEGGMARRLVAFADVLVGFTRVRGGLSVVNVLAT
                     TFLSGISGSSVADTSAIGSVMIPQMEKVGYPRVFATNVTITASVQALLVPPSHNAVIY
                     SLATGGSISIISLFMAGVMPGLLLGFSIMILCLVIAYRDGHPRGQTVPLRDAVKITFD
                     ALWGLITLAIILGGILLGVFTAIEAGAVACVWAFFVTMFIYRDYRWRDLPVLLHRTLR
                     TVAMVMTLIACASSVGYVMALTQMPGKITAFFLTISSDKNVILFL"
     gene            complement(965..1561)
                     /locus_tag="VLJ17_23230"
     CDS             complement(965..1561)
                     /locus_tag="VLJ17_23230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HSV25927.1"
                     /translation="MPAVPGHAMIPTYRQAMDALYLACVLIASSALVLISAVIPWAVY
                     TRYVLNRAASWPEPMAVLLTIVLTFFGAAACYRNRLHMNVSFFVAMLPPRLRRVVDLI
                     AELLVGLFALFMVIWGVKLVEATWHNTIADFPALSVGVTYLPIPLGGAILLLFVIEHV
                     SGGQRTDDGGQMVDDGQRRTEIIPENQPSVIRPLSSDI"
     gene            complement(1718..2716)
                     /locus_tag="VLJ17_23235"
     CDS             complement(1718..2716)
                     /locus_tag="VLJ17_23235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HSV25928.1"
                     /translation="MRLQAAVGGLVGVVALSAFTSLSGMAVAQQKLALKASDVHPAGY
                     PTVVAIENLGKKLEKATNGRLSVQMFAAMQLGGEKEAIEQAQVGAIQIARVSVGALGP
                     VIDDLNVFNLPFLFRNTAHMQKVIDGPIGQELLDKVTGNRNAGLVALAWMDAGARSVY
                     DTKKPIRNIADLKGLKVRVMGNPMFVDMMNALGGNGVAMGYDQVFSALQTGVVDGAEN
                     NPPSFVFDNHYQVAKFYTLTEHLIVPEIVVFSRRTWDTLPKDDQELIRKFSREAQSEE
                     RVLWTAYETEAMGKATAAGIQVFDVADKKPFQDAVKPVWDKYGPRFADIIKRIQAE"
BASE COUNT          590 a          875 c          849 g          488 t
ORIGIN      
        1 aggaacagga tcacgttctt gtcgctggaa atggtcaaaa agaacgccgt gatctttccc
       61 ggcatctgcg tgagtgccat gacgtagccg acgctcgagg cacaggcgat cagcgtcatc
      121 accatcgcca ccgtccgcaa ggtccgatgc aaaagcacgg ggagatcgcg ccaacgatag
      181 tcgcgataga tgaacatcgt cacgaagaag gcccagacgc aggcgaccgc gcccgcctcg
      241 atcgccgtga acacgccgag caaaataccg cccaggatga tcgccagcgt gatcaagccc
      301 cacagcgcat cgaacgtgat cttgacggcg tcgcgcagcg gcaccgtctg gccgcgtgga
      361 tgaccgtcgc gataggcaat gacgagacac aggatcatga tcgagaagcc gagcagcagg
      421 cccggcatca cccccgccat gaacaggctg atgatcgaga tcgagccgcc ggtcgcgagc
      481 gaatagatga ccgcgttgtg gctcggcggc actaggaggg cctgcaccga cgccgttatg
      541 gtgacattag tggcaaacac gcgcggatat ccgaccttct ccatctgcgg gatcatcacc
      601 gagccgattg ccgaagtgtc ggcgaccgaa gaccccgaga tgccggatag gaacgtggtc
      661 gccagcacat tcaccaccga gagcccgccg cgtacccggg tgaaaccgac cagcacgtcc
      721 gcaaaagcga ccagccgccg cgccatgccg ccctccgcca tgatggcgcc ggcgagcaca
      781 aagaacggaa tggtgagcat ggcgaccttg ctcaccccat cggagatctt cagcatcatg
      841 gcttcgagcg gaatgccgat ccagagggcc ccggcgatgg cggcaagcgc cagcgcatag
      901 gcgatcggca cgccgatcac gaagcatgtg aacatggtcg ccagcagcac gaagatgtcc
      961 atggtcagat gtcagatgac agaggacgga tgacagaggg ctgattctca gggataattt
     1021 ccgtcctccg ttgtccgtca tccaccatct gtcctccgtc gtccgtcctc tgtcctccgc
     1081 tcacatgctc gatgacgaac aacaacagga tggcaccgcc aagcgggatc ggcaggtagg
     1141 tgacgccgac cgagagcgcc ggaaagtccg caatggtatt gtgccaggtg gcctcgacca
     1201 gcttcacgcc ccagatcacc atgaatagag cgaacagccc caccagcagc tcggcgatca
     1261 gatcaacgac gcggcgtagg cgcggtggca gcatggcgac gaagaacgat acattcatgt
     1321 gcagccggtt gcggtaacac gccgcggcgc cgaagaaggt gagcacgatc gtgagcaaca
     1381 ccgccatcgg ttcgggccac gatgccgctc gattgagcac gtaacgcgta tagaccgccc
     1441 acgggatgac ggcggaaatc agcaccaaag cgctgctggc gatgagcaca caggcaaggt
     1501 agagggcgtc catcgcctgg cggtaggtgg ggatcatggc gtgacctggg accgcgggca
     1561 tctcgcccgc attctaagaa cgaaagcacg ggcaagacgc gccgccattt cccttcccgt
     1621 cttcgggagg gttagggtgg ggtcttgctt caaccgacgc cgcgccgtgg caatgggcgc
     1681 gcctcggccc tccccgaaaa acagggcggg agaagaatca ctctgcctgg atgcgcttga
     1741 tgatgtcggc aaagcgcggg ccgtatttgt cccacactgg cttcacggcg tcctggaacg
     1801 gcttcttgtc ggcgacatcg aacacctgga tgccggcggc tgtggccttg cccatcgctt
     1861 ccgtctcgta ggccgtccac aagacgcgct cttcgctctg tgcctcccgc gaaaacttgc
     1921 ggatgagttc ctggtcgtct ttcggaagcg tgtcccaggt tcgtcgcgaa aacacgacga
     1981 tctctggcac gataaggtgc tcggtgaggg tgtagaattt ggccacctgg taatggttgt
     2041 cgaacacaaa gctcggcggg ttgttctcgg cgccatcgac gacaccggtt tgcagcgcgc
     2101 tgaacacctg atcatacccc atggcgacgc cgttgccgcc gagcgcgttc atcatgtcga
     2161 cgaacatcgg attgcccatg acacggacct tgaggccctt gaggtcggca atgttgcgga
     2221 tcggcttctt ggtgtcgtag acgctgcgtg cgccggcatc catccaggcg agcgcgacca
     2281 gcccggcatt gcggttgccg gtcaccttgt cgagcagttc ctggccgatc gggccgtcaa
     2341 tcaccttctg catgtgcgcg gtgttgcgga acagaaacgg caggttgaag acgttgagat
     2401 cgtcgatcac gggcccgagc gcgccgacgc tgacgcgcgc gatctggata gcgccgacct
     2461 gggcctgctc gatcgcctcc ttttcgccgc cgagttgcat cgccgcgaac atctgcacgc
     2521 tcaagcgccc gttagtcgcc ttttcgagct tcttgccaag gttctctatg gctaccacgg
     2581 tggggtagcc ggccggatga acgtccgaag ctttgagagc cagtttctgc tgcgcgaccg
     2641 ccataccgct aaggctggtg aacgcactga gcgctacaac tcccacaagg ccaccaacgg
     2701 ctgcttgcaa tctcatgaat tcctcccaca atcgccgtat ctgccgcgac tggatggcgg
     2761 acgtaatcgc ccaaacacca cgtgttcgtt accaagtcat at
//
LOCUS       DATILV010000966        17915 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1776205, whole genome shotgun sequence.
ACCESSION   DATILV010000966 DATILV010000000
VERSION     DATILV010000966.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 17915)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17915)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17915
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1776205"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1484)
                     /gene="bamA"
                     /locus_tag="VLJ17_23240"
     CDS             complement(<1..1484)
                     /gene="bamA"
                     /locus_tag="VLJ17_23240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HSV25929.1"
                     /translation="MSVRLGRGRVARISVAAGLVCAGLFGSIVASVGTAGVSVAQSTQ
                     TRIDVEGNRRVEADTIRSYFRVGGSERLDSAKIDSALKALYATGLFQDVRITPGNGRI
                     LVTVVENPVINRIAFEGNKKVKDEQLSAEVQSKARGTFSRATVQNDVQRIIEIYQHSG
                     RYDVRVEPKVIELPNGRVDLVFEVTEGVKTGVEKIIFVGNSAYSDYRLRDVIKTGVTN
                     WLSFLKSNDIYDPDRIEVDRDLLRRFYLRNGFADVRIVSAVGEYEPQNKGFIITFTID
                     EGVQYHFGAVNIQSSVPSVPGESLRYKLRVESGRVYNADAIEKSVEEATIEVAKRGYP
                     FAAVRPRGERNVANRTVDVTFVVDEGPHTYIERINIKGNTRTRDYVIRREFDIVEGDP
                     YNRALLDRAERRIKNLGYFKTVKITNEPGSAPDRIIVNCEVEEQSTGEFSFAGGYSTS
                     DGIIGEVSLGERNLLGRGQMAKVAVQYGQRARGFDLSFVEPYFL"
     gene            complement(1626..2753)
                     /gene="rseP"
                     /locus_tag="VLJ17_23245"
     CDS             complement(1626..2753)
                     /gene="rseP"
                     /locus_tag="VLJ17_23245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HSV25930.1"
                     /translation="MGSNVFSSLGALGGSYTNWIIPFLFTLTVIVFFHELGHFLVARL
                     CGIKVLVFSIGFGPELVGFYDRRGTRWKISAIPLGGYVKFFGDENEASVPDAATLAAM
                     TEEERKQSFPGQPVYARAAVVAAGPITNFILAVVLFAGVFMAYGKTTAIPRIAAVEPN
                     SPAAAAGFKVGDVIVSIDGSKIDNFGDVQRIVNFSPGSTLTIEVDRGGALITLKAIPA
                     ERDKKGMLGITRSNEPGDIRTDPVGAAEALLLGADKTWFVVQTTFTYLRDVVVGRQSA
                     DQIGGPIKIAQISGEVAKLGFGPLLDLTALLSVSIGLLNLFPIPLLDGGHLLFYSIEA
                     IRGRPLSERAQEVGFRIGLAIVLMLMIFAAFNDLRPYITRS"
     gene            complement(2791..4014)
                     /gene="dxr"
                     /locus_tag="VLJ17_23250"
     CDS             complement(2791..4014)
                     /gene="dxr"
                     /locus_tag="VLJ17_23250"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0030604 - 1-deoxy-D-xylulose-5-phosphate
                     reductoisomerase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HSV25931.1"
                     /translation="MSIVPIAHAEAASRAGEMSITLLGATGSIGTSTIDLVRSQRDRF
                     RVEAVTAQRNAEALAHLARELRAKFAVVAEPDCYGELEDALAGTGIEAAAGAEAVVEA
                     AQRPADWVMAAITGAAGLRPTMTAIERGATVALANKECLVCAGTLFMQRAATTGAIVL
                     PVDSEHNAIFQALSAGRRDDVSRIILTASGGPFRTASLAEMRAATVHQALQHPNWSMG
                     AKITIDSATMMNKGLELIEAHYLFGFGSGQIDIVVHPQSIVHGIVEYRDGSMIAQLGP
                     PDMRVPIANCLAWPERMPGAARLDFKQMAMLTFEPPDPVRFPALVLAREALVAQNGAP
                     TVLNAANEIAVHAFIGGRLGFAGIAALVEATIENAQGRGIMREPVDVDDAIAVDHSSR
                     SLAQSLLPEIAGRAI"
     gene            complement(4031..4870)
                     /locus_tag="VLJ17_23255"
     CDS             complement(4031..4870)
                     /locus_tag="VLJ17_23255"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HSV25932.1"
                     /translation="MNEAVPTSSKSTGELGKRIVSGIVMAVLAAGAVVLGGWPFVLFW
                     TAAALGIFWEWSAIVTGGGAAVRAAGGAALVVAALAAGAGQLYAAFMVLAAGVAGVAG
                     MCPPHRRAWGAAGVAYAGTVLLAPLALRRDREFGLVAILFLFAIVWATDILGYFIGRA
                     IGGAKLAPRISPKKTWSGACGGAVGALVSGAAVVYVGTNAALLPAVCVALVLSIVSQA
                     GDLFESAVKRRFGVKDAGHMIPGHGGLMDRLDGFIVAAGVAALIGLMRGGPDTPARGL
                     LLW"
     gene            complement(4875..5648)
                     /locus_tag="VLJ17_23260"
     CDS             complement(4875..5648)
                     /locus_tag="VLJ17_23260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HSV25933.1"
                     /translation="MPEASASPKARDAAAPDSSFEPPRHVAIIMDGNGRWAAERGLPR
                     GEGHRRGVEALRRVVRAVGELGIEILTIYSFSSENWSRPVTEIRDLMGLLRRFIRNDL
                     AELHKNNVRVRIIGGRQGLEPEIERLLEEAEELTKNNHGLLLVVAFNYGGRQEIARAA
                     QRIASSVVAGTLCPGDITADVIGRHLDAPDLPDPDLLIRTSGEQRLSNFLLWQLAYSE
                     LVFVPTYWPDFDRTTLENAIAEYRRRERRFGGLKARAGS"
     gene            complement(5678..6241)
                     /gene="frr"
                     /locus_tag="VLJ17_23265"
     CDS             complement(5678..6241)
                     /gene="frr"
                     /locus_tag="VLJ17_23265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008135 - translation factor activity, RNA
                     binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HSV25934.1"
                     /translation="MATANYDLNEVKRRMQGAVQVLKQELGGLRTGRASPGMLDPVQV
                     DAYGTHMPLNQLATISVPEPRLLSVQVWDKSMVHAVEKAIINSNLGLNPATEGQVLRL
                     RIPELNQERRKEMVKVAHKYAEAARVAVRHVRRDALDLLKKLEKDGKISEDDHTRMSG
                     EVQKATDQVVTEVDQTLAGKEKEIMTV"
     gene            complement(6420..7127)
                     /gene="pyrH"
                     /locus_tag="VLJ17_23270"
     CDS             complement(6420..7127)
                     /gene="pyrH"
                     /locus_tag="VLJ17_23270"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033862 - UMP kinase activity [Evidence
                     IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HSV25935.1"
                     /translation="MPRYRRVIVKLSGEALSGPEMFGIHQPTVDRFAADIAAARRRGI
                     TIGVVVGGGNVLRGVEVAAQGVSRPTGDAMGMLATVMNALVLEAAIERAGAPARTMSA
                     LTMPQVCETYERARAMRHLDDNRVVVFAGGTGNPFFTTDTTAVLRAAEMRCDAVLKAT
                     NVDGVYTADPKQDPTAKRYDRLTHEEAFRRELKVMDATAFALARENRTPIIVFSILEP
                     GAIEAVLSGSGRATIVE"
     gene            complement(7151..8071)
                     /gene="tsf"
                     /locus_tag="VLJ17_23275"
     CDS             complement(7151..8071)
                     /gene="tsf"
                     /locus_tag="VLJ17_23275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008131343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HSV25936.1"
                     /translation="MANVSAQMVKELRDKTGAGMMDCKAALGETKGEMEAAVDWLRKK
                     GLAKAAKKAGRVAAEGLIGVAVRGPKGVVVEVNSETDFVARNEQFQGLVRMIANVALD
                     VGADVEAIKAGKVGNLTVDDAINAAIATIGENMSLRRAAEVSIKTGAIGTYVHNAVSE
                     GLGKIGVIVGLESPGQKDELTVLGRQIAMHIAASNPQAVDPGGLDPQVVAREKDILAD
                     KFRAQGKAEPVIAKIVESGLKTFYKEVCLLEQPYIHDPAKTVTQALKEAEGKVGGAIK
                     VTGFVRYALGEGIDRPDSDFGGEVAAMAGR"
     gene            complement(8133..9128)
                     /locus_tag="VLJ17_23280"
     CDS             complement(8133..9128)
                     /locus_tag="VLJ17_23280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HSV25937.1"
                     /translation="MALPEYSMRQLLEAGVHFGHQSHRWNPKMKDFIFGARNNIHIID
                     LAQTVPMLHRALSAVSDTVAKGGRILFVGTKRQAQDAVSQAAKKSAQYYVNSRWLGGT
                     LTNWKTISESIKRLRRLEELLSAGEAHGYTKKERLTLTRERDKLDRALGGIKDMGGLP
                     DLVFVIDTNKEDIAIKEARRLNIPVAAVVDTNCDPDGITFVVPGNDDAGRAISLYCDL
                     IAKAAIDGISRAQGELGIDIGAAEEPIAEVVQAEKTDGLGFEALSGPRGVADDLKKLS
                     GVSPTIEKKLNDLGIFHYWQIAGLGPTAAHNVGEEVGLPGRVDGWIAQAKELGAE"
     gene            complement(9402..11363)
                     /locus_tag="VLJ17_23285"
     CDS             complement(9402..11363)
                     /locus_tag="VLJ17_23285"
                     /inference="COORDINATES: protein motif:HMM:NF025214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV25938.1"
                     /translation="MANIKDAIDLHRQGRLGEAESKCHSILARDPRHFEALMILGLIR
                     LQQRTPAEARQFLEQAVAIRPQSVEALSNLAFVLLILGLPIETLATCDRVLVLAPNHV
                     ETLVTRGNALFRSNRLDEARASYNQALKIDDRNMEALIGQGAVLARLGRIDESVATFE
                     RIPIGQNPANLHKRANLLQSLGLLGAAARDFQNLALFPSHALAGWVGLMTCAQESCDW
                     AQVAQARQRVLAAVNAGQRVDPLLVLRISSDPAEHLKAARNAAPRIAAARLTRVPAVG
                     RPARLRIAYVSPDFRIHPLAYLIPELLERHDRTRFEVIGVSLGPPDDSDVRGRIVRAF
                     DGFHDMHARSDEDIVRLTRQLEIDVVIDLAGYTEHSRPGILARRVGSVQASYLGYCGT
                     SGANFVDYLLVDRIVAPPEEQGFFTERLVYLPDSFMVGDSTQTISQATPSRRECGLPD
                     HGFVFCCFNKNYKITQSMFDLWMRLLRSVEGSILWLSDNRGQGQEKLRNHAAAQGVDP
                     QRLVFAPALPARVDHFARHRLANLFLDTHPYNAHTTASDALFAGLPVLTLMGPTFVGR
                     VAASMLRAIGLGELVTETPEGYEALALDLARNPSRMQALRAKLVTNRSTWALFDTDRF
                     RRNIERAYDQMFEIYRRGEMPQSFDVVGE"
     gene            complement(11429..11545)
                     /locus_tag="VLJ17_23290"
                     /pseudo
     CDS             complement(11429..11545)
                     /locus_tag="VLJ17_23290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611079.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(11660..13132)
                     /gene="gatA"
                     /locus_tag="VLJ17_23295"
     CDS             complement(11660..13132)
                     /gene="gatA"
                     /locus_tag="VLJ17_23295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HSV25939.1"
                     /translation="MSQLTALTVAQARDLLRKREFSAVELTEAHVAAAKEARALNAFA
                     LETPERAHEMAARADTALAKGEGGPLAGVPLGVKDMFATKGVRTTACSHILDTFVPTY
                     ESTVTANLWRDGAVMLGKLNNDEFAMGSSNETSCFGPVVSPWRRNGSDMRLVPGGSSG
                     GSAAAVAANTCLGAVGTDTGGSIRQPAAFTGIVGIKPTYGRCSRWGIVAYASSLDQAG
                     PFARTARDAAILLRSMAGYDPKDTTSVDVAVPDYEAALTRSVKGMKIGIPKEYRVKGM
                     SDSIEALWRRGADWLKAAGAEIVEVSLPHTKYALAAYYIVAPAEASSNLARYDGVRYG
                     LRAGGRDIIDMYEQTRAAGFGKEVRRRIMIGTYVLSAGYYDAYYLRAQKVRTLIKRDF
                     EDCFRAGANAILTPTTPSAAFAIGEKSADPIEMYLNDVFTVTVNMAGLPGISVPGGLD
                     AQGLPLGLQLIGRPFDEETLFSLGAVIEAAAGRFIPQKWW"
     gene            complement(13455..13673)
                     /locus_tag="VLJ17_23300"
     CDS             complement(13455..13673)
                     /locus_tag="VLJ17_23300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25940.1"
                     /translation="MAMCDECEEFPAQYVAYFNKAGGKFWRPAQKAATRPWAIDIRPV
                     EPVPVVVREVRLFTCDEPSARPAQERVV"
     gene            complement(13702..13989)
                     /gene="gatC"
                     /locus_tag="VLJ17_23305"
     CDS             complement(13702..13989)
                     /gene="gatC"
                     /locus_tag="VLJ17_23305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HSV25941.1"
                     /translation="MSVDTATVRRIAHLARIAVKEDEVEHLKGELNDMLAFVEQLSEV
                     DVAGVEPMTSVIPMVMKKRPDVVTDGEIADDIVKNAPATQDHFFLVPKVVE"
     gene            14233..14394
                     /locus_tag="VLJ17_23310"
     CDS             14233..14394
                     /locus_tag="VLJ17_23310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011969465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Thivi_2564 family membrane protein"
                     /protein_id="HSV25942.1"
                     /translation="MSLLISVLITFVVVVLVLYLVNLLPVDRRARQIVRVIVIIIGVL
                     SLLRHLQVY"
     gene            complement(15010..17328)
                     /locus_tag="VLJ17_23315"
     CDS             complement(15010..17328)
                     /locus_tag="VLJ17_23315"
                     /EC_number="1.1.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004470 - malic enzyme activity [Evidence
                     IEA];
                     GO_function: GO:0004471 - malate dehydrogenase
                     (decarboxylating) (NAD+) activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent malic enzyme"
                     /protein_id="HSV25943.1"
                     /translation="MATKVSDDLKASALAYHRMPRPGKLTIQATKPLATQHDLALAYT
                     PGVAVACEAIAADPAEAAALTARANLVAVVTNGTAVLGLGDIGPLAAKPVMEGKAVLF
                     KKFADIDVFDIEIDAKDVDRIVDVVAALEPTFGGINLEDIKAPECFEVEARLQERMKI
                     PVFHDDQHGTAIIVAAAVKNALFLTGKTIDKVKIVTSGAGAAALACLNLLVSLGARHE
                     NIWVTDIEGVVYEGRAALMDRWKRVYAQNTDKRQLADVIEGADIFIGLSAPGVLKPEM
                     AARMASRPLIMALANPTPEIMPDEALKARPDALICTGRSDFPNQVNNVLCFPYIFRGA
                     LDVCATSINEAMKIAAVEAIAALARETPSEVAARAYGGEAPTFGVGSLIPNPFDPRLI
                     LRIAPALAEAAMKSGVATRPIADIARYRERLNAFVFRSGFIMKPLFTKAKTDPKRVVY
                     AEGEDERVLRATQVVVEEGLAKPILIGRPAVIETRLKRFGLAIRPERDFALTNPQDDP
                     RYRQYVDLYVEAAGRRGVTPDAARTLMRTNATVIAACMVRAGDADAAICGVEGGYMSH
                     LRHVRDVIGCAPGVGEFAALSLIITGKGHFFVSDTQVRCDPSAEEVVEMAVLAAAHVR
                     RFGLEPKIALVSHSNFGTSDSPSSRKMRRATAMLRDMKVDFEVDGEMHADTALDPAQR
                     QRTYPHSRLNGQANVLIFPNLDAANIAYEAIRVLADALPVGPILIGAARPAHVLTPSV
                     TARGIVNMTAVAVVEAQACRAHSSQGRRLAGA"
     gene            complement(17435..17815)
                     /locus_tag="VLJ17_23320"
     CDS             complement(17435..17815)
                     /locus_tag="VLJ17_23320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25944.1"
                     /translation="MSQVLPEPTILPILITNVLGLLLLMMLYFFGVWSRSYILPADRG
                     LSIKRQLVAAVPVGFITMGLYAKSAFPGIHIEGTGVFDLAIMMGYAIFLGMLSRESLE
                     KILGEAKTNPAGVGGVNIPLPPTP"
BASE COUNT         3481 a         5729 c         5283 g         3422 t
ORIGIN      
        1 tcgaggaaat agggttcaac gaacgaaaga tcgaagccac gcgcccgttg cccatactgc
       61 accgccacct tcgccatctg cccgcgtcca agcagattac gctcaccgag cgacacttcg
      121 ccaatgatgc catccgacgt cgagtaaccg cctgcgaatg agaattcgcc cgtggattgc
      181 tcttcgacct cgcaattgac gataatgcga tcgggcgcgg aaccgggttc gttggtaatc
      241 tttaccgtct taaagtagcc taaattcttg atccgccgct cggcgcggtc caacagcgcc
      301 cgattgtatg gatcgccctc gacgatgtcg aactcacggc gaatcacata gtcccgggta
      361 cgggtattcc ctttgatgtt gatgcgttcg atataggtgt gcggcccttc gtcaaccacg
      421 aacgtaacat cgacggtgcg gttcgcgacg ttgcgctcgc cacgcggccg cacggcagcg
      481 aacggatagc cgcgcttcgc cacctcaatg gttgcctctt ctaccgactt ctcgatggcg
      541 tcggcattgt agaccctgcc ggactcaaca cgtagcttgt agcgcaacga ttcccccgga
      601 accgacggaa ccgacgactg aatgttaacc gcaccgaaat gatattggac gccttcatct
      661 atggtgaagg tgatgatgaa gcccttgttc tgcggttcgt attcaccgac ggccgacacg
      721 atgcgcacat cggcaaagcc gttcctgaga tagaagcgcc gtagcaaatc acggtcgacc
      781 tcgatccggt cggggtcata aatgtcattc gatttcaaga agctaagcca attggttacg
      841 cccgtcttga taacgtctct gaggcggtaa tccgaatagg cactgttgcc gacaaagatg
      901 atcttctcga cgccggtctt gaccccctcg gtgacttcga aaacgagatc aactcggccg
      961 ttcggcagtt caatgacttt cggttcgacc cgaacgtcat agcgcccgct gtgctggtaa
     1021 atctcaatga ttcgctgcac gtcgttctga accgtggcgc gtgaaaatgt cccgcgcgcc
     1081 ttggactgaa cctcggccga aagttgctcg tccttcacct tcttattgcc ttcaaaggca
     1141 atacggttaa tgaccggatt ttccacaacg gttacgagaa tccggccgtt accgggtgtg
     1201 atccgaacat cctggaaaag gccggtggca taaagcgctt taagcgcgga atcgatcttg
     1261 gccgaatcca gccgctcgct tccgccgacc cggaaatagg agcgaatcgt atcggcctca
     1321 acgcggcgat tgccttcaac atcaatgcgc gtctgggtag attgcgcaac gcttactccg
     1381 gcggtcccga ccgaggccac gatagaccca aacaggccgg cacacaccaa cccagcagcg
     1441 acgctgatcc tcgccacacg tccccgcccc aagcgtacgc tcattcccat ccccaacgca
     1501 tccccatatt cccagcaccc aatcaaggat ccctaactgc tttttacagc ctttcccccc
     1561 ctctgcaaac agagacttcc gccttgttcc cgtttgcttt catgatgttg cgccccagcc
     1621 actggtcacg acctggtaat gtagggacgc aaatcgttaa acgccgcaaa gatcattaac
     1681 attaagacga tagcaaggcc gatccggaat ccgacctcct gggcccgttc agatagcggt
     1741 cgaccgcgaa tagcctcgat cgagtagaac aaaaggtgac cgccatcgag tagtggaatc
     1801 ggaaacagat tgaggagccc gatcgaaacc gacagcaacg ctgtcaggtc aagtaacggg
     1861 ccaaatccga gcttggccac ctccccggaa atctgcgcga tcttgattgg accgccgatc
     1921 tggtcggccg attgccgccc caccacaacg tcgcgaagat acgtaaaggt ggtctggacc
     1981 acaaaccaag tcttgtcggc ccccagcaac agcgcctccg ccgcgccgac cggatcggtc
     2041 ctgatgtcgc ccggttcatt cgaacgtgtg atcccgagca tccccttctt gtccctttcg
     2101 gccgggatag ccttcaacgt gatcaacgcc ccgccgcgat cgacttcgat cgtcaaagtc
     2161 gaaccaggac tgaaattgac gattcgttgg acatcgccaa aattgtcgat cttgctacca
     2221 tcgatcgaaa cgatgacatc gccgaccttg aagcccgcgg ccgcggcggg gctatttggt
     2281 tcgacggcgg caatccgggg tatcgcagtc gtcttgccgt aggccatgaa aaccccagca
     2341 aaaagaacga ccgcaaggat gaaattggta atcggcccag ccgccacgac agccgcccgg
     2401 gcatacacag gctggcccgg aaaactctgt ttgcgctctt cttctgtcat cgccgccagc
     2461 gtggccgcgt ccggcacact ggcctcattt tcatcgccaa agaacttgac ataaccgccc
     2521 agcggaatcg ccgagatttt ccatcgggta ccccgtcgat cgtaaaagcc gaccagttcc
     2581 ggtccgaacc cgattgagaa cacaagcacc ttgataccgc agagacgcgc gactaaaaaa
     2641 tgcccaagct catgaaaaaa cacgataacc gttagtgtga acagaaacgg aatgatccaa
     2701 ttcgtgtagc tgccgccgag ggcacccaga gaggaaaata catttgatcc catcggtaag
     2761 cctcattccg tttcgaagtc accaccgctc ctaaatcgcc cttccggcga tttccggcaa
     2821 gaggctctga gctaacgatc tagagctatg gtcaaccgca atggcgtcgt ctacatccac
     2881 cggctcgcgc ataatgccgc gcccctgtgc gttctcgatg gtcgcctcta ctagggcggc
     2941 aattccagcg aaaccaagac ggccacctat gaaagcatgg accgcgatct cgttggctgc
     3001 attcaacacc gtaggggctc cattttgtgc caccagggcc tcgcgtgcca agacaagtgc
     3061 cggaaagcgc accggatcag gcggctcgaa ggtcagcatc gccatctgct tgaagtcgag
     3121 acgcgccgca ccgggcatcc gctccggcca ggctaggcaa ttggcgatcg gcacccgcat
     3181 atcgggtggc ccaagctgag cgatcatgga gccgtcgcgg tactccacga tgccgtgaac
     3241 gatcgattgc ggatgcacca cgatatcgat ctggccggaa ccaaagccaa acagataatg
     3301 ggcctcgatc agttcaaggc ctttgttcat catggtcgca gaatcgatgg tgatcttggc
     3361 acccatcgac cagttgggat gctgaagcgc ttggtgcacg gttgcggcgc gcatttccgc
     3421 gagcgaggcg gtgcggaatg gaccgcccga cgccgtcaat atgattcggc tgacgtcgtc
     3481 gcgtcttccg gctgagagag cctgaaagat cgcgttatgc tcggaatcga ccggcagcac
     3541 aatcgcgccg gtcgtggctg cccgttgcat gaacaaagtg ccagcgcaga cgaggcactc
     3601 cttgttggcc agagcgaccg tggcgccgcg ctcgatcgcc gtcatggtgg ggcgcaaccc
     3661 cgccgctccg gtgatcgccg ccatgaccca atccgccggc cgctgtgcgg cctcgacgac
     3721 cgcttcggca ccggcggcgg cctcgatgcc ggtgccggcc agcgcatcct caagctcgcc
     3781 ataacagtcc ggctcagcga cgaccgcgaa ttttgccctc agctcccggg ccagatgcgc
     3841 gagcgcctca gcgttgcgtt gggccgtgac agcctcaaca cgaaaacggt cgcgttgcga
     3901 gcgcacaagg tcgatcgtgc tagttccgat cgaaccagtg gcgccaagca acgtgatcga
     3961 catctcgcca gcgcgagatg ccgcttcggc atgagcaatc ggaacgatcg acatcgacat
     4021 caccagcgtt tcaccacaac aacagtccgc gtgccggtgt gtccggcccc ccgcgcatca
     4081 gcccgatcaa tgctgccacg ccggccgcga caatgaaacc gtcaagtcgg tccatcaacc
     4141 cgccatgccc gggaatcatg tggcctgcgt ccttcacccc gaaccggcgc ttgaccgccg
     4201 attcgaacaa gtctcccgcc tgcgagacga tcgaaagcac gagtgcgacg cagaccgctg
     4261 gcagaagtgc cgcattggta ccgacataca ccacggccgc gccgctgacg agcgcgccca
     4321 cggcgccgcc acaggccccc gaccaagtct ttttcgggct gatacgcgga gcaagtttgg
     4381 ccccgccgat tgccctgccg atgaaatagc ccaaaatatc ggtggcccat acgattgcga
     4441 acaggaacag gatggcgacg aggccgaact cccgatcgcg gcgtagtgcc agcggcgcaa
     4501 gcagcacggt accggcatag gcaacgccgg cagcgcccca cgcgcgacgg tgtggggggc
     4561 acattcccgc gaccccggcg acgccagccg cgagcaccat gaatgcagcg tagagttgcc
     4621 cggcgcccgc cgccagcgca gcgaccacaa gcgccgcccc gccggccgcc cgcaccgcgg
     4681 cgccgccgcc ggtgacgatc gcgctccatt cccagaagat tccgagcgcc gccgcggtcc
     4741 agaacagcac gaacggccac ccgcccagca caaccgcgcc ggcggcgagc actgccatca
     4801 cgatgccgga cacgatgcgc ttaccaagct cacctgtcga tttggaactc gtcgggaccg
     4861 cttcgttcac ggcatcacga gccggcgcga gccttgaggc ccccgaatcg gcgctcgcgc
     4921 cgtcggtatt ccgcgatggc gttttccagc gtggtccggt cgaaatctgg ccaataggtc
     4981 ggaacgaaaa cgagctcgct gtaggccaat tgccataaca gaaaattcga caagcgctgc
     5041 tccccgctgg ttcggatcag aaggtccgga tcgggcagat ccggcgcatc aagatgcctt
     5101 cctatcacgt ccgcggtaat gtcgccgggg cacagtgtgc cggcaacgac agacgaggcg
     5161 atgcgttgtg ccgcgcgcgc gatttcttgg cgtccgccat aattgaacgc gaccaccagt
     5221 aggagaccgt ggttgttctt ggtcagctct tcggcctcct ccagcaggcg ttcgatttct
     5281 ggctcaagac cttggcgccc gccgatgatg cggacgcgca cattgttttt atgaagctct
     5341 gcgaggtcgt tgcgaatgaa gcgacgcaac aaccccatca gatcgcggat ttctgtgacc
     5401 ggccgcgacc agttctcgga gctgaacgag tagatggtca gaatctcgat ccccaattca
     5461 ccgactgcgc gcacgacgcg acgcaacgcc tcgacgccac ggcggtgacc ctcgccgcgt
     5521 ggcaggccgc gctcggcggc ccagcgcccg ttgccatcca taatgatggc cacgtggcgc
     5581 ggcggttcga agctggaatc gggcgcggcg gcgtcccgcg ctttcggcga agccgaagct
     5641 tcaggcatcc tttactccaa gtgtcgcggt tcgggactca aaccgtcatg atttcttttt
     5701 ctttgccggc aagggtctga tcgacttcag tgacgacctg atccgtcgcc ttctggacct
     5761 cgccggacat gcgggtgtgg tcgtcctcgc tgatcttgcc gtctttttcg agcttcttta
     5821 gtagatccag cgcatcacga cgtacgtggc ggaccgcgac ccgcgcagct tcggcgtatt
     5881 tgtgggcgac cttcaccatc tccttgcggc gttcctgatt gagttcgggg atacgcagcc
     5941 gcagcacctg cccttcggtg gccgggttca aaccaagatt ggaattgatg atcgccttct
     6001 cgaccgcgtg caccatagac ttgtcccaaa cctgaacgct gaggagccgc ggctccggca
     6061 cgctgatggt agcaagctga ttgaggggca tgtgggtgcc gtaggcatcg acctggacgg
     6121 gatccagcat gccgggggag gcgcggccgg tacgcagccc gccaagctcc tgcttgagca
     6181 cctggaccgc gccctgcatg cggcgcttga cttcattgag gtcgtagttc gcggttgcca
     6241 tctcgcatct ccccggacag ctggccacga ctccttggaa aaagggaggt ggccgtttgg
     6301 tcgtgcttgt cgagcgccag gcgctcctct gataagtgga caagcgaagc gtgcccacct
     6361 tgccacatcc gacgtgggcg cgcttcgctt tgcccaccta acaactgcgc cgtcgacagc
     6421 tattcaacaa tcgtcgcccg gcccgatcca ctcaagacgg cctcgatcgc tccgggctcc
     6481 agtatcgaga atacaatgat aggcgtgcga ttctcgcggg caagagcaaa cgctgtcgcg
     6541 tccatgacct tgagttcccg ccgaaacgcc tcctcgtggg tcaatcggtc gtagcgcttt
     6601 gccgtcgggt cctgtttcgg atcagccgta taaaccccgt ccacattggt ggccttgagg
     6661 acggcgtcgc agcgcatttc tgctgcgcgc aggacggccg tagtgtcggt ggtaaaaaac
     6721 ggattgccgg tgccgcccgc gaataccact acccgattgt cgtcgagatg gcgcatcgcc
     6781 ctggcgcgtt cataggtttc gcatacctgc ggcatcgtca aagcggacat ggtacgtgcc
     6841 ggcgcgccgg cacgttcgat cgcagcttcg agcaccagcg cattcatgac ggtcgccagc
     6901 atgcccatgg cgtctccggt cggccgcgat accccttggg ctgcgacctc gacgccgcgt
     6961 aacacattgc caccgccgac cacgaccccg atggtgatac cgcggcgacg cgccgccgct
     7021 atatcggcag caaaacgatc gacggtgggc tgatgaatac caaacatctc aggcccgctg
     7081 agcgcttcgc ctgagagctt gacgatcacg cggcggtatc ttggcacggc cccctcgacg
     7141 cagtttcgac ttacctgccc gccatggcgg cgacctcgcc gccgaaatcg ctgtcggggc
     7201 ggtcaatgcc ctcgccgagc gcgtagcgca cgaagcccgt caccttgatg gcgccgccga
     7261 ccttgccttc ggcctccttg agggcctggg tgacagtctt ggcgggatcg tgaatatagg
     7321 gctgctccaa caagcagacc tccttgtaga aggtcttaag accggattcg acaattttgg
     7381 caatcaccgg ctccgcctta ccttgggcgc gaaacttatc ggccaaaatg tctttctccc
     7441 gcgccacgac ctgggggtcg aggccgcccg gatcgacggc ctgcggattg gacgccgcga
     7501 tgtgcatggc gatctgccga ccgagcaccg tgagctcatc cttctggccg ggcgattcga
     7561 gcccgacaat cacgccaatc ttgccaagac cttccgacac cgcgttgtgc acataggtac
     7621 cgattgcacc ggtcttgatc gagacctctg cggcccggcg caacgacatg ttctccccga
     7681 tggtggcgat cgccgcattg atggcatcgt cgacggtgag gttgccgacc ttgccggcct
     7741 tgatcgcctc cacatcggca ccgacatcga gcgcgacatt ggcgatcatg cgcacgaggc
     7801 cctggaactg ctcgttgcga gcgacgaaat cggtttccga attgacctcg accacgacgc
     7861 ctttggggcc gcggaccgca acgccgatca agccttccgc ggcgacgcgc ccggccttct
     7921 tggcggcttt ggcaagccct ttcttgcgca gccaatcgac tgctgcctcc atctcgccct
     7981 tggtttcccc aagcgcggcc ttacaatcca tcatgcccgc gccggtctta tcgcggagtt
     8041 ccttgaccat ttgagcgctt acattcgcca tggcggtcat cctgtctgtc agcgtcgttc
     8101 acctgtcccg cttgcgcgga gagggagaag cactactcgg cgccgagttc cttggcctgg
     8161 gcgatccagc cgtcgacacg tcccggcaac ccgacctcct cgccgacatt gtgggcggca
     8221 gtcggaccga gaccggcaat ctgccagtaa tggaagatgc caaggtcgtt gagcttcttc
     8281 tcgatggtcg gcgatacgcc ggaaagtttc ttgaggtcgt cggcaacacc gcgcggcccg
     8341 gacagcgcct cgaagcccag tccgtcggtc ttttccgcct gaaccacttc ggcgatcggt
     8401 tcctcggcgg ccccaatgtc gatgcccaat tcgccctgcg cacgtgaaat cccatcgatc
     8461 gccgccttgg cgatgaggtc gcaataaagc gagatggcgc ggccggcgtc gtcgttaccc
     8521 ggcaccacaa aggtaatgcc gtctggatcg caattggtgt ccacaacggc agcgaccgga
     8581 atattgagcc ggcgcgcttc cttgatggcg atatcttcct tgttggtgtc gatcacaaac
     8641 acgaggtccg gaaggccgcc catgtccttg ataccgccaa gtgcacgatc gagcttgtcg
     8701 cgctcgcggg tcagcgtcag gcgctccttc tttgtatagc cgtgcgcctc gccggcgctg
     8761 agaagctctt cgagcctgcg cagccgcttg atcgattccg agatggtctt ccagttggtg
     8821 agcgtgccgc cgagccagcg tgaattgacg taatactgcg ccgacttctt ggcggcctgc
     8881 gagaccgcgt cctgggcctg ccgcttggtg ccgacgaaca ggatgcgccc acccttggcc
     8941 acggtgtcgc tcactgccga gagcgcgcga tgcagcatcg gcacggtctg ggcgagatcg
     9001 ataatgtgga tgttgttgcg ggcgccgaag atgaaatcct tcatcttcgg gttccagcga
     9061 tgcgattgat gaccaaaatg aacgccagcc tcaagcagct ggcgcatcga atactcagga
     9121 agcgccatcg attttctccg gttgttccgc cgcggacccg tgagcgtatg cggctacctt
     9181 gcggtcgccg gtcggccacc ggacggcttt ctgggccaag atccgcgtgt gagatggcgg
     9241 ctatatagcg ggggcgatag ggagatgcaa ggcaaggcgg ctggcggccc gcgccgcttg
     9301 cttggcgccc gctacccgcc aaatggccga tctgcccccc tctggctggc gcgaaacgag
     9361 cacaatcttt ccgcgatccc gactttgggt cggcgtatct gtcattcacc gacaacgtca
     9421 aagctctgcg gcatttcccc tcgccggtag atttcaaaca tctgatcgta ggcgcgttcg
     9481 atattgcgac ggaaccggtc ggtgtcgaaa agcgcccagg tgctccggtt ggtaacgagc
     9541 ttggcccgga gagcctgcat ccgcgaaggg tttcgcgcca aatcgagcgc cagggcttcg
     9601 tatccctcag gcgtttccgt taccagttcg cccagtccga tcgcgcgcag catgctcgcg
     9661 gcgacgcggc ccacgaacgt cggccccatc agcgtcagca cgggcaggcc tgcgaagagg
     9721 gcgtcagacg ccgtcgtgtg cgcattgtat ggatgtgtgt cgagaaacaa attcgcaagc
     9781 cgatggcgcg cgaaatggtc gacccgtgcc ggcagggctg gcgcaaatac gagccgctgc
     9841 gggtcaactc cctgagcagc agcatgattg cgcagtttct cctgaccttg accccgatta
     9901 tctgacaacc acagtatgct gccctcgacc gaacgcagca atcgcatcca caggtcgaac
     9961 atcgattgcg tgatcttgta gttcttgttg aagcaacaaa atacgaatcc atgatccgga
    10021 agcccacatt cgcgccgact tggcgtcgct tgcgaaatcg tttgcgtcga atcgccgacc
    10081 ataaagctgt caggcagata aacgagtctc tcggtgaaaa acccctgctc ctccggcggc
    10141 gccacaatcc ggtcgaccag caaatagtcg acgaagttcg cgcccgaagt cccacaatac
    10201 ccaaggtagc ttgcttgaac cgacccgacg cggcgcgcca gaatacctgg tcggctgtgt
    10261 tcggtatatc cggcaagatc aatgacgaca tcgatctcga gctgccgcgt cagcctcaca
    10321 atatcctcgt cggaacgggc gtgcatatcg tggaagccgt caaaggctct gacgatgcgc
    10381 ccgcggacat cgctgtcgtc cggcggcccc aatgaaacgc cgatcacctc gaaccgcgta
    10441 cgatcgtgcc gttccaacag ttcggggatg aggtatgcaa ggggatgaat ccggaagtcc
    10501 ggcgaaacat atgcaattcg aaggcgtgcg gggcgcccca cggcaggtac tcgtgtcaac
    10561 cgtgcggcgg cgatccgcgg cgcggcgttc ctcgctgcct tgagatgctc cgccgggtcg
    10621 ctgctaatcc gcagcaccaa tagcggatcc actcgctgac cggcgttcac tgctgcgagc
    10681 accctttgcc gggcttgcgc tacttgcgcc cagtcgcagc tttcctgagc acaggtcatc
    10741 aatccaaccc acccggccag cgcgtgactc gggaacaagg ctaggttttg gaagtcccgc
    10801 gctgccgctc ccagcaatcc taagctctgc aggaggttcg ctcgcttgtg tagattggcc
    10861 ggattttgcc cgattggtat tcgctcgaag gttgccaccg attcgtcgat gcggcctagt
    10921 cgggccagta cggcaccttg tccaatcagc gcctccatat ttcggtcgtc gatcttgagc
    10981 gcctgattgt agctcgcgcg tgcttcatcc agccggttcg agcggaacag cgcattaccg
    11041 cgggtgacca gtgtctcgac atgattcggc gcaagaacga gaacacgatc gcaggtcgcc
    11101 agtgtttcga ttggcagacc gagaatcaac agcacaaacg caaggttcga tagcgcctca
    11161 acggattgcg gcctaatcgc gacagcttgt tcgagaaact ggcgcgcctc ggccggcgtc
    11221 cgctgctgca atctaatcag acccagaatc atcagtgctt caaaatgccg tgggtcacgc
    11281 gcgagtatgg aatggcactt ggactccgcc tcccctaacc gcccctggcg atggagatcg
    11341 atcgcatctt tgatgtttgc cattaggaat ttccaacatg atatcgacaa cgccgcagtc
    11401 gttttggatg ttgggggctt gtttacattc atcgcgtcga aaggacgatg gccacgaggt
    11461 cgatcatcgc ggcgaggcat gcgtcggttt tttggtagcg cgtcgcaata cgtcgaaaca
    11521 tcttgatgtc gcggaagaag atttcgatgg caccacgcac caggactcgt cagagtgaac
    11581 cccggatatc tgccctcgac gcaacagttt gacccgcgcg cgccaggcgg acatcgccac
    11641 cgggcgaccc gccgcgcggc taccaccact tctgcggtat aaaccgccct gccgccgcct
    11701 cgatcaccgc cccaagcgag aacagcgtct cctcgtcgaa cggccgaccg atcagttgca
    11761 ggccgagggg caagccttgc gcatccaagc cgcccggcac cgagatgccc ggcaggcccg
    11821 ccatgttgac tgtgacggtg aacacgtcgt tgagatacat ctcgatcggg tccgcgctct
    11881 tctcgccgat cgcgaaggcg gccgacggcg tggtcggtgt caggatggca ttggcgccgg
    11941 cacggaaaca gtcctcgaag tcgcgcttga tcagcgtgcg gactttttgg gcgcgcaggt
    12001 agtaggcgtc gtaatagccg gcggagagca cataggtgcc gatcatgatg cgccggcgca
    12061 cctccttgcc gaagcccgcg gcgcgggtct gctcatacat gtcgatgatg tcgcggcccc
    12121 ctgcgcgcag gccgtagcga acgccgtcgt agcgcgcgag gttcgacgaa gcctccgcag
    12181 gcgccacgat gtaataggcc gcaagcgcgt atttggtgtg cggcagcgac acctcgacga
    12241 tttcggcgcc ggccgctttg agccaatcgg cgccgcggcg ccacagtgct tcgattgagt
    12301 ccgacattcc tttgacgcgg tattccttcg gaatgccgat cttcatgccc ttgacggaac
    12361 gcgtcagcgc cgcctcgtag tcgggcaccg ccacatcgac cgaagtggtg tccttaggat
    12421 cgtaccctgc cattgagcga agcagaatgg cggcatcgcg cgccgtgcgg gcgaacgggc
    12481 cagcttgatc gagcgaggac gcatacgcca cgatgcccca gcgcgaacag cggccatagg
    12541 tgggcttgat gccgacgatg ccggtgaaag ccgccggctg ccggattgag ccgccagtat
    12601 cggtgccaac cgcgccgagg caggtatttg cagccaccgc cgccgccgag ccacctgacg
    12661 acccgcccgg aacgagccgc atgtccgaac cgttgcgccg ccatggcgac acgaccgggc
    12721 caaaacacga ggtctcgttc gacgagccca tagcgaactc gtcgttgttg agcttgccca
    12781 gcatcacggc gccgtcgcgc cacaggttgg cggtgacggt cgattcgtag gtcggtacga
    12841 aggtatcgag gatgtgtgag catgccgtgg tgcgcacgcc cttggtcgcg aacatgtcct
    12901 tgaccccgag tggcacgccg gcgagcggcc ccccctcccc tttggcgaga gccgtgtcgg
    12961 cgcgcgcagc catctcgtgc gcccgttccg gggtttccag cgcgaaggcg ttgagcgcgc
    13021 gcgcttcttt tgcggccgcc acatgcgcct cagtcaactc gacggcggag aactcccgct
    13081 tgcgcagcaa atcacgtgcc tgcgcaacgg tcagcgcggt gagttggctc attgcgagcg
    13141 cgtctcctcg caggtgaagg gcgactttat ttctcccctt gggggagaga tcgtactcac
    13201 cctcaggggc gccgggttat gctgcgccgg agccgcgtcg actccctccc cccttgtgga
    13261 gaggggtcgg ggggcgggac gttctagcaa ataagcaccc cgcggctcga cccccacccc
    13321 cgccccacaa gcgggagggg aggcgttcgc ggcgtccgaa agagtgggcg ggacgcccga
    13381 gctcccaggc gtagcgcgtg ccgccgcttc catctcggca aaccataatg cgtccatttc
    13441 acaggcgagg cacatcagac gaccctttcc tgcgccggcc gggccgacgg ctcgtcgcag
    13501 gtgaataggc gtacctcgcg caccacgacc ggcaccggtt cgactggacg aatgtcgatc
    13561 gcccacggcc ttgtcgcggc cttctgggcg gggcgccaaa acttgccgcc tgccttgttg
    13621 aaataggcca cgtattgggc ggggaattct tcacattcgt cgcacatcgc cacgccctat
    13681 cccaattact gcccgttgga cctattcgac caccttgggc accagaaaga aatggtcttg
    13741 ggtggcgggc gcattcttca cgatatcatc cgcgatctcg ccgtcggtca ccacgtccgg
    13801 acgtttcttc atgaccatgg ggatcaccga ggtcatcggt tcgacgcccg caacgtcgac
    13861 ctccgacaac tgctccacga aggcgagcat atcgttgagc tcacccttga ggtgctcgac
    13921 ctcatcttcc ttgaccgcaa tgcgcgccag atgggcaatg cgccggacgg tcgcggtatc
    13981 gacggacatg ttttctgtgt tcccggcgcc tgattggttt ttcgaatgcg tttttgcgcg
    14041 aaatcgaaga cacggtctac tgcctatagc agaggcccat ttggcatcgc aaccgaggaa
    14101 aacctgccag tgccaaggaa cccggagtgc tttggtgggt tgttatgatg gcctgctgac
    14161 cgggccgact atcgagccca ttgttgcttc ccttttgtgc tcgtcgctcg tttcacttca
    14221 gccgaggctc tcatgtcgct tctgatcagt gtcctcatca cgttcgtcgt tgtcgtcttg
    14281 gttctctact tggtgaacct cctgccggtc gatcgccgcg ccagacagat cgtgcgtgtg
    14341 attgtgatca tcatcggcgt tttgtcgctg ctgcggcacc tccaggtcta ttgattgatc
    14401 gcaaaagtgc cggcaggcgg atgagcttgc acgcccggcg gtatagaggg ggcggaccgg
    14461 aaccgtaatg ccccgcaatt cgcgcctgga ccgcttgcgc acccccgccc acctgctggg
    14521 ctatgagatc atccgagagc gagccttggc acacgggcgt tttgggccgc gcacttgaag
    14581 cggcgctcac gaggctgcgg gaatttgatg ccatgcattc gttagcgagc gcgaggccag
    14641 ccgatcggca ggcccgtcga acgttggtgg ctgaggctcg gaacgcgctg tggatgttcg
    14701 tggtccaacg cgaagcctgc ggcctgctcg ataaccgcac cttgatgcgc gactatcagg
    14761 tgccccggac gtccagaagc agatgggcgc gttcccgtag acggggtaac gggcctcgac
    14821 ttggccaatc ggataattaa cgattggttg tcgtccctca aaatgatggt gtcagcaacc
    14881 ggattcacgc gttgcctgct cgaaccacca tcgcaagtgg aaacagggat tgacaaacca
    14941 aggccgttac agaagccccg atggagaagc gtaatccggg aatgcaataa gcaaggccgt
    15001 cccccaacat tacgcgccgg caagccggcg cccttgcgag ctatgtgcgc gacacgcctg
    15061 cgcctcgacc accgcgaccg cagtcatatt gacgatgccg cgcgcggtga ccgacggcgt
    15121 gagcacatgg gccggccgcg ccgcaccaat caggatcggg cccactggca gagcatcggc
    15181 cagcaccctg atcgcctcat aggcgatatt ggcggcatcg aggttcggga agatcagcac
    15241 gttggcttgg ccattgagcc gggaatgcgg ataggtacgc tgacgttgcg caggatcgag
    15301 cgcggtatcg gcgtgcatct cgccgtcgac ctcgaaatcg accttcatgt ccctcaacat
    15361 cgcagtggcg cgccgcatct tgcgcgagga tggcgaatcg gaggtgccga aattcgagtg
    15421 agataccagc gcgattttcg gctccaggcc gaaccgacgc acatgggcgg ccgccagtac
    15481 cgccatttcg acgacctctt cggcggacgg gtcgcaccgt acctgcgtat cggacacgaa
    15541 gaaatggccc ttgccggtaa tgatgagcga cagtgccgcg aactcgccga cgccaggggc
    15601 gcagccgatg acatcgcgca catgccgcag atggctcatg tagccgccct cgaccccgca
    15661 gatggcggca tcggcgtcgc ctgcccgcac catgcaggcg gcgatgacgg tcgcattggt
    15721 gcgcatcaag gtacgcgcgg cgtcgggggt tacgccgcgg cggccggccg cctcgacata
    15781 gagatcgaca tactggcgat aacgcggatc gtcttgtgga ttggtgagcg cgaaatcgcg
    15841 ttccggccgg attgcaaggc caaaccgctt gagccgtgtc tcgatgacgg cgggacggcc
    15901 gatcaggatg ggctttgcga gcccctcctc caccaccacc tgggtggcgc gcagcacgcg
    15961 ctcgtcctcg ccctcggcgt agacgacccg tttgggatcg gtcttggcct tcgtgaacag
    16021 cggcttcatg ataaagcctg agcggaacac gaaggcgttg aggcgctcgc gataacgcgc
    16081 gatgtcggcg atcggacgcg tcgcgacacc cgatttcatc gccgcctccg caagcgctgg
    16141 cgcaatgcgc aggatgagcc gcggatcgaa cggattggga ataagcgacc ccaccccgaa
    16201 ggtcggcgcc tcgcccccat aagcgcgcgc cgcgacctct gagggcgtct cccgcgccag
    16261 cgccgcaatg gcctcgacgg ccgcaatctt catcgcctcg ttgatcgagg tcgcacagac
    16321 gtcgagcgcg ccgcgaaaga tataagggaa gcacaggacg ttgttgacct ggttcggaaa
    16381 atccgagcgg ccggtgcata tcagtgcgtc ggggcgcgcc tttagcgctt cgtccggcat
    16441 gatttccggc gtcggattgg cgagcgccat gatgagcggg cgcgacgcca tgcgggctgc
    16501 catctccggc ttgagcacgc cgggcgccga cagcccgatg aaaatgtcgg caccttcgat
    16561 gacgtcggca agttggcgct tgtcggtatt ttgcgcatag acgcgcttcc aacgatccat
    16621 cagggccgcc cggccctcat agaccacgcc ttcgatatcg gtgacccaaa tattttcgtg
    16681 ccgcgcgccg agcgagacca ggaggttgag gcaggcgagc gcggcggcgc cagcgccgga
    16741 ggtgacgatc ttgaccttgt cgatggtctt gccggtgaga aacagcgcgt tctttacggc
    16801 agccgccacg atgatggcgg tgccatgttg atcatcgtgg aacaccggaa tcttcatgcg
    16861 ctcctggagc cgcgcttcga cctcgaagca ttccggggcc ttgatgtcct ccaggttgat
    16921 gccgccgaag gtcggctcca gcgccgccac cacatcgacg atgcgatcga cgtccttggc
    16981 gtcgatctcg atatcgaaca cgtcgatgtc ggcgaatttc ttgaacagaa cggccttgcc
    17041 ctccatcacg ggcttggcgg ccagcggccc aatgtcgccg agccccagca cggccgtgcc
    17101 gttggtgacc acggccacta gattcgcccg ggccgtcagc gcggcggcct ccgccggatc
    17161 cgccgcgatc gcctcgcagg cgacggcgac gcctggcgtg taggccagcg ccaggtcgtg
    17221 ctgcgtcgcg agcggcttgg tcgcctggat cgtcagtttc ccgggtctcg gcatccggtg
    17281 ataggccagc gcactggcct tcagatcgtc cgacactttg gtggccacgc cgaatctcct
    17341 cccgctggcg cgcggcacct tagaggaccg tcgtgggttc ggcaaagcga agaagcggcc
    17401 ctgcgtctct cgccaaggga aatcgaacaa ttatttacgg tgttggcggc agtggaatat
    17461 tgacgccgcc gacgccagcg ggatttgttt tcgcttcacc tagtatcttt tccaatgact
    17521 cccgcgacaa cattccgaga aagatcgcat atcccatcat aatcgcgaga tcaaatacgc
    17581 cggtcccctc tatatgaata cctggaaatg cgcttttcgc ataaagtccc atggtgatga
    17641 accccactgg aacggccgcc acgagctgac gcttgatgga taagccgcga tcggccggca
    17701 aaatgtatga tcgcgaccac acgccgaaaa aataaagcat catcaataac agtaggccaa
    17761 gtacattggt aatcagtatg ggaagaatag taggctcggg taatacttga ctcatgaagg
    17821 cctcctctat cccggcaacg ctggagcgat ttcggtgaaa tggaacctgt attgcgttcg
    17881 ccaattctcg gcgtcattcc cgcgaaagcg ggaat
//
LOCUS       DATILV010000967         3871 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4331098, whole genome shotgun sequence.
ACCESSION   DATILV010000967 DATILV010000000
VERSION     DATILV010000967.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3871)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3871)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3871
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4331098"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..375)
                     /locus_tag="VLJ17_23325"
     CDS             complement(<1..375)
                     /locus_tag="VLJ17_23325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix DNA-binding protein"
                     /protein_id="HSV25945.1"
                     /translation="MKAVMKAAEPAERDQRFEQVRPLYLESLTLVERLHRRLLDVIKD
                     EFDRRGRADINSVQALLLYNVGDKELTAGELRTRGYYLGSNVSYNLKKLVEMGFLDHQ
                     RSRVDRRSVRIRLTPQGQEVRRI"
     gene            complement(598..1485)
                     /gene="mmsB"
                     /locus_tag="VLJ17_23330"
     CDS             complement(598..1485)
                     /gene="mmsB"
                     /locus_tag="VLJ17_23330"
                     /EC_number="1.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019962545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008442 - 3-hydroxyisobutyrate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006574 - valine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyisobutyrate dehydrogenase"
                     /protein_id="HSV25946.1"
                     /translation="MARIGFIGLGNMGLPMAGNLIRAGHTAVGFDVIKPLTGKLSAIG
                     GLAAESIATACAGADAIITMLPASEHVRDVYCAAGGVIGAAGAGALLIDSSTIDVATA
                     REVAARAAEQGLAMVDAPVSGGVAGAQAGTLTFMVGGPDAAFARARPILEAMGKTIVH
                     AGGSGNGQAAKICNNMILGVSMIAVSEAFLLAEKLGLDAKRLFDIVSKSSGQCWSMTS
                     YCPVPGPVPTSPANRDYQAGFTAGMMLKDLKLAQDAARAAQAVTPLGAAAAELYGLFA
                     NHGHAGEDFSGIVRFLRGG"
     gene            complement(1511..1957)
                     /locus_tag="VLJ17_23335"
     CDS             complement(1511..1957)
                     /locus_tag="VLJ17_23335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6163 family protein"
                     /protein_id="HSV25947.1"
                     /translation="MIDPHSHDLIEREAPARGLIFKLRNSGWTDRLVLFLRVMAVTSM
                     LKGLYHWAAVCGIIGEEGGFEAHPQSWQATTVFFSVIDLVAAVGLWLVAPWGAVVWLT
                     STVTMLMVQLFFEQVYGTDMTIIAAGGLAILAYLILSVLAAREHPR"
     gene            complement(1954..3123)
                     /locus_tag="VLJ17_23340"
     CDS             complement(1954..3123)
                     /locus_tag="VLJ17_23340"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HSV25948.1"
                     /translation="MSSEMSSEMSSEPEILLDRCGTAGIVTVNRPAALNAVTRAMVLT
                     LHEALERWRHDGAVSRVIVTAAGGRAFSAGGDLRAIYEAGRAGRQDESIAFWREEYAL
                     NAAIKHYPKPYVALINGIVMGGGVGISLHGSHRVAGERFQFAMPEVGIGFFPDVGATW
                     FLPRLPGEIGTYCALTGERLQLADALAVGIATCHVASARFAELTEALCGAASVDAILA
                     AFAEPVSSPLVGAGGRGADVPHPSTSTPDPSPQGGGEKSPFAHRSAIDRIFAADSVED
                     ILALLDAQATTANSEARWAAEVAAMIRTKAPLSLKIALAQMRRGRNWSFAQCMQAEFR
                     IVSRVAYGHDFYEGIRAVIIDKDNRPHWHPATLAEVTPECVECHFAPLQAELALP"
     gene            3501..>3871
                     /locus_tag="VLJ17_23345"
     CDS             3501..>3871
                     /locus_tag="VLJ17_23345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoglutarate-dependent dioxygenase AlkB"
                     /protein_id="HSV25949.1"
                     /translation="MHDLFDQHAREDEKINLGTDAVVLRGFTCEIELELLAALRGVIA
                     LAPFRNMITPGGHTMSVAMTNCGTFGWVTDLSGYRYARQDPVSGNPWPRMPPVFLSLA
                     SRAAATTDFEGFLPDACLINR"
BASE COUNT          790 a         1256 c         1142 g          683 t
ORIGIN      
        1 gatgcggcgg acctcctggc cctgcggggt caggcggatg cgcaccgagc ggcgatccac
       61 gcgcgaacgt tgatgatcca aaaagcccat ttcgacgagc tttttcaggt tatacgacac
      121 gttggaaccg agatagtagc cccgcgtccg cagctcgccg gcggtcagtt ccttgtcgcc
      181 gacattgtag agtagcagcg cctgaaccga attgatgtcg gcgcggccgc ggcgatcgaa
      241 ttcatccttg atgacatcga gcagccgccg atggagacgt tcgaccaacg tcaacgactc
      301 cagataaagc gggcgaactt gctcgaaacg ctggtcgcgt tcggcgggct cagccgcctt
      361 catgactgcc ttcatgtttg cgcctttcgc aattttttta tcgaacggcg ggccctgttt
      421 tccgccgttt catcgataaa ctttacgcac aacgatataa aatcggctta aacaacacga
      481 tgaagacggc gtttattggc cccggaaaat gcttgctact gggttaacgg ccgtgactga
      541 tttcacgcta tgcctgcttc gccgcgagcg gccaaaaacc gctgcgccac agccacttca
      601 cccaccgcgc aaaaatcgga cgatgccaga gaaatcttcg ccggcatgac cgtgattggc
      661 gaacaaaccg taaagttccg ccgccgccgc gccgagcggc gtcaccgctt gcgcggcacg
      721 ggcggcgtcc tgggcgagct tcaagtcttt gagcatcatg cccgcggtga accccgcctg
      781 atagtcgcga ttggccggcg acgtcggtac cgggcccggc accgggcaat agctcgtcat
      841 cgaccagcac tgtcccgatg attttgagac aatatcgaac aagcgcttgg catcgaggcc
      901 aagcttttcg gcaagcagga aagcttccga caccgcgatc atcgataccc cgagaatcat
      961 gttgttgcag atcttcgcgg cctgcccgtt gcccgaaccg ccggcgtgta cgatggtctt
     1021 tcccatcgct tcaaggatcg ggcgtgcacg tgcaaaagca gcgtccggtc cgccgaccat
     1081 gaacgtgagt gtgccggcct gggcacccgc aaccccaccc gaaaccggcg catccaccat
     1141 cgcaagtccc tgctcggcgg cgcgcgctgc gacctcgcgg gcggtcgcta catcaatggt
     1201 cgaggagtcg ataagcagcg cgccggcacc ggccgcaccg atcaccccgc cggcggcaca
     1261 atagacgtcg cggacatgct cgctcgccgg cagcatagta ataatggcgt ctgcgccggc
     1321 gcatgccgtg gcgatcgact ctgcggcaag tccgccaatc gccgagagct tgccggtgag
     1381 cggcttgatc acgtcgaatc ccaccgccgt atgtcccgcc ctgataagat tgcccgccat
     1441 cggcaaaccc atgtttccga gcccgatgaa accgatgcgc gccatgtcag cctcctcatt
     1501 ccaattcacg tcagcgtgga tgttcacgtg cagccagcac ggacagtatg agataggcca
     1561 gaatcgcgag cccgcccgcc gcgatgatag tcatatcggt gccatagacc tgttcgaaga
     1621 acagctggac catgagcatc gtcaccgtcg aggtgagcca caccacggcg ccccatggcg
     1681 ccaccagcca cagcccaacc gcagcgacga gatcaatcac ggagaagaac accgtggtgg
     1741 cctgccacga ttggggatgg gcttcgaacc cgccctcttc cccgatgatg ccgcatacgg
     1801 ccgcccaatg ataaaggccc ttgagcatcg atgtgacggc catgacacgg aggaacaaca
     1861 ccaaccgatc ggtccatccg ctgttgcgca acttaaagat caagccgcgc gcaggcgcct
     1921 ctctctcgat gaggtcgtgg gagtgcggat cgatcatggc agcgcaagct cggcttggag
     1981 cggggcgaag tggcactcga cgcattccgg cgtcacctcg gccaacgtcg ccgggtgcca
     2041 gtgaggacga ttgtccttgt cgatgatcac ggcacggata ccctcataga aatcgtgtcc
     2101 ataggcgacg cgagacacaa tgcgaaattc cgcctgcatg cattgcgcaa acgaccagtt
     2161 gcgaccgcgc cgcatttgcg caagcgcgat cttgagacta agcggcgctt tggtgcgaat
     2221 catcgccgca acttcggccg cccaacgcgc ctcgctgttt gccgtcgtgg cttgcgcgtc
     2281 gagcagcgcc aatatgtcct cgacgctgtc ggcagcaaaa atccggtcga ttgcgctgcg
     2341 gtgcgcgaat ggactcttct ctcctccccc ctgtggggag gggtcagggg tagaggtcga
     2401 tgggtgaggc acatccgcgc cacgacctcc cgcccccaca aggggggagg aaaccggctc
     2461 cgcaaaggcc gccaggatgg catcaaccga agccgctcca catagcgcct cggtgagctc
     2521 ggcaaagcgc gcagaagcaa cgtggcaggt cgcaatcccg accgccagcg cgtctgccaa
     2581 ctggagtcgt tcccccgtaa gtgcgcagta ggtcccgatc tctcccggca ggcgcggcag
     2641 gaaccaggtt gcccccacat cagggaaaaa cccgatgccg acctccggca tggcgaattg
     2701 aaagcgctcg cccgccaccc gatgcgagcc gtgcaacgaa atgccgacgc cgccacccat
     2761 gacaatgcca ttgatcagtg ccacataggg cttgggatag tgcttgatgg ctgcgttgag
     2821 ggcgtattcc tcgcgccaga acgcgatcga ctcgtcctgc cggccggcgc gccccgcttc
     2881 gtagatcgcc cgcagatcac caccggccga aaacgcacgg ccgccggccg ccgtgacgat
     2941 gacccggctg accgcgccgt catggcgcca gcgctcgagc gcctcgtgca atgtcagtac
     3001 catggcgcgc gtcaccgcat tgagcgcagc cggtcggttc acagtgacaa tgccggcggt
     3061 accgcagcgg tccaacagga tttccggttc gctcgacatt tcgctcgaca tttcgctcga
     3121 catgggggcc gacggctcat tggatcgttt tcggtgtgca gacgacgtag cccgcatcgt
     3181 ccacgaaatc cagcgagagg atccatcggc gtcccggagc tgcggattcg ggaacgcgag
     3241 caatcaaacg atcagccgca gccctcctcg aaacccgtct ccccgggccc tgttgccaac
     3301 ggcaaaaggc gctaccatta cggtgatgac aaaagcgtgc gcaatccgtc atcgacgccc
     3361 cgatggcggc ttcgatgcaa attcgggccg cagctgtgtg ggggggcggc ccagccgccg
     3421 cttcagtttt ggcgccgctt ttagcccgga tggaaggtag acgatggaaa acctgaaagc
     3481 cgactggaaa tagggtggcc atgcacgacc tgttcgacca acacgctcgc gaagacgaga
     3541 aaataaatct cggcaccgat gccgtcgtgc tgcgcggctt cacatgcgag atcgagctcg
     3601 aattgctggc agcacttcgc ggcgtaatcg cgcttgcacc attccgcaac atgatcacgc
     3661 ccggcggaca tacgatgtcg gttgcgatga cgaattgcgg gactttcggc tgggtcaccg
     3721 atttgagtgg ctatcggtac gcgaggcagg accccgtgag tggcaacccc tggccgcgga
     3781 tgcccccggt atttctgagc ctcgcaagcc gggctgccgc gaccacagac ttcgaaggct
     3841 tcctgcccga cgcgtgtctc ataaatcgtt a
//
LOCUS       DATILV010000968         3347 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_749672, whole genome shotgun sequence.
ACCESSION   DATILV010000968 DATILV010000000
VERSION     DATILV010000968.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3347)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3347)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3347
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_749672"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(141..328)
                     /locus_tag="VLJ17_23350"
                     /pseudo
     CDS             complement(141..328)
                     /locus_tag="VLJ17_23350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558173.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            1017..1982
                     /locus_tag="VLJ17_23355"
     CDS             1017..1982
                     /locus_tag="VLJ17_23355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25950.1"
                     /translation="MPTMITGPYPIATAADRLAPSITRDITLNSTTLNASTNASNSFD
                     LTVLESKDFYAALLSPVDLPTLNFFVRQGYPHELLYWLFADAVRETVGGQTTEYRNVP
                     TETCEESIERPRCFNKLVDLAVANGLTVETKSIESISNGKTISEVYGRFCFDPVLASR
                     VSKDYLDGEYPRSLRASKSYEPRCTNPWKLPPKTAAKTSGVNDTLTFQVNEPKYGLIQ
                     YQIITRSTFGIYQFLGQIINEEAIEKIRLHHRINVEDTRLLTVRREIDGEPCFVDLKY
                     EGGYYCVPAEGGEHTKRIFSILAQLLALKTQTGDLAITPSVRITP"
     gene            2148..3242
                     /locus_tag="VLJ17_23360"
     CDS             2148..3242
                     /locus_tag="VLJ17_23360"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HSV25951.1"
                     /translation="MLCLDGGGVRGVITVAFLRRIEQVLSERYGSNLRLGDWFDLVGG
                     TSTGAVIAGALALGYRTDDLEKFYLQLAPRVFRRPSWRIMYWHAKFDSAALLREIVTV
                     AGSRTLDSSDLITGLCVVAKRMDTGSPWIVANNPKGPYWNTPENRAFIGNRHYRLANL
                     IRASTAAPFFFDPELLPIVESERDGLFLDGAITPHNNPSLAMFLMSTLKGYGICWPTG
                     PDRLLVCSVGTGEFRNLLSAAEARRIRAVGLAVRSLGTLIGDSASLVLTLMQWLGESP
                     TAWFINEEISTLEHDIPLGGPMFRFLRYNAVLEREWIRENLDLKVSQSEVERVRLIDE
                     PAMIPLAYEIGKRAAEQQVKIEHFARKENA"
BASE COUNT          747 a          926 c          911 g          763 t
ORIGIN      
        1 ttggcttgat cggatcgttt gatgatttca actttgagac agggtaggat tttggcaggc
       61 ccgttcgcaa ataacggccg ccttctcgcg acatgcgaga tagagcatat ttggatgcga
      121 tccagaaccc catcgcagca ccgccatacg aagtagtgat ggactgtgct gtacggcgga
      181 aagtccttcg gaaggtagcg ccactggcaa ccggtgctca ggatatatat cactgcgttc
      241 atgatcgcac gcatgtcggc ccgccgcttg ccaccgccgc gcttgggtgt ggtgcaacat
      301 aggcccactc gtcatctgtg aggtcgctcg ggcgttagat gatcacgatt gcatttcggc
      361 cgcttctcaa gcggccacct cggtgaccac tccccgaatc aggtcacctc ctgccagcgg
      421 ttgattttgc cgttccagcc tgacgcttga caggttggac tatctttgaa ttctgatcgt
      481 tgggattttc cgttgcgctg gtcggataat agaagcattg aaaaatgacc cggcagatta
      541 gttcgcgctg cgataaggac aacagttgca atattacctc cgcggcgccg atttagcgac
      601 ccaccttgca tgcactgtta cttacatcaa gtcaaaaatg gtcttgcgtt ggggcgtatc
      661 cgggtatgtg attgtgaccg cggatccgcc cgattactcc ttaaaccgac aatgccatcg
      721 gcgcatcttg acttatgctt tctgtttgat acatggatac ttaggctgag gggcatgtat
      781 tgtcgatttg caactgcttt cgcataattc tcgtcgtctg cagcatcgca gtatcgacgc
      841 aatgtgcgat ggtggataca atcgacgggc gttacgcgca gatcaatcga agctcggaga
      901 aggctcgaaa cgagtcaatt cttctgaaca tcgttagggc gagccgtcat ggtccgctta
      961 atttcgttgc aatttccagg gtgagtgggt ctacatcggc cagcgtcggc gggggcttgc
     1021 cgacgatgat cacagggccc tatccgatag caaccgctgc agacaggctc gctccatcaa
     1081 tcacgcggga tattacgctt aacagtacga cgcttaacgc atcgaccaac gcgtcgaact
     1141 cctttgacct gaccgtgctt gagtcgaaag atttttatgc ggcactcctg agtcccgtgg
     1201 atcttccgac gctcaatttt ttcgttaggc aaggataccc gcatgagctg ttgtattggc
     1261 tgtttgcaga cgcggtgcgc gaaacagttg gcggacaaac cactgaatac cgcaacgtgc
     1321 cgacggagac ctgcgaagaa tcaatcgagc ggccgcgatg tttcaataaa ctagtcgatc
     1381 tcgcggttgc caacgggctg actgtggaga caaaatccat cgaatcgatt tccaacggca
     1441 agacgatatc cgaagtgtac ggacgattct gcttcgatcc ggtgttggcg agtcgagtga
     1501 gcaaggatta tctcgacggg gaatatccgc gcagcctaag ggcctcaaaa tcctatgagc
     1561 cccgctgcac aaatccgtgg aaattgccgc cgaagacagc cgcaaagacg agcggagtta
     1621 atgacactct gactttccag gtcaatgaac caaaatacgg cctcattcaa tatcaaatca
     1681 ttacccgatc gacattcggt atctatcaat tcctagggca gatcatcaat gaagaggcca
     1741 tcgaaaagat tcggcttcac catcgcatca acgtagagga tacgcgcctt ctcacggtcc
     1801 gtcgggaaat tgacggagag ccttgttttg tcgatcttaa gtacgaaggc ggttattatt
     1861 gcgtcccggc tgagggtggc gagcatacca agcgtatatt cagtattctc gcgcaactgc
     1921 tcgccctcaa aacccaaacc ggtgacctcg caatcacgcc gtccgtgcgg ataacaccat
     1981 agccacttca aattgtcgca gaccaccgtc gtcaacattc ggtgcccaag ggattatgta
     2041 tgggtgcatc gagcacagaa ccaaattcgg ataacccagc gagcccacaa ccctccctgg
     2101 gcttcgtttc ccgtgatcat cactattttg ggcccggccc gaagcatatg ttgtgcctcg
     2161 acggcggcgg tgtgcgcggc gttatcacgg tcgccttcct aagacgcatt gaacaggttc
     2221 tgtcagaacg gtatggcagc aacttacgtc tcggcgattg gttcgatctg gtcggcggaa
     2281 cctcgactgg tgccgttatc gccggggcgc tcgcactggg ctaccgtacc gacgatttag
     2341 agaaattcta cttgcagctc gcgccccgtg tgttccggcg gccgtcctgg cgcataatgt
     2401 attggcacgc aaaattcgac tccgccgcgc tcctacggga aatcgtcacc gtcgccggca
     2461 gccgcacgct cgatagcagc gatctgatca ctggcctttg cgtggtcgcc aagcgcatgg
     2521 atacggggag cccctggatc gtcgcgaaca acccgaaagg cccgtattgg aatacgccgg
     2581 agaaccgcgc attcatcggc aaccggcact accgtctcgc caacctaatt cgggcgagca
     2641 cagcggcgcc gttctttttt gaccccgaat tacttccaat tgtcgagagt gaaagggatg
     2701 gcctgttcct ggacggcgcc ataacgccgc acaacaatcc gtcccttgcc atgttcctca
     2761 tgtccacctt gaagggctat gggatatgtt ggccaaccgg ccctgatcgt ctgctggtct
     2821 gctccgtcgg caccggggag tttcgtaatc tcctatcagc agccgaggcg cggcgtattc
     2881 gcgcggtagg actcgcggtt cgctcgctcg ggaccttgat tggcgactca gcgagtctcg
     2941 tcttgaccct gatgcagtgg cttggggaaa gtccaacagc gtggttcatc aatgaggaga
     3001 tcagcacact tgagcacgac attccgctcg ggggaccaat gttccgcttt cttcgttaca
     3061 atgcggtgct tgaacgcgaa tggataaggg aaaaccttga tctcaaggta tcgcagagcg
     3121 aggtcgaacg ggtgcgcttg attgacgaac cggccatgat tcctttagcc tacgaaattg
     3181 gcaagcgcgc cgctgaacaa caggtgaaaa tcgagcattt tgcacgaaag gaaaacgcgt
     3241 gacgcgcctt cgcgataggc tcttcacctt cacgcgcttg ccgccaaacc aaggcgcagc
     3301 gtgcgtccga cgcgatcgag cggtcgcacg aggagttcaa gcgaagg
//
LOCUS       DATILV010000969         1544 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_492640, whole genome shotgun sequence.
ACCESSION   DATILV010000969 DATILV010000000
VERSION     DATILV010000969.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1544)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1544)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1544
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_492640"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..947)
                     /gene="mdh"
                     /locus_tag="VLJ17_23365"
     CDS             complement(<1..947)
                     /gene="mdh"
                     /locus_tag="VLJ17_23365"
                     /EC_number="1.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HSV25952.1"
                     /translation="MARNKIALIGAGQIGGTLAHLIGLKQLGDVVMFDVMEGIPQGKA
                     LDIAESSPVNDFDAKFTGTNTYDSIEGADVCIVTAGVPRKPGMSRDDLLDINLKVMGQ
                     VGSGIKKYAPDSFVICITNPLDAMVWALQKSCGLPQHKVVGMAGVLDSARFRYFLADE
                     FHVSVEDVTAFVLGGHGDTMVPLIRYSAVAGIPVPDLVKMGWTTQARVDEIVKRTANG
                     GAEIVNLLKTGSAFYAPAASAIAMAESYLLDKKRVLPCAAWLNGEYGIKDLYVGVPVV
                     IGAKGVERIVEIELNSGERSMFEKSAAAVQGLVDACKKIA"
     gene            complement(1140..>1544)
                     /gene="zapE"
                     /locus_tag="VLJ17_23370"
     CDS             complement(1140..>1544)
                     /gene="zapE"
                     /locus_tag="VLJ17_23370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008143564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AFG1/ZapE family ATPase"
                     /protein_id="HSV25953.1"
                     /translation="KGHTVRVPKAAMGVARFSLDDLCLQPLAAADYLRIAHEFHTIIL
                     DHIPVMHHAQRNEAKRFIILIDTLYDHAVKLVASARAQPDRLYLASDGYEADEFKRTA
                     SRLIEMRSQSYLGLPHGPRHAADVDPTKIVET"
BASE COUNT          311 a          451 c          464 g          318 t
ORIGIN      
        1 gcgatcttct tgcaggcgtc gaccaggccc tgcacggcag cggccgattt ttcgaacatc
       61 gatcgttcgc cgctgttgag ttcaatctcg acgatgcgtt cgacgccctt ggcgccgatc
      121 acgaccggca caccgacgta gagatccttt atgccgtact caccgttgag ccaggcggca
      181 catggaagca cgcgtttctt gtcgaggaga taactctccg ccatcgcgat tgcggacgcc
      241 gccggtgcgt agaaagccga ccctgtcttg agcaggttga cgatttcggc gccgccgttc
      301 gcggtccgct tcacgatctc atcgacgcgc gcctgcgtgg tccagcccat cttcaccagg
      361 tccggcacgg gaattcccgc caccgccgag tagcggatga gcggcaccat ggtgtcgccg
      421 tgaccgccga gcacgaatgc ggttacgtct tccaccgaga cgtggaattc gtcggcaagg
      481 aaatagcgaa accgcgcgga gtcgagtacg ccggccatgc cgacgacttt atgctggggc
      541 agaccgcaac tcttctgcag cgcccacacc atggcgtcga gaggattggt aatgcagatc
      601 acgaaagagt ctggcgcata cttcttgatg cctgatccga cctgacccat aactttgagg
      661 ttgatgtcga gcaggtcgtc acggctcatg ccgggcttgc gcggaacacc ggcagtgaca
      721 atgcacacat cggcgccctc gatggaatcg taggtgttgg tgccggtaaa cttggcgtcg
      781 aaatcattca ccggcgaaga ctcggcgatg tcgagggcct tgccctgcgg aatgccctcc
      841 atgacgtcga acatcacgac gtcaccgagt tgtttcaatc caatgaggtg ggccagcgtg
      901 ccgccaatct ggccggcgcc gatcaacgca atcttgttac gcgccatggt gggaaagctc
      961 tcgatctatg tggccgccag gactggcggt ccaattgtgg ttggttagcc ggtcgggtcg
     1021 gacccgacaa taagcggaaa tgggtcagtt cctggcagtc caagtcttgt atacattata
     1081 ccaggatgac gccctgtcca gaggctagtc gtggtgccgc tgcacgaccg atccattgct
     1141 caggtctcga cgatctttgt tggatcgaca tcggctgcgt gccgcggacc gtgcgggagc
     1201 ccgagatagg attgcgaacg catctcaatc agacgtgacg ccgtacgttt gaattcgtcg
     1261 gcttcatagc catcggaagc aaggtacagc cggtcgggct gcgcccgtgc ggaggcgacc
     1321 aatttcaccg cgtggtcgta aagcgtgtcg atcaggatga tgaagcgctt ggcctcgttg
     1381 cgctgagcat gatgcataac cggaatatga tccaggatga tggtgtgaaa ctcatgcgcg
     1441 atcctgagat agtccgctgc cgccagcggc tgcaggcaaa gatcgtctaa cgaaaatcgc
     1501 gcaactccca tcgccgcttt cgggacacgg acagtatggc cttt
//
LOCUS       DATILV010000970        10046 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_492716, whole genome shotgun sequence.
ACCESSION   DATILV010000970 DATILV010000000
VERSION     DATILV010000970.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10046
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_492716"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1735
                     /gene="selB"
                     /locus_tag="VLJ17_23375"
     CDS             <1..1735
                     /gene="selB"
                     /locus_tag="VLJ17_23375"
                     /inference="COORDINATES: protein motif:HMM:TIGR00475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0001514 - selenocysteine incorporation
                     [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HSV25954.1"
                     /translation="PGHQRFIKNMLAGVGNVDHALVVVAADDGVMPQTVEHVEILDLL
                     GIARATVAITKIDRVTAGRRDEVEAEIRALLDNTCIEAGAFIHTSVRTDEGITALRLH
                     LVAVAQTHMAAPPTGRFRLAVDRAFILHGVGVVVTGSVHAGVAHVGATMTVAPTGHTV
                     RLRGLRIHDREVPSVQAGDRCAINLSGIELDDLRRGVWIIAGCNQATQRLDVELRLFG
                     RERPLRHWAAGHLHIGAEDLTCRVAFLAGKALQPDEPAVAALHIDRTIAAWAGQRFVL
                     RDQSAQRTLGGGRILDPLPPARQNSILRLARLHALRAPEAAAAFSKMLVASVRGFDFD
                     VFAQSWNLTEPECEALLAAHSAKVCQDKDARIVVNADHWHALLDQIIEVIGAHHGEHP
                     DLLGLNEARVHAAIRPLVSKSLLHHAIAELGDSGFLARRGTVIHLCGHQAKPTPTEVA
                     LWKRVEPALASNGVRPPRVRELVDQTGIALDPLESFLARAEQLGWVHRIASNRFFLPT
                     TLCELEQIARRLAAEGPDGTFVVADFNRVSGIGRNLTIQVLEYFDHIGFTQRHGDRRT
                     LLHALISAGRL"
     gene            complement(2276..3310)
                     /locus_tag="VLJ17_23380"
     CDS             complement(2276..3310)
                     /locus_tag="VLJ17_23380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25955.1"
                     /translation="MRVHIVGVAFFGIFAAAIGSPVHAWAQEFQMQEVPALPPLVAGA
                     LAPRTLLFTDHRKDELVDPVTGLIRFSDWERSRPQQKQLLSLFPSFEEPIVGGAEGAA
                     KPHKRRFHIYVAEARFALAKPAASIDLLKMITLAMLEQLDPSIKHRLISAADVIPNKD
                     PKSPNRNPQRQWCEGAGLICIQSKYQLEGRLPTAIALLNKIREDRKKIAEFMEFQSEL
                     RLVPPNEIDQAALVKATGVNAPIAGAIEQNIFHVNQVMQFGKFLAVLQSDPADARKSV
                     ATAFIALAVDSDLFEKKKELESVPILRNLVPAQVLAGNSSFNTGNSISAGLPKYSRNR
                     VKAVAALLEK"
     gene            complement(3352..6459)
                     /locus_tag="VLJ17_23385"
     CDS             complement(3352..6459)
                     /locus_tag="VLJ17_23385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HSV25956.1"
                     /translation="MDAILIKILAALLTLSLVTTRPDGVKTQFDPGRDQAEVVRILRD
                     GCAHMRKAFDVESLDIDDLIKTAMDDPDTISTEIKALHGLKFDSLLTVYRQFCKNEDI
                     KNSAVDIAEVIRFYNGAVADLPDPGRLKDARIASAGGVLDAKGERFADLTESNRRIWV
                     PLRDIPVNVQKAFIAAEDKRFYEHKGIDERGLVRAMVSNIARPGRPQGGSTITQQVVK
                     NLLVGDDVTYERKMREIIVASRLERSLTKSDILELYLNSIYLGRGAWGVELAARNYFG
                     KPAAALTLQEGALLAALPKGPTYYSPDRHPDRAQERLAYVVSRMQEDGVAGATAIDSA
                     KVSLPQMVAYTQAQQRDSGYYFLDHVTREARLLAGIGNLTAAGTTVRTTIRPDLQRAT
                     EMALQEGLAQYEIRTGRTEWHGAEANLTDAVRRIEASMPRAAPETRPVDAVAQPARNG
                     NAGKRAPGPGPSGTRAAAAPSGIVGPLPLNPATPPVAKPKPAWQQALEAAHLPLYDVH
                     WSTAIVLSNGSDRNGGGIRVGLADGRVMPLSSAGSAGRRGLNLYDVVFVKTGDAKGKP
                     GRVDLRVRPTVQGAAVILDNRTGGILAIAGGFSYPVSQLNRVTQAVRQPGSSLKPFTY
                     LAALRRGLQPNTLVRDQEVTLPPIGNSANVRERDYWSPKNADGGGGGITTLRRGLENS
                     KNLVTANLLDGGIDSDPSQSLARVCELTIDAQIYRDCIAYYPFILGAQPARLIDMAAF
                     YAAVAGEGLRPSPFSIESIEQNGRTVYTHKPELKWLASGDRPSFFQLRTMLQGVVARG
                     TARAIGHLSSYVGGKTGTSDDENDAWFIGFTNDVTIGVWVGYDNAEGKRRTLGNGQTG
                     GRVAVPIFEQIVEAAWASYARRTPLNPPSPDARKELVTMQIDLSSGNPLDERSAQGFT
                     EYFRLRHGQMEETQYFLVSPNEVATNELDDGEAHLRDPYGGDRGYYANSPFGGGYYSQ
                     RPNISGLFQGFGGLFLQPQRQILPPLGGGYGDLRSRSLEDRRWAPPRRVDPDVPWRDH
                     QRGDF"
     gene            complement(6724..7785)
                     /locus_tag="VLJ17_23390"
     CDS             complement(6724..7785)
                     /locus_tag="VLJ17_23390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine-2,3-aminomutase-like protein"
                     /protein_id="HSV25957.1"
                     /translation="MTINTLRTIAQLREAGLVPAAQTAALERVAARYAVAITPTVLEL
                     IDQGDPNDPIARQFIPDPAELDARPPERADPIGDDAFSPVEGIVHRYPDRVLLKLVHT
                     CPVYCRFCFRREMVGPGRRGGLTGEKRYAAYQYIRRHSEIWEVILTGGDPLVLPVSRV
                     RAAMRTLAKIDHVKIIRIHTRVPAVAPERITAELVAALRAPGKTTYVALHANHPRELS
                     PLARAACARIVDAGIPMLSQTVLLHGVNDDVETLSALMRAFVECRIKPYYLHHADLAP
                     GTSHLRTSIATGQDLMRRMRGRFSGLCQPAYVLDIPGGAGKVPIGPSYVAATRAGAEQ
                     GGYTVQGIKSDAHPYPPRK"
     gene            complement(7881..8918)
                     /gene="epmA"
                     /locus_tag="VLJ17_23395"
     CDS             complement(7881..8918)
                     /gene="epmA"
                     /locus_tag="VLJ17_23395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013532350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P lysine aminoacylase EpmA"
                     /protein_id="HSV25958.1"
                     /translation="MPQASPWWIPDIHADRQPFLRARGRVLTALRHYLEARDFAEVET
                     AILQVSPGNEAHLHAFATELVAPDGARQQLFLHTSPEFACKKLLAAGERRIFEFARVF
                     RNRERGALHHPEFTMLEWYRTGEPYEALMDDCTGFLAVAAAAAGTDRFSFRGRDADPL
                     AAPERLTVAEAFWHYAGIDLLATLEDRAPDRDGLAARARSAGIKLADDDSWSDIFSRV
                     LVECIEPRIGNGRATFLTEYPSQEAALARPKPSDPRVAERFELFICGVELANGFGELT
                     DPVEQRRRFEAEMARKERLYGEHYPIDEDFLAALSVMPRASGCALGFDRLAMLAARAS
                     RVEQVIWTPLQ"
     gene            9097..9663
                     /gene="efp"
                     /locus_tag="VLJ17_23400"
     CDS             9097..9663
                     /gene="efp"
                     /locus_tag="VLJ17_23400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018323088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HSV25959.1"
                     /translation="MKVIASSLRKGNIVDLDGKLYVILTAESIHPGKGTPVTQLDMRR
                     LSDGVKSSLRFKTTDQVERAHVEEREFQFLYQDGDGFHFMNMENYDQIAVSADIIGDQ
                     TVYLQPEMKVRLSVHEGAAVGIVLPPRVALEVTETEPTTKGQTASSSYKPAVLSNGLR
                     TSVPPHIVPGTRIVVSTEDGSYVERAKD"
     gene            9759..>10046
                     /locus_tag="VLJ17_23405"
     CDS             9759..>10046
                     /locus_tag="VLJ17_23405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding glutamate synthase family protein"
                     /protein_id="HSV25960.1"
                     /translation="MRMLRLAFTPRFVVYTLSILFTAALLLTVLAYPSAFGIAAIPLA
                     VFAWLTVLGTRDLIQTRHAVLRNYPISAHLRFLLEEMRPEMRQYFFESEKDG"
BASE COUNT         1937 a         3050 c         3073 g         1986 t
ORIGIN      
        1 gccgggccat cagcgcttca tcaagaacat gctggccggc gtcggcaatg tggatcacgc
       61 cctcgtggtg gttgccgccg atgacggcgt catgccgcaa actgtcgagc atgtggaaat
      121 tctcgatctt ctcggtattg cgcgggcaac cgtcgcgatc accaagatcg acagagttac
      181 ggcaggacgc cgcgatgagg tggaagcgga aatccgtgct ctgctcgaca atacgtgcat
      241 cgaggcggga gcgttcatcc atacctcagt ccgcaccgat gaagggataa cagcgttgcg
      301 ccttcatctc gttgctgtgg cgcaaaccca catggcggct cctcccaccg gccgatttcg
      361 cctggcagtc gaccgcgcgt tcatcctgca tggcgtgggc gtcgtggtga cgggctccgt
      421 tcacgcgggc gtcgcccacg tcggcgcaac catgacggtt gcgcccaccg gtcatacggt
      481 acgcctgcgc ggattgcgta tccacgaccg cgaagtcccg tcggttcaag ccggcgatcg
      541 ctgtgctatt aatctttctg ggatcgaact ggatgatctg cggcgcggtg tttggatcat
      601 cgctggctgc aatcaggcga cccagcgcct cgatgtcgaa ttgcgccttt tcgggcgcga
      661 acggccgctc cgccattggg ctgcgggcca cctgcatatc ggcgctgagg atctcacctg
      721 ccgtgtcgcg ttcctcgccg gcaaggccct ccagccagac gagcctgccg tggcggcact
      781 ccacatcgat cggacgatcg ccgcatgggc gggacagaga ttcgtcctgc gcgatcaatc
      841 ggcgcagcgc acccttggcg gcgggcgcat cctcgatccg ctgccgccgg cacgccagaa
      901 cagcatactg cggctggcgc ggctccatgc gctcagggca cctgaagcag cggcggcatt
      961 ctccaagatg ctcgtggcat cggttcgcgg ctttgacttc gacgtctttg cacagtcgtg
     1021 gaatctgacg gagccggaat gtgaagcgct acttgctgct cactcagcca aggtttgcca
     1081 agacaaggac gcacggatcg tcgtaaacgc cgatcattgg catgcgttgc tcgaccagat
     1141 cattgaggtg attggcgctc atcacggcga gcaccccgat ctgctcgggc tcaacgaggc
     1201 gagggtgcac gcagctattc gacccttggt ctcgaaatcg ctgctgcacc atgccatcgc
     1261 ggagcttggc gattctggct tccttgcacg tcggggcacc gtcattcatc tttgcggcca
     1321 ccaggcaaag ccgacgccaa cggaggttgc cctgtggaaa cgcgtggaac cggcgctagc
     1381 tagcaacggt gtgcgcccgc cgcgggtgcg agagttggtt gatcagaccg gcatcgcgct
     1441 cgacccgctc gaatcgtttc tcgcccgcgc agaacagttg ggctgggtcc atcgcatagc
     1501 atcaaatcgg ttttttctgc cgacaacgct ttgtgagctg gaacagatcg cgcgacgcct
     1561 tgcggcggaa ggtcctgacg gcacatttgt agtggccgat ttcaatcgcg tcagcggcat
     1621 cggacgtaat ctgaccatcc aggtgctgga atatttcgat cacattggtt tcacgcaacg
     1681 ccatggtgat cgccgcacgc tgctgcatgc gcttatttcg gcaggccgat tgtgaaccgc
     1741 aacgcccttc gatccgcaaa ccgcggacgg atgctggggg aattccaaag agccgcgctg
     1801 ctggatgcgc gttgccgcat tgcggcccac cgagacggcg ggttaaggag aaccccacga
     1861 tgtccgaaaa aggttgcgtg cggattgtcc ccatcttgcg cgagatcgga cgggatgccg
     1921 gaggcaggaa attgtcgccg ttaaattgcc aatgcgggta atcggagcaa aacggcaaca
     1981 gctatcggcg gacaatgtcg ggggaattcg gcacgtcgaa cggctggacg gccaggcgaa
     2041 aggatcacgg aaaatctccg gaggagaacg gtcgatcgag acaatctcgg tcgttagacc
     2101 gcgctagcac tttaaaatgc gccacagaaa ggctggcgcc caggtaacgc cggattcgat
     2161 cactctcaag tgaatcgatg atcctcgacc gaatcgcacc cgaattcgtc aagatcgggt
     2221 atcagcgcgg gcacccccgg cgggtggacg tcgcaatcga tcggcttcac ggacctcact
     2281 tctccagcag cgccgctacc gccttaacgc gattgcggga atatttgggc aggccagcgc
     2341 tgatcgaatt tccggtgttg aacgagctgt tgccggcgag cacttgcgcg ggcaccagat
     2401 tgcgcaggat ggggacgctt tccagctcct ttttcttttc gaatagatcg ctgtcgaccg
     2461 caagcgcaat aaaggccgtc gcaaccgatt tcctggcgtc ggcaggatca gattgcagca
     2521 cagccaggaa tttgccgaac tgcatgactt ggttgacatg gaagatgttc tgctcgatcg
     2581 cacccgcgat gggggcgttg acgccggtcg ccttgacgag cgccgcctgg tcgatctcat
     2641 ttggcggaac cagccgcagc tcgctctgaa attccatgaa ctcggcgatc ttcttgcgat
     2701 cttcccggat tttgttcagc agcgcgatgg cggtcggcaa ccgcccttcg agctgatact
     2761 tggattggat gcagatcagg ccagcgccct cgcaccattg acgctgaggg ttgcggttcg
     2821 gtgacttcgg gtccttgttc gggataacgt cggccgccga gatgaggcga tgcttgatcg
     2881 agggatcgag ctgctcgagc attgcaagcg tgatcatctt caacaggtcg atcgatgcgg
     2941 ccggcttggc aagcgcgaaa cgtgcctctg ccacatagat gtgaaaccgt cgcttgtgcg
     3001 gcttggcagc cccttcggcg ccgcccacta tcggttcttc aaacgaagga aacagactca
     3061 gcaattgctt ctgttgcggt cgcgagcgtt cccaatccga aaaacggatg agcccggtaa
     3121 ccggatcgac gagctcatcc ttacgatgat ccgtgaacag gagagtgcgc ggtgccaatg
     3181 cccccgcaac caacggcggc agggctggaa cttcctgcat ttggaattcc tgggcccagg
     3241 catgaaccgg cgagccaatc gcagctgcga aaattccgaa aaatgcaacg ccaacgatat
     3301 gcactctcat tgagtttagg cccttctcgc gatcgctatc gcggtcccat cttaaaagtc
     3361 gccacgctga tggtcgcgcc acggcacgtc ggggtccaca cgacgaggtg gagcccatct
     3421 gcggtcctcc aaacttcggg agcgcagatc gccatatccg ccgccaaggg ggggaaggat
     3481 ttggcgttgc ggttgcaaga ataggccacc gaacccctgg aacaaaccgc tgatgttcgg
     3541 acgctgtgaa taatagccgc cgccgaacgg actgttcgca taatagcccc ggtcgccgcc
     3601 gtatggatcg cgaagatgag cctcaccgtc atcaagctcg tttgtcgcaa cctcgttcgg
     3661 cgataccaga aaatactgag tctcctccat ttgcccgtgc cgcagccgga aatattccgt
     3721 aaacccctgt gcgctgcgtt catccagcgg gttgccgctg ctgaggtcaa tctgcattgt
     3781 cacgagctct tttcttgcgt caggcgatgg cggattgaga ggcgtcctgc gagcgtaact
     3841 ggcccaggcc gcttcgacga tctgctcaaa aatcggcact gccacccgtc cgccggtctg
     3901 gccattgccc agtgttcgac gtttaccctc ggcgttgtcg tatccgaccc agacgccgat
     3961 cgtcacgtcg ttggtgaagc caatgaacca agcgtcgttt tcgtcgtcgc tggtgccggt
     4021 cttgcctccc acataggatg acaggtgtcc gattgcgcgc gcagtgccgc gagccaccac
     4081 gccttgcagc atggtgcgta gctggaagaa cgacggccgg tcaccagagg caagccattt
     4141 cagttcgggc ttgtgggtgt agacggtgcg gccattttgt tcgatcgact cgatgctgaa
     4201 gggcgagggg cgaagaccct caccggcaac tgccgcataa aacgccgcca tatcgatcag
     4261 ccgggccggc tgggcgccga ggatgaacgg ataataagcg atgcagtcgc gatagatctg
     4321 cgcatcaatg gtcagttcgc agacgcgtgc caggctttgg ctaggatcgg aatcgatgcc
     4381 gccgtccagc aggttggcgg taacaaggtt tttcgaattc tccaatccgc gccgcaaggt
     4441 ggtgatgcca ccgccaccac cgtcagcgtt cttgggcgac cagtaatccc tttcccgcac
     4501 atttgcggaa ttgccgatcg gcggcaaggt cacctcctgg tcccgcacca gggtattggg
     4561 ctgaaggccc cggcgcagcg ccgccagata ggtgaatggt ttgagcgacg agcccggctg
     4621 gcgcaccgcc tgggtcacac ggttgagctg actgaccgga taggagaagc cgcccgcgat
     4681 ggcgaggatg ccgccggttc tgttgtcgag aatgacggcc gccccctgaa cggtcggccg
     4741 cacgcgcaga tcgacccggc ctggcttgcc tttggcatcg ccggtcttca caaatacgac
     4801 gtcataaaga ttgaggccgc ggcggcccgc cgacccggcc gaagatagcg gcatcacacg
     4861 accgtccgcg aggccgacgc gtatgcctcc gccattacga tcactgccat tcgaaagcac
     4921 gatcgcggtc gaccaatgta cgtcgtagag tggcagatgc gcggcttcga gcgcctgttg
     4981 ccaagccggc ttcggcttgg caacaggcgg tgtcgcgggg ttcaacggta gtggcccgac
     5041 gatgccggat ggggcagcag cggccctggt gccagacggt cctggacctg gcgcgcgctt
     5101 tccggcgtta ccgttgcgtg ccggttgagc aacggcgtcg accggacggg tttccggagc
     5161 ggccctcggc atcgacgctt caatgcgtcg caccgcgtca gtaagattgg cctctgcccc
     5221 gtgccattcg gtgcgtccgg tacgaatctc gtattgggcc aagccctcct gcagggccat
     5281 ctctgtggca cgctggaggt ccggacgaat tgtggtgcgc accgtcgtgc cagctgccgt
     5341 caggtttccg atgccggcga gcaatcgcgc ttcgcgcgtg acgtggtcga ggaaatagta
     5401 tccggaatcc cgctgctgag cctgggtgta ggcaaccatt tgcggcaacg aaaccttggc
     5461 gctgtcgatc gcggtggcgc cggcaacgcc gtcctcctgc atccggctca ccacatacgc
     5521 gagccgttct tgagcgcgat cgggatgccg atcggggctg taataggtcg gccccttggg
     5581 gagggccgcc agcagggcgc cttcctgcaa agtcaaggcg gcagccggtt taccgaagta
     5641 attgcgcgcc gccaactcga ccccccacgc gccgcggccg aggtaaatcg agttgagata
     5701 gagctccaag atgtcggatt tggtcaggct acgctccaag cgagacgcga cgattatctc
     5761 ccgcatcttg cgctcatatg taacgtcgtc gccgaccagc aagtttttta cgacctgctg
     5821 agtgatcgtc gaaccgccct gcggtcggcc gggacgcgca atgttagaca ccatagcgcg
     5881 aaccaggccg cgctcatcga tgcctttatg ttcgtaaaag cgcttgtcct cggctgcaat
     5941 gaacgctttt tggacgttca ccggaatatc ccgcagcggc acccagatgc ggcggttact
     6001 ctcggtaaga tcggcgaagc gctcgccctt ggcatcgagg actccaccgg cactggcaat
     6061 gcgggcatcc ttgagacggc cgggatccgg aaggtcggca acggcgccgt tatagaaccg
     6121 gatcacctcc gcgatatcca cggcagaatt cttgatgtct tcattcttgc agaattgcct
     6181 gtagaccgtg agcaggctgt cgaatttcaa gccgtggagc gccttgatct cggtcgagat
     6241 tgtgtccgga tcatccatcg cggtcttgat gagatcgtcg atatcaaggg attcaacatc
     6301 gaaggcctta cgcatatggg cgcagccgtc gcgcaatata cgaaccacct cggcttggtc
     6361 gcgccccggg tcaaattgcg tcttgacacc gtcggggcgc gtagtgacca agctgagcgt
     6421 gaggagcgcc gccaatatct taatgagaat tgcatccatg aattcaagca gtccggttgc
     6481 agcccgtgta tgtcgcagcc cccagtatat cgcatgatcg accgatagcg cattcccacg
     6541 acggcttttt tagggtcgct atccgggctc gcggggcgat cggccctggc gctgagcttt
     6601 gttagcatag catttcgaaa gcttttctta accttggtgc aaggcgtgcg cggttcaccc
     6661 atgcggccgc tcaattacca tacggcacat cgtaatacgt aaaacccgaa gatgacagcc
     6721 ggttcacttg cgcggcgggt aggggtgcgc gtcgcttttg atcccttgca ccgtgtagcc
     6781 gccctgttct gcaccggctc ttgttgccgc gacatagctg ggcccaatcg gaaccttgcc
     6841 agcaccacct ggaatgtcga gcacataggc cggctgacac aggccggaaa aacggccgcg
     6901 cattcgccgc atcaggtcct gaccggttgc gatcgaggtt cgcaagtggc tggtgccagg
     6961 cgctagatcg gcgtgatgta gatagtacgg cttgatccgg cactcgacga aggcgcgcat
     7021 cagggcactc agggtttcga catcgtcatt cacaccatgg agcagcacgg tttggctgag
     7081 cattgggatg ccggcatcga caatacgggc gcaggcagcg cgggccaaag gggacaattc
     7141 gcgaggatgg ttggcatgaa gcgccacgta ggtcgtcttt ccgggtgccc tcagggccgc
     7201 caccaactca gccgtgatcc tttcgggcgc cacggccggc acacgcgtat gaatccggat
     7261 gatcttgacg tggtcgatct tagccagcgt tcgcatcgcc gcacgcacgc gggaaaccgg
     7321 caacaccagc ggatcgccgc ccgtcaagat aacctcccaa atctccgaat gccgcctgat
     7381 gtactggtag gccgcgtaac gcttttcccc agtaagccct ccccgtctgc cgggcccgac
     7441 catttcgcgg cgaaagcaga accggcaata gacggggcag gtatgcacga gcttcaggag
     7501 aacccggtcg ggatagcgat gaacgatgcc ctcgaccgga ctgaatgcat cgtcgcctat
     7561 tgggtcggcg cgttccggtg gacgggcatc aagctcggcg ggatcgggta tgaattggcg
     7621 cgcgatcgga tcgttcgggt caccctgatc gattagctcc agcactgtag gggtgattgc
     7681 gacggcatag cgggcagcca cccgctcgag tgccgcggtt tgcgcggccg gcaccaaccc
     7741 ggcctcccgc aattgcgcga tggtgcgcag agtgttgatc gtcatccgtt gcccttagca
     7801 gcccagaaga ccgcgcgcac ccatataatc tcccggcagg tggcgacccg tgcgtcgttt
     7861 cattggtcca gtggcgcgcc ttactgcagc ggcgtccaaa tgacctgctc gactctggag
     7921 gcccttgccg cgagcatcgc gagccggtcg aatccgagtg cgcaaccgct tgccctcggc
     7981 atgaccgaga gggcggcgag gaaatcttca tcgatcggat agtgctcgcc gtaaagccgc
     8041 tccttccttg ccatttcagc ttcaaaccgt ctgcgttgct cgaccggatc ggtaagctcg
     8101 ccgaatccat tggcaagctc gacgccgcag atgaacagtt caaaacgctc cgcaacacgc
     8161 ggatcggaag gtttgggccg cgccagcgcg gcctcctggc tcgggtactc ggtcagaaag
     8221 gtggcgcgcc cgttgccgat ccgaggttcg atgcactcca cgagcacgcg gctgaaaatg
     8281 tcgctccaac tatcgtcgtc agcgagtttg atgccggccg accgagcccg tgcggctaat
     8341 ccgtcgcggt ccggtgctcg atcttcgagt gtcgccagca gatcgatccc ggcgtagtgc
     8401 cagaaagctt ccgcgaccgt gagccgttcc ggggccgcca gtggatcagc atcgcggccg
     8461 cggaacgaga atcggtcggt cccggcggct gcggctgcga cggcgagaaa gccagtacaa
     8521 tcgtccatca gggcttcgta tggctcaccc gtgcggtacc attccagcat ggtgaattcc
     8581 ggatggtgca gcgccccgcg ttcacgattg cgaaacacac gggcgaactc gaaaatgcgc
     8641 cgctcgcccg ccgccagcag cttcttgcaa gcgaattccg gcgatgtgtg caggaagagc
     8701 tgctgccggg cgccatccgg cgcaaccaat tcggttgcga aggcatgcag gtgggcctcg
     8761 ttgccagggg agacctgcaa gatcgctgtc tccacctcgg caaagtcgcg cgcctccaga
     8821 taatggcgaa gcgcagtcag cacgcgccct cgcgcccgca ggaaaggctg ccgatcggca
     8881 tgaatgtcag gtatccacca tggggaggct tgcggcatgg gggcctacac gtcggcagcc
     8941 gagatctggg cgcctaattt cgactgcgca catttggcga aattactggc gccgaggcgc
     9001 aggatcagta tgttgcggac catcattccg gcggcggaag cccaatcggc cgtccgcttt
     9061 accgtccggc tctttaccga tcgaggaatt gtgcccgtga aagtcatcgc cagctcgctc
     9121 cgcaagggaa acatcgttga tctcgatggc aagctctacg tgatcctgac cgccgaaagc
     9181 atccaccccg gcaagggaac gccggtcacc cagctcgata tgcgacgatt aagcgacggc
     9241 gtgaagtcct cgctacgctt caagacgacc gatcaggtgg aacgcgccca tgtggaagaa
     9301 cgcgaatttc agttcctcta ccaggatggt gatggtttcc atttcatgaa catggaaaac
     9361 tacgaccaga ttgccgtttc ggcagacatc atcggcgatc aaaccgtgta tcttcagccg
     9421 gagatgaagg tccggctgag cgtccatgaa ggcgcagcgg tcggcatcgt gctgccgccg
     9481 cgggttgccc ttgaggttac cgagaccgag cccactacca aggggcagac ggcatcgtcc
     9541 tcctacaagc cggcggtgct ttcgaacggg ctacgaacct ccgttccgcc tcatattgtc
     9601 ccgggtaccc ggatcgtggt ctcgacggag gatggttcct acgtggagcg cgccaaggat
     9661 tgactcattg gccactcggt agcgtggaca aggttgtatc gagagaaacg gcccgataag
     9721 gatcccaaag tcgcctcgca gcccgatagg gggcactcat gcgcatgctc cgtctggcat
     9781 tcacaccccg ttttgtcgtc tatacgctga gcattctgtt caccgccgcg ctgttgctca
     9841 ccgttttggc gtatccgtcg gcattcggta tcgcggcgat tccgttggcg gtatttgctt
     9901 ggctgacggt gctcggtacc cgcgacctca tccaaacgcg ccatgcggtg ctgcggaatt
     9961 atccaatctc ggcacatctg cggtttctgc tcgaagagat gcggccggag atgcgccagt
    10021 atttcttcga aagtgagaaa gacggc
//
LOCUS       DATILV010000971         3466 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4583339, whole genome shotgun sequence.
ACCESSION   DATILV010000971 DATILV010000000
VERSION     DATILV010000971.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3466)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3466)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3466
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4583339"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1130)
                     /locus_tag="VLJ17_23410"
     CDS             complement(<1..1130)
                     /locus_tag="VLJ17_23410"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV25961.1"
                     /translation="MNDKTGKLLVVESDDALREQIVAVLSGAGYEVSTDYREGMKAFL
                     AFDPDAVVLGADPPQLDCCGLLSEIKSSERTHDIRVVMLSPGGSAERTRGLDLGADDV
                     LSLPFDSHELLARVRSQVRSKYVADEFRERLRLADENRSAAQQVVTAVNEERRTLRVG
                     GLAAVAVLIVAGLVFFVVYRRTQEQSTRVYAAISRLQTGVLTEQKLMERSRRALEDTE
                     HGQARASDPQKLELQKKSEDLKSQIAVSKPENASALHSQLAAVESRLQKLETEGKVAQ
                     TIIQSYEPSVCLIHVVLAFREPTTGLRLHYAALTSSGEPTTDEHNNPLLSLSGSGPEV
                     HLNVFGTGFLASANGQILTNHHVAEPWWQDDDMKQMLDQGLEP"
     gene            1551..1949
                     /locus_tag="VLJ17_23415"
     CDS             1551..1949
                     /locus_tag="VLJ17_23415"
                     /inference="COORDINATES: protein motif:HMM:NF015898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HSV25962.1"
                     /translation="MKEPRLSKAETRILEQYWKLGTASVREVLESLPEDERVAYTTVQ
                     TLVYRLEEKGALRKVKKIGNAQLFEPAINQSQHRGRLVHELLDLFGGSPRLLVSNLLE
                     NGTLSLRDLKALQSAARNDKSGRSRGGKRA"
     gene            1942..2871
                     /locus_tag="VLJ17_23420"
     CDS             1942..2871
                     /locus_tag="VLJ17_23420"
                     /inference="COORDINATES: protein motif:HMM:NF017390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M56 family metallopeptidase"
                     /protein_id="HSV25963.1"
                     /translation="MHEHIARVMYYFSVHLLYASGVGAAAWVLTSIRGASATTKYWIW
                     VVTAFNFIVPVGGVVDKVFALHLRWAAPLSALGGPIWELTQGRMAVVLAAIWIVGTFA
                     MLMRLTSRLRREDREAQIAHSLSVNDAASGFITDGIRVSFDPRHPAPAVSGIFYPCIL
                     LPIGIDRLLNQREFDAVLLHELAHARRRDNLIRVLHELSLCILWFHPLLWLAGAKMSL
                     YRELSCDETVIQRAHGTDLVAALAKLAVPERALSLQATASSHLNHRLAWLSGQLQARR
                     AASLLLASLFAAVMAAAIFGTVAHTACCFILRH"
     gene            2991..>3466
                     /locus_tag="VLJ17_23425"
     CDS             2991..>3466
                     /locus_tag="VLJ17_23425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25964.1"
                     /translation="MRACAALLVLLFVAQVATLQLRGQSTASVTLVKAARLLDPRTGN
                     VLAPAAVLIEGDKVKQVGPSAQLTAPAGSRIIDLAAETLLPGLIDSHTHLFLDIIVPP
                     ELEQHRHYNGLFAPGMVLAIIESPSKRVLMGAQLAREDLDSGITTVRNLGHSGVDG"
BASE COUNT          714 a          993 c          969 g          790 t
ORIGIN      
        1 ggctcaagac cttgatcgag catttgcttc atatcatcat cctgccacca aggctcggcc
       61 acgtgatgat tggtgaggat ttgtccgttg gcggaggcga gaaaaccagt gccaaaaaca
      121 ttcaggtgta cttcaggacc gctcccacta aggctcaaga gcgggttgtt atgttcgtcg
      181 gtcgttggtt cgccactgct cgtcagtgca gcgtagtgca atctcaatcc cgtagtgggt
      241 tcgcggaagg caagcacaac atggatgagg cagacgctcg gctcatagga ctggataatc
      301 gtctgcgcaa ccttgccttc ggtctcaagc ttctgaaggc ggctttctac tgccgctaat
      361 tgactgtgta aagctgaagc gttttctggc ttgctgaccg caatttgcga tttcaggtct
      421 tcgctcttct tctgaagttc tagcttttgt ggatcgctcg cccgggcttg accatgttcc
      481 gtatcttcaa gggctcgacg ggagcgctcc atcaactttt gttccgtcaa aacgccagtc
      541 tgtaatcgac tgatcgcagc atagacccgg gtactctgtt cctgggtgcg ccggtagacg
      601 acgaaaaaga ccaggccagc aacgatcagc acggcaacag ccgccaggcc gccaacccga
      661 agcgttcgcc gttcttcgtt gactgctgtc actacctgct gggcggcact tcgattttcg
      721 tccgcaaggc gaagccgctc tcgaaactcg tccgcgacgt atttgctccg cacttgcgaa
      781 cgcacccgcg ccagcaattc gtgtgagtcg aaaggcagtg acagcacatc gtcggcgccg
      841 agatccagcc ctcgagtgcg ctcggctgat cctcccggag aaagcatgac gacgcgtatg
      901 tcgtgagtgc gctcggaact cttgatttcg gaaagaaggc cacagcaatc gagttggggc
      961 gggtcggcac ccagcacaac cgcgtcggga tcgaaggcaa gaaatgcctt cattccttcc
     1021 cggtagtcag tcgaaacctc atatcccgca ccgctcagca ccgcgacgat ctgctctctg
     1081 agagcgtcgt cagactccac taccaacaat ttccctgttt tgtcgttcat aacgcccgtc
     1141 tcttaggatg gtcccagagg gtcgcaggat tcaattcggc cagagattga aatacctatt
     1201 gagaccggcg cgtctctctg gctgcatgaa tacgtgagct gctctagtca actcacgcaa
     1261 aacggcgaaa cgcatccatc ctgcgactcc gtctaggtgt ggtccaactc ggcggcagtt
     1321 tgcccttgat tcgcatttgc tcgttcgcgg ggagcgcccg atgtgggcac aaccgcaaaa
     1381 gcgtcactct tttaacttcg gagtggccga tcaacacgaa ctgactgttt ttgtgatcgc
     1441 gagcgtttaa gcggtaccca agcacaagct tgtttttgcc gcatcccgga agaagaacca
     1501 tgccgatatc ccgcttcttg tagtagcatt gccggagcga gtaggagatt atgaaagaac
     1561 cgcgtctttc aaaagccgag actcgcatcc tggaacagta ctggaaactg ggaactgcgt
     1621 ctgtgcgtga ggtgttggaa agcctgcctg aagacgaacg tgtcgcttac accaccgtgc
     1681 aaacgctcgt ctataggctt gaggagaaag gcgcgttgag gaaggtaaaa aagatcggca
     1741 acgctcagct ctttgagcct gctatcaatc aaagccaaca ccgcggcagg ctcgtacacg
     1801 aattgctgga tctgtttgga gggtcgccgc gtcttctcgt ttccaatctg ctcgagaatg
     1861 gcaccctcag cttgcgggac ctgaaggcgc tgcaaagtgc ggcacgcaac gataagagcg
     1921 gccgcagccg tggaggcaaa cgtgcatgag catatcgcac gcgtgatgta ctacttcagc
     1981 gtccacctgc tgtatgcatc cggcgttggt gctgctgcgt gggtactgac gtcaattcgg
     2041 ggtgccagcg ccaccacgaa atattggatt tgggtcgtca ccgcattcaa tttcattgtg
     2101 ccggtcggcg gagtcgttga taaggtgttt gcactgcact tgcgatgggc cgccccgctc
     2161 agtgctctcg gtgggccgat atgggaattg acacaaggcc gcatggccgt ggtgcttgcc
     2221 gcgatatgga tagttggcac attcgccatg ctaatgcggt tgacctcgcg ccttcgcaga
     2281 gaagaccgcg aagctcaaat cgcgcatagt ctgagcgtca atgatgcggc gtctggtttc
     2341 ataacagacg gcatccgggt gagcttcgat ccccggcatc ccgcccctgc agtcagtggg
     2401 atcttttatc cctgtatcct gctccccatc ggaatcgatc ggttactcaa tcagcgggaa
     2461 ttcgatgctg tcctgcttca cgaacttgcc cacgcacgaa ggcgcgataa tctgatccgc
     2521 gtactccacg agctttcgtt atgcatcttg tggttccatc cgctcctctg gttggctgga
     2581 gcgaagatgt cgctctatcg cgagctctct tgcgatgaaa ctgttatcca gcgtgcgcat
     2641 ggaacagatc tggttgcagc gctggcaaaa cttgcagtcc ccgaacgagc gctctccctg
     2701 caagcgacag cctcgtcaca tctaaaccat cgcctggcct ggctgtcagg ccagctgcaa
     2761 gcgcggcgcg cagcaagcct gctgctggcg tcgctatttg ccgctgttat ggccgcggcc
     2821 atctttggaa ccgtagcaca taccgcctgc tgtttcattc ttcggcattg actccggccg
     2881 gcatcctcgc tcccaagctg tatagttgca gatacaacgt atattgtagt agcatcaccg
     2941 ctatgcgtag gagagtcgag gttggggtgc cacacgagcc acaaaatcga atgcgagcgt
     3001 gcgccgcgct tttggtgtta ttgtttgtgg cgcaggttgc gacgctgcaa ctgcgcggcc
     3061 aatcgactgc ttccgtcact ctggtcaaag ccgcgcggct gctcgatccg cgcaccggga
     3121 atgtgcttgc gcctgccgct gttctgatcg aaggggacaa ggtcaagcag gttggaccgt
     3181 ccgcgcaact aaccgctccc gccggctcaa gaattatcga cttggccgcc gaaaccttgc
     3241 tcccgggatt gattgacagc cacacccacc tattcctcga cattatcgtg ccgccggaac
     3301 tggaacagca ccgccattac aacggattgt tcgctccggg gatggtgctc gccatcatcg
     3361 agtcgccaag caaacgcgtg ctgatgggcg cgcagttggc tcgagaagat ctggatagcg
     3421 gtatcacgac ggtccgcaac ctgggtcatt cgggggttga tgggga
//
LOCUS       DATILV010000972         7801 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4333378, whole genome shotgun sequence.
ACCESSION   DATILV010000972 DATILV010000000
VERSION     DATILV010000972.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7801)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7801)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7801
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4333378"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            80..292
                     /locus_tag="VLJ17_23430"
     CDS             80..292
                     /locus_tag="VLJ17_23430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25965.1"
                     /translation="MRNLFRSEYHKRRGEVEDADGSDPLLRCLSGTAEFREALKLLPA
                     KQCELPILIGASGFPYEEAAQTIQGG"
     gene            complement(609..2435)
                     /gene="glmS"
                     /locus_tag="VLJ17_23435"
     CDS             complement(609..2435)
                     /gene="glmS"
                     /locus_tag="VLJ17_23435"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HSV25966.1"
                     /translation="MCGIVGILGRAPVANQLVESLKRLEYRGYDSAGIATLENGQLAR
                     LRAEGKLKNLHDRLVGTPLVGAIGIGHTRWATHGRPSEINAHPHATEVVAVVHNGIIE
                     NFRDLRRGLEANGVTFRSETDTEVIVHLVSDEFKAGRSPVDAVAAALPRLRGAFALVF
                     LFAGEPNLLIGARKGSPLAVGHGDGEMYLASDAIALAPLTGTISYLDDGDLVVVRRDA
                     IEVRDARGQIATRPTIKSVASALLVDKGNYRYFMTKEIYEQPEVVNHTLTHYLDVGAE
                     RVRLPTKLPFNFADISRISISACGTAYYAGLVAKYWFEQFARLPVEIDIASEFRYRAA
                     PLRPGDVSIFVSQSGETADTLASLRYAKEQQQHILSIVNVQTSTIARDSDVVMPTLAG
                     PEIGVASTKAFTCQLTVLACLAIAAGLARGVLSGAQERSLVQALIDVPRLMIDALGLE
                     QEIELVVRHLFRSRDVLYLGRGTSYPLALEGALKLKELSYIHAEGYAGGELKHGPIAL
                     IDDTVPIIVIAPYDHVFEKIASNTQEVAARGGRIILLTDRQGAREIAVEPNVTLVLPD
                     MPAFVTPLVYAIPLQLLAYHTAVIKGTDVDQPRNLAKAVTVE"
     gene            complement(2574..3437)
                     /locus_tag="VLJ17_23440"
     CDS             complement(2574..3437)
                     /locus_tag="VLJ17_23440"
                     /inference="COORDINATES: protein motif:HMM:NF024934.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HSV25967.1"
                     /translation="MDVQQNNLVDSSQSMPVTQSTAGTRPDRKDKVHLMDAICARGER
                     VCLRPQQRVQLPPAGKMAILSDGLLAIDAMPAKGKLQILDFLVAGDIVTASIVLRTPG
                     VSLRAISSASLVSFDHRVIDLDPAACEYWASLSAQYQNQLARVNIHQLMIGRLETEPR
                     VASFLLALALADISGQACGLNVTLPMSRTDIANYLVINSDTLSRTMMKFSDLGLIKRV
                     SRHLIRILDIERLRKISPLAPLLSAVFEKGISQHGDWSGHSSIGAFISSGHSNHAVLC
                     RSATTPVHCPV"
     gene            4011..7784
                     /locus_tag="VLJ17_23445"
     CDS             4011..7784
                     /locus_tag="VLJ17_23445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25968.1"
                     /translation="MATTIGNLITLDGLFTDWPAADSVMNSGNTVAGYQVYGALIADA
                     TLGNNYVIGIDATAPTDPVIAANTFIYLNTDQNTATGYSPFGAIGAEYYVQFSTGSTG
                     TLQPFLYSVTSTGVATQLNGGAPLNFGVSANGESVEIAIPQTLLTPTAGAAPKSINFA
                     ASIDNGVAALPGDFSSNPQYTITDPSTLVPVNHAIKKVGIVYSATTAALYFGGGQAGQ
                     TAYADLFMAAQHQAEAAGVSYDILTEADLSNVAKLAQYSALVFPDMQNVQSSQVSAIV
                     GALSQVVYNYHVPIITAGDFLTNDQTGAALPGNPYINMQTLLDLRQTGFGTATYSVTP
                     DGTALANHNPVMAGYAAGEHIGGASGQFAGTTAGLYTNTGYLTFSGVTKPATVLADIN
                     IQGGASLAGVVQTTTGGTNTHFATTGLLGDSNLLQHAIQNAVFGTTPSLSLDITRMAG
                     VVGSRTDMDQSQFPSDVSPGPGQPGIYDELIPMLQQWKQQFNFVGSFFINVGDNANPA
                     NENLTNWAVSKPYYDAILAMGSEIGNHSYTHLINPPAVDANGNPVPTTIINGQVVSTW
                     DENTNTLYVTPPANGSAPNWTFNYEFGQSKTIEQQNLGITIAGAAVPGAAETIGTSEQ
                     IMKFYQTVAGGLTGYVSGGWTGVGSGYPNAFGYMSPTDTGSVYIAPNITFDFTEVEFQ
                     KKTPTQALADWEALFQQLSAHSQVPVIVWPWHDYGPTNWPTNGTAVGPGYTTQMFTDF
                     IAFAFGAGYEFVTDEDLAARIAAQQKAILSETTTGNVITATVTPDPTAPDLGAMALNM
                     INGAAGQVIQNAGSWFAYDTNSIFLPKAGGKFVVTLGAAQDDVTHIDALPMRADLQTV
                     TGNGTNLAFSMTGDGVVDVHVKTPGANIVSVQGAPAASLTGTDLSLTFDDGALAISPT
                     SPQGVPVLHNVTISEGPAAVLSTGTNSLFGGSGTNVLTLTGLYENYTTQLNPDGSETI
                     TDTRAGRPDGTDIAHNFQDFQFADGLALTAAQITGTGLLLGTSGADTLTSALPGEVVL
                     GLAGNDTLRAGAANQVLDGGTGANTFNDNGFGGVTLIGDGGNDTFVVSNAATKVLEMP
                     NTGTATVDTNLSTYVLPSNVENLVYTGILGINATGNALNDTFSGFVGSSTVTGGAGAD
                     TFAFAPVNPVSIPLLGVYIAGFGNASITDFTADMTNANHDVLSLSASMFAPGTTAAAL
                     VGGTAHNAAGGAVTVAQVGANVSIAVDLTDAIVLNNVSLAVLKAGAAADIHFA"
BASE COUNT         1677 a         2369 c         2201 g         1554 t
ORIGIN      
        1 cgatctggtg caggagaccc tgctgcgaga atgggccaaa gtagcctgac accacacgtc
       61 cgcctggtta tttacgatct tgcgcaacct gttccgctcc gaatatcaca agcgtcgtgg
      121 tgaagtagag gacgctgacg gttccgatcc cttacttcgc tgcttgagcg gaacagccga
      181 attccgtgag gcgctcaagc tgcttcctgc gaaacagtgt gagttgccta tcctcattgg
      241 cgcgtctggc tttccctacg aagaggccgc gcaaaccatc cagggcggat agcgcagcaa
      301 catccttggt tccgaaatct ccagtgccgg aaacgcaaat caaggcggcg ctgacgcgcc
      361 caacagcaga aatgatcacc ttgtgggatc ataaatgacg gaatttgaaa ccggcagaca
      421 ctttatcgag catgcgtgct caccagtctc cccgaaggcg agaaggtagc ctccgatgaa
      481 gtgttgctgg tcacaaaatg gtcatcgaac ttacgcgcag tatggccgca agcgtgccat
      541 tgttcttaag aaccggcaac agtccgaagt ccgacaggat atcttgatcg ctctgcgagc
      601 ggccatattc attcgacggt gacagccttg gcgagattac gtggttggtc cacgtcggtt
      661 cctttgatca ccgccgtatg atacgctagc aactgcagag ggatggcgta aacgagcggc
      721 gtaacgaagg ccggcatatc gggcaggacc aaggttacgt tgggctcgac cgcgatctcg
      781 cgggcgccct gccgatcggt gagaaggata atccggccgc cgcgtgccgc aacctcctgc
      841 gtgttggatg cgattttttc gaacacatga tcatacggcg caatcacgat gatcggaacg
      901 gtgtcgtcga tgagcgcgat gggtccgtgc ttcagttctc cgcccgcata gccctccgca
      961 tggatataag acagttcctt gagcttgaga gcgccctcga gtgccagcgg gtagctggtg
     1021 ccccgcccga gatagagcac atcccgactc ctgaagaggt gacggaccac tagctcgatt
     1081 tcctgctcca gccccaacgc atcgatcatc agccgcggca cgtcgatcag cgcctgtaca
     1141 agcgatcgct cttgcgctcc cgaaagcacg ccgcgagcca ggccggcagc aattgccaaa
     1201 caagcaagca cggtaagctg acaggtaaag gctttggtcg atgcgacccc gatttccggg
     1261 cccgccaacg tcggcatcac gacatcgctg tcgcgagcaa ttgtcgaagt ctgcacattc
     1321 acgatcgaaa ggatgtgctg ctgctgttcc ttcgcgtagc gcaacgatgc gagcgtgtcg
     1381 gcggtctcgc ccgattgcga cacgaatatg gatacatcgc cgggacgcag tggcgccgcc
     1441 cgataccgga attccgatgc gatatcgatt tccaccggca gacgcgcaaa ttgctcgaac
     1501 cagtacttgg ctacgagacc cgcatagtag gcggtgccgc aggctgaaat cgatatccgg
     1561 gatatatcag caaaattgaa cggcaacttg gttggaagtc tgacgcgctc cgcgcccacg
     1621 tcaaggtagt gcgtgagggt gtggttcacc acctctggct gctcgtagat ttcctttgtc
     1681 atgaaatagc ggtagttgcc cttgtcgacc aggagcgccg acgccacaga cttgatcgtc
     1741 gggcgggttg cgatctggcc tcgggcatcg cggacttcaa tggcgtcacg ccgaaccacg
     1801 acaagatcgc cgtcatcgag atagctgatc gttccggtga gcggagcaag cgcgatcgca
     1861 tcggacgcga gatacatctc gccgtcgcca tggccgaccg ccagcggtga tcccttacgc
     1921 gcgccgatca gtaggttggg ctcgccggcg aacagaaaaa cgagagcaaa ggcgccgcgc
     1981 aatcttggca gcgcggccgc aaccgcatca actggcgaac ggccggcctt gaattcgtcg
     2041 ctgaccaagt gaacaatgac ctcggtatcg gtttcgctcc tgaaggtcac tccgttggct
     2101 tccagccctc ggcgcaagtc gcggaaattc tcaatgatac cgttgtgcac gacggcgacg
     2161 acctctgtcg catgcggatg ggcattgatc tcgctgggcc ggccgtgggt tgcccaacgt
     2221 gtgtgtccaa tgccgatcgc cccgacaagc ggtgtgccca caaggcggtc atgcaagttc
     2281 ttcagcttgc cctcggcgcg caaccgcgca agttggccgt tttcgagtgt tgcaattcca
     2341 gcggaatcat aaccgcggta ttcgaggcgc ttgagcgatt caaccaactg attggcaact
     2401 ggcgcacgtc ccaggattcc gacaatgccg cacatattcc gccttggctc cctcgcaatg
     2461 gtcgtcagca gatcgcgccg aacggtcaga ggtgatcagc ggcgcgagcg gctcaaatgt
     2521 aggttgttcc tacaggtcta cctatgctga gtgcagcatg gaggcaccgt ggactaaact
     2581 ggacaatgga ctggtgtggt cgcgcttcga caaagtacgg cgtgattgct gtggccggaa
     2641 gatataaacg cccctattga gctatggccc gaccagtccc cgtgctgact gatccctttc
     2701 tcgaacactg ccgatagcaa gggcgcaaga ggcgatattt tcctcagcct ttcaatgtcg
     2761 agaatacgaa taagatgtcg acttacgcgt ttgatcaagc cgaggtcgct aaatttcatc
     2821 attgttctgc tcaaagtatc gctatttatc acaagatagt tcgcaatatc agtacgcgac
     2881 atcggaagtg tcacattcaa accgcacgct tgcccgctta tgtcagctaa tgccagtgcc
     2941 agaaggaacg aagcgacacg cggctccgtc tcgagccgac caatcattag ctgatggatg
     3001 ttaacgcgag ccagttggtt ctggtactgc gccgataggg acgcccaata ttcgcaagct
     3061 gccggatcca agtcgatcac gcgatggtcg aaagagacca acgatgcgct gctaatggct
     3121 cgtaacgaga caccaggtgt gcgaagaaca atcgacgccg ttacgatatc tccggcgacc
     3181 aggaaatcca atatctgaag tttgcccttt gccggcatgg catcaattgc cagcaagcca
     3241 tcactcaaga tggccatttt tcccgcaggg ggcagctgaa cgcgttgttg cggacgcagg
     3301 cacacgcgct cgcctcgagc acatatcgca tccatgaggt ggactttgtc cttccggtct
     3361 ggccgcgtac ccgccgtgga ttgcgttact ggcattgact gagaactgtc gactaggttg
     3421 ttctgctgca cgtccatgtg cgccctcaag gcgagccctt tgagctttaa gtgtcgaaag
     3481 gttggcggct ttcgatacct aaacgctcgg aaccagatag ggtaagaccg atgacgtaag
     3541 cccgcgacgc tccgaatcac cagaggcgat gacgtaagcc cgcgggctaa acccgaagag
     3601 accaaagagg ttccaacgca gaattctgat gcgcagcaga gatttcaatt ggacataaca
     3661 gctctcttgg ctttgtagtg cgtaatgcac gcatgcgtac gctaatgcgt gcatgcgata
     3721 ttaagaaaca agaaatgcaa taagaaatag aagtgcaaca agaaatgcgc gctcgatttc
     3781 agtcacttca cgtcagcgcc cagcacctta acgtcacacg tctgtgggcg aatggcaata
     3841 tttgaggagc tgaattgtgc accgcagttc gactcatgaa ccgtgcgtaa cgtttcgata
     3901 ccatgaagtg tgcgcaacgt ctcgatacta gaagaggttg cggtttcgtt cggtccggat
     3961 gtcggtcacg catttggccg aattcaaaga tcggttgagg gacatcacag atggcaacta
     4021 caattgggaa tttgatcacg ctcgatgggc tgttcaccga ttggccggcg gccgactccg
     4081 tcatgaactc aggaaacacc gtcgcaggct accaagtcta cggcgcgctc attgctgatg
     4141 cgacgctcgg caacaactat gtaatcggta tcgacgccac cgcccctacg gatccggtga
     4201 tcgccgcgaa caccttcatc tatcttaaca cggatcaaaa taccgcaacc gggtacagcc
     4261 cattcggggc cataggggcc gaatattacg tgcagttctc gaccggctcg accggtacgc
     4321 ttcagccttt tctttactcg gtcacctcga ctggcgttgc gacccagctc aacggcggcg
     4381 caccgctcaa ctttggcgtt tccgccaacg gcgagagtgt cgaaatcgcg atcccgcaga
     4441 cgctgctgac gccgacagct ggtgcggcgc ccaagtcgat caatttcgcg gcctcgatcg
     4501 ataacggggt agcagctctg cccggcgatt tcagcagcaa tccgcaatac accatcaccg
     4561 atccctctac gctggttccg gtgaaccacg ccatcaagaa ggtcgggatt gtttattctg
     4621 cgacgactgc cgcgctgtat tttggaggcg ggcaggccgg ccaaaccgca tatgccgatc
     4681 tgttcatggc cgcgcagcat caggcggaag cagctggcgt ctcgtacgac atcctgactg
     4741 aagccgacct ttccaatgtc gccaagctcg cacagtacag cgcgctggtc ttcccagaca
     4801 tgcagaacgt ccaaagcagc caggtttctg cgatcgtcgg cgccttgtcc caggtggtct
     4861 acaactacca tgtgccgatc atcacggccg gcgacttctt gaccaatgac cagactggcg
     4921 cggcgctgcc cggcaatccc tatatcaaca tgcagacgct gcttgatctg aggcagaccg
     4981 ggttcggcac agcgacttac tcggtgacgc cggacggcac cgctctggcc aatcataatc
     5041 cggtcatggc gggatacgca gccggcgagc acattggggg cgccagcggc cagttcgccg
     5101 ggacgacggc aggtctttac accaacactg gctacctcac cttctcgggc gtcaccaagc
     5161 ccgcgaccgt gcttgccgac atcaacatcc agggtggggc ttcgctcgcc ggtgtggttc
     5221 agacgactac cgggggcacc aacacgcatt tcgcgactac gggcctcctg ggcgacagca
     5281 atctgctgca gcacgcgatc cagaatgcgg tgttcggtac aacgcccagc ctgtcgctcg
     5341 acattacaag gatggctggc gttgttggtt cgcgtaccga catggatcaa tcgcagttcc
     5401 cgtcggacgt ttcgccgggc cccggtcagc cgggcatcta tgacgaactg attccgatgc
     5461 tccagcagtg gaagcaacaa ttcaattttg tcggctcctt ctttataaac gtcggcgaca
     5521 acgcaaatcc tgccaatgaa aacttgacca actgggcggt gtccaagccg tactatgacg
     5581 cgattctcgc tatgggcagc gagatcggca accattccta cacccatctc attaacccgc
     5641 cggccgtcga cgccaatggc aatccggtgc ccaccaccat tattaacggc caagttgtct
     5701 ccacttggga tgagaacacc aataccctct acgtcacacc gcctgccaat ggctcggctc
     5761 cgaattggac gttcaactac gagttcggcc agtcgaaaac gatcgagcag caaaatctcg
     5821 gcatcacgat cgccggtgcg gccgtgccgg gcgccgccga aacgattggc acgtctgaac
     5881 agatcatgaa gttttatcag accgtggcgg ggggcctcac gggttacgtg agcggcggct
     5941 ggaccggggt cggttccggc taccccaatg ccttcggcta catgagcccg accgatacgg
     6001 gctcagtata tatcgcgccg aacatcacgt tcgacttcac cgaggtcgag ttccagaaga
     6061 agacccctac ccaggcgttg gctgactggg aggctctgtt ccaacagctc tcggcccact
     6121 ctcaggtgcc ggtcatcgtt tggccgtggc atgactatgg accgacgaat tggccgacga
     6181 atggcaccgc agtcggtccg ggttacacca cccagatgtt tacggacttc attgcctttg
     6241 ccttcggtgc gggctacgag ttcgtgacag acgaggacct cgccgcccgc atcgccgcgc
     6301 agcagaaggc gatcctgtcc gagacgacaa ccggtaacgt tataacggcg accgtcacgc
     6361 ctgatcccac tgcgccggac ctcggcgcga tggcgctcaa catgatcaac ggcgccgccg
     6421 gtcaggtcat tcagaacgcc ggaagctggt ttgcctatga caccaacagc atcttcctgc
     6481 cgaaggctgg cggtaagttt gtggtcacac ttggtgcagc gcaggacgac gtcactcaca
     6541 tcgacgcgtt gcccatgcgc gccgacctcc agaccgtcac cggcaacggc acgaacctcg
     6601 ctttctcgat gaccggtgac ggtgtcgtcg acgtacacgt caagacgcct ggtgccaata
     6661 tcgtctcggt ccaaggggct cccgccgcgt cgttgacggg gaccgacctg tcgttgacct
     6721 tcgacgacgg tgctctggcg atctccccga cctcgccgca aggcgtgccc gtccttcaca
     6781 acgtaaccat ttccgagggc cccgccgccg tgttgtcgac cgggacgaac agtctgtttg
     6841 gcggctcggg caccaacgtg ctgacgctta cgggtctcta cgagaactat acgacccaac
     6901 tcaatccaga cggcagcgag acgatcacgg atacgcgcgc cggcaggccc gacggcaccg
     6961 atatcgccca caatttccag gactttcagt tcgcggatgg acttgctctg actgccgcgc
     7021 agatcaccgg gactgggttg ctattgggga cttccggggc cgacacactg accagcgcgc
     7081 tccctggcga ggtcgttctc ggcctggccg gaaacgacac gctgagggca ggcgctgcga
     7141 accaggtgct ggatggcgga acaggcgcca atacgttcaa cgacaacggc ttcggcggcg
     7201 tgaccctgat cggcgacggc ggcaacgaca ccttcgtcgt atcgaacgcc gccaccaaag
     7261 tcctcgaaat gccgaatacc ggtaccgcca cggtcgacac caatctctcc acctatgtgc
     7321 tgccgagcaa cgttgagaac ctggtctaca cgggcatcct cggtatcaac gctaccggca
     7381 atgcgctcaa cgatacgttc agtggtttcg tcggatcgag cacggtcacg ggcggtgcgg
     7441 gagccgacac cttcgcgttc gccccagtca atccggtgtc gatcccgctc ctcggcgtct
     7501 acatcgccgg cttcggcaat gcctcgatca ctgacttcac ggccgacatg accaacgcga
     7561 accacgacgt cctttcgttg tcggcgtcga tgttcgcgcc cggcacgacc gcagccgcgc
     7621 tggtcggcgg caccgcacat aatgccgcgg gcggggccgt caccgtcgcg caggtgggcg
     7681 ccaatgtctc catcgcagtg gatctaacag atgcgatcgt tctgaataac gtgtcgctcg
     7741 cggtactcaa ggccggcgcc gcagccgaca tccacttcgc ctgaccgaca atcacaggaa
     7801 c
//
LOCUS       DATILV010000973         4245 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2285747, whole genome shotgun sequence.
ACCESSION   DATILV010000973 DATILV010000000
VERSION     DATILV010000973.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4245
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2285747"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..441)
                     /locus_tag="VLJ17_23450"
     CDS             complement(<1..441)
                     /locus_tag="VLJ17_23450"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSV25969.1"
                     /translation="MSIPAVAQQWPTKTVRAVVPLSAGSAVDIVPRIVLEQVAAQIGQ
                     SIVVENRTGASGTIGTRSVATSPPDGYTLLVQSSGIVVSPFTVANAHYDPLKDFVAVA
                     PLANLPNVLVVAPSQNIRTVQEFVAHAKKKRITYGSAGVGTPVYL"
     gene            complement(758..1309)
                     /locus_tag="VLJ17_23455"
     CDS             complement(758..1309)
                     /locus_tag="VLJ17_23455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25970.1"
                     /translation="MKDVSRIAAQAKVGAAIVTGALLMSAIASPAAAETVRWRSIAGS
                     SPFFNNAGAAQPNAVDAIAPGGRPWITLGGRAKVNLATSQVTFEVEGLVLLGGNTIGT
                     PGAVNKVVGSVVCDPGLATQQIRDTPAVTLSAQGDAEFSGTTTVPIPSTCNSTNIAFL
                     VRIGPVAGAWIAAGIVKNSPRDD"
     gene            complement(1543..2313)
                     /gene="flgH"
                     /locus_tag="VLJ17_23460"
     CDS             complement(1543..2313)
                     /gene="flgH"
                     /locus_tag="VLJ17_23460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009427 - bacterial-type flagellum basal
                     body, distal rod, L ring [Evidence IEA];
                     GO_function: GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body L-ring protein FlgH"
                     /protein_id="HSV25971.1"
                     /translation="MQRNAAPFRRFLREAKVIPGLVAVATLLDGCTALDRLINIGEQP
                     KLSAIDNPTAKAGYKPVQMPMPTPQPATYNPNSLWRNGSRAFFKDQRAHQVGDLLTVV
                     VNINDTAQFANETQRSRNNKTDSNVTNFFGKNNFPLGNVPVPGTLLNADSTASSDGKG
                     SVNRTEALTTNVAAVVTQILPNGNMVVEGKQEIRVNFEMRELIVAGIVRPEDIQSDNT
                     IDSHKIAEARIAYGGKGQITDIQQERYGQQLSDILLPF"
     gene            complement(2387..3442)
                     /gene="flgA"
                     /locus_tag="VLJ17_23465"
     CDS             complement(2387..3442)
                     /gene="flgA"
                     /locus_tag="VLJ17_23465"
                     /inference="COORDINATES: protein motif:HMM:TIGR03170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009428 - bacterial-type flagellum basal
                     body, distal rod, P ring [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring formation chaperone
                     FlgA"
                     /protein_id="HSV25972.1"
                     /translation="MSMLRIFAATALAVVATGAPADAQISGALPQAGAPAPFADPTLK
                     RSVVVTGDLVRIGDLIDNAGGAFATIPVFRSPDVGTTGTVPARTIVEAARAHNLFGVK
                     TGEVIEVEVTRAGRVIAKDGIEARIARLFAGTNGLGAASDLSISFDRAPASINADLAP
                     DTELKAMRASYDARTGRFDVVFDVPVGTSRRSLLRYTGSLVETADAVVPIRAIGRGEI
                     VRGADLVVERRPRAEVTADVPASIAEVAGRAARQGLRPGRPVRRTDLAKPELVKRDDT
                     VSVIYQVPGMMLTSRAKALEGGGEGDIVNVLNPQSKRAIQGVVIGPGRVDISPPTLQA
                     AVAGTGPSADEMPTGPR"
     gene            complement(3451..4239)
                     /gene="flgG"
                     /locus_tag="VLJ17_23470"
     CDS             complement(3451..4239)
                     /gene="flgG"
                     /locus_tag="VLJ17_23470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009426 - bacterial-type flagellum basal
                     body, distal rod [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgG"
                     /protein_id="HSV25973.1"
                     /translation="MQALQTASTGMAAQDLHVQVISNNIANMATTGYKRQRAEFTDLL
                     YEHVRRIGTASSDQGTILPVGIDIGSGVKTVGTPRIMTQGSLTQTGNAFDLAITGDGF
                     FKIQMPDGTFSYTRDGSFMLDGTGRLVTAQGYLVQPGITVPQNATGFSVNVQGQVSVT
                     PVGSTTPTILGQLTLTRFINQAGLLSIGDNLLQETPASGPPQDGLAATNGAGSIQQAT
                     LEQSNVDSVTEISDLIAAQRAYEMNAKVITAADQMLSAVIALQR"
BASE COUNT          773 a         1260 c         1382 g          830 t
ORIGIN      
        1 gaggtacacc ggcgtgccga cgccggccga accgtaggtg atccgcttct tcttcgcatg
       61 ggcgacgaac tcttgcacgg tgcggatgtt ctgcgacggc gcgaccacca gcacattggg
      121 caggttggca agcggcgcca cggcgacgaa atccttgagg ggatcgtaat gcgcattggc
      181 gactgtgaac ggcgagacca cgatgccgga ggattgaacc agcaacgtgt agccgtccgg
      241 cggcgacgtc gcgaccgagc gggtcccgat ggtgccgctg gcgccggtgc ggttctcgac
      301 cacgatcgac tggccgatct gggccgccac ctgctcaagc acaatgcgcg gcacaatatc
      361 gaccgcgctt cccgcgctga ggggcaccac ggcgcggact gtcttggtcg gccattgctg
      421 cgccacggcg gggatggaca tcagcggcac aagggccgcc aataggaacc acaaacgcct
      481 catcttaacc tcgctcgcgg tcgtgccgcc acgtgtgctt caatacgacg gactcgggtc
      541 aagcaattta gggcctcctc aggagcctct accataggcg aggcgtcgca gggatcggtg
      601 cgcgatcgtg gcgcgttctt gcgttgaacc cgctgaacgc caaccaaatg caaccgcccg
      661 gctgcgcacc gggcggctat ctccgcagtc tcgtctttta cgcagcgagc acgcgtcgac
      721 tacgctttcg gctacgcgat tgatcctgga gcttcgatta gtcatccctc ggagaattct
      781 tgacaatccc tgccgcgatc caggcgcccg ccaccggtcc gatccgaacc agaaatgcta
      841 tatttgtcga attgcaggtc gaagggatcg gcacagttgt ggtgccggaa aattcagcat
      901 cgccctgcgc gctgagggtc accgccggcg tatccctgat ttgctgggtc gcgaggccgg
      961 gatcgcagac gaccgagcca accaccttgt tgactgcgcc tggcgttccg atcgtgttgc
     1021 caccgagcaa aaccagaccc tcgacttcaa aggtcacctg actcgtggcc aaattcacct
     1081 tcgcgcggcc accgagcgtg atccacggcc gtccgcccgg cgcaatagca tccaccgcgt
     1141 ttggttgggc agcgccggca ttgttaaaga acggcgaaga gcccgcaata cttcgccacc
     1201 gcaccgtttc cgccgccgcc ggcgaagcga ttgccgacat gagcagagcg cctgtcacta
     1261 tggcggcgcc gacttttgcc tgagcagcaa ttcgactcac gtctttcatg aagtcctccc
     1321 actgctagac tgaatgacct aaagggattt tgtcatggtg atcccatgac aaagacattt
     1381 tcgacgttga gataggcttt cgtgtggagg gtcgtccaaa tattgcccat gtcaggccgc
     1441 ggtctttcgg taacccgcca cttaatggag atgattaagt catcaaatgg aaataattac
     1501 gtcacgaaat tcgccgggga gttcgtcgtt gggcgacgag cctcagaacg gcagcaggat
     1561 atcggacagt tgctgtccat agcgctcctg ctggatatcg gtgatctggc ctttgccacc
     1621 gtaggcgatg cgtgcttcgg cgatcttgtg ggaatcgatg gtgttgtcgc tttggatgtc
     1681 ctcaggccgc acgatgcctg cgacgatcag ttcgcgcatc tcgaaattga cgcggatttc
     1741 ctgcttaccc tcgaccacca tgttgccgtt gggcagaatt tgcgtcacca ccgcggccac
     1801 gttggtggtc aacgcctcgg tgcggttcac agaacccttg ccgtcggagg acgccgttga
     1861 atccgcattg agaagagtgc ccggaaccgg cacgttgccg agcggaaagt tgttcttgcc
     1921 gaagaaattg gtgacgttgg aatcggtctt gttgttgcga ctgcgttggg tttcgttggc
     1981 gaactgggcg gtgtcgttga tgttgaccac gacggttagg agatcgccta cctgatgggc
     2041 gcgctgatct ttgaagaagg cgcgcgagcc gttgcgccac agcgaattgg gattgtaggt
     2101 ggcgggctgc ggcgtcggca tcggcatctg caccggcttg tagccggcct ttgcggtagg
     2161 attgtcgatc gctgacagct tgggctgctc gccgatatta atcaggcggt cgagcgccgt
     2221 gcatccgtcg agaagggtcg caacggcaac gaggccaggg attactttcg cttccctgag
     2281 gaaccgacga aaaggagccg cattgcgttg catcccctgc cgcgcaagtg gaggagggga
     2341 aagatcgccg ctcggcttga ccgggaaact ggacatgaag acctcgctac cggggaccag
     2401 tgggcatttc gtctgccgag gggccagtcc cagcgacggc cgcttgcagc gtcggcgggg
     2461 aaatgtcgac gcggccgggg ccgatgacaa cgccttggat ggcgcgtttg ctttgcggat
     2521 tgagcacatt gacgatatcg ccttcgccgc caccttctaa tgccttggcg cgagacgtca
     2581 gcatcatgcc gggcacctgg tagatgacgc tgacggtatc gtcgcgcttg accaattcgg
     2641 gtttggccag gtcggtgcgg cgcaccggcc ggcccggacg caagccctga cgggcggcgc
     2701 ggccggccac ttccgcgatc gaagcaggaa cgtcggccgt cacctccgca cgtgggcggc
     2761 gctcgaccac gaggtcggca cccctcacga tttctccgcg cccgattgcg cgaatgggca
     2821 ccaccgcgtc ggcggtctcc accagtgacc cggtgtagcg caacagggag cggcgcgacg
     2881 ttccgaccgg gacatcgaac accacatcga agcggccggt gcgtgcgtca taggaggcac
     2941 gcattgcctt gagctcggta tctggcgcaa ggtcggcgtt gatgctcgcc ggtgcgcgat
     3001 cgaagctgat actaaggtcg gacgcggcac ccagtccgtt ggtgccggcg aacaggcgcg
     3061 cgatgcgcgc ttcgattcca tctttggcta tgacgcgacc ggcgcgggtg acctcgacct
     3121 cgataacttc gccggtttta acaccgaaca ggttatgggc gcgggccgcc tcgacgatcg
     3181 tgcgggccgg caccgtacct gtggtgccga cgtcggggga acggaacacc gggatggtgg
     3241 cgaaggcgcc gccggcgttg tcgatgaggt cgccgatgcg aaccagatcg cccgtcacca
     3301 cgacgctgcg cttgagcgtc gggtccgcga acggcgccgg tgcacccgcc tgcggtaatg
     3361 caccgctgat ctgggcatcc gccggagccc cagtcgccac gacggccagt gcggtggcgg
     3421 cgaatatgcg caacatagac atgttcttcc tcagcgctgc agggcaatta ctgccgacag
     3481 catctggtcg gcagcggtga tcactttggc gttcatttcg taggcacgct gcgctgcgat
     3541 caggtcggag atctcagtga ccgaatcgac gtttgattgc tcgagcgttg cctgttggat
     3601 gctgccggcg ccgttggtgg ccgcgagacc atcctggggt gggcctgaag ccggtgtctc
     3661 ctggagcagg ttgtcgccga tcgagagcag gcccgcctga ttgatgaagc gcgtgagggt
     3721 gagttgaccc agaatggtcg gggtagtgga tcccaccggc gtcaccgaga cttggccctg
     3781 cacattgacc gaaaagccgg tcgcgttctg cggcaccgtg atgccgggct gcaccaagta
     3841 gccttgcgcc gtgaccaggc ggccggtgcc gtcgagcatg aacgaaccgt cgcgggtgta
     3901 ggagaaagtg ccgtccggca tctggatttt gaaaaagccg tcgcccgtga tggcgagatc
     3961 gaaggcgttg ccggtctggg tcagcgaacc ttgggtcatg atccgcggcg tgcctacggt
     4021 cttgacacca gacccaatgt cgatgccgac cggcagaatg gtgccctgat cggatgacgc
     4081 cgtgccgatg cggcgcacat gctcatagag cagatcggta aactcggcac gctgacgttt
     4141 gtagccggtg gtggccatat tggcgatgtt gttggagatc acctggacat ggaggtcctg
     4201 ggccgccatt ccggtggatg cagtctgaag cgcttgcatg gttgg
//
LOCUS       DATILV010000974         9155 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_240979, whole genome shotgun sequence.
ACCESSION   DATILV010000974 DATILV010000000
VERSION     DATILV010000974.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9155)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9155)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9155
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_240979"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(403..612)
                     /locus_tag="VLJ17_23475"
     CDS             complement(403..612)
                     /locus_tag="VLJ17_23475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV25974.1"
                     /translation="MTSDYAFDSRHEFDRLEVPTRPRIRLHRATVDDIAATRQIATQE
                     LPGAVASEEVIARTISHNRNSVLLF"
     gene            741..1748
                     /locus_tag="VLJ17_23480"
     CDS             741..1748
                     /locus_tag="VLJ17_23480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HSV25975.1"
                     /translation="MLMEPKINPVSWDDIRVFIACAQAESFRKAARSLRLSSSTVLRR
                     IERFEKALGAPIFERLPEGVILTGEGRALLQSARKMEHASFDVLRRQTATDVVKRGHV
                     SISITEGLGAYWVMPRLVDFQRSYPFVIINLQCAMQSADVLRLESDMAIQFSVPETPD
                     LIVVKLGRLHVHPFASDQYLDLFGVPRCSDDLKNHRIVQQVAPGLDENAIAGFFGIDS
                     IDNVVAIRTNSSTAHFYAIEKGAGIGVLPTFAVALGAPVIPVDIGHRYHLDIWLTYHP
                     NARKTPRRALTIDWLKKIFDPKIHPWFRDEFIHPSELIRKVPAAAGFNSGAGYFSVTP
                     R"
     gene            1748..2632
                     /locus_tag="VLJ17_23485"
     CDS             1748..2632
                     /locus_tag="VLJ17_23485"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSV25976.1"
                     /translation="MVCGTHLSVQARGSIIDTPVGPTLIRKIGRGPHVYVIHGGPGFD
                     HSYLIEPLMPVAARRTLIFYDQPGCGGTPVNDGRLSALSTFQHFRALVRAVTADRDFG
                     VIAHSWGALVLAGALAPATDATPPIADPIEGLLINPVPIKSESYKFIQRRQASSVSAW
                     VRLKIFLLASDPRNGPRILKLLLPSYTAGEFLLPPSDPFPLNIKTYRAVSRTLNRFDF
                     SLSMPRLKQLAVVQGEDDFTKPSDIAALIDVARYVEVLKGAGHFPFWDSPDAFASALT
                     KAFVPRALVPGESVGQRA"
     gene            complement(2737..3462)
                     /locus_tag="VLJ17_23490"
     CDS             complement(2737..3462)
                     /locus_tag="VLJ17_23490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012336126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV25977.1"
                     /translation="MALLELENVVVAYGNVLALKGLSLTVEEGEIVALLGSNGAGKST
                     TLRVISGLMQAQSGTLRFAGRSISGLSPGAIVKLGVAHVPEGRRVFPGLTVRENIILG
                     GSNRDRAGRTELEADAEKMFGIFPEIKPFQAALGWTLSGGQQQMVAIARGLMSRPKLL
                     LLDEPSLGLAPLIVQQVYRVIADIRRDGTTVLLVEQNAHMALSVADRGYVLETGQLVV
                     HGKPEALWDNEDVRSAYLGGRQT"
     gene            complement(3449..5245)
                     /locus_tag="VLJ17_23495"
     CDS             complement(3449..5245)
                     /locus_tag="VLJ17_23495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     ATP-binding protein/permease"
                     /protein_id="HSV25978.1"
                     /translation="MNASVRSGKTLRSVPGRLGLTLALYVAAALAALAAVLTIPLSAY
                     SLNLLMQASTYAIAVLGLTIVLGYTGQINLAQAAFFGLGAYSVALGTAAFGLSFWGAL
                     AIGIFSAAGAGAVLGLTSLRLGGHYLAMVTISFQTILTLVLTNWVAFTRGPDGVPNIR
                     RPALLAESRPYLGLCVAVLFAVAWFVWRLKTTKLGRAMQAVRDNELAANVVGVDAYAT
                     KVAAFTLSALLGGLGGALFAGGFTYVSPDQFSFAESVVFLTMVLLGGAAAPPGAVLGT
                     ALLILLPEWLRFLKVIYLAVYGGAVILIMVFMPDGIWGYVMTLWRKLRPERPVDPGFV
                     TPLALTQKTAREDGSVILVVRALSKHFGGLKAVDKIDLTIRRNTVHALIGPNGSGKTT
                     LLNVLNGIVRPTGGTIMLEGTDVTRLPTHRRAGRGIGRTFQNVRLFGAMSILDNVMVG
                     AERPHNDVPAGGLERHALAALDFVGIAARAGARVGSLSYGHQRLVEIARALAGSPKLL
                     FLDEPGAGLNHVEKDQLVQLLRRLKGHGLTIFIIDHDMAMVEQVADYITVLNFGKRIA
                     DGTPSEVLRHPDVIAAYLGEKRPALSRSHGTP"
     gene            complement(5242..6117)
                     /locus_tag="VLJ17_23500"
     CDS             complement(5242..6117)
                     /locus_tag="VLJ17_23500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012329745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSV25979.1"
                     /translation="MGFNLQLLFTGIGVGSIYALVALGFALIYRATNVVNFAQGDFAM
                     LGAFAMVVLAIDLELPYWLSIIITLALLVVFGALFNLGVYYPLRNRSFLPVIISTIGA
                     SILLENGVLAAYGPRPQSLDSMFAVPGFSIGEVFFDSQYIVILVVAIVMVALQYVFFE
                     RTLIGKKMQATSQDKEMASLLGIPVMLMIMITFMYSAMLGGLAGILVAPVLFVTVGMG
                     SSIALKAFAASIIGGFGDVTGAIIGGVALGVIETFGAAYVSVPYKDAFAFLVLFGFLL
                     VRPQGIFGERISEKA"
     gene            complement(6291..7397)
                     /locus_tag="VLJ17_23505"
     CDS             complement(6291..7397)
                     /locus_tag="VLJ17_23505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV25980.1"
                     /translation="MLAAALGLATFAAQAADPIKVGMVAPLTGPGAESGRFQTQGAKL
                     AADEINKAGGVLGRQLELVIEDDQTTNPGVVLAFSKLAGNAEFAAFLGPIRSTQIHAM
                     APDALKVGKPVMIGGTDPALTHMGNPWLFRFRPHDVYSARVIADYGAKTLGKRKWAIV
                     HSTDAFGTNGMKNLVESLKGMGIEPVLVQGYPNNSQDFTPVALAVKQSGADVMGTYMT
                     FEPDQGIFAKQLRQLGVTLTWVGSPTTVTTTALKLAGPALYGSYAVVDFNKDSSAAAK
                     AFSAKYEAAYKTAPDIFASWSYDAVHVLGHAIGEAKSLEPEKLRQAILAVKGFAGAEG
                     TYNFDKNGDGLHGYNIVKNNNGTIVFDKHIDFDD"
     gene            7676..8458
                     /locus_tag="VLJ17_23510"
     CDS             7676..8458
                     /locus_tag="VLJ17_23510"
                     /EC_number="1.1.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003858 - 3-hydroxybutyrate dehydrogenase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyrate dehydrogenase"
                     /protein_id="HSV25981.1"
                     /translation="MLKGKNAVVTGSTSGIGLAIARAFAQDGANVTINGFGTPAEIEK
                     ERTGIEKEFGVKAIYSPADMTKAAEIAAMVKTTETTLGSVDILVNNAGIQHVAPIEEF
                     PIEKWDQIIAINLSSAFHATRAAVPGMKARKWGRIISTASAHSLVASPFKVAYVSAKH
                     GIAGFTKTIALEVATFGITVNCISPGYVWTPLVAQQIPDTMKARNMTEEQVKRDVLLA
                     AQPTKQFVTAEQVASLALYLCSDAAEQITGANLTIDGGWTAE"
     gene            8458..>9155
                     /locus_tag="VLJ17_23515"
     CDS             8458..>9155
                     /locus_tag="VLJ17_23515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HSV25982.1"
                     /translation="MANRSDPTPSGAKKKINLALQGGGAHGAFTWGVLDCLLEDGRLI
                     IEGMSGTSAGALNAVMCVDGLARGGQEEARKRLADFWRAVSIDGKLPLVQRQIVERLL
                     TFMPLEGTPVQAWFDAMSRYFSPYDLNPLNINPLRDMIEHFVDFDAIRRYSDVQLYVS
                     ATNVITGRLRIFPREKISADVVMASAALPIVFQAVTIDGAPYWDGGYMGNPVIFPFFR
                     DTTTEDVLIVQINPV"
BASE COUNT         1897 a         2774 c         2650 g         1834 t
ORIGIN      
        1 aacgcgaacc tttcggttcg catttgagtt gcgtcgtgcc aattctgctc ataacgccta
       61 actcctccgg gaccattacg cataccccct ccggaacgca ctagatcaag gctcgcattc
      121 ttgcatagga agatcatgcc actcgtcgac cggcatgatt gtcaaccgat ccaacgagct
      181 tgcgacctac caactaagcc ttaagttccc aaccgttcgt ccccggcgct tgaaaggttg
      241 cgccctattt tccgtgttaa attggaattt tgtccttatt tccttcccca gtgtcccgtc
      301 agaagctctt tgcactgtga gcggccaatt tgggtttaat ccgtcgaatt tgcctccagc
      361 ccaattgtgg tcaatatcag catcgcccag atcccaacaa cgtcagaaca gcaaaacgct
      421 gttgcgattg tgcgagatcg tccgcgcgat cacctcttcg gatgcaaccg caccgggcag
      481 ttcctgcgtt gctatttgcc tcgtggcggc gatatcatca acggttgcgc gatgaagcct
      541 gatccggggg cgggtcggaa cttcgagccg atcgaattca tgccgactat caaaggcata
      601 atcgctggtc atgggcttgc cccaaacttc acggttggat caagaagccg gctgctgttc
      661 gtctgttcgt agtgtgtact ttgaataacg tgcctttggg tgccataaat ttgcaccagg
      721 atggtgcagg aatcgatcac atgctgatgg agcccaagat caatcctgtt tcgtgggatg
      781 atattcgcgt gtttatcgcg tgcgcgcagg ccgaaagctt tcgcaaagcc gcgcgttctc
      841 tcagattgag ctcatcgacg gtcctgcgcc ggatcgagcg gtttgagaaa gctctgggcg
      901 ccccgatttt cgaacgtctc ccggaaggag tgatcctcac gggagaagga cgtgccttgc
      961 ttcagagcgc acgaaagatg gagcacgcat ccttcgatgt gctgcgacgc caaaccgcga
     1021 ccgacgtggt caaacgtggc cacgtttcga tttcgatcac cgaaggtctc ggcgcttatt
     1081 gggtgatgcc gcgcttggtg gatttccagc ggagctatcc gttcgtcatc atcaacttgc
     1141 agtgcgcgat gcaaagcgct gatgtcttgc gcctagaatc cgatatggcc attcagtttt
     1201 ccgtacccga aacccctgat ctcatcgtcg tgaaacttgg ccgacttcac gtgcatccct
     1261 ttgcgtccga ccaatatctt gatctttttg gcgtgccgag gtgctctgac gatttaaaga
     1321 atcaccgcat cgtccagcag gttgcacctg gattggatga aaatgcgatt gccggattct
     1381 tcgggatcga cagcattgat aatgttgttg ccatacgcac gaattctagt acggctcatt
     1441 tctatgccat cgaaaagggc gccggaatcg gcgtgcttcc cacatttgcg gtcgcgctcg
     1501 gcgcccctgt gattccagta gatatcgggc atcgatatca tctcgacatt tggcttacct
     1561 atcatcccaa tgcgcgcaag acgccgcgcc gcgcgctcac catcgattgg ctcaaaaaga
     1621 ttttcgatcc gaaaattcat ccatggtttc gcgacgagtt catccatccg agcgaactaa
     1681 tccggaaagt gcccgccgca gctggcttca attcaggcgc cggatacttt tccgtgacgc
     1741 cgcgttgatg gtttgcggca cgcacctctc tgtccaagca cgggggtcga tcatcgacac
     1801 gccggtagga ccaacactta ttcgcaagat tggacgaggc ccccacgtgt acgtgattca
     1861 cggaggtccg ggcttcgatc attcatatct gatcgaacct ttgatgccgg tggcggcgcg
     1921 gcgcaccctt atattctatg accagcccgg ttgtggcgga acgccggtca acgacggcag
     1981 gctctcggca ttgagcacct ttcagcattt tcgggcgctt gttcgcgctg ttacggctga
     2041 tcgagatttc ggagtcattg cacactcgtg gggcgcgttg gtgctcgccg gcgcattggc
     2101 cccggcaact gatgcaacgc cgccgatcgc cgatccaatc gaaggtctgc tcatcaaccc
     2161 agttcccatc aaatcggaat cctataagtt catacagcga cgacaggcat ccagtgtgtc
     2221 cgcctgggta cgtctcaaga ttttcttgct tgcatcggat ccgcgaaacg gacctcgtat
     2281 tttgaagcta ttgctccctt catatacggc tggcgaattc ctgctgccgc cgagcgaccc
     2341 gtttcctctc aatatcaaaa cttaccgggc ggtcagccgc acgctcaatc ggtttgattt
     2401 ttcgctcagt atgccgaggt tgaagcaatt ggctgttgtt cagggcgagg acgattttac
     2461 caaaccgtca gacatcgccg ctttgatcga cgttgctaga tacgtcgaag ttctgaaagg
     2521 tgccggccat tttcccttct gggattcgcc tgatgccttt gcgagcgcgc tcacgaaggc
     2581 atttgtgccg agggccttgg tcccaggcga aagtgtcgga caacgcgcgt gagttgcgac
     2641 gcattgcgca ttgcggaaat ccgcccttgc gcacgtcccg atgagaatga ggccgactgc
     2701 cgtcacatct aagattcaat aacatctgaa cgcgctctaa gtctgccgcc cgcccagata
     2761 agcgcttctg acatcctcgt tgtcccacag cgcttcgggc ttgccgtgca ccaccaactg
     2821 acctgtctcc aacacgtatc cgcggtcggc gaccgaaagc gccatgtggg cattctgctc
     2881 caccagcagt acggtggtgc cgtcgcggcg aatatccgcg attacccggt aaacctgctg
     2941 tacaatgagc ggagcaaggc cgagcgacgg ttcgtcgagc aacaacaact tcggtcgcga
     3001 catcaatccg cgcgcgatcg ccaccatctg ttgctgtcca cccgagagag tccagcccag
     3061 tgcggcctgg aacggtttga tctcaggaaa aatgccaaac atcttttcag catcggcttc
     3121 gagctcggtg cgcccggccc ggtcgcggtt cgaacccccg agaatgatgt tttcgcgcac
     3181 cgtcagccct ggaaatacac gccggccttc cggtacatgc gcgacgccca gtttcacgat
     3241 cgcgccgggc gagagaccgc tgatggagcg cccggcaaag cgcagcgttc cggattgggc
     3301 ctgcatcagg cccgagatca cccgcaacgt cgtgcttttg ccggctccgt tggagcctag
     3361 cagggcgaca atctcgcctt cctcgaccgt gaggctcagc cccttgaggg ccaggacgtt
     3421 cccgtaggcc acaaccacgt tttcaagctc aaggagtgcc atgggacctc gacaaggctg
     3481 ggcgtttctc gcccagatag gccgcgatga cgtcgggatg gcgtagaact tccgaaggcg
     3541 tgccgtccgc gatgcgtttg ccgaaattga gcacggtgat gtaatcggcg acttgttcca
     3601 ccatcgccat atcgtgatcg atgatgaaga tagtcagccc gtgccctttg aggcgcctga
     3661 gcagctgcac gagttggtcc ttctcaacgt ggttgagacc ggcccccggc tcatcgagaa
     3721 acaaaagctt cgggctgccg gcgagcgcgc gggcgatttc cacgaggcgc tgatgtccat
     3781 aactcaggct gccgacgcgt gcgccggcgc gggccgcaat gccaacgaaa tcgagtgcgg
     3841 ccagcgcgtg acgttcaagc ccgccggccg gaacatcgtt gtgcggccgc tcggccccca
     3901 ccatcacgtt gtcgaggatg ctcatggcgc cgaatagccg gacgttctga aaggtacggc
     3961 cgatgccgcg gccggcacga cgatgggtcg gcaagcgggt cacatccgta ccttcgagca
     4021 tgatggtacc cccggtcggt cgtacgatgc cgttgagcac attgaggagc gtcgtcttgc
     4081 ccgagccgtt aggaccgatc aacgcgtgca cggtgttgcg gcggatcgtt aggtcgatct
     4141 tgtcaaccgc cttgaggcca ccgaagtgct tggacagggc gcgaaccaca agaatgacgg
     4201 agccatcctc gcgggcggtt ttctgcgtca gcgcaagcgg ggtgacgaag cccggatcga
     4261 caggacgttc agggcgcagc tttcgccaca gcgtcatcac gtagccccag atgccgtccg
     4321 gcatgaaaac catgatcagg atcacggcgc cgccatagac cgcgagatag atgaccttga
     4381 gaaaacggag ccactcgggc aggagaatca agagcgcagt gcccaacacg gcaccgggcg
     4441 gcgcggcggc gccgccgagc agcaccatgg tgaggaacac gaccgactca gcaaagctga
     4501 attggtccgg gctcacatac gtaaagccac ccgcaaacaa tgcgccgccg agaccgccga
     4561 gcaaggctga aagcgtgaag gccgcgacct tggtggcgta ggcatcgacg ccgacgacat
     4621 ttgcggcgag ctcattgtcg cgtacagcct gcatggcgcg cccgagcttc gtggtcttca
     4681 gacgccagac gaaccatgct accgcaaaca acaccgcgac gcagaggccg agatacggcc
     4741 tgctctcggc gagcagcgcc ggccgcctga tgttcggtac gccgtcaggc ccgcgcgtaa
     4801 aggcgaccca gttggtcagc accagagtaa ggatggtctg gaagctgatc gtcaccatcg
     4861 cgaggtagtg gccgccaagg cgcagcgagg tcaggcctaa cacggcgccg gcgccggccg
     4921 ccgagaagat cccgatcgca agagcgcccc agaacgacag tccgaaggcc gcggtgccga
     4981 gggcgacact ataggcgccg agcccgaaaa aggccgcctg tgccaagttg atctgtccgg
     5041 tgtagccgag cacgatggtc aatcccagca ccgcaatggc gtaggtggag gcctgcatca
     5101 gcagattgag cgaataggcg gacagcggga tggtgagcac tgctgcaagc gccgcgagcg
     5161 ccgccgccac ataaagcgcc aaggtgagcc ccaaccgccc cggtacactg cgcagcgttt
     5221 ttcccgaccg cacggaagcg ttcatgcctt ctccgagatg cgctcgccga aaatgccctg
     5281 cgggcgcacc agcaggaagc cgaacagcac taagaacgcg aacgcgtcct tgtagggcac
     5341 ggagacgtaa gcggctccga atgtctcgat cacgccgagc gcgaccccgc cgatgatggc
     5401 gccagtgacg tcgccgaagc ccccgatgat gctcgcggcg aaagccttga gtgcgatgga
     5461 ggagcccatc ccgacggtga cgaacagcac cggtgccacc agtatgccgg ccagcccacc
     5521 cagcatggcg ctgtacatga aggtgatcat gatcatcagc atcaccggaa tgccgagcag
     5581 gctcgccatc tccttatcct gtgaggttgc ttgcatcttc ttgccgatca gggtccgctc
     5641 gaagaacaca tattgcagcg ccaccattac gatagcgaca accaggatca cgatgtattg
     5701 gctatcgaag aacacctcgc cgatactaaa gcccggcacc gcaaacatgc tgtcgagact
     5761 ctgcggccgc ggtccgtaag ctgcgagcac tccgttctcc agcaggatcg aggccccgat
     5821 ggtgctgatg atcaccggca ggaagctgcg gttgcgtaac gggtagtaga cgccgaggtt
     5881 aaacagcgcc ccaaagacga ccaatagcgc aagggtgatg atgatgctca accaataggg
     5941 aagctcgagg tcgatggcca gtaccaccat ggcgaaggca cccagcatgg cgaaatcgcc
     6001 ctgagcgaaa ttgaccacgt tggtggcccg atagatcagg gcaaatccga gcgccaccag
     6061 cgcatagatg ctgccaaccc cgattccggt gaagaggagc tgaagattaa agcccataaa
     6121 tggcgtggtc cgctttcact cttctggttg gggcgatcaa aatcagttct ccagcgtcat
     6181 gcccgcgcag agacaccccc tcgcgctgcg gcgatcttcg cgggcatcca cgtctttctc
     6241 gccgcgccgc gaacgtggat ggccgggaca agcccggccg tgatagtcgc tcaatcgtca
     6301 aaatcgatgt gtttgtcgaa cacgatagtg ccgttgttgt tcttgacgat gttgtaaccg
     6361 tggagcccgt cgccgttctt gtcgaaattg taggtcccct cggcacccgc aaagcccttc
     6421 acggcgagaa tcgcctggcg cagcttttcg ggctccaggc ttttcgcctc gccgatcgcg
     6481 tgcccaagca catgcacggc atcgtagctc cacgacgcaa aaatgtccgg tgccgtttta
     6541 taggctgcct cgtacttcgc agagaacgcc ttggcggctg cgctcgaatc cttgttgaag
     6601 tccaccaccg cataggaacc atagagcgcc ggtccggcga gcttcagcgc cgtggtcgtc
     6661 accgttgtgg gcgatccaac ccaggtgagc gtgacgccca actggcgcag ttgcttggca
     6721 aagatgccct ggtcgggctc gaacgtcatg taggtgccca tcacatcggc gcccgattgc
     6781 ttgaccgcga gcgccaccgg cgtgaagtcc tgagagttat tcgggtagcc ctgaaccaga
     6841 actggctcga tgcccatgcc cttcagcgac tcgacgaggt tcttcatgcc gttggtgccg
     6901 aacgcgtcgg tcgaatgcac gatcgcccat tttctcttgc caagcgtctt ggcgccgtag
     6961 tcggcgatga cacgtgccga ataaacatcg tgcgggcgga atcggaaaag ccacggattg
     7021 cccatgtggg tgagcgccgg gtcggtgccg ccgatcatga ctggctttcc gaccttaagc
     7081 gcgtcgggcg ccatggcatg aatttgggtc gatcttatcg gcccaagaaa cgccgcgaac
     7141 tccgcattgc cggcgagctt gctgaacgcc agcacgacgc ccggattggt ggtctgatca
     7201 tcttcgatga cgagttccag ttgtcggccg aggacgccgc ccgctttgtt gatctcgtcg
     7261 gccgcaagct tggcgccctg agtttggaag cgcccggact cggcacccgg gccggtaagc
     7321 ggcgccacca tgccgacctt aatgggatcg gccgcctggg cggcgaacgt cgccaatccc
     7381 aacgccgcag cgagcatcca caaggcggcc tggatcgtcg ccaaaccctt ggcattccct
     7441 cgataaccca tggcatcccc cgggttgttg atttccgatg gcatccaaca aggatgcatc
     7501 tgccggactc tgatggcaag ttgctaaagg gtatgaaaat gcacattttt cctgttttcc
     7561 ggccgtagcg gatacccaac tgtccttgaa taaatcggca atcgtacgta gatgttgcgc
     7621 tgcaatatct gcggccttaa gaccgttcgt gatatcaaac cagataggac ggatcatgct
     7681 gaaagggaaa aatgcggtcg tcaccggatc gacctccggc atcggcctcg ccattgcccg
     7741 cgccttcgcg caggacggtg ctaatgtcac gatcaacggc ttcggcacgc cggccgagat
     7801 cgaaaaggaa cgcacaggga tcgaaaagga attcggcgtc aaggcgatct attcgcccgc
     7861 cgacatgacc aaagcggccg agatcgccgc gatggtcaag accacggaga caacgctcgg
     7921 gtcggtcgac attctggtca acaatgccgg tattcagcat gtagcgccga tcgaggaatt
     7981 ccctatcgag aaatgggatc agatcatcgc catcaatctg tcctcggcgt tccatgcgac
     8041 ccgtgccgcg gtgccgggca tgaaggcccg caaatgggga cgtatcatct cgaccgcttc
     8101 ggcgcattcg ctggtggcgt cccccttcaa ggtcgcctac gtatccgcaa agcacggaat
     8161 tgcgggcttc accaagacca tcgcgcttga ggttgcgacc ttcggaatca cggtcaactg
     8221 catcagccct ggctatgtgt ggacgccgct cgttgcccag cagatcccgg acacgatgaa
     8281 agcccgcaac atgaccgagg agcaggtcaa gcgcgatgtg ctgttggcgg cacagccgac
     8341 aaagcaattc gtgaccgccg aacaggtcgc ctcgctggcg ctctacctgt gctcggatgc
     8401 agcggaacag atcactggag cgaacctaac gatcgacggc ggctggacgg cggagtaatg
     8461 gcaaacaggt ccgaccccac gccgtctggc gccaagaaga aaatcaacct cgctctgcaa
     8521 ggcggcggcg cgcacggggc gttcacctgg ggcgtgctcg actgtctgct ggaagacggc
     8581 cggttaatca tcgaggggat gtctggaact tcagcgggag cgctcaatgc cgtgatgtgt
     8641 gtcgacggcc tggcgcgcgg cgggcaggag gaggcaagaa agcggctggc tgatttctgg
     8701 cgggcagtca gcatcgacgg caaattgccg ctggtgcaac gccagatcgt ggaacgcctg
     8761 ctcactttca tgccgctgga gggcacaccg gtccaggctt ggttcgacgc catgtcgcgc
     8821 tacttctctc cttatgacct caatcccctc aacatcaacc cgctgcggga tatgatcgag
     8881 catttcgtcg atttcgatgc gatccgccgc tacagcgacg tgcaactata cgtctccgcc
     8941 accaatgtga tcaccggccg gctgcgtatc ttcccgcgcg aaaaaatctc cgccgatgtg
     9001 gtgatggcat cggctgccct gccgatcgtg ttccaggccg tcacgatcga tggcgcgccc
     9061 tattgggatg gtggctacat gggcaacccg gtaatttttc cattctttcg tgataccacg
     9121 actgaagacg tgctgatcgt ccagattaac ccggt
//
LOCUS       DATILV010000975         9995 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2800209, whole genome shotgun sequence.
ACCESSION   DATILV010000975 DATILV010000000
VERSION     DATILV010000975.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9995)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9995)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9995
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2800209"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..334
                     /locus_tag="VLJ17_23520"
     CDS             <1..334
                     /locus_tag="VLJ17_23520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HSV25983.1"
                     /translation="RGKGLMIGIEFGPPTSLKLKASWNLLETAAKGLFCQLVTIPLFK
                     DHKVLTQVAGHASHTIKLLPPLIISDEDCDLIEHAFDDVIAATHRVPGAIWSLGKTLV
                     GNAVQARG"
     gene            complement(367..1344)
                     /locus_tag="VLJ17_23525"
     CDS             complement(367..1344)
                     /locus_tag="VLJ17_23525"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S1C family serine protease"
                     /protein_id="HSV25984.1"
                     /translation="MPSLSDWNVPPDQRPKAADYDFDLEAAMSAVVGLRAMIPEDAFT
                     AQMLGTERAGNGVLIRDSGLVLTIGYLITEAETIWLSPGVGPPVPGHALAYDQETGFG
                     LVQALARLDLPVLPIGSSGNAQIGERVVVAGAGGRQRSVAARIVAKQEFAGYWEYVLD
                     EAFFTAPAHPNWGGTAMIGAAGELLGIGSLQLEQGRERGGADHLNMIVPIDLLKPILD
                     DLLRHGRPNRPPRPWLGLYAAEIDDRIVVIGLADRGPAQRAGLRTGDVVQTVGGEDVR
                     SLAGMFRQVWSLGRAGVEIPIRLDRDGHTQEHKIASADRSRFFKAPRLH"
     gene            complement(1435..1941)
                     /locus_tag="VLJ17_23530"
     CDS             complement(1435..1941)
                     /locus_tag="VLJ17_23530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HSV25985.1"
                     /translation="MDGLMIDLAEIILRLGGATLIGAAIGLNRDLRDQPIGVRTLGLV
                     GLASAMAALAVVSHGGAGVNSTDAVSRVVQGVLTGIGFLGAGVIVRRNIGDRVHGLTS
                     AACTWTTACLGLVCGLAAWPIVATGVVLVFVLLVFGGPFERMFHRWLSRHADTPAKQQ
                     TTGMPKPE"
     gene            complement(2173..3363)
                     /locus_tag="VLJ17_23535"
     CDS             complement(2173..3363)
                     /locus_tag="VLJ17_23535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007772802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HSV25986.1"
                     /translation="MTHHILIAGGGIGGMAAALALLNRGHDVDVYEQAPELKELGAGV
                     QISPNGSRALHALGVLETLRRLSCDTEGKEVRLWNTGRTWKLFDLGAEAIERYGFPYV
                     TVFRPDLLQVLVDAVRARKTDAIHLGRRAIGVRQRDGRVTLELEDGETIEGDGLIGAD
                     GVHSVIRRKLFGGDNPRFFGMIAWRGVIPMERVPPHISRDKATNWVGVGGHVVHYPLR
                     AGKLMNFVGIQERSDWQVESWTTQGTAQECANDHVGWHPDVQALIAASPSLFKWALMG
                     RDPLPQWTTGNVALLGDACHPTLPMLAQGAVMAIEDAVILGRCIDKYGDITTALSRYQ
                     DARIAVTTRKVAGANDNAARFHNPALGTEEGATAYVDREWSRDAVIRRYEWVFTYNVD
                     TVDI"
     gene            complement(3520..4134)
                     /gene="pth"
                     /locus_tag="VLJ17_23540"
     CDS             complement(3520..4134)
                     /gene="pth"
                     /locus_tag="VLJ17_23540"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013504224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HSV25987.1"
                     /translation="MRLLVGLGNPGPRYAGNRHNVGFMAVEAIARRHRIGPWRRRFKG
                     VTAEGPIDGERVILLLPGTFMNDSGLAVAEAAHFYKIDVGDIVVFHDEIDLPPAKVRV
                     KAGGGIAGHNGLRSISSHVGNDYRRVRIGVGHPGDKDLVYPYVLGDFAKAERPWVEAL
                     CDIIADNAAMMLKEEDSSFQNKVHLAMQAKGFGDVPGPGEPKPE"
     gene            complement(4147..4866)
                     /locus_tag="VLJ17_23545"
     CDS             complement(4147..4866)
                     /locus_tag="VLJ17_23545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007596810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HSV25988.1"
                     /translation="MATVKELKATARPRAGKGAARAVRRAGRVPGVIYGNHQPPLNIS
                     LDYDELRQRIYAGKFLTSLYDVDVDGTKHRVIPRDFQVDPVRELPIHVDFMRLGEGAT
                     IRVRVPIRVINADQSPGIKRGGTVNIVTHTLDVRCPADAIPEAFEVDVAGLEINHSRH
                     LSDIKLPQNVRPFMRDDATLVTIVPPSGYAEEMKAAAEAAAAAAAAAATAAVAPAAAP
                     GAPGAAPAAPAAPAAGAGDKK"
     gene            complement(5148..6695)
                     /locus_tag="VLJ17_23550"
     CDS             complement(5148..6695)
                     /locus_tag="VLJ17_23550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010910731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HSV25989.1"
                     /translation="MERLRTLALAASIAVIGLGHGAFADDDDGRGRTYRHVLLISVDG
                     MHALDLANYISAHPQSHFARLAAHGVIYPKALASAPSDSFPGLLAQVTGGTPKSTGVF
                     YDNSYDRNLFAPGSGCQGQPGTNTLYDESIDNDPLSFTAGGTLGQPLTQINVAKLPLA
                     LVDGKCVPVFPHQFVKVNTIFEVVRAHGGQTAWSDKHPAYDILNGPSGKGVQDLFTPE
                     VNSNDAITGQDTTTGFHSIQRNDQRKVVSVLNEIAGFDSTGIKKVGVPIIFGMNFQAV
                     SVGQKLAKGNKADSLDSGLIGGYADAVGKVPNNGLQLGLDFVDTQIGAMVTALQLAKL
                     DSDTLVIISAKHGQSPINLALRQAFDDGPYGNTPGIDQFTTDDVGLVWLKPSQQKAQY
                     ALAKAYLKAHAAQLGIVELMDRDELAELYRDPFNDNRTPDFVAITIHGLIYTGGTKLA
                     EHGGFAQDDRNVALLVANPKLRPRIINDDVETRQIAPTILRALAIDPRELKSVREEKT
                     EVLPGFE"
     gene            complement(6939..7202)
                     /locus_tag="VLJ17_23555"
     CDS             complement(6939..7202)
                     /locus_tag="VLJ17_23555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HSV25990.1"
                     /translation="MVQTTGRLYDEFARLMNDAAGVAQGVRREFDSIMRTQAERILRD
                     LDVVHREEFEVLKDMVQLALEANETLVERIAALEAKLNAQSRR"
     gene            7461..8282
                     /gene="lgt"
                     /locus_tag="VLJ17_23560"
     CDS             7461..8282
                     /gene="lgt"
                     /locus_tag="VLJ17_23560"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HSV25991.1"
                     /translation="MPILTIPFPDLDPVLVSIGPLAIRWYALGYIFGILLGWAYARAM
                     IRNERNWGGPAPLTVADIDDFILWVTLGIILGGRTGYVLFYNLPHFIEHPSEIFQVWN
                     GGMSFHGGFLGCVVAVIWFATMRGLPVLSLGDITCAAAPIGIMLVRLANFINGELWGR
                     FTDVPWAMIFPRGGPIPRHPSQLYEAGLEGLAVLIVLALLVRAGALRRPGLILGAFAA
                     LYAVMRTFCEFFREPDPQLGFLWGGMTMGMLLCIPLFIAGALLVSFALRRQPAHS"
     gene            8282..9385
                     /locus_tag="VLJ17_23565"
     CDS             8282..9385
                     /locus_tag="VLJ17_23565"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HSV25992.1"
                     /translation="MSEHSSPLEAEIRRRIALNGPIPLAEFMGLCLYDPQHGYYHHRI
                     PLGAAGDFITAPEISQMFGELVGLWAADVWRSMGAPDQVALIEFGPGHGTMMMDSLRA
                     ARAVPEFRKAVRVHLIETSAALQRRQRQTLIGVDDVTLQWHAAIEEVPVLPSIIVANE
                     FFDALPIRQAERRSTGWHERAVAIDADGELALSVASDPLSDLVPALPPTVAQAPLGAI
                     FEWRSDDFAVKIARRVATEGAALIIDYGHLKTATGDTFQAVRLHRHASPLAWPGVTDL
                     TAHVDFEALGKAAQALGARVHGPIEQGTWLKRLGIEARAAVLQANAAEHKRPGITAAL
                     QRLTGTGPGQMGSLFKVIGFSAPRIAQLPGFVT"
     gene            9409..>9995
                     /locus_tag="VLJ17_23570"
     CDS             9409..>9995
                     /locus_tag="VLJ17_23570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphenol oxidase family protein"
                     /protein_id="HSV25993.1"
                     /translation="MARLAGIRHAFFTRAGGVSSGVYATLNAGVGSNDAPRNVAENRA
                     RMAGAMGVPPDHFLTCYQIHSPAAVVAVEPWGAEARPRADAVVTATTGLAIGISTADC
                     GPVLFADAQARVIGAAHAGWRGALAGVTDQTIAAMERLGAERKRIVAALGPMIRQPNY
                     ETGTDLRDQFVAADSTNARFFRPAPREQHFMFDLAG"
BASE COUNT         1826 a         3203 c         3063 g         1903 t
ORIGIN      
        1 tcgcggcaaa ggcctgatga tcggaatcga gtttggcccg ccgacctcat tgaagcttaa
       61 agccagctgg aaccttttgg aaaccgcggc caaaggactg ttctgccaac tggtcaccat
      121 cccgctgttc aaggaccata aggttttgac ccaggtcgcg gggcacgcta gccacaccat
      181 aaagctgcta ccgccgctca tcatctcaga cgaggattgc gatctgatcg agcatgcctt
      241 cgacgacgtc atcgccgcca cccatcgggt tccgggtgcg atctggtcgc tcggcaagac
      301 gctcgttggt aacgccgtac aggcgcgagg gtgacagata tcagagctgt tcttggacat
      361 ctctgatcaa tgcagccggg gcgccttgaa aaatctgctg cgatccgctg aggcgatctt
      421 gtgctcttgg gtatgcccgt cgcggtccag ccggatcgga atttcaactc cggcccggcc
      481 gagcgaccag acctgccgaa acatgccggc cagactgcgg acgtcctcgc ccccgacagt
      541 ctgcaccaca tcgccggtgc gcaatccggc ccgttgtgcc ggaccgcggt ccgcaagccc
      601 aataaccacg atccgatcgt cgatctcggc cgcatagaga ccgagccaag ggcgcggcgg
      661 ccggttgggc cggccgtggc gcaaaaggtc atcaagaatc ggcttgagga gatcgatcgg
      721 tacgatcatg ttgagatggt cggccccccc tctttcgcgg ccctgctcga gctgcagcga
      781 gccgataccg agcagttccc cggctgctcc aatcatcgcg gtgccccccc aattgggatg
      841 cgccggcgcc gtgaagaacg cctcgtccag tacatattcc caatagccgg cgaactcctg
      901 cttggcgacg atgcgcgccg cgaccgagcg ttggcgtcca ccggcgccag ccacgacgac
      961 gcgctcgccg atctgcgcgt taccggaact gccgatcggc agcaccggca ggtcgagccg
     1021 cgccagtgcc tgcaccagcc cgaagccagt ttcctggtca tacgcaagag catgtcccgg
     1081 caccggtggg ccgacgccgg gacttagcca gatcgtttcc gcttccgtga tgagatatcc
     1141 gatcgtgagc acgagcccgc tgtcgcggat caatacgcca ttgcccgcgc gctcggtgcc
     1201 aagcatctgc gccgtaaagg cgtcttctgg aatcatcgca cgcaagccca ccacagcgct
     1261 catggcggcc tcgaggtcga aatcataatc cgcagccttg ggccgctggt ccggcggaac
     1321 attccaatcg ctcaaggatg gcatgctcga aatcctttcc tgccgccatg gcccatcttg
     1381 ccaagaatga gaggtgcgcg cgaccgtttc aagcgcgcct ggtcacgatt tggttcattc
     1441 gggcttgggc atcccggtcg tctgctgttt cgcgggcgtg tcggcatgcc ggctgagcca
     1501 gcggtggaac atgcgctcga atggcccccc gaataccaac aatacgaaca ccagcaccac
     1561 gccggtggcc acgatcggcc atgccgcaag gccgcatacc aatccaaggc atgcggtcgt
     1621 ccacgtgcag gccgcgctgg tcaatccatg gacgcggtcg ccgatgttgc gccgcacgat
     1681 tacgcccgcg ccaagaaagc cgatgcccgt caatacgccc tgaacgaccc gactcaccgc
     1741 gtcggtggaa ttgacgccag cgccgccatg cgacaccacc gccagagccg ccatggcgct
     1801 ggcaaggccc accagcccga gggtgcgcac accgatcggc tggtcacgaa gatcgcgatt
     1861 gagcccgatg gctgccccga tcaacgtggc gccgccgagg cgcaaaatga tttcagcgag
     1921 atcgatcatc aatccgtcca tgatctttta tcaaatgctc gattctagga gcaagttccg
     1981 atgagatcga atcaactctc ccgcgtcatg cccgcgcaga ggcaccccgc cgcgtccccg
     2041 tcttcgcagg cgttccatgt ctttcttgcc gagctttgca agcatgacgt cgatggccgg
     2101 ggttccggag aaaatgggtt caagatgacc gggatccgaa aaatccgggt tgctgattac
     2161 tcaaccctgc ccctagatat caaccgtatc gacgttgtag gtaaagaccc attcgtagcg
     2221 gcgaatgaca gcgtcgcggc tccactcgcg atccacatag gcggtcgcac cttcctcggt
     2281 gccaagcgcc ggattgtgaa accgcgcggc attgtcgttg gcgcccgcga ccttgcgggt
     2341 ggtgacggca atgcgggcgt cctggtagcg cgacagcgcg gttgtgatgt cgccatattt
     2401 gtcgatgcag cggccgagaa tcacggcgtc ttcaatcgcc attacggcgc cctgggcaag
     2461 catcggcagc gtcggatgac aggcatcgcc gagcaaggcc acgttgccgg tcgtccattg
     2521 cggcagcgga tcacgcccca tcaaggccca tttaaatagg ctcggagagg ctgcaatcag
     2581 cgcctgaacg tcggggtgcc atcctacgtg gtcattggcg cactcctgcg cggtaccttg
     2641 cgtggtccac gactcgacct gccagtcgct gcgctcctgg atgccgacga aattcatcag
     2701 tttgccggcg cgcaacggat agtggaccac gtggcccccg accccgaccc agttggttgc
     2761 cttgtcgcgg ctaatatgcg ggggcacccg ctccatcggg atcacgccac gccacgcgat
     2821 catgccgaag aatcgcgggt tgtcgccgcc gaacagctta cggcgaatga ccgaatgcac
     2881 gccgtcggcg ccaatcagcc cgtcgccctc gatggtctcg ccatcttcga gctcaagtgt
     2941 cacccggccg tcgcgttgcc tcaccccgat ggcgcgccgc ccgagatgga tcgcgtcggt
     3001 cttgcgggcg cgcaccgcat cgaccaacac ttgcagaagg tcggggcgaa acaccgtgac
     3061 gtagggaaag ccgtagcgct cgatcgcttc ggcgccgagg tcaaacaatt tccaggtccg
     3121 gccggtgttc cacaggcgga cctccttgcc ttcggtatcg caagaaagcc gccgcaacgt
     3181 ctccaacacg ccaagcgcgt gcagggcgcg actgccgttt gggctgatct ggacgccggc
     3241 gcctaattcc ttgagttcag gggcctgttc gtaaacgtcg acgtcatggc cgcgattgag
     3301 gagcgccaac gccgccgcca tgccgccgat gccgcctccg gcgatgagta tatgatgggt
     3361 cacaaacgaa cactctcgcg atttcaatgc gggacatgcg gcgtttcggg atttcgaagc
     3421 atatcagacg accgcgacat tgagctccag gttcccaaag agcagggatt aacagggatt
     3481 tcgcaaaatt cggcctgctc cgcaaaacct aaagtcccat cactccggct tcggctcacc
     3541 cggccccggc acatcgccaa atcccttcgc ctgcatcgcg agatgcactt tgttctggaa
     3601 gctcgagtct tcctccttga gcatcatcgc ggcgttgtcg gcgatgatgt cgcacaaggc
     3661 ttcgacccag ggccgctccg ccttggcgaa atcgccgagc acataaggat acaccaagtc
     3721 cttgtcgccc ggatggccaa cgccgatgcg cacccgccgg tagtcatttc ccacatggga
     3781 cgagatcgag cgcaggccgt tgtggcccgc gatgccgccg cccgccttga ccctgacctt
     3841 agcgggcggc aggtcgatct cgtcgtggaa caccacgatg tcaccgacgt cgatcttgta
     3901 aaaatgcgcg gcctcagcga ccgccagccc ggaatcgttc atgaaggttc cgggcagcag
     3961 caggatgacg cgctcgccgt cgatcggacc ttccgccgtc acccctttaa agcggcgccg
     4021 ccacgggccg atgcgatgac ggcgggcgat cgcttcgacc gccatgaaac cgacattgtg
     4081 acggttgcct gcatatcgtg ggcccggatt gccgagccca accaagagcc gcatggcgcg
     4141 cccggcttac ttcttgtcgc cagctcccgc tgcaggtgcg gcaggcgcag ccggagcagc
     4201 ccccggggcg cctggggcag ccgcaggagc aaccgcggcg gtggccgcgg cggccgcagc
     4261 agcggcggca gcttcggcgg cggctttcat ctcttccgca taaccggacg gcgggacgat
     4321 ggtcaccagc gtggcgtcgt cacgcatgaa gggacgcaca ttctgaggca gcttgatatc
     4381 gctgagatgt cgagaatgat tgatctcaag cccggcaacg tcgacctcga acgcctccgg
     4441 tatggcgtcg gccgggcagc gcacatcgag cgtatgggtc acgatattga ctgtgccgcc
     4501 acgcttgatg ccgggtgatt ggtcggcgtt gatcacccga atcggaaccc gaacccggat
     4561 ggtggcaccc tcgcccaacc gcatgaaatc cacatggatc ggcagttcgc ggaccgggtc
     4621 gacctgaaaa tcgcggggga tgacgcgatg tttggtgccg tctacgtcaa catcgtaaag
     4681 actggtcagg aacttgccgg catagatgcg ctggcgcagc tcgtcatagt cgagtgaaat
     4741 attgagcggg ggctgatgat tgccgtagat aacgccgggc actcggcccg cgcgacgtac
     4801 ggcccgggcg gcccccttgc cggcccgcgg acgtgccgtc gccttgagtt ccttgacggt
     4861 cgccattgtg atgttcctcg atctgcctaa ggcagcgagc atccgcgtga ggcggcgctc
     4921 gtctccctat gcgttaagct cttcggccac ccaggcggcc gatccccgcg gccaacctcc
     4981 aggggtgttc tggggccgtg gtggcggggc ttatagcctc ggggccgaca aatgacaagg
     5041 aaccgacaga aatagacccg agaacctacg gcggctcaat cttcgcgccg tgagaggtaa
     5101 gcaaattggc ccggcgtacc aacgccgggc cgcgcaatcg aaggcgatca ctcgaagccg
     5161 ggcagcacct cggttttctc ttcacgaacg cttttcagct cacgcggatc aatcgcgagc
     5221 gcgcgcaaaa tcgtcggagc gatctgccgt gtttccacgt catcattaat gatgcggggc
     5281 cgaagcttcg gattggcgac caggagcgct acattgcgat catcctgggc gaagccgcca
     5341 tgctcggcca acttggtgcc gccggtatag atcagtccgt gaatcgtgat ggcgacgaag
     5401 tccggggtac ggttgtcgtt gaacggatca cgatagagtt ccgcaagttc atcccggtcc
     5461 atgagttcga caatgccgag ctgcgccgcg tgagctttga ggtaggcctt ggcgagcgca
     5521 tactgggcct tctgctgcga aggcttgagc cacacgagcc cgacatcgtc ggtggtgaat
     5581 tgatcgatcc cgggcgtatt tccgtaggga ccgtcatcga acgcctgccg caaggccagg
     5641 ttgatcggtg attggccgtg cttggcggaa atgatgacga gcgtgtcgct gtcaagcttc
     5701 gccagctgca gtgccgtcac cattgcgccg atctgcgtat cgacgaagtc gagcccgagc
     5761 tgaagtccgt tgttcggcac cttgccaacc gcgtcggcgt aaccgccaat gaggccgcta
     5821 tcgagggaat cggccttgtt gcctttggcc agcttctgac cgacgctgac ggcctggaag
     5881 ttcattccaa atatgatggg gacgccgact ttcttgatgc cggtgctgtc gaagccggcg
     5941 atctcgttga ggacggagac gactttccgc tggtcgttgc gttgaatgct gtggaatccc
     6001 gtcgtcgtgt cctgtcccgt aatggcgtcg ttggagttga cctccggggt aaataggtcc
     6061 tggacgccct taccggacgg accgttgagg atgtcataag cgggatgctt gtccgaccac
     6121 gcggtctggc cgccatgggc gcggaccact tcgaagatgg tattgacctt gacgaattgg
     6181 tgcggaaaga cgggcacgca tttgccgtcg accagcgcta gcggcagctt cgcgacattg
     6241 atctgagtca gcggctgtcc gagggtgcct ccggccgtaa aactcagcgg atcattgtcg
     6301 atgctttcat cgtacaacgt gttggtgccg ggctgcccct ggcatccgga gcccggtgca
     6361 aacaggttgc gatcatagga attgtcgtag aacacgccgg tcgacttcgg cgtcccgccg
     6421 gtcacctgag caagaaggcc cggaaaggag tccgacgggg cggaggcgag tgccttcgga
     6481 tagatgacac cgtgagccgc cagccgggcg aaatggctct gcggatgggc gctgatatag
     6541 ttggcaaggt ccagcgcgtg catgccatct acgctgatca gcagcacatg gcgataagtc
     6601 cggccgcgtc catcatcgtc atcagcgaaa gcgccgtgcc caagtccaat caccgcaata
     6661 cttgccgcga gcgcaagagt tctcaatctt tccattgaat agacctccgg ttccaaaatg
     6721 aatttcacgc atccggagga ttgtactgac gatgtgaagt cgcaatgtat gaattgtgac
     6781 aggcgtgcga ctgcggcacc gatcacagcg aatgtgtcag aacgccaaag cggtccgcgc
     6841 cttgcgggac ccgccggggc gtcgcatgga actgccagga gcgccccatc cggccgcgct
     6901 acgcgcgtcc accctctccg aagaagaggg atctcaagct atctgcgcga ctgcgcgtta
     6961 agcttggctt cgagcgccgc gatccgctcc accagggttt catttgcttc aagtgccagc
     7021 tggaccatgt ctttgaggac ctcgaactcc tcgcgatgaa ctacgtccaa atcacgtaag
     7081 attcgctcgg cctgcgtgcg catgatggaa tcgaattcac gcctcactcc ttgagcaacg
     7141 ccggcggcgt cgttcatcag tctcgcgaat tcgtcataaa gccgccctgt agtctgcacc
     7201 attgctcgtc tccgtgcttc caaccgtcat gcccgtgcgc gttagcgcac gtgtatgacc
     7261 ggccgcggca cttttaaaat accaatcaaa gtcaaaggcg tagatagccc gcagccgcta
     7321 ccccaccggt ccacgcctca caatggcgaa cgggatgctt gtgcgcaagg tctggggcgg
     7381 ctagagcgct gtggtccccg ggttgatcgg atcgcgattc acccgggcct caagcaccgt
     7441 gcgcccccgg gtcttcgttc atgccgatct taactattcc gtttcccgac ctcgatccag
     7501 tgctcgtcag catcggcccc ctcgcgatcc gctggtatgc acttgggtac attttcggga
     7561 tactgttggg ttgggcctat gcgcgcgcca tgatccgcaa cgaacgaaat tggggtgggc
     7621 cggcgccgct caccgtcgcg gacatcgacg atttcatcct gtgggtgaca cttggcatca
     7681 tcctgggtgg ccgcaccggc tatgtgctgt tctacaacct gccgcatttc atcgaacatc
     7741 catcggagat ctttcaggtc tggaacgggg gcatgtcgtt tcacggcggc tttttgggct
     7801 gcgttgtcgc cgtcatatgg tttgccacga tgcgcggcct gccagttctg tcgctaggcg
     7861 acatcacctg cgcggcggcg ccgatcggaa tcatgctggt gcggctcgca aatttcatca
     7921 atggcgagtt gtggggccgg ttcaccgatg taccctgggc aatgatcttc ccgcgcggcg
     7981 ggccgatccc acgacatcca agccagctct acgaggcggg cctagaaggg ctcgctgtgc
     8041 tgatcgtgct cgcccttttg gtgcgggcgg gcgcgctccg gcgtcctggc ctcatcctcg
     8101 gcgccttcgc ggcactctat gcggtgatgc ggacgttctg cgaattcttc cgagaacccg
     8161 atccgcaact cggattcctg tggggaggca tgactatggg catgctgctc tgcataccgt
     8221 tgttcatcgc gggcgccttg ctcgtctcct ttgcgctgcg gcgccagccc gcgcattcct
     8281 gatgtcggaa catagcagtc ctctggaagc cgaaattcgc cggcgcatcg cactcaacgg
     8341 accgatcccg ctcgccgaat tcatgggcct ttgcctctac gacccgcagc acggctacta
     8401 ccaccaccgc attccgctcg gcgcggcagg cgatttcatt acggcgcctg agatcagcca
     8461 gatgttcggc gaattggtcg gcctgtgggc cgcggacgtg tggcgatcta tgggagcccc
     8521 cgatcaggtc gcactgattg agttcggtcc cggtcacggc accatgatga tggacagcct
     8581 gcgcgctgct cgggcggtgc cggagttccg caaggcggtg cgggtgcatt tgatcgagac
     8641 gagcgccgcc ctgcaacgac gccagcgtca gaccctgatt ggcgttgatg acgtgacgct
     8701 gcaatggcac gcagccatcg aggaggtgcc tgtcctgccc tccatcatcg tagccaacga
     8761 attcttcgat gcgctcccga tccgccaggc cgaacgccgc tctaccggct ggcacgaacg
     8821 ggcggtcgcc atcgacgccg acggtgagct ggcgctcagc gtcgcatccg atccgctgtc
     8881 cgatctcgtg ccggcgctgc cgcctaccgt cgcgcaggca ccgcttggcg cgattttcga
     8941 atggcggtct gatgatttcg cggtcaagat cgcacgccgg gtcgccaccg agggggcagc
     9001 gctcatcatc gattatggcc acctcaaaac cgcaaccggc gacaccttcc aggcagtgcg
     9061 attgcatcgc catgcgagtc cgctcgcatg gccgggggtg acggacctca ctgcccatgt
     9121 ggacttcgag gcactgggca aggcggcgca ggcgctcggc gcacgcgtcc acggcccgat
     9181 cgaacaggga acatggttga agcgtctcgg catcgaggcg cgcgccgccg tgttgcaggc
     9241 caatgctgcc gaacataagc gccccggtat cacggcagcg ctccaacgcc ttaccggaac
     9301 ggggccaggc cagatgggtt cgctgttcaa ggtgatcgga ttttcggcgc cgcgaatcgc
     9361 acaactgccg gggttcgtca cttgaccgaa cctgtccggg ctcacgcgct ggcgcggctc
     9421 gccggcatcc ggcatgcatt ctttacccgt gccggtggcg tctcgagcgg ggtttacgca
     9481 acgctcaatg ccggggttgg ctcgaacgat gcgccccgca atgtggccga aaaccgtgct
     9541 cgcatggcgg gcgccatggg cgtgccgccg gaccactttc tgacttgcta tcagatccat
     9601 tcgcccgcag ccgtggtggc ggtcgagccc tggggtgcag aggcacggcc ccgcgccgat
     9661 gcggtcgtca ccgcgacgac gggtctcgcc atcggcatct cgacggcgga ttgcggtccg
     9721 gtgctgttcg ccgatgcgca ggcgcgggtc atcggggcgg cacatgccgg gtggcggggc
     9781 gcgctcgcag gcgtcaccga ccaaaccatc gccgccatgg agcgtctcgg cgccgagcgc
     9841 aaacggatcg tggcggcgct cggcccgatg atccggcagc caaactacga gaccggaacg
     9901 gacctccggg accaattcgt cgccgccgat tccaccaacg cgcgcttttt ccgtccggct
     9961 ccccgcgagc agcattttat gttcgatctt gccgg
//
LOCUS       DATILV010000976         5620 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3823171, whole genome shotgun sequence.
ACCESSION   DATILV010000976 DATILV010000000
VERSION     DATILV010000976.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5620)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5620)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5620
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3823171"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2121)
                     /gene="addB"
                     /locus_tag="VLJ17_23575"
     CDS             complement(<1..2121)
                     /gene="addB"
                     /locus_tag="VLJ17_23575"
                     /inference="COORDINATES: protein motif:HMM:TIGR02786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000724 - double-strand break repair via
                     homologous recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="double-strand break repair protein AddB"
                     /protein_id="HSV25994.1"
                     /translation="MTSRVFTIPPSAPFLPTLIRALREGQLVDGFVPGPLDFADATIF
                     LPTRRACRLARDAFLQVLEVDAAVLPRIVPIGDIDEDELVFADMATGNVACDALALPP
                     ALGALERRFLLARLVLKWAERIAPPSGEAPLVVRHPAAALALADDLARLMDDMATREV
                     PWQRLDGLVPDELDQYWQLTLRFLLIAREAWPNILAERGATEPAMRRDRLIAAEAARL
                     ALRPDKPVIAAGSTGSMPATAKLLATIAGLPHGAVVLPGLDTQLDEESWDAIGGLALP
                     RHASLPPAPGHPQFAMHALLARMGIKRRDVGNLVAPAPHGRETLVSEALRPAVATDKW
                     RIRIGAIGAAVVPALAGVTVIQAANAEEEALAVAVALREALSESEGTCALVTPDRALA
                     RRVAVTLRRWNIVADDSGGVPLAETVAGVFARLAAEAVVSGLAPARLLALLKHPLARF
                     GADELTHGRSVAALERAILRGPRPRPGSMGLIGALTGFRSELAKFKRGEASNIHGADP
                     RVSFDVAELDEAEELLRRVAAALEPLESLAVSPRSQDFAGLAARHRETVKRAGTDGAA
                     EIFTGLDGAALAAVFDEIVEKVEPFAVTVEDYPELFGMAIADRVVRRPEAPGNRIRIY
                     GPLEARLANIDRVVIGGLVEGVWPPDPRPDPWLSRPMRHALGLDLPERRIGLTAHDFA
                     QLLSAREVFLTYPAKRGGAPTVASR"
     gene            complement(2287..3024)
                     /locus_tag="VLJ17_23580"
     CDS             complement(2287..3024)
                     /locus_tag="VLJ17_23580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HSV25995.1"
                     /translation="MTKFKGSPLPRRAMVLAAGLGMRMRPLTDGVPKPLVTVGGKALI
                     DHGLDRLAAVEVEIAVVNVHHLADQVERHLAGRKAPRIVISNERAELLGTGGGVVKAL
                     SHLGSAPFFHINSDAIWIDGAKPNLVRLAEAFDPARMDALLLLAGTTTSVCYEGRGDF
                     ALAPDGRIIRRREGEVVPFVYAGVAILGAALFSTAPPSPFSLNLLFDRAIEAGRLHGL
                     RLEGVWMHVGTPEAAAAAEAAIVASVV"
     gene            complement(3262..4023)
                     /locus_tag="VLJ17_23585"
     CDS             complement(3262..4023)
                     /locus_tag="VLJ17_23585"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV25996.1"
                     /translation="MKDDAPEIEFDGVTKSFARTDRSGGTFDAVGNLSFTVRRGELVA
                     ILGRTGCGKSTTFNLICGLLRPTSGRVTVQGRDPFAQFEWFRSKIGIVFQNDRLMPWR
                     TASANVELGLELNKVEKDTRAEIVASWLARLGLRDHGSDFPHALSGGMRQRVSIARAF
                     AIKPEILLCDEPFSALDEHTGNALREEFRGLLSETKATAIFITHSIEEALKLGGRLMV
                     FERPARIAYETRLRADMTESDRDEVRTNIRRALAN"
     gene            complement(4020..4751)
                     /locus_tag="VLJ17_23590"
     CDS             complement(4020..4751)
                     /locus_tag="VLJ17_23590"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HSV25997.1"
                     /translation="MALAGLAVAWQIASYFFPNFLFPTVPAIAERFMEIFSSFDTALD
                     AFATGGRILLGLAGAFILGGTLAAVMAQSSLFERYAYPLLSFNQGIPALSWVVIAIIW
                     FKGIEFRIFFIMVMTTLPAFTFQLLDAYRSVSNDLYEMTLSFRPSRYDLLRTLIWPTV
                     LPGILTSWKVNLGNASRVVVVAELVGATGGVGYQLLLQQQVFDMAGAIAWTIVLVIFV
                     LIVHSLITLIEMHALSYRAVSERQS"
     gene            complement(4846..>5620)
                     /locus_tag="VLJ17_23595"
     CDS             complement(4846..>5620)
                     /locus_tag="VLJ17_23595"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV25998.1"
                     /translation="DAYAAQFNSGEFKVGGSASVLILGLGNTRGIKISYLFNLFDYWG
                     TAVTNRSDIKMLADLKGKQIAAAKGTTNFTVFEWFAQQQGVEPKSLQVLNTATPGLLG
                     YALADRADVVQIWEPAYSLLLAKRPGIYTIDLNIPKVWQGYAGGERFPYLGVAAHQDW
                     IEQNRELIPRLYRAYRQAAEWVVAHPAEAVPLVAPVKEDAERQAIADMIRDNSRLAMN
                     LYPASKAVKEIEAVYRMGIAVGLFKALPDATSVYGGRLE"
BASE COUNT         1155 a         1780 c         1746 g          939 t
ORIGIN      
        1 gcgcgaagcg accgtcgggg caccaccacg cttggccgga taggtgagaa agacctcgcg
       61 cgcgcttaag agctgcgcga aatcgtgggc cgtaagtccg atgcggcgct ccggcagatc
      121 aagtccgagc gcatggcgca tcggccggct cagccacgga tcggggcgcg gatcgggtgg
      181 ccacacgcct tcgaccagac cgccgatgac gacgcgatcg atgttggcga gccgcgcctc
      241 cagcggaccg taaatgcgga tccgattgcc cggcgcctct ggacggcgca ccacgcggtc
      301 cgcaatggcc atgccaaaca gctccggata atcttcaacc gtgactgcaa agggctcgac
      361 cttttcgacg atctcgtcaa acaccgcggc cagcgctgcc ccatccaggc ctgtaaatat
      421 ctctgcggcc ccgtcagtgc ccgcacgctt gacggtctcg cggtgacgtg ccgcaaggcc
      481 ggcgaaatcc tgactgcgcg gcgagacggc tagcgattca agcggctcga gcgccgctgc
      541 gacacgtcgg agcaactcct cggcttcgtc cagctccgca acatcgaacg acacccgggg
      601 atcggcgccg tgtatgttcg aggcctcgcc gcgcttgaat ttggcgagct cgctgcgaaa
      661 acccgtaagg gccccgatca gacccatcga gcccgggcgg gggcgcgggc cgcgcaggat
      721 ggcgcgctcc agcgccgcca cactgcgccc gtgagtgagc tcatcggcgc cgaaccgcgc
      781 cagcggatgc ttcaagagcg ccaatagccg cgccggcgct aatccggaaa cgaccgcttc
      841 ggcagcgagc cgggcgaata cgccggcaac cgtctcggca agcggtacgc cgcctgaatc
      901 atcggccacg atattccagc gccgcaacgt cacagcgacc cgacgcgcca gtgcgcggtc
      961 cggcgtcact agcgcgcaag tgccctccga ctccgacagt gcttcgcgca gcgccaccgc
     1021 gacggcaagc gcttcctctt ctgcgtttgc cgcctggatg acagttaccc cagccagtgc
     1081 gggcacgacc gccgcgccga tcgcaccaat ccggatgcgc catttgtcgg tcgcgaccgc
     1141 cgggcgcaac gcttcgctca ccagcgtttc gcggccgtgg ggtgccggcg cgacgagatt
     1201 gcccacgtca cggcgcttga tgcccatgcg agcaagaagc gcatgcatgg cgaattgcgg
     1261 gtgtccagga gccggcggaa gcgatgcatg cctcggcagt gccaggccgc caatggcatc
     1321 ccacgattcc tcatcgagct gcgtatcgag gccaggcagc actacggctc cgtggggcag
     1381 acccgcaatg gtggcaagta atttggcggt cgccggcatg gagcctgtcg agcccgccgc
     1441 gatgactggt ttatcggggc gcaacgccag gcgcgcggct tcggcggcga tcaggcggtc
     1501 gcgtcgcatt gccggctcgg tagcgccgcg ttcagcgaga atgttcggcc acgcctctcg
     1561 cgcgatcaaa agaaaccgca gcgtcaactg ccaatattgg tcgagttcat ccggcaccag
     1621 tccatccaac cgctgccacg ggacctcacg ggtcgccatg tcatccatga gcctggcgag
     1681 gtcgtcggcg agcgccagcg cggcagccgg atggcgcacc accagcggcg cctctccgga
     1741 tggtggggcg atccgctccg cccatttcag caccaggcgc gccagcagaa agcggcgctc
     1801 cagtgcgcca agcgctggcg gtagagcgag cgcatcgcag gcaacattgc cggtcgccat
     1861 atcggcgaag acaagttcgt cctcatcgat atcgccgatc ggcacgatac gcggcaacac
     1921 tgccgcatcg acttccagta cctggagaaa cgcatcgcgg gccagccggc aggcgcgacg
     1981 ggtcggcaga aatatggtgg catcggcgaa atcaagcggt cccggtacga agccgtccac
     2041 cagttggcct tcacggagag cgcgtatcag cgtcggcagg aacggggccg acggcgggat
     2101 ggtgaacacg cgcgatgtca cggacgcaac accgtgaacg ggcgtcccac cccacccttc
     2161 cgggcaagcc agaaagggta ggttgagggc aatggcatcg tggtccgcga atgcagccgc
     2221 tcaaacacca gatgattcat tgcgtgatga tgtacgcgac aggtgattcc ccgaatcagt
     2281 actgtatcac accacgctag caacaattgc ggcttctgcg gcggcggccg cctcgggagt
     2341 cccgacatgc atccacacgc cttccagccg caggccgtgc agccggccgg cctcaatcgc
     2401 tcgatcaaac aacagattga gcgagaaggg gctaggcggg gctgtggaaa acaacgccgc
     2461 gccgagaatc gcgacgcctg cataaacgaa cggcacaacc tcgccctccc ggcgtcgaat
     2521 gatccggccg tccggcgcca gggcgaagtc accgcggccc tcatagcata cgctcgtcgt
     2581 ggttccggca agcagcaaca gcgcgtccat acgggcggga tcgaacgcct cggcaagacg
     2641 gacgagattg ggttttgctc cgtcgatcca gatggcgtcg gagttgatgt gaaagaacgg
     2701 cgcggagccg agatgggaca gcgccttgac gacccccccg ccggtaccga gcagttcggc
     2761 gcgctcgttt gagatcacga tcctgggcgc ttttcgtccg gcaaggtgcc gttcgacctg
     2821 gtcagcgaga tggtgcacat tgaccacggc aatttcgacc tcgaccgccg ccagccggtc
     2881 gagcccgtgg tcgatcaatg ctttgccgcc gacagtgacg agtggcttcg gcacgccgtc
     2941 ggtgagtggg cgcatgcgca tgcccaatcc ggccgccagc accatggcgc ggcgaggaag
     3001 cggggaacct ttaaatttcg tcatgtttgg tgctggccgg aaaccggcca ctcgtagcgg
     3061 caaaacagac cagttgattc aatggacaga tgaggaacaa gattcgttcc tagactgccc
     3121 agccctgtag tcgaataccc tgaactgagt cggggacaat atgaggatgt tatcatggcg
     3181 aaaggcggta aacgttacga gcggctcgac ggcggtcagg tgtcacgttt agctcggtaa
     3241 cagtcatcaa gaaatcctgc gtcaatttgc cagcgcccga cgaatattgg tccgcacttc
     3301 gtcacgatcg ctctccgtca tatcagcccg aagtcgcgtc tcataggcaa tccgggccgg
     3361 ccgctcgaac accatcaggc ggccgccgag cttcaaggcc tcctcgatcg aatgggtgat
     3421 gaagatcgcg gtcgcctttg tctccgacaa gaggccacgg aactcctcac gcaatgcgtt
     3481 gccggtgtgt tcgtcgaggg ctgagaacgg ttcgtcacat agcagaattt ccggcttgat
     3541 agcgaaggcg cgcgcgatcg agacgcgctg gcgcatcccc cccgacagcg catgaggaaa
     3601 atcgctgccg tgatcgcgaa ggcctagtcg cgcgagccag gatgccacga tctcggcacg
     3661 ggtgtccttt tccactttgt tgagttcaag gcccagctcg acattcgcag aggcggtgcg
     3721 ccatggcatc aggcggtcgt tctggaacac aatgccgatc ttgctgcgaa accattcgaa
     3781 ttgtgcgaac gggtcgcggc cttgtacggt gacgcgtccg gaggtcggac gcagcagccc
     3841 gcaaatcaga ttgaaggttg tcgacttgcc acaaccggtg cgaccgagga tcgctactag
     3901 ctcgccgcgc cgaaccgtga agctcaaatt ccccaccgca tcaaaggtgc cgcccgacct
     3961 atcggtgcgg gcaaacgact tggtgacacc gtcgaactcg atttcgggcg cgtcatcctt
     4021 cacgactgac gctccgatac cgcgcggtag ctcaacgcgt gcatttcgat cagcgtaata
     4081 aggctgtgga cgatcagcac gaagatgacc agcacaatgg tccaggcgat tgcgccggcc
     4141 atgtcgaaga cctgttgctg aagcaggagt tgatagccga cgccgcctgt agcgccgacc
     4201 agttccgcca ccacgacaac ccgggacgca ttgccgagat tgaccttcca ggatgtgaga
     4261 atgccgggca gcacggtagg ccaaatcagg gtgcgcagca gatcgtagcg gctcggacgg
     4321 aacgacagcg tcatctcgta gagatcgttc gaaacggagc gataggcgtc gagcaactgg
     4381 aatgtgaagg ccggtagcgt cgtcatcacc atgatgaaga agatccggaa ctcgatgccc
     4441 ttgaaccaga tgatggcgat cacgacccat gacagcgccg ggatgccctg gttgaagctc
     4501 agcagcggat aagcatagcg ctcgaacagc gacgattgcg ccatcacggc ggcaagggtg
     4561 ccgcccagaa taaacgcccc ggcaagcccc agcagaatgc gcccgccagt ggcgaaagcg
     4621 tcgagtgcgg tatcgaatga ggaaaatatc tccatgaacc gctccgcaat ggccggaacg
     4681 gtcggaaaca ggaaattggg aaagaagtag gaggcgatct gccacgccac cgcgaggccg
     4741 gcgagcgcca cgatactctc gaatttaccg aattgccttg tccttgcttg cgccccgcgc
     4801 gcccgcgtca gcgggggagg gttaggaggg acgctcctga cgtcatcact caagcctgcc
     4861 cccgtaaacc gacgttgcgt cgggcaatgc tttgaacaaa ccgaccgcga tgcccatccg
     4921 gtagactgcc tcgatctcct tcacggcctt actggccggg taaagattca tcgcaagccg
     4981 tgaattatcg cggatcatgt cggcaatcgc ctggcgttcg gcatcctcct tgacgggggc
     5041 gaccagcggt accgcttcgg ccggatgagc caccacccat tcggcggctt gcctataggc
     5101 gcggtaaagt cgcgggatca gttcgcgatt ctgctcgatc caatcctgat gggcggctac
     5161 tccgagatac gggaagcgct cgccaccggc atagccctgc caaaccttcg gtatattgag
     5221 atcgatggtg tagatgccag gtcgctttgc gagcaacaac gaataagcgg gctcccagat
     5281 ctgcaccaca tccgcgcgat ccgcgagcgc atagccgagc aggccagggg tggcggtgtt
     5341 gagcacctgc aacgatttcg gctccacccc ctgctgctgc gcgaaccatt caaaaacagt
     5401 gaaattagta gtgcccttgg cggcggcgat ttgtttgccc ttaaggtccg cgagcatctt
     5461 gatatcggaa cggttggtca ctgccgtacc ccagtaatcg aacagattga aaaggtagct
     5521 gatcttgata ccccgtgtgt tgccaaggcc gaggatcagc accgaggcac taccgccgac
     5581 cttgaactca cccgagttga attgcgccgc gtaggcatcg
//
LOCUS       DATILV010000977         3876 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_5094639, whole genome shotgun sequence.
ACCESSION   DATILV010000977 DATILV010000000
VERSION     DATILV010000977.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3876)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3876)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3876
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5094639"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..596)
                     /locus_tag="VLJ17_23600"
     CDS             complement(<1..596)
                     /locus_tag="VLJ17_23600"
                     /inference="COORDINATES: protein motif:HMM:NF024842.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HSV25999.1"
                     /translation="MATQEKVDVVIVGAGASGSVFAAVLAKAGKKVVVMDNGPDWQTS
                     DLISSDIWGRRVKPAGAPFILEGKHPVSMGAQGGWGVGGAALHYFANFPRLLPNDFRI
                     RSEHNRAHDWPISYDDVAPFYDKVGQEIGVSGDAKAEELWRPKGQPYPMPPMKTFRNG
                     KVWLKGFEANGIRMVPAAVGMNSIEFKGRAACIYDGWC"
     gene            complement(598..1158)
                     /locus_tag="VLJ17_23605"
     CDS             complement(598..1158)
                     /locus_tag="VLJ17_23605"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HSV26000.1"
                     /translation="MDAMERRVFLKGAGTGMLAFTVGGANMLMTPEQARAQGVPFRLL
                     KAREAETIEALGETLVPGAQRAGIAHFVDQQVSVPPGEALLEARQLNVKPPFVNFYRA
                     AIGAIDKAAEARSGRRFAVLATTEQRDFVDAMRQNKIDGWQGPAGSFVYLILRSDAVD
                     VVYGTIEGYESLGVPYMPHIAPEKRW"
     gene            complement(1624..2343)
                     /locus_tag="VLJ17_23610"
     CDS             complement(1624..2343)
                     /locus_tag="VLJ17_23610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26001.1"
                     /translation="MDGISSMTIAFRCPPELEPILPRPIPAVLGLPDWFKTMPQKTFS
                     TVLQTEQMTVKKCPPFIDAMTFGFLIPLIADIRAEDGMLSWDRDVPAGALTNYSRSPI
                     DFHDNNQVAGTPFFEEDRFLIKFANYWTFEMPAGYSLLITHPFNRHDLPFVTLTGLVD
                     ADTYRDNFINFPARWHDTGFNGVLPKGTPVAQCVPVKRDSWTGRFGVIEGEAVGRLQE
                     LSRAVLEETGVYRRRYRAPKR"
     gene            3144..>3876
                     /locus_tag="VLJ17_23615"
     CDS             3144..>3876
                     /locus_tag="VLJ17_23615"
                     /inference="COORDINATES: protein motif:HMM:NF014577.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HSV26002.1"
                     /translation="MGPVKRVLLGSAAGVFAVAGAQAADLPVKAKPVEYVKVCSLYGA
                     GFWYVPGTDTCIKVGAYTKLDVNYNASGNGAWVGGGGGGSIDTGGRQTRTDTANFNFR
                     ARGVASFDMRTQTEYGTLRSYLDVGAQLQTNAANVSTAPVTGASAIYSSRAFLQFAGF
                     TAGRIRSFFDMFNPGNYNIVQNRFNGDTNANGIAAIAYTWQFGGGLSASLSLEDGGFA
                     TGGHGRSTANLNNPNSFTVGGSEQSD"
BASE COUNT          777 a         1192 c         1171 g          736 t
ORIGIN      
        1 tggcaccaac cgtcatagat gcaggccgcg cggcccttga actcgatcga gttcatgccg
       61 accgcggccg gtaccatgcg gatgccgttc gcctcgaaac ccttgagcca cacctttccg
      121 ttgcggaaag tcttcatcgg cggcatcgga tagggctggc ccttgggccg ccacagctct
      181 tcggccttgg catcgccgga aacaccgatc tcctgcccga ccttgtcgta gaagggcgcg
      241 acgtcatcgt aggaaatcgg ccagtcatgg gcacgattgt gctcgctcct gatgcggaaa
      301 tcgttcggca gtaagcgcgg gaaattggcg aagtagtgca gcgccgcacc gcccacgccc
      361 cagccgccct gggcccccat gctgacgggg tgcttgcctt cgaggatgaa gggcgccccg
      421 gccggtttga cgcggcggcc ccagatatcg gacgagatga ggtcggacgt ctgccaatcc
      481 ggcccgttgt ccatcaccac gaccttcttg ccggccttgg ccagcactgc ggcaaagact
      541 gagcccgacg caccggcgcc gacgatgacg acatcgactt tttcttgcgt agccatgtca
      601 ccacctcttt tccggcgcga tgtgcggcat gtagggaacg cccaacgact cgtagccttc
      661 tatggtgccg tacaccacgt cgaccgcgtc gctgcgtaag atgagataca cgaaggagcc
      721 ggccgggcct tgccagccgt caattttgtt ctggcgcatt gcatcgacga aatcgcgttg
      781 ctcggtagtg gcgagcacgg cgaaacggcg gccgctgcgg gcttcggctg ccttgtcgat
      841 ggcgccgatt gcggcgcggt agaagttcac gaaaggcggc ttgacattga gctggcgcgc
      901 ctcgagcagc gcctcgccgg gcggaaccga aacctgctga tcgacaaaat gcgcaatgcc
      961 ggcgcgctgc gcccccggca ccagcgtctc gcccagggcc tcgatggtct ccgcctcgcg
     1021 cgccttgaga agccggaatg gcaccccctg cgcccgcgcc tgctccggcg tcatcaacat
     1081 gttggcaccg cccaccgtaa aggcaagcat gcccgttccc gcgcccttga gaaaaacgcg
     1141 ccgttccatg gcgtccatgg gttcctccgt gatgtcaccg gcgcggaggc gccagtggtg
     1201 tcgttgagtc aagtgaacga taaagaaggg gcggaatcaa gcggcgggca cacgcgttgt
     1261 ggaacgcgtg ccgcttactc gctgccccag tccggctctc gtccgtgatg aaaagattcg
     1321 acaacggtga gcgtgtcggc ggcgctgtcg atccggtaaa tacaacaaat ggcgtgcgcc
     1381 gaatcacgac ctcgtggata tctcgtcccg agcgatagac tccaacgcgc ggaaccgagg
     1441 cacacgccag aaggtccgcc ttcgtccatc ggcggaggcg cgtacgctct aaattagatc
     1501 gaaaacccgc gagccaagaa gcagttgcaa gaagcaattg gtggccgtca cactgcggtt
     1561 gcagaattcc cgggatgcta aaagtgcgcc cgcaggtaaa tgaattgtca gaggcgcgtg
     1621 atactaccgt ttcggcgccc gatatcgccg ccggtagacg ccggtctcct ccaagaccgc
     1681 cctggacagc tcctgcagcc gccccacggc ttcgccttcg ataacgccga agcgccccgt
     1741 ccagctgtcg cgtttgaccg gcacgcattg cgcgacgggc gtccccttcg gcaacacccc
     1801 attgaagccg gtatcgtgcc agcgcgccgg gaagttgatg aaattgtccc gataggtatc
     1861 cgcatcgacg aggccggtca gggtcacgaa gggcagatcg tggcgattga acggatgcgt
     1921 gatgagcagc gaatagcccg ccggcatctc gaaggtccag taattggcga atttgatgag
     1981 gaaccgatct tcttcgaaga acggggttcc ggctacctga ttattgtcgt gaaagtcgat
     2041 cggagagcgc gagtaattcg tcagcgcccc ggccggaaca tcccgatccc agctcagcat
     2101 gccgtcctcg gcgcgtatat cggcgatgag cggaatgaga aacccgaacg tcatggcatc
     2161 gatgaaaggc gggcatttct tgaccgtcat ctgttcggtc tgcaggaccg tactgaaggt
     2221 cttttgcggc atggtcttga accagtccgg aagcccgagc actgcgggta tcggccgcgg
     2281 caggatcggt tccaattcgg gcggacagcg gaacgcgatt gtcatggagc ttataccgtc
     2341 catcgtcggg tcccctcggt cggcgccagg tgcggcatta agttaagctg gggcgcaagt
     2401 taacgcccgt gcgctcttgc gggacatggc acagaacgaa atgaacagcc agagtgatgg
     2461 ctctgacact tcagctctga atggaatcgc cgtgtcatcg cccgtgaaac tttctccccg
     2521 cgaagccaag cggccggccc cggtaacccc ggcgatgccg acgattgctg gattccaact
     2581 tcagcgggaa agacaccgag aaggagaatc gacatacgcc ataggattcg attctcgacc
     2641 cttcggcatt tgcgcacctc ctgattcttg aatagggggc cctagccacg ccggatccgc
     2701 gagaatcgat gtgggggcgg cttgccccaa aaacggccat cacggcagtt cgcgacccac
     2761 aaacgtcatt cgccagcgaa gcgggggcaa ggacggtccg tcaccccaat tttaccagtg
     2821 gtcgatcact cgatggccac gctgattgcg atttctgctg atagattagg cagatctgga
     2881 aaaatcgcgg tgccttcccg aacggcctga tcggcattat taaccaagtt ttagccgtgc
     2941 ttttttggca acactgcctg agaaatcaac ctccgccgaa ccgaaaaggc ttggccagca
     3001 ttgcccgccg ccatcaaact ttatacaagt taaccgtaga gcaggtctcc gtggcgggga
     3061 tttgcgagtt gcggatacga atttaggtgg agttcgcccg caattcacat cttaggaatc
     3121 acccagtcat tgggagggga tatatgggac cagtgaaacg cgtacttttg ggctcggcgg
     3181 ccggcgtgtt tgccgtcgcg ggagctcagg cagccgatct tccggtcaag gccaagccgg
     3241 tcgaatacgt gaaggtctgc agcttatatg gggcgggttt ctggtacgtc cccggcaccg
     3301 acacctgcat caaggtaggc gcctacacaa aacttgatgt caactacaac gccagcggca
     3361 acggtgcctg ggtcggtggc ggcggtggcg gcagcattga cacgggcggc cggcagaccc
     3421 ggaccgacac ggctaatttc aacttccgcg cccgtggcgt cgccagcttc gatatgcgga
     3481 cgcagaccga gtatggcacg ttgcggtcct accttgacgt cggcgcacag cttcagacga
     3541 atgccgcaaa cgtctctacg gcccccgtca ccggcgcatc ggctatttac tcttcgcgcg
     3601 ccttcctgca gttcgctggg ttcacggcgg gccgcatccg ctcgttcttc gacatgttca
     3661 acccgggcaa ttacaacatc gtccagaacc gatttaacgg cgacactaac gccaacggca
     3721 tcgcggccat tgcctatacg tggcagttcg gtggcggtct gtcggccagc ctttcgctcg
     3781 aggacggcgg cttcgcaacc ggtggtcacg gcaggtccac ggcgaacctc aacaacccga
     3841 attcgttcac ggtcggcggt agtgagcaat cggatg
//
LOCUS       DATILV010000978         6843 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1014268, whole genome shotgun sequence.
ACCESSION   DATILV010000978 DATILV010000000
VERSION     DATILV010000978.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6843
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1014268"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            240..389
                     /locus_tag="VLJ17_23620"
     CDS             240..389
                     /locus_tag="VLJ17_23620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26003.1"
                     /translation="MPTVRRTLDLPAALSHSTNLSIGCYRKNEVGRHRSVLRELLTDR
                     GASLG"
     gene            501..812
                     /locus_tag="VLJ17_23625"
     CDS             501..812
                     /locus_tag="VLJ17_23625"
                     /inference="COORDINATES: protein motif:HMM:TIGR02118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EthD family reductase"
                     /protein_id="HSV26004.1"
                     /translation="MTTHLLILYPIPKDTAKFDRAYREEHLPYAGPRLVGATDVKTQR
                     VVGPGFVPPPYHLMSDVSFPTLDALKACAASESGKEALAHAASISSGGAPMLIVVTDA
                     A"
     gene            complement(1530..1820)
                     /locus_tag="VLJ17_23630"
     CDS             complement(1530..1820)
                     /locus_tag="VLJ17_23630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016846480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26005.1"
                     /translation="MKLNPTQIEQTLTQFAAQVIPEDHPVAPKLNEVFGDHTFFLDSN
                     GLNVVEPNEDTDGGLPAATVINLASWTGPDWTSLAPHEPEPTEVVVMLEMKH"
     gene            complement(1930..2805)
                     /locus_tag="VLJ17_23635"
     CDS             complement(1930..2805)
                     /locus_tag="VLJ17_23635"
                     /inference="COORDINATES: protein motif:HMM:NF018527.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1236 domain-containing protein"
                     /protein_id="HSV26006.1"
                     /translation="MMRANRLFTLATIAVLMGGTSLAVGQEMRGGAGGSAQGGGSVQG
                     GGMQRGGGTVGQAPSQSGPVQSKGSNARAEQGPTRRSEMSGERGSNARGAQGAERGRA
                     STEERGRVEERGRIGANERGRQEDRSRLDERGRRNERGQLGANERGRRDLEERGRRDE
                     RGQLGANERARRDEGGRLDERGRLEERSRAETTGRATSSTRTDNIGVNLSSEQRTRIH
                     DIVLSRRDIPRVSNLDVDVRVDSVIPRSVRLVAVPEDVVRIYPRFRRHRVFVYNDEIV
                     IVDPVTFRIIAVLPA"
     gene            3492..4097
                     /locus_tag="VLJ17_23640"
     CDS             3492..4097
                     /locus_tag="VLJ17_23640"
                     /inference="COORDINATES: protein motif:HMM:NF020376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIRAN domain-containing protein"
                     /protein_id="HSV26007.1"
                     /translation="MNEATITEWVPQLQRIGVALVIGFVPALIARWRRRPMTTWYLYG
                     FICALLAWPAVALPAIHALLVRPHGKPEQISQQRRRANAVALLREESVRSYPSWIAEL
                     RGKSPVEIERCRYAYQHLGPGEALALVRERAEPGDKHAVSYRHRDVHLGYVPKRHRWI
                     ADAIDDGLRLLAIVETVRTSWIYRRRATFVGTRIIVLKESR"
     gene            complement(4700..5317)
                     /locus_tag="VLJ17_23645"
                     /pseudo
     CDS             complement(4700..5317)
                     /locus_tag="VLJ17_23645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012045609.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M15"
     gene            5821..>6843
                     /locus_tag="VLJ17_23650"
     CDS             5821..>6843
                     /locus_tag="VLJ17_23650"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HSV26008.1"
                     /translation="MRPRSLRSIVSMFGIGTGVLYVAHLALIAKAASAPRFHLEEATI
                     ADVHRAIRAKEITAEQLVQLYFQRIEAYNGTCVKGEVDPATGLMFGEITPIENAGQVN
                     AYMTLNIRGKRSKTDPADNDPKMLDALETARAQDAYFARTGNFVGPLHGVPIAVKDNY
                     DTIDMRTTAGAAADYANDKPPRDATMVAKLRAAGAIILGKTNLDEYAPAGIGRSTLGG
                     QTCNPYDTKRITGGSSAGSAAAVAANLAICGLGTDTSGSVRYPSSLNALVGIVATQGL
                     VSRAGIVPLTFSRDRGGPMCRTVEDTAAVLEVLTGDDPRDAITAIAHGRQPVVYSNYT
                     GRHSLAG"
BASE COUNT         1305 a         2169 c         1952 g         1417 t
ORIGIN      
        1 cgatccgcaa gagggaaccc ggattgtcaa tcggcaggcc ctttttgcaa tgccgatgca
       61 caacccggat cggtacggtg tggcgtccgc ggcgtggcgt tccgaagaat gctatgcgcc
      121 cgacgatcgg tgcgatgtct gttatcccga cctcgcgccc ggcgcggagc tgatggcgca
      181 gagcaaagcg gcagtgacgg agacacggag gcgtccgcgc cttcaaagcg gagatggatg
      241 tgccgacggt gcgacgaacg ctcgatctgc cagcagcgct ctcgcatagc accaacctat
      301 cgatcggctg ctaccgcaaa aacgaggtcg gccgccaccg gtctgtgctt cgcgaactac
      361 tgacggaccg cggcgcgagc ctcggctagc cgccgcaaca gccgaggctc tggtcgcggt
      421 caggattccg taccgcatgt agatcggcca gcaacctata tccctctcgg gaaagcaccc
      481 cacaacgaaa ggaacatcct atgacgaccc atctgctcat tctctatccc atccccaagg
      541 acaccgcgaa attcgaccgc gcctatcgcg aggagcactt gccctacgcc ggaccgaggc
      601 tcgtgggcgc aaccgatgtc aagacccagc gcgtggtcgg gccgggcttc gtgccaccgc
      661 cctatcatct catgtcggat gtcagcttcc cgacgctcga cgccttgaag gcgtgcgccg
      721 cctccgagag cggcaaggaa gccttggcgc atgccgcttc gatcagttct ggcggcgcgc
      781 ccatgctcat cgtcgtgacc gacgccgcct agaacggcgc gctgcttgcg gacgacgggt
      841 cggcgtccaa gggcgccacc cgtcggctgc gacgcacctg cgacggcaga gacagctctt
      901 cggttcaaat tagcgatgca gatcacattc tatagtgcat cgagtatggg aagttcatga
      961 gggataggcc ccggcgatcg cgataatcat cgggagtcaa tgcggttcaa attgtgatgc
     1021 tcggccgtga cgcgaaaatt gcagtacccg tcgctcaaat ccatgcgagc cggcatcgat
     1081 gtaccgcgcg aacggcccgc cgacgcgaac gcacaacgtt cacgagcttc gacacgccca
     1141 gcgagccaat cccaaattgt tgcacggcgg ttcaagtcag ctatcaaggg cactccaggc
     1201 acccgccgtg caatcggcgt atccgaatcc gtgaaggttt tccgacaacg acccccggtg
     1261 ctagtggaaa tgtcgcgaag ggccgtcgtc ggaaaccctc cacaattgcg caagtgcgct
     1321 ctcgatccaa tttgatccga cgttctgtga caaagtcctt gcgagggctg cctgcgagca
     1381 aagctgctta gcctgccgac ggcgcagtgc ccccgctgtt ggggcagaat aggggaaacc
     1441 aacagggggg ccatggcatc ggcggccgat ggcaaagatg atcccgctca tggccttgtg
     1501 atgctattca gatgctgtcc tatagagcgt cagtgcttca tctcaagcat gacgaccact
     1561 tccgtcggct ccggttcatg gggcgccaaa ctcgtccaat ccggaccggt ccagctggca
     1621 aggtttatca ctgtcgccgc cggcagtccc ccgtcggtat cctcgtttgg ctcaacgacg
     1681 ttcaacccgt tgctatcgag gaagaacgtg tgatcgccga acacttcgtt caatttcggc
     1741 gctaccggat ggtcttcggg gatcacctga gctgcgaatt gggtcagagt ttgttcgatc
     1801 tgcgtggggt tcagtttcat tactcatcac tccattcttt tgccctgtca gcgtcgcgag
     1861 tagtgcgcgt aaaaaacgcc gcaatgggat gcactcattg cggcatttgc tttggtgctt
     1921 gcgtttaact tatgcaggaa gcactgcaat gatcctgaac gtcaccgggt caacaatcac
     1981 gatttcatcg ttgtagacga agacgcggtg ccgacggaac cgcgggtaga tgcgcaccac
     2041 gtcttccgga acggcgacca gccgcacact tctgggaatc acggagtcca cacgaacgtc
     2101 cacatcgaga ttggacaccc gcggaatatc ccgccgcgac aacactatgt cgtggatgcg
     2161 cgtacgttgc tccgagctga gattgacgcc aatgttgtca gttcttgtgc tgctggtagc
     2221 ccgtccagtc gtttctgccc gactacgctc ttcgagccgc ccgcgctcat ccagtcgacc
     2281 gccttcatcg cgccgagcgc gctcgtttgc cccgagctga ccgcgctcat cccgtcgacc
     2341 acgctcttcg agatcgcgcc gaccgcgctc gtttgctccc agctgaccgc gttcattccg
     2401 tcgaccgcgc tcatcaaggc gactgcggtc ttcttgccga ccgcgttcgt tggcgccgat
     2461 ccgaccgcgt tcctcaaccc gaccacgctc ctcggtgctt gcccggccac gctccgcgcc
     2521 ctgtgcgccg cgggcgttcg aaccacgctc gccggacatc tcgctccgac gcgtcgggcc
     2581 ttgctcggct ctagcgttgg aacctttcga ttgaactggg ccgctctggc tgggagcctg
     2641 gcctacggtg ccgccgcccc tttgcatgcc accgccttgc acagaaccgc cgccttgcgc
     2701 ggagccgccg gcgccgcctc gcatttcctg tccaactgcc aagctggtgc cacccataag
     2761 cacagcaatg gttgcaagag tgaaaagtct gttcgctcgc atcatttgtc tcctcttcct
     2821 gttcttcctg tctcttggag cgcgccctag aaaagcgcgt cacggtgcgt atctgcgtgc
     2881 cgacacgaag cgacccgccg gttcgccgcc cataggtccg gccgggtcgt cccatttcgg
     2941 tctgcgcaac ttgccctctc ggcgccgcac tcggccccac ttgcacgcgc gcccatgacc
     3001 gccgcgctgg cggtttcgca ttgtcgaaac gtcgaccaat gggaaatgat ggcgtcgtgc
     3061 cgttgttccg gaatctgtcg cccggactcc cgaaacaact tgtcgcacgt ggttcatcca
     3121 atattcatct atcgaccacg tccgatgtgg tggtgtcggt aaaggacgag gaagaacgcc
     3181 aaatcggttt caatgacgtg cgggaggccc cgacacgcaa cacgccagtc tggccgcccc
     3241 cttagggcgc ttgcccgctc accaaccggg tcggcttcgc attgatctct ttattaagga
     3301 gctcgattga ggagctcgac aatttcgatc ggctgttact tggcgcgcca acgccttgcc
     3361 atccgctcga ctcgcagccc ggcacaagtg gcgtttgcgc ggctgcggcc ccttggcgac
     3421 tctatgataa gctgacatcg ccttgatgaa acgtggtcgc gttcatctcg gtccccgttt
     3481 gaggcggcta tatgaacgaa gcaacaatca ctgagtgggt gccgcagctc cagcgtatcg
     3541 gggtggcgct cgtcatcgga tttgtcccag cactgattgc ccgctggagg cgacgcccaa
     3601 tgacgacctg gtatctttac ggcttcatct gcgccctctt agcgtggccg gcggttgcgc
     3661 tgccggcgat ccatgcgctt ctcgttcgac cgcacggcaa gcctgagcag atcagccagc
     3721 agcgtcggag ggccaacgcg gtggccctcc ttagggagga gagtgtgcgg tcttacccga
     3781 gctggattgc agagctgcgg ggcaaatcgc ccgtcgaaat tgagcgctgc cgctatgcgt
     3841 atcagcatct tggaccaggc gaggcgctcg cgctcgtccg cgagcgcgct gaaccgggcg
     3901 acaaacatgc cgtttcttat cggcatcgag atgttcatct cggctacgtc cccaagcgac
     3961 accgttggat tgccgacgcg attgatgacg ggcttcgcct ccttgccatc gtcgaaacag
     4021 ttaggaccag ctggatttac cgccggcgcg cgacgttcgt cggcacgcgg attatcgttc
     4081 tcaaagaaag ccgttagcgg tacaccggcg aaggcgcggc gaagtgcgtg acccagcagt
     4141 attcgtcttt tgctccaacc cacgtctccg cttaccggcg gagcgacgtg atgaccaatg
     4201 catacagccg gatattcaat gtaagataaa tatctcagtg gctgtttgct gctctggtca
     4261 tgcaggcgtt gatggatcgc atgccggcat ttcgcacccc gagagattcg aatcaagttg
     4321 aacgagtttg tggtctcgat ggcgcccttg caggcctttc catccgtgcg cccttcgaca
     4381 cgctgtgatc gttgtgcgga gcgaccagct cctgcttctt ggccttcaac tgcgcgattt
     4441 gcgtcttcgg ctggacacgg tgagcggcat actttttgtc gtcgatcgga gtgacatctc
     4501 gaccgagatt gtgcggagcg accagctcct gcttcttggc cttcaactgc gcaatttgcg
     4561 tctttggctg gacacggtga gcggcatacc ctttgccgtc gatcgaagcg atatgtggcg
     4621 cgtctcgagc gagattgtgc ggagcgaccg gctcctgctt cttggccttc aactgagcaa
     4681 tttgcgtctt tggttggaca cggtgagcgg catactcttt gccgtcgatc ggagcgacat
     4741 gtggcgcgtc acgatcaaga tatggtctgc cgattccaag ctctttgtcg tgtacatcga
     4801 tccatttcca caattgctcg ctggcagccc atcgttctgt acgcgtcttg ccctttacgc
     4861 tcacgatatc gaccgctagc ccgtgaccat acccgccgcg gaagcttccg ccatgatatg
     4921 acctgtcggt ttgagccttt tggcccgccg cgatagcttg ccgataatcg tcgcgaaatg
     4981 cgctagttat acctggcatc aggccggctt cgtcgagcgc gcgcagcgcg cgatagagcg
     5041 tgcccctgaa gccggagtcc atgccgccaa tcacgtaatc catgggagac atcccggctt
     5101 ttttggcggc atctggatcc ttccatgtga agtcctcatc cacgagcttc gcgatcgttt
     5161 ttgtgacgat cttggtttta cctttccgtt taaccgtcac ctttgtctgt tccgacacct
     5221 taatcgtgtc gacctttcgc gtgcgctcgt atagcgacca aagatagcgg tcgatgcaaa
     5281 tctgcgccac gatgcattca tcgacgttgt caatttcgct cacgtcgatg gaacctgtct
     5341 cgacggagct cgcgccgata gaacccgtgt ttatgtctgc ttgggcaaga gctaaaacag
     5401 cagagagcac tatgccgaca ctgccgcaga cggaacaata gagtgcgtgt gtgggactca
     5461 tccccctctc cctacctatt tcattccatg tcaatcacaa aaatacctca gcaagctcgg
     5521 gcgtcgctca ggcatgttgc caatttacta tgtggtaaga tgaactcacg atgaacgatc
     5581 agcgcccaat atgacctgag cacacctcga acagctttaa gaacgccccg gagaccgtcc
     5641 gcgtggcctg ggcctgggaa cattggtcgg cgatcgatcg caggcctccg aaataaagct
     5701 aactgcccca gccgcgaagg tccggccgcg accgcgctgt aaaatcgcta cccggaacgc
     5761 gaattgactc ggaatgccaa cggcatacca tacgaaaaat tcatttcggg agggagtgcg
     5821 atgcgtccgc gaagccttcg ctcgatagtc tctatgttcg gcatcggtac gggggtgtta
     5881 tacgtcgcgc acctcgcgct tatcgcgaaa gctgcctctg cgccgcggtt ccatctcgag
     5941 gaagcgacaa ttgccgacgt gcaccgtgcg atccgggcta aagagatcac cgcagagcaa
     6001 ctcgtccagc tctatttcca gcgcattgag gcttataacg gcacctgcgt taaaggcgag
     6061 gtcgatccgg caaccgggct catgttcggc gaaataaccc cgatcgagaa cgccggccag
     6121 gtgaatgcct acatgacgct caacatccgc ggcaagcgtt cgaagaccga cccagccgac
     6181 aatgacccga agatgctcga cgccctcgaa acggcgcggg cgcaggacgc gtattttgcc
     6241 cgaaccggca atttcgtcgg gccgttgcat ggcgtcccaa tcgccgtaaa ggacaactac
     6301 gacaccatcg atatgcgcac gacggcaggc gccgccgccg attatgccaa cgacaaaccg
     6361 ccaagagatg ccaccatggt ggcaaaactg cgcgcggccg gcgcaatcat cctcggcaag
     6421 accaatctcg atgaatatgc gccggccggc atcggccgca gcacgctcgg cggccagacc
     6481 tgcaatccct atgacaccaa gcgtatcacc ggcggttcca gtgccggctc ggcggcagcg
     6541 gttgccgcga acctcgcgat ctgcgggctc ggcaccgaca cctcagggtc ggtgcgctat
     6601 ccgtcgtcgc ttaatgcgct ggtcggaata gtcgcaacgc aggggctggt gagccgcgcc
     6661 ggcattgtgc cgctgacgtt ctcacgcgac cgcggcggcc ctatgtgccg caccgtcgag
     6721 gacacggcgg ccgtgctcga agtgctcacc ggcgatgatc cgcgcgacgc catcacggcc
     6781 attgcgcacg ggaggcagcc ggtcgtctat tcgaattaca ccggccgcca ttcgctcgcc
     6841 ggc
//
LOCUS       DATILV010000979        12118 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1268671, whole genome shotgun sequence.
ACCESSION   DATILV010000979 DATILV010000000
VERSION     DATILV010000979.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 12118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12118
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1268671"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            979..2532
                     /locus_tag="VLJ17_23655"
     CDS             979..2532
                     /locus_tag="VLJ17_23655"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSV26009.1"
                     /translation="MSRSNKLTLLVSTVCAVAVPALAIANIDSLLSNPTVRSGYDAAE
                     AAVGSILNSIRPPRPSGYDTVEATVGSISRVVTTSGPVRPWTTVQIGSQLSGQIQRVF
                     ADFNSEVKEGDILAELDAKTFEARVEQAEADLVMARAALASQQATLLKAEAVLHEAEQ
                     SRSRQQSLSQKGVTTQALLDTIVRDTSVAQAEIAITKAQIENAQANVKQREALLNQAR
                     IDLDRTRISSPINGTVVSRTVDIGQTVAASLQAPELFRIAQDLRSIYIEAQVNEADVG
                     AIAKGNPATFAVDTYPGRLFEGSVAQVRLAPNEVQNVVTYSVVIEASNADLKLFPGMT
                     ANVRIETARHDDALRISAEALRFRPPGAVAKPEGTASRSEGSKRQIERLKELLKLTDD
                     QVKALSLALTRHSGGREPDGTDLVSPDETKSQSEKAAAKTGSRSTDIEAALRPLLTTE
                     QQRTFETWKAKRDATHSATVYVLGPDGQPEMRAIRIGLSDSHFAEVVSGPLKAAEALI
                     VRARKETVR"
     gene            2529..3296
                     /locus_tag="VLJ17_23660"
     CDS             2529..3296
                     /locus_tag="VLJ17_23660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003608291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV26010.1"
                     /translation="MRSDIDKTGRSPAAPSLICLRRVSRIYPMGEETVTALDTVSLDI
                     VQGEFLAIMGPSGSGKSTMMNMIGVLDVPTSGRLLIDGHDVARLSADEQAVLRNRTVG
                     FVFQQFNLLPRTTALRQVLLPCLYARPRVPDPEAAARHRLEQVGLGGRLNHRPNQLSG
                     GQQQRVAIARALVNNPKIILADEPTGALDTRTSEEIMALFAELNAQGITVVIVTHEPS
                     VAGATRRVVTFRDGRIVGDSAGRSQEPTTRVLERLAS"
     gene            3293..4525
                     /locus_tag="VLJ17_23665"
     CDS             3293..4525
                     /locus_tag="VLJ17_23665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020085291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV26011.1"
                     /translation="MTMWECIGVAIMALGTHGLRSLLTTLGIVIGVASVIVMVAVGTG
                     ARTEVERQINSLGTNLLQIQPGSSRISGRAAGSGTSLPLSEGDVVAIKDQVPGVQAIT
                     GTLTRPVPVVSGNMNWLTSVNGVHADYFAIRDWEPSSGRVFDDVEAKGGARVAVIGAT
                     VAQQMFGQQDPRGAVVRVLNTPFTVIGVLEPKGQSTTGRDQDDLVLIPMTTARMVIVT
                     RNKLVPTQVGAITVKLEPDAPVAKAKEEIEQLLRERRRVQAGREDDFFVRDLAEYLRT
                     RAAAQQTFGLLLGATAAISLIVGGIGIMNIMLVSVTERTREIGLRRAVGARQRDIMMQ
                     FLVEAVSLCMLGGLIGLALGVIGTALIAFFAQWPVLVNAQIIALAIVAAAATGIFFGF
                     YPARRAAALKPIEALRME"
     gene            4663..6096
                     /locus_tag="VLJ17_23670"
     CDS             4663..6096
                     /locus_tag="VLJ17_23670"
                     /inference="COORDINATES: protein motif:HMM:NF019736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26012.1"
                     /translation="MQTNIGRRSKKALVFGAGKMACALLGELLCKAGFETLFVARGRN
                     IASINRQKGYFVGLCGEPRWMRVRDCAALAIAEPDAIVEAVTEADIVFTAVGIDNIPA
                     IAPVLAEGLSRRLDHVRPPLNVVAAENLPGTGAYLRHQIVGAASFEKALLLKKCVGFS
                     AALTHRIMTGGGSIDGVLHFAVDAPGDLIIDRRGLIEPLPEIPHTSVSDEFDALFLEK
                     LATTNLAQAVASYLGHRKTCRFVHEAAAHSKIAPIVQAAVDEAAAAFQAEFPDLGAMV
                     ARDAEKAITRIADPRLGDPVERICRDPLRKLGSRERMIGPARLAAKHGLPHENLVHAI
                     AAALTYYDERDVQSKILQYVIADEGLDYVLTAVSGLLPHEPLAQEIKVAWAGLVQEKA
                     STPPQFNRKHVVERMISDVVGEIAAKMENIDVALHVREIADEFSGARITAFLPSLVRK
                     KFHDRLQQHGHLQRTSQRQDVRHAQAG"
     gene            6140..6994
                     /locus_tag="VLJ17_23675"
     CDS             6140..6994
                     /locus_tag="VLJ17_23675"
                     /inference="COORDINATES: protein motif:HMM:NF020032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26013.1"
                     /translation="MWTNKMKLGVIAETRYLAQNMPEAAIAVLHARGYAVDLISPDGG
                     HLAVDSGVFTDANGQRFRLRDYDVVVSRNRNALGLVLLRYAEAAGIAVINTHAAVQRV
                     RNKAEMAVALALASVRAAPTLLAGATETLPAPLDGRFPVILKATYGDNGQGLRLVRNH
                     DELSQLSWSSEVVIVQQYLPNDTYDLKLYVCGAHIFAVRKPSPFNGDPRAPSISISIT
                     AEMAALARRCGEVFGLELYGVDCIETETGPVVIEVNDFPNYTGIPGIGELVADEILMC
                     AEQKRDRP"
     gene            6991..7833
                     /locus_tag="VLJ17_23680"
     CDS             6991..7833
                     /locus_tag="VLJ17_23680"
                     /inference="COORDINATES: protein motif:HMM:NF020032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26014.1"
                     /translation="MRIAFFMQGLAGDRSVPHVSTVMEQVFGSLRKAGAEVNLLVAES
                     RAWDLAHIEPNHDLYVLKSKSPLTLSLATILREKGADIVNSVESCRLARDKIAAEVAL
                     VTRNLPVPATWTTGQGRLLRPLINDGALWLKPRSGSKGRGVARVIDSADAAFAENPTD
                     HYGLPQPLFAQRDVPSAGLDTKVYVVGERHWAITRPWPARTAQDKQGQHASIDADLRA
                     AAVACGEALGLEIYGVDFLIAGRERHVVDINAFPGFKGVGEAAGEIASYLLRRLTVAA
                     ARAA"
     gene            7895..8629
                     /locus_tag="VLJ17_23685"
     CDS             7895..8629
                     /locus_tag="VLJ17_23685"
                     /inference="COORDINATES: protein motif:HMM:NF020032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26015.1"
                     /translation="METAALLENRGARVSMIYPEQELWRLDTLRVDADLYLLKSDSEL
                     ALSLAHSLELLGGRVLNPHDACRKVKDKAVTAALLCQSGIPTPSSYAAGHPGQLEHHL
                     QGGALILKPNRGYHGVGLAIARDASALARARDYADVVFAQSYFVDARKDLKLFGIGDE
                     VFALRKPFSTDSFLQSGIPAELAPEHEEIAHRCAKTFGLSLFGVDLVEEDGRAFVVDV
                     NYFPGYRGVPNAAQLLSSFIWQQCGG"
     gene            8617..9870
                     /locus_tag="VLJ17_23690"
     CDS             8617..9870
                     /locus_tag="VLJ17_23690"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV26016.1"
                     /translation="MRWLIVTKLAFPQLAIGTLFRPKLQNMSVQPTMIALVAEGFLTR
                     LGFGMIGFALPLYALSLGTSIAKIGLLYVLSTIVSLAMKPAMGWLADRVGRKRILVGA
                     VLLRCLVGLLLVFATLPWQLFAIRGLQGAMTAAREPSIMALLAEHGSKKRMASAFAWY
                     ATARDLGRSLGYGAAGLLITYLGFWWVFLLAFACSCAALFTVLRYVEERKTAEPKEIM
                     KHARLFTEEKPAAGIRPRLFRYAGFGLLVTLTAEMMRGLFPVVATQYAHLSEADAGIA
                     ASAASIAILIGGPLFGWFADRGNRNLVLSLRSFANAGSCVLYMLFPNFTGFLTGRTLD
                     DMGKAAFRPAWGSMLVEISEHDEKTRAQTMAILDTTSDVGEILGPILAGLLISAFGIP
                     GMLAVRIVLALVTEAQAYMLFRKIE"
     gene            9935..11272
                     /locus_tag="VLJ17_23695"
     CDS             9935..11272
                     /locus_tag="VLJ17_23695"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HSV26017.1"
                     /translation="MTWSLNEVRIPEALSAHCRWRATPTLGGGVHGAPASKEIYGTVR
                     LQGKDSVKRPCRQAEAHCGMTSELRGSKLSLRQEERYLGFFMRYLAVLLVAVLKFINP
                     ANAGDLPRYDHIFVIIAENHGFDQIIGKSYAPNINQLAAAYGLATNYYGIVHPSEANY
                     IAMIGGDTFGVRDDDAWYCRRGHPDRHCASQRSTDPYFDHTVTERSLVDQLRERNLTW
                     KGYYESIPAPGSMAVYFPDAQNPVAGQPNRLYAAKHNGFLNFKTVQTDPNLATKIVSF
                     DQLLEDLASGQVPNYAHIVPNQCNNMHGLSGPDVPDDCSSRNDVGRIARGDRVIGELV
                     AKIQASPMWSAQRHAAVVITWDEDHDPREKSDPQGCCGFDPESLANFGGGRIPTIVIT
                     NHGPRGVTDSTLYNHYSLLRTTQEAFGVDEYLGHAKDEHLGVKTMTPLFEVTN"
     gene            complement(11653..>12118)
                     /locus_tag="VLJ17_23700"
     CDS             complement(11653..>12118)
                     /locus_tag="VLJ17_23700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004123182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EmrB/QacA family drug resistance transporter"
                     /protein_id="HSV26018.1"
                     /translation="VSQAEIVAVGMVQGAGLGFLFVPLSSVTLATLAPAERTEGAGLY
                     NLARNIGSSVGISVVNALLTSNTQVNHAEIAVHVSAVNRAFENPSIAQFWNPVGAAGR
                     AALDAMITQQAQIIAYIDDYKLLMIATLAIIPLLVVFKKSAHRSKDHAAVEL"
BASE COUNT         2459 a         3528 c         3628 g         2503 t
ORIGIN      
        1 gtcagtgggc agttataatc aacattttat cggaggcttt ttcaacgcgt tgaatgggcc
       61 gccataaacg cgcccgatat tttggtatta tctcgctgca cataagtaat aatacgtgta
      121 cacggacgca tggtgcctac aaactaccgc gacctgtctt gagtgatttc cgagcgtttc
      181 aggaatcggc gatgaagctg aaacgattcc ttattagccg cgctttcaat taaactcacg
      241 ccgatgtcac gtaacttcac agatttggaa tttctgacga ctcgccgcgc tggcgtgtcg
      301 aaaagcataa gattggctga ggatgataaa cgggggattt ccccctccat agtgggttat
      361 atcgccaaaa aactcgagct tgtgtgcatg cgttcgactt gaactaacgg gctaatttcc
      421 tgcgtttctc gcatataact ttgcggcttt gaattggcat ggcaattgca cagttgtttt
      481 ttgaatgagg ttttgtttaa agaaggtatg ccagcaaatg aacaaccatt taccactcga
      541 agccaacagg atgtcgaaaa tcggcacgac acttatatgc gttcggcgca atttccatga
      601 ttatcgggcg caaccatctt atcgccgtga tgtagcaatg tggtcaaggc cgaccacgcg
      661 tccgcactta tgttcgtaag tgggatgtca gacaagatat gccacacgac ccgtcctgga
      721 gataatacat tttacgtcga attagatgca tcgctatccg gtggttgtcg ggcattcgac
      781 gtaactgctc tgcatgggac attagtatta tgaacacgct cgttgcttat gtcgacggct
      841 gctgccgggc tggaggggtc gcgttatctg cgatcttggc gtgcgctcgc acgacgcctt
      901 cccggcggtc tggtcgttcc tcgaacccac cacaaaccac gtcgcggaat agacaaatca
      961 cgtcatggaa tatacgtcat gagtagatcg aacaaactga cgctccttgt atcgaccgtg
     1021 tgcgctgtgg cggtgcctgc actggccatc gcaaacatcg actcgctgtt gtccaatcca
     1081 accgtacgat ccggctacga tgctgcggag gcagcagtcg gctcgatctt gaacagcatt
     1141 cgcccgcccc gcccttccgg ctacgacact gtcgaggcga cggtcggctc gatttctcga
     1201 gttgtgacga cctcgggtcc ggtgcgccca tggacgaccg tgcagatcgg gtctcagctg
     1261 tccggccaga ttcagcgtgt gttcgcggac ttcaacagcg aggtaaaaga gggggacatt
     1321 cttgctgagc ttgatgccaa gacgttcgaa gctcgtgtcg agcaggccga ggccgatctc
     1381 gtgatggcaa gggccgcgct cgccagtcag caggcgactt tgctcaaggc cgaggcggtg
     1441 ctgcatgagg ccgagcaatc gcgtagccgc cagcagtcgc tttcgcagaa gggggtcacg
     1501 acacaggcct tgctcgatac aatcgtgcgc gacaccagcg ttgcgcaggc cgagatcgcg
     1561 atcacaaaag cccaaatcga aaacgcgcaa gcaaacgtca agcagcgcga ggcgctcctc
     1621 aaccaagccc gcatcgacct cgaccgcacg cgcatctcct cgccgatcaa cggcacggtc
     1681 gtctcccgca ccgtcgatat tggtcagacc gtggccgcca gtctgcaggc gccggagctg
     1741 ttccgcatcg ctcaggatct gcgcagcatt tacatcgagg cccaggtcaa cgaggcagac
     1801 gtcggcgcga ttgccaaggg caatccggcg accttcgctg tggacactta tccaggtcgg
     1861 ttgtttgaag gaagtgtcgc ccaggtccga ctcgcgccca acgaggtgca gaacgtggtg
     1921 acctattcgg ttgtcatcga ggcgagcaac gccgacctga agctgtttcc cggcatgacg
     1981 gccaacgtcc gtatcgaaac ggctcggcat gatgacgcgc tcagaatttc tgcggaagcc
     2041 cttcgtttca ggccgcccgg agcggtggcg aagcccgagg gcacagccag ccgaagcgaa
     2101 gggagcaaac gccagatcga gcgtctgaag gagctgctca agctgaccga cgaccaagtc
     2161 aaggcgctca gcttagcgct gaccaggcac tcgggcgggc gcgagccaga cggcaccgac
     2221 ctcgtctcac ccgacgaaac gaaatcgcaa tccgagaagg ctgcggcaaa aacaggcagc
     2281 cgctccaccg acatcgaagc agcattgcgc cctctgctca ccaccgagca gcagcgtacg
     2341 ttcgagactt ggaaggcgaa gcgcgacgca acccattcgg caacggtcta cgttctcggg
     2401 cccgatggcc agccagaaat gcgggcgatt cgcatcggtc tcagcgattc ccattttgcc
     2461 gaggtcgtca gtggccccct caaggcagcc gaggcgctca tcgtcagggc tcgcaaggag
     2521 actgtgcgat gagatcggac atcgacaaga cggggcgctc acctgcagcg ccgtccctga
     2581 tctgccttcg cagggtctcg cgcatatacc cgatgggcga ggaaaccgtt acggcgctcg
     2641 acaccgtatc tctcgacatc gtgcagggcg agtttctcgc aatcatgggc ccgtccggat
     2701 ctggcaagtc cacgatgatg aacatgatcg gggtactcga cgttcccacc agcggccgac
     2761 tgctcatcga tggacacgat gtcgcgcgct tgtcggcgga cgagcaagcc gtcctccgta
     2821 accggacggt cggcttcgtg tttcagcaat tcaacctgct gccgcgtacg acggcgttgc
     2881 ggcaggtgct gctgccctgt ctctatgcgc ggcctcgcgt gccggacccg gaggcggccg
     2941 cccgccaccg cctggagcag gttgggctcg gcggacgctt gaaccatcgg ccgaatcagc
     3001 tctccggtgg ccagcagcag cgtgtcgcaa tcgcccgcgc gctggttaac aaccccaaga
     3061 tcattcttgc ggatgagccg accggcgccc tcgacacgcg cacttccgag gagatcatgg
     3121 cgctgttcgc agagctcaat gcgcagggca tcacggtcgt gatcgtcaca cacgagccga
     3181 gtgtagccgg cgcgacccgg cgggtggtga cattccgcga tggccgtatc gtcggcgatt
     3241 cggccggcag aagccaggag ccgacgacgc gcgtgctcga gaggctggcg tcatgaccat
     3301 gtgggaatgc atcggcgtcg ccatcatggc tcttggcact cacggccttc gcagcctgct
     3361 gacgacactt ggcatcgtga tcggtgtggc ttccgtgatt gtcatggtcg ccgttggcac
     3421 gggcgcgcgc accgaagtcg agcgccagat caacagcctg ggcaccaacc ttctccagat
     3481 tcagcctggg tcaagtcgga taagcggacg tgccgccggc agcggcacga gcctgccact
     3541 ctcggaaggc gacgtcgtgg cgatcaaaga tcaggtgccg ggcgtgcagg cgatcaccgg
     3601 aacgttaacg agaccggtgc ctgtcgtcag tggcaacatg aactggctga cgagtgtcaa
     3661 tggcgttcat gccgactact tcgcgattcg cgattgggaa ccatcgagcg gccgcgtgtt
     3721 cgacgacgtt gaggcgaaag gtggcgcgcg cgtggccgtg ataggcgcga ctgtcgcgca
     3781 gcagatgttc gggcagcaag acccgcgggg cgccgtggta cgcgtgctca acacgccttt
     3841 tacggtcatc ggcgtgctgg agccaaaggg ccagtcgacc actggccgcg atcaggacga
     3901 tctcgttctc attcctatga caacggcgcg catggtcatc gtcacgcgca acaagctggt
     3961 gcccacccag gttggggcca tcaccgtgaa gctagagccc gatgcgcccg tcgctaaagc
     4021 caaggaggag atcgagcagc ttctgcgtga gcgccgccgc gttcaggccg gccgcgagga
     4081 cgatttcttt gtgcgcgacc tggcggaata cctgcggacg cgcgctgctg cccagcagac
     4141 gttcggccta ctgcttggcg cgacggccgc gatctctctc atcgtcggcg ggattgggat
     4201 tatgaacatc atgcttgtct cggtaactga acgtacgcgt gagatcggct tgaggcgcgc
     4261 cgtcggcgcg cggcagcgcg atatcatgat gcagttcctc gtagaggccg tgtccctgtg
     4321 tatgctgggt ggcctgatcg ggctcgcgct cggggtcatc ggcacggcgc tgatcgcctt
     4381 tttcgcgcag tggccggtgt tggtgaatgc ccagatcatc gccctcgcca tcgtagccgc
     4441 tgcggccacg ggaatctttt tcggctttta tcctgcgcgc cgtgctgccg cgctgaaacc
     4501 gatcgaggct ctgcgcatgg aataggtgat cagttgggtt gtgggcgtcg gtgcgctcgc
     4561 ggctactgca ccagatacca atgacatgac atcgagctga aggcctgcat tgtggccttc
     4621 acttgcgaag ccaggcgcca atgagggagg cggagttcca gaatgcaaac taacattggc
     4681 agacgctcca aaaaggcctt ggtctttggc gccggaaaga tggcgtgcgc gctgctcggc
     4741 gaattgttgt gtaaggccgg ctttgaaacg ctctttgtgg ctcgcggccg caacatagcg
     4801 tctatcaata ggcaaaaagg ctatttcgtc ggcctgtgcg gggaaccacg ctggatgcgt
     4861 gtgcgggatt gcgctgcgct tgccattgcc gaaccggacg ccattgtcga agcggtgacc
     4921 gaggcggaca tcgtctttac cgccgtcggc atcgacaaca ttccggcaat cgcaccggtg
     4981 ctcgccgaag gcttgtcgcg ccgactcgat cacgtgaggc cgccgttgaa cgtcgtcgcc
     5041 gcggagaact tgcccggaac cggcgcctat ctgcgccacc aaattgtcgg cgcagcctct
     5101 ttcgaaaagg ccttgctgct caaaaaatgc gtagggttct ccgcggcatt gacccaccgt
     5161 atcatgaccg gcggcggctc gatcgatggt gttcttcatt ttgccgtcga tgcgccgggg
     5221 gacctgatta tcgatcggcg cggcttgatc gaaccgctgc cggagatccc tcacacgagc
     5281 gttagcgatg aattcgacgc cctttttctc gaaaaactcg ctaccaccaa tctcgcccag
     5341 gcggttgcct cctacttggg gcatcgcaag acctgtaggt tcgtgcatga ggcagcagcg
     5401 cacagcaaga tagcgcccat cgtccaagcc gccgtagatg aggcggccgc cgcgttccag
     5461 gccgagttcc cggatctggg cgcgatggtg gcgcgcgacg ccgaaaaggc aatcactcgg
     5521 atcgccgatc cgcgtctggg agatcccgtg gagcgcatct gccgcgatcc cctgcgcaag
     5581 cttggctccc gggagcggat gattggcccc gcccgtttgg ctgccaagca tggcttgccc
     5641 catgagaact tggtccacgc gattgccgca gcgctgacgt actacgacga gcgcgacgtg
     5701 cagtccaaga tcctgcagta cgtcatcgcc gacgaaggtc tcgactacgt gctgacggca
     5761 gtctctggtc tgctgccaca tgaaccgctg gctcaggaaa tcaaagtggc atgggccgga
     5821 ctggtacagg aaaaagctag cacaccccct caattcaatc gcaagcatgt cgtcgaacga
     5881 atgatcagcg acgtggttgg ggagattgct gccaagatgg aaaacatcga cgtcgcgctc
     5941 catgtgcgcg agattgcaga cgaattcagt ggcgcacgca tcacggcctt cttgccgagc
     6001 ctggtcagaa agaaatttca cgaccgactt cagcagcatg gtcatttgca acgaacgtcg
     6061 caacgccagg atgtaagaca tgcccaagcg ggatgacatc cggtgctccg gacgactccg
     6121 aagtcgagaa ctcgcgacca tgtggacaaa caaaatgaag ctcggcgtca tcgcggagac
     6181 gcgctatctt gcgcaaaata tgcctgaagc ggcgatcgcg gtattgcacg cccgcggcta
     6241 cgcggtggat ttgatcagtc cggatggcgg tcacctcgcg gtggatagcg gggtatttac
     6301 agacgccaat ggccagcgct tccggctgcg cgactacgac gttgtcgtat cccggaatcg
     6361 caatgctttg ggccttgtgt tgttgcgcta cgcggaggcg gccggcatcg cggtcatcaa
     6421 tacccacgcc gcggtgcaga gggtgcgcaa caaggccgag atggcggtgg ccttggcatt
     6481 ggcgagcgtc cgggcggccc cgacgctact tgcgggcgcc actgaaacgc tgcccgcgcc
     6541 actggacggt cgttttccag tgatcctaaa agcaacctat ggcgacaacg gccagggcct
     6601 gcgtctcgtg cgcaatcatg atgagctttc gcagctatct tggagcagcg aagtcgttat
     6661 tgttcagcag tatctgccca atgacaccta cgatctcaaa ctttatgtat gcggagcgca
     6721 tatctttgcc gtgcgcaagc cttcaccctt caatggagat ccacgcgctc cctcgatctc
     6781 gatatcaata acggcggaaa tggctgcgct tgcgcgcagg tgcggtgaag tattcggcct
     6841 tgagctctac ggcgttgact gcatcgagac cgagacggga cctgtggtca tcgaggtcaa
     6901 cgatttccca aactacaccg gaattcccgg aattggcgaa ctcgtagcgg atgagatcct
     6961 catgtgtgcc gagcagaaaa gagatcggcc atgaggattg ctttcttcat gcaaggctta
     7021 gcaggtgacc gttctgtgcc acatgtcagc acagtcatgg aacaggtgtt cggttcgctg
     7081 cgcaaagccg gggcagaggt gaatttgctg gttgccgaat ctcgggcctg ggatttggct
     7141 cacatcgagc ccaaccatga tttgtacgtg ctgaaatcga aatcgcctct cacgttgagc
     7201 cttgcgacca tattgcgtga aaaaggggca gacatcgtca acagtgtgga aagctgtcgt
     7261 ttggcgaggg acaagatcgc agccgaagtt gccctcgtca cgcgcaacct gcctgtgccc
     7321 gctacctgga ccactggaca ggggcgtttg ttgcgcccgc tcatcaacga cggtgcctta
     7381 tggctgaagc cgcgctccgg tagcaaggga cgcggcgtcg cccgcgtcat cgattcagca
     7441 gatgctgcat tcgcggaaaa tccaacggac cattatgggt tgccgcaacc gcttttcgcc
     7501 caacgcgacg tcccgagcgc cggattagat acgaaggtgt acgtcgtcgg ggagcgccac
     7561 tgggcgataa ccagaccttg gccggctcgt acggcgcaag ataaacaggg gcagcacgct
     7621 tccatcgacg cggatctgcg ggcggctgcg gttgcctgcg gtgaagcctt gggcctggaa
     7681 atctatgggg tcgatttttt gattgcgggg cgtgagcgcc acgttgtcga tatcaatgcg
     7741 tttccggggt tcaagggggt tggcgaagct gccggcgaga tcgccagcta tctgcttcga
     7801 cgcctgactg tagcagcggc gcgggcggcg tgacatcatg catctgtgct tcattctcga
     7861 gacccggaac ccgccacgac ccaaccagat cattgtggag acggcggcgc tgcttgaaaa
     7921 ccggggcgca cgcgtcagca tgatctaccc ggaacaagaa ctgtggcgtc tcgacacgct
     7981 ccgggtcgat gccgatcttt atctgctgaa gtccgacagt gaactcgccc tgagtctcgc
     8041 ccattctctg gagctgctcg gtgggcgggt cctgaacccg catgacgcct gtcgcaaggt
     8101 caaagataaa gccgtgacgg cggcgctgct gtgccaatcg ggaattccca caccgtcttc
     8161 atacgcagct ggccacccgg gacaacttga acatcatctc caaggagggg cgctgatact
     8221 caagcccaac cgtggatacc atggcgtcgg gctggcgatt gcccgggatg caagcgcgct
     8281 ggcgcgcgcg cgcgactacg ccgacgtggt atttgcgcag tcatattttg tcgatgcacg
     8341 caaggacctt aagctcttcg gtatcggaga cgaggtattt gcactacgaa aaccgttttc
     8401 tacggatagc ttcctgcaga gcggaatacc tgccgagctc gctcccgagc atgaagagat
     8461 cgcgcatcgc tgcgctaaga cgttcggtct gagccttttc ggcgtcgatc tggtggaaga
     8521 agatgggcgc gcgttcgtcg tcgacgtcaa ttacttccca ggatatcgcg gagtaccgaa
     8581 cgcagcgcag ctgctttcca gctttatatg gcaacaatgc ggtggctgat cgtgaccaag
     8641 cttgctttcc cccaacttgc tatcggcaca ttgtttcgtc ccaaactgca aaacatgtct
     8701 gtgcagccga ccatgattgc gctggtcgca gaaggttttc tgacgcgcct tggattcggc
     8761 atgatcggct ttgcgctgcc cctctatgcc ttgtcgctag ggaccagtat cgcgaaaatc
     8821 ggtctgctgt atgtgctcag caccatcgtc agtctggcga tgaagccagc catgggttgg
     8881 ctggcggatc gcgttgggcg caagcgcatc ctggtcggcg ctgtgctgct gcgctgcctc
     8941 gtcgggttgt tgttagtgtt cgcaaccctg ccctggcagt tgtttgcgat tcgcggcctc
     9001 cagggcgcaa tgaccgccgc acgcgaaccc tcaatcatgg cgctgctcgc ggagcatgga
     9061 agcaagaagc ggatggcgtc cgcctttgcg tggtatgcca ctgctcgcga tcttggacgt
     9121 tcgctggggt acggcgcggc gggactgttg atcacctatt tgggcttttg gtgggtgttt
     9181 ctgctcgcct tcgcctgttc ttgcgcggcc ctgtttacag tccttcgcta tgtcgaggaa
     9241 cgcaaaacgg cggagccgaa ggaaataatg aagcatgcgc gactgtttac cgaggagaag
     9301 ccggcggctg gcattagacc gcgattattt cgttatgccg gtttcggttt gctcgtgacg
     9361 ttgacggcag agatgatgcg tggcctgttt cctgtcgttg ccacgcaata tgctcacctg
     9421 agcgaggctg acgctggtat cgctgccagt gctgcaagca ttgccatcct catcggggga
     9481 cccctgttcg gctggttcgc ggatcgcggc aatcgcaacc ttgtgctgtc gctgcggagc
     9541 ttcgccaatg ccggttcatg cgttctctac atgttgttcc cgaacttcac cgggtttctc
     9601 acaggtcgga cgctggacga tatgggtaag gctgcgtttc gcccggcatg gggttcgatg
     9661 ttggtggaga tttcggaaca cgacgaaaag actcgcgccc agacaatggc gatcctcgac
     9721 acgacgtcgg acgtgggaga gattctggga ccaattctgg ccggcctact gatcagtgcc
     9781 ttcggcatcc ccggcatgtt ggcggtgagg atcgtcttgg ctttggtgac cgaggcgcag
     9841 gcatatatgc tctttcgaaa aatagaatga aagtagtgct gaacttcgca catgcctgcc
     9901 tgacatcttg ttactttcgg caaaggagtc ggcgatgact tggtcactga acgaggtaag
     9961 gattcctgag gcacttagtg cccactgtcg gtggcgcgcc acaccgaccc tcggaggcgg
    10021 cgtacatggc gcgcccgcct ccaaagagat ctacggcacg gtgcgcctcc aaggcaagga
    10081 tagtgtgaaa aggccttgtc gccaagccga agcgcattgc ggcatgacca gcgaactgcg
    10141 aggcagtaaa ctgtctttac ggcaagagga aaggtatttg ggatttttca tgcggtacct
    10201 tgcagttctt ttggtcgcgg tccttaagtt catcaatcct gcaaatgccg gtgatctccc
    10261 acggtacgac catatttttg tgattattgc agaaaatcac ggattcgatc agatcatcgg
    10321 caaatcatat gcgccaaaca tcaaccaact cgccgcagcc tacggcttag ccacgaatta
    10381 ctatggcatt gtgcatccga gcgaggctaa ctacatcgcc atgatcggcg gcgacacctt
    10441 tggggttcgt gacgacgatg cctggtattg ccggcgcggc caccccgatc ggcactgcgc
    10501 ctcacaacgt tcgaccgatc cttatttcga tcatacggtg accgagcgca gcctcgttga
    10561 tcaactaagg gagcgcaatc tcacgtggaa gggctattac gaaagcatcc ctgcccccgg
    10621 ctcgatggct gtctactttc cggacgcgca aaaccctgtg gccggtcagc ccaaccgact
    10681 ctacgcggcg aagcacaacg gtttcctgaa ttttaaaacg gttcagacag atccaaatct
    10741 ggcgacaaaa atcgtgagct tcgaccaact gcttgaggac ctcgccagcg ggcaggttcc
    10801 aaactacgcc catattgtgc ccaaccagtg caacaacatg cacgggctgt ccggaccgga
    10861 tgtaccggac gattgcagct cccgtaatga tgtcggacgc atagctcgtg gtgatcgggt
    10921 gatcggggag ttggtagcaa agattcaggc gtctccgatg tggtctgcac aacgccatgc
    10981 agcggttgtc atcacctggg atgaagatca tgacccccgc gagaagtccg atcctcaggg
    11041 gtgctgcggc ttcgacccgg aaagcctagc caattttgga ggaggacgca ttccaaccat
    11101 cgttattacg aatcatggac cgcgaggggt cacagactcg acgctgtata accactactc
    11161 cctattgcgt accacccagg aggccttcgg cgtcgatgaa tatttggggc acgccaagga
    11221 cgagcatctt ggcgtcaaaa ccatgacgcc cctgtttgaa gtgacaaact gatattggca
    11281 cgcgctccgt tgcgaatgca tcgacgcgcg acttcgtgcc gatcacctcg gggtggttcg
    11341 atctggcgat ccgtcatcgt tcccgcacgg ttcggtcaaa gggctgcctg ccgaaccgca
    11401 ccgcgctcgc catggtcttc agactcgtcg cagcaaccat tgcggccccg caccgatatg
    11461 atggcacggc agccgttcga ccgtatgagc gacgtcgacg gcgatcaaac tgaacggatt
    11521 gcctgcttca gaaagaccgg aagatcccaa gcgtctcgct actgcgtgca atgaatcgcg
    11581 cctgtcgacc tcgccgttga tccggacgta caaactccgt gaaggtcgaa ggtatctaca
    11641 tggtcgcttc cgctatagct ctacggccgc atggtctttg ctgcgatggg cggacttctt
    11701 gaagacgacg agcagcggaa tgatggcgag cgttgctatc atcagcagct tgtaatcgtc
    11761 gatgtaggcg atgatctgcg cctgctgcgt aatcatggcg tcgagcgccg cgcgcccggc
    11821 agcgccgacg ggattccaaa actgagcaat gctcgggttc tcgaatgctc gattcacggc
    11881 gctgacatgc acggcaatct cggcgtgatt cacctgcgta ttgctggtca aaagcgcatt
    11941 cacgaccgaa atgccgacac tcgagccgat attgcgcgca agattgtaga gacccgcgcc
    12001 ttccgtgcgc tctgccggcg ccagtgttgc caaagtcacc gaactcagcg gcacgaagag
    12061 aaagccgagc ccagcgcctt ggaccatgcc aacagcaacg atctcagcct gcgatacg
//
LOCUS       DATILV010000980         6082 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2288754, whole genome shotgun sequence.
ACCESSION   DATILV010000980 DATILV010000000
VERSION     DATILV010000980.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6082
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2288754"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..468
                     /locus_tag="VLJ17_23705"
     CDS             <1..468
                     /locus_tag="VLJ17_23705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26019.1"
                     /translation="RIYTDGRPWPKEIEPTFYGFSIGRWVDEDGDGRYDVLEIETRGF
                     KGPRSYEATGIPLHEDSESVIKERIYVDKSDADTLHDEITVIDHALTRPWAVDKRYKR
                     DHNPIWFQNNCSEDNRHVFIGNEHYVISGDDFLMPAKKDQAPPDLRYFKQMRK"
     gene            468..1547
                     /locus_tag="VLJ17_23710"
     CDS             468..1547
                     /locus_tag="VLJ17_23710"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018458313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016703 - oxidoreductase activity, acting
                     on single donors with incorporation of molecular oxygen,
                     incorporation of one atom of oxygen (internal
                     monooxygenases or internal mixed function oxidases)
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HSV26020.1"
                     /translation="MWPDSRLIDLFEIEHPIILAPMAGAMDAELVAEVSEAGGLGSLP
                     CAMLTPAQLRDQFAKIRTRTGKPINVNFFCHTAPVLNNAREARWRDRLKLYYQELGID
                     PSTPVPTSNRAPFDQAFCDVIEDLKPQVVSFHFGLPAPDLLRRVKSVGCRVISSATTV
                     KEAIWLEQHGVDAVIAQGFEAGGHRGMFLTDEIAAQVGTFALVPQIADNVRVPLIAAG
                     GIGDARGIAAAFALGACGVQIGTAYLHCPEAKISASHRAALQSARDDATALTNLMTGR
                     PARGFINRIMREVGPISDVAPEFPLAAGALAPLRAKAEAVGSGDFSPMWSGQAAALGR
                     EIAARELTKKLAVEAQHRLQRLGAP"
     gene            1738..2118
                     /locus_tag="VLJ17_23715"
     CDS             1738..2118
                     /locus_tag="VLJ17_23715"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HSV26021.1"
                     /translation="MRSGLTSIFIAAALTATGGATLAHHSFAMFDQEHPIELAGTVVE
                     FRYTSPHSFILVDVKGKDGASTVWNLEGPSPSILARDGMSAKTLKPGDELVLTIDPLR
                     SGAPGGAWALIKTKFKDGRPIAGQ"
     gene            2149..3783
                     /locus_tag="VLJ17_23720"
     CDS             2149..3783
                     /locus_tag="VLJ17_23720"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HSV26022.1"
                     /translation="MTLKTLTRYLAASVAFSALAVAAQAADNRGVVQGIVNDAAGQPL
                     AGAMVKLINADRRLTFMVVSQDQGRFEANDLPPGQYTVQGVGAGFESNKSAPTNVEGG
                     KSAKVDLTLANKQGAMLAPAWPHRIPEEQVKNASLDLPAGDGQSLVNERCTTCHDARR
                     IVVKRTTLPEWEHIIDRMRGVMAIQNIPDVSNQEAATIANYLTSSFKPEQPYDANSRL
                     PRELLTGKATKYRAVTYDLVNHYAEPHDVASDPQGNAWVAERAGKLGRFDPRTYEFVE
                     VTPPPGPAAANRQRLGNPQIDKNGILWVADGPNGRWLSYDTKYDKFASFQWPKGHGNA
                     GGNSMAVHPDGTIYATGLGKEVRALNPEKVEFKFYQSPSAGGKQEPGAYGLAVAGDGS
                     VWWAEDNIDKMGRIDPATGKVDEYTIPYSEGHAFPRRMNSDANGDLWVALWQAGKLMK
                     IDHKTREMKIFSPPTANAGAYSVVVDKKNDLIWMSEHKVDKIARFNPKNEEWVEFPLP
                     EAQSDPRRIDIDPNNPNRVYFSGNTAGRVGFVEVLR"
     gene            4146..4832
                     /locus_tag="VLJ17_23725"
     CDS             4146..4832
                     /locus_tag="VLJ17_23725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26023.1"
                     /translation="MRYFNSRAFRREQPSDPQLMLQIISDAIAMHTPIQFVLYWGKGP
                     RCTISSHDIECLDFLASFATRVRENFEPGANIKLIFTDTHAELNGYPPLGIRRYFGDV
                     RICALKRGFDSCWLSELTRIAEPVVGPIDGELPQELAGRLVASAKKWYRGEGTAEDAA
                     RKYYRLNMLELRAVELAYPRSIFVTYNSPDFRALCPRRLPVFYMYTLRRGCRIKPWFL
                     PAPTRPMDAP"
     gene            4985..>6082
                     /locus_tag="VLJ17_23730"
     CDS             4985..>6082
                     /locus_tag="VLJ17_23730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HSV26024.1"
                     /translation="MTFHITKVPSLITERRGSAILGALIIVMLWMGIGLKYIEDVQSD
                     RKEAERANHNFAIVFEENVLRSIGEIDKALLYLRRSVETRKDSTSLMTIANTTDVLSE
                     IIVQVAIIDAHGIARASNARRDPFVPIDVSDRDHFRFHLTNTDDQLYISQPVIGRASG
                     KWSIQFTRSIHNNDGSFAGVVVASLDPRHLTKFYDKIDFGLSASISLIGSDGMVRSSG
                     GSAGGFAMSQDITGTTLFDRMKAGANATFESADSEDGLVRLDTIRKVRGHALWVSVRV
                     NKADTFAGSLATLKLNAAVGAVLTLIVLGAMERILKTEAKARQKADQLRLTLEHMSQG
                     IMLVTKNLQIPVINSRCGELLDLPPDFIAHPP"
BASE COUNT         1343 a         1715 c         1781 g         1243 t
ORIGIN      
        1 cgcatctaca cggatggacg tccctggccg aaagaaatcg aaccgacctt ttatggtttt
       61 tccattggca gatgggtcga tgaggatggc gacggccgtt atgacgttct agaaatcgag
      121 acgcgcggtt tcaaaggacc gcgctcgtac gaggctaccg gcattccact ccatgaggac
      181 agcgagtccg tcatcaagga acgcatctac gtcgacaaat ccgatgccga tactctgcat
      241 gacgaaatca ccgtcatcga ccatgcattg acgcgcccct gggcggttga taagcgctac
      301 aagcgtgacc acaatccgat ctggttccag aacaattgct ccgaggacaa ccgccacgtc
      361 ttcatcggca acgaacacta tgtcatcagc ggcgacgatt ttctgatgcc cgccaagaag
      421 gatcaggcgc caccggattt gaggtacttt aagcagatgc ggaagtgatg tggccggata
      481 gccgcctgat tgacctattt gaaatcgaac atcctattat cctggccccg atggcgggag
      541 ccatggacgc cgaattggtg gcggaagtat cggaggctgg aggcctcggt tcgctgccct
      601 gcgccatgtt gacaccggca caactgcgcg accagttcgc caaaatccgc acccgaaccg
      661 gcaaaccgat caacgtgaat tttttctgtc acaccgcgcc ggtcctcaac aatgcgcgcg
      721 aggcgcgttg gcgtgacagg ctgaagctct attaccagga gcttgggatc gatccgtcaa
      781 ctccggtgcc gaccagtaat cgggcgccct tcgaccaggc attctgcgac gtgatcgagg
      841 acctcaagcc gcaggtcgtc agttttcact tcggtcttcc tgcccccgac ctgcttcgac
      901 gcgtcaaatc cgttggttgc cgtgtcatca gttcagcgac caccgtgaag gaagccattt
      961 ggcttgagca acacggcgtc gatgctgtga tcgcgcaggg ctttgaggcc ggcggccatc
     1021 gggggatgtt tctcaccgac gagatcgccg cacaggtcgg cacgtttgcg ctggttccac
     1081 aaatcgccga caacgtgaga gtgccactga ttgcagcagg cggcatcggc gacgcccggg
     1141 gcatcgcggc ggcattcgcg ttgggcgctt gcggcgtgca gatcggcacc gcgtatttgc
     1201 attgtcccga ggcgaaaatc tcggcgtcac accgcgccgc gttacaatcg gcgcgcgacg
     1261 acgccaccgc actcactaat cttatgacgg ggcggccggc ccggggtttc atcaaccgca
     1321 tcatgcgcga agttgggccg atcagcgatg tcgcgccgga gtttccgctt gcggcgggcg
     1381 cgctggcacc gttgcgtgca aaggccgagg ccgtcggatc tggagacttc tcaccgatgt
     1441 ggtcagggca ggccgcagca cttggccgtg agatcgcggc cagagaactg acgaagaaac
     1501 tagcggttga ggcgcaacat cggttgcagc gtcttggggc gccgtagcaa cgcagacacg
     1561 ttggtgcgga tgcatgcatt gaggctttcc cgtccgctcc ccccttctcg cacacccacg
     1621 cgtggtatag attttctcca gtcggccgga cgtccggaat tcgtttggtg tttgcaccga
     1681 cgcagtgtcg gtctcctccg gttttactgg aatacgagaa ccaatgaggg gaagcgcatg
     1741 agatcaggat tgacgtcgat attcattgca gcagcactga ccgctacagg cggggcaacg
     1801 ttggcacatc attcatttgc gatgtttgat caggagcatc cgatagaact cgccggaacc
     1861 gttgtggagt tcagatatac gagtccgcac agctttatcc tggtcgacgt caaggggaag
     1921 gatggagcca gcacggtgtg gaacctggaa ggcccctctc cgagcatcct cgcccgagac
     1981 ggcatgtctg ccaaaactct gaagcccggc gacgagttag tgctgacgat cgatccgttg
     2041 cgcagcggcg ctcccggcgg cgcgtgggcg ttgataaaga ccaaattcaa ggacggcagg
     2101 ccgatcgccg gccaataaga aactgcaata tccacgagga ggagactcat gacattaaag
     2161 actttgacgc gatatctggc tgccagcgtc gcttttagtg cccttgcggt ggccgcccag
     2221 gccgccgata accgcggcgt cgtgcagggt attgtcaacg acgccgctgg acagccgctc
     2281 gccggcgcca tggtgaagct catcaatgca gaccggcggc tgaccttcat ggtggtgagc
     2341 caggaccagg gccgctttga ggcgaatgat ctaccgcccg gccaatatac ggttcagggg
     2401 gtcggggccg gtttcgaaag caacaaatcg gcgcccacga acgtcgaggg tggcaagagc
     2461 gctaaggtcg acctgacgct tgccaacaag cagggcgcga tgctggcgcc cgcgtggcct
     2521 caccgcatcc cggaagagca ggtcaagaac gcttcgctcg atttgccggc cggcgacggg
     2581 caatcgcttg tcaacgagcg ttgcaccact tgccatgatg ctcggcgcat cgtcgtcaag
     2641 cgcaccacgc tgccggaatg ggaacacatc attgatcgta tgcgcggcgt catggcgatt
     2701 cagaacatcc ccgatgtctc caaccaggaa gcggcaacga ttgcgaatta cctgacttcc
     2761 agtttcaagc ctgagcagcc ctacgatgcc aacagccggt tgccgcggga attgctaacc
     2821 ggcaaggcta cgaaataccg tgccgttacg tatgatctcg tcaaccacta tgccgagccg
     2881 cacgatgttg cttccgatcc gcaaggaaat gcctgggtgg cggagcgcgc cggcaaactc
     2941 gggcgctttg atcctaggac ctatgagttt gtcgaggtca cgcctccgcc tggaccggcc
     3001 gccgcgaacc gtcaacggct cggcaatcct cagatcgaca agaacggcat cttgtgggtg
     3061 gcggacggcc ccaacggacg ctggctgagc tacgacacca aatacgacaa gttcgccagc
     3121 ttccagtggc ccaagggcca tggcaatgcc ggcggcaaca gcatggcggt gcatcccgac
     3181 ggcaccatct acgcgaccgg tctcggcaag gaggtgcgtg cgctgaatcc tgaaaaagta
     3241 gaattcaaat tctatcaatc tccaagtgcc ggcggcaaac aggagcccgg cgcctatggt
     3301 ctcgcggttg ccggcgacgg atcggtgtgg tgggccgagg acaacatcga caagatgggg
     3361 cggatcgatc cagccaccgg taaagtcgac gagtacacga ttccctacag cgaggggcac
     3421 gccttcccgc gtcgcatgaa cagcgacgct aatggcgacc tgtgggtggc tctgtggcag
     3481 gccggcaagc tcatgaagat cgaccacaag accagggaaa tgaagatctt ctcgccgccg
     3541 accgccaacg ccggcgccta ttcggtggtg gtggataaaa agaatgacct catctggatg
     3601 agcgagcaca aggtcgacaa gatcgcccgg ttcaatccca agaacgagga atgggtggag
     3661 ttcccgctgc cggaggcgca gtccgatcca cgccgcatcg acatcgatcc gaacaatccg
     3721 aaccgggtct attttagcgg caacaccgcg ggccgcgtcg gcttcgtgga agtgctgcgg
     3781 taatcagatc ggccgactca ccaagtccgg gtcaaatcgc aggttgatat gacccggacg
     3841 cgacttttgc gggtgaccgc gtacgtgacc atgcgttgga gacggtgcga taccttgttg
     3901 caaaggtgaa agctcatctc ggcagcgcgg gatattaacc ctaatgaata ttattccacc
     3961 ttgacgtctg aagtcattca tcagtatgaa taaaaagtaa atttgggcag tgctcaatga
     4021 caagtttaga tacgcggtcg gcgatgcggg tcgatacggt atcgtattgt ccttctcggg
     4081 acatcggcaa taatctggcg aaagctatga ttgatccgca tcaaaaagct acacctgaaa
     4141 aaatcatgag gtattttaat agtcgagcgt tcaggcgcga gcagccgagc gatccgcagt
     4201 tgatgctgca gatcatatcc gatgcgatcg caatgcacac gcctatacaa tttgtcctat
     4261 attggggcaa aggtccgcgc tgcaccatta gtagccacga tatcgaatgc ctcgattttc
     4321 ttgcgtcgtt tgcaacgcgc gtgcgcgaga atttcgagcc gggtgcaaat ataaaattga
     4381 tttttacaga tactcatgcg gagctcaacg gctatccgcc gctcggtatc cgtcgctatt
     4441 ttggagatgt tagaatctgt gccctcaagc gcggcttcga ttcatgctgg ctgagcgaat
     4501 tgacgcgtat cgcggagccg gtggtgggcc caatcgacgg cgagttgcca caggaattgg
     4561 cagggcgact agtggcaagc gccaagaaat ggtatcgcgg cgaaggaacg gccgaggacg
     4621 ccgcgcgcaa atattatcgg ctgaatatgc tcgaattgcg ggcggtggaa cttgcctatc
     4681 cgcggtcgat cttcgttaca tataatagtc ctgatttccg cgccttgtgc cctcggcggc
     4741 ttccggtgtt ctacatgtat accttgcggc gcgggtgcag gataaagccg tggtttctcc
     4801 cggcgccgac acgacctatg gacgcgccat agcgataaat aggcagattc tgatttaatc
     4861 atagcgcttt ttgtcgcttt atttgcatta tattaaccaa tagccgttgc aatcatagta
     4921 ggttaagcag accgaaactc ggcacacgca aggtcggcgc aaatcccttg atgaatccgt
     4981 gccaatgacg tttcatatca caaaggtgcc gagtctgatt accgagcggc gaggttccgc
     5041 cattctcggc gcgctcatca ttgtcatgtt gtggatgggg atcggtctca aatacattga
     5101 agacgtccag agcgatcgca aggaagccga acgagcgaac cataattttg caatcgtatt
     5161 cgaggagaac gtgcttcggt cgatcggcga aatagataaa gctctgctct atttgcggcg
     5221 gagcgtcgag acccgaaaag actcgacgag ccttatgacg attgcaaata ccacggatgt
     5281 attgagcgaa atcatcgttc aggttgccat tatcgacgcc catggcatcg cacgggcctc
     5341 gaacgcccgt cgtgacccct tcgtccccat tgacgtgagc gaccgcgacc acttccgctt
     5401 ccacctcacc aacaccgacg atcagttgta tattagccag cctgtgattg gtcgcgcctc
     5461 tgggaagtgg tcaattcagt tcacgcgaag cattcacaac aacgacggga gtttcgccgg
     5521 tgtcgtcgtg gcttcgctcg acccgcggca cttgaccaaa ttctatgaca agatcgattt
     5581 cggcctgtcg gcgtcgatct cgttgatcgg cagcgatggc atggtccgtt cgagtggcgg
     5641 cagcgccggc ggatttgcga tgtcgcagga catcaccggg actacgttgt ttgatcgtat
     5701 gaaggcgggc gccaatgcaa cttttgagtc cgccgattcg gaggacggac tagtccgcct
     5761 cgacaccatc cgcaaagtca gggggcacgc gctttgggtt agtgtaagag tcaacaaggc
     5821 cgacacgttc gccggttctc tagctacact caagctgaat gcggccgtcg gcgccgtgct
     5881 gactttgatc gtgctcggtg ccatggaacg gattttaaaa accgaagcta aggccaggca
     5941 gaaggccgat caacttcggc tgacgcttga gcacatgagc cagggcatca tgttggtcac
     6001 caagaatctg cagattccgg tcatcaacag cagatgcggc gagcttctgg atttgccccc
     6061 cgacttcatt gcgcatccgc cg
//
LOCUS       DATILV010000981         3871 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4087193, whole genome shotgun sequence.
ACCESSION   DATILV010000981 DATILV010000000
VERSION     DATILV010000981.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3871)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3871)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3871
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4087193"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(172..1614)
                     /gene="ntrC"
                     /locus_tag="VLJ17_23735"
     CDS             complement(172..1614)
                     /gene="ntrC"
                     /locus_tag="VLJ17_23735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulation protein NR(I)"
                     /protein_id="HSV26025.1"
                     /translation="MPAGSILIADDDAAIRTVLNQALSRAGYEVRSTGNAATLWRWVS
                     HGEGDLVITDVVMPDENAFDLLPRIKKLRPDLPIIVMSAQNTFMTAIRASERGAYEYL
                     PKPFDLKELTAIVGRALSEPKDRPTVAVGKPEEIDIPLIGRSPAMQEIYRLLARLMQT
                     DLTVLISGESGTGKELVARALHDYGKRRSGPFVAINMAAIPRELIESELFGHEKGAFT
                     GANTRNAGRFEQAEGGTLFLDEIGDMPMEAQTRLLRVLQQGEYTTVGGRTPIKTDVRI
                     VAATNRDLRILIQQGLFREDLYFRLNVVPLRLPPLRERAEDIPDLIRHFFALAEREGL
                     PNKQIETAAIERLKRYRWPGNVRELENLARRLAALYPQEIITTAVIDNELAPPAPAPL
                     GEESRTEEHLSIAVERHLNKYFSGFGDSLPPPGLYHRILREIEYPLLSAALAATRGNQ
                     IRAADLLGVNRNTLRKKIRDLEIQVIRTSG"
     gene            complement(1625..2752)
                     /locus_tag="VLJ17_23740"
     CDS             complement(1625..2752)
                     /locus_tag="VLJ17_23740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSV26026.1"
                     /translation="MVGSRNSSHAIGPAEAVLNALPLAVIVIAPDGMINDANVAAEDF
                     FDMSVALLRRHALRDLVPFGSPLLSLIEQVRQRGGAVNEYKVDLGTPRTPSERLVDLH
                     VAPVPERPGQVVVMLQQRTMADKMNRQLTHRGAARSVIALAAMLAHEIKNPLSGIRGA
                     AQLLEQQAGDDDRILTRLICDEADRIVKLVDRMEVFGDERPVEREQVNIHMVFDHVRR
                     IAQSGFARHIKFVEEYDPSLPPVLANRDQLVQVFLNLVKNAAEAIGEIAADGEIQLST
                     AFRPGVRLSLPGSKSKVSLPLEFCIKDNGPGVLDDLMPNLFDPFVTTKPTGSGLGLAL
                     AAKIIGDHGGIIECESQPRRTIFRVLMPKFTGDDAEPGGET"
     gene            complement(2758..3807)
                     /gene="dusB"
                     /locus_tag="VLJ17_23745"
     CDS             complement(2758..3807)
                     /gene="dusB"
                     /locus_tag="VLJ17_23745"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HSV26027.1"
                     /translation="MSDSKFTWFAGPLVVGAVTVANPVFLAPMSGVTDAPFRRLVARL
                     GAGLVVSEMTACAALAAGKRDARLRIEAAGNSCHVVQIAGCEAKWMAEGARIVADGGA
                     AIIDINMGCPARHVTNGWSGSALMRDLDHAISLVDATVAAAPLPVTLKMRLGWDEHSI
                     NAPELARRAEASGVKLITVHGRTRCQFYKGSADWTAVRAVKQAVSIPVVINGDILTCR
                     DAEAALAHSGADAVMIGRGAEGRPWFPGQVARYLAGGPPEPPPVVSTQFEIIRALYDE
                     MLGHHGERIGVKHARKHVGWALDAAAATAGAPRETLKALRARVLTAMSPRETQCRLAE
                     AFDALCSERFDRRAA"
BASE COUNT          747 a         1171 c         1188 g          765 t
ORIGIN      
        1 agcaaatatg ctctggcgtc accaggaccg gtggccccat ttggcgtatc gagcaacgtg
       61 atataaatta catatgatgc acaaatacaa caatggtgct caaaagcgac atttccgcgg
      121 cgagtacaac ggattcaagg ctcgtttgac tattttttag gcaccctact ctcatccgct
      181 cgtgcgaatc acttggattt ctagatcccg aatttttttg cgcaacgtat tgcggttgac
      241 gcccaacaaa tcggcagcgc ggatttggtt gccacgggtg gcggcaagcg cggcggatag
      301 cagaggatat tcgatctctc tgaggatccg atggtatagg ccgggcggcg gaaggctgtc
      361 gccaaaaccg ctgaagtact tattgaggtg gcgctcgacc gcgatcgaca ggtgctcttc
      421 ggtgcggctt tcctcaccca gcggcgccgg cgcgggtggc gcgagctcgt tgtcgatgac
      481 tgcggtggta atgatctcct gcgggtacaa cgcggcaagg cggcgggcga gattttccag
      541 ctcccgcaca ttgccgggcc agcggtagcg cttgagccgt tcgatcgctg cggtctcgat
      601 ctgcttgttg ggcaggccct cacgctcggc aagcgcaaag aaatgacgga tgaggtcagg
      661 gatatcctcg gcacgctccc gcagtggcgg caaccgcagc ggcaccacgt tgagccgaaa
      721 atacaggtcc tcgcggaaca ggccctgttg tatcaggatg cgcaaatccc tgttggtggc
      781 tgcgacaatt cgcacatctg tcttgatcgg cgtgcggccg ccgaccgttg tgtactcacc
      841 ctgctggagc acgcgcagca ggcgagtttg cgcctccatg ggcatatcgc cgatctcatc
      901 gaggaacaag gtgccacctt ccgcctgctc gaaccgcccg gcattgcgtg tattggctcc
      961 cgtaaaggcc cctttctcgt ggccgaatag ttcggactcg atgagttcgc gcgggattgc
     1021 cgccatgtta atggcgacga aaggtccgga acgccgcttg ccgtaatcat gcagcgcacg
     1081 cgccaccaat tccttgccgg tgcccgattc tccagagatc aacaccgtga ggtcggtttg
     1141 catcagccga gccaacagac gataaatttc ctgcatggcg ggtgaacggc cgatcaacgg
     1201 gatgtcgatc tcctcgggtt tgcccaccgc cacggtaggg cggtctttcg gctccgacag
     1261 cgcacggccg acgatggcgg tcagttcctt aagatcgaac ggcttcggca gatattcata
     1321 ggcgccgcgc tcggaggcgc ggatggccgt catgaacgtg ttctgggcac tcatgacgat
     1381 gatcggcaga tcgggtcgca gcttcttgat gcgcggcaag agatcgaagg cgttctcgtc
     1441 gggcatgacc acgtcggtga tgacgaggtc gccctcgcca tggctgaccc atcgccaaag
     1501 agtggcagca tttccggtcg agcgcacttc gtatccggcg cgcgacaggg cttggttgag
     1561 cacggttcgg attgcagcgt cgtcatcggc tatcaaaatg ctaccagcag gcattggcat
     1621 cacctcaggt ttctccgccc ggctcggcgt cgtcacccgt gaacttgggc ataagcacgc
     1681 gaaagattgt ccgccgcggt tgcgactcac attcaataat gccgccatga tcgccgatga
     1741 ttttcgcggc aagtgcaaga ccaagtccgc tgcctgtcgg cttggtcgtg acaaaaggat
     1801 cgaaaagatt cggcatcaag tcgtccaaca cgcctgggcc gttgtctttg atgcaaaatt
     1861 cgagcggtaa tgagaccttt gatttgctgc ccgggagcga caggcgcaca ccgggcctga
     1921 aggcggtgga gagctggatt tcgccatcag cggcgatctc gccgatcgcc tcggcggcgt
     1981 tcttgacgag gttgaggaac acctggacga gctggtcgcg attggcaagc accggtggca
     2041 gcgaaggatc atattcttcg acaaacttga tgtgtcgggc aaagccggac tgggcaattc
     2101 gcctcacgtg atcgaaaacc atgtggatat tgacctgctc gcgttctacc gggcgctcgt
     2161 caccgaacac ctccatgcgg tcgaccaact taacgatgcg gtcggcctca tcgcagatca
     2221 gcctggtcaa gatgcgatcg tcatcgcccg cttgctgctc caagagctgc gcggcgccgc
     2281 gaatgcccga cagcgggttc ttgatctcgt gggccagcat ggcggcgagc gcgatcacgg
     2341 accgcgcggc gccgcgatgg gtcagttgtc ggttcatctt gtcggccatg gtgcgttgct
     2401 ggagcatcac cacaacctga ccgggacgtt ccggcaccgg agccacatga aggtcgacca
     2461 gacgttccga cggcgtgcgc ggcgtgccga gatcgacttt gtattcattg acggcaccgc
     2521 cgcgctggcg gacctgctcg atcagcgaca gcaatgggct gccgaacggt accaaatcgc
     2581 gtaaggcatg ccggcgcagc agcgcaaccg acatatcgaa aaaatcctcc gctgccacgt
     2641 tggcgtcgtt gatcatgccg tcaggagcga tcacgattac ggcgagcggc agcgcattga
     2701 gtacggcttc cgcagggcca atggcgtgag aggagttgcg gctcccgacc atgctcatta
     2761 agccgccctc cgatcgaacc gctcagagca caaggcatcg aatgcctcgg caagccggca
     2821 ctgcgtttcg cgcgggctca tcgcggtgag cacgcgtgcg cgcagggcct ttaaggtttc
     2881 acgtggggcg ccggcggtcg cggcggcggc gtcgagcgcc catccgacat gcttgcgggc
     2941 atgtttcacg ccgattcgct cgccatgatg gccgagcatt tcatcataaa gcgccctgat
     3001 gatctcaaac tgtgtggaca ccaccggtgg cggctctggt ggcccaccgg cgaggtagcg
     3061 cgcgacttgt ccgggaaacc atggtcggcc ttcggctccg cgaccgatca tgacggcgtc
     3121 cgccccagag tgcgcaagtg ccgcctcggc gtcacggcaa gtcaggatgt caccgttgat
     3181 cacgactggg atcgacaccg cctgcttgac ggcacgcacc gcagtccaat cggcgctccc
     3241 cttgtagaat tggcagcgtg tgcgaccgtg aactgtgatg agctttacgc ctgatgcctc
     3301 ggcgcggcgc gccaattctg gcgcattgat ggagtgctcg tcccaaccga gccgcatctt
     3361 gagagttacc ggcagcggtg cagccgcgac cgttgcgtcg accagactta tcgcatggtc
     3421 gagatcgcgc atcagtgctg atcccgacca gccattggtg acgtgccgcg ccgggcagcc
     3481 catattgata tcgatgatgg ccgcgccgcc atccgccacg atgcgggcgc cctccgccat
     3541 ccattttgcc tcgcagccgg cgatctgtac gacgtggcag ctattgcccg ccgcttcgat
     3601 gcgtaacctc gcatcgcgct tgcccgccgc aagggcggcg caggcggtca tctcggacac
     3661 gaccagtccg gcgcccaaac gggccaccag tcgacggaac ggggcgtcag tgacaccgga
     3721 cataggcgcc aggaataccg ggttcgcaac ggtcaccgcg cccacaacaa gtggaccggc
     3781 aaaccatgtg aatttggaat cgctcattag cttgcctata ttctaggcga acacgtcgtc
     3841 tgcatatagt ttagccattc cggcattgcg a
//
LOCUS       DATILV010000982         4654 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1269535, whole genome shotgun sequence.
ACCESSION   DATILV010000982 DATILV010000000
VERSION     DATILV010000982.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4654)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4654)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4654
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1269535"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(504..1484)
                     /locus_tag="VLJ17_23750"
     CDS             complement(504..1484)
                     /locus_tag="VLJ17_23750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSV26028.1"
                     /translation="MPKPPRRQFLHLAAGAAALATLSRIARAQAYPTQPLRWIIGFPP
                     GGGADIVARIVGPWLSERLGQPVIIENRPGASTNIAVQAVVNSPPDGYTLLFLGASAV
                     VNTSLFESLPFNLQRDIAPVSGLIDFPMVMVAHPSVPAKTVAELIAYAKANPRKISMA
                     SFGTGSASHLAGELFKMMAGVDMVHVPYRGGAPMIIDLVGGQVQVGFDVMATSLPHIR
                     TGALRALGVAGTKRFDMVPDVPTIAETLPGYEARTWAGVGVPRGTPPEIIARLNRDIN
                     AGLANPTIRARLAEVGTIPMILTAAEFGAHVATESEKWAKVVKSAGIKPE"
     gene            2222..3091
                     /locus_tag="VLJ17_23755"
     CDS             2222..3091
                     /locus_tag="VLJ17_23755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HSV26029.1"
                     /translation="MTGGDELRIVRRVYAKQIAHAARADNPRIEEALAELRREDFLSP
                     GPWQLMRFPGGYQQTPDDDPIYLYQDTPVAILPDKRLNNGQPSFLIFLVSVGGLSDGE
                     RAVHIGTGTGYYTAVISRLAGVNGRVLGVELEPELASRAKVNLARFANVDVIHGDGAM
                     VALEPADVIYVNAGASRPAETWLDALKPGGRMVLPLTVSHTEQGHPMTRGAIFLITRP
                     VDNAADHYAARCISNTLIYPCVGVRDEASETALVAAFENGNAGRVARLYRTDTIPEER
                     CWLRAPGWSLTYE"
     gene            3572..>4654
                     /locus_tag="VLJ17_23760"
     CDS             3572..>4654
                     /locus_tag="VLJ17_23760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26030.1"
                     /translation="MTINHAPATAAPSRCEQVLSGFGTRLLDAKCTESADLTTANPAT
                     TPANNAIATLPAFAFTPQTDRDTIAPDPPHRTPIAGPVPGLQIEARIAEDPLGQARVL
                     IRLPDDWNGRLVVAGAAGTRSEFNGDFAWSDYVVQKGYAYVSQNKGVLNFMVSNAADP
                     TACRLNPSSTTFVHFYDDDPGMPFTRWVTFMAEAARLGRAGVQMHYGRDARYTYAVGT
                     SNGGYQVRRAVESHPELFDGGIDWEGTFVAADIPNLLSTLPPAILNYPDYVAAGFNPN
                     STAARNILAAGYPPDVTTTKDGTTVSLWGLHYLQFWEVTMCQWQKRLDPGYNTYSAGL
                     GNYVYLNRVSASNVADNLAAFRTTGRI"
BASE COUNT          894 a         1451 c         1421 g          888 t
ORIGIN      
        1 gagacggcgg ctttcaacat attcctctac ggccgcatga tcggcgccgc cgctgagatc
       61 gatgatcatc tcaatcgcgg ccgaaacatg gacacacgta cgccgcaaga acggtgtgcg
      121 ttcgtcgtct gaccgaagat caaaagcgaa tcgcggacgc ccggtctacg ggcggggttt
      181 tcgcaaatgc caatcatcgc tttcttcggt gtgaaatggc aggtggtaaa tccatcgggt
      241 cgtgggggat acggccgaat tcgatgatcc gctgtccctg ctcaaaactc gaaatggtgg
      301 agaaattcca ggatttcttt ggccttcgga gtgttgagca gggacacgta acgctgaggc
      361 gtggcgcagc gatgcgcgcc ggcttccttg ccgggatgta gcccttgctg gtcacgccct
      421 ccaaggttca cgtcacgccg gcggtagcct ggttgatcga catggcagct ctctgacggc
      481 ctgtgccatc gttgatgccc ggctcactcc ggcttgatgc cggcggactt caccaccttg
      541 gcccatttct cggattcggt tgctacatga gctccgaact ccgcggcggt caggatcatt
      601 gggattgtgc cgacttcggc gagccgcgcc cgaatggtcg ggttcgccag tcctgcatta
      661 atgtcgcggt tgagccgagc gatgatttcc ggtggcgtgc cccttggcac gccgaccccg
      721 gcccatgtcc ttgcctcgta tcccggaagt gtctcggcga tggtcggcac gtccggcacc
      781 atgtcaaatc gcttggtgcc cgccacgccg agcgcccgca gcgcgccggt gcggatgtgc
      841 ggtagtgatg tcgccatcac atcgaagccg acctgcacct ggccgccgac gagatcgatt
      901 atcatgggcg caccgccgcg ataggggacg tgcaccatgt cgacgccggc catcatcttg
      961 aacagttcgc ctgccaagtg agatgccgag ccggttccaa acgaggccat gctgatcttg
     1021 cgcggattgg ccttggcgta ggcgatgagt tcggcaacgg tcttggccgg aaccgatggg
     1081 tgcgcgacca tcaccatggg gaaatcgata agtccggaca ccggtgcaat atcccgctgc
     1141 aagttgaatg gaaggctctc aaacagactc gtgttgacga cggcggaagc cccaaggaac
     1201 agcagcgtgt acccgtcggg cggcgaattg accacagctt ggaccgcaat gttcgtactg
     1261 gcgcccggcc ggttttcgat gataaccggc tgaccgagcc gctccgacaa ccacggtccc
     1321 acgatccgag ccacgatgtc agcgccgccg cctggcggaa aacctatgat ccagcgcaac
     1381 ggttgcgtcg gataggcctg cgctcttgcg atccgcgata aagtcgcaag agcggcagca
     1441 cccgctgcca gatgcagaaa ttggcgacgc ggaggtttcg gcatggtccc ctccatggaa
     1501 aatgcggaag ttcggcacgt ctcgccagca gctcgcgaac taactctatg cgcgcgcgca
     1561 ccatgcaacc ttaccagatc gtcgacgagc acgaggtgtt attcaacgca ctcttcttga
     1621 gactcggtgg cgcgggctcg cggcgccgct gtccctgctc aaaactcgga atggtggagg
     1681 aattccagga tttctttggc cttcggagtt ttgagcaggg acaggtcatt ctatcgacag
     1741 ggtcatcgta gaccccgacg aatttctctc atggtgtcaa gcaaacagac gcggagttcg
     1801 atcgcgacgc acgcaatgcc tatgccgccg ttctcttgtc tcggcatcag cacggcggcc
     1861 agtgatatcc tcgcattgga gacgagcgga agaggccgct agcgggggtg cggggggcaa
     1921 tcgccagcga cctccacgga acgacgaacg tgggcttcgt cgctcaagcc caacgacggt
     1981 ttggaaccca aaatgttccc gctgccgagc cgtattttca cataatttac gtgaccctgc
     2041 cctcggatgc gggcgtcatg cacgcacggc gcgccgatgg cgctcgtgct gctgatgatc
     2101 cggtagggcg cggacgcctc cagcgatgtg ctgcggcgct cggtgcgctc aggtgcggaa
     2161 cgatgtgctg ttgccctaat cacggccgga gacaccgaaa tcacaggcgg aaacaccaac
     2221 aatgacggga ggagacgagc tcaggatcgt tcgtcgcgtc tacgcgaagc agatcgcgca
     2281 tgccgcacgt gccgacaatc ctcgcatcga ggaggcgttg gcagagttgc gcagggaaga
     2341 ttttctgtcg ccaggcccgt ggcaattgat gcgctttccc ggcggctacc aacaaacgcc
     2401 cgacgacgac ccgatctatc tctatcagga cactccggtc gccattctgc cggacaagcg
     2461 gctcaacaac ggccagccct cgttcctgat cttcctcgtt tccgtcggcg ggttgtcgga
     2521 cggcgagcgt gccgtccaca tcggcaccgg caccgggtac tacacagccg tcataagccg
     2581 tctggccggg gtcaatggcc gggtgctcgg ggtcgagctc gagcccgaac tcgcatctcg
     2641 tgcgaaggtc aatctcgcca ggtttgcgaa tgtcgacgtg atccacggcg acggcgcgat
     2701 ggtggcgctc gaaccggccg acgttatcta tgtgaatgca ggtgcctcgc gtcccgcaga
     2761 gacttggctc gacgccttga agccaggcgg ccgcatggtt ctcccgctga ccgtcagcca
     2821 taccgaacaa ggacatccga tgacccgagg cgcgatcttt ctgatcacac gcccggtcga
     2881 caacgccgcc gaccactatg cagcccgctg tatatcaaac accctgattt atccttgcgt
     2941 gggcgtacgg gatgaagcgt ccgaaacggc gcttgttgcc gccttcgaga acggcaacgc
     3001 cggcagggtg gcgaggctat accggaccga cactattccg gaggaacgtt gctggctgcg
     3061 cgcaccgggt tggagcctga catacgaata gcgcgatctc cgcacggtag gcgacagggc
     3121 gctgccgacg atgtccgcac caaagctcgc gacatcgatc ggcccgagcc gagggacagg
     3181 tgattctggt cgggcaaagc tccaggaata ggtcgcgcct ggcccgaaga cgccatcccg
     3241 ccaaagatgc cctttgggcc aaagatgccc ttctgggaga gatcattatt ttcggcgccg
     3301 cagggcatct tcccgcccgc gcgatcgttg cggccgtttt tcggatgcat ggagtgcttt
     3361 tcaagaactc gtcctggttg taaattggct aggagttgct gccagtcacg gccagccaag
     3421 cactatcgac caaaccgcat ccgtgaaacg gagccgcttg catgggagcg tcacgccgtc
     3481 gtcctggctg tcggacgggt ctctgagtgg gaggcaccac gtgtgctctt tgctccatct
     3541 ccggtgggct ggtgcagttg ctctcgcagc gatgaccatc aatcatgcgc ccgccacggc
     3601 ggcgcccagc cgatgcgagc aagtgctgtc cggcttcggg accaggctcc tcgatgcaaa
     3661 atgcaccgag agtgccgatc tcaccactgc caatccggcg acgaccccag ccaacaacgc
     3721 gattgcgaca ttgccggcgt ttgcgtttac gccgcagacc gatcgcgaca cgattgcgcc
     3781 cgatccgccc catcgcacgc cgatcgccgg gccggtgccg ggccttcaga tcgaggctcg
     3841 cattgccgag gacccactgg gccaggcgcg cgtcttgatt cgcctgcccg acgactggaa
     3901 cggcaggctc gtggtcgccg gcgcagccgg cacacgcagc gaattcaacg gcgattttgc
     3961 gtggagcgat tacgtcgtgc agaaaggcta cgcctacgtc tcgcaaaaca agggcgtgct
     4021 caattttatg gtgtcaaacg ccgcggatcc cacggcgtgc cggctcaatc cgtcatcgac
     4081 caccttcgtt cacttctacg acgacgatcc aggcatgcca ttcacgcgct gggtgacctt
     4141 catggcggag gcagcccggc tcgggcgcgc cggagtccag atgcactatg gtcgggacgc
     4201 gcgatatacc tatgcggtcg gcacctcgaa cggcggctat caggtgcgac gcgcggtgga
     4261 gtcgcatccg gagttgttcg atggcggcat cgattgggaa ggcacgttcg tagcagcgga
     4321 catcccgaac ctcttgagca ccttgccgcc ggcaatcctg aactatccgg attacgtcgc
     4381 tgctggattc aaccccaaca gcactgcggc gaggaacatc ctggcggccg gctatcctcc
     4441 cgatgtgaca accaccaagg acggaacgac ggtttcgctg tgggggcttc attacctcca
     4501 gttctgggag gtcacgatgt gccagtggca aaagcgattg gacccgggtt acaacaccta
     4561 cagcgcggga ctcggcaatt acgtctatct caaccgagtg tctgcttcca acgtcgccga
     4621 caatctcgca gctttccgca ccaccggtcg catc
//
LOCUS       DATILV010000983         7566 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2804877, whole genome shotgun sequence.
ACCESSION   DATILV010000983 DATILV010000000
VERSION     DATILV010000983.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7566
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2804877"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(89..1969)
                     /gene="trbF"
                     /locus_tag="VLJ17_23765"
     CDS             complement(89..1969)
                     /gene="trbF"
                     /locus_tag="VLJ17_23765"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TrbF"
                     /protein_id="HSV26031.1"
                     /translation="MLLPFVAGFFLTNLFRAINALISTELTSDLALAAGDLGLLTSVY
                     FLTMAAAQVPIGICLDRYGPRRVESALLLVAAGGAALFGMSQGFAAVVSGRALIGLGV
                     ASGLMAGIKAVTLWFPKERVALTNGWLITLGALGAVTATAPAELLLAWTGWRGLFGVL
                     ALTTAATAVIIYIVVPEASWNSLRSDPVSWKKVYSDPRFWRLAPLSATCIGTAWGLQG
                     LWVAPWLIDVEGVDRAGVVRHLFVMALAPSIGALLLGLAADWLNRRSIGPQAQLTFIV
                     TVFVAAQLTLILGLPVPSYLLWSIVAAAVSATVLSYAILAEYIPQELTGRVNGLLNLF
                     HFGAAFAVQYAIGLIVQHWTSVNGHYPVIAYRVAFGLNLTLQLAALVWFELPRIRKLL
                     SALASTCITKRLRHQPAPMPASPYQQALQVWLGMCDAAHAEAASWRRAAFGSAGLSVL
                     LAGTLAWMAARQSVISYVIDVDRVHIANNLYSAAQPVAPSDAQVAYFLARFVSNVRSL
                     SLDPVVVRANWLDAFDYVTDGAAQTLNNYARDAAPFAKIGAQAVIVEVIYVVRASTNS
                     FEIRWRERSYQGGTLTRTESFTGVATIAFNFATGANPTKNPLGLYIRSLDWASDLNTQ
                     GT"
     gene            complement(2476..4002)
                     /locus_tag="VLJ17_23770"
     CDS             complement(2476..4002)
                     /locus_tag="VLJ17_23770"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HSV26032.1"
                     /translation="MDNALRNGIAGRYGNSRRQFLRDMVTGGVSALAAVSVPAGAEEK
                     AELPTARNEQLTKSGSVADTLADFAVKLRYDDLPAGIVRTVKRTILDTIGCAIGGYEA
                     EPSRIARKLAGRVSGAPAATVLCSGVKTSHDLAVFANGVMIRYLDFNDGYITPKGGGH
                     PSDTIAALLSSAEIVGSSGRDLIVATALSYEVFCKVADVLDTRGLGLDQSTILGLASL
                     VGASRLMGLSKEQIVHAIGITVGGNTAINQGRVGTLSNWKDFASAEASRKAIFSAQLA
                     QAGMTGPYQVFEGPLGFFNTISHQAFTLPPLGEPFGIMKAFTKRFPLGQYAQTVAEGA
                     AQMRSFFSSIDEIDEVNIRVSRNAIKVMADSPDKWKPQSHETADHSMPYAAAVVLMYG
                     TIDDHYYEDPYLHDARLLDLVSRVRCLPSAEADAHEKEYNLCDFEVVLKSGQRKAVRV
                     EYHRGHPKNPMTDIEMEEKFRSLARRHLAADRTDALLRQLWTLDNLPSTGLLVEMTKV
                     "
     gene            complement(4116..5030)
                     /locus_tag="VLJ17_23775"
     CDS             complement(4116..5030)
                     /locus_tag="VLJ17_23775"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSV26033.1"
                     /translation="MRPKTADALAIFAWFTFIGAAGAQDLGPQVKKLADGVYVHTGRG
                     FESNSGIILTQDGVIVIDTGQNPYESRNIWATVRNLTSMPVRFVIDTEPHADHTTGHY
                     MFSPPAIVIAAAGAGESMRTADRNAPDRIQRLAATSPEFKAALEGYRFVAPHIEYHDR
                     MTINLGGRTLELIYLKGVHSEADTAIWLPNERVLFSASAFVVNQINILRPFVTIPDIL
                     AAGKMMKALNPELVVPGHGTPGTVKIFEDGEAYYTLLLDRVGAMVKAGKSLDDIKKEV
                     KMPEYASWGSQDRFPTNVEAAYKAVAGK"
     gene            5628..6575
                     /locus_tag="VLJ17_23780"
     CDS             5628..6575
                     /locus_tag="VLJ17_23780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV26034.1"
                     /translation="MLSRRDALTTAVAASAGLALAAPACKPANAQPARRIIVDSQVHI
                     WLADTPDHPWPADGIGQAHIPRPFSYYELLARMDEAGVDRVVIVPPSWEGYHNEYAME
                     AAKKWPHRFAVMGRLRLDDPKSKDLLSIWKDQPGMLGVRHTFNRLQTAWLTDGTADWF
                     WPAAAKAGIPVMTPTAGRARDFLRIVERNPDLIFVIDHMNLSDETAKQGKIPEAIVEV
                     VEFAKYPNVQVKMSSVPHKSSQPYPFRDLTDHIWRVFDAFGPRRSFWGTDLTAGIDRF
                     PKFTYQQRITHFTEELPFLSEEDKDWIMGRAIMRRLGWA"
     gene            7014..7499
                     /gene="msrB"
                     /locus_tag="VLJ17_23785"
     CDS             7014..7499
                     /gene="msrB"
                     /locus_tag="VLJ17_23785"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004677354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HSV26035.1"
                     /translation="MLTRRRLLNQTAATIGTASALWWISVARSEIFEVTHTDAEWRKL
                     LTPAQFAVLRASATESPFTSALLHEERRGNFACAGCSLELFSSTTKFDSGTGWPSFWA
                     PIENTVGTTKDTSFGVVRTAVHCSRCGGHLGHIFNDGPKPTGLRYCMNGVALTFKPVA
                     A"
BASE COUNT         1581 a         2264 c         2230 g         1491 t
ORIGIN      
        1 ttatgtcgta gtgccttggc gtagaatgac agggaatcga aaaggcgccg ttgtcgatcg
       61 atcggccagg gaaaaccagc ctcgatgatt atgtaccttg agtattgagg tcgctcgccc
      121 agtcaagtga acgaatgtag agcccgagcg ggtttttggt cggatttgcg ccggttgcga
      181 agttgaacgc aatggtggcg acgccggtaa agctctctgt ccttgtcaag gtgccgccct
      241 gatacgatcg ctctctccag cgtatctcaa aggaattcgt cgatgcgcgc acgacgtaga
      301 tcacttccac gatgacggcc tgcgcgccga tctttgcaaa tggagcggca tcacgggcgt
      361 agttattgag cgtctgcgct gcgccatcgg tcacatagtc aaaagcatcg agccaattcg
      421 cccgcaccac gacaggatca agcgacagcg atcgcacatt gctgacgaaa cgtgccaaga
      481 agtacgcaac ttgcgcgtct gacggcgcga caggctgcgc cgccgaatac aggttgtttg
      541 cgatgtgtac acgatcgaca tcgatgacgt aggagatgac gctctgtcgg gcagccatcc
      601 atgccagtgt tccagcgagc aataccgaaa gaccggccga tccgaacgca gcgcggcgcc
      661 aactggcagc ctccgcatga gcggcgtcgc acatgccgag ccatacttgt agcgcctgct
      721 gataggggct tgcgggcatt ggggccggct ggtggcgcag gcgcttcgtt atgcatgttg
      781 acgccagagc cgataacaat tttcggatac gcggaagttc gaaccagacc agcgcggcaa
      841 gttggagggt cagattcagg ccgaatgcca cccggtaggc gatgaccgga tagtggccat
      901 ttacgctcgt ccaatgctgg acaatgaggc cgatcgcgta ttggaccgca aaggcggcac
      961 caaagtgaaa gagattgagt aagccattta cccgtccggt aagttcctgt ggaatgtact
     1021 ctgccagaat tgcgtagctg agaaccgtag cgcttacggc ggccgctaca atcgaccaga
     1081 gcaaatacga cggaacaggt aagccgagga tcagcgtgag ctgtgctgct acaaataccg
     1141 tcacgataaa agtcaattgc gcttgcgggc cgatactacg ccgattgagc cagtcagccg
     1201 ccaggccgag aagcagcgcc ccgatgcttg gcgccagcgc catgacgaac aaatgccgga
     1261 ccaccccggc gcgatcgacc ccctcgacat caatgagcca cggtgcaacc cacaatccct
     1321 gcaagcccca ggctgtcccg atacaggtgg cggagagtgg ggccaggcgc cagaaccgag
     1381 gatcggaata tacctttttc cagctgaccg ggtcagacct caacgaattc caactggctt
     1441 ccggaacgac aatatagatt atgacggcgg ttgcggcggt cgtgagagcg aggacgccaa
     1501 acaaaccacg ccaccccgtc cacgcaagta gtagttctgc cggcgctgtt gcggtcacag
     1561 cgcccaatgc cccaagcgtg atcagccagc cgttggtaag cgcaacgcgc tccttcggaa
     1621 accacagcgt gacggctttg atcccagcca tcagtccgga cgctactcca aggccgatta
     1681 acgcgcgacc ggataccacg gcagcgaaac cctgtgacat tccgaatagt gcagcgccgc
     1741 ccgcggcgac gaggagcaac gcgctctcaa cacggcgtgg accgtagcga tccaagcata
     1801 tgccgatcgg aacctgggct gcagccatgg tcaaaaagta caccgacgtg aggaggccaa
     1861 gatctccggc ggcaagcgcc agatcggatg taagctccgt ggagatcagc gcattgatgg
     1921 ccctgaacag atttgtgaga aaaaatcccg cgacaaaagg cagaagcacc tgcacaatcg
     1981 gcgatgttgt ccctcccggg tattgcaatg ttcgtcgata caatgctttt ggaacggtca
     2041 taactgcatg gcgataggag ggtcaacggc cacctgaact tgggcaggtc atgacgaagg
     2101 gatgggattc tcgaaagctg ctactggcgc ttacatccca gacttgagca gagaatctcg
     2161 ttcatgacca cgcctggatg tcgctgggca agctgacttt cccctgccgc acgcaaaagt
     2221 gcgcgatgga ttgcgccaga gattggcgct ccgggaacgc cccgaattgg gtctgccatg
     2281 tgagctccat cctggtatac aggaatgagc aaaggcgtac gcccgaggca atgcaatctg
     2341 aaaattagga tcgtcgtggt ttcggacagc gcagcgtgta ataaccgatc agagcggttc
     2401 gtctcgactc attgaatttc gacgcgagcc cctattctgt tagaccgtca atcgctcctg
     2461 acggaccgaa gggcgttaca ctttcgtcat ctccacaagc aatcccgtgc tgggcaagtt
     2521 atccagcgtc cacagctgcc gcagcagcgc atcggtccga tcggcggcca gatgtctgcg
     2581 cgccagagag cggaacttct cttccatttc gatatcggtc atcgggtttt tcgggtgccc
     2641 gcgatggtat tcgacgcgaa ctgccttgcg ctgccctgat ttgagaacga cttcgaaatc
     2701 gcagagattg tattcctttt cgtgcgcgtc ggcctcagcc gatggtaggc aacgcacccg
     2761 gctgacgaga tcaagcagtc gcgcatcgtg caggtacgga tcttcgtagt agtgatcgtc
     2821 gatcgtgccg tacatcagca cgacagcggc cgcataaggc atgctatggt ccgccgtttc
     2881 gtggctttgt ggcttccatt tgtcggggct gtcggccatg accttgattg cgttccggga
     2941 cacccggata ttgacctcat cgatctcgtc tatgctggaa aagaatgatc gcatctgcgc
     3001 ggcgccttcc gccacggtct gcgcatattg tccgagcgga aagcgctttg tgaacgcctt
     3061 catgatgccg aagggttcgc caaggggtgg caatgtgaag gcctgatgac tgatggtgtt
     3121 gaagaacccc aacgggccct cgaacacctg gtatggcccg gtcatgccgg cctgcgcgag
     3181 ctgggccgaa aagatcgcct tgcggctcgc ttcggcgctg gcaaagtctt tccagttgga
     3241 caaggtgccc acccggccct gattgatggc ggtattcccg cccaccgtaa tgccgatcgc
     3301 atgaacgatc tgctctttgc tcagtcccat cagccggctg gcaccgacaa ggctggcgag
     3361 tccgaggatg gtcgactgat ccaagcccag ccctctggta tccagcacat cagcgacctt
     3421 gcagaagact tcgtaggaga gcgcggttgc gacgatcaga tcgcgcccgc tgcttccaac
     3481 aatctcggct gatgaaagca gggccgcgat ggtgtcgctc ggatgaccgc cgcccttcgg
     3541 cgtgatgtag ccgtcgttga agtctaggta gcggatcatg acaccattag cgaacaccgc
     3601 gagatcgtgg cttgtcttga cgccgctgca caggaccgtc gcagctggcg cgccgctcac
     3661 gcggccggcg agcttgcggg cgatccggct cggttcggcc tcgtatccgc cgatcgcgca
     3721 gccgatggtg tcaaggatgg tgcgcttcac ggtgcgtacg atgcccgccg gcaagtcgtc
     3781 gtaacggagc ttgacggcga aatccgccag cgtatctgcg accgaaccgc ttttcgtcag
     3841 ttgttcattg cgcgccgtgg ggagctctgc cttttcctcc gcacccgccg gcaccgacac
     3901 agctgcaagc gccgagacgc cgcctgtaac catgtcgcgc aggaactgac gacgcgagtt
     3961 cccgtacctg cctgcaatgc cattccgcag cgcgttgtcc atgcaaattc tccgtattgc
     4021 gagcctggat tcgcttcagt tgccaaacac tggccacgcg agccgtttag tagaacattg
     4081 cggcatcagg gcacgcccgc ggtcaatccg accaactatt tcccggccac ggccttgtag
     4141 gccgcctcta cattggtcgg gaaacgatcc tggctgcccc agctcgcata ctcgggcatc
     4201 ttcacttcct tcttgatatc atcgagcgac ttgcccgcct tcaccatcgc accgacccga
     4261 tcgagcagca gcgtataata cgcctcacca tcctcaaaga tcttcactgt gccaggtgtg
     4321 ccgtgccccg ggaccacgag ctcggggttc agcgccttca tcatcttgcc ggcggcgagg
     4381 atatccggaa tggtgacaaa ggggcgcagg atattgatct ggttgacgac gaaagcggac
     4441 gccgaaaaca gcacgcgctc attgggtagc catatggcgg tgtcggcttc gctgtgtacg
     4501 cccttgaggt agatcagctc gagggttcga cctcccaaat tgatggtcat cctgtcgtgg
     4561 tactcgatgt gcggtgcgac gaatcggtag ccttcaaggg ccgctttgaa ctctggagat
     4621 gtcgcggcga gacgctggat gcgatccggc gcattgcggt cggcggtgcg catcgactcg
     4681 cccgcccccg cggccgcgat gacgatggcg ggcggcgaga acatgtagtg gccggtcgta
     4741 tgatcagcat gcggctcggt gtcgatgacg aaacgaaccg gcatcgaggt gagattgcgg
     4801 acggtcgccc agatattgcg agactcgtac ggattctgcc cggtatcgat cacgatgaca
     4861 ccgtcctggg tgaggatgat cccgctgttc gattcaaagc ctcttccggt gtgaacgtag
     4921 acgccatcgg cgagcttctt gacctgcgga ccgagatctt gagcgcctgc ggcaccgatg
     4981 aacgtaaacc aggcgaaaat cgccaacgca tcagcggtct ttggtctcat gacttcctcc
     5041 cgtttgaaaa cggcgatctc tccgcttccg tgccgcagct tatgccttcg gcaccgtgcg
     5101 acgcaacgct gtggcgacgc ctcgcatcga ccgattacgc gcaacgagaa gacccgttgg
     5161 acgaaaaaca atgttccgcc aagcgccgtc aggagcgctg cgggcgcggt ttcttgcggg
     5221 ggcgacaggt cgccggccgg cggtcacctt gcgccttcga ctttcgcggg ttcgttgtcg
     5281 atctggcagg cagccacgtg ccgcaaaggc gcattgcgcc aggaagggta atcgctcaag
     5341 aaggactgga aggtccttca caagatcgcc gtcgagtgcg gtggcgggct ggcactgtgc
     5401 aacgggtcac ggccgagttc gcagccaaac aaactaggac ctggatagaa ttgatcgatg
     5461 ctgtttctta tggatcattc gggtcgtttt ctttgtatgc acgctgcgtc cgttgtcctg
     5521 cgaaatccga aatggcccgc acgcggttgt tgcggcgcga agctataaga gcaagaatca
     5581 tcagcgcatg ccaaaacaca atctgaaagt ttgccgagga ggatctcatg ttgtcacgac
     5641 gcgatgctct caccaccgca gtagccgcca gtgcgggtct cgcgctggca gcgccggcat
     5701 gcaaacccgc caacgcacag ccggcacgcc gcattatcgt cgactcgcaa gtccacatct
     5761 ggctcgcaga tacgcccgat catccctggc ccgccgatgg cataggccaa gcgcacatcc
     5821 cgcggccatt ctcatactac gaactcttag cgcgcatgga cgaggcgggc gtcgaccgcg
     5881 tcgtcatcgt gccgccgtcg tgggagggct atcacaacga atacgccatg gaagcagcca
     5941 agaagtggcc gcatcgcttc gcggtcatgg gccgtctccg gctcgacgat ccgaaatcga
     6001 aggacctact ctccatctgg aaggatcagc ctggcatgct gggcgtccga cacactttca
     6061 accgcttgca gaccgcttgg ctcaccgacg gcaccgccga ctggttctgg ccggccgccg
     6121 ccaaggcggg catccccgtg atgacgccga ccgcaggccg tgcgcgcgac ttcctgcgta
     6181 ttgtcgagcg caatccggac ctcatcttcg ttatcgacca catgaacctg tccgatgaaa
     6241 cggccaagca gggcaagatc ccggaagcaa tcgtcgaggt tgtcgagttt gcgaagtacc
     6301 cgaatgtgca agttaagatg tcttccgtgc cgcacaagtc gtcgcaaccc tacccgtttc
     6361 gcgacttgac cgatcacatt tggcgcgtgt tcgacgcctt cggcccgcgc cgcagtttct
     6421 ggggcaccga cctcacagcc gggattgacc gcttccctaa gtttacctac cagcagcgca
     6481 tcacccactt caccgaggaa ttgccgtttc tgtctgagga ggacaaggac tggataatgg
     6541 gtcgcgcgat catgcggcgg ctcggctggg cgtgaaagcg cgatcaacac ggcaatcccg
     6601 ggggcgccga aaaatcgccg agatagcaac gatgttttat cgaacctcgc tcggtcctgc
     6661 ccgaccgcat gcgtggcgtc gcggccaaaa tccgtgctga ccgcacatat ctaagcgtgc
     6721 accgcctaac cgcagcgtcc catgcgttgc gctacaagca atccagcaaa gggcgtgagc
     6781 atattcggat tcgaagagta tctcggggcg aaggctgtgc ttgatcaccg gagcgcgtga
     6841 agttggtagc acagtattcc atccccacag cgcgtggttg agcatccacc ggtgaccgcg
     6901 catcaaatgt ctgtgagatg cgctattccc gtcgaaatac aacgtattcg ctaatatcgt
     6961 tgtcaacctg cacaggagag cgagcctaca gggccatcgg gaggaccaga ttcatgttga
     7021 cgagacgccg ccttctgaac caaaccgccg ccacaattgg gacggcgtcg gcactgtggt
     7081 ggatctccgt cgcgcgaagt gagatcttcg aggttaccca caccgatgcc gaatggcgta
     7141 agctcctgac tcctgcccag ttcgcggtgc tgcgcgcgag cgcgaccgaa agccccttca
     7201 ccagtgcgct gcttcatgaa gagcgtcgtg gtaattttgc ttgcgcaggt tgcagcctcg
     7261 aactgttctc atcgactaca aagttcgaca gcggcaccgg ctggccaagc ttctgggcgc
     7321 caatcgagaa caccgtcggt acgaccaagg acacgagctt cggcgtggtg cggaccgctg
     7381 tgcactgcag ccggtgtggc ggacacctcg gtcatatctt caacgacggt cccaagccga
     7441 cgggcctgcg ctactgcatg aatggcgtgg ccctcacctt caagcccgtc gctgcgtgac
     7501 gccgaaaggg caacatgatt ttgttggtgc tggcctacct cggtggtgtg ctgaccatcg
     7561 tcagtc
//
LOCUS       DATILV010000984         3915 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2805073, whole genome shotgun sequence.
ACCESSION   DATILV010000984 DATILV010000000
VERSION     DATILV010000984.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3915)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3915)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3915
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2805073"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..380)
                     /locus_tag="VLJ17_23790"
     CDS             complement(<1..380)
                     /locus_tag="VLJ17_23790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26036.1"
                     /translation="MAAHLSEIKSYDPAPDKVFNAGATGEYTWGTFMNSVGAYASLTG
                     KRTLGNRDLAREVGQIGLLEHRLKGTRFSQLYGVLALRFFGHDLNSNPVWQSLNEAER
                     AQWRQWLDVSAFYDPTTQQVIKLP"
     gene            complement(691..1455)
                     /gene="kduD"
                     /locus_tag="VLJ17_23795"
     CDS             complement(691..1455)
                     /gene="kduD"
                     /locus_tag="VLJ17_23795"
                     /EC_number="1.1.1.127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018690323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008678 - 2-deoxy-D-gluconate
                     3-dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000272 - polysaccharide catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase
                     KduD"
                     /protein_id="HSV26037.1"
                     /translation="MMVLDSFKLNGKVALVTGAATGLGQAIAIALAEAGADVVCHGNT
                     RAPDATCEAVTKTGRKAFALTGDLSDRATPRMLIEATISHFGQLDVLVNNAGTIRRSP
                     ATDYSEEDWATVIEVNLSSVFRMAQLAGRHMIERGGGKILNLASLLSFQGGITVPAYA
                     ASKGGVAQLTKALANEWAAKKINVNAIAPGYMRTDNTRALQQDEARNRQILERIPAGR
                     WGEPSDLTGAAVFLCSAASDYVNGHVLVVDGGWMGR"
     gene            complement(1675..3276)
                     /locus_tag="VLJ17_23800"
     CDS             complement(1675..3276)
                     /locus_tag="VLJ17_23800"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV26038.1"
                     /translation="MKEQIVAAEKGVSSIKSLSEASPPSAAGVSVSGAVVAASAESPG
                     GRIGRYRWVICGLLFFATTINYVDRQVLGLLSKDLQLALHWTELDYGNIVAAFNAAYA
                     LGLLGAGRLMDRFGTRIGYSVALTVWSLAAMGHALASSAFGFGVARAALGAGEAGNFP
                     AAIKTVAEWFPKKERALATGIFNSGSNVGAIVAPLAVPYVASHFGWQWAFIITGAIGL
                     VWLAFWIPLYARPELHPRVKKEELAYIQSDPPDSEAARIPWLRLIPYRQTSAFAIGKA
                     LTDPIWWFYLYWVPPFLRQNHGLDLTTIGPPLIAIYVIADIGSIGGGWLSSSLIKRGW
                     TINRARKTAMLICALLVTPIVFVSGVKSLWLAVGLVGLAAAAHQGWSANIFTLASDIF
                     PRRAVGSVVGIGGMAGAFTGATMAVIVGYILQVTGGNYRIPFIIGGTAYLTALLIIHM
                     LVPRIEPVGDVEHVPATPLSIGTIVGFGFMGIIFGSFAGWCTGILSRVSGPHLLEYMA
                     AGALAGSIIGVISGIIITGSKSVKA"
     gene            complement(3273..>3915)
                     /locus_tag="VLJ17_23805"
     CDS             complement(3273..>3915)
                     /locus_tag="VLJ17_23805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSV26039.1"
                     /translation="TDDLNARVAEDFADERKGFSLRPWRKILRSLRLNPSPSLNLPAV
                     VFLLFVLSITASAQRKPSEATRPVVVMSSQSLDDLKQKLQPGNKTEELIDSAGMQLRV
                     AIQHEKNKTGAAAELHDASDDVYYVLEGGATLVLGGKLEAPKEVEPGEWRSPKIIDGK
                     TFEITKGDLVVVPRGTPHQRSTANKDFTMILIKIYAEPLKPGAPKPSGLSQKP"
BASE COUNT          862 a         1139 c         1100 g          814 t
ORIGIN      
        1 tctggcagct tgatgacctg ctgcgttgtg ggatcgtaaa acgccgacac atcgagccac
       61 tgccgccatt gcgcgcgttc tgcctcgttg agactttgcc agactggatt gctgttcaaa
      121 tcatgaccaa agaatcggag ggccagcacg ccgtacaact gtgagaagcg ggttcctttt
      181 aagcggtgct ccaggagtcc aatctggccc acttcgcgtg cgagatcgcg attaccgagc
      241 gtgcgctttc cggtcaatga tgcataggcc ccgactgaat tcatgaaggt gccccaggtg
      301 tactcgccgg tggcgcctgc gttaaagacc ttgtccggtg cgggatcgta ggatttgatt
      361 tcgctgagat gggcggccat ctctttgtcg agaaagtcgg ttatctcttt attgagggat
      421 gacgcttcaa cgatcgaggg tgcagaggag gccggctgcg cgttggcgac gagtggggac
      481 attggtagta gcaagaatac gcaaatccag ccccctgtct tagtcttcaa gttaagacac
      541 cgcttattgt aagagcggct aaacgcaaag gtcgcgaagg cgttcgcaaa gtaacgcaaa
      601 ggactgcagc cgcttggcgt acctttgcgg gctctctttg cgtactttgc gtttaatccg
      661 aatctcatct cgggctcccg tagaaagtgt tcatctcccc atccaaccgc catcaaccac
      721 cagcacgtgg ccattcacat aatcgctcgc cgccgaacac agaaacaccg cggcgccagt
      781 gaggtcggag ggctcgcccc agcgtccggc gggaatgcgt tcgagtatct gacgattgcg
      841 cgcctcgtcc tgttgcagcg cgcgcgtatt gtcggtgcgc atgtaacccg gagcgatcgc
      901 attgacgttg atcttcttcg cggcccattc gtttgccagc gctttggtca gttgcgccac
      961 gccccctttc gaagctgcat acgccggcac ggtgattccg ccctgaaacg aaagcagcga
     1021 tgcgaggttg agaatcttgc ctccgccgcg ttcgatcatg tggcggccgg cgagttgggc
     1081 catccgaaag acgctggaaa gattcacttc aatcacagtg gcccagtctt cttccgagta
     1141 gtcggtcgcg ggcgagcggc gaatggtgcc ggcattatta accagaacat cgagttgacc
     1201 gaagtgagag atcgtggcct cgatcaacat tcgtggtgtc gcgcgatcac tcaagtcacc
     1261 agtcagggca aatgcttttc gacccgtttt ggtgacggct tcgcaagttg cgtcgggcgc
     1321 acgggtattg ccgtgacaga cgacgtcagc acccgcttcc gccagggcga tagcaatcgc
     1381 ctgccccaac ccggtagcag cgccggttac cagcgcgact ttgccattta gtttgaatga
     1441 atcgagaacc atcatcagcg atgttcggct gaagcgccga acaattccaa gacaagtaat
     1501 tcccgcgaac cgcgaaagca tagagactgc ggctgcggct ttgccgcctg atatgcggaa
     1561 aggctgtgcc tttccgagca cgaatgaccc gttatttatt gaggctatgc ctcggttacc
     1621 tcggggaggc atagccgcaa cccccggagc tttatgtcat cgctggttcg caaactaagc
     1681 cttaacggat ttagagccgg taataattat gccgctaatc accccaatga ttgatccggc
     1741 gagcgctccg gcggccatgt actccagcag atgcggaccc gacactctgg acagtattcc
     1801 tgtgcaccaa cccgcaaatg aaccaaagat gattcccatg aatccgaagc cgacgatcgt
     1861 cccgatcgag agtggcgtgg ctggaacgtg ctcgacatcg ccgacaggtt cgatccttgg
     1921 gaccagcatg tgaatgatga gtagcgccgt caagtaagca gttccgccga tgataaaagg
     1981 aattctataa ttgcccccgg tgacttgtag tatgtagccg acaatcaccg ccatggtggc
     2041 gccagtaaac gcaccggcca tgccgccaat gcccacgacc gagccaactg cgcggcgtgg
     2101 aaatatgtcc gaggccagcg tgaaaatatt cgccgaccat ccctggtgcg ccgccgctgc
     2161 gagtcccacc agcccgaccg ctaaccacag gctcttgacg ccggaaacaa agactatcgg
     2221 tgtcaccaaa agagcgcaga tcaacattgc cgtcttgcga gcgcgattga tcgtccagcc
     2281 gcgcttgatc aggctcgagg aaagccagcc accgccgatg ctgccgatgt ccgcgatcac
     2341 gtaaatggca atcagcggcg gaccaattgt ggtgagatca agcccgtggt tctgtctcag
     2401 aaacggcggc acccaataaa gataaaacca ccagatggga tcagtcagag cttttccgat
     2461 tgcgaacgcc gaagtctgcc ggtaaggaat taaccgcagc cagggaatcc tggcggcttc
     2521 ggaatccggc gggtcactct ggatgtaggc gagctcctcc tttttgactc gcgggtgtaa
     2581 ctcgggtcgc gcgtagagag gtatccagaa agcgagccac accaaaccga ttgcgccggt
     2641 gattatgaat gcccattgcc agccaaagtg gctggcaacg tacggaaccg cgaggggcgc
     2701 gacaatagcg ccgacattcg accccgagtt gaaaatgccg gttgccaggg cgcgttcctt
     2761 tttgggaaac cactcggcca cagtcttgat agccgcggga aaatttcccg cctcgccggc
     2821 tcccagggcg gcccgcgcca caccaaaacc aaacgccgaa ctcgccaggg cgtgtcccat
     2881 cgccgccaga ctccaaactg tgagcgccac cgaataaccg atcctggtac cgaagcgatc
     2941 catcaagcgc cccgcgccaa gcagtcccag cgcgtaagcg gcgttaaagg ctgcgacgat
     3001 gttgccgtaa tcaagctcgg tccagtgaag ggctaattgc agatcctttg aaagaagtcc
     3061 cagcacttgc cggtcgacat aattgatggt ggtggcaaag aaaagaagcc cgcagatcac
     3121 ccaacgataa cggccaatgc gtccgcccgg cgactcggca ctggcggcca caaccgcacc
     3181 gctgacactg acgccggcgg ctgaaggcgg cgacgcctcg ctcaaagact tgatcgacga
     3241 cactcctttt tcagcggcga cgatttgttc tttcatggtt tctggctcaa cccacttggc
     3301 ttgggcgctc ccggtttcag cggctccgca tagatcttga tcaggatcat ggtgaagtct
     3361 ttgttggcgg tgctgcgttg gtgcggcgtg ccgcgcggaa ccaccaccag atcacctttg
     3421 gtgatttcaa aagttttgcc gtcgataatt tttggactgc gccattcccc gggctcgacc
     3481 tctttcggag cttcgagctt gccacccagg accagcgtcg ctccgccctc cagcacgtaa
     3541 tagacatcgt ccgaggcgtc atgcagttcc gcagccgcgc cagtcttgtt cttttcatgc
     3601 tgtatcgcca cgcgcaactg catgcccgca ctgtcgatca actcttcggt cttgttaccg
     3661 ggttgcagtt tctgtttgag atcgtcgagc gactgtgacg acatgaccac gaccggacgg
     3721 gtagcttcgg aaggttttcg ctgagcggac gcagttatcg ataaaacgaa aaggaggaac
     3781 acaacggcag gtaagttgag cgatggcgaa gggtttaacc gcaaagaacg caaaattttt
     3841 cgccagggtc gcagagaaaa acctttgcgt tcgtccgcga aatcctctgc gaccctggcg
     3901 tttagatcgt cagtt
//
LOCUS       DATILV010000985         3433 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4588864, whole genome shotgun sequence.
ACCESSION   DATILV010000985 DATILV010000000
VERSION     DATILV010000985.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3433)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3433)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3433
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4588864"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            190..627
                     /locus_tag="VLJ17_23810"
     CDS             190..627
                     /locus_tag="VLJ17_23810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26040.1"
                     /translation="MTSESQLREKLRKIEALFVGAGTAGERLAAEAALQRVRARVEEL
                     ARHDPPIEQQFSLPDQWSRHLFLALCRRYGLRPFRYRRQRRNTVMVRASRGFVDRVLL
                     PEFTELEGALQVYLHEVTLRVIREEIYDDASDAQEVPDALPSN"
     gene            complement(628..2211)
                     /locus_tag="VLJ17_23815"
     CDS             complement(628..2211)
                     /locus_tag="VLJ17_23815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HSV26041.1"
                     /translation="MTLSSRLAALSEECSTLATERDAAIAQRDAAIQENDKLLMILSQ
                     YKRTIFGPRSETLDIGQLSLFTIRAQAARAAANDDVTGGRLPDGAERRGKRPARRNRG
                     KLPEHLPRIDVVIDIESHICPCCGEQLHKIGETVKEAFDVIPMQYRVKRIMRPRYGCR
                     GCRQGVLQAPAPAQAIDGGMVTEALLAHVAVMKYGYQLPLYRQEQMFAAQGVTLDRQT
                     LASWMGRVAWWLKPLHALLRRAVMSYPRLFADETPLPVLDPGRGRTKVCQFWAIATDD
                     RPWGGPAPPAVVYVFAEDRKAIRARQLFGDYDGILQVDGYAGYKGLIKNGGRLVQLAF
                     CFAHARRKFWDVHVATKSPIAAEALQRIAMFYAIEDRIRGLPATQRAAVRQSDTRPLI
                     EDFKPWLEARLLEVSKKSGLGKAIRYTLNHWDGLTRFIDDGRIEIDSNTVERSIKPIG
                     LGKKNYLFAGSEGGAETWATLASLINSAKLHNIDPRHYLTDVLERIVSGRTKINQLNT
                     LLPWNWKAERHGSEPKLAA"
     gene            complement(2311..2661)
                     /gene="tnpB"
                     /locus_tag="VLJ17_23820"
     CDS             complement(2311..2661)
                     /gene="tnpB"
                     /locus_tag="VLJ17_23820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011970376.1"
                     /note="TnpB, as the term is used for proteins encoded by
                     IS66 family insertion elements, is considered an accessory
                     protein, since TnpC, encoded by a neighboring gene, is a
                     DDE family transposase; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HSV26042.1"
                     /translation="MIGLRAGLSIWIATQPVDFRRGMDSLAMLVSEAFGADPFDGGLY
                     VFRSKRRDRVKILTWDGSGLVLYYKRIEGQFTWPPIKEGVMSLSHAQLSVLLDGSDWK
                     RVPMRVVDQPVRAG"
     gene            complement(2658..3059)
                     /locus_tag="VLJ17_23825"
     CDS             complement(2658..3059)
                     /locus_tag="VLJ17_23825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSV26043.1"
                     /translation="MPILEHGADTLQRVEIITGTGRRRRWSTDAKAAIVAESFTPGAS
                     VSAVARRHDISPSLLFLWRRQATRAQVAERGDRGMPPGFVPVAITGCGGPSEEQAAIE
                     IEVGAIRIRVRGTVDRQALCEVLAAVGTVGR"
     gene            complement(3227..>3433)
                     /locus_tag="VLJ17_23830"
     CDS             complement(3227..>3433)
                     /locus_tag="VLJ17_23830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26044.1"
                     /translation="NDRDARDVGHVRFALAAVVSEAGLAAVSITHTIAAAARVSYRPR
                     HLLISNYRQCWQGKIGANNRVVKL"
BASE COUNT          635 a         1094 c         1031 g          673 t
ORIGIN      
        1 agtttggaaa catcagcgct atccctcgca gcgcgggccc cgtctctggc tggtgagcgt
       61 cacgagagga tcaccggtgc ccgggcttga cttgcgcgga atgctctgga tagcgcggtc
      121 gggatgattg acgccgccgg cgcgcggtga tgggttgatc ccggttcgga gcgggcaacg
      181 gggatcagaa tgaccagcga gtcgcagctg cgcgagaagc ttcggaagat cgaggcgttg
      241 ttcgtgggtg ccggaactgc tggtgagcgc cttgcagcgg aagcggcgct gcagcgggtg
      301 cgggcccggg tcgaggaact cgctcgccac gatccaccga tcgaacagca attctcactt
      361 cccgaccagt ggtctcggca cctgtttctg gcgctttgcc gccgatatgg gctgcggccg
      421 tttcgttatc gccggcagcg acgtaacacg gtgatggtcc gtgcgtcacg gggcttcgtt
      481 gatcgagtcc tgctgcctga gttcaccgag ctggagggtg cgctgcaagt gtatctgcac
      541 gaggtaacgc tgcgcgtgat ccgcgaagag atctacgacg atgccagcga tgcgcaggaa
      601 gttcccgacg ccttgccgtc gaactgatca agcggcgagc tttggctccg aaccatggcg
      661 ctcggctttc caattccacg gcagcagcgt gttcagctga ttgatcttgg tgcgtccgga
      721 gacgatgcgc tcgagaacat cagtaagata gtgccgcggg tcgatgttgt gaagctttgc
      781 cgagttgatg agtgatgcga gagtggccca ggtttcggcg ccgccctcac tgcctgcgaa
      841 cagatagttt ttctttccca gcccgatcgg cttgatgctg cgttcgaccg tattgctgtc
      901 gatctcgatg cgcccatcat cgatgaatcg cgtcaggcca tcccaatggt tgagggtgta
      961 gcggatcgcc ttgccaaggc cggatttctt cgagacttcc agcagtcgcg cctcgagcca
     1021 gggcttgaag tcctcgatca gcggtctggt gtcggattgt cgcaccgcag ctcgctgcgt
     1081 cgccggcaaa ccgcgaatgc gatcctcaat ggcgtagaac atcgcgatcc gctgcagcgc
     1141 ttccgcggca atcggcgatt tcgtcgcgac gtgaacgtcc cagaacttcc gccgcgcatg
     1201 cgcgaagcag aacgccagtt gtaccagacg gccgccgttt ttaatcagcc ccttgtaccc
     1261 ggcgtagccg tcgacctgca ggatgccgtc gtaatctcca aacagctgcc tggcgcggat
     1321 tgccttgcga tcctcggcga acacgtagac cactgccggc ggcgccgggc cgccccacgg
     1381 gcggtcgtcg gtggcgatcg cccagaactg gcagactttg gttctgccac ggccgggatc
     1441 gagaactggc agcggcgtct cgtcggcaaa cagtcgcggg taggacatca ctgcgcggcg
     1501 caacagcgcg tgaagtggct tcagccacca ggcgacgcgg cccatccacg aggccagcgt
     1561 ttgccggtcg agcgtgacgc cttgggcggc aaacatctgt tcctggcgat acagcggcag
     1621 ctggtagccg tatttcatca ccgcgacgtg ggccagcaag gcttccgtca ccattccacc
     1681 gtcgatcgcc tgggccggcg cgggtgcctg cagtacaccc tggcggcatc cccggcagcc
     1741 gtaccgtgga cgcatgatgc gcttgacccg atactgcatc ggaatgacgt cgaaggcttc
     1801 cttgacggtc tccccgatct tgtgcagctg ctcgccgcag caggggcaga tgtggctctc
     1861 gatatcgatc acgacatcga tgcgcggcaa atgctccgga agcttccccc ggttgcgtcg
     1921 cgccggtcgc tttccacggc gctccgctcc gtcaggcagc ctgcctccgg tcacgtcgtc
     1981 gttggcggcg gcacgagccg cctgtgccct gatggtgaag agagacagct gtccgatatc
     2041 cagtgtctcg gagcgcggac cgaagatcgt gcgcttatac tgggacagga tcatcaggag
     2101 cttgtcgttc tcctggatcg cagcgtcgcg ttgggcgatc gctgcatcac gctcggtcgc
     2161 cagcgtgctg cattcctccg acaacgccgc gagccgtgac gatagcgtca tcacggtttg
     2221 tcggagcaat gctggatcgg aaggcaaatc actcatgcag agtgattcta caacaactcc
     2281 gcatgagtga cgaacgactc ttgataatga tcaaccagct cgtaccggct gatccacaac
     2341 tcgcatcggc acacgcttcc agtccgagcc atcgagcagc accgagagct gagcatgaga
     2401 tagcgacatg acgccttcct tgatcggcgg ccaggtgaac tgcccctcga ttcttttgta
     2461 gtaaaggaca aggccgcttc catcccaggt caggatcttc acacgatctc ggcgcttgga
     2521 gcggaagaca taaagtccgc cgtcgaacgg atcggctcca aaggcctcgc tcaccagcat
     2581 cgccagcgag tccatgccgc ggcggaaatc gaccggctgc gtcgcaatcc agatcgataa
     2641 cccagctcga agcccgatca tcgaccaacc gtcccgaccg ccgccagcac ctcgcacagt
     2701 gcctgccggt cgactgtccc cctgacacgg atgcgaatcg cgccgacctc gatctcgatc
     2761 gccgcctgct cctcactcgg gcccccacag ccggtgatcg cgaccggcac aaagccaggt
     2821 ggcatgcctc tgtccccgcg ctccgcgacc tgcgcccgcg tagcctggcg acgccagaga
     2881 aacaacaggc ttggactgat gtcgtgtcgc cgcgccactg cggacacgct tgcacccggc
     2941 gtaaaactct ccgcaacaat cgccgccttc gcatcggtcg accagcgccg acgtcggccc
     3001 gtcccggtga tgatctcgac acgctgcagc gtgtcggcgc cgtgttcgag gataggcata
     3061 tgcctatcct tatcgctatc cttacgacta tcctttgaca ttgtgacctc gcgacaaacc
     3121 attccgcgag atcttcctag ccgaccagat caaccctcag cgcgtggtct ctgcatgacg
     3181 ctcacgaaat atcgagttac tcaaatcgaa acttgatacc cgctcgtcaa agtttgacaa
     3241 ctcgattgtt tgctccaatc tttccctgcc agcactgtcg gtaattgctg atcaggaggt
     3301 gccgaggacg atatgagacc ctggctgccg ccgcgattgt gtgcgtgatg cttaccgcgg
     3361 cgaggccggc ttctgaaacc acggctgcaa gggcgaaccg aacatgcccg acgtcccgag
     3421 catcacggtc att
//
LOCUS       DATILV010000986         5184 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2291345, whole genome shotgun sequence.
ACCESSION   DATILV010000986 DATILV010000000
VERSION     DATILV010000986.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5184
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2291345"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..193
                     /locus_tag="VLJ17_23835"
     CDS             <1..193
                     /locus_tag="VLJ17_23835"
                     /inference="COORDINATES: protein motif:HMM:NF018933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HSV26045.1"
                     /translation="CGVIDARSRRNQSHFICVACGHEANADTNAAINILRRADGALKP
                     VEDTAVKRPDEAGTIRRAA"
     gene            434..1867
                     /gene="ahcY"
                     /locus_tag="VLJ17_23840"
     CDS             434..1867
                     /gene="ahcY"
                     /locus_tag="VLJ17_23840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012383599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004013 - adenosylhomocysteinase activity
                     [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HSV26046.1"
                     /translation="MTTSPKAAQAESSPQDYVVRDIGLANWGRKEIAIAETEMPGLMA
                     TRDEFGPEQPLRGARIAGSLHMTIQTAVLIETLTALGADVRWASCNIYSTQDHAAAAI
                     AARDIPVFAVKGESLAEYWDYTHRIFEWSDGGAPNMILDDGGDATLLIHLGLRAEQGD
                     TGAISKPTNEEEDILFAAIKKRLKEQPGWYRKNAQSIRGVSEETTTGVHRLYEMQKKG
                     TLLWPAINVNDSVTKSKFDNLYGCRESLVDGIRRGTDVMMAGKVAMVAGFGDVGKGSA
                     ASLRQAGCRVMVSEIDPICALQAAMEGYEVTTMEDAATRADIFVTATGNLDVITVDHM
                     RKMKDRAVVCNIGHFDSEIQVAALKNFRWHNVKPQVDEIEFPDGKRIILLSEGRLVNL
                     GNAMGHPSFVMSASFTNQTLAQIELWTNPGKYEKKVYTLPKHLDEKVARLHLDKIGAK
                     LTRLSPRQSTYIGVPVEGPYKPDLYRY"
     gene            complement(1888..3420)
                     /locus_tag="VLJ17_23845"
     CDS             complement(1888..3420)
                     /locus_tag="VLJ17_23845"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HSV26047.1"
                     /translation="MKGFTSLANTMALGRLLDALSDPKRRGRTVVIVLAAYWAVWTVY
                     AVVAKASQDLHFDMGEMVAWSREVTFGTPKHPPLAAWLVAAWFRVFPLAPWAYDLFAV
                     GIATVSLWVAFVASTRYLDGLKSAVGLALLTLVPFFNFHALKFNANSAMMPWWALTTW
                     FFLRSYESRRLGFAALAGVAAAGAMLTKYWSVVLLAALVIGAVSDSRRKVYFGSAAPY
                     VTIAVGVAVLSPHLAWLYLNGFKSFGYALESHPGTIAEAFISGIGYVAGALGYAVVPI
                     VLVGIAAKPKRANLADMLWPVDPQRRLTAIVFILPLLLPLLMAVVTAEKVVSLWAIAG
                     MTLLPVLLLSSPGIVIPRVAAIRILAIAVSFPVLALLAAPVVAVITHFSGTPNYGTQY
                     SVVAEAASKVWRETTDRPLRLVGSYDNVLNGTVFYFSDRPSTFEIVHPTLTPWTNEAR
                     IAREGILLYCPVVERPCMDALDRRAAAAPLGRRVEVEISRAFLGIPGPITRFAIVAIP
                     PQ"
     gene            complement(3755..3934)
                     /locus_tag="VLJ17_23850"
     CDS             complement(3755..3934)
                     /locus_tag="VLJ17_23850"
                     /inference="COORDINATES: protein motif:HMM:TIGR02607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antitoxin"
                     /protein_id="HSV26048.1"
                     /translation="MSAGALARVCGLPRTRIERIASEQTGITADTAVRLGKAFGTTAQ
                     LWLNLTKMFRSQSAI"
     gene            4192..4599
                     /locus_tag="VLJ17_23855"
     CDS             4192..4599
                     /locus_tag="VLJ17_23855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26049.1"
                     /translation="MRLLSLRSPSKTLAVTAVAASLATAADAQSLQVNGKFGFLGEYE
                     ISATVAPETENASRQFSGPMLVKHVGICTHDGRDERDGQLRLQMLSYARVRATLLLDG
                     HECTFNGRFSHREFGLLTCPNEATVPLRLWLKQ"
     gene            complement(4708..5058)
                     /locus_tag="VLJ17_23860"
     CDS             complement(4708..5058)
                     /locus_tag="VLJ17_23860"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSV26050.1"
                     /translation="MSKGLLWAVLVPCTLISSAHAQSPAGDAVNGRRVYMSVGCYLCH
                     GTVGQGSRPTGPHIAPNPMPYEAFAAVIRHPRNVMPPYTVAVLSDLDLGDIYAYLLTI
                     PPLPDPQAAAILDR"
BASE COUNT         1179 a         1533 c         1542 g          930 t
ORIGIN      
        1 gtgcggcgtt atcgatgccc gcagccgtcg caatcaatcg cactttattt gcgtcgcgtg
       61 tggtcatgaa gccaatgccg acacaaatgc ggcgatcaac atactacggc gcgcggacgg
      121 cgcgttgaag cctgtggagg acaccgcagt taagcggccc gacgaagcag gaaccatccg
      181 gagggctgct tgatgcagaa cactggaacc ccgctattca tggcggggag gatgtcggag
      241 catatcactt tgtctgaacc gcaatgcggc gaaaaccaag gtcgcaccgc cgtttcaaaa
      301 atacattaat aatatcaaat gcatagaaga acacaagata taaagaattc tttatatgtt
      361 tgttgcggcc tgccgtccgc cctgctatag gcagacaaag gaatggccct catagggaga
      421 tcccaggatg cccatgacca cttcgccaaa agccgcccaa gccgaatcga gcccgcaaga
      481 ctatgtcgtc agggacatcg gtctggccaa ctggggacgc aaggagattg ccatcgcgga
      541 aaccgaaatg ccgggcttga tggcgacgcg agacgagttc ggcccggagc aaccgttgcg
      601 aggcgcccgc attgcgggat cgttgcacat gacgatccag acggcggtgc tgatcgagac
      661 ccttacggcg ctaggtgcag acgttcggtg ggcctcctgc aatatctatt cgacccagga
      721 tcatgccgcg gccgccatcg cggcgcgcga cattccggtg ttcgctgtca aaggtgaaag
      781 cctcgcggaa tactgggact acacccatcg cattttcgag tggtcggatg ggggcgcccc
      841 gaacatgatt ctcgacgatg ggggtgacgc cacattattg atccacctcg gcctgcgcgc
      901 cgaacagggg gacactgggg cgatcagcaa acctaccaac gaggaagagg acatcctctt
      961 tgccgccata aagaagcggc tcaaagaaca gcccggttgg tatcgcaaga acgcccaatc
     1021 gatccgtggc gtgtccgaag agaccacgac gggcgtgcat cggctgtatg agatgcagaa
     1081 gaagggtacg cttctatggc ccgctatcaa cgtcaatgac agcgtaacca agtcgaagtt
     1141 cgacaacctt tatggctgcc gcgaatcact ggttgacggc atccgccgcg gtactgatgt
     1201 catgatggcc ggtaaggtcg ccatggtggc gggcttcgga gatgtcggca aaggttcggc
     1261 cgcctcgctg cgccaagctg gctgtcgcgt gatggtttcc gagatcgatc cgatctgtgc
     1321 cttgcaggct gccatggagg gctacgaggt taccacaatg gaagacgcgg cgacgcgcgc
     1381 tgacatcttc gtcactgcca ctggcaatct ggacgtcatc accgtcgacc atatgagaaa
     1441 gatgaaggac cgcgccgtgg tctgcaacat cggtcatttt gacagcgaga tacaggttgc
     1501 ggcgctgaag aacttccgat ggcacaacgt caagccgcaa gtcgatgaaa tcgagttccc
     1561 ggatggcaag cggatcatct tactgtcgga ggggcggctc gtgaatctcg gcaacgccat
     1621 gggacatccg agcttcgtga tgtcggcgtc gttcaccaac cagacgctcg cccagatcga
     1681 gctgtggacc aacccgggca aatacgagaa gaaggtctat acgctgccaa aacatctcga
     1741 cgagaaggtt gcgcggctgc atctcgacaa gatcggcgcc aaacttaccc gcctcagccc
     1801 aaggcagtcg acctatatcg gagtgccagt ggagggacct tacaagcccg atctctaccg
     1861 atattgatcg gccccacggc ctatcgctca ttgtggcggt atagctacaa tggcgaagcg
     1921 agtgatcggc ccgggaattc ccagaaaagc gcgggagatt tcaacctcga cgcgcctacc
     1981 caaaggcgcg gcagcggcgc gcctgtccaa agcgtccatg cagggacgct cgaccacggg
     2041 gcaataaagc aggatgccct cccgggcgat ccgcgcctcg ttggtccaag gagtcagggt
     2101 ggggtgaacg atttcgaacg tggatggacg atccgaaaag tagaagaccg taccgttgag
     2161 cacattgtcg tagctgccga cgagtcgcaa cggtcgatca gtggtctcgc gccagacctt
     2221 gctagctgcc tcggccacca cgctgtattg cgttccataa ttcggtgtgc cgctgaaatg
     2281 cgtgatcacc gcaacgactg gggcggccag aagggcgagc acaggaaacg ataccgcgat
     2341 cgcgagaata cggatcgccg cgacgcgtgg aatcactatg ccgggcgaag acaacagcag
     2401 caccggcaac agcgtcatgc cggcgatcgc ccaaagtgac acgaccttct cggccgtgac
     2461 caccgccatc agaagaggca gcagcagcgg cagaataaaa acaatggcgg ttaggcgccg
     2521 ctgcggatca acgggccaca gcatatcggc gagattggcg cgcttgggtt tggccgcaat
     2581 accaaccaga acgatcggaa cgaccgcata gccgagggcg ccggcgacat acccgatacc
     2641 ggagatgaag gcctccgcta tggtccccgg atgggattcg agcgcatatc cgaacgactt
     2701 gaagccgttc aagtacagcc aagcaaggtg cggcgacagc acggcgacgc ccaccgcgat
     2761 ggtcacatag ggcgctgccg aaccaaaata gacctttcgg cgagaatcgc ttaccgcccc
     2821 aattaccagg gcagcaagca ggaccacgga ccagtatttg gtcagcatgg cgccggccgc
     2881 cgccacaccg gcgagcgccg cgaagccaag ccggcgactt tcgtaggaac gcaggaaaaa
     2941 ccaggtggtc agcgcccacc acggcatcat ggctgaattg gcattgaact tgagagcgtg
     3001 aaaattaaag aatggaacaa gggtcaggag ggcgagccca acggcgcttt ttaggccatc
     3061 gagatagcgc gtcgaggcga cgaaggcgac ccacagggag accgtcgcta tcccgaccgc
     3121 gaacaggtcg taggcccacg gcgcgagcgg aaaaacccgg aaccacgcag cgaccagcca
     3181 cgccgccaaa ggcggatgtt tgggggtccc aaaggtgact tcgcgcgacc acgcaaccat
     3241 ctcgcccata tcgaaatgta aatcctgact cgccttggcc accacggcgt agaccgtcca
     3301 gaccgcccaa taggcggcga gcacgatgac cacagtgcgg ccgcggcgct tgggatcaga
     3361 cagcgcatcg agcagccgcc cgagcgccat ggtgtttgcc agagaggtga atcctttcat
     3421 cgcgctgtac aaatcatacg ccctccgcgc ccgcaaccgc ccgagccctg cgatgacgcc
     3481 tcgaagttaa aaacgtggat tgagaaccaa ttgagattga cgacacattc agtggaaatg
     3541 aggcacctga ttctgaccca aggctagaaa cgccgcagcc attaaggaga gatgcggagc
     3601 tgccattttt tgaacctctt tcgctcgtgc ctctatgacg tcggagcctt tggtctgctc
     3661 caatcggcaa atctgcgacg ccgtacgatt ttgcactccg ccggttaggc cgccttcggc
     3721 ttatttacgg tctcgatgcg atcgagaatc ttgcctagat cgcgctttgc gacctgaaca
     3781 tcttagtcag attgagccaa agctgcgccg ttgtgccgaa ggctttgccg agccgaaccg
     3841 cagtatcggc ggtaatgccg gtctgttcgc tggcgatccg ctcgattcgg gttcgaggca
     3901 aaccgcagac cctggcaagc gcacccgccg acatcttcag cggaaccagg aactcctccc
     3961 gcagaacctc acccgcttct cggcaatcgt tgcgtcctct tctagtgata gtcgacgatc
     4021 tcgggctcta cttacgaaag gcgacctgcg ggcccgtttt ccggttgcac ttgacatagt
     4081 ccgtccaagg tcgccgacct gcgcattccc acagtcccgg acaagcgtcg cttcaaccaa
     4141 ggaggtctta tcggtgtggt agattcgcga tcgctcagtt atgatgttgc catgaggctg
     4201 ttgagcttaa gatctccttc gaaaacactc gcggtcaccg ctgttgcggc cagcctcgcg
     4261 acggctgccg atgcccaaag cctgcaggtg aacggaaaat tcgggtttct tggcgaatat
     4321 gagatttccg ccacggttgc gccggaaaca gagaacgcaa gcaggcaatt ctcgggtccc
     4381 atgctcgtga agcacgtcgg tatatgcacg catgatgggc gcgacgaaag ggacggccag
     4441 ctccggcttc agatgctctc ttatgcgcga gttcgagcga cactgttgtt ggatgggcat
     4501 gaatgcacgt ttaacggacg cttctctcac agagagttcg gtttgctcac ctgtcccaac
     4561 gaggcaacgg tcccgcttcg actttggctc aagcagtgac gcgctgcatc gcatggagcg
     4621 ccactatccc gcccaccgcc acggcgatgc cacatcctcg ccgcgccgcc ggttacaact
     4681 tcgcctcctc cggcagcggc gccgcggtca acgatcgaga atcgcggcgg cctgcggatc
     4741 aggcagcggc ggtattgtga ggagataagc gtagatatcg ccgaggtcca gatccgagag
     4801 tactgcgaca gtgtagggag gcatcacgtt gcgtggatgg cgtatcacgg ccgcgaaggc
     4861 ctcgtagggc atcggattcg gcgcgatgtg cggaccagtt gggcggctac cctggccgac
     4921 agtgccgtga cacaggtagc aaccgacgga catataaacg cgccttccgt tgacggcatc
     4981 gcccgcaggg gattgtgcgt gcgcggagga aatcaacgtg cacggcacca gcaccgccca
     5041 caagagcccc ttcgacatcg tgcgcctcag cgtccttgcg aaactacgtc tacgagcgcc
     5101 ggctcgccgc gcttgactat gtcgaccgcc tttttcagta ccggcccaag atccatgggg
     5161 tcggtgatcg gaccgaacga tgcg
//
LOCUS       DATILV010000987         3126 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_246756, whole genome shotgun sequence.
ACCESSION   DATILV010000987 DATILV010000000
VERSION     DATILV010000987.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3126
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_246756"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..195)
                     /locus_tag="VLJ17_23865"
                     /pseudo
     CDS             complement(1..195)
                     /locus_tag="VLJ17_23865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012045116.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
     gene            complement(274..1257)
                     /locus_tag="VLJ17_23870"
     CDS             complement(274..1257)
                     /locus_tag="VLJ17_23870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009467410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase family protein"
                     /protein_id="HSV26051.1"
                     /translation="MNVTILDDYHDTLRTLACFAKLADHKITIWNDHVQDINVLAERL
                     KETEALVLIRERTKIRGPLLERLPRLRLISQRSVWPHIDIDACSRLGIVVSSDARGDT
                     PSYATAELTWGLILSAVRQIPQQAAALKAGRWQIGVGTTLRGKTLGLYGWGRIAHAVA
                     DYGRAFGMNVMVWAREASRERARQEGFEVAANKAALFEQSDVLSLHMRLVDATRHIVT
                     AGDLARMKSTALLVNTSRAPLIEPGALVAALRAGRPGLAAVDVYEQEPLTDVADPLLL
                     LPNVLATPHIGYVTREDYEFQFAEIFNQIVAYAAGTPINVVNPDVFGRTRN"
     gene            complement(1406..2782)
                     /locus_tag="VLJ17_23875"
     CDS             complement(1406..2782)
                     /locus_tag="VLJ17_23875"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV26052.1"
                     /translation="MSDKADAQFRIGEAAWVVILMSVCFGFSYLDRNVLTILTQPIKH
                     SLSLSDTQLGVLGGFAFSVFFFLGGLPLAWLIDRTNRIRLTAACIFIWSVATVMSGLS
                     TGFTQLLVSRAFTAAAEAALIPAGLSIFADMLPVRRIPLASSVLMIGGFVGGGAALYL
                     GGTFLTYFSSPEAPHWFLPQLLPWQHVYLVIGLAGIVPVALLLLTTKEPARREILDVD
                     KEVNENAPPIREVFSYLFVESGFYAPFILGVCAIFVVFYSVNAWFPAFLIRRFALSAS
                     EAGTYLGPAFIVFGIAGSLGSQLFLRRLTPDNIVPRIVLLLGGICLVQIANLAALPFA
                     TSPSIAVCVYGIAVGVTGAVLSVMLVPIQLTVPNRMRGQTMSIAYCGVNLLGTGLGPF
                     LVGFLNERLFGGGATLGMCMAAISVSSATIATILFARSYFVFTRQRIAAKPTEIITSG
                     AQQASISS"
     gene            complement(2939..>3126)
                     /locus_tag="VLJ17_23880"
     CDS             complement(2939..>3126)
                     /locus_tag="VLJ17_23880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26053.1"
                     /translation="DPDLARAILAASQSVPHNVDSVERRSLARRQIHHQGADATEAAA
                     PTEQVERASFLFVMNRE"
BASE COUNT          717 a          872 c          941 g          596 t
ORIGIN      
        1 gggatccggc gcatcagctt cttcagccga tcagccagca catggcaggt aatcccgagc
       61 gaggcctcga aagcctcgaa ccgccgcttg cgcggaaaac attcgcgcag gatcaacagg
      121 ctccagcaat ttgccaatca cggcgacggt gcgggcgagc gagcacggtt cctcttcaag
      181 cgtattccac ttcatcaatg tcgccagtag cttcgcgcgc aagcagcgaa tccgagggca
      241 agcagcgaag catccataac tgcaaatcgt cttttagttt ctcgtccgtc caaaaacatc
      301 cgggttcacg acgttaatcg gtgtgcctgc tgcatacgcg actatttggt tgaagatctc
      361 ggcgaactgg aactcgtagt cttcgcgcgt gacgtagccg atgtgcgggg tggccagcac
      421 gttgggcagt agcaagagcg gatcggctac atcggttagc ggctcttgct cgtatacatc
      481 gacggcggcc aagcctggcc ggcccgcccg cagagcagcc accaatgcac cgggctcgat
      541 cagcggcgcg cggcttgtat tgaccagcag tgccgttgac ttcatgcgcg cgaggtcgcc
      601 agccgtgacg atgtggcggg tggcatcgac aagacgcatg tgtagtgaga gcacgtcgct
      661 ctgctcgaag agtgcagcct tgttagctgc gacctcgaag ccctcctggc gcgcgcgttc
      721 gcgagaggct tcgcgagccc aaaccatcac attcataccg aaggcgcgac cgtagtctgc
      781 gaccgcgtgc gcgatgcggc cccagccata gagaccaagt gtcttacctc gcagtgtggt
      841 gccaaccccg atctgccatc tccccgcctt aagtgctgcc gcctgctgtg gtatctggcg
      901 cacagccgag agaatcaacc cccacgtcaa ctcggccgta gcgtaggacg gcgtgtcccc
      961 acgtgcgtcg gacgagacga caatgccgag ccggctacag gcatcgatgt cgatatgcgg
     1021 ccacacgctg cgctggctga tgagccttag tctcggtagt cgctcaagga gggggccgcg
     1081 tatcttcgtg cgctctcgga tcaacaccag agcttcggtt tccttgagcc gctcggccaa
     1141 tacgttgata tcctgcacat ggtcattcca gatcgtgatt ttgtgatcag cgagcttggc
     1201 gaagcatgcg agcgtacgca aggtgtcgtg gtagtcgtcg aggatggtca cattcatgag
     1261 aactctccgg gccgtcggta ggagaaatga attcaacctt tcagattagt agtccctata
     1321 ccattcgatc ggtaactgat ctcgatcgca gggcttttca tccgcgtcgt gtttgcatgc
     1381 atcgagccgc cgaattccgc tagtttcacg atgaaatcga ggcctgctgc gcgccggatg
     1441 taatgatttc ggttggcttg gccgcaatac gttgccgcgt gaaaacaaag taagacctcg
     1501 cgaacagaat tgttgcaatg gtcgcggagg agacgcttat ggcggccatg cacatgccga
     1561 gcgttgcgcc gcctccaaaa agtcgctcat ttaggaagcc gactaaaaag ggcccaagac
     1621 ctgtaccaag caggttcacg ccgcaatagg cgatggacat cgtctgcccc ctcatgcggt
     1681 tgggcactgt cagctgaatg gggacgagca taacagagag aaccgctccg gtgacgccga
     1741 cggcgatgcc atacacacac acggcgatgc tggggctcgt tgcgaagggc aatgccgcaa
     1801 gattggcgat ttgaacgagg cagatgccac cgagcaatag cacgatccgc ggaacgatat
     1861 tgtcgggtgt gagccggcgc aaaaacagct gtgacccaag cgaaccggca atgccgaaca
     1921 cgataaaggc cggtccgaga tacgttccgg cctcggacgc agaaagcgca aaccgccgaa
     1981 tgaggaatgc cggaaaccat gcgttgacag agtaaaagac gacaaaaatc gcgcaaacgc
     2041 cgaggataaa gggggcgtaa aagcccgact ccacaaacaa gtacgagaac acctcgcgaa
     2101 tggggggagc gttctcgttt acctccttgt ccacatccag gatctctcgg cgcgccggct
     2161 ctttggttgt tagaagcaac aaagcaacgg ggacgattcc agcaagacca atcaccaaat
     2221 agacgtgttg ccacggaagg agctgtggca gaaaccaatg gggggcttct ggagagctga
     2281 aataggtgag gaaagtgcca ccgagataga gtgccgcgcc gccaccgaca aatccgccga
     2341 tcatcaaaac cgaactagcg agtggaatgc gtcggacagg tagcatatct gcgaatatgg
     2401 ataagccagc gggaatgagc gccgcttctg ctgcggctgt gaacgctcgt gaaaccagga
     2461 gctgtgtgaa gccggtcgac aagccgctca taaccgtggc gacgctccag ataaagatgc
     2521 aggccgcggt caggcggatc cggttggtcc gatcgatcag ccacgccagc ggcagccctc
     2581 caagaaagaa gaagaccgaa aaagcaaacc cgccgagcac gcccagttgt gtgtcgctta
     2641 gcgaaagaga atgcttgatg ggttgcgtca gtatcgtgag tacgtttcga tcaaggtagg
     2701 agaagccaaa gcatacggac atcagaatga cgacccaggc ggcttctcca attcgaaatt
     2761 gtgcgtcagc cttatccgac atgtttcctc tggtcttggc cgccgggtca aaatttgggg
     2821 ctgacgtctg cggcaggagc agctccgttt tgcgcgatcg gaccagcttc tcacggcccg
     2881 ttgtctggaa gggtgagcta ggagctggcg aagaacaatg acgaaagcgt tgtttctgtt
     2941 attcgcggtt catcacgaac aggaaagatg cgcgctcgac ctgttctgtt ggggcggccg
     3001 cctccgttgc atccgcgcct tgatggtgga tctgtctgcg cgcaagggag cggcgttcga
     3061 cgctgtcgac gttgtgcggc actgactggg aggccgccag gattgcacgg gcaagatcgg
     3121 gatcat
//
LOCUS       DATILV010000988         1671 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2042066, whole genome shotgun sequence.
ACCESSION   DATILV010000988 DATILV010000000
VERSION     DATILV010000988.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1671)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1671)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1671
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2042066"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(230..937)
                     /locus_tag="VLJ17_23885"
     CDS             complement(230..937)
                     /locus_tag="VLJ17_23885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015930707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HSV26054.1"
                     /translation="MASMAPHLAEVANLVGDLARANILSALMDNRALTAKELAFAGRV
                     SPQTTSSHLAKMTDAKLLQVCKQGRCRYYRLASPLVAQMLEAVMVVAADKLPRLPPSS
                     KPAEELRAARSCYDHLAGRLGVALADALTARGFIILEPEGAQVTGRGMDFFDELGLEI
                     NLLPKGRRPFCRPCLDWSERRYHVAGRLGALLLGFCLDHRWLERRNDSRALQITELGA
                     RQFEDVFQIEHPPLAIV"
     gene            complement(1035..>1671)
                     /locus_tag="VLJ17_23890"
     CDS             complement(1035..>1671)
                     /locus_tag="VLJ17_23890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010686871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HSV26055.1"
                     /translation="YLGNAKMLRPELEQVDGFVDNIRYRSLTREGWILSLSGWRDEKS
                     VVRWRTRMRHHEVQEKGRSEILLDYHLRVGQLTQDTRLPEGYALHEQRLDETEVGAGT
                     TVTLIDAKRPPEWVKAISPEDVAKWLGLAPNASGLVAWDVFDAVLMPGEIILLMSWRD
                     HSTAEAFEGKVSLQDGARLRRVRVVRDYGMFDRREAPQYYPDITRSTTERP"
BASE COUNT          360 a          496 c          478 g          337 t
ORIGIN      
        1 tgtcgtattc ggcttcacga tcacgcgcga gaagatcgtc gaaatcaaca tgctcgccga
       61 ccccgagcgt ctttgccagc tcgacttgaa gatcctcaac gactgacgag ccaatctagt
      121 tgcggctcag gtcaggctgg cagggagggt ccgatcaaca agatttttcg ggggaggaga
      181 cgctctgtcg gattatcagt tcggcgggcc aagtgacgat cgaaagcatt taaactatgg
      241 ccaatggcgg atgctcgatt tgaaatacgt cctcgaattg ccgcgccccg agttcggtga
      301 tttgcagcgc gcggctgtcg ttgcgacgtt caagccagcg atggtccaaa cagaatccga
      361 gaagaagcgc accgagacgg ccagccacgt gataacgccg ctcgctccag tccaaacagg
      421 gccggcagaa tggtcgcctg cctttcggaa gtaagttgat ttcgagccca agttcgtcaa
      481 agaaatccat tccgcgtccc gtgacctgcg ctccttcggg ctcgagaata ataaagccgc
      541 gcgccgtaag cgcgtcggcc aaagcgacgc ccaaacgtcc cgcgagatgg tcgtaacagc
      601 ttcgtgcagc tcgtaactcc tcggcaggtt tcgatgacgg cggtagacgt ggaagtttat
      661 cggcggccac caccatgacc gcttcgagca tttgtgccac cagcggtgat gccaaccgat
      721 agtagcgaca tcgtccctgc ttacagactt ggagtagctt cgcatccgtc atcttggcaa
      781 gatgagagct ggtcgtttgc ggtgagacgc gccccgcaaa cgccagctcc ttggcggtca
      841 gagcacggtt gtccataagc gctgaaagaa tgtttgcgcg cgcgagatcg cctaccagat
      901 ttgcaacctc tgcgagatga ggagccatcg aagccatagc gtaacctcca tatctcaatt
      961 aattttcgcc tttttatcga tcagcgcgat ggggggcggg cccgcagcca atctattcgg
     1021 ctggtgttgg gtcgtcatgg acgctccgta gtggagcgcg tgatgtcggg gtaatattgt
     1081 ggcgcttcgc gccgatcgaa catgccgtag tcgcgcacca cacgaacgcg acggagcctc
     1141 gcgccatcct gcaacgagac tttaccctcg aaggcttcag cggtggaatg gtcacgccag
     1201 gacatgagca agatgatctc accgggcatc agaacggcgt caaaaacatc ccaggcgaca
     1261 agacctgaag cattgggcgc gaggcccaac cacttagcga catcctcagg actgattgcc
     1321 ttaacccatt ccggcggccg tttggcgtcg atcaaggtca ccgtggtgcc ggcgccgacc
     1381 tcggtctcgt ccagcctctg ctcatgcagg gcatagccct cgggcaacct ggtgtcctgc
     1441 gtcaactggc cgaccctcaa gtgatagtcc aacaggattt ccgagcggcc cttctcctgg
     1501 acttcgtggt gccgcattcg cgtacgccag cggaccacgg acttctcatc gcgccaaccc
     1561 gaaagcgaga gaatccaccc ctcgcgggtg aggctgcggt agcggatatt gtcgacaaat
     1621 ccatccacct gctccaactc gggcctgagc attttggcat tgccgagata g
//
LOCUS       DATILV010000989         6585 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4853780, whole genome shotgun sequence.
ACCESSION   DATILV010000989 DATILV010000000
VERSION     DATILV010000989.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6585)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6585)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6585
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4853780"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1225
                     /locus_tag="VLJ17_23895"
     CDS             <1..1225
                     /locus_tag="VLJ17_23895"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSV26056.1"
                     /translation="VAAAPDHPVYIQLFYSAALLNPAGFKALNIANDADVAPGGKIER
                     DATGKPTGWINGDNPTITALFDKLPLPSFEESVAGTRQFFRELNRLGLTGVSDPGGFN
                     LTPASYLPLFRVWQDRALTVRVVFSLFSQRRGRELEDYQNLTQMLAMGFGDDMLRFNG
                     IGENVTWGMYNNDNPTEAQKQQYYEVAKWAASRGMTLTQHWSSDVSVHHLLDVFERVN
                     RDTSIASLRWSIAHLNDGSIASFQRMKALGVGWLMQDAIYFGGDALIRTRGLEIAKHT
                     PPIKTAMNIGIHVGGGTDAHRVMSYNPFVSLQWMIDGKTVAGTPTRNADELPSREEAL
                     RLYTQGSAWFTHDDGRRGALTVGRLADLAVLTKDFASVPTDEISGIESLLTMVGGRII
                     YAAGPFATLEERAGK"
     gene            complement(1341..1793)
                     /locus_tag="VLJ17_23900"
     CDS             complement(1341..1793)
                     /locus_tag="VLJ17_23900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018431058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HSV26057.1"
                     /translation="MLTLAQANRIIEAILARGDELQCRPLSVIVVEPGCKVKAFQKAD
                     GSSMIRFEMAFGKAYAALALGRSSRLVRIRNEEKPAFMRYLIAASDDQIFPEGGGMQI
                     RDAEGHVIGAVGVTGDTEERDEELAVHGIHAAGLKTDVDCRDVRLTDK"
     gene            complement(1797..2669)
                     /locus_tag="VLJ17_23905"
     CDS             complement(1797..2669)
                     /locus_tag="VLJ17_23905"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004664 - prephenate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009094 - L-phenylalanine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HSV26058.1"
                     /translation="MIAPVPRPKIVFQGEPGANSHIACREAYPDAEPVPCPTFEDALN
                     AVTSGEVELGMIPIENSVAGRVADIHHLMPGAGLHIVAEWFLPIRNQLMGLKGVKLSE
                     IKSVESHIMALGQCRGYIRKLGVRSVVTADTAGAARDVAERGDRSRAAIASSLAAEIY
                     GLDILAKNIEDASHSTTRFIVLSREANWPPRHNGPVLTTFVFQVRNIPAALYKALGGF
                     ATNGVNMTKLESYMLEGTFSATQFYSDVEGHPDDPGLKLALEELAFFSHPTSLRILGV
                     YPANPFRATLGSGK"
     gene            complement(2686..3429)
                     /locus_tag="VLJ17_23910"
     CDS             complement(2686..3429)
                     /locus_tag="VLJ17_23910"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008690 - 3-deoxy-manno-octulosonate
                     cytidylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HSV26059.1"
                     /translation="MSKGVTIFIPARMASTRLPGKPLADIAGRPMIAHVLERATAAHL
                     GPVFVATDSEEVAAAVAKAGGRAVMTRADHASGSDRIFEAMEQIGFGADIIVNIQGDL
                     PTIDPADIRAALVPLGDPSVDIVTLAAEIRRTEERTNPNVVKVVGTPVGNAAGTGRLR
                     ALYFTRATAPHGDGPLYHHIGLYAYRRAALEKFVRLPPSPLELREKLEQLRALEAGMR
                     IDVAIVASVPLGVDTPDDLEMARAVLAQT"
     gene            3533..4081
                     /locus_tag="VLJ17_23915"
     CDS             3533..4081
                     /locus_tag="VLJ17_23915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018646575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c family protein"
                     /protein_id="HSV26060.1"
                     /translation="MDSFEFNKIAGAFLATGLCLVALNITAEAIFAPHHPAKPGFEIE
                     IKPQASATSPGSNAAPEEPIEKLLASATVERGESAARPCSTCHTFQKGGANGQGPNLY
                     GIVGRPKAAEPGFNYSDAMKAKGGAWTVEDLNKFLTSPREFIPGTKMTFSGFARGSQR
                     ADTIAYLNSLADNPKPLPVAKQ"
     gene            4285..6114
                     /locus_tag="VLJ17_23920"
     CDS             4285..6114
                     /locus_tag="VLJ17_23920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018646576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSV26061.1"
                     /translation="MFAAHAPAQEKTQEKSWRHGLSLFGDIKYPSDFKHFEYVNPNAP
                     KGGAVRQVGLGTFDNFNPVVAGVKGVLALGLGRVFDSLTTPSLDEPATEYGLLAESVS
                     HPDDFSSVTYRLRSTARWQDGKPVTPDDVIFSFNAFKTYHPTQSAYYQHVTKAEQTAD
                     REVTFTFDSAGNRELPQIVGQLVVLPKHWFEDADKAGNKRNIANGTLEPPLGSGPYRI
                     KEFEPGRAIVYERVKDYWGKDLPVNIGRSNFDEVRYDYYRDATVALEAFKADRLDWRN
                     ENVAKNWATAYDFPAVAAKRVVLEEFPIRDIGWGQFFAFNIRREKFADPRVRRAFDLA
                     FDFEEMNKQLFSGQYHRVASYFEGTELASSGLPSGLELQILETVRGEVPPEVFTTEYK
                     NPVNGNPEAARANLREATRLLREAGWEVRNQKLVNVKTGEPMTVELLNSTSDPPRERA
                     FLFLKPSLERLGITVTIRSVDDTQYENRTRNWDYDIISEGWLQSLSPGNEQRGFWGSK
                     AADQVGSRNAVGIKNPAVDKLIDRVIFAKSREELVAATRALDRVLLWNHYAVPEWTLL
                     KWRIARWDRFGHPDKLPDYGAQAGFPDIWWWDAAKAAKTGGRQ"
     gene            6111..>6585
                     /locus_tag="VLJ17_23925"
     CDS             6111..>6585
                     /locus_tag="VLJ17_23925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV26062.1"
                     /translation="MSRPSHKSLSRRRVLVLSAGAMTAPGWLRFVDSAALAADETETH
                     GISAFGDLKYPPNFKHFDYVNPDAPKGGAFSETVTTRQFNQNFLTFNSLNSFILKGDA
                     ARAMELTFASLMSSAEDERDAMYGLAADKVRISADGLVYRYHIRPEARFHDGSKLT"
BASE COUNT         1314 a         2069 c         1974 g         1228 t
ORIGIN      
        1 tgtggccgcg gcgcccgacc accccgtata tattcagttg ttttattcgg ccgcgttgct
       61 caatcccgcg ggcttcaagg cgctcaatat tgcgaacgac gccgacgtgg cgcccggcgg
      121 caagatcgaa cgggacgcca ccggcaaacc gaccggctgg atcaacggcg acaaccccac
      181 catcacggcg ctgttcgata agctaccgtt gccatccttc gaggaaagcg tcgcgggcac
      241 gcggcaattc ttccgcgaac tcaaccggct cggcttgacc ggcgtcagcg accccggcgg
      301 cttcaatctc acgcccgcga gctacttgcc gctgttccgg gtctggcagg accgcgcatt
      361 gacggtgcgg gttgtcttca gtcttttctc gcagcgccgg ggcagggagt tggaggacta
      421 ccagaacctc acccagatgc tggccatggg tttcggcgac gacatgctac gctttaacgg
      481 tatcggcgag aacgtgacct ggggcatgta caacaacgac aatccgacgg aagcgcagaa
      541 gcagcaatat tatgaagtgg ccaaatgggc ggcatcgcgc ggtatgacgc tgacacagca
      601 ctggagcagc gacgtctcag tccaccatct gctcgacgtg tttgagcgcg tgaaccgcga
      661 cacttcgatc gcaagcctgc gctggtcgat cgctcatctc aatgacggct cgatcgctag
      721 ctttcaacgc atgaaggcac tgggcgtcgg ctggctaatg caggacgcca tatatttcgg
      781 cggcgacgcg ctcatcagga cgcgcggcct cgaaatcgcc aagcataccc cgccaatcaa
      841 gaccgcgatg aatatcggca tccacgttgg cggcggcacc gatgcgcacc gtgtgatgtc
      901 gtacaatcca ttcgtctcgc tgcaatggat gatcgatggc aagacggtcg ccggtacgcc
      961 gacgcgcaac gctgatgaac tgccgagccg cgaggaagct ctgcggctct acacccaagg
     1021 cagcgcatgg tttacccacg acgacggccg gcgcggtgcg ctgacggtcg gccgactcgc
     1081 cgacctcgca gtgctgacga aggatttcgc cagcgtgcca acggacgaga tcagcggcat
     1141 cgaatcgctc ctcactatgg tgggaggccg gatcatctat gcggcggggc cgtttgcgac
     1201 gctggaggag agagccggga agtgagacgg ggccggccgt ctcagtattc tttaacttac
     1261 gaaattctcc aagaaaggga gatcgcgttt ttctttgccc aaatagcgtg tcgtttggtt
     1321 cgtcggcagc ctgcggccgc tcacttgtcc gtcagccgca cgtcccggca atccacgtcg
     1381 gtcttgagac ccgccgcatg aatgccgtgc accgcgagtt cctcgtcgcg ttcctcggta
     1441 tcgcccgtca cccccaccgc accgatgaca tggccttcgg catcgcggat ctgcatgccg
     1501 cccccctcgg ggaagatctg gtcgtcactc gctgcgatca aatatcgcat gaaggccggc
     1561 ttctcctcat tgcggatgcg cacgagcctt gaagaacggc ccagcgccag cgccgcataa
     1621 gccttgccga acgccatttc gaagcggatc atcgaggagc cgtccgcctt ctggaacgcc
     1681 tttaccttgc acccaggctc gaccacgatc acggacagcg gccggcactg caactcgtcg
     1741 ccgcgcgcca gaatcgcctc gatgatgcgg ttggcctgtg ccaaggtgag catctgctac
     1801 ttccccgacc caagggtggc gcgaaacgga ttggccgggt agacgccgag aatcctcaac
     1861 gatgtcggat ggctgaaaaa cgccaactct tcgagcgcaa gcttgaggcc cgggtcgtcc
     1921 ggatgtccct cgacatcaga atagaactgg gtcgccgaga acgtcccctc aagcatgtag
     1981 ctttcgagct tagtcatgtt gaccccgttg gtggcaaagc cgccgagcgc cttgtagagc
     2041 gcggccggaa tattgcgtac ctggaacacg aaggtcgtca gtaccgggcc gttgtggcgg
     2101 ggcggccaat tggcctcgcg cgaaagcacg atgaagcgcg tagtcgaatg ggaggcatct
     2161 tcgatattct tggcgagaat atcgagccca taaatttccg cagcgaggct tgaggcgatt
     2221 gccgcgcgac tgcggtcccc tcgctccgca acgtcgcgcg ctgcaccagc ggtatcggcc
     2281 gtcaccacgc tcctaacacc gagcttacgg atgtatccgc gacattggcc aagcgccatg
     2341 atgtggcttt cgaccgattt gatttccgag agcttgacac ccttgagccc catgagctgg
     2401 ttgcggatcg gcaaaaacca ttcggcgacg atgtgcagcc cggcgcctgg catcaagtga
     2461 tgaatgtcgg cgacccggcc ggcgaccgaa ttctcgatcg ggatcattcc gagttcgact
     2521 tccccactcg tcacggcatt gagcgcgtcc tcgaatgtgg ggcacggcac cggctcggca
     2581 tccggatagg cctcccgaca ggcaatgtgc gagttcgctc caggctcgcc ctggaagacg
     2641 attttcggtc gagggactgg cgcgatcatg cggaatcctg tgcgatcaag tttgcgccaa
     2701 tacggcgcgg gccatttcga gatcatccgg cgtgtcgacg ccgagcggga ccgaagccac
     2761 gatcgcgacg tcgatccgca tgccggcttc aagcgcgcgc aactgttcga gcttttcgcg
     2821 cagctcgagc ggcgatggcg gcagccgaac gaacttttca agcgccgctc ggcgataggc
     2881 gtaaagtccg atgtgatggt agaggggccc gtccccgtgg ggcgcggttg cgcgggtgaa
     2941 atagagcgcc cgcagccgac cggtaccggc cgcgtttccg accggcgtac ccacaacctt
     3001 gaccacgttg ggattggtgc gctcctcggt gcgacggatt tcagccgcaa gggtcacgat
     3061 atcgactgac ggatcaccca gcggcaccag ggccgcccgg atatcggctg gatcaatcgt
     3121 cggcagatcg ccctggatgt tgacaatgat gtcagcgccg aagccgattt gctccatcgc
     3181 ttcaaagatg cggtcggagc ccgaagcatg atcggcccgg gtcatcacgg cccggccgcc
     3241 ggctttggcg actgctgcgg cgacttcttc tgaatctgtt gccacgaaga ccggcccaag
     3301 gtgggctgcg gtggcgcgtt ctaatacatg ggcgatcatt ggccgcccgg cgatatctgc
     3361 cagcggcttg ccgggcagcc gcgtcgacgc catacgggcc ggaatgaaga tggtgacgcc
     3421 tttcgacatg aggtgcgctt atacgtgttg ccagggcaga ggcaaaccgg ttatctctgc
     3481 cccgcagcac gcgcggttat cgcgccagat ctgatgtcgg aacccttagg cgatggactc
     3541 cttcgaattc aacaagatcg ccggcgcatt tctggcgacc ggcctgtgcc tggtggctct
     3601 gaacatcaca gccgaggcga tttttgcgcc ccaccacccg gcaaagcctg gcttcgagat
     3661 cgaaatcaag ccacaggcgt cagcgaccag tccaggctcc aatgccgccc cggaggagcc
     3721 gatcgaaaag ctgcttgcca gcgccacggt cgagcgcggc gagtccgccg ccaggccatg
     3781 ttccacgtgt catacgttcc agaagggcgg cgccaacggc cagggcccca atctttatgg
     3841 catcgttggc cgtccaaaag ccgcggagcc cggattcaac tactctgatg ccatgaaggc
     3901 aaagggtggg gcgtggacgg tcgaggatct gaataaattc cttacaagtc cgagggaatt
     3961 cattcccggc accaagatga ctttctcagg ttttgcccga ggcagccaac gcgctgatac
     4021 gattgcctat ctcaattcgc tcgctgacaa tccgaagccg ctgccggtgg ccaaacagta
     4081 accacgggaa tttgaacccc agcggccatt ggacgccttg cggcacggtg gcgccgcgtt
     4141 cgaaaaccac ataatagcct ctgacctgtt tcgcacctgc ccgcaagggt aaggggctac
     4201 ttcgattgac cgaaggagag ttggttgagc accaagtcct cgtggcgcgc ctgcgctgcc
     4261 gccgttctga tcgccacccc cgtcgtgttc gccgcccatg cgccggctca ggaaaagact
     4321 caagaaaaaa gttggcgaca tgggctgtcg ttgttcggtg acatcaaata cccgtccgac
     4381 ttcaagcact tcgaatacgt caatccgaac gcccccaagg gcggcgctgt gcgccaagtg
     4441 ggcctcggca cattcgacaa tttcaacccg gtcgtcgccg gggtaaaggg tgtgctggcg
     4501 ctcggtctcg gccgcgtgtt cgattccctg acgacgccgt cccttgatga acccgccacc
     4561 gagtacgggt tgctcgccga aagcgtcagc catcccgatg atttctcctc cgttacctac
     4621 cgtctgcggt ccactgcccg ctggcaagat ggcaagccgg tgaccccgga tgacgtcatc
     4681 ttctccttca acgcattcaa gacctaccat cccacacaat cggcctacta ccagcacgtg
     4741 accaaagctg aacaaaccgc cgatcgcgag gtcaccttca ctttcgattc tgccggtaat
     4801 cgtgagttgc cgcagatcgt cggccagctc gtagtgctgc cgaagcactg gttcgaagac
     4861 gccgacaagg ccggcaacaa gcgcaacatc gcgaacggca ccttggagcc gccgcttggc
     4921 agcggcccct accggatcaa ggagttcgag ccaggccgcg cgatcgtcta tgagcgggtc
     4981 aaggactatt ggggcaagga cctgccggtg aatatcgggc gcagcaattt cgatgaagtt
     5041 cgatacgact attaccgcga cgcgacggtg gccctcgaag ccttcaaggc cgaccggctc
     5101 gactggcgca acgagaacgt cgcaaagaac tgggcgacgg cttacgattt ccccgcagtg
     5161 gccgccaaac gcgtcgtgct ggaagaattc ccgatccgcg acatcggctg gggtcagttc
     5221 ttcgccttca acatcaggcg cgaaaagttc gctgatccgc gggtgcgccg cgcgttcgac
     5281 ctggcgttcg atttcgagga gatgaacaaa cagctctttt ccggccaata ccatcgcgtt
     5341 gccagctatt tcgaaggcac cgagctggca tcgtcggggc tcccatcggg cctcgaactg
     5401 caaattttgg aaacggtccg cggtgaagtg ccgccggagg tgttcaccac cgaatacaag
     5461 aacccggtga acggcaatcc agaggcggcg cgcgccaacc tgcgcgaggc aactcggctg
     5521 ctacgcgaag cgggctggga agtccgcaac cagaagctcg tcaacgtcaa gaccggcgag
     5581 ccgatgaccg ttgaattgct caactcgacc tccgatcccc ctagggagcg cgcgtttctg
     5641 ttcttaaagc cttcgctgga acgtctgggt atcacagtca cgattcgcag tgtcgacgat
     5701 acgcaatacg aaaaccgcac gcgaaattgg gattacgaca tcatctccga agggtggttg
     5761 cagtcgctgt cgcccggcaa cgagcaacgc ggcttctggg gctcgaaagc cgccgaccag
     5821 gtgggctcgc gcaatgcggt cgggatcaag aatcccgcgg tcgacaagct catcgatcgc
     5881 gtcatcttcg ccaaaagccg cgaggagctg gtcgccgcca cccgggcgct cgaccgcgtg
     5941 ctgttgtgga accattatgc ggtgccggaa tggacgcttc tcaagtggcg gatcgcgcgc
     6001 tgggaccgct tcggccatcc ggacaagctg cccgactatg gcgcgcaagc tggtttcccg
     6061 gatatatggt ggtgggacgc tgccaaagcg gccaagacag gaggccgcca atgagccgcc
     6121 caagtcacaa atcgctttcg cgccgtcgcg tactcgttct ctccgccggg gcaatgacgg
     6181 cacccggctg gctgcgtttt gtggattccg ccgcccttgc ggccgacgag accgagaccc
     6241 acggcatttc ggccttcggc gacctcaagt acccgccgaa cttcaagcat ttcgactatg
     6301 tcaatccgga cgcgcctaag ggcggcgcgt tttccgaaac ggtcacgacc cgacagttca
     6361 atcagaattt tctcaccttc aactccctca acagcttcat cctcaagggc gacgccgcga
     6421 gggcgatgga gttgaccttc gcgagcctga tgagctcggc cgaagacgag cgggatgcga
     6481 tgtacggtct tgctgcagat aaagtccgca tttcggcgga cggccttgtg tatcggtatc
     6541 atatccggcc agaggcgcgc ttccacgacg gcagcaagct caccg
//
LOCUS       DATILV010000990         5670 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_5100158, whole genome shotgun sequence.
ACCESSION   DATILV010000990 DATILV010000000
VERSION     DATILV010000990.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5670
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5100158"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..274
                     /locus_tag="VLJ17_23930"
     CDS             <1..274
                     /locus_tag="VLJ17_23930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018242460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSV26063.1"
                     /translation="TAASSARLYWENGARGSVIVAAAQKTGEIALPVAITVFPEDVYR
                     PPETWARRAYRNLIYFHEVDKGGHFAAWEQPELFSAELRAAFRSLR"
     gene            402..803
                     /locus_tag="VLJ17_23935"
     CDS             402..803
                     /locus_tag="VLJ17_23935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003528667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSV26064.1"
                     /translation="MKAAQMMAVTVLTVVSGLVTHMAQAQQPGTKRTDLQRHDLSISG
                     RDAIQIRVDIGPGEVAARRSHPGEEIIYVLEGTLEYEVEGKPPVTLKAGDVLFIPYGT
                     IHAAKNVGSVNAAELATYVVEKGKSLVELVK"
     gene            874..1989
                     /locus_tag="VLJ17_23940"
     CDS             874..1989
                     /locus_tag="VLJ17_23940"
                     /inference="COORDINATES: protein motif:HMM:NF037020.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HSV26065.1"
                     /translation="MKTNKLLVAAVLAIAIGVPIVGFVGDINMAQPTTSTVERAAFFH
                     GLAGPTANQSELASVERANEWLNSPPLTASALRGKVVLVDFWTYTCINWLRTQPYLRA
                     WAEKYKDKGLVVIGVHTPEFRFEKNIDNVRREVKALRVDYPVAVDSEYVIWRAFNNNY
                     WPALYFIDAQGHVRHYHFGEGSYEQSEMVIQRLLAEAGASGIGDDLVSVDARGFEAAA
                     DWASLKSPENYVGYERTEGFASPGGAIRDKSRMYELPARLRRNDWALSGDWTIKRDAV
                     ELNKPNGRIAYRFHARDLHLVMGPSTPGTSVKFRVLIDGQPPGAAHGIDIDEQGVGTV
                     TEQRLHQLIRQTGPIADHQLEIEFLGPGVEAFCFTFG"
     gene            2013..2354
                     /locus_tag="VLJ17_23945"
                     /pseudo
     CDS             2013..2354
                     /locus_tag="VLJ17_23945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010914238.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
     gene            3111..4394
                     /locus_tag="VLJ17_23950"
     CDS             3111..4394
                     /locus_tag="VLJ17_23950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010683964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV26066.1"
                     /translation="MTSAPEAKNYSGTELTSWYRELAPNEKRTFWACFGGWALDGMDV
                     QILSFGIPAITAAFAINNADAGLIGTVTLLTSAFGGWTAGMLADRIGRVRTLQIAIVW
                     FAFFTFLCGFAQDYVQLLVLRALMGLGYGGEWAAGAVLIGEVIRAQHRGKAVGSVQSG
                     WAIGWGVAALMSMVFFTLLPQDMAWRALFWIGLLPAFFVFFVRRFVTDPPVFKVAQER
                     IANGHPRASVLDIFSPAMIKTTILTSLLTTGAQGGYFALFTWLPTYLKVERNLSVIGT
                     GGYIAIVILGSFVGYLVSAYLADRIGRRPNFILYAVSSVVTVIVYLLLPINDTMMLML
                     GFPLGFFASGIFSGMGPFLTENFPTRVRGSGQGFTYSFGRGGAALNPTFVGMLSATLP
                     LGQSIAIFALGAYGLVVIAALLLPETRGRELTPDA"
     gene            complement(4745..5068)
                     /locus_tag="VLJ17_23955"
                     /pseudo
     CDS             complement(4745..5068)
                     /locus_tag="VLJ17_23955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495510.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
     gene            complement(5277..>5670)
                     /locus_tag="VLJ17_23960"
     CDS             complement(5277..>5670)
                     /locus_tag="VLJ17_23960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSV26067.1"
                     /translation="SIPKMLGTKTDGEGRALVDPFLKVMDTHGVFVVGDAAAVMQKGH
                     PVPGVAQAAFQEGRYVGRLIAKELKGKKVKRPFHYFDKGNMVVVGKNYAVLERGWLRT
                     SGFLTWLVWAFVHILFLPQLQNRLRVQR"
BASE COUNT         1121 a         1684 c         1687 g         1178 t
ORIGIN      
        1 caccgcagcc tcgtcggcgc ggctgtactg ggagaacggc gcacgcggca gcgtcatcgt
       61 cgcggccgcg cagaagaccg gcgagatcgc gctgccggtc gccatcacgg tatttccgga
      121 ggacgtctat cgccccccgg agacatgggc tcggcgcgcc tatcgcaacc tgatctactt
      181 ccacgaggtc gacaagggcg gacatttcgc cgcgtgggaa cagcctgagc ttttcagcgc
      241 cgagctgcga gccgccttta gatcacttcg gtagttacgc gccttagcgg gagtctttgg
      301 agattcgaca atgaaggggc cgttctattc gcggagatcg cggcgccgcc catgaatgct
      361 ctgggcccag gactcgtttc gaaggacaaa cggaggtctg catgaaagcg gctcaaatga
      421 tggcggtaac ggtactgacg gtcgtaagcg gattggtgac gcacatggcg caggcgcagc
      481 agccggggac gaagcgtacc gatctccagc gacacgatct cagcatctct gggcgcgatg
      541 ccatccagat ccgcgtcgac atcgggccgg gagaggtggc cgccaggcgc agtcatccgg
      601 gtgaagagat catctatgtc ctcgaaggca cgctggaata tgaggtcgag ggcaagccac
      661 cggtgacgct caaggctggt gacgttttgt tcatcccgta tggaacgatc catgcggcaa
      721 agaatgtcgg cagcgtcaac gctgcggagc tcgccacgta tgtcgtcgaa aagggcaaat
      781 cgctcgtcga gctggtcaag tgagcaccat tacgcgcgcc gacttcccgt gcacacgcgg
      841 ctacatcgat cgaaatccag aaggcattcg tcgatgaaaa caaacaagct cttggtagcc
      901 gcggtactcg caatcgcaat cggagtcccg attgtgggct ttgtggggga catcaacatg
      961 gcgcagccga cgacatccac ggtcgaacgg gccgcatttt ttcacgggct tgccggcccg
     1021 actgccaatc aatccgagct cgcctccgtt gagcgcgcga acgagtggct taattctccg
     1081 ccgctgacgg cgtcggcctt gcgcggaaag gtcgtcctcg tcgatttctg gacctatacc
     1141 tgcattaact ggttgcgcac ccagccctac cttcgcgcct gggcggagaa atacaaagac
     1201 aagggattgg tcgtgattgg cgtccacacg ccagaattcc gatttgaaaa gaacatcgac
     1261 aacgtccgcc gagaggttaa agcgctgcgg gtcgactatc ctgtcgccgt ggacagcgag
     1321 tatgtcatct ggcgcgcctt caacaacaat tattggccgg cgctgtattt catcgatgcc
     1381 caagggcacg tccggcacta tcatttcggc gagggatcgt acgaacaatc ggaaatggtc
     1441 attcagcgct tgctggccga ggccggagcc agcggcatcg gcgacgacct ggtgtctgtc
     1501 gatgcgcgcg gtttcgaggc ggccgccgat tgggcgagcc tcaagtctcc ggaaaattat
     1561 gtcggctatg aacgtaccga gggctttgcg tcaccgggcg gcgcgatccg cgacaaatct
     1621 cgcatgtatg aactgccggc acggctacgc cggaacgatt gggcgctgtc tggcgattgg
     1681 acgataaagc gcgacgccgt cgaattgaac aagcccaacg gccgcatcgc gtaccgcttt
     1741 cacgcgcgcg accttcatct cgttatgggc ccgtcaacgc caggaacgtc cgtaaaattt
     1801 cgtgtgctga tcgacggaca gccgccaggt gcggcgcacg gaattgacat tgacgaacag
     1861 ggcgtcggca cggtgaccga gcagcgtctg caccaattga tccggcaaac cggaccaatt
     1921 gccgatcatc agttggaaat cgaatttctt ggtccgggcg tggaggcttt ttgcttcacg
     1981 ttcggctaat ccgtcgcgaa agtcgaccac cgctcaaccg aatggtcggc cgggaggacg
     2041 acgttctcaa gttgtcggct gaactgaccg cttcgcgctt cgtcaccatc gtcggggctg
     2101 gtggcgtcgg caagacgacc gtcgcggtcg ccgtcgcaca tcacttgacg gccgctttcg
     2161 cgggttctgt cctctcttcg tcgatcttgg aatgttaagc gatccaaaac tcgcagcaac
     2221 ggctgtcgcc tccatgctgc gacaagcgca ttcttctgat tctcgatacc tgcgaacatc
     2281 tcgtagaggc gattgccgcg ctggcggcaa gcatcatgga ggccgcgccg caagtccata
     2341 tcctcgcgac aagccccatg gtcacgttcc gggcgatttg cttcatccac ggctcatccg
     2401 gctgaacggt gattccggcg atatccaccc ggcggttttc atgatggata aaaaacagca
     2461 cgtagtaggt cgcgagcccg cgcagcgtca gcacctccgc cgtgaaaaag tcggtccccg
     2521 ccaacagcgc caggtgggtc cgaatgaagg ccggccatgt ggtcgtccgc ttgcgctccg
     2581 gcgcgggcgg cacaccgtgg cgtcgcagaa catttcccac cgtttggtcg gagacagctg
     2641 agggtacatg tcaatatatt tgttatttat tataaatatc aacatgttac gtcaaattct
     2701 ggcggaggga gaagaacccg aaactaacat tctccgggtg ttgctgcgca atcgtgcgaa
     2761 gtactgcgaa gcggatcggg ggcgaaattt gtggcggctt atccgtttat gctttgtcat
     2821 tttcttgtgt ggtcgtggcc ggccttcccg accgtaatca gcagctcgtc gacatcggag
     2881 cgatggatgt cgatgagcaa agagcgcgcg gcgcctgcaa gatactctca ctagaagccc
     2941 gatccagtga agcagaccgc gtgaattaag aatgctaaag aatcgcaaat cgacccgaag
     3001 cattctcggc caccgctgcg tcggtgtaag cctgcggcca ccccatgcgt ttgcaactgg
     3061 gcgatcgcgt cgcgatcagg ccgccaagga gcatgatacc ggagctggcg atgacctctg
     3121 cgccggaagc aaaaaactac tcggggaccg agctgacctc ctggtaccgc gaacttgctc
     3181 ccaacgagaa gcgcacgttc tgggcctgtt ttggcgggtg ggcgctcgat ggaatggacg
     3241 ttcaaatctt aagttttgga atacccgcca tcaccgcagc ctttgcgatc aacaacgccg
     3301 atgccgggtt gatcggcaca gtgacgctgc ttacgtcggc attcggcggc tggactgccg
     3361 gcatgctggc ggaccgtatc ggacgagtgc ggaccttgca gatcgcgatc gtctggttcg
     3421 ccttcttcac attcctgtgc ggcttcgccc aagactacgt ccaattgctg gtgttgcgcg
     3481 cgctgatggg gctcggctac ggcggggaat gggcggcagg cgctgtgctg attggtgagg
     3541 tcatacgcgc gcagcatcgt ggcaaggctg ttggcagcgt acaaagcggt tgggctatcg
     3601 gctggggggt tgccgccctg atgtcgatgg tgtttttcac gctgttgccg caggatatgg
     3661 catggcgagc gttgttctgg atcgggttgc ttcctgcatt tttcgtgttc ttcgtgcggc
     3721 gcttcgtcac cgatccgccg gtgttcaaag tcgcacagga gcgtattgcc aacggacatc
     3781 ccagagcaag tgttctggac atcttctctc cggcgatgat caagacgaca attctgacct
     3841 ctctccttac cacaggggcg caaggaggat attttgcatt gttcacctgg ttgccgacct
     3901 atctgaaagt cgagcgcaac ctctcggtta tcggcacggg cggctatatc gccattgtca
     3961 tcctcggctc gtttgtcggc tatttggtga gcgcctacct tgctgatcgc atcggacggc
     4021 gccccaactt cattctctat gccgtgtcct ccgtcgtcac cgtgatcgtc tatttgcttt
     4081 tgcctatcaa tgacacaatg atgctgatgc tgggattccc actggggttc ttcgcttcag
     4141 gcattttctc cggtatggga ccttttttga ccgagaactt cccaacgcgc gttcggggct
     4201 cggggcaagg ttttacttac agctttggcc gcggcggtgc ggccctcaac ccgacatttg
     4261 tcggcatgct gagcgccacg ctgccgctgg gccagtcgat cgccatattt gcgcttggcg
     4321 cctatggact ggtcgtcatc gccgctctcc ttctgcccga gaccagaggt cgagagttga
     4381 cgccagatgc ctgaccatca agcgctgcgt ggagtagccc ttctctatga cgcgacccct
     4441 cggcgcacgt cggctggccg gataggcaga tggcgctacc gaaccccggt caccgcgaaa
     4501 atggcgttgt gatggcgggg gcgaccaccg tcgtaccggg ttcaccaagc ccgaccggga
     4561 tcctcggtgc tgtcgacgaa ctcgacgtcg agctcaggta catcgccgat gcgcaacggc
     4621 gtgtagctgt cgaagttcat gtctttcacc tggccgccag taaagctccg caaatcgcgc
     4681 caaccggttg ctaatgagac gccacatcgg cgtgcatcgg gagctcaaga gacggcggac
     4741 aaattcaccc gagatagccg caaacgccgt cccacaataa tttcaacgcc gtcacgacca
     4801 gcaatccgta gcaggcccga taaagctgac tttggtcgag ctttccgtga agccgccaac
     4861 caagccatac gccggttgga acggcgagca gacagaccgc caacaatatc catactgtgc
     4921 cgaccggttt caccagcagc agccagggca ccgccttggt tgcattgccg acagtgaaaa
     4981 acaggcttgt cgttcccgca tagacttcct tgctccggcc gagcggcagc agatatatcg
     5041 caagcggcgg cccgccggaa tgcgccaggg ctcgcacatt ttatattagg tcgttgtgac
     5101 cgccaccctc catcgttatt gcgacaagct aatccggagc gacgagcaat gtggggcacg
     5161 gagccgcgat cgcgcggcag gtgtagctgc cttatctgat tttagccgtt cggtgtccgc
     5221 ggcggctcgg gaatgaggcg cgagctgcgc tggccggtga aatacgacca cagccactag
     5281 cgctgcacgc gcagacggtt ctgcagctgc ggcaggaaga ggatgtgaac gaacgcccac
     5341 acgagccatg tcaggaagcc acttgtgcgc agccaacccc gctccagcac cgcgtaattc
     5401 ttgccgacga cgaccatgtt gcccttgtcg aaatagtgga acggacgttt gaccttcttt
     5461 ccctttagct cttttgcgat cagccgcccg acataccgcc cttcctgaaa cgccgcctgc
     5521 gccacgccgg gcacgggatg tcccttttgc atgaccgccg ccgcgtcgcc gacgacgaac
     5581 actccgtgcg tgtccatgac cttcaggaac ggatcgacga gcgctcgccc ctccccatcg
     5641 gttttggtac cgagcatctt tggaatggac
//
LOCUS       DATILV010000991         4598 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_247588, whole genome shotgun sequence.
ACCESSION   DATILV010000991 DATILV010000000
VERSION     DATILV010000991.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4598)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4598)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4598
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_247588"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..701)
                     /locus_tag="VLJ17_23965"
     CDS             complement(<1..701)
                     /locus_tag="VLJ17_23965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26068.1"
                     /translation="MQPLPDIIAKYHFNPQVTSAVMPDYYSLLVQKIREAETDSGKLR
                     ELVYEAARLALKRHVNVHYPALSLQDGKRLLADLEAAIERLEADEGGAVDRPAVHGES
                     EPVFSFTPNQNDRSPEAIPPETEHREDARPAIGPRPLQDGAGLLDWPLAESRNEPDSH
                     DLILVPNQSAPVNRGTAYSIHPNSYSSTRNDSWWEQARPRSVSRRTILIGVGIASHIA
                     VVILAGTAFYITVTGR"
     gene            complement(726..2942)
                     /locus_tag="VLJ17_23970"
     CDS             complement(726..2942)
                     /locus_tag="VLJ17_23970"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV26069.1"
                     /translation="MDAQGDSAAKVSRSRALVLRETKMMAAVQVRSIEFRPFVESAVA
                     NLIDNTPDKRGEIYARARGVVKRRLQLLRLPAPIAELERLALDLTIRKIERRWRAREA
                     AKRAVPQKRPERPLQRNAAARVRSIEFRPFVERAVANLIDNTPDKRREVYARARGVVK
                     RRLQLLRLPAPIAEFERLALDLTIQKIERRWRAREAAKRAVPQKRPEPPPLRNAAAHA
                     FTLFAEALKAFGTFLRLVVIAVLGHRPKIAAIGFFTRSRLWPKTPPMATTIGKVERRW
                     LALEPPKRAAPRIPLKRRTKRNTATQTFGFEAHKAVRTVLRFVLALRSYVTATVIPAG
                     LLRPLAKSIAVAALPTVAAIILFGHLDNTVTYRSVVDGPVGRWLSGRNGEPSAIARDA
                     PAAATMSAGCSGSSISERAACARYARGSSAEAESPWHVSFVALGDATSGRASMPLVSP
                     PVSTENVAARAAAPIAPPSEPAQILLIEPANPKVTVLIESGKRASLAGDLDHALRDFN
                     EAIRIDPKYPDSYSERGQTLFKLGQIERAMADYAAALMRDPQHVGALRARAMAYLQGG
                     KTDLALAELSKAIELAERDPRPAVPIELFHARRTRAAVYDSRQQYDLEIADCTALIDS
                     YAANPMLVAALTASYGSVGAADIRTTIYRQRANAFIKKSSSERPVADLTQAIPLGSNQ
                     GYAPLIDRSKVNERLDQDDEADAPAALSVRPGSEEARRPALERLGAPPKPTSPNGL"
     gene            3143..4243
                     /gene="mtnA"
                     /locus_tag="VLJ17_23975"
     CDS             3143..4243
                     /gene="mtnA"
                     /locus_tag="VLJ17_23975"
                     /EC_number="5.3.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011160352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046523 -
                     S-methyl-5-thioribose-1-phosphate isomerase activity
                     [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5-thioribose-1-phosphate isomerase"
                     /protein_id="HSV26070.1"
                     /translation="MLIDGKWKCGVWVEPDGWSVGIIDQTKLPHAVNTLRLTTLADAA
                     HAIASMQTRGAPVIGAVAAYGLCLALRADASEAALERAYATLLATRPTAVNLKWSLDE
                     VVAAVHSQPRGERIAAAYARAAAICREDIANNEAIGHHGLAVIERIADAKAPGARLNV
                     LTHCNAGWLATVDWGTAMAPIYKAHFKGLPVHVWVDETRPRNQGASLTAWELGHQSVP
                     HAVIADNTGGHLMQHGLVDLVITGADRVTAQGDVCNKIGTYLKALAAHDNGVPFYAAL
                     PSSTIDFALSDGLAEIPIEQRGREEIATMTGRTADGRIETVTVVPDSSAVANYAFDVT
                     PARLVTGLITERGVIAATREGIAARFPERVRR"
BASE COUNT          846 a         1395 c         1479 g          878 t
ORIGIN      
        1 cgccccgtca cagttatgta gaaggctgtg ccggccaaaa tgacgacggc aatgtgcgac
       61 gcgatcccga ccccaatgag aatcgtgcgg cgtgatacgg atcggggcct cgcctgctcc
      121 caccatgagt cattacgcgt cgacgaatat gagttcggat gaatcgaata ggcggtgccg
      181 cggttgacgg gggcggactg gtttgggacc agaatgagat cgtgcgaatc aggctcatta
      241 cgcgattcgg caagcggcca atccaatagc ccggcgccgt cttgtagggg ccgtggcccg
      301 atcgccgggc gggcatcctc acgatgttcc gtttctggag gaattgcctc cggcgaccga
      361 tcattttggt tcggcgtgaa ggaaaagaca ggctcgctct ctccgtgaac ggcagggcgg
      421 tcaactgcgc ctccctcatc cgcctcgagg cgctcgattg cggcttcgag gtcggcgagc
      481 aaacgcttgc cgtcctggag actaagcgcc gggtagtgga cgttcacgtg tcgcttgagt
      541 gccaggcgcg cagcctcata caccagttct cggagctttc cggaatcggt ttcggcttcc
      601 ctgattttct gcactaacag cgaataatag tccggcatga cggccgacgt cacctgcggg
      661 ttaaagtggt attttgctat gatatcgggt agaggttgca aatgccacaa tatccgacgt
      721 ggcgttcaca atccattggg cgaagttggc ttaggggggg cgccgaggcg ctcaagcgct
      781 ggccgccgcg cctcttcgct gccgggccga acgctgagcg cagccggcgc gtcggcttca
      841 tcgtcttgat caagccgctc attcaccttg gagcgatcga ttagcggcgc atatccttgg
      901 ttcgaaccca agggaattgc ttgtgtaagg tctgccaccg ggcgttcaga actcgatttc
      961 ttgatgaatg cgttagcccg ctggcggtag attgtggtcc ggatgtcggc ggccccgaca
     1021 ctgccataac tcgccgtgag ggctgccacc agcatcggat tggccgcgta agaatcgatg
     1081 agtgcggtac agtccgcgat ctccaagtca tattgctgtc tggaatcgta aaccgcggcg
     1141 cgggtgcggc gtgcatggaa caattcgatc gggaccgccg gccttggatc ccgttcagca
     1201 agctcgatcg ccttcgagag ttctgccaat gccaagtcgg tcttgccgcc ctggagatac
     1261 gccattgcgc gcgcccgaag cgccccaacg tgttgcgggt cgcgcatcag cgcggcagca
     1321 taatccgcca tcgcgcgttc aatttggccc agcttgaata acgtctgacc gcgctctgaa
     1381 taactgtcgg gatatttcgg gtcgatgcgg atcgcctcat tgaaatcgcg tagggcatga
     1441 tcaagatcgc ccgcgagact agcgcgtttg ccgctctcga tgagcaccgt taccttgggg
     1501 ttggccggct ctatgagaag aatttgggcg ggctccgagg gaggggcaat cggtgcagcc
     1561 gcacgcgccg cgacattctc agtggacacc ggcggggata cgagcggcat cgaggcccga
     1621 ccggatgtgg cgtcaccgag ggcgacaaag ctaacatgcc acggagattc cgcctccgcg
     1681 ctgctgcccc gagcatatcg cgcgcaggcc gcgcgctccg aaatcgacga tccgctgcac
     1741 cccgcggaca tcgttgctgc cgcgggtgca tcgcgtgcga ttgcactcgg ctcaccattg
     1801 cgccccgaaa gccaccgtcc cacggggccg tcgacaacgc tccgataggt gaccgtgttg
     1861 tcgagatggc cgaacaaaat tattgccgcg accgtcggca gcgctgcgac ggcaatcgat
     1921 ttcgccagcg ggcgaagtaa tcccgcaggg atgacggtgg ctgtgacata cgaccgaagc
     1981 gcaaggacga atcgcaaaac cgttctgaca gccttgtgcg cctcaaaacc gaaagtctgc
     2041 gtggccgtat tgcgcttggt ccgacgttta agcggaatcc gcggggctgc ccgtttgggg
     2101 ggctcgaggg ccagccaccg tcgttcgacc tttccgattg ttgtcgccat cggcggcgtt
     2161 ttaggccaca gacgcgatct cgtaaagaac ccgatcgcgg cgatcttcgg ccgatgccca
     2221 aggacggcga tcaccacgag ccgcaaaaac gttccaaaag ccttcagcgc ctcggcgaac
     2281 aaagtgaaag cgtgcgcggc cgcattgcgt aggggcggag gctcgggccg tttctgcggg
     2341 accgcccgtt tggcagcctc tcgggcccgc caccgtcgtt cgatcttttg gatggtgagg
     2401 tcaagtgcaa gcctttcgaa ctccgcgatc ggtgccggca gcctcaagag ttgcaggcgg
     2461 cgtttgacga caccgcgggc gcgcgcatat acctcccggc gtttatcggg ggtattgtcg
     2521 atgaggttgg ctactgccct ttcgacaaag ggtcggaatt cgatcgagcg cacccgcgca
     2581 gcggcattgc gttggagcgg acgttcgggc cgtttctgcg ggaccgcccg tttggcagcc
     2641 tctcgggccc gccaccgtcg ttcgatcttt cggatggtga ggtcaagtgc aagcctttcg
     2701 agctccgcga tcggtgccgg cagcctcaag agttgcaggc ggcgtttgac gacaccgcgg
     2761 gcgcgcgcat atatctcccc gcgcttatcg ggggtattgt cgatgaggtt ggctactgcg
     2821 ctttcgacaa acggtcggaa ttcgatcgag cgcacctgca cagcggccat catcttcgtc
     2881 tcgcgcagga ctagagcgcg agaccggctg accttggccg ctgaatcgcc ttgagcgtcc
     2941 atgtggagcc gtaacccatc ccaaaagcgt gaactgccta gctgaatcgc taccgcaaat
     3001 cacgcgccct gacggtttct agccactgtg cccccggtgt catgatcggt tcatcggttt
     3061 caaacacggt cgtttcaaga caggaacttg gtaagatgat gccctgccgt tggaacgttg
     3121 ggctggatgc ccgcaagccg cgatgttgat cgacggaaag tggaagtgcg gcgtgtgggt
     3181 cgagcccgat ggctggtccg tcggtatcat cgatcagacg aaattgccgc atgccgtgaa
     3241 taccttacgg cttacgaccc tggcggacgc ggcccacgca atcgcctcga tgcaaacccg
     3301 cggtgcgccg gtgatcgggg cggttgcggc ctatgggcta tgcctcgcac tgcgcgccga
     3361 tgcgtccgaa gccgcgctgg agcgcgccta tgcgacgcta cttgccacgc ggcctacggc
     3421 ggtcaacttg aaatggagtc tcgacgaggt tgtggcggcg gtacatagcc aaccacgggg
     3481 cgagcgtatt gcggccgcct atgcacgcgc cgccgccatc tgccgggagg acattgccaa
     3541 caacgaagcc atcggacacc acggtttggc cgttatcgaa cgcatcgccg acgccaaagc
     3601 gcccggcgcg cggctcaacg tccttaccca ttgcaatgcg ggctggctcg cgaccgtcga
     3661 ctggggcacc gcgatggcgc cgatctacaa ggcccacttc aagggcctgc cggtgcatgt
     3721 ctgggtcgat gaaacccgac cgcgcaatca gggcgcctcg ctcaccgcct gggagcttgg
     3781 ccaccagagc gtgccgcacg cggtgatcgc cgacaacacc ggcggccacc tgatgcagca
     3841 cggattggtc gacctcgtga tcaccggcgc cgaccgtgtc actgcccaag gcgacgtctg
     3901 caacaagatc ggcacctacc tcaaggcact ggcagcgcac gataacggtg tgccgttcta
     3961 cgcggcgctg ccgtcgtcga ccatcgactt tgcgctcagc gacgggcttg ccgagatacc
     4021 gatcgaacag cgtggacgcg aagagatagc caccatgacc ggccgcacgg ccgatggccg
     4081 aatcgagacc gtgacggtgg tgccggacag ctcggcggtc gcgaactatg ctttcgacgt
     4141 gacgccggcg cggctcgtca ctggcctcat caccgagcgc ggcgtgatcg cagcgacacg
     4201 cgaggggatc gctgcgagat ttccggagcg ggtgcgcagg tgaggccgat caacgaatgg
     4261 cagctcggca aaatgtcggc agttggccca taggagtcga atcgtaaacg atgccgagcg
     4321 ggtccggtag ttggggtact gcggcccctc tctgccggat cgaacaccga cggcaggtct
     4381 caggttgagc ctcggccggc cacaaggcga cgacgcggct ggcgaaaggt ttccggcgga
     4441 tcggcgttga ggatttgaac gtgtgcggca tggcgaagaa gcgctgcctt gcccgctcga
     4501 ttatggacgg cggtttcttc gaatttcggc ggcagcttgc ctacaaggcc cgcctttatg
     4561 gcgcggcggt ggtcgtggcg gatcggtggt ttccctca
//
LOCUS       DATILV010000992         6533 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_1529520, whole genome shotgun sequence.
ACCESSION   DATILV010000992 DATILV010000000
VERSION     DATILV010000992.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6533
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1529520"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1558
                     /locus_tag="VLJ17_23980"
     CDS             <1..1558
                     /locus_tag="VLJ17_23980"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HSV26071.1"
                     /translation="PWWSTVFHVGYMRTFTPPLQVLGRTVPNGLFDNTTAAVLPNVGS
                     IEPERAHVVDAGVVQQLLPQCPTAPVGPTKAPVAAPNCPSLELGLNAYYKVSRNLLDD
                     GQFGQALVLTAFNYDRAENYGVEATLRFRYGNFAFDTNWAYGLQHATKVVSNQSLFGQ
                     DELDFIASHWVHTDHDQTWTGSGRVAYRWTDTHSWLDGTTASATFIYGSGLRTDGEFE
                     GGPCPNCAKLPSYYQVNLGLSHEFANGWNGLPYTVRFDVVNVTDNIYQIRNGSGIGVF
                     ASQFGPRRGYYMGITQKLGAPEKAPEGSPGFYTKAAGATAYHWNGPYVGANFGGAFSA
                     GEGVATALGGNTTNPSGALGGLQLGYNYKFAPAWLVGIEGEFDWTSAQGKTNFVDPAG
                     TASLSITSDHNWYSTVSGRLGHVMGPLMLYGKAGAAWMNADYRMEVNSGIDGFTLTNT
                     TKTGWNVGAGLEYMLGSRWSAKLEYNFLDFGSNTLGFVNPFGNSVTFKTAVNEVKAGV
                     NYHFDGILPF"
     gene            2085..2894
                     /gene="exbB"
                     /locus_tag="VLJ17_23985"
     CDS             2085..2894
                     /gene="exbB"
                     /locus_tag="VLJ17_23985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009799106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_function: GO:0015291 - secondary active transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tonB-system energizer ExbB"
                     /protein_id="HSV26072.1"
                     /translation="MPPAAGAPFPAERVTELPSAADQAASGILPRDLTPYGMFMSADI
                     VVKAVMLGLIFASVLTWTIWLAKTLELFGVRRHLARAQHSLRTAHSLVEVAPTAEGAS
                     RHVALLIRAVEAELARSSDRHDIEGIKERITARFERIEAGVGRKMMRATGILATIGAT
                     APFVGLFGTVWGIMNSFIGISKLHTTNLAVVAPGIAEALLATAFGLAAAIPAVVIYNM
                     FARSIANYRALYADACVEILTLVSRDLSQPPAARLDIFDPRRRPAAVPMAE"
     gene            2900..3325
                     /gene="exbD"
                     /locus_tag="VLJ17_23990"
     CDS             2900..3325
                     /gene="exbD"
                     /locus_tag="VLJ17_23990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015291 - secondary active transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein ExbD"
                     /protein_id="HSV26073.1"
                     /translation="MSIRLDNSEGSLGVIHEINVTPFIDVILVLLIIFMIAAPLATVD
                     VAVDLPTSNVERQPRPDQPIFLTIKSDLTLWLGDAPVSSAGLQSALDGISKGDRSQRV
                     FLRADRSVSYGNLMEKMNVLRTAGYLKVALVGLEAETLR"
     gene            3322..3999
                     /locus_tag="VLJ17_23995"
     CDS             3322..3999
                     /locus_tag="VLJ17_23995"
                     /inference="COORDINATES: protein motif:HMM:NF024503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HSV26074.1"
                     /translation="MNAIAAMALDRRAEAARWIMCFAVAAAAHGLAATAFLNNPPEAS
                     DFGIDVPVAMLELPESLITSTAPASDLPPGPMQEDESLPTPPPKEETKPPEPEAEVAI
                     PIPEPPKPEPPSEEKHATAPQQARAMPSVVIRWQSELAAHIEHFKRYPAEARSRGDQG
                     TAKVAFTIDHGGRLLMSRIVQSSGSAALDNETLAMLARAQPMPRPPDQLSTAELTFVV
                     PIRFNIR"
     gene            4006..4413
                     /locus_tag="VLJ17_24000"
     CDS             4006..4413
                     /locus_tag="VLJ17_24000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26075.1"
                     /translation="MPHPMDWFRSNNSRIAWLAFFALACQFVLTFGHVHPGNARSVST
                     VLAIPADSATGSPGTQSLPAQKMPVGLAQDFCAVCNNISLADTLVLPVAPAANPSASI
                     VQLTRWPLIAIEYVSCDHFRFNARGPPQPEPAT"
     gene            4563..4760
                     /locus_tag="VLJ17_24005"
     CDS             4563..4760
                     /locus_tag="VLJ17_24005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26076.1"
                     /translation="MKRMILFVAGLGIVFLASAVQTFGTNWLGQTCPSPGPCFRPEWL
                     ATGIVLSAAAYIAWKIDRSRH"
     gene            complement(4952..>6533)
                     /locus_tag="VLJ17_24010"
     CDS             complement(4952..>6533)
                     /locus_tag="VLJ17_24010"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HSV26077.1"
                     /translation="VCNANYAAMYGLPREHTEPGTSLRRILEYRVATGAAPINAESFV
                     EEVLASGSAPAGVTEQELHDGRTISVISAPLSTGGGVTIHVDVTEKRNSERQIAFLAH
                     HDALTGLANRVQLRTHIDKSLKQAGQSFALLCLDLDRFKAINDTLGHPVGDALLRAVS
                     ERLRGIVRNSDLVSRTGGDEFSIVQFGAEPPAYAALAARVIEVLSAPFDLGDHQVVIG
                     ASVGIAISPDDGNDADQLLKNADMALYKAKDDGRGRFHFFEAEMDAQAQARRILELDL
                     RKAVATGEFELFFQPIVNLAENKISALETLLRWNHPTRGRVSPDEFIPLAEETGLIVS
                     VGEWVIRQACVVASTWPPDLRVAVNVSPLQFRNKHLVSAVISALAASGLRADRLELEI
                     TETALMCDNDGTMAVLRQLQNLGVRISMDDFGTGYSSLSYLRSFPFDKIKIDQSFVRD
                     LIEKPDSIAIIRAVARLGCSFGMTTTAEGVETQEQLDQMRAEGCTEVQGFFYSKPLPT
                     TEIAQLLSSFRERAQAAA"
BASE COUNT         1299 a         2026 c         1866 g         1342 t
ORIGIN      
        1 gccgtggtgg tcgacggtct tccatgtcgg ttacatgcgg acctttacgc ctcccctgca
       61 ggtgctcggc agaaccgtcc ccaacggcct gtttgataac acaaccgccg ccgtcctgcc
      121 gaatgtcggt tcgatcgaac cggagcgggc gcatgtggtg gacgccggcg tggtgcagca
      181 attattgccg caatgtccga cagcgccagt cgggcccacc aaagcgcccg tcgcggcgcc
      241 gaattgtccg agcctcgagc tcggtctcaa cgcctactac aaagtctcga ggaacctgct
      301 tgacgacggg cagttcggcc aagcgcttgt gctcactgcc ttcaactacg acagggccga
      361 gaattacggc gtcgaagcta cactcaggtt caggtacgga aacttcgctt ttgacaccaa
      421 ttgggcgtat gggctccagc acgcgaccaa ggtcgtatca aatcaatccc tgttcggtca
      481 ggacgaattg gatttcattg cgagccattg ggtccacacc gaccacgatc aaacctggac
      541 gggttccgga cgagtcgcct accggtggac cgacactcat agttggctag atggtacgac
      601 tgcgagcgca accttcatct acggcagcgg cttgcgtaca gacggcgagt ttgagggggg
      661 gccctgcccc aactgcgcca agctgccgtc ctattatcag gtgaatctcg gcctgtcgca
      721 tgagtttgcc aacggctgga acggactgcc ttatacggtc cggttcgacg tcgtcaacgt
      781 gactgacaac atctaccaga tccgcaatgg cagcggcatc ggcgtgtttg cgtcgcaatt
      841 cggtccgcgg cgcggatact acatgggcat cacgcagaag ctcggagctc cggagaaggc
      901 tccagagggc tcgcccggct tctacaccaa ggccgcaggc gcgaccgcat accattggaa
      961 cggcccctat gtcggtgcca acttcggcgg cgcgttcagc gcgggagagg gcgtggccac
     1021 tgcgctcggc ggcaatacaa ccaatccaag cggcgcgctt gggggcttgc agctcggcta
     1081 caactataaa ttcgcaccgg cgtggctagt cggaatcgaa ggcgaattcg attggacgtc
     1141 ggctcagggc aaaactaatt tcgtcgatcc ggcggggacg gcgtccctct ccattaccag
     1201 cgatcacaat tggtatagca ccgtgagcgg caggcttggc catgtgatgg gaccgctgat
     1261 gctctacgga aaggccggcg ccgcctggat gaatgccgat taccgcatgg aggtgaacag
     1321 cgggatcgac ggtttcactt taaccaacac gactaagacc ggatggaacg tcggcgctgg
     1381 cctggaatac atgctgggct ctcgctggtc ggcgaagctc gagtataact ttctcgactt
     1441 tggcagcaac acgttgggct tcgtgaatcc tttcggtaac agcgtcacct tcaaaaccgc
     1501 agtcaacgag gtcaaagccg gcgtgaacta ccacttcgat ggaatactgc cgttttgacg
     1561 ggatcttgag gtgttcagtg atgcaatgat cggagtgtca tgaagtaagc agctcaattt
     1621 gcagcgatca acatcccgct gcaataaaat gccgatgaac gtccggcgcg gttttccttt
     1681 atctcgtagg acagccgcga gcgggttttg gcgttgcaaa atggcaaggt ctccaatgca
     1741 ttggggctgg attggaaaca tttgcgaata cccggtgtaa aggtgataaa atgttatcga
     1801 aaccaatcga gaccatcaaa cgggaaaggg ccacgcacga ccggattccc gatatgctcc
     1861 gcgctgctat tttggccctg atcgtcgttt ccggctccat ctcagtctac gcgcagcagc
     1921 cgcgaagcgc gtctccgacg caggtaggtc cgcctaccca gacactttcg cccgcagtac
     1981 ccgcaccgcc tccacttcct ccaccggttg aagcagcccc tcaacccctg ccgccgcccg
     2041 ccgcagccgc gcctccgccg agtgctcctg agcgatccga aacgttgcct ccggcggccg
     2101 gcgccccatt tcctgcggag cgggtcaccg agcttccatc agccgcagat caggccgctt
     2161 caggcatcct gccacgagat ctcacgccat atggcatgtt catgtcggcg gacatcgtgg
     2221 tgaaagccgt gatgctcggt ctcatcttcg cctcggtgct gacctggacc atttggcttg
     2281 ccaagactct ggagcttttc ggtgtcaggc gacacctcgc acgcgcgcaa cattcgctac
     2341 gcacagccca ttcactcgtc gaggtggccc cgacagcgga aggagcaagt cgccatgtcg
     2401 ccctcctgat ccgtgccgtg gaggccgagc tcgcccgatc ctccgatcgc cacgatatcg
     2461 aaggcatcaa ggagcgcatc acagcgcggt tcgagcgcat cgaggccggg gttggccgca
     2521 agatgatgcg tgcgactgga attctcgcga ccattggcgc cacggcgcca ttcgtaggct
     2581 tgttcggcac cgtatggggt atcatgaaca gcttcatcgg tatttcgaag ctgcatacga
     2641 cgaaccttgc agtggtggcg ccgggcatcg ccgaggcgct gcttgccacc gcattcgggc
     2701 ttgcggcagc cattccggcg gtggtgattt acaacatgtt tgcccggtcg atcgctaact
     2761 accgcgcgct ctacgccgac gcctgcgtcg agattctcac actggtcagc cgcgacctca
     2821 gtcaaccgcc cgccgcccgg ctcgacatat tcgatccgcg gcggcgaccg gccgcggtgc
     2881 cgatggcaga gtagctgcaa tgagcatccg tctcgacaac agcgaaggtt ctctcggcgt
     2941 cattcacgag atcaacgtga cgccgtttat cgacgttatt ctggttctgc tcatcatttt
     3001 tatgatcgcc gcgccccttg cgacggtcga tgtcgcggtc gatctcccca cctccaatgt
     3061 ggagaggcag ccgcgcccgg atcagccgat ctttctcact atcaagtccg atctgacgct
     3121 gtggttgggt gatgcccctg tgtcgagcgc ggggctgcag tccgctttgg acggcatctc
     3181 aaaaggagac cgctcccagc gcgtgttcct gcgcgccgac aggtccgtgt cttacgggaa
     3241 cctgatggag aagatgaatg tgctgcgcac ggccggctat ctgaaagttg ccctggtcgg
     3301 acttgaggcg gagaccttgc gatgaacgca attgccgcga tggctttgga ccggcgcgcg
     3361 gaggcagcgc ggtggattat gtgttttgcg gtcgcggcgg cagcccacgg ccttgccgca
     3421 acggcgttcc tgaacaatcc acccgaggct tccgacttcg gcatcgacgt tccggtggcg
     3481 atgctcgaac ttcccgagtc gcttatcacg tcgacggcgc cagcttcgga tttgccgccg
     3541 ggccccatgc aggaggacga gagcctaccg acgccgccgc caaaggaaga gaccaaaccg
     3601 ccggaacccg aagcggaggt ggcgatacca attccggagc cgccaaagcc ggaaccgcca
     3661 tccgaagaaa agcacgcaac cgcgccgcag caggcgagag cgatgccaag tgtggtcatc
     3721 cgctggcaga gtgagctcgc ggcccatatc gagcatttca aacgctaccc cgccgaggcc
     3781 cgctcacgcg gagatcaggg caccgccaag gtcgcgttta ctatcgacca tggggggcgc
     3841 ttgctgatga gccgcatcgt ccagagctca ggctcggccg cgctcgacaa cgaaacgctc
     3901 gccatgctgg cgcgcgcgca gccgatgccg cggccgccag atcagctttc cactgctgaa
     3961 ttgacctttg ttgttccgat acgtttcaac atccgatgac gcgagatgcc gcacccgatg
     4021 gattggttca gatcgaacaa cagtagaatc gcctggctgg cgttttttgc gctggcttgc
     4081 caattcgtgc tcacgttcgg tcacgttcat ccgggcaatg ccagatccgt gtctaccgtt
     4141 ttggcgattc cagccgattc ggccactggt tcgcccggca ctcaatctct gccggcacaa
     4201 aagatgccag tcggtcttgc tcaagacttc tgcgcagttt gtaacaatat cagtttggca
     4261 gatacgctgg tcttgcctgt cgcacccgcc gctaatccgt ccgcttcaat cgttcagctt
     4321 acacggtggc cgctgatcgc gattgagtat gtctcatgcg atcattttcg tttcaacgcc
     4381 cgcggtcctc cccagcctga gccggcgacc tgaacggctg catcgccgac gccatcgcct
     4441 ccctgcgccg ttctcgtcac cggtacacct tggcacctgc ccgcgcccgt gccgccgcgt
     4501 tcgcgtgggc gcgaactgat cgttgcgatg aagcagttgg accaattcag gcgccgtctc
     4561 cgatgaaaag aatgatccta ttcgtcgcag gtctcggcat cgtgttcctc gcaagcgccg
     4621 tccagacctt tggtacaaat tggctcggcc aaacatgtcc ctctcccggg ccgtgctttc
     4681 gccccgaatg gctcgctacc ggcattgtgc tgtcggccgc cgcctacatc gcttggaaga
     4741 tagatcgaag ccgtcactaa cggctgcgga cgaaccaggt aagcgccgtg cggaggtcgt
     4801 ccggccgcta cttcacggaa aacacccgca ccgcccggcg gcgcgaaatc agtgcatcgg
     4861 cacaagctcc ggcagcaccg cgtcgaccct tgcgaccaca acggtgtcgg caatgtttgg
     4921 agctatcgcc cgaactgctt tcagccacga gctacgccgc ggcttgggct cgttcgcgga
     4981 agctggatag cagttgggca atctcagtgg tgggtaaggg cttgctatag aagaagccct
     5041 gcacctcggt gcaaccctcc gcgcgcattt gatccaactg ctcctgagtt tcgacgcctt
     5101 cggccgtcgt cgtcataccg aagctgcagc caagccttgc gacagcacga atgatggcga
     5161 tggagtcagg cttttcaatg aggtcgcgaa caaagctttg gtcgatcttg attttgtcga
     5221 acgggaagct gcggagataa ctcaacgaag aatatccggt tccgaagtca tccatcgata
     5281 tccggactcc taggttttgc agctggcgca gcactgccat tgttccatcg ttgtcgcaca
     5341 ttaacgcggt ttcggtgatt tcaagctcta gccgatctgc gcgtaaacca gacgccgcca
     5401 gggccgatat tacggcggaa accagatgct tgttccggaa ttgcagcggc gaaacattaa
     5461 ccgctacccg cagatcgggt ggccaggtgc tagccacgac acacgcttgc cggatcaccc
     5521 actcgccgac cgagacaata agcccagttt cctcggccaa tgggatgaat tcgtccggcg
     5581 aaaccctccc gcgcgttgga tggttccacc gcagcaatgt ctccaatgcg ctaatcttgt
     5641 tctctgcgag attgacgatg ggctgaaaaa agagttcgaa ctccccggtt gcgacggctt
     5701 ttcgtaaatc aagctcgagg atacgtcgcg cctgcgcctg ggcgtccatt tcggcttcga
     5761 agaaatgaaa acgcccacgg ccatcgtcct ttgccttgta caacgccatg tcggcattct
     5821 tcaagagctg atccgcatcg ttgccgtcat caggcgaaat ggcaatccca acgctcgcgc
     5881 caatcacgac ttgatgatca ccaaggtcga acggcgcgct caagacttcg ataacgcgcg
     5941 ctgctagagc cgcataggcc ggcggctcgg cgccgaactg cacaattgag aactcgtcgc
     6001 cgccggtccg cgagactagg tcgctattgc gcacgattcc gcgtagacgt tccgagacgg
     6061 cgcgtagcaa tgcatctcca acgggatggc cgagcgtgtc attgatcgct ttaaagcggt
     6121 cgaggtccaa acaaagcaga gcgaagctct ggccggcttg cttcaggctc ttgtcgatat
     6181 gtgtgcgcaa ttgaacgcga tttgccaatc ccgtcaatgc atcgtgatgg gccaagaagg
     6241 caatctgcct ctcagaattt cgcttctcgg tcacatccac atgaatcgta accccgcctc
     6301 ctgtgctcag tggcgcgctg ataaccgaaa tggtgcgccc atcgtgcaat tcttgctccg
     6361 taactcctgc tggcgcagat cctgatgcca gcacctcttc aacaaagctt tcagcattga
     6421 tcggagctgc tcccgttgca actcggtact ctagaatcct tcgaagcgag gtgcccggct
     6481 cggtgtgttc cctaggaagt ccatacatcg ccgcatagtt tgcgttacag acg
//
LOCUS       DATILV010000993        14428 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_248030, whole genome shotgun sequence.
ACCESSION   DATILV010000993 DATILV010000000
VERSION     DATILV010000993.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 14428)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14428)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14428
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_248030"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..969
                     /locus_tag="VLJ17_24015"
     CDS             <1..969
                     /locus_tag="VLJ17_24015"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSV26078.1"
                     /translation="NNADVIIGLELSDYWALVNAFIDNGHDGLGVNETRIKPGTKLIG
                     ITSTGLVTKSNYQDFQRFQSLDVDMAGDAEATLPALIEAVKAAIPNDRKAALEKRGDD
                     LKKAWEGARERTKAAAAVAWDASPISTARLSMEIFAQVKDLDFSLVSSSGNVSGWPNR
                     LWRMEKHHNWLGSSGGAGVGYGAPASVGAALGNRDVGGRFSVNIQSDGDLMYAPGVLW
                     TAARHKIPILSVMHNNRGYHQEVMHVQRLANRRNRVAALGMDRSPIGTSIENPDIDYA
                     SLAKSMGYWSAGPIKDPAELGPTLKRAVEVVKSGQPALVDVWTQPR"
     gene            977..1324
                     /locus_tag="VLJ17_24020"
     CDS             977..1324
                     /locus_tag="VLJ17_24020"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSV26079.1"
                     /translation="MKSRNVIGLAALAAGLVICQGSALGASAEKGKLAFLQHGCWQCH
                     GYQGQGGIAGLKLAPNPIPFETLSNFVRSTNRAMPPYREDILSNDDLADIYAYLQSIP
                     KDPDPKSIPLLNP"
     gene            1601..2146
                     /locus_tag="VLJ17_24025"
     CDS             1601..2146
                     /locus_tag="VLJ17_24025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HSV26080.1"
                     /translation="MNLPNLITIGRILLVPVVVWAIASRQMQIAFLVFLIAGLSDAID
                     GFLAKRLGMTSELGAHLDPLADKVLIVSIYVALGITEAIPRWIVILVVSRDILIVGGV
                     MLAWFLGKPIRVRPVLVSKLNTVAQIVFACLVLASLAFNVAFNLAEYIVMSMVAALTL
                     ASVGFYVREWVLHMSASELKS"
     gene            2269..3330
                     /locus_tag="VLJ17_24030"
     CDS             2269..3330
                     /locus_tag="VLJ17_24030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HSV26081.1"
                     /translation="MTFTRPMAFWSAALASFVVLIWLLHEILLPFVAGMVLGYLLDPL
                     ANRIERLGVGRLAAAMLIIGLSGFAIIFLLILMAPILIGQLAAFVEQLPDYVSRLHAL
                     VTDPNRPWLTRILGASLGEQDLSDATKQASTGALLFLHSLMAGGHALVSAFWLLVITP
                     VVAFYMVYDWQRIIATVDGWLPRTYADTIRTLAKEIDSAIAGFIRGQTGICLIIASLY
                     AVGLTMLGLNYGLLIGAVAGFLSFIPYVGSLTGLLLAVGVALAQFWPDAISILSVIGV
                     CIVCQFLEDYVLAPTLVGSIIGLHPLWLMFSLFAFAYLFGFVGLLLAVPLASAFAVLI
                     RFALKQYLASSLYSGKELR"
     gene            3327..4028
                     /locus_tag="VLJ17_24035"
     CDS             3327..4028
                     /locus_tag="VLJ17_24035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator DnaA"
                     /protein_id="HSV26082.1"
                     /translation="MSRSDPATPRQLNLALGHRESFDRVDFLCGRGNETALALIDRWT
                     DWPTRTIALTGPEGSGKSHLAAIWAKSAGGQVIASHIIDAPSVPQALSRGALAIEDAD
                     RGELDEAALFHLLNLAQEQSAYVLITARQAPASWPIKLADLASRLRAVPLVTLDPPDD
                     ALLAAVLVKLFADRQLTVDERLIEFLIHRIERSFAAAQAVVAELDYEAMRLKRPVNRA
                     LAAEILRGRGPGHPG"
     gene            4110..6326
                     /locus_tag="VLJ17_24040"
     CDS             4110..6326
                     /locus_tag="VLJ17_24040"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018456274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009358 - polyphosphate kinase complex
                     [Evidence IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006799 - polyphosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA degradosome polyphosphate kinase"
                     /protein_id="HSV26083.1"
                     /translation="MVDAAQAIVLPFESAPELNHNDAVSEPLTPADGASRYINRELSW
                     LHFNRRVLEEAANPNHPLLERVRFLSISANNLDEFFMVRVGGLKGQVRAGIVTRSPDG
                     LTPAEQLARISEAVSTLVIDQQNRWSELRGELAAKDIFLVEIDSLKKADRNWLADHFL
                     RNIFPLLTPLAIDPAHPFPFIPNLGFSLALQLDRASDGKPMNALIRVPPKIERFIRLP
                     SSAENGAVRLITLQQVTSLFIARLFPGYIVKGYGAFRIIRDSDIEIAEEAEDLVRQYE
                     TVLKRRRRGTVIRLEMEPAMPEELRRFVQRALSATDDEVILVDGTLALAELSQLTNLD
                     RPDLEFVPYNPRFPERIREQAGDCFAAIRQKDLIVHHPYESFDVVVQFLQQAARDPDV
                     VAIKQTLYRTSNDSPIVRTLAEAAEAGKSVTALVELKARFDEEANIRWARDLERAGAQ
                     VVYGFIELKTHAKLSMVVRRERGSLTSYVHVGTGNYHPVTARIYTDLSFFTAEPATAR
                     DVARIFNYITGYAEPADLERMSVSPLNLRKRILDHIASEATHARAGRPAAIWMKMNSL
                     VDPVMIDALYEASAAGVAVELVVRGICCLRPGVCGLSENIRVKSIVGRFLEHGRIYCF
                     GGGHGLPHPKAAVYISSADLMPRNLDRRVEALCPITNPTVHQQVLDQIMIANIKDNEQ
                     SWALLSDGTSVRMNAATGEEPFNAHKYFMTNPSLSGRGESLKKSSPRRLTQRRNLE"
     gene            6323..7885
                     /gene="ppx"
                     /locus_tag="VLJ17_24045"
     CDS             6323..7885
                     /gene="ppx"
                     /locus_tag="VLJ17_24045"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004309 - exopolyphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006798 - polyphosphate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HSV26084.1"
                     /translation="MNFSAAGVGRTAKRTSEIAAQGRIDNGPPIAVIDIGSNSVRVVV
                     YEGLTRSLTPIFNEKVLAGLGREVLTTGLLTTDAIDKALAALRRFRALCDAMRVGHVW
                     AIATAACRDARNGPAFIVEAEKACGASIEVLSGRREAELSALGIISGFHKPDGIVGDL
                     GGGSLELTDVRGRKLKSGMTLPLGGLALQDLSARSLAKAEKIVRDALGHAAFLKGGRD
                     RDFYAVGGTWRSLTRLHMWQIGYPLHVMHGYAIPASEAMEFSRLVRRVDPETLSKIET
                     VTAARRPLLAYAALVMEHVVRIARPRRIVVSTLGVREGLLFTALGDTEKKRDPLIAAA
                     QELNVLRSRSPRHGEELADWSDKFMTTTGLGETGDEKRLRRAACLLADIGWRAHPDYR
                     GEQSLNIISNAAFVGVDHPGRAFIALTVYFRHVGLAGLADDELSPHVRELATSRMIDR
                     ARVLGAAMRVAYLVSGAMPGVLPNTPLVVERGNLKLKLCGKYSSLAGERLFARLKQLA
                     RLIGREATMVTG"
     gene            complement(7923..9812)
                     /locus_tag="VLJ17_24050"
     CDS             complement(7923..9812)
                     /locus_tag="VLJ17_24050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HSV26085.1"
                     /translation="MLVIDDISLRVAGRLLIERATAQIPDGARVGLVGRNGTGKSTLF
                     RAIAGDIAVEHGSFARPARASLGQLPQEAPSGPERLIDLVLAGDRERTFLIQEAETAT
                     DPHRIAEIQSRLADIGAHAAPARAAGILAGLGFSHADQQRACAEFSGGWRMRVALAAV
                     LFAEPDLLLLDEPTNYLDLEGTLWLEDHIARYPRTVIVISHDRDLLDSAVDSILHLER
                     AKLTFYRGNYTSFERQRNERLALDESLARKQEAQRRHLTAFVERFRAKASKARQAQSR
                     LKLLAKMQPIDVLVEHEARAITIPSPEKPLSPPIIALDDMTVGYEPGRPVLRRLTLRI
                     DADDRIALLGANGNGKSTLTKLLTGRLAPFSGTMTRAERLKVAYFAQHQLDELNPQAS
                     AYDHVRRLMPDAPEARVRARVGGLGFPATMADTKVAHLSGGEKTRLLLGLATFEGPDL
                     VVLDEPTNHLDIDSRAALIEGINDYSGAVILVSHDRFLLETCVERLWLVANGEVNPFE
                     GDLDDYRRLVLGGSAGLPAERNSAAEGRTTRADLRRAAAEKRSELAPLKRRIDEFDKT
                     IAMLTKKIDQIDAILADAQLYGRDPSRVATLSKERAAAASALAAAEDRWLALSAQYES
                     AMADS"
     gene            10021..10833
                     /locus_tag="VLJ17_24055"
     CDS             10021..10833
                     /locus_tag="VLJ17_24055"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HSV26086.1"
                     /translation="MCVAGCEMTVRAALSRRVFFQGVAAAGFTATAVPANAQARGFSK
                     AVDLTHTMSPEFPTFMGKPGIEMQREFEFKKDRFNLFWWHVIEHAGTHLDAPIHFSES
                     GFSADQLPVEQLVVPLAVVNVIYQAEQDADYQLSREDLVKWEAQHGRLPAGCCVALHS
                     GWGELATADPARFVGRDVNGTLHFPGFAPEAAAWLMKERLVAGLAVDTMSLDHGPSRD
                     FKTHQLWLPSGRWGLENVANLDKVPEAGATLVVGASKVKDSTGGLARVIALV"
     gene            11198..11905
                     /locus_tag="VLJ17_24060"
     CDS             11198..11905
                     /locus_tag="VLJ17_24060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin"
                     /protein_id="HSV26087.1"
                     /translation="MNYLNDKRLLCELIGTATLILVGCGAVTIGGFGSAFPVGILPVA
                     LAFGLTVMAMAYAIGPVSGCHINPAVTAAMWAAGRTNGADAISYVVAQVIGGILGAAI
                     LVVILKGKIAGYDVMAAGLGQNGWGAGYLGGFGLTSAMLTELVATFLFTLVILGATSQ
                     KGATPVAGLIIGLTLVVLHFPFINVTGLSVNPARSLGPAVFVGANALAQVWLFLVFPT
                     LGGLAAGWLVKSKTLDI"
     gene            complement(11963..12325)
                     /locus_tag="VLJ17_24065"
     CDS             complement(11963..12325)
                     /locus_tag="VLJ17_24065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26088.1"
                     /translation="MAGTPGVPAAEPLISQGIGTSNCEQLAEDIKPAEGLSNPINLLL
                     VAWVQGYMSAANIALLEDDGHHVDMSAFDDTKVLTLMQAFCKVNPDKKPITAIDDLIR
                     KSAKVKAKWELGTIEWDE"
     gene            complement(12460..13206)
                     /locus_tag="VLJ17_24070"
     CDS             complement(12460..13206)
                     /locus_tag="VLJ17_24070"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HSV26089.1"
                     /translation="MNDASSGAAPRSGGPADPVAIDDLIAANRILADQGVLDGYGHVS
                     MRHGSAADRYFLSRSKSPAIITAEDIMEYDLDSNPVDQQGRLMYIERYIHGEIYKARP
                     DVNAVVHSHSPTVIPFSVTSVKLRPICHMSAFLKQDVPNFEIRDCDGMTDLLIRNAKH
                     GAGLASVLGSHDVALMRGHGNVCVGPNIMTAVYRAVYTEVNARLQAQAIALGGPINFL
                     EPEECELITSRRDTNFQRPWTMWKSRICTS"
     gene            13408..14424
                     /locus_tag="VLJ17_24075"
     CDS             13408..14424
                     /locus_tag="VLJ17_24075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26090.1"
                     /translation="MLEIDAATGTLTIPIWAAGAGSAVFLASIVLAIGRAGAGALINA
                     LFRIGIVVIVLSAGWFYMQRTEQQEQATERRLLSERLAALLTRAVAPGSALSCLDELA
                     GEAVEVACEKAVFASPEAVANAVTYITAKLAVLADGSEYARRAGTAFAAELVPLRAAL
                     ELDRFGIVAHVLAKRYGCTADKCDILSWFSDHSHVLANLRDHTFDEHVTKFAANWNGP
                     PRTAADATAAVAPTAAVPVSPRYDFPSSQSIPPINIMVPEAPASRVGAASGGQPASAP
                     ANDNSRSAITPVPPRRPPQGRTAPAVAGSRPPSPPQPAVPIAVGEAPTDGAVPHPSGP
                     AEPR"
BASE COUNT         2685 a         4307 c         4430 g         3006 t
ORIGIN      
        1 aacaatgccg acgtcatcat cggccttgag ctgtcggact actgggcgct ggtgaatgcg
       61 ttcattgata acggtcacga cggcctcggc gtcaacgaga cccgcatcaa gcccggtaca
      121 aagctgatcg gcattacttc cacgggcttg gtcaccaagt cgaactatca agacttccag
      181 cgcttccagt ccctcgatgt cgatatggct ggcgatgcgg aagcaacctt gccggcgctg
      241 atcgaggcgg tgaaggccgc gattccaaac gatcgcaagg cggcgctgga aaagcgcggt
      301 gatgatctca aaaaggcttg ggaaggcgcc cgtgaacgca ccaaggccgc tgccgcggtg
      361 gcatgggatg cgagcccgat ctcgaccgcc cgtttgtcga tggagatctt tgcgcaggtt
      421 aaggacctcg acttctcgct ggtgtcgagc tctggcaacg tcagcggctg gccgaaccga
      481 ctgtggcgta tggaaaaaca ccacaattgg ctgggcagct ccggcggagc cggtgtcggt
      541 tacggcgcgc cggcctcggt tggcgcggcg ctcggcaacc gcgatgtcgg cgggcgcttc
      601 tccgtcaata tccaatcgga cggcgacttg atgtacgcgc ccggcgtgtt gtggactgcg
      661 gcgcggcaca agatcccgat cctcagcgtc atgcataata accgtggcta ccatcaggaa
      721 gtcatgcacg tgcagcgcct tgccaatagg cgcaaccgcg tggccgcgct cggcatggat
      781 cgcagcccaa tcggaaccag catcgaaaat ccggacatcg attacgcttc gctggcgaaa
      841 tcgatgggct actggagcgc cggcccgatc aaggacccgg ccgaactcgg cccgaccctc
      901 aagcgtgccg ttgaagtggt aaagtccggc caacccgcgt tggtggacgt gtggacgcaa
      961 ccgcggtgag gaagctatga aatcgcgtaa cgtcatcggg ctggcggcgc ttgccgccgg
     1021 cctcgtgatc tgccagggga gcgcacttgg cgcctcggct gaaaagggca aattggcatt
     1081 tctccagcac ggctgctggc aatgccacgg ctatcaaggg caaggcggaa ttgcgggtct
     1141 gaaacttgcc cctaatccaa taccgttcga gaccttgtcc aacttcgtgc ggtcaaccaa
     1201 tcgcgccatg ccgccctatc gtgaggacat cctgtcgaac gatgatttgg cggacatcta
     1261 cgcgtatctg cagtcaatcc caaaggatcc ggaccccaag agcatcccgc tgctcaaccc
     1321 gtgatcggaa aacgcaggtt gattcgttaa ggaaaagtca ttcggatttt gcgccctacc
     1381 ctctctaagt cgggagatct cacccgcgca ggtagtgagg tcgcggtgag gcgacccgcg
     1441 caaagaacgc cagtcatacg ggcgcaatgc acgccctagg ggcttgcctg ccatgtcacg
     1501 ccttatgctt tgacaggcat gagacgttcc ctacaactcc tcttggcaat cccgtccgtc
     1561 tgattaatct tgtggcgccc acagaccaag ggttgccgtc ttgaacctgc ccaaccttat
     1621 taccattggc cgcattttgc tggtgccggt cgtcgtgtgg gcgattgcat ctcgtcagat
     1681 gcagatcgcg tttctggttt ttctcattgc cggcttgagc gatgcgatcg atggttttct
     1741 tgccaagcgc ctgggcatga cgagcgagct tggcgcccat ctcgatcccc tcgccgacaa
     1801 ggtgctgatc gtatcgattt acgtggcgct cggaataacg gaggcgatcc cgcgctggat
     1861 cgtcatcctg gtggtatcgc gggacatttt gatcgttggc ggcgttatgc tggcatggtt
     1921 tctcggcaag ccgatcaggg tcagaccggt gttggtttcc aagctcaata cggttgcgca
     1981 gattgtgttc gcgtgcctcg tactggcgtc actcgcgttc aacgtagcct tcaatctggc
     2041 cgaatacatc gtgatgtcga tggtggcggc attgacgctt gcatcggtgg ggttctatgt
     2101 gcgcgagtgg gtcctgcaca tgagcgcatc ggaactcaaa tcataagagc ggcgcagcgt
     2161 accgagctca cggccgtcgg cgttcaaggc tcgtcgtgct gcaaggcagt gcatcaaaat
     2221 cgatccggag cgtgattcgt tttactcgag gctgtggaga tttcttttat gacattcacg
     2281 cgtccgatgg cgttttggag cgccgcattg gcgagctttg tcgtattgat ctggctgctg
     2341 cacgaaattc tgctaccctt cgtcgccggc atggtactcg gctatctcct ggacccgctg
     2401 gcgaatcgga tcgaacggct cggagttggc cggctggctg ccgccatgct gattataggc
     2461 ctgagcggtt tcgccatcat ctttcttctg atcctgatgg ccccgatcct catcgggcaa
     2521 ttggcggcat tcgtggaaca acttcccgac tacgtatcgc ggcttcatgc gctggtcacc
     2581 gatccgaacc gtccctggct cacaaggatc ctcggcgcct ccttgggcga acaagacctt
     2641 tcggacgcga ccaaacaggc gagcaccgga gccctgctgt tcctgcattc actcatggcc
     2701 ggcggtcatg cgctggtgtc tgccttttgg ctcctggtca tcacaccggt ggtggcgttc
     2761 tatatggttt atgattggca gcggatcatc gcgacggtcg atggctggct gccgcgcacc
     2821 tacgccgaca ccatccggac actcgccaag gagatcgatt cagccatcgc cggatttatc
     2881 cgcggccaga ctggtatctg cctcatcatc gcctcgctct atgccgtcgg ccttaccatg
     2941 cttgggctga attatggcct cctgatcgga gctgtggctg ggtttttgag cttcattccc
     3001 tatgtgggat cgctgaccgg ccttctgctg gcggtcggcg tcgcacttgc tcaattctgg
     3061 cccgatgcga tttctattct gtcggtcatc ggggtctgca tcgtctgtca gtttctcgaa
     3121 gactacgtgc tggcgccaac tctggtcggt tcgatcatcg gtctacaccc gctgtggctg
     3181 atgttttcct tgttcgcgtt tgcctacctg ttcggatttg tcggcctgtt gttggcggtt
     3241 ccgctggcat cggcattcgc ggtgttgata cgattcgcac tcaagcaata tctcgcgagc
     3301 tcgctctatt ccggcaagga gttgcgatga gccgttccga tccggctacc ccgcgccagc
     3361 tcaatcttgc gctcggccat cgggagagct tcgatcgtgt ggattttctg tgcggacgcg
     3421 gcaacgaaac ggcactcgcc ctgatcgacc gctggaccga ctggccaaca cgtaccattg
     3481 cgttgaccgg accggagggc tccggcaaga gccatttggc ggcgatctgg gcaaaatccg
     3541 cgggcgggca ggttattgcg agccatatta tcgatgcccc atcagtgccg caggcactct
     3601 cgcgtggcgc attagcgatc gaggacgccg atcgcggcga actcgacgaa gcggcgctgt
     3661 ttcatctgct caatctcgca caggaacagt cggcttatgt cctcatcacg gcacggcagg
     3721 cgccggcgag ttggccgatc aagctagctg acctcgcttc acggctgcgc gctgtgccgc
     3781 tggtaacact cgacccaccc gacgatgcgc ttttggcggc agttctggtc aagctgttcg
     3841 ccgaccgtca gcttaccgtc gacgaacgac tgatcgaatt cctaatacat cggatcgaac
     3901 gtagcttcgc ggcggcacaa gccgtggtgg cggaactcga ttatgaggca atgcgactta
     3961 agcgccccgt caaccgggcg ctggctgccg aaattctgcg tggccgcggc ccgggacatc
     4021 cggggtaacc ctcatggaac agcaaccttt ctgtcatacg attgacgcgc tacagtatca
     4081 aacttccacc cataaagcct gaggcattta tggtcgacgc tgcccaagcc attgtcttgc
     4141 ctttcgaatc cgcgccggaa ttaaatcata acgacgccgt atccgaaccc cttacaccgg
     4201 ccgacggggc aagccgctac atcaacagag aattatcctg gctccatttc aaccgtaggg
     4261 tactggaaga agccgccaac ccgaaccacc cgttgttgga gcgtgtacgg tttctatcga
     4321 tttccgccaa taaccttgat gaattcttca tggtgcgcgt tggcggcctc aaaggtcagg
     4381 tgcgcgccgg catcgttacc cgcagtcccg acggtttgac gcctgccgag cagcttgcgc
     4441 gcatctcgga agccgtatcg accctcgtca tcgatcagca gaaccgctgg agcgaattgc
     4501 gcggcgaact tgccgccaag gacatttttc tggttgaaat cgattccctc aagaaagcgg
     4561 accgtaattg gctcgccgac cattttctcc gtaacatctt cccgctgttg acgccgctcg
     4621 ccatcgatcc ggcccatccg tttccgttca ttcccaacct tggtttctca ctggcactgc
     4681 agctcgaccg cgcgagtgac ggcaagccga tgaacgcgct gatccgcgtg ccgcccaaga
     4741 tcgaacgttt catcaggctg ccgtcgtcag cggaaaatgg cgcggtgcga cttatcacgc
     4801 tgcagcaggt aacgtcgctg ttcattgcgc ggttgttccc gggctacatc gtgaaagggt
     4861 atggcgcctt ccggattatc cgcgattccg atatcgaaat cgcggaagag gccgaagatc
     4921 tggtgcggca gtatgagacc gttctcaaac gccgccggcg cggaactgtc attcggttgg
     4981 agatggaacc cgcgatgcca gaggagctgc ggcgcttcgt gcaacgcgcg ctctcggcga
     5041 ccgacgatga ggtaattctg gtcgacggca ccttggcgct ggcggagctg tcgcagctta
     5101 ccaacctcga ccgcccggac cttgaattcg tgccctacaa tccgcggttt ccagagcgca
     5161 tccgtgagca agccggcgat tgcttcgcgg caatccgcca gaaggacctg atcgtccacc
     5221 atccttatga atcgttcgac gtggtcgtgc aatttctcca gcaagccgca cgcgatccgg
     5281 acgtagtggc gatcaagcag accctctacc gcacctccaa cgacagtccg attgtgcgga
     5341 cacttgcgga ggccgcggaa gccggcaagt cagtgacggc gttggtcgaa ctcaaggcgc
     5401 ggttcgatga agaagccaat atccgttggg cgcgcgacct cgaacgggca ggcgcccagg
     5461 tcgtctatgg attcatcgag ctgaaaaccc acgccaaatt atcgatggtg gtgcggcggg
     5521 agcgcggatc gctgacctct tatgtccatg tcggcaccgg caactatcac ccagtaacgg
     5581 cgcgcattta caccgacctg tctttcttca ccgccgagcc cgcgactgcc cgcgatgttg
     5641 ctcgtatctt taattacatc acgggttatg ccgagccggc ggatttggag cgtatgtcgg
     5701 tctctccatt aaacctccgc aagcgcatcc tcgatcatat agcgtcggaa gcgacgcacg
     5761 cgagggcggg ccgacctgcc gcgatctgga tgaagatgaa ttcgctcgtc gacccggtca
     5821 tgatcgatgc gctctatgag gcgtccgccg cgggagtggc tgttgaattg gtcgtacgcg
     5881 gcatttgctg cctgcggcct ggcgtttgcg gactttcgga gaatattcgc gtcaaatcga
     5941 tcgtcggccg ctttctcgag catgggcgca tctattgttt cggcggtgga catggtttgc
     6001 cgcaccccaa ggcggccgtc tatatttctt ccgcggattt gatgccgcgt aatcttgatc
     6061 gccgtgtcga agcactgtgc ccgatcacca atccgacggt gcatcaacaa gtgcttgatc
     6121 agatcatgat cgccaacatc aaagacaatg agcagagctg ggcgctcttg tcggacggta
     6181 cgtcagtgcg tatgaatgcc gccaccggcg aggagccgtt caatgcacac aagtatttca
     6241 tgaccaatcc aagcttgtcg ggacggggcg aatccctcaa gaaatcctcg ccccgcaggc
     6301 tcacccagcg gcgtaatctt gaatgaattt tagtgcggcg ggcgtcggtc ggacggccaa
     6361 gaggacgtcc gaaatcgcgg cgcagggccg aatcgacaat ggccccccga tcgctgtcat
     6421 cgacatcgga tcgaattcgg ttcgcgtcgt ggtctatgag gggctgaccc gcagcctgac
     6481 gccgattttc aacgagaagg ttctggccgg gctcggtcgt gaggtgctga ccaccggctt
     6541 gctcacgacg gatgcgatcg ataaggcgtt ggcagcgctg cggcggtttc gcgccttatg
     6601 cgatgccatg cgcgtaggcc acgtgtgggc gatcgccact gcggcgtgtc gggatgcccg
     6661 caacggaccc gcgttcatcg tcgaggccga aaaagcttgt ggcgcgtcga ttgaggttct
     6721 gtcgggccga cgcgaagcgg aattgtcggc gctcggcatc atctcgggat tccacaagcc
     6781 cgacgggatc gtcggcgatc tcggcggcgg atcgttggag ttgaccgacg tacgcggacg
     6841 caagctcaaa tccggcatga cgcttccact cggcggactc gctttgcagg atctgtcggc
     6901 aagatcgctc gccaaggcgg aaaagatcgt ccgcgacgcc ctcggccatg cggcgttttt
     6961 gaaaggcggc cgcgaccgtg acttctacgc cgtcggcggc acctggcgct cactcacgcg
     7021 gctacatatg tggcagatcg gctatccgct tcacgtgatg cacggctatg cgatcccggc
     7081 gtcggaagcc atggaatttt cgcgtctggt gcgccgcgtc gacccggaaa cgctttccaa
     7141 gatcgaaacc gtaaccgcgg cgcgccgtcc gctactcgcc tacgcggccc tggtaatgga
     7201 gcatgtggtg cgcatcgcgc ggccgcgccg catcgtagtg tccacgctcg gggtacgtga
     7261 gggcctgctg ttcaccgcac tcggcgacac cgagaaaaaa cgcgaccccc tgattgcggc
     7321 agcgcaggaa cttaacgtgc tgcgttcgcg ctcgcctcgt catggcgagg aactggcaga
     7381 ctggagcgac aaattcatga cgaccaccgg cctcggcgag accggcgatg aaaagcgcct
     7441 gcggcgcgct gcttgcctct tggccgacat cggttggcgg gcgcatcctg actatcgcgg
     7501 cgagcaatcg ctcaacatca tctcgaacgc ggccttcgtt ggcgtcgatc atccgggccg
     7561 ggcattcatc gcgctcaccg tgtacttccg tcacgtcggt ctggccggtc tggccgacga
     7621 cgaattgtcg cctcatgtgc gcgaactggc aacttctcgc atgattgatc gcgcccgcgt
     7681 gcttggcgcc gccatgcggg tggcctatct ggtgtccggc gccatgccgg gcgtgctgcc
     7741 caacacgccg ctggtggtgg agcgaggcaa cctgaaactc aagctgtgcg gcaagtatag
     7801 cagcctcgct ggcgaacgtc tgttcgcacg actcaaacaa ctcgcgcgac tgatcggccg
     7861 tgaggccaca atggtgacgg ggtagctcgt aaatctgccc tgcgcgcccg cggcactctt
     7921 ttttacgaat cagccatggc ggattcgtat tgcgcgctca acgccaacca ccggtcctcg
     7981 gcggctgcga gcgcgcttgc tgccgcagcg cgctccttgc tcaaggtcgc aacgcgtgac
     8041 ggatcgcgac catagagttg ggcgtcggcc aaaatggcgt cgatctggtc gattttcttg
     8101 gtcagcatgg cgatcgtttt gtcgaactcg tcgatgcgcc gcttaagggg agcgagttca
     8161 ctacgttttt cggcggctgc gcggcgcaga tcggcacgag tggtgcgccc ttcggcagcg
     8221 ctgttgcgct ctgcaggcag gcctgcgctg ccgccgagca caaggcggcg atagtcgtcg
     8281 agatcgccct cgaacggatt gacctcgcca ttggcgacaa gccacagccg ctcgacgcag
     8341 gtctccaaca gaaaacgatc gtgggagacc aggatcacgg cgccggaata atcgttaatg
     8401 ccctcgatca aagcggcacg gctatcaatg tcgagatggt tggtaggttc gtccagcacg
     8461 acgagatccg gcccctcgaa ggtcgcaagg ccaagcagca ggcgtgtctt ttcgccgccc
     8521 gacagatgcg ccaccttggt atccgccatg gtggcgggaa atcccagccc gccgacacgc
     8581 gcccgaaccc tcgcctcagg cgcatccggc atcagccggc gcacgtgatc gtaggcgctg
     8641 gcctgcggat taagttcgtc aagctgatgc tgagcaaaat atgcgacctt gagcctttcg
     8701 gcgcgcgtca tcgtgcccga gaatggcgcc aaacgtccgg tcagaagctt tgttagggtc
     8761 gactttccat tgccgttagc gccaagcaat gcgatccggt cgtcggcgtc aatccgcagc
     8821 gtaagccgtc gcagcacagg acggcccggc tcatatccga ccgtcatgtc gtcgagtgca
     8881 atgattggcg gcgacagcgg cttctccgga gaggggatgg tgatcgcgcg cgcctcgtgc
     8941 tcgacgagca cgtcaatcgg ctgcattttt gccaagagct tgaggcgcga ttgcgcttgg
     9001 cgtgccttgg aggctttggc gcggaagcgc tccacgaagg cagtgagatg ccggcgttgc
     9061 gcttcctgct tgcgggcgag gctctcgtcg agggcaaggc gctcgttacg ctggcgttcg
     9121 aaggatgtgt agttaccgcg gtagaaggtg agcttggcgc gttcgagatg caggatcgaa
     9181 tcgaccgcac tgtcgagcag atcgcggtca tggctgataa cgatgacggt gcgcggatag
     9241 cgcgcgatgt ggtcttcgag ccataacgtg ccttcgaggt cgagatagtt ggtgggctcg
     9301 tcaagcagca acaaatccgg ctcggcaaac aggaccgccg caagcgccac gcgcatgcgc
     9361 catccaccgg agaattccgc gcaagcgcgt tgctggtccg catgcgaaaa accaaggccg
     9421 gcgagaatgc ccgcggcccg tgcgggcgcc gcgtgggcac cgatgtcggc aaggcgcgac
     9481 tggatctcag cgatgcggtg tggatcggtc gcggtctcgg cttcctggat gagaaaggtg
     9541 cgctcacgat caccggccag aacaaggtcg atcaggcgct ccggaccgga cggtgcctcc
     9601 tggggcagct ggccgagcga ggcgcgcgcc ggccgggcga agctaccatg ctcgaccgcg
     9661 atgtcgcccg caatggcgcg gaacaacgtg gattttccgg tgccgttgcg tccgaccagc
     9721 ccgacccggg cgccgtcggg gatctgcgcc gtcgcccgct cgatcaggag ccggccggcc
     9781 acacgcagcg aaatatcgtc gatcaccagc atggtgttgt atgaccgcat cgtcgcgtgt
     9841 tgcgcaaccc acaacgcgag tgccactgga ccgcgggtga gccgcccgct ctcttaaaaa
     9901 aaagcggacg agccgcctgc ggtccgatcc ctgcgtcagc aagcctgttg ccagcgccaa
     9961 ctttgcgaaa gaaaatcggt tgcagtcgga agtgcagcgt gccgacggga cggagagacc
    10021 atgtgcgtcg ccgggtgtga aatgacggtc cgggcagcgt tgagccgacg cgtttttttc
    10081 cagggggtgg ccgcggccgg atttaccgcg acggcggtgc ccgcgaacgc gcaagcgaga
    10141 ggtttttcca aggcagtgga tctcacccac accatgtcgc ccgagtttcc gaccttcatg
    10201 ggcaagcccg gcatcgagat gcagcgtgaa ttcgaattca agaaggaccg cttcaattta
    10261 ttctggtggc acgttatcga acatgccggc acccatcttg acgcccccat ccatttctcc
    10321 gagtcgggtt tttcagccga ccaactgccg gttgaacagc tggtcgtccc gcttgcggtg
    10381 gtcaacgtca tttaccaggc cgaacaggat gccgactatc agctgtcccg cgaggacttg
    10441 gtcaaatggg aggctcagca tgggcggctg ccggcaggct gttgcgtcgc cttgcactcc
    10501 ggttggggcg agcttgcgac cgccgatcca gcgcgcttcg ttgggcgcga cgtcaacggc
    10561 acgttacact tcccgggctt tgccccggaa gctgccgcat ggctaatgaa ggagcgcctc
    10621 gtggccggcc ttgcggtcga taccatgtcg ctcgaccatg gcccgtcccg ggatttcaag
    10681 acccaccaac tgtggttgcc gtcgggtcgg tgggggctcg aaaacgtcgc caatctcgac
    10741 aaggtaccgg aggcaggtgc aactcttgtg gtcggcgcct cgaaggtgaa ggattcgacc
    10801 ggtgggctgg cgagggtgat tgcgttggta tgagaacccc cttcccggtt ttccgggagg
    10861 gcgcgccaag cgccaggtga taccggcaaa acctttgcgg cggaaggagc cccacccgaa
    10921 gaccgaggga gaaagtaaaa atcgagcagt atgcgatccg cgccgcccag acattcgtga
    10981 taccggcccg tgaagcgcca tcgcgtgccg caccagctta acgcgctgtt ttgggcagtt
    11041 gatgcatcaa ataggttcct tgacgttccg ctttgattta aatcacgacg cgattcaatt
    11101 ggctcgattg gcggtgcggg ttagcatctc acgatgcgtc gtgtcgtgtt atgttatgcg
    11161 tgcggtccaa ggggtggatc atcaggggag cgattagatg aattatctga acgacaagag
    11221 gttgttgtgc gagctcatcg gcacggcgac cttgattctg gtgggctgcg gtgccgtcac
    11281 gattggggga tttggctcgg cttttccggt cggaattctg ccggtagcac tggcgttcgg
    11341 cctaacggtg atggcgatgg cctatgcgat cgggccggtt tccggctgtc atatcaaccc
    11401 ggccgtcacg gcggcgatgt gggccgccgg gcgaaccaac ggtgcagatg ctatcagcta
    11461 tgtggtggcg caggtaatcg gcggcatcct gggagccgcg atcctcgtgg tgatcctgaa
    11521 gggcaagatc gccggctacg atgtaatggc cgcgggcttg ggtcagaacg gatggggcgc
    11581 cggctacctt ggaggctttg gcctaacctc cgcaatgctg acggaattag tcgccacatt
    11641 cttgttcacc cttgtgatcc ttggcgccac cagccaaaaa ggcgcgacgc cggtagcggg
    11701 cctgatcatc gggctcactc ttgtggtgct gcatttcccc ttcatcaacg tgaccgggct
    11761 atcggtaaat ccggcgcgta gcctcggtcc tgcggtattt gtcggcgcaa atgcgttggc
    11821 gcaggtgtgg ttgttcctcg tgtttccgac cctcggcggc ttggccgcgg gatggctcgt
    11881 caagtcgaaa acgctggata tttagcccga agtcccccac gtggcgccgg tttttgccgg
    11941 cgcctcgcgc ggacgcgcca attcactcgt cccattcgat ggtgccgagt tcccacttcg
    12001 ccttgacctt ggcagatttg cgaatcaggt cgtcgatagc ggtaattggt tttttgtccg
    12061 gattaacttt gcaaaatgct tgcatcagcg tcagcacctt ggtgtcgtcg aacgcgctca
    12121 tgtcgacgtg gtggccgtcg tcttccaaca aggcgatatt tgcggcactc atgtagccct
    12181 gtacccaggc caccagcagt aagttgatcg gattgcttaa tccctcagcc ggcttgatgt
    12241 cctcggcaag ctgttcgcaa tttgaggttc cgataccttg gctgatcagc ggctcagctg
    12301 ccgggacgcc cggcgtgccc gccatagcga ccaccgccaa cccaattgcc gcaaaggcgg
    12361 tgttcctaaa attggcagtc atgccaaaaa cctcctgaat attcctaaag cttccttaca
    12421 accgccttat aacgcgaaat acgccgcgcg gtcttgcttt caactggtgc agatacggct
    12481 tttccacatg gtccagggcc gctggaaatt ggtgtcgcgg cggctggtga tcaactcgca
    12541 ttcctccggc tccaaaaaat tgatcggccc gccaagggca atcgcctgcg cctgcaacct
    12601 ggcgttgacc tcggtatata cggcacggta aaccgccgtc atgatattgg ggccgacgca
    12661 aacgttgccg tgcccgcgca tcagcgcaac gtcatgcgaa cccaggacgc tggccagtcc
    12721 cgctccgtgc ttggcgttgc ggatcaacag atctgtcatg ccgtcacagt cccggatctc
    12781 gaaattcgga acgtcttgct tgagaaacgc cgacatgtgg cagatcggcc gcaacttgac
    12841 ggaggtaacg ctgaacggga tgacagttgg cgagtggctg tggacaaccg cattgacatc
    12901 ggggcgtgct ttgtagattt cgccgtggat gtatcgctcg atatacatga gtcggccttg
    12961 ctggtcgacc ggattggaat cgaggtcgta ttccatgatg tcctcggccg tgatgatcgc
    13021 cggggatttg gaacgcgaca gaaaatagcg atctgcggcg ctgccgtggc gcatgctcac
    13081 gtgaccatag ccgtcgagaa cgccttggtc agcgagaatg cggttggcag cgataagatc
    13141 gtcgattgcg acggggtcgg caggaccgcc ggatcgtggg gcagcgccgg aacttgcatc
    13201 gttcatgtgg attctgacca atgctgagat gaggaaggcg ccaaactaac gatttcgcat
    13261 gcagccgcca aatcggtatt atggtggcgg cagaagggat aggcgtacca caaagggttg
    13321 tggcacgcaa aggtgataca tctagttgtt cgcagcccat tgttgtatgg ctacggcata
    13381 ccgcagaaat ccacgagagg ccagaaaatg ctggaaattg atgcggcaac gggaactttg
    13441 acaattccga tctgggcggc gggagcagga tcggccgtct tcttggctag catcgtgttg
    13501 gcgatcggtc gggcgggcgc gggcgcattg ataaacgctc tgtttcgcat tgggatcgta
    13561 gtcatcgtgc tttccgcggg ctggttctat atgcaacgca ccgagcaaca ggagcaggcc
    13621 accgagcgcc ggttgctcag tgaacgtttg gcggctttgc tgacgcgcgc ggtcgcaccg
    13681 ggctcggcgc tgtcctgcct tgatgagctt gccggcgagg ccgtcgaagt cgcgtgcgaa
    13741 aaagctgtgt tcgccagtcc ggaggctgtc gcgaacgcag tgacctacat cacagccaaa
    13801 ttggccgtgc tggctgacgg cagcgaatat gcgcggcgcg ccggaactgc ctttgcggcc
    13861 gagttagtgc cgctgcgcgc ggcgctcgag cttgatcgct ttggcatcgt cgcccacgtt
    13921 ttggccaagc gctatggctg cacggcagac aaatgcgata tcttgagctg gtttagcgac
    13981 cacagccatg tgcttgctaa tttgcgcgat catacctttg acgaacacgt aacgaaattt
    14041 gcagccaatt ggaacggccc gcctcgcacc gccgctgacg cgacggcagc tgtggcgccg
    14101 acggctgcag taccggtctc tccacgatat gatttcccgt cgtctcagtc gattccgccg
    14161 atcaacatca tggtgcccga agcgccggcc tcaagggtcg gcgccgcatc tggtgggcaa
    14221 ccggcatcgg cgcccgcaaa tgacaattcc cgctccgcga tcacgcccgt gccgccacgc
    14281 cggcctccgc aaggacgcac tgcccctgcg gtggctggat cgcgcccgcc cagtccgccg
    14341 cagcccgctg tgccgatcgc cgtcggcgag gcgccaaccg acggcgcggt gccgcatccg
    14401 tctggcccgg cggagccacg atagagac
//
LOCUS       DATILV010000994         5517 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_759892, whole genome shotgun sequence.
ACCESSION   DATILV010000994 DATILV010000000
VERSION     DATILV010000994.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5517)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5517)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5517
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_759892"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(134..1843)
                     /locus_tag="VLJ17_24080"
     CDS             complement(134..1843)
                     /locus_tag="VLJ17_24080"
                     /inference="COORDINATES: protein motif:HMM:NF006203.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-requiring protein"
                     /protein_id="HSV26091.1"
                     /translation="MTDSAARMTAESFLSRLADRGVEYVLANAGTDFAPIIEALSRNP
                     GSNRKYPRVITVPHENVAVAMAHGYYRVSGKPAVVMVHVTVGTANAVCALMNAARDNV
                     PIILGAGRTPLTETGHAASRNRSIHWGQEMFDQGGLTREFVKWDYELRAGQPADSVVD
                     RALDIAMSEPRGPVYLTLPREVLADPAVPPRRDTVRPLGASPAVPSFAAVELAAAILS
                     AAEFPLILTSSVGRKPEAMTELAALADEFAIPVVQSEARDISLPTDHPMCLGFDPSAL
                     LAMADAVAVFDSAVPWIPRLHPLKQDAKIICFGPDPLFTRYPFREFEADLLVTGESGA
                     ALTMLRESLSHAMRGRVATIEGRRRALGEARQQMIARRKNLVEQVKDQTPIHPLYLAS
                     CLNALKAKDAIIVNELGLPVGGLDLTTPRSYLGSSLAGGLGFGLGGGLGAKLAAPERE
                     VIAAVGDGSYYFGNPLAYHYVSRAEKLPTLTIIANNHAWHAVRQATRDVYPDGHASKA
                     NAMPLVDLNPAPDFEKVAESCAGFGEKVTTPEQLMPALRRSFDAVRSGTPALLNVTTQ
                     NRG"
     gene            2903..3085
                     /locus_tag="VLJ17_24085"
     CDS             2903..3085
                     /locus_tag="VLJ17_24085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26092.1"
                     /translation="MPSINLSLIKDGNDNDVSQVTGQAGLILEIDPPGGPNGNNWGFK
                     AGWGGFLGLTGTYTLE"
     gene            complement(3097..4308)
                     /locus_tag="VLJ17_24090"
     CDS             complement(3097..4308)
                     /locus_tag="VLJ17_24090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV26093.1"
                     /translation="MRSPELASEGSKPSSPIPTRVALLWLAGNGMRMTILAVPPLIPF
                     IHRDLNMSETEVGILAGLPVVLFACAAVPGSLLIARFGAIATVVAGLLITALGSALRG
                     AAPNVPALYAATVVTGFGVAVMHPSMPPLARMWLPDRTGFATAVYANGLLIGEILPVA
                     LMLQVVLPLVGGSWRLGFVFWAVPCTMIAAIIFVAAPRRHHPDNSAFRLAPQWWPDWS
                     SSLLWRLGLILGGANASYFTTNHFLPDYLNQTGHADLIDTALVVLNVVQLPVSLLLLW
                     LAGRFERRSATYLLLGAGAVLGALGIILGSGPIILASAGLIGVSTASVLILILSLPPL
                     LSRQEDVPRMAAGMFTISYSCAVIVPILSGIAWDLTGLPAAAFVPMAMMALLTVALAP
                     TLRLSGRTRVA"
     gene            complement(4375..5196)
                     /locus_tag="VLJ17_24095"
     CDS             complement(4375..5196)
                     /locus_tag="VLJ17_24095"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSV26094.1"
                     /translation="MKRLFAALWLMSSLTVGAAWAQPYAPNEAGVTMGHWHLNSRDVE
                     VNKKIFLGMGGTEGGPGPLQRVTFPGVVVILNQQAGTPPATGGTVGSVVNHVGFIVQN
                     VQESVAKWKAAGVPVEPGNNNRLDQAYVTTPDGLRIEILENKNQNVPIRHEHVHFFLP
                     EAAVAESQAWYGKIFGAKASLRNNAPVADIPGAQLRFNKAEAAQVPTKGRILDHIGFD
                     VTDLQGFIKKLEAAGIKLDRPYSKNEQSGVALAFITDPWGTYIELNERPKPVYLP"
BASE COUNT         1140 a         1692 c         1681 g         1004 t
ORIGIN      
        1 ctctcccgac ttccggaagg gcggcacgaa gcggcgcgtg gggcgacagc aagcaaagcg
       61 gtgcggtgga aaagatcccg accctccccg aaagacgagg aagaacaagc aagcgccccg
      121 gctctggagc ctttcatccc cggttttgcg tggtcacatt caagagcgcc ggcgtgcctg
      181 accgaaccgc gtcgaatgaa cgccgcagcg ctggcatcaa ttgctccgga gttgtcacct
      241 tctcgccaaa cccagcgcag gattccgcaa ccttctcgaa gtccggtgcc ggattgaggt
      301 cgaccagcgg catggcgttg gccttgctgg catggccatc cggatagacg tcgcgggtcg
      361 cctgccgcac cgcgtgccaa gcgtgattgt tggcaatgat agtgagcgtc ggcagctttt
      421 cggcgcggct cacatagtga taggcgagcg gattgccgaa gtaatacgag ccgtcgccaa
      481 ccgccgcaat cacctcgcgt tcgggagcag ccagcttcgc gccgagcccg ccgccaagcc
      541 caaagccgag gccaccggcg aggctcgatc ccagatagct gcgcggggtg gtgagatcca
      601 agcctccgac cggaagcccc aactcattga cgatgatggc atccttcgcc ttgagcgcgt
      661 taaggcagct ggcgagatag agcgggtgga tcggcgtctg gtccttgacc tgctcgacca
      721 agttcttgcg ccgggcgatc atctgctgtc gcgcttcgcc aagtgcccta cgccgcccct
      781 cgatcgttgc cacgcggccc cgcatcgcgt gggagaggct ttcacgcagc atggtcagcg
      841 cggcgccgga ttcacccgtc accaggagat cagcctcgaa ctcccggaac ggatagcgcg
      901 tgaacagggg atccggcccg aaacagatga tcttggcatc ctgcttgagc ggatggagac
      961 gtgggatcca cggcaccgca ctgtcgaaca ccgcgaccgc gtcggccatg gcgagcagcg
     1021 ccgacggatc gaagccgaga cacatcggat gatcggtggg taggctgatg tcgcgggcct
     1081 ctgattgcac gacaggaatc gcgaactcgt cggccagcgc ggccaactct gtcatcgctt
     1141 cgggtttgcg accgacggat gaggtcagga tcagcggaaa ctccgcagcc gacaggatcg
     1201 cagctgcaag ttccaccgcc gcgaaggacg gcaccgccgg gctcgcgccg agcggtcgca
     1261 cagtgtcgcg ccgcggcggc accgccggat ccgccagcac ctcgcgtggc agcgtcagat
     1321 agaccggccc gcgcggctcc gacatggcaa tatccagcgc gcgatcgacc accgaatcgg
     1381 ccggctggcc ggcacgcagc tcgtagtccc attttacgaa ttcgcgggta aggccgccct
     1441 ggtcgaacat ctcctggccc caatggatcg aacggttgcg cgacgccgca tggccggttt
     1501 ccgtgagcgg cgtacggccg gcaccgagga tgatcgggac gttatcgcgc gcggcgttca
     1561 tcagcgcgca taccgcattg gcggttccga ccgtcacatg caccatcacg acagcgggct
     1621 tgccgctgac cctgtaatag ccatgcgcca tcgcgaccgc gacattctcg tgcggcaccg
     1681 taatgacgcg gggatatttg cgattgctgc cgggattgcg cgatagcgcc tcgatgatcg
     1741 gagcgaaatc ggtgccggca ttggcgagca cgtattcgac gccgcgatcg gcgaggcggg
     1801 agagaaagga ctcggcggtc atgcgtgcgg cactatcggt cacggaattt cctcggttta
     1861 tcggcggaca agcggatggc agttgcacca ttgtacatgc cgcggccctg gtgcggctag
     1921 tgaggccgaa catgaagcca gtctcatcag tcgcaacgca accgcggcca tcagcacgca
     1981 tggagccggc atcatcgtat tctccgcgtc cagcaaaatt atccggtgtg gtgaacttgg
     2041 ccacaaccga atgcaactaa tgaaaatcga cagaaaaccg taaagcggac gtctcctgct
     2101 agccccgagg ggccactata cgcagaccgg tcgttctcgt tgcgcctgcc ttgcggttta
     2161 aaaaggaggc ggaaatgagc atcccgagga cgcttcgcat gccgatgcgc ggcccggagg
     2221 tcacctttca attatcacct tcctccaccg gacgaccagc ttccactcac cggaccagga
     2281 gcggcggatt tcgctcctcg caccgaggcg aaggtcaaga agtttcagca gatcaacaaa
     2341 atcgatttcg gcacaaaaga tttcatgtat ggcgtggttg gcccacatac ttggccagaa
     2401 ctaacgaaaa cgcagcaaat cacggtcact atcgtgccgg aaaatcgccg agcggactgg
     2461 agcgaccgat tgaacggcat tttcatctgg gaccacaact cacaccgccg tctatcacac
     2521 ccttcacacc gtcccctctc attcctgcaa acaatcctcc gcccccgggg ctggtgcttg
     2581 acagcattca gcttcaggcg ggcggtcagg gcacactacc tttctctttg cactggcgag
     2641 aatggacggg ctcgctatcg ctgcagattg ttgcggtcct tctacacagg gaatacaaga
     2701 aggtgtttca caatgagctt caatttggcg cgtcgtacct tgagaatcgt ggccccggtg
     2761 ccaatagcag gagagatctc aattttctcg ctgttctgaa tcaagccaac atccccggct
     2821 tgggagacgg acgatggagc tgggggatcc aggaacagct agccctgacc aagagcctcc
     2881 gggatcaatc cagggttcgc tcatgccatc gatcaattta agcttgatca aggacggcaa
     2941 cgataacgat gtgtcgcaag ttacgggaca agccggcctc atactggaga tagatccccc
     3001 cggcggcccc aatggcaaca attggggttt caaggctggg tggggtggtt ttttgggact
     3061 gaccggcact tataccctgg agtgaagcga catctatcac gcgacccggg tccggccgct
     3121 taggcgcagc gtgggcgcaa gggcgaccgt cagcaatgcc atcatggcca tcggcacaaa
     3181 tgccgctgcc ggcaggccgg tcaaatccca ggcgatgccg ctgaggattg ggacgatcac
     3241 ggcgcaagaa tagctgatgg tgaacattcc ggccgccatg cgcggcacgt cttcttgccg
     3301 gctcagaagg ggcggcagcg acagaatcag gattaggacc gacgctgtgg aaacgccgat
     3361 cagcccggca gaggcgagga tgattggacc actgcccagg atgatcccga gcgcgcccag
     3421 cactgcgccc gccccaagga gcaggtaggt tgcggaccgc cgttcaaatc ggccggcaag
     3481 ccacagcagt aacaacgata ccggcaattg caccacattg agtaccacaa gggcggtgtc
     3541 gatcagatcg gcatgcccgg tttgattgag atagtcgggg agaaaatgat tggtcgtgaa
     3601 gtacgacgca ttggcgccgc ccagtatcaa tcctagccgc cacagcaagc tgctgctcca
     3661 gtccggccac cattgcgggg cgaggcggaa agcgctgttg tctggatggt ggcggcgcgg
     3721 tgcagcaaca aaaatgatcg ccgcaatcat ggtgcacggg acggcccaga acacgaagcc
     3781 gagccgccaa ctgcccccga ccaagggcag caccacctgc agcatcaatg ctacgggcag
     3841 aatttctccg atcaatagcc cgttggcata aacggcggtc gcgaagccgg tgcgatcggg
     3901 cagccacatc cgggccaaag ggggcatcga gggatgcatc acggcgacgc cgaatcccgt
     3961 tacgacggtg gcggcgtaaa gcgccggcac gttcggggcg gccccgcgta gcgccgagcc
     4021 gagcgcggtg atcagaagcc cggcgaccac ggttgcgatc gcaccaaagc gcgcgatcaa
     4081 tagcgacccc ggcacagccg cgcacgcgaa tagcaccacc ggcaggccgg ccaggatgcc
     4141 gacctcggtc tcggacatgt tcaggtcgcg atgaatgaac ggaatcaatg gcggcaccgc
     4201 caggatcgtc atccgcatgc cgttgccggc gagccacagc agggctacac gggtcggtat
     4261 cggcgacgac ggcttgctgc cttcgcttgc cagttcaggt gatcgcatca gggggctccg
     4321 gcacggtatc ctcaagcggc cgaagcacca cctgtggctg ttttagcggc gtgtttacgg
     4381 tagataaact ggcttcggcc gttcattcag ctcgatgtaa gtaccccagg gatcggtaat
     4441 gaacgcaagc gcgacgccgc tttgctcgtt cttgctgtag ggccgatcca gcttgatgcc
     4501 agctgcttcg agcttcttga tgaagccttg caggtccgtg acgtcaaagc cgatgtggtc
     4561 aagtatccgc cccttggtgg gaacctgcgc cgcttcggcc ttattgaagc gcagctgagc
     4621 acccggaata tccgcaactg gggcgttgtt gcgcaaactt gccttcgcgc cgaagatctt
     4681 cccataccag gcttggcttt cggccacggc ggcttccggc aggaagaagt ggacatgttc
     4741 atgccggatc ggcacgttct ggttcttgtt ttccagaatt tcgattctca agccgtccgg
     4801 cgttgtcacg taggcttgat ccagcctgtt gttgtttccg ggttctaccg gaacgcccgc
     4861 ggccttccac ttggcgacgg attcctggac attctgaacg atgaatccga cgtggttcac
     4921 caccgatccg accgtgccgc cggtcgccgg cggtgtgccc gcctgctgat tcaaaatcac
     4981 cacgacgccg ggaaatgtga cgcgctgcag gggaccaggg ccaccctcgg tgccgcccat
     5041 gccaagaaag attttcttgt tgacctcgac gtcgcgcgag ttgaggtgcc agtgtcccat
     5101 agtcacgcca gcttcgttag gggcgtaggg ttgcgcccag gctgcgccca ctgtcaggct
     5161 cgacataagc catagtgctg caaataatct cttcatcgct acctcccggt tgatctcaca
     5221 tcggtgcgtg cgagcgacca gacattagca cctgtggggc gttttaaaaa attcgaatca
     5281 tgtcaacgca ccagactgcc gggttcgtag cctgactgaa ggaactgatt cttcgcggct
     5341 ccgcaatccg gcaatcgcga taatgaaccg ctggtgcccg atttatactg ctcgatccgg
     5401 gcttccccta ttgcgatccg aggcaagcga aacagatcgg ataggctcaa gccccttgcg
     5461 gatcagcacc gatgcaagcc gggggtcggc cagataggag atgagcttct cggctcc
//
LOCUS       DATILV010000995         1713 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3831435, whole genome shotgun sequence.
ACCESSION   DATILV010000995 DATILV010000000
VERSION     DATILV010000995.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1713
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3831435"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..838
                     /gene="secY"
                     /locus_tag="VLJ17_24100"
     CDS             <1..838
                     /gene="secY"
                     /locus_tag="VLJ17_24100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HSV26095.1"
                     /translation="TGGTMFLMWLGEQVTSRGIGNGISLIILSGIVAELPSAIAGTLE
                     LGRQGALSTGLILIVVVMAIAVIAFIVFMERAQRRLLIQYPKRQVGNRMFEGQSSHLP
                     LKLNTSGVIPPIFASSLLLLPTTVANFNAGRIPDWLGAITAQLGHGRPLFLVFYVALI
                     VFFAFFYTAIVFNPTETAENLKKHGGFIPGIRPGERTAEYIDYVLSRITVIGALYLAV
                     VCVLPEILISYAAVPFYFGGTSLLIVVSVTMDTVAQIQGYLLAHQYEGLIKRSKLRGR
                     RR"
     gene            885..>1713
                     /locus_tag="VLJ17_24105"
     CDS             885..>1713
                     /locus_tag="VLJ17_24105"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0019205 - nucleobase-containing compound
                     kinase activity [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HSV26096.1"
                     /translation="MRLILLGPPGAGKGTQALRLVDQYKLVQLSTGEMLRAAVRAATP
                     VGLKAKDIMARGELVPDDVVVAIVADRIEQPDARNGFILDGFPRTVPQAEALDRLLNQ
                     KGLTLDAVIELKVDQGILLKRVENRVAEMVARGEPLRPDDNPESLKKRLDAYRAQTAL
                     LIDYYTRQGVLRTVDGMASIEKVSAAIAAQLDRDPDGAVSMLARRRPTAPRTAATRKA
                     AQRRSARRPPAPRATAARVSTTKPTAAVGRKAKAKSVEKSSVEKSSVEKSSVEKSSVE
                     "
BASE COUNT          315 a          522 c          529 g          347 t
ORIGIN      
        1 cacgggcggc accatgtttt tgatgtggct cggcgagcag gtcacctcgc gcggcatcgg
       61 taacggcatt tcgctcatca ttttgtcggg cattgtggcc gagctgccgt ctgcgatcgc
      121 tggcaccctc gaacttggcc gtcagggcgc gctgtcgacc gggctgatcc tgattgtggt
      181 ggtgatggcc atcgcggtga tcgccttcat cgtgtttatg gagcgggcgc aacggcgcct
      241 gcttattcag tatcccaagc gccaagttgg caaccgtatg ttcgaaggcc aatcgtcaca
      301 tctgcccctc aagctcaata cgtcgggcgt cattccgccg atcttcgcat cctcgctact
      361 tttgctgccg accacggtcg caaacttcaa tgccggccgg attcccgatt ggctcggcgc
      421 catcacggcc cagctcggcc acggccggcc tctgtttctt gtcttctacg tggcgctgat
      481 cgttttcttc gcgttcttct acacggcaat cgtgttcaac ccgaccgaaa ccgccgaaaa
      541 tctcaagaag catggtggct tcatcccggg catccggccc ggcgagcgga ccgccgaata
      601 catcgactat gtgctgtcgc gcatcacggt gatcggagcc ttatatcttg cggtcgtctg
      661 cgtcttgccg gaaatcctaa tctcctatgc ggcggtgccg ttttatttcg gcggtacgtc
      721 gctgttgatc gtggtcagcg tgacgatgga tacggtcgcg caaatccagg gatatctgct
      781 tgcacaccaa tacgaaggcc tcatcaagcg atcgaagctt aggggccgac gccggtgata
      841 agcacgccgg ggggcgggct tgtgaatatg ggggctaacg cgcaatgaga ttgattcttt
      901 tgggtccacc gggcgccgga aagggtactc aggcgctgcg cctggtggac cagtacaagc
      961 tcgttcagct gtcaaccggc gagatgttgc gcgccgccgt aagggcggca acgccggtcg
     1021 gcctcaaggc gaaggacatc atggcgcgtg gcgaactggt gcccgacgat gtcgtggtgg
     1081 cgatcgttgc ggatcgtatc gagcaacccg atgcgcgcaa tggcttcatt ctcgacggtt
     1141 tcccccgcac ggtgccccag gctgaggcgc tcgaccgctt gctgaatcaa aagggactta
     1201 ccctcgacgc cgtgatcgag cttaaggtcg atcagggtat cctgctcaaa cgggtcgaaa
     1261 accgggtcgc cgaaatggtc gctcgtggcg agccgctgcg tccggacgac aacccggaaa
     1321 gcctcaagaa gcgccttgat gcctatcggg cccaaaccgc gctcctgatt gactactaca
     1381 cccgccaggg cgtgctaagg accgttgatg gaatggcgtc catcgagaag gtaagcgctg
     1441 ctatcgcggc gcagttggac cgggatcccg acggggcggt ctcgatgctg gcgcggcgtc
     1501 ggccgactgc gccgcgcacc gctgccaccc gcaaggcggc tcagcgtcga agtgcccgaa
     1561 ggccaccagc cccgcgggcc actgcggccc gcgtcagcac cacaaaacca accgcggcgg
     1621 tcggccggaa ggcgaaggcc aagtctgtcg aaaagtcgtc tgtcgaaaag tcgtctgtcg
     1681 aaaagtcgtc tgtcgaaaag tcgtctgtcg aaa
//
LOCUS       DATILV010000996         1520 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_3570750, whole genome shotgun sequence.
ACCESSION   DATILV010000996 DATILV010000000
VERSION     DATILV010000996.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 1520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1520
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3570750"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..395)
                     /locus_tag="VLJ17_24110"
     CDS             complement(<1..395)
                     /locus_tag="VLJ17_24110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26097.1"
                     /translation="MIVALFCSSGFAVGPVFWEITKQDDVIKGDARGVSIAENGTIML
                     APAFTLVYDTKEAYIWSSTTDTAGNIFLGTGHEGRIFKVTTAGEGRLFYDAAELDVTA
                     MVTDSQGNLYAGTSPNGKIYKITPDGKESV"
     gene            complement(762..>1520)
                     /locus_tag="VLJ17_24115"
     CDS             complement(762..>1520)
                     /locus_tag="VLJ17_24115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26098.1"
                     /translation="LLTKITMFSAITATERQIGSQTLQLSGRITVNGQPDVLLDNSFT
                     SPNGAALFAVNAVSQPLAVLLGSGFNALDLKGIEVDVTSTDSRSSGTLNRLWIDKTEV
                     HRGENIEMQAFARNEDGAQFVERIPLVIPADAPVGPLVITVGDGTSLNLADRSQPTAD
                     FSPRDLGQLVRSINKLKRNNRLYVRISRAGTGAIVNNEEMPVLPPSMLATLGSSRTSG
                     GYTPLSVATLEEHELPPSQFIISGQQTITINVVK"
BASE COUNT          305 a          428 c          425 g          362 t
ORIGIN      
        1 accgactcct tgccgtcggg agtgatctta tagatcttgc cgtttggcga ggtgcccgcg
       61 tacaggttgc cttgagaatc agtcaccatt gcggtgacgt ccaactcggc agcgtcgtaa
      121 aacaaacggc cctcaccggc agtagtcacc ttgaatatgc ggccttcgtg tccggttcca
      181 aggaagatat tgcccgcagt atcggtcgtg cttgaccata tgtaagcttc ctttgtgtcg
      241 tacaccagag taaatgcggg agcgagcatg atcgttccat tctctgcgat cgacacgcct
      301 cgcgcatctc ccttgatcac atcatcctgt tttgtgattt cccagaacac cgggccgacg
      361 gcgaaccccg agctgcaaaa gagcgccaca atcattgacg ccagagccgt ctttagcggg
      421 acagttagtt tgtacatctt catcgatcct ttcatctttc gccactggtc attcttatca
      481 tgagtattcg aatctgatat ttcaaatccg ggtaatcctc tgcgcgcctc ggcgtcctct
      541 gcggtttttc tgcatcaggg tcgaggatca accgcggagg gcgctggggg cgcggaggat
      601 tggttattgt gagccagcaa ctctactatg acccgactac ctgaatgcag ggttggaagg
      661 gacgcaagaa gcatcgcgac caatacgaaa gcccgcaaga cttcgcgggc tttttctaaa
      721 cgcaagcttg atgcgctcag gcgagtaaac tctcctgcca gctatttaac cacgttgatc
      781 gtgatcgtct gctgaccgct gatgatgaac tgtgaaggcg gcagctcgtg ttcttcaagc
      841 gtcgccactg acagcggagt gtagcctcca gacgtgcggc tcgatccaag tgtggccagc
      901 atagacggag gcagcaccgg catttcttcg ttgttgacta tagctccggt gcctgcgcgg
      961 ctaatcctga cgtaaagccg gttattgcgc ttcagcttgt tgatggagcg aacaagctgg
     1021 ccgaggtcac gtggcgagaa atccgccgtc ggctgcgacc ggtcggccag gttcagcgac
     1081 gtaccgtcgc cgactgtgat aaccagcggt ccgactggcg catcggccgg tatcacaagc
     1141 gggatgcgct cgacgaactg ggcgccgtct tcgtttcgag caaacgcttg catctcgata
     1201 ttctcgccgc gatgcacttc ggtcttgtct atccataagc ggttcagcgt tccgctcgat
     1261 cggctatcgg tggatgtcac atctacctcg atgcctttca ggtcgagcgc gttgaaaccg
     1321 ctgcccagca acactgccag aggctgcgaa accgcgttta ccgcaaacag cgcggcgccg
     1381 tttggcgacg tgaaactgtt gtctagcagc acgtcgggtt gaccatttac cgtgatgcga
     1441 ccgctgagct ggagcgtctg gctcccgatc tgtctttcgg ttgcggtgat tgccgagaac
     1501 atcgtgatct tggtcagaag
//
LOCUS       DATILV010000997         3316 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4342654, whole genome shotgun sequence.
ACCESSION   DATILV010000997 DATILV010000000
VERSION     DATILV010000997.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3316)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3316)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3316
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4342654"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..262)
                     /locus_tag="VLJ17_24120"
     CDS             complement(<1..262)
                     /locus_tag="VLJ17_24120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HSV26099.1"
                     /translation="MSINLKIPDIRELKPRITVFGVGGAGGNAVNNMIAAGLQGVDFV
                     VANTDAQALTTSRAERIIQMGVQATEGLGAGSQPDVGCTAAQE"
     gene            complement(351..1673)
                     /gene="ftsA"
                     /locus_tag="VLJ17_24125"
     CDS             complement(351..1673)
                     /gene="ftsA"
                     /locus_tag="VLJ17_24125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009337115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HSV26100.1"
                     /translation="MSPLNYGLTPKMKPLAPKRTALVVALDVGTSKIACLIAKLKPQR
                     PQEVLRRRSHAIEVVGFSHTESFGMKAGNVVDLVEAEGAVRHAVDLAERSARCQVESV
                     VVSISAGRLASERLSAAIRISGAAVSDRDIGRVLAAGSRQSAREGRVVLHSVPIGFSL
                     DDAHGVRDPRGMLASTFGVNMHLVTTDAAPARNILLAVESCHLVVEAMVAGPYAASSA
                     TLADDEADLGAAVIDMGAGTTTVAVFTDGRFIHADGFTVGGRHVTLDIARGLGTSVHD
                     SERIKTLYGSVLAGGADERDMITVPTVSGEDREAPRFVSRAELTRIIKPRVEEILEMV
                     RDRLATSPFAAEPRGRVVLTGGACQLTGLSDLAGRILGRPVRIGRPLGISGLPEVARG
                     SAFAVAAGLLVYPQVAHLEHFEPRHTQQFKVGAGGYIARVGRWLRESF"
     gene            complement(1670..2671)
                     /locus_tag="VLJ17_24130"
     CDS             complement(1670..2671)
                     /locus_tag="VLJ17_24130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsQ-type POTRA domain-containing protein"
                     /protein_id="HSV26101.1"
                     /translation="MDGGGRFAGSLSKTTLSRSVRASVATVVSWRRCAERHGRDAVRV
                     VEPSGRFHRFARCLDRAANRLSRLPRHAGLVAVILMIVASTGYGAVRGDQARKIVDFF
                     KDVRDMGANVAGFNIAAVAITGERHLSREEILVAAGVTGRASLLFLDVADARARLLTN
                     PWIADATVQKLLPDRLVISISERQAFALWQKAGRVGVIAGDGTVLEPYVLRRYVDLPL
                     VVGVGAEIRAKEFLAMLDRRPELRANVRASVLVAERRWNLRLKNGVDIRLPEFDVEHA
                     LDQLAALERDTKLSSRDITAIDLRLADRITVRLSEGAFLAREEAAKKKLQKPKGGSA"
     gene            complement(2638..>3316)
                     /locus_tag="VLJ17_24135"
     CDS             complement(2638..>3316)
                     /locus_tag="VLJ17_24135"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HSV26102.1"
                     /translation="PYSHSGPLSSALAMQKGVAKVVMANAGVAVPDGIVVSRQEAAKS
                     HVLPPPYVIKPIAEGSSVGVFIVTEAHSHPPQELTRHDWAYGERLLCERYIAGKELTC
                     AVVGDKALGVIEIVPAMKFYDYEAKYAPGGSKHLLPAPLKPNVYQEVRRLALLAHQAL
                     GCRGVSRADFRYDDRMDVPQGLVCLEVNTQPGMTETSLVPELAADAGITFEELVRWMV
                     EDASLDR"
BASE COUNT          658 a         1097 c          981 g          580 t
ORIGIN      
        1 cctcctgggc ggccgtgcag ccgacatccg gctgtgagcc ggcgccaagg ccctctgtgg
       61 cctgcacacc catctgaatg atgcgttcgg cacgcgaggt ggtcaacgcc tgagcgtcgg
      121 tgttggcgac gacgaaatcg accccctgga gacccgcggc gatcatattg ttgacagcgt
      181 tgccgcccgc cccgccgacg ccgaacaccg tgatccgtgg cttgagctcg cggatgtcgg
      241 gaattttcaa attgatgctc atggctgcct cttgtgtgcg cgggcggatg caccgcagag
      301 tgtcgccggc cgagccgtgg ccgggctttg aagatcagaa ctctcgatgg ttaaaagctc
      361 tcgcgaagcc atcgtccgac ccgagcgatg tagccgcccg cccccacttt gaattgctgc
      421 gtgtgcctcg gttcgaaatg ctctagatgt gcgacctgcg gatagaccag gaggcccgcc
      481 gccaccgcga aagccgatcc acgagcgacc tccggcagcc ccgaaatacc cagcggacgg
      541 ccgatacgaa ccggccgtcc aagaatgcgg cctgcgagat cggacagtcc cgtaagctga
      601 catgcccctc cggtcagaac cactcggccg cgcggctcag cggcaaacgg ggaggttgca
      661 agacgatcgc gcaccatctc gagaatctcc tcaacgcgcg gcttgatgat gcgcgtcaac
      721 tcggcccgcg acacgaaccg cggtgcttca cggtcctccc cgctgacggt cggcacggtg
      781 atcatgtcgc gttcgtccgc tcctccggcc aatacactgc catagagcgt tttgattcgc
      841 tcggagtcgt gcacgctggt acccaaaccg cgcgcaatat cgagggttac atggcgcccg
      901 ccgaccgtga aaccgtcggc atggatgaaa cgcccatccg taaataccgc caccgtggtg
      961 gtgccggcgc ccatgtcgat gacggcggct ccaagatcgg cttcatcatc tgccaaggtc
     1021 gccgaacttg ccgcataggg accagccacc atggcttcga ccacaagatg gcagctttct
     1081 accgcaagta gtatattgcg agcgggtgca gcatcggtgg taaccagatg catgttgaca
     1141 ccgaaagtcg aggccagcat gccgcgcgga tcccgcaccc catgggcatc gtcgagcgaa
     1201 aacccgatcg ggaccgaatg cagcacgacc cggccctcgc gggcggattg acggcttcca
     1261 gccgccaaca cgcgaccaat atcccgatcg ctgaccgccg cgcccgaaat cctgatagca
     1321 gcgcttaagc gctcactggc gagccgcccg gccgatatcg agacgacgac ggattcaacc
     1381 tggcatctgg cgctgcgctc ggcgagatcg accgcatgac gcactgcccc ctcggcttcg
     1441 acgagatcga caacgttgcc ggccttcatg ccgaacgact cggtgtgact gaaaccgacc
     1501 acctcgatgg catggctgcg ccttcgcagc acctcctgag gccgttgcgg cttgagcttg
     1561 gcgatcaggc aagcgatctt gctggtaccg acgtcaagcg cgaccacaag cgcggtccgc
     1621 tttggcgcca gcggcttcat cttcggggtc agaccatagt tgagcggact catgcgctac
     1681 cgccctttgg tttctgcagc tttttcttcg ccgcttcctc gcgcgccaaa aaggcgccct
     1741 cggacagccg gacggtgatc cggtctgcca gcctgagatc gatggccgta atatcgcggc
     1801 tcgacagctt ggtgtcgcgc tccagagcgg caagttggtc caaggcgtgc tcgacatcga
     1861 actccggaag gcggatgtcg acgccgttct tcagtcttag gttccagcgc cgttcggcga
     1921 ctaataccga agcccgcacg ttggcgcgca gttcaggacg gcggtccaac atggcgagaa
     1981 attccttggc acgaatttcc gcgccgacgc cgacgaccag cggcaggtcc acatagcgtc
     2041 gcaatacgta aggctcgagc acggtgccgt cgcccgcaat gacgcccacg cggcctgcct
     2101 tctgccacaa cgcaaaggct tgacgttccg agatggaaat cacaaggcga tcgggcagca
     2161 gcttttggac cgttgcatcc gcaatccacg gattggtcag gagccgcgca cgagcatcgg
     2221 cgacatcgag aaacagcagt gaagcgcgtc ccgtgacacc ggcggcgacg agaatttcct
     2281 cgcggctcag gtgcctctcg ccggtgatcg cgaccgccgc gatattaaag ccggccacat
     2341 tggcccccat gtcgcgcacg tctttgaaaa aatcgacaat cttgcgcgct tgatcgcccc
     2401 tcaccgcgcc atagccggtg ctggccacaa tcataagaat gaccgcgacg agaccggcat
     2461 gtcgcggcag ccgcgacagg cggttggccg cgcgatcgag acagcgtgcg aaacggtgaa
     2521 accgtcccga gggctccacc acgcgcacgg catcgcggcc gtgccgctcg gcacagcggc
     2581 gccacgaaac gaccgttgca acgctggccc tgaccgaccg cgacagcgtt gtcttactca
     2641 gcgatccagc gaagcgtcct ccaccatcca tctaaccagc tcttcaaacg tgatgccggc
     2701 atcggcagca agctccggca caagcgatgt ctcagtcatg ccaggctggg tattgacctc
     2761 aaggcaaacc aaaccttgcg gcacgtccat gcggtcgtcg taacgaaaat ccgcacggct
     2821 tacccctcga cagccgagcg cctgatgcgc caacaacgcc agtcttcgga cctcttggta
     2881 aacatttggt ttaagtggtg ccggaagaag gtgttttgag ccgccgggag cgtattttgc
     2941 ttcgtagtca tagaatttca tcgccgggac gatctcgatg acacccagcg ccttgtcgcc
     3001 cacgaccgcg caggtcaatt ccttgcccgc aatgtagcgc tcgcaaagca gccgctcgcc
     3061 ataggcccaa tcgtggcggg ttagttcctg gggcgggtgg gaatgagcct cagtgacgat
     3121 gaacactccg acgctggagc cttcggcgat cggcttgatc acgtagggcg gcggcaggac
     3181 atgggacttc gccgcctcct gacgcgacac cacgatcccg tcaggcaccg ccacgccggc
     3241 atttgccatc accactttgg cgacaccctt ttgcatggca agcgccgacg aaagcgggcc
     3301 ggaatgactg taggga
//
LOCUS       DATILV010000998         4489 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_503452, whole genome shotgun sequence.
ACCESSION   DATILV010000998 DATILV010000000
VERSION     DATILV010000998.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4489)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4489)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4489
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_503452"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..525
                     /locus_tag="VLJ17_24140"
     CDS             <1..525
                     /locus_tag="VLJ17_24140"
                     /inference="COORDINATES: protein motif:HMM:NF025091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HSV26103.1"
                     /translation="VEHHVGIDNLVDIDLMVDKVKEAIVARTDPNLVIIARTNTRRVH
                     GLDDALRRGEAFHRAGADMLFIYTRDADEMRFVGERLPAPLMTFAPPDGFATFALSQS
                     DLFRLGYRVAASSGSSFAAMYKAVRQSMECLAQDRPDPFLGPGGAEAEMKRSHQTSRL
                     DAMLEVERRTMKGR"
     gene            complement(531..1283)
                     /locus_tag="VLJ17_24145"
     CDS             complement(531..1283)
                     /locus_tag="VLJ17_24145"
                     /inference="COORDINATES: protein motif:HMM:NF036686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26104.1"
                     /translation="MDAIASKCAGEDHIEVPAARIGLIIPSVNRLTEPQFTHFAPPGL
                     GIHVTRARIAGKWRKPVTELAPIIAQAAGALADSSPDLIVYHCTDSSMREGLDGERRI
                     LEIVRREAGIEAISTSALVVEALNALGIRKLVIVSPYQDNDVIIAYLQSCGFTVVHDV
                     ALRLPGHESSCAPPERWVQTTLDNARDEADGYFLSCTNTTQIEAIEELEAGLGRPVVS
                     SNQAVLWGAVKRLGGRLGSDVAMPRLGRLMTM"
     gene            1649..2416
                     /locus_tag="VLJ17_24150"
     CDS             1649..2416
                     /locus_tag="VLJ17_24150"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HSV26105.1"
                     /translation="MKRLLLGTLLGLAAGSAMAADLPVKAPLAAPIVAPEFNWNGFYI
                     GAHLGGGWEHSESSSFDSTGAFIETLGSDRSGVLGGGQIGFNWTVAPRWVVGIEADIS
                     AADLKGSTDPCTATGCAHNDLKRDLLGTVRGRLGYAWSNMLFYGTGGWAWGHSSTDRT
                     VTCVVAGGGTCPGGPSPSALTGMVSSSSGTDSGWAAGGGIEWAFARQWSAKIEYLHYQ
                     FDNIGRDFSYAGFPLASRHVNRKDTDETVRAGVNYRF"
     gene            2614..3639
                     /gene="purM"
                     /locus_tag="VLJ17_24155"
     CDS             2614..3639
                     /gene="purM"
                     /locus_tag="VLJ17_24155"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006472437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HSV26106.1"
                     /translation="MTEESRDGLTYAQAGVDIEAAGNRMVDLIKPLVRATARAGADPE
                     IGGFDGLFDLKRAGFPDPVLVAATDGVGTKVKIAIETGRHDTIGIDLVAISVNDLVVQ
                     GAEPLFFLDYFACGKLAPEVGVAVVTGVAAGCRAAGCALIGGETAEMPGPYLTGDYDL
                     AGFTVGAAERGNLLPRRDIKAGDAVLGLASSCVHSNGYSLVRKVVERARLGWDAPAPF
                     EPSRSLGEAMLTPTRIYVASCLAAHITGGGLPDNIARVLPQGLGVELDLARVGVATTG
                     GIAEPEMLRTFNCGIGMVVIMEPAAADAVTGLLERYGEQVVPFGQMVEQPAAGVVTYR
                     GQLALTG"
     gene            3643..4302
                     /gene="purN"
                     /locus_tag="VLJ17_24160"
     CDS             3643..4302
                     /gene="purN"
                     /locus_tag="VLJ17_24160"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HSV26107.1"
                     /translation="MARKRVAILISGRGANMAALIATAKEPDYPAEIALVVSNRPDAG
                     GLRRATAEGIATAVVDHARFGKDREAFERAVHALLEAHQIDIVCLAGFMRLLTPWLVS
                     RWSGRMLNIHPALLPSFTGLHTHERALEAGVKIHGATVHFVVPEVDAGPIIAQAAVPV
                     LDDDTPDTLAARVLAVERRIYPLALGLVADGKSSIAAQGTVRNAVATLPTAQLIVPDL
                     H"
     gene            4373..>4489
                     /locus_tag="VLJ17_24165"
     CDS             4373..>4489
                     /locus_tag="VLJ17_24165"
                     /inference="COORDINATES: protein motif:HMM:NF028481.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HSV26108.1"
                     /translation="MKVETLLKMAKLPYRTDTTGFAKAPKGKIPYIDDEGVVV"
BASE COUNT          794 a         1394 c         1428 g          873 t
ORIGIN      
        1 gtcgaacatc acgtcggtat cgataacctg gtcgacatcg acctcatggt cgacaaagtc
       61 aaagaagcga tcgtggcgcg caccgatccg aacctcgtca tcatcgcgcg caccaatacg
      121 cgacgcgtcc atggactgga cgatgcgctg cgccgcggcg aagcgtttca tcgcgcgggc
      181 gccgacatgc tgttcattta cacccgcgac gccgatgaga tgcgtttcgt gggcgaacgg
      241 ctgcccgcgc cgctaatgac gtttgcgccg ccggatggat ttgcgacctt cgcgctgtcg
      301 caatccgatc tgttccggtt gggctatagg gtggccgcat catccggctc gtcattcgcc
      361 gccatgtaca aagcggtgcg ccaatcgatg gaatgcctcg cgcaggacag gcccgaccca
      421 ttcctagggc cgggcggtgc tgaggccgag atgaagcgat cgcaccaaac ttcgcggctc
      481 gatgccatgc tcgaagtcga gcggcgcacc atgaagggga ggtaggcgga tcacattgtc
      541 atcagccgcc cgaggcgcgg catcgccaca tcgctgccga gccgcccacc caatcgtttc
      601 accgcacccc acaacactgc ctggttgctg ctgacgaccg gcctgccgag ccccgcctcc
      661 aactcctcga tcgcttcgat ctgggtggtg ttggtgcagc tcaggaagta gccatcggcc
      721 tcatcgcgcg cattgtcgag cgtggtttgc acccagcgct cgggcggcgc gcatgaggat
      781 tcatgaccgg gtaggcgcag cgccacatca tggaccaccg tgaagccgca ggattgcagg
      841 taggcgatga tgacgtcgtt gtcctggtag ggactgacga tgacgagctt tcggatgccg
      901 agcgcattca gggcctcgac caccagggcg ctggtggaga tggcttcgat cccggcctcg
      961 cgccgcacga tctcgagaat gcgccgttcg ccatcgaggc cctcgcgcat cgaggagtcg
     1021 gtgcagtgat agacgatgag atcggggctt gagtcggcca acgcaccggc cgcctgcgcg
     1081 atgatcgggg caagctcggt cacgggcttg cgccacttgc cggcaatccg cgcccgcgtc
     1141 acgtgaatgc ccaagccagg cggggcaaaa tgggtgaatt gcggctcagt caaccggttg
     1201 acggacggaa tgatcaggcc gatccgcgca gccggaacct cgatgtggtc ttcaccggcg
     1261 catttgctcg caatcgcatc catgaccggc tttccctttt ttgggcgcgt caaaatttta
     1321 gtgcctgcgg gggccgcggc acaatcgcga ccacgtggat tttttcgatt tccctgcttc
     1381 gacgtgccgg ccggcgcgac acgcccgact caacgcgaga tgtcgtcacg tcagatcggg
     1441 tcgttgtgac agcggccgac cttttttcca cttttccacc cgattttttc catcattcgc
     1501 gcgtgttctt gtctccaagc ggcggtctct tgtaaaaatt ttgaccatac tgtgcagatt
     1561 ctaaggcagt gttgcagaaa gatcacatcg ttcatgatgg atttcagcta taggcgggca
     1621 ggtttcatcc agctttgggg gatttgtcat gaagaggctt ttgttgggta cactgttggg
     1681 gctcgctgca ggatccgcga tggcagccga cctgccggtc aaagccccac tcgctgcgcc
     1741 aattgttgcg cccgagttca actggaatgg tttctatatt ggtgcccatc tgggaggggg
     1801 atgggagcat tccgagagca gctcattcga ttccactggc gcgttcatcg aaaccctagg
     1861 ctccgaccgg agtggtgtac tgggtggcgg ccagatcggc ttcaattgga cagttgcccc
     1921 acgttgggtt gtcggaatcg aagctgacat ttcggcagcc gacctgaagg gtagcactga
     1981 tccttgcacg gcgaccggct gcgcccataa cgatctcaaa agggacctgc tcggcacggt
     2041 ccggggacgc ctcggctatg cgtggagcaa catgctgttc tacggtacag gtggttgggc
     2101 ctggggccac agcagcactg atcgtacggt gacgtgcgtg gtggcgggtg gcggcacgtg
     2161 tccgggaggc ccgagcccca gcgcacttac cgggatggta tcaagcagct caggaaccga
     2221 tagcggctgg gcggcgggtg gcggcatcga atgggccttt gcccggcagt ggagcgccaa
     2281 aatcgaatac ctgcattatc agttcgacaa catcggacgg gacttcagct atgcggggtt
     2341 ccccctcgca tcccgtcacg tcaataggaa agacactgat gagactgtgc gggccggcgt
     2401 gaattaccgc ttctaaaccg ctcagcttcc attcacgtga tcaggccctg gctcgctgcc
     2461 ggggccttcc ttttctgcac gatagacttt cattggcgaa agcctcacct ttcgctgatg
     2521 cggggcgctt ttcggttcat cgtagtcaga gccgccggcc ccattgcgcg gcaggcgatt
     2581 cggccctacc acgcccccgc gaaaggcgtg agcatgaccg aggagagccg cgacggcctc
     2641 acctacgcgc aggcgggcgt cgatatcgag gccgccggca atcgcatggt ggacctcatc
     2701 aagccacttg tgcgcgccac tgcccgcgcg ggcgccgacc cggaaatcgg gggatttgac
     2761 ggactgttcg acttaaagcg cgccggcttt ccggatccgg tgcttgtcgc agccaccgac
     2821 ggtgtgggca ccaaggtcaa gatcgccatc gaaaccgggc ggcacgatac catcggcatc
     2881 gatctcgtcg ccatatcggt caatgatctc gtggtccagg gtgccgaacc gctgttcttt
     2941 ctcgactatt tcgcctgcgg caagcttgcc ccggaggtcg gtgtagccgt ggtgaccggc
     3001 gtcgcagccg gctgcagggc ggcaggctgc gccctcattg gcggcgagac cgccgaaatg
     3061 ccgggcccct atctgaccgg agactacgat cttgccggct tcacggtcgg tgccgcggaa
     3121 cgcggcaacc tgctgccacg tcgcgacatc aaggccggcg acgccgtact ggggttggca
     3181 tcgtcatgcg tgcattcaaa cggctattcg ctggtgcgca aggtggtgga gcgcgcccgc
     3241 cttggctggg atgcgcctgc accctttgag ccgagccggt cgctcggcga agctatgctg
     3301 acaccgaccc gcatctatgt ggcatcgtgc ctcgccgccc atatcacggg cggcggcttg
     3361 ccggacaaca ttgcgcgggt gctcccgcag ggcctcggcg tcgaactcga ccttgcgcgc
     3421 gtcggggtgg cgaccacggg cggcattgcg gaacccgaaa tgctgcgcac tttcaattgc
     3481 gggatcggca tggtcgttat catggagcca gcagcggccg acgccgtcac gggcctcttg
     3541 gagcgttatg gcgaacaggt ggtgccgttc ggccaaatgg tggagcaacc ggcggcgggc
     3601 gtcgtgacct atcgaggcca gctcgcgctg acgggctagg ccatggcgag gaagcgcgtc
     3661 gccatcctga tttccggccg cggcgccaac atggcggcgc tgatcgcgac tgccaaagag
     3721 cccgattatc cggcggaaat cgcgttggtc gtgtcaaacc gacccgatgc cggcggactg
     3781 cggcgcgcga cagccgaggg aattgccact gcggtcgtcg atcacgctcg tttcggcaaa
     3841 gatcgcgagg cgttcgagcg ggccgtgcat gcgctccttg aagcccatca gatcgacatc
     3901 gtgtgtcttg caggattcat gcgcctgttg acgccctggc tggtttcgcg gtggagcgga
     3961 cggatgctca acatccaccc tgccctgctg ccgtccttca caggacttca cacccacgag
     4021 cgcgcacttg aggcgggcgt gaagattcac ggtgcgacgg ttcacttcgt ggtgccggag
     4081 gtcgatgccg ggccgatcat cgcccaggcc gcggtaccgg tgctggacga cgacacgccg
     4141 gacacactgg cggcgcgtgt gcttgcggtc gagcgtcgca tctatccgct ggcgctcggc
     4201 ctcgtggctg acggcaaatc gagcatcgcg gcgcaaggca cagtgcgtaa cgccgtagcg
     4261 accttgccga ccgcccagtt gatcgtcccg gatctgcatt agcgagaacc tcatgatcac
     4321 cctctacaat ttcggtcctg ccttcggtct gccggacccc agccctttcg tcatgaaagt
     4381 cgagacgctg ctgaagatgg ccaagctgcc ctaccgcacc gacaccaccg gctttgccaa
     4441 ggcacccaag ggtaaaattc cctacatcga cgacgagggc gtggtggtc
//
LOCUS       DATILV010000999         3612 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2552393, whole genome shotgun sequence.
ACCESSION   DATILV010000999 DATILV010000000
VERSION     DATILV010000999.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3612
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2552393"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..566
                     /locus_tag="VLJ17_24170"
     CDS             <1..566
                     /locus_tag="VLJ17_24170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26109.1"
                     /translation="RLAADLAAAEFITANRGTKFPIFEGSATSVTLVRTAVGPNSGPG
                     LEVVRIAEDTDRQGIALVRTRTPFAPFGLGDVSASQLNFTDPVVLLRAPFRVSFSYSA
                     GDGSWSDTWQAAPQLPSVVRFLVRDATTGRTLAISSATMVHVEVPAECAEPQSPICGA
                     QQEPAVNDPNKQADTGPAARGNAARGP"
     gene            569..1561
                     /locus_tag="VLJ17_24175"
     CDS             569..1561
                     /locus_tag="VLJ17_24175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011924435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26110.1"
                     /translation="MHNPHHNARKSPSDGFIIVAVLWILAALATLASIFSIYLANTAT
                     FISLNDNAIQTEALVSAGLELTAYQVSAPKRANNLPTASTREDANFPPPPTRGDFNFR
                     LGRANVAVNFISEAARIDINATTTQLLANFFTVLGIQRQAAEQYTERIEAWTTKPRPK
                     STFVGASQDEEEGLYRAAGRSYSPRGGPFAHIEELSLVLDLPPALIERVKPFITVYSG
                     KPQIDVLDAAPEVVAAIPGITPGLLNTLSEARRTGASAQSMAGMLGVLQGVATVDGGN
                     TYRVQVRIRYDNGRQAASEVVILTGLTDKPYRVLYWRDELEGSSNLAQPPLLAR"
     gene            1740..1979
                     /locus_tag="VLJ17_24180"
     CDS             1740..1979
                     /locus_tag="VLJ17_24180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26111.1"
                     /translation="MAVIAAPNADARNGHKGKTERGKKNQDLEAKTECCTNQGNDTER
                     RDCHFKLPLWGTAPEYRIFVPSILFVHIFMRSRSF"
     gene            2038..3183
                     /locus_tag="VLJ17_24185"
     CDS             2038..3183
                     /locus_tag="VLJ17_24185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008129678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSV26112.1"
                     /translation="MPLTPPTLTKINRAPEDARPGLSDFAAGLMWPGAMAVAAHEAMA
                     SSLKQFVRYVSGAEFEAETGQPLWTTPHQLRLELGTMELRDFSTARAGVPTLICAPFA
                     LHCATVADFAPGHSVVEALCQHGVGRVHVTDWRSAGPEMQFLSIDSYLADLNVAVDEL
                     QPPVDLIGLCQGGWLALAYTARFPHKVRRLVLVGAPVDIAAGHSRLSQMAAQLPLAGF
                     EEFVRSQGGRVHGRRALHMWGSALGIAEERRILQVPPDEHSDALNDLLARFREWNDLT
                     VDLPGIYYLQVASWLYKENRLATGQFTALGRRIDLTGLHQPIFLLCARDDELVAPEQL
                     FATANRVGTPKKYIETATEPCGHLSLFLGAETIKRSWVRIAGWLGEP"
BASE COUNT          703 a         1099 c         1061 g          749 t
ORIGIN      
        1 accgccttgc tgccgaccta gctgcagccg agttcatcac ggcgaaccgc ggaaccaaat
       61 tcccgatatt cgagggctcc gcaacctccg tcacgctggt gcgtacggca gtcgggccca
      121 attcggggcc cggtctcgaa gtcgtgcgga ttgctgagga tacggaccgc caggggatcg
      181 cattggtgcg cacgagaact ccctttgcac cattcgggct tggcgacgtc tcggccagcc
      241 agctgaactt taccgatccc gttgtgttgc tccgcgcccc tttccgggtt tcattttcgt
      301 attcagccgg tgatggttcg tggtcggaca cgtggcaagc tgcaccccag cttccgtcgg
      361 tcgtcagatt tttggtccga gatgccacaa ccggccgcac tctggctatc tcaagcgcga
      421 cgatggttca tgtcgaggtg ccggccgaat gcgccgagcc gcaatctccc atttgtggcg
      481 cgcaacagga gcccgccgtc aacgatccga acaaacaggc cgataccggc ccggccgcca
      541 gaggcaatgc cgcccggggt ccatgaccat gcacaatcct catcataacg cgcgtaaatc
      601 gccttcagac ggattcataa tcgtcgctgt tctttggatc ctcgccgcat tggcaacgct
      661 ggcctcgata ttttcaattt acctcgcaaa cacggcgacg ttcatttcgc tcaacgacaa
      721 tgcaattcag accgaggccc tggtttccgc gggtctcgaa ctcacggctt atcaagtgtc
      781 agcgccgaag cgagctaaca atttgcccac ggcttcgacc cgtgaagacg ccaatttccc
      841 tccgccgccg acccgtggag atttcaattt taggctgggg cgcgccaatg tggcggtgaa
      901 ctttatctcg gaggctgccc gtatcgatat caatgcaacg acgacgcaac tgctggcgaa
      961 ttttttcacc gttcttggca tacaacgtca ggccgccgaa caatacaccg aacggattga
     1021 agcctggacc acgaaaccga gaccgaaatc gaccttcgtg ggggcctccc aggatgagga
     1081 ggaaggcctc tatcgtgcgg cgggccgcag ctattcgccg cgcggtggcc ccttcgccca
     1141 tatcgaggaa ttgtcgctgg tgctcgatct gccgcccgcg ctcattgaac gcgtcaagcc
     1201 atttattacg gtctatagcg gcaaaccgca gatcgacgtt ctggatgcgg caccggaggt
     1261 ggttgccgcc attccgggca taacgccagg cctgttgaac accctgtccg aggcgcgcag
     1321 gacaggggcg tctgcccaat ccatggcggg aatgctcggc gtcctccaag gcgtcgccac
     1381 tgtcgacgga ggtaatacat atcgggtcca ggttcgcatc cgttacgata atgggcggca
     1441 ggcagcgtcg gaggtggtga ttcttaccgg gctcacagac aagccatatc gcgtgttgta
     1501 ttggcgcgat gaactcgaag gttcgtcgaa cctggctcag ccaccgctgc tggcgcgctg
     1561 atcgtgggct ctacgcggta tctgtgcccc ttgtggaaga agctgccgtg acttgtgatg
     1621 ggccaaatcc gccgcatcgc agacgccact gaaaggacga cgatggtgcg tgcgacaacc
     1681 ccgaggaaat acccgatctg gagggtcgct gcgatcagga tcagcgtaag tatcatctca
     1741 tggccgtgat cgccgcgccc aatgccgatg cccgcaacgg ccataagggt aagaccgagc
     1801 gcgggaaaaa gaatcaggac cttgaagcga aaaccgagtg ttgcaccaat cagggaaacg
     1861 ataccgagcg tcgcgattgt catttcaaac tgcccttatg gggtaccgca ccagagtaca
     1921 ggatattcgt cccctcgatt ttattcgttc acatatttat gcgttcacgt agtttctgaa
     1981 tttttcattt cgaaccttac aaatgactga ctgcggagat cacggttagg acactgcatg
     2041 ccgcttacac cgccaacatt gacaaaaatc aatcgcgcgc ccgaagacgc gcggcccggc
     2101 ctgtcggatt tcgcggcggg cttgatgtgg ccgggtgcga tggcggtcgc cgctcacgag
     2161 gcgatggcct cctcgctcaa acaattcgtt cgctacgtgt ccggtgcgga gttcgaagcc
     2221 gaaacagggc agccgctatg gacgacgccg catcagctgc gcctcgaact cggcaccatg
     2281 gagctgcgtg atttctccac cgcccgcgcc ggcgttccga cgctgatctg cgcacccttc
     2341 gccttgcatt gcgccacggt cgcggatttt gctcccggcc acagcgtggt tgaggcgctg
     2401 tgccagcacg gtgtcggccg ggttcatgtc accgactggc gatccgccgg acccgagatg
     2461 cagtttctct ccattgacag ctatctggcc gatctcaatg tcgcggtgga tgagttgcag
     2521 ccgcccgtcg acctcatcgg cttgtgccag ggtggctggt tggcattggc ctatacggca
     2581 cggtttcccc acaaggtgcg gcgactggtg ctggtgggcg cgccggtcga tattgcggcc
     2641 gggcattccc ggctgtcgca aatggctgcg cagcttccgc ttgctggatt cgaagagttc
     2701 gtcaggtcac agggcgggcg cgtgcacggc cggcgcgcgc ttcatatgtg gggatcggcg
     2761 cttgggatcg cagaggagcg gcgcattttg caggtcccgc cggacgaaca ttcagacgcg
     2821 ctaaacgacc tgctggcccg gttccgggag tggaatgacc tcacggtcga tttgcccggc
     2881 atctattacc ttcaggtggc atcctggctg tacaaagaga accggctcgc caccgggcaa
     2941 ttcaccgcgc tcggccggcg gattgatctt accggcctgc accagccgat cttcctgctc
     3001 tgcgcccgcg acgacgaact ggtcgctccc gagcagctgt tcgcgactgc caatcgcgtc
     3061 ggcacaccca aaaaatacat cgaaaccgca acggaaccct gtgggcacct cagccttttc
     3121 cttggcgcgg aaacgatcaa gcgcagctgg gtaaggatcg cgggctggct gggcgagccg
     3181 tagaatggat gcggaaactc tgcacccggc ggaacgccgg gcatccaagc tcccctatgt
     3241 atggaaggcc ttgggctggc cgtcatttcc gtggcttccc tgtgggtagg gattttggca
     3301 gggaatttta tgaaatttcc ggccctttcg gcgcttcctg gcgtcaaatc gcgccgtact
     3361 tacaatgcgt tgcactcaac tcataaagtt tcctgacgag tcagggcgag gaattttttt
     3421 ttggtgccgg ccgggaatca atcgcctcag gcaggaaatt atccgaccca gacccgagcg
     3481 gttataatcc gttaggtggc gccgccggct tggcgcggac caagcaaggc atcctaagcg
     3541 ccggcctttc aaaatctcac ctgagatgaa tcacagcgtt cggcagcgca acttacgctg
     3601 gtcgccgtca ac
//
LOCUS       DATILV010001000         2907 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4592960, whole genome shotgun sequence.
ACCESSION   DATILV010001000 DATILV010000000
VERSION     DATILV010001000.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2907)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2907)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2907
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4592960"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1047)
                     /locus_tag="VLJ17_24190"
     CDS             complement(<1..1047)
                     /locus_tag="VLJ17_24190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26113.1"
                     /translation="MTGTRLLQGLMKWLTREEWRDRFAEVYDDHLLPACDQTDLDVEE
                     IISILGEDWFMSTVWGCAFEDFLTRDFEDGSNIVDDYLKRRGWKEGASTRAYMAALRT
                     SVMSLYEVSDIVRDTSFRARDLVRGGEPILISERSATRSLKPWDRIATRVVQVGSQTQ
                     ISGAVLLFDRDTSEELLKLLRKIAKRAEKEKQTFADLVGRGVDNPAIANGFSETAVLD
                     ALTPPITTVWLIDTIDRALGPQIPEVCNAEGDELLFCTAYYPFVAGTTTDDIRSALGR
                     CPELRQENATFWNWIGSGKPTKALGVEKHPPKSQIFITSLGDGSLVLGGVEIKNESLV
                     LSVNSRERCERGRAL"
     gene            1223..>2907
                     /locus_tag="VLJ17_24195"
     CDS             1223..>2907
                     /locus_tag="VLJ17_24195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSV26114.1"
                     /translation="MNMEPTPSDREILAGLVERVTYQNADNGFCVIRVKARGHRDLVT
                     LVGHAATISAGEWITATGDWVNDRTHGQQFKARFLKTSTPTSNEGIEKYLASGMIRGI
                     GPVYAKKLLRAFGNRVFDVIEAEPDRLQEVDGIGPVRAGRITAAWAEQKVVREIMVFL
                     HSHGVGTARAVRIYKTYGADAVQVMSENPYRLARDIRGIGFKTADAIAMKLGVDKSAM
                     IRVRAGISYALTEAMDDGHCGLPTNELVPLAEKLLEIPQDLIRTALDLELAEGTVIAD
                     HVGEIDCIFLASLYRAERAIAERLLTLAKGELPWASIDPDKAIPWIEQRINLTLAESQ
                     KAAVGLALASKVLVITGGPGVGKTTIVNAILRILSAKHVRLLLCAPTGRAARRMNEAT
                     GLEAKTIHRLLEIDPKTGGFRRNNENPLDCDLLVIDETSMVDVLLMHALLKAVPDKAA
                     LLVVGDVDQLPSVGPGQVLVDTITSGAVPVVRLIEVFRQAAKSQIIVSAHRINQGGIP
                     DLRKPDGESDFYFVEADDPETAVRRIVELVKTRIPKRFGLNPIRDVQVLCPMNR"
BASE COUNT          596 a          862 c          845 g          604 t
ORIGIN      
        1 tagcgcgcgt ccccgctcgc aacgttcccg agaatttacc gacagcacca acgactcgtt
       61 ctttatttcc acaccaccga gtacgagcga gccatcgccg agagacgtga tgaagatttg
      121 cgatttcggc ggatgcttct ccacacccaa ggctttggtc ggtttaccgg aaccgatcca
      181 attccaaaac gtcgcatttt cctgacgaag ctccggacaa cgccctaacg ccgatcgaat
      241 gtcgtcggtc gtggtgccag ccacgaacgg ataatacgcg gtgcagaaca agagctcatc
      301 accctcggcg ttacacacct cgggaatttg cggacctaaa gcgcgatcaa tagtgtcgat
      361 gagccaaacg gtagttatcg gtggggttag ggcatccaga accgcggtct cggagaaccc
      421 gttggcaatt gccgggttgt cgacgccgcg accaaccaga tcggcaaacg tttgtttctc
      481 cttctcggcg cgcttcgcga tcttgcgcaa caacttcagg agttcttccg atgtatcgcg
      541 atcgaacagc agtacggcac cgctaatctg tgtttgtgat ccaacctgca caacgcgggt
      601 cgcgatgcgg tcccacggtt tgagggaccg ggtcgccgaa cgctcactga tcaggatcgg
      661 ttcgcctccg cgcacaaggt cccgcgcgcg gaacgaggtg tcccggacga tatcgctgac
      721 ctcatagagg ctcatcactg acgttcgcaa tgcggccatg taggcccgag tggatgcgcc
      781 ttccttccag cctcggcgtt tcagatagtc atcaacgata ttgcttccgt cttcgaaatc
      841 tcgagtcaga aagtcctcga aagcacaacc ccagaccgtg ctcatgaacc agtcttcgcc
      901 gagtattgat atgatctcct ctacatcgag atcggtttgg tcgcaggcag gcagcagatg
      961 atcgtcatag acttccgcga accgatcgcg ccattcctcg cgggtcagcc atttcatcaa
     1021 tccttggagc aaacgtgtgc cggtcatatc ctgctcgcgt cgtggaatca tcggtcactg
     1081 ccgccagcct tcgcggtggt gtagtcgagc caatggacat catcggctcg acggccgggt
     1141 tctcctcggg agggtcgaat caacaggttt tctcagatag accggacttg ctgaagaggc
     1201 gccctcgcgt gcggcggttg ttatgaatat ggaacccact ccatccgatc gcgagatact
     1261 ggctggattg gtcgagcgcg tcacttatca gaacgccgac aacggctttt gtgtcatccg
     1321 ggttaaggcc cgtgggcacc gtgatctggt caccctggtt ggtcatgccg ccacgatctc
     1381 ggccggagag tggattacgg cgaccggcga ctgggtcaac gaccgcaccc atggacaaca
     1441 gttcaaggcc cggttcctca aaacatcgac gcctacatcg aacgaaggca tcgagaaata
     1501 cctcgcctcc ggaatgatcc gcggcattgg tccggtctat gccaagaagc ttctgcgcgc
     1561 cttcggcaac agggtgttcg atgtcattga ggcggaacct gaccgcctcc aggaggtgga
     1621 tggcattggc ccagtccgag ccggccgcat cacggccgcc tgggcggagc agaaggtggt
     1681 gcgcgagatc atggtgttcc tgcacagcca cggcgtcggc acggcgcgcg cggtgcgcat
     1741 ctacaagact tacggcgccg atgccgtgca ggtcatgtca gaaaatccct atcgtttggc
     1801 gcgcgatatc cgcggcatcg gcttcaagac tgccgacgct atcgcgatga agctcggcgt
     1861 cgacaagtcc gccatgatcc gcgtgcgtgc aggcatctcc tatgcgttga ccgaggcgat
     1921 ggacgacggg cactgcggcc tgcctaccaa cgaattggtg ccgcttgccg aaaagctcct
     1981 tgagataccg caggatctga tccgcacggc gctcgatctc gaactggctg agggtacggt
     2041 catcgccgac catgttggtg agattgactg cattttcctt gccagtctgt atcgcgccga
     2101 acgggctatt gccgaacggc tgttgacgct tgcgaagggc gaacttccct gggcttcgat
     2161 cgatccagac aaggccattc catggattga gcagcggatc aacctgacgc tcgccgaaag
     2221 tcaaaaagcg gcggtcgggc tggcgcttgc ttccaaggtt ctggtgatta ccggcggacc
     2281 gggggtcggc aagaccacga tcgtcaatgc gatcctgcgc attctctcgg ccaagcacgt
     2341 aaggctcctg ctgtgtgccc ccaccggccg cgcggccagg cggatgaacg aagctaccgg
     2401 gcttgaggcc aaaacgattc accgcttgct cgaaattgat ccgaagacag gtggttttcg
     2461 gaggaataac gagaatccac tcgactgcga tctgcttgtt atcgatgaaa cgtcgatggt
     2521 ggacgtgctg ctgatgcatg cgctgctcaa ggcggtgccg gataaagccg ccttgctcgt
     2581 ggtcggggat gtcgaccaac tgccttcggt tggcccgggc caagtcttgg tcgatacaat
     2641 cacttccggc gccgtaccgg tggtgcggct catcgaggtg ttccgccagg cggccaaaag
     2701 tcagatcatc gtcagcgcgc accgtatcaa ccagggcggc atccccgatc tgcgcaaacc
     2761 tgatggcgaa agcgattttt atttcgtgga ggcggacgat ccagaaactg cagtgcggcg
     2821 cattgtcgaa ttggtcaaga cgcggattcc caaacgcttt ggcctcaatc ccatccgcga
     2881 cgttcaggtg ctctgcccta tgaaccg
//
LOCUS       DATILV010001001         4120 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2809344, whole genome shotgun sequence.
ACCESSION   DATILV010001001 DATILV010000000
VERSION     DATILV010001001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4120
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2809344"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..445)
                     /locus_tag="VLJ17_24200"
     CDS             complement(<1..445)
                     /locus_tag="VLJ17_24200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26115.1"
                     /translation="MFRRGGDSDGTVGGFKMGQKERHAAGRANIKGPISGKLAIGAAL
                     AVAGILMPHQRAAADQLDTVLRRLEALEQSNAKLAKENAALRERVQRVEGAKGIATPA
                     AGAGPSGNPVQHAGVATSPAPAAPPSGGTKIAGIPVKAGPLAPIID"
     gene            862..2169
                     /gene="oxlT"
                     /locus_tag="VLJ17_24205"
     CDS             862..2169
                     /gene="oxlT"
                     /locus_tag="VLJ17_24205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015952547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxalate/formate MFS antiporter"
                     /protein_id="HSV26116.1"
                     /translation="MSVASTVGVGAQAAAVTRWTQLLSVIACMIMIANLQYGWTLFVN
                     PLREAHPTWGFDFLWWHFDTIAAIQLAFSIFIALETWLTPIEGWIVDVLGPQRGPKAM
                     VAFGGITVAIGWVINSVADSLAMLYLGAVIGGIGGGAVYATSVGHAVKWFPDRRGLAV
                     GLTAAGYGAGAALTVIPIRYVIDTSGYQAAFLWFGLFQGAVVFVLAWLLRGPAAGEIP
                     VTAAPKVQQSTRSYSPSEVLKTPVFWLLYLMFVMVSASGLMATAQIAPIAKDFGVANT
                     VIFLGGTTITVALIVDNVANGTARPLFGWISDNIGREYTMAIAFALGGISYWLLGSLG
                     TAPWAFVVFAALIFLTWGEIFSLFPSTCTDTFGPKFATVNLSMLYTAKGASAFFAPIA
                     NLIKDATGSWQMVFLVATIMNFVVVGLALFVVRPMRARMMEKT"
     gene            2331..3053
                     /locus_tag="VLJ17_24210"
     CDS             2331..3053
                     /locus_tag="VLJ17_24210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HSV26117.1"
                     /translation="MSSLPPRDRTAERAARIDIAPLEDTSTFADRAYAALKDVILALD
                     IYDRPGEIRLDERKLASDLGISRTPVREAMAQLEREGFVRSVPRRGIYVVRKTKAEVI
                     ELITAWAALESMAARLITQHASDQEIAMLRAMFATFENGRLHAKLDEYSEVNIEFHQT
                     IIRMSGNRILVDLAENLFAHMRMIRRKTIGESDRADRSIADHMNIIQAIEARDTARAE
                     ALVRDHALGLAEHVARHADYLT"
     gene            3085..>4120
                     /gene="oxc"
                     /locus_tag="VLJ17_24215"
     CDS             3085..>4120
                     /gene="oxc"
                     /locus_tag="VLJ17_24215"
                     /EC_number="4.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008949 - oxalyl-CoA decarboxylase
                     activity [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0033611 - oxalate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxalyl-CoA decarboxylase"
                     /protein_id="HSV26118.1"
                     /translation="MAEAAIRTAEPAAEAERALTDGFQLVIDALKLNGVNTIYGVPGI
                     PITDFGRMAQAAGMRVISFRHEQNAGNAAAIAGFLTKKPGICLTVSAPGFLNGLTALA
                     NATTNCFPMILISGSSEREIVDLQQGDYEEMDQMAIAKSLCKAAFRVLHAADIGIGVA
                     RAIRAAVSGRPGGVYLDLPAKLFSQVMDAEAGAKSLVKVVDPAPVQIPGSAAVKRALD
                     VLRSAKRPLIILGKGAAYAQADDDIRALVEKSGSPFLPMSMAKGLLPDTHPQSAGAAR
                     STVLKDADVVMLIGARLNWLLSHGKGKTWGAPHSKKFIQVDIEPKEMDSNVEIAAPVV
                     GDIGSCVSALL"
BASE COUNT          789 a         1243 c         1233 g          855 t
ORIGIN      
        1 tgtcgatgat cggcgccaag gggccggcct tgacgggaat gccggcaatc ttggtgccac
       61 ccgacggcgg ggccgcaggg gccggcgatg tggccacccc ggcatgttgg accgggttgc
      121 cgctgggtcc tgcgccggcc gccggcgtcg caatgccttt ggcgccctca acgcgctgca
      181 cgcgctcgcg caatgcggcg ttttcctttg ccagtttggc gttgctttgc tccagcgctt
      241 ccaggcggcg caataccgtg tcgagctgat ctgcggcggc ccgctggtgc ggcatcagta
      301 tcccggcaac cgccaatgct gccccaatgg ccaacttccc ggagattggt cctttaatat
      361 tagcgcgtcc agcggcgtgc cgctccttct gccccatctt aaatccccct acggtgccgt
      421 cgctgtcccc acctcgacga aacaccagcc cgtaggctgc ctcaaaagac gctagtcggt
      481 ctacataatt tataattagc taactatagg gcggaaccaa tgggcgctat tgcgatgctt
      541 agattaagct aataaagacc tgtcataaga tattataaat aaaacataaa ttttagatta
      601 tgcatcgcaa aatacagaag tgatgagctt gccaagcgtg ttgcgtcctt gcaacagatt
      661 tggaatttct tgtgaccata tcgttgtatg ggcacgttcg ctttcccgaa tgcgtcgaat
      721 agcgccaagc cgaagtagcc agaatggttt attgactagg ctatcggatc aggattggct
      781 tagccggatc cgttaaaata aagcctgaag cacgagctgc agcttctggg cgcaaaacaa
      841 tcagcatctg agggtggaaa aatgagcgta gctagcacag tgggagtcgg cgcgcaggcg
      901 gcggctgtca cccgatggac gcagctgctg tccgtcatcg cctgcatgat tatgatcgcc
      961 aacctgcaat atggttggac tttgttcgtc aacccgctga gagaagcgca ccccacctgg
     1021 ggctttgact ttctctggtg gcatttcgac accatcgcgg cgatccaatt ggctttcagc
     1081 atcttcatcg ccttggagac gtggcttacg ccaatcgaag ggtggatcgt cgacgtgctt
     1141 ggtccgcagc gcgggccgaa agcgatggtc gcattcggcg gcatcacggt tgcgattgga
     1201 tgggtcatca attcagtggc tgactcattg gccatgctct atctcggcgc cgtaatcggc
     1261 ggcatcggcg gcggcgcggt gtacgccacc agcgtcggtc atgcggtgaa gtggtttcct
     1321 gatcgacgcg gacttgcggt cggtctcacc gccgcgggct atggggcagg cgcagccctg
     1381 acggtcattc cgattcgcta cgtcatcgat accagtggtt atcaggccgc cttcctgtgg
     1441 tttggcctgt tccagggcgc cgtcgtgttc gtcttggctt ggctgttgcg aggccccgcc
     1501 gccggcgaga ttcccgtcac ggcagcccca aaggtgcaac agtcgacgcg gagctactcg
     1561 cccagtgagg tgctcaaaac cccggtattc tggctgctgt accttatgtt cgtcatggtc
     1621 tccgccagcg gcctgatggc aactgcgcag atcgcgccga tagccaagga tttcggagtg
     1681 gcgaatacgg tgattttcct cggcggcaca acgatcacag ttgcgctcat cgtggacaac
     1741 gtcgctaacg gcaccgcccg cccattgttt ggctggatat ccgacaatat cggtcgggaa
     1801 tacacgatgg ccatcgcgtt tgccttgggc ggaatttcct actggctgct gggatcgctg
     1861 ggcaccgctc cttgggcatt cgtggtgttt gcggcgctga tcttccttac ttggggcgag
     1921 atattcagcc tgtttccttc gacctgtacg gatacgtttg gaccgaagtt cgccaccgta
     1981 aatctcagca tgctctatac ggcgaagggc gcgtctgcat tttttgcgcc gatcgcgaac
     2041 ctgatcaagg atgccaccgg aagttggcag atggtatttc tcgtggccac gatcatgaat
     2101 tttgtggtgg tcggattggc cctgttcgtc gtacgtccaa tgcgagcgcg gatgatggag
     2161 aaaacttaag ttttctcaac gctcgatacg ggatgtgcgg cgacgatgcg ccgcacaccc
     2221 gatgcgacac cgcggccggg tggccgcggt cggcgccttg ctcagctggt ggtatactgt
     2281 attatagcag acgtcgctcg gtcttatcac ctgaatttac gtcgcgtcca atgagcagct
     2341 tgcctccacg agatcgaacg gcggaaaggg ccgcgcggat tgacattgca ccgcttgagg
     2401 atacgtcgac cttcgcggac cgcgcttatg ctgcgctcaa ggacgtcatc ctcgccctcg
     2461 acatttacga ccggcctggc gagatccggc tcgacgagcg caagctggcg agcgacctcg
     2521 gcatcagccg caccccggtc cgcgaagcca tggcgcagct cgagcgggaa ggttttgtgc
     2581 gctcggtgcc tcggcgcggc atctatgtgg tgcgcaagac caaggcggaa gtcatcgagc
     2641 tgatcacagc ttgggcggcg ctggaaagca tggcggcgcg gctgattacg cagcacgcct
     2701 cggaccaaga gattgccatg ctgcgcgcca tgttcgcgac cttcgagaac gggcgtctgc
     2761 acgccaagct cgacgaatat tccgaggtta acatcgaatt ccaccagacc atcatccgca
     2821 tgagcggcaa tcgcatccta gtcgatctgg ccgagaacct gttcgcgcat atgcggatga
     2881 tccgccgcaa gaccatcggc gaaagcgacc gcgccgaccg atccatcgcc gaccacatga
     2941 atatcattca ggcgatcgag gcgcgcgata ctgcgcgcgc cgaagctctc gttcgtgacc
     3001 acgccttagg gcttgccgaa catgtggccc ggcacgccga ttatctcacc tagaacgcgt
     3061 agcatgacat cagggaggtc tcccatggct gaagcagcga taagaacagc agagcctgca
     3121 gcagaagccg agcgggcgct gacggacggc tttcaactcg tcatcgatgc gctcaagctc
     3181 aacggcgtca acacgattta cggcgtgccc ggcatcccca tcacggactt tggccgcatg
     3241 gcgcaagccg cgggcatgcg cgtcatttcg ttccggcacg agcagaatgc cggcaacgcc
     3301 gccgccatcg cgggcttcct gacgaaaaaa cccggcatct gcctgacggt gtcggccccc
     3361 ggctttctca acggtttgac cgcgctcgcc aatgccacga ccaactgctt tccgatgatc
     3421 ctgatcagcg gctcgtccga gcgcgagatc gtcgacctgc agcagggcga ctacgaagag
     3481 atggatcaaa tggcaatcgc caagtctctc tgcaaggcgg ccttccgcgt gctgcatgcc
     3541 gcggacatcg gcatcggtgt ggcgcgtgcg atccgcgcag ctgtctccgg tcgtccgggc
     3601 ggcgtctatc tcgatttgcc ggccaaactt ttctcccagg tgatggacgc agaggctgga
     3661 gccaagtcgc tcgtcaaggt cgttgacccg gcaccggtcc agatccctgg ttcggccgcg
     3721 gtcaaacgcg cgctcgatgt gctaaggagc gccaagcgcc ccctgatcat cctcggcaaa
     3781 ggcgccgcat acgcgcaggc cgatgacgat atccgcgctc tggtcgaaaa gagcggcagc
     3841 cctttcctgc cgatgagcat ggccaagggc ctcttgccag acacgcatcc gcagtcggcg
     3901 ggtgcggcgc gctcgaccgt gctcaaagat gccgacgtcg tcatgctgat tggcgcccgc
     3961 ctgaactggc tcctgtcgca cggcaaaggc aaaacctggg gcgcgccgca ctcgaagaaa
     4021 tttatccagg tcgacatcga gcccaaggag atggactcaa acgtcgagat cgccgctccc
     4081 gtggtcggcg acatcggctc ctgcgtgtcg gcgctcctgg
//
LOCUS       DATILV010001002         3772 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_503969, whole genome shotgun sequence.
ACCESSION   DATILV010001002 DATILV010000000
VERSION     DATILV010001002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3772)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3772)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3772
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_503969"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..705)
                     /locus_tag="VLJ17_24220"
     CDS             complement(<1..705)
                     /locus_tag="VLJ17_24220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008593700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromate resistance protein ChrB
                     domain-containing protein"
                     /protein_id="HSV26119.1"
                     /translation="MPSITTISIDKLARLVGTPHCPTLIDVRTDDDYSRNPHLIPSSM
                     RRPYADPSAWVGEFAGRSAIVICQKGAKLSEGAAAWLRHAGVSADALEHGFEGWRAAG
                     LPLVTTTRMPQLDSQGRTVWVTRARPKIDRIACPWLIRRFVDPRAVFLFVAPSEVDGV
                     AERFSATPFDVEGVFWSHRGDNCTFDVMVEEFGLATEPLLRLAAIVRGADTGRMDVAP
                     QAAGLLAASLGLSRMYA"
     gene            1051..1263
                     /locus_tag="VLJ17_24225"
     CDS             1051..1263
                     /locus_tag="VLJ17_24225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26120.1"
                     /translation="MGLDGEKLFFSLYHMQLVDDSDELAALDSALDDVPESNLSEYVL
                     KKLNPYKRVIGKNLTHAQRRSPAARK"
     gene            complement(1357..1698)
                     /locus_tag="VLJ17_24230"
     CDS             complement(1357..1698)
                     /locus_tag="VLJ17_24230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004121360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26121.1"
                     /translation="MKDRPCAIVLAALEDEGWLMVTVVPVTHSPPGADVAAVEIPPET
                     ERRLGLDVERSWIVVSEANTFAWPGPDLRPRAPDRPETVAFGLLPANFFREVRARFLQ
                     SASGSVVPRTE"
     gene            complement(1789..2052)
                     /locus_tag="VLJ17_24235"
     CDS             complement(1789..2052)
                     /locus_tag="VLJ17_24235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003609655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008219 - cell death [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system
                     prevent-host-death family antitoxin"
                     /protein_id="HSV26122.1"
                     /translation="MVGVSAGDFGREVGKYQDMALTQPVIVTRNGRDRTVMISVEEYK
                     RLKRRDRIVRTAAEFSPDELDAIALAEPPAEAAAFDHEYSPPR"
     gene            2170..2781
                     /locus_tag="VLJ17_24240"
     CDS             2170..2781
                     /locus_tag="VLJ17_24240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26123.1"
                     /translation="MIASIFATFLATGRTYAVPDADLLLSLEPEALAVKMLFLVRQRR
                     EAMFHADALKNELWGDPSRGIRGYPLAHKGEIELALAEAWTWLMVQGLVLPAEGMNGN
                     NGDRRLSRRAYRMESEAEFASFKARLLPREIFHPKIADTVWRAFMRGTEIHELLPRKC
                     RHCAGGPHEVQGQPRTVPGGAACRGVLERSQRVDRSGTAVPGR"
     gene            2944..3273
                     /locus_tag="VLJ17_24245"
     CDS             2944..3273
                     /locus_tag="VLJ17_24245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26124.1"
                     /translation="MAIQIIVSFGHAHRIEGFRQGALLLQATPGIHSQLTVDSGDQTP
                     KPIGLVFDYCAICVVIDMGASAVPVHAPASSVPLVTSKIHFSSHAEAVTRTVGHLLFQ
                     ARAPPYA"
     gene            3428..>3772
                     /locus_tag="VLJ17_24250"
     CDS             3428..>3772
                     /locus_tag="VLJ17_24250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26125.1"
                     /translation="MTPNQVSEGNKYERSGDSLTRSWIAVVVVALSATIAVGIVQIGA
                     FRSAIDATRSAINAATSRTPVTTSQHESPMLIREGAHISVPEGSPLRGKLTVGSVEER
                     EIQRKLILPAVVE"
BASE COUNT          770 a         1139 c         1129 g          734 t
ORIGIN      
        1 cgcatacatg cgcgacagac cgagcgaagc ggcgagtagt ccggcggctt gcggtgctac
       61 gtccatgcgg ccagtgtcgg cgccgcgcac aatcgccgca aggcgcagga gcggttcggt
      121 cgcaaggccg aactcttcca ccatgacatc gaatgtgcag ttatcgccgc gatggctcca
      181 gaatacaccc tcgacgtcga agggcgtggc ggaaaatcgt tccgcaacgc catcgacctc
      241 ggagggggca acgaaaagga acaccgcgcg gggatccacg aagcggcgga tcagccacgg
      301 gcacgcgata cggtcgatct taggccgcgc gcgcgtcacc cagacggtgc gcccttggct
      361 gtcgagctgc ggcatcctgg tggtagtcac cagggggagg ccggccgcgc gccaaccttc
      421 aaagccgtgt tcaagcgcat ccgccgaaac gccggcatgg cgcaaccagg ccgctgcgcc
      481 ttcggagagc ttggcgccct tctggcagat cacgatggcg gagcggccgg cgaattcacc
      541 cacccatgcg gaagggtcgg catagggccg gcgcatcgaa cttgggatca ggtgtggatt
      601 gcggctgtaa tcgtcgtcgg tccgaacatc gatcaaagtg gggcaatggg gggtgccgac
      661 gaggcgagcg agcttatcga tggagatcgt ggttatcgag ggcatgttgc gtccttggcg
      721 ttgtgagcgg gacgcgattc ttcagcatgg cgcctcgtgg ggagatcgca agtccccatg
      781 aaccgaaaac taagcgctga gaccggattg tcaagcgcgg gtccgcggtg ccggttttgt
      841 tgctgacgac ctctgacacg gccgtctgat aatgcgattt gcgccccacg gtcattaagg
      901 tgtcggcccg cccaaacagc ccaaacaacc ggcaagcaac tcagcgaccg gagttggttg
      961 gcgccgcgcg tctagggata ttgcagggag attttgctcg gattagagag aggggccttt
     1021 ggccatctca ccgaactcag cggattttcc atgggccttg acggcgagaa actattcttt
     1081 tcgctgtatc atatgcaatt ggtcgacgac agcgatgaac ttgccgctct cgatagcgca
     1141 ctcgatgatg tgccagaatc caatctgtct gaatacgtct taaagaagct caatccgtac
     1201 aagcgtgtca ttgggaagaa cctgacacat gcgcagcgcc ggagccccgc cgcccgcaag
     1261 tgataaacgc catctcagcc cttccttccc taaatgcttg tacgcgacgc taccgtcatg
     1321 ccggccaaag cgtggtttga atttcaacgg catgtttcat tcggtccgcg gtacgaccga
     1381 accgctcgcc gactgtaaaa aacgcgcgcg cacttcgcga aagaaattgg ctggcagtag
     1441 accgaatgcg acggtctcgg gcctgtcagg cgcgcgcggc cgtaaatcag ggccaggcca
     1501 agcaaacgta ttggcctcac tcaccacaat ccatgagcgc tcgacatcga gcccgaggcg
     1561 gcgttccgtc tcaggaggaa tttcaactgc ggcgacgtct gctccgggcg gactatgggt
     1621 taccgggacg accgtgacca tcagccagcc ttcgtcctca agggcagcca acacgatcgc
     1681 acaagggcgg tctttcacgc cttcttcctg gccacgcaga tgctccgcgc gccacaggta
     1741 ggcgtaccgg atgacaagac ccggtacagg cgacggaaaa ggcaccgctt accgcggcgg
     1801 gctatattca tgatcgaagg cggccgcctc cgcgggcggc tcagcaagtg cgatcgcgtc
     1861 aagctcatcc ggcgagaact cggctgccgt acgcacgatc cgatcacgcc gcttcaagcg
     1921 cttgtattcc tcgaccgaga tcatgaccgt gcgatcgcgc ccgttgcgcg tcacgatgac
     1981 cggctgcgtc aaggccatgt cctgatactt gccgacctca cggccgaaat cgcctgcact
     2041 tactccgacc atctcgttta tgctcgccct tatatataag tatcattata cgcgtttcac
     2101 gcgaaaaccg caactcacgc gattcacgtg tttcactgat cttgatcatc catctcccta
     2161 taagcccttg tgatagcgtc tatttttgca acttttcttg caactggccg gacctatgct
     2221 gttcctgatg ccgatctctt actctcgctc gaacccgaag cgcttgcggt caagatgctg
     2281 ttcttggtcc gccaacggcg tgaggcgatg tttcatgcag acgcactaaa aaacgagctg
     2341 tggggtgatc ctagtcgcgg cattcgaggc tacccgctcg cgcacaaggg cgaaatagaa
     2401 cttgccctcg ccgaagcctg gacctggctc atggtgcagg gtctcgttct ccccgccgaa
     2461 ggcatgaatg gcaataacgg tgaccggcgg ctcagtcgcc gcgcctaccg catggaatcc
     2521 gaagccgaat tcgccagttt caaagcccgg ctgctgccac gcgaaatctt tcacccgaaa
     2581 atcgccgata cggtctggcg cgcctttatg cgcgggactg aaattcacga gctgctgccc
     2641 cgtaagtgca ggcattgcgc cggcggcccc cacgaagtgc aaggtcagcc acggacagtc
     2701 ccgggcgggg ccgcttgccg cggcgttttg gaacgatccc agcgggtgga tcgaagcggc
     2761 acggcggtac cgggacggta acgcccgtgt gcggcgggtg ctgtgcgcca ttgacacatg
     2821 cgatcccgcg gcgcgacaat atatagtagg gccttaaatt aattgttctt ggcttgaatg
     2881 ttcggctgaa tgcgttgggt tcgaacaaac ctgcggcggg gatcatggtg cgcgttgctc
     2941 gccatggcga tccagattat tgtgtcattt gggcacgcgc atcgcatcga gggcttccgc
     3001 caaggcgcgt tgttgcttca agcgactccg ggaattcata gtcaattaac cgtcgactcg
     3061 ggcgaccaga cgccgaagcc gatcggcttg gtgtttgatt attgtgcgat ctgtgtcgtg
     3121 atcgacatgg gcgcatccgc ggtgccagtg cacgcgccgg cgtccagcgt gcccctcgtc
     3181 accagcaaaa tacatttttc gtcccacgcc gaagccgtga cacggacggt ggggcatctt
     3241 cttttccagg cccgcgcgcc gccgtacgcc tgacatcact gattgaacgg cctttggcgt
     3301 ccccaatccg tatggcgtga cgtcgcccgc gcgacaacct cttgcaaccg ccatcgacga
     3361 tggggaaccg gcctcaaccg agcccggggc cacggcacgc gttattgtcg atttgggaat
     3421 aacccagatg acaccaaatc aagtttcaga aggcaacaaa tatgagcgat ccggggattc
     3481 actaacgcgg agctggatcg cagttgtggt ggtcgcactc tcggcaacga ttgcggtcgg
     3541 catcgtgcag atcggcgcct ttcgttccgc gatagatgca acgcgttccg cgataaatgc
     3601 tgcaacgagc cgcacccccg ttacaacatc gcagcacgag agcccgatgc tgatccgaga
     3661 gggagcgcac atcagcgttc ccgaagggtc gccgttgcgg ggcaagctca cggtcggctc
     3721 cgtcgaagaa cgggaaattc agcgcaagct gatactgccg gccgtggtgg aa
//
LOCUS       DATILV010001003         3217 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_4344158, whole genome shotgun sequence.
ACCESSION   DATILV010001003 DATILV010000000
VERSION     DATILV010001003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3217
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4344158"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            10..267
                     /locus_tag="VLJ17_24255"
                     /pseudo
     CDS             10..267
                     /locus_tag="VLJ17_24255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085034.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
     gene            532..924
                     /locus_tag="VLJ17_24260"
     CDS             532..924
                     /locus_tag="VLJ17_24260"
                     /inference="COORDINATES: protein motif:HMM:TIGR01985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phasin"
                     /protein_id="HSV26126.1"
                     /translation="MDAAQAIREMADKGTKQAKESYDTMSAATAEAANMIQNACSTAA
                     QGTMDCNAKVLEFARTNSNAAFDYASKLLGVKSPTEFLETSTEHARKQFEVLSEQTKE
                     LAELGQKAMRQATEPLKAGAAKAFRPIG"
     gene            complement(1052..1754)
                     /locus_tag="VLJ17_24265"
                     /pseudo
     CDS             complement(1052..1754)
                     /locus_tag="VLJ17_24265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014493192.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
     gene            2194..2424
                     /locus_tag="VLJ17_24270"
     CDS             2194..2424
                     /locus_tag="VLJ17_24270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015599924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26127.1"
                     /translation="MTNMPSNSATAKPETATETRQIVLKEIGAKWNKFSEQDLSSLKS
                     KDDLVTQVVAKYGLEKGQVQRDVDTLLKGRQI"
     gene            2518..2796
                     /locus_tag="VLJ17_24275"
     CDS             2518..2796
                     /locus_tag="VLJ17_24275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26128.1"
                     /translation="MSTLDYAADSQLFDYDAEAELFPTKGRKPRRSTFGYRRFSRAAD
                     AIRFAIEDLPRELLLGGYLEVNESRYDCEGIRCLYNSADYPLTRRTAA"
     gene            2803..3093
                     /locus_tag="VLJ17_24280"
     CDS             2803..3093
                     /locus_tag="VLJ17_24280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26129.1"
                     /translation="MTTRTHRKTVVFSRPFSLKGVDRILPPGDYPVVTDEELIEGLSF
                     PVYRRVSTMILVPVQSHFASSVEMVVIDPLDLQAAQDRDAQVPAPTATRRSL"
BASE COUNT          686 a         1000 c          898 g          633 t
ORIGIN      
        1 tttcctgctc tggctaccga gagcctcctc gtcattctgc tggtcggcct gatcgctgca
       61 tggctcgccg gatagatcgt ccgcggtacc ggcttcggcc tgattgccga catctgtatc
      121 ggcatcatcg gcgccgtgat cggcagttgg ccgctaccgc gcatccatct tggagccggg
      181 attgtgtccg cgatcgtccc cgccaccatc ggcgcgatcg tgcttctgct catcctccgg
      241 ctggtcaaca gacgcggccg gtggtagcgg ccaaaccggc ctgccctcgc aactaaattg
      301 gtttacacac ccaatcgctt attgcgctgc atcatttcga tcgccatatc agcgtttcag
      361 acggaccgca gacgcaatca acaaaagccg ccggcggcaa gacgggaagc ccgatcagcg
      421 tccagggcgg cgcggccgga aatcctccga taggaaacgc cccaaggatc gagtgtcatg
      481 agagaaacca acacgacgtc cggtggaacg aagcccaccg gcgccccgac gatggatgcg
      541 gcgcaggcaa ttcgcgagat ggccgacaaa gggaccaagc aagccaaaga gtcctacgac
      601 acgatgagcg ccgccaccgc ggaagcagcc aacatgatcc agaacgcctg ttcgacagcc
      661 gctcaaggta ccatggactg caacgccaag gtcctcgagt tcgctcgcac caacagcaac
      721 gccgccttcg actatgccag caagcttctc ggcgtgaagt cgccgacgga gttcctcgaa
      781 acctcgaccg aacacgcgcg caaacagttc gaagttctgt ccgagcagac caaggaactc
      841 gcggagcttg gccaaaaggc gatgcgccag gcgacggagc cgctcaaagc cggcgcggcc
      901 aaggcgtttc gccccattgg ttgaagtgcg ccgttctgac ggtagtgctc tctgatcact
      961 gcaagcccgg gtcggtcggc ccgggctttc tgttgctcga caccaagaca ttttcaggcg
     1021 ccgatgcgac aactacaggg cgccttccgc gtcagtcatg cagcacgaca ttcaacaatg
     1081 agctgtgaac gtgcaggccg ccgttgtatt cgatgaagcc cagccggcgg aacttgttca
     1141 tgaagaaact gacgcgcgaa cgagtcgtgc cgatcatctc cgcgagcgtc tcttggccga
     1201 tgctcgcaat caccggttcc ggctttccgt ccttgccgaa attcgccagc agcagaagaa
     1261 gccgcgccag acgcttttcg ctggaattga acagctgatc gaccaggtct tcttcgacgc
     1321 ggatgttccg acccaacaga tacgcgacga acatttccgc aaacgcagcc tcgccattca
     1381 gcacgcggat catggctgac tttctgaccc gtgtcacaga gcagtcagcc atggaggtga
     1441 ccgtcgccat gcgccgggtc tgaccggcca ggcacccctc gccgaaaaaa tcgcccgccc
     1501 cgagaatcgc gatcaccgct tccttgccct gcggggagaa caccgccacc ttcaccttgc
     1561 cgctctggat gtaaaaaact gcatttgcgg gatcaccctg cgagaaaaca gcgtgatttt
     1621 tttctatatt tagatacggt tttgccatcg ccgaccttgg acagaaacga tttcgcatcg
     1681 aacgatcgtt tcgaattgac ggccgcgatc ggacgtcctt ggcgacggcg cggctttgct
     1741 gatgcacgtt tcatgacaat gagccttctt cgatcgccaa gtattcgcac aattaaatct
     1801 ggcacaatga gcattttgca cagatcaccg tccaccgagc acgtatgatt caggctggat
     1861 tattcatatg catcaacttg gatgccgctc ctcgcccgct accgcgcgcc gactcttggc
     1921 gttgtgcagg ttgagggagc agcgtcctcc ggttcaccat ggcggccctg ttcgcgaacg
     1981 accgcgagca aggcccgcga attcctcctc aagctattcg catggttcaa tatttggctc
     2041 ctgtcgtcca ccaagttcgg aagtaaattg cccaggctgc aaaaatatat ttttgaaggg
     2101 acctagtttt gttgtgtttc aacattagat tcatttcgct ttgggtgatg accattcaga
     2161 cgatacttcc ctttaatttt ttggagagac ttcatgacca acatgccttc aaattcagct
     2221 accgcaaaac ccgagactgc caccgagacg aggcaaatcg tcctcaaaga gatcggtgcg
     2281 aagtggaaca agttctcgga gcaggatctc tcctcgctca agagcaagga cgatctcgtt
     2341 acccaggtcg tcgccaagta cggcctcgag aagggccagg ttcagcgcga cgtcgacacc
     2401 ctcctgaagg gtcgccagat ctgacgcgtg gtgccgtcaa aggccgaggc cgccccgtgg
     2461 cggcctcggc tacgcccgca aactaaggat ccatcgggca gaaccggaga ggcgaaaatg
     2521 tccacactcg actacgccgc cgactcgcag ttgttcgact acgacgccga agccgagctg
     2581 tttccgacaa aggggcgaaa accccgacgt tcgacgttcg ggtaccggcg attttcccgc
     2641 gccgcggatg cgatccgctt cgcgatcgag gacctgccgc gggagctgct gctgggcggc
     2701 tatctcgaag tgaacgagag ccgatatgac tgcgaaggca tccgctgctt gtacaacagc
     2761 gcggactatc cgctgacccg ccgcacggcg gcgtagcttt cgatgacgac gcggacgcac
     2821 cgcaagaccg tcgttttcag ccggcctttc agcctgaaag gcgtcgatcg gatattgccg
     2881 ccaggagatt atccggtcgt gaccgacgaa gagctgatcg agggtttgtc gttcccggtc
     2941 tatcgccgcg tgtcgacgat gatcctcgtc ccggtgcaat cccatttcgc gtcctcggtc
     3001 gagatggtgg ttatcgatcc gctcgacctc caggcagcac aggatcgcga cgcgcaggtg
     3061 cctgcgccga ctgcgacgag gcgcagctta tgactgatac gacgatcgat ctcgatcagc
     3121 atcgcggcat ggcagcgcag aaggccaccg gccttcgccg gatgttggcg gatgtcgagg
     3181 ccaacgaaaa gtccttgcgc cttcggcagg acgaact
//
LOCUS       DATILV010001004         4437 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2553306, whole genome shotgun sequence.
ACCESSION   DATILV010001004 DATILV010000000
VERSION     DATILV010001004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4437)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4437)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4437
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2553306"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(168..1130)
                     /locus_tag="VLJ17_24285"
     CDS             complement(168..1130)
                     /locus_tag="VLJ17_24285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009208394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV26130.1"
                     /translation="MKTRFCLTLAVATAMAAFSCPPCANADDLLKLTIGQRGNWDTAI
                     AHLGTRAGIFKKNGVELEMVYTSGSGETLQPIIGGAVDLGLAVGTLGAIAAYAKGAPV
                     RIIGAQATGAADYWYVKTSSPVKKLNDLTEKNTIAFSTNGSSTNSIVRAFIDEFKLKV
                     KPLATGNPSSTLTAVMTDQVDVGWASPPFGLKEIEEGKTRVVARASDATLVRGQTIRV
                     IVANTDALAKRKDAIGRFMKGYRETIAYMYGDNPQVMKDYGEFAGVSEAVAKRVRDDF
                     FPKSLVDPDEIHGLDSLMAEAVTLKFVTAPLTKDQVAELVQMQR"
     gene            complement(1222..2016)
                     /locus_tag="VLJ17_24290"
     CDS             complement(1222..2016)
                     /locus_tag="VLJ17_24290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009208393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSV26131.1"
                     /translation="MAEAGRLNLTAAPAIRATPVTVVRAAIIVSILLFWEAIAQSGLL
                     YRDVVPSLLAIGAAIIKLLSTADYYWHLWVTASEVGTGLVVGGLSGLLIGLVLGGNRV
                     LSKAFEPYLYYLGPTPKIIFFPVMIMWFGVGPGSKVAMGAISCFFPIALSTAAGMRQI
                     DKVLIRVGQSFRANAWQMAMKIYLPAMRHPIINGVRLGLGVAIIGTLLAETKLSNRGV
                     GFLIIQAYSLFDMPRMYAMLIVLFVLAIGANALVGRLGGLNSIKQR"
     gene            complement(1995..2765)
                     /locus_tag="VLJ17_24295"
     CDS             complement(1995..2765)
                     /locus_tag="VLJ17_24295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007689031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HSV26132.1"
                     /translation="MSTAAITRSRTFPLALGIGSLVIGILAMEVLIRIGAINRFIVPL
                     PSQIAMAFKRVIIEEDIVERFQLTFFEAFTAGAMITVIGVSLGLLLFRIDMLRRATET
                     WVAAMASAPTVLMYPLFLVIFGRSAWTIIMMGFVAGLPPVILKTIEGLAATRRVLIDV
                     GKSFKLTGPQLFAKILFPAALPTIFVGVRLGLIFTLINVVGVEFLINFGGLGQLINDL
                     AERYDLPGTYAAISFVILVSVCFFVLTEGIERWLRPVD"
     gene            complement(2762..3634)
                     /locus_tag="VLJ17_24300"
     CDS             complement(2762..3634)
                     /locus_tag="VLJ17_24300"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009208391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSV26133.1"
                     /translation="MASITTLPKSSAASAQASAHAGILVVDDIVKQFDTPEGPLVAVD
                     HVSLSVRPGEFLAVIGPSGCGKSTLFNVIGGLLDGYQGAVTVGGEAVRGPHPAIGMVF
                     QEESTFPWRTVIENVAFPLEIAGMSKKDRFDKAKKFIALVGLSGFERRYPAELSGGMR
                     QRVAIARTLASEPKILLMDEPFASLDEQTRLLLGDKVLQIQQDLKQTTLLITHNITEA
                     VQLADRILVMTYRPGRVKRIVEIDLPRPRSSDVVSSEAFGRYIAQIWSDLREEATRGM
                     QDEETRALHAGEGS"
     gene            complement(3787..>4437)
                     /locus_tag="VLJ17_24305"
     CDS             complement(3787..>4437)
                     /locus_tag="VLJ17_24305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007689035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSV26134.1"
                     /translation="PRALHQPSGGKSALGIEDLAQALRVAVGQRDVTLTHLPLSWQGS
                     FWHFRHPLDFIGSDGGGGVGGGPGISVGAALALKGSGRLPVGICGDGDFLMSVTALWT
                     AVHYRIPLLVVVANNRSFYNDEVHQERMAILRNRPVDNKWIGQKMLDPEIDMAGLARA
                     QGARGFGPITQHDELASALAQAVAAVEAGEVAVIDVRIEPGYGARDSGPMAHRKSV"
BASE COUNT          911 a         1380 c         1332 g          814 t
ORIGIN      
        1 cactgtcagt gacgacgcgg gtcaaggttg aaatgaatgt caccccatga gtggcggcag
       61 acatctccgc gtctgtgcga agatccgttg cgaatatcca tagcgtaatg cgggaagact
      121 tcctctcgta cgcaatcgcc attccgggaa tgcgtctatc accgggctca cctctgcatc
      181 tgcaccaact ccgccacttg atccttcgtc agcggcgccg tgacaaactt cagcgtcacg
      241 gcttccgcca ttagggagtc gagcccgtgg atttcatccg gatcgaccag cgacttcggg
      301 aagaaatcgt cgcgcacacg tttcgctacg gcttcggaga caccggcgaa ctcgccgtaa
      361 tccttcatta cctgcggatt atcgccgtac atgtaggcga tggtttcgcg atagcccttc
      421 atgaaccgtc cgatggcgtc cttgcgcttg gcaagggcat cggtgttggc gacgataacc
      481 cggatggtct ggccgcgcac tagggtcgcg tcgctcgcgc gtgccaccac gcgggtcttg
      541 ccctcctcga tctccttaag accgaatggc ggggaagccc agccgacgtc gacctggtcg
      601 gtcatgacag cggtgagcgt cgacgatggg ttgccggtcg ccaacggctt caccttcagt
      661 ttgaactcat cgatgaaggc gcgcacgatg ctgttggtgg acgagccgtt ggtcgagaat
      721 gcgatggtat ttttttcggt gagatcattg agctttttca ccggcgagga tgtcttgacg
      781 taccagtagt cggcggcgcc cgtcgcctgc gcaccgatga tgcgcaccgg cgcgcccttg
      841 gcataggccg cgatcgcgcc caacgtaccg accgcgaggc caagatcgac ggcgccgccg
      901 atgatcggtt gcagcgtctc accgctgccc gaggtgtaga ccatctcaag ctcgacacca
      961 ttcttcttga agatgccggc cctggtgccg agatgggcaa tggcggtgtc ccagttgcca
     1021 cgctgcccga tggtgagctt gaggagatcg tcggcgttgg cgcagggagg gcaggagaag
     1081 gcggccatgg cggtcgcgac ggcaagtgtg aggcagaagc gcgtcttcat gggagtcctc
     1141 cttggtaatt tttttccgtt tagctcgtgg ggtgggcacg ctgcgcctgg cccatcctac
     1201 gcgctaggtc tcttgtttgt ttcagcgttg tttgatggaa ttcagccctc ccagccggcc
     1261 gaccagggca ttggcgccga tcgccagcac aaacaagacg atcagcatgg catacatgcg
     1321 cggcatgtcg aataggctgt acgcctggat gatcaagaat ccgacgccgc ggttcgagag
     1381 cttggtctcg gccaggagcg tgccgatgat ggcgacgccg aggccgagcc gcacaccgtt
     1441 gatgatcgga tgacgcatgg cgggcaggta gattttcatt gccatttgcc aggcgttggc
     1501 gcgaaagctt tggccgaccc ggatcagcac cttgtcgatt tgacgcatgc cggcggcggt
     1561 ggagagcgcg atcgggaaga aacacgaaat tgcccccatg gcgaccttcg aacccgggcc
     1621 caccccgaac cacatgatca tgacgggaaa gaagatgatc ttcggcgtag ggcccaaata
     1681 ataaagatag ggctcgaagg ctttcgacaa cacccgattg ccgccgagca ccagcccaat
     1741 cagaagcccc gacagcccgc cgaccacaag gccagttcca acttcactcg ccgtcaccca
     1801 cagatgccag taatagtcag cagtcgacaa taacttgatg atcgcggctc cgattgcgag
     1861 cagcgatggc accacgtcgc gatagagcag accggactgc gcaatcgcct cccagaacag
     1921 gaggatggac acgatgatag cggcgcggac caccgtcacc ggtgtggcgc ggatcgcggg
     1981 cgccgcggtc aaattcagtc gaccggcctc agccatcgct cgatcccctc agtgagaacg
     2041 aaaaagcata cgctgaccag gatcacgaaa gagatcgccg cataggtgcc gggcagatcg
     2101 tagcgttccg cgagatcgtt gatgagctgg ccgagcccgc cgaaattgat caggaattcg
     2161 acgcccacca cgttgatcaa ggtgaagatc agccccagcc ggacgccgac gaagatggtc
     2221 ggcaacgccg ccgggaacag gatcttggcg aacaattgcg ggccggtcag cttgaagctt
     2281 ttgcccacat cgatcagcac gcggcgtgtt gccgctaacc cctcgatggt cttgagaatc
     2341 accggcggca ggccagccac gaatcccatc atgatgatgg tccaggcgct acggccgaag
     2401 atcaccagga acagcggata catcagcaca gtcggtgccg aggccatggc ggcgacccag
     2461 gtctcggtcg ctcggcgcaa catatcaatc cggaacagca gaaggcccaa cgaaactccg
     2521 atgacggtga tcatcgctcc ggccgtaaag gcctcaaaaa acgtcagctg gaaacgctca
     2581 acaatgtctt cctcgatgat cacgcgcttg aacgccatcg cgatctgcga gggcaggggg
     2641 acgatgaaac ggttgatcgc gccgatgcgg atcagcacct ccatggcaag gataccaatt
     2701 accagcgagc cgatcccgag tgccagcggg aaggtccgcg aacgcgtgat ggctgcggtg
     2761 ctcacgagcc ttctccggcg tggagcgcgc gggtttcctc atcctgcatg ccgcgcgtcg
     2821 cttcttcgcg aagatcgctc cagatttgcg cgatatagcg gccgaacgct tcgctcgata
     2881 ccacatcgga tgagcgcgga cgcggcaggt cgatctcgac aatgcgcttc acacggccgg
     2941 gccggtaggt catcaccagg atgcgatcgg cgagctgcac tgcttccgtg atattgtggg
     3001 tgatcaacaa cgtggtctgc ttcaaatcct gctgaatctg cagcaccttg tcgccgagca
     3061 gcagccgcgt ctgctcgtcg agcgaggcga atggctcgtc catcagcaga attttcggct
     3121 ccgatgctaa ggtgcgggcg atggcgacgc gttggcgcat gcccccggac aattcggccg
     3181 gataacgcct ttcaaagccg ctcaagccga ccaaggcgat gaacttcttg gccttgtcga
     3241 agcgatcctt cttgctcatc ccggcaattt cgagcgggaa ggcgacgttc tcgatcacgg
     3301 tgcgccacgg aaaggtcgac tcttcctgaa acaccatgcc gatcgcggga tgcgggccgc
     3361 gtacagcttc gcccccgacc gtaacggcac cctggtagcc gtcgaggagg ccgccgatga
     3421 cattgaataa cgtggacttg ccgcaacccg aggggccaat gaccgcgaga aactcgccgg
     3481 gtcgcacgct cagcgagaca tgatccaccg ccaccaacgg tccttccggc gtgtcgaact
     3541 gcttgacaat gtcgtcgact accagaattc cggcatgggc agatgcctgt gcgctcgcgg
     3601 cgcttgattt tggcaatgtc gttatgctcg ccattggttc attcggtcgt agctttcgta
     3661 aagcgaaacg tgcccacacg aaaattgcaa ccaagggcac gcttcgcttt gcccactttc
     3721 ttgccccaag accacgctgc caactcctcc cacccctctt gcgcaggggc gggggcaaga
     3781 gggtggctac accgactttc ggtgcgccat cggaccggag tcgcgggcgc cgtaacccgg
     3841 ctcaatgcgc acgtcgatca ccgcaacttc gccggcctcc accgccgcaa ccgcctgtgc
     3901 cagcgccgac gccagctcgt catgctgggt gatcggcccg aagccgcgcg cgccctgggc
     3961 gcgcgcaagt cctgccatat cgatttccgg gtcgagcatc ttttggccga tccatttgtt
     4021 gtcgacgggc cgattgcgca ggatcgccat ccgttcctgg tggacctcat cattgtagaa
     4081 cgagcgattg ttggccacca cgacgagaag aggaatgcgg tagtgcaccg cagtccacag
     4141 cgccgtgacc gacatcagaa aatcaccgtc gccgcaaatg ccgaccggca accgccccga
     4201 tcccttgaga gcaagcgccg ccccaaccga tattccgggg ccgccgccga cgccgccgcc
     4261 accatcggag ccgatgaaat cgagcggatg gcggaaatgc caaaacgaac cctgccagga
     4321 caacggcaga tgggtcagcg tgacatcgcg ctggccgaca gcaacccgca acgcctgcgc
     4381 taaatcctca atgccgagcg cgcttttgcc gccgctcggc tggtggagag cacgggg
//
LOCUS       DATILV010001005         2533 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_2810264, whole genome shotgun sequence.
ACCESSION   DATILV010001005 DATILV010000000
VERSION     DATILV010001005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2533
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2810264"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            81..1418
                     /gene="phaZ"
                     /locus_tag="VLJ17_24310"
     CDS             81..1418
                     /gene="phaZ"
                     /locus_tag="VLJ17_24310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007615999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoate depolymerase"
                     /protein_id="HSV26135.1"
                     /translation="MTIGEFGGAATLSDGGSLLGTPMYWFYELGHAALNPSRAFADAT
                     RLFFKNPINPLAHTAYGKSIAATMELFERSTRRYHRPEWGINSTTIGAEKIPVNIKSI
                     WQRPFCRLLHFERVFERPPRRPQPKLLIVAPMSGHYPTLLRGTVETFLPNHDVYITEW
                     IDARMVPLADGRFDLDSYIDYVISILRLLGGDVHVVAVCQPSVPVLAAVSLMEADNDP
                     NVPHSMVLMGGPIDTRINPNGVNKLAEQRGVNWFHNHVITKVPFPHPGVMRDVYPGFL
                     QLHGFMSMNLDRHIEAHQGLFMHLVKGDGDSAQKHREFYDEYLAVMDLAAEFYLQTVD
                     TVFIRHALPKGEMTHRGRRIDPAAIKRVALLTVEGENDDISGVGQTEAAHALCVNIPA
                     EDKVHYLQPNVGHYGVFNGSRFRAEIAPRIADFVLSHNDSRSARSWLKIAAQR"
     gene            1479..2243
                     /locus_tag="VLJ17_24315"
     CDS             1479..2243
                     /locus_tag="VLJ17_24315"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HSV26136.1"
                     /translation="MSIPLRALFYRRTSEPSEVTVDFDGEIYLVRLRRHGQARRYTLR
                     IHAASREVVLTMPPRGSIRQAREFAQKHGAWIAARLRRLPDAAPFAHGAWVPLRGLEH
                     RIDHRPGVRGAVWIEAQGSERLLCVAGGESHLPRRLLDFLKREAKRDFEAASRLAAQA
                     LGVKIKRVSVRDQSSRWGSCSSTGVLSYSWRLILAPPFVLDYLAVHEVAHLIEMNHSR
                     RFWRVVEGVYPDVGRAKAWLDAHGADLHRYGLDSRP"
     gene            2271..>2533
                     /locus_tag="VLJ17_24320"
     CDS             2271..>2533
                     /locus_tag="VLJ17_24320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSV26137.1"
                     /translation="MLRPGTFALTALLAALTAIGPLSTDMYLPSLPDIARQLHASTAE
                     TQFTISSYLIGFAFGQILYGPVSDRHGRKPVLLGAIALYCIASL"
BASE COUNT          462 a          802 c          736 g          533 t
ORIGIN      
        1 caacaactta tctctatgtt gacgctatga aggaaaaccg acagtctccc gcaccgcaac
       61 aggggccggg gactgattct atgacaatag gcgaattcgg cggggcggcg acgctctccg
      121 atggcgggtc gttgttgggc acgccgatgt actggttcta cgaactgggc cacgctgcgc
      181 ttaatccatc gcgcgctttc gccgatgcca cacggctgtt cttcaaaaat ccgatcaatc
      241 cgctcgccca caccgcctac ggcaagtcga ttgcggcgac gatggaattg ttcgagcgtt
      301 cgacacgccg ctatcaccgc cccgaatggg gcatcaactc gaccacgatc ggcgccgaaa
      361 agatcccggt aaacatcaag agtatatggc agcgtccgtt ttgccggctt ctgcactttg
      421 agcgtgtctt cgagcgtccg ccgcgccggc ctcaaccaaa actgctaatc gtagcgccga
      481 tgtcgggcca ctatccgaca ctgctgcgcg ggacggtgga aacttttctg cccaatcacg
      541 acgtgtacat cacagaatgg atcgacgcgc gcatggtgcc gctggccgac ggccgcttcg
      601 atctcgacag ctatatcgac tacgtgattt caatactacg cctgcttggc ggtgacgtgc
      661 atgtggtcgc ggtgtgtcag ccttcggtgc cggtgctcgc cgctgtatcg ttgatggagg
      721 ccgataacga tcccaacgtg ccgcactcca tggttttgat gggcgggccg attgacacac
      781 gcatcaaccc aaacggcgtc aacaagctcg cggaacagcg cggcgtcaac tggttccaca
      841 accacgtcat caccaaagtg ccattcccgc atcccggcgt gatgcgggac gtctacccgg
      901 gtttcctgca actgcatggg ttcatgagca tgaacctcga tcgtcacatc gaggcgcatc
      961 aaggtctctt catgcatctg gtcaagggcg acggcgactc tgcgcagaag catcgcgagt
     1021 tctacgacga atatctcgcg gtcatggatc tcgccgccga gttctatctg cagaccgttg
     1081 ataccgtgtt catccgtcat gcgctgccga agggcgagat gacccatcgt ggccgccgca
     1141 tcgatccggc ggcgatcaag cgtgtcgcgc tgttgactgt agaaggtgaa aacgatgata
     1201 tttccggcgt cggtcaaacc gaggccgcgc atgccttgtg cgtcaatatt ccggccgagg
     1261 acaaggtgca ctatttgcag ccgaacgtcg gccactacgg cgtgttcaac ggctcgcgtt
     1321 tccgcgccga gattgctccg cgcatcgccg atttcgtgct gtcgcacaac gacagccgtt
     1381 cggcgcgttc ctggctgaaa atcgcggccc agcgctaatc tcgcgttctc gcgcctgatt
     1441 gtggcacact gacggcccgc cctgattctg ggtcgctaat gtccatacca ctgcgcgccc
     1501 tgttctaccg ccgcaccagc gaaccgtccg aagtgacggt ggatttcgac ggcgaaattt
     1561 atctggtgcg cttgcgccgt cacgggcagg cgcgccgtta taccttgcgc attcatgccg
     1621 cgagccgcga agtggtgctg actatgccgc cgcgcggcag catcaggcag gccagagaat
     1681 tcgcgcagaa acacggcgcc tggatcgcag cgcgattgcg ccggttgccc gacgccgcgc
     1741 ctttcgccca tggcgcatgg gtgccactgc gggggctcga acaccgcatc gatcaccggc
     1801 ccggtgttcg cggtgcggtc tggatcgagg cacaagggag tgagcgtctg ctttgcgttg
     1861 ccggcggaga atcgcatctg ccgcgccgcc tgctcgattt cctcaagcgc gaggcaaagc
     1921 gcgatttcga agcggcgagc cggctcgcag cgcaagctct cggcgtcaaa atcaagcgag
     1981 tctccgtgcg cgaccagtcg agccgctggg gttcatgctc gtcgaccggt gtgctgtcct
     2041 attcgtggcg tttgattctc gcgccgccat tcgttctcga ctatcttgcc gtgcatgagg
     2101 ttgcacatct catcgagatg aatcattcgc gccggttctg gcgcgtggtc gaaggcgtct
     2161 atcctgacgt cggccgtgcc aaagcctggc tcgatgctca tggcgccgat ctgcatcgct
     2221 acggtctcga ctcgcgcccg taaaccgtat ttcgcggaaa gcatcgaccc atgctgcgtc
     2281 ccggcacttt cgcgctcaca gctctgctcg ccgcgctgac tgcgatcgga ccgctcagca
     2341 ccgacatgta tctgccatcg cttccggata tcgcgcgcca gctgcatgcg tcgaccgccg
     2401 aaacccagtt cacaatctcc tcctatttga tcggcttcgc cttcgggcaa atcctgtacg
     2461 gaccggtttc cgatcggcat ggccgcaagc cggtattgtt gggcgcgatc gcgctttatt
     2521 gcatagcgag tct
//
LOCUS       DATILV010001006        12453 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_505655, whole genome shotgun sequence.
ACCESSION   DATILV010001006 DATILV010000000
VERSION     DATILV010001006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 12453)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12453)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12453
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_505655"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            283..2352
                     /locus_tag="VLJ17_24325"
     CDS             283..2352
                     /locus_tag="VLJ17_24325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007758712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HSV26138.1"
                     /translation="MLIDNALSALTIVLDPARFAVICSGIGLGLIIGMLPGIGGLGGL
                     ALLIPFTHSMDAHTALAFLIGMWAVTATSDTIPAILFGVPGAIGSAATVLDGHPMAKR
                     GEAGRAFGASFMSSIVGGLLGAVLLAVSIPILRPFMLAIGTPELLAVCVLGLTLVASV
                     SQGNILKGLIVALFGVLLAAVGDEAQSGQLRWTFDTLFDTYLLDGVPIECIALGLFAV
                     PELIDMSIARTNTGSIQQLRGLFHEQMRGVRDVLRNWKLVLNSATLGVVLGSVPGMGA
                     AVIDWIAYGSAARMVKGASETFGKGDVRGLIAAESANCSREGGALIPTLAFGVPGAPS
                     MALLLGAFLSHGIAPGPKLLDTQLDITYTLVWSLALANVVGAGICFLAANPLARVATL
                     RAGILIPIVLAVCFIGAYQGSKSYGDLVVLVAFGLLGWTMKRYGWARAPLILGFVLGK
                     LIEKYLFISIGRYEFEWLQRPGVITIFALTAVVLLWPLCAALYRQWRPARGVAPSHAT
                     APAAAAGHSIDDIIGPGLWVVALLVFAAAFWGAAGWRLSARLMPQTAAMSGLIVIACA
                     AILVPLGKLRRQSPASRMSVEHLASRVELSAKTVFGRFFVELFWLLGFLAAVWLIGLM
                     PSIGVYVVLYMSTAGKTPWPTALIITASLWIGFYVLFVKLLHAPWPPSLLGDTLPQLR
                     EWTGRLI"
     gene            complement(2452..3342)
                     /locus_tag="VLJ17_24330"
     CDS             complement(2452..3342)
                     /locus_tag="VLJ17_24330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HSV26139.1"
                     /translation="MTTDDTVPTIPSQRTDYSAIVDRASLRLPGRARLALWPIVNLEV
                     WDIGRPMPRQVLPAPTGVPLLPDVPHWSWHEYGMRVGVWRFFDLFRQRGIKPTLAINA
                     RVCEDYVRVAEEARRQGWEFIGHAYDQMPIHKHENQKEMIYRSMDILERFTGKRPVGW
                     LGPGLTQTYETPELLAEAGVKYIGDWVYDDEPDIIRTAKGPLVTLPYTVELNDITMMV
                     VQHHESDYLLRRSIDAFDRLYAEGEHRAKIMAVAIHPYISGQPHRIKYLEAIYDYAAK
                     FDGVLHWNGEQILEWYLKAK"
     gene            3535..3993
                     /gene="ptsN"
                     /locus_tag="VLJ17_24335"
     CDS             3535..3993
                     /gene="ptsN"
                     /locus_tag="VLJ17_24335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020180601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS IIA-like nitrogen regulatory protein PtsN"
                     /protein_id="HSV26140.1"
                     /translation="MALTDLVVPQAVVPSLRVNNKKQALQELATRAAAMCGRSEREVL
                     EVLLQRERLGSTGIGSGIAIPHGKLARLERLFGIFARLERPIDFEALDGQSVDLMFLL
                     LAPEAAGADHLKALARVARLLRDTEIAKKLRESRDAEALYAVLTSASADK"
     gene            complement(4045..4308)
                     /locus_tag="VLJ17_24340"
     CDS             complement(4045..4308)
                     /locus_tag="VLJ17_24340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009026315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1150 domain-containing protein"
                     /protein_id="HSV26141.1"
                     /translation="MDKGSVAHTINISAEALAHLGDGEIAYIKTIRSEDVPAMFPQAP
                     QIAPGLQLFALHAADGTPIMVTDSREAAVANAWSNELQTLSVH"
     gene            complement(4365..4790)
                     /locus_tag="VLJ17_24345"
     CDS             complement(4365..4790)
                     /locus_tag="VLJ17_24345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20 family protein"
                     /protein_id="HSV26142.1"
                     /translation="MARVPSLSSPFLLGFDEIERALDRVAKAADGYPPYNIERMPREN
                     GRPERLRITLAVAGFARDELDVTIEESQLVIRGRQNDEQAHQYLHRGIAARQFQRTFV
                     LADGMEVLGADLKNGLLSIDLARPEPERVVKTIAITDHQ"
     gene            complement(4969..5778)
                     /locus_tag="VLJ17_24350"
     CDS             complement(4969..5778)
                     /locus_tag="VLJ17_24350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26143.1"
                     /translation="MAIDVGGGGVERRREVRALAEAVVANIDTGRAVERPFFHLEFDR
                     VFPQDIYGEMIAAMPAAGDYRPLPGRNSGNIREDGTSTRVKIDLFPEYIRHLAAEKLR
                     IWDVVGRALCSEDVQAAFVRRLAPGLERRFGKDFAGIGMYPIPVLTRDIPGYRITPHT
                     DTRWKGMTVQLYLPRDASATHIGTIFHERLPDGSLPKAMQMKFAPNTGYAFAVGDNTW
                     HSADPVGTEVETRDSILLTYFVDAGLLRILRNRGKRVGNFLLSEVKHLARR"
     gene            complement(5921..8947)
                     /locus_tag="VLJ17_24355"
     CDS             complement(5921..8947)
                     /locus_tag="VLJ17_24355"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HSV26144.1"
                     /translation="MSVTIVTWFAVDLQNRYEGALEDGSRTARRYAGVLAEHTARTFE
                     GVERALNEAEQIRRLYDSGLLGTANDAHDALRRVKQTSPVISAIGWTNAEGDLLVHTY
                     DGAPPRPNISDLSYFSVHRDSQDSGLIIASPFLSIASGNWITSVSRRIATPDGSFAGI
                     FSVVLDLSYFSSTFRSIVGSSGGAALLIHRRGEILIREPHVASLVGKSFQNSPLLSTR
                     LPKSNSGSYESVNVIDDVPRIIGYAAVENIPLVALINYPRAEILAPWYRSLYIYGSVT
                     ALQLVVILVGAAVLARRTNALVEAKNSVEDANARLVLATSNMNHGLAVFDADSRLVMC
                     NEKYASIFGLTLDQLKPGISLQEIFDLRLQQGIFAGGYPFSYLSDRIFYLDHPGARIF
                     ELKDGRSILMEHISIAGGGWVATHADITERRRLERQASEQANRLRQHEEDLRIQNMTF
                     KAALENMTEGLSMFDADERLLVWNDQFGSMYNLPAELLKVGTLHDDIVAYRLRAGVSV
                     GENTDVAIAQRIQDLKLVQRDIPTHRIEELTDGRLIHITRQPLELGGWVATHKDVTDR
                     HRHEARISFMAHHDLLTGLANRVFFTEKIEEAVARLRRHDEPFAIFMLDLDKFKNVND
                     TLGHPAGDQLLRETAQRLKSALRETDILARLGGDEFAIIQLAQEKHRESAASLARRIV
                     SIISEPYDLGGNTAFVGASIGIALAPDDADESTELLRMADLALYAAKSAGRNDFRFFD
                     ESMMAETDNRRTLEDELRFAIQRGGEFELRYQPVIDVKSRRPVGFEAQVSWRNPVRGL
                     IPPDELIPLAEETGLIVPLGAWVLQQACADAAKWPPHLKVAVNLSPLQLGQPDLLQIV
                     LCALTEASLTPKRIELEITETALFKSEIDYVTLIRKLKNLGISIALDDFGTGHSSLSY
                     LTMFPFDRIKIDQSFIRNLTRRADCAAIVSAVLALGRNLSTETVALGVETEQHFGILR
                     ASGVTYVQGPLFGAPCGAAELALDEAPSAALAESAA"
     gene            9352..9606
                     /locus_tag="VLJ17_24360"
     CDS             9352..9606
                     /locus_tag="VLJ17_24360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002719104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HSV26145.1"
                     /translation="MEEISQNRRDAGRHRVLKGAYISFNGLSATIDCTVRNLSDQGAC
                     LKVESPIGIPDTFDLVLDKASVYHCRVTWRKATQIGVNFT"
     gene            complement(9669..10442)
                     /locus_tag="VLJ17_24365"
     CDS             complement(9669..10442)
                     /locus_tag="VLJ17_24365"
                     /inference="COORDINATES: protein motif:HMM:NF020918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phasin family protein"
                     /protein_id="HSV26146.1"
                     /translation="MDQPQAVKPAGVSRPTRRSLTEFALQETGLVEELPAATPALPAP
                     QAAATAQRSQSSPSSDRERHHAVHAPPNQHLDTDATGSTHKSAPEPAEAEDALLHQLE
                     DMTSAATTMAKDYRFLMLEHMKINMTAALGYMSGLAVANSRITSAAHSASTQETSQHP
                     HSAEEPVPTDDKTVQEYRVKALELMTANMNTTLEYAQRLAHVKTPTEFIELATNQARK
                     QFDLMVQTGELGSIAQRLAPHDIASMTSSFTKLFCEPEE"
     gene            complement(10390..11073)
                     /locus_tag="VLJ17_24370"
     CDS             complement(10390..11073)
                     /locus_tag="VLJ17_24370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011090916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HSV26147.1"
                     /translation="MYAIVLATQKGGSGKSTLAIGLAVAAMDAGEQVGVIDADPQGTI
                     SNWSRRRANPKPRIERAGSGAAIERALIDLQRAGCTVAIIDTAATANAVSTEAIGVAD
                     LCLIPARPSPADIEAALPTLGTVRKLDKRLAFVLNQTPARSNRASEAATALNSAGVLA
                     LPYIVQRNDHQDALGAGLGVTEYDSRGQAAEEVRGLWGWVRQSLMMESIDHGPTASSE
                     AGRRFAANT"
     gene            11588..12265
                     /locus_tag="VLJ17_24375"
     CDS             11588..12265
                     /locus_tag="VLJ17_24375"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV26148.1"
                     /translation="MHNRLTNANTSANVPTVRVAVIDDHPLFRAGTVHALAKTDGLEV
                     VGEGATAADALKIARELSPNVILLDLRLPGGGVEAITNITHDCPNVRILVLTASENEQ
                     DVTSTLQAGARGYILKGSGGGEVVKTVQAIAKGDTYVAPSLAAQLLIKGPQIKAIVKK
                     TARDLTCREEEIFGCVSRGMSNKEIAKSLNCTERTIKHHMTNIMQKLNVRNRVEAALK
                     SVRLLHA"
BASE COUNT         2403 a         3619 c         3651 g         2780 t
ORIGIN      
        1 gaccaccacc gtgccgtaaa ggcgggcctt gtaatcaagc tgccgccgaa attggaagaa
       61 accgccgccc gcagcagagc tctctcaatc gggctttcaa atgcatactt caaattgctt
      121 ggcctgccat ccttattcca atcgtgctag cgcaggggag gggcggagct gcaagcctcc
      181 ccactatccc gatcacaagg gatgacacac cgatggacga gccctggcga taccatgcgg
      241 aatacgcaat aaactctttt cagcatacga cggaacgcgc ccttgctgat cgataacgcg
      301 ctcagcgccc tcaccattgt gttagacccg gcgcgtttcg ccgtcatctg ctccggcatc
      361 gggctcgggc tgatcattgg tatgctgccg gggattggcg gccttggcgg cttggcctta
      421 ctaatcccgt tcacccattc catggacgcc catacggcgc tcgctttctt gatcggcatg
      481 tgggccgtga cagcgacgtc cgacacgatt ccggccatcc tgttcggcgt gccgggtgca
      541 attggatcgg cagcaacggt gctcgacggc catcctatgg ctaagcgggg cgaggccggg
      601 cgagcgttcg gggcatcctt catgtcttcg atcgtgggcg gtctgctcgg cgctgtcctg
      661 ttggcggtct cgattccgat tttacggccc ttcatgctgg cgatcggcac gcccgaacta
      721 ctggccgtgt gcgtgctcgg cctcaccctc gtcgcctcgg tgagccaagg caacattctc
      781 aaagggctga tcgttgccct gtttggcgta ttgctcgctg cggtcggcga cgaagcccag
      841 tccggccagt tgcgctggac cttcgatacc ctgttcgaca cctacctcct ggacggagtg
      901 ccgatcgaat gcatagcgct cggcctattc gcggttccgg aactcattga catgtcgatc
      961 gcccgcacca atacgggatc gatacagcag ctccgcgggc tcttccacga gcagatgcgg
     1021 ggcgtacgcg acgtgctgcg gaactggaag ctcgtactta attccgcgac gctcggagtc
     1081 gtgctcggtt cggtgcccgg catgggggcg gccgtgatcg actggatcgc ctacggctcg
     1141 gcagcgcgca tggttaaagg tgcctcagag acctttggta agggcgacgt gcgcggcctg
     1201 attgcggctg agtccgccaa ctgctctcgt gagggcggtg cgttgatacc gacgcttgct
     1261 ttcggagtac ccggtgcgcc ttcgatggcg cttctgctcg gcgcttttct ctcccatggc
     1321 attgcgccgg gcccaaagct gctcgatacc cagctcgata ttacctacac tttggtttgg
     1381 agtctcgcgc tcgcaaacgt ggtgggcgcc ggtatctgct tccttgccgc caatcccctt
     1441 gcccgggttg cgaccttgcg ggctggcatc ttaatcccaa tcgtgctggc ggtctgcttc
     1501 atcggtgcct atcagggctc aaagagctat ggcgatctcg ttgtgctggt agcgttcggc
     1561 ttgctgggct ggacgatgaa acgatatggc tgggcgcgcg cgccgttgat cctcggcttt
     1621 gttctgggca agctgatcga gaaatatctc ttcatttcga taggacgtta tgagttcgaa
     1681 tggctgcagc ggccgggggt aatcacgatc tttgccctga cggccgtggt gctgctgtgg
     1741 ccgctgtgtg ccgccctcta ccgtcaatgg aggcctgcgc gtggcgttgc accatcccac
     1801 gccacggcgc cagccgcagc ggcggggcat tcgatagacg acatcatcgg ccctggctta
     1861 tgggtagttg cgttgctggt ctttgcggcg gcgttctggg gtgcagccgg ctggcgcctt
     1921 tcggcgcggc tgatgccgca gaccgcggca atgtccggtc tcattgtcat cgcctgcgcc
     1981 gcgattttgg taccgctagg caagctgcgg cgccagtcgc ctgccagcag gatgtccgta
     2041 gagcatctgg cctcgcgtgt ggagttgagc gccaagacgg tctttgggcg ctttttcgtt
     2101 gagctgtttt ggctcctcgg gttcctggcc gcagtttggc tcatcggcct gatgccttcc
     2161 atcggcgtct acgtggtcct ttacatgtca actgccggca agactccatg gccgacggcg
     2221 cttatcatta cggcctcact gtggattgga ttttatgttc tgttcgtcaa gcttctccat
     2281 gcgccgtggc cgccatcgct ccttggcgac acgcttccgc aactgcgcga gtggactggg
     2341 cggttgattt gacgggcgcg ttcttcgcgc gctgtgccca tctaggcacc cggtcggcag
     2401 gtggatcatt gggccaaagg ccggcccatt ggtgtccatc cttggaagca ttcatttcgc
     2461 tttcaggtac cactccaaaa tctgttcgcc attccagtgc agcacgccgt cgaatttcgc
     2521 ggcataatcg taaatcgctt cgagatattt gatccggtgc ggctggccgc tgatgtaggg
     2581 atggatcgcc accgccatga tcttggcgcg atgttcgcct tccgcataga gccggtcgaa
     2641 cgcgtcgatt gaacgtctca gcagataatc gctctcgtga tgctgcacga ccatcatggt
     2701 gatgtcgttg agttcaaccg tgtagggtaa cgtcaccagc ggccctttgg cggtgcgaat
     2761 gatgtcgggc tcgtcgtcat atacccagtc accgatgtac tttacaccgg cctcggcgag
     2821 caattctggt gtctcataag tttgcgtcag cccggggccg agccagccaa ctgggcgttt
     2881 gccggtaaag cgctcgagga tgtccatcga gcggtagatc atttctttct gattttcgtg
     2941 cttgtgaatc ggcatttggt cgtaggcgtg gcctatgaac tcccagccct gccgtcgtgc
     3001 ctcctcggcg acccgcacat agtcctcgca aacgcgcgca ttgatggcga gtgtcggttt
     3061 gatgccgcgc tgccggaaca ggtcgaagaa tcgccacacg ccgacccgca tgccgtattc
     3121 gtgccaactc caatgcggca cgtccggcaa aagcggcaca ccggtcgggg ccggcagtac
     3181 ttggcgcggc atcggccgac cgatgtccca cacctccaga ttcacaatcg gccacagcgc
     3241 gaggcgcgca cgcccgggta gccgcagcga tgccctgtcc actatggcag aatagtcggt
     3301 gcgctggctt ggtatcgtcg gcaccgtatc gtcggtcgtc atggcagcct cggatcggtc
     3361 acatcttgcc gccaaactgg gcacgcgacg gcagaagcgt catatagtac cctggtcatg
     3421 gcatcggcat tgtaaggatg caatcgtgct attgacgcgc tttgggcccg tccctatgtt
     3481 ccgcccccca attgggcccc tgtgtgtcag gcgcccccgt tttggacgat ctttatggcg
     3541 cttaccgatc ttgtggtgcc gcaggcggtc gttccctcgc tcagggtcaa caacaagaaa
     3601 caagcgctgc aggaacttgc cacccgcgcg gctgcaatgt gtgggcgcag cgaacgcgaa
     3661 gtgctggagg tgttgctgca gcgcgagcgg cttggctcca ccggcatcgg cagcggcatt
     3721 gcgattccgc atggcaagct cgccagactt gagcgcctgt tcgggatctt cgcgcgcctg
     3781 gagcgaccga tcgattttga ggcgttggac ggccaatccg tcgacctcat gttcctgttg
     3841 ctggcccctg aggctgccgg cgctgatcac cttaaggcac tcgcacgggt tgctaggttg
     3901 ttgcgggata ccgaaattgc aaaaaagcta cgcgaatcgc gagatgctga agcgctctac
     3961 gcggtgttga catccgcgtc ggcagacaaa tagtgcgtca tttgatcgcg acggttgaag
     4021 accttccagc acctgcgcct ggtttcaatg tacgctcaag gtttgcaatt cgttgctcca
     4081 ggcattggca accgccgctt cgcgcgaatc cgtaaccatg atcggcgtac cgtcagcggc
     4141 atgaagcgca aatagttgca atcccggcgc gatttgcggc gcctgtggaa acatcgccgg
     4201 cacatcctcg gagcggatgg tcttgatata ggcaatctct ccatcaccca gatgcgcgag
     4261 cgcttccgcg gagatattga tcgtgtgggc aactgatccc ttatccatga tgctcaactc
     4321 ctcgacgttt atgcactggt cgagttcctg cgcggttccc attattattg gtgatcagtg
     4381 attgcgatcg tcttaaccac ccgctcgggt tccggacgtg cgaggtcaat agatagcaac
     4441 ccattcttta gatcggcacc caatacctcc attccgtcgg ccagcacgaa cgtgcgctgg
     4501 aattgacggg cggcgattcc gcggtgaaga tattggtggg cctgctcatc gttctgtcga
     4561 ccgcggatca ccagttgact ttcctcgatc gttacgtcga gttcgtcgcg ggcaaacccc
     4621 gcaaccgcca gggtgatgcg caatcgttcc ggccggccgt tttcgcgggg catccgctca
     4681 atattgtacg gcggatatcc gtcggccgcc ttggcaacgc gatcgagcgc acgttcgatc
     4741 tcgtcgaagc caagcaggaa tgggctcgat aacgatggta ctcgcgccat gatctcaaag
     4801 tcctgcgaaa gcgactttgt ggggcccttg cggcaccccc gcctttcgga ggtcctcttc
     4861 tctaggacat cctccgttgg gcttgcgcgt aatatgggca gctccggtta agcgttcaag
     4921 gaggtgtagc agccattccg aggcgagagg gcatgcatct gcaatccttc accggcgcgc
     4981 caggtgcttc acttcgctca gcaggaaatt gccgacccgt ttgccccgat tgcgcaggat
     5041 cctaagaagt cccgcgtcga cgaaataagt gagcaggatg ctgtcgcggg tttcgacctc
     5101 ggtgccgacc ggatcggcgg aatgccaagt attgtcgccg accgcaaacg catagccggt
     5161 gttaggtgca aatttcattt gcatcgcctt aggtagcgat ccgtccggca aacgttcatg
     5221 gaagatggta ccgatgtggg tcgcggaggc gtcacgcggc agataaagct gcaccgtcat
     5281 ccccttccat cgggtgtcgg tgtgcggggt gatgcgataa cccggaatgt cgcgggtcag
     5341 caccggaatc ggatacatcc cgatgccagc aaagtccttg ccgaaacgtc gttccagtcc
     5401 cggcgcgagg cgccgcacaa acgcagcctg cacgtcttca gagcatagtg cccgaccgac
     5461 gacgtcccag atgcgtagct tctcggcggc gagatgacgg atgtattcgg gaaacaggtc
     5521 gatcttcacc cgggtcgaag tgccgtcttc gcggatatta ccactgttgc gacccggcaa
     5581 cggacgatag tcgcctgctg ccggcatcgc ggcgatcatt tcgccgtaga tgtcttgcgg
     5641 aaacacccgg tcgaactcga gatgaaaaaa aggcctttcg accgcgcgcc cggtatcgat
     5701 gttggcgacc acggcctccg ccaaggccct tacttcacga cgccgttcca ctccaccccc
     5761 gcctacatcg attgccacga cattgaccgc actaatcatt gttggccgtt atcgagtgat
     5821 cctcacctgt ccttacatga ccaatacatc aacgtccacc ggtgatccag tgttgcggtg
     5881 gacttggcgg gtcgacgtcc gccgccgtcg atttcgccgg ttaggcggcg ctctccgcca
     5941 acgccgcgct aggggcttca tccagcgcga gttccgctgc cccacatggg gcgccaaaca
     6001 gcggtccctg tacatatgtc acgcccgacg cgcgcaaaat cccgaaatgc tgctcggttt
     6061 cgactcccaa cgctacggtt tcagtgctga gattgcgacc aagtgcaaga acggccgaaa
     6121 cgatcgcggc gcaatcggct cgccttgtca aatttcgtat aaatgattga tcaatcttaa
     6181 tcctgtcgaa cggaaacatc gtcaggtaac ttagcgatga gtgaccggtt ccaaagtcgt
     6241 cgagagcaat cgagatgccg agatttttca gtttgcgtat caatgtcacg tagtcaattt
     6301 cgctcttgaa cagcgcggtc tcggtaatct ccaattctat ccgtttcggc gtgagggatg
     6361 cttccgtaag cgcgcacaat acgatctgga gcaggtcggg ctgccccaat tgcagtggcg
     6421 acagattgac ggccaccttc aagtggggtg gccatttcgc ggcgtccgcg caggcttgtt
     6481 gaagaaccca cgccccgagg ggcacgatca atcccgtttc ttcggccagt ggaatgagct
     6541 cgtcgggcgg gatgagaccg cgaacgggat tgcgccaact cacctgggct tcgaaaccca
     6601 ccggccgtcg ggatttgacg tcgatcaccg gctgatagcg caactcgaat tcgccgccgc
     6661 gttgtatggc gaagcgaagt tcgtcctcca acgtacggcg attgtccgtt tccgccatca
     6721 tcgattcatc aaagaagcgg aaatcgtttc gtcctgccga tttggccgcg taaagtgcca
     6781 ggtcggccat tctcagcagt tccgtgcttt catccgcatc gtcgggcgcc aaagcgatac
     6841 cgatactggc gccgacgaag gccgtgtttc caccaaggtc atagggctcc gatatgatgc
     6901 tcacgattcg gcgggctaag cttgcggcgc tttcgcgatg tttctcttga gccaactgaa
     6961 taattgcgaa ttcatcgcca cccaggcggg cgagaatgtc ggtttcacgc agcgcggact
     7021 tcaaacgctg cgccgtctct cgcagcaatt ggtctccggc cgggtgcccg agcgtatcat
     7081 tgacgttttt gaacttgtcg aggtcgagca tgaaaattgc gaagggctcg tcgtgccggc
     7141 gtaggcgcgc cacggcctcc tcgatctttt cggtgaagaa gacgcgattt gccagaccgg
     7201 tcaacaagtc gtggtgcgcc atgaaggaga ttcgtgcctc gtgacgatga cggtccgtca
     7261 catccttgtg cgtcgccacc caaccgccca gctcaagcgg ctgccgggtg atatgtatca
     7321 gacgtccgtc ggtcagttcc tcgatgcggt gagtcgggat gtctcgctgc accaacttta
     7381 agtcctggat cctttgcgcg atggcgacat cggtgttttc gccgactgac actccagccc
     7441 tgaggcgata cgccacaatg tcgtcatgca gcgtccccac cttcaacagc tccgccggca
     7501 aattatacat gctgccaaac tggtcgttcc acaccagcag cctctcgtcg gcatcaaaca
     7561 tgctcagtcc ttcggtcata ttttcgagcg cggccttgaa cgtcatattc tgaatgcgaa
     7621 ggtcctcttc atgctgccgc agccgattgg cttgctcgga cgcctggcgt tccaagcgtc
     7681 gacgctcggt gatatccgcg tgcgttgcga cccatccgcc cccggcgatg gagatatgct
     7741 ccatcagtat ggatcgaccg tccttgagtt cgaagatccg cgcccctggg tggtccaaat
     7801 agaagattcg atcggataga tagctaaatg gatacccccc ggcaaagatt ccctgctgga
     7861 gccgaaggtc gaagatttct tgtagcgaga tgcctggctt caattgatcg agcgtgaggc
     7921 cgaagatgct tgcgtacttt tcattgcaca tcaccaatcg gctatcggca tcaaacaccg
     7981 cgagcccgtg attcatgttg gatgtggcaa ggactaagcg ggcatttgca tcttcgacgc
     8041 tgttcttggc ttcgacaagc gcgttggtgc gacgtgcgag tacagcggcg ccgaccagga
     8101 tgaccacgag ctgtaacgcc gtgaccgagc catagatgta caggctccgg taccatggcg
     8161 cgagaatctc tgcgcgcgga tagttgatca gcgcaacgag gggtatgttc tcaaccgcgg
     8221 cgtatccgat aatgcgtggc acatcgtcga tcacattgac ggattcatat gatcccgaat
     8281 tcgatttcgg caagcgcgta ctgagcaacg gactattttg gaacgactta ccaacgaggc
     8341 tggcgacatg cggctcgcga atcaaaattt cgccgcggcg gtggatcagc agcgccgcac
     8401 cgccgctgct gccgacgatg gatcggaagg tgctcgaaaa gtaggacaga tcgagcacga
     8461 cactgaagat tcccgcgaaa ctgccgtccg gggttgctat tcgtcgggac accgaagtga
     8521 tccagttgcc ggaggcgatg gacaggaacg gcgacgcgat gatcaacccg ctatcttggc
     8581 tgtcgcggtg aaccgagaag tacgacaaat cgctgatatt ggggcgcgga ggagcaccgt
     8641 catatgtatg gaccagcagg tctccttcgg cattggtcca gccaattgcg cttatgacgg
     8701 gggatgtctg cttgactctt cgcaacgcgt catgagcatc gttggcagtg cccaataaac
     8761 ccgaatcgta caatctgcga atttgttcgg cttcgttcag ggcgcgctcc acgccctcaa
     8821 aggtgcgcgc cgtatgctct gccaaaacgc cagcataccg tcgtgcggtc cggctcccat
     8881 cttcgagcgc accctcgtac cgattctgca ggtccaccgc gaaccaggtg acgatcgtga
     8941 cgctcaagaa caagaccgcc gcacccagag agcaacttgg gcaatcgcgt aatttaccaa
     9001 agttgctgca caggaatgtg cacacccgga gttggctcaa cttggtaaac atcgaaataa
     9061 tccggtcagt cgacagcttt gcatcaaacc tacccgaata gcgtcaccga tcggtgaaga
     9121 cgaacaatgc gtcggctgga aatgtcagcc tgctccgcgg aatacttcac cgtcaatcaa
     9181 ggcttagatg tcatttcagc ccggaaaggc attttcggat gtaatacctc atgaaaacag
     9241 cgccataaaa cttcaactca tttttaagat tgagatgatt tcatggacgc ggttcaccct
     9301 gtgtagggtc gtcagccggt agatgcgatc ttggagccgg agaacaggac gatggaagag
     9361 atcagccaaa atcgtagaga cgccgggcgt caccgcgtat tgaaaggtgc gtacatcagc
     9421 ttcaacgggc tcagcgcaac gatcgattgt acagtgcgca acctttcaga ccagggcgcg
     9481 tgccttaaag tggagagccc cattggaatt ccggacacct ttgatctcgt tctcgacaag
     9541 gcgtctgtgt atcattgtcg cgtgacttgg cggaaagcca cgcagattgg cgtcaatttc
     9601 acctgacgac attttttcag ctctagcgca gacctgttaa cgtgccgtac gctggctcat
     9661 gatgccggtc attcctccgg ttcacagaac agtttcgtga agctgctcgt cattgaggcg
     9721 atgtcgtgcg gtgctagtcg ttgcgcaatt gacccgagtt cgccggtttg caccatcaaa
     9781 tcaaactgct tgcgggcctg gtttgtcgcc aattcgataa attcggtcgg tgtcttcacg
     9841 tgagcgagcc gctgggcgta ttccaacgtc gtattcatgt tggcagtcat gagttcgagg
     9901 gccttgacac gatactcctg caccgttttg tcatcggtcg gcaccggttc ttcggcgctg
     9961 tggggatgct gacttgtttc ttgcgtcgag gcggagtgag cggccgaggt gatccgtgag
    10021 tttgcgaccg cgaggccgct catgtaacct agagcggccg tcatgttgat cttcatatgt
    10081 tccaacatca agaatcgata gtccttggcc atcgtggtgg ctgccgaagt catgtcctcg
    10141 agttggtgta acagcgcatc ctcggcctct gcgggttcgg gggcactctt gtgcgtcgat
    10201 ccggttgcgt cggtatcaag atgttggttc gggggggcgt gcacggcgtg gtgccgttcg
    10261 cggtcgctag agggtgacga ttgggaacgc tgcgcggtgg cagcggcctg cggcgccggc
    10321 agcgcagggg tggcagccgg cagctcctca accaggccgg tttcctggag agcgaactct
    10381 gtcagcgatc tacgtgttgg ccgcgaaacg ccggccggct tcactgcttg cggttggtcc
    10441 atgatcaatt gattccatca ttagcgattg tcgaacccac ccccagagtc cgcggacttc
    10501 ttccgcagcc tgcccgcggg aatcgtattc ggtgacaccc aatccagctc cgagcgcatc
    10561 ttggtggtcg tttcgctgga cgatgtaagg tagtgcaagt accccggccg aattgagtgc
    10621 agttgccgcc tcgctagcgc ggttgctgcg cgctggtgtc tggttgagga caaacgcgag
    10681 tcgcttatcg agcttgcgca cggtgccgag cgtcggcaga gcagcctcga tatcggccgg
    10741 gcttgggcga gccggaatga ggcacaggtc ggcgaccccg atcgcctcgg tgctcacagc
    10801 attggctgtt gccgctgtgt cgatgatggc caccgtacat ccggcccttt gaagatcgat
    10861 gagggcgcgc tcgattgccg cgccgctgcc agcgcgctcg atacggggtt tgggattggc
    10921 gcgccggcgg ctccaattcg aaatcgtccc ctgcggatcg gcatcgatca cgccgacctg
    10981 ttcgccggca tccatcgcag ccaccgcgag ccctatcgcc agcgtgctct ttccactgcc
    11041 gcccttttga gttgccaaaa caatggcgta cattgtcgcc tcatccgtgc acaaaccaat
    11101 ttttcgtgtg cgcgcaggta ccgtccgcac cttttcgatt cgagtcaatt cgatgaggct
    11161 gttttgcact gttcaatttc aggcgggcat gaaccattgt ggtctgctcg gacgcctgcc
    11221 tggctctatc gcgtcagccc gacgcttgta cgcgcttcct gcttcctgcg ccttttacat
    11281 gttgcggcca tccacccgga ggtaccgacc gcgacgcagt cccaaaatgg ggcgcgggtt
    11341 cgcccgaccg atttgcgatc cgaatcaagg aggaggccca aggttggctt gggtcaggat
    11401 cagcccgtac gcgttactgc gtagtgggag atgttgatat aagtcaaata cgctggatgg
    11461 aaaagattga aactaatgaa agttcctttg gcacagagcc tcgggacaga gccaacaggt
    11521 cacttcgtgg ggacatcata ggcgcacggg cggaccagaa aaatttgaat aatcaaggag
    11581 tcggaaaatg cacaatcgtc tgaccaacgc caatacatcc gcaaatgtac ctacggttcg
    11641 cgtcgcagtc atcgatgacc atccgttgtt tcgcgccggt acggtccatg ctctggcgaa
    11701 aaccgatggc cttgaagttg tgggggaggg cgcaacggca gccgacgccc tcaagatcgc
    11761 gcgggaactg tcgcccaacg tcatcctgct cgatctgcgc ctgccgggag gaggtgtcga
    11821 agctatcacc aacatcaccc atgattgccc aaacgtacgt atcctcgtgt tgacggcctc
    11881 cgaaaacgag caggatgtta cctcaacgct gcaagcaggt gcgcgcggat atattttgaa
    11941 gggcagcggt ggaggcgagg tagtcaagac ggtacaagcc atcgcaaaag gcgacaccta
    12001 tgtggctccg agccttgcgg cgcagctgct gatcaagggc ccgcagatca aggcaatcgt
    12061 caagaaaact gcccgtgacc ttacttgtcg cgaagaagaa attttcggat gtgtgtcgcg
    12121 gggtatgtcc aacaaggaaa tcgccaaatc tttgaattgc acggagagaa ccataaagca
    12181 tcatatgacg aacatcatgc agaaacttaa tgttcgcaac cgcgttgagg ctgcgttgaa
    12241 gtccgttcga ttgctgcatg cctagcggtt gttacggatc gtcaaatacg ggagccgggc
    12301 cacgaaatga gcgagcccgt tcgcgtcgtc gttgttgata accatcgttt attccgagac
    12361 agcgttatca cgactttggg cgaaacggct gatttcaaag tcattgcggc gggtgaatgc
    12421 tgcagtgatg ccgtggccat agcgtgggaa ttc
//
LOCUS       DATILV010001007         5440 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_5105155, whole genome shotgun sequence.
ACCESSION   DATILV010001007 DATILV010000000
VERSION     DATILV010001007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5440)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5440)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5440
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5105155"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..176
                     /locus_tag="VLJ17_24380"
                     /pseudo
     CDS             1..176
                     /locus_tag="VLJ17_24380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000604943.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(189..668)
                     /locus_tag="VLJ17_24385"
     CDS             complement(189..668)
                     /locus_tag="VLJ17_24385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSV26149.1"
                     /translation="MRHVRLVTTAIALSVAAAGLSSITAAEQQLNPKAITIKLPDQIP
                     WKRNPAGTNETAVLYGDPEKPGPYVLMFKWLPGNMSQPHWHPNDRMITVLKGTWWVGT
                     GDKFDRDSTVPLPAGSYVTHFAKEIHYDGAKNEEAWLLMAGEGPATSTPASTPPPPH"
     gene            complement(794..2959)
                     /locus_tag="VLJ17_24390"
     CDS             complement(794..2959)
                     /locus_tag="VLJ17_24390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018262071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HSV26150.1"
                     /translation="MRNKSGLYLSVAVIAMMAAFAASSKPAYAQQTAAVSIGETDLGG
                     VVRGPNGPEAGVWVIAETTDLPTKMVKIVVTDDQGRYVMPDLPKTNYTVWVRGYGLVD
                     SPKITTMPGKIINLTAVPAPSEAAAAEYYPPVYWLSMAKMPDKSEFPGTGHDGNGINP
                     NIKSQPQFLREFKTDGCFHCHAIGTKATRTLSPLLGDFKSSEDAWLRRIQSGPASKDM
                     VETIERFGTFRGVKIFSNWTDRVAAGELPATKPPRPQGLERNVVITVWDWSNPKAYLH
                     DEVATDKRNPTVNAYGALYGATENSTDFVPIFDPVKNAVTTVKMPVRDPKTPSAASNP
                     IMAPSIYWGEEKIWQAQTIPHSLMLDEKARVWYAARIRPAANPDICKAGSDHPSAKMF
                     PINAANRHVVMLDPATKNFTMVSTCFPTHHVQFGFDPNRTLWASSGGAGAEVLGWVNT
                     KALEETGDEMKAQGWTPFILDTNGNGKRDEGYVQPNQPVDPAKDKRIRVGFYSIAPNP
                     KDGTIWGTVTGYPGSVVRVDPGPNPSETALAEIYEVPLPGFSPRGGDIDSQGVMWSAL
                     ASGHLGAFDRSKCKGPLNGPNATGKHCPEGWTLHPLPGPQLGGVTENGSGETPYYAWV
                     DQHDTLGLGKDVPIATGNQNDSLIALVDGKMVNMIVPYPMGFWAKGLDGRIDDPNAGW
                     KGRGVWSNTGNRTPFHIEGGKENSPKVVHFQMRPDPLAR"
     gene            complement(3054..3800)
                     /locus_tag="VLJ17_24395"
     CDS             complement(3054..3800)
                     /locus_tag="VLJ17_24395"
                     /inference="COORDINATES: protein motif:HMM:NF018420.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1194 domain-containing protein"
                     /protein_id="HSV26151.1"
                     /translation="MGTAARLLGFLVTFAAVFVSPAACTAEEVDLLLVLSSDVSRSVD
                     APKFKLQRDGYAAAIVNPRVLQAIRSGAFGKIAVSFVEWSGVGAQKIVIDWTVIRDEA
                     TAKDFSAQVIEAPRAFADRTSISGGIDFAMAQLARSPFQSNRRAIDVSGDGTNNSGRD
                     VTDARDEALAKGVTINGLVILSERPMSWNADHTNPPGGLDAYYRNNVIGGPGAFVMVA
                     ENFNSFGQAILNKLIAEIAAIEPAQHAKLR"
     gene            4198..4581
                     /locus_tag="VLJ17_24400"
     CDS             4198..4581
                     /locus_tag="VLJ17_24400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phasin family protein"
                     /protein_id="HSV26152.1"
                     /translation="MDKDATQQFEIPAEMRIMAQKSFGQARAAFNTFMTAAQDAVTTF
                     EGHARTTQAGAKDISEKALSCAERNVANTFAFVDRLVHAKDAPEFVRLQAEFIQMQMK
                     ELNEQAKELGEAAAKMAMKSVPPKS"
     gene            4886..5353
                     /locus_tag="VLJ17_24405"
     CDS             4886..5353
                     /locus_tag="VLJ17_24405"
                     /inference="COORDINATES: protein motif:HMM:TIGR01985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phasin"
                     /protein_id="HSV26153.1"
                     /translation="MPDTNPIVKLPEFPMVDIPKLEASAAQATSAFRAIAETGISQAK
                     ETYTKMKTAAEEATGIIETTCANASKGAADYGLKVVEIARTNSNATFDFATELLGART
                     FAQAIEISTAHTRRQIEALTEQTRELLSLAQKVAVHAATPIKDGITTIVKKAA"
BASE COUNT         1035 a         1603 c         1686 g         1116 t
ORIGIN      
        1 gagcatcggc cggaaatcac cggtcgctat agccatggcg ctctttggtc gcgtcctact
       61 tcgcggcttc atgcggcggg gcaccgctct cggtcatcgc cgagtacatc aaatctcaaa
      121 gggagacgcc gcttcctccc ccgcctcaac gccggggtct ccgcggcgcg gtctagatga
      181 gcgatcgcct aatgcggggg cggcggggtc gaggccgggg ttgatgtggc cggcccctcg
      241 ccggccatca gcagccaagc ttcttcgttc ttggcgccgt catagtggat ttccttggca
      301 aaatgcgtca cgtagcttcc ggccggcagt gggactgtgg agtcgcgatc gaatttgtcg
      361 ccggtgccga cccaccacgt gcctttgagc acggtgatca tccggtcatt gggatgccag
      421 tgtggctggc tcatattgcc ggggagccat ttgaacatca gcacataggg accgggcttt
      481 tcgggatcgc cgtacagaac ggcagtctcg ttggtgccgg cggggttgcg cttccatgga
      541 atctggtcgg gcagcttgat ggtgatggcc ttggggttga gttgttgttc ggcggcggtg
      601 atcgaactca ggccagcggc agcaaccgac aaggcaatcg ccgtggtgac cagcctcacg
      661 tgtctcatgg cttcctcccg ggctcatcat tgagcgcagc gcttttgaat ttcatatgca
      721 gttggtccaa gacgcaccgg aactactgca agccggcgaa cccggcttgc agtatccgtc
      781 aaatcgggtg cgctcacctc gccaacggat ccggccgcat ctggaaatgc accaccttcg
      841 gcgagttctc cttgccgccc tcgatgtgga acggggtgcg gttgccggtg ttcgaccaca
      901 cgccgcggcc tttccagccg gcattgggat cgtcgatgcg gccgtcgagg cccttggccc
      961 agaagcccat cggatagggg acgatcatgt tgaccatctt gccgtccacc aaggcgatca
     1021 gcgagtcgtt ctgattgccg gtggcgatgg ggacgtcctt gccgaggccg agcgtgtcgt
     1081 gctggtcgac ccaagcgtag tagggtgtct cgccgctgcc gttctcggtg acgccgccaa
     1141 gctgcggccc cggcaacgga tggagcgtcc agccctctgg gcaatgcttg ccggtcgcat
     1201 tcgggccgtt gagcgggcct ttgcatttgc tgcggtcgaa ggcgccgaga tgtccgcttg
     1261 cgagcgcgga ccacatgacg ccttggctgt cgatgtcgcc gccgcgcggc gagaagcctg
     1321 gcagcggcac ctcgtagatt tccgccagcg ccgtttcgga cggattcggg ccgggatcga
     1381 cccgcaccac cgacccggga tacccggtca ctgtgcccca gatcgtccca tccttcggat
     1441 tcggcgcaat tgaatagaag cccacgcgga tacgcttgtc cttggccgga tcgacaggct
     1501 ggttgggctg aacatagcct tcatcgcgct tgccgttgcc gttggtgtcg agaatgaacg
     1561 gtgtccagcc ttgcgccttc atctcgtcgc cggtctcttc cagcgccttg gtgttgaccc
     1621 agccgagcac ttcggcgccg gcgccgcctg agcttgccca aagcgtacgg ttggggtcga
     1681 agccgaactg cacgtggtgc gtcgggaagc aagtacttac catggtgaag ttcttggtcg
     1741 ccgggtcaag catgacgaca tggcggtttg ctgcattgat cgggaacatc ttcgccgacg
     1801 ggtggtccga tccggctttg cagatatcag ggttggccgc cggacggatt ctggccgcgt
     1861 accagacccg cgccttctca tccagcatca agctgtgcgg gatggtctgg gcctgccata
     1921 tcttttcctc gccccaataa atcgaaggcg ccatgatcgg gtttgaggcc gccgacgggg
     1981 tctttggatc gcggaccggc atctttaccg tagtgacggc gtttttgacc ggatcgaaga
     2041 tcggcacgaa gtcggtgctg ttttcggtcg ccccgtaaag cgccccgtaa gcgttgacgg
     2101 tgggattgcg cttatcggtg gcgacttcgt cgtgaaggta ggctttcggg ttcgaccagt
     2161 cccacaccgt gatgacgaca ttgcgctcca ggccctgcgg acgcggtggc ttagtggccg
     2221 gcagctctcc ggcggcaaca cgatcggtcc agttgctgaa gatcttcaca ccccggaagg
     2281 tgccaaaccg ctcgatggtc tcaaccatgt ccttgctggc cggcccggat tggatccgcc
     2341 gcaaccatgc atcctcgctg gacttgaaat cccccaacag gggggagagg gtgcgcgtcg
     2401 ccttggtgcc gatggcgtga cagtggaagc agccgtcggt cttgaattcc cgcaggaact
     2461 ggggctggga cttgatgttc gggttgatgc cgttgccatc gtgcccggtg ccgggaaatt
     2521 cgctcttgtc cggcatcttg gccatcgaaa gccagtagac gggcggataa tattcggccg
     2581 ccgcagcttc gctgggcgct ggcaccgcgg tcaggttgat gatcttgccg ggcatggtcg
     2641 tgatcttcgg tgaatcaacc aatccgtaac cgcgcaccca caccgtgtag tttgttttcg
     2701 gaagatcggg catgacgtag cgcccttgat cgtcggtgac aacgatcttg accatcttgg
     2761 tcggcaggtc ggtggtctct gcgatcaccc agacgccggc ttccggaccg ttcggcccgc
     2821 gcacgacacc gccgaggtcc gtttcgccga tgctgacggc ggctgtttgc tgggcatagg
     2881 cgggtttcga cgaagcggca aaagccgcca tcatggcgat aacggctacg ctcaaataca
     2941 gcccgctctt gttcctcatg tccggttcct ccgatgattt tctatggatt cttgctgatt
     3001 aatgcccccg actgccgaac cgttcgaaga gcgggcaaga cgcccgcgct ccgttagcgc
     3061 aatttggcgt gctgcgccgg ttcaatcgcg gcgatctcgg cgatcaactt gttgagaatc
     3121 gcttggccga acgagttgaa attctctgcc accatgacga aggccccagg gccgccaatc
     3181 acgttgttgc ggtagtatgc gtcaaggccg cccggcggat tggtgtgatc ggcattccat
     3241 gacatcggcc gctcgctcag aatgacgagg ccgttgatcg tgacgccctt ggcaagcgct
     3301 tcgtcgcgtg cgtcggtgac atcgcggccg gaattgttgg tgccatcgcc tgaaacatca
     3361 atggcgcggc ggttggactg gaacggcgag cgggcgagct gcgccatggc aaaatcgatg
     3421 ccgccgctga tcgaagtgcg gtccgcaaag gcgcgtggtg cctcgatgac ctgagcagaa
     3481 aaatccttgg cggtggcctc gtcgcggatg acggtccagt cgatgacgat cttctgcgcg
     3541 ccgacacccg accattctac gaagctgact gcgatcttgc cgaacgctcc ggagcggatc
     3601 gcctgaagga cgcgcggatt gacgatggcc gcagcatagc cgtcgcgctg cagcttgaat
     3661 ttcggtgcat cgacgctgcg tgacacgtcg gaggagagga cgagaagcag gtcgacttct
     3721 tcagcggtac acgcggccgg cgaaacgaac acagccgcga acgtgacgag aaaacccaac
     3781 aggcgagcag cggtgcccat gccgacctcc gtatgcgccc gcatcaaacg cgtactacat
     3841 gcagtttatc tcattttttg cgcgcttggt aacggattcc gcaatcgatg gcggcgacgg
     3901 gtagcccggt gcggcgcgcg agtgaaagcc tggtttagat cgtatcggta cggtcaatcg
     3961 ttgatcgtgt gcccctgata cgtggacttc cgcaggcgtt ccgcttcgtt tcgatcacgc
     4021 atccggggct gattgaagac aattgcctac cgcggcggga aaactcgttc cggcaaaacc
     4081 aaaatccttt gctccgagag aaggaaccgc gctagccttt cggtgttgac ggccaatgag
     4141 ctacgaccgt tggaacctca aatccggctc aaactctgtt cccgagaggt gaaccccatg
     4201 gacaaggatg cgacgcagca attcgaaatt cccgccgaga tgcgcataat ggctcagaag
     4261 agctttggac aggcgcgcgc agcctttaac accttcatga ccgccgccca ggatgccgtg
     4321 acgacgttcg aaggacacgc gaggaccact caagccggtg ccaaggacat cagcgagaag
     4381 gcgttgagct gcgccgaacg caacgttgcc aatacgtttg cattcgtgga tcgtctcgtg
     4441 cacgccaagg acgctccgga gttcgttcgg ctacaggccg aattcatcca gatgcagatg
     4501 aaggaactca acgaacaggc aaaggaactt ggcgaggccg cagccaagat ggcgatgaaa
     4561 tcggtgcctc ccaaatcctg aatgcgcagt cctaaaaagc aagccaccgg ggcaaagtgg
     4621 agtcgcggtg gttgtaagct gcttgtttcg caactctcgt tggattgctg cattattggt
     4681 ctgagtgcca actcaagcga ctctcatttc tgttgcgacg caacattttc atattgcgat
     4741 gcgttagggg cgtgctataa atagtctcgt gcaccgccgg atgtgatgaa ctcacgtcag
     4801 tgtaacacaa tgttgtgtgc gccgtgatcg acgagcagcg ggcgatcccg gcgcatgtgt
     4861 caatccgccc gtaagaggtt ttgccatgcc agacaccaat ccgatcgtca aattgccgga
     4921 gtttccaatg gtggacattc cgaagctgga agcaagcgca gcccaagcaa cttcggcgtt
     4981 ccgtgctatc gcggagacag gcatcagtca ggcaaaggag acctatacga agatgaaaac
     5041 ggctgctgag gaggcgaccg gcatcataga gacaacctgc gccaatgcct ccaagggcgc
     5101 tgcggattac ggcctcaagg tcgtcgaaat agcacgtacg aacagcaacg caacgtttga
     5161 ctttgcaacc gaattgcttg gcgctcgtac cttcgcgcag gcaatcgaga tttcaactgc
     5221 gcatacgcgc cgccaaatcg aggccctcac cgagcagacc agagaacttc tgtcgctcgc
     5281 ccagaaagtc gccgtccacg cagccacacc gatcaaggac ggcattacaa ccatcgtcaa
     5341 aaaggccgcc tgatcgaacc gcggtgcgct aacgagcgtt ggataggttc taacgggcta
     5401 gcgttggggg ggcgtgcgct tccggcccgg cgatcctggc
//
LOCUS       DATILV010001008        64781 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_5106908, whole genome shotgun sequence.
ACCESSION   DATILV010001008 DATILV010000000
VERSION     DATILV010001008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 64781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 64781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..64781
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5106908"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..932)
                     /locus_tag="VLJ17_24410"
     CDS             complement(<1..932)
                     /locus_tag="VLJ17_24410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26154.1"
                     /translation="MADEANPQAVPHDAPYDTIGLFPKKVASTEDYEQIGSGHRYIDP
                     TGQTRTKPWAVTDKASWDKVPDGASYVDPEGEVRKKKQFQGVSTTADTLYKMALTDKG
                     RKQALARTYGEDKVKEDEYGLWVDDDGVARKPGRGVTSAIGHVLSDAAPLAGGIGGGV
                     LGGVGGSVEPGAGTAAGAFGGMTLGAAAGRQFNNVVLSLAGIHEDMSTQVESMSEEAA
                     ASAVGQAGGHLLSKVPGVVKSASDAIGAAKDKATGVIEGVKENLPKVLESFGISPDRA
                     RYFLGTTPEVAKQAASIAERGGKVPPSVFAPEAPG"
     gene            complement(932..2506)
                     /locus_tag="VLJ17_24415"
     CDS             complement(932..2506)
                     /locus_tag="VLJ17_24415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26155.1"
                     /translation="MAEPAAQVVSDATPSANPYAGKSLDELVAMPNDLQRLGVSNLGE
                     KINRDEAISAATKRAASEHSAEMQHWHKAEGAQLNDLKPWDIRTERQKYAYDPIEAFG
                     SFASVFAIAASAFTKTPMENALNGAAAAMNAVRDGKEHEYNLAHQAWQENTKLAIERG
                     KMMHEQYQEALEMMKTDYERGTQMMKESATRYGDIQALTLLEHGYDMKWFETIDARNK
                     SVVGMQKALDADLQNEGTSMIQSVLKSDKRFYGTPQEKFQLYKQIFQPKETAEELAIQ
                     AELAKNPTAPPERWAEIHRSFLPAYLTGESGGKGLAGIERKIVLDHVAQKQQEAASAG
                     KEWTTKDEENALAEGLRFAKQAGAAGITGNQMVKGETQIGHFDEASGKVDKILSLINK
                     HTLPVGAPGAAARLGEKLSNILGSNATDRAELESAISELKLIAPRLLLDANGRPLSAE
                     HAEVDKIIRGLNFGDTTANTIRRMQELKAEFGRLREALAARYRREGEIEGAGGDKAKP
                     KKNDAPWLRDPVVGSP"
     gene            complement(2510..3778)
                     /locus_tag="VLJ17_24420"
     CDS             complement(2510..3778)
                     /locus_tag="VLJ17_24420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26156.1"
                     /translation="MPDLGIGEAIAGLGSLLAGGGAATGATALGGAAAAAPAAAGLGL
                     APALGGAAAGFGAAEGLSALTPDAAAASTPFADIGSATGGNFALGANPTAGFAQGLTT
                     GAADVPGTIGGMPIASAGDGSLNPMNWTGWSATDAATGAPAGSGTFPDAASGAAPVAN
                     AAAAPLAPVGASPVDLSSTATAGAGQGVQAAGAPGFPTAAGSGTSFTPVAAPAAGAAP
                     AVTPAAATPNPLESLMHDPLGTLGSGAAKSLTSNPLGVLAGATGLGYSILQGQKATAN
                     QKALQDAASKEAAQANTLSSYITSGGLPPGLAAEVAQASASAKASILSNYASKGESTD
                     PSQNSALAQDLAAVDERAAATQGQLATQLLSSGQTAAGMSDQLYTTLVGIDQTQATNM
                     GKAIANFAGSLAGRTAIPGTSITIGAGGTT"
     gene            complement(3808..4329)
                     /locus_tag="VLJ17_24425"
     CDS             complement(3808..4329)
                     /locus_tag="VLJ17_24425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26157.1"
                     /translation="MSKRTCKKEPHDVARKCIEQMLARQYAETGDNSVPLAPDFNLYR
                     AMEERGSLFVLIVYERESDDEPSPRDDQSPGRPIGYAVGVYHQHPNSVGMMIGTIPTY
                     YVEDGAGRVFIQKAMLEQAALRLCAAGAKRVRIETNPKASNGRMLEKMGYRPIAMTYE
                     IDPSEIQQEKLSA"
     gene            complement(4295..4852)
                     /locus_tag="VLJ17_24430"
     CDS             complement(4295..4852)
                     /locus_tag="VLJ17_24430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26158.1"
                     /translation="MAQTKLAPSEGFNAAPKVERPLVRRFELADFNRHLWLRDRIVKI
                     CPHMTAYAVDSFLRNQLYSPEFLFLFMPHAVGLAQVIRTTMFEPTPVIMERFVFAENP
                     NNEEHIAEAADFYGEMVRWAGNQGATKIIVLQHSDVPMETVDKIFGKRVMEVRQLVAD
                     INPKRRPGLSKEDPSEQANVQERTA"
     gene            complement(4862..5200)
                     /locus_tag="VLJ17_24435"
     CDS             complement(4862..5200)
                     /locus_tag="VLJ17_24435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26159.1"
                     /translation="MAIAGIFNVPGTPEEFSQWSFDNAAHHVDINRVIFQISGINIAS
                     FVLDPMPLNDIGAWLYQHQQMHTTTNGILSVSGFDLTDVDFRDKGQLAGWIQMHANEH
                     FQWANQLLIA"
     gene            complement(5202..5627)
                     /locus_tag="VLJ17_24440"
     CDS             complement(5202..5627)
                     /locus_tag="VLJ17_24440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26160.1"
                     /translation="MTIKQRYLYRDAGDHIAFRDASIYVIDNRDKRGLDGRRLYIDEH
                     PQFVGEEPPWVAPGHFLLQPTIEKAADEIDFDHKPTDEELSAAFPNFQKYKMFKAWLE
                     NRRKAERDAADKAASDARAAEMKAFEAHQAAVAAVLAKA"
     gene            complement(5624..6763)
                     /locus_tag="VLJ17_24445"
     CDS             complement(5624..6763)
                     /locus_tag="VLJ17_24445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26161.1"
                     /translation="MSLPFIFANATELDTPNLDSNFAAVGAGLTIPCTATGTNAVTLT
                     PLANFPTISAYTNNAPVFGFQAVANTTTSPVTLQVGGLAALNVYKANGAALIGANDFL
                     IGNTYYVVFNQALNSSAGGWVVLNPGSSAATAGAVQSAFKNLVIQNGGTPNTQITLTA
                     DSVAVSDGSANFTTLLTVNVTISSATSGANGLDTGSIANSSWYAVYVIYNPTTLTTAG
                     LISLSFTSPTLPSGFTQFSRLGAFRTDGSHNFLRILQKGRRAQYVVTTATNTAALPII
                     ATGTAGTPATPTFVSLATTNFAPTTASCLFLNVQVASAASIIVAANANYGGSGSTTNA
                     PNFNLQAAAANADMTVPSSVVLEAASIQWASTGGVVFIQGWEDNI"
     gene            complement(6765..8576)
                     /locus_tag="VLJ17_24450"
     CDS             complement(6765..8576)
                     /locus_tag="VLJ17_24450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26162.1"
                     /translation="MTIKPKPATEEQGNTYLPPGPPPIICEEFMGINTSTSRYGVDPK
                     QLFWCDGWMPLGPKLLRVMPDIGTKLWTSPTGAQISFFDFANIGAAPIMVSFLNDGSV
                     WQVNTTTKVQTQMLPITTIKNPAQTNVGMSQWGSQYVIIVANQTNGYWLWDGTNIYTA
                     GGISPQVVITNPGSNYSNPIVTVSGGSGSGISLAATVSGGLITKITVVNPGSGYLATD
                     TLTVNFSDSTGSGAAATVTLMPFGINGTDVETFAGRVWIINGALLTFSAPGSITNFST
                     SSGGGQTVSVDSFLRVGYTKLLQTNGFLYLIGDSSINYISGVQTAGSPPSTTFTNQNA
                     DPEVGTNWPLAIDTWSRNIVFANPFGAHVSYGAAVTKISEPLDGVYQTVPGFAGFLPS
                     SAKHILFGKKIWMLLLPIVDPVTNATGNKLLIWNGKIWWSSPQSISLLYIQHQEINSV
                     LTAYGTDGLNVYPLFQTPSASFMKAVQTKFWAEPGGYQFEKAPSRLWALLNFQKTSPI
                     TFQVSIDTDQTSNFISYTSPLNTIVVKNASKKIIPVKNASGTTILTKSVLGGVYAFGG
                     QEVAEVGAVTGITLQTTEPSLDLWSLMMQEEIVQYRG"
     gene            complement(8576..9502)
                     /locus_tag="VLJ17_24455"
     CDS             complement(8576..9502)
                     /locus_tag="VLJ17_24455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26163.1"
                     /translation="MALFEYSRQVRRFLSDKRFQDLAEEDINSYINRARREIALKTDC
                     IRFLTPIAGAITNWTVTNGGHGYSNAPVVAVSGPDFPPGALPFPNGLQATVQATFQGG
                     VLTNVANQNGGFGYFQPQLIITDPTGTGAIATPQTQAINVLNQGQEVYPFSGINLSTL
                     PGAGQVYRVQSISIIYSNYRYSLPVYAFSIYQAYIRQYPFQYQYVPTFASQFGQGTAG
                     SFYVYPLPSQTYQYELDCLCTPADLTTDQDVEALPGPWTDAVPYFAAHLAYLEIQNFN
                     IAKMYLELFKEQTLTYSVAARRGRVVNPYGRF"
     gene            complement(9505..10290)
                     /locus_tag="VLJ17_24460"
     CDS             complement(9505..10290)
                     /locus_tag="VLJ17_24460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26164.1"
                     /translation="MLTYYETQTQRLLQNPAATKALYATSDLDSWINTARGQLAGETE
                     TIRAIGTLLTVPGTRSYPFSAIQFGGSPAQTGIQGTLNVRRVGQQIGVGPGLKFLFVR
                     SWEWFDHYHLNSPNPQVGPPVRWAQFGQGGSGTGSITGIGAGTAVLSGSLLIDPIPDI
                     QYTLSVDCVCYPQALAADTDIEAIPYLFTDAVPFFAAYYALLSAQTNARLADAERYFG
                     HYETFVERARKATNSSVARTLFEQASDMSQAAKFGAQAKAAGA"
     gene            complement(10309..10551)
                     /locus_tag="VLJ17_24465"
     CDS             complement(10309..10551)
                     /locus_tag="VLJ17_24465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26165.1"
                     /translation="MPETYTRSSSQVVTATHNANSAAGSTKTISIPDSKIEQGSRVQA
                     MRSGTSFLTKGLDGTLTLHVFDAELSTPNNPVLRRV"
     gene            complement(10564..11751)
                     /locus_tag="VLJ17_24470"
     CDS             complement(10564..11751)
                     /locus_tag="VLJ17_24470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26166.1"
                     /translation="MPTPLSGPGVGLPLPQNLYPSELGNSPYDFSSNKQALAPGQELP
                     IPAGNWYVNLGSYLVLEFLDPITGVWQFAPATAWNGAVQYVKSDGFNVRIANRTGCLV
                     GAVVTSYGNGSYVQASTAIAVTGSTATFLPIIGGQLSVSGTFTVAVPTQGAGYGVPPM
                     LFIPSPPPAANNANGVGGIPATAWLGMRTGTVSGVTFNNPGAGYPSAPTPVVLPNPTD
                     PNIATGITQASVAFSLTGAGSLTGVLCTNSGAPLVNGSLSSITLSVTGAGATASVAAL
                     IMQTVLTATVTGPGTGYGTALSPVMTTGGGASAGTITNSPEFLGLAFRPRQAQIAITP
                     GNTSVSAATVGTIYDGGLFLSAPTAAFPISGAGGTGSTFTLATVGLMMGGTNDIALFQ
                     PAP"
     gene            complement(11784..12830)
                     /locus_tag="VLJ17_24475"
     CDS             complement(11784..12830)
                     /locus_tag="VLJ17_24475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26167.1"
                     /translation="MPLPGIGVAPAAGALYTELSSVTRRAFVPRLFVQIYFGSPTLFY
                     MTGNAQRAAGGLNQVTIPMQGQSMVQGQFTNYGGGFNSPVITPGIQNGQFNLAYWVVP
                     VPLPFGETVIQATDREISLLKARMNDVYAVTRQNMARLLFTNNSSNPVLPDSFQSAFD
                     NGTNFPTYGGINRLAPGNSAFQGQYINLNSGTFSLGTAGFTRQSMANLLAFVTDQAGG
                     EAPTFVVMAPGDYATLNNTFQAIETQFVNPGASYVDNMNTQVRSSFPNMVISGVPIFA
                     DHFCPKGNVFGVNVKYTSMYLSEDAAFDFSGFYSLVPLGQIGQQGVVVVGYDLISAKS
                     SSGFWGYNLLGASF"
     gene            complement(12893..13489)
                     /locus_tag="VLJ17_24480"
     CDS             complement(12893..13489)
                     /locus_tag="VLJ17_24480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26168.1"
                     /translation="MVDKKVEISEHEFLQNQQLRTTVAKLLSNPQAKLLVQKAQKVID
                     PNVATPELDAETAREQLLKPLHDQIAALKTDVEKEREDRANNAKLASVQAMQDAAWAA
                     LKKEKWTQAGIDGIKKVMEEKGILDPRDAAAVWLRDNPPAVPLNNSGSGAWNFMDLPA
                     EGNEEDLKKLIDSKGENMPLVDKMVRDALMDVRGQRAA"
     gene            complement(13501..13686)
                     /locus_tag="VLJ17_24485"
     CDS             complement(13501..13686)
                     /locus_tag="VLJ17_24485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26169.1"
                     /translation="MSNLNIFQNSTKSVPTSDEQIVRVGMEQIDIGGRKSHLPKQEKS
                     GAMTLSHVGNAGSTPGK"
     gene            complement(13890..14276)
                     /locus_tag="VLJ17_24490"
     CDS             complement(13890..14276)
                     /locus_tag="VLJ17_24490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26170.1"
                     /translation="MTPSGVSPGQPPSGVPGQQPPMGSSPVTQGTPNRGYEAAGLQRL
                     GLVVKQLGELVPLLGPTSDAGVAVIDALRKLTKFVPSGSVTPAGERNQLQSQMEKNAQ
                     NNQQMQALRQSQQQQPGAGQPPARAA"
     gene            14444..14737
                     /locus_tag="VLJ17_24495"
     CDS             14444..14737
                     /locus_tag="VLJ17_24495"
                     /inference="COORDINATES: protein motif:HMM:NF024139.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSV26171.1"
                     /translation="MYISLYQHVLLAKVIFMALTSELAAEDRFLTIAEAAEVFRVTPD
                     TIYRACKQARDKKSGLRHYRIGRRAIRIRYGDLLAFTQNNASAFRNKVKKIAP"
     gene            14746..15093
                     /locus_tag="VLJ17_24500"
     CDS             14746..15093
                     /locus_tag="VLJ17_24500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26172.1"
                     /translation="MFQLTIVMPQSQITWALTFKEEQTAVAAFAKFKDEQSNQVEIID
                     DFGQRFYGGRFKDVMMEDLEQTKTLFIDRQLRQWHTQIDAQRAAAADPKLKTEMMRRG
                     NGGQPMLTPQFNS"
     gene            complement(15090..16457)
                     /locus_tag="VLJ17_24505"
     CDS             complement(15090..16457)
                     /locus_tag="VLJ17_24505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26173.1"
                     /translation="MQAEGKDLHPSYYAKLIMPWQFGVYNESENDINKQPAVCETTTM
                     TMPEVWRRIYHLPNAKEMYKRIAAHAMTGNSNADPQSFFHQVLSSSQLQTGVQQSTRP
                     LPGGIVQLNNDPNYAVMGPSVMAPTVKAHELWVQGKTDYVTVIMIEPDIIIAPLYKHE
                     NLLIPGSKDEHGEVEGSMVQPYRLIQANVVTNWFWGRSELVDLVEPQGLLGTWLDDLK
                     RLFGLQVDKILAFASENGMTDELFARFRATGYMNVGQGGQVNDLTPKFPPEMLPLIKW
                     LIETINWLGGFPNIMQGMGEPGVRAGSHASTLLKTASPTLRDRALLVERQCANAADLH
                     LQIKEAKEERRYWVSAEDMEGTAFMLTDLPQDWRVTVDSHSSSPIFNDDNAQLIMAGL
                     KGSVVGPNYVLDNLPFPNREAARAEKKEMQQAQQKQIEMLLKSDPEGVQRVMERKLLA
                     GGGRR"
     gene            complement(16838..17410)
                     /locus_tag="VLJ17_24510"
     CDS             complement(16838..17410)
                     /locus_tag="VLJ17_24510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26174.1"
                     /translation="MAVRLKCPHCEEKFLWQFSDKNQWPKHCPECGEYVGNDRADDDI
                     VMPNILSPSTKSNDRLYRDMETASEQRVHAAAEMAGCDASDMSGLKITNLNDRRDAEI
                     AAMPINNEVTRAMAAPNADRAMGFQANGAMLSPDVMSGPAPNAGARMRTVLHNYHQHQ
                     VAKHLPGLPTDVVSERPGNETTQPGYRRRG"
     gene            complement(17410..19326)
                     /locus_tag="VLJ17_24515"
     CDS             complement(17410..19326)
                     /locus_tag="VLJ17_24515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26175.1"
                     /translation="MRVEQAFYVFLNRCYIYSKDTGYTCLGERLYDGQRRFITLVFDC
                     LERDIHKIFVLKSRQLGLSTIARAMTIFLLGIFDGLKGAVVFDTDQNKVETRAELEVM
                     IKALPKTLKFPGIKGNNRSGLTLKNDSKVLFMSAGTKKTKGSGVLGRSVGLAFAHLSE
                     LCSYDNEEGLEAFDNSLSDTNPDRLYIYESTARGFNRWYHMWLDAKKDPHCGCLFLGW
                     WSKPSQVIMRDDADFLRYGVPPVSEKEADQIATVKRQYGHDVTIEQLAWVRRKMDPTA
                     EKEGDAEPEFTGSTLRVQEQPWTEEEAFQQTGAAFFAPEKLTQQTNMHVSTKYQSYMY
                     LTGDEFVDTEILRAPNSKMVQLKVWEPPVTTGGIYVISCDPAHGENEDNDRASIQVCR
                     CYADGLDQVAEYASTLVTTQHLAYVLASLLGWYGQGTNQVRYVLELQGGGDSVFRTLK
                     TLRYQLENGRQPREYKDGMYDIFRNVRTFIWTRADSMAPGHNYHLKTTVANKVSFMET
                     LRNYVQNGMLHIRSLDLIAEFNSIARQGDKIEAPDGMKDDRAMAMAFAVHCWDEKERR
                     NLITQARTRLGERRRQNMAIADQVALFQQNQLTMFFNRQQQARMIAQRQATYQSWRGG
                     GLTVQPQQRFGGRR"
     gene            complement(19429..19626)
                     /locus_tag="VLJ17_24520"
     CDS             complement(19429..19626)
                     /locus_tag="VLJ17_24520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26176.1"
                     /translation="MVAELTQDVFERINAERRRNGMAPLERQEALCLARRKRLEYTDE
                     QWEESGTHFLFSYLTVVPLPN"
     gene            complement(19681..19962)
                     /locus_tag="VLJ17_24525"
     CDS             complement(19681..19962)
                     /locus_tag="VLJ17_24525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26177.1"
                     /translation="MTIDTLDSVERAEKQNPAIPFETMALTIRHNEGASFGGAIVIVP
                     PDGAGHPIEILVLDSTITPGDFYAMLTSRIQGVVSELDAKARQQNPHWR"
     gene            complement(20161..20508)
                     /locus_tag="VLJ17_24530"
     CDS             complement(20161..20508)
                     /locus_tag="VLJ17_24530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26178.1"
                     /translation="MADNPDVDDIHFFKDHPDRKAHIRVPAKQRYVDKQRAVHFGDEC
                     EAEFQSVGSHDKARRRIILLRSDHRGNLFPGNRILKIPFLLFADETVEDTDEVLLPIC
                     FDLMMGKAREYNE"
     gene            complement(20501..20923)
                     /locus_tag="VLJ17_24535"
     CDS             complement(20501..20923)
                     /locus_tag="VLJ17_24535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26179.1"
                     /translation="MPALTQDEIAVLMIAAEGEPMMPIGRWEKPVEALVSKGFLKGHP
                     SAQDPTGRHNCYITDAGRQALQSEEAETDKALAATLNKFGARATAQKQMIDEVTKAAE
                     SLARAAVIAKAATDDSLNQAMKNCLNLLKQKLNEMGYG"
     gene            complement(20949..22361)
                     /locus_tag="VLJ17_24540"
     CDS             complement(20949..22361)
                     /locus_tag="VLJ17_24540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSV26180.1"
                     /translation="MGDRQTALKLFNQGVSVALDKTFSTNLSQAWQLFNSACFVDPTF
                     GEAFYQCGCNANDNPSPNDLSHASVACFRRALECSDLGDKRGRALTNLAWKLHGIGKD
                     TEALEYVKQALDYDPTLAGAWLNYSQIIGTLGDTKKGVEYAKKALDFEPANTTYGMAY
                     AFALLFDRQLAAGLDAFEVRFRYQLQQFMGYPYPKWRGEEGKQLLLVADQGLGDTLTF
                     ARFVEETVKRCSYVHLGVQSELVRTFMNAFAHLPNINIMPTPFTFPEADYWTTFVSLP
                     YALGLNDYKIRKTKHITPIYAPLADKSWKVPDRKLHIGIQWKGSAKNEIDKHRSLDVR
                     WFLELYRVPGIQLYSLQVGPDAQDVHNVGAGMLIKDMSPYIRDVTDTFGVLHNLDMVI
                     AIESSLAHMASTMDMECWIPYSWCGRDYRIGWNGSDIIWSSKHRTFNQLENEGWLQVF
                     DRIVEALKERVSEQGRPSAA"
     gene            complement(22336..22560)
                     /locus_tag="VLJ17_24545"
     CDS             complement(22336..22560)
                     /locus_tag="VLJ17_24545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26181.1"
                     /translation="MTKSELLEKIKAVCMWCRQEKPLHYRVDTNEYTHQWNEKSAIDS
                     VIVNHRMCDADELRKKYRSILEDGRPADCT"
     gene            complement(22538..23257)
                     /locus_tag="VLJ17_24550"
     CDS             complement(22538..23257)
                     /locus_tag="VLJ17_24550"
                     /inference="COORDINATES: protein motif:HMM:NF012464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HSV26182.1"
                     /translation="MMHCYVRVSTHEQKTNTSPEDQERICRSVAMAKGIGSMDVVTWY
                     DLDVSGSIPLGERPNGGRMLECLAAGDVIVASKLDRMFRTALDALQMAEEFKRRKVDL
                     ILYDMGPESVLHGTMSTAFFQIGAVFAQMERSRIIERVSGGKRAKKANGGHVGGEAPY
                     GFQIDGVGRAARLVANPREREILDCVQSLQSQMAVDFIRRELNARGYRDRSGNLFRNT
                     QVRRLIKRNLQEFTGDEIRVA"
     gene            complement(23801..23913)
                     /locus_tag="VLJ17_24555"
     tRNA            complement(23801..23913)
                     /locus_tag="VLJ17_24555"
                     /product="tRNA-OTHER"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
     gene            complement(23965..24975)
                     /locus_tag="VLJ17_24560"
     CDS             complement(23965..24975)
                     /locus_tag="VLJ17_24560"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSV26183.1"
                     /translation="MKCVVLGAGGFLGFHLCNRLKREGHQVIGVSRRQQDYGPVSCDS
                     FLCHDLTRSLLASEARFIFADADEVYQLAGEVGGMGYIGNSDNDAHILANSSRINANV
                     LDWCKQFGAKRIFFASSACVYPDTQGDGARESLTEGYFPSNAFAREKLFAEALYLAHA
                     RNYGMTIRIGRLHNTYGPCAPYRGDRAKSVMALCCKVAEAPAWGEIEVWGDGHQRRSF
                     TYVDDAIEGIVRLMRSDCREILNIGSAQLVTINQLIETICYVADKQVGKKYVAGNVGV
                     FGRNSDNTLILKELGWAPRTVLHVGLKPTYHWLLRQLQNEKKSDTVVRTTTDSPIEKG
                     MV"
     gene            complement(24985..25233)
                     /locus_tag="VLJ17_24565"
     CDS             complement(24985..25233)
                     /locus_tag="VLJ17_24565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26184.1"
                     /translation="MTNLFEGKPDARQSDDTKMPTSRFRPRYRALTTEEKALHDEIKS
                     HAETMEALYAKVKAGRYNALAITALEQSVMWIVKELTS"
     gene            complement(25217..25762)
                     /locus_tag="VLJ17_24570"
     CDS             complement(25217..25762)
                     /locus_tag="VLJ17_24570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26185.1"
                     /translation="MTTEQAIVTHDDVTRKMADNLTDPTRRGHVPPISTAPATSVATK
                     PILLVDFDGVIHSYKTRWLGARVIPDPPVPGALEWLDNATNYFDVQIYSSRSHDPAGV
                     QAMCSWIVAYAVHVFGSSAKAIDLINKLKFPTTKPPAFLTIDDRALTFEGTWDRFDPQ
                     LLLQFQPWYKRKKEMTDDKPV"
     gene            complement(25846..26199)
                     /locus_tag="VLJ17_24575"
     CDS             complement(25846..26199)
                     /locus_tag="VLJ17_24575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26186.1"
                     /translation="MADEIVWFRCKKCMAVTRLLAYIDMWRRYTNARTLASFIDEHIE
                     HCYANVQTAHVDNETFFDLVSFSDLAKVIDSADEDAKEIPPGEETTSQMHYEELLAEL
                     RKNRPDAAELLHAKS"
     gene            complement(26202..27512)
                     /locus_tag="VLJ17_24580"
     CDS             complement(26202..27512)
                     /locus_tag="VLJ17_24580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26187.1"
                     /translation="MNKVAIAFLTKDRPELTQQTIVPLFQPDRFDLFWIDGSVTPNGR
                     NAPLLEKIDRGAVFELHQNIRGGADAAVAYAYTKMLNHHKYYDYMGIVENDVLLPGDW
                     FDRTMALFRMGDVNGFQVGAVSARAYEDRILFQRDSGYAAMHNLGYGMQILSRPAAEL
                     HLKYFRTGNTRENRKVFMQLAEVDVGRWFPWRNLDQAIVSDWHQDLVLASEGYASLAL
                     TPSDVEMIGQVPPLKEQGLTIVKEPVNVLRDDVKFENYIARLNAIYNGEYVIDTAPRI
                     PLLNHDGMFSTIFAHHVGALGGRYVSSNHGIGDVADNWQLKWSQGYGPFAYEAKQKGA
                     TIELPINGPCDLVVSGGKKGGRIEVTDPYTKYRAFPDLPPEQPHQPFITIPVPAQVAY
                     RTLKLVAHDPGVTFYAVCVKDEQNWDKSSSFDWDKLPAVEPLKE"
     gene            complement(27612..28463)
                     /locus_tag="VLJ17_24585"
     CDS             complement(27612..28463)
                     /locus_tag="VLJ17_24585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26188.1"
                     /translation="MMQWDLVIVAPGRLGALAKPGPRGVQPGLSKATVHLQQVLSSEE
                     IKCRARTDIPAYWKWCDEEHECIMLFDSGGFKLQHFNKLSEQFRRDLDGKHWRTRQTP
                     YRNPARASNPGGLASLFAQPATVHTSSFVSLGALYPDKPKRAVEDAGIRAGEIIGYRA
                     WQVDPQWRLHSTFRSKTIWEPSGVVTGDVNEEREGVYAFKESEEVVFYCAMFRCWRGS
                     SLFATDLNGDDNNWPIVFGTVSLWGVVIEHEKGYRASYAAVGDLIGSADLAPDDLNKL
                     RKIYGSG"
     gene            complement(28460..29509)
                     /locus_tag="VLJ17_24590"
     CDS             complement(28460..29509)
                     /locus_tag="VLJ17_24590"
                     /inference="COORDINATES: protein motif:HMM:NF015190.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26189.1"
                     /translation="MKTAIVTTTIRVPEVLRLYRKFMPHAGIFIAGDEKSPSAQIRAL
                     CDDLPGGWGFYYSLEQQRKSDWEVVKFLPCNSMLRRNIATLEAVKWGADIIYMIDDDN
                     IPMSYDHSAAFTFLGSIGDPRKYNFSGLEIRSPLQWFDPNELLDPPTVQRGYPLRIRR
                     ITQQFTVHPVTDAKIGVVSGLILGSPDIDAVERIVTNPTRLNVSELARAGVVVNPHRC
                     MTIFNSQNTAFVRELAPAMFMPLIDGEDTRYHDIFASLICQRIMETLDLYVHLGRPFV
                     YQERNQHYLLDDLALEMDGMRGIEDFNTCLWQTTCPRENSVLANVKKIYDEFSCFSPD
                     LTAAWIADCEKAMAG"
     gene            complement(29950..30327)
                     /locus_tag="VLJ17_24595"
     CDS             complement(29950..30327)
                     /locus_tag="VLJ17_24595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26190.1"
                     /translation="MSAFDDLTAAVATLTTDVATLTTNTTNLTTAVIAEIQALRDALA
                     NGNTNAVEVAAQNIENLNKQIETGNAAIAAQTASLASSLPPAPTPAPSVSPTPSAPSS
                     TPSASASSDASAPAPTTSAPASS"
     gene            complement(30458..31132)
                     /locus_tag="VLJ17_24600"
     CDS             complement(30458..31132)
                     /locus_tag="VLJ17_24600"
                     /inference="COORDINATES: protein motif:HMM:NF012451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HSV26191.1"
                     /translation="MGVSRKHRNPYDVLGVSNDASDDDIKRAYRERAKRAHPDKGGSS
                     EAFAEIHSSYVVLSDHEKRARFDRDGTVDDNPGNQFSAAVGIVIAALMAEAGGIVTRG
                     GDPAKTDLFAVVRNSITRQIQEFETKKSACQNTVDKMRALAKRIKRKKAKKGQPEQPN
                     FLARAVEEQANHTAESLGTIETQLDNHRAALALLADHEFEQAMQEPTTYISFAELANL
                     HRGSTY"
     gene            complement(31242..31315)
                     /locus_tag="VLJ17_24605"
     tRNA            complement(31242..31315)
                     /locus_tag="VLJ17_24605"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(31279..31281),aa:Met,seq:cat)
     gene            31321..31722
                     /locus_tag="VLJ17_24610"
     CDS             31321..31722
                     /locus_tag="VLJ17_24610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26192.1"
                     /translation="MVGLIARDDDETFARGEMVRLEFEIGKKEENSEREKSKLESVHG
                     GSPLLEINATVAAQYEVIRDAIRKSQEDCGREGKGLCMLHQSKAPTSGYFVVATKVLG
                     VELITTTVGGSMRHVPVVPEAGGWKNLQVGQ"
     gene            complement(31736..31900)
                     /locus_tag="VLJ17_24615"
     CDS             complement(31736..31900)
                     /locus_tag="VLJ17_24615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26193.1"
                     /translation="MLDGQMDYEARRQALEFAVKHVPYDDKSSMTVVAYASAFYEFLE
                     GKQTSEQSSD"
     gene            complement(32116..32334)
                     /locus_tag="VLJ17_24620"
     CDS             complement(32116..32334)
                     /locus_tag="VLJ17_24620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26194.1"
                     /translation="MTDLATLIAEIEKEFPNYWWLVRNDGPKRYFAHIHPEAEPNGGA
                     YGPSPAHALRGARMLARAAKQETQEAPH"
     gene            complement(32643..33113)
                     /locus_tag="VLJ17_24625"
     CDS             complement(32643..33113)
                     /locus_tag="VLJ17_24625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26195.1"
                     /translation="MTLYLDTEFNGHAGQLISLALVSSSSPDYFYGVLPIAKHRYVES
                     WVIDNVLPHLNQDPEPLSHFRDRLRAFLQRYAGKEIVADWPGDFAHLMGLMCGPSYDK
                     SFIIPCTLVLVESGDLQSDTPHNALSDARALMKWHRVKEHEENEARLAFLRRGD"
     gene            complement(33110..33262)
                     /locus_tag="VLJ17_24630"
     CDS             complement(33110..33262)
                     /locus_tag="VLJ17_24630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26196.1"
                     /translation="MLLVTIRGQRLLVPREHFNTFFELLEKYSKTYQLHEYIPIWDPE
                     SKEDKK"
     gene            34137..34304
                     /locus_tag="VLJ17_24635"
     CDS             34137..34304
                     /locus_tag="VLJ17_24635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26197.1"
                     /translation="MEYVRTIADTIKVLAQLAAIVIVVGMIFAKPRPQPDIIGDLISQ
                     NVVQKDLSRHR"
     gene            34408..35094
                     /locus_tag="VLJ17_24640"
     CDS             34408..35094
                     /locus_tag="VLJ17_24640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010661811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SprT-like domain-containing protein"
                     /protein_id="HSV26198.1"
                     /translation="MTKKAHKKSPALTTAQYDQFQRAFDFFNKSLFQSSLPHALITLQ
                     RHAKTRGYFSPNRFKGRYAKEHAHEIAMNPDTFLSRKDVEILSTLVHEMVHLWQHVHG
                     KPSKSHHNKEWGAKMKEIGLHPSATGLPGGKETGQKVTHYIVKGGSYEKQFAALLKTK
                     FGKLRWDSLSDSPNAKKKRASKTKFSCPVCDQNAWGKPDCLLICGVCHEADEDEIVVM
                     IPQAPEGEDD"
     gene            35094..35333
                     /locus_tag="VLJ17_24645"
     CDS             35094..35333
                     /locus_tag="VLJ17_24645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26199.1"
                     /translation="MNIERIQRKAHERGLSVPLRYPVENILRQLPRQCAFGALDSARF
                     YRIHGTKSQRRTAFACLRESANDHARWIKRGGYLP"
     gene            35352..35675
                     /locus_tag="VLJ17_24650"
     CDS             35352..35675
                     /locus_tag="VLJ17_24650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26200.1"
                     /translation="MWYRLWQFKTANFTAQLDWKFEQDPDLSWADEDVLRAIEAGIYN
                     NVTFRVRVLFRGREISADYLGNSVYENVMDFRRERRGYFRDMVRTTTAEARKAFANMP
                     RIKAA"
     gene            35730..36548
                     /locus_tag="VLJ17_24655"
     CDS             35730..36548
                     /locus_tag="VLJ17_24655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26201.1"
                     /translation="MKTIIHTYWYNTANEHERQEYATLRDKLKAEGYRCFEALGEYDY
                     RGKDLDNREITLETQHLFDNQWNTAPIEGVSEQGLRVFDWALSVYPDNRKVKAGYWLE
                     QTAEMRDIRRNTVKCGYCGKQEPAAKGYVFCPHCIDSEYLKEDELYLTRLRPVDEGRK
                     PVPPLTEAEKAHLLPLYREAQLHGSTARGKLRIAKERQEVESKFERKTRSAKIERDGM
                     IWLMDRGFRVDNVIYYDHTEKFCFGWRGAMADSVKSALLDVLSEFPFDYEFKNR"
     gene            complement(36980..37171)
                     /locus_tag="VLJ17_24660"
     CDS             complement(36980..37171)
                     /locus_tag="VLJ17_24660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26202.1"
                     /translation="MLVKFINSSSETVWINPLHVRIVIECKHGTEVVWGEGEDSFTTI
                     VFETAEVTVERLNYALARM"
     gene            complement(37377..39737)
                     /locus_tag="VLJ17_24665"
     CDS             complement(37377..39737)
                     /locus_tag="VLJ17_24665"
                     /inference="COORDINATES: protein motif:HMM:NF017116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VapE domain-containing protein"
                     /protein_id="HSV26203.1"
                     /translation="MRFTGRRPTLEEIVNLGVPVFPVNIWWDTKKQKWQKTPAISKKN
                     GGHGHRDAVKGEAARALFARAVDERGRPRWNSVGVPTGAVLGATVVDDDPRKGTAPWL
                     ADHRLGGTRRHTTWSHGSHWFFKYEPGLKTGSDRPVRGIDIRNDGGWVVWWPVHDGPI
                     ENAGVLAELPPWFVEQCHAASAAGGGQDRTTKSSPGGENGGASELLTRLGTPPAHIGG
                     TTGIDASRPKLAQRGLATQAPFELVAHNVARVRGALAAIDRTKLGRDEWLALGMSLHS
                     LQWDRSDGSDVGLELWDEFSAPSEHYNFDKLEYTWKSFGMPVEGRRPRTIGTLFDMAH
                     QHGWRGQVVMPPETTVSDAGTGAPAGSFNGAVNGHYALPAVFTAPAAVAGGPIFVDNT
                     TTGAPKATPANARIALRALELSCRHDQFHDKFMVGGRVIEQWTGELTDNAVQVLKGTI
                     HERWKFEPSAEHMYSALMQECLAHSFHPIKDYFDGLVWDGVPRISTWLRDYLSAPDDP
                     FTREIGRLALVAAVRRIEEPGCKFDEIIVFESAEGKGKSTTLEILAGTENHSDQEILT
                     LSDRAQQEQLQGVWLYEIGELAGLRRADVERVKLFASRRSDRARPAYGRMRVDRPRQC
                     VFFGTTNDSKYLTSQTGNRRFWPIRTGKVNLDGLRRVRDQLWAEAVELEATGMSLRLP
                     EALWADAAHAQDARMVHDPWIDLLADIASREKHCYPLADGTGRQELRVTSKTLYVHYL
                     GLTAEKLNVPASKRLAFVMEKLGWHGPTPKWVDGKTQNAYTKLVEP"
     gene            40193..40510
                     /locus_tag="VLJ17_24670"
     CDS             40193..40510
                     /locus_tag="VLJ17_24670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26204.1"
                     /translation="MSLCGLAQHVFKRPRGAPGPCPALEHGDHETQCGLVANPQHYVK
                     SISKADAAVRATAAKYLIGAGLGCTAVFNGEPRDEVFDRMITMRALGGAMRAAMRAWG
                     LVV"
     gene            40614..40886
                     /locus_tag="VLJ17_24675"
     CDS             40614..40886
                     /locus_tag="VLJ17_24675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26205.1"
                     /translation="MKKPGRRRRYTNAPPMHQWTDWDRRTYDALTTAYGRTRFCLRCG
                     LRMYQGGIHRYIGYWTIPNTFYYINGWQRFNRLPHVCAPLEPPIGA"
     gene            41174..41557
                     /locus_tag="VLJ17_24680"
     CDS             41174..41557
                     /locus_tag="VLJ17_24680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26206.1"
                     /translation="MIYKSETPLFCRCCGKHIRKHTEREYVKQSRGEHDRALGRVHYG
                     TFRNKAECEVATPDKVISIRYGNDCILSFTTWDRVSYVDRYFCTKKCAIRFAHHYAAL
                     DAGMPAFRQRLENTPRVGGRRRVAL"
     gene            41656..41904
                     /locus_tag="VLJ17_24685"
     CDS             41656..41904
                     /locus_tag="VLJ17_24685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26207.1"
                     /translation="MFAAVLCLTLAIVVLGACVLGLSMRLQRLEDVFARALNHWPPGN
                     GSLSGQQQARMIEDLDAENWGNISKAERDRIRMRMPND"
     gene            41897..42199
                     /locus_tag="VLJ17_24690"
     CDS             41897..42199
                     /locus_tag="VLJ17_24690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26208.1"
                     /translation="MTDPVQIHHVQMFCCNKCGDIHLNGIAEDVKTVVARLQMEPSAA
                     LNIGAYLIGLALAMTGGSTMIVEAVPLIPTPTSVVELQEMTGHIITGENDGGETKH"
     gene            42183..42404
                     /locus_tag="VLJ17_24695"
     CDS             42183..42404
                     /locus_tag="VLJ17_24695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26209.1"
                     /translation="MKRNISGVDYDVISPSFYVRYEPNMRIMFMYNGYGEWVTYINNE
                     PVGLDLTLEAAGDAVAAGLHNYSPPKRAS"
     gene            42487..42732
                     /locus_tag="VLJ17_24700"
     CDS             42487..42732
                     /locus_tag="VLJ17_24700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26210.1"
                     /translation="MATKHYHIVAGRVRYRVVFRGATPFAVFVKYHRTFPRGRDGWVE
                     RVIWHSYDRKCPPAATFAIQAAKKVRNEQKRKITVAA"
     gene            42698..42970
                     /locus_tag="VLJ17_24705"
     CDS             42698..42970
                     /locus_tag="VLJ17_24705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26211.1"
                     /translation="MSKSAKSLSLRECAEAKAWRTSRALTIKKLAELTGFSCEAIMLF
                     EKGKLPNGRPIKTEAWVRYRHICGSIDILLRSGAMFRWGDTWQTGS"
     gene            43179..43985
                     /locus_tag="VLJ17_24710"
     CDS             43179..43985
                     /locus_tag="VLJ17_24710"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSV26212.1"
                     /translation="MRVLIIDPLADPRASSAASTLVHVSKLQQMLKAWRLDAKSDLAI
                     NMGDVDSYMRLYKYNVVLICDNDDTRRYINNARHCDPRVAIIVLSQVSDNLVACLGWG
                     ADDYRVTPVIAEELVARMKTIVLRHRGYDQHVVQCGPIRLDFDTQRWLVPEWRGNLLE
                     EYAPVHLMPALWKVLECLVLRAGEVCTRTDILEHLYGTGSGEHDIEAIDVFIYHLRKK
                     FAVAGIPANTIESSWGRGYRINPLANGPAIPKARGGRPRKRKIEQMQAAE"
     gene            43989..45884
                     /locus_tag="VLJ17_24715"
     CDS             43989..45884
                     /locus_tag="VLJ17_24715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26213.1"
                     /translation="MRFVVLDFETYFDDEYTLRKMTTEAYIRDPRFEAHGAAIKWQAN
                     IPARWYDEKELRYVFKQEDWSDIILCAHHAHFDGLILNHHYDVRPRKWCCTLAIARQI
                     LGNHLSVSLDSVRRHFGMPSKSTPYGLFKGRHWNELDRTTQQQVGDGACDEVESIWRL
                     FGMFSKSFPPDQYEYIDTTIRMFTQPMLRADIDLLAKIWQDENNAKHARMASLGVSVD
                     QLQSADKFAELLRKEGIEPETKTSPKGNEIYAFAKNDEFMYGLLDDSNERVRALAEAR
                     LGAKSTIMQTRAETYGFMAQRGPLCVYLKPYGADTMRPSGGDKGNFLNLKRPDPDNPK
                     AGSPIRKSLMAPEGYLLAPVDLSQGEFRIGAYVAEHHELLEKLRVGVDPYIDIASKFY
                     HEQIYKPKSGDPREIEMKQKRGCGKQAMLMCQYGCAAPKFQKTAAAGLYGPSVDMSID
                     EAERFVNLYRDENYPVVNYWKTGGRMLSRLAGGPPLDWGPLHIKDKRLYAPNGLYLHF
                     ETLEYHRPTQEEIDELDLPRYKWDGFWRVKTRNGWKEIWGSKLLQNICEFLQQCVVVE
                     AMNRITRRGYRVLNHPYDELLCLVPKDGREEKHLEILIAEMKQAPSWLPNIPLDAEGS
                     LGERYDK"
     gene            45894..46022
                     /locus_tag="VLJ17_24720"
     CDS             45894..46022
                     /locus_tag="VLJ17_24720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26214.1"
                     /translation="MELEHISFVSSWWLMLCIICAMCFIMFLEKMGISIGFKSKDQ"
     gene            46169..46606
                     /locus_tag="VLJ17_24725"
     CDS             46169..46606
                     /locus_tag="VLJ17_24725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26215.1"
                     /translation="MRRKTDVASIDAKIKKWNSRLKRAVNAIAKLELQKKRLLRPTRK
                     PGTPVIVKTKVDPLPASLAQEYRTTADDLDVPAFLKRSKDETAKAEIQEQQAEKKRQK
                     TAGRIAKLKADKAGERKQMPLSGKDALAYIKGAMARGEKIKAA"
     gene            46674..46850
                     /locus_tag="VLJ17_24730"
     CDS             46674..46850
                     /locus_tag="VLJ17_24730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26216.1"
                     /translation="MQLPPIVWVLCVAVSLALLMWIMLAFMSRPIETNMSAIAGAAAA
                     AAVADNTRRPLVVR"
     gene            46930..47103
                     /locus_tag="VLJ17_24735"
     CDS             46930..47103
                     /locus_tag="VLJ17_24735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26217.1"
                     /translation="MAKKRMGAPIKFTRNKQVRAKVMFAKGLTSVEVAGRLDLSYATI
                     QAWRKKGMRLRKD"
     gene            47270..47473
                     /locus_tag="VLJ17_24740"
     CDS             47270..47473
                     /locus_tag="VLJ17_24740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26218.1"
                     /translation="MTPISPKTHQSAVQKTVIMVDAVTLLTSIQHLDQEATSVFMSAL
                     GAFQALKPVQRTQIAYALHQLFP"
     gene            47651..48004
                     /locus_tag="VLJ17_24745"
     CDS             47651..48004
                     /locus_tag="VLJ17_24745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="MazG-like family protein"
                     /protein_id="HSV26219.1"
                     /translation="MPSFKEFSRANLKRCESAKGFKHSLYKWDVNKWFVAIMGELGEA
                     ANVVKKLNREEDGIVGNKQTDVELQLKLRHEMADAFIYLDLTAQRLGFNIFDAAVEVF
                     DNKSAEIGYPVRLKK"
     gene            48001..48690
                     /locus_tag="VLJ17_24750"
     CDS             48001..48690
                     /locus_tag="VLJ17_24750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26220.1"
                     /translation="MTYQLPIGSYSMLNTADICLWQMFRRYIVKDIPFVESKEVKHGN
                     KTHTAFEHRLGSKKKPLPPDMQQWEKWCAPLDPYSPEVEQWFGLRRDGLPTASRNADC
                     YFRGKVDCFIFDPKTFRSAMIFDWKTGKVREQPFELETSALFIKAKYPQLEKITGRYV
                     WLKDDRMGQPYDLSNARSTWDTVHHKMTDIERRLMQGPQAFEKMPGPLCGWCSVFDCE
                     HNTNPNRGEQK"
     gene            complement(48691..49032)
                     /locus_tag="VLJ17_24755"
     CDS             complement(48691..49032)
                     /locus_tag="VLJ17_24755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26221.1"
                     /translation="MEQIESVFKTRLFLTDGPFEQEGLLDTISWRGKLWLVRRWRAGE
                     TEGYRQPMWLVRPLLASFERPTFPQWGENYVLIERVPNTILDGRVESGDTERFEVVAD
                     PPIETRLPTVQ"
     gene            49031..49387
                     /locus_tag="VLJ17_24760"
     CDS             49031..49387
                     /locus_tag="VLJ17_24760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26222.1"
                     /translation="MLTPENRVKNKVRDYLKSIGAYCFSPVQMGYGSRTLDLLTAIPV
                     IVHSEVGELRTAIFLAIEVKRKGGKLTPFQNKIIRDIQDLGAHAIWGDDAAVIIRQIE
                     SLRAHFNGRLVLRLPK"
     gene            49356..50972
                     /locus_tag="VLJ17_24765"
     CDS             49356..50972
                     /locus_tag="VLJ17_24765"
                     /inference="COORDINATES: protein motif:HMM:NF012403.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HSV26223.1"
                     /translation="MAGWFYDSQNKILLYERSEQITHWIPDAKEVGAYVGIPRTLRNC
                     QLLRWLNYPVSPIIDNYDWPIQPGRDPLPHQKLIANFQVLHPRCFNLSDPGTMKTLSS
                     LWAADWLMRQFPPGECRAIVVCPLTILESVWAKTIFANFLDKRTFEVLHGTPEQRLKK
                     LAKPADFYLVNFDGINIGARFGQRSELHLDGFAKNLRERSDIKICIIDEARGYSDAST
                     KRHRVAREIIGWREYLWELTGTPTPNAPTDAYGLAKLLNNAFGKSYGVFEKETMYPLG
                     PYKLKPRPDGYERARQLLVPAIRIPIEWVWTGPGMTTQKWEVPLTTEQTKLMKELKRD
                     LQIQLKKGEPITAVNEAAVRTKFLQLSMGAVYDTEHKIHLIDAAPRIKTLETIIESTQ
                     RKVLIFVPLTSVIDLLYKRLSKKWADSANGWFGDVINGQVAQKDRMPIIQKFESDPQF
                     KWILLDPQSTAHGINEMVCADTVVWYGCTDKGELYTQGNLRAHRPGQKHPVTIFQLVS
                     NPLEQEIFDRLDARQSLQGSLLKMIEEGKL"
     gene            50969..51202
                     /locus_tag="VLJ17_24770"
     CDS             50969..51202
                     /locus_tag="VLJ17_24770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26224.1"
                     /translation="MKKVVVKQDPEKEIPTEILANDISDIANGVRAVLGGRLNRRALV
                     LLIQANCVGKISIVTINNVINSIESLDKAYLRK"
     gene            51199..51612
                     /locus_tag="VLJ17_24775"
     CDS             51199..51612
                     /locus_tag="VLJ17_24775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26225.1"
                     /translation="MNERAADPIADLISEWRTIDDFVKAETKRFGEHMAPARERLKSI
                     ETQLHQFLLDNKIESISKKGLGTAYISELMDPKVENVDATLDWALENYDAVGPDFIKV
                     SPKIEAIRSYMADHDNQTPPGITVSYYRRVNVRRT"
     gene            52047..53255
                     /locus_tag="VLJ17_24780"
     CDS             52047..53255
                     /locus_tag="VLJ17_24780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26226.1"
                     /translation="MMTDQLPAYIKQRDPSSVSLARRGLQNVGAGSPPYLSIEGGRFT
                     LIDAGQNAIPIQNPYIDVVVVDLNDHVSKVWFGEAYDPSNPAPPRCFSDNGKAPSQLA
                     SEPQSPTCASCAFNKWGSKISQFGSEVKECADHQKIALVVPGFPGYCFLLRIPGGSFK
                     NWRAYLAKFERAPFDVFDVLTRITFDVSERKTGVLAFQGAGYLDPALAQEVGQVVGSG
                     KTDMLVGRTDTPILLALQGPPAQGQVTYQPQAPTQQPFQQAGIQGMPAQQPQFASQQP
                     FQQTPQTNGQQPPQAPQRARRGRKPAAQQPGPGAQAPFQQPQAPAQQPFKQTQPAQQP
                     AYQPQQPFQPAQQPFQQPQAPAQQPFQQAQQPGPQPGYQQQQPGQTFGFAQGNPPPND
                     MMDAIKQTFG"
     gene            complement(53252..53692)
                     /locus_tag="VLJ17_24785"
     CDS             complement(53252..53692)
                     /locus_tag="VLJ17_24785"
                     /inference="COORDINATES: protein motif:HMM:NF024784.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HSV26227.1"
                     /translation="MLYRVDAFDPNSWALDEPHEFRIYGDDDAQTWAIVDEIDYHHFV
                     RWRWNPKPNKCGALYLRRAAGGARRKDEPRDPVYTLYLHVEIMVRTGISRPSDKHALV
                     DHKNGNSLDCRRENLRWVTPRENRLNRYGNQFRYTPLGGRASLV"
     gene            complement(54408..55130)
                     /locus_tag="VLJ17_24790"
     CDS             complement(54408..55130)
                     /locus_tag="VLJ17_24790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26228.1"
                     /translation="MAKVGHLGVGSHSRRYTRRSPHSFAVMEIARRTWGWGRALVMPH
                     LNTALFINLPLRLVCVSGHFVFGLVAGFVALCFWWVVLDRDVPVELISGTIEPNPVVP
                     GGTVKIRMRFKEHRICPGNIERRIIDNSGEVHTYVGTNTIYVTETPADEVTIDREFAI
                     PSSIHPGVWSYAPNIEWYCNLGQRWFNAPIRVNQKGIQFEVQGVPPALQEQLDTKQQK
                     HLEYIPLPRSNPRIEHIAHATN"
     gene            complement(55228..55509)
                     /locus_tag="VLJ17_24795"
     CDS             complement(55228..55509)
                     /locus_tag="VLJ17_24795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26229.1"
                     /translation="MTAIVLDSTQLATMFKALPTVIDDIRAGKAPLDVFRDVEPSLLP
                     IFETIAGDLFPFGGLAVDVVALAVLNSKQLSPGEQKIYDDAYSARVQAT"
     gene            complement(55724..56638)
                     /locus_tag="VLJ17_24800"
     CDS             complement(55724..56638)
                     /locus_tag="VLJ17_24800"
                     /inference="COORDINATES: protein motif:HMM:NF017638.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase 108 family protein"
                     /protein_id="HSV26230.1"
                     /translation="MTTRFDLCLPFVLAQEQNVVGQWSNPKNFDNDPHDPGGKTWNGI
                     IQREYDIYRKHLGLPTQDVREMTEVEGSQIYLTFFWQPYCDRLRPGLDLQLFDAAVNE
                     GTTESIRILQVALGVKNDGKWGPITAAVAANTDLIAAIKAFTARRHEVYKETKGDQYF
                     DKDWQRRTDEIGTEALKMAESGTPVQPPKIVYTQAPKTGAPSMTTTITLPTPSVSGIA
                     GALAGSKTYIGLAIGAAVVIANHFGFLPTAIAVPGLNPNNWLSDLWYLYLGAAGRSAL
                     NTTVGGIIGALFPASPAVATPAPTPPAS"
     gene            complement(56653..58770)
                     /locus_tag="VLJ17_24805"
     CDS             complement(56653..58770)
                     /locus_tag="VLJ17_24805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26231.1"
                     /translation="MVMPIAISRQRLLLGLLAAPTLILPEREATAWGVHGSTAGTIAL
                     IDFTNNPVFQRTAGQTTGPVYVSGTYTGPNPNPQGQLRKISDNSVVVAWTNLTNLTQG
                     SGFFQGSIPGAPQGVDMKAEVRRGDNNSVSSAGTGTVRVGACCLMYGQSNMSVLSTQT
                     NGSPPSAASGTSCFQGNKGSSSAWVAVPAANGIRQLLNNLNSLLGIAVAAIDLSVVGA
                     DIGFLSGSNWANVVNNLNAMNVNGDFELLFFNQGENNAQSVPPNQFENEWVGDLQLIQ
                     SQALSQTGRSSAQLPIIVSSLATLKSPNTPSGGPWWAETQQYIYDAGTQAPNITYSHT
                     DIFAALGADGLHMTGADCDKVGQMFAQTAGVIAGATSNYPHWYITSATLTDATHTTVG
                     LTHSMGTDFTPTSGITGFEVSGDGGATWLTPSAAVRTNATTITLTHSSLQTSQRLVRY
                     AYGTQPNVSSPIIDNSSIGVPLNYTPYWITCASPSIPVPTFRPPGTKTVFNNSTHICS
                     SVSNLATGDGSVAQTVFLAVMQANTPTGVTLTPYPGGVINPGSAGSGIAMTLAASVSG
                     GCSIWTCQIATGVESCSIAAQYSGVVAASVFDLWTVPTSLLNSATPVASAGKTMTPGD
                     TTDSVTLQTNANGFVIVCAFQEDGAAVFSGTENYARGHHVGLGKAVSAYSAVNASNAS
                     SVVTITMASGASSNDNMLAASFR"
     gene            complement(58771..59697)
                     /locus_tag="VLJ17_24810"
     CDS             complement(58771..59697)
                     /locus_tag="VLJ17_24810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26232.1"
                     /translation="MSIFGTRNFKAALALLGALICVAPAIAQLSTTHAGLGAPGGFSP
                     SCSASTTFLARTSGMNNTEKSAYDGLICGLITDGNGCSAWSGSTGNFDLLYIFATNST
                     TTAALNLCSTSFGLTTNGSPTFTADVGYTGDGSAASLDTGWVPSTNAVNFTQNSASGG
                     VCVLSTRTTSQNWSEYGTEGSSFSNTFGFQPNFTNGNQSRFWLNANSAPASPTSGSSV
                     QAHWIITRTSSSAGVLYKNGVSDGTSSQTSSGLSATSMVILAGRNNGTIALFTNDQIA
                     WVFLGGTLNATQASNINTRFHTFATAMSLAAC"
     gene            complement(59669..60988)
                     /locus_tag="VLJ17_24815"
     CDS             complement(59669..60988)
                     /locus_tag="VLJ17_24815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26233.1"
                     /translation="MAQNLTLPCYSVAPNICQPISTAFGLPVNIVSGTVTASFAGFAP
                     NGNTATLAVTNSSSNVALPAGGGTTIVVYNSGATAATVKLGTSSGVTVTTTTGDVIQA
                     GAAQQYTIGSNTFLAAITASSTTTLVISGGSGLATGWGGASSGGAGGAVTIASGGVAS
                     GAYASGSIASGAMVDLGSQADAVCGSDTGSCSLIALIKRNNVVTDSAIPAGGNTIGKV
                     DILGNVGGVMDFAGQNATAPASALQVGCEFNTTPTTISSGNASPCQLDSAGNLLVNLK
                     TAIPTGSNGIGTVNPTTAANWGIVATGAAPPANAVYLGANASGATGGHVAALIACDSH
                     VFKHITTATDTLAVQGVASQTIRICGWRSRAAGVATWFLENTASANANCASTLTQITG
                     LATEAANTGETMLAPFWTGLANTSGNGLCINSTGTGGVDVDIWYTQF"
     gene            complement(61063..61452)
                     /locus_tag="VLJ17_24820"
     CDS             complement(61063..61452)
                     /locus_tag="VLJ17_24820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26234.1"
                     /translation="MVLDMMRVWGLGLLIIAAIIFVTWLADPALPQTAQPFTHNFSKV
                     IDKGGTFQTVIVPAKNFLRHSILIQNNNSLLHNCWIYVGEGTPAKALSYLLLPGRSYE
                     RSAPFAPINAVSATCDYDKDTLYIEAQ"
     gene            complement(61452..61985)
                     /locus_tag="VLJ17_24825"
     CDS             complement(61452..61985)
                     /locus_tag="VLJ17_24825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26235.1"
                     /translation="MKKFLVVLACCLALWLPVDAKAQSAQYNCNPCTPTHLANWLGTG
                     ILGDAGTSFSAQTQGANASQFAQISVLGIPNLYFDNLVHIRSLGAAPTLTSCGTSPSV
                     SGSDVSGTITMGTGSPTGCTATFAQAYLNAPNCVVTWQTNIASMQYTVTASALTLVQT
                     ATSSNKVNYFCFAGSNG"
     gene            complement(61982..62272)
                     /locus_tag="VLJ17_24830"
     CDS             complement(61982..62272)
                     /locus_tag="VLJ17_24830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26236.1"
                     /translation="MAKTEFKVVEDDDAGPFALKAPPEKQDVVAENMLMLALRALSQR
                     AIAAIADLFTIVTVSSAWWLWASTPDPNVHQIVSLTVYALFVLAVNTIVRKL"
     gene            complement(62238..62489)
                     /locus_tag="VLJ17_24835"
     CDS             complement(62238..62489)
                     /locus_tag="VLJ17_24835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26237.1"
                     /translation="MIEKNLDVQMEEAAKALLKEITTGKGDMTLQEKASAFKVVTAYY
                     ALLRKEPLVSDEDDEDREPTIHELAGSLHGQNGVQSRRG"
     gene            complement(62486..64663)
                     /locus_tag="VLJ17_24840"
     CDS             complement(62486..64663)
                     /locus_tag="VLJ17_24840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26238.1"
                     /translation="MFAPEAPGLKKIEEFDAVFRAQNVFGQAAQEFYEKEATKILENE
                     MLDVSIASPLTRATEKVPSEKAGEAVLAAARKDMAHADAQLENAIRGAREEATLRTTH
                     GLGPEKAQALHAALLENLDSTHKQMTEQAEILIKESLDHLRKDVDSAIKMHDAGENPG
                     ALWKMVGTKFEEFAYAVKIRARRMYNAVDATAGNVLPDTSSLMDDATAFLHGLPQAFR
                     DKYPNEIRTLAKMTETETGAGAQTFAGTEKDFEQITWPQLRQLRSWVRYGIDYNDLTP
                     DIRQGSLIFLEKKINAVLHDKKAPEQLKEAAKMLDRADNFYRQFVPMLDDERIKTVRR
                     ALRAGSGGNPESLARTLFAPDHTEAMFKIREMVGDNYWAQVQNAHTKYLLDQSRTLTP
                     GVYDGQKFASQVQELVRNGLLKNAYDEVTARRLAAMAEDIQSVNGTVPLAAREGSTIQ
                     ELMKTAQVAAQSAKKMADIDPLKMLSQEMQRLDKDYNVKVRKAQGERRAEPLGFLYEE
                     KMSGLATAAADKILAKEDTIRAAAQMFGRESPEFKALQQVYAYRFFQRPLGETGKMLE
                     QIGDPKKGITDEVQALMFPGVTRGQMVQLAKDMDFLFSAGGPDVGGSLAAASRVLNPW
                     QHIPLPKLTGVSMILHVPGISFAGRFLLGKVFATIMDGVSHPNFLNWLAGNLKGEPIE
                     REVAKRVLKERMRMGGWFGGTAGQMMQERSRQGQLDMPQAVAQ"
BASE COUNT        14554 a        18577 c        17623 g        14027 t
ORIGIN      
        1 cccggtgctt ccggcgcgaa cacggaaggc gggactttgc ccccacgctc cgcaatgctc
       61 gccgcttgct tcgcgacctc gggagttgtg cccaaaaagt aacgtgcccg atcaggcgag
      121 atgccaaaac tctcaagcac cttcggcaaa ttctctttga cgccctcaat gacgccggtc
      181 gccttgtctt tcgcagcacc aatggcatcc gaggcgcttt tgacgacacc gggcaccttg
      241 gaaagcagat gcccacccgc ttggccgaca gcggaagcag ctgcttcctc gctcatcgac
      301 tccacttgcg tgctcatgtc ttcgtggatg ccggcaagac tgagaacaac gttgttgaac
      361 tgccgccccg ccgcagcacc aagcgtcatg ccgccgaaag cgccggctgc cgttccagcg
      421 ccgggctcta ccgatccacc gacaccaccg agaacaccgc cgcctatgcc acccgcgagc
      481 ggtgctgcat cggacagcac gtgtccaatg gcgcttgtaa caccgcgacc cggcttgcgt
      541 gccacgccgt catcgtcgac ccacaaacca tactcgtctt ctttgacttt atcttcgcca
      601 taagtgcgag caagcgcctg ttttcggcct ttgtcagtca gcgccatctt gtaaagcgta
      661 tcagccgtgg tgctgacacc ttggaactgc tttttcttac ggacctcgcc ctcgggatcg
      721 acgtacgaag cgccatcagg cactttgtcc cacgatgctt tgtcagttac ggcccacggc
      781 ttcgtgcgcg tctgcccggt gggatcgata tagcgatgcc ccgagccgat ttgctcgtag
      841 tcttccgtgc tcgcgacctt cttgggaaaa agtccgatcg tatcgtacgg tgcgtcgtga
      901 gggacggctt gcgggttggc ttcgtcggcc atcagggcga ccccacaaca gggtcgcgca
      961 gccatggcgc gtcgtttttc ttcggcttcg ccttatcgcc gcccgcgcct tcgatttcac
     1021 cttccctgcg ataacgagcg gcgagagctt cgcgtagccg gccgaactcg gccttgagtt
     1081 cctgcatgcg gcggatagtg ttcgcagtgg tgtcgccgaa attcaagccg cggatgatct
     1141 tatcgacctc cgcatgctct gcagagagtg ggcgaccgtt cgcgtcgagc aagagccgcg
     1201 gcgcaatcaa cttcaattcg ctgattgcac tctccaactc tgcgcgatcc gtcgcatttg
     1261 aacccaaaat gtttgaaagc ttttcaccca agcgcgcagc ggcacccggc gcaccaaccg
     1321 gcaacgtgtg cttgttgatc agcgacaaga tcttatcgac tttccccgac gcttcatcaa
     1381 aatgaccgat ctgcgtctcg cccttgacca tctgattgcc agtaataccc gctgcgcccg
     1441 cttgtttggc aaagcgtagt ccttcagcca aggcgttttc ttcatcttta gtcgtccatt
     1501 ccttgccggc gctcgcggct tcttgctgtt tttgcgcgac atgatcgaga acaatcttgc
     1561 gctcgatccc tgccaagcct ttgccgccgg attcgccagt caagtaagcc ggcaagaacg
     1621 accgatggat ctccgcccac cgttccgggg gcgccgtcgg gttcttggca agctccgctt
     1681 ggatcgcaag ctcttctgct gtctctttcg gctgaaaaat ctgtttgtac aactggaatt
     1741 tctcttgcgg agtgccataa aaacgcttgt cggacttgag cacggattga atcatgctcg
     1801 tgccttcatt ttgaaggtcg gcgtccagcg ctttttgcat cccaacgaca gacttgttgc
     1861 gtgcgtcgat cgtctcgaac catttcatgt cgtagccgtg ttcgagcagc gtcaacgcct
     1921 ggatatcccc atagcgcgtc gcagattcct tcatcatttg cgtgccgcgc tcgtaatcgg
     1981 ttttcatcat ctcaagcgct tcttggtact gctcgtgcat catcttcccg cgctcgatcg
     2041 cgagcttcgt gttctcctgc cacgcctgat gtgccagatt gtactcgtgc tctttaccgt
     2101 cgcgcaccgc attcatcgca gcagcagcac cgttcaaggc attttccatt ggcgttttcg
     2161 taaacgcgct cgcggcaata gcgaacacag acgcaaacga tccaaaagct tcaattgggt
     2221 cgtacgcgta cttttgtcgc tcggttcgga tgtcccaagg cttgaggtcg ttgagttgag
     2281 cgccttcggc cttgtgccag tgctgcattt ctgcagaatg ctctgaggca gcccgtttgg
     2341 tagctgcgga aattgcttcg tcacggttga ttttctcacc gagattggac acgccaagcc
     2401 gctgcaaatc gttcggcatc gcgacgagtt cgtcgagcga cttgccggca taaggattcg
     2461 cggaaggcgt cgcgtcgctg acaacttgtg cggcgggttc agccatcgat tatgtcgtcc
     2521 ctcccgcacc aatcgtgatc gaggtgccgg gaattgccgt acgaccggca aggctgcccg
     2581 cgaagttcgc aatcgccttg cccatgttcg ttgcttgcgt ctgatcgatg ccgacaagcg
     2641 tcgtatacaa ctgatcgctc atgcccgccg ctgtttgtcc cgacgacaac aactgcgtcg
     2701 cgagttgacc ttgcgtcgcc gctgcgcgct cgtcgacggc cgcgagatct tgcgcgagcg
     2761 cagagttttg cgaggggtcg gtcgactcgc ctttcgacgc gtaattggaa aggatcgacg
     2821 ctttcgcaga ggcgctcgct tgcgcgacct ccgcggcgag accgggagga agaccgccgc
     2881 ttgtgatata agatgacaac gtattcgctt gagccgcttc ctttgatgcg gcatcctgca
     2941 acgctttctg gtttgccgtc gctttctgcc cttgcaaaat gctgtaaccc aagccggtgg
     3001 cacccgcgag gacgccaagt gggttggacg tgagagactt cgcagcgccc gatccgagcg
     3061 tccccaaggg atcgtgcatc aacgactcta acggatttgg agtcgcggca gcaggcgtca
     3121 ctgcgggggc tgcgccagcg gcaggagcgg cgaccggcgt gaacgatgtt cctgaacccg
     3181 cggccgtggg aaagccggga gcgcctgccg cttgcacacc ttgtccagca ccagctgttg
     3241 cagtcgacga caaatcaaca ggactggcac cgaccggcgc gagcggagcg gcagccgcat
     3301 tggcaacagg cgccgcaccc gacgcggcat cggggaacgt gccagaacca gcaggagcgc
     3361 ctgtcgccgc atcagttgca ctccatcctg tccaattcat gggattaaga gagccgtcac
     3421 cggcagaggc aataggcatg ccgccgatcg tgccgggaac atcggcagcc cccgtcgtca
     3481 acccttgagc gaagccggca gtagggttgg cacccagcgc gaaattgcca cctgtggcgc
     3541 tgccgatatc agcgaacggc gtactggcag cggcagcatc aggagtgagc gcagaaagcc
     3601 cttcagcggc cccaaaaccg gccgcagcgc cgcccaatgc aggcgcgaga cccaaacctg
     3661 ccgccgctgg agcggcagca gcggcgcctc ctagagcagt ggccccagta gccgcaccgc
     3721 ctcctgcgag caagcttccc aaacctgcaa tggcttcgcc aataccgagg tcgggcatgt
     3781 ctaacactcc attaaacaaa aatttactta agcactcaac ttttcctgtt ggatctctga
     3841 cggatcaatt tcgtacgtca tggcaatggg ccggtagccc atcttctcca gcatgcgccc
     3901 attggacgcc tttgggttcg tctcgatcct aacacgtttt gcgccggccg cacagagcct
     3961 tagcgccgct tgttcgagca tcgctttctg tatgaacact cggcccgccc catcctcgac
     4021 gtaataggtc gggatggtgc cgatcatcat gccgaccgag ttggggtgct ggtgatacac
     4081 accgacggca tagccgatcg gccggccggg cgactgatcg tctctcggcg atggctcatc
     4141 gtccgactcc cgctcgtaaa caatcaggac gaacaagcta ccgcgttcct ccattgcccg
     4201 atacaaattg aaatcgggcg cgagcggcac actgttatcg ccggtctccg catattggcg
     4261 cgcaagcatc tgctcgatgc atttgcgcgc tacgtcatgc ggttctttct tgcacgttcg
     4321 cttgctcact cgggtcctct ttcgacaaac cgggacggcg cttggggttg atgtcggcaa
     4381 cgagttggcg aacttccatc acgcgtttgc cgaaaatctt gtcgactgtc tccatcggta
     4441 cgtcgctatg ctgcaagacg atgatcttgg tcgcgccttg attgccggcc caacgcacca
     4501 tctcgccgta gaagtccgcg gcctccgcga tgtgctcttc gttgttcgga ttttccgcga
     4561 agacgaagcg ctccatgatg accggagtcg gctcgaacat ggtcgtacga atgacttgcg
     4621 ccaaaccgac ggcatgcggc atgaacagaa acaggaactc ggggctgtac agctggttgc
     4681 gaagaaaact gtcgacggcg taagccgtca tgtgcgggca aattttcacg atccgatcgc
     4741 gcagccacag atgccgattg aaatcggcaa gctcgaaccg ccgcacaagc ggacgctcga
     4801 ccttcggcgc tgcgttgaac ccctcagagg gggcaagttt cgtttgtgcc acggcgttct
     4861 cctaggctat aagcagttga ttagcccact ggaaatgctc gtttgcgtgc atctgtatcc
     4921 agccggctaa ttgaccttta tctctaaagt cgacgtcggt caaatcaaag cccgacacac
     4981 tcaagatccc gttcgtcgtc gtatgcatct gctgatgctg atataaccac gcacctatgt
     5041 cgttcagagg catcggatcg agcacgaatg acgcgatatt gatgcccgag atctgaaaga
     5101 tcacgcgatt gatatcgacg tgatgcgcag cattgtcgaa gctccactgc gagaactctt
     5161 cgggagtgcc ggggacgttg aagatgccgg caatagccat gtcacgcctt tgccaaaacg
     5221 gcggcaaccg ccgcttgatg cgcttcgaat gctttcatct cggcagcacg tgcgtcgctg
     5281 gctgctttgt cggcagcatc ccgttcggcc ttcctccgat tttccaacca agctttgaac
     5341 atcttgtact tctggaaatt cggaaacgcc gcgctcaact cctcatcagt cggcttgtga
     5401 tcaaaatcga tctcatcagc cgctttttcg atcgtcggct gtagcaaaaa atgacccggc
     5461 gcaacccacg gcggttcctc accgacgaat tgcggatgct cgtcgatgta aagccggcgt
     5521 ccgtcaagcc cgcgcttgtc gcgattgtcg atcacataaa tagacgcatc acgaaacgca
     5581 atgtgatcgc cggcatctcg atagagataa cgttgcttaa ttgtcatata ttatcttccc
     5641 agccttggat gaaaactaca ccgcctgtac tcgcccactg gattgaagcc gcttctaaca
     5701 ccactgaaga aggaacagtc atatctgcgt tggcagcagc agcttgcaaa ttgaaattcg
     5761 gcgcgtttgt tgtagagcct gaacctccat aattggcgtt ggctgctact ataatcgaag
     5821 ctgcgcttgc aacttgcacg tttaagaaaa gacagctagc ggtcgtaggt gcaaaattcg
     5881 tagttgccaa tgaaacaaaa gttggtgtcg caggagtacc agccgtgccg gtcgcaataa
     5941 tcggcaatgc agccgtgttt gtcgccgtcg tgaccacgta ttgggcgcgc cgaccttttt
     6001 gcaaaatgcg caaaaaatta tgcgagccat ccgtgcggaa tgcacccagt cgcgaaaatt
     6061 gcgtgaaccc gctcggcagc gttggtgacg taaaactaag tgaaatcaat ccagcggtcg
     6121 tcagcgtcgt cggattgtaa atgacataaa cagcatacca tgacgaattc gcaatcgacc
     6181 cggtatcgag accattcgca ccagatgtag cggaactgat cgtgacgttg actgtcaata
     6241 acgtcgtaaa attcgccgac ccatcagaaa cagcaacaga atcggcagtc aacgtgattt
     6301 gtgtattcgg cgtgccacca ttctgaataa cgagattttt aaaagcggat tgaacagcgc
     6361 cagccgttgc agcggatgaa ccggggttga gaacgaccca cccgccggca ctggaattca
     6421 aagcttgatt gaaaacgacg taataagtat tgccgatcag aaaatcattt gcaccaatga
     6481 gcgccgcacc attcgccttg tagacgttca atgccgcgag accgccgacc tgcaacgtaa
     6541 ccgggctcgt cgtcgtgttg gcaacagctt gaaaaccaaa aacaggggcg ttgttcgtat
     6601 acgccgagat cgtgggaaaa ttggcaagcg gcgttaatgt aaccgcgtta gtgccagtag
     6661 cagtgcaagg aatcgtcaaa cctgcgccga ccgcagcgaa attggaatcc agatttggcg
     6721 tatccaattc cgtggcgttg gcaaaaataa agggaaggct catgctaacc cctgtattgc
     6781 acgatttctt cttgcatcat cagagaccag agatcgagac tgggttctgt cgtctgcaaa
     6841 gtgatgccgg taaccgcgcc gacctccgcc acttcctgtc cgccgaacgc gtagacaccg
     6901 ccaagaacag atttcgtcaa aatcgtcgtg ccagaagcgt tcttgaccgg gatgattttc
     6961 ttcgatgcgt tcttgacaac aatcgtattc agcggcgatg tatacgagat aaaattcgac
     7021 gtctgatcgg tatcgatgct gacctgaaac gtgatcggcg acgtcttttg aaaattgagc
     7081 aaggcccaga ggcgcgaagg cgctttctcg aactgatagc cgccgggctc cgcccaaaat
     7141 ttcgtctgaa cagccttcat aaaactcgca gacggcgtct gaaacaaggg atagacgttc
     7201 aatccgtctg ttccataagc agtcaacacc gagttgattt cttggtgctg gatataaagc
     7261 aggctgatgc tttgcggaga cgaccaccaa atcttgccgt tccaaatcag caatttgttg
     7321 ccggtcgcat tggttacggg atcgacgatc ggcagcaaga gcatccaaat cttcttgccg
     7381 aaaagaatat gcttggccga actcgggaga aacccggcaa aaccgggcac ggtctgataa
     7441 acgccatcaa gcggctcgct aattttggta acagcagcac catagctcac atgcgcgccg
     7501 aacgggttgg cgaacacgat gttgcgcgac cacgtgtcga tcgcaagcgg ccaattcgtg
     7561 ccgacctcgg gatcggcgtt ctgatttgta aacgttgtgc tcggcggcga gcccgccgtc
     7621 tgcacaccac tgatataatt gatcgaggaa tcgccaatga gatacagaaa cccgttcgtc
     7681 tgcaacaatt tggtgtagcc tacacgtaag aagctgtcga cggacaccgt ttgaccgcca
     7741 cctgatgacg tcgagaaatt cgtgatcgat cccggcgcag aaaatgtcaa caacgcgcca
     7801 ttaatgatcc acacacgacc cgcgaacgtc tcgacatcgg tgccattgat gccgaacggc
     7861 atcaatgtga cggttgctgc agcaccagac cctgtcgagt ccgagaaatt gacggtcaac
     7921 gtgtccgtcg cgagatagcc cgagccggga ttgacgactg tgattttcgt gatcaaaccg
     7981 ccggaaaccg tcgccgccag cgaaatgccg ctaccggaac cgccggacac ggtgacgatc
     8041 ggattactat agttgctgcc gggattcgtg atgacgactt gcggcgagat cccgcccgcg
     8101 gtgtagatgt tcgtaccatc ccagagccaa tagccgttgg tctggttagc gacgatgatc
     8161 acatattgag agccccactg cgacataccc acattggtct gcgccgggtt tttgatcgtc
     8221 gtgatcggca gcatttgagt ttgaacttta gtagtcgtat tgacttgcca aacgctgcca
     8281 tcattgagga acgacaccat gatcggcgcc gcaccaatgt tagcaaaatc aaaaaacgaa
     8341 atttgcgcgc cggtaggcga cgtccacaat ttcgttccga tgtctggcat cacccgcaaa
     8401 agcttgggtc cgagcggcat ccaaccgtcg caccagaaga gttgcttggg atcgacaccg
     8461 tagcgcgacg tcgatgtatt gatgcccatg aactcttcgc aaatgatcgg cggaggaccc
     8521 ggcgggagat atgtatttcc ctgctcttcc gttgcgggct tcggtttgat cgtcatcaga
     8581 atctcccgta gggattcacg acgcgaccgc gacgcgcagc aacggaataa gtcaacgtct
     8641 gctctttgaa caactcaaga tacatcttcg caatattgaa attctgaatt tcgagatacg
     8701 cgagatgcgc ggcgaagtat ggaaccgcat cggtccatgg tcccggcaac gcttcgacat
     8761 cttgatcagt cgtaagatca gcgggcgtgc acagacaatc aagctcgtac tgataggttt
     8821 gcgacggcaa tggatagacg tagaacgatc ccgccgtgcc ctgtccgaac tgcgacgcga
     8881 atgtcgggac atattgatac tgaaatggat attgccggat gtacgcctga tagatcgaga
     8941 acgcgtagac cggcagcgag tagcgatagt tcgagtagat gatgctgatc gactgaacgc
     9001 gataaacttg ccctgcgccg ggcagcgtcg acaggttaat acccgagaac ggatacactt
     9061 cctgcccttg attgagcacg ttgatcgctt gcgtctgcgg tgttgcaatc gcgcccgtgc
     9121 cagtaggatc agtgatgatc aactgaggct ggaaataacc aaaaccgccg ttctgattgg
     9181 caacattcgt caagacgccg ccttgaaacg tcgcttgcac cgtcgcttga agtccattag
     9241 gaaacggcaa cgcaccgggc ggaaaatcag gaccggaaac ggcgacaacg ggtgcattgg
     9301 aatagccgtg cccgccgttc gtcaccgtcc aattcgtgat cgcgccggca atcggcgtca
     9361 aaaaacgaat acaatcagtc ttcagcgcga tctcgcgccg cgcccgattg atgtacgagt
     9421 tgatatcttc ctctgccaaa tcctgaaagc gcttgtcact gagaaagcgc cggacttgac
     9481 gagaatattc gaagagagcc atcgctatgc tcccgccgct ttggcttgcg cgccgaattt
     9541 cgcggcttgc gacatgtcgc tggcctgctc gaacaacgtg cgcgccacag atgaattcgt
     9601 cgctttgcga gcccgctcca cgaacgtctc gtaatgtcca aaatagcgtt cggcatcggc
     9661 caagcgcgcg ttggtttgcg ctgataacaa cgcgtagtaa gcggcgaaga acggcacggc
     9721 gtccgtgaac agatatggga ttgcttcgat gtcggtatcc gccgcgagcg cttgcggata
     9781 gcaaacgcaa tccacgctca acgtgtattg gatgtcggga ataggatcga taagcaggct
     9841 gccggacaaa accgcagtgc ccgcaccaat gccggtaatc gagcccgtgc cggacccacc
     9901 ttgtccgaac tgagcccagc gaacgggagg acccacttgc ggattagggc tgttcaggtg
     9961 gtaatgatcg aaccattccc atgatcgtac gaacaagaac ttgaggccgg gaccgacgcc
    10021 gatctgctgc ccaacacgcc gcacattcaa cgtgccctga atgccggttt gggcaggact
    10081 gccgccgaat tgaatagcgg aaaaaggata ggagcgcgtg ccgggcaccg tcaaaagcgt
    10141 gccgattgcg cggatcgtct cggtctcgcc ggcaagctgt ccgcgagcgg tgttgatcca
    10201 cgagtcgaga tcagacgtcg cgtaaagcgc tttcgtagcc gccggatttt gcaggaggcg
    10261 ctgagtttga gtttcgtagt acgtcagcac ggcaggtacc tcctgccgtt aaacccgccg
    10321 cagcacaggg ttgttcggcg tggacaactc agcatcgaac acgtgcaagg tcagcgtccc
    10381 atccaagcct ttcgtaagaa aagacgtgcc agaacgcatg gcctgaaccc gagacccttg
    10441 ctcgatcttc gaatccggta tcgagatcgt cttcgtcgat cccgccgccg aattcgcatt
    10501 gtgagtggcc gtaaccactt gcgaactgct gcgtgtgtag gtttcgggca tcaactactc
    10561 tcgttacggc gccggctgga acaacgcgat gtcgttcgtg ccacccatca tcaagccaac
    10621 ggtggcgaga gtgaacgtcg agcccgtacc accagcgccc gagatcggga atgccgcagt
    10681 cggggccgac aaaaacaacc caccgtcata gatcgtaccg acagtcgccg ccgacaccga
    10741 cgtgttcccc ggcgtgatcg caatctgcgc ttggcgcgga cggaacgcga gaccaaggaa
    10801 ctcgggcgag ttcgtgatcg tgccggcaga tgcgccgcca cctgtcgtca tgacaggaga
    10861 aagcgccgtg ccataacccg tgccagggcc ggtaacagta gccgtcaaaa cggtctgcat
    10921 gatgagtgca gcaaccgatg cggtcgcacc agcacccgtc accgagagcg taatcgatga
    10981 caacgaacca ttgaccagcg gagcacccga gttggtgcag agaacgccgg tcaacgagcc
    11041 cgctccggtc agcgagaacg ccacagacgc ttgggtgatg cccgttgcaa tgttcgggtc
    11101 ggtcggattc ggcagaacaa ccggggtcgg cgcagaggga taaccagcgc cggggttgtt
    11161 gaaagtcacg ccggacacgg tgcccgttcg catgccgagc cacgcggtcg ccgggatgcc
    11221 gccaacgccg tttgcgttgt tggctgcggg cggaggcgac gggatgaaca gcatcggagg
    11281 cacaccgtag ccggcgccct gagtaggaac cgccacagtg aacgtgccgg acaccgacag
    11341 ctgcccaccg atgatcggca agaacgtagc agtcgagccc gtgacagcga tggcagtcga
    11401 cgcctgaacg tacgatccgt tgccgtacga cgtgacgaca gcgccgacga ggcaacccgt
    11461 gcggttggcg atgcgaacgt tgaagccgtc agacttgacg tattgaacgg caccgttcca
    11521 agcagtagcc ggtgcaaact gccaaacccc ggtgatagga tcgagaaatt cgaggaccaa
    11581 atacgatccg aggttcacgt accaattgcc ggccgggatc ggcaactctt ggccgggcgc
    11641 gagcgcctgc ttgttgctcg aaaaatcgta cggcgagttt cccagttcgc tgggataaag
    11701 gttctgcggc aacggcaaac caacgccggg acctgaaagc ggagtgggca tactacgtgc
    11761 tcctgattaa aatgccgcgc cgattagaat gaagctccaa gcaggttgta accccagaag
    11821 ccggacgacg acttagcgct gatgaggtcg taaccgacca cgacaacacc ctgttgtccg
    11881 atctgcccga ggggcacgag cgaatagaag ccgctgaaat cgaatgcagc gtcttcactg
    11941 aggtacatcg acgtgtactt gacgttgacg ccgaacacgt tgcccttcgg acagaaatga
    12001 tcggcgaaaa tcggaacgcc tgaaatcacc atgttcggga agctcgaccg aacctgggtg
    12061 ttcatgttgt cgacgtagga cgcgccggga ttgacgaact gcgtttcaat cgcctggaac
    12121 gtgttgttga gggtcgcgta atcgcccggc gccatgacaa cgaacgtcgg cgcttcgcca
    12181 ccggcctgat cggtgacgaa cgcgagcaaa ttcgccatcg actgccgggt aaagccggcg
    12241 gtgccgagtg agaacgtgcc cgagttcagg ttgatgtact gaccctggaa cgcagagttg
    12301 cccggcgcaa ggcgattgat gccgccatag gtcgggaaat tcgttccgtt gtcgaaagcg
    12361 gactggaacg aatccggcag caccggattt gacgagttgt tggtgaacaa cagccgcgcc
    12421 atattctggc gagtaacggc gtacacgtcg ttcatgcgcg ctttgagcag cgagatctcg
    12481 cgatcggtcg cttgaataac ggtttcgccg aaaggcaatg gaaccggcac aacccaatag
    12541 gcaaggttga attggccgtt ttgaatcccc ggcgtaataa cgggggaatt gaagccgcca
    12601 ccataattgg tgaactgccc ttgaaccatc gactgtccct gcatcgggat cgtcacttgg
    12661 ttcagaccgc cagcggcacg ctgcgcgttg ccggtcatgt agaacagcgt gggcgagccg
    12721 aaataaattt gcacgaacag gcgcgggacg aaagcgcggc gagtgactga cgacaactcc
    12781 gtataaagag cgccagcggc gggggcaacg ccaataccgg gaagcggcaa tgtaacctcc
    12841 tactattgtg cgaccacttt ggtcgtcaca tagcgcgact ggcgcgcgtt aattacgcag
    12901 cgcgttggcc gcgcacgtcc atcaatgcat cccgcaccat cttgtcgacg agcggcatgt
    12961 tttcgccttt ggaatcgatg agtttcttga gatcctcttc gtttccttcg gccggcaaat
    13021 ccatgaaatt ccaggcgccc gagcccgagt tgttgagcgg cacagcaggc gggttgtcgc
    13081 gaagccaaac agccgcggca tcacggggat cgaggatgcc tttttcctcc atcaccttct
    13141 tgatgccgtc gatgccggct tgcgtccact tttccttctt gagcgcggcc cacgcggcat
    13201 cctgcatcgc ctgaacagaa gcaagcttcg cgttgttcgc gcgatcctcg cgctctttct
    13261 cgacgtcggt cttcaacgcg gcgatttgat cgtgcagcgg cttcaacagc tgctcgcgag
    13321 cggtctcggc gtcgagttca ggagtagcga cgttgggatc gatcaccttc tgggcctttt
    13381 ggaccagaag ctttgcttgc gggttgctca agagctttgc aacggtcgtc cgcaactgtt
    13441 gattctgaag aaattcgtgt tcagaaatct cgaccttttt atcgaccacg acaaaaatcc
    13501 ttatttaccc ggcgtgctgc cggcgttacc gacgtgcgac aaagtcatcg cacccgactt
    13561 ttcctgcttc ggcagatgtg acttgcgtcc gccgatgtcg atctgctcca taccaacgcg
    13621 aacgatctgc tcgtcgctgg tgggaacgga cttcgtcgag ttctgaaaaa tgttgagatt
    13681 ggacattgcg tcctcctagt aatgtttgcc gcggttgacg ggggtcaagt tctgaacacc
    13741 catcgacgga ttggagcgca gaccgggaag acgcgcgtcg cgactttcaa gctgtgtgaa
    13801 aggagggcgc gtctgatcga acataagctg gtgctcaagt tcgttcgtcg ggagattccc
    13861 ggtgttgcac ttgaaaagag tgtcgcgagt catgctgctc tcgcgggcgg ttgaccagcg
    13921 ccgggttgct gctgttgcga ctggcgcaac gcttgcattt gctggttgtt ctgtgcgttc
    13981 ttctccatct gactctgcag ctggtttctc tcgccagccg gcgtaacaga gcccgacggg
    14041 acgaacttcg tcagcttgcg caacgcatcg ataacggcga cgccagcatc agaagtgggg
    14101 ccaagcagtg ggacgagttc gcccagctgc ttgacgacca accccaaacg ttgaaggccc
    14161 gccgcttcgt agcctctgtt gggagtcccc tgcgtgacag gagacgagcc catgggaggc
    14221 tgctgtccgg ggacgccgga cggcggttgg ccaggagaaa cgccggatgg ggtcatttca
    14281 ggcacggagt tgcctctatg ccttacttgc gccggctgcg ccggccgcga cgatatcgca
    14341 ccatggttgc acctctcggt tagagaacga gggagaaggt actgacgacc tctacctctc
    14401 caatagtaca taaaaatcaa aggcttgcaa taagggcata acgttgtata ttagcttgta
    14461 tcagcatgtg cttcttgcta aagtgatttt catggctcta acaagcgaac tcgcggcaga
    14521 agatcgtttt ctcaccatcg ccgaagcagc cgaagttttt cgcgtcacac cagacacgat
    14581 ctaccgagcg tgcaagcaag cacgtgataa aaagtccggc ttgcgtcact atcgaatagg
    14641 tcgccgcgcc atccgaattc gctacggcga cttgctcgcg ttcactcaga acaacgcgag
    14701 cgcgttccga aacaaagtca aaaaaatcgc accctaggag aacctatgtt ccagctgaca
    14761 atcgtgatgc cgcaatctca aatcacttgg gcgctcacct tcaaggaaga acagaccgcc
    14821 gtcgcagcct tcgcaaaatt caaggacgag cagagcaacc aagtcgagat catcgacgac
    14881 ttcggccaac gcttttacgg cggacgattc aaagacgtga tgatggagga tctcgaacaa
    14941 accaaaacgc tattcatcga tcgtcagctt cgccaatggc acacgcaaat cgatgcacaa
    15001 cgcgctgccg cagccgatcc caaactcaag acagagatga tgcggcgagg gaacggcgga
    15061 caaccaatgt tgacaccgca attcaacagc tagcgacgcc cgccacccgc aagcaacttg
    15121 cgttccatga cgcgctgaac gccctcggga tcgctcttca agagcatctc gatctgcttc
    15181 tgctgcgctt gctgcatctc ttttttctct gctcgcgcgg cttctcggtt cgggaacggc
    15241 aggttgtcca agacgtagtt cggaccaacc acgctgccct tcaatcccgc cataatcagt
    15301 tgcgcgttgt cgtcattgaa aatcggcgat gacgagtggc tgtcaacagt cacgcgccaa
    15361 tcttgcggca agtcggtcag catgaacgca gtgccttcca tatcttccgc gctgacccaa
    15421 tatcgccgct cttcctttgc ttccttaatt tgaagatgaa ggtcggctgc gttggcgcac
    15481 tgacgttcca ccagtaacgc acgatcgcgc agcgttggtg atgccgtttt cagcagcgtc
    15541 gaagcgtgag aaccggcacg cacgccgggc tcgcccatgc cttgcatgat gttgggaaag
    15601 ccgccaagcc aattaatggt ttcgatgagc cacttgatca gaggcagcat ctcgggcggg
    15661 aatttcggcg tgaggtcgtt gacttgaccg ccttgcccaa cgttcatata accggtcgcg
    15721 cggaaccgcg cgaacaactc gtcggtcatc ccgttttcgc tggcgaacgc gaggatctta
    15781 tcgacttgca aaccgaacaa acgtttgaga tcgtcgagcc acgtacccaa cagcccttgc
    15841 ggctctacga gatcaacgag ttcgctgcgc ccccagaacc aattcgtgac gacgtttgct
    15901 tggatcagac gatacggctg aaccatgctg ccttcaactt ctccatgttc atccttgctg
    15961 ccaggaatca acaaattctc atgtttatac agcggagcaa tgatgatatc aggttcaatc
    16021 ataatgaccg tgacgtaatc ggttttcccc tgtacccaca actcgtgagc tttgaccgtg
    16081 ggcgccatca ccgacggtcc catcacggca taattgggat cgttgttgag ttgcacgatg
    16141 ccgccgggca acggtcgcgt gctctgctgc acgccggtct gcaactgcga tgacgacaac
    16201 acctgatgga aaaaactctg cgggtcggca ttgctgttgc cggtcatcgc gtgcgccgca
    16261 atgcgcttgt acatctcttt ggcatttggc aaatgataga tacgacgcca cacttccggc
    16321 atcgtcattg tcgtcgtttc gcacaccgcc ggttgcttgt tgatgtcgtt ttcagactcg
    16381 ttgtagacgc cgaattgcca gggcatgatc aacttggcgt agtacgaagg atgcaaatcc
    16441 ttgccttcgg cctgcaccca ctgcttgagc aaggcagagc catacttcaa tgactcgaac
    16501 acgccttgcc caaacagcaa atccgtgttg ttgcgctccc acgaacgcgt caacgccgca
    16561 ccaacgacct tggcttgctc caatcgcgat tttggatacg ccaattcgta gtcgatcgtg
    16621 aatttcaatt cgaccggact aaacaaatgc gcggctgtgc gctcaagctg aagatgcaga
    16681 aggttcagca gcgatttcgt gccgtccgag cgacctgtct cggcaatcgc gttcatcagc
    16741 ttgcaatagc tcgcacgaag atcaacgctc acgcggcact gttgaatgag ttcgttgact
    16801 tccggcaata atttctttgg gtcggttgaa agttcaatca tcctcgccgc ctataaccgg
    16861 gttgagttgt ttcgtttccg ggacgctcag acacaacgtc cgtcggcaac cccggcaaat
    16921 gctttgccac ctgatgctgg tgataattat gtaatacggt cctcattcta gcaccggcat
    16981 tcggtgccgg ccccgacatg acatcgggcg acagcattgc gccgttcgcc tgaaaaccca
    17041 tcgcgcgatc ggcgttcggc gccgccatag ctcgcgtcac ctcattgttg atcggcatgg
    17101 ccgcaatctc ggcatcccgc cgatcattca gattcgtgat cttgaggccg ctcatatccg
    17161 atgcatcgca gcccgccatc tcggctgccg catgcacgcg ctgctccgaa gccgtctcca
    17221 tatcgcgata aagccgatca ttgctctttg tcgacggcga caagatattc ggcatgacga
    17281 tatcgtcgtc ggcgcgatcg ttacccacat actccccgca ctcaggacaa tgcttcggcc
    17341 attgattttt gtccgaaaac tgccacaaga atttctcttc gcaatgcggg cacttcaaac
    17401 gaacggccat tagcgccgac ctccgaaacg ttgttgcggt tgaaccgtga gacccccgcc
    17461 gcgccagctt tgatacgtcg cctgccgttg cgctatcatg cgggcttgct gctgccgatt
    17521 gaaaaacatg gtcagttggt tttgctggaa caaagcaact tgatcggcaa tcgccatgtt
    17581 ctgccggcga cgctcgccca aacgcgtacg agcttgagta ataaggttgc gccgctcttt
    17641 ctcgtcccag caatgcacgg caaaagccat cgccattgcc cggtcatctt tcatcccatc
    17701 aggcgcttcg atcttatcgc cttggcgagc gatggaattg aactctgcaa tcaaatcgag
    17761 agaacgaata tgcagcatgc cgttctgcac gtagttgcgc agcgtctcca tgaacgacac
    17821 tttgttggcg accgtcgtct tcaaatgata gttgtgtccc ggcgccatcg agtcggcacg
    17881 cgtccaaatg aacgtgcgaa cgttgcgaaa aatatcatac atcccgtcct tgtactcgcg
    17941 cggctgccgg ccattctcca gctggtaccg cagcgtcttc aatgtgcgaa aaacggaatc
    18001 gccgccacct tggagttcaa ggacatagcg aacctgattg gtgccttgcc cgtaccagcc
    18061 caggagagat gccaagacgt aagcaagatg ctgcgtcgtc accagcgttg acgcatactc
    18121 cgcgacctga tccaaaccgt cggcatagca gcgacacact tgaattgatg cgcggtcgtt
    18181 gtcttcgttc tcgccgtgtg cgggatcgca ggaaatgaca tagatgccgc cggtcgtaac
    18241 cggaggctcc cacaccttca actgcaccat cttggaattg ggagcgcgca aaatctcggt
    18301 gtcgacgaac tcgtcacccg tgagatacat gtacgactga tacttagtcg aaacatgcat
    18361 gttcgtctgc tgcgtgagct tctcgggagc gaaaaacgca gcgccggttt gctgaaaagc
    18421 ctcttcctcg gtccacggct gctcttgcac acgcaacgta gatcccgtga actcgggctc
    18481 agcgtcgcct tccttctccg ctgtggggtc catcttgcga cgaacccagg cgagttgctc
    18541 gatcgtaacg tcgtggccgt actgccgctt gacggtcgca atctgatccg cttccttttc
    18601 ggatacgggc ggcacgccgt aacgcaggaa gtcggcatcg tcacgcataa tgacttgaga
    18661 cggcttggac caccaaccca agaacagaca gccgcaatgc ggatctttct tggcgtcgag
    18721 ccacatgtga taccagcgat taaagccacg agccgtcgac tcatagatgt acaaacgatc
    18781 aggattggtg tcggacaatg agttgtcgaa tgcctcaagc ccttcctcat tatcgtacga
    18841 acaaagctcg gacagatgag caaaggcgag acccacggat cggccgagaa caccggaccc
    18901 tttggtcttc ttggtgccgg cgctcatgaa caaaaccttg gagtcgttct tgagcgtaag
    18961 gccggatcgg ttgttcccct tgatccccgg aaacttgagc gtcttcggaa gcgccttgat
    19021 catcacttcc aactcggcgc gcgtctccac cttgttttga tcggtgtcga agacgacggc
    19081 gcccttcaat ccatcgaaga tcccaagcag gaagatcgtc atcgcgcgag cgatcgtcga
    19141 cagccccagc tgtcggctct tgagcacaaa gattttgtgg atgtcgcgtt ctaggcagtc
    19201 gaaaacgagc gtgatgaaac gccgctgccc gtcatacagg cgctcgccca ggcaagtgta
    19261 tcccgtgtcc ttgctataga tatagcaacg gttgagaaac acataaaacg cctgctcgac
    19321 gcgcaagcgt ttatccctgg accatcctgc catggtccag cagcatagag gtaagccccc
    19381 accgtggcaa gggcctttga aatcaacgcc ttagagagac gacttgaact agtttgggag
    19441 gggaacgaca gtcagatacg agaacaggaa gtgagtaccg ctttcctccc actgctcgtc
    19501 ggtgtactcc aggcgcttgc gccgcgcaag gcatagcgct tcctgtcgtt cgagcggagc
    19561 catgccgtta cgacgccgct cggcattgat gcgctcgaaa acgtcttggg tcagttctgc
    19621 gaccattacc gaatctccgg gtttgaaggg gagatcccgt aacactaatt attataaaaa
    19681 tcaacgccaa tgtgggtttt gttgtcgcgc tttcgcgtca agctcggaaa cgacgccctg
    19741 gatacgcgac gtcaacatcg cataaaaatc acccggcgtg atcgtggaat caagaacgag
    19801 aatctcgata ggatgaccgg caccatcagg tggcacaatg acgatcgcac caccgaacga
    19861 agcgccttcg ttatggcgaa tagtcagcgc catcgtctcg aacggaatag caggattctg
    19921 tttctcggcg cgttcaacgc tatccaatgt atcgatggtc ataattgggt ttgatctcat
    19981 cattgacgta tgaagtcacc gacggagcat tagcgcaacg tcgcgctatt tcttcagaaa
    20041 cgcctgcgta gaatgatgtg cgaccgctct tggtccatgt cacagtcatg ccgccaagcg
    20101 aatcgtcata cccaacttta ctaacgtttc cactcgaact aaaaacttcc tgctcccaac
    20161 tcattcgttg tactcccgcg ccttgcccat catcaaatcg aagcagatag gcagcaacac
    20221 ttcgtcggta tcctccaccg tctcatccgc aaacaacaaa aacggaattt tcagaatgcg
    20281 gttgccggga aacaggttac ctcgatggtc cgacctgagc aggataatgc gccgtcgagc
    20341 tttatcatga gaaccgaccg attgaaactc ggcttcacac tcgtccccga aatggacggc
    20401 acgttgcttg tcaacgtaac gctgcttagc aggcacacgg atatgtgcct tgcgatcggg
    20461 atgatccttg aaaaaatgga tatcgtcgac atcgggattg tcagccatac cccatctcgt
    20521 tcagtttttg cttgagaaga ttcaggcaat ttttcatcgc ctgattcaaa gaatcgtcgg
    20581 tcgctgcctt ggcgatgacc gccgcacgtg caagcgactc cgctgctttc gtgacctcat
    20641 cgatcatctg tttttgagcg gtagcacgcg cgccaaactt attgagcgtt gctgcgagcg
    20701 ctttgtcggt ctccgcttcc tcgctttgaa gcgcttgccg gccggcatca gtaatgtagc
    20761 aattatgacg tccggttggg tcttgtgcag acggatgccc tttgagaaaa cccttggaaa
    20821 cgagcgcctc caccggcttc tcccaccggc caatcggcat cataggctcg ccttcggcag
    20881 caatcatgag aacggcgatt tcatcttgcg tcaatgccgg catgacgacc ccatcagctt
    20941 caaacgcgtt aagcagcgct tggtcttccc tgctcagaga cacgttcttt caatgcctcc
    21001 acgatacggt caaacacctg caaccacccc tcattctcca actgattgaa tgtacggtgt
    21061 ttggatgacc agatgatatc actgccgttc catccgatac gataatcacg accgcaccaa
    21121 gaatacggta tccagcactc catgtccata gtcgaagcca tgtgcgccag cgaactctcg
    21181 atcgcgataa ccatatcaag attgtgcaga acaccgaacg tgtcggtgac gtcgcggatg
    21241 tacggcgaca tatccttgat caacatgccg gcgccgacgt tgtgcacatc ctgtgcatcc
    21301 ggccctacct gaagagaata tagctgaatg ccaggaacgc ggtacaactc aagaaaccag
    21361 cgcacgtcaa gtgaacgatg cttatcgatc tcattcttcg ccgatccttt ccattgaatg
    21421 ccgatgtgca acttacgatc cggcactttc cacgacttgt cagcaagcgg cgcgtagatg
    21481 ggcgtgatgt gcttggtctt cctgatcttg taatcgttga gcccgagcgc gtagggcaag
    21541 ctgacgaacg tcgtccagta gtccgcctcg ggaaacgtga acggcgtcgg catgatattg
    21601 atgttgggaa gatgcgcaaa ggcgttcatg aacgtacgaa ccaactcgga ctgcacgccg
    21661 agatgaacgt acgaacaacg tttcaccgtc tcttcgacga aacgcgcgaa cgtcaaggtg
    21721 tcgcctagcc cctggtcggc aacgagcagc aattgcttgc cttcctcgcc gcgccacttg
    21781 ggatagggat aacccatgaa ctgctgcagc tgataacgga aacgcacctc gaacgcgtcg
    21841 aggccggcgg caagctggcg atcgaacagc agcgcgaacg cgtaggccat gccatacgtc
    21901 gtattcgccg gctcgaaatc gagcgccttt ttcgcgtact ccacgccctt cttagtgtcg
    21961 ccaagcgtac cgatgatctg cgaataattg agccacgcgc cggccagcgt gggatcgtag
    22021 tcgagcgcct gcttgacata ctcaagcgct tccgtatcct tgccgatccc atgcaatttc
    22081 caggcaaggt tcgtcagcgc gcgaccgcgc ttatcaccga gatcgctgca ctcaagcgcg
    22141 cggcggaagc aagcgacact ggcatgactg agatcgttgg gagacgggtt gtcgttggcg
    22201 ttgcacccgc actgatagaa cgcctcgccg aacgtgggat cgacgaagca agcggagttg
    22261 aacaactgcc acgcttgcga caggttggtg gaaaatgtct tgtccagggc aaccgaaacg
    22321 ccctgattga acagcttaag tgcagtctgc cggtcgccca tcttcgagga tactccgata
    22381 cttcttacgc aactcgtcgg cgtcacacat gcggtgattg acaatcaccg aatcgatggc
    22441 acttttttca ttccactggt gggtgtactc gttggtatcg acgcgataat gcaaaggctt
    22501 ttcttgccta caccacatgc agacggcttt gattttttca agcaactcgg atttcgtcac
    22561 ctgtaaactc ctgcaagttc cgcttgatca accgtctcac ttgtgtgttg cgaaaaagat
    22621 tgccgctccg atctcgatag ccacgagcat tgagttcacg acgaataaag tcaacagcca
    22681 tttgcgattg gagggattgc acgcaatcca atatctcacg ctctcgcgga tttgcaacca
    22741 agcgcgcggc acgccccacg ccgtcaattt gaaatccgta cggagcttcg ccgccgacat
    22801 gtccaccgtt tgctttcttt gcacgcttcc ccccgctcac tctctcgatg atgcgactgc
    22861 gctccatctg ggcaaaaacc gcaccgatct ggaaaaaagc cgtagacatg gttccgtgaa
    22921 ggactgattc aggacccatg tcgtaaagaa tgagatcgac cttgcgtcgc ttgaattctt
    22981 cggccatctg cagagcgtcg agcgcagtgc gaaacatgcg atcaagcttc gatgcaacga
    23041 tgacatcccc cgccgccaag cattcgagca tgcgcccgcc gttcgggcgc tcgccaagag
    23101 gaatagaccc ggaaacgtca agatcatacc atgtgaccac gtccatcgat ccaatgcctt
    23161 tggccatggc aacagaacga caaatgcgtt cttggtcttc aggagacgta ttcgtctttt
    23221 gttcatgcgt cgatacacgt acataacaat gcatcatgat acgtgccccc acgtcttacg
    23281 atctcgaata tcggcgatcg ttttcaaagt gacattgaac cgtcgcgcaa gattcgtcaa
    23341 gctaggattt cgtaaaagtg ctgttctgat ttgtcgtatt tgccgttcag taaacttcgc
    23401 atttggatga ctagtcccac gcattttcgg tgttacgtca caatgacagc gcgtacacaa
    23461 ccattcgact ttcaaagctt tcgaatgatc aggatgatgc gcgtgtatct ttacgcgccc
    23521 gagtttatcc aatcctggct gtcttccaca acgttggcaa tttttaggac gaatcaactt
    23581 gccgttcgct acagcattat tcgcgcgcga tctagcaagt tcggtaacag gtaaacgttt
    23641 caacggcttt tttaaaacta cgcccaaagc agatgcgcac tcgcgagaac acacaaaacc
    23701 aaatttaggt cgcgacgccc attgactgcg tcttgcttgg cctgcagtca ttttaaaacg
    23761 tcgcttacaa tttccacaaa caccaaacat tgtattgagg ctctcccgga tggatttgaa
    23821 ccaccacgtc acaccggatg ttccgttgga caacaggcga tagcgagtgg agatctccat
    23881 aacctgtcgc gtctaccatt ccgccacggg agaaaataca tgcgacttgc attgccggtt
    23941 ctcggaccgg cgctgcgaac cctcctacac catccctttc tcaatcggag aatctgtagt
    24001 cgttcgcact acagtatccg actttttctc attttgcaac tgccgaagta gccaatgata
    24061 tgtcggcttc aagccgacat gcaaaacggt acgcggtgcc caccccagtt ccttaagaat
    24121 aagtgtgttg tcggaattgc ggccgaaaac gccgacattg ccggcaacgt acttcttgcc
    24181 cacttgcttg tccgcgacat agcaaatggt ctcgatgagt tgattgatcg tcacgagttg
    24241 cgccgatcca atattgagga tctcacggca gtcgctgcgc atcagtcgta cgatcccttc
    24301 gatcgcatcg tcgacataag tgaacgagcg gcgctgatgc ccatcacccc acacctcgat
    24361 ctcgccccac gcaggagctt cggcaacctt gcagcacagc gccatgacgg acttggcgcg
    24421 gtcgccgcga taaggcgcac agggaccgta agtgttgtga agccggccga tgcggatcgt
    24481 cattccgtaa ttgcgagcgt gtgcgagata cagcgcctcc gcaaagagtt tctcgcgagc
    24541 aaatgcgttg ctcgggaaat agccttccgt caaactttcc ctcgctccat cgccctgcgt
    24601 atcgggatag acgcaagcgg acgacgcgaa gaaaatgcgc ttcgctccaa attgcttgca
    24661 ccaatccaac acgttggcgt tgatgcgcga agagttcgcg aggatgtgtg catcgttgtc
    24721 ggaattgccg atatacccca tgcccccgac ctcgccggca agctggtaga cctcgtcagc
    24781 atcggcaaaa atgaatcgtg cttcgctggc gagcaatgaa cgcgtcaaat cgtgacaaag
    24841 aaaactatca caactgacgg gaccgtaatc ctgttgcctg cgactgacac caatgacttg
    24901 atgcccctcg cgcttgagac gattgcagag gtggaagccg agaaagcccc cggctccaag
    24961 aacgacgcac ttcattgcga cctcttagga cgtgagttct ttgacgatcc acatcacgga
    25021 ctgctcaagc gccgtgatgg cgagagcgtt gtagcgtccg gccttgacct tcgcatacaa
    25081 cgcttccatc gtttcggcgt gagacttgat ctcgtcgtga agcgcctttt cctcggtcgt
    25141 caacgcgcga tagcgcggac gaaagcggct cgtcggcatc ttggtatcgt cgctttgacg
    25201 ggcatccggc ttgccttcaa acaggtttgt catctgtcat ttccttcttg cgtttgtacc
    25261 aaggttgaaa ctgcaacaag agttgtggat cgaagcgatc ccacgtgccc tcgaacgtga
    25321 gagcgcgatc gtcgatcgtg aggaatgcgg gcggtttcgt cgtagggaat ttgagcttgt
    25381 tgatgagatc aatagctttc gccgaacttc caaaaacgtg cacggcatat gccacgatcc
    25441 aagaacacat cgcttgcaca ccggcaggat cgtgcgacct cgacgagtag atctgcacgt
    25501 cgaaataatt ggtggcgtta tcgagccatt caagcgcgcc ggggacggga ggatcgggga
    25561 taactctggc gcccagccac cgcgtcttgt agctgtgaat gacgccgtca aaatcaacga
    25621 gtaagatcgg cttcgtggcg acgctggtgg cgggcgcggt agaaatcggc ggtacgtgtc
    25681 ctctccgtgt cggatcggtc aggttgtccg ccatctttct ggtgacgtcg tcgtgtgtca
    25741 cgattgcctg ttcggtcgtc atgcaacgct tcctttactc gttctctcgc cgccaatcta
    25801 cgcagttgga tctcgcgctc ggtttgccgc gtagacaacc agcacttatg attttgcgtg
    25861 cagtagttca gcggcatccg gtcggttttt ccgcagttct gccaacaatt cctcatagtg
    25921 catttgactg gttgtctctt ctcctggtgg gatttctttt gcgtcttcgt ctgcggagtc
    25981 gatgactttc gccaaatcgg agaaagacac caagtcaaaa aacgtttcgt tgtcgacgtg
    26041 agccgtttga acgttcgcat aacagtgctc gatatgctca tcgatgaacg acgcgagagt
    26101 gcgagcattg gtgtaacgcc gccacatgtc aatatacgcg agcagccgcg tgacagccat
    26161 acatttcttg caacgaaacc aaactatttc gtcggccata attattcctt caacggctcc
    26221 acggcaggca acttgtccca atcgaacgag gatgacttgt cccagttctg ctcgtccttg
    26281 acacaaacgg catagaacgt cacgccggga tcgtgcgcaa cgagcttgag cgtgcgatag
    26341 gcaacctgtg cggggacggg gatcgtgata aagggttgat ggggttgctc gggcgggaga
    26401 tcgggaaacg cccgatattt tgtgtagggg tcggtgacct cgatccgccc acctttcttc
    26461 ccgccgctga cgacgagatc gcaggggccg ttgatcggca actcgatcgt cgcccctttc
    26521 tgctttgctt cgtaggcgaa cggaccatag ccttgcgacc acttgagttg ccaattgtca
    26581 gcgacatcgc caatgccgtg gttgctactg acgtaacgcc caccgagagc accgacgtga
    26641 tgcgcgaaga tcgtcgagaa catgccgtcg tgattgagca gggggatgcg cggcgcggtg
    26701 tctatcacgt actcgccgtt atagatggcg ttcaagcgcg caatgtaatt ctcgaacttg
    26761 acgtcgtcgc gaaggacatt gacgggctct ttgacaatgg tcaagccctg ctctttgagc
    26821 ggaggaacct gcccgatcat ctccacatcg gaaggcgtga gcgcgagcga cgcgtaaccc
    26881 tcggacgcga gcacgagatc ctgatgccaa tcggagacga tggcctgatc gagattgcgc
    26941 cacggaaacc aacggccgac atcgacctcc gccagttgca tgaacacctt gcggttctcg
    27001 cgcgtgttgc ctgtgcggaa atatttcaag tgaagctcgg cagcgggacg agagaggatc
    27061 tgcatgccat agccgagatt gtgcatcgcg gcatagccgc tatcgcgctg aaaaagaatg
    27121 cgatcctcgt aggctctcgc gctgacggca cccacttgga atccattgac gtcgcccata
    27181 cgaaacaaag ccatcgtacg atcaaaccaa tcgccgggaa gcaacacgtc gttctcgacg
    27241 atgcccatgt agtcgtagta tttgtgatgg ttgagcatct tcgtgtaagc atacgcaacg
    27301 gccgcgtcgg cgccaccgcg gatgttctga tgcagttcga acacggcgcc gcgatcgatc
    27361 ttttccagca aaggcgcgtt gcgtccgttg ggcgtgacgg aaccgtcgat ccagaataga
    27421 tcgaatctgt cgggttggaa cagcgggacg atggtctgct gcgtcaactc ggggcgatct
    27481 tttgtgagga aagcaatcgc gaccttattc actcgggaat ctccaattcc ggttgatcaa
    27541 gcttgtactt tttgcgcaat gccggcgcgt cgtaccaggg acgccctgtt ttctctgatg
    27601 cctgaaaacc atcagccgct cccgtagatc ttgcgcaact tattgagatc atcaggcgcg
    27661 agatcagccg accctatcaa atcgccgact gcagcatatg aagcgcgata acctttctcg
    27721 tgctcgatca cgacgcccca caacgagacc gtgccgaaaa cgataggcca gttgttatca
    27781 tcgccgttca aatcggttgc aaacaagctt gagccgcgcc agcagcgaaa catcgcgcaa
    27841 taaaagacga cttcctccga ctccttgaac gcgtagacac cctcgcgctc ctcgttgaca
    27901 tcgccggtca cgacgccgct gggctcccat atcgtcttgg aacgaaacgt gctgtgaagc
    27961 cgccactgcg gatcgacctg ccacgcgcga tagccgatta tctcgccggc tctaattccg
    28021 gcgtcttcaa cggctcgctt gggcttgtcg ggatagaggg ctccgaggga gacgaaggat
    28081 gaggtgtgga cggtggcggg ctgggcgaaa agtgaggcga gtccgccggg attggatgca
    28141 cgagcgggat tacggtatgg cgtctgacgg gttctccaat gtttgccatc gaggtctctc
    28201 ctgaattgct cactgagctt gttgaagtgc tgcaacttga aaccgccgga atcgaagagc
    28261 atgatgcact cgtgctcttc gtcgcaccat ttccaatacg ccggaatatc agtgcgtgct
    28321 ctacacttga tctcttcgct gcttagcact tgctgcaaat gcaccgtcgc tttcgacaac
    28381 cccggctgca cgccacgtgg acccggtttc gcgagcgcgc cgagtcggcc gggagcaacg
    28441 atgacgagat cccactgcat catcccgcca tcgccttttc gcaatctgcg atccacgctg
    28501 ccgtcaagtc aggagagaag cagctgaact cgtcatagat tttcttgacg ttggcgagca
    28561 ccgagttttc gcgagggcac gtcgtttgcc acaagcaagt gttgaaatcc tcaatgccgc
    28621 gcataccgtc catctcaagc gcgaggtcgt cgagcaagta atgctggttg cgctcctgat
    28681 agacgaacgg gcgcccgaga tgcacataga ggtcaagcgt ctccatgatg cgctggcaga
    28741 tgagcgacgc gaagatgtcg tgatagcgag tatcctcacc gtcaatgagc ggcatgaaca
    28801 tcgcgggtgc caattcacga acgaaagcgg tgttctgcga attgaagatc gtcatgcaac
    28861 gatgcgggtt gaccacgacg ccggcacgtg ccaactccga tacgttgaga cgcgtagggt
    28921 tggtgacgat gcgctcgacc gcgtcgatat cgggagagcc aagaatcaaa ccgctgacga
    28981 cgccgatctt cgcgtcggtg acgggatgca cggtgaattg ctgagtgatc ctgcgaatgc
    29041 gaaggggata gccgcgctgc accgtcgggg gatcgagcaa ctcgttcgga tcgaaccatt
    29101 gcaggggaga gcgaatctcc aaaccgctga aattatattt acgggggtcg ccgatcgaac
    29161 caaggaatgt gaatgctgca gaatgatcgt acgacatagg gatgttgtcg tcgtcgatca
    29221 tgtagatgat atcggcgccc cacttgaccg cttctaacgt cgcgatgttg cgacgaagca
    29281 tggaattgca gggaagaaac ttgacaacct cccaatcaga tttgcgctgc tgctccaagg
    29341 aataatagaa gccccatccg cccggcaggt cgtcacaaag agcgcggatc tgcgcgctcg
    29401 gcgatttctc gtcacccgcg atgaagatgc cggcgtgagg catgaacttg cgatagaggc
    29461 gcaagacctc ggggaccctg attgtcgtgg tgacgatagc ggtcttcact cggcaacccc
    29521 ttgttgttcg aacgctgcct gcgtctcaac actcggaagc ggggcgggag gtggagaatt
    29581 cacgacgagc cactcgttga gaatgtgaat gatgaggtgg gctctgcgtg ccccttgctt
    29641 cctcgcgacc tgatccaagc gcttcttgag atccataggc aaacggatgg aggtcggcag
    29701 ttctgcaggc ttgcgcgatc gacgagtcat cggggtcctt gaagagaaat agagtgcgga
    29761 cgcgcggggc cggggggctg agaaacacga catccgcact ctttgcgcac cgaagtgcga
    29821 ctcgcgttgg gctaagctcc cacaaagccc aggctgtgta gtgtgttaca ctacagagaa
    29881 aaacgagtca agaaaaaagg ccggcgacat gccggccttc aaaaaataaa cgttgtactt
    29941 tttcgaacgt tagctcgacg ctggcgctga tgtcgtcggg gccggcgcac tcgcgtcaga
    30001 agatgccgaa gccgaagggg tcgaagaggg cgcggatggc gtcggcgata cactcggagc
    30061 cggcgtaggg gccgggggca ggctcgacgc aagcgacgcg gtctgagcgg cgatagcggc
    30121 gttgccggtc tcgatctgct tgttgagatt ctcaatgttc tgcgcggcga cctcgacggc
    30181 attggtgttg ccgttggcga gcgcgtcgcg aagagcctgg atctcggcga taacggcggt
    30241 ggtcagattg gtcgtgtttg tggtgagcgt agcgacgtcc gtggtcagcg tggcgaccgc
    30301 ggcagtgaga tcgtcaaatg cagacatgat tttcgtctcc agttttttca ggaactcaaa
    30361 gatgtgccga agtcgcgtcg gggtgtcgag atggtcccac accgggaaac tccgtttact
    30421 gaggtagatg tgtgcgtagc ataccaatcg gaatgcgtca ataagtactt ccgcggtgaa
    30481 ggttggcaag ctcggcaaaa gaaatatagg ttgtcggttc ctgcatcgcc tgctcgaact
    30541 cgtggtcggc aagcagggcg agcgcggcgc gatgattgtc caattgcgtc tcgatcgtac
    30601 cgagagattc agcggtgtgg ttggcctgtt cctcgacggc gcgagcgaga aaattgggtt
    30661 gctcgggctg gccctttttt gccttcttgc gcttgatgcg cttggcgaga gcacgcatct
    30721 tgtcgacggt attctgacaa gccgactttt tcgtctcgaa ctcctggatt tgacgagtga
    30781 tgctgttgcg taccactgca aacaaatccg tcttggcggg atcgccgccg cgcgtgacga
    30841 tgccgccagc ctccgccatc aaagcggcaa tgacgatacc cacagccgca gagaattgat
    30901 ttccggggtt gtcgtcgacg gtaccatccc ggtcgaagcg ggcgcgcttt tcgtgatcgg
    30961 agaggacgac gtaggatgag tggatctccg caaacgcttc cgatgaacca cccttgtcag
    31021 gatgcgcacg cttggcgcgc tcgcgatagg cgcgtttgat atcatcgtcg gaggcgtcat
    31081 tgctgacacc gaggacgtcg taaggatttc tgtgtttgcg agatacgccc atcgttcctg
    31141 caccatggcg gacaggacta tcgccatacc acagagcagg gtgatgcgga agcaataaaa
    31201 gatgatcatg ggggaagcga caaacaaggg tttgcgcaga attgcggggg tcagatttga
    31261 actgacgacc tccagcttat gaggctggcg agctaccgga ctgctccacc ccgcaccaac
    31321 gtggtgggct taattgcccg tgacgatgac gagaccttcg cgcgtggtga aatggttcgt
    31381 cttgagttcg agatcggaaa aaaggaagag aacagcgaaa gagaaaaaag caaacttgag
    31441 agcgttcatg gtgggtcccc tttgttggaa ataaacgcga cggttgccgc gcagtacgag
    31501 gttattagag acgcaattcg aaaaagtcaa gaagattgtg ggcgcgaagg caaaggtttg
    31561 tgcatgttgc accaatcaaa agcaccgacg tcgggatatt ttgtcgtggc gaccaaagtg
    31621 ttgggcgttg agctaatcac cacgactgtc ggcggatcga tgcgacacgt tccagtcgtg
    31681 cccgaggccg gcggttggaa aaatttacag gtgggacaat aagggccggt gtagctcaat
    31741 ctgaagattg ctcgctggtt tgcttgcctt cgagaaattc ataaaaagcg ctggcatatg
    31801 caacaactgt catgctggac ttgtcatcat aaggaacatg cttgacagcg aattcaagtg
    31861 cttggcgacg agcctcgtaa tccatctgtc catcaagcat gtcgatcctc gttgtgtgct
    31921 gagagaattg ccgtcacctc ggaaagccga aacccctatc ccgcaccctg gcaggcacgt
    31981 tcgcttaggg acttgttgcg ggcgccagca tgccgctacc gatccatccg aggtgacggt
    32041 gggtgggacc caattcttgg gtaccattgg aacgcaaaag aatcaacccc tgcgttccag
    32101 agaaacaacc cacattcaat ggggtgcttc ttgggtctct tgtttggcgg cgcgagccaa
    32161 catacgggct cccctgagag cgtgtgccgg cgaaggcccg taagcaccac cattaggttc
    32221 ggcttcagga tgaatgtgcg cgaagtagcg cttaggaccg tcgttgcgca cgagccacca
    32281 ataattgggg aattcttttt cgatttcggc gatgagtgtt gcgagatcgg tcatggtacc
    32341 tccagacaaa aatagttgct cactagatgc gagttgcgcg cttggatagc gagacccgct
    32401 gccaagcatt gtttctgcgt gggatagaac gtgttgttga ggtagaccga cgagcacatc
    32461 ggcaaagttg attggatgca ttggtcgcac ggcaggggag cgacgcagag aaaaagaatg
    32521 agatgataga gcgtcatgtc gttttacgct ttctgcgctc gcaccattta cgatacagga
    32581 agtagagcgc cactaagaaa aagtcaaggt cggtcatttc agcgcaaatc ctttatttgt
    32641 cgctagtcac cccttcggag gaaagcaagc cgtgcttcgt tttcctcgtg ctctttcacg
    32701 cggtgccatt tcatgagggc gcgagcgtcg ctgagtgcat tgtgcggtgt atccgattgg
    32761 aggtcgccgg actccacgag gacgagcgtg caggggatga tgaacgactt atcgtacgat
    32821 ggaccacaca tcaagcccat gaggtgcgcg aagtcgccgg gccaatcggc gacgatctct
    32881 ttgccggcgt agcgctggag aaaagcacgg agccgatcgc gaaaatgact gaggggttcg
    32941 ggatcttgat tgagatgcgg aagcacgttg tcgatgaccc acgattcgac atagcggtgt
    33001 tttgcgatcg ggagcacacc atagaaatag tcggggctgc tgctcgatac gagcgcaagc
    33061 gaaatgagtt ggccggcgtg tccgttgaac tctgtatcga ggtagagggt cactttttgt
    33121 cttctttcga ttcggggtcc cagataggaa tgtactcgtg cagctgatac gtcttgctgt
    33181 atttttccag caattcaaaa aacgtgttga agtgctcgcg cggcacgaga agacgttggc
    33241 ctctgatggt gacgagcagc attgtagtac ctcgtgctac gtgtaatggt ttcggtagca
    33301 cgagagacta caagaagtca atagtgtagt tccccgtgct acggtatgaa tttgactttt
    33361 tttgggggag gcgtaggttc gggtgaccct gattcagact gaactcggtc cagatggtgc
    33421 ggaaatacca cagtcgcgtg gtaattgggt aacaccgagg aagggctgcc agaatgtcgc
    33481 aggtgagggg tttttgcctt cgatttcgtg tagtcataaa tacgtgtaaa cccgtcccat
    33541 cgaactaaat gagcgaacat aggaggccag catatggcta tctcattgaa aagcttgatt
    33601 gccctgaaca gtcttttaag accgttctag gcatatcgta cgatccgctt tatgcaggtc
    33661 gcacaaagca cttaaccgag ccgcgccccg agcgcggttt tttcgtctct cgaatccgtg
    33721 atgtaacatt ttggccacac aagacgtagt gcaccgaact acaaaacgcg cgcataataa
    33781 gaagagcgcc ccgcgtcccc attcacaact gcgtcatttg cgcaacattc acaaccgaac
    33841 gaataccaag acatggactc cgatcggtgt agttttgcgc cacctaattc cgcctcctaa
    33901 tcgaggctgg atatgtgaat tagtcgcgtt ttttcagcac cgtgctagct atcgaactat
    33961 acaccattgg ttcactggca agtaccaaac accgcaatgg gcaatcacac tggtccttca
    34021 agcactcgac cgacaacaag cacacattga acaccttcgt acgatcctga aagcaacaaa
    34081 aaattagcgc gtaacaatta cactccgagc gctcccacaa agcggaggtg ctcaacatgg
    34141 aatacgttcg tacgatcgca gacacaatca aagtgctcgc gcagctggca gcaatcgtta
    34201 ttgttgtcgg tatgatcttc gcaaaaccgc gacctcagcc cgatatcatc ggcgacttaa
    34261 tctcacaaaa tgtcgtgcaa aaagatttgt cgcggcaccg ttgacaaatc gcgagtgtaa
    34321 ctattacact ccgaatcaaa tctcgcaagg catcgccagc cggtgccttg caatgtgcac
    34381 gaacaaccga cacaccagga gaacaccgtg accaagaaag ctcacaaaaa gtcgcccgca
    34441 ctgacaaccg cacaatacga tcagtttcaa cgcgccttcg actttttcaa caagagcctc
    34501 tttcaatcat ctcttcccca tgcgctgatc acactgcagc gtcatgcaaa aacgcgcggc
    34561 tacttctccc cgaaccgctt caaaggccgc tacgccaaag aacacgcgca cgagatcgca
    34621 atgaaccccg acacatttct atcacggaag gacgttgaaa tcctttcgac cctcgtgcac
    34681 gaaatggtgc acttgtggca gcacgtgcac ggcaagccat ccaagtccca tcacaacaaa
    34741 gagtggggcg ccaagatgaa agagattggc ttgcacccat cagcaacagg cttgcccggc
    34801 ggcaaagaga ccggccaaaa agtcacccac tacattgtca aaggcggatc gtacgaaaaa
    34861 caattcgccg ctctgctcaa aaccaaattc ggcaagctcc gttgggacag tctctcagac
    34921 tctccgaacg cgaagaaaaa gcgcgcgtcg aaaacgaagt tctcttgccc cgtctgcgac
    34981 caaaacgcgt ggggcaaacc cgattgtctg ctcatctgtg gcgtatgcca cgaagcagac
    35041 gaagacgaga ttgtggtgat gatcccacaa gcacccgaag gggaggacga ctaatgaaca
    35101 tcgaacgcat acagcgcaaa gcccacgagc gcggtctgtc ggtccccttg cgctatcccg
    35161 tcgagaacat cttgcgccag ttgccaaggc agtgcgcctt tggtgctctc gacagtgcgc
    35221 gcttctatcg aattcacggc accaagagcc aacgccgcac ggcctttgcg tgccttcgcg
    35281 aatctgccaa tgatcatgct cgctggatca aacgcggcgg atatctcccc taaccctgaa
    35341 aggaagctcc catgtggtac cgactctggc aattcaaaac tgctaacttc accgcccaac
    35401 tcgattggaa attcgagcaa gatcctgatc tatcgtgggc agacgaagac gtgctgcgcg
    35461 caatcgaagc aggcatctac aacaacgtga cgtttcgcgt gcgcgtcctc tttcgtggcc
    35521 gcgagatctc cgccgactat ctcggcaact ccgtctacga aaacgtcatg gactttcgcc
    35581 gcgagcgtcg cggctacttc cgtgacatgg tgcgcaccac aaccgctgaa gcgcggaagg
    35641 cattcgccaa catgccgcgc atcaaagccg cgtaacccgt caacccaatc accctagtat
    35701 atcgtacgaa caagaaagga cacacgacca tgaaaacgat catacacacc tattggtaca
    35761 acaccgccaa cgaacacgag cgccaagagt acgcaaccct ccgcgacaag ctcaaggcag
    35821 aggggtatcg ctgtttcgaa gcgctcggtg agtacgacta tcgcggcaag gatctcgaca
    35881 accgcgagat caccctcgaa acgcaacacc tgtttgacaa ccaatggaac accgccccga
    35941 tcgaaggcgt gagcgaacaa ggcttgcgcg tgttcgattg ggcgctcagc gtctacccgg
    36001 ataatcgcaa ggtcaaagcc ggctattggc tcgaacagac tgccgaaatg cgcgacatcc
    36061 ggcgcaacac cgtcaaatgt ggttattgcg gcaagcaaga gccggccgca aaaggctacg
    36121 tgttctgtcc ccactgcatc gatagcgagt atctcaaaga agacgagttg tatctgaccc
    36181 gcctccgccc cgtcgacgaa ggccgcaagc ctgttccgcc actcaccgag gcggaaaagg
    36241 cgcatttgct gcctctgtac cgcgaagcac agctgcatgg ctccacggct cgcggcaagc
    36301 ttcgcatcgc caaagagcga caagaggtcg aatccaagtt cgagcgcaaa acccgtagcg
    36361 ccaagattga acgcgatgga atgatttggc tcatggatcg aggcttccgc gtcgacaacg
    36421 tgatctacta cgaccacacc gagaagttct gctttggctg gcgtggcgcc atggcagact
    36481 cggtcaagtc cgccctgttg gacgtgctct cggaattccc gttcgattac gagttcaaga
    36541 accgctgacc cactccacaa ggcatcacgg acccccacaa atggtccgtg gtgccctttt
    36601 ctttgcccca ctgcccaacg acccacgcca ctccgtctcc aatccacgcc cctctaaacc
    36661 gctcaacccc catccaccac cctaaccccc atccaccacc ctaaccccca tccaaaaacc
    36721 gagcacaccc cctaaatgcc catccaacca ccgatctcca accgcccagg catacgtatc
    36781 aaacccccct ctcgcgcgcg tacgcgcgcg catgtacaca cgcgcgtacg cgcgcacacg
    36841 aaccactacg gcatcgccct cgtgctgacg ggagcaactt taatggttgc agctgccttg
    36901 cttgtcctgt ttgaacggct tgccgagttg ttttgaagct gtcggctgaa ccgaacgcga
    36961 tggctccccg tgcgcgcgcc tacatgcgcg caagagcata atttaaccgt tccactgtta
    37021 cttccgccgt ttcaaaaacg attgtcgtaa acgaatcttc gccctctccc caaactactt
    37081 ctgttccatg cttacattcg attacgattc gcacatgcaa aggattgatc caaactgttt
    37141 cgctgctgct attgatgaat ttaactagca ttgtttgctc cattcgcctt gggggtcctt
    37201 gggggtcctt gggggtcaca tggtattttc aatagactcc aaacgtctat acattatcta
    37261 ttaataattg gctatcacct actatccata cctttatatt taataatata agacctataa
    37321 gacctataag aaacagccaa tatcaacggc ttagcagctt ataggtctta taggtcttat
    37381 ggctcaacga gcttggtata cgcgttttgc gtctttccat ctacccattt aggtgttggt
    37441 ccgtgccaac ctaacttttc catcacgaac gcaagccttt tgctagctgg aacatttaac
    37501 ttttcggcag tcaatccgag gtaatgcaca taaagggttt tagaggtcac tcgtaattct
    37561 tgtcggccgg tgccgtctgc caacgggtag caatgttttt ccctactagc gatatcggca
    37621 agcaaatcga tccatggatc gtgcaccatg cgcgcgtctt gcgcgtgcgc cgcatctgcc
    37681 cataatgctt ccggcagtct caacgacatg cccgtcgctt caagctccac tgcttccgcc
    37741 cacaattgat cacgaacgcg gcgtaatccg tccaagttga cctttcctgt tctgattggc
    37801 caaaagcgtc gattgcctgt ttgcgacgtg agatatttgg agtcgttagt ggtgccaaag
    37861 aaaacgcatt gacgcggtcg gtctacgcgc atgcgcccgt acgcaggccg cgctcgatcc
    37921 gatcgacgcg aggcgaacag cttgacccgc tccacgtccg cgcggcgcaa ccccgcgagt
    37981 tcgccgatct catacaacca cacaccctgt aactgttcct gttgtgcgcg gtcgctcagt
    38041 gtcaatatct cctgatcgct gtggttctcc gtccctgcca atatttcaag cgtcgtggat
    38101 ttgcctttgc cttcggcact ctcgaacacg atgatttcgt caaacttgca tccgggttcc
    38161 tcgatacgtc gcaccgccgc caccagtgcc agccggccaa tctcgcgtgt gaacggatca
    38221 tccggcgcac tcaaataatc acgaagccac gtcgagatcc gtggcacccc gtcccacaca
    38281 agcccgtcaa aatagtcctt gatcggatgg aacgagtgcg cgagacattc ctgcatcagt
    38341 gcgctgtaca tgtgctccgc actcggctcg aatttccatc gttcgtggat ggtgcctttg
    38401 agcacttgca ctgcattgtc cgttagctcg cctgtccatt gctcgatcac gcgtccgccg
    38461 accatgaatt tgtcatggaa ctgatcgtgc cgacaactca actcaagcgc gcgcaacgct
    38521 attcgcgcgt tcgcgggcgt ggcttttggt gcgccggttg tggtgttatc gacaaaaatt
    38581 ggacctcccg ccaccgcggc cggcgctgtg aacacggccg gcaatgcata gtgtccatta
    38641 accgccccat taaaagatcc tgccggcgcc cctgttcctg cgtccgaaac tgtcgtctcg
    38701 ggcggcatca ccacctgccc ccgccacccg tgttggtgcg ccatatcgaa cagcgtgccg
    38761 atggtccttg gccggcgccc ctcgaccggc atgccgaagc tcttccacgt gtactccagc
    38821 ttgtcgaaat tgtagtgctc tgatggtgcg gagaactcgt cccaaagctc taacccaaca
    38881 tctgaaccgt cgctcctatc ccattgaagc gaatggagac tcatccccag cgcaagccac
    38941 tcgtcgcgcc ctagcttggt acggtcgatc gccgccagcg cgccgcgcac acgagcgacg
    39001 ttgtgggcca caagctcgaa cggcgcttgc gtcgccaatc cccgctgtgc tagcttcggt
    39061 ctgctcgcat cgatccccgt cgtccccccg atgtgggccg gcggcgtgcc gagcctcgtt
    39121 agaagttccg acgcgccgcc attttcccct cccggcgacg acttcgtcgt ccggtcctgc
    39181 ccaccacccg ccgcgctagc cgcgtggcac tgctccacga accatggcgg tagctccgcg
    39241 agcacgcctg cgttctcgat gggaccgtcg tgcacgggcc accacaccac ccaccccccg
    39301 tcattgcgga tgtcgatccc cctcactggg cggtcgctgc cggtctttaa gccgggttcg
    39361 tacttgaaga accaatggct cccatgcgac cacgtggtgt gcctgcgcgt gccccctagc
    39421 cggtggtccg cgagccatgg cgccgtgccc ttcctcgggt cgtcatcaac gacagtggca
    39481 cccagcaccg ctcccgtggg cacccccacg ctgttccatc ggggccggcc gcgctcgtcg
    39541 actgctcggg cgaacagggc gcgagcggcc tcgcctttga ccgcgtcgcg gtgcccgtgc
    39601 cccccattct tctttgagat cgcgggggtc ttctgccatt tttgtttttt ggtgtcccac
    39661 cagatattta cggggaagac cggaaccccc aggttaacaa tttcctctaa cgtcggccgt
    39721 cgtcctgtaa aacgcatacc ctgcctctgc tcgtcgcggt gacaccttgt catccgccgc
    39781 gtcgctgttt gacatttcgc cacgcgtcgc ctagggtcgg cgcgtagacg aattggcccg
    39841 cccctctccc ccagcgagca ggctgattgt ctcgcggcga tccgttgatc gtccgccggt
    39901 cgtgtggtga ctgagcccgc tttgagcctt gctcggcggg ctcacttttt attcaaaggc
    39961 ttggaacttt ttcccttctc gcgaaatccc atcgtccgtc ggctactggg tactgtcaag
    40021 cgtcataatt tgttcgcacg tagtgcttga cactacaaat cagctagtgt aatagttacg
    40081 gctggacaac aacagttgcc aggacatgac acaagctctc ttttcccgtg aggatctcgc
    40141 gcgcaaaccc gcccacgggc aggactgtaa ccgttgtggt ctatgctgcc gcgtgtccct
    40201 ctgcggactc gcccagcacg tcttcaagcg cccgcgcggc gctcccggcc cttgccctgc
    40261 attggaacac ggcgaccacg aaacgcagtg cgggctcgtc gccaacccgc agcattacgt
    40321 caagagcatc agcaaagcgg atgccgccgt gcgcgcgacc gccgctaaat atctgatcgg
    40381 tgccggcctc gggtgcaccg ccgtcttcaa tggcgagcct cgcgatgagg tcttcgatcg
    40441 catgatcacg atgcgcgctc tcgggggcgc gatgcgcgca gcaatgcgtg cttgggggct
    40501 cgtcgtatga tcgagatcat ctatcgctac tactgggtcg tgatcatcgg cttcttcgtc
    40561 ggcgcaatca tcggccacgc gcttgctcaa gcagcactgg gatggtggct cggatgaaaa
    40621 agcccggtcg ccgccgtcgc tacaccaacg ctccgccgat gcaccagtgg acggactggg
    40681 atcggcgtac atacgacgct ttgaccaccg cgtatggtcg gacgcgcttc tgcctgcgtt
    40741 gcgggttgag aatgtatcag ggtggcattc atcgctacat cggctactgg acaatcccca
    40801 acacttttta ttacattaat ggctggcagc gcttcaaccg gctcccccat gtgtgcgcgc
    40861 ccctcgaacc gccgataggt gcatgatgac caagaaggaa ctgtacgatc agtgtctcgc
    40921 cgctcgcgat gccttggtcg cgatgcttga atattatcgc tcggagagat gccccgatcc
    40981 cgagtgccac gtttgcagac ggtcacaaga agcggaagcg aaggcacgcg ccgtgctggc
    41041 acaaggggga ccgccgtcat tggagagcat caaatgatgt gcgattgcaa caacagcgga
    41101 ctgctcatta tcggcatcgc aatcggtatg ttcgtcgccg tgctgttgcg ttggctcata
    41161 acggacaata actatgatct ataaatctga gacgcccctt ttctgccgct gctgcggcaa
    41221 gcacatccgc aagcacacgg agagagaata tgtcaagcag tcacgcggtg aacatgatcg
    41281 cgcgctcggc agggttcact atggcacgtt tcgcaacaaa gccgagtgcg aggtcgccac
    41341 gcccgacaag gtcatctcca tcaggtacgg caacgactgc attctcagct ttacgacgtg
    41401 ggaccgcgtc tcttacgtcg atcgctattt ctgcacgaag aagtgcgcga tcaggtttgc
    41461 gcatcattat gctgcgctcg atgcgggcat gccggctttc cgacagagat tggagaatac
    41521 cccgcgagtg ggaggcagac gtcgcgtcgc actttgacgc tgtgtatgtc gcgggcattt
    41581 cttcgcttgt gatcctctcg tgtatcagtt acagtcaaca gatgattcag accctccagc
    41641 gctaagggaa ttgagatgtt tgccgccgtc ctttgcttaa cgctcgcgat cgtcgtgctt
    41701 ggcgcctgcg tgctcgggct ctcgatgcgt ctccagcgct tggaggacgt gttcgcccgc
    41761 gcgctcaatc attggcctcc cggtaacggc tcgttgtccg gccaacagca agcgcgcatg
    41821 atcgaagatc tcgatgcgga gaattggggg aacatttcga aagctgaacg cgaccgtatt
    41881 aggatgagaa tgccaaatga ctgatcctgt ccaaattcat cacgtgcaaa tgttctgctg
    41941 caacaagtgc ggcgacattc atctcaacgg aatcgcagag gacgtgaaga ccgtcgtcgc
    42001 gcgcttgcag atggagccga gcgctgcctt gaacattggt gcgtatctca tcgggttggc
    42061 tctggcgatg acggggggct ccaccatgat cgtggaggcc gtgccgctca tccccacgcc
    42121 gacgagcgtc gtcgagttgc aggaaatgac gggacacatc atcacggggg agaacgatgg
    42181 cggtgaaacg aaacattagc ggcgtcgact acgacgtcat cagcccgagt ttctacgtgc
    42241 gctacgagcc caatatgcgc atcatgttca tgtacaacgg ctatggcgag tgggtcacgt
    42301 acatcaacaa cgagcccgtc ggtctcgatc tcacgcttga ggcggcgggc gatgccgtcg
    42361 ctgccgggct ccacaattac tcgccgccta agagggcaag ctgatgggat ggcagcagtt
    42421 tttgttttac gcttcgttgg ttatttttgt cgttggggca gtatggagca tatgtagaga
    42481 ttgaccatgg ccaccaagca ctatcacatc gtcgccggcc gcgtgcgcta tcgcgtcgtc
    42541 ttccgcggcg ccacgccgtt cgctgtgttc gtcaaatatc atcggacgtt cccacgcggc
    42601 cgggatggat gggtcgagcg cgtcatatgg cattcgtacg accgaaagtg tccgcccgcc
    42661 gccacgttcg caattcaagc cgcgaagaaa gtacgcaatg agcaaaagcg caaaatcact
    42721 gtcgctgcgt gagtgcgcag aagcaaaagc ttggcgcacc agtcgcgcac tgacgatcaa
    42781 gaagctcgcg gagttgaccg gcttctcctg cgaggccatc atgcttttcg agaaggggaa
    42841 gttgccgaac ggtcgcccca tcaagacgga agcgtgggtt cgctatcgtc atatctgcgg
    42901 ctcgatcgat atcctgttgc gctcgggcgc aatgtttcgt tggggggata catggcaaac
    42961 gggatcgtga tttatttgct cactggtacg gcactatcac tgtggttggc gggacgtcct
    43021 atcttgactg gtacgtcatg gcttgcctat gtcatcgttt cactaatatg gcccgccttc
    43081 gttttttgtt tctgtcttgg catagtgata ggacttttag acataatccg acgcattcgc
    43141 cgttgacttt tcattaaatc tgctgtacgt cccgtgccat gcgtgtcctg attatcgatc
    43201 ccctcgcgga cccccgcgcg tcgagtgccg cgtccactct cgtccatgtg tccaagctcc
    43261 agcaaatgct gaaagcgtgg cgcctcgacg ccaagtccga cttggcgatc aacatgggcg
    43321 acgtcgactc atatatgcgt ctctacaaat acaacgtcgt gctcatttgc gacaatgacg
    43381 atacgcggcg ctatatcaac aatgcgcgac actgcgatcc ccgcgtcgcc attatcgtcc
    43441 tctcgcaagt gtctgacaac ctcgtggcat gtcttgggtg gggcgccgac gattatcgag
    43501 tcacgcccgt gattgcggag gaactcgtcg cgcgcatgaa gacgatcgtg ctgcgccatc
    43561 gcggctacga tcagcacgtc gtgcagtgcg gccccatccg cttggatttc gatacgcagc
    43621 gatggctcgt cccggaatgg cggggaaact tgcttgagga atacgcgccc gtgcatctca
    43681 tgcccgcgct gtggaaagtc ttggagtgct tggtgctgcg ggcgggagag gtgtgtacgc
    43741 gcacggatat tctcgaacac ttgtatggga caggctcggg cgagcacgat atcgaggcga
    43801 tcgacgtttt catttatcac ctccgcaaaa agttcgccgt tgccggcatc cccgccaaca
    43861 ccatcgagtc gtcgtggggg cgcggctatc gcatcaaccc gctcgccaac ggtcccgcca
    43921 tccccaaagc gcgcggcggt cgcccgcgaa aacgcaagat cgagcagatg caggcagcgg
    43981 agtaactcgt gcgttttgtg gttcttgatt tcgagactta tttcgacgac gagtacacgc
    44041 tgcgcaagat gacgacggag gcgtatattc gcgacccccg tttcgaggcg cacggtgccg
    44101 ctatcaagtg gcaggcgaac atcccggcaa gatggtacga cgagaaagag ttgcgttatg
    44161 tcttcaagca ggaagattgg tcagacatca tcttgtgtgc tcaccacgcg cattttgacg
    44221 gactcatcct caaccaccat tatgacgtgc gtccacgcaa gtggtgctgc acgctcgcca
    44281 ttgcgcgcca aattcttggc aaccatctgt ccgtttcgct cgatagtgtg cgacggcatt
    44341 tcggcatgcc ttctaagtca acgccttacg ggcttttcaa gggacggcac tggaacgaac
    44401 tagatcgtac gacacaacag caagtcggcg atggtgcgtg cgatgaggtc gagtccatct
    44461 ggcgcctgtt cggcatgttc tccaagagct tcccaccgga ccaatacgag tacatcgaca
    44521 cgacgatacg tatgtttacg cagcccatgc tgcgcgcgga tatcgaccta ttagctaaaa
    44581 tttggcagga cgagaacaac gccaagcatg ctcgcatggc gtcgctcgga gtgtccgtgg
    44641 atcagctaca atctgcagac aaatttgctg aactcttacg caaagagggg atcgaaccgg
    44701 aaacgaagac gtcaccaaag gggaacgaga tctacgcgtt cgccaaaaac gatgagttca
    44761 tgtacggcct cttggacgat tccaacgagc gtgtgcgcgc cttggccgaa gcgcgcttag
    44821 gcgcgaagtc gacgatcatg cagacacgcg ccgagaccta cgggttcatg gcacagcgcg
    44881 gcccgctctg tgtttatttg aagccctacg gcgccgatac catgcgcccc tcgggcgggg
    44941 acaaggggaa ctttctcaac ctcaagcgcc ccgatcccga caaccccaag gcaggctcgc
    45001 cgatccgcaa atcgctgatg gcgcctgagg gttatctgct cgcgcccgtc gatttgtcgc
    45061 aaggcgagtt ccgcattggt gcctacgtcg ccgagcatca cgagttattg gagaaattgc
    45121 gcgtaggcgt cgacccctac atcgacatcg ccagtaagtt ctatcacgag cagatttaca
    45181 agccgaagag cggggacccc cgcgagatcg agatgaaaca gaagcgcggc tgcggcaagc
    45241 aggcaatgct catgtgccag tacggttgcg ccgcccccaa gttccaaaaa acggcagcgg
    45301 cgggcctcta cggtccttcc gtcgacatgt cgatcgatga ggccgagcgc tttgtaaatc
    45361 tgtatcgtga tgagaattac cccgtcgtca attattggaa aaccggcggg cgcatgctct
    45421 cgcggcttgc cggcgggcct ccgctcgatt ggggtcctct ccacatcaag gacaagcgtc
    45481 tgtatgcgcc aaacgggctc taccttcatt tcgagacgct tgagtatcat cgtcccacgc
    45541 aagaagagat cgacgaactc gatttgcctc gctacaaatg ggacggcttc tggcgcgtca
    45601 agacgcgaaa cgggtggaaa gagatttggg gctccaagct gttgcagaac atttgcgagt
    45661 tcctgcaaca atgcgttgtc gtcgaggcga tgaaccgtat cacgcggcgt ggttatcgcg
    45721 tcttgaacca tccctacgac gagctattat gcctcgtgcc gaaagatggg cgcgaggaaa
    45781 agcacttgga gatcctgatc gcggaaatga agcaagcgcc ctcgtggctg ccgaacattc
    45841 ctttggatgc tgaaggttct cttggcgaac gctacgacaa ataggaagat atcatggaac
    45901 ttgaacatat cagtttcgtc tcaagctggt ggctgatgct gtgcatcatc tgcgccatgt
    45961 gtttcatcat gttcttggaa aagatgggca tatcgatcgg cttcaaaagc aaagaccaat
    46021 aaagtattac aaaagcccgc aaatcacttt ttgttacttt atgcgaatta gataatttcc
    46081 agcttccttc gatagaatgg aggtaaatcg cactttttga aaaagtcgat ttgctacaat
    46141 gcgtgcgtct cgatcaaagg agtcgaccat gagacgcaaa acagacgtcg cgtcgatcga
    46201 cgcgaaaatc aagaagtgga actcgcgttt gaaacgggcg gtcaacgcaa tcgccaagct
    46261 ggaactccag aagaaacgat tgttgcgacc aacgcggaag ccgggaacgc cagtgatcgt
    46321 aaaaacaaaa gtcgatccgc tgccggcatc attggcgcaa gagtatcgta cgacagcaga
    46381 cgacttggac gtgccggcgt tcctcaagcg cagcaaggac gaaaccgcca aggcggagat
    46441 ccaagagcag caagcagaga agaaacgaca gaagactgcc ggccgcatcg ccaagctcaa
    46501 agccgacaag gccggcgagc gcaaacaaat gcctttgtcc ggcaaggatg ccttggccta
    46561 tatcaagggt gccatggccc gaggtgagaa aataaaggcg gcatgattat agggttgccg
    46621 cgactctcgc gaccgcgtag caacacgcgg tcgcaacttt tttggagagg ccaatgcaac
    46681 tgcccccaat cgtctgggta ctctgcgttg ccgtctctct cgcactgttg atgtggatca
    46741 tgctcgcgtt catgtcacgt ccgatagaga cgaatatgtc ggcaattgcc ggtgccgctg
    46801 cagccgcagc agttgccgac aatacgcggc gacctcttgt cgtccgctaa aaagtcgctt
    46861 gccagcctgc cgccgctctg ctaatagagc ggcggtactt ttttaagtct cgtccaaccg
    46921 gagaccgtca tggccaagaa gcgcatgggc gcccctatca agttcacccg caacaagcag
    46981 gtgcgcgcca aggtgatgtt cgcaaaaggc ttgacatccg tcgaggtcgc cggcaggttg
    47041 gatctctcct atgcaacaat tcaagcgtgg cgcaagaagg gcatgcgcct gcgaaaggac
    47101 tgacatgaac aaccccgcac acgacgtctt cgcccctttc gcaccggcaa cgccgcccgt
    47161 cgcacctgca accgacgctg agacgacgaa cgcccccaag gggaaaccga gaaaaagcgg
    47221 tcgcaaagca acgacgccac gcgctcccag gacagcgccg gcaatggaca tgactccgat
    47281 cagtccaaag acccatcagt cggcggtgca gaagaccgtc atcatggtcg atgccgtgac
    47341 gctgctgacg tctatccagc atttggatca ggaagcaaca agcgtcttca tgtcggcgct
    47401 cggcgctttc caagcgttga agccggttca gcggacgcaa atcgcctacg cgctgcatca
    47461 gctgtttccg tgaaaaaccc gtatctgcca agtcatcaca tcattgaatg tcggcttgtc
    47521 gttcacgaac gcgtgctcga ctatctcaag tgcggttggt atattcgaga tacgttgcac
    47581 gactgtcatc acggtcatta cggcgtgatg atgcagtggc gttgcgattg taaatgcgtg
    47641 gaacccatcg atgccaagct tcaaagaatt cagccgagcc aatctcaaga gatgtgagag
    47701 cgcaaaggga ttcaaacact cgctctacaa atgggacgtg aataaatggt ttgtcgccat
    47761 catgggcgag cttggtgaag ccgcgaacgt cgtcaaaaag ctcaatcgcg aggaagacgg
    47821 aatcgtcggc aataagcaaa cggacgtcga attgcaactc aagttgcgcc acgagatggc
    47881 cgacgccttt atttatctcg atctcaccgc ccaaaggctt gggttcaaca tcttcgatgc
    47941 cgcagtcgag gtgtttgaca ataagtcagc ggagatcggt taccccgttc gcctgaagaa
    48001 atgacgtatc aactccccat cggctcctat tccatgctca acacggcaga catttgcctt
    48061 tggcagatgt ttcgccgtta catcgtcaag gatatcccct tcgtcgagag caaggaagtc
    48121 aagcacggga acaagacgca caccgcgttc gagcatcgct tgggctccaa gaaaaagccc
    48181 ctgcctcccg acatgcagca atgggagaag tggtgcgcgc cgctcgatcc gtactcgccc
    48241 gaggtcgagc aatggttcgg tcttcgtcgt gacgggctcc ccacggcgtc gcgcaacgcc
    48301 gattgctatt tccgcgggaa agtcgactgc ttcatcttcg atcccaagac atttcgctcc
    48361 gcaatgattt ttgattggaa aacggggaag gttcgcgagc aaccgttcga gcttgagacg
    48421 tccgcgctct tcatcaaagc gaaatatccg cagctggaga aaatcaccgg gcgctacgtg
    48481 tggctcaagg acgatcgcat ggggcaaccc tacgacttgt caaacgcacg aagcacgtgg
    48541 gatactgttc atcataagat gaccgatatc gagcgccggt tgatgcaggg tccccaggcg
    48601 ttcgagaaaa tgccggggcc gctctgcggt tggtgcagcg tttttgattg cgagcacaac
    48661 accaatccga atcgtggaga gcaaaaatga ctactgaacc gtgggaagac gggtttcaat
    48721 cggtgggtcc gcgacgactt cgaacctttc ggtatcccct gactcgacgc gaccatccaa
    48781 aatggtgttg ggaactctct cgattagaac ataattctct ccccactgcg gaaacgttgg
    48841 acgttcaaac gacgccaaca atgggcgaac tagccacatt ggttggcggt atccttcggt
    48901 ttctcctgct cgccagcggc gaacgagcca aagctttcct cgccaagaaa tggtatcgag
    48961 cagaccttcc tgctcgaaag gcccgtctgt aagaaagaga cgcgttttaa aaacggattc
    49021 gatttgttcc atgcttaccc ccgagaatcg agtcaagaat aaagtacgcg actatttaaa
    49081 gtcaattggc gcctattgtt tttcgccggt tcagatgggc tacggttcgc gcactttgga
    49141 tcttctcact gccattcccg tgatcgtgca ctccgaggtc ggcgaactca gaaccgcgat
    49201 ctttctcgca attgaagtga aacgcaaggg cggaaaacta actccgtttc aaaataaaat
    49261 cattagagat attcaagatc tcggcgctca tgctatatgg ggtgacgatg ccgccgtgat
    49321 catccgtcaa atcgagagtc tgcgggcgca cttcaatggc aggttggttc tacgactccc
    49381 aaaataaaat attgctctat gaacgatccg aacaaatcac acattggatt cctgacgcca
    49441 aagaggtggg cgcttatgtg ggtattcctc gcactttgcg caattgtcag ctgctccgtt
    49501 ggcttaatta tcccgtctca ccaataatcg acaactacga ttggccgatc caacccggcc
    49561 gcgacccgct cccgcaccaa aagctgatcg ccaatttcca agtcctgcat ccccgctgct
    49621 tcaatctctc cgaccccggc acgatgaaaa cgctatcgtc gctgtgggct gcggattggc
    49681 tcatgcgcca gttcccgccc ggcgagtgcc gtgctatcgt cgtctgcccg ctgacaattc
    49741 ttgaaagcgt ttgggcaaag accattttcg ccaattttct cgataaacgc acgttcgagg
    49801 tgctgcatgg aaccccggaa caacgactca agaagctcgc caagccggct gacttttatc
    49861 tcgtcaattt tgatgggatc aatatcggtg cacgctttgg acaacgcagc gagcttcacc
    49921 ttgacggctt cgcaaaaaat ctccgcgaaa gaagtgatat taagatctgc attattgatg
    49981 aggctcgcgg gtatagcgat gcctcgacaa agcgacatcg cgttgctcgc gaaatcattg
    50041 gatggcgtga gtatctttgg gagcttacgg gaacgccgac tccaaacgct cctaccgatg
    50101 cttacggtct cgccaagctc ctgaacaacg ctttcggcaa atcgtacggc gtcttcgaaa
    50161 aggaaacgat gtacccgctt ggaccgtaca agctcaagcc gagacccgac ggttacgagc
    50221 gcgcccggca attactggtg cctgcgatcc gcatcccgat cgagtgggtg tggacagggc
    50281 cgggcatgac gacacaaaaa tgggaggtgc cgcttacgac cgagcaaacc aagctgatga
    50341 aagagttgaa gcgcgatctc caaattcaac tcaagaaggg cgaacccatc actgccgtca
    50401 acgaggcggc tgttcgtacg aaattcctgc aattgtccat gggggcggtc tacgacaccg
    50461 agcacaaaat tcatttgatc gatgctgcac cgcgtatcaa aacgctggag acgataatcg
    50521 agagcacgca gcgcaaagtt cttatcttcg taccattgac atcggtcatc gacttattgt
    50581 acaaacgact ttccaagaaa tgggcggact ctgctaacgg ctggttcggc gacgtgatca
    50641 atgggcaagt cgcccaaaaa gatcgtatgc cgatcatcca aaagttcgag agcgaccccc
    50701 aattcaaatg gatcttgctt gacccgcaat cgacggcaca cggcatcaac gaaatggttt
    50761 gcgccgacac cgtcgtgtgg tacggttgca cggacaaagg cgagctatac acacaaggca
    50821 atctcagggc gcaccggccg ggacaaaagc atcccgtgac gatctttcag ctggtgtcca
    50881 atccgctgga acaagagatc ttcgatcgct tggatgcgcg acagtcgcta cagggatcgc
    50941 tgttgaagat gatcgaggaa gggaagctat gaaaaaggtc gtcgtcaaac aggacccgga
    51001 aaaagagatc ccgaccgaga tcctcgccaa cgatatcagc gacatcgcaa acggcgtgcg
    51061 cgcagttctt ggcggcaggc tgaaccgtcg cgctcttgtt ttgctgatcc aagccaattg
    51121 tgtcggcaaa atttccatcg tgactatcaa caacgtgatc aacagcatcg agtcactcga
    51181 taaggcgtat ctacgcaaat gaacgagcgt gctgccgacc caatcgccga cctcatcagt
    51241 gagtggcgca ccatcgacga cttcgtcaaa gcagagacga agcgcttcgg cgagcacatg
    51301 gcgccggcac gcgagcgctt gaagtcaata gagacgcagc tgcatcaatt cctgctcgac
    51361 aacaagatcg agagcatcag caagaaaggc ttggggaccg cgtacatcag tgaattgatg
    51421 gaccccaaag tcgaaaatgt cgacgcaaca cttgactggg cgttggaaaa ctacgacgct
    51481 gtgggacctg attttatcaa ggtctcaccg aagatcgaag caatacgctc ttacatggcc
    51541 gaccacgaca atcagacgcc gccggggatc acagtatcgt actatcgacg agtcaatgta
    51601 cgacgcacat aaatgctaac aggaatagaa aaattagacg cgcgtatcat tccagaacca
    51661 aattcaggct gctggatttg gttaggatcg attaattcgt acggatacgg tcaaacgcga
    51721 ggctttgaat caagctcgct agtacatcgt attttgtatg aacgcaaatg tggtttaatt
    51781 ccacagggat tggaattaga tcatctctgt cgagtacgat gttgtgttaa tccaaaccat
    51841 ttacagccgg taacacaccg agaaaatatt tctcgcggaa atgccccttc tgcaaaacaa
    51901 atgaaacaaa cacattgctt gcgcggtcac gcactgacta gcgacaatat ttcgttagtc
    51961 aaaactaaat atggatttat gcgtcgctgc aagaaatgtt tctgtcttcg taatcaacgt
    52021 tatcgtcgtc agcagaacag gagaacatga tgaccgatca gttgccagcg tacatcaaac
    52081 aacgcgaccc gagcagcgtg tctctcgccc gccggggatt gcagaacgtg ggggcgggat
    52141 cgccgcctta tctctccatc gaaggcgggc gcttcacgct gatcgatgcc gggcagaacg
    52201 cgatcccgat ccaaaatcct tacatcgacg tcgtggtcgt ggatctcaac gatcacgtgt
    52261 ccaaggtctg gttcggcgaa gcctacgatc ccagcaaccc ggcgccgccg cgctgtttca
    52321 gcgacaacgg caaagcgccg tcacaactcg cgtccgagcc gcagtcgccg acgtgcgcat
    52381 cctgtgcgtt caacaagtgg ggctccaaga tttcgcagtt tggtagcgag gtcaaggagt
    52441 gcgcggacca ccagaaaatc gcactcgtcg tacccggctt tcccggctat tgcttcctcc
    52501 tgcgcatccc cggcggctcg ttcaagaact ggcgtgccta cctcgccaaa ttcgagcgcg
    52561 cccccttcga cgtcttcgac gtcttgacgc gcatcacttt cgacgtgtcc gagcgcaaaa
    52621 cgggcgttct cgctttccaa ggggcgggct atctcgatcc cgcgctcgcg caagaagtcg
    52681 gacaggtcgt cggcagcgga aagaccgaca tgttggtggg acgcaccgac acgccgatct
    52741 tgctggcgct acaaggaccg cccgcacagg ggcaggtgac ctatcagccg caagcgccca
    52801 cgcagcaacc tttccagcaa gcaggaattc aaggaatgcc tgcacaacaa ccgcaattcg
    52861 cgtcgcaaca gccgttccag caaacaccgc aaaccaacgg tcagcagccc ccacaagccc
    52921 cacagcgtgc tcgccgtggg cgcaagccag ctgcgcagca acccggtccc ggcgcacagg
    52981 cgcctttcca acagccccag gcgccagcgc aacagccgtt caagcaaacg cagccggcgc
    53041 agcaaccggc ttatcagcca cagcagccct tccaaccggc tcagcaaccg ttccaacagc
    53101 cccaggcgcc agcgcaacag ccgttccagc aagcgcagca gccggggcca cagcccggct
    53161 atcagcaaca gcagccggga cagacgttcg gcttcgcaca gggcaacccg ccgccgaacg
    53221 atatgatgga tgcgatcaag cagacgttcg gctaaacgag cgacgctctg cccccgagcg
    53281 gtgtatatcg gaactggttg ccgtagcggt ttaggcggtt ctctctcggc gtaacccagc
    53341 gcaagttctc gcgccggcag tcgagagagt ttccattttt gtgatcgacg agcgcgtgct
    53401 tgtcggaagg ccgggagatc ccggttcgta ccatgatctc cacgtggaga tacagggtat
    53461 acacgggatc gcggggttcg tccttacggc gtgctccccc ggccgctcgt ctcaaataga
    53521 gcgccccgca cttgttgggc ttggggttcc atctccatcg tacgaaatgg tgatagtcga
    53581 tctcgtcgac gatcgcccat gtctgcgcgt catcgtcgcc gtaaatgcga aactcgtggg
    53641 gctcatcgag cgcccacgag ttcggatcaa acgcatcaac acgatacagc atacattggc
    53701 gaggtgagtt atgcgcccgc caacctatga tgcctgcgat gtgcggtcaa cacacgatag
    53761 cggtgtcctc cgccgtagtg gttaaaacgc gcgtgccact cgcggccggc aagatagccc
    53821 gagccgggag gcgaccaact catgtggacg tgccgcaccc gtccgtagtc cacgctatag
    53881 ccgccgctcc atccgtggag gtgtgcgtag atgcaaccgg ggttacccgc caagtcggca
    53941 gctttgctag gataggcgct gtggagtgaa gcgtgtccag tgccggcgac gcgcgcaccc
    54001 ggtcgatacg cggacacgat atgagagcta ggacagacac cgagaatctc ctgaactttc
    54061 gacgccagcg gcgcgaccaa gtcagagagc aggcttgtcg cgtgattctt tgcggaatgc
    54121 tgcacaggac gcttgcgtga gtgcacacgg ttgtgtactt gtgtcactgg aacgtcttcg
    54181 ctcagtcccc agttatacgg agtgaagacg tcattccctg gagactcctg caatgtccgc
    54241 acacaccctc gatcatcgca agtgatcgtc ggcgcagcga cgctactgga actcaggaaa
    54301 gacgcaacgg caagcaaagc taggcgatgc atgttggtta cctcttagtg tcatgggagt
    54361 gacacagaga ctagccgaca tgcctcgtct tgtctactaa caatatccta attagtcgcg
    54421 tgagcgatat gctcgatgcg cggatttgag cgcggtaatg ggatatattc gaggtgtttt
    54481 tgctgcttgg tatcgagttg ctcttgcaaa gcaggcggca cgccttgaac ctcgaactga
    54541 atgccttttt ggttgactcg aattggtgcg ttgaaccaac gttgccccag attgcaatac
    54601 cattctatgt tgggcgcgta tgaccaaacg ccaggatgaa tgctgctcgg aatcgcgaac
    54661 tcgcgatcga tagtcacctc atctgccggc gtctccgtca catagatcgt gttggtgccg
    54721 acgtaggtgt gcacctctcc cgagttatcg ataatgcgcc gctcgatatt tccggggcaa
    54781 atgcgatgct ctttgaaacg catgcggatt ttaacggtgc cccccggtac caccggattg
    54841 ggttcgatcg tgcccgaaat caattcgacg ggaacgtccc gatcgagtac gacccaccaa
    54901 aaacaaagtg cgacaaagcc ggctacaaga ccaaaaacaa aatgtccgga tacgcaaaca
    54961 agccgcaacg gcaaattaat gaaaagtgcc gtgttcaaat gcggcatcac taatgcccgg
    55021 ccccaccccc aagtcctgcg agcaatttcc ataactgcaa aagaatgggg agagcgacga
    55081 gtatagcgcc gactgtgcga ccccacgccc agatgaccga ctttagccac tcgcgccttt
    55141 cctctctttt gagtattacg cgtacgcggc cggtttcgtt ccgatcgagt gcccatttcg
    55201 cgcccatctg cccaccgatt tatgcgatca ggttgcttgg acgcgcgcac tgtacgcgtc
    55261 gtcgtagatt ttctgttccc ctggagaaag ttgtttggag ttcaagacag ccagtgcaac
    55321 gacgtccaca gcgagcccgc cgaacggaaa gagatcgcca gcaatcgttt cgaaaatcgg
    55381 gagtagagac ggctccacat ccctgaaaac atcgagcgga gctttgccgg cgcggatgtc
    55441 atcgatgacc gtcggcaacg ccttgaacat cgttgccagt tgagtggaat cgagaacaat
    55501 cgccgtcacg tcggtttact ccatacagcg caagcgcttg cttgtcgctg ctcgaaagtg
    55561 tccaagagat atccgagcgg gatcagcggc catagcagcg cccccaggaa tatccaaacg
    55621 ctgatcgtac gatcatctac cgcgccccag tgtgcgatcc aacccagcaa aacaccaacc
    55681 acgccgcaac tcgctatcgc gagcaatacg gcgtggtgaa acgtcagctg gccggcggcg
    55741 taggggccgg tgtggctacg gccgggctgg caggaaaaag tgcgccgatg atcccaccca
    55801 cggtggtgtt cagcgcactg cggccggcgg caccgagata gaggtaccat agatcactta
    55861 gccagttgtt ggggttgagg ccgggcactg caatcgcggt cggcaaaaag ccgaaatggt
    55921 tggcaatgac gacggcggcg ccgatcgcca agccgatgta agtcttcgaa cccgcgagag
    55981 cgccggcaat gcccgagacg cttggggttg gaagggtaat tgtggtggtc atcgaaggtg
    56041 ctcccgtttt aggggcttga gtataaacaa tttttggtgg ttgtacaggg gtaccactct
    56101 cggccatttt gagtgcttcg gtcccgattt cgtcggtgcg gcgctgccaa tctttatcaa
    56161 agtattggtc gcccttggtt tctttgtaca cctcatgccg gcgggcagtg aatgctttaa
    56221 ttgctgcaat caggtcggta ttcgccgcaa cagcggcagt aatcggaccc cactttccat
    56281 catttttaac cccgagcgcg acctgcaaaa tgcggatcga ctccgtcgtg ccttcattca
    56341 cggcagcatc aaaaagttgg agatcgaggc cgggacgaag tcgatcacaa taaggctgcc
    56401 agaaaaatgt caaatagatt tgcgaacctt caacctccgt catctctcgc acatcttgtg
    56461 tcggcaaccc caaatgcttg cgataaatat catactcgcg ctgtatgatg ccgttccacg
    56521 tcttcccgcc gggatcgtgc ggatcattat cgaaattttt cgggttgctc cattgcccca
    56581 cgacgttttg ctcttgcgca agcacgaaag gaagacagag atcaaaacgc gtagtcattg
    56641 ttgtgcctca ttttaacgga acgacgccgc cagcatattg tcgtttgatg acgcgccgga
    56701 cgccatggtg atcgtcacaa cgctcgaagc attcgatgca ttgacggcag agtacgcgga
    56761 tacggctttt ccgagtccga cgtgatgacc acgcgcataa ttttctgtgc ctgagaaaac
    56821 cgcggcgccg tcctcctgaa atgcgcagac gatgacaaag ccgttcgcgt tggtctgaag
    56881 ggtcacagag tcggtcgtat ctcccggtgt catggtcttg ccggcgcttg caaccggcgt
    56941 cgcgctgttc aaaagcgacg ttggaactgt ccacaaatca aacactgatg ctgcaaccac
    57001 accagaatat tgagcagcga tgctacagct ttccactcca gtcgcgatct gacatgtcca
    57061 gatcgaacag ccgccgctta ccgatgccgc cagggtcatc gcgataccag agccggcgct
    57121 accaggattg attacgccgc cgggatacgg tgtcaaagtc acgcccgttg gcgtgttcgc
    57181 ctgcatgaca gcaagaaaga ccgtctgcgc gacagagccg tcgccggtcg ctagattgct
    57241 gacgctgctg caaatgtgcg ttgagttgtt aaagaccgtc ttggtgccgg gcggccgaaa
    57301 cgtcggcacc ggaatcgagg gcgacgcaca ggtgatccaa tacggcgtat agttgagcgg
    57361 tacgccaatc gagctgttgt cgatgatcgg actgctcaca ttcggttgcg tgccgtaggc
    57421 atatctcaca agtcgctggc tggtttgcag gcttgaatgc gtgagcgtga tcgtagtggc
    57481 attcgtgcgg actgcggccg atggcgtaag ccacgtcgca ccaccatctc ccgaaacctc
    57541 aaacccggtg atcccgctcg ttggtgtaaa gtcggtgccc atcgaatgcg taagcccgac
    57601 ggtcgtgtgt gtcgcgtccg tgagcgtcgc cgaggtaata taccagtgcg gatagttcga
    57661 ggtagcgccg gcaatcactc cagccgtttg cgcgaacatc tggccgacct tatcgcagtc
    57721 ggcccccgtc atgtgcagcc cgtccgcacc aagcgcggca aaaatgtcgg tatgtgaata
    57781 agtgatattc ggcgcttgcg tgccggcatc gtagatatat tgctgcgtct cagcccacca
    57841 gggaccgcct gacggcgtgt ttggtgactt cagggtagca agactggaca caattatcgg
    57901 caattgagcg cttgatcgtc cggtctggga aagggcctgc gattggatca gctgcagatc
    57961 gccgacccac tcgttttcga attgattcgg cgggacggat tgagcattat tttctccctg
    58021 attaaaaaag agcagttcaa aatctccgtt cacgttcata gcgttgagat tgttgacgac
    58081 gttcgcccaa ttagaacctg agagaaaacc aatatccgca ccaacaaccg acagatcgat
    58141 cgcagccacc gcaattccca ggagactatt gagattgttt aataattgcc tgatgccatt
    58201 ggccgccgga acggcaaccc aagcacttga tgaccccttg ttaccttgga agcaactcgt
    58261 tcccgatgcg gcgctcggtg gtgatccgtt ggtctgggtc gacaggacgg acatgttgct
    58321 ctggccgtac atcaggcagc acgcgcccac acgaacggta cctgttccgg cggaagagac
    58381 ggaattatta tctccgcggc gcacctccgc cttcatatcg acgccttgcg gggcgccggg
    58441 tattgatccc tgaaagaagc cgctgccttg ggttagattc gtaagattgg tccaagcgac
    58501 gacgacgctg ttatcgctga tcttgcgcaa ctggccttga ggatttgggt taggccctgt
    58561 gtaggtgcca gacacataga ctggacccgt cgtctgtccg gcagtgcgct gaaagaccgg
    58621 attattcgta aaatcaatga gcgcgatcgt tccggcagtc gacccatgca ctccccaagc
    58681 tgtcgcttct ctctctggaa gaatgagggt cggtgctgca agaagaccaa gcaagagccg
    58741 ctgtctactg atcgcgatcg gcatgaccat tcaacatgct gcaaggctca tagccgtcgc
    58801 aaaggtatga aatcgcgtgt tgatatttga cgcctgcgtg gcgttcaatg ttccccctaa
    58861 aaacacccat gcgatttgat cgttcgtgaa tagcgcgata gtgccattgt tccgtccggc
    58921 cagtatgacc atcgatgtcg cagaaagtcc ggatgatgtt tgcgaactgg taccatcaga
    58981 cacgccgttt ttataaagaa cgcccgcaga agatgatgtg cgagtgatga tccagtgcgc
    59041 ttgaacggag gaccccgaag taggggacgc gggagcactg ttggcattga gccaaaaacg
    59101 cgattgattt ccattggtaa aattcggctg gaacccaaac gtattactga aacttgatcc
    59161 ctctgtgcca tactctgacc aattctgcga tgtcgtgcgt gtcgacagta cacagacgcc
    59221 gccgcttgcg ctgttctgtg taaaattgac ggcgttcgtc gatggcaccc atccggtgtc
    59281 cagtgatgca gcagaaccat cacctgtata gcccacgtcc gcagtgaatg tcggagaacc
    59341 gttcgtcgtc agcccaaaac tggtggagca gagattgagc gcggcagtgg tcgtggaatt
    59401 cgtcgcaaaa atatagagaa gatcgaaatt tcctgtacta ccgctccatg ctgagcaacc
    59461 gtttccatca gtgatcaggc cgcagatcaa tccgtcatat gcggattttt ctgtgttgtt
    59521 catcccgctt gtgcgggcaa gaaatgttgt tgatgccgaa cacgatggac tgaagcctcc
    59581 tggggcacct aatccggcat gcgttgtcga cagttgcgca atagcagggg caacacaaat
    59641 aagcgcccca agcagcgcga gcgcagcctt aaaattgcgt gtaccaaata tcgacatcga
    59701 cgccgcctgt tccagttgag ttgatgcaga gaccattgcc ggacgtgttc gccaatccgg
    59761 tccagaatgg cgcgagcatc gtttctccgg tgtttgcggc ttccgtcgcg aggccggtta
    59821 tttgcgtgag cgtcgaggcg caattggcgt tcgccgatgc cgtgttctct aggaaccatg
    59881 tggcgacacc ggccgcacgc gagcgccatc cgcagatacg gatcgtctgg ctggcaacac
    59941 cttgcacggc caaggtgtcg gtcgccgtcg tgatgtgctt gaagacatgg ctgtcgcacg
    60001 cgatcaatgc agcgacgtga ccacccgtcg cgccggatgc attggccccg aggtagacgg
    60061 cgtttgcggg cggggccgct cctgtcgcga cgatgcccca attcgcagcc gtcgtcggat
    60121 tgacggtgcc gataccattg ctgcctgtgg gaatcgcagt cttgaggttc accagaagat
    60181 tgccggcgct atcgagctga cacggcgagg cgttgcctga cgagatcgtg gtcggcgtgg
    60241 tgttgaactc gcagccgacc tgcagggcgc tcgctggcgc cgtggcattc tgtccagcga
    60301 agtccatgac gccgccgaca ttgccgagta tatcgacctt gccaatggtg ttgccgcctg
    60361 cagggatcgc ggaatccgtc actacgttgt tgcgtttaat caacgcaatc agcgagcacg
    60421 acccagtgtc agagccgcaa accgcatccg cttgcgagcc caaatcgacc atagcaccag
    60481 acgcaatcga gccgcttgca tatgcaccgc ttgcgacacc gcccgatgcg atcgtaaccg
    60541 caccgccggc tccgcccgaa ctggcaccac cccaacccgt cgccaaaccc gaaccaccgg
    60601 aaatgacgag cgtcgtcgtg cttgacgctg taattgccgc gagaaaagtg ttagagccga
    60661 tcgtatattg ttgcgcggca cccgcttgga tcacatcacc tgtagtcgtc gtaaccgtaa
    60721 cgccgctaga cgttcccaac ttcaccgtag cagcagtggc gccggaatta taaacaacga
    60781 tagttgttcc gccgccggca ggcaacgcaa cgttcgagct tgaattagtg acagcaagcg
    60841 tcgcggtgtt cccgttggga gcaaaaccgg caaagctcgc ggtgaccgtt cccgaaacaa
    60901 tgttgacagg aagtccgaac gctgtgctga tcggctggca aatgttggga gcaacggagt
    60961 aacaaggcaa cgtcaaattc tgtgccattg tcggcaccaa aagcccgagc agaatcgcta
    61021 aagctgttaa tcctgtacgt aatgcgcgca tgctgtcctc acttactgcg cttcgatgta
    61081 caacgtatct ttgtcgtaat cacacgttgc cgaaaccgca ttgatcggag cgaacggcgc
    61141 tgatcgttcg tacgatctac cggggagcag gagataggac agcgccttgg ccggcgttcc
    61201 ctctccgacg tagatccaac agttgtgcaa cagactgttg ttattttgaa tcaaaattga
    61261 atgacgtaaa aaattttttg ccgggacgat gacggtctga aacgtgccgc ctttgtcaat
    61321 gaccttggaa aaattgtgcg tgaagggttg tgccgtctgc ggtaatgcag gatcagcaag
    61381 ccacgtgacg aaaatgatcg cagcgatgat aagaagtccg agaccccaaa cacgcatcat
    61441 gtcaagcacc atcagccgtt cgatcccgcg aagcaaaaat agttgacctt gttcgatgag
    61501 gtcgccgtct gcaccagcgt aagcgccgat gccgtgacgg tgtactgcat cgatgcgatg
    61561 ttcgtctgcc acgtcacgac gcaattgggt gcgttgagat aggcttgcgc gaacgtcgct
    61621 gtgcaccccg tcggagagcc cgtgcccatc gtgatagtcc cggagacatc gctgccggaa
    61681 acggaaggcg acgttccgca actcgtcaac gtcggcgccg ctccaagcga gcgaatgtgc
    61741 acgaggttgt cgaagtaaag attggggatg ccgagaacgg agatttgcgc gaactgactg
    61801 gcgttcgcac cttgcgtctg tgcggagaat gatgtgccgg catcgccgag aatgccggtg
    61861 ccgagccaat tcgcaagatg ggtcggcgta cacgggttgc aattgtactg ggccgattgc
    61921 gccttggcat cgacgggcag ccacagcgcg aggcaacacg cgagaacgac aagaaacttt
    61981 ttcatagctt cctcacaata gtgttcacgg caagaacgaa gagcgcgtag accgtgagcg
    62041 aaacaatttg gtgcacatta ggatcggggg tcgatgccca caaccaccat gcagacgaga
    62101 cggtgacgat cgtaaagaga tcggcgatgg cagcgatggc gcgctgactg agggcgcgta
    62161 gcgccaacat cagcatgttc tcggcgacga cgtcctgctt ttccggcggc gctttcagcg
    62221 cgaaaggacc ggcatcatca tcctcgacga ctttgaactc cgttttggcc atgtaagcta
    62281 cccgctaatt cgtggatggt gggttcccgg tcttcgtcat cctcatcgga gacgagcggt
    62341 tccttgcgca gcagcgcata gtacgcggtt accaccttaa aggctgaggc cttctcttgc
    62401 aaggtcatgt cacccttgcc agtggtgatc tctttgagca gcgctttggc tgcttcctcc
    62461 atttgaacgt cgagattttt ttcgatcatt gtgctacagc ctgtggcata tccaattgtc
    62521 cttggcgcga acgctcttgc atcatctgcc cggcagtccc gccaaaccaa ccgcccatac
    62581 gcatgcgctc tttaaggacg cgcttggcaa cctcgcgctc gatcggctcg cccttgagat
    62641 taccggcaag ccagttgaga aaattggggt gagacacgcc gtccatgatc gtcgcgaaga
    62701 ccttgccgag cagaaagcga ccggcaaaag agataccggg cacgtgcaaa atcatcgaca
    62761 cgccggtcag tttcggcaac gggatatgct gccagggatt aaggacgcgc gacgccgcag
    62821 cgagcgaacc accaacgtcg ggaccgcccg cagaaaacag gaagtccata tctttcgcca
    62881 gctgcaccat ctgcccgcgc gtcacgccgg ggaacatcaa tgcttgcact tcgtcagtga
    62941 tacccttttt gggatcgccg atctgttcga gcatcttgcc ggtctcgcca agcggacgct
    63001 ggaaaaagcg ataggcatag acttgctgca acgctttgaa ctcgggcgac tcccgtccaa
    63061 acatctgcgc agcagcgcgg atcgtatctt cctttgccag gatcttgtcg gcggcggcag
    63121 tggcaagccc gctcatcttc tcttcgtaga gaaatccaag cggttcggcg cgacgctccc
    63181 cttgcgcttt gcgaaccttg acattgtagt ccttgtcaag ccgctgcatt tcctgcgaca
    63241 acatcttgag cggatcaatg tccgccatct tcttggcaga ttgcgcggcg acctgtgccg
    63301 tcttcatcaa ctcttggatg gtgctgccct cgcgagcagc aagcggcacc gtaccattga
    63361 cggattgaat gtcctccgcc atcgctgcca atcgacgcgc agtcacttcg tcataagcgt
    63421 ttttcaacag cccgttgcgc acgagttcct gaacctgcga cgcaaacttt tggccatcat
    63481 acacgccggg cgtcaatgtg cggctctgat ccaacaggta tttggtgtgt gcgttctgca
    63541 cttgcgccca ataattatcg ccgaccattt cgcggatctt aaacatggct tccgtgtgat
    63601 caggcgcgaa caatgtgcgc gccaatgact cagggttgcc accggacccc gcccgtaatg
    63661 ctcgccgcac tgtcttgatc cgctcgtcgt cgagcatcgg tacgaactgc cgataaaaat
    63721 tgtcggctcg atcgagcatc ttcgctgctt ctttcaactg ctcgggagct ttcttatcgt
    63781 gcaaaaccgc gttgattttc ttttccaaga atatcagcga cccctgtcga atgtcagggg
    63841 tcaaatcgtt gtagtcgatg ccatagcgaa cccacgaacg cagctgccgc agctgcggcc
    63901 atgtgatttg ctcgaaatcc ttttccgttc cagcaaacgt ttgtgcgcca gcgccggttt
    63961 ccgtctcggt catttttgcg agtgtacgaa tctcattcgg gtacttgtca cgaaatgctt
    64021 gtggcaagcc atgcaaaaat gccgtcgcat catccatcaa tgacgaagta tcgggaagca
    64081 cattgccggc tgtcgcatca actgcgttat acatacgccg cgcccgtatc ttcacggcat
    64141 aagcgaactc ttcaaacttg gtaccaacca ttttccacaa cgcgccggga ttttcaccgg
    64201 catcgtgcat cttaatcgcg ctgtcgacat ccttgcgaag atgatcgagg ctttccttga
    64261 tcaaaatctc cgcttgttcc gtcatctgct tgtgcgtgga gtccaaattc tccagcaatg
    64321 cagcgtgaag cgcctgtgct ttctcaggtc cgagcccgtg cgtggtgcgc aatgttgctt
    64381 cctcgcgggc tccacggatt gcgttctcaa gttgtgcatc ggcgtgcgcc atatccttgc
    64441 gcgcggctgc caacacggct tcaccggctt tttcagaagg cactttttcg gtagctcggg
    64501 tcaacggcga tgcgatactg acatcgagca tctcgttttc gaggatcttc gtcgcttctt
    64561 tttcgtaaaa ctcttgcgct gcttgaccaa acacattctg cgcgcggaaa acagcgtcga
    64621 attcctcgat ctttttcagt cccggtgctt ccggcgcgaa cacggaaggc gggactttgc
    64681 ccccacgctc cgcaatgctc gccgcttgct tcgcgacctc gggagttgtg cccaaaaagt
    64741 aacgtgcccg atcaggcgag atgccaaaac tctcaagcac c
//
LOCUS       DATILV010001009         5783 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_510264, whole genome shotgun sequence.
ACCESSION   DATILV010001009 DATILV010000000
VERSION     DATILV010001009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5783
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_510264"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            190..1152
                     /locus_tag="VLJ17_24845"
     CDS             190..1152
                     /locus_tag="VLJ17_24845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26239.1"
                     /translation="MRTVIIVASAATALFSSPAFAQQPSQGTAAIPDFSGIWAHLTFP
                     DVEPPLSGAGPVRNLSRVTIEVARTLAPYNGAATADASPSGVSNVSELVGDFTNPILR
                     PQAAEVVKRHGEISKKKLAYPTPSNQCWPGGVPFVFWNIGMQMLQQKDKVTILYANDY
                     AVRHVYLNRTHPEHVTPSSYGDSVGQYEGDTLVVDTVGIKVGPFAMVDMYGTPHTEAL
                     HVVERYRLLDYESANEAEDRGERENFRLLVSDTGLARNPNYKGPGLLLEFTVEDPGVF
                     TTPWSARITYRRPLGSWPEFVCAESTRDHTGRTINLPHADKPDF"
     gene            1379..2341
                     /locus_tag="VLJ17_24850"
     CDS             1379..2341
                     /locus_tag="VLJ17_24850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26240.1"
                     /translation="MDWLLLIRFLTQYVAPGLAGVVVVVEIMGWLFGALVSPSATYTY
                     HFLLLIVFSLLTAIMIGICGWIVCLWDLDRLFFKLESKIDSQLAALESKSGEGGNDGT
                     LLGRARELLNKVMKGSRAMAVSAIEKSYWIDINAGGALAFPKPNIAAAVDQIEKSRRD
                     LLAPLTEIVSRSIPLGSISAPIVSRLIFMYFAPEIKVRLYRRLLLRFLSQLGALFVLT
                     AICFYISILAWSRVSGSVFFGQAGISPMNIALYQLDLMLRGALFDFMEHTRQTISPIA
                     VNRNATAFLYYTLVFRMFVAIYVMASLFRVLRFVLRRWRVLLLR"
     gene            complement(2633..4741)
                     /locus_tag="VLJ17_24855"
     CDS             complement(2633..4741)
                     /locus_tag="VLJ17_24855"
                     /inference="COORDINATES: protein motif:HMM:NF017081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MASE1 domain-containing protein"
                     /protein_id="HSV26241.1"
                     /translation="MRRILLTYVIQLSAVGAIYYFIARFGLDLASVHPSATMISPAAG
                     FAFAAVLVAGYRVVPAIFAAAFVVYALSRGPSYVAAATAASNALEAFVGGFLVNRLAA
                     GHGAFSTPTGIAKFAWIAIFAAAVGATVGATVDVSINHDLVTSSLVDSVVLAKFASAW
                     FRWWLGDLAAVLIITPVLVLWTTDRPRSFDIRPLLESGAIFTVACICGLVIFSPWTAQ
                     IPNRAPLGVLVILPLLWGALRRGPRDTATTAFILLGFVLWGAIVGGGPYGTYEESSTI
                     LLMFMIGTAMPSMALAADVALHNRSESMLRDTRLELGQVREQFAQAQKMEAVGQVTGG
                     VAHDFNNLLTVIVGNLDIAQRHLESWTEGPAERLRRVINNAMRGAQRATTITQRLLAF
                     SRKQPLDPKLLDVNTLLNGLTDFLRRSLGETVALDIVVTDGLWQVEADPIQLEAAILN
                     LAINARDAMSEGGKLTIATSNCVLDEVYAQHLEEFATGEYVQIAVSDTGTGMSKDILE
                     RVFEPFFTTKLAGQGTGLGLSQVHGFVKQSRGNIQIDSKPGKGTTVKIYLPRVLGEFP
                     VDQTARREVIENAAQTILLVEDDHDVRAYIVEILRELDFRVLEAHDAESALGIVDRND
                     VQVDLLLTDVVLPGMKCRQLVEELKGRQPGIRILYMSGYSRDDIVHQGHLDPGVELIQ
                     KPVTREVLADRIRALLDSSH"
     gene            complement(5051..5425)
                     /locus_tag="VLJ17_24860"
     CDS             complement(5051..5425)
                     /locus_tag="VLJ17_24860"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSV26242.1"
                     /translation="MMQDASKELVGRRVLVIEDESMVVMLIESLLSEIGCEVVGTASS
                     FNEALQKVKSVAFDVAILDVDLNGQPTVPIAEEFARSGVRFVFATGGALTALPDALRK
                     VPLLQKPFQREGLVRVLRTALS"
     gene            5657..>5783
                     /locus_tag="VLJ17_24865"
     CDS             5657..>5783
                     /locus_tag="VLJ17_24865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HSV26243.1"
                     /translation="MWTNENRARYDRSKLRYPSDLTDDEWKLVAPLIPPAKRGGDK"
BASE COUNT         1234 a         1684 c         1631 g         1234 t
ORIGIN      
        1 ccgaagccac cggcgcgaac ctggcagcaa ggatgccggc ggccggcatt cactcacaac
       61 tatttctttg ttgccgtcgc gtgagttggt cgcaagcggg cgaaagccaa acgtgccgat
      121 ggtccagtga atttcaaagg cagcggggtg cctgcgggca catttcggtc cgaacggaag
      181 aaatccatca tgcgaacagt catcatcgtc gcgagcgcag ccacagccct gttttcctca
      241 ccggcgttcg cgcaacagcc gagtcaaggt acagcggcga tcccggattt ctccggcata
      301 tgggcccacc tcacttttcc cgatgtcgag ccgccgctga gcggtgcggg gccggtgagg
      361 aacctttcgc gcgtgacgat cgaagtagcc cggacactgg ctccctataa tggagcggct
      421 acggccgacg cgagccccag cggcgtgagc aatgtttccg agctggtggg cgacttcacc
      481 aacccgattt tgagacccca ggcggccgag gtggtgaaac ggcacggtga aatctccaag
      541 aaaaagcttg cctaccccac gcccagcaac cagtgctggc ccggcggcgt gccgttcgtg
      601 ttttggaaca tcggcatgca aatgctgcaa cagaaggaca aagtcacgat tctctacgca
      661 aacgattatg ctgtccgcca cgtgtatctg aaccgcacgc atccggagca tgtaacgccc
      721 tcctcgtacg gagattccgt cggccagtat gagggcgaca cgcttgtagt cgacacggta
      781 ggtatcaagg tcggcccctt tgccatggtc gatatgtacg gcaccccgca taccgaggcg
      841 ctgcacgtcg tcgaacgcta ccggctgctc gactacgaat ctgctaacga agccgaggac
      901 cggggggaac gcgaaaattt tcgccttctg gtctctgaca cgggtctcgc gcgcaatccg
      961 aattacaagg gcccgggact gctgctcgag tttacagtgg aggacccagg cgtcttcaca
     1021 accccctggt cggctaggat tacgtatcgg cgcccgctgg gcagttggcc ggaattcgtc
     1081 tgcgcagaaa gcacgcgcga ccataccggc agaacgatca accttccgca tgctgacaaa
     1141 ccagatttct aagaaataga gatcggtctc ccctgaattg ggagcgtacc gaaatacgca
     1201 ctccttctct tcttgacgct cggcgtcgtg cccgcctggt ctgcgacgcg agatcgaagc
     1261 atgaccgggc gtcagcgtgg caggttggcg tagcgcatgc gctgagataa acacatctgc
     1321 tcagaagctg tttggcttgc gccggaggag tcgagcggct tatcccacgg gcgtccgcat
     1381 ggattggctt ctccttattc gatttctgac gcagtacgtt gcacccgggc tggccggtgt
     1441 cgttgtggtt gtcgagatca tgggttggct atttggggct ctagtatcgc cttctgccac
     1501 gtacacgtac cacttcttgc ttctcattgt gttctcgctc ttgacagcga tcatgatcgg
     1561 aatctgcggc tggatcgtct gcctgtggga tctcgatcgc ttgttcttca agcttgaaag
     1621 taagatcgat tcacagcttg cggcgttaga atcgaagtct ggtgaaggcg gaaacgacgg
     1681 cacgttgctc ggtcgcgcca gggagctgct caacaaggtc atgaagggca gcagagccat
     1741 ggcagtcagc gcgatcgaaa agtcttactg gatcgacatc aatgccggcg gcgcattggc
     1801 attccccaag ccgaacatcg ctgcggcggt ggatcagatc gagaaaagcc gtcgtgacct
     1861 gcttgcgcca ctcaccgaaa ttgtatcgcg ttcgattcct ctaggcagca tttcggcccc
     1921 catcgtatct cgtttgatct tcatgtattt tgcgccggag attaaggttc gcctctaccg
     1981 ccgcctgctg ttgcgattcc tgtcccagct cggcgctctc ttcgtcctta ccgcaatttg
     2041 cttttacatc agcattctcg cctggtcgcg cgtgagcggg tccgtatttt tcggtcaagc
     2101 tggcatctca ccgatgaaca tcgctcttta tcagctcgat ctgatgcttc gcggagcgct
     2161 attcgatttc atggagcata cgcgtcaaac aatctcgccg atcgccgtca atcggaacgc
     2221 aacggccttc ctctactaca cactggtgtt tcggatgttc gtcgccatct atgtgatggc
     2281 gtctctgttc agggtgctcc ggttcgttct gcggcgttgg cgagtgctgc tgcttcgata
     2341 gcatcgcgtt ttgcgccgac tccgaacggg ccatccgatg gcttcggccg cgacttcggc
     2401 acggcgatca accaccgtct aaaaccacat ttcaattgct cccgcgcccg acgcgatgcc
     2461 gaccacagag gattgaaagc ggctcaccag cgcgtacgtt tgtttcatcg ccagattctt
     2521 cgaagtaaca aaagctcgac ctgattcgcc ctgacccggt tgcgccttgc gcagcttaga
     2581 aagtccagtg cgttaccatt atcgatgcta atgacaagtt gcaccaatct tgctaatgcg
     2641 agctgtcgag aagggcgcga attctgtcgg caagaacctc ccgggtcacc ggcttttgta
     2701 tcaactcgac gccgggatca aggtgccctt ggtggacgat gtcatctcgc gaatagccgc
     2761 tcatatacaa gatcctgatc cccggttggc gccccttcaa ttcttctact agttgtcgac
     2821 atttcattcc tggcaacact acatcggtca acagtaaatc tacctggacg tcgttgcgat
     2881 caactattcc gagcgccgac tctgcgtcgt gcgcctcaag gacgcggaaa tctaattctc
     2941 gcaagatttc gacgatgtag gcgcgaacat cgtgatcgtc ctcgacgaga aggatcgtct
     3001 gggcggcatt ttcgatgacc tcccttcggg ctgtttgatc aaccgggaat tctccgagca
     3061 cgcgggggag atagattttt acggtcgttc ctttgccggg tttgctgtcg atttggatgt
     3121 tgccgcgcga ctgtttgacg aagccgtgga cctggctcag gccgaggccg gtgccctgac
     3181 cggccagctt tgtcgtgaag aaaggttcga acacccgctc cagaatgtcc ttcgacattc
     3241 cggtgccggt gtcgctgact gcgatttgca catactctcc ggtggcaaat tcctcaaggt
     3301 gctgggcgta cacttcatcg agaacgcagt tgctggtggc gatcgtcaac ttaccgcctt
     3361 cagacatggc gtcgcgggca ttgatagcga gattcaggat ggcagcctcc agttggattg
     3421 gatcggcttc gacctgccac aggccatcgg tgaccacgat atcgagagcg acggtctcgc
     3481 ccaacgagcg gcggaggaaa tcggtgagac cgtttagaag cgtgttgacg tcgagaagct
     3541 ttggatcaag gggctgtttt cgcgaaaacg ccagaaggcg ctgggtgatt gtcgttgccc
     3601 gttgagcgcc gcgcatggcg ttgttgatga cgcggcgcag ccgctccgcg ggcccttctg
     3661 tccatgactc cagatgacgt tgggcaatgt cgaggttccc gacaatgacc gtcaggaggt
     3721 tgttaaagtc atgcgccacc ccgcccgtga cttggccgac ggcttccatt ttctgcgctt
     3781 gggcgaactg ctcgcgcacc tgccccaact ccagacgggt atcgcggagc atgctctctg
     3841 agcgattgtg tagcgcaacg tcagccgcca aggccatgct tggcatggca gtgccgatca
     3901 tgaacattag caggatggtt gaagattcct catacgtgcc ataggggccg cctccaacga
     3961 tcgcgcccca aaggacgaac cccaaaagta tgaatgccgt cgtggcggta tcacgtggac
     4021 cacggcgcaa cgccccccat agcaatggca ggatgacgag aacgcccagc ggcgcccggt
     4081 taggtatttg ggccgtccac gggctgaaga tcaccagtcc gcagatgcag gccactgtaa
     4141 aaatcgcacc cgattccaac agcggccgaa tatcgaagga ccgcggtcga tccgtcgtcc
     4201 acaggacaag aaccggcgtg attatgagca ctgcggccaa atcgccaagc caccaccgga
     4261 accatgcgga tgcaaatttt gctaaaacga cgctgtcgac aagactcgag gttacgaggt
     4321 cgtggttgat acttacgtcg acggtcgcgc cgacggttgc accgacggca gcggcaaata
     4381 tggcgatcca tgcgaacttg gcgatgccgg tcggagtcga gaatgcaccg tggccggctg
     4441 ctaaacggtt gaccaaaaag ccgcccacga aagcttcgag cgcgttgctt gccgcggtcg
     4501 cggcggcaac atagcttgga ccgcgcgaaa gagcgtacac gacaaacgcc gccgcaaaaa
     4561 tcgccggtac gacacggtat cctgcgacga gaacggccgc gaaagcaaat ccagctgccg
     4621 gcgaaatcat ggtcgcgctg gggtggactg aggcaagatc gagaccgaaa cgcgcaataa
     4681 aataatagat cgcgccgaca gctgagagct gaatgacgta cgttaataat atgcggcgca
     4741 aaggcccggg tccgtgaggt cgtggaggtc ggtcggaaga cattgccgtc gcggcttcat
     4801 ccagaccaac gaaatgcaac gaaggcgagc ataacgatgg caaatttcgg accaatccag
     4861 gacctttgcc actgaatttg gcaccttagt aaattctcag tcagtgttgt ttcccggcaa
     4921 cgcgacaact cgcgcaacct ctacaggatt cgatgagctc gagcttgaag tttccggaac
     4981 gggcgcgttg cccgcagatt cgccgtgcca tgatattggg tgcttttttg gagtgcatct
     5041 aacgcccgtc ctacgacaaa gccgttcgca ggacacggac caaaccctct cgttgaaacg
     5101 gcttctgaag cagaggcacc ttgcgcaggg cgtcaggcag agccgtgagc gcacctcccg
     5161 ttgcaaacac aaaccggacc ccgctacgag caaactcctc cgcgatcggc acggtgggtt
     5221 gtccgttcaa atcgacgtcg agaatcgcaa catcgaaagc gacagatttc actttttgaa
     5281 gagcctcatt aaagctagaa gccgttccca ccacctcgca acctatctcg gaaagcaggc
     5341 tctctatcag catgacgacc atggactcgt cttcaatcac aagtacccgc cgaccgacca
     5401 gttccttgct cgcatcttgc atcatcttgc tcctcaccga ggtgattgcc gcgtacttta
     5461 tcttgattgg atgccgttac agtgcgaaca gcggcaaggc acaattcgga cataatcgag
     5521 gttcttgcgg accacgccga cgctggactg atttggcgtg ttttgcccgc atgtgagccg
     5581 ccaaaaagct gtccggtcct gcctatacta tctcaagtaa taccttacgg aggcctgact
     5641 cgccggaggt cacccgatgt ggacgaacga aaaccgcgcc cgatacgacc gcagcaagct
     5701 gagatatccg agcgatttga ctgatgatga atggaaattg gtcgccccct tgatcccacc
     5761 tgccaagcgt ggcggcgaca agc
//
LOCUS       DATILV010001010         5055 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U15753
            k141_510841, whole genome shotgun sequence.
ACCESSION   DATILV010001010 DATILV010000000
VERSION     DATILV010001010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936466
            Sequence Read Archive: SRR9648401
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 07:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,980
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,862
            CDSs (with protein)               :: 4,862
            Genes (RNA)                       :: 26
            tRNAs                             :: 23
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 38 of 92
            Pseudo Genes (incomplete)         :: 73 of 92
            Pseudo Genes (internal stop)      :: 11 of 92
            Pseudo Genes (multiple problems)  :: 28 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5055
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_510841"
                     /isolate="SMAG_U15753"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="39.0844 N 86.4705 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..208
                     /locus_tag="VLJ17_24870"
     CDS             <1..208
                     /locus_tag="VLJ17_24870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012029654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HSV26244.1"
                     /translation="ISKVVTTLKFIETHIIKMMDIWGGIEALKDFTPDAIAERSGDAK
                     LLNGPKLADDAGHASQDDIDALFN"
     gene            445..1005
                     /locus_tag="VLJ17_24875"
     CDS             445..1005
                     /locus_tag="VLJ17_24875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HSV26245.1"
                     /translation="MTEITDKPATVAPALERFVLHWGDMGGQWGVNRSVSQIHALLYL
                     SERPLTAEDVAETLGLARSNVSNSIKELLSWNLVRRVPIRGDRREHFEAEADVWEMFI
                     RIAAGRKEREIDPAIAALKFCLSEANADAKVHPVARKRLKDMLDFVETMETWYAQMLT
                     VPKSKIAGLIRLGTRIVNILPGGKAK"
     gene            1019..1705
                     /locus_tag="VLJ17_24880"
     CDS             1019..1705
                     /locus_tag="VLJ17_24880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009757970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4166 domain-containing protein"
                     /protein_id="HSV26246.1"
                     /translation="MPGAAPGHRKSNFVGEQAEQEPLERELGDLRFRALVPDLEWASL
                     PRQVRLRLSKRLTGGRTVVYVGELVETRMNVAGHLLAQAARLIGSPFPTSTDNGVPSV
                     VTVTEDLATKGQIWTRLYARRAGFPQVIHSSKRFCGPTGLEEHVGGGVGMTLTLHVEP
                     GALVFRSAGYFVDLLWHRLWLPNALTPGALSVTHKELGDGRFSFTLDVIHPRLGLLIH
                     QHAVFREIEP"
     gene            1702..3210
                     /locus_tag="VLJ17_24885"
     CDS             1702..3210
                     /locus_tag="VLJ17_24885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018647365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01777 family oxidoreductase"
                     /protein_id="HSV26247.1"
                     /translation="MTTPLWTLILAQIAMGAFDIIYHHELTERLAWRPTQRRELALHA
                     VRNVLYAVLFVTFGWFEPRGAWAALIISVLVIEIFITLMDFVEEDLSRKLPGSERINH
                     TLLAINYGAILALLIPVLLGLVAQNTSLTPVNHGVMSAIATVAAMGVIGFGARDFYTS
                     WRVRRLSSAQPDGLAQSLTGRRQLLVTGATGFVGRRLVEALTAAGHHVTVLTRDSRKA
                     ETLRPPFRVVTSLDQIANDAAIDGVINLAGEPIADGLWTRARRRRILRSRLRVTRDVV
                     RLIARLDRRPEVLISGSATGWYGLWQDEALTEFDGGKSCFTHRVCEAWERAAMRARSL
                     GVRVVLLRIGLVLGTEGGLLGRLLTPFEYGLGGPVGHGTQWMSWIERDDLVRLIAHIL
                     ATPGLGGPVNATAPEPVRNIAFVRELGRVLNRPARLRAPAALLHWLAGAFADELLIGG
                     QKVLPAKAEDSGFRFRHATLASAFDALLGAPAPHSRRPSYDTASPDKPHHTA"
     gene            complement(3242..3793)
                     /locus_tag="VLJ17_24890"
     CDS             complement(3242..3793)
                     /locus_tag="VLJ17_24890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSV26248.1"
                     /translation="MAQLCRPVSFAVVLLAPVLAGCSSVNNPFTSSVSAVPPPAAPLV
                     PPSVRAEDIVGRWGLASYHRDQDRTRTEAAAKSQCAQPYTIEASPSGGGVMMLGHDSP
                     KVQDMTLKGSVEGKTYVGPTGDPAGGDDREVVSFDGRVMILKWVDPEVAGRYGTMVLV
                     RCGAEGTESRTARVKKKSSAVPQ"
     gene            complement(3941..4438)
                     /locus_tag="VLJ17_24895"
     CDS             complement(3941..4438)
                     /locus_tag="VLJ17_24895"
                     /inference="COORDINATES: protein motif:HMM:NF015862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HSV26249.1"
                     /translation="MRAITLDEAMTIINGCFAAAKSHKLRPLTAVVLDAGGRLKAALK
                     QDGCALLRFEVAYGKAYASLSMGRPSRLVLQKQREKPVFMENLMELADGPMFLEAGGQ
                     LIRDAVGEVIGAIGVTGDAGEMDDVCAVAGIHAAGHKTCSDFTDPEVMHAVNVKEATS
                     RASKS"
     gene            4540..>5055
                     /locus_tag="VLJ17_24900"
     CDS             4540..>5055
                     /locus_tag="VLJ17_24900"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSV26250.1"
                     /translation="MTVVAKAGAAMPSQLGRWLMGALTAIRFAAAVSLVAIATVGAPA
                     SAAEPTKIRVNTFPNAKALPVHVGLAKGMFANYGLAVELENTQSSQSQRDGLAAGRFQ
                     IAHAALDNAVAMVEVAKRDVVIVSGGDSGMNEFFVQPGISSFADLRGKTIVVDAPDTA
                     YALQAKKLLLQH"
BASE COUNT          942 a         1612 c         1501 g         1000 t
ORIGIN      
        1 catcagcaaa gttgtgacca cgctcaaatt tatcgagacc cacatcatca agatgatgga
       61 catctggggc ggcatcgagg ccttgaagga cttcacgccg gacgcgatcg cggagcgaag
      121 cggcgacgcc aagttactca acggccccaa gctggccgac gacgccggcc atgcctcgca
      181 ggacgacatc gacgcactgt tcaattgagc gggccgagat ggggtgggcg ttgcgcccac
      241 aacaccgcat atctcttgcg agcccagaat ccataaccag cgaccgagat ttatggattt
      301 gcgggttcac ctcctcgccg tagcgccccg gaccgcttcc cgcctgacga aggcatcttc
      361 cttgcggcgc catgcactgc cacggctaga attcgacccg ctgtggactt gacaccaact
      421 gcagtatttg ctgtaatttc tgttatgaca gaaattacag ataagccagc aactgtcgcc
      481 cccgcattgg agcgtttcgt tcttcactgg ggcgacatgg gggggcaatg gggtgtcaac
      541 cgttcggtca gtcagatcca cgcgctgctc tatctttcgg agcgtccgct gacggctgag
      601 gacgtcgccg agaccctggg cctcgcccgc tccaatgtct cgaattccat caaggaactg
      661 ctgtcctgga acctcgtccg gcgggtgccg atccgggggg atcgccgcga gcatttcgaa
      721 gctgaggccg acgtctggga gatgttcatc cgcattgcag cgggacgcaa ggagcgcgag
      781 atcgaccccg ccatcgcggc gctcaagttc tgcctgtcag aagccaacgc agatgccaag
      841 gttcacccgg tcgcacgcaa acggctcaag gacatgctcg acttcgtcga gactatggag
      901 acttggtatg cccaaatgct cacggtgccg aagtcaaaga tcgctggact tatccggctc
      961 ggcacccgga tcgtgaacat cctgcccggc ggcaaagcca aatagcggcg accgcgtcat
     1021 gccgggcgcc gcaccaggac atcgcaaatc gaactttgta ggcgaacagg ctgaacaaga
     1081 gcctcttgaa cgtgaactcg gcgatctgcg gttccgcgcc ctggtgccgg atctcgaatg
     1141 ggcgagcctg cctcggcaag tccgccttcg gctttccaaa cgccttaccg gcggccgcac
     1201 cgtcgtctat gtaggcgaac tggtcgagac ccgcatgaac gtggcaggtc atctcctcgc
     1261 ccaggcggcg cggctgatcg gctcaccatt cccgacctca actgacaacg gcgtgccgag
     1321 cgtcgtcacc gtcaccgagg acctcgcgac caaggggcaa atctggacga ggctctatgc
     1381 ccgccgtgcc ggatttccac aggtcatcca ttcatcgaag cgcttctgtg gaccgaccgg
     1441 gctcgaagag cacgtcggcg gcggggttgg catgacgctg accttgcacg tcgaacccgg
     1501 cgcattggtg tttcgcagtg ccggctattt cgtggacctg ctttggcacc gcttgtggct
     1561 acctaacgcg ctgacacctg gagcgctgtc ggtcacccac aaggagctcg gcgatggccg
     1621 cttcagcttc actctcgatg tgattcatcc gcgtctcggc ttgcttatcc atcagcatgc
     1681 tgttttccgg gagattgaac catgacgacg ccgctgtgga ccttgattct cgcgcagatc
     1741 gctatgggcg cgttcgatat catttaccat catgagttaa ccgagcggct cgcctggcgc
     1801 ccgacacagc ggcgagagct tgcgctgcac gcggtgcgca acgtgcttta tgccgtacta
     1861 ttcgtcacct tcggctggtt cgaaccgcgc ggcgcctggg cggccctcat catttcggtg
     1921 ctggtcatcg agatcttcat caccctcatg gatttcgtcg aggaagacct aagtcgcaaa
     1981 ctgccaggaa gcgagcgcat caaccacacg ctgcttgcca tcaattacgg cgcaattctg
     2041 gcactgctga ttccggtgtt gctcggcttg gtggcgcaga acacgtcact tactccggtc
     2101 aatcacggcg tgatgagcgc tatcgcgacc gtcgcggcca tgggagtaat cggattcggt
     2161 gctcgcgact tctacacatc atggcgtgtg cggcgtttgt cgtcggcaca acctgacgga
     2221 ctggcgcaat ctctcacagg ccgacgacag ctgctcgtga ccggtgcgac cggattcgtc
     2281 ggccgtagac tggtcgaggc actgacggcg gctggtcacc atgtaacggt gctgacgcgc
     2341 gattcgcgca aggctgagac gttgcggccg ccgttccgag tcgtcacctc gctcgatcag
     2401 atcgcgaacg atgctgcaat cgacggggtc atcaatctcg cgggcgagcc tatcgccgat
     2461 ggattgtgga cgcgcgcgcg gcgccgccgt atcctgcgat cgcgtctccg cgtcacccga
     2521 gacgtggtgc ggttgatcgc ccgcctcgat agacgtcctg aagtgctgat cagtggttct
     2581 gccacaggtt ggtatgggct gtggcaggac gaagccctga cggaattcga cggcggaaaa
     2641 tcctgcttca cccaccgggt ctgcgaagcc tgggaacgcg ccgccatgcg ggcgcgttcc
     2701 cttggcgttc gggtcgtatt actgcgaatc ggtctcgtgc ttggaaccga gggcggcttg
     2761 ttgggccgcc ttttgacccc gttcgaatac ggcctcggcg gccccgttgg ccacggtacc
     2821 caatggatgt catggatcga gcgcgacgat ctggtgcgcc tgatcgctca tatactggcc
     2881 acaccaggcc ttggcggccc ggtcaatgcc accgcgccgg agccggtgcg taacattgct
     2941 tttgtccgtg agcttggccg cgtcctcaac cgacccgccc ggctgcgtgc gccggccgca
     3001 ctgctacact ggctcgcagg cgcctttgct gatgaactgc tgatcggtgg gcaaaaggtg
     3061 ctgccggcaa aagccgagga cagcggattt cggttccggc atgctacgct ggcaagcgcc
     3121 tttgacgccc tgctgggtgc gccagcgccg cactcacgtc gaccgtctta cgataccgct
     3181 tcccccgata agccgcatca caccgcatga cgtcgaccgg ttcggcctgt gccggacaca
     3241 ctcactgcgg tacggcagac gatttcttct taacccgcgc cgtacgcgac tccgttccct
     3301 ccgccccgca acgcaccaac accatggtac cgtaacgacc agcaacttcg ggatcaaccc
     3361 acttcaagat catcaccctc ccgtcgaagc tcaccacctc gcgatcgtcg ccgccggcgg
     3421 gatcaccggt cgggccgaca taggttttgc cctcgacgct acccttgaga gtcatgtcct
     3481 gcaccttggg gctgtcatgg cccagcatca tgacgccgcc gccagacggt gaagcttcga
     3541 tcgtataggg ctgtgcacac tggcttttcg ccgcagcttc ggtgcgcgtg cgatcttggt
     3601 cgcggtggta ggaagcgagg ccccaacggc cgacgatatc ttccgcgcga acgctcggcg
     3661 gaacgagcgg cgcagcgggc ggcggcactg ccgagaccga cgaggtaaaa ggattgttga
     3721 cgctgctgca accggcaagc accggcgcca aaaggacgac cgcaaaggat acggggcggc
     3781 acaattgggc catcgggatg gtctcctcgc aaaaattcgt cgccacattg cgtggccttg
     3841 gcgataagcg caagggcgct acccacagtc tcgtggcccc ccgttagcac actgcgccgc
     3901 ggcaaacgac tctcaaagtg gtttcaacta agccgaggca tcatgatttc gacgctcgtg
     3961 atgtcgcttc cttaacattg acggcgtgca tgacttctgg atcggtaaaa tccgagcaag
     4021 tcttgtggcc ggccgcgtga atgccagcca ctgcacagac atcgtccatt tcgcccgcat
     4081 caccggtgac acctatggct cctatgacct ctccgactgc gtcccggata agttggccgc
     4141 ctgcctctag gaacatcggc ccatcggcca attccatcag attttccatg aacaccggct
     4201 tctcacgctg cttctgcagc acaagacgcg atggccgtcc cattgacagg gacgcatagg
     4261 ccttaccgta tgcgacctca aatcgcagca gggcacagcc gtcctgttta agcgccgcct
     4321 tcagccggcc gccagcgtcc aagaccacgg ccgtcagcgg cctcaatttg tgcgacttcg
     4381 cggccgcaaa gcatccgttg atgattgtca tcgcttcatc gagggtgatt gcgcgcattc
     4441 cggtttcctt catgtcgcca cgcggtgcta ttctggtgtt tagggccaca atgaatgcgt
     4501 gaaatgcgga ggtgtcaaat gtcgttgccg gcgagatcca tgacagttgt cgcgaaggcg
     4561 ggcgcggcga tgccaagcca gctcggtcgg tggctcatgg gagctttgac ggccatccga
     4621 ttcgccgctg ccgtgtcact cgtcgccatt gcgaccgtgg gcgccccggc gagcgctgcc
     4681 gaacccacga aaatccgggt caacaccttt ccgaacgcca aggcgttgcc ggtccatgtg
     4741 ggcctcgcca agggaatgtt cgccaattac gggcttgcgg tcgagttgga gaatacccaa
     4801 agctcgcaaa gccagcgcga cggacttgca gccggccgct tccagatcgc ccacgccgcc
     4861 ctcgacaatg cggtcgccat ggtcgaggtg gccaagcgcg atgtcgtcat cgtgtccggc
     4921 ggcgacagcg gtatgaacga gtttttcgtg cagcctggga tttcgtcgtt tgcagatctc
     4981 cggggcaaga cgatcgtggt cgatgcgccc gacaccgcct atgcgctgca ggcgaagaag
     5041 ctccttctgc agcac
//
